Query 000121
Match_columns 2150
No_of_seqs 253 out of 327
Neff 6.3
Searched_HMMs 29240
Date Mon Mar 25 17:42:19 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/000121.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/000121hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4fdd_A Transportin-1; heat rep 72.6 2.7E+02 0.0092 37.5 26.0 54 1556-1609 378-431 (852)
2 2of3_A ZYG-9; multifunctional 71.8 13 0.00044 43.8 10.2 85 1109-1193 64-161 (266)
3 2qk2_A LP04448P; mini spindles 61.6 20 0.00068 40.8 9.1 87 1108-1194 115-206 (242)
4 4fdd_A Transportin-1; heat rep 60.9 4.3E+02 0.015 35.5 26.7 288 1704-2049 378-702 (852)
5 1b3u_A Protein (protein phosph 48.1 2.6E+02 0.0088 35.3 17.2 30 1164-1193 281-310 (588)
6 4ffb_C Protein STU2; tubulin f 41.3 85 0.0029 36.4 10.2 84 1110-1193 122-212 (278)
7 4b8j_A Importin subunit alpha- 40.0 86 0.0029 39.7 10.8 28 816-843 161-188 (528)
8 2vgl_B AP-2 complex subunit be 39.3 7.3E+02 0.025 31.9 22.1 84 1926-2012 337-422 (591)
9 2qk1_A Protein STU2; STU2P, XM 36.7 1.9E+02 0.0066 33.1 12.1 87 1109-1195 122-222 (249)
10 2qk2_A LP04448P; mini spindles 36.0 1.6E+02 0.0053 33.2 11.1 121 1026-1191 30-160 (242)
11 2bpt_A Importin beta-1 subunit 35.1 9.3E+02 0.032 31.8 34.0 430 1556-2047 243-712 (861)
12 1u6g_C TIP120 protein, CAND1; 33.7 5.8E+02 0.02 35.9 18.7 243 1693-2032 56-308 (1230)
13 2bpt_A Importin beta-1 subunit 31.7 1E+03 0.035 31.3 29.6 398 1555-2030 387-835 (861)
14 2jdq_A Importin alpha-1 subuni 28.6 3.7E+02 0.013 32.6 13.5 263 816-1191 108-388 (450)
15 1b3u_A Protein (protein phosph 25.0 2.6E+02 0.0088 35.3 11.5 88 1706-1798 147-234 (588)
16 3u0r_A Apoptosis inhibitor 5; 21.4 4.2E+02 0.014 33.7 11.6 117 1921-2044 7-124 (507)
No 1
>4fdd_A Transportin-1; heat repeats, karyopherin, nuclear import, protein transport importin, transportin, transport protein; 2.30A {Homo sapiens} PDB: 2ot8_A 2h4m_A 2z5k_A 2z5j_A 2qmr_A 2z5m_A 2z5n_A 2z5o_A 1qbk_B*
Probab=72.64 E-value=2.7e+02 Score=37.52 Aligned_cols=54 Identities=15% Similarity=0.102 Sum_probs=40.5
Q ss_pred HHHHHHHHhhccchhhhhhhhhHHHHHHhhcccCCchhHHHHHHHHHHHHHHHH
Q 000121 1556 IALILLAEIAYENDEDFREHLPLLFHVTFVSMDSSEDIVLEHCQHLLVNLLYSL 1609 (2150)
Q Consensus 1556 lalifL~dl~~~~~~d~~~~LP~LlH~v~ll~Dh~~~~Vre~~~~LLvnLih~L 1609 (2150)
-|+..|..++-........++|.++-.++-++.+..+.||..|-..+-++...+
T Consensus 378 aa~~alg~i~~~~~~~~~~~l~~~l~~l~~~l~d~~~~Vr~~a~~~l~~l~~~~ 431 (852)
T 4fdd_A 378 SGILVLGAIAEGCMQGMIPYLPELIPHLIQCLSDKKALVRSITCWTLSRYAHWV 431 (852)
T ss_dssp HHHHHHHHTTTTTHHHHGGGHHHHHHHHHHHTTCSSHHHHHHHHHHHHHTHHHH
T ss_pred HHHHHHHHHHhcchHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHh
Confidence 455556666544455667899999999998899999999998877777665444
No 2
>2of3_A ZYG-9; multifunctional macromolecule, kinetochore, microtubule, XMAP215, STU2, DIS1, microtubule associated protein, structural protein; 1.90A {Caenorhabditis elegans}
Probab=71.84 E-value=13 Score=43.83 Aligned_cols=85 Identities=16% Similarity=0.178 Sum_probs=65.3
Q ss_pred HHHHHHHHHHHHhccc--------hHHHHHHhhhcCCccchhhHHHHHHHHH---hhcCCCCCcH--HHHHHHHHHhccC
Q 000121 1109 ALAKLALKNLLLTNLD--------LFPACIDQCYYSDAAIADGYFSVLAEVY---MRQEIPKCEI--QRLLSLILYKVVD 1175 (2150)
Q Consensus 1109 ~lgr~AL~nLL~~N~~--------Ll~~~I~rCY~~~~~va~~yF~vl~ev~---~~~~~~~~d~--~~LL~L~L~~lgs 1175 (2150)
.-|-..|...+..|++ ++.|+.-|.+.+++.+....+.+|..++ .+.++.--+. ..++...+-++|+
T Consensus 64 ~~ale~L~~~l~~~~~~~~~~lDll~kw~~lr~~d~N~~v~~~~L~~L~~l~~~l~~~~y~~~~~ea~~~lP~LveKlGd 143 (266)
T 2of3_A 64 LAALDSLVRLADTSPRSLLSNSDLLLKWCTLRFFETNPAALIKVLELCKVIVELIRDTETPMSQEEVSAFVPYLLLKTGE 143 (266)
T ss_dssp HHHHHHHHHHHHHCHHHHHHTHHHHHHHHHHHTTSCCHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHGGGC
T ss_pred HHHHHHHHHHhhhChHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHhCC
Confidence 4577788888887773 4788888888888888878887776654 4555543332 4688888899999
Q ss_pred CChhHHHHHHHHHHHHhh
Q 000121 1176 PSRQIRDDALQMLETLSV 1193 (2150)
Q Consensus 1176 ~~~~IR~~A~~LL~~L~~ 1193 (2150)
.+..+|+.+.++|..+..
T Consensus 144 ~k~~vR~~~r~il~~l~~ 161 (266)
T 2of3_A 144 AKDNMRTSVRDIVNVLSD 161 (266)
T ss_dssp SSHHHHHHHHHHHHHHHH
T ss_pred ChHHHHHHHHHHHHHHHH
Confidence 999999999999998853
No 3
>2qk2_A LP04448P; mini spindles, MSPS, XMAP215, DIS1, STU2, heat repeat, micro plus END, +TIP, protein binding; 2.10A {Drosophila melanogaster}
Probab=61.62 E-value=20 Score=40.76 Aligned_cols=87 Identities=14% Similarity=0.192 Sum_probs=61.8
Q ss_pred hHHHHHHHHHHHHhcc--chHHHHHHhhhcCCccchhhHHHHHHHHHhhcC---CCCCcHHHHHHHHHHhccCCChhHHH
Q 000121 1108 VALAKLALKNLLLTNL--DLFPACIDQCYYSDAAIADGYFSVLAEVYMRQE---IPKCEIQRLLSLILYKVVDPSRQIRD 1182 (2150)
Q Consensus 1108 ~~lgr~AL~nLL~~N~--~Ll~~~I~rCY~~~~~va~~yF~vl~ev~~~~~---~~~~d~~~LL~L~L~~lgs~~~~IR~ 1182 (2150)
++-+..||.++..... .++..+....-..++.+.......|..++.... ...-....++....-.+.+++.+||.
T Consensus 115 r~~a~~aL~~~~~~~~~~~ll~~l~~~l~~~~~~vr~~~l~~l~~~l~~~~~~~~~~~~l~~l~p~l~~~l~D~~~~VR~ 194 (242)
T 2qk2_A 115 VTALREAIDAIYASTSLEAQQESIVESLSNKNPSVKSETALFIARALTRTQPTALNKKLLKLLTTSLVKTLNEPDPTVRD 194 (242)
T ss_dssp HHHHHHHHHHHHTTSCHHHHHHHHHHHTTCSCHHHHHHHHHHHHHHHTTCCGGGCCHHHHHHHHHHHHHHHTSSCHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHcCCCCccHHHHHHHHHHHHHHhcCCChHHHH
Confidence 4678888888887532 356666555545566777777888888776542 11112346788877888999999999
Q ss_pred HHHHHHHHHhhh
Q 000121 1183 DALQMLETLSVR 1194 (2150)
Q Consensus 1183 ~A~~LL~~L~~r 1194 (2150)
.|...|..+...
T Consensus 195 ~A~~~l~~l~~~ 206 (242)
T 2qk2_A 195 SSAEALGTLIKL 206 (242)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 999999998543
No 4
>4fdd_A Transportin-1; heat repeats, karyopherin, nuclear import, protein transport importin, transportin, transport protein; 2.30A {Homo sapiens} PDB: 2ot8_A 2h4m_A 2z5k_A 2z5j_A 2qmr_A 2z5m_A 2z5n_A 2z5o_A 1qbk_B*
Probab=60.89 E-value=4.3e+02 Score=35.52 Aligned_cols=288 Identities=9% Similarity=0.027 Sum_probs=148.7
Q ss_pred HHHHHHhhcCCCCCh---HHHHHHHHHHHHhhcCCCCChhhHHHHHHHHHHHHHhccCCCcccchhhHHHHHHhhccCCc
Q 000121 1704 RSHQIYRALRPSVTS---DTCVLLLRCLHRCLGNPIPPVLGFIMEILMTLQVMVENMEPEKVILYPQLFWGCVAMMHTDF 1780 (2150)
Q Consensus 1704 RSfQVfr~L~~~vd~---~~l~~lL~rL~~tis~~~~d~q~f~~eIL~TL~~iv~~l~~~~~~~~pQLFW~avA~L~s~~ 1780 (2150)
-+...++.|....+. ..+.+++..|.+.+.|+++.++.-+...|..+...+..-. .. .++++++=..+.+|+..+
T Consensus 378 aa~~alg~i~~~~~~~~~~~l~~~l~~l~~~l~d~~~~Vr~~a~~~l~~l~~~~~~~~-~~-~~~~~ll~~L~~~L~d~~ 455 (852)
T 4fdd_A 378 SGILVLGAIAEGCMQGMIPYLPELIPHLIQCLSDKKALVRSITCWTLSRYAHWVVSQP-PD-TYLKPLMTELLKRILDSN 455 (852)
T ss_dssp HHHHHHHHTTTTTHHHHGGGHHHHHHHHHHHTTCSSHHHHHHHHHHHHHTHHHHHHSC-TT-TTHHHHHHHHHHHHTCSS
T ss_pred HHHHHHHHHHhcchHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhccch-HH-HHHHHHHHHHHHHHhCCC
Confidence 345555666654332 2467788888888888877777666666555555443322 12 246666666677777666
Q ss_pred HHHHHHHHHHHHHHhhhcCCCChhhHHHHhhCCCCCCcccCCCCCcccccccCCCCCCCCCCCCCCCcchHHHHhhccCC
Q 000121 1781 VHVYCQVLELFSRVIDRLSFRDRTTENVLLSSMPRDELDTDGDTGDFQRTESRGYELPPTSGTLPKFEGVQPLVLKGLMS 1860 (2150)
Q Consensus 1781 e~eF~~al~LL~~~L~~ld~~d~~~~~~Ll~~~P~~~~~~~~~~~~l~~l~~~G~~~~~~~~~~~~F~glq~lllKGlrs 1860 (2150)
...=..|+.-|..+....+- .+ .+-++.+.+.+++.+..
T Consensus 456 ~~vr~~a~~aL~~l~~~~~~---~l--------------------------------------~~~l~~ll~~L~~~l~~ 494 (852)
T 4fdd_A 456 KRVQEAACSAFATLEEEACT---EL--------------------------------------VPYLAYILDTLVFAFSK 494 (852)
T ss_dssp HHHHHHHHHHHHHHHHHHGG---GG--------------------------------------GGGHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhhH---hh--------------------------------------HhHHHHHHHHHHHHHHH
Confidence 66666777777666654420 00 01234566666666654
Q ss_pred CCCh--hHHHHHHHHhhccCCCccccCCchhHHHHHHHHhhHHHHhhccCCCCCCCCchhHHHHHHHHHHHHHHHHHHhC
Q 000121 1861 TVSH--GVSIEVLSQITVHSCDSIFGDAETRLLMHITGLLPWLCLQLGKDAVVGPASPLQQQYQKACSVASNIALWCRAK 1938 (2150)
Q Consensus 1861 s~t~--~~tl~~L~~L~~~~~~~lig~~~~rll~~~la~LP~~l~~~~~~~~~~~~~~~~~~~~~~~~~A~~la~~~~~~ 1938 (2150)
.... ...++.+..+... +|+.-.. .-++-.++|.++..+..-.. +.+. .. .+-+.|..+|...
T Consensus 495 ~~~~~~~~~~~ai~~l~~~-----~~~~~~~-~~~~~~l~p~l~~~~~~l~d---~~~~---~~---~~~~~l~~i~~~~ 559 (852)
T 4fdd_A 495 YQHKNLLILYDAIGTLADS-----VGHHLNK-PEYIQMLMPPLIQKWNMLKD---EDKD---LF---PLLECLSSVATAL 559 (852)
T ss_dssp CCHHHHHHHHHHHHHHHHH-----HGGGGCC-HHHHHHHHHHHHHHHHHSCT---TCTT---HH---HHHHHHHHHHHHH
T ss_pred hChHHHHHHHHHHHHHHHH-----hhhhhcc-HHHHHHHHHHHHHHHHhccc---ccHH---HH---HHHHHHHHHHHHH
Confidence 4322 2234555555432 2221100 12344667876654421100 1111 11 2234455555443
Q ss_pred CC---ChHHHHHH----HHhc-----------c-cccc-hhhHHH-------hHHHhhhhhccccc-chHHHHHHHHHHh
Q 000121 1939 SL---DELGTVFV----AYSR-----------G-EIKS-IDNLLA-------CVSPLLWNEWFPKH-SALAFGHLLRLLE 1990 (2150)
Q Consensus 1939 ~~---~~La~vl~----~~a~-----------~-~f~~-~~dfl~-------~~~~~l~~~~fp~~-~~~~l~~L~~lL~ 1990 (2150)
|. +-+..++. .+.. . .+.. .++|.. .++..+-..+.|-. +...+..++..+.
T Consensus 560 g~~~~~~~~~i~~~~~~~l~~~l~~~~~~~~~~~~~~~~d~~~~~~~l~~l~~l~~~l~~~~~~~~~~~~~~~~l~~~l~ 639 (852)
T 4fdd_A 560 QSGFLPYCEPVYQRCVNLVQKTLAQAMLNNAQPDQYEAPDKDFMIVALDLLSGLAEGLGGNIEQLVARSNILTLMYQCMQ 639 (852)
T ss_dssp GGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTTSCCCCTHHHHHHHHHHHHHHHHHGGGGHHHHHTCCHHHHHHHHTT
T ss_pred hHhHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcccCCCcchHHHHHHHHHHHHHHHHhHhHHHHhcCCcHHHHHHHHhC
Confidence 31 22222222 1111 0 2222 234443 34444433333321 2346778888887
Q ss_pred cCChHHHHHHHHHHHHhhcCCCCC-CCCchhhHHHHHHHhcCcC---HHHHHHHHHHHHhccc
Q 000121 1991 KGPVEYQRVILLMLKALLQHTPMD-ASQSPHMYAIVSQLVESTL---CWEALSVLEALLQSCS 2049 (2150)
Q Consensus 1991 ~~~~~~~~~~l~iL~~ll~~~~~~-~~~~~~l~~~l~rll~t~~---~~eAL~VL~~v~~~s~ 2049 (2150)
......++.....|..+....+-. ....++++..+.+.|..+. +..|...+..+....+
T Consensus 640 ~~~~~vr~~a~~~l~~l~~~~~~~~~~~l~~~lp~l~~~l~~~~~~v~~~a~~alg~i~~~~~ 702 (852)
T 4fdd_A 640 DKMPEVRQSSFALLGDLTKACFQHVKPCIADFMPILGTNLNPEFISVCNNATWAIGEISIQMG 702 (852)
T ss_dssp CSSHHHHHHHHHHHHHHHHHCGGGTGGGHHHHHHHHHHTCCTTSHHHHHHHHHHHHHHHHHHG
T ss_pred CCChhHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHcCccchHHHHHHHHHHHHHHHHhh
Confidence 656778888888888777655432 2234567767778886643 5677777777665543
No 5
>1b3u_A Protein (protein phosphatase PP2A); scaffold protein, phosphorylation, heat repeat; 2.30A {Homo sapiens} SCOP: a.118.1.2 PDB: 2ie4_A* 2ie3_A* 2npp_A* 3k7v_A* 3k7w_A* 3fga_A* 2pf4_A 2iae_A 2nym_A* 2nyl_A* 3dw8_A* 2pkg_A 3c5w_A
Probab=48.07 E-value=2.6e+02 Score=35.26 Aligned_cols=30 Identities=13% Similarity=0.155 Sum_probs=23.2
Q ss_pred HHHHHHHHhccCCChhHHHHHHHHHHHHhh
Q 000121 1164 RLLSLILYKVVDPSRQIRDDALQMLETLSV 1193 (2150)
Q Consensus 1164 ~LL~L~L~~lgs~~~~IR~~A~~LL~~L~~ 1193 (2150)
.++...+-.+.+++.++|..|...|..+..
T Consensus 281 ~l~~~l~~~l~d~~~~vr~~a~~~l~~~~~ 310 (588)
T 1b3u_A 281 DLVPAFQNLMKDCEAEVRAAASHKVKEFCE 310 (588)
T ss_dssp THHHHHHHHHTCSSHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCcHHHHHHHHHHHHHHHH
Confidence 355555566789999999999999888743
No 6
>4ffb_C Protein STU2; tubulin fold, heat repeats, cytoskeleton, microtubule, tubul domain, hydrolase; HET: GTP; 2.88A {Saccharomyces cerevisiae}
Probab=41.31 E-value=85 Score=36.40 Aligned_cols=84 Identities=8% Similarity=0.062 Sum_probs=54.5
Q ss_pred HHHHHHHHHHHhc--cc-hHHHHHHhhhcCCccchhhHHHHHHHHHhhcCCCCCcHHHHH----HHHHHhccCCChhHHH
Q 000121 1110 LAKLALKNLLLTN--LD-LFPACIDQCYYSDAAIADGYFSVLAEVYMRQEIPKCEIQRLL----SLILYKVVDPSRQIRD 1182 (2150)
Q Consensus 1110 lgr~AL~nLL~~N--~~-Ll~~~I~rCY~~~~~va~~yF~vl~ev~~~~~~~~~d~~~LL----~L~L~~lgs~~~~IR~ 1182 (2150)
-+..+|..+.+.- .+ +++.++.-.=..+|.+...+...|++++.+.....+++...+ -.+.-.++|.|.+||.
T Consensus 122 ~a~~~l~~~~~~~~~~~~~~e~l~~~l~~Knpkv~~~~l~~l~~~l~~fg~~~~~~k~~l~~i~~~l~k~l~d~~~~VR~ 201 (278)
T 4ffb_C 122 QSMSCILSLCGLDTSITQSVELVIPFFEKKLPKLIAAAANCVYELMAAFGLTNVNVQTFLPELLKHVPQLAGHGDRNVRS 201 (278)
T ss_dssp HHHHHHHHHHHTSSSSHHHHHHHGGGGGCSCHHHHHHHHHHHHHHHHHHTTTTCCHHHHHHHHGGGHHHHHTCSSHHHHH
T ss_pred HHHHHHHHHHHhcCcHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHhCCCcCCchhHHHHHHHHHHHHHhCCcHHHHH
Confidence 4455555444432 12 333333322235677888999999999987655555654433 3334467999999999
Q ss_pred HHHHHHHHHhh
Q 000121 1183 DALQMLETLSV 1193 (2150)
Q Consensus 1183 ~A~~LL~~L~~ 1193 (2150)
.|.+++..+..
T Consensus 202 aA~~l~~~ly~ 212 (278)
T 4ffb_C 202 QTMNLIVEIYK 212 (278)
T ss_dssp HHHHHHHHHHT
T ss_pred HHHHHHHHHHH
Confidence 99999999853
No 7
>4b8j_A Importin subunit alpha-1A; transport protein, nuclear localization signal; 2.00A {Oryza sativa japonica group} PDB: 4b8o_A 2yns_A 4b8p_A
Probab=40.02 E-value=86 Score=39.67 Aligned_cols=28 Identities=25% Similarity=0.189 Sum_probs=23.8
Q ss_pred HHHHHcccccCCChhHHHHHHHHhCCCC
Q 000121 816 LYHFIFPSLKSGSEAHIHAATMALGHSH 843 (2150)
Q Consensus 816 LFk~vvPlL~se~~~iRdAvV~aLG~in 843 (2150)
....++.+|++++..+|+.++.+||.+.
T Consensus 161 ~i~~L~~lL~~~~~~v~~~a~~aL~~l~ 188 (528)
T 4b8j_A 161 AVPIFVKLLGSSSDDVREQAVWALGNVA 188 (528)
T ss_dssp HHHHHHHHTTCSCHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHhcCCCHHHHHHHHHHHHHHh
Confidence 4457778889999999999999999883
No 8
>2vgl_B AP-2 complex subunit beta-1; cytoplasmic vesicle, alternative splicing, endocytosis, lipid-binding, golgi apparatus, adaptor, membrane, transport; HET: IHP; 2.59A {Homo sapiens} SCOP: i.23.1.1 PDB: 2jkt_B 2jkr_B* 2xa7_B 1w63_B
Probab=39.32 E-value=7.3e+02 Score=31.85 Aligned_cols=84 Identities=6% Similarity=0.068 Sum_probs=52.4
Q ss_pred HHHHHHHHHHHhCCCChHHHHHHHHhcccccchhhHHHhHHHhhhhh--cccccchHHHHHHHHHHhcCChHHHHHHHHH
Q 000121 1926 SVASNIALWCRAKSLDELGTVFVAYSRGEIKSIDNLLACVSPLLWNE--WFPKHSALAFGHLLRLLEKGPVEYQRVILLM 2003 (2150)
Q Consensus 1926 ~~A~~la~~~~~~~~~~La~vl~~~a~~~f~~~~dfl~~~~~~l~~~--~fp~~~~~~l~~L~~lL~~~~~~~~~~~l~i 2003 (2150)
...+.|..+|++.+...+-.-|..|.+. ...+|-+.++..|+.- -||.....++.+|+.+|..........+...
T Consensus 337 ~al~~L~~l~~~~nv~~iv~~L~~~l~~---~d~~~r~~~v~aI~~la~~~~~~~~~~v~~Ll~ll~~~~~~v~~e~i~~ 413 (591)
T 2vgl_B 337 EKLDIMIRLASQANIAQVLAELKEYATE---VDVDFVRKAVRAIGRCAIKVEQSAERCVSTLLDLIQTKVNYVVQEAIVV 413 (591)
T ss_dssp HHHHHHHHTCCSSTHHHHHHHHHHHTTS---SCHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTCCHHHHHHHHHH
T ss_pred HHHHHHHHHCChhhHHHHHHHHHHHHhc---CCHHHHHHHHHHHHHHHHhChhHHHHHHHHHHHHHcccchHHHHHHHHH
Confidence 3345566666555444444445556543 2467777776666421 2455556788999999987766666666777
Q ss_pred HHHhhcCCC
Q 000121 2004 LKALLQHTP 2012 (2150)
Q Consensus 2004 L~~ll~~~~ 2012 (2150)
|+.+++..+
T Consensus 414 l~~ii~~~p 422 (591)
T 2vgl_B 414 IRDIFRKYP 422 (591)
T ss_dssp HHHHHHHSC
T ss_pred HHHHHHHCc
Confidence 777776533
No 9
>2qk1_A Protein STU2; STU2P, XMAP215, DIS1, TOG, CH-TOG, heat repeat, microtubule plus END, +TIP, protein binding; 1.70A {Saccharomyces cerevisiae}
Probab=36.67 E-value=1.9e+02 Score=33.12 Aligned_cols=87 Identities=10% Similarity=0.066 Sum_probs=59.2
Q ss_pred HHHHHHHHHHHHhc------c---chHHHHHHhhhcCCccchhhHHHHHHHHHhhcCCCCC----cH-HHHHHHHHHhcc
Q 000121 1109 ALAKLALKNLLLTN------L---DLFPACIDQCYYSDAAIADGYFSVLAEVYMRQEIPKC----EI-QRLLSLILYKVV 1174 (2150)
Q Consensus 1109 ~lgr~AL~nLL~~N------~---~Ll~~~I~rCY~~~~~va~~yF~vl~ev~~~~~~~~~----d~-~~LL~L~L~~lg 1174 (2150)
+-+..||.++.++- + ++++..+.-.=++++++.......|+.++......+- .. .+++....-.+.
T Consensus 122 ~aa~~al~~i~~~~~~~~~~~~l~~ll~~l~~~l~~k~~~vk~~al~~l~~~~~~~~~~~~~l~~~l~~~iip~l~~~l~ 201 (249)
T 2qk1_A 122 EAIRKALLTICKYYDPLASSGRNEDMLKDILEHMKHKTPQIRMECTQLFNASMKEEKDGYSTLQRYLKDEVVPIVIQIVN 201 (249)
T ss_dssp HHHHHHHHHHHHHSCTTCTTCTTHHHHHHHHHHTTCSSHHHHHHHHHHHHHHHHHCCSCSHHHHHHHTTTHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHccccccCCcHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHcCCcchhHHHHHHHHHHHHHHHHhc
Confidence 56788999999864 2 2444444322224566778888888888876553211 12 456666667779
Q ss_pred CCChhHHHHHHHHHHHHhhhh
Q 000121 1175 DPSRQIRDDALQMLETLSVRE 1195 (2150)
Q Consensus 1175 s~~~~IR~~A~~LL~~L~~r~ 1195 (2150)
+++.+||..|+..|..+....
T Consensus 202 D~~~~VR~aA~~~l~~i~~~v 222 (249)
T 2qk1_A 202 DTQPAIRTIGFESFAILIKIF 222 (249)
T ss_dssp CSSHHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHh
Confidence 999999999999999996543
No 10
>2qk2_A LP04448P; mini spindles, MSPS, XMAP215, DIS1, STU2, heat repeat, micro plus END, +TIP, protein binding; 2.10A {Drosophila melanogaster}
Probab=36.04 E-value=1.6e+02 Score=33.19 Aligned_cols=121 Identities=12% Similarity=0.217 Sum_probs=78.7
Q ss_pred HHHHHHHHHHHHhhcC-CCcCCcccccchhHHHHHHHhhc-CCCCCCCCCCCCCCCCCCCcCCccCCCCCCCcccccccC
Q 000121 1026 AIQWASMNAMASLLYG-PCFDDNARKMSGRVISWINSLFI-EPAPRAPFGYSPADPRTPSYSKHAGEGGRGAASRDRHRG 1103 (2150)
Q Consensus 1026 ~L~~aAl~AMAaLc~G-p~fd~~~~~~~g~ll~WId~lf~-s~~~~~~~~~sp~~~~~~s~~k~~~e~~~~~~~~~~~~~ 1103 (2150)
+.+.+|+.++..++.| |-+.... -+.+..-+-.++. .++..
T Consensus 30 ~~R~~a~~~L~~l~~~~~~~~~~~---~~~i~~~L~~~l~kd~~~~---------------------------------- 72 (242)
T 2qk2_A 30 TLRKESLEVLEKLLTDHPKLENGE---YGALVSALKKVITKDSNVV---------------------------------- 72 (242)
T ss_dssp HHHHHHHHHHHHHHHHCSSBCCCC---CHHHHHHHHHHHHHCSCHH----------------------------------
T ss_pred HHHHHHHHHHHHHHccCCCCCCCC---HHHHHHHHHHHhccCCCHH----------------------------------
Confidence 4567889999999965 5332211 2356666666663 32211
Q ss_pred CchhhHHHHHHHHHHHHhcc--------chHHHHHHhhhcCCccchhhHHHHHHHHHhhcCCCCCcHHHHHHHHHHhccC
Q 000121 1104 GHHRVALAKLALKNLLLTNL--------DLFPACIDQCYYSDAAIADGYFSVLAEVYMRQEIPKCEIQRLLSLILYKVVD 1175 (2150)
Q Consensus 1104 ~~~~~~lgr~AL~nLL~~N~--------~Ll~~~I~rCY~~~~~va~~yF~vl~ev~~~~~~~~~d~~~LL~L~L~~lgs 1175 (2150)
....+..+|..|...-. .++..++++.=...+.+.+....++..++.. +++..++...+-.+.+
T Consensus 73 ---V~~~a~~~l~~la~~l~~~~~~~~~~ilp~ll~~l~d~~~~vr~~a~~aL~~~~~~-----~~~~~ll~~l~~~l~~ 144 (242)
T 2qk2_A 73 ---LVAMAGKCLALLAKGLAKRFSNYASACVPSLLEKFKEKKPNVVTALREAIDAIYAS-----TSLEAQQESIVESLSN 144 (242)
T ss_dssp ---HHHHHHHHHHHHHHHHGGGGHHHHHHHHHHHHHGGGCCCHHHHHHHHHHHHHHHTT-----SCHHHHHHHHHHHTTC
T ss_pred ---HHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHc-----CCHHHHHHHHHHHHcC
Confidence 13467777777665421 1444444444344556778888888888642 3456788888888999
Q ss_pred CChhHHHHHHHHHHHH
Q 000121 1176 PSRQIRDDALQMLETL 1191 (2150)
Q Consensus 1176 ~~~~IR~~A~~LL~~L 1191 (2150)
.+..+|..++..|..+
T Consensus 145 ~~~~vr~~~l~~l~~~ 160 (242)
T 2qk2_A 145 KNPSVKSETALFIARA 160 (242)
T ss_dssp SCHHHHHHHHHHHHHH
T ss_pred CChHHHHHHHHHHHHH
Confidence 9999999999999986
No 11
>2bpt_A Importin beta-1 subunit; nuclear transport, nucleocytoplasmic transport, nuclear trafficking, importin- beta, complex; 1.99A {Saccharomyces cerevisiae} SCOP: a.118.1.1 PDB: 2bku_B 3ea5_B* 3nd2_A
Probab=35.06 E-value=9.3e+02 Score=31.80 Aligned_cols=430 Identities=10% Similarity=0.057 Sum_probs=194.6
Q ss_pred HHHHHHHHhhccchhhhhhhhh-HHHHHHhhcccCCchhHHHHHHHHHHHHHHHHHccccccccccC----CCChhhHHH
Q 000121 1556 IALILLAEIAYENDEDFREHLP-LLFHVTFVSMDSSEDIVLEHCQHLLVNLLYSLAGRHLELYEVEN----SDGENKQQV 1630 (2150)
Q Consensus 1556 lalifL~dl~~~~~~d~~~~LP-~LlH~v~ll~Dh~~~~Vre~~~~LLvnLih~L~~~~~~l~~~~~----~~~~~~~~i 1630 (2150)
.++-.|.+++-.....+..|++ .++..++-.+++..+.||..|-+.+.+++...........+... .....++.+
T Consensus 243 ~a~~~l~~l~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~vr~~a~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (861)
T 2bpt_A 243 AAFGCLCKIMSKYYTFMKPYMEQALYALTIATMKSPNDKVASMTVEFWSTICEEEIDIAYELAQFPQSPLQSYNFALSSI 322 (861)
T ss_dssp HHHHHHHHHHHHHGGGCHHHHHHTHHHHHHHHTTCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCSCCCCCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHhhhhhhhhccCCchhhHHHHHHHH
Confidence 4455566665544455677888 88888777788888999999888777766544211000000000 000112222
Q ss_pred HHH----HHHHHhcCCCCCCCCCCcccccCCCCcHHHHHHHHHHHHHhhccCcchHHHHHHHHHHHHhhcCCccchhHHH
Q 000121 1631 VSL----IKYVQSKRGSMMWENEDPTVVRTELPSAALLSALVQSMVDAIFFQGDLRETWGAEALKWAMECTSRHLACRSH 1706 (2150)
Q Consensus 1631 ~~l----i~~l~~~~~~~~W~~ed~~~~~~~~~s~~~L~~~v~~i~~~~~~~~~l~~~W~~~AL~wAtsc~~RhlA~RSf 1706 (2150)
..+ ++.+...+ +|...+.+.+.. .....+..+.+.+ . .++-...-....+... -++...---+.
T Consensus 323 ~~il~~ll~~l~~~~-------~d~~d~~~~~r~--~a~~~L~~l~~~~-~-~~~~~~l~~~l~~~l~-~~~~~~r~~a~ 390 (861)
T 2bpt_A 323 KDVVPNLLNLLTRQN-------EDPEDDDWNVSM--SAGACLQLFAQNC-G-NHILEPVLEFVEQNIT-ADNWRNREAAV 390 (861)
T ss_dssp HHHHHHHHHHTTCCC-------CC-CCCCCHHHH--HHHHHHHHHHHHH-G-GGGHHHHHHHHHHHTT-CSSHHHHHHHH
T ss_pred HHHHHHHHHHHHhcc-------cccccccCcHHH--HHHHHHHHHHHHc-c-HhHHHHHHHHHHHHcC-CCChhHHHHHH
Confidence 333 33332211 111001111110 1111222222211 0 1111111111111111 11112222334
Q ss_pred HHHhhcCCCCCh----HHHHHHHHHHHHhhcCCCCChhhHHHHHHHHHHHHHhccCCC--cccchhhHHHHHHhhccCCc
Q 000121 1707 QIYRALRPSVTS----DTCVLLLRCLHRCLGNPIPPVLGFIMEILMTLQVMVENMEPE--KVILYPQLFWGCVAMMHTDF 1780 (2150)
Q Consensus 1707 QVfr~L~~~vd~----~~l~~lL~rL~~tis~~~~d~q~f~~eIL~TL~~iv~~l~~~--~~~~~pQLFW~avA~L~s~~ 1780 (2150)
..++.|....+. ..+.+++..|.+.+.|+++.++.-+.. +|..+...+.++ ..-++++++=..+.+|+..
T Consensus 391 ~~l~~i~~~~~~~~~~~~l~~il~~l~~~l~d~~~~vr~~a~~---~l~~l~~~~~~~~~~~~~~~~~l~~l~~~l~~~- 466 (861)
T 2bpt_A 391 MAFGSIMDGPDKVQRTYYVHQALPSILNLMNDQSLQVKETTAW---CIGRIADSVAESIDPQQHLPGVVQACLIGLQDH- 466 (861)
T ss_dssp HHHHHTSSSSCHHHHHHHHHHHHHHHHHGGGCSCHHHHHHHHH---HHHHHHHHHGGGSCTTTTHHHHHHHHHHHHTSC-
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHH---HHHHHHHHhhhhcCCHHHHHHHHHHHHHHhccC-
Confidence 556667655542 345667778888888877666654444 555555544321 1124677766666677654
Q ss_pred HHHHHHHHHHHHHHhhhcCCCChhhHHHHhhCCCCCCcccCCCCCcccccccCCCCCCCCCCCCCCCcchHHHHhhccCC
Q 000121 1781 VHVYCQVLELFSRVIDRLSFRDRTTENVLLSSMPRDELDTDGDTGDFQRTESRGYELPPTSGTLPKFEGVQPLVLKGLMS 1860 (2150)
Q Consensus 1781 e~eF~~al~LL~~~L~~ld~~d~~~~~~Ll~~~P~~~~~~~~~~~~l~~l~~~G~~~~~~~~~~~~F~glq~lllKGlrs 1860 (2150)
...-..|...|..+.+.++ + .+... ..+.++.+.+.+++.+.+
T Consensus 467 ~~v~~~a~~al~~l~~~~~--~----------~~~~~-------------------------l~~~~~~il~~L~~~l~~ 509 (861)
T 2bpt_A 467 PKVATNCSWTIINLVEQLA--E----------ATPSP-------------------------IYNFYPALVDGLIGAANR 509 (861)
T ss_dssp HHHHHHHHHHHHHHHHHHS--S----------SSSCG-------------------------GGGGHHHHHHHHHHHHTC
T ss_pred hHHHHHHHHHHHHHHHhcc--c----------ccchh-------------------------hHHHHHHHHHHHHHHHhC
Confidence 4444555666666555442 0 00000 012245677777888875
Q ss_pred CC----ChhHHHHHHHHhhccCCCccccCCchhHHHHHHHHhhHHHHhhccCCCC---CCCCch-hHHHHHHHHHHHHHH
Q 000121 1861 TV----SHGVSIEVLSQITVHSCDSIFGDAETRLLMHITGLLPWLCLQLGKDAVV---GPASPL-QQQYQKACSVASNIA 1932 (2150)
Q Consensus 1861 s~----t~~~tl~~L~~L~~~~~~~lig~~~~rll~~~la~LP~~l~~~~~~~~~---~~~~~~-~~~~~~~~~~A~~la 1932 (2150)
.. ....+++.|..+....... ..-.+-.++|.++..+.+.-.- ....+. ......-..+...|.
T Consensus 510 ~d~~~~vr~~a~~al~~l~~~~~~~--------~~~~~~~l~~~l~~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~ 581 (861)
T 2bpt_A 510 IDNEFNARASAFSALTTMVEYATDT--------VAETSASISTFVMDKLGQTMSVDENQLTLEDAQSLQELQSNILTVLA 581 (861)
T ss_dssp SCCGGGHHHHHHHHHHHHHHHCCGG--------GHHHHHHHHHHHHHHHHHHTTSCGGGCCHHHHHHHHHHHHHHHHHHH
T ss_pred cCcchHHHHHHHHHHHHHHHHcchh--------hHHHHHHHHHHHHHHHHHHHhhhcccCChhhHHHHHHHHHHHHHHHH
Confidence 43 3456778888776542211 1222335566655554321000 000000 000111123445566
Q ss_pred HHHHhCCC---ChHHHHHHH----Hhcccc-cchhh---HHHhHHHhhhhhcccccchHHHHHHHHHHhcCChHHHHHHH
Q 000121 1933 LWCRAKSL---DELGTVFVA----YSRGEI-KSIDN---LLACVSPLLWNEWFPKHSALAFGHLLRLLEKGPVEYQRVIL 2001 (2150)
Q Consensus 1933 ~~~~~~~~---~~La~vl~~----~a~~~f-~~~~d---fl~~~~~~l~~~~fp~~~~~~l~~L~~lL~~~~~~~~~~~l 2001 (2150)
.++...|. +-+..+|.. +....- .-.++ ++..++..+...|.| |-..++..|+..|.......+...+
T Consensus 582 ~l~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~v~~~~~~~l~~l~~~~~~~~~~-~l~~i~~~l~~~l~~~~~~vr~~a~ 660 (861)
T 2bpt_A 582 AVIRKSPSSVEPVADMLMGLFFRLLEKKDSAFIEDDVFYAISALAASLGKGFEK-YLETFSPYLLKALNQVDSPVSITAV 660 (861)
T ss_dssp HHHHHCGGGTGGGHHHHHHHHHHHHHSTTGGGTHHHHHHHHHHHHHHHGGGGHH-HHHHHHHHHHHHHHCTTSHHHHHHH
T ss_pred HHHHHhhhhhHHHHHHHHHHHHHHHccCCCCcHHHHHHHHHHHHHHHHhhhHHH-HHHHHHHHHHHHhccccHHHHHHHH
Confidence 67765442 333444433 322211 11222 334444444333333 4445677788888644455666666
Q ss_pred HHHHHhhcCCCCC-CCCchhhHHHHHHHhcCc-----CHHHHHHHHHHHHhc
Q 000121 2002 LMLKALLQHTPMD-ASQSPHMYAIVSQLVEST-----LCWEALSVLEALLQS 2047 (2150)
Q Consensus 2002 ~iL~~ll~~~~~~-~~~~~~l~~~l~rll~t~-----~~~eAL~VL~~v~~~ 2047 (2150)
.++..+...++-. ....++++..+.+.++.+ .-..|+..+..++..
T Consensus 661 ~~l~~l~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~vr~~~~~~l~~l~~~ 712 (861)
T 2bpt_A 661 GFIADISNSLEEDFRRYSDAMMNVLAQMISNPNARRELKPAVLSVFGDIASN 712 (861)
T ss_dssp HHHHHHHHHTGGGGHHHHHHHHHHHHHHHHCTTCCTTHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhchhccchHHHHHHHHHHHhCCccccHhhhHHHHHHHHHHHHH
Confidence 7766666554311 011234555555665532 344455555555443
No 12
>1u6g_C TIP120 protein, CAND1; cullin repeat, heat repeat, ring finger, ligase; 3.10A {Homo sapiens} SCOP: a.118.1.2 PDB: 4a0c_A
Probab=33.73 E-value=5.8e+02 Score=35.87 Aligned_cols=243 Identities=11% Similarity=0.127 Sum_probs=0.0
Q ss_pred HhhcCCccchhHHHHHHhhcCCCCChHHHHHHHHHHHHhhcCCCCChhhHHHHHHHHHHHHHhccCCC------cccchh
Q 000121 1693 AMECTSRHLACRSHQIYRALRPSVTSDTCVLLLRCLHRCLGNPIPPVLGFIMEILMTLQVMVENMEPE------KVILYP 1766 (2150)
Q Consensus 1693 Atsc~~RhlA~RSfQVfr~L~~~vd~~~l~~lL~rL~~tis~~~~d~q~f~~eIL~TL~~iv~~l~~~------~~~~~p 1766 (2150)
+..-++..+.--+...++.|...+....+..++..|.+.+.++++.++.-+.. +|..++..+.++ ...+.+
T Consensus 56 ~L~d~~~~vR~~A~~~L~~l~~~~~~~~~~~i~~~Ll~~l~d~~~~vR~~a~~---~L~~i~~~l~~~~~~~~~~~~~~~ 132 (1230)
T 1u6g_C 56 LLEDKNGEVQNLAVKCLGPLVSKVKEYQVETIVDTLCTNMLSDKEQLRDISSI---GLKTVIGELPPASSGSALAANVCK 132 (1230)
T ss_dssp HTTCSSHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHTTCSSSHHHHHHHH---HHHHHHHHCC-----CCTHHHHHH
T ss_pred HhcCCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHhcCCcHHHHHHHHH---HHHHHHHhCCCcccccchHHHHHH
Q ss_pred hHHHHHHhhcc-CCcHHHHHHHHHHHHHHhhhcCCCChhhHHHHhhCCCCCCcccCCCCCcccccccCCCCCCCCCCCCC
Q 000121 1767 QLFWGCVAMMH-TDFVHVYCQVLELFSRVIDRLSFRDRTTENVLLSSMPRDELDTDGDTGDFQRTESRGYELPPTSGTLP 1845 (2150)
Q Consensus 1767 QLFW~avA~L~-s~~e~eF~~al~LL~~~L~~ld~~d~~~~~~Ll~~~P~~~~~~~~~~~~l~~l~~~G~~~~~~~~~~~ 1845 (2150)
+++=....+++ +..+..=..|+..|..++... +....+
T Consensus 133 ~llp~L~~~l~~~~~~~~~~~al~~l~~~~~~~-----------------------------------------~~~l~~ 171 (1230)
T 1u6g_C 133 KITGRLTSAIAKQEDVSVQLEALDIMADMLSRQ-----------------------------------------GGLLVN 171 (1230)
T ss_dssp HHHHHHHHHHSCCSCHHHHHHHHHHHHHHHHHT-----------------------------------------CSSCTT
T ss_pred HHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHh-----------------------------------------HhHHHH
Q ss_pred CCcchHHHHhhccCCCCC--hhHHHHHHHHhhccCCCccccCCchhHHHHHHHHhhHHHHhhccCCCCCCCCchhHHHHH
Q 000121 1846 KFEGVQPLVLKGLMSTVS--HGVSIEVLSQITVHSCDSIFGDAETRLLMHITGLLPWLCLQLGKDAVVGPASPLQQQYQK 1923 (2150)
Q Consensus 1846 ~F~glq~lllKGlrss~t--~~~tl~~L~~L~~~~~~~lig~~~~rll~~~la~LP~~l~~~~~~~~~~~~~~~~~~~~~ 1923 (2150)
.++.+.+.++++|.++.. ...+++.|..+.....+..+.. .+|.++..+.++.......
T Consensus 172 ~~~~ll~~l~~~L~~~~~~vR~~a~~al~~l~~~~~~~~~~~-----------~l~~l~~~L~~~~~~~~r~-------- 232 (1230)
T 1u6g_C 172 FHPSILTCLLPQLTSPRLAVRKRTIIALGHLVMSCGNIVFVD-----------LIEHLLSELSKNDSMSTTR-------- 232 (1230)
T ss_dssp THHHHHHHHGGGGGCSSHHHHHHHHHHHHHHTTTC----CTT-----------HHHHHHHHHHHTCSSCSCT--------
T ss_pred HHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHhcCHHHHHH-----------HHHHHHHHhccCCchhHHH--------
Q ss_pred HHHHHHHHHHHHHhCCCChHHHHHHHHhcccccchhhHHHhHHHhhhhhcccccchHHHHHHHHHHhcCChHHHHHHHHH
Q 000121 1924 ACSVASNIALWCRAKSLDELGTVFVAYSRGEIKSIDNLLACVSPLLWNEWFPKHSALAFGHLLRLLEKGPVEYQRVILLM 2003 (2150)
Q Consensus 1924 ~~~~A~~la~~~~~~~~~~La~vl~~~a~~~f~~~~dfl~~~~~~l~~~~fp~~~~~~l~~L~~lL~~~~~~~~~~~l~i 2003 (2150)
.+++.+..++... ...|..|-..++-+++..+.......+...++.
T Consensus 233 --~a~~~l~~l~~~~--------------------------------~~~~~~~l~~l~~~ll~~l~d~~~~vR~~a~~~ 278 (1230)
T 1u6g_C 233 --TYIQCIAAISRQA--------------------------------GHRIGEYLEKIIPLVVKFCNVDDDELREYCIQA 278 (1230)
T ss_dssp --THHHHHHHHHHHS--------------------------------SGGGTTSCTTHHHHHHHHHSSCCTTTHHHHHHH
T ss_pred --HHHHHHHHHHHHh--------------------------------HHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHH
Q ss_pred HHHhhcCCCCC-CCCchhhHHHHHHHhcCc
Q 000121 2004 LKALLQHTPMD-ASQSPHMYAIVSQLVEST 2032 (2150)
Q Consensus 2004 L~~ll~~~~~~-~~~~~~l~~~l~rll~t~ 2032 (2150)
+..+....+-. ....++++.++++.+..+
T Consensus 279 l~~l~~~~~~~~~~~l~~li~~ll~~l~~d 308 (1230)
T 1u6g_C 279 FESFVRRCPKEVYPHVSTIINICLKYLTYD 308 (1230)
T ss_dssp HHHHHHCTTCCCHHHHHHHHHHHTTCCCCC
T ss_pred HHHHHHHChHHHHHhHHHHHHHHHHHhCCC
No 13
>2bpt_A Importin beta-1 subunit; nuclear transport, nucleocytoplasmic transport, nuclear trafficking, importin- beta, complex; 1.99A {Saccharomyces cerevisiae} SCOP: a.118.1.1 PDB: 2bku_B 3ea5_B* 3nd2_A
Probab=31.70 E-value=1e+03 Score=31.34 Aligned_cols=398 Identities=11% Similarity=0.024 Sum_probs=183.5
Q ss_pred HHHHHHHHHhhccch-hhhhhhhhHHHHHHhhcccCCchhHHHHHHHHHHHHHHHHHccccccccccCCCChh-hHHHHH
Q 000121 1555 DIALILLAEIAYEND-EDFREHLPLLFHVTFVSMDSSEDIVLEHCQHLLVNLLYSLAGRHLELYEVENSDGEN-KQQVVS 1632 (2150)
Q Consensus 1555 qlalifL~dl~~~~~-~d~~~~LP~LlH~v~ll~Dh~~~~Vre~~~~LLvnLih~L~~~~~~l~~~~~~~~~~-~~~i~~ 1632 (2150)
+-|+..+..++-... .....|+|.++..++-.+.+..+.||..+-..|-++...+...... ... .+-+..
T Consensus 387 ~~a~~~l~~i~~~~~~~~~~~~l~~il~~l~~~l~d~~~~vr~~a~~~l~~l~~~~~~~~~~--------~~~~~~~l~~ 458 (861)
T 2bpt_A 387 EAAVMAFGSIMDGPDKVQRTYYVHQALPSILNLMNDQSLQVKETTAWCIGRIADSVAESIDP--------QQHLPGVVQA 458 (861)
T ss_dssp HHHHHHHHHTSSSSCHHHHHHHHHHHHHHHHHGGGCSCHHHHHHHHHHHHHHHHHHGGGSCT--------TTTHHHHHHH
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHhhhhcCC--------HHHHHHHHHH
Confidence 345666776663332 5677889988888877777789999998876666665544321000 011 122233
Q ss_pred HHHHHHhcCCCCCCCCCCcccccCCCCcHHHHHHHHHHHHH--hhccCcchHHHHHHHHHHHHhhcCC--ccchhHHHHH
Q 000121 1633 LIKYVQSKRGSMMWENEDPTVVRTELPSAALLSALVQSMVD--AIFFQGDLRETWGAEALKWAMECTS--RHLACRSHQI 1708 (2150)
Q Consensus 1633 li~~l~~~~~~~~W~~ed~~~~~~~~~s~~~L~~~v~~i~~--~~~~~~~l~~~W~~~AL~wAtsc~~--RhlA~RSfQV 1708 (2150)
+++.+. ++. .. .......+..++...-+ .-...|-+.+-+... --.+..+. .++....+..
T Consensus 459 l~~~l~----------~~~--~v-~~~a~~al~~l~~~~~~~~~~~l~~~~~~il~~L--~~~l~~~d~~~~vr~~a~~a 523 (861)
T 2bpt_A 459 CLIGLQ----------DHP--KV-ATNCSWTIINLVEQLAEATPSPIYNFYPALVDGL--IGAANRIDNEFNARASAFSA 523 (861)
T ss_dssp HHHHHT----------SCH--HH-HHHHHHHHHHHHHHHSSSSSCGGGGGHHHHHHHH--HHHHTCSCCGGGHHHHHHHH
T ss_pred HHHHhc----------cCh--HH-HHHHHHHHHHHHHhcccccchhhHHHHHHHHHHH--HHHHhCcCcchHHHHHHHHH
Confidence 343331 110 00 00111222222222110 000012333333322 12222222 2233333444
Q ss_pred HhhcCCCCC---h----HHHHHHHHHHHHhhcCC-------C-CChhhHHHHHHHHHHHHHhccCCCcccchhhHHHHHH
Q 000121 1709 YRALRPSVT---S----DTCVLLLRCLHRCLGNP-------I-PPVLGFIMEILMTLQVMVENMEPEKVILYPQLFWGCV 1773 (2150)
Q Consensus 1709 fr~L~~~vd---~----~~l~~lL~rL~~tis~~-------~-~d~q~f~~eIL~TL~~iv~~l~~~~~~~~pQLFW~av 1773 (2150)
++.|..... . ..+..++..|.+++.-. + ++....-..++.+|..++..+..+-..+.++++=...
T Consensus 524 l~~l~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~l~~~l~ 603 (861)
T 2bpt_A 524 LTTMVEYATDTVAETSASISTFVMDKLGQTMSVDENQLTLEDAQSLQELQSNILTVLAAVIRKSPSSVEPVADMLMGLFF 603 (861)
T ss_dssp HHHHHHHCCGGGHHHHHHHHHHHHHHHHHHTTSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHCGGGTGGGHHHHHHHHH
T ss_pred HHHHHHHcchhhHHHHHHHHHHHHHHHHHHHhhhcccCChhhHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHH
Confidence 444442222 1 23333455555542110 0 0111223356667777777766543345677777777
Q ss_pred hhccCCcH-HHHHHHHHHHHHHhhhcCCCChhhHHHHhhCCCCCCcccCCCCCcccccccCCCCCCCCCCCCCCCcchHH
Q 000121 1774 AMMHTDFV-HVYCQVLELFSRVIDRLSFRDRTTENVLLSSMPRDELDTDGDTGDFQRTESRGYELPPTSGTLPKFEGVQP 1852 (2150)
Q Consensus 1774 A~L~s~~e-~eF~~al~LL~~~L~~ld~~d~~~~~~Ll~~~P~~~~~~~~~~~~l~~l~~~G~~~~~~~~~~~~F~glq~ 1852 (2150)
.+|+.... ..-..++..+..+....+ .+ +.+-++.+.+
T Consensus 604 ~~l~~~~~~~v~~~~~~~l~~l~~~~~---------------~~--------------------------~~~~l~~i~~ 642 (861)
T 2bpt_A 604 RLLEKKDSAFIEDDVFYAISALAASLG---------------KG--------------------------FEKYLETFSP 642 (861)
T ss_dssp HHHHSTTGGGTHHHHHHHHHHHHHHHG---------------GG--------------------------GHHHHHHHHH
T ss_pred HHHccCCCCcHHHHHHHHHHHHHHHHh---------------hh--------------------------HHHHHHHHHH
Confidence 77776544 444555666655544331 00 0111346777
Q ss_pred HHhhccCCCC--ChhHHHHHHHHhhccCCCccccCCchhHHHHHHHHhhHHHHhhccCCCCCCCCchhHHHHHHHHHHHH
Q 000121 1853 LVLKGLMSTV--SHGVSIEVLSQITVHSCDSIFGDAETRLLMHITGLLPWLCLQLGKDAVVGPASPLQQQYQKACSVASN 1930 (2150)
Q Consensus 1853 lllKGlrss~--t~~~tl~~L~~L~~~~~~~lig~~~~rll~~~la~LP~~l~~~~~~~~~~~~~~~~~~~~~~~~~A~~ 1930 (2150)
.+++++.+.. ....++.++..+... +|. .+.-.+-.++|.++..+.+... +... .+.+..+-..
T Consensus 643 ~l~~~l~~~~~~vr~~a~~~l~~l~~~-----~~~---~~~~~~~~l~~~l~~~l~~~~~---~~~v---r~~~~~~l~~ 708 (861)
T 2bpt_A 643 YLLKALNQVDSPVSITAVGFIADISNS-----LEE---DFRRYSDAMMNVLAQMISNPNA---RREL---KPAVLSVFGD 708 (861)
T ss_dssp HHHHHHHCTTSHHHHHHHHHHHHHHHH-----TGG---GGHHHHHHHHHHHHHHHHCTTC---CTTH---HHHHHHHHHH
T ss_pred HHHHHhccccHHHHHHHHHHHHHHHHH-----hch---hccchHHHHHHHHHHHhCCccc---cHhh---hHHHHHHHHH
Confidence 8888886443 345667777776542 222 2333345667776666543211 1111 1223333223
Q ss_pred HHHHHHhCCCChHHHHHHHHh---ccccc-chh--------------hHHHhHHHhhhh--hcccccchHHHHHHHHHHh
Q 000121 1931 IALWCRAKSLDELGTVFVAYS---RGEIK-SID--------------NLLACVSPLLWN--EWFPKHSALAFGHLLRLLE 1990 (2150)
Q Consensus 1931 la~~~~~~~~~~La~vl~~~a---~~~f~-~~~--------------dfl~~~~~~l~~--~~fp~~~~~~l~~L~~lL~ 1990 (2150)
|+..+...=.+-+..++..+. ..... ..+ +.+..++..+.. ..|-.|-..++.+|...+.
T Consensus 709 l~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~d~d~~~~~~~vr~~~l~~~~~i~~~l~~~~~~~~~~~~~i~~~l~~~~~ 788 (861)
T 2bpt_A 709 IASNIGADFIPYLNDIMALCVAAQNTKPENGTLEALDYQIKVLEAVLDAYVGIVAGLHDKPEALFPYVGTIFQFIAQVAE 788 (861)
T ss_dssp HHHHHGGGGHHHHHHHHHHHHHHHTCCCSSSSHHHHHHHHHHHHHHHHHHHHHHHHTTTCHHHHGGGHHHHHHHHHHHHH
T ss_pred HHHHhhhhHHHHHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHc
Confidence 333332221222444444332 11110 011 223333333321 1233355567777777775
Q ss_pred cC----ChHHHHHHHHHHHHhhcCC-CCC-CCCch-hhHHHHHHHhc
Q 000121 1991 KG----PVEYQRVILLMLKALLQHT-PMD-ASQSP-HMYAIVSQLVE 2030 (2150)
Q Consensus 1991 ~~----~~~~~~~~l~iL~~ll~~~-~~~-~~~~~-~l~~~l~rll~ 2030 (2150)
.. ....++..+..|..|.... .-. ....+ +++..+++.+.
T Consensus 789 d~~~~~~~~vr~~a~~~l~~l~~~~~g~~~~~~~~~~~~~~ll~~l~ 835 (861)
T 2bpt_A 789 DPQLYSEDATSRAAVGLIGDIAAMFPDGSIKQFYGQDWVIDYIKRTR 835 (861)
T ss_dssp CHHHHTSHHHHHHHHHHHHHHHHHCTTSTTGGGTTCHHHHHHHHHHH
T ss_pred CcccCCcHHHHHHHHHHHHHHHHHcCCchHHHHHhcHHHHHHHHHHh
Confidence 42 4566777788888887755 221 22334 67777777666
No 14
>2jdq_A Importin alpha-1 subunit; transport, PB2 subunit, nuclear protein, protein transport, armadillo repeats; 2.2A {Homo sapiens} PDB: 3tj3_A
Probab=28.56 E-value=3.7e+02 Score=32.55 Aligned_cols=263 Identities=11% Similarity=0.051 Sum_probs=0.0
Q ss_pred HHHHHcccccCCChhHHHHHHHHhCCC---CHHHHHHHHH--HHHHHHHhhccccccCcccccccchhhHHHHHHHHHHH
Q 000121 816 LYHFIFPSLKSGSEAHIHAATMALGHS---HLEACEIMFS--ELTSFIDEVSSETEFKPKWKMQSQKLRREELRVHIANI 890 (2150)
Q Consensus 816 LFk~vvPlL~se~~~iRdAvV~aLG~i---n~~~y~~Lle--eL~~~i~e~~~~~~~~~~~~~~~rr~rrd~LR~~v~~I 890 (2150)
+...++.+|+++++.+|+.++.+||.+ ++..-..+++ .+..+++-. .....+. +|...+..
T Consensus 108 ~i~~L~~lL~~~~~~vr~~a~~~L~~l~~~~~~~~~~~~~~~~i~~L~~~l----~~~~~~~----------v~~~a~~~ 173 (450)
T 2jdq_A 108 AVPIFIELLSSEFEDVQEQAVWALGNIAGDSTMCRDYVLDCNILPPLLQLF----SKQNRLT----------MTRNAVWA 173 (450)
T ss_dssp HHHHHHHHTTCSCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTCHHHHHHHT----TSCCCHH----------HHHHHHHH
T ss_pred CHHHHHHHHcCCCHHHHHHHHHHHHHHccCCHHHHHHHHHCCCHHHHHHHh----cCCCCHH----------HHHHHHHH
Q ss_pred HHHHhhhc-CCCCcCCchhhHHHHHHHHHHHhHhhcCcccccccchHHHHHHHHHHHHhhchhcccccCccCCHHHHHHH
Q 000121 891 YRTVAENI-WPGLLSRKPVFRLHYLKFIDDTTRHILTASAESFHETQPLRYALASVLRSLAPEFVDSKSEKFDIRTRKKL 969 (2150)
Q Consensus 891 ~~l~a~~~-~~~~L~~~~~l~~~~l~FI~~~~~~l~~~~~~~~~e~q~LR~~fc~li~~l~~~~~~~~~~~fp~e~R~sl 969 (2150)
+..++... ..........+.+.+++.+. .+-..+|...|..+.++. .........-....+
T Consensus 174 L~~l~~~~~~~~~~~~~~~~l~~L~~~l~--------------~~~~~v~~~a~~~L~~l~----~~~~~~~~~~~~~~~ 235 (450)
T 2jdq_A 174 LSNLCRGKSPPPEFAKVSPCLNVLSWLLF--------------VSDTDVLADACWALSYLS----DGPNDKIQAVIDAGV 235 (450)
T ss_dssp HHHHHCCSSSCCCGGGTGGGHHHHHHHTT--------------CCCHHHHHHHHHHHHHHT----SSSHHHHHHHHHTTT
T ss_pred HHHHhCCCCCCCCHHHHHHHHHHHHHHHc--------------cCCHHHHHHHHHHHHHHH----CCCcHHHHHHHHcCc
Q ss_pred HHHHhhhcCCCCCCCCCCCCchhhhHHHHHhhhhhccccCcchhhhhhhhhHHHHHHHHHHHHHHHHHhhcCCCcCCccc
Q 000121 970 FDLLLSWSDDTGSTWGQDGVNDYRREVERYKASQHTRSKDSVDKISFDKELSEQVEAIQWASMNAMASLLYGPCFDDNAR 1049 (2150)
Q Consensus 970 F~l~~eWcg~~~~~~g~~~~s~~~~~~~r~~~~~~~~~k~~~~~~~~~~~~~~~~~~L~~aAl~AMAaLc~Gp~fd~~~~ 1049 (2150)
+..+.+--..... .++..|+.|+..|+.|.--.....
T Consensus 236 i~~L~~ll~~~~~-------------------------------------------~v~~~a~~~L~~l~~~~~~~~~~~ 272 (450)
T 2jdq_A 236 CRRLVELLMHNDY-------------------------------------------KVVSPALRAVGNIVTGDDIQTQVI 272 (450)
T ss_dssp HHHHHHHTTCSCH-------------------------------------------HHHHHHHHHHHHHTTSCHHHHHHH
T ss_pred HHHHHHHHCCCch-------------------------------------------hHHHHHHHHHHHHhhCChHHHHHH
Q ss_pred ccchhHHHHHHHhhcCCCCCCCCCCCCCCCCCCCcCCccCCCCCCCcccccccCCchhhHHHHHHHHHHHHhccc-----
Q 000121 1050 KMSGRVISWINSLFIEPAPRAPFGYSPADPRTPSYSKHAGEGGRGAASRDRHRGGHHRVALAKLALKNLLLTNLD----- 1124 (2150)
Q Consensus 1050 ~~~g~ll~WId~lf~s~~~~~~~~~sp~~~~~~s~~k~~~e~~~~~~~~~~~~~~~~~~~lgr~AL~nLL~~N~~----- 1124 (2150)
...| ++..+-.++.+++..+ +.-+..+|.|+...+++
T Consensus 273 ~~~~-~l~~L~~ll~~~~~~v-------------------------------------r~~a~~~L~~l~~~~~~~~~~~ 314 (450)
T 2jdq_A 273 LNCS-ALQSLLHLLSSPKESI-------------------------------------KKEACWTISNITAGNRAQIQTV 314 (450)
T ss_dssp HTTT-HHHHHHHHTTCSSHHH-------------------------------------HHHHHHHHHHHTTSCHHHHHHH
T ss_pred HHCc-cHHHHHHHHcCCCHHH-------------------------------------HHHHHHHHHHHHcCCHHHHHHH
Q ss_pred ----hHHHHHHhhhcCCccchhhHHHHHHHHHhhcCCCCCc---HHHHHHHHHHhccCCChhHHHHHHHHHHHH
Q 000121 1125 ----LFPACIDQCYYSDAAIADGYFSVLAEVYMRQEIPKCE---IQRLLSLILYKVVDPSRQIRDDALQMLETL 1191 (2150)
Q Consensus 1125 ----Ll~~~I~rCY~~~~~va~~yF~vl~ev~~~~~~~~~d---~~~LL~L~L~~lgs~~~~IR~~A~~LL~~L 1191 (2150)
++...++..-..++.+...-..+|+++.......... -..++...+-.+.+++..+|..|...|..+
T Consensus 315 ~~~~~l~~L~~~l~~~~~~v~~~a~~~L~~l~~~~~~~~~~~l~~~~~i~~L~~ll~~~~~~v~~~a~~aL~~l 388 (450)
T 2jdq_A 315 IDANIFPALISILQTAEFRTRKEAAWAITNATSGGSAEQIKYLVELGCIKPLCDLLTVMDSKIVQVALNGLENI 388 (450)
T ss_dssp HHTTHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHTCHHHHHHGGGSSCHHHHHHHHHHHHHH
T ss_pred HHCCCHHHHHHHHhcCCHHHHHHHHHHHHHHHcCCCHHHHHHHHHCCCHHHHHHHhcCCCHHHHHHHHHHHHHH
No 15
>1b3u_A Protein (protein phosphatase PP2A); scaffold protein, phosphorylation, heat repeat; 2.30A {Homo sapiens} SCOP: a.118.1.2 PDB: 2ie4_A* 2ie3_A* 2npp_A* 3k7v_A* 3k7w_A* 3fga_A* 2pf4_A 2iae_A 2nym_A* 2nyl_A* 3dw8_A* 2pkg_A 3c5w_A
Probab=24.96 E-value=2.6e+02 Score=35.28 Aligned_cols=88 Identities=13% Similarity=0.094 Sum_probs=50.2
Q ss_pred HHHHhhcCCCCChHHHHHHHHHHHHhhcCCCCChhhHHHHHHHHHHHHHhccCCCcccchhhHHHHHHhhccCCcHHHHH
Q 000121 1706 HQIYRALRPSVTSDTCVLLLRCLHRCLGNPIPPVLGFIMEILMTLQVMVENMEPEKVILYPQLFWGCVAMMHTDFVHVYC 1785 (2150)
Q Consensus 1706 fQVfr~L~~~vd~~~l~~lL~rL~~tis~~~~d~q~f~~eIL~TL~~iv~~l~~~~~~~~pQLFW~avA~L~s~~e~eF~ 1785 (2150)
.++++.+.+.+.+....+++..|.+.+.|++++++..+.+.| ..+...+.++. ..+.++=....+++...+..=.
T Consensus 147 ~~~l~~~~~~~~~~~~~~l~~~l~~l~~d~~~~VR~~a~~~l---~~l~~~~~~~~--~~~~l~~~l~~~~~d~~~~vr~ 221 (588)
T 1b3u_A 147 CGLFSVCYPRVSSAVKAELRQYFRNLCSDDTPMVRRAAASKL---GEFAKVLELDN--VKSEIIPMFSNLASDEQDSVRL 221 (588)
T ss_dssp GGGHHHHTTTSCHHHHHHHHHHHHHHHTCSCHHHHHHHHHHH---HHHHHTSCHHH--HHHTHHHHHHHHHTCSCHHHHT
T ss_pred HHHHHHHHHhcCHHHHHHHHHHHHHHhCCCCHHHHHHHHHHH---HHHHHHhcHHh--HHHHHHHHHHHHhcCCcHHHHH
Confidence 345666677777777778888888888888777777666654 45555443321 1233332233445544444444
Q ss_pred HHHHHHHHHhhhc
Q 000121 1786 QVLELFSRVIDRL 1798 (2150)
Q Consensus 1786 ~al~LL~~~L~~l 1798 (2150)
.|+..|..+...+
T Consensus 222 ~a~~~l~~l~~~~ 234 (588)
T 1b3u_A 222 LAVEACVNIAQLL 234 (588)
T ss_dssp THHHHHHHHHHHS
T ss_pred HHHHHHHHHHHhC
Confidence 5555555544433
No 16
>3u0r_A Apoptosis inhibitor 5; heat repeat, armadillo repeat, lysine acetylation; 2.50A {Homo sapiens} PDB: 3v6a_A
Probab=21.43 E-value=4.2e+02 Score=33.70 Aligned_cols=117 Identities=20% Similarity=0.168 Sum_probs=74.0
Q ss_pred HHHHHHHHHHHHHHHHh-CCCChHHHHHHHHhcccccchhhHHHhHHHhhhhhcccccchHHHHHHHHHHhcCChHHHHH
Q 000121 1921 YQKACSVASNIALWCRA-KSLDELGTVFVAYSRGEIKSIDNLLACVSPLLWNEWFPKHSALAFGHLLRLLEKGPVEYQRV 1999 (2150)
Q Consensus 1921 ~~~~~~~A~~la~~~~~-~~~~~La~vl~~~a~~~f~~~~dfl~~~~~~l~~~~fp~~~~~~l~~L~~lL~~~~~~~~~~ 1999 (2150)
++...+..+.|+..-+. .+...--+.+-.-+||. ...+....|.++-.- .+||++..+++.-++-|.|-.-..++..
T Consensus 7 ie~LY~~~~~L~da~dk~~~~~~~y~~Il~~~kg~-~k~K~LaaQ~I~kff-k~FP~l~~~Ai~a~lDLcEDed~~IR~q 84 (507)
T 3u0r_A 7 VEELYRNYGILADATEQVGQHKDAYQVILDGVKGG-TKEKRLAAQFIPKFF-KHFPELADSAINAQLDLCEDEDVSIRRQ 84 (507)
T ss_dssp HHHHHHHHHHHHHTGGGGGGGHHHHHHHHHGGGSC-HHHHHHHHHHHHHHG-GGCGGGHHHHHHHHHHHHTCSSHHHHHH
T ss_pred HHHHHHHhhHhhhccccccccHHHHHHHHHhcCCC-HHHHHHHHHHHHHHH-hhChhhHHHHHHHHHHHHhcccHHHHHH
Confidence 34444555545444433 22333334444456664 334677777544433 4699999999999999999877777665
Q ss_pred HHHHHHHhhcCCCCCCCCchhhHHHHHHHhcCcCHHHHHHHHHHH
Q 000121 2000 ILLMLKALLQHTPMDASQSPHMYAIVSQLVESTLCWEALSVLEAL 2044 (2150)
Q Consensus 2000 ~l~iL~~ll~~~~~~~~~~~~l~~~l~rll~t~~~~eAL~VL~~v 2044 (2150)
..+=|-.+-.. -+.+.+..+|.+||||+--.|..-|=...
T Consensus 85 aik~Lp~~ck~-----~~i~kiaDvL~QlLqtdd~~E~~~V~~sL 124 (507)
T 3u0r_A 85 AIKELPQFATG-----ENLPRVADILTQLLQTDDSAEFNLVNNAL 124 (507)
T ss_dssp HHHHGGGGCCT-----TCHHHHHHHHHHHTTCCCHHHHHHHHHHH
T ss_pred HHHhhHHHhhh-----hhhhhHHHHHHHHHhccchHHHHHHHHHH
Confidence 44444444332 44777888999999999887766554443
Done!