Query 000135
Match_columns 2087
No_of_seqs 280 out of 1176
Neff 2.9
Searched_HMMs 29240
Date Mon Mar 25 19:01:56 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/000135.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/000135hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3bow_A Calpain-2 catalytic sub 100.0 3.6E-77 1.2E-81 727.5 30.7 354 1693-2064 34-417 (714)
2 1qxp_A MU-like calpain; M-calp 100.0 3E-76 1E-80 731.0 29.5 353 1693-2063 34-418 (900)
3 2r9f_A Calpain-1 catalytic sub 100.0 7.3E-73 2.5E-77 642.5 24.1 302 1693-2012 19-334 (339)
4 2nqa_A Calpain 8; calpain, cal 100.0 5.5E-73 1.9E-77 639.9 22.7 299 1693-2009 14-326 (326)
5 1ziv_A Calpain 9; cysteine pro 100.0 2.5E-72 8.4E-77 638.2 23.8 296 1693-2011 23-333 (339)
6 2qfe_A Calpain-7; C2-like doma 98.1 3.1E-06 1.1E-10 87.8 5.8 46 2013-2063 25-71 (148)
7 3pvn_A C-reactive protein; pen 97.8 0.00013 4.5E-09 78.4 13.1 171 1399-1598 1-176 (206)
8 3flp_A SAP-like pentraxin; phy 97.8 0.00019 6.6E-09 77.5 14.4 168 1434-1618 33-204 (217)
9 3kqr_A Serum amyloid P-compone 97.8 0.00016 5.4E-09 77.9 13.0 171 1399-1598 1-174 (204)
10 4dqa_A Uncharacterized protein 97.1 0.0021 7.1E-08 74.5 11.4 135 1434-1598 162-303 (355)
11 1za4_A Thrombospondin 1; TSP-1 93.8 0.25 8.5E-06 55.2 10.7 114 1433-1559 72-191 (251)
12 2v73_A CBM40, putative EXO-alp 91.9 0.5 1.7E-05 51.8 9.4 143 1434-1599 41-189 (191)
13 1a8d_A Tetanus neurotoxin; clo 91.6 0.29 9.9E-06 59.1 7.8 141 1434-1599 86-244 (452)
14 2erf_A Thrombospondin-1; TSP-1 89.9 0.88 3E-05 49.3 9.0 114 1433-1559 62-181 (209)
15 3sh4_A LG3 peptide; actin disa 85.0 1.8 6.3E-05 45.6 7.7 76 1472-1558 68-143 (195)
16 1f5f_A SHBG, sex hormone-bindi 84.4 1.5 5.1E-05 46.6 6.8 52 1471-1530 70-121 (205)
17 3v64_A Low-density lipoprotein 83.9 2.1 7.3E-05 45.0 7.6 77 1472-1559 69-145 (191)
18 1d2s_A SHBG, sex hormone-bindi 82.8 1.3 4.4E-05 46.0 5.4 51 1471-1529 58-108 (170)
19 1pz7_A Agrin; structural prote 82.1 2.5 8.6E-05 44.8 7.3 77 1472-1559 82-158 (204)
20 3qcw_A Neurexin-1-alpha; synap 81.9 8.8 0.0003 51.0 13.8 50 1472-1528 1115-1164(1245)
21 3pve_A Agrin, AGRN protein; mR 81.5 3.3 0.00011 43.4 7.9 77 1472-1559 69-145 (189)
22 2sli_A Intramolecular trans-si 81.1 6 0.0002 49.9 11.3 148 1435-1600 37-194 (679)
23 2r16_A Neurexin-1-alpha; beta- 79.3 2.3 8E-05 44.4 5.9 50 1472-1529 60-109 (182)
24 3asi_A Neurexin-1-alpha; beta- 78.6 12 0.0004 43.5 11.9 96 1472-1588 283-378 (410)
25 1dyk_A Laminin alpha 2 chain; 77.1 4 0.00014 47.1 7.5 75 1472-1558 90-164 (394)
26 2uur_A Collagen alpha-1(IX) ch 76.6 1.9 6.4E-05 48.2 4.4 50 1501-1556 151-200 (245)
27 3bod_A Neurexin-1-alpha; neure 76.1 5 0.00017 41.8 7.2 78 1472-1558 63-140 (178)
28 2h0b_A Neurexin-1-alpha; B-san 75.4 4.7 0.00016 41.7 6.8 80 1472-1559 59-138 (184)
29 2jd4_A Laminin subunit alpha-1 73.9 6.1 0.00021 45.2 7.8 77 1471-1558 75-151 (383)
30 3rsj_A BONT/F; clostridium bot 68.7 4 0.00014 49.0 4.8 82 1498-1599 135-218 (413)
31 2r1d_A Neurexin-1-beta, neurex 66.2 9.3 0.00032 41.8 6.8 78 1472-1558 97-174 (226)
32 2r1b_A Neurexin-1-beta, neurex 65.4 6 0.0002 42.9 5.1 50 1472-1528 69-118 (220)
33 2jd4_A Laminin subunit alpha-1 64.8 20 0.00068 41.0 9.4 80 1472-1558 252-331 (383)
34 1epw_A Bontoxilysin B, botulin 62.8 6.6 0.00022 52.0 5.5 77 1505-1598 999-1075(1290)
35 1dyk_A Laminin alpha 2 chain; 62.3 23 0.00078 40.9 9.4 80 1472-1558 264-343 (394)
36 3v0a_B NTNH; botulinum neuroto 59.7 8.6 0.0003 50.0 5.7 78 1501-1599 959-1037(1196)
37 1yal_A Chymopapain; hydrolase, 57.7 22 0.00075 38.5 7.8 41 1927-1993 157-197 (218)
38 2nyy_A Botulinum neurotoxin ty 57.7 11 0.00038 50.1 6.2 77 1505-1599 1011-1089(1295)
39 2wjs_A Laminin subunit alpha-2 56.8 18 0.00061 44.2 7.6 79 1471-1558 438-516 (608)
40 3p5u_A Actinidin; SAD, cystein 56.7 24 0.00083 38.1 7.9 41 1927-1993 160-200 (220)
41 1cqd_A Protein (protease II); 56.6 23 0.0008 38.4 7.8 40 1927-1992 159-198 (221)
42 2jkb_A Sialidase B; intramolec 55.8 9.4 0.00032 48.3 5.2 141 1435-1598 59-214 (686)
43 3ois_A Cysteine protease; alph 53.6 9 0.00031 43.3 4.1 42 1927-1996 235-276 (291)
44 8pch_A Cathepsin H; hydrolase, 53.3 18 0.00062 38.9 6.2 41 1926-1992 163-203 (220)
45 3qcw_A Neurexin-1-alpha; synap 53.1 16 0.00056 48.6 7.0 76 1472-1558 487-562 (1245)
46 1iwd_A Ervatamin B; cysteine p 52.8 23 0.00079 38.3 7.0 40 1927-1992 156-195 (215)
47 3f75_A Toxopain-2, cathepsin L 51.7 18 0.0006 39.1 5.8 43 1925-1993 163-207 (224)
48 1ppo_A Protease omega; hydrola 50.7 25 0.00085 38.1 6.8 41 1927-1993 157-197 (216)
49 3asi_A Neurexin-1-alpha; beta- 50.0 23 0.00078 41.1 6.8 78 1472-1559 58-135 (410)
50 3ovx_A Cathepsin S; hydrolase, 48.1 22 0.00074 38.3 5.8 42 1926-1993 162-203 (218)
51 1h30_A GAS6, growth-arrest-spe 47.5 24 0.00081 41.3 6.5 51 1471-1529 93-143 (422)
52 1s4v_A Cysteine endopeptidase; 46.9 26 0.0009 38.3 6.3 40 1927-1992 160-200 (229)
53 3f5v_A DER P 1 allergen; aller 46.8 21 0.00073 38.5 5.5 42 1925-1992 166-207 (222)
54 3u8e_A Papain-like cysteine pr 46.4 28 0.00097 37.7 6.4 41 1927-1993 160-201 (222)
55 3kwz_A Cathepsin K; enzyme inh 46.0 25 0.00087 37.7 5.9 41 1926-1992 159-199 (215)
56 3qsd_A Cathepsin B-like peptid 41.6 24 0.00081 39.0 5.0 27 1927-1953 199-225 (254)
57 2fo5_A Cysteine proteinase EP- 38.9 40 0.0014 37.9 6.3 41 1927-1993 165-206 (262)
58 2fe0_A SMP-1, small myristoyla 38.1 6 0.00021 41.6 -0.4 41 1631-1673 93-133 (136)
59 1pxv_A Cysteine protease; hydr 37.3 53 0.0018 36.2 6.6 33 1921-1953 122-154 (183)
60 2b1m_A SPE31; papain-like, sug 37.2 39 0.0013 37.5 5.8 41 1927-1993 166-206 (246)
61 3i06_A Cruzipain; autocatalyti 36.8 31 0.001 37.3 4.8 40 1927-1992 160-199 (215)
62 1ms9_A Trans-sialidase; trans- 36.3 48 0.0017 42.1 7.1 82 1504-1598 555-636 (648)
63 2wjs_A Laminin subunit alpha-2 34.7 71 0.0024 39.0 8.0 79 1472-1558 64-151 (608)
64 1m6d_A Cathepsin F, catsf; pap 33.9 51 0.0017 35.6 5.9 41 1926-1992 158-198 (214)
65 2e01_A Cysteine proteinase 1; 32.8 1.1E+02 0.0038 37.5 9.1 46 1927-1998 371-419 (457)
66 1lpl_A Hypothetical 25.4 kDa p 32.8 50 0.0017 32.9 5.1 74 1476-1562 13-93 (95)
67 2oul_A Falcipain 2; cysteine p 32.7 42 0.0014 36.9 5.1 41 1927-1993 172-222 (241)
68 3cbj_A Cathepsin B; cathepsin 32.5 39 0.0013 37.7 4.9 41 1926-1992 202-242 (266)
69 3bwk_A Cysteine protease falci 31.8 45 0.0015 36.8 5.1 41 1927-1993 174-224 (243)
70 1deu_A Procathepsin X; cystein 31.3 56 0.0019 36.9 5.9 43 1926-1994 212-254 (277)
71 2xu3_A Cathepsin L1; hydrolase 30.4 38 0.0013 36.7 4.2 42 1926-1993 160-205 (220)
72 3qt4_A Cathepsin-L-like midgut 29.5 77 0.0026 36.9 6.8 42 1926-1993 273-314 (329)
73 1h30_A GAS6, growth-arrest-spe 29.1 92 0.0031 36.4 7.4 57 1500-1558 311-372 (422)
74 2lnm_A Protein TIC 40, chlorop 26.3 64 0.0022 29.4 4.3 49 505-562 4-52 (62)
75 1xkg_A DER P I, major mite fec 25.4 71 0.0024 36.9 5.5 39 1928-1992 249-287 (312)
76 2c0y_A Procathepsin S; proenzy 24.8 81 0.0028 36.3 5.8 41 1926-1992 259-299 (315)
77 3zr5_A Galactocerebrosidase; h 24.2 1.8E+02 0.0063 37.0 9.2 83 1433-1528 531-619 (656)
78 1by8_A Protein (procathepsin K 23.6 83 0.0028 36.2 5.6 41 1926-1992 258-298 (314)
79 1pci_A Procaricain; zymogen, h 22.9 92 0.0032 36.0 5.8 40 1927-1992 263-302 (322)
80 2o6x_A Procathepsin L1, secret 22.3 97 0.0033 35.6 5.8 40 1927-1992 251-290 (310)
81 3hhi_A Cathepsin B-like cystei 22.0 93 0.0032 36.1 5.6 40 1927-1992 258-297 (325)
82 3pbh_A Procathepsin B; thiol p 21.8 95 0.0033 35.8 5.6 41 1926-1992 259-299 (317)
83 3qj3_A Cathepsin L-like protei 21.6 1E+02 0.0035 35.8 5.9 42 1926-1993 275-316 (331)
84 3oja_A Leucine-rich immune mol 21.2 1.1E+02 0.0036 36.4 6.0 52 1289-1341 404-459 (487)
No 1
>3bow_A Calpain-2 catalytic subunit; cysteine protease, inhibitor, cell membrane, hydrolase, MEMB protease, thiol protease, phosphoprotein; 2.40A {Rattus norvegicus} PDB: 3df0_A 1df0_A 1u5i_A 1kfu_L 1kfx_L
Probab=100.00 E-value=3.6e-77 Score=727.47 Aligned_cols=354 Identities=36% Similarity=0.705 Sum_probs=308.5
Q ss_pred HHHHHHHHcCCCceecCCCCCCCCCcccCCCCCCcccccccccccccccccccccCCCceeecCCCCCCCcccCCCCCch
Q 000135 1693 AVKEALSARGERQFTDHEFPPDDQSLYVDPGNPPSKLQVVAEWMRPSEIVKESRLDCQPCLFSGAVNPSDVCQGRLGDCW 1772 (2087)
Q Consensus 1693 aIKE~cl~rGeklFeDPEFPPndsSLy~Dp~~PpsKlq~vIeWKRPsEI~~e~k~~snP~LF~dgISP~DIkQGsLGDCW 1772 (2087)
++++.|.++| .+|+||+|||+++||+.++..|..+....++|+||.||++ +|++|.++++|.||+||.+||||
T Consensus 34 ~l~~~c~~~~-~~f~D~~Fp~~~~sl~~~~~~~~~~~~~~~~W~Rp~e~~~------~p~~~~~~~~~~di~QG~lgDCw 106 (714)
T 3bow_A 34 TLRNECLEAG-ALFQDPSFPALPSSLGFKELGPYSSKTRGIEWKRPTEICA------DPQFIIGGATRTDICQGALGDSW 106 (714)
T ss_dssp HHHHHHHHHT-CCCCCTTSCSSGGGTCSSTTSTTCGGGTTCEEECHHHHCS------SCBSCSSCSCGGGCBCCSSSCHH
T ss_pred HHHHHHHHcC-CeeeCcCCCCCccccccCCCCccccccCCceEEChHHHhc------CCeeeeCCCCccccccCCcCChH
Confidence 4566788776 5999999999999999876555443344579999999986 48899999999999999999999
Q ss_pred HHHHHHHHhccccccccccccc----cCCCCcEEEEEeeCCEEEEEEEeccccCCCCCceEEeecCCCCchhHHHHHHHH
Q 000135 1773 FLSAVAVLTEVSQISEVIITPE----YNEEGIYTVRFCIQGEWVPVVVDDWIPCESPGKPAFATSKKGHELWVSILEKAY 1848 (2087)
Q Consensus 1773 FLAALAALAE~PrLle~fI~Pe----yNe~GIY~VRL~iNGeWReVVVDDrLPc~~nGKPLFArSsd~nELWpSLLEKAY 1848 (2087)
|||||++|+++|.++++++++. .++.|+|+||||++|+|+.|+|||+||+. +|+++|++|.+++|+|++||||||
T Consensus 107 ~laala~la~~~~ll~~v~~~~~~~~~~~~G~y~~~~~~~G~w~~VvvDD~lP~~-~g~~~f~~s~~~~e~W~~LlEKAy 185 (714)
T 3bow_A 107 LLAAIASLTLNEEILARVVPLDQSFQENYAGIFHFQFWQYGEWVEVVVDDRLPTK-DGELLFVHSAEGSEFWSALLEKAY 185 (714)
T ss_dssp HHHHHHHHTTSHHHHHHHSCTTCCSSSSCSSEEEEEEEETTEEEEEEEESCEEEE-TTEESSCBCSSTTBCHHHHHHHHH
T ss_pred HHHHHHHHHhChHHHHhhcCcCcCcccCCceEEEEEEeeCCEEEEEEEeccceee-CCceEEeecCCCCcchHHHHHHHH
Confidence 9999999999999888887642 46799999999999999999999999996 499999999999999999999999
Q ss_pred HHhcCCcccccCCChhhhhhhcCCCcceEEeCCchhhhhccchhHHHHHHHHHhcCCCEEEecCCC---CCCccccccCc
Q 000135 1849 AKLHGSYEALEGGLVQDALVDLTGGAGEEIDMRSAQAQIDLASGRLWSQLLRFKQEGFLLGAGSPS---GSDVHISSSGI 1925 (2087)
Q Consensus 1849 AKLhGSYEALeGGnpsEALqDLTGGP~E~IDL~sa~aq~DldsdeLWk~Llkalk~G~LMgcSTPs---gSDeeves~GL 1925 (2087)
||+||||++|.||++.+||+||||++++.+++++. ++++|+.|.++.++|++|+|++.. ...+.....||
T Consensus 186 AK~~G~Y~~l~gg~~~~al~~lTG~~~~~~~l~~~-------~~~l~~~l~~~~~~g~l~~~~~~~~~~~~~~~~~~~GL 258 (714)
T 3bow_A 186 AKINGCYEALSGGATTEGFEDFTGGIAEWYELRKP-------PPNLFKIIQKALEKGSLLGCSIDITSAADSEAVTYQKL 258 (714)
T ss_dssp HHHTSSSGGGSSBCHHHHHHHHHCCEEEEEETTSC-------CTTHHHHHHHHHHTTCEEEEECCSTTSCTTCCBCTTSC
T ss_pred HHHhCCcccccCCCHHHHHHHhhCCCeEEEEcCCC-------cHHHHHHHHHHHhCCCeEEEEcccCCcccccchhcCCC
Confidence 99999999999999999999999999999998753 457999999999999999998731 21234568899
Q ss_pred ccCceeEEEEEEEEC----CEEEEEEecCCCCCccccCCCCCCCcccch---HHhhhhcCCCCCCCCeEEEehhhhhhcc
Q 000135 1926 VQGHAYSILQVREVD----GHKLVQIRNPWANEVEWNGPWSDSSPEWTD---RMKHKLKHVPQSKDGIFWMSWQDFQIHF 1998 (2087)
Q Consensus 1926 VsGHAYSVLDVrEVd----G~RLVRLRNPWG~~~EWKGdWSD~S~eWTe---eLKkkL~~~~~sDDGeFWMSfEDFLkyF 1998 (2087)
+.+|||+|+++++++ +++|||||||||+ .||||+|||+|++|++ +.+++|.+. .+||+|||+|+||++||
T Consensus 259 ~~~HaYsvl~~~~v~~~~~~~~lv~lrNPWg~-~ew~G~wsd~s~~W~~~~~~~~~~l~~~--~~dg~FWm~~~df~~~F 335 (714)
T 3bow_A 259 VKGHAYSVTGAEEVESSGSLQKLIRIRNPWGQ-VEWTGKWNDNCPSWNTVDPEVRANLTER--QEDGEFWMSFSDFLRHY 335 (714)
T ss_dssp BTTSCEEEEEEEEEEETTEEEEEEEEECTTSC-CCCCSTTSTTCGGGGGSCHHHHHHHCCC--CCSSEEEEEHHHHHHHC
T ss_pred cCCceEEEeeeEEeecCCCceEEEEEECCCCC-cccCCCCCCCCccccccCHHHHHHhCCC--CCCCeEEEEhHHHHhhC
Confidence 999999999999984 4799999999995 7999999999999994 577777653 48999999999999999
Q ss_pred cceeEeeEcCCCCc---------eeeccee-eccCCCCCCCC-CCCCcCCeEEEEecCCCC-----CCCEEEEEEeccCC
Q 000135 1999 RSIYVCRVYPSEMR---------YSVHGQW-RGYSAGGCQDY-ASWNQNPQFRLRASGSDA-----SFPIHVFITLTQSR 2062 (2087)
Q Consensus 1999 ssLyICrL~Pds~r---------yrVhGeW-rGsSAGGc~n~-~SF~~NPQF~LeVtssD~-----sep~eVlISLsQkr 2062 (2087)
+.++||++.|+.+. ..++|+| ++.+||||.++ .||++||||.|+++++++ .++++|+|+|+|++
T Consensus 336 ~~~~ic~~~~~~~~~~~~~~w~~~~~~g~W~~g~taGG~~~~~~tf~~NPqf~l~v~~~~~~~~~~~~~~~v~v~L~Q~~ 415 (714)
T 3bow_A 336 SRLEICNLTPDTLTCDSYKKWKLTKMDGNWRRGSTAGGCRNYPNTFWMNPQYLIKLEEEDEDDEDGERGCTFLVGLIQKH 415 (714)
T ss_dssp CEEEEEESSSSCTTCSSCCEEEEEEEEEEECTTTTCCCCTTCHHHHTTSCCEEEEECGGGCBCGGGCCBEEEEEEEEEES
T ss_pred CeEEEEEecccccccccCcceEEEEEeceeccCCCCCCCCCccccccCCceEEEEEccCCccccccCCccEEEEEeeeec
Confidence 99999999887541 2478999 47899999998 799999999999986543 34699999999985
Q ss_pred cc
Q 000135 2063 FY 2064 (2087)
Q Consensus 2063 ~Y 2064 (2087)
..
T Consensus 416 ~r 417 (714)
T 3bow_A 416 RR 417 (714)
T ss_dssp CG
T ss_pred cc
Confidence 43
No 2
>1qxp_A MU-like calpain; M-calpain, MU-calpain, catalytic triad, Ca(2+) requirement, hydrolase chimera; 2.80A {Rattus norvegicus} SCOP: a.39.1.8 a.39.1.8 b.14.1.1 d.3.1.3
Probab=100.00 E-value=3e-76 Score=730.98 Aligned_cols=353 Identities=37% Similarity=0.713 Sum_probs=300.1
Q ss_pred HHHHHHHHcCCCceecCCCCCCCCCcccCCCCCCcccccccccccccccccccccCCCceeecCCCCCCCcccCCCCCch
Q 000135 1693 AVKEALSARGERQFTDHEFPPDDQSLYVDPGNPPSKLQVVAEWMRPSEIVKESRLDCQPCLFSGAVNPSDVCQGRLGDCW 1772 (2087)
Q Consensus 1693 aIKE~cl~rGeklFeDPEFPPndsSLy~Dp~~PpsKlq~vIeWKRPsEI~~e~k~~snP~LF~dgISP~DIkQGsLGDCW 1772 (2087)
++++.|.++| .+|+||+|||+++||+.++..|..+....++|+||+||++ +|++|.++++|.||+||.+||||
T Consensus 34 ~l~~~c~~~~-~~f~D~~Fp~~~~sl~~~~~~~~~~~~~~~~W~Rp~e~~~------~~~~~~~~~~~~di~Qg~lgdcw 106 (900)
T 1qxp_A 34 TLRNECLEAG-ALFQDPAFPPVSHSLGFKELGPNSSKTYGIKWKRPTELLS------NPQFIVDGATRTDICQGALGDSW 106 (900)
T ss_dssp HHHHHHHTTT-CCCCCSSSCSSSGGGCSSSSSSSCGGGCSCCCBCGGGSSS------SCBSCCCCCSSCCCCCCTTSCST
T ss_pred HHHHHHHHcC-CeeECcCCCCCccccccCCCCcccccccCceEEChHHHcc------CCeeeeCCCCcccccCCCcccHH
Confidence 4566687776 6999999999999999876555443344579999999986 58899999999999999999999
Q ss_pred HHHHHHHHhccccccccccccc----cCCCCcEEEEEeeCCEEEEEEEeccccCCCCCceEEeecCCCCchhHHHHHHHH
Q 000135 1773 FLSAVAVLTEVSQISEVIITPE----YNEEGIYTVRFCIQGEWVPVVVDDWIPCESPGKPAFATSKKGHELWVSILEKAY 1848 (2087)
Q Consensus 1773 FLAALAALAE~PrLle~fI~Pe----yNe~GIY~VRL~iNGeWReVVVDDrLPc~~nGKPLFArSsd~nELWpSLLEKAY 1848 (2087)
|||||++|+++|.++++++++. .++.|+|+||||++|+|+.|+|||+||+. +|+|+|++|.+++|+|++||||||
T Consensus 107 ~laal~~l~~~~~~~~~~~~~~~~~~~~~~G~y~~~~~~~G~w~~V~vDD~lP~~-~g~~~f~~s~~~~e~W~~LlEKAy 185 (900)
T 1qxp_A 107 LLAAIASLTLNETILHRVVPYGQSFQEGYAGIFHFQLWQFGEWVDVVVDDLLPTK-DGKLVFVHSAQGNEFWSALLEKAY 185 (900)
T ss_dssp THHHHHHHHTCHHHHHTTSCSSCCSSTTCSSEEEEEEEETTEEEEEEEESCBCEE-TTEESSSCCSSSCBCHHHHHHHHH
T ss_pred HHHHHHHHhhCHHHHHhhcCCCcccccccCceEEEEEeECCEEEEEEECCccccc-CCceeeeecCCCCcchHHHHHHHH
Confidence 9999999999999888887643 46799999999999999999999999996 599999999999999999999999
Q ss_pred HHhcCCcccccCCChhhhhhhcCCCcceEEeCCchhhhhccchhHHHHHHHHHhcCCCEEEecCCC---CCCccccccCc
Q 000135 1849 AKLHGSYEALEGGLVQDALVDLTGGAGEEIDMRSAQAQIDLASGRLWSQLLRFKQEGFLLGAGSPS---GSDVHISSSGI 1925 (2087)
Q Consensus 1849 AKLhGSYEALeGGnpsEALqDLTGGP~E~IDL~sa~aq~DldsdeLWk~Llkalk~G~LMgcSTPs---gSDeeves~GL 1925 (2087)
||+||||++|.||++.+||++|||++++.+++++. ++++|+.|.++.++|++|+|+++. ...+.....||
T Consensus 186 aK~~G~Y~~l~gg~~~~~l~~lTG~~~~~~~~~~~-------~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl 258 (900)
T 1qxp_A 186 AKVNGSYEALSGGCTSEAFEDFTGGVTEWYDLQKA-------PSDLYQIILKALERGSLLGCSINISDIRDLEAITFKNL 258 (900)
T ss_dssp HHHHSSSGGGSSCCHHHHHHHTTSCBCCEEEGGGC-------CTTHHHHHHHHHTTTCEEEEECCC---------CCCCC
T ss_pred HHHhCCchhcCCCCHHHHHHHhhCCCeEEEecCCC-------hHHHHHHHHHHHhCCCEEEEEecCCCccccchhhcCCC
Confidence 99999999999999999999999999999998642 457999999999999999998752 11234577899
Q ss_pred ccCceeEEEEEEEEC----CEEEEEEecCCCCCccccCCCCCCCcccch---HHhhhhcCCCCCCCCeEEEehhhhhhcc
Q 000135 1926 VQGHAYSILQVREVD----GHKLVQIRNPWANEVEWNGPWSDSSPEWTD---RMKHKLKHVPQSKDGIFWMSWQDFQIHF 1998 (2087)
Q Consensus 1926 VsGHAYSVLDVrEVd----G~RLVRLRNPWG~~~EWKGdWSD~S~eWTe---eLKkkL~~~~~sDDGeFWMSfEDFLkyF 1998 (2087)
+++|||+|+++++++ +++||+||||||+ .||||+|||+|++|+. +.+++|.+. .+||+|||+|+||++||
T Consensus 259 ~~~haY~v~~~~~~~~~~~~~~lv~lrNPwg~-~ew~G~wsd~s~~W~~~~~~~~~~l~~~--~~dg~Fwm~~~df~~~F 335 (900)
T 1qxp_A 259 VRGHAYSVTDAKQVTYQGQRVNLIRMRNPWGE-VEWKGPWSDNSYEWNKVDPYEREQLRVK--MEDGEFWMSFRDFIREF 335 (900)
T ss_dssp ---CCCEEEEEEECCCSSSCCEEEEEECTTCC-CCCSCSCC-CCSCSSSSCCTHHHHTTCC--CCSSCCCCBSTTSSSCS
T ss_pred CCCceEEEeEEEEEecCCCceEEEEEeCCCCC-CCcCCCCCCCCcccccCCHHHHHHhCCC--CCCCeEEeEHHHHHhhC
Confidence 999999999999984 3799999999995 7999999999999994 577777653 68999999999999999
Q ss_pred cceeEeeEcCCCCc---------eeeccee-eccCCCCCCCC-CCCCcCCeEEEEecCCCC-------CCCEEEEEEecc
Q 000135 1999 RSIYVCRVYPSEMR---------YSVHGQW-RGYSAGGCQDY-ASWNQNPQFRLRASGSDA-------SFPIHVFITLTQ 2060 (2087)
Q Consensus 1999 ssLyICrL~Pds~r---------yrVhGeW-rGsSAGGc~n~-~SF~~NPQF~LeVtssD~-------sep~eVlISLsQ 2060 (2087)
+.++||++.|+.+. ..++|+| ++.++|||+++ .||++||||.|++++++. ..+|+|+|+|+|
T Consensus 336 ~~~~ic~~~~~~~~~~~~~~w~~~~~~g~W~~g~taGG~~~~~~tf~~NPqf~l~v~~~~~~~~~~~~~~~~~v~i~L~Q 415 (900)
T 1qxp_A 336 TKLEICNLTPDALKSRTLRNWNTTFYEGTWRRGSTAGGCRNYPATFWVNPQFKIRLEEVDDADDYDSRESGCSFLLALMQ 415 (900)
T ss_dssp EEEEEBCCCC--CCSSCSCCCBCCEEEEEECTTTTCCCCTTCTTTGGGSCBCEEEECSCCC-----CCSSCCEEEEEEEE
T ss_pred CeEEEEEecchhhccccCCceEEEeccccccCCCCCCCCCCcccccccCceEEEEEccCCccccccccCCCcEEEEEeee
Confidence 99999999887542 2478999 57899999998 799999999999986542 346899999999
Q ss_pred CCc
Q 000135 2061 SRF 2063 (2087)
Q Consensus 2061 kr~ 2063 (2087)
++.
T Consensus 416 ~~~ 418 (900)
T 1qxp_A 416 KHR 418 (900)
T ss_dssp C--
T ss_pred ccc
Confidence 854
No 3
>2r9f_A Calpain-1 catalytic subunit; protease, peptidase, inhibitor, alpha-ketoamide, hydrolase, thiol protease; HET: K2Z; 1.60A {Rattus norvegicus} SCOP: d.3.1.3 PDB: 1tlo_A* 2g8e_A* 1tl9_A* 2nqg_A* 2nqi_A* 2r9c_A* 2g8j_A* 1kxr_A 2ary_A 1zcm_A* 1mdw_A
Probab=100.00 E-value=7.3e-73 Score=642.50 Aligned_cols=302 Identities=38% Similarity=0.719 Sum_probs=263.2
Q ss_pred HHHHHHHHcCCCceecCCCCCCCCCcccCCCCCCcccccccccccccccccccccCCCceeecCCCCCCCcccCCCCCch
Q 000135 1693 AVKEALSARGERQFTDHEFPPDDQSLYVDPGNPPSKLQVVAEWMRPSEIVKESRLDCQPCLFSGAVNPSDVCQGRLGDCW 1772 (2087)
Q Consensus 1693 aIKE~cl~rGeklFeDPEFPPndsSLy~Dp~~PpsKlq~vIeWKRPsEI~~e~k~~snP~LF~dgISP~DIkQGsLGDCW 1772 (2087)
+|++.|.+++ .+|+||+|||+++||+.++..+..+....++|+||.||++ +|+||.++++|.||+||.+||||
T Consensus 19 ~l~~~c~~~~-~~F~D~~Fp~~~~Sl~~~~~~~~~~~~~~~~W~Rp~ei~~------~p~~~~~~~~~~di~QG~lGDCw 91 (339)
T 2r9f_A 19 NLRARCLQNG-VLFQDDAFPPVSHSLGFKELGPNSSKTYGIKWKRPTELLS------NPQFIVDGATRTDICQGALGDCW 91 (339)
T ss_dssp HHHHHHHHTT-CCCCCTTSCSSHHHHCSSTTSTTSHHHHHCEEECHHHHCS------SCBSCSSCSCGGGCBCCSSSCHH
T ss_pred HHHHHHHHcC-CceECcCCCCCccccccCCCCccccccCCceEEChHHHCc------CCEEeeCCCCcCccccCCccCHH
Confidence 3556677776 6999999999999999776555433334579999999986 48899999999999999999999
Q ss_pred HHHHHHHHhccccccccccccc----cCCCCcEEEEEeeCCEEEEEEEeccccCCCCCceEEeecCCCCchhHHHHHHHH
Q 000135 1773 FLSAVAVLTEVSQISEVIITPE----YNEEGIYTVRFCIQGEWVPVVVDDWIPCESPGKPAFATSKKGHELWVSILEKAY 1848 (2087)
Q Consensus 1773 FLAALAALAE~PrLle~fI~Pe----yNe~GIY~VRL~iNGeWReVVVDDrLPc~~nGKPLFArSsd~nELWpSLLEKAY 1848 (2087)
|||||++|+++|.++++++++. .++.|+|+||||+||+|+.|+|||+||+. +|+++|++|.+++|+|++||||||
T Consensus 92 llaAla~la~~~~li~~v~p~~q~~~~~~~G~y~vr~~~~G~W~~VvVDD~LP~~-~g~~~f~~s~~~~e~W~~LLEKAy 170 (339)
T 2r9f_A 92 LLAAIASLTLNETILHRVVPYGQSFQEGYAGIFHFQLWQFGEWVDVVVDDLLPTK-DGKLVFVHSAQGNEFWSALLEKAY 170 (339)
T ss_dssp HHHHHHHHTTCHHHHHHHSCSCCCSSTTCCSEEEEEEEETTEEEEEEEESCEEEE-TTEESSCBCSSTTBCHHHHHHHHH
T ss_pred HHHHHHHHHhCchhhhheEeccccccccCCceEEEEEeeCCEEEEEEEcCCCccc-CCceEEeeeCCCCcccHHHHHHHH
Confidence 9999999999999888887643 46789999999999999999999999996 599999999999999999999999
Q ss_pred HHhcCCcccccCCChhhhhhhcCCCcceEEeCCchhhhhccchhHHHHHHHHHhcCCCEEEecCCC---CCCccccccCc
Q 000135 1849 AKLHGSYEALEGGLVQDALVDLTGGAGEEIDMRSAQAQIDLASGRLWSQLLRFKQEGFLLGAGSPS---GSDVHISSSGI 1925 (2087)
Q Consensus 1849 AKLhGSYEALeGGnpsEALqDLTGGP~E~IDL~sa~aq~DldsdeLWk~Llkalk~G~LMgcSTPs---gSDeeves~GL 1925 (2087)
||+||||++|.||++.+||+||||++++.+++++. ++++|+.|.++.++|++|+|++.. ...+.....||
T Consensus 171 AKl~GsY~~l~gg~~~eal~dLTG~~~~~~~l~~~-------~~~l~~~l~~~~~~g~l~~~s~~~t~~~~~~~~~~~GL 243 (339)
T 2r9f_A 171 AKVNGSYEALSGGCTSEAFEDFTGGVTEWYDLQKA-------PSDLYQIILKALERGSLLGCSINISDIRDLEAITFKNL 243 (339)
T ss_dssp HHHHTSSGGGSSCCHHHHHHHTTCCEEEEEEGGGC-------CTTHHHHHHHHHHHTCEEEEECCCSSSSTTCSBCTTSC
T ss_pred HHHcCCcccccCCCHHHHHHHHhCCceEEEECCCC-------chHHHHHHHHHHHCCCeEEEEecCCCccchhhhhccCC
Confidence 99999999999999999999999999999998642 457999999999999999998742 22234578999
Q ss_pred ccCceeEEEEEEEEC----CEEEEEEecCCCCCccccCCCCCCCcccch---HHhhhhcCCCCCCCCeEEEehhhhhhcc
Q 000135 1926 VQGHAYSILQVREVD----GHKLVQIRNPWANEVEWNGPWSDSSPEWTD---RMKHKLKHVPQSKDGIFWMSWQDFQIHF 1998 (2087)
Q Consensus 1926 VsGHAYSVLDVrEVd----G~RLVRLRNPWG~~~EWKGdWSD~S~eWTe---eLKkkL~~~~~sDDGeFWMSfEDFLkyF 1998 (2087)
+.+|||+|+++++++ +++|||||||||. .||||+|||+|++|++ +.+++|++. .+||+|||+|+||++||
T Consensus 244 v~~HaYsVl~v~~v~~~~~~~~Lv~LrNPWg~-~eW~G~wsd~s~~W~~~~~~~~~~l~~~--~~dG~FWMs~~Df~~~F 320 (339)
T 2r9f_A 244 VRGHAYSVTDAKQVTYQGQRVNLIRMRNPWGE-VEWKGPWSDNSYEWNKVDPYEREQLRVK--MEDGEFWMSFRDFIREF 320 (339)
T ss_dssp BTTCCEEEEEEEEEEETTEEEEEEEEECTTSC-CCCCSTTSTTCGGGGGSCHHHHHHHCCC--CCSSEEEEEHHHHHHHC
T ss_pred cCCceEEEeEEEEEecCCCceEEEEEeCCCCC-ccccCCCCcCCccccccCHHHHHHhCCC--CCCCEEEEEHHHHHHhC
Confidence 999999999999973 4799999999995 7999999999999994 567778753 69999999999999999
Q ss_pred cceeEeeEcCCCCc
Q 000135 1999 RSIYVCRVYPSEMR 2012 (2087)
Q Consensus 1999 ssLyICrL~Pds~r 2012 (2087)
+.++||++.|+...
T Consensus 321 ~~l~ic~~~~~~~~ 334 (339)
T 2r9f_A 321 TKLEICNLTPDLEH 334 (339)
T ss_dssp CEEEEEECCC----
T ss_pred CcEEEEccCchhhh
Confidence 99999999988653
No 4
>2nqa_A Calpain 8; calpain, calcium-dependent cytoplasmic cysteine proteinases, like, EF-hand, structural genomics, structural genomics CON SGC; HET: AR7; 2.20A {Homo sapiens}
Probab=100.00 E-value=5.5e-73 Score=639.92 Aligned_cols=299 Identities=38% Similarity=0.732 Sum_probs=255.4
Q ss_pred HHHHHHHHcCCCceecCCCCCCCCCcccCCCCCCcccccccccccccccccccccCCCceeecCCCCCCCcccCCCCCch
Q 000135 1693 AVKEALSARGERQFTDHEFPPDDQSLYVDPGNPPSKLQVVAEWMRPSEIVKESRLDCQPCLFSGAVNPSDVCQGRLGDCW 1772 (2087)
Q Consensus 1693 aIKE~cl~rGeklFeDPEFPPndsSLy~Dp~~PpsKlq~vIeWKRPsEI~~e~k~~snP~LF~dgISP~DIkQGsLGDCW 1772 (2087)
+|++.|.+++ .+|+||+|||+++||+.+...+..+....++|+||+||++ +|++|.++++|.||+||.+||||
T Consensus 14 ~l~~~c~~~~-~~F~D~~Fp~~~~Sl~~~~~~~~~~~~~~~~W~Rp~ei~~------~p~~~~~~~~~~di~QG~lGDCw 86 (326)
T 2nqa_A 14 TLRQQCLDSG-VLFKDPEFPACPSALGYKDLGPGSPQTQGIIWKRPTELCP------SPQFIVGGATRTDICQGGLGDCW 86 (326)
T ss_dssp HHHHHHHHHT-CCCCCTTSCSSHHHHTC---------CCSCEEECHHHHCS------SCBSCSSCSCGGGCBCCSSCCHH
T ss_pred HHHHHHHHcC-CceECcCCCCCccccccCCCCccccccCCCeEEChHHHCc------CCEEeeCCCcccccccCCccccH
Confidence 3556677776 5999999999999998765544333334579999999986 58899999999999999999999
Q ss_pred HHHHHHHHhccccccccccccc----cCCCCcEEEEEeeCCEEEEEEEeccccCCCCCceEEeecCCCCchhHHHHHHHH
Q 000135 1773 FLSAVAVLTEVSQISEVIITPE----YNEEGIYTVRFCIQGEWVPVVVDDWIPCESPGKPAFATSKKGHELWVSILEKAY 1848 (2087)
Q Consensus 1773 FLAALAALAE~PrLle~fI~Pe----yNe~GIY~VRL~iNGeWReVVVDDrLPc~~nGKPLFArSsd~nELWpSLLEKAY 1848 (2087)
|||||++|+++|.++++++++. .++.|+|+||||++|+|+.|+|||+||+. +|+++|++|.+++|+|++||||||
T Consensus 87 llaAla~la~~~~li~~v~p~~q~~~~~~~G~y~vr~~~~G~w~~VvVDD~lP~~-~g~~~f~~s~~~~e~W~~LlEKAy 165 (326)
T 2nqa_A 87 LLAAIASLTLNEELLYRVVPRDQDFQENYAGIFHFQFWQYGEWVEVVIDDRLPTK-NGQLLFLHSEQGNEFWSALLEKAY 165 (326)
T ss_dssp HHHHHHHHHTSHHHHHHHSCSSCCSSTTCSSEEEEEEECSSSEEEEEEECCEEEE-TTEESSCBCSSTTBCHHHHHHHHH
T ss_pred HHHHHHHHHhChHHHHhhcCcCcCccccCCceEEEEEEECCEEEEEEEeCcCccc-CCceEEeecCCCCcchhHHHHHHH
Confidence 9999999999999888887642 46789999999999999999999999996 499999999999999999999999
Q ss_pred HHhcCCcccccCCChhhhhhhcCCCcceEEeCCchhhhhccchhHHHHHHHHHhcCCCEEEecCCCCC---CccccccCc
Q 000135 1849 AKLHGSYEALEGGLVQDALVDLTGGAGEEIDMRSAQAQIDLASGRLWSQLLRFKQEGFLLGAGSPSGS---DVHISSSGI 1925 (2087)
Q Consensus 1849 AKLhGSYEALeGGnpsEALqDLTGGP~E~IDL~sa~aq~DldsdeLWk~Llkalk~G~LMgcSTPsgS---Deeves~GL 1925 (2087)
||+||||++|.||++.+||++|||++++.+++++. ++++|+.|.++.++|++|+|++...+ .+.....||
T Consensus 166 AKl~GsY~~l~gg~~~eal~dLTG~~~~~~~l~~~-------~~~l~~~l~~~~~~g~l~~~~~~~~~~~~~~~~~~~GL 238 (326)
T 2nqa_A 166 AKLNGCYEALAGGSTVEGFEDFTGGISEFYDLKKP-------PANLYQIIRKALCAGSLLGCSIDVYSAAEAEAITSQKL 238 (326)
T ss_dssp HHHHSSSGGGSBSSCCTBTTTGGGCCEEEEETTSC-------CTTHHHHHHHHHHTTCEEEEECCCSSGGGTTCBCTTSC
T ss_pred HHHcCChhhccCCCHHHHHHHHhCCceEEEECCCC-------cHHHHHHHHHHHhCCCceEEeecCCCcccchhhhccCC
Confidence 99999999999999999999999999999998752 35799999999999999999875322 134578999
Q ss_pred ccCceeEEEEEEEEC----CEEEEEEecCCCCCccccCCCCCCCcccch---HHhhhhcCCCCCCCCeEEEehhhhhhcc
Q 000135 1926 VQGHAYSILQVREVD----GHKLVQIRNPWANEVEWNGPWSDSSPEWTD---RMKHKLKHVPQSKDGIFWMSWQDFQIHF 1998 (2087)
Q Consensus 1926 VsGHAYSVLDVrEVd----G~RLVRLRNPWG~~~EWKGdWSD~S~eWTe---eLKkkL~~~~~sDDGeFWMSfEDFLkyF 1998 (2087)
+.+|||+|+++++++ +++|||||||||+ .||||+|||+|++|++ +.+++|.+ ..+||+|||+|+||++||
T Consensus 239 v~~HaYsVl~v~~v~~~~~~~~lv~lrNPWg~-~eW~G~wsd~s~~W~~~~~~~~~~l~~--~~~dG~FWMs~~df~~~F 315 (326)
T 2nqa_A 239 VKSHAYSVTGVEEVNFQGHPEKLIRLRNPWGE-VEWSGAWSDDAPEWNHIDPRRKEELDK--KVEDGEFWMSLSDFVRQF 315 (326)
T ss_dssp BSSCCEEEEEEEEEEETTEEEEEEEEECTTCC--CCCSTTSTTCGGGGGSCHHHHHHHCC--CCCSSEEEEEHHHHHHHC
T ss_pred ccCceEEEEEEEEEecCCCceEEEEecCCCcC-ccccCCCCCCCccccccCHHHHHHhCC--CCCCCEEEEEHHHHHHhC
Confidence 999999999999984 4799999999995 7999999999999994 57777875 369999999999999999
Q ss_pred cceeEeeEcCC
Q 000135 1999 RSIYVCRVYPS 2009 (2087)
Q Consensus 1999 ssLyICrL~Pd 2009 (2087)
+.++||++.|+
T Consensus 316 ~~l~ic~~~pd 326 (326)
T 2nqa_A 316 SRLEICNLSPD 326 (326)
T ss_dssp SEEEEEC----
T ss_pred CcEEEEEeCCC
Confidence 99999999874
No 5
>1ziv_A Calpain 9; cysteine protease, papain, calcium-dependent, thiol protease, structural genomics consortium, SGC, hydrolase; 2.31A {Homo sapiens} SCOP: d.3.1.3 PDB: 2p0r_A*
Probab=100.00 E-value=2.5e-72 Score=638.20 Aligned_cols=296 Identities=38% Similarity=0.755 Sum_probs=258.6
Q ss_pred HHHHHHHHcCCCceecCCCCCCCCCcccCCCCCCcccccccccccccccccccccCCCceeecCCCCCCCcccCCCCCch
Q 000135 1693 AVKEALSARGERQFTDHEFPPDDQSLYVDPGNPPSKLQVVAEWMRPSEIVKESRLDCQPCLFSGAVNPSDVCQGRLGDCW 1772 (2087)
Q Consensus 1693 aIKE~cl~rGeklFeDPEFPPndsSLy~Dp~~PpsKlq~vIeWKRPsEI~~e~k~~snP~LF~dgISP~DIkQGsLGDCW 1772 (2087)
+|++.|.++| .+|+||+|||+++||+.++..+. .++|+||.||++ +|++|.++++|.||+||.+||||
T Consensus 23 ~l~~~c~~~~-~~F~D~~Fp~~~~Sl~~~~~~~~-----~~~W~Rp~ei~~------~p~~~~~~~~~~dI~QG~lGDCw 90 (339)
T 1ziv_A 23 QMRQECLQRG-TLFEDADFPASNSSLFYSERPQI-----PFVWKRPGEIVK------NPEFILGGATRTDICQGELGDCW 90 (339)
T ss_dssp HHHHHHHHTT-CCCCCSSSCSSGGGTCCC--CCC-----SCEEECGGGTSS------SCBSSCSCSCGGGCBCCTTCSCH
T ss_pred HHHHHHHHCC-CeeECcCCCCCccccccCCCCCC-----CceEEChHHHcC------CCeeeeCCCCccccccCCcCchH
Confidence 5677788776 59999999999999987654332 269999999986 48899999999999999999999
Q ss_pred HHHHHHHHhccccccccccccc----cCCCCcEEEEEeeCCEEEEEEEeccccCCCCCceEEeecCCCCchhHHHHHHHH
Q 000135 1773 FLSAVAVLTEVSQISEVIITPE----YNEEGIYTVRFCIQGEWVPVVVDDWIPCESPGKPAFATSKKGHELWVSILEKAY 1848 (2087)
Q Consensus 1773 FLAALAALAE~PrLle~fI~Pe----yNe~GIY~VRL~iNGeWReVVVDDrLPc~~nGKPLFArSsd~nELWpSLLEKAY 1848 (2087)
|||||++|+++|.++++++++. .++.|+|+||||+||+|+.|+|||+||+. +|+|+|++|.+++|+|++||||||
T Consensus 91 llaAla~la~~p~li~~v~p~~q~~~~~~~G~y~~r~~~~G~W~~VvVDD~LP~~-~g~~~f~~s~~~~e~W~~LLEKAy 169 (339)
T 1ziv_A 91 LLAAIASLTLNQKALARVIPQDQSFGPGYAGIFHFQFWQHSEWLDVVIDDRLPTF-RDRLVFLHSADHNEFWSALLEKAY 169 (339)
T ss_dssp HHHHHHHHHTCHHHHHHHSCSSCCSSTTCCSEEEEEEECSSSEEEEEEECCEEES-SSSBSSSBCSSTTBCHHHHHHHHH
T ss_pred HHHHHHHHhcCcccceeEEecCCCcccccceEEEEEEeeCCEEEEEEEcCCCccC-CCceEEEecCCCCchhHHHHHHHH
Confidence 9999999999999888887643 36899999999999999999999999997 499999999999999999999999
Q ss_pred HHhcCCcccccCCChhhhhhhcCCCcceEEeCCchhhhhccchhHHHHHHHHHhcCCCEEEecCCCCC---CccccccCc
Q 000135 1849 AKLHGSYEALEGGLVQDALVDLTGGAGEEIDMRSAQAQIDLASGRLWSQLLRFKQEGFLLGAGSPSGS---DVHISSSGI 1925 (2087)
Q Consensus 1849 AKLhGSYEALeGGnpsEALqDLTGGP~E~IDL~sa~aq~DldsdeLWk~Llkalk~G~LMgcSTPsgS---Deeves~GL 1925 (2087)
||+||||++|.||++.+||+||||++++.+++++. ++++|+.|.++.++|++|+|++.... .+.....||
T Consensus 170 AKl~GsY~~l~gG~~~eal~dLTG~~~~~~~l~~~-------~~~l~~~l~~~~~~g~l~~~~~~~t~~~~~e~~~~~GL 242 (339)
T 1ziv_A 170 AKLNGSYEALKGGSAIEAMEDFTGGVAETFQTKEA-------PENFYEILEKALKRGSLLGCFIDTRSAAESEARTPFGL 242 (339)
T ss_dssp HHHHTSSGGGTTCCHHHHHHHHHSCCCEEEEGGGC-------CTTHHHHHHHHHHHTCEEEEECCCSSGGGTTCBCTTSC
T ss_pred HHHcCCcccccCCCHHHHHHHhhCCceEEEECCCC-------cHHHHHHHHHHHhCCCeEEEEeccCCccchhhhhccCc
Confidence 99999999999999999999999999999998642 45799999999999999999874211 123567899
Q ss_pred ccCceeEEEEEEEE----CCEEEEEEecCCCCCccccCCCCCCCcccch---HHhhhh-cCCCCCCCCeEEEehhhhhhc
Q 000135 1926 VQGHAYSILQVREV----DGHKLVQIRNPWANEVEWNGPWSDSSPEWTD---RMKHKL-KHVPQSKDGIFWMSWQDFQIH 1997 (2087)
Q Consensus 1926 VsGHAYSVLDVrEV----dG~RLVRLRNPWG~~~EWKGdWSD~S~eWTe---eLKkkL-~~~~~sDDGeFWMSfEDFLky 1997 (2087)
+.+|||+|++++++ ++++|||||||||. .||||+|||+|++|++ +.+++| .+ ..+||+|||+|+||++|
T Consensus 243 v~~HaYsVl~v~~v~~~~~~~~Lv~LrNPWg~-~eW~G~wsd~s~~W~~~~~~~~~~l~~~--~~~dG~FWMs~~Df~~~ 319 (339)
T 1ziv_A 243 IKGHAYSVTGIDQVSFRGQRIELIRIRNPWGQ-VEWNGSWSDSSPEWRSVGPAEQKRLCHT--ALDDGEFWMAFKDFKAH 319 (339)
T ss_dssp BTTCCEEEEEEEEEEETTEEEEEEEEECCSSC-CCCCSTTSTTCHHHHHSCHHHHHHTTCC--CCSSSEEEEEHHHHHHH
T ss_pred ccCeeEEEeEEEEEecCCCceEEEEecCCCCC-CccCCCCCcCChhccccCHHHHHHhhCC--CCCCCEEEEEHHHHHHh
Confidence 99999999999998 46899999999996 7999999999999995 567777 43 35999999999999999
Q ss_pred ccceeEeeEcCCCC
Q 000135 1998 FRSIYVCRVYPSEM 2011 (2087)
Q Consensus 1998 FssLyICrL~Pds~ 2011 (2087)
|+.++||++.|+.+
T Consensus 320 F~~l~ic~~~p~~~ 333 (339)
T 1ziv_A 320 FDKVEICNLTPDAL 333 (339)
T ss_dssp CCEEEEECCC----
T ss_pred CCeEEEEEEcCccc
Confidence 99999999998753
No 6
>2qfe_A Calpain-7; C2-like domain, hydrolase, nuclear protein, protease, thiol protease; 1.45A {Homo sapiens}
Probab=98.07 E-value=3.1e-06 Score=87.84 Aligned_cols=46 Identities=28% Similarity=0.660 Sum_probs=40.4
Q ss_pred eeecceeeccCCCCCCCCC-CCCcCCeEEEEecCCCCCCCEEEEEEeccCCc
Q 000135 2013 YSVHGQWRGYSAGGCQDYA-SWNQNPQFRLRASGSDASFPIHVFITLTQSRF 2063 (2087)
Q Consensus 2013 yrVhGeWrGsSAGGc~n~~-SF~~NPQF~LeVtssD~sep~eVlISLsQkr~ 2063 (2087)
.+++|+|++.+||||.++. +|++||||+|++.+ +++|+|+|.|.+.
T Consensus 25 ~~~~G~W~g~tAGGc~n~~~tf~~NPQy~l~l~~-----~~~v~i~L~~~~~ 71 (148)
T 2qfe_A 25 KRINGKWSGQSAGGCGNFQETHKNNPIYQFHIEK-----TGPLLIELRGPRQ 71 (148)
T ss_dssp EEEEEEECGGGCCCCTTCTTTGGGSCCEEEEESS-----CEEEEEEEECCTT
T ss_pred EEEcCEECCCccCCCccccccccCCcEEEEEEcC-----CccEEEEecCCCc
Confidence 4688999999999999995 99999999999973 5899999987654
No 7
>3pvn_A C-reactive protein; pentraxin family, immune system; 1.98A {Homo sapiens} SCOP: b.29.1.5 PDB: 1gnh_A 1lj7_A 3l2y_A 1b09_A 3pvo_A
Probab=97.82 E-value=0.00013 Score=78.41 Aligned_cols=171 Identities=19% Similarity=0.229 Sum_probs=106.4
Q ss_pred hcCCcceEEeeCCCCCccCcccccccccccccceeEEEEEEEeecCC---Cceeee--cccccchhhhheeecccccccc
Q 000135 1399 QTGITGAICVLDDEPTTSGRHCGQIDASICQSQKVSFSIAVMIQPES---GPVCLL--GTEFQKKVCWEILVAGSEQGIE 1473 (2087)
Q Consensus 1399 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 1473 (2087)
|+++.|-+-+...+. -..-..+.+.+=.. -=+|++.+-++++. ++-.+| +++.+. -|+++.+..+
T Consensus 1 ~~~l~gk~l~Fp~~s---~~~yv~l~~~~~~~-l~~fTvc~wv~~~~~~~~~~~lfSy~~~~~~---n~l~l~~~~~--- 70 (206)
T 3pvn_A 1 QTDMSRKAFVFPKES---DTSYVSLKAPLTKP-LKAFTVCLHFYTELSSTRGYSIFSYATKRQD---NEILIFWSKD--- 70 (206)
T ss_dssp CBCCTTEEEEECSCC---SSCEEEECCCCCSC-BSEEEEEEEEEESGGGTCCEEEEEEEETTEE---EEEEEEEETT---
T ss_pred CCCCCCCEEEcCCCC---CCCEEEEecCCCCC-cCCEEEEEEEEecCCCCCcEEEEEEEcCCCC---CEEEEEEcCC---
Confidence 468888888876543 22333444433221 22466666777764 567777 454333 4888866544
Q ss_pred ccceeEEEEEecCCceeeeeeeccccceecCCceEEEEEEEeccccceeeeecccccccccccccccccccccCCceEEe
Q 000135 1474 AGQVGLRLITKGDRQTTVAKDWSISATSIADGRWHIVTMTIDADIGEATCYLDGGFDGYQTGLALSAGNSIWEEGAEVWV 1553 (2087)
Q Consensus 1474 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1553 (2087)
| +++|...|+.. +. . ..+.||+||-|.+|-|..+|+++-|+||-..+. .++ ..+ .....+..+.+
T Consensus 71 -g--~~~l~i~g~~~-~~------~-~~~~~g~W~Hv~~twd~~~G~~~lyvdG~~~~~-~~~--~~g-~~i~~~g~l~l 135 (206)
T 3pvn_A 71 -I--GYSFTVGGSEI-LF------E-VPEVTVAPVHICTSWESASGIVEFWVDGKPRVR-KSL--KKG-YTVGAEASIIL 135 (206)
T ss_dssp -T--EEEEEETTEEE-EE------E-CSSCCSSCEEEEEEEETTTCEEEEEETTEECCC-EEC--CTT-CCBCSSCEEEE
T ss_pred -C--eEEEEECCeEE-EE------e-ccCCCCceEEEEEEEECCCCeEEEEECCEEccc-ccc--cCC-cEECCCCEEEE
Confidence 3 35565544322 22 1 357899999999999999999999999988763 332 111 12345566777
Q ss_pred ecCCCCccccccCCCccccccchhhheehhhcccCChHHHHHHhh
Q 000135 1554 GVRPPTDMDVFGRSDSEGAESKMHIMDVFLWGRCLTEDEIASLYS 1598 (2087)
Q Consensus 1554 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~cLtedEi~~~~~ 1598 (2087)
|-+. |.+|-.-.+...=.=.|=||-||.|.||++||..++.
T Consensus 136 Gq~q----d~~gg~f~~~~~f~G~i~~v~iw~~aLs~~eI~~~~~ 176 (206)
T 3pvn_A 136 GQEQ----DSFGGNFEGSQSLVGDIGNVNMWDFVLSPDEINTIYL 176 (206)
T ss_dssp SSCC----SBTTBCCCGGGCCCEEEEEEEEESSCCCHHHHHHHHH
T ss_pred cccc----ccCCCCcCCccceEEEEeeEEEECccCCHHHHHHHHh
Confidence 8543 4454331111112335779999999999999999986
No 8
>3flp_A SAP-like pentraxin; physiological doubly-stacked heptamer, pentraxin fold, cyclic heptamer, invertebrate lectin, sugar binding protein; 2.30A {Limulus polyphemus} PDB: 3flr_A 3flt_A
Probab=97.82 E-value=0.00019 Score=77.52 Aligned_cols=168 Identities=18% Similarity=0.231 Sum_probs=105.6
Q ss_pred EEEEEEEeecC-CCceeee--cccccchhhhheeeccccccccccceeEEEEEecCCceeeeeeeccccceecCCceEEE
Q 000135 1434 SFSIAVMIQPE-SGPVCLL--GTEFQKKVCWEILVAGSEQGIEAGQVGLRLITKGDRQTTVAKDWSISATSIADGRWHIV 1510 (2087)
Q Consensus 1434 ~~~~~~~~~~~-~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1510 (2087)
+|++.+-++|. +++-.|| +++.|. -|+++.+..++ .|...+++...|..+.. ..+ ...+.||+||.|
T Consensus 33 ~fTvc~wv~~~~~~~~~lfSy~~~~~~---n~l~l~~~~~~--~g~~~~~l~i~g~~~~~----~~~-~~~~~~g~W~Hv 102 (217)
T 3flp_A 33 QLTVCQRIKPFHRNTGYIFSCATSNQD---NQFITSMYVKS--DGTLNLGLQVNASSNKY----ISC-PIEIELGQWYHV 102 (217)
T ss_dssp EEEEEEEEEESCSSCEEEEEEEETTEE---EEEEEEEEECT--TSEEEEEEEETTCCCEE----EEE-EEECCTTSCEEE
T ss_pred cEEEEEEEEecCCCCeeEEEEECCCCC---ceEEEEEeCCC--CcceEEEEEECCcccee----EEc-ccccCCCCEEEE
Confidence 56677777744 4566665 344332 38888776553 34555777777654221 122 235889999999
Q ss_pred EEEEeccccceeeeecccccccccccccccccccccCCceEEeecCCCCccccccCCCccccccchhhheehhhcccCCh
Q 000135 1511 TMTIDADIGEATCYLDGGFDGYQTGLALSAGNSIWEEGAEVWVGVRPPTDMDVFGRSDSEGAESKMHIMDVFLWGRCLTE 1590 (2087)
Q Consensus 1511 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~cLte 1590 (2087)
.+|.|..+|+++-|+||-..+..+++.- +..+..+..+.+|-+. |.+|-+=....-=+=.|=||-||.|.||+
T Consensus 103 ~~t~d~~~G~~~lYvdG~~~~~~~~~~~---g~~i~~~g~l~lG~~~----~~~gg~f~~~~~f~G~i~~v~iw~~aLs~ 175 (217)
T 3flp_A 103 CHVWSGVDGRMAVYANGSPCGTMENVGK---GHQISAGGTVVIGQEQ----DKIGGGFEEQESWSGELSDLQVWDEALTT 175 (217)
T ss_dssp EEEEETTTTEEEEEETTEEEEEESCSST---TCCBCSCBEEEESSCC----SBTTBCCCGGGCCCEEEEEEEEESSCCCH
T ss_pred EEEEECCCCEEEEEECCEEecceecccc---CcEECCCCEEEeCCcc----cCCCCccCCCCceEEEEeeEEEECccCCH
Confidence 9999999999999999988764333321 1123345566777543 34443211111123357899999999999
Q ss_pred HHHHHHhh-cccccccccccCCCCCcccC
Q 000135 1591 DEIASLYS-AICSAELNMNEFPEDNWQWA 1618 (2087)
Q Consensus 1591 dEi~~~~~-~~~~aey~~~d~~dd~WQ~~ 1618 (2087)
+||..++. ..+..+=++++-.+..|+..
T Consensus 176 ~eI~~l~~c~~~~~~Gnv~~W~~~~~~~~ 204 (217)
T 3flp_A 176 HQVSTVASCNGIRPRGNVISWMEDSFVAD 204 (217)
T ss_dssp HHHHHHHCTTSCCCCCSSEETTTSCEEEE
T ss_pred HHHHHHHhCCCCCCCCCEEccccCeEEec
Confidence 99999986 11223456666666666655
No 9
>3kqr_A Serum amyloid P-component; glycoprotein, disulfide bond, lectin, metal-binding secreted; HET: NAG; 1.50A {Homo sapiens} SCOP: b.29.1.5 PDB: 1lgn_A* 1gyk_A 2a3w_A* 2a3x_A* 2a3y_A* 1sac_A* 3d5o_A* 2w08_A*
Probab=97.78 E-value=0.00016 Score=77.89 Aligned_cols=171 Identities=18% Similarity=0.234 Sum_probs=103.2
Q ss_pred hcCCcceEEeeCCCCCccCcccccccccccccceeEEEEEEEeecCC-Cceeee--cccccchhhhheeecccccccccc
Q 000135 1399 QTGITGAICVLDDEPTTSGRHCGQIDASICQSQKVSFSIAVMIQPES-GPVCLL--GTEFQKKVCWEILVAGSEQGIEAG 1475 (2087)
Q Consensus 1399 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 1475 (2087)
|+++.|-+-+...+..+. =-.+.+.+=. .-=+|++.+-++++. ++-.+| +++.+.+ |+++.+..+ |
T Consensus 1 ~~~l~gk~l~Fp~~s~~~---yv~l~~~~~~-~l~~fTvc~wv~~~~~~~~tlfSy~~~~~~n---el~l~~~~~----~ 69 (204)
T 3kqr_A 1 HTDLSGKVFVFPRESVTD---HVNLITPLEK-PLQNFTLCFRAYSDLSRAYSLFSYNTQGRDN---ELLVYKERV----G 69 (204)
T ss_dssp CCCCTTEEEEECSCCSSC---EEEEECCCCS-CBSEEEEEEEEECCCCSCEEEEEEEETTEEE---EEEEEEEET----T
T ss_pred CCCCCCCEEEcCCCCCCC---EEEEeCCCCC-CcCCEEEEEEEEeCCCCCeEEEEEECCCCCc---eEEEEEcCC----C
Confidence 467777777776543211 1122222111 012466666667664 455665 6654443 888865432 3
Q ss_pred ceeEEEEEecCCceeeeeeeccccceecCCceEEEEEEEeccccceeeeecccccccccccccccccccccCCceEEeec
Q 000135 1476 QVGLRLITKGDRQTTVAKDWSISATSIADGRWHIVTMTIDADIGEATCYLDGGFDGYQTGLALSAGNSIWEEGAEVWVGV 1555 (2087)
Q Consensus 1476 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1555 (2087)
.++|...|+.. +. . ..+.||+||-|.+|-|..+|++.-|+||-..+. +++. . +.....+..+.+|-
T Consensus 70 --~~~l~i~g~~~-~~------~-~~~~~g~W~Hv~~twd~~~G~~~lyvdG~~~~~-~~~~--~-g~~i~~~g~l~lGq 135 (204)
T 3kqr_A 70 --EYSLYIGRHKV-TS------K-VIEKFPAPVHICVSWESSSGIAEFWINGTPLVK-KGLR--Q-GYFVEAQPKIVLGQ 135 (204)
T ss_dssp --EEEEEETTEEE-EE------E-CCCCSSCCEEEEEEEETTTCEEEEEETTEECCC-EECC--T-TCCBCSSCEEEESS
T ss_pred --eEEEEECCeEE-EE------e-cccCCCceEEEEEEEECCCCeEEEEECCEEeee-eccC--C-CCEECCCcEEEEcc
Confidence 35666654322 22 1 468899999999999999999999999987763 2221 1 11234455666775
Q ss_pred CCCCccccccCCCccccccchhhheehhhcccCChHHHHHHhh
Q 000135 1556 RPPTDMDVFGRSDSEGAESKMHIMDVFLWGRCLTEDEIASLYS 1598 (2087)
Q Consensus 1556 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~cLtedEi~~~~~ 1598 (2087)
+. |.+|-.-.+..-=.=.|=||-||.|.||++||..++.
T Consensus 136 ~q----d~~gg~f~~~~~f~G~i~~v~iW~~aLs~~eI~~l~~ 174 (204)
T 3kqr_A 136 EQ----DSYGGKFDRSQSFVGEIGDLYMWDSVLPPENILSAYQ 174 (204)
T ss_dssp CC----SSSSCCCCGGGCCCEEEEEEEEESSCCCHHHHHHHHH
T ss_pred cc----cCCCCCcCcccceeEEEeeEEEECccCCHHHHHHHHh
Confidence 43 4444321111112335779999999999999999987
No 10
>4dqa_A Uncharacterized protein; two domains structure, DUF 1735, laminin_G_3 concanavalin A- lectin/glucanases superfamily domain; HET: MSE; 1.50A {Bacteroides ovatus}
Probab=97.07 E-value=0.0021 Score=74.49 Aligned_cols=135 Identities=16% Similarity=0.243 Sum_probs=84.9
Q ss_pred EEEEEEEeecCCCc--eeeecccccchhhhheeeccccccc---cccceeEEEEEecCCceeeeeeeccccceecCCceE
Q 000135 1434 SFSIAVMIQPESGP--VCLLGTEFQKKVCWEILVAGSEQGI---EAGQVGLRLITKGDRQTTVAKDWSISATSIADGRWH 1508 (2087)
Q Consensus 1434 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1508 (2087)
+|++.+.|.|++.+ -.|+|.| . +|++--...+. +.+|.-+ ++..+ ..+.+.+.+|+||
T Consensus 162 ~~T~eawv~~~~~~~~~ti~g~e--~----~~~lr~gd~~~g~~~~~~Lq~----~~~~~-------~~s~~~l~~g~W~ 224 (355)
T 4dqa_A 162 SFTYEALINVDYFLDNNTIMGTE--G----VMILRIGDAGGGITPKDYLEV----AGGQN-------YRVTKPLLTNRWY 224 (355)
T ss_dssp SEEEEEEEEESCCCSSEEEEEET--T----TEEEEEEEGGGTSEEEEEEEE----EESSC-------EECSSCCCSSCEE
T ss_pred cEEEEEEEECCcCCCcceEEeCC--C----eEEEEEecCCCCCCcCCeEEE----ecCCc-------cccCCcccCCCEE
Confidence 67888889998764 4456644 1 33333333333 5555433 22221 2255689999999
Q ss_pred EEEEEEeccccceeeeecccccccccc--cccccccccccCCceEEeecCCCCccccccCCCccccccchhhheehhhcc
Q 000135 1509 IVTMTIDADIGEATCYLDGGFDGYQTG--LALSAGNSIWEEGAEVWVGVRPPTDMDVFGRSDSEGAESKMHIMDVFLWGR 1586 (2087)
Q Consensus 1509 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1586 (2087)
.|++|.|++.|+.+.|+||-..+.... -++.. .....+++|-++-- .|+ ... -+-.|=||=+|.|
T Consensus 225 HvA~t~d~~~~~~~lYvNG~~~~~~~~~~~~~~~-----~~~~~l~IG~~~~~---~~~---~~~--f~G~IdevrIw~~ 291 (355)
T 4dqa_A 225 HVALTYDQPTGKTGIYVNGEKWAGSDWGIDGFDP-----NSDMGFYIGRIYGF---KWG---ERP--FHGKMSEVRVWSV 291 (355)
T ss_dssp EEEEEEETTTTEEEEEETTEEEEEEECCCCCBCT-----TSTTCEEESCCTTC---TTC---CCC--CEEEEEEEEEESS
T ss_pred EEEEEEECCCCEEEEEECCEEEEEEecCCCcccc-----CCCceEEECCCCCC---CCC---Ccc--eeEEEEEEEEECC
Confidence 999999999999999999998886542 11211 12345777765311 111 111 1234668999999
Q ss_pred cCChHHHHHHhh
Q 000135 1587 CLTEDEIASLYS 1598 (2087)
Q Consensus 1587 cLtedEi~~~~~ 1598 (2087)
+||++||+..+.
T Consensus 292 aLs~~eI~~~~~ 303 (355)
T 4dqa_A 292 ARTENQLKQNML 303 (355)
T ss_dssp CCCHHHHHHTTT
T ss_pred cCCHHHHHHHhh
Confidence 999999987543
No 11
>1za4_A Thrombospondin 1; TSP-1, NTSP-1, HBD, arixtra, cell adhesion; HET: SGN; 1.90A {Homo sapiens} SCOP: b.29.1.4 PDB: 2ouh_A 2ouj_A
Probab=93.81 E-value=0.25 Score=55.20 Aligned_cols=114 Identities=16% Similarity=0.257 Sum_probs=64.5
Q ss_pred eEEEEEEEeecCCCce-eeecccccc--hhhhheeeccccccccccceeEEEEEecCCceeeeeeeccccceecCCceEE
Q 000135 1433 VSFSIAVMIQPESGPV-CLLGTEFQK--KVCWEILVAGSEQGIEAGQVGLRLITKGDRQTTVAKDWSISATSIADGRWHI 1509 (2087)
Q Consensus 1433 ~~~~~~~~~~~~~~~~-~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1509 (2087)
=.||+.+.++|..+-- .||..+-.. ..=+|+-+-|.. ..+-+..-+.|..++.+.+ ...++||+||.
T Consensus 72 ~eFsil~tlr~~~~~~g~LfsI~~~~g~~~ql~l~~~G~~-----~~l~~~Y~~~g~~~~~~f~-----~~~L~Dg~WH~ 141 (251)
T 1za4_A 72 KGFLLLASLRQMKKTRGTLLALERKDHSGQVFSVVSNGKA-----GTLDLSLTVQGKQHVVSVE-----EALLATGQWKS 141 (251)
T ss_dssp TEEEEEEEEEECTTCEEEEEEEEETTSSCEEEEEEEETTT-----TEEEEEEEETTEEEEEEES-----SCCCCSSSCEE
T ss_pred CcEEEEEEEEecCCCCeEEEEEEeCCCCEEEEEEEECCCC-----cEEEEEEEcCCCeeeEEEe-----cccccCCCEEE
Confidence 4577777777666544 566433321 112333222211 1233444333444443332 24689999999
Q ss_pred EEEEEeccccceeeeecccccccccccccccccc---cccCCceEEeecCCCC
Q 000135 1510 VTMTIDADIGEATCYLDGGFDGYQTGLALSAGNS---IWEEGAEVWVGVRPPT 1559 (2087)
Q Consensus 1510 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~ 1559 (2087)
+++.|+. +.++-|+|...-..+. +..+...- .-+.|..+|+|-|..-
T Consensus 142 lalsV~~--~~VtLyvDC~~~~~~~-l~~~~~~i~~~~~~~~~~~~iGq~~~~ 191 (251)
T 1za4_A 142 ITLFVQE--DRAQLYIDCEKMENAE-LDVPIQSVFTRDLASIARLRIAKGGVN 191 (251)
T ss_dssp EEEEEET--TEEEEEETTSCCEEEE-CSSCGGGTSCTTGGGTEEEEESCCSTT
T ss_pred EEEEEEC--CEEEEEECCcccceee-ccCccccccccccCCCcEEEEEecCCC
Confidence 9999987 6799999998744322 11222221 1334789999998764
No 12
>2v73_A CBM40, putative EXO-alpha-sialidase; carbohydrate-binding module, bacterial pathogen, sialic acid, sugar-binding protein; HET: SIA; 2.2A {Clostridium perfringens}
Probab=91.90 E-value=0.5 Score=51.80 Aligned_cols=143 Identities=13% Similarity=0.103 Sum_probs=86.5
Q ss_pred EEEEEEEeecC-CCceeeecccccchhhhheeeccccccccccceeEEEEEecCCce----eeeeeeccccceecCCceE
Q 000135 1434 SFSIAVMIQPE-SGPVCLLGTEFQKKVCWEILVAGSEQGIEAGQVGLRLITKGDRQT----TVAKDWSISATSIADGRWH 1508 (2087)
Q Consensus 1434 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~ 1508 (2087)
++++++-.-++ +++--||+.--.|+ =|+-+-.- |+.|.+|+-+--.+..+- +.+.-| .++.||
T Consensus 41 ~gTI~v~fks~~~~~q~LfSIsN~k~-~n~yf~ly----i~~g~lg~e~R~~~~~~~~~~~~~a~v~-------~~~~wn 108 (191)
T 2v73_A 41 EGTIVTRFNMNDTSIQSLIGLSDGNK-ANNYFSLY----VSGGKVGYELRRQEGNGDFNVHHSADVT-------FNRGIN 108 (191)
T ss_dssp SEEEEEEEEECCCSCEEEEEEECTTC-SSCEEEEE----ECSSEEEEEEEECTTSSCEEEEEEEECC-------CCSSCE
T ss_pred CcEEEEEEecCCCcceEEEEccCCCC-ccceEEEE----EeCCEEEEEEecCCCceeeeeeccccee-------cCCceE
Confidence 45666655444 55678999888887 45544433 446677777665333222 222222 456999
Q ss_pred EEEEEEeccccceeeeecccccccccccccccccccccCCceEEeecCCCCccccccCC-Cccccccchhhheehhhccc
Q 000135 1509 IVTMTIDADIGEATCYLDGGFDGYQTGLALSAGNSIWEEGAEVWVGVRPPTDMDVFGRS-DSEGAESKMHIMDVFLWGRC 1587 (2087)
Q Consensus 1509 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~c 1587 (2087)
+||+++|. ++..+-|+||---..+.---...-+.| +.+ .+=+| ++-|. .+..--.+-+|=++=+|-|+
T Consensus 109 tvaf~~d~-~~~~~ly~NG~~V~t~~~~~~~fi~~i-~ln-~~~IG--------~~~r~sg~~~y~F~G~Id~~~iYn~a 177 (191)
T 2v73_A 109 TLALKIEK-GIGAKIFLNGSLVKTVSDPNIKFLNAI-NLN-SGFIG--------KTDRANGYNEYLFRGNIDFMNIYDKP 177 (191)
T ss_dssp EEEEEEET-TTEEEEEETTEEEEEEECTTCCCGGGS-CCC-EEEES--------SCCCCSSSCCCCCCEEEEEEEEESSC
T ss_pred EEEEEEcC-CccEEEEECCEEEEEEecccccceeec-CCc-eEEEc--------ceeecCCceeeccCCeEEEEEEEcCc
Confidence 99999999 889999999976655521111111222 211 22222 23332 22223356667778889999
Q ss_pred CChHHHHHHhhc
Q 000135 1588 LTEDEIASLYSA 1599 (2087)
Q Consensus 1588 LtedEi~~~~~~ 1599 (2087)
||+|||..+|+-
T Consensus 178 Ls~eEi~~lt~~ 189 (191)
T 2v73_A 178 VSDNYLLRKTGE 189 (191)
T ss_dssp CCHHHHHHHHGG
T ss_pred CCHHHHHHhhcC
Confidence 999999999973
No 13
>1a8d_A Tetanus neurotoxin; clostridial, ganglioside binding region; 1.57A {Clostridium tetani} SCOP: b.29.1.6 b.42.4.2 PDB: 1af9_A 1fv3_A* 1fv2_A* 3hmy_A* 3hn1_A* 1d0h_A* 1dfq_A* 1dll_A* 1yxw_A* 1yyn_A* 1diw_A*
Probab=91.60 E-value=0.29 Score=59.07 Aligned_cols=141 Identities=16% Similarity=0.315 Sum_probs=77.3
Q ss_pred EEEEEEEeecCCC---c--------eeeecccccc----hhhhheeeccccccccccceeEEEEEec---CCceeeeeee
Q 000135 1434 SFSIAVMIQPESG---P--------VCLLGTEFQK----KVCWEILVAGSEQGIEAGQVGLRLITKG---DRQTTVAKDW 1495 (2087)
Q Consensus 1434 ~~~~~~~~~~~~~---~--------~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~ 1495 (2087)
+||++.-+--... | --|+|.--.. ..+|+|-.=|.+ |..-.+- ..+..+-+.=
T Consensus 86 dFSISFWvK~~k~~~~~i~~~~~~e~TIin~k~~n~~s~nsGW~I~l~gn~---------liw~l~Dsng~~~~i~f~~~ 156 (452)
T 1a8d_A 86 NFTVSFWLRVPKVSASHLEQYGTNEYSIISSMKKHSLSIGSGWSVSLKGNN---------LIWTLKDSAGEVRQITFRDL 156 (452)
T ss_dssp CEEEEEEEECCCCCHHHHHHHTTCEEEEEECCEECGGGCEEEEEEEEETTE---------EEEEEECTTSCEEEEEEECC
T ss_pred ceEEEEEEECCCcCcccccccccCcceEEeeeccccccCCCCeEEEeCCCe---------EEEEEEcCCCceeeEEeccc
Confidence 7888888876543 1 3566654333 567888553322 3332221 1122221111
Q ss_pred ccccceecCCceEEEEEEEeccccceeeeecccccccccccccccccccccCCceEEeecCCCCccccccCCCccccccc
Q 000135 1496 SISATSIADGRWHIVTMTIDADIGEATCYLDGGFDGYQTGLALSAGNSIWEEGAEVWVGVRPPTDMDVFGRSDSEGAESK 1575 (2087)
Q Consensus 1496 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1575 (2087)
..+.+.+.||+||-||||+|.+ |+++-|+||-.-+.+. +..-+.|-.. ...=+|+ |.++- . -..
T Consensus 157 ~~~Isd~~~nkW~fVtItvDR~-g~~~IYING~Lv~s~~---It~lG~I~ss-~~i~~gi------~~~~d---~--~~~ 220 (452)
T 1a8d_A 157 PDKFNAYLANKWVFITITNDRL-SSANLYINGVLMGSAE---ITGLGAIRED-NNITLKL------DRCNN---N--NQY 220 (452)
T ss_dssp SBTTSCSSSSSCEEEEEEECTT-SEEEEEETTEEEEEEE---CTTCCCCCCC-SEEEEEE------ESCCC---T--TCE
T ss_pred cccCccccCCeEEEEEEEECCC-CCEEEEECCEEeeccc---hhhccceeec-CeEEEEE------cccCC---C--ccc
Confidence 2344445589999999999986 5559999997655441 1111122221 1112221 11110 1 112
Q ss_pred hhhheehhhcccCChHHHHHHhhc
Q 000135 1576 MHIMDVFLWGRCLTEDEIASLYSA 1599 (2087)
Q Consensus 1576 ~~~~~~~~~~~cLtedEi~~~~~~ 1599 (2087)
+.|=++-+..|+||++||..+|+.
T Consensus 221 ~~IDef~Iynk~Lt~~EI~~LY~~ 244 (452)
T 1a8d_A 221 VSIDKFRIFCKALNPKEIEKLYTS 244 (452)
T ss_dssp EEEEEEEEESSCCCHHHHHHHHHT
T ss_pred ceEeeEEEecccCCHHHHHHHHhc
Confidence 245567789999999999999993
No 14
>2erf_A Thrombospondin-1; TSP-1, N-terminal TSPN, HBD, sugar binding protein; 1.45A {Homo sapiens} SCOP: b.29.1.4 PDB: 2es3_A 1z78_A
Probab=89.88 E-value=0.88 Score=49.32 Aligned_cols=114 Identities=16% Similarity=0.250 Sum_probs=62.3
Q ss_pred eEEEEEEEeecCCC-ceeeecccccc--hhhhheeeccccccccccceeEEEEEecCCceeeeeeeccccceecCCceEE
Q 000135 1433 VSFSIAVMIQPESG-PVCLLGTEFQK--KVCWEILVAGSEQGIEAGQVGLRLITKGDRQTTVAKDWSISATSIADGRWHI 1509 (2087)
Q Consensus 1433 ~~~~~~~~~~~~~~-~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1509 (2087)
=.||+.+.+++.++ +-.||...... +.=+|+-+-|.. ..+-+..-+.|..|+.... ...++||+||.
T Consensus 62 ~eFsi~~t~r~~~~~~~~LfsI~~~~~~~~ql~l~l~g~~-----~~l~~~y~~~g~~~~~~f~-----~v~l~dg~WH~ 131 (209)
T 2erf_A 62 KGFLLLASLRQMKKTRGTLLALERKDHSGQVFSVVSNGKA-----GTLDLSLTVQGKQHVVSVE-----EALLATGQWKS 131 (209)
T ss_dssp TEEEEEEEEEECTTCEEEEEEEEETTSSCEEEEEEEETTT-----TEEEEEEEETTEEEEEEES-----SCCCCSSSEEE
T ss_pred CCEEEEEEEEcCCCCCceEEEEEcCCCCEEEEEEEEcCCC-----CEEEEEEcCCCCEEEEEEe-----ccccCCCcEEE
Confidence 45777776665543 23455433322 333343333322 1233433233433332211 34599999999
Q ss_pred EEEEEeccccceeeeecccccccccccccccccc---cccCCceEEeecCCCC
Q 000135 1510 VTMTIDADIGEATCYLDGGFDGYQTGLALSAGNS---IWEEGAEVWVGVRPPT 1559 (2087)
Q Consensus 1510 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~ 1559 (2087)
+++.|.. ..++-|+|...-..+. +.-+...- .-+.+..+|+|-|..-
T Consensus 132 l~l~V~~--~~v~L~vDC~~~~~~~-l~~~~~~~~~~~~~~~~~~~iGq~~~~ 181 (209)
T 2erf_A 132 ITLFVQE--DRAQLYIDCEKMENAE-LDVPIQSVFTRDLASIARLRIAKGGVN 181 (209)
T ss_dssp EEEEEET--TEEEEEETTTEEEEEE-CSSCGGGTCCTTHHHHEEEEESCCTTT
T ss_pred EEEEEEC--CEEEEEEcCeEeEeEE-ccCCchhccccccCCceEEEEecCCCC
Confidence 9999987 5699999998754332 22222221 1223778999988764
No 15
>3sh4_A LG3 peptide; actin disassambly, integrin alpha12 BETA1, metal binding Pro; 1.50A {Homo sapiens} PDB: 3sh5_A
Probab=84.96 E-value=1.8 Score=45.64 Aligned_cols=76 Identities=22% Similarity=0.334 Sum_probs=47.3
Q ss_pred ccccceeEEEEEecCCceeeeeeeccccceecCCceEEEEEEEeccccceeeeecccccccccccccccccccccCCceE
Q 000135 1472 IEAGQVGLRLITKGDRQTTVAKDWSISATSIADGRWHIVTMTIDADIGEATCYLDGGFDGYQTGLALSAGNSIWEEGAEV 1551 (2087)
Q Consensus 1472 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1551 (2087)
|..|++-+++ .-|.+..++. +...+.||+||.|+++.+. .+++-++||...-. ...+......+....+
T Consensus 68 L~~G~l~~~~-~~G~g~~~~~-----s~~~l~Dg~WH~V~v~r~~--~~~~L~VD~~~~~~---~~~~~~~~~l~~~~~l 136 (195)
T 3sh4_A 68 LQDGHLVFRY-QLGSGEARLV-----SEDPINDGEWHRVTALREG--RRGSIQVDGEELVS---GRSPGPNVAVNAKGSV 136 (195)
T ss_dssp EETTEEEEEE-ECSSCEEEEE-----EEEECCSSSCEEEEEEEET--TEEEEEETTCCCEE---EECCSSCCCCCCCSCE
T ss_pred EeCCEEEEEE-ECCCCcEEEE-----cCceeCCCCeEEEEEEEeC--CEEEEEECCeeeee---eeCCCCcccccCCCCE
Confidence 5677777764 4455554442 3578999999999998875 46678899864321 1122222334445567
Q ss_pred EeecCCC
Q 000135 1552 WVGVRPP 1558 (2087)
Q Consensus 1552 ~~~~~~~ 1558 (2087)
++|=-|.
T Consensus 137 yvGG~p~ 143 (195)
T 3sh4_A 137 YIGGAPD 143 (195)
T ss_dssp EESCCTT
T ss_pred EECCCCC
Confidence 7776553
No 16
>1f5f_A SHBG, sex hormone-binding globulin; jellyroll, signaling protein; HET: DHT; 1.70A {Homo sapiens} SCOP: b.29.1.4 PDB: 1lhw_A* 1lho_A* 1lhn_A* 1lhv_A* 1lhu_A*
Probab=84.44 E-value=1.5 Score=46.58 Aligned_cols=52 Identities=29% Similarity=0.458 Sum_probs=38.3
Q ss_pred cccccceeEEEEEecCCceeeeeeeccccceecCCceEEEEEEEeccccceeeeeccccc
Q 000135 1471 GIEAGQVGLRLITKGDRQTTVAKDWSISATSIADGRWHIVTMTIDADIGEATCYLDGGFD 1530 (2087)
Q Consensus 1471 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1530 (2087)
.|+.|++=++.-. |.++.++ -+...+.||+||.|+++.+.. +++-.+||.-.
T Consensus 70 ~L~~G~l~~~~~~-g~~~~~~-----~s~~~vnDG~WH~V~v~r~~~--~~~L~VD~~~~ 121 (205)
T 1f5f_A 70 GLRDGRPEIQLHN-HWAQLTV-----GAGPRLDDGRWHQVEVKMEGD--SVLLEVDGEEV 121 (205)
T ss_dssp EEETTEEEEEEES-SSCEEEE-----ECSCCCCSSSCEEEEEEEETT--EEEEEETTEEE
T ss_pred EEECCEEEEEEEC-CCceEEE-----ecCCccCCCCCEEEEEEEeCC--EEEEEECCeee
Confidence 4778888887764 5555444 235679999999999998864 57778898653
No 17
>3v64_A Low-density lipoprotein receptor-related protein; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus} PDB: 3v65_A
Probab=83.95 E-value=2.1 Score=45.03 Aligned_cols=77 Identities=17% Similarity=0.301 Sum_probs=48.3
Q ss_pred ccccceeEEEEEecCCceeeeeeeccccceecCCceEEEEEEEeccccceeeeecccccccccccccccccccccCCceE
Q 000135 1472 IEAGQVGLRLITKGDRQTTVAKDWSISATSIADGRWHIVTMTIDADIGEATCYLDGGFDGYQTGLALSAGNSIWEEGAEV 1551 (2087)
Q Consensus 1472 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1551 (2087)
|..|++-+++- -|.+..++. +...+.||+||.|+++.+. .+++-++||...- .+ ..+.....-+....+
T Consensus 69 L~~G~l~~~~~-~G~~~~~l~-----s~~~v~Dg~WH~V~v~r~~--~~~~L~VD~~~~~--~~-~~~~~~~~l~~~~~l 137 (191)
T 3v64_A 69 IVDGHLQLSYD-LGSQPVVLR-----STVKVNTNRWLRIRAHREH--REGSLQVGNEAPV--TG-SSPLGATQLDTDGAL 137 (191)
T ss_dssp EETTEEEEEEE-SSSCCEEEE-----EEEECTTSSCEEEEEEEET--TEEEEEETTSCCE--EE-ECCTTCCCEEECSEE
T ss_pred EECCEEEEEEE-CCCccEEEe-----cCccccCCCCEEEEEEEeC--CEEEEEECCeeeE--eE-ECCCCcceeccCCce
Confidence 45677777663 355544432 2457999999999999875 4678899986321 11 122233334455678
Q ss_pred EeecCCCC
Q 000135 1552 WVGVRPPT 1559 (2087)
Q Consensus 1552 ~~~~~~~~ 1559 (2087)
++|=-|+.
T Consensus 138 ylGG~p~~ 145 (191)
T 3v64_A 138 WLGGLQKL 145 (191)
T ss_dssp EESCCSSC
T ss_pred EEcccCcc
Confidence 88877764
No 18
>1d2s_A SHBG, sex hormone-binding globulin; steroid transport, laminin G-like domain, jellyroll, androgen binding protein (ABP); HET: DHT; 1.55A {Homo sapiens} SCOP: b.29.1.4 PDB: 1kdk_A* 1kdm_A*
Probab=82.79 E-value=1.3 Score=46.03 Aligned_cols=51 Identities=29% Similarity=0.487 Sum_probs=37.5
Q ss_pred cccccceeEEEEEecCCceeeeeeeccccceecCCceEEEEEEEeccccceeeeecccc
Q 000135 1471 GIEAGQVGLRLITKGDRQTTVAKDWSISATSIADGRWHIVTMTIDADIGEATCYLDGGF 1529 (2087)
Q Consensus 1471 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1529 (2087)
.|+.|++=++.- .|.++.++ .+...+.||+||.|+++.+.. +++-.+||.-
T Consensus 58 ~L~~G~l~~~~~-~g~~~~~~-----~s~~~vnDG~WH~V~v~~~~~--~~~L~VD~~~ 108 (170)
T 1d2s_A 58 GLRDGRPEIQLH-NHWAQLTV-----GAGPRLDDGRWHQVEVKMEGD--SVLLEVDGEE 108 (170)
T ss_dssp EEETTEEEEEEE-SSSCEEEE-----ECSCCCCSSSCEEEEEEEETT--EEEEEETTEE
T ss_pred EEeCCEEEEEEE-CCCceEEE-----eCCCccCCCCCEEEEEEEeCC--EEEEEECCee
Confidence 478899888864 46655444 235679999999999988764 5777888754
No 19
>1pz7_A Agrin; structural protein; 1.42A {Gallus gallus} SCOP: b.29.1.4 PDB: 1pz8_A 1pz9_A 1q56_A
Probab=82.09 E-value=2.5 Score=44.76 Aligned_cols=77 Identities=17% Similarity=0.253 Sum_probs=48.2
Q ss_pred ccccceeEEEEEecCCceeeeeeeccccceecCCceEEEEEEEeccccceeeeecccccccccccccccccccccCCceE
Q 000135 1472 IEAGQVGLRLITKGDRQTTVAKDWSISATSIADGRWHIVTMTIDADIGEATCYLDGGFDGYQTGLALSAGNSIWEEGAEV 1551 (2087)
Q Consensus 1472 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1551 (2087)
|..|++=++. ..|.+.+++. +...+.||+||.|+++.+.. +++-++||.-.. .+. .+.....-+....+
T Consensus 82 L~~G~l~~~~-~~G~g~~~v~-----s~~~lnDg~WH~V~v~r~~~--~~~L~VD~~~~~--~~~-~~~~~~~l~~~~~l 150 (204)
T 1pz7_A 82 IVDGFVQMMY-DLGSKPVVLR-----STVPINTNHWTHIKAYRVQR--EGSLQVGNEAPI--TGS-SPLGATQLDTDGAL 150 (204)
T ss_dssp EETTEEEEEE-ESSSCCEEEE-----EEEECCSSSCEEEEEEEETT--EEEEEETTSCCE--EEE-CCSSCCCEEECCEE
T ss_pred EECCEEEEEE-ECCCCeEEEE-----CCcccCCCCeEEEEEEEeCC--EEEEEECCcceE--EEE-CCCCCceEcCCCCE
Confidence 4567776664 4566555442 34689999999999999865 567789986422 111 12222223345678
Q ss_pred EeecCCCC
Q 000135 1552 WVGVRPPT 1559 (2087)
Q Consensus 1552 ~~~~~~~~ 1559 (2087)
++|=-|..
T Consensus 151 ylGG~p~~ 158 (204)
T 1pz7_A 151 WLGGMERL 158 (204)
T ss_dssp EESSCSCC
T ss_pred EEecCCCc
Confidence 99987764
No 20
>3qcw_A Neurexin-1-alpha; synaptic adhesion molecule, cell adhesion; HET: NAG; 2.65A {Bos taurus} PDB: 3r05_A* 3poy_A*
Probab=81.87 E-value=8.8 Score=51.03 Aligned_cols=50 Identities=30% Similarity=0.520 Sum_probs=34.8
Q ss_pred ccccceeEEEEEecCCceeeeeeeccccceecCCceEEEEEEEeccccceeeeeccc
Q 000135 1472 IEAGQVGLRLITKGDRQTTVAKDWSISATSIADGRWHIVTMTIDADIGEATCYLDGG 1528 (2087)
Q Consensus 1472 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1528 (2087)
|+.|++-++.-. |.+..++. .....++||+||.|+++-. -++++-++||.
T Consensus 1115 l~~G~l~~~~~~-g~~~~~~~----~~~~~v~DG~wH~V~i~r~--~~~~~l~VD~~ 1164 (1245)
T 3qcw_A 1115 IHQGKIGVKFNV-GTDDIAIE----ESNAIINDGKYHVVRFTRS--GGNATLQVDSW 1164 (1245)
T ss_dssp EETTEEEEEEES-SSCCEEEE----CCSCCCBSSSCEEEEEEEE--TTEEEEEETTS
T ss_pred EECCEEEEEEEC-CCCceEEe----cCCcEecCCCeEEEEEEEC--CCEEEEEECCe
Confidence 567888777643 32222221 3466799999999998876 66789999985
No 21
>3pve_A Agrin, AGRN protein; mRNA splicing, structural genomics, PSI-2, protein structure initiative; 1.40A {Mus musculus}
Probab=81.46 E-value=3.3 Score=43.41 Aligned_cols=77 Identities=17% Similarity=0.264 Sum_probs=48.7
Q ss_pred ccccceeEEEEEecCCceeeeeeeccccceecCCceEEEEEEEeccccceeeeecccccccccccccccccccccCCceE
Q 000135 1472 IEAGQVGLRLITKGDRQTTVAKDWSISATSIADGRWHIVTMTIDADIGEATCYLDGGFDGYQTGLALSAGNSIWEEGAEV 1551 (2087)
Q Consensus 1472 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1551 (2087)
|..|++-+++- -|.+..++ + +...+.||+||.|+++.+. .+++-++||...- .+ ..+......+....+
T Consensus 69 L~~G~l~~~~~-~G~g~~~l-~----s~~~l~Dg~WH~V~v~r~~--~~~~L~VD~~~~~--~~-~~~~~~~~l~~~~~l 137 (189)
T 3pve_A 69 LHNRHLEFRYD-LGKGAAII-R----SKEPIALGTWVRVFLERNG--RKGALQVGDGPRV--LG-ESPVPHTMLNLKEPL 137 (189)
T ss_dssp EETTEEEEEEE-SSSCEEEE-E----CSSCCCTTSEEEEEEEEET--TEEEEEETTSCCE--EE-ECCSSCCCCCCCSCE
T ss_pred EECCEEEEEEe-cCCCCEEE-E----cCcccCCCCEEEEEEEEeC--CEEEEEECCceeE--eE-EcCCCcceecCCCCE
Confidence 66788777754 35554433 2 4568999999999998875 4568889987431 11 122223334445668
Q ss_pred EeecCCCC
Q 000135 1552 WVGVRPPT 1559 (2087)
Q Consensus 1552 ~~~~~~~~ 1559 (2087)
.+|--|+.
T Consensus 138 yvGG~p~~ 145 (189)
T 3pve_A 138 YVGGAPDF 145 (189)
T ss_dssp EESCCSCG
T ss_pred EECCcCch
Confidence 88876643
No 22
>2sli_A Intramolecular trans-sialidase; hydrolase, neuraminidase; HET: SKD; 1.80A {Macrobdella decora} SCOP: b.29.1.9 b.68.1.1 PDB: 1sll_A 1sli_A* 3sli_A* 4sli_A*
Probab=81.12 E-value=6 Score=49.93 Aligned_cols=148 Identities=17% Similarity=0.205 Sum_probs=84.4
Q ss_pred EEEEEEeecCC--Cceeeecccccch--hhhheeeccccccccccceeEEEEE-ecCCceeeeeeeccccceecCC--ce
Q 000135 1435 FSIAVMIQPES--GPVCLLGTEFQKK--VCWEILVAGSEQGIEAGQVGLRLIT-KGDRQTTVAKDWSISATSIADG--RW 1507 (2087)
Q Consensus 1435 ~~~~~~~~~~~--~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~--~~ 1507 (2087)
|++++-+-|++ +.--||+.--.|+ .|.=|-+.=. ..|.+|+-+-- +|....++.+--+|.. .-.| .|
T Consensus 37 ~Ti~~~~~~~~~~~~~~lfs~s~~~~~~~~~~~~~~i~----~~g~~~~~~r~~~~~~~~~~~~~~~~~~--~~~~~~~~ 110 (679)
T 2sli_A 37 GTIILSYKSTSENGIQSLFSVGNSTAGNQDRHFHIYIT----NSGGIGIELRNTDGVFNYTLDRPASVRA--LYKGERVF 110 (679)
T ss_dssp EEEEEEEEECCCCSEEEEEEEECCSTTCTTEEEEEEEE----TTSCEEEEEEECTTTCEEEEEESSCCCS--EETTEECC
T ss_pred eEEEEEEEcCCCCCceEEEEeecCCccccCcceEEEEc----CCCeEEEEEecCCCCeeeeccccccccc--ccCCCcee
Confidence 66666666654 5567888777775 4532221100 13556654332 2322222211111111 1124 59
Q ss_pred EEEEEEEeccccceeeeecccccccccccccccccccccCCceEEeecCCCCccccccCCCcccccc---chhhheehhh
Q 000135 1508 HIVTMTIDADIGEATCYLDGGFDGYQTGLALSAGNSIWEEGAEVWVGVRPPTDMDVFGRSDSEGAES---KMHIMDVFLW 1584 (2087)
Q Consensus 1508 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~ 1584 (2087)
|+|++++|+..|..+-|+||-.-..+.+-..-.-..+ |..+-=.+|+.+.+|+.. +=+|=++-++
T Consensus 111 ~~va~~~~~~~~~~~lyvnG~~v~~~~~~~~~f~~~~------------~~~~~~~iG~~~~~g~~~~~f~G~i~~~~iy 178 (679)
T 2sli_A 111 NTVALKADAANKQCRLFANGELLATLDKDAFKFISDI------------TGVDNVTLGGTKRQGKIAYPFGGTIGDIKVY 178 (679)
T ss_dssp EEEEEEEETTTTEEEEEETTEEEEEEECSSCCCGGGS------------TTCCEEEESSEEETTEEESCCCEEEEEEEEE
T ss_pred EEEEEEEECCCCeEEEEECCEEeEeeccccccccccc------------CCCceEEEeeeecCCceeccccceEeEEEEe
Confidence 9999999999999999999966554433110000001 112222356666666644 5667778899
Q ss_pred cccCChHHHHHHhhcc
Q 000135 1585 GRCLTEDEIASLYSAI 1600 (2087)
Q Consensus 1585 ~~cLtedEi~~~~~~~ 1600 (2087)
-+.||++||..+|++.
T Consensus 179 ~~~Ls~~ev~~~~~~~ 194 (679)
T 2sli_A 179 SNALSDEELIQATGVT 194 (679)
T ss_dssp SSCCCHHHHHHHHTTC
T ss_pred CCCCCHHHHhhhhccC
Confidence 9999999999999843
No 23
>2r16_A Neurexin-1-alpha; beta-sandwich, cell adhesion, splicing; 1.04A {Bos taurus}
Probab=79.33 E-value=2.3 Score=44.43 Aligned_cols=50 Identities=22% Similarity=0.369 Sum_probs=36.8
Q ss_pred ccccceeEEEEEecCCceeeeeeeccccceecCCceEEEEEEEeccccceeeeecccc
Q 000135 1472 IEAGQVGLRLITKGDRQTTVAKDWSISATSIADGRWHIVTMTIDADIGEATCYLDGGF 1529 (2087)
Q Consensus 1472 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1529 (2087)
|+.|++-+++- -|.+.+++. ....+.||+||.|+++.+. .+++-.+||..
T Consensus 60 L~~G~l~~~~~-~G~~~~~~~-----~~~~lnDg~WH~V~v~r~~--~~~~L~VD~~~ 109 (182)
T 2r16_A 60 LDAGRVKLTVN-LGKGPETLF-----AGYNLNDNEWHTVRVVRRG--KSLKLTVDDQQ 109 (182)
T ss_dssp EETTEEEEEEE-SSSCCEEEE-----ECSSCCSSSCEEEEEEEET--TEEEEEETTCC
T ss_pred EECCEEEEEEE-CCCCceEEE-----cCcccCCCCeEEEEEEEEC--CEEEEEECCce
Confidence 56788877763 355555542 4668999999999998885 46888899864
No 24
>3asi_A Neurexin-1-alpha; beta-sandwich, cell adhesion, synapse maturation, neuroligin glycosylation, membrane; HET: NAG; 2.30A {Bos taurus}
Probab=78.63 E-value=12 Score=43.50 Aligned_cols=96 Identities=19% Similarity=0.287 Sum_probs=54.5
Q ss_pred ccccceeEEEEEecCCceeeeeeeccccceecCCceEEEEEEEeccccceeeeecccccccccccccccccccccCCceE
Q 000135 1472 IEAGQVGLRLITKGDRQTTVAKDWSISATSIADGRWHIVTMTIDADIGEATCYLDGGFDGYQTGLALSAGNSIWEEGAEV 1551 (2087)
Q Consensus 1472 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1551 (2087)
|+.|++-++.- .|.+..++ + .....+.||+||.|+++.... +++-++||.--. .+.+-.....+-+....+
T Consensus 283 L~~G~l~~~~~-~g~~~~~~-~---~~~~~l~DG~wH~V~v~r~~~--~~~L~VD~~~~~--~~~~~g~~~~~~~~~~~l 353 (410)
T 3asi_A 283 IHQGKIGVKFN-VGTDDIAI-E---ESNAIINDGKYHVVRFTRSGG--NATLQVDSWPVI--ERYPAGRQLTIFNSQATI 353 (410)
T ss_dssp EETTEEEEEEE-SSSSCEEE-E---CCSCCCCSSSCEEEEEEEETT--EEEEEETTSCCE--EECCSSCCCCCBCCEEEE
T ss_pred EeCCEEEEEEE-CCCCceEE-e---cCccCcCCCCeEEEEEEEECC--EEEEEECCccee--cccCCCccceeeeccceE
Confidence 55677655543 24433322 1 134679999999999998864 678899986432 121110011122445679
Q ss_pred EeecCCCCccccccCCCccccccchhhheehhhcccC
Q 000135 1552 WVGVRPPTDMDVFGRSDSEGAESKMHIMDVFLWGRCL 1588 (2087)
Q Consensus 1552 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~cL 1588 (2087)
++|=.|+. .. -+=.|-++.++|+-+
T Consensus 354 ylGG~p~~--~~----------F~GCi~~v~ing~~~ 378 (410)
T 3asi_A 354 IIGGKEQG--QP----------FQGQLSGLYYNGLKV 378 (410)
T ss_dssp EESSTTTT--CC----------CCEEEEEEEETTBCH
T ss_pred EECCcccC--CC----------CEEEEEEEEECCHHH
Confidence 99977752 11 123455677777543
No 25
>1dyk_A Laminin alpha 2 chain; metal binding protein; 2.0A {Mus musculus} SCOP: b.29.1.4 b.29.1.4 PDB: 1okq_A 1qu0_A
Probab=77.11 E-value=4 Score=47.06 Aligned_cols=75 Identities=21% Similarity=0.305 Sum_probs=49.2
Q ss_pred ccccceeEEEEEecCCceeeeeeeccccceecCCceEEEEEEEeccccceeeeecccccccccccccccccccccCCceE
Q 000135 1472 IEAGQVGLRLITKGDRQTTVAKDWSISATSIADGRWHIVTMTIDADIGEATCYLDGGFDGYQTGLALSAGNSIWEEGAEV 1551 (2087)
Q Consensus 1472 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1551 (2087)
|+.|++-++.- -|.+.+++. +...+.||+||.|+++.+.. +++-++||.-..... +......+-...+
T Consensus 90 L~~G~l~~~~~-~g~g~~~~~-----~~~~~~Dg~WH~V~v~r~~~--~~~L~VD~~~~~~~~----~g~~~~l~~~~~l 157 (394)
T 1dyk_A 90 LRNGFPYFSYD-LGSGDTSTM-----IPTKINDGQWHKIKIVRVKQ--EGILYVDDASSQTIS----PKKADILDVVGIL 157 (394)
T ss_dssp EETTEEEEEEE-SSSCEEEEE-----CCSCCCSSSCEEEEEEEETT--EEEEEETTEEEEEEC----STTCCCCCCCSEE
T ss_pred EECCEEEEEEE-CCCCceEEE-----cccccCCCCEEEEEEEEeCC--EEEEEEcCcccceec----CCCCceecCCCCE
Confidence 56788766653 366655542 34689999999999999864 567788875433221 2333445555678
Q ss_pred EeecCCC
Q 000135 1552 WVGVRPP 1558 (2087)
Q Consensus 1552 ~~~~~~~ 1558 (2087)
.+|=-|+
T Consensus 158 ~vGG~p~ 164 (394)
T 1dyk_A 158 YVGGLPI 164 (394)
T ss_dssp EESSCCT
T ss_pred EEcccCC
Confidence 8887664
No 26
>2uur_A Collagen alpha-1(IX) chain; glycoprotein, hydroxylation, structural protein, NC4, collagen IX, polymorphism, extracellular matrix; 1.8A {Homo sapiens}
Probab=76.56 E-value=1.9 Score=48.19 Aligned_cols=50 Identities=20% Similarity=0.355 Sum_probs=34.4
Q ss_pred eecCCceEEEEEEEeccccceeeeecccccccccccccccccccccCCceEEeecC
Q 000135 1501 SIADGRWHIVTMTIDADIGEATCYLDGGFDGYQTGLALSAGNSIWEEGAEVWVGVR 1556 (2087)
Q Consensus 1501 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1556 (2087)
.++||+||.+++.|.. ..++-|+|=.--. -.++.....| ..+...|+|-|
T Consensus 151 ~L~Dg~WHklalsV~~--~~VtLyvDC~~~~---~~~l~~~~~i-~~~G~~~lG~~ 200 (245)
T 2uur_A 151 SLFDSQWHKIMIGVER--SSATLFVDCNRIE---SLPIKPRGPI-DIDGFAVLGKL 200 (245)
T ss_dssp GGCSSSCEEEEEEEET--TEEEEEETTEEEE---EEECCCBCCC-CCSSEEEEEEE
T ss_pred cccCCCEEEEEEEEEC--CEEEEEEecCccc---ccccCCCCcc-ccCCEEEEEEe
Confidence 5899999999999988 4699999977543 2333322333 34446677765
No 27
>3bod_A Neurexin-1-alpha; neurexin1D, LNS6, alternative splicing, calcium, cell adhesion, EGF-like domain, glycoprotein, membrane, metal- binding; 1.70A {Mus musculus} PDB: 2vh8_C 2xb6_C* 2wqz_C* 1c4r_A 3bop_A 3mw4_A*
Probab=76.13 E-value=5 Score=41.81 Aligned_cols=78 Identities=22% Similarity=0.344 Sum_probs=48.0
Q ss_pred ccccceeEEEEEecCCceeeeeeeccccceecCCceEEEEEEEeccccceeeeecccccccccccccccccccccCCceE
Q 000135 1472 IEAGQVGLRLITKGDRQTTVAKDWSISATSIADGRWHIVTMTIDADIGEATCYLDGGFDGYQTGLALSAGNSIWEEGAEV 1551 (2087)
Q Consensus 1472 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1551 (2087)
|..|++-+++-. |.+..++. .+...+.||+||.|+++.+.. +++-.+||.-.- ...+.......-+-...+
T Consensus 63 L~~G~l~~~~~~-G~~~~~~~----~~~~~vnDg~WH~V~v~r~~~--~~~L~VD~~~~~--~~~~~~~~~~~l~~~~~l 133 (178)
T 3bod_A 63 IHQGKIGVKFNV-GTDDIAIE----ESNAIINDGKYHVVRFTRSGG--NATLQVDSWPVI--ERYPAGRQLTIFNSQATI 133 (178)
T ss_dssp EETTEEEEEEES-SSCCEEEE----CCSSCCCSSSCEEEEEEEETT--EEEEEETTSCCE--EECCCSCCCCCBCCEEEE
T ss_pred EECCEEEEEEEC-CCCceEEe----cCCcCccCCCeEEEEEEEeCC--EEEEEEeCCcee--eeecCCCcceEEeCCCcE
Confidence 577888777543 44444432 345679999999999988754 567889986422 111111111223344578
Q ss_pred EeecCCC
Q 000135 1552 WVGVRPP 1558 (2087)
Q Consensus 1552 ~~~~~~~ 1558 (2087)
++|=-|+
T Consensus 134 ylGG~p~ 140 (178)
T 3bod_A 134 IIGGKEQ 140 (178)
T ss_dssp EESCCTT
T ss_pred EEecccC
Confidence 8887775
No 28
>2h0b_A Neurexin-1-alpha; B-sandwich, cell adhesion; 2.10A {Bos taurus}
Probab=75.45 E-value=4.7 Score=41.73 Aligned_cols=80 Identities=21% Similarity=0.288 Sum_probs=46.2
Q ss_pred ccccceeEEEEEecCCceeeeeeeccccceecCCceEEEEEEEeccccceeeeecccccccccccccccccccccCCceE
Q 000135 1472 IEAGQVGLRLITKGDRQTTVAKDWSISATSIADGRWHIVTMTIDADIGEATCYLDGGFDGYQTGLALSAGNSIWEEGAEV 1551 (2087)
Q Consensus 1472 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1551 (2087)
|..|++=+++- .|.+..... ...+...+.||+||.|+++.+. .+++-.+||..... +. .+.....-.....+
T Consensus 59 L~~G~l~~~~~-~G~g~~~~~--~~~~~~~l~Dg~WH~V~v~r~~--~~~~L~VD~~~~~~--~~-~~~~~~~l~~~~~l 130 (184)
T 2h0b_A 59 LKNGAVSLVIN-LGSGAFEAL--VEPVNGKFNDNAWHDVKVTRNL--RQVTISVDGILTTT--GY-TQEDYTMLGSDDFF 130 (184)
T ss_dssp EETTEEEEEEE-ESSCEEEEE--ECCSSSCSSSSSCEEEEEEEET--TEEEEEETTTEEEE--EE-CSTTCCCEEECSEE
T ss_pred EECCEEEEEEE-CCCCeEEEE--EecCCcccCCCCeEEEEEEEeC--CEEEEEEcCceeee--eE-CCCCceeccCCCCE
Confidence 56777766653 355432210 1125668999999999999765 45788899764321 11 11111122334568
Q ss_pred EeecCCCC
Q 000135 1552 WVGVRPPT 1559 (2087)
Q Consensus 1552 ~~~~~~~~ 1559 (2087)
++|=-|+.
T Consensus 131 ~lGG~p~~ 138 (184)
T 2h0b_A 131 YVGGSPST 138 (184)
T ss_dssp EESCCTTG
T ss_pred EECCCCcc
Confidence 88877653
No 29
>2jd4_A Laminin subunit alpha-1; basement membrane protein, metal binding protein; 1.9A {Mus musculus}
Probab=73.90 E-value=6.1 Score=45.17 Aligned_cols=77 Identities=19% Similarity=0.344 Sum_probs=50.9
Q ss_pred cccccceeEEEEEecCCceeeeeeeccccceecCCceEEEEEEEeccccceeeeecccccccccccccccccccccCCce
Q 000135 1471 GIEAGQVGLRLITKGDRQTTVAKDWSISATSIADGRWHIVTMTIDADIGEATCYLDGGFDGYQTGLALSAGNSIWEEGAE 1550 (2087)
Q Consensus 1471 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1550 (2087)
.|+.|++-++.- -|.+.+++. +...+.||+||.|+++.+.. +++-++||.-..... .+......+....
T Consensus 75 ~L~~G~l~~~~~-~g~~~~~~~-----~~~~~~Dg~WH~V~v~r~~~--~~~L~VD~~~~~~~~---~~g~~~~l~~~~~ 143 (383)
T 2jd4_A 75 QLQEGRLHFMFD-LGKGRTKVS-----HPALLSDGKWHTVKTEYIKR--KAFMTVDGQESPSVT---VVGKATTLDVERK 143 (383)
T ss_dssp EEETTEEEEEEE-CSSCEEEEE-----CCCCCTTSSCEEEEEEEETT--EEEEEETTEECCCEE---CCSSCCCCCCCSE
T ss_pred EEECCEEEEEEE-CCCCeEEEe-----CcceecCCCcEEEEEEEeCC--EEEEEEcCcccccee---cCCCcceecCCCC
Confidence 356788777753 466655542 34679999999999998764 577889986443211 1223344555678
Q ss_pred EEeecCCC
Q 000135 1551 VWVGVRPP 1558 (2087)
Q Consensus 1551 ~~~~~~~~ 1558 (2087)
+++|=-|+
T Consensus 144 l~vGG~p~ 151 (383)
T 2jd4_A 144 LYLGGLPS 151 (383)
T ss_dssp EEESSCCT
T ss_pred eEEeccCc
Confidence 89988774
No 30
>3rsj_A BONT/F; clostridium botulinum type F, ganglioside binding site, GD1A; HET: NGA GAL SIA; 2.00A {Clostridium botulinum} PDB: 3fuq_A
Probab=68.67 E-value=4 Score=48.99 Aligned_cols=82 Identities=21% Similarity=0.316 Sum_probs=52.2
Q ss_pred ccceecCCceEEEEEEEeccccceeeeecccccccccccccccccccccCCceEEeecCCCC--ccccccCCCccccccc
Q 000135 1498 SATSIADGRWHIVTMTIDADIGEATCYLDGGFDGYQTGLALSAGNSIWEEGAEVWVGVRPPT--DMDVFGRSDSEGAESK 1575 (2087)
Q Consensus 1498 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~ 1575 (2087)
|++... |+||-||||.| -+|++.-||+|-.-.-+ -|+ |+.|=. +-.-|||----.. --
T Consensus 135 ~~~dyi-n~W~hVTIT~d-rlg~~~IYINGklv~~~----------~i~-------~L~~I~~sn~I~fg~~~~~~~-~n 194 (413)
T 3rsj_A 135 SISDYI-NKWIFVTITNN-RLGNSRIYINGNLIDEK----------SIS-------NLGDIHVSDNILFKIVGCNDT-RY 194 (413)
T ss_dssp SSCSST-TSEEEEEEEEC-TTSEEEEEETTEEEEEE----------ECT-------TCCCCCCCSEEEEEEESCCSS-CE
T ss_pred Cccccc-cceEEEEEEec-CCCCeeEEECCEEecce----------ehh-------hccccccccceEEeeecccCc-ce
Confidence 333445 99999999999 88999999999754422 222 111100 2333432111101 22
Q ss_pred hhhheehhhcccCChHHHHHHhhc
Q 000135 1576 MHIMDVFLWGRCLTEDEIASLYSA 1599 (2087)
Q Consensus 1576 ~~~~~~~~~~~cLtedEi~~~~~~ 1599 (2087)
+-|=||=+|.+-||++||+.+|..
T Consensus 195 ~~Idd~~IfdKeLt~~EV~~mY~~ 218 (413)
T 3rsj_A 195 VGIRYFKVFDTELGKTEIETLYSD 218 (413)
T ss_dssp EEEEEEEEESSCCCHHHHHHHHHH
T ss_pred EEEEEEEEEcccCCHHHHHHHHhc
Confidence 456688899999999999998873
No 31
>2r1d_A Neurexin-1-beta, neurexin I-beta; beta-sandwich, cell adhesion, splicing; 2.60A {Rattus norvegicus} SCOP: b.29.1.4 PDB: 3biw_E*
Probab=66.19 E-value=9.3 Score=41.82 Aligned_cols=78 Identities=22% Similarity=0.365 Sum_probs=48.0
Q ss_pred ccccceeEEEEEecCCceeeeeeeccccceecCCceEEEEEEEeccccceeeeecccccccccccccccccccccCCceE
Q 000135 1472 IEAGQVGLRLITKGDRQTTVAKDWSISATSIADGRWHIVTMTIDADIGEATCYLDGGFDGYQTGLALSAGNSIWEEGAEV 1551 (2087)
Q Consensus 1472 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1551 (2087)
|+.|++-+++- -|.+..++ +. ....+.||+||.|+++-+.. +++-.+||.-.- ...+.+.....-+....+
T Consensus 97 L~~G~l~~~~~-~G~~~~~~-~~---~~~~vnDG~WH~V~v~r~~~--~~~L~VD~~~~~--~~~~~~~~~~~l~~~~~l 167 (226)
T 2r1d_A 97 IHQGKIGVKFN-VGTDDIAI-EE---SNAIINDGKYHVVRFTRSGG--NATLQVDSWPVI--ERYPAGRQLTIFNSQATI 167 (226)
T ss_dssp EETTEEEEEEE-SSSCEEEE-EC---CSSCCCSSSCEEEEEEEETT--EEEEEETTSCCE--EECCSSCCCCCBCSEEEE
T ss_pred EECCEEEEEEE-CCCCcEEE-Ee---CCeEecCCCCEEEEEEEeCC--EEEEEEcCccce--EEecCCCcceeccCCCeE
Confidence 67788877764 34444433 21 24579999999999988754 567888986321 112233333334445678
Q ss_pred EeecCCC
Q 000135 1552 WVGVRPP 1558 (2087)
Q Consensus 1552 ~~~~~~~ 1558 (2087)
++|=-|.
T Consensus 168 ylGG~p~ 174 (226)
T 2r1d_A 168 IIGGKEQ 174 (226)
T ss_dssp EESSTTT
T ss_pred EEccccC
Confidence 8887774
No 32
>2r1b_A Neurexin-1-beta, neurexin I-beta; beta-sandwich, cell adhesion, splicing; 1.72A {Rattus norvegicus} PDB: 3mw2_A* 3b3q_E* 3mw3_A*
Probab=65.43 E-value=6 Score=42.95 Aligned_cols=50 Identities=28% Similarity=0.510 Sum_probs=34.8
Q ss_pred ccccceeEEEEEecCCceeeeeeeccccceecCCceEEEEEEEeccccceeeeeccc
Q 000135 1472 IEAGQVGLRLITKGDRQTTVAKDWSISATSIADGRWHIVTMTIDADIGEATCYLDGG 1528 (2087)
Q Consensus 1472 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1528 (2087)
|+.|++-+++=. |.+.+++. .....+.||+||.|+++-+.. +++-.+|+.
T Consensus 69 L~~G~l~~~~~~-G~~~~~~~----~~~~~vnDG~WH~V~v~r~~~--~~~L~VD~~ 118 (220)
T 2r1b_A 69 IHQGKIGVKFNV-GTDDIAIE----ESNAIINDGKYHVVRFTRSGG--NATLQVDSW 118 (220)
T ss_dssp EETTEEEEEEES-SSSCEEEE----CTTCCCCSSSCEEEEEEEETT--EEEEEETTS
T ss_pred EECCEEEEEEEC-CCCceEEE----eCceEecCCceEEEEEEEeCC--EEEEEECCc
Confidence 578888887644 55544442 123569999999999988754 567778876
No 33
>2jd4_A Laminin subunit alpha-1; basement membrane protein, metal binding protein; 1.9A {Mus musculus}
Probab=64.82 E-value=20 Score=41.01 Aligned_cols=80 Identities=19% Similarity=0.295 Sum_probs=46.4
Q ss_pred ccccceeEEEEEecCCceeeeeeeccccceecCCceEEEEEEEeccccceeeeecccccccccccccccccccccCCceE
Q 000135 1472 IEAGQVGLRLITKGDRQTTVAKDWSISATSIADGRWHIVTMTIDADIGEATCYLDGGFDGYQTGLALSAGNSIWEEGAEV 1551 (2087)
Q Consensus 1472 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1551 (2087)
|+.|++=+++- .|.+..++ +--.-....+.||+||.|+++.+.. +++-.+||.-.... .+. ......+....+
T Consensus 252 L~~G~l~~~~~-~g~g~~~~-~~~~~~~~~l~DG~WH~V~l~~~~~--~~~L~VD~~~~~~~--~~~-~~~~~l~~~~~l 324 (383)
T 2jd4_A 252 IVDGKVLFHVN-NGAGRITA-TYQPRAARALCDGKWHTLQAHKSKH--RIVLTVDGNSVRAE--SPH-THSTSADTNDPI 324 (383)
T ss_dssp EETTEEEEEEE-SSSCEEEE-EECCSSTTGGGSSSCEEEEEEEETT--EEEEEETTEEEEEC-------CCCCBCCCEEE
T ss_pred EECCEEEEEEE-CCCCcEEE-EEecCCCccccCCCcEEEEEEEcCC--EEEEEECCeecccc--cCC-CCcccccCCCCE
Confidence 56778777654 35443332 1111123569999999999988754 67788998643221 111 111234556678
Q ss_pred EeecCCC
Q 000135 1552 WVGVRPP 1558 (2087)
Q Consensus 1552 ~~~~~~~ 1558 (2087)
++|=-|.
T Consensus 325 ylGG~p~ 331 (383)
T 2jd4_A 325 YVGGYPA 331 (383)
T ss_dssp EESCCCT
T ss_pred EEecccc
Confidence 8887764
No 34
>1epw_A Bontoxilysin B, botulinum neurotoxin type B; zinc, metalloprotease, transmembrane, hydrolase; 1.90A {Clostridium botulinum} SCOP: b.29.1.6 b.42.4.2 d.92.1.7 h.4.2.1 PDB: 1f31_A* 1g9a_A* 1g9b_A* 1g9c_A* 1g9d_A* 1i1e_A* 1s0b_A 1s0c_A 1s0d_A 1s0e_A 1s0f_A 1s0g_A 2np0_A 3zuq_A 2etf_A 2xhl_A 1z0h_A 2nm1_A 3g94_A 1f82_A ...
Probab=62.80 E-value=6.6 Score=52.01 Aligned_cols=77 Identities=18% Similarity=0.377 Sum_probs=48.7
Q ss_pred CceEEEEEEEeccccceeeeecccccccccccccccccccccCCceEEeecCCCCccccccCCCccccccchhhheehhh
Q 000135 1505 GRWHIVTMTIDADIGEATCYLDGGFDGYQTGLALSAGNSIWEEGAEVWVGVRPPTDMDVFGRSDSEGAESKMHIMDVFLW 1584 (2087)
Q Consensus 1505 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1584 (2087)
||||-||||+| .|.+--||||..-.-. ++..-+.|-..++ .=+|+ |. --| ---++-|=|.-+.
T Consensus 999 NkW~fVTItnd--lg~~~IYING~Li~~~---~I~~L~dI~ss~~-I~fgl------vn--~~D---~~~~i~Id~f~If 1061 (1290)
T 1epw_A 999 NRWFFVTITNN--LNNAKIYINGKLESNT---DIKDIREVIANGE-IIFKL------DG--DID---RTQFIWMKYFSIF 1061 (1290)
T ss_dssp TSCEEEEEEEC--SSEEEEEETTEEEEEE---ECSSCCCCCCCSE-EEEEE------EE--SCC---TTCCEEEEEEEEE
T ss_pred CceEEEEEEec--CCceEEEECCEEeech---hhhhhhceeecce-EEEEe------cc--CCC---CCceeeEeeEEEe
Confidence 99999999999 9999999999765433 2221123333221 11220 00 000 1123445567788
Q ss_pred cccCChHHHHHHhh
Q 000135 1585 GRCLTEDEIASLYS 1598 (2087)
Q Consensus 1585 ~~cLtedEi~~~~~ 1598 (2087)
.|-||++||..+|.
T Consensus 1062 nkeLt~~EI~~LY~ 1075 (1290)
T 1epw_A 1062 NTELSQSNIEERYK 1075 (1290)
T ss_dssp SSCCCHHHHHHHHH
T ss_pred cCcCCHHHHHHHHh
Confidence 99999999999998
No 35
>1dyk_A Laminin alpha 2 chain; metal binding protein; 2.0A {Mus musculus} SCOP: b.29.1.4 b.29.1.4 PDB: 1okq_A 1qu0_A
Probab=62.28 E-value=23 Score=40.92 Aligned_cols=80 Identities=19% Similarity=0.236 Sum_probs=45.2
Q ss_pred ccccceeEEEEEecCCceeeeeeeccccceecCCceEEEEEEEeccccceeeeecccccccccccccccccccccCCceE
Q 000135 1472 IEAGQVGLRLITKGDRQTTVAKDWSISATSIADGRWHIVTMTIDADIGEATCYLDGGFDGYQTGLALSAGNSIWEEGAEV 1551 (2087)
Q Consensus 1472 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1551 (2087)
|+.|++=+++-. |.+..++.-+ .-....+.||+||.|+++.+.. +++-++||.-...+.. . .....=+.+..+
T Consensus 264 L~~G~l~~~~~~-g~~~~~~~~~-~~~~~~l~DG~WH~V~v~~~~~--~~~L~VD~~~~~~~~~--~-~~~~~l~~~~~l 336 (394)
T 1dyk_A 264 MIDEKLMFHVDN-GAGRFTAIYD-AEIPGHMCNGQWHKVTAKKIKN--RLELVVDGNQVDAQSP--N-SASTSADTNDPV 336 (394)
T ss_dssp EETTEEEEEEES-SSCCEEEEEC-CCSTTSTTSSSCEEEEEEEETT--EEEEEETTEEEEEECC--C-TTCCCBCCCBCC
T ss_pred EECCEEEEEEEC-CCCcEEEEEe-cCCCccccCCceEEEEEEEeCC--EEEEEECCcccccccC--C-CcceecccCCCE
Confidence 567777766543 4443332111 0124579999999999988754 5788899864332211 0 011112334567
Q ss_pred EeecCCC
Q 000135 1552 WVGVRPP 1558 (2087)
Q Consensus 1552 ~~~~~~~ 1558 (2087)
++|=.|.
T Consensus 337 ylGG~p~ 343 (394)
T 1dyk_A 337 FVGGFPG 343 (394)
T ss_dssp EESCCCT
T ss_pred EEcCCCc
Confidence 8886664
No 36
>3v0a_B NTNH; botulinum neurotoxin, toxin, neurotoxin associated protein, progenitor toxin complex, VHH bound interlocked complex; HET: MES; 2.70A {Clostridium botulinum} PDB: 3v0b_B
Probab=59.74 E-value=8.6 Score=49.97 Aligned_cols=78 Identities=15% Similarity=0.316 Sum_probs=53.1
Q ss_pred eecCCceEEEEEEEeccccce-eeeecccccccccccccccccccccCCceEEeecCCCCccccccCCCccccccchhhh
Q 000135 1501 SIADGRWHIVTMTIDADIGEA-TCYLDGGFDGYQTGLALSAGNSIWEEGAEVWVGVRPPTDMDVFGRSDSEGAESKMHIM 1579 (2087)
Q Consensus 1501 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1579 (2087)
.+++|+||-||||+|- .|++ .-||||..-.... +..-+.|-..++=..+|-. --+.|=
T Consensus 959 dy~~NkWyfITISvDR-LGnalkIYINGkLv~~~s---I~~l~nI~sSn~Isfvg~n-----------------~~i~Ie 1017 (1196)
T 3v0a_B 959 DVSNNSWHYITISVDR-LKEQLLIFIDDNLVANES---IKEILNIYSSNIISLLSEN-----------------NPSYIE 1017 (1196)
T ss_dssp SCCSSSCEEEEEEEET-TTTEEEEEETTEEEEEEE---CTTCCCCCCCSEEEECCTT-----------------CCEEEE
T ss_pred cccCCcEEEEEEEEcC-CCceeEEEECCEEeechh---hhhhcCeeecceEEEecCC-----------------Ceeeee
Confidence 8899999999999985 6899 9999997654332 2222234433333333333 223344
Q ss_pred eehhhcccCChHHHHHHhhc
Q 000135 1580 DVFLWGRCLTEDEIASLYSA 1599 (2087)
Q Consensus 1580 ~~~~~~~cLtedEi~~~~~~ 1599 (2087)
+.=+..|-||++||..+|..
T Consensus 1018 ~f~IfnKeLt~eEI~~lY~s 1037 (1196)
T 3v0a_B 1018 GLTILNKPTTSQEVLSNYFE 1037 (1196)
T ss_dssp EEEEESSCCCHHHHHHHHHH
T ss_pred eeehhcccCCHHHHHHHHHh
Confidence 55577899999999999983
No 37
>1yal_A Chymopapain; hydrolase, thiol protease; 1.70A {Carica papaya} SCOP: d.3.1.1 PDB: 1gec_E*
Probab=57.71 E-value=22 Score=38.54 Aligned_cols=41 Identities=24% Similarity=0.572 Sum_probs=34.1
Q ss_pred cCceeEEEEEEEECCEEEEEEecCCCCCccccCCCCCCCcccchHHhhhhcCCCCCCCCeEEEehhh
Q 000135 1927 QGHAYSILQVREVDGHKLVQIRNPWANEVEWNGPWSDSSPEWTDRMKHKLKHVPQSKDGIFWMSWQD 1993 (2087)
Q Consensus 1927 sGHAYSVLDVrEVdG~RLVRLRNPWG~~~EWKGdWSD~S~eWTeeLKkkL~~~~~sDDGeFWMSfED 1993 (2087)
.+|+-.|++..+-+|.+.-.+||-||. .| .++|-|||+.+.
T Consensus 157 ~~HaV~iVGyg~~~g~~yWivkNSWG~--~W------------------------Ge~Gy~~i~~~~ 197 (218)
T 1yal_A 157 LDHAVTAVGYGTSDGKNYIIIKNSWGP--NW------------------------GEKGYMRLKRQS 197 (218)
T ss_dssp CCEEEEEEEEEEETTEEEEEEECSBCT--TS------------------------TBTTEEEEECCC
T ss_pred CCEEEEEEEeeccCCccEEEEEeCCCC--Cc------------------------ccCcEEEEECCC
Confidence 489999999988788899999999994 44 357999998763
No 38
>2nyy_A Botulinum neurotoxin type A; neurotoxin, FAB, protein antibody complex, toxin- system complex; 2.61A {Clostridium botulinum} PDB: 2nz9_A 3bta_A 3v0a_A* 3v0b_A 3v0c_A 3zus_A 3zur_A
Probab=57.70 E-value=11 Score=50.05 Aligned_cols=77 Identities=26% Similarity=0.448 Sum_probs=52.3
Q ss_pred CceEEEEEEEeccccceeeeecccccccccccccccccccccCCceEE--eecCCCCccccccCCCccccccchhhheeh
Q 000135 1505 GRWHIVTMTIDADIGEATCYLDGGFDGYQTGLALSAGNSIWEEGAEVW--VGVRPPTDMDVFGRSDSEGAESKMHIMDVF 1582 (2087)
Q Consensus 1505 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1582 (2087)
++||-||||+|- .|++.-||||..-... ++..-+.|-...+=.- +|.. |. --++.|=|.-
T Consensus 1011 NkW~fVTITndR-lgna~IYINGkLi~~~---~I~~l~nI~~sd~Isfk~~g~n-----------D~---~~~i~Id~l~ 1072 (1295)
T 2nyy_A 1011 NRWIFVTITNNR-LNNSKIYINGRLIDQK---PISNLGNIHASNNIMFKLDGCR-----------DT---HRYIWIKYFN 1072 (1295)
T ss_dssp TSCEEEEEEEET-TSEEEEEETTEEEEEE---ECTTCCCCCCCSEEEEEEESCC-----------CT---TCEEEEEEEE
T ss_pred CceEEEEEEEcC-CCceeEEECCEEeecc---eecccCCcccCceEEEEeccCC-----------CC---ccceeEeeEE
Confidence 999999999985 6899999999776543 2333333332222222 2322 10 1355666778
Q ss_pred hhcccCChHHHHHHhhc
Q 000135 1583 LWGRCLTEDEIASLYSA 1599 (2087)
Q Consensus 1583 ~~~~cLtedEi~~~~~~ 1599 (2087)
+..|-||++||..+|..
T Consensus 1073 IfnkeLt~~EI~~LY~~ 1089 (1295)
T 2nyy_A 1073 LFDKELNEKEIKDLYDN 1089 (1295)
T ss_dssp EESSCCCHHHHHHHHHH
T ss_pred EecCcCCHHHHHHHHhc
Confidence 99999999999999983
No 39
>2wjs_A Laminin subunit alpha-2; integrin, secreted, coiled coil, glycoprotein, laminin EGF-like domain, extracellular matrix, laminin G-like domain; HET: NAG; 2.80A {Mus musculus}
Probab=56.83 E-value=18 Score=44.18 Aligned_cols=79 Identities=24% Similarity=0.290 Sum_probs=43.7
Q ss_pred cccccceeEEEEEecCCceeeeeeeccccceecCCceEEEEEEEeccccceeeeecccccccccccccccccccccCCce
Q 000135 1471 GIEAGQVGLRLITKGDRQTTVAKDWSISATSIADGRWHIVTMTIDADIGEATCYLDGGFDGYQTGLALSAGNSIWEEGAE 1550 (2087)
Q Consensus 1471 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1550 (2087)
.|+.|++-+++-. |.+....+ +=..+...+.||+||.|+++.+. .+.+-++||.-.... ++. .....+ ...
T Consensus 438 ~L~~G~l~~~~~~-g~~~~~~~-~l~~~~~~l~DG~WH~V~v~~~~--~~~~L~VD~~~~~~~---~~~-~~~~l~-~~~ 508 (608)
T 2wjs_A 438 FLNKGRLEVHLSS-GTRTMRKI-VIKPEPNRFHDGREHSVHVERTR--GIFTVQIDEDRRHMQ---NLT-EEQPIE-VKK 508 (608)
T ss_dssp EEETTEEEEEEEC-----CEEE-EECCCSSCSSSSSCEEEEEEECS--SEEEEEESSSCCEEE---ECC-CCSCBC-CSC
T ss_pred EEECCEEEEEEEC-CCCceeEE-EEeCCCcccCCCCeEEEEEEEeC--CEEEEEECCcccccc---cCC-cccccc-cCc
Confidence 3567887666532 33321101 11113467999999999999876 468889998754221 111 111222 235
Q ss_pred EEeecCCC
Q 000135 1551 VWVGVRPP 1558 (2087)
Q Consensus 1551 ~~~~~~~~ 1558 (2087)
+++|--|.
T Consensus 509 lylGG~p~ 516 (608)
T 2wjs_A 509 LFVGGAPP 516 (608)
T ss_dssp EEESCCCC
T ss_pred eEEeCCCc
Confidence 78886664
No 40
>3p5u_A Actinidin; SAD, cysteine proteinases, hydrolase; 1.50A {Actinidia arguta} SCOP: d.3.1.1 PDB: 3p5v_A 3p5w_A 3p5x_A 1aec_A* 2act_A
Probab=56.67 E-value=24 Score=38.11 Aligned_cols=41 Identities=20% Similarity=0.465 Sum_probs=33.9
Q ss_pred cCceeEEEEEEEECCEEEEEEecCCCCCccccCCCCCCCcccchHHhhhhcCCCCCCCCeEEEehhh
Q 000135 1927 QGHAYSILQVREVDGHKLVQIRNPWANEVEWNGPWSDSSPEWTDRMKHKLKHVPQSKDGIFWMSWQD 1993 (2087)
Q Consensus 1927 sGHAYSVLDVrEVdG~RLVRLRNPWG~~~EWKGdWSD~S~eWTeeLKkkL~~~~~sDDGeFWMSfED 1993 (2087)
.+||=.|++..+-+|.+.-.+||-||. .| .++|-|||.-..
T Consensus 160 ~~HaV~iVGyg~~~g~~yWivkNSWG~--~W------------------------Ge~Gy~~i~r~~ 200 (220)
T 3p5u_A 160 VDHAVTIVGYGTEGGIDYWIVKNSWGT--TW------------------------GEEGYMRIQRNV 200 (220)
T ss_dssp CCEEEEEEEEEEETTEEEEEEECSBCT--TS------------------------TBTTEEEEECCC
T ss_pred cceEEEEEEEecCCCceEEEEECCCCC--Cc------------------------ccCCEEEEECCC
Confidence 489999999998788899999999994 44 357999998653
No 41
>1cqd_A Protein (protease II); cysteine protease, glycoprotein, proline specificity, carboh papain family, hydrolase; HET: NAG FUL FUC; 2.10A {Zingiber officinale} SCOP: d.3.1.1
Probab=56.58 E-value=23 Score=38.39 Aligned_cols=40 Identities=15% Similarity=0.479 Sum_probs=33.9
Q ss_pred cCceeEEEEEEEECCEEEEEEecCCCCCccccCCCCCCCcccchHHhhhhcCCCCCCCCeEEEehh
Q 000135 1927 QGHAYSILQVREVDGHKLVQIRNPWANEVEWNGPWSDSSPEWTDRMKHKLKHVPQSKDGIFWMSWQ 1992 (2087)
Q Consensus 1927 sGHAYSVLDVrEVdG~RLVRLRNPWG~~~EWKGdWSD~S~eWTeeLKkkL~~~~~sDDGeFWMSfE 1992 (2087)
.+||-.|++..+-+|.+.-.+||-||. .| .++|-|||+.+
T Consensus 159 ~~HaV~iVGyg~~~g~~yWivkNSWG~--~W------------------------Ge~Gy~~i~r~ 198 (221)
T 1cqd_A 159 ANHALTVVGYGTENDKDFWIVKNSWGK--NW------------------------GESGYIRAERN 198 (221)
T ss_dssp CCEEEEEEEEEEETTEEEEEEECSBCT--TS------------------------TBTTEEEEECS
T ss_pred CCeEEEEEEEcccCCCcEEEEEeCCCC--Cc------------------------ccCCEEEEEcC
Confidence 589999999988788899999999994 44 35799999875
No 42
>2jkb_A Sialidase B; intramolecular trans-sialidase, lyase, glycosidase, neuraminidase; HET: SKD; 1.54A {Streptococcus pneumoniae} PDB: 2vw2_A* 2vw1_A* 2vw0_A*
Probab=55.80 E-value=9.4 Score=48.26 Aligned_cols=141 Identities=16% Similarity=0.176 Sum_probs=75.6
Q ss_pred EEEEEEeecCCC--ceeeecccccchh-hhheeeccccccccccceeEEEEEe-cCCceeeeeeeccccceec---CC--
Q 000135 1435 FSIAVMIQPESG--PVCLLGTEFQKKV-CWEILVAGSEQGIEAGQVGLRLITK-GDRQTTVAKDWSISATSIA---DG-- 1505 (2087)
Q Consensus 1435 ~~~~~~~~~~~~--~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~---~~-- 1505 (2087)
+++++-+-|+.+ .--||+.--+++. =+|-+-.--+ ..|.+|+-+.-. |....++ .....|- .|
T Consensus 59 ~T~~~~~~~~~~~~~~~lfs~sn~~~~~~~~~~~~~i~---~~g~~~~~~r~~~~~~~~~~-----~~~~~~~~~~~~~~ 130 (686)
T 2jkb_A 59 QTVVMKFKADKPNSLQALFGLSNSKAGFKNNYFSIFMR---DSGEIGVEIRDAQKGINYLF-----SRPASLWGKHKGQA 130 (686)
T ss_dssp EEEEEEEECSSCCSEEEEEEEECCSTTCTTCEEEEEEE---TTSCEEEEEEETTTTEEEEE-----EESSCCCCEETTEE
T ss_pred eEEEEEEEccCCCCeeEEEEeecCcccccCcceEEEEc---CCCeEEEEEecCCCCeeeec-----cccccccccccCCc
Confidence 455555566543 3467766555431 2342221111 145666654322 2211122 1222333 45
Q ss_pred ceEEEEEEEeccccceeeeeccccccccccc---ccccccccccCCceEEeecCCCCccccccCCCccccc---cchhhh
Q 000135 1506 RWHIVTMTIDADIGEATCYLDGGFDGYQTGL---ALSAGNSIWEEGAEVWVGVRPPTDMDVFGRSDSEGAE---SKMHIM 1579 (2087)
Q Consensus 1506 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~ 1579 (2087)
.||+|++++|...|.++-|+||-.-..+.+- .+.. =|..+--..|+-+.+|+. .+=+|=
T Consensus 131 ~~~~va~~~d~~~~~~~lyvnG~~v~~~~~~~~~~~~~---------------~~~~~~~~iG~~~~~g~~~~~f~G~id 195 (686)
T 2jkb_A 131 VENTLVFVSDSKDKTYTMYVNGIEVFSETVDTFLPISN---------------INGIDKATLGAVNREGKEHYLAKGSID 195 (686)
T ss_dssp CCEEEEEEEETTTTEEEEEETTEEEEEEECSSCCCGGG---------------STTCCEEEESSEEETTEEESCCEEEEE
T ss_pred ceeEEEEEEECCCCeEEEEECCEEEEeecccccceecc---------------CCCcceeeecccccCCcccccccceEe
Confidence 7999999999999999999999554433211 0000 011111122332223332 445677
Q ss_pred eehhhcccCChHHHHHHhh
Q 000135 1580 DVFLWGRCLTEDEIASLYS 1598 (2087)
Q Consensus 1580 ~~~~~~~cLtedEi~~~~~ 1598 (2087)
++-++-+.||++||..+++
T Consensus 196 ~~~iy~~~Ls~~ei~~~~~ 214 (686)
T 2jkb_A 196 EISLFNKAISDQEVSTIPL 214 (686)
T ss_dssp EEEEESSCCCHHHHHTSCC
T ss_pred EEEEecCCCCHHHHHHHhc
Confidence 7888999999999999986
No 43
>3ois_A Cysteine protease; alpha and beta, hydrolase; HET: UDP; 1.65A {Xylella fastidiosa}
Probab=53.63 E-value=9 Score=43.29 Aligned_cols=42 Identities=33% Similarity=0.654 Sum_probs=34.2
Q ss_pred cCceeEEEEEEEECCEEEEEEecCCCCCccccCCCCCCCcccchHHhhhhcCCCCCCCCeEEEehhhhhh
Q 000135 1927 QGHAYSILQVREVDGHKLVQIRNPWANEVEWNGPWSDSSPEWTDRMKHKLKHVPQSKDGIFWMSWQDFQI 1996 (2087)
Q Consensus 1927 sGHAYSVLDVrEVdG~RLVRLRNPWG~~~EWKGdWSD~S~eWTeeLKkkL~~~~~sDDGeFWMSfEDFLk 1996 (2087)
.+||-.|++.. ++.+...+||-||. .| .++|-|||+.+.|.+
T Consensus 235 ~~Hav~iVGy~--~~~~ywivkNSWG~--~W------------------------G~~Gy~~i~~~~~~~ 276 (291)
T 3ois_A 235 GGHAVLCVGYD--DEIRHFRIRNSWGN--NV------------------------GEDGYFWMPYEYISN 276 (291)
T ss_dssp EEEEEEEEEEE--TTTTEEEEECSBCT--TS------------------------TBTTEEEEEHHHHTC
T ss_pred CCeEEEEEEEe--CCCCEEEEEeCCCC--CC------------------------CCCcEEEEEHHHhcC
Confidence 48999999985 56678999999994 44 357999999998874
No 44
>8pch_A Cathepsin H; hydrolase, protease, cysteine proteinase, aminopeptidase; HET: NAG BMA; 2.10A {Sus scrofa} SCOP: d.3.1.1 PDB: 1nb3_A* 1nb5_A*
Probab=53.28 E-value=18 Score=38.95 Aligned_cols=41 Identities=22% Similarity=0.462 Sum_probs=34.1
Q ss_pred ccCceeEEEEEEEECCEEEEEEecCCCCCccccCCCCCCCcccchHHhhhhcCCCCCCCCeEEEehh
Q 000135 1926 VQGHAYSILQVREVDGHKLVQIRNPWANEVEWNGPWSDSSPEWTDRMKHKLKHVPQSKDGIFWMSWQ 1992 (2087)
Q Consensus 1926 VsGHAYSVLDVrEVdG~RLVRLRNPWG~~~EWKGdWSD~S~eWTeeLKkkL~~~~~sDDGeFWMSfE 1992 (2087)
..+||-.|++..+-+|.+.-.+||-||. .| .++|-|||...
T Consensus 163 ~~~HaV~iVGyg~~~g~~yWivkNSWG~--~W------------------------Ge~Gy~~i~r~ 203 (220)
T 8pch_A 163 KVNHAVLAVGYGEENGIPYWIVKNSWGP--QW------------------------GMNGYFLIERG 203 (220)
T ss_dssp TCCEEEEEEEEEEETTEEEEEEECSBCT--TS------------------------TBTTEEEEECS
T ss_pred cCCcEEEEEEEEccCCeeEEEEECCCCc--Cc------------------------ccCCEEEEEcC
Confidence 3589999999998888899999999994 44 35799999875
No 45
>3qcw_A Neurexin-1-alpha; synaptic adhesion molecule, cell adhesion; HET: NAG; 2.65A {Bos taurus} PDB: 3r05_A* 3poy_A*
Probab=53.09 E-value=16 Score=48.56 Aligned_cols=76 Identities=18% Similarity=0.272 Sum_probs=48.3
Q ss_pred ccccceeEEEEEecCCceeeeeeeccccceecCCceEEEEEEEeccccceeeeecccccccccccccccccccccCCceE
Q 000135 1472 IEAGQVGLRLITKGDRQTTVAKDWSISATSIADGRWHIVTMTIDADIGEATCYLDGGFDGYQTGLALSAGNSIWEEGAEV 1551 (2087)
Q Consensus 1472 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1551 (2087)
|..|++=+++ ..|.+.+++. ++...+.||+||.|+++.+... ++-.+|+.-- ....+......+.+..+
T Consensus 487 L~~G~l~l~~-~~G~g~~~l~----~s~~~vnDG~WH~V~l~r~~~~--~~L~VD~~~~----~~~~~~~~~~l~~~~~l 555 (1245)
T 3qcw_A 487 MLDGHLYLLL-DMGSGTIKIK----ALQKKVNDGEWYHVDFQRDGRS--GTISVNTLRT----PYTAPGESEILDLDDEL 555 (1245)
T ss_dssp EETTEEEEEE-ESSSCEEEEE----SCSSCCCSSCCEEEEEEEETTE--EEEEETTEEE----EEECSSSCCCCCCCSCE
T ss_pred EeCCeEEEEE-ECCCCeEEEe----ecccEecCCCEEEEEEEEecCE--EEEEEccccc----ccccCCCcceeccCCce
Confidence 5678877775 5566654442 3557899999999999887654 4556776421 12233444455666777
Q ss_pred EeecCCC
Q 000135 1552 WVGVRPP 1558 (2087)
Q Consensus 1552 ~~~~~~~ 1558 (2087)
++|--|.
T Consensus 556 ylGG~p~ 562 (1245)
T 3qcw_A 556 YLGGLPE 562 (1245)
T ss_dssp EESSCCS
T ss_pred EEccccc
Confidence 8877664
No 46
>1iwd_A Ervatamin B; cysteine protease, alpha-beta protein, catalytic DYAD, L-DOM domain., hydrolase; 1.63A {Tabernaemontana divaricata} SCOP: d.3.1.1
Probab=52.80 E-value=23 Score=38.34 Aligned_cols=40 Identities=28% Similarity=0.683 Sum_probs=33.8
Q ss_pred cCceeEEEEEEEECCEEEEEEecCCCCCccccCCCCCCCcccchHHhhhhcCCCCCCCCeEEEehh
Q 000135 1927 QGHAYSILQVREVDGHKLVQIRNPWANEVEWNGPWSDSSPEWTDRMKHKLKHVPQSKDGIFWMSWQ 1992 (2087)
Q Consensus 1927 sGHAYSVLDVrEVdG~RLVRLRNPWG~~~EWKGdWSD~S~eWTeeLKkkL~~~~~sDDGeFWMSfE 1992 (2087)
.+||-.|++..+-+|.+.-.+||-||. .| .++|-|||+.+
T Consensus 156 ~~HaV~iVGyg~~~g~~yWivkNSWG~--~W------------------------Ge~Gy~~i~~~ 195 (215)
T 1iwd_A 156 QNHGVVIVGYGTQSGKNYWIVRNSWGQ--NW------------------------GNQGYIWMERN 195 (215)
T ss_dssp CCEEEEEEEEEEETTEEEEEEECSBCT--TS------------------------TBTTEEEEECS
T ss_pred CCEEEEEEEEeccCCccEEEEEeCCCC--Cc------------------------CCCcEEEEEcC
Confidence 489999999987788899999999994 44 35799999876
No 47
>3f75_A Toxopain-2, cathepsin L protease; medical structural genomics of pathogenic protozoa, MSGPP, C protease, parasite, protozoa, hydrolase; 1.99A {Toxoplasma gondii} SCOP: d.3.1.0
Probab=51.69 E-value=18 Score=39.06 Aligned_cols=43 Identities=16% Similarity=0.453 Sum_probs=35.1
Q ss_pred cccCceeEEEEEEEE--CCEEEEEEecCCCCCccccCCCCCCCcccchHHhhhhcCCCCCCCCeEEEehhh
Q 000135 1925 IVQGHAYSILQVREV--DGHKLVQIRNPWANEVEWNGPWSDSSPEWTDRMKHKLKHVPQSKDGIFWMSWQD 1993 (2087)
Q Consensus 1925 LVsGHAYSVLDVrEV--dG~RLVRLRNPWG~~~EWKGdWSD~S~eWTeeLKkkL~~~~~sDDGeFWMSfED 1993 (2087)
-..+||-.|++..+- +|.+.-.+||-||. .| .++|-|||+.+.
T Consensus 163 ~~~~Hav~iVGyg~~~~~g~~ywivkNSWG~--~W------------------------G~~Gy~~i~~~~ 207 (224)
T 3f75_A 163 TDLDHGVLLVGYGTDKESKKDFWIMKNSWGT--GW------------------------GRDGYMYMAMHK 207 (224)
T ss_dssp CCCCEEEEEEEEEEETTTTEEEEEEECSBCT--TS------------------------TBTTEEEEESCS
T ss_pred CccCeEEEEEEEecccCCCCCEEEEECCcCc--ch------------------------hhCCEEEEEcCC
Confidence 346899999999877 68889999999994 44 357999999864
No 48
>1ppo_A Protease omega; hydrolase(thiol protease); 1.80A {Carica papaya} SCOP: d.3.1.1 PDB: 1meg_A*
Probab=50.70 E-value=25 Score=38.06 Aligned_cols=41 Identities=20% Similarity=0.497 Sum_probs=34.1
Q ss_pred cCceeEEEEEEEECCEEEEEEecCCCCCccccCCCCCCCcccchHHhhhhcCCCCCCCCeEEEehhh
Q 000135 1927 QGHAYSILQVREVDGHKLVQIRNPWANEVEWNGPWSDSSPEWTDRMKHKLKHVPQSKDGIFWMSWQD 1993 (2087)
Q Consensus 1927 sGHAYSVLDVrEVdG~RLVRLRNPWG~~~EWKGdWSD~S~eWTeeLKkkL~~~~~sDDGeFWMSfED 1993 (2087)
.+||=.|++..+-+|.+.-.+||-||. .| .++|-|||+.+.
T Consensus 157 ~~HaV~iVGyg~~~g~~ywivkNSWG~--~W------------------------G~~Gy~~i~~~~ 197 (216)
T 1ppo_A 157 VDHAVTAVGYGKSGGKGYILIKNSWGT--AW------------------------GEKGYIRIKRAP 197 (216)
T ss_dssp CCEEEEEEEEEEETTEEEEEEECSBCS--SS------------------------TBTTEEEEECCC
T ss_pred CCEEEEEEEeeccCCccEEEEEeCCCC--Cc------------------------ccCcEEEEEcCC
Confidence 389999999988788899999999994 44 357999998763
No 49
>3asi_A Neurexin-1-alpha; beta-sandwich, cell adhesion, synapse maturation, neuroligin glycosylation, membrane; HET: NAG; 2.30A {Bos taurus}
Probab=50.00 E-value=23 Score=41.14 Aligned_cols=78 Identities=18% Similarity=0.304 Sum_probs=45.9
Q ss_pred ccccceeEEEEEecCCceeeeeeeccccceecCCceEEEEEEEeccccceeeeecccccccccccccccccccccCCceE
Q 000135 1472 IEAGQVGLRLITKGDRQTTVAKDWSISATSIADGRWHIVTMTIDADIGEATCYLDGGFDGYQTGLALSAGNSIWEEGAEV 1551 (2087)
Q Consensus 1472 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1551 (2087)
|+.|++=+++- -|.+.+.+. ..+...+.||+||.|+++.+... .++-.+|+.--. + ...+....+....+
T Consensus 58 L~~G~l~~~~~-~G~g~~~~~---~~s~~~vnDg~WH~V~v~r~~~~-~~~l~VD~~~~~-~----~~~~~~~l~~~~~l 127 (410)
T 3asi_A 58 LVKGYLHYVFD-LGNGANLIK---GSSNKPLNDNQWHNVMISRDTSN-LHTVKIDTKITT-Q----ITAGARNLDLKSDL 127 (410)
T ss_dssp EETTEEEEEEE-SSSCEEEEE---CCCSSCSCSSSCEEEEEEECTTC-EEEEEETTEEEE-E----ECTTCCCCCBCSCE
T ss_pred EECCEEEEEEE-CCCCcEEEE---eccCcEeCCCCeEEEEEEEcCCc-eEEEEECCEece-e----ccCCccceecCCce
Confidence 56788666653 355444331 12456799999999999887532 256678875321 1 11112233445678
Q ss_pred EeecCCCC
Q 000135 1552 WVGVRPPT 1559 (2087)
Q Consensus 1552 ~~~~~~~~ 1559 (2087)
++|=-|+-
T Consensus 128 yvGG~p~~ 135 (410)
T 3asi_A 128 YIGGVAKE 135 (410)
T ss_dssp EESCCCGG
T ss_pred EECccccc
Confidence 88887753
No 50
>3ovx_A Cathepsin S; hydrolase, covalent inhibitor, aldehyde warhead is covalently bound to Cys25, lysosomeal protein; HET: O64; 1.49A {Homo sapiens} SCOP: d.3.1.1 PDB: 2h7j_A* 2f1g_A* 2hh5_B* 2hhn_A* 2hxz_A* 2op3_A* 2frq_A* 2fra_A* 2fq9_A* 2ft2_A* 2fud_A* 2g7y_A* 1ms6_A* 2r9m_A* 2r9n_A* 2r9o_A* 3n3g_A* 3n4c_A* 3mpe_A* 1nqc_A* ...
Probab=48.09 E-value=22 Score=38.27 Aligned_cols=42 Identities=14% Similarity=0.459 Sum_probs=35.0
Q ss_pred ccCceeEEEEEEEECCEEEEEEecCCCCCccccCCCCCCCcccchHHhhhhcCCCCCCCCeEEEehhh
Q 000135 1926 VQGHAYSILQVREVDGHKLVQIRNPWANEVEWNGPWSDSSPEWTDRMKHKLKHVPQSKDGIFWMSWQD 1993 (2087)
Q Consensus 1926 VsGHAYSVLDVrEVdG~RLVRLRNPWG~~~EWKGdWSD~S~eWTeeLKkkL~~~~~sDDGeFWMSfED 1993 (2087)
..+||-.|++..+-+|.+...+||-||. .| .++|-|||+.+.
T Consensus 162 ~~~HaV~iVGyg~~~g~~ywivkNSWG~--~W------------------------G~~Gy~~i~~~~ 203 (218)
T 3ovx_A 162 NVNHGVLVVGYGDLNGKEYWLVKNSWGH--NF------------------------GEEGYIRMARNK 203 (218)
T ss_dssp CCCEEEEEEEEEEETTEEEEEEECSBCT--TS------------------------TBTTEEEEECSS
T ss_pred ccCcEEEEEEEeccCCceEEEEECCCCC--cc------------------------ccCCEEEEecCC
Confidence 4689999999988888899999999994 44 357999998763
No 51
>1h30_A GAS6, growth-arrest-specific protein; laminin G-domain protein, vitamin K-dependent protein, AXL/SKY/MER ligand, laminin G- like domain; 2.2A {Homo sapiens} SCOP: b.29.1.4 b.29.1.4 PDB: 2c5d_A*
Probab=47.55 E-value=24 Score=41.28 Aligned_cols=51 Identities=18% Similarity=0.261 Sum_probs=34.9
Q ss_pred cccccceeEEEEEecCCceeeeeeeccccceecCCceEEEEEEEeccccceeeeecccc
Q 000135 1471 GIEAGQVGLRLITKGDRQTTVAKDWSISATSIADGRWHIVTMTIDADIGEATCYLDGGF 1529 (2087)
Q Consensus 1471 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1529 (2087)
.|+.|++-+++-. |.+..++ .+...+.||+||.|+++.+. .+++-.+||..
T Consensus 93 ~L~~G~l~~~~~~-g~~~~~~-----~~~~~~nDg~WH~V~v~r~~--~~~~L~VD~~~ 143 (422)
T 1h30_A 93 ALRAGRLELQLRY-NGVGRVT-----SSGPVINHGMWQTISVEELA--RNLVIKVNRDA 143 (422)
T ss_dssp EEETTEEEEEEEE-TTEEEEE-----EEEEECCSSCCEEEEEEECS--SEEEEEETTEE
T ss_pred EEECCEEEEEEEC-CCCcEEE-----ecCceecCCCCEEEEEEEcC--CEEEEEECCee
Confidence 3677887776643 4433322 24568999999999998875 45677788763
No 52
>1s4v_A Cysteine endopeptidase; KDEL ER retention signal, endosperm, ricinosomes, SEED germi senescence, hydrolase-hydrolase inhibitor complex; 2.00A {Ricinus communis} SCOP: d.3.1.1
Probab=46.91 E-value=26 Score=38.25 Aligned_cols=40 Identities=25% Similarity=0.514 Sum_probs=33.1
Q ss_pred cCceeEEEEEEEEC-CEEEEEEecCCCCCccccCCCCCCCcccchHHhhhhcCCCCCCCCeEEEehh
Q 000135 1927 QGHAYSILQVREVD-GHKLVQIRNPWANEVEWNGPWSDSSPEWTDRMKHKLKHVPQSKDGIFWMSWQ 1992 (2087)
Q Consensus 1927 sGHAYSVLDVrEVd-G~RLVRLRNPWG~~~EWKGdWSD~S~eWTeeLKkkL~~~~~sDDGeFWMSfE 1992 (2087)
.+||-.|++..+-+ |.+.-.+||-||. .| .++|-|||..+
T Consensus 160 ~~HaV~iVGyg~~~~g~~yWivkNSWG~--~W------------------------Ge~Gy~~i~r~ 200 (229)
T 1s4v_A 160 LDHGVAIVGYGTTIDGTKYWTVKNSWGP--EW------------------------GEKGYIRMERG 200 (229)
T ss_dssp CCEEEEEEEEEECTTSCEEEEEECSBCT--TS------------------------TBTTEEEEECS
T ss_pred CCeEEEEEEeccccCCCCEEEEEeCCCC--Cc------------------------cCCcEEEEEcC
Confidence 48999999998765 7889999999994 44 35799999875
No 53
>3f5v_A DER P 1 allergen; allergy, asthma, DUST mites, glycoprotein, hydrola protease, secreted, thiol protease; HET: P6G; 1.36A {Dermatophagoides pteronyssinus} PDB: 2as8_A 3rvw_A* 3rvx_A 3rvv_A* 3d6s_A*
Probab=46.75 E-value=21 Score=38.53 Aligned_cols=42 Identities=21% Similarity=0.449 Sum_probs=35.0
Q ss_pred cccCceeEEEEEEEECCEEEEEEecCCCCCccccCCCCCCCcccchHHhhhhcCCCCCCCCeEEEehh
Q 000135 1925 IVQGHAYSILQVREVDGHKLVQIRNPWANEVEWNGPWSDSSPEWTDRMKHKLKHVPQSKDGIFWMSWQ 1992 (2087)
Q Consensus 1925 LVsGHAYSVLDVrEVdG~RLVRLRNPWG~~~EWKGdWSD~S~eWTeeLKkkL~~~~~sDDGeFWMSfE 1992 (2087)
-..+||-.|++..+-+|.+...+||-||. .| .++|-|||+..
T Consensus 166 ~~~~HaV~iVGyg~~~g~~ywivkNSWG~--~W------------------------Ge~Gy~~i~r~ 207 (222)
T 3f5v_A 166 QPNYHAVNIVGYSNAQGVDYWIVRNSWDT--NW------------------------GDNGYGYFAAN 207 (222)
T ss_dssp SCEEEEEEEEEEEEETTEEEEEEECSBCT--TS------------------------TBTTEEEEECS
T ss_pred CccCcEEEEEEEeccCCCEEEEEEcCCCC--Cc------------------------ccCCEEEEEcC
Confidence 34689999999988888899999999994 44 35799999976
No 54
>3u8e_A Papain-like cysteine protease; papain-like cysteine peptidase, peptidase_C1A, hydrolase, in form; 1.31A {Crocus sativus} SCOP: d.3.1.0
Probab=46.37 E-value=28 Score=37.69 Aligned_cols=41 Identities=20% Similarity=0.424 Sum_probs=33.7
Q ss_pred cCceeEEEEEEEEC-CEEEEEEecCCCCCccccCCCCCCCcccchHHhhhhcCCCCCCCCeEEEehhh
Q 000135 1927 QGHAYSILQVREVD-GHKLVQIRNPWANEVEWNGPWSDSSPEWTDRMKHKLKHVPQSKDGIFWMSWQD 1993 (2087)
Q Consensus 1927 sGHAYSVLDVrEVd-G~RLVRLRNPWG~~~EWKGdWSD~S~eWTeeLKkkL~~~~~sDDGeFWMSfED 1993 (2087)
.+||-.|++..+-+ |.+...+||-||. .| .++|-|||..+.
T Consensus 160 ~~HaV~iVGyg~~~~g~~yWivkNSWG~--~W------------------------Ge~Gy~~i~r~~ 201 (222)
T 3u8e_A 160 VDHTVLIVGYGSNGTNADYWIVKNSWGT--EW------------------------GIDGYILIRRNT 201 (222)
T ss_dssp CCEEEEEEEEEESSTTCEEEEEECSBCT--TS------------------------TBTTEEEEECSC
T ss_pred CCEEEEEEEEeecCCCCcEEEEECCCCC--Cc------------------------ccCCEEEEEcCC
Confidence 48999999998766 7889999999994 44 357999998754
No 55
>3kwz_A Cathepsin K; enzyme inhibitor, covalent reversible inhibitor, disease mutation, disulfide bond, glycoprotein, hydrolase, lysosome, protease; HET: KWZ; 1.49A {Homo sapiens} PDB: 1au0_A* 1au2_A* 1au3_A* 1au4_A* 1ayu_A* 1ayv_A* 1ayw_A* 1bgo_A* 1atk_A* 1nl6_A* 1nlj_A* 1q6k_A* 1mem_A* 1yk7_A* 1yk8_A* 1yt7_A* 2ato_A* 2aux_A* 2auz_A* 2bdl_A* ...
Probab=46.00 E-value=25 Score=37.69 Aligned_cols=41 Identities=24% Similarity=0.445 Sum_probs=34.3
Q ss_pred ccCceeEEEEEEEECCEEEEEEecCCCCCccccCCCCCCCcccchHHhhhhcCCCCCCCCeEEEehh
Q 000135 1926 VQGHAYSILQVREVDGHKLVQIRNPWANEVEWNGPWSDSSPEWTDRMKHKLKHVPQSKDGIFWMSWQ 1992 (2087)
Q Consensus 1926 VsGHAYSVLDVrEVdG~RLVRLRNPWG~~~EWKGdWSD~S~eWTeeLKkkL~~~~~sDDGeFWMSfE 1992 (2087)
..+||-.|++..+-+|.+.-.+||-||. .| .++|-|||...
T Consensus 159 ~~~HaV~iVGyg~~~g~~yWivkNSWG~--~W------------------------G~~Gy~~i~r~ 199 (215)
T 3kwz_A 159 NLNHAVLAVGYGIQKGNKHWIIKNSWGE--NW------------------------GNKGYILMARN 199 (215)
T ss_dssp CCCEEEEEEEEEEETTEEEEEEECSBCT--TS------------------------TBTTEEEEESS
T ss_pred hhhCEEEEEEEeccCCceEEEEECCcCc--cc------------------------ccCCEEEEecC
Confidence 4589999999988788899999999994 44 35799999875
No 56
>3qsd_A Cathepsin B-like peptidase (C01 family); cysteine peptidase, digestive tract, hydrolase-hydrolase INH complex; HET: 074; 1.30A {Schistosoma mansoni} SCOP: d.3.1.0 PDB: 3s3q_A* 3s3r_A*
Probab=41.56 E-value=24 Score=39.04 Aligned_cols=27 Identities=26% Similarity=0.364 Sum_probs=24.0
Q ss_pred cCceeEEEEEEEECCEEEEEEecCCCC
Q 000135 1927 QGHAYSILQVREVDGHKLVQIRNPWAN 1953 (2087)
Q Consensus 1927 sGHAYSVLDVrEVdG~RLVRLRNPWG~ 1953 (2087)
.+||-.|++.-+-+|.+.-.+||-||.
T Consensus 199 ~~Hav~iVGyg~~~g~~ywivkNSWG~ 225 (254)
T 3qsd_A 199 GGHAIRIIGWGVENKAPYWLIANSWNE 225 (254)
T ss_dssp EEEEEEEEEEEEETTEEEEEEECSBCT
T ss_pred CCeEEEEEEEeecCCeeEEEEEeCCCC
Confidence 489999999988788899999999994
No 57
>2fo5_A Cysteine proteinase EP-B 2; EP-B2, EPB2, EPB, cysteine endoprotease, endopeptidase, LEUP hydrolase; HET: AR7; 2.20A {Hordeum vulgare}
Probab=38.88 E-value=40 Score=37.94 Aligned_cols=41 Identities=17% Similarity=0.486 Sum_probs=33.5
Q ss_pred cCceeEEEEEEEE-CCEEEEEEecCCCCCccccCCCCCCCcccchHHhhhhcCCCCCCCCeEEEehhh
Q 000135 1927 QGHAYSILQVREV-DGHKLVQIRNPWANEVEWNGPWSDSSPEWTDRMKHKLKHVPQSKDGIFWMSWQD 1993 (2087)
Q Consensus 1927 sGHAYSVLDVrEV-dG~RLVRLRNPWG~~~EWKGdWSD~S~eWTeeLKkkL~~~~~sDDGeFWMSfED 1993 (2087)
.+||=.|++.-+- +|.+.-.+||-||. .| .++|-|||+.+.
T Consensus 165 ~~HaV~IVGyg~~~~G~~YWivkNSWG~--~W------------------------Ge~GY~ri~r~~ 206 (262)
T 2fo5_A 165 LDHGVAVVGYGVAEDGKAYWTVKNSWGP--SW------------------------GEQGYIRVEKDS 206 (262)
T ss_dssp CCEEEEEEEEEECTTSCEEEEEECSBCT--TS------------------------TBTTEEEEESSC
T ss_pred CCEEEEEEEEcccCCCceEEEEEeCCCC--CC------------------------CCCeEEEEEcCC
Confidence 3899999999876 48899999999994 44 357999998763
No 58
>2fe0_A SMP-1, small myristoylated protein 1; beta sheet, protein transport, membrane protein; NMR {Leishmania major} SCOP: b.134.1.1
Probab=38.13 E-value=6 Score=41.62 Aligned_cols=41 Identities=15% Similarity=0.111 Sum_probs=35.6
Q ss_pred CcceeeccccccccccccccCccccCcccceeeccchhhhhhc
Q 000135 1631 PADVDLYDRDDIDWDGQYSSGRKRRADRDGIVVNVDSFARKFR 1673 (2087)
Q Consensus 1631 ~a~v~ly~rE~v~~~~q~ssGrk~~~~rd~i~ldmDsf~RKlr 1673 (2087)
.+++.+||-||+.+..+.++|++.+ -++++++-++++++-+
T Consensus 93 ~a~vvV~P~eT~~Fv~G~vnGf~~~--~~A~pls~~y~~~~~~ 133 (136)
T 2fe0_A 93 VASVVVYPCETEMFIEGRVNGFKSK--MDALPLSEEYRQHQAE 133 (136)
T ss_dssp EEEEEECTTCEEEEEEECCCSEEEE--EEEEECCHHHHHHHHH
T ss_pred EEEEEECCcceeEEEEEEecCeEeE--EEEEeCCHHHHHHHHh
Confidence 5889999999999999999999996 7788888888777653
No 59
>1pxv_A Cysteine protease; hydrolase; 1.80A {Staphylococcus aureus} SCOP: d.3.1.1 PDB: 1y4h_A
Probab=37.32 E-value=53 Score=36.23 Aligned_cols=33 Identities=18% Similarity=0.442 Sum_probs=29.7
Q ss_pred cccCcccCceeEEEEEEEECCEEEEEEecCCCC
Q 000135 1921 SSSGIVQGHAYSILQVREVDGHKLVQIRNPWAN 1953 (2087)
Q Consensus 1921 es~GLVsGHAYSVLDVrEVdG~RLVRLRNPWG~ 1953 (2087)
..++...+||-+|.+-...++.+.+-+-|||-+
T Consensus 122 ~~~~~~~gHA~av~Gya~~~~~~~y~~WNPW~~ 154 (183)
T 1pxv_A 122 NPNDPHLGHALAVVGNAKINDQEKLIYWNPWDT 154 (183)
T ss_dssp STTSCCCEEEEEEEEEEEETTEEEEEEECTTCS
T ss_pred CCCCccCceeEEEEeeeecCCCeEEEEeCCccC
Confidence 467888999999999999999999999999964
No 60
>2b1m_A SPE31; papain-like, sugar binding protein; HET: NAG FUC PG4; 2.00A {Pachyrhizus erosus} PDB: 2b1n_A*
Probab=37.20 E-value=39 Score=37.49 Aligned_cols=41 Identities=22% Similarity=0.440 Sum_probs=34.5
Q ss_pred cCceeEEEEEEEECCEEEEEEecCCCCCccccCCCCCCCcccchHHhhhhcCCCCCCCCeEEEehhh
Q 000135 1927 QGHAYSILQVREVDGHKLVQIRNPWANEVEWNGPWSDSSPEWTDRMKHKLKHVPQSKDGIFWMSWQD 1993 (2087)
Q Consensus 1927 sGHAYSVLDVrEVdG~RLVRLRNPWG~~~EWKGdWSD~S~eWTeeLKkkL~~~~~sDDGeFWMSfED 1993 (2087)
.+||=.|++.-+-+|.+.-.+||-||. .| .++|-|||..++
T Consensus 166 ~~HaV~iVGyg~~~g~~yWivkNSWG~--~W------------------------Ge~Gy~~i~~~~ 206 (246)
T 2b1m_A 166 INHFVLIVGYGSEDGVDYWIAKNSWGE--DW------------------------GIDGYIRIQRNT 206 (246)
T ss_dssp CCEEEEEEEEEEETTEEEEEEECSBCT--TS------------------------TBTTEEEEECCS
T ss_pred CceEEEEEEEeccCCceEEEEEeCCCC--cc------------------------cCCcEEEEEcCC
Confidence 599999999987788899999999994 44 357999998864
No 61
>3i06_A Cruzipain; autocatalytic cleavage, glycoprotein, protease, thiol protease, zymogen; HET: QL2; 1.10A {Trypanosoma cruzi} SCOP: d.3.1.1 PDB: 1ewm_A* 1ewo_A* 1ewl_A* 1f29_A* 1ewp_A* 1f2b_A* 1f2c_A* 1f2a_A* 1me4_A* 1u9q_X* 2aim_A* 2efm_A* 2oz2_A* 1me3_A* 3kku_A* 3lxs_A* 1aim_A* 3iut_A* 3hd3_A* 2p86_A* ...
Probab=36.77 E-value=31 Score=37.27 Aligned_cols=40 Identities=15% Similarity=0.420 Sum_probs=32.6
Q ss_pred cCceeEEEEEEEECCEEEEEEecCCCCCccccCCCCCCCcccchHHhhhhcCCCCCCCCeEEEehh
Q 000135 1927 QGHAYSILQVREVDGHKLVQIRNPWANEVEWNGPWSDSSPEWTDRMKHKLKHVPQSKDGIFWMSWQ 1992 (2087)
Q Consensus 1927 sGHAYSVLDVrEVdG~RLVRLRNPWG~~~EWKGdWSD~S~eWTeeLKkkL~~~~~sDDGeFWMSfE 1992 (2087)
.+||=.|++..+-+|.+.-.+||-||. .| .++|-|||...
T Consensus 160 ~~HaV~iVGyg~~~g~~yWivkNSWG~--~W------------------------Ge~Gy~~i~rg 199 (215)
T 3i06_A 160 LDHGVLLVGYNDSAAVPYWIIKNSWTT--QW------------------------GEEGYIRIAKG 199 (215)
T ss_dssp CCEEEEEEEEESSSSSCEEEEECSBCT--TS------------------------TBTTEEEEESS
T ss_pred cCcEEEEEEEeccCCcEEEEEECCCCC--Cc------------------------ccCceEEEecC
Confidence 489999999986667788999999994 44 35799999875
No 62
>1ms9_A Trans-sialidase; trans-glycosylation, protein-acrbohydrate interac beta-propeller, hydrolase; HET: LAT; 1.58A {Trypanosoma cruzi} SCOP: b.29.1.15 b.68.1.1 PDB: 1ms0_A* 1mr5_A* 1ms1_A 1ms4_A 1ms8_A* 1ms3_A* 2ah2_A* 3b69_A* 3opz_A 3pjq_A* 1s0i_A* 1s0j_A* 1ms5_A 1wcs_A 2ags_A* 2a75_A* 2fhr_A* 1n1t_A* 1n1s_A* 1n1v_A* ...
Probab=36.30 E-value=48 Score=42.10 Aligned_cols=82 Identities=22% Similarity=0.294 Sum_probs=50.9
Q ss_pred CCceEEEEEEEeccccceeeeecccccccccccccccccccccCCceEEeecCCCCccccccCCCccccccchhhheehh
Q 000135 1504 DGRWHIVTMTIDADIGEATCYLDGGFDGYQTGLALSAGNSIWEEGAEVWVGVRPPTDMDVFGRSDSEGAESKMHIMDVFL 1583 (2087)
Q Consensus 1504 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1583 (2087)
-++-|.|.+..+ .|+.+.|+||---|-..-.++.... -.+=....+|-- |.+. ++-++.+-.-.|||
T Consensus 555 ~~~~~qv~l~l~--~~~~s~yvdg~~~~~~~~~~~~~~~--~~~ishfy~g~~--------~~~~-~~~~~~vtv~nv~l 621 (648)
T 1ms9_A 555 MGKRYHVVLTMA--NKIGSVYIDGEPLEGSGQTVVPDER--TPDISHFYVGGY--------KRSG-MPTDSRVTVNNVLL 621 (648)
T ss_dssp TTCEEEEEEEEE--TTEEEEEETTEECTTCCEECSCSSC--CCCCCEEEESSC--------SCTT-SCCCCCEEEEEEEE
T ss_pred CCcceEEEEEEe--CCcEEEEECCEEecCCcccccccCC--CcccceEEEcCC--------CCCC-cccCCCEEEEEeeE
Confidence 467799999997 4599999999754311111221111 111123333321 1111 12346788899999
Q ss_pred hcccCChHHHHHHhh
Q 000135 1584 WGRCLTEDEIASLYS 1598 (2087)
Q Consensus 1584 ~~~cLtedEi~~~~~ 1598 (2087)
.-|.|+++||.+|+.
T Consensus 622 ynr~l~~~e~~~~~~ 636 (648)
T 1ms9_A 622 YNRQLNAEEIRTLFL 636 (648)
T ss_dssp ESSCCCHHHHHHHHH
T ss_pred ecCCCCHHHHhhhcc
Confidence 999999999999985
No 63
>2wjs_A Laminin subunit alpha-2; integrin, secreted, coiled coil, glycoprotein, laminin EGF-like domain, extracellular matrix, laminin G-like domain; HET: NAG; 2.80A {Mus musculus}
Probab=34.67 E-value=71 Score=39.02 Aligned_cols=79 Identities=15% Similarity=0.181 Sum_probs=46.9
Q ss_pred ccccceeEEEEEecCCceeeeeeeccccceecCCceEEEEEEEeccccceeeeeccccccc-------cccccccccccc
Q 000135 1472 IEAGQVGLRLITKGDRQTTVAKDWSISATSIADGRWHIVTMTIDADIGEATCYLDGGFDGY-------QTGLALSAGNSI 1544 (2087)
Q Consensus 1472 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~ 1544 (2087)
|+.|++=++. .-|.+.+++. +....+.||+||.|+++-+.. .++-.+|+..... ..+ ..+.....
T Consensus 64 L~~G~l~~~~-~~G~g~~~l~----~~~~~~~dg~WH~V~v~r~~~--~~~l~Vd~~~~~~~~~~~~~~~~-~~~g~~~~ 135 (608)
T 2wjs_A 64 MRKGKVSFLW-DVGSGVGRVE----YPDLTIDDSYWYRIEASRTGR--NGSISVRALDGPKASMVPSTYHS-VSPPGYTI 135 (608)
T ss_dssp EETTEEEEEE-ESSSCEEEEE----CCSCCCTTSCCEEEEEEEETT--EEEEEEEESSSTTTTSCCCCEEE-ECCSSCCS
T ss_pred EECCEEEEEE-ECCCCceEEe----eCCccccCCceEEEEEEEeCC--EEEEEEecccCcccccccccccc-ccCCccee
Confidence 6788887754 4576666553 224579999999999887754 4556778754211 111 12333334
Q ss_pred ccCC--ceEEeecCCC
Q 000135 1545 WEEG--AEVWVGVRPP 1558 (2087)
Q Consensus 1545 ~~~~--~~~~~~~~~~ 1558 (2087)
.+.. +.+++|=-|+
T Consensus 136 L~l~~~~~l~vGG~p~ 151 (608)
T 2wjs_A 136 LDVDANAMLFVGGLTG 151 (608)
T ss_dssp CCCCSSCEEEESSCCT
T ss_pred eccCCCCcEEeCCcCc
Confidence 4332 5688886664
No 64
>1m6d_A Cathepsin F, catsf; papain family cysteine protease, hydrolase; HET: MYP; 1.70A {Homo sapiens} SCOP: d.3.1.1
Probab=33.94 E-value=51 Score=35.58 Aligned_cols=41 Identities=17% Similarity=0.520 Sum_probs=34.2
Q ss_pred ccCceeEEEEEEEECCEEEEEEecCCCCCccccCCCCCCCcccchHHhhhhcCCCCCCCCeEEEehh
Q 000135 1926 VQGHAYSILQVREVDGHKLVQIRNPWANEVEWNGPWSDSSPEWTDRMKHKLKHVPQSKDGIFWMSWQ 1992 (2087)
Q Consensus 1926 VsGHAYSVLDVrEVdG~RLVRLRNPWG~~~EWKGdWSD~S~eWTeeLKkkL~~~~~sDDGeFWMSfE 1992 (2087)
..+||=.|++..+-+|.+.-.+||-||. .| .++|-|||...
T Consensus 158 ~~~HaV~iVGyg~~~g~~yWivkNSWG~--~W------------------------Ge~Gy~~i~r~ 198 (214)
T 1m6d_A 158 LIDHAVLLVGYGQRSDVPFWAIKNSWGT--DW------------------------GEKGYYYLHRG 198 (214)
T ss_dssp CCCEEEEEEEEEEETTEEEEEEECSBCT--TS------------------------TBTTEEEEESS
T ss_pred cCCEEEEEEEEeecCCcEEEEEEeCCCC--Cc------------------------ccCcEEEEEcC
Confidence 4589999999988788899999999994 44 35799999875
No 65
>2e01_A Cysteine proteinase 1; bleomycin hydrolase, thiol protease, C1 protease, hydrolase; 1.73A {Saccharomyces cerevisiae} PDB: 2e02_A 2e03_A 2dzy_A 1a6r_A 2e00_A 2dzz_A 3gcb_A 1gcb_A
Probab=32.84 E-value=1.1e+02 Score=37.55 Aligned_cols=46 Identities=20% Similarity=0.287 Sum_probs=35.5
Q ss_pred cCceeEEEEEEEE-CCE--EEEEEecCCCCCccccCCCCCCCcccchHHhhhhcCCCCCCCCeEEEehhhhhhcc
Q 000135 1927 QGHAYSILQVREV-DGH--KLVQIRNPWANEVEWNGPWSDSSPEWTDRMKHKLKHVPQSKDGIFWMSWQDFQIHF 1998 (2087)
Q Consensus 1927 sGHAYSVLDVrEV-dG~--RLVRLRNPWG~~~EWKGdWSD~S~eWTeeLKkkL~~~~~sDDGeFWMSfEDFLkyF 1998 (2087)
.+||-.|+++..- +|. +.-+++|-||. .| .++|-|+|+-+-|-.|-
T Consensus 371 ~~HAmlivGyg~d~~G~~p~yW~VkNSWG~--~w------------------------G~~GY~~ms~~wf~ey~ 419 (457)
T 2e01_A 371 MTAAMLITGCHVDETSKLPLRYRVENSWGK--DS------------------------GKDGLYVMTQKYFEEYC 419 (457)
T ss_dssp CCEEEEEEEEEECTTTCCEEEEEEECSSCT--TS------------------------TBTTEEEEEHHHHHHHE
T ss_pred CCeEEEEEEEEeccCCCccCEEEEEeCccC--Cc------------------------CCCceEEeehhhHhhcc
Confidence 4799999999875 577 89999999994 33 35799999987655443
No 66
>1lpl_A Hypothetical 25.4 kDa protein F53F4.3 in chromosome V; structural genomics, CAP-Gly domain, cytoskeleton, tubulin, PSI; 1.77A {Caenorhabditis elegans} SCOP: b.34.10.1 PDB: 1tov_A
Probab=32.83 E-value=50 Score=32.86 Aligned_cols=74 Identities=28% Similarity=0.421 Sum_probs=55.3
Q ss_pred ceeEEEEEe--c--CCceeeeeeeccccceecCCceEEEEEEEeccccceeeeecccccc--c-ccccccccccccccCC
Q 000135 1476 QVGLRLITK--G--DRQTTVAKDWSISATSIADGRWHIVTMTIDADIGEATCYLDGGFDG--Y-QTGLALSAGNSIWEEG 1548 (2087)
Q Consensus 1476 ~~~~~~~~~--~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~~~~~~~~~~~~ 1548 (2087)
+||=|.... | .+.-|| .+||.+.-+.|.| +-|..|...| .=||-++| | +| ..+.|+.-+-
T Consensus 13 ~vG~rv~V~~~g~~~~~GtV---ryvG~~~~~~G~w--vGVElDep~G----KnDGsv~G~rYF~C----~p~~G~Fvr~ 79 (95)
T 1lpl_A 13 MVGNRCEVTVGAQMARRGEV---AYVGATKFKEGVW--VGVKYDEPVG----KNDGSVAGVRYFDC----DPKYGGFVRP 79 (95)
T ss_dssp CTTCEEEECCTTSCCEEEEE---EEEECCSSSSSCE--EEEEESSSCS----SBSSEETTEECSCC----CTTSEEEECG
T ss_pred CCCCEEEEccCCCCceEEEE---EEecccCCCCCEE--EEEEccCCCC----ccCCEECCEEEeEe----CCCEEEEEcH
Confidence 577676654 4 344455 5899999999999 7778886654 47888888 3 44 4567888888
Q ss_pred ceEEeecCCCCccc
Q 000135 1549 AEVWVGVRPPTDMD 1562 (2087)
Q Consensus 1549 ~~~~~~~~~~~~~~ 1562 (2087)
..|=+|-=||.|+|
T Consensus 80 ~~v~~gdfp~~d~~ 93 (95)
T 1lpl_A 80 VDVKVGDFPELSID 93 (95)
T ss_dssp GGEEESCCCCCCCS
T ss_pred HHceECCCCCCCcc
Confidence 89999988999964
No 67
>2oul_A Falcipain 2; cysteine protease, inhibitor, macromolecular interaction, HY hydrolase inhibitor complex; 2.20A {Plasmodium falciparum} SCOP: d.3.1.1 PDB: 2ghu_A 1yvb_A 3bpf_A* 3pnr_A
Probab=32.75 E-value=42 Score=36.94 Aligned_cols=41 Identities=20% Similarity=0.469 Sum_probs=32.8
Q ss_pred cCceeEEEEEEEEC----------CEEEEEEecCCCCCccccCCCCCCCcccchHHhhhhcCCCCCCCCeEEEehhh
Q 000135 1927 QGHAYSILQVREVD----------GHKLVQIRNPWANEVEWNGPWSDSSPEWTDRMKHKLKHVPQSKDGIFWMSWQD 1993 (2087)
Q Consensus 1927 sGHAYSVLDVrEVd----------G~RLVRLRNPWG~~~EWKGdWSD~S~eWTeeLKkkL~~~~~sDDGeFWMSfED 1993 (2087)
.+||=.|++..+-+ |.+.-.+||-||. .| .++|-|||..++
T Consensus 172 ~~HaV~iVGyg~~~~~~~~~~~~~g~~yWivkNSWG~--~W------------------------Ge~Gy~~i~~~~ 222 (241)
T 2oul_A 172 LNHAVMLVGFGMKEIVNPLTKKGEKHYYYIIKNSWGQ--QW------------------------GERGFINIETDE 222 (241)
T ss_dssp CCEEEEEEEEEEEEEECTTTCSEEEEEEEEEECSBCT--TS------------------------TBTTEEEEEECS
T ss_pred CCEEEEEEEeccccccccccccCCCCCEEEEEeCCCC--Cc------------------------ccCCEEEEEcCC
Confidence 58999999997654 6788999999994 44 357999998764
No 68
>3cbj_A Cathepsin B; cathepsin B, occluding loop, chagas disease, glyco hydrolase, lysosome, protease, thiol protease, zymogen, CYT vesicle; 1.80A {Homo sapiens} PDB: 3cbk_A 1gmy_A* 3ai8_B* 3k9m_A 1the_A* 1cpj_A* 1cte_A 2dcc_A* 2dc6_A* 1ito_A* 2dc8_A* 2dc9_A* 2dca_A* 2dcb_A* 2dc7_A* 2dcd_A* 1qdq_A* 1csb_B* 1huc_B 2ipp_B ...
Probab=32.48 E-value=39 Score=37.69 Aligned_cols=41 Identities=27% Similarity=0.554 Sum_probs=33.9
Q ss_pred ccCceeEEEEEEEECCEEEEEEecCCCCCccccCCCCCCCcccchHHhhhhcCCCCCCCCeEEEehh
Q 000135 1926 VQGHAYSILQVREVDGHKLVQIRNPWANEVEWNGPWSDSSPEWTDRMKHKLKHVPQSKDGIFWMSWQ 1992 (2087)
Q Consensus 1926 VsGHAYSVLDVrEVdG~RLVRLRNPWG~~~EWKGdWSD~S~eWTeeLKkkL~~~~~sDDGeFWMSfE 1992 (2087)
..+||=.|++.-+-+|.+.-.+||-||. .| .++|-|+|...
T Consensus 202 ~~~HaV~iVGyg~~~g~~yWivkNSWG~--~W------------------------Ge~Gy~~i~rg 242 (266)
T 3cbj_A 202 MGGHAIRILGWGVENGTPYWLVANSWNT--DW------------------------GDNGFFKILRG 242 (266)
T ss_dssp EEEEEEEEEEEEEETTEEEEEEECSBCT--TS------------------------TBTTEEEEECS
T ss_pred cCCeEEEEEEecccCCceEEEEEcCCCC--cc------------------------CCCCEEEEEcC
Confidence 3489999999988788899999999994 44 35799999876
No 69
>3bwk_A Cysteine protease falcipain-3; malaria, hydrolase; HET: C1P; 2.42A {Plasmodium falciparum} PDB: 3bpm_A*
Probab=31.79 E-value=45 Score=36.79 Aligned_cols=41 Identities=20% Similarity=0.435 Sum_probs=32.8
Q ss_pred cCceeEEEEEEEEC----------CEEEEEEecCCCCCccccCCCCCCCcccchHHhhhhcCCCCCCCCeEEEehhh
Q 000135 1927 QGHAYSILQVREVD----------GHKLVQIRNPWANEVEWNGPWSDSSPEWTDRMKHKLKHVPQSKDGIFWMSWQD 1993 (2087)
Q Consensus 1927 sGHAYSVLDVrEVd----------G~RLVRLRNPWG~~~EWKGdWSD~S~eWTeeLKkkL~~~~~sDDGeFWMSfED 1993 (2087)
.+||=.|++..+-+ |.+.-.+||-||. .| .++|-|||+.++
T Consensus 174 ~~HaV~iVGyg~~~~~~~~~~~~~g~~yWivkNSWG~--~W------------------------Ge~Gy~~i~~~~ 224 (243)
T 3bwk_A 174 PNHAVILVGYGMKDIYNEDTGRMEKFYYYIIKNSWGS--DW------------------------GEGGYINLETDE 224 (243)
T ss_dssp CCEEEEEEEEEEEEEECTTTCSEEEEEEEEEECSBCT--TS------------------------TBTTEEEEEECS
T ss_pred CCeEEEEEEecCccccccccccCCCCCEEEEEeCCCC--Cc------------------------CCCcEEEEEcCC
Confidence 58999999997654 6788999999994 44 357999998764
No 70
>1deu_A Procathepsin X; cysteine protease, proregion, prosegment, HY; 1.70A {Homo sapiens} SCOP: d.3.1.1 PDB: 1ef7_A
Probab=31.32 E-value=56 Score=36.87 Aligned_cols=43 Identities=21% Similarity=0.443 Sum_probs=35.6
Q ss_pred ccCceeEEEEEEEECCEEEEEEecCCCCCccccCCCCCCCcccchHHhhhhcCCCCCCCCeEEEehhhh
Q 000135 1926 VQGHAYSILQVREVDGHKLVQIRNPWANEVEWNGPWSDSSPEWTDRMKHKLKHVPQSKDGIFWMSWQDF 1994 (2087)
Q Consensus 1926 VsGHAYSVLDVrEVdG~RLVRLRNPWG~~~EWKGdWSD~S~eWTeeLKkkL~~~~~sDDGeFWMSfEDF 1994 (2087)
..+||-.|++.-+-+|.+.-.+||-||. .| .++|.|||....-
T Consensus 212 ~~~HaV~iVGyg~~~g~~YWivkNSWG~--~W------------------------Ge~GY~~i~rg~n 254 (277)
T 1deu_A 212 YINHVVSVAGWGISDGTEYWIVRNSWGE--PW------------------------GERGWLRIVTSTY 254 (277)
T ss_dssp CCCEEEEEEEEEEETTEEEEEEECSBCT--TS------------------------TBTTEEEEECTTH
T ss_pred cCCeEEEEEEecccCCccEEEEEeCCCC--cc------------------------CCCcEEEEEcCCC
Confidence 4689999999987788899999999994 44 3579999998764
No 71
>2xu3_A Cathepsin L1; hydrolase, drug design, thiol protease; HET: XU3 BTB; 0.90A {Homo sapiens} PDB: 2xu4_A* 2xu5_A* 2yj2_A* 2yj8_A* 2yj9_A* 2yjb_A* 2yjc_A* 3bc3_A* 3h89_A* 3h8b_A* 3h8c_A* 3of9_A* 3of8_A* 3hha_A* 2xu1_A* 3iv2_A* 3k24_A* 2nqd_B* 3kse_A* 2vhs_A ...
Probab=30.37 E-value=38 Score=36.65 Aligned_cols=42 Identities=21% Similarity=0.392 Sum_probs=33.1
Q ss_pred ccCceeEEEEEEE----ECCEEEEEEecCCCCCccccCCCCCCCcccchHHhhhhcCCCCCCCCeEEEehhh
Q 000135 1926 VQGHAYSILQVRE----VDGHKLVQIRNPWANEVEWNGPWSDSSPEWTDRMKHKLKHVPQSKDGIFWMSWQD 1993 (2087)
Q Consensus 1926 VsGHAYSVLDVrE----VdG~RLVRLRNPWG~~~EWKGdWSD~S~eWTeeLKkkL~~~~~sDDGeFWMSfED 1993 (2087)
..+||-.|++..+ -+|.+.-.+||-||. .| .++|-|||+.+.
T Consensus 160 ~~~HaV~iVGygd~~~~~~g~~yWivkNSWG~--~W------------------------G~~Gy~~i~~~~ 205 (220)
T 2xu3_A 160 DMDHGVLVVGYGFESTESDNNKYWLVKNSWGE--EW------------------------GMGGYVKMAKDR 205 (220)
T ss_dssp CCCEEEEEEEEEECCCSSSCCEEEEEECSBCT--TS------------------------TBTTEEEEECSS
T ss_pred CCCeEEEEEEcCCccccCCCCcEEEEEeCCCC--Cc------------------------ccCcEEEEecCC
Confidence 4689999999983 347789999999994 44 357999998764
No 72
>3qt4_A Cathepsin-L-like midgut cysteine proteinase; hydrolase, zymogen, intramolecular DISS bonds, insect larVal midgut; HET: PG4 PG6; 2.11A {Tenebrio molitor}
Probab=29.50 E-value=77 Score=36.90 Aligned_cols=42 Identities=14% Similarity=0.377 Sum_probs=34.6
Q ss_pred ccCceeEEEEEEEECCEEEEEEecCCCCCccccCCCCCCCcccchHHhhhhcCCCCCCCCeEEEehhh
Q 000135 1926 VQGHAYSILQVREVDGHKLVQIRNPWANEVEWNGPWSDSSPEWTDRMKHKLKHVPQSKDGIFWMSWQD 1993 (2087)
Q Consensus 1926 VsGHAYSVLDVrEVdG~RLVRLRNPWG~~~EWKGdWSD~S~eWTeeLKkkL~~~~~sDDGeFWMSfED 1993 (2087)
..+||-.|++.-+-+|.+.-.+||-||. .| .++|-|||.-..
T Consensus 273 ~~~HaV~iVGyg~~~g~~yWivkNSWG~--~W------------------------Ge~GY~~i~r~~ 314 (329)
T 3qt4_A 273 DLNHGVLVVGYGSDNGQDYWILKNSWGS--GW------------------------GESGYWRQVRNY 314 (329)
T ss_dssp CCCEEEEEEEEEEETTEEEEEEECSBCT--TS------------------------TBTTEEEEESSS
T ss_pred cCCEEEEEEEEEeeCCccEEEEEeCCCC--cc------------------------cCCcEEEEEeCC
Confidence 4589999999988788899999999994 44 357999998753
No 73
>1h30_A GAS6, growth-arrest-specific protein; laminin G-domain protein, vitamin K-dependent protein, AXL/SKY/MER ligand, laminin G- like domain; 2.2A {Homo sapiens} SCOP: b.29.1.4 b.29.1.4 PDB: 2c5d_A*
Probab=29.15 E-value=92 Score=36.43 Aligned_cols=57 Identities=19% Similarity=0.259 Sum_probs=31.9
Q ss_pred ceecCCceEEEEEEEeccccceeeeecccccccccc---cc--cccccccccCCceEEeecCCC
Q 000135 1500 TSIADGRWHIVTMTIDADIGEATCYLDGGFDGYQTG---LA--LSAGNSIWEEGAEVWVGVRPP 1558 (2087)
Q Consensus 1500 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~--~~~~~~~~~~~~~~~~~~~~~ 1558 (2087)
..+.||+||.|++++-.+-.+ --+|+...-...+ +| +....-.++.+..+++|=-|.
T Consensus 311 ~~l~DG~WH~V~~~l~~~~~~--L~vD~~~~~~~~~~~~~~~~~~~~~~~l~~~~~lyiGG~p~ 372 (422)
T 1h30_A 311 IKVCDGQEHVVTVSLRDGEAT--LEVDGTRGQSEVSAAQLQERLAVLERHLRSPVLTFAGGLPD 372 (422)
T ss_dssp CCTTSSCCEEEEEEEETTEEE--EEETTEECEESSCHHHHHHHHHHHHHHHTSCCEEEESCCCS
T ss_pred ecccCCCEeEeEEEEEEeccE--EEEeCCccceeechhhcccchhhhhhhhccCCceEEcccCC
Confidence 679999999996655555444 5577653221111 11 110011245666788887775
No 74
>2lnm_A Protein TIC 40, chloroplastic; translocon, import, TIC40-NP, protein transport; NMR {Arabidopsis thaliana}
Probab=26.34 E-value=64 Score=29.44 Aligned_cols=49 Identities=10% Similarity=0.302 Sum_probs=38.9
Q ss_pred HHHHhhcChhhHHHHhhhcccCchHhHhhhhhcCCCcchhhhhcccCCChHHHHHhhc
Q 000135 505 AFQERLNDPRITSMLKKRAREGDRELTSLLQDKGLDPNFAMMLKEKSLDPTILALLQR 562 (2087)
Q Consensus 505 ~fq~~~~~p~~~~~lk~~~~~g~~el~~llqdkgldpnfa~mlke~~ldp~ilallqr 562 (2087)
.++.-++||++.++|+ |.|....|||--=||.-..... -||++...+++
T Consensus 4 ~~~kl~~dPe~~~~m~------dP~~~~~lq~i~~NP~~~~~~~---~dP~v~~~~~~ 52 (62)
T 2lnm_A 4 VISKIMENPDVAMAFQ------NPRVQAALMECSENPMNIMKYQ---NDKEVMDVFNK 52 (62)
T ss_dssp HHHHHTTSHHHHHHTT------SHHHHHHHHHHTTCGGGHHHHT---TCHHHHHHHHH
T ss_pred HHHHHHcChHHHHHcC------CHHHHHHHHHHHHCHHHHHHHH---hChHHHHHHHH
Confidence 3677789999999997 7899999999988998554322 29999887765
No 75
>1xkg_A DER P I, major mite fecal allergen DER P 1; major allergen, cysteine protease, house DUST mite, dermatop pteronyssinus; 1.61A {Dermatophagoides pteronyssinus} SCOP: d.3.1.1
Probab=25.44 E-value=71 Score=36.90 Aligned_cols=39 Identities=23% Similarity=0.509 Sum_probs=33.6
Q ss_pred CceeEEEEEEEECCEEEEEEecCCCCCccccCCCCCCCcccchHHhhhhcCCCCCCCCeEEEehh
Q 000135 1928 GHAYSILQVREVDGHKLVQIRNPWANEVEWNGPWSDSSPEWTDRMKHKLKHVPQSKDGIFWMSWQ 1992 (2087)
Q Consensus 1928 GHAYSVLDVrEVdG~RLVRLRNPWG~~~EWKGdWSD~S~eWTeeLKkkL~~~~~sDDGeFWMSfE 1992 (2087)
+||-.|++.-+-+|.+.-.+||-||. .| .++|-|||..+
T Consensus 249 ~HaV~iVGyg~~~g~~yWivkNSWG~--~W------------------------Ge~GY~~i~r~ 287 (312)
T 1xkg_A 249 YHAVNIVGYSNAQGVDYWIVRNSWDT--NW------------------------GDNGYGYFAAN 287 (312)
T ss_dssp EEEEEEEEEEEETTEEEEEEECSBCT--TS------------------------TBTTEEEEECS
T ss_pred ceEEEEEEEeccCCceEEEEEeCCCC--cc------------------------cCCcEEEEEcC
Confidence 89999999988788899999999994 44 35799999986
No 76
>2c0y_A Procathepsin S; proenzyme, proteinase, hydrolase, thiol protease, prosegment binding loop, glycoprotein, lysosome, protease, zymogen; 2.1A {Homo sapiens}
Probab=24.75 E-value=81 Score=36.33 Aligned_cols=41 Identities=15% Similarity=0.466 Sum_probs=34.2
Q ss_pred ccCceeEEEEEEEECCEEEEEEecCCCCCccccCCCCCCCcccchHHhhhhcCCCCCCCCeEEEehh
Q 000135 1926 VQGHAYSILQVREVDGHKLVQIRNPWANEVEWNGPWSDSSPEWTDRMKHKLKHVPQSKDGIFWMSWQ 1992 (2087)
Q Consensus 1926 VsGHAYSVLDVrEVdG~RLVRLRNPWG~~~EWKGdWSD~S~eWTeeLKkkL~~~~~sDDGeFWMSfE 1992 (2087)
..+||-.|++.-+-+|.+.-.+||-||. .| .++|-|||..+
T Consensus 259 ~~~HaV~iVGyg~~~g~~yWivkNSWG~--~W------------------------Ge~GY~~i~r~ 299 (315)
T 2c0y_A 259 NVNHGVLVVGYGDLNGKEYWLVKNSWGH--NF------------------------GEEGYIRMARN 299 (315)
T ss_dssp CCCEEEEEEEEEEETTEEEEEEECSBCT--TS------------------------TBTTEEEEECS
T ss_pred cCCEEEEEEEEeecCCCcEEEEEcCCCC--Cc------------------------CCCcEEEEEcC
Confidence 4599999999987788899999999994 44 35799999875
No 77
>3zr5_A Galactocerebrosidase; hydrolase, GALC, glycosyl hydrolase, krabbe disease, TIM BAR lectin domain; HET: NAG; 2.10A {Mus musculus} PDB: 3zr6_A*
Probab=24.15 E-value=1.8e+02 Score=36.97 Aligned_cols=83 Identities=24% Similarity=0.308 Sum_probs=48.6
Q ss_pred eEEEEEEEeec-CCCceeeecccccchhhhheeecccccccc-----ccceeEEEEEecCCceeeeeeeccccceecCCc
Q 000135 1433 VSFSIAVMIQP-ESGPVCLLGTEFQKKVCWEILVAGSEQGIE-----AGQVGLRLITKGDRQTTVAKDWSISATSIADGR 1506 (2087)
Q Consensus 1433 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1506 (2087)
.+.|+-||+.- ++|=|.|.+. .++.-| ...+.+|+. .|. ++|.-.-.+++++++ +...+.-++
T Consensus 531 ytVs~Dv~~~~~~~g~a~i~~R-v~~~g~----~~~~~~gy~~~i~~~G~--~~l~~~~~~~~vLa~----g~~~~~~~~ 599 (656)
T 3zr5_A 531 MTVQCDVYIETPRSGGVFIAGR-VNKGGI----LIRSATGVFFWIFANGS--YRVTADLGGWITYAS----GHADVTAKR 599 (656)
T ss_dssp EEEEEEEEECSTTTCEEEEEEE-ECCCGG----GGGGCEEEEEEEETTTE--EEEEEETTCCSEEEE----EECSCCTTC
T ss_pred EEEEEEEEeccCCCCcEEEEEE-EcCCCC----CccccceEEEEEEcCCE--EEEEEecCCeEEEEE----EEecCCCCc
Confidence 44677777754 4787878765 333333 222233322 222 333322233555554 334789999
Q ss_pred eEEEEEEEeccccceeeeeccc
Q 000135 1507 WHIVTMTIDADIGEATCYLDGG 1528 (2087)
Q Consensus 1507 ~~~~~~~~~~~~~~~~~~~~~~ 1528 (2087)
||.+++++.- .+.++|+||-
T Consensus 600 w~~L~l~~~G--~~i~~~ldG~ 619 (656)
T 3zr5_A 600 WYTLTLGIKG--YFAFGMLNGT 619 (656)
T ss_dssp EEEEEEEEET--TEEEEEETTE
T ss_pred eEEEEEEEEC--CEEEEEECCE
Confidence 9999988765 5789999984
No 78
>1by8_A Protein (procathepsin K); hydrolase(sulfhydryl proteinase), papain; 2.60A {Homo sapiens} SCOP: d.3.1.1 PDB: 7pck_A
Probab=23.57 E-value=83 Score=36.23 Aligned_cols=41 Identities=24% Similarity=0.445 Sum_probs=34.0
Q ss_pred ccCceeEEEEEEEECCEEEEEEecCCCCCccccCCCCCCCcccchHHhhhhcCCCCCCCCeEEEehh
Q 000135 1926 VQGHAYSILQVREVDGHKLVQIRNPWANEVEWNGPWSDSSPEWTDRMKHKLKHVPQSKDGIFWMSWQ 1992 (2087)
Q Consensus 1926 VsGHAYSVLDVrEVdG~RLVRLRNPWG~~~EWKGdWSD~S~eWTeeLKkkL~~~~~sDDGeFWMSfE 1992 (2087)
..+||=.|++.-+-+|.+.-.+||-||. .| .++|-|||..+
T Consensus 258 ~~~HaV~iVGyg~~~g~~yWivkNSWG~--~W------------------------Ge~GY~~i~r~ 298 (314)
T 1by8_A 258 NLNHAVLAVGYGIQKGNKHWIIKNSWGE--NW------------------------GNKGYILMARN 298 (314)
T ss_dssp CCCEEEEEEEEEEETTEEEEEEECSBTT--TS------------------------TBTTEEEECCS
T ss_pred CCCeEEEEEEEeccCCceEEEEEcCCCC--Cc------------------------CcCCEEEEEcC
Confidence 3589999999987788999999999994 44 35799999875
No 79
>1pci_A Procaricain; zymogen, hydrolase, thiol protease; 3.20A {Carica papaya} SCOP: d.3.1.1
Probab=22.87 E-value=92 Score=36.03 Aligned_cols=40 Identities=18% Similarity=0.454 Sum_probs=33.6
Q ss_pred cCceeEEEEEEEECCEEEEEEecCCCCCccccCCCCCCCcccchHHhhhhcCCCCCCCCeEEEehh
Q 000135 1927 QGHAYSILQVREVDGHKLVQIRNPWANEVEWNGPWSDSSPEWTDRMKHKLKHVPQSKDGIFWMSWQ 1992 (2087)
Q Consensus 1927 sGHAYSVLDVrEVdG~RLVRLRNPWG~~~EWKGdWSD~S~eWTeeLKkkL~~~~~sDDGeFWMSfE 1992 (2087)
.+||=.|++.-+-+|.+.-.+||-||. .| .++|-|||..+
T Consensus 263 ~~HaV~iVGyg~~~g~~yWivkNSWG~--~W------------------------Ge~GY~~i~r~ 302 (322)
T 1pci_A 263 VDGAVTAVGYGKSGGKGYILIKNSWGT--AW------------------------GEKGYIRIKRA 302 (322)
T ss_dssp CCEEEEEEEEEEETTEEEEEEECSBCS--SS------------------------TBTTEEEEECC
T ss_pred CCEEEEEEEEeccCCccEEEEEeCCCC--cc------------------------cCCeEEEEEcC
Confidence 399999999988788899999999994 44 35799999875
No 80
>2o6x_A Procathepsin L1, secreted cathepsin L 1; hydrolase, thiol protease, cysteine protease, zymogen, hydro; 1.40A {Fasciola hepatica}
Probab=22.32 E-value=97 Score=35.63 Aligned_cols=40 Identities=20% Similarity=0.401 Sum_probs=33.9
Q ss_pred cCceeEEEEEEEECCEEEEEEecCCCCCccccCCCCCCCcccchHHhhhhcCCCCCCCCeEEEehh
Q 000135 1927 QGHAYSILQVREVDGHKLVQIRNPWANEVEWNGPWSDSSPEWTDRMKHKLKHVPQSKDGIFWMSWQ 1992 (2087)
Q Consensus 1927 sGHAYSVLDVrEVdG~RLVRLRNPWG~~~EWKGdWSD~S~eWTeeLKkkL~~~~~sDDGeFWMSfE 1992 (2087)
.+||=.|++.-+-+|.+.-.+||-||. .| .++|-|||...
T Consensus 251 ~~HaV~iVGyg~~~g~~yWivkNSWG~--~W------------------------Ge~GY~~i~r~ 290 (310)
T 2o6x_A 251 VNHAVLAVGYGTQGGTDYWIVKNSWGL--SW------------------------GERGYIRMVRN 290 (310)
T ss_dssp CCEEEEEEEEEEETTEEEEEEECSBCT--TS------------------------TBTTEEEEECS
T ss_pred CCEEEEEEEEeccCCceEEEEEeCCCC--cc------------------------CCCcEEEEEcC
Confidence 589999999988788899999999994 44 35799999876
No 81
>3hhi_A Cathepsin B-like cysteine protease; occluding loop, hydrolase, THIO protease; HET: 074; 1.60A {Trypanosoma brucei} SCOP: d.3.1.0 PDB: 4hwy_A* 3mor_A*
Probab=21.95 E-value=93 Score=36.09 Aligned_cols=40 Identities=30% Similarity=0.601 Sum_probs=33.8
Q ss_pred cCceeEEEEEEEECCEEEEEEecCCCCCccccCCCCCCCcccchHHhhhhcCCCCCCCCeEEEehh
Q 000135 1927 QGHAYSILQVREVDGHKLVQIRNPWANEVEWNGPWSDSSPEWTDRMKHKLKHVPQSKDGIFWMSWQ 1992 (2087)
Q Consensus 1927 sGHAYSVLDVrEVdG~RLVRLRNPWG~~~EWKGdWSD~S~eWTeeLKkkL~~~~~sDDGeFWMSfE 1992 (2087)
.+||=.|++.-+-+|.+.-.+||-||. .| .++|-|||.-.
T Consensus 258 ~~HaV~iVGyG~~~g~~YWivkNSWG~--~W------------------------Ge~GY~~i~rg 297 (325)
T 3hhi_A 258 GGHAVRLVGWGTSNGVPYWKIANSWNT--EW------------------------GMDGYFLIRRG 297 (325)
T ss_dssp EEEEEEEEEEEEETTEEEEEEECSBCT--TS------------------------TBTTEEEEECS
T ss_pred CCEEEEEEEEEecCCceEEEEEeCCCC--Cc------------------------ccCCEEEEEcC
Confidence 489999999988788999999999994 44 35799999875
No 82
>3pbh_A Procathepsin B; thiol protease, cysteine protease, proenzyme, papain; 2.50A {Homo sapiens} SCOP: d.3.1.1 PDB: 2pbh_A 1pbh_A 1mir_A
Probab=21.76 E-value=95 Score=35.79 Aligned_cols=41 Identities=27% Similarity=0.554 Sum_probs=33.6
Q ss_pred ccCceeEEEEEEEECCEEEEEEecCCCCCccccCCCCCCCcccchHHhhhhcCCCCCCCCeEEEehh
Q 000135 1926 VQGHAYSILQVREVDGHKLVQIRNPWANEVEWNGPWSDSSPEWTDRMKHKLKHVPQSKDGIFWMSWQ 1992 (2087)
Q Consensus 1926 VsGHAYSVLDVrEVdG~RLVRLRNPWG~~~EWKGdWSD~S~eWTeeLKkkL~~~~~sDDGeFWMSfE 1992 (2087)
..+||=.|++.-+-+|.+.-.+||-||. .| .++|-|||.-.
T Consensus 259 ~~~HaV~iVGyG~~~g~~YWivkNSWG~--~W------------------------Ge~GY~ri~rg 299 (317)
T 3pbh_A 259 MGGHAIRILGWGVENGTPYWLVANSWNT--DW------------------------GDNGFFKILRG 299 (317)
T ss_dssp EEEEEEEEEEEEEETTEEEEEEECSBCT--TS------------------------TBTTEEEEECS
T ss_pred CCCEEEEEEEEEEeCCeeEEEEEcCCCC--Cc------------------------CCCcEEEEEcC
Confidence 3489999999987788999999999994 44 35799999865
No 83
>3qj3_A Cathepsin L-like protein; hydrolase, proteinase, larVal midgut; 1.85A {Tenebrio molitor} SCOP: d.3.1.0
Probab=21.60 E-value=1e+02 Score=35.80 Aligned_cols=42 Identities=24% Similarity=0.500 Sum_probs=34.5
Q ss_pred ccCceeEEEEEEEECCEEEEEEecCCCCCccccCCCCCCCcccchHHhhhhcCCCCCCCCeEEEehhh
Q 000135 1926 VQGHAYSILQVREVDGHKLVQIRNPWANEVEWNGPWSDSSPEWTDRMKHKLKHVPQSKDGIFWMSWQD 1993 (2087)
Q Consensus 1926 VsGHAYSVLDVrEVdG~RLVRLRNPWG~~~EWKGdWSD~S~eWTeeLKkkL~~~~~sDDGeFWMSfED 1993 (2087)
..+||-.|++.-+-+|.+.-.+||-||. .| .++|-|||....
T Consensus 275 ~~~HaV~iVGyg~~~g~~yWivkNSWG~--~W------------------------Ge~GY~~i~r~~ 316 (331)
T 3qj3_A 275 KFTHAVLIVGYGNENGQDYWLVKNSWGD--GW------------------------GLDGYFKIARNA 316 (331)
T ss_dssp CCCEEEEEEEEEEETTEEEEEEECSBCT--TS------------------------TBTTEEEEECSS
T ss_pred cCCEEEEEEEEeccCCceEEEEEcCCCC--Cc------------------------CCCCEEEEEcCC
Confidence 4589999999998788899999999994 44 357999998753
No 84
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=21.18 E-value=1.1e+02 Score=36.38 Aligned_cols=52 Identities=13% Similarity=0.065 Sum_probs=28.7
Q ss_pred hhhhhHHHHHHhhh----hhhhhHHHHHHHHHhhhcccHHHHHHHHHHHHhhHHhhh
Q 000135 1289 EDRRQFEIIQESYI----REKEMEEEILMQRREEEGRGKERRKALLEKEERKWKEIE 1341 (2087)
Q Consensus 1289 ~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1341 (2087)
|++..++.+++.=. -++|+|+|..+++|+++.. +++=+.+.|+.+|-.|||+
T Consensus 404 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 459 (487)
T 3oja_A 404 EEQSPLQLLRAIVKRYEEMYVEQQSVQNNAIRDWDMY-QHKETQLAEENARLKKLNG 459 (487)
T ss_dssp SCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHH
T ss_pred cccCcHHHHHHHHHHHHHHHHHHHHHhhcchhhhhhh-hhHHHHHHHHhhhhhhhhh
Confidence 34455554433322 2355666666666666655 4445566666666666665
Done!