Query 000152
Match_columns 2027
No_of_seqs 362 out of 1503
Neff 3.4
Searched_HMMs 13730
Date Mon Mar 25 20:33:36 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/000152.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/000152hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2es4d1 a.137.15.1 (D:53-332) 44.0 15 0.0011 38.4 6.5 8 326-333 1-8 (280)
2 d1k47a2 d.58.26.4 (A:195-329) 9.9 53 0.0039 31.0 1.9 15 47-61 97-111 (135)
3 d1v5va1 b.44.2.1 (A:313-401) G 5.1 36 0.0026 30.6 -1.9 66 1890-1959 15-84 (89)
4 d1p9ka_ d.66.1.6 (A:) Hypothet 3.3 1.2E+02 0.0088 26.8 0.1 39 1644-1684 30-73 (79)
5 d1kvka2 d.58.26.3 (A:226-394) 3.1 2.2E+02 0.016 27.7 1.8 16 48-63 108-123 (169)
6 d1ujsa_ a.14.1.1 (A:) Actin-bi 2.5 1.5E+02 0.011 27.3 -0.2 9 1280-1288 78-86 (88)
7 d1v1ha1 b.83.1.1 (A:319-392) A 2.3 3.3E+02 0.024 24.3 1.7 22 1808-1829 42-63 (74)
8 d1v9da_ a.207.1.1 (A:) Diaphan 2.1 1.1E+03 0.078 24.5 6.0 35 575-609 297-331 (332)
9 d1qvra2 c.37.1.20 (A:149-535) 1.9 1.8E+03 0.13 23.4 7.9 110 590-699 253-362 (387)
10 d1v9da_ a.207.1.1 (A:) Diaphan 1.9 1.1E+03 0.082 24.3 5.8 34 635-668 298-331 (332)
No 1
>d2es4d1 a.137.15.1 (D:53-332) Lipase chaperone LifO (LipB) {Burkholderia glumae [TaxId: 337]}
Probab=44.02 E-value=15 Score=38.42 Aligned_cols=8 Identities=63% Similarity=1.252 Sum_probs=3.8
Q ss_pred CCCCCCCC
Q 000152 326 MPRPSVLP 333 (2027)
Q Consensus 326 ~~~~~~~p 333 (2027)
||-|..||
T Consensus 1 ~~~~~~~p 8 (280)
T d2es4d1 1 MPLPAALP 8 (280)
T ss_dssp CCCSCSSC
T ss_pred CCCCcCCC
Confidence 34444555
No 2
>d1k47a2 d.58.26.4 (A:195-329) Phosphomevalonate kinase (PMK) {Streptococcus pneumoniae r6 [TaxId: 171101]}
Probab=9.90 E-value=53 Score=31.05 Aligned_cols=15 Identities=33% Similarity=0.432 Sum_probs=10.7
Q ss_pred CCCCCCCceEEeecc
Q 000152 47 PTGGGGGGMLVLSRP 61 (2027)
Q Consensus 47 ~~~~~~ggm~vlsr~ 61 (2027)
.|+||||+|++|..+
T Consensus 97 ~GaGgGG~~i~l~~~ 111 (135)
T d1k47a2 97 SGAGGGDCGIALSFD 111 (135)
T ss_dssp CSSCSSSEEEEEECS
T ss_pred ccCcCCCeEEEEecC
Confidence 445568889998864
No 3
>d1v5va1 b.44.2.1 (A:313-401) Glycine cleavage system T protein, GcvT {Pyrococcus horikoshii [TaxId: 53953]}
Probab=5.14 E-value=36 Score=30.63 Aligned_cols=66 Identities=18% Similarity=0.253 Sum_probs=37.1
Q ss_pred cCCccchhccccCceeeccccCCcccCCCccccccccCCCCCCCCccccccCCCCCCCCccc----cccccccc
Q 000152 1890 SSASPINSLLAGEKIQFGAVTSPTVLPPSTRAVSHGIGPPGPCRSDIQISHNLSTPENDCTI----FFDKEKNT 1959 (2027)
Q Consensus 1890 s~~spinsllagekiqfgavtsptvlpp~~r~v~~g~g~p~s~r~d~~i~~~l~~~~~~~~~----~f~k~~~~ 1959 (2027)
-.-.|| ++++| ++|-|||-+.-|-..+.|.-|+=.+..+..+-++.=.+.+..-.|.| |||.+||.
T Consensus 15 ~~g~~I---~~~g~-~VG~vTSg~~Sp~l~~~Iala~v~~~~~~~g~~v~v~i~g~~~~a~v~~~PfyDp~~~~ 84 (89)
T d1v5va1 15 REGYKV---YANGE-MIGEVTSGTLSPLLNVGIGIAFVKEEYAKPGIEIEVEIRGQRKKAVTVTPPFYDPKKYG 84 (89)
T ss_dssp CTTCEE---EETTE-EEEEEEEEEECTTTCSEEEEEEEEGGGCSTTCEEEEEETTEEEEEEEECSCSSCTTTSS
T ss_pred CCCCEE---EECCE-EEEEEecCcCCCcCCceEEEEEECHHHcCCCCEEEEEECCeEEEEEEECCCCcCCcccE
Confidence 344555 34444 37999999888888877754443333333322222223344444443 88888865
No 4
>d1p9ka_ d.66.1.6 (A:) Hypothetical protein YbcJ {Escherichia coli [TaxId: 562]}
Probab=3.30 E-value=1.2e+02 Score=26.79 Aligned_cols=39 Identities=10% Similarity=0.128 Sum_probs=32.3
Q ss_pred cccC-CccccccccccceeEE----eecCCcccCCCCCCceeeech
Q 000152 1644 RTIR-SEDDVDASLQSGVVRV----FEQPGIEAPSDEDDFIEVRSK 1684 (2027)
Q Consensus 1644 ~~~~-~~~dvda~lqsg~vrv----f~q~gie~p~d~ddfievrsk 1684 (2027)
.|+| |..+++.=+.+|-|+| ...||-.+.. +|-|+|.-|
T Consensus 30 ~gl~~Sr~eAk~lI~~G~V~VNG~~~~~p~~~V~~--~d~I~vdG~ 73 (79)
T d1p9ka_ 30 EGWSESGAQAKIAIAEGQVKVDGAVETRKRCKIVA--GQTVSFAGH 73 (79)
T ss_dssp HTSCSSSSTTSHHHHHHHHEETTBCCCCSSCCCCS--SEEEEETTE
T ss_pred CCCccCHHHHHHHHHhCCcccCCEEeccccccCCC--CCEEEECCE
Confidence 7888 9999999999999997 6788888744 577998654
No 5
>d1kvka2 d.58.26.3 (A:226-394) Mevalonate kinase {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=3.11 E-value=2.2e+02 Score=27.70 Aligned_cols=16 Identities=38% Similarity=0.671 Sum_probs=10.8
Q ss_pred CCCCCCceEEeeccCc
Q 000152 48 TGGGGGGMLVLSRPRS 63 (2027)
Q Consensus 48 ~~~~~ggm~vlsr~r~ 63 (2027)
|+||||-|++|.++-.
T Consensus 108 GAGgGGc~ial~~~~~ 123 (169)
T d1kvka2 108 GAGGGGCGITLLKPGL 123 (169)
T ss_dssp SSCSSSEEEEEECTTC
T ss_pred CCCCCCeEEEEecccc
Confidence 3445777888988743
No 6
>d1ujsa_ a.14.1.1 (A:) Actin-binding LIM protein homologue KIAA0843 {Human (Homo sapiens) [TaxId: 9606]}
Probab=2.50 E-value=1.5e+02 Score=27.33 Aligned_cols=9 Identities=78% Similarity=1.073 Sum_probs=0.0
Q ss_pred EeecccCCC
Q 000152 1280 QFGLFSGPS 1288 (2027)
Q Consensus 1280 qfglfsgps 1288 (2027)
+.|||+|||
T Consensus 78 ~~gLF~~~~ 86 (88)
T d1ujsa_ 78 QARLFSGPS 86 (88)
T ss_dssp HTTCCCCSC
T ss_pred HhCCCCCCC
No 7
>d1v1ha1 b.83.1.1 (A:319-392) Adenovirus {Human adenovirus type 2 [TaxId: 10515]}
Probab=2.31 E-value=3.3e+02 Score=24.27 Aligned_cols=22 Identities=9% Similarity=0.439 Sum_probs=0.0
Q ss_pred CcccceeecCCccccccccccc
Q 000152 1808 NLASGFIFDSENKIMDNVQTSM 1829 (2027)
Q Consensus 1808 ~l~~g~~~d~~~~~~~~~~~~~ 1829 (2027)
+|.+||.||.++.+.-...+.+
T Consensus 42 KlG~GL~fdsngaiv~klgtgl 63 (74)
T d1v1ha1 42 KIGSGIDYNENGAMITKLGAGL 63 (74)
T ss_dssp CBCTTEEECTTSCEEECBCTTC
T ss_pred EecccceecCCCCEeecccCCc
No 8
>d1v9da_ a.207.1.1 (A:) Diaphanous protein homolog 1, dia1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=2.07 E-value=1.1e+03 Score=24.47 Aligned_cols=35 Identities=14% Similarity=0.144 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000152 575 LERVQKMQEQERQRIIEEQERALELARREEEERLR 609 (2027)
Q Consensus 575 LERreKeqEEERRReEEEqeReEEEeRKEEEERER 609 (2027)
...-.+..++..+|++++++.++..+.+++.+++|
T Consensus 297 ~~~~~~a~~e~~~~~~~~~~~~r~~~~~~~~~~~~ 331 (332)
T d1v9da_ 297 RNMFLQAVKENQKRRETEEKMRRAKLAKEKAEKER 331 (332)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC
No 9
>d1qvra2 c.37.1.20 (A:149-535) ClpB, AAA+ modules {Thermus thermophilus [TaxId: 274]}
Probab=1.91 E-value=1.8e+03 Score=23.41 Aligned_cols=110 Identities=15% Similarity=0.143 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000152 590 IEEQERALELARREEEERLRVAREQEEQRRRLEEETREAVWRAEQEQLEATRKAEEQRIAREEERQRIIMEEERRKHAAK 669 (2027)
Q Consensus 590 EEEqeReEEEeRKEEEERERkeREEEERrRReEEErRErEErEEeEReEaERREEEERrReEEErRRreEEEEKRKEEEE 669 (2027)
++....+++....+.|...-.+....+...+..+...+....+++...-.++...+...-.+..+.+...+..+...+..
T Consensus 253 ~el~~ler~I~qLe~E~~aL~ke~d~~s~~rl~~le~el~~lee~~~~L~~~w~~ek~~l~~i~~Lk~~Le~lr~~le~A 332 (387)
T d1qvra2 253 EEIDALERKKLQLEIEREALKKEKDPDSQERLKAIEAEIAKLTEEIAKLRAEWEREREILRKLREAQHRLDEVRREIELA 332 (387)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSSCSSHHHHSCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccchHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhccchhhhh
Q 000152 670 QKLLELEERIAKRQAEAAKSDSNSSDIADE 699 (2027)
Q Consensus 670 eKrkEeEEreKKEEaEaEKrekeAeekaeE 699 (2027)
++....+......-.+....+++..+....
T Consensus 333 ~r~gd~e~AaeL~y~~ip~le~el~~l~~~ 362 (387)
T d1qvra2 333 ERQYDLNRAAELRYGELPKLEAEVEALSEK 362 (387)
T ss_dssp TTTTCHHHHHHHHTTHHHHHHHHHHHHHHH
T ss_pred HHcccHHHHHHHhhchHHHHHHHHHHHHHH
No 10
>d1v9da_ a.207.1.1 (A:) Diaphanous protein homolog 1, dia1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=1.91 E-value=1.1e+03 Score=24.30 Aligned_cols=34 Identities=18% Similarity=0.274 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000152 635 EQLEATRKAEEQRIAREEERQRIIMEEERRKHAA 668 (2027)
Q Consensus 635 EReEaERREEEERrReEEErRRreEEEEKRKEEE 668 (2027)
...++.+++.++++.++++.+|+++++++++++.
T Consensus 298 ~~~~~a~~e~~~~~~~~~~~~r~~~~~~~~~~~~ 331 (332)
T d1v9da_ 298 NMFLQAVKENQKRRETEEKMRRAKLAKEKAEKER 331 (332)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC
Done!