Your job contains 1 sequence.
>000124
MQMSKSPSPEPQAHGFSSTSQPRESNGTSAMDDPESTMSTVAKFLEQLHANMSSPQEREL
ITMRILTIAKAKKEARLLIGSHAQAMPLFISILRSGTPLAKVNVAATLSVLCKDEDLRLK
VLLGGCIPPLLSLLKSESTDTRKAAAEALYEVSSGGLSDDHVGMKIFVTEGVVPTLWDQL
NPKNKQDNVVQGFVTGALRNLCGDKDGYWRATLEAGGVDIIVGLLSSDNAAAQSNAASLL
ARLMLAFGDSIPTVIDSGAVKALVQLVGQNNDISVRASAADALEALSSKSIKAKKAVVAA
DGVPVLIGAIVAPSKECMQGQRGQALQGHATRALANIYGGMPALVVYLGELSQSPRLAAP
VADIIGALAYALMVFEQKSGVDDEPFDARQIEDILVMLLKPHDNKLVQERVLEAMASLYG
NIFLSQWVSHAEAKKVLIGLITMATADVREYLILSLTKLCRREVGIWEAIGKREGIQLLI
SLLGLSSEQHQEYAVQLIAILTEQVDDSKWAITAAGGIPPLVQLLEAGSQKAREVAAHVL
WILCCHSEDIRACVESAGAVPAFLWLLKSGGPKGQDASAMALTKLIRAADSATINQLLAL
LLGDSPSSKAHVIKVLGHVLTMALQEDLVQKGSAANKGLRSLVQVLNSSNEENQEYAASV
LADLFSMRQDICGSLATDEIVNPCMRLLTSNTQMVATQSARALGALSRPTKTKTTNKMSY
IAEGDVKPLIKLAKTSSIDAAETAVAALANLLSDPDIAAEVLLEDVVSALTRVLAEGTSE
GKKNASRALHQLLKHFPVGDVLKGNAQCRFVVLTLVDSLNAMDMNGTDVADALEVVALLA
RTKQGLNFTYPPWAALAEVPSSIEPLVCCLAEGPPPLQDKAIEILSRLCGDQPAVLGDFL
MARSSSIGALADRIMHSSSLEVRVGGAALLICAAKEHKKQSMDALDLSGYLKPLIYALVD
MMKQNSSCSSLDIEVRTPRGYMERTAFQEADDFDVPDPATILGGTVALWLLLIISSFLRN
NNVTVMEAGALEALSDKLASYTSNPQAEFEDTEGIWISALFLAILFQDANIVLSPATMRI
IPALALLLRSDEVIDRFFAAQAMASLVCSGSKGIILAIANSGAVAGLITLIGHIESDTPN
LVALSEEFFLVRYPDEVVLEKLFEIEDVRVGSTARKSIPLLVDILRPIPDRPGAPPVAVR
LLTQIVDGSDTNKLIMAEAGGLDALTKYLSLSPQDSTEATITELFRILFSNPDLIRYEAS
LSSLNQLIAVLHLGSRGARLSAARALHQLFDAENIKDSDLAGQAVPPLVDMLSAASECEL
EVALVALVKLTSGNTSKACLLTDIDGNLLESLYKILSSNSSLELKRNAAELCFIMFGNAK
IIANPIASECIQPLISLMQSDLSIVVESAVCAFERLLDDEQQVELVEGYDVVDLLVRLVS
GTNHRLVEATVCALIKLGKDRTPRKLQMVKAGIIDNCLDLLPVAPSALCSTIAELFRILT
NSSAIARSSDAAKIVEPLFMVLLQPDFSLWGQHSALQALVNILEKPQSLVTLKLTPSQVI
EPLLSFLESPSHAIQQLGTELLTHLLAQEHFQQDITTKNAVVPLVQLAGIGILNLQQTAV
KALEKISTSWPKAVADAGGIFEIAKVIIQDDPQPPHSLWESAALVLSNVLRFNTEYYFKV
PVVVLVKMLHSTLESTITVALNALLIHERTDASSAEQMTQAGVIDALLDLLRSHQCEETS
GRLLEALFNNGRIRQMKVSKYAIAPLSQYLLDPQTRSESGKLLAALALGDLSQHEGLARA
SASVSACRALISLLEDQSTDEMKMVAICALQNFVMCSRTNRRAVAEAGGILVVQELLLST
NAEVAGQAALLTKFLFSNHTLQEYVSNELIRSLTAALERELWSTATINEEVLRTLHVIFM
NFPKLHTSEAATLCIPHLVGALKSGSEAAQGSVLDTLCLLRNSWSTMPIDVAKSQAMIAA
EAIPILQMLMKTCPPSFHERADSLLHCLPGCLTVTIKRGNNLKQTMGTTNAFCRLTIGNG
PPRQTKVVSHSISPEWKEGFTWAFDVPPKGQKLHIICKSKNTFGKSTLGKVTIQIDKVVT
EGVYSGLFNLNHDNNKDSSSRTLEIEIIWSNRISDESI
The BLAST search returned 3 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 000124
(2138 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2204700 - symbol:AT1G77460 "AT1G77460" species... 6906 0. 1
TAIR|locus:2205866 - symbol:AT1G44120 species:3702 "Arabi... 5257 0. 1
TAIR|locus:2827868 - symbol:CSI1 "cellulose synthase-inte... 4531 0. 1
UNIPROTKB|Q5VRH9 - symbol:PUB12 "U-box domain-containing ... 140 1.1e-09 2
TAIR|locus:2017719 - symbol:AT1G23030 species:3702 "Arabi... 121 7.1e-09 2
TAIR|locus:2154124 - symbol:AT5G62560 species:3702 "Arabi... 126 7.4e-09 2
TAIR|locus:2082682 - symbol:PUB14 "plant U-box 14" specie... 142 2.1e-08 2
TAIR|locus:2158252 - symbol:AT5G67340 species:3702 "Arabi... 128 6.6e-08 2
TAIR|locus:2096687 - symbol:AT3G01400 species:3702 "Arabi... 158 1.0e-07 1
TAIR|locus:2102455 - symbol:AT3G54790 species:3702 "Arabi... 129 1.3e-07 2
TAIR|locus:2045334 - symbol:PUB4 "plant U-box 4" species:... 170 2.8e-07 2
TAIR|locus:2075140 - symbol:PUB13 "plant U-box 13" specie... 152 8.2e-07 2
SGD|S000000739 - symbol:VAC8 "Phosphorylated and palmitoy... 152 1.2e-06 1
TAIR|locus:2099634 - symbol:AT3G03440 "AT3G03440" species... 144 1.2e-06 2
UNIPROTKB|Q0IMG9 - symbol:SPL11 "E3 ubiquitin-protein lig... 123 1.4e-06 2
TAIR|locus:2201205 - symbol:AT1G23180 "AT1G23180" species... 111 5.6e-06 3
TAIR|locus:2178818 - symbol:AT5G58680 "AT5G58680" species... 140 9.8e-06 1
TAIR|locus:2130699 - symbol:AT4G16490 "AT4G16490" species... 153 1.5e-05 2
TAIR|locus:2198235 - symbol:AT1G01830 "AT1G01830" species... 151 2.3e-05 2
MGI|MGI:1918132 - symbol:Armc3 "armadillo repeat containi... 116 7.9e-05 3
ZFIN|ZDB-GENE-030616-533 - symbol:ankar "ankyrin and arma... 113 8.6e-05 3
TAIR|locus:2087565 - symbol:AT3G20170 species:3702 "Arabi... 123 0.00011 2
ASPGD|ASPL0000008980 - symbol:AN12408 species:162425 "Eme... 132 0.00017 1
UNIPROTKB|O93614 - symbol:rap1gds1-a "Rap1 GTPase-GDP dis... 102 0.00020 2
UNIPROTKB|Q7Z5J8 - symbol:ANKAR "Ankyrin and armadillo re... 135 0.00025 1
TAIR|locus:2162276 - symbol:PUB15 "Plant U-Box 15" specie... 131 0.00026 1
TAIR|locus:2013990 - symbol:AT1G71020 species:3702 "Arabi... 145 0.00026 2
DICTYBASE|DDB_G0270626 - symbol:armc8 "armadillo repeat-c... 118 0.00026 2
UNIPROTKB|Q5PPZ9 - symbol:rap1gds1-b "Rap1 GTPase-GDP dis... 98 0.00026 2
TAIR|locus:2100372 - symbol:PUB39 "PLANT U-BOX 39" specie... 92 0.00028 2
RGD|1306655 - symbol:Arvcf "armadillo repeat gene deleted... 105 0.00032 2
UNIPROTKB|E1C8F9 - symbol:E1C8F9 "Uncharacterized protein... 118 0.00035 2
MGI|MGI:109620 - symbol:Arvcf "armadillo repeat gene dele... 105 0.00035 3
UNIPROTKB|O75923 - symbol:DYSF "Dysferlin" species:9606 "... 135 0.00038 1
UNIPROTKB|O00192 - symbol:ARVCF "Armadillo repeat protein... 110 0.00046 2
TAIR|locus:2150295 - symbol:ARIA "ARM repeat protein inte... 128 0.00059 1
TAIR|locus:2141226 - symbol:PUB8 "plant U-box 8" species:... 124 0.00060 1
FB|FBgn0031905 - symbol:CG5155 species:7227 "Drosophila m... 97 0.00068 2
ZFIN|ZDB-GENE-070501-1 - symbol:dysf "dysferlin, limb gir... 132 0.00079 1
UNIPROTKB|F1SLE7 - symbol:DYSF "Uncharacterized protein" ... 131 0.00093 1
>TAIR|locus:2204700 [details] [associations]
symbol:AT1G77460 "AT1G77460" species:3702 "Arabidopsis
thaliana" [GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000225
InterPro:IPR000008 InterPro:IPR008973 InterPro:IPR016024
Pfam:PF00168 Pfam:PF00514 PROSITE:PS50176 SMART:SM00185
SMART:SM00239 EMBL:CP002684 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 InterPro:IPR018029 SUPFAM:SSF49562
PROSITE:PS50004 IPI:IPI00548388 RefSeq:NP_001185419.1
RefSeq:NP_177870.2 UniGene:At.34473 PRIDE:F4I718
EnsemblPlants:AT1G77460.1 EnsemblPlants:AT1G77460.2 GeneID:844082
KEGG:ath:AT1G77460 OMA:VAPSKEC Uniprot:F4I718
Length = 2136
Score = 6906 (2436.1 bits), Expect = 0., P = 0.
Identities = 1382/2136 (64%), Positives = 1650/2136 (77%)
Query: 3 MSKSPSPEPQAHGFSSTSQPRESNGTSAMDDPESTMSTVAKFLEQLHANMSSPQERELIT 62
M K+ P Q S+ Q + + MDDPE M+TVA+ +EQLHA SSPQ++EL T
Sbjct: 1 MLKAFLPGTQEEETLSSLQSGKVDAKMEMDDPEKAMATVAQLIEQLHAKTSSPQDKELTT 60
Query: 63 MRILTIAKAKKEARLLIGSHAQAMPLFISILRSGTPLAKVNVAATLSVLCKDEDLRLKVL 122
R+L IAK K+EAR LIGS+ QAMPLFIS+LR+GT LAKVNVA+ L VLCKD+DLRLKVL
Sbjct: 61 ARLLGIAKGKREARRLIGSYGQAMPLFISMLRNGTTLAKVNVASILCVLCKDKDLRLKVL 120
Query: 123 LGGCIPPLLSLLKSESTDTRKAAAEALYEVSSGGLSDDHVGMKIFVTEGVVPTLWDQLNP 182
LGGCIPPLLS+LKS + +TRKAAAEA+YEVSS G+S+DH+GMKIF+TEGVVPTLWDQL+
Sbjct: 121 LGGCIPPLLSVLKSGTMETRKAAAEAIYEVSSAGISNDHIGMKIFITEGVVPTLWDQLSL 180
Query: 183 KNKQDNVVQGFVTGALRNLCGDKDGYWRATLEAGGVDIIVGXXXXXXXXXXXXXXXXXXR 242
K QD VV+G+VTGALRNLCG DGYWR TLE GVDI+V R
Sbjct: 181 KGNQDKVVEGYVTGALRNLCGVDDGYWRLTLEGSGVDIVVSLLSSDNPNSQANAASLLAR 240
Query: 243 LMLAFGDSIPTVIDSGAVKALVQLVGQNNDIXXXXXXXXXXXXXXXXXXXXXXXXXXXDG 302
L+L+F DSI +++SG VK+L+QL+ Q NDI G
Sbjct: 241 LVLSFCDSIQKILNSGVVKSLIQLLEQKNDINVRASAADALEALSANSDEAKKCVKDAGG 300
Query: 303 VPVLIGAIVAPSKECMQGQRGQALQGHATRALANIYGGMPALVVYLGELSQSPRLAAPVA 362
V LI AIVAPSKECMQG+ GQ+LQ HAT ALAN++GGM L++YLG++SQSPRL P+
Sbjct: 301 VHALIEAIVAPSKECMQGKHGQSLQEHATGALANVFGGMRHLIIYLGQVSQSPRLTEPIG 360
Query: 363 DIIGALAYALMVFEQKSGVDDEPFDARQIEDILVMLLKPHDNKLVQERVLEAMASLYGNI 422
D+IGALAYALM+F+Q + FD IE ILV LLKP D KL+QER+LEAMASLYGN
Sbjct: 361 DVIGALAYALMIFKQPES-SENIFDPSVIESILVKLLKPRDTKLIQERILEAMASLYGNS 419
Query: 423 FLSQWVSHAEAKKVLIGLITMATADVREYLILSLTKLCRREVGIWEAIGKRXXXXXXXXX 482
LS ++ AEAK+VLI LITMA+ADVRE LI+ L+ LC +VGIWEAIGKR
Sbjct: 420 SLSCYLDDAEAKRVLIALITMASADVRERLIICLSGLCHDKVGIWEAIGKREGIQLFISF 479
Query: 483 XXXXXXXHQEYAVQLIAILTEQVDDSKWAITAAGGIPPLVQLLEAGSQKAREVAAHVLWI 542
HQEYAV+++ ILT QVDDSKWA+TAAGGIPPLVQLLE GSQKA+E AA +LW
Sbjct: 480 LGLSSEQHQEYAVEMLKILTAQVDDSKWAVTAAGGIPPLVQLLETGSQKAKEDAACILWN 539
Query: 543 LCCHSEDIRACVESAGAVPAFLWLLKSGGPKGQDASAMALTKLIRAADSATINQLLALLL 602
LCCHSE+IR CVE AG +PAFLWLLK+GGP Q+ SA L KL+ AD ATINQLLALLL
Sbjct: 540 LCCHSEEIRDCVERAGGIPAFLWLLKTGGPNSQETSAKTLVKLVHTADPATINQLLALLL 599
Query: 603 GDSPSSKAHVIKVLGHVLTMALQEDLVQKGSAANKGLRSLVQVLNSSNEENQEYAASVLA 662
GD P+SK VI+VLGHVL+ A QEDLV +G AANKGLRSLV+ L SS EE +E+ ASVLA
Sbjct: 600 GDDPTSKIQVIEVLGHVLSKASQEDLVHRGCAANKGLRSLVESLTSSREETKEHTASVLA 659
Query: 663 DLFSMRQDICGSLATDEIVNPCMRLLTSNTQMVATQSARALGALSRPTKTKTTNKMSYIA 722
DLFS RQDICG LATD+I+NP ++LLT+NTQ VA Q ARAL ALSRP K K SYIA
Sbjct: 660 DLFSSRQDICGHLATDDIINPWIKLLTNNTQNVAKQVARALDALSRPVKNNNNKKKSYIA 719
Query: 723 EGDVKPLIKLAKTSSIDXXXXXXXXXXXXXSDPDIAAEVLLEDVVSALTRVLAEGTSEGK 782
EGD+K LIKLAK SSI+ SDPDIAAE L EDVVSA TR+LA+G+ EGK
Sbjct: 720 EGDIKSLIKLAKNSSIESAENAVSALANLLSDPDIAAEALAEDVVSAFTRILADGSPEGK 779
Query: 783 KNASRALHQLLKHFPVGDVLKGNAQCRFVVLTLVDSLNAMDMNGTXXXXXXXXXXXXXRT 842
+NASRALHQLLK+FPV DVLKG+AQCRF +L+LVDSL ++D++ +T
Sbjct: 780 RNASRALHQLLKNFPVCDVLKGSAQCRFAILSLVDSLKSIDVDSADAFNILEVVALLAKT 839
Query: 843 KQGLNFTYPPWAALAEVPSSIEPLVCCLAEGPPPLQDKAIEILSRLCGDQPAVLGDFLMA 902
K G+NF+YPPW ALAEVPSS+E LV CLAEG +QDKAIE+LSRLC DQ +L + +++
Sbjct: 840 KSGVNFSYPPWIALAEVPSSLETLVQCLAEGHTLVQDKAIEVLSRLCSDQQFLLSELIVS 899
Query: 903 RSSSIGALADRIMHSSSLEVRVGGAALLICAAKEHKKQSMDALDLSGYLKPLIYALVDMM 962
R S+ LADRI+++SSLEVRVG ALL+CAAKE K+ + LD SG+LK L++ALVDM+
Sbjct: 900 RPKSMLVLADRIVNASSLEVRVGSTALLLCAAKEKKQLITETLDQSGFLKLLLHALVDMI 959
Query: 963 KQNSSCSSLDIEVRTPRGYMERTAFQEADDFDVPDPATILGGTVALWLLLIISSFLRNNN 1022
K NS+ SL+ EV+TP+G++E+ FQ+ F PDPA ILGGTVALWLL I++S +
Sbjct: 960 KHNSTSFSLETEVQTPKGFLEKNVFQDTGSFYFPDPAKILGGTVALWLLCILTSVDAKSK 1019
Query: 1023 VTVMEAGALEALSDKLASYTSNPQAEFEDTEGIWISALFLAILFQDANIVLSPATMRIIP 1082
V VMEAG LE L KLA YTS+ QAEFEDTEGIWISAL LAI+FQD N+ S TMRIIP
Sbjct: 1020 VIVMEAGGLEVLVGKLARYTSSAQAEFEDTEGIWISALLLAIMFQDDNVSFSSTTMRIIP 1079
Query: 1083 ALALLLRSDEVIDRFFAAQAMASLVCSGSKGIILAIANSGAVAGLITLIGHIESDTPNLV 1142
LA+LL SDE+IDR+FAA AMASLVC+ ++GI L IANSGAV+G+I L+G++ES+ NLV
Sbjct: 1080 TLAVLLGSDELIDRYFAAHAMASLVCTRNRGINLTIANSGAVSGIINLLGYVESEILNLV 1139
Query: 1143 ALSEEFFLVRYPDEVVLEKLFEIEDVRVGSTARKSIPLLVDILRPIPDRPGAPPVAVRLL 1202
AL+ EF LV+ PD+V+L+ LFEIEDVR+GSTARKSIPLLVD+LRPIPDRPGAP AV++L
Sbjct: 1140 ALANEFSLVKEPDQVILQHLFEIEDVRLGSTARKSIPLLVDLLRPIPDRPGAPQFAVQIL 1199
Query: 1203 TQIVDGSDTNKLIMAEAGGLDALTKYLSLSPQDSTEATITELFRILFSNPDLIRYEASLS 1262
+I DGSDTNKL+MAEAG ++ALTKYLSLSPQDSTE I+EL R+LFSN +L + E +LS
Sbjct: 1200 IRIADGSDTNKLLMAEAGAVEALTKYLSLSPQDSTEYAISELLRVLFSNHELRQNEMALS 1259
Query: 1263 SLNQLIAVLHXXXXXXXXXXXXXXHQLFDAENIKDSDLAGQAVPPLVDMXXXXXXXXXXX 1322
SLNQLIAVL ++LFDAENI++S++A QAV PL+D+
Sbjct: 1260 SLNQLIAVLRLGSRSARYSAAGALNELFDAENIRNSEIACQAVQPLMDILGSVSESEQEV 1319
Query: 1323 XXXXXXKLTSGNTSKACLLTDIDGNLLESLYKILSS-NSSLELKRNAAELCFIMFGNAKI 1381
KL+SGNTS LL D++G+LLE++ KILSS +S ELK NAA LC ++F N I
Sbjct: 1320 ALSALIKLSSGNTSNTALLIDVEGSLLENVIKILSSATASEELKINAARLCSVVFSNKNI 1379
Query: 1382 IANPIASECIQPLISLMQSDLSIVVESAVCAFERLLDDEQQVELVEGYDVVDLLVRLVSG 1441
+ AS C++PLI+LMQS+ S VE+AV A + LLDDEQ +EL +++ +LLV LVSG
Sbjct: 1380 RTSASASGCMKPLITLMQSERSAAVEAAVFAIKILLDDEQHLELAAAHNIQELLVGLVSG 1439
Query: 1442 TNHRLVEATVCALIKLGKDRTPRKLQMVKAGIIDNCLDLLPVAPSALCSTIAELFRILTN 1501
N+ ++EA++ ALIKLGKDR PRKL MV+AGII+ CL+LLP A S+LCS + ELFRILTN
Sbjct: 1440 KNYVIIEASLSALIKLGKDRVPRKLDMVEAGIIERCLELLPGASSSLCSAVVELFRILTN 1499
Query: 1502 SSAIARSSDAAKIVEPLFMVLLQPDFSLWGQHSALQALVNILEKPQSLVTLKLTPSQVIE 1561
S IAR D AK VEPLF VLL+ D +LWGQHSALQALVNILEK Q+L TPS+ I
Sbjct: 1500 SGVIARRPDVAKTVEPLFAVLLRSDLTLWGQHSALQALVNILEKQQTLEAFSFTPSEAIV 1559
Query: 1562 PLLSFLESPSHAIQQLGTELLTHLLAQEHFQQDITTKNAVVPLVQLAGIGILNLQQTAVK 1621
PL+SFLES S AIQQLG ELL+H L E FQQDITT++AVVPLV+LAGIGIL+LQ+TA+K
Sbjct: 1560 PLISFLESSSQAIQQLGAELLSHFLTMEDFQQDITTQSAVVPLVRLAGIGILSLQETAIK 1619
Query: 1622 ALEKISTSWPKAVADAGGIFEIAKVIIQDDPQPPHSLWESAALVLSNVLRFNTEYYFKVP 1681
ALEKIS SWPKAV DA GIFE++KVI+Q+DPQPP LWESAA VLSN+L+++ E +F+V
Sbjct: 1620 ALEKISASWPKAVLDAEGIFELSKVILQEDPQPPLDLWESAAFVLSNILQYDAECFFRVE 1679
Query: 1682 VVVLVKMLHSTLESTITVALNALLIHERTDASSAEQMTQAGVIDALLDLLRSHQCEETSG 1741
+ VLVK+L ST+EST+ +AL AL++HE+ DASS QM + G IDALLDLLRSHQCEE SG
Sbjct: 1680 LPVLVKLLFSTIESTVLLALKALMLHEKNDASSTVQMAELGAIDALLDLLRSHQCEEESG 1739
Query: 1742 RLLEALFNNGRIRQMKVSKYAIAPLSQYLLDPQTRSESGKXXXXXXXGDLSQHEGLXXXX 1801
LLE +FNN R+R++K+ KYAIAPLSQYLLDP TRSE G+ GDLSQHEGL
Sbjct: 1740 SLLEVIFNNPRVRELKLCKYAIAPLSQYLLDPHTRSEPGRLLAALALGDLSQHEGLSRSS 1799
Query: 1802 XXXXXXXXLISLLEDQSTDEMKMVAICALQNFVMCSRTNRRAVAEAGGILVVQELLLSTN 1861
LIS+LE+Q T+EMK+VAICALQNFVM SRTNRRAVAEAGG+L++QELLLS N
Sbjct: 1800 GSVSACRALISVLEEQPTEEMKVVAICALQNFVMNSRTNRRAVAEAGGVLLIQELLLSCN 1859
Query: 1862 AEVAGQAALLTKFLFSNHTLQEYVSNELIRSLTAALERELWSTATINEEVLRTLHVIFMN 1921
EV+GQAAL+ KFLFSNHTLQEYVSNELIRSLTAALER LWSTATIN EVLRTL+VIF N
Sbjct: 1860 PEVSGQAALMVKFLFSNHTLQEYVSNELIRSLTAALERGLWSTATINIEVLRTLNVIFSN 1919
Query: 1922 FPKLHTSEAATLCIPHLVGALKSGSEAAQGSVLDTLCLLRNSWSTMPIDVAKSQAMIAAE 1981
FPKL SEAAT CIPHLVGALKSG E QG VLD L LLR+SW+ M IDVAKSQAMIAAE
Sbjct: 1920 FPKLRASEAATFCIPHLVGALKSGVEDVQGLVLDILYLLRHSWTNMSIDVAKSQAMIAAE 1979
Query: 1982 AIPILQMLMKTCPPSFHERADSLLHCLPGCLTVTIKRGNNLKQTMGTTNAFCRLTIGNGP 2041
AIP+LQMLMKTCPP FH++ADSLLHCLPGCLTV + R NNLKQ+M TTNAFC+LTIGN P
Sbjct: 1980 AIPVLQMLMKTCPPRFHDKADSLLHCLPGCLTVNVMRANNLKQSMATTNAFCQLTIGNCP 2039
Query: 2042 PRQTKVVSHSISPEWKEGFTWAFDVPPKGQKLHIICKSKNTFGKSTLGKVTIQIDKVVTE 2101
PRQTKVVS+S +PEWKEGFTWAFDVPPKGQKLHIICKSK+TFGK+TLG+VTIQIDKVVTE
Sbjct: 2040 PRQTKVVSNSTTPEWKEGFTWAFDVPPKGQKLHIICKSKSTFGKTTLGRVTIQIDKVVTE 2099
Query: 2102 GVYSGLFNLNHDNNKDSSSRTLEIEIIWSNRISDES 2137
G YSG +LNH+N+KD+SSR+L+IEI WSNR +DE+
Sbjct: 2100 GEYSGSLSLNHENSKDASSRSLDIEIAWSNRTTDET 2135
>TAIR|locus:2205866 [details] [associations]
symbol:AT1G44120 species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0030048 "actin filament-based
movement" evidence=RCA] InterPro:IPR000225 InterPro:IPR000008
InterPro:IPR008973 InterPro:IPR016024 Pfam:PF00168 SMART:SM00185
SMART:SM00239 EMBL:CP002684 GenomeReviews:CT485782_GR
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 EMBL:AC074228
SUPFAM:SSF49562 IPI:IPI00525139 PIR:E96505 RefSeq:NP_175078.1
UniGene:At.38851 ProteinModelPortal:Q9C6Y4 SMR:Q9C6Y4 PaxDb:Q9C6Y4
PRIDE:Q9C6Y4 EnsemblPlants:AT1G44120.1 GeneID:841015
KEGG:ath:AT1G44120 TAIR:At1g44120 eggNOG:NOG319897
HOGENOM:HOG000029638 InParanoid:Q9C6Y4 OMA:RNASHAL PhylomeDB:Q9C6Y4
ProtClustDB:PLN03200 Genevestigator:Q9C6Y4 Uniprot:Q9C6Y4
Length = 2114
Score = 5257 (1855.6 bits), Expect = 0., P = 0.
Identities = 1080/2116 (51%), Positives = 1425/2116 (67%)
Query: 28 TSAMDDPESTMSTVAKFLEQLHANMSSPQERELITMRILTIAKAKKEARLLIGSHAQAMP 87
TS MDDPE T+ + +EQLHA SS QE+EL T R+L +AK KKE R +I + AMP
Sbjct: 2 TSEMDDPEKAAVTITRLIEQLHAKKSSAQEKELSTARLLGLAKGKKECRKIISQNVNAMP 61
Query: 88 LFISILRSGTPLAKVNVAATLSVLCKDEDLRLKVLLGGCIPPLLSLLKSESTDTRKAAAE 147
FIS+LRSGT LAK+N A+ L+VLCKD+++R K+L+GGCIPPLLSLLKS+S D ++ AE
Sbjct: 62 AFISLLRSGTLLAKLNSASVLTVLCKDKNVRSKILIGGCIPPLLSLLKSDSVDAKRVVAE 121
Query: 148 ALYEVSSGGLSDDHVGMKIFVTEGVVPTLWDQLNPKNKQDNVVQGFVTGALRNLCGDKDG 207
A+YEVS G+ D+VG KIFVTEGVVP+LWDQL KQD V+G + GALRNLCGDKDG
Sbjct: 122 AIYEVSLCGMDGDNVGTKIFVTEGVVPSLWDQLKTGKKQDKTVEGHLVGALRNLCGDKDG 181
Query: 208 YWRATLEAGGVDIIVGXXXXXXXXXXXXXXXXXXRLMLAFGDSIPTVIDSGAVKALVQLV 267
+W TLE GGVDII+ RL+ F SI V +SGAV+ LVQL+
Sbjct: 182 FWALTLEDGGVDIILKLLQSSNPVSQSNAASLLARLIRIFTSSISKVEESGAVQVLVQLL 241
Query: 268 GQNNDIXXXXXXXXXXXXXXXXXXXXXXXXXXXDGVPVLIGAIVAPSKECMQGQRGQALQ 327
G+ N + DG+ +LI A+VA SKE ++ + + LQ
Sbjct: 242 GEENSVFVRASVVNALEAITSKSEEAITVARDLDGIHLLISAVVASSKESVEEETERVLQ 301
Query: 328 GHATRALANIYGGMPALVVYLGELSQSPRLAAPVADIIGALAYALMVFEQKSGVDDEPFD 387
+ T+ALAN+ GGM L+VYLG LS SPRL P+ADI+GALAYAL F+ G E FD
Sbjct: 302 SYGTQALANLCGGMSGLIVYLGGLSLSPRLTEPIADILGALAYALRKFQLSCGDTREAFD 361
Query: 388 ARQIEDILVMLLKPHDNKLVQERVLEAMASLYGNIFLSQWVSHAEAKKVLIGLITMATAD 447
E ILV LLKP D +L+ ER+LEAM SL+GN+ LS+ +++ +AK+VL+ L +AT
Sbjct: 362 PTLTEGILVKLLKPRDTQLIHERILEAMESLFGNVDLSKLLNNVDAKRVLVCLTILATDG 421
Query: 448 VREYLILSLTKLCRREVGIWEAIGKRXXXXXXXXXXXXXXXXHQEYAVQLIAILTEQVDD 507
RE +I L+ LC+ +W+AIGKR HQE +V+ +AILT+ V++
Sbjct: 422 PRERMITCLSNLCKHG-DVWDAIGKREGIQILIPYLGLSSEQHQELSVEFLAILTDNVEE 480
Query: 508 SKWAITAAGGIPPLVQLLEAG-SQKAREVAAHVLWILCCHSEDIRACVESAGAVPAFLWL 566
S+WA+T+AGGIPPL+Q+LE G SQKA++ A V+ LCCHSE+IR CVE AGA+PA L L
Sbjct: 481 SRWAVTSAGGIPPLLQILETGVSQKAKDDAVRVILNLCCHSEEIRLCVEKAGAIPALLGL 540
Query: 567 LKSGGPKGQDASAMALTKLIRAADSATINQLLALLLGDSPSSKAHVIKVLGHVLTMALQE 626
LK+GGPK Q++SA L KLI+ AD + I Q+ AL LGD+P SK H+I+VLGHVL A E
Sbjct: 541 LKNGGPKSQESSANTLLKLIKTADPSVIEQVQALFLGDAPKSKTHLIRVLGHVLASASLE 600
Query: 627 DLVQKGSAANKGLRSLVQVLNSSNEENQEYAASVLADLFSMRQDICGSLATDEIVNPCMR 686
+ V KGSAAN GLRSLVQ L SSNE+ +E AASVLADLFS R+D+CG L DE NPC +
Sbjct: 601 EFVTKGSAANNGLRSLVQRLASSNEKMKENAASVLADLFSSRKDLCGGLGFDEDDNPCTK 660
Query: 687 LLTSNTQMVATQSARALGALSRPTKTKT-TNKMSYIAEGDVKPLIKLAKTSSIDXXXXXX 745
LL+ NT VATQ A ALG+LS PTK KT T K+S +KPLIK AKT+ I+
Sbjct: 661 LLSGNTHAVATQLAHALGSLSNPTKKKTATKKLSGPEVEVIKPLIKSAKTNPIESTENPM 720
Query: 746 XXXXXXXSDPDIAAEVLLEDVVSALTRVLAEGTSEGKKNASRALHQLLKHFPVGDVLKGN 805
SDP++AAE L +DVVSALTRVL EGT +GK+NAS ALHQLLKHF V DV KGN
Sbjct: 721 STLANLLSDPNVAAEALNDDVVSALTRVLREGTLQGKRNASHALHQLLKHFQVSDVFKGN 780
Query: 806 AQCRFVVLTLVDSLNAMDMNGTXXXXXXXXXXXXXRTKQGLNFTYPPWAALAEVPSSIEP 865
QCRF V L+D LNA D+N + + K G N ++ P++A EVPS+++
Sbjct: 781 EQCRFAVSELIDLLNATDLNNSAFIDVLEVLSLLAKAKYGANLSHNPFSAFGEVPSNLDS 840
Query: 866 LVCCLAEGPPPLQDKAIEILSRLCGDQPAVLGDFLMARSSSIGALADRIMHSSSLEVRVG 925
LV LAEG P +QDKAIEILSR C Q +LG L+ +S SI +LA+R ++SSS E++VG
Sbjct: 841 LVRGLAEGHPLVQDKAIEILSRFCKTQFILLGRLLVTQSKSISSLANRTINSSSPEIKVG 900
Query: 926 GAALLICAAKEHKKQSMDALDLSGYLKPLIYALVDMMKQNSSCSSLDIEVRTPRGYMERT 985
GA LL+CAAK +A++ SGYLK L+ L+DM KQNS +S IE++ PR ++
Sbjct: 901 GAILLVCAAKNDITLWAEAVEQSGYLKTLVNTLLDMSKQNSKSASYGIEIQRPRSFITSN 960
Query: 986 AFQEADDFDVPDPATILGGTVALWLLLIISSFLRNNNVTVMEAGALEALSDKLASYTSNP 1045
DD ++ DP TILG T ++WLL II S +N + VME LE +++ L SN
Sbjct: 961 LCLRMDDSEMVDPVTILGSTASMWLLSIICSSHPSNRLVVMEGNGLEIIAENLQRNKSNT 1020
Query: 1046 QAEFEDTEGIWISALFLAILFQDANIVLSPATMRIIPALALLLRSDEVIDRFFAAQAMAS 1105
Q D+E WI+ FLA++ Q+ +V SPAT I+ LA ++S+++ID +F AQ +A+
Sbjct: 1021 QENSSDSEEKWIAMSFLAVMSQEPKVVSSPATENILQTLAPFMQSEQMIDGYFTAQVLAA 1080
Query: 1106 LVCSGSKGIILAIANSGAVAGLITLIGHIESDTPNLVALSEEFFLVRYPDEVVLEKLFEI 1165
LV + I I NS V I L+G ESDT +L AL+EE LV+ P E LE LFE
Sbjct: 1081 LVRHKNDKTISEIMNSDIVETTINLVGCEESDTRSLCALAEELSLVQNPYEATLEVLFEN 1140
Query: 1166 EDVRVGSTARKSIPLLVDILRPIPDRPGAPPVAVRLLTQIVDGSDTNKLIMAEAGGLDAL 1225
E VR GS +K IPLLV++L+P D+ G PVA+RLL +I D D +KL++AEAG LDAL
Sbjct: 1141 ERVRSGSFTKKCIPLLVNLLKPYADKVGGIPVAIRLLRRIADNDDLSKLLIAEAGALDAL 1200
Query: 1226 TKYLSLSPQDSTEATITELFRILFSNPDLIRYEASLSSLNQLIAVLHXXXXXXXXXXXXX 1285
KYLSLSPQDSTE T++EL LF +P++ R++ ++SS+ QLI +LH
Sbjct: 1201 AKYLSLSPQDSTEITVSELLESLFRSPEITRHKTAISSMKQLIGILHLASRSTRYNAARV 1260
Query: 1286 XHQLFDAENIKDSDLAGQAVPPLVDMXXXXXXXXXXXXXXXXXKLTSGNTSKACLLTDID 1345
+LF +E+I+DS+LA +A+ PL++M KLT G + +LT ++
Sbjct: 1261 LCELFSSEHIRDSELAWKALSPLIEMLNTTLESERVAALTALVKLTMGINPRPDILTSLE 1320
Query: 1346 GNLLESLYKILS-SNSSLELKRNAAELCFIMFGNAKIIANPIASECIQPLISLMQSDLSI 1404
GN L+++YKILS +SSLE K +AA +C +F N + + A+ CI LISL+++ S
Sbjct: 1321 GNPLDNIYKILSLDSSSLESKTSAARICRFLFTNEGLRTSTSAACCIVSLISLIRTGKST 1380
Query: 1405 VVESAVCAFERLLDDEQQVELVEGYDVVDLLVRLVSGTNHRLVEATVCALIKLGKDRTPR 1464
+E+ + A +RLLD ++ VE+ E +D V+L V+ N+ + EA + L K+ KD TPR
Sbjct: 1381 AIEAGMFALDRLLDIKRFVEVAEEHDCVNLFYGYVASENYLISEAAISCLTKMAKDNTPR 1440
Query: 1465 KLQMVKAGIIDNCLDLLPVAP-SALCSTIAELFRILTNSSAIARSSDAAKIVEPLFMVLL 1523
K+ ++K GII+ C+ L +P S+LCS IA+LFR+LTN IARS DA K+V+PL ++LL
Sbjct: 1441 KMDLIKMGIIEKCISQLSKSPPSSLCSVIADLFRVLTNVGVIARSQDAIKMVQPLLLILL 1500
Query: 1524 QPDFSLWGQHSALQALVNILEKPQSLVTLKLTPSQVIEPLLSFLESPSHAIQQLGTELLT 1583
+ D GQ LQA+ NILEKP L +LK+ S +I PL+ LES S A++ T LLT
Sbjct: 1501 RQDLDFQGQLGGLQAIANILEKPMVLESLKIASSTIIMPLIPLLESESIAVKNATTILLT 1560
Query: 1584 HLLAQEHFQQDITTKNAVVPLVQLAGIGILNLQQTAVKALEKISTSWPKAVADAGGIFEI 1643
LL + FQ++ITTKN + PLV+L GI + NLQ+ A+ LE+ S +WPK VAD GGI E+
Sbjct: 1561 SLLEMQRFQEEITTKNLIAPLVKLVGIRVRNLQEIALMGLERSSVTWPKEVADTGGIQEL 1620
Query: 1644 AKVIIQDDPQPPHSLWESAALVLSNVLRFNTE-YYFKVPVVVLVKMLHSTLESTITVALN 1702
+KVII +DPQ P LWESAA +L N+LR N E YYF V + VL KML ST EST+ +A++
Sbjct: 1621 SKVIIDEDPQLPVYLWESAAFILCNILRINPEHYYFTVTIPVLSKMLFSTAESTVILAID 1680
Query: 1703 ALLIHERTDASSAEQMTQAGVIDALLDLLRSHQCEETSGRLLEALFNNGRIRQMKVSKYA 1762
AL+I E D+SS ++M ++ +DALLDLLRSH CEE S RLLE + N ++R+ K+ ++
Sbjct: 1681 ALIIRENQDSSSVQEMAESSALDALLDLLRSHHCEELSARLLELILRNPKVRETKICQFV 1740
Query: 1763 IAPLSQYLLDPQTRSESGKXXXXXXXGDLSQHEGLXXXXXXXXXXXXLISLLEDQSTDEM 1822
+ PLS+Y+LDP T SES K GD+SQHEGL LISLLED+ ++EM
Sbjct: 1741 LTPLSEYILDPDTISESAKILIAMALGDISQHEGLAKATDSPVACRALISLLEDEPSEEM 1800
Query: 1823 KMVAICALQNFVMCSRTNRRAVAEAGGILVVQELLLSTNAEVAGQAALLTKFLFSNHTLQ 1882
+MV + AL+NF M SRT+R+A+AEAGG+ VQE+L S+N +V+ QAAL+ K LFSNHTLQ
Sbjct: 1801 QMVVMRALENFAMHSRTSRKAMAEAGGVYWVQEMLRSSNPQVSTQAALIIKSLFSNHTLQ 1860
Query: 1883 EYVSNELIRSLTAALERELWSTATINEEVLRTLHVIFMNFPKLHTSEAATLCIPHLVGAL 1942
EYVS E+I+SLT A+ERE W+T IN E++RTL+ I FPKL +SEAAT CIPHL+GAL
Sbjct: 1861 EYVSGEIIKSLTNAMEREFWTTTAINVEIVRTLNTILTTFPKLRSSEAATACIPHLIGAL 1920
Query: 1943 KSGSEAAQGSVLDTLCLLRNSWSTMPIDVAKSQAMIAAEAIPILQMLMKT-----CPPSF 1997
KSG + A+ S +DT+ LR SW+TMP + A+SQA++AA+AIP+LQ++MK+ P SF
Sbjct: 1921 KSGEQEARDSAMDTIYTLRQSWTTMPTETARSQAVLAADAIPVLQLMMKSKLKSPAPSSF 1980
Query: 1998 HERADSLLHCLPGCLTVTIKRGNNLKQTMGTTNAFCRLTIGNGPPRQTKVVSHSISPEWK 2057
HER +SLL+CLPG LTV IKRG+NLK++ NAFCRL I N P ++TKVV S SP WK
Sbjct: 1981 HERGNSLLNCLPGSLTVAIKRGDNLKRS----NAFCRLIIDNCPTKKTKVVKRSSSPVWK 2036
Query: 2058 EGFTWAFDVPPKGQKLHIICKSKNTFGKSTLGKVTIQIDKVVTEGVYSGLFNLNHDNNKD 2117
E FTW F PP+GQ L I+CKS N F LGKV I IDKV++EG YSG+F LN ++ KD
Sbjct: 2037 ESFTWDFAAPPRGQFLEIVCKSNNIFRNKNLGKVRIPIDKVLSEGSYSGIFKLNDESKKD 2096
Query: 2118 SSS-RTLEIEIIWSNR 2132
+SS R+LEIEI+WSN+
Sbjct: 2097 NSSDRSLEIEIVWSNQ 2112
>TAIR|locus:2827868 [details] [associations]
symbol:CSI1 "cellulose synthase-interactive protein 1"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0005829 "cytosol" evidence=RCA] [GO:0009506 "plasmodesma"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0030244
"cellulose biosynthetic process" evidence=IMP] [GO:0009832
"plant-type cell wall biogenesis" evidence=RCA] [GO:0016049 "cell
growth" evidence=RCA] [GO:0030243 "cellulose metabolic process"
evidence=RCA] [GO:0051211 "anisotropic cell growth" evidence=IMP]
InterPro:IPR000225 InterPro:IPR000008 InterPro:IPR008973
InterPro:IPR016024 Pfam:PF00168 Pfam:PF00514 PROSITE:PS50176
SMART:SM00185 SMART:SM00239 GO:GO:0005886 GO:GO:0009506
GO:GO:0005737 EMBL:CP002685 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 InterPro:IPR018029 SUPFAM:SSF49562
PROSITE:PS50004 GO:GO:0030244 GO:GO:0051211 IPI:IPI00540999
RefSeq:NP_179803.4 UniGene:At.24341 PRIDE:F4IIM1 DNASU:816747
EnsemblPlants:AT2G22125.1 GeneID:816747 KEGG:ath:AT2G22125
OMA:RGARYSA Uniprot:F4IIM1
Length = 2150
Score = 4531 (1600.1 bits), Expect = 0., P = 0.
Identities = 944/2141 (44%), Positives = 1369/2141 (63%)
Query: 1 MQMSKSPSPEPQAHGFSSTSQPRESNGTSAMDDPESTMSTVAKFLEQLHANMSSPQEREL 60
M+M S P P H ST++ + T++M+DP+ T+++VA+ +EQL SS QERE
Sbjct: 28 MKMHDSEPPTP--H---STTKMSLRDRTTSMEDPDGTLASVAQCIEQLRQGSSSAQEREY 82
Query: 61 ITMRILTIAKAKKEARLLIGSHAQAMPLFISILRSGTPLAKVNVAATLSVLCKDEDLRLK 120
++L + + ++ A +GSH+QA+P+ +S+LRSG+ K+ A L LCK+ +LR+K
Sbjct: 83 CLKQLLDLIEMRENAFSAVGSHSQAVPVLVSLLRSGSVGVKIQAATVLGSLCKENELRVK 142
Query: 121 VLLGGCIPPLLSLLKSESTDTRKAAAEALYEVSSGGLSDDHVGMKIFVTEGVVPTLWDQL 180
VLLGGCIPPLL LLKS S + + AAA+ +Y VS GG+ D HVG KIF TEGVVP LWDQL
Sbjct: 143 VLLGGCIPPLLGLLKSSSVEGQIAAAKTIYAVSEGGVKD-HVGSKIFSTEGVVPVLWDQL 201
Query: 181 NPKNKQDNVVQGFVTGALRNLCGDKDGYWRATLEAGGVDIIVGXXXXXXXXXXXXXXXXX 240
NK+ V G +TGAL+NL +G+W T+ AGGVD++V
Sbjct: 202 RSGNKKGEV-DGLLTGALKNLSSTTEGFWSETIRAGGVDVLVKLLTSGQSSTLSNVCFLL 260
Query: 241 XRLMLAFGDSIPTVIDSGAVKALVQLVGQNNDIXXXXXXXXXXXXXXXXXXXXXXXXXXX 300
+M+ +V+ + K L++L+G N+
Sbjct: 261 ACMMMEDASVCSSVLTADITKQLLKLLGSGNEAPVRAEAAAALKSLSAQSKEAKREIANS 320
Query: 301 DGVPVLIGAIVAPSKECMQGQRGQALQGHATRALANIYGGMPALVVYLGELSQSPRLAAP 360
+G+PVLI A +APSKE MQG+ QALQ +A ALANI GG+ ++ LG+ +S A
Sbjct: 321 NGIPVLINATIAPSKEFMQGEYAQALQENAMCALANISGGLSYVISSLGQSLESCSSPAQ 380
Query: 361 VADIIGALAYALMVFEQKSGVDDEPFDARQIEDILVMLLKPHDNKLVQERVLEAMASLYG 420
AD +GALA ALM+++ K+ D +E L+ KP LVQER +EA+ASLYG
Sbjct: 381 TADTLGALASALMIYDGKAETT-RASDPLVVEQTLLKQFKPRLPFLVQERTIEALASLYG 439
Query: 421 NIFLSQWVSHAEAKKVLIGLITMATADVREYLILSLTKLCRREVGIWEAIGKRXXXXXXX 480
N LS +S+++AK++L+GLITMA +V++ L+ +L LC E +W+A+ R
Sbjct: 440 NSILSVKLSNSDAKRLLVGLITMAVNEVQDELVKALLMLCNHEGSLWQALQGREGIQLLI 499
Query: 481 XXXXXXXXXHQEYAVQLIAILTEQVDDSKWAITAAGGIPPLVQLLEAGSQKAREVAAHVL 540
QE AV L+ +L+ + D+SKWAITAAGGIPPLVQ+LE GS KARE +A +L
Sbjct: 500 SLLGLSSEQQQECAVALLCLLSNENDESKWAITAAGGIPPLVQILETGSAKAREDSATIL 559
Query: 541 WILCCHSEDIRACVESAGAVPAFLWLLKSGGPKGQDASAMALTKLIRAADSATINQLLAL 600
LC HSEDIRACVESA AVPA LWLLK+G P G++ +A L LI +D+ATI+QL AL
Sbjct: 560 RNLCNHSEDIRACVESADAVPALLWLLKNGSPNGKEIAAKTLNHLIHKSDTATISQLTAL 619
Query: 601 LLGDSPSSKAHVIKVLGHVLTMALQEDLVQKGSAANKGLRSLVQVLNSSNEENQEYAASV 660
L D P SK +V+ L +L++ D++++GSA+N + +++++++S EE Q +AS
Sbjct: 620 LTSDLPESKIYVLDALKSMLSVVPFNDMLREGSASNDAIETMIKLMSSGKEETQANSASA 679
Query: 661 LADLFSMRQDICGSLATDEIVNPCMRLLTSNTQMVATQSARALGALSRPTKTKTTNKMSY 720
LA +F R+D+ S + + ++LL +++ + +S R L A+ K N+
Sbjct: 680 LAAIFQSRKDLRESALALKTLLSAIKLLNVDSERILVESCRCLAAILLSIKE---NRDVA 736
Query: 721 IAEGDVKP-LIKLAKTSSIDXXXXXXXXXXXXXSDPDIAAEVLLEDVVSALTRVLAEGTS 779
I+ + P ++ LA +S ++ D +++ +V++ED++ + TR+L EGT
Sbjct: 737 ISAREALPTIVSLANSSVLEVAEQGMCALANLILDSEVSEKVIVEDIILSATRILREGTV 796
Query: 780 EGKKNASRALHQLLKHFPVGDVLKGNAQCRFVVLTLVDSLNAMDMNGTXXXXXXXXXXXX 839
GK A+ A+ +LL + L + VLTLV L + D G
Sbjct: 797 SGKTLAAAAIARLLSRRRIDSALTDSVNRAGTVLTLVSLLESAD--GRSDAISEALDALA 854
Query: 840 XRTKQGLNFTYPP-WAALAEVPSSIEPLVCCLAE-GPPPLQDKAIEILSRLCGDQPAVLG 897
++ G N P WA LAE P+S+ P+V + P LQDKAIE+LSRLC DQP VLG
Sbjct: 855 IFSRSGANGNVKPAWAVLAESPNSMAPIVSSIVSVANPSLQDKAIEVLSRLCRDQPIVLG 914
Query: 898 DFLMARSSSIGALADRIMHSSSLEVRVGGAALLICAAKEHKKQSMDALDLSGYLKPLIYA 957
+ + + ++A R++++ ++++GGAA++ICAAK ++ ++ L+ + + A
Sbjct: 915 NMVNNARDCVSSIAKRVINTRDPKIKIGGAAIIICAAKVDDQKMIENLNETQLCAKFVQA 974
Query: 958 LVDMMK--QNSSCSSLD---IEVRTPRGYMERTAFQEADDFDVPDPATILGG-TVALWLL 1011
LV ++ Q+ D I + P+ E + ++ + AT++ G +A+WLL
Sbjct: 975 LVGILDSVQDQEKDEKDKICICIH-PKEKEEDEEEEATENREGSTGATVISGDNLAIWLL 1033
Query: 1012 LIISSFLRNNNVTVMEAGALEALSDKLASYTSNPQAEFEDTEGIWISALFLAILFQDANI 1071
++S + ++E+ +E ++D++ + QA+ + IW+ AL LAILFQD I
Sbjct: 1034 SVLSCHDEKSRAVILESEGIELITDRIGNRFL--QADNGEDANIWVCALLLAILFQDREI 1091
Query: 1072 VLSPATMRIIPALALLLRSDEVIDRFFAAQAMASLVCSGSKGIILAIANSGAVAGLITLI 1131
+ ATM+ +P L+ L++S+E DR+FAAQA+ASLVC+GS+G +L++ANSGA AG I+L+
Sbjct: 1092 TRAHATMKAVPVLSNLVKSEEYADRYFAAQALASLVCNGSRGTLLSVANSGAAAGFISLL 1151
Query: 1132 GHIESDTPNLVALSEEFFLVRYPDEVVLEKLFEIEDVRVGSTARKSIPLLVDILRPIPDR 1191
G + D L+ LS+EF LVRYPD+V LE+LF +ED+RVG+T+RK+IPLLV++L+PIPDR
Sbjct: 1152 GCSDDDIKELLQLSQEFTLVRYPDQVALERLFRVEDIRVGATSRKAIPLLVELLKPIPDR 1211
Query: 1192 PGAPPVAVRLLTQIVDGSDTNKLIMAEAGGLDALTKYLSLSPQDSTEATITELFRILFSN 1251
PGAP +++ LLTQ+ N ++M E+G L+ L+KYLSL PQD E T L ILFS+
Sbjct: 1212 PGAPLLSLNLLTQLAGDCPQNMIVMVESGALEGLSKYLSLGPQDEQEEAATGLLGILFSS 1271
Query: 1252 PDLIRYEASLSSLNQLIAVLHXXXXXXXXXXXXXXHQLFDAENIKDSDLAGQAVPPLVDM 1311
++ R+E++ +++QL+AVL LF A++I++++ + QAV PLV++
Sbjct: 1272 AEIRRHESAFGAVSQLVAVLRLGGRGARYSAAKALDSLFTADHIRNAESSRQAVQPLVEI 1331
Query: 1312 XXXXXXXXXXXXXXXXXKLTSGNTSKACLLTDIDGNLLESLYKILSSNSSLELKRNAAEL 1371
+L S N S+A + D++ N ++ L +ILSSN ++ELK +AAEL
Sbjct: 1332 LNTGSEREQHAAIAALVRLLSDNPSRALAVADVEMNAVDVLCRILSSNYTMELKGDAAEL 1391
Query: 1372 CFIMFGNAKIIANPIASECIQPLISLMQSDLSIVVESAVCAFERLLDDEQQVELVEGYDV 1431
C+++F N +I + A+ C++PL+SL+ ++ S S V A ++L+DDEQ ELV +
Sbjct: 1392 CYVLFANTRIRSTVAAARCVEPLVSLLVTEFSPAQHSVVRALDKLVDDEQLAELVAAHGA 1451
Query: 1432 VDLLVRLVSGTNHRLVEATVCALIKLGKDRTPRKLQMVKAGIIDNCLDLLPVAPSALCST 1491
V LV L+ G N+ L EA AL+KLGKDR KL+MVKAG+ID LD+L AP LC+
Sbjct: 1452 VVPLVGLLYGKNYVLHEAISRALVKLGKDRPACKLEMVKAGVIDCVLDILHEAPDFLCAA 1511
Query: 1492 IAELFRILTNSSAIARSSDAAKIVEPLFMVLLQPDFSLWGQHSALQALVNILEKPQSLVT 1551
+EL RILTN++ IA+ AAK+VEPLF +L + +F GQHSALQ LVNILE PQ
Sbjct: 1512 FSELLRILTNNATIAKGQSAAKVVEPLFHLLTRLEFGADGQHSALQVLVNILEHPQCRAD 1571
Query: 1552 LKLTPSQVIEPLLSFLESPSHAIQQLGTELLTHLLAQEHFQQDITTKNAVVPLVQLAGIG 1611
LTP QVIEPL+ LESPS A+QQL ELL+HLL +EH Q+D T+ A+ PL+ + G G
Sbjct: 1572 YTLTPHQVIEPLIPLLESPSPAVQQLAAELLSHLLYEEHLQKDPLTQLAIGPLIHVLGSG 1631
Query: 1612 ILNLQQTAVKALEKISTSWPKAVADAGGIFEIAKVIIQDDPQPPHSLWESAALVLSNVLR 1671
I LQQ AVKAL I+ +WP +A GG+ E++KVI+Q DP + LWESAA +L +L+
Sbjct: 1632 IHLLQQRAVKALVSIALTWPNEIAKEGGVSELSKVILQADPSLSNVLWESAASILVIILQ 1691
Query: 1672 FNTEYYFKVPVVVLVKMLHSTLESTITVALNALLIHERTDASSAEQMTQAGVIDALLDLL 1731
F++E+Y +VPV VLV++L S E+T+ ALNALL+ E D +SAE M ++G I+ALLDLL
Sbjct: 1692 FSSEFYLEVPVAVLVRLLRSASENTVVGALNALLVLESDDGTSAESMAESGAIEALLDLL 1751
Query: 1732 RSHQCEETSGRLLEALFNNGRIRQMKVSKYAIAPLSQYLLDPQTRSESGKXXXXXXXGDL 1791
RSHQCE+T+ RLLE L NN +IR K +K AI PLSQYLLDPQT+++ + GDL
Sbjct: 1752 RSHQCEDTAARLLEVLLNNVKIRDSKATKTAILPLSQYLLDPQTQAQQARLLATLALGDL 1811
Query: 1792 SQHEGLXXXXXXXXXXXXLISLLEDQSTDEMKMVAICALQNFVMCSRTNRRAVAEAGGIL 1851
Q+E L L+++LE+Q T+EMK+VAICALQN VM SR+N+RAVAEAGG+
Sbjct: 1812 FQNEALARSTDAASACRALVNVLEEQPTEEMKVVAICALQNLVMYSRSNKRAVAEAGGVQ 1871
Query: 1852 VVQELLLSTNAEVAGQAALLTKFLFSNHTLQEYVSNELIRSLTAALERELWSTATINEEV 1911
VV +L+ S++ E + QAA+ K LFSNHT+QEY S+E +R++TAA+E++LW+T T+N+E
Sbjct: 1872 VVLDLISSSDPETSVQAAMFVKLLFSNHTVQEYASSETVRAITAAIEKDLWATGTVNDEY 1931
Query: 1912 LRTLHVIFMNFPKLHTSEAATLCIPHLVGALKSGSEAAQGSVLDTLCLLRNSWSTMPIDV 1971
L+ L+ +F NFP+L +E ATL IPHLV +LK+GSEA Q + LD L LLR +WS P +V
Sbjct: 1932 LKALNSLFNNFPRLRATEPATLSIPHLVTSLKTGSEATQEAALDALFLLRQAWSACPAEV 1991
Query: 1972 AKSQAMIAAEAIPILQMLMKTCPPSFHERADSLLHCLPGCLTVTIKRGNNLKQTMGTTNA 2031
+++Q++ AA+AIP+LQ L+++ PP F E+A+ LL CLPG L VTIKRGNN+KQ++G +
Sbjct: 1992 SRAQSVAAADAIPLLQYLIQSGPPRFQEKAEFLLQCLPGTLVVTIKRGNNMKQSVGNPSV 2051
Query: 2032 FCRLTIGNGPPRQTKVVSHSISPEWKEGFTWAFDVPPKGQKLHIICKSKNTFGKSTLGKV 2091
FC++T+GN PPRQTKV+S +PEW E F+W+F+ PPKGQKLHI CK+K+ GKS+ GKV
Sbjct: 2052 FCKITLGNNPPRQTKVISTGPNPEWDESFSWSFESPPKGQKLHISCKNKSKMGKSSFGKV 2111
Query: 2092 TIQIDKVVTEGVYSGLFNLNHDNNKDSSSRTLEIEIIWSNR 2132
TIQID+VV G +G ++L ++ S R LEIE WSN+
Sbjct: 2112 TIQIDRVVMLGAVAGEYSLLPESK--SGPRNLEIEFQWSNK 2150
>UNIPROTKB|Q5VRH9 [details] [associations]
symbol:PUB12 "U-box domain-containing protein 12"
species:39947 "Oryza sativa Japonica Group" [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0016567
"protein ubiquitination" evidence=IDA] InterPro:IPR000225
InterPro:IPR003613 InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564
PROSITE:PS50176 SMART:SM00185 SMART:SM00504 UniPathway:UPA00143
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 EMBL:AP008212
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151
HOGENOM:HOG000238412 EMBL:AP002842 EMBL:AK067611 EMBL:AK071080
RefSeq:NP_001056535.2 UniGene:Os.11259 ProteinModelPortal:Q5VRH9
EnsemblPlants:LOC_Os06g01304.1 GeneID:4339839 KEGG:osa:4339839
Gramene:Q5VRH9 eggNOG:NOG242845 OMA:KTGSPRN ProtClustDB:CLSN2695872
Uniprot:Q5VRH9
Length = 611
Score = 140 (54.3 bits), Expect = 0.00064, Sum P(2) = 0.00064
Identities = 68/298 (22%), Positives = 127/298 (42%)
Query: 517 GIPPLVQLLEAGSQKAREVAAHVLWILCCHSEDIRACVESAGAVPAFLWLLKSGGPKGQD 576
G+ L+ L +G+Q + AA + +L + + R C+ AGA+P + LL S P+ Q+
Sbjct: 324 GLVSLMNRLRSGNQDEQRAAAGEIRLLAKRNVNNRICIAEAGAIPLLVNLLSSSDPRTQE 383
Query: 577 ASAMALTKLI-----RAA--DSATINQLLALLLGDSPSSKAHVIKVLGHVLTMALQEDLV 629
+ AL L +A+ DS I +++ +L S ++ + L + + E+ V
Sbjct: 384 HAVTALLNLSIHENNKASIVDSHAIPKIVEVLKTGSMETRENAAATLFSL--SVVDENKV 441
Query: 630 QKGSAANKGLRSLVQVLNSSNEENQEYAASVLADLFSMRQDICGSLATDEIVNPCMRLLT 689
G+A + L+ +L + ++ AA+ + +L + + ++ +++ M L
Sbjct: 442 TIGAAG--AIPPLINLLCDGSPRGKKDAATAIFNLCIYQGNKVRAVKAGIVIH-LMNFLV 498
Query: 690 SNTQMVATQSARALGALSRPTKTKTTNKMSYIAEGD-VKPLIKLAKTSSI-DXXXXXXXX 747
T + ++ L L+ + K IA + + PL+++ KT S +
Sbjct: 499 DPTGGMIDEALSLLSILAGNPEGKIV-----IARSEPIPPLVEVIKTGSPRNRENAAAIL 553
Query: 748 XXXXXSDPDIAAEVLLEDVVSALTRVLAEGTSEGKKNASRALHQLLKHFPVGDVLKGN 805
+D + V AL + GT K+ AS L L H D LKGN
Sbjct: 554 WLLCSADTEQTLAAKAAGVEDALKELSETGTDRAKRKASSILE--LMHQANEDSLKGN 609
Score = 119 (46.9 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 46/195 (23%), Positives = 88/195 (45%)
Query: 12 QAHGFSSTSQPRESNGTSAMDDPESTMSTVAKFLEQLHANMSSPQERELITMRILTIAKA 71
+A+G + S A + + + + +L + Q +R+L AK
Sbjct: 296 EANGIELPKNKQNSRDKKAAKSSDYDHAGLVSLMNRLRSGNQDEQRAAAGEIRLL--AKR 353
Query: 72 KKEARLLIGSHAQAMPLFISILRSGTPLAKVNVAATLSVLCKDEDLRLKVLLGGCIPPLL 131
R+ I + A A+PL +++L S P + + L L E+ + ++ IP ++
Sbjct: 354 NVNNRICI-AEAGAIPLLVNLLSSSDPRTQEHAVTALLNLSIHENNKASIVDSHAIPKIV 412
Query: 132 SLLKSESTDTRKAAAEALYEVSSGGLSDDHVGMKIFV-TEGVVPTLWDQL---NPKNKQD 187
+LK+ S +TR+ AA L+ +S + D++ K+ + G +P L + L +P+ K+D
Sbjct: 413 EVLKTGSMETRENAAATLFSLS---VVDEN---KVTIGAAGAIPPLINLLCDGSPRGKKD 466
Query: 188 NVVQGFVTGALRNLC 202
A+ NLC
Sbjct: 467 AAT------AIFNLC 475
Score = 116 (45.9 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 29/101 (28%), Positives = 55/101 (54%)
Query: 494 AVQLIAILTEQVDDSKWAITAAGGIPPLVQLLEAGSQKAREVAAHVLWILCCHSEDIRAC 553
A+ L++IL + K I + IPPLV++++ GS + RE AA +LW+LC +
Sbjct: 508 ALSLLSILAGN-PEGKIVIARSEPIPPLVEVIKTGSPRNRENAAAILWLLCSADTEQTLA 566
Query: 554 VESAGAVPAFLWLLKSGGPKGQDASAMALTKLIRAADSATI 594
++AG A L ++G + + A ++ +L+ A+ ++
Sbjct: 567 AKAAGVEDALKELSETGTDRAK-RKASSILELMHQANEDSL 606
Score = 73 (30.8 bits), Expect = 2.8e-05, Sum P(2) = 2.8e-05
Identities = 29/97 (29%), Positives = 49/97 (50%)
Query: 879 DKAIEILSRLCGDQPAVLGDFLMARSSSIGALADRIMHSSSLEVRVGGAALL--ICAAKE 936
D+A+ +LS L G+ P G ++ARS I L + ++ + S R AA+L +C+A
Sbjct: 506 DEALSLLSILAGN-PE--GKIVIARSEPIPPLVE-VIKTGSPRNRENAAAILWLLCSADT 561
Query: 937 HKKQSMDALDLSGYLKPLIYALVDMMKQNSSCSSLDI 973
+ + A + LK L D K+ +S S L++
Sbjct: 562 EQTLAAKAAGVEDALKELSETGTDRAKRKAS-SILEL 597
Score = 38 (18.4 bits), Expect = 0.00064, Sum P(2) = 0.00064
Identities = 16/58 (27%), Positives = 24/58 (41%)
Query: 327 QGHATRALANIYGGMPALVVYLGEL--SQSPRLAAPVADIIGALAYALMVFEQKSGVD 382
+G R A++ + L L L S S + P+AD +GA L S +D
Sbjct: 16 RGPLRRPCADLSRRVRLLAPLLDHLPASSSSSSSTPLADALGAARDLLRKTRDGSKID 73
>TAIR|locus:2017719 [details] [associations]
symbol:AT1G23030 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0016567
"protein ubiquitination" evidence=IEA] [GO:0010200 "response to
chitin" evidence=IEP] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176
SMART:SM00185 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002684
GenomeReviews:CT485782_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0010200 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 EMBL:AF000657
HOGENOM:HOG000238412 HSSP:Q8VZ40 ProtClustDB:CLSN2681864
EMBL:BT002518 EMBL:AK221923 IPI:IPI00532693 PIR:D86364
RefSeq:NP_173716.1 UniGene:At.41572 UniGene:At.74178
ProteinModelPortal:Q8GUG9 SMR:Q8GUG9 PaxDb:Q8GUG9 PRIDE:Q8GUG9
EnsemblPlants:AT1G23030.1 GeneID:838911 KEGG:ath:AT1G23030
TAIR:At1g23030 eggNOG:KOG0167 InParanoid:Q8GUG9 OMA:IDCGNLT
PhylomeDB:Q8GUG9 Genevestigator:Q8GUG9 Uniprot:Q8GUG9
Length = 612
Score = 121 (47.7 bits), Expect = 7.1e-09, Sum P(2) = 7.1e-09
Identities = 48/189 (25%), Positives = 92/189 (48%)
Query: 38 MSTVAKFLEQLHANMSSPQERELITMRILTIAKAKKEARLLIGSHAQAMPLFISILRSGT 97
MS + +++L + S ++R I +++K + R+LI + A A+P+ +++L S
Sbjct: 330 MSVIRALVQRLSSR--STEDRRNAVSEIRSLSKRSTDNRILI-AEAGAIPVLVNLLTSED 386
Query: 98 PLAKVNVAATLSVLCKDEDLRLKVLLGGCIPPLLSLLKSESTDTRKAAAEALYEVSSGGL 157
+ N + L E+ + ++ G + ++ +L++ + + R+ AA L+ +S L
Sbjct: 387 VATQENAITCVLNLSIYENNKELIMFAGAVTSIVQVLRAGTMEARENAAATLFSLS---L 443
Query: 158 SDDHVGMKIFVT-EGVVPTLWDQLN---PKNKQDNVVQGFVTGALRNLCGDKDGYWRATL 213
+D++ KI + G +P L D L P+ K+D AL NLC RA +
Sbjct: 444 ADEN---KIIIGGSGAIPALVDLLENGTPRGKKDAAT------ALFNLCIYHGNKGRA-V 493
Query: 214 EAGGVDIIV 222
AG V +V
Sbjct: 494 RAGIVTALV 502
Score = 106 (42.4 bits), Expect = 7.1e-09, Sum P(2) = 7.1e-09
Identities = 29/96 (30%), Positives = 51/96 (53%)
Query: 494 AVQLIAILTEQVDDSKWAITAAGGIPPLVQLLEAGSQKAREVAAHVLWILCCHSEDIRAC 553
A+ ++++L D+K AI A +P L+ +L+ + RE AA +L LC +
Sbjct: 517 ALTILSVLANN-QDAKSAIVKANTLPALIGILQTDQTRNRENAAAILLSLCKRDTEKLIT 575
Query: 554 VESAGAVPAFLWLLKSGGPKGQDASAMALTKLIRAA 589
+ GAV + L K+G +G+ A++L +L+R A
Sbjct: 576 IGRLGAVVPLMDLSKNGTERGK-RKAISLLELLRKA 610
Score = 64 (27.6 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 32/110 (29%), Positives = 51/110 (46%)
Query: 1021 NNVTVMEAGALEALSDKLASYTSNPQAEFEDTEGIWISALFLAILFQDANIVLSPATMRI 1080
N + AG + AL L+ T + + E + I ++ LA QDA + A
Sbjct: 488 NKGRAVRAGIVTALVKMLSDSTRHRMVD----EALTILSV-LANN-QDAKSAIVKANT-- 539
Query: 1081 IPALALLLRSDEVIDRFFAAQAMASLVCSGSKGIILAIANSGAVAGLITL 1130
+PAL +L++D+ +R AA + SL C ++ I GAV L+ L
Sbjct: 540 LPALIGILQTDQTRNRENAAAILLSL-CKRDTEKLITIGRLGAVVPLMDL 588
>TAIR|locus:2154124 [details] [associations]
symbol:AT5G62560 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005871
"kinesin complex" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0019894 "kinesin binding"
evidence=IEA] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176 SMART:SM00185
SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 EMBL:AB015469 GO:GO:0000151 HOGENOM:HOG000239874
ProtClustDB:CLSN2719312 EMBL:AY128369 EMBL:BT000351 EMBL:AK227203
IPI:IPI00530696 RefSeq:NP_201062.1 UniGene:At.29043
ProteinModelPortal:Q0WUF6 SMR:Q0WUF6 PaxDb:Q0WUF6 PRIDE:Q0WUF6
EnsemblPlants:AT5G62560.1 GeneID:836376 KEGG:ath:AT5G62560
TAIR:At5g62560 eggNOG:NOG313122 InParanoid:Q0WUF6 OMA:FERACIQ
PhylomeDB:Q0WUF6 Genevestigator:Q0WUF6 Uniprot:Q0WUF6
Length = 559
Score = 126 (49.4 bits), Expect = 0.00070, P = 0.00070
Identities = 44/139 (31%), Positives = 69/139 (49%)
Query: 86 MPLFISILRSGTPLAKVNVAATLSVLCKDEDLRLKVLLGGCIPPLLSLLKS-ESTDTRKA 144
+PL I +L+SGT A+ +VA L L +++ ++ + + G + PLL L+S ES R+
Sbjct: 319 VPLLIDVLKSGTTEAQEHVAGALFSLALEDENKMVIGVLGAVEPLLHALRSSESERARQD 378
Query: 145 AAEALYEVSSGGLSDDHVGMKIFVTEGVVPTLWDQLNPKNKQDNVVQGFVTGALRNLCGD 204
AA ALY +S + + + V G VPTL + + ++ L NL
Sbjct: 379 AALALYHLSL--IPSNRTRL---VRAGAVPTLLSMVRSGDSTSRILL-----VLCNLAAC 428
Query: 205 KDGYWRATLEAGGVDIIVG 223
DG A L+ V I+VG
Sbjct: 429 PDGKG-AMLDGNAVAILVG 446
Score = 114 (45.2 bits), Expect = 7.4e-09, Sum P(2) = 7.4e-09
Identities = 53/185 (28%), Positives = 92/185 (49%)
Query: 491 QEY-AVQLIAILTEQVDDSKWAITAAGGIPPLVQLLEAG-SQKAREVAAHVLWILCCHSE 548
QE+ A L ++ E D++K I G + PL+ L + S++AR+ AA L+ L
Sbjct: 334 QEHVAGALFSLALE--DENKMVIGVLGAVEPLLHALRSSESERARQDAALALYHLSLIPS 391
Query: 549 DIRACVESAGAVPAFLWLLKSGGPKGQDASAMALTKLIRAADS--ATIN-QLLALLLG-- 603
+ R + AGAVP L +++SG + + L L D A ++ +A+L+G
Sbjct: 392 N-RTRLVRAGAVPTLLSMVRSGDSTSR--ILLVLCNLAACPDGKGAMLDGNAVAILVGKL 448
Query: 604 ------DSPSSKAHVIKVLGHVLTMALQEDLVQKGSAANKGLRS-LVQVLNSSNEENQEY 656
DS +++ + + VL LT+ Q +L +G A+ G L++V + NE +E
Sbjct: 449 REVGGGDSEAARENCVAVL---LTLC-QGNLRFRGLASEAGAEEVLMEVEENGNERVKEK 504
Query: 657 AASVL 661
A+ +L
Sbjct: 505 ASKIL 509
Score = 112 (44.5 bits), Expect = 7.4e-09, Sum P(2) = 7.4e-09
Identities = 44/178 (24%), Positives = 86/178 (48%)
Query: 1 MQMSKSPSPEPQAHGFSSTSQP-RESNGTSAMDDPESTMSTVAK-FLEQLHANMSSPQER 58
+ M S + + F+ P R + S+ D S MS + +L E+
Sbjct: 194 VSMFSSSTTSSSSGVFAGADSPFRNAMSFSSTDHSSSPMSPEEEEIFNKLRGTDIFDHEQ 253
Query: 59 ELITMRILTIAKAKKEARLLIGSHAQAMPLFISILRSGTPLAKVNVAATLSVLCKDEDLR 118
LI +R +T ++ ++ R+ + + + + S+L S L + N AA++ L ++ +
Sbjct: 254 GLILLRKMT--RSSEDLRVSLCTD-RILSFLRSLLVSRYNLVQTNAAASVVNLSLEKQNK 310
Query: 119 LKVLLGGCIPPLLSLLKSESTDTRKAAAEALYEVSSGGLSDDHVGMKIFVTEGVVPTL 176
+K++ G +P L+ +LKS +T+ ++ A AL+ ++ L D++ M I V V P L
Sbjct: 311 VKIVRSGFVPLLIDVLKSGTTEAQEHVAGALFSLA---LEDENK-MVIGVLGAVEPLL 364
>TAIR|locus:2082682 [details] [associations]
symbol:PUB14 "plant U-box 14" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA;IDA]
[GO:0005871 "kinesin complex" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=IEA;ISS] [GO:0019894 "kinesin binding"
evidence=IEA] [GO:0070696 "transmembrane receptor protein
serine/threonine kinase binding" evidence=IPI] [GO:0005515 "protein
binding" evidence=IPI] [GO:0046777 "protein autophosphorylation"
evidence=RCA] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176
SMART:SM00185 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002686
GenomeReviews:BA000014_GR SUPFAM:SSF48371 EMBL:AL049655
Gene3D:1.25.10.10 InterPro:IPR011989 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 HOGENOM:HOG000238412
eggNOG:NOG242845 OMA:KTGSPRN EMBL:AY065279 EMBL:AY096530
IPI:IPI00539579 PIR:T06735 RefSeq:NP_191045.2 UniGene:At.28098
PDB:1T1H PDBsum:1T1H ProteinModelPortal:Q8VZ40 SMR:Q8VZ40
IntAct:Q8VZ40 STRING:Q8VZ40 PaxDb:Q8VZ40 PRIDE:Q8VZ40
EnsemblPlants:AT3G54850.1 GeneID:824650 KEGG:ath:AT3G54850
TAIR:At3g54850 InParanoid:Q8VZ40 PhylomeDB:Q8VZ40
ProtClustDB:CLSN2690608 EvolutionaryTrace:Q8VZ40
Genevestigator:Q8VZ40 GermOnline:AT3G54850 Uniprot:Q8VZ40
Length = 632
Score = 142 (55.0 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 51/179 (28%), Positives = 91/179 (50%)
Query: 491 QEYAVQLIAILTEQVDD-SKWAITAAGGIPPLVQLLEAGSQKAREVAAHVLWILCCHSED 549
QE++V A+L +++ +K AI AG I +V++L+ GS +ARE AA L+ L E+
Sbjct: 404 QEHSVT--ALLNLSINEGNKGAIVDAGAITDIVEVLKNGSMEARENAAATLFSLSVIDEN 461
Query: 550 IRACVESAGAVPAFLWLLKSGGPKGQDASAMALTKLI-------RAADSATINQLLALLL 602
+ + +AGA+ A + LL+ G +G+ +A A+ L RA ++ L LL
Sbjct: 462 -KVAIGAAGAIQALISLLEEGTRRGKKDAATAIFNLCIYQGNKSRAVKGGIVDPLTRLLK 520
Query: 603 GDSPSSKAHVIKVLGHVLTMALQEDLVQKGSAANKGLRSLVQVLNSSNEENQEYAASVL 661
+ +L + T QE + A + + LV+++ + + N+E AA++L
Sbjct: 521 DAGGGMVDEALAILAILSTN--QEG--KTAIAEAESIPVLVEIIRTGSPRNRENAAAIL 575
Score = 138 (53.6 bits), Expect = 4.2e-05, P = 4.2e-05
Identities = 57/225 (25%), Positives = 102/225 (45%)
Query: 521 LVQLLEAGSQKAREVAAHVLWILCCHSEDIRACVESAGAVPAFLWLLKSGGPKGQDASAM 580
L++ L G+ + + AA L +L + D R C+ AGA+P + LL S P+ Q+ S
Sbjct: 350 LLEKLANGTTEQQRAAAGELRLLAKRNVDNRVCIAEAGAIPLLVELLSSPDPRTQEHSVT 409
Query: 581 ALTKLI-----RAA--DSATINQLLALLLGDSPSSKAHVIKVLGHVLTMALQEDLVQKGS 633
AL L + A D+ I ++ +L S ++ + L + + E+ V G+
Sbjct: 410 ALLNLSINEGNKGAIVDAGAITDIVEVLKNGSMEARENAAATLFSL--SVIDENKVAIGA 467
Query: 634 AANKGLRSLVQVLNSSNEENQEYAASVLADLFSMRQDICGSLATDEIVNPCMRLLTSNTQ 693
A +++L+ +L ++ AA+ + +L + Q IV+P RLL
Sbjct: 468 AG--AIQALISLLEEGTRRGKKDAATAIFNL-CIYQGNKSRAVKGGIVDPLTRLLKDAGG 524
Query: 694 MVATQSARALGALSRPTKTKTTNKMSYIAEGDVKP-LIKLAKTSS 737
+ ++ L LS + KT IAE + P L+++ +T S
Sbjct: 525 GMVDEALAILAILSTNQEGKTA-----IAEAESIPVLVEIIRTGS 564
Score = 116 (45.9 bits), Expect = 2.1e-08, Sum P(2) = 2.1e-08
Identities = 54/211 (25%), Positives = 93/211 (44%)
Query: 387 DARQIEDILVMLLKPHDNKLVQERVLEAMASLYGNIFLSQ---WVSHAEAKKVLIGLITM 443
DA I DI V +LK N ++ R A A+L+ + + + A A + LI L+
Sbjct: 426 DAGAITDI-VEVLK---NGSMEARE-NAAATLFSLSVIDENKVAIGAAGAIQALISLLEE 480
Query: 444 ATADVREYLILSLTKLCRREVGIWEAIGKRXXXXXXXXXXXXXXXXHQEYAVQLIAILTE 503
T ++ ++ LC + A+ K + A+ ++AIL+
Sbjct: 481 GTRRGKKDAATAIFNLCIYQGNKSRAV-KGGIVDPLTRLLKDAGGGMVDEALAILAILST 539
Query: 504 QVDDSKWAITAAGGIPPLVQLLEAGSQKAREVAAHVLWILCCHSEDIRACVESAGAVPAF 563
+ K AI A IP LV+++ GS + RE AA +LW LC + + GA A
Sbjct: 540 N-QEGKTAIAEAESIPVLVEIIRTGSPRNRENAAAILWYLCIGNIERLNVAREVGADVAL 598
Query: 564 LWLLKSGGPKGQDASAMALTKLIRAADSATI 594
L ++G + + +A +L +LI+ + +
Sbjct: 599 KELTENGTDRAKRKAA-SLLELIQQTEGVAV 628
Score = 107 (42.7 bits), Expect = 2.1e-08, Sum P(2) = 2.1e-08
Identities = 42/144 (29%), Positives = 72/144 (50%)
Query: 11 PQAHGFSSTSQPRESNGTSAMDDPESTMSTVAKFLEQLHANMSSPQERELI-TMRILTIA 69
PQ G T++ G S+ D + T V LE+L AN ++ Q+R +R+L A
Sbjct: 323 PQNQGSCRTTKI----GGSSSSDCDRTF--VLSLLEKL-ANGTTEQQRAAAGELRLL--A 373
Query: 70 KAKKEARLLIGSHAQAMPLFISILRSGTPLAKVNVAATLSVLCKDEDLRLKVLLGGCIPP 129
K + R+ I + A A+PL + +L S P + + L L +E + ++ G I
Sbjct: 374 KRNVDNRVCI-AEAGAIPLLVELLSSPDPRTQEHSVTALLNLSINEGNKGAIVDAGAITD 432
Query: 130 LLSLLKSESTDTRKAAAEALYEVS 153
++ +LK+ S + R+ AA L+ +S
Sbjct: 433 IVEVLKNGSMEARENAAATLFSLS 456
>TAIR|locus:2158252 [details] [associations]
symbol:AT5G67340 species:3702 "Arabidopsis thaliana"
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0000165
"MAPK cascade" evidence=RCA] [GO:0006499 "N-terminal protein
myristoylation" evidence=RCA] [GO:0006612 "protein targeting to
membrane" evidence=RCA] [GO:0006865 "amino acid transport"
evidence=RCA] [GO:0006944 "cellular membrane fusion" evidence=RCA]
[GO:0006984 "ER-nucleus signaling pathway" evidence=RCA]
[GO:0007154 "cell communication" evidence=RCA] [GO:0009409
"response to cold" evidence=RCA] [GO:0009414 "response to water
deprivation" evidence=RCA] [GO:0009611 "response to wounding"
evidence=RCA] [GO:0009627 "systemic acquired resistance"
evidence=RCA] [GO:0009697 "salicylic acid biosynthetic process"
evidence=RCA] [GO:0009738 "abscisic acid mediated signaling
pathway" evidence=RCA] [GO:0009862 "systemic acquired resistance,
salicylic acid mediated signaling pathway" evidence=RCA]
[GO:0009867 "jasmonic acid mediated signaling pathway"
evidence=RCA] [GO:0010363 "regulation of plant-type hypersensitive
response" evidence=RCA] [GO:0030968 "endoplasmic reticulum unfolded
protein response" evidence=RCA] [GO:0031348 "negative regulation of
defense response" evidence=RCA] [GO:0034976 "response to
endoplasmic reticulum stress" evidence=RCA] [GO:0042538
"hyperosmotic salinity response" evidence=RCA] [GO:0043069
"negative regulation of programmed cell death" evidence=RCA]
[GO:0050832 "defense response to fungus" evidence=RCA]
InterPro:IPR000225 InterPro:IPR003613 InterPro:IPR016024
Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176 SMART:SM00185
SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 EMBL:AB007645 HOGENOM:HOG000238412
HSSP:Q8VZ40 EMBL:BT015818 EMBL:BT020206 EMBL:AK229487
IPI:IPI00537014 RefSeq:NP_201535.3 UniGene:At.28815
ProteinModelPortal:Q5XEZ8 SMR:Q5XEZ8 STRING:Q5XEZ8 PaxDb:Q5XEZ8
PRIDE:Q5XEZ8 EnsemblPlants:AT5G67340.1 GeneID:836869
KEGG:ath:AT5G67340 TAIR:At5g67340 eggNOG:NOG269447
InParanoid:Q5XEZ8 OMA:LASWCET PhylomeDB:Q5XEZ8
ProtClustDB:CLSN2681130 Genevestigator:Q5XEZ8 Uniprot:Q5XEZ8
Length = 707
Score = 128 (50.1 bits), Expect = 6.6e-08, Sum P(2) = 6.6e-08
Identities = 37/97 (38%), Positives = 51/97 (52%)
Query: 492 EYAVQLIAILTEQVDDSKWAITAAGGIPPLVQLLEAGSQKAREVAAHVLWILCCHSEDIR 551
E AV ++A L V + K AI GGIP LV+++E GS + +E A L LC HS
Sbjct: 604 EKAVVVLANLAT-VREGKIAIGEEGGIPVLVEVVELGSARGKENATAALLQLCTHSPKFC 662
Query: 552 ACVESAGAVPAFLWLLKSGGPKGQDASAMALTKLIRA 588
V G +P + L KSG +G++ A L K +A
Sbjct: 663 NNVIREGVIPPLVALTKSGTARGKE-KAQNLLKYFKA 698
Score = 91 (37.1 bits), Expect = 6.6e-08, Sum P(2) = 6.6e-08
Identities = 32/120 (26%), Positives = 63/120 (52%)
Query: 36 STMST-VAKFLEQLHANMSSPQERELITMRILTIAKAKKEARLLIGSHAQAMPLFISILR 94
S++ T V K ++ L ++ S +RE T RI +A+ + R++I + +A+P +S+L
Sbjct: 417 SSIETEVKKLIDDLKSS-SLDTQREA-TARIRILARNSTDNRIVI-ARCEAIPSLVSLLY 473
Query: 95 SGTPLAKVNVAATLSVLCKDEDLRLKVLLGGCIPPLLSLLKSESTDTRKA-AAEALYEVS 153
S + + L L +++ + + G I PL+ +LK+ + KA +A L+ +S
Sbjct: 474 STDERIQADAVTCLLNLSINDNNKSLIAESGAIVPLIHVLKTGYLEEAKANSAATLFSLS 533
Score = 59 (25.8 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 41/179 (22%), Positives = 79/179 (44%)
Query: 90 ISILRSGTPLAKVNVAATLSVLCKDE-DLRLKVLLGGCIPPLLSLLKSESTDTRKAAAEA 148
I L+S + + A + +L ++ D R+ + IP L+SLL S TD R A+A
Sbjct: 427 IDDLKSSSLDTQREATARIRILARNSTDNRIVIARCEAIPSLVSLLYS--TDER-IQADA 483
Query: 149 LYEVSSGGLSDDHVGMKIFVTEGVVPTLWDQLNPKNKQDNVVQGFVTGALRNLCGDKDGY 208
+ + + ++D++ + I + +VP + L ++ T L +L ++ Y
Sbjct: 484 VTCLLNLSINDNNKSL-IAESGAIVPLI-HVLKTGYLEEAKANSAAT--LFSLSVIEE-Y 538
Query: 209 WRATLEAGGVDIIVGXXXXXXXXXXXXXXXXXXRLMLAFGDSIPTVIDSGAVKALVQLV 267
EAG ++ +V L + ++ VI++GAV+ LV+L+
Sbjct: 539 KTEIGEAGAIEPLVDLLGSGSLSGKKDAATALFNLSIHH-ENKTKVIEAGAVRYLVELM 596
>TAIR|locus:2096687 [details] [associations]
symbol:AT3G01400 species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000225
InterPro:IPR016024 Pfam:PF00514 PROSITE:PS50176 SMART:SM00185
EMBL:CP002686 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
EMBL:AC010870 ProtClustDB:CLSN2686276 IPI:IPI00535994
RefSeq:NP_566136.1 UniGene:At.20281 ProteinModelPortal:Q9SGH8
SMR:Q9SGH8 PRIDE:Q9SGH8 EnsemblPlants:AT3G01400.1 GeneID:821320
KEGG:ath:AT3G01400 TAIR:At3g01400 InParanoid:Q9SGH8 OMA:VAELECP
PhylomeDB:Q9SGH8 Genevestigator:Q9SGH8 Uniprot:Q9SGH8
Length = 355
Score = 158 (60.7 bits), Expect = 1.0e-07, P = 1.0e-07
Identities = 66/232 (28%), Positives = 112/232 (48%)
Query: 491 QEYAVQLIAILTEQVDDSKWAITAAGGIPPLVQLLEAGSQKAREVAAHVLWILCCHSEDI 550
QEY V I L+ D++K +I ++G I PLV+ L+ G+ A+E AA L L E+
Sbjct: 122 QEYGVTAILNLS-LCDENKESIASSGAIKPLVRALKMGTPTAKENAACALLRLS-QIEEN 179
Query: 551 RACVESAGAVPAFLWLLKSGGPKGQDASAMALTKL-------IRAADSATINQLLALL-- 601
+ + +GA+P + LL++GG + + ++ AL L IRA S + L+ L+
Sbjct: 180 KVAIGRSGAIPLLVNLLETGGFRAKKDASTALYSLCSAKENKIRAVQSGIMKPLVELMAD 239
Query: 602 LGDSPSSK-AHVIKVLGHVLTMALQEDLVQKGSAANKGLRSLVQVLNSSNEENQEYAASV 660
G + K A V+ +L V + +V++G G+ LV+++ + +E A S+
Sbjct: 240 FGSNMVDKSAFVMSLLMSVPES--KPAIVEEG-----GVPVLVEIVEVGTQRQKEMAVSI 292
Query: 661 LADLFSMRQDICGSLATDEIVNPCMRLLTSNTQMVATQSARALGALSRPTKT 712
L L +A + + P + L + T A Q A AL L R ++
Sbjct: 293 LLQLCEESVVYRTMVAREGAIPPLVALSQAGTSR-AKQKAEALIELLRQPRS 343
Score = 132 (51.5 bits), Expect = 7.3e-05, P = 7.3e-05
Identities = 64/251 (25%), Positives = 111/251 (44%)
Query: 428 VSHAEAKKVLIGLITMATADVREY---LILSLTKLCRREVGIWEAIGKRXXXXXXXXXXX 484
++ A A K LI LI+ + ++EY IL+L+ LC E+I
Sbjct: 101 IAKAGAIKPLISLISSSDLQLQEYGVTAILNLS-LCDENK---ESIASSGAIKPLVRALK 156
Query: 485 XXXXXHQEYAVQLIAILTEQVDDSKWAITAAGGIPPLVQLLEAGSQKAREVAAHVLWILC 544
+E A + L+ Q++++K AI +G IP LV LLE G +A++ A+ L+ LC
Sbjct: 157 MGTPTAKENAACALLRLS-QIEENKVAIGRSGAIPLLVNLLETGGFRAKKDASTALYSLC 215
Query: 545 CHSED-IRACVESAGAVPAFLWLLKSGGPKGQDASAMALTKLIRAADS--ATINQLLALL 601
E+ IRA V+S G + + L+ G D SA ++ L+ +S A + + +
Sbjct: 216 SAKENKIRA-VQS-GIMKPLVELMADFGSNMVDKSAFVMSLLMSVPESKPAIVEEGGVPV 273
Query: 602 LGDSPSSKAHVIKVLG-HVLTMALQEDLVQKGSAANKGLRSLVQVLNSSNEENQEYAASV 660
L + K + +L +E +V + A +G + L+ + + A
Sbjct: 274 LVEIVEVGTQRQKEMAVSILLQLCEESVVYRTMVAREGAIPPLVALSQAGTSRAKQKAEA 333
Query: 661 LADLFSMRQDI 671
L +L + I
Sbjct: 334 LIELLRQPRSI 344
Score = 126 (49.4 bits), Expect = 0.00033, P = 0.00033
Identities = 58/224 (25%), Positives = 100/224 (44%)
Query: 49 HANMS-SPQERELITMRILTIAKAKKEARLLIGSHAQAMPLFISILRSGTPLAKVNVAAT 107
H + S S E++ M I ++K K E R+ I PL I S L + V A
Sbjct: 70 HLDSSYSIDEQKQAAMEIRLLSKNKPENRIKIAKAGAIKPLISLISSSDLQLQEYGVTAI 129
Query: 108 LSV-LCKDEDLRLKVLLGGCIPPLLSLLKSESTDTRKAAAEALYEVSSGGLSDDHVGMKI 166
L++ LC DE+ + + G I PL+ LK + ++ AA AL +S + ++ V +
Sbjct: 130 LNLSLC-DEN-KESIASSGAIKPLVRALKMGTPTAKENAACALLRLSQ--IEENKVAIG- 184
Query: 167 FVTEGVVPTLWDQLNP---KNKQDNVVQGFVTGALRNLCGDKDGYWRATLEAGGVDIIVG 223
G +P L + L + K+D + AL +LC K+ RA +++G + +V
Sbjct: 185 --RSGAIPLLVNLLETGGFRAKKD------ASTALYSLCSAKENKIRA-VQSGIMKPLVE 235
Query: 224 XXXXXXXXXXXXXXXXXXRLMLAFGDSIPTVIDSGAVKALVQLV 267
L+++ +S P +++ G V LV++V
Sbjct: 236 LMADFGSNMVDKSAFVMS-LLMSVPESKPAIVEEGGVPVLVEIV 278
>TAIR|locus:2102455 [details] [associations]
symbol:AT3G54790 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005871
"kinesin complex" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0019894 "kinesin binding"
evidence=IEA] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176
SMART:SM00185 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002686
GenomeReviews:BA000014_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 EMBL:AL138650 HOGENOM:HOG000238412
HSSP:Q8VZ40 EMBL:AK118613 IPI:IPI00538000 PIR:T47638
RefSeq:NP_191039.2 UniGene:At.1218 UniGene:At.48768
ProteinModelPortal:Q8GWV5 SMR:Q8GWV5 PaxDb:Q8GWV5 PRIDE:Q8GWV5
EnsemblPlants:AT3G54790.1 GeneID:824644 KEGG:ath:AT3G54790
TAIR:At3g54790 eggNOG:NOG259040 InParanoid:Q8GWV5 OMA:LSHFRNQ
PhylomeDB:Q8GWV5 ProtClustDB:CLSN2680413 Genevestigator:Q8GWV5
Uniprot:Q8GWV5
Length = 760
Score = 129 (50.5 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 34/98 (34%), Positives = 53/98 (54%)
Query: 494 AVQLIAILTEQVDDSKWAITAAGGIPPLVQLLEAGSQKAREVAAHVLWILCCHSEDIRAC 553
AV L+A L+ V + + AI GGIP LV+ ++ GSQ+ +E AA VL LC +S
Sbjct: 657 AVALLANLSA-VGEGRQAIVREGGIPLLVETVDLGSQRGKENAASVLLQLCLNSPKFCTL 715
Query: 554 VESAGAVPAFLWLLKSGGPKGQDASAMALTKLIRAADS 591
V GA+P + L +SG + ++ + L+ D+
Sbjct: 716 VLQEGAIPPLVALSQSGTQRAKEKAQQLLSHFRNQRDA 753
Score = 88 (36.0 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 42/181 (23%), Positives = 77/181 (42%)
Query: 2 QMSKSPSPEPQAHGFSSTSQPRESNGT---SAMD-DPESTMST--VAKFLEQLHANMSSP 55
Q S SP+ ++ + + T S D D TM+T K +E L + +
Sbjct: 429 QSSSEMSPKKNLESSNNVNHEHSAAKTYECSVHDLDDSGTMTTSHTIKLVEDLKSGSNKV 488
Query: 56 QERELITMRILTIAKAKKEARLLIGSHAQAMPLFISILRSGTPLAKVNVAATLSVLCKDE 115
+ +R LTI E R+ IG PL +S+L S L + + L L E
Sbjct: 489 KTAAAAEIRHLTINSI--ENRVHIGRCGAITPL-LSLLYSEEKLTQEHAVTALLNLSISE 545
Query: 116 DLRLKVLLGGCIPPLLSLLKSESTDTRKAAAEALYEVSSGGLSDDHVGMKIFVTEGVVPT 175
+ ++ G I PL+ +L + + ++ +A +L+ +S ++ + +G + +V
Sbjct: 546 LNKAMIVEVGAIEPLVHVLNTGNDRAKENSAASLFSLSVLQVNRERIGQSNAAIQALVNL 605
Query: 176 L 176
L
Sbjct: 606 L 606
Score = 83 (34.3 bits), Expect = 4.1e-07, Sum P(2) = 4.1e-07
Identities = 44/177 (24%), Positives = 79/177 (44%)
Query: 93 LRSGTPLAKVNVAATLSVLCKDEDLRLKVLLGGC--IPPLLSLLKSESTDTRKAAAEALY 150
L+SG+ K AA + L + + +V +G C I PLLSLL SE T++ A AL
Sbjct: 481 LKSGSNKVKTAAAAEIRHLTINS-IENRVHIGRCGAITPLLSLLYSEEKLTQEHAVTALL 539
Query: 151 EVSSGGLSDDHVGMKIFVTEGVVPTLWDQLNPKNKQDNVVQGFVTGALRNLCGDKDGYWR 210
+S L+ + +++ E +V L + N + K+++ F L+ + ++ G
Sbjct: 540 NLSISELNKAMI-VEVGAIEPLVHVL-NTGNDRAKENSAASLFSLSVLQ-VNRERIGQSN 596
Query: 211 ATLEAGGVDIIVGXXXXXXXXXXXXXXXXXXRLMLAFGDSIPTVIDSGAVKALVQLV 267
A ++A +V L + D+ ++ + AVK LV+L+
Sbjct: 597 AAIQA-----LVNLLGKGTFRGKKDAASALFNLSITH-DNKARIVQAKAVKYLVELL 647
>TAIR|locus:2045334 [details] [associations]
symbol:PUB4 "plant U-box 4" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005871 "kinesin complex"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0019894 "kinesin binding" evidence=IEA] InterPro:IPR000225
InterPro:IPR003613 InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176
SMART:SM00185 SMART:SM00504 EMBL:CP002685 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 IPI:IPI00532127
RefSeq:NP_179895.6 UniGene:At.39339 ProteinModelPortal:F4ILG6
SMR:F4ILG6 PRIDE:F4ILG6 EnsemblPlants:AT2G23140.1 GeneID:816846
KEGG:ath:AT2G23140 OMA:WRRPSER Uniprot:F4ILG6
Length = 829
Score = 170 (64.9 bits), Expect = 5.1e-07, Sum P(2) = 5.1e-07
Identities = 74/284 (26%), Positives = 126/284 (44%)
Query: 428 VSHAEAK-KVLIGLITMATADVREYLILSLTKLCRREVGIWEAIGKRXXXXXXXXXXXXX 486
+S E + K L+ + ++ D + L L + + IG
Sbjct: 539 LSEVETQVKKLVEELKSSSLDTQRQATAELRLLAKHNMDNRIVIGNSGAIVLLVELLYST 598
Query: 487 XXXHQEYAVQLIAILTEQVDDSKWAITAAGGIPPLVQLLEAGSQKAREVAAHVLWILCCH 546
QE AV + L+ D++K AI AG I PL+ +LE GS +A+E +A L+ L
Sbjct: 599 DSATQENAVTALLNLSIN-DNNKKAIADAGAIEPLIHVLENGSSEAKENSAATLFSLSVI 657
Query: 547 SEDIRACVESAGAVPAFLWLLKSGGPKGQDASAMALTKL-IRAADSATINQLLAL----- 600
E+ + + +GA+ + LL +G P+G+ +A AL L I + A I Q A+
Sbjct: 658 EEN-KIKIGQSGAIGPLVDLLGNGTPRGKKDAATALFNLSIHQENKAMIVQSGAVRYLID 716
Query: 601 LLGDSPSSKAHVIKVLGHVLTMALQEDLV-QKGSAANKGLRSLVQVLNSSNEENQEYAAS 659
L+ + + VL ++ T+ + + Q+G G+ LV+V+ + +E AA+
Sbjct: 717 LMDPAAGMVDKAVAVLANLATIPEGRNAIGQEG-----GIPLLVEVVELGSARGKENAAA 771
Query: 660 VLADLFSMRQDICGSLATDEIVNPCMRLLTSNTQMVATQSARAL 703
L L + C + + V P + L S T A + A+AL
Sbjct: 772 ALLQLSTNSGRFCNMVLQEGAVPPLVALSQSGTPR-AREKAQAL 814
Score = 140 (54.3 bits), Expect = 0.00070, Sum P(2) = 0.00070
Identities = 63/226 (27%), Positives = 98/226 (43%)
Query: 41 VAKFLEQLHANMSSPQERELITMRILTIAKAKKEARLLIGSHAQAMPLFISILRSGTPLA 100
+ +E L++ S+ QE + + L+I K+A I PL I +L +G+ A
Sbjct: 588 IVLLVELLYSTDSATQENAVTALLNLSINDNNKKA---IADAGAIEPL-IHVLENGSSEA 643
Query: 101 KVNVAATLSVLCKDEDLRLKVLLGGCIPPLLSLLKSESTDTRKAAAEALYEVSSGGLSDD 160
K N AATL L E+ ++K+ G I PL+ LL + + +K AA AL+ +S + +
Sbjct: 644 KENSAATLFSLSVIEENKIKIGQSGAIGPLVDLLGNGTPRGKKDAATALFNLS---IHQE 700
Query: 161 HVGMKIFVTEGVVPTLWDQLNPKNKQDNVVQGFVTGALRNLCGDKDGYWRATLEAGGVDI 220
+ M V G V L D ++P +V V L NL +G A + GG+ +
Sbjct: 701 NKAM--IVQSGAVRYLIDLMDPAA---GMVDKAVA-VLANLATIPEGR-NAIGQEGGIPL 753
Query: 221 IVGXXXXXXXXXXXXXXXXXXRLMLAFGDSIPTVIDSGAVKALVQL 266
+V +L G V+ GAV LV L
Sbjct: 754 LVEVVELGSARGKENAAAALLQLSTNSGRFCNMVLQEGAVPPLVAL 799
Score = 111 (44.1 bits), Expect = 2.8e-07, Sum P(2) = 2.8e-07
Identities = 34/94 (36%), Positives = 50/94 (53%)
Query: 494 AVQLIAILTEQVDDSKWAITAAGGIPPLVQLLEAGSQKAREVAAHVLWILCCHSEDIRAC 553
AV ++A L + + + AI GGIP LV+++E GS + +E AA L L +S
Sbjct: 728 AVAVLANLAT-IPEGRNAIGQEGGIPLLVEVVELGSARGKENAAAALLQLSTNSGRFCNM 786
Query: 554 VESAGAVPAFLWLLKSGGPKGQDASAMALTKLIR 587
V GAVP + L +SG P+ ++ A AL R
Sbjct: 787 VLQEGAVPPLVALSQSGTPRARE-KAQALLSYFR 819
Score = 104 (41.7 bits), Expect = 2.8e-07, Sum P(2) = 2.8e-07
Identities = 38/158 (24%), Positives = 78/158 (49%)
Query: 33 DPESTMSTVAKFLEQLHANMSSPQERELITMRILTIAKAKKEARLLIGSHAQAMPLFISI 92
D + V K +E+L ++ Q + +R+L AK + R++IG+ A+ L + +
Sbjct: 538 DLSEVETQVKKLVEELKSSSLDTQRQATAELRLL--AKHNMDNRIVIGNSG-AIVLLVEL 594
Query: 93 LRSGTPLAKVNVAATLSVLCKDEDLRLKVLLGGCIPPLLSLLKSESTDTRKAAAEALYEV 152
L S + N L L +++ + + G I PL+ +L++ S++ ++ +A L+ +
Sbjct: 595 LYSTDSATQENAVTALLNLSINDNNKKAIADAGAIEPLIHVLENGSSEAKENSAATLFSL 654
Query: 153 SSGGLSDDHVGMKIFVTEGVVPTLWDQLN---PKNKQD 187
S + ++ + KI + G + L D L P+ K+D
Sbjct: 655 SV--IEENKI--KIGQS-GAIGPLVDLLGNGTPRGKKD 687
Score = 41 (19.5 bits), Expect = 5.1e-07, Sum P(2) = 5.1e-07
Identities = 9/25 (36%), Positives = 14/25 (56%)
Query: 862 SIEPLVCCLAEGPPPLQDKAIEILS 886
++ PLV G P ++KA +LS
Sbjct: 792 AVPPLVALSQSGTPRAREKAQALLS 816
>TAIR|locus:2075140 [details] [associations]
symbol:PUB13 "plant U-box 13" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0016567
"protein ubiquitination" evidence=IEA;IDA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0070696 "transmembrane receptor protein serine/threonine kinase
binding" evidence=IPI] [GO:0042742 "defense response to bacterium"
evidence=IGI] [GO:0000902 "cell morphogenesis" evidence=RCA]
[GO:0006487 "protein N-linked glycosylation" evidence=RCA]
[GO:0006499 "N-terminal protein myristoylation" evidence=RCA]
[GO:0016049 "cell growth" evidence=RCA] [GO:0032880 "regulation of
protein localization" evidence=RCA] [GO:0046777 "protein
autophosphorylation" evidence=RCA] [GO:0048193 "Golgi vesicle
transport" evidence=RCA] [GO:0048767 "root hair elongation"
evidence=RCA] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR000225 InterPro:IPR003613 InterPro:IPR016024
Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176 SMART:SM00185
SMART:SM00504 UniPathway:UPA00143 GO:GO:0005829 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0042742 EMBL:AL133314
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151
HOGENOM:HOG000238412 HSSP:Q8VZ40 EMBL:AY042791 EMBL:AY128813
IPI:IPI00531350 PIR:T45588 RefSeq:NP_190235.1 UniGene:At.23070
ProteinModelPortal:Q9SNC6 SMR:Q9SNC6 STRING:Q9SNC6 PaxDb:Q9SNC6
PRIDE:Q9SNC6 EnsemblPlants:AT3G46510.1 GeneID:823804
KEGG:ath:AT3G46510 TAIR:At3g46510 eggNOG:NOG269633
InParanoid:Q9SNC6 OMA:DSRIQEH PhylomeDB:Q9SNC6
ProtClustDB:CLSN2684834 Genevestigator:Q9SNC6 Uniprot:Q9SNC6
Length = 660
Score = 152 (58.6 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 67/290 (23%), Positives = 125/290 (43%)
Query: 385 PFDARQIEDILVMLL--KPHDNKLVQERVLEAMASLYGNIFLSQWVSHAEAKKVLIGLIT 442
P +A +IED++ L P D + + +A + ++ ++ A A +L+GL++
Sbjct: 348 PAEANKIEDLMWRLAYGNPEDQRSAAGEI-RLLAKRNADNRVA--IAEAGAIPLLVGLLS 404
Query: 443 MATADVREYLILSLTKL--CRREVGIWEAIGKRXXXXXXXXXXXXXXXXHQEYAVQLIAI 500
+ ++E+ + +L L C G + G + A L ++
Sbjct: 405 TPDSRIQEHSVTALLNLSICENNKGAIVSAG--AIPGIVQVLKKGSMEARENAAATLFSL 462
Query: 501 LTEQVDDSKWAITAAGGIPPLVQLLEAGSQKAREVAAHVLWILCCHSEDIRACVESAGAV 560
+D++K I A G IPPLV LL G+Q+ ++ AA L+ LC + + + AG +
Sbjct: 463 SV--IDENKVTIGALGAIPPLVVLLNEGTQRGKKDAATALFNLCIYQGNKGKAIR-AGVI 519
Query: 561 PAFLWLLKSGGPKGQDASAMALTKLIRA--------ADSATINQLLALLLGDSPSSKAHV 612
P LL G G A+A+ ++ + S + L+ + SP ++ +
Sbjct: 520 PTLTRLLTEPG-SGMVDEALAILAILSSHPEGKAIIGSSDAVPSLVEFIRTGSPRNRENA 578
Query: 613 IKVLGHVLTMALQEDLVQKGSAANKGLRS-LVQVLNSSNEENQEYAASVL 661
VL H+ + Q LV+ A GL L+ + + + + AA +L
Sbjct: 579 AAVLVHLCSGDPQH-LVE---AQKLGLMGPLIDLAGNGTDRGKRKAAQLL 624
Score = 112 (44.5 bits), Expect = 8.2e-07, Sum P(2) = 8.2e-07
Identities = 42/124 (33%), Positives = 64/124 (51%)
Query: 56 QERELITMRILTIAKAKKEARLLIGSHAQAMPLFISILRSGTPLAKVNVAATL-SVLCKD 114
QE + + L+I + K A + G A+P + +L+ G+ A+ N AATL S+ D
Sbjct: 411 QEHSVTALLNLSICENNKGAIVSAG----AIPGIVQVLKKGSMEARENAAATLFSLSVID 466
Query: 115 EDLRLKVLLG--GCIPPLLSLLKSESTDTRKAAAEALYEVSSGGLSDDHVGMKIFVTEGV 172
E+ KV +G G IPPL+ LL + +K AA AL+ + + + G I GV
Sbjct: 467 EN---KVTIGALGAIPPLVVLLNEGTQRGKKDAATALFNLC---IYQGNKGKAI--RAGV 518
Query: 173 VPTL 176
+PTL
Sbjct: 519 IPTL 522
Score = 101 (40.6 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 42/154 (27%), Positives = 80/154 (51%)
Query: 54 SPQERELITMRILTIAKAKKEARLLIGSHAQAMPLFISILRSGTPLAKV---NVAATLSV 110
+P+++ I +AK + R+ I + A A+PL + +L TP +++ +V A L++
Sbjct: 365 NPEDQRSAAGEIRLLAKRNADNRVAI-AEAGAIPLLVGLL--STPDSRIQEHSVTALLNL 421
Query: 111 -LCKDEDLRLKVLLGGCIPPLLSLLKSESTDTRKAAAEALYEVSSGGLSDDHVGMKIFVT 169
+C E+ + ++ G IP ++ +LK S + R+ AA L+ +S + D++ K+ +
Sbjct: 422 SIC--ENNKGAIVSAGAIPGIVQVLKKGSMEARENAAATLFSLS---VIDEN---KVTIG 473
Query: 170 E-GVVPTLWDQLNPKNKQDNVVQGFVTGALRNLC 202
G +P L LN ++ + T AL NLC
Sbjct: 474 ALGAIPPLVVLLNEGTQRGK--KDAAT-ALFNLC 504
Score = 96 (38.9 bits), Expect = 8.2e-07, Sum P(2) = 8.2e-07
Identities = 31/99 (31%), Positives = 53/99 (53%)
Query: 494 AVQLIAILTEQVDDSKWAITAAGGIPPLVQLLEAGSQKAREVAAHVLWILCCHSEDIRAC 553
A+ ++AIL+ + K I ++ +P LV+ + GS + RE AA VL LC S D +
Sbjct: 537 ALAILAILSSH-PEGKAIIGSSDAVPSLVEFIRTGSPRNRENAAAVLVHLC--SGDPQHL 593
Query: 554 VESA--GAVPAFLWLLKSGGPKGQDASAMALTKLIRAAD 590
VE+ G + + L +G +G+ +A L ++ R A+
Sbjct: 594 VEAQKLGLMGPLIDLAGNGTDRGKRKAAQLLERISRLAE 632
>SGD|S000000739 [details] [associations]
symbol:VAC8 "Phosphorylated and palmitoylated vacuolar
membrane protein" species:4932 "Saccharomyces cerevisiae"
[GO:0042144 "vacuole fusion, non-autophagic" evidence=IMP]
[GO:0043495 "protein anchor" evidence=IMP;IPI] [GO:0071562
"nucleus-vacuole junction assembly" evidence=IMP] [GO:0071561
"nucleus-vacuole junction" evidence=IDA;IPI] [GO:0000011 "vacuole
inheritance" evidence=IEA;IMP] [GO:0071255 "CVT vesicle assembly"
evidence=IMP] [GO:0016236 "macroautophagy" evidence=IMP]
[GO:0034727 "piecemeal microautophagy of nucleus" evidence=IMP]
[GO:0000329 "fungal-type vacuole membrane" evidence=IDA]
[GO:0071563 "Myo2p-Vac17p-Vac8p transport complex"
evidence=IDA;IPI] [GO:0005774 "vacuolar membrane" evidence=IEA]
[GO:0005773 "vacuole" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] InterPro:IPR000225 InterPro:IPR016024
InterPro:IPR026958 Pfam:PF00514 PROSITE:PS50176 SMART:SM00185
SGD:S000000739 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
eggNOG:COG5064 GO:GO:0000329 EMBL:BK006939 GO:GO:0043495
GO:GO:0000011 GO:GO:0016236 GeneTree:ENSGT00680000099702
EMBL:U18530 GO:GO:0042144 RefSeq:NP_010907.3 GeneID:856709
KEGG:sce:YEL009C KO:K09464 RefSeq:NP_010903.3 GeneID:856702
KEGG:sce:YEL013W KO:K08332 PANTHER:PTHR23315:SF8
HOGENOM:HOG000177331 OMA:EEIQCHA OrthoDB:EOG4QZBV8 GO:GO:0071255
EMBL:AF005267 PIR:S50446 ProteinModelPortal:P39968 SMR:P39968
DIP:DIP-5121N IntAct:P39968 MINT:MINT-517641 STRING:P39968
PaxDb:P39968 PeptideAtlas:P39968 EnsemblFungi:YEL013W
NextBio:982766 Genevestigator:P39968 GermOnline:YEL013W
GO:GO:0071563 GO:GO:0071561 GO:GO:0071562 Uniprot:P39968
Length = 578
Score = 152 (58.6 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 94/411 (22%), Positives = 176/411 (42%)
Query: 1346 GNLLESLYKILSSNSSLELKRNAAELCFIMFGNAKIIANPIASECIQPLISLMQS-DLSI 1404
G L++L ++ S++ L L+R+AA L F K + ++ E ++P++ L+QS D I
Sbjct: 46 GGPLKALTTLVYSDN-LNLQRSAA-LAFAEI-TEKYVRQ-VSREVLEPILILLQSQDPQI 101
Query: 1405 VVESAVCAFERLLDDEQQVELVEGYDVVDLLVRLVSGTNHRLVEATVCALIKLGKDRTPR 1464
V + +++E ++ +VE ++ L+ + G N + V + L R
Sbjct: 102 QVAACAALGNLAVNNENKLLIVE-MGGLEPLINQMMGDNVEVQCNAVGCITNLAT-RDDN 159
Query: 1465 KLQMVKAGIIDNCLDLLPVAPSALCSTIAELFRILTNSSAIARSSDAAKIVEPLFMVLLQ 1524
K ++ +G + L + +T+S + A V L +L
Sbjct: 160 KHKIATSGALIPLTKLAKSKHIRVQRNATGALLNMTHSEENRKELVNAGAVPVLVSLLSS 219
Query: 1525 PDFSLWGQHSALQALVNILEKPQSLVTLKLTPSQVIEPLLSFLESPSHAIQQLGTELLTH 1584
D + Q+ AL NI + L T +++ L+S ++SPS ++ T L +
Sbjct: 220 TDPDV--QYYCTTALSNIAVDEANRKKLAQTEPRLVSKLVSLMDSPSSRVKCQATLALRN 277
Query: 1585 LLAQEHFQQDITTKNAVVPLVQLAGIGILNLQQTAVKALEKISTSWPK---AVADAGGIF 1641
L + +Q +I + LV+L + L +V + IS P + DAG +
Sbjct: 278 LASDTSYQLEIVRAGGLPHLVKLIQSDSIPLVLASVACIRNISIH-PLNEGLIVDAGFLK 336
Query: 1642 EIAKVIIQDDPQPPHSLWESAALVLSNVLRFNTEYYFKVPVVVLVKMLHSTLESTITVA- 1700
+ +++ D + S L+ N + +F+ V K L L+S ++V
Sbjct: 337 PLVRLLDYKDSEEIQCHAVSTLRNLAASSEKNRKEFFESGAVEKCKEL--ALDSPVSVQS 394
Query: 1701 -LNALL-IHERTDASSAEQMTQAGVIDALLDLLRSHQCEETSGRLLEALFN 1749
++A I D S + + +A ++DAL+ + S Q +E SG AL N
Sbjct: 395 EISACFAILALADVSKLD-LLEANILDALIPMTFS-QNQEVSGNAAAALAN 443
>TAIR|locus:2099634 [details] [associations]
symbol:AT3G03440 "AT3G03440" species:3702 "Arabidopsis
thaliana" [GO:0008150 "biological_process" evidence=ND] [GO:0009507
"chloroplast" evidence=ISM] InterPro:IPR000225 InterPro:IPR016024
Pfam:PF00514 PROSITE:PS50176 SMART:SM00185 EMBL:CP002686
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
IPI:IPI00522077 RefSeq:NP_186994.2 UniGene:At.40980
ProteinModelPortal:F4J139 SMR:F4J139 EnsemblPlants:AT3G03440.1
GeneID:821253 KEGG:ath:AT3G03440 OMA:VRDERNK Uniprot:F4J139
Length = 408
Score = 144 (55.7 bits), Expect = 4.7e-06, P = 4.7e-06
Identities = 81/341 (23%), Positives = 146/341 (42%)
Query: 407 VQERVLEAMASLYGNIFLSQWVSHAEAKKVLIGLITMATADVREYL---ILSLTKL---C 460
V +L S+ ++ +S S A ++VL LI D R + I LTK C
Sbjct: 41 VDHELLHTAVSVSSSVSVSS-SSSASIQRVL-SLIRSEDCDSRLFAAKEIRRLTKTSHRC 98
Query: 461 RREVGIWEAIGKRXXXXXXXXXXXXXXXXHQEYAVQLIAILTEQVDD--SKWAITAAGGI 518
RR +A+ H E A L+A+L V D +K +I AG +
Sbjct: 99 RRHFS--QAVEP-----LVSMLRFDSPESHHEAA--LLALLNLAVKDEKNKVSIIEAGAL 149
Query: 519 PPLVQLLEAGSQKAREVAAHVLWILCCHSEDIRACVESAGAVPAFLWLLKSGGPKGQDAS 578
P++ L++ S +E A+ L L + + + + + G VP + ++K G P+ + +
Sbjct: 150 EPIINFLQSNSPTLQEYASASLLTLSASANN-KPIIGANGVVPLLVKVIKHGSPQAKADA 208
Query: 579 AMALTKLIRAADS-----AT--INQLLALLLGDSPSSKAHVIKVLGHVLTMALQEDLVQK 631
MAL+ L D+ AT ++ +L LL SSK K + + + + +
Sbjct: 209 VMALSNLSTLPDNLSMILATKPLSPILNLLKSSKKSSKTSE-KCCSLIEALMVSGEEART 267
Query: 632 GSAANKG-LRSLVQVLNSSNEENQEYAASVLADLF-SMRQDICGSLATDEIVNPCMRLLT 689
G +++G + ++V+VL + + + +E+A VL L S R + + ++ + L
Sbjct: 268 GLVSDEGGVLAVVEVLENGSLQAREHAVGVLLTLCQSDRSKYREPILREGVIPGLLELTV 327
Query: 690 SNTQMVATQSARALGALSRPTKTKTTNKMSYIAEGDVKPLI 730
T ++ R L L R +++ + E V LI
Sbjct: 328 QGTSKSRIKAQRLL-CLLRNSESPRSEVQPDTIENIVSSLI 367
Score = 105 (42.0 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 42/150 (28%), Positives = 71/150 (47%)
Query: 492 EYAVQLIAILTEQVDDSKWAITA-AGGIPPLVQLLEAGSQKAREVAAHVLWILCCHSED- 549
E LI L ++++ + + GG+ +V++LE GS +ARE A VL LC
Sbjct: 249 EKCCSLIEALMVSGEEARTGLVSDEGGVLAVVEVLENGSLQAREHAVGVLLTLCQSDRSK 308
Query: 550 IRACVESAGAVPAFLWLLKSGGPKGQDASAMALTKLIRAADSA-------TINQLLALLL 602
R + G +P L L G K + A L L+R ++S TI +++ L+
Sbjct: 309 YREPILREGVIPGLLELTVQGTSKSR-IKAQRLLCLLRNSESPRSEVQPDTIENIVSSLI 367
Query: 603 ----GDSPSSKAHVIKVLGHVLTMALQEDL 628
GD S KA K+L ++ +++++ L
Sbjct: 368 SHIDGDDQSGKAK--KMLAEMVQVSMEKSL 395
Score = 96 (38.9 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 36/131 (27%), Positives = 66/131 (50%)
Query: 71 AKKEARLLIGSH------AQAMPLFISILRSGTPLAKVNVA--ATLSVLCKDEDLRLKVL 122
AK+ RL SH +QA+ +S+LR +P + A A L++ KDE ++ ++
Sbjct: 85 AKEIRRLTKTSHRCRRHFSQAVEPLVSMLRFDSPESHHEAALLALLNLAVKDEKNKVSII 144
Query: 123 LGGCIPPLLSLLKSESTDTRKAAAEALYEVSSGGLSDDHVGMKIFVTEGVVPTLWDQL-- 180
G + P+++ L+S S ++ A+ +L +S+ + +G GVVP L +
Sbjct: 145 EAGALEPIINFLQSNSPTLQEYASASLLTLSASANNKPIIG-----ANGVVPLLVKVIKH 199
Query: 181 -NPKNKQDNVV 190
+P+ K D V+
Sbjct: 200 GSPQAKADAVM 210
Score = 75 (31.5 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 30/124 (24%), Positives = 61/124 (49%)
Query: 54 SPQER-ELITMRILTIAKAKKEARLLIGSHAQAMPLFISILRSGTPLAKVNVAATLSVLC 112
SP+ E + +L +A ++ ++ I A A+ I+ L+S +P + +A+L L
Sbjct: 117 SPESHHEAALLALLNLAVKDEKNKVSI-IEAGALEPIINFLQSNSPTLQEYASASLLTLS 175
Query: 113 KDEDLRLKVLLGGCIPPLLSLLKSESTDTRKAAAEALYEVSSGGLSDDHVGMKIFVTEGV 172
+ + + G +P L+ ++K S +A A+A+ +S+ D++ M I T+ +
Sbjct: 176 ASANNKPIIGANGVVPLLVKVIKHGSP---QAKADAVMALSNLSTLPDNLSM-ILATKPL 231
Query: 173 VPTL 176
P L
Sbjct: 232 SPIL 235
>UNIPROTKB|Q0IMG9 [details] [associations]
symbol:SPL11 "E3 ubiquitin-protein ligase SPL11"
species:39947 "Oryza sativa Japonica Group" [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0016567 "protein
ubiquitination" evidence=IDA] [GO:0031348 "negative regulation of
defense response" evidence=IMP] [GO:0043069 "negative regulation of
programmed cell death" evidence=IMP] [GO:0048586 "regulation of
long-day photoperiodism, flowering" evidence=IMP]
InterPro:IPR000225 InterPro:IPR003613 InterPro:IPR016024
Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176 SMART:SM00185
SMART:SM00504 UniPathway:UPA00143 GO:GO:0005829 GO:GO:0005634
GO:GO:0006952 SUPFAM:SSF48371 GO:GO:0031348 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0043069 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0009908 GO:GO:0004842 GO:GO:0000151
EMBL:DP000011 EMBL:AP008218 GO:GO:0048586 eggNOG:NOG242845
EMBL:AY652589 EMBL:AY652590 EMBL:AK105835 RefSeq:NP_001067077.2
UniGene:Os.21174 ProteinModelPortal:Q0IMG9 SMR:Q0IMG9
GeneID:4352575 KEGG:dosa:Os03t0275900-01 KEGG:dosa:Os12t0570000-01
KEGG:osa:4352575 Gramene:Q0IMG9 Uniprot:Q0IMG9
Length = 694
Score = 123 (48.4 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 47/182 (25%), Positives = 88/182 (48%)
Query: 45 LEQLHANMSSP--QERELITMRILTIAKAKKEARLLIGSHAQAMPLFISILRSGTPLAKV 102
++ L + + SP +E+ + +AK R+ I + A A+PL +S+L S +
Sbjct: 369 IDALLSKLCSPDTEEQRSAAAELRLLAKRNANNRICI-AEAGAIPLLLSLLSSSDLRTQE 427
Query: 103 NVAATLSVLCKDEDLRLKVLLGGCIPPLLSLLKSESTDTRKAAAEALYEVSSGGLSDDHV 162
+ L L ED + ++ G +P ++ +LK+ S + R+ AA L+ +S + D++
Sbjct: 428 HAVTALLNLSIHEDNKASIISSGAVPSIVHVLKNGSMEARENAAATLFSLS---VIDEY- 483
Query: 163 GMKIFVTE-GVVPTLWDQLNPKNKQDNVVQGFVTGALRNLCGDKDGYWRATLEAGGVDII 221
K+ + G +P L L +++ + AL NLC + RA + AG V +I
Sbjct: 484 --KVTIGGMGAIPALVVLLGEGSQRG---KKDAAAALFNLCIYQGNKGRA-IRAGLVPLI 537
Query: 222 VG 223
+G
Sbjct: 538 MG 539
Score = 83 (34.3 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 26/96 (27%), Positives = 49/96 (51%)
Query: 494 AVQLIAILTEQVDDSKWAITAAGGIPPLVQLLEAGSQKAREVAAHVLWILCCHSEDI--R 551
A+ +++IL+ + K AI AA +P LV+++ +G+ + RE AA V+ LC +
Sbjct: 552 AMAILSILSSH-PEGKAAIGAAEPVPVLVEMIGSGTPRNRENAAAVMLHLCSGEHHLVHL 610
Query: 552 ACVESAGAVPAFLWLLKSGGPKGQDASAMALTKLIR 587
A + G + L +G +G+ + L ++ R
Sbjct: 611 ARAQECGIMVPLRELALNGTDRGKRKAVQLLERMSR 646
>TAIR|locus:2201205 [details] [associations]
symbol:AT1G23180 "AT1G23180" species:3702 "Arabidopsis
thaliana" [GO:0008150 "biological_process" evidence=ND] [GO:0009507
"chloroplast" evidence=IDA] [GO:0009570 "chloroplast stroma"
evidence=IDA] InterPro:IPR000225 InterPro:IPR016024 Pfam:PF00514
PROSITE:PS50176 SMART:SM00185 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0009570 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 InterPro:IPR019308
PANTHER:PTHR13448 EMBL:BT002042 EMBL:BT008799 EMBL:AK226976
IPI:IPI00522633 RefSeq:NP_173731.2 UniGene:At.43289
UniGene:At.50936 ProteinModelPortal:Q8H0U3 SMR:Q8H0U3 PRIDE:Q8H0U3
ProMEX:Q8H0U3 EnsemblPlants:AT1G23180.1 GeneID:838926
KEGG:ath:AT1G23180 TAIR:At1g23180 HOGENOM:HOG000029826
InParanoid:Q8H0U3 OMA:LGGKKCI PhylomeDB:Q8H0U3 ArrayExpress:Q8H0U3
Genevestigator:Q8H0U3 Uniprot:Q8H0U3
Length = 834
Score = 111 (44.1 bits), Expect = 5.6e-06, Sum P(3) = 5.6e-06
Identities = 32/88 (36%), Positives = 51/88 (57%)
Query: 491 QEYAV-QLIAILTEQVDDSKWAITAAGGIPPLVQLLEAGSQKAREVAAHVLWILCCHSED 549
+E AV +L I++E V +S + + GGI PLV+LLE +++ E + VL+ L SE+
Sbjct: 739 KEAAVLELNKIVSEGVPESIQTLASQGGIEPLVKLLEERNERCVEASLSVLYNLTMDSEN 798
Query: 550 IRACVESAGAVPAFLWLLKSGGPKGQDA 577
A + AGAVP ++ S P+ + A
Sbjct: 799 HTAIIR-AGAVPVLRRIVMSQRPQWEKA 825
Score = 88 (36.0 bits), Expect = 5.6e-06, Sum P(3) = 5.6e-06
Identities = 37/118 (31%), Positives = 55/118 (46%)
Query: 111 LCKDEDLRLKVLLGGCIPPLLSLLKSESTDTRKAAAEALYEVSSGGLSDDHVGMKIFVTE 170
L DE++R KV + L+S L+ + + ++AA L ++ H KI V
Sbjct: 217 LTVDEEIREKVADFDILRLLISFLEDDDVNVKEAAGGVLANLALS--RSTH---KILVEV 271
Query: 171 GVVPTLWDQL---NPKNKQDNVVQGFVTGALRNLCGDKDGYWRA-TLEAGGVDI-IVG 223
GV+P L L N +NK V++ L L KD Y+R +E G V I I+G
Sbjct: 272 GVIPKLAKLLKADNTENKGSKVIRKEARNVLLELA--KDEYYRILVIEEGVVPIPIIG 327
Score = 52 (23.4 bits), Expect = 5.6e-06, Sum P(3) = 5.6e-06
Identities = 10/17 (58%), Positives = 14/17 (82%)
Query: 255 IDSGAVKALVQLVGQNN 271
+++GAVK LVQL+ NN
Sbjct: 463 MEAGAVKPLVQLLANNN 479
>TAIR|locus:2178818 [details] [associations]
symbol:AT5G58680 "AT5G58680" species:3702 "Arabidopsis
thaliana" [GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0009693 "ethylene
biosynthetic process" evidence=RCA] InterPro:IPR000225
InterPro:IPR016024 Pfam:PF00514 PROSITE:PS50176 SMART:SM00185
EMBL:CP002688 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
EMBL:AY084344 EMBL:DQ447090 IPI:IPI00540553 RefSeq:NP_200676.1
UniGene:At.29268 ProteinModelPortal:Q8LGC7 SMR:Q8LGC7
EnsemblPlants:AT5G58680.1 GeneID:835982 KEGG:ath:AT5G58680
TAIR:At5g58680 HOGENOM:HOG000084464 InParanoid:Q8LGC7 OMA:LCSTNEN
PhylomeDB:Q8LGC7 ProtClustDB:CLSN2686276 Genevestigator:Q8LGC7
Uniprot:Q8LGC7
Length = 357
Score = 140 (54.3 bits), Expect = 9.8e-06, P = 9.8e-06
Identities = 58/240 (24%), Positives = 108/240 (45%)
Query: 491 QEYAVQLIAILTEQVDDSKWAITAAGGIPPLVQLLEAGSQKAREVAAHVLWILCCHSEDI 550
QEY V + L+ D++K I ++G + PLV L G+ +E AA L L E+
Sbjct: 120 QEYGVTAVLNLS-LCDENKEMIVSSGAVKPLVNALRLGTPTTKENAACALLRLS-QVEEN 177
Query: 551 RACVESAGAVPAFLWLLKSGGPKGQDASAMALTKLI-------RAADSATINQLLALLL- 602
+ + +GA+P + LL++GG + + ++ AL L RA +S + L+ L++
Sbjct: 178 KITIGRSGAIPLLVNLLENGGFRAKKDASTALYSLCSTNENKTRAVESGIMKPLVELMID 237
Query: 603 --GDSPSSKAHVIKVLGHVLTMALQEDLVQKGSAANKGLRSLVQVLNSSNEENQEYAASV 660
D A V+ +L + + +V++G G+ LV+++ + + +E + S+
Sbjct: 238 FESDMVDKSAFVMNLL--MSAPESKPAVVEEG-----GVPVLVEIVEAGTQRQKEISVSI 290
Query: 661 LADLFSMRQDICGSLATDEIVNPCMRLLTSNTQMVATQSARALGALSRPTKTKTTNKMSY 720
L L +A + V P + L + A A AL L R + + + +
Sbjct: 291 LLQLCEESVVYRTMVAREGAVPPLVALSQGSASRGAKVKAEALIELLRQPRQQQQQQQHF 350
Score = 140 (54.3 bits), Expect = 9.8e-06, P = 9.8e-06
Identities = 65/252 (25%), Positives = 114/252 (45%)
Query: 17 SSTSQPRESNGTSAMDDPESTMSTVAKFLEQLHANMSSPQERELITMRILTIAKAKKEAR 76
+S S+ R+ + A+D+ + + + LE + SS +E++ M I ++K K E R
Sbjct: 41 TSESRQRKLFLSCAVDNSDDVIRNLITHLE----SSSSIEEQKQAAMEIRLLSKNKPENR 96
Query: 77 LLIGSHAQAMPLFISILRSGTPLAKVNVAATLSV-LCKDEDLRLKVLLGGCIPPLLSLLK 135
+ + PL I S L + V A L++ LC DE+ + ++ G + PL++ L+
Sbjct: 97 IKLAKAGAIKPLVSLISSSDLQLQEYGVTAVLNLSLC-DENKEM-IVSSGAVKPLVNALR 154
Query: 136 SESTDTRKAAAEALYEVSSGGLSDDHVGMKIFVTEGVVPTLWDQLNPKNKQDNVVQGFVT 195
+ T++ AA AL +S + +G G +P L + L +N + T
Sbjct: 155 LGTPTTKENAACALLRLSQVEENKITIGRS-----GAIPLLVNLL--ENGGFRAKKDAST 207
Query: 196 GALRNLCGDKDGYWRATLEAGGVDIIVGXXXXXXXXXXXXXXXXXXRLMLAFGDSIPTVI 255
AL +LC + RA +E+G + +V LM A +S P V+
Sbjct: 208 -ALYSLCSTNENKTRA-VESGIMKPLVELMIDFESDMVDKSAFVMNLLMSA-PESKPAVV 264
Query: 256 DSGAVKALVQLV 267
+ G V LV++V
Sbjct: 265 EEGGVPVLVEIV 276
>TAIR|locus:2130699 [details] [associations]
symbol:AT4G16490 "AT4G16490" species:3702 "Arabidopsis
thaliana" [GO:0008150 "biological_process" evidence=ND] [GO:0006816
"calcium ion transport" evidence=RCA] [GO:0007030 "Golgi
organization" evidence=RCA] [GO:0009651 "response to salt stress"
evidence=RCA] InterPro:IPR000225 InterPro:IPR016024 Pfam:PF00514
PROSITE:PS50176 SMART:SM00185 EMBL:CP002687 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 IPI:IPI00531461
RefSeq:NP_567501.4 UniGene:At.23147 UniGene:At.75353
ProteinModelPortal:F4JMH0 SMR:F4JMH0 EnsemblPlants:AT4G16490.1
GeneID:827347 KEGG:ath:AT4G16490 OMA:DLQPTVK Uniprot:F4JMH0
Length = 472
Score = 153 (58.9 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 63/237 (26%), Positives = 112/237 (47%)
Query: 491 QEYAVQLIAILTEQVDDSKWAITAAGG-IPPLVQLLEAGSQKAREVAAHVLWILCCHSED 549
QE+AV A+L + D A+ AAGG I LV +L+ G++ +++ AA L L E+
Sbjct: 242 QEHAVT--ALLNLSLHDQNKAVIAAGGAIKSLVWVLKTGTETSKQNAACALLSLALLEEN 299
Query: 550 IRACVESAGAVPAFLWLLKSGGPKGQDASAMALTKLI-------RAADSATINQLLALLL 602
+ + + GA+P + LL +G +G+ + L KL RA + + L+ L+
Sbjct: 300 -KGSIGACGAIPPLVSLLLNGSCRGKKDALTTLYKLCTLQQNKERAVTAGAVKPLVDLVA 358
Query: 603 GDSPSSKAHVIKVLGHVLTMAL-QEDLVQKGSAANKGLRSLVQVLNSSNEENQEYAASVL 661
+ + VL + + +E +V++G G+ +LV+ + + + +E+A L
Sbjct: 359 EEGTGMAEKAMVVLSSLAAIDDGKEAIVEEG-----GIAALVEAIEDGSVKGKEFAILTL 413
Query: 662 ADLFSMRQDICGSLATDEIVNPCMRLLTSNTQMV-ATQSA-RALGALSRPTKTKTTN 716
L S G L + + P + L S + V A + A R LG L P K +++
Sbjct: 414 LQLCSDSVRNRGLLVREGAIPPLVGLSQSGSVSVRAKRKAERLLGYLREPRKEASSS 470
Score = 130 (50.8 bits), Expect = 0.00020, P = 0.00020
Identities = 58/253 (22%), Positives = 105/253 (41%)
Query: 542 ILCCHSEDIRACVESA--GAVPAFLWLLKSGGPKGQDASAMALTKLIRAADSATINQLLA 599
I C ED++ V+ G + + + +S K + + + +S I L+
Sbjct: 173 IECISPEDLQPTVKLCIDGLRSSSVAIKRSAAAKLRLLAKNRADNRVLIGESGAIQALIP 232
Query: 600 LLLGDSPSSKAHVIKVLGHVLTMALQEDLVQKGSAANKGLRSLVQVLNSSNEENQEYAAS 659
LL + P ++ H + L L ++L D + AA ++SLV VL + E +++ AA
Sbjct: 233 LLRCNDPWTQEHAVTAL---LNLSLH-DQNKAVIAAGGAIKSLVWVLKTGTETSKQNAAC 288
Query: 660 VLADLFSMRQDICGSLATDEIVNPCMRLLTSNTQMVATQSARALGALSRPTKTKTTNKMS 719
L L ++ ++ GS+ + P + LL + + + L L T NK
Sbjct: 289 ALLSL-ALLEENKGSIGACGAIPPLVSLLLNGSCRGKKDALTTLYKLC----TLQQNKER 343
Query: 720 YIAEGDVKPLIKLAKTSSIDXXXXXXXXXXXXXSDPDIAAEVLLEDVVSALTRVLAEGTS 779
+ G VKPL+ L + D ++ E ++AL + +G+
Sbjct: 344 AVTAGAVKPLVDLVAEEGTGMAEKAMVVLSSLAAIDDGKEAIVEEGGIAALVEAIEDGSV 403
Query: 780 EGKKNASRALHQL 792
+GK+ A L QL
Sbjct: 404 KGKEFAILTLLQL 416
Score = 37 (18.1 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 7/16 (43%), Positives = 13/16 (81%)
Query: 256 DSGAVKALVQLVGQNN 271
+SGA++AL+ L+ N+
Sbjct: 223 ESGAIQALIPLLRCND 238
>TAIR|locus:2198235 [details] [associations]
symbol:AT1G01830 "AT1G01830" species:3702 "Arabidopsis
thaliana" [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR000225 InterPro:IPR016024 Pfam:PF00514 PROSITE:PS50176
SMART:SM00185 EMBL:CP002684 GenomeReviews:CT485782_GR
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
eggNOG:NOG268795 HOGENOM:HOG000239669 ProtClustDB:CLSN2683369
EMBL:AY059739 EMBL:AY091273 IPI:IPI00535901 RefSeq:NP_001077443.1
RefSeq:NP_001077444.1 RefSeq:NP_563637.1 UniGene:At.26641
ProteinModelPortal:Q93YW3 SMR:Q93YW3 EnsemblPlants:AT1G01830.1
EnsemblPlants:AT1G01830.2 EnsemblPlants:AT1G01830.3 GeneID:839264
KEGG:ath:AT1G01830 TAIR:At1g01830 InParanoid:Q93YW3 OMA:GHLESKH
PhylomeDB:Q93YW3 ArrayExpress:Q93YW3 Genevestigator:Q93YW3
Uniprot:Q93YW3
Length = 574
Score = 151 (58.2 bits), Expect = 2.3e-05, Sum P(2) = 2.3e-05
Identities = 79/294 (26%), Positives = 137/294 (46%)
Query: 491 QEYAVQLIAILTEQVDDSKWAITAAGGIPPLVQLLEAGSQKAREVAAHVLWILCCHSEDI 550
+E AV LI++L E +W I+ G +PPLV+L+E+GS + +E AA + L E+
Sbjct: 227 REKAVNLISVLAESGHCDEWLISE-GVLPPLVRLIESGSLETKEKAAIAIQRLSMTEENA 285
Query: 551 RACVESAGAVPAFLWLLKSGGPKGQDASAMALTKL-----IRA--ADSATINQLLALLL- 602
R G P + L K+G Q ASA AL + +R A+ I + LL
Sbjct: 286 REIAGHGGITP-LIDLCKTGDSVSQAASAAALKNMSAVSELRQLLAEEGIIRVSIDLLNH 344
Query: 603 GDSPSSKAHVIKVLGHVLTMALQEDLVQKGSAANKGLRSLVQVLNSSNEENQEYAASVLA 662
G S+ H+ + L + LT A D +++ + G+ SL+ L+ Q+ A + L
Sbjct: 345 GILLGSREHMAECLQN-LTAA--SDALREAIVSEGGVPSLLAYLDGPLP--QQPAVTALR 399
Query: 663 DLF-SMRQDICGSLATDEIVNPCMRLLTSNTQMVATQSARALGALSRPTKTKTTNKMSYI 721
+L S+ +I +L + P +R + + + A Q+A + A+ R + T ++ +
Sbjct: 400 NLIPSVNPEIWVALN----LLPRLRHVLKSGSLGAQQAAAS--AICRFACSPETKRL--V 451
Query: 722 AE-GDVKPLIKLAKTSSIDXXXXXXXXXXXXXSDPDIAAEVLLEDVVSALTRVL 774
E G + ++KL ++ S ++ I E L +D S LT ++
Sbjct: 452 GESGCIPEIVKLLESKSNGCREAAAQAIAGLVAEGRIRRE-LKKDGKSVLTNLV 504
Score = 40 (19.1 bits), Expect = 2.3e-05, Sum P(2) = 2.3e-05
Identities = 11/28 (39%), Positives = 14/28 (50%)
Query: 927 AALLICAAKEHKKQSMDALDLSGYLKPL 954
A LL + E K+ M + GYLK L
Sbjct: 521 AGLLGMSGSEKSKKMMVSYGAIGYLKKL 548
>MGI|MGI:1918132 [details] [associations]
symbol:Armc3 "armadillo repeat containing 3" species:10090
"Mus musculus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000225
InterPro:IPR016024 Pfam:PF00514 PROSITE:PS50176 SMART:SM00185
MGI:MGI:1918132 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 EMBL:AK041744 EMBL:AL929034 IPI:IPI00226920
IPI:IPI00606353 RefSeq:NP_001074552.1 UniGene:Mm.276696
ProteinModelPortal:A2AU72 SMR:A2AU72 PhosphoSite:A2AU72
PaxDb:A2AU72 PRIDE:A2AU72 Ensembl:ENSMUST00000114640 GeneID:70882
KEGG:mmu:70882 UCSC:uc008imd.1 CTD:219681 eggNOG:NOG265712
GeneTree:ENSGT00680000099702 HOGENOM:HOG000231960
HOVERGEN:HBG059366 InParanoid:A2AU72 OMA:LTNMAMQ OrthoDB:EOG47M1XS
NextBio:332490 Bgee:A2AU72 CleanEx:MM_ARMC3 Genevestigator:A2AU72
InterPro:IPR026840 Pfam:PF14381 Uniprot:A2AU72
Length = 881
Score = 116 (45.9 bits), Expect = 7.9e-05, Sum P(3) = 7.9e-05
Identities = 56/225 (24%), Positives = 96/225 (42%)
Query: 492 EYAV-QLIAILTEQV---D-DSKWAITAAGGIPPLVQLLEAGSQKAREVAAHVLWILCCH 546
EY + QL+A+ T V D +++ + G+ L ++LE V A + C
Sbjct: 203 EYPIIQLLALKTLGVITCDKEARTMLKENQGLDHLTKILETKELNDLHVEALSVIANCLE 262
Query: 547 SEDIRACVESAGAVPAFLWLLKSGG-PKGQDASAMALTKLI------RAADSATINQLLA 599
D ++ G++ L +S P Q +A A+ K + + + L
Sbjct: 263 DMDTMVLMQQTGSLKKVLSFAESSTIPDIQKNAAKAIAKAAYDPENRKVFHEQEVEKCLV 322
Query: 600 LLLG-DSPSSKAHVIKVLGHVLTMALQEDLVQKGSAANKGLRSLVQVLNSSNEENQEYAA 658
LLG DS +K + + AL E+L K +G+ +VQ+L S NEE +E AA
Sbjct: 323 TLLGSDSDGTKIAASQAIS-----ALCENLSCKEFFNTQGIPQIVQLLRSDNEEVREAAA 377
Query: 659 SVLADLFSMRQDICGSLATDEIVNPCMRLLTSNTQMVATQSARAL 703
LA+L + + A + ++P + +L+S +A L
Sbjct: 378 LALANLTTSSPANANAAAEADAIDPLINILSSKRDGAIANAATVL 422
Score = 78 (32.5 bits), Expect = 7.9e-05, Sum P(3) = 7.9e-05
Identities = 34/107 (31%), Positives = 46/107 (42%)
Query: 39 STVAKFLEQLHANMS-----SPQERELI-TMRILTIAKAKKE--ARLLIGSHAQAMPLFI 90
S V K L +L S SP+E +I L +A E ++ I H PL I
Sbjct: 98 SDVKKLLRELEVMNSVIAQLSPEEEVVIHEFASLCLANMSVEYTGKVQIFEHGGLEPL-I 156
Query: 91 SILRSGTPLAKVNVAATLSVLCKDEDLRLKVLLGGCIPPLLSLLKSE 137
+L S P K N + L +D R + IPP+L LL+SE
Sbjct: 157 RLLSSSDPDVKKNSIECIYNLVQDFQCRTTLQELNAIPPILELLRSE 203
Score = 46 (21.3 bits), Expect = 7.9e-05, Sum P(3) = 7.9e-05
Identities = 14/46 (30%), Positives = 28/46 (60%)
Query: 1080 IIPALALL-LRSDEVIDRFFAAQAMASLVCSGSKGIILAIANSGAV 1124
++P + LL ++DEV R A+ A+ +VC+G + + + + GA+
Sbjct: 482 LVPLVGLLHSKNDEV--RRHASWAV--MVCAGDEPMAVELCRLGAL 523
>ZFIN|ZDB-GENE-030616-533 [details] [associations]
symbol:ankar "ankyrin and armadillo repeat
containing" species:7955 "Danio rerio" [GO:0008150
"biological_process" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR000225 InterPro:IPR002110 InterPro:IPR016024
Pfam:PF00514 PROSITE:PS50088 PROSITE:PS50176 SMART:SM00185
SMART:SM00248 ZFIN:ZDB-GENE-030616-533 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 Gene3D:1.25.40.20
InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297
EMBL:CT737230 CTD:150709 GeneTree:ENSGT00680000100065
IPI:IPI00758871 RefSeq:NP_001035135.2 UniGene:Dr.85578
Ensembl:ENSDART00000100342 GeneID:368636 KEGG:dre:368636
NextBio:20813084 ArrayExpress:F1QF11 Bgee:F1QF11 Uniprot:F1QF11
Length = 1400
Score = 113 (44.8 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 64/255 (25%), Positives = 110/255 (43%)
Query: 495 VQLIAILTEQVDDSKWAITAAGGIPPLVQLLEAGSQKAREVAAHVLWILCCH-SEDIRAC 553
++ + + TE + I AGG+P LV LL + Q + +A VL CH +E+ + C
Sbjct: 723 LEALCVNTESFSED---ILDAGGVPVLVSLLCSDRQVVQCMATAVL----CHMTENSQVC 775
Query: 554 VESA--GAVPAFLWLLKSGGPKGQDASAMALTKLIRAADSATINQLLALLLG-----DSP 606
E GAVP + LL P+ A+ L L AA S L+A L G +
Sbjct: 776 EELVHHGAVPILIKLLSVHQPELDSRCAVILADL--AAHSKQHQSLIADLGGVALVVNLL 833
Query: 607 SSKAHVIKVLGH--VLTMALQEDLVQKGSAANKGLRSLVQVLNSSNEENQEYAASVLADL 664
+S + V G + T+ ++ Q A G+ L+Q+L ++ QE A LA+L
Sbjct: 834 TSDLQDVLVNGVRCIRTLCVRSPHNQTAVAHAGGVPHLIQILAVDSDTLQEEACLALAEL 893
Query: 665 FSMRQDICGSLATDEIVNPCMRLLTSNTQMVATQSARALGALSRPTKTKTTNKMSYIAEG 724
++ + V ++ L V ++A AL +L+ + + ++ +
Sbjct: 894 SRGHRENQALICEAGAVGALVQALRHRKISVKVKAASALESLA---SHNSAIQQCFLRQS 950
Query: 725 DVKPLIKLAKTSSID 739
K L++L +D
Sbjct: 951 APKYLLQLLTVFQLD 965
Score = 106 (42.4 bits), Expect = 0.00084, Sum P(2) = 0.00084
Identities = 79/360 (21%), Positives = 139/360 (38%)
Query: 387 DARQIEDILVMLLKPHDNKLVQERVLEAMASLYGNI-FLSQWVSHAEAKKVLIGLITMAT 445
D + ILV +L+ D K + E+ L + +L N S+ + A VL+ L+
Sbjct: 696 DGLPVWKILVEMLQIEDFKRM-EKTLGCLEALCVNTESFSEDILDAGGVPVLVSLLC--- 751
Query: 446 ADVREYLILSLTKLCRREVGIWEAIGKRXXXXXXXXXXXXXXXXHQ-EYAVQLIAILTEQ 504
+D + ++ LC + + HQ E + IL +
Sbjct: 752 SDRQVVQCMATAVLCHMTEN--SQVCEELVHHGAVPILIKLLSVHQPELDSRCAVILADL 809
Query: 505 VDDSKW---AITAAGGIPPLVQLLEAGSQKAREVAAHVLWILCCHSEDIRACVESAGAVP 561
SK I GG+ +V LL + Q + LC S + V AG VP
Sbjct: 810 AAHSKQHQSLIADLGGVALVVNLLTSDLQDVLVNGVRCIRTLCVRSPHNQTAVAHAGGVP 869
Query: 562 AFLWLLKSGGPKGQDASAMALTKLIRA--ADSATINQLLAL--LLGDSPSSKAHV-IKVL 616
+ +L Q+ + +AL +L R + A I + A+ L+ K V +K
Sbjct: 870 HLIQILAVDSDTLQEEACLALAELSRGHRENQALICEAGAVGALVQALRHRKISVKVKAA 929
Query: 617 GHVLTMALQEDLVQKGSAANKGLRSLVQVLNSSNEENQEYAASVLADLFSMRQDICGSLA 676
+ ++A +Q+ + L+Q+L + +E A L L + +A
Sbjct: 930 SALESLASHNSAIQQCFLRQSAPKYLLQLLTVFQLDVREQGAIALWALAGQSLNQQKLMA 989
Query: 677 TDEIVNPCMRLLTSNTQMVATQSARALGALSRPTKTKTTNKMSYIAEGDVKPLIKLAKTS 736
+ + LL S + + RA+ ALSR ++ ++ + E V PL++L + S
Sbjct: 990 EQMGYSVILDLLLSPSDKIQYVGCRAVIALSRDSRI---HQNGFCRENGVPPLVRLLRGS 1046
Score = 84 (34.6 bits), Expect = 8.6e-05, Sum P(3) = 8.6e-05
Identities = 40/183 (21%), Positives = 72/183 (39%)
Query: 83 AQAMPLFISILRSGTPLAKVNVAATLSVLCKDEDLRLKVLLGGCIPPLLSLLKSESTDTR 142
A +P+ +S+L S + + A L + ++ + +++ G +P L+ LL +
Sbjct: 740 AGGVPVLVSLLCSDRQVVQCMATAVLCHMTENSQVCEELVHHGAVPILIKLLSVHQPELD 799
Query: 143 KAAAEALYEVSSGGLSDDHVGMKIFVTEGVVPTLWDQLNPKNKQDNVVQGFVTGALRNLC 202
A L ++++ S H + I GV + L + QD +V G +R LC
Sbjct: 800 SRCAVILADLAAH--SKQHQSL-IADLGGVALVV--NLLTSDLQDVLVNG--VRCIRTLC 852
Query: 203 GDKDGYWRATLEAGGVDIIVGXXXXXXXXXXXXXXXXXXRLMLAFGDSIPTVIDSGAVKA 262
A AGGV ++ L ++ + ++GAV A
Sbjct: 853 VRSPHNQTAVAHAGGVPHLIQILAVDSDTLQEEACLALAELSRGHRENQALICEAGAVGA 912
Query: 263 LVQ 265
LVQ
Sbjct: 913 LVQ 915
Score = 83 (34.3 bits), Expect = 8.6e-05, Sum P(3) = 8.6e-05
Identities = 42/184 (22%), Positives = 74/184 (40%)
Query: 395 LVMLLKPHDNKLVQERVLEAMASLYG-NIFLSQWVSHAEAKKVLIGLITMATADVREYLI 453
LV L+ H V+ + A+ SL N + Q A K L+ L+T+ DVRE
Sbjct: 913 LVQALR-HRKISVKVKAASALESLASHNSAIQQCFLRQSAPKYLLQLLTVFQLDVREQGA 971
Query: 454 LSLTKLCRREVGIWEAIGKRXXXXXXXXXXXXXXXXHQEYAVQLIAILTEQVDDSKWAIT 513
++L L + + + + ++ Q + + L+ +
Sbjct: 972 IALWALAGQSLNQQKLMAEQMGYSVILDLLLSPSDKIQYVGCRAVIALSRDSRIHQNGFC 1031
Query: 514 AAGGIPPLVQLLEAGSQKAREVAAHVLWILCC--------HSEDIRACVESAGAVPAFLW 565
G+PPLV+LL GS+ ++ V+ L C +++ + V A+P L
Sbjct: 1032 RENGVPPLVRLLR-GSRTGQKTLLSVIEALGCLCIGVALTTNKNSQKTVYREQAIPTLLE 1090
Query: 566 LLKS 569
LLK+
Sbjct: 1091 LLKA 1094
Score = 80 (33.2 bits), Expect = 8.6e-05, Sum P(3) = 8.6e-05
Identities = 56/214 (26%), Positives = 87/214 (40%)
Query: 1558 QVIEPLLSFLES-PSHAIQ-QLGTELLTHLLAQEHFQQDITTKN--AVVPLVQLAGIGIL 1613
Q I LL L++ S I+ Q+ L LL + Q++ + + +V+L
Sbjct: 1083 QAIPTLLELLKAHKSQEIKVQVAQTLACVLLGNQKLQREFWEQEDFSYENIVELLNAENK 1142
Query: 1614 NLQQTAVKALEKI---STSWPKAVADAGGI-FEIAKVIIQDDPQPPHSLWESAALVLSNV 1669
N+ A AL S + KA+ GGI +I + + D + + +VL+ V
Sbjct: 1143 NISLDAGHALSLFAYNSKAHQKAIRQLGGIPGKIYETFLNSDNETEKAKAAFQTVVLARV 1202
Query: 1670 LRFNTEYYFKVP-VVVLVKMLHSTLEST--ITVALNALLIHERTDASSAEQMTQAGVIDA 1726
+ + E V +LV++L S +T IT L A L H R + A + G +
Sbjct: 1203 ISGSDEVTLTARGVTILVELLQSDQSTTVIITAQLLASLAHMRAGITDA--IVSMGATEH 1260
Query: 1727 LLDLLRSHQCEETSGRLLEAL----FNNGRIRQM 1756
L L S EE AL FN RQ+
Sbjct: 1261 LSAHLDSED-EEVRTACTSALGYLTFNRYAHRQL 1293
>TAIR|locus:2087565 [details] [associations]
symbol:AT3G20170 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000225
InterPro:IPR000357 InterPro:IPR016024 Pfam:PF02985 PROSITE:PS50176
SMART:SM00185 EMBL:CP002686 GenomeReviews:BA000014_GR
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
InterPro:IPR021133 PROSITE:PS50077 EMBL:AP000383 EMBL:BT030397
IPI:IPI00525028 RefSeq:NP_188652.1 UniGene:At.50207
ProteinModelPortal:Q9LJY1 SMR:Q9LJY1 PaxDb:Q9LJY1 PRIDE:Q9LJY1
ProMEX:Q9LJY1 EnsemblPlants:AT3G20170.1 GeneID:821561
KEGG:ath:AT3G20170 TAIR:At3g20170 eggNOG:NOG301725
HOGENOM:HOG000153032 InParanoid:Q9LJY1 OMA:KCLWSLV PhylomeDB:Q9LJY1
ProtClustDB:CLSN2684731 Genevestigator:Q9LJY1 Uniprot:Q9LJY1
Length = 475
Score = 123 (48.4 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 46/174 (26%), Positives = 82/174 (47%)
Query: 493 YAVQLIAILTEQVDDSKWAITAAGGIPPLVQLLEAGSQKAREVAAHVLWILCCHSEDIRA 552
+A+ LI + T + ++ + AG IP LV L G KA+ +A + L I+ +E IR
Sbjct: 215 HAIGLIGV-TRR---ARRILVEAGVIPALVDLYRDGDDKAKLLAGNALGIISAQTEYIRP 270
Query: 553 CVESAGAVPAFLWLLKSGGPKGQDASAMALTKLIRAADSATI--NQLLALLLGDSPSSKA 610
E AG++P ++ LL P G+D + L A +A + QL+ +L +K
Sbjct: 271 VTE-AGSIPLYVELLSGQDPMGKDIAEDVFCILAVAEGNAVLIAEQLVRILRAGDNEAKL 329
Query: 611 HVIKVLGHVLTMALQEDLVQKGSAANKGLRSLVQVLNSSNEENQEYAASVLADL 664
VL + ++ +GS A + L+++L + E +E + ++ L
Sbjct: 330 AASDVLWDLAGYRHSVSVI-RGSGA---IPLLIELLRDGSLEFRERISGAISQL 379
Score = 60 (26.2 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 48/222 (21%), Positives = 92/222 (41%)
Query: 62 TMRILTIAKAKKEARLLIGSH-AQAMPLFISILR-SGTPLAKVNVAAT--LSVL--CKDE 115
++R+ ++ K + S+ ++A+P+ +LR S V AA L + C E
Sbjct: 35 SIRVRSVLKLSDLTNRVPESYISRAIPILAGLLRVSDDSNRSVQAAAAHCLKCITCCGGE 94
Query: 116 DLRLKVLLGGC--IPPLLSLLKSESTDT---RKAAAEALYEVSSGGLSDDHVGMKIFVTE 170
+ V +G C I LL LL +TD R+ + L+ + + G S VG+
Sbjct: 95 ESGFAVTMGRCGVIASLLGLLLEANTDGNVFRRIWVKCLWSLVTFG-SSIRVGLARL--- 150
Query: 171 GVVPTLWDQLNPKNKQDNVVQGFVTGALRNLCGDKDGYWRATLEAGGVDIIVGXXXXXXX 230
G + + +LN N +D+ + ++ L L ++ R + +GG+ +V
Sbjct: 151 GGLEIVIRELN--NWEDDGSRWYLLEILSALTTIRESR-RVLVHSGGLKFLVEAAKVGNL 207
Query: 231 XXXXXXXXXXXRLMLAFGDSIPTVIDSGAVKALVQLVGQNND 272
L+ + ++++G + ALV L +D
Sbjct: 208 ASRERACHAIG-LIGVTRRARRILVEAGVIPALVDLYRDGDD 248
>ASPGD|ASPL0000008980 [details] [associations]
symbol:AN12408 species:162425 "Emericella nidulans"
[GO:0000329 "fungal-type vacuole membrane" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0003674
"molecular_function" evidence=ND] [GO:0000011 "vacuole inheritance"
evidence=IEA] InterPro:IPR000225 InterPro:IPR016024
InterPro:IPR026958 Pfam:PF00514 PROSITE:PS50176 SMART:SM00185
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0000329
EMBL:BN001301 GO:GO:0000011 GO:GO:0016236 GO:GO:0042144
PANTHER:PTHR23315:SF8 HOGENOM:HOG000177331 OMA:EEIQCHA
GO:GO:0071255 GO:GO:0071563 GO:GO:0071561 GO:GO:0071562
ProteinModelPortal:C8V2Y6 EnsemblFungi:CADANIAT00007711
Uniprot:C8V2Y6
Length = 579
Score = 132 (51.5 bits), Expect = 0.00017, P = 0.00017
Identities = 93/433 (21%), Positives = 176/433 (40%)
Query: 1342 TDI-DGNLLESLYKILSSNSSLELKRNAAELCFIMFGNAKIIANPIASECIQPLISLMQS 1400
TD G L +L ++ S++ ++L+R+A+ L F + + + ++P++ L+QS
Sbjct: 62 TDFFSGEPLRALSTLVYSDN-VDLQRSAS-LTFAEITERDV--REVDRDTLEPILFLLQS 117
Query: 1401 DLSIVVESAVCAFERL-LDDEQQVELVEGYDVVDLLVRLVSGTNHRLVEATVCALIKLGK 1459
V +A A L ++ + +V +V + L+ +++S A C + L
Sbjct: 118 SDIEVQRAASAALGNLAVNADNKVLIVALGGLAPLIKQMMSPNVEVQCNAVGC-ITNLAT 176
Query: 1460 DRTPRKLQMVKAGIIDNCLDLLPVAPSALCSTIAELFRILTNSSAIARSSDAAKIVEPLF 1519
K ++ ++G + + L + +T+S + A + L
Sbjct: 177 HED-NKAKIARSGALGPLIRLAKSKDMRVQRNATGALLNMTHSDDNRQQLVNAGAIPVLV 235
Query: 1520 MVLLQPDFSLWGQHSALQALVNILEKPQSLVTLKLTPSQVIEPLLSFLESPSHAIQQLGT 1579
+L D + Q+ AL NI + L T S++++ L+ ++S + +Q
Sbjct: 236 QLLSSSDVDV--QYYCTTALSNIAVDASNRKRLAQTESRLVQSLVHLMDSSTPKVQCQAA 293
Query: 1580 ELLTHLLAQEHFQQDITTKNAVVPLVQLAGIGILNLQQTAVKALEKISTSWP---KAVAD 1636
L +L + E +Q +I + PL++L L L +AV + IS P + D
Sbjct: 294 LALRNLASDEKYQLEIVRAKGLPPLLRLLQSSYLPLILSAVACIRNISIH-PLNESPIID 352
Query: 1637 AGGIFEIAKVIIQDDPQPP--HSLWESAALVLSNVLRFNTEYYFKVPVVV----LVKMLH 1690
AG + + ++ D + H++ L S+ N E + V LV +
Sbjct: 353 AGFLKPLVDLLGSTDNEEIQCHAISTLRNLAASSDR--NKELVLQAGAVQKCKDLVLRVP 410
Query: 1691 STLESTITVALNALLIHERTDASSAEQMTQAGVIDALLDLLRSHQCEETSGRLLEALFNN 1750
T++S +T A+ L + + + GV D L+ L S E G AL N
Sbjct: 411 VTVQSEMTAAIAVLALSDELKP----HLLSLGVFDVLIPLTESDSIE-VQGNSAAALGN- 464
Query: 1751 GRIRQMKVSKYAI 1763
KV Y+I
Sbjct: 465 ---LSSKVGDYSI 474
>UNIPROTKB|O93614 [details] [associations]
symbol:rap1gds1-a "Rap1 GTPase-GDP dissociation stimulator
1-A" species:8355 "Xenopus laevis" [GO:0005575 "cellular_component"
evidence=ND] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IPI] [GO:0017160 "Ral GTPase binding"
evidence=IPI] [GO:0043547 "positive regulation of GTPase activity"
evidence=IPI] InterPro:IPR000225 InterPro:IPR016024 Pfam:PF00514
PROSITE:PS50176 SMART:SM00185 GO:GO:0005737 GO:GO:0007264
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0005856
GO:GO:0005096 GO:GO:0043547 EMBL:AJ005870 EMBL:BC079775
RefSeq:NP_001081078.1 UniGene:Xl.1110 ProteinModelPortal:O93614
IntAct:O93614 GeneID:394369 KEGG:xla:394369 CTD:394369
Xenbase:XB-GENE-1004458 HOVERGEN:HBG001622 Uniprot:O93614
Length = 607
Score = 102 (41.0 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 38/141 (26%), Positives = 61/141 (43%)
Query: 86 MPLFISILRSGTPLAKVNVAATLSVLCKDEDLRLKVLLGGCIPPLLSLLKSESTDTRKAA 145
+ LF SIL S + A VA ++ + K+E +R+ + G IPPL+ LL S+ +
Sbjct: 51 LQLFASILNSQSSCAS-KVAHIVAEIAKNELMRIPCVEAGLIPPLVQLLHSKDQEVLLQT 109
Query: 146 AEALYEVSSGGLSDDHVGMKIFVTEGVVPTLWDQLNPK-NKQDNVVQGFVT---GALRNL 201
AL + D+H G + EG + D L D + +T G L N
Sbjct: 110 GRALGNICY----DNHEGRRAVDQEGGAQIVVDHLRSMCTLTDPSSEKLMTVFCGMLMNY 165
Query: 202 CGDKDGYWRATLEAGGVDIIV 222
+ D ++ G + I+V
Sbjct: 166 SSENDSLQTQLIQMGVIPILV 186
Score = 82 (33.9 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 64/304 (21%), Positives = 127/304 (41%)
Query: 1694 ESTITVALNALLIHERTDASSAEQMTQAGVIDALLDLLRSHQCEETSGRLLE-ALFNNGR 1752
E +TV L+ + + S Q+ Q GVI L+DLL H + T+ L E L G
Sbjct: 152 EKLMTVFCGMLMNYSSENDSLQTQLIQMGVIPILVDLLGVHS-QNTA--LTEMCLVAFGN 208
Query: 1753 IRQMKVSK--YA---IAPLSQYLLDPQTRSESGKXXXXXXXGDLSQHEGLXXXXXXXXXX 1807
+ +++ SK +A IA L QT E + L++++ +
Sbjct: 209 LAELESSKEQFAGTNIAEEIVKLFKKQTEHEK-REIIFEVLAPLAENDAIKMQLVEAGLV 267
Query: 1808 XXLISLLE-----DQSTDEMKMVAICALQNFVMCSRTNRRAVAEAGGILVVQELL--LST 1860
L+ +++ ++ D ++ L ++ + + + E G V Q +L L +
Sbjct: 268 ECLLDVVQQTVNSEKDDDIAELKTSSDLMVLLLLGDESMQKLFEGGKGSVFQRVLSWLPS 327
Query: 1861 N---AEVAGQAALLTKFLFSNHTLQEYVSNELIRSLTAALERELWS-TATINE---EVLR 1913
N ++AG A+ F ++ V +E+++ L L+R + T+ LR
Sbjct: 328 NNHQLQLAGALAI-ANFARNDGNCIHMVDSEIVQKLLDLLDRHVEDGNVTVQHAALSALR 386
Query: 1914 TLHVIFMNFPKLHTSEAATLCIPHLVGALKSGSEAAQGSVLDTLCLLRNSWSTMPIDVAK 1973
L + +N K+ ++ A ++ L+S Q +L TL +L ++ + + K
Sbjct: 387 NLAIPVVNKAKMLSAGVAE----EVLKFLRSEMPPVQFKLLGTLRMLIDAQAEAAEQIGK 442
Query: 1974 SQAM 1977
++ +
Sbjct: 443 NEKL 446
Score = 80 (33.2 bits), Expect = 0.00032, Sum P(2) = 0.00032
Identities = 51/228 (22%), Positives = 101/228 (44%)
Query: 1394 LISLM--QSDLSIVVESAVCAFERLLDDEQQVELVEGYDVVDLLVRLVSG-TNHRLVEAT 1450
L+ L+ S + + E + AF L + E E G ++ + +V+L T H E
Sbjct: 185 LVDLLGVHSQNTALTEMCLVAFGNLAELESSKEQFAGTNIAEEIVKLFKKQTEHEKREII 244
Query: 1451 VCALIKLGKDRTPRKLQMVKAGIIDNCLDLLP-VAPSALCSTIAELFRILTNSSAIARSS 1509
L L ++ K+Q+V+AG+++ LD++ S IAEL T+S +
Sbjct: 245 FEVLAPLAENDAI-KMQLVEAGLVECLLDVVQQTVNSEKDDDIAEL---KTSSDLMVLLL 300
Query: 1510 DAAKIVEPLFMVLLQPDFSLWGQHSALQALVNILEKPQSLVTLKLTPSQVIEPLLSFLES 1569
+ ++ LF G+ S Q +++ L P + L+L + I +F +
Sbjct: 301 LGDESMQKLFE---------GGKGSVFQRVLSWL--PSNNHQLQLAGALAIA---NFARN 346
Query: 1570 PSHAIQQLGTELLTHLL--AQEHFQQ-DITTKNAVVPLVQLAGIGILN 1614
+ I + +E++ LL H + ++T ++A + ++ I ++N
Sbjct: 347 DGNCIHMVDSEIVQKLLDLLDRHVEDGNVTVQHAALSALRNLAIPVVN 394
>UNIPROTKB|Q7Z5J8 [details] [associations]
symbol:ANKAR "Ankyrin and armadillo repeat-containing
protein" species:9606 "Homo sapiens" [GO:0016021 "integral to
membrane" evidence=IEA] InterPro:IPR000225 InterPro:IPR002110
InterPro:IPR016024 Pfam:PF00023 Pfam:PF00514 PROSITE:PS50088
PROSITE:PS50176 SMART:SM00185 SMART:SM00248 GO:GO:0016021
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 EMBL:AK126073 EMBL:AC012488 EMBL:AC013468
EMBL:BC044907 EMBL:BC047413 EMBL:AJ549812 IPI:IPI00374192
IPI:IPI00845277 IPI:IPI00845337 IPI:IPI00845352 RefSeq:NP_653309.3
UniGene:Hs.60772 UniGene:Hs.655700 ProteinModelPortal:Q7Z5J8
SMR:Q7Z5J8 IntAct:Q7Z5J8 STRING:Q7Z5J8 PhosphoSite:Q7Z5J8
DMDM:308153635 PRIDE:Q7Z5J8 Ensembl:ENST00000281412
Ensembl:ENST00000313581 Ensembl:ENST00000438402
Ensembl:ENST00000441800 Ensembl:ENST00000520309 GeneID:150709
KEGG:hsa:150709 UCSC:uc002uqw.2 CTD:150709 GeneCards:GC02P190539
H-InvDB:HIX0002670 HGNC:HGNC:26350 HPA:HPA036168 MIM:609803
neXtProt:NX_Q7Z5J8 PharmGKB:PA145149868 eggNOG:NOG116057
HOGENOM:HOG000007170 HOVERGEN:HBG106658 InParanoid:Q7Z5J8
OMA:HGGIEFD GenomeRNAi:150709 NextBio:86508 ArrayExpress:Q7Z5J8
Bgee:Q7Z5J8 CleanEx:HS_ANKAR Genevestigator:Q7Z5J8 Uniprot:Q7Z5J8
Length = 1434
Score = 135 (52.6 bits), Expect = 0.00025, P = 0.00025
Identities = 68/287 (23%), Positives = 127/287 (44%)
Query: 521 LVQLLEAGSQKAREVAAHVLWILCCHSEDIRACVESAGAVPAFLWLLKSGGPKGQDASAM 580
LV++L+ S K R +A L ++C ++ C+ AG +PA + LLKS K Q +
Sbjct: 705 LVEMLQCESYKRRMMAVMSLEVICLANDQYWRCILDAGTIPALINLLKSSKIKLQCKTVG 764
Query: 581 ALTKL------IRA-ADSATINQLLALLLGDSPSSKAHVIKVLGHVLTMALQEDLVQKGS 633
L+ + + A ++ I L+ LL+ D P + +L + + +D++ K +
Sbjct: 765 LLSNISTHKSAVHALVEAGGIPSLINLLVCDEPEVHSRCAVIL-YDIAQCENKDVIAKYN 823
Query: 634 AANKGLRSLVQVLNSSNEENQEYAASVLADLFSMRQDIC-GSLATDEIVN-----PCM-R 686
G+ SL+ +LN N EN VL ++ + + +C G+ V P + R
Sbjct: 824 ----GIPSLINLLNL-NIEN------VLVNVMNCIRVLCIGNENNQRAVREHKGLPYLIR 872
Query: 687 LLTSNTQMVATQSARALGALSRPTKTKTTNKMSYIAEGDVKPLIKLAKTSSIDXXXXXXX 746
L+S++ ++ S+ A+ + R K + + ++ EG + PL+ L K I
Sbjct: 873 FLSSDSDVLKAVSSAAIAEVGRDNK-EIQDAIAM--EGAIPPLVALFKGKQISVQMKGAM 929
Query: 747 XXXXXXSDPDIAAEVLLE-DVVSALTRVLAEGTSEGKKNASRALHQL 792
S + + LE + L ++L + K+ + AL L
Sbjct: 930 AVESLASHNALIQKAFLEKSLTKYLLKLLKAFQIDVKEQGAVALWAL 976
>TAIR|locus:2162276 [details] [associations]
symbol:PUB15 "Plant U-Box 15" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0006944 "cellular membrane
fusion" evidence=RCA] [GO:0030048 "actin filament-based movement"
evidence=RCA] [GO:0048610 "cellular process involved in
reproduction" evidence=RCA] [GO:0048868 "pollen tube development"
evidence=RCA] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176
SMART:SM00185 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 EMBL:AB016888 GO:GO:0000151 HOGENOM:HOG000238412
HSSP:Q8VZ40 EMBL:AK175585 IPI:IPI00547462 RefSeq:NP_199049.2
UniGene:At.51075 ProteinModelPortal:Q681N2 SMR:Q681N2 PaxDb:Q681N2
PRIDE:Q681N2 EnsemblPlants:AT5G42340.1 GeneID:834240
KEGG:ath:AT5G42340 TAIR:At5g42340 eggNOG:NOG263115
InParanoid:Q681N2 OMA:CCHDGSK PhylomeDB:Q681N2
ProtClustDB:CLSN2681658 Genevestigator:Q681N2 Uniprot:Q681N2
Length = 660
Score = 131 (51.2 bits), Expect = 0.00026, P = 0.00026
Identities = 56/221 (25%), Positives = 102/221 (46%)
Query: 491 QEYAVQLIAILTEQVDD-SKWAITAAGGIPPLVQLLEAGSQKAREVAAHVLWILCCHSED 549
QE AV +L +D+ +K I+ G IP ++++LE G+++ARE +A L+ L E+
Sbjct: 438 QENAVT--TLLNLSIDEVNKKLISNEGAIPNIIEILENGNREARENSAAALFSLSMLDEN 495
Query: 550 IRACVESAGAVPAFLWLLKSGGPKGQDASAMALTKLI-------RAADSATINQLLALLL 602
+ + + +P + LL+ G +G+ + AL L RA D+ + LL LL
Sbjct: 496 -KVTIGLSNGIPPLVDLLQHGTLRGKKDALTALFNLSLNSANKGRAIDAGIVQPLLNLL- 553
Query: 603 GDSPSSKAHVIKVLGHVLTMALQEDLVQKGSAANKGLRSLVQVLNSSNEENQEYAASVLA 662
+ + + L +L +A + ++ + +LV+ + +N+E A SVL
Sbjct: 554 --KDKNLGMIDEALSILLLLASHPE-GRQAIGQLSFIETLVEFIRQGTPKNKECATSVLL 610
Query: 663 DLFSMRQDICGSLATDEIVNPCMRLLTSNTQMVATQSARAL 703
+L S + + + + TS T A + A AL
Sbjct: 611 ELGSNNSSFILAALQFGVYEYLVEITTSGTNR-AQRKANAL 650
Score = 116 (45.9 bits), Expect = 0.00036, Sum P(2) = 0.00036
Identities = 42/149 (28%), Positives = 74/149 (49%)
Query: 32 DDPESTMSTVAKFLEQLHANMSSPQERELITMRILTIAKAKKEARLLIGSHAQAMPLFIS 91
D V+ +E L ++ Q R + MR+L A+ E R+LI ++A A+PL +
Sbjct: 372 DSQNEQKDEVSLLVEALSSSQLEEQRRSVKQMRLL--ARENPENRVLI-ANAGAIPLLVQ 428
Query: 92 ILRSGTPLAKVNVAATLSVLCKDEDLRLKVLLGGCIPPLLSLLKSESTDTRKAAAEALYE 151
+L + N TL L DE + + G IP ++ +L++ + + R+ +A AL+
Sbjct: 429 LLSYPDSGIQENAVTTLLNLSIDEVNKKLISNEGAIPNIIEILENGNREARENSAAALFS 488
Query: 152 VSSGGLSDDHVGMKIFVTEGVVPTLWDQL 180
+S L ++ V I ++ G+ P L D L
Sbjct: 489 LSM--LDENKV--TIGLSNGI-PPLVDLL 512
Score = 66 (28.3 bits), Expect = 0.00036, Sum P(2) = 0.00036
Identities = 24/150 (16%), Positives = 63/150 (42%)
Query: 1356 LSSNSSLELKRNAAELCFIMFGNAKIIANPIASECIQPLISLMQSDLSIVVESAVCAFER 1415
L + +L K++A F + N+ I + +QPL++L++ +++ A+
Sbjct: 511 LLQHGTLRGKKDALTALFNLSLNSANKGRAIDAGIVQPLLNLLKDKNLGMIDEALSILLL 570
Query: 1416 LLDDEQQVELVEGYDVVDLLVRLVSGTNHRLVEATVCALIKLGKDRTPRKLQMVKAGIID 1475
L + + + ++ LV + + E L++LG + + L ++ G+ +
Sbjct: 571 LASHPEGRQAIGQLSFIETLVEFIRQGTPKNKECATSVLLELGSNNSSFILAALQFGVYE 630
Query: 1476 NCLDLLPVAPSALCSTIAELFRILTNSSAI 1505
+++ + L ++++ S I
Sbjct: 631 YLVEITTSGTNRAQRKANALIQLISKSEQI 660
>TAIR|locus:2013990 [details] [associations]
symbol:AT1G71020 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0005871 "kinesin complex" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0019894
"kinesin binding" evidence=IEA] InterPro:IPR000225
InterPro:IPR003613 InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564
PROSITE:PS50176 SMART:SM00185 SMART:SM00504 UniPathway:UPA00143
EMBL:CP002684 GenomeReviews:CT485782_GR SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 EMBL:AC016972
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151
EMBL:AC008148 HOGENOM:HOG000238412 EMBL:AY075626 EMBL:AY142062
EMBL:AK220971 IPI:IPI00534706 PIR:E96734 RefSeq:NP_177258.3
UniGene:At.43068 HSSP:Q8VZ40 ProteinModelPortal:Q9C9A6 SMR:Q9C9A6
IntAct:Q9C9A6 PaxDb:Q9C9A6 PRIDE:Q9C9A6 EnsemblPlants:AT1G71020.1
GeneID:843442 KEGG:ath:AT1G71020 TAIR:At1g71020 eggNOG:NOG261082
InParanoid:Q9C9A6 OMA:FQARESS PhylomeDB:Q9C9A6
ProtClustDB:CLSN2681864 Genevestigator:Q9C9A6 Uniprot:Q9C9A6
Length = 628
Score = 145 (56.1 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 64/230 (27%), Positives = 105/230 (45%)
Query: 491 QEYAVQLIAILTEQVDDSKWAITAAGGIPPLVQLLEAGSQKAREVAAHVLWILCCHSEDI 550
QE AV I L+ + +K I AG + +V +L AGS +ARE AA L+ L E+
Sbjct: 401 QENAVTCILNLSIY-EHNKELIMLAGAVTSIVLVLRAGSMEARENAAATLFSLSLADEN- 458
Query: 551 RACVESAGAVPAFLWLLKSGGPKGQDASAMALTKLI-------RAADSATINQLLALLLG 603
+ + ++GA+ A + LL+ G +G+ +A AL L RA + + L+ +L
Sbjct: 459 KIIIGASGAIMALVDLLQYGSVRGKKDAATALFNLCIYQGNKGRAVRAGIVKPLVKMLT- 517
Query: 604 DSPSSKAHVIKVLGHVLTMALQEDLVQKGSAANKGLRSLVQVLNSSNEENQEYAASVLAD 663
DS SS+ + L +L++ + + + L+ L N+E AA++L
Sbjct: 518 DS-SSERMADEALT-ILSVLASNQVAKTAILRANAIPPLIDCLQKDQPRNRENAAAILLC 575
Query: 664 LFSMRQDICGSLATDEIVNPCMRLLTSNTQMVATQSARALGALSRPTKTK 713
L + S+ V P M L T+ A + A +L L R + K
Sbjct: 576 LCKRDTEKLISIGRLGAVVPLMELSRDGTER-AKRKANSLLELLRKSSRK 624
Score = 37 (18.1 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 8/53 (15%), Positives = 26/53 (49%)
Query: 378 KSGVDDEPFDARQIEDILVM--LLKPHDNKLVQERVLEAMASLYGNIFLSQWV 428
+ V + D+++ +++ + L P +L+++ + + Y F+ +W+
Sbjct: 225 EKAVTENSDDSQKSDNLTIPEDFLCPISLELMKDPAIVSTGQTYERSFIQRWI 277
>DICTYBASE|DDB_G0270626 [details] [associations]
symbol:armc8 "armadillo repeat-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR000225 InterPro:IPR016024 Pfam:PF00514
PROSITE:PS50176 SMART:SM00185 dictyBase:DDB_G0270626
EMBL:AAFI02000005 GenomeReviews:CM000150_GR SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 eggNOG:COG5369
RefSeq:XP_646234.2 ProteinModelPortal:Q55D97
EnsemblProtists:DDB0238296 GeneID:8617190 KEGG:ddi:DDB_G0270626
OMA:IEEPGHV Uniprot:Q55D97
Length = 702
Score = 118 (46.6 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 54/219 (24%), Positives = 96/219 (43%)
Query: 1330 LTSGNTSKACLLTDIDGNLLESLYKILSSNSSLELKRNAAELCFIMFGNAKIIANPIASE 1389
LT N + + + + +L+ + + N S ++K A C F +K + + +
Sbjct: 264 LTRDNVPLSTFIVNDERRILDIIIYLFKKNKSPKIKLLATN-CLCNFNQSKTLPITCSLK 322
Query: 1390 CIQPLISLMQSDLSIVVESAVCAFERLLDDEQQVELV--EGYDVVDLLVRLV-SGTNHRL 1446
I P+I + S+ V E A RL+ D + ++ + E + L + L S ++ RL
Sbjct: 323 NILPIIIRLMSEEESVKEEAPMVLARLVADNEDLQRIASEAEAISRLSIFLKDSNSSERL 382
Query: 1447 VEATVCALIKLGKDRTPRKLQMVKAGIIDNCLDLLPVAPSALCSTIAELFRILTNSSAIA 1506
E ++ A+ L R + Q+V A II + L + A+ + + L+ S
Sbjct: 383 KENSLSAIAVLCSSREDSRKQVVDAKIIPQIISSLNSSNYAIRAAACNCTKSLSRSIKQL 442
Query: 1507 RSS--DAAKIVEPLFMVLLQPDFSLWGQHSALQALVNIL 1543
R+S D I PL +L D SL + SA L N++
Sbjct: 443 RTSLFDCT-IATPLLKLL--DDQSLEVRVSASATLCNLV 478
Score = 66 (28.3 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 31/92 (33%), Positives = 40/92 (43%)
Query: 643 VQVLNSSNEENQEYAASVLADLFSMRQDICGSLATDEI--VNPCMRLLTSNTQMVATQSA 700
V +LN E+ AS + F R D GS E V P + LL+SN + +A
Sbjct: 64 VDILNKEKNEDLLIQASSVIGSFGCRIDE-GSEKIFEYNGVTPLINLLSSNNLKLVESAA 122
Query: 701 RALGALSRPTKTKTTNKMSYIAEGDVKPLIKL 732
R+L LS + T S E VK LI L
Sbjct: 123 RSLKILSLFHQPPT----SIYEESGVKLLISL 150
>UNIPROTKB|Q5PPZ9 [details] [associations]
symbol:rap1gds1-b "Rap1 GTPase-GDP dissociation stimulator
1-B" species:8355 "Xenopus laevis" [GO:0005575 "cellular_component"
evidence=ND] [GO:0007264 "small GTPase mediated signal
transduction" evidence=ISS] [GO:0017160 "Ral GTPase binding"
evidence=ISS] [GO:0043547 "positive regulation of GTPase activity"
evidence=ISS] InterPro:IPR000225 InterPro:IPR016024 Pfam:PF00514
PROSITE:PS50176 SMART:SM00185 GO:GO:0005737 GO:GO:0007264
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0005856
GO:GO:0005096 GO:GO:0043547 GO:GO:0017160 HOVERGEN:HBG001622
EMBL:BC087423 RefSeq:NP_001088766.1 UniGene:Xl.48748
ProteinModelPortal:Q5PPZ9 GeneID:496030 KEGG:xla:496030 CTD:496030
Xenbase:XB-GENE-6252826 Uniprot:Q5PPZ9
Length = 607
Score = 98 (39.6 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 37/141 (26%), Positives = 61/141 (43%)
Query: 86 MPLFISILRSGTPLAKVNVAATLSVLCKDEDLRLKVLLGGCIPPLLSLLKSESTDTRKAA 145
+ LF SIL S + A VA ++ + K+E +R+ + IPPL+ LL S+ +
Sbjct: 51 LQLFASILNSQSSCAS-KVAHIVAEIAKNELMRIPCVEADLIPPLVQLLHSKDQEVLLQT 109
Query: 146 AEALYEVSSGGLSDDHVGMKIFVTEGVVPTLWDQLNPK-NKQDNVVQGFVT---GALRNL 201
AL + D+H G + EG + D L + D + +T G L N
Sbjct: 110 GRALGNICY----DNHEGRRTVDQEGGAQIVVDHLRSRCTLTDPSSEKLMTVFCGMLMNY 165
Query: 202 CGDKDGYWRATLEAGGVDIIV 222
+ D ++ G + I+V
Sbjct: 166 SSENDSLQTQLIQMGVIPILV 186
Score = 85 (35.0 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 64/305 (20%), Positives = 127/305 (41%)
Query: 1694 ESTITVALNALLIHERTDASSAEQMTQAGVIDALLDLLRSHQCEETSGRLLE-ALFNNGR 1752
E +TV L+ + + S Q+ Q GVI L+DLL H + T+ L E L G
Sbjct: 152 EKLMTVFCGMLMNYSSENDSLQTQLIQMGVIPILVDLLAVHS-QNTA--LTEMCLVAFGN 208
Query: 1753 IRQMKVSK--YA---IAPLSQYLLDPQTRSESGKXXXXXXXGDLSQHEGLXXXXXXXXXX 1807
+ +++ SK +A +A + L QT E + L++++ +
Sbjct: 209 LAELESSKEQFAATNVAEVIVKLFKKQTEHEK-REVIFEVLAPLAENDAIKMQLVEAGLV 267
Query: 1808 XXLISLLE-----DQSTDEMKMVAICALQNFVMCSRTNRRAVAEAGGILVVQELL--LST 1860
L+ +++ ++ D ++ L ++ + + + E G V Q +L L +
Sbjct: 268 ECLLDIVQQTVNSEKDDDVAELKTSSDLMVLLLLGDESMQKLFEGGKGSVFQRVLSWLPS 327
Query: 1861 N---AEVAGQAALLTKFLFSNHTLQEYVSNELIRSLTAALERELWS-TATINE---EVLR 1913
N ++AG A+ F ++ V +E+++ L L+R + T+ LR
Sbjct: 328 NNHQLQLAGALAI-ANFARNDGNCIHMVDSEIVQKLLDLLDRHVEDGNVTVQHAALSALR 386
Query: 1914 TLHVIFMNFPKLHTSEAATLCIPHLVGALKSGSEAAQGSVLDTLCLLRNSWSTMPIDVAK 1973
L + +N K+ S T ++ L S Q +L TL +L ++ + + K
Sbjct: 387 NLAIPVVNKAKM-LSAGVT---EEVLKFLPSEMPPVQFKLLGTLRMLIDAQAEAAEQLGK 442
Query: 1974 SQAMI 1978
++ ++
Sbjct: 443 NEKLV 447
>TAIR|locus:2100372 [details] [associations]
symbol:PUB39 "PLANT U-BOX 39" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005871 "kinesin complex" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0019894 "kinesin binding"
evidence=IEA] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176 SMART:SM00185
SMART:SM00504 UniPathway:UPA00143 EMBL:CP002686
GenomeReviews:BA000014_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 EMBL:AL049746 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 HSSP:Q8VZ40
HOGENOM:HOG000239874 ProtClustDB:CLSN2719312 EMBL:AY091018
EMBL:BT020355 IPI:IPI00534988 PIR:T07721 RefSeq:NP_190366.1
UniGene:At.35768 ProteinModelPortal:Q9STT1 SMR:Q9STT1 PaxDb:Q9STT1
PRIDE:Q9STT1 EnsemblPlants:AT3G47820.1 GeneID:823936
KEGG:ath:AT3G47820 TAIR:At3g47820 eggNOG:NOG271898
InParanoid:Q9STT1 OMA:ARENCVG PhylomeDB:Q9STT1
Genevestigator:Q9STT1 Uniprot:Q9STT1
Length = 509
Score = 92 (37.4 bits), Expect = 0.00028, Sum P(2) = 0.00028
Identities = 48/189 (25%), Positives = 90/189 (47%)
Query: 491 QEYAVQLIAILTEQVDDSKWAITAAGGIPPLVQLLEAG-SQKAREVAAHVLWILCCHSED 549
QE+ + + L + +++K I G + PL+ L + S++AR+ AA L+ L +
Sbjct: 283 QEHVIGALFSLAVE-EENKMVIGVLGAVEPLLHALRSSESERARQDAALALYHLSLIPNN 341
Query: 550 IRACVESAGAVPAFLWLLKSGGPKGQDASAMALTKLIRAA---------DSATINQLLAL 600
R+ + AGAVP L +++SG + AS + L AA D ++ L+
Sbjct: 342 -RSRLVKAGAVPMMLSMIRSG----ESASRILLLLCNLAACSEGKGAMLDGNAVSILVGK 396
Query: 601 LL--GDSPSSKAHVIKVLGHVLTMALQEDLVQKGSAANKGLRS-LVQVLNSSNEENQ--E 655
L G + S A +G +LT+++ ++ +G A+ G L +++ S + + E
Sbjct: 397 LRESGGAESDAAARENCVGALLTLSVG-NMRFRGLASEAGAEEILTEIVESESGSGRLKE 455
Query: 656 YAASVLADL 664
A+ +L L
Sbjct: 456 KASKILQTL 464
Score = 89 (36.4 bits), Expect = 0.00028, Sum P(2) = 0.00028
Identities = 25/97 (25%), Positives = 55/97 (56%)
Query: 57 ERELITMRILTIAKAKKEARLLIGSHAQAMPLFISILRSGTPLAKVNVAATLSVLCKDED 116
E+ LI +R T ++ + R+ + + + + L S++ S + + N AA++ L ++
Sbjct: 201 EQGLIQLRKTT--RSNETTRISLCTD-RILSLLRSLIVSRYNIVQTNAAASIVNLSLEKP 257
Query: 117 LRLKVLLGGCIPPLLSLLKSESTDTRKAAAEALYEVS 153
+LK++ G +P L+ +LKS ST+ ++ AL+ ++
Sbjct: 258 NKLKIVRSGFVPLLIDVLKSGSTEAQEHVIGALFSLA 294
>RGD|1306655 [details] [associations]
symbol:Arvcf "armadillo repeat gene deleted in
velo-cardio-facial syndrome" species:10116 "Rattus norvegicus"
[GO:0005634 "nucleus" evidence=ISO] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005886 "plasma membrane" evidence=ISO]
InterPro:IPR000225 InterPro:IPR016024 Pfam:PF00514 PROSITE:PS50176
SMART:SM00185 RGD:1306655 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 IPI:IPI00566415 ProteinModelPortal:D4AC68
Ensembl:ENSRNOT00000040586 ArrayExpress:D4AC68 Uniprot:D4AC68
Length = 898
Score = 105 (42.0 bits), Expect = 0.00032, Sum P(2) = 0.00032
Identities = 39/118 (33%), Positives = 61/118 (51%)
Query: 86 MPLFISILRSGTPLAKVNVAATLSVLC-KDEDLRLKVL-LGGCIPPLLSLLKSESTDTRK 143
+P +++LR K N AA L LC ++E ++ +V L G +P L++LL + R+
Sbjct: 297 LPEVLAMLRHPVDPVKANAAAYLQHLCFENEGIKRRVRQLRG-LPLLVALLDHPRAEVRR 355
Query: 144 AAAEALYEVSSGGLSDDHVGMKIFVTEGVVPTLWDQLNPKNKQDNVVQGFVTGALRNL 201
A AL +S G +D+ ++ G VP L L + +DN V+ VTG L NL
Sbjct: 356 RACGALRNLSYGRDADNKAAIRDC---GGVPALVRLL--RAARDNEVRELVTGTLWNL 408
Score = 81 (33.6 bits), Expect = 0.00032, Sum P(2) = 0.00032
Identities = 26/78 (33%), Positives = 44/78 (56%)
Query: 500 ILTEQVDDSKWAITAAGGIPPLVQLLEAGSQKAREV--AAHVLWILCCHSEDIRACVESA 557
I+++ +D+++ ++ A G+P LV L+ A SQ RE A+HVL + + E +R ++
Sbjct: 723 IVSDSLDNAR-SLLQARGVPALVALV-ASSQSVREAKAASHVLQTVWSYKE-LRGALQRD 779
Query: 558 GAVPA-FLWLLKSGGPKG 574
G A F + GPKG
Sbjct: 780 GWTKAHFQSASTAKGPKG 797
>UNIPROTKB|E1C8F9 [details] [associations]
symbol:E1C8F9 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030117 "membrane coat" evidence=IEA]
InterPro:IPR000225 InterPro:IPR002553 InterPro:IPR016024
Pfam:PF00514 Pfam:PF01602 PROSITE:PS50176 SMART:SM00185
GO:GO:0006886 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0030117 GO:GO:0016192 GeneTree:ENSGT00680000099702
OMA:LTNMAMQ InterPro:IPR026840 Pfam:PF14381 EMBL:AADN02000591
EMBL:AADN02000592 IPI:IPI00589277 Ensembl:ENSGALT00000012763
Uniprot:E1C8F9
Length = 876
Score = 118 (46.6 bits), Expect = 0.00035, Sum P(2) = 0.00035
Identities = 77/344 (22%), Positives = 135/344 (39%)
Query: 492 EYAV-QLIAILTEQV--DDSKWAITAAG--GIPPLVQLLEAGSQKAREVAAHVLWILCCH 546
EY V QL+A+ T +V D + I G+ L+++LE V A + C
Sbjct: 203 EYPVIQLLALKTLEVISKDREMRIILGENEGLDCLLKILETNEFNDLHVEALAVLGNCLE 262
Query: 547 SEDIRACVESAGAVPAFLWLLK-SGGPKGQDASAMALTKLIRAADSATI-NQ------LL 598
+ G + L + S P Q +A A+ K +++ I N+ L+
Sbjct: 263 DVHTMQLIRQTGGLKKLLSFVGVSTVPDIQKNAAKAIAKAASDSENRKILNEEDVESCLI 322
Query: 599 ALLLGDSPSSKAHVIKVLGHVLTMALQEDLVQKGSAANKGLRSLVQVLNSSNEENQEYAA 658
LL D +KV A+ E+L K + +G+ LVQ+L+S +EE +E A
Sbjct: 323 NLLEIDDDG-----VKVAASQAISAMCENLASKRAFGLQGIPQLVQLLSSDDEEVKEAAV 377
Query: 659 SVLADLFSMRQDICGSLATDEIVNPCMRLLTSNTQMVATQSARALG--ALSRPTKTKTTN 716
LA+L + ++A E + P ++ L + +A L A+ P +
Sbjct: 378 IALANLTTASPSNASAVAEAEGIEPLVKSLNAERHGAVANAATVLTNMAMQEPLR----- 432
Query: 717 KMSYIAEGDVKPLIKLAKTSSIDXXXXXXXXXXXXXSDPDIAAEVLLEDVVSALTRVLAE 776
+S + G + L + ++SS D + +E+ + L +L
Sbjct: 433 -LSIQSHGVMSVLTEPLRSSSSQVQSRAALTVAAFGCDANARSELRNAGGLGPLVELLHS 491
Query: 777 GTSEGKKNASRALHQLLKHFPVGDVLKGNAQCRFVVLTLVDSLN 820
E ++NA A+ D L CR L +++ +N
Sbjct: 492 KDKEVRRNACWAVMVC-----ASDELTAVELCRLGALDILEEIN 530
Score = 67 (28.6 bits), Expect = 0.00035, Sum P(2) = 0.00035
Identities = 24/67 (35%), Positives = 32/67 (47%)
Query: 87 PLFISILRSGTPLAKVNVAATLSVLCKDEDLRLKVLLGGCIPPLLSLLKSESTDTRKAAA 146
PL IS+L S P N + +L ++ R V IPPLL LLKSE + A
Sbjct: 154 PL-ISLLGSPDPDVTKNSVECIYLLVQEFQSRAAVCELNVIPPLLDLLKSEYPVIQLLAL 212
Query: 147 EALYEVS 153
+ L +S
Sbjct: 213 KTLEVIS 219
>MGI|MGI:109620 [details] [associations]
symbol:Arvcf "armadillo repeat gene deleted in
velo-cardio-facial syndrome" species:10090 "Mus musculus"
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005886
"plasma membrane" evidence=IDA] [GO:0007155 "cell adhesion"
evidence=IEA] [GO:0016339 "calcium-dependent cell-cell adhesion"
evidence=TAS] InterPro:IPR000225 InterPro:IPR016024 Pfam:PF00514
PROSITE:PS50176 SMART:SM00185 MGI:MGI:109620 GO:GO:0005886
GO:GO:0005634 GO:GO:0005737 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0016339 CTD:421 eggNOG:NOG276924
HOVERGEN:HBG004284 OMA:TYIRATV OrthoDB:EOG4F1X2D EMBL:AF286212
EMBL:AF286213 EMBL:AF286214 EMBL:AF286215 EMBL:AK044982
EMBL:AK051627 EMBL:AK084886 EMBL:BC056980 EMBL:AJ243418
IPI:IPI00127472 IPI:IPI00420926 IPI:IPI00620282 IPI:IPI00621122
IPI:IPI00625693 RefSeq:NP_001258957.1 RefSeq:NP_001258958.1
RefSeq:NP_001258959.1 RefSeq:NP_001258960.1 RefSeq:NP_001258961.1
RefSeq:NP_258435.2 UniGene:Mm.293599 ProteinModelPortal:P98203
SMR:P98203 STRING:P98203 PhosphoSite:P98203 PaxDb:P98203
PRIDE:P98203 Ensembl:ENSMUST00000090103 Ensembl:ENSMUST00000115610
Ensembl:ENSMUST00000115612 Ensembl:ENSMUST00000115613
Ensembl:ENSMUST00000115614 GeneID:11877 KEGG:mmu:11877
UCSC:uc007ynl.1 UCSC:uc007ynm.1 UCSC:uc007ynq.1 UCSC:uc007yns.1
GeneTree:ENSGT00690000101851 NextBio:279903 Bgee:P98203
Genevestigator:P98203 GermOnline:ENSMUSG00000000325 Uniprot:P98203
Length = 962
Score = 105 (42.0 bits), Expect = 0.00035, Sum P(3) = 0.00035
Identities = 39/118 (33%), Positives = 61/118 (51%)
Query: 86 MPLFISILRSGTPLAKVNVAATLSVLC-KDEDLRLKVL-LGGCIPPLLSLLKSESTDTRK 143
+P +++LR K N AA L LC ++E ++ +V L G +P L++LL + R+
Sbjct: 362 LPEVLAMLRHPVDPVKANAAAYLQHLCFENEGIKRRVRQLRG-LPLLVALLDHPRAEVRR 420
Query: 144 AAAEALYEVSSGGLSDDHVGMKIFVTEGVVPTLWDQLNPKNKQDNVVQGFVTGALRNL 201
A AL +S G +D+ ++ G VP L L + +DN V+ VTG L NL
Sbjct: 421 RACGALRNLSYGRDTDNKAAIRDC---GGVPALVRLL--RAARDNEVRELVTGTLWNL 473
Score = 81 (33.6 bits), Expect = 0.00035, Sum P(3) = 0.00035
Identities = 26/82 (31%), Positives = 46/82 (56%)
Query: 500 ILTEQVDDSKWAITAAGGIPPLVQLLEAGSQKAREV--AAHVLWILCCHSEDIRACVESA 557
I+++ +D+++ ++ A G+P LV L+ A SQ RE A+HVL + + E +R ++
Sbjct: 787 IVSDSLDNAR-SLLQARGVPALVALV-ASSQSVREAKAASHVLQTVWSYKE-LRGALQRD 843
Query: 558 GAVPA-FLWLLKSGGPKGQDAS 578
G + F + GPKG +S
Sbjct: 844 GWTKSRFQSASTAKGPKGTPSS 865
Score = 49 (22.3 bits), Expect = 0.00035, Sum P(3) = 0.00035
Identities = 12/30 (40%), Positives = 16/30 (53%)
Query: 1183 DILRPIPDRPGAPPVAVRLLTQIVDG-SDT 1211
++LRP P R PP R ++VD DT
Sbjct: 924 ELLRPDPGRKAPPPGPSRPSVRLVDAVGDT 953
>UNIPROTKB|O75923 [details] [associations]
symbol:DYSF "Dysferlin" species:9606 "Homo sapiens"
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0001778
"plasma membrane repair" evidence=IEA] [GO:0006906 "vesicle fusion"
evidence=IEA] [GO:0030027 "lamellipodium" evidence=IEA] [GO:0030315
"T-tubule" evidence=IEA] [GO:0030659 "cytoplasmic vesicle membrane"
evidence=IEA] [GO:0005544 "calcium-dependent phospholipid binding"
evidence=IMP] [GO:0005886 "plasma membrane" evidence=TAS]
InterPro:IPR000008 InterPro:IPR006614 InterPro:IPR008973
InterPro:IPR012560 InterPro:IPR012561 Pfam:PF00168 Pfam:PF08150
Pfam:PF08165 SMART:SM00239 SMART:SM00693 SMART:SM00694
GO:GO:0016021 GO:GO:0005886 EMBL:CH471053 GO:GO:0030315
InterPro:IPR018029 SUPFAM:SSF49562 PROSITE:PS50004 GO:GO:0030659
Orphanet:45448 GO:GO:0005544 GO:GO:0006906 GO:GO:0001778 CTD:8291
eggNOG:NOG330124 HOVERGEN:HBG018972 InterPro:IPR012968
InterPro:IPR010482 Pfam:PF08151 Pfam:PF06398 EMBL:AF075575
EMBL:DQ267935 EMBL:EU515155 EMBL:EU515156 EMBL:EU515157
EMBL:EU515158 EMBL:EU515159 EMBL:EU515160 EMBL:EU515161
EMBL:EU515162 EMBL:EU515163 EMBL:EU515164 EMBL:EU515165
EMBL:EU515166 EMBL:AC010147 EMBL:AC104084 EMBL:DQ976379
EMBL:AJ007670 EMBL:AJ007973 EMBL:AK074104 EMBL:AK074649
IPI:IPI00020210 IPI:IPI00793867 IPI:IPI00871702 IPI:IPI00890768
IPI:IPI00890779 IPI:IPI00908443 IPI:IPI00908579 IPI:IPI00908658
IPI:IPI00908764 IPI:IPI00908826 IPI:IPI00908936 IPI:IPI00910445
IPI:IPI00910624 IPI:IPI00911101 IPI:IPI00915417
RefSeq:NP_001123927.1 RefSeq:NP_001124448.1 RefSeq:NP_001124449.1
RefSeq:NP_001124450.1 RefSeq:NP_001124451.1 RefSeq:NP_001124452.1
RefSeq:NP_001124453.1 RefSeq:NP_001124454.1 RefSeq:NP_001124455.1
RefSeq:NP_001124456.1 RefSeq:NP_001124457.1 RefSeq:NP_001124458.1
RefSeq:NP_001124459.1 RefSeq:NP_003485.1 UniGene:Hs.252180
ProteinModelPortal:O75923 SMR:O75923 IntAct:O75923 STRING:O75923
PhosphoSite:O75923 PaxDb:O75923 PRIDE:O75923
Ensembl:ENST00000258104 Ensembl:ENST00000394120
Ensembl:ENST00000409366 Ensembl:ENST00000409582
Ensembl:ENST00000409651 Ensembl:ENST00000409744
Ensembl:ENST00000409762 Ensembl:ENST00000410020
Ensembl:ENST00000410041 Ensembl:ENST00000413539
Ensembl:ENST00000429174 GeneID:8291 KEGG:hsa:8291 UCSC:uc002sie.3
UCSC:uc002sif.3 UCSC:uc002sig.4 UCSC:uc010fee.3 UCSC:uc010fef.3
UCSC:uc010feg.3 UCSC:uc010feh.3 UCSC:uc010fei.3 UCSC:uc010fej.3
UCSC:uc010fek.3 UCSC:uc010fel.3 UCSC:uc010fem.3 UCSC:uc010fen.3
UCSC:uc010feo.3 GeneCards:GC02P071680 HGNC:HGNC:3097 HPA:CAB002510
HPA:HPA017071 HPA:HPA021945 MIM:253601 MIM:254130 MIM:603009
MIM:606768 neXtProt:NX_O75923 Orphanet:268 Orphanet:199329
Orphanet:178400 PharmGKB:PA27554 OMA:KRHRQAE PhylomeDB:O75923
GenomeRNAi:8291 NextBio:31071 ArrayExpress:O75923 Bgee:O75923
Genevestigator:O75923 GermOnline:ENSG00000135636 Uniprot:O75923
Length = 2080
Score = 135 (52.6 bits), Expect = 0.00038, P = 0.00038
Identities = 29/106 (27%), Positives = 57/106 (53%)
Query: 2029 TNAFCRLTIGNGPPRQTKVVSHSISPEWKEGFTWAFD-VP-PKGQKLHIICKSKNTFGKS 2086
++A+C G ++TKV+ +S++P W EGF W +P +G +LH++ K T G++
Sbjct: 20 SDAYCSAVFA-GVKKRTKVIKNSVNPVWNEGFEWDLKGIPLDQGSELHVVVKDHETMGRN 78
Query: 2087 T-LGKVTIQIDKVVTEGVYSGLFNLNH-DNNKDSSSRTLEIEIIWS 2130
LG+ + + +V+ S FN D K + +L +++ ++
Sbjct: 79 RFLGEAKVPLREVLATPSLSASFNAPLLDTKKQPTGASLVLQVSYT 124
>UNIPROTKB|O00192 [details] [associations]
symbol:ARVCF "Armadillo repeat protein deleted in
velo-cardio-facial syndrome" species:9606 "Homo sapiens"
[GO:0007155 "cell adhesion" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005622 "intracellular" evidence=TAS] [GO:0007275
"multicellular organismal development" evidence=TAS]
InterPro:IPR000225 InterPro:IPR016024 Pfam:PF00514 PROSITE:PS50176
SMART:SM00185 GO:GO:0007275 GO:GO:0005886 GO:GO:0005634
GO:GO:0005737 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0007155 GO:GO:0005622 EMBL:U51269 EMBL:AC005663
IPI:IPI00010490 IPI:IPI00220492 RefSeq:NP_001661.1
UniGene:Hs.713616 ProteinModelPortal:O00192 SMR:O00192
STRING:O00192 PhosphoSite:O00192 PaxDb:O00192 PRIDE:O00192
DNASU:421 Ensembl:ENST00000263207 Ensembl:ENST00000344269
Ensembl:ENST00000401994 GeneID:421 KEGG:hsa:421 UCSC:uc002zqz.3
CTD:421 GeneCards:GC22M019957 HGNC:HGNC:728 HPA:CAB016162
MIM:602269 neXtProt:NX_O00192 Orphanet:567 PharmGKB:PA25018
eggNOG:NOG276924 HOGENOM:HOG000231862 HOVERGEN:HBG004284
InParanoid:O00192 OMA:TYIRATV OrthoDB:EOG4F1X2D PhylomeDB:O00192
ChiTaRS:ARVCF GenomeRNAi:421 NextBio:1779 ArrayExpress:O00192
Bgee:O00192 Genevestigator:O00192 GermOnline:ENSG00000099889
Uniprot:O00192
Length = 962
Score = 110 (43.8 bits), Expect = 0.00046, Sum P(2) = 0.00046
Identities = 56/207 (27%), Positives = 93/207 (44%)
Query: 7 PSPEPQAHGFSSTSQPRESNG--TSAMDDPESTMSTVAK---FLEQLHANMSSPQEREL- 60
P EP +G ++ +P G T A +D +A + A ++ P+ +
Sbjct: 276 PELEPD-YGTATRRRPECGRGLHTRAYEDTADDGGELADERPAFPMVTAPLAQPERGSMG 334
Query: 61 ----ITMRILTIAKAKKEARLLIGSHAQAMPLFISILRSGTPLAKVNVAATLSVLC-KDE 115
+ R ++ A+KE R +P +++LR K N AA L LC ++E
Sbjct: 335 SLDRLVRRSPSVDSARKEPRW----RDPELPEVLAMLRHPVDPVKANAAAYLQHLCFENE 390
Query: 116 DLRLKVL-LGGCIPPLLSLLKSESTDTRKAAAEALYEVSSGGLSDDHVGMKIFVTEGVVP 174
++ +V L G +P L++LL + R+ A AL +S G +D+ ++ G VP
Sbjct: 391 GVKRRVRQLRG-LPLLVALLDHPRAEVRRRACGALRNLSYGRDTDNKAAIRDC---GGVP 446
Query: 175 TLWDQLNPKNKQDNVVQGFVTGALRNL 201
L L + +DN V+ VTG L NL
Sbjct: 447 ALVRLL--RAARDNEVRELVTGTLWNL 471
Score = 75 (31.5 bits), Expect = 0.00046, Sum P(2) = 0.00046
Identities = 26/79 (32%), Positives = 44/79 (55%)
Query: 500 ILTEQVDDSKWAITAAGGIPPLVQLLEAGSQKAREV--AAHVLWILCCHSEDIRACVESA 557
I+++ +D+++ ++ A G+P LV L+ A SQ RE A+HVL + + E +R ++
Sbjct: 786 IVSDSLDNAR-SLLQARGVPALVALV-ASSQSVREAKAASHVLQTVWSYKE-LRGTLQKD 842
Query: 558 GAVPA-FLWLLKSG-GPKG 574
G A F + GPKG
Sbjct: 843 GWTKARFQSAAATAKGPKG 861
>TAIR|locus:2150295 [details] [associations]
symbol:ARIA "ARM repeat protein interacting with ABF2"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0005737 "cytoplasm" evidence=ISM] [GO:0005515
"protein binding" evidence=IPI] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0009651 "response to salt stress" evidence=IEP]
[GO:0009737 "response to abscisic acid stimulus" evidence=IEP;IMP]
[GO:0010187 "negative regulation of seed germination" evidence=IMP]
[GO:0000956 "nuclear-transcribed mRNA catabolic process"
evidence=RCA] InterPro:IPR000225 InterPro:IPR000210
InterPro:IPR013069 InterPro:IPR016024 Pfam:PF00514 Pfam:PF00651
PROSITE:PS50097 PROSITE:PS50176 SMART:SM00185 SMART:SM00225
UniPathway:UPA00143 GO:GO:0005886 GO:GO:0009737 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0009651 EMBL:AF296837
eggNOG:COG5064 HOGENOM:HOG000030229 GO:GO:0016567
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695 GO:GO:0010187
EMBL:AY058878 EMBL:AK317640 EMBL:AK220904 IPI:IPI00546696
RefSeq:NP_850852.1 UniGene:At.20128 ProteinModelPortal:B9DHT4
SMR:B9DHT4 STRING:B9DHT4 PaxDb:B9DHT4 PRIDE:B9DHT4
EnsemblPlants:AT5G19330.1 GeneID:832053 KEGG:ath:AT5G19330
TAIR:At5g19330 OMA:SEAFHAM PhylomeDB:B9DHT4 ArrayExpress:B9DHT4
Genevestigator:B9DHT4 Uniprot:B9DHT4
Length = 710
Score = 128 (50.1 bits), Expect = 0.00059, P = 0.00059
Identities = 56/246 (22%), Positives = 102/246 (41%)
Query: 494 AVQLIAILTEQVDDSKWAITAAGGIPPLVQLLEAGSQKAREVAAHVLWILCCHSEDIRAC 553
A I L + K + GGIPPLV+LLE K + AA L L ++D +
Sbjct: 176 AADAITNLAHENSSIKTRVRVEGGIPPLVELLEFSDSKVQRAAAGALRTLAFKNDDNKNQ 235
Query: 554 VESAGAVPAFLWLLKSGGPKGQDASAMALTKLIRAAD--------SATINQLLALLLGDS 605
+ A+P + +L S + + L+ ++ + + ++ LL
Sbjct: 236 IVECNALPTLILMLGSEDAAIHYEAVGVIGNLVHSSPHIKKEVLTAGALQPVIGLLSSCC 295
Query: 606 PSSKAHVIKVLGHVLTMA--LQEDLVQKGSAANKGLRSLVQVLNSSNEENQEYAASVLAD 663
P S+ +LG + + +VQ+G+ +R L+++L S + + +E +A L
Sbjct: 296 PESQREAALLLGQFASTDSDCKVHIVQRGA-----VRPLIEMLQSPDVQLKEMSAFALGR 350
Query: 664 LFSMRQDICGSLATDEIVNPCMRLLTSNTQMVATQSARALGALSRPTKTKTTNKMSYIAE 723
L + G +A + P ++LL S + +A AL L+ N +I
Sbjct: 351 LAQDAHNQAG-IAHSGGLGPLLKLLDSRNGSLQHNAAFALYGLA----DNEDNVSDFIRV 405
Query: 724 GDVKPL 729
G ++ L
Sbjct: 406 GGIQKL 411
>TAIR|locus:2141226 [details] [associations]
symbol:PUB8 "plant U-box 8" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005871 "kinesin complex"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA;NAS] [GO:0019894
"kinesin binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000225 InterPro:IPR003613 InterPro:IPR016024
Pfam:PF04564 PROSITE:PS50176 SMART:SM00184 SMART:SM00185
SMART:SM00504 UniPathway:UPA00143 EMBL:CP002687
GenomeReviews:CT486007_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 EMBL:AL161554 GO:GO:0008270 GO:GO:0016567
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151
EMBL:EF637083 EMBL:AL031187 EMBL:EF182720 HSSP:Q8VZ40
IPI:IPI00526364 PIR:T05177 RefSeq:NP_193866.1 UniGene:At.65012
ProteinModelPortal:O81902 SMR:O81902 PaxDb:O81902
EnsemblPlants:AT4G21350.1 GeneID:827885 KEGG:ath:AT4G21350
TAIR:At4g21350 eggNOG:NOG271823 HOGENOM:HOG000272744
InParanoid:O81902 OMA:LCKLPEN PhylomeDB:O81902
ProtClustDB:CLSN2685551 ArrayExpress:O81902 Genevestigator:O81902
Uniprot:O81902
Length = 374
Score = 124 (48.7 bits), Expect = 0.00060, P = 0.00060
Identities = 58/261 (22%), Positives = 119/261 (45%)
Query: 429 SHAEAKKVLIGLITMATADVREYLILS-LTKLCRREVGIWEAIGKRXXXXXXXXXXXXXX 487
SH++++ ++ L++ ++++ + L+ L +L +R+ I + +
Sbjct: 90 SHSQSQALISTLVSQSSSNASKLESLTRLVRLTKRDSSIRRKVTESGAVRAALDCVDSCN 149
Query: 488 XXHQEYAVQLIAILTEQVDDSKWAITAAGGIPPLVQLLEAGSQKAREVAAHVLWILCCHS 547
QE ++ L+ L+ + DD+K + A G I +V +L GS + +AA +L L
Sbjct: 150 QVLQEKSLSLLLNLSLE-DDNKVGLVADGVIRRIVTVLRVGSPDCKAIAATLLTSLAV-V 207
Query: 548 EDIRACVES-AGAVPAFLWLLKSGGPKGQDASAMALTKLIRAADSA--TIN-QLLALLLG 603
E +A + S A+ A + LL+ G + + SA AL L D+ ++ + +L+
Sbjct: 208 EVNKATIGSYPDAISALVSLLRVGNDRERKESATALYALCSFPDNRKRVVDCGSVPILVE 267
Query: 604 DSPSSKAHVIKVLGHVLTMALQEDLVQKGSAANKGLRSLVQVLNSSNEENQEYAASVLAD 663
+ S ++VLG ++ + + K S + LV VL + N + +Y+ +L
Sbjct: 268 AADSGLERAVEVLGLLVKCRGGREEMSKVSGF---VEVLVNVLRNGNLKGIQYSLFILNC 324
Query: 664 LFSMRQDICGSLATDEIVNPC 684
L +I + + +V C
Sbjct: 325 LCCCSGEIVDEVKREGVVEIC 345
>FB|FBgn0031905 [details] [associations]
symbol:CG5155 species:7227 "Drosophila melanogaster"
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR000225 InterPro:IPR016024 Pfam:PF00514
SMART:SM00185 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
EMBL:AE014134 GeneTree:ENSGT00680000099702 EMBL:BT088789
RefSeq:NP_609111.1 UniGene:Dm.18251 SMR:Q9VM21 IntAct:Q9VM21
MINT:MINT-868196 STRING:Q9VM21 EnsemblMetazoa:FBtr0079438
GeneID:34014 KEGG:dme:Dmel_CG5155 UCSC:CG5155-RA
FlyBase:FBgn0031905 InParanoid:Q9VM21 OMA:QLAITTE OrthoDB:EOG4NS1SK
GenomeRNAi:34014 NextBio:786440 InterPro:IPR026959
PANTHER:PTHR23315:SF4 Uniprot:Q9VM21
Length = 669
Score = 97 (39.2 bits), Expect = 0.00068, Sum P(2) = 0.00068
Identities = 58/202 (28%), Positives = 85/202 (42%)
Query: 515 AGGIPPLVQLLEAGSQKAREVAAHVLWILCCHSEDIRACVESAGAVPAFLW-LLKSGGPK 573
AGG+P +V LL + E A L C D +E AV +W LLK+ +
Sbjct: 417 AGGLPAMVSLLNSSHAPLLENLAKGLKE-CAEDPDSMRILEDLDAV-RLIWSLLKNPTTR 474
Query: 574 GQDASAMALTKLIRAA-DSATINQLLA----LLLGDSPSSKAHVIK-VLGHVLTMAL-QE 626
Q +A A+ +R A DSA + + L L++G S V+ V + T+A Q
Sbjct: 475 VQAHAAYAICPCVRNANDSAELVRSLVGAMELVVGLLKSKDIMVLSAVCAAIATIAQDQT 534
Query: 627 DL-VQKGSAANKGLRSLVQVLNSSNEENQEYAASVLADLFSMRQDICGSLATDEIVNPCM 685
+L + L LVQ + N A + A F + G L T V P +
Sbjct: 535 NLAILTDLKVIYKLADLVQTTDDLLRMNLAAAVAACA-CFGNNTEELGRLRT---VTPIV 590
Query: 686 RLLTSNTQMVATQSARALGALS 707
+TS+ +V +A AL LS
Sbjct: 591 TYMTSDNPLVHRSTAMALEKLS 612
Score = 83 (34.3 bits), Expect = 0.00068, Sum P(2) = 0.00068
Identities = 35/144 (24%), Positives = 67/144 (46%)
Query: 65 ILTIAKAKKEARLLIGSHAQAMPLFISILRSGTPLAKVNVAATLSVLCKDEDLRLKVLLG 124
+ T+A +K + S +PL +L+S + + T+ + +L +
Sbjct: 233 LFTLADSKHNMEQMRKSGI--VPLMAQLLKSCHIDVVIPIMGTVRKCSSEPKFQLAITTE 290
Query: 125 GCIPPLLSLLKSESTDTRKAAAEALYEVSSGGLSDDHVGMKIFVTEGVVPTLWDQLNPKN 184
G IP ++S L SE+T+ + + A+Y+ + G + D V G+ P L + KN
Sbjct: 291 GMIPDIVSHLSSENTELKMEGSTAIYKCAFDGTTRDLVRE----AGGLEP-LVTIIKDKN 345
Query: 185 KQDN--VVQGFVTGALRNLCGDKD 206
++N +++G TGA+ +C D
Sbjct: 346 VRENKPLLRG-ATGAIW-MCAVTD 367
>ZFIN|ZDB-GENE-070501-1 [details] [associations]
symbol:dysf "dysferlin, limb girdle muscular
dystrophy 2B (autosomal recessive)" species:7955 "Danio rerio"
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0048644
"muscle organ morphogenesis" evidence=IMP] [GO:0030315 "T-tubule"
evidence=IDA] [GO:0042383 "sarcolemma" evidence=IDA] [GO:0001778
"plasma membrane repair" evidence=IMP] [GO:0033292 "T-tubule
organization" evidence=IMP] InterPro:IPR000008 InterPro:IPR006614
InterPro:IPR008973 InterPro:IPR012560 InterPro:IPR012561
Pfam:PF00168 Pfam:PF08150 Pfam:PF08165 SMART:SM00239 SMART:SM00693
SMART:SM00694 ZFIN:ZDB-GENE-070501-1 GO:GO:0016021 GO:GO:0048644
GO:GO:0030315 InterPro:IPR018029 SUPFAM:SSF49562 PROSITE:PS50004
GO:GO:0033292 GO:GO:0001778 InterPro:IPR012968 Pfam:PF08151
EMBL:AB673046 UniGene:Dr.11738 Uniprot:I0J0E6
Length = 2097
Score = 132 (51.5 bits), Expect = 0.00080, P = 0.00079
Identities = 29/112 (25%), Positives = 59/112 (52%)
Query: 2020 NNLKQTMGTTNAFCRLTIGNGPPRQTKVVSHSISPEWKEGFTWAFD-VP-PKGQKLHIIC 2077
N L ++A+C +T G ++TKV+ ++++P W EGF W VP G +LH++
Sbjct: 11 NVLTHDEDISDAYCTVTY-EGTKKKTKVIKNNVNPVWNEGFEWDLKGVPLDSGAELHVVV 69
Query: 2078 KSKNTFGKST-LGKVTIQIDKVVTEGVYSGLFNLNH-DNNKDSSSRTLEIEI 2127
K G++ LG+ + + V+ + F ++ D ++S+ T+ +++
Sbjct: 70 KDHEKMGRNRFLGECRVALRDVLNSPNLAATFTVSLVDTKRNSTGATITLQV 121
>UNIPROTKB|F1SLE7 [details] [associations]
symbol:DYSF "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0031410 "cytoplasmic vesicle" evidence=IEA] [GO:0030315
"T-tubule" evidence=IEA] [GO:0030027 "lamellipodium" evidence=IEA]
[GO:0006906 "vesicle fusion" evidence=IEA] [GO:0005544
"calcium-dependent phospholipid binding" evidence=IEA] [GO:0001778
"plasma membrane repair" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] InterPro:IPR000008 InterPro:IPR006614
InterPro:IPR008973 InterPro:IPR012560 InterPro:IPR012561
Pfam:PF00168 Pfam:PF08150 Pfam:PF08165 SMART:SM00239 SMART:SM00693
SMART:SM00694 GO:GO:0016021 GO:GO:0031410 GO:GO:0030315
InterPro:IPR018029 SUPFAM:SSF49562 PROSITE:PS50004 GO:GO:0005544
GO:GO:0006906 GO:GO:0001778 InterPro:IPR012968 InterPro:IPR010482
Pfam:PF08151 Pfam:PF06398 OMA:KRHRQAE GeneTree:ENSGT00550000074414
EMBL:CU539050 EMBL:CU928559 Ensembl:ENSSSCT00000009103
Uniprot:F1SLE7
Length = 1927
Score = 131 (51.2 bits), Expect = 0.00093, P = 0.00093
Identities = 33/124 (26%), Positives = 61/124 (49%)
Query: 2012 LTVTIKRGNNLK-QTMGTTNAFCRLTIGNGPPRQTKVVSHSISPEWKEGFTWAFDVPPKG 2070
L V I N+ Q ++A+C G ++TKV+ ++++P W EGF W P
Sbjct: 2 LRVFILYAENVHTQDSDISDAYCSAVFA-GVKKRTKVIKNNVNPVWNEGFEWDLKGVPLD 60
Query: 2071 Q--KLHIICKSKNTFGKST-LGKVTIQIDKVVTEGVYSGLFNLNH-DNNKDSSSRTLEIE 2126
Q +LH++ K T G++ LG+ + + +V+ S FN D K + +L ++
Sbjct: 61 QSSELHVVVKDHETMGRNRFLGEANVPLREVLATPSLSASFNAPLLDTKKQPTGASLVLQ 120
Query: 2127 IIWS 2130
+ ++
Sbjct: 121 VSYT 124
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.318 0.133 0.375 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 2138 2001 0.00083 126 3 11 22 0.39 34
41 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 40
No. of states in DFA: 633 (67 KB)
Total size of DFA: 670 KB (2293 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 159.17u 0.18s 159.35t Elapsed: 00:00:10
Total cpu time: 159.18u 0.18s 159.36t Elapsed: 00:00:10
Start: Mon May 20 23:15:55 2013 End: Mon May 20 23:16:05 2013