Query 000156
Match_columns 2015
No_of_seqs 429 out of 1551
Neff 7.4
Searched_HMMs 29240
Date Mon Mar 25 20:52:52 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/000156.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/000156hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2of3_A ZYG-9; multifunctional 100.0 1.2E-55 4.2E-60 511.8 28.9 256 1130-1389 3-265 (266)
2 2qk1_A Protein STU2; STU2P, XM 100.0 2.2E-33 7.5E-38 329.9 29.5 231 270-502 2-248 (249)
3 4ffb_C Protein STU2; tubulin f 100.0 8.5E-34 2.9E-38 340.1 22.3 233 1-235 1-252 (278)
4 1u6g_C TIP120 protein, CAND1; 100.0 4E-25 1.4E-29 317.5 85.0 1022 15-1363 10-1188(1230)
5 1u6g_C TIP120 protein, CAND1; 100.0 3.6E-25 1.2E-29 318.0 72.9 968 94-1372 7-1047(1230)
6 2qk2_A LP04448P; mini spindles 100.0 1.1E-28 3.9E-33 289.4 23.9 230 271-503 2-234 (242)
7 4fdd_A Transportin-1; heat rep 99.9 1E-22 3.5E-27 281.7 71.5 772 17-1065 19-848 (852)
8 2bpt_A Importin beta-1 subunit 99.9 5.3E-22 1.8E-26 274.4 65.2 756 17-1043 10-859 (861)
9 4fdd_A Transportin-1; heat rep 99.9 1.1E-21 3.7E-26 271.5 65.2 708 98-1046 18-789 (852)
10 1b3u_A Protein (protein phosph 99.9 1.7E-23 5.7E-28 276.4 41.6 553 288-1039 13-585 (588)
11 2qk1_A Protein STU2; STU2P, XM 99.9 8.4E-25 2.9E-29 256.9 23.6 227 841-1070 4-249 (249)
12 2bpt_A Importin beta-1 subunit 99.9 8.8E-21 3E-25 262.2 64.7 702 18-967 102-859 (861)
13 1qgr_A Protein (importin beta 99.9 1.5E-20 5.2E-25 260.4 66.6 722 61-1042 10-872 (876)
14 2qk2_A LP04448P; mini spindles 99.9 2.9E-23 9.9E-28 243.4 24.0 228 842-1072 4-236 (242)
15 1qgr_A Protein (importin beta 99.9 2.3E-19 8E-24 248.5 67.1 727 17-997 7-866 (876)
16 2of3_A ZYG-9; multifunctional 99.9 5.1E-22 1.7E-26 230.5 24.6 218 592-816 37-264 (266)
17 1b3u_A Protein (protein phosph 99.9 2.1E-20 7E-25 246.8 41.3 529 327-1048 12-555 (588)
18 4ffb_C Protein STU2; tubulin f 99.9 1.5E-22 5.2E-27 242.4 15.1 218 606-827 14-255 (278)
19 1ibr_B P95, importin beta-1 su 99.5 6.7E-11 2.3E-15 150.8 38.0 378 605-1046 5-442 (462)
20 1ibr_B P95, importin beta-1 su 99.4 8.2E-11 2.8E-15 150.0 35.2 380 17-478 7-441 (462)
21 2vgl_B AP-2 complex subunit be 99.3 2.4E-09 8.1E-14 141.7 37.8 479 360-1045 7-497 (591)
22 2vgl_B AP-2 complex subunit be 99.2 1.2E-08 4E-13 135.0 40.2 493 289-962 17-529 (591)
23 2jdq_A Importin alpha-1 subuni 99.2 4.1E-09 1.4E-13 133.9 29.7 391 8-473 12-442 (450)
24 2iw3_A Elongation factor 3A; a 99.2 2.9E-10 9.8E-15 153.5 19.0 196 290-489 19-219 (986)
25 2x19_B Importin-13; nuclear tr 99.1 2.4E-05 8E-10 109.6 68.3 593 296-1052 36-724 (963)
26 2x1g_F Cadmus; transport prote 99.1 9.8E-07 3.4E-11 123.7 52.6 701 103-1042 17-859 (971)
27 1wa5_B Importin alpha subunit; 99.1 8.5E-09 2.9E-13 134.6 29.5 382 16-473 92-509 (530)
28 2jdq_A Importin alpha-1 subuni 99.1 4.2E-09 1.4E-13 133.8 23.5 377 603-1040 22-442 (450)
29 2x19_B Importin-13; nuclear tr 99.1 3.3E-05 1.1E-09 108.0 65.1 354 611-1053 459-859 (963)
30 2x1g_F Cadmus; transport prote 99.1 1.4E-05 4.9E-10 111.9 60.4 603 297-1052 19-732 (971)
31 1w63_A Adapter-related protein 99.0 6.3E-07 2.1E-11 119.0 43.4 462 399-1039 66-575 (618)
32 1wa5_B Importin alpha subunit; 99.0 3.3E-09 1.1E-13 138.4 21.2 378 603-1042 89-511 (530)
33 4b8j_A Importin subunit alpha- 99.0 5.8E-08 2E-12 126.5 29.6 385 16-475 79-497 (528)
34 2z6g_A B-catenin; FULL-length, 99.0 1.1E-06 3.9E-11 119.6 43.0 502 322-1045 112-667 (780)
35 4b8j_A Importin subunit alpha- 99.0 1.2E-08 4E-13 133.1 21.9 379 604-1042 77-497 (528)
36 1w63_A Adapter-related protein 99.0 1.3E-06 4.5E-11 115.9 41.2 343 31-472 11-377 (618)
37 1wa5_C Importin alpha RE-expor 98.9 0.00012 4.2E-09 102.2 58.9 330 613-968 417-794 (960)
38 2z6g_A B-catenin; FULL-length, 98.9 2.6E-06 9E-11 116.1 39.8 518 289-968 119-666 (780)
39 1wa5_C Importin alpha RE-expor 98.8 3.3E-05 1.1E-09 108.0 48.4 538 295-1001 15-669 (960)
40 2iw3_A Elongation factor 3A; a 98.8 3.9E-07 1.4E-11 123.3 25.3 295 94-478 15-328 (986)
41 2z6h_A Catenin beta-1, beta-ca 98.7 5.6E-05 1.9E-09 100.9 44.3 469 363-1045 11-531 (644)
42 2z6h_A Catenin beta-1, beta-ca 98.7 1.1E-05 3.6E-10 107.9 36.2 487 327-968 16-530 (644)
43 3now_A UNC-45 protein, SD10334 98.7 4.8E-05 1.6E-09 101.9 41.3 609 295-1041 18-737 (810)
44 3now_A UNC-45 protein, SD10334 98.6 7.2E-05 2.5E-09 100.2 41.6 670 107-966 22-783 (810)
45 1jdh_A Beta-catenin; beta-cate 98.6 1.5E-05 5E-10 103.4 34.3 482 326-963 18-528 (529)
46 1jdh_A Beta-catenin; beta-cate 98.6 0.00013 4.4E-09 94.5 40.9 387 364-962 15-423 (529)
47 3m1i_C Exportin-1; heat repeat 98.5 0.017 5.8E-07 81.4 64.1 505 295-946 26-642 (1049)
48 3tpo_A Importin subunit alpha- 98.5 8.1E-06 2.8E-10 106.4 27.6 376 603-1039 78-495 (529)
49 3ul1_B Importin subunit alpha- 98.5 5.3E-06 1.8E-10 107.6 25.3 376 603-1039 59-476 (510)
50 2vgl_A Adaptor protein complex 98.5 0.0002 6.7E-09 94.9 40.3 241 733-1045 308-554 (621)
51 3ul1_B Importin subunit alpha- 98.5 1.6E-05 5.6E-10 103.0 29.4 380 288-787 60-477 (510)
52 3tpo_A Importin subunit alpha- 98.5 2.7E-05 9.2E-10 101.5 29.6 377 288-787 79-496 (529)
53 3ltm_A Alpha-REP4; protein eng 98.4 3.6E-06 1.2E-10 95.5 18.4 182 855-1071 21-202 (211)
54 3ltj_A Alpharep-4; protein eng 98.4 4.4E-06 1.5E-10 94.0 18.7 181 854-1069 15-195 (201)
55 3m1i_C Exportin-1; heat repeat 98.4 0.036 1.2E-06 78.0 62.3 534 323-968 192-836 (1049)
56 3ltm_A Alpha-REP4; protein eng 98.4 3.4E-06 1.2E-10 95.6 17.1 179 288-502 22-200 (211)
57 1oyz_A Hypothetical protein YI 98.4 1.9E-05 6.4E-10 93.7 24.2 93 686-788 25-120 (280)
58 1oyz_A Hypothetical protein YI 98.4 9.3E-06 3.2E-10 96.4 21.3 223 719-1039 25-248 (280)
59 3ltj_A Alpharep-4; protein eng 98.4 4.2E-06 1.4E-10 94.1 17.2 149 288-472 17-165 (201)
60 3ibv_A Exportin-T; karyopherin 98.2 0.0087 3E-07 83.1 47.5 581 300-1055 58-781 (980)
61 4db6_A Armadillo repeat protei 98.1 1.9E-05 6.3E-10 89.3 13.8 185 288-473 15-208 (210)
62 2vgl_A Adaptor protein complex 98.1 0.00014 4.8E-09 96.3 24.3 394 604-1039 38-468 (621)
63 2db0_A 253AA long hypothetical 98.0 0.00031 1.1E-08 74.7 19.8 198 292-501 39-242 (253)
64 4db8_A Armadillo-repeat protei 98.0 3.9E-05 1.3E-09 89.2 14.6 183 288-473 15-208 (252)
65 3ibv_A Exportin-T; karyopherin 98.0 0.016 5.3E-07 80.6 42.0 620 56-798 197-934 (980)
66 4hxt_A De novo protein OR329; 97.9 0.00014 4.9E-09 83.9 16.2 184 289-474 6-199 (252)
67 4hxt_A De novo protein OR329; 97.9 0.00036 1.2E-08 80.5 19.0 189 289-479 48-246 (252)
68 4hat_C Exportin-1; heat repeat 97.8 0.053 1.8E-06 75.5 43.7 198 299-501 430-646 (1023)
69 4db6_A Armadillo repeat protei 97.8 6.3E-05 2.2E-09 84.9 11.5 184 855-1040 14-208 (210)
70 4db8_A Armadillo-repeat protei 97.8 4.9E-05 1.7E-09 88.4 10.8 185 289-474 58-251 (252)
71 2db0_A 253AA long hypothetical 97.5 0.0031 1.1E-07 67.2 17.7 173 854-1041 33-210 (253)
72 1xqr_A HSPBP1 protein; armadil 97.5 0.0012 4.1E-08 78.9 16.2 173 300-475 55-239 (296)
73 3b2a_A TON_1937, putative unch 97.5 0.0021 7.1E-08 71.8 16.3 180 857-1040 37-217 (265)
74 3b2a_A TON_1937, putative unch 97.4 0.0034 1.2E-07 70.0 16.6 181 288-474 78-261 (265)
75 3oc3_A Helicase MOT1, MOT1; re 97.0 0.0023 7.9E-08 78.9 11.0 150 288-473 177-327 (800)
76 3l6x_A Catenin delta-1; cateni 96.9 0.47 1.6E-05 61.5 32.7 372 56-482 52-481 (584)
77 3a6p_A Exportin-5; exportin-5, 96.9 3.5 0.00012 58.6 48.3 202 866-1071 499-736 (1204)
78 1xqr_A HSPBP1 protein; armadil 96.8 0.0058 2E-07 73.0 13.3 169 868-1042 55-239 (296)
79 1te4_A Conserved protein MTH18 96.8 0.00015 5.1E-09 75.8 -0.8 119 325-471 12-130 (131)
80 3opb_A SWI5-dependent HO expre 96.7 0.11 3.6E-06 68.8 24.2 363 604-1041 299-728 (778)
81 1vsy_5 Proteasome activator BL 96.6 3.5 0.00012 57.0 39.8 171 300-478 148-369 (997)
82 3l6x_A Catenin delta-1; cateni 96.5 0.28 9.4E-06 63.7 26.3 346 639-1039 50-474 (584)
83 4hat_C Exportin-1; heat repeat 96.5 5.8 0.0002 55.2 57.7 173 895-1069 451-647 (1023)
84 3tjz_B Coatomer subunit gamma; 96.4 0.051 1.7E-06 66.1 17.4 282 675-1036 59-348 (355)
85 3a6p_A Exportin-5; exportin-5, 96.3 7.7 0.00026 55.2 46.0 185 299-489 61-292 (1204)
86 1xm9_A Plakophilin 1; armadill 96.1 0.44 1.5E-05 60.4 24.6 387 57-473 7-448 (457)
87 3tjz_B Coatomer subunit gamma; 96.0 0.088 3E-06 64.0 16.3 187 270-474 16-205 (355)
88 3oc3_A Helicase MOT1, MOT1; re 95.9 0.08 2.7E-06 65.7 15.1 236 718-1036 175-431 (800)
89 4gmo_A Putative uncharacterize 95.9 1.9 6.6E-05 57.4 30.5 89 8-99 31-125 (684)
90 4ady_A RPN2, 26S proteasome re 95.8 0.59 2E-05 63.2 24.3 264 731-1046 450-722 (963)
91 3opb_A SWI5-dependent HO expre 95.7 4.2 0.00014 53.9 31.4 287 730-1041 306-635 (778)
92 1xm9_A Plakophilin 1; armadill 95.5 0.2 7E-06 63.5 18.1 262 719-1041 4-360 (457)
93 1te4_A Conserved protein MTH18 95.5 0.011 3.9E-07 61.3 5.2 85 856-961 45-129 (131)
94 3nmw_A APC variant protein; AR 95.0 0.19 6.6E-06 61.4 15.1 189 289-478 131-338 (354)
95 4ady_A RPN2, 26S proteasome re 94.6 1.8 6.2E-05 58.5 23.3 159 296-478 370-539 (963)
96 3ldz_A STAM-1, signal transduc 94.5 0.25 8.5E-06 51.9 12.2 100 862-970 18-119 (140)
97 1vsy_5 Proteasome activator BL 94.5 2.4 8.1E-05 58.6 25.1 401 54-479 510-971 (997)
98 1x5b_A Signal transducing adap 94.4 0.38 1.3E-05 51.9 13.6 99 862-969 28-129 (163)
99 3gjx_A Exportin-1; transport, 94.2 3.5 0.00012 57.3 25.9 321 698-1067 495-880 (1073)
100 3grl_A General vesicular trans 94.2 1.5 5.2E-05 56.6 20.5 309 679-1040 16-393 (651)
101 1lrv_A LRV, leucine-rich repea 94.1 0.022 7.4E-07 65.9 3.3 113 860-1036 129-241 (244)
102 3nmz_A APC variant protein; pr 94.0 0.5 1.7E-05 59.7 15.7 187 289-476 247-452 (458)
103 3g2s_A C-terminal fragment of 93.9 0.55 1.9E-05 49.8 13.2 110 862-980 24-141 (149)
104 3gs3_A Symplekin, LD45768P; he 93.7 6.9 0.00024 45.2 23.0 127 300-432 30-173 (257)
105 3nmw_A APC variant protein; AR 93.6 0.52 1.8E-05 57.6 14.4 172 301-473 100-291 (354)
106 1mhq_A ADP-ribosylation factor 93.5 0.67 2.3E-05 49.1 13.1 111 862-981 14-132 (148)
107 1juq_A ADP-ribosylation factor 93.5 0.63 2.2E-05 50.5 13.2 110 863-981 27-144 (171)
108 3nmz_A APC variant protein; pr 93.3 0.57 1.9E-05 59.2 14.4 172 301-473 216-407 (458)
109 1elk_A Target of MYB1; superhe 91.8 1.2 4.3E-05 47.6 12.5 99 863-970 30-135 (157)
110 3l9t_A Putative uncharacterize 91.7 1.2 4E-05 50.5 12.5 90 860-965 78-168 (240)
111 3g2s_A C-terminal fragment of 90.4 0.57 2E-05 49.6 8.1 77 125-201 45-130 (149)
112 3o2t_A Symplekin; heat repeat, 90.4 10 0.00035 46.3 20.1 127 300-432 40-183 (386)
113 3l9t_A Putative uncharacterize 89.8 2.1 7.3E-05 48.4 12.4 149 893-1054 69-219 (240)
114 3gs3_A Symplekin, LD45768P; he 89.8 19 0.00064 41.6 20.7 152 857-1039 19-171 (257)
115 3zyq_A Hepatocyte growth facto 89.2 2.8 9.7E-05 47.6 13.2 98 862-968 21-121 (226)
116 1lrv_A LRV, leucine-rich repea 89.2 0.42 1.4E-05 55.1 6.3 65 860-960 177-241 (244)
117 3o2t_A Symplekin; heat repeat, 88.7 12 0.00041 45.7 18.9 141 868-1039 40-181 (386)
118 1juq_A ADP-ribosylation factor 88.1 0.84 2.9E-05 49.6 7.5 77 125-201 47-132 (171)
119 1mhq_A ADP-ribosylation factor 86.7 1.9 6.5E-05 45.6 9.1 77 125-201 35-120 (148)
120 1x5b_A Signal transducing adap 86.6 4.5 0.00015 43.5 12.1 81 399-479 48-130 (163)
121 1dvp_A HRS, hepatocyte growth 86.0 2.8 9.5E-05 47.5 10.6 98 862-968 18-118 (220)
122 3ldz_A STAM-1, signal transduc 85.6 5 0.00017 42.0 11.5 96 294-396 18-115 (140)
123 3tt9_A Plakophilin-2; cell adh 84.2 7.4 0.00025 44.4 13.1 145 327-474 10-180 (233)
124 3rru_A TOM1L1 protein; structu 84.2 3.5 0.00012 43.8 9.6 99 862-969 29-134 (152)
125 3tt9_A Plakophilin-2; cell adh 80.8 6.2 0.00021 45.0 10.7 110 364-475 6-125 (233)
126 3u0r_A Apoptosis inhibitor 5; 79.0 10 0.00034 47.2 12.2 128 324-460 64-192 (507)
127 1upk_A MO25 protein; transfera 76.5 84 0.0029 37.4 18.6 178 290-474 83-283 (341)
128 3u0r_A Apoptosis inhibitor 5; 75.3 16 0.00054 45.5 12.4 147 866-1026 41-191 (507)
129 3gjx_A Exportin-1; transport, 75.0 2.7E+02 0.0094 38.7 60.8 170 298-475 74-276 (1073)
130 4gmo_A Putative uncharacterize 74.2 4.1 0.00014 54.3 7.8 78 403-481 35-112 (684)
131 1elk_A Target of MYB1; superhe 73.3 30 0.001 36.8 12.7 81 398-478 48-134 (157)
132 3zyq_A Hepatocyte growth facto 71.8 32 0.0011 38.9 13.3 82 398-479 40-123 (226)
133 3grl_A General vesicular trans 69.7 71 0.0024 41.5 17.0 170 292-485 28-204 (651)
134 4atg_A TAF6; transcription, TF 68.2 68 0.0023 35.3 14.3 121 868-998 23-158 (196)
135 3rru_A TOM1L1 protein; structu 67.3 9 0.00031 40.6 6.9 77 125-201 50-134 (152)
136 1dvp_A HRS, hepatocyte growth 66.5 24 0.00083 39.7 10.8 62 294-362 18-79 (220)
137 4atg_A TAF6; transcription, TF 65.0 53 0.0018 36.1 12.7 131 605-744 15-159 (196)
138 1vdy_A Hypothetical protein (R 64.1 7.3 0.00025 40.6 5.3 88 305-396 31-131 (140)
139 1vdy_A Hypothetical protein (R 61.8 8.5 0.00029 40.1 5.3 99 862-965 20-130 (140)
140 1w9c_A CRM1 protein, exportin 54.1 97 0.0033 36.8 13.2 157 300-458 44-228 (321)
141 3dad_A FH1/FH2 domain-containi 53.0 2.5E+02 0.0087 33.4 16.4 124 857-983 164-304 (339)
142 4flb_A Regulation of nuclear P 50.8 97 0.0033 31.6 11.3 103 364-473 6-111 (132)
143 1sz9_A PCF11 protein; RNA poly 50.6 65 0.0022 33.7 9.9 73 401-473 41-113 (144)
144 3fga_B Serine/threonine-protei 44.4 2.6E+02 0.0088 34.2 15.1 186 290-486 134-327 (403)
145 3dad_A FH1/FH2 domain-containi 42.7 5E+02 0.017 30.9 16.8 132 371-502 165-316 (339)
146 1upk_A MO25 protein; transfera 40.8 1.2E+02 0.004 36.2 11.0 118 289-408 168-295 (341)
147 3d9j_A RNA-binding protein 16; 40.3 1.1E+02 0.0039 31.8 9.8 114 370-484 9-131 (145)
148 2jak_A Serine/threonine-protei 40.2 1.6E+02 0.0054 35.9 12.3 185 290-485 179-371 (392)
149 1lsh_A Lipovitellin (LV-1N, LV 37.9 1.8E+02 0.0062 40.5 14.3 161 866-1044 408-579 (1056)
150 1w9c_A CRM1 protein, exportin 35.8 4.3E+02 0.015 31.2 14.8 64 414-477 133-199 (321)
151 2npp_B PP2A, B subunit, serine 34.2 2.5E+02 0.0086 34.8 13.1 186 290-486 167-360 (449)
152 3eg5_B Protein diaphanous homo 29.7 2.7E+02 0.0093 33.8 12.4 51 381-432 135-191 (383)
153 1ho8_A Vacuolar ATP synthase s 29.2 1.2E+02 0.0041 37.9 9.0 59 415-475 417-477 (480)
154 1lsh_A Lipovitellin (LV-1N, LV 27.1 4.3E+02 0.015 36.7 15.2 157 297-475 407-577 (1056)
155 4fu3_A Regulation of nuclear P 26.0 2E+02 0.0068 29.3 8.8 66 364-434 5-70 (135)
156 1ho8_A Vacuolar ATP synthase s 25.1 2E+02 0.0069 35.9 9.9 79 886-966 387-477 (480)
157 1c7c_A Protein (deoxyhemoglobi 24.6 8.3E+02 0.028 27.9 15.4 41 437-477 238-279 (283)
158 2km4_A Regulator of TY1 transp 23.2 2.7E+02 0.0092 28.7 9.2 110 365-479 5-122 (142)
159 2rg8_A Programmed cell death p 22.1 2.5E+02 0.0084 29.9 8.8 85 342-433 26-116 (165)
160 2nsz_A Programmed cell death p 21.5 4E+02 0.014 27.0 9.9 86 342-433 23-115 (129)
161 2ion_A PDCD4, programmed cell 20.9 3.9E+02 0.013 28.0 9.9 86 342-433 25-117 (152)
162 1sz9_A PCF11 protein; RNA poly 20.9 5E+02 0.017 26.8 10.6 66 124-191 39-108 (144)
No 1
>2of3_A ZYG-9; multifunctional macromolecule, kinetochore, microtubule, XMAP215, STU2, DIS1, microtubule associated protein, structural protein; 1.90A {Caenorhabditis elegans}
Probab=100.00 E-value=1.2e-55 Score=511.75 Aligned_cols=256 Identities=28% Similarity=0.572 Sum_probs=247.0
Q ss_pred hhcccCCCChHHHhh----hhhccccccCCChhHHHHHHHHHHhhhhHHHHHhhcccCHHHHHHHHHHHHHhcCcChhhH
Q 000156 1130 ALLNVKDSNKEDRER----MVVRRFKFEDPRIEQIQELENDMMKYFREDLHRRLLSTDFKKQVDGLEMLQKALPSIRKDI 1205 (2015)
Q Consensus 1130 ~~~~~~~~~k~~R~~----~~~~k~~f~~p~~e~ve~L~~q~~~~~~~~l~~~lf~~D~k~~~~al~~L~~~l~~~~~~~ 1205 (2015)
|++. .+++|++|++ +++++|+|++||+|++++|++||.++++++++.+|||+||++|++|+++|++.++++++++
T Consensus 3 ~~l~-~~~~K~~R~~~e~~~k~~~w~f~~p~~e~v~~L~~~~~~~~~~~~~~~lfs~d~k~~~~ale~L~~~l~~~~~~~ 81 (266)
T 2of3_A 3 LLLS-DNEDKKQRIKEEKQLKLVKWNFQAPTDEHISQLQTLLGNQAKVSLMSQLFHKDFKQHLAALDSLVRLADTSPRSL 81 (266)
T ss_dssp CSBC-CSSHHHHHHHHHHTTCSCCSCCSSCCHHHHHHHHHHHHTTBCHHHHHHHTCSCHHHHHHHHHHHHHHHHHCHHHH
T ss_pred Ccee-cCccHHHHHHHhhccccccCCCCCCCHHHHHHHHHHHHHhccHHHHHHhcCCCHHHHHHHHHHHHHHhhhChHHH
Confidence 4443 3788999984 5578999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhcCcchHHHHHHHhhHHHHHHHHHhcCCCCCHHHHHhhhhHHHHhhcCChHHHHHHHHHHHHHHhh
Q 000156 1206 IEVLDILLRWFVLQFCKSNTTCLLKVLEFLPELFDTLRDEGYSLTESEAAVFLPCLVEKSGHNIEKVREKMRELTKQIVN 1285 (2015)
Q Consensus 1206 i~~lDlllk~~~lr~~dtN~~vl~k~Le~l~~l~~~l~~~~y~l~~~Ea~~~lP~L~~K~Gd~k~~vr~~v~~il~~i~~ 1285 (2015)
++++|++|||+++||+|+|++|++++||+|..+|..|.+.+|+|+++|+.+|||+|++|+||+||.||+.++.+++.++.
T Consensus 82 ~~~lDll~kw~~lr~~d~N~~v~~~~L~~L~~l~~~l~~~~y~~~~~ea~~~lP~LveKlGd~k~~vR~~~r~il~~l~~ 161 (266)
T 2of3_A 82 LSNSDLLLKWCTLRFFETNPAALIKVLELCKVIVELIRDTETPMSQEEVSAFVPYLLLKTGEAKDNMRTSVRDIVNVLSD 161 (266)
T ss_dssp HHTHHHHHHHHHHHTTSCCHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHGGGCSSHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCccccHHHHHhhhcCCChhhHHHHHHHHHHHHHhhCCCcccccchH---HHHHHhhccCChHHHHHHHHHHHHHHHHh
Q 000156 1286 FYSATKTLPYILEGLRSKNNRTRIECVDLVGFLIDHHGAEISGQLKSL---QIVASLTAERDGEIRKAALNTLATGYKIL 1362 (2015)
Q Consensus 1286 vy~~skvf~~l~~gl~sKN~r~R~ecl~~l~~li~~~g~~~~~~~k~l---~~ia~~i~drd~~VR~AAl~~l~~~y~~~ 1362 (2015)
+||++++|+|+++|++|||+|+|+||+++|+++|++||+. +.|++ +.|+++++|+|++||+||+||++++|.++
T Consensus 162 v~~~~~v~~~l~~g~ksKN~R~R~e~l~~l~~li~~~G~~---~~~~l~~~~~ia~ll~D~d~~VR~aAl~~lve~y~~~ 238 (266)
T 2of3_A 162 VVGPLKMTPMLLDALKSKNARQRSECLLVIEYYITNAGIS---PLKSLSVEKTVAPFVGDKDVNVRNAAINVLVACFKFE 238 (266)
T ss_dssp HHCHHHHHHHHHHGGGCSCHHHHHHHHHHHHHHHHHHCSG---GGGGGCHHHHHGGGGGCSSHHHHHHHHHHHHHHHHHH
T ss_pred HCCHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHhcCCC---ccccccchHHHHHHHcCCCHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999999999999999996 67888 99999999999999999999999999999
Q ss_pred ChHHHHHhhcCCHHHHHhHHHHHHhhh
Q 000156 1363 GEDIWRYVGKLTDAQKSMLDDRFKWKV 1389 (2015)
Q Consensus 1363 G~~v~~~vg~Ls~~~~s~l~er~kr~~ 1389 (2015)
||.||+++|+|++++++||+|||||++
T Consensus 239 Gd~v~k~lg~L~~~~~~~l~er~~r~~ 265 (266)
T 2of3_A 239 GDQMWKAAGRMADKDKSLVEERIKRTG 265 (266)
T ss_dssp TTHHHHHHCCCCHHHHHHHHHHHHHHT
T ss_pred hHHHHHHHhcCCHHHHHHHHHHHhhcc
Confidence 999999999999999999999999974
No 2
>2qk1_A Protein STU2; STU2P, XMAP215, DIS1, TOG, CH-TOG, heat repeat, microtubule plus END, +TIP, protein binding; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.2e-33 Score=329.88 Aligned_cols=231 Identities=24% Similarity=0.435 Sum_probs=219.6
Q ss_pred CCCCCCCCcccccccCcchhhhhhhccCChHHHHHHHHHHHH-Hh-cCCCCC--CCChHHHHHHHHHHh-cccCHHHHHH
Q 000156 270 IDEYELVDPVDILTPLEKSGFWEGVKATKWSERKDAVAELTK-LA-STKRIA--PGDFTEVCRTLKKLI-TDVNIAVAVE 344 (2015)
Q Consensus 270 iD~~dl~~~vdIl~kl~~~~f~~~l~s~kWkeR~eaL~~L~~-l~-~~~ki~--~~~y~~l~~~L~k~l-~D~N~~V~~~ 344 (2015)
.|+||++|||||++|+| ++|++.+.++||++|++|++.|.. ++ +++++. .++|.++++.|++.+ +|+|+.|+..
T Consensus 2 ~~~~d~~~~~~i~~kl~-~~f~~~l~s~~w~eRk~al~~L~~~~~~~~~~i~~~~~~~~~~~~~L~~~l~~D~n~~v~~~ 80 (249)
T 2qk1_A 2 SHMASMLPEETILDKLP-KDFQERITSSKWKDRVEALEEFWDSVLSQTKKLKSTSQNYSNLLGIYGHIIQKDANIQAVAL 80 (249)
T ss_dssp CCSCCCCCCBCCGGGSC-TTHHHHHTCSSHHHHHHHHHHHHHHTGGGCCCBCCTTCCCHHHHHHHHHHHHHCSCHHHHHH
T ss_pred CchHhhcChhhhhhhCC-hhHHHHhhcCCHHHHHHHHHHHHHHHHhcCCccccCcccHHHHHHHHHHHhccCCCHHHHHH
Confidence 47899999999999999 699999999999999999999999 87 678888 689999999999999 6999999999
Q ss_pred HHHHHHHHHHHhh-hcch-hhhHhHHHHHHHHhccCcHHHHHHHHHHHHHHHHhcC------CChHhHHHHHHHHhhcCC
Q 000156 345 AIQAIGNLARGLR-THFS-GSSRFLLPVLLEKLKEKKPTVAESLTQTLQAMHKAGC------LNLVDVVEDVKTSVKNKV 416 (2015)
Q Consensus 345 A~~~l~~La~~L~-~~f~-~~~~~llp~LL~klkdkk~~V~~aa~~aL~al~~~~~------~~l~~il~~l~~~L~~Kn 416 (2015)
|++||+.|+++++ +.|+ +|+..++|.++++++|+|+.|++++..|+++++.+ + .+++.+++.|+.+|+|||
T Consensus 81 A~~al~~la~~l~~~~f~~~y~~~llp~ll~~l~dkk~~V~~aa~~al~~i~~~-~~~~~~~~~l~~ll~~l~~~l~~k~ 159 (249)
T 2qk1_A 81 AAQSVELICDKLKTPGFSKDYVSLVFTPLLDRTKEKKPSVIEAIRKALLTICKY-YDPLASSGRNEDMLKDILEHMKHKT 159 (249)
T ss_dssp HHHHHHHHHHHHCTTTSCHHHHHHHHHHHHHGGGCCCHHHHHHHHHHHHHHHHH-SCTTCTTCTTHHHHHHHHHHTTCSS
T ss_pred HHHHHHHHHHhcccccccHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHH-ccccccCCcHHHHHHHHHHHHcCCC
Confidence 9999999999999 9999 99999999999999999999999999999999998 4 238999999999999999
Q ss_pred hHHHHHHHHHHHHHHHhcCh--hHHHHhh-hhHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhCchHHHHHHHhccHHHH
Q 000156 417 PLVRSLTLNWVTFCIETSSK--AAVLKVH-KDYVPICMECLNDGTPEVRDAAFSVLAAIAKSVGMRPLERSIEKLDDVRR 493 (2015)
Q Consensus 417 p~vR~~~l~~L~~~l~~~~~--~~l~~~l-~~l~p~l~k~L~Ds~~~VR~aA~~al~~l~~~~Ge~~~~~~l~~Ld~~~~ 493 (2015)
|++|.+++.||.+++..++. ..+.+++ +.++|.+.++++|++++||++|.+|++++++++|++.+.+|++.||+.++
T Consensus 160 ~~vk~~al~~l~~~~~~~~~~~~~l~~~l~~~iip~l~~~l~D~~~~VR~aA~~~l~~i~~~vG~~~~~p~l~~Ld~~k~ 239 (249)
T 2qk1_A 160 PQIRMECTQLFNASMKEEKDGYSTLQRYLKDEVVPIVIQIVNDTQPAIRTIGFESFAILIKIFGMNTFVKTLEHLDNLKR 239 (249)
T ss_dssp HHHHHHHHHHHHHHHHHCCSCSHHHHHHHTTTHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHHCSGGGHHHHHHSCHHHH
T ss_pred hHHHHHHHHHHHHHHHHcCCcchhHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHhHHHH
Confidence 99999999999999998875 5677899 99999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhc
Q 000156 494 NKLSEMIAG 502 (2015)
Q Consensus 494 kkI~e~~~~ 502 (2015)
++|++++++
T Consensus 240 ~ki~~~~~~ 248 (249)
T 2qk1_A 240 KKIEETVKT 248 (249)
T ss_dssp HHHHHHHHC
T ss_pred HHHHHHHhc
Confidence 999999875
No 3
>4ffb_C Protein STU2; tubulin fold, heat repeats, cytoskeleton, microtubule, tubul domain, hydrolase; HET: GTP; 2.88A {Saccharomyces cerevisiae}
Probab=100.00 E-value=8.5e-34 Score=340.10 Aligned_cols=233 Identities=25% Similarity=0.390 Sum_probs=183.4
Q ss_pred CChHHhhhhhhcCCChhhhhcCCChHHHHHHHHHHHHHhhccCCC--Cc---hHHHhhhhhhHhhhcCCcHHHHHHHHHH
Q 000156 1 MSEEEKLLKEAKKLPWEDRLLHKNWKVRNEANIDLAALCDSITDP--KD---NRIRELGPLFKKTVADSNAPVQDKALDA 75 (2015)
Q Consensus 1 m~~~~~~~~~~~~lpl~erl~~k~WK~R~~ayeeL~~~~~~~~d~--~~---~~~~~~~~~~~k~v~DsN~~vqe~~lea 75 (2015)
|++|++ .||++|||+|||.||+||.|++||++|.+.|+..... .+ ..|..+.+++++++.|+|+.||++|+++
T Consensus 1 m~~~e~--~d~sklpl~e~l~sk~WK~R~eale~l~~~~~~~~~~~~~~~~~~~~~~~~~~lkk~l~DsN~~v~~~al~~ 78 (278)
T 4ffb_C 1 MSGEEE--VDYTTLPLEERLTYKLWKARLEAYKELNQLFRNSVGDISRDDNIQIYWRDPTLFAQYITDSNVVAQEQAIVA 78 (278)
T ss_dssp ------------CCCHHHHTTCSSHHHHHHHHHHHHHHHHTC----------CCTTSCTHHHHHHTTCSSHHHHHHHHHH
T ss_pred CCCcch--hhhhcCCHHHhcccCcHHHHHHHHHHHHHHHhhCcccccchhHHHHHHHHHHHHHHHhccchHHHHHHHHHH
Confidence 777553 4999999999999999999999999999999865332 12 2366778899999999999999999999
Q ss_pred HHHHHHHhchhh------hhhHHHHHHHHHHhhcC-CChhHHHHHHHHHHHHHhhhh-hhhHHHHHHHHhhcCChhhHHH
Q 000156 76 LIAYLKAADADA------GRYAKEVCDAIAAKCLT-GRPKTVEKAQAVFMLWVELEA-VDVFLDVMEKAIKNKVAKAVVP 147 (2015)
Q Consensus 76 l~~~l~~~~~~~------~~~~~~v~~~LieK~l~-~k~~~k~~a~~~ll~~~E~~~-~~~v~~~L~~~~~~KnpKv~~~ 147 (2015)
+..|++..+... ..++..+++.|++||++ +|+++|+.|.++++.++|... .+.+++.|.++++|||||++.+
T Consensus 79 l~~~~~~~~~~~~~~~~~~~~~~~~l~~lveK~l~~~k~~~~~~a~~~l~~~~~~~~~~~~~~e~l~~~l~~Knpkv~~~ 158 (278)
T 4ffb_C 79 LNSLIDAFASSSLKNAHNITLISTWTPLLVEKGLTSSRATTKTQSMSCILSLCGLDTSITQSVELVIPFFEKKLPKLIAA 158 (278)
T ss_dssp HHHHHTTCC---CCHHHHHHHHHHHHHHHHHHTSSCCCHHHHHHHHHHHHHHHHTSSSSHHHHHHHGGGGGCSCHHHHHH
T ss_pred HHHHHHHhhhhhcccchhHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHhccCHHHHHH
Confidence 999998765432 23467899999999988 799999999999999999865 4778899999999999999999
Q ss_pred HHHHHHHHHHHhCCCCcChhH----HHhhhhhhhcCCChhHHHHHHHHHHHHHHHhCCch--hhHHHhhhChHHHHHHHH
Q 000156 148 AIDVMFQALSEFGAKIIPPKR----ILKMLPELFDHQDQNVRASSKGLTLELCRWIGKDP--VKTILFEKMRDTMKKELE 221 (2015)
Q Consensus 148 ~l~~L~~~l~~fG~~~i~~k~----il~~l~~ll~~~d~~VR~~a~~l~~ely~~lG~~~--l~~~l~~~Lk~~q~keLe 221 (2015)
|+.||.+++.+||.+++++++ +++.++++|+|+|++||++|+.+++++|+|+|+.. +...++++|||+|+++|+
T Consensus 159 ~l~~l~~~l~~fg~~~~~~k~~l~~i~~~l~k~l~d~~~~VR~aA~~l~~~ly~~~G~~~~~~~~~~l~~lkp~~~k~le 238 (278)
T 4ffb_C 159 AANCVYELMAAFGLTNVNVQTFLPELLKHVPQLAGHGDRNVRSQTMNLIVEIYKVTGNNSDLLEEILFKKLKPIQVKDLH 238 (278)
T ss_dssp HHHHHHHHHHHHTTTTCCHHHHHHHHGGGHHHHHTCSSHHHHHHHHHHHHHHHTC-----------CTTSSCHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCcCCchhHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHhCcchhhhhhhhhhcCCHHHHHHHH
Confidence 999999999999999998765 66788999999999999999999999999999742 223445899999999999
Q ss_pred HHHHhcCCCCCCCc
Q 000156 222 VELVNVSGTARPTR 235 (2015)
Q Consensus 222 ~~f~k~~~~~~P~R 235 (2015)
++|+++++.++|++
T Consensus 239 ~~f~k~~~~~~~~~ 252 (278)
T 4ffb_C 239 KLFAKVGDEPSSSK 252 (278)
T ss_dssp HHHSCCCC------
T ss_pred HHHHhcCCCCCCCC
Confidence 99999987655443
No 4
>1u6g_C TIP120 protein, CAND1; cullin repeat, heat repeat, ring finger, ligase; 3.10A {Homo sapiens} SCOP: a.118.1.2 PDB: 4a0c_A
Probab=99.97 E-value=4e-25 Score=317.52 Aligned_cols=1022 Identities=14% Similarity=0.134 Sum_probs=658.8
Q ss_pred ChhhhhcCCChHHHHHHHHHHHHHhhccCCCCc-hHHHhhhhhhHhhhcCCcHHHHHHHHHHHHHHHHHhchhhhhhHHH
Q 000156 15 PWEDRLLHKNWKVRNEANIDLAALCDSITDPKD-NRIRELGPLFKKTVADSNAPVQDKALDALIAYLKAADADAGRYAKE 93 (2015)
Q Consensus 15 pl~erl~~k~WK~R~~ayeeL~~~~~~~~d~~~-~~~~~~~~~~~k~v~DsN~~vqe~~leal~~~l~~~~~~~~~~~~~ 93 (2015)
.|.+++.|.+...|.+|.++|.+.++...-..+ .....+...+.+++.|.|..++..|+.++..+++..+. .+...
T Consensus 10 ~lL~~l~s~d~~~R~~A~~~L~~~l~~~~~~~~~~~~~~il~~Ll~~L~d~~~~vR~~A~~~L~~l~~~~~~---~~~~~ 86 (1230)
T 1u6g_C 10 NLLEKMTSSDKDFRFMATNDLMTELQKDSIKLDDDSERKVVKMILKLLEDKNGEVQNLAVKCLGPLVSKVKE---YQVET 86 (1230)
T ss_dssp HHHHHTTCSSHHHHHHHHHHHHHHTSSSCCSCCTTHHHHHHHHHHHHTTCSSHHHHHHHHHHHHHHHTTSCH---HHHHH
T ss_pred HHHHhcCCCCHhHHHHHHHHHHHHHcccccCCChhHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHhCCH---HHHHH
Confidence 367889999999999999999998864311112 23445566677888999999999999999998876644 45667
Q ss_pred HHHHHHHhhcCCChhHHHHHHHHHHHHHhhhh------------hhhHHHHHHHHhh-cCChhhHHHHHHHHHHHHHHhC
Q 000156 94 VCDAIAAKCLTGRPKTVEKAQAVFMLWVELEA------------VDVFLDVMEKAIK-NKVAKAVVPAIDVMFQALSEFG 160 (2015)
Q Consensus 94 v~~~LieK~l~~k~~~k~~a~~~ll~~~E~~~------------~~~v~~~L~~~~~-~KnpKv~~~~l~~L~~~l~~fG 160 (2015)
+++.|++......+.+|..|..++-.+++.-. ...++..|..++. +.++.++.+++.+|.+++..+|
T Consensus 87 i~~~Ll~~l~d~~~~vR~~a~~~L~~i~~~l~~~~~~~~~~~~~~~~llp~L~~~l~~~~~~~~~~~al~~l~~~~~~~~ 166 (1230)
T 1u6g_C 87 IVDTLCTNMLSDKEQLRDISSIGLKTVIGELPPASSGSALAANVCKKITGRLTSAIAKQEDVSVQLEALDIMADMLSRQG 166 (1230)
T ss_dssp HHHHHHHHTTCSSSHHHHHHHHHHHHHHHHCC-----CCTHHHHHHHHHHHHHHHHSCCSCHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHhcCCcHHHHHHHHHHHHHHHHhCCCcccccchHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHhH
Confidence 88888876434678889998888887775522 3466777777887 6899999999999999999999
Q ss_pred CCCcC-hhHHHhhhhhhhcCCChhHHHHHHHHHHHHHHHhCCchhhHHHhhhChHHHHHHHHHHHHhcCCCCCCCccchh
Q 000156 161 AKIIP-PKRILKMLPELFDHQDQNVRASSKGLTLELCRWIGKDPVKTILFEKMRDTMKKELEVELVNVSGTARPTRKIRA 239 (2015)
Q Consensus 161 ~~~i~-~k~il~~l~~ll~~~d~~VR~~a~~l~~ely~~lG~~~l~~~l~~~Lk~~q~keLe~~f~k~~~~~~P~R~~rs 239 (2015)
....+ ...+++.+.+.|.|.+..||..|...+..+....++..+ ..+-+..+..|.. -.. ... |.
T Consensus 167 ~~l~~~~~~ll~~l~~~L~~~~~~vR~~a~~al~~l~~~~~~~~~-----~~~l~~l~~~L~~----~~~--~~~---r~ 232 (1230)
T 1u6g_C 167 GLLVNFHPSILTCLLPQLTSPRLAVRKRTIIALGHLVMSCGNIVF-----VDLIEHLLSELSK----NDS--MST---TR 232 (1230)
T ss_dssp SSCTTTHHHHHHHHGGGGGCSSHHHHHHHHHHHHHHTTTC----C-----TTHHHHHHHHHHH----TCS--SCS---CT
T ss_pred hHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHhcCHHHH-----HHHHHHHHHHhcc----CCc--hhH---HH
Confidence 86544 467999999999999999999999999999988876422 2221222222211 111 111 11
Q ss_pred hhhHhhhhhccccCCCCCCCCCCCCCCCCCCCCCCCCCcccccccCcchhhhhhhccCChHHHHHHHHHHHHHhcC-CCC
Q 000156 240 EQDKELGQELISEDVGPGPSEESTADVPPEIDEYELVDPVDILTPLEKSGFWEGVKATKWSERKDAVAELTKLAST-KRI 318 (2015)
Q Consensus 240 ~~~~~~~~ea~~~~~~~~~~~~~~~~~~~~iD~~dl~~~vdIl~kl~~~~f~~~l~s~kWkeR~eaL~~L~~l~~~-~ki 318 (2015)
..-.-.. . -....+ ..+.+| .+ + +- +.+...+.+.++..|..++..+..++.. +.-
T Consensus 233 ~a~~~l~-~-l~~~~~------------~~~~~~--l~--~----l~-~~ll~~l~d~~~~vR~~a~~~l~~l~~~~~~~ 289 (1230)
T 1u6g_C 233 TYIQCIA-A-ISRQAG------------HRIGEY--LE--K----II-PLVVKFCNVDDDELREYCIQAFESFVRRCPKE 289 (1230)
T ss_dssp THHHHHH-H-HHHHSS------------GGGTTS--CT--T----HH-HHHHHHHSSCCTTTHHHHHHHHHHHHHCTTCC
T ss_pred HHHHHHH-H-HHHHhH------------HHHHHH--HH--H----HH-HHHHHHhcCCCHHHHHHHHHHHHHHHHHChHH
Confidence 1110000 0 000000 012222 11 1 21 3456666778888999999988887742 211
Q ss_pred CCCChHHHHHHHHHHhc-------------------------------------ccCHHHHHHHHHHHHHHHHHhhhcch
Q 000156 319 APGDFTEVCRTLKKLIT-------------------------------------DVNIAVAVEAIQAIGNLARGLRTHFS 361 (2015)
Q Consensus 319 ~~~~y~~l~~~L~k~l~-------------------------------------D~N~~V~~~A~~~l~~La~~L~~~f~ 361 (2015)
....+..+++.+.+.+. |..-.|+..|+.+++.++...+..|.
T Consensus 290 ~~~~l~~li~~ll~~l~~d~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~vR~~A~~~l~~l~~~~~~~~~ 369 (1230)
T 1u6g_C 290 VYPHVSTIINICLKYLTYDPNYNYDDEDEDENAMDADGGDDDDQGSDDEYSDDDDMSWKVRRAAAKCLDAVVSTRHEMLP 369 (1230)
T ss_dssp CHHHHHHHHHHHTTCCCCC------------------------------------CTTHHHHHHHHHHHHHHTTCCTTHH
T ss_pred HHHhHHHHHHHHHHHhCCCCCCCCcccccccccccccccccchhhcccccccccccCHHHHHHHHHHHHHHHHhchhHHH
Confidence 11123455555544442 12235788999999999997776799
Q ss_pred hhhHhHHHHHHHHhccCcHHHHHHHHHHHHHHHHhcCC-----------------------ChHhHHHHHHHHhhcCChH
Q 000156 362 GSSRFLLPVLLEKLKEKKPTVAESLTQTLQAMHKAGCL-----------------------NLVDVVEDVKTSVKNKVPL 418 (2015)
Q Consensus 362 ~~~~~llp~LL~klkdkk~~V~~aa~~aL~al~~~~~~-----------------------~l~~il~~l~~~L~~Knp~ 418 (2015)
+|...++|.++..++|....||.++..++..++..... .++.+++.+...+++.+|.
T Consensus 370 ~~~~~l~~~l~~~l~d~~~~Vr~~a~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~l~~~l~~~~~~ 449 (1230)
T 1u6g_C 370 EFYKTVSPALISRFKEREENVKADVFHAYLSLLKQTRPVQSWLCDPDAMEQGETPLTMLQSQVPNIVKALHKQMKEKSVK 449 (1230)
T ss_dssp HHHTTTHHHHHSTTSCSSSHHHHHHHHHHHHHHHHHCCC------------CCCHHHHHHHHTTHHHHHHHHHTTCSCHH
T ss_pred HHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHhccccccccCccccccccchHHHHHHHhhHHHHHHHHHhccCCHH
Confidence 99999999999999999999999999999888864100 1234455555568999999
Q ss_pred HHHHHHHHHHHHHHhcChhHHHHhhhhHHHHHHHHhcCCCH--HHHHHHHHHHHHHHHHhCchHHHHHHHhccHHHHHHH
Q 000156 419 VRSLTLNWVTFCIETSSKAAVLKVHKDYVPICMECLNDGTP--EVRDAAFSVLAAIAKSVGMRPLERSIEKLDDVRRNKL 496 (2015)
Q Consensus 419 vR~~~l~~L~~~l~~~~~~~l~~~l~~l~p~l~k~L~Ds~~--~VR~aA~~al~~l~~~~Ge~~~~~~l~~Ld~~~~kkI 496 (2015)
+|..++..|..++...+ ..+..+++.++|.+...|.|.++ +||..+..+++.+....|.+.+.++++.+
T Consensus 450 vr~~~~~~L~~l~~~~~-~~l~~~l~~ll~~l~~~L~d~~~~~~v~~~a~~~l~~~~~~~~~~~~~~~l~~l-------- 520 (1230)
T 1u6g_C 450 TRQCCFNMLTELVNVLP-GALTQHIPVLVPGIIFSLNDKSSSSNLKIDALSCLYVILCNHSPQVFHPHVQAL-------- 520 (1230)
T ss_dssp HHHHHHHHHHHHHHHST-TTTGGGHHHHHHHHHHHTTCSSSCHHHHHHHHHHHHHHHHSSCGGGGHHHHTTT--------
T ss_pred HHHHHHHHHHHHHHHch-hhhHHHHHHHHHHHHHHHcCCCCcchHHHHHHHHHHHHHHhCCHHHHHhHHHHH--------
Confidence 99999999999888754 33556789999999999999985 89999998888877666654344333221
Q ss_pred HHHHhcCCCCCCCCCCCccccCCCCCCCCCCCCcccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcCCC
Q 000156 497 SEMIAGSGGDVATGTSSARVQTSGGSVPSVEASESSFVRKSAASMLSGKRPVSAAPASKKGGPVKPSAKKDGSGKQETSK 576 (2015)
Q Consensus 497 ~e~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~s~~~~~~P~~~~~~~~k~~~~k~~~~~~~~~~~~~s~ 576 (2015)
T Consensus 521 -------------------------------------------------------------------------------- 520 (1230)
T 1u6g_C 521 -------------------------------------------------------------------------------- 520 (1230)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCCCCCCCCCCCHHHHHHHhhccCcHHHHhhhccCCHHHHHHHHHHHHHHHHhccc--------cchHHHHHHHHHhc
Q 000156 577 LTEAPEDVEPSEMSLEEIESRLGSLIPADTVGQLKSAVWKERLEAISSLRQQVEAVQN--------LDQSVEILVRLVCM 648 (2015)
Q Consensus 577 ~~~~~~~~~~~~~s~ee~e~~~~~ll~~~l~~~L~s~~Wk~Rl~a~e~L~~~v~~~~~--------~~~~~~~Lv~~L~~ 648 (2015)
-+.++..+.+.+|+.|.+++..+..+++..+. ..++.+.++..+..
T Consensus 521 --------------------------lp~L~~~l~d~~~~v~~~al~~l~~l~~~~~~~~~~~~~~~~~~~~~ll~~ll~ 574 (1230)
T 1u6g_C 521 --------------------------VPPVVACVGDPFYKITSEALLVTQQLVKVIRPLDQPSSFDATPYIKDLFTCTIK 574 (1230)
T ss_dssp --------------------------HHHHHHHHTCSSHHHHHHHHHHHHHHHHHHCCSSSCCCCCCHHHHHHHHHHHHH
T ss_pred --------------------------HHHHHHHHcccchHHHHHHHHHHHHHHHHhcCcccccccchHHHHHHHHHHHHH
Confidence 13344556777888888888888888766332 22344444443321
Q ss_pred CCCC--cccHHHHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHhhhcchhhhHHHHHHHHHHHhhh---ChhH----HH
Q 000156 649 LPGW--SEKNVQVQQQVIEVINYLAATATKFPKKCVVLCLLGISERVADIKTRAHAMKCLTTFSEAV---GPGF----IF 719 (2015)
Q Consensus 649 ~pg~--~DsN~qV~~~~Le~l~~l~~~~~~~~~~~~~~il~~LveKlgD~K~r~~a~~~L~~l~e~~---~~~~----Vl 719 (2015)
.+ .|.+..|++.++.++..++...+......+..+++.|.+.+.+...|..+..++..++... ..+. ++
T Consensus 575 --~l~~~d~~~~vr~~a~~~lg~L~~~~g~~~~~~~~~~l~~L~~~l~~e~~r~~~~~al~~i~~~~~~~~~~~~~~~i~ 652 (1230)
T 1u6g_C 575 --RLKAADIDQEVKERAISCMGQIICNLGDNLGSDLPNTLQIFLERLKNEITRLTTVKALTLIAGSPLKIDLRPVLGEGV 652 (1230)
T ss_dssp --HHSCSSSCHHHHHHHHHHHHHHHHHTGGGCCTHHHHHHHHHHHHTTSSSHHHHHHHHHHHHTTCSSCCCCHHHHHHHH
T ss_pred --HHhccCCCHHHHHHHHHHHHHHHHHhCchhhhhHHHHHHHHHHHhccchhHHHHHHHHHHHHhCccccchHHHHHHHH
Confidence 13 5778889999999999999987654445678888988888887667777777887776532 2233 34
Q ss_pred HHHHHHhhhCCChhHHHHHHHHHHHHHHHhCCCCCChhhHHHHH---HhcCCCCCchhHHHHHHHHHHHHHHHhChhHHh
Q 000156 720 ERLYKIMKDHKNPKVLSEGILWMVSAVEDFGVSHLKLKDLIDFC---KDTGLQSSAAATRNATIKLLGALHKFVGPDIKG 796 (2015)
Q Consensus 720 ~~L~~~l~~~KnpKv~~~~l~~L~~li~~fG~~~l~~k~li~~l---~~~gL~~sn~~VR~aA~~ll~~Ly~~~G~~l~~ 796 (2015)
+.+...+ ...++.+|..++.++..++..++. .++...+.+.+ ..+ +.+.|..++..+..++..|+...++.+..
T Consensus 653 ~~L~~~l-~~~~~~~r~~a~~al~~l~~~~~~-~~~~~~v~~~l~~ll~l-l~~~D~~~~~~~~~~L~~l~~~~~~~~~~ 729 (1230)
T 1u6g_C 653 PILASFL-RKNQRALKLGTLSALDILIKNYSD-SLTAAMIDAVLDELPPL-ISESDMHVSQMAISFLTTLAKVYPSSLSK 729 (1230)
T ss_dssp HHHHHHT-TSCCHHHHHHHHHHHHHHHHHCCT-TCCHHHHHHHHTTCGGG-SCTTCHHHHHHHHHHHHHHTTSCGGGGGG
T ss_pred HHHHHHH-HhCCHHHHHHHHHHHHHHHhcccc-cCCHHHHHHHHHHHHhh-cCcchHHHHHHHHHHHHHHHHhCchhHHH
Confidence 4444443 567899999999999999998874 34444444444 344 67889999999999999999887766655
Q ss_pred hhhhccHHHHHHHHH-------------HHhcCCCCCCCCCcccccCccccCCCCCCCCCCCCCcccccccchHHHHhcC
Q 000156 797 FLADVKPALLSALDA-------------EYEKNPFEGTVVPKKTVRASESTSSVSSGGSDGLPREDISGKFTPTLVKSLE 863 (2015)
Q Consensus 797 ~L~~lkp~ll~~Le~-------------ef~k~~~~~~p~p~R~~r~~~~~~s~~~~~~d~lprvdIs~~L~~~ll~~l~ 863 (2015)
++..+-|.++..+.. -|..+...++ +. .....+.+.++..+.
T Consensus 730 ~~~~~l~~~~~~l~~~~~~~~~~~~l~~~~~~l~~~~~------------------------~~-~~~~~ll~~l~~~~~ 784 (1230)
T 1u6g_C 730 ISGSILNELIGLVRSPLLQGGALSAMLDFFQALVVTGT------------------------NN-LGYMDLLRMLTGPVY 784 (1230)
T ss_dssp TTTTTHHHHHHHHTCTTCCHHHHHHHHHHHHHHHTTCC------------------------TT-CSHHHHHHHHSTTTT
T ss_pred hHHhHHHHHHHHHcCcccchHHHHHHHHHHHHHHhcCC------------------------CC-CCHHHHHHHHhcccc
Confidence 555555544443321 1111111000 00 001111122222211
Q ss_pred ---C--CChHHHHHHHHHHHHHHHhccccCCCCChhhHHHHHHhcccc--chHHHHHHHHHHHHHHHHHhChhhHHhhhH
Q 000156 864 ---S--PDWKVRLESIEAVNKILEEANKRIQPAGTGELFGGLRGRLYD--SNKNLVMATLITLGAVASAMGPAVEKSSKG 936 (2015)
Q Consensus 864 ---d--~~Wk~R~eale~L~~ll~~a~~~I~~~~~~eL~~~L~~rL~D--sN~~V~~~Al~~l~~La~alg~~f~~~~~~ 936 (2015)
+ ..|..|..+.+.+..++...+. . .++++..|...+.+ .+..++..++.+++.++...+ +.. ...
T Consensus 785 ~~~~~~~~~~~~~~~a~~i~~~~~~~~~----~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~--~~~-~~~ 856 (1230)
T 1u6g_C 785 SQSTALTHKQSYYSIAKCVAALTRACPK----E-GPAVVGQFIQDVKNSRSTDSIRLLALLSLGEVGHHID--LSG-QLE 856 (1230)
T ss_dssp TC----CCHHHHHHHHHHHHHHHHHSCC----C-SHHHHTTTTTTTTTTTCCHHHHHHHHHHHHHHHHHSC--CCS-CTH
T ss_pred CCCCccccchhhHHHHHHHHHHHHhcch----h-hHHHHHHHHHHhCCCCccHHHHHHHHHHHHHhcccCC--Ccc-ccc
Confidence 1 3677788888888887764321 1 13444444444543 345566777788888765432 222 245
Q ss_pred HHHHHHHHhCCCcHHHHHHHHHHHHHHHHhcCchhhHHHHHHHHhcCCCChhHHHHHHHHHHHHhccCCCC---CChhhh
Q 000156 937 VLSDILKCLGDNKKHMRECTLTVLDAWLAAVHLDKMVPYVTTALTDAKLGAEGRKDLFDWLSKQLTGLSGF---PDAAHL 1013 (2015)
Q Consensus 937 llp~ll~~L~D~k~~Vr~aa~~aL~~i~~~~gl~~ll~~l~~~L~~~k~~p~~R~~~l~~L~~~l~~~~~~---~~~~~l 1013 (2015)
+...++..|.|....||.+|..||+.++. -+++.++|.+...+.+. +..|...+.-|.+.+...+.. +....+
T Consensus 857 l~~~~~~~l~~~~~~Vr~aAa~aLg~l~~-~~~~~~lp~ll~~l~~~---~~~~~~~l~al~e~i~~~~~~~~~~~~~~i 932 (1230)
T 1u6g_C 857 LKSVILEAFSSPSEEVKSAASYALGSISV-GNLPEYLPFVLQEITSQ---PKRQYLLLHSLKEIISSASVVGLKPYVENI 932 (1230)
T ss_dssp HHHHHHHGGGCSCHHHHHHHHHHHHHHHH-HTHHHHHHHHHHHHHSC---GGGHHHHHHHHHHHHHSSCSTTTHHHHHHH
T ss_pred HHHHHHHHhCCCCHHHHHHHHHHhHHHhc-cCHHHHHHHHHHHHhcc---chhhHHHHHHHHHHHhcCChhhHHhhHHHH
Confidence 78999999999999999999999999874 35678899999999754 567888888888888754321 122445
Q ss_pred HHHHHhhcCCCChHHHHHHHHHHHHHHHHcChhHHHHHhc-cCChHHHHHHHHHHhhccCCCCCCCCCCCCCCCCCCCCC
Q 000156 1014 LKPASIAMTDKSSDVRKAAEACIVEILRAGGQETIEKNLK-DIQGPALALILERIKLNGASQVSMGPTSKSSSKVPKSAS 1092 (2015)
Q Consensus 1014 l~pl~~~L~D~~~~VR~aA~~~L~~l~~~~G~~~~~~~l~-~L~~~~~~~i~~~l~k~~~~~~~~~~~~~~~~~~~~~~~ 1092 (2015)
...++..+.|.+..+|..+.+|++.+....+.. +.+.+. .|+
T Consensus 933 ~~~L~~~~~~~~~~~r~~~a~~lg~l~~~~~~~-l~p~l~~~l~------------------------------------ 975 (1230)
T 1u6g_C 933 WALLLKHCECAEEGTRNVVAECLGKLTLIDPET-LLPRLKGYLI------------------------------------ 975 (1230)
T ss_dssp HHHHTTCCCCSSTTHHHHHHHHHHHHHHSSGGG-THHHHTTTSS------------------------------------
T ss_pred HHHHHHHhcCcchhhHHHHHHHHhhhhccChHH-HHHHHHHHhc------------------------------------
Confidence 555777888888999999999999988775432 222211 000
Q ss_pred CCCCCCCCCCCccCCCCCCCCCCCCccccchhhhhhhhhcccCCCChHHHhhhhhccccccCCChhHHHHHHHHHHhhhh
Q 000156 1093 NGVSKHGNRAISSRVIPTKGARPESIMSVQDFAVQSQALLNVKDSNKEDRERMVVRRFKFEDPRIEQIQELENDMMKYFR 1172 (2015)
Q Consensus 1093 ~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~R~~~~~~k~~f~~p~~e~ve~L~~q~~~~~~ 1172 (2015)
T Consensus 976 -------------------------------------------------------------------------------- 975 (1230)
T 1u6g_C 976 -------------------------------------------------------------------------------- 975 (1230)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHhhcccCHHHHHHHHHHHHHhcCcChhhHHHHHHHHHHHHHHhhcCcchHHHHHHHhhHHHHHHHHHhcCCCCCHH
Q 000156 1173 EDLHRRLLSTDFKKQVDGLEMLQKALPSIRKDIIEVLDILLRWFVLQFCKSNTTCLLKVLEFLPELFDTLRDEGYSLTES 1252 (2015)
Q Consensus 1173 ~~l~~~lf~~D~k~~~~al~~L~~~l~~~~~~~i~~lDlllk~~~lr~~dtN~~vl~k~Le~l~~l~~~l~~~~y~l~~~ 1252 (2015)
+.+...|..++..+..++...+..+...++-++.-+...+.|++..|-..++..|..+.....+ +-..
T Consensus 976 --------~~~~~~R~~~~~~l~~~~~~~~~~~~~~l~~~~~~ll~~l~d~~~~vr~~a~~~l~~~~~~~~~----~~~~ 1043 (1230)
T 1u6g_C 976 --------SGSSYARSSVVTAVKFTISDHPQPIDPLLKNCIGDFLKTLEDPDLNVRRVALVTFNSAAHNKPS----LIRD 1043 (1230)
T ss_dssp --------SSCHHHHHHHHHHTGGGCCSSCCTHHHHHHHHSTTTHHHHSSSSTHHHHHHHHHHHHHHHHCGG----GTGG
T ss_pred --------CCCHHHHHHHHHHHHHHHccCchhhHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHhcChH----hHHH
Confidence 0000001111111111122111111122322323333346888888888888888876554322 2223
Q ss_pred HHHhhhhHHHHhhcCChH------------------HHHHHHHHHHHHHhhccC----ccccHHHHHhhhcCCChhhHHH
Q 000156 1253 EAAVFLPCLVEKSGHNIE------------------KVREKMRELTKQIVNFYS----ATKTLPYILEGLRSKNNRTRIE 1310 (2015)
Q Consensus 1253 Ea~~~lP~L~~K~Gd~k~------------------~vr~~v~~il~~i~~vy~----~skvf~~l~~gl~sKN~r~R~e 1310 (2015)
....++|.|+..+-...+ .+|+..-+.+-.+...+. ...+|+.++.|++-- -..|.-
T Consensus 1044 ~l~~~lp~l~~~~~~~~~~~~~v~~gp~k~~vd~~l~~rk~a~~~~~~ll~~~~~~i~~~~~~~~~~~gl~d~-~di~~~ 1122 (1230)
T 1u6g_C 1044 LLDTVLPHLYNETKVRKELIREVEMGPFKHTVDDGLDIRKAAFECMYTLLDSCLDRLDIFEFLNHVEDGLKDH-YDIKML 1122 (1230)
T ss_dssp GHHHHHHHHHHTTSCCGGGEEEEEETTEEEEEETHHHHHHHHHHHHHHHHHSSCSSSCHHHHHHHHHHTTSSC-HHHHHH
T ss_pred HHHHHHHHHHHHhcccHHhheeeccCCcccccCCcHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHcccCch-HHHHHH
Confidence 467799999877644333 577776666666655542 346777778888663 678889
Q ss_pred HHHHHHHHHHhhCCCcccc-cchHHHHHHhhc------------cCChHHHHHHHHHHHHHHHHhC
Q 000156 1311 CVDLVGFLIDHHGAEISGQ-LKSLQIVASLTA------------ERDGEIRKAALNTLATGYKILG 1363 (2015)
Q Consensus 1311 cl~~l~~li~~~g~~~~~~-~k~l~~ia~~i~------------drd~~VR~AAl~~l~~~y~~~G 1363 (2015)
|...|..+++.....+... .+.+..+++.++ +|..+...+||.|+..+..+.|
T Consensus 1123 ~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qe~e~~~e~~r~~~r~~~~l~~~~~ 1188 (1230)
T 1u6g_C 1123 TFLMLVRLSTLCPSAVLQRLDRLVEPLRATCTTKVKANSVKQEFEKQDELKRSAMRAVAALLTIPE 1188 (1230)
T ss_dssp HHHHHHHHHHSCCHHHHTTTTTTHHHHHHHHHCCCCTTSCHHHHHHHHHHHHHHHHHHHHTTSSCS
T ss_pred HHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHhhccccchhhhhHHHHHHHHHHHHHHHHHHHhCCC
Confidence 9999999988876655322 222333333222 3344555666666665544443
No 5
>1u6g_C TIP120 protein, CAND1; cullin repeat, heat repeat, ring finger, ligase; 3.10A {Homo sapiens} SCOP: a.118.1.2 PDB: 4a0c_A
Probab=99.97 E-value=3.6e-25 Score=318.02 Aligned_cols=968 Identities=15% Similarity=0.130 Sum_probs=599.4
Q ss_pred HHHHHHHhhcCCChhHHHHHHHHHHHHHhhh-------hhhhHHHHHHHHhhcCChhhHHHHHHHHHHHHHHhCCCCcCh
Q 000156 94 VCDAIAAKCLTGRPKTVEKAQAVFMLWVELE-------AVDVFLDVMEKAIKNKVAKAVVPAIDVMFQALSEFGAKIIPP 166 (2015)
Q Consensus 94 v~~~LieK~l~~k~~~k~~a~~~ll~~~E~~-------~~~~v~~~L~~~~~~KnpKv~~~~l~~L~~~l~~fG~~~i~~ 166 (2015)
-++.|++|..+..+.+|..|.+-+..++... ....++..|+.++.+++|+++.+++.+|..+....+.. .+
T Consensus 7 ~l~~lL~~l~s~d~~~R~~A~~~L~~~l~~~~~~~~~~~~~~il~~Ll~~L~d~~~~vR~~A~~~L~~l~~~~~~~--~~ 84 (1230)
T 1u6g_C 7 HISNLLEKMTSSDKDFRFMATNDLMTELQKDSIKLDDDSERKVVKMILKLLEDKNGEVQNLAVKCLGPLVSKVKEY--QV 84 (1230)
T ss_dssp HHHHHHHHTTCSSHHHHHHHHHHHHHHTSSSCCSCCTTHHHHHHHHHHHHTTCSSHHHHHHHHHHHHHHHTTSCHH--HH
T ss_pred HHHHHHHhcCCCCHhHHHHHHHHHHHHHcccccCCChhHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHhCCHH--HH
Confidence 4677888866678899999977776665332 13477888899999999999999999999887644431 24
Q ss_pred hHHHhhhhhhhcCCChhHHHHHHHHHHHHHHHhCCchhhHHHhhhChHHHHHHHHHHHHhcCCCCCCCccchhhhhHhhh
Q 000156 167 KRILKMLPELFDHQDQNVRASSKGLTLELCRWIGKDPVKTILFEKMRDTMKKELEVELVNVSGTARPTRKIRAEQDKELG 246 (2015)
Q Consensus 167 k~il~~l~~ll~~~d~~VR~~a~~l~~ely~~lG~~~l~~~l~~~Lk~~q~keLe~~f~k~~~~~~P~R~~rs~~~~~~~ 246 (2015)
..+++.+...+.+.+..||..|...+..+...+|+... ..........
T Consensus 85 ~~i~~~Ll~~l~d~~~~vR~~a~~~L~~i~~~l~~~~~----~~~~~~~~~~---------------------------- 132 (1230)
T 1u6g_C 85 ETIVDTLCTNMLSDKEQLRDISSIGLKTVIGELPPASS----GSALAANVCK---------------------------- 132 (1230)
T ss_dssp HHHHHHHHHHTTCSSSHHHHHHHHHHHHHHHHCC---------CCTHHHHHH----------------------------
T ss_pred HHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHhCCCccc----ccchHHHHHH----------------------------
Confidence 56888999999999999999999999988888875200 0000000000
Q ss_pred hhccccCCCCCCCCCCCCCCCCCCCCCCCCCcccccccCcchhhhhhhc-cCChHHHHHHHHHHHHHhc-CCCCCCCChH
Q 000156 247 QELISEDVGPGPSEESTADVPPEIDEYELVDPVDILTPLEKSGFWEGVK-ATKWSERKDAVAELTKLAS-TKRIAPGDFT 324 (2015)
Q Consensus 247 ~ea~~~~~~~~~~~~~~~~~~~~iD~~dl~~~vdIl~kl~~~~f~~~l~-s~kWkeR~eaL~~L~~l~~-~~ki~~~~y~ 324 (2015)
++ + +.+.+.+. +.+|..|..|++.|..++. .++.....+.
T Consensus 133 ---------------------------------~l---l--p~L~~~l~~~~~~~~~~~al~~l~~~~~~~~~~l~~~~~ 174 (1230)
T 1u6g_C 133 ---------------------------------KI---T--GRLTSAIAKQEDVSVQLEALDIMADMLSRQGGLLVNFHP 174 (1230)
T ss_dssp ---------------------------------HH---H--HHHHHHHSCCSCHHHHHHHHHHHHHHHHHTCSSCTTTHH
T ss_pred ---------------------------------HH---H--HHHHHHHcCCCchHHHHHHHHHHHHHHHHhHhHHHHHHH
Confidence 11 1 23444555 4789999999999998874 3333334568
Q ss_pred HHHHHHHHHhcccCHHHHHHHHHHHHHHHHHhhhcchhhhHhHHHHHHHHhccCc-HHHHHHHHHHHHHHHHh-c---CC
Q 000156 325 EVCRTLKKLITDVNIAVAVEAIQAIGNLARGLRTHFSGSSRFLLPVLLEKLKEKK-PTVAESLTQTLQAMHKA-G---CL 399 (2015)
Q Consensus 325 ~l~~~L~k~l~D~N~~V~~~A~~~l~~La~~L~~~f~~~~~~llp~LL~klkdkk-~~V~~aa~~aL~al~~~-~---~~ 399 (2015)
.++..|...+.|.+..|+..|+.+|+.++..++..| ...+++.++..+.+.. ..+|..+..++..++.. + ..
T Consensus 175 ~ll~~l~~~L~~~~~~vR~~a~~al~~l~~~~~~~~---~~~~l~~l~~~L~~~~~~~~r~~a~~~l~~l~~~~~~~~~~ 251 (1230)
T 1u6g_C 175 SILTCLLPQLTSPRLAVRKRTIIALGHLVMSCGNIV---FVDLIEHLLSELSKNDSMSTTRTYIQCIAAISRQAGHRIGE 251 (1230)
T ss_dssp HHHHHHGGGGGCSSHHHHHHHHHHHHHHTTTC-------CTTHHHHHHHHHHHTCSSCSCTTHHHHHHHHHHHSSGGGTT
T ss_pred HHHHHHHHHHcCCcHHHHHHHHHHHHHHHHhcCHHH---HHHHHHHHHHHhccCCchhHHHHHHHHHHHHHHHhHHHHHH
Confidence 899999999999999999999999999998887665 4456777777775543 35677778888888875 1 13
Q ss_pred ChHhHHHHHHHHhhcCChHHHHHHHHHHHHHHHhcChhHHHHhhhhHHHHHHHHhcCCCHHHHHHHHHH-HHHHHHHhCc
Q 000156 400 NLVDVVEDVKTSVKNKVPLVRSLTLNWVTFCIETSSKAAVLKVHKDYVPICMECLNDGTPEVRDAAFSV-LAAIAKSVGM 478 (2015)
Q Consensus 400 ~l~~il~~l~~~L~~Knp~vR~~~l~~L~~~l~~~~~~~l~~~l~~l~p~l~k~L~Ds~~~VR~aA~~a-l~~l~~~~Ge 478 (2015)
.+..+++.+...+++.++.+|..++.++..+...++.. +.++++.++|.+.+.+.+ ++++....... ...+....++
T Consensus 252 ~l~~l~~~ll~~l~d~~~~vR~~a~~~l~~l~~~~~~~-~~~~l~~li~~ll~~l~~-d~~~~~~~d~~~~~~~~~~~~~ 329 (1230)
T 1u6g_C 252 YLEKIIPLVVKFCNVDDDELREYCIQAFESFVRRCPKE-VYPHVSTIINICLKYLTY-DPNYNYDDEDEDENAMDADGGD 329 (1230)
T ss_dssp SCTTHHHHHHHHHSSCCTTTHHHHHHHHHHHHHCTTCC-CHHHHHHHHHHHTTCCCC-C---------------------
T ss_pred HHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHChHH-HHHhHHHHHHHHHHHhCC-CCCCCCcccccccccccccccc
Confidence 45789999999999999999999999999888766543 456788999999988863 22221000000 0000000011
Q ss_pred hHHHHHHHhccHHHHHHHHHHHhcCCCCCCCCCCCccccCCCCCCCCCCCCccccccccccccc---CCCCCCCCCCCCC
Q 000156 479 RPLERSIEKLDDVRRNKLSEMIAGSGGDVATGTSSARVQTSGGSVPSVEASESSFVRKSAASML---SGKRPVSAAPASK 555 (2015)
Q Consensus 479 ~~~~~~l~~Ld~~~~kkI~e~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~s~~---~~~~P~~~~~~~~ 555 (2015)
..... .++ ++.... . .. ..++..+.... ....
T Consensus 330 ~~~~~----~~~-------~~~~~~--d---~~--------------------~~vR~~A~~~l~~l~~~~--------- 364 (1230)
T 1u6g_C 330 DDDQG----SDD-------EYSDDD--D---MS--------------------WKVRRAAAKCLDAVVSTR--------- 364 (1230)
T ss_dssp -------------------------------CT--------------------THHHHHHHHHHHHHHTTC---------
T ss_pred cchhh----ccc-------cccccc--c---cC--------------------HHHHHHHHHHHHHHHHhc---------
Confidence 00000 000 000000 0 00 00000000000 0000
Q ss_pred CCCCCCCCCCCCCCCCCcCCCCCCCCCCCCCCCCCHHHHHHHhhccCcHHHHhhhccCCHHHHHHHHHHHHHHHHhcccc
Q 000156 556 KGGPVKPSAKKDGSGKQETSKLTEAPEDVEPSEMSLEEIESRLGSLIPADTVGQLKSAVWKERLEAISSLRQQVEAVQNL 635 (2015)
Q Consensus 556 k~~~~k~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~ee~e~~~~~ll~~~l~~~L~s~~Wk~Rl~a~e~L~~~v~~~~~~ 635 (2015)
+ +.+...+..+ .+.++..+.+.++..|.++++.+..++......
T Consensus 365 ------------------------------~-----~~~~~~~~~l-~~~l~~~l~d~~~~Vr~~a~~~l~~l~~~~~~~ 408 (1230)
T 1u6g_C 365 ------------------------------H-----EMLPEFYKTV-SPALISRFKEREENVKADVFHAYLSLLKQTRPV 408 (1230)
T ss_dssp ------------------------------C-----TTHHHHHTTT-HHHHHSTTSCSSSHHHHHHHHHHHHHHHHHCCC
T ss_pred ------------------------------h-----hHHHHHHHHH-HHHHHHHcCCCchHHHHHHHHHHHHHHHHhccc
Confidence 0 0011112122 244667778888888989888888877653210
Q ss_pred --------------------chHHHHHHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHhhhcc
Q 000156 636 --------------------DQSVEILVRLVCMLPGWSEKNVQVQQQVIEVINYLAATATKFPKKCVVLCLLGISERVAD 695 (2015)
Q Consensus 636 --------------------~~~~~~Lv~~L~~~pg~~DsN~qV~~~~Le~l~~l~~~~~~~~~~~~~~il~~LveKlgD 695 (2015)
......++..+.. .++|.+..++..++.++..++..++.....++..+++.+++.+.|
T Consensus 409 ~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~l~~--~l~~~~~~vr~~~~~~L~~l~~~~~~~l~~~l~~ll~~l~~~L~d 486 (1230)
T 1u6g_C 409 QSWLCDPDAMEQGETPLTMLQSQVPNIVKALHK--QMKEKSVKTRQCCFNMLTELVNVLPGALTQHIPVLVPGIIFSLND 486 (1230)
T ss_dssp ------------CCCHHHHHHHHTTHHHHHHHH--HTTCSCHHHHHHHHHHHHHHHHHSTTTTGGGHHHHHHHHHHHTTC
T ss_pred cccccCccccccccchHHHHHHHhhHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHchhhhHHHHHHHHHHHHHHHcC
Confidence 0112233333322 367888899999999999999987765556788999999999988
Q ss_pred h----hhhHHHHHHHHHHHhhhChhH-------HHHHHHHHhhhCCChhHHHHHHHHHHHHHHHhCC------CCCC--h
Q 000156 696 I----KTRAHAMKCLTTFSEAVGPGF-------IFERLYKIMKDHKNPKVLSEGILWMVSAVEDFGV------SHLK--L 756 (2015)
Q Consensus 696 ~----K~r~~a~~~L~~l~e~~~~~~-------Vl~~L~~~l~~~KnpKv~~~~l~~L~~li~~fG~------~~l~--~ 756 (2015)
. .++..+...+..+++..+++. +++.++..+ .+++++++.+++..+..+++.+|. ..+. +
T Consensus 487 ~~~~~~v~~~a~~~l~~~~~~~~~~~~~~~l~~llp~L~~~l-~d~~~~v~~~al~~l~~l~~~~~~~~~~~~~~~~~~~ 565 (1230)
T 1u6g_C 487 KSSSSNLKIDALSCLYVILCNHSPQVFHPHVQALVPPVVACV-GDPFYKITSEALLVTQQLVKVIRPLDQPSSFDATPYI 565 (1230)
T ss_dssp SSSCHHHHHHHHHHHHHHHHSSCGGGGHHHHTTTHHHHHHHH-TCSSHHHHHHHHHHHHHHHHHHCCSSSCCCCCCHHHH
T ss_pred CCCcchHHHHHHHHHHHHHHhCCHHHHHhHHHHHHHHHHHHH-cccchHHHHHHHHHHHHHHHHhcCcccccccchHHHH
Confidence 5 467777777777777666552 344455543 678999999999999999998886 1221 3
Q ss_pred hhHHHHHHhcCC--CCCchhHHHHHHHHHHHHHHHhChhHHhhhhhccHHHHHHHHHHHhcCCCCCCCCCcccccCcccc
Q 000156 757 KDLIDFCKDTGL--QSSAAATRNATIKLLGALHKFVGPDIKGFLADVKPALLSALDAEYEKNPFEGTVVPKKTVRASEST 834 (2015)
Q Consensus 757 k~li~~l~~~gL--~~sn~~VR~aA~~ll~~Ly~~~G~~l~~~L~~lkp~ll~~Le~ef~k~~~~~~p~p~R~~r~~~~~ 834 (2015)
..+++.+... + .+.++.||.+|+.+++.|....|+.+..++.. ++..|...+
T Consensus 566 ~~ll~~ll~~-l~~~d~~~~vr~~a~~~lg~L~~~~g~~~~~~~~~----~l~~L~~~l--------------------- 619 (1230)
T 1u6g_C 566 KDLFTCTIKR-LKAADIDQEVKERAISCMGQIICNLGDNLGSDLPN----TLQIFLERL--------------------- 619 (1230)
T ss_dssp HHHHHHHHHH-HSCSSSCHHHHHHHHHHHHHHHHHTGGGCCTHHHH----HHHHHHHHT---------------------
T ss_pred HHHHHHHHHH-HhccCCCHHHHHHHHHHHHHHHHHhCchhhhhHHH----HHHHHHHHh---------------------
Confidence 4567766655 6 77889999999999999999999876544433 222222211
Q ss_pred CCCCCCCCCCCCCcccccccchHHHHhcCCCChHHHHHHHHHHHHHHHhccccCCC-CChhhHHHHHHhccccchHHHHH
Q 000156 835 SSVSSGGSDGLPREDISGKFTPTLVKSLESPDWKVRLESIEAVNKILEEANKRIQP-AGTGELFGGLRGRLYDSNKNLVM 913 (2015)
Q Consensus 835 ~s~~~~~~d~lprvdIs~~L~~~ll~~l~d~~Wk~R~eale~L~~ll~~a~~~I~~-~~~~eL~~~L~~rL~DsN~~V~~ 913 (2015)
.+ ...|..++..+..++... ..+.. ..+.+++..|...+.|.+..++.
T Consensus 620 ----------------------------~~--e~~r~~~~~al~~i~~~~-~~~~~~~~~~~i~~~L~~~l~~~~~~~r~ 668 (1230)
T 1u6g_C 620 ----------------------------KN--EITRLTTVKALTLIAGSP-LKIDLRPVLGEGVPILASFLRKNQRALKL 668 (1230)
T ss_dssp ----------------------------TS--SSHHHHHHHHHHHHTTCS-SCCCCHHHHHHHHHHHHHHTTSCCHHHHH
T ss_pred ----------------------------cc--chhHHHHHHHHHHHHhCc-cccchHHHHHHHHHHHHHHHHhCCHHHHH
Confidence 10 014666777777665311 11111 11478888999999999999999
Q ss_pred HHHHHHHHHHHHhChhhH-HhhhHHHHHHHHHhCCCcHHHHHHHHHHHHHHHHhcC------chhhHHHHHHHHhcCCCC
Q 000156 914 ATLITLGAVASAMGPAVE-KSSKGVLSDILKCLGDNKKHMRECTLTVLDAWLAAVH------LDKMVPYVTTALTDAKLG 986 (2015)
Q Consensus 914 ~Al~~l~~La~alg~~f~-~~~~~llp~ll~~L~D~k~~Vr~aa~~aL~~i~~~~g------l~~ll~~l~~~L~~~k~~ 986 (2015)
.++.+++.++...+..+. .++..++..++..+.+....++..+..+|..+++..+ .+.+++.+...+.+....
T Consensus 669 ~a~~al~~l~~~~~~~~~~~~v~~~l~~ll~ll~~~D~~~~~~~~~~L~~l~~~~~~~~~~~~~~~l~~~~~~l~~~~~~ 748 (1230)
T 1u6g_C 669 GTLSALDILIKNYSDSLTAAMIDAVLDELPPLISESDMHVSQMAISFLTTLAKVYPSSLSKISGSILNELIGLVRSPLLQ 748 (1230)
T ss_dssp HHHHHHHHHHHHCCTTCCHHHHHHHHTTCGGGSCTTCHHHHHHHHHHHHHHTTSCGGGGGGTTTTTHHHHHHHHTCTTCC
T ss_pred HHHHHHHHHHhcccccCCHHHHHHHHHHHHhhcCcchHHHHHHHHHHHHHHHHhCchhHHHhHHhHHHHHHHHHcCcccc
Confidence 999999999999987653 3444444444555678888899999999999987654 356778888888754322
Q ss_pred hhHHHHHHHHHHHHhccCCCCCChhhhHHHHHhhcCC-----CChHHHHHHHHHHHHHHHHcChhHHHHHhccCChHHHH
Q 000156 987 AEGRKDLFDWLSKQLTGLSGFPDAAHLLKPASIAMTD-----KSSDVRKAAEACIVEILRAGGQETIEKNLKDIQGPALA 1061 (2015)
Q Consensus 987 p~~R~~~l~~L~~~l~~~~~~~~~~~ll~pl~~~L~D-----~~~~VR~aA~~~L~~l~~~~G~~~~~~~l~~L~~~~~~ 1061 (2015)
......++..+............+..++..+...+.. .+..+|..+.+|++.+....|...- ..+..+-
T Consensus 749 ~~~~~~l~~~~~~l~~~~~~~~~~~~ll~~l~~~~~~~~~~~~~~~~~~~~a~~i~~~~~~~~~~~~-~~~~~~~----- 822 (1230)
T 1u6g_C 749 GGALSAMLDFFQALVVTGTNNLGYMDLLRMLTGPVYSQSTALTHKQSYYSIAKCVAALTRACPKEGP-AVVGQFI----- 822 (1230)
T ss_dssp HHHHHHHHHHHHHHHTTCCTTCSHHHHHHHHSTTTTTC----CCHHHHHHHHHHHHHHHHHSCCCSH-HHHTTTT-----
T ss_pred hHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHhccccCCCCccccchhhHHHHHHHHHHHHhcchhhH-HHHHHHH-----
Confidence 2233344444443332211122344555555443322 2456788899999998887776421 1111110
Q ss_pred HHHHHHhhccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCCCCCCCCCccccchhhhhhhhhcccCCCChHH
Q 000156 1062 LILERIKLNGASQVSMGPTSKSSSKVPKSASNGVSKHGNRAISSRVIPTKGARPESIMSVQDFAVQSQALLNVKDSNKED 1141 (2015)
Q Consensus 1062 ~i~~~l~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~ 1141 (2015)
...+. + .. ......-.+..+ ++-.
T Consensus 823 ------~~~~~------------------------------------~--~~---------~~~~~~~~l~~l---~~~g 846 (1230)
T 1u6g_C 823 ------QDVKN------------------------------------S--RS---------TDSIRLLALLSL---GEVG 846 (1230)
T ss_dssp ------TTTTT------------------------------------T--TC---------CHHHHHHHHHHH---HHHH
T ss_pred ------HHhCC------------------------------------C--Cc---------cHHHHHHHHHHH---HHhc
Confidence 00000 0 00 000000000000 0000
Q ss_pred HhhhhhccccccCCChhHHHHHHHHHHhhhhHHHHHhhcccCHHHHHHHHHHHHHhcCcChhhHHHHHHHHHHHHHHhhc
Q 000156 1142 RERMVVRRFKFEDPRIEQIQELENDMMKYFREDLHRRLLSTDFKKQVDGLEMLQKALPSIRKDIIEVLDILLRWFVLQFC 1221 (2015)
Q Consensus 1142 R~~~~~~k~~f~~p~~e~ve~L~~q~~~~~~~~l~~~lf~~D~k~~~~al~~L~~~l~~~~~~~i~~lDlllk~~~lr~~ 1221 (2015)
+ ...|.. -++ +. +.++..+.+.+-.-|.+|...|-.... .+++.++.++...+.
T Consensus 847 ~----~~~~~~---~~~----l~--------~~~~~~l~~~~~~Vr~aAa~aLg~l~~-------~~~~~~lp~ll~~l~ 900 (1230)
T 1u6g_C 847 H----HIDLSG---QLE----LK--------SVILEAFSSPSEEVKSAASYALGSISV-------GNLPEYLPFVLQEIT 900 (1230)
T ss_dssp H----HSCCCS---CTH----HH--------HHHHHGGGCSCHHHHHHHHHHHHHHHH-------HTHHHHHHHHHHHHH
T ss_pred c----cCCCcc---ccc----HH--------HHHHHHhCCCCHHHHHHHHHHhHHHhc-------cCHHHHHHHHHHHHh
Confidence 0 001111 111 11 234445555666667777666665542 234444444444443
Q ss_pred CcchHHHHHHHhhHHHHHHHHHhcCCCCCHHHHHhhhhHHHHhhcCChHHHHHHHHHHHHHHhhccCccccHHHHHhhhc
Q 000156 1222 KSNTTCLLKVLEFLPELFDTLRDEGYSLTESEAAVFLPCLVEKSGHNIEKVREKMRELTKQIVNFYSATKTLPYILEGLR 1301 (2015)
Q Consensus 1222 dtN~~vl~k~Le~l~~l~~~l~~~~y~l~~~Ea~~~lP~L~~K~Gd~k~~vr~~v~~il~~i~~vy~~skvf~~l~~gl~ 1301 (2015)
+. +..-...|..|.+++... ..-.+ ...+..++|.|+..+++.-+.+|..+-+++..+..+.| ..++|.|.+.++
T Consensus 901 ~~-~~~~~~~l~al~e~i~~~--~~~~~-~~~~~~i~~~L~~~~~~~~~~~r~~~a~~lg~l~~~~~-~~l~p~l~~~l~ 975 (1230)
T 1u6g_C 901 SQ-PKRQYLLLHSLKEIISSA--SVVGL-KPYVENIWALLLKHCECAEEGTRNVVAECLGKLTLIDP-ETLLPRLKGYLI 975 (1230)
T ss_dssp SC-GGGHHHHHHHHHHHHHSS--CSTTT-HHHHHHHHHHHTTCCCCSSTTHHHHHHHHHHHHHHSSG-GGTHHHHTTTSS
T ss_pred cc-chhhHHHHHHHHHHHhcC--ChhhH-HhhHHHHHHHHHHHhcCcchhhHHHHHHHHhhhhccCh-HHHHHHHHHHhc
Confidence 32 333334556666665432 12233 34478899999999998888899999999999988865 679999999999
Q ss_pred CCChhhHHHHHHHHHHHHHhhCCCcccccchH-HHHHHhhccCChHHHHHHHHHHHHHHHHhChHHHHHhhc
Q 000156 1302 SKNNRTRIECVDLVGFLIDHHGAEISGQLKSL-QIVASLTAERDGEIRKAALNTLATGYKILGEDIWRYVGK 1372 (2015)
Q Consensus 1302 sKN~r~R~ecl~~l~~li~~~g~~~~~~~k~l-~~ia~~i~drd~~VR~AAl~~l~~~y~~~G~~v~~~vg~ 1372 (2015)
+.|+.+|.-|+..+.+++...+.......+.+ +.+-.+++|.|..||.+|+.+|..+....|+.+..+++.
T Consensus 976 ~~~~~~R~~~~~~l~~~~~~~~~~~~~~l~~~~~~ll~~l~d~~~~vr~~a~~~l~~~~~~~~~~~~~~l~~ 1047 (1230)
T 1u6g_C 976 SGSSYARSSVVTAVKFTISDHPQPIDPLLKNCIGDFLKTLEDPDLNVRRVALVTFNSAAHNKPSLIRDLLDT 1047 (1230)
T ss_dssp SSCHHHHHHHHHHTGGGCCSSCCTHHHHHHHHSTTTHHHHSSSSTHHHHHHHHHHHHHHHHCGGGTGGGHHH
T ss_pred CCCHHHHHHHHHHHHHHHccCchhhHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHhcChHhHHHHHHH
Confidence 99999998888877777654443221112233 555568899999999999999999887776665555443
No 6
>2qk2_A LP04448P; mini spindles, MSPS, XMAP215, DIS1, STU2, heat repeat, micro plus END, +TIP, protein binding; 2.10A {Drosophila melanogaster}
Probab=99.96 E-value=1.1e-28 Score=289.35 Aligned_cols=230 Identities=29% Similarity=0.469 Sum_probs=217.4
Q ss_pred CCCCCCCcccccccCcchhhhhhhccCChHHHHHHHHHHHHHhc-CCCCCCCChHHHHHHHHHHhc-ccCHHHHHHHHHH
Q 000156 271 DEYELVDPVDILTPLEKSGFWEGVKATKWSERKDAVAELTKLAS-TKRIAPGDFTEVCRTLKKLIT-DVNIAVAVEAIQA 348 (2015)
Q Consensus 271 D~~dl~~~vdIl~kl~~~~f~~~l~s~kWkeR~eaL~~L~~l~~-~~ki~~~~y~~l~~~L~k~l~-D~N~~V~~~A~~~ 348 (2015)
||||+.+++||+++++ ++|++.+.+++|++|++|+..|..++. ++++...+|.+++..|.+++. |.|..|+..|+.|
T Consensus 2 d~~d~~~~~di~~~l~-~~l~~~l~s~~w~~R~~a~~~L~~l~~~~~~~~~~~~~~i~~~L~~~l~kd~~~~V~~~a~~~ 80 (242)
T 2qk2_A 2 SHMDLLDPVDILSKMP-KDFYDKLEEKKWTLRKESLEVLEKLLTDHPKLENGEYGALVSALKKVITKDSNVVLVAMAGKC 80 (242)
T ss_dssp HHHHTTSCBCCGGGSC-TTHHHHHTCSSHHHHHHHHHHHHHHHHHCSSBCCCCCHHHHHHHHHHHHHCSCHHHHHHHHHH
T ss_pred CHHHhCCcccccccCC-HHHHhhhccCCHHHHHHHHHHHHHHHccCCCCCCCCHHHHHHHHHHHhccCCCHHHHHHHHHH
Confidence 7899999999999999 689999999999999999999999886 478877889999999999995 9999999999999
Q ss_pred HHHHHHHhhhcchhhhHhHHHHHHHHhccCcHHHHHHHHHHHHHHHHhcCCChHhHHHHHHHHhhcCChHHHHHHHHHHH
Q 000156 349 IGNLARGLRTHFSGSSRFLLPVLLEKLKEKKPTVAESLTQTLQAMHKAGCLNLVDVVEDVKTSVKNKVPLVRSLTLNWVT 428 (2015)
Q Consensus 349 l~~La~~L~~~f~~~~~~llp~LL~klkdkk~~V~~aa~~aL~al~~~~~~~l~~il~~l~~~L~~Knp~vR~~~l~~L~ 428 (2015)
++.|+.++++.|.+|+..++|.|+++++|+++.||+++..||.+++.. .+++.++|.|..+++++||++|.+++.||.
T Consensus 81 l~~la~~l~~~~~~~~~~ilp~ll~~l~d~~~~vr~~a~~aL~~~~~~--~~~~~ll~~l~~~l~~~~~~vr~~~l~~l~ 158 (242)
T 2qk2_A 81 LALLAKGLAKRFSNYASACVPSLLEKFKEKKPNVVTALREAIDAIYAS--TSLEAQQESIVESLSNKNPSVKSETALFIA 158 (242)
T ss_dssp HHHHHHHHGGGGHHHHHHHHHHHHHGGGCCCHHHHHHHHHHHHHHHTT--SCHHHHHHHHHHHTTCSCHHHHHHHHHHHH
T ss_pred HHHHHHHHhhhHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHc--CCHHHHHHHHHHHHcCCChHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999985 689999999999999999999999999999
Q ss_pred HHHHhcChh-HHHHhhhhHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhCchHHHHHHHhccHHHHHHHHHHHhcC
Q 000156 429 FCIETSSKA-AVLKVHKDYVPICMECLNDGTPEVRDAAFSVLAAIAKSVGMRPLERSIEKLDDVRRNKLSEMIAGS 503 (2015)
Q Consensus 429 ~~l~~~~~~-~l~~~l~~l~p~l~k~L~Ds~~~VR~aA~~al~~l~~~~Ge~~~~~~l~~Ld~~~~kkI~e~~~~~ 503 (2015)
.++..+.+. .+..+++.++|.+.++++|++++||++|.+|++.++..+|++.+.++++.|++.++++|++++++.
T Consensus 159 ~~l~~~~~~~~~~~~l~~l~p~l~~~l~D~~~~VR~~A~~~l~~l~~~vg~~~~~~~l~~L~~~~~~~i~~~~~~a 234 (242)
T 2qk2_A 159 RALTRTQPTALNKKLLKLLTTSLVKTLNEPDPTVRDSSAEALGTLIKLMGDKAVTPLLADVDPLKMAKIKECQEKA 234 (242)
T ss_dssp HHHTTCCGGGCCHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHHHHHHHCHHHHGGGGTTSCHHHHHHHHHHHHHC
T ss_pred HHHHHcCCCCccHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHcCHHHHHHHHHhcCHHHHHHHHHHHHHH
Confidence 999887644 345778999999999999999999999999999999999998899999999999999999999875
No 7
>4fdd_A Transportin-1; heat repeats, karyopherin, nuclear import, protein transport importin, transportin, transport protein; 2.30A {Homo sapiens} PDB: 2ot8_A 2h4m_A 2z5k_A 2z5j_A 2qmr_A 2z5m_A 2z5n_A 2z5o_A 1qbk_B*
Probab=99.95 E-value=1e-22 Score=281.66 Aligned_cols=772 Identities=12% Similarity=0.134 Sum_probs=537.8
Q ss_pred hhhhcCCChHHHHHHHHHHHHHhhccCCCCchHHHhhhhhhHhhhcCCcHHHHHHHHHHHHHHHHHhchhhhh-hHHHHH
Q 000156 17 EDRLLHKNWKVRNEANIDLAALCDSITDPKDNRIRELGPLFKKTVADSNAPVQDKALDALIAYLKAADADAGR-YAKEVC 95 (2015)
Q Consensus 17 ~erl~~k~WK~R~~ayeeL~~~~~~~~d~~~~~~~~~~~~~~k~v~DsN~~vqe~~leal~~~l~~~~~~~~~-~~~~v~ 95 (2015)
.+...+.+-..|.+|.+.|.+ +. ..|.|..|...+..-..+.+..+...|.-.|-.++++.-..... ....|-
T Consensus 19 l~~~~s~d~~~r~~Ae~~L~~-~~-----~~p~~~~~l~~il~~~~~~~~~vR~~a~~~Lkn~i~~~w~~~~~~~~~~ik 92 (852)
T 4fdd_A 19 LKESQSPDTTIQRTVQQKLEQ-LN-----QYPDFNNYLIFVLTKLKSEDEPTRSLSGLILKNNVKAHFQNFPNGVTDFIK 92 (852)
T ss_dssp HHHHTCSCHHHHHHHHHHHHH-HT-----TSHHHHHHHHHHHHTCTTSCHHHHHHHHHHHHHHTTTSGGGCCHHHHHHHH
T ss_pred HHHHhCcCHHHHHHHHHHHHH-HH-----hCCCHHHHHHHHHhccCCCChHHHHHHHHHHHHHHHHccCCCCHHHHHHHH
Confidence 344567788899999888874 32 34666555443333336778888888877777666542111111 122344
Q ss_pred HHHHHhhcC-CChhHHHHHHHHHHHHHhhhhh---hhHHHHHHHHhhcCChhhHHHHHHHHHHHHHHhCCCC------cC
Q 000156 96 DAIAAKCLT-GRPKTVEKAQAVFMLWVELEAV---DVFLDVMEKAIKNKVAKAVVPAIDVMFQALSEFGAKI------IP 165 (2015)
Q Consensus 96 ~~LieK~l~-~k~~~k~~a~~~ll~~~E~~~~---~~v~~~L~~~~~~KnpKv~~~~l~~L~~~l~~fG~~~------i~ 165 (2015)
..|+.- ++ ..+.+|..+.+++-.++..+.+ ..+++.|...+.+.++.++.+++.+|..+++.++... -.
T Consensus 93 ~~ll~~-l~~~~~~vr~~~a~~i~~ia~~~~~~~wp~ll~~L~~~l~~~~~~~r~~al~~L~~i~~~~~~~~~~~~~~~~ 171 (852)
T 4fdd_A 93 SECLNN-IGDSSPLIRATVGILITTIASKGELQNWPDLLPKLCSLLDSEDYNTCEGAFGALQKICEDSAEILDSDVLDRP 171 (852)
T ss_dssp HHHHTT-TTCSSHHHHHHHHHHHHHHHHHTTTTTCTTHHHHHHHHHSCSSHHHHHHHHHHHHHHHHHHTTHHHHCSSSSC
T ss_pred HHHHHH-HcCCCHHHHHHHHHHHHHHHHhcCccccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhHHHhchhhhcch
Confidence 445543 55 5678899998888888766532 3578888888999999999999999999999887631 12
Q ss_pred hhHHHhhhhhhhcCCChhHHHHHHHHHHHHHHHhCCchhhHHHhhhChHHHHHHHHHHHHhcCCCCCCCccchhhhhHhh
Q 000156 166 PKRILKMLPELFDHQDQNVRASSKGLTLELCRWIGKDPVKTILFEKMRDTMKKELEVELVNVSGTARPTRKIRAEQDKEL 245 (2015)
Q Consensus 166 ~k~il~~l~~ll~~~d~~VR~~a~~l~~ely~~lG~~~l~~~l~~~Lk~~q~keLe~~f~k~~~~~~P~R~~rs~~~~~~ 245 (2015)
+..+++.+..+|.+.+..||..|...+..+....+. .+...
T Consensus 172 ~~~il~~l~~~l~~~~~~vR~~A~~aL~~~~~~~~~-----~~~~~---------------------------------- 212 (852)
T 4fdd_A 172 LNIMIPKFLQFFKHSSPKIRSHAVACVNQFIISRTQ-----ALMLH---------------------------------- 212 (852)
T ss_dssp HHHHHHHHTTTTTCSSHHHHHHHHHHHHTTTTTTCH-----HHHTS----------------------------------
T ss_pred HHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHhcccH-----HHHHH----------------------------------
Confidence 567899999999999999999988776433322110 00000
Q ss_pred hhhccccCCCCCCCCCCCCCCCCCCCCCCCCCcccccccCcchhhhhhhccCChHHHHHHHHHHHHHhc-CCCCCCCChH
Q 000156 246 GQELISEDVGPGPSEESTADVPPEIDEYELVDPVDILTPLEKSGFWEGVKATKWSERKDAVAELTKLAS-TKRIAPGDFT 324 (2015)
Q Consensus 246 ~~ea~~~~~~~~~~~~~~~~~~~~iD~~dl~~~vdIl~kl~~~~f~~~l~s~kWkeR~eaL~~L~~l~~-~~ki~~~~y~ 324 (2015)
++ ++ + +.+...+.+.++..|+.+++.|..++. .++.....+.
T Consensus 213 ------------------------~~--------~~---l--~~l~~~~~d~~~~vr~~a~~~L~~l~~~~~~~~~~~l~ 255 (852)
T 4fdd_A 213 ------------------------ID--------SF---I--ENLFALAGDEEPEVRKNVCRALVMLLEVRMDRLLPHMH 255 (852)
T ss_dssp ------------------------HH--------HH---H--HHHHHHHTCCCHHHHHHHHHHHHHHHHHCHHHHGGGHH
T ss_pred ------------------------HH--------HH---H--HHHHHHcCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHH
Confidence 00 00 0 123344566778889999999998874 4443334456
Q ss_pred HHHHHHHHHhcccCHHHHHHHHHHHHHHHHH--hhhcchhhhHhHHHHHHHHh-----------cc-----------CcH
Q 000156 325 EVCRTLKKLITDVNIAVAVEAIQAIGNLARG--LRTHFSGSSRFLLPVLLEKL-----------KE-----------KKP 380 (2015)
Q Consensus 325 ~l~~~L~k~l~D~N~~V~~~A~~~l~~La~~--L~~~f~~~~~~llp~LL~kl-----------kd-----------kk~ 380 (2015)
.++..+.+.+.|....|+..|+.++..+++. .++.+.+|...++|.++..+ .| ..-
T Consensus 256 ~l~~~l~~~~~~~~~~vr~~a~e~l~~l~~~~~~~~~~~~~~~~l~p~ll~~l~~~e~d~~~~~~d~~ed~~~dd~~~~~ 335 (852)
T 4fdd_A 256 NIVEYMLQRTQDQDENVALEACEFWLTLAEQPICKDVLVRHLPKLIPVLVNGMKYSDIDIILLKGDVEGGSGGDDTISDW 335 (852)
T ss_dssp HHHHHHHHHHTCSSHHHHHHHHHHHHHHTTSTTHHHHHTTTHHHHHHHHHHHTSCCHHHHHHHHC------------CCC
T ss_pred HHHHHHHHHccCCcHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHcCCcHhHHHHhcCCcccccccccccccc
Confidence 8889999999999999999999999998863 44557789999999999998 34 344
Q ss_pred HHHHHHHHHHHHHHHh-cCCChHhHHHHHHHHhhcCChHHHHHHHHHHHHHHHhcChhHHHHhhhhHHHHHHHHhcCCCH
Q 000156 381 TVAESLTQTLQAMHKA-GCLNLVDVVEDVKTSVKNKVPLVRSLTLNWVTFCIETSSKAAVLKVHKDYVPICMECLNDGTP 459 (2015)
Q Consensus 381 ~V~~aa~~aL~al~~~-~~~~l~~il~~l~~~L~~Knp~vR~~~l~~L~~~l~~~~~~~l~~~l~~l~p~l~k~L~Ds~~ 459 (2015)
.||.++..+|+.+... +..-+..+++.+...+++.+|.+|.+++..|..+.+.++. .+..+++.++|.+..++.|.++
T Consensus 336 ~vr~~a~~~L~~la~~~~~~~~~~l~~~l~~~l~~~~~~~R~aa~~alg~i~~~~~~-~~~~~l~~~l~~l~~~l~d~~~ 414 (852)
T 4fdd_A 336 NLRKCSAAALDVLANVYRDELLPHILPLLKELLFHHEWVVKESGILVLGAIAEGCMQ-GMIPYLPELIPHLIQCLSDKKA 414 (852)
T ss_dssp CHHHHHHHHHHHHHHHHGGGGHHHHHHHHHHHHTCSSHHHHHHHHHHHHHTTTTTHH-HHGGGHHHHHHHHHHHTTCSSH
T ss_pred hHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHhcchH-HHHHHHHHHHHHHHHHcCCCCH
Confidence 6899999999999876 2222455677777788899999999999999987766543 4557789999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhCchHHHHHHHhccHHHHHHHHHHHhcCCCCCCCCCCCccccCCCCCCCCCCCCcccccccccc
Q 000156 460 EVRDAAFSVLAAIAKSVGMRPLERSIEKLDDVRRNKLSEMIAGSGGDVATGTSSARVQTSGGSVPSVEASESSFVRKSAA 539 (2015)
Q Consensus 460 ~VR~aA~~al~~l~~~~Ge~~~~~~l~~Ld~~~~kkI~e~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~ 539 (2015)
.||.+|..+++.+...++......
T Consensus 415 ~Vr~~a~~~l~~l~~~~~~~~~~~-------------------------------------------------------- 438 (852)
T 4fdd_A 415 LVRSITCWTLSRYAHWVVSQPPDT-------------------------------------------------------- 438 (852)
T ss_dssp HHHHHHHHHHHHTHHHHHHSCTTT--------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHhccchHHH--------------------------------------------------------
Confidence 999999999987665443210000
Q ss_pred cccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcCCCCCCCCCCCCCCCCCHHHHHHHhhccCcHHHHhhhccCCHHHHH
Q 000156 540 SMLSGKRPVSAAPASKKGGPVKPSAKKDGSGKQETSKLTEAPEDVEPSEMSLEEIESRLGSLIPADTVGQLKSAVWKERL 619 (2015)
Q Consensus 540 s~~~~~~P~~~~~~~~k~~~~k~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~ee~e~~~~~ll~~~l~~~L~s~~Wk~Rl 619 (2015)
-.++ . -+.++..|.+.+|..|.
T Consensus 439 --------------------------------------------------~~~~---l-----l~~L~~~L~d~~~~vr~ 460 (852)
T 4fdd_A 439 --------------------------------------------------YLKP---L-----MTELLKRILDSNKRVQE 460 (852)
T ss_dssp --------------------------------------------------THHH---H-----HHHHHHHHTCSSHHHHH
T ss_pred --------------------------------------------------HHHH---H-----HHHHHHHHhCCCHHHHH
Confidence 0011 1 14566777788999999
Q ss_pred HHHHHHHHHHHhc-cccchHHHHHHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHcCC-C-chhHHHHHHHHHHhh---h
Q 000156 620 EAISSLRQQVEAV-QNLDQSVEILVRLVCMLPGWSEKNVQVQQQVIEVINYLAATATK-F-PKKCVVLCLLGISER---V 693 (2015)
Q Consensus 620 ~a~e~L~~~v~~~-~~~~~~~~~Lv~~L~~~pg~~DsN~qV~~~~Le~l~~l~~~~~~-~-~~~~~~~il~~LveK---l 693 (2015)
.|+..|..+++.. ....++.+.++..|.. .+++.+.+....+++++..++...+. + ...++..++|.++++ +
T Consensus 461 ~a~~aL~~l~~~~~~~l~~~l~~ll~~L~~--~l~~~~~~~~~~~~~ai~~l~~~~~~~~~~~~~~~~l~p~l~~~~~~l 538 (852)
T 4fdd_A 461 AACSAFATLEEEACTELVPYLAYILDTLVF--AFSKYQHKNLLILYDAIGTLADSVGHHLNKPEYIQMLMPPLIQKWNML 538 (852)
T ss_dssp HHHHHHHHHHHHHGGGGGGGHHHHHHHHHH--HHHHCCHHHHHHHHHHHHHHHHHHGGGGCCHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHhhHhhHhHHHHHHHHHHH--HHHHhChHHHHHHHHHHHHHHHHhhhhhccHHHHHHHHHHHHHHHHhc
Confidence 9999999888763 3333444444433321 12222233344566777777765442 2 234667788888753 3
Q ss_pred cc--hhhhHHHHHHHHHHHhhhChhHH--HHHHHHHhhhCCChhHHHHHHHHHHHHHHHhCCCCCChhhHHHHHHhcCCC
Q 000156 694 AD--IKTRAHAMKCLTTFSEAVGPGFI--FERLYKIMKDHKNPKVLSEGILWMVSAVEDFGVSHLKLKDLIDFCKDTGLQ 769 (2015)
Q Consensus 694 gD--~K~r~~a~~~L~~l~e~~~~~~V--l~~L~~~l~~~KnpKv~~~~l~~L~~li~~fG~~~l~~k~li~~l~~~gL~ 769 (2015)
.| ..++ .+.+++..++...+..++ +..+++ .++..+...+.... ....-... ++
T Consensus 539 ~d~~~~~~-~~~~~l~~i~~~~g~~~~~~~~~i~~------------~~~~~l~~~l~~~~--------~~~~~~~~-~~ 596 (852)
T 4fdd_A 539 KDEDKDLF-PLLECLSSVATALQSGFLPYCEPVYQ------------RCVNLVQKTLAQAM--------LNNAQPDQ-YE 596 (852)
T ss_dssp CTTCTTHH-HHHHHHHHHHHHHGGGGHHHHHHHHH------------HHHHHHHHHHHHHH--------HHHHCTTT-SC
T ss_pred ccccHHHH-HHHHHHHHHHHHHhHhHHHHHHHHHH------------HHHHHHHHHHHHHH--------HhhcCCcc-cC
Confidence 33 2343 677888888887765432 222222 12333322221100 00000012 45
Q ss_pred CCchhHHHHHHHHHHHHHHHhChhHHhhhhhccHHHHHHHHHHHhcCCCCCCCCCcccccCccccCCCCCCCCCCCCCcc
Q 000156 770 SSAAATRNATIKLLGALHKFVGPDIKGFLADVKPALLSALDAEYEKNPFEGTVVPKKTVRASESTSSVSSGGSDGLPRED 849 (2015)
Q Consensus 770 ~sn~~VR~aA~~ll~~Ly~~~G~~l~~~L~~lkp~ll~~Le~ef~k~~~~~~p~p~R~~r~~~~~~s~~~~~~d~lprvd 849 (2015)
..+..+|..++.+++.+...+|..+.+|+.+
T Consensus 597 ~~d~~~~~~~l~~l~~l~~~l~~~~~~~~~~------------------------------------------------- 627 (852)
T 4fdd_A 597 APDKDFMIVALDLLSGLAEGLGGNIEQLVAR------------------------------------------------- 627 (852)
T ss_dssp CCCTHHHHHHHHHHHHHHHHHGGGGHHHHHT-------------------------------------------------
T ss_pred CCcchHHHHHHHHHHHHHHHHhHhHHHHhcC-------------------------------------------------
Confidence 5678899999999999999999887766511
Q ss_pred cccccchHHHHhcCCCChHHHHHHHHHHHHHHHhccccCCCCChhhHHHHHHhccccchHHHHHHHHHHHHHHHHHhChh
Q 000156 850 ISGKFTPTLVKSLESPDWKVRLESIEAVNKILEEANKRIQPAGTGELFGGLRGRLYDSNKNLVMATLITLGAVASAMGPA 929 (2015)
Q Consensus 850 Is~~L~~~ll~~l~d~~Wk~R~eale~L~~ll~~a~~~I~~~~~~eL~~~L~~rL~DsN~~V~~~Al~~l~~La~alg~~ 929 (2015)
..+.+-++..+.|+++.+|..+...+..++......+.+. +.++++.|...|.+.+..++..|+.+++.++..+|.+
T Consensus 628 --~~~~~~l~~~l~~~~~~vr~~a~~~l~~l~~~~~~~~~~~-l~~~lp~l~~~l~~~~~~v~~~a~~alg~i~~~~~~~ 704 (852)
T 4fdd_A 628 --SNILTLMYQCMQDKMPEVRQSSFALLGDLTKACFQHVKPC-IADFMPILGTNLNPEFISVCNNATWAIGEISIQMGIE 704 (852)
T ss_dssp --CCHHHHHHHHTTCSSHHHHHHHHHHHHHHHHHCGGGTGGG-HHHHHHHHHHTCCTTSHHHHHHHHHHHHHHHHHHGGG
T ss_pred --CcHHHHHHHHhCCCChhHHHHHHHHHHHHHHHhhHHHHHH-HHHHHHHHHHHcCccchHHHHHHHHHHHHHHHHhhHh
Confidence 0133456666788889999999999999997665666666 4889999999998888899999999999999999999
Q ss_pred hHHhhhHHHHHHHHHhCCC--cHHHHHHHHHHHHHHHHhcC------chhhHHHHHHHHhcCCCChhHHHHHHHHHHHHh
Q 000156 930 VEKSSKGVLSDILKCLGDN--KKHMRECTLTVLDAWLAAVH------LDKMVPYVTTALTDAKLGAEGRKDLFDWLSKQL 1001 (2015)
Q Consensus 930 f~~~~~~llp~ll~~L~D~--k~~Vr~aa~~aL~~i~~~~g------l~~ll~~l~~~L~~~k~~p~~R~~~l~~L~~~l 1001 (2015)
|.+|+..+++.++..+.+. ...+++.+..|++.++..++ +..+++.+...|.+.. +.+.|..++..+...+
T Consensus 705 ~~p~~~~il~~L~~~l~~~~~~~~~~~~a~~~igrl~~~~~~~~~~~l~~~~~~~~~~l~~~~-d~~e~~~a~~~l~~li 783 (852)
T 4fdd_A 705 MQPYIPMVLHQLVEIINRPNTPKTLLENTAITIGRLGYVCPQEVAPMLQQFIRPWCTSLRNIR-DNEEKDSAFRGICTMI 783 (852)
T ss_dssp GGGGTHHHHHHHHHHHTCSSCCHHHHHHHHHHHHHHHHHCHHHHGGGHHHHHHHHHHHHHTSC-SSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCCCCCchHHHHHHHHHHHHHHhCHHHhCccHHHHHHHHHHHhcccc-ccHHHHHHHHHHHHHH
Confidence 9999999999999999875 45799999999999998752 4667777777886432 3457888888888777
Q ss_pred ccCCCCCChhhhHHH---HHhhcCCCChHHHHHHHHHHHHHHHHcChhHHHHHhccCChHHHHHHHH
Q 000156 1002 TGLSGFPDAAHLLKP---ASIAMTDKSSDVRKAAEACIVEILRAGGQETIEKNLKDIQGPALALILE 1065 (2015)
Q Consensus 1002 ~~~~~~~~~~~ll~p---l~~~L~D~~~~VR~aA~~~L~~l~~~~G~~~~~~~l~~L~~~~~~~i~~ 1065 (2015)
...+.. +...+.. .+....+..++.+..-...|..+-..+|.+....++..|+|..+..+..
T Consensus 784 ~~~p~~--~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 848 (852)
T 4fdd_A 784 SVNPSG--VIQDFIFFCDAVASWINPKDDLRDMFCKILHGFKNQVGDENWRRFSDQFPLPLKERLAA 848 (852)
T ss_dssp HHCGGG--TGGGHHHHHHHHHTCSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHGGGCCHHHHHHHHH
T ss_pred HhChHh--HHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhCCchhHHHHHHhCCHHHHHHHHH
Confidence 655431 2222222 3445688899999999999999999999988999999999998877665
No 8
>2bpt_A Importin beta-1 subunit; nuclear transport, nucleocytoplasmic transport, nuclear trafficking, importin- beta, complex; 1.99A {Saccharomyces cerevisiae} SCOP: a.118.1.1 PDB: 2bku_B 3ea5_B* 3nd2_A
Probab=99.94 E-value=5.3e-22 Score=274.44 Aligned_cols=756 Identities=13% Similarity=0.098 Sum_probs=515.0
Q ss_pred hhhh-cCCChHHHHHHHHHHHHHhhccCCCCchHHHhhhhhhHhhhcC--CcHHHHHHHHHHHHHHHHHhc---------
Q 000156 17 EDRL-LHKNWKVRNEANIDLAALCDSITDPKDNRIRELGPLFKKTVAD--SNAPVQDKALDALIAYLKAAD--------- 84 (2015)
Q Consensus 17 ~erl-~~k~WK~R~~ayeeL~~~~~~~~d~~~~~~~~~~~~~~k~v~D--sN~~vqe~~leal~~~l~~~~--------- 84 (2015)
.+.+ .+.+-..|.+|-+.|.+ +... +.|.| ...+...+.+ .+..+...|...|-.+++..-
T Consensus 10 L~~~~~s~d~~~r~~Ae~~L~~-~~~~---~~~~~---~~~l~~il~~~~~~~~vR~~A~~~lk~~i~~~w~~~~~~~~~ 82 (861)
T 2bpt_A 10 LENSILSPDQNIRLTSETQLKK-LSND---NFLQF---AGLSSQVLIDENTKLEGRILAALTLKNELVSKDSVKTQQFAQ 82 (861)
T ss_dssp HHHHHHCSSHHHHHHHHHHHHH-HHHH---CHHHH---HHHHHHHHTCTTSCHHHHHHHHHHHHTTTCCSSHHHHHHHHH
T ss_pred HHHcccCcCHHHHHHHHHHHHH-HHhh---CHHHH---HHHHHHHHhCCCCChHHHHHHHHHHHhhccCcChHHHHHHHH
Confidence 3445 67888899999999977 4321 12444 2233444444 367788777777766653210
Q ss_pred --hh-hh-hhHHHHHHHHHHhhcCCChhHHHHHHHHHHHHHhhhhh----hhHHHHHHHHhhcC-ChhhHHHHHHHHHHH
Q 000156 85 --AD-AG-RYAKEVCDAIAAKCLTGRPKTVEKAQAVFMLWVELEAV----DVFLDVMEKAIKNK-VAKAVVPAIDVMFQA 155 (2015)
Q Consensus 85 --~~-~~-~~~~~v~~~LieK~l~~k~~~k~~a~~~ll~~~E~~~~----~~v~~~L~~~~~~K-npKv~~~~l~~L~~~ 155 (2015)
.. .. .....+-..|++-+....+.+|..+..++-.++..+-+ ..+++.|...+.+. ++.++..++.++..+
T Consensus 83 ~~~~~l~~~~~~~ik~~ll~~l~~~~~~vr~~~~~~l~~i~~~~~p~~~w~~ll~~L~~~l~~~~~~~~r~~al~~l~~l 162 (861)
T 2bpt_A 83 RWITQVSPEAKNQIKTNALTALVSIEPRIANAAAQLIAAIADIELPHGAWPELMKIMVDNTGAEQPENVKRASLLALGYM 162 (861)
T ss_dssp HHHHHSCHHHHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHHGGGTCCHHHHHHHHHHTSTTSCHHHHHHHHHHHHHH
T ss_pred hHhhhCCHHHHHHHHHHHHHHHCCCchHHHHHHHHHHHHHHHhhCcccccHHHHHHHHHHHhcCCCHHHHHHHHHHHHHH
Confidence 00 11 12234555566653335688888888887777665433 35778888888777 999999999999999
Q ss_pred HHHhCCCC--c--ChhHHHhhhhhhhcCC--ChhHHHHHHHHHHHHHHHhCCchhhHHHhhhChHHHHHHHHHHHHhcCC
Q 000156 156 LSEFGAKI--I--PPKRILKMLPELFDHQ--DQNVRASSKGLTLELCRWIGKDPVKTILFEKMRDTMKKELEVELVNVSG 229 (2015)
Q Consensus 156 l~~fG~~~--i--~~k~il~~l~~ll~~~--d~~VR~~a~~l~~ely~~lG~~~l~~~l~~~Lk~~q~keLe~~f~k~~~ 229 (2015)
.+.++... + ....+++.+...+.+. +..||..|..++..+..|++.. + .. ......
T Consensus 163 ~~~~~~~~~~~~~~~~~ll~~l~~~l~~~~~~~~vr~~al~~l~~~~~~~~~~-----~-~~--~~~~~~---------- 224 (861)
T 2bpt_A 163 CESADPQSQALVSSSNNILIAIVQGAQSTETSKAVRLAALNALADSLIFIKNN-----M-ER--EGERNY---------- 224 (861)
T ss_dssp HHTSSTTSSTTGGGHHHHHHHHHHHHSTTCCCHHHHHHHHHHHHHHGGGCHHH-----H-TS--HHHHHH----------
T ss_pred HHcCChhhhHHHHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHH-----c-cC--hhHHHH----------
Confidence 99888642 1 2456888888889988 8999999988877766554321 1 00 000000
Q ss_pred CCCCCccchhhhhHhhhhhccccCCCCCCCCCCCCCCCCCCCCCCCCCcccccccCcchhhhhhhccCChHHHHHHHHHH
Q 000156 230 TARPTRKIRAEQDKELGQELISEDVGPGPSEESTADVPPEIDEYELVDPVDILTPLEKSGFWEGVKATKWSERKDAVAEL 309 (2015)
Q Consensus 230 ~~~P~R~~rs~~~~~~~~ea~~~~~~~~~~~~~~~~~~~~iD~~dl~~~vdIl~kl~~~~f~~~l~s~kWkeR~eaL~~L 309 (2015)
++ ..+...+.+.+|+.|..+++.|
T Consensus 225 ---------------------------------------------------ll-----~~l~~~~~~~~~~~r~~a~~~l 248 (861)
T 2bpt_A 225 ---------------------------------------------------LM-----QVVCEATQAEDIEVQAAAFGCL 248 (861)
T ss_dssp ---------------------------------------------------HH-----HHHHHHHTCSCHHHHHHHHHHH
T ss_pred ---------------------------------------------------HH-----HHHHHHhcCCCHHHHHHHHHHH
Confidence 00 1122234667899999999999
Q ss_pred HHHhc-CCCCCCCChH-HHHHHHHHHhcccCHHHHHHHHHHHHHHHHHhh----------------h-cchhhhHhHHHH
Q 000156 310 TKLAS-TKRIAPGDFT-EVCRTLKKLITDVNIAVAVEAIQAIGNLARGLR----------------T-HFSGSSRFLLPV 370 (2015)
Q Consensus 310 ~~l~~-~~ki~~~~y~-~l~~~L~k~l~D~N~~V~~~A~~~l~~La~~L~----------------~-~f~~~~~~llp~ 370 (2015)
..++. .+......+. .++..+...+.|.+..|+..|+.++..++.... . .+.++...++|.
T Consensus 249 ~~l~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~vr~~a~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~ 328 (861)
T 2bpt_A 249 CKIMSKYYTFMKPYMEQALYALTIATMKSPNDKVASMTVEFWSTICEEEIDIAYELAQFPQSPLQSYNFALSSIKDVVPN 328 (861)
T ss_dssp HHHHHHHGGGCHHHHHHTHHHHHHHHTTCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCSCCCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHhhhhhhhhccCCchhhHHHHHHHHHHHHHH
Confidence 88874 3332222334 677777788889999999999999999988642 1 134677899999
Q ss_pred HHHHhcc-------CcHHHHHHHHHHHHHHHHh-cCCChHhHHHHHHHHhhcCChHHHHHHHHHHHHHHHhcChhHHHHh
Q 000156 371 LLEKLKE-------KKPTVAESLTQTLQAMHKA-GCLNLVDVVEDVKTSVKNKVPLVRSLTLNWVTFCIETSSKAAVLKV 442 (2015)
Q Consensus 371 LL~klkd-------kk~~V~~aa~~aL~al~~~-~~~~l~~il~~l~~~L~~Knp~vR~~~l~~L~~~l~~~~~~~l~~~ 442 (2015)
++..+.+ ....+|.++..+|..+... +...+..+++.+...+++.+|.+|..++..+..+.....+..+.++
T Consensus 329 ll~~l~~~~~d~~d~~~~~r~~a~~~L~~l~~~~~~~~~~~l~~~l~~~l~~~~~~~r~~a~~~l~~i~~~~~~~~~~~~ 408 (861)
T 2bpt_A 329 LLNLLTRQNEDPEDDDWNVSMSAGACLQLFAQNCGNHILEPVLEFVEQNITADNWRNREAAVMAFGSIMDGPDKVQRTYY 408 (861)
T ss_dssp HHHHTTCCCCC-CCCCCHHHHHHHHHHHHHHHHHGGGGHHHHHHHHHHHTTCSSHHHHHHHHHHHHHTSSSSCHHHHHHH
T ss_pred HHHHHHhcccccccccCcHHHHHHHHHHHHHHHccHhHHHHHHHHHHHHcCCCChhHHHHHHHHHHHHHcCCCHHHHHHH
Confidence 9999974 3458999999999998875 2223566777778888899999999999999988766554556678
Q ss_pred hhhHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhCchHHHHHHHhccHHHHHHHHHHHhcCCCCCCCCCCCccccCCCCC
Q 000156 443 HKDYVPICMECLNDGTPEVRDAAFSVLAAIAKSVGMRPLERSIEKLDDVRRNKLSEMIAGSGGDVATGTSSARVQTSGGS 522 (2015)
Q Consensus 443 l~~l~p~l~k~L~Ds~~~VR~aA~~al~~l~~~~Ge~~~~~~l~~Ld~~~~kkI~e~~~~~~~~~~~~~~~~~~~~~~~s 522 (2015)
++.++|.+...+.|.++.||.++..+++.+...++.. + . .
T Consensus 409 l~~il~~l~~~l~d~~~~vr~~a~~~l~~l~~~~~~~-~-------~------------~-------------------- 448 (861)
T 2bpt_A 409 VHQALPSILNLMNDQSLQVKETTAWCIGRIADSVAES-I-------D------------P-------------------- 448 (861)
T ss_dssp HHHHHHHHHHGGGCSCHHHHHHHHHHHHHHHHHHGGG-S-------C------------T--------------------
T ss_pred HHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHhhhh-c-------C------------C--------------------
Confidence 8999999999999999999999999888887665531 0 0 0
Q ss_pred CCCCCCCcccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcCCCCCCCCCCCCCCCCCHHHHHHHhhccC
Q 000156 523 VPSVEASESSFVRKSAASMLSGKRPVSAAPASKKGGPVKPSAKKDGSGKQETSKLTEAPEDVEPSEMSLEEIESRLGSLI 602 (2015)
Q Consensus 523 ~~~~~~~~~~~~~~~~~s~~~~~~P~~~~~~~~k~~~~k~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~ee~e~~~~~ll 602 (2015)
.. ..+++
T Consensus 449 ----------------------------------------------------------------~~-~~~~~-------- 455 (861)
T 2bpt_A 449 ----------------------------------------------------------------QQ-HLPGV-------- 455 (861)
T ss_dssp ----------------------------------------------------------------TT-THHHH--------
T ss_pred ----------------------------------------------------------------HH-HHHHH--------
Confidence 00 00111
Q ss_pred cHHHHhhhccCCHHHHHHHHHHHHHHHHhcc-----ccchHHHHHHHHHhcCCCC--cccHHHHHHHHHHHHHHHHHHcC
Q 000156 603 PADTVGQLKSAVWKERLEAISSLRQQVEAVQ-----NLDQSVEILVRLVCMLPGW--SEKNVQVQQQVIEVINYLAATAT 675 (2015)
Q Consensus 603 ~~~l~~~L~s~~Wk~Rl~a~e~L~~~v~~~~-----~~~~~~~~Lv~~L~~~pg~--~DsN~qV~~~~Le~l~~l~~~~~ 675 (2015)
-+.++..|.+. ++.|..+...|..+++..+ ...++.+.++..|.. .+ .|.+..|+..+++++..++...+
T Consensus 456 l~~l~~~l~~~-~~v~~~a~~al~~l~~~~~~~~~~~l~~~~~~il~~L~~--~l~~~d~~~~vr~~a~~al~~l~~~~~ 532 (861)
T 2bpt_A 456 VQACLIGLQDH-PKVATNCSWTIINLVEQLAEATPSPIYNFYPALVDGLIG--AANRIDNEFNARASAFSALTTMVEYAT 532 (861)
T ss_dssp HHHHHHHHTSC-HHHHHHHHHHHHHHHHHHSSSSSCGGGGGHHHHHHHHHH--HHTCSCCGGGHHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHhccC-hHHHHHHHHHHHHHHHhcccccchhhHHHHHHHHHHHHH--HHhCcCcchHHHHHHHHHHHHHHHHcc
Confidence 13345556554 8888888888888877643 122333333333221 11 25556788999999999998766
Q ss_pred CCchhHHHHHHHHHHhhhcchhhhHHHHHHHHHHHhhhChhHHHHHHHHHhhhCCChhHHHHHHHHHHHHHHHhCCCCCC
Q 000156 676 KFPKKCVVLCLLGISERVADIKTRAHAMKCLTTFSEAVGPGFIFERLYKIMKDHKNPKVLSEGILWMVSAVEDFGVSHLK 755 (2015)
Q Consensus 676 ~~~~~~~~~il~~LveKlgD~K~r~~a~~~L~~l~e~~~~~~Vl~~L~~~l~~~KnpKv~~~~l~~L~~li~~fG~~~l~ 755 (2015)
.-....+..++|.+++.+.+... .... +...-.....+.++..++..|..++..+|....+
T Consensus 533 ~~~~~~~~~l~~~l~~~l~~~~~--------------~~~~-----i~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~ 593 (861)
T 2bpt_A 533 DTVAETSASISTFVMDKLGQTMS--------------VDEN-----QLTLEDAQSLQELQSNILTVLAAVIRKSPSSVEP 593 (861)
T ss_dssp GGGHHHHHHHHHHHHHHHHHHTT--------------SCGG-----GCCHHHHHHHHHHHHHHHHHHHHHHHHCGGGTGG
T ss_pred hhhHHHHHHHHHHHHHHHHHHHh--------------hhcc-----cCChhhHHHHHHHHHHHHHHHHHHHHHhhhhhHH
Confidence 43344555666666665543100 0000 0000000123456777888888888877753222
Q ss_pred -hhhHHHHHHhcCCCCCch-hHHHHHHHHHHHHHHHhChhHHhhhhhccHHHHHHHHHHHhcCCCCCCCCCcccccCccc
Q 000156 756 -LKDLIDFCKDTGLQSSAA-ATRNATIKLLGALHKFVGPDIKGFLADVKPALLSALDAEYEKNPFEGTVVPKKTVRASES 833 (2015)
Q Consensus 756 -~k~li~~l~~~gL~~sn~-~VR~aA~~ll~~Ly~~~G~~l~~~L~~lkp~ll~~Le~ef~k~~~~~~p~p~R~~r~~~~ 833 (2015)
...+++.+... +.+.+. .||..+..+++.+....|..+.+|+..+-|.+++.+
T Consensus 594 ~~~~l~~~l~~~-l~~~~~~~v~~~~~~~l~~l~~~~~~~~~~~l~~i~~~l~~~l------------------------ 648 (861)
T 2bpt_A 594 VADMLMGLFFRL-LEKKDSAFIEDDVFYAISALAASLGKGFEKYLETFSPYLLKAL------------------------ 648 (861)
T ss_dssp GHHHHHHHHHHH-HHSTTGGGTHHHHHHHHHHHHHHHGGGGHHHHHHHHHHHHHHH------------------------
T ss_pred HHHHHHHHHHHH-HccCCCCcHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHh------------------------
Confidence 34577777666 777766 899999999999999999888877766555444333
Q ss_pred cCCCCCCCCCCCCCcccccccchHHHHhcCCCChHHHHHHHHHHHHHHHhccccCCCCChhhHHHHHHhccccch--HHH
Q 000156 834 TSSVSSGGSDGLPREDISGKFTPTLVKSLESPDWKVRLESIEAVNKILEEANKRIQPAGTGELFGGLRGRLYDSN--KNL 911 (2015)
Q Consensus 834 ~~s~~~~~~d~lprvdIs~~L~~~ll~~l~d~~Wk~R~eale~L~~ll~~a~~~I~~~~~~eL~~~L~~rL~DsN--~~V 911 (2015)
.+++|.+|..++..+..++...+..+.+. ..++++.|...+.|.+ ..+
T Consensus 649 -----------------------------~~~~~~vr~~a~~~l~~l~~~~~~~~~~~-~~~l~~~l~~~l~~~~~~~~v 698 (861)
T 2bpt_A 649 -----------------------------NQVDSPVSITAVGFIADISNSLEEDFRRY-SDAMMNVLAQMISNPNARREL 698 (861)
T ss_dssp -----------------------------HCTTSHHHHHHHHHHHHHHHHTGGGGHHH-HHHHHHHHHHHHHCTTCCTTH
T ss_pred -----------------------------ccccHHHHHHHHHHHHHHHHHhchhccch-HHHHHHHHHHHhCCccccHhh
Confidence 34466788889999998887554444443 3778888888888765 889
Q ss_pred HHHHHHHHHHHHHHhChhhHHhhhHHHHHHHHHhCCCc-----------HHHHHHHHHHHHHHHHhcC-----chhhHHH
Q 000156 912 VMATLITLGAVASAMGPAVEKSSKGVLSDILKCLGDNK-----------KHMRECTLTVLDAWLAAVH-----LDKMVPY 975 (2015)
Q Consensus 912 ~~~Al~~l~~La~alg~~f~~~~~~llp~ll~~L~D~k-----------~~Vr~aa~~aL~~i~~~~g-----l~~ll~~ 975 (2015)
+..++.+++.++..+|..|.+|+..++|.++..+..+. ..+|.++.+++..++..++ +..+++.
T Consensus 699 r~~~~~~l~~l~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~d~d~~~~~~~vr~~~l~~~~~i~~~l~~~~~~~~~~~~~ 778 (861)
T 2bpt_A 699 KPAVLSVFGDIASNIGADFIPYLNDIMALCVAAQNTKPENGTLEALDYQIKVLEAVLDAYVGIVAGLHDKPEALFPYVGT 778 (861)
T ss_dssp HHHHHHHHHHHHHHHGGGGHHHHHHHHHHHHHHHTCCCSSSSHHHHHHHHHHHHHHHHHHHHHHHHTTTCHHHHGGGHHH
T ss_pred hHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHH
Confidence 99999999999999999999999999999999987432 4699999999999998887 4445555
Q ss_pred HHHHH----hcCC--CChhHHHHHHHHHHHHhccC-CCC--CChh-hhHHHHHhhcC---CCChHHHHHHHHHHHHHHHH
Q 000156 976 VTTAL----TDAK--LGAEGRKDLFDWLSKQLTGL-SGF--PDAA-HLLKPASIAMT---DKSSDVRKAAEACIVEILRA 1042 (2015)
Q Consensus 976 l~~~L----~~~k--~~p~~R~~~l~~L~~~l~~~-~~~--~~~~-~ll~pl~~~L~---D~~~~VR~aA~~~L~~l~~~ 1042 (2015)
+...| .+.. ++..+|..++.++......+ +.. +.+. .+++.+++++. +.+..|+..|.-++..+.+.
T Consensus 779 i~~~l~~~~~d~~~~~~~~vr~~a~~~l~~l~~~~~g~~~~~~~~~~~~~~ll~~l~~~~~~~~~~~~~~~wa~~~~~~~ 858 (861)
T 2bpt_A 779 IFQFIAQVAEDPQLYSEDATSRAAVGLIGDIAAMFPDGSIKQFYGQDWVIDYIKRTRSGQLFSQATKDTARWAREQQKRQ 858 (861)
T ss_dssp HHHHHHHHHHCHHHHTSHHHHHHHHHHHHHHHHHCTTSTTGGGTTCHHHHHHHHHHHHCSSSCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCcccCCcHHHHHHHHHHHHHHHHHcCCchHHHHHhcHHHHHHHHHHhhccCCCHHHHHHHHHHHHHHHHH
Confidence 44443 3310 14689999999888777766 332 2344 56777888765 67788999999888887654
Q ss_pred c
Q 000156 1043 G 1043 (2015)
Q Consensus 1043 ~ 1043 (2015)
+
T Consensus 859 ~ 859 (861)
T 2bpt_A 859 L 859 (861)
T ss_dssp H
T ss_pred h
Confidence 3
No 9
>4fdd_A Transportin-1; heat repeats, karyopherin, nuclear import, protein transport importin, transportin, transport protein; 2.30A {Homo sapiens} PDB: 2ot8_A 2h4m_A 2z5k_A 2z5j_A 2qmr_A 2z5m_A 2z5n_A 2z5o_A 1qbk_B*
Probab=99.93 E-value=1.1e-21 Score=271.47 Aligned_cols=708 Identities=10% Similarity=0.085 Sum_probs=494.6
Q ss_pred HHHhhcCCChhHHHHHHHHHHHHHhhhhhh--hHHHHHHHHhhcCChhhHHHHHHHHHHHHHHhCCCCcCh--h-HHHhh
Q 000156 98 IAAKCLTGRPKTVEKAQAVFMLWVELEAVD--VFLDVMEKAIKNKVAKAVVPAIDVMFQALSEFGAKIIPP--K-RILKM 172 (2015)
Q Consensus 98 LieK~l~~k~~~k~~a~~~ll~~~E~~~~~--~v~~~L~~~~~~KnpKv~~~~l~~L~~~l~~fG~~~i~~--k-~il~~ 172 (2015)
+++..++....+|..|.+-+..+-. .++ ..+-.|+..+.+.++.++..|...|.+.+..+-. .++. + .+...
T Consensus 18 ~l~~~~s~d~~~r~~Ae~~L~~~~~--~p~~~~~l~~il~~~~~~~~~vR~~a~~~Lkn~i~~~w~-~~~~~~~~~ik~~ 94 (852)
T 4fdd_A 18 LLKESQSPDTTIQRTVQQKLEQLNQ--YPDFNNYLIFVLTKLKSEDEPTRSLSGLILKNNVKAHFQ-NFPNGVTDFIKSE 94 (852)
T ss_dssp HHHHHTCSCHHHHHHHHHHHHHHTT--SHHHHHHHHHHHHTCTTSCHHHHHHHHHHHHHHTTTSGG-GCCHHHHHHHHHH
T ss_pred HHHHHhCcCHHHHHHHHHHHHHHHh--CCCHHHHHHHHHhccCCCChHHHHHHHHHHHHHHHHccC-CCCHHHHHHHHHH
Confidence 3444466678889999887765532 233 2233344444678889999999999887764322 2332 2 25567
Q ss_pred hhhhhcCCChhHHHHHHHHHHHHHHHhCCchhhHHHhhhChHHHHHHHHHHHHhcCCCCCCCccchhhhhHhhhhhcccc
Q 000156 173 LPELFDHQDQNVRASSKGLTLELCRWIGKDPVKTILFEKMRDTMKKELEVELVNVSGTARPTRKIRAEQDKELGQELISE 252 (2015)
Q Consensus 173 l~~ll~~~d~~VR~~a~~l~~ely~~lG~~~l~~~l~~~Lk~~q~keLe~~f~k~~~~~~P~R~~rs~~~~~~~~ea~~~ 252 (2015)
+.+.+.+.++.||..+..++..+.++.+.+.. .
T Consensus 95 ll~~l~~~~~~vr~~~a~~i~~ia~~~~~~~w-----p------------------------------------------ 127 (852)
T 4fdd_A 95 CLNNIGDSSPLIRATVGILITTIASKGELQNW-----P------------------------------------------ 127 (852)
T ss_dssp HHTTTTCSSHHHHHHHHHHHHHHHHHTTTTTC-----T------------------------------------------
T ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHhcCcccc-----H------------------------------------------
Confidence 77778899999999888887777665432100 0
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCcccccccCcchhhhhhhccCChHHHHHHHHHHHHHhc-CCCC-----CCCChHHH
Q 000156 253 DVGPGPSEESTADVPPEIDEYELVDPVDILTPLEKSGFWEGVKATKWSERKDAVAELTKLAS-TKRI-----APGDFTEV 326 (2015)
Q Consensus 253 ~~~~~~~~~~~~~~~~~iD~~dl~~~vdIl~kl~~~~f~~~l~s~kWkeR~eaL~~L~~l~~-~~ki-----~~~~y~~l 326 (2015)
++ + +.+.+.+.+.+|..|..++..|..+.. .+.. .......+
T Consensus 128 ---------------------------~l---l--~~L~~~l~~~~~~~r~~al~~L~~i~~~~~~~~~~~~~~~~~~~i 175 (852)
T 4fdd_A 128 ---------------------------DL---L--PKLCSLLDSEDYNTCEGAFGALQKICEDSAEILDSDVLDRPLNIM 175 (852)
T ss_dssp ---------------------------TH---H--HHHHHHHSCSSHHHHHHHHHHHHHHHHHHTTHHHHCSSSSCHHHH
T ss_pred ---------------------------HH---H--HHHHHHHcCCCHHHHHHHHHHHHHHHHHhHHHhchhhhcchHHHH
Confidence 00 1 234555666778888999998888773 2221 12336778
Q ss_pred HHHHHHHhcccCHHHHHHHHHHHHHHHHHhhhcchhhhHhHHHHHHHHhccCcHHHHHHHHHHHHHHHHhc----CCChH
Q 000156 327 CRTLKKLITDVNIAVAVEAIQAIGNLARGLRTHFSGSSRFLLPVLLEKLKEKKPTVAESLTQTLQAMHKAG----CLNLV 402 (2015)
Q Consensus 327 ~~~L~k~l~D~N~~V~~~A~~~l~~La~~L~~~f~~~~~~llp~LL~klkdkk~~V~~aa~~aL~al~~~~----~~~l~ 402 (2015)
++.|.+.++|.+..|+..|+.++..+.......+..+...+++.++..+.|....||..+..+|..++... ...+.
T Consensus 176 l~~l~~~l~~~~~~vR~~A~~aL~~~~~~~~~~~~~~~~~~l~~l~~~~~d~~~~vr~~a~~~L~~l~~~~~~~~~~~l~ 255 (852)
T 4fdd_A 176 IPKFLQFFKHSSPKIRSHAVACVNQFIISRTQALMLHIDSFIENLFALAGDEEPEVRKNVCRALVMLLEVRMDRLLPHMH 255 (852)
T ss_dssp HHHHTTTTTCSSHHHHHHHHHHHHTTTTTTCHHHHTSHHHHHHHHHHHHTCCCHHHHHHHHHHHHHHHHHCHHHHGGGHH
T ss_pred HHHHHHHhcCCCHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHH
Confidence 88899999999999999999999988876666677788899999999999999999999999999998761 12356
Q ss_pred hHHHHHHHHhhcCChHHHHHHHHHHHHHHHhcC-hhHHHHhhhhHHHHHHHHh-----------cC-----------CCH
Q 000156 403 DVVEDVKTSVKNKVPLVRSLTLNWVTFCIETSS-KAAVLKVHKDYVPICMECL-----------ND-----------GTP 459 (2015)
Q Consensus 403 ~il~~l~~~L~~Knp~vR~~~l~~L~~~l~~~~-~~~l~~~l~~l~p~l~k~L-----------~D-----------s~~ 459 (2015)
.+++.+...+++..+.+|..++.|+..+.+... +..+.+++..++|.+...+ .| .+-
T Consensus 256 ~l~~~l~~~~~~~~~~vr~~a~e~l~~l~~~~~~~~~~~~~~~~l~p~ll~~l~~~e~d~~~~~~d~~ed~~~dd~~~~~ 335 (852)
T 4fdd_A 256 NIVEYMLQRTQDQDENVALEACEFWLTLAEQPICKDVLVRHLPKLIPVLVNGMKYSDIDIILLKGDVEGGSGGDDTISDW 335 (852)
T ss_dssp HHHHHHHHHHTCSSHHHHHHHHHHHHHHTTSTTHHHHHTTTHHHHHHHHHHHTSCCHHHHHHHHC------------CCC
T ss_pred HHHHHHHHHccCCcHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHcCCcHhHHHHhcCCcccccccccccccc
Confidence 778888888899999999999999988654321 2234456788899999888 33 334
Q ss_pred HHHHHHHHHHHHHHHHhCchHHHHHHHhccHHHHHHHHHHHhcCCCCCCCCCCCccccCCCCCCCCCCCCcccccccccc
Q 000156 460 EVRDAAFSVLAAIAKSVGMRPLERSIEKLDDVRRNKLSEMIAGSGGDVATGTSSARVQTSGGSVPSVEASESSFVRKSAA 539 (2015)
Q Consensus 460 ~VR~aA~~al~~l~~~~Ge~~~~~~l~~Ld~~~~kkI~e~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~ 539 (2015)
.||.+|..+++.+...+|+..+..+
T Consensus 336 ~vr~~a~~~L~~la~~~~~~~~~~l------------------------------------------------------- 360 (852)
T 4fdd_A 336 NLRKCSAAALDVLANVYRDELLPHI------------------------------------------------------- 360 (852)
T ss_dssp CHHHHHHHHHHHHHHHHGGGGHHHH-------------------------------------------------------
T ss_pred hHHHHHHHHHHHHHHhccHHHHHHH-------------------------------------------------------
Confidence 5677777777777666654311110
Q ss_pred cccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcCCCCCCCCCCCCCCCCCHHHHHHHhhccCcHHHHhhhccCCHHHHH
Q 000156 540 SMLSGKRPVSAAPASKKGGPVKPSAKKDGSGKQETSKLTEAPEDVEPSEMSLEEIESRLGSLIPADTVGQLKSAVWKERL 619 (2015)
Q Consensus 540 s~~~~~~P~~~~~~~~k~~~~k~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~ee~e~~~~~ll~~~l~~~L~s~~Wk~Rl 619 (2015)
.+-+.+.+.|.+|+.|.
T Consensus 361 ---------------------------------------------------------------~~~l~~~l~~~~~~~R~ 377 (852)
T 4fdd_A 361 ---------------------------------------------------------------LPLLKELLFHHEWVVKE 377 (852)
T ss_dssp ---------------------------------------------------------------HHHHHHHHTCSSHHHHH
T ss_pred ---------------------------------------------------------------HHHHHHHhcCCCHHHHH
Confidence 12234456778999999
Q ss_pred HHHHHHHHHHHhccc-cchHHHHHHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHcC-CCchhHHHHHHHHHHhhhcc--
Q 000156 620 EAISSLRQQVEAVQN-LDQSVEILVRLVCMLPGWSEKNVQVQQQVIEVINYLAATAT-KFPKKCVVLCLLGISERVAD-- 695 (2015)
Q Consensus 620 ~a~e~L~~~v~~~~~-~~~~~~~Lv~~L~~~pg~~DsN~qV~~~~Le~l~~l~~~~~-~~~~~~~~~il~~LveKlgD-- 695 (2015)
+|+..|+.+.++... .....+.++..+.. .++|.+..|+..++.++..+.+..+ ......+..+++.++..+.|
T Consensus 378 aa~~alg~i~~~~~~~~~~~l~~~l~~l~~--~l~d~~~~Vr~~a~~~l~~l~~~~~~~~~~~~~~~ll~~L~~~L~d~~ 455 (852)
T 4fdd_A 378 SGILVLGAIAEGCMQGMIPYLPELIPHLIQ--CLSDKKALVRSITCWTLSRYAHWVVSQPPDTYLKPLMTELLKRILDSN 455 (852)
T ss_dssp HHHHHHHHTTTTTHHHHGGGHHHHHHHHHH--HTTCSSHHHHHHHHHHHHHTHHHHHHSCTTTTHHHHHHHHHHHHTCSS
T ss_pred HHHHHHHHHHhcchHHHHHHHHHHHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHhCCC
Confidence 999999988765322 12233445555432 4689999999999999998887543 22345677889999988876
Q ss_pred hhhhHHHHHHHHHHHhhhChh------HHHHHHHHHhhhCCChhHHHHHHHHHHHHHHHhCCCCCC---hhhHHHHHH--
Q 000156 696 IKTRAHAMKCLTTFSEAVGPG------FIFERLYKIMKDHKNPKVLSEGILWMVSAVEDFGVSHLK---LKDLIDFCK-- 764 (2015)
Q Consensus 696 ~K~r~~a~~~L~~l~e~~~~~------~Vl~~L~~~l~~~KnpKv~~~~l~~L~~li~~fG~~~l~---~k~li~~l~-- 764 (2015)
.++|..|..+|..+++..+.. .+++.++..+ +..+.+....++..+..++...|..... +..+++.+.
T Consensus 456 ~~vr~~a~~aL~~l~~~~~~~l~~~l~~ll~~L~~~l-~~~~~~~~~~~~~ai~~l~~~~~~~~~~~~~~~~l~p~l~~~ 534 (852)
T 4fdd_A 456 KRVQEAACSAFATLEEEACTELVPYLAYILDTLVFAF-SKYQHKNLLILYDAIGTLADSVGHHLNKPEYIQMLMPPLIQK 534 (852)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGGGGGHHHHHHHHHHHH-HHCCHHHHHHHHHHHHHHHHHHGGGGCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhhHhhHhHHHHHHHHHHHHH-HHhChHHHHHHHHHHHHHHHHhhhhhccHHHHHHHHHHHHHH
Confidence 478999999999999876543 2444444443 3334455444555555555554532111 233444433
Q ss_pred -hcCCCCCchhHHHHHHHHHHHHHHHhChhHHhhhhhccHHHHHHHHHHHhcCCCCCCCCCcccccCccccCCCCCCCCC
Q 000156 765 -DTGLQSSAAATRNATIKLLGALHKFVGPDIKGFLADVKPALLSALDAEYEKNPFEGTVVPKKTVRASESTSSVSSGGSD 843 (2015)
Q Consensus 765 -~~gL~~sn~~VR~aA~~ll~~Ly~~~G~~l~~~L~~lkp~ll~~Le~ef~k~~~~~~p~p~R~~r~~~~~~s~~~~~~d 843 (2015)
.. +.+.++.+| .++++++.+...+|..+.+|+..+-+.++..+...+.+..... .. .+
T Consensus 535 ~~~-l~d~~~~~~-~~~~~l~~i~~~~g~~~~~~~~~i~~~~~~~l~~~l~~~~~~~---------~~----------~~ 593 (852)
T 4fdd_A 535 WNM-LKDEDKDLF-PLLECLSSVATALQSGFLPYCEPVYQRCVNLVQKTLAQAMLNN---------AQ----------PD 593 (852)
T ss_dssp HHH-SCTTCTTHH-HHHHHHHHHHHHHGGGGHHHHHHHHHHHHHHHHHHHHHHHHHH---------HC----------TT
T ss_pred HHh-cccccHHHH-HHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHHHHHHhh---------cC----------Cc
Confidence 33 677788887 7899999999999999999998888877777766543210000 00 00
Q ss_pred CCCCcccccccchHHHHhcCCCChHHHHHHHHHHHHHHHhccccCCCCC-hhhHHHHHHhccccchHHHHHHHHHHHHHH
Q 000156 844 GLPREDISGKFTPTLVKSLESPDWKVRLESIEAVNKILEEANKRIQPAG-TGELFGGLRGRLYDSNKNLVMATLITLGAV 922 (2015)
Q Consensus 844 ~lprvdIs~~L~~~ll~~l~d~~Wk~R~eale~L~~ll~~a~~~I~~~~-~~eL~~~L~~rL~DsN~~V~~~Al~~l~~L 922 (2015)
..+..+-..|..+++.+..++...+..+.+.. -..++..+...+.|.+..|+..++.+++.+
T Consensus 594 -----------------~~~~~d~~~~~~~l~~l~~l~~~l~~~~~~~~~~~~~~~~l~~~l~~~~~~vr~~a~~~l~~l 656 (852)
T 4fdd_A 594 -----------------QYEAPDKDFMIVALDLLSGLAEGLGGNIEQLVARSNILTLMYQCMQDKMPEVRQSSFALLGDL 656 (852)
T ss_dssp -----------------TSCCCCTHHHHHHHHHHHHHHHHHGGGGHHHHHTCCHHHHHHHHTTCSSHHHHHHHHHHHHHH
T ss_pred -----------------ccCCCcchHHHHHHHHHHHHHHHHhHhHHHHhcCCcHHHHHHHHhCCCChhHHHHHHHHHHHH
Confidence 00111223577888899998876544444321 057889999999999999999999999999
Q ss_pred HHHhChhhHHhhhHHHHHHHHHhCCCcHHHHHHHHHHHHHHHHhcC------chhhHHHHHHHHhcCCCChhHHHHHHHH
Q 000156 923 ASAMGPAVEKSSKGVLSDILKCLGDNKKHMRECTLTVLDAWLAAVH------LDKMVPYVTTALTDAKLGAEGRKDLFDW 996 (2015)
Q Consensus 923 a~alg~~f~~~~~~llp~ll~~L~D~k~~Vr~aa~~aL~~i~~~~g------l~~ll~~l~~~L~~~k~~p~~R~~~l~~ 996 (2015)
+..+|..|.+|+..++|.+++.|.+....+|..|..+++.++.++| +..+++.+...|.++..+..++..++.-
T Consensus 657 ~~~~~~~~~~~l~~~lp~l~~~l~~~~~~v~~~a~~alg~i~~~~~~~~~p~~~~il~~L~~~l~~~~~~~~~~~~a~~~ 736 (852)
T 4fdd_A 657 TKACFQHVKPCIADFMPILGTNLNPEFISVCNNATWAIGEISIQMGIEMQPYIPMVLHQLVEIINRPNTPKTLLENTAIT 736 (852)
T ss_dssp HHHCGGGTGGGHHHHHHHHHHTCCTTSHHHHHHHHHHHHHHHHHHGGGGGGGTHHHHHHHHHHHTCSSCCHHHHHHHHHH
T ss_pred HHHhhHHHHHHHHHHHHHHHHHcCccchHHHHHHHHHHHHHHHHhhHhHHHHHHHHHHHHHHHhCCCCCCchHHHHHHHH
Confidence 9999999999999999999999998889999999999999999886 3556667777777654445677766666
Q ss_pred HHHHhccCCC--CCChhhhHHHHHhhcCC-CChHHHHHHHHHHHHHHHHcChh
Q 000156 997 LSKQLTGLSG--FPDAAHLLKPASIAMTD-KSSDVRKAAEACIVEILRAGGQE 1046 (2015)
Q Consensus 997 L~~~l~~~~~--~~~~~~ll~pl~~~L~D-~~~~VR~aA~~~L~~l~~~~G~~ 1046 (2015)
+.+.....+. .+.+..++.+++..|.+ .+.+.|..|..+|-.++..-+..
T Consensus 737 igrl~~~~~~~~~~~l~~~~~~~~~~l~~~~d~~e~~~a~~~l~~li~~~p~~ 789 (852)
T 4fdd_A 737 IGRLGYVCPQEVAPMLQQFIRPWCTSLRNIRDNEEKDSAFRGICTMISVNPSG 789 (852)
T ss_dssp HHHHHHHCHHHHGGGHHHHHHHHHHHHHTSCSSHHHHHHHHHHHHHHHHCGGG
T ss_pred HHHHHHhCHHHhCccHHHHHHHHHHHhccccccHHHHHHHHHHHHHHHhChHh
Confidence 6655444322 24567788888888854 56667999999999998886653
No 10
>1b3u_A Protein (protein phosphatase PP2A); scaffold protein, phosphorylation, heat repeat; 2.30A {Homo sapiens} SCOP: a.118.1.2 PDB: 2ie4_A* 2ie3_A* 2npp_A* 3k7v_A* 3k7w_A* 3fga_A* 2pf4_A 2iae_A 2nym_A* 2nyl_A* 3dw8_A* 2pkg_A 3c5w_A
Probab=99.93 E-value=1.7e-23 Score=276.41 Aligned_cols=553 Identities=17% Similarity=0.165 Sum_probs=383.0
Q ss_pred hhhhhhhccCChHHHHHHHHHHHHHhcCCCCCC-CChHHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHhhhcchhhhHh
Q 000156 288 SGFWEGVKATKWSERKDAVAELTKLASTKRIAP-GDFTEVCRTLKKLITDVNIAVAVEAIQAIGNLARGLRTHFSGSSRF 366 (2015)
Q Consensus 288 ~~f~~~l~s~kWkeR~eaL~~L~~l~~~~ki~~-~~y~~l~~~L~k~l~D~N~~V~~~A~~~l~~La~~L~~~f~~~~~~ 366 (2015)
..+...+.+.+|+.|..|+..|..++.. +.+ ....++++.|...+ |.+..|+..++.+++.++..++.. .|...
T Consensus 13 ~~l~~~l~s~~~~~R~~A~~~l~~i~~~--~~~~~~~~~l~~~L~~~~-d~~~~vr~~~~~~L~~~~~~~~~~--~~~~~ 87 (588)
T 1b3u_A 13 AVLIDELRNEDVQLRLNSIKKLSTIALA--LGVERTRSELLPFLTDTI-YDEDEVLLALAEQLGTFTTLVGGP--EYVHC 87 (588)
T ss_dssp HHHHHHTTCSCHHHHHHHHHTHHHHHHH--SCHHHHHHTHHHHHHHTC-CCCHHHHHHHHHHHTTCSGGGTSG--GGGGG
T ss_pred HHHHHHhhcccHHHHHHHHHhHHHHHHH--hCHHHHHHHHHHHHHHhc-CCcHHHHHHHHHHHHHHHhccCcH--HHHHH
Confidence 3577889999999999999999887631 111 12346778887766 777889999999998877665542 57788
Q ss_pred HHHHHHHHhccCcHHHHHHHHHHHHHHHHhcCCChH----hHHHHHHHHhhcCChHHHHHHHHHHHHHHHhcChhHHHHh
Q 000156 367 LLPVLLEKLKEKKPTVAESLTQTLQAMHKAGCLNLV----DVVEDVKTSVKNKVPLVRSLTLNWVTFCIETSSKAAVLKV 442 (2015)
Q Consensus 367 llp~LL~klkdkk~~V~~aa~~aL~al~~~~~~~l~----~il~~l~~~L~~Knp~vR~~~l~~L~~~l~~~~~~~l~~~ 442 (2015)
++|.|...+.+....||+++..+|..++.. .+.. .+++.+....++.++.+|..++.++..+....+.. .
T Consensus 88 ll~~L~~l~~~~~~~vR~~a~~~L~~l~~~--~~~~~~~~~l~~~l~~l~~~~~~~~R~~a~~~l~~~~~~~~~~----~ 161 (588)
T 1b3u_A 88 LLPPLESLATVEETVVRDKAVESLRAISHE--HSPSDLEAHFVPLVKRLAGGDWFTSRTSACGLFSVCYPRVSSA----V 161 (588)
T ss_dssp GHHHHHHHTTSSCHHHHHHHHHHHHHHHTT--SCHHHHHHTHHHHHHHHHTCSSHHHHHHHGGGHHHHTTTSCHH----H
T ss_pred HHHHHHHHHhCchHHHHHHHHHHHHHHHHH--CCHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHhcCHH----H
Confidence 999998888899999999999999999875 3332 34566656667889999999999998877665532 3
Q ss_pred hhhHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhCchHHHHHHHhccHHHHHHHHHHHhcCCCCCCCCCCCccccCCCCC
Q 000156 443 HKDYVPICMECLNDGTPEVRDAAFSVLAAIAKSVGMRPLERSIEKLDDVRRNKLSEMIAGSGGDVATGTSSARVQTSGGS 522 (2015)
Q Consensus 443 l~~l~p~l~k~L~Ds~~~VR~aA~~al~~l~~~~Ge~~~~~~l~~Ld~~~~kkI~e~~~~~~~~~~~~~~~~~~~~~~~s 522 (2015)
.+.++|.+..++.|.++.||.+|.++++.+...+|.+.. ...+-+
T Consensus 162 ~~~l~~~l~~l~~d~~~~VR~~a~~~l~~l~~~~~~~~~---~~~l~~-------------------------------- 206 (588)
T 1b3u_A 162 KAELRQYFRNLCSDDTPMVRRAAASKLGEFAKVLELDNV---KSEIIP-------------------------------- 206 (588)
T ss_dssp HHHHHHHHHHHHTCSCHHHHHHHHHHHHHHHHTSCHHHH---HHTHHH--------------------------------
T ss_pred HHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHhcHHhH---HHHHHH--------------------------------
Confidence 478899999999999999999999999999988885321 111111
Q ss_pred CCCCCCCcccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcCCCCCCCCCCCCCCCCCHHHHHHHhhccC
Q 000156 523 VPSVEASESSFVRKSAASMLSGKRPVSAAPASKKGGPVKPSAKKDGSGKQETSKLTEAPEDVEPSEMSLEEIESRLGSLI 602 (2015)
Q Consensus 523 ~~~~~~~~~~~~~~~~~s~~~~~~P~~~~~~~~k~~~~k~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~ee~e~~~~~ll 602 (2015)
T Consensus 207 -------------------------------------------------------------------------------- 206 (588)
T 1b3u_A 207 -------------------------------------------------------------------------------- 206 (588)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cHHHHhhhccCCHHHHHHHHHHHHHHHHhccccchHHHHHHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHcCCCchhHH
Q 000156 603 PADTVGQLKSAVWKERLEAISSLRQQVEAVQNLDQSVEILVRLVCMLPGWSEKNVQVQQQVIEVINYLAATATKFPKKCV 682 (2015)
Q Consensus 603 ~~~l~~~L~s~~Wk~Rl~a~e~L~~~v~~~~~~~~~~~~Lv~~L~~~pg~~DsN~qV~~~~Le~l~~l~~~~~~~~~~~~ 682 (2015)
.+...+.+.+|..|..|++.|..+....++. ...+.++..+.. ...|.+..|+..+++++..++...+. ....
T Consensus 207 --~l~~~~~d~~~~vr~~a~~~l~~l~~~~~~~-~~~~~~~~~l~~--~~~d~~~~vR~~a~~~l~~l~~~~~~--~~~~ 279 (588)
T 1b3u_A 207 --MFSNLASDEQDSVRLLAVEACVNIAQLLPQE-DLEALVMPTLRQ--AAEDKSWRVRYMVADKFTELQKAVGP--EITK 279 (588)
T ss_dssp --HHHHHHTCSCHHHHTTHHHHHHHHHHHSCHH-HHHHHTHHHHHH--HHTCSSHHHHHHHHHTHHHHHHHHCH--HHHH
T ss_pred --HHHHHhcCCcHHHHHHHHHHHHHHHHhCCHH-HHHHHHHHHHHH--HccCCCHHHHHHHHHHHHHHHHHhCc--ccch
Confidence 1112223333444444444444333321110 001111111110 11334444444444444444433211 0112
Q ss_pred HHHHHHHHhhhcc--hhhhHHHHHHHHHHHhhhChh----H----HHHHHHHHhhhCCChhHHHHHHHHHHHHHHHhCCC
Q 000156 683 VLCLLGISERVAD--IKTRAHAMKCLTTFSEAVGPG----F----IFERLYKIMKDHKNPKVLSEGILWMVSAVEDFGVS 752 (2015)
Q Consensus 683 ~~il~~LveKlgD--~K~r~~a~~~L~~l~e~~~~~----~----Vl~~L~~~l~~~KnpKv~~~~l~~L~~li~~fG~~ 752 (2015)
..+++.++.-+.| ..+|..+..+|..+++..+.+ . +++.+... ..+++|+||..++.+|..+...+|..
T Consensus 280 ~~l~~~l~~~l~d~~~~vr~~a~~~l~~~~~~~~~~~~~~~~~~~l~p~l~~~-l~d~~~~vR~~a~~~l~~l~~~~~~~ 358 (588)
T 1b3u_A 280 TDLVPAFQNLMKDCEAEVRAAASHKVKEFCENLSADCRENVIMSQILPCIKEL-VSDANQHVKSALASVIMGLSPILGKD 358 (588)
T ss_dssp HTHHHHHHHHHTCSSHHHHHHHHHHHHHHHHTSCTTTHHHHHHHTHHHHHHHH-HTCSCHHHHHHHHTTGGGGHHHHCHH
T ss_pred hHHHHHHHHHhCCCcHHHHHHHHHHHHHHHHHhChhhhhhHHHHHHHHHHHHH-hcCCCHHHHHHHHHHHHHHHHHhhHh
Confidence 2344555544444 346777777777777766543 2 33333333 36889999999999999988877753
Q ss_pred CCChhhHHHHHHhcCCCCCchhHHHHHHHHHHHHHHHhChhHHhhhhhccHHHHHHHHHHHhcCCCCCCCCCcccccCcc
Q 000156 753 HLKLKDLIDFCKDTGLQSSAAATRNATIKLLGALHKFVGPDIKGFLADVKPALLSALDAEYEKNPFEGTVVPKKTVRASE 832 (2015)
Q Consensus 753 ~l~~k~li~~l~~~gL~~sn~~VR~aA~~ll~~Ly~~~G~~l~~~L~~lkp~ll~~Le~ef~k~~~~~~p~p~R~~r~~~ 832 (2015)
. ....+++.+..+ +.+.++.||.+|...++.+....|... +..
T Consensus 359 ~-~~~~l~p~l~~~-l~d~~~~Vr~~a~~~l~~l~~~~~~~~--~~~--------------------------------- 401 (588)
T 1b3u_A 359 N-TIEHLLPLFLAQ-LKDECPEVRLNIISNLDCVNEVIGIRQ--LSQ--------------------------------- 401 (588)
T ss_dssp H-HHHHTHHHHHHH-HTCSCHHHHHHHHTTCHHHHHHSCHHH--HHH---------------------------------
T ss_pred H-HHHHHHHHHHHH-hCCCchHHHHHHHHHHHHHHHhcCHHH--HHH---------------------------------
Confidence 2 134567777777 899999999999999998887776421 000
Q ss_pred ccCCCCCCCCCCCCCcccccccchHHHHhcCCCChHHHHHHHHHHHHHHHhccccCCCCChhhHHHHHHhccccchHHHH
Q 000156 833 STSSVSSGGSDGLPREDISGKFTPTLVKSLESPDWKVRLESIEAVNKILEEANKRIQPAGTGELFGGLRGRLYDSNKNLV 912 (2015)
Q Consensus 833 ~~~s~~~~~~d~lprvdIs~~L~~~ll~~l~d~~Wk~R~eale~L~~ll~~a~~~I~~~~~~eL~~~L~~rL~DsN~~V~ 912 (2015)
.+.+.+...+.|.+|++|..+++.+..+....+.... ...+++.|...+.|.+..|+
T Consensus 402 --------------------~~lp~l~~~~~d~~~~vr~~~~~~l~~l~~~~~~~~~---~~~l~~~l~~~l~d~~~~Vr 458 (588)
T 1b3u_A 402 --------------------SLLPAIVELAEDAKWRVRLAIIEYMPLLAGQLGVEFF---DEKLNSLCMAWLVDHVYAIR 458 (588)
T ss_dssp --------------------HHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHHCGGGC---CHHHHHHHHHGGGCSSHHHH
T ss_pred --------------------HHHHHHHHHhcCCCchHHHHHHHHHHHHHHHcCHHHH---HHHHHHHHHHHhcCCcHHHH
Confidence 0233455566788999999999999998874332211 25788999999999999999
Q ss_pred HHHHHHHHHHHHHhChhhHHhhhHHHHHHHHHhCCCcHHHHHHHHHHHHHHHHhcCc----hhhHHHHHHHHhcCCCChh
Q 000156 913 MATLITLGAVASAMGPAVEKSSKGVLSDILKCLGDNKKHMRECTLTVLDAWLAAVHL----DKMVPYVTTALTDAKLGAE 988 (2015)
Q Consensus 913 ~~Al~~l~~La~alg~~f~~~~~~llp~ll~~L~D~k~~Vr~aa~~aL~~i~~~~gl----~~ll~~l~~~L~~~k~~p~ 988 (2015)
..|+.+++.++..+|..+ +...++|.+...+.|.+..+|.++..++..++..+|. ..++|.+...+.++ ++.
T Consensus 459 ~~a~~~l~~l~~~~~~~~--~~~~llp~l~~~~~~~~~~~R~~a~~~l~~l~~~~~~~~~~~~~~~~l~~~l~d~--~~~ 534 (588)
T 1b3u_A 459 EAATSNLKKLVEKFGKEW--AHATIIPKVLAMSGDPNYLHRMTTLFCINVLSEVCGQDITTKHMLPTVLRMAGDP--VAN 534 (588)
T ss_dssp HHHHHHHHHHHHHHCHHH--HHHHTHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHGGGCS--CHH
T ss_pred HHHHHHHHHHHHHhCchh--HHHHHHHHHHHHhhCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhhCCCC--Cch
Confidence 999999999999999875 4678899999999999999999999999999998874 45667777777766 589
Q ss_pred HHHHHHHHHHHHhccCCCCCChhhhHHH-HHhhcCCCChHHHHHHHHHHHHH
Q 000156 989 GRKDLFDWLSKQLTGLSGFPDAAHLLKP-ASIAMTDKSSDVRKAAEACIVEI 1039 (2015)
Q Consensus 989 ~R~~~l~~L~~~l~~~~~~~~~~~ll~p-l~~~L~D~~~~VR~aA~~~L~~l 1039 (2015)
+|..++..+.......+.. .....+.| +...++|.+.+||.+|..++..+
T Consensus 535 Vr~~a~~~l~~l~~~~~~~-~~~~~~~p~l~~l~~d~d~~vr~~a~~al~~l 585 (588)
T 1b3u_A 535 VRFNVAKSLQKIGPILDNS-TLQSEVKPILEKLTQDQDVDVKYFAQEALTVL 585 (588)
T ss_dssp HHHHHHHHHHHHGGGSCHH-HHHHHHHHHHHHHTTCSSHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHhchh-hhHHHHHHHHHHHcCCCchhHHHHHHHHHHHh
Confidence 9999999998877655431 12234445 66677999999999999998764
No 11
>2qk1_A Protein STU2; STU2P, XMAP215, DIS1, TOG, CH-TOG, heat repeat, microtubule plus END, +TIP, protein binding; 1.70A {Saccharomyces cerevisiae}
Probab=99.93 E-value=8.4e-25 Score=256.92 Aligned_cols=227 Identities=15% Similarity=0.186 Sum_probs=209.9
Q ss_pred CCCCCCCcccccccchHHHHhcCCCChHHHHHHHHHHHH-HHHhccccCC--CCChhhHHHHHHhcc-ccchHHHHHHHH
Q 000156 841 GSDGLPREDISGKFTPTLVKSLESPDWKVRLESIEAVNK-ILEEANKRIQ--PAGTGELFGGLRGRL-YDSNKNLVMATL 916 (2015)
Q Consensus 841 ~~d~lprvdIs~~L~~~ll~~l~d~~Wk~R~eale~L~~-ll~~a~~~I~--~~~~~eL~~~L~~rL-~DsN~~V~~~Al 916 (2015)
.+|+++++||.++|+++|.+.+.+++|++|++|++.|.. ++++ ++++. ...|++++..|++.+ +|+|..|+..|+
T Consensus 4 ~~d~~~~~~i~~kl~~~f~~~l~s~~w~eRk~al~~L~~~~~~~-~~~i~~~~~~~~~~~~~L~~~l~~D~n~~v~~~A~ 82 (249)
T 2qk1_A 4 MASMLPEETILDKLPKDFQERITSSKWKDRVEALEEFWDSVLSQ-TKKLKSTSQNYSNLLGIYGHIIQKDANIQAVALAA 82 (249)
T ss_dssp SCCCCCCBCCGGGSCTTHHHHHTCSSHHHHHHHHHHHHHHTGGG-CCCBCCTTCCCHHHHHHHHHHHHHCSCHHHHHHHH
T ss_pred hHhhcChhhhhhhCChhHHHHhhcCCHHHHHHHHHHHHHHHHhc-CCccccCcccHHHHHHHHHHHhccCCCHHHHHHHH
Confidence 478999999999999999999999999999999999999 8875 46776 456799999999999 899999999999
Q ss_pred HHHHHHHHHhC-hhhH-HhhhHHHHHHHHHhCCCcHHHHHHHHHHHHHHHHhc------C-chhhHHHHHHHHhcCCCCh
Q 000156 917 ITLGAVASAMG-PAVE-KSSKGVLSDILKCLGDNKKHMRECTLTVLDAWLAAV------H-LDKMVPYVTTALTDAKLGA 987 (2015)
Q Consensus 917 ~~l~~La~alg-~~f~-~~~~~llp~ll~~L~D~k~~Vr~aa~~aL~~i~~~~------g-l~~ll~~l~~~L~~~k~~p 987 (2015)
++++.|+..++ +.|. +|...++|.++.+++|+++.|++++..||++++.++ + ++.+++.+...|+++ +|
T Consensus 83 ~al~~la~~l~~~~f~~~y~~~llp~ll~~l~dkk~~V~~aa~~al~~i~~~~~~~~~~~~l~~ll~~l~~~l~~k--~~ 160 (249)
T 2qk1_A 83 QSVELICDKLKTPGFSKDYVSLVFTPLLDRTKEKKPSVIEAIRKALLTICKYYDPLASSGRNEDMLKDILEHMKHK--TP 160 (249)
T ss_dssp HHHHHHHHHHCTTTSCHHHHHHHHHHHHHGGGCCCHHHHHHHHHHHHHHHHHSCTTCTTCTTHHHHHHHHHHTTCS--SH
T ss_pred HHHHHHHHhcccccccHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHccccccCCcHHHHHHHHHHHHcCC--Ch
Confidence 99999999999 9999 999999999999999999999999999999999999 7 889999999999987 68
Q ss_pred hHHHHHHHHHHHHhccCCCC-----CCh-hhhHHHHHhhcCCCChHHHHHHHHHHHHHHHHcChhHHHHHhccCChHHHH
Q 000156 988 EGRKDLFDWLSKQLTGLSGF-----PDA-AHLLKPASIAMTDKSSDVRKAAEACIVEILRAGGQETIEKNLKDIQGPALA 1061 (2015)
Q Consensus 988 ~~R~~~l~~L~~~l~~~~~~-----~~~-~~ll~pl~~~L~D~~~~VR~aA~~~L~~l~~~~G~~~~~~~l~~L~~~~~~ 1061 (2015)
.+|.+++.||...+...+.. +.+ ..+++.+..+|+|.+++||.+|.+|++.++.++|++.|.+++..|++.+++
T Consensus 161 ~vk~~al~~l~~~~~~~~~~~~~l~~~l~~~iip~l~~~l~D~~~~VR~aA~~~l~~i~~~vG~~~~~p~l~~Ld~~k~~ 240 (249)
T 2qk1_A 161 QIRMECTQLFNASMKEEKDGYSTLQRYLKDEVVPIVIQIVNDTQPAIRTIGFESFAILIKIFGMNTFVKTLEHLDNLKRK 240 (249)
T ss_dssp HHHHHHHHHHHHHHHHCCSCSHHHHHHHTTTHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHHCSGGGHHHHHHSCHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCcchhHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHhHHHHH
Confidence 99999999999999877642 234 667777999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhc
Q 000156 1062 LILERIKLN 1070 (2015)
Q Consensus 1062 ~i~~~l~k~ 1070 (2015)
+|+++++++
T Consensus 241 ki~~~~~~~ 249 (249)
T 2qk1_A 241 KIEETVKTL 249 (249)
T ss_dssp HHHHHHHC-
T ss_pred HHHHHHhcC
Confidence 999999863
No 12
>2bpt_A Importin beta-1 subunit; nuclear transport, nucleocytoplasmic transport, nuclear trafficking, importin- beta, complex; 1.99A {Saccharomyces cerevisiae} SCOP: a.118.1.1 PDB: 2bku_B 3ea5_B* 3nd2_A
Probab=99.92 E-value=8.8e-21 Score=262.23 Aligned_cols=702 Identities=13% Similarity=0.128 Sum_probs=474.1
Q ss_pred hhhcCCChHHHHHHHHHHHHHhhccCCCCchHHHhhhhhhHhhhcCC-cHHHHHHHHHHHHHHHHHhchh---hhhhHHH
Q 000156 18 DRLLHKNWKVRNEANIDLAALCDSITDPKDNRIRELGPLFKKTVADS-NAPVQDKALDALIAYLKAADAD---AGRYAKE 93 (2015)
Q Consensus 18 erl~~k~WK~R~~ayeeL~~~~~~~~d~~~~~~~~~~~~~~k~v~Ds-N~~vqe~~leal~~~l~~~~~~---~~~~~~~ 93 (2015)
+.|.+.+-+.|..+.+-+...+...... ..|..+.+.+...+.+. |+.+.+.++.++..+++..+.. ...+...
T Consensus 102 ~~l~~~~~~vr~~~~~~l~~i~~~~~p~--~~w~~ll~~L~~~l~~~~~~~~r~~al~~l~~l~~~~~~~~~~~~~~~~~ 179 (861)
T 2bpt_A 102 TALVSIEPRIANAAAQLIAAIADIELPH--GAWPELMKIMVDNTGAEQPENVKRASLLALGYMCESADPQSQALVSSSNN 179 (861)
T ss_dssp HHHTCSSHHHHHHHHHHHHHHHHHHGGG--TCCHHHHHHHHHHTSTTSCHHHHHHHHHHHHHHHHTSSTTSSTTGGGHHH
T ss_pred HHHCCCchHHHHHHHHHHHHHHHhhCcc--cccHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHcCChhhhHHHHHHHH
Confidence 3466777788888887777766542110 13445566667778888 9999999999999998875543 2345667
Q ss_pred HHHHHHHhhcC-C--ChhHHHHHHHHHHHHHhh-h-h------hhhHHHHHHHHhhcCChhhHHHHHHHHHHHHHHhCCC
Q 000156 94 VCDAIAAKCLT-G--RPKTVEKAQAVFMLWVEL-E-A------VDVFLDVMEKAIKNKVAKAVVPAIDVMFQALSEFGAK 162 (2015)
Q Consensus 94 v~~~LieK~l~-~--k~~~k~~a~~~ll~~~E~-~-~------~~~v~~~L~~~~~~KnpKv~~~~l~~L~~~l~~fG~~ 162 (2015)
+++.++.- +. . .+.+|..|.+++..+++. . . ...+++.|...+.+.+++++..++.+|..++..++..
T Consensus 180 ll~~l~~~-l~~~~~~~~vr~~al~~l~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~~~~r~~a~~~l~~l~~~~~~~ 258 (861)
T 2bpt_A 180 ILIAIVQG-AQSTETSKAVRLAALNALADSLIFIKNNMEREGERNYLMQVVCEATQAEDIEVQAAAFGCLCKIMSKYYTF 258 (861)
T ss_dssp HHHHHHHH-HSTTCCCHHHHHHHHHHHHHHGGGCHHHHTSHHHHHHHHHHHHHHHTCSCHHHHHHHHHHHHHHHHHHGGG
T ss_pred HHHHHHHh-hcCCCCCHHHHHHHHHHHHHHHHHHHHHccChhHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 77777654 44 3 678999999998876543 1 1 1346777777788899999999999999999998764
Q ss_pred CcC-hh-HHHhhhhhhhcCCChhHHHHHHHHHHHHHHHhCCchhhHHHhhhChHHHHHHHHHHHHhcCCCCCCCc---cc
Q 000156 163 IIP-PK-RILKMLPELFDHQDQNVRASSKGLTLELCRWIGKDPVKTILFEKMRDTMKKELEVELVNVSGTARPTR---KI 237 (2015)
Q Consensus 163 ~i~-~k-~il~~l~~ll~~~d~~VR~~a~~l~~ely~~lG~~~l~~~l~~~Lk~~q~keLe~~f~k~~~~~~P~R---~~ 237 (2015)
..+ +. .+++.+...+.+.+..||..|..++..+...... + . .+. . +. + ..|.+ ++
T Consensus 259 ~~~~l~~~l~~~~~~~~~~~~~~vr~~a~~~l~~l~~~~~~--~-~-~~~-----------~--~~--~-~~~~~~~~~~ 318 (861)
T 2bpt_A 259 MKPYMEQALYALTIATMKSPNDKVASMTVEFWSTICEEEID--I-A-YEL-----------A--QF--P-QSPLQSYNFA 318 (861)
T ss_dssp CHHHHHHTHHHHHHHHTTCSSHHHHHHHHHHHHHHHHHHHH--H-H-HHH-----------H--HC--T-TCSCCCCCHH
T ss_pred HHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHh--h-h-hhh-----------h--hc--c-CCchhhHHHH
Confidence 322 34 6777777888999999999999988777765421 0 0 000 0 00 0 01111 00
Q ss_pred hhhhhHhhhhhccccCCCCCCCCCCCCCCCCCCCCCCCCCcccccccCcchhhhhhhccCChHHHHHHHHHHHHHhcCCC
Q 000156 238 RAEQDKELGQELISEDVGPGPSEESTADVPPEIDEYELVDPVDILTPLEKSGFWEGVKATKWSERKDAVAELTKLASTKR 317 (2015)
Q Consensus 238 rs~~~~~~~~ea~~~~~~~~~~~~~~~~~~~~iD~~dl~~~vdIl~kl~~~~f~~~l~s~kWkeR~eaL~~L~~l~~~~k 317 (2015)
+..-. ..- ..--..-... ++ | ..+.+|..|+.+...|..++..-
T Consensus 319 ~~~~~-~il-~~ll~~l~~~---------~~--d----------------------~~d~~~~~r~~a~~~L~~l~~~~- 362 (861)
T 2bpt_A 319 LSSIK-DVV-PNLLNLLTRQ---------NE--D----------------------PEDDDWNVSMSAGACLQLFAQNC- 362 (861)
T ss_dssp HHHHH-HHH-HHHHHHTTCC---------CC--C-----------------------CCCCCHHHHHHHHHHHHHHHHH-
T ss_pred HHHHH-HHH-HHHHHHHHhc---------cc--c----------------------cccccCcHHHHHHHHHHHHHHHc-
Confidence 00000 000 0000000000 00 0 01245899999999998877421
Q ss_pred CCCCChHHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHhh-hcchhhhHhHHHHHHHHhccCcHHHHHHHHHHHHHHHHh
Q 000156 318 IAPGDFTEVCRTLKKLITDVNIAVAVEAIQAIGNLARGLR-THFSGSSRFLLPVLLEKLKEKKPTVAESLTQTLQAMHKA 396 (2015)
Q Consensus 318 i~~~~y~~l~~~L~k~l~D~N~~V~~~A~~~l~~La~~L~-~~f~~~~~~llp~LL~klkdkk~~V~~aa~~aL~al~~~ 396 (2015)
....+..+++.+...+.|.+..++..|+.+++.++.+.+ ..+.+|...++|.++..++|.++.||.++..++..+...
T Consensus 363 -~~~~~~~l~~~l~~~l~~~~~~~r~~a~~~l~~i~~~~~~~~~~~~l~~il~~l~~~l~d~~~~vr~~a~~~l~~l~~~ 441 (861)
T 2bpt_A 363 -GNHILEPVLEFVEQNITADNWRNREAAVMAFGSIMDGPDKVQRTYYVHQALPSILNLMNDQSLQVKETTAWCIGRIADS 441 (861)
T ss_dssp -GGGGHHHHHHHHHHHTTCSSHHHHHHHHHHHHHTSSSSCHHHHHHHHHHHHHHHHHGGGCSCHHHHHHHHHHHHHHHHH
T ss_pred -cHhHHHHHHHHHHHHcCCCChhHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHH
Confidence 122356788899999999999999999999999998876 678899999999999999999999999999999888865
Q ss_pred -c-----CCChHhHHHHHHHHhhcCChHHHHHHHHHHHHHHHhcC---hhHHHHhhhhHHHHHHHHhc--CCCHHHHHHH
Q 000156 397 -G-----CLNLVDVVEDVKTSVKNKVPLVRSLTLNWVTFCIETSS---KAAVLKVHKDYVPICMECLN--DGTPEVRDAA 465 (2015)
Q Consensus 397 -~-----~~~l~~il~~l~~~L~~Knp~vR~~~l~~L~~~l~~~~---~~~l~~~l~~l~p~l~k~L~--Ds~~~VR~aA 465 (2015)
+ ...+..+++.+..++++. +.+|..++..|..+.+... +..+.++++.+++.+.+++. |.++.||.++
T Consensus 442 ~~~~~~~~~~~~~~l~~l~~~l~~~-~~v~~~a~~al~~l~~~~~~~~~~~l~~~~~~il~~L~~~l~~~d~~~~vr~~a 520 (861)
T 2bpt_A 442 VAESIDPQQHLPGVVQACLIGLQDH-PKVATNCSWTIINLVEQLAEATPSPIYNFYPALVDGLIGAANRIDNEFNARASA 520 (861)
T ss_dssp HGGGSCTTTTHHHHHHHHHHHHTSC-HHHHHHHHHHHHHHHHHHSSSSSCGGGGGHHHHHHHHHHHHTCSCCGGGHHHHH
T ss_pred hhhhcCCHHHHHHHHHHHHHHhccC-hHHHHHHHHHHHHHHHhcccccchhhHHHHHHHHHHHHHHHhCcCcchHHHHHH
Confidence 1 134778899999999876 9999999999998887654 34566788999999999998 5558999999
Q ss_pred HHHHHHHHHHhCchHHHHHHHhccHHHHHHHHHHHhcCCCCCCCCCCCccccCCCCCCCCCCCCcccccccccccccCCC
Q 000156 466 FSVLAAIAKSVGMRPLERSIEKLDDVRRNKLSEMIAGSGGDVATGTSSARVQTSGGSVPSVEASESSFVRKSAASMLSGK 545 (2015)
Q Consensus 466 ~~al~~l~~~~Ge~~~~~~l~~Ld~~~~kkI~e~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~s~~~~~ 545 (2015)
.++++.+....|+. +.+++..+-+.-.+.+.+.+.-. .
T Consensus 521 ~~al~~l~~~~~~~-~~~~~~~l~~~l~~~l~~~~~~~---------------------------------------~-- 558 (861)
T 2bpt_A 521 FSALTTMVEYATDT-VAETSASISTFVMDKLGQTMSVD---------------------------------------E-- 558 (861)
T ss_dssp HHHHHHHHHHCCGG-GHHHHHHHHHHHHHHHHHHTTSC---------------------------------------G--
T ss_pred HHHHHHHHHHcchh-hHHHHHHHHHHHHHHHHHHHhhh---------------------------------------c--
Confidence 99999999999975 66777766554444443321000 0
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCcCCCCCCCCCCCCCCCCCHHHHHHHhhccCcHHHHhhhccCCHHHHHHHHHHH
Q 000156 546 RPVSAAPASKKGGPVKPSAKKDGSGKQETSKLTEAPEDVEPSEMSLEEIESRLGSLIPADTVGQLKSAVWKERLEAISSL 625 (2015)
Q Consensus 546 ~P~~~~~~~~k~~~~k~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~ee~e~~~~~ll~~~l~~~L~s~~Wk~Rl~a~e~L 625 (2015)
...+.++-+ .....|..+++.|
T Consensus 559 -----------------------------------------~i~~~~~~~-----------------~~~~~~~~~~~~l 580 (861)
T 2bpt_A 559 -----------------------------------------NQLTLEDAQ-----------------SLQELQSNILTVL 580 (861)
T ss_dssp -----------------------------------------GGCCHHHHH-----------------HHHHHHHHHHHHH
T ss_pred -----------------------------------------ccCChhhHH-----------------HHHHHHHHHHHHH
Confidence 000100000 0011234444444
Q ss_pred HHHHHhccccchHHHHHHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHhhhcc--h-hhhHHH
Q 000156 626 RQQVEAVQNLDQSVEILVRLVCMLPGWSEKNVQVQQQVIEVINYLAATATKFPKKCVVLCLLGISERVAD--I-KTRAHA 702 (2015)
Q Consensus 626 ~~~v~~~~~~~~~~~~Lv~~L~~~pg~~DsN~qV~~~~Le~l~~l~~~~~~~~~~~~~~il~~LveKlgD--~-K~r~~a 702 (2015)
..++...+. -....+..+++.++.-+.+ . .+|..+
T Consensus 581 ~~l~~~~~~------------------------------------------~~~~~~~~l~~~l~~~l~~~~~~~v~~~~ 618 (861)
T 2bpt_A 581 AAVIRKSPS------------------------------------------SVEPVADMLMGLFFRLLEKKDSAFIEDDV 618 (861)
T ss_dssp HHHHHHCGG------------------------------------------GTGGGHHHHHHHHHHHHHSTTGGGTHHHH
T ss_pred HHHHHHhhh------------------------------------------hhHHHHHHHHHHHHHHHccCCCCcHHHHH
Confidence 444433221 0111222333333333222 2 456667
Q ss_pred HHHHHHHHhhhChhH------HHHHHHHHhhhCCChhHHHHHHHHHHHHHHHhCCCCC-ChhhHHHHHHhcCCCCCc--h
Q 000156 703 MKCLTTFSEAVGPGF------IFERLYKIMKDHKNPKVLSEGILWMVSAVEDFGVSHL-KLKDLIDFCKDTGLQSSA--A 773 (2015)
Q Consensus 703 ~~~L~~l~e~~~~~~------Vl~~L~~~l~~~KnpKv~~~~l~~L~~li~~fG~~~l-~~k~li~~l~~~gL~~sn--~ 773 (2015)
..++..++...+.++ +++.++..+ .++++.++..++..+..++..+|.... .+..+++.+... +.+.+ +
T Consensus 619 ~~~l~~l~~~~~~~~~~~l~~i~~~l~~~l-~~~~~~vr~~a~~~l~~l~~~~~~~~~~~~~~l~~~l~~~-l~~~~~~~ 696 (861)
T 2bpt_A 619 FYAISALAASLGKGFEKYLETFSPYLLKAL-NQVDSPVSITAVGFIADISNSLEEDFRRYSDAMMNVLAQM-ISNPNARR 696 (861)
T ss_dssp HHHHHHHHHHHGGGGHHHHHHHHHHHHHHH-HCTTSHHHHHHHHHHHHHHHHTGGGGHHHHHHHHHHHHHH-HHCTTCCT
T ss_pred HHHHHHHHHHHhhhHHHHHHHHHHHHHHHh-ccccHHHHHHHHHHHHHHHHHhchhccchHHHHHHHHHHH-hCCccccH
Confidence 777777776655433 344444454 678999999999999999988874211 134566666665 77665 8
Q ss_pred hHHHHHHHHHHHHHHHhChhHHhhhhhccHHHHHHHHHHHhcCCCCCCCCCcccccCccccCCCCCCCCCCCCCcccccc
Q 000156 774 ATRNATIKLLGALHKFVGPDIKGFLADVKPALLSALDAEYEKNPFEGTVVPKKTVRASESTSSVSSGGSDGLPREDISGK 853 (2015)
Q Consensus 774 ~VR~aA~~ll~~Ly~~~G~~l~~~L~~lkp~ll~~Le~ef~k~~~~~~p~p~R~~r~~~~~~s~~~~~~d~lprvdIs~~ 853 (2015)
.||..+..+++.|....|+.+.+|+..+-|.++..++. .. ++ .
T Consensus 697 ~vr~~~~~~l~~l~~~~~~~~~~~l~~~l~~l~~~~~~-----~~-~~--------------------~----------- 739 (861)
T 2bpt_A 697 ELKPAVLSVFGDIASNIGADFIPYLNDIMALCVAAQNT-----KP-EN--------------------G----------- 739 (861)
T ss_dssp THHHHHHHHHHHHHHHHGGGGHHHHHHHHHHHHHHHTC-----CC-SS--------------------S-----------
T ss_pred hhhHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhc-----CC-CC--------------------C-----------
Confidence 99999999999999999999999998888777665421 00 00 0
Q ss_pred cchHHHHhcCCCChHHHHHHHHHHHHHHHhcc---ccCCCCChhhHHHHHHhccccc----hHHHHHHHHHHHHHHHHHh
Q 000156 854 FTPTLVKSLESPDWKVRLESIEAVNKILEEAN---KRIQPAGTGELFGGLRGRLYDS----NKNLVMATLITLGAVASAM 926 (2015)
Q Consensus 854 L~~~ll~~l~d~~Wk~R~eale~L~~ll~~a~---~~I~~~~~~eL~~~L~~rL~Ds----N~~V~~~Al~~l~~La~al 926 (2015)
.++.. +..+.+|..+++.+..++...+ ..+.+. ..+++..|...+.|. +..|+..|+.+++.|+..+
T Consensus 740 -d~d~~----~~~~~vr~~~l~~~~~i~~~l~~~~~~~~~~-~~~i~~~l~~~~~d~~~~~~~~vr~~a~~~l~~l~~~~ 813 (861)
T 2bpt_A 740 -TLEAL----DYQIKVLEAVLDAYVGIVAGLHDKPEALFPY-VGTIFQFIAQVAEDPQLYSEDATSRAAVGLIGDIAAMF 813 (861)
T ss_dssp -SHHHH----HHHHHHHHHHHHHHHHHHHHTTTCHHHHGGG-HHHHHHHHHHHHHCHHHHTSHHHHHHHHHHHHHHHHHC
T ss_pred -ChHHH----HHHHHHHHHHHHHHHHHHHHHccCHHHHHHH-HHHHHHHHHHHHcCcccCCcHHHHHHHHHHHHHHHHHc
Confidence 00100 1136789999999999997543 223333 377888888888885 8899999999999999999
Q ss_pred -ChhhHHhhh-HHHHHHHHHhC---CCcHHHHHHHHHHHHHHHHhc
Q 000156 927 -GPAVEKSSK-GVLSDILKCLG---DNKKHMRECTLTVLDAWLAAV 967 (2015)
Q Consensus 927 -g~~f~~~~~-~llp~ll~~L~---D~k~~Vr~aa~~aL~~i~~~~ 967 (2015)
|+.|.+|.. .++|.+++.+. +....+++.|.=+++.+.+.+
T Consensus 814 ~g~~~~~~~~~~~~~~ll~~l~~~~~~~~~~~~~~~wa~~~~~~~~ 859 (861)
T 2bpt_A 814 PDGSIKQFYGQDWVIDYIKRTRSGQLFSQATKDTARWAREQQKRQL 859 (861)
T ss_dssp TTSTTGGGTTCHHHHHHHHHHHHCSSSCHHHHHHHHHHHHHHHHHH
T ss_pred CCchHHHHHhcHHHHHHHHHHhhccCCCHHHHHHHHHHHHHHHHHh
Confidence 999999999 99999999887 455678888888887776544
No 13
>1qgr_A Protein (importin beta subunit); transport receptor, nuclear import, heat motif, NLS-binding; 2.30A {Homo sapiens} SCOP: a.118.1.1 PDB: 1qgk_A 2p8q_A 2q5d_A 3lww_A 1ukl_A 2qna_A
Probab=99.92 E-value=1.5e-20 Score=260.39 Aligned_cols=722 Identities=12% Similarity=0.077 Sum_probs=483.4
Q ss_pred hcCCcHHHHHHHHHHHHHHHHHhchhhhhhHHHHHHHHHHhhcC--CChhHHHHHHHHHHHHH----------------h
Q 000156 61 VADSNAPVQDKALDALIAYLKAADADAGRYAKEVCDAIAAKCLT--GRPKTVEKAQAVFMLWV----------------E 122 (2015)
Q Consensus 61 v~DsN~~vqe~~leal~~~l~~~~~~~~~~~~~v~~~LieK~l~--~k~~~k~~a~~~ll~~~----------------E 122 (2015)
+.+.+..++..|.+.|..|-+.. ...++..|+.-..+ ..+.+|..|..++-.++ +
T Consensus 10 ~~s~d~~~r~~A~~~L~~~~~~~-------~~~~~~~L~~~l~~~~~~~~vR~~a~~~Lk~~i~~~~~~~~~~~~~~w~~ 82 (876)
T 1qgr_A 10 TVSPDRLELEAAQKFLERAAVEN-------LPTFLVELSRVLANPGNSQVARVAAGLQIKNSLTSKDPDIKAQYQQRWLA 82 (876)
T ss_dssp GGCSCHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHCTTSCHHHHHHHHHHHHHHHCCSSHHHHHHHHHHHHT
T ss_pred hcCCCHHHHHHHHHHHHHHHhcC-------hhhHHHHHHHHHhCCCCCHHHHHHHHHHHHHhccccchHhHHHHHhhhcc
Confidence 34556677777777776654321 12233333333222 24667777655544332 1
Q ss_pred hh--hhhhHHHHHHHHhhcCChhhHHHHHHHHHHHHHHhCCCCcChhHHHhhhhhhhcCC--ChhHHHHHHHHHHHHHHH
Q 000156 123 LE--AVDVFLDVMEKAIKNKVAKAVVPAIDVMFQALSEFGAKIIPPKRILKMLPELFDHQ--DQNVRASSKGLTLELCRW 198 (2015)
Q Consensus 123 ~~--~~~~v~~~L~~~~~~KnpKv~~~~l~~L~~~l~~fG~~~i~~k~il~~l~~ll~~~--d~~VR~~a~~l~~ely~~ 198 (2015)
+. .-..+-+.|+.++.+-++++ ..+..++..+....++. -....+++.+..++.+. +..+|..+..++..+..+
T Consensus 83 l~~~~~~~ik~~ll~~l~~~~~~~-~~~~~~l~~i~~~~~~~-~~w~~ll~~l~~~l~~~~~~~~~r~~al~~l~~l~~~ 160 (876)
T 1qgr_A 83 IDANARREVKNYVLHTLGTETYRP-SSASQCVAGIACAEIPV-NQWPELIPQLVANVTNPNSTEHMKESTLEAIGYICQD 160 (876)
T ss_dssp SCHHHHHHHHHHHHHHTTTCCSSS-CHHHHHHHHHHHHHGGG-TCCTTHHHHHHHHHHCTTCCHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHhCCCcHHH-HHHHHHHHHHHHhhCcc-cccHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHh
Confidence 21 12355566788888888898 88999998888776541 13457899999999999 999999999998888877
Q ss_pred hCCchhhHHHhhhChHHHHHHHHHHHHhcCCCCCCCccchhhhhHhhhhhccccCCCCCCCCCCCCCCCCCCCCCCCCCc
Q 000156 199 IGKDPVKTILFEKMRDTMKKELEVELVNVSGTARPTRKIRAEQDKELGQELISEDVGPGPSEESTADVPPEIDEYELVDP 278 (2015)
Q Consensus 199 lG~~~l~~~l~~~Lk~~q~keLe~~f~k~~~~~~P~R~~rs~~~~~~~~ea~~~~~~~~~~~~~~~~~~~~iD~~dl~~~ 278 (2015)
++++.+ ...-+..+.
T Consensus 161 ~~~~~~-----~~~~~~ll~------------------------------------------------------------ 175 (876)
T 1qgr_A 161 IDPEQL-----QDKSNEILT------------------------------------------------------------ 175 (876)
T ss_dssp SCHHHH-----GGGHHHHHH------------------------------------------------------------
T ss_pred cCHhhH-----HhHHHHHHH------------------------------------------------------------
Confidence 643211 110000000
Q ss_pred ccccccCcchhhhhhhccC--ChHHHHHHHHHHHHHhcC--CCCCCCCh-HHHHHHHHHHhcccCHHHHHHHHHHHHHHH
Q 000156 279 VDILTPLEKSGFWEGVKAT--KWSERKDAVAELTKLAST--KRIAPGDF-TEVCRTLKKLITDVNIAVAVEAIQAIGNLA 353 (2015)
Q Consensus 279 vdIl~kl~~~~f~~~l~s~--kWkeR~eaL~~L~~l~~~--~ki~~~~y-~~l~~~L~k~l~D~N~~V~~~A~~~l~~La 353 (2015)
.+...+.+. +|..|..+++.|..++.. ..+....+ ..+++.+...+.|.+..++..|+.|+..++
T Consensus 176 ----------~l~~~l~~~~~~~~vr~~a~~~l~~~~~~~~~~~~~~~~~~~il~~l~~~~~~~~~~vr~~a~~~l~~l~ 245 (876)
T 1qgr_A 176 ----------AIIQGMRKEEPSNNVKLAATNALLNSLEFTKANFDKESERHFIMQVVCEATQCPDTRVRVAALQNLVKIM 245 (876)
T ss_dssp ----------HHHHHHSTTCSCHHHHHHHHHHHHHHGGGCHHHHTSHHHHHHHHHHHHHHTTCSSHHHHHHHHHHHHHHH
T ss_pred ----------HHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHH
Confidence 122222222 567788888888776531 00111001 136777777778888899999999999999
Q ss_pred HHhhhcchhhhH-hHHHHHHHHhccCcHHHHHHHHHHHHHHHHhc--------------------CCC-----hHhHHHH
Q 000156 354 RGLRTHFSGSSR-FLLPVLLEKLKEKKPTVAESLTQTLQAMHKAG--------------------CLN-----LVDVVED 407 (2015)
Q Consensus 354 ~~L~~~f~~~~~-~llp~LL~klkdkk~~V~~aa~~aL~al~~~~--------------------~~~-----l~~il~~ 407 (2015)
....+.|.+|+. .+++.++..+++....|+..+.+++..++... +.. +..+++.
T Consensus 246 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~al~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~ 325 (876)
T 1qgr_A 246 SLYYQYMETYMGPALFAITIEAMKSDIDEVALQGIEFWSNVCDEEMDLAIEASEAAEQGRPPEHTSKFYAKGALQYLVPI 325 (876)
T ss_dssp HHSGGGCHHHHTTTHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCCSSCCCCHHHHHHHHHHHH
T ss_pred HHhHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHhHhhhhccccccCCCccchhHHHHHHHHHHHhHH
Confidence 998888999999 99999999999999999999988888776530 011 2445565
Q ss_pred HHHHhh-------cCChHHHHHHHHHHHHHHHhcChhHHHHhhhhHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhCchH
Q 000156 408 VKTSVK-------NKVPLVRSLTLNWVTFCIETSSKAAVLKVHKDYVPICMECLNDGTPEVRDAAFSVLAAIAKSVGMRP 480 (2015)
Q Consensus 408 l~~~L~-------~Knp~vR~~~l~~L~~~l~~~~~~~l~~~l~~l~p~l~k~L~Ds~~~VR~aA~~al~~l~~~~Ge~~ 480 (2015)
++..+. +.+|.+|..++..|..+....+. ..++.++|.+...+.|.++.||.+|..+++.+....+...
T Consensus 326 ll~~l~~~~~d~~~~~~~~r~~a~~~l~~l~~~~~~----~~~~~~l~~l~~~l~~~~~~~r~~a~~~l~~i~~~~~~~~ 401 (876)
T 1qgr_A 326 LTQTLTKQDENDDDDDWNPCKAAGVCLMLLATCCED----DIVPHVLPFIKEHIKNPDWRYRDAAVMAFGCILEGPEPSQ 401 (876)
T ss_dssp HHHHTTCCCSSCCTTCCCHHHHHHHHHHHHHHHHGG----GGHHHHHHHHHHHTTCSSHHHHHHHHHHHHHTSSSSCHHH
T ss_pred HHHHhhcccccccccccHHHHHHHHHHHHHHHHCcH----hhHHHHHHHHHHHccCCChHHHHHHHHHHHHHHcCCCHHH
Confidence 666553 34678888877777776665442 2346677777778888888888888877766553332111
Q ss_pred HHHHHHhccHHHHHHHHHHHhcCCCCCCCCCCCccccCCCCCCCCCCCCcccccccccccccCCCCCCCCCCCCCCCCCC
Q 000156 481 LERSIEKLDDVRRNKLSEMIAGSGGDVATGTSSARVQTSGGSVPSVEASESSFVRKSAASMLSGKRPVSAAPASKKGGPV 560 (2015)
Q Consensus 481 ~~~~l~~Ld~~~~kkI~e~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~s~~~~~~P~~~~~~~~k~~~~ 560 (2015)
+.+++.
T Consensus 402 ~~~~~~-------------------------------------------------------------------------- 407 (876)
T 1qgr_A 402 LKPLVI-------------------------------------------------------------------------- 407 (876)
T ss_dssp HHHHHH--------------------------------------------------------------------------
T ss_pred HHHHHH--------------------------------------------------------------------------
Confidence 111110
Q ss_pred CCCCCCCCCCCCcCCCCCCCCCCCCCCCCCHHHHHHHhhccCcHHHHhhhccCCHHHHHHHHHHHHHHHHhccc---cch
Q 000156 561 KPSAKKDGSGKQETSKLTEAPEDVEPSEMSLEEIESRLGSLIPADTVGQLKSAVWKERLEAISSLRQQVEAVQN---LDQ 637 (2015)
Q Consensus 561 k~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~ee~e~~~~~ll~~~l~~~L~s~~Wk~Rl~a~e~L~~~v~~~~~---~~~ 637 (2015)
. +-+.++..|.+.+|..|..|+..|..+...... ...
T Consensus 408 ---------------------------------------~-~l~~l~~~l~d~~~~vr~~a~~~l~~~~~~~~~~~~~~~ 447 (876)
T 1qgr_A 408 ---------------------------------------Q-AMPTLIELMKDPSVVVRDTAAWTVGRICELLPEAAINDV 447 (876)
T ss_dssp ---------------------------------------H-HHHHHHHHHTCSSHHHHHHHHHHHHHHHHHCGGGTSSTT
T ss_pred ---------------------------------------H-HHHHHHHHhCCCCHHHHHHHHHHHHHHHHhCchhcccHH
Confidence 1 113456677788899999999999988876432 123
Q ss_pred HHHHHHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHcC--------------CCchhHHHHHHHHHHhhhcch-----hh
Q 000156 638 SVEILVRLVCMLPGWSEKNVQVQQQVIEVINYLAATAT--------------KFPKKCVVLCLLGISERVADI-----KT 698 (2015)
Q Consensus 638 ~~~~Lv~~L~~~pg~~DsN~qV~~~~Le~l~~l~~~~~--------------~~~~~~~~~il~~LveKlgD~-----K~ 698 (2015)
..+.++..+.. .+.|. ..|...++.++..++..++ .....++..+++.|+..+.+. .+
T Consensus 448 ~l~~~l~~l~~--~l~~~-~~v~~~a~~al~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~il~~L~~~l~~~~~~~~~~ 524 (876)
T 1qgr_A 448 YLAPLLQCLIE--GLSAE-PRVASNVCWAFSSLAEAAYEAADVADDQEEPATYCLSSSFELIVQKLLETTDRPDGHQNNL 524 (876)
T ss_dssp THHHHHHHHHH--HTTSC-HHHHHHHHHHHHHHHHHHHHTTSCTTSCCCCCCCSSTTTHHHHHHHHHHHTTSCSSCSTTH
T ss_pred HHHHHHHHHHH--HHcCC-HHHHHHHHHHHHHHHHHhhhccccccccccccchhhhHhHHHHHHHHHHHHhCcCcchhhH
Confidence 34444443322 34554 7788899999999887653 123356788899888877652 57
Q ss_pred hHHHHHHHHHHHhhhChh------HHHHHHHHHhhh----------CCC----hhHHHHHHHHHHHHHHHhC-CCCC-Ch
Q 000156 699 RAHAMKCLTTFSEAVGPG------FIFERLYKIMKD----------HKN----PKVLSEGILWMVSAVEDFG-VSHL-KL 756 (2015)
Q Consensus 699 r~~a~~~L~~l~e~~~~~------~Vl~~L~~~l~~----------~Kn----pKv~~~~l~~L~~li~~fG-~~~l-~~ 756 (2015)
|..+.++|..++...+.+ .+++.++..+.. ..+ +.++..++.++..++..+| .... -+
T Consensus 525 r~~~~~~l~~l~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~ 604 (876)
T 1qgr_A 525 RSSAYESLMEIVKNSAKDCYPAVQKTTLVIMERLQQVLQMESHIQSTSDRIQFNDLQSLLCATLQNVLRKVQHQDALQIS 604 (876)
T ss_dssp HHHHHHHHHHHHHTCCSTTHHHHHHHHHHHHHHHHHHHTTTTSCCSTTHHHHHHHHHHHHHHHHHHHHTTSCHHHHHTTH
T ss_pred HHHHHHHHHHHHHHCchhhHHHHHHHHHHHHHHHHHHHHHHhccCChhhHHHHHHHHHHHHHHHHHHHHHhChhhhhHHH
Confidence 888999999999877643 223333333211 111 5567788888888887766 2211 23
Q ss_pred hhHHHHHHhcCCCCCc--hhHHHHHHHHHHHHHHHhChhHHhhhhhccHHHHHHHHHHHhcCCCCCCCCCcccccCcccc
Q 000156 757 KDLIDFCKDTGLQSSA--AATRNATIKLLGALHKFVGPDIKGFLADVKPALLSALDAEYEKNPFEGTVVPKKTVRASEST 834 (2015)
Q Consensus 757 k~li~~l~~~gL~~sn--~~VR~aA~~ll~~Ly~~~G~~l~~~L~~lkp~ll~~Le~ef~k~~~~~~p~p~R~~r~~~~~ 834 (2015)
..+++.+..+ +.+.+ +.||..+..+++.+....|..+.+|+..+-|.+..
T Consensus 605 ~~l~~~l~~~-l~~~~~~~~v~~~a~~~l~~l~~~~~~~~~~~~~~~~~~l~~--------------------------- 656 (876)
T 1qgr_A 605 DVVMASLLRM-FQSTAGSGGVQEDALMAVSTLVEVLGGEFLKYMEAFKPFLGI--------------------------- 656 (876)
T ss_dssp HHHHHHHHHH-C-----CCHHHHHHHHHHHHHHHHHGGGGGGGHHHHHHHHHH---------------------------
T ss_pred HHHHHHHHHH-HHhccCCCCccHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH---------------------------
Confidence 5677777776 77765 48999999999999998888777766544443333
Q ss_pred CCCCCCCCCCCCCcccccccchHHHHhcCCC-ChHHHHHHHHHHHHHHHhccccCCCCChhhHHHHHHhcccc--chHHH
Q 000156 835 SSVSSGGSDGLPREDISGKFTPTLVKSLESP-DWKVRLESIEAVNKILEEANKRIQPAGTGELFGGLRGRLYD--SNKNL 911 (2015)
Q Consensus 835 ~s~~~~~~d~lprvdIs~~L~~~ll~~l~d~-~Wk~R~eale~L~~ll~~a~~~I~~~~~~eL~~~L~~rL~D--sN~~V 911 (2015)
.+.+. +|.+|..++..+..++...+..+.+. ..+++..|...|.+ .+..+
T Consensus 657 --------------------------~l~~~~~~~vr~~a~~~l~~l~~~~~~~~~~~-~~~i~~~l~~~l~~~~~~~~~ 709 (876)
T 1qgr_A 657 --------------------------GLKNYAEYQVCLAAVGLVGDLCRALQSNIIPF-CDEVMQLLLENLGNENVHRSV 709 (876)
T ss_dssp --------------------------HHHHCTTHHHHHHHHHHHHHHHHHHGGGGHHH-HHHHHHHHHHHHTCTTSCGGG
T ss_pred --------------------------HHcCcchHHHHHHHHHHHHHHHHHHHHhhhhh-HHHHHHHHHHHhCCccccHHh
Confidence 33333 67899999999999987554455554 47888888888866 46779
Q ss_pred HHHHHHHHHHHHHHhChhhHHhhhHHHHHHHHHhCCCc-----------HHHHHHHHHHHHHHHHhcC------------
Q 000156 912 VMATLITLGAVASAMGPAVEKSSKGVLSDILKCLGDNK-----------KHMRECTLTVLDAWLAAVH------------ 968 (2015)
Q Consensus 912 ~~~Al~~l~~La~alg~~f~~~~~~llp~ll~~L~D~k-----------~~Vr~aa~~aL~~i~~~~g------------ 968 (2015)
+..++.+++.++..+|.+|.+|+..++|.+++.+.++. ..+|..+..++..++..++
T Consensus 710 ~~~~~~~l~~i~~~~g~~~~~~l~~~~~~l~~~~~~~~~~~d~~~~~~~~~~r~~~~~~~~~i~~~~~~~~~~~~~~~~~ 789 (876)
T 1qgr_A 710 KPQILSVFGDIALAIGGEFKKYLEVVLNTLQQASQAQVDKSDYDMVDYLNELRESCLEAYTGIVQGLKGDQENVHPDVML 789 (876)
T ss_dssp HHHHHHHHHHHHHHHGGGGGGGHHHHHHHHHHHHTCCCCTTCHHHHHHHHHHHHHHHHHHHHHHHHHHCSSSSCCGGGGG
T ss_pred hHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHHHHHHHHHHHHccCcccccchHHH
Confidence 99999999999999999999999999999999997653 3799999999999887753
Q ss_pred chhhHHHHHHHH----hcCCCChhHHHHHHHHHHHHhccCCC-C--CC-hhhhHHHHHh-hcCCCChHHHHHHHHHHHHH
Q 000156 969 LDKMVPYVTTAL----TDAKLGAEGRKDLFDWLSKQLTGLSG-F--PD-AAHLLKPASI-AMTDKSSDVRKAAEACIVEI 1039 (2015)
Q Consensus 969 l~~ll~~l~~~L----~~~k~~p~~R~~~l~~L~~~l~~~~~-~--~~-~~~ll~pl~~-~L~D~~~~VR~aA~~~L~~l 1039 (2015)
+..+++.+...+ .++..+..+|..++..|......++. . +. ...++.+++. ++.|.+++||.+|..+++.+
T Consensus 790 ~~~~~~~i~~~l~~~~~~~~~~~~vr~~a~~~l~~l~~~~~~~~~~~~~~~~~i~~ll~~~l~~~~~~~r~~a~~a~~~~ 869 (876)
T 1qgr_A 790 VQPRVEFILSFIDHIAGDEDHTDGVVACAAGLIGDLCTAFGKDVLKLVEARPMIHELLTEGRRSKTNKAKTLARWATKEL 869 (876)
T ss_dssp SGGGHHHHHHHHHHHHTCSCCCHHHHHHHHHHHHHHHHHHCTHHHHHHHTSHHHHHHHHHHHHCSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhCcHHHHHHHhcHHHHHHHHHHhhcCCHhHHHHHHHHHHHH
Confidence 234556555555 33311467898877777766655543 1 11 2356777887 99999999999999999887
Q ss_pred HHH
Q 000156 1040 LRA 1042 (2015)
Q Consensus 1040 ~~~ 1042 (2015)
.+.
T Consensus 870 ~~~ 872 (876)
T 1qgr_A 870 RKL 872 (876)
T ss_dssp HHH
T ss_pred HHh
Confidence 643
No 14
>2qk2_A LP04448P; mini spindles, MSPS, XMAP215, DIS1, STU2, heat repeat, micro plus END, +TIP, protein binding; 2.10A {Drosophila melanogaster}
Probab=99.91 E-value=2.9e-23 Score=243.35 Aligned_cols=228 Identities=18% Similarity=0.259 Sum_probs=209.9
Q ss_pred CCCCCCcccccccchHHHHhcCCCChHHHHHHHHHHHHHHHhccccCCCCChhhHHHHHHhccc-cchHHHHHHHHHHHH
Q 000156 842 SDGLPREDISGKFTPTLVKSLESPDWKVRLESIEAVNKILEEANKRIQPAGTGELFGGLRGRLY-DSNKNLVMATLITLG 920 (2015)
Q Consensus 842 ~d~lprvdIs~~L~~~ll~~l~d~~Wk~R~eale~L~~ll~~a~~~I~~~~~~eL~~~L~~rL~-DsN~~V~~~Al~~l~ 920 (2015)
+|.++++||.++|++.+++.+.|++|++|++|++.|..++..+ ..+....+.+++..|+.++. |.|..|+..|+.+++
T Consensus 4 ~d~~~~~di~~~l~~~l~~~l~s~~w~~R~~a~~~L~~l~~~~-~~~~~~~~~~i~~~L~~~l~kd~~~~V~~~a~~~l~ 82 (242)
T 2qk2_A 4 MDLLDPVDILSKMPKDFYDKLEEKKWTLRKESLEVLEKLLTDH-PKLENGEYGALVSALKKVITKDSNVVLVAMAGKCLA 82 (242)
T ss_dssp HHTTSCBCCGGGSCTTHHHHHTCSSHHHHHHHHHHHHHHHHHC-SSBCCCCCHHHHHHHHHHHHHCSCHHHHHHHHHHHH
T ss_pred HHhCCcccccccCCHHHHhhhccCCHHHHHHHHHHHHHHHccC-CCCCCCCHHHHHHHHHHHhccCCCHHHHHHHHHHHH
Confidence 4689999999999999999999999999999999999999863 34555557999999999995 999999999999999
Q ss_pred HHHHHhChhhHHhhhHHHHHHHHHhCCCcHHHHHHHHHHHHHHHHhcCchhhHHHHHHHHhcCCCChhHHHHHHHHHHHH
Q 000156 921 AVASAMGPAVEKSSKGVLSDILKCLGDNKKHMRECTLTVLDAWLAAVHLDKMVPYVTTALTDAKLGAEGRKDLFDWLSKQ 1000 (2015)
Q Consensus 921 ~La~alg~~f~~~~~~llp~ll~~L~D~k~~Vr~aa~~aL~~i~~~~gl~~ll~~l~~~L~~~k~~p~~R~~~l~~L~~~ 1000 (2015)
.|+..+|+.|.+|+..++|.++.+++|++..||+++..+|.+++..++++.++|.+...|.++ ++.+|.+++.||...
T Consensus 83 ~la~~l~~~~~~~~~~ilp~ll~~l~d~~~~vr~~a~~aL~~~~~~~~~~~ll~~l~~~l~~~--~~~vr~~~l~~l~~~ 160 (242)
T 2qk2_A 83 LLAKGLAKRFSNYASACVPSLLEKFKEKKPNVVTALREAIDAIYASTSLEAQQESIVESLSNK--NPSVKSETALFIARA 160 (242)
T ss_dssp HHHHHHGGGGHHHHHHHHHHHHHGGGCCCHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHTTCS--CHHHHHHHHHHHHHH
T ss_pred HHHHHHhhhHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHcCC--ChHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999987 699999999999998
Q ss_pred hccCCCC----CChhhhHHHHHhhcCCCChHHHHHHHHHHHHHHHHcChhHHHHHhccCChHHHHHHHHHHhhccC
Q 000156 1001 LTGLSGF----PDAAHLLKPASIAMTDKSSDVRKAAEACIVEILRAGGQETIEKNLKDIQGPALALILERIKLNGA 1072 (2015)
Q Consensus 1001 l~~~~~~----~~~~~ll~pl~~~L~D~~~~VR~aA~~~L~~l~~~~G~~~~~~~l~~L~~~~~~~i~~~l~k~~~ 1072 (2015)
+..+... ..+..+++.+..+|+|++++||++|..|++.++.++|++.+.+++..|++.++++|.++++++..
T Consensus 161 l~~~~~~~~~~~~l~~l~p~l~~~l~D~~~~VR~~A~~~l~~l~~~vg~~~~~~~l~~L~~~~~~~i~~~~~~a~v 236 (242)
T 2qk2_A 161 LTRTQPTALNKKLLKLLTTSLVKTLNEPDPTVRDSSAEALGTLIKLMGDKAVTPLLADVDPLKMAKIKECQEKAEI 236 (242)
T ss_dssp HTTCCGGGCCHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHHHHHHHCHHHHGGGGTTSCHHHHHHHHHHHHHCCC
T ss_pred HHHcCCCCccHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHcCHHHHHHHHHhcCHHHHHHHHHHHHHHHH
Confidence 8776421 24566777799999999999999999999999999999999999999999999999999999764
No 15
>1qgr_A Protein (importin beta subunit); transport receptor, nuclear import, heat motif, NLS-binding; 2.30A {Homo sapiens} SCOP: a.118.1.1 PDB: 1qgk_A 2p8q_A 2q5d_A 3lww_A 1ukl_A 2qna_A
Probab=99.91 E-value=2.3e-19 Score=248.49 Aligned_cols=727 Identities=14% Similarity=0.105 Sum_probs=485.8
Q ss_pred hhhhcCCChHHHHHHHHHHHHHhhccCCCCchHHHhhhhhhHhhhcC--CcHHHHHHHHHHHHHHHHHhc--------h-
Q 000156 17 EDRLLHKNWKVRNEANIDLAALCDSITDPKDNRIRELGPLFKKTVAD--SNAPVQDKALDALIAYLKAAD--------A- 85 (2015)
Q Consensus 17 ~erl~~k~WK~R~~ayeeL~~~~~~~~d~~~~~~~~~~~~~~k~v~D--sN~~vqe~~leal~~~l~~~~--------~- 85 (2015)
.+.+.+.+-..|.+|-+.|.+ +... .-|. |...+-..+.+ .+..+...|..+|..++.... .
T Consensus 7 L~~~~s~d~~~r~~A~~~L~~-~~~~---~~~~---~~~~L~~~l~~~~~~~~vR~~a~~~Lk~~i~~~~~~~~~~~~~~ 79 (876)
T 1qgr_A 7 LEKTVSPDRLELEAAQKFLER-AAVE---NLPT---FLVELSRVLANPGNSQVARVAAGLQIKNSLTSKDPDIKAQYQQR 79 (876)
T ss_dssp HHGGGCSCHHHHHHHHHHHHH-HHHH---HHHH---HHHHHHHHHHCTTSCHHHHHHHHHHHHHHHCCSSHHHHHHHHHH
T ss_pred HHHhcCCCHHHHHHHHHHHHH-HHhc---Chhh---HHHHHHHHHhCCCCCHHHHHHHHHHHHHhccccchHhHHHHHhh
Confidence 345567788899999999855 4321 1123 33334455555 468899999888887763210 0
Q ss_pred --hhh-hhHHHHHHHHHHhhcC-CChhHHHHHHHHHHHHHhhhhh----hhHHHHHHHHhhcC--ChhhHHHHHHHHHHH
Q 000156 86 --DAG-RYAKEVCDAIAAKCLT-GRPKTVEKAQAVFMLWVELEAV----DVFLDVMEKAIKNK--VAKAVVPAIDVMFQA 155 (2015)
Q Consensus 86 --~~~-~~~~~v~~~LieK~l~-~k~~~k~~a~~~ll~~~E~~~~----~~v~~~L~~~~~~K--npKv~~~~l~~L~~~ 155 (2015)
... .....+-..|++- +. ..+.+ ..+..++-.++..+.+ ..+++.|...+.+. ++.++..++.+|..+
T Consensus 80 w~~l~~~~~~~ik~~ll~~-l~~~~~~~-~~~~~~l~~i~~~~~~~~~w~~ll~~l~~~l~~~~~~~~~r~~al~~l~~l 157 (876)
T 1qgr_A 80 WLAIDANARREVKNYVLHT-LGTETYRP-SSASQCVAGIACAEIPVNQWPELIPQLVANVTNPNSTEHMKESTLEAIGYI 157 (876)
T ss_dssp HHTSCHHHHHHHHHHHHHH-TTTCCSSS-CHHHHHHHHHHHHHGGGTCCTTHHHHHHHHHHCTTCCHHHHHHHHHHHHHH
T ss_pred hccCCHHHHHHHHHHHHHH-hCCCcHHH-HHHHHHHHHHHHhhCcccccHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHH
Confidence 011 1123344445553 44 45566 6667776666655322 46788888888888 999999999999999
Q ss_pred HHHhCCCCc--ChhHHHhhhhhhhcCC--ChhHHHHHHHHHHHHHHHhCCchhhHHHhhhChHHHHHHHHHHHHhcCCCC
Q 000156 156 LSEFGAKII--PPKRILKMLPELFDHQ--DQNVRASSKGLTLELCRWIGKDPVKTILFEKMRDTMKKELEVELVNVSGTA 231 (2015)
Q Consensus 156 l~~fG~~~i--~~k~il~~l~~ll~~~--d~~VR~~a~~l~~ely~~lG~~~l~~~l~~~Lk~~q~keLe~~f~k~~~~~ 231 (2015)
+..++...+ ....+++.+...+.+. +..||..|...+..+..+++.. +... .....
T Consensus 158 ~~~~~~~~~~~~~~~ll~~l~~~l~~~~~~~~vr~~a~~~l~~~~~~~~~~-~~~~-------~~~~~------------ 217 (876)
T 1qgr_A 158 CQDIDPEQLQDKSNEILTAIIQGMRKEEPSNNVKLAATNALLNSLEFTKAN-FDKE-------SERHF------------ 217 (876)
T ss_dssp HHHSCHHHHGGGHHHHHHHHHHHHSTTCSCHHHHHHHHHHHHHHGGGCHHH-HTSH-------HHHHH------------
T ss_pred HHhcCHhhHHhHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHH-HHhH-------HHHHH------------
Confidence 987653211 2456788888888887 6899999998888877665431 1000 00000
Q ss_pred CCCccchhhhhHhhhhhccccCCCCCCCCCCCCCCCCCCCCCCCCCcccccccCcchhhhhhhccCChHHHHHHHHHHHH
Q 000156 232 RPTRKIRAEQDKELGQELISEDVGPGPSEESTADVPPEIDEYELVDPVDILTPLEKSGFWEGVKATKWSERKDAVAELTK 311 (2015)
Q Consensus 232 ~P~R~~rs~~~~~~~~ea~~~~~~~~~~~~~~~~~~~~iD~~dl~~~vdIl~kl~~~~f~~~l~s~kWkeR~eaL~~L~~ 311 (2015)
++ +.+.+.+.+.+|+.|..+++.|..
T Consensus 218 -------------------------------------------------il-----~~l~~~~~~~~~~vr~~a~~~l~~ 243 (876)
T 1qgr_A 218 -------------------------------------------------IM-----QVVCEATQCPDTRVRVAALQNLVK 243 (876)
T ss_dssp -------------------------------------------------HH-----HHHHHHTTCSSHHHHHHHHHHHHH
T ss_pred -------------------------------------------------HH-----HHHHHHcCCCCHHHHHHHHHHHHH
Confidence 00 011112234456788889998888
Q ss_pred Hhc-CCCCCCCChH-HHHHHHHHHhcccCHHHHHHHHHHHHHHHHHhh------------------hc---chhhhHhHH
Q 000156 312 LAS-TKRIAPGDFT-EVCRTLKKLITDVNIAVAVEAIQAIGNLARGLR------------------TH---FSGSSRFLL 368 (2015)
Q Consensus 312 l~~-~~ki~~~~y~-~l~~~L~k~l~D~N~~V~~~A~~~l~~La~~L~------------------~~---f~~~~~~ll 368 (2015)
++. .++.....+. .++..+...+.|.+..|+..|+.++..+++... .. ..++...++
T Consensus 244 l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~al~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll 323 (876)
T 1qgr_A 244 IMSLYYQYMETYMGPALFAITIEAMKSDIDEVALQGIEFWSNVCDEEMDLAIEASEAAEQGRPPEHTSKFYAKGALQYLV 323 (876)
T ss_dssp HHHHSGGGCHHHHTTTHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCCSSCCCCHHHHHHHHHH
T ss_pred HHHHhHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHhHhhhhccccccCCCccchhHHHHHHHHHHHh
Confidence 774 4443333344 677888788888888999999999999987531 11 124568899
Q ss_pred HHHHHHhc-------cCcHHHHHHHHHHHHHHHHh-cCCChHhHHHHHHHHhhcCChHHHHHHHHHHHHHHHhcChhHHH
Q 000156 369 PVLLEKLK-------EKKPTVAESLTQTLQAMHKA-GCLNLVDVVEDVKTSVKNKVPLVRSLTLNWVTFCIETSSKAAVL 440 (2015)
Q Consensus 369 p~LL~klk-------dkk~~V~~aa~~aL~al~~~-~~~~l~~il~~l~~~L~~Knp~vR~~~l~~L~~~l~~~~~~~l~ 440 (2015)
|.++..+. +....+|.++..++..+... +..-++.+++.+...+++.+|.+|..++..+..+.....+..+.
T Consensus 324 ~~ll~~l~~~~~d~~~~~~~~r~~a~~~l~~l~~~~~~~~~~~~l~~l~~~l~~~~~~~r~~a~~~l~~i~~~~~~~~~~ 403 (876)
T 1qgr_A 324 PILTQTLTKQDENDDDDDWNPCKAAGVCLMLLATCCEDDIVPHVLPFIKEHIKNPDWRYRDAAVMAFGCILEGPEPSQLK 403 (876)
T ss_dssp HHHHHHTTCCCSSCCTTCCCHHHHHHHHHHHHHHHHGGGGHHHHHHHHHHHTTCSSHHHHHHHHHHHHHTSSSSCHHHHH
T ss_pred HHHHHHhhcccccccccccHHHHHHHHHHHHHHHHCcHhhHHHHHHHHHHHccCCChHHHHHHHHHHHHHHcCCCHHHHH
Confidence 99999986 34567999999999999876 21224567777778888999999999999998877666545566
Q ss_pred HhhhhHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhCchH-HHHHHHhccHHHHHHHHHHHhcCCCCCCCCCCCccccCC
Q 000156 441 KVHKDYVPICMECLNDGTPEVRDAAFSVLAAIAKSVGMRP-LERSIEKLDDVRRNKLSEMIAGSGGDVATGTSSARVQTS 519 (2015)
Q Consensus 441 ~~l~~l~p~l~k~L~Ds~~~VR~aA~~al~~l~~~~Ge~~-~~~~l~~Ld~~~~kkI~e~~~~~~~~~~~~~~~~~~~~~ 519 (2015)
.+++.++|.+..++.|.++.||.+|..+++.+...++... ..+++
T Consensus 404 ~~~~~~l~~l~~~l~d~~~~vr~~a~~~l~~~~~~~~~~~~~~~~l---------------------------------- 449 (876)
T 1qgr_A 404 PLVIQAMPTLIELMKDPSVVVRDTAAWTVGRICELLPEAAINDVYL---------------------------------- 449 (876)
T ss_dssp HHHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHCGGGTSSTTTH----------------------------------
T ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHhCchhcccHHHH----------------------------------
Confidence 7789999999999999999999999999998887765310 00000
Q ss_pred CCCCCCCCCCcccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcCCCCCCCCCCCCCCCCCHHHHHHHhh
Q 000156 520 GGSVPSVEASESSFVRKSAASMLSGKRPVSAAPASKKGGPVKPSAKKDGSGKQETSKLTEAPEDVEPSEMSLEEIESRLG 599 (2015)
Q Consensus 520 ~~s~~~~~~~~~~~~~~~~~s~~~~~~P~~~~~~~~k~~~~k~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~ee~e~~~~ 599 (2015)
+.+
T Consensus 450 ------------------------------------------------------------------------~~~----- 452 (876)
T 1qgr_A 450 ------------------------------------------------------------------------APL----- 452 (876)
T ss_dssp ------------------------------------------------------------------------HHH-----
T ss_pred ------------------------------------------------------------------------HHH-----
Confidence 000
Q ss_pred ccCcHHHHhhhccCCHHHHHHHHHHHHHHHHhcc---------------ccchHHHHHHHHHhcC-CCCcccHHHHHHHH
Q 000156 600 SLIPADTVGQLKSAVWKERLEAISSLRQQVEAVQ---------------NLDQSVEILVRLVCML-PGWSEKNVQVQQQV 663 (2015)
Q Consensus 600 ~ll~~~l~~~L~s~~Wk~Rl~a~e~L~~~v~~~~---------------~~~~~~~~Lv~~L~~~-pg~~DsN~qV~~~~ 663 (2015)
-+.++..|.+. ++.|..++..|..++...+ ...++.+.++..|... ....+.+..+...+
T Consensus 453 ---l~~l~~~l~~~-~~v~~~a~~al~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~il~~L~~~l~~~~~~~~~~r~~~ 528 (876)
T 1qgr_A 453 ---LQCLIEGLSAE-PRVASNVCWAFSSLAEAAYEAADVADDQEEPATYCLSSSFELIVQKLLETTDRPDGHQNNLRSSA 528 (876)
T ss_dssp ---HHHHHHHTTSC-HHHHHHHHHHHHHHHHHHHHTTSCTTSCCCCCCCSSTTTHHHHHHHHHHHTTSCSSCSTTHHHHH
T ss_pred ---HHHHHHHHcCC-HHHHHHHHHHHHHHHHHhhhccccccccccccchhhhHhHHHHHHHHHHHHhCcCcchhhHHHHH
Confidence 02334444443 6667777777766665522 1223444444433211 00111233466889
Q ss_pred HHHHHHHHHHcCCCchhHHHHHHHHHHhhhcc-----------------hhhhHHHHHHHHHHHhhhC-hh------HHH
Q 000156 664 IEVINYLAATATKFPKKCVVLCLLGISERVAD-----------------IKTRAHAMKCLTTFSEAVG-PG------FIF 719 (2015)
Q Consensus 664 Le~l~~l~~~~~~~~~~~~~~il~~LveKlgD-----------------~K~r~~a~~~L~~l~e~~~-~~------~Vl 719 (2015)
++++..++...+.-....+..+++.+++.+.+ ..++..+..+|..++...+ .. .++
T Consensus 529 ~~~l~~l~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~l~ 608 (876)
T 1qgr_A 529 YESLMEIVKNSAKDCYPAVQKTTLVIMERLQQVLQMESHIQSTSDRIQFNDLQSLLCATLQNVLRKVQHQDALQISDVVM 608 (876)
T ss_dssp HHHHHHHHHTCCSTTHHHHHHHHHHHHHHHHHHHTTTTSCCSTTHHHHHHHHHHHHHHHHHHHHTTSCHHHHHTTHHHHH
T ss_pred HHHHHHHHHHCchhhHHHHHHHHHHHHHHHHHHHHHHhccCChhhHHHHHHHHHHHHHHHHHHHHHhChhhhhHHHHHHH
Confidence 99999999877655555677888888887653 2346677888888888777 32 234
Q ss_pred HHHHHHhhhCCC--hhHHHHHHHHHHHHHHHhCCCCCC-hhhHHHHHHhcCCCCC-chhHHHHHHHHHHHHHHHhChhHH
Q 000156 720 ERLYKIMKDHKN--PKVLSEGILWMVSAVEDFGVSHLK-LKDLIDFCKDTGLQSS-AAATRNATIKLLGALHKFVGPDIK 795 (2015)
Q Consensus 720 ~~L~~~l~~~Kn--pKv~~~~l~~L~~li~~fG~~~l~-~k~li~~l~~~gL~~s-n~~VR~aA~~ll~~Ly~~~G~~l~ 795 (2015)
+.++..+ .+.+ +.++..++.++..++..+|....+ +..+++.+... +.+. ++.||.+|..+++.|...+|..+.
T Consensus 609 ~~l~~~l-~~~~~~~~v~~~a~~~l~~l~~~~~~~~~~~~~~~~~~l~~~-l~~~~~~~vr~~a~~~l~~l~~~~~~~~~ 686 (876)
T 1qgr_A 609 ASLLRMF-QSTAGSGGVQEDALMAVSTLVEVLGGEFLKYMEAFKPFLGIG-LKNYAEYQVCLAAVGLVGDLCRALQSNII 686 (876)
T ss_dssp HHHHHHC------CCHHHHHHHHHHHHHHHHHGGGGGGGHHHHHHHHHHH-HHHCTTHHHHHHHHHHHHHHHHHHGGGGH
T ss_pred HHHHHHH-HhccCCCCccHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHH-HcCcchHHHHHHHHHHHHHHHHHHHHhhh
Confidence 4444443 3333 578999999999999887754222 45677877776 8877 899999999999999999998777
Q ss_pred hhhhhccHHHHHHHHHHHhcCCCCCCCCCcccccCccccCCCCCCCCCCCCCcccccccchHHHHhcCCCChHHHHHHHH
Q 000156 796 GFLADVKPALLSALDAEYEKNPFEGTVVPKKTVRASESTSSVSSGGSDGLPREDISGKFTPTLVKSLESPDWKVRLESIE 875 (2015)
Q Consensus 796 ~~L~~lkp~ll~~Le~ef~k~~~~~~p~p~R~~r~~~~~~s~~~~~~d~lprvdIs~~L~~~ll~~l~d~~Wk~R~eale 875 (2015)
+|+..+-+.+++.+.. .+.+..+|..++.
T Consensus 687 ~~~~~i~~~l~~~l~~---------------------------------------------------~~~~~~~~~~~~~ 715 (876)
T 1qgr_A 687 PFCDEVMQLLLENLGN---------------------------------------------------ENVHRSVKPQILS 715 (876)
T ss_dssp HHHHHHHHHHHHHHTC---------------------------------------------------TTSCGGGHHHHHH
T ss_pred hhHHHHHHHHHHHhCC---------------------------------------------------ccccHHhhHHHHH
Confidence 7665554444433211 0123456778888
Q ss_pred HHHHHHHhccccCCCCChhhHHHHHHhccccc-----------hHHHHHHHHHHHHHHHHHhCh----------hhHHhh
Q 000156 876 AVNKILEEANKRIQPAGTGELFGGLRGRLYDS-----------NKNLVMATLITLGAVASAMGP----------AVEKSS 934 (2015)
Q Consensus 876 ~L~~ll~~a~~~I~~~~~~eL~~~L~~rL~Ds-----------N~~V~~~Al~~l~~La~alg~----------~f~~~~ 934 (2015)
.+..++...+..+.+. +..+++.|...+.+. ...++..+++++..++..+|. .|.+|+
T Consensus 716 ~l~~i~~~~g~~~~~~-l~~~~~~l~~~~~~~~~~~d~~~~~~~~~~r~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 794 (876)
T 1qgr_A 716 VFGDIALAIGGEFKKY-LEVVLNTLQQASQAQVDKSDYDMVDYLNELRESCLEAYTGIVQGLKGDQENVHPDVMLVQPRV 794 (876)
T ss_dssp HHHHHHHHHGGGGGGG-HHHHHHHHHHHHTCCCCTTCHHHHHHHHHHHHHHHHHHHHHHHHHHCSSSSCCGGGGGSGGGH
T ss_pred HHHHHHHHhchhHHHH-HHHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHHHHHHHHHHHHccCcccccchHHHHHHHH
Confidence 8888887544445443 467777777766543 237888999999999988864 578898
Q ss_pred hHHHHHHHHHhCCC--cHHHHHHHHHHHHHHHHhcCc--------hhhHHHHHH-HHhcCCCChhHHHHHHHHH
Q 000156 935 KGVLSDILKCLGDN--KKHMRECTLTVLDAWLAAVHL--------DKMVPYVTT-ALTDAKLGAEGRKDLFDWL 997 (2015)
Q Consensus 935 ~~llp~ll~~L~D~--k~~Vr~aa~~aL~~i~~~~gl--------~~ll~~l~~-~L~~~k~~p~~R~~~l~~L 997 (2015)
..+++.+...+.|. ...||.+|..||+.++..+|- +.+++.+.. .+.++ ++.+|..+...+
T Consensus 795 ~~i~~~l~~~~~~~~~~~~vr~~a~~~l~~l~~~~~~~~~~~~~~~~~i~~ll~~~l~~~--~~~~r~~a~~a~ 866 (876)
T 1qgr_A 795 EFILSFIDHIAGDEDHTDGVVACAAGLIGDLCTAFGKDVLKLVEARPMIHELLTEGRRSK--TNKAKTLARWAT 866 (876)
T ss_dssp HHHHHHHHHHHTCSCCCHHHHHHHHHHHHHHHHHHCTHHHHHHHTSHHHHHHHHHHHHCS--CHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhCcHHHHHHHhcHHHHHHHHHHhhcC--CHhHHHHHHHHH
Confidence 88887777776777 789999999999999999875 234555666 77665 578887655444
No 16
>2of3_A ZYG-9; multifunctional macromolecule, kinetochore, microtubule, XMAP215, STU2, DIS1, microtubule associated protein, structural protein; 1.90A {Caenorhabditis elegans}
Probab=99.89 E-value=5.1e-22 Score=230.55 Aligned_cols=218 Identities=19% Similarity=0.244 Sum_probs=193.4
Q ss_pred HHHHHHhhccCcHHHHhhhccCCHHHHHHHHHHHHHHHHhc-cccchHHHHHHHHHhcCCCCcccHHHHHHHHHHHHHHH
Q 000156 592 EEIESRLGSLIPADTVGQLKSAVWKERLEAISSLRQQVEAV-QNLDQSVEILVRLVCMLPGWSEKNVQVQQQVIEVINYL 670 (2015)
Q Consensus 592 ee~e~~~~~ll~~~l~~~L~s~~Wk~Rl~a~e~L~~~v~~~-~~~~~~~~~Lv~~L~~~pg~~DsN~qV~~~~Le~l~~l 670 (2015)
+++...+...+++++..+|+|++||.|++|++.|.+.+.+. .......+.+++|+.. ++.|+|++|..++|+++..+
T Consensus 37 ~~L~~~~~~~~~~~~~~~lfs~d~k~~~~ale~L~~~l~~~~~~~~~~lDll~kw~~l--r~~d~N~~v~~~~L~~L~~l 114 (266)
T 2of3_A 37 SQLQTLLGNQAKVSLMSQLFHKDFKQHLAALDSLVRLADTSPRSLLSNSDLLLKWCTL--RFFETNPAALIKVLELCKVI 114 (266)
T ss_dssp HHHHHHHHTTBCHHHHHHHTCSCHHHHHHHHHHHHHHHHHCHHHHHHTHHHHHHHHHH--HTTSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhccHHHHHHhcCCCHHHHHHHHHHHHHHhhhChHHHHHHHHHHHHHHHH--HHhCCCHHHHHHHHHHHHHH
Confidence 45566777889999999999999999999999999998763 3333456788999864 57899999999999999999
Q ss_pred HHHc----CCCchhHHHHHHHHHHhhhcchh--hhHHHHHHHHHHHhhhChhHHHHHHHHHhhhCCChhHHHHHHHHHHH
Q 000156 671 AATA----TKFPKKCVVLCLLGISERVADIK--TRAHAMKCLTTFSEAVGPGFIFERLYKIMKDHKNPKVLSEGILWMVS 744 (2015)
Q Consensus 671 ~~~~----~~~~~~~~~~il~~LveKlgD~K--~r~~a~~~L~~l~e~~~~~~Vl~~L~~~l~~~KnpKv~~~~l~~L~~ 744 (2015)
+..+ ..++...+..++|.|++|+||+| +|+.++++|..+++.++|..+++.++.++ .+||||+|.+|+.++..
T Consensus 115 ~~~l~~~~y~~~~~ea~~~lP~LveKlGd~k~~vR~~~r~il~~l~~v~~~~~v~~~l~~g~-ksKN~R~R~e~l~~l~~ 193 (266)
T 2of3_A 115 VELIRDTETPMSQEEVSAFVPYLLLKTGEAKDNMRTSVRDIVNVLSDVVGPLKMTPMLLDAL-KSKNARQRSECLLVIEY 193 (266)
T ss_dssp HHHHHHTTCCCCHHHHHHHHHHHHHGGGCSSHHHHHHHHHHHHHHHHHHCHHHHHHHHHHGG-GCSCHHHHHHHHHHHHH
T ss_pred HHHHHhccccchHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH-ccCCHHHHHHHHHHHHH
Confidence 8765 34677778999999999999986 89999999999999999999999999975 89999999999999999
Q ss_pred HHHHhCCCCCChhhHH---HHHHhcCCCCCchhHHHHHHHHHHHHHHHhChhHHhhhhhccHHHHHHHHHHHhcC
Q 000156 745 AVEDFGVSHLKLKDLI---DFCKDTGLQSSAAATRNATIKLLGALHKFVGPDIKGFLADVKPALLSALDAEYEKN 816 (2015)
Q Consensus 745 li~~fG~~~l~~k~li---~~l~~~gL~~sn~~VR~aA~~ll~~Ly~~~G~~l~~~L~~lkp~ll~~Le~ef~k~ 816 (2015)
+++.||.. . ...+ +.+.++ ++|+|++||++|+++++++|+++|+.++.+++++++..++.|++.|...
T Consensus 194 li~~~G~~--~-~~~l~~~~~ia~l-l~D~d~~VR~aAl~~lve~y~~~Gd~v~k~lg~L~~~~~~~l~er~~r~ 264 (266)
T 2of3_A 194 YITNAGIS--P-LKSLSVEKTVAPF-VGDKDVNVRNAAINVLVACFKFEGDQMWKAAGRMADKDKSLVEERIKRT 264 (266)
T ss_dssp HHHHHCSG--G-GGGGCHHHHHGGG-GGCSSHHHHHHHHHHHHHHHHHHTTHHHHHHCCCCHHHHHHHHHHHHHH
T ss_pred HHHhcCCC--c-cccccchHHHHHH-HcCCCHHHHHHHHHHHHHHHHHhhHHHHHHHhcCCHHHHHHHHHHHhhc
Confidence 99999986 2 3356 778887 9999999999999999999999999999999999999999999999753
No 17
>1b3u_A Protein (protein phosphatase PP2A); scaffold protein, phosphorylation, heat repeat; 2.30A {Homo sapiens} SCOP: a.118.1.2 PDB: 2ie4_A* 2ie3_A* 2npp_A* 3k7v_A* 3k7w_A* 3fga_A* 2pf4_A 2iae_A 2nym_A* 2nyl_A* 3dw8_A* 2pkg_A 3c5w_A
Probab=99.88 E-value=2.1e-20 Score=246.81 Aligned_cols=529 Identities=14% Similarity=0.136 Sum_probs=376.6
Q ss_pred HHHHHHHhcccCHHHHHHHHHHHHHHHHHhhhcchhhhHhHHHHHHHHhccCcHHHHHHHHHHHHHHHHh-c-CCChHhH
Q 000156 327 CRTLKKLITDVNIAVAVEAIQAIGNLARGLRTHFSGSSRFLLPVLLEKLKEKKPTVAESLTQTLQAMHKA-G-CLNLVDV 404 (2015)
Q Consensus 327 ~~~L~k~l~D~N~~V~~~A~~~l~~La~~L~~~f~~~~~~llp~LL~klkdkk~~V~~aa~~aL~al~~~-~-~~~l~~i 404 (2015)
+..|...+.+.+..++..|++.++.++..++.. .....++|.|.+.. |....||..+..+|..++.+ + ......+
T Consensus 12 i~~l~~~l~s~~~~~R~~A~~~l~~i~~~~~~~--~~~~~l~~~L~~~~-d~~~~vr~~~~~~L~~~~~~~~~~~~~~~l 88 (588)
T 1b3u_A 12 IAVLIDELRNEDVQLRLNSIKKLSTIALALGVE--RTRSELLPFLTDTI-YDEDEVLLALAEQLGTFTTLVGGPEYVHCL 88 (588)
T ss_dssp HHHHHHHTTCSCHHHHHHHHHTHHHHHHHSCHH--HHHHTHHHHHHHTC-CCCHHHHHHHHHHHTTCSGGGTSGGGGGGG
T ss_pred HHHHHHHhhcccHHHHHHHHHhHHHHHHHhCHH--HHHHHHHHHHHHhc-CCcHHHHHHHHHHHHHHHhccCcHHHHHHH
Confidence 556666778888889999999999988776642 44567788777666 66778888777777765543 0 1123456
Q ss_pred HHHHHHHhhcCChHHHHHHHHHHHHHHHhcChhHHHHhhhhHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhCchHHHHH
Q 000156 405 VEDVKTSVKNKVPLVRSLTLNWVTFCIETSSKAAVLKVHKDYVPICMECLNDGTPEVRDAAFSVLAAIAKSVGMRPLERS 484 (2015)
Q Consensus 405 l~~l~~~L~~Knp~vR~~~l~~L~~~l~~~~~~~l~~~l~~l~p~l~k~L~Ds~~~VR~aA~~al~~l~~~~Ge~~~~~~ 484 (2015)
++.+...+.+.++.+|..++..|..+....++..+ .+.++|.+..+..+.+..+|.+|..+++.+...++...
T Consensus 89 l~~L~~l~~~~~~~vR~~a~~~L~~l~~~~~~~~~---~~~l~~~l~~l~~~~~~~~R~~a~~~l~~~~~~~~~~~---- 161 (588)
T 1b3u_A 89 LPPLESLATVEETVVRDKAVESLRAISHEHSPSDL---EAHFVPLVKRLAGGDWFTSRTSACGLFSVCYPRVSSAV---- 161 (588)
T ss_dssp HHHHHHHTTSSCHHHHHHHHHHHHHHHTTSCHHHH---HHTHHHHHHHHHTCSSHHHHHHHGGGHHHHTTTSCHHH----
T ss_pred HHHHHHHHhCchHHHHHHHHHHHHHHHHHCCHHHH---HHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHhcCHHH----
Confidence 66666555667777777777777776666554332 24456666666666677777777776665544433110
Q ss_pred HHhccHHHHHHHHHHHhcCCCCCCCCCCCccccCCCCCCCCCCCCcccccccccccccCCCCCCCCCCCCCCCCCCCCCC
Q 000156 485 IEKLDDVRRNKLSEMIAGSGGDVATGTSSARVQTSGGSVPSVEASESSFVRKSAASMLSGKRPVSAAPASKKGGPVKPSA 564 (2015)
Q Consensus 485 l~~Ld~~~~kkI~e~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~s~~~~~~P~~~~~~~~k~~~~k~~~ 564 (2015)
++.
T Consensus 162 --------~~~--------------------------------------------------------------------- 164 (588)
T 1b3u_A 162 --------KAE--------------------------------------------------------------------- 164 (588)
T ss_dssp --------HHH---------------------------------------------------------------------
T ss_pred --------HHH---------------------------------------------------------------------
Confidence 000
Q ss_pred CCCCCCCCcCCCCCCCCCCCCCCCCCHHHHHHHhhccCcHHHHhhhccCCHHHHHHHHHHHHHHHHhccccchHHHHHHH
Q 000156 565 KKDGSGKQETSKLTEAPEDVEPSEMSLEEIESRLGSLIPADTVGQLKSAVWKERLEAISSLRQQVEAVQNLDQSVEILVR 644 (2015)
Q Consensus 565 ~~~~~~~~~~s~~~~~~~~~~~~~~s~ee~e~~~~~ll~~~l~~~L~s~~Wk~Rl~a~e~L~~~v~~~~~~~~~~~~Lv~ 644 (2015)
+.+-+...+.+.+|..|..+++.|..+....+.. ...+.++.
T Consensus 165 -------------------------------------l~~~l~~l~~d~~~~VR~~a~~~l~~l~~~~~~~-~~~~~l~~ 206 (588)
T 1b3u_A 165 -------------------------------------LRQYFRNLCSDDTPMVRRAAASKLGEFAKVLELD-NVKSEIIP 206 (588)
T ss_dssp -------------------------------------HHHHHHHHHTCSCHHHHHHHHHHHHHHHHTSCHH-HHHHTHHH
T ss_pred -------------------------------------HHHHHHHHhCCCCHHHHHHHHHHHHHHHHHhcHH-hHHHHHHH
Confidence 0123334566778889999999998887653321 11222333
Q ss_pred HHhcCCCCcccHHHHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHhhhcc--hhhhHHHHHHHHHHHhhhChhHH----
Q 000156 645 LVCMLPGWSEKNVQVQQQVIEVINYLAATATKFPKKCVVLCLLGISERVAD--IKTRAHAMKCLTTFSEAVGPGFI---- 718 (2015)
Q Consensus 645 ~L~~~pg~~DsN~qV~~~~Le~l~~l~~~~~~~~~~~~~~il~~LveKlgD--~K~r~~a~~~L~~l~e~~~~~~V---- 718 (2015)
.|.. .+.|.+..|+..+++.+..++...+. ......++|.+...+.| .++|..+.++|..+++..+++..
T Consensus 207 ~l~~--~~~d~~~~vr~~a~~~l~~l~~~~~~--~~~~~~~~~~l~~~~~d~~~~vR~~a~~~l~~l~~~~~~~~~~~~l 282 (588)
T 1b3u_A 207 MFSN--LASDEQDSVRLLAVEACVNIAQLLPQ--EDLEALVMPTLRQAAEDKSWRVRYMVADKFTELQKAVGPEITKTDL 282 (588)
T ss_dssp HHHH--HHTCSCHHHHTTHHHHHHHHHHHSCH--HHHHHHTHHHHHHHHTCSSHHHHHHHHHTHHHHHHHHCHHHHHHTH
T ss_pred HHHH--HhcCCcHHHHHHHHHHHHHHHHhCCH--HHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHhCcccchhHH
Confidence 3321 23577788999999999998886542 22345577777766666 36899999999999998876544
Q ss_pred HHHHHHHhhhCCChhHHHHHHHHHHHHHHHhCCCCC---ChhhHHHHHHhcCCCCCchhHHHHHHHHHHHHHHHhChhHH
Q 000156 719 FERLYKIMKDHKNPKVLSEGILWMVSAVEDFGVSHL---KLKDLIDFCKDTGLQSSAAATRNATIKLLGALHKFVGPDIK 795 (2015)
Q Consensus 719 l~~L~~~l~~~KnpKv~~~~l~~L~~li~~fG~~~l---~~k~li~~l~~~gL~~sn~~VR~aA~~ll~~Ly~~~G~~l~ 795 (2015)
++.++.. ..+.++.||..++..|..+...+|.... ....+++.+..+ +.+.++.||.++..+++.+...+|....
T Consensus 283 ~~~l~~~-l~d~~~~vr~~a~~~l~~~~~~~~~~~~~~~~~~~l~p~l~~~-l~d~~~~vR~~a~~~l~~l~~~~~~~~~ 360 (588)
T 1b3u_A 283 VPAFQNL-MKDCEAEVRAAASHKVKEFCENLSADCRENVIMSQILPCIKEL-VSDANQHVKSALASVIMGLSPILGKDNT 360 (588)
T ss_dssp HHHHHHH-HTCSSHHHHHHHHHHHHHHHHTSCTTTHHHHHHHTHHHHHHHH-HTCSCHHHHHHHHTTGGGGHHHHCHHHH
T ss_pred HHHHHHH-hCCCcHHHHHHHHHHHHHHHHHhChhhhhhHHHHHHHHHHHHH-hcCCCHHHHHHHHHHHHHHHHHhhHhHH
Confidence 4444444 3678999999999999999988775311 245688888888 9999999999999999988877775311
Q ss_pred hhhhhccHHHHHHHHHHHhcCCCCCCCCCcccccCccccCCCCCCCCCCCCCcccccccchHHHHhcCCCChHHHHHHHH
Q 000156 796 GFLADVKPALLSALDAEYEKNPFEGTVVPKKTVRASESTSSVSSGGSDGLPREDISGKFTPTLVKSLESPDWKVRLESIE 875 (2015)
Q Consensus 796 ~~L~~lkp~ll~~Le~ef~k~~~~~~p~p~R~~r~~~~~~s~~~~~~d~lprvdIs~~L~~~ll~~l~d~~Wk~R~eale 875 (2015)
+. .+.+.++..+.|.++.+|..+++
T Consensus 361 --~~-----------------------------------------------------~l~p~l~~~l~d~~~~Vr~~a~~ 385 (588)
T 1b3u_A 361 --IE-----------------------------------------------------HLLPLFLAQLKDECPEVRLNIIS 385 (588)
T ss_dssp --HH-----------------------------------------------------HTHHHHHHHHTCSCHHHHHHHHT
T ss_pred --HH-----------------------------------------------------HHHHHHHHHhCCCchHHHHHHHH
Confidence 00 13345666677888999999999
Q ss_pred HHHHHHHhccccCCCCChhhHHHHHHhccccchHHHHHHHHHHHHHHHHHhChhhHHhhhHHHHHHHHHhCCCcHHHHHH
Q 000156 876 AVNKILEEANKRIQPAGTGELFGGLRGRLYDSNKNLVMATLITLGAVASAMGPAVEKSSKGVLSDILKCLGDNKKHMREC 955 (2015)
Q Consensus 876 ~L~~ll~~a~~~I~~~~~~eL~~~L~~rL~DsN~~V~~~Al~~l~~La~alg~~f~~~~~~llp~ll~~L~D~k~~Vr~a 955 (2015)
.+..++...+.. .....+++.|...+.|.++.++..++.+++.++..+|..+ +...++|.++..|.|....||.+
T Consensus 386 ~l~~l~~~~~~~---~~~~~~lp~l~~~~~d~~~~vr~~~~~~l~~l~~~~~~~~--~~~~l~~~l~~~l~d~~~~Vr~~ 460 (588)
T 1b3u_A 386 NLDCVNEVIGIR---QLSQSLLPAIVELAEDAKWRVRLAIIEYMPLLAGQLGVEF--FDEKLNSLCMAWLVDHVYAIREA 460 (588)
T ss_dssp TCHHHHHHSCHH---HHHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHHCGGG--CCHHHHHHHHHGGGCSSHHHHHH
T ss_pred HHHHHHHhcCHH---HHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHcCHHH--HHHHHHHHHHHHhcCCcHHHHHH
Confidence 999888642110 1125678888888899999999999999999999999874 34578999999999999999999
Q ss_pred HHHHHHHHHHhcCc----hhhHHHHHHHHhcCCCChhHHHHHHHHHHHHhccCCCCCChhhhHHHHHhhcCCCChHHHHH
Q 000156 956 TLTVLDAWLAAVHL----DKMVPYVTTALTDAKLGAEGRKDLFDWLSKQLTGLSGFPDAAHLLKPASIAMTDKSSDVRKA 1031 (2015)
Q Consensus 956 a~~aL~~i~~~~gl----~~ll~~l~~~L~~~k~~p~~R~~~l~~L~~~l~~~~~~~~~~~ll~pl~~~L~D~~~~VR~a 1031 (2015)
|..++..++..+|. +.++|.+...+.++ +..+|..++..+.......+.......+++.+..++.|.+++||..
T Consensus 461 a~~~l~~l~~~~~~~~~~~~llp~l~~~~~~~--~~~~R~~a~~~l~~l~~~~~~~~~~~~~~~~l~~~l~d~~~~Vr~~ 538 (588)
T 1b3u_A 461 ATSNLKKLVEKFGKEWAHATIIPKVLAMSGDP--NYLHRMTTLFCINVLSEVCGQDITTKHMLPTVLRMAGDPVANVRFN 538 (588)
T ss_dssp HHHHHHHHHHHHCHHHHHHHTHHHHHHTTTCS--CHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHGGGCSCHHHHHH
T ss_pred HHHHHHHHHHHhCchhHHHHHHHHHHHHhhCC--CHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhhCCCCCchHHHH
Confidence 99999999999874 45666666555555 5789998888877655433222223456666889999999999999
Q ss_pred HHHHHHHHHHHcChhHH
Q 000156 1032 AEACIVEILRAGGQETI 1048 (2015)
Q Consensus 1032 A~~~L~~l~~~~G~~~~ 1048 (2015)
+..++..+...+|.+.+
T Consensus 539 a~~~l~~l~~~~~~~~~ 555 (588)
T 1b3u_A 539 VAKSLQKIGPILDNSTL 555 (588)
T ss_dssp HHHHHHHHGGGSCHHHH
T ss_pred HHHHHHHHHHHhchhhh
Confidence 99999999999997643
No 18
>4ffb_C Protein STU2; tubulin fold, heat repeats, cytoskeleton, microtubule, tubul domain, hydrolase; HET: GTP; 2.88A {Saccharomyces cerevisiae}
Probab=99.88 E-value=1.5e-22 Score=242.40 Aligned_cols=218 Identities=17% Similarity=0.220 Sum_probs=164.7
Q ss_pred HHhhhccCCHHHHHHHHHHHHHHHHhccccchHHHH------HHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHcCC---
Q 000156 606 TVGQLKSAVWKERLEAISSLRQQVEAVQNLDQSVEI------LVRLVCMLPGWSEKNVQVQQQVIEVINYLAATATK--- 676 (2015)
Q Consensus 606 l~~~L~s~~Wk~Rl~a~e~L~~~v~~~~~~~~~~~~------Lv~~L~~~pg~~DsN~qV~~~~Le~l~~l~~~~~~--- 676 (2015)
+.++|.|++||+|++|+++|.+.+..........+. +.+.|.+ .++|+|++|++.+++++..++..++.
T Consensus 14 l~e~l~sk~WK~R~eale~l~~~~~~~~~~~~~~~~~~~~~~~~~~lkk--~l~DsN~~v~~~al~~l~~~~~~~~~~~~ 91 (278)
T 4ffb_C 14 LEERLTYKLWKARLEAYKELNQLFRNSVGDISRDDNIQIYWRDPTLFAQ--YITDSNVVAQEQAIVALNSLIDAFASSSL 91 (278)
T ss_dssp HHHHTTCSSHHHHHHHHHHHHHHHHTC----------CCTTSCTHHHHH--HTTCSSHHHHHHHHHHHHHHHTTCC---C
T ss_pred HHHhcccCcHHHHHHHHHHHHHHHhhCcccccchhHHHHHHHHHHHHHH--HhccchHHHHHHHHHHHHHHHHHhhhhhc
Confidence 668999999999999999999999774322111111 1222322 46799999999999999999986542
Q ss_pred ---CchhHHHHHHHHHHhh-hcchh--hhHHHHHHHHHHHhhhCh-hHHHHHHHHHhhhCCChhHHHHHHHHHHHHHHHh
Q 000156 677 ---FPKKCVVLCLLGISER-VADIK--TRAHAMKCLTTFSEAVGP-GFIFERLYKIMKDHKNPKVLSEGILWMVSAVEDF 749 (2015)
Q Consensus 677 ---~~~~~~~~il~~LveK-lgD~K--~r~~a~~~L~~l~e~~~~-~~Vl~~L~~~l~~~KnpKv~~~~l~~L~~li~~f 749 (2015)
+...++..++|.|++| +||.| +|..+.++|..+++...+ ..+++.++.++ ++||||++.+++.||..++.+|
T Consensus 92 ~~~~~~~~~~~~l~~lveK~l~~~k~~~~~~a~~~l~~~~~~~~~~~~~~e~l~~~l-~~Knpkv~~~~l~~l~~~l~~f 170 (278)
T 4ffb_C 92 KNAHNITLISTWTPLLVEKGLTSSRATTKTQSMSCILSLCGLDTSITQSVELVIPFF-EKKLPKLIAAAANCVYELMAAF 170 (278)
T ss_dssp CHHHHHHHHHHHHHHHHHHTSSCCCHHHHHHHHHHHHHHHHTSSSSHHHHHHHGGGG-GCSCHHHHHHHHHHHHHHHHHH
T ss_pred ccchhHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHH-hccCHHHHHHHHHHHHHHHHHh
Confidence 1234577899999999 68865 789999999999997664 56677777764 8999999999999999999999
Q ss_pred CCCCCChhh----HHHHHHhcCCCCCchhHHHHHHHHHHHHHHHhChhH----HhhhhhccHHHHHHHHHHHhcCCCCCC
Q 000156 750 GVSHLKLKD----LIDFCKDTGLQSSAAATRNATIKLLGALHKFVGPDI----KGFLADVKPALLSALDAEYEKNPFEGT 821 (2015)
Q Consensus 750 G~~~l~~k~----li~~l~~~gL~~sn~~VR~aA~~ll~~Ly~~~G~~l----~~~L~~lkp~ll~~Le~ef~k~~~~~~ 821 (2015)
|...++++. +++.+.++ ++|+|++||++|+.++++||+++|+.+ ..|+++++|++++.|+++|+|+.++++
T Consensus 171 g~~~~~~k~~l~~i~~~l~k~-l~d~~~~VR~aA~~l~~~ly~~~G~~~~~~~~~~l~~lkp~~~k~le~~f~k~~~~~~ 249 (278)
T 4ffb_C 171 GLTNVNVQTFLPELLKHVPQL-AGHGDRNVRSQTMNLIVEIYKVTGNNSDLLEEILFKKLKPIQVKDLHKLFAKVGDEPS 249 (278)
T ss_dssp TTTTCCHHHHHHHHGGGHHHH-HTCSSHHHHHHHHHHHHHHHTC-----------CTTSSCHHHHHHHHHHHSCCCC---
T ss_pred CCCcCCchhHHHHHHHHHHHH-HhCCcHHHHHHHHHHHHHHHHHhCcchhhhhhhhhhcCCHHHHHHHHHHHHhcCCCCC
Confidence 998887665 44456676 999999999999999999999999865 467899999999999999999988766
Q ss_pred CCCccc
Q 000156 822 VVPKKT 827 (2015)
Q Consensus 822 p~p~R~ 827 (2015)
|.+.+.
T Consensus 250 ~~~~~~ 255 (278)
T 4ffb_C 250 SSKMLF 255 (278)
T ss_dssp ----CC
T ss_pred CCCcch
Confidence 665554
No 19
>1ibr_B P95, importin beta-1 subunit, nuclear factor; small GTPase, nuclear transport receptor, cell cycle, translation; HET: GNP; 2.30A {Homo sapiens} SCOP: a.118.1.1 PDB: 1m5n_S 1gcj_A 1f59_A 1o6o_A 1o6p_A
Probab=99.46 E-value=6.7e-11 Score=150.83 Aligned_cols=378 Identities=12% Similarity=0.068 Sum_probs=269.5
Q ss_pred HHHhhhccCCHHHHHHHHHHHHHHHHhccccchHHHHHHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHc----------
Q 000156 605 DTVGQLKSAVWKERLEAISSLRQQVEAVQNLDQSVEILVRLVCMLPGWSEKNVQVQQQVIEVINYLAATA---------- 674 (2015)
Q Consensus 605 ~l~~~L~s~~Wk~Rl~a~e~L~~~v~~~~~~~~~~~~Lv~~L~~~pg~~DsN~qV~~~~Le~l~~l~~~~---------- 674 (2015)
.++.++.+.+-..|.+|-+.|.++-.... ......++..+.. .+.+..|++.+.-++..++...
T Consensus 5 ~~L~~~~s~d~~~r~~Ae~~L~~~~~~~~--~~~~~~L~~il~~----~~~~~~vR~~a~~~Lk~~i~~~~~~~~~~~~~ 78 (462)
T 1ibr_B 5 TILEKTVSPDRLELEAAQKFLERAAVENL--PTFLVELSRVLAN----PGNSQVARVAAGLQIKNSLTSKDPDIKAQYQQ 78 (462)
T ss_dssp HHHHHTTCSCHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHC----TTSCHHHHHHHHHHHHHHHCCSSHHHHHHHHH
T ss_pred HHHHHhcCCCHHHHHHHHHHHHHHHhhCh--HHHHHHHHHHHHc----CCCChHHHHHHHHHHHHhccccchHHHHHHHh
Confidence 45677888899999999999987544211 1133445555542 2346788898888888876421
Q ss_pred --CCCchhHHHHHHHHHHhhhcc--hhhhHHHHHHHHHHHhhhChh----HHHHHHHHHhhhCC--ChhHHHHHHHHHHH
Q 000156 675 --TKFPKKCVVLCLLGISERVAD--IKTRAHAMKCLTTFSEAVGPG----FIFERLYKIMKDHK--NPKVLSEGILWMVS 744 (2015)
Q Consensus 675 --~~~~~~~~~~il~~LveKlgD--~K~r~~a~~~L~~l~e~~~~~----~Vl~~L~~~l~~~K--npKv~~~~l~~L~~ 744 (2015)
..+.......+-..|++.+.+ .++ ..+..++..++....+. -+++.++..+ .+. ++.++..++.+|..
T Consensus 79 ~~~~l~~~~~~~ik~~ll~~l~~~~~~v-~~~~~~i~~ia~~~~~~~~w~~ll~~L~~~l-~~~~~~~~~r~~al~~l~~ 156 (462)
T 1ibr_B 79 RWLAIDANARREVKNYVLQTLGTETYRP-SSASQCVAGIACAEIPVNQWPELIPQLVANV-TNPNSTEHMKESTLEAIGY 156 (462)
T ss_dssp HHHTSCHHHHHHHHHHHHHHTTCCCSSS-CSHHHHHHHHHHHHGGGTCCTTHHHHHHHHH-HCTTCCHHHHHHHHHHHHH
T ss_pred hhhcCCHHHHHHHHHHHHHHhCCCCchh-hHHHHHHHHHHHHhccccccHHHHHHHHHHh-ccCCCCHHHHHHHHHHHHH
Confidence 223444445566667777766 357 77888898888876553 3666666665 455 89999999999999
Q ss_pred HHHHhCCCCC--ChhhHHHHHHhcCCCCC--chhHHHHHHHHHHHHHHHhChhHHhhhhhccHHHHHHHHHHHhcCCCCC
Q 000156 745 AVEDFGVSHL--KLKDLIDFCKDTGLQSS--AAATRNATIKLLGALHKFVGPDIKGFLADVKPALLSALDAEYEKNPFEG 820 (2015)
Q Consensus 745 li~~fG~~~l--~~k~li~~l~~~gL~~s--n~~VR~aA~~ll~~Ly~~~G~~l~~~L~~lkp~ll~~Le~ef~k~~~~~ 820 (2015)
+++++....+ ....+++.+..+ +.+. ++.||.+|.++++.+..+++..+.. .. +.
T Consensus 157 l~~~~~~~~~~~~~~~ll~~l~~~-l~~~~~~~~vr~~a~~~l~~~~~~~~~~~~~-------~~-------~~------ 215 (462)
T 1ibr_B 157 ICQDIDPEQLQDKSNEILTAIIQG-MRKEEPSNNVKLAATNALLNSLEFTKANFDK-------ES-------ER------ 215 (462)
T ss_dssp HHHHSCGGGTGGGHHHHHHHHHHH-HSTTCCCHHHHHHHHHHHHHHTTTTHHHHTS-------HH-------HH------
T ss_pred HHHhCCchhhHhHHHHHHHHHHHH-hCCCCCCHHHHHHHHHHHHHHHHHHHHhhhh-------hH-------HH------
Confidence 9998743222 245677878776 8888 7999999999988764322211100 00 00
Q ss_pred CCCCcccccCccccCCCCCCCCCCCCCcccccccchHHHHhcCCCChHHHHHHHHHHHHHHHhccccCCCCChh-hHHHH
Q 000156 821 TVVPKKTVRASESTSSVSSGGSDGLPREDISGKFTPTLVKSLESPDWKVRLESIEAVNKILEEANKRIQPAGTG-ELFGG 899 (2015)
Q Consensus 821 ~p~p~R~~r~~~~~~s~~~~~~d~lprvdIs~~L~~~ll~~l~d~~Wk~R~eale~L~~ll~~a~~~I~~~~~~-eL~~~ 899 (2015)
..+.+.+...+.+.++.+|..+++.+..++......+.+. +. .++..
T Consensus 216 -------------------------------~~l~~~l~~~~~~~~~~vr~~~~~~l~~l~~~~~~~~~~~-~~~~l~~~ 263 (462)
T 1ibr_B 216 -------------------------------HFIMQVVCEATQCPDTRVRVAALQNLVKIMSLYYQYMETY-MGPALFAI 263 (462)
T ss_dssp -------------------------------HHHHHHHHHHTTCSSHHHHHHHHHHHHHHHHHCGGGCTTT-TTTTHHHH
T ss_pred -------------------------------HHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHH
Confidence 0012233344567789999999999999998654556555 46 88998
Q ss_pred HHhccccchHHHHHHHHHHHHHHHHHh---------------------ChhhHHhhhHHHHHHHHHhCCC-------cHH
Q 000156 900 LRGRLYDSNKNLVMATLITLGAVASAM---------------------GPAVEKSSKGVLSDILKCLGDN-------KKH 951 (2015)
Q Consensus 900 L~~rL~DsN~~V~~~Al~~l~~La~al---------------------g~~f~~~~~~llp~ll~~L~D~-------k~~ 951 (2015)
+...+.|.+..|+..|+..+..++... ..-+++|+..++|.++..+.+. ...
T Consensus 264 ~~~~~~~~~~~v~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~p~l~~~l~~~d~d~~~~~~~ 343 (462)
T 1ibr_B 264 TIEAMKSDIDEVALQGIEFWSNVCDEEMDLAIEASEAAEQGRPPEHTSKFYAKGALQYLVPILTQTLTKQDENDDDDDWN 343 (462)
T ss_dssp HHHHHHCSSHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCSSSCSSCCCCCHHHHHHHHHHHHHHHHTTCCCSSCCTTCCS
T ss_pred HHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCccchhHHHHHHHhhhccHHHHHHHHhcccccccccch
Confidence 888899999999999999999998763 2234567889999999988643 347
Q ss_pred HHHHHHHHHHHHHHhcCchhhHH----HHHHHHhcCCCChhHHHHHHHHHHHHhccCCC---CCChhhhHHHHHhhcCCC
Q 000156 952 MRECTLTVLDAWLAAVHLDKMVP----YVTTALTDAKLGAEGRKDLFDWLSKQLTGLSG---FPDAAHLLKPASIAMTDK 1024 (2015)
Q Consensus 952 Vr~aa~~aL~~i~~~~gl~~ll~----~l~~~L~~~k~~p~~R~~~l~~L~~~l~~~~~---~~~~~~ll~pl~~~L~D~ 1024 (2015)
+|.+|..+|..++..+| +.+++ .+...|.+. ++..|..++..+......... .+.+..+++.++.+|.|+
T Consensus 344 ~r~~a~~~L~~l~~~~~-~~~~~~~~~~l~~~l~~~--~~~~r~aal~~l~~l~~~~~~~~~~~~l~~~~~~l~~~l~d~ 420 (462)
T 1ibr_B 344 PCKAAGVCLMLLATCCE-DDIVPHVLPFIKEHIKNP--DWRYRDAAVMAFGCILEGPEPSQLKPLVIQAMPTLIELMKDP 420 (462)
T ss_dssp HHHHHHHHHHHHHHHTT-TTHHHHHHHHHHHHTTCS--SHHHHHHHHHHHHHTSSSSCTTTTCTTTTTHHHHHHHGGGCS
T ss_pred HHHHHHHHHHHHHHhcc-HHHHHHHHHHHHHHhcCC--ChHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHhcCC
Confidence 99999999999999998 45444 455556555 588999999988876654431 234566777799999999
Q ss_pred ChHHHHHHHHHHHHHHHHcChh
Q 000156 1025 SSDVRKAAEACIVEILRAGGQE 1046 (2015)
Q Consensus 1025 ~~~VR~aA~~~L~~l~~~~G~~ 1046 (2015)
++.||.+|..+++.+...+|..
T Consensus 421 ~~~Vr~~a~~~l~~~~~~~~~~ 442 (462)
T 1ibr_B 421 SVVVRDTAAWTVGRICELLPEA 442 (462)
T ss_dssp CHHHHHHHHHHHHHHHHHGGGG
T ss_pred CHHHHHHHHHHHHHHHHhcccc
Confidence 9999999999999999988863
No 20
>1ibr_B P95, importin beta-1 subunit, nuclear factor; small GTPase, nuclear transport receptor, cell cycle, translation; HET: GNP; 2.30A {Homo sapiens} SCOP: a.118.1.1 PDB: 1m5n_S 1gcj_A 1f59_A 1o6o_A 1o6p_A
Probab=99.42 E-value=8.2e-11 Score=150.00 Aligned_cols=380 Identities=13% Similarity=0.090 Sum_probs=264.4
Q ss_pred hhhhcCCChHHHHHHHHHHHHHhhccCCCCchHHHhhhhhhHhhhcCC--cHHHHHHHHHHHHHHHHHhch---------
Q 000156 17 EDRLLHKNWKVRNEANIDLAALCDSITDPKDNRIRELGPLFKKTVADS--NAPVQDKALDALIAYLKAADA--------- 85 (2015)
Q Consensus 17 ~erl~~k~WK~R~~ayeeL~~~~~~~~d~~~~~~~~~~~~~~k~v~Ds--N~~vqe~~leal~~~l~~~~~--------- 85 (2015)
.+.+.+.+-..|.+|-+.|.+ +... +.|.|. ..+...+.++ +..+...|...|-.+++....
T Consensus 7 L~~~~s~d~~~r~~Ae~~L~~-~~~~---~~~~~~---~~L~~il~~~~~~~~vR~~a~~~Lk~~i~~~~~~~~~~~~~~ 79 (462)
T 1ibr_B 7 LEKTVSPDRLELEAAQKFLER-AAVE---NLPTFL---VELSRVLANPGNSQVARVAAGLQIKNSLTSKDPDIKAQYQQR 79 (462)
T ss_dssp HHHTTCSCHHHHHHHHHHHHH-HHHH---HHHHHH---HHHHHHHHCTTSCHHHHHHHHHHHHHHHCCSSHHHHHHHHHH
T ss_pred HHHhcCCCHHHHHHHHHHHHH-HHhh---ChHHHH---HHHHHHHHcCCCChHHHHHHHHHHHHhccccchHHHHHHHhh
Confidence 455677888999999999877 4321 123442 3333444443 788999998888888743210
Q ss_pred --hhh-hhHHHHHHHHHHhhcCCChhHHHHHHHHHHHHHhhhhh----hhHHHHHHHHhhcC--ChhhHHHHHHHHHHHH
Q 000156 86 --DAG-RYAKEVCDAIAAKCLTGRPKTVEKAQAVFMLWVELEAV----DVFLDVMEKAIKNK--VAKAVVPAIDVMFQAL 156 (2015)
Q Consensus 86 --~~~-~~~~~v~~~LieK~l~~k~~~k~~a~~~ll~~~E~~~~----~~v~~~L~~~~~~K--npKv~~~~l~~L~~~l 156 (2015)
... .....|-..|++.+....+.+ ..+..++-.++..+.+ ..+++.|...+.+. ++.++.+++.+|..+.
T Consensus 80 ~~~l~~~~~~~ik~~ll~~l~~~~~~v-~~~~~~i~~ia~~~~~~~~w~~ll~~L~~~l~~~~~~~~~r~~al~~l~~l~ 158 (462)
T 1ibr_B 80 WLAIDANARREVKNYVLQTLGTETYRP-SSASQCVAGIACAEIPVNQWPELIPQLVANVTNPNSTEHMKESTLEAIGYIC 158 (462)
T ss_dssp HHTSCHHHHHHHHHHHHHHTTCCCSSS-CSHHHHHHHHHHHHGGGTCCTTHHHHHHHHHHCTTCCHHHHHHHHHHHHHHH
T ss_pred hhcCCHHHHHHHHHHHHHHhCCCCchh-hHHHHHHHHHHHHhccccccHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHH
Confidence 011 122345555666533345566 6666666666655433 36778888888887 8999999999999999
Q ss_pred HHhCCCCcC--hhHHHhhhhhhhcCC--ChhHHHHHHHHHHHHHHHhCCchhhHHHhhhChHHHHHHHHHHHHhcCCCCC
Q 000156 157 SEFGAKIIP--PKRILKMLPELFDHQ--DQNVRASSKGLTLELCRWIGKDPVKTILFEKMRDTMKKELEVELVNVSGTAR 232 (2015)
Q Consensus 157 ~~fG~~~i~--~k~il~~l~~ll~~~--d~~VR~~a~~l~~ely~~lG~~~l~~~l~~~Lk~~q~keLe~~f~k~~~~~~ 232 (2015)
+.+....+. ...+++.+..++.+. +..||.+|...+..+..++++ .. .. .. +.+
T Consensus 159 ~~~~~~~~~~~~~~ll~~l~~~l~~~~~~~~vr~~a~~~l~~~~~~~~~-----~~-~~---~~-------~~~------ 216 (462)
T 1ibr_B 159 QDIDPEQLQDKSNEILTAIIQGMRKEEPSNNVKLAATNALLNSLEFTKA-----NF-DK---ES-------ERH------ 216 (462)
T ss_dssp HHSCGGGTGGGHHHHHHHHHHHHSTTCCCHHHHHHHHHHHHHHTTTTHH-----HH-TS---HH-------HHH------
T ss_pred HhCCchhhHhHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHH-----hh-hh---hH-------HHH------
Confidence 987433322 356889999999998 799999988876665433221 11 00 00 000
Q ss_pred CCccchhhhhHhhhhhccccCCCCCCCCCCCCCCCCCCCCCCCCCcccccccCcchhhhhhhccCChHHHHHHHHHHHHH
Q 000156 233 PTRKIRAEQDKELGQELISEDVGPGPSEESTADVPPEIDEYELVDPVDILTPLEKSGFWEGVKATKWSERKDAVAELTKL 312 (2015)
Q Consensus 233 P~R~~rs~~~~~~~~ea~~~~~~~~~~~~~~~~~~~~iD~~dl~~~vdIl~kl~~~~f~~~l~s~kWkeR~eaL~~L~~l 312 (2015)
| ++ ..+.+.+.+.++..|..+++.|..+
T Consensus 217 ----------------------------------------~-------l~-----~~l~~~~~~~~~~vr~~~~~~l~~l 244 (462)
T 1ibr_B 217 ----------------------------------------F-------IM-----QVVCEATQCPDTRVRVAALQNLVKI 244 (462)
T ss_dssp ----------------------------------------H-------HH-----HHHHHHTTCSSHHHHHHHHHHHHHH
T ss_pred ----------------------------------------H-------HH-----HHHHHhcCCCCHHHHHHHHHHHHHH
Confidence 0 00 0111223455677788999999888
Q ss_pred hc-CCCCCCCChH-HHHHHHHHHhcccCHHHHHHHHHHHHHHHHHh---------------------hhcchhhhHhHHH
Q 000156 313 AS-TKRIAPGDFT-EVCRTLKKLITDVNIAVAVEAIQAIGNLARGL---------------------RTHFSGSSRFLLP 369 (2015)
Q Consensus 313 ~~-~~ki~~~~y~-~l~~~L~k~l~D~N~~V~~~A~~~l~~La~~L---------------------~~~f~~~~~~llp 369 (2015)
+. .++.....+. .++..+...+.|.+..|+..|+.++..++... ..-+.+|...++|
T Consensus 245 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~p 324 (462)
T 1ibr_B 245 MSLYYQYMETYMGPALFAITIEAMKSDIDEVALQGIEFWSNVCDEEMDLAIEASEAAEQGRPPEHTSKFYAKGALQYLVP 324 (462)
T ss_dssp HHHCGGGCTTTTTTTHHHHHHHHHHCSSHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCSSSCSSCCCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCccchhHHHHHHHhhhccH
Confidence 73 4444334455 78888888888999999999999999998764 1123467789999
Q ss_pred HHHHHhcc-------CcHHHHHHHHHHHHHHHHh-cCCChHhHHHHHHHHhhcCChHHHHHHHHHHHHHHHhcChhHHHH
Q 000156 370 VLLEKLKE-------KKPTVAESLTQTLQAMHKA-GCLNLVDVVEDVKTSVKNKVPLVRSLTLNWVTFCIETSSKAAVLK 441 (2015)
Q Consensus 370 ~LL~klkd-------kk~~V~~aa~~aL~al~~~-~~~~l~~il~~l~~~L~~Knp~vR~~~l~~L~~~l~~~~~~~l~~ 441 (2015)
.+++.+.+ ....+|.++..+|..++.. +..-+..+++.+...+++.+|.+|..++..|..+...+....+..
T Consensus 325 ~l~~~l~~~d~d~~~~~~~~r~~a~~~L~~l~~~~~~~~~~~~~~~l~~~l~~~~~~~r~aal~~l~~l~~~~~~~~~~~ 404 (462)
T 1ibr_B 325 ILTQTLTKQDENDDDDDWNPCKAAGVCLMLLATCCEDDIVPHVLPFIKEHIKNPDWRYRDAAVMAFGCILEGPEPSQLKP 404 (462)
T ss_dssp HHHHHTTCCCSSCCTTCCSHHHHHHHHHHHHHHHTTTTHHHHHHHHHHHHTTCSSHHHHHHHHHHHHHTSSSSCTTTTCT
T ss_pred HHHHHHHhcccccccccchHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHhcCCcHHHHHH
Confidence 99998854 3457899999999999886 112234566777778889999999999999998877655444556
Q ss_pred hhhhHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhCc
Q 000156 442 VHKDYVPICMECLNDGTPEVRDAAFSVLAAIAKSVGM 478 (2015)
Q Consensus 442 ~l~~l~p~l~k~L~Ds~~~VR~aA~~al~~l~~~~Ge 478 (2015)
+++.++|.+..++.|+++.||.+|+.+++.+...++.
T Consensus 405 ~l~~~~~~l~~~l~d~~~~Vr~~a~~~l~~~~~~~~~ 441 (462)
T 1ibr_B 405 LVIQAMPTLIELMKDPSVVVRDTAAWTVGRICELLPE 441 (462)
T ss_dssp TTTTHHHHHHHGGGCSCHHHHHHHHHHHHHHHHHGGG
T ss_pred HHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHhccc
Confidence 7799999999999999999999999999999999886
No 21
>2vgl_B AP-2 complex subunit beta-1; cytoplasmic vesicle, alternative splicing, endocytosis, lipid-binding, golgi apparatus, adaptor, membrane, transport; HET: IHP; 2.59A {Homo sapiens} SCOP: i.23.1.1 PDB: 2jkt_B 2jkr_B* 2xa7_B 1w63_B
Probab=99.29 E-value=2.4e-09 Score=141.66 Aligned_cols=479 Identities=13% Similarity=0.161 Sum_probs=298.3
Q ss_pred chhhhHhHHHHHHHHhccCcHHHH-HHHHHHHHHHHHhcCCChHhHHHHHHHHhhcCChHHHHHHHHHHHHHHHhcChhH
Q 000156 360 FSGSSRFLLPVLLEKLKEKKPTVA-ESLTQTLQAMHKAGCLNLVDVVEDVKTSVKNKVPLVRSLTLNWVTFCIETSSKAA 438 (2015)
Q Consensus 360 f~~~~~~llp~LL~klkdkk~~V~-~aa~~aL~al~~~~~~~l~~il~~l~~~L~~Knp~vR~~~l~~L~~~l~~~~~~~ 438 (2015)
|..+.+.-+..+-+.|.+.+...+ +++...+. +...| ...+.+++.++..++++++.+|+-+..++..+....+
T Consensus 7 f~~~~~~e~~~i~~~L~~~~~~~k~~~~~kli~-~~~~G-~d~~~~~~~vi~l~~s~~~~~Krl~yl~l~~~~~~~~--- 81 (591)
T 2vgl_B 7 FTTNKKGEIFELKAELNNEKKEKRKEAVKKVIA-AMTVG-KDVSSLFPDVVNCMQTDNLELKKLVYLYLMNYAKSQP--- 81 (591)
T ss_dssp TCCCSSSHHHHHHHHTTSSCHHHHHHHHHHHHH-HHHTT-CCCGGGHHHHHHTTSSSCHHHHHHHHHHHHHHHHHSH---
T ss_pred cccccCChHHHHHHHHcCCCHHHHHHHHHHHHH-HHHCC-CChHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcccCc---
Confidence 444444556667777776665444 34444443 33222 4556778888888899999999988888877665422
Q ss_pred HHHhhhhHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhCchHHHHHHHhccHHHHHHHHHHHhcCCCCCCCCCCCccccC
Q 000156 439 VLKVHKDYVPICMECLNDGTPEVRDAAFSVLAAIAKSVGMRPLERSIEKLDDVRRNKLSEMIAGSGGDVATGTSSARVQT 518 (2015)
Q Consensus 439 l~~~l~~l~p~l~k~L~Ds~~~VR~aA~~al~~l~~~~Ge~~~~~~l~~Ld~~~~kkI~e~~~~~~~~~~~~~~~~~~~~ 518 (2015)
..+-.++..+.+.|+|+++.||..|..+++.+ +...+.+
T Consensus 82 --e~~~l~~n~l~kdL~~~n~~ir~~AL~~L~~i----~~~~~~~----------------------------------- 120 (591)
T 2vgl_B 82 --DMAIMAVNSFVKDCEDPNPLIRALAVRTMGCI----RVDKITE----------------------------------- 120 (591)
T ss_dssp --HHHHTTHHHHGGGSSSSSHHHHHHHHHHHHTC----CSGGGHH-----------------------------------
T ss_pred --hHHHHHHHHHHHHcCCCCHHHHHHHHHHHHcC----ChHHHHH-----------------------------------
Confidence 12244567888999999999998887666432 1111110
Q ss_pred CCCCCCCCCCCcccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcCCCCCCCCCCCCCCCCCHHHHHHHh
Q 000156 519 SGGSVPSVEASESSFVRKSAASMLSGKRPVSAAPASKKGGPVKPSAKKDGSGKQETSKLTEAPEDVEPSEMSLEEIESRL 598 (2015)
Q Consensus 519 ~~~s~~~~~~~~~~~~~~~~~s~~~~~~P~~~~~~~~k~~~~k~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~ee~e~~~ 598 (2015)
T Consensus 121 -------------------------------------------------------------------------------- 120 (591)
T 2vgl_B 121 -------------------------------------------------------------------------------- 120 (591)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hccCcHHHHhhhccCCHHHHHHHHHHHHHHHHhccccchHHHHHHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHcCCC-
Q 000156 599 GSLIPADTVGQLKSAVWKERLEAISSLRQQVEAVQNLDQSVEILVRLVCMLPGWSEKNVQVQQQVIEVINYLAATATKF- 677 (2015)
Q Consensus 599 ~~ll~~~l~~~L~s~~Wk~Rl~a~e~L~~~v~~~~~~~~~~~~Lv~~L~~~pg~~DsN~qV~~~~Le~l~~l~~~~~~~- 677 (2015)
.+.+.+...|.|.++..|..|+..+..++....+.... ..++..|.. .+.|.|..|+..++.++..+....+..
T Consensus 121 --~l~~~l~~~L~d~~~~VRk~A~~al~~i~~~~p~~~~~-~~~~~~l~~--lL~d~d~~V~~~A~~aL~~i~~~~~~~~ 195 (591)
T 2vgl_B 121 --YLCEPLRKCLKDEDPYVRKTAAVCVAKLHDINAQMVED-QGFLDSLRD--LIADSNPMVVANAVAALSEISESHPNSN 195 (591)
T ss_dssp --HHHHHHHHHSSCSCHHHHHHHHHHHHHHHHSSCCCHHH-HHHHHHHHH--TTSCSCHHHHHHHHHHHHHHTTSCCSCC
T ss_pred --HHHHHHHHHcCCCChHHHHHHHHHHHHHHhhChhhccc-ccHHHHHHH--HhCCCChhHHHHHHHHHHHHHhhCCCcc
Confidence 01134556677778888888888888887653332211 123333332 357888888888888888877643321
Q ss_pred chhHHHHHHHHHHhhhcc--hhhhHHHHHHHHHHHhhhC--hhHHHHHHHHHhhhCCChhHHHHHHHHHHHHHHHhC--C
Q 000156 678 PKKCVVLCLLGISERVAD--IKTRAHAMKCLTTFSEAVG--PGFIFERLYKIMKDHKNPKVLSEGILWMVSAVEDFG--V 751 (2015)
Q Consensus 678 ~~~~~~~il~~LveKlgD--~K~r~~a~~~L~~l~e~~~--~~~Vl~~L~~~l~~~KnpKv~~~~l~~L~~li~~fG--~ 751 (2015)
........+..|+..+.+ +-.+-...++|..++.... ...+++.+... .++.|+.|+.+|+..+..+....+ .
T Consensus 196 ~~~l~~~~~~~Ll~~l~~~~~~~q~~il~~l~~l~~~~~~~~~~~l~~l~~~-l~~~~~~V~~ea~~~i~~l~~~~~~~~ 274 (591)
T 2vgl_B 196 LLDLNPQNINKLLTALNECTEWGQIFILDCLSNYNPKDDREAQSICERVTPR-LSHANSAVVLSAVKVLMKFLELLPKDS 274 (591)
T ss_dssp SCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHTSCCCSHHHHHHHHHHHTTC-SCSSTTHHHHHHHHHHHHSCCSCCBTT
T ss_pred chhccHHHHHHHHHcCCCCCchHHHHHHHHHHHhCCCChHHHHHHHHHHHHH-HcCCChHHHHHHHHHHHHHhhccCCCH
Confidence 011122334444444332 2233333333332221100 12344444444 368899999999988876543221 1
Q ss_pred CCCC--hhhHHHHHHhcCCCCCchhHHHHHHHHHHHHHHHhChhHHhhhhhccHHHHHHHHHHHhcCCCCCCCCCccccc
Q 000156 752 SHLK--LKDLIDFCKDTGLQSSAAATRNATIKLLGALHKFVGPDIKGFLADVKPALLSALDAEYEKNPFEGTVVPKKTVR 829 (2015)
Q Consensus 752 ~~l~--~k~li~~l~~~gL~~sn~~VR~aA~~ll~~Ly~~~G~~l~~~L~~lkp~ll~~Le~ef~k~~~~~~p~p~R~~r 829 (2015)
+.+. ...+...+..+ + +++++||..|...++.+.......+..
T Consensus 275 ~~~~~~~~~~~~~L~~L-~-~~d~~vr~~aL~~l~~i~~~~p~~~~~--------------------------------- 319 (591)
T 2vgl_B 275 DYYNMLLKKLAPPLVTL-L-SGEPEVQYVALRNINLIVQKRPEILKQ--------------------------------- 319 (591)
T ss_dssp BSHHHHHHHTHHHHHHH-T-TSCHHHHHHHHHHHHHHHHHCCSTTTT---------------------------------
T ss_pred HHHHHHHHHHHHHHHHH-h-cCCccHHHHHHHHHHHHHHhChHHHHH---------------------------------
Confidence 1111 12233333343 4 588999999999998875432111000
Q ss_pred CccccCCCCCCCCCCCCCcccccccchHHHHhcCCCChHHHHHHHHHHHHHHHhccccCCCCChhhHHHHHHhccccchH
Q 000156 830 ASESTSSVSSGGSDGLPREDISGKFTPTLVKSLESPDWKVRLESIEAVNKILEEANKRIQPAGTGELFGGLRGRLYDSNK 909 (2015)
Q Consensus 830 ~~~~~~s~~~~~~d~lprvdIs~~L~~~ll~~l~d~~Wk~R~eale~L~~ll~~a~~~I~~~~~~eL~~~L~~rL~DsN~ 909 (2015)
. +. .|+...+| +|.+|.++++.+..+..+ .....++..|...+.|.+.
T Consensus 320 -------------------~----~~-~~~~~~~d-~~~Ir~~al~~L~~l~~~-------~nv~~iv~~L~~~l~~~d~ 367 (591)
T 2vgl_B 320 -------------------E----IK-VFFVKYND-PIYVKLEKLDIMIRLASQ-------ANIAQVLAELKEYATEVDV 367 (591)
T ss_dssp -------------------C----TT-TTSCCTTS-CHHHHHHHHHHHHHTCCS-------STHHHHHHHHHHHTTSSCH
T ss_pred -------------------H----HH-hheeccCC-hHHHHHHHHHHHHHHCCh-------hhHHHHHHHHHHHHhcCCH
Confidence 0 00 11212233 499999999888776532 2257888999999999999
Q ss_pred HHHHHHHHHHHHHHHHhChhhHHhhhHHHHHHHHHhCCCcHHHHHHHHHHHHHHHHhcCc--hhhHHHHHHHHhcCCCCh
Q 000156 910 NLVMATLITLGAVASAMGPAVEKSSKGVLSDILKCLGDNKKHMRECTLTVLDAWLAAVHL--DKMVPYVTTALTDAKLGA 987 (2015)
Q Consensus 910 ~V~~~Al~~l~~La~alg~~f~~~~~~llp~ll~~L~D~k~~Vr~aa~~aL~~i~~~~gl--~~ll~~l~~~L~~~k~~p 987 (2015)
.++..++..|+.++... .+....+++.++..+.+....|+..+..++..+++..+- ..+++.+...+.+-. .|
T Consensus 368 ~~r~~~v~aI~~la~~~----~~~~~~~v~~Ll~ll~~~~~~v~~e~i~~l~~ii~~~p~~~~~~v~~L~~~l~~~~-~~ 442 (591)
T 2vgl_B 368 DFVRKAVRAIGRCAIKV----EQSAERCVSTLLDLIQTKVNYVVQEAIVVIRDIFRKYPNKYESIIATLCENLDSLD-EP 442 (591)
T ss_dssp HHHHHHHHHHHHHHTTC----HHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHSCSSCCTTHHHHHHTTTTCC-SH
T ss_pred HHHHHHHHHHHHHHHhC----hhHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHCcchHHHHHHHHHHHHHhcc-CH
Confidence 99999999999988654 344567788899999999999999999999999887652 456777888886432 47
Q ss_pred hHHHHHHHHHHHHhccCCCCCChhhhHHHHHhhcCCCChHHHHHHHHHHHHHHHHcCh
Q 000156 988 EGRKDLFDWLSKQLTGLSGFPDAAHLLKPASIAMTDKSSDVRKAAEACIVEILRAGGQ 1045 (2015)
Q Consensus 988 ~~R~~~l~~L~~~l~~~~~~~~~~~ll~pl~~~L~D~~~~VR~aA~~~L~~l~~~~G~ 1045 (2015)
.+|..++ |+..-+... ..+....+..++..+.+.++.||..+..++..+....+.
T Consensus 443 ~~~~~~~-wilGey~~~--~~~~~~~l~~l~~~~~~~~~~vr~~~l~a~~Kl~~~~p~ 497 (591)
T 2vgl_B 443 DARAAMI-WIVGEYAER--IDNADELLESFLEGFHDESTQVQLTLLTAIVKLFLKKPS 497 (591)
T ss_dssp HHHHHHH-HHHHTTCTT--CTTHHHHHHHHSTTCSSSCHHHHHHHHHHHHHHHTTCCS
T ss_pred HHHHHHH-HHHHccccc--ccCHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHhcCch
Confidence 7766554 543322221 123456777788888899999999999999988877654
No 22
>2vgl_B AP-2 complex subunit beta-1; cytoplasmic vesicle, alternative splicing, endocytosis, lipid-binding, golgi apparatus, adaptor, membrane, transport; HET: IHP; 2.59A {Homo sapiens} SCOP: i.23.1.1 PDB: 2jkt_B 2jkr_B* 2xa7_B 1w63_B
Probab=99.24 E-value=1.2e-08 Score=134.99 Aligned_cols=493 Identities=13% Similarity=0.147 Sum_probs=312.4
Q ss_pred hhhhhhccCChHHHHHHHHHHHHHh-cCCCCCCCChHHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHhhhcchhhhHhH
Q 000156 289 GFWEGVKATKWSERKDAVAELTKLA-STKRIAPGDFTEVCRTLKKLITDVNIAVAVEAIQAIGNLARGLRTHFSGSSRFL 367 (2015)
Q Consensus 289 ~f~~~l~s~kWkeR~eaL~~L~~l~-~~~ki~~~~y~~l~~~L~k~l~D~N~~V~~~A~~~l~~La~~L~~~f~~~~~~l 367 (2015)
++-+.+.+.+=..|++++..+..+. .+. +...++..+.+.+.+.+..+...+..++..+++.- ...+..+
T Consensus 17 ~i~~~L~~~~~~~k~~~~~kli~~~~~G~-----d~~~~~~~vi~l~~s~~~~~Krl~yl~l~~~~~~~----~e~~~l~ 87 (591)
T 2vgl_B 17 ELKAELNNEKKEKRKEAVKKVIAAMTVGK-----DVSSLFPDVVNCMQTDNLELKKLVYLYLMNYAKSQ----PDMAIMA 87 (591)
T ss_dssp HHHHHTTSSCHHHHHHHHHHHHHHHHTTC-----CCGGGHHHHHHTTSSSCHHHHHHHHHHHHHHHHHS----HHHHHTT
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHCCC-----ChHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcccC----chHHHHH
Confidence 4556677888889999999887654 333 23334444556788999999888888888877641 2235667
Q ss_pred HHHHHHHhccCcHHHHHHHHHHHHHHHHhcCCChHhHHHHHHHHhhcCChHHHHHHHHHHHHHHHhcChhHHHHhhhhHH
Q 000156 368 LPVLLEKLKEKKPTVAESLTQTLQAMHKAGCLNLVDVVEDVKTSVKNKVPLVRSLTLNWVTFCIETSSKAAVLKVHKDYV 447 (2015)
Q Consensus 368 lp~LL~klkdkk~~V~~aa~~aL~al~~~~~~~l~~il~~l~~~L~~Knp~vR~~~l~~L~~~l~~~~~~~l~~~l~~l~ 447 (2015)
++.+.+-+.++++.+|..|..+|..+.. ..-.+.+++.+..++.+.+|.||..++..+.++....+. .+.. ..++
T Consensus 88 ~n~l~kdL~~~n~~ir~~AL~~L~~i~~--~~~~~~l~~~l~~~L~d~~~~VRk~A~~al~~i~~~~p~-~~~~--~~~~ 162 (591)
T 2vgl_B 88 VNSFVKDCEDPNPLIRALAVRTMGCIRV--DKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLHDINAQ-MVED--QGFL 162 (591)
T ss_dssp HHHHGGGSSSSSHHHHHHHHHHHHTCCS--GGGHHHHHHHHHHHSSCSCHHHHHHHHHHHHHHHHSSCC-CHHH--HHHH
T ss_pred HHHHHHHcCCCCHHHHHHHHHHHHcCCh--HHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHhhChh-hccc--ccHH
Confidence 7888889999999999877555543321 112345677788999999999999999999998875443 2211 3588
Q ss_pred HHHHHHhcCCCHHHHHHHHHHHHHHHHHhCch--------HHHHHHHhc---cHHHHHHHHHHHhcCCCCCCCCCCCccc
Q 000156 448 PICMECLNDGTPEVRDAAFSVLAAIAKSVGMR--------PLERSIEKL---DDVRRNKLSEMIAGSGGDVATGTSSARV 516 (2015)
Q Consensus 448 p~l~k~L~Ds~~~VR~aA~~al~~l~~~~Ge~--------~~~~~l~~L---d~~~~kkI~e~~~~~~~~~~~~~~~~~~ 516 (2015)
+.+..+|+|.++.||.+|..+|..+...-++. .+..++..| ++-.+-++-+.+...
T Consensus 163 ~~l~~lL~d~d~~V~~~A~~aL~~i~~~~~~~~~~~l~~~~~~~Ll~~l~~~~~~~q~~il~~l~~l------------- 229 (591)
T 2vgl_B 163 DSLRDLIADSNPMVVANAVAALSEISESHPNSNLLDLNPQNINKLLTALNECTEWGQIFILDCLSNY------------- 229 (591)
T ss_dssp HHHHHTTSCSCHHHHHHHHHHHHHHTTSCCSCCSCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHTS-------------
T ss_pred HHHHHHhCCCChhHHHHHHHHHHHHHhhCCCccchhccHHHHHHHHHcCCCCCchHHHHHHHHHHHh-------------
Confidence 99999999999999999999998877654321 133333322 222222222222111
Q ss_pred cCCCCCCCCCCCCcccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcCCCCCCCCCCCCCCCCCHHHHHH
Q 000156 517 QTSGGSVPSVEASESSFVRKSAASMLSGKRPVSAAPASKKGGPVKPSAKKDGSGKQETSKLTEAPEDVEPSEMSLEEIES 596 (2015)
Q Consensus 517 ~~~~~s~~~~~~~~~~~~~~~~~s~~~~~~P~~~~~~~~k~~~~k~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~ee~e~ 596 (2015)
.| ..+++...
T Consensus 230 -----------------------------~~-----------------------------------------~~~~~~~~ 239 (591)
T 2vgl_B 230 -----------------------------NP-----------------------------------------KDDREAQS 239 (591)
T ss_dssp -----------------------------CC-----------------------------------------CSHHHHHH
T ss_pred -----------------------------CC-----------------------------------------CChHHHHH
Confidence 00 01122222
Q ss_pred HhhccCcHHHHhhhccCCHHHHHHHHHHHHHHHHhc--c-ccch-HHHHHHHHHhcCCCCcccHHHHHHHHHHHHHHHHH
Q 000156 597 RLGSLIPADTVGQLKSAVWKERLEAISSLRQQVEAV--Q-NLDQ-SVEILVRLVCMLPGWSEKNVQVQQQVIEVINYLAA 672 (2015)
Q Consensus 597 ~~~~ll~~~l~~~L~s~~Wk~Rl~a~e~L~~~v~~~--~-~~~~-~~~~Lv~~L~~~pg~~DsN~qV~~~~Le~l~~l~~ 672 (2015)
.+ +.+...|.|.++..|.+|+..+..+.... + +... ..+.+...|.. +.+++..|+-.+++.+..++.
T Consensus 240 ~l-----~~l~~~l~~~~~~V~~ea~~~i~~l~~~~~~~~~~~~~~~~~~~~~L~~---L~~~d~~vr~~aL~~l~~i~~ 311 (591)
T 2vgl_B 240 IC-----ERVTPRLSHANSAVVLSAVKVLMKFLELLPKDSDYYNMLLKKLAPPLVT---LLSGEPEVQYVALRNINLIVQ 311 (591)
T ss_dssp HH-----HHHTTCSCSSTTHHHHHHHHHHHHSCCSCCBTTBSHHHHHHHTHHHHHH---HTTSCHHHHHHHHHHHHHHHH
T ss_pred HH-----HHHHHHHcCCChHHHHHHHHHHHHHhhccCCCHHHHHHHHHHHHHHHHH---HhcCCccHHHHHHHHHHHHHH
Confidence 22 45566788999999999999888664321 1 1111 11112221111 112344578889999999988
Q ss_pred HcCCCchhHHHHHHHHHHhhhcc-hhhhHHHHHHHHHHHhhhChhHHHHHHHHHhhhCCChhHHHHHHHHHHHHHHHhCC
Q 000156 673 TATKFPKKCVVLCLLGISERVAD-IKTRAHAMKCLTTFSEAVGPGFIFERLYKIMKDHKNPKVLSEGILWMVSAVEDFGV 751 (2015)
Q Consensus 673 ~~~~~~~~~~~~il~~LveKlgD-~K~r~~a~~~L~~l~e~~~~~~Vl~~L~~~l~~~KnpKv~~~~l~~L~~li~~fG~ 751 (2015)
..++.....+. .++-...| ..+|..+.++|..++.....+.++.++..++ ...++.++.+++.+|..+...|..
T Consensus 312 ~~p~~~~~~~~----~~~~~~~d~~~Ir~~al~~L~~l~~~~nv~~iv~~L~~~l-~~~d~~~r~~~v~aI~~la~~~~~ 386 (591)
T 2vgl_B 312 KRPEILKQEIK----VFFVKYNDPIYVKLEKLDIMIRLASQANIAQVLAELKEYA-TEVDVDFVRKAVRAIGRCAIKVEQ 386 (591)
T ss_dssp HCCSTTTTCTT----TTSCCTTSCHHHHHHHHHHHHHTCCSSTHHHHHHHHHHHT-TSSCHHHHHHHHHHHHHHHTTCHH
T ss_pred hChHHHHHHHH----hheeccCChHHHHHHHHHHHHHHCChhhHHHHHHHHHHHH-hcCCHHHHHHHHHHHHHHHHhChh
Confidence 76654332221 11222233 3578888888888887766777888888876 567899999999999998876532
Q ss_pred CCCChhhHHHHHHhcCCCCCchhHHHHHHHHHHHHHHHhChhHHhhhhhccHHHHHHHHHHHhcCCCCCCCCCcccccCc
Q 000156 752 SHLKLKDLIDFCKDTGLQSSAAATRNATIKLLGALHKFVGPDIKGFLADVKPALLSALDAEYEKNPFEGTVVPKKTVRAS 831 (2015)
Q Consensus 752 ~~l~~k~li~~l~~~gL~~sn~~VR~aA~~ll~~Ly~~~G~~l~~~L~~lkp~ll~~Le~ef~k~~~~~~p~p~R~~r~~ 831 (2015)
....+++.+..+ +.+.+..|+..++..+..+.+..... .
T Consensus 387 ---~~~~~v~~Ll~l-l~~~~~~v~~e~i~~l~~ii~~~p~~--------~----------------------------- 425 (591)
T 2vgl_B 387 ---SAERCVSTLLDL-IQTKVNYVVQEAIVVIRDIFRKYPNK--------Y----------------------------- 425 (591)
T ss_dssp ---HHHHHHHHHHHH-HHTCCHHHHHHHHHHHHHHHHHSCSS--------C-----------------------------
T ss_pred ---HHHHHHHHHHHH-HcccchHHHHHHHHHHHHHHHHCcch--------H-----------------------------
Confidence 234577777777 88888888888877666554322100 0
Q ss_pred cccCCCCCCCCCCCCCcccccccchHHHHhcCC-CChHHHHHHHHHHHHHHHhccccCCCCChhhHHHHHHhccccchHH
Q 000156 832 ESTSSVSSGGSDGLPREDISGKFTPTLVKSLES-PDWKVRLESIEAVNKILEEANKRIQPAGTGELFGGLRGRLYDSNKN 910 (2015)
Q Consensus 832 ~~~~s~~~~~~d~lprvdIs~~L~~~ll~~l~d-~~Wk~R~eale~L~~ll~~a~~~I~~~~~~eL~~~L~~rL~DsN~~ 910 (2015)
..+...+.+.+.+ .....|..++-.|++.. ..+. + -.+++..|..++.+.+..
T Consensus 426 --------------------~~~v~~L~~~l~~~~~~~~~~~~~wilGey~----~~~~-~-~~~~l~~l~~~~~~~~~~ 479 (591)
T 2vgl_B 426 --------------------ESIIATLCENLDSLDEPDARAAMIWIVGEYA----ERID-N-ADELLESFLEGFHDESTQ 479 (591)
T ss_dssp --------------------CTTHHHHHHTTTTCCSHHHHHHHHHHHHTTC----TTCT-T-HHHHHHHHSTTCSSSCHH
T ss_pred --------------------HHHHHHHHHHHHhccCHHHHHHHHHHHHccc----cccc-C-HHHHHHHHHHhhccCCHH
Confidence 0012234444432 34555666655555432 2222 2 367888888888888999
Q ss_pred HHHHHHHHHHHHHHHhChhhHHhhhHHHHHHHHHh-CC-CcHHHHHHHHHHHHH
Q 000156 911 LVMATLITLGAVASAMGPAVEKSSKGVLSDILKCL-GD-NKKHMRECTLTVLDA 962 (2015)
Q Consensus 911 V~~~Al~~l~~La~alg~~f~~~~~~llp~ll~~L-~D-~k~~Vr~aa~~aL~~ 962 (2015)
|+..++.++..+........ ...+..++..+ .| ....||+-|...+.-
T Consensus 480 vr~~~l~a~~Kl~~~~p~~~----~~~i~~ll~~~~~d~~d~evrdRA~~y~~l 529 (591)
T 2vgl_B 480 VQLTLLTAIVKLFLKKPSET----QELVQQVLSLATQDSDNPDLRDRGYIYWRL 529 (591)
T ss_dssp HHHHHHHHHHHHHTTCCSTT----HHHHHHHHHHHHTTCCCHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHhcCchHH----HHHHHHHHHHhhhcCCChHHHHHHHHHHHH
Confidence 99999999888886543322 24555566654 45 566788887655543
No 23
>2jdq_A Importin alpha-1 subunit; transport, PB2 subunit, nuclear protein, protein transport, armadillo repeats; 2.2A {Homo sapiens} PDB: 3tj3_A
Probab=99.17 E-value=4.1e-09 Score=133.91 Aligned_cols=391 Identities=11% Similarity=0.046 Sum_probs=262.4
Q ss_pred hhhhcCC-----ChhhhhcCCChHHHHHHHHHHHHHhhccCCCC-chHHH--hhhhhhHhhhcCC-cHHHHHHHHHHHHH
Q 000156 8 LKEAKKL-----PWEDRLLHKNWKVRNEANIDLAALCDSITDPK-DNRIR--ELGPLFKKTVADS-NAPVQDKALDALIA 78 (2015)
Q Consensus 8 ~~~~~~l-----pl~erl~~k~WK~R~~ayeeL~~~~~~~~d~~-~~~~~--~~~~~~~k~v~Ds-N~~vqe~~leal~~ 78 (2015)
..+|... ++.+.+.|.+...|..|...|.+.+....++. ...+. ...+.+.+++.+. |+.+|..++.+|..
T Consensus 12 ~~~w~~~~~~l~~l~~~l~s~~~~~r~~A~~~L~~l~~~~~~~~~~~~~~~~~~i~~L~~~L~~~~~~~v~~~a~~~L~~ 91 (450)
T 2jdq_A 12 NMEMAPGGVITSDMIEMIFSKSPEQQLSATQKFRKLLSKEPNPPIDEVISTPGVVARFVEFLKRKENCTLQFESAWVLTN 91 (450)
T ss_dssp ----------CHHHHHHHHSSCHHHHHHHHHHHHHHHHSSSSCCHHHHHTSTTHHHHHHHHHTCTTCHHHHHHHHHHHHH
T ss_pred HHhhccccccHHHHHHHhcCCCHHHHHHHHHHHHHHhcCCCCCcHHHHHHcCCcHHHHHHHHCCCCCHHHHHHHHHHHHH
Confidence 3466655 36788999999999999999999875322221 11121 2345555677777 99999999999988
Q ss_pred HHHHhchhhhhh-HHHHHHHHHHhhcCCChhHHHHHHHHHHHHHhhhh--h-----hhHHHHHHHHhhc-CChhhHHHHH
Q 000156 79 YLKAADADAGRY-AKEVCDAIAAKCLTGRPKTVEKAQAVFMLWVELEA--V-----DVFLDVMEKAIKN-KVAKAVVPAI 149 (2015)
Q Consensus 79 ~l~~~~~~~~~~-~~~v~~~LieK~l~~k~~~k~~a~~~ll~~~E~~~--~-----~~v~~~L~~~~~~-KnpKv~~~~l 149 (2015)
+........... -..+++.|++-+-...+.+|+.|..++..+.+... . ..+++.|...+.+ .++.++..++
T Consensus 92 l~~~~~~~~~~~~~~~~i~~L~~lL~~~~~~vr~~a~~~L~~l~~~~~~~~~~~~~~~~i~~L~~~l~~~~~~~v~~~a~ 171 (450)
T 2jdq_A 92 IASGNSLQTRIVIQAGAVPIFIELLSSEFEDVQEQAVWALGNIAGDSTMCRDYVLDCNILPPLLQLFSKQNRLTMTRNAV 171 (450)
T ss_dssp HHSSCHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTCHHHHHHHTTSCCCHHHHHHHH
T ss_pred HhcCCHHHHHHHHhCCCHHHHHHHHcCCCHHHHHHHHHHHHHHccCCHHHHHHHHHCCCHHHHHHHhcCCCCHHHHHHHH
Confidence 875332211111 13477888776433688999999999888876421 1 2456677777774 7899999999
Q ss_pred HHHHHHHHHhCCC--CcChhHHHhhhhhhhcCCChhHHHHHHHHHHHHHHHhCCchhhHHHhhhChHHHHHHHHHHHHhc
Q 000156 150 DVMFQALSEFGAK--IIPPKRILKMLPELFDHQDQNVRASSKGLTLELCRWIGKDPVKTILFEKMRDTMKKELEVELVNV 227 (2015)
Q Consensus 150 ~~L~~~l~~fG~~--~i~~k~il~~l~~ll~~~d~~VR~~a~~l~~ely~~lG~~~l~~~l~~~Lk~~q~keLe~~f~k~ 227 (2015)
.+|..+....+.. ..-+..+++.|..++.+.|..||..+...+..+..... . . .+.+
T Consensus 172 ~~L~~l~~~~~~~~~~~~~~~~l~~L~~~l~~~~~~v~~~a~~~L~~l~~~~~-----~--------~-~~~~------- 230 (450)
T 2jdq_A 172 WALSNLCRGKSPPPEFAKVSPCLNVLSWLLFVSDTDVLADACWALSYLSDGPN-----D--------K-IQAV------- 230 (450)
T ss_dssp HHHHHHHCCSSSCCCGGGTGGGHHHHHHHTTCCCHHHHHHHHHHHHHHTSSSH-----H--------H-HHHH-------
T ss_pred HHHHHHhCCCCCCCCHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHCCCc-----H--------H-HHHH-------
Confidence 9998887543221 11236789999999999999999988766554432110 0 0 0000
Q ss_pred CCCCCCCccchhhhhHhhhhhccccCCCCCCCCCCCCCCCCCCCCCCCCCcccccccCcchhhhhhhccCChHHHHHHHH
Q 000156 228 SGTARPTRKIRAEQDKELGQELISEDVGPGPSEESTADVPPEIDEYELVDPVDILTPLEKSGFWEGVKATKWSERKDAVA 307 (2015)
Q Consensus 228 ~~~~~P~R~~rs~~~~~~~~ea~~~~~~~~~~~~~~~~~~~~iD~~dl~~~vdIl~kl~~~~f~~~l~s~kWkeR~eaL~ 307 (2015)
. . .+ + + +.+...+.+.+|..|..++.
T Consensus 231 --------------~---------~-~~-------------------------~---i--~~L~~ll~~~~~~v~~~a~~ 256 (450)
T 2jdq_A 231 --------------I---------D-AG-------------------------V---C--RRLVELLMHNDYKVVSPALR 256 (450)
T ss_dssp --------------H---------H-TT-------------------------T---H--HHHHHHTTCSCHHHHHHHHH
T ss_pred --------------H---------H-cC-------------------------c---H--HHHHHHHCCCchhHHHHHHH
Confidence 0 0 00 0 1 23555567788999999999
Q ss_pred HHHHHhcCCCCCCCCh--HHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHhhhcchhhh-HhHHHHHHHHhccCcHHHHH
Q 000156 308 ELTKLASTKRIAPGDF--TEVCRTLKKLITDVNIAVAVEAIQAIGNLARGLRTHFSGSS-RFLLPVLLEKLKEKKPTVAE 384 (2015)
Q Consensus 308 ~L~~l~~~~ki~~~~y--~~l~~~L~k~l~D~N~~V~~~A~~~l~~La~~L~~~f~~~~-~~llp~LL~klkdkk~~V~~ 384 (2015)
.|..++.+..-....+ ..+++.|...+.+.+..++..|+.+|+.|+.+-........ ..++|.|+..+.+....|+.
T Consensus 257 ~L~~l~~~~~~~~~~~~~~~~l~~L~~ll~~~~~~vr~~a~~~L~~l~~~~~~~~~~~~~~~~l~~L~~~l~~~~~~v~~ 336 (450)
T 2jdq_A 257 AVGNIVTGDDIQTQVILNCSALQSLLHLLSSPKESIKKEACWTISNITAGNRAQIQTVIDANIFPALISILQTAEFRTRK 336 (450)
T ss_dssp HHHHHTTSCHHHHHHHHTTTHHHHHHHHTTCSSHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHHHHHSCHHHHH
T ss_pred HHHHHhhCChHHHHHHHHCccHHHHHHHHcCCCHHHHHHHHHHHHHHHcCCHHHHHHHHHCCCHHHHHHHHhcCCHHHHH
Confidence 9998875321000000 13778888889988999999999999999864333333333 37899999999999999999
Q ss_pred HHHHHHHHHHHhcC-CCh-----HhHHHHHHHHhhcCChHHHHHHHHHHHHHHHhcChhH------HHHhhhhH-----H
Q 000156 385 SLTQTLQAMHKAGC-LNL-----VDVVEDVKTSVKNKVPLVRSLTLNWVTFCIETSSKAA------VLKVHKDY-----V 447 (2015)
Q Consensus 385 aa~~aL~al~~~~~-~~l-----~~il~~l~~~L~~Knp~vR~~~l~~L~~~l~~~~~~~------l~~~l~~l-----~ 447 (2015)
.+..+|..+...+. ... ..+++.|+..++++++.+|..++..|..++...+... ..++...+ +
T Consensus 337 ~a~~~L~~l~~~~~~~~~~~l~~~~~i~~L~~ll~~~~~~v~~~a~~aL~~l~~~~~~~~~~~~~~~~~~~~~l~~~g~~ 416 (450)
T 2jdq_A 337 EAAWAITNATSGGSAEQIKYLVELGCIKPLCDLLTVMDSKIVQVALNGLENILRLGEQEAKRNGTGINPYCALIEEAYGL 416 (450)
T ss_dssp HHHHHHHHHHHHCCHHHHHHHHHHTCHHHHHHGGGSSCHHHHHHHHHHHHHHHHHHHHHHHHSCSCCCHHHHHHHHHHCH
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHCCCHHHHHHHhcCCCHHHHHHHHHHHHHHHHhchhhhhccccchhHHHHHHHHcCcH
Confidence 99999999986411 011 2367888889999999999999999998876543211 11223333 5
Q ss_pred HHHHHHhcCCCHHHHHHHHHHHHHHH
Q 000156 448 PICMECLNDGTPEVRDAAFSVLAAIA 473 (2015)
Q Consensus 448 p~l~k~L~Ds~~~VR~aA~~al~~l~ 473 (2015)
+.+..++++.+.+||+.|..++..+.
T Consensus 417 ~~l~~l~~~~~~~v~~~a~~~l~~~~ 442 (450)
T 2jdq_A 417 DKIEFLQSHENQEIYQKAFDLIEHYF 442 (450)
T ss_dssp HHHHHHHCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHC
Confidence 67788889999999999988887555
No 24
>2iw3_A Elongation factor 3A; acetylation, ATP-binding, protein biosynthesis, nucleotide-binding, phosphorylation, RNA- binding, rRNA-binding; HET: ADP; 2.4A {Saccharomyces cerevisiae} PDB: 2iwh_A* 2ix3_A 2ix8_A
Probab=99.16 E-value=2.9e-10 Score=153.47 Aligned_cols=196 Identities=16% Similarity=0.202 Sum_probs=167.3
Q ss_pred hhhhhccCChHHHHHHHHHHHHHhcCCC-CCCCChHHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHh--hhcchhhhHh
Q 000156 290 FWEGVKATKWSERKDAVAELTKLASTKR-IAPGDFTEVCRTLKKLITDVNIAVAVEAIQAIGNLARGL--RTHFSGSSRF 366 (2015)
Q Consensus 290 f~~~l~s~kWkeR~eaL~~L~~l~~~~k-i~~~~y~~l~~~L~k~l~D~N~~V~~~A~~~l~~La~~L--~~~f~~~~~~ 366 (2015)
.++.+...+=.+|+++...+..++++.- ..... ..++..|++.+.|.+.. ..|+.+++.||+.. ...+++|+-.
T Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~k~~~--~~a~~~~~~~~~~~~~~~~~e~~~~~ 95 (986)
T 2iw3_A 19 LFQKLSVATADNRHEIASEVASFLNGNIIEHDVP-EHFFGELAKGIKDKKTA--ANAMQAVAHIANQSNLSPSVEPYIVQ 95 (986)
T ss_dssp HHHHHTTCCTTTHHHHHHHHHHHHTSSCSSSSCC-HHHHHHHHHHHTSHHHH--HHHHHHHHHHTCTTTCCTTTHHHHHT
T ss_pred HHhhccccchhHHHHHHHHHHHHHhccccccccc-hhHHHHHHHHHhccCCH--HHHHHHHHHHHHhcCCCCCcccchHH
Confidence 4455555556788999999988775332 22223 37999999999988766 89999999999655 4578999999
Q ss_pred HHHHHHHHhccCcHHHHHHHHHHHHHHHHh-cCCChHhHHHHHHHHhhcC-ChHHHHHHHHHHHHHHHhcChhHHHHhhh
Q 000156 367 LLPVLLEKLKEKKPTVAESLTQTLQAMHKA-GCLNLVDVVEDVKTSVKNK-VPLVRSLTLNWVTFCIETSSKAAVLKVHK 444 (2015)
Q Consensus 367 llp~LL~klkdkk~~V~~aa~~aL~al~~~-~~~~l~~il~~l~~~L~~K-np~vR~~~l~~L~~~l~~~~~~~l~~~l~ 444 (2015)
++|.+|+.++||...|++++..|+++++.. +...+..++|.|+.+|++. .|+.|.+++.++..+.... +.++...++
T Consensus 96 ~~~~~~~~~~dk~~~v~~aa~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~kw~~k~~~l~~~~~~~~~~-~~~~~~~~~ 174 (986)
T 2iw3_A 96 LVPAICTNAGNKDKEIQSVASETLISIVNAVNPVAIKALLPHLTNAIVETNKWQEKIAILAAFSAMVDAA-KDQVALRMP 174 (986)
T ss_dssp THHHHHHHTTCSSHHHHHHHHHHHHHHHHHSCGGGHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHS-HHHHHHHHH
T ss_pred HHHHHHHHhcCCchHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHHh-HHHHHHhcc
Confidence 999999999999999999999999999987 3334577899999999865 5999999999999988876 567788899
Q ss_pred hHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhCchHHHHHHHhcc
Q 000156 445 DYVPICMECLNDGTPEVRDAAFSVLAAIAKSVGMRPLERSIEKLD 489 (2015)
Q Consensus 445 ~l~p~l~k~L~Ds~~~VR~aA~~al~~l~~~~Ge~~~~~~l~~Ld 489 (2015)
+++|.+..|++|..++|.++|.+++..++.++++++++++++.|-
T Consensus 175 ~~~p~~~~~~~d~k~~v~~~~~~~~~~~~~~~~n~d~~~~~~~~~ 219 (986)
T 2iw3_A 175 ELIPVLSETMWDTKKEVKAAATAAMTKATETVDNKDIERFIPSLI 219 (986)
T ss_dssp HHHHHHHHHTTCSSHHHHHHHHHHHHHHGGGCCCTTTGGGHHHHH
T ss_pred chhcchHhhcccCcHHHHHHHHHHHHHHHhcCCCcchhhhHHHHH
Confidence 999999999999999999999999999999999999999998764
No 25
>2x19_B Importin-13; nuclear transport, protein transport; HET: GTP; 2.80A {Homo sapiens} PDB: 2xwu_B
Probab=99.14 E-value=2.4e-05 Score=109.58 Aligned_cols=593 Identities=12% Similarity=0.073 Sum_probs=323.2
Q ss_pred cCChHHHHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHhc-ccCHHHHHHHHHHHHHHHHHhhhcc----hhhhHhHHHH
Q 000156 296 ATKWSERKDAVAELTKLASTKRIAPGDFTEVCRTLKKLIT-DVNIAVAVEAIQAIGNLARGLRTHF----SGSSRFLLPV 370 (2015)
Q Consensus 296 s~kWkeR~eaL~~L~~l~~~~ki~~~~y~~l~~~L~k~l~-D~N~~V~~~A~~~l~~La~~L~~~f----~~~~~~llp~ 370 (2015)
+.+=..|++|-+.|..+-+.| ++-.+ +...+. +.+..|+..|+.++....+.--..+ ..+.+..+-.
T Consensus 36 ~~~~~~r~~A~~~L~~~~~~p-----~~~~~---~~~lL~~~~~~~vr~~aa~~L~~~i~~~w~~l~~~~~~~ir~~ll~ 107 (963)
T 2x19_B 36 DPNIENKNLAQKWLMQAQVSP-----QAWHF---SWQLLQPDKVPEIQYFGASALHIKISRYWSDIPTDQYESLKAQLFT 107 (963)
T ss_dssp CCCHHHHHHHHHHHHHHHHST-----THHHH---HHHHTSTTSCHHHHHHHHHHHHHHHHHCGGGSCGGGHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHhcCH-----HHHHH---HHHHhcCCCchHHHHHHHHHHHHHHHhCHHhCCHHHHHHHHHHHHH
Confidence 466778999999898876654 22222 222343 6678899999999988876432233 2233333333
Q ss_pred HHHHhccCcHHHHHHHHHHHHHHHHh-cCCChHhHHHHHHHHhhc-----CChHHHHHHHHHHHHHHHhcC---------
Q 000156 371 LLEKLKEKKPTVAESLTQTLQAMHKA-GCLNLVDVVEDVKTSVKN-----KVPLVRSLTLNWVTFCIETSS--------- 435 (2015)
Q Consensus 371 LL~klkdkk~~V~~aa~~aL~al~~~-~~~~l~~il~~l~~~L~~-----Knp~vR~~~l~~L~~~l~~~~--------- 435 (2015)
++.......+.|+..+..++..++.+ ......+++++|...+++ .++..+...+.+|..+.+...
T Consensus 108 ~l~~~~~~~~~ir~kl~~~la~i~~~~~p~~Wp~~l~~l~~~~~~~~~~~~~~~~~~~~l~iL~~l~ee~~~~~~~~~~r 187 (963)
T 2x19_B 108 QITRFASGSKIVLTRLCVALASLALSMMPDAWPCAVADMVRLFQAEDSPVDGQGRCLALLELLTVLPEEFQTSRLPQYRK 187 (963)
T ss_dssp HHHHTTTSCHHHHHHHHHHHHHHHHHHTTTTSTTHHHHHHHHHCC------CHHHHHHHHHHHHHHHHHHTTCCC-----
T ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHHhCccccchHHHHHHHHHhhhccCCCcHHHHHHHHHHHHhCHHHHhcccCcHHHH
Confidence 33333323588999999999999987 223456899999988865 266677788888877664220
Q ss_pred ---hhHHHHhhhhHHHHHHHHhcCCCH--HHHHHHHHHHHHHHHHhCchHH--HHHHHhcc---------HHHHHHHHHH
Q 000156 436 ---KAAVLKVHKDYVPICMECLNDGTP--EVRDAAFSVLAAIAKSVGMRPL--ERSIEKLD---------DVRRNKLSEM 499 (2015)
Q Consensus 436 ---~~~l~~~l~~l~p~l~k~L~Ds~~--~VR~aA~~al~~l~~~~Ge~~~--~~~l~~Ld---------~~~~kkI~e~ 499 (2015)
+..+...++.+++.+..++.+... .++.++.+|+..+.. +|.... .++++.+- ....+-+.+.
T Consensus 188 ~~~~~~l~~~~~~i~~ll~~~l~~~~~~~~~~~~~l~~l~~wi~-~~~~~~~~~~ll~~l~~~l~~~~~~~~a~~~l~~i 266 (963)
T 2x19_B 188 GLVRTSLAVECGAVFPLLEQLLQQPSSPSCVRQKVLKCFSSWVQ-LEVPLQDCEALIQAAFAALQDSELFDSSVEAIVNA 266 (963)
T ss_dssp ----CCSGGGHHHHHHHHHHHHSCTTCCHHHHHHHHHHHHHHHT-SSCCGGGTHHHHHHHHHHTTSTTTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHc-CCCCcccchHHHHHHHHHhCCchHHHHHHHHHHHH
Confidence 111234567788888888876543 489999999977665 554211 22222110 0011111111
Q ss_pred HhcCCCCCCCCCCCccccCCCCCCCCCCCCcccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcCCCCCC
Q 000156 500 IAGSGGDVATGTSSARVQTSGGSVPSVEASESSFVRKSAASMLSGKRPVSAAPASKKGGPVKPSAKKDGSGKQETSKLTE 579 (2015)
Q Consensus 500 ~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~s~~~~~~P~~~~~~~~k~~~~k~~~~~~~~~~~~~s~~~~ 579 (2015)
+.+. .+
T Consensus 267 ~~~~------------------------------------------~~-------------------------------- 272 (963)
T 2x19_B 267 ISQP------------------------------------------DA-------------------------------- 272 (963)
T ss_dssp HTCT------------------------------------------TG--------------------------------
T ss_pred Hccc------------------------------------------cc--------------------------------
Confidence 1100 00
Q ss_pred CCCCCCCCCCCHHHHHHHhhccCcHHHHhhhccCCHHHHHHHHHHHHHHHHh----c-------cccchHHHHHHHHHhc
Q 000156 580 APEDVEPSEMSLEEIESRLGSLIPADTVGQLKSAVWKERLEAISSLRQQVEA----V-------QNLDQSVEILVRLVCM 648 (2015)
Q Consensus 580 ~~~~~~~~~~s~ee~e~~~~~ll~~~l~~~L~s~~Wk~Rl~a~e~L~~~v~~----~-------~~~~~~~~~Lv~~L~~ 648 (2015)
+ ...-....+-..+..++ +.+...+...+-.....-.+-+..+.+. . +......+.++.+. .
T Consensus 273 -~----~~~~~~~~l~~~~~~~~-~~~~~~~~~~d~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~l~~ll~~~-~ 345 (963)
T 2x19_B 273 -Q----RYVNTLLKLIPLVLGLQ-EQLRQAVQNGDMETSHGICRIAVALGENHSRALLDQVEHWQSFLALVNMIMFCT-G 345 (963)
T ss_dssp -G----GCHHHHHHHHHHHHTTH-HHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHH-T
T ss_pred -c----cCHHHHHHHHHHHHhhH-HHHHHHHHCCCHHHHHHHHHHHHHHHHHhHHHHHcCccchHHHHHHHHHHHHHH-c
Confidence 0 00000001111111110 1111122222221111122222222111 0 00011123333332 3
Q ss_pred CCCCcccHHHHHHHHHHHHHHHHHHcCCC-----------chhHHHHHHHHHHhhhcc------------h-----hhhH
Q 000156 649 LPGWSEKNVQVQQQVIEVINYLAATATKF-----------PKKCVVLCLLGISERVAD------------I-----KTRA 700 (2015)
Q Consensus 649 ~pg~~DsN~qV~~~~Le~l~~l~~~~~~~-----------~~~~~~~il~~LveKlgD------------~-----K~r~ 700 (2015)
.|+.-+.+..|...++++|..+++....+ ....+..+++.++.++.- . ..|.
T Consensus 346 ~~~~~~~~~~v~~~~l~fw~~l~~~~~~~~~~~~~~~~~~~~~~l~~l~~~ll~~~~~p~~~~~~~~~~de~~~~~~~r~ 425 (963)
T 2x19_B 346 IPGHYPVNETTSSLTLTFWYTLQDDILSFEAEKQAVYQQVYRPVYFQLVDVLLHKAQFPSDEEYGFWSSDEKEQFRIYRV 425 (963)
T ss_dssp CSSCTTTTCGGGGGGHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCHHHHHTSCHHHHHHHHHHHH
T ss_pred CCCCCCchhhhhhhhHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHHHHcCCCcccccCCChhHHHHHHHHHH
Confidence 34321222235667788888877632211 123444556666666521 0 1366
Q ss_pred HHHHHHHHHHhhhChhHHHHHHHHHh---h----hCCChhHHHHHHHHHHHHHHHhCCCCCC-hhhHHHHHHhcCCCCCc
Q 000156 701 HAMKCLTTFSEAVGPGFIFERLYKIM---K----DHKNPKVLSEGILWMVSAVEDFGVSHLK-LKDLIDFCKDTGLQSSA 772 (2015)
Q Consensus 701 ~a~~~L~~l~e~~~~~~Vl~~L~~~l---~----~~KnpKv~~~~l~~L~~li~~fG~~~l~-~k~li~~l~~~gL~~sn 772 (2015)
.+.++|..++...+. .+++.+++.+ . .+.+|+.+.+++.++..+.+......-+ +..+++.+.. +.+.+
T Consensus 426 ~~~~~L~~~~~~~~~-~~l~~~~~~l~~~l~~~~~~~~w~~~eaal~al~~i~~~~~~~~~~~l~~l~~~l~~--l~~~~ 502 (963)
T 2x19_B 426 DISDTLMYVYEMLGA-ELLSNLYDKLGRLLTSSEEPYSWQHTEALLYGFQSIAETIDVNYSDVVPGLIGLIPR--ISISN 502 (963)
T ss_dssp HHHHHHHHHHHHHTH-HHHHHHHHHHHHHHHTCCCSCCHHHHHHHHHHHHHHTTSCCSSCCSHHHHHHHHGGG--SCCCS
T ss_pred HHHHHHHHHHHHccH-HHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHhhcCchhhHHHHHHHHHHHh--CCCCc
Confidence 778888888887763 3444443322 2 4578999999999998877654332111 3456665553 55578
Q ss_pred hhHHHHHHHHHHHHHHHhChhHHhhhhhccHHHHHHHHHHHhcCCCCCCCCCcccccCccccCCCCCCCCCCCCCccccc
Q 000156 773 AATRNATIKLLGALHKFVGPDIKGFLADVKPALLSALDAEYEKNPFEGTVVPKKTVRASESTSSVSSGGSDGLPREDISG 852 (2015)
Q Consensus 773 ~~VR~aA~~ll~~Ly~~~G~~l~~~L~~lkp~ll~~Le~ef~k~~~~~~p~p~R~~r~~~~~~s~~~~~~d~lprvdIs~ 852 (2015)
+.||..+..+++.+..+++..- .|+..
T Consensus 503 ~~vr~~~~~~l~~~~~~l~~~~-~~l~~---------------------------------------------------- 529 (963)
T 2x19_B 503 VQLADTVMFTIGALSEWLADHP-VMINS---------------------------------------------------- 529 (963)
T ss_dssp HHHHHHHHHHHHHTHHHHHHCH-HHHTT----------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHhCH-HHHHH----------------------------------------------------
Confidence 9999999999998887665321 12211
Q ss_pred ccchHHHHhcCCCChHHHHHHHHHHHHHHHhccccCCCCChhhHHHHHHhccc--cchHHHHHHHHHHHHHHHHHhC-hh
Q 000156 853 KFTPTLVKSLESPDWKVRLESIEAVNKILEEANKRIQPAGTGELFGGLRGRLY--DSNKNLVMATLITLGAVASAMG-PA 929 (2015)
Q Consensus 853 ~L~~~ll~~l~d~~Wk~R~eale~L~~ll~~a~~~I~~~~~~eL~~~L~~rL~--DsN~~V~~~Al~~l~~La~alg-~~ 929 (2015)
+.+.++..+.+ -++|..|...+..++..+...+.|. +.+++..|...+. +.....+...+++++.++.+++ ..
T Consensus 530 -vl~~l~~~l~~--~~V~~~A~~al~~l~~~~~~~l~p~-~~~il~~l~~~l~~~~~~~~~~~~~~eai~~i~~~~~~~~ 605 (963)
T 2x19_B 530 -VLPLVLHALGN--PELSVSSVSTLKKICRECKYDLPPY-AANIVAVSQDVLMKQIHKTSQCMWLMQALGFLLSALQVEE 605 (963)
T ss_dssp -THHHHHHHTTC--GGGHHHHHHHHHHHHHHTGGGCTTT-HHHHHHHHHHHHHTTCSCHHHHHHHHHHHHHHHTTSCHHH
T ss_pred -HHHHHHHHhCC--chHHHHHHHHHHHHHHHHHHHHHhh-HHHHHHHHHHHhccCCCChHHHHHHHHHHHHHHhcCCHHH
Confidence 22344444543 4677888999999998776677777 4888888887775 3456788889999999999887 77
Q ss_pred hHHhhhHHHHHHHHHhCC-----CcHHH---HHHHHHHHHHHHHhcCchhhHHHHHHHH--hcCCCChhHHHHHHHHHHH
Q 000156 930 VEKSSKGVLSDILKCLGD-----NKKHM---RECTLTVLDAWLAAVHLDKMVPYVTTAL--TDAKLGAEGRKDLFDWLSK 999 (2015)
Q Consensus 930 f~~~~~~llp~ll~~L~D-----~k~~V---r~aa~~aL~~i~~~~gl~~ll~~l~~~L--~~~k~~p~~R~~~l~~L~~ 999 (2015)
+.+|+..++++++..+.. ..+.. +....+||..+++.++...- ..+.+.- ...+ .+..+..+...+..
T Consensus 606 ~~~~~~~l~~~l~~~l~~~~~~~~~~~~~~~~~~~l~~l~~i~~~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 683 (963)
T 2x19_B 606 ILKNLHSLISPYIQQLEKLAEEIPNPSNKLAIVHILGLLSNLFTTLDISHH-EDDHEGPELRKLP-VPQGPNPVVVVLQQ 683 (963)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSSCSCHHHHHHHHHHHHHHHHHHHHCCSSCC-C----------------CCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHcCCCcc-cccccccccccCC-CCCCCCchHHHHHH
Confidence 889999999999877642 23333 33566777777777652100 0000000 0000 00000111112211
Q ss_pred HhccCCCCCChhhhHHHHHhhcCCCChHHHHHHHHHHHHHHHHcChhHHHHHh
Q 000156 1000 QLTGLSGFPDAAHLLKPASIAMTDKSSDVRKAAEACIVEILRAGGQETIEKNL 1052 (2015)
Q Consensus 1000 ~l~~~~~~~~~~~ll~pl~~~L~D~~~~VR~aA~~~L~~l~~~~G~~~~~~~l 1052 (2015)
+.+.+.-++.... .+.+|++.+..++..+...+|.+. .+++
T Consensus 684 ----------~~~~~~~~l~~~~-~~~~v~e~~~~~l~~~~~~~~~~~-~~~l 724 (963)
T 2x19_B 684 ----------VFQLIQKVLSKWL-NDAQVVEAVCAIFEKSVKTLLDDF-APMV 724 (963)
T ss_dssp ----------HHHHHHHHHHHHT-TCHHHHHHHHHHHHHHHHHSSSTT-GGGH
T ss_pred ----------HHHHHHHHHHhcc-CchHHHHHHHHHHHHHHHhhcccc-cccH
Confidence 1222333333332 345889999999999999988653 4445
No 26
>2x1g_F Cadmus; transport protein, developmental protein, mRNA processing, nuclear transport, mRNA splicing, mRNA transport; 3.35A {Drosophila melanogaster}
Probab=99.12 E-value=9.8e-07 Score=123.68 Aligned_cols=701 Identities=11% Similarity=0.079 Sum_probs=373.0
Q ss_pred cCCChhHHHHHHHHHHHHHhhhhhhhHHHHHHHHh-hcCChhhHHHHHHHHHHHHHHhCCCCcCh------hH-HHhhhh
Q 000156 103 LTGRPKTVEKAQAVFMLWVELEAVDVFLDVMEKAI-KNKVAKAVVPAIDVMFQALSEFGAKIIPP------KR-ILKMLP 174 (2015)
Q Consensus 103 l~~k~~~k~~a~~~ll~~~E~~~~~~v~~~L~~~~-~~KnpKv~~~~l~~L~~~l~~fG~~~i~~------k~-il~~l~ 174 (2015)
+++.+..|..|.+.|..+-+ .++ .+..+...+ .+.++.++..|...|.+.++..- ..++. |. ++..+.
T Consensus 17 ~~~d~~~r~~A~~~L~~~~~--~p~-~w~~~~~lL~~~~~~~vr~~aa~~L~~~i~~~w-~~l~~~~~~~ir~~ll~~l~ 92 (971)
T 2x1g_F 17 YRSNSQNQAITHEWLTDAEA--SPQ-AWQFSWQLMQLGKSQEVQFFGAITLHSKLMKHW-HEVPPENREELKQKILESIV 92 (971)
T ss_dssp HTSTTTC----CHHHHHTTT--STH-HHHHHHHHTCTTSCHHHHHHHHHHHHHHHHHCG-GGCCGGGHHHHHHHHHHHHH
T ss_pred cCCCHHHHHHHHHHHHHHHc--CHH-HHHHHHHHHhcCCcHHHHHHHHHHHHHHHHccH-hhCCHHHHHHHHHHHHHHHH
Confidence 34456677788777765432 232 222222222 35788999999999999887532 23432 22 444444
Q ss_pred hhhcCCChhHHHHHHHHHHHHHHHhCCchhhHHHhhhChHHHHHHHHHHHHhcCCCCCCCccchhhhhHhhhhhccccCC
Q 000156 175 ELFDHQDQNVRASSKGLTLELCRWIGKDPVKTILFEKMRDTMKKELEVELVNVSGTARPTRKIRAEQDKELGQELISEDV 254 (2015)
Q Consensus 175 ~ll~~~d~~VR~~a~~l~~ely~~lG~~~l~~~l~~~Lk~~q~keLe~~f~k~~~~~~P~R~~rs~~~~~~~~ea~~~~~ 254 (2015)
..- ...+.||.....++++|.++..+ .- .++ +.+|-..+..-. .|.
T Consensus 93 ~~~-~~~~~vr~kl~~~la~i~~~~~p-~W-----p~~----l~~l~~~~~~~~---~~~-------------------- 138 (971)
T 2x1g_F 93 RFA-GGPKIVLNRLCISLGAYIVHMLG-EW-----PGA----IEEVINTFQNQR---MPN-------------------- 138 (971)
T ss_dssp HHT-TSCHHHHHHHHHHHHHHHHHTTC-C---------------HHHHHHHHTC--------------------------
T ss_pred HhC-CCCHHHHHHHHHHHHHHHHHccc-cc-----cHH----HHHHHHHHhccc---ccc--------------------
Confidence 443 23689999999999999887664 11 111 122222221100 000
Q ss_pred CCCCCCCCCCCCCCCCC-CCCCCCcccccccCcchhhhhhhccCChHHHHHHHHHHHHHhcCCCCCCCChHHHHHHHHHH
Q 000156 255 GPGPSEESTADVPPEID-EYELVDPVDILTPLEKSGFWEGVKATKWSERKDAVAELTKLASTKRIAPGDFTEVCRTLKKL 333 (2015)
Q Consensus 255 ~~~~~~~~~~~~~~~iD-~~dl~~~vdIl~kl~~~~f~~~l~s~kWkeR~eaL~~L~~l~~~~ki~~~~y~~l~~~L~k~ 333 (2015)
++ +-...-...|+..++ ++.+... .. .|+..+. ..+. .....++..+...
T Consensus 139 ---------------~~~~~~~~~~l~iL~~l~-EEi~~~~-~~---~~r~~~~---~~l~------~~~~~vl~ll~~~ 189 (971)
T 2x1g_F 139 ---------------VSADVQLWIMLEVLTAIP-EEAQVIH-TS---VKRVVLR---AEIA------KRVQLVIHTVERY 189 (971)
T ss_dssp ----------------CHHHHHHHHHHHHHHHH-HHHHHCC-CS---SCHHHHH---HHHH------TTHHHHHHHHHHH
T ss_pred ---------------CCCHHHHHHHHHHHHHhH-HHHhccC-cH---HHHHHHH---HHHH------HHHHHHHHHHHHH
Confidence 00 000000123344443 2322111 11 2332222 1111 1245666666666
Q ss_pred hccc--C------HHHHHHHHHHHHHHHH--HhhhcchhhhHhHHHHHHHHhc----------------cCcHHHHHHHH
Q 000156 334 ITDV--N------IAVAVEAIQAIGNLAR--GLRTHFSGSSRFLLPVLLEKLK----------------EKKPTVAESLT 387 (2015)
Q Consensus 334 l~D~--N------~~V~~~A~~~l~~La~--~L~~~f~~~~~~llp~LL~klk----------------dkk~~V~~aa~ 387 (2015)
+.+. + ..+...+++|+..... .+... ....+++.++. +. +..+.+++++.
T Consensus 190 l~~~~~~~~~~~~~~~~~~al~~l~~~~~~~~ip~~---~~~~ll~~l~~-L~~~~~~~~~~~~~~~~~~~~~~~~~~a~ 265 (971)
T 2x1g_F 190 LKLQMNRVWDAEAYSNMNRAVKCVGTWIKNIGYTIE---GCVTITAVLLE-VVHKCYWPCIHAGDGCMTADENELAESCL 265 (971)
T ss_dssp HHHHTTSCCCHHHHHHHHHHHHHHHHHHHHSCCCGG---GHHHHHHHHHH-HHHHHHSSSCC---CCCCHHHHHHHHHHH
T ss_pred HhcccCCCCCccchhHHHHHHHHHHHHHhhCCcCcc---ccccHHHHHHh-hhhhhccccccccccccCcCCcHHHHHHH
Confidence 6522 1 2688889999998777 34333 44667777777 51 24678999999
Q ss_pred HHHHHHHHhcC-----CChHhHHHHHHH-------HhhcCCh---HHHHHHHHHHHHHHHhcChhH----------HHHh
Q 000156 388 QTLQAMHKAGC-----LNLVDVVEDVKT-------SVKNKVP---LVRSLTLNWVTFCIETSSKAA----------VLKV 442 (2015)
Q Consensus 388 ~aL~al~~~~~-----~~l~~il~~l~~-------~L~~Knp---~vR~~~l~~L~~~l~~~~~~~----------l~~~ 442 (2015)
+|+..++.... ..+..+++.+.. ++.++.. ......+.++..+.+.+.... ....
T Consensus 266 ~~l~~i~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (971)
T 2x1g_F 266 KTMVNIIIQPDCHNYPKTAFVLIKMFLDSLSEITKTEWKRENDNEDIIVHIYMLFVSSVERHSTLLLSGITSADPELSIL 345 (971)
T ss_dssp HHHHHHHHCSGGGGCHHHHHHHHHHHHHHHHHHHHHHSSSSCSCSHHHHHHHHHHHHHHHHTHHHHHHHHHTCCHHHHHH
T ss_pred HHHHHHHcCccccccHHHHHHHHHHHHHhHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHHHHHHHHhccCcccccHH
Confidence 99999987411 012334444433 2233342 566667777777665443211 1245
Q ss_pred hhhHHHHHHHHhcC-----CCHHHHHHHHHHHHHHHH-HhCc------h----HHHHHHHhccHHHHHHHHHHHhcCCCC
Q 000156 443 HKDYVPICMECLND-----GTPEVRDAAFSVLAAIAK-SVGM------R----PLERSIEKLDDVRRNKLSEMIAGSGGD 506 (2015)
Q Consensus 443 l~~l~p~l~k~L~D-----s~~~VR~aA~~al~~l~~-~~Ge------~----~~~~~l~~Ld~~~~kkI~e~~~~~~~~ 506 (2015)
+..+++.+..++.. .+.+|+..+.+....+.. .... . .+.+++..| +..++.+..-
T Consensus 346 l~~~l~~ll~~~~~~~~~~~~~~v~~~~l~fw~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l-------l~~l~~~~~~- 417 (971)
T 2x1g_F 346 VHRIVQEILHCTDKPGIYPVEESCSTMALAFWYMLQDEVFAMSNDEQKHKCWEYIKPLYAHL-------TRILVRKSEQ- 417 (971)
T ss_dssp HHHHHHHHHHHHHCSSCTTTTCTTHHHHHHHHHHHHHHHHC-------CHHHHHHHHHHHHH-------HHHHHHHTSC-
T ss_pred HHHHHHHHHHHHcCCCCCCcchhhhHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHH-------HHHHHHHhcC-
Confidence 67788888887743 578899999888777766 3220 1 122222222 2222222100
Q ss_pred CCCCCCCccccCCCCCCCCCCCCcccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcCCCCCCCCCCCCC
Q 000156 507 VATGTSSARVQTSGGSVPSVEASESSFVRKSAASMLSGKRPVSAAPASKKGGPVKPSAKKDGSGKQETSKLTEAPEDVEP 586 (2015)
Q Consensus 507 ~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~s~~~~~~P~~~~~~~~k~~~~k~~~~~~~~~~~~~s~~~~~~~~~~~ 586 (2015)
|.. . +.
T Consensus 418 -----p~~-----------~--------------------------------------------------------~~-- 423 (971)
T 2x1g_F 418 -----PDE-----------K--------------------------------------------------------SL-- 423 (971)
T ss_dssp -----CCT-----------T--------------------------------------------------------TT--
T ss_pred -----CCc-----------c--------------------------------------------------------cc--
Confidence 000 0 00
Q ss_pred CCCCHHH-------------HHHHhhccCc--------HHHHhhhcc-----CCHHHHHHHHHHHHHHHHhccc-cchHH
Q 000156 587 SEMSLEE-------------IESRLGSLIP--------ADTVGQLKS-----AVWKERLEAISSLRQQVEAVQN-LDQSV 639 (2015)
Q Consensus 587 ~~~s~ee-------------~e~~~~~ll~--------~~l~~~L~s-----~~Wk~Rl~a~e~L~~~v~~~~~-~~~~~ 639 (2015)
...+.+| +-..+..+++ +-+...|.+ .+|+.|.+++-.+..+.++... .....
T Consensus 424 ~~~d~~e~~~f~~~R~~~~~~l~~~~~~~~~~~l~~~~~~l~~~l~~~~~~~~~w~~~eaal~~l~~iae~~~~~~~~~l 503 (971)
T 2x1g_F 424 AKWSSDDLECFRCYRQDISDTFMYCYDVLNDYILEILAAMLDEAIADLQRHPTHWTKLEACIYSFQSVAEHFGGEEKRQI 503 (971)
T ss_dssp SCSCHHHHHHHHHHHHHHHHHHHHHHTTCTTHHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHHTTTC------CHH
T ss_pred cccCHhHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhccCCCCcHHHHHHHHHHHHHHHhhcChhhhHHH
Confidence 0000110 0000111222 122233333 7999999999999987665322 11233
Q ss_pred HHHHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHhhhcchhhhHHHHHHHHHHHhhhChhHHH
Q 000156 640 EILVRLVCMLPGWSEKNVQVQQQVIEVINYLAATATKFPKKCVVLCLLGISERVADIKTRAHAMKCLTTFSEAVGPGFIF 719 (2015)
Q Consensus 640 ~~Lv~~L~~~pg~~DsN~qV~~~~Le~l~~l~~~~~~~~~~~~~~il~~LveKlgD~K~r~~a~~~L~~l~e~~~~~~Vl 719 (2015)
..++..+...+. .|.+..|...++.++..+.+-..... ..+..+++.|+..+ |++++..|..++..+++.++..
T Consensus 504 ~~l~~~l~~l~~-~d~~~~vr~~a~~~l~~~~~~l~~~~-~~l~~vl~~l~~~l-~~~v~~~A~~al~~l~~~~~~~--- 577 (971)
T 2x1g_F 504 PRLMRVLAEIPY-EKLNVKLLGTALETMGSYCNWLMENP-AYIPPAINLLVRGL-NSSMSAQATLGLKELCRDCQLQ--- 577 (971)
T ss_dssp HHHHHHHHHSCT-TTSCHHHHHHHHHHHHHTHHHHC-----CHHHHHHHHHHHH-HSSCHHHHHHHHHHHHHHCHHH---
T ss_pred HHHHHHHHhcCc-cccCHHHHHHHHHHHHHHHHHHhcCH-HHHHHHHHHHHHHh-ChHHHHHHHHHHHHHHHHHHHh---
Confidence 444554432211 25688899999998888877554322 45666677777666 4667777777777777654321
Q ss_pred HHHHHHhhhCCChhHHHHHHHHHHHHHHHhCCCCCChhhHHHHHHhcCCCC--CchhHHHHHHHHHHHHHHHhC-hhHHh
Q 000156 720 ERLYKIMKDHKNPKVLSEGILWMVSAVEDFGVSHLKLKDLIDFCKDTGLQS--SAAATRNATIKLLGALHKFVG-PDIKG 796 (2015)
Q Consensus 720 ~~L~~~l~~~KnpKv~~~~l~~L~~li~~fG~~~l~~k~li~~l~~~gL~~--sn~~VR~aA~~ll~~Ly~~~G-~~l~~ 796 (2015)
+.+++ ..++..+..+ +.. .+..+|..+.++++.+...++ ....+
T Consensus 578 --l~p~~------------------------------~~ll~~l~~~-l~~~~~~~~~~~~~~~ai~~i~~~~~~~~~~~ 624 (971)
T 2x1g_F 578 --LKPYA------------------------------DPLLNACHAS-LNTGRMKNSDSVRLMFSIGKLMSLLRPEEIPK 624 (971)
T ss_dssp --HHHHH------------------------------HHHHHHHHHH-HHSTTSCHHHHHHHHHHHHHHHHTSCTTHHHH
T ss_pred --ccccH------------------------------HHHHHHHHHH-HcCCCCChHHHHHHHHHHHHHHHhCCHHHHHH
Confidence 11111 1222222222 332 345788888999999887766 44666
Q ss_pred hhhhccHHHHHHHHHHHhcCCCCCCCCCcccccCccccCCCCCCCCCCCCCcccccccchHHHHhcCCCChHHHHHHHHH
Q 000156 797 FLADVKPALLSALDAEYEKNPFEGTVVPKKTVRASESTSSVSSGGSDGLPREDISGKFTPTLVKSLESPDWKVRLESIEA 876 (2015)
Q Consensus 797 ~L~~lkp~ll~~Le~ef~k~~~~~~p~p~R~~r~~~~~~s~~~~~~d~lprvdIs~~L~~~ll~~l~d~~Wk~R~eale~ 876 (2015)
++..+-+.+++.++.-.+.... .++ +-....++++.
T Consensus 625 ~~~~ll~~l~~~l~~~~~~~~~------------------------------------~~~--------~~~~~~~~l~~ 660 (971)
T 2x1g_F 625 YLDIIVSPCFEELQAICQADSK------------------------------------TPA--------ARIRTIFRLNM 660 (971)
T ss_dssp HHHHHHHHHHHHHHHHHTC---------------------------------------CHH--------HHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhcCCC------------------------------------Chh--------hHHHHHHHHHH
Confidence 7766666666655543211000 000 00112234555
Q ss_pred HHHHHHhccccCC--------CC----ChhhHHHHHHhccccc--hHHHHHHHHHHHHHHHHHhChhhHHhhhHHHHHHH
Q 000156 877 VNKILEEANKRIQ--------PA----GTGELFGGLRGRLYDS--NKNLVMATLITLGAVASAMGPAVEKSSKGVLSDIL 942 (2015)
Q Consensus 877 L~~ll~~a~~~I~--------~~----~~~eL~~~L~~rL~Ds--N~~V~~~Al~~l~~La~alg~~f~~~~~~llp~ll 942 (2015)
|..++......+. +. ...++++.+...+.+. +..|...++.+++.++..+|..|.+|+..+++.++
T Consensus 661 L~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~l~~~~~~~~v~e~~~~~~~~~~~~~~~~~~p~l~~~~~~l~ 740 (971)
T 2x1g_F 661 ISTLFSSLNTDVDEQATDQPIVQPVLLVMQRTMPIFKRIAEMWVEEIDVLEAACSAMKHAITNLRSSFQPMLQDLCLFIV 740 (971)
T ss_dssp HHHHHHHHTC-------------CCHHHHHTTHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHC--CTHHHHHHHHHH
T ss_pred HHHHHhhcCCCcCcccccccCCCchHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHhhhhhccccHHHHHHHHH
Confidence 5555543211111 11 1356777777666443 55899999999999999999999999999999999
Q ss_pred HHhCCCcHHHHHHHHHHHHHHHHhcCch--------hhHHHH----HHHHhcC-----CCChhHHHHHHHHHHHHhccCC
Q 000156 943 KCLGDNKKHMRECTLTVLDAWLAAVHLD--------KMVPYV----TTALTDA-----KLGAEGRKDLFDWLSKQLTGLS 1005 (2015)
Q Consensus 943 ~~L~D~k~~Vr~aa~~aL~~i~~~~gl~--------~ll~~l----~~~L~~~-----k~~p~~R~~~l~~L~~~l~~~~ 1005 (2015)
..+..... ..+...+..++...|-+ .++..+ ...|... ...|+++.+.+.++...+...+
T Consensus 741 ~~~~~~~~---~~~l~l~~~~i~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~pd~~~~~f~ll~~~l~~~p 817 (971)
T 2x1g_F 741 ASFQTRCC---APTLEISKTAIVMFFKDEGCKPLMQQLLREFIQHSFKLFESTPEQNFSNISDTMETFFGCLTQIIKKIP 817 (971)
T ss_dssp HHCC--CC---HHHHHHHHHHHTTCCC-----HHHHHHHHHHHHHHHHHHTSCTTTHHHHTHHHHHHHHHHHHHHHHSSG
T ss_pred HHHhcCCc---hHHHHHHHHHHHHhCCCcchHHHHHHHHHHHHHHHHHHHhcccccCCccCchHHHHHHHHHHHHHHhCc
Confidence 88876432 34778888888877753 222221 1222211 1148899999999998887654
Q ss_pred C----CCC-hhhhHHHHHhhcCCCChHHHHHHHHHHHHHHHH
Q 000156 1006 G----FPD-AAHLLKPASIAMTDKSSDVRKAAEACIVEILRA 1042 (2015)
Q Consensus 1006 ~----~~~-~~~ll~pl~~~L~D~~~~VR~aA~~~L~~l~~~ 1042 (2015)
. .+. +..++...+.+|.-.+.++.+++..++..++..
T Consensus 818 ~~~~~s~~~l~~i~~~~~~~l~~~~~~~~~s~~~fl~~~i~~ 859 (971)
T 2x1g_F 818 QVLEDKTLAYDRLVFYAQRGMTLPESGAIRNSIQFLTHFVMQ 859 (971)
T ss_dssp GGGGCTTSCHHHHHHHHHHHHTSSCSSHHHHHHHHHHHHHHH
T ss_pred HHHcCCcccHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHhc
Confidence 3 233 555666666777666666777787777776655
No 27
>1wa5_B Importin alpha subunit; nuclear transport/complex, nuclear transport, exportin, RAN GTPase, protein transport; HET: GTP; 2.0A {Saccharomyces cerevisiae} SCOP: a.118.1.1 PDB: 1un0_A 2c1t_A 1bk5_A 1ee5_A 1bk6_A 1ee4_A
Probab=99.11 E-value=8.5e-09 Score=134.57 Aligned_cols=382 Identities=10% Similarity=0.057 Sum_probs=262.5
Q ss_pred hhhhhcCCChHHHHHHHHHHHHHhhccCCCCchHHH--hhhhhhHhhhcCC-cHHHHHHHHHHHHHHHHHhchhhhhhH-
Q 000156 16 WEDRLLHKNWKVRNEANIDLAALCDSITDPKDNRIR--ELGPLFKKTVADS-NAPVQDKALDALIAYLKAADADAGRYA- 91 (2015)
Q Consensus 16 l~erl~~k~WK~R~~ayeeL~~~~~~~~d~~~~~~~--~~~~~~~k~v~Ds-N~~vqe~~leal~~~l~~~~~~~~~~~- 91 (2015)
+.+.|.+.+|..|..|...|.+.+....++.-..+. ...+.+..++.+. |+.+|..++.+|..+...... ....+
T Consensus 92 lv~~L~s~~~~~~~~A~~~L~~ll~~~~~~~~~~~~~~g~i~~Lv~~L~~~~~~~v~~~A~~~L~~l~~~~~~-~~~~~~ 170 (530)
T 1wa5_B 92 MTQQLNSDDMQEQLSATVKFRQILSREHRPPIDVVIQAGVVPRLVEFMRENQPEMLQLEAAWALTNIASGTSA-QTKVVV 170 (530)
T ss_dssp HHHHHSCSSHHHHHHHHHHHHHHTCCSSSCSHHHHHHTTCHHHHHHTTSTTSCHHHHHHHHHHHHHHTTSCHH-HHHHHH
T ss_pred HHHHHcCCCHHHHHHHHHHHHHHhCCCCCccHHHHHHCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHhCCCHH-HHHHHH
Confidence 467788999999999999999987643222111121 2345566778886 999999999998877653211 11111
Q ss_pred -HHHHHHHHHhhcCCChhHHHHHHHHHHHHHhhh--hh-----hhHHHHHHHHhhcCChhhHHHHHHHHHHHHHHhCCCC
Q 000156 92 -KEVCDAIAAKCLTGRPKTVEKAQAVFMLWVELE--AV-----DVFLDVMEKAIKNKVAKAVVPAIDVMFQALSEFGAKI 163 (2015)
Q Consensus 92 -~~v~~~LieK~l~~k~~~k~~a~~~ll~~~E~~--~~-----~~v~~~L~~~~~~KnpKv~~~~l~~L~~~l~~fG~~~ 163 (2015)
...++.|+.-.-...+.+|+.|..++..++... .. ..+++.|...+.+.++.++..++.+|..+....+...
T Consensus 171 ~~g~i~~Lv~lL~~~~~~vr~~A~~aL~~l~~~~~~~~~~~~~~~~l~~L~~ll~~~~~~v~~~a~~~L~~L~~~~~~~~ 250 (530)
T 1wa5_B 171 DADAVPLFIQLLYTGSVEVKEQAIWALGNVAGDSTDYRDYVLQCNAMEPILGLFNSNKPSLIRTATWTLSNLCRGKKPQP 250 (530)
T ss_dssp HTTCHHHHHHHHHHCCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTCHHHHHHGGGSCCHHHHHHHHHHHHHHHCCSSSCC
T ss_pred HCCCHHHHHHHHcCCCHHHHHHHHHHHHHHhCCCccchHHHHHcCcHHHHHHHhccCCHHHHHHHHHHHHHHhCCCCCCC
Confidence 245667766533368899999999988887541 11 2456777888888899999999999988775432221
Q ss_pred --cChhHHHhhhhhhhcCCChhHHHHHHHHHHHHHHHhCCchhhHHHhhhChHHHHHHHHHHHHhcCCCCCCCccchhhh
Q 000156 164 --IPPKRILKMLPELFDHQDQNVRASSKGLTLELCRWIGKDPVKTILFEKMRDTMKKELEVELVNVSGTARPTRKIRAEQ 241 (2015)
Q Consensus 164 --i~~k~il~~l~~ll~~~d~~VR~~a~~l~~ely~~lG~~~l~~~l~~~Lk~~q~keLe~~f~k~~~~~~P~R~~rs~~ 241 (2015)
.-...+++.|..++.+.|..||..|..++..|.....+ ..+.+ ++
T Consensus 251 ~~~~~~~~l~~L~~lL~~~d~~v~~~a~~~L~~L~~~~~~--------------~~~~~---~~---------------- 297 (530)
T 1wa5_B 251 DWSVVSQALPTLAKLIYSMDTETLVDACWAISYLSDGPQE--------------AIQAV---ID---------------- 297 (530)
T ss_dssp CHHHHGGGHHHHHHHTTCCCHHHHHHHHHHHHHHHSSCHH--------------HHHHH---HH----------------
T ss_pred cHHHHHhHHHHHHHHHcCCCHHHHHHHHHHHHHHhCCCHH--------------HHHHH---Hh----------------
Confidence 12356899999999999999999988777665522100 00000 00
Q ss_pred hHhhhhhccccCCCCCCCCCCCCCCCCCCCCCCCCCcccccccCcchhhhhhhccCChHHHHHHHHHHHHHhcCCCCCCC
Q 000156 242 DKELGQELISEDVGPGPSEESTADVPPEIDEYELVDPVDILTPLEKSGFWEGVKATKWSERKDAVAELTKLASTKRIAPG 321 (2015)
Q Consensus 242 ~~~~~~ea~~~~~~~~~~~~~~~~~~~~iD~~dl~~~vdIl~kl~~~~f~~~l~s~kWkeR~eaL~~L~~l~~~~ki~~~ 321 (2015)
. .+ + +.+...+.+.+|..|..|+..|..++.+..-...
T Consensus 298 ------------~-------------------------~~---v--~~Lv~lL~~~~~~v~~~a~~~L~~l~~~~~~~~~ 335 (530)
T 1wa5_B 298 ------------V-------------------------RI---P--KRLVELLSHESTLVQTPALRAVGNIVTGNDLQTQ 335 (530)
T ss_dssp ------------T-------------------------TC---H--HHHHHGGGCSCHHHHHHHHHHHHHHTTSCHHHHH
T ss_pred ------------c-------------------------Cc---H--HHHHHHHCCCChhhHHHHHHHHHHHHcCCHHHHH
Confidence 0 00 1 2355556778899999999999988743210000
Q ss_pred C-h-HHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHhhhcchhhh-HhHHHHHHHHhccCcHHHHHHHHHHHHHHHHhcC
Q 000156 322 D-F-TEVCRTLKKLITDVNIAVAVEAIQAIGNLARGLRTHFSGSS-RFLLPVLLEKLKEKKPTVAESLTQTLQAMHKAGC 398 (2015)
Q Consensus 322 ~-y-~~l~~~L~k~l~D~N~~V~~~A~~~l~~La~~L~~~f~~~~-~~llp~LL~klkdkk~~V~~aa~~aL~al~~~~~ 398 (2015)
. + ..+++.|...+.+.+..++..|+.+|+.|+.+-......++ ..++|.|+..+.+....|+..+..+|..++..+.
T Consensus 336 ~~~~~~~l~~L~~lL~~~~~~vr~~A~~aL~~l~~~~~~~~~~~~~~~~l~~L~~lL~~~~~~v~~~a~~aL~~l~~~~~ 415 (530)
T 1wa5_B 336 VVINAGVLPALRLLLSSPKENIKKEACWTISNITAGNTEQIQAVIDANLIPPLVKLLEVAEYKTKKEACWAISNASSGGL 415 (530)
T ss_dssp HHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTCHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHcchHHHHHHHHcCCCHHHHHHHHHHHHHHHcCCHHHHHHHHHCCCHHHHHHHHhcCCHHHHHHHHHHHHHHHhcCC
Confidence 0 0 14677888889988999999999999999865333333332 3688999999999999999999999999987521
Q ss_pred C---Ch-----HhHHHHHHHHhhcCChHHHHHHHHHHHHHHHhcChh---------HHHHhh--hhHHHHHHHHhcCCCH
Q 000156 399 L---NL-----VDVVEDVKTSVKNKVPLVRSLTLNWVTFCIETSSKA---------AVLKVH--KDYVPICMECLNDGTP 459 (2015)
Q Consensus 399 ~---~l-----~~il~~l~~~L~~Knp~vR~~~l~~L~~~l~~~~~~---------~l~~~l--~~l~p~l~k~L~Ds~~ 459 (2015)
. .. ..+++.|+..+.+.++.++..++..|..++...... .+...+ ...++.|..+++|.++
T Consensus 416 ~~~~~~~~l~~~~~l~~L~~ll~~~~~~v~~~al~aL~~l~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~L~~L~~~~~~ 495 (530)
T 1wa5_B 416 QRPDIIRYLVSQGCIKPLCDLLEIADNRIIEVTLDALENILKMGEADKEARGLNINENADFIEKAGGMEKIFNCQQNEND 495 (530)
T ss_dssp TCTHHHHHHHHTTCHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHTCSSCHHHHHHHHTTHHHHHHGGGGCSCH
T ss_pred CcHHHHHHHHHCCCHHHHHHHHhCCCHHHHHHHHHHHHHHHHhhhhhhhcccccccHHHHHHHHcCcHHHHHHHHcCCCH
Confidence 1 00 136788888899999999999999999988754321 111111 1247788888999999
Q ss_pred HHHHHHHHHHHHHH
Q 000156 460 EVRDAAFSVLAAIA 473 (2015)
Q Consensus 460 ~VR~aA~~al~~l~ 473 (2015)
+|++.|..++..++
T Consensus 496 ~v~~~a~~il~~~~ 509 (530)
T 1wa5_B 496 KIYEKAYKIIETYF 509 (530)
T ss_dssp HHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHC
Confidence 99998888776554
No 28
>2jdq_A Importin alpha-1 subunit; transport, PB2 subunit, nuclear protein, protein transport, armadillo repeats; 2.2A {Homo sapiens} PDB: 3tj3_A
Probab=99.07 E-value=4.2e-09 Score=133.82 Aligned_cols=377 Identities=12% Similarity=0.083 Sum_probs=252.0
Q ss_pred cHHHHhhhccCCHHHHHHHHHHHHHHHHh-cc-ccc------hHHHHHHHHHhcCCCCccc-HHHHHHHHHHHHHHHHHH
Q 000156 603 PADTVGQLKSAVWKERLEAISSLRQQVEA-VQ-NLD------QSVEILVRLVCMLPGWSEK-NVQVQQQVIEVINYLAAT 673 (2015)
Q Consensus 603 ~~~l~~~L~s~~Wk~Rl~a~e~L~~~v~~-~~-~~~------~~~~~Lv~~L~~~pg~~Ds-N~qV~~~~Le~l~~l~~~ 673 (2015)
-+.+++.|.+.+...|..|+..|..++.. .. ... .....+++.| ++. +..|+..++.+|..++..
T Consensus 22 l~~l~~~l~s~~~~~r~~A~~~L~~l~~~~~~~~~~~~~~~~~~i~~L~~~L------~~~~~~~v~~~a~~~L~~l~~~ 95 (450)
T 2jdq_A 22 TSDMIEMIFSKSPEQQLSATQKFRKLLSKEPNPPIDEVISTPGVVARFVEFL------KRKENCTLQFESAWVLTNIASG 95 (450)
T ss_dssp CHHHHHHHHSSCHHHHHHHHHHHHHHHHSSSSCCHHHHHTSTTHHHHHHHHH------TCTTCHHHHHHHHHHHHHHHSS
T ss_pred HHHHHHHhcCCCHHHHHHHHHHHHHHhcCCCCCcHHHHHHcCCcHHHHHHHH------CCCCCHHHHHHHHHHHHHHhcC
Confidence 36788899999999999999999998753 11 111 1234455554 333 778889999999888752
Q ss_pred cCCCchhHH-HHHHHHHHhhhcc--hhhhHHHHHHHHHHHhhhCh-------hHHHHHHHHHhhhCCChhHHHHHHHHHH
Q 000156 674 ATKFPKKCV-VLCLLGISERVAD--IKTRAHAMKCLTTFSEAVGP-------GFIFERLYKIMKDHKNPKVLSEGILWMV 743 (2015)
Q Consensus 674 ~~~~~~~~~-~~il~~LveKlgD--~K~r~~a~~~L~~l~e~~~~-------~~Vl~~L~~~l~~~KnpKv~~~~l~~L~ 743 (2015)
........+ ..++|.|+.-+.+ ..+|..|..+|..++..... .-+++.++..+....++.++..++..|.
T Consensus 96 ~~~~~~~~~~~~~i~~L~~lL~~~~~~vr~~a~~~L~~l~~~~~~~~~~~~~~~~i~~L~~~l~~~~~~~v~~~a~~~L~ 175 (450)
T 2jdq_A 96 NSLQTRIVIQAGAVPIFIELLSSEFEDVQEQAVWALGNIAGDSTMCRDYVLDCNILPPLLQLFSKQNRLTMTRNAVWALS 175 (450)
T ss_dssp CHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTCHHHHHHHTTSCCCHHHHHHHHHHHH
T ss_pred CHHHHHHHHhCCCHHHHHHHHcCCCHHHHHHHHHHHHHHccCCHHHHHHHHHCCCHHHHHHHhcCCCCHHHHHHHHHHHH
Confidence 111111111 2467888877765 57899999999998864311 1235566666543578999999999999
Q ss_pred HHHHHhCCC--CCChhhHHHHHHhcCCCCCchhHHHHHHHHHHHHHHHhChhHHhhhhhccHHHHHHHHHHHhcCCCCCC
Q 000156 744 SAVEDFGVS--HLKLKDLIDFCKDTGLQSSAAATRNATIKLLGALHKFVGPDIKGFLADVKPALLSALDAEYEKNPFEGT 821 (2015)
Q Consensus 744 ~li~~fG~~--~l~~k~li~~l~~~gL~~sn~~VR~aA~~ll~~Ly~~~G~~l~~~L~~lkp~ll~~Le~ef~k~~~~~~ 821 (2015)
.+....+.. ..-+..+++.+..+ +.+.++.||..|..++..|.....+ ....+. +
T Consensus 176 ~l~~~~~~~~~~~~~~~~l~~L~~~-l~~~~~~v~~~a~~~L~~l~~~~~~------------~~~~~~----~------ 232 (450)
T 2jdq_A 176 NLCRGKSPPPEFAKVSPCLNVLSWL-LFVSDTDVLADACWALSYLSDGPND------------KIQAVI----D------ 232 (450)
T ss_dssp HHHCCSSSCCCGGGTGGGHHHHHHH-TTCCCHHHHHHHHHHHHHHTSSSHH------------HHHHHH----H------
T ss_pred HHhCCCCCCCCHHHHHHHHHHHHHH-HccCCHHHHHHHHHHHHHHHCCCcH------------HHHHHH----H------
Confidence 888543111 11135678888888 9999999999999988877532110 000000 0
Q ss_pred CCCcccccCccccCCCCCCCCCCCCCcccccccchHHHHhcCCCChHHHHHHHHHHHHHHHhccccCCCCChhhHHHHHH
Q 000156 822 VVPKKTVRASESTSSVSSGGSDGLPREDISGKFTPTLVKSLESPDWKVRLESIEAVNKILEEANKRIQPAGTGELFGGLR 901 (2015)
Q Consensus 822 p~p~R~~r~~~~~~s~~~~~~d~lprvdIs~~L~~~ll~~l~d~~Wk~R~eale~L~~ll~~a~~~I~~~~~~eL~~~L~ 901 (2015)
..+.+.++..+.+.+|.+|..++..|..+..........-.-..+++.|.
T Consensus 233 ------------------------------~~~i~~L~~ll~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~l~~L~ 282 (450)
T 2jdq_A 233 ------------------------------AGVCRRLVELLMHNDYKVVSPALRAVGNIVTGDDIQTQVILNCSALQSLL 282 (450)
T ss_dssp ------------------------------TTTHHHHHHHTTCSCHHHHHHHHHHHHHHTTSCHHHHHHHHTTTHHHHHH
T ss_pred ------------------------------cCcHHHHHHHHCCCchhHHHHHHHHHHHHhhCChHHHHHHHHCccHHHHH
Confidence 00335677888889999999999999988753111000000024788888
Q ss_pred hccccchHHHHHHHHHHHHHHHHHhChhhHHhh-hHHHHHHHHHhCCCcHHHHHHHHHHHHHHHHhcCc--------hhh
Q 000156 902 GRLYDSNKNLVMATLITLGAVASAMGPAVEKSS-KGVLSDILKCLGDNKKHMRECTLTVLDAWLAAVHL--------DKM 972 (2015)
Q Consensus 902 ~rL~DsN~~V~~~Al~~l~~La~alg~~f~~~~-~~llp~ll~~L~D~k~~Vr~aa~~aL~~i~~~~gl--------~~l 972 (2015)
..+.+.+..++..|+.+++.|+........... ..++|.++..|.+....||..|..+|..++..... ..+
T Consensus 283 ~ll~~~~~~vr~~a~~~L~~l~~~~~~~~~~~~~~~~l~~L~~~l~~~~~~v~~~a~~~L~~l~~~~~~~~~~~l~~~~~ 362 (450)
T 2jdq_A 283 HLLSSPKESIKKEACWTISNITAGNRAQIQTVIDANIFPALISILQTAEFRTRKEAAWAITNATSGGSAEQIKYLVELGC 362 (450)
T ss_dssp HHTTCSSHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHTC
T ss_pred HHHcCCCHHHHHHHHHHHHHHHcCCHHHHHHHHHCCCHHHHHHHHhcCCHHHHHHHHHHHHHHHcCCCHHHHHHHHHCCC
Confidence 999999999999999999998853322233333 36899999999999999999999999999875321 246
Q ss_pred HHHHHHHHhcCCCChhHHHHHHHHHHHHhccCCC--------CCChhhhH------HHHHhhcCCCChHHHHHHHHHHHH
Q 000156 973 VPYVTTALTDAKLGAEGRKDLFDWLSKQLTGLSG--------FPDAAHLL------KPASIAMTDKSSDVRKAAEACIVE 1038 (2015)
Q Consensus 973 l~~l~~~L~~~k~~p~~R~~~l~~L~~~l~~~~~--------~~~~~~ll------~pl~~~L~D~~~~VR~aA~~~L~~ 1038 (2015)
++.+...|.++ ++.+|..++..|...+..... ...+...+ ..+...+.+.+.+||+.|..++..
T Consensus 363 i~~L~~ll~~~--~~~v~~~a~~aL~~l~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~l~~l~~~~~~~v~~~a~~~l~~ 440 (450)
T 2jdq_A 363 IKPLCDLLTVM--DSKIVQVALNGLENILRLGEQEAKRNGTGINPYCALIEEAYGLDKIEFLQSHENQEIYQKAFDLIEH 440 (450)
T ss_dssp HHHHHHGGGSS--CHHHHHHHHHHHHHHHHHHHHHHHHSCSCCCHHHHHHHHHHCHHHHHHHHCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhcCC--CHHHHHHHHHHHHHHHHhchhhhhccccchhHHHHHHHHcCcHHHHHHHHcCCCHHHHHHHHHHHHH
Confidence 77888888765 578888877777654432110 01111222 235556688888999998887776
Q ss_pred HH
Q 000156 1039 IL 1040 (2015)
Q Consensus 1039 l~ 1040 (2015)
+.
T Consensus 441 ~~ 442 (450)
T 2jdq_A 441 YF 442 (450)
T ss_dssp HH
T ss_pred HC
Confidence 54
No 29
>2x19_B Importin-13; nuclear transport, protein transport; HET: GTP; 2.80A {Homo sapiens} PDB: 2xwu_B
Probab=99.07 E-value=3.3e-05 Score=108.03 Aligned_cols=354 Identities=13% Similarity=0.128 Sum_probs=202.7
Q ss_pred ccCCHHHHHHHHHHHHHHHHhccc-cchHHHHHHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHcCCCchhHHHHHHHHH
Q 000156 611 KSAVWKERLEAISSLRQQVEAVQN-LDQSVEILVRLVCMLPGWSEKNVQVQQQVIEVINYLAATATKFPKKCVVLCLLGI 689 (2015)
Q Consensus 611 ~s~~Wk~Rl~a~e~L~~~v~~~~~-~~~~~~~Lv~~L~~~pg~~DsN~qV~~~~Le~l~~l~~~~~~~~~~~~~~il~~L 689 (2015)
.+.+|+.|.+++-.++.+.++... .......++..+ +++.+.+..|...++.++..+.+.... ....+..+++.|
T Consensus 459 ~~~~w~~~eaal~al~~i~~~~~~~~~~~l~~l~~~l---~~l~~~~~~vr~~~~~~l~~~~~~l~~-~~~~l~~vl~~l 534 (963)
T 2x19_B 459 EPYSWQHTEALLYGFQSIAETIDVNYSDVVPGLIGLI---PRISISNVQLADTVMFTIGALSEWLAD-HPVMINSVLPLV 534 (963)
T ss_dssp CSCCHHHHHHHHHHHHHHTTSCCSSCCSHHHHHHHHG---GGSCCCSHHHHHHHHHHHHHTHHHHHH-CHHHHTTTHHHH
T ss_pred CCCchHHHHHHHHHHHHHHhhcCchhhHHHHHHHHHH---HhCCCCcHHHHHHHHHHHHHHHHHHHh-CHHHHHHHHHHH
Confidence 346899999999999987766332 222334444444 245556777888777777765543211 012333344444
Q ss_pred HhhhcchhhhHHHHHHHHHHHhhhChhHHHHHHHHHhhhCCChhHHHHHHHHHHHHHHHhCCCCCC-hhhHHHHHHhcCC
Q 000156 690 SERVADIKTRAHAMKCLTTFSEAVGPGFIFERLYKIMKDHKNPKVLSEGILWMVSAVEDFGVSHLK-LKDLIDFCKDTGL 768 (2015)
Q Consensus 690 veKlgD~K~r~~a~~~L~~l~e~~~~~~Vl~~L~~~l~~~KnpKv~~~~l~~L~~li~~fG~~~l~-~k~li~~l~~~gL 768 (2015)
+..+.+ |+|+..++..|..+++..+..-.+ +..++..+..+ +
T Consensus 535 ~~~l~~------------------------------------~~V~~~A~~al~~l~~~~~~~l~p~~~~il~~l~~~-l 577 (963)
T 2x19_B 535 LHALGN------------------------------------PELSVSSVSTLKKICRECKYDLPPYAANIVAVSQDV-L 577 (963)
T ss_dssp HHHTTC------------------------------------GGGHHHHHHHHHHHHHHTGGGCTTTHHHHHHHHHHH-H
T ss_pred HHHhCC------------------------------------chHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHH-h
Confidence 444444 445555555555554443321111 33455444443 4
Q ss_pred CC--CchhHHHHHHHHHHHHHHHhC-hhHHhhhhhccHHHHHHHHHHHhcCCCCCCCCCcccccCccccCCCCCCCCCCC
Q 000156 769 QS--SAAATRNATIKLLGALHKFVG-PDIKGFLADVKPALLSALDAEYEKNPFEGTVVPKKTVRASESTSSVSSGGSDGL 845 (2015)
Q Consensus 769 ~~--sn~~VR~aA~~ll~~Ly~~~G-~~l~~~L~~lkp~ll~~Le~ef~k~~~~~~p~p~R~~r~~~~~~s~~~~~~d~l 845 (2015)
.. .+..+|....++++.+...+| ....+|+..+-+.+...++.-.... .
T Consensus 578 ~~~~~~~~~~~~~~eai~~i~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~-----~----------------------- 629 (963)
T 2x19_B 578 MKQIHKTSQCMWLMQALGFLLSALQVEEILKNLHSLISPYIQQLEKLAEEI-----P----------------------- 629 (963)
T ss_dssp HTTCSCHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHHHSSC-----S-----------------------
T ss_pred ccCCCChHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhCC-----C-----------------------
Confidence 32 356788888888888887776 5566777666665555554432100 0
Q ss_pred CCcccccccchHHHHhcCCCChHHHHHHHHHHHHHHHhccccCC-----------------CC----ChhhHHHHHHhcc
Q 000156 846 PREDISGKFTPTLVKSLESPDWKVRLESIEAVNKILEEANKRIQ-----------------PA----GTGELFGGLRGRL 904 (2015)
Q Consensus 846 prvdIs~~L~~~ll~~l~d~~Wk~R~eale~L~~ll~~a~~~I~-----------------~~----~~~eL~~~L~~rL 904 (2015)
.++. -+.+...++.|..++........ +. .+..+++.+...+
T Consensus 630 ---------~~~~--------~~~~~~~l~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 692 (963)
T 2x19_B 630 ---------NPSN--------KLAIVHILGLLSNLFTTLDISHHEDDHEGPELRKLPVPQGPNPVVVVLQQVFQLIQKVL 692 (963)
T ss_dssp ---------CHHH--------HHHHHHHHHHHHHHHHHCCSSCCC---------------CCCHHHHHHHHHHHHHHHHH
T ss_pred ---------CHHH--------HHHHHHHHHHHHHHHHHcCCCcccccccccccccCCCCCCCCchHHHHHHHHHHHHHHH
Confidence 0000 01122334444444432211110 00 1234444444444
Q ss_pred cc--chHHHHHHHHHHHHHHHHHhChhhHHhhhHHHHHHHHHhCCCcHHHHHHHHHHHHHHHHhcCch----hhH----H
Q 000156 905 YD--SNKNLVMATLITLGAVASAMGPAVEKSSKGVLSDILKCLGDNKKHMRECTLTVLDAWLAAVHLD----KMV----P 974 (2015)
Q Consensus 905 ~D--sN~~V~~~Al~~l~~La~alg~~f~~~~~~llp~ll~~L~D~k~~Vr~aa~~aL~~i~~~~gl~----~ll----~ 974 (2015)
.. .+..+...++.+++.++..+|..|.+|+..+++.++..+..... ......+..++...+.+ ..+ .
T Consensus 693 ~~~~~~~~v~e~~~~~l~~~~~~~~~~~~~~l~~~~~~l~~~~~~~~~---~~~l~l~~~li~~f~~~~~~~~~~~~~l~ 769 (963)
T 2x19_B 693 SKWLNDAQVVEAVCAIFEKSVKTLLDDFAPMVPQLCEMLGRMYSTIPQ---ASALDLTRQLVHIFAHEPAHFPPIEALFL 769 (963)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHHHSSSTTGGGHHHHHHHHHHHHHHSCC---HHHHHHHHHHHHHHTTCTTTCHHHHHHHH
T ss_pred HhccCchHHHHHHHHHHHHHHHhhcccccccHHHHHHHHHHHHHcCCc---cHHHHHHHHHHHHhCCCcchHHHHHHHHH
Confidence 21 24578999999999999999999999999999988887754221 23455666676633322 122 2
Q ss_pred HHH----HHHh-cCCCChhHHHHHHHHHHHHhccCCC----CCC-hhhhHHHHHhhcCCCChHHHHHHHHHHHHHHHHcC
Q 000156 975 YVT----TALT-DAKLGAEGRKDLFDWLSKQLTGLSG----FPD-AAHLLKPASIAMTDKSSDVRKAAEACIVEILRAGG 1044 (2015)
Q Consensus 975 ~l~----~~L~-~~k~~p~~R~~~l~~L~~~l~~~~~----~~~-~~~ll~pl~~~L~D~~~~VR~aA~~~L~~l~~~~G 1044 (2015)
.+. ..+. +....|++|...+..+...+...+. .+. +..++..+..+|.+.+.+|-+++...+..+....+
T Consensus 770 ~~~~~~l~~~~~~~~~~pd~~~~~f~ll~~~~~~~~~~~~~~~~~~~~i~~~~~~~l~~~~~~~~~~~l~~l~~l~~~~~ 849 (963)
T 2x19_B 770 LVTSVTLTLFQQGPRDHPDIVDSFMQLLAQALKRKPDLFLCERLDVKAVFQCAVLALKFPEAPTVKASCGFFTELLPRCG 849 (963)
T ss_dssp HHHHHHHHHHHHCTTTCHHHHHHHHHHHHHHHHHCGGGGGCTTSCHHHHHHHHHHHTTCSCHHHHHHHHHHHHHHGGGTT
T ss_pred HHHHHHHHHHhhCcccCchHHHHHHHHHHHHHHhCcHHHcCCcccHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHhcCC
Confidence 222 2222 2111489999999999888876543 233 56666678888999999999999999998887765
Q ss_pred -hhHHHHHhc
Q 000156 1045 -QETIEKNLK 1053 (2015)
Q Consensus 1045 -~~~~~~~l~ 1053 (2015)
...+..++.
T Consensus 850 ~~~~~~~~~~ 859 (963)
T 2x19_B 850 EVESVGKVVQ 859 (963)
T ss_dssp SSCHHHHHTT
T ss_pred ChHHHHHHHH
Confidence 334444443
No 30
>2x1g_F Cadmus; transport protein, developmental protein, mRNA processing, nuclear transport, mRNA splicing, mRNA transport; 3.35A {Drosophila melanogaster}
Probab=99.06 E-value=1.4e-05 Score=111.92 Aligned_cols=603 Identities=11% Similarity=0.065 Sum_probs=306.2
Q ss_pred CChHHHHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHhc-ccCHHHHHHHHHHHHHHHHHhhhcch----hhhH-hHHHH
Q 000156 297 TKWSERKDAVAELTKLASTKRIAPGDFTEVCRTLKKLIT-DVNIAVAVEAIQAIGNLARGLRTHFS----GSSR-FLLPV 370 (2015)
Q Consensus 297 ~kWkeR~eaL~~L~~l~~~~ki~~~~y~~l~~~L~k~l~-D~N~~V~~~A~~~l~~La~~L~~~f~----~~~~-~llp~ 370 (2015)
.+=..|++|-+.|..+-+.| +....+..++. +.+..|+..|+.++....+.--..+. .+.+ .++..
T Consensus 19 ~d~~~r~~A~~~L~~~~~~p--------~~w~~~~~lL~~~~~~~vr~~aa~~L~~~i~~~w~~l~~~~~~~ir~~ll~~ 90 (971)
T 2x1g_F 19 SNSQNQAITHEWLTDAEASP--------QAWQFSWQLMQLGKSQEVQFFGAITLHSKLMKHWHEVPPENREELKQKILES 90 (971)
T ss_dssp STTTC----CHHHHHTTTST--------HHHHHHHHHTCTTSCHHHHHHHHHHHHHHHHHCGGGCCGGGHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHcCH--------HHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHccHhhCCHHHHHHHHHHHHHH
Confidence 44456888878787764433 22223344444 66788999999999988764333332 2333 33444
Q ss_pred HHHHhccCcHHHHHHHHHHHHHHHHhcCC-ChHhHHHHHHHHhhcC------ChHHHHHHHHHHHHHHHh---cC-----
Q 000156 371 LLEKLKEKKPTVAESLTQTLQAMHKAGCL-NLVDVVEDVKTSVKNK------VPLVRSLTLNWVTFCIET---SS----- 435 (2015)
Q Consensus 371 LL~klkdkk~~V~~aa~~aL~al~~~~~~-~l~~il~~l~~~L~~K------np~vR~~~l~~L~~~l~~---~~----- 435 (2015)
+.... ...+.|+..+..++..++.+ .. ....+++++...+++. ++..+...+.+|..+.+. ..
T Consensus 91 l~~~~-~~~~~vr~kl~~~la~i~~~-~~p~Wp~~l~~l~~~~~~~~~~~~~~~~~~~~~l~iL~~l~EEi~~~~~~~~r 168 (971)
T 2x1g_F 91 IVRFA-GGPKIVLNRLCISLGAYIVH-MLGEWPGAIEEVINTFQNQRMPNVSADVQLWIMLEVLTAIPEEAQVIHTSVKR 168 (971)
T ss_dssp HHHHT-TSCHHHHHHHHHHHHHHHHH-TTCC------HHHHHHHHTC----CHHHHHHHHHHHHHHHHHHHHHCCCSSCH
T ss_pred HHHhC-CCCHHHHHHHHHHHHHHHHH-ccccccHHHHHHHHHHhccccccCCCHHHHHHHHHHHHHhHHHHhccCcHHHH
Confidence 43333 23478999999999999988 33 6778999999888765 677888888888866542 11
Q ss_pred ---hhHHHHhhhhHHHHHHHHhcCCC--------HHHHHHHHHHHHHHHHH--hCchHHHHHHHhccHHHHHHHH-HHHh
Q 000156 436 ---KAAVLKVHKDYVPICMECLNDGT--------PEVRDAAFSVLAAIAKS--VGMRPLERSIEKLDDVRRNKLS-EMIA 501 (2015)
Q Consensus 436 ---~~~l~~~l~~l~p~l~k~L~Ds~--------~~VR~aA~~al~~l~~~--~Ge~~~~~~l~~Ld~~~~kkI~-e~~~ 501 (2015)
+..+...++.+++.+..++.+.. .+++.++.+|+..+... ++.....++++.+- . |. .++.
T Consensus 169 ~~~~~~l~~~~~~vl~ll~~~l~~~~~~~~~~~~~~~~~~al~~l~~~~~~~~ip~~~~~~ll~~l~----~-L~~~~~~ 243 (971)
T 2x1g_F 169 VVLRAEIAKRVQLVIHTVERYLKLQMNRVWDAEAYSNMNRAVKCVGTWIKNIGYTIEGCVTITAVLL----E-VVHKCYW 243 (971)
T ss_dssp HHHHHHHHTTHHHHHHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHSCCCGGGHHHHHHHHH----H-HHHHHHS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcccCCCCCccchhHHHHHHHHHHHHHhhCCcCccccccHHHHHH----h-hhhhhcc
Confidence 12233445677777777775432 27999999999988875 33221112221110 0 00 0000
Q ss_pred cCCCCCCCCCCCccccCCCCCCCCCCCCccccccccccc----ccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcCCCC
Q 000156 502 GSGGDVATGTSSARVQTSGGSVPSVEASESSFVRKSAAS----MLSGKRPVSAAPASKKGGPVKPSAKKDGSGKQETSKL 577 (2015)
Q Consensus 502 ~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~s----~~~~~~P~~~~~~~~k~~~~k~~~~~~~~~~~~~s~~ 577 (2015)
...+.. .+. .... .+..+..+.. .... +.
T Consensus 244 ~~~~~~-~~~-----------~~~~----~~~~~~~a~~~l~~i~~~--~~----------------------------- 276 (971)
T 2x1g_F 244 PCIHAG-DGC-----------MTAD----ENELAESCLKTMVNIIIQ--PD----------------------------- 276 (971)
T ss_dssp SSCC----CC-----------CCHH----HHHHHHHHHHHHHHHHHC--SG-----------------------------
T ss_pred cccccc-ccc-----------cCcC----CcHHHHHHHHHHHHHHcC--cc-----------------------------
Confidence 000000 000 0000 0000000000 0000 00
Q ss_pred CCCCCCCCCCCCCHHHHHHHhhccC--cHHHHhhhccCC----HHHHHHHHHHHHHHHHhc----------------ccc
Q 000156 578 TEAPEDVEPSEMSLEEIESRLGSLI--PADTVGQLKSAV----WKERLEAISSLRQQVEAV----------------QNL 635 (2015)
Q Consensus 578 ~~~~~~~~~~~~s~ee~e~~~~~ll--~~~l~~~L~s~~----Wk~Rl~a~e~L~~~v~~~----------------~~~ 635 (2015)
. . + ...-+...+..++ ...+...+.+.+ |..+ ...+-+..+.+.. +..
T Consensus 277 --~-~---~---~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~-~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l 346 (971)
T 2x1g_F 277 --C-H---N---YPKTAFVLIKMFLDSLSEITKTEWKRENDNEDIIV-HIYMLFVSSVERHSTLLLSGITSADPELSILV 346 (971)
T ss_dssp --G-G---G---CHHHHHHHHHHHHHHHHHHHHHHSSSSCSCSHHHH-HHHHHHHHHHHHTHHHHHHHHHTCCHHHHHHH
T ss_pred --c-c---c---cHHHHHHHHHHHHHhHHHHHHHHhcccccchHHHH-HHHHHHHHHHHHHHHHHHHHhccCcccccHHH
Confidence 0 0 0 0000000000000 011111222223 3222 1122222222110 000
Q ss_pred chHHHHHHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHcC--------C----CchhHHHHHHHHHHhhhc---------
Q 000156 636 DQSVEILVRLVCMLPGWSEKNVQVQQQVIEVINYLAATAT--------K----FPKKCVVLCLLGISERVA--------- 694 (2015)
Q Consensus 636 ~~~~~~Lv~~L~~~pg~~DsN~qV~~~~Le~l~~l~~~~~--------~----~~~~~~~~il~~LveKlg--------- 694 (2015)
....+.++.+. ..||+...+..|...++++|..+++... . .....+..+++.++.++.
T Consensus 347 ~~~l~~ll~~~-~~~~~~~~~~~v~~~~l~fw~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~p~~~~~~~ 425 (971)
T 2x1g_F 347 HRIVQEILHCT-DKPGIYPVEESCSTMALAFWYMLQDEVFAMSNDEQKHKCWEYIKPLYAHLTRILVRKSEQPDEKSLAK 425 (971)
T ss_dssp HHHHHHHHHHH-HCSSCTTTTCTTHHHHHHHHHHHHHHHHC-------CHHHHHHHHHHHHHHHHHHHHTSCCCTTTTSC
T ss_pred HHHHHHHHHHH-cCCCCCCcchhhhHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHHHHHhcCCCcccccc
Confidence 01123333332 2466655556688899999988876321 1 113455667777887762
Q ss_pred -c-------hhhhHHHHHHHHHHHhhhChhHHHHHHHHHhh---h-----CCChhHHHHHHHHHHHHHHHhCCCC-CChh
Q 000156 695 -D-------IKTRAHAMKCLTTFSEAVGPGFIFERLYKIMK---D-----HKNPKVLSEGILWMVSAVEDFGVSH-LKLK 757 (2015)
Q Consensus 695 -D-------~K~r~~a~~~L~~l~e~~~~~~Vl~~L~~~l~---~-----~KnpKv~~~~l~~L~~li~~fG~~~-l~~k 757 (2015)
| ...|..+.++|..++...+ +.+++.+++.+. . ..+|+.+.+++..+..+.+...... -.+.
T Consensus 426 ~d~~e~~~f~~~R~~~~~~l~~~~~~~~-~~~l~~~~~~l~~~l~~~~~~~~~w~~~eaal~~l~~iae~~~~~~~~~l~ 504 (971)
T 2x1g_F 426 WSSDDLECFRCYRQDISDTFMYCYDVLN-DYILEILAAMLDEAIADLQRHPTHWTKLEACIYSFQSVAEHFGGEEKRQIP 504 (971)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHHTTCT-THHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHHTTTC------CHHH
T ss_pred cCHhHHHHHHHHHHHHHHHHHHHHHHHh-HHHHHHHHHHHHHHHHhccCCCCcHHHHHHHHHHHHHHHhhcChhhhHHHH
Confidence 1 0246778889999888776 455555554331 2 2789999999999888765433221 1245
Q ss_pred hHHHHHHhcCC-CCCchhHHHHHHHHHHHHHHHhChhHHhhhhhccHHHHHHHHHHHhcCCCCCCCCCcccccCccccCC
Q 000156 758 DLIDFCKDTGL-QSSAAATRNATIKLLGALHKFVGPDIKGFLADVKPALLSALDAEYEKNPFEGTVVPKKTVRASESTSS 836 (2015)
Q Consensus 758 ~li~~l~~~gL-~~sn~~VR~aA~~ll~~Ly~~~G~~l~~~L~~lkp~ll~~Le~ef~k~~~~~~p~p~R~~r~~~~~~s 836 (2015)
.+++.+..+ . .+.++.||..|..+++.+..+++... .|+..+-|.++..+
T Consensus 505 ~l~~~l~~l-~~~d~~~~vr~~a~~~l~~~~~~l~~~~-~~l~~vl~~l~~~l--------------------------- 555 (971)
T 2x1g_F 505 RLMRVLAEI-PYEKLNVKLLGTALETMGSYCNWLMENP-AYIPPAINLLVRGL--------------------------- 555 (971)
T ss_dssp HHHHHHHHS-CTTTSCHHHHHHHHHHHHHTHHHHC-----CHHHHHHHHHHHH---------------------------
T ss_pred HHHHHHHhc-CccccCHHHHHHHHHHHHHHHHHHhcCH-HHHHHHHHHHHHHh---------------------------
Confidence 566655543 3 24689999999999999998887532 34444334333333
Q ss_pred CCCCCCCCCCCcccccccchHHHHhcCCCChHHHHHHHHHHHHHHHhccccCCCCChhhHHHHHHhcccc--chHHHHHH
Q 000156 837 VSSGGSDGLPREDISGKFTPTLVKSLESPDWKVRLESIEAVNKILEEANKRIQPAGTGELFGGLRGRLYD--SNKNLVMA 914 (2015)
Q Consensus 837 ~~~~~~d~lprvdIs~~L~~~ll~~l~d~~Wk~R~eale~L~~ll~~a~~~I~~~~~~eL~~~L~~rL~D--sN~~V~~~ 914 (2015)
| .+++..|...+..+++++...+.|. +..|+..|...+.. ........
T Consensus 556 ---------------------------~--~~v~~~A~~al~~l~~~~~~~l~p~-~~~ll~~l~~~l~~~~~~~~~~~~ 605 (971)
T 2x1g_F 556 ---------------------------N--SSMSAQATLGLKELCRDCQLQLKPY-ADPLLNACHASLNTGRMKNSDSVR 605 (971)
T ss_dssp ---------------------------H--SSCHHHHHHHHHHHHHHCHHHHHHH-HHHHHHHHHHHHHSTTSCHHHHHH
T ss_pred ---------------------------C--hHHHHHHHHHHHHHHHHHHHhcccc-HHHHHHHHHHHHcCCCCChHHHHH
Confidence 1 2234556667777776655555555 47788888777754 45678888
Q ss_pred HHHHHHHHHHHhC-hhhHHhhhHHHHHHHHHhC----CC--cHHHHHHHHHHHHHHHHhcCchhhHHHHHHHHhcCCCCh
Q 000156 915 TLITLGAVASAMG-PAVEKSSKGVLSDILKCLG----DN--KKHMRECTLTVLDAWLAAVHLDKMVPYVTTALTDAKLGA 987 (2015)
Q Consensus 915 Al~~l~~La~alg-~~f~~~~~~llp~ll~~L~----D~--k~~Vr~aa~~aL~~i~~~~gl~~ll~~l~~~L~~~k~~p 987 (2015)
.+++++.++.+++ ..+.+|+..++++++..+. .. ...-+.....+++.+.. +...+... ..+
T Consensus 606 ~~~ai~~i~~~~~~~~~~~~~~~ll~~l~~~l~~~~~~~~~~~~~~~~~~~~l~~L~~----------~~~~l~~~-~~~ 674 (971)
T 2x1g_F 606 LMFSIGKLMSLLRPEEIPKYLDIIVSPCFEELQAICQADSKTPAARIRTIFRLNMIST----------LFSSLNTD-VDE 674 (971)
T ss_dssp HHHHHHHHHHTSCTTHHHHHHHHHHHHHHHHHHHHHTC---CHHHHHHHHHHHHHHHH----------HHHHHTC-----
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCChhhHHHHHHHHHHHHH----------HHhhcCCC-cCc
Confidence 9999999998876 6677888888888877654 21 22233334444443321 11112110 000
Q ss_pred hHHHHH--HHHHHHHhccCCCCCChhhhHHHHHhhcCCCChHHHHHHHHHHHHHHHHcChhHHHHHh
Q 000156 988 EGRKDL--FDWLSKQLTGLSGFPDAAHLLKPASIAMTDKSSDVRKAAEACIVEILRAGGQETIEKNL 1052 (2015)
Q Consensus 988 ~~R~~~--l~~L~~~l~~~~~~~~~~~ll~pl~~~L~D~~~~VR~aA~~~L~~l~~~~G~~~~~~~l 1052 (2015)
.+.+. -.-+..++ ..+.+++.-++.... .+.+|.+.+..++..+...+|.+ +.+++
T Consensus 675 -~~~~~~~~~~~~~~~------~~i~~~l~~~l~~~~-~~~~v~e~~~~~~~~~~~~~~~~-~~p~l 732 (971)
T 2x1g_F 675 -QATDQPIVQPVLLVM------QRTMPIFKRIAEMWV-EEIDVLEAACSAMKHAITNLRSS-FQPML 732 (971)
T ss_dssp ----------CCHHHH------HTTHHHHHHHHHHTT-TCHHHHHHHHHHHHHHHHHHHC---CTHH
T ss_pred -ccccccCCCchHHHH------HHHHHHHHHHHHhcc-ccHHHHHHHHHHHHHHHHhhhhh-ccccH
Confidence 00000 00000001 123334444444332 46789999999999999988876 45553
No 31
>1w63_A Adapter-related protein complex 1 gamma 1 subunit; endocytosis, clathrin adaptor, transport, coated PITS; 4.0A {Mus musculus} SCOP: i.23.1.1
Probab=99.05 E-value=6.3e-07 Score=119.01 Aligned_cols=462 Identities=11% Similarity=0.034 Sum_probs=261.7
Q ss_pred CChHhHHHHHHHHhhcCChHHHHHHHHHHHHHHHhcChhHHHHhhhhHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhCc
Q 000156 399 LNLVDVVEDVKTSVKNKVPLVRSLTLNWVTFCIETSSKAAVLKVHKDYVPICMECLNDGTPEVRDAAFSVLAAIAKSVGM 478 (2015)
Q Consensus 399 ~~l~~il~~l~~~L~~Knp~vR~~~l~~L~~~l~~~~~~~l~~~l~~l~p~l~k~L~Ds~~~VR~aA~~al~~l~~~~Ge 478 (2015)
......+.+++..+.+++...|+-...++..++... + ..+-.++..+.+-|.|+++.||..|..+|+.+. .
T Consensus 66 ~d~~~~~~~vik~~~s~~~~~Krl~Yl~~~~~~~~~-~----e~~~l~in~l~kDL~~~n~~vr~lAL~~L~~i~----~ 136 (618)
T 1w63_A 66 YPAHFGQLECLKLIASQKFTDKRIGYLGAMLLLDER-Q----DVHLLMTNCIKNDLNHSTQFVQGLALCTLGCMG----S 136 (618)
T ss_dssp CCCGGGHHHHHHHHHSSSHHHHHHHHHHHHHHCCCC-H----HHHHHHHHHHHHHHSCSSSHHHHHHHHHHHHHC----C
T ss_pred CCCcchHHHHHHHHcCCchHHHHHHHHHHHHHhCCC-c----HHHHHHHHHHHHhcCCCCHhHHHHHHHHHHhcC----C
Confidence 345667788888888999999988777766655432 1 123457788999999999999999988887653 2
Q ss_pred hHHHHHHHhccHHHHHHHHHHHhcCCCCCCCCCCCccccCCCCCCCCCCCCcccccccccccccCCCCCCCCCCCCCCCC
Q 000156 479 RPLERSIEKLDDVRRNKLSEMIAGSGGDVATGTSSARVQTSGGSVPSVEASESSFVRKSAASMLSGKRPVSAAPASKKGG 558 (2015)
Q Consensus 479 ~~~~~~l~~Ld~~~~kkI~e~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~s~~~~~~P~~~~~~~~k~~ 558 (2015)
..+ ++.+
T Consensus 137 ~~~---~~~l---------------------------------------------------------------------- 143 (618)
T 1w63_A 137 SEM---CRDL---------------------------------------------------------------------- 143 (618)
T ss_dssp HHH---HHHH----------------------------------------------------------------------
T ss_pred HHH---HHHH----------------------------------------------------------------------
Confidence 211 1100
Q ss_pred CCCCCCCCCCCCCCcCCCCCCCCCCCCCCCCCHHHHHHHhhccCcHHHHhhhccCCHHHHHHHHHHHHHHHHhccccchH
Q 000156 559 PVKPSAKKDGSGKQETSKLTEAPEDVEPSEMSLEEIESRLGSLIPADTVGQLKSAVWKERLEAISSLRQQVEAVQNLDQS 638 (2015)
Q Consensus 559 ~~k~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~ee~e~~~~~ll~~~l~~~L~s~~Wk~Rl~a~e~L~~~v~~~~~~~~~ 638 (2015)
.+.+...|.|.+.-.|..|+..+..++....+..
T Consensus 144 --------------------------------------------~~~l~~~L~~~~~~VRk~A~~al~~l~~~~p~~v-- 177 (618)
T 1w63_A 144 --------------------------------------------AGEVEKLLKTSNSYLRKKAALCAVHVIRKVPELM-- 177 (618)
T ss_dssp --------------------------------------------HHHHHHHHHSCCHHHHHHHHHHHHHHHHHCGGGG--
T ss_pred --------------------------------------------HHHHHHHHcCCCHHHHHHHHHHHHHHHHHChHHH--
Confidence 0233344555666667777777776665432211
Q ss_pred HHHHHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHhhhc-----------------chhhhHH
Q 000156 639 VEILVRLVCMLPGWSEKNVQVQQQVIEVINYLAATATKFPKKCVVLCLLGISERVA-----------------DIKTRAH 701 (2015)
Q Consensus 639 ~~~Lv~~L~~~pg~~DsN~qV~~~~Le~l~~l~~~~~~~~~~~~~~il~~LveKlg-----------------D~K~r~~ 701 (2015)
+.++..+. ..+.|.|..|+..++.++..+....++. ...+..++|.++..+. ++-.+..
T Consensus 178 -~~~~~~l~--~lL~D~d~~V~~~Al~~L~~i~~~~~~~-~~~~~~~v~~l~~~L~~~~~~~~~~~~~~~~~~~~~~q~~ 253 (618)
T 1w63_A 178 -EMFLPATK--NLLNEKNHGVLHTSVVLLTEMCERSPDM-LAHFRKLVPQLVRILKNLIMSGYSPEHDVSGISDPFLQVR 253 (618)
T ss_dssp -GGGGGGTT--TSTTCCCHHHHHHHHHHHHHHCCSHHHH-HHHHHTTHHHHHHHHHHHHHSCCCTTTCSSSSSCHHHHHH
T ss_pred -HHHHHHHH--HHhCCCCHhHHHHHHHHHHHHHHhChHH-HHHHHHHHHHHHHHHHHHHcCCCCccccccCCCCChHHHH
Confidence 11111111 2456777777777777776655321110 0122334444444332 2334445
Q ss_pred HHHHHHHHHhhhChh------HHHHHHHHHhh--hCCChhHHHHHHHHHHHHHHHhCCCCCChhhHHHHHHhcCCCCCch
Q 000156 702 AMKCLTTFSEAVGPG------FIFERLYKIMK--DHKNPKVLSEGILWMVSAVEDFGVSHLKLKDLIDFCKDTGLQSSAA 773 (2015)
Q Consensus 702 a~~~L~~l~e~~~~~------~Vl~~L~~~l~--~~KnpKv~~~~l~~L~~li~~fG~~~l~~k~li~~l~~~gL~~sn~ 773 (2015)
..++|..++... ++ -++..++.... .+.++-|..+++..+..+ +...--....+..+..+ +.+.++
T Consensus 254 il~~L~~l~~~~-~~~~~~~~~~L~~l~~~~~~~~~~~~aV~~ea~~~i~~l----~~~~~l~~~a~~~L~~~-L~~~d~ 327 (618)
T 1w63_A 254 ILRLLRILGRND-DDSSEAMNDILAQVATNTETSKNVGNAILYETVLTIMDI----KSESGLRVLAINILGRF-LLNNDK 327 (618)
T ss_dssp HHHHHHHHTTTC-HHHHHTTHHHHHHHHHTSCCSSTHHHHHHHHHHHHHHHS----CCCHHHHHHHHHHHHHH-HTCSST
T ss_pred HHHHHHHhCCCC-HHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHhc----CCCHHHHHHHHHHHHHH-HhCCCC
Confidence 555555555421 11 13333333211 233456777777766542 22110012245556666 788999
Q ss_pred hHHHHHHHHHHHHHHHhChhHHhhh-------hhccHHHHHHHHHHHhcCCCCCCCCCcccccCccccCCCCCCCCCCCC
Q 000156 774 ATRNATIKLLGALHKFVGPDIKGFL-------ADVKPALLSALDAEYEKNPFEGTVVPKKTVRASESTSSVSSGGSDGLP 846 (2015)
Q Consensus 774 ~VR~aA~~ll~~Ly~~~G~~l~~~L-------~~lkp~ll~~Le~ef~k~~~~~~p~p~R~~r~~~~~~s~~~~~~d~lp 846 (2015)
+||..|...++.+....+..+..++ .+-.+.+...--+-+-++..
T Consensus 328 ~vr~~aL~~L~~i~~~~p~~~~~~~~~i~~~l~d~d~~Ir~~alelL~~l~~---------------------------- 379 (618)
T 1w63_A 328 NIRYVALTSLLKTVQTDHNAVQRHRSTIVDCLKDLDVSIKRRAMELSFALVN---------------------------- 379 (618)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHGGGHHHHHHGGGSSCHHHHHHHHHHHHHHCC----------------------------
T ss_pred chHHHHHHHHHHHHhhCHHHHHHHHHHHHHHccCCChhHHHHHHHHHHHHcc----------------------------
Confidence 9999999999988765443333222 11111111100001111110
Q ss_pred CcccccccchHHHHhcCCCChHHHHHHHHHHHHHHHhccccCCCCChhhHHHHHHhccccchHHHHHHHHHHHHHHHHHh
Q 000156 847 REDISGKFTPTLVKSLESPDWKVRLESIEAVNKILEEANKRIQPAGTGELFGGLRGRLYDSNKNLVMATLITLGAVASAM 926 (2015)
Q Consensus 847 rvdIs~~L~~~ll~~l~d~~Wk~R~eale~L~~ll~~a~~~I~~~~~~eL~~~L~~rL~DsN~~V~~~Al~~l~~La~al 926 (2015)
...+ ..+..+++.-+.+.+-..|.+++..+..++. +..+. +...+..|...|.+.+..+...++..+..+...
T Consensus 380 ~~nv-~~iv~eL~~~l~~~d~e~r~~~v~~I~~la~----k~~~~-~~~~v~~ll~lL~~~~~~v~~~~~~~l~~ii~~- 452 (618)
T 1w63_A 380 GNNI-RGMMKELLYFLDSCEPEFKADCASGIFLAAE----KYAPS-KRWHIDTIMRVLTTAGSYVRDDAVPNLIQLITN- 452 (618)
T ss_dssp SSST-HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH----SSCCC-HHHHHHHHHHHHHHTGGGSCSSHHHHHHHHHHH-
T ss_pred cccH-HHHHHHHHHHHHhCCHHHHHHHHHHHHHHHH----HhCcc-HHHHHHHHHHHHHhccchhHHHHHHHHHHHHhc-
Confidence 0001 1244567777777788889999999988875 22233 466778888888777777777777777777654
Q ss_pred ChhhHHhhhHHHHHHHHHhCC--CcHHHHHHHHHHHHHHHHhcC-------------chhhHHHHHHHHhcCCCChhHHH
Q 000156 927 GPAVEKSSKGVLSDILKCLGD--NKKHMRECTLTVLDAWLAAVH-------------LDKMVPYVTTALTDAKLGAEGRK 991 (2015)
Q Consensus 927 g~~f~~~~~~llp~ll~~L~D--~k~~Vr~aa~~aL~~i~~~~g-------------l~~ll~~l~~~L~~~k~~p~~R~ 991 (2015)
.+++.. ..+..++..+.+ ....+..++.-+|+.+...+. ...+++.+...+.+...++.+|.
T Consensus 453 ~p~l~~---~~v~~L~~~l~~~~~~~~~~~~~~wilGEy~~~i~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~vr~ 529 (618)
T 1w63_A 453 SVEMHA---YTVQRLYKAILGDYSQQPLVQVAAWCIGEYGDLLVSGQCEEEEPIQVTEDEVLDILESVLISNMSTSVTRG 529 (618)
T ss_dssp SCSTHH---HHHHHHHHHHHHCCSCSHHHHHHHHHHHHHHHHHTTCCCSSSCCCCCCHHHHHHHHHHHHHSTTCCHHHHH
T ss_pred ChhHHH---HHHHHHHHHHhcccccHHHHHHHHHHHhhhHHHhcccccccccccCCCHHHHHHHHHHHHhccCCCHHHHH
Confidence 334333 234445555443 223344567888888876542 12345555555542112588999
Q ss_pred HHHHHHHHHhccCCCCCChhhhHHH-HHhhcCCCChHHHHHHHHHHHHH
Q 000156 992 DLFDWLSKQLTGLSGFPDAAHLLKP-ASIAMTDKSSDVRKAAEACIVEI 1039 (2015)
Q Consensus 992 ~~l~~L~~~l~~~~~~~~~~~ll~p-l~~~L~D~~~~VR~aA~~~L~~l 1039 (2015)
.++..+.+.+...+ +..+.+.. +-.+..|.+.|||..|..++.-+
T Consensus 530 ~~lta~~Kl~~~~~---~~~~~l~~~L~~~~~~~d~evrdRA~~y~~ll 575 (618)
T 1w63_A 530 YALTAIMKLSTRFT---CTVNRIKKVVSIYGSSIDVELQQRAVEYNALF 575 (618)
T ss_dssp HHHHHHHHHHTTCS---SCHHHHHHHHHHHTTCSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCc---chHHHHHHHHHHhcCCCCHHHHHHHHHHHHHH
Confidence 99999988776553 22444444 44567899999999999766554
No 32
>1wa5_B Importin alpha subunit; nuclear transport/complex, nuclear transport, exportin, RAN GTPase, protein transport; HET: GTP; 2.0A {Saccharomyces cerevisiae} SCOP: a.118.1.1 PDB: 1un0_A 2c1t_A 1bk5_A 1ee5_A 1bk6_A 1ee4_A
Probab=99.04 E-value=3.3e-09 Score=138.39 Aligned_cols=378 Identities=13% Similarity=0.081 Sum_probs=252.9
Q ss_pred cHHHHhhhccCCHHHHHHHHHHHHHHHHhcccc--c-----hHHHHHHHHHhcCCCCccc-HHHHHHHHHHHHHHHHHHc
Q 000156 603 PADTVGQLKSAVWKERLEAISSLRQQVEAVQNL--D-----QSVEILVRLVCMLPGWSEK-NVQVQQQVIEVINYLAATA 674 (2015)
Q Consensus 603 ~~~l~~~L~s~~Wk~Rl~a~e~L~~~v~~~~~~--~-----~~~~~Lv~~L~~~pg~~Ds-N~qV~~~~Le~l~~l~~~~ 674 (2015)
-+.+++.|.+.++..|..|+..|.+++...... . .....|+.+ +.+. +..|+..++.+|..++...
T Consensus 89 i~~lv~~L~s~~~~~~~~A~~~L~~ll~~~~~~~~~~~~~~g~i~~Lv~~------L~~~~~~~v~~~A~~~L~~l~~~~ 162 (530)
T 1wa5_B 89 LPQMTQQLNSDDMQEQLSATVKFRQILSREHRPPIDVVIQAGVVPRLVEF------MRENQPEMLQLEAAWALTNIASGT 162 (530)
T ss_dssp HHHHHHHHSCSSHHHHHHHHHHHHHHTCCSSSCSHHHHHHTTCHHHHHHT------TSTTSCHHHHHHHHHHHHHHTTSC
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHhCCCCCccHHHHHHCCCHHHHHHH------hCCCCCHHHHHHHHHHHHHHhCCC
Confidence 467889999999999999999999887542111 1 012233332 3444 7888888998888776521
Q ss_pred CCCchhHH-HHHHHHHHhhhc--chhhhHHHHHHHHHHHhhhC--hh-----HHHHHHHHHhhhCCChhHHHHHHHHHHH
Q 000156 675 TKFPKKCV-VLCLLGISERVA--DIKTRAHAMKCLTTFSEAVG--PG-----FIFERLYKIMKDHKNPKVLSEGILWMVS 744 (2015)
Q Consensus 675 ~~~~~~~~-~~il~~LveKlg--D~K~r~~a~~~L~~l~e~~~--~~-----~Vl~~L~~~l~~~KnpKv~~~~l~~L~~ 744 (2015)
+......+ ..+++.|+.-+. +..+|..|..+|..++.... .. -+++.|+..+ .+.++.++..++..|..
T Consensus 163 ~~~~~~~~~~g~i~~Lv~lL~~~~~~vr~~A~~aL~~l~~~~~~~~~~~~~~~~l~~L~~ll-~~~~~~v~~~a~~~L~~ 241 (530)
T 1wa5_B 163 SAQTKVVVDADAVPLFIQLLYTGSVEVKEQAIWALGNVAGDSTDYRDYVLQCNAMEPILGLF-NSNKPSLIRTATWTLSN 241 (530)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHCCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTCHHHHHHGG-GSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCHHHHHHHHcCCCHHHHHHHHHHHHHHhCCCccchHHHHHcCcHHHHHHHh-ccCCHHHHHHHHHHHHH
Confidence 11111111 235677777665 45789999999999886421 11 1355566665 56889999999999998
Q ss_pred HHHHhCCCC--CChhhHHHHHHhcCCCCCchhHHHHHHHHHHHHHHHhChhHHhhhhhccHHHHHHHHHHHhcCCCCCCC
Q 000156 745 AVEDFGVSH--LKLKDLIDFCKDTGLQSSAAATRNATIKLLGALHKFVGPDIKGFLADVKPALLSALDAEYEKNPFEGTV 822 (2015)
Q Consensus 745 li~~fG~~~--l~~k~li~~l~~~gL~~sn~~VR~aA~~ll~~Ly~~~G~~l~~~L~~lkp~ll~~Le~ef~k~~~~~~p 822 (2015)
+....+... .-...+++.+..+ +.+.++.||..|..+|+.|...... ....+ ++
T Consensus 242 L~~~~~~~~~~~~~~~~l~~L~~l-L~~~d~~v~~~a~~~L~~L~~~~~~------------~~~~~---~~-------- 297 (530)
T 1wa5_B 242 LCRGKKPQPDWSVVSQALPTLAKL-IYSMDTETLVDACWAISYLSDGPQE------------AIQAV---ID-------- 297 (530)
T ss_dssp HHCCSSSCCCHHHHGGGHHHHHHH-TTCCCHHHHHHHHHHHHHHHSSCHH------------HHHHH---HH--------
T ss_pred HhCCCCCCCcHHHHHhHHHHHHHH-HcCCCHHHHHHHHHHHHHHhCCCHH------------HHHHH---Hh--------
Confidence 885431211 1234677888888 9999999999999999877532111 11111 00
Q ss_pred CCcccccCccccCCCCCCCCCCCCCcccccccchHHHHhcCCCChHHHHHHHHHHHHHHHhccccCCCCChhhHHHHHHh
Q 000156 823 VPKKTVRASESTSSVSSGGSDGLPREDISGKFTPTLVKSLESPDWKVRLESIEAVNKILEEANKRIQPAGTGELFGGLRG 902 (2015)
Q Consensus 823 ~p~R~~r~~~~~~s~~~~~~d~lprvdIs~~L~~~ll~~l~d~~Wk~R~eale~L~~ll~~a~~~I~~~~~~eL~~~L~~ 902 (2015)
..+.+.++..+.+.+|.+|..|+..|..++.........-.-..+++.|..
T Consensus 298 -----------------------------~~~v~~Lv~lL~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~l~~L~~ 348 (530)
T 1wa5_B 298 -----------------------------VRIPKRLVELLSHESTLVQTPALRAVGNIVTGNDLQTQVVINAGVLPALRL 348 (530)
T ss_dssp -----------------------------TTCHHHHHHGGGCSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHH
T ss_pred -----------------------------cCcHHHHHHHHCCCChhhHHHHHHHHHHHHcCCHHHHHHHHHcchHHHHHH
Confidence 003456778888899999999999999887421100000001357888899
Q ss_pred ccccchHHHHHHHHHHHHHHHHHhChhhHHhh-hHHHHHHHHHhCCCcHHHHHHHHHHHHHHHHhcCc----------hh
Q 000156 903 RLYDSNKNLVMATLITLGAVASAMGPAVEKSS-KGVLSDILKCLGDNKKHMRECTLTVLDAWLAAVHL----------DK 971 (2015)
Q Consensus 903 rL~DsN~~V~~~Al~~l~~La~alg~~f~~~~-~~llp~ll~~L~D~k~~Vr~aa~~aL~~i~~~~gl----------~~ 971 (2015)
.|.+.+..++..|+.+|+.|+.........++ ..++|.++..|.+....+|..|..+|..++...+. ..
T Consensus 349 lL~~~~~~vr~~A~~aL~~l~~~~~~~~~~~~~~~~l~~L~~lL~~~~~~v~~~a~~aL~~l~~~~~~~~~~~~~l~~~~ 428 (530)
T 1wa5_B 349 LLSSPKENIKKEACWTISNITAGNTEQIQAVIDANLIPPLVKLLEVAEYKTKKEACWAISNASSGGLQRPDIIRYLVSQG 428 (530)
T ss_dssp HTTCSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTCHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTTTCTHHHHHHHHTT
T ss_pred HHcCCCHHHHHHHHHHHHHHHcCCHHHHHHHHHCCCHHHHHHHHhcCCHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHCC
Confidence 99999999999999999998863222233332 35789999999999999999999999999876432 23
Q ss_pred hHHHHHHHHhcCCCChhHHHHHHHHHHHHhccCCC--------CCChh------hhHHHHHhhcCCCChHHHHHHHHHHH
Q 000156 972 MVPYVTTALTDAKLGAEGRKDLFDWLSKQLTGLSG--------FPDAA------HLLKPASIAMTDKSSDVRKAAEACIV 1037 (2015)
Q Consensus 972 ll~~l~~~L~~~k~~p~~R~~~l~~L~~~l~~~~~--------~~~~~------~ll~pl~~~L~D~~~~VR~aA~~~L~ 1037 (2015)
+++.+...|.++ ++.+|..++..|...+..... ..... ..+..|...+.|.+.+|++.|..++.
T Consensus 429 ~l~~L~~ll~~~--~~~v~~~al~aL~~l~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~L~~L~~~~~~~v~~~a~~il~ 506 (530)
T 1wa5_B 429 CIKPLCDLLEIA--DNRIIEVTLDALENILKMGEADKEARGLNINENADFIEKAGGMEKIFNCQQNENDKIYEKAYKIIE 506 (530)
T ss_dssp CHHHHHHHTTTC--CHHHHHHHHHHHHHHHHHHHHHHHHHTCSSCHHHHHHHHTTHHHHHHGGGGCSCHHHHHHHHHHHH
T ss_pred CHHHHHHHHhCC--CHHHHHHHHHHHHHHHHhhhhhhhcccccccHHHHHHHHcCcHHHHHHHHcCCCHHHHHHHHHHHH
Confidence 677888888765 588888888777665543211 11111 12344666789999999999988887
Q ss_pred HHHHH
Q 000156 1038 EILRA 1042 (2015)
Q Consensus 1038 ~l~~~ 1042 (2015)
.+...
T Consensus 507 ~~~~~ 511 (530)
T 1wa5_B 507 TYFGE 511 (530)
T ss_dssp HHSSS
T ss_pred HHCCc
Confidence 66544
No 33
>4b8j_A Importin subunit alpha-1A; transport protein, nuclear localization signal; 2.00A {Oryza sativa japonica group} PDB: 4b8o_A 2yns_A 4b8p_A
Probab=98.99 E-value=5.8e-08 Score=126.51 Aligned_cols=385 Identities=11% Similarity=0.052 Sum_probs=260.8
Q ss_pred hhhhhcCCChHHHHHHHHHHHHHhhccCCCCchHHH--hhhhhhHhhhcCCc-HHHHHHHHHHHHHHHHHhchhhhhhH-
Q 000156 16 WEDRLLHKNWKVRNEANIDLAALCDSITDPKDNRIR--ELGPLFKKTVADSN-APVQDKALDALIAYLKAADADAGRYA- 91 (2015)
Q Consensus 16 l~erl~~k~WK~R~~ayeeL~~~~~~~~d~~~~~~~--~~~~~~~k~v~DsN-~~vqe~~leal~~~l~~~~~~~~~~~- 91 (2015)
|.+.|.+.+|..|..|...|.+.+....++.-..+. ...+.+.+++.+.+ +.+|..++.+|..+............
T Consensus 79 lv~~L~s~~~~~~~~A~~~L~~l~s~~~~~~~~~~~~~g~v~~Lv~lL~~~~~~~v~~~A~~~L~~l~~~~~~~~~~~~~ 158 (528)
T 4b8j_A 79 MIGGVYSDDNNLQLEATTQFRKLLSIERSPPIEEVIQSGVVPRFVQFLTREDFPQLQFEAAWALTNIASGTSENTKVVID 158 (528)
T ss_dssp HHHHHTSSCHHHHHHHHHHHHHHHTCSSSCCHHHHHHTTCHHHHHHHHTCTTCHHHHHHHHHHHHHHHTSCHHHHHHHHH
T ss_pred HHHHHcCCCHHHHHHHHHHHHHHhcCCCCchHHHHHHCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHhCCCHHHHHHHHh
Confidence 567888999999999999999987653222211121 23455566777776 99999999999888754222111111
Q ss_pred HHHHHHHHHhhcCCChhHHHHHHHHHHHHHhhhh--h-----hhHHHHHHHHh-hcCChhhHHHHHHHHHHHHHHhCCC-
Q 000156 92 KEVCDAIAAKCLTGRPKTVEKAQAVFMLWVELEA--V-----DVFLDVMEKAI-KNKVAKAVVPAIDVMFQALSEFGAK- 162 (2015)
Q Consensus 92 ~~v~~~LieK~l~~k~~~k~~a~~~ll~~~E~~~--~-----~~v~~~L~~~~-~~KnpKv~~~~l~~L~~~l~~fG~~- 162 (2015)
...++.|+.-+-...+.+++.|..++..++.... . ..++..|+..+ .+.++.++..++.+|..+.......
T Consensus 159 ~g~i~~L~~lL~~~~~~v~~~a~~aL~~l~~~~~~~~~~i~~~g~l~~Ll~lL~~~~~~~v~~~a~~~L~~L~~~~~~~~ 238 (528)
T 4b8j_A 159 HGAVPIFVKLLGSSSDDVREQAVWALGNVAGDSPKCRDLVLANGALLPLLAQLNEHTKLSMLRNATWTLSNFCRGKPQPS 238 (528)
T ss_dssp TTHHHHHHHHTTCSCHHHHHHHHHHHHHHHHTCHHHHHHHHHTTCHHHHHHTCCTTCCHHHHHHHHHHHHHHHCSSSCCC
T ss_pred CCcHHHHHHHhcCCCHHHHHHHHHHHHHHhCCChhhHHHHHHCCcHHHHHHHHhcCCCHHHHHHHHHHHHHHHcCCCCCc
Confidence 2467778776333688999999998888875311 1 13466777777 6788999999999998876643221
Q ss_pred CcChhHHHhhhhhhhcCCChhHHHHHHHHHHHHHHHhCCchhhHHHhhhChHHHHHHHHHHHHhcCCCCCCCccchhhhh
Q 000156 163 IIPPKRILKMLPELFDHQDQNVRASSKGLTLELCRWIGKDPVKTILFEKMRDTMKKELEVELVNVSGTARPTRKIRAEQD 242 (2015)
Q Consensus 163 ~i~~k~il~~l~~ll~~~d~~VR~~a~~l~~ely~~lG~~~l~~~l~~~Lk~~q~keLe~~f~k~~~~~~P~R~~rs~~~ 242 (2015)
..-...+++.|..++.+.|..||..|..++..+.. +.+ .. .+.+ +
T Consensus 239 ~~~~~~~l~~L~~lL~~~~~~v~~~a~~aL~~l~~--~~~---~~---------~~~~---~------------------ 283 (528)
T 4b8j_A 239 FEQTRPALPALARLIHSNDEEVLTDACWALSYLSD--GTN---DK---------IQAV---I------------------ 283 (528)
T ss_dssp HHHHTTHHHHHHHHTTCCCHHHHHHHHHHHHHHTS--SCH---HH---------HHHH---H------------------
T ss_pred HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHc--CCH---HH---------HHHH---H------------------
Confidence 11235689999999999999999998777655442 111 00 0000 0
Q ss_pred HhhhhhccccCCCCCCCCCCCCCCCCCCCCCCCCCcccccccCcchhhhhhhccCChHHHHHHHHHHHHHhcCCCCCCCC
Q 000156 243 KELGQELISEDVGPGPSEESTADVPPEIDEYELVDPVDILTPLEKSGFWEGVKATKWSERKDAVAELTKLASTKRIAPGD 322 (2015)
Q Consensus 243 ~~~~~ea~~~~~~~~~~~~~~~~~~~~iD~~dl~~~vdIl~kl~~~~f~~~l~s~kWkeR~eaL~~L~~l~~~~ki~~~~ 322 (2015)
. .| + + +.+...+.+.+|..|..|+..|..++.+.......
T Consensus 284 ---------~-~g-------------------------~---v--~~Lv~lL~~~~~~v~~~a~~~L~nl~~~~~~~~~~ 323 (528)
T 4b8j_A 284 ---------E-AG-------------------------V---C--PRLVELLLHPSPSVLIPALRTVGNIVTGDDAQTQC 323 (528)
T ss_dssp ---------H-TT-------------------------C---H--HHHHHHTTCSCHHHHHHHHHHHHHHTTSCHHHHHH
T ss_pred ---------H-cC-------------------------H---H--HHHHHHHcCCChhHHHHHHHHHHHHHcCCHHHHHH
Confidence 0 00 0 1 24556677778899999999999887532100000
Q ss_pred --hHHHHHHHHHHhccc-CHHHHHHHHHHHHHHHHHhhhcchhh-hHhHHHHHHHHhccCcHHHHHHHHHHHHHHHHhcC
Q 000156 323 --FTEVCRTLKKLITDV-NIAVAVEAIQAIGNLARGLRTHFSGS-SRFLLPVLLEKLKEKKPTVAESLTQTLQAMHKAGC 398 (2015)
Q Consensus 323 --y~~l~~~L~k~l~D~-N~~V~~~A~~~l~~La~~L~~~f~~~-~~~llp~LL~klkdkk~~V~~aa~~aL~al~~~~~ 398 (2015)
-..+++.|...+.+. +..|...|+.+|+.|+.+-....... -..++|.|+..+.+....++..+..+|..+...+.
T Consensus 324 ~~~~~~l~~L~~lL~~~~~~~v~~~A~~~L~nl~~~~~~~~~~~~~~~~i~~L~~lL~~~~~~v~~~a~~aL~nl~~~~~ 403 (528)
T 4b8j_A 324 IIDHQALPCLLSLLTQNLKKSIKKEACWTISNITAGNKDQIQAVINAGIIGPLVNLLQTAEFDIKKEAAWAISNATSGGS 403 (528)
T ss_dssp HHTTTHHHHHHHHHHSCCCHHHHHHHHHHHHHHHTSCHHHHHHHHHTTCHHHHHHHHHHSCHHHHHHHHHHHHHHHHHSC
T ss_pred HHHhhhHHHHHHHHcCCCcHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHhcCCHHHHHHHHHHHHHHHcCCC
Confidence 023577788888877 99999999999999987433222222 23678999999999999999999999999887511
Q ss_pred CC----h--HhHHHHHHHHhhcCChHHHHHHHHHHHHHHHhcChh---------HHHHhhh--hHHHHHHHHhcCCCHHH
Q 000156 399 LN----L--VDVVEDVKTSVKNKVPLVRSLTLNWVTFCIETSSKA---------AVLKVHK--DYVPICMECLNDGTPEV 461 (2015)
Q Consensus 399 ~~----l--~~il~~l~~~L~~Knp~vR~~~l~~L~~~l~~~~~~---------~l~~~l~--~l~p~l~k~L~Ds~~~V 461 (2015)
.. + ..+++.++..+.+.++.++..++..|..++...... .+...+. ..+..+..++.+.+++|
T Consensus 404 ~~~~~~l~~~~~i~~L~~lL~~~d~~v~~~al~~L~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~l~~L~~~~~~~v 483 (528)
T 4b8j_A 404 HDQIKYLVSEGCIKPLCDLLICPDIRIVTVCLEGLENILKVGETDKTLAAGDVNVFSQMIDEAEGLEKIENLQSHDNNEI 483 (528)
T ss_dssp HHHHHHHHHTTCHHHHHHGGGCSCHHHHHHHHHHHHHHHHHHHHHHHHHTCSCCHHHHHHHHTTHHHHHHHGGGCSSHHH
T ss_pred HHHHHHHHHCCCHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhhhcccccccHHHHHHHHCCcHHHHHHHHcCCCHHH
Confidence 00 1 245778888999999999999999999988644220 1111111 23567888899999999
Q ss_pred HHHHHHHHHHHHHH
Q 000156 462 RDAAFSVLAAIAKS 475 (2015)
Q Consensus 462 R~aA~~al~~l~~~ 475 (2015)
++.|...+..++..
T Consensus 484 ~~~a~~il~~~~~~ 497 (528)
T 4b8j_A 484 YEKAVKILEAYWMD 497 (528)
T ss_dssp HHHHHHHHHHHCC-
T ss_pred HHHHHHHHHHHCCC
Confidence 99999998866544
No 34
>2z6g_A B-catenin; FULL-length, beta-catenin, cell adhesion; 3.40A {Danio rerio}
Probab=98.98 E-value=1.1e-06 Score=119.59 Aligned_cols=502 Identities=12% Similarity=0.060 Sum_probs=289.1
Q ss_pred ChHHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHhhhcchhhhHhHHHHHHHHhccCcHHHHHHHHHHHHHHHHhc----
Q 000156 322 DFTEVCRTLKKLITDVNIAVAVEAIQAIGNLARGLRTHFSGSSRFLLPVLLEKLKEKKPTVAESLTQTLQAMHKAG---- 397 (2015)
Q Consensus 322 ~y~~l~~~L~k~l~D~N~~V~~~A~~~l~~La~~L~~~f~~~~~~llp~LL~klkdkk~~V~~aa~~aL~al~~~~---- 397 (2015)
.|..-+..+...|.+.+..+...+++.+..+... -.....+|.|+..+.+..+.|++.+..+|..+..+.
T Consensus 112 ~~~~~i~~lv~~L~~~~~~~r~~a~~~l~~~~~~------~i~~g~ip~Lv~lL~~~d~~vr~~A~~~L~~L~~~~~~~~ 185 (780)
T 2z6g_A 112 QFDSAHPTNVQRLAEPSQMLKHAVVNLINYQDDA------ELATRAIPELTKLLNDEDQVVVNKAAVMVHQLSKKEASRH 185 (780)
T ss_dssp --------------CCSCHHHHHHHHHHHHHHHH------HHHHHHHHHHHHHHHCSCHHHHHHHHHHHHHHHTSHHHHH
T ss_pred cccccHHHHHHHhcCccHHHHHHHHHHHHhhhHH------HHHhCCHHHHHHHHCCCCHHHHHHHHHHHHHHhCCChhHH
Confidence 3444456666677777777777777777654321 234678999999999999999999999999887530
Q ss_pred -CCChHhHHHHHHHHhhc-CChHHHHHHHHHHHHHHHhcChh--HHHHhhhhHHHHHHHHhcCCCHHHHHHHHHHHHHHH
Q 000156 398 -CLNLVDVVEDVKTSVKN-KVPLVRSLTLNWVTFCIETSSKA--AVLKVHKDYVPICMECLNDGTPEVRDAAFSVLAAIA 473 (2015)
Q Consensus 398 -~~~l~~il~~l~~~L~~-Knp~vR~~~l~~L~~~l~~~~~~--~l~~~l~~l~p~l~k~L~Ds~~~VR~aA~~al~~l~ 473 (2015)
......+++.|+..|.+ .++.+|..++..|..+.. .... .+.. ...+|.|+.+|.+.++.||..|..+|..+.
T Consensus 186 ~i~~~~~~i~~Lv~~L~~~~d~~vr~~Aa~aL~~Ls~-~~~~~~~i~~--~g~I~~Lv~lL~~~~~~v~~~A~~aL~nLa 262 (780)
T 2z6g_A 186 AIMRSPQMVSAIVRTMQNTNDVETARCTSGTLHNLSH-HREGLLAIFK--SGGIPALVNMLGSPVDSVLFHAITTLHNLL 262 (780)
T ss_dssp HHTTCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHT-SHHHHHHHHH--TTHHHHHHHHTTCSCHHHHHHHHHHHHHHH
T ss_pred HHHhccChHHHHHHHHcCCCCHHHHHHHHHHHHHHhC-CchhHHHHHH--cCCHHHHHHHHcCCCHHHHHHHHHHHHHHh
Confidence 01124678888888875 489999999999988433 2211 1211 358899999999999999999999999888
Q ss_pred HHhCchHHHHHHHhccHHHHHHHHHHHhcCCCCCCCCCCCccccCCCCCCCCCCCCcccccccccccccCCCCCCCCCCC
Q 000156 474 KSVGMRPLERSIEKLDDVRRNKLSEMIAGSGGDVATGTSSARVQTSGGSVPSVEASESSFVRKSAASMLSGKRPVSAAPA 553 (2015)
Q Consensus 474 ~~~Ge~~~~~~l~~Ld~~~~kkI~e~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~s~~~~~~P~~~~~~ 553 (2015)
....+. +..+.+ ..
T Consensus 263 ~~~~~~-------------~~~v~~---~g-------------------------------------------------- 276 (780)
T 2z6g_A 263 LHQEGA-------------KMAVRL---AG-------------------------------------------------- 276 (780)
T ss_dssp HHSTTH-------------HHHHHH---TT--------------------------------------------------
T ss_pred CCChhh-------------HHHHHH---cC--------------------------------------------------
Confidence 764431 111110 00
Q ss_pred CCCCCCCCCCCCCCCCCCCcCCCCCCCCCCCCCCCCCHHHHHHHhhccCcHHHHhhhccCCHHHHHHHHHHHHHHHHhcc
Q 000156 554 SKKGGPVKPSAKKDGSGKQETSKLTEAPEDVEPSEMSLEEIESRLGSLIPADTVGQLKSAVWKERLEAISSLRQQVEAVQ 633 (2015)
Q Consensus 554 ~~k~~~~k~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~ee~e~~~~~ll~~~l~~~L~s~~Wk~Rl~a~e~L~~~v~~~~ 633 (2015)
.-+.++..|.+.+|+.|..++..|..+.....
T Consensus 277 ------------------------------------------------~v~~Lv~lL~~~~~~v~~~a~~aL~~La~~~~ 308 (780)
T 2z6g_A 277 ------------------------------------------------GLQKMVALLNKTNVKFLAITTDCLQILAYGNQ 308 (780)
T ss_dssp ------------------------------------------------HHHHHHHGGGCCCHHHHHHHHHHHHHHHTTCH
T ss_pred ------------------------------------------------CHHHHHHHHhcCCHHHHHHHHHHHHHHhcCCh
Confidence 00234455566667766666666554332110
Q ss_pred c------cchHHHHHHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHhhhcchhhhHHHHHHHH
Q 000156 634 N------LDQSVEILVRLVCMLPGWSEKNVQVQQQVIEVINYLAATATKFPKKCVVLCLLGISERVADIKTRAHAMKCLT 707 (2015)
Q Consensus 634 ~------~~~~~~~Lv~~L~~~pg~~DsN~qV~~~~Le~l~~l~~~~~~~~~~~~~~il~~LveKlgD~K~r~~a~~~L~ 707 (2015)
+ .....+.|++++.. .....+...+..++..+.. + ...+..
T Consensus 309 e~~~~i~~~~~i~~Lv~lL~~-----~~~~~~~~~a~~aL~~Ls~-~---------------------~~~~~~------ 355 (780)
T 2z6g_A 309 ESKLIILASGGPQALVNIMRT-----YTYEKLLWTTSRVLKVLSV-C---------------------SSNKPA------ 355 (780)
T ss_dssp HHHHHHHTTTHHHHHHHHHTT-----CCCHHHHHHHHHHHHHHHT-S---------------------TTHHHH------
T ss_pred HHHHHHHHcCCHHHHHHHHhc-----CCHHHHHHHHHHHHHHhhc-C---------------------hHHHHH------
Confidence 0 00112334444321 0111122222333332221 1 011100
Q ss_pred HHHhhhChhHHHHHHHHHhhhCCChhHHHHHHHHHHHHHHHhCCCCCChhhHHHHHHhcCCCCCchhHHHHHHHHHHHHH
Q 000156 708 TFSEAVGPGFIFERLYKIMKDHKNPKVLSEGILWMVSAVEDFGVSHLKLKDLIDFCKDTGLQSSAAATRNATIKLLGALH 787 (2015)
Q Consensus 708 ~l~e~~~~~~Vl~~L~~~l~~~KnpKv~~~~l~~L~~li~~fG~~~l~~k~li~~l~~~gL~~sn~~VR~aA~~ll~~Ly 787 (2015)
+.+ .-+++.|+..+ .+.++.++..++..|.++...... ......+++.+..+ +.+.++.||..|..+|+.|.
T Consensus 356 -i~~----~g~l~~Ll~lL-~~~~~~~~~~a~~~L~~L~~~~~~-~~~~~~~i~~Lv~l-L~~~d~~vr~~A~~aL~~L~ 427 (780)
T 2z6g_A 356 -IVE----AGGMQALGLHL-TDPSQRLVQNCLWTLRNLSDAATK-QEGMEGLLGTLVQL-LGSDDINVVTCAAGILSNLT 427 (780)
T ss_dssp -HHH----TTHHHHHGGGT-TCSCHHHHHHHHHHHHHHHTTCTT-CSCCHHHHHHHHHH-TTCSCHHHHHHHHHHHHHHT
T ss_pred -HHH----hchHHHHHHHH-cCCchHHHHHHHHHHHHHhccchh-hhhhhhHHHHHHHH-HcCCCHHHHHHHHHHHHHHH
Confidence 000 01334444443 455777888888888777754322 22346788888888 99999999999999998774
Q ss_pred HHhChhHHhhhhhccHHHHHHHHHHHhcCCCCCCCCCcccccCccccCCCCCCCCCCCCCcccccccchHHHHhcCC-CC
Q 000156 788 KFVGPDIKGFLADVKPALLSALDAEYEKNPFEGTVVPKKTVRASESTSSVSSGGSDGLPREDISGKFTPTLVKSLES-PD 866 (2015)
Q Consensus 788 ~~~G~~l~~~L~~lkp~ll~~Le~ef~k~~~~~~p~p~R~~r~~~~~~s~~~~~~d~lprvdIs~~L~~~ll~~l~d-~~ 866 (2015)
... +.....+ -+. ...+.|+..+.+ .+
T Consensus 428 ~~~-~~~~~~i---------------~~~------------------------------------g~i~~Lv~lL~~~~~ 455 (780)
T 2z6g_A 428 CNN-YKNKMMV---------------CQV------------------------------------GGIEALVRTVLRAGD 455 (780)
T ss_dssp SSC-HHHHHHH---------------HTT------------------------------------THHHHHHHHHHHHTT
T ss_pred hCC-HHHHHHH---------------HHC------------------------------------CCHHHHHHHHHccCC
Confidence 321 1111110 000 011234444433 23
Q ss_pred h-HHHHHHHHHHHHHHHhcccc---CCCCC-hhhHHHHHHhccccch-HHHHHHHHHHHHHHHHHhChhhHHhh--hHHH
Q 000156 867 W-KVRLESIEAVNKILEEANKR---IQPAG-TGELFGGLRGRLYDSN-KNLVMATLITLGAVASAMGPAVEKSS--KGVL 938 (2015)
Q Consensus 867 W-k~R~eale~L~~ll~~a~~~---I~~~~-~~eL~~~L~~rL~DsN-~~V~~~Al~~l~~La~alg~~f~~~~--~~ll 938 (2015)
| .+|..|+..|..|.... .. .+... -...++.|...|.+.+ ..|+..|+.+|+.|+. +......+ ..++
T Consensus 456 ~~~v~~~Al~aL~nL~~~~-~~~~~~~~~v~~~~~l~~L~~lL~~~~~~~v~~~A~~aL~nLa~--~~~~~~~i~~~g~i 532 (780)
T 2z6g_A 456 REDITEPAICALRHLTSRH-QDAEMAQNAVRLHYGLPVVVKLLHPPSHWPLIKATVGLIRNLAL--CPANHAPLREQGAI 532 (780)
T ss_dssp CHHHHHHHHHHHHHTTSSS-TTHHHHHHHHHHTTCHHHHHHTTSTTCCHHHHHHHHHHHHHHHS--SHHHHHHHHHTTHH
T ss_pred HHHHHHHHHHHHHHHHhcC-chHHHHHHHHHHcCCHHHHHHHhcCCChHHHHHHHHHHHHHHhc--CHHHHHHHHHCCCH
Confidence 4 78888888888764210 00 00000 0234677888887666 4899999999999984 33322211 2467
Q ss_pred HHHHHHhCCCc----------------------HHHHHHHHHHHHHHHHh------cCchhhHHHHHHHHhcCCCChhHH
Q 000156 939 SDILKCLGDNK----------------------KHMRECTLTVLDAWLAA------VHLDKMVPYVTTALTDAKLGAEGR 990 (2015)
Q Consensus 939 p~ll~~L~D~k----------------------~~Vr~aa~~aL~~i~~~------~gl~~ll~~l~~~L~~~k~~p~~R 990 (2015)
|.|+..|.+.. ..++.++..||..++.. +.-..+++.+...|.+. ++.+|
T Consensus 533 ~~Lv~lL~~~~~~~~~~aa~al~nq~~~~~~~~~~v~~~a~~aL~~La~~~~~~~~l~~~~~i~~Lv~lL~~~--~~~v~ 610 (780)
T 2z6g_A 533 PRLVQLLVRAHQDTQRRTSMGGTQQQFVEGVRMEEIVEACTGALHILARDIHNRIVIRGLNTIPLFVQLLYSP--IENIQ 610 (780)
T ss_dssp HHHHHHHHHHHHHHHHTTC------CCSTTCCHHHHHHHHHHHHHHHTTSHHHHHHHHHTCCHHHHHHGGGCS--CHHHH
T ss_pred HHHHHHHHhcchhHHHHHhhccccchhhcccChHHHHHHHHHHHHHHhcChhhHHHHHHCCcHHHHHHHHcCC--CHHHH
Confidence 88887776532 34667777777775421 11134577888888876 57888
Q ss_pred HHHHHHHHHHhccCCCC-CCh--hhhHHHHHhhcCCCChHHHHHHHHHHHHHHHHcCh
Q 000156 991 KDLFDWLSKQLTGLSGF-PDA--AHLLKPASIAMTDKSSDVRKAAEACIVEILRAGGQ 1045 (2015)
Q Consensus 991 ~~~l~~L~~~l~~~~~~-~~~--~~ll~pl~~~L~D~~~~VR~aA~~~L~~l~~~~G~ 1045 (2015)
..++..|...... ... ..+ ...+.+|..++.|.+.+||..|..+|..+...-+.
T Consensus 611 ~~a~~aL~~L~~~-~~~~~~i~~~g~i~~L~~Ll~~~~~~Vr~~A~~aL~~l~~~~~~ 667 (780)
T 2z6g_A 611 RVAAGVLCELAQD-KEAAEAIEAEGATAPLTELLHSRNEGVATYAAAVLFRMSEDKPQ 667 (780)
T ss_dssp HHHHHHHHHHHTS-HHHHHHHHHTTCHHHHHHGGGCSCHHHHHHHHHHHHHHHTTSCT
T ss_pred HHHHHHHHHHhcC-HHHHHHHHHCCCHHHHHHHHcCCCHHHHHHHHHHHHHHHcCChH
Confidence 8888777654321 100 011 12456688899999999999999999988776553
No 35
>4b8j_A Importin subunit alpha-1A; transport protein, nuclear localization signal; 2.00A {Oryza sativa japonica group} PDB: 4b8o_A 2yns_A 4b8p_A
Probab=98.97 E-value=1.2e-08 Score=133.14 Aligned_cols=379 Identities=12% Similarity=0.078 Sum_probs=254.1
Q ss_pred HHHHhhhccCCHHHHHHHHHHHHHHHHhcc-cc-c-----hHHHHHHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHcCC
Q 000156 604 ADTVGQLKSAVWKERLEAISSLRQQVEAVQ-NL-D-----QSVEILVRLVCMLPGWSEKNVQVQQQVIEVINYLAATATK 676 (2015)
Q Consensus 604 ~~l~~~L~s~~Wk~Rl~a~e~L~~~v~~~~-~~-~-----~~~~~Lv~~L~~~pg~~DsN~qV~~~~Le~l~~l~~~~~~ 676 (2015)
+.+++.|.+.++..|..|+..|..++.... +. . .....|+.+|. .+.+..++..++.+|..++...+.
T Consensus 77 ~~lv~~L~s~~~~~~~~A~~~L~~l~s~~~~~~~~~~~~~g~v~~Lv~lL~-----~~~~~~v~~~A~~~L~~l~~~~~~ 151 (528)
T 4b8j_A 77 PAMIGGVYSDDNNLQLEATTQFRKLLSIERSPPIEEVIQSGVVPRFVQFLT-----REDFPQLQFEAAWALTNIASGTSE 151 (528)
T ss_dssp HHHHHHHTSSCHHHHHHHHHHHHHHHTCSSSCCHHHHHHTTCHHHHHHHHT-----CTTCHHHHHHHHHHHHHHHTSCHH
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHhcCCCCchHHHHHHCCCHHHHHHHhC-----CCCCHHHHHHHHHHHHHHhCCCHH
Confidence 678899999999999999999998876532 11 1 12345555553 122377888899999888763211
Q ss_pred CchhHH-HHHHHHHHhhhcc--hhhhHHHHHHHHHHHhhhCh--hH-----HHHHHHHHhhhCCChhHHHHHHHHHHHHH
Q 000156 677 FPKKCV-VLCLLGISERVAD--IKTRAHAMKCLTTFSEAVGP--GF-----IFERLYKIMKDHKNPKVLSEGILWMVSAV 746 (2015)
Q Consensus 677 ~~~~~~-~~il~~LveKlgD--~K~r~~a~~~L~~l~e~~~~--~~-----Vl~~L~~~l~~~KnpKv~~~~l~~L~~li 746 (2015)
.....+ ..+++.|+.-+.+ ..++..|..+|..++..... .. +++.|+..+..+.++.++..++..|..+.
T Consensus 152 ~~~~~~~~g~i~~L~~lL~~~~~~v~~~a~~aL~~l~~~~~~~~~~i~~~g~l~~Ll~lL~~~~~~~v~~~a~~~L~~L~ 231 (528)
T 4b8j_A 152 NTKVVIDHGAVPIFVKLLGSSSDDVREQAVWALGNVAGDSPKCRDLVLANGALLPLLAQLNEHTKLSMLRNATWTLSNFC 231 (528)
T ss_dssp HHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHHHTCHHHHHHHHHTTCHHHHHHTCCTTCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHhCCcHHHHHHHhcCCCHHHHHHHHHHHHHHhCCChhhHHHHHHCCcHHHHHHHHhcCCCHHHHHHHHHHHHHHH
Confidence 111111 1367888877765 46899999999999864221 11 35566666546788999999999999887
Q ss_pred HHhCCCC-CChhhHHHHHHhcCCCCCchhHHHHHHHHHHHHHHHhChhHHhhhhhccHHHHHHHHHHHhcCCCCCCCCCc
Q 000156 747 EDFGVSH-LKLKDLIDFCKDTGLQSSAAATRNATIKLLGALHKFVGPDIKGFLADVKPALLSALDAEYEKNPFEGTVVPK 825 (2015)
Q Consensus 747 ~~fG~~~-l~~k~li~~l~~~gL~~sn~~VR~aA~~ll~~Ly~~~G~~l~~~L~~lkp~ll~~Le~ef~k~~~~~~p~p~ 825 (2015)
....... .-...+++.+..+ +.+.++.||..|..+|+.|......... .+-.
T Consensus 232 ~~~~~~~~~~~~~~l~~L~~l-L~~~~~~v~~~a~~aL~~l~~~~~~~~~------------~~~~-------------- 284 (528)
T 4b8j_A 232 RGKPQPSFEQTRPALPALARL-IHSNDEEVLTDACWALSYLSDGTNDKIQ------------AVIE-------------- 284 (528)
T ss_dssp CSSSCCCHHHHTTHHHHHHHH-TTCCCHHHHHHHHHHHHHHTSSCHHHHH------------HHHH--------------
T ss_pred cCCCCCcHHHHHHHHHHHHHH-HCCCCHHHHHHHHHHHHHHHcCCHHHHH------------HHHH--------------
Confidence 6432111 1135678888888 9999999999999998876532111111 0000
Q ss_pred ccccCccccCCCCCCCCCCCCCcccccccchHHHHhcCCCChHHHHHHHHHHHHHHHhccccCCCCChhhHHHHHHhccc
Q 000156 826 KTVRASESTSSVSSGGSDGLPREDISGKFTPTLVKSLESPDWKVRLESIEAVNKILEEANKRIQPAGTGELFGGLRGRLY 905 (2015)
Q Consensus 826 R~~r~~~~~~s~~~~~~d~lprvdIs~~L~~~ll~~l~d~~Wk~R~eale~L~~ll~~a~~~I~~~~~~eL~~~L~~rL~ 905 (2015)
..+.+.++..+.+.+|.+|..|+..|..++.........-.-..+++.|...|.
T Consensus 285 --------------------------~g~v~~Lv~lL~~~~~~v~~~a~~~L~nl~~~~~~~~~~~~~~~~l~~L~~lL~ 338 (528)
T 4b8j_A 285 --------------------------AGVCPRLVELLLHPSPSVLIPALRTVGNIVTGDDAQTQCIIDHQALPCLLSLLT 338 (528)
T ss_dssp --------------------------TTCHHHHHHHTTCSCHHHHHHHHHHHHHHTTSCHHHHHHHHTTTHHHHHHHHHH
T ss_pred --------------------------cCHHHHHHHHHcCCChhHHHHHHHHHHHHHcCCHHHHHHHHHhhhHHHHHHHHc
Confidence 003456788888999999999999999887521110100001346788888888
Q ss_pred cc-hHHHHHHHHHHHHHHHHHhChhhHHhh-hHHHHHHHHHhCCCcHHHHHHHHHHHHHHHHhcCc--------hhhHHH
Q 000156 906 DS-NKNLVMATLITLGAVASAMGPAVEKSS-KGVLSDILKCLGDNKKHMRECTLTVLDAWLAAVHL--------DKMVPY 975 (2015)
Q Consensus 906 Ds-N~~V~~~Al~~l~~La~alg~~f~~~~-~~llp~ll~~L~D~k~~Vr~aa~~aL~~i~~~~gl--------~~ll~~ 975 (2015)
+. +..|+..|+.+|+.|+..-........ ..++|.++..|.+....++..|..+|..++...+. ..+++.
T Consensus 339 ~~~~~~v~~~A~~~L~nl~~~~~~~~~~~~~~~~i~~L~~lL~~~~~~v~~~a~~aL~nl~~~~~~~~~~~l~~~~~i~~ 418 (528)
T 4b8j_A 339 QNLKKSIKKEACWTISNITAGNKDQIQAVINAGIIGPLVNLLQTAEFDIKKEAAWAISNATSGGSHDQIKYLVSEGCIKP 418 (528)
T ss_dssp SCCCHHHHHHHHHHHHHHHTSCHHHHHHHHHTTCHHHHHHHHHHSCHHHHHHHHHHHHHHHHHSCHHHHHHHHHTTCHHH
T ss_pred CCCcHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHhcCCHHHHHHHHHHHHHHHcCCCHHHHHHHHHCCCHHH
Confidence 88 999999999999999863222222222 36789999999999999999999999999877321 246777
Q ss_pred HHHHHhcCCCChhHHHHHHHHHHHHhccCCC--------CCChhh------hHHHHHhhcCCCChHHHHHHHHHHHHHHH
Q 000156 976 VTTALTDAKLGAEGRKDLFDWLSKQLTGLSG--------FPDAAH------LLKPASIAMTDKSSDVRKAAEACIVEILR 1041 (2015)
Q Consensus 976 l~~~L~~~k~~p~~R~~~l~~L~~~l~~~~~--------~~~~~~------ll~pl~~~L~D~~~~VR~aA~~~L~~l~~ 1041 (2015)
+...|.++ ++.++..++..|...+..... ...+.. .+..+..+..+.+.+|++.|..++..+..
T Consensus 419 L~~lL~~~--d~~v~~~al~~L~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~l~~L~~~~~~~v~~~a~~il~~~~~ 496 (528)
T 4b8j_A 419 LCDLLICP--DIRIVTVCLEGLENILKVGETDKTLAAGDVNVFSQMIDEAEGLEKIENLQSHDNNEIYEKAVKILEAYWM 496 (528)
T ss_dssp HHHGGGCS--CHHHHHHHHHHHHHHHHHHHHHHHHHTCSCCHHHHHHHHTTHHHHHHHGGGCSSHHHHHHHHHHHHHHCC
T ss_pred HHHHHcCC--CHHHHHHHHHHHHHHHHHHHHhhhcccccccHHHHHHHHCCcHHHHHHHHcCCCHHHHHHHHHHHHHHCC
Confidence 88888765 578888877777665532211 111111 23446667789999999999988876644
Q ss_pred H
Q 000156 1042 A 1042 (2015)
Q Consensus 1042 ~ 1042 (2015)
.
T Consensus 497 ~ 497 (528)
T 4b8j_A 497 D 497 (528)
T ss_dssp -
T ss_pred C
Confidence 3
No 36
>1w63_A Adapter-related protein complex 1 gamma 1 subunit; endocytosis, clathrin adaptor, transport, coated PITS; 4.0A {Mus musculus} SCOP: i.23.1.1
Probab=98.96 E-value=1.3e-06 Score=115.88 Aligned_cols=343 Identities=12% Similarity=0.089 Sum_probs=183.5
Q ss_pred HHHHHHHHhhccCCC--CchHHHhhhhhhHhhhcCCcHHHHHHHHHHHHHHHHHhchhhhhhHHHHHHHHHHhhcC-CCh
Q 000156 31 ANIDLAALCDSITDP--KDNRIRELGPLFKKTVADSNAPVQDKALDALIAYLKAADADAGRYAKEVCDAIAAKCLT-GRP 107 (2015)
Q Consensus 31 ayeeL~~~~~~~~d~--~~~~~~~~~~~~~k~v~DsN~~vqe~~leal~~~l~~~~~~~~~~~~~v~~~LieK~l~-~k~ 107 (2015)
++.++++.++..... .......-..-+++-+.+.+....-.++.-+..+.-. |.+......+++ |++. .+-
T Consensus 11 ~l~~~i~~ir~~~~~~~e~~~i~~e~~~ir~~l~~~~~~~k~~~l~kli~~~~~-G~d~~~~~~~vi-----k~~~s~~~ 84 (618)
T 1w63_A 11 RLRELIRTIRTARTQAEEREMIQKECAAIRSSFREEDNTYRCRNVAKLLYMHML-GYPAHFGQLECL-----KLIASQKF 84 (618)
T ss_dssp CHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHHHTTTCTTTHHHHHHHHHHHHHT-TCCCGGGHHHHH-----HHHHSSSH
T ss_pred cHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHhhCCCHHHHHHHHHHHHHHHHc-CCCCcchHHHHH-----HHHcCCch
Confidence 356777777653210 0011112233445566666655555555555544333 333322333444 3333 466
Q ss_pred hHHHHHHHHHHHHHhhhhhh---hHHHHHHHHhhcCChhhHHHHHHHHHHHHHHhCCCCcChhHHHhhhhhhhcCCChhH
Q 000156 108 KTVEKAQAVFMLWVELEAVD---VFLDVMEKAIKNKVAKAVVPAIDVMFQALSEFGAKIIPPKRILKMLPELFDHQDQNV 184 (2015)
Q Consensus 108 ~~k~~a~~~ll~~~E~~~~~---~v~~~L~~~~~~KnpKv~~~~l~~L~~~l~~fG~~~i~~k~il~~l~~ll~~~d~~V 184 (2015)
..|..+--.+..|.+. +++ -++..|.+-+.++||-++..|+.+|..+ |...+ ...+++.+.++|.|+++.|
T Consensus 85 ~~Krl~Yl~~~~~~~~-~~e~~~l~in~l~kDL~~~n~~vr~lAL~~L~~i----~~~~~-~~~l~~~l~~~L~~~~~~V 158 (618)
T 1w63_A 85 TDKRIGYLGAMLLLDE-RQDVHLLMTNCIKNDLNHSTQFVQGLALCTLGCM----GSSEM-CRDLAGEVEKLLKTSNSYL 158 (618)
T ss_dssp HHHHHHHHHHHHHCCC-CHHHHHHHHHHHHHHHSCSSSHHHHHHHHHHHHH----CCHHH-HHHHHHHHHHHHHSCCHHH
T ss_pred HHHHHHHHHHHHHhCC-CcHHHHHHHHHHHHhcCCCCHhHHHHHHHHHHhc----CCHHH-HHHHHHHHHHHHcCCCHHH
Confidence 6777765555555542 344 3567888899999999999999998765 32111 3567899999999999999
Q ss_pred HHHHHHHHHHHHHHhCCchhhHHHhhhChHHHHHHHHHHHHhcCCCCCCCccchhhhhHhhhhhccccCCCCCCCCCCCC
Q 000156 185 RASSKGLTLELCRWIGKDPVKTILFEKMRDTMKKELEVELVNVSGTARPTRKIRAEQDKELGQELISEDVGPGPSEESTA 264 (2015)
Q Consensus 185 R~~a~~l~~ely~~lG~~~l~~~l~~~Lk~~q~keLe~~f~k~~~~~~P~R~~rs~~~~~~~~ea~~~~~~~~~~~~~~~ 264 (2015)
|..|..++..+|+...+ .+.. +++.+
T Consensus 159 Rk~A~~al~~l~~~~p~-~v~~-~~~~l---------------------------------------------------- 184 (618)
T 1w63_A 159 RKKAALCAVHVIRKVPE-LMEM-FLPAT---------------------------------------------------- 184 (618)
T ss_dssp HHHHHHHHHHHHHHCGG-GGGG-GGGGT----------------------------------------------------
T ss_pred HHHHHHHHHHHHHHChH-HHHH-HHHHH----------------------------------------------------
Confidence 99999999999986532 2311 11110
Q ss_pred CCCCCCCCCCCCCcccccccCcchhhhhhhccCChHHHHHHHHHHHHHhcC-CCC---CCCChHHHHHHHHHHhc-----
Q 000156 265 DVPPEIDEYELVDPVDILTPLEKSGFWEGVKATKWSERKDAVAELTKLAST-KRI---APGDFTEVCRTLKKLIT----- 335 (2015)
Q Consensus 265 ~~~~~iD~~dl~~~vdIl~kl~~~~f~~~l~s~kWkeR~eaL~~L~~l~~~-~ki---~~~~y~~l~~~L~k~l~----- 335 (2015)
.+.+.+.+-..+..|+..|..+... +.. .......++..|...+.
T Consensus 185 --------------------------~~lL~D~d~~V~~~Al~~L~~i~~~~~~~~~~~~~~v~~l~~~L~~~~~~~~~~ 238 (618)
T 1w63_A 185 --------------------------KNLLNEKNHGVLHTSVVLLTEMCERSPDMLAHFRKLVPQLVRILKNLIMSGYSP 238 (618)
T ss_dssp --------------------------TTSTTCCCHHHHHHHHHHHHHHCCSHHHHHHHHHTTHHHHHHHHHHHHHSCCCT
T ss_pred --------------------------HHHhCCCCHhHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHcCCCCc
Confidence 0001111222222333333332210 000 00011223333333211
Q ss_pred ------ccCHHHHHHHHHHHHHHHHHhhhcchhhhHhHHHHHHHHhccCcHHHHHHHHHHHHHHHHhcCCCh---HhHHH
Q 000156 336 ------DVNIAVAVEAIQAIGNLARGLRTHFSGSSRFLLPVLLEKLKEKKPTVAESLTQTLQAMHKAGCLNL---VDVVE 406 (2015)
Q Consensus 336 ------D~N~~V~~~A~~~l~~La~~L~~~f~~~~~~llp~LL~klkdkk~~V~~aa~~aL~al~~~~~~~l---~~il~ 406 (2015)
..+.-+....+++++.++..- +........+++.++......+..-..-..+|+.+++.- .... ..+++
T Consensus 239 ~~~~~~~~~~~~q~~il~~L~~l~~~~-~~~~~~~~~~L~~l~~~~~~~~~~~~aV~~ea~~~i~~l-~~~~~l~~~a~~ 316 (618)
T 1w63_A 239 EHDVSGISDPFLQVRILRLLRILGRND-DDSSEAMNDILAQVATNTETSKNVGNAILYETVLTIMDI-KSESGLRVLAIN 316 (618)
T ss_dssp TTCSSSSSCHHHHHHHHHHHHHHTTTC-HHHHHTTHHHHHHHHHTSCCSSTHHHHHHHHHHHHHHHS-CCCHHHHHHHHH
T ss_pred cccccCCCCChHHHHHHHHHHHhCCCC-HHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHhc-CCCHHHHHHHHH
Confidence 134444455566666655320 111112233444454433222211122223344444432 1111 13456
Q ss_pred HHHHHhhcCChHHHHHHHHHHHHHHHhcChhHHHHhhhhHHHHHHHHhcCCCHHHHHHHHHHHHHH
Q 000156 407 DVKTSVKNKVPLVRSLTLNWVTFCIETSSKAAVLKVHKDYVPICMECLNDGTPEVRDAAFSVLAAI 472 (2015)
Q Consensus 407 ~l~~~L~~Knp~vR~~~l~~L~~~l~~~~~~~l~~~l~~l~p~l~k~L~Ds~~~VR~aA~~al~~l 472 (2015)
.+...+.++++.+|..++.+|..+....+. .+....+.+..|+.|.+..||..|.+++..+
T Consensus 317 ~L~~~L~~~d~~vr~~aL~~L~~i~~~~p~-----~~~~~~~~i~~~l~d~d~~Ir~~alelL~~l 377 (618)
T 1w63_A 317 ILGRFLLNNDKNIRYVALTSLLKTVQTDHN-----AVQRHRSTIVDCLKDLDVSIKRRAMELSFAL 377 (618)
T ss_dssp HHHHHHTCSSTTTHHHHHHHHHHHHHHHHH-----HHGGGHHHHHHGGGSSCHHHHHHHHHHHHHH
T ss_pred HHHHHHhCCCCchHHHHHHHHHHHHhhCHH-----HHHHHHHHHHHHccCCChhHHHHHHHHHHHH
Confidence 666778889999999999999988765432 2355667899999999999999998877654
No 37
>1wa5_C Importin alpha RE-exporter; nuclear transport/complex, nuclear transport, exportin, RAN GTPase, protein transport; HET: GTP; 2.0A {Saccharomyces cerevisiae} SCOP: a.118.1.1 PDB: 1z3h_A
Probab=98.89 E-value=0.00012 Score=102.25 Aligned_cols=330 Identities=9% Similarity=0.065 Sum_probs=184.8
Q ss_pred CCHHHHHHHHHHHHHHHHhcc----ccc------hHHHHHHHHHhcCCCCccc---HHHHHHHHHHHHHHHHHHcCCCch
Q 000156 613 AVWKERLEAISSLRQQVEAVQ----NLD------QSVEILVRLVCMLPGWSEK---NVQVQQQVIEVINYLAATATKFPK 679 (2015)
Q Consensus 613 ~~Wk~Rl~a~e~L~~~v~~~~----~~~------~~~~~Lv~~L~~~pg~~Ds---N~qV~~~~Le~l~~l~~~~~~~~~ 679 (2015)
.+|+.|.+|+..++.+..... ... ...+.+...+ .|.+.|. +..|+..++.++..+.+.. .+
T Consensus 417 ~~w~~reaal~algaia~~~~~~~~~~~~~~~~~~l~~~l~~~v--~p~l~~~~~~~p~vr~~a~~~lg~~~~~~---~~ 491 (960)
T 1wa5_C 417 KNWKFKDLYIYLFTALAINGNITNAGVSSTNNLLNVVDFFTKEI--APDLTSNNIPHIILRVDAIKYIYTFRNQL---TK 491 (960)
T ss_dssp -CHHHHHHHHHHHHHHHBSSCCBTTBCCCBCTTCCHHHHHHHHT--HHHHHCSSCSCHHHHHHHHHHHHHTGGGS---CH
T ss_pred hhHHHHHHHHHHHHHHHHHhccccCCcccccccccHHHHHHHHh--HHHhcCCCCCCceehHHHHHHHHHHHhhC---CH
Confidence 579999999999998865321 011 1112222221 1334455 8899999999998877643 45
Q ss_pred hHHHHHHHHHHhhhcch--hhhHHHHHHHHHHHhhhC-----------------hhHHHHHHHHHhhhCCC---hh--HH
Q 000156 680 KCVVLCLLGISERVADI--KTRAHAMKCLTTFSEAVG-----------------PGFIFERLYKIMKDHKN---PK--VL 735 (2015)
Q Consensus 680 ~~~~~il~~LveKlgD~--K~r~~a~~~L~~l~e~~~-----------------~~~Vl~~L~~~l~~~Kn---pK--v~ 735 (2015)
..+..+++.++..+.|. .++..|..+|..+++... ...+++.++..+ +..+ ++ ..
T Consensus 492 ~~l~~~l~~l~~~L~d~~~~V~~~A~~Al~~~~~~~~~~~~~~~~~~~~~l~p~l~~ll~~L~~ll-~~~~~~~~~~~~~ 570 (960)
T 1wa5_C 492 AQLIELMPILATFLQTDEYVVYTYAAITIEKILTIRESNTSPAFIFHKEDISNSTEILLKNLIALI-LKHGSSPEKLAEN 570 (960)
T ss_dssp HHHHHHHHHHHHHTTCSCHHHHHHHHHHHHHHTTCBSCSSSCCBSSCGGGTTTTHHHHHHHHHHHH-HTTCCCHHHHTSC
T ss_pred HHHHHHHHHHHHHhCCCChhHHHHHHHHHHHHHhcccccccccccccHHHhhhhHHHHHHHHHHHH-HhccCCCCccccc
Confidence 67888899999988884 579999999999988421 122444444443 2221 22 34
Q ss_pred HHHHHHHHHHHHHhCCCCCC-hhhH----HHHHHhcCCC-CCchhHHHHHHHHHHHHHHHhChh-HHhhhhhccHHHHHH
Q 000156 736 SEGILWMVSAVEDFGVSHLK-LKDL----IDFCKDTGLQ-SSAAATRNATIKLLGALHKFVGPD-IKGFLADVKPALLSA 808 (2015)
Q Consensus 736 ~~~l~~L~~li~~fG~~~l~-~k~l----i~~l~~~gL~-~sn~~VR~aA~~ll~~Ly~~~G~~-l~~~L~~lkp~ll~~ 808 (2015)
...+..|..++..++....+ ...+ +..+... .. ..++..+....++++.+.+..|+. +..+.+.+-|.+...
T Consensus 571 e~l~~al~~vv~~~~~~~~p~~~~l~~~L~~~l~~~-~~~~~~~~~~~~~~e~l~~l~~~~~~~~~~~~~~~~~p~~~~i 649 (960)
T 1wa5_C 571 EFLMRSIFRVLQTSEDSIQPLFPQLLAQFIEIVTIM-AKNPSNPRFTHYTFESIGAILNYTQRQNLPLLVDSMMPTFLTV 649 (960)
T ss_dssp HHHHHHHHHHHHHHTTTTGGGHHHHHHHHHHHHHHH-TTSCCCHHHHHHHHHHHHHHHHTSCGGGHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHH-HhCCCCcHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHH
Confidence 56677777777777643222 2223 3333333 33 357888988999999999887764 344445555555554
Q ss_pred HHHHHhcCCCCCCCCCcccccCccccCCCCCCCCCCCCCcccccccchHHH--HhcCCCChHHHHHHHHHHHHHHHhccc
Q 000156 809 LDAEYEKNPFEGTVVPKKTVRASESTSSVSSGGSDGLPREDISGKFTPTLV--KSLESPDWKVRLESIEAVNKILEEANK 886 (2015)
Q Consensus 809 Le~ef~k~~~~~~p~p~R~~r~~~~~~s~~~~~~d~lprvdIs~~L~~~ll--~~l~d~~Wk~R~eale~L~~ll~~a~~ 886 (2015)
++..........-..-...+... +.+++ ....+-+-++ ..+....|- -..+..|...+.....
T Consensus 650 L~~~~~~~~~~~~~i~~~l~~~~-----------~~~~~--~~~~~~~~l~~~~~~~~~~~~--~~~~~~L~~~~~~~~~ 714 (960)
T 1wa5_C 650 FSEDIQEFIPYVFQIIAFVVEQS-----------ATIPE--SIKPLAQPLLAPNVWELKGNI--PAVTRLLKSFIKTDSS 714 (960)
T ss_dssp HHTTCTTTHHHHHHHHHHHHHHC-----------SSCCT--TTGGGHHHHTSGGGGCCTTTH--HHHHHHHHHHHHHHGG
T ss_pred HHhhhHhhHHHHHHHHHHHHHhc-----------cCCCH--HHHHHHHHHcCHHHhcCCCCc--hhHHHHHHHHHHhChH
Confidence 43211000000000000000000 00110 0111112222 222222221 1344455555543222
Q ss_pred cCCCCChhhHHHHHHhccccchHHHHHHHHHHHHHHHHHhChh-hHHhhhHHHHHHHHHhCCCc-HHHHHHHHHHHHHHH
Q 000156 887 RIQPAGTGELFGGLRGRLYDSNKNLVMATLITLGAVASAMGPA-VEKSSKGVLSDILKCLGDNK-KHMRECTLTVLDAWL 964 (2015)
Q Consensus 887 ~I~~~~~~eL~~~L~~rL~DsN~~V~~~Al~~l~~La~alg~~-f~~~~~~llp~ll~~L~D~k-~~Vr~aa~~aL~~i~ 964 (2015)
.+.. ...++..+...+.+.+. ...++.+++.++..+|.. |.+|+..+++.++..+...+ ..++......+..++
T Consensus 715 ~~~~--~~~~l~~~~~~~~~~~~--~~~a~~ll~~i~~~~~~~~~~~yl~~i~~~l~~~l~~~~~~~~~~~~l~~~~~~~ 790 (960)
T 1wa5_C 715 IFPD--LVPVLGIFQRLIASKAY--EVHGFDLLEHIMLLIDMNRLRPYIKQIAVLLLQRLQNSKTERYVKKLTVFFGLIS 790 (960)
T ss_dssp GCSC--SHHHHHHHHHHHTCTTT--HHHHHHHHHHHHHHSCHHHHGGGHHHHHHHHHHGGGSSCCHHHHHHHHHHHHHHH
T ss_pred HHHH--HHHHHHHHHHHhCCCcc--cchHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHhhCCcHhHHHHHHHHHHHHH
Confidence 2322 24466666666655432 378999999999999999 99999999999999997764 445545544554444
Q ss_pred HhcC
Q 000156 965 AAVH 968 (2015)
Q Consensus 965 ~~~g 968 (2015)
-..+
T Consensus 791 ~~~~ 794 (960)
T 1wa5_C 791 NKLG 794 (960)
T ss_dssp HHHC
T ss_pred HHcC
Confidence 3444
No 38
>2z6g_A B-catenin; FULL-length, beta-catenin, cell adhesion; 3.40A {Danio rerio}
Probab=98.87 E-value=2.6e-06 Score=116.07 Aligned_cols=518 Identities=13% Similarity=0.079 Sum_probs=299.0
Q ss_pred hhhhhhccCChHHHHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHhhhcchh-hhHhH
Q 000156 289 GFWEGVKATKWSERKDAVAELTKLASTKRIAPGDFTEVCRTLKKLITDVNIAVAVEAIQAIGNLARGLRTHFSG-SSRFL 367 (2015)
Q Consensus 289 ~f~~~l~s~kWkeR~eaL~~L~~l~~~~ki~~~~y~~l~~~L~k~l~D~N~~V~~~A~~~l~~La~~L~~~f~~-~~~~l 367 (2015)
.+...+.+.+...|..++..++.+.. ..+. ...++.|.+.+.+.+..|+..|+.+|..|+..-.....- ....+
T Consensus 119 ~lv~~L~~~~~~~r~~a~~~l~~~~~-~~i~----~g~ip~Lv~lL~~~d~~vr~~A~~~L~~L~~~~~~~~~i~~~~~~ 193 (780)
T 2z6g_A 119 TNVQRLAEPSQMLKHAVVNLINYQDD-AELA----TRAIPELTKLLNDEDQVVVNKAAVMVHQLSKKEASRHAIMRSPQM 193 (780)
T ss_dssp -------CCSCHHHHHHHHHHHHHHH-HHHH----HHHHHHHHHHHHCSCHHHHHHHHHHHHHHHTSHHHHHHHTTCHHH
T ss_pred HHHHHhcCccHHHHHHHHHHHHhhhH-HHHH----hCCHHHHHHHHCCCCHHHHHHHHHHHHHHhCCChhHHHHHhccCh
Confidence 57777888888888888887765421 1111 456777777888889999999999999998743221111 12468
Q ss_pred HHHHHHHhccC-cHHHHHHHHHHHHHHHHh--c--CCChHhHHHHHHHHhhcCChHHHHHHHHHHHHHHHhcChhHHHHh
Q 000156 368 LPVLLEKLKEK-KPTVAESLTQTLQAMHKA--G--CLNLVDVVEDVKTSVKNKVPLVRSLTLNWVTFCIETSSKAAVLKV 442 (2015)
Q Consensus 368 lp~LL~klkdk-k~~V~~aa~~aL~al~~~--~--~~~l~~il~~l~~~L~~Knp~vR~~~l~~L~~~l~~~~~~~l~~~ 442 (2015)
++.|+..+++. ...++..+..+|..+... + ...-...++.|+..|++.++.+|..++..|..+........ ...
T Consensus 194 i~~Lv~~L~~~~d~~vr~~Aa~aL~~Ls~~~~~~~~i~~~g~I~~Lv~lL~~~~~~v~~~A~~aL~nLa~~~~~~~-~~v 272 (780)
T 2z6g_A 194 VSAIVRTMQNTNDVETARCTSGTLHNLSHHREGLLAIFKSGGIPALVNMLGSPVDSVLFHAITTLHNLLLHQEGAK-MAV 272 (780)
T ss_dssp HHHHHHHHHHCCCHHHHHHHHHHHHHHHTSHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHHHHSTTHH-HHH
T ss_pred HHHHHHHHcCCCCHHHHHHHHHHHHHHhCCchhHHHHHHcCCHHHHHHHHcCCCHHHHHHHHHHHHHHhCCChhhH-HHH
Confidence 99999999754 788999999999886532 0 00012467888899999999999999999998776543211 111
Q ss_pred -hhhHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhCchHHHHHHHhccHHHHHHHHHHHhcCCCCCCCCCCCccccCCCC
Q 000156 443 -HKDYVPICMECLNDGTPEVRDAAFSVLAAIAKSVGMRPLERSIEKLDDVRRNKLSEMIAGSGGDVATGTSSARVQTSGG 521 (2015)
Q Consensus 443 -l~~l~p~l~k~L~Ds~~~VR~aA~~al~~l~~~~Ge~~~~~~l~~Ld~~~~kkI~e~~~~~~~~~~~~~~~~~~~~~~~ 521 (2015)
-...+|.++++|.+.+..||..+..++..+.. +.......+-..+. ...+...+...
T Consensus 273 ~~~g~v~~Lv~lL~~~~~~v~~~a~~aL~~La~--~~~e~~~~i~~~~~--i~~Lv~lL~~~------------------ 330 (780)
T 2z6g_A 273 RLAGGLQKMVALLNKTNVKFLAITTDCLQILAY--GNQESKLIILASGG--PQALVNIMRTY------------------ 330 (780)
T ss_dssp HHTTHHHHHHHGGGCCCHHHHHHHHHHHHHHHT--TCHHHHHHHHTTTH--HHHHHHHHTTC------------------
T ss_pred HHcCCHHHHHHHHhcCCHHHHHHHHHHHHHHhc--CChHHHHHHHHcCC--HHHHHHHHhcC------------------
Confidence 14688999999999999999999999986652 33211111100000 00111111000
Q ss_pred CCCCCCCCcccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcCCCCCCCCCCCCCCCCCHHHHHHHhhcc
Q 000156 522 SVPSVEASESSFVRKSAASMLSGKRPVSAAPASKKGGPVKPSAKKDGSGKQETSKLTEAPEDVEPSEMSLEEIESRLGSL 601 (2015)
Q Consensus 522 s~~~~~~~~~~~~~~~~~s~~~~~~P~~~~~~~~k~~~~k~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~ee~e~~~~~l 601 (2015)
+.+.....+
T Consensus 331 --------------------------------------------------------------------~~~~~~~~a--- 339 (780)
T 2z6g_A 331 --------------------------------------------------------------------TYEKLLWTT--- 339 (780)
T ss_dssp --------------------------------------------------------------------CCHHHHHHH---
T ss_pred --------------------------------------------------------------------CHHHHHHHH---
Confidence 001111000
Q ss_pred CcHHHHhhhcc-CCHHHHHHHHHHHHHHHHhccccchHHHHHHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHcCCCchh
Q 000156 602 IPADTVGQLKS-AVWKERLEAISSLRQQVEAVQNLDQSVEILVRLVCMLPGWSEKNVQVQQQVIEVINYLAATATKFPKK 680 (2015)
Q Consensus 602 l~~~l~~~L~s-~~Wk~Rl~a~e~L~~~v~~~~~~~~~~~~Lv~~L~~~pg~~DsN~qV~~~~Le~l~~l~~~~~~~~~~ 680 (2015)
..++..|.. ...+.. ++.. .....|+.+ +.+.+..+...++.+|..++.......
T Consensus 340 --~~aL~~Ls~~~~~~~~---------i~~~-----g~l~~Ll~l------L~~~~~~~~~~a~~~L~~L~~~~~~~~-- 395 (780)
T 2z6g_A 340 --SRVLKVLSVCSSNKPA---------IVEA-----GGMQALGLH------LTDPSQRLVQNCLWTLRNLSDAATKQE-- 395 (780)
T ss_dssp --HHHHHHHHTSTTHHHH---------HHHT-----THHHHHGGG------TTCSCHHHHHHHHHHHHHHHTTCTTCS--
T ss_pred --HHHHHHhhcChHHHHH---------HHHh-----chHHHHHHH------HcCCchHHHHHHHHHHHHHhccchhhh--
Confidence 011111111 111110 0000 012223322 345566677888888888876443321
Q ss_pred HHHHHHHHHHhhhcc--hhhhHHHHHHHHHHHhhhCh-------hHHHHHHHHHhhhCCC-hhHHHHHHHHHHHHHHHhC
Q 000156 681 CVVLCLLGISERVAD--IKTRAHAMKCLTTFSEAVGP-------GFIFERLYKIMKDHKN-PKVLSEGILWMVSAVEDFG 750 (2015)
Q Consensus 681 ~~~~il~~LveKlgD--~K~r~~a~~~L~~l~e~~~~-------~~Vl~~L~~~l~~~Kn-pKv~~~~l~~L~~li~~fG 750 (2015)
....+++.|+..+.+ ..++..|..+|..++..... .-.++.|+..+....+ ..++..++..|.++....+
T Consensus 396 ~~~~~i~~Lv~lL~~~d~~vr~~A~~aL~~L~~~~~~~~~~i~~~g~i~~Lv~lL~~~~~~~~v~~~Al~aL~nL~~~~~ 475 (780)
T 2z6g_A 396 GMEGLLGTLVQLLGSDDINVVTCAAGILSNLTCNNYKNKMMVCQVGGIEALVRTVLRAGDREDITEPAICALRHLTSRHQ 475 (780)
T ss_dssp CCHHHHHHHHHHTTCSCHHHHHHHHHHHHHHTSSCHHHHHHHHTTTHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTSSST
T ss_pred hhhhHHHHHHHHHcCCCHHHHHHHHHHHHHHHhCCHHHHHHHHHCCCHHHHHHHHHccCCHHHHHHHHHHHHHHHHhcCc
Confidence 234577888776654 56888888888887653210 1246666666644333 4899999888887643211
Q ss_pred CC-----CCChhhHHHHHHhcCCCCCch-hHHHHHHHHHHHHHHHhChhHHhhh--hhccHHHHHHHHHHHhcCCCCCCC
Q 000156 751 VS-----HLKLKDLIDFCKDTGLQSSAA-ATRNATIKLLGALHKFVGPDIKGFL--ADVKPALLSALDAEYEKNPFEGTV 822 (2015)
Q Consensus 751 ~~-----~l~~k~li~~l~~~gL~~sn~-~VR~aA~~ll~~Ly~~~G~~l~~~L--~~lkp~ll~~Le~ef~k~~~~~~p 822 (2015)
.. .+-....++.+..+ |.+.+. .||.+|..+|+.|.. ++.....+ .++-|.+.+.+......++.+..-
T Consensus 476 ~~~~~~~~v~~~~~l~~L~~l-L~~~~~~~v~~~A~~aL~nLa~--~~~~~~~i~~~g~i~~Lv~lL~~~~~~~~~~aa~ 552 (780)
T 2z6g_A 476 DAEMAQNAVRLHYGLPVVVKL-LHPPSHWPLIKATVGLIRNLAL--CPANHAPLREQGAIPRLVQLLVRAHQDTQRRTSM 552 (780)
T ss_dssp THHHHHHHHHHTTCHHHHHHT-TSTTCCHHHHHHHHHHHHHHHS--SHHHHHHHHHTTHHHHHHHHHHHHHHHHHHTTC-
T ss_pred hHHHHHHHHHHcCCHHHHHHH-hcCCChHHHHHHHHHHHHHHhc--CHHHHHHHHHCCCHHHHHHHHHhcchhHHHHHhh
Confidence 10 00001235666666 777764 999999999998864 44333333 355677777776533221110000
Q ss_pred CCcccccCccccCCCCCCCCCCCCCcccccccchHHHHhcCCCChHHHHHHHHHHHHHHHhc-c-ccCCCCChhhHHHHH
Q 000156 823 VPKKTVRASESTSSVSSGGSDGLPREDISGKFTPTLVKSLESPDWKVRLESIEAVNKILEEA-N-KRIQPAGTGELFGGL 900 (2015)
Q Consensus 823 ~p~R~~r~~~~~~s~~~~~~d~lprvdIs~~L~~~ll~~l~d~~Wk~R~eale~L~~ll~~a-~-~~I~~~~~~eL~~~L 900 (2015)
+ .+... +. . +.....+|..++..|..+.... + ..+. -...++.|
T Consensus 553 a----------------l~nq~---------~~----~--~~~~~~v~~~a~~aL~~La~~~~~~~~l~---~~~~i~~L 598 (780)
T 2z6g_A 553 G----------------GTQQQ---------FV----E--GVRMEEIVEACTGALHILARDIHNRIVIR---GLNTIPLF 598 (780)
T ss_dssp ---------------------C---------CS----T--TCCHHHHHHHHHHHHHHHTTSHHHHHHHH---HTCCHHHH
T ss_pred c----------------cccch---------hh----c--ccChHHHHHHHHHHHHHHhcChhhHHHHH---HCCcHHHH
Confidence 0 00000 00 0 0011235556666666654210 0 0011 03457888
Q ss_pred HhccccchHHHHHHHHHHHHHHHHHhChhhHHhhhH--HHHHHHHHhCCCcHHHHHHHHHHHHHHHHhcC
Q 000156 901 RGRLYDSNKNLVMATLITLGAVASAMGPAVEKSSKG--VLSDILKCLGDNKKHMRECTLTVLDAWLAAVH 968 (2015)
Q Consensus 901 ~~rL~DsN~~V~~~Al~~l~~La~alg~~f~~~~~~--llp~ll~~L~D~k~~Vr~aa~~aL~~i~~~~g 968 (2015)
...|.+.+..|+..|+.++..|+. .+.....+.. .++.|+..+.+.+..||..|..+|..+...-+
T Consensus 599 v~lL~~~~~~v~~~a~~aL~~L~~--~~~~~~~i~~~g~i~~L~~Ll~~~~~~Vr~~A~~aL~~l~~~~~ 666 (780)
T 2z6g_A 599 VQLLYSPIENIQRVAAGVLCELAQ--DKEAAEAIEAEGATAPLTELLHSRNEGVATYAAAVLFRMSEDKP 666 (780)
T ss_dssp HHGGGCSCHHHHHHHHHHHHHHHT--SHHHHHHHHHTTCHHHHHHGGGCSCHHHHHHHHHHHHHHHTTSC
T ss_pred HHHHcCCCHHHHHHHHHHHHHHhc--CHHHHHHHHHCCCHHHHHHHHcCCCHHHHHHHHHHHHHHHcCCh
Confidence 999999999999999999998862 2334433333 67889999999999999999999999887654
No 39
>1wa5_C Importin alpha RE-exporter; nuclear transport/complex, nuclear transport, exportin, RAN GTPase, protein transport; HET: GTP; 2.0A {Saccharomyces cerevisiae} SCOP: a.118.1.1 PDB: 1z3h_A
Probab=98.80 E-value=3.3e-05 Score=108.03 Aligned_cols=538 Identities=12% Similarity=0.093 Sum_probs=298.5
Q ss_pred ccCChHHHHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHhc--ccCHHHHHHHHHHHHHHHHHhhh------cchhhh-H
Q 000156 295 KATKWSERKDAVAELTKLASTKRIAPGDFTEVCRTLKKLIT--DVNIAVAVEAIQAIGNLARGLRT------HFSGSS-R 365 (2015)
Q Consensus 295 ~s~kWkeR~eaL~~L~~l~~~~ki~~~~y~~l~~~L~k~l~--D~N~~V~~~A~~~l~~La~~L~~------~f~~~~-~ 365 (2015)
.+.+-..| |-+.|..+-+.| +| ...|...+. +.+..++..|+..++...+.--. .+.+.. .
T Consensus 15 ~spd~~~r--Ae~~L~~~~~~p-----~~---~~~L~~il~~~~~~~~vR~~A~i~lkn~i~~~w~~~~~~~~l~~~~k~ 84 (960)
T 1wa5_C 15 VIASTAKT--SERNLRQLETQD-----GF---GLTLLHVIASTNLPLSTRLAGALFFKNFIKRKWVDENGNHLLPANNVE 84 (960)
T ss_dssp TSGGGHHH--HHHHHHHHHTST-----TH---HHHHHHHHHCTTSCHHHHHHHHHHHHHHHHHHSBCSSSCBSSCHHHHH
T ss_pred cCCCHHHH--HHHHHHHhhcCC-----CH---HHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhcCCCcccCCCCCHHHHH
Confidence 34455566 777777764433 23 334444553 34678899999999888764211 222222 2
Q ss_pred hHHHHHHHHhccCcHHHHHHHHHHHHHHHHh-cCCChHhHHHHHHHHhhcCChHHHHHHHHHHHHHHHhcCh--------
Q 000156 366 FLLPVLLEKLKEKKPTVAESLTQTLQAMHKA-GCLNLVDVVEDVKTSVKNKVPLVRSLTLNWVTFCIETSSK-------- 436 (2015)
Q Consensus 366 ~llp~LL~klkdkk~~V~~aa~~aL~al~~~-~~~~l~~il~~l~~~L~~Knp~vR~~~l~~L~~~l~~~~~-------- 436 (2015)
.+=..++..+.+....||..+..++..++.+ .....+++++.|...+++.++..+.+++..|..+++.+..
T Consensus 85 ~ik~~ll~~l~~~~~~ir~~l~~~ia~ia~~d~p~~Wp~ll~~L~~~l~s~~~~~~~~aL~~l~~i~~~~~~~~~~~~~~ 164 (960)
T 1wa5_C 85 LIKKEIVPLMISLPNNLQVQIGEAISSIADSDFPDRWPTLLSDLASRLSNDDMVTNKGVLTVAHSIFKRWRPLFRSDELF 164 (960)
T ss_dssp HHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHSTTTCTTHHHHHHTTCCSSCTTHHHHHHHHHHHHHGGGTTSCCCHHHH
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhhCccchhHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHhhcChHHH
Confidence 2223445555455588999999999999886 2234678999999999888888999999999998886541
Q ss_pred hHHHHhhhhHHH----H---HHHHhcCCCH---HHHHHHHHHHHHHHHHhCc----hHHHHHHHhccHHHHHHHHHHHhc
Q 000156 437 AAVLKVHKDYVP----I---CMECLNDGTP---EVRDAAFSVLAAIAKSVGM----RPLERSIEKLDDVRRNKLSEMIAG 502 (2015)
Q Consensus 437 ~~l~~~l~~l~p----~---l~k~L~Ds~~---~VR~aA~~al~~l~~~~Ge----~~~~~~l~~Ld~~~~kkI~e~~~~ 502 (2015)
..+...+..+.+ . +..++.+... .+| .+.+++-.+.++++. ..-..+.+.++.- ...+..++..
T Consensus 165 ~~l~~~l~~~~~~ll~~~~~~~~~l~~~~~~~~~~~-~~~~~~~~~~k~~~~l~~~~~~~~~~~~~~~~-~~~~~~~l~~ 242 (960)
T 1wa5_C 165 LEIKLVLDVFTAPFLNLLKTVDEQITANENNKASLN-ILFDVLLVLIKLYYDFNCQDIPEFFEDNIQVG-MGIFHKYLSY 242 (960)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCCC--CHHHH-HHHHHHHHHHHHHHHHHSSCCCHHHHHTHHHH-HHHHHHHHSC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHH-HHHHHHHHHHHHHHHHhhccchHHHHHHHHHH-HHHHHHHHcC
Confidence 111112222333 2 2334665533 255 233333333333321 0000011111110 0111122211
Q ss_pred CCCCCCCCCCCccccCCCCCCCCCCCCcccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcCCCCCCCCC
Q 000156 503 SGGDVATGTSSARVQTSGGSVPSVEASESSFVRKSAASMLSGKRPVSAAPASKKGGPVKPSAKKDGSGKQETSKLTEAPE 582 (2015)
Q Consensus 503 ~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~s~~~~~~P~~~~~~~~k~~~~k~~~~~~~~~~~~~s~~~~~~~ 582 (2015)
. .|.. ..++ +
T Consensus 243 ~------------------------------------------~p~~---------------------------~~d~-d 252 (960)
T 1wa5_C 243 S------------------------------------------NPLL---------------------------EDPD-E 252 (960)
T ss_dssp C------------------------------------------SCCC---------------------------C-----
T ss_pred C------------------------------------------CCcc---------------------------cCCc-c
Confidence 0 0000 0000 0
Q ss_pred CCCCCCCCHHHHHHHhhccCcHHHHhhhccCCHHHHHHHHHHHHHHHHhccc-cchH----HHHHHHHHhcCCCCcccHH
Q 000156 583 DVEPSEMSLEEIESRLGSLIPADTVGQLKSAVWKERLEAISSLRQQVEAVQN-LDQS----VEILVRLVCMLPGWSEKNV 657 (2015)
Q Consensus 583 ~~~~~~~s~ee~e~~~~~ll~~~l~~~L~s~~Wk~Rl~a~e~L~~~v~~~~~-~~~~----~~~Lv~~L~~~pg~~DsN~ 657 (2015)
+.+.+ ..|+.|..+++.|..+++...+ ..+. .+.++..+... +-....-
T Consensus 253 ---~~~~~----------------------~~~~vk~~~~~~l~~l~~~~~~~f~~~~~~~~~~~~~~l~~~-~~~~~~~ 306 (960)
T 1wa5_C 253 ---TEHAS----------------------VLIKVKSSIQELVQLYTTRYEDVFGPMINEFIQITWNLLTSI-SNQPKYD 306 (960)
T ss_dssp -----CCC----------------------HHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHC-CSCTTSH
T ss_pred ---ccccc----------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCcCcH
Confidence 00001 1255565666666555543211 1111 22333333211 1012234
Q ss_pred HHHHHHHHHHHHHHHHc--CCCc--hhHHHHHH-HHHHhhh-----------------------cc--hhhhHHHHHHHH
Q 000156 658 QVQQQVIEVINYLAATA--TKFP--KKCVVLCL-LGISERV-----------------------AD--IKTRAHAMKCLT 707 (2015)
Q Consensus 658 qV~~~~Le~l~~l~~~~--~~~~--~~~~~~il-~~LveKl-----------------------gD--~K~r~~a~~~L~ 707 (2015)
.+...++++|..+++.- ..+. ...+..++ +.++..+ ++ ...|..|.++|.
T Consensus 307 ~~~~~al~fl~~~~~~~~~~~~~~~~~~l~~li~~~i~~~m~~~~~d~e~w~~dp~e~i~~d~e~~d~~s~R~aa~~~L~ 386 (960)
T 1wa5_C 307 ILVSKSLSFLTAVTRIPKYFEIFNNESAMNNITEQIILPNVTLREEDVELFEDDPIEYIRRDLEGSDTDTRRRACTDFLK 386 (960)
T ss_dssp HHHHHHHHHHHHHHTSHHHHGGGCSHHHHHHHHHHTHHHHHSCCGGGTTTTTTCHHHHHHHHHHC----CHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCcHhHHHHHcCchHHHHHHHHHhHHhcCCCHHHHHHHhcCHHHHHHhccCcccccCcHHHHHHHHH
Confidence 57778888888876421 1111 13333333 2222221 01 135788999999
Q ss_pred HHHhhhChhHHHHHHHHHh---hh------CCChhHHHHHHHHHHHHHHHh-CCC-C-------CChhhH-HHHHHhcCC
Q 000156 708 TFSEAVGPGFIFERLYKIM---KD------HKNPKVLSEGILWMVSAVEDF-GVS-H-------LKLKDL-IDFCKDTGL 768 (2015)
Q Consensus 708 ~l~e~~~~~~Vl~~L~~~l---~~------~KnpKv~~~~l~~L~~li~~f-G~~-~-------l~~k~l-i~~l~~~gL 768 (2015)
.++...+ +.+++.+++.+ +. +.+|+.+.+++..+..+.+.. |.. + +++..+ ...+... +
T Consensus 387 ~l~~~~~-~~v~~~~l~~i~~~l~~~~~~~~~~w~~reaal~algaia~~~~~~~~~~~~~~~~~~l~~~l~~~v~p~-l 464 (960)
T 1wa5_C 387 ELKEKNE-VLVTNIFLAHMKGFVDQYMSDPSKNWKFKDLYIYLFTALAINGNITNAGVSSTNNLLNVVDFFTKEIAPD-L 464 (960)
T ss_dssp HHHHHCH-HHHHHHHHHHHHHHHHHHHC----CHHHHHHHHHHHHHHHBSSCCBTTBCCCBCTTCCHHHHHHHHTHHH-H
T ss_pred HHHHHcc-hhHHHHHHHHHHHHHHHhccCcchhHHHHHHHHHHHHHHHHHhccccCCcccccccccHHHHHHHHhHHH-h
Confidence 9999887 55555555433 22 678999999999998886431 111 1 134443 3344444 6
Q ss_pred CCC---chhHHHHHHHHHHHHHHHhChhHHhhhhhccHHHHHHHHHHHhcCCCCCCCCCcccccCccccCCCCCCCCCCC
Q 000156 769 QSS---AAATRNATIKLLGALHKFVGPDIKGFLADVKPALLSALDAEYEKNPFEGTVVPKKTVRASESTSSVSSGGSDGL 845 (2015)
Q Consensus 769 ~~s---n~~VR~aA~~ll~~Ly~~~G~~l~~~L~~lkp~ll~~Le~ef~k~~~~~~p~p~R~~r~~~~~~s~~~~~~d~l 845 (2015)
.++ ++-||..|..+++.+..++.+. ++..
T Consensus 465 ~~~~~~~p~vr~~a~~~lg~~~~~~~~~---~l~~--------------------------------------------- 496 (960)
T 1wa5_C 465 TSNNIPHIILRVDAIKYIYTFRNQLTKA---QLIE--------------------------------------------- 496 (960)
T ss_dssp HCSSCSCHHHHHHHHHHHHHTGGGSCHH---HHHH---------------------------------------------
T ss_pred cCCCCCCceehHHHHHHHHHHHhhCCHH---HHHH---------------------------------------------
Confidence 666 8999999999998776543211 1111
Q ss_pred CCcccccccchHHHHhcCCCChHHHHHHHHHHHHHHHhc-----------cccCCCCChhhHHHHHHhccccc-----hH
Q 000156 846 PREDISGKFTPTLVKSLESPDWKVRLESIEAVNKILEEA-----------NKRIQPAGTGELFGGLRGRLYDS-----NK 909 (2015)
Q Consensus 846 prvdIs~~L~~~ll~~l~d~~Wk~R~eale~L~~ll~~a-----------~~~I~~~~~~eL~~~L~~rL~Ds-----N~ 909 (2015)
+.+.++..+.|.+-.+|..|...+..+++.. ...+.|. +..++..|...+... ..
T Consensus 497 --------~l~~l~~~L~d~~~~V~~~A~~Al~~~~~~~~~~~~~~~~~~~~~l~p~-l~~ll~~L~~ll~~~~~~~~~~ 567 (960)
T 1wa5_C 497 --------LMPILATFLQTDEYVVYTYAAITIEKILTIRESNTSPAFIFHKEDISNS-TEILLKNLIALILKHGSSPEKL 567 (960)
T ss_dssp --------HHHHHHHHTTCSCHHHHHHHHHHHHHHTTCBSCSSSCCBSSCGGGTTTT-HHHHHHHHHHHHHTTCCCHHHH
T ss_pred --------HHHHHHHHhCCCChhHHHHHHHHHHHHHhcccccccccccccHHHhhhh-HHHHHHHHHHHHHhccCCCCcc
Confidence 2234555666777788999999999888631 1224555 477888887777542 11
Q ss_pred HHHHHHHHHHHHHHHHhChhhHHhhhHHHHHHHHHhCC-----CcHHHHHHHHHHHHHHHHhcCc-------hhhHHHHH
Q 000156 910 NLVMATLITLGAVASAMGPAVEKSSKGVLSDILKCLGD-----NKKHMRECTLTVLDAWLAAVHL-------DKMVPYVT 977 (2015)
Q Consensus 910 ~V~~~Al~~l~~La~alg~~f~~~~~~llp~ll~~L~D-----~k~~Vr~aa~~aL~~i~~~~gl-------~~ll~~l~ 977 (2015)
.....++.+++.++..++..+.+|+..+++.++..+.. .++..+..+.+||..++...+. +.++|.+.
T Consensus 568 ~~~e~l~~al~~vv~~~~~~~~p~~~~l~~~L~~~l~~~~~~~~~~~~~~~~~e~l~~l~~~~~~~~~~~~~~~~~p~~~ 647 (960)
T 1wa5_C 568 AENEFLMRSIFRVLQTSEDSIQPLFPQLLAQFIEIVTIMAKNPSNPRFTHYTFESIGAILNYTQRQNLPLLVDSMMPTFL 647 (960)
T ss_dssp TSCHHHHHHHHHHHHHHTTTTGGGHHHHHHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHTSCGGGHHHHHHHHHHHHH
T ss_pred cccHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHH
Confidence 13357789999999999999999999999988876642 3567788899999999988552 34566666
Q ss_pred HHHhcCCCChhHHHHHHHHHHHHh
Q 000156 978 TALTDAKLGAEGRKDLFDWLSKQL 1001 (2015)
Q Consensus 978 ~~L~~~k~~p~~R~~~l~~L~~~l 1001 (2015)
..|++. ..+...+++..+...+
T Consensus 648 ~iL~~~--~~~~~~~~~~i~~~l~ 669 (960)
T 1wa5_C 648 TVFSED--IQEFIPYVFQIIAFVV 669 (960)
T ss_dssp HHHHTT--CTTTHHHHHHHHHHHH
T ss_pred HHHHhh--hHhhHHHHHHHHHHHH
Confidence 666643 2344555555554443
No 40
>2iw3_A Elongation factor 3A; acetylation, ATP-binding, protein biosynthesis, nucleotide-binding, phosphorylation, RNA- binding, rRNA-binding; HET: ADP; 2.4A {Saccharomyces cerevisiae} PDB: 2iwh_A* 2ix3_A 2ix8_A
Probab=98.75 E-value=3.9e-07 Score=123.27 Aligned_cols=295 Identities=12% Similarity=0.172 Sum_probs=215.0
Q ss_pred HHHHHHHhhcCC-ChhHHHHHHHHHHHHHhh----hhhhhHHHHHHHHhhcCChhhHHHHHHHHHHHHHHhCCCCcChhH
Q 000156 94 VCDAIAAKCLTG-RPKTVEKAQAVFMLWVEL----EAVDVFLDVMEKAIKNKVAKAVVPAIDVMFQALSEFGAKIIPPKR 168 (2015)
Q Consensus 94 v~~~LieK~l~~-k~~~k~~a~~~ll~~~E~----~~~~~v~~~L~~~~~~KnpKv~~~~l~~L~~~l~~fG~~~i~~k~ 168 (2015)
++..++.+...+ ....++.|..+...+..- ..+..+++.|.+++.+|+.- .+++..+..+.+.||... +..+
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~--~~a~~~~~~~~~~~~~~~-~~e~ 91 (986)
T 2iw3_A 15 VLEELFQKLSVATADNRHEIASEVASFLNGNIIEHDVPEHFFGELAKGIKDKKTA--ANAMQAVAHIANQSNLSP-SVEP 91 (986)
T ss_dssp HHHHHHHHHTTCCTTTHHHHHHHHHHHHTSSCSSSSCCHHHHHHHHHHHTSHHHH--HHHHHHHHHHTCTTTCCT-TTHH
T ss_pred HHHHHHhhccccchhHHHHHHHHHHHHHhccccccccchhHHHHHHHHHhccCCH--HHHHHHHHHHHHhcCCCC-Cccc
Confidence 344455553223 344444554444433311 11347889999998877544 999999999998898743 3455
Q ss_pred ----HHhhhhhhhcCCChhHHHHHHHHHHHHHHHhCCchhhHHHhhhChHHHHHHHHHHHHhcCCCCCCCccchhhhhHh
Q 000156 169 ----ILKMLPELFDHQDQNVRASSKGLTLELCRWIGKDPVKTILFEKMRDTMKKELEVELVNVSGTARPTRKIRAEQDKE 244 (2015)
Q Consensus 169 ----il~~l~~ll~~~d~~VR~~a~~l~~ely~~lG~~~l~~~l~~~Lk~~q~keLe~~f~k~~~~~~P~R~~rs~~~~~ 244 (2015)
+++.+...++|.++.||++|...+..++.-+.+.+++..|
T Consensus 92 ~~~~~~~~~~~~~~dk~~~v~~aa~~~~~~~~~~~~~~a~~~~~------------------------------------ 135 (986)
T 2iw3_A 92 YIVQLVPAICTNAGNKDKEIQSVASETLISIVNAVNPVAIKALL------------------------------------ 135 (986)
T ss_dssp HHHTTHHHHHHHTTCSSHHHHHHHHHHHHHHHHHSCGGGHHHHH------------------------------------
T ss_pred chHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHhCCHHHHHHHH------------------------------------
Confidence 4577778889999999999999988888877654331111
Q ss_pred hhhhccccCCCCCCCCCCCCCCCCCCCCCCCCCcccccccCcchhhhhhhc-cCChHHHHHHHHHHHHHhc-CCCCCCCC
Q 000156 245 LGQELISEDVGPGPSEESTADVPPEIDEYELVDPVDILTPLEKSGFWEGVK-ATKWSERKDAVAELTKLAS-TKRIAPGD 322 (2015)
Q Consensus 245 ~~~ea~~~~~~~~~~~~~~~~~~~~iD~~dl~~~vdIl~kl~~~~f~~~l~-s~kWkeR~eaL~~L~~l~~-~~ki~~~~ 322 (2015)
+.+++.+. +.||+.+..||..|..++. .|......
T Consensus 136 -------------------------------------------~~~~~~~~~~~kw~~k~~~l~~~~~~~~~~~~~~~~~ 172 (986)
T 2iw3_A 136 -------------------------------------------PHLTNAIVETNKWQEKIAILAAFSAMVDAAKDQVALR 172 (986)
T ss_dssp -------------------------------------------HHHHHHHHHCCCHHHHHHHHHHHHHHHHHSHHHHHHH
T ss_pred -------------------------------------------HHHHHHhccccchHHHHHHHHHHHHHHHHhHHHHHHh
Confidence 12333333 4589999999999999984 45444455
Q ss_pred hHHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHhhhcchhhhHhHHHHHHHHhccCcHHHHHHHHHHHHHHHHhc---C-
Q 000156 323 FTEVCRTLKKLITDVNIAVAVEAIQAIGNLARGLRTHFSGSSRFLLPVLLEKLKEKKPTVAESLTQTLQAMHKAG---C- 398 (2015)
Q Consensus 323 y~~l~~~L~k~l~D~N~~V~~~A~~~l~~La~~L~~~f~~~~~~llp~LL~klkdkk~~V~~aa~~aL~al~~~~---~- 398 (2015)
+.++++.+..++-|....|...|..++..++..+++ .-+..++|.|++.+.+... .-+|+..+.... .
T Consensus 173 ~~~~~p~~~~~~~d~k~~v~~~~~~~~~~~~~~~~n---~d~~~~~~~~~~~~~~p~~-----~~~~~~~l~~~tfv~~v 244 (986)
T 2iw3_A 173 MPELIPVLSETMWDTKKEVKAAATAAMTKATETVDN---KDIERFIPSLIQCIADPTE-----VPETVHLLGATTFVAEV 244 (986)
T ss_dssp HHHHHHHHHHHTTCSSHHHHHHHHHHHHHHGGGCCC---TTTGGGHHHHHHHHHCTTH-----HHHHHHHHTTCCCCSCC
T ss_pred ccchhcchHhhcccCcHHHHHHHHHHHHHHHhcCCC---cchhhhHHHHHHHhcChhh-----hHHHHHHhhcCeeEeee
Confidence 789999999999999999999999999999988875 3455678888888888744 446667665540 1
Q ss_pred --CChHhHHHHHHHHhhcCChHHHHHHHHHHHHHHHhc-ChhHHHHhhhhHHHHHHHHh-cCCCHHHHHHHHHHHHHHHH
Q 000156 399 --LNLVDVVEDVKTSVKNKVPLVRSLTLNWVTFCIETS-SKAAVLKVHKDYVPICMECL-NDGTPEVRDAAFSVLAAIAK 474 (2015)
Q Consensus 399 --~~l~~il~~l~~~L~~Knp~vR~~~l~~L~~~l~~~-~~~~l~~~l~~l~p~l~k~L-~Ds~~~VR~aA~~al~~l~~ 474 (2015)
.+|.-++|.|..+|..+...+|+.++-.+.++..-. ++....++++.++|.+.+.. +-++||||+.|.+|+.++.+
T Consensus 245 ~~~~l~~~~p~l~r~l~~~~~~~~r~~~~~~~n~~~lv~~~~~~~~f~~~l~p~~~~~~~~~~~pe~r~~~~~a~~~l~~ 324 (986)
T 2iw3_A 245 TPATLSIMVPLLSRGLNERETGIKRKSAVIIDNMCKLVEDPQVIAPFLGKLLPGLKSNFATIADPEAREVTLRALKTLRR 324 (986)
T ss_dssp CHHHHHHHHHHHHHHHTSSSHHHHHHHHHHHHHHHTTCCCHHHHHHHHTTTHHHHHHHTTTCCSHHHHHHHHHHHHHHHH
T ss_pred cchhHHHHHHHHHhhhccCcchhheeeEEEEcchhhhcCCHHHHhhhhhhhhhHHHHHhhccCCHHHHHHHHHHHHHHHH
Confidence 125667899999999999999999998888866544 34556678899999999976 57899999999999999988
Q ss_pred HhCc
Q 000156 475 SVGM 478 (2015)
Q Consensus 475 ~~Ge 478 (2015)
..+.
T Consensus 325 ~~~~ 328 (986)
T 2iw3_A 325 VGNV 328 (986)
T ss_dssp HHTC
T ss_pred hhcc
Confidence 7664
No 41
>2z6h_A Catenin beta-1, beta-catenin; C-terminal domain, activator, alternative splicing, cell adhesion, cytoplasm, cytoskeleton, disease mutation, nucleus; 2.20A {Homo sapiens}
Probab=98.71 E-value=5.6e-05 Score=100.89 Aligned_cols=469 Identities=13% Similarity=0.052 Sum_probs=277.6
Q ss_pred hhHhHHHHHHHHhccCcHHHHHHHHHHHHHHHHhcC-----CChHhHHHHHHHHhhcC-ChHHHHHHHHHHHHHHHhcCh
Q 000156 363 SSRFLLPVLLEKLKEKKPTVAESLTQTLQAMHKAGC-----LNLVDVVEDVKTSVKNK-VPLVRSLTLNWVTFCIETSSK 436 (2015)
Q Consensus 363 ~~~~llp~LL~klkdkk~~V~~aa~~aL~al~~~~~-----~~l~~il~~l~~~L~~K-np~vR~~~l~~L~~~l~~~~~ 436 (2015)
+....+|.|+..+++..+.|+..+..+|..+..... .....+++.++..|.+. ++.+|..++..|..+.. ...
T Consensus 11 ~~~g~i~~Lv~lL~~~~~~vr~~A~~~L~~La~~~~~~~~i~~~~~~i~~Lv~~L~~~~~~~~~~~A~~~L~~Ls~-~~~ 89 (644)
T 2z6h_A 11 LATRAIPELTKLLNDEDQVVVNKAAVMVHQLSKKEASRHAIMRSPQMVSAIVRTMQNTNDVETARCTAGTLHNLSH-HRE 89 (644)
T ss_dssp -CTTTHHHHHHHHTCSCHHHHHHHHHHHHHHHTSTTHHHHHTTCHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHTT-SHH
T ss_pred hhhchHHHHHHHHcCCCHHHHHHHHHHHHHHHCCChhHHHHHhccChHHHHHHHHhcCCCHHHHHHHHHHHHHHhc-Chh
Confidence 345578999999999999999999999999986510 11235678888888864 89999999998885432 221
Q ss_pred hHHHHh-hhhHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhCchHHHHHHHhccHHHHHHHHHHHhcCCCCCCCCCCCcc
Q 000156 437 AAVLKV-HKDYVPICMECLNDGTPEVRDAAFSVLAAIAKSVGMRPLERSIEKLDDVRRNKLSEMIAGSGGDVATGTSSAR 515 (2015)
Q Consensus 437 ~~l~~~-l~~l~p~l~k~L~Ds~~~VR~aA~~al~~l~~~~Ge~~~~~~l~~Ld~~~~kkI~e~~~~~~~~~~~~~~~~~ 515 (2015)
..... -...+|.|+.+|.+.++.||..|..+|..+.....+. . ..+.+ ..
T Consensus 90 -~~~~i~~~g~i~~Lv~lL~~~~~~v~~~A~~aL~nL~~~~~~~-~------------~~v~~---~g------------ 140 (644)
T 2z6h_A 90 -GLLAIFKSGGIPALVKMLGSPVDSVLFYAITTLHNLLLHQEGA-K------------MAVRL---AG------------ 140 (644)
T ss_dssp -HHHHHHTTTHHHHHHHHTTCSSHHHHHHHHHHHHHHHHHSTTH-H------------HHHHH---TT------------
T ss_pred -hHHHHHHcCCHHHHHHHHhCCCHHHHHHHHHHHHHHHhCcchh-H------------HHHHH---CC------------
Confidence 11111 1358899999999999999999999999888764321 1 11110 00
Q ss_pred ccCCCCCCCCCCCCcccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcCCCCCCCCCCCCCCCCCHHHHH
Q 000156 516 VQTSGGSVPSVEASESSFVRKSAASMLSGKRPVSAAPASKKGGPVKPSAKKDGSGKQETSKLTEAPEDVEPSEMSLEEIE 595 (2015)
Q Consensus 516 ~~~~~~s~~~~~~~~~~~~~~~~~s~~~~~~P~~~~~~~~k~~~~k~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~ee~e 595 (2015)
T Consensus 141 -------------------------------------------------------------------------------- 140 (644)
T 2z6h_A 141 -------------------------------------------------------------------------------- 140 (644)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHhhccCcHHHHhhhccCCHHHHHHHHHHHHHHHHhcccc------chHHHHHHHHHhcCCCCcccHHHHHHHHHHHHHH
Q 000156 596 SRLGSLIPADTVGQLKSAVWKERLEAISSLRQQVEAVQNL------DQSVEILVRLVCMLPGWSEKNVQVQQQVIEVINY 669 (2015)
Q Consensus 596 ~~~~~ll~~~l~~~L~s~~Wk~Rl~a~e~L~~~v~~~~~~------~~~~~~Lv~~L~~~pg~~DsN~qV~~~~Le~l~~ 669 (2015)
.-+.++..|.+.+|+.+..++..|..+..+.++. ....+.|+++|.. .....+...++.++..
T Consensus 141 ------~i~~Lv~lL~~~~~~~~~~a~~~L~~La~~~~~~~~~i~~~g~v~~Lv~lL~~-----~~~~~~~~~a~~~L~n 209 (644)
T 2z6h_A 141 ------GLQKMVALLNKTNVKFLAITTDCLQILAYGNQESKLIILASGGPQALVNIMRT-----YTYEKLLWTTSRVLKV 209 (644)
T ss_dssp ------HHHHHHHGGGCCCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHHHHHTT-----CCCHHHHHHHHHHHHH
T ss_pred ------ChHHHHHHHCcCCHHHHHHHHHHHHHHHhcCcHHHHHHHHcCChHHHHHHHHc-----CChHHHHHHHHHHHHH
Confidence 0023445566666766666666665544221100 0113344444421 0112223333333322
Q ss_pred HHHHcCCCchhHHHHHHHHHHhhhcchhhhHHHHHHHHHHHhhhChhHHHHHHHHHhhhCCChhHHHHHHHHHHHHHHHh
Q 000156 670 LAATATKFPKKCVVLCLLGISERVADIKTRAHAMKCLTTFSEAVGPGFIFERLYKIMKDHKNPKVLSEGILWMVSAVEDF 749 (2015)
Q Consensus 670 l~~~~~~~~~~~~~~il~~LveKlgD~K~r~~a~~~L~~l~e~~~~~~Vl~~L~~~l~~~KnpKv~~~~l~~L~~li~~f 749 (2015)
+.. +...+.. +.+. -+++.+++.+ .+.++.++..++..|.++....
T Consensus 210 Ls~----------------------~~~~~~~-------l~~~----g~l~~L~~ll-~~~~~~~~~~a~~~L~nL~~~~ 255 (644)
T 2z6h_A 210 LSV----------------------CSSNKPA-------IVEA----GGMQALGLHL-TDPSQRLVQNCLWTLRNLSDAA 255 (644)
T ss_dssp HTT----------------------CTTHHHH-------HHHT----THHHHHHTTT-TCSCHHHHHHHHHHHHHHGGGC
T ss_pred Hhc----------------------CcccHHH-------HHHC----CCHHHHHHHH-hcCCHHHHHHHHHHHHHHhhcc
Confidence 221 1111111 1110 1344455544 4557888888888888876543
Q ss_pred CCCCCChhhHHHHHHhcCCCCCchhHHHHHHHHHHHHHHHhChhHHhhhhhccHHHHHHHHHHHhcCCCCCCCCCccccc
Q 000156 750 GVSHLKLKDLIDFCKDTGLQSSAAATRNATIKLLGALHKFVGPDIKGFLADVKPALLSALDAEYEKNPFEGTVVPKKTVR 829 (2015)
Q Consensus 750 G~~~l~~k~li~~l~~~gL~~sn~~VR~aA~~ll~~Ly~~~G~~l~~~L~~lkp~ll~~Le~ef~k~~~~~~p~p~R~~r 829 (2015)
. .......+++.+..+ +.+.++.||..|..+|..|... ++.....+ .+ . +
T Consensus 256 ~-~~~~~~~~i~~Lv~l-L~~~d~~v~~~a~~aL~~L~~~-~~~~~~~v-----------~~----~---g--------- 305 (644)
T 2z6h_A 256 T-KQEGMEGLLGTLVQL-LGSDDINVVTCAAGILSNLTCN-NYKNKMMV-----------CQ----V---G--------- 305 (644)
T ss_dssp T-TCCSCHHHHHHHHHH-TTCSCHHHHHHHHHHHHHHHTT-CHHHHHHH-----------HH----T---T---------
T ss_pred h-hhhhhhhHHHHHHHH-HcCCCHHHHHHHHHHHHHHHcC-CHHHHHHH-----------HH----c---C---------
Confidence 2 222346788888888 9999999999999999888542 11111111 00 0 0
Q ss_pred CccccCCCCCCCCCCCCCcccccccchHHHHhcCC--CChHHHHHHHHHHHHHHHhccc--cCCCCC-hhhHHHHHHhcc
Q 000156 830 ASESTSSVSSGGSDGLPREDISGKFTPTLVKSLES--PDWKVRLESIEAVNKILEEANK--RIQPAG-TGELFGGLRGRL 904 (2015)
Q Consensus 830 ~~~~~~s~~~~~~d~lprvdIs~~L~~~ll~~l~d--~~Wk~R~eale~L~~ll~~a~~--~I~~~~-~~eL~~~L~~rL 904 (2015)
..+.++..+.+ ..+.+|..|+..|..+...... ..+... ....++.|...|
T Consensus 306 ------------------------~v~~Lv~lL~~~~~~~~v~~~a~~aL~nL~~~~~~~~~~q~~v~~~~~l~~L~~lL 361 (644)
T 2z6h_A 306 ------------------------GIEALVRTVLRAGDREDITEPAICALRHLTSRHQEAEMAQNAVRLHYGLPVVVKLL 361 (644)
T ss_dssp ------------------------HHHHHHHHHHHHTTCHHHHHHHHHHHHHHTSSSTTHHHHHHHHHHTTHHHHHHHTT
T ss_pred ------------------------CHHHHHHHHHccCCcHHHHHHHHHHHHHHhcCCchHHHHHHHHHHccChHHHHHHh
Confidence 11234444433 2378888888888887531000 000000 124577888888
Q ss_pred ccch-HHHHHHHHHHHHHHHHHhChhhHHh--hhHHHHHHHHHhCCC----------------------cHHHHHHHHHH
Q 000156 905 YDSN-KNLVMATLITLGAVASAMGPAVEKS--SKGVLSDILKCLGDN----------------------KKHMRECTLTV 959 (2015)
Q Consensus 905 ~DsN-~~V~~~Al~~l~~La~alg~~f~~~--~~~llp~ll~~L~D~----------------------k~~Vr~aa~~a 959 (2015)
.+.+ ..++..|+.+++.|+.. ...... -..++|.++..|.+. ...|+.++..+
T Consensus 362 ~~~~~~~v~~~a~~~L~nLa~~--~~~~~~i~~~~~i~~Lv~lL~~~~~~vr~~a~~al~n~~~~~~~~~~~v~~~a~~a 439 (644)
T 2z6h_A 362 HPPSHWPLIKATVGLIRNLALC--PANHAPLREQGAIPRLVQLLVRAHQDTQRRTSMGGTQQQFVEGVRMEEIVEGCTGA 439 (644)
T ss_dssp STTCCHHHHHHHHHHHHHHTTS--GGGHHHHHHTTHHHHHHHHHHHHHHHHTTC----------CCSSCHHHHHHHHHHH
T ss_pred CccCchHHHHHHHHHHHHHccC--HHHHHHHHHcCCHHHHHHHHhccchhhhhHhhhccccchhcccccHHHHHHHHHHH
Confidence 7764 68999999999988742 222111 234778887777653 34567777777
Q ss_pred HHHHHHhc------CchhhHHHHHHHHhcCCCChhHHHHHHHHHHHHhccCCCCC-Ch--hhhHHHHHhhcCCCChHHHH
Q 000156 960 LDAWLAAV------HLDKMVPYVTTALTDAKLGAEGRKDLFDWLSKQLTGLSGFP-DA--AHLLKPASIAMTDKSSDVRK 1030 (2015)
Q Consensus 960 L~~i~~~~------gl~~ll~~l~~~L~~~k~~p~~R~~~l~~L~~~l~~~~~~~-~~--~~ll~pl~~~L~D~~~~VR~ 1030 (2015)
|..++... .-...++.+...|.+. ++.++..++..|..... ..... .+ ...+.+|..++.|.+++||.
T Consensus 440 L~~La~~~~~~~~l~~~~~i~~Lv~lL~~~--~~~v~~~a~~aL~~l~~-~~~~~~~i~~~g~l~~L~~ll~~~~~~vr~ 516 (644)
T 2z6h_A 440 LHILARDVHNRIVIRGLNTIPLFVQLLYSP--IENIQRVAAGVLCELAQ-DKEAAEAIEAEGATAPLTELLHSRNEGVAT 516 (644)
T ss_dssp HHHHTTSHHHHHHHHHTTCHHHHHHHTTCS--CHHHHHHHHHHHHHHHT-SHHHHHHHHHTTCHHHHHHHTTCSCHHHHH
T ss_pred HHHHhcCHHHHHHHHhCCcHHHHHHHHcCC--CHHHHHHHHHHHHHHHc-CHHHHHHHHHcCChhHHHHHHcCCCHHHHH
Confidence 77554321 1134577788888765 47788887777665432 11000 01 12355688889999999999
Q ss_pred HHHHHHHHHHHHcCh
Q 000156 1031 AAEACIVEILRAGGQ 1045 (2015)
Q Consensus 1031 aA~~~L~~l~~~~G~ 1045 (2015)
+|..+|..+...-+.
T Consensus 517 ~A~~aL~~l~~~~~~ 531 (644)
T 2z6h_A 517 YAAAVLFRMSEDKPQ 531 (644)
T ss_dssp HHHHHHHHHTTTSCH
T ss_pred HHHHHHHHHhccCcH
Confidence 999999887665543
No 42
>2z6h_A Catenin beta-1, beta-catenin; C-terminal domain, activator, alternative splicing, cell adhesion, cytoplasm, cytoskeleton, disease mutation, nucleus; 2.20A {Homo sapiens}
Probab=98.69 E-value=1.1e-05 Score=107.89 Aligned_cols=487 Identities=13% Similarity=0.060 Sum_probs=284.2
Q ss_pred HHHHHHHhcccCHHHHHHHHHHHHHHHHHhhhcchhh-hHhHHHHHHHHhccC-cHHHHHHHHHHHHHHHHhc--C--CC
Q 000156 327 CRTLKKLITDVNIAVAVEAIQAIGNLARGLRTHFSGS-SRFLLPVLLEKLKEK-KPTVAESLTQTLQAMHKAG--C--LN 400 (2015)
Q Consensus 327 ~~~L~k~l~D~N~~V~~~A~~~l~~La~~L~~~f~~~-~~~llp~LL~klkdk-k~~V~~aa~~aL~al~~~~--~--~~ 400 (2015)
++.|.+.+.+.+..++..|+.+|+.|+..-.....-. ...+++.|++.+.+. ...++..+..+|..+.... . ..
T Consensus 16 i~~Lv~lL~~~~~~vr~~A~~~L~~La~~~~~~~~i~~~~~~i~~Lv~~L~~~~~~~~~~~A~~~L~~Ls~~~~~~~~i~ 95 (644)
T 2z6h_A 16 IPELTKLLNDEDQVVVNKAAVMVHQLSKKEASRHAIMRSPQMVSAIVRTMQNTNDVETARCTAGTLHNLSHHREGLLAIF 95 (644)
T ss_dssp HHHHHHHHTCSCHHHHHHHHHHHHHHHTSTTHHHHHTTCHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHTTSHHHHHHHH
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHCCChhHHHHHhccChHHHHHHHHhcCCCHHHHHHHHHHHHHHhcChhhHHHHH
Confidence 4555566778899999999999999997543221111 236789999999865 7888888888888765320 0 00
Q ss_pred hHhHHHHHHHHhhcCChHHHHHHHHHHHHHHHhcChhHHHHh-hhhHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhCch
Q 000156 401 LVDVVEDVKTSVKNKVPLVRSLTLNWVTFCIETSSKAAVLKV-HKDYVPICMECLNDGTPEVRDAAFSVLAAIAKSVGMR 479 (2015)
Q Consensus 401 l~~il~~l~~~L~~Knp~vR~~~l~~L~~~l~~~~~~~l~~~-l~~l~p~l~k~L~Ds~~~VR~aA~~al~~l~~~~Ge~ 479 (2015)
-...++.+...+++.++.++..++..|..+....... .... -...+|.|+++|.+.++.++.++..+|..+.. +..
T Consensus 96 ~~g~i~~Lv~lL~~~~~~v~~~A~~aL~nL~~~~~~~-~~~v~~~g~i~~Lv~lL~~~~~~~~~~a~~~L~~La~--~~~ 172 (644)
T 2z6h_A 96 KSGGIPALVKMLGSPVDSVLFYAITTLHNLLLHQEGA-KMAVRLAGGLQKMVALLNKTNVKFLAITTDCLQILAY--GNQ 172 (644)
T ss_dssp TTTHHHHHHHHTTCSSHHHHHHHHHHHHHHHHHSTTH-HHHHHHTTHHHHHHHGGGCCCHHHHHHHHHHHHHHHT--TCH
T ss_pred HcCCHHHHHHHHhCCCHHHHHHHHHHHHHHHhCcchh-HHHHHHCCChHHHHHHHCcCCHHHHHHHHHHHHHHHh--cCc
Confidence 0246788889999999999999999999887654322 1111 25689999999999999999999999987764 322
Q ss_pred HHHHHHHhccHHHHHHHHHHHhcCCCCCCCCCCCccccCCCCCCCCCCCCcccccccccccccCCCCCCCCCCCCCCCCC
Q 000156 480 PLERSIEKLDDVRRNKLSEMIAGSGGDVATGTSSARVQTSGGSVPSVEASESSFVRKSAASMLSGKRPVSAAPASKKGGP 559 (2015)
Q Consensus 480 ~~~~~l~~Ld~~~~kkI~e~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~s~~~~~~P~~~~~~~~k~~~ 559 (2015)
.....+-.... ...+.+.+...
T Consensus 173 ~~~~~i~~~g~--v~~Lv~lL~~~-------------------------------------------------------- 194 (644)
T 2z6h_A 173 ESKLIILASGG--PQALVNIMRTY-------------------------------------------------------- 194 (644)
T ss_dssp HHHHHHHHTTH--HHHHHHHHTTC--------------------------------------------------------
T ss_pred HHHHHHHHcCC--hHHHHHHHHcC--------------------------------------------------------
Confidence 11111110000 00111111000
Q ss_pred CCCCCCCCCCCCCcCCCCCCCCCCCCCCCCCHHHHHHHhhccCcHHHHhhhccCCHHHHHHHHHHHHHHHHhccccchHH
Q 000156 560 VKPSAKKDGSGKQETSKLTEAPEDVEPSEMSLEEIESRLGSLIPADTVGQLKSAVWKERLEAISSLRQQVEAVQNLDQSV 639 (2015)
Q Consensus 560 ~k~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~ee~e~~~~~ll~~~l~~~L~s~~Wk~Rl~a~e~L~~~v~~~~~~~~~~ 639 (2015)
+.+++...+ ..++..|... -..|.. ++.. ...
T Consensus 195 ------------------------------~~~~~~~~a-----~~~L~nLs~~-~~~~~~-------l~~~-----g~l 226 (644)
T 2z6h_A 195 ------------------------------TYEKLLWTT-----SRVLKVLSVC-SSNKPA-------IVEA-----GGM 226 (644)
T ss_dssp ------------------------------CCHHHHHHH-----HHHHHHHTTC-TTHHHH-------HHHT-----THH
T ss_pred ------------------------------ChHHHHHHH-----HHHHHHHhcC-cccHHH-------HHHC-----CCH
Confidence 001110000 0111112110 011100 0000 012
Q ss_pred HHHHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHhhhcc--hhhhHHHHHHHHHHHhhhCh--
Q 000156 640 EILVRLVCMLPGWSEKNVQVQQQVIEVINYLAATATKFPKKCVVLCLLGISERVAD--IKTRAHAMKCLTTFSEAVGP-- 715 (2015)
Q Consensus 640 ~~Lv~~L~~~pg~~DsN~qV~~~~Le~l~~l~~~~~~~~~~~~~~il~~LveKlgD--~K~r~~a~~~L~~l~e~~~~-- 715 (2015)
+.|+.+ +.+.+..++..++.+|..+....+.. .....+++.|+.-+.+ ..++..|..+|..++.....
T Consensus 227 ~~L~~l------l~~~~~~~~~~a~~~L~nL~~~~~~~--~~~~~~i~~Lv~lL~~~d~~v~~~a~~aL~~L~~~~~~~~ 298 (644)
T 2z6h_A 227 QALGLH------LTDPSQRLVQNCLWTLRNLSDAATKQ--EGMEGLLGTLVQLLGSDDINVVTCAAGILSNLTCNNYKNK 298 (644)
T ss_dssp HHHHTT------TTCSCHHHHHHHHHHHHHHGGGCTTC--CSCHHHHHHHHHHTTCSCHHHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHH------HhcCCHHHHHHHHHHHHHHhhcchhh--hhhhhHHHHHHHHHcCCCHHHHHHHHHHHHHHHcCCHHHH
Confidence 223332 34556778888888888887643322 1234567777776654 56888888888888763211
Q ss_pred -----hHHHHHHHHHhhhCC-ChhHHHHHHHHHHHHHHHhCCCC-----CChhhHHHHHHhcCCCCCc-hhHHHHHHHHH
Q 000156 716 -----GFIFERLYKIMKDHK-NPKVLSEGILWMVSAVEDFGVSH-----LKLKDLIDFCKDTGLQSSA-AATRNATIKLL 783 (2015)
Q Consensus 716 -----~~Vl~~L~~~l~~~K-npKv~~~~l~~L~~li~~fG~~~-----l~~k~li~~l~~~gL~~sn-~~VR~aA~~ll 783 (2015)
.-+++.|+..+.... .+.++..++..|..+....+... +--...++.+..+ |.+.+ +.||.+|..++
T Consensus 299 ~~v~~~g~v~~Lv~lL~~~~~~~~v~~~a~~aL~nL~~~~~~~~~~q~~v~~~~~l~~L~~l-L~~~~~~~v~~~a~~~L 377 (644)
T 2z6h_A 299 MMVCQVGGIEALVRTVLRAGDREDITEPAICALRHLTSRHQEAEMAQNAVRLHYGLPVVVKL-LHPPSHWPLIKATVGLI 377 (644)
T ss_dssp HHHHHTTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTSSSTTHHHHHHHHHHTTHHHHHHHT-TSTTCCHHHHHHHHHHH
T ss_pred HHHHHcCCHHHHHHHHHccCCcHHHHHHHHHHHHHHhcCCchHHHHHHHHHHccChHHHHHH-hCccCchHHHHHHHHHH
Confidence 114566666654333 48999999999888853222100 0001356677777 88775 79999999999
Q ss_pred HHHHHHhChhHHhhh--hhccHHHHHHHHHHHhcCCCCCCCCCcccccCccccCCCCCCCCCCCCCcccccccchHHHHh
Q 000156 784 GALHKFVGPDIKGFL--ADVKPALLSALDAEYEKNPFEGTVVPKKTVRASESTSSVSSGGSDGLPREDISGKFTPTLVKS 861 (2015)
Q Consensus 784 ~~Ly~~~G~~l~~~L--~~lkp~ll~~Le~ef~k~~~~~~p~p~R~~r~~~~~~s~~~~~~d~lprvdIs~~L~~~ll~~ 861 (2015)
..|.. ++.....+ .+.-|.+.+.+......++.+..-+ . ..+ ++..
T Consensus 378 ~nLa~--~~~~~~~i~~~~~i~~Lv~lL~~~~~~vr~~a~~a----------l------~n~-----~~~~--------- 425 (644)
T 2z6h_A 378 RNLAL--CPANHAPLREQGAIPRLVQLLVRAHQDTQRRTSMG----------G------TQQ-----QFVE--------- 425 (644)
T ss_dssp HHHTT--SGGGHHHHHHTTHHHHHHHHHHHHHHHHTTC-------------------------------CC---------
T ss_pred HHHcc--CHHHHHHHHHcCCHHHHHHHHhccchhhhhHhhhc----------c------ccc-----hhcc---------
Confidence 88864 33322222 4566777777766544433211000 0 000 0000
Q ss_pred cCCCChHHHHHHHHHHHHHHHhccccCCCCC-hhhHHHHHHhccccchHHHHHHHHHHHHHHHHHhChhhHHhhh--HHH
Q 000156 862 LESPDWKVRLESIEAVNKILEEANKRIQPAG-TGELFGGLRGRLYDSNKNLVMATLITLGAVASAMGPAVEKSSK--GVL 938 (2015)
Q Consensus 862 l~d~~Wk~R~eale~L~~ll~~a~~~I~~~~-~~eL~~~L~~rL~DsN~~V~~~Al~~l~~La~alg~~f~~~~~--~ll 938 (2015)
+..+..++..++..|..+.... ...... -...++.|...|.+.+..|+..|+.++..++.. ++....+. ..+
T Consensus 426 -~~~~~~v~~~a~~aL~~La~~~--~~~~~l~~~~~i~~Lv~lL~~~~~~v~~~a~~aL~~l~~~--~~~~~~i~~~g~l 500 (644)
T 2z6h_A 426 -GVRMEEIVEGCTGALHILARDV--HNRIVIRGLNTIPLFVQLLYSPIENIQRVAAGVLCELAQD--KEAAEAIEAEGAT 500 (644)
T ss_dssp -SSCHHHHHHHHHHHHHHHTTSH--HHHHHHHHTTCHHHHHHHTTCSCHHHHHHHHHHHHHHHTS--HHHHHHHHHTTCH
T ss_pred -cccHHHHHHHHHHHHHHHhcCH--HHHHHHHhCCcHHHHHHHHcCCCHHHHHHHHHHHHHHHcC--HHHHHHHHHcCCh
Confidence 0112345566666776554311 000000 134678888889999999999999999888732 33333222 246
Q ss_pred HHHHHHhCCCcHHHHHHHHHHHHHHHHhcC
Q 000156 939 SDILKCLGDNKKHMRECTLTVLDAWLAAVH 968 (2015)
Q Consensus 939 p~ll~~L~D~k~~Vr~aa~~aL~~i~~~~g 968 (2015)
+.+...+.+.++.||..|..+|..+....+
T Consensus 501 ~~L~~ll~~~~~~vr~~A~~aL~~l~~~~~ 530 (644)
T 2z6h_A 501 APLTELLHSRNEGVATYAAAVLFRMSEDKP 530 (644)
T ss_dssp HHHHHHTTCSCHHHHHHHHHHHHHHTTTSC
T ss_pred hHHHHHHcCCCHHHHHHHHHHHHHHhccCc
Confidence 788899999999999999999988766543
No 43
>3now_A UNC-45 protein, SD10334P; armadillo repeat, HSP90, myosin, tetra-tricopeptide repeat, binding protein required for myosin function; 2.99A {Drosophila melanogaster}
Probab=98.67 E-value=4.8e-05 Score=101.91 Aligned_cols=609 Identities=14% Similarity=0.117 Sum_probs=361.1
Q ss_pred ccCChHHHHHHHHHHHHHhcC----CCCCCCChHHHHHHHHHHhcc-cCHHHHHHHHHHHHHHHHHhhhcchhh-hHhHH
Q 000156 295 KATKWSERKDAVAELTKLAST----KRIAPGDFTEVCRTLKKLITD-VNIAVAVEAIQAIGNLARGLRTHFSGS-SRFLL 368 (2015)
Q Consensus 295 ~s~kWkeR~eaL~~L~~l~~~----~ki~~~~y~~l~~~L~k~l~D-~N~~V~~~A~~~l~~La~~L~~~f~~~-~~~ll 368 (2015)
.+.+-..|..|+..|.-|+.. .+|...+ -+..|.+.+.+ .|.-++..|++++..|+++=+...... -..=+
T Consensus 18 ~~~~~~~~~~a~~nl~vl~re~aga~~i~~~~---~~~~~~~l~~~~~~~~~~~~~~r~~~~~~~~~~~r~~~~~~~~~~ 94 (810)
T 3now_A 18 LATPIDKRRAAANNLVVLAKEQTGAELLYKDH---CIAKVASLTKVEKDQDIYVNMVHLVAALCENSVERTKGVLTELGV 94 (810)
T ss_dssp SCCSSHHHHHHHHHHHHHSSCHHHHHHHHHTT---HHHHHHHHHHHCCCHHHHHHHHHHHHHHHTTCHHHHHHHHHHSCH
T ss_pred cccCHHHHHHHHhhceeeeccccchHHHHhCc---hHHHHHHHHhccCchhHHHHHHHHHHHHHhccHHHHHHHHHHcCH
Confidence 455666777888888777631 2222221 24456666664 889999999999999998654332222 22335
Q ss_pred HHHHHHhccCcHHHHHHHHHHHHHHHHh--cCC-----------------ChHhHHHHHHHHhhcCC--hHHHHHHHHHH
Q 000156 369 PVLLEKLKEKKPTVAESLTQTLQAMHKA--GCL-----------------NLVDVVEDVKTSVKNKV--PLVRSLTLNWV 427 (2015)
Q Consensus 369 p~LL~klkdkk~~V~~aa~~aL~al~~~--~~~-----------------~l~~il~~l~~~L~~Kn--p~vR~~~l~~L 427 (2015)
|.++..+..+...+..++..++..++.. +.. .++.++..++..+.+++ ...|-.+++.|
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~ 174 (810)
T 3now_A 95 PWFMRVLDQKHENCVSTAQFCLQTILNALSGLKNKPDSKPDKELCTRNNREIDTLLTCLVYSITDRTISGAARDGVIELI 174 (810)
T ss_dssp HHHHHHHHCCSTTHHHHHHHHHHHHHHHHHTCCSSTTCCCCHHHHHHTHHHHHHHHHHHHHHHTCTTSCHHHHHHHHHHH
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHHHHHhccccccccCCcHHHHhhhhhHHHHHHHHHHHHhhccccChhhHHHHHHHH
Confidence 6777777788888899999999888866 110 13344555666666655 79999999999
Q ss_pred HHHHHhcChh---HH-H-HhhhhHHHHHHHHhcCC--------CHHHHHHHHHHHHHHHHHhCchH-HHHHHHhccHHHH
Q 000156 428 TFCIETSSKA---AV-L-KVHKDYVPICMECLNDG--------TPEVRDAAFSVLAAIAKSVGMRP-LERSIEKLDDVRR 493 (2015)
Q Consensus 428 ~~~l~~~~~~---~l-~-~~l~~l~p~l~k~L~Ds--------~~~VR~aA~~al~~l~~~~Ge~~-~~~~l~~Ld~~~~ 493 (2015)
.+-+.+.... .+ . ..++.++.+... +.+. .+++|..|.-|+..++.-.+.+. -+.|-
T Consensus 175 ~~~~~~~~~~~~~~~~~~~g~~~~l~v~~~-~~~~~~~~~~~~~~~~r~~~~~~l~~~~~~~~~~~~~~~~~-------- 245 (810)
T 3now_A 175 TRNVHYTALEWAERLVEIRGLCRLLDVCSE-LEDYKYESAMDITGSSSTIASVCLARIYENMYYDEAKARFT-------- 245 (810)
T ss_dssp HHHTTCTTTTHHHHHHHTTHHHHHHHHHTC-CSSSCCSSCCCCCTTHHHHHHHHHHHHHHTCCSHHHHHHHH--------
T ss_pred HHhCCccccccccchhhHhhHHHHHHHHhc-CccccccccCCCChhHHHHHHHHHHHHHHHhccchhHHHHH--------
Confidence 8887554311 11 1 133444433222 2332 67899999999999999888432 12222
Q ss_pred HHHHHHHhcCCCCCCCCCCCccccCCCCCCCCCCCCccccccc-cccc-ccCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q 000156 494 NKLSEMIAGSGGDVATGTSSARVQTSGGSVPSVEASESSFVRK-SAAS-MLSGKRPVSAAPASKKGGPVKPSAKKDGSGK 571 (2015)
Q Consensus 494 kkI~e~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~-~~~s-~~~~~~P~~~~~~~~k~~~~k~~~~~~~~~~ 571 (2015)
+.+.+++...-. .+. . . ..++. ++-+ .++ |
T Consensus 246 ~~~~~~~~~~~~-----~~~------------~---~-~~~~a~~alt~i~~-------------------g-------- 277 (810)
T 3now_A 246 DQIDEYIKDKLL-----APD------------M---E-SKVRVTVAITALLN-------------------G-------- 277 (810)
T ss_dssp HHHHHHHHHHHS-----SCC------------H---H-HHHHHHHHHHHHHS-------------------S--------
T ss_pred HHHHHHHHHHhc-----cCC------------h---H-hHHHHHHHHHHHhc-------------------C--------
Confidence 222333321000 000 0 0 00000 0000 000 0
Q ss_pred CcCCCCCCCCCCCCCCCCCHHHHHHHh-hccCcHHHHhhhccCCHHHHHHHHHHHHHHHHhccccchHHHHHHHHHhcCC
Q 000156 572 QETSKLTEAPEDVEPSEMSLEEIESRL-GSLIPADTVGQLKSAVWKERLEAISSLRQQVEAVQNLDQSVEILVRLVCMLP 650 (2015)
Q Consensus 572 ~~~s~~~~~~~~~~~~~~s~ee~e~~~-~~ll~~~l~~~L~s~~Wk~Rl~a~e~L~~~v~~~~~~~~~~~~Lv~~L~~~p 650 (2015)
.++...... .+-+-+.++..+.|.+-..+..|++.+..........+...+.-+.+|..
T Consensus 278 ------------------~~~~~~~~~~~~G~v~~li~Ll~s~~~~~q~~A~~al~~aa~~~~~R~~I~~~gv~~L~~-- 337 (810)
T 3now_A 278 ------------------PLDVGNQVVAREGILQMILAMATTDDELQQRVACECLIAASSKKDKAKALCEQGVDILKR-- 337 (810)
T ss_dssp ------------------SHHHHHHHHHTTTHHHHHHHHHHSSCHHHHHHHHHHHHHHTTSHHHHHTTHHHHHHHHHH--
T ss_pred ------------------CHHHHHHHHhccchHHHHHHHhCCCCHHHHHHHHHHHHHHcCCcHHHHHHHHcCcHHHHH--
Confidence 011111111 11223678899999999999999999987654321111001111133321
Q ss_pred CCcccHHHHHHHHHHHHHHHHHHc------CCCchhHHHHHHHHHHhhhcc----hhhhHHHHHHHHHHHhhhC------
Q 000156 651 GWSEKNVQVQQQVIEVINYLAATA------TKFPKKCVVLCLLGISERVAD----IKTRAHAMKCLTTFSEAVG------ 714 (2015)
Q Consensus 651 g~~DsN~qV~~~~Le~l~~l~~~~------~~~~~~~~~~il~~LveKlgD----~K~r~~a~~~L~~l~e~~~------ 714 (2015)
.++..+..++..++-.|..+.... ..|....+..+++.++.-+.+ ..++..|.++|..++....
T Consensus 338 Ll~s~~~~vr~~Al~~L~kl~s~~~~d~~~~~~~~g~i~~Lv~~l~~lL~~~~~d~~v~~~AveaLayLS~~~~vk~~lv 417 (810)
T 3now_A 338 LYHSKNDGIRVRALVGLCKLGSYGGQDAAIRPFGDGAALKLAEACRRFLIKPGKDKDIRRWAADGLAYLTLDAECKEKLI 417 (810)
T ss_dssp HTTCSCHHHHHHHHHHHHHHHTTTTTTTSCCSSTTTHHHHHHHHHHHHHHCSSCCSSHHHHHHHHHHHHTTSHHHHHHHH
T ss_pred HHcCCCHHHHHHHHHHHHHhccccccCccccchhhccHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHhCCcHHHHHHH
Confidence 134445566677777777776321 223333455666666665554 4578888888888764221
Q ss_pred -hhHHHHHHHHHhhhCCChhHHHHHHHHHHHHHHHhCCC---------------CC------C----hh---------hH
Q 000156 715 -PGFIFERLYKIMKDHKNPKVLSEGILWMVSAVEDFGVS---------------HL------K----LK---------DL 759 (2015)
Q Consensus 715 -~~~Vl~~L~~~l~~~KnpKv~~~~l~~L~~li~~fG~~---------------~l------~----~k---------~l 759 (2015)
-.-+++.|+..+ .+.++.++.+++..|.++....-.. .+ + ++ ..
T Consensus 418 ~d~g~Ip~LV~LL-~s~d~~i~~~al~~L~NLt~~~d~q~~~~~l~~la~~s~~~v~~~~~ld~~~~v~~r~~~VveaGa 496 (810)
T 3now_A 418 EDKASIHALMDLA-RGGNQSCLYGVVTTFVNLCNAYEKQEMLPEMIELAKFAKQHIPEEHELDDVDFINKRITVLANEGI 496 (810)
T ss_dssp HCHHHHHHHHHHH-HTTCGGGHHHHHHHHHHHTTCSCCCCCCCSCGGGTTTTCCSCCCSSCHHHHHHHHHHHHHHHHTTH
T ss_pred HccchHHHHHHHh-CCCChHHHHHHHHHHHHHcCCchhhhhhHHHHHHHHHhhccCccccccccHHHHHHHHHHHHHCcC
Confidence 112456666665 5678999999999999998743100 00 0 11 24
Q ss_pred HHHHHhcCCCCCchhHHHHHHHHHHHHHHHhChhHHhhhhhccHHHHHHHHHHHhcCCCCCCCCCcccccCccccCCCCC
Q 000156 760 IDFCKDTGLQSSAAATRNATIKLLGALHKFVGPDIKGFLADVKPALLSALDAEYEKNPFEGTVVPKKTVRASESTSSVSS 839 (2015)
Q Consensus 760 i~~l~~~gL~~sn~~VR~aA~~ll~~Ly~~~G~~l~~~L~~lkp~ll~~Le~ef~k~~~~~~p~p~R~~r~~~~~~s~~~ 839 (2015)
++.+..+ +.+.++.||..|..+|..|.. .+..+..+ -+ .+
T Consensus 497 Vp~LV~L-L~s~s~~vqe~Aa~aL~NLA~--d~~~r~~V-----------v~-------~G------------------- 536 (810)
T 3now_A 497 TTALCAL-AKTESHNSQELIARVLNAVCG--LKELRGKV-----------VQ-------EG------------------- 536 (810)
T ss_dssp HHHHHHH-HTCCCHHHHHHHHHHHHHHHT--SHHHHHHH-----------HH-------TT-------------------
T ss_pred HHHHHHH-HcCCCHHHHHHHHHHHHHHcC--CHHHHHHH-----------HH-------CC-------------------
Confidence 5666666 888899999999998887742 11122111 10 00
Q ss_pred CCCCCCCCcccccccchHHHHhcCCCChHHHHHHHHHHHHHHHhccccCC-CC-ChhhHHHHHHhccc-cchHHHHHHHH
Q 000156 840 GGSDGLPREDISGKFTPTLVKSLESPDWKVRLESIEAVNKILEEANKRIQ-PA-GTGELFGGLRGRLY-DSNKNLVMATL 916 (2015)
Q Consensus 840 ~~~d~lprvdIs~~L~~~ll~~l~d~~Wk~R~eale~L~~ll~~a~~~I~-~~-~~~eL~~~L~~rL~-DsN~~V~~~Al 916 (2015)
..+.|+..+.+...+.|..|...|..++...++.+. .. ...+.++.|...|. |.+...+..|+
T Consensus 537 --------------aip~Lv~LL~s~~~~~k~~Aa~AL~nL~~~~~p~~~~~~~~~~~aIppLv~LL~~~~~~l~~~eAl 602 (810)
T 3now_A 537 --------------GVKALLRMALEGTEKGKRHATQALARIGITINPEVSFSGQRSLDVIRPLLNLLQQDCTALENFESL 602 (810)
T ss_dssp --------------HHHHHHHHHHSSCHHHHHHHHHHHHHHHHHSCHHHHTTTHHHHHTHHHHHHTTSTTSCHHHHHHHH
T ss_pred --------------CHHHHHHHHccCCHHHHHHHHHHHHHHhcCCChhhhhcchhhhcHHHHHHHHhCCCCcHHHHHHHH
Confidence 123455666666677899999999999875433221 11 11346788888885 33444456788
Q ss_pred HHHHHHHHHhChhhH-Hhh-hHHHHHHHHHhCCCcHHHHHHHHHHHHHHHHhcC-------chhhHHHHHHHHhcCCCCh
Q 000156 917 ITLGAVASAMGPAVE-KSS-KGVLSDILKCLGDNKKHMRECTLTVLDAWLAAVH-------LDKMVPYVTTALTDAKLGA 987 (2015)
Q Consensus 917 ~~l~~La~alg~~f~-~~~-~~llp~ll~~L~D~k~~Vr~aa~~aL~~i~~~~g-------l~~ll~~l~~~L~~~k~~p 987 (2015)
.+|..|+..- .+.. ..+ ...+|.++..+.+.+..|+.+|..+|..++..-. -...++.+...+.+. +.
T Consensus 603 ~AL~NLa~~~-d~~~~~Ii~aG~l~~Lv~LL~s~~~~Vq~~A~~~L~NLa~~~~~~~~~v~~~g~l~~Lv~LL~s~--d~ 679 (810)
T 3now_A 603 MALTNLASMN-ESVRQRIIKEQGVSKIEYYLMEDHLYLTRAAAQCLCNLVMSEDVIKMFEGNNDRVKFLALLCEDE--DE 679 (810)
T ss_dssp HHHHHHTTSC-HHHHHHHHHTTHHHHHHHHHHSCCTTHHHHHHHHHHHHTTSHHHHHHHHSSSSHHHHHHHGGGCS--SH
T ss_pred HHHHHHhcCC-HHHHHHHHHcCCHHHHHHHHcCCCHHHHHHHHHHHHHHhCChHHHHHHHhccCcHHHHHHHhcCC--CH
Confidence 8888888542 1222 222 2468999999999999999999999998874311 124567777777765 46
Q ss_pred hHHHHHHHHHHHHhccCCC-CCCh---hhhHHHHHhhcCCCChHHHHHHHHHHHHHHH
Q 000156 988 EGRKDLFDWLSKQLTGLSG-FPDA---AHLLKPASIAMTDKSSDVRKAAEACIVEILR 1041 (2015)
Q Consensus 988 ~~R~~~l~~L~~~l~~~~~-~~~~---~~ll~pl~~~L~D~~~~VR~aA~~~L~~l~~ 1041 (2015)
.+|.+++..|+-.-..... ...+ ...+++|+..|.+.+.+||+.|..++..+..
T Consensus 680 ~vq~~Aa~ALanLt~~s~~~~~~ii~~~g~I~~Lv~LL~s~d~~vq~~A~~aL~NL~~ 737 (810)
T 3now_A 680 ETATACAGALAIITSVSVKCCEKILAIASWLDILHTLIANPSPAVQHRGIVIILNMIN 737 (810)
T ss_dssp HHHHHHHHHHHHHHHHCHHHHHHHHTSTTHHHHHHHHHTCSSHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHhCCCHHHHHHHHHHcCCHHHHHHHHCCCCHHHHHHHHHHHHHHHh
Confidence 7888877666543321221 0111 3467789999999999999999999988765
No 44
>3now_A UNC-45 protein, SD10334P; armadillo repeat, HSP90, myosin, tetra-tricopeptide repeat, binding protein required for myosin function; 2.99A {Drosophila melanogaster}
Probab=98.64 E-value=7.2e-05 Score=100.21 Aligned_cols=670 Identities=12% Similarity=0.079 Sum_probs=359.4
Q ss_pred hhHHHHHHHHHHHHH-hhhhhhhH-----HHHHHHHhhc-CChhhHHHHHHHHHHHHHHhCCCCcC-hhHH-Hhhhhhhh
Q 000156 107 PKTVEKAQAVFMLWV-ELEAVDVF-----LDVMEKAIKN-KVAKAVVPAIDVMFQALSEFGAKIIP-PKRI-LKMLPELF 177 (2015)
Q Consensus 107 ~~~k~~a~~~ll~~~-E~~~~~~v-----~~~L~~~~~~-KnpKv~~~~l~~L~~~l~~fG~~~i~-~k~i-l~~l~~ll 177 (2015)
..-|++|.+=|+.+. |-.+.+.+ +..|...+.+ ||+.++.+|+.+|.++....-..... ++.+ +++++.++
T Consensus 22 ~~~~~~a~~nl~vl~re~aga~~i~~~~~~~~~~~l~~~~~~~~~~~~~~r~~~~~~~~~~~r~~~~~~~~~~~~~~~~~ 101 (810)
T 3now_A 22 IDKRRAAANNLVVLAKEQTGAELLYKDHCIAKVASLTKVEKDQDIYVNMVHLVAALCENSVERTKGVLTELGVPWFMRVL 101 (810)
T ss_dssp SHHHHHHHHHHHHHSSCHHHHHHHHHTTHHHHHHHHHHHCCCHHHHHHHHHHHHHHHTTCHHHHHHHHHHSCHHHHHHHH
T ss_pred HHHHHHHHhhceeeeccccchHHHHhCchHHHHHHHHhccCchhHHHHHHHHHHHHHhccHHHHHHHHHHcCHHHHHHHH
Confidence 334566655444444 21223322 3455666677 99999999999999887643221100 1111 46788999
Q ss_pred cCCChhHHHHHHHHHHHHHHHhCCchhhHHHhhhChHHHH----HHHHHHHHhcCCCCCCCccchhhhhHhhhhhccccC
Q 000156 178 DHQDQNVRASSKGLTLELCRWIGKDPVKTILFEKMRDTMK----KELEVELVNVSGTARPTRKIRAEQDKELGQELISED 253 (2015)
Q Consensus 178 ~~~d~~VR~~a~~l~~ely~~lG~~~l~~~l~~~Lk~~q~----keLe~~f~k~~~~~~P~R~~rs~~~~~~~~ea~~~~ 253 (2015)
...+..+=.++..+++.++.-+-.. .+... .+--+... ++|+..+..+-... ..|.+ +...+...
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~-~~~~r~~~------- 170 (810)
T 3now_A 102 DQKHENCVSTAQFCLQTILNALSGL-KNKPD-SKPDKELCTRNNREIDTLLTCLVYSI-TDRTI-SGAARDGV------- 170 (810)
T ss_dssp HCCSTTHHHHHHHHHHHHHHHHHTC-CSSTT-CCCCHHHHHHTHHHHHHHHHHHHHHH-TCTTS-CHHHHHHH-------
T ss_pred cCCCHHHHHHHHHHHHHHHHHHhcc-ccccc-cCCcHHHHhhhhhHHHHHHHHHHHHh-hcccc-ChhhHHHH-------
Confidence 9999999999999998888666310 10100 11111111 22222211110000 00000 00000000
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCcccccc-cCcch--hhhhhhccCChHHHHHHHHHHHHHhc-CCCC-CCCChHHHHH
Q 000156 254 VGPGPSEESTADVPPEIDEYELVDPVDILT-PLEKS--GFWEGVKATKWSERKDAVAELTKLAS-TKRI-APGDFTEVCR 328 (2015)
Q Consensus 254 ~~~~~~~~~~~~~~~~iD~~dl~~~vdIl~-kl~~~--~f~~~l~s~kWkeR~eaL~~L~~l~~-~~ki-~~~~y~~l~~ 328 (2015)
+ +++- -+|.. .+.. .|.++ .+|..|...+. .|.+ .++.|
T Consensus 171 ----------------~---------~~~~~~~~~~~~~~~~-----~~~~~-~g~~~~l~v~~~~~~~~~~~~~----- 214 (810)
T 3now_A 171 ----------------I---------ELITRNVHYTALEWAE-----RLVEI-RGLCRLLDVCSELEDYKYESAM----- 214 (810)
T ss_dssp ----------------H---------HHHHHHTTCTTTTHHH-----HHHHT-THHHHHHHHHTCCSSSCCSSCC-----
T ss_pred ----------------H---------HHHHHhCCcccccccc-----chhhH-hhHHHHHHHHhcCccccccccC-----
Confidence 0 0000 00000 0111 15553 46777766653 2322 11111
Q ss_pred HHHHHhcccCHHHHHHHHHHHHHHHHHhh-----hcchhhhHhHHHHHHHHhccCcHHHHHHHHHHHHHHHHhc---C--
Q 000156 329 TLKKLITDVNIAVAVEAIQAIGNLARGLR-----THFSGSSRFLLPVLLEKLKEKKPTVAESLTQTLQAMHKAG---C-- 398 (2015)
Q Consensus 329 ~L~k~l~D~N~~V~~~A~~~l~~La~~L~-----~~f~~~~~~llp~LL~klkdkk~~V~~aa~~aL~al~~~~---~-- 398 (2015)
. .-...+..|.-|+..+-..|+ ..|...+..++.. +|......-.-.+..++.+++.-. +
T Consensus 215 ------~-~~~~~r~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~a~~alt~i~~g~~~~~~~ 284 (810)
T 3now_A 215 ------D-ITGSSSTIASVCLARIYENMYYDEAKARFTDQIDEYIKD---KLLAPDMESKVRVTVAITALLNGPLDVGNQ 284 (810)
T ss_dssp ------C-CCTTHHHHHHHHHHHHHHTCCSHHHHHHHHHHHHHHHHH---HHSSCCHHHHHHHHHHHHHHHSSSHHHHHH
T ss_pred ------C-CChhHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHH---HhccCChHhHHHHHHHHHHHhcCCHHHHHH
Confidence 1 112356677777777777776 4444444444444 443333333334466677666430 0
Q ss_pred -CChHhHHHHHHHHhhcCChHHHHHHHHHHHHHHHhcChhHHHHhhhhHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhC
Q 000156 399 -LNLVDVVEDVKTSVKNKVPLVRSLTLNWVTFCIETSSKAAVLKVHKDYVPICMECLNDGTPEVRDAAFSVLAAIAKSVG 477 (2015)
Q Consensus 399 -~~l~~il~~l~~~L~~Knp~vR~~~l~~L~~~l~~~~~~~l~~~l~~l~p~l~k~L~Ds~~~VR~aA~~al~~l~~~~G 477 (2015)
..-+..++.++..+.+.++.++..++..+..+... +..-....+.-+|.|...+...+..+|.-|.-+|+.+....+
T Consensus 285 ~~~~~G~v~~li~Ll~s~~~~~q~~A~~al~~aa~~--~~~R~~I~~~gv~~L~~Ll~s~~~~vr~~Al~~L~kl~s~~~ 362 (810)
T 3now_A 285 VVAREGILQMILAMATTDDELQQRVACECLIAASSK--KDKAKALCEQGVDILKRLYHSKNDGIRVRALVGLCKLGSYGG 362 (810)
T ss_dssp HHHTTTHHHHHHHHHHSSCHHHHHHHHHHHHHHTTS--HHHHHTTHHHHHHHHHHHTTCSCHHHHHHHHHHHHHHHTTTT
T ss_pred HHhccchHHHHHHHhCCCCHHHHHHHHHHHHHHcCC--cHHHHHHHHcCcHHHHHHHcCCCHHHHHHHHHHHHHhccccc
Confidence 00135678888889999999999998888875332 221112234445999999998999999988888877764333
Q ss_pred chHHHHHHHh--ccHHHHHHHHHHHhcCCCCCCCCCCCccccCCCCCCCCCCCCcccccccccccccCCCCCCCCCCCCC
Q 000156 478 MRPLERSIEK--LDDVRRNKLSEMIAGSGGDVATGTSSARVQTSGGSVPSVEASESSFVRKSAASMLSGKRPVSAAPASK 555 (2015)
Q Consensus 478 e~~~~~~l~~--Ld~~~~kkI~e~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~s~~~~~~P~~~~~~~~ 555 (2015)
...-.+.+.. +.+. -+.+...+...+.. + .+.+.+...+
T Consensus 363 ~d~~~~~~~~g~i~~L-v~~l~~lL~~~~~d-------------------~------~v~~~AveaL------------- 403 (810)
T 3now_A 363 QDAAIRPFGDGAALKL-AEACRRFLIKPGKD-------------------K------DIRRWAADGL------------- 403 (810)
T ss_dssp TTTSCCSSTTTHHHHH-HHHHHHHHHCSSCC-------------------S------SHHHHHHHHH-------------
T ss_pred cCccccchhhccHHHH-HHHHHHHhcCCCCC-------------------H------HHHHHHHHHH-------------
Confidence 1100000100 0000 01122222210000 0 0000000000
Q ss_pred CCCCCCCCCCCCCCCCCcCCCCCCCCCCCCCCCCCHHHHHHHhh-ccCcHHHHhhhccCCHHHHHHHHHHHHHHHHhccc
Q 000156 556 KGGPVKPSAKKDGSGKQETSKLTEAPEDVEPSEMSLEEIESRLG-SLIPADTVGQLKSAVWKERLEAISSLRQQVEAVQN 634 (2015)
Q Consensus 556 k~~~~k~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~ee~e~~~~-~ll~~~l~~~L~s~~Wk~Rl~a~e~L~~~v~~~~~ 634 (2015)
... ...++.-+.... .-+-+.+++.|.+.+-.....++..|.++..+.+.
T Consensus 404 -------------------ayL----------S~~~~vk~~lv~d~g~Ip~LV~LL~s~d~~i~~~al~~L~NLt~~~d~ 454 (810)
T 3now_A 404 -------------------AYL----------TLDAECKEKLIEDKASIHALMDLARGGNQSCLYGVVTTFVNLCNAYEK 454 (810)
T ss_dssp -------------------HHH----------TTSHHHHHHHHHCHHHHHHHHHHHHTTCGGGHHHHHHHHHHHTTCSCC
T ss_pred -------------------HHH----------hCCcHHHHHHHHccchHHHHHHHhCCCChHHHHHHHHHHHHHcCCchh
Confidence 000 001122221111 11235667777777777777888888777654210
Q ss_pred c-----------------------c---------------hHHHHHHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHcCC
Q 000156 635 L-----------------------D---------------QSVEILVRLVCMLPGWSEKNVQVQQQVIEVINYLAATATK 676 (2015)
Q Consensus 635 ~-----------------------~---------------~~~~~Lv~~L~~~pg~~DsN~qV~~~~Le~l~~l~~~~~~ 676 (2015)
. + .....|+.++ +..+..|+..+..+|..++.. ..
T Consensus 455 q~~~~~l~~la~~s~~~v~~~~~ld~~~~v~~r~~~VveaGaVp~LV~LL------~s~s~~vqe~Aa~aL~NLA~d-~~ 527 (810)
T 3now_A 455 QEMLPEMIELAKFAKQHIPEEHELDDVDFINKRITVLANEGITTALCALA------KTESHNSQELIARVLNAVCGL-KE 527 (810)
T ss_dssp CCCCCSCGGGTTTTCCSCCCSSCHHHHHHHHHHHHHHHHTTHHHHHHHHH------TCCCHHHHHHHHHHHHHHHTS-HH
T ss_pred hhhhHHHHHHHHHhhccCccccccccHHHHHHHHHHHHHCcCHHHHHHHH------cCCCHHHHHHHHHHHHHHcCC-HH
Confidence 0 0 0112333333 344567889999999888742 11
Q ss_pred CchhHH--HHHHHHHHhhhc--chhhhHHHHHHHHHHHhhhChhHH---------HHHHHHHhhhCCChhHHHHHHHHHH
Q 000156 677 FPKKCV--VLCLLGISERVA--DIKTRAHAMKCLTTFSEAVGPGFI---------FERLYKIMKDHKNPKVLSEGILWMV 743 (2015)
Q Consensus 677 ~~~~~~--~~il~~LveKlg--D~K~r~~a~~~L~~l~e~~~~~~V---------l~~L~~~l~~~KnpKv~~~~l~~L~ 743 (2015)
.+..+ .-++|.|+.-+. +.+.+..|..+|..++....++.+ ++.|+..+....+...+.+++..|.
T Consensus 528 -~r~~Vv~~Gaip~Lv~LL~s~~~~~k~~Aa~AL~nL~~~~~p~~~~~~~~~~~aIppLv~LL~~~~~~l~~~eAl~AL~ 606 (810)
T 3now_A 528 -LRGKVVQEGGVKALLRMALEGTEKGKRHATQALARIGITINPEVSFSGQRSLDVIRPLLNLLQQDCTALENFESLMALT 606 (810)
T ss_dssp -HHHHHHHTTHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHSCHHHHTTTHHHHHTHHHHHHTTSTTSCHHHHHHHHHHHH
T ss_pred -HHHHHHHCCCHHHHHHHHccCCHHHHHHHHHHHHHHhcCCChhhhhcchhhhcHHHHHHHHhCCCCcHHHHHHHHHHHH
Confidence 11222 125777776654 457888999999988876555443 3344444322224455668888888
Q ss_pred HHHHHh---CCCCCChhhHHHHHHhcCCCCCchhHHHHHHHHHHHHHHHhChhHHhhhhhccHHHHHHHHHHHhcCCCCC
Q 000156 744 SAVEDF---GVSHLKLKDLIDFCKDTGLQSSAAATRNATIKLLGALHKFVGPDIKGFLADVKPALLSALDAEYEKNPFEG 820 (2015)
Q Consensus 744 ~li~~f---G~~~l~~k~li~~l~~~gL~~sn~~VR~aA~~ll~~Ly~~~G~~l~~~L~~lkp~ll~~Le~ef~k~~~~~ 820 (2015)
++...- ....+. ...++.+..+ +.+.++.||.+|..+++.|.. +++.... |.. +.
T Consensus 607 NLa~~~d~~~~~Ii~-aG~l~~Lv~L-L~s~~~~Vq~~A~~~L~NLa~--~~~~~~~---------------~v~--~~- 664 (810)
T 3now_A 607 NLASMNESVRQRIIK-EQGVSKIEYY-LMEDHLYLTRAAAQCLCNLVM--SEDVIKM---------------FEG--NN- 664 (810)
T ss_dssp HHTTSCHHHHHHHHH-TTHHHHHHHH-HHSCCTTHHHHHHHHHHHHTT--SHHHHHH---------------HHS--SS-
T ss_pred HHhcCCHHHHHHHHH-cCCHHHHHHH-HcCCCHHHHHHHHHHHHHHhC--ChHHHHH---------------HHh--cc-
Confidence 776410 000000 1245566666 788999999999999998853 3332111 110 00
Q ss_pred CCCCcccccCccccCCCCCCCCCCCCCcccccccchHHHHhcCCCChHHHHHHHHHHHHHHHhccccCCCCCh-hhHHHH
Q 000156 821 TVVPKKTVRASESTSSVSSGGSDGLPREDISGKFTPTLVKSLESPDWKVRLESIEAVNKILEEANKRIQPAGT-GELFGG 899 (2015)
Q Consensus 821 ~p~p~R~~r~~~~~~s~~~~~~d~lprvdIs~~L~~~ll~~l~d~~Wk~R~eale~L~~ll~~a~~~I~~~~~-~eL~~~ 899 (2015)
...+-|+..+.+.+-.+|.+|.-.|..+.......++.-.- ...++.
T Consensus 665 --------------------------------g~l~~Lv~LL~s~d~~vq~~Aa~ALanLt~~s~~~~~~ii~~~g~I~~ 712 (810)
T 3now_A 665 --------------------------------DRVKFLALLCEDEDEETATACAGALAIITSVSVKCCEKILAIASWLDI 712 (810)
T ss_dssp --------------------------------SHHHHHHHGGGCSSHHHHHHHHHHHHHHHHHCHHHHHHHHTSTTHHHH
T ss_pred --------------------------------CcHHHHHHHhcCCCHHHHHHHHHHHHHHhCCCHHHHHHHHHHcCCHHH
Confidence 01245777788888999999999999988631111111000 346788
Q ss_pred HHhccccchHHHHHHHHHHHHHHHHHhChhhHHhh--hHHHHHHHHHhCCC---cHHHHHHHHHHHHHHHHh
Q 000156 900 LRGRLYDSNKNLVMATLITLGAVASAMGPAVEKSS--KGVLSDILKCLGDN---KKHMRECTLTVLDAWLAA 966 (2015)
Q Consensus 900 L~~rL~DsN~~V~~~Al~~l~~La~alg~~f~~~~--~~llp~ll~~L~D~---k~~Vr~aa~~aL~~i~~~ 966 (2015)
|...|.+.+..++..|+.++..++.+ +.+...++ ...++++...+.++ +..+++.|.++|..+...
T Consensus 713 Lv~LL~s~d~~vq~~A~~aL~NL~~~-s~e~~~~l~e~G~i~~L~~LL~~~d~~~~~i~e~Al~aL~~ll~~ 783 (810)
T 3now_A 713 LHTLIANPSPAVQHRGIVIILNMINA-GEEIAKKLFETDIMELLSGLGQLPDDTRAKAREVATQCLAAAERY 783 (810)
T ss_dssp HHHHHTCSSHHHHHHHHHHHHHHHTT-CHHHHHHHHTSTHHHHHTTSCCCTTSTTHHHHHHHHHHHHHHHHH
T ss_pred HHHHHCCCCHHHHHHHHHHHHHHHhC-CHHHHHHHHHCCCHHHHHHHHhCcccCcHHHHHHHHHHHHHHHhC
Confidence 88889999999999999999999873 33333332 23788888888765 678999999999988764
No 45
>1jdh_A Beta-catenin; beta-catenin, protein-protein complex, transcription; 1.90A {Homo sapiens} SCOP: a.118.1.1 PDB: 1qz7_A 1g3j_A 1th1_A* 1i7w_A* 1i7x_A 1jpp_A 1m1e_A 1v18_A* 3oux_A 3ouw_A 1jpw_A 3tx7_A* 2gl7_A 1t08_A 1luj_A 2bct_A 3bct_A* 3ifq_A* 3sla_A 3sl9_A
Probab=98.63 E-value=1.5e-05 Score=103.39 Aligned_cols=482 Identities=13% Similarity=0.063 Sum_probs=272.2
Q ss_pred HHHHHHHHhcccCHHHHHHHHHHHHHHHHHhhhcchhh-hHhHHHHHHHHhccC-cHHHHHHHHHHHHHHHHhc--C--C
Q 000156 326 VCRTLKKLITDVNIAVAVEAIQAIGNLARGLRTHFSGS-SRFLLPVLLEKLKEK-KPTVAESLTQTLQAMHKAG--C--L 399 (2015)
Q Consensus 326 l~~~L~k~l~D~N~~V~~~A~~~l~~La~~L~~~f~~~-~~~llp~LL~klkdk-k~~V~~aa~~aL~al~~~~--~--~ 399 (2015)
.++.|.+.+.+.+..++..|+.+|..|+..-...-.-. ....++.|++.+... ...++..+..+|..+.... . .
T Consensus 18 ~i~~Lv~lL~~~~~~v~~~A~~~L~~l~~~~~~~~~~~~~~~~i~~Lv~~L~~~~~~~~~~~a~~~L~~ls~~~~~~~~i 97 (529)
T 1jdh_A 18 AIPELTKLLNDEDQVVVNKAAVMVHQLSKKEASRHAIMRSPQMVSAIVRTMQNTNDVETARCTAGTLHNLSHHREGLLAI 97 (529)
T ss_dssp HHHHHHHHHTCSCHHHHHHHHHHHHHHHTSHHHHHHHHTCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHTTSHHHHHHH
T ss_pred hHHHHHHHhCCCCHHHHHHHHHHHHHHHcCCccHHHHHhCcchHHHHHHHHhcCCCHHHHHHHHHHHHHHHcCchhHHHH
Confidence 46666677788899999999999999986432111111 236889999998754 7888888888888875320 0 0
Q ss_pred ChHhHHHHHHHHhhcCChHHHHHHHHHHHHHHHhcChhHHHHhhhhHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhCch
Q 000156 400 NLVDVVEDVKTSVKNKVPLVRSLTLNWVTFCIETSSKAAVLKVHKDYVPICMECLNDGTPEVRDAAFSVLAAIAKSVGMR 479 (2015)
Q Consensus 400 ~l~~il~~l~~~L~~Knp~vR~~~l~~L~~~l~~~~~~~l~~~l~~l~p~l~k~L~Ds~~~VR~aA~~al~~l~~~~Ge~ 479 (2015)
.-...++.+...+++.++.++..++..|..+........-.-.-...+|.+++++.+.++++|..+..+|..+.. +..
T Consensus 98 ~~~g~i~~L~~lL~~~~~~v~~~a~~~L~~l~~~~~~~~~~i~~~g~i~~L~~ll~~~~~~~~~~~~~~L~~la~--~~~ 175 (529)
T 1jdh_A 98 FKSGGIPALVKMLGSPVDSVLFYAITTLHNLLLHQEGAKMAVRLAGGLQKMVALLNKTNVKFLAITTDCLQILAY--GNQ 175 (529)
T ss_dssp HHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHHHHCTTHHHHHHHHTHHHHHHHGGGCCCHHHHHHHHHHHHHHHT--TCH
T ss_pred HHcCCHHHHHHHHcCCCHHHHHHHHHHHHHHhcCCcchHHHHHHcCCHHHHHHHHhcCCHHHHHHHHHHHHHHHh--CCH
Confidence 012467888889999999999999999998776533211000114578999999999999999999999986653 332
Q ss_pred HHHHHHHhccHHHHHHHHHHHhcCCCCCCCCCCCccccCCCCCCCCCCCCcccccccccccccCCCCCCCCCCCCCCCCC
Q 000156 480 PLERSIEKLDDVRRNKLSEMIAGSGGDVATGTSSARVQTSGGSVPSVEASESSFVRKSAASMLSGKRPVSAAPASKKGGP 559 (2015)
Q Consensus 480 ~~~~~l~~Ld~~~~kkI~e~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~s~~~~~~P~~~~~~~~k~~~ 559 (2015)
.....+-.-+. ...+.+.+...
T Consensus 176 ~~~~~i~~~~~--i~~L~~ll~~~-------------------------------------------------------- 197 (529)
T 1jdh_A 176 ESKLIILASGG--PQALVNIMRTY-------------------------------------------------------- 197 (529)
T ss_dssp HHHHHHHHTTH--HHHHHHHHHHC--------------------------------------------------------
T ss_pred HHHHHHHHCCC--HHHHHHHHHhC--------------------------------------------------------
Confidence 21111111000 00111111100
Q ss_pred CCCCCCCCCCCCCcCCCCCCCCCCCCCCCCCHHHHHHHhhccCcHHHHhhhcc-CCHHHHHHHHHHHHHHHHhccccchH
Q 000156 560 VKPSAKKDGSGKQETSKLTEAPEDVEPSEMSLEEIESRLGSLIPADTVGQLKS-AVWKERLEAISSLRQQVEAVQNLDQS 638 (2015)
Q Consensus 560 ~k~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~ee~e~~~~~ll~~~l~~~L~s-~~Wk~Rl~a~e~L~~~v~~~~~~~~~ 638 (2015)
+.++....+ ..++..|.. ..-+.. ++.. ..
T Consensus 198 ------------------------------~~~~~~~~a-----~~~L~~l~~~~~~~~~---------~~~~-----g~ 228 (529)
T 1jdh_A 198 ------------------------------TYEKLLWTT-----SRVLKVLSVCSSNKPA---------IVEA-----GG 228 (529)
T ss_dssp ------------------------------CCHHHHHHH-----HHHHHHHTTSTTHHHH---------HHHT-----TH
T ss_pred ------------------------------ChHHHHHHH-----HHHHHHHhcCcccHHH---------HHHC-----CC
Confidence 000000000 011111111 111100 0000 01
Q ss_pred HHHHHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHhhhcc--hhhhHHHHHHHHHHHhhhC--
Q 000156 639 VEILVRLVCMLPGWSEKNVQVQQQVIEVINYLAATATKFPKKCVVLCLLGISERVAD--IKTRAHAMKCLTTFSEAVG-- 714 (2015)
Q Consensus 639 ~~~Lv~~L~~~pg~~DsN~qV~~~~Le~l~~l~~~~~~~~~~~~~~il~~LveKlgD--~K~r~~a~~~L~~l~e~~~-- 714 (2015)
.+.++.+ +.+.+..+...++.++..+....+... ....++|.|+.-+.+ ..++..+..+|..++....
T Consensus 229 ~~~L~~l------l~~~~~~~~~~a~~~L~~l~~~~~~~~--~~~~~i~~L~~ll~~~~~~v~~~a~~~L~~L~~~~~~~ 300 (529)
T 1jdh_A 229 MQALGLH------LTDPSQRLVQNCLWTLRNLSDAATKQE--GMEGLLGTLVQLLGSDDINVVTCAAGILSNLTCNNYKN 300 (529)
T ss_dssp HHHHHTT------TTSSCHHHHHHHHHHHHHHHTTCTTCS--CCHHHHHHHHHHTTCSCHHHHHHHHHHHHHHTTTCHHH
T ss_pred HHHHHHH------HhCCChHHHHHHHHHHHHHhcCChhhH--HHHhHHHHHHHHHcCCCHHHHHHHHHHHHHHhcCCHHH
Confidence 2223332 345567788888888888776433221 234567777776654 5678888888887765311
Q ss_pred h-----hHHHHHHHHHhhh-CCChhHHHHHHHHHHHHHHHhCCC-----CCChhhHHHHHHhcCCCCCc-hhHHHHHHHH
Q 000156 715 P-----GFIFERLYKIMKD-HKNPKVLSEGILWMVSAVEDFGVS-----HLKLKDLIDFCKDTGLQSSA-AATRNATIKL 782 (2015)
Q Consensus 715 ~-----~~Vl~~L~~~l~~-~KnpKv~~~~l~~L~~li~~fG~~-----~l~~k~li~~l~~~gL~~sn-~~VR~aA~~l 782 (2015)
- .-+++.++..+.. ..++.++..++..|.++....+.. .+--...++.+..+ +.+.+ +.||..|..+
T Consensus 301 ~~~~~~~~~v~~L~~ll~~~~~~~~v~~~a~~~L~nl~~~~~~~~~~~~~i~~~~~i~~L~~l-L~~~~~~~v~~~a~~~ 379 (529)
T 1jdh_A 301 KMMVCQVGGIEALVRTVLRAGDREDITEPAICALRHLTSRHQEAEMAQNAVRLHYGLPVVVKL-LHPPSHWPLIKATVGL 379 (529)
T ss_dssp HHHHHHTTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTSSSTTHHHHHHHHHHTTCHHHHHHT-TSTTCCHHHHHHHHHH
T ss_pred HHHHHHcCChHHHHHHHHccCCHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHcCChhHHHHH-hccccchHHHHHHHHH
Confidence 0 1145666666543 345899999999998875321110 00001235566666 88776 6999999999
Q ss_pred HHHHHHHhChhHHhhh--hhccHHHHHHHHHHHhcCCCCCCCCCcccccCccccCCCCCCCCCCCCCcccccccchHHHH
Q 000156 783 LGALHKFVGPDIKGFL--ADVKPALLSALDAEYEKNPFEGTVVPKKTVRASESTSSVSSGGSDGLPREDISGKFTPTLVK 860 (2015)
Q Consensus 783 l~~Ly~~~G~~l~~~L--~~lkp~ll~~Le~ef~k~~~~~~p~p~R~~r~~~~~~s~~~~~~d~lprvdIs~~L~~~ll~ 860 (2015)
++.+.. ++.....+ .++-|.+...+.....+++.+..-. +. . . .+....
T Consensus 380 l~nl~~--~~~~~~~~~~~~~i~~L~~ll~~~~~~v~~~a~~~----l~------------n--~---~~~~~~------ 430 (529)
T 1jdh_A 380 IRNLAL--CPANHAPLREQGAIPRLVQLLVRAHQDTQRRTSMG----GT------------Q--Q---QFVEGV------ 430 (529)
T ss_dssp HHHHTT--SGGGHHHHHHTTHHHHHHHHHHHHHHHHC--------------------------------CBTTB------
T ss_pred HHHHhc--ChhhhHHHHHcCCHHHHHHHHHHHhHHHHHHHhcc----cC------------c--h---hhhccc------
Confidence 888864 33333323 3566777777766544433211000 00 0 0 000000
Q ss_pred hcCCCChHHHHHHHHHHHHHHHhcc--ccCCCCChhhHHHHHHhccccchHHHHHHHHHHHHHHHHHhChhhHHhh--hH
Q 000156 861 SLESPDWKVRLESIEAVNKILEEAN--KRIQPAGTGELFGGLRGRLYDSNKNLVMATLITLGAVASAMGPAVEKSS--KG 936 (2015)
Q Consensus 861 ~l~d~~Wk~R~eale~L~~ll~~a~--~~I~~~~~~eL~~~L~~rL~DsN~~V~~~Al~~l~~La~alg~~f~~~~--~~ 936 (2015)
....++..++..+..++.... ..+. -...++.|...+.|.+..|+..|+.++..++. .+.....+ ..
T Consensus 431 ----~~~~i~~~~~~al~~L~~~~~~~~~l~---~~~~v~~l~~ll~~~~~~v~~~a~~~l~~l~~--~~~~~~~i~~~~ 501 (529)
T 1jdh_A 431 ----RMEEIVEGCTGALHILARDVHNRIVIR---GLNTIPLFVQLLYSPIENIQRVAAGVLCELAQ--DKEAAEAIEAEG 501 (529)
T ss_dssp ----CHHHHHHHHHHHHHHHTTSHHHHHHHH---HTTCHHHHHHGGGCSCHHHHHHHHHHHHHHTT--SHHHHHHHHHTT
T ss_pred ----cHHHHHHHHHHHHHHHhcCchHHHHHh---ccCCccHHHHHHcCCchHHHHHHHHHHHHHhc--CHHHHHHHHHcC
Confidence 011233345555555432100 0011 02356788889999999999999999888762 12222222 13
Q ss_pred HHHHHHHHhCCCcHHHHHHHHHHHHHH
Q 000156 937 VLSDILKCLGDNKKHMRECTLTVLDAW 963 (2015)
Q Consensus 937 llp~ll~~L~D~k~~Vr~aa~~aL~~i 963 (2015)
.++.+...+.+.++.|+..|..+|..+
T Consensus 502 ~~~~L~~l~~~~~~~v~~~a~~aL~~l 528 (529)
T 1jdh_A 502 ATAPLTELLHSRNEGVATYAAAVLFRM 528 (529)
T ss_dssp CHHHHHHGGGCSSHHHHHHHHHHHHHH
T ss_pred ChHHHHHHhcCCCHHHHHHHHHHHHhc
Confidence 567888888899999999988888654
No 46
>1jdh_A Beta-catenin; beta-catenin, protein-protein complex, transcription; 1.90A {Homo sapiens} SCOP: a.118.1.1 PDB: 1qz7_A 1g3j_A 1th1_A* 1i7w_A* 1i7x_A 1jpp_A 1m1e_A 1v18_A* 3oux_A 3ouw_A 1jpw_A 3tx7_A* 2gl7_A 1t08_A 1luj_A 2bct_A 3bct_A* 3ifq_A* 3sla_A 3sl9_A
Probab=98.58 E-value=0.00013 Score=94.46 Aligned_cols=387 Identities=12% Similarity=0.046 Sum_probs=220.2
Q ss_pred hHhHHHHHHHHhccCcHHHHHHHHHHHHHHHHhcC-----CChHhHHHHHHHHhhc-CChHHHHHHHHHHHHHHHhcC-h
Q 000156 364 SRFLLPVLLEKLKEKKPTVAESLTQTLQAMHKAGC-----LNLVDVVEDVKTSVKN-KVPLVRSLTLNWVTFCIETSS-K 436 (2015)
Q Consensus 364 ~~~llp~LL~klkdkk~~V~~aa~~aL~al~~~~~-----~~l~~il~~l~~~L~~-Knp~vR~~~l~~L~~~l~~~~-~ 436 (2015)
....+|.+++.+++..+.+++.+..+|..+..... ......++.+...|.+ .++.++..++..|..+..... .
T Consensus 15 ~~~~i~~Lv~lL~~~~~~v~~~A~~~L~~l~~~~~~~~~~~~~~~~i~~Lv~~L~~~~~~~~~~~a~~~L~~ls~~~~~~ 94 (529)
T 1jdh_A 15 ATRAIPELTKLLNDEDQVVVNKAAVMVHQLSKKEASRHAIMRSPQMVSAIVRTMQNTNDVETARCTAGTLHNLSHHREGL 94 (529)
T ss_dssp --CHHHHHHHHHTCSCHHHHHHHHHHHHHHHTSHHHHHHHHTCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHTTSHHHH
T ss_pred hHhhHHHHHHHhCCCCHHHHHHHHHHHHHHHcCCccHHHHHhCcchHHHHHHHHhcCCCHHHHHHHHHHHHHHHcCchhH
Confidence 45678999999999999999999999998875310 0113567888888875 489999999999887533211 1
Q ss_pred hHHHHhhhhHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhCchHHHHHHHhccHHHHHHHHHHHhcCCCCCCCCCCCccc
Q 000156 437 AAVLKVHKDYVPICMECLNDGTPEVRDAAFSVLAAIAKSVGMRPLERSIEKLDDVRRNKLSEMIAGSGGDVATGTSSARV 516 (2015)
Q Consensus 437 ~~l~~~l~~l~p~l~k~L~Ds~~~VR~aA~~al~~l~~~~Ge~~~~~~l~~Ld~~~~kkI~e~~~~~~~~~~~~~~~~~~ 516 (2015)
..+. -...+|.++.++.+.+++||..|..+|+.+...-.+. +..+.+ .+
T Consensus 95 ~~i~--~~g~i~~L~~lL~~~~~~v~~~a~~~L~~l~~~~~~~-------------~~~i~~---~g------------- 143 (529)
T 1jdh_A 95 LAIF--KSGGIPALVKMLGSPVDSVLFYAITTLHNLLLHQEGA-------------KMAVRL---AG------------- 143 (529)
T ss_dssp HHHH--HTTHHHHHHHHTTCSCHHHHHHHHHHHHHHHHHCTTH-------------HHHHHH---HT-------------
T ss_pred HHHH--HcCCHHHHHHHHcCCCHHHHHHHHHHHHHHhcCCcch-------------HHHHHH---cC-------------
Confidence 1111 1358899999999999999999999998887654321 111111 00
Q ss_pred cCCCCCCCCCCCCcccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcCCCCCCCCCCCCCCCCCHHHHHH
Q 000156 517 QTSGGSVPSVEASESSFVRKSAASMLSGKRPVSAAPASKKGGPVKPSAKKDGSGKQETSKLTEAPEDVEPSEMSLEEIES 596 (2015)
Q Consensus 517 ~~~~~s~~~~~~~~~~~~~~~~~s~~~~~~P~~~~~~~~k~~~~k~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~ee~e~ 596 (2015)
T Consensus 144 -------------------------------------------------------------------------------- 143 (529)
T 1jdh_A 144 -------------------------------------------------------------------------------- 143 (529)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HhhccCcHHHHhhhccCCHHHHHHHHHHHHHHHHhcccc------chHHHHHHHHHhcCCCCcccHHHHHHHHHHHHHHH
Q 000156 597 RLGSLIPADTVGQLKSAVWKERLEAISSLRQQVEAVQNL------DQSVEILVRLVCMLPGWSEKNVQVQQQVIEVINYL 670 (2015)
Q Consensus 597 ~~~~ll~~~l~~~L~s~~Wk~Rl~a~e~L~~~v~~~~~~------~~~~~~Lv~~L~~~pg~~DsN~qV~~~~Le~l~~l 670 (2015)
.-+.++..|.+.+|+.|..+...|..+..+..+. ....+.++.++... ....+...+..++..+
T Consensus 144 -----~i~~L~~ll~~~~~~~~~~~~~~L~~la~~~~~~~~~i~~~~~i~~L~~ll~~~-----~~~~~~~~a~~~L~~l 213 (529)
T 1jdh_A 144 -----GLQKMVALLNKTNVKFLAITTDCLQILAYGNQESKLIILASGGPQALVNIMRTY-----TYEKLLWTTSRVLKVL 213 (529)
T ss_dssp -----HHHHHHHGGGCCCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHHHHHHHC-----CCHHHHHHHHHHHHHH
T ss_pred -----CHHHHHHHHhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHCCCHHHHHHHHHhC-----ChHHHHHHHHHHHHHH
Confidence 0023445556666777776666665443211000 00122233333210 0111111222222111
Q ss_pred HHHcCCCchhHHHHHHHHHHhhhcchhhhHHHHHHHHHHHhhhChhHHHHHHHHHhhhCCChhHHHHHHHHHHHHHHHhC
Q 000156 671 AATATKFPKKCVVLCLLGISERVADIKTRAHAMKCLTTFSEAVGPGFIFERLYKIMKDHKNPKVLSEGILWMVSAVEDFG 750 (2015)
Q Consensus 671 ~~~~~~~~~~~~~~il~~LveKlgD~K~r~~a~~~L~~l~e~~~~~~Vl~~L~~~l~~~KnpKv~~~~l~~L~~li~~fG 750 (2015)
.. ++..+.. +.+. -+++.+++.+ .+.++.++..++..|..+.....
T Consensus 214 ~~----------------------~~~~~~~-------~~~~----g~~~~L~~ll-~~~~~~~~~~a~~~L~~l~~~~~ 259 (529)
T 1jdh_A 214 SV----------------------CSSNKPA-------IVEA----GGMQALGLHL-TDPSQRLVQNCLWTLRNLSDAAT 259 (529)
T ss_dssp TT----------------------STTHHHH-------HHHT----THHHHHHTTT-TSSCHHHHHHHHHHHHHHHTTCT
T ss_pred hc----------------------CcccHHH-------HHHC----CCHHHHHHHH-hCCChHHHHHHHHHHHHHhcCCh
Confidence 10 1111111 1111 1345555554 45688888888888888776433
Q ss_pred CCCCChhhHHHHHHhcCCCCCchhHHHHHHHHHHHHHHHhChhHHhhhhhccHHHHHHHHHHHhcCCCCCCCCCcccccC
Q 000156 751 VSHLKLKDLIDFCKDTGLQSSAAATRNATIKLLGALHKFVGPDIKGFLADVKPALLSALDAEYEKNPFEGTVVPKKTVRA 830 (2015)
Q Consensus 751 ~~~l~~k~li~~l~~~gL~~sn~~VR~aA~~ll~~Ly~~~G~~l~~~L~~lkp~ll~~Le~ef~k~~~~~~p~p~R~~r~ 830 (2015)
. ......+++.+..+ +.+.++.||..|..++..|... ++.....+ .+ ..
T Consensus 260 ~-~~~~~~~i~~L~~l-l~~~~~~v~~~a~~~L~~L~~~-~~~~~~~~-----------~~----~~------------- 308 (529)
T 1jdh_A 260 K-QEGMEGLLGTLVQL-LGSDDINVVTCAAGILSNLTCN-NYKNKMMV-----------CQ----VG------------- 308 (529)
T ss_dssp T-CSCCHHHHHHHHHH-TTCSCHHHHHHHHHHHHHHTTT-CHHHHHHH-----------HH----TT-------------
T ss_pred h-hHHHHhHHHHHHHH-HcCCCHHHHHHHHHHHHHHhcC-CHHHHHHH-----------HH----cC-------------
Confidence 2 22346788888888 9999999999999999887432 11111111 00 00
Q ss_pred ccccCCCCCCCCCCCCCcccccccchHHHHhcC--CCChHHHHHHHHHHHHHHHhccccC---CCCC-hhhHHHHHHhcc
Q 000156 831 SESTSSVSSGGSDGLPREDISGKFTPTLVKSLE--SPDWKVRLESIEAVNKILEEANKRI---QPAG-TGELFGGLRGRL 904 (2015)
Q Consensus 831 ~~~~~s~~~~~~d~lprvdIs~~L~~~ll~~l~--d~~Wk~R~eale~L~~ll~~a~~~I---~~~~-~~eL~~~L~~rL 904 (2015)
..+.+++.+. +.+|.+|..|+..|..+.... ... .... -...++.|...|
T Consensus 309 -----------------------~v~~L~~ll~~~~~~~~v~~~a~~~L~nl~~~~-~~~~~~~~~i~~~~~i~~L~~lL 364 (529)
T 1jdh_A 309 -----------------------GIEALVRTVLRAGDREDITEPAICALRHLTSRH-QEAEMAQNAVRLHYGLPVVVKLL 364 (529)
T ss_dssp -----------------------HHHHHHHHHHHHTTCHHHHHHHHHHHHHHTSSS-TTHHHHHHHHHHTTCHHHHHHTT
T ss_pred -----------------------ChHHHHHHHHccCCHHHHHHHHHHHHHHHHcCC-chHHHHHHHHHHcCChhHHHHHh
Confidence 1123334343 235888889988888775310 000 0000 023467888888
Q ss_pred ccch-HHHHHHHHHHHHHHHHHhChhhHHh-h-hHHHHHHHHHhCCCcHHHHHHHHHHHHH
Q 000156 905 YDSN-KNLVMATLITLGAVASAMGPAVEKS-S-KGVLSDILKCLGDNKKHMRECTLTVLDA 962 (2015)
Q Consensus 905 ~DsN-~~V~~~Al~~l~~La~alg~~f~~~-~-~~llp~ll~~L~D~k~~Vr~aa~~aL~~ 962 (2015)
.+.+ ..++..++.+++.++. ++..... . ..++|.++..|.+....+|..+.-++..
T Consensus 365 ~~~~~~~v~~~a~~~l~nl~~--~~~~~~~~~~~~~i~~L~~ll~~~~~~v~~~a~~~l~n 423 (529)
T 1jdh_A 365 HPPSHWPLIKATVGLIRNLAL--CPANHAPLREQGAIPRLVQLLVRAHQDTQRRTSMGGTQ 423 (529)
T ss_dssp STTCCHHHHHHHHHHHHHHTT--SGGGHHHHHHTTHHHHHHHHHHHHHHHHC---------
T ss_pred ccccchHHHHHHHHHHHHHhc--ChhhhHHHHHcCCHHHHHHHHHHHhHHHHHHHhcccCc
Confidence 8776 5899999999998884 3332222 2 2578999999988877788766555543
No 47
>3m1i_C Exportin-1; heat repeat, GTP-binding, nucleotide-binding, NUCL protein transport, transport, cytoplasm, GTPase activation; HET: GTP; 2.00A {Saccharomyces cerevisiae} PDB: 2l1l_B
Probab=98.55 E-value=0.017 Score=81.41 Aligned_cols=505 Identities=12% Similarity=0.066 Sum_probs=269.0
Q ss_pred ccCChHHHHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHhhhcc----hhhhHh-HHH
Q 000156 295 KATKWSERKDAVAELTKLASTKRIAPGDFTEVCRTLKKLITDVNIAVAVEAIQAIGNLARGLRTHF----SGSSRF-LLP 369 (2015)
Q Consensus 295 ~s~kWkeR~eaL~~L~~l~~~~ki~~~~y~~l~~~L~k~l~D~N~~V~~~A~~~l~~La~~L~~~f----~~~~~~-llp 369 (2015)
-+.+=..|++|-+.|..+-+.|.. +.-+...|.. +.+..++..|+.++....+.--..+ ..+++. ++.
T Consensus 26 ~~p~~~~r~~Ae~~L~~~~~~p~~----~~~l~~iL~~---s~~~~vr~~aa~~Lk~~i~~~W~~l~~~~~~~ir~~ll~ 98 (1049)
T 3m1i_C 26 YQGSGVQQKQAQEILTKFQDNPDA----WQKADQILQF---STNPQSKFIALSILDKLITRKWKLLPNDHRIGIRNFVVG 98 (1049)
T ss_dssp HHCCHHHHHHHHHHHHHHHHSTTG----GGGHHHHHHH---CSCHHHHHHHHHHHHHHHHHTGGGSCHHHHHHHHHHHHH
T ss_pred hCCChHHHHHHHHHHHHHHhCchH----HHHHHHHHhh---CCCHHHHHHHHHHHHHHHHhhCccCCHHHHHHHHHHHHH
Confidence 344445799999889888665521 2223333322 5678899999999988876421222 223333 333
Q ss_pred HHHHHhccC-----cHHHHHHHHHHHHHHHHh-cCCChHhHHHHHHHHhhcCChHHHHHHHHHHHHHHHhcC---h----
Q 000156 370 VLLEKLKEK-----KPTVAESLTQTLQAMHKA-GCLNLVDVVEDVKTSVKNKVPLVRSLTLNWVTFCIETSS---K---- 436 (2015)
Q Consensus 370 ~LL~klkdk-----k~~V~~aa~~aL~al~~~-~~~~l~~il~~l~~~L~~Knp~vR~~~l~~L~~~l~~~~---~---- 436 (2015)
.+...-.+. .+.|+..+..++..++.. .....+.+++++...++ .++..+..++.+|..+.+... .
T Consensus 99 ~l~~~~~~~~~~~~~~~i~~kl~~~ia~Ia~~~~p~~Wp~ll~~L~~~~~-~~~~~~~~~l~~L~~l~eev~~~~~~~~~ 177 (1049)
T 3m1i_C 99 MIISMCQDDEVFKTQKNLINKSDLTLVQILKQEWPQNWPEFIPELIGSSS-SSVNVCENNMIVLKLLSEEVFDFSAEQMT 177 (1049)
T ss_dssp HHHHHHHCHHHHHHCHHHHHHHHHHHHHHHHHHTTTTCTTHHHHHHHHHT-TCHHHHHHHHHHHHHHHHHHHTSCTTTSC
T ss_pred HHHhhCCccccchhhHHHHHHHHHHHHHHHHHhCcccchHHHHHHHHHHc-cChHHHHHHHHHHHHHHHHHHHhcchhhh
Confidence 333222111 368899999999999887 22345789999998886 566667777777766553221 0
Q ss_pred --------hHHHHhhhhHHHHHHHHhcCC-CHHHHHHHHHHHHHHHHHhCch------HHHHHHHhc--cHHHHHHHHHH
Q 000156 437 --------AAVLKVHKDYVPICMECLNDG-TPEVRDAAFSVLAAIAKSVGMR------PLERSIEKL--DDVRRNKLSEM 499 (2015)
Q Consensus 437 --------~~l~~~l~~l~p~l~k~L~Ds-~~~VR~aA~~al~~l~~~~Ge~------~~~~~l~~L--d~~~~kkI~e~ 499 (2015)
..+...++.+...+..++++. ++++|.++.+|+..+...+.-. -+..++..+ ++.-+...-++
T Consensus 178 ~~r~~~lk~~l~~~~~~i~~~~~~~l~~~~~~~~~~~aL~~l~~~l~wi~~~~~~~~~ll~~l~~~~l~~~~~~~~a~~~ 257 (1049)
T 3m1i_C 178 QAKALHLKNSMSKEFEQIFKLCFQVLEQGSSSSLIVATLESLLRYLHWIPYRYIYETNILELLSTKFMTSPDTRAITLKC 257 (1049)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHTTTSCTHHHHSSSHHHHHHTHHHHSHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhhCCHHHHhhhhHHHHHHHHhCCCHhHHHHHHHH
Confidence 223345677777788888654 5789999999998776544421 111111111 11111111122
Q ss_pred HhcCCCCCCCCCCCccccCCCCCCCCCCCCcccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcCCCCCC
Q 000156 500 IAGSGGDVATGTSSARVQTSGGSVPSVEASESSFVRKSAASMLSGKRPVSAAPASKKGGPVKPSAKKDGSGKQETSKLTE 579 (2015)
Q Consensus 500 ~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~s~~~~~~P~~~~~~~~k~~~~k~~~~~~~~~~~~~s~~~~ 579 (2015)
+.... + .+.+
T Consensus 258 L~~i~--------------------------------------~-~~~~------------------------------- 267 (1049)
T 3m1i_C 258 LTEVS--------------------------------------N-LKIP------------------------------- 267 (1049)
T ss_dssp HHHHH--------------------------------------H-CCCC-------------------------------
T ss_pred HHHHH--------------------------------------h-CCCC-------------------------------
Confidence 11100 0 0000
Q ss_pred CCCCCCCCCCCHHHHHHHhhccCcHHHHhhh------------------ccCCHHHHHHHHHHHHHH-------HHhccc
Q 000156 580 APEDVEPSEMSLEEIESRLGSLIPADTVGQL------------------KSAVWKERLEAISSLRQQ-------VEAVQN 634 (2015)
Q Consensus 580 ~~~~~~~~~~s~ee~e~~~~~ll~~~l~~~L------------------~s~~Wk~Rl~a~e~L~~~-------v~~~~~ 634 (2015)
+. . ......+..++ +.++..+ .+.++..+..-.+-+..+ +...+.
T Consensus 268 ------~~--~-~~~~~~~~~l~-~~~l~~l~~si~p~~~~l~~~~~~~~~~d~~~~~~l~~~~~~~~~~~~~~~~~~~~ 337 (1049)
T 3m1i_C 268 ------QD--N-DLIKRQTVLFF-QNTLQQIATSVMPVTADLKATYANANGNDQSFLQDLAMFLTTYLARNRALLESDES 337 (1049)
T ss_dssp ------TT--C-HHHHHHHHHHH-HHHHHHHHHHTCCTTSCHHHHHHHTCTTHHHHHHHHHHHHHHHHHHHHHHHHSCGG
T ss_pred ------cc--h-hhHHHHHHHHH-HHHHHHHHHhhCCCcccHHHHhccCCcchHHHHHHHHHHHHHHHHHHHHHHcCChh
Confidence 00 0 00000000010 0111100 111121111111111111 111111
Q ss_pred cchHHHHHHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHc---C---CCchhHHHHHHHHHHhhhcc----------h--
Q 000156 635 LDQSVEILVRLVCMLPGWSEKNVQVQQQVIEVINYLAATA---T---KFPKKCVVLCLLGISERVAD----------I-- 696 (2015)
Q Consensus 635 ~~~~~~~Lv~~L~~~pg~~DsN~qV~~~~Le~l~~l~~~~---~---~~~~~~~~~il~~LveKlgD----------~-- 696 (2015)
.......++.++..... ..+..|...++++|..+++.. + ......+..+++.++.++.- .
T Consensus 338 ~~~~l~~~l~~ll~~~~--~~d~~v~~~~lefw~~l~~~l~~~~~~~~~~~~~l~~Lv~~ll~~m~~~ed~~~~~dd~~e 415 (1049)
T 3m1i_C 338 LRELLLNAHQYLIQLSK--IEERELFKTTLDYWHNLVADLFYEPLKKHIYEEICSQLRLVIIENMVRPEEVLVVENDEGE 415 (1049)
T ss_dssp GHHHHHHHHHHHHHHHT--SSCHHHHHHHHHHHHHHHHHHHHSTTCGGGGHHHHHHHHHHHHHTCCCCTTCCEEECTTSC
T ss_pred hHHHHHHHHHHHHHHHc--CCcHHHHHHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHHhcCCCcceeeeeCCCCc
Confidence 11122223333321101 224567888999999988732 1 22345667777888877621 0
Q ss_pred ------------hhhHHHHHHHHHHHhhhChhHHHHHHHHHhh---h--CCChhHHHHHHHHHHHHHHHhCCCCC-C-hh
Q 000156 697 ------------KTRAHAMKCLTTFSEAVGPGFIFERLYKIMK---D--HKNPKVLSEGILWMVSAVEDFGVSHL-K-LK 757 (2015)
Q Consensus 697 ------------K~r~~a~~~L~~l~e~~~~~~Vl~~L~~~l~---~--~KnpKv~~~~l~~L~~li~~fG~~~l-~-~k 757 (2015)
-.+..+.++|..++.. .+..++..+++.+. . ..+|+.+.+++..+..+.+..+...- . +.
T Consensus 416 ~~r~~~~d~d~~~~~~~~~~~L~~l~~~-~~~~~l~~v~~~l~~~l~~~~~~W~~~eaal~algsia~~~~~~~e~~~l~ 494 (1049)
T 3m1i_C 416 IVREFVKESDTIQLYKSEREVLVYLTHL-NVIDTEEIMISKLARQIDGSEWSWHNINTLSWAIGSISGTMSEDTEKRFVV 494 (1049)
T ss_dssp EEECSSCCHHHHHHHHHHHHHHHHHHHH-CHHHHHHHHHHHHHHHHTSSSCCHHHHHHHHHHHHHTTTSSCHHHHHHHHH
T ss_pred chHhhhccchHHHHHHHHHHHHHHHHcc-CHHHHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHHhcccCchhhHHHHH
Confidence 1244678888888854 44555555555431 2 46899999999888866543221100 1 23
Q ss_pred hHHHHHHhcCCC-----CCchhHHHHHHHHHHHHHHHhChhHHhhhhhccHHHHHHHHHHHhcCCCCCCCCCcccccCcc
Q 000156 758 DLIDFCKDTGLQ-----SSAAATRNATIKLLGALHKFVGPDIKGFLADVKPALLSALDAEYEKNPFEGTVVPKKTVRASE 832 (2015)
Q Consensus 758 ~li~~l~~~gL~-----~sn~~VR~aA~~ll~~Ly~~~G~~l~~~L~~lkp~ll~~Le~ef~k~~~~~~p~p~R~~r~~~ 832 (2015)
.+++.+..+ .. +..+.||..+..+++.+..|.... ..||..
T Consensus 495 ~v~~~l~~l-~~~~~~~~~~~~v~~~~~~~lgry~~~~~~~-~~~l~~-------------------------------- 540 (1049)
T 3m1i_C 495 TVIKDLLDL-TVKKRGKDNKAVVASDIMYVVGQYPRFLKAH-WNFLRT-------------------------------- 540 (1049)
T ss_dssp HHHHHHHHH-TTSSCSHHHHHHHHHHHHHHHHHCHHHHHHC-HHHHHH--------------------------------
T ss_pred HHHHHHHHH-HhhhccccchHHHHHHHHHHHHHHHHHHHhH-HHHHHH--------------------------------
Confidence 455555443 22 234566666777777766554321 011100
Q ss_pred ccCCCCCCCCCCCCCcccccccchHHHHhcCCCChHHHHHHHHHHHHHHHhccccCC--------CCChhhHHHHHHhcc
Q 000156 833 STSSVSSGGSDGLPREDISGKFTPTLVKSLESPDWKVRLESIEAVNKILEEANKRIQ--------PAGTGELFGGLRGRL 904 (2015)
Q Consensus 833 ~~~s~~~~~~d~lprvdIs~~L~~~ll~~l~d~~Wk~R~eale~L~~ll~~a~~~I~--------~~~~~eL~~~L~~rL 904 (2015)
+.+.++..+.+.+-++|..|...+..++..+...+. |. +.+++..|...+
T Consensus 541 ---------------------vl~~ll~~l~~~~~~V~~~A~~al~~l~~~~~~~l~~~~~~~~~p~-~~~il~~l~~~~ 598 (1049)
T 3m1i_C 541 ---------------------VILKLFEFMHETHEGVQDMACDTFIKIVQKCKYHFVIQQPRESEPF-IQTIIRDIQKTT 598 (1049)
T ss_dssp ---------------------HHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHTHHHHSCCTTCSSCH-HHHHHHTHHHHH
T ss_pred ---------------------HHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCcH-HHHHHHHHHHHH
Confidence 122455556677788899999999999987644432 33 467777776666
Q ss_pred ccchHHHHHHHHHHHHHHHHHhCh--hhHHhhhHHHHHHHHHhC
Q 000156 905 YDSNKNLVMATLITLGAVASAMGP--AVEKSSKGVLSDILKCLG 946 (2015)
Q Consensus 905 ~DsN~~V~~~Al~~l~~La~alg~--~f~~~~~~llp~ll~~L~ 946 (2015)
.+....-....+++++.++.+.+. .+.+|+..+++.++..+.
T Consensus 599 ~~~~~~~~~~~~eai~~ii~~~~~~~~~~~~~~~l~~~~~~~~~ 642 (1049)
T 3m1i_C 599 ADLQPQQVHTFYKACGIIISEERSVAERNRLLSDLMQLPNMAWD 642 (1049)
T ss_dssp TTSCHHHHHHHHHHHHHHHHTCCSHHHHHHHHHHHTHHHHHHHH
T ss_pred HhCCHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHH
Confidence 554333345668899999988883 477889999988876654
No 48
>3tpo_A Importin subunit alpha-2; nuclear import, protein transport; 2.10A {Mus musculus} PDB: 1qgk_B 1qgr_B
Probab=98.53 E-value=8.1e-06 Score=106.39 Aligned_cols=376 Identities=11% Similarity=0.119 Sum_probs=234.0
Q ss_pred cHHHHhhhccCCHHHHHHHHHHHHHHHHhccc--cch-----HHHHHHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHcC
Q 000156 603 PADTVGQLKSAVWKERLEAISSLRQQVEAVQN--LDQ-----SVEILVRLVCMLPGWSEKNVQVQQQVIEVINYLAATAT 675 (2015)
Q Consensus 603 ~~~l~~~L~s~~Wk~Rl~a~e~L~~~v~~~~~--~~~-----~~~~Lv~~L~~~pg~~DsN~qV~~~~Le~l~~l~~~~~ 675 (2015)
-+++++.+.|.+-..++.|+..+.+++..... .+. ....|+++|. .+.|..++..+..+|..++....
T Consensus 78 l~~lv~~l~s~d~~~q~~a~~~~rklLs~~~~~~i~~ii~~G~ip~Lv~lL~-----~~~~~~~q~~Aa~aL~nia~~~~ 152 (529)
T 3tpo_A 78 VEDIVKGINSNNLESQLQATQAARKLLSREKQPPIDNIIRAGLIPKFVSFLG-----KTDCSPIQFESAWALTNIASGTS 152 (529)
T ss_dssp HHHHHHHHTSSCHHHHHHHHHHHHHHHTSSSCCCHHHHHHTTHHHHHHHHHT-----CTTCHHHHHHHHHHHHHHHTSCH
T ss_pred HHHHHHHhcCCCHHHHHHHHHHHHHHHcCCCCchHHHHHHCCCHHHHHHHHc-----CCCCHHHHHHHHHHHHHHHcCCH
Confidence 36788999999999999999999988754221 111 1234555553 34567788888888888875321
Q ss_pred CCchhHH-HHHHHHHHhhhcc--hhhhHHHHHHHHHHHhhhC--hhH-----HHHHHHHHhhhCC----ChhHHHHHHHH
Q 000156 676 KFPKKCV-VLCLLGISERVAD--IKTRAHAMKCLTTFSEAVG--PGF-----IFERLYKIMKDHK----NPKVLSEGILW 741 (2015)
Q Consensus 676 ~~~~~~~-~~il~~LveKlgD--~K~r~~a~~~L~~l~e~~~--~~~-----Vl~~L~~~l~~~K----npKv~~~~l~~ 741 (2015)
......+ .-++|.|+.-+.+ ..++..|..+|..++.... -+. ++..++..+.... ...+...++..
T Consensus 153 ~~~~~vv~~Gaip~Lv~LL~s~~~~v~e~A~~aL~nLa~~~~~~r~~i~~~g~i~~Ll~lL~~~~~~~~~~~~~~~a~~~ 232 (529)
T 3tpo_A 153 EQTKAVVDGGAIPAFISLLASPHAHISEQAVWALGNIAGAGSAFRDLVIKHGAIDPLLALLAVPDLSTLACGYLRNLTWT 232 (529)
T ss_dssp HHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTCHHHHHHTTCSSCGGGSCHHHHHHHHHH
T ss_pred HHHHHHHHCCCHHHHHHHHcCCCHHHHHHHHHHHHHHhccCHHHHHHHHHcCCcHHHHHHHhccchhHhHHHHHHHHHHH
Confidence 1111111 1267888876655 4688999989988875321 111 2334444442211 12233344444
Q ss_pred HHHHHHHhCCC-C-CChhhHHHHHHhcCCCCCchhHHHHHHHHHHHHHHHhChhHHhhhhhccHHHHHHHHHHHhcCCCC
Q 000156 742 MVSAVEDFGVS-H-LKLKDLIDFCKDTGLQSSAAATRNATIKLLGALHKFVGPDIKGFLADVKPALLSALDAEYEKNPFE 819 (2015)
Q Consensus 742 L~~li~~fG~~-~-l~~k~li~~l~~~gL~~sn~~VR~aA~~ll~~Ly~~~G~~l~~~L~~lkp~ll~~Le~ef~k~~~~ 819 (2015)
++.+...-... . ..+..+++.+..+ +.+.++.|+..|..+|..|...... ....+. .
T Consensus 233 L~nl~~~~~~~~~~~~~~~~lp~L~~L-L~~~~~~v~~~a~~aL~~l~~~~~~------------~~~~v~----~---- 291 (529)
T 3tpo_A 233 LSNLCRNKNPAPPLDAVEQILPTLVRL-LHHNDPEVLADSCWAISYLTDGPNE------------RIEMVV----K---- 291 (529)
T ss_dssp HHHHHCCCTTCCCHHHHHHHHHHHHHH-TTSSCHHHHHHHHHHHHHHHSSCHH------------HHHHHH----T----
T ss_pred HHHHHhcccchhhHHHHhhHHHHHHHH-hcCCcHHHHHHHHHHHHHhhhhhhh------------hHHHHH----h----
Confidence 54444311111 1 1235678888888 9999999999998888766532110 000000 0
Q ss_pred CCCCCcccccCccccCCCCCCCCCCCCCcccccccchHHHHhcCCCChHHHHHHHHHHHHHHHhccccCCCC-ChhhHHH
Q 000156 820 GTVVPKKTVRASESTSSVSSGGSDGLPREDISGKFTPTLVKSLESPDWKVRLESIEAVNKILEEANKRIQPA-GTGELFG 898 (2015)
Q Consensus 820 ~~p~p~R~~r~~~~~~s~~~~~~d~lprvdIs~~L~~~ll~~l~d~~Wk~R~eale~L~~ll~~a~~~I~~~-~~~eL~~ 898 (2015)
..+.+.++..+.+.++.++..++..|..++... ...... .-...+.
T Consensus 292 --------------------------------~g~i~~Lv~lL~~~~~~v~~~a~~aL~nl~~~~-~~~~~~i~~~g~l~ 338 (529)
T 3tpo_A 292 --------------------------------KGVVPQLVKLLGATELPIVTPALRAIGNIVTGT-DEQTQKVIDAGALA 338 (529)
T ss_dssp --------------------------------TTCHHHHHHHHTCSCHHHHHHHHHHHHHHTTSC-HHHHHHHHHTTGGG
T ss_pred --------------------------------ccchHHHHHHhcCCChhHHHHHHHHHHHHHccc-hHHHHHHhhcccHH
Confidence 003456777888899999999999999887421 100000 0123556
Q ss_pred HHHhccccchHHHHHHHHHHHHHHHHHhChhhHHh-hhHHHHHHHHHhCCCcHHHHHHHHHHHHHHHHhcCch-------
Q 000156 899 GLRGRLYDSNKNLVMATLITLGAVASAMGPAVEKS-SKGVLSDILKCLGDNKKHMRECTLTVLDAWLAAVHLD------- 970 (2015)
Q Consensus 899 ~L~~rL~DsN~~V~~~Al~~l~~La~alg~~f~~~-~~~llp~ll~~L~D~k~~Vr~aa~~aL~~i~~~~gl~------- 970 (2015)
.|...|.+.+..++..|+.+|+.|+..-....... -..++|.++..|.+....++..|..+|..++.....+
T Consensus 339 ~L~~LL~~~~~~i~~~a~~aL~nl~~~~~~~~~~v~~~g~i~~Lv~lL~~~~~~v~~~A~~aL~nl~~~~~~~~~~~l~~ 418 (529)
T 3tpo_A 339 VFPSLLTNPKTNIQKEATWTMSNITAGRQDQIQQVVNHGLVPFLVGVLSKADFKTQKAAAWAITNYTSGGTVEQIVYLVH 418 (529)
T ss_dssp GHHHHTTCSSHHHHHHHHHHHHHHHTSCHHHHHHHHHTTHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHSCHHHHHHHHH
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHhcccHHHHHHHHhcCcHHHHHHHhcCCCHHHHHHHHHHHHHHHcCCCHHHHHHHHH
Confidence 77788888999999999999999875322222222 2358999999999999999999999999888654422
Q ss_pred -hhHHHHHHHHhcCCCChhHHHHHHHHHHHHhcc---CCCCCChhhh------HHHHHhhcCCCChHHHHHHHHHHHHH
Q 000156 971 -KMVPYVTTALTDAKLGAEGRKDLFDWLSKQLTG---LSGFPDAAHL------LKPASIAMTDKSSDVRKAAEACIVEI 1039 (2015)
Q Consensus 971 -~ll~~l~~~L~~~k~~p~~R~~~l~~L~~~l~~---~~~~~~~~~l------l~pl~~~L~D~~~~VR~aA~~~L~~l 1039 (2015)
.+++.+...|.++ ++.++..++..|...+.. .+....+..+ +..|-.+..+.|.+|++.|...+..+
T Consensus 419 ~g~i~~L~~LL~~~--d~~i~~~~L~aL~nil~~~~~~~~~~~~~~~iee~ggl~~ie~Lq~~~n~~i~~~A~~iie~y 495 (529)
T 3tpo_A 419 CGIIEPLMNLLSAK--DTKIIQVILDAISNIFQAAEKLGETEKLSIMIEECGGLDKIEALQRHENESVYKASLNLIEKY 495 (529)
T ss_dssp TTCHHHHHHGGGCS--CHHHHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHTTCHHHHTGGGGCSSHHHHHHHHHHHHHH
T ss_pred CcCHHHHHHHhcCC--CHHHHHHHHHHHHHHHHHhHhccChHHHHHHHHHCCcHHHHHHHHcCCCHHHHHHHHHHHHHH
Confidence 3567788888765 577887777777655432 2211112222 22244455788999999988777654
No 49
>3ul1_B Importin subunit alpha-2; arm repeat, armadillo repeat, nuclear transport, nuclear LOC signal binding, importin beta binding; 1.90A {Mus musculus} PDB: 3ukx_B 3uky_B 3ukz_B 3ukw_B 3ul0_B 3oqs_A 3rz9_A 3rzx_A 3uvu_A 1q1s_C 1q1t_C 3knd_A 1ejy_I 1iq1_C 1ejl_I 1pjn_B 1pjm_B 3q5u_A 3fey_C 3fex_C ...
Probab=98.52 E-value=5.3e-06 Score=107.63 Aligned_cols=376 Identities=11% Similarity=0.105 Sum_probs=233.0
Q ss_pred cHHHHhhhccCCHHHHHHHHHHHHHHHHhcc--ccch-----HHHHHHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHcC
Q 000156 603 PADTVGQLKSAVWKERLEAISSLRQQVEAVQ--NLDQ-----SVEILVRLVCMLPGWSEKNVQVQQQVIEVINYLAATAT 675 (2015)
Q Consensus 603 ~~~l~~~L~s~~Wk~Rl~a~e~L~~~v~~~~--~~~~-----~~~~Lv~~L~~~pg~~DsN~qV~~~~Le~l~~l~~~~~ 675 (2015)
-+++++.+.|.+-..++.|+..+.+++.... +.+. ....|+++|. .+.|..++..+.-+|..++....
T Consensus 59 i~~~v~~l~s~d~~~q~~a~~~~rklls~e~~ppi~~ii~~G~ip~LV~lL~-----~~~~~~lq~~Aa~aL~nias~~~ 133 (510)
T 3ul1_B 59 VEDIVKGINSNNLESQLQATQAARKLLSREKQPPIDNIIRAGLIPKFVSFLG-----KTDCSPIQFESAWALTNIASGTS 133 (510)
T ss_dssp HHHHHHHHTSSCHHHHHHHHHHHHHHHTCSSCCCHHHHHHTTHHHHHHHHTT-----CTTCHHHHHHHHHHHHHHHTSCH
T ss_pred HHHHHHHhcCCCHHHHHHHHHHHHHHhcCCCCchHHHHHHCCCHHHHHHHHC-----CCCCHHHHHHHHHHHHHHhcCCH
Confidence 3788999999999999999999998885422 1111 1234445442 24567788888888888875321
Q ss_pred CCchhHHH-HHHHHHHhhhcc--hhhhHHHHHHHHHHHhhhC--hhH-----HHHHHHHHhhhC----CChhHHHHHHHH
Q 000156 676 KFPKKCVV-LCLLGISERVAD--IKTRAHAMKCLTTFSEAVG--PGF-----IFERLYKIMKDH----KNPKVLSEGILW 741 (2015)
Q Consensus 676 ~~~~~~~~-~il~~LveKlgD--~K~r~~a~~~L~~l~e~~~--~~~-----Vl~~L~~~l~~~----KnpKv~~~~l~~ 741 (2015)
......+. -.+|.|+.-+.+ ..++..|..+|..++.... -+. .+..++..+... ....+...++..
T Consensus 134 e~~~~vv~~GaIp~Lv~lL~s~~~~v~e~A~~aL~nLa~d~~~~r~~v~~~G~i~~Ll~lL~~~~~~~~~~~~~~~a~~~ 213 (510)
T 3ul1_B 134 EQTKAVVDGGAIPAFISLLASPHAHISEQAVWALGNIAGDGSAFRDLVIKHGAIDPLLALLAVPDLSTLACGYLRNLTWT 213 (510)
T ss_dssp HHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTCHHHHHHHTCSSCGGGSCHHHHHHHHHH
T ss_pred HHHHHHHHCCCHHHHHHHHcCCCHHHHHHHHHHHHHHHhCCHHHHHHHHHcCChHHHHHHHHhccchhhhHHHHHHHHHH
Confidence 11111111 268888887765 4689999999998875321 111 233444444211 122334445555
Q ss_pred HHHHHHHhCCC-C-CChhhHHHHHHhcCCCCCchhHHHHHHHHHHHHHHHhChhHHhhhhhccHHHHHHHHHHHhcCCCC
Q 000156 742 MVSAVEDFGVS-H-LKLKDLIDFCKDTGLQSSAAATRNATIKLLGALHKFVGPDIKGFLADVKPALLSALDAEYEKNPFE 819 (2015)
Q Consensus 742 L~~li~~fG~~-~-l~~k~li~~l~~~gL~~sn~~VR~aA~~ll~~Ly~~~G~~l~~~L~~lkp~ll~~Le~ef~k~~~~ 819 (2015)
++.+...-... . ..+..+++.+..+ +.+.++.|+..|..+|..|..... .....+. .
T Consensus 214 L~nl~~~~~~~~~~~~~~~~lp~L~~L-L~~~~~~v~~~A~~aL~~L~~~~~------------~~~~~i~----~---- 272 (510)
T 3ul1_B 214 LSNLCRNKNPAPPLDAVEQILPTLVRL-LHHNDPEVLADSCWAISYLTDGPN------------ERIEMVV----K---- 272 (510)
T ss_dssp HHHHHCCCSSCCCHHHHHHHHHHHHHH-TTCSCHHHHHHHHHHHHHHTSSCH------------HHHHHHH----T----
T ss_pred HHHHhhcccchhHHHHHHhHHHHHHHH-HhcCCHHHHHHHHHHHHHHhhchh------------hhHHHHH----h----
Confidence 55554321111 1 1235688888888 999999999999988876642111 0000000 0
Q ss_pred CCCCCcccccCccccCCCCCCCCCCCCCcccccccchHHHHhcCCCChHHHHHHHHHHHHHHHhccccCCCCC-hhhHHH
Q 000156 820 GTVVPKKTVRASESTSSVSSGGSDGLPREDISGKFTPTLVKSLESPDWKVRLESIEAVNKILEEANKRIQPAG-TGELFG 898 (2015)
Q Consensus 820 ~~p~p~R~~r~~~~~~s~~~~~~d~lprvdIs~~L~~~ll~~l~d~~Wk~R~eale~L~~ll~~a~~~I~~~~-~~eL~~ 898 (2015)
..+.+.++..+.+.++.++..++..|..++... ....... -...+.
T Consensus 273 --------------------------------~g~i~~Lv~lL~~~~~~v~~~al~aL~nl~~~~-~~~~~~i~~~g~l~ 319 (510)
T 3ul1_B 273 --------------------------------KGVVPQLVKLLGATELPIVTPALRAIGNIVTGT-DEQTQKVIDAGALA 319 (510)
T ss_dssp --------------------------------TTCHHHHHHHHTCSCHHHHHHHHHHHHHHTTSC-HHHHHHHHHTTGGG
T ss_pred --------------------------------cccchhhhhhhcCCChhhhhHHHHHHHHhhcCC-HHHHHHHhhccchH
Confidence 013456778888999999999999999886421 0000000 023455
Q ss_pred HHHhccccchHHHHHHHHHHHHHHHHHhChhhHHh-hhHHHHHHHHHhCCCcHHHHHHHHHHHHHHHHhcCc--------
Q 000156 899 GLRGRLYDSNKNLVMATLITLGAVASAMGPAVEKS-SKGVLSDILKCLGDNKKHMRECTLTVLDAWLAAVHL-------- 969 (2015)
Q Consensus 899 ~L~~rL~DsN~~V~~~Al~~l~~La~alg~~f~~~-~~~llp~ll~~L~D~k~~Vr~aa~~aL~~i~~~~gl-------- 969 (2015)
.|...|.+.+..++..|+.+++.|+..-....... -..++|.++..|.+....+|..|..+|..+......
T Consensus 320 ~L~~LL~~~~~~v~~~A~~aL~nl~a~~~~~~~~v~~~g~i~~Lv~lL~~~~~~v~~~Aa~aL~Nl~~~~~~~~~~~L~~ 399 (510)
T 3ul1_B 320 VFPSLLTNPKTNIQKEATWTMSNITAGRQDQIQQVVNHGLVPFLVGVLSKADFKTQKEAAWAITNYTSGGTVEQIVYLVH 399 (510)
T ss_dssp GCC-CTTCSSHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHCCHHHHHHHHH
T ss_pred HHHHHhcCCCHHHHHHHHHHHHHHHcCcHHHHHHHHhcCCHHHHHHHHcCCCHHHHHHHHHHHHHHHccCCHHHHHHHHH
Confidence 66777889999999999999999874322222222 235889999999999999999999999988875442
Q ss_pred hhhHHHHHHHHhcCCCChhHHHHHHHHHHHHhcc---CCCCCChhhhH------HHHHhhcCCCChHHHHHHHHHHHHH
Q 000156 970 DKMVPYVTTALTDAKLGAEGRKDLFDWLSKQLTG---LSGFPDAAHLL------KPASIAMTDKSSDVRKAAEACIVEI 1039 (2015)
Q Consensus 970 ~~ll~~l~~~L~~~k~~p~~R~~~l~~L~~~l~~---~~~~~~~~~ll------~pl~~~L~D~~~~VR~aA~~~L~~l 1039 (2015)
..+++.+...|.++ ++.++..++..|...+.. .+....+..++ ..|-.+..+.|.+|++.|...+..+
T Consensus 400 ~g~i~~L~~LL~~~--d~~i~~~~L~aL~nil~~~~~~~~~~~~~~~iee~ggl~~ie~Lq~~~n~~i~~~A~~iie~y 476 (510)
T 3ul1_B 400 CGIIEPLMNLLSAK--DTKIIQVILDAISNIFQAAEKLGETEKLSIMIEECGGLDKIEALQRHENESVYKASLNLIEKY 476 (510)
T ss_dssp TTCHHHHHHGGGCS--CHHHHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHTTHHHHHHHGGGCSSHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHhcCC--CHHHHHHHHHHHHHHHHHhHhccchHHHHHHHHHcCcHHHHHHHHcCCCHHHHHHHHHHHHHH
Confidence 23567788888765 577888777776655532 22111122222 2233445788999999888776544
No 50
>2vgl_A Adaptor protein complex AP-2, alpha 2 subunit; cytoplasmic vesicle, alternative splicing, endocytosis, lipid-binding, golgi apparatus, adaptor, membrane, transport; HET: IHP; 2.59A {Rattus norvegicus} PDB: 2xa7_A 2jkr_A 2jkt_A
Probab=98.51 E-value=0.0002 Score=94.89 Aligned_cols=241 Identities=11% Similarity=0.054 Sum_probs=148.6
Q ss_pred hHHHHHHHHHHHHHHHhCCCCCChhhHHHHHHhcCCCCCchhHHHHHHHHHHHHHHHhChhHHhhhhhccHHHHHHHHHH
Q 000156 733 KVLSEGILWMVSAVEDFGVSHLKLKDLIDFCKDTGLQSSAAATRNATIKLLGALHKFVGPDIKGFLADVKPALLSALDAE 812 (2015)
Q Consensus 733 Kv~~~~l~~L~~li~~fG~~~l~~k~li~~l~~~gL~~sn~~VR~aA~~ll~~Ly~~~G~~l~~~L~~lkp~ll~~Le~e 812 (2015)
-|..+|+..+..+ +...--.+..+..+..+ +.++++++|-.|...+..+....+. . .+
T Consensus 308 aVl~ea~~~i~~l----~~~~~~~~~~~~~L~~~-L~~~~~niry~aL~~l~~l~~~~~~-~-~~--------------- 365 (621)
T 2vgl_A 308 AVLFEAISLIIHH----DSEPNLLVRACNQLGQF-LQHRETNLRYLALESMCTLASSEFS-H-EA--------------- 365 (621)
T ss_dssp HHHHHHHHHHHHH----CCCHHHHHHHHHHHHHH-SSCSCHHHHHHHHHHHHHHTTCTTT-H-HH---------------
T ss_pred HHHHHHHHHHHhc----CCcHHHHHHHHHHHHHH-hcCCCcchHHHHHHHHHHHHhccCc-H-HH---------------
Confidence 5666666655443 22110123455666677 8888999999999888776432210 0 00
Q ss_pred HhcCCCCCCCCCcccccCccccCCCCCCCCCCCCCcccccccchHHHHhcC-CCChHHHHHHHHHHHHHHHhccccCCCC
Q 000156 813 YEKNPFEGTVVPKKTVRASESTSSVSSGGSDGLPREDISGKFTPTLVKSLE-SPDWKVRLESIEAVNKILEEANKRIQPA 891 (2015)
Q Consensus 813 f~k~~~~~~p~p~R~~r~~~~~~s~~~~~~d~lprvdIs~~L~~~ll~~l~-d~~Wk~R~eale~L~~ll~~a~~~I~~~ 891 (2015)
+ ......++..+. |.+-.+|..+++.+..++.+.
T Consensus 366 ~--------------------------------------~~~~~~i~~~L~~d~d~~Ir~~aL~lL~~l~~~~------- 400 (621)
T 2vgl_A 366 V--------------------------------------KTHIETVINALKTERDVSVRQRAVDLLYAMCDRS------- 400 (621)
T ss_dssp H--------------------------------------HTTHHHHHHHHTTCCCHHHHHHHHHHHHHHCCHH-------
T ss_pred H--------------------------------------HHHHHHHHHHhccCCCHhHHHHHHHHHHHHcChh-------
Confidence 0 011235666677 888889999999999887643
Q ss_pred ChhhHHHHHHhccccchHHHHHHHHHHHHHHHHHhChhhHHhhhHHHHHHHHHhCCCcHHHHHHHHHHHHHHHHhcC-c-
Q 000156 892 GTGELFGGLRGRLYDSNKNLVMATLITLGAVASAMGPAVEKSSKGVLSDILKCLGDNKKHMRECTLTVLDAWLAAVH-L- 969 (2015)
Q Consensus 892 ~~~eL~~~L~~rL~DsN~~V~~~Al~~l~~La~alg~~f~~~~~~llp~ll~~L~D~k~~Vr~aa~~aL~~i~~~~g-l- 969 (2015)
...+++..|...+.+.+..++..++..|+.+|....+.+..|+..++ +.+.+....+...+...+..++...+ +
T Consensus 401 Nv~~Iv~eL~~yl~~~d~~~~~~~v~~I~~la~k~~~~~~~~v~~Ll----~ll~~~~~~v~~ev~~~l~~ii~~~~~~~ 476 (621)
T 2vgl_A 401 NAQQIVAEMLSYLETADYSIREEIVLKVAILAEKYAVDYTWYVDTIL----NLIRIAGDYVSEEVWYRVIQIVINRDDVQ 476 (621)
T ss_dssp HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCSSTHHHHHHHH----HHHHHHGGGSCSHHHHHHHHHHGGGCSCH
T ss_pred hHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhcCCcHHHHHHHHH----HHHHhhcccchHHHHHHHHHHHhCChhHH
Confidence 25788888888888888999999999999999888777776665544 33333333355555555555554443 2
Q ss_pred hhhHHHHHHHHhcCCCChhHHHHHHHHHHHHhcc-CCCCCC--hhhhHHHHHhhcCCCChHHHHHHHHHHHHHHHHcCh
Q 000156 970 DKMVPYVTTALTDAKLGAEGRKDLFDWLSKQLTG-LSGFPD--AAHLLKPASIAMTDKSSDVRKAAEACIVEILRAGGQ 1045 (2015)
Q Consensus 970 ~~ll~~l~~~L~~~k~~p~~R~~~l~~L~~~l~~-~~~~~~--~~~ll~pl~~~L~D~~~~VR~aA~~~L~~l~~~~G~ 1045 (2015)
...+..+.+.+.++... ..=..+..|+.--+.. ....+. ..+.+..+...+.+.++.||..+-.++..+....++
T Consensus 477 ~~~~~~l~~~l~~~~~~-~~li~~~~wilGEy~~~~~~~~~~~p~~~l~~l~~~~~~~~~~v~~~~Lta~~Kl~~~~p~ 554 (621)
T 2vgl_A 477 GYAAKTVFEALQAPACH-ENLVKVGGYILGEFGNLIAGDPRSSPLIQFNLLHSKFHLCSVPTRALLLSTYIKFVNLFPE 554 (621)
T ss_dssp HHHHHHHHHHHTSSSCC-HHHHHHHHHHHHHHTHHHHSSTTSCHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHCGG
T ss_pred HHHHHHHHHHHcCccch-HHHHHHHHHHhcchHHHhcccCCCCHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHChH
Confidence 22345566777654311 1111233465332221 111111 134566677788899999999999999988777654
No 51
>3ul1_B Importin subunit alpha-2; arm repeat, armadillo repeat, nuclear transport, nuclear LOC signal binding, importin beta binding; 1.90A {Mus musculus} PDB: 3ukx_B 3uky_B 3ukz_B 3ukw_B 3ul0_B 3oqs_A 3rz9_A 3rzx_A 3uvu_A 1q1s_C 1q1t_C 3knd_A 1ejy_I 1iq1_C 1ejl_I 1pjn_B 1pjm_B 3q5u_A 3fey_C 3fex_C ...
Probab=98.51 E-value=1.6e-05 Score=102.99 Aligned_cols=380 Identities=12% Similarity=0.118 Sum_probs=238.7
Q ss_pred hhhhhhhccCChHHHHHHHHHHHHHhcCCCCCC-CCh--HHHHHHHHHHhc-ccCHHHHHHHHHHHHHHHHHhhhcchhh
Q 000156 288 SGFWEGVKATKWSERKDAVAELTKLASTKRIAP-GDF--TEVCRTLKKLIT-DVNIAVAVEAIQAIGNLARGLRTHFSGS 363 (2015)
Q Consensus 288 ~~f~~~l~s~kWkeR~eaL~~L~~l~~~~ki~~-~~y--~~l~~~L~k~l~-D~N~~V~~~A~~~l~~La~~L~~~f~~~ 363 (2015)
+++.+.+.+.+-..+.+|+..++++++..+-.+ ... ..+++.|...|+ +.+..+...|+.+|..||.+-...-...
T Consensus 60 ~~~v~~l~s~d~~~q~~a~~~~rklls~e~~ppi~~ii~~G~ip~LV~lL~~~~~~~lq~~Aa~aL~nias~~~e~~~~v 139 (510)
T 3ul1_B 60 EDIVKGINSNNLESQLQATQAARKLLSREKQPPIDNIIRAGLIPKFVSFLGKTDCSPIQFESAWALTNIASGTSEQTKAV 139 (510)
T ss_dssp HHHHHHHTSSCHHHHHHHHHHHHHHHTCSSCCCHHHHHHTTHHHHHHHHTTCTTCHHHHHHHHHHHHHHHTSCHHHHHHH
T ss_pred HHHHHHhcCCCHHHHHHHHHHHHHHhcCCCCchHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHhcCCHHHHHHH
Confidence 467888999999999999999999885322211 000 135778888887 6678899999999999996533222222
Q ss_pred hH-hHHHHHHHHhccCcHHHHHHHHHHHHHHHHhcCCChH------hHHHHHHHHhhcCC-----hHHHHHHHHHHHHHH
Q 000156 364 SR-FLLPVLLEKLKEKKPTVAESLTQTLQAMHKAGCLNLV------DVVEDVKTSVKNKV-----PLVRSLTLNWVTFCI 431 (2015)
Q Consensus 364 ~~-~llp~LL~klkdkk~~V~~aa~~aL~al~~~~~~~l~------~il~~l~~~L~~Kn-----p~vR~~~l~~L~~~l 431 (2015)
+. ..+|.|+..+++....|++.+..||..+... +.... ..++.+...+...+ ..+...++..+..+.
T Consensus 140 v~~GaIp~Lv~lL~s~~~~v~e~A~~aL~nLa~d-~~~~r~~v~~~G~i~~Ll~lL~~~~~~~~~~~~~~~a~~~L~nl~ 218 (510)
T 3ul1_B 140 VDGGAIPAFISLLASPHAHISEQAVWALGNIAGD-GSAFRDLVIKHGAIDPLLALLAVPDLSTLACGYLRNLTWTLSNLC 218 (510)
T ss_dssp HHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHHTT-CHHHHHHHHHTTCHHHHHHHTCSSCGGGSCHHHHHHHHHHHHHHH
T ss_pred HHCCCHHHHHHHHcCCCHHHHHHHHHHHHHHHhC-CHHHHHHHHHcCChHHHHHHHHhccchhhhHHHHHHHHHHHHHHh
Confidence 22 4799999999999999999999999998754 11111 23556666666433 234444444444443
Q ss_pred HhcChhHHHHhhhhHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhCchHHHHHHHhccHHHHHHHHHHHhcCCCCCCCCC
Q 000156 432 ETSSKAAVLKVHKDYVPICMECLNDGTPEVRDAAFSVLAAIAKSVGMRPLERSIEKLDDVRRNKLSEMIAGSGGDVATGT 511 (2015)
Q Consensus 432 ~~~~~~~l~~~l~~l~p~l~k~L~Ds~~~VR~aA~~al~~l~~~~Ge~~~~~~l~~Ld~~~~kkI~e~~~~~~~~~~~~~ 511 (2015)
.......-......++|.|.+++.+.+++|+..|..+|..+... .. .....+ ...
T Consensus 219 ~~~~~~~~~~~~~~~lp~L~~LL~~~~~~v~~~A~~aL~~L~~~--~~-----------~~~~~i---~~~--------- 273 (510)
T 3ul1_B 219 RNKNPAPPLDAVEQILPTLVRLLHHNDPEVLADSCWAISYLTDG--PN-----------ERIEMV---VKK--------- 273 (510)
T ss_dssp CCCSSCCCHHHHHHHHHHHHHHTTCSCHHHHHHHHHHHHHHTSS--CH-----------HHHHHH---HTT---------
T ss_pred hcccchhHHHHHHhHHHHHHHHHhcCCHHHHHHHHHHHHHHhhc--hh-----------hhHHHH---Hhc---------
Confidence 32221111123467899999999999999999988888655421 11 000111 000
Q ss_pred CCccccCCCCCCCCCCCCcccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcCCCCCCCCCCCCCCCCCH
Q 000156 512 SSARVQTSGGSVPSVEASESSFVRKSAASMLSGKRPVSAAPASKKGGPVKPSAKKDGSGKQETSKLTEAPEDVEPSEMSL 591 (2015)
Q Consensus 512 ~~~~~~~~~~s~~~~~~~~~~~~~~~~~s~~~~~~P~~~~~~~~k~~~~k~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~ 591 (2015)
T Consensus 274 -------------------------------------------------------------------------------- 273 (510)
T 3ul1_B 274 -------------------------------------------------------------------------------- 273 (510)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHhhccCcHHHHhhhccCCHHHHHHHHHHHHHHHHhccccchHHHHHHH--HHhc-CCCCcccHHHHHHHHHHHHH
Q 000156 592 EEIESRLGSLIPADTVGQLKSAVWKERLEAISSLRQQVEAVQNLDQSVEILVR--LVCM-LPGWSEKNVQVQQQVIEVIN 668 (2015)
Q Consensus 592 ee~e~~~~~ll~~~l~~~L~s~~Wk~Rl~a~e~L~~~v~~~~~~~~~~~~Lv~--~L~~-~pg~~DsN~qV~~~~Le~l~ 668 (2015)
-+.+.++..|.+.++..+..++..|..++...+. ..+.++. .+.. ..-+.+.+..|+..++-+|.
T Consensus 274 ---------g~i~~Lv~lL~~~~~~v~~~al~aL~nl~~~~~~---~~~~i~~~g~l~~L~~LL~~~~~~v~~~A~~aL~ 341 (510)
T 3ul1_B 274 ---------GVVPQLVKLLGATELPIVTPALRAIGNIVTGTDE---QTQKVIDAGALAVFPSLLTNPKTNIQKEATWTMS 341 (510)
T ss_dssp ---------TCHHHHHHHHTCSCHHHHHHHHHHHHHHTTSCHH---HHHHHHHTTGGGGCC-CTTCSSHHHHHHHHHHHH
T ss_pred ---------ccchhhhhhhcCCChhhhhHHHHHHHHhhcCCHH---HHHHHhhccchHHHHHHhcCCCHHHHHHHHHHHH
Confidence 0013456677888888899998888877644221 1222222 1100 01246677788888888887
Q ss_pred HHHHHcCCCchhHH-HHHHHHHHhhhc--chhhhHHHHHHHHHHHhhhChhH--------HHHHHHHHhhhCCChhHHHH
Q 000156 669 YLAATATKFPKKCV-VLCLLGISERVA--DIKTRAHAMKCLTTFSEAVGPGF--------IFERLYKIMKDHKNPKVLSE 737 (2015)
Q Consensus 669 ~l~~~~~~~~~~~~-~~il~~LveKlg--D~K~r~~a~~~L~~l~e~~~~~~--------Vl~~L~~~l~~~KnpKv~~~ 737 (2015)
.++........... ..++|.|+.-+. +.++|..|..+|..++....++. +++.|+..+ ..++++++..
T Consensus 342 nl~a~~~~~~~~v~~~g~i~~Lv~lL~~~~~~v~~~Aa~aL~Nl~~~~~~~~~~~L~~~g~i~~L~~LL-~~~d~~i~~~ 420 (510)
T 3ul1_B 342 NITAGRQDQIQQVVNHGLVPFLVGVLSKADFKTQKEAAWAITNYTSGGTVEQIVYLVHCGIIEPLMNLL-SAKDTKIIQV 420 (510)
T ss_dssp HHTTSCHHHHHHHHHTTHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHCCHHHHHHHHHTTCHHHHHHGG-GCSCHHHHHH
T ss_pred HHHcCcHHHHHHHHhcCCHHHHHHHHcCCCHHHHHHHHHHHHHHHccCCHHHHHHHHHCCCHHHHHHHh-cCCCHHHHHH
Confidence 77642111011111 235677777654 45788888889988887555443 245555554 7889999999
Q ss_pred HHHHHHHHHHHhCCCC-C-Chh------hHHHHHHhcCCCCCchhHHHHHHHHHHHHH
Q 000156 738 GILWMVSAVEDFGVSH-L-KLK------DLIDFCKDTGLQSSAAATRNATIKLLGALH 787 (2015)
Q Consensus 738 ~l~~L~~li~~fG~~~-l-~~k------~li~~l~~~gL~~sn~~VR~aA~~ll~~Ly 787 (2015)
++..|.+++....... . ... ..++.+..+ ..|.|..|++.|..++-..|
T Consensus 421 ~L~aL~nil~~~~~~~~~~~~~~~iee~ggl~~ie~L-q~~~n~~i~~~A~~iie~yf 477 (510)
T 3ul1_B 421 ILDAISNIFQAAEKLGETEKLSIMIEECGGLDKIEAL-QRHENESVYKASLNLIEKYF 477 (510)
T ss_dssp HHHHHHHHHHHHHTTTCHHHHHHHHHHTTHHHHHHHG-GGCSSHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHhHhccchHHHHHHHHHcCcHHHHHHH-HcCCCHHHHHHHHHHHHHHC
Confidence 9999998886321110 0 011 134556666 78899999999999875444
No 52
>3tpo_A Importin subunit alpha-2; nuclear import, protein transport; 2.10A {Mus musculus} PDB: 1qgk_B 1qgr_B
Probab=98.46 E-value=2.7e-05 Score=101.46 Aligned_cols=377 Identities=12% Similarity=0.117 Sum_probs=235.0
Q ss_pred hhhhhhhccCChHHHHHHHHHHHHHhcCCCCCCCC---hHHHHHHHHHHhc-ccCHHHHHHHHHHHHHHHHHhhhcchhh
Q 000156 288 SGFWEGVKATKWSERKDAVAELTKLASTKRIAPGD---FTEVCRTLKKLIT-DVNIAVAVEAIQAIGNLARGLRTHFSGS 363 (2015)
Q Consensus 288 ~~f~~~l~s~kWkeR~eaL~~L~~l~~~~ki~~~~---y~~l~~~L~k~l~-D~N~~V~~~A~~~l~~La~~L~~~f~~~ 363 (2015)
+++.+.+.+.+-..+.+|+..++++++..+-.+-+ -..+++.|.+.+. +.+..+...|+.+|..|+.+-...-...
T Consensus 79 ~~lv~~l~s~d~~~q~~a~~~~rklLs~~~~~~i~~ii~~G~ip~Lv~lL~~~~~~~~q~~Aa~aL~nia~~~~~~~~~v 158 (529)
T 3tpo_A 79 EDIVKGINSNNLESQLQATQAARKLLSREKQPPIDNIIRAGLIPKFVSFLGKTDCSPIQFESAWALTNIASGTSEQTKAV 158 (529)
T ss_dssp HHHHHHHTSSCHHHHHHHHHHHHHHHTSSSCCCHHHHHHTTHHHHHHHHHTCTTCHHHHHHHHHHHHHHHTSCHHHHHHH
T ss_pred HHHHHHhcCCCHHHHHHHHHHHHHHHcCCCCchHHHHHHCCCHHHHHHHHcCCCCHHHHHHHHHHHHHHHcCCHHHHHHH
Confidence 36788889999999999999999987532222210 1236677888887 6778899999999999997543221112
Q ss_pred -hHhHHHHHHHHhccCcHHHHHHHHHHHHHHHHhcCCChH------hHHHHHHHHhhcCC-----hHHHHHHHHHHHHHH
Q 000156 364 -SRFLLPVLLEKLKEKKPTVAESLTQTLQAMHKAGCLNLV------DVVEDVKTSVKNKV-----PLVRSLTLNWVTFCI 431 (2015)
Q Consensus 364 -~~~llp~LL~klkdkk~~V~~aa~~aL~al~~~~~~~l~------~il~~l~~~L~~Kn-----p~vR~~~l~~L~~~l 431 (2015)
-...+|.|+..+.+....|++.+..||..+... +.... ..++.++..+...+ ..+...++..|..+.
T Consensus 159 v~~Gaip~Lv~LL~s~~~~v~e~A~~aL~nLa~~-~~~~r~~i~~~g~i~~Ll~lL~~~~~~~~~~~~~~~a~~~L~nl~ 237 (529)
T 3tpo_A 159 VDGGAIPAFISLLASPHAHISEQAVWALGNIAGA-GSAFRDLVIKHGAIDPLLALLAVPDLSTLACGYLRNLTWTLSNLC 237 (529)
T ss_dssp HHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHHTT-CHHHHHHHHHTTCHHHHHHTTCSSCGGGSCHHHHHHHHHHHHHHH
T ss_pred HHCCCHHHHHHHHcCCCHHHHHHHHHHHHHHhcc-CHHHHHHHHHcCCcHHHHHHHhccchhHhHHHHHHHHHHHHHHHH
Confidence 225789999999999999999999999998754 11111 23556666665433 233444444444433
Q ss_pred HhcChhHHHHhhhhHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhCchHHHHHHHhccHHHHHHHHHHHhcCCCCCCCCC
Q 000156 432 ETSSKAAVLKVHKDYVPICMECLNDGTPEVRDAAFSVLAAIAKSVGMRPLERSIEKLDDVRRNKLSEMIAGSGGDVATGT 511 (2015)
Q Consensus 432 ~~~~~~~l~~~l~~l~p~l~k~L~Ds~~~VR~aA~~al~~l~~~~Ge~~~~~~l~~Ld~~~~kkI~e~~~~~~~~~~~~~ 511 (2015)
.......-......++|.|.+++.+.+++|+..|+.+|..+... ... ....+ +..
T Consensus 238 ~~~~~~~~~~~~~~~lp~L~~LL~~~~~~v~~~a~~aL~~l~~~--~~~-----------~~~~v---~~~--------- 292 (529)
T 3tpo_A 238 RNKNPAPPLDAVEQILPTLVRLLHHNDPEVLADSCWAISYLTDG--PNE-----------RIEMV---VKK--------- 292 (529)
T ss_dssp CCCTTCCCHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHSS--CHH-----------HHHHH---HTT---------
T ss_pred hcccchhhHHHHhhHHHHHHHHhcCCcHHHHHHHHHHHHHhhhh--hhh-----------hHHHH---Hhc---------
Confidence 32221111123467899999999999999999888777655421 110 00111 000
Q ss_pred CCccccCCCCCCCCCCCCcccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcCCCCCCCCCCCCCCCCCH
Q 000156 512 SSARVQTSGGSVPSVEASESSFVRKSAASMLSGKRPVSAAPASKKGGPVKPSAKKDGSGKQETSKLTEAPEDVEPSEMSL 591 (2015)
Q Consensus 512 ~~~~~~~~~~s~~~~~~~~~~~~~~~~~s~~~~~~P~~~~~~~~k~~~~k~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~ 591 (2015)
T Consensus 293 -------------------------------------------------------------------------------- 292 (529)
T 3tpo_A 293 -------------------------------------------------------------------------------- 292 (529)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHhhccCcHHHHhhhccCCHHHHHHHHHHHHHHHHhccccc------hHHHHHHHHHhcCCCCcccHHHHHHHHHH
Q 000156 592 EEIESRLGSLIPADTVGQLKSAVWKERLEAISSLRQQVEAVQNLD------QSVEILVRLVCMLPGWSEKNVQVQQQVIE 665 (2015)
Q Consensus 592 ee~e~~~~~ll~~~l~~~L~s~~Wk~Rl~a~e~L~~~v~~~~~~~------~~~~~Lv~~L~~~pg~~DsN~qV~~~~Le 665 (2015)
-+.+.++..|.+.++..+..++..|..++.+.+... .....|+.+| .+.+..|...++-
T Consensus 293 ---------g~i~~Lv~lL~~~~~~v~~~a~~aL~nl~~~~~~~~~~i~~~g~l~~L~~LL------~~~~~~i~~~a~~ 357 (529)
T 3tpo_A 293 ---------GVVPQLVKLLGATELPIVTPALRAIGNIVTGTDEQTQKVIDAGALAVFPSLL------TNPKTNIQKEATW 357 (529)
T ss_dssp ---------TCHHHHHHHHTCSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTGGGGHHHHT------TCSSHHHHHHHHH
T ss_pred ---------cchHHHHHHhcCCChhHHHHHHHHHHHHHccchHHHHHHhhcccHHHHHHHH------cCCCHHHHHHHHH
Confidence 001345566778888888888888887764321110 0112233333 4556678888888
Q ss_pred HHHHHHHHcCCCchhHH-HHHHHHHHhhhcc--hhhhHHHHHHHHHHHhhhChhH--------HHHHHHHHhhhCCChhH
Q 000156 666 VINYLAATATKFPKKCV-VLCLLGISERVAD--IKTRAHAMKCLTTFSEAVGPGF--------IFERLYKIMKDHKNPKV 734 (2015)
Q Consensus 666 ~l~~l~~~~~~~~~~~~-~~il~~LveKlgD--~K~r~~a~~~L~~l~e~~~~~~--------Vl~~L~~~l~~~KnpKv 734 (2015)
+|..++........... ..++|.|+.-+.+ .+++..|.-+|..++....++. +++.|+..+ ..+++++
T Consensus 358 aL~nl~~~~~~~~~~v~~~g~i~~Lv~lL~~~~~~v~~~A~~aL~nl~~~~~~~~~~~l~~~g~i~~L~~LL-~~~d~~i 436 (529)
T 3tpo_A 358 TMSNITAGRQDQIQQVVNHGLVPFLVGVLSKADFKTQKAAAWAITNYTSGGTVEQIVYLVHCGIIEPLMNLL-SAKDTKI 436 (529)
T ss_dssp HHHHHHTSCHHHHHHHHHTTHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHSCHHHHHHHHHTTCHHHHHHGG-GCSCHHH
T ss_pred HHHHHhcccHHHHHHHHhcCcHHHHHHHhcCCCHHHHHHHHHHHHHHHcCCCHHHHHHHHHCcCHHHHHHHh-cCCCHHH
Confidence 88877642111111111 2357777766554 5788888888888877555443 244555554 6889999
Q ss_pred HHHHHHHHHHHHHHhCCCC-C-Chhh------HHHHHHhcCCCCCchhHHHHHHHHHHHHH
Q 000156 735 LSEGILWMVSAVEDFGVSH-L-KLKD------LIDFCKDTGLQSSAAATRNATIKLLGALH 787 (2015)
Q Consensus 735 ~~~~l~~L~~li~~fG~~~-l-~~k~------li~~l~~~gL~~sn~~VR~aA~~ll~~Ly 787 (2015)
+..++..|.+++....... . .+.. .++.+..+ ..|.|..|++.|..++-..|
T Consensus 437 ~~~~L~aL~nil~~~~~~~~~~~~~~~iee~ggl~~ie~L-q~~~n~~i~~~A~~iie~yf 496 (529)
T 3tpo_A 437 IQVILDAISNIFQAAEKLGETEKLSIMIEECGGLDKIEAL-QRHENESVYKASLNLIEKYF 496 (529)
T ss_dssp HHHHHHHHHHHHHHHHTTTCHHHHHHHHHHTTCHHHHTGG-GGCSSHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHhHhccChHHHHHHHHHCCcHHHHHHH-HcCCCHHHHHHHHHHHHHHC
Confidence 9999999988875321110 0 1111 24455666 78899999999988875443
No 53
>3ltm_A Alpha-REP4; protein engineering, heat-like repeat, protein binding; HET: 1PE 12P; 2.15A {Synthetic}
Probab=98.45 E-value=3.6e-06 Score=95.51 Aligned_cols=182 Identities=20% Similarity=0.176 Sum_probs=138.0
Q ss_pred chHHHHhcCCCChHHHHHHHHHHHHHHHhccccCCCCChhhHHHHHHhccccchHHHHHHHHHHHHHHHHHhChhhHHhh
Q 000156 855 TPTLVKSLESPDWKVRLESIEAVNKILEEANKRIQPAGTGELFGGLRGRLYDSNKNLVMATLITLGAVASAMGPAVEKSS 934 (2015)
Q Consensus 855 ~~~ll~~l~d~~Wk~R~eale~L~~ll~~a~~~I~~~~~~eL~~~L~~rL~DsN~~V~~~Al~~l~~La~alg~~f~~~~ 934 (2015)
.+.++..+.|.+|.+|..|++.|..+-. .+.+..|...|.|.+..|+..|+.+++.+..
T Consensus 21 ~~~L~~~L~~~~~~vR~~A~~~L~~~~~-----------~~~~~~L~~~l~~~~~~vr~~a~~aL~~~~~---------- 79 (211)
T 3ltm_A 21 VEMYIKNLQDDSYYVRRAAAYALGKIGD-----------ERAVEPLIKALKDEDAWVRRAAADALGQIGD---------- 79 (211)
T ss_dssp HHHHHHHTTCSSHHHHHHHHHHHHHHCC-----------GGGHHHHHHHTTCSCHHHHHHHHHHHHHHCC----------
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHhCC-----------ccHHHHHHHHHcCCCHHHHHHHHHHHHhhCC----------
Confidence 4578888999999999999999886521 4677888889999999999999999887641
Q ss_pred hHHHHHHHHHhCCCcHHHHHHHHHHHHHHHHhcCchhhHHHHHHHHhcCCCChhHHHHHHHHHHHHhccCCCCCChhhhH
Q 000156 935 KGVLSDILKCLGDNKKHMRECTLTVLDAWLAAVHLDKMVPYVTTALTDAKLGAEGRKDLFDWLSKQLTGLSGFPDAAHLL 1014 (2015)
Q Consensus 935 ~~llp~ll~~L~D~k~~Vr~aa~~aL~~i~~~~gl~~ll~~l~~~L~~~k~~p~~R~~~l~~L~~~l~~~~~~~~~~~ll 1014 (2015)
...++.++..|.|..+.||.++..+|..+ +-...++.+...|.++ ++.+|..++..|... . ....+
T Consensus 80 ~~~~~~L~~~l~~~~~~vr~~a~~aL~~~----~~~~~~~~L~~~l~d~--~~~vr~~a~~aL~~~-~-------~~~~~ 145 (211)
T 3ltm_A 80 ERAVEPLIKALKDEDGWVRQSAAVALGQI----GDERAVEPLIKALKDE--DWFVRIAAAFALGEI-G-------DERAV 145 (211)
T ss_dssp GGGHHHHHHHTTCSSHHHHHHHHHHHHHH----CCGGGHHHHHHHTTCS--SHHHHHHHHHHHHHH-C-------CGGGH
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHh----CcHHHHHHHHHHHhCC--CHHHHHHHHHHHHHc-C-------CHHHH
Confidence 34678889999999999999999999766 4456788899999876 689999999888764 2 13456
Q ss_pred HHHHhhcCCCChHHHHHHHHHHHHHHHHcChhHHHHHhccCChHHHHHHHHHHhhcc
Q 000156 1015 KPASIAMTDKSSDVRKAAEACIVEILRAGGQETIEKNLKDIQGPALALILERIKLNG 1071 (2015)
Q Consensus 1015 ~pl~~~L~D~~~~VR~aA~~~L~~l~~~~G~~~~~~~l~~L~~~~~~~i~~~l~k~~ 1071 (2015)
..+...+.|.++.||.+|..+|..+...-..+.+...+.+=++..+......+.+.+
T Consensus 146 ~~L~~~l~d~~~~vr~~a~~aL~~~~~~~~~~~L~~~l~d~~~~vr~~A~~aL~~~~ 202 (211)
T 3ltm_A 146 EPLIKALKDEDGWVRQSAADALGEIGGERVRAAMEKLAETGTGFARKVAVNYLETHK 202 (211)
T ss_dssp HHHHHHTTCSSHHHHHHHHHHHHHHCSHHHHHHHHHHHHHCCHHHHHHHHHHHHC--
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHhCchhHHHHHHHHHhCCCHHHHHHHHHHHHhcC
Confidence 778889999999999999999987732111223444444445555665566665543
No 54
>3ltj_A Alpharep-4; protein engineering, heat-like repeat, protein binding; 1.80A {Synthetic}
Probab=98.44 E-value=4.4e-06 Score=94.00 Aligned_cols=181 Identities=20% Similarity=0.169 Sum_probs=135.7
Q ss_pred cchHHHHhcCCCChHHHHHHHHHHHHHHHhccccCCCCChhhHHHHHHhccccchHHHHHHHHHHHHHHHHHhChhhHHh
Q 000156 854 FTPTLVKSLESPDWKVRLESIEAVNKILEEANKRIQPAGTGELFGGLRGRLYDSNKNLVMATLITLGAVASAMGPAVEKS 933 (2015)
Q Consensus 854 L~~~ll~~l~d~~Wk~R~eale~L~~ll~~a~~~I~~~~~~eL~~~L~~rL~DsN~~V~~~Al~~l~~La~alg~~f~~~ 933 (2015)
..+.+++.+.|.+|.+|..|++.|..+-. .+.+..|...|.|.+..|+..|+..++.+. .
T Consensus 15 ~~~~~i~~L~~~~~~vr~~A~~~L~~~~~-----------~~~~~~L~~~l~~~~~~vr~~a~~~L~~~~----~----- 74 (201)
T 3ltj_A 15 KVEMYIKNLQDDSYYVRRAAAYALGKIGD-----------ERAVEPLIKALKDEDAWVRRAAADALGQIG----D----- 74 (201)
T ss_dssp HHHHHHHHTTCSCHHHHHHHHHHHHHHCC-----------GGGHHHHHHHTTCSSHHHHHHHHHHHHHHC----C-----
T ss_pred chHHHHHHhcCCCHHHHHHHHHHHHhcCC-----------hhHHHHHHHHHcCCCHHHHHHHHHHHHhhC----C-----
Confidence 44678999999999999999999886421 356788888889999999999999988763 1
Q ss_pred hhHHHHHHHHHhCCCcHHHHHHHHHHHHHHHHhcCchhhHHHHHHHHhcCCCChhHHHHHHHHHHHHhccCCCCCChhhh
Q 000156 934 SKGVLSDILKCLGDNKKHMRECTLTVLDAWLAAVHLDKMVPYVTTALTDAKLGAEGRKDLFDWLSKQLTGLSGFPDAAHL 1013 (2015)
Q Consensus 934 ~~~llp~ll~~L~D~k~~Vr~aa~~aL~~i~~~~gl~~ll~~l~~~L~~~k~~p~~R~~~l~~L~~~l~~~~~~~~~~~l 1013 (2015)
...++.++..|.|..+.||..|..+|..+ +-...++.+...|.++ ++.+|..++..|... . ....
T Consensus 75 -~~~~~~L~~~l~d~~~~vr~~a~~aL~~~----~~~~~~~~L~~~l~d~--~~~vr~~a~~aL~~~-~-------~~~~ 139 (201)
T 3ltj_A 75 -ERAVEPLIKALKDEDGWVRQSAAVALGQI----GDERAVEPLIKALKDE--DWFVRIAAAFALGEI-G-------DERA 139 (201)
T ss_dssp -GGGHHHHHHHTTCSSHHHHHHHHHHHHHH----CCGGGHHHHHHHTTCS--SHHHHHHHHHHHHHH-T-------CGGG
T ss_pred -HHHHHHHHHHHcCCCHHHHHHHHHHHHHh----CcHHHHHHHHHHHcCC--CHHHHHHHHHHHHHh-C-------CHHH
Confidence 24678889999999999999999999775 4456788899999876 689999999888764 2 1356
Q ss_pred HHHHHhhcCCCChHHHHHHHHHHHHHHHHcChhHHHHHhccCChHHHHHHHHHHhh
Q 000156 1014 LKPASIAMTDKSSDVRKAAEACIVEILRAGGQETIEKNLKDIQGPALALILERIKL 1069 (2015)
Q Consensus 1014 l~pl~~~L~D~~~~VR~aA~~~L~~l~~~~G~~~~~~~l~~L~~~~~~~i~~~l~k 1069 (2015)
+..+..++.|.++.||..|..+|..+-..-....+...+.+=++..+......+.+
T Consensus 140 ~~~L~~~l~d~~~~vr~~A~~aL~~~~~~~~~~~L~~~l~d~~~~vr~~A~~aL~~ 195 (201)
T 3ltj_A 140 VEPLIKALKDEDGWVRQSAADALGEIGGERVRAAMEKLAETGTGFARKVAVNYLET 195 (201)
T ss_dssp HHHHHHHTTCSSHHHHHHHHHHHHHHCSHHHHHHHHHHHHHCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHhCchhHHHHHHHHHhCCCHHHHHHHHHHHHH
Confidence 67788999999999999999999877211111223333333344445544555544
No 55
>3m1i_C Exportin-1; heat repeat, GTP-binding, nucleotide-binding, NUCL protein transport, transport, cytoplasm, GTPase activation; HET: GTP; 2.00A {Saccharomyces cerevisiae} PDB: 2l1l_B
Probab=98.41 E-value=0.036 Score=78.05 Aligned_cols=534 Identities=10% Similarity=0.079 Sum_probs=267.4
Q ss_pred hHHHHHHHHHHhc-ccCHHHHHHHHHHHHHHHHHhhhcchhhhHhHHHHHHHHhccCcHHHHHHHHHHHHHHHHhcCCC-
Q 000156 323 FTEVCRTLKKLIT-DVNIAVAVEAIQAIGNLARGLRTHFSGSSRFLLPVLLEKLKEKKPTVAESLTQTLQAMHKAGCLN- 400 (2015)
Q Consensus 323 y~~l~~~L~k~l~-D~N~~V~~~A~~~l~~La~~L~~~f~~~~~~llp~LL~klkdkk~~V~~aa~~aL~al~~~~~~~- 400 (2015)
+..++..+...+. ..+..++..+++|+..+..-....+ -.-..+++.+++.+-. .+.++.++.+|+..++......
T Consensus 192 ~~~i~~~~~~~l~~~~~~~~~~~aL~~l~~~l~wi~~~~-~~~~~ll~~l~~~~l~-~~~~~~~a~~~L~~i~~~~~~~~ 269 (1049)
T 3m1i_C 192 FEQIFKLCFQVLEQGSSSSLIVATLESLLRYLHWIPYRY-IYETNILELLSTKFMT-SPDTRAITLKCLTEVSNLKIPQD 269 (1049)
T ss_dssp HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHTTTSCTHH-HHSSSHHHHHHTHHHH-SHHHHHHHHHHHHHHHHCCCCTT
T ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhhCCHHH-HhhhhHHHHHHHHhCC-CHhHHHHHHHHHHHHHhCCCCcc
Confidence 4556666667666 4467788888888877654222111 0112356666644432 6789999999999998752111
Q ss_pred -------hHhHHHHHHHHhhc------------------CChHHHHHHHHHHHHHHHhcCh-----hHHHHhhhhHHHHH
Q 000156 401 -------LVDVVEDVKTSVKN------------------KVPLVRSLTLNWVTFCIETSSK-----AAVLKVHKDYVPIC 450 (2015)
Q Consensus 401 -------l~~il~~l~~~L~~------------------Knp~vR~~~l~~L~~~l~~~~~-----~~l~~~l~~l~p~l 450 (2015)
+..+++.++..++. .........+.++..+++.+.. ..+...+..+++.+
T Consensus 270 ~~~~~~~~~~l~~~~l~~l~~si~p~~~~l~~~~~~~~~~d~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~l 349 (1049)
T 3m1i_C 270 NDLIKRQTVLFFQNTLQQIATSVMPVTADLKATYANANGNDQSFLQDLAMFLTTYLARNRALLESDESLRELLLNAHQYL 349 (1049)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHTCCTTSCHHHHHHHTCTTHHHHHHHHHHHHHHHHHHHHHHHHSCGGGHHHHHHHHHHH
T ss_pred hhhHHHHHHHHHHHHHHHHHHhhCCCcccHHHHhccCCcchHHHHHHHHHHHHHHHHHHHHHHcCChhhHHHHHHHHHHH
Confidence 11222333332221 1223333455555444432211 11234567788889
Q ss_pred HHHhcCCCHHHHHHHHHHHHHHHHHh----C-chHHHHHHHhccHHHHHHHHHHHhcCCCCCCCCCCCccccCCCCCCCC
Q 000156 451 MECLNDGTPEVRDAAFSVLAAIAKSV----G-MRPLERSIEKLDDVRRNKLSEMIAGSGGDVATGTSSARVQTSGGSVPS 525 (2015)
Q Consensus 451 ~k~L~Ds~~~VR~aA~~al~~l~~~~----G-e~~~~~~l~~Ld~~~~kkI~e~~~~~~~~~~~~~~~~~~~~~~~s~~~ 525 (2015)
..+....+.+|+..+.+....+...+ . ...+.+++..|-+ -++.+..-
T Consensus 350 l~~~~~~d~~v~~~~lefw~~l~~~l~~~~~~~~~~~~~l~~Lv~-------~ll~~m~~-------------------- 402 (1049)
T 3m1i_C 350 IQLSKIEERELFKTTLDYWHNLVADLFYEPLKKHIYEEICSQLRL-------VIIENMVR-------------------- 402 (1049)
T ss_dssp HHHHTSSCHHHHHHHHHHHHHHHHHHHHSTTCGGGGHHHHHHHHH-------HHHHTCCC--------------------
T ss_pred HHHHcCCcHHHHHHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHH-------HHHHhcCC--------------------
Confidence 99888889999999988777776632 1 1223344443322 22222100
Q ss_pred CCCCcccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcCCCCCCCCCCCCCCCCCHHH---------HHH
Q 000156 526 VEASESSFVRKSAASMLSGKRPVSAAPASKKGGPVKPSAKKDGSGKQETSKLTEAPEDVEPSEMSLEE---------IES 596 (2015)
Q Consensus 526 ~~~~~~~~~~~~~~s~~~~~~P~~~~~~~~k~~~~k~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~ee---------~e~ 596 (2015)
|+... -. . .++.+.+.+..-..|+ +-.
T Consensus 403 ~ed~~--~~--------~----------------------------------dd~~e~~r~~~~d~d~~~~~~~~~~~L~ 438 (1049)
T 3m1i_C 403 PEEVL--VV--------E----------------------------------NDEGEIVREFVKESDTIQLYKSEREVLV 438 (1049)
T ss_dssp CTTCC--EE--------E----------------------------------CTTSCEEECSSCCHHHHHHHHHHHHHHH
T ss_pred Cccee--ee--------e----------------------------------CCCCcchHhhhccchHHHHHHHHHHHHH
Confidence 00000 00 0 0000001111111111 111
Q ss_pred HhhccCcHH--------HHhhhc--cCCHHHHHHHHHHHHHHHHhcccc-c-hHHHHHHHHHhcCCCC---cccHHHHHH
Q 000156 597 RLGSLIPAD--------TVGQLK--SAVWKERLEAISSLRQQVEAVQNL-D-QSVEILVRLVCMLPGW---SEKNVQVQQ 661 (2015)
Q Consensus 597 ~~~~ll~~~--------l~~~L~--s~~Wk~Rl~a~e~L~~~v~~~~~~-~-~~~~~Lv~~L~~~pg~---~DsN~qV~~ 661 (2015)
.+..+.+.+ +...+. +.+|+.|.+++-.++.+.+..... . .....++..|...|.+ +|.++.|..
T Consensus 439 ~l~~~~~~~~l~~v~~~l~~~l~~~~~~W~~~eaal~algsia~~~~~~~e~~~l~~v~~~l~~l~~~~~~~~~~~~v~~ 518 (1049)
T 3m1i_C 439 YLTHLNVIDTEEIMISKLARQIDGSEWSWHNINTLSWAIGSISGTMSEDTEKRFVVTVIKDLLDLTVKKRGKDNKAVVAS 518 (1049)
T ss_dssp HHHHHCHHHHHHHHHHHHHHHHTSSSCCHHHHHHHHHHHHHTTTSSCHHHHHHHHHHHHHHHHHHTTSSCSHHHHHHHHH
T ss_pred HHHccCHHHHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHHhcccCchhhHHHHHHHHHHHHHHHhhhccccchHHHHH
Confidence 112222322 222333 478999999999999765432211 1 1133344444322333 245666665
Q ss_pred HHHHHHHHHHHHcCCCchhHHHHHHHHHHhhhcc--hhhhHHHHHHHHHHHhhhChhHH----------HHHHHHHh---
Q 000156 662 QVIEVINYLAATATKFPKKCVVLCLLGISERVAD--IKTRAHAMKCLTTFSEAVGPGFI----------FERLYKIM--- 726 (2015)
Q Consensus 662 ~~Le~l~~l~~~~~~~~~~~~~~il~~LveKlgD--~K~r~~a~~~L~~l~e~~~~~~V----------l~~L~~~l--- 726 (2015)
..+.++..+.+-... ....+..+++.+++.+.| .+++..|..+|..+++.++...+ ++.++..+
T Consensus 519 ~~~~~lgry~~~~~~-~~~~l~~vl~~ll~~l~~~~~~V~~~A~~al~~l~~~~~~~l~~~~~~~~~p~~~~il~~l~~~ 597 (1049)
T 3m1i_C 519 DIMYVVGQYPRFLKA-HWNFLRTVILKLFEFMHETHEGVQDMACDTFIKIVQKCKYHFVIQQPRESEPFIQTIIRDIQKT 597 (1049)
T ss_dssp HHHHHHHHCHHHHHH-CHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHTHHHHSCCTTCSSCHHHHHHHTHHHH
T ss_pred HHHHHHHHHHHHHHh-HHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCcHHHHHHHHHHHH
Confidence 677777765543211 234677788888888887 57999999999999998765433 55555533
Q ss_pred hhCCChhHHHHHHHHHHHHHHHhCC-CCC-C-hhh----HHHHHHhcCCC----C---C-chh-HHH--HHHHHHHHHHH
Q 000156 727 KDHKNPKVLSEGILWMVSAVEDFGV-SHL-K-LKD----LIDFCKDTGLQ----S---S-AAA-TRN--ATIKLLGALHK 788 (2015)
Q Consensus 727 ~~~KnpKv~~~~l~~L~~li~~fG~-~~l-~-~k~----li~~l~~~gL~----~---s-n~~-VR~--aA~~ll~~Ly~ 788 (2015)
...-.++......+.+..++...|. ... . +.. ++..+... +. + . ++. ++. ....++..+..
T Consensus 598 ~~~~~~~~~~~~~eai~~ii~~~~~~~~~~~~~~~l~~~~~~~~~~~-~~~~~~~~~~~~d~~~~~~l~~~l~~~~~~~~ 676 (1049)
T 3m1i_C 598 TADLQPQQVHTFYKACGIIISEERSVAERNRLLSDLMQLPNMAWDTI-VEQSTANPTLLLDSETVKIIANIIKTNVAVCT 676 (1049)
T ss_dssp HTTSCHHHHHHHHHHHHHHHHTCCSHHHHHHHHHHHTHHHHHHHHHH-HHHHHHCGGGGGSHHHHHHHHHHHHHHHHHHH
T ss_pred HHhCCHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHH-HHHHhhchhhhcCHHHHHHHHHHHHHHHHHHH
Confidence 2233455566667777777766552 100 0 111 22212111 11 0 0 222 232 22445667778
Q ss_pred HhChhHHhhhhhccHHHHHHHHHH---HhcC-CCCCCCCCcccccCccccCCCCCCCCCCCCCcccccccchHHHHhcCC
Q 000156 789 FVGPDIKGFLADVKPALLSALDAE---YEKN-PFEGTVVPKKTVRASESTSSVSSGGSDGLPREDISGKFTPTLVKSLES 864 (2015)
Q Consensus 789 ~~G~~l~~~L~~lkp~ll~~Le~e---f~k~-~~~~~p~p~R~~r~~~~~~s~~~~~~d~lprvdIs~~L~~~ll~~l~d 864 (2015)
.+|..+.+++..+-+..+..+..- ++.. ...+++. . ..|.+.....+.+.+
T Consensus 677 ~l~~~f~p~~~~i~~~~l~~~~~~~~~~~~~~~~~g~~~-~------------------~~p~~~~~~~~~~~l------ 731 (1049)
T 3m1i_C 677 SMGADFYPQLGHIYYNMLQLYRAVSSMISAQVAAEGLIA-T------------------KTPKVRGLRTIKKEI------ 731 (1049)
T ss_dssp HHGGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCGGG-G------------------GSHHHHHHHHHHHHH------
T ss_pred HhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCchh-h------------------hhHHHHHHHHHHHHH------
Confidence 888888777655444333222211 0000 0000000 0 000000000011111
Q ss_pred CChHHHHHHHHHHHHHHHhcccc----CCCCChhhHHHHHHhcccc--chHHHHHHHHHHHHHHHHHhChhhHHhhhHHH
Q 000156 865 PDWKVRLESIEAVNKILEEANKR----IQPAGTGELFGGLRGRLYD--SNKNLVMATLITLGAVASAMGPAVEKSSKGVL 938 (2015)
Q Consensus 865 ~~Wk~R~eale~L~~ll~~a~~~----I~~~~~~eL~~~L~~rL~D--sN~~V~~~Al~~l~~La~alg~~f~~~~~~ll 938 (2015)
+..+...+... .. ..+. ...++..+...+.. +.... ..++.+++.++..+|..+.+|+..++
T Consensus 732 ---------~~ll~~~~~~~-~~l~~~~~~~-~~~~l~~ll~~~~~~~~~~~~-~~~l~l~~~ii~~~~~~~~~~l~~i~ 799 (1049)
T 3m1i_C 732 ---------LKLVETYISKA-RNLDDVVKVL-VEPLLNAVLEDYMNNVPDARD-AEVLNCMTTVVEKVGHMIPQGVILIL 799 (1049)
T ss_dssp ---------HHHHHHHHHHC-SCHHHHHHHT-HHHHHHHHHHHHHHSCGGGCC-THHHHHHHHHHHHHGGGCHHHHHHHH
T ss_pred ---------HHHHHHHHHhC-CCHHHHHHHH-HHHHHHHHHHHHHhCCccccc-HHHHHHHHHHHHHHHHhhhhhHHHHH
Confidence 11222222110 00 0010 12233333222211 11111 45889999999999999999999888
Q ss_pred HHHHHHh-----C--CCcHHHHHHHHHHHHHHHHhcC
Q 000156 939 SDILKCL-----G--DNKKHMRECTLTVLDAWLAAVH 968 (2015)
Q Consensus 939 p~ll~~L-----~--D~k~~Vr~aa~~aL~~i~~~~g 968 (2015)
..++.+. + +..+.+|......+..++.++.
T Consensus 800 ~~l~~~~~~~i~~~~~~~pd~~~~~f~ll~~i~~~~~ 836 (1049)
T 3m1i_C 800 QSVFECTLDMINKDFTEYPEHRVEFYKLLKVINEKSF 836 (1049)
T ss_dssp HHHHHHHHHHHSSCSSSSHHHHHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHHHhcchhhCHHHHHHHHHHHHHHHHhCH
Confidence 8887774 3 4678899999999999998875
No 56
>3ltm_A Alpha-REP4; protein engineering, heat-like repeat, protein binding; HET: 1PE 12P; 2.15A {Synthetic}
Probab=98.41 E-value=3.4e-06 Score=95.63 Aligned_cols=179 Identities=18% Similarity=0.171 Sum_probs=134.9
Q ss_pred hhhhhhhccCChHHHHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHhhhcchhhhHhH
Q 000156 288 SGFWEGVKATKWSERKDAVAELTKLASTKRIAPGDFTEVCRTLKKLITDVNIAVAVEAIQAIGNLARGLRTHFSGSSRFL 367 (2015)
Q Consensus 288 ~~f~~~l~s~kWkeR~eaL~~L~~l~~~~ki~~~~y~~l~~~L~k~l~D~N~~V~~~A~~~l~~La~~L~~~f~~~~~~l 367 (2015)
+.+...+.+.+|..|..|+..|..+.. .+.++.|...+.|.+..|+..|+.+|+.+.. ...
T Consensus 22 ~~L~~~L~~~~~~vR~~A~~~L~~~~~---------~~~~~~L~~~l~~~~~~vr~~a~~aL~~~~~----------~~~ 82 (211)
T 3ltm_A 22 EMYIKNLQDDSYYVRRAAAYALGKIGD---------ERAVEPLIKALKDEDAWVRRAAADALGQIGD----------ERA 82 (211)
T ss_dssp HHHHHHTTCSSHHHHHHHHHHHHHHCC---------GGGHHHHHHHTTCSCHHHHHHHHHHHHHHCC----------GGG
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHhCC---------ccHHHHHHHHHcCCCHHHHHHHHHHHHhhCC----------HHH
Confidence 357777899999999999999988642 2467778888899999999999999988742 356
Q ss_pred HHHHHHHhccCcHHHHHHHHHHHHHHHHhcCCChHhHHHHHHHHhhcCChHHHHHHHHHHHHHHHhcChhHHHHhhhhHH
Q 000156 368 LPVLLEKLKEKKPTVAESLTQTLQAMHKAGCLNLVDVVEDVKTSVKNKVPLVRSLTLNWVTFCIETSSKAAVLKVHKDYV 447 (2015)
Q Consensus 368 lp~LL~klkdkk~~V~~aa~~aL~al~~~~~~~l~~il~~l~~~L~~Knp~vR~~~l~~L~~~l~~~~~~~l~~~l~~l~ 447 (2015)
++.|++.+++..+.||.++..+|..+.. ...++.|...+++.++.+|..++..|..+- . +..+
T Consensus 83 ~~~L~~~l~~~~~~vr~~a~~aL~~~~~------~~~~~~L~~~l~d~~~~vr~~a~~aL~~~~----~-------~~~~ 145 (211)
T 3ltm_A 83 VEPLIKALKDEDGWVRQSAAVALGQIGD------ERAVEPLIKALKDEDWFVRIAAAFALGEIG----D-------ERAV 145 (211)
T ss_dssp HHHHHHHTTCSSHHHHHHHHHHHHHHCC------GGGHHHHHHHTTCSSHHHHHHHHHHHHHHC----C-------GGGH
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHhCc------HHHHHHHHHHHhCCCHHHHHHHHHHHHHcC----C-------HHHH
Confidence 7889999999999999998888876521 457788889999999999999999987741 1 3467
Q ss_pred HHHHHHhcCCCHHHHHHHHHHHHHHHHHhCchHHHHHHHhccHHHHHHHHHHHhc
Q 000156 448 PICMECLNDGTPEVRDAAFSVLAAIAKSVGMRPLERSIEKLDDVRRNKLSEMIAG 502 (2015)
Q Consensus 448 p~l~k~L~Ds~~~VR~aA~~al~~l~~~~Ge~~~~~~l~~Ld~~~~kkI~e~~~~ 502 (2015)
+.|..+++|.++.||.+|..+|+.+..--.-..+..++..=++..+....+.+..
T Consensus 146 ~~L~~~l~d~~~~vr~~a~~aL~~~~~~~~~~~L~~~l~d~~~~vr~~A~~aL~~ 200 (211)
T 3ltm_A 146 EPLIKALKDEDGWVRQSAADALGEIGGERVRAAMEKLAETGTGFARKVAVNYLET 200 (211)
T ss_dssp HHHHHHTTCSSHHHHHHHHHHHHHHCSHHHHHHHHHHHHHCCHHHHHHHHHHHHC
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHhCchhHHHHHHHHHhCCCHHHHHHHHHHHHh
Confidence 8899999999999999999999876321111123333333345445554555544
No 57
>1oyz_A Hypothetical protein YIBA; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.10A {Escherichia coli} SCOP: a.118.1.16
Probab=98.41 E-value=1.9e-05 Score=93.73 Aligned_cols=93 Identities=12% Similarity=0.033 Sum_probs=65.3
Q ss_pred HHHHHhhhcc--hhhhHHHHHHHHHHHhhhChhHHHHHHHHHhhhCCChhHHHHHHHHHHHHHHHhCCCCCChhhHHHHH
Q 000156 686 LLGISERVAD--IKTRAHAMKCLTTFSEAVGPGFIFERLYKIMKDHKNPKVLSEGILWMVSAVEDFGVSHLKLKDLIDFC 763 (2015)
Q Consensus 686 l~~LveKlgD--~K~r~~a~~~L~~l~e~~~~~~Vl~~L~~~l~~~KnpKv~~~~l~~L~~li~~fG~~~l~~k~li~~l 763 (2015)
++.|+..+.| ..+|..|..+|..+. ...+++.+...+ .+.++.+|..++..|.. +|...-.+..+++.+
T Consensus 25 i~~L~~~L~~~~~~vr~~A~~~L~~~~----~~~~~~~L~~~l-~d~~~~vR~~A~~aL~~----l~~~~~~~~~l~~~L 95 (280)
T 1oyz_A 25 DDELFRLLDDHNSLKRISSARVLQLRG----GQDAVRLAIEFC-SDKNYIRRDIGAFILGQ----IKICKKCEDNVFNIL 95 (280)
T ss_dssp HHHHHHHTTCSSHHHHHHHHHHHHHHC----CHHHHHHHHHHH-TCSSHHHHHHHHHHHHH----SCCCTTTHHHHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHccC----CchHHHHHHHHH-cCCCHHHHHHHHHHHHH----hccccccchHHHHHH
Confidence 5566666665 457777777777654 334677777765 68899999998877654 443222345566766
Q ss_pred H-hcCCCCCchhHHHHHHHHHHHHHH
Q 000156 764 K-DTGLQSSAAATRNATIKLLGALHK 788 (2015)
Q Consensus 764 ~-~~gL~~sn~~VR~aA~~ll~~Ly~ 788 (2015)
. .+ +.+.++.||..|..+|+.+..
T Consensus 96 ~~~~-~~d~~~~vr~~a~~aL~~l~~ 120 (280)
T 1oyz_A 96 NNMA-LNDKSACVRATAIESTAQRCK 120 (280)
T ss_dssp HHHH-HHCSCHHHHHHHHHHHHHHHH
T ss_pred HHHH-hcCCCHHHHHHHHHHHHHHhc
Confidence 5 34 788999999999999998864
No 58
>1oyz_A Hypothetical protein YIBA; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.10A {Escherichia coli} SCOP: a.118.1.16
Probab=98.40 E-value=9.3e-06 Score=96.37 Aligned_cols=223 Identities=14% Similarity=0.144 Sum_probs=159.1
Q ss_pred HHHHHHHhhhCCChhHHHHHHHHHHHHHHHhCCCCCChhhHHHHHHhcCCCCCchhHHHHHHHHHHHHHHHhChhHHhhh
Q 000156 719 FERLYKIMKDHKNPKVLSEGILWMVSAVEDFGVSHLKLKDLIDFCKDTGLQSSAAATRNATIKLLGALHKFVGPDIKGFL 798 (2015)
Q Consensus 719 l~~L~~~l~~~KnpKv~~~~l~~L~~li~~fG~~~l~~k~li~~l~~~gL~~sn~~VR~aA~~ll~~Ly~~~G~~l~~~L 798 (2015)
++.++..+ .+.++.+|..++..|..+ |. ...++.+..+ +.+.++.||..|..+|+.+. ..-
T Consensus 25 i~~L~~~L-~~~~~~vr~~A~~~L~~~----~~-----~~~~~~L~~~-l~d~~~~vR~~A~~aL~~l~----~~~---- 85 (280)
T 1oyz_A 25 DDELFRLL-DDHNSLKRISSARVLQLR----GG-----QDAVRLAIEF-CSDKNYIRRDIGAFILGQIK----ICK---- 85 (280)
T ss_dssp HHHHHHHT-TCSSHHHHHHHHHHHHHH----CC-----HHHHHHHHHH-HTCSSHHHHHHHHHHHHHSC----CCT----
T ss_pred HHHHHHHH-HcCCHHHHHHHHHHHHcc----CC-----chHHHHHHHH-HcCCCHHHHHHHHHHHHHhc----ccc----
Confidence 45566664 678999999988887654 32 3466777777 89999999999998876442 100
Q ss_pred hhccHHHHHHHHHHHhcCCCCCCCCCcccccCccccCCCCCCCCCCCCCcccccccchHHH-HhcCCCChHHHHHHHHHH
Q 000156 799 ADVKPALLSALDAEYEKNPFEGTVVPKKTVRASESTSSVSSGGSDGLPREDISGKFTPTLV-KSLESPDWKVRLESIEAV 877 (2015)
Q Consensus 799 ~~lkp~ll~~Le~ef~k~~~~~~p~p~R~~r~~~~~~s~~~~~~d~lprvdIs~~L~~~ll-~~l~d~~Wk~R~eale~L 877 (2015)
. . ...+.+-+. ..+.|.+|.+|..++..|
T Consensus 86 -~-------------------------------------------~------~~~l~~~L~~~~~~d~~~~vr~~a~~aL 115 (280)
T 1oyz_A 86 -K-------------------------------------------C------EDNVFNILNNMALNDKSACVRATAIEST 115 (280)
T ss_dssp -T-------------------------------------------T------HHHHHHHHHHHHHHCSCHHHHHHHHHHH
T ss_pred -c-------------------------------------------c------chHHHHHHHHHHhcCCCHHHHHHHHHHH
Confidence 0 0 000111122 135678999999999999
Q ss_pred HHHHHhccccCCCCChhhHHHHHHhccccchHHHHHHHHHHHHHHHHHhChhhHHhhhHHHHHHHHHhCCCcHHHHHHHH
Q 000156 878 NKILEEANKRIQPAGTGELFGGLRGRLYDSNKNLVMATLITLGAVASAMGPAVEKSSKGVLSDILKCLGDNKKHMRECTL 957 (2015)
Q Consensus 878 ~~ll~~a~~~I~~~~~~eL~~~L~~rL~DsN~~V~~~Al~~l~~La~alg~~f~~~~~~llp~ll~~L~D~k~~Vr~aa~ 957 (2015)
..+.... +....+++..|...+.|.+..|+..|+..++.+.. ...+|.++..+.|....||..|.
T Consensus 116 ~~l~~~~-----~~~~~~~~~~L~~~l~d~~~~vR~~a~~aL~~~~~----------~~~~~~L~~~l~d~~~~vr~~a~ 180 (280)
T 1oyz_A 116 AQRCKKN-----PIYSPKIVEQSQITAFDKSTNVRRATAFAISVIND----------KATIPLLINLLKDPNGDVRNWAA 180 (280)
T ss_dssp HHHHHHC-----GGGHHHHHHHHHHHTTCSCHHHHHHHHHHHHTC-------------CCHHHHHHHHTCSSHHHHHHHH
T ss_pred HHHhccC-----CcccHHHHHHHHHHhhCCCHHHHHHHHHHHHhcCC----------HHHHHHHHHHHcCCCHHHHHHHH
Confidence 9876421 11125678888899999999999999999887643 23688899999999999999999
Q ss_pred HHHHHHHHhcCchhhHHHHHHHHhcCCCChhHHHHHHHHHHHHhccCCCCCChhhhHHHHHhhcCCCChHHHHHHHHHHH
Q 000156 958 TVLDAWLAAVHLDKMVPYVTTALTDAKLGAEGRKDLFDWLSKQLTGLSGFPDAAHLLKPASIAMTDKSSDVRKAAEACIV 1037 (2015)
Q Consensus 958 ~aL~~i~~~~gl~~ll~~l~~~L~~~k~~p~~R~~~l~~L~~~l~~~~~~~~~~~ll~pl~~~L~D~~~~VR~aA~~~L~ 1037 (2015)
.+|..+. ..-..+++.+...|.++ ++.+|..++..|... . ....++.+..+|.|.+ ||..|..+|.
T Consensus 181 ~aL~~~~--~~~~~~~~~L~~~l~d~--~~~vR~~A~~aL~~~-~-------~~~~~~~L~~~l~d~~--vr~~a~~aL~ 246 (280)
T 1oyz_A 181 FAININK--YDNSDIRDCFVEMLQDK--NEEVRIEAIIGLSYR-K-------DKRVLSVLCDELKKNT--VYDDIIEAAG 246 (280)
T ss_dssp HHHHHHT--CCCHHHHHHHHHHTTCS--CHHHHHHHHHHHHHT-T-------CGGGHHHHHHHHTSSS--CCHHHHHHHH
T ss_pred HHHHhhc--cCcHHHHHHHHHHhcCC--CHHHHHHHHHHHHHh-C-------CHhhHHHHHHHhcCcc--HHHHHHHHHH
Confidence 9997762 22456788888888876 589999999888753 1 1446667888888854 9999988887
Q ss_pred HH
Q 000156 1038 EI 1039 (2015)
Q Consensus 1038 ~l 1039 (2015)
.+
T Consensus 247 ~i 248 (280)
T 1oyz_A 247 EL 248 (280)
T ss_dssp HH
T ss_pred hc
Confidence 65
No 59
>3ltj_A Alpharep-4; protein engineering, heat-like repeat, protein binding; 1.80A {Synthetic}
Probab=98.40 E-value=4.2e-06 Score=94.14 Aligned_cols=149 Identities=20% Similarity=0.202 Sum_probs=123.8
Q ss_pred hhhhhhhccCChHHHHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHhhhcchhhhHhH
Q 000156 288 SGFWEGVKATKWSERKDAVAELTKLASTKRIAPGDFTEVCRTLKKLITDVNIAVAVEAIQAIGNLARGLRTHFSGSSRFL 367 (2015)
Q Consensus 288 ~~f~~~l~s~kWkeR~eaL~~L~~l~~~~ki~~~~y~~l~~~L~k~l~D~N~~V~~~A~~~l~~La~~L~~~f~~~~~~l 367 (2015)
+.+.+.+.+.+|..|..|+..|..+.. ...+..|...+.|.+..|+..|+.+|+.+.. ...
T Consensus 17 ~~~i~~L~~~~~~vr~~A~~~L~~~~~---------~~~~~~L~~~l~~~~~~vr~~a~~~L~~~~~----------~~~ 77 (201)
T 3ltj_A 17 EMYIKNLQDDSYYVRRAAAYALGKIGD---------ERAVEPLIKALKDEDAWVRRAAADALGQIGD----------ERA 77 (201)
T ss_dssp HHHHHHTTCSCHHHHHHHHHHHHHHCC---------GGGHHHHHHHTTCSSHHHHHHHHHHHHHHCC----------GGG
T ss_pred HHHHHHhcCCCHHHHHHHHHHHHhcCC---------hhHHHHHHHHHcCCCHHHHHHHHHHHHhhCC----------HHH
Confidence 468888999999999999999987642 2356777788899999999999999987642 256
Q ss_pred HHHHHHHhccCcHHHHHHHHHHHHHHHHhcCCChHhHHHHHHHHhhcCChHHHHHHHHHHHHHHHhcChhHHHHhhhhHH
Q 000156 368 LPVLLEKLKEKKPTVAESLTQTLQAMHKAGCLNLVDVVEDVKTSVKNKVPLVRSLTLNWVTFCIETSSKAAVLKVHKDYV 447 (2015)
Q Consensus 368 lp~LL~klkdkk~~V~~aa~~aL~al~~~~~~~l~~il~~l~~~L~~Knp~vR~~~l~~L~~~l~~~~~~~l~~~l~~l~ 447 (2015)
++.|++.+.+..+.||..+..+|..+.. ...++.+...+++.++.+|..++..|..+- -+..+
T Consensus 78 ~~~L~~~l~d~~~~vr~~a~~aL~~~~~------~~~~~~L~~~l~d~~~~vr~~a~~aL~~~~-----------~~~~~ 140 (201)
T 3ltj_A 78 VEPLIKALKDEDGWVRQSAAVALGQIGD------ERAVEPLIKALKDEDWFVRIAAAFALGEIG-----------DERAV 140 (201)
T ss_dssp HHHHHHHTTCSSHHHHHHHHHHHHHHCC------GGGHHHHHHHTTCSSHHHHHHHHHHHHHHT-----------CGGGH
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHhCc------HHHHHHHHHHHcCCCHHHHHHHHHHHHHhC-----------CHHHH
Confidence 7889999999999999988888876521 457888889999999999999999887641 14567
Q ss_pred HHHHHHhcCCCHHHHHHHHHHHHHH
Q 000156 448 PICMECLNDGTPEVRDAAFSVLAAI 472 (2015)
Q Consensus 448 p~l~k~L~Ds~~~VR~aA~~al~~l 472 (2015)
+.+..++.|.++.||.+|..+|+.+
T Consensus 141 ~~L~~~l~d~~~~vr~~A~~aL~~~ 165 (201)
T 3ltj_A 141 EPLIKALKDEDGWVRQSAADALGEI 165 (201)
T ss_dssp HHHHHHTTCSSHHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHh
Confidence 8899999999999999999999876
No 60
>3ibv_A Exportin-T; karyopherin, heat repeat, cytoplasm, nucleus, RNA- binding, transport, tRNA processing, tRNA-binding, RNA binding protein; 3.10A {Schizosaccharomyces pombe} PDB: 3icq_T*
Probab=98.23 E-value=0.0087 Score=83.11 Aligned_cols=581 Identities=11% Similarity=0.068 Sum_probs=307.1
Q ss_pred HHHHHHHHHHHHHhcCCCCCCC----ChHHHHHHHHHHhc-----ccCHHHHHHHHHHHHHHHHHhhhcchhhhHhHHHH
Q 000156 300 SERKDAVAELTKLASTKRIAPG----DFTEVCRTLKKLIT-----DVNIAVAVEAIQAIGNLARGLRTHFSGSSRFLLPV 370 (2015)
Q Consensus 300 keR~eaL~~L~~l~~~~ki~~~----~y~~l~~~L~k~l~-----D~N~~V~~~A~~~l~~La~~L~~~f~~~~~~llp~ 370 (2015)
..|--|+..|...++ .+... +...|-..|...+. +....|+...+.++..++...-+ ..+..+++.
T Consensus 58 ~vr~fa~~~L~~~I~--~l~~e~~~~~~~~lr~~ll~~l~~~~~~~~~~~IrnKL~~~la~l~~~~~p---~~Wp~~i~~ 132 (980)
T 3ibv_A 58 STRLICLQTLSEKVR--EWNNESNLLELQMIRDSVWSYIKELSFLDEPAYISNAVQHLLTLLFLQLYP---SNWNDFFAS 132 (980)
T ss_dssp HHHHHHHHHHHHHHH--HCCTTTSHHHHHHHHHHHHHHHHHCCSTTSCTHHHHHHHHHHHHHHHHHTT---TTCTTHHHH
T ss_pred HHHHHHHHHHHHHHH--hCChhhhHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHHHHhCc---ccCchHHHH
Confidence 445667777766554 34445 44444444444433 23566778888888888876432 344555666
Q ss_pred HHHHhccCcH-HHHHHHHHHHHHHHHh-cC----------------------CChHhHHHHHHHHh----hcCChHHHHH
Q 000156 371 LLEKLKEKKP-TVAESLTQTLQAMHKA-GC----------------------LNLVDVVEDVKTSV----KNKVPLVRSL 422 (2015)
Q Consensus 371 LL~klkdkk~-~V~~aa~~aL~al~~~-~~----------------------~~l~~il~~l~~~L----~~Knp~vR~~ 422 (2015)
++..++.... .........|..+..- .. ..+..+++.+...| .+.++.++..
T Consensus 133 l~~~~~~~~~~~~~~~~LriL~~i~EEv~~~~~~~~~~~~~r~~~lkd~m~~~~~~~i~~~~~~iL~~~~~~~~~~l~~~ 212 (980)
T 3ibv_A 133 LQGVIAASSQSEFSNFYLKVLLSIGDEIADSLVLKTDVQIQKDNLVKDAIRANDMSDIVSFVYEMMLAYSNAKNYGTVGL 212 (980)
T ss_dssp HHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCSCCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHhcCCChhHHHHHHHHHHHHhHHHHHhcccccCHHHHhhhHHHHHHHHhccHHHHHHHHHHHHHHHhccCCHHHHHH
Confidence 6655543222 1111111122211111 00 01222333333333 3378889999
Q ss_pred HHHHHHHHHHhcChhHHHHhhhhHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhCch-HHHHHHHhccHHHHHHHHHHHh
Q 000156 423 TLNWVTFCIETSSKAAVLKVHKDYVPICMECLNDGTPEVRDAAFSVLAAIAKSVGMR-PLERSIEKLDDVRRNKLSEMIA 501 (2015)
Q Consensus 423 ~l~~L~~~l~~~~~~~l~~~l~~l~p~l~k~L~Ds~~~VR~aA~~al~~l~~~~Ge~-~~~~~l~~Ld~~~~kkI~e~~~ 501 (2015)
++..|..++.-.+...+.. ..+++.+.+++.+ +++|++|.+||..+...-... .-..++..| .+.+.+.
T Consensus 213 ~L~~l~s~i~wi~~~~i~~--~~ll~~l~~~L~~--~~~r~~A~ecL~ei~~k~~~~~~k~~li~~l------~L~~~~~ 282 (980)
T 3ibv_A 213 CLQVYAQWVSWININLIVN--EPCMNLLYSFLQI--EELRCAACETMTEIVNKKMKPLEKLNLLNIL------NLNLFFS 282 (980)
T ss_dssp HHHHHHHHTTTSCHHHHHC--HHHHHHHHHHTTS--HHHHHHHHHHHHHHHHSCCCHHHHHHHHHHH------HHHHHHC
T ss_pred HHHHHHHHHhhcCHHhhhc--chHHHHHHHHcCC--hHHHHHHHHHHHHHHHcCCChhhHHHHHHHH------hHHHHHH
Confidence 9999998887445443322 6788999999987 899999999999998774431 112222222 1222221
Q ss_pred cCCCCCCCCCCCccccCCCCCCCCCCCCcccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcCCCCCCCC
Q 000156 502 GSGGDVATGTSSARVQTSGGSVPSVEASESSFVRKSAASMLSGKRPVSAAPASKKGGPVKPSAKKDGSGKQETSKLTEAP 581 (2015)
Q Consensus 502 ~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~s~~~~~~P~~~~~~~~k~~~~k~~~~~~~~~~~~~s~~~~~~ 581 (2015)
... . .+
T Consensus 283 ~l~--------------------------------------~----------------------------------~~-- 288 (980)
T 3ibv_A 283 KSQ--------------------------------------E----------------------------------QS-- 288 (980)
T ss_dssp C-------------------------------------------------------------------------------
T ss_pred HHh--------------------------------------c----------------------------------cc--
Confidence 100 0 00
Q ss_pred CCCCCCCCCHHHHHHHhhccC---cHHHHhhhccCC-H---HHHHHHHHHHHHHHHhccccchHHHHHHHHHhcCCCCcc
Q 000156 582 EDVEPSEMSLEEIESRLGSLI---PADTVGQLKSAV-W---KERLEAISSLRQQVEAVQNLDQSVEILVRLVCMLPGWSE 654 (2015)
Q Consensus 582 ~~~~~~~~s~ee~e~~~~~ll---~~~l~~~L~s~~-W---k~Rl~a~e~L~~~v~~~~~~~~~~~~Lv~~L~~~pg~~D 654 (2015)
+ . .|.-..+..++ +.+++.. .+.. | ..+..+...+. ...+.+++++..
T Consensus 289 ~-------D-~d~~~~la~L~~~~ge~l~~~-~~~~~~~~~~~~~~~~~~l~----------~ll~~lL~~~~~------ 343 (980)
T 3ibv_A 289 T-------D-PNFDEHVAKLINAQGVELVAI-KSDPSELSPELKENCSFQLY----------NLFPYLIRYLSD------ 343 (980)
T ss_dssp C-------C-HHHHHHHHHHHHHHHHHHHHH-HTSCC--CHHHHHHHHHHHH----------HTHHHHHHHHTC------
T ss_pred c-------c-HHHHHHHHHHHHHHHHHHHHH-ccCccccchhhhhhHHHHHH----------HHHHHHHHHhCC------
Confidence 0 0 11111111111 2222222 1111 1 11112222221 123344444432
Q ss_pred cHHHHHHHHHHHHHHHHHHc---CC---Cc---hhHHHHHHHHHHhhhcc-------h-----------hhhHHHHHHHH
Q 000156 655 KNVQVQQQVIEVINYLAATA---TK---FP---KKCVVLCLLGISERVAD-------I-----------KTRAHAMKCLT 707 (2015)
Q Consensus 655 sN~qV~~~~Le~l~~l~~~~---~~---~~---~~~~~~il~~LveKlgD-------~-----------K~r~~a~~~L~ 707 (2015)
...-|...++++|..++... +. .. ...+..+++.++.|+.= . -.|.... .|.
T Consensus 344 ~~deVs~~t~~Fw~~~l~~~~~~~~~~~~~~~~~~~l~~Ll~~li~k~~yp~d~~~~~~~d~ed~~~F~e~Rk~l~-~l~ 422 (980)
T 3ibv_A 344 DYDETSTAVFPFLSDLLVSLRKESSSKELSASLKEFLKSLLEAIIKKMKYDESQEWDDDPDSEEEAEFQEMRKKLK-IFQ 422 (980)
T ss_dssp SSHHHHHTTHHHHHHHHHHHHHHTTSCCCCHHHHHHHHHHHHHHHHTTSCCTTCCCCCCSSSSTHHHHHHHHHHHH-HHH
T ss_pred CchhHHHHHHHHHHHHHHHHHhccccccccHHHHHHHHHHHHHHHHHccCCCccccccccchhHHHHHHHHHHHHH-HHH
Confidence 11245556666666666432 11 11 23445556666665521 0 1355555 777
Q ss_pred HHHhhhChhHHHH----HHHHHhh------hCCChhHHHHHHHHHHHHHHHhCCCC-------CChhhHHHHHHhcCCC-
Q 000156 708 TFSEAVGPGFIFE----RLYKIMK------DHKNPKVLSEGILWMVSAVEDFGVSH-------LKLKDLIDFCKDTGLQ- 769 (2015)
Q Consensus 708 ~l~e~~~~~~Vl~----~L~~~l~------~~KnpKv~~~~l~~L~~li~~fG~~~-------l~~k~li~~l~~~gL~- 769 (2015)
..+...+++.+++ .+...+. .+.+|+.+..++..|..+-+...... -.+..+++++..+ +.
T Consensus 423 d~~~~l~~~~~l~~~~~~i~~~l~~~l~~~~~~~W~~~EaaL~~l~~iaE~i~~~~~~~~~~~~~lp~l~~ll~~l-l~s 501 (980)
T 3ibv_A 423 DTINSIDSSLFSSYMYSAITSSLSTAATLSPENSWQLIEFALYETYIFGEGLRGPDAFFNEVDKSPTVLSQILALV-TTS 501 (980)
T ss_dssp HHHHHHCHHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTTTTCCSGGGTBCSSSCCBCHHHHHHHHH-HHS
T ss_pred HHHHhcChHHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHhhccccccccCcccchhHHHHHHHHHH-HhC
Confidence 7788888888877 4433321 23569999999988877665332111 1123466666554 44
Q ss_pred ----CCchhHHHHHHHHHHHHHHHhChhHHhhhhhccHHHHHHHHHHHhcCCCCCCCCCcccccCccccCCCCCCCCCCC
Q 000156 770 ----SSAAATRNATIKLLGALHKFVGPDIKGFLADVKPALLSALDAEYEKNPFEGTVVPKKTVRASESTSSVSSGGSDGL 845 (2015)
Q Consensus 770 ----~sn~~VR~aA~~ll~~Ly~~~G~~l~~~L~~lkp~ll~~Le~ef~k~~~~~~p~p~R~~r~~~~~~s~~~~~~d~l 845 (2015)
+.+|.||..+..+++..+.|+... .+.-|.
T Consensus 502 ~i~~~~hp~V~~~~~~~l~rys~~~~~~-----~~~l~~----------------------------------------- 535 (980)
T 3ibv_A 502 QVCRHPHPLVQLLYMEILVRYASFFDYE-----SAAIPA----------------------------------------- 535 (980)
T ss_dssp STTTCCCHHHHHHHHHHHHHTGGGGGTC-----CTTHHH-----------------------------------------
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHhcC-----chhHHH-----------------------------------------
Confidence 788999999999999988877521 000011
Q ss_pred CCcccccccchHHHH--hcCCCChHHHHHHHHHHHHHHHhccccCCCCChhhHHHHHHhcccc----ch-----------
Q 000156 846 PREDISGKFTPTLVK--SLESPDWKVRLESIEAVNKILEEANKRIQPAGTGELFGGLRGRLYD----SN----------- 908 (2015)
Q Consensus 846 prvdIs~~L~~~ll~--~l~d~~Wk~R~eale~L~~ll~~a~~~I~~~~~~eL~~~L~~rL~D----sN----------- 908 (2015)
+...++. ++.+.+-++|..|...+..+++.+.+.+.|. ...++..|...|.- .+
T Consensus 536 --------~L~~ll~~~gl~~~~~~V~~~a~~af~~f~~~~~~~L~~~-~~~il~~l~~lL~~~~~~~~~~~~~~~~~~~ 606 (980)
T 3ibv_A 536 --------LIEYFVGPRGIHNTNERVRPRAWYLFYRFVKSIKKQVVNY-TESSLAMLGDLLNISVSPVTDMDAPVPTLNS 606 (980)
T ss_dssp --------HHHHHTSTTTTTCCCTTTHHHHHHHHHHHHHHTTTTCSSS-HHHHHHHTTGGGCCCCCCCCC--CSSCCHHH
T ss_pred --------HHHHHhccccccCCChhHHHHHHHHHHHHHHHhhHHhhhH-HHHHHHHHHHhhcCcCCCCCcccccccchhh
Confidence 1123444 5556667788889999999999887778765 47888888776641 00
Q ss_pred ------HHHHHHHHHHHHHHHHHhCh---hhHHhhhHHHHHHHHHhC----CCc----HH-HHHHHHHHHHHHHHhcC--
Q 000156 909 ------KNLVMATLITLGAVASAMGP---AVEKSSKGVLSDILKCLG----DNK----KH-MRECTLTVLDAWLAAVH-- 968 (2015)
Q Consensus 909 ------~~V~~~Al~~l~~La~alg~---~f~~~~~~llp~ll~~L~----D~k----~~-Vr~aa~~aL~~i~~~~g-- 968 (2015)
..=...-.+++|.|+..++. .-..|+..++++++..+. ..+ .. -....+.+++.+++-..
T Consensus 607 ~~~~~~~~~ql~L~eaig~li~~~~~~~e~~~~~l~~ll~pl~~~l~~~l~~~~~~~~~~~~i~~~i~al~~lakgf~~~ 686 (980)
T 3ibv_A 607 SIRNSDFNSQLYLFETVGVLISSGNLTPEEQALYCDSLINALIGKANAALSSDLSALENIISVYCSLMAIGNFAKGFPAR 686 (980)
T ss_dssp HHHTTTHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHHHHTTSCC--CHHHHHHHHHHHHHHHHHTSCSC
T ss_pred hcccCCchHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhcccCccHHHHHHHHHHHHHHHhccCCcc
Confidence 11233456788888888763 334678888888776553 211 11 11234555566665431
Q ss_pred ----------chhhHHHHHHHHhcCCCChhHHHHHHHHHHHHhccCCCCCChhhhHHHHHhhc-CC-CChHHHHHHHHHH
Q 000156 969 ----------LDKMVPYVTTALTDAKLGAEGRKDLFDWLSKQLTGLSGFPDAAHLLKPASIAM-TD-KSSDVRKAAEACI 1036 (2015)
Q Consensus 969 ----------l~~ll~~l~~~L~~~k~~p~~R~~~l~~L~~~l~~~~~~~~~~~ll~pl~~~L-~D-~~~~VR~aA~~~L 1036 (2015)
+..+++.+...|..-..+..+|..+...+.+.+...+. ++.+++++++..| .+ ...+. ...-..+
T Consensus 687 ~~~~~p~~~~f~~~~~~il~~l~~~~~~~~irea~~~~~~r~i~~lg~--~~~p~lp~~i~~ll~~~~~~e~-~~fL~l~ 763 (980)
T 3ibv_A 687 GSEEVAWLASFNKASDEIFLILDRMGFNEDIRGAVRFTSGRIINVVGP--DMLPKVPQLISILLNSIDMNEL-VDVLSFI 763 (980)
T ss_dssp C-CCCSHHHHHHHHHHHHHHHHHHSCCSHHHHHHHHHHHHHHTTTTHH--HHTTTHHHHHHHHHHHCCTTTH-HHHHHHH
T ss_pred cCCCCcHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHccH--hHHHHHHHHHHHHHhcCCHHHH-HHHHHHH
Confidence 11233344444542111477888888888888776543 2344444443332 22 12222 2333566
Q ss_pred HHHHHHcChhHHHHHhccC
Q 000156 1037 VEILRAGGQETIEKNLKDI 1055 (2015)
Q Consensus 1037 ~~l~~~~G~~~~~~~l~~L 1055 (2015)
+.++..+|.+ +.+.+..|
T Consensus 764 ~qli~~f~~~-~~~~l~~l 781 (980)
T 3ibv_A 764 SQLIHIYKDN-MMEITNRM 781 (980)
T ss_dssp HHHHHHTTTT-SHHHHHHH
T ss_pred HHHHHHHHHH-HHHHHHHH
Confidence 7777778877 45454433
No 61
>4db6_A Armadillo repeat protein; solenoid repeat, armadillo repeat motif, de novo protein; 1.80A {Synthetic construct} PDB: 4db9_A 4dba_A
Probab=98.10 E-value=1.9e-05 Score=89.27 Aligned_cols=185 Identities=13% Similarity=0.121 Sum_probs=136.6
Q ss_pred hhhhhhhccCChHHHHHHHHHHHHHhcCCCCCCCCh--HHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHhhhcchhh-h
Q 000156 288 SGFWEGVKATKWSERKDAVAELTKLASTKRIAPGDF--TEVCRTLKKLITDVNIAVAVEAIQAIGNLARGLRTHFSGS-S 364 (2015)
Q Consensus 288 ~~f~~~l~s~kWkeR~eaL~~L~~l~~~~ki~~~~y--~~l~~~L~k~l~D~N~~V~~~A~~~l~~La~~L~~~f~~~-~ 364 (2015)
+-+...+.+.++..|.+|+..|..+.....-....+ ..+++.|...+.+.+..++..|+.+|+.|+.+-...-... -
T Consensus 15 ~~l~~LL~s~~~~v~~~a~~~L~~l~~~~~~~~~~i~~~g~i~~L~~lL~~~~~~v~~~a~~~L~~l~~~~~~~~~~i~~ 94 (210)
T 4db6_A 15 PQMVQQLNSPDQQELQSALRKLSQIASGGNEQIQAVIDAGALPALVQLLSSPNEQILQEALWALSNIASGGNEQIQAVID 94 (210)
T ss_dssp HHHHHHTTCSCHHHHHHHHHHHHHHHTSCHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHTTSCHHHHHHHHH
T ss_pred HHHHHHhcCCCHHHHHHHHHHHHHHHcCCHHHHHHHHHcCCHHHHHHHHcCCCHHHHHHHHHHHHHHhcCCcHHHHHHHH
Confidence 356677899999999999999999884321000000 1367788888998899999999999999985322211111 2
Q ss_pred HhHHHHHHHHhccCcHHHHHHHHHHHHHHHHhcCCC-----hHhHHHHHHHHhhcCChHHHHHHHHHHHHHHHhcChhHH
Q 000156 365 RFLLPVLLEKLKEKKPTVAESLTQTLQAMHKAGCLN-----LVDVVEDVKTSVKNKVPLVRSLTLNWVTFCIETSSKAAV 439 (2015)
Q Consensus 365 ~~llp~LL~klkdkk~~V~~aa~~aL~al~~~~~~~-----l~~il~~l~~~L~~Knp~vR~~~l~~L~~~l~~~~~~~l 439 (2015)
...+|.|+..+.+....++..+..+|..+....... -..+++.++..+++.++.+|..++..|..+....+.. .
T Consensus 95 ~g~i~~L~~lL~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~i~~L~~ll~~~~~~v~~~a~~aL~~l~~~~~~~-~ 173 (210)
T 4db6_A 95 AGALPALVQLLSSPNEQILQEALWALSNIASGGNEQIQAVIDAGALPALVQLLSSPNEQILQEALWALSNIASGGNEQ-K 173 (210)
T ss_dssp TTCHHHHHHHTTCSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHHTSCHHH-H
T ss_pred CCCHHHHHHHHcCCcHHHHHHHHHHHHHHHcCCHHHHHHHHHcCcHHHHHHHHcCCCHHHHHHHHHHHHHHHcCCcHH-H
Confidence 357899999999999999999999999887430000 1236788889999999999999999999877643322 1
Q ss_pred HHh-hhhHHHHHHHHhcCCCHHHHHHHHHHHHHHH
Q 000156 440 LKV-HKDYVPICMECLNDGTPEVRDAAFSVLAAIA 473 (2015)
Q Consensus 440 ~~~-l~~l~p~l~k~L~Ds~~~VR~aA~~al~~l~ 473 (2015)
... -...++.+..++.+.+++||..|..+|..+.
T Consensus 174 ~~~~~~g~i~~L~~ll~~~~~~v~~~a~~aL~~l~ 208 (210)
T 4db6_A 174 QAVKEAGALEKLEQLQSHENEKIQKEAQEALEKLQ 208 (210)
T ss_dssp HHHHHTTHHHHHHHGGGCSCHHHHHHHHHHHHHHC
T ss_pred HHHHHCCCHHHHHHHHhCCCHHHHHHHHHHHHHHh
Confidence 111 2357899999999999999999999998764
No 62
>2vgl_A Adaptor protein complex AP-2, alpha 2 subunit; cytoplasmic vesicle, alternative splicing, endocytosis, lipid-binding, golgi apparatus, adaptor, membrane, transport; HET: IHP; 2.59A {Rattus norvegicus} PDB: 2xa7_A 2jkr_A 2jkt_A
Probab=98.10 E-value=0.00014 Score=96.26 Aligned_cols=394 Identities=14% Similarity=0.103 Sum_probs=223.8
Q ss_pred HHHHhhhcc---CCHHHHHHHHHHHHHHHHhccccchHHHHHHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHcCCCchh
Q 000156 604 ADTVGQLKS---AVWKERLEAISSLRQQVEAVQNLDQSVEILVRLVCMLPGWSEKNVQVQQQVIEVINYLAATATKFPKK 680 (2015)
Q Consensus 604 ~~l~~~L~s---~~Wk~Rl~a~e~L~~~v~~~~~~~~~~~~Lv~~L~~~pg~~DsN~qV~~~~Le~l~~l~~~~~~~~~~ 680 (2015)
.++.+.|.+ .+-..|..++..+.-+.-.+.+.....-.+++. +..+|+.....+.-.+..++ +-...
T Consensus 38 ~~ir~~~~~~~~~~~~~k~~~l~Kli~l~~~G~d~s~~~~~vvkl------~~s~~~~~Krl~YL~l~~~~----~~~~e 107 (621)
T 2vgl_A 38 ANIRSKFKGDKALDGYSKKKYVCKLLFIFLLGHDIDFGHMEAVNL------LSSNRYTEKQIGYLFISVLV----NSNSE 107 (621)
T ss_dssp HHHHHHHHSSSCCCHHHHHHHHHHHHHHHHHSCCCCSCHHHHHHG------GGCSCHHHHHHHHHHHHHSC----CCCHH
T ss_pred HHHHHHHhcCCCCCHHHHHHHHHHHHHHHHcCCCCchhHHHHHHH------hcCCCHHHHHHHHHHHHHHc----cCCcH
Confidence 355666763 367888899988876554333322112223332 34566666665554444333 22334
Q ss_pred HHHHHHHHHHhhhcch--hhhHHHHHHHHHHHhhhChhHHHHHHHHHhh-hCCChhHHHHHHHHHHHHHHHhCCCCCChh
Q 000156 681 CVVLCLLGISERVADI--KTRAHAMKCLTTFSEAVGPGFIFERLYKIMK-DHKNPKVLSEGILWMVSAVEDFGVSHLKLK 757 (2015)
Q Consensus 681 ~~~~il~~LveKlgD~--K~r~~a~~~L~~l~e~~~~~~Vl~~L~~~l~-~~KnpKv~~~~l~~L~~li~~fG~~~l~~k 757 (2015)
.+-.++..+..-+.|+ -+|..|..+|..+....-.+.+...+.+.+. .+.+|-||..++..+..+..... +.+...
T Consensus 108 ~~~L~iN~l~kDl~~~n~~ir~lALr~L~~i~~~e~~~~l~~~v~~~l~~~d~~~~VRK~A~~al~kl~~~~p-~~~~~~ 186 (621)
T 2vgl_A 108 LIRLINNAIKNDLASRNPTFMGLALHCIANVGSREMAEAFAGEIPKILVAGDTMDSVKQSAALCLLRLYRTSP-DLVPMG 186 (621)
T ss_dssp HHHHHHHHHHHHHHSCCHHHHHHHHHHHHHHCCHHHHHHHTTHHHHHHHCSSSCHHHHHHHHHHHHHHHHHCG-GGCCCC
T ss_pred HHHHHHHHHHHhcCCCCHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhCh-hhcCch
Confidence 4555566666656663 4677777777666442222234444444432 68999999999999999998543 333223
Q ss_pred hHHHHHHhcCCCCCchhHHHHHHHHHHHHHHHhChhHHhhhhhccHHHHHHHHHHHhcCCC-------CCCCCC------
Q 000156 758 DLIDFCKDTGLQSSAAATRNATIKLLGALHKFVGPDIKGFLADVKPALLSALDAEYEKNPF-------EGTVVP------ 824 (2015)
Q Consensus 758 ~li~~l~~~gL~~sn~~VR~aA~~ll~~Ly~~~G~~l~~~L~~lkp~ll~~Le~ef~k~~~-------~~~p~p------ 824 (2015)
.+++.+..+ |.+.|+.|+.+|..++.++...-+..+. .+.|.+...|..-+..-.. .+-+.|
T Consensus 187 ~~~~~l~~l-L~d~d~~V~~~a~~~l~~i~~~~~~~~~----~~~~~~~~~L~~ll~~~~~~~~~~~~~~~~~~w~qi~i 261 (621)
T 2vgl_A 187 DWTSRVVHL-LNDQHLGVVTAATSLITTLAQKNPEEFK----TSVSLAVSRLSRIVTSASTDLQDYTYYFVPAPWLSVKL 261 (621)
T ss_dssp SCHHHHHHH-TTCSCHHHHHHHHHHHHHHHHHCHHHHT----THHHHHHHHHHHHHHCCSSSCSTTEETTEESHHHHHHH
T ss_pred hHHHHHHHH-hCCCCccHHHHHHHHHHHHHHhChHHHH----HHHHHHHHHHHHHHhCCCCCccchhhcCCCCchHHHHH
Confidence 688888888 9999999999999999999765543322 2233333333332221000 000000
Q ss_pred cccccCccccCCCCCCCCCCCCC-c--ccccccc---hHHHHhcCCC----C-------hHHHHHHHHHHHHHHHhcccc
Q 000156 825 KKTVRASESTSSVSSGGSDGLPR-E--DISGKFT---PTLVKSLESP----D-------WKVRLESIEAVNKILEEANKR 887 (2015)
Q Consensus 825 ~R~~r~~~~~~s~~~~~~d~lpr-v--dIs~~L~---~~ll~~l~d~----~-------Wk~R~eale~L~~ll~~a~~~ 887 (2015)
.+.++ .+.+ . +....+. ..++..+.+. . .-+-.|++..+-.+ .
T Consensus 262 l~ll~--------------~~~~~~d~~~~~~l~~~L~~il~~~~~~~ks~~l~~~n~~~aVl~ea~~~i~~l---~--- 321 (621)
T 2vgl_A 262 LRLLQ--------------CYPPPEDPAVRGRLTECLETILNKAQEPPKSKKVQHSNAKNAVLFEAISLIIHH---D--- 321 (621)
T ss_dssp HHHGG--------------GSSSCSSHHHHHHHHHHHHHHHHHHHSCCSCSSHHHHHHHHHHHHHHHHHHHHH---C---
T ss_pred HHHHH--------------HhCCCCCHHHHHHHHHHHHHHHHhhccCcccccccccchHHHHHHHHHHHHHhc---C---
Confidence 00000 0000 0 1111111 1222221111 0 12222332222211 0
Q ss_pred CCCCChhhHHHHHHhccccchHHHHHHHHHHHHHHHHHhChhhHHhhhHHHHHHHHHhC-CCcHHHHHHHHHHHHHHHHh
Q 000156 888 IQPAGTGELFGGLRGRLYDSNKNLVMATLITLGAVASAMGPAVEKSSKGVLSDILKCLG-DNKKHMRECTLTVLDAWLAA 966 (2015)
Q Consensus 888 I~~~~~~eL~~~L~~rL~DsN~~V~~~Al~~l~~La~alg~~f~~~~~~llp~ll~~L~-D~k~~Vr~aa~~aL~~i~~~ 966 (2015)
-.+......+..|...|.+++.+++..|+..+..++..-+. ..++......++.+|. |....||..+.+.|..++..
T Consensus 322 ~~~~~~~~~~~~L~~~L~~~~~niry~aL~~l~~l~~~~~~--~~~~~~~~~~i~~~L~~d~d~~Ir~~aL~lL~~l~~~ 399 (621)
T 2vgl_A 322 SEPNLLVRACNQLGQFLQHRETNLRYLALESMCTLASSEFS--HEAVKTHIETVINALKTERDVSVRQRAVDLLYAMCDR 399 (621)
T ss_dssp CCHHHHHHHHHHHHHHSSCSCHHHHHHHHHHHHHHTTCTTT--HHHHHTTHHHHHHHHTTCCCHHHHHHHHHHHHHHCCH
T ss_pred CcHHHHHHHHHHHHHHhcCCCcchHHHHHHHHHHHHhccCc--HHHHHHHHHHHHHHhccCCCHhHHHHHHHHHHHHcCh
Confidence 01111244566777777778889999999999998855431 1344556778888998 99999999999998888876
Q ss_pred cCchhhHHHHHHHHhcCCCChhHHHHHHHHHHHHhccCCCCCChhhhHHHHHhhcCCCChHHHHHHHHHHHHH
Q 000156 967 VHLDKMVPYVTTALTDAKLGAEGRKDLFDWLSKQLTGLSGFPDAAHLLKPASIAMTDKSSDVRKAAEACIVEI 1039 (2015)
Q Consensus 967 ~gl~~ll~~l~~~L~~~k~~p~~R~~~l~~L~~~l~~~~~~~~~~~ll~pl~~~L~D~~~~VR~aA~~~L~~l 1039 (2015)
-.++.++..+...+.+. +.+.|.+++.++..+...++. .....+..++..+.+....|...+...+..+
T Consensus 400 ~Nv~~Iv~eL~~yl~~~--d~~~~~~~v~~I~~la~k~~~--~~~~~v~~Ll~ll~~~~~~v~~ev~~~l~~i 468 (621)
T 2vgl_A 400 SNAQQIVAEMLSYLETA--DYSIREEIVLKVAILAEKYAV--DYTWYVDTILNLIRIAGDYVSEEVWYRVIQI 468 (621)
T ss_dssp HHHHHHHHHHHHHHHHC--CHHHHHHHHHHHHHHHHHHCS--STHHHHHHHHHHHHHHGGGSCSHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHhc--CHHHHHHHHHHHHHHHHhcCC--cHHHHHHHHHHHHHhhcccchHHHHHHHHHH
Confidence 67788888888888764 478899988888876655432 2233344455555554444544444444433
No 63
>2db0_A 253AA long hypothetical protein; heat repeats, helical structure, structural genomics; 2.20A {Pyrococcus horikoshii}
Probab=98.02 E-value=0.00031 Score=74.72 Aligned_cols=198 Identities=20% Similarity=0.304 Sum_probs=146.6
Q ss_pred hhhccCChHHHHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHhc-ccCHHHHHHHHHHHHHHHHHhhhcchhhhHhHHHH
Q 000156 292 EGVKATKWSERKDAVAELTKLASTKRIAPGDFTEVCRTLKKLIT-DVNIAVAVEAIQAIGNLARGLRTHFSGSSRFLLPV 370 (2015)
Q Consensus 292 ~~l~s~kWkeR~eaL~~L~~l~~~~ki~~~~y~~l~~~L~k~l~-D~N~~V~~~A~~~l~~La~~L~~~f~~~~~~llp~ 370 (2015)
.-+.+.-|..++.|+.-+-.++.. .+.-|..++..|.-.+. +.-+..-.+-.+++|.+|+.= + ..++.++|.
T Consensus 39 ~~LDDDlwtV~kNAl~vi~~i~~~---~~el~epl~~kL~vm~~ksEaIpltqeIa~a~G~la~i~-P---e~v~~vVp~ 111 (253)
T 2db0_A 39 ELLDDDLWTVVKNAISIIMVIAKT---REDLYEPMLKKLFSLLKKSEAIPLTQEIAKAFGQMAKEK-P---ELVKSMIPV 111 (253)
T ss_dssp HHTTCSCHHHHHHHHHHHHHHHTT---CGGGHHHHHHHHHHHHHHCCSHHHHHHHHHHHHHHHHHC-H---HHHHHHHHH
T ss_pred HHhccHHHHHHHhHHHHHHHHHHH---hHHHHHHHHHHHHHHHhhcccCchHHHHHHHHhHHHHhC-H---HHHHhhHHH
Confidence 346889999999999999888752 12345666666666665 777777777778888888642 2 357889999
Q ss_pred HHHHhccCcHHHHHHHHHHHHHHHHhcCCChHhHHHHHHHHhhcCChHHHHHHHHHHHHHHHhcChhHHHHhhhhHHHHH
Q 000156 371 LLEKLKEKKPTVAESLTQTLQAMHKAGCLNLVDVVEDVKTSVKNKVPLVRSLTLNWVTFCIETSSKAAVLKVHKDYVPIC 450 (2015)
Q Consensus 371 LL~klkdkk~~V~~aa~~aL~al~~~~~~~l~~il~~l~~~L~~Knp~vR~~~l~~L~~~l~~~~~~~l~~~l~~l~p~l 450 (2015)
++..+.-..+.++-...-+|..++..++..+..++.+|..-+.+||-.=|..+++|+..+=. +. .++...++|-+
T Consensus 112 lfanyrigd~kikIn~~yaLeeIaranP~l~~~v~rdi~smltskd~~Dkl~aLnFi~alGe----n~-~~yv~PfLprL 186 (253)
T 2db0_A 112 LFANYRIGDEKTKINVSYALEEIAKANPMLMASIVRDFMSMLSSKNREDKLTALNFIEAMGE----NS-FKYVNPFLPRI 186 (253)
T ss_dssp HHHHSCCCSHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHTSCSSHHHHHHHHHHHHTCCT----TT-HHHHGGGHHHH
T ss_pred HHHHHhcCCccceecHHHHHHHHHHhChHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHhc----cC-ccccCcchHHH
Confidence 99999777888888888999999987444567888999999999999999999999876422 22 25567788999
Q ss_pred HHHhcCCCHHHHHHHHHHHHHHHHHhCc--hHHHHHHHhcc---HHHHHHHHHHHh
Q 000156 451 MECLNDGTPEVRDAAFSVLAAIAKSVGM--RPLERSIEKLD---DVRRNKLSEMIA 501 (2015)
Q Consensus 451 ~k~L~Ds~~~VR~aA~~al~~l~~~~Ge--~~~~~~l~~Ld---~~~~kkI~e~~~ 501 (2015)
..+|.|.|.-||..|.++|+.+...-.. +.+..-+..++ +.-++++++.+.
T Consensus 187 ~aLL~D~deiVRaSaVEtL~~lA~~npklRkii~~kl~e~~D~S~lv~~~V~egL~ 242 (253)
T 2db0_A 187 INLLHDGDEIVRASAVEALVHLATLNDKLRKVVIKRLEELNDTSSLVNKTVKEGIS 242 (253)
T ss_dssp HGGGGCSSHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHCCCSCHHHHHHHHHHHH
T ss_pred HHHHcCcchhhhHHHHHHHHHHHHcCHHHHHHHHHHHHHhcCcHHHHHHHHHHHHH
Confidence 9999999999999999999988754321 12333333443 345666666554
No 64
>4db8_A Armadillo-repeat protein; solenoid repeat, de novo protein; 2.50A {Synthetic construct}
Probab=98.01 E-value=3.9e-05 Score=89.17 Aligned_cols=183 Identities=14% Similarity=0.154 Sum_probs=136.8
Q ss_pred hhhhhhhccCChHHHHHHHHHHHHHhcCCCCCCCCh--HHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHhhhcchhh-h
Q 000156 288 SGFWEGVKATKWSERKDAVAELTKLASTKRIAPGDF--TEVCRTLKKLITDVNIAVAVEAIQAIGNLARGLRTHFSGS-S 364 (2015)
Q Consensus 288 ~~f~~~l~s~kWkeR~eaL~~L~~l~~~~ki~~~~y--~~l~~~L~k~l~D~N~~V~~~A~~~l~~La~~L~~~f~~~-~ 364 (2015)
+.|++.+.+.+...|..|+..|..++....-....+ ..+++.|.+.+.+.+..+...|+.+|+.|+.+-...-... -
T Consensus 15 ~~~~~~L~s~~~~~~~~a~~~L~~~l~~~~~~~~~~~~~g~i~~L~~lL~~~~~~v~~~a~~~L~~l~~~~~~~~~~i~~ 94 (252)
T 4db8_A 15 PQMTQQLNSDDMQEQLSATRKFSQILSDGNEQIQAVIDAGALPALVQLLSSPNEQILQEALWALSNIASGGNEQIQAVID 94 (252)
T ss_dssp HHHHHHHHSSCSSHHHHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHGGGCSCHHHHHHHHHHHHHHTTSCHHHHHHHHH
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHHcCCCchHHHHHHcCcHHHHHHHHcCCCHHHHHHHHHHHHHHhcCCHHHHHHHHH
Confidence 468889999999999999999987653210000000 1366788888998889999999999999986422211112 2
Q ss_pred HhHHHHHHHHhccCcHHHHHHHHHHHHHHHHhcCCCh-------HhHHHHHHHHhhcCChHHHHHHHHHHHHHHHhcChh
Q 000156 365 RFLLPVLLEKLKEKKPTVAESLTQTLQAMHKAGCLNL-------VDVVEDVKTSVKNKVPLVRSLTLNWVTFCIETSSKA 437 (2015)
Q Consensus 365 ~~llp~LL~klkdkk~~V~~aa~~aL~al~~~~~~~l-------~~il~~l~~~L~~Knp~vR~~~l~~L~~~l~~~~~~ 437 (2015)
...+|.|+..+.+....++..+..+|..+... ... ..+++.|...+++.++.+|..++..|..+.... ..
T Consensus 95 ~g~i~~L~~lL~~~~~~v~~~a~~~L~~l~~~--~~~~~~~~~~~~~i~~L~~lL~~~~~~v~~~a~~~L~~l~~~~-~~ 171 (252)
T 4db8_A 95 AGALPALVQLLSSPNEQILQEALWALSNIASG--GNEQIQAVIDAGALPALVQLLSSPNEQILQEALWALSNIASGG-NE 171 (252)
T ss_dssp TTHHHHHHHGGGCSCHHHHHHHHHHHHHHTTS--CHHHHHHHHHTTHHHHHHHGGGCSCHHHHHHHHHHHHHHTTSC-HH
T ss_pred cCCHHHHHHHHcCCCHHHHHHHHHHHHHhhcC--CchHHHHHHHCCCHHHHHHHHhCCCHHHHHHHHHHHHHHHcCC-hH
Confidence 24899999999999999999999999988653 111 136788899999999999999999998865433 22
Q ss_pred HHHHh-hhhHHHHHHHHhcCCCHHHHHHHHHHHHHHH
Q 000156 438 AVLKV-HKDYVPICMECLNDGTPEVRDAAFSVLAAIA 473 (2015)
Q Consensus 438 ~l~~~-l~~l~p~l~k~L~Ds~~~VR~aA~~al~~l~ 473 (2015)
..... -..++|.++.++.+.+++||..|..+|+.+.
T Consensus 172 ~~~~~~~~~~i~~L~~ll~~~~~~v~~~a~~~L~~l~ 208 (252)
T 4db8_A 172 QIQAVIDAGALPALVQLLSSPNEQILQEALWALSNIA 208 (252)
T ss_dssp HHHHHHHTTCHHHHHHGGGCSSHHHHHHHHHHHHHHT
T ss_pred HHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHh
Confidence 21111 2567899999999999999999999998886
No 65
>3ibv_A Exportin-T; karyopherin, heat repeat, cytoplasm, nucleus, RNA- binding, transport, tRNA processing, tRNA-binding, RNA binding protein; 3.10A {Schizosaccharomyces pombe} PDB: 3icq_T*
Probab=97.98 E-value=0.016 Score=80.61 Aligned_cols=620 Identities=10% Similarity=0.053 Sum_probs=312.3
Q ss_pred hhHhhhcCCcHHHHHHHHHHHHHHHHHhchhhhhhHHHHHHHHHHhhcCCChhHHHHHHHHHHHHHhhh-hhh---hHHH
Q 000156 56 LFKKTVADSNAPVQDKALDALIAYLKAADADAGRYAKEVCDAIAAKCLTGRPKTVEKAQAVFMLWVELE-AVD---VFLD 131 (2015)
Q Consensus 56 ~~~k~v~DsN~~vqe~~leal~~~l~~~~~~~~~~~~~v~~~LieK~l~~k~~~k~~a~~~ll~~~E~~-~~~---~v~~ 131 (2015)
++..+...+|+.+..++|+|+..|+.-...+.-- ...+++.+. ++++ .+.+|+.|.+|+..++... .++ .+++
T Consensus 197 iL~~~~~~~~~~l~~~~L~~l~s~i~wi~~~~i~-~~~ll~~l~-~~L~-~~~~r~~A~ecL~ei~~k~~~~~~k~~li~ 273 (980)
T 3ibv_A 197 MMLAYSNAKNYGTVGLCLQVYAQWVSWININLIV-NEPCMNLLY-SFLQ-IEELRCAACETMTEIVNKKMKPLEKLNLLN 273 (980)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHTTTSCHHHHH-CHHHHHHHH-HHTT-SHHHHHHHHHHHHHHHHSCCCHHHHHHHHH
T ss_pred HHHHHhccCCHHHHHHHHHHHHHHHhhcCHHhhh-cchHHHHHH-HHcC-ChHHHHHHHHHHHHHHHcCCChhhHHHHHH
Confidence 3444444578899999999999999866442111 134666655 5564 5899999999999888652 222 2222
Q ss_pred HH--HHHh---h--cCChhhHH-------HHHHHHHHHHHHhCCCC----------cChhHHHhhhhhhhcCCChhHHHH
Q 000156 132 VM--EKAI---K--NKVAKAVV-------PAIDVMFQALSEFGAKI----------IPPKRILKMLPELFDHQDQNVRAS 187 (2015)
Q Consensus 132 ~L--~~~~---~--~KnpKv~~-------~~l~~L~~~l~~fG~~~----------i~~k~il~~l~~ll~~~d~~VR~~ 187 (2015)
.| ...+ . +..+.... +.-..+..+ . -.+.. -.+..+++.+..+++|.+..|=..
T Consensus 274 ~l~L~~~~~~l~~~~~D~d~~~~la~L~~~~ge~l~~~-~-~~~~~~~~~~~~~~~~~l~~ll~~lL~~~~~~~deVs~~ 351 (980)
T 3ibv_A 274 ILNLNLFFSKSQEQSTDPNFDEHVAKLINAQGVELVAI-K-SDPSELSPELKENCSFQLYNLFPYLIRYLSDDYDETSTA 351 (980)
T ss_dssp HHHHHHHHCC-----CCHHHHHHHHHHHHHHHHHHHHH-H-TSCC--CHHHHHHHHHHHHHTHHHHHHHHTCSSHHHHHT
T ss_pred HHhHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHH-c-cCccccchhhhhhHHHHHHHHHHHHHHHhCCCchhHHHH
Confidence 22 1111 1 23333322 222222222 1 11110 113568899999999999888777
Q ss_pred HHHHHHHHHHHh---CC-chhhHHHhhhChHHHHHHHHHHHHhcCCCCCCCccchhhhhHhhhhhccccCCCCCCCCCCC
Q 000156 188 SKGLTLELCRWI---GK-DPVKTILFEKMRDTMKKELEVELVNVSGTARPTRKIRAEQDKELGQELISEDVGPGPSEEST 263 (2015)
Q Consensus 188 a~~l~~ely~~l---G~-~~l~~~l~~~Lk~~q~keLe~~f~k~~~~~~P~R~~rs~~~~~~~~ea~~~~~~~~~~~~~~ 263 (2015)
+..+...+-..+ .. ..+. ...++...+-++..+.+.. .. .+ ...
T Consensus 352 t~~Fw~~~l~~~~~~~~~~~~~----~~~~~~l~~Ll~~li~k~~------------yp--------~d---~~~----- 399 (980)
T 3ibv_A 352 VFPFLSDLLVSLRKESSSKELS----ASLKEFLKSLLEAIIKKMK------------YD--------ES---QEW----- 399 (980)
T ss_dssp THHHHHHHHHHHHHHTTSCCCC----HHHHHHHHHHHHHHHHTTS------------CC--------TT---CCC-----
T ss_pred HHHHHHHHHHHHHhcccccccc----HHHHHHHHHHHHHHHHHcc------------CC--------Cc---ccc-----
Confidence 766644332221 10 0000 0112222223333333221 00 00 000
Q ss_pred CCCCCCCCCCCCCCcccccccCcchhhhhhhccCChHHHHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHhc---ccCHH
Q 000156 264 ADVPPEIDEYELVDPVDILTPLEKSGFWEGVKATKWSERKDAVAELTKLASTKRIAPGDFTEVCRTLKKLIT---DVNIA 340 (2015)
Q Consensus 264 ~~~~~~iD~~dl~~~vdIl~kl~~~~f~~~l~s~kWkeR~eaL~~L~~l~~~~ki~~~~y~~l~~~L~k~l~---D~N~~ 340 (2015)
+.+.| . | | .++|.+ .+.+...+......+........-|.-+...+...+. ..+=.
T Consensus 400 ---~~~~d---~-e--d------~~~F~e------~Rk~l~~l~d~~~~l~~~~~l~~~~~~i~~~l~~~l~~~~~~~W~ 458 (980)
T 3ibv_A 400 ---DDDPD---S-E--E------EAEFQE------MRKKLKIFQDTINSIDSSLFSSYMYSAITSSLSTAATLSPENSWQ 458 (980)
T ss_dssp ---CCCSS---S-S--T------HHHHHH------HHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHTTSCHHHHHH
T ss_pred ---ccccc---h-h--H------HHHHHH------HHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHhcccCCCCHH
Confidence 00000 0 0 0 134422 2222233333222222100000001123344444442 34456
Q ss_pred HHHHHHHHHHHHHHHhhhc------chhhhHhHHHHHHHHhc-----cCcHHHHHHHHHHHHHHHHh---cCCChHhHHH
Q 000156 341 VAVEAIQAIGNLARGLRTH------FSGSSRFLLPVLLEKLK-----EKKPTVAESLTQTLQAMHKA---GCLNLVDVVE 406 (2015)
Q Consensus 341 V~~~A~~~l~~La~~L~~~------f~~~~~~llp~LL~klk-----dkk~~V~~aa~~aL~al~~~---~~~~l~~il~ 406 (2015)
.+..|+-+++.++++++.. ..++...+++-|...+. +..+.|+..+..++...... ....+..+++
T Consensus 459 ~~EaaL~~l~~iaE~i~~~~~~~~~~~~~lp~l~~ll~~ll~s~i~~~~hp~V~~~~~~~l~rys~~~~~~~~~l~~~L~ 538 (980)
T 3ibv_A 459 LIEFALYETYIFGEGLRGPDAFFNEVDKSPTVLSQILALVTTSQVCRHPHPLVQLLYMEILVRYASFFDYESAAIPALIE 538 (980)
T ss_dssp HHHHHHHHHHHTTTTCCSGGGTBCSSSCCBCHHHHHHHHHHHSSTTTCCCHHHHHHHHHHHHHTGGGGGTCCTTHHHHHH
T ss_pred HHHHHHHHHHHHHhhccccccccCcccchhHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHHHHhcCchhHHHHHH
Confidence 7888999999999998752 22455566666666554 78899999888888764433 2345677888
Q ss_pred HHHH--HhhcCChHHHHHHHHHHHHHHHhcChhHHHHhhhhHHHHHHHHhcCC---------------------CHHHHH
Q 000156 407 DVKT--SVKNKVPLVRSLTLNWVTFCIETSSKAAVLKVHKDYVPICMECLNDG---------------------TPEVRD 463 (2015)
Q Consensus 407 ~l~~--~L~~Knp~vR~~~l~~L~~~l~~~~~~~l~~~l~~l~p~l~k~L~Ds---------------------~~~VR~ 463 (2015)
.++. ++.|.++.||..++..+.++.+.+.+. +.++++.++..+..+|.-. ..+-+-
T Consensus 539 ~ll~~~gl~~~~~~V~~~a~~af~~f~~~~~~~-L~~~~~~il~~l~~lL~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql 617 (980)
T 3ibv_A 539 YFVGPRGIHNTNERVRPRAWYLFYRFVKSIKKQ-VVNYTESSLAMLGDLLNISVSPVTDMDAPVPTLNSSIRNSDFNSQL 617 (980)
T ss_dssp HHTSTTTTTCCCTTTHHHHHHHHHHHHHHTTTT-CSSSHHHHHHHTTGGGCCCCCCCCC--CSSCCHHHHHHTTTHHHHH
T ss_pred HHhccccccCCChhHHHHHHHHHHHHHHHhhHH-hhhHHHHHHHHHHHhhcCcCCCCCcccccccchhhhcccCCchHHH
Confidence 8888 888999999999999999999887653 4456666666666665411 112345
Q ss_pred HHHHHHHHHHHHhCc--hHHHHHHHhccHHHHHHHHHHHhcCCCCCCCCCCCccccCCCCCCCCCCCCcccccccccccc
Q 000156 464 AAFSVLAAIAKSVGM--RPLERSIEKLDDVRRNKLSEMIAGSGGDVATGTSSARVQTSGGSVPSVEASESSFVRKSAASM 541 (2015)
Q Consensus 464 aA~~al~~l~~~~Ge--~~~~~~l~~Ld~~~~kkI~e~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~s~ 541 (2015)
.-++++|.+....+. +....++..|-+--..+++.++....... ...++. + ..=..-+..++..
T Consensus 618 ~L~eaig~li~~~~~~~e~~~~~l~~ll~pl~~~l~~~l~~~~~~~-----~~~~~i---~--~~i~al~~lakgf---- 683 (980)
T 3ibv_A 618 YLFETVGVLISSGNLTPEEQALYCDSLINALIGKANAALSSDLSAL-----ENIISV---Y--CSLMAIGNFAKGF---- 683 (980)
T ss_dssp HHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHHHHTTSCC-------CHHHHH---H--HHHHHHHHHHHTS----
T ss_pred HHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhcccCc-----cHHHHH---H--HHHHHHHHHhccC----
Confidence 578888888888763 23445666654445556666654310000 000000 0 0000000000000
Q ss_pred cCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcCCCCCCCCCCCCCCCCCHHHHHHHhhccCcHHHHhhhc--cCCHHHHH
Q 000156 542 LSGKRPVSAAPASKKGGPVKPSAKKDGSGKQETSKLTEAPEDVEPSEMSLEEIESRLGSLIPADTVGQLK--SAVWKERL 619 (2015)
Q Consensus 542 ~~~~~P~~~~~~~~k~~~~k~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~ee~e~~~~~ll~~~l~~~L~--s~~Wk~Rl 619 (2015)
+.. + . .+ .+ -.+...+.+ +.+...|. .++...|.
T Consensus 684 ----~~~-------------~-----------~-----~~---~p---~~~~f~~~~-----~~il~~l~~~~~~~~ire 719 (980)
T 3ibv_A 684 ----PAR-------------G-----------S-----EE---VA---WLASFNKAS-----DEIFLILDRMGFNEDIRG 719 (980)
T ss_dssp ----CSC-------------C-----------------CC---CS---HHHHHHHHH-----HHHHHHHHHSCCSHHHHH
T ss_pred ----Ccc-------------c-----------C-----CC---Cc---HHHHHHHHH-----HHHHHHHHhcCCcHHHHH
Confidence 000 0 0 00 01 112222211 22323333 46788888
Q ss_pred HHHHHHHHHHHhccc-cchHHHHHHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHhhhcch--
Q 000156 620 EAISSLRQQVEAVQN-LDQSVEILVRLVCMLPGWSEKNVQVQQQVIEVINYLAATATKFPKKCVVLCLLGISERVADI-- 696 (2015)
Q Consensus 620 ~a~e~L~~~v~~~~~-~~~~~~~Lv~~L~~~pg~~DsN~qV~~~~Le~l~~l~~~~~~~~~~~~~~il~~LveKlgD~-- 696 (2015)
++..-+..++...+. ..+....++..|.. .+ ...-+...|.++..++..++.-....+..+++.++.++...
T Consensus 720 a~~~~~~r~i~~lg~~~~p~lp~~i~~ll~--~~---~~~e~~~fL~l~~qli~~f~~~~~~~l~~ll~~l~~~if~~l~ 794 (980)
T 3ibv_A 720 AVRFTSGRIINVVGPDMLPKVPQLISILLN--SI---DMNELVDVLSFISQLIHIYKDNMMEITNRMLPTLLMRIFSSLS 794 (980)
T ss_dssp HHHHHHHHHTTTTHHHHTTTHHHHHHHHHH--HC---CTTTHHHHHHHHHHHHHHTTTTSHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHccHhHHHHHHHHHHHHHh--cC---CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 888888888766322 22233333433321 11 11234567778888888776544455666777777765321
Q ss_pred ---------h----hhHHHHHHHHHHHhhh------------ChhHHHHHHHHHhhhCCChhHHHHHHHHHHHHHHHhCC
Q 000156 697 ---------K----TRAHAMKCLTTFSEAV------------GPGFIFERLYKIMKDHKNPKVLSEGILWMVSAVEDFGV 751 (2015)
Q Consensus 697 ---------K----~r~~a~~~L~~l~e~~------------~~~~Vl~~L~~~l~~~KnpKv~~~~l~~L~~li~~fG~ 751 (2015)
+ ++..-...|..+..+. ..+.++..++.++.+..++-++..|+..|.+++..+|.
T Consensus 795 ~~~~~td~~r~~~~l~r~~~~fl~~i~~~~~~~v~~s~~n~~~l~~~l~~l~~~a~~~~d~~~~K~a~~~l~~~v~~~~~ 874 (980)
T 3ibv_A 795 AAPQGTDDAVKQNDLRKSYISFILQLLNKGFGSILFTEENQVYFDPLINSILHFANLVGEPATQKSSIALVSKMVSLWGG 874 (980)
T ss_dssp C----CCHHHHHHHHHHHHHHHHHHHHHTTCTGGGGSHHHHTTHHHHHHHHHHHC-----CHHHHHHHHHHHHHHHC---
T ss_pred CCCCCcHHHHHHHHHHHHHHHHHHHHHhCCchhhhcCCcchHHHHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHCC
Confidence 1 1222222334343321 12235666666655567888999999999999999974
Q ss_pred CC-CC------hhhHHHHHHhc----CCCCCch---hHHHHHHHHHHHHHHHhChhHHhhh
Q 000156 752 SH-LK------LKDLIDFCKDT----GLQSSAA---ATRNATIKLLGALHKFVGPDIKGFL 798 (2015)
Q Consensus 752 ~~-l~------~k~li~~l~~~----gL~~sn~---~VR~aA~~ll~~Ly~~~G~~l~~~L 798 (2015)
.. ++ ++ +++.+-.. ++.-.|+ .|=.....++..+|...|+.+..||
T Consensus 875 ~~~~~gf~~f~~~-~~~~~f~~p~~~~f~~~Daq~~~~~~e~~~~~k~~~~~~g~~~~~~l 934 (980)
T 3ibv_A 875 KDGIAGFENFTLS-LTPLCFEMPVNPNFNTRDGQSLVVLGELAGLQKIILEKLGDIYKSYL 934 (980)
T ss_dssp ----CCHHHHHHH-HHHHHHHGGGC----------CHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCcchHHHHHHHH-HHHHHHHhhcCCCCChhhHHHHHHHHHHHHHHHHHHHhcCHHHHHHH
Confidence 32 21 23 44443222 0211222 3555667778888888888777776
No 66
>4hxt_A De novo protein OR329; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG; 1.95A {Artificial gene}
Probab=97.87 E-value=0.00014 Score=83.89 Aligned_cols=184 Identities=20% Similarity=0.172 Sum_probs=136.6
Q ss_pred hhhhhhccCChHHHHHHHHHHHHHhcCCCCCCCCh--HHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHhhhcchh-hhH
Q 000156 289 GFWEGVKATKWSERKDAVAELTKLASTKRIAPGDF--TEVCRTLKKLITDVNIAVAVEAIQAIGNLARGLRTHFSG-SSR 365 (2015)
Q Consensus 289 ~f~~~l~s~kWkeR~eaL~~L~~l~~~~ki~~~~y--~~l~~~L~k~l~D~N~~V~~~A~~~l~~La~~L~~~f~~-~~~ 365 (2015)
.+.+.+.+.++..|..|+..|..++....-....+ ..+++.|.+.+.+.+..+...|+.+|+.|+..-...-.. .-.
T Consensus 6 ~L~~~L~~~~~~~~~~a~~~L~~l~~~~~~~~~~~~~~g~i~~L~~ll~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~ 85 (252)
T 4hxt_A 6 KLVKLLTSTDSETQKEAARDLAEIASGPASAIKAIVDAGGVEVLVKLLTSTDSEVQKEAARALANIASGPDEAIKAIVDA 85 (252)
T ss_dssp HHHHHTTCSCHHHHHHHHHHHHHHHTSCHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHTTSCHHHHHHHHHT
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHhcCCcHHHHHHHHCCCHHHHHHHHhCCCHHHHHHHHHHHHHHHcCChHHHHHHHHC
Confidence 56677888889999999999999885321000000 136778888899888999999999999998532111111 123
Q ss_pred hHHHHHHHHhccCcHHHHHHHHHHHHHHHHhcCCCh------HhHHHHHHHHhhcCChHHHHHHHHHHHHHHHhcChhHH
Q 000156 366 FLLPVLLEKLKEKKPTVAESLTQTLQAMHKAGCLNL------VDVVEDVKTSVKNKVPLVRSLTLNWVTFCIETSSKAAV 439 (2015)
Q Consensus 366 ~llp~LL~klkdkk~~V~~aa~~aL~al~~~~~~~l------~~il~~l~~~L~~Knp~vR~~~l~~L~~~l~~~~~~~l 439 (2015)
..+|.++..+++....++..+..+|..+... .... ...++.+...+++.++.+|..++..|..+....+ ...
T Consensus 86 ~~i~~l~~ll~~~~~~v~~~a~~~L~~l~~~-~~~~~~~~~~~~~i~~L~~~l~~~~~~~~~~a~~~L~~l~~~~~-~~~ 163 (252)
T 4hxt_A 86 GGVEVLVKLLTSTDSEVQKEAARALANIASG-PDEAIKAIVDAGGVEVLVKLLTSTDSEVQKEAARALANIASGPD-EAI 163 (252)
T ss_dssp THHHHHHHHTTCSSHHHHHHHHHHHHHHTTS-CHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHTTSCH-HHH
T ss_pred CCHHHHHHHHcCCCHHHHHHHHHHHHHHHcC-CHHHHHHHHHCCCHHHHHHHHcCCCHHHHHHHHHHHHHHHcCCH-HHH
Confidence 5799999999999999999999999998743 1010 1467888899999999999999999998655332 211
Q ss_pred HH-hhhhHHHHHHHHhcCCCHHHHHHHHHHHHHHHH
Q 000156 440 LK-VHKDYVPICMECLNDGTPEVRDAAFSVLAAIAK 474 (2015)
Q Consensus 440 ~~-~l~~l~p~l~k~L~Ds~~~VR~aA~~al~~l~~ 474 (2015)
.. .-..++|.++.++.+.+++||..|..+|+.+..
T Consensus 164 ~~~~~~~~i~~L~~ll~~~~~~v~~~a~~~L~~l~~ 199 (252)
T 4hxt_A 164 KAIVDAGGVEVLVKLLTSTDSEVQKEAARALANIAS 199 (252)
T ss_dssp HHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHTT
T ss_pred HHHHHCcCHHHHHHHHCCCCHHHHHHHHHHHHHHHc
Confidence 11 125588999999999999999999999988874
No 67
>4hxt_A De novo protein OR329; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG; 1.95A {Artificial gene}
Probab=97.85 E-value=0.00036 Score=80.52 Aligned_cols=189 Identities=17% Similarity=0.125 Sum_probs=139.7
Q ss_pred hhhhhhccCChHHHHHHHHHHHHHhcC-CCCCCCC-hHHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHhhhcchh-hhH
Q 000156 289 GFWEGVKATKWSERKDAVAELTKLAST-KRIAPGD-FTEVCRTLKKLITDVNIAVAVEAIQAIGNLARGLRTHFSG-SSR 365 (2015)
Q Consensus 289 ~f~~~l~s~kWkeR~eaL~~L~~l~~~-~ki~~~~-y~~l~~~L~k~l~D~N~~V~~~A~~~l~~La~~L~~~f~~-~~~ 365 (2015)
.+...+.+.+...|..++..|..+... +.....- -...++.|...+.+.+..++..|+.+|+.|+..-...... .-.
T Consensus 48 ~L~~ll~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~i~~l~~ll~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~ 127 (252)
T 4hxt_A 48 VLVKLLTSTDSEVQKEAARALANIASGPDEAIKAIVDAGGVEVLVKLLTSTDSEVQKEAARALANIASGPDEAIKAIVDA 127 (252)
T ss_dssp HHHHHTTCSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHHTTCSSHHHHHHHHHHHHHHTTSCHHHHHHHHHT
T ss_pred HHHHHHhCCCHHHHHHHHHHHHHHHcCChHHHHHHHHCCCHHHHHHHHcCCCHHHHHHHHHHHHHHHcCCHHHHHHHHHC
Confidence 466667888899999999999998743 2110000 0135778888888889999999999999998532211111 123
Q ss_pred hHHHHHHHHhccCcHHHHHHHHHHHHHHHHhcCCCh------HhHHHHHHHHhhcCChHHHHHHHHHHHHHHHhcChhHH
Q 000156 366 FLLPVLLEKLKEKKPTVAESLTQTLQAMHKAGCLNL------VDVVEDVKTSVKNKVPLVRSLTLNWVTFCIETSSKAAV 439 (2015)
Q Consensus 366 ~llp~LL~klkdkk~~V~~aa~~aL~al~~~~~~~l------~~il~~l~~~L~~Knp~vR~~~l~~L~~~l~~~~~~~l 439 (2015)
..+|.|++.+++....++..+..+|..+... .... ..+++.+...+.+.++.+|..++..|..+... .+...
T Consensus 128 ~~i~~L~~~l~~~~~~~~~~a~~~L~~l~~~-~~~~~~~~~~~~~i~~L~~ll~~~~~~v~~~a~~~L~~l~~~-~~~~~ 205 (252)
T 4hxt_A 128 GGVEVLVKLLTSTDSEVQKEAARALANIASG-PDEAIKAIVDAGGVEVLVKLLTSTDSEVQKEAARALANIASG-PTSAI 205 (252)
T ss_dssp THHHHHHHHTTCSCHHHHHHHHHHHHHHTTS-CHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHTTS-BHHHH
T ss_pred CCHHHHHHHHcCCCHHHHHHHHHHHHHHHcC-CHHHHHHHHHCcCHHHHHHHHCCCCHHHHHHHHHHHHHHHcC-CHHHH
Confidence 5899999999999999999999999988753 1000 23678889999999999999999999887653 22222
Q ss_pred HHh-hhhHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhCch
Q 000156 440 LKV-HKDYVPICMECLNDGTPEVRDAAFSVLAAIAKSVGMR 479 (2015)
Q Consensus 440 ~~~-l~~l~p~l~k~L~Ds~~~VR~aA~~al~~l~~~~Ge~ 479 (2015)
... -..+++.+...+.+.+++||..|..+|+.+....+..
T Consensus 206 ~~l~~~~~i~~L~~ll~~~~~~v~~~a~~~L~~l~~~~~~~ 246 (252)
T 4hxt_A 206 KAIVDAGGVEVLQKLLTSTDSEVQKEAQRALENIKSGGWLE 246 (252)
T ss_dssp HHHHHTTHHHHHHHGGGCSCHHHHHHHHHHHHHHHHTCBCC
T ss_pred HHHHHCCCHHHHHHHHCCCcHHHHHHHHHHHHHHHcCCCcc
Confidence 111 1457899999999999999999999999999876543
No 68
>4hat_C Exportin-1; heat repeat, nuclear export, RAN-ranbp1, LMB, leptomycin B, protein transport-antibiotic complex; HET: GNP LMB; 1.78A {Saccharomyces cerevisiae} PDB: 4hau_C* 4hav_C* 4hb2_C* 4hax_C* 4haw_C* 4hay_C* 4hb3_C* 4haz_C* 4hb4_C* 3m1i_C* 4hb0_C* 4gmx_C* 4gpt_C* 3vyc_A 2l1l_B
Probab=97.85 E-value=0.053 Score=75.49 Aligned_cols=198 Identities=11% Similarity=0.058 Sum_probs=141.4
Q ss_pred hHHHHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHhcc--cCHHHHHHHHHHHHHHHHHhhhc-chhhhHhHHHHHHHHh
Q 000156 299 WSERKDAVAELTKLASTKRIAPGDFTEVCRTLKKLITD--VNIAVAVEAIQAIGNLARGLRTH-FSGSSRFLLPVLLEKL 375 (2015)
Q Consensus 299 WkeR~eaL~~L~~l~~~~ki~~~~y~~l~~~L~k~l~D--~N~~V~~~A~~~l~~La~~L~~~-f~~~~~~llp~LL~kl 375 (2015)
|+.=++.|..+..+... .-..-++..|.+.+.+ .+=..+..++-|+|.++.++..+ ..+++..++|.|+..+
T Consensus 430 f~~~Rd~L~~l~~l~~~-----~~~~~~~~~l~~~l~~~~~~W~~~EA~~~a~gaIa~~~~~~~e~~~l~~vi~~Ll~l~ 504 (1023)
T 4hat_C 430 YKSEREVLVYLTHLNVI-----DTEEIMISKLARQIDGSEWSWHNINTLSWAIGSISGTMSEDTEKRFVVTVIKDLLDLC 504 (1023)
T ss_dssp HHHHHHHHHHHHHHCHH-----HHHHHHHHHHHHHHSSTTCCHHHHHHHHHHHHHTTTSSCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccCHH-----HHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHhh
Confidence 44334666655554320 1122345555555553 56778889999999999998765 6689999999999887
Q ss_pred c-----cCcHHHHHHHHHHHHHHHHh---cCCChHhHHHHHHHHhhcCChHHHHHHHHHHHHHHHhcChhHH-------H
Q 000156 376 K-----EKKPTVAESLTQTLQAMHKA---GCLNLVDVVEDVKTSVKNKVPLVRSLTLNWVTFCIETSSKAAV-------L 440 (2015)
Q Consensus 376 k-----dkk~~V~~aa~~aL~al~~~---~~~~l~~il~~l~~~L~~Knp~vR~~~l~~L~~~l~~~~~~~l-------~ 440 (2015)
. |.|..|++.+.-++...... ....+..++..++.++.+.+|.+...++..+..+.+.+..... .
T Consensus 505 ~~~~~~d~k~~v~~t~~~~lGry~~wl~~~~~~L~~vl~~L~~~l~~~~~~v~~~A~~al~~l~~~c~~~l~~~~~~e~~ 584 (1023)
T 4hat_C 505 VKKRGKDNKAVVASDIMYVVGQYPRFLKAHWNFLRTVILKLFEFMHETHEGVQDMACDTFIKIVQKCKYHFVIQQPRESE 584 (1023)
T ss_dssp HHCCSHHHHHHHHHHHHHHHHTCHHHHHHCHHHHHHHHHHHHHHTTCSCHHHHHHHHHHHHHHHHHHTHHHHSCCTTCSS
T ss_pred hccccCcchHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHhhccCCCCCc
Confidence 5 56777777776666543322 1223667788888889888999999999999988887764321 2
Q ss_pred HhhhhHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhCchH-HHHHHHhccHHHHHHHHHHHh
Q 000156 441 KVHKDYVPICMECLNDGTPEVRDAAFSVLAAIAKSVGMRP-LERSIEKLDDVRRNKLSEMIA 501 (2015)
Q Consensus 441 ~~l~~l~p~l~k~L~Ds~~~VR~aA~~al~~l~~~~Ge~~-~~~~l~~Ld~~~~kkI~e~~~ 501 (2015)
+++..++..+..++++-.+.-+....++++++....+... ...++..|-+.-..++++.++
T Consensus 585 p~~~~il~~l~~~~~~l~~~~~~~lyeai~~vi~~~~~~~~~~~~l~~L~~~~~~~~~~l~~ 646 (1023)
T 4hat_C 585 PFIQTIIRDIQKTTADLQPQQVHTFYKACGIIISEERSVAERNRLLSDLMQLPNMAWDTIVE 646 (1023)
T ss_dssp CHHHHHHHTHHHHHTTSCHHHHHHHHHHHHHHHTTCCSHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhCCCHhhHHHHHHHHHHhHHHHHHHHHH
Confidence 4678888888999999999999999999999999998654 556777766555555555543
No 69
>4db6_A Armadillo repeat protein; solenoid repeat, armadillo repeat motif, de novo protein; 1.80A {Synthetic construct} PDB: 4db9_A 4dba_A
Probab=97.82 E-value=6.3e-05 Score=84.85 Aligned_cols=184 Identities=17% Similarity=0.215 Sum_probs=132.1
Q ss_pred chHHHHhcCCCChHHHHHHHHHHHHHHHhccccCCCCChhhHHHHHHhccccchHHHHHHHHHHHHHHHHHhChhhHHhh
Q 000156 855 TPTLVKSLESPDWKVRLESIEAVNKILEEANKRIQPAGTGELFGGLRGRLYDSNKNLVMATLITLGAVASAMGPAVEKSS 934 (2015)
Q Consensus 855 ~~~ll~~l~d~~Wk~R~eale~L~~ll~~a~~~I~~~~~~eL~~~L~~rL~DsN~~V~~~Al~~l~~La~alg~~f~~~~ 934 (2015)
.+-|...+.+.++.+|.+|+..|..+..........-.-...++.|...|.+.+..++..|+.+++.|+..-........
T Consensus 14 ~~~l~~LL~s~~~~v~~~a~~~L~~l~~~~~~~~~~i~~~g~i~~L~~lL~~~~~~v~~~a~~~L~~l~~~~~~~~~~i~ 93 (210)
T 4db6_A 14 LPQMVQQLNSPDQQELQSALRKLSQIASGGNEQIQAVIDAGALPALVQLLSSPNEQILQEALWALSNIASGGNEQIQAVI 93 (210)
T ss_dssp HHHHHHHTTCSCHHHHHHHHHHHHHHHTSCHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHTTSCHHHHHHHH
T ss_pred hHHHHHHhcCCCHHHHHHHHHHHHHHHcCCHHHHHHHHHcCCHHHHHHHHcCCCHHHHHHHHHHHHHHhcCCcHHHHHHH
Confidence 45677888999999999999999998742111000000125678889999999999999999999998743211111221
Q ss_pred -hHHHHHHHHHhCCCcHHHHHHHHHHHHHHHHhcC-------chhhHHHHHHHHhcCCCChhHHHHHHHHHHHHhccCCC
Q 000156 935 -KGVLSDILKCLGDNKKHMRECTLTVLDAWLAAVH-------LDKMVPYVTTALTDAKLGAEGRKDLFDWLSKQLTGLSG 1006 (2015)
Q Consensus 935 -~~llp~ll~~L~D~k~~Vr~aa~~aL~~i~~~~g-------l~~ll~~l~~~L~~~k~~p~~R~~~l~~L~~~l~~~~~ 1006 (2015)
...+|.++..|.+.+..++..|..+|..+..... -..+++.+...|.++ ++.+|..++..|.........
T Consensus 94 ~~g~i~~L~~lL~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~i~~L~~ll~~~--~~~v~~~a~~aL~~l~~~~~~ 171 (210)
T 4db6_A 94 DAGALPALVQLLSSPNEQILQEALWALSNIASGGNEQIQAVIDAGALPALVQLLSSP--NEQILQEALWALSNIASGGNE 171 (210)
T ss_dssp HTTCHHHHHHHTTCSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHHTTCS--CHHHHHHHHHHHHHHHTSCHH
T ss_pred HCCCHHHHHHHHcCCcHHHHHHHHHHHHHHHcCCHHHHHHHHHcCcHHHHHHHHcCC--CHHHHHHHHHHHHHHHcCCcH
Confidence 2478999999999999999999999999874321 134678888888876 578898888888765542111
Q ss_pred CC-C--hhhhHHHHHhhcCCCChHHHHHHHHHHHHHH
Q 000156 1007 FP-D--AAHLLKPASIAMTDKSSDVRKAAEACIVEIL 1040 (2015)
Q Consensus 1007 ~~-~--~~~ll~pl~~~L~D~~~~VR~aA~~~L~~l~ 1040 (2015)
.. . ....+..+...+.+.+.+||+.|..+|..+.
T Consensus 172 ~~~~~~~~g~i~~L~~ll~~~~~~v~~~a~~aL~~l~ 208 (210)
T 4db6_A 172 QKQAVKEAGALEKLEQLQSHENEKIQKEAQEALEKLQ 208 (210)
T ss_dssp HHHHHHHTTHHHHHHHGGGCSCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHCCCHHHHHHHHhCCCHHHHHHHHHHHHHHh
Confidence 10 1 1234566888999999999999999987763
No 70
>4db8_A Armadillo-repeat protein; solenoid repeat, de novo protein; 2.50A {Synthetic construct}
Probab=97.81 E-value=4.9e-05 Score=88.35 Aligned_cols=185 Identities=12% Similarity=0.117 Sum_probs=135.8
Q ss_pred hhhhhhccCChHHHHHHHHHHHHHhcC-CCCCCCCh-HHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHhhhcchhh-hH
Q 000156 289 GFWEGVKATKWSERKDAVAELTKLAST-KRIAPGDF-TEVCRTLKKLITDVNIAVAVEAIQAIGNLARGLRTHFSGS-SR 365 (2015)
Q Consensus 289 ~f~~~l~s~kWkeR~eaL~~L~~l~~~-~ki~~~~y-~~l~~~L~k~l~D~N~~V~~~A~~~l~~La~~L~~~f~~~-~~ 365 (2015)
.+...+.+.++..|..|+..|..++.. +.....-. ...++.|...+.+.+..++..|+.+|+.|+..-....... -.
T Consensus 58 ~L~~lL~~~~~~v~~~a~~~L~~l~~~~~~~~~~i~~~g~i~~L~~lL~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~ 137 (252)
T 4db8_A 58 ALVQLLSSPNEQILQEALWALSNIASGGNEQIQAVIDAGALPALVQLLSSPNEQILQEALWALSNIASGGNEQIQAVIDA 137 (252)
T ss_dssp HHHHGGGCSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHGGGCSCHHHHHHHHHHHHHHTTSCHHHHHHHHHT
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHcCCHHHHHHHHcCCCHHHHHHHHHHHHHhhcCCchHHHHHHHC
Confidence 466677888899999999999998742 21100000 1367788888998899999999999999986433321222 23
Q ss_pred hHHHHHHHHhccCcHHHHHHHHHHHHHHHHhcCCCh-----HhHHHHHHHHhhcCChHHHHHHHHHHHHHHHhcChhHHH
Q 000156 366 FLLPVLLEKLKEKKPTVAESLTQTLQAMHKAGCLNL-----VDVVEDVKTSVKNKVPLVRSLTLNWVTFCIETSSKAAVL 440 (2015)
Q Consensus 366 ~llp~LL~klkdkk~~V~~aa~~aL~al~~~~~~~l-----~~il~~l~~~L~~Knp~vR~~~l~~L~~~l~~~~~~~l~ 440 (2015)
..+|.|++.+.+....|+..+..+|..+........ ..+++.+...+++.++.+|..++..|..+.... +....
T Consensus 138 ~~i~~L~~lL~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~i~~L~~ll~~~~~~v~~~a~~~L~~l~~~~-~~~~~ 216 (252)
T 4db8_A 138 GALPALVQLLSSPNEQILQEALWALSNIASGGNEQIQAVIDAGALPALVQLLSSPNEQILQEALWALSNIASGG-NEQKQ 216 (252)
T ss_dssp THHHHHHHGGGCSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTCHHHHHHGGGCSSHHHHHHHHHHHHHHTTSC-HHHHH
T ss_pred CCHHHHHHHHhCCCHHHHHHHHHHHHHHHcCChHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHhcCC-HHHHH
Confidence 589999999999999999999999998875310000 245788889999999999999999999876432 22222
Q ss_pred Hhh-hhHHHHHHHHhcCCCHHHHHHHHHHHHHHHH
Q 000156 441 KVH-KDYVPICMECLNDGTPEVRDAAFSVLAAIAK 474 (2015)
Q Consensus 441 ~~l-~~l~p~l~k~L~Ds~~~VR~aA~~al~~l~~ 474 (2015)
... ..+++.+..++.+.+++||..|..+|+.+.+
T Consensus 217 ~~~~~g~i~~L~~ll~~~~~~v~~~A~~~L~~l~~ 251 (252)
T 4db8_A 217 AVKEAGALEKLEQLQSHENEKIQKEAQEALEKLQS 251 (252)
T ss_dssp HHHHTTHHHHHHTTTTCSSSHHHHTHHHHHHTTC-
T ss_pred HHHHCCcHHHHHHHhCCCCHHHHHHHHHHHHHHhc
Confidence 222 3488999999999999999999999986643
No 71
>2db0_A 253AA long hypothetical protein; heat repeats, helical structure, structural genomics; 2.20A {Pyrococcus horikoshii}
Probab=97.52 E-value=0.0031 Score=67.24 Aligned_cols=173 Identities=14% Similarity=0.154 Sum_probs=120.2
Q ss_pred cchHHHHhcCCCChHHHHHHHHHHHHHHHhccccCCCCChhhHHHHHHhcc-ccchHHHHHHHHHHHHHHHHHhChhhHH
Q 000156 854 FTPTLVKSLESPDWKVRLESIEAVNKILEEANKRIQPAGTGELFGGLRGRL-YDSNKNLVMATLITLGAVASAMGPAVEK 932 (2015)
Q Consensus 854 L~~~ll~~l~d~~Wk~R~eale~L~~ll~~a~~~I~~~~~~eL~~~L~~rL-~DsN~~V~~~Al~~l~~La~alg~~f~~ 932 (2015)
+..+++..+.|+-|.+|+.|+.-+..++.+ .|..+..+..-|...+ ++--..+-+.-.+.+|.++..- + .
T Consensus 33 ~l~~lI~~LDDDlwtV~kNAl~vi~~i~~~-----~~el~epl~~kL~vm~~ksEaIpltqeIa~a~G~la~i~-P---e 103 (253)
T 2db0_A 33 VLKKLIELLDDDLWTVVKNAISIIMVIAKT-----REDLYEPMLKKLFSLLKKSEAIPLTQEIAKAFGQMAKEK-P---E 103 (253)
T ss_dssp HHHHHHHHTTCSCHHHHHHHHHHHHHHHTT-----CGGGHHHHHHHHHHHHHHCCSHHHHHHHHHHHHHHHHHC-H---H
T ss_pred HHHHHHHHhccHHHHHHHhHHHHHHHHHHH-----hHHHHHHHHHHHHHHHhhcccCchHHHHHHHHhHHHHhC-H---H
Confidence 556788889999999999999999888753 1222233333333333 2333334344445555555322 1 3
Q ss_pred hhhHHHHHHHHHhCCCcHHHHHHHHHHHHHHHHhcC--chhhHHHHHHHHhcCCCChhHHHHHHHHHHHHhccCCCC--C
Q 000156 933 SSKGVLSDILKCLGDNKKHMRECTLTVLDAWLAAVH--LDKMVPYVTTALTDAKLGAEGRKDLFDWLSKQLTGLSGF--P 1008 (2015)
Q Consensus 933 ~~~~llp~ll~~L~D~k~~Vr~aa~~aL~~i~~~~g--l~~ll~~l~~~L~~~k~~p~~R~~~l~~L~~~l~~~~~~--~ 1008 (2015)
.++.++|.++..+.-..+.+|--..-+|..++...+ +..++..+...|.++ +-.-|..+++|+.. ++.. .
T Consensus 104 ~v~~vVp~lfanyrigd~kikIn~~yaLeeIaranP~l~~~v~rdi~smltsk--d~~Dkl~aLnFi~a----lGen~~~ 177 (253)
T 2db0_A 104 LVKSMIPVLFANYRIGDEKTKINVSYALEEIAKANPMLMASIVRDFMSMLSSK--NREDKLTALNFIEA----MGENSFK 177 (253)
T ss_dssp HHHHHHHHHHHHSCCCSHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHTSCS--SHHHHHHHHHHHHT----CCTTTHH
T ss_pred HHHhhHHHHHHHHhcCCccceecHHHHHHHHHHhChHHHHHHHHHHHHHhcCC--ChHHHHHHHHHHHH----HhccCcc
Confidence 467889999999988888888888889999998875 455666777777766 45678999999863 3321 2
Q ss_pred ChhhhHHHHHhhcCCCChHHHHHHHHHHHHHHH
Q 000156 1009 DAAHLLKPASIAMTDKSSDVRKAAEACIVEILR 1041 (2015)
Q Consensus 1009 ~~~~ll~pl~~~L~D~~~~VR~aA~~~L~~l~~ 1041 (2015)
.+.+.++-++..|.|++.-||..|.++|..+..
T Consensus 178 yv~PfLprL~aLL~D~deiVRaSaVEtL~~lA~ 210 (253)
T 2db0_A 178 YVNPFLPRIINLLHDGDEIVRASAVEALVHLAT 210 (253)
T ss_dssp HHGGGHHHHHGGGGCSSHHHHHHHHHHHHHHHT
T ss_pred ccCcchHHHHHHHcCcchhhhHHHHHHHHHHHH
Confidence 345666779999999999999999999986643
No 72
>1xqr_A HSPBP1 protein; armadillo repeat, superhelical twist, chaperone; 2.10A {Homo sapiens} SCOP: a.118.1.21 PDB: 1xqs_A*
Probab=97.47 E-value=0.0012 Score=78.90 Aligned_cols=173 Identities=14% Similarity=0.110 Sum_probs=124.5
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCCh--HHHHHHHHH-HhcccCHHHHHHHHHHHHHHHHHhhhcchhhh--HhHHHHHHHH
Q 000156 300 SERKDAVAELTKLASTKRIAPGDF--TEVCRTLKK-LITDVNIAVAVEAIQAIGNLARGLRTHFSGSS--RFLLPVLLEK 374 (2015)
Q Consensus 300 keR~eaL~~L~~l~~~~ki~~~~y--~~l~~~L~k-~l~D~N~~V~~~A~~~l~~La~~L~~~f~~~~--~~llp~LL~k 374 (2015)
.+|..|++.|..++...... .++ ...++.|.. .+.+.+..|+..|+.+|+.++..-. ....++ ...+|.|+..
T Consensus 55 e~k~~Al~~L~~lv~~~dna-~~~~~~G~l~~Lv~~lL~s~~~~vr~~Aa~~Lg~ia~~n~-~~~~~vv~~g~l~~Ll~L 132 (296)
T 1xqr_A 55 QEREGALELLADLCENMDNA-ADFCQLSGMHLLVGRYLEAGAAGLRWRAAQLIGTCSQNVA-AIQEQVLGLGALRKLLRL 132 (296)
T ss_dssp HHHHHHHHHHHHHHTSHHHH-HHHHHTTHHHHHHHTTTTCSSHHHHHHHHHHHHHHHTTCH-HHHHHHHHTTHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhChhhH-HHHHHcCCHHHHHHHHHcCCCHHHHHHHHHHHHHHHhCCH-HHHHHHHHCCCHHHHHHH
Confidence 46788888888877432100 011 123455666 8888899999999999999986421 122221 2588999999
Q ss_pred hcc-CcHHHHHHHHHHHHHHHHhcCCCh-----HhHHHHHHHHhhcCChHHHHHHHHHHHHHHHhcChhHHHHhh-hhHH
Q 000156 375 LKE-KKPTVAESLTQTLQAMHKAGCLNL-----VDVVEDVKTSVKNKVPLVRSLTLNWVTFCIETSSKAAVLKVH-KDYV 447 (2015)
Q Consensus 375 lkd-kk~~V~~aa~~aL~al~~~~~~~l-----~~il~~l~~~L~~Knp~vR~~~l~~L~~~l~~~~~~~l~~~l-~~l~ 447 (2015)
+.. .+..|+..+.-||..++.++.... ...++.|...|++.++.+|..++..|..+....+ ....... .-++
T Consensus 133 L~~~~~~~v~~~A~~ALsnl~~~~~~~~~~~~~~ggi~~L~~lL~~~d~~v~~~A~~aLs~L~~~~~-~~~~~vv~~g~i 211 (296)
T 1xqr_A 133 LDRDACDTVRVKALFAISCLVREQEAGLLQFLRLDGFSVLMRAMQQQVQKLKVKSAFLLQNLLVGHP-EHKGTLCSMGMV 211 (296)
T ss_dssp HHHCSCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHCG-GGHHHHHHTTHH
T ss_pred HccCCCHHHHHHHHHHHHHHHcCCcHHHHHHHHCCCHHHHHHHHcCCCHHHHHHHHHHHHHHHhCCh-HHHHHHHHcCCH
Confidence 984 588999999999999986411111 1356788888999999999999999988776532 2221112 3588
Q ss_pred HHHHHHhcCCCHHHHHHHHHHHHHHHHH
Q 000156 448 PICMECLNDGTPEVRDAAFSVLAAIAKS 475 (2015)
Q Consensus 448 p~l~k~L~Ds~~~VR~aA~~al~~l~~~ 475 (2015)
|.|+.+|.+.++.||+.|..+|+.+...
T Consensus 212 ~~Lv~LL~~~d~~v~~~al~aL~~l~~~ 239 (296)
T 1xqr_A 212 QQLVALVRTEHSPFHEHVLGALCSLVTD 239 (296)
T ss_dssp HHHHHHHTSCCSTHHHHHHHHHHHHHTT
T ss_pred HHHHHHHcCCChhHHHHHHHHHHHHHhC
Confidence 9999999999999999999999999865
No 73
>3b2a_A TON_1937, putative uncharacterized protein; heat-repeats, hypothetical, unknown function; 2.20A {Thermococcus onnurineus}
Probab=97.46 E-value=0.0021 Score=71.75 Aligned_cols=180 Identities=13% Similarity=0.139 Sum_probs=146.1
Q ss_pred HHHHhcCCCChHHHHHHHHHHHHHHHhccccCCCCChhhHHHHHHhccccchHHHHHHHHHHHHHHHHHhChhhHHhhhH
Q 000156 857 TLVKSLESPDWKVRLESIEAVNKILEEANKRIQPAGTGELFGGLRGRLYDSNKNLVMATLITLGAVASAMGPAVEKSSKG 936 (2015)
Q Consensus 857 ~ll~~l~d~~Wk~R~eale~L~~ll~~a~~~I~~~~~~eL~~~L~~rL~DsN~~V~~~Al~~l~~La~alg~~f~~~~~~ 936 (2015)
.++..+.|+|-.++..++..+++++..+++....-.+.++++.+...+.+.|-.|...|++|++.|......+=+.| ..
T Consensus 37 ~L~~LL~dkD~~vk~raL~~LeellK~~~~~l~~~~~e~~Ld~iI~llk~~dEkval~A~r~L~~LLe~vpL~~~~y-~K 115 (265)
T 3b2a_A 37 LILELAGEDDETTRLRAFVALGEILKRADSDLRMMVLERHLDVFINALSQENEKVTIKALRALGYLVKDVPMGSKTF-LK 115 (265)
T ss_dssp HHHHHTTSSCHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTCCSTTHHHHHHHHHHHHHHHTTCCBCHHHH-HH
T ss_pred HHHHHHhccchHHHHHHHHHHHHHHHhccccccHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHcCCCCCHHHH-HH
Confidence 46677899999999999999999998764444444468899999999999999999999999999998776554444 45
Q ss_pred HHHHHHHHhCCCcHHHHHHHHHHHHHHHHhcC-chhhHHHHHHHHhcCCCChhHHHHHHHHHHHHhccCCCCCChhhhHH
Q 000156 937 VLSDILKCLGDNKKHMRECTLTVLDAWLAAVH-LDKMVPYVTTALTDAKLGAEGRKDLFDWLSKQLTGLSGFPDAAHLLK 1015 (2015)
Q Consensus 937 llp~ll~~L~D~k~~Vr~aa~~aL~~i~~~~g-l~~ll~~l~~~L~~~k~~p~~R~~~l~~L~~~l~~~~~~~~~~~ll~ 1015 (2015)
++-++.....+++..++..+.+.++.+ ..+. ...+...+...+.++ +++++...+..+.+.......+..+..++.
T Consensus 116 l~~aL~dlik~~~~il~~eaae~Lgkl-kv~~~~~~V~~~l~sLl~Sk--d~~vK~agl~~L~eia~~S~D~~i~~~I~~ 192 (265)
T 3b2a_A 116 AAKTLVSLLESPDDMMRIETIDVLSKL-QPLEDSKLVRTYINELVVSP--DLYTKVAGFCLFLNMLNSSADSGHLTLILD 192 (265)
T ss_dssp HHHHHHHHTTSCCHHHHHHHHHHHHHC-CBSCCCHHHHHHHHHHHTCS--SHHHHHHHHHHHHHHGGGCSSCCCGGGTTT
T ss_pred HHHHHHHHhcCCCchHHHHHHHHhCcC-CcccchHHHHHHHHHHHhCC--ChhHHHHHHHHHHHhhcccCCHHHHHHHHH
Confidence 778888889999999999999999998 4444 577888888888655 689999999998875554444455677777
Q ss_pred HHHhhcCCCChHHHHHHHHHHHHHH
Q 000156 1016 PASIAMTDKSSDVRKAAEACIVEIL 1040 (2015)
Q Consensus 1016 pl~~~L~D~~~~VR~aA~~~L~~l~ 1040 (2015)
-+-..|...++.+++-|-.++..+.
T Consensus 193 eI~elL~~eD~~l~e~aLd~Le~il 217 (265)
T 3b2a_A 193 EIPSLLQNDNEFIVELALDVLEKAL 217 (265)
T ss_dssp THHHHHTCSCHHHHHHHHHHHHHHT
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHH
Confidence 7888898889999999988776654
No 74
>3b2a_A TON_1937, putative uncharacterized protein; heat-repeats, hypothetical, unknown function; 2.20A {Thermococcus onnurineus}
Probab=97.37 E-value=0.0034 Score=70.02 Aligned_cols=181 Identities=14% Similarity=0.133 Sum_probs=140.9
Q ss_pred hhhhhhhccCChHHHHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHhhhcchhhhHhH
Q 000156 288 SGFWEGVKATKWSERKDAVAELTKLASTKRIAPGDFTEVCRTLKKLITDVNIAVAVEAIQAIGNLARGLRTHFSGSSRFL 367 (2015)
Q Consensus 288 ~~f~~~l~s~kWkeR~eaL~~L~~l~~~~ki~~~~y~~l~~~L~k~l~D~N~~V~~~A~~~l~~La~~L~~~f~~~~~~l 367 (2015)
+++.+.+.+++=+.-..|++.|..|+.+--+.+.+|..+..+|...+++.|-.+...|+..++.+ ......+.+
T Consensus 78 d~iI~llk~~dEkval~A~r~L~~LLe~vpL~~~~y~Kl~~aL~dlik~~~~il~~eaae~Lgkl------kv~~~~~~V 151 (265)
T 3b2a_A 78 DVFINALSQENEKVTIKALRALGYLVKDVPMGSKTFLKAAKTLVSLLESPDDMMRIETIDVLSKL------QPLEDSKLV 151 (265)
T ss_dssp HHHHHTCCSTTHHHHHHHHHHHHHHHTTCCBCHHHHHHHHHHHHHHTTSCCHHHHHHHHHHHHHC------CBSCCCHHH
T ss_pred HHHHHHHhccchhHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHhcCCCchHHHHHHHHhCcC------CcccchHHH
Confidence 35666677777777788999999999776788889999999999999999999999888888877 233446677
Q ss_pred HHHHHHHhccCcHHHHHHHHHHHHHHHHhc--CCChHhHHHHHHHHhhcCChHHHHHHHHHHHHHHHhcChhHHHHhhhh
Q 000156 368 LPVLLEKLKEKKPTVAESLTQTLQAMHKAG--CLNLVDVVEDVKTSVKNKVPLVRSLTLNWVTFCIETSSKAAVLKVHKD 445 (2015)
Q Consensus 368 lp~LL~klkdkk~~V~~aa~~aL~al~~~~--~~~l~~il~~l~~~L~~Knp~vR~~~l~~L~~~l~~~~~~~l~~~l~~ 445 (2015)
+..++..++.++..|..++..++..+..++ .-.+..++..|..-+++++|.++.-++..+.+++...-...+...+..
T Consensus 152 ~~~l~sLl~Skd~~vK~agl~~L~eia~~S~D~~i~~~I~~eI~elL~~eD~~l~e~aLd~Le~ils~pi~~~~~~~~~~ 231 (265)
T 3b2a_A 152 RTYINELVVSPDLYTKVAGFCLFLNMLNSSADSGHLTLILDEIPSLLQNDNEFIVELALDVLEKALSFPLLENVKIELLK 231 (265)
T ss_dssp HHHHHHHHTCSSHHHHHHHHHHHHHHGGGCSSCCCGGGTTTTHHHHHTCSCHHHHHHHHHHHHHHTTSCCCSCCHHHHHH
T ss_pred HHHHHHHHhCCChhHHHHHHHHHHHhhcccCCHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHcCcccHhHHHHHHH
Confidence 778888889999999999999999998761 133788999999999999999999999999998876433323233333
Q ss_pred HHHHHHHHh-cCCCHHHHHHHHHHHHHHHH
Q 000156 446 YVPICMECL-NDGTPEVRDAAFSVLAAIAK 474 (2015)
Q Consensus 446 l~p~l~k~L-~Ds~~~VR~aA~~al~~l~~ 474 (2015)
+...+.... -...|.+|+.|+.....+-.
T Consensus 232 ~~~~v~~l~~~~~~~~~~~ka~~v~~~le~ 261 (265)
T 3b2a_A 232 ISRIVDGLVYREGAPIIRLKAKKVSDLIDS 261 (265)
T ss_dssp HHHHHHHGGGCSSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCChhHHHHHHHHHHHHHH
Confidence 444444444 58899999999877665543
No 75
>3oc3_A Helicase MOT1, MOT1; regulation of transcription, hydrolase-transc complex; HET: MES; 3.10A {Encephalitozoon cuniculi}
Probab=96.96 E-value=0.0023 Score=78.90 Aligned_cols=150 Identities=11% Similarity=0.057 Sum_probs=101.7
Q ss_pred hhhhhhhccCChHHHHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHhhhcchhhhHhH
Q 000156 288 SGFWEGVKATKWSERKDAVAELTKLASTKRIAPGDFTEVCRTLKKLITDVNIAVAVEAIQAIGNLARGLRTHFSGSSRFL 367 (2015)
Q Consensus 288 ~~f~~~l~s~kWkeR~eaL~~L~~l~~~~ki~~~~y~~l~~~L~k~l~D~N~~V~~~A~~~l~~La~~L~~~f~~~~~~l 367 (2015)
+.+...+-+.+|..|..|.-.|+.+++......+-. ...|. -.|++++..||- ..|.-|+
T Consensus 177 E~L~~DLFdp~WEiRHGAALGLREILR~hG~GAGR~-----------~~~N~---DLAvRLLCVLAL---DRFGDYV--- 236 (800)
T 3oc3_A 177 EQISDNLLSYEWYKRHGAFLAFAAMFSEIDNGGDIQ-----------IRVDS---KLFSKIYEILVT---DKFNDFV--- 236 (800)
T ss_dssp HHHHHHTTCSSHHHHHHHHHHHHHHHHHCC----CC-----------CCCCT---THHHHHHHHHHH---BCCBBCS---
T ss_pred HHHHHHhcCcchhhhhHHHHHHHHHHHHhccCCcee-----------ccccH---HHHHHHHHHHHh---ccccccc---
Confidence 456667889999999999999999884211111100 22232 445555555542 2233332
Q ss_pred HHHHHHHhcc-CcHHHHHHHHHHHHHHHHhcCCChHhHHHHHHHHhhcCChHHHHHHHHHHHHHHHhcChhHHHHhhhhH
Q 000156 368 LPVLLEKLKE-KKPTVAESLTQTLQAMHKAGCLNLVDVVEDVKTSVKNKVPLVRSLTLNWVTFCIETSSKAAVLKVHKDY 446 (2015)
Q Consensus 368 lp~LL~klkd-kk~~V~~aa~~aL~al~~~~~~~l~~il~~l~~~L~~Knp~vR~~~l~~L~~~l~~~~~~~l~~~l~~l 446 (2015)
.| --..||+.+.++|.++ .+-... -.++..++..+.+..|++|.+.+.-|..+ ...+.. ++.+
T Consensus 237 --------SDqVVAPVRETaAQtLGaL-~hLp~e-~~IL~qLV~~l~~~~WEVRHGGLLGLKYL-----~DLL~~-Ld~V 300 (800)
T 3oc3_A 237 --------DDRTVAPVRDAAAYLLSRI-YPLIGP-NDIIEQLVGFLDSGDWQVQFSGLIALGYL-----KEFVED-KDGL 300 (800)
T ss_dssp --------SSSCBCHHHHHHHHHHHHH-TTTSCS-CCHHHHHTTGGGCSCHHHHHHHHHHHHHT-----GGGCCC-HHHH
T ss_pred --------cCeeeeehHHHHHHHHHHH-HhCChh-HHHHHHHHhhcCCCCeeehhhhHHHHHHH-----HHHHHH-HHHH
Confidence 12 2457999999999999 661112 35666666667889999999988777655 222222 6889
Q ss_pred HHHHHHHhcCCCHHHHHHHHHHHHHHH
Q 000156 447 VPICMECLNDGTPEVRDAAFSVLAAIA 473 (2015)
Q Consensus 447 ~p~l~k~L~Ds~~~VR~aA~~al~~l~ 473 (2015)
+++++.+|.|.+.+||.+|+++|.-+.
T Consensus 301 v~aVL~GL~D~DDDVRAVAAetLiPIA 327 (800)
T 3oc3_A 301 CRKLVSLLSSPDEDIKLLSAELLCHFP 327 (800)
T ss_dssp HHHHHHHTTCSSHHHHHHHHHHHTTSC
T ss_pred HHHHHhhcCCcccHHHHHHHHHhhhhc
Confidence 999999999999999999999997776
No 76
>3l6x_A Catenin delta-1; catenin, armadillo, ARM, JMD, CE adhesion, complex, cell-CELL adhesion, ARVCF, delta-catenin DP120, JAC-1, cell membrane, membrane; 2.40A {Homo sapiens} PDB: 3l6y_A
Probab=96.91 E-value=0.47 Score=61.52 Aligned_cols=372 Identities=12% Similarity=0.050 Sum_probs=202.5
Q ss_pred hhHhhhcCCcHHHHHHHHHHHHHHHHHhchhhhhh--HHHHHHHHHHhhcCCChhHHHHHHHHHHHHHhh---hhh----
Q 000156 56 LFKKTVADSNAPVQDKALDALIAYLKAADADAGRY--AKEVCDAIAAKCLTGRPKTVEKAQAVFMLWVEL---EAV---- 126 (2015)
Q Consensus 56 ~~~k~v~DsN~~vqe~~leal~~~l~~~~~~~~~~--~~~v~~~LieK~l~~k~~~k~~a~~~ll~~~E~---~~~---- 126 (2015)
.+-.++...|..+|..|..+|..+...... .... -...+|.||+-.-...+.+++.|..+|..+... +.-
T Consensus 52 ~LV~~L~s~~~~~q~~Aa~~L~~La~~~~~-~k~~V~~~G~Ip~LV~LL~s~~~~vq~~Aa~AL~nLa~~~~~~nk~~I~ 130 (584)
T 3l6x_A 52 EVIAMLGFRLDAVKSNAAAYLQHLCYRNDK-VKTDVRKLKGIPVLVGLLDHPKKEVHLGACGALKNISFGRDQDNKIAIK 130 (584)
T ss_dssp HHHHHTTCSCHHHHHHHHHHHHHHHTTCHH-HHHHHHHTTHHHHHHHGGGCSSHHHHHHHHHHHHHHTSSSCHHHHHHHH
T ss_pred HHHHHHCCCCHHHHHHHHHHHHHHHcCChH-HHHHHHHcCCcHHHHHHHCCCCHHHHHHHHHHHHHHHccCCHHHHHHHH
Confidence 344667788999999999888766543222 1111 124678999874346899999999888888753 111
Q ss_pred -hhHHHHHHHHhhc-CChhhHHHHHHHHHHHHHHhCCCCcChhHHHhhhhhhh------------------cCCChhHHH
Q 000156 127 -DVFLDVMEKAIKN-KVAKAVVPAIDVMFQALSEFGAKIIPPKRILKMLPELF------------------DHQDQNVRA 186 (2015)
Q Consensus 127 -~~v~~~L~~~~~~-KnpKv~~~~l~~L~~~l~~fG~~~i~~k~il~~l~~ll------------------~~~d~~VR~ 186 (2015)
...++.|+..+.+ ..+.++..+..+|..+-...-.+..=++.-++.|..++ ...|..|+.
T Consensus 131 ~~GaIp~LV~LL~s~~~~~~~e~aa~aL~nLS~~~~~k~~I~~~alp~Lv~LL~~p~sg~~~~~~~~~k~~~~~d~~V~~ 210 (584)
T 3l6x_A 131 NCDGVPALVRLLRKARDMDLTEVITGTLWNLSSHDSIKMEIVDHALHALTDEVIIPHSGWEREPNEDCKPRHIEWESVLT 210 (584)
T ss_dssp HTTHHHHHHHHHHHCCSHHHHHHHHHHHHHHTTSGGGHHHHHHHTHHHHHHHTHHHHHCCC----------CCCCHHHHH
T ss_pred HcCCHHHHHHHHcCCCCHHHHHHHHHHHHHHhCCchhhHHHHhccHHHHHHHHhcccccccccccccccccccccHHHHH
Confidence 2346667777765 56777777776666543311111100122344454443 223679999
Q ss_pred HHHHHHHHHHHHhCCchhhHHHh--hhChHHHHHHHHHHHHhcCCCCCCCc----cchhhhhHhhhhhccccCCCCCCCC
Q 000156 187 SSKGLTLELCRWIGKDPVKTILF--EKMRDTMKKELEVELVNVSGTARPTR----KIRAEQDKELGQELISEDVGPGPSE 260 (2015)
Q Consensus 187 ~a~~l~~ely~~lG~~~l~~~l~--~~Lk~~q~keLe~~f~k~~~~~~P~R----~~rs~~~~~~~~ea~~~~~~~~~~~ 260 (2015)
.|..++..|-..- ++ .+..+. ..+-+..+.-|....++......-.+ .+|--.. ....+. .
T Consensus 211 nAa~~L~NLs~~~-~~-~R~~i~~~~Gli~~LV~~L~~~~~~~~~~~~~~enav~aL~NLs~-~~~~e~----~------ 277 (584)
T 3l6x_A 211 NTAGCLRNVSSER-SE-ARRKLRECDGLVDALIFIVQAEIGQKDSDSKLVENCVCLLRNLSY-QVHREI----P------ 277 (584)
T ss_dssp HHHHHHHHHTSSC-HH-HHHHHHHSTTHHHHHHHHHHHHHHTTCCSCHHHHHHHHHHHHHHT-THHHHS----T------
T ss_pred HHHHHHHHHhcCC-HH-HHHHHHHcCCcHHHHHHHHHHhhcccCccHHHHHHHHHHHHHhhc-cccccc----c------
Confidence 9988887775311 11 112221 23333334444333222110000000 0000000 000000 0
Q ss_pred CCCCCCCCCCCCCCCCCcccccccCcchhhhhhhccCChHHHHHHHHHHHHHhcCCC-CCCCChHHHHHHHHHHhc-ccC
Q 000156 261 ESTADVPPEIDEYELVDPVDILTPLEKSGFWEGVKATKWSERKDAVAELTKLASTKR-IAPGDFTEVCRTLKKLIT-DVN 338 (2015)
Q Consensus 261 ~~~~~~~~~iD~~dl~~~vdIl~kl~~~~f~~~l~s~kWkeR~eaL~~L~~l~~~~k-i~~~~y~~l~~~L~k~l~-D~N 338 (2015)
..+.| .+. .+ . +........++ +..-.-..+++.|...+. ..+
T Consensus 278 --------~~~~~--~~~------~~-~------------------~~~~~~~~~~~Gve~L~~~~~v~~Ll~LL~~s~~ 322 (584)
T 3l6x_A 278 --------QAERY--QEA------AP-N------------------VANNTGTSPARGYELLFQPEVVRIYISLLKESKT 322 (584)
T ss_dssp --------TCCC-----------------------------------------CCCCGGGGGGSHHHHHHHHHHHHHCCC
T ss_pred --------chhhh--hhh------cc-c------------------ccccccccCchhHHHHhcccHHHHHHHHHccCCC
Confidence 00001 000 00 0 00000111111 100001355677777886 557
Q ss_pred HHHHHHHHHHHHHHHHHhh---hcchhhh--HhHHHHHHHHhccCcHHHHHHHHHHHHHHHHhcCCCh-----HhHHHHH
Q 000156 339 IAVAVEAIQAIGNLARGLR---THFSGSS--RFLLPVLLEKLKEKKPTVAESLTQTLQAMHKAGCLNL-----VDVVEDV 408 (2015)
Q Consensus 339 ~~V~~~A~~~l~~La~~L~---~~f~~~~--~~llp~LL~klkdkk~~V~~aa~~aL~al~~~~~~~l-----~~il~~l 408 (2015)
..+...|+.+|..|+.+-. ..+...+ ...+|.|.+.+......|+.++..||..+... ... ...++.+
T Consensus 323 ~~v~E~Aa~AL~nL~ag~~~~~~~~~~~v~~~~glp~Lv~LL~s~~~~v~~~A~~aL~nLs~~--~~~~~~I~~g~ip~L 400 (584)
T 3l6x_A 323 PAILEASAGAIQNLCAGRWTYGRYIRSALRQEKALSAIADLLTNEHERVVKAASGALRNLAVD--ARNKELIGKHAIPNL 400 (584)
T ss_dssp HHHHHHHHHHHHHHHSSCSHHHHHHHHHHTSHHHHHHHHHGGGCSCHHHHHHHHHHHHHHHTT--CSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCccccHHHHHHHHHcCcHHHHHHHHcCCCHHHHHHHHHHHHHHhCC--hhHHHHHHhCCHHHH
Confidence 8899999999999986421 1222222 36699999999999999999999999999875 222 2346777
Q ss_pred HHHhhcC--------ChHHHHHHHHHHHHHHHhcChhHHHHh-hhhHHHHHHHHhcCC--CHHHHHHHHHHHHHHHHHhC
Q 000156 409 KTSVKNK--------VPLVRSLTLNWVTFCIETSSKAAVLKV-HKDYVPICMECLNDG--TPEVRDAAFSVLAAIAKSVG 477 (2015)
Q Consensus 409 ~~~L~~K--------np~vR~~~l~~L~~~l~~~~~~~l~~~-l~~l~p~l~k~L~Ds--~~~VR~aA~~al~~l~~~~G 477 (2015)
...|.+. +..+...++..|..++...+.. .... -...+|.|+.++.+. .+.++++|..+|..++ .
T Consensus 401 V~LL~~~~~~~~~~~s~~v~~~a~~tL~NL~a~~~~~-~~~I~~~g~I~~Lv~LL~s~~~~~~v~k~Aa~vL~nl~---~ 476 (584)
T 3l6x_A 401 VKNLPGGQQNSSWNFSEDTVISILNTINEVIAENLEA-AKKLRETQGIEKLVLINKSGNRSEKEVRAAALVLQTIW---G 476 (584)
T ss_dssp HHTSSSSSCSGGGTCCHHHHHHHHHHHHHHHTTCHHH-HHHHHHTTHHHHHHHHHTCSSSCHHHHHHHHHHHHHHH---T
T ss_pred HHHhcCCcccccccchHHHHHHHHHHHHHHhcCCHHH-HHHHHHCCChHHHHHHHhCCCCChHHHHHHHHHHHHHH---c
Confidence 7777654 3467777888887766543322 1111 135789999999876 7888888887776554 5
Q ss_pred chHHH
Q 000156 478 MRPLE 482 (2015)
Q Consensus 478 e~~~~ 482 (2015)
.+.+.
T Consensus 477 ~~elr 481 (584)
T 3l6x_A 477 YKELR 481 (584)
T ss_dssp SHHHH
T ss_pred CHHHH
Confidence 55443
No 77
>3a6p_A Exportin-5; exportin-5, RANGTP, nuclearexport, importin-BE family, nucleus, phosphoprotein, protein transport; HET: GTP; 2.92A {Homo sapiens}
Probab=96.91 E-value=3.5 Score=58.59 Aligned_cols=202 Identities=10% Similarity=0.039 Sum_probs=117.6
Q ss_pred ChHHHHHHHHHHHHHHHhccccC-CCCChhhHHHHHHhcc---ccchHHHHHHHHHHHHHHHHHhChhhHHhhhHHHHHH
Q 000156 866 DWKVRLESIEAVNKILEEANKRI-QPAGTGELFGGLRGRL---YDSNKNLVMATLITLGAVASAMGPAVEKSSKGVLSDI 941 (2015)
Q Consensus 866 ~Wk~R~eale~L~~ll~~a~~~I-~~~~~~eL~~~L~~rL---~DsN~~V~~~Al~~l~~La~alg~~f~~~~~~llp~l 941 (2015)
.|..+......++.++....... .+.....++..|...+ ...+..++..++.+++.+..-+... ..++..++..|
T Consensus 499 ~~~~~ea~~~~leav~~~~~~~~e~~~l~~~~~~~Ll~~ll~~~~~~p~l~~~~i~~l~~l~~~~~~~-p~~L~~vL~~l 577 (1204)
T 3a6p_A 499 SFVQWEAMTLFLESVITQMFRTLNREEIPVNDGIELLQMVLNFDTKDPLILSCVLTNVSALFPFVTYR-PEFLPQVFSKL 577 (1204)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHSCTTCCCHHHHHHHHHHHHHCCCSCHHHHHHHHHHHHHHGGGGGTC-GGGHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhcccccccccHHHHHHHHHHHHhCCCCChHHHHHHHHHHHHHHHHHhcC-chHHHHHHHHH
Confidence 57777666666666665431111 1222112333333332 3457778899999998877655321 24677777777
Q ss_pred HHHhCC------------CcHHHHHHHHHHHHHHHHhcC--c----hhhHHHHHHHHhcCC-CChhHHHHHHHHHHHHhc
Q 000156 942 LKCLGD------------NKKHMRECTLTVLDAWLAAVH--L----DKMVPYVTTALTDAK-LGAEGRKDLFDWLSKQLT 1002 (2015)
Q Consensus 942 l~~L~D------------~k~~Vr~aa~~aL~~i~~~~g--l----~~ll~~l~~~L~~~k-~~p~~R~~~l~~L~~~l~ 1002 (2015)
+..+.+ ..+.||.+|..++..++..++ + +.+...+...+.... .+...+..+...+.-.-.
T Consensus 578 l~~l~~~~~~~~~~~~~~~~k~vr~~a~~al~~L~~~~~~~L~p~~~~i~~~~~~~l~~~~~l~~~e~~~L~eal~~ia~ 657 (1204)
T 3a6p_A 578 FSSVTFETVEESKAPRTRAVRNVRRHACSSIIKMCRDYPQLVLPNFDMLYNHVKQLLSNELLLTQMEKCALMEALVLISN 657 (1204)
T ss_dssp HHHHHCCTTCSTTSCCCHHHHHHHHHHHHHHHHHHHHCHHHHGGGHHHHHHHHHHHHHSTTTSCHHHHHHHHHHHHHHHG
T ss_pred HHhhccCCcccccccccHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhCcccccHHHHHHHHHHHHHHhc
Confidence 777766 456899999999999999885 2 333334444454333 334556666666543311
Q ss_pred cCCCC---CC-hhhhHHHHHhhcCCCChHHHHHHHHHHHHHHHHcChhHHHHHhccCChHHH--H-------HHHHHHhh
Q 000156 1003 GLSGF---PD-AAHLLKPASIAMTDKSSDVRKAAEACIVEILRAGGQETIEKNLKDIQGPAL--A-------LILERIKL 1069 (2015)
Q Consensus 1003 ~~~~~---~~-~~~ll~pl~~~L~D~~~~VR~aA~~~L~~l~~~~G~~~~~~~l~~L~~~~~--~-------~i~~~l~k 1069 (2015)
..+.. .. +..++.|++..+.+ ++++. +......|+..+|-+....+....++..+ . .+...+++
T Consensus 658 ~~~~~~~~~~~l~~ll~P~~~~w~~--~~~~~-~~s~~~~f~~~~G~~~~~~~~~~~d~~~~~r~~l~~~~~~l~~~l~r 734 (1204)
T 3a6p_A 658 QFKNYERQKVFLEELMAPVASIWLS--QDMHR-VLSDVDAFIAYVGTDQKSCDPGLEDPCGLNRARMSFCVYSILGVVKR 734 (1204)
T ss_dssp GGCCHHHHHHHHHHHHHHHHHHHSC--HHHHH-HHHCHHHHHHHHTSSCC--CTTCCTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHcc--HHHHH-hhcCHHHHHHHhCCCCCcccccccchhhhhHHHHHHHHHHHHHHHHH
Confidence 12221 22 56677888887764 34555 34444788888887766555555554322 3 56667777
Q ss_pred cc
Q 000156 1070 NG 1071 (2015)
Q Consensus 1070 ~~ 1071 (2015)
.+
T Consensus 735 ~~ 736 (1204)
T 3a6p_A 735 TC 736 (1204)
T ss_dssp CC
T ss_pred hc
Confidence 53
No 78
>1xqr_A HSPBP1 protein; armadillo repeat, superhelical twist, chaperone; 2.10A {Homo sapiens} SCOP: a.118.1.21 PDB: 1xqs_A*
Probab=96.85 E-value=0.0058 Score=72.97 Aligned_cols=169 Identities=13% Similarity=0.124 Sum_probs=120.2
Q ss_pred HHHHHHHHHHHHHHHhcc--ccCCCCChhhHHHHHHh-ccccchHHHHHHHHHHHHHHHHHhChhhHHhh--hHHHHHHH
Q 000156 868 KVRLESIEAVNKILEEAN--KRIQPAGTGELFGGLRG-RLYDSNKNLVMATLITLGAVASAMGPAVEKSS--KGVLSDIL 942 (2015)
Q Consensus 868 k~R~eale~L~~ll~~a~--~~I~~~~~~eL~~~L~~-rL~DsN~~V~~~Al~~l~~La~alg~~f~~~~--~~llp~ll 942 (2015)
..|..|++.|..++..-. ..+.. .| .++.|.. .|...+..|+..|+.+|+.++.. .+.....+ ...+|.|+
T Consensus 55 e~k~~Al~~L~~lv~~~dna~~~~~--~G-~l~~Lv~~lL~s~~~~vr~~Aa~~Lg~ia~~-n~~~~~~vv~~g~l~~Ll 130 (296)
T 1xqr_A 55 QEREGALELLADLCENMDNAADFCQ--LS-GMHLLVGRYLEAGAAGLRWRAAQLIGTCSQN-VAAIQEQVLGLGALRKLL 130 (296)
T ss_dssp HHHHHHHHHHHHHHTSHHHHHHHHH--TT-HHHHHHHTTTTCSSHHHHHHHHHHHHHHHTT-CHHHHHHHHHTTHHHHHH
T ss_pred HHHHHHHHHHHHHHhChhhHHHHHH--cC-CHHHHHHHHHcCCCHHHHHHHHHHHHHHHhC-CHHHHHHHHHCCCHHHHH
Confidence 468889999999886210 11110 12 3466777 88889999999999999998853 23333332 25889999
Q ss_pred HHhC-CCcHHHHHHHHHHHHHHHHhcC--c-----hhhHHHHHHHHhcCCCChhHHHHHHHHHHHHhccCCCC-CCh--h
Q 000156 943 KCLG-DNKKHMRECTLTVLDAWLAAVH--L-----DKMVPYVTTALTDAKLGAEGRKDLFDWLSKQLTGLSGF-PDA--A 1011 (2015)
Q Consensus 943 ~~L~-D~k~~Vr~aa~~aL~~i~~~~g--l-----~~ll~~l~~~L~~~k~~p~~R~~~l~~L~~~l~~~~~~-~~~--~ 1011 (2015)
..|. +.+..+|..|.-||..++.... . ...+|.+...|.++ ++.+|..++..|.......... ..+ .
T Consensus 131 ~LL~~~~~~~v~~~A~~ALsnl~~~~~~~~~~~~~~ggi~~L~~lL~~~--d~~v~~~A~~aLs~L~~~~~~~~~~vv~~ 208 (296)
T 1xqr_A 131 RLLDRDACDTVRVKALFAISCLVREQEAGLLQFLRLDGFSVLMRAMQQQ--VQKLKVKSAFLLQNLLVGHPEHKGTLCSM 208 (296)
T ss_dssp HHHHHCSCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHHHHHHSS--CHHHHHHHHHHHHHHHHHCGGGHHHHHHT
T ss_pred HHHccCCCHHHHHHHHHHHHHHHcCCcHHHHHHHHCCCHHHHHHHHcCC--CHHHHHHHHHHHHHHHhCChHHHHHHHHc
Confidence 9998 4588999999999999885432 1 23577888888876 5788888877776544432111 111 2
Q ss_pred hhHHHHHhhcCCCChHHHHHHHHHHHHHHHH
Q 000156 1012 HLLKPASIAMTDKSSDVRKAAEACIVEILRA 1042 (2015)
Q Consensus 1012 ~ll~pl~~~L~D~~~~VR~aA~~~L~~l~~~ 1042 (2015)
..+++++..|.+.+.+||..|..+|..+...
T Consensus 209 g~i~~Lv~LL~~~d~~v~~~al~aL~~l~~~ 239 (296)
T 1xqr_A 209 GMVQQLVALVRTEHSPFHEHVLGALCSLVTD 239 (296)
T ss_dssp THHHHHHHHHTSCCSTHHHHHHHHHHHHHTT
T ss_pred CCHHHHHHHHcCCChhHHHHHHHHHHHHHhC
Confidence 4667799999999999999999999988866
No 79
>1te4_A Conserved protein MTH187; methanobacterium thermoautotrophicum, structural proteomics, heat-like repeat; NMR {Methanothermobacterthermautotrophicus} SCOP: a.118.1.16
Probab=96.82 E-value=0.00015 Score=75.76 Aligned_cols=119 Identities=15% Similarity=0.068 Sum_probs=86.9
Q ss_pred HHHHHHHHHhcccCHHHHHHHHHHHHHHHHHhhhcchhhhHhHHHHHHHHhccCcHHHHHHHHHHHHHHHHhcCCChHhH
Q 000156 325 EVCRTLKKLITDVNIAVAVEAIQAIGNLARGLRTHFSGSSRFLLPVLLEKLKEKKPTVAESLTQTLQAMHKAGCLNLVDV 404 (2015)
Q Consensus 325 ~l~~~L~k~l~D~N~~V~~~A~~~l~~La~~L~~~f~~~~~~llp~LL~klkdkk~~V~~aa~~aL~al~~~~~~~l~~i 404 (2015)
.-...|...+.|.+..++..|+.+|+.+. . + . ++.|++.++|+.+.||..+..+|..+. -...
T Consensus 12 ~~~~~l~~~L~~~~~~vR~~A~~~L~~~~----~---~---~-~~~L~~~L~d~~~~vR~~A~~aL~~~~------~~~a 74 (131)
T 1te4_A 12 SGLVPRGSHMADENKWVRRDVSTALSRMG----D---E---A-FEPLLESLSNEDWRIRGAAAWIIGNFQ------DERA 74 (131)
T ss_dssp ---------CCSSCCCSSSSCCSSTTSCS----S---T---T-HHHHHHGGGCSCHHHHHHHHHHHGGGC------SHHH
T ss_pred ccHHHHHHHhcCCCHHHHHHHHHHHHHhC----c---h---H-HHHHHHHHcCCCHHHHHHHHHHHHhcC------CHHH
Confidence 44566777788888888888877776542 1 1 1 588999999999999998877776442 2467
Q ss_pred HHHHHHHhhcCChHHHHHHHHHHHHHHHhcChhHHHHhhhhHHHHHHHHhcCCCHHHHHHHHHHHHH
Q 000156 405 VEDVKTSVKNKVPLVRSLTLNWVTFCIETSSKAAVLKVHKDYVPICMECLNDGTPEVRDAAFSVLAA 471 (2015)
Q Consensus 405 l~~l~~~L~~Knp~vR~~~l~~L~~~l~~~~~~~l~~~l~~l~p~l~k~L~Ds~~~VR~aA~~al~~ 471 (2015)
++.+...+++.+|.||..++..|..+- -+..++.|.+.+.|.++.||.+|..+|+.
T Consensus 75 ~~~L~~~L~d~~~~VR~~A~~aL~~~~-----------~~~a~~~L~~~l~d~~~~vr~~A~~aL~~ 130 (131)
T 1te4_A 75 VEPLIKLLEDDSGFVRSGAARSLEQIG-----------GERVRAAMEKLAETGTGFARKVAVNYLET 130 (131)
T ss_dssp HHHHHHHHHHCCTHHHHHHHHHHHHHC-----------SHHHHHHHHHHTTSCCTHHHHHHHHHGGG
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHhC-----------cHHHHHHHHHHHhCCCHHHHHHHHHHHHh
Confidence 888889999999999999998887641 13457889999999999999999998864
No 80
>3opb_A SWI5-dependent HO expression protein 4; heat and arm fold, myosin folding and function, myosin bindi protein, protein binding; 2.90A {Saccharomyces cerevisiae}
Probab=96.68 E-value=0.11 Score=68.83 Aligned_cols=363 Identities=13% Similarity=0.103 Sum_probs=197.6
Q ss_pred HHHHhhhccCCHHHHHHHHHHHHHHHHhccccc----hHHHHHHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHcCCCch
Q 000156 604 ADTVGQLKSAVWKERLEAISSLRQQVEAVQNLD----QSVEILVRLVCMLPGWSEKNVQVQQQVIEVINYLAATATKFPK 679 (2015)
Q Consensus 604 ~~l~~~L~s~~Wk~Rl~a~e~L~~~v~~~~~~~----~~~~~Lv~~L~~~pg~~DsN~qV~~~~Le~l~~l~~~~~~~~~ 679 (2015)
+-+.+.+.+. ..|.-|.-.|.++....+... ...+.+.++|.. .....++.+++.|.++... +.. +
T Consensus 299 ~~L~~~l~~~--~ir~lAavvL~KL~~~~~~~~~si~~La~~~~~~L~~------~~~~~~~~AvEgLaYLSl~-~~V-K 368 (778)
T 3opb_A 299 QLLERSLNVE--DVQIYSALVLVKTWSFTKLTCINLKQLSEIFINAISR------RIVPKVEMSVEALAYLSLK-ASV-K 368 (778)
T ss_dssp HHHHHHTTSG--GGHHHHHHHHHHHTGGGTCTTCCHHHHHHHHHHHTTT------CCHHHHHHHHHHHHHHTTS-SHH-H
T ss_pred HHHHHHhccH--HHHHHHHHHHHHHhcCCCCCcCcHHHHHHHHHHHHhc------CCccHHHHHHHHHHHHhCC-HHH-H
Confidence 3444444442 667777777877765532211 123445555532 1112267788888766432 111 1
Q ss_pred hHH---HHHHHHHHhhhcchhhhHHHHHHHHHHHhhhC--h-----hHHHHHHHHHhhhCCChhHHH---------HHHH
Q 000156 680 KCV---VLCLLGISERVADIKTRAHAMKCLTTFSEAVG--P-----GFIFERLYKIMKDHKNPKVLS---------EGIL 740 (2015)
Q Consensus 680 ~~~---~~il~~LveKlgD~K~r~~a~~~L~~l~e~~~--~-----~~Vl~~L~~~l~~~KnpKv~~---------~~l~ 740 (2015)
..+ ..++..|++-+.+.........++..++.... + +.-+.+|.+++ +++.|+... +...
T Consensus 369 e~L~~d~~~L~~Lv~llk~~~d~s~~Ygal~IL~NLt~~~~~~~~e~~~l~~Lk~~A-~~~~p~~~~~d~~~~~~~~v~~ 447 (778)
T 3opb_A 369 IMIRSNESFTEILLTMIKSQKMTHCLYGLLVIMANLSTLPEEXXXXXXXXXXXXXXX-XXXXPAADKVGAEKAAKEDILL 447 (778)
T ss_dssp HHHHHCHHHHHHHHHHHTTTCCTTHHHHHHHHHHHTTCCCCCCCCCCC-------------------CCTHHHHHHHHHH
T ss_pred HHHHhCHHHHHHHHHHHhCCCCchHHHHHHHHHHHhcCCCcccchhhhhhhhhhhhc-cccCcccCcccccccchHHHHH
Confidence 111 33566666665542222334444444443221 1 12345555544 222333221 1111
Q ss_pred HHHHHHHHhCCCCCChhhHHHHHHhcCCCCCchhHHHHHHHHHHHHHHHhChhHHhhhhhccHHHHHHHHHHHhcCCCCC
Q 000156 741 WMVSAVEDFGVSHLKLKDLIDFCKDTGLQSSAAATRNATIKLLGALHKFVGPDIKGFLADVKPALLSALDAEYEKNPFEG 820 (2015)
Q Consensus 741 ~L~~li~~fG~~~l~~k~li~~l~~~gL~~sn~~VR~aA~~ll~~Ly~~~G~~l~~~L~~lkp~ll~~Le~ef~k~~~~~ 820 (2015)
+-..++-+. .+++.+..+ +.+.++.+|..|..++..|... +..+..+-. ++
T Consensus 448 ~~~~~l~ea--------GvIp~Lv~L-l~S~s~~~re~A~~aL~nLS~d--~~~R~~lvq------------------qG 498 (778)
T 3opb_A 448 FNEKYILRT--------ELISFLKRE-MHNLSPNCKQQVVRIIYNITRS--KNFIPQLAQ------------------QG 498 (778)
T ss_dssp HHHHHTTTT--------THHHHHHHH-GGGSCHHHHHHHHHHHHHHHTS--GGGHHHHHH------------------TT
T ss_pred HHHHHHHHC--------cCHHHHHHH-HcCCCHHHHHHHHHHHHHHcCC--HHHHHHHHH------------------CC
Confidence 122222222 256666677 8888999999999998887522 222222200 00
Q ss_pred CCCCcccccCccccCCCCCCCCCCCCCcccccccchHHHHhcCCCCh---HHHHHHHHHHHHHHHhccccCCC--CChhh
Q 000156 821 TVVPKKTVRASESTSSVSSGGSDGLPREDISGKFTPTLVKSLESPDW---KVRLESIEAVNKILEEANKRIQP--AGTGE 895 (2015)
Q Consensus 821 ~p~p~R~~r~~~~~~s~~~~~~d~lprvdIs~~L~~~ll~~l~d~~W---k~R~eale~L~~ll~~a~~~I~~--~~~~e 895 (2015)
..+.++..+.+... ..|..|...|..++...++.+.. ....+
T Consensus 499 ---------------------------------al~~LL~lL~s~~~~~~~~k~~AA~ALArLlis~np~~~f~~~~~~~ 545 (778)
T 3opb_A 499 ---------------------------------AVKIILEYLANKQDIGEPIRILGCRALTRMLIFTNPGLIFKKYSALN 545 (778)
T ss_dssp ---------------------------------HHHHHHHHTTCC---CCHHHHHHHHHHHHHHHTSCHHHHSSSSCSTT
T ss_pred ---------------------------------CHHHHHHHHhcCCCcchHHHHHHHHHHHHHHhcCCHHHHcCCCcccc
Confidence 01123333333321 36889999999998654433321 11126
Q ss_pred HHHHHHhccc-cchH-------------HHHHHHHHHHHHHHHHhC---hhhH-Hhhh--HHHHHHHHHhCCCcHHHHHH
Q 000156 896 LFGGLRGRLY-DSNK-------------NLVMATLITLGAVASAMG---PAVE-KSSK--GVLSDILKCLGDNKKHMREC 955 (2015)
Q Consensus 896 L~~~L~~rL~-DsN~-------------~V~~~Al~~l~~La~alg---~~f~-~~~~--~llp~ll~~L~D~k~~Vr~a 955 (2015)
.++.|...|. +... .-+..|+.+|..||..-+ .+.. ..++ ..+|.+...+.+.+..||.+
T Consensus 546 aI~pLv~LL~~~~~~~~~~l~~~~~~~~l~~feAL~ALTNLAs~~~n~~E~~r~~Ii~~~ga~~~L~~LL~s~n~~VrrA 625 (778)
T 3opb_A 546 AIPFLFELLPRSTPVDDNPLHNDEQIKLTDNYEALLALTNLASSETSDGEEVCKHIVSTKVYWSTIENLMLDENVPLQRS 625 (778)
T ss_dssp HHHHHHHTSCCSSSCSSCC---CCCCCHHHHHHHHHHHHHHHHCCSHHHHHHHHHHHHSHHHHHHHHHGGGCSSHHHHHH
T ss_pred chHHHHHHcCCCCCcccccccccccccHHHHHHHHHHHHHHhcCCcccchHHHHHHHHhcCHHHHHHHHHhCCCHHHHHH
Confidence 7888888886 2221 126689999999987543 2332 3444 47899999999999999999
Q ss_pred HHHHHHHHHHhcC-c-hhh-----------HHHHHHHHhcCCCChhHHHHHHHHHHHHhccCCCC----CChhhhHHHHH
Q 000156 956 TLTVLDAWLAAVH-L-DKM-----------VPYVTTALTDAKLGAEGRKDLFDWLSKQLTGLSGF----PDAAHLLKPAS 1018 (2015)
Q Consensus 956 a~~aL~~i~~~~g-l-~~l-----------l~~l~~~L~~~k~~p~~R~~~l~~L~~~l~~~~~~----~~~~~ll~pl~ 1018 (2015)
|.+++..++.... + ..+ ++.+...+... +...|..+...|+-.-...+.. -.....+..++
T Consensus 626 A~elI~NL~~~~e~i~~k~~~~~~~~~~~rL~lLV~Ll~s~--D~~~r~AAagALAnLts~~~~ia~~ll~~~~gi~~Ll 703 (778)
T 3opb_A 626 TLELISNMMSHPLTIAAKFFNLENPQSLRNFNILVKLLQLS--DVESQRAVAAIFANIATTIPLIAKELLTKKELIENAI 703 (778)
T ss_dssp HHHHHHHHHTSGGGTGGGTSCCSSHHHHHHHHHHHHGGGCS--CHHHHHHHHHHHHHHHHHCHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHHhCCcHHHHHHHHhhcCchhhccHHHHHHHHcCC--CHHHHHHHHHHHHHhcCCChHHHHHHHHccccHHHHH
Confidence 9999999996542 2 233 44566666654 5788888876666432222210 11134666788
Q ss_pred hhcCC--CChHHHHHHHHHHHHHHH
Q 000156 1019 IAMTD--KSSDVRKAAEACIVEILR 1041 (2015)
Q Consensus 1019 ~~L~D--~~~~VR~aA~~~L~~l~~ 1041 (2015)
..|.| .+.++|..+..++..+..
T Consensus 704 ~lL~~~~~~~~l~~R~~~~l~NL~~ 728 (778)
T 3opb_A 704 QVFADQIDDIELRQRLLMLFFGLFE 728 (778)
T ss_dssp HHHHHTTTCHHHHHHHHHHHHHHHT
T ss_pred HHHhccCCCHHHHHHHHHHHHHHHH
Confidence 88888 899999999999998886
No 81
>1vsy_5 Proteasome activator BLM10; 20S proteasome BLM10, hydrolase, nucleus, phosphoprotein, PR proteasome, threonine protease; 3.00A {Saccharomyces cerevisiae} PDB: 3l5q_6
Probab=96.64 E-value=3.5 Score=56.96 Aligned_cols=171 Identities=15% Similarity=0.124 Sum_probs=108.5
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHhc----ccCHHHHHHHHHHHH--HHHHHhhhcchhhhHhHHHHHHH
Q 000156 300 SERKDAVAELTKLASTKRIAPGDFTEVCRTLKKLIT----DVNIAVAVEAIQAIG--NLARGLRTHFSGSSRFLLPVLLE 373 (2015)
Q Consensus 300 keR~eaL~~L~~l~~~~ki~~~~y~~l~~~L~k~l~----D~N~~V~~~A~~~l~--~La~~L~~~f~~~~~~llp~LL~ 373 (2015)
+.|+.|=..|....+ ..++.|..+++.+.+.+. +.+..-...|+-+|. .+...+..++ .+...+++.|+.
T Consensus 148 ~VR~~AQ~~L~~~~~---~~~gs~~~iip~ll~~L~~~~~~~~~~~iKGaLy~L~~k~~~~~~~~d~-~~~~~~~~ali~ 223 (997)
T 1vsy_5 148 DIYKPAQGTLVHCMK---QLVGSYGVVINKIIPSLEKAIKDHDYMKIQVILNVLLIKKIHRKLMTDY-KDIGRLIFLLIE 223 (997)
T ss_dssp HHHHHHHHHHHHHHT---TBTTHHHHHHHHHHHHHHHHHHTCSCHHHHHHHHHTTSHHHHHHGGGCH-HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH---hcccHHHHHHHHHHHHHhccccCCCHHHHHHHHHHHhhhhhhhHHhcCh-HHHHHHHHHHHH
Confidence 467777777776653 345667777766666553 556666777877665 4555555444 568899999999
Q ss_pred HhccCcHHHHHHHHHHHHHHHHhcCCC--------------------------------------hH----hHHHHHHHH
Q 000156 374 KLKEKKPTVAESLTQTLQAMHKAGCLN--------------------------------------LV----DVVEDVKTS 411 (2015)
Q Consensus 374 klkdkk~~V~~aa~~aL~al~~~~~~~--------------------------------------l~----~il~~l~~~ 411 (2015)
.....|+.|+.-+..+...+......+ .. .+...++..
T Consensus 224 ~~~~dKpsI~~l~~~l~~~i~~~~~~p~~~~~~~~~~~~~i~~~d~~i~~~~~~~~~~~~~~r~~~~~~~~~L~~~l~~~ 303 (997)
T 1vsy_5 224 CCRVNELEIGMYADKILTDIVIGIKIPSSVCVISDQAFLPLAPPDGTINLQVEAVKLAKKKKREYYLSLLVDLQDKLLDK 303 (997)
T ss_dssp TCSCSSSSTTTHHHHHHHHHHTSCCCCCSCCCCCGGGTGGGCCSCSSTTSHHHHHHHHTTHHHHHHHHHHHHHHHHHHHH
T ss_pred hCcCCCHHHHHHHHHHHHHHHhcccCchHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 998889988887777777666541100 00 111111222
Q ss_pred h-hcCC--hHHHHHHHHHHHHHHHhcChhHHHHhhhhHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhCc
Q 000156 412 V-KNKV--PLVRSLTLNWVTFCIETSSKAAVLKVHKDYVPICMECLNDGTPEVRDAAFSVLAAIAKSVGM 478 (2015)
Q Consensus 412 L-~~Kn--p~vR~~~l~~L~~~l~~~~~~~l~~~l~~l~p~l~k~L~Ds~~~VR~aA~~al~~l~~~~Ge 478 (2015)
+ .+.. |....-++.+|..++.+... ..-+.++..+++.+.|.+|.+|..|..++..++..+-.
T Consensus 304 ~~~~~h~~Wk~~~~~~~~l~~l~~r~d~----~~~~~~v~~~~~~l~~dhp~~R~~a~~~l~~il~~~k~ 369 (997)
T 1vsy_5 304 LDNEKDMGWKIRMFILRFVTQIQSNLES----KPDKRAVFSIISQISTKHPEIIHLVVKSLLSTCNKIIS 369 (997)
T ss_dssp HHSSTTCCSCHHHHHHHHHHHHTCCSSC----CCCHHHHHHHHGGGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred hccCCChhHHHHHHHHHHHHHHHhcCCC----CCCHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHh
Confidence 2 1233 66666655554443322211 11256788899999999999999999999888766543
No 82
>3l6x_A Catenin delta-1; catenin, armadillo, ARM, JMD, CE adhesion, complex, cell-CELL adhesion, ARVCF, delta-catenin DP120, JAC-1, cell membrane, membrane; 2.40A {Homo sapiens} PDB: 3l6y_A
Probab=96.51 E-value=0.28 Score=63.69 Aligned_cols=346 Identities=10% Similarity=0.060 Sum_probs=192.4
Q ss_pred HHHHHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHcCCCchhHH--HHHHHHHHhhhcc--hhhhHHHHHHHHHHHhhhC
Q 000156 639 VEILVRLVCMLPGWSEKNVQVQQQVIEVINYLAATATKFPKKCV--VLCLLGISERVAD--IKTRAHAMKCLTTFSEAVG 714 (2015)
Q Consensus 639 ~~~Lv~~L~~~pg~~DsN~qV~~~~Le~l~~l~~~~~~~~~~~~--~~il~~LveKlgD--~K~r~~a~~~L~~l~e~~~ 714 (2015)
...++.+|. ..+..++..+...|..++..... .+..+ .-.||.||.-|.. ..++..|..+|..++...+
T Consensus 50 i~~LV~~L~------s~~~~~q~~Aa~~L~~La~~~~~-~k~~V~~~G~Ip~LV~LL~s~~~~vq~~Aa~AL~nLa~~~~ 122 (584)
T 3l6x_A 50 LPEVIAMLG------FRLDAVKSNAAAYLQHLCYRNDK-VKTDVRKLKGIPVLVGLLDHPKKEVHLGACGALKNISFGRD 122 (584)
T ss_dssp HHHHHHHTT------CSCHHHHHHHHHHHHHHHTTCHH-HHHHHHHTTHHHHHHHGGGCSSHHHHHHHHHHHHHHTSSSC
T ss_pred HHHHHHHHC------CCCHHHHHHHHHHHHHHHcCChH-HHHHHHHcCCcHHHHHHHCCCCHHHHHHHHHHHHHHHccCC
Confidence 556666653 23456667677777766642111 11222 1257888887755 5688899999998875211
Q ss_pred hh---H-----HHHHHHHHhhhCCChhHHHHHHHHHHHHHHHhCCC-CC---ChhhHHHHHH--hcCC-----------C
Q 000156 715 PG---F-----IFERLYKIMKDHKNPKVLSEGILWMVSAVEDFGVS-HL---KLKDLIDFCK--DTGL-----------Q 769 (2015)
Q Consensus 715 ~~---~-----Vl~~L~~~l~~~KnpKv~~~~l~~L~~li~~fG~~-~l---~~k~li~~l~--~~gL-----------~ 769 (2015)
.+ . .++.|+..+....++.++..+...|.++-..-... .+ -+..|+..+. ..|. .
T Consensus 123 ~~nk~~I~~~GaIp~LV~LL~s~~~~~~~e~aa~aL~nLS~~~~~k~~I~~~alp~Lv~LL~~p~sg~~~~~~~~~k~~~ 202 (584)
T 3l6x_A 123 QDNKIAIKNCDGVPALVRLLRKARDMDLTEVITGTLWNLSSHDSIKMEIVDHALHALTDEVIIPHSGWEREPNEDCKPRH 202 (584)
T ss_dssp HHHHHHHHHTTHHHHHHHHHHHCCSHHHHHHHHHHHHHHTTSGGGHHHHHHHTHHHHHHHTHHHHHCCC----------C
T ss_pred HHHHHHHHHcCCHHHHHHHHcCCCCHHHHHHHHHHHHHHhCCchhhHHHHhccHHHHHHHHhcccccccccccccccccc
Confidence 11 1 35666666654567777777665555553210000 00 1233444331 0011 2
Q ss_pred CCchhHHHHHHHHHHHHHHHhChhHHhhh---hhccHHHHHHHHHHHhcCCCCCCCCCcccccCccccCCCCCCCCCCCC
Q 000156 770 SSAAATRNATIKLLGALHKFVGPDIKGFL---ADVKPALLSALDAEYEKNPFEGTVVPKKTVRASESTSSVSSGGSDGLP 846 (2015)
Q Consensus 770 ~sn~~VR~aA~~ll~~Ly~~~G~~l~~~L---~~lkp~ll~~Le~ef~k~~~~~~p~p~R~~r~~~~~~s~~~~~~d~lp 846 (2015)
..+..|+..|..+|..|... ++..+..+ +.+.+.++..|.....+....
T Consensus 203 ~~d~~V~~nAa~~L~NLs~~-~~~~R~~i~~~~Gli~~LV~~L~~~~~~~~~~--------------------------- 254 (584)
T 3l6x_A 203 IEWESVLTNTAGCLRNVSSE-RSEARRKLRECDGLVDALIFIVQAEIGQKDSD--------------------------- 254 (584)
T ss_dssp CCCHHHHHHHHHHHHHHTSS-CHHHHHHHHHSTTHHHHHHHHHHHHHHTTCCS---------------------------
T ss_pred cccHHHHHHHHHHHHHHhcC-CHHHHHHHHHcCCcHHHHHHHHHHhhcccCcc---------------------------
Confidence 23578999999998887532 22222222 455667777776554322110
Q ss_pred CcccccccchHHHHhcCCCChHHHHHHHHHHHHHH-------------------------HhccccCCCCChhhHHHHHH
Q 000156 847 REDISGKFTPTLVKSLESPDWKVRLESIEAVNKIL-------------------------EEANKRIQPAGTGELFGGLR 901 (2015)
Q Consensus 847 rvdIs~~L~~~ll~~l~d~~Wk~R~eale~L~~ll-------------------------~~a~~~I~~~~~~eL~~~L~ 901 (2015)
.+....|+-.|..+. ....+.+..-.-...+..|.
T Consensus 255 --------------------~~~~enav~aL~NLs~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~Gve~L~~~~~v~~Ll 314 (584)
T 3l6x_A 255 --------------------SKLVENCVCLLRNLSYQVHREIPQAERYQEAAPNVANNTGTSPARGYELLFQPEVVRIYI 314 (584)
T ss_dssp --------------------CHHHHHHHHHHHHHHTTHHHHSTTCCC--------------CCCCGGGGGGSHHHHHHHH
T ss_pred --------------------HHHHHHHHHHHHHhhccccccccchhhhhhhcccccccccccCchhHHHHhcccHHHHHH
Confidence 000001111111111 00011111100124567777
Q ss_pred hcccc-chHHHHHHHHHHHHHHHHHhCh---hhHHhh--hHHHHHHHHHhCCCcHHHHHHHHHHHHHHHHhcCch-----
Q 000156 902 GRLYD-SNKNLVMATLITLGAVASAMGP---AVEKSS--KGVLSDILKCLGDNKKHMRECTLTVLDAWLAAVHLD----- 970 (2015)
Q Consensus 902 ~rL~D-sN~~V~~~Al~~l~~La~alg~---~f~~~~--~~llp~ll~~L~D~k~~Vr~aa~~aL~~i~~~~gl~----- 970 (2015)
..|.+ .+..+...|+.+|..|+..-++ .+...+ ...+|.|++.|......++..|..+|..+.......
T Consensus 315 ~LL~~s~~~~v~E~Aa~AL~nL~ag~~~~~~~~~~~v~~~~glp~Lv~LL~s~~~~v~~~A~~aL~nLs~~~~~~~~I~~ 394 (584)
T 3l6x_A 315 SLLKESKTPAILEASAGAIQNLCAGRWTYGRYIRSALRQEKALSAIADLLTNEHERVVKAASGALRNLAVDARNKELIGK 394 (584)
T ss_dssp HHHHHCCCHHHHHHHHHHHHHHHSSCSHHHHHHHHHHTSHHHHHHHHHGGGCSCHHHHHHHHHHHHHHHTTCSCHHHHHH
T ss_pred HHHccCCCHHHHHHHHHHHHHHHcCCccccHHHHHHHHHcCcHHHHHHHHcCCCHHHHHHHHHHHHHHhCChhHHHHHHh
Confidence 77754 4788999999999999753322 222233 356999999999999999999999999998765533
Q ss_pred hhHHHHHHHHhcCCC------ChhHHHHHHHHHHHHhccCCCC-CCh--hhhHHHHHhhcCCC--ChHHHHHHHHHHHHH
Q 000156 971 KMVPYVTTALTDAKL------GAEGRKDLFDWLSKQLTGLSGF-PDA--AHLLKPASIAMTDK--SSDVRKAAEACIVEI 1039 (2015)
Q Consensus 971 ~ll~~l~~~L~~~k~------~p~~R~~~l~~L~~~l~~~~~~-~~~--~~ll~pl~~~L~D~--~~~VR~aA~~~L~~l 1039 (2015)
..+|.+...|.+... +.++...++..|...+...... ..+ ...+++|+.+|.+. ...++++|..+|..+
T Consensus 395 g~ip~LV~LL~~~~~~~~~~~s~~v~~~a~~tL~NL~a~~~~~~~~I~~~g~I~~Lv~LL~s~~~~~~v~k~Aa~vL~nl 474 (584)
T 3l6x_A 395 HAIPNLVKNLPGGQQNSSWNFSEDTVISILNTINEVIAENLEAAKKLRETQGIEKLVLINKSGNRSEKEVRAAALVLQTI 474 (584)
T ss_dssp HHHHHHHHTSSSSSCSGGGTCCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHHHHHTCSSSCHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHhcCCcccccccchHHHHHHHHHHHHHHhcCCHHHHHHHHHCCChHHHHHHHhCCCCChHHHHHHHHHHHHH
Confidence 355667777765421 2345666776666554322111 111 23566788888775 788888888777554
No 83
>4hat_C Exportin-1; heat repeat, nuclear export, RAN-ranbp1, LMB, leptomycin B, protein transport-antibiotic complex; HET: GNP LMB; 1.78A {Saccharomyces cerevisiae} PDB: 4hau_C* 4hav_C* 4hb2_C* 4hax_C* 4haw_C* 4hay_C* 4hb3_C* 4haz_C* 4hb4_C* 3m1i_C* 4hb0_C* 4gmx_C* 4gpt_C* 3vyc_A 2l1l_B
Probab=96.46 E-value=5.8 Score=55.21 Aligned_cols=173 Identities=10% Similarity=0.047 Sum_probs=116.8
Q ss_pred hHHHHHHhcccc--chHHHHHHHHHHHHHHHHHhChh-hHHhhhHHHHHHHHHhC-----CCcHHHHHHHHHHHHHHHHh
Q 000156 895 ELFGGLRGRLYD--SNKNLVMATLITLGAVASAMGPA-VEKSSKGVLSDILKCLG-----DNKKHMRECTLTVLDAWLAA 966 (2015)
Q Consensus 895 eL~~~L~~rL~D--sN~~V~~~Al~~l~~La~alg~~-f~~~~~~llp~ll~~L~-----D~k~~Vr~aa~~aL~~i~~~ 966 (2015)
-++..|...+.+ .++..+..++-++|.|+.++..+ ..+++..++|.++..+. |.+..||..+.-+++.+.+-
T Consensus 451 ~~~~~l~~~l~~~~~~W~~~EA~~~a~gaIa~~~~~~~e~~~l~~vi~~Ll~l~~~~~~~d~k~~v~~t~~~~lGry~~w 530 (1023)
T 4hat_C 451 IMISKLARQIDGSEWSWHNINTLSWAIGSISGTMSEDTEKRFVVTVIKDLLDLCVKKRGKDNKAVVASDIMYVVGQYPRF 530 (1023)
T ss_dssp HHHHHHHHHHSSTTCCHHHHHHHHHHHHHTTTSSCHHHHHHHHHHHHHHHHHHHHHCCSHHHHHHHHHHHHHHHHTCHHH
T ss_pred HHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHhhhccccCcchHHHHHHHHHHHHHHHHH
Confidence 344555555543 57999999999999999998876 67899999999999886 57778888887888754443
Q ss_pred cC-----chhhHHHHHHHHhcCCCChhHHHHHHHHHHHHhccCCC----------CCChhhhHHHHHhhcCCCChHHHHH
Q 000156 967 VH-----LDKMVPYVTTALTDAKLGAEGRKDLFDWLSKQLTGLSG----------FPDAAHLLKPASIAMTDKSSDVRKA 1031 (2015)
Q Consensus 967 ~g-----l~~ll~~l~~~L~~~k~~p~~R~~~l~~L~~~l~~~~~----------~~~~~~ll~pl~~~L~D~~~~VR~a 1031 (2015)
+. +..++..+...+.+. +|.+...++..+...-..... .+.+..++.-+..++.+-...-+..
T Consensus 531 l~~~~~~L~~vl~~L~~~l~~~--~~~v~~~A~~al~~l~~~c~~~l~~~~~~e~~p~~~~il~~l~~~~~~l~~~~~~~ 608 (1023)
T 4hat_C 531 LKAHWNFLRTVILKLFEFMHET--HEGVQDMACDTFIKIVQKCKYHFVIQQPRESEPFIQTIIRDIQKTTADLQPQQVHT 608 (1023)
T ss_dssp HHHCHHHHHHHHHHHHHHTTCS--CHHHHHHHHHHHHHHHHHHTHHHHSCCTTCSSCHHHHHHHTHHHHHTTSCHHHHHH
T ss_pred HhccHHHHHHHHHHHHHHhhcC--CHHHHHHHHHHHHHHHHHHHHHhhccCCCCCchhHHHHHHHHHHHHHhCCHHHHHH
Confidence 31 455666677777544 355555555444433222111 1233444444666777778888899
Q ss_pred HHHHHHHHHHHcChhH-HHHHhccCChHHHHHHHHHHhh
Q 000156 1032 AEACIVEILRAGGQET-IEKNLKDIQGPALALILERIKL 1069 (2015)
Q Consensus 1032 A~~~L~~l~~~~G~~~-~~~~l~~L~~~~~~~i~~~l~k 1069 (2015)
+.++++.++...|.+. ...++..|-+.-...++..++.
T Consensus 609 lyeai~~vi~~~~~~~~~~~~l~~L~~~~~~~~~~l~~~ 647 (1023)
T 4hat_C 609 FYKACGIIISEERSVAERNRLLSDLMQLPNMAWDTIVEQ 647 (1023)
T ss_dssp HHHHHHHHHTTCCSHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCHhhHHHHHHHHHHhHHHHHHHHHHH
Confidence 9999999999998654 5556666665555555555543
No 84
>3tjz_B Coatomer subunit gamma; protein trafficking, golgi membrane, protein transport-prote binding complex; HET: GNP; 2.90A {Bos taurus}
Probab=96.40 E-value=0.051 Score=66.12 Aligned_cols=282 Identities=10% Similarity=0.062 Sum_probs=131.1
Q ss_pred CCCchhHHHHHHHHHHhhhcch--hhhHHHHHHHHHHHhhhChh--HHHHHHHHHhhhCCChhHHHHHHHHHHHHHHHhC
Q 000156 675 TKFPKKCVVLCLLGISERVADI--KTRAHAMKCLTTFSEAVGPG--FIFERLYKIMKDHKNPKVLSEGILWMVSAVEDFG 750 (2015)
Q Consensus 675 ~~~~~~~~~~il~~LveKlgD~--K~r~~a~~~L~~l~e~~~~~--~Vl~~L~~~l~~~KnpKv~~~~l~~L~~li~~fG 750 (2015)
..|+...+..+.+.++.-+... ..|....-.+..++.. ..+ .+.+.+.+-+ +++||-+|.-++..|+.+...
T Consensus 59 ~~f~~~e~t~lf~~v~kl~~s~d~~lKrLvYLyl~~~~~~-~~e~iLv~Nsl~kDl-~~~N~~iR~lALRtL~~I~~~-- 134 (355)
T 3tjz_B 59 EHLGTTEATEAFFAMTKLFQSNDPTLRRMCYLTIKEMSCI-AEDVIIVTSSLTKDM-TGKEDSYRGPAVRALCQITDS-- 134 (355)
T ss_dssp CCCCHHHHHHHHHHHHGGGGCCCHHHHHHHHHHHHHHTTT-SSCGGGGHHHHHHHH-HSSCHHHHHHHHHHHHHHCCT--
T ss_pred CCCchhHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHhCCC-HHHHHHHHHHHHhhc-CCCcHhHHHHHHHHHhcCCCH--
Confidence 4667666667777777655543 4566666666666554 211 3566677765 799999999999999988631
Q ss_pred CCCCChhhHHHHHHhcCCCCCchhHHHHHHHHHHHHHHHhChhHHhhhhhccHHHHHHHHHHHhcCCCCCCCCCcccccC
Q 000156 751 VSHLKLKDLIDFCKDTGLQSSAAATRNATIKLLGALHKFVGPDIKGFLADVKPALLSALDAEYEKNPFEGTVVPKKTVRA 830 (2015)
Q Consensus 751 ~~~l~~k~li~~l~~~gL~~sn~~VR~aA~~ll~~Ly~~~G~~l~~~L~~lkp~ll~~Le~ef~k~~~~~~p~p~R~~r~ 830 (2015)
. =+..+...++.+ +.|.||.||.+|.-+...||....+-++.|++.
T Consensus 135 --~-m~~~l~~~lk~~-L~d~~pyVRk~A~l~~~kL~~~~pe~v~~~~~~------------------------------ 180 (355)
T 3tjz_B 135 --T-MLQAIERYMKQA-IVDKVPSVSSSALVSSLHLLKCSFDVVKRWVNE------------------------------ 180 (355)
T ss_dssp --T-THHHHHHHHHHH-HTCSSHHHHHHHHHHHHHHTTTCHHHHHTTHHH------------------------------
T ss_pred --H-HHHHHHHHHHHH-cCCCCHHHHHHHHHHHHHHhccCHHHHHHHHHH------------------------------
Confidence 1 146788889997 999999999999999877775443333333222
Q ss_pred ccccCCCCCCCCCCCCCcccccccchHHHHhcCCCChHHHHHHHHHHHHHHHhccccCCCCChhhHHHHHHhc-cccchH
Q 000156 831 SESTSSVSSGGSDGLPREDISGKFTPTLVKSLESPDWKVRLESIEAVNKILEEANKRIQPAGTGELFGGLRGR-LYDSNK 909 (2015)
Q Consensus 831 ~~~~~s~~~~~~d~lprvdIs~~L~~~ll~~l~d~~Wk~R~eale~L~~ll~~a~~~I~~~~~~eL~~~L~~r-L~DsN~ 909 (2015)
+.+.+.|.|.-+-..|+-.+.++... . ...+..++..|... +. +.
T Consensus 181 ---------------------------l~~ll~d~n~~V~~~Al~lL~ei~~~--d---~~a~~kLv~~l~~~~l~--~~ 226 (355)
T 3tjz_B 181 ---------------------------AQEAASSDNIMVQYHALGLLYHVRKN--D---RLAVSKMISKFTRHGLK--SP 226 (355)
T ss_dssp ---------------------------HHHHTTCSSHHHHHHHHHHHHHHHTT--C---HHHHHHHHHHHHSSCCS--CH
T ss_pred ---------------------------HHHHhcCCCccHHHHHHHHHHHHHhh--c---hHHHHHHHHHHhcCCCc--Ch
Confidence 22223334433334455555544321 0 00012233333221 11 12
Q ss_pred HHHHHHHHHHHHHHHHhChhhHHhhhHHHHHHHHHhCCCcHHHHHHHHHHHHHHHHhcC--chhhHHHHHHHHhcCCCCh
Q 000156 910 NLVMATLITLGAVASAMGPAVEKSSKGVLSDILKCLGDNKKHMRECTLTVLDAWLAAVH--LDKMVPYVTTALTDAKLGA 987 (2015)
Q Consensus 910 ~V~~~Al~~l~~La~alg~~f~~~~~~llp~ll~~L~D~k~~Vr~aa~~aL~~i~~~~g--l~~ll~~l~~~L~~~k~~p 987 (2015)
-....-++++..++. .+-......++..+...|+.....|.-.|..++-.+-.... +......+...|.++ .+
T Consensus 227 ~~q~~llr~l~~~~~---~d~~~~~~~~~~~l~~~L~~~~~aVvyEa~k~I~~l~~~~~~~~~~a~~~L~~fLss~--d~ 301 (355)
T 3tjz_B 227 FAYCMMIRVASRQLE---DEDGSRDSPLFDFIESCLRNKHEMVVYEAASAIVNLPGCSAKELAPAVSVLQLFCSSP--KA 301 (355)
T ss_dssp HHHHHHHHHHTCC--------------------CCCCCSSHHHHHHHHHHHTC-----------CCCTHHHHHHSS--SS
T ss_pred HHHHHHHHHHHHhcc---ccchhhHHHHHHHHHHHHcCCChHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHcCC--Cc
Confidence 222222333222221 11122345667777778888888888777788777654211 223344566667665 36
Q ss_pred hHHHHHHHHHHHHhccCCCCCChhhhHH-HHHhhcCCCChHHHHHHHHHH
Q 000156 988 EGRKDLFDWLSKQLTGLSGFPDAAHLLK-PASIAMTDKSSDVRKAAEACI 1036 (2015)
Q Consensus 988 ~~R~~~l~~L~~~l~~~~~~~~~~~ll~-pl~~~L~D~~~~VR~aA~~~L 1036 (2015)
.+|--++..|.......+ ....-+. -+..|+.|+|..++--|...|
T Consensus 302 niryvaLr~L~~l~~~~P---~~v~~~n~~ie~li~d~n~sI~t~Aittl 348 (355)
T 3tjz_B 302 ALRYAAVRTLNKVAMKHP---SAVTACNLDLENLVTDANRSIATLAITTL 348 (355)
T ss_dssp SSHHHHHHCC----------------------------------------
T ss_pred hHHHHHHHHHHHHHHHCc---HHHHHHHHHHHHHccCCcHhHHHHHHHHh
Confidence 789999988887665443 2233233 388899999998887765544
No 85
>3a6p_A Exportin-5; exportin-5, RANGTP, nuclearexport, importin-BE family, nucleus, phosphoprotein, protein transport; HET: GTP; 2.92A {Homo sapiens}
Probab=96.33 E-value=7.7 Score=55.17 Aligned_cols=185 Identities=12% Similarity=0.028 Sum_probs=104.2
Q ss_pred hHHHHHHHHHHHHHhcC--CCCCCCChHHHHHHHHHHhc-------ccCHHHHHHHHHHHHHHHHHhhhcchhhhHhHHH
Q 000156 299 WSERKDAVAELTKLAST--KRIAPGDFTEVCRTLKKLIT-------DVNIAVAVEAIQAIGNLARGLRTHFSGSSRFLLP 369 (2015)
Q Consensus 299 WkeR~eaL~~L~~l~~~--~ki~~~~y~~l~~~L~k~l~-------D~N~~V~~~A~~~l~~La~~L~~~f~~~~~~llp 369 (2015)
=..|.-|+..|+..+.. ..+...+...|-..|...+. +....|+...+.++..|++.- |-..+..+++
T Consensus 61 ~~vR~~A~~~Lk~~I~~~W~~l~~e~k~~Ir~~ll~~l~~~~~~~~~~~~~vr~kla~~la~Ia~~d---~p~~Wp~ll~ 137 (1204)
T 3a6p_A 61 AIVRHFGLQILEHVVKFRWNGMSRLEKVYLKNSVMELIANGTLNILEEENHIKDALSRIVVEMIKRE---WPQHWPDMLI 137 (1204)
T ss_dssp HHHHHHHHHHHHHHHHHSGGGSCHHHHHHHHHHHHHHHHHSSCCTTSSCHHHHHHHHHHHHHHHHHH---STTTCTTHHH
T ss_pred HHHHHHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHhhccccccccHHHHHHHHHHHHHHHHHh---CcccchHHHH
Confidence 34566666666665432 22333333333333434332 145778888889998888763 3345678888
Q ss_pred HHHHHhccCcHHHHHHHHHHHHHHHHh-cC-----------------CChHhHHHHHHHHhhc-----------------
Q 000156 370 VLLEKLKEKKPTVAESLTQTLQAMHKA-GC-----------------LNLVDVVEDVKTSVKN----------------- 414 (2015)
Q Consensus 370 ~LL~klkdkk~~V~~aa~~aL~al~~~-~~-----------------~~l~~il~~l~~~L~~----------------- 414 (2015)
.|+..+.. ....++.+..+|..+..- .. ..+..+++.+...+.+
T Consensus 138 ~L~~~~~~-~~~~~e~~L~iL~~L~Eev~~~~~~~~~r~~~l~~~l~~~~~~I~~~~~~iL~~~~~~~~~~~~~~~~~~~ 216 (1204)
T 3a6p_A 138 ELDTLSKQ-GETQTELVMFILLRLAEDVVTFQTLPPQRRRDIQQTLTQNMERIFSFLLNTLQENVNKYQQVKTDTSQESK 216 (1204)
T ss_dssp HHHHHHHT-CHHHHHHHHHHHHHHHHHHHTSCCSCHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHTTCSTTHHH
T ss_pred HHHHHhcC-CHHHHHHHHHHHHHHHHHHccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccchhh
Confidence 88887765 455677777777777542 00 0122344434334432
Q ss_pred --CChHHHHHHHHHHHHHHHhcChhHHHHhhhhHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhCc-hHHHHHHHhcc
Q 000156 415 --KVPLVRSLTLNWVTFCIETSSKAAVLKVHKDYVPICMECLNDGTPEVRDAAFSVLAAIAKSVGM-RPLERSIEKLD 489 (2015)
Q Consensus 415 --Knp~vR~~~l~~L~~~l~~~~~~~l~~~l~~l~p~l~k~L~Ds~~~VR~aA~~al~~l~~~~Ge-~~~~~~l~~Ld 489 (2015)
.++.++..+++.+..++.-.+...+...-..+++.+..++.| +++|.+|.+||..++..-.. ....+++.-+.
T Consensus 217 ~~~~~~l~~~aL~~l~~~l~Wi~~~~i~~~~~~ll~~l~~~l~~--~~lr~~A~ecL~~i~s~~~~~~~~~~li~~l~ 292 (1204)
T 3a6p_A 217 AQANCRVGVAALNTLAGYIDWVSMSHITAENCKLLEILCLLLNE--QELQLGAAECLLIAVSRKGKLEDRKPLMVLFG 292 (1204)
T ss_dssp HHHHHHHHHHHHHHHHTTTTTSCHHHHHTTTSHHHHHHHHGGGC--TTTHHHHHHHHHHHHTCCSCHHHHGGGGGGGS
T ss_pred hhhhHHHHHHHHHHHHHHHhccCHHHHHhccchHHHHHHHHcCC--HHHHHHHHHHHHHHHhCCCChhhHHHHHHHHh
Confidence 123455566666555444223222222112478888888774 78999999999999875432 22334555554
No 86
>1xm9_A Plakophilin 1; armadillo repeat, cell adhesion; 2.80A {Homo sapiens} SCOP: a.118.1.24
Probab=96.08 E-value=0.44 Score=60.40 Aligned_cols=387 Identities=11% Similarity=0.010 Sum_probs=202.9
Q ss_pred hHhhhcCCcHHHHHHHHHHHHHHHHHhchhhhhh--HHHHHHHHHHhhcCCChhHHHHHHHHHHHHHhh-h-hhh-----
Q 000156 57 FKKTVADSNAPVQDKALDALIAYLKAADADAGRY--AKEVCDAIAAKCLTGRPKTVEKAQAVFMLWVEL-E-AVD----- 127 (2015)
Q Consensus 57 ~~k~v~DsN~~vqe~~leal~~~l~~~~~~~~~~--~~~v~~~LieK~l~~k~~~k~~a~~~ll~~~E~-~-~~~----- 127 (2015)
+-+++...|..+|..|..+|..+...... .... -...+|.||+-.-...+.++..|..++..+.-. + .-.
T Consensus 7 lv~~L~s~~~~~q~~A~~~L~~l~~~~~~-~~~~i~~~g~i~~Lv~lL~s~~~~~~~~A~~aL~nLa~~~~~~k~~i~~~ 85 (457)
T 1xm9_A 7 AVQYLSSQDEKYQAIGAYYIQHTCFQDES-AKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLETRRQ 85 (457)
T ss_dssp HHHHHHSSCTHHHHHHHHHHHHHTSSCSS-HHHHHHHTTHHHHHHHHTTSSCHHHHHHHHHHHHHHHSSCHHHHHHHHHT
T ss_pred HHHHHCCCCHHHHHHHHHHHHHHHcCChH-HHHHHHHcCCHHHHHHHHcCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHc
Confidence 44566777889999999999887643221 1111 234688888763336788898888888877743 1 112
Q ss_pred hHHHHHHHHhh-cCChhhHHHHHHHHHHHHHHhCCCCcChhHHHhhhhhhh--------cC--------CChhHHHHHHH
Q 000156 128 VFLDVMEKAIK-NKVAKAVVPAIDVMFQALSEFGAKIIPPKRILKMLPELF--------DH--------QDQNVRASSKG 190 (2015)
Q Consensus 128 ~v~~~L~~~~~-~KnpKv~~~~l~~L~~~l~~fG~~~i~~k~il~~l~~ll--------~~--------~d~~VR~~a~~ 190 (2015)
..++.|...+. +.+++++..++.+|.++-..-..+..=++..++.|..++ ++ .+..|...|..
T Consensus 86 G~i~~Lv~lL~~~~~~~~~~~a~~aL~nLa~~~~~~~~i~~g~i~~Lv~ll~~~~s~~~~~~~~~~~e~~~~~v~~~a~~ 165 (457)
T 1xm9_A 86 NGIREAVSLLRRTGNAEIQKQLTGLLWNLSSTDELKEELIADALPVLADRVIIPFSGWCDGNSNMSREVVDPEVFFNATG 165 (457)
T ss_dssp TCHHHHHHHHTTCCCHHHHHHHHHHHHHHHTSSSTHHHHHHHHHHHHHHHTTHHHHTCC---------CCCHHHHHHHHH
T ss_pred CCHHHHHHHHhhCCCHHHHHHHHHHHHHHhcCHHhHHHHHhccHHHHHHHHhccccccccCccchhcccccHHHHHHHHH
Confidence 33567777787 789999999999998876531111100125678888888 22 24556557777
Q ss_pred HHHHHHHHhCCchhhHHHhh--hChHHHHHHHHHHHHhcCCCCCCCccchhhhhHhhh-hh--ccccCCCCCCCCCCCCC
Q 000156 191 LTLELCRWIGKDPVKTILFE--KMRDTMKKELEVELVNVSGTARPTRKIRAEQDKELG-QE--LISEDVGPGPSEESTAD 265 (2015)
Q Consensus 191 l~~ely~~lG~~~l~~~l~~--~Lk~~q~keLe~~f~k~~~~~~P~R~~rs~~~~~~~-~e--a~~~~~~~~~~~~~~~~ 265 (2015)
++..|... ++ .+..+.+ +.-+..+..|........ ...+.. ........ .. ...+. ..+
T Consensus 166 aL~nLs~~--~~-~~~~i~~~~g~i~~Lv~lL~~~~~~~~---~~~~~~-e~a~~~L~nLs~~~~~~~--~~~------- 229 (457)
T 1xm9_A 166 CLRNLSSA--DA-GRQTMRNYSGLIDSLMAYVQNCVAASR---CDDKSV-ENCMCVLHNLSYRLDAEV--PTR------- 229 (457)
T ss_dssp HHHHHTTS--HH-HHHHHTTSTTHHHHHHHHHHHHHHHTC---TTCTTH-HHHHHHHHHHTTTHHHHS--CCH-------
T ss_pred HHHHHccC--HH-HHHHHHHcCCCHHHHHHHHHhhccccC---CchHHH-HHHHHHHHhcccchhccC--cch-------
Confidence 77666643 22 2233321 333333444433221110 000000 00000000 00 00000 000
Q ss_pred CCCCCCCCCCCCcccccccCcchhhhhhhccCChHHHHHHHHHHHHHh---cCCCC-CCCChHHHHHHHHHHhc-ccCHH
Q 000156 266 VPPEIDEYELVDPVDILTPLEKSGFWEGVKATKWSERKDAVAELTKLA---STKRI-APGDFTEVCRTLKKLIT-DVNIA 340 (2015)
Q Consensus 266 ~~~~iD~~dl~~~vdIl~kl~~~~f~~~l~s~kWkeR~eaL~~L~~l~---~~~ki-~~~~y~~l~~~L~k~l~-D~N~~ 340 (2015)
...+.+ .......... .. ..| .....+. +..+.+ + .+. ..++- ..--...+++.|...+. ..+..
T Consensus 230 -~~~~~~-~~~~~~~~~~-~~-~~~-~~~~~~~---~~~~~~-~-~~~~~~~~~~~~~~l~~~~~l~~L~~lL~~~~~~~ 299 (457)
T 1xm9_A 230 -YRQLEY-NARNAYTEKS-ST-GCF-SNKSDKM---MNNNYD-C-PLPEEETNPKGSGWLYHSDAIRTYLNLMGKSKKDA 299 (457)
T ss_dssp -HHHHHH-TC------------------------------------CCCCCSSCCGGGGGGSHHHHHHHHHHHHHCCCHH
T ss_pred -hhhccc-cccccccccc-cc-chh-hccchhh---hhcccc-C-CccccccCchHHHHHhCcchHHHHHHHHhhcCCHH
Confidence 000000 0000000000 00 011 1110000 000100 0 000 00000 00001356677777777 55678
Q ss_pred HHHHHHHHHHHHHHHhhhc---c-hhhh--HhHHHHHHHHhccCcHHHHHHHHHHHHHHHHhcCCCh-----HhHHHHHH
Q 000156 341 VAVEAIQAIGNLARGLRTH---F-SGSS--RFLLPVLLEKLKEKKPTVAESLTQTLQAMHKAGCLNL-----VDVVEDVK 409 (2015)
Q Consensus 341 V~~~A~~~l~~La~~L~~~---f-~~~~--~~llp~LL~klkdkk~~V~~aa~~aL~al~~~~~~~l-----~~il~~l~ 409 (2015)
+...|+-+|..|+.+-... . +..+ ...+|.|++.+.+....|+..+..+|..+..+ ... ...++.++
T Consensus 300 ~~e~a~~aL~nl~~~~~~~~~~~~~~~v~~~~~l~~Lv~LL~~~~~~v~~~A~~aL~nls~~--~~~~~~i~~~~i~~Lv 377 (457)
T 1xm9_A 300 TLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRH--PLLHRVMGNQVFPEVT 377 (457)
T ss_dssp HHHHHHHHHHHHTTCSSSHHHHHHHHHHTTSCCHHHHHHHTTCSCHHHHHHHHHHHHHHHTS--GGGHHHHHHHTHHHHH
T ss_pred HHHHHHHHHHHhccCcCcchHHHHHHHHHHcCCchHHHHHHhCCCHhHHHHHHHHHHHHhcC--HHHHHHHHHhhhHHHH
Confidence 8888899999998653321 1 1112 35789999999999999999999999998764 122 23466777
Q ss_pred HHhhcCCh------HHHHHHHHHHHHHHHhcChhHHHHhh-hhHHHHHHHHhcCC-CHHHHHHHHHHHHHHH
Q 000156 410 TSVKNKVP------LVRSLTLNWVTFCIETSSKAAVLKVH-KDYVPICMECLNDG-TPEVRDAAFSVLAAIA 473 (2015)
Q Consensus 410 ~~L~~Knp------~vR~~~l~~L~~~l~~~~~~~l~~~l-~~l~p~l~k~L~Ds-~~~VR~aA~~al~~l~ 473 (2015)
.-|.+.++ .+...++..|..++...+.. ..... ...++.|..++... +.+|+..|...|..++
T Consensus 378 ~lL~~~~~~~~~~~~v~~~~l~~l~ni~~~~~~~-~~~i~~~g~l~~L~~L~~~~~~~~i~~~A~~~L~~~~ 448 (457)
T 1xm9_A 378 RLLTSHTGNTSNSEDILSSACYTVRNLMASQPQL-AKQYFSSSMLNNIINLCRSSASPKAAEAARLLLSDMW 448 (457)
T ss_dssp HTTTSCCSCSTTHHHHHHHHHHHHHHHHTTCTHH-HHHHCCHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTS
T ss_pred HhccCCCCCCCCcHHHHHHHHHHHHHHHhcCHHH-HHHHHHcCCHHHHHHHHcCCCcHHHHHHHHHHHHHHH
Confidence 77776543 56678888888877554332 11111 24678888999888 8999999888876543
No 87
>3tjz_B Coatomer subunit gamma; protein trafficking, golgi membrane, protein transport-prote binding complex; HET: GNP; 2.90A {Bos taurus}
Probab=95.95 E-value=0.088 Score=64.03 Aligned_cols=187 Identities=14% Similarity=0.144 Sum_probs=129.6
Q ss_pred CCCCCCCCcccccccCcchhhhhhhcc--CChHHHHHHHHHHHHHh-cCCCCCCCChHHHHHHHHHHhcccCHHHHHHHH
Q 000156 270 IDEYELVDPVDILTPLEKSGFWEGVKA--TKWSERKDAVAELTKLA-STKRIAPGDFTEVCRTLKKLITDVNIAVAVEAI 346 (2015)
Q Consensus 270 iD~~dl~~~vdIl~kl~~~~f~~~l~s--~kWkeR~eaL~~L~~l~-~~~ki~~~~y~~l~~~L~k~l~D~N~~V~~~A~ 346 (2015)
..||.-.|...|+... .. +.+ .+-+.+++++..+..+. .+..+....-..++..+.+++...|..+....-
T Consensus 16 ~~p~~~~~k~~v~qe~--r~----fn~~~~~~~kc~~~l~kll~l~~~G~~f~~~e~t~lf~~v~kl~~s~d~~lKrLvY 89 (355)
T 3tjz_B 16 SNPFQHLEKSAVLQEA--RV----FNETPINPRKCAHILTKILYLINQGEHLGTTEATEAFFAMTKLFQSNDPTLRRMCY 89 (355)
T ss_dssp ----CCCCHHHHHHHG--GG----TTSSSCCHHHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHGGGGCCCHHHHHHHH
T ss_pred cCccccchHHHHHHHH--HH----hcCCCCcHHHHHHHHHHHHHHHHCCCCCchhHHHHHHHHHHHHhcCCCHHHHHHHH
Confidence 3456555554454332 12 233 24445567888876655 453332223456777788889988888877776
Q ss_pred HHHHHHHHHhhhcchhhhHhHHHHHHHHhccCcHHHHHHHHHHHHHHHHhcCCChHhHHHHHHHHhhcCChHHHHHHHHH
Q 000156 347 QAIGNLARGLRTHFSGSSRFLLPVLLEKLKEKKPTVAESLTQTLQAMHKAGCLNLVDVVEDVKTSVKNKVPLVRSLTLNW 426 (2015)
Q Consensus 347 ~~l~~La~~L~~~f~~~~~~llp~LL~klkdkk~~V~~aa~~aL~al~~~~~~~l~~il~~l~~~L~~Knp~vR~~~l~~ 426 (2015)
-.+..+++. ...+-.++..+.+=+.++++.+|-.|..+|..+... .-++.+.+.+..++.|++|-||..++-.
T Consensus 90 Lyl~~~~~~-----~~e~iLv~Nsl~kDl~~~N~~iR~lALRtL~~I~~~--~m~~~l~~~lk~~L~d~~pyVRk~A~l~ 162 (355)
T 3tjz_B 90 LTIKEMSCI-----AEDVIIVTSSLTKDMTGKEDSYRGPAVRALCQITDS--TMLQAIERYMKQAIVDKVPSVSSSALVS 162 (355)
T ss_dssp HHHHHHTTT-----SSCGGGGHHHHHHHHHSSCHHHHHHHHHHHHHHCCT--TTHHHHHHHHHHHHTCSSHHHHHHHHHH
T ss_pred HHHHHhCCC-----HHHHHHHHHHHHhhcCCCcHhHHHHHHHHHhcCCCH--HHHHHHHHHHHHHcCCCCHHHHHHHHHH
Confidence 666666654 344668899999999999999998887777776542 4467788888999999999999999988
Q ss_pred HHHHHHhcChhHHHHhhhhHHHHHHHHhcCCCHHHHHHHHHHHHHHHH
Q 000156 427 VTFCIETSSKAAVLKVHKDYVPICMECLNDGTPEVRDAAFSVLAAIAK 474 (2015)
Q Consensus 427 L~~~l~~~~~~~l~~~l~~l~p~l~k~L~Ds~~~VR~aA~~al~~l~~ 474 (2015)
..+++...+ . .++.++..+..++.|+++.|-..|..++..+.+
T Consensus 163 ~~kL~~~~p-e----~v~~~~~~l~~ll~d~n~~V~~~Al~lL~ei~~ 205 (355)
T 3tjz_B 163 SLHLLKCSF-D----VVKRWVNEAQEAASSDNIMVQYHALGLLYHVRK 205 (355)
T ss_dssp HHHHTTTCH-H----HHHTTHHHHHHHTTCSSHHHHHHHHHHHHHHHT
T ss_pred HHHHhccCH-H----HHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHh
Confidence 887765432 2 236688899999999999998777776666653
No 88
>3oc3_A Helicase MOT1, MOT1; regulation of transcription, hydrolase-transc complex; HET: MES; 3.10A {Encephalitozoon cuniculi}
Probab=95.88 E-value=0.08 Score=65.74 Aligned_cols=236 Identities=14% Similarity=0.149 Sum_probs=124.3
Q ss_pred HHHHHHHHhhhCCChhHHHHHHHHHHHHHHHhCCC-----CCCh----hhHHHHHHhcCCCC-----CchhHHHHHHHHH
Q 000156 718 IFERLYKIMKDHKNPKVLSEGILWMVSAVEDFGVS-----HLKL----KDLIDFCKDTGLQS-----SAAATRNATIKLL 783 (2015)
Q Consensus 718 Vl~~L~~~l~~~KnpKv~~~~l~~L~~li~~fG~~-----~l~~----k~li~~l~~~gL~~-----sn~~VR~aA~~ll 783 (2015)
+++.|+.-++ +..|.+|-++...|.+++...|.. ..+- +-+.=+..+- ++| .-+-||+.|.++|
T Consensus 175 fcE~L~~DLF-dp~WEiRHGAALGLREILR~hG~GAGR~~~~N~DLAvRLLCVLALDR-FGDYVSDqVVAPVRETaAQtL 252 (800)
T 3oc3_A 175 FFEQISDNLL-SYEWYKRHGAFLAFAAMFSEIDNGGDIQIRVDSKLFSKIYEILVTDK-FNDFVDDRTVAPVRDAAAYLL 252 (800)
T ss_dssp TTHHHHHHTT-CSSHHHHHHHHHHHHHHHHHCC----CCCCCCTTHHHHHHHHHHHBC-CBBCSSSSCBCHHHHHHHHHH
T ss_pred HHHHHHHHhc-CcchhhhhHHHHHHHHHHHHhccCCceeccccHHHHHHHHHHHHhcc-ccccccCeeeeehHHHHHHHH
Confidence 4455555543 789999999999999999988742 1111 1111111111 222 1245777777777
Q ss_pred HHHHHHhChhHHhhhhhccHHHHHHHHHHHhcCCCCCCCCCcccccCccccCCCCCCCCCCCCCcccccccchHHHHhcC
Q 000156 784 GALHKFVGPDIKGFLADVKPALLSALDAEYEKNPFEGTVVPKKTVRASESTSSVSSGGSDGLPREDISGKFTPTLVKSLE 863 (2015)
Q Consensus 784 ~~Ly~~~G~~l~~~L~~lkp~ll~~Le~ef~k~~~~~~p~p~R~~r~~~~~~s~~~~~~d~lprvdIs~~L~~~ll~~l~ 863 (2015)
+.+ .++.+.+ + +...++..+.
T Consensus 253 GaL-~hLp~e~------------------------------------------------------~----IL~qLV~~l~ 273 (800)
T 3oc3_A 253 SRI-YPLIGPN------------------------------------------------------D----IIEQLVGFLD 273 (800)
T ss_dssp HHH-TTTSCSC------------------------------------------------------C----HHHHHTTGGG
T ss_pred HHH-HhCChhH------------------------------------------------------H----HHHHHHhhcC
Confidence 776 5554320 0 1112223445
Q ss_pred CCChHHHHHHHHHHHHHHHhccccCCCCChhhHHHHHHhccccchHHHHHHHHHHHHHHHHHhChhhHHhhhHHHHHHHH
Q 000156 864 SPDWKVRLESIEAVNKILEEANKRIQPAGTGELFGGLRGRLYDSNKNLVMATLITLGAVASAMGPAVEKSSKGVLSDILK 943 (2015)
Q Consensus 864 d~~Wk~R~eale~L~~ll~~a~~~I~~~~~~eL~~~L~~rL~DsN~~V~~~Al~~l~~La~alg~~f~~~~~~llp~ll~ 943 (2015)
...|.+|-.||-.|.=+ . ..+. . +..+++++...|.|.+-.|+..|..++.-++ .+ ..+..++..+-.
T Consensus 274 ~~~WEVRHGGLLGLKYL-~---DLL~-~-Ld~Vv~aVL~GL~D~DDDVRAVAAetLiPIA---~p---~~l~~LL~iLWd 341 (800)
T 3oc3_A 274 SGDWQVQFSGLIALGYL-K---EFVE-D-KDGLCRKLVSLLSSPDEDIKLLSAELLCHFP---IT---DSLDLVLEKCWK 341 (800)
T ss_dssp CSCHHHHHHHHHHHHHT-G---GGCC-C-HHHHHHHHHHHTTCSSHHHHHHHHHHHTTSC---CS---STHHHHHHHHHH
T ss_pred CCCeeehhhhHHHHHHH-H---HHHH-H-HHHHHHHHHhhcCCcccHHHHHHHHHhhhhc---ch---hhHHHHHHHHHH
Confidence 66799999988777744 1 1111 1 4566666666667776677766666666555 21 123333444433
Q ss_pred HhCCC--cHHHHHHHHHHHHHHHHhc----CchhhHHHHHHHHhcCCCChhHHHHHHHHHHHHhccCCCCCChhhhHHHH
Q 000156 944 CLGDN--KKHMRECTLTVLDAWLAAV----HLDKMVPYVTTALTDAKLGAEGRKDLFDWLSKQLTGLSGFPDAAHLLKPA 1017 (2015)
Q Consensus 944 ~L~D~--k~~Vr~aa~~aL~~i~~~~----gl~~ll~~l~~~L~~~k~~p~~R~~~l~~L~~~l~~~~~~~~~~~ll~pl 1017 (2015)
+|.+- -..-..+....|..++..- ....++|.+.+.|.+. -+.+|..++..+...+ ...++..+
T Consensus 342 ~L~~LDDLSASTgSVMdLLAkL~s~p~~a~~dp~LVPRL~PFLRHt--ITSVR~AVL~TL~tfL--------~~~~LRLI 411 (800)
T 3oc3_A 342 NIESEELISVSKTSNLSLLTKIYRENPELSIPPERLKDIFPCFTSP--VPEVRTSILNMVKNLS--------EESIDFLV 411 (800)
T ss_dssp HHHTCCSCCTTHHHHHHHHHHHHHHCTTCCCCSGGGGGTGGGGTCS--SHHHHHHHHHHTTTCC--------CHHHHHHH
T ss_pred HhhhhcccchhhHHHHHHHHHHHcCCcccccChHHHHHHHhhhcCC--cHHHHHHHHHHHHHHH--------hhhHHHHH
Confidence 33322 2223333344444444332 1234566666666654 2566666666654433 13344443
Q ss_pred Hh-hcCCCChHHHHHHHHHH
Q 000156 1018 SI-AMTDKSSDVRKAAEACI 1036 (2015)
Q Consensus 1018 ~~-~L~D~~~~VR~aA~~~L 1036 (2015)
++ .|-+++.+||+.+.++.
T Consensus 412 FQNILLE~neeIl~lS~~VW 431 (800)
T 3oc3_A 412 AEVVLIEEKDEIREMAIKLL 431 (800)
T ss_dssp HHHHHHCSCHHHHHHHHHHH
T ss_pred HHHHHhCCcHHHHHHHHHHH
Confidence 33 45666666666666544
No 89
>4gmo_A Putative uncharacterized protein; ARM, heat, solenoid, nuclear transport, chaperone, RPL5, RPL KAP104, nucleus; 2.10A {Chaetomium thermophilum var} PDB: 4gmn_A
Probab=95.87 E-value=1.9 Score=57.41 Aligned_cols=89 Identities=22% Similarity=0.218 Sum_probs=61.6
Q ss_pred hhhhcCCChhhhhcCCChHHHHHHHHHHHHHhhccCCCCc-hHHH---hhhhhhHhhhcCCcHHHHHHHHHHHHHHHHHh
Q 000156 8 LKEAKKLPWEDRLLHKNWKVRNEANIDLAALCDSITDPKD-NRIR---ELGPLFKKTVADSNAPVQDKALDALIAYLKAA 83 (2015)
Q Consensus 8 ~~~~~~lpl~erl~~k~WK~R~~ayeeL~~~~~~~~d~~~-~~~~---~~~~~~~k~v~DsN~~vqe~~leal~~~l~~~ 83 (2015)
+.+=.=+|+.++|+|.+.+.|..|...|...+.. +.. ..+. -...++.+.+.|+|..|++.|..+|..+....
T Consensus 31 ~~~~~i~Pll~~L~S~~~~~r~~A~~al~~l~~~---~~~~~l~~~~~~v~~ll~~lL~D~~~~Vr~~A~gaLrnL~~~~ 107 (684)
T 4gmo_A 31 LREDKILPVLKDLKSPDAKSRTTAAGAIANIVQD---AKCRKLLLREQVVHIVLTETLTDNNIDSRAAGWEILKVLAQEE 107 (684)
T ss_dssp HHHHTTHHHHHHHSSSCCSHHHHHHHHHHHHTTS---HHHHHHHHHTTHHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHS
T ss_pred cchhhHHHHHHHcCCCCHHHHHHHHHHHHHHHcC---cHHHHHHHHcCCHHHHHHHHcCCCCHHHHHHHHHHHHHHHhhc
Confidence 4445668999999999999999999999988742 111 1111 12345677899999999999999998887655
Q ss_pred chhhhhh--HHHHHHHHH
Q 000156 84 DADAGRY--AKEVCDAIA 99 (2015)
Q Consensus 84 ~~~~~~~--~~~v~~~Li 99 (2015)
+.++..+ ..+|++.|.
T Consensus 108 g~d~~~~l~~~~il~~L~ 125 (684)
T 4gmo_A 108 EADFCVHLYRLDVLTAIE 125 (684)
T ss_dssp CHHHHHHHHHTTHHHHHH
T ss_pred CchHHHHHHHcChHHHHH
Confidence 4433322 233555443
No 90
>4ady_A RPN2, 26S proteasome regulatory subunit RPN2; protein binding, PC repeat; 2.70A {Saccharomyces cerevisiae} PDB: 4b4t_N
Probab=95.78 E-value=0.59 Score=63.17 Aligned_cols=264 Identities=16% Similarity=0.120 Sum_probs=161.1
Q ss_pred ChhHHHHHHHHHHHHHHHhCCCCCChhhHHHHHHhcCCCCCchhHHHHHHHHHHHHHHHhChh--HHhhhhhccHHHHHH
Q 000156 731 NPKVLSEGILWMVSAVEDFGVSHLKLKDLIDFCKDTGLQSSAAATRNATIKLLGALHKFVGPD--IKGFLADVKPALLSA 808 (2015)
Q Consensus 731 npKv~~~~l~~L~~li~~fG~~~l~~k~li~~l~~~gL~~sn~~VR~aA~~ll~~Ly~~~G~~--l~~~L~~lkp~ll~~ 808 (2015)
++.+|.+++..|.-+.- |... ..+++.+... +.+.+..+|..|.-.+|-+|.-.|.. +.. ++..
T Consensus 450 ~~~ir~gAaLGLGla~~--GS~~---eev~e~L~~~-L~dd~~~~~~~AalALGli~vGTgn~~ai~~--------LL~~ 515 (963)
T 4ady_A 450 VDVLLHGASLGIGLAAM--GSAN---IEVYEALKEV-LYNDSATSGEAAALGMGLCMLGTGKPEAIHD--------MFTY 515 (963)
T ss_dssp HHHHHHHHHHHHHHHST--TCCC---HHHHHHHHHH-HHTCCHHHHHHHHHHHHHHHTTCCCHHHHHH--------HHHH
T ss_pred cHHHHHHHHHHHHHHhc--CCCC---HHHHHHHHHH-HhcCCHHHHHHHHHHHhhhhcccCCHHHHHH--------HHHH
Confidence 47788888877766543 4322 3566777776 77777888999999999888655532 121 1111
Q ss_pred HHHHHhcCCCCCCCCCcccccCccccCCCCCCCCCCCCCcccccccchHHHHhc-CCCChHHHHHHHHHHHHHHHhcccc
Q 000156 809 LDAEYEKNPFEGTVVPKKTVRASESTSSVSSGGSDGLPREDISGKFTPTLVKSL-ESPDWKVRLESIEAVNKILEEANKR 887 (2015)
Q Consensus 809 Le~ef~k~~~~~~p~p~R~~r~~~~~~s~~~~~~d~lprvdIs~~L~~~ll~~l-~d~~Wk~R~eale~L~~ll~~a~~~ 887 (2015)
+.+ .. .+ .-.|..... . | .=.+.+.+ ..+.+++.+ .+.+|-+|..++-.+.-..
T Consensus 516 ~~e---~~-~e---~vrR~aalg--L-----G-ll~~g~~e----~~~~li~~L~~~~dp~vRygaa~alglAy------ 570 (963)
T 4ady_A 516 SQE---TQ-HG---NITRGLAVG--L-----A-LINYGRQE----LADDLITKMLASDESLLRYGGAFTIALAY------ 570 (963)
T ss_dssp HHH---CS-CH---HHHHHHHHH--H-----H-HHTTTCGG----GGHHHHHHHHHCSCHHHHHHHHHHHHHHT------
T ss_pred Hhc---cC-cH---HHHHHHHHH--H-----H-hhhCCChH----HHHHHHHHHHhCCCHHHHHHHHHHHHHHh------
Confidence 111 00 00 000100000 0 0 00000001 123454444 4678999998876665221
Q ss_pred CCCCChhhHHHHH-HhccccchHHHHHHHHHHHHHHHHHhChhhHHhhhHHHHHHHHHh-CCCcHHHHHHHHHHHHHHHH
Q 000156 888 IQPAGTGELFGGL-RGRLYDSNKNLVMATLITLGAVASAMGPAVEKSSKGVLSDILKCL-GDNKKHMRECTLTVLDAWLA 965 (2015)
Q Consensus 888 I~~~~~~eL~~~L-~~rL~DsN~~V~~~Al~~l~~La~alg~~f~~~~~~llp~ll~~L-~D~k~~Vr~aa~~aL~~i~~ 965 (2015)
....+ ...++.| ....+|.+..|++.|+..|+.|+ +|.. ..++.++..| .+.++.||..+.-+|+.+..
T Consensus 571 aGTGn-~~aIq~LL~~~~~d~~d~VRraAViaLGlI~--~g~~------e~v~rlv~~L~~~~d~~VR~gAalALGli~a 641 (963)
T 4ady_A 571 AGTGN-NSAVKRLLHVAVSDSNDDVRRAAVIALGFVL--LRDY------TTVPRIVQLLSKSHNAHVRCGTAFALGIACA 641 (963)
T ss_dssp TTSCC-HHHHHHHHHHHHHCSCHHHHHHHHHHHHHHT--SSSC------SSHHHHTTTGGGCSCHHHHHHHHHHHHHHTS
T ss_pred cCCCC-HHHHHHHHHHhccCCcHHHHHHHHHHHHhhc--cCCH------HHHHHHHHHHHhcCCHHHHHHHHHHHHHhcc
Confidence 22222 3445533 33457888899999888888764 3332 2355666544 46789999999999998887
Q ss_pred hcCchhhHHHHHHHHhcCCCChhHHHHHHHHHHHHhccCCC--CCChhhhHHHHHhhcCC--CChHHHHHHHHHHHHHHH
Q 000156 966 AVHLDKMVPYVTTALTDAKLGAEGRKDLFDWLSKQLTGLSG--FPDAAHLLKPASIAMTD--KSSDVRKAAEACIVEILR 1041 (2015)
Q Consensus 966 ~~gl~~ll~~l~~~L~~~k~~p~~R~~~l~~L~~~l~~~~~--~~~~~~ll~pl~~~L~D--~~~~VR~aA~~~L~~l~~ 1041 (2015)
..+...+++.|...+.|. +..+|+.++.-|......... .+.+..++.-+.+.+.| .++.+|-.++-+.+-+.
T Consensus 642 Gn~~~~aid~L~~L~~D~--d~~Vrq~Ai~ALG~Ig~gtnna~~~rva~~l~~L~~~~~dk~~d~~~~fga~iAqGll~- 718 (963)
T 4ady_A 642 GKGLQSAIDVLDPLTKDP--VDFVRQAAMIALSMILIQQTEKLNPQVADINKNFLSVITNKHQEGLAKFGACVAQGIMN- 718 (963)
T ss_dssp SSCCHHHHHHHHHHHTCS--SHHHHHHHHHHHHHHSTTCCTTTCTTHHHHHHHHHHHHHCSSSCHHHHHHHHHHHHHHT-
T ss_pred CCCcHHHHHHHHHHccCC--CHHHHHHHHHHHHHHhcCCccccchHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHh-
Confidence 777788888877777766 589999999999876655443 23567777777787876 45778888887777554
Q ss_pred HcChh
Q 000156 1042 AGGQE 1046 (2015)
Q Consensus 1042 ~~G~~ 1046 (2015)
.|..
T Consensus 719 -aG~~ 722 (963)
T 4ady_A 719 -AGGR 722 (963)
T ss_dssp -TGGG
T ss_pred -cCCC
Confidence 4443
No 91
>3opb_A SWI5-dependent HO expression protein 4; heat and arm fold, myosin folding and function, myosin bindi protein, protein binding; 2.90A {Saccharomyces cerevisiae}
Probab=95.68 E-value=4.2 Score=53.90 Aligned_cols=287 Identities=11% Similarity=0.078 Sum_probs=156.5
Q ss_pred CChhHHHHHHHHHHHHHHHhCCCCCChhhHHHHHHhcCCCCCchhHHHHHHHHHHHHHHHhChhHHhhhhhccHHHHHHH
Q 000156 730 KNPKVLSEGILWMVSAVEDFGVSHLKLKDLIDFCKDTGLQSSAAATRNATIKLLGALHKFVGPDIKGFLADVKPALLSAL 809 (2015)
Q Consensus 730 KnpKv~~~~l~~L~~li~~fG~~~l~~k~li~~l~~~gL~~sn~~VR~aA~~ll~~Ly~~~G~~l~~~L~~lkp~ll~~L 809 (2015)
++..++.-++-.|+++-..-+.....+..+.+.+.+. |.+.+...|.-|++.|.++ ...+.++..|.+-. ..++.|
T Consensus 306 ~~~~ir~lAavvL~KL~~~~~~~~~si~~La~~~~~~-L~~~~~~~~~~AvEgLaYL--Sl~~~VKe~L~~d~-~~L~~L 381 (778)
T 3opb_A 306 NVEDVQIYSALVLVKTWSFTKLTCINLKQLSEIFINA-ISRRIVPKVEMSVEALAYL--SLKASVKIMIRSNE-SFTEIL 381 (778)
T ss_dssp TSGGGHHHHHHHHHHHTGGGTCTTCCHHHHHHHHHHH-TTTCCHHHHHHHHHHHHHH--TTSSHHHHHHHHCH-HHHHHH
T ss_pred ccHHHHHHHHHHHHHHhcCCCCCcCcHHHHHHHHHHH-HhcCCccHHHHHHHHHHHH--hCCHHHHHHHHhCH-HHHHHH
Confidence 4567888788788777654444456677899999887 8887767799999988755 56778887774322 223333
Q ss_pred HHHHhcCCCCCCCCCcccccCccccCCCCCCCCCCCC-CcccccccchHHHH------hcCCCChHHHHHHHHH-HHHHH
Q 000156 810 DAEYEKNPFEGTVVPKKTVRASESTSSVSSGGSDGLP-REDISGKFTPTLVK------SLESPDWKVRLESIEA-VNKIL 881 (2015)
Q Consensus 810 e~ef~k~~~~~~p~p~R~~r~~~~~~s~~~~~~d~lp-rvdIs~~L~~~ll~------~l~d~~Wk~R~eale~-L~~ll 881 (2015)
-+-+.. ....+ . .-++.+ -...-........+ ...+ .+|- .+.+ .-.|..+ ...+.+.. -...
T Consensus 382 v~llk~-~~d~s-~-~Ygal~--IL~NLt~~~~~~~~e~~~l-~~Lk-~~A~~~~p~~~~~d~~~-~~~~~v~~~~~~~- 452 (778)
T 3opb_A 382 LTMIKS-QKMTH-C-LYGLLV--IMANLSTLPEEXXXXXXXX-XXXX-XXXXXXXPAADKVGAEK-AAKEDILLFNEKY- 452 (778)
T ss_dssp HHHHTT-TCCTT-H-HHHHHH--HHHHTTCCCCCCCCCCC--------------------CCTHH-HHHHHHHHHHHHH-
T ss_pred HHHHhC-CCCch-H-HHHHHH--HHHHhcCCCcccchhhhhh-hhhh-hhccccCcccCcccccc-cchHHHHHHHHHH-
Confidence 332221 10000 0 000000 00000000000000 0000 0000 0000 0011111 11222211 1111
Q ss_pred HhccccCCCCChhhHHHHHHhccccchHHHHHHHHHHHHHHHHHhChhhHH-hh-hHHHHHHHHHhCCCcHH---HHHHH
Q 000156 882 EEANKRIQPAGTGELFGGLRGRLYDSNKNLVMATLITLGAVASAMGPAVEK-SS-KGVLSDILKCLGDNKKH---MRECT 956 (2015)
Q Consensus 882 ~~a~~~I~~~~~~eL~~~L~~rL~DsN~~V~~~Al~~l~~La~alg~~f~~-~~-~~llp~ll~~L~D~k~~---Vr~aa 956 (2015)
+.. ..+++.|...++..+..++..|+.+|..|+.. +..+. .+ ...++.++..|.+.... +|..|
T Consensus 453 ------l~e---aGvIp~Lv~Ll~S~s~~~re~A~~aL~nLS~d--~~~R~~lvqqGal~~LL~lL~s~~~~~~~~k~~A 521 (778)
T 3opb_A 453 ------ILR---TELISFLKREMHNLSPNCKQQVVRIIYNITRS--KNFIPQLAQQGAVKIILEYLANKQDIGEPIRILG 521 (778)
T ss_dssp ------TTT---TTHHHHHHHHGGGSCHHHHHHHHHHHHHHHTS--GGGHHHHHHTTHHHHHHHHTTCC---CCHHHHHH
T ss_pred ------HHH---CcCHHHHHHHHcCCCHHHHHHHHHHHHHHcCC--HHHHHHHHHCCCHHHHHHHHhcCCCcchHHHHHH
Confidence 221 34788888888888899999999999999744 33332 22 35789999999887654 89899
Q ss_pred HHHHHHHHHhcCc---------hhhHHHHHHHHhc-CCCC----------h-hHHHHHHHHHHHHhccCCCC--CC----
Q 000156 957 LTVLDAWLAAVHL---------DKMVPYVTTALTD-AKLG----------A-EGRKDLFDWLSKQLTGLSGF--PD---- 1009 (2015)
Q Consensus 957 ~~aL~~i~~~~gl---------~~ll~~l~~~L~~-~k~~----------p-~~R~~~l~~L~~~l~~~~~~--~~---- 1009 (2015)
..+|..+...... -..++.+...|.. +... + ..+.+++.-|... ...+.. .+
T Consensus 522 A~ALArLlis~np~~~f~~~~~~~aI~pLv~LL~~~~~~~~~~l~~~~~~~~l~~feAL~ALTNL-As~~~n~~E~~r~~ 600 (778)
T 3opb_A 522 CRALTRMLIFTNPGLIFKKYSALNAIPFLFELLPRSTPVDDNPLHNDEQIKLTDNYEALLALTNL-ASSETSDGEEVCKH 600 (778)
T ss_dssp HHHHHHHHHTSCHHHHSSSSCSTTHHHHHHHTSCCSSSCSSCC---CCCCCHHHHHHHHHHHHHH-HHCCSHHHHHHHHH
T ss_pred HHHHHHHHhcCCHHHHcCCCccccchHHHHHHcCCCCCcccccccccccccHHHHHHHHHHHHHH-hcCCcccchHHHHH
Confidence 9999988865431 1455677777762 2100 0 2266777776643 333311 11
Q ss_pred h-h--hhHHHHHhhcCCCChHHHHHHHHHHHHHHH
Q 000156 1010 A-A--HLLKPASIAMTDKSSDVRKAAEACIVEILR 1041 (2015)
Q Consensus 1010 ~-~--~ll~pl~~~L~D~~~~VR~aA~~~L~~l~~ 1041 (2015)
+ . ..++.|...|.+.+..||.+|.+++..++.
T Consensus 601 Ii~~~ga~~~L~~LL~s~n~~VrrAA~elI~NL~~ 635 (778)
T 3opb_A 601 IVSTKVYWSTIENLMLDENVPLQRSTLELISNMMS 635 (778)
T ss_dssp HHHSHHHHHHHHHGGGCSSHHHHHHHHHHHHHHHT
T ss_pred HHHhcCHHHHHHHHHhCCCHHHHHHHHHHHHHHhC
Confidence 1 2 134457788888899999999999999886
No 92
>1xm9_A Plakophilin 1; armadillo repeat, cell adhesion; 2.80A {Homo sapiens} SCOP: a.118.1.24
Probab=95.52 E-value=0.2 Score=63.50 Aligned_cols=262 Identities=11% Similarity=0.061 Sum_probs=153.3
Q ss_pred HHHHHHHhhhCCChhHHHHHHHHHHHHHHHhCCCCC--C--hhhHHHHHHhcCCCCCchhHHHHHHHHHHHHHHHhChhH
Q 000156 719 FERLYKIMKDHKNPKVLSEGILWMVSAVEDFGVSHL--K--LKDLIDFCKDTGLQSSAAATRNATIKLLGALHKFVGPDI 794 (2015)
Q Consensus 719 l~~L~~~l~~~KnpKv~~~~l~~L~~li~~fG~~~l--~--~k~li~~l~~~gL~~sn~~VR~aA~~ll~~Ly~~~G~~l 794 (2015)
++.++..+ .+.++.++..++..|..+.. +.... . -...++.+..+ |.+.++.++..|..+|..|... .+..
T Consensus 4 l~~lv~~L-~s~~~~~q~~A~~~L~~l~~--~~~~~~~~i~~~g~i~~Lv~l-L~s~~~~~~~~A~~aL~nLa~~-~~~~ 78 (457)
T 1xm9_A 4 IPKAVQYL-SSQDEKYQAIGAYYIQHTCF--QDESAKQQVYQLGGICKLVDL-LRSPNQNVQQAAAGALRNLVFR-STTN 78 (457)
T ss_dssp HHHHHHHH-HSSCTHHHHHHHHHHHHHTS--SCSSHHHHHHHTTHHHHHHHH-TTSSCHHHHHHHHHHHHHHHSS-CHHH
T ss_pred HHHHHHHH-CCCCHHHHHHHHHHHHHHHc--CChHHHHHHHHcCCHHHHHHH-HcCCCHHHHHHHHHHHHHHhcC-CHHH
Confidence 34555554 56678888888888887652 21111 0 12356677777 8999999999999998887642 1222
Q ss_pred HhhhhhccHHHHHHHHHHHhcCCCCCCCCCcccccCccccCCCCCCCCCCCCCcccccccchHHHHhcC-CCChHHHHHH
Q 000156 795 KGFLADVKPALLSALDAEYEKNPFEGTVVPKKTVRASESTSSVSSGGSDGLPREDISGKFTPTLVKSLE-SPDWKVRLES 873 (2015)
Q Consensus 795 ~~~L~~lkp~ll~~Le~ef~k~~~~~~p~p~R~~r~~~~~~s~~~~~~d~lprvdIs~~L~~~ll~~l~-d~~Wk~R~ea 873 (2015)
+..+ -+ . + ..+.|++.+. +.+...|..|
T Consensus 79 k~~i-----------~~----~---G---------------------------------~i~~Lv~lL~~~~~~~~~~~a 107 (457)
T 1xm9_A 79 KLET-----------RR----Q---N---------------------------------GIREAVSLLRRTGNAEIQKQL 107 (457)
T ss_dssp HHHH-----------HH----T---T---------------------------------CHHHHHHHHTTCCCHHHHHHH
T ss_pred HHHH-----------HH----c---C---------------------------------CHHHHHHHHhhCCCHHHHHHH
Confidence 2111 00 0 0 1245667777 6678888899
Q ss_pred HHHHHHHHHhccccCCCCChhhHHHHHHhccc--------c--------chHHHHHHHHHHHHHHHHHhChhhHHhhh--
Q 000156 874 IEAVNKILEEANKRIQPAGTGELFGGLRGRLY--------D--------SNKNLVMATLITLGAVASAMGPAVEKSSK-- 935 (2015)
Q Consensus 874 le~L~~ll~~a~~~I~~~~~~eL~~~L~~rL~--------D--------sN~~V~~~Al~~l~~La~alg~~f~~~~~-- 935 (2015)
+..|..+... ...........++.|...|. + ....+...|+.++..|+.. +...+.+.
T Consensus 108 ~~aL~nLa~~--~~~~~~i~~g~i~~Lv~ll~~~~s~~~~~~~~~~~e~~~~~v~~~a~~aL~nLs~~--~~~~~~i~~~ 183 (457)
T 1xm9_A 108 TGLLWNLSST--DELKEELIADALPVLADRVIIPFSGWCDGNSNMSREVVDPEVFFNATGCLRNLSSA--DAGRQTMRNY 183 (457)
T ss_dssp HHHHHHHHTS--SSTHHHHHHHHHHHHHHHTTHHHHTCC---------CCCHHHHHHHHHHHHHHTTS--HHHHHHHTTS
T ss_pred HHHHHHHhcC--HHhHHHHHhccHHHHHHHHhccccccccCccchhcccccHHHHHHHHHHHHHHccC--HHHHHHHHHc
Confidence 8888888742 11111111245666777772 2 2355677899999999864 44444333
Q ss_pred -HHHHHHHHHhCC------CcHHHHHHHHHHHHHHHHh----------------------------c-------------
Q 000156 936 -GVLSDILKCLGD------NKKHMRECTLTVLDAWLAA----------------------------V------------- 967 (2015)
Q Consensus 936 -~llp~ll~~L~D------~k~~Vr~aa~~aL~~i~~~----------------------------~------------- 967 (2015)
..+|.++..|.+ ....+.+.+..+|..+... +
T Consensus 184 ~g~i~~Lv~lL~~~~~~~~~~~~~~e~a~~~L~nLs~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (457)
T 1xm9_A 184 SGLIDSLMAYVQNCVAASRCDDKSVENCMCVLHNLSYRLDAEVPTRYRQLEYNARNAYTEKSSTGCFSNKSDKMMNNNYD 263 (457)
T ss_dssp TTHHHHHHHHHHHHHHHTCTTCTTHHHHHHHHHHHTTTHHHHSCCHHHHHHHTC--------------------------
T ss_pred CCCHHHHHHHHHhhccccCCchHHHHHHHHHHHhcccchhccCcchhhhcccccccccccccccchhhccchhhhhcccc
Confidence 678888887763 2222444444444433200 0
Q ss_pred -----------Cc-----hhhHHHHHHHHhcCCCChhHHHHHHHHHHHHhccCCCC-CCh-------hhhHHHHHhhcCC
Q 000156 968 -----------HL-----DKMVPYVTTALTDAKLGAEGRKDLFDWLSKQLTGLSGF-PDA-------AHLLKPASIAMTD 1023 (2015)
Q Consensus 968 -----------gl-----~~ll~~l~~~L~~~k~~p~~R~~~l~~L~~~l~~~~~~-~~~-------~~ll~pl~~~L~D 1023 (2015)
|. ..+++.+...|.+.+ ++.++..++..|...-...... ... ...+++|+..|.+
T Consensus 264 ~~~~~~~~~~~~~~~l~~~~~l~~L~~lL~~~~-~~~~~e~a~~aL~nl~~~~~~~~~~~~~~~v~~~~~l~~Lv~LL~~ 342 (457)
T 1xm9_A 264 CPLPEEETNPKGSGWLYHSDAIRTYLNLMGKSK-KDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQS 342 (457)
T ss_dssp --CCCCCSSCCGGGGGGSHHHHHHHHHHHHHCC-CHHHHHHHHHHHHHHTTCSSSHHHHHHHHHHTTSCCHHHHHHHTTC
T ss_pred CCccccccCchHHHHHhCcchHHHHHHHHhhcC-CHHHHHHHHHHHHHhccCcCcchHHHHHHHHHHcCCchHHHHHHhC
Confidence 11 123556667776543 4666665555554322211110 011 2345679999999
Q ss_pred CChHHHHHHHHHHHHHHH
Q 000156 1024 KSSDVRKAAEACIVEILR 1041 (2015)
Q Consensus 1024 ~~~~VR~aA~~~L~~l~~ 1041 (2015)
.+.+||+.|..+|..+..
T Consensus 343 ~~~~v~~~A~~aL~nls~ 360 (457)
T 1xm9_A 343 GNSDVVRSGASLLSNMSR 360 (457)
T ss_dssp SCHHHHHHHHHHHHHHHT
T ss_pred CCHhHHHHHHHHHHHHhc
Confidence 999999999999988754
No 93
>1te4_A Conserved protein MTH187; methanobacterium thermoautotrophicum, structural proteomics, heat-like repeat; NMR {Methanothermobacterthermautotrophicus} SCOP: a.118.1.16
Probab=95.49 E-value=0.011 Score=61.30 Aligned_cols=85 Identities=16% Similarity=0.213 Sum_probs=61.4
Q ss_pred hHHHHhcCCCChHHHHHHHHHHHHHHHhccccCCCCChhhHHHHHHhccccchHHHHHHHHHHHHHHHHHhChhhHHhhh
Q 000156 856 PTLVKSLESPDWKVRLESIEAVNKILEEANKRIQPAGTGELFGGLRGRLYDSNKNLVMATLITLGAVASAMGPAVEKSSK 935 (2015)
Q Consensus 856 ~~ll~~l~d~~Wk~R~eale~L~~ll~~a~~~I~~~~~~eL~~~L~~rL~DsN~~V~~~Al~~l~~La~alg~~f~~~~~ 935 (2015)
+.|+..+.|.+|.+|..|+..|..+- ..+.+..|...|.|.+..|+..|+..++.+. -.
T Consensus 45 ~~L~~~L~d~~~~vR~~A~~aL~~~~-----------~~~a~~~L~~~L~d~~~~VR~~A~~aL~~~~----------~~ 103 (131)
T 1te4_A 45 EPLLESLSNEDWRIRGAAAWIIGNFQ-----------DERAVEPLIKLLEDDSGFVRSGAARSLEQIG----------GE 103 (131)
T ss_dssp HHHHHGGGCSCHHHHHHHHHHHGGGC-----------SHHHHHHHHHHHHHCCTHHHHHHHHHHHHHC----------SH
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHhcC-----------CHHHHHHHHHHHcCCCHHHHHHHHHHHHHhC----------cH
Confidence 56777778888888888877775431 1345677777777888888888888877653 13
Q ss_pred HHHHHHHHHhCCCcHHHHHHHHHHHH
Q 000156 936 GVLSDILKCLGDNKKHMRECTLTVLD 961 (2015)
Q Consensus 936 ~llp~ll~~L~D~k~~Vr~aa~~aL~ 961 (2015)
..++.++..+.|....||.+|..+|.
T Consensus 104 ~a~~~L~~~l~d~~~~vr~~A~~aL~ 129 (131)
T 1te4_A 104 RVRAAMEKLAETGTGFARKVAVNYLE 129 (131)
T ss_dssp HHHHHHHHHTTSCCTHHHHHHHHHGG
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHH
Confidence 45677778888888888888877764
No 94
>3nmw_A APC variant protein; ARMADIILO repeats domain, cell adhesion-cell cycle complex; 1.60A {Homo sapiens} PDB: 3nmx_A 3t7u_A 3au3_A 3qhe_A
Probab=95.05 E-value=0.19 Score=61.39 Aligned_cols=189 Identities=10% Similarity=0.012 Sum_probs=128.8
Q ss_pred hhhhhhccCChHHHHHHHHHHHHHhcCCCCCC-CC--hHHHHHHHHHHh-cccCHHHHHHHHHHHHHHHHHhhhcchhh-
Q 000156 289 GFWEGVKATKWSERKDAVAELTKLASTKRIAP-GD--FTEVCRTLKKLI-TDVNIAVAVEAIQAIGNLARGLRTHFSGS- 363 (2015)
Q Consensus 289 ~f~~~l~s~kWkeR~eaL~~L~~l~~~~ki~~-~~--y~~l~~~L~k~l-~D~N~~V~~~A~~~l~~La~~L~~~f~~~- 363 (2015)
.+...+.+.+-..+..|...|..|+....-.. .. -...++.|.+.+ ...+..+...|+.+|..|+..-...-...
T Consensus 131 ~LV~LL~s~~~~v~~~A~~aL~nLs~~~~~~~k~~i~~~G~Ip~Lv~lL~~~~~~~~~~~A~~aL~nLs~~~~~nk~~i~ 210 (354)
T 3nmw_A 131 ALVAQLKSESEDLQQVIASVLRNLSWRADVNSKKTLREVGSVKALMECALEVKKESTLKSVLSALWNLSAHCTENKADIC 210 (354)
T ss_dssp HHHHGGGCSCHHHHHHHHHHHHHHHTTCCHHHHHHHHHTTHHHHHHHHHHHCCCHHHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHCCCCHHHHHHHHHHHHHHhccCCHHHHHHHHHCCCHHHHHHHHhcCCCHHHHHHHHHHHHHHHccChhhhHHHH
Confidence 46666777888889999999998875311000 00 012355566654 35567788899999999987332211122
Q ss_pred -hHhHHHHHHHHhccCcH----HHHHHHHHHHHHHHHh--cCCC----h--HhHHHHHHHHhhcCChHHHHHHHHHHHHH
Q 000156 364 -SRFLLPVLLEKLKEKKP----TVAESLTQTLQAMHKA--GCLN----L--VDVVEDVKTSVKNKVPLVRSLTLNWVTFC 430 (2015)
Q Consensus 364 -~~~llp~LL~klkdkk~----~V~~aa~~aL~al~~~--~~~~----l--~~il~~l~~~L~~Knp~vR~~~l~~L~~~ 430 (2015)
....+|.|.+.+...+. .+++.+..+|..+..+ ++.. + ...++.+...|.+.+..++.+++..|..+
T Consensus 211 ~~~Gai~~Lv~lL~~~~~~~~~~v~~~A~~aL~nLs~~~a~~~~~~~~i~~~g~i~~Lv~lL~~~~~~v~~~A~~aL~nL 290 (354)
T 3nmw_A 211 AVDGALAFLVGTLTYRSQTNTLAIIESGGGILRNVSSLIATNEDHRQILRENNCLQTLLQHLKSHSLTIVSNACGTLWNL 290 (354)
T ss_dssp HSTTHHHHHHHHTTCCCSSSCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHTTTHHHHHHHHTTCSCHHHHHHHHHHHHHH
T ss_pred HhcCcHHHHHHHhccCCCcccHHHHHHHHHHHHHHHhhccCCHHHHHHHHHcCCHHHHHHHHcCCChHHHHHHHHHHHHH
Confidence 35789999999987654 4888888888888752 0111 0 13578888899999999999999999886
Q ss_pred HHhcChhHHHHhh-hhHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhCc
Q 000156 431 IETSSKAAVLKVH-KDYVPICMECLNDGTPEVRDAAFSVLAAIAKSVGM 478 (2015)
Q Consensus 431 l~~~~~~~l~~~l-~~l~p~l~k~L~Ds~~~VR~aA~~al~~l~~~~Ge 478 (2015)
.... ........ .-.+|.|+.+|.+.++.+|+.|..+|..+...-++
T Consensus 291 a~~~-~~~~~~i~~~G~i~~Lv~LL~s~~~~i~~~A~~aL~nL~~~~~~ 338 (354)
T 3nmw_A 291 SARN-PKDQEALWDMGAVSMLKNLIHSKHKMIAMGSAAALRNLMANRPA 338 (354)
T ss_dssp TSSC-HHHHHHHHHTTHHHHHHTTTTCSSHHHHHHHHHHHHHHHTTCCG
T ss_pred hCCC-HHHHHHHHHCCCHHHHHHHHhCCCHHHHHHHHHHHHHHHcCCHH
Confidence 4322 22222222 34689999999999999999999999988866443
No 95
>4ady_A RPN2, 26S proteasome regulatory subunit RPN2; protein binding, PC repeat; 2.70A {Saccharomyces cerevisiae} PDB: 4b4t_N
Probab=94.56 E-value=1.8 Score=58.54 Aligned_cols=159 Identities=14% Similarity=0.163 Sum_probs=98.6
Q ss_pred cCChHHHHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHhc---ccCHHHHHHHHHHHHHHHHHhhhcchhhhHhHHHHHH
Q 000156 296 ATKWSERKDAVAELTKLASTKRIAPGDFTEVCRTLKKLIT---DVNIAVAVEAIQAIGNLARGLRTHFSGSSRFLLPVLL 372 (2015)
Q Consensus 296 s~kWkeR~eaL~~L~~l~~~~ki~~~~y~~l~~~L~k~l~---D~N~~V~~~A~~~l~~La~~L~~~f~~~~~~llp~LL 372 (2015)
.++|. |..|+-.|.-|-. ++..+.+..|.+.+. ..+..+...|+-.||.+..|-+.. .+..|.
T Consensus 370 ~~~~~-k~sA~aSLGlIh~------g~~~~gl~~L~~yL~~~~s~~~~ik~GAllaLGli~ag~~~~-------~~~lL~ 435 (963)
T 4ady_A 370 AQNWA-KFTATASLGVIHK------GNLLEGKKVMAPYLPGSRASSRFIKGGSLYGLGLIYAGFGRD-------TTDYLK 435 (963)
T ss_dssp CCTHH-HHHHHHHHHHHTS------SCTTTHHHHHTTTSTTSCCSCHHHHHHHHHHHHHHTTTTTHH-------HHHHHH
T ss_pred cchHH-HHHHHHHhhhhcc------CchHHHHHHHHHhccccCCCcHHHHHHHHHHHHHhcCCCcHH-------HHHHHH
Confidence 46675 3455555544422 223345666777775 456788999999999998877642 334444
Q ss_pred HHhccCc--------HHHHHHHHHHHHHHHHhcCCChHhHHHHHHHHhhcCChHHHHHHHHHHHHHHHhcChhHHHHhhh
Q 000156 373 EKLKEKK--------PTVAESLTQTLQAMHKAGCLNLVDVVEDVKTSVKNKVPLVRSLTLNWVTFCIETSSKAAVLKVHK 444 (2015)
Q Consensus 373 ~klkdkk--------~~V~~aa~~aL~al~~~~~~~l~~il~~l~~~L~~Knp~vR~~~l~~L~~~l~~~~~~~l~~~l~ 444 (2015)
+.+.+.+ ..++.++.-+|.-++.- +.-+++++.|...+.+.++.++..+...|+.++-....... +.
T Consensus 436 ~~L~~~~~~~~~~~~~~ir~gAaLGLGla~~G--S~~eev~e~L~~~L~dd~~~~~~~AalALGli~vGTgn~~a---i~ 510 (963)
T 4ady_A 436 NIIVENSGTSGDEDVDVLLHGASLGIGLAAMG--SANIEVYEALKEVLYNDSATSGEAAALGMGLCMLGTGKPEA---IH 510 (963)
T ss_dssp HHHHHHSSCCSCHHHHHHHHHHHHHHHHHSTT--CCCHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHTTCCCHHH---HH
T ss_pred HHHcCccccccccccHHHHHHHHHHHHHHhcC--CCCHHHHHHHHHHHhcCCHHHHHHHHHHHhhhhcccCCHHH---HH
Confidence 4444433 56777776666655432 33467888888888877777887777777766544332211 23
Q ss_pred hHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhCc
Q 000156 445 DYVPICMECLNDGTPEVRDAAFSVLAAIAKSVGM 478 (2015)
Q Consensus 445 ~l~p~l~k~L~Ds~~~VR~aA~~al~~l~~~~Ge 478 (2015)
.++.. +++|.+..||..+.-+|+.++ +|.
T Consensus 511 ~LL~~---~~e~~~e~vrR~aalgLGll~--~g~ 539 (963)
T 4ady_A 511 DMFTY---SQETQHGNITRGLAVGLALIN--YGR 539 (963)
T ss_dssp HHHHH---HHHCSCHHHHHHHHHHHHHHT--TTC
T ss_pred HHHHH---HhccCcHHHHHHHHHHHHhhh--CCC
Confidence 33333 345777889988888887663 453
No 96
>3ldz_A STAM-1, signal transducing adapter molecule 1; ubiquitin-binding, cytoplasm, UBL conjugation, endosome, membrane, protein transport, SH3 domain; 2.60A {Homo sapiens} SCOP: a.118.9.0
Probab=94.54 E-value=0.25 Score=51.94 Aligned_cols=100 Identities=17% Similarity=0.292 Sum_probs=77.5
Q ss_pred cCCCChHHHHHHHHHHHHHHHhccccCCCCChhhHHHHHHhccccchHHHHHHHHHHHHHHHHHhChhhHHhh--hHHHH
Q 000156 862 LESPDWKVRLESIEAVNKILEEANKRIQPAGTGELFGGLRGRLYDSNKNLVMATLITLGAVASAMGPAVEKSS--KGVLS 939 (2015)
Q Consensus 862 l~d~~Wk~R~eale~L~~ll~~a~~~I~~~~~~eL~~~L~~rL~DsN~~V~~~Al~~l~~La~alg~~f~~~~--~~llp 939 (2015)
+.+.+|. ..-.|..++.. .+..-.+.+.+|++||+..|.+++..||.++..+++.+|..|...+ +.|+.
T Consensus 18 l~~~dw~----~ileicD~I~~-----~~~~~k~a~rai~Krl~~~n~~~ql~AL~LLe~~vkNcG~~f~~evas~~Fl~ 88 (140)
T 3ldz_A 18 NTAEDWG----LILDICDKVGQ-----SRTGPKDCLRSIMRRVNHKDPHVAMQALTLLGACVSNCGKIFHLEVCSRDFAS 88 (140)
T ss_dssp SSSCCHH----HHHHHHHHHTT-----STTHHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHSCHHHHHHHSSHHHHH
T ss_pred CCCcCHH----HHHHHHHHHHC-----CCcCHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHhcCHHHHHHHhhHHHHH
Confidence 4566895 34445555531 2233478999999999999999999999999999999999998543 56777
Q ss_pred HHHHHhCCCcHHHHHHHHHHHHHHHHhcCch
Q 000156 940 DILKCLGDNKKHMRECTLTVLDAWLAAVHLD 970 (2015)
Q Consensus 940 ~ll~~L~D~k~~Vr~aa~~aL~~i~~~~gl~ 970 (2015)
.+.+.+....+.|++-+...+..|....+-+
T Consensus 89 el~~l~~~~~~~Vk~kil~li~~W~~~f~~~ 119 (140)
T 3ldz_A 89 EVSNVLNKGHPKVCEKLKALMVEWTDEFKND 119 (140)
T ss_dssp HHHHHHHHSCHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHhccCCHHHHHHHHHHHHHHHHHhCCC
Confidence 6766666677889999999999999887533
No 97
>1vsy_5 Proteasome activator BLM10; 20S proteasome BLM10, hydrolase, nucleus, phosphoprotein, PR proteasome, threonine protease; 3.00A {Saccharomyces cerevisiae} PDB: 3l5q_6
Probab=94.51 E-value=2.4 Score=58.57 Aligned_cols=401 Identities=10% Similarity=0.018 Sum_probs=209.4
Q ss_pred hhhhHhhhcCCcHHHHHHHHHHHHHHHHHhchh-hh--hhHHHHHHHHHHhhcC-C-ChhHHHHHHHHHHHHHhhhhh--
Q 000156 54 GPLFKKTVADSNAPVQDKALDALIAYLKAADAD-AG--RYAKEVCDAIAAKCLT-G-RPKTVEKAQAVFMLWVELEAV-- 126 (2015)
Q Consensus 54 ~~~~~k~v~DsN~~vqe~~leal~~~l~~~~~~-~~--~~~~~v~~~LieK~l~-~-k~~~k~~a~~~ll~~~E~~~~-- 126 (2015)
.+.+..++.|+.-.-|-.|.|.+..++...... +. ...-.++..++.++|. + .+.+...=..|+-.....-+|
T Consensus 510 ~~~~e~L~~~~dk~~qr~aaEi~aGll~gsK~w~~~~~~~~w~~l~p~l~~~l~~~lt~et~~~W~~~i~~~~~~~DprR 589 (997)
T 1vsy_5 510 FELCESYYNKDDKASMIMSVEIVAGLVCGSKFMSVSDLDKRDTFIENFLAKCLDYELNHDAFEIWSTLAWWLPAVVDLRR 589 (997)
T ss_dssp HHHHHHTCCSSCHHHHHHHHHHHHHHSSCCSSCCTTTHHHHHHHHHHHHHHHHSSCCCTTHHHHHHHHHHHHHHHSCGGG
T ss_pred HHHHHHHhccccHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhccCCchhHHHHHHHHHHHhcCCChhh
Confidence 456677889999999999999998888665331 21 2345677778888886 3 555544322222222222223
Q ss_pred -hhHHHHHHH--H---hhcCChhhHHHHHHHHHHHHHHhCCCCcChhHHHhhhhhhhcCCChhHHHHHHHHHHHHHHHhC
Q 000156 127 -DVFLDVMEK--A---IKNKVAKAVVPAIDVMFQALSEFGAKIIPPKRILKMLPELFDHQDQNVRASSKGLTLELCRWIG 200 (2015)
Q Consensus 127 -~~v~~~L~~--~---~~~KnpKv~~~~l~~L~~~l~~fG~~~i~~k~il~~l~~ll~~~d~~VR~~a~~l~~ely~~lG 200 (2015)
..+++.|.. . ......=..+..+..|..++.+.|-+.-..++++..+. +.|+-++||++.-.++..++...-
T Consensus 590 ~~~L~e~l~~~~~~l~~~~~ssf~~~~rl~ll~~~l~~~~wr~~~~~~~l~~~~--l~h~y~~VRe~Ig~~L~~i~~~~~ 667 (997)
T 1vsy_5 590 SKTFFCHFINADGMFDRESDAATHQTSKIYMLRSILMSMEFRAPDVGKLFDELV--FDHPYDQVRQAVAKLLTTLVQNQS 667 (997)
T ss_dssp CHHHHHHHTCCCCCCCCCSSCCCCCCSSHHHHHHHHHHHTTSSCCCHHHHHHCC--SCCSCHHHHHHHHHHHHHHHHTSC
T ss_pred hHHHHHHHHHhhcccCCCCCcHHHHHHHHHHHHHHHHHhccccccHHHHHHHHH--hCCChHHHHHHHHHHHHHHHHhhc
Confidence 456665522 1 12223334556788899999999987555788887777 999999999999999998887662
Q ss_pred Cch---hhHHHh---h----------hChHHHHHHHHHHHHhcC---C---CCCCCccchhhhhH--hhhhhccccCCCC
Q 000156 201 KDP---VKTILF---E----------KMRDTMKKELEVELVNVS---G---TARPTRKIRAEQDK--ELGQELISEDVGP 256 (2015)
Q Consensus 201 ~~~---l~~~l~---~----------~Lk~~q~keLe~~f~k~~---~---~~~P~R~~rs~~~~--~~~~ea~~~~~~~ 256 (2015)
... ++..+- . ...+....-+.+.|++++ + ...|.-..++.... +....=-....+.
T Consensus 668 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~~l~~~~~~~~~~~~~~~~~s~y~~~~kTvl~wl~~~l~~ 747 (997)
T 1vsy_5 668 NPSISDPTTLLEAERNDPDGLGLPLKSVPEKVDAYIKKQFEIIKNLEDSVVGLNPQQFIKTDYFYRTSTIFYWIKEMARG 747 (997)
T ss_dssp CCCBSCHHHHHHHHHSCSSSSCCCSSCCCHHHHHHHHHHHHHHTGGGGTTSSCCSTTTTTSHHHHHHHHHHHHHHHHSSG
T ss_pred ccCCCCHHHHHHhhccccccccCccccCcchHHHHHHHHHHHHHHhhhcccccCccccchHHHHHHHHHHHHHHHHHhcC
Confidence 100 110000 0 000111111222222221 0 00010000000000 0000000000000
Q ss_pred CCCCCCCCCCCCCCCCCCCCCcccccccCcchhhhhhhccCChHHHHHH-HHHHHHHhcCCCCCCCChHHHHHHHHHHhc
Q 000156 257 GPSEESTADVPPEIDEYELVDPVDILTPLEKSGFWEGVKATKWSERKDA-VAELTKLASTKRIAPGDFTEVCRTLKKLIT 335 (2015)
Q Consensus 257 ~~~~~~~~~~~~~iD~~dl~~~vdIl~kl~~~~f~~~l~s~kWkeR~ea-L~~L~~l~~~~ki~~~~y~~l~~~L~k~l~ 335 (2015)
+. ...+-|| .... ++ | .+....+.++=.+-... ...+...++.--+.+.....++.+|.....
T Consensus 748 ~~--------~~~l~~~--~~~~-ll---P--~ll~l~~~~d~~eL~~~~a~~~l~~ls~~~~~~~~~~~~l~~l~~~~~ 811 (997)
T 1vsy_5 748 PN--------KVLLVPY--LVDY-VL---P--FLIGLVKHKDVCALASLDPVRLYAGLGYMPIRKNHVAAIVDYVCSSNV 811 (997)
T ss_dssp GG--------HHHHHHH--HTTT-TT---T--TTCTTSSCSHHHHHTTCCSHHHHHHTSSSCCCHHHHHHHHHHSSCTTT
T ss_pred CC--------ccchhhh--hHHH-HH---H--HHHHHhhcCcHHHHHhhHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHh
Confidence 00 0000000 0000 11 1 11111122211110000 011112222111222334456666666565
Q ss_pred -ccCHHHHHHHHHHHHHHHHHhhhcc--h-hhhHhHHHHHHHHhccCc-HHHHHHHHHHHHHHHHhcCC-ChHhHHHHHH
Q 000156 336 -DVNIAVAVEAIQAIGNLARGLRTHF--S-GSSRFLLPVLLEKLKEKK-PTVAESLTQTLQAMHKAGCL-NLVDVVEDVK 409 (2015)
Q Consensus 336 -D~N~~V~~~A~~~l~~La~~L~~~f--~-~~~~~llp~LL~klkdkk-~~V~~aa~~aL~al~~~~~~-~l~~il~~l~ 409 (2015)
+.+= .+..++..+..+.- ++-| . .....+...++..+.|+. ..||+.|..+|..++. |. ....+. .++
T Consensus 812 ~s~sW-~R~~~L~~lq~~~f--~n~f~l~~~~~~~i~~~v~~~L~D~q~~EVRe~Aa~tLsgll~--c~~~~~~~~-~li 885 (997)
T 1vsy_5 812 ALSSN-QTKLQLAFIQHFLS--AELLQLTEEEKNKILEFVVSNLYNEQFVEVRVRAASILSDIVH--NWKEEQPLL-SLI 885 (997)
T ss_dssp TSCSS-SHHHHHHHHHHHHH--HHTTTSCTTHHHHTHHHHTTTTTCSSCHHHHHHHHHHHHHHHH--SCCSHHHHH-HHH
T ss_pred cCCcH-HHHHHHHHHHHHHH--HHHHHcCHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHHHH--cCCchhhHH-HHH
Confidence 4454 66666666655543 2222 1 234577888888999999 9999999999999986 55 433333 333
Q ss_pred HHhhcCC----------------hHHHHHHHHHHHHHHHhcChhH-HHHhhhhHHHHHHHHhcCCCHHHHHHHHHHHHHH
Q 000156 410 TSVKNKV----------------PLVRSLTLNWVTFCIETSSKAA-VLKVHKDYVPICMECLNDGTPEVRDAAFSVLAAI 472 (2015)
Q Consensus 410 ~~L~~Kn----------------p~vR~~~l~~L~~~l~~~~~~~-l~~~l~~l~p~l~k~L~Ds~~~VR~aA~~al~~l 472 (2015)
..+..+- -..|-++..-|..++...|-.. ..+.++.++..|...++|+.+ |+..+.++++.|
T Consensus 886 ~~f~~~~~~~~~~~~~~~~~~~~~~~rH~aVLgL~AlV~a~Py~vP~P~w~P~~l~~La~~~~~~~~-i~~tvk~tlseF 964 (997)
T 1vsy_5 886 ERFAKGLDVNKYTSKERQKLSKTDIKIHGNVLGLGAIISAFPYVFPLPPWIPKNLSNLSSWARTSGM-TGNAAKNTISEF 964 (997)
T ss_dssp HHHTTSSTTTSSCHHHHHHHHHHCHHHHHHHHHHHHHHTTCSCCSSCCTHHHHHHHHHHTTSSSCSS-HHHHTHHHHHHH
T ss_pred HHHHHHHhhcccccccccccchHHHHHHHHHHHHHHHHhhCCCCCCCCcccHHHHHHHHHHhCCCCc-hHHHHHHHHHHH
Confidence 3333221 1355666777777777665432 245567777788888899665 999999999999
Q ss_pred HHHhCch
Q 000156 473 AKSVGMR 479 (2015)
Q Consensus 473 ~~~~Ge~ 479 (2015)
.+.--+.
T Consensus 965 krTH~D~ 971 (997)
T 1vsy_5 965 KKVRADT 971 (997)
T ss_dssp HHHTSTT
T ss_pred Hhccchh
Confidence 9876653
No 98
>1x5b_A Signal transducing adaptor molecule 2; VHS domain, ubiquitin binding, STAM2, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2l0t_B
Probab=94.43 E-value=0.38 Score=51.89 Aligned_cols=99 Identities=13% Similarity=0.292 Sum_probs=76.1
Q ss_pred cCCCChHHHHHHHHHHHHHHHhccccCCCCChhhHHHHHHhccccchHHHHHHHHHHHHHHHHHhChhhHHhh--hHHHH
Q 000156 862 LESPDWKVRLESIEAVNKILEEANKRIQPAGTGELFGGLRGRLYDSNKNLVMATLITLGAVASAMGPAVEKSS--KGVLS 939 (2015)
Q Consensus 862 l~d~~Wk~R~eale~L~~ll~~a~~~I~~~~~~eL~~~L~~rL~DsN~~V~~~Al~~l~~La~alg~~f~~~~--~~llp 939 (2015)
+.+.||.. .-.|.+++.. .+..-.+.+.+|++||+..|.+++..||.++..+++.+|..|...+ +.|+.
T Consensus 28 ~~~~Dw~~----~leicD~I~~-----~~~~~keA~ral~krl~~~n~~vql~AL~LLd~~vkNcG~~Fh~evas~~Fl~ 98 (163)
T 1x5b_A 28 NTTEDWSL----IMDICDKVGS-----TPNGAKDCLKAIMKRVNHKVPHVALQALTLLGACVANCGKIFHLEVCSRDFAT 98 (163)
T ss_dssp CSSCCHHH----HHHHHHHHHH-----SSSHHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHTCHHHHHHHTSHHHHH
T ss_pred CCCcCHHH----HHHHHHHHhC-----CCccHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhHHHHHHHhhHHHHH
Confidence 34568954 4456666652 1223478999999999999999999999999999999999998432 45776
Q ss_pred HHHHHhCC-CcHHHHHHHHHHHHHHHHhcCc
Q 000156 940 DILKCLGD-NKKHMRECTLTVLDAWLAAVHL 969 (2015)
Q Consensus 940 ~ll~~L~D-~k~~Vr~aa~~aL~~i~~~~gl 969 (2015)
.+.+.+.. ..+.|++.+...+..|....+-
T Consensus 99 el~~l~~~~~~~~Vk~kil~li~~W~~~f~~ 129 (163)
T 1x5b_A 99 EVRAVIKNKAHPKVCEKLKSLMVEWSEEFQK 129 (163)
T ss_dssp HHHHHHHTTCCHHHHHHHHHHHHHHHHHTTT
T ss_pred HHHHHHccCCCHHHHHHHHHHHHHHHHHhcC
Confidence 66666654 4578999999999999998763
No 99
>3gjx_A Exportin-1; transport, cytoplasm, nucleus, RNA-binding, acetylation, GTP-binding, HOST-virus interaction, nucleotide-binding, phosphoprotein; HET: GTP; 2.50A {Mus musculus} PDB: 3nby_A* 3nbz_A* 3nc0_A* 3nc1_A* 3gb8_A
Probab=94.20 E-value=3.5 Score=57.30 Aligned_cols=321 Identities=13% Similarity=0.161 Sum_probs=168.2
Q ss_pred hhHHHHHHHHHHHhhhChh---HHHHHHHHHhh---hCC---ChhHHHHH-HHHHHHHHHHhCCCCC-ChhhHHHHHHhc
Q 000156 698 TRAHAMKCLTTFSEAVGPG---FIFERLYKIMK---DHK---NPKVLSEG-ILWMVSAVEDFGVSHL-KLKDLIDFCKDT 766 (2015)
Q Consensus 698 ~r~~a~~~L~~l~e~~~~~---~Vl~~L~~~l~---~~K---npKv~~~~-l~~L~~li~~fG~~~l-~~k~li~~l~~~ 766 (2015)
..+++.=++.+++....++ .++..+++.+. +++ ..|.+..+ +.|+..-..+|-...- -++.++..+-..
T Consensus 495 ~lea~~~aigaIag~~~~~~E~~~Lp~vi~~Ll~L~e~~~~kd~k~~vas~i~~vlgrY~~wl~~h~~~L~~vl~~L~~~ 574 (1073)
T 3gjx_A 495 NLNTLCWAIGSISGAMHEEDEKRFLVTVIKDLLGLCEQKRGKDNKAIIASNIMYIVGQYPRFLRAHWKFLKTVVNKLFEF 574 (1073)
T ss_dssp HHHHHHHHHHHTTTSSCHHHHHHHHHHHHHHHHHHHHHSCSHHHHHHHHHHHHHHHHHCHHHHHHCHHHHHHHHHHHHHH
T ss_pred HHhHHHHHHHHHHCcCCcccccchHHHHHHHHhcccccccccchhHHHHHHHHHHHhhhHHHHHhCHHHHHHHHHHHHHH
Confidence 4555555666666655532 45666666553 333 34543333 3333222222211111 146677777775
Q ss_pred CCCCCchhHHHHHHHHHHHHHHHhChhHHhhhhh-cc---HHHHHHHHHHHhcCCCCCCCCCcccccCccccCCCCCCCC
Q 000156 767 GLQSSAAATRNATIKLLGALHKFVGPDIKGFLAD-VK---PALLSALDAEYEKNPFEGTVVPKKTVRASESTSSVSSGGS 842 (2015)
Q Consensus 767 gL~~sn~~VR~aA~~ll~~Ly~~~G~~l~~~L~~-lk---p~ll~~Le~ef~k~~~~~~p~p~R~~r~~~~~~s~~~~~~ 842 (2015)
+.++++.|.++|..++..+..-.+..+-....+ .. ..++..+..-+.+...+
T Consensus 575 -m~~~~~~vq~aA~~af~~i~~~C~~~lv~~~~~e~~p~i~~il~~~~~~~~~l~~~----------------------- 630 (1073)
T 3gjx_A 575 -MHETHDGVQDMACDTFIKIAQKCRRHFVQVQVGEVMPFIDEILNNINTIICDLQPQ----------------------- 630 (1073)
T ss_dssp -TTCCSTTHHHHHHHHHHHHHHHTGGGGTSCCTTCSSCHHHHHHTSHHHHHTTCCHH-----------------------
T ss_pred -HhcCCHHHHHHHHHHHHHHHHHHHHHHhhccccccchHHHHHHHHHHHHHHhcCHH-----------------------
Confidence 899999999999999998877666544221111 11 12233333333332110
Q ss_pred CCCCCcccccccchHHHHhc----CCC-ChHHHHHHHHHHHHHHHhccccCCCCChhhHHHHH---Hhccccch-HHHHH
Q 000156 843 DGLPREDISGKFTPTLVKSL----ESP-DWKVRLESIEAVNKILEEANKRIQPAGTGELFGGL---RGRLYDSN-KNLVM 913 (2015)
Q Consensus 843 d~lprvdIs~~L~~~ll~~l----~d~-~Wk~R~eale~L~~ll~~a~~~I~~~~~~eL~~~L---~~rL~DsN-~~V~~ 913 (2015)
.+ ..|++.+ +.- +-..|.+.++.+-...... +..++..- ...+.|.. .....
T Consensus 631 ------~~-----~~lyeav~~vi~~~p~~~~~~~~i~~Lm~~~~~~--------w~~l~~~~~~~~~~~~d~~~i~~l~ 691 (1073)
T 3gjx_A 631 ------QV-----HTFYEAVGYMIGAQTDQTVQEHLIEKYMLLPNQV--------WDSIIQQATKNVDILKDPETVKQLG 691 (1073)
T ss_dssp ------HH-----HHHHHHHHHHHTTCCCHHHHHHHHHHHTHHHHHH--------HHHHHHHHHHCGGGGGCHHHHHHHH
T ss_pred ------HH-----HHHHHHHHHHHHhCCCcchHHHHHHHHHHHHHHH--------HHHHHHHhhcCchhccChHHHHHHH
Confidence 00 0111110 010 1112233333222222110 11111111 11233432 23345
Q ss_pred HHHHHHHHHHHHhChhhHHhhhHHHHHHHHHhCC----------------Cc-H------HHHHHHHHHHHHHHHhcC--
Q 000156 914 ATLITLGAVASAMGPAVEKSSKGVLSDILKCLGD----------------NK-K------HMRECTLTVLDAWLAAVH-- 968 (2015)
Q Consensus 914 ~Al~~l~~La~alg~~f~~~~~~llp~ll~~L~D----------------~k-~------~Vr~aa~~aL~~i~~~~g-- 968 (2015)
..+++...+|.++|..|.+++..+.+.+++.++- .+ + .||.+....+.+++....
T Consensus 692 ~il~~n~~v~~~~g~~f~~~~~~i~~~~l~~y~~~s~~i~~~v~~~g~~~~~~~~~~~~r~ik~eil~l~~~~i~~~~~~ 771 (1073)
T 3gjx_A 692 SILKTNVRACKAVGHPFVIQLGRIYLDMLNVYKCLSENISAAIQANGEMVTKQPLIRSMRTVKRETLKLISGWVSRSNDP 771 (1073)
T ss_dssp HHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGGSSHHHHHHHHHHHHHHHHHHHHHTTCSCH
T ss_pred HHHhhhHHHHhhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhhccHHHHHHHHHHHHHHHHHHHHHhcCCCH
Confidence 5667888899999999999999999988876541 12 1 245555556666665442
Q ss_pred ---chhhHHHHHHHH-hc--CCCChhHH-HHHHHHHHHHhccCCC--CCChhhhHHHHHhh----cC---CCChHHHHHH
Q 000156 969 ---LDKMVPYVTTAL-TD--AKLGAEGR-KDLFDWLSKQLTGLSG--FPDAAHLLKPASIA----MT---DKSSDVRKAA 1032 (2015)
Q Consensus 969 ---l~~ll~~l~~~L-~~--~k~~p~~R-~~~l~~L~~~l~~~~~--~~~~~~ll~pl~~~----L~---D~~~~VR~aA 1032 (2015)
...++|.+.+.+ .+ .+ .|..| .++|..++..+.+++. .+.+..++..++.| ++ +..+|.|..-
T Consensus 772 ~~v~~~~i~pl~~~vl~dY~~~-~p~~r~~evL~l~s~iv~k~~~~~~~~~~~il~~vf~~Tl~mi~~~f~~~Pe~r~~f 850 (1073)
T 3gjx_A 772 QMVAENFVPPLLDAVLIDYQRN-VPAAREPEVLSTMAIIVNKLGGHITAEIPQIFDAVFECTLNMINKDFEEYPEHRTNF 850 (1073)
T ss_dssp HHHHHHTSHHHHHHTHHHHHHS-CGGGCCTHHHHHHHHHHHHHGGGTGGGHHHHHHHHHHHHHHHHSSCSSSCHHHHHHH
T ss_pred HHHHHHhHHHHHHHHHHHHhcC-CcccccHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHhCCcccCcHHHHHH
Confidence 234445444332 21 11 35566 6677777766666554 23455555554443 43 6789999999
Q ss_pred HHHHHHHHHHcChhHHHHHhccCChHHHHHHHHHH
Q 000156 1033 EACIVEILRAGGQETIEKNLKDIQGPALALILERI 1067 (2015)
Q Consensus 1033 ~~~L~~l~~~~G~~~~~~~l~~L~~~~~~~i~~~l 1067 (2015)
.+.+.++..+.-. .+-.|++...+.+.+.+
T Consensus 851 f~ll~~~~~~~f~-----~l~~l~~~~~~~~i~~i 880 (1073)
T 3gjx_A 851 FLLLQAVNSHCFP-----AFLAIPPAQFKLVLDSI 880 (1073)
T ss_dssp HHHHHHHHHHCGG-----GTTTSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhH-----HHHcCCHHHHHHHHHHH
Confidence 9999998887432 34457777767666654
No 100
>3grl_A General vesicular transport factor P115; vesicle transport, membrane trafficking, membrane tethering, fusion, snare, RAB GTPase, armadillo repeats; 2.00A {Bos taurus} PDB: 3gq2_A 2w3c_A
Probab=94.20 E-value=1.5 Score=56.64 Aligned_cols=309 Identities=15% Similarity=0.181 Sum_probs=176.6
Q ss_pred hhHHHHHHHHHHhhhcchh---hhHHHHHHHHHHHhhhChhHH---HHHHHHHhhh-CCChhHHHHHHHHHHHHHHHhCC
Q 000156 679 KKCVVLCLLGISERVADIK---TRAHAMKCLTTFSEAVGPGFI---FERLYKIMKD-HKNPKVLSEGILWMVSAVEDFGV 751 (2015)
Q Consensus 679 ~~~~~~il~~LveKlgD~K---~r~~a~~~L~~l~e~~~~~~V---l~~L~~~l~~-~KnpKv~~~~l~~L~~li~~fG~ 751 (2015)
++.+...++.|++++.+.. =|..|...|..++..+..... +..++..+.. ..+..+...+|+.|..++..-+.
T Consensus 16 ~qs~~etI~~L~~Rl~~~tl~eDRR~Av~~Lk~~sk~y~~~Vg~~~l~~li~~L~~d~~D~e~v~~~LetL~~l~~~~~~ 95 (651)
T 3grl_A 16 QHTEAETIQKLCDRVASSTLLDDRRNAVRALKSLSKKYRLEVGIQAMEHLIHVLQTDRSDSEIIGYALDTLYNIISNDEE 95 (651)
T ss_dssp --CHHHHHHHHHHHHHHCCSHHHHHHHHHHHHHTTTTTTTHHHHHTHHHHHHHHHSCTTCHHHHHHHHHHHHHHHCCC--
T ss_pred CCChhhHHHHHHHHHhhccchhHHHHHHHHHHHHHHHhHHHhhhhhHHHHHHHHhcccccHHHHHHHHHHHHHHhCCCCc
Confidence 3567788899999988754 377788888888776653322 4445555433 35677777788887776642111
Q ss_pred C-----------CC---------ChhhHHHHHHhcCCCCCchhHHHHHHHHHHHHHHHhChhHHhhhhhccHHHHHHHHH
Q 000156 752 S-----------HL---------KLKDLIDFCKDTGLQSSAAATRNATIKLLGALHKFVGPDIKGFLADVKPALLSALDA 811 (2015)
Q Consensus 752 ~-----------~l---------~~k~li~~l~~~gL~~sn~~VR~aA~~ll~~Ly~~~G~~l~~~L~~lkp~ll~~Le~ 811 (2015)
. .+ .-..-+..+..+ |+..+-.||-.++++|..|...-+...+..+ -.
T Consensus 96 ~~~~~~~~~~~~~~~~~~~d~f~~~~~~i~~Ll~l-L~~~df~vR~~alqlL~~L~~~r~~~~Q~~I-----------l~ 163 (651)
T 3grl_A 96 EEVEENSTRQSEDLGSQFTEIFIKQQENVTLLLSL-LEEFDFHVRWPGVKLLTSLLKQLGPQVQQII-----------LV 163 (651)
T ss_dssp ------------CHHHHHHHHHHHSTHHHHHHHHH-TTCCCHHHHHHHHHHHHHHHHHSHHHHHHHH-----------HH
T ss_pred ccccccccccchHHHHHHHHHHHcCCccHHHHHHH-hcCccHHHHHHHHHHHHHHHhcCcHHHHHHH-----------Hh
Confidence 0 00 002345666777 8999999999999999999866554333322 11
Q ss_pred HHhcCCCCCCCCCcccccCccccCCCCCCCCCCCCCcccccccchHHHHhcCCCChHHHHHHHHHHHHHHHhccccCCCC
Q 000156 812 EYEKNPFEGTVVPKKTVRASESTSSVSSGGSDGLPREDISGKFTPTLVKSLESPDWKVRLESIEAVNKILEEANKRIQPA 891 (2015)
Q Consensus 812 ef~k~~~~~~p~p~R~~r~~~~~~s~~~~~~d~lprvdIs~~L~~~ll~~l~d~~Wk~R~eale~L~~ll~~a~~~I~~~ 891 (2015)
.+. =.+.|+..+.|..-.+|.||+-.|..+... |..|+.-
T Consensus 164 ----~p~-----------------------------------gi~~Lv~lL~d~rE~iRneallLL~~Lt~~-n~~iQkl 203 (651)
T 3grl_A 164 ----SPM-----------------------------------GVSRLMDLLADSREVIRNDGVLLLQALTRS-NGAIQKI 203 (651)
T ss_dssp ----STT-----------------------------------HHHHHHGGGGCSSHHHHHHHHHHHHHHHTT-CHHHHHH
T ss_pred ----Ccc-----------------------------------cHHHHHHHHhCchHHHHHHHHHHHHHHhcC-CHHHHHH
Confidence 000 024678888999999999999999998863 3444421
Q ss_pred -ChhhHHHHHHhccccc----hHHHHHHHHHHHHHHHHHhChhhHHhhh--HHHHHHHHHhCCCcH-------HHHH--H
Q 000156 892 -GTGELFGGLRGRLYDS----NKNLVMATLITLGAVASAMGPAVEKSSK--GVLSDILKCLGDNKK-------HMRE--C 955 (2015)
Q Consensus 892 -~~~eL~~~L~~rL~Ds----N~~V~~~Al~~l~~La~alg~~f~~~~~--~llp~ll~~L~D~k~-------~Vr~--a 955 (2015)
-|...+..|...+..- ...|+.-++.++..|... .+.-..|.+ .++|.+...|..... .++. .
T Consensus 204 VAFEnaFe~Lf~Ii~~Eg~~~Ggivv~DCL~ll~nLLr~-N~sNQ~~FrEt~~i~~L~~LL~~~~~~~~W~~Qk~~N~~~ 282 (651)
T 3grl_A 204 VAFENAFERLLDIITEEGNSDGGIVVEDCLILLQNLLKN-NNSNQNFFKEGSYIQRMKPWFEVGDENSGWSAQKVTNLHL 282 (651)
T ss_dssp HHHTTHHHHHHHHHHHHTGGGSHHHHHHHHHHHHHHHTT-CHHHHHHHHHTTCGGGGGGGGCCCSCSSCCCHHHHHHHHH
T ss_pred HHHhccHHHHHHHHHhcCCCccchhHHHHHHHHHHHHhc-CHHHHHHHHHcCCHHHHHHHhCCCccccccHHHHHHHHHH
Confidence 1233444454444332 337788888888887754 211111111 144444444432211 1111 2
Q ss_pred HHHHHHHHHHhcCc-------------hhhHHHHHHHHhcCCCChhHHHHHHHHHHHHhccCCCC------------CCh
Q 000156 956 TLTVLDAWLAAVHL-------------DKMVPYVTTALTDAKLGAEGRKDLFDWLSKQLTGLSGF------------PDA 1010 (2015)
Q Consensus 956 a~~aL~~i~~~~gl-------------~~ll~~l~~~L~~~k~~p~~R~~~l~~L~~~l~~~~~~------------~~~ 1010 (2015)
+..++..++...+. ..+++.+...+-..+....+|.+++..++..+...+.. +..
T Consensus 283 ~L~iIrlLv~~~~~~~~t~~nQ~~~~~~g~l~~Ll~ll~~~~~p~~i~~~Al~tla~~irgN~~~Q~~fa~~~vp~~~~~ 362 (651)
T 3grl_A 283 MLQLVRVLVSPNNPPGATSSCQKAMFQCGLLQQLCTILMATGVPADILTETINTVSEVIRGCQVNQDYFASVNAPSNPPR 362 (651)
T ss_dssp HHHHHHHHTCTTSCHHHHHHHHHHHHHTTHHHHHHHHHTCSSCCHHHHHHHHHHHHHHHTTCHHHHHHHHHCEESSSSCE
T ss_pred HHHHHHHHhCCCCCCCCCHHHHHHHHHCCCHHHHHHHHccCCCCHHHHHHHHHHHHHHHhCCHHHHHHHhhccCCCCCCc
Confidence 33333333322110 12345556666555455678999999888877644321 011
Q ss_pred hhhHHHHHhhcCCC-ChHHHHHHHHHHHHHH
Q 000156 1011 AHLLKPASIAMTDK-SSDVRKAAEACIVEIL 1040 (2015)
Q Consensus 1011 ~~ll~pl~~~L~D~-~~~VR~aA~~~L~~l~ 1040 (2015)
..++..+...+.+. .-++|-+|..|+..+.
T Consensus 363 p~li~lL~~~~~~~~~~~lR~Aa~~cl~ay~ 393 (651)
T 3grl_A 363 PAIVVLLMSMVNERQPFVLRCAVLYCFQCFL 393 (651)
T ss_dssp EHHHHHHHHHTCTTSCHHHHHHHHHHHHHHH
T ss_pred ChHHHHHHHHhcccccHHHHHHHHHHHHHHH
Confidence 12222344445554 4689999999998765
No 101
>1lrv_A LRV, leucine-rich repeat variant; leucine-rich repeats, repetitive structure, iron sulfur proteins, nitrogen fixation; 2.60A {Azotobacter vinelandii} SCOP: a.118.1.5
Probab=94.14 E-value=0.022 Score=65.88 Aligned_cols=113 Identities=14% Similarity=0.095 Sum_probs=69.7
Q ss_pred HhcCCCChHHHHHHHHHHHHHHHhccccCCCCChhhHHHHHHhccccchHHHHHHHHHHHHHHHHHhChhhHHhhhHHHH
Q 000156 860 KSLESPDWKVRLESIEAVNKILEEANKRIQPAGTGELFGGLRGRLYDSNKNLVMATLITLGAVASAMGPAVEKSSKGVLS 939 (2015)
Q Consensus 860 ~~l~d~~Wk~R~eale~L~~ll~~a~~~I~~~~~~eL~~~L~~rL~DsN~~V~~~Al~~l~~La~alg~~f~~~~~~llp 939 (2015)
..+.|.+|.+|..+...+ . .+ .|...++|.+..|+..++.. ++. +
T Consensus 129 ~L~~D~d~~VR~~aA~~l-----------~----~~---~l~~l~~D~d~~VR~~aa~~-------l~~----------~ 173 (244)
T 1lrv_A 129 QMAADRDYLVRAYVVQRI-----------P----PG---RLFRFMRDEDRQVRKLVAKR-------LPE----------E 173 (244)
T ss_dssp GGTTCSSHHHHHHHHHHS-----------C----GG---GGGGTTTCSCHHHHHHHHHH-------SCG----------G
T ss_pred HHHcCCCHHHHHHHHHhc-----------C----HH---HHHHHHcCCCHHHHHHHHHc-------CCH----------H
Confidence 345778888888876521 1 11 23455678888888776653 221 2
Q ss_pred HHHHHhCCCcHHHHHHHHHHHHHHHHhcCchhhHHHHHHHHhcCCCChhHHHHHHHHHHHHhccCCCCCChhhhHHHHHh
Q 000156 940 DILKCLGDNKKHMRECTLTVLDAWLAAVHLDKMVPYVTTALTDAKLGAEGRKDLFDWLSKQLTGLSGFPDAAHLLKPASI 1019 (2015)
Q Consensus 940 ~ll~~L~D~k~~Vr~aa~~aL~~i~~~~gl~~ll~~l~~~L~~~k~~p~~R~~~l~~L~~~l~~~~~~~~~~~ll~pl~~ 1019 (2015)
.+...++|....||.++...+ +. +.+...+.++ ++.+|..+...+. .+.+.
T Consensus 174 ll~~ll~D~d~~VR~aaa~~l-------~~----~~L~~Ll~D~--d~~VR~~aa~~l~----------------~~~L~ 224 (244)
T 1lrv_A 174 SLGLMTQDPEPEVRRIVASRL-------RG----DDLLELLHDP--DWTVRLAAVEHAS----------------LEALR 224 (244)
T ss_dssp GGGGSTTCSSHHHHHHHHHHC-------CG----GGGGGGGGCS--SHHHHHHHHHHSC----------------HHHHH
T ss_pred HHHHHHcCCCHHHHHHHHHhC-------CH----HHHHHHHcCC--CHHHHHHHHHcCC----------------HHHHH
Confidence 233566888888888877652 22 2344446665 4788888776632 13333
Q ss_pred hcCCCChHHHHHHHHHH
Q 000156 1020 AMTDKSSDVRKAAEACI 1036 (2015)
Q Consensus 1020 ~L~D~~~~VR~aA~~~L 1036 (2015)
.|.|.++.||.+|...|
T Consensus 225 ~L~D~~~~VR~aa~~~L 241 (244)
T 1lrv_A 225 ELDEPDPEVRLAIAGRL 241 (244)
T ss_dssp HCCCCCHHHHHHHHCCC
T ss_pred HccCCCHHHHHHHHHHh
Confidence 34888888888887654
No 102
>3nmz_A APC variant protein; protein-protein complex, armadillo repeats, cell adhesion-CE complex; 3.01A {Homo sapiens}
Probab=94.01 E-value=0.5 Score=59.71 Aligned_cols=187 Identities=10% Similarity=0.017 Sum_probs=127.6
Q ss_pred hhhhhhccCChHHHHHHHHHHHHHhcCCCCCC-CC--hHHHHHHHHHHh-cccCHHHHHHHHHHHHHHHHHhhhcchhh-
Q 000156 289 GFWEGVKATKWSERKDAVAELTKLASTKRIAP-GD--FTEVCRTLKKLI-TDVNIAVAVEAIQAIGNLARGLRTHFSGS- 363 (2015)
Q Consensus 289 ~f~~~l~s~kWkeR~eaL~~L~~l~~~~ki~~-~~--y~~l~~~L~k~l-~D~N~~V~~~A~~~l~~La~~L~~~f~~~- 363 (2015)
.+...+.+.+=..+..|...|..|+....-.. .. -...++.|.+.+ ...+..+...|+.+|..|+.+-...-...
T Consensus 247 ~LV~LL~s~~~~v~~~A~~aL~nLs~~~~~~~k~~I~~~GaI~~LV~lLl~s~~~~v~~~A~~aL~nLs~~~~~nk~~I~ 326 (458)
T 3nmz_A 247 ALVAQLKSESEDLQQVIASVLRNLSWRADVNSKKTLREVGSVKALMECALEVKKESTLKSVLSALWNLSAHCTENKADIC 326 (458)
T ss_dssp HHHHGGGCSCHHHHHHHHHHHHHHTSSCCHHHHHHHHHTTHHHHHHHHHTTCCSHHHHHHHHHHHHHHHHHCHHHHHHHH
T ss_pred HHHHHHhCCCHHHHHHHHHHHHHHhcCCCHHHHHHHHHcCCHHHHHHHHhcCCCHHHHHHHHHHHHHHccCCHHHHHHHH
Confidence 46666777777888889998988864310000 00 012355666654 45577889999999999998432211122
Q ss_pred -hHhHHHHHHHHhccCcH----HHHHHHHHHHHHHHHh--cCCC----h--HhHHHHHHHHhhcCChHHHHHHHHHHHHH
Q 000156 364 -SRFLLPVLLEKLKEKKP----TVAESLTQTLQAMHKA--GCLN----L--VDVVEDVKTSVKNKVPLVRSLTLNWVTFC 430 (2015)
Q Consensus 364 -~~~llp~LL~klkdkk~----~V~~aa~~aL~al~~~--~~~~----l--~~il~~l~~~L~~Knp~vR~~~l~~L~~~ 430 (2015)
....+|.|.+.+...+. .+++.+..+|..+..+ ++.. + ...++.+...|.+.+..++.+++..|..+
T Consensus 327 ~~~Gal~~Lv~LL~~~~~~~~~~v~~~A~~aL~nLs~~~a~~~~~~~~i~~~G~i~~Lv~LL~~~~~~v~~~A~~aL~nL 406 (458)
T 3nmz_A 327 AVDGALAFLVGTLTYRSQTNTLAIIESGGGILRNVSSLIATNEDHRQILRENNCLQTLLQHLKSHSLTIVSNACGTLWNL 406 (458)
T ss_dssp HSTTHHHHHHHHTTCCCSSSTTHHHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHHHHSSCSCHHHHHHHHHHHHHH
T ss_pred HhcCcHHHHHHHhcCCCCcchHHHHHHHHHHHHHHHhcccCCHHHHHHHHHcccHHHHHHHHcCCChHHHHHHHHHHHHH
Confidence 24689999999987654 4888888889888752 1111 1 13467888889999999999999999887
Q ss_pred HHhcChhHHHHhh-hhHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHh
Q 000156 431 IETSSKAAVLKVH-KDYVPICMECLNDGTPEVRDAAFSVLAAIAKSV 476 (2015)
Q Consensus 431 l~~~~~~~l~~~l-~~l~p~l~k~L~Ds~~~VR~aA~~al~~l~~~~ 476 (2015)
.... ........ .-.+|.|+.+|...++.+|+.|..+|..+...-
T Consensus 407 a~~~-~~~~~~i~~~G~I~~Lv~LL~s~~~~v~~~Aa~AL~nL~~~~ 452 (458)
T 3nmz_A 407 SARN-PKDQEALWDMGAVSMLKNLIHSKHKMIAMGSAAALRNLMANR 452 (458)
T ss_dssp HSSC-HHHHHHHHHHTHHHHHHTTTTCSSHHHHHHHHHHHHHHHTCC
T ss_pred HcCC-HHHHHHHHHCCCHHHHHHHHhCCCHHHHHHHHHHHHHHHcCC
Confidence 5332 22222222 346899999999999999999999999887653
No 103
>3g2s_A C-terminal fragment of sortilin-related receptor; ADP-ribosylation factor binding protein GGA1, VHS, acidic- cluster dileucine signal, sorla; 1.70A {Homo sapiens} SCOP: a.118.9.2 PDB: 3g2t_A* 3g2u_A 3g2v_A* 3g2w_A 1ujk_A* 1jwf_A 1ujj_A 1jwg_A* 1py1_A*
Probab=93.89 E-value=0.55 Score=49.77 Aligned_cols=110 Identities=15% Similarity=0.234 Sum_probs=81.6
Q ss_pred cCCCChHHHHHHHHHHHHHHHhccccCCCCChhhHHHHHHhccccchHHHHHHHHHHHHHHHHHhChhhHHh--hhHHHH
Q 000156 862 LESPDWKVRLESIEAVNKILEEANKRIQPAGTGELFGGLRGRLYDSNKNLVMATLITLGAVASAMGPAVEKS--SKGVLS 939 (2015)
Q Consensus 862 l~d~~Wk~R~eale~L~~ll~~a~~~I~~~~~~eL~~~L~~rL~DsN~~V~~~Al~~l~~La~alg~~f~~~--~~~llp 939 (2015)
+.+.||. +.-.|.+++.. .+..-.+.+.+|++||+..|.+++..||.++..+++.+|..|... .+.|+.
T Consensus 24 l~~~dw~----~ileicD~I~~-----~~~~pk~a~ral~krl~~~n~~v~l~AL~LLe~cvkNCG~~fh~eias~~Fl~ 94 (149)
T 3g2s_A 24 NKELDWA----SINGFCEQLNE-----DFEGPPLATRLLAHKIQSPQEWEAIQALTVLETCMKSCGKRFHDEVGKFRFLN 94 (149)
T ss_dssp CSSCCHH----HHHHHHHHGGG-----SSSHHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHCCHHHHHHHTSHHHHH
T ss_pred CCCcCHH----HHHHHHHHHHC-----CCCcHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHhcCHHHHHHHhhHHHHH
Confidence 3556895 44445555532 223347899999999999999999999999999999999999653 466888
Q ss_pred HHHHHhCC------CcHHHHHHHHHHHHHHHHhcCchhhHHHHHHHH
Q 000156 940 DILKCLGD------NKKHMRECTLTVLDAWLAAVHLDKMVPYVTTAL 980 (2015)
Q Consensus 940 ~ll~~L~D------~k~~Vr~aa~~aL~~i~~~~gl~~ll~~l~~~L 980 (2015)
.+.+.+.+ ....|++-+...+..|....+-+.-+......|
T Consensus 95 eL~kl~~~k~~~~~~~~~Vk~kil~li~~W~~~f~~~p~i~~~Y~~L 141 (149)
T 3g2s_A 95 ELIKVVSPKYLGSRTSEKVKNKILELLYSWTVGLPEEVKIAEAYQML 141 (149)
T ss_dssp HHHHHHCTTTTGGGSCHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred HHHHHHcccccCCCCCHHHHHHHHHHHHHHHHHhCCCchHHHHHHHH
Confidence 88888875 457899999999999999875333233333333
No 104
>3gs3_A Symplekin, LD45768P; helix-turn-helix heat repeat extended loop, transcription, protein binding; 2.40A {Drosophila melanogaster}
Probab=93.66 E-value=6.9 Score=45.21 Aligned_cols=127 Identities=12% Similarity=0.158 Sum_probs=98.4
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHhhhcchhhhHhHHHHHHHHhccCc
Q 000156 300 SERKDAVAELTKLASTKRIAPGDFTEVCRTLKKLITDVNIAVAVEAIQAIGNLARGLRTHFSGSSRFLLPVLLEKLKEKK 379 (2015)
Q Consensus 300 keR~eaL~~L~~l~~~~ki~~~~y~~l~~~L~k~l~D~N~~V~~~A~~~l~~La~~L~~~f~~~~~~llp~LL~klkdkk 379 (2015)
.+|.+.|.+++.++-+. .+.-|.++++.+.....|.+..|+...+..|++.+.. + ..++..+++.|...+.|..
T Consensus 30 ~~kl~~L~qa~el~~~~--dp~ll~~~l~~il~~~~~~~~~vrk~~~~Fi~e~~~~---k-~~l~~~~l~~L~~Ll~d~d 103 (257)
T 3gs3_A 30 STKCELLAKVQETVLGS--CAELAEEFLESVLSLAHDSNMEVRKQVVAFVEQVCKV---K-VELLPHVINVVSMLLRDNS 103 (257)
T ss_dssp HHHHHHHHHHHHHHTTT--TGGGHHHHHHHHHGGGGCSCHHHHHHHHHHHHHHHHH---C-GGGHHHHHHHHHHHTTCSC
T ss_pred HHHHHHHHHHHHHHHcc--CHhHHHHHHHHHHHhccCChHHHHHHHHHHHHHHHHH---H-HHHHHHHHHHHHHHHcCCC
Confidence 68999999999976322 2346788888888877799999999988888887732 2 3578899999999999999
Q ss_pred HHHHHHHHHHHHHHHHh------cCCC-----------hHhHHHHHHHHhhcCChHHHHHHHHHHHHHHH
Q 000156 380 PTVAESLTQTLQAMHKA------GCLN-----------LVDVVEDVKTSVKNKVPLVRSLTLNWVTFCIE 432 (2015)
Q Consensus 380 ~~V~~aa~~aL~al~~~------~~~~-----------l~~il~~l~~~L~~Knp~vR~~~l~~L~~~l~ 432 (2015)
+.|...+..|...++.. .+.+ +..+-..|+.-+++.|..+|..+++|+.+++.
T Consensus 104 ~~V~K~~I~~~~~iY~~~l~~i~~~~~~~~~~~~~W~~m~~lK~~Il~~~~s~n~gvkl~~iKF~e~vIl 173 (257)
T 3gs3_A 104 AQVIKRVIQACGSIYKNGLQYLCSLMEPGDSAEQAWNILSLIKAQILDMIDNENDGIRTNAIKFLEGVVV 173 (257)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTSSSCCHHHHHHHHHHHHHHHHHHHGGGSSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCCcchHHHHHHHHHHHHHHHHHHHccCCcchHHHHHHHHHHHHH
Confidence 99999888888887765 1111 12233456666788999999999999999885
No 105
>3nmw_A APC variant protein; ARMADIILO repeats domain, cell adhesion-cell cycle complex; 1.60A {Homo sapiens} PDB: 3nmx_A 3t7u_A 3au3_A 3qhe_A
Probab=93.60 E-value=0.52 Score=57.60 Aligned_cols=172 Identities=11% Similarity=0.062 Sum_probs=114.2
Q ss_pred HHHHHHHHHHHHhcCCC-CCC--CChHHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHhhhcchhhh--HhHHHHHHHHh
Q 000156 301 ERKDAVAELTKLASTKR-IAP--GDFTEVCRTLKKLITDVNIAVAVEAIQAIGNLARGLRTHFSGSS--RFLLPVLLEKL 375 (2015)
Q Consensus 301 eR~eaL~~L~~l~~~~k-i~~--~~y~~l~~~L~k~l~D~N~~V~~~A~~~l~~La~~L~~~f~~~~--~~llp~LL~kl 375 (2015)
.|++|...|..|+.+.. ... ..++.+++.|...+...+..+...|+.+|..|+.+-.......+ ...+|.|++.+
T Consensus 100 ~q~~Aa~aL~nLa~~~~~~k~~i~~~~GaIp~LV~LL~s~~~~v~~~A~~aL~nLs~~~~~~~k~~i~~~G~Ip~Lv~lL 179 (354)
T 3nmw_A 100 LRRYAGMALTNLTFGDVANKATLCSMKGCMRALVAQLKSESEDLQQVIASVLRNLSWRADVNSKKTLREVGSVKALMECA 179 (354)
T ss_dssp HHHHHHHHHHHHTSSCHHHHHHHHHCHHHHHHHHHGGGCSCHHHHHHHHHHHHHHHTTCCHHHHHHHHHTTHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHcCCcHHHHHHHHCCCCHHHHHHHHHHHHHHhccCCHHHHHHHHHCCCHHHHHHHH
Confidence 47788888888874321 100 01345678888888888889999999999999864111111111 25689999874
Q ss_pred -ccCcHHHHHHHHHHHHHHHHhcCCC----h---HhHHHHHHHHhhcCCh----HHHHHHHHHHHHHHHh--cChhHHHH
Q 000156 376 -KEKKPTVAESLTQTLQAMHKAGCLN----L---VDVVEDVKTSVKNKVP----LVRSLTLNWVTFCIET--SSKAAVLK 441 (2015)
Q Consensus 376 -kdkk~~V~~aa~~aL~al~~~~~~~----l---~~il~~l~~~L~~Knp----~vR~~~l~~L~~~l~~--~~~~~l~~ 441 (2015)
+.....+++.+..+|..+..+ +.. + ...++.|...|.+.+. .++..++..|..+-.. ........
T Consensus 180 ~~~~~~~~~~~A~~aL~nLs~~-~~~nk~~i~~~~Gai~~Lv~lL~~~~~~~~~~v~~~A~~aL~nLs~~~a~~~~~~~~ 258 (354)
T 3nmw_A 180 LEVKKESTLKSVLSALWNLSAH-CTENKADICAVDGALAFLVGTLTYRSQTNTLAIIESGGGILRNVSSLIATNEDHRQI 258 (354)
T ss_dssp HHCCCHHHHHHHHHHHHHHHTT-CHHHHHHHHHSTTHHHHHHHHTTCCCSSSCCHHHHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred hcCCCHHHHHHHHHHHHHHHcc-ChhhhHHHHHhcCcHHHHHHHhccCCCcccHHHHHHHHHHHHHHHhhccCCHHHHHH
Confidence 556778888888888888653 111 1 2456777788876554 4888877776654331 12222111
Q ss_pred hh-hhHHHHHHHHhcCCCHHHHHHHHHHHHHHH
Q 000156 442 VH-KDYVPICMECLNDGTPEVRDAAFSVLAAIA 473 (2015)
Q Consensus 442 ~l-~~l~p~l~k~L~Ds~~~VR~aA~~al~~l~ 473 (2015)
.. .-.+|.|+..|.+.+.+|++.|..+|+.+.
T Consensus 259 i~~~g~i~~Lv~lL~~~~~~v~~~A~~aL~nLa 291 (354)
T 3nmw_A 259 LRENNCLQTLLQHLKSHSLTIVSNACGTLWNLS 291 (354)
T ss_dssp HHTTTHHHHHHHHTTCSCHHHHHHHHHHHHHHT
T ss_pred HHHcCCHHHHHHHHcCCChHHHHHHHHHHHHHh
Confidence 22 237899999999999999999999988775
No 106
>1mhq_A ADP-ribosylation factor binding protein GGA2; super helix, protein transport; 2.20A {Homo sapiens} SCOP: a.118.9.2
Probab=93.50 E-value=0.67 Score=49.11 Aligned_cols=111 Identities=14% Similarity=0.236 Sum_probs=83.4
Q ss_pred cCCCChHHHHHHHHHHHHHHHhccccCCCCChhhHHHHHHhccccchHHHHHHHHHHHHHHHHHhChhhHHh--hhHHHH
Q 000156 862 LESPDWKVRLESIEAVNKILEEANKRIQPAGTGELFGGLRGRLYDSNKNLVMATLITLGAVASAMGPAVEKS--SKGVLS 939 (2015)
Q Consensus 862 l~d~~Wk~R~eale~L~~ll~~a~~~I~~~~~~eL~~~L~~rL~DsN~~V~~~Al~~l~~La~alg~~f~~~--~~~llp 939 (2015)
+.+.||. ..-.|..++... +..-.+.+.+|++||+..|.+++..||.++..+++.+|..|... .+.|+.
T Consensus 14 l~~~dw~----~~leicD~I~~~-----~~~~k~a~rai~krl~~~n~~vql~AL~LLe~~vkNCG~~fh~evas~~Fl~ 84 (148)
T 1mhq_A 14 MSEQDWS----AIQNFCEQVNTD-----PNGPTHAPWLLAHKIQSPQEKEALYALTVLEMCMNHCGEKFHSEVAKFRFLN 84 (148)
T ss_dssp CSSCCHH----HHHHHHHHHHHS-----SHHHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHSCHHHHHHHTSHHHHH
T ss_pred CCCcCHH----HHHHHHHHHHcC-----CccHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHcCHHHHHHHhhHHHHH
Confidence 4457895 344566666531 22237889999999999999999999999999999999999754 367888
Q ss_pred HHHHHhCC------CcHHHHHHHHHHHHHHHHhcCchhhHHHHHHHHh
Q 000156 940 DILKCLGD------NKKHMRECTLTVLDAWLAAVHLDKMVPYVTTALT 981 (2015)
Q Consensus 940 ~ll~~L~D------~k~~Vr~aa~~aL~~i~~~~gl~~ll~~l~~~L~ 981 (2015)
.+.+.+.+ ....|++-+...+..|....+-+.-+..+...|.
T Consensus 85 eL~kl~~~k~~~~~~~~~Vk~kil~li~~W~~~f~~~p~i~~~y~~Lk 132 (148)
T 1mhq_A 85 ELIKVLSPKYLGSWATGKVKGRVIEILFSWTVWFPEDIKIRDAYQMLK 132 (148)
T ss_dssp HHHHTTCCSTTSCCCCHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HHHHHHccccCCCCCCHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHH
Confidence 88887765 3678999999999999998754333344444444
No 107
>1juq_A ADP-ribosylation factor binding protein GGA3; protein-peptide compelx, VHS domain, DXXLL sorting signal, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.9.2 PDB: 1jpl_A 1lf8_A*
Probab=93.47 E-value=0.63 Score=50.53 Aligned_cols=110 Identities=14% Similarity=0.218 Sum_probs=82.8
Q ss_pred CCCChHHHHHHHHHHHHHHHhccccCCCCChhhHHHHHHhccccchHHHHHHHHHHHHHHHHHhChhhHHh--hhHHHHH
Q 000156 863 ESPDWKVRLESIEAVNKILEEANKRIQPAGTGELFGGLRGRLYDSNKNLVMATLITLGAVASAMGPAVEKS--SKGVLSD 940 (2015)
Q Consensus 863 ~d~~Wk~R~eale~L~~ll~~a~~~I~~~~~~eL~~~L~~rL~DsN~~V~~~Al~~l~~La~alg~~f~~~--~~~llp~ 940 (2015)
.+.||. ..-.|..++... +..-.+.+.+|+++|+..|.+|+..||.++..+++.+|..|... .+.|+..
T Consensus 27 ~~~Dw~----~ileicD~I~~~-----~~~~k~A~ral~krl~~~n~~vql~AL~LLd~~vkNCG~~Fh~evas~~Fl~e 97 (171)
T 1juq_A 27 RQEDWE----YIIGFCDQINKE-----LEGPQIAVRLLAHKIQSPQEWEALQALTVLEACMKNCGRRFHNEVGKFRFLNE 97 (171)
T ss_dssp SSCCHH----HHHHHHHHHHHS-----TTHHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHSHHHHHHHHTSHHHHHH
T ss_pred CCcCHH----HHHHHHHHHHcC-----CccHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHcCHHHHHHHhhHHHHHH
Confidence 456895 444566666531 22347899999999999999999999999999999999999853 3557888
Q ss_pred HHHHhCC------CcHHHHHHHHHHHHHHHHhcCchhhHHHHHHHHh
Q 000156 941 ILKCLGD------NKKHMRECTLTVLDAWLAAVHLDKMVPYVTTALT 981 (2015)
Q Consensus 941 ll~~L~D------~k~~Vr~aa~~aL~~i~~~~gl~~ll~~l~~~L~ 981 (2015)
|++.+.. ....|++.+...+..|....+-+.-+..+...|+
T Consensus 98 L~kl~~~k~~~~~~~~~Vk~kil~li~~W~~~f~~~~~i~~~y~~Lk 144 (171)
T 1juq_A 98 LIKVVSPKYLGDRVSEKVKTKVIELLYSWTMALPEEAKIKDAYHMLK 144 (171)
T ss_dssp HHHHHCCCCCCTTSCHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HHHHhccccCCCCCCHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHH
Confidence 8887763 3578999999999999998864443444444444
No 108
>3nmz_A APC variant protein; protein-protein complex, armadillo repeats, cell adhesion-CE complex; 3.01A {Homo sapiens}
Probab=93.28 E-value=0.57 Score=59.20 Aligned_cols=172 Identities=11% Similarity=0.069 Sum_probs=114.8
Q ss_pred HHHHHHHHHHHHhcCCCCCCC---ChHHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHhhhcchhhh--HhHHHHHHHHh
Q 000156 301 ERKDAVAELTKLASTKRIAPG---DFTEVCRTLKKLITDVNIAVAVEAIQAIGNLARGLRTHFSGSS--RFLLPVLLEKL 375 (2015)
Q Consensus 301 eR~eaL~~L~~l~~~~ki~~~---~y~~l~~~L~k~l~D~N~~V~~~A~~~l~~La~~L~~~f~~~~--~~llp~LL~kl 375 (2015)
.+++|...|..|+.+..-... .++..++.|...+...+..+...|+.+|..|+.+-.......+ ...+|.|++.+
T Consensus 216 l~~~Aa~aL~nLa~~~~~~k~~i~~~~GaIp~LV~LL~s~~~~v~~~A~~aL~nLs~~~~~~~k~~I~~~GaI~~LV~lL 295 (458)
T 3nmz_A 216 LRRYAGMALTNLTFGDVANKATLCSMKGCMRALVAQLKSESEDLQQVIASVLRNLSWRADVNSKKTLREVGSVKALMECA 295 (458)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHCHHHHHHHHHGGGCSCHHHHHHHHHHHHHHTSSCCHHHHHHHHHTTHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCcccHHHHHHcCCcHHHHHHHHhCCCHHHHHHHHHHHHHHhcCCCHHHHHHHHHcCCHHHHHHHH
Confidence 467888888888743211110 1345678888888888888999999999999753111111111 25789999975
Q ss_pred -ccCcHHHHHHHHHHHHHHHHhcCCC----h---HhHHHHHHHHhhcCCh----HHHHHHHHHHHHHHHh--cChhHHHH
Q 000156 376 -KEKKPTVAESLTQTLQAMHKAGCLN----L---VDVVEDVKTSVKNKVP----LVRSLTLNWVTFCIET--SSKAAVLK 441 (2015)
Q Consensus 376 -kdkk~~V~~aa~~aL~al~~~~~~~----l---~~il~~l~~~L~~Knp----~vR~~~l~~L~~~l~~--~~~~~l~~ 441 (2015)
......+++.+..+|..+..+ +.. + ...++.|...|.+... .++..++..|..+-.. ........
T Consensus 296 l~s~~~~v~~~A~~aL~nLs~~-~~~nk~~I~~~~Gal~~Lv~LL~~~~~~~~~~v~~~A~~aL~nLs~~~a~~~~~~~~ 374 (458)
T 3nmz_A 296 LEVKKESTLKSVLSALWNLSAH-CTENKADICAVDGALAFLVGTLTYRSQTNTLAIIESGGGILRNVSSLIATNEDHRQI 374 (458)
T ss_dssp TTCCSHHHHHHHHHHHHHHHHH-CHHHHHHHHHSTTHHHHHHHHTTCCCSSSTTHHHHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred hcCCCHHHHHHHHHHHHHHccC-CHHHHHHHHHhcCcHHHHHHHhcCCCCcchHHHHHHHHHHHHHHHhcccCCHHHHHH
Confidence 556778888888899888764 211 1 2456777777876543 4888887777664431 12222211
Q ss_pred hh-hhHHHHHHHHhcCCCHHHHHHHHHHHHHHH
Q 000156 442 VH-KDYVPICMECLNDGTPEVRDAAFSVLAAIA 473 (2015)
Q Consensus 442 ~l-~~l~p~l~k~L~Ds~~~VR~aA~~al~~l~ 473 (2015)
.. .-.+|.|+.+|.+.+.+|++.|..+|+.+.
T Consensus 375 i~~~G~i~~Lv~LL~~~~~~v~~~A~~aL~nLa 407 (458)
T 3nmz_A 375 LRENNCLQTLLQHLKSHSLTIVSNACGTLWNLS 407 (458)
T ss_dssp HHHTTHHHHHHHHSSCSCHHHHHHHHHHHHHHH
T ss_pred HHHcccHHHHHHHHcCCChHHHHHHHHHHHHHH
Confidence 11 346899999999999999999999998775
No 109
>1elk_A Target of MYB1; superhelix of helices, endocytosis/exocytosis complex; 1.50A {Homo sapiens} SCOP: a.118.9.2
Probab=91.78 E-value=1.2 Score=47.55 Aligned_cols=99 Identities=17% Similarity=0.340 Sum_probs=74.6
Q ss_pred CCCChHHHHHHHHHHHHHHHhccccCCCCChhhHHHHHHhccc-cchHHHHHHHHHHHHHHHHHhChhhHHh--hhHHHH
Q 000156 863 ESPDWKVRLESIEAVNKILEEANKRIQPAGTGELFGGLRGRLY-DSNKNLVMATLITLGAVASAMGPAVEKS--SKGVLS 939 (2015)
Q Consensus 863 ~d~~Wk~R~eale~L~~ll~~a~~~I~~~~~~eL~~~L~~rL~-DsN~~V~~~Al~~l~~La~alg~~f~~~--~~~llp 939 (2015)
.+.||.. .-.|.++++. .+..-.+.+.+|++||+ ..|..++..||.++..+++.+|+.|... .+.|+.
T Consensus 30 ~~~Dw~~----~leicD~I~~-----~~~~~k~a~ral~krl~~~~n~~v~l~AL~LLd~~vkNcG~~fh~eva~~~fl~ 100 (157)
T 1elk_A 30 QSEDWAL----NMEICDIINE-----TEEGPKDALRAVKKRIVGNKNFHEVMLALTVLETCVKNCGHRFHVLVASQDFVE 100 (157)
T ss_dssp SSCCHHH----HHHHHHHHHH-----SSSHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHSCHHHHHHHTSHHHHH
T ss_pred CCcCHHH----HHHHHHHHhC-----CCccHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHhCHHHHHHHhhHHHHH
Confidence 4568854 4445556642 12234789999999997 6899999999999999999999999863 345777
Q ss_pred H-HHHHhCC---CcHHHHHHHHHHHHHHHHhcCch
Q 000156 940 D-ILKCLGD---NKKHMRECTLTVLDAWLAAVHLD 970 (2015)
Q Consensus 940 ~-ll~~L~D---~k~~Vr~aa~~aL~~i~~~~gl~ 970 (2015)
. +++.+.. ....|++.+...+..|....+-+
T Consensus 101 e~Lvk~~~~k~~~~~~Vk~kil~li~~W~~~f~~~ 135 (157)
T 1elk_A 101 SVLVRTILPKNNPPTIVHDKVLNLIQSWADAFRSS 135 (157)
T ss_dssp HHTHHHHSTTTCCCHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHhccCCCCcHHHHHHHHHHHHHHHHHcCCC
Confidence 6 5666643 34579999999999999987533
No 110
>3l9t_A Putative uncharacterized protein SMU.31; hypothetical protein, unknown function; HET: EPE; 2.21A {Streptococcus mutans}
Probab=91.67 E-value=1.2 Score=50.45 Aligned_cols=90 Identities=16% Similarity=0.146 Sum_probs=61.8
Q ss_pred HhcCCCChHHHHHHHHHHHHHHHhccccCCCCChhhHHHHHHh-ccccchHHHHHHHHHHHHHHHHHhChhhHHhhhHHH
Q 000156 860 KSLESPDWKVRLESIEAVNKILEEANKRIQPAGTGELFGGLRG-RLYDSNKNLVMATLITLGAVASAMGPAVEKSSKGVL 938 (2015)
Q Consensus 860 ~~l~d~~Wk~R~eale~L~~ll~~a~~~I~~~~~~eL~~~L~~-rL~DsN~~V~~~Al~~l~~La~alg~~f~~~~~~ll 938 (2015)
....+....+|.-|+..|..+ .. ..+++..++. .-.|.+..|+..+...++.++...+++ ..+
T Consensus 78 ~L~~~~~deVR~~Av~lLg~~---------~~-~~~~L~~ir~~va~D~~WrVre~lA~a~~~~~~~~~pe------~~l 141 (240)
T 3l9t_A 78 LAYQSDVYQVRMYAVFLFGYL---------SK-DKEILIFMRDEVSKDNNWRVQEVLAKAFDEFCKKIEYK------KAL 141 (240)
T ss_dssp HHHTCSSHHHHHHHHHHHHHT---------TT-SHHHHHHHHHTGGGCSCHHHHHHHHHHHHHHHHHHCTT------TTH
T ss_pred HHHhCcchHHHHHHHHHHHhc---------cC-cHHHHHHHHHHhCCCCCccHHHHHHHHHHHHHHhcCHH------HHH
Confidence 334556678888887744432 12 2677777777 447888888888888888777655544 256
Q ss_pred HHHHHHhCCCcHHHHHHHHHHHHHHHH
Q 000156 939 SDILKCLGDNKKHMRECTLTVLDAWLA 965 (2015)
Q Consensus 939 p~ll~~L~D~k~~Vr~aa~~aL~~i~~ 965 (2015)
+.+..-+.|.+..||.+|.+.+.-|..
T Consensus 142 ~~~~~W~~d~n~~VRR~Ase~~rpW~~ 168 (240)
T 3l9t_A 142 PIIDEWLKSSNLHTRRAATEGLRIWTN 168 (240)
T ss_dssp HHHHHHHHCSSHHHHHHHHHHTCSGGG
T ss_pred HHHHHHhcCCCHHHHHHHHHhhHHHhc
Confidence 677778888888888888777655543
No 111
>3g2s_A C-terminal fragment of sortilin-related receptor; ADP-ribosylation factor binding protein GGA1, VHS, acidic- cluster dileucine signal, sorla; 1.70A {Homo sapiens} SCOP: a.118.9.2 PDB: 3g2t_A* 3g2u_A 3g2v_A* 3g2w_A 1ujk_A* 1jwf_A 1ujj_A 1jwg_A* 1py1_A*
Probab=90.41 E-value=0.57 Score=49.64 Aligned_cols=77 Identities=12% Similarity=0.162 Sum_probs=64.7
Q ss_pred hhhhHHHHHHHHhhcCChhhHHHHHHHHHHHHHHhCCCC---cChhHHHhhhhhhhcC------CChhHHHHHHHHHHHH
Q 000156 125 AVDVFLDVMEKAIKNKVAKAVVPAIDVMFQALSEFGAKI---IPPKRILKMLPELFDH------QDQNVRASSKGLTLEL 195 (2015)
Q Consensus 125 ~~~~v~~~L~~~~~~KnpKv~~~~l~~L~~~l~~fG~~~---i~~k~il~~l~~ll~~------~d~~VR~~a~~l~~el 195 (2015)
.+..++..|.+.+.|+||+++.-+|..|-.++++=|... |.-+.|+..|.+++.. .+..||+....++.+-
T Consensus 45 ~pk~a~ral~krl~~~n~~v~l~AL~LLe~cvkNCG~~fh~eias~~Fl~eL~kl~~~k~~~~~~~~~Vk~kil~li~~W 124 (149)
T 3g2s_A 45 GPPLATRLLAHKIQSPQEWEAIQALTVLETCMKSCGKRFHDEVGKFRFLNELIKVVSPKYLGSRTSEKVKNKILELLYSW 124 (149)
T ss_dssp HHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHCCHHHHHHHTSHHHHHHHHHHHCTTTTGGGSCHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHhcCHHHHHHHhhHHHHHHHHHHHcccccCCCCCHHHHHHHHHHHHHH
Confidence 467788899999999999999999999999999988632 4457899999999964 6899999999998887
Q ss_pred HHHhCC
Q 000156 196 CRWIGK 201 (2015)
Q Consensus 196 y~~lG~ 201 (2015)
+...+.
T Consensus 125 ~~~f~~ 130 (149)
T 3g2s_A 125 TVGLPE 130 (149)
T ss_dssp HHHCTT
T ss_pred HHHhCC
Confidence 776654
No 112
>3o2t_A Symplekin; heat repeat, scaffold, protein binding; 1.40A {Homo sapiens} PDB: 3odr_A 3ods_A 4h3k_A* 3o2s_A 3o2q_A* 4h3h_A*
Probab=90.41 E-value=10 Score=46.31 Aligned_cols=127 Identities=14% Similarity=0.125 Sum_probs=95.7
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHhhhcchhhhHhHHHHHHHHhccCc
Q 000156 300 SERKDAVAELTKLASTKRIAPGDFTEVCRTLKKLITDVNIAVAVEAIQAIGNLARGLRTHFSGSSRFLLPVLLEKLKEKK 379 (2015)
Q Consensus 300 keR~eaL~~L~~l~~~~ki~~~~y~~l~~~L~k~l~D~N~~V~~~A~~~l~~La~~L~~~f~~~~~~llp~LL~klkdkk 379 (2015)
.+|.+.|.+++.|+-+. .+.-|.++++.+.....|.+..|+...+..|++.+.. + ..++..+++.|...+.|..
T Consensus 40 ~~Kl~~L~q~~EL~l~~--dpsLl~~fl~~il~f~~d~~~~vRk~~a~FieEa~~~---~-~el~~~~l~~L~~LL~d~d 113 (386)
T 3o2t_A 40 DSKITVLKQVQELIINK--DPTLLDNFLDEIIAFQADKSIEVRKFVIGFIEEACKR---D-IELLLKLIANLNMLLRDEN 113 (386)
T ss_dssp THHHHHHHHHHHHHHTT--CGGGGGGGHHHHHGGGGCSCHHHHHHHHHHHHHHHHH---C-GGGHHHHHHHHHHHHTCSS
T ss_pred HHHHHHHHHHHHHHhcc--CHHHHHHHHHHHHHhccCCcHHHHHHHHHHHHHHHHH---H-HHHHHHHHHHHHHHHcCCC
Confidence 58999999999965211 2234667777777777799999999999999888752 2 2457888899999999999
Q ss_pred HHHHHHHHHHHHHHHHh------cCCC-----------hHhHHHHHHHHhhcCChHHHHHHHHHHHHHHH
Q 000156 380 PTVAESLTQTLQAMHKA------GCLN-----------LVDVVEDVKTSVKNKVPLVRSLTLNWVTFCIE 432 (2015)
Q Consensus 380 ~~V~~aa~~aL~al~~~------~~~~-----------l~~il~~l~~~L~~Knp~vR~~~l~~L~~~l~ 432 (2015)
+.|...+..|...++.. .+.. +..+-..|+..+++.|..+|..|++|+.+++.
T Consensus 114 ~~V~K~~I~~~tslYpl~f~~i~~~~~~~~~~e~~W~~m~~lK~~Il~~~ds~n~GVrl~aiKFle~VIl 183 (386)
T 3o2t_A 114 VNVVKKAILTMTQLYKVALQWMVKSRVISELQEACWDMVSAMAGDIILLLDSDNDGIRTHAIKFVEGLIV 183 (386)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHHGGGCSSHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCcchhHHHHHHHHHHHHHHHHHHhccCCcchHHHHHHHHHHHHH
Confidence 99988888888777743 0111 12344566677788999999999999999885
No 113
>3l9t_A Putative uncharacterized protein SMU.31; hypothetical protein, unknown function; HET: EPE; 2.21A {Streptococcus mutans}
Probab=89.84 E-value=2.1 Score=48.40 Aligned_cols=149 Identities=16% Similarity=0.127 Sum_probs=107.5
Q ss_pred hhhHHHHHHhccccchHHHHHHHHHHHHHHHHHhChhhHHhhhHHHHHHHH-HhCCCcHHHHHHHHHHHHHHHHhcCchh
Q 000156 893 TGELFGGLRGRLYDSNKNLVMATLITLGAVASAMGPAVEKSSKGVLSDILK-CLGDNKKHMRECTLTVLDAWLAAVHLDK 971 (2015)
Q Consensus 893 ~~eL~~~L~~rL~DsN~~V~~~Al~~l~~La~alg~~f~~~~~~llp~ll~-~L~D~k~~Vr~aa~~aL~~i~~~~gl~~ 971 (2015)
..+++........|..-.|+..|+.+++.+ . ....+++.+.. .-.|..=-||+.+..++..++...+++.
T Consensus 69 ~~~~~~la~~L~~~~~deVR~~Av~lLg~~-~--------~~~~~L~~ir~~va~D~~WrVre~lA~a~~~~~~~~~pe~ 139 (240)
T 3l9t_A 69 GEYIKKLAFLAYQSDVYQVRMYAVFLFGYL-S--------KDKEILIFMRDEVSKDNNWRVQEVLAKAFDEFCKKIEYKK 139 (240)
T ss_dssp HHHHHHHHHHHHTCSSHHHHHHHHHHHHHT-T--------TSHHHHHHHHHTGGGCSCHHHHHHHHHHHHHHHHHHCTTT
T ss_pred HHHHHHHHHHHHhCcchHHHHHHHHHHHhc-c--------CcHHHHHHHHHHhCCCCCccHHHHHHHHHHHHHHhcCHHH
Confidence 356666666666777778999999977765 1 23567777776 5567777899999999999998888888
Q ss_pred hHHHHHHHHhcCCCChhHHHHHHHHHHHHhccCCCCCChhhhHHH-HHhhcCCCChHHHHHHHHHHHHHHHHcChhHHHH
Q 000156 972 MVPYVTTALTDAKLGAEGRKDLFDWLSKQLTGLSGFPDAAHLLKP-ASIAMTDKSSDVRKAAEACIVEILRAGGQETIEK 1050 (2015)
Q Consensus 972 ll~~l~~~L~~~k~~p~~R~~~l~~L~~~l~~~~~~~~~~~ll~p-l~~~L~D~~~~VR~aA~~~L~~l~~~~G~~~~~~ 1050 (2015)
.++.+..-+.++ |+.+|..++..+.. +............+.| |-....|++.-||++..-.|..+.+.-+ +.+..
T Consensus 140 ~l~~~~~W~~d~--n~~VRR~Ase~~rp-W~~~~~~k~dp~~ll~iL~~L~~D~s~yVrKSVan~LrD~SK~~P-d~V~~ 215 (240)
T 3l9t_A 140 ALPIIDEWLKSS--NLHTRRAATEGLRI-WTNRPYFKENPNEAIRRIADLKEDVSEYVRKSVGNALRDISKKFP-DLVKI 215 (240)
T ss_dssp THHHHHHHHHCS--SHHHHHHHHHHTCS-GGGSTTTTTCHHHHHHHHHTTTTCSCHHHHHHHHHHHHHHHTTCH-HHHHH
T ss_pred HHHHHHHHhcCC--CHHHHHHHHHhhHH-HhccchhhcCHHHHHHHHHHhcCChHHHHHHHHHHHHHHHhhhCH-HHHHH
Confidence 888888888887 68999988887653 2222222233444555 5556799999999999999988766644 45566
Q ss_pred Hhcc
Q 000156 1051 NLKD 1054 (2015)
Q Consensus 1051 ~l~~ 1054 (2015)
++..
T Consensus 216 ~~~~ 219 (240)
T 3l9t_A 216 ELKN 219 (240)
T ss_dssp HHHT
T ss_pred HHHH
Confidence 6654
No 114
>3gs3_A Symplekin, LD45768P; helix-turn-helix heat repeat extended loop, transcription, protein binding; 2.40A {Drosophila melanogaster}
Probab=89.77 E-value=19 Score=41.61 Aligned_cols=152 Identities=11% Similarity=0.062 Sum_probs=105.8
Q ss_pred HHHHhcCCCChHHHHHHHHHHHHHHHhccccCCCCChhhHHHHHHhccccchHHHHHHHHHHHHHHHHHhChhhHHhhhH
Q 000156 857 TLVKSLESPDWKVRLESIEAVNKILEEANKRIQPAGTGELFGGLRGRLYDSNKNLVMATLITLGAVASAMGPAVEKSSKG 936 (2015)
Q Consensus 857 ~ll~~l~d~~Wk~R~eale~L~~ll~~a~~~I~~~~~~eL~~~L~~rL~DsN~~V~~~Al~~l~~La~alg~~f~~~~~~ 936 (2015)
+++.......-.+|.+.|.++++++-.. .|..|.++++.+.....|.+..|+......|.+.+.. =..++..
T Consensus 19 ~lln~A~~~~~~~kl~~L~qa~el~~~~----dp~ll~~~l~~il~~~~~~~~~vrk~~~~Fi~e~~~~----k~~l~~~ 90 (257)
T 3gs3_A 19 DWCNELVIASPSTKCELLAKVQETVLGS----CAELAEEFLESVLSLAHDSNMEVRKQVVAFVEQVCKV----KVELLPH 90 (257)
T ss_dssp HHHHHHTTCCHHHHHHHHHHHHHHHTTT----TGGGHHHHHHHHHGGGGCSCHHHHHHHHHHHHHHHHH----CGGGHHH
T ss_pred HHHHHhhhcCcHHHHHHHHHHHHHHHcc----CHhHHHHHHHHHHHhccCChHHHHHHHHHHHHHHHHH----HHHHHHH
Confidence 4555544422269999999999987532 3556788888888877899999999999988887733 1357778
Q ss_pred HHHHHHHHhCCCcHHHHHHHHHHHHHHHHhcCchhhHHHHHHHHh-cCCCChhHHHHHHHHHHHHhccCCCCCChhhhHH
Q 000156 937 VLSDILKCLGDNKKHMRECTLTVLDAWLAAVHLDKMVPYVTTALT-DAKLGAEGRKDLFDWLSKQLTGLSGFPDAAHLLK 1015 (2015)
Q Consensus 937 llp~ll~~L~D~k~~Vr~aa~~aL~~i~~~~gl~~ll~~l~~~L~-~~k~~p~~R~~~l~~L~~~l~~~~~~~~~~~ll~ 1015 (2015)
.++.+...|.|..+.|...++.|...++.. +...+. ++. .+..-..+|.|+... + .
T Consensus 91 ~l~~L~~Ll~d~d~~V~K~~I~~~~~iY~~---------~l~~i~~~~~-~~~~~~~~W~~m~~l----------K---~ 147 (257)
T 3gs3_A 91 VINVVSMLLRDNSAQVIKRVIQACGSIYKN---------GLQYLCSLME-PGDSAEQAWNILSLI----------K---A 147 (257)
T ss_dssp HHHHHHHHTTCSCHHHHHHHHHHHHHHHHH---------HHHHHTTSSS-CCHHHHHHHHHHHHH----------H---H
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHH---------HHHHHhcCCC-CcchHHHHHHHHHHH----------H---H
Confidence 889999999999999999998888777543 333332 332 122336677777642 1 1
Q ss_pred HHHhhcCCCChHHHHHHHHHHHHH
Q 000156 1016 PASIAMTDKSSDVRKAAEACIVEI 1039 (2015)
Q Consensus 1016 pl~~~L~D~~~~VR~aA~~~L~~l 1039 (2015)
-++..+...+..||-.+.+.+..+
T Consensus 148 ~Il~~~~s~n~gvkl~~iKF~e~v 171 (257)
T 3gs3_A 148 QILDMIDNENDGIRTNAIKFLEGV 171 (257)
T ss_dssp HHHHGGGSSCHHHHHHHHHHHHHH
T ss_pred HHHHHHccCCcchHHHHHHHHHHH
Confidence 244456678889998888766554
No 115
>3zyq_A Hepatocyte growth factor-regulated tyrosine kinas substrate; signaling; 1.48A {Homo sapiens} PDB: 4avx_A*
Probab=89.24 E-value=2.8 Score=47.60 Aligned_cols=98 Identities=18% Similarity=0.360 Sum_probs=71.6
Q ss_pred cCCCChHHHHHHHHHHHHHHHhccccCCCCChhhHHHHHHhccccchHHHHHHHHHHHHHHHHHhChhhHHh--hhHHHH
Q 000156 862 LESPDWKVRLESIEAVNKILEEANKRIQPAGTGELFGGLRGRLYDSNKNLVMATLITLGAVASAMGPAVEKS--SKGVLS 939 (2015)
Q Consensus 862 l~d~~Wk~R~eale~L~~ll~~a~~~I~~~~~~eL~~~L~~rL~DsN~~V~~~Al~~l~~La~alg~~f~~~--~~~llp 939 (2015)
+.+.||. .+-.|-+++.. .+..-.+.+.+|+++|+..|.+++..||.++..+++..|..|... .+.|+.
T Consensus 21 ~~~~dw~----~ileicD~I~~-----~~~~~k~a~ral~krl~~~n~~v~l~aL~LLe~~vkNcG~~f~~eias~~fl~ 91 (226)
T 3zyq_A 21 LLETDWE----SILQICDLIRQ-----GDTQAKYAVNSIKKKVNDKNPHVALYALEVMESVVKNCGQTVHDEVANKQTME 91 (226)
T ss_dssp CSSCCHH----HHHHHHHHHHT-----TSSCHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHHCHHHHHHHSSHHHHH
T ss_pred CCCcCHH----HHHHHHHHHhC-----CCccHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHhcchHHHHhhccHHHHH
Confidence 3456885 44456666642 122247899999999999999999999999999999999988743 344555
Q ss_pred HHHHHhCC-CcHHHHHHHHHHHHHHHHhcC
Q 000156 940 DILKCLGD-NKKHMRECTLTVLDAWLAAVH 968 (2015)
Q Consensus 940 ~ll~~L~D-~k~~Vr~aa~~aL~~i~~~~g 968 (2015)
.|.+.++. ....|++-+...+..|.....
T Consensus 92 ~l~~l~~~~~~~~Vk~kil~li~~W~~~f~ 121 (226)
T 3zyq_A 92 ELKDLLKRQVEVNVRNKILYLIQAWAHAFR 121 (226)
T ss_dssp HHHHHHHHCCCHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHhccCCCHHHHHHHHHHHHHHHHHhC
Confidence 55444433 446788888888888887764
No 116
>1lrv_A LRV, leucine-rich repeat variant; leucine-rich repeats, repetitive structure, iron sulfur proteins, nitrogen fixation; 2.60A {Azotobacter vinelandii} SCOP: a.118.1.5
Probab=89.17 E-value=0.42 Score=55.13 Aligned_cols=65 Identities=18% Similarity=0.188 Sum_probs=46.4
Q ss_pred HhcCCCChHHHHHHHHHHHHHHHhccccCCCCChhhHHHHHHhccccchHHHHHHHHHHHHHHHHHhChhhHHhhhHHHH
Q 000156 860 KSLESPDWKVRLESIEAVNKILEEANKRIQPAGTGELFGGLRGRLYDSNKNLVMATLITLGAVASAMGPAVEKSSKGVLS 939 (2015)
Q Consensus 860 ~~l~d~~Wk~R~eale~L~~ll~~a~~~I~~~~~~eL~~~L~~rL~DsN~~V~~~Al~~l~~La~alg~~f~~~~~~llp 939 (2015)
..+.|.+|.+|.+++..+ . . ..|...+.|.++.|+..+...+ | +
T Consensus 177 ~ll~D~d~~VR~aaa~~l-----------~----~---~~L~~Ll~D~d~~VR~~aa~~l-------~-----------~ 220 (244)
T 1lrv_A 177 LMTQDPEPEVRRIVASRL-----------R----G---DDLLELLHDPDWTVRLAAVEHA-------S-----------L 220 (244)
T ss_dssp GSTTCSSHHHHHHHHHHC-----------C----G---GGGGGGGGCSSHHHHHHHHHHS-------C-----------H
T ss_pred HHHcCCCHHHHHHHHHhC-----------C----H---HHHHHHHcCCCHHHHHHHHHcC-------C-----------H
Confidence 456889999999987652 1 1 2355668999999998777653 3 1
Q ss_pred HHHHHhCCCcHHHHHHHHHHH
Q 000156 940 DILKCLGDNKKHMRECTLTVL 960 (2015)
Q Consensus 940 ~ll~~L~D~k~~Vr~aa~~aL 960 (2015)
..+..|.|....||.++...|
T Consensus 221 ~~L~~L~D~~~~VR~aa~~~L 241 (244)
T 1lrv_A 221 EALRELDEPDPEVRLAIAGRL 241 (244)
T ss_dssp HHHHHCCCCCHHHHHHHHCCC
T ss_pred HHHHHccCCCHHHHHHHHHHh
Confidence 344556999999999987654
No 117
>3o2t_A Symplekin; heat repeat, scaffold, protein binding; 1.40A {Homo sapiens} PDB: 3odr_A 3ods_A 4h3k_A* 3o2s_A 3o2q_A* 4h3h_A*
Probab=88.74 E-value=12 Score=45.74 Aligned_cols=141 Identities=8% Similarity=0.092 Sum_probs=101.4
Q ss_pred HHHHHHHHHHHHHHHhccccCCCCChhhHHHHHHhccccchHHHHHHHHHHHHHHHHHhChhhHHhhhHHHHHHHHHhCC
Q 000156 868 KVRLESIEAVNKILEEANKRIQPAGTGELFGGLRGRLYDSNKNLVMATLITLGAVASAMGPAVEKSSKGVLSDILKCLGD 947 (2015)
Q Consensus 868 k~R~eale~L~~ll~~a~~~I~~~~~~eL~~~L~~rL~DsN~~V~~~Al~~l~~La~alg~~f~~~~~~llp~ll~~L~D 947 (2015)
.+|.+.|..+++++-.. .|+.+.++++.+...-.|.+..|+.....+|++.+.. + ..++..+++.+...|.|
T Consensus 40 ~~Kl~~L~q~~EL~l~~----dpsLl~~fl~~il~f~~d~~~~vRk~~a~FieEa~~~---~-~el~~~~l~~L~~LL~d 111 (386)
T 3o2t_A 40 DSKITVLKQVQELIINK----DPTLLDNFLDEIIAFQADKSIEVRKFVIGFIEEACKR---D-IELLLKLIANLNMLLRD 111 (386)
T ss_dssp THHHHHHHHHHHHHHTT----CGGGGGGGHHHHHGGGGCSCHHHHHHHHHHHHHHHHH---C-GGGHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHhcc----CHHHHHHHHHHHHHhccCCcHHHHHHHHHHHHHHHHH---H-HHHHHHHHHHHHHHHcC
Confidence 47999999999987532 4556788999999988999999999999999888753 2 34567788888889999
Q ss_pred CcHHHHHHHHHHHHHHHHhcCchhhHHHHHHHHh-cCCCChhHHHHHHHHHHHHhccCCCCCChhhhHHHHHhhcCCCCh
Q 000156 948 NKKHMRECTLTVLDAWLAAVHLDKMVPYVTTALT-DAKLGAEGRKDLFDWLSKQLTGLSGFPDAAHLLKPASIAMTDKSS 1026 (2015)
Q Consensus 948 ~k~~Vr~aa~~aL~~i~~~~gl~~ll~~l~~~L~-~~k~~p~~R~~~l~~L~~~l~~~~~~~~~~~ll~pl~~~L~D~~~ 1026 (2015)
..+.|...++.|...++. .+...+. ++. ....-..+|.|+... +. -|+..+...+.
T Consensus 112 ~d~~V~K~~I~~~tslYp---------l~f~~i~~~~~-~~~~~e~~W~~m~~l----------K~---~Il~~~ds~n~ 168 (386)
T 3o2t_A 112 ENVNVVKKAILTMTQLYK---------VALQWMVKSRV-ISELQEACWDMVSAM----------AG---DIILLLDSDND 168 (386)
T ss_dssp SSHHHHHHHHHHHHHHHH---------HHHHHHHHC-C-CCHHHHHHHHHHHHH----------HH---HHHHGGGCSSH
T ss_pred CCHHHHHHHHHHHHHHHH---------HHHHHHhcCCC-cchhHHHHHHHHHHH----------HH---HHHHHhccCCc
Confidence 999999998888877653 3333332 321 123346778777642 11 24445677888
Q ss_pred HHHHHHHHHHHHH
Q 000156 1027 DVRKAAEACIVEI 1039 (2015)
Q Consensus 1027 ~VR~aA~~~L~~l 1039 (2015)
.||-.+.+.+..+
T Consensus 169 GVrl~aiKFle~V 181 (386)
T 3o2t_A 169 GIRTHAIKFVEGL 181 (386)
T ss_dssp HHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHH
Confidence 9998888776554
No 118
>1juq_A ADP-ribosylation factor binding protein GGA3; protein-peptide compelx, VHS domain, DXXLL sorting signal, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.9.2 PDB: 1jpl_A 1lf8_A*
Probab=88.12 E-value=0.84 Score=49.58 Aligned_cols=77 Identities=12% Similarity=0.179 Sum_probs=63.7
Q ss_pred hhhhHHHHHHHHhhcCChhhHHHHHHHHHHHHHHhCCC---CcChhHHHhhhhhhhc------CCChhHHHHHHHHHHHH
Q 000156 125 AVDVFLDVMEKAIKNKVAKAVVPAIDVMFQALSEFGAK---IIPPKRILKMLPELFD------HQDQNVRASSKGLTLEL 195 (2015)
Q Consensus 125 ~~~~v~~~L~~~~~~KnpKv~~~~l~~L~~~l~~fG~~---~i~~k~il~~l~~ll~------~~d~~VR~~a~~l~~el 195 (2015)
++..++..|.+.+.|+||+++.-+|..|-.++++=|.. .|.=+.|+..|.+++. ..+..||+.+..++.+-
T Consensus 47 ~~k~A~ral~krl~~~n~~vql~AL~LLd~~vkNCG~~Fh~evas~~Fl~eL~kl~~~k~~~~~~~~~Vk~kil~li~~W 126 (171)
T 1juq_A 47 GPQIAVRLLAHKIQSPQEWEALQALTVLEACMKNCGRRFHNEVGKFRFLNELIKVVSPKYLGDRVSEKVKTKVIELLYSW 126 (171)
T ss_dssp HHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHSHHHHHHHHTSHHHHHHHHHHHCCCCCCTTSCHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHcCHHHHHHHhhHHHHHHHHHHhccccCCCCCCHHHHHHHHHHHHHH
Confidence 46678888999999999999999999999999986652 2344789999999986 35789999999998887
Q ss_pred HHHhCC
Q 000156 196 CRWIGK 201 (2015)
Q Consensus 196 y~~lG~ 201 (2015)
+...+.
T Consensus 127 ~~~f~~ 132 (171)
T 1juq_A 127 TMALPE 132 (171)
T ss_dssp HHHCTT
T ss_pred HHHcCC
Confidence 777654
No 119
>1mhq_A ADP-ribosylation factor binding protein GGA2; super helix, protein transport; 2.20A {Homo sapiens} SCOP: a.118.9.2
Probab=86.74 E-value=1.9 Score=45.61 Aligned_cols=77 Identities=14% Similarity=0.220 Sum_probs=63.4
Q ss_pred hhhhHHHHHHHHhhcCChhhHHHHHHHHHHHHHHhCCCC---cChhHHHhhhhhhhcC------CChhHHHHHHHHHHHH
Q 000156 125 AVDVFLDVMEKAIKNKVAKAVVPAIDVMFQALSEFGAKI---IPPKRILKMLPELFDH------QDQNVRASSKGLTLEL 195 (2015)
Q Consensus 125 ~~~~v~~~L~~~~~~KnpKv~~~~l~~L~~~l~~fG~~~---i~~k~il~~l~~ll~~------~d~~VR~~a~~l~~el 195 (2015)
++..++..|.+.+.|+||+++.-||..|-.++++=|... |.=+.|+..|.+++.. .+..||+....++.+-
T Consensus 35 ~~k~a~rai~krl~~~n~~vql~AL~LLe~~vkNCG~~fh~evas~~Fl~eL~kl~~~k~~~~~~~~~Vk~kil~li~~W 114 (148)
T 1mhq_A 35 GPTHAPWLLAHKIQSPQEKEALYALTVLEMCMNHCGEKFHSEVAKFRFLNELIKVLSPKYLGSWATGKVKGRVIEILFSW 114 (148)
T ss_dssp HHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHSCHHHHHHHTSHHHHHHHHHTTCCSTTSCCCCHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHcCHHHHHHHhhHHHHHHHHHHHccccCCCCCCHHHHHHHHHHHHHH
Confidence 467788888999999999999999999999999988632 3447899999999874 5889999998888777
Q ss_pred HHHhCC
Q 000156 196 CRWIGK 201 (2015)
Q Consensus 196 y~~lG~ 201 (2015)
+...+.
T Consensus 115 ~~~f~~ 120 (148)
T 1mhq_A 115 TVWFPE 120 (148)
T ss_dssp HHHCTT
T ss_pred HHHcCC
Confidence 666543
No 120
>1x5b_A Signal transducing adaptor molecule 2; VHS domain, ubiquitin binding, STAM2, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2l0t_B
Probab=86.65 E-value=4.5 Score=43.48 Aligned_cols=81 Identities=19% Similarity=0.299 Sum_probs=60.7
Q ss_pred CChHhHHHHHHHHhhcCChHHHHHHHHHHHHHHHhcChhHHHHh-hhhHHHHHHHHhcC-CCHHHHHHHHHHHHHHHHHh
Q 000156 399 LNLVDVVEDVKTSVKNKVPLVRSLTLNWVTFCIETSSKAAVLKV-HKDYVPICMECLND-GTPEVRDAAFSVLAAIAKSV 476 (2015)
Q Consensus 399 ~~l~~il~~l~~~L~~Knp~vR~~~l~~L~~~l~~~~~~~l~~~-l~~l~p~l~k~L~D-s~~~VR~aA~~al~~l~~~~ 476 (2015)
.+..+.+..|..-++++||.+...+|..|..|+.+|+...-... -+.++..+++.+.. .++.||+...+.+......+
T Consensus 48 ~~~keA~ral~krl~~~n~~vql~AL~LLd~~vkNcG~~Fh~evas~~Fl~el~~l~~~~~~~~Vk~kil~li~~W~~~f 127 (163)
T 1x5b_A 48 NGAKDCLKAIMKRVNHKVPHVALQALTLLGACVANCGKIFHLEVCSRDFATEVRAVIKNKAHPKVCEKLKSLMVEWSEEF 127 (163)
T ss_dssp SHHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHTCHHHHHHHTSHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHT
T ss_pred ccHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhHHHHHHHhhHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHh
Confidence 34455666666778899999999999999999999986532111 14555666666654 77899999999999888888
Q ss_pred Cch
Q 000156 477 GMR 479 (2015)
Q Consensus 477 Ge~ 479 (2015)
+..
T Consensus 128 ~~~ 130 (163)
T 1x5b_A 128 QKD 130 (163)
T ss_dssp TTC
T ss_pred cCC
Confidence 754
No 121
>1dvp_A HRS, hepatocyte growth factor-regulated tyrosine kinase substrate; VHS, FYVE, zinc finger, superhelix, transferase; HET: CIT; 2.00A {Drosophila melanogaster} SCOP: a.118.9.2 g.50.1.1
Probab=86.03 E-value=2.8 Score=47.47 Aligned_cols=98 Identities=16% Similarity=0.324 Sum_probs=72.0
Q ss_pred cCCCChHHHHHHHHHHHHHHHhccccCCCCChhhHHHHHHhccccchHHHHHHHHHHHHHHHHHhChhhHHh--hhHHHH
Q 000156 862 LESPDWKVRLESIEAVNKILEEANKRIQPAGTGELFGGLRGRLYDSNKNLVMATLITLGAVASAMGPAVEKS--SKGVLS 939 (2015)
Q Consensus 862 l~d~~Wk~R~eale~L~~ll~~a~~~I~~~~~~eL~~~L~~rL~DsN~~V~~~Al~~l~~La~alg~~f~~~--~~~llp 939 (2015)
+.+.||.. +-.|-+++.. .+..-.+.+.+|+++|+..|.+++..||.++..+++..|..|... .+.|+.
T Consensus 18 ~~~~dw~~----~leicd~i~~-----~~~~~k~a~r~l~krl~~~n~~~~l~aL~Lle~~vkNcG~~f~~eva~~~fl~ 88 (220)
T 1dvp_A 18 RLEPDWPS----ILLICDEINQ-----KDVTPKNAFAAIKKKMNSPNPHSSCYSLLVLESIVKNCGAPVHEEVFTKENCE 88 (220)
T ss_dssp CSSCCHHH----HHHHHHHHHT-----TSSCHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHSHHHHHHHHSSHHHHH
T ss_pred CCCcCHHH----HHHHHHhhcC-----CCcCHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhccCHHHHHHHHhHHHHH
Confidence 34568964 3345555542 122347899999999999999999999999999999999998643 233555
Q ss_pred HHHHHhCC-CcHHHHHHHHHHHHHHHHhcC
Q 000156 940 DILKCLGD-NKKHMRECTLTVLDAWLAAVH 968 (2015)
Q Consensus 940 ~ll~~L~D-~k~~Vr~aa~~aL~~i~~~~g 968 (2015)
.+...+++ ....|++.+.+.+..|.....
T Consensus 89 ~l~~l~~~~~~~~Vk~kil~li~~W~~~f~ 118 (220)
T 1dvp_A 89 MFSSFLESTPHENVRQKMLELVQTWAYAFR 118 (220)
T ss_dssp HHHHHHHHCSCHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHhcCCCcHHHHHHHHHHHHHHHHHhc
Confidence 55555543 456789999899999987764
No 122
>3ldz_A STAM-1, signal transducing adapter molecule 1; ubiquitin-binding, cytoplasm, UBL conjugation, endosome, membrane, protein transport, SH3 domain; 2.60A {Homo sapiens} SCOP: a.118.9.0
Probab=85.61 E-value=5 Score=41.96 Aligned_cols=96 Identities=15% Similarity=0.222 Sum_probs=72.0
Q ss_pred hccCChHHHHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHhhhcchhhh--HhHHHHH
Q 000156 294 VKATKWSERKDAVAELTKLASTKRIAPGDFTEVCRTLKKLITDVNIAVAVEAIQAIGNLARGLRTHFSGSS--RFLLPVL 371 (2015)
Q Consensus 294 l~s~kWkeR~eaL~~L~~l~~~~ki~~~~y~~l~~~L~k~l~D~N~~V~~~A~~~l~~La~~L~~~f~~~~--~~llp~L 371 (2015)
+.+.+|.- +.++..+++.. +..-.+.+++|+++|+..|+.+...|+.+++.+.+..|..|...+ +.++..|
T Consensus 18 l~~~dw~~----ileicD~I~~~---~~~~k~a~rai~Krl~~~n~~~ql~AL~LLe~~vkNcG~~f~~evas~~Fl~el 90 (140)
T 3ldz_A 18 NTAEDWGL----ILDICDKVGQS---RTGPKDCLRSIMRRVNHKDPHVAMQALTLLGACVSNCGKIFHLEVCSRDFASEV 90 (140)
T ss_dssp SSSCCHHH----HHHHHHHHTTS---TTHHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHSCHHHHHHHSSHHHHHHH
T ss_pred CCCcCHHH----HHHHHHHHHCC---CcCHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHhcCHHHHHHHhhHHHHHHH
Confidence 56788854 44455555421 223468899999999999999999999999999999999987543 5666666
Q ss_pred HHHhccCcHHHHHHHHHHHHHHHHh
Q 000156 372 LEKLKEKKPTVAESLTQTLQAMHKA 396 (2015)
Q Consensus 372 L~klkdkk~~V~~aa~~aL~al~~~ 396 (2015)
...++...+.|++-+.+.+..|...
T Consensus 91 ~~l~~~~~~~Vk~kil~li~~W~~~ 115 (140)
T 3ldz_A 91 SNVLNKGHPKVCEKLKALMVEWTDE 115 (140)
T ss_dssp HHHHHHSCHHHHHHHHHHHHHHHHH
T ss_pred HHHhccCCHHHHHHHHHHHHHHHHH
Confidence 6666556778888888888888754
No 123
>3tt9_A Plakophilin-2; cell adhesion; 1.55A {Homo sapiens}
Probab=84.24 E-value=7.4 Score=44.36 Aligned_cols=145 Identities=10% Similarity=-0.006 Sum_probs=94.8
Q ss_pred HHHHHHHhc--ccCHHHHHHHHHHHHHHHHHhhhcch-hhhHhHHHHHHHHhccCcHHHHHHHHHHHHHHHHhcC---CC
Q 000156 327 CRTLKKLIT--DVNIAVAVEAIQAIGNLARGLRTHFS-GSSRFLLPVLLEKLKEKKPTVAESLTQTLQAMHKAGC---LN 400 (2015)
Q Consensus 327 ~~~L~k~l~--D~N~~V~~~A~~~l~~La~~L~~~f~-~~~~~llp~LL~klkdkk~~V~~aa~~aL~al~~~~~---~~ 400 (2015)
++.|.+.+. |....+...|+.+|..|+.+-...-. -.-...+|.|+..|+.....+++.+..||..+...+. ..
T Consensus 10 i~~lV~lL~s~~~~~~~q~~Aa~~l~~L~~~~~~~r~~I~~~G~Ip~LV~lL~s~~~~vq~~Aa~aL~nLa~~~~~nk~~ 89 (233)
T 3tt9_A 10 LERAVSMLEADHMLPSRISAAATFIQHECFQKSEARKRVNQLRGILKLLQLLKVQNEDVQRAVCGALRNLVFEDNDNKLE 89 (233)
T ss_dssp HHHHHHTCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHTTHHHHHHHGGGCCCHHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHhCCCCchHHHHHHHHHHHHHHHcCCcHHHHHHHHcCCHHHHHHHHcCCCHHHHHHHHHHHHHHHhCCHHHHHH
Confidence 344555666 44337888888899988865322111 1123568999999999999999999999999975200 00
Q ss_pred h--HhHHHHHHHHhh-cCChHHHHHHHHHHHHHHHhcC-hhHHHHhhhhHHHHHHHHh-------cC---------CCHH
Q 000156 401 L--VDVVEDVKTSVK-NKVPLVRSLTLNWVTFCIETSS-KAAVLKVHKDYVPICMECL-------ND---------GTPE 460 (2015)
Q Consensus 401 l--~~il~~l~~~L~-~Knp~vR~~~l~~L~~~l~~~~-~~~l~~~l~~l~p~l~k~L-------~D---------s~~~ 460 (2015)
+ ..-+|.|+..|. +.++.+++.+...|..+-.... +..+ .+.-+|.|+..+ .| .+++
T Consensus 90 I~~~GaI~~Lv~lL~~~~~~~~~e~a~~aL~nLS~~~~~k~~i---~~~~i~~Lv~ll~~p~sG~~~~~~~~~~~~~~~~ 166 (233)
T 3tt9_A 90 VAELNGVPRLLQVLKQTRDLETKKQITGLLWNLSSNDKLKNLM---ITEALLTLTENIIIPFSGWPEGDYPKANGLLDFD 166 (233)
T ss_dssp HHHTTHHHHHHHHHHHCCCHHHHHHHHHHHHHHHTSGGGHHHH---HHHHHHHHCCCCCHHHHCCCGGGCCCCCTTCCHH
T ss_pred HHHcCCHHHHHHHHccCCCHHHHHHHHHHHHHHHcChhhHHHH---HhccHHHHHHHHhccccCCcccccccccccchHH
Confidence 1 124677888887 5789999998877766532211 2222 234566666543 12 3679
Q ss_pred HHHHHHHHHHHHHH
Q 000156 461 VRDAAFSVLAAIAK 474 (2015)
Q Consensus 461 VR~aA~~al~~l~~ 474 (2015)
|+..|..||..+..
T Consensus 167 v~~na~~~L~nLss 180 (233)
T 3tt9_A 167 IFYNVTGCLRNMSS 180 (233)
T ss_dssp HHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHhc
Confidence 99999999987754
No 124
>3rru_A TOM1L1 protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, super-helical protein; 3.00A {Homo sapiens}
Probab=84.23 E-value=3.5 Score=43.76 Aligned_cols=99 Identities=16% Similarity=0.338 Sum_probs=73.0
Q ss_pred cCCCChHHHHHHHHHHHHHHHhccccCCCCChhhHHHHHHhcccc-chHHHHHHHHHHHHHHHHHhChhhHHhh--hHHH
Q 000156 862 LESPDWKVRLESIEAVNKILEEANKRIQPAGTGELFGGLRGRLYD-SNKNLVMATLITLGAVASAMGPAVEKSS--KGVL 938 (2015)
Q Consensus 862 l~d~~Wk~R~eale~L~~ll~~a~~~I~~~~~~eL~~~L~~rL~D-sN~~V~~~Al~~l~~La~alg~~f~~~~--~~ll 938 (2015)
+.+.+|. .+-.|..++.. . +..-.+.+.+|++||.. .|.+++..||.++..+++.+|..|...+ +.|+
T Consensus 29 l~~~Dw~----~ileicD~In~--~---~~~pkeA~ral~KRl~~~~n~~~~l~AL~LLe~cvkNCG~~fh~eiask~Fl 99 (152)
T 3rru_A 29 VQTEDWG----QFMHICDIINT--T---QDGPKDAVKALKKRISKNYNHKEIQLTLSLIDMCVQNCGPSFQSLIVKKEFV 99 (152)
T ss_dssp CCSCCHH----HHHHHHHHHHH--S---TTHHHHHHHHHHHHHTTCCBHHHHHHHHHHHHHHHHHSCHHHHHHHSSHHHH
T ss_pred CCCccHH----HHHHHHHHHhC--C---CccHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHhcCHHHHHHHHhhHhH
Confidence 3456895 45556666653 1 22247899999999985 5899999999999999999999997643 4566
Q ss_pred HH-HHHHhCCC---cHHHHHHHHHHHHHHHHhcCc
Q 000156 939 SD-ILKCLGDN---KKHMRECTLTVLDAWLAAVHL 969 (2015)
Q Consensus 939 p~-ll~~L~D~---k~~Vr~aa~~aL~~i~~~~gl 969 (2015)
.. +.+.+.++ ...|++.+...+..|....+-
T Consensus 100 ~e~L~kl~~~~~~~~~~Vk~kil~li~~Wa~~F~~ 134 (152)
T 3rru_A 100 KENLVKLLNPRYNLPLDIQNRILNFIKTWSQGFPG 134 (152)
T ss_dssp TTTTGGGGSGGGCCCHHHHHHHHHHHHHHHTCCSS
T ss_pred HHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHHhCC
Confidence 54 55555543 346999999999999987753
No 125
>3tt9_A Plakophilin-2; cell adhesion; 1.55A {Homo sapiens}
Probab=80.80 E-value=6.2 Score=45.02 Aligned_cols=110 Identities=11% Similarity=0.049 Sum_probs=78.1
Q ss_pred hHhHHHHHHHHhccCcH--HHHHHHHHHHHHHHHhcC-----CChHhHHHHHHHHhhcCChHHHHHHHHHHHHHHHhcCh
Q 000156 364 SRFLLPVLLEKLKEKKP--TVAESLTQTLQAMHKAGC-----LNLVDVVEDVKTSVKNKVPLVRSLTLNWVTFCIETSSK 436 (2015)
Q Consensus 364 ~~~llp~LL~klkdkk~--~V~~aa~~aL~al~~~~~-----~~l~~il~~l~~~L~~Knp~vR~~~l~~L~~~l~~~~~ 436 (2015)
+...+|.+.+.+..... .++..+..++..+...+. +--...+|.+...|++.++.++..++..|..+....+.
T Consensus 6 ~~~~i~~lV~lL~s~~~~~~~q~~Aa~~l~~L~~~~~~~r~~I~~~G~Ip~LV~lL~s~~~~vq~~Aa~aL~nLa~~~~~ 85 (233)
T 3tt9_A 6 MEMTLERAVSMLEADHMLPSRISAAATFIQHECFQKSEARKRVNQLRGILKLLQLLKVQNEDVQRAVCGALRNLVFEDND 85 (233)
T ss_dssp CCCCHHHHHHTCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHTTHHHHHHHGGGCCCHHHHHHHHHHHHHHHTTCHH
T ss_pred hhccHHHHHHHhCCCCchHHHHHHHHHHHHHHHcCCcHHHHHHHHcCCHHHHHHHHcCCCHHHHHHHHHHHHHHHhCCHH
Confidence 34568888888877666 777667678877764410 00113468889999999999999999998876443221
Q ss_pred --hHHHHhhhhHHHHHHHHhc-CCCHHHHHHHHHHHHHHHHH
Q 000156 437 --AAVLKVHKDYVPICMECLN-DGTPEVRDAAFSVLAAIAKS 475 (2015)
Q Consensus 437 --~~l~~~l~~l~p~l~k~L~-Ds~~~VR~aA~~al~~l~~~ 475 (2015)
..+.. .--+|.|+++|. ..+.++|+.|..+||.+..+
T Consensus 86 nk~~I~~--~GaI~~Lv~lL~~~~~~~~~e~a~~aL~nLS~~ 125 (233)
T 3tt9_A 86 NKLEVAE--LNGVPRLLQVLKQTRDLETKKQITGLLWNLSSN 125 (233)
T ss_dssp HHHHHHH--TTHHHHHHHHHHHCCCHHHHHHHHHHHHHHHTS
T ss_pred HHHHHHH--cCCHHHHHHHHccCCCHHHHHHHHHHHHHHHcC
Confidence 11211 236889999997 47899999999999988643
No 126
>3u0r_A Apoptosis inhibitor 5; heat repeat, armadillo repeat, lysine acetylation; 2.50A {Homo sapiens} PDB: 3v6a_A
Probab=79.04 E-value=10 Score=47.16 Aligned_cols=128 Identities=14% Similarity=0.185 Sum_probs=94.3
Q ss_pred HHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHhhhcchhhhHhHHHHHHHHhccCcHHHHHHHHHHHHHHHHhcCCChHh
Q 000156 324 TEVCRTLKKLITDVNIAVAVEAIQAIGNLARGLRTHFSGSSRFLLPVLLEKLKEKKPTVAESLTQTLQAMHKAGCLNLVD 403 (2015)
Q Consensus 324 ~~l~~~L~k~l~D~N~~V~~~A~~~l~~La~~L~~~f~~~~~~llp~LL~klkdkk~~V~~aa~~aL~al~~~~~~~l~~ 403 (2015)
.+.+.++..++.|..+.|+..|++-|-.+|+. .++..+.-.|...|....+.-.+.+..+|..++.. ....
T Consensus 64 ~~Ai~a~lDLcEDed~~IR~qaik~Lp~~ck~------~~i~kiaDvL~QlLqtdd~~E~~~V~~sL~sllk~---Dpk~ 134 (507)
T 3u0r_A 64 DSAINAQLDLCEDEDVSIRRQAIKELPQFATG------ENLPRVADILTQLLQTDDSAEFNLVNNALLSIFKM---DAKG 134 (507)
T ss_dssp HHHHHHHHHHHTCSSHHHHHHHHHHGGGGCCT------TCHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHH---CHHH
T ss_pred HHHHHHHHHHHhcccHHHHHHHHHhhHHHhhh------hhhhhHHHHHHHHHhccchHHHHHHHHHHHHHHhc---ChHH
Confidence 45677888888999999999999999888866 34666777777777777888899999999999985 3344
Q ss_pred HHHHHHHHhhcCChHHHHHHHHHHHHHHHhcChhHHHHhh-hhHHHHHHHHhcCCCHH
Q 000156 404 VVEDVKTSVKNKVPLVRSLTLNWVTFCIETSSKAAVLKVH-KDYVPICMECLNDGTPE 460 (2015)
Q Consensus 404 il~~l~~~L~~Knp~vR~~~l~~L~~~l~~~~~~~l~~~l-~~l~p~l~k~L~Ds~~~ 460 (2015)
.+..++..+.+....+|..++.||..-+...++..+.+-+ .-++..+.+.|.|-..+
T Consensus 135 tl~~lf~~i~~~~e~~Rer~lkFi~~kl~~l~~~~l~~E~E~~i~~~ikK~L~DVT~~ 192 (507)
T 3u0r_A 135 TLGGLFSQILQGEDIVRERAIKFLSTKLKTLPDEVLTKEVEELILTESKKVLEDVTGE 192 (507)
T ss_dssp HHHHHHHHHHHSCHHHHHHHHHHHHHHGGGSCTTTSCHHHHHHHHHHHHHHTTSCCHH
T ss_pred HHHHHHHHHcccchHHHHHHHHHHHHHHhhcchhhccHHHHHHHHHHHHHHhccccHH
Confidence 4555554444457899999999999888766654443222 34666777888776553
No 127
>1upk_A MO25 protein; transferase, armadillo; HET: MSE; 1.85A {Homo sapiens} SCOP: a.118.1.15 PDB: 1upl_A 2wtk_A* 3gni_A*
Probab=76.47 E-value=84 Score=37.39 Aligned_cols=178 Identities=10% Similarity=0.127 Sum_probs=114.9
Q ss_pred hhhhhccCChHHHHHHHHHHHHHhc---CCCCCCCCh----HHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHhhhcchh
Q 000156 290 FWEGVKATKWSERKDAVAELTKLAS---TKRIAPGDF----TEVCRTLKKLITDVNIAVAVEAIQAIGNLARGLRTHFSG 362 (2015)
Q Consensus 290 f~~~l~s~kWkeR~eaL~~L~~l~~---~~ki~~~~y----~~l~~~L~k~l~D~N~~V~~~A~~~l~~La~~L~~~f~~ 362 (2015)
+...+..-+|..|+++..-+..++. +.+....+| .+++..|.+.-.+..+.+-.. ..|.++++ ++.
T Consensus 83 Li~~l~~L~fE~RKd~~~if~~llr~~~~~~~p~v~Yl~~~peil~~L~~gYe~~diAl~~G--~mLRecir-----~e~ 155 (341)
T 1upk_A 83 LVADLQLIDFEGKKDVAQIFNNILRRQIGTRTPTVEYICTQQNILFMLLKGYESPEIALNCG--IMLRECIR-----HEP 155 (341)
T ss_dssp HHHTGGGSCHHHHHHHHHHHHHHHTCCBTTBCHHHHHHHTCTHHHHHHHHGGGSTTTHHHHH--HHHHHHHT-----SHH
T ss_pred HHHhcccCCchhhccHHHHHHHHHhcccCCCCchhHHHHcCHHHHHHHHHhhccchhHhHHH--HHHHHHHH-----hHH
Confidence 4445677889999999988887764 122111122 577888887777665433222 22222221 122
Q ss_pred hhHhH-----HHHHHHHhccCcHHHHHHHHHHHHHHHHhc--------CCChHhHHHHHHHHhhcCChHHHHHHHHHHHH
Q 000156 363 SSRFL-----LPVLLEKLKEKKPTVAESLTQTLQAMHKAG--------CLNLVDVVEDVKTSVKNKVPLVRSLTLNWVTF 429 (2015)
Q Consensus 363 ~~~~l-----lp~LL~klkdkk~~V~~aa~~aL~al~~~~--------~~~l~~il~~l~~~L~~Knp~vR~~~l~~L~~ 429 (2015)
.++.+ +-.+++-....+=.|...|..++..++... ....+.++..+..-+.+.|.-+|++++.+|+.
T Consensus 156 la~~iL~~~~f~~fF~yv~~~~FdiasDAf~TfkelLt~Hk~lvaefL~~nyd~Ff~~y~~Ll~S~NYVTkRQSlKLLge 235 (341)
T 1upk_A 156 LAKIILWSEQFYDFFRYVEMSTFDIASDAFATFKDLLTRHKLLSAEFLEQHYDRFFSEYEKLLHSENYVTKRQSLKLLGE 235 (341)
T ss_dssp HHHHHHHSGGGGHHHHHTTCSSHHHHHHHHHHHHHHHHSSHHHHHHHHHHTHHHHHHHHHHHTTCSSHHHHHHHHHHHHH
T ss_pred HHHHHhccHHHHHHHHHhcCCCchHHHHHHHHHHHHHhccHHHHHHHHHHhHHHHHHHHHHHhcCCcchhHHHHHHHHHH
Confidence 22211 224445555566667777777777665430 12456777888888899999999999999999
Q ss_pred HHHh-cChhHHHHhh--hhHHHHHHHHhcCCCHHHHHHHHHHHHHHHH
Q 000156 430 CIET-SSKAAVLKVH--KDYVPICMECLNDGTPEVRDAAFSVLAAIAK 474 (2015)
Q Consensus 430 ~l~~-~~~~~l~~~l--~~l~p~l~k~L~Ds~~~VR~aA~~al~~l~~ 474 (2015)
++.. +......+++ +.-+..++.+|.|..+.++-.|+-.+-.|..
T Consensus 236 lLldr~N~~vM~~Yis~~~nLkl~M~LL~d~sk~Iq~EAFhVFKvFVA 283 (341)
T 1upk_A 236 LLLDRHNFTIMTKYISKPENLKLMMNLLRDKSRNIQFEAFHVFKVFVA 283 (341)
T ss_dssp HHHSGGGHHHHHHHTTCHHHHHHHHHHTTCSCHHHHHHHHHHHHHHHH
T ss_pred HHhCchHHHHHHHHhCCHHHHHHHHHHhcCchhchhhhhhhheeeeee
Confidence 8764 2333344544 5567889999999999999999988876653
No 128
>3u0r_A Apoptosis inhibitor 5; heat repeat, armadillo repeat, lysine acetylation; 2.50A {Homo sapiens} PDB: 3v6a_A
Probab=75.27 E-value=16 Score=45.46 Aligned_cols=147 Identities=11% Similarity=0.057 Sum_probs=102.9
Q ss_pred ChHHHHHHHHHHHHHHHhccccCCCCChhhHHHHHHhccccchHHHHHHHHHHHHHHHHHhChhhHHhhhHHHHHHHHHh
Q 000156 866 DWKVRLESIEAVNKILEEANKRIQPAGTGELFGGLRGRLYDSNKNLVMATLITLGAVASAMGPAVEKSSKGVLSDILKCL 945 (2015)
Q Consensus 866 ~Wk~R~eale~L~~ll~~a~~~I~~~~~~eL~~~L~~rL~DsN~~V~~~Al~~l~~La~alg~~f~~~~~~llp~ll~~L 945 (2015)
+-+++.-|.+-|..... --|..-.+-+.++.....|....|+.+|++-|..+|+. .++..+.-.|.+.|
T Consensus 41 ~~k~K~LaaQ~I~kffk-----~FP~l~~~Ai~a~lDLcEDed~~IR~qaik~Lp~~ck~------~~i~kiaDvL~QlL 109 (507)
T 3u0r_A 41 GTKEKRLAAQFIPKFFK-----HFPELADSAINAQLDLCEDEDVSIRRQAIKELPQFATG------ENLPRVADILTQLL 109 (507)
T ss_dssp CHHHHHHHHHHHHHHGG-----GCGGGHHHHHHHHHHHHTCSSHHHHHHHHHHGGGGCCT------TCHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHHHh-----hChhhHHHHHHHHHHHHhcccHHHHHHHHHhhHHHhhh------hhhhhHHHHHHHHH
Confidence 34555555555554432 12333356788899999999999999999999888855 45677778888899
Q ss_pred CCCcHHHHHHHHHHHHHHHHhcCchhhHHHHHHHHhcCCCChhHHHHHHHHHHHHhccCCCC---CChhhhHHH-HHhhc
Q 000156 946 GDNKKHMRECTLTVLDAWLAAVHLDKMVPYVTTALTDAKLGAEGRKDLFDWLSKQLTGLSGF---PDAAHLLKP-ASIAM 1021 (2015)
Q Consensus 946 ~D~k~~Vr~aa~~aL~~i~~~~gl~~ll~~l~~~L~~~k~~p~~R~~~l~~L~~~l~~~~~~---~~~~~ll~p-l~~~L 1021 (2015)
.-..+.-+.++.++|..++..-.- ..+..+...+.+. ...+|..++.||...+-.++.. .+...++.. +.+.|
T Consensus 110 qtdd~~E~~~V~~sL~sllk~Dpk-~tl~~lf~~i~~~--~e~~Rer~lkFi~~kl~~l~~~~l~~E~E~~i~~~ikK~L 186 (507)
T 3u0r_A 110 QTDDSAEFNLVNNALLSIFKMDAK-GTLGGLFSQILQG--EDIVRERAIKFLSTKLKTLPDEVLTKEVEELILTESKKVL 186 (507)
T ss_dssp TCCCHHHHHHHHHHHHHHHHHCHH-HHHHHHHHHHHHS--CHHHHHHHHHHHHHHGGGSCTTTSCHHHHHHHHHHHHHHT
T ss_pred hccchHHHHHHHHHHHHHHhcChH-HHHHHHHHHHccc--chHHHHHHHHHHHHHHhhcchhhccHHHHHHHHHHHHHHh
Confidence 988889999999999998876542 2233333333322 3688999999999999877652 344555544 77788
Q ss_pred CCCCh
Q 000156 1022 TDKSS 1026 (2015)
Q Consensus 1022 ~D~~~ 1026 (2015)
.|-.+
T Consensus 187 ~DVT~ 191 (507)
T 3u0r_A 187 EDVTG 191 (507)
T ss_dssp TSCCH
T ss_pred ccccH
Confidence 77665
No 129
>3gjx_A Exportin-1; transport, cytoplasm, nucleus, RNA-binding, acetylation, GTP-binding, HOST-virus interaction, nucleotide-binding, phosphoprotein; HET: GTP; 2.50A {Mus musculus} PDB: 3nby_A* 3nbz_A* 3nc0_A* 3nc1_A* 3gb8_A
Probab=74.98 E-value=2.7e+02 Score=38.66 Aligned_cols=170 Identities=9% Similarity=0.079 Sum_probs=93.9
Q ss_pred ChHHHHHHHHHHHHHhcC--CCCCCCChHHHH----HHHHHHhcc-----cCHHHHHHHHHHHHHHHHHhhhcchhhhHh
Q 000156 298 KWSERKDAVAELTKLAST--KRIAPGDFTEVC----RTLKKLITD-----VNIAVAVEAIQAIGNLARGLRTHFSGSSRF 366 (2015)
Q Consensus 298 kWkeR~eaL~~L~~l~~~--~ki~~~~y~~l~----~~L~k~l~D-----~N~~V~~~A~~~l~~La~~L~~~f~~~~~~ 366 (2015)
+=..|-=|+..|+..++. ..+...+...|- ..+.+...+ .+..+...-+.++..+++.. |-..+..
T Consensus 74 ~~~vR~fAa~~L~~~I~~~W~~L~~e~~~~LR~~Ll~~l~~~~~~~~~~e~~~~vinKLa~~La~I~k~~---~P~~Wp~ 150 (1073)
T 3gjx_A 74 NMNTKYYGLQILENVIKTRWKILPRNQCEGIKKYVVGLIIKTSSDPTCVEKEKVYIGKLNMILVQILKQE---WPKHWPT 150 (1073)
T ss_dssp SHHHHHHHHHHHHHHHHHTGGGSCHHHHHHHHHHHHHHHHHHHTCGGGGTSCHHHHHHHHHHHHHHHHHH---TTTTCTT
T ss_pred CHHHHHHHHHHHHHHHHhhhhhCCHHHHHHHHHHHHHHHHHHccCccccccchHHHHHHHHHHHHHHHHh---ChhhccH
Confidence 445566677777665532 223333333333 333332222 23455566667777776643 3233556
Q ss_pred HHHHHHHHhccCcHHHHHHHHHHHHHHHHh-cC-------------------CChHhHHHHHHHHhh-cCChHHHHHHHH
Q 000156 367 LLPVLLEKLKEKKPTVAESLTQTLQAMHKA-GC-------------------LNLVDVVEDVKTSVK-NKVPLVRSLTLN 425 (2015)
Q Consensus 367 llp~LL~klkdkk~~V~~aa~~aL~al~~~-~~-------------------~~l~~il~~l~~~L~-~Knp~vR~~~l~ 425 (2015)
+++.++..++. +...++.....|..+..- .. ..++.+++.+...++ ..++.+...++.
T Consensus 151 fi~dLv~~~~~-~~~~~~~~L~IL~~L~EEV~d~~~~~l~~~r~~~lk~~L~~~~~~Il~ll~~iL~~~~~~~lv~~~L~ 229 (1073)
T 3gjx_A 151 FISDIVGASRT-SESLCQNNMVILKLLSEEVFDFSSGQITQVKAKHLKDSMCNEFSQIFQLCQFVMENSQNAPLVHATLE 229 (1073)
T ss_dssp HHHHHHHHHHH-CHHHHHHHHHHHHHHHHHHTTSHHHHBCHHHHHHHHHHHHHTCHHHHHHHHHHHHHCCCHHHHHHHHH
T ss_pred HHHHHHHHhCC-CHHHHHHHHHHHHHHHHHHHhcccccccHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHH
Confidence 66666666643 233344444444444322 00 112344454445554 567888888888
Q ss_pred HHHHHHHhcChhHHHHhhhhHHHHH-HHHhcCCCHHHHHHHHHHHHHHHHH
Q 000156 426 WVTFCIETSSKAAVLKVHKDYVPIC-MECLNDGTPEVRDAAFSVLAAIAKS 475 (2015)
Q Consensus 426 ~L~~~l~~~~~~~l~~~l~~l~p~l-~k~L~Ds~~~VR~aA~~al~~l~~~ 475 (2015)
.|..++.=.+-..+.. ..+++.+ ...|+ ++++|++|.+||..+...
T Consensus 230 ~L~~~~sWI~i~~i~~--~~ll~~L~~~~L~--~~~~r~aA~dcL~eIv~k 276 (1073)
T 3gjx_A 230 TLLRFLNWIPLGYIFE--TKLISTLIYKFLN--VPMFRNVSLKCLTEIAGV 276 (1073)
T ss_dssp HHHHHTTTSCTHHHHS--SSHHHHHHHHTSS--SHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHhcCHHHhcc--chHHHHHHHHhcC--ChHHHHHHHHHHHHHHhc
Confidence 8887665334433322 4577776 57774 578999999999998865
No 130
>4gmo_A Putative uncharacterized protein; ARM, heat, solenoid, nuclear transport, chaperone, RPL5, RPL KAP104, nucleus; 2.10A {Chaetomium thermophilum var} PDB: 4gmn_A
Probab=74.24 E-value=4.1 Score=54.25 Aligned_cols=78 Identities=13% Similarity=0.134 Sum_probs=57.2
Q ss_pred hHHHHHHHHhhcCChHHHHHHHHHHHHHHHhcChhHHHHhhhhHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhCchHH
Q 000156 403 DVVEDVKTSVKNKVPLVRSLTLNWVTFCIETSSKAAVLKVHKDYVPICMECLNDGTPEVRDAAFSVLAAIAKSVGMRPL 481 (2015)
Q Consensus 403 ~il~~l~~~L~~Knp~vR~~~l~~L~~~l~~~~~~~l~~~l~~l~p~l~k~L~Ds~~~VR~aA~~al~~l~~~~Ge~~~ 481 (2015)
.++|.| .-|++.++..|..++..|..+++......+.-.-+.+.+.+..+|.|++.+||.+|..+|..+...-|.+..
T Consensus 35 ~i~Pll-~~L~S~~~~~r~~A~~al~~l~~~~~~~~l~~~~~~v~~ll~~lL~D~~~~Vr~~A~gaLrnL~~~~g~d~~ 112 (684)
T 4gmo_A 35 KILPVL-KDLKSPDAKSRTTAAGAIANIVQDAKCRKLLLREQVVHIVLTETLTDNNIDSRAAGWEILKVLAQEEEADFC 112 (684)
T ss_dssp TTHHHH-HHHSSSCCSHHHHHHHHHHHHTTSHHHHHHHHHTTHHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHSCHHHH
T ss_pred hHHHHH-HHcCCCCHHHHHHHHHHHHHHHcCcHHHHHHHHcCCHHHHHHHHcCCCCHHHHHHHHHHHHHHHhhcCchHH
Confidence 456644 458899999999999999998753221122122244556678899999999999999999999888776543
No 131
>1elk_A Target of MYB1; superhelix of helices, endocytosis/exocytosis complex; 1.50A {Homo sapiens} SCOP: a.118.9.2
Probab=73.30 E-value=30 Score=36.78 Aligned_cols=81 Identities=17% Similarity=0.197 Sum_probs=60.9
Q ss_pred CCChHhHHHHHHHHhh-cCChHHHHHHHHHHHHHHHhcChhHHHHh-hhhHHHH-HHHHhc---CCCHHHHHHHHHHHHH
Q 000156 398 CLNLVDVVEDVKTSVK-NKVPLVRSLTLNWVTFCIETSSKAAVLKV-HKDYVPI-CMECLN---DGTPEVRDAAFSVLAA 471 (2015)
Q Consensus 398 ~~~l~~il~~l~~~L~-~Knp~vR~~~l~~L~~~l~~~~~~~l~~~-l~~l~p~-l~k~L~---Ds~~~VR~aA~~al~~ 471 (2015)
..+..+.+..|..-++ ++|+.+...+|..|..|+.++++..-... -+.++.. +++.+. ++...||+.+.+.+..
T Consensus 48 ~~~~k~a~ral~krl~~~~n~~v~l~AL~LLd~~vkNcG~~fh~eva~~~fl~e~Lvk~~~~k~~~~~~Vk~kil~li~~ 127 (157)
T 1elk_A 48 EEGPKDALRAVKKRIVGNKNFHEVMLALTVLETCVKNCGHRFHVLVASQDFVESVLVRTILPKNNPPTIVHDKVLNLIQS 127 (157)
T ss_dssp SSHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHSCHHHHHHHTSHHHHHHHTHHHHSTTTCCCHHHHHHHHHHHHH
T ss_pred CccHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHhCHHHHHHHhhHHHHHHHHHHHhccCCCCcHHHHHHHHHHHHH
Confidence 3456677777777887 59999999999999999999986532211 2456665 666663 4566999999999999
Q ss_pred HHHHhCc
Q 000156 472 IAKSVGM 478 (2015)
Q Consensus 472 l~~~~Ge 478 (2015)
....++.
T Consensus 128 W~~~f~~ 134 (157)
T 1elk_A 128 WADAFRS 134 (157)
T ss_dssp HHHHHTT
T ss_pred HHHHcCC
Confidence 8888864
No 132
>3zyq_A Hepatocyte growth factor-regulated tyrosine kinas substrate; signaling; 1.48A {Homo sapiens} PDB: 4avx_A*
Probab=71.80 E-value=32 Score=38.90 Aligned_cols=82 Identities=16% Similarity=0.153 Sum_probs=61.2
Q ss_pred CCChHhHHHHHHHHhhcCChHHHHHHHHHHHHHHHhcChhHHHH-hhhhHHHHHHHHhc-CCCHHHHHHHHHHHHHHHHH
Q 000156 398 CLNLVDVVEDVKTSVKNKVPLVRSLTLNWVTFCIETSSKAAVLK-VHKDYVPICMECLN-DGTPEVRDAAFSVLAAIAKS 475 (2015)
Q Consensus 398 ~~~l~~il~~l~~~L~~Knp~vR~~~l~~L~~~l~~~~~~~l~~-~l~~l~p~l~k~L~-Ds~~~VR~aA~~al~~l~~~ 475 (2015)
..+..+.+..|..-++++||.+...+|..|..|+.+++...... .-+.++..|.+++. ..+++||+...+.+......
T Consensus 40 ~~~~k~a~ral~krl~~~n~~v~l~aL~LLe~~vkNcG~~f~~eias~~fl~~l~~l~~~~~~~~Vk~kil~li~~W~~~ 119 (226)
T 3zyq_A 40 DTQAKYAVNSIKKKVNDKNPHVALYALEVMESVVKNCGQTVHDEVANKQTMEELKDLLKRQVEVNVRNKILYLIQAWAHA 119 (226)
T ss_dssp SSCHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHHCHHHHHHHSSHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
T ss_pred CccHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHhcchHHHHhhccHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHH
Confidence 35567777778888899999999999999999999988642211 12444445555553 46789999999999999988
Q ss_pred hCch
Q 000156 476 VGMR 479 (2015)
Q Consensus 476 ~Ge~ 479 (2015)
+...
T Consensus 120 f~~~ 123 (226)
T 3zyq_A 120 FRNE 123 (226)
T ss_dssp TTTC
T ss_pred hCCC
Confidence 8654
No 133
>3grl_A General vesicular transport factor P115; vesicle transport, membrane trafficking, membrane tethering, fusion, snare, RAB GTPase, armadillo repeats; 2.00A {Bos taurus} PDB: 3gq2_A 2w3c_A
Probab=69.68 E-value=71 Score=41.46 Aligned_cols=170 Identities=15% Similarity=0.132 Sum_probs=97.1
Q ss_pred hhhcc-CChHHHHHHHHHHHHHhcCCCCCCCChHH-HHHHHHHHhc-c-cCHHHHHHHHHHHHHHHHHhhhcchhhhHhH
Q 000156 292 EGVKA-TKWSERKDAVAELTKLASTKRIAPGDFTE-VCRTLKKLIT-D-VNIAVAVEAIQAIGNLARGLRTHFSGSSRFL 367 (2015)
Q Consensus 292 ~~l~s-~kWkeR~eaL~~L~~l~~~~ki~~~~y~~-l~~~L~k~l~-D-~N~~V~~~A~~~l~~La~~L~~~f~~~~~~l 367 (2015)
+++.+ .--.+|++|+..|+.+.+. .+...+. -++.|...+. | .+.-++..++.+|-.+... ...+.. ..
T Consensus 28 ~Rl~~~tl~eDRR~Av~~Lk~~sk~---y~~~Vg~~~l~~li~~L~~d~~D~e~v~~~LetL~~l~~~--~~~~~~-~~- 100 (651)
T 3grl_A 28 DRVASSTLLDDRRNAVRALKSLSKK---YRLEVGIQAMEHLIHVLQTDRSDSEIIGYALDTLYNIISN--DEEEEV-EE- 100 (651)
T ss_dssp HHHHHCCSHHHHHHHHHHHHHTTTT---TTTHHHHHTHHHHHHHHHSCTTCHHHHHHHHHHHHHHHCC--C---------
T ss_pred HHHhhccchhHHHHHHHHHHHHHHH---hHHHhhhhhHHHHHHHHhcccccHHHHHHHHHHHHHHhCC--CCcccc-cc-
Confidence 34453 6677888888888887532 1122222 2555566665 3 4555555544444443211 111100 00
Q ss_pred HHHHHHHhccCcHHHHHHHHHHHHHHHHhcCCChHhHHHHHHHHhhcCChHHHHHHHHHHHHHHHhcChhHHHHh---hh
Q 000156 368 LPVLLEKLKEKKPTVAESLTQTLQAMHKAGCLNLVDVVEDVKTSVKNKVPLVRSLTLNWVTFCIETSSKAAVLKV---HK 444 (2015)
Q Consensus 368 lp~LL~klkdkk~~V~~aa~~aL~al~~~~~~~l~~il~~l~~~L~~Knp~vR~~~l~~L~~~l~~~~~~~l~~~---l~ 444 (2015)
.......+-+..-.+.+.+. .+-++.++..|++.+-.+|..+++.|..++...+.. ..++ .+
T Consensus 101 ---------~~~~~~~~~~~~~~d~f~~~-----~~~i~~Ll~lL~~~df~vR~~alqlL~~L~~~r~~~-~Q~~Il~~p 165 (651)
T 3grl_A 101 ---------NSTRQSEDLGSQFTEIFIKQ-----QENVTLLLSLLEEFDFHVRWPGVKLLTSLLKQLGPQ-VQQIILVSP 165 (651)
T ss_dssp ----------------CHHHHHHHHHHHS-----THHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHSHHH-HHHHHHHST
T ss_pred ---------cccccchHHHHHHHHHHHcC-----CccHHHHHHHhcCccHHHHHHHHHHHHHHHhcCcHH-HHHHHHhCc
Confidence 00000111112222344332 355677888899999999999999999987765432 2322 24
Q ss_pred hHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhCchHHHHHH
Q 000156 445 DYVPICMECLNDGTPEVRDAAFSVLAAIAKSVGMRPLERSI 485 (2015)
Q Consensus 445 ~l~p~l~k~L~Ds~~~VR~aA~~al~~l~~~~Ge~~~~~~l 485 (2015)
.-++.|+..|.|+...+|..|.-.|..+.+ ++..+.+++
T Consensus 166 ~gi~~Lv~lL~d~rE~iRneallLL~~Lt~--~n~~iQklV 204 (651)
T 3grl_A 166 MGVSRLMDLLADSREVIRNDGVLLLQALTR--SNGAIQKIV 204 (651)
T ss_dssp THHHHHHGGGGCSSHHHHHHHHHHHHHHHT--TCHHHHHHH
T ss_pred ccHHHHHHHHhCchHHHHHHHHHHHHHHhc--CCHHHHHHH
Confidence 678999999999999999999988887765 343444433
No 134
>4atg_A TAF6; transcription, TFIID; HET: NHE; 1.89A {Antonospora locustae}
Probab=68.25 E-value=68 Score=35.30 Aligned_cols=121 Identities=9% Similarity=0.159 Sum_probs=72.9
Q ss_pred HHHHHHHHHHHHHHHhccccCCCCChhhHHHHHHhcccc------chHHHHHHHHHHHHHHHHHhChhhHHhhhHHHHHH
Q 000156 868 KVRLESIEAVNKILEEANKRIQPAGTGELFGGLRGRLYD------SNKNLVMATLITLGAVASAMGPAVEKSSKGVLSDI 941 (2015)
Q Consensus 868 k~R~eale~L~~ll~~a~~~I~~~~~~eL~~~L~~rL~D------sN~~V~~~Al~~l~~La~alg~~f~~~~~~llp~l 941 (2015)
..|.+|++.|+. +..+ ..|++.|...+.+ .|..+....++.+..|...-.-.+++|+..++|++
T Consensus 23 ~~r~~aL~sL~~-----D~gL-----~~LlPyf~~fI~~~v~~nl~~l~~L~~lm~~~~ALl~N~~l~lepYlH~Lipsv 92 (196)
T 4atg_A 23 DMKDIAIECLEK-----ESGL-----QQLVPYFIQHISELILKSFKEAEVLKTCIALYFSLIKNKHVFIDPYLHQILPSL 92 (196)
T ss_dssp TTHHHHHHHHHH-----CSSC-----TTTHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHCTTCCCGGGHHHHHHHH
T ss_pred HHHHHHHHHHhc-----CCCh-----hhhHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHcCCCCChHHHHHHHHHHH
Confidence 458888888763 2333 4455555443321 13444444555555555544456899999999999
Q ss_pred HHHhCCCc---HHHHHHHHHHHHHHHHhcC--chh----hHHHHHHHHhcCCCChhHHHHHHHHHH
Q 000156 942 LKCLGDNK---KHMRECTLTVLDAWLAAVH--LDK----MVPYVTTALTDAKLGAEGRKDLFDWLS 998 (2015)
Q Consensus 942 l~~L~D~k---~~Vr~aa~~aL~~i~~~~g--l~~----ll~~l~~~L~~~k~~p~~R~~~l~~L~ 998 (2015)
+.++-.++ ..+|+-|...|..++...+ ... ++..+..++.|++.+.....+++..|.
T Consensus 93 LtCll~k~l~~~~LRd~AA~lL~~I~~~~~~~y~~L~~RI~~tl~k~l~dp~~~l~t~YGAi~GL~ 158 (196)
T 4atg_A 93 LTCVIGKSIVDDDVRKMSADIVKYIYDTYSRSYKTLAPRVLKTLKGVWMDPNRSEDSQYGALYCLS 158 (196)
T ss_dssp HHHHHCTTCCCHHHHHHHHHHHHHHHHHHTTTSTTHHHHHHHHHHHHHTCTTSCHHHHHHHHHHHH
T ss_pred HHHHHhcccCHHHHHHHHHHHHHHHHHHhCccCchHHHHHHHHHHHHHcCCCCChHHHHHHHHHHH
Confidence 99884321 1699999999999998875 233 333444444444334444555555544
No 135
>3rru_A TOM1L1 protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, super-helical protein; 3.00A {Homo sapiens}
Probab=67.32 E-value=9 Score=40.58 Aligned_cols=77 Identities=13% Similarity=0.173 Sum_probs=59.5
Q ss_pred hhhhHHHHHHHHhh-cCChhhHHHHHHHHHHHHHHhCCC---CcChhHHHhh-hhhhhcCC---ChhHHHHHHHHHHHHH
Q 000156 125 AVDVFLDVMEKAIK-NKVAKAVVPAIDVMFQALSEFGAK---IIPPKRILKM-LPELFDHQ---DQNVRASSKGLTLELC 196 (2015)
Q Consensus 125 ~~~~v~~~L~~~~~-~KnpKv~~~~l~~L~~~l~~fG~~---~i~~k~il~~-l~~ll~~~---d~~VR~~a~~l~~ely 196 (2015)
++..++..|.+.+. ++||+++.-+|..|-.++++=|.. .|.-+.|+.. |.+++... ...||+....++.+-.
T Consensus 50 ~pkeA~ral~KRl~~~~n~~~~l~AL~LLe~cvkNCG~~fh~eiask~Fl~e~L~kl~~~~~~~~~~Vk~kil~li~~Wa 129 (152)
T 3rru_A 50 GPKDAVKALKKRISKNYNHKEIQLTLSLIDMCVQNCGPSFQSLIVKKEFVKENLVKLLNPRYNLPLDIQNRILNFIKTWS 129 (152)
T ss_dssp HHHHHHHHHHHHHTTCCBHHHHHHHHHHHHHHHHHSCHHHHHHHSSHHHHTTTTGGGGSGGGCCCHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHhcCHHHHHHHHhhHhHHHHHHHHhcCCCCCcHHHHHHHHHHHHHHH
Confidence 46788889988888 479999999999999999987763 2344678864 88888643 4579999888887777
Q ss_pred HHhCC
Q 000156 197 RWIGK 201 (2015)
Q Consensus 197 ~~lG~ 201 (2015)
.+.+.
T Consensus 130 ~~F~~ 134 (152)
T 3rru_A 130 QGFPG 134 (152)
T ss_dssp TCCSS
T ss_pred HHhCC
Confidence 66543
No 136
>1dvp_A HRS, hepatocyte growth factor-regulated tyrosine kinase substrate; VHS, FYVE, zinc finger, superhelix, transferase; HET: CIT; 2.00A {Drosophila melanogaster} SCOP: a.118.9.2 g.50.1.1
Probab=66.52 E-value=24 Score=39.68 Aligned_cols=62 Identities=8% Similarity=0.070 Sum_probs=47.2
Q ss_pred hccCChHHHHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHhhhcchh
Q 000156 294 VKATKWSERKDAVAELTKLASTKRIAPGDFTEVCRTLKKLITDVNIAVAVEAIQAIGNLARGLRTHFSG 362 (2015)
Q Consensus 294 l~s~kWkeR~eaL~~L~~l~~~~ki~~~~y~~l~~~L~k~l~D~N~~V~~~A~~~l~~La~~L~~~f~~ 362 (2015)
+.+.+|..-.+ |..+++.. +..-.+.+++|+++|...|+.+...|+.+|+.+.+.-|..|..
T Consensus 18 ~~~~dw~~~le----icd~i~~~---~~~~k~a~r~l~krl~~~n~~~~l~aL~Lle~~vkNcG~~f~~ 79 (220)
T 1dvp_A 18 RLEPDWPSILL----ICDEINQK---DVTPKNAFAAIKKKMNSPNPHSSCYSLLVLESIVKNCGAPVHE 79 (220)
T ss_dssp CSSCCHHHHHH----HHHHHHTT---SSCHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHSHHHHHH
T ss_pred CCCcCHHHHHH----HHHhhcCC---CcCHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhccCHHHHH
Confidence 45688875433 44444321 2245689999999999999999999999999999998887754
No 137
>4atg_A TAF6; transcription, TFIID; HET: NHE; 1.89A {Antonospora locustae}
Probab=65.02 E-value=53 Score=36.13 Aligned_cols=131 Identities=14% Similarity=0.157 Sum_probs=80.2
Q ss_pred HHHhhhccCCHHHHHHHHHHHHHHHHhccccchHHHHHHHHHhcC--CCCcccHHHHHHHHHHHHHHHHHHcCCCchhHH
Q 000156 605 DTVGQLKSAVWKERLEAISSLRQQVEAVQNLDQSVEILVRLVCML--PGWSEKNVQVQQQVIEVINYLAATATKFPKKCV 682 (2015)
Q Consensus 605 ~l~~~L~s~~Wk~Rl~a~e~L~~~v~~~~~~~~~~~~Lv~~L~~~--pg~~DsN~qV~~~~Le~l~~l~~~~~~~~~~~~ 682 (2015)
++.+.+.+ ..|.+|++.|.+ + .....-..-+++++... -.++ |..+....++++.+++.+-.-+...++
T Consensus 15 ~It~a~~~---~~r~~aL~sL~~---D-~gL~~LlPyf~~fI~~~v~~nl~--~l~~L~~lm~~~~ALl~N~~l~lepYl 85 (196)
T 4atg_A 15 KILSMIKS---DMKDIAIECLEK---E-SGLQQLVPYFIQHISELILKSFK--EAEVLKTCIALYFSLIKNKHVFIDPYL 85 (196)
T ss_dssp HHHHHHTS---TTHHHHHHHHHH---C-SSCTTTHHHHHHHHHHHHHHCTT--CHHHHHHHHHHHHHHHHCTTCCCGGGH
T ss_pred HHHHHHHh---HHHHHHHHHHhc---C-CChhhhHHHHHHHHHHHHHhccC--CHHHHHHHHHHHHHHHcCCCCChHHHH
Confidence 44444444 458888887762 1 11212222334433211 0122 677888889999999987444556677
Q ss_pred HHHHHHHHhhhcc-----hhhhHHHHHHHHHHHhhhChh------HHHHHHHHHhhh-CCChhHHHHHHHHHHH
Q 000156 683 VLCLLGISERVAD-----IKTRAHAMKCLTTFSEAVGPG------FIFERLYKIMKD-HKNPKVLSEGILWMVS 744 (2015)
Q Consensus 683 ~~il~~LveKlgD-----~K~r~~a~~~L~~l~e~~~~~------~Vl~~L~~~l~~-~KnpKv~~~~l~~L~~ 744 (2015)
..++|.++.-+.. ..+|+-|.++|..++..++.. .|...+.+.+.+ .++.-.+.+++..|..
T Consensus 86 H~LipsvLtCll~k~l~~~~LRd~AA~lL~~I~~~~~~~y~~L~~RI~~tl~k~l~dp~~~l~t~YGAi~GL~~ 159 (196)
T 4atg_A 86 HQILPSLLTCVIGKSIVDDDVRKMSADIVKYIYDTYSRSYKTLAPRVLKTLKGVWMDPNRSEDSQYGALYCLSI 159 (196)
T ss_dssp HHHHHHHHHHHHCTTCCCHHHHHHHHHHHHHHHHHHTTTSTTHHHHHHHHHHHHHTCTTSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHHhCccCchHHHHHHHHHHHHHcCCCCChHHHHHHHHHHHH
Confidence 7777766654433 358999999999999988742 244444444433 5777788888877654
No 138
>1vdy_A Hypothetical protein (RAFL09-17-B18); structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Arabidopsis thaliana} PDB: 2dcp_A
Probab=64.06 E-value=7.3 Score=40.56 Aligned_cols=88 Identities=15% Similarity=0.133 Sum_probs=61.4
Q ss_pred HHHHHHHHhcCCCCCC-CChHHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHhhhcchhhhHhHHHHHHHHhc-------
Q 000156 305 AVAELTKLASTKRIAP-GDFTEVCRTLKKLITDVNIAVAVEAIQAIGNLARGLRTHFSGSSRFLLPVLLEKLK------- 376 (2015)
Q Consensus 305 aL~~L~~l~~~~ki~~-~~y~~l~~~L~k~l~D~N~~V~~~A~~~l~~La~~L~~~f~~~~~~llp~LL~klk------- 376 (2015)
.+++|..+.... . ..+.+|+..|.++|++.+..++..|+++|.+|+..=...|...++.-+.. ++.+.
T Consensus 31 lm~EIA~~T~~s---~~~~~~eim~~L~kRL~~k~~~vk~KaL~lL~yL~~~Gs~~f~~~~r~~~~~-Ik~l~~F~g~~d 106 (140)
T 1vdy_A 31 KLEEICDLLRSS---HVSIVKEFSEFILKRLDNKSPIVKQKALRLIKYAVGKSGSEFRREMQRNSVA-VRNLFHYKGHPD 106 (140)
T ss_dssp HHHHHHHHHHHS---CHHHHHHHHHHHHHHHTSSSHHHHHHHHHHHHHHTTTSCHHHHHHHHHTTHH-HHTTTTCCCCCC
T ss_pred HHHHHHHHHHhc---chhHHHHHHHHHHHHhcCCCcceeehHHHHHHHHHHhCCHHHHHHHHHhHHH-HHHHHhcCCCCC
Confidence 455665554211 1 12478999999999999999999999999999976566676555544432 33222
Q ss_pred -----cCcHHHHHHHHHHHHHHHHh
Q 000156 377 -----EKKPTVAESLTQTLQAMHKA 396 (2015)
Q Consensus 377 -----dkk~~V~~aa~~aL~al~~~ 396 (2015)
+....||+.|.+++..|+..
T Consensus 107 p~~G~d~g~~VR~~AkEl~~ll~d~ 131 (140)
T 1vdy_A 107 PLKGDALNKAVRETAHETISAIFSE 131 (140)
T ss_dssp TTTSSCHHHHHHHHHHHHHHHHTCC
T ss_pred cccccchhHHHHHHHHHHHHHHhCc
Confidence 22368999999999988754
No 139
>1vdy_A Hypothetical protein (RAFL09-17-B18); structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Arabidopsis thaliana} PDB: 2dcp_A
Probab=61.83 E-value=8.5 Score=40.08 Aligned_cols=99 Identities=14% Similarity=0.114 Sum_probs=67.1
Q ss_pred cCCCChHHHHHHHHHHHHHHHhccccCCCCChhhHHHHHHhccccchHHHHHHHHHHHHHHHHHhChhhHHhhhHHHHHH
Q 000156 862 LESPDWKVRLESIEAVNKILEEANKRIQPAGTGELFGGLRGRLYDSNKNLVMATLITLGAVASAMGPAVEKSSKGVLSDI 941 (2015)
Q Consensus 862 l~d~~Wk~R~eale~L~~ll~~a~~~I~~~~~~eL~~~L~~rL~DsN~~V~~~Al~~l~~La~alg~~f~~~~~~llp~l 941 (2015)
.+|.+|=.=--.+++|.++.... ....+.+++..|.+||+|.+++++..||++|..|+..-...|...++.=+. +
T Consensus 20 Ts~d~~~~pgylm~EIA~~T~~s----~~~~~~eim~~L~kRL~~k~~~vk~KaL~lL~yL~~~Gs~~f~~~~r~~~~-~ 94 (140)
T 1vdy_A 20 TSDEDKVAPVYKLEEICDLLRSS----HVSIVKEFSEFILKRLDNKSPIVKQKALRLIKYAVGKSGSEFRREMQRNSV-A 94 (140)
T ss_dssp TCSCSSCCCHHHHHHHHHHHHHS----CHHHHHHHHHHHHHHHTSSSHHHHHHHHHHHHHHTTTSCHHHHHHHHHTTH-H
T ss_pred hcCCCCCCcHHHHHHHHHHHHhc----chhHHHHHHHHHHHHhcCCCcceeehHHHHHHHHHHhCCHHHHHHHHHhHH-H
Confidence 34445544444566666665431 111247999999999999999999999999999997666677665555443 3
Q ss_pred HHHhC------C------CcHHHHHHHHHHHHHHHH
Q 000156 942 LKCLG------D------NKKHMRECTLTVLDAWLA 965 (2015)
Q Consensus 942 l~~L~------D------~k~~Vr~aa~~aL~~i~~ 965 (2015)
++.|. | ....||+.|.+++..+..
T Consensus 95 Ik~l~~F~g~~dp~~G~d~g~~VR~~AkEl~~ll~d 130 (140)
T 1vdy_A 95 VRNLFHYKGHPDPLKGDALNKAVRETAHETISAIFS 130 (140)
T ss_dssp HHTTTTCCCCCCTTTSSCHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHhcCCCCCcccccchhHHHHHHHHHHHHHHhC
Confidence 44333 2 225799999888877654
No 140
>1w9c_A CRM1 protein, exportin 1; nuclear protein, nuclear export complex; 2.3A {Homo sapiens} SCOP: a.118.1.19
Probab=54.07 E-value=97 Score=36.75 Aligned_cols=157 Identities=14% Similarity=0.190 Sum_probs=103.3
Q ss_pred HHHHHHHHHHHHHhc-CCCCCCCChHHHHHHHH-HHhccc--CHHHH--HHHHHHHHHHHHHhhhcchhhhHhHHHHHHH
Q 000156 300 SERKDAVAELTKLAS-TKRIAPGDFTEVCRTLK-KLITDV--NIAVA--VEAIQAIGNLARGLRTHFSGSSRFLLPVLLE 373 (2015)
Q Consensus 300 keR~eaL~~L~~l~~-~~ki~~~~y~~l~~~L~-k~l~D~--N~~V~--~~A~~~l~~La~~L~~~f~~~~~~llp~LL~ 373 (2015)
..|+|.|+-+...++ .+... .-...+++.|. .++.|= |+... .+.+.++..+.+.++..+.+++..++..+++
T Consensus 44 ~vKkeiLkLiet~i~~~~d~~-~v~~~~ippLl~~VL~DY~~~vp~aRepeVL~l~~tii~kl~~~i~~~vp~Il~~VFe 122 (321)
T 1w9c_A 44 TVKRETLKLISGWVSRSNDPQ-MVAENFVPPLLDAVLIDYQRNVPAAREPEVLSTMAIIVNKLGGHITAEIPQIFDAVFE 122 (321)
T ss_dssp HHHHHHHHHHHHHHTTCSCHH-HHHHHTHHHHHHHHHHHHHTSCGGGCCTHHHHHHHHHHHHHGGGGGGGHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCCHH-HHHHHHHHHHHHHHHHHHHhCCcccccHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHH
Confidence 357777777777663 22110 01233343333 334322 22222 4558889999999999999998888888877
Q ss_pred Hhc-------cCcHHHHHHHHHHHHHHHHhcCCC---------hHhHHHHHHHHhhcCChHHHHHHHHHHHHHHHhcCh-
Q 000156 374 KLK-------EKKPTVAESLTQTLQAMHKAGCLN---------LVDVVEDVKTSVKNKVPLVRSLTLNWVTFCIETSSK- 436 (2015)
Q Consensus 374 klk-------dkk~~V~~aa~~aL~al~~~~~~~---------l~~il~~l~~~L~~Knp~vR~~~l~~L~~~l~~~~~- 436 (2015)
..- +.-|..|.+-...|.++..+ |.. +..+++.|.=|.+|-++.|-...|+.+..++.+..+
T Consensus 123 ~TL~MI~~df~eyPehR~~Ff~LL~ai~~~-cF~al~~lp~~~fklvidsiiWa~kH~~r~V~e~gL~il~~ll~n~~~~ 201 (321)
T 1w9c_A 123 CTLNMINKDFEEYPEHRTNFFLLLQAVNSH-CFPAFLAIPPTQFKLVLDSIIWAFKHTMRNVADTGLQILFTLLQNVAQE 201 (321)
T ss_dssp HHHHHHSSTTTCSHHHHHHHHHHHHHHHHH-CTTHHHHSCHHHHHHHHHHHHHHTTCSSHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHhcccccChHHHHHHHHHHHHHHHH-hHHHHHcCCHHHHHHHHHHHHHHcCCCCchHHHHHHHHHHHHHHHHhcC
Confidence 653 46788999999999999988 644 355678888889999999999999998888876532
Q ss_pred hH-----HHHhhhhHHHHHHHHhcCCC
Q 000156 437 AA-----VLKVHKDYVPICMECLNDGT 458 (2015)
Q Consensus 437 ~~-----l~~~l~~l~p~l~k~L~Ds~ 458 (2015)
.. ...+.-.++.-+...+.|++
T Consensus 202 ~~~~~~Fy~~fy~~il~~if~VlTDs~ 228 (321)
T 1w9c_A 202 EAAAQSFYQTYFCDILQHIFSVVTDTS 228 (321)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHSSS
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHhCch
Confidence 11 12334445555556666665
No 141
>3dad_A FH1/FH2 domain-containing protein 1; formin, FHOD1, GTPase-binding domain, ubiquitin-superfold, armadillo repeats, actin-binding, coiled coil; 2.30A {Homo sapiens}
Probab=53.01 E-value=2.5e+02 Score=33.38 Aligned_cols=124 Identities=14% Similarity=0.064 Sum_probs=82.4
Q ss_pred HHHHhcCCCChHHHHHHHHHHHHHHHh---ccccCCCCChhhHHHHHHhccccchHHHHHHHHHHHHHHHHHhChhhHHh
Q 000156 857 TLVKSLESPDWKVRLESIEAVNKILEE---ANKRIQPAGTGELFGGLRGRLYDSNKNLVMATLITLGAVASAMGPAVEKS 933 (2015)
Q Consensus 857 ~ll~~l~d~~Wk~R~eale~L~~ll~~---a~~~I~~~~~~eL~~~L~~rL~DsN~~V~~~Al~~l~~La~alg~~f~~~ 933 (2015)
.|++.+.+.+...-.=+|..+.+++.. -+.-+. . .+++.-|...++.....|++.|+.++..++..-..++.-.
T Consensus 164 ~Li~vi~~~~gN~q~Y~L~AL~~LM~~v~Gm~gvvs--~-~~fI~~lyslv~s~~~~V~k~AL~LL~v~V~~se~~~~lv 240 (339)
T 3dad_A 164 CLIRVGAAADHNYQSYILRALGQLMLFVDGMLGVVA--H-SDTIQWLYTLCASLSRLVVKTALKLLLVFVEYSENNAPLF 240 (339)
T ss_dssp HHHHHHTTSCHHHHHHHHHHHHHHTTSHHHHHHHHH--C-HHHHHHHHHGGGCSCHHHHHHHHHHHHHHHHHCGGGHHHH
T ss_pred HHHHHHHhcChHHHHHHHHHHHHHHhccccccchhC--C-HHHHHHHHHHHcCccHHHHHHHHHHHHHHHccCcccchHH
Confidence 345555556777777778888877752 001111 1 4566777777777789999999999999987764443322
Q ss_pred hhH-----------HHHHHHHHhC---CCcHHHHHHHHHHHHHHHHhcCchhhHHHHHHHHhcC
Q 000156 934 SKG-----------VLSDILKCLG---DNKKHMRECTLTVLDAWLAAVHLDKMVPYVTTALTDA 983 (2015)
Q Consensus 934 ~~~-----------llp~ll~~L~---D~k~~Vr~aa~~aL~~i~~~~gl~~ll~~l~~~L~~~ 983 (2015)
.+. .+..++..|. .....+...|+.-++.++..++-..-...+.+.|+..
T Consensus 241 ~~av~~v~~~~~~~p~~~Lv~~L~~~~~~D~elq~~amtLIN~lL~~apd~d~~~di~d~Le~~ 304 (339)
T 3dad_A 241 IRAVNSVASTTGAPPWANLVSILEEKNGADPELLVYTVTLINKTLAALPDQDSFYDVTDALEQQ 304 (339)
T ss_dssp HHHHHHHHHHHCCCTTHHHHHHHTTTTSCCHHHHHHHHHHHHHHHHHCSSHHHHHHHHHHHHHT
T ss_pred HHHHHHhhhccCCCcHHHHHHHHhccCCCCHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHc
Confidence 221 1457777886 5678899999999999998877444345677777643
No 142
>4flb_A Regulation of nuclear PRE-mRNA domain-containing; structural genomics consortium, SGC, protein binding; 1.80A {Homo sapiens}
Probab=50.84 E-value=97 Score=31.59 Aligned_cols=103 Identities=8% Similarity=0.032 Sum_probs=62.1
Q ss_pred hHhHHHHHHHHhccCcHHHHHHHHHHHHHHHHhcCCChHhHHHHHHHHhhcCChHHHHHHHHHHHHHHHhcChh---HHH
Q 000156 364 SRFLLPVLLEKLKEKKPTVAESLTQTLQAMHKAGCLNLVDVVEDVKTSVKNKVPLVRSLTLNWVTFCIETSSKA---AVL 440 (2015)
Q Consensus 364 ~~~llp~LL~klkdkk~~V~~aa~~aL~al~~~~~~~l~~il~~l~~~L~~Knp~vR~~~l~~L~~~l~~~~~~---~l~ 440 (2015)
.+.-+-..|..+..++..+.....=|+. | ...-+.|++.+...++.-.+.-|...+=.+..++.++... .+.
T Consensus 6 ~e~~l~~~L~~L~~s~~sI~~~s~w~l~----h-~~~a~~Iv~~i~~~l~~~~~~~KL~~LYL~ndIl~ns~~~~~~~f~ 80 (132)
T 4flb_A 6 LESSLDRKFQSVTNTMESIQGLSSWCIE----N-KKHHSTIVYHWMKWLRRSAYPHRLNLFYLANDVIQNCKRKNAIIFR 80 (132)
T ss_dssp HHHHHHHHHHHCCSSHHHHHHHHHHHHH----T-GGGHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTTTTTCTHHH
T ss_pred HHHHHHHHHHHCcccHHHHHHHHHHHHH----h-HHHHHHHHHHHHHHHHcCChhhHHHHHHHHHHHHHHhcccChHHHH
Confidence 3455566677777777666655544443 3 2345678888888888777888887777777777765432 233
Q ss_pred HhhhhHHHHHHHHhcCCCHHHHHHHHHHHHHHH
Q 000156 441 KVHKDYVPICMECLNDGTPEVRDAAFSVLAAIA 473 (2015)
Q Consensus 441 ~~l~~l~p~l~k~L~Ds~~~VR~aA~~al~~l~ 473 (2015)
+.+..++|.+...+. ++++|..-.+++...-
T Consensus 81 ~~f~~~l~~~~~~~~--~~~~~~kl~~ll~iW~ 111 (132)
T 4flb_A 81 ESFADVLPEAAALVK--DPSVSKSVERIFKIWE 111 (132)
T ss_dssp HHHHTTHHHHHHTTC--STTTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhC--CHHHHHHHHHHHHHhc
Confidence 333344444444333 4567777776665544
No 143
>1sz9_A PCF11 protein; RNA polymerase II CTD interacting domain, arm repeats, transcription; 2.10A {Saccharomyces cerevisiae} SCOP: a.118.9.4 PDB: 1sza_A* 2bf0_X
Probab=50.55 E-value=65 Score=33.66 Aligned_cols=73 Identities=4% Similarity=0.032 Sum_probs=51.7
Q ss_pred hHhHHHHHHHHhhcCChHHHHHHHHHHHHHHHhcChhHHHHhhhhHHHHHHHHhcCCCHHHHHHHHHHHHHHH
Q 000156 401 LVDVVEDVKTSVKNKVPLVRSLTLNWVTFCIETSSKAAVLKVHKDYVPICMECLNDGTPEVRDAAFSVLAAIA 473 (2015)
Q Consensus 401 l~~il~~l~~~L~~Knp~vR~~~l~~L~~~l~~~~~~~l~~~l~~l~p~l~k~L~Ds~~~VR~aA~~al~~l~ 473 (2015)
-..|++.+...+..-+|.-|...|=.+..++.+++.......-+.+.+.+.......++.+|..-.+.+.+..
T Consensus 41 a~~Iv~~i~~~i~k~~p~~KL~~LYL~DsIvkN~g~~y~~~F~~~l~~~f~~~~~~~d~~~r~k~~rL~~~W~ 113 (144)
T 1sz9_A 41 AQYFVDAIESRIEKCMPKQKLYAFYALDSICKNVGSPYTIYFSRNLFNLYKRTYLLVDNTTRTKLINMFKLWL 113 (144)
T ss_dssp HHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTCTTHHHHHHTTHHHHHHHHHHTSCHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhccCCHhhHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHh
Confidence 3566777777777677888888887777777776654322334556667777777778999988888886665
No 144
>3fga_B Serine/threonine-protein phosphatase 2A 56 kDa RE subunit gamma isoform; PP2A, shugoshin, nucleus, phosphoprotein, hydrolase, iron, M metal-binding, methylation, protein phosphatase, cell cycle division; HET: 1ZN; 2.70A {Homo sapiens} PDB: 2iae_B* 2nym_B* 2nyl_B*
Probab=44.39 E-value=2.6e+02 Score=34.23 Aligned_cols=186 Identities=14% Similarity=0.125 Sum_probs=114.3
Q ss_pred hhhhhccCChHHHHHHHHHHHHHhcCCCCCCCChH-----HHHHHHHHHhc-ccCHHHHHHHHHHHHHHHHHhhhcch-h
Q 000156 290 FWEGVKATKWSERKDAVAELTKLASTKRIAPGDFT-----EVCRTLKKLIT-DVNIAVAVEAIQAIGNLARGLRTHFS-G 362 (2015)
Q Consensus 290 f~~~l~s~kWkeR~eaL~~L~~l~~~~ki~~~~y~-----~l~~~L~k~l~-D~N~~V~~~A~~~l~~La~~L~~~f~-~ 362 (2015)
+.+.+.+.+=+||.-.-.-|..+-. ++. .+. .+-..+..-+- ..+..-+.+-+.+++.+.+|...... -
T Consensus 134 Ll~lfdSeDprER~~LktiLhrIY~--kf~--~~R~~Irk~innif~~fiye~e~~~GIaeLLeilgsIinGfa~PLkee 209 (403)
T 3fga_B 134 LLELFDSEDPRERDFLKTTLHRIYG--KFL--GLRAYIRKQINNIFYRFIYETEHHNGIAELLEILGSIINGFALPLKEE 209 (403)
T ss_dssp HHHGGGCSCHHHHHHHHHHHHHHHH--HCH--HHHHHHHHHHHHHHHHHHHTTCCCTTHHHHHHHHHHHHHHCCSSCCHH
T ss_pred HHHHcCCCChHHHHHHHHHHHHHHH--hhh--hhHHHHHHHHHHHHHHHhcCcccCCCHHHHHHHHHHHHcccCCCchHH
Confidence 4455688999998765555555421 000 011 11112222222 22334566778999999998764443 3
Q ss_pred hhHhHHHHHHHHhccCcHH-HHHHHHHHHHHHHHhcCCChHhHHHHHHHHhhcCChHHHHHHHHHHHHHHHhcChhHHHH
Q 000156 363 SSRFLLPVLLEKLKEKKPT-VAESLTQTLQAMHKAGCLNLVDVVEDVKTSVKNKVPLVRSLTLNWVTFCIETSSKAAVLK 441 (2015)
Q Consensus 363 ~~~~llp~LL~klkdkk~~-V~~aa~~aL~al~~~~~~~l~~il~~l~~~L~~Knp~vR~~~l~~L~~~l~~~~~~~l~~ 441 (2015)
+..-+...|+-..+-+.-. -...+..|+..++.+.+.-...++..|+...---|++=..--++-+..+++..++..+.+
T Consensus 210 hk~fl~~vLlPLHk~~~~~~y~~qL~ycv~qf~eKDp~L~~~vi~~LLk~WP~tns~KevlFL~Ele~iLe~~~~~~f~~ 289 (403)
T 3fga_B 210 HKIFLLKVLLPLHKVKSLSVYHPQLAYCVVQFLEKDSTLTEPVVMALLKYWPKTHSPKEVMFLNELEEILDVIEPSEFVK 289 (403)
T ss_dssp HHHHHHHTTTGGGGSTTGGGTHHHHHHHHHHHHHHCGGGHHHHHHHHHHTCCSSCHHHHHHHHHHHHHHHTTCCHHHHHH
T ss_pred HHHHHHHHHHHHHcCCcchhhHHHHHHHHHHHHHhCchhHHHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHhCCHHHHHH
Confidence 3444555666666665443 357888888888877322223455555544444555444455777888888888888888
Q ss_pred hhhhHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhCchHHHHHHH
Q 000156 442 VHKDYVPICMECLNDGTPEVRDAAFSVLAAIAKSVGMRPLERSIE 486 (2015)
Q Consensus 442 ~l~~l~p~l~k~L~Ds~~~VR~aA~~al~~l~~~~Ge~~~~~~l~ 486 (2015)
....+...+.+|+...+-.|-+.|. ..+.++.+..++.
T Consensus 290 i~~~lf~~la~ci~S~hfqVAErAL-------~~wnNe~i~~li~ 327 (403)
T 3fga_B 290 IMEPLFRQLAKCVSSPHFQVAERAL-------YYWNNEYIMSLIS 327 (403)
T ss_dssp HHHHHHHHHHHHHTCSCHHHHHHHH-------GGGGCHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCCHHHHHHHH-------HHhccHHHHHHHH
Confidence 8899999999999999999966554 3455554444443
No 145
>3dad_A FH1/FH2 domain-containing protein 1; formin, FHOD1, GTPase-binding domain, ubiquitin-superfold, armadillo repeats, actin-binding, coiled coil; 2.30A {Homo sapiens}
Probab=42.67 E-value=5e+02 Score=30.88 Aligned_cols=132 Identities=11% Similarity=0.094 Sum_probs=84.7
Q ss_pred HHHHhccCcHHHHHHHHHHHHHHHHh-----cCCChHhHHHHHHHHhhcCChHHHHHHHHHHHHHHHhcChh--HHHHhh
Q 000156 371 LLEKLKEKKPTVAESLTQTLQAMHKA-----GCLNLVDVVEDVKTSVKNKVPLVRSLTLNWVTFCIETSSKA--AVLKVH 443 (2015)
Q Consensus 371 LL~klkdkk~~V~~aa~~aL~al~~~-----~~~~l~~il~~l~~~L~~Knp~vR~~~l~~L~~~l~~~~~~--~l~~~l 443 (2015)
|+.-..+...++..-+-.|+..++.+ +-++-..++..|...+.++.+.|=+.++..|..++...... .+.+..
T Consensus 165 Li~vi~~~~gN~q~Y~L~AL~~LM~~v~Gm~gvvs~~~fI~~lyslv~s~~~~V~k~AL~LL~v~V~~se~~~~lv~~av 244 (339)
T 3dad_A 165 LIRVGAAADHNYQSYILRALGQLMLFVDGMLGVVAHSDTIQWLYTLCASLSRLVVKTALKLLLVFVEYSENNAPLFIRAV 244 (339)
T ss_dssp HHHHHTTSCHHHHHHHHHHHHHHTTSHHHHHHHHHCHHHHHHHHHGGGCSCHHHHHHHHHHHHHHHHHCGGGHHHHHHHH
T ss_pred HHHHHHhcChHHHHHHHHHHHHHHhccccccchhCCHHHHHHHHHHHcCccHHHHHHHHHHHHHHHccCcccchHHHHHH
Confidence 33334445666777777777777665 11112455666777777888999889999998888765322 111111
Q ss_pred h--------hHHHHHHHHhc---CCCHHHHHHHHHHHHHHHHHhCchH-HHHHHHhccHHHHH-HHHHHHhc
Q 000156 444 K--------DYVPICMECLN---DGTPEVRDAAFSVLAAIAKSVGMRP-LERSIEKLDDVRRN-KLSEMIAG 502 (2015)
Q Consensus 444 ~--------~l~p~l~k~L~---Ds~~~VR~aA~~al~~l~~~~Ge~~-~~~~l~~Ld~~~~k-kI~e~~~~ 502 (2015)
+ .....+++.|. .++.++.-.|...+..+....+.+. +..+++.|...-+. .|...+++
T Consensus 245 ~~v~~~~~~~p~~~Lv~~L~~~~~~D~elq~~amtLIN~lL~~apd~d~~~di~d~Le~~gi~~~i~r~l~~ 316 (339)
T 3dad_A 245 NSVASTTGAPPWANLVSILEEKNGADPELLVYTVTLINKTLAALPDQDSFYDVTDALEQQGMEALVQRHLGT 316 (339)
T ss_dssp HHHHHHHCCCTTHHHHHHHTTTTSCCHHHHHHHHHHHHHHHHHCSSHHHHHHHHHHHHHTTHHHHHHHHHSC
T ss_pred HHhhhccCCCcHHHHHHHHhccCCCCHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHccHHHHHHHHHhc
Confidence 1 11346777786 7899999999999999988887644 67777777654443 34444543
No 146
>1upk_A MO25 protein; transferase, armadillo; HET: MSE; 1.85A {Homo sapiens} SCOP: a.118.1.15 PDB: 1upl_A 2wtk_A* 3gni_A*
Probab=40.83 E-value=1.2e+02 Score=36.16 Aligned_cols=118 Identities=14% Similarity=0.215 Sum_probs=87.6
Q ss_pred hhhhhhccCChHHHHHHHHHHHHHh-cCCCC----CCCChHHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHhhhc---c
Q 000156 289 GFWEGVKATKWSERKDAVAELTKLA-STKRI----APGDFTEVCRTLKKLITDVNIAVAVEAIQAIGNLARGLRTH---F 360 (2015)
Q Consensus 289 ~f~~~l~s~kWkeR~eaL~~L~~l~-~~~ki----~~~~y~~l~~~L~k~l~D~N~~V~~~A~~~l~~La~~L~~~---f 360 (2015)
.|++-+...+...=-+|...++.++ .++.+ ...+|..++..+.+.+...|....+.+++.|++|--. |.. +
T Consensus 168 ~fF~yv~~~~FdiasDAf~TfkelLt~Hk~lvaefL~~nyd~Ff~~y~~Ll~S~NYVTkRQSlKLLgelLld-r~N~~vM 246 (341)
T 1upk_A 168 DFFRYVEMSTFDIASDAFATFKDLLTRHKLLSAEFLEQHYDRFFSEYEKLLHSENYVTKRQSLKLLGELLLD-RHNFTIM 246 (341)
T ss_dssp HHHHHTTCSSHHHHHHHHHHHHHHHHSSHHHHHHHHHHTHHHHHHHHHHHTTCSSHHHHHHHHHHHHHHHHS-GGGHHHH
T ss_pred HHHHHhcCCCchHHHHHHHHHHHHHhccHHHHHHHHHHhHHHHHHHHHHHhcCCcchhHHHHHHHHHHHHhC-chHHHHH
Confidence 4666677888888889999998876 44433 3357999999999999999999999999999998632 222 2
Q ss_pred hhhh--HhHHHHHHHHhccCcHHHHHHHHHHHHHHHHhcCCChHhHHHHH
Q 000156 361 SGSS--RFLLPVLLEKLKEKKPTVAESLTQTLQAMHKAGCLNLVDVVEDV 408 (2015)
Q Consensus 361 ~~~~--~~llp~LL~klkdkk~~V~~aa~~aL~al~~~~~~~l~~il~~l 408 (2015)
..|+ ..-+..++..|+|+.++|+-.|......++.+ ......|...|
T Consensus 247 ~~Yis~~~nLkl~M~LL~d~sk~Iq~EAFhVFKvFVAN-P~K~~~I~~IL 295 (341)
T 1upk_A 247 TKYISKPENLKLMMNLLRDKSRNIQFEAFHVFKVFVAN-PNKTQPILDIL 295 (341)
T ss_dssp HHHTTCHHHHHHHHHHTTCSCHHHHHHHHHHHHHHHHC-SSCCHHHHHHH
T ss_pred HHHhCCHHHHHHHHHHhcCchhchhhhhhhheeeeeeC-CCCChHHHHHH
Confidence 3453 35677888888999999988888888888776 43444555544
No 147
>3d9j_A RNA-binding protein 16; SCAF8, RNA polymerase II CTD interacting domain, arm repeats phospho-CTD, phosphoprotein, transcription; 1.60A {Homo sapiens} PDB: 3d9k_A* 3d9l_A* 3d9m_A* 3d9n_A* 3d9p_A* 3d9i_A 3d9o_A* 2diw_A
Probab=40.31 E-value=1.1e+02 Score=31.83 Aligned_cols=114 Identities=11% Similarity=0.077 Sum_probs=66.9
Q ss_pred HHHHHhccCcHHHHHHHHHHHHHHHHhcCCChHhHHHHHHHHhhcCChHHHHHHHHHHHHHHHhcChh------HHHHh-
Q 000156 370 VLLEKLKEKKPTVAESLTQTLQAMHKAGCLNLVDVVEDVKTSVKNKVPLVRSLTLNWVTFCIETSSKA------AVLKV- 442 (2015)
Q Consensus 370 ~LL~klkdkk~~V~~aa~~aL~al~~~~~~~l~~il~~l~~~L~~Knp~vR~~~l~~L~~~l~~~~~~------~l~~~- 442 (2015)
..|+-|.+.++.+.....+.|..++..+.-.-..|+..+...+..-.|.-|...|=.+..++.++... .+.+.
T Consensus 9 ~~L~~L~~~k~~~S~~~I~~LT~~a~~~~~~~~~IV~~~~~~i~k~~~~~KL~~LYL~DsIvrn~~~k~~~~~~~f~~~F 88 (145)
T 3d9j_A 9 SELYSLNDYKPPISKAKMTQITKAAIKAIKFYKHVVQSVEKFIQKCKPEYKVPGLYVIDSIVRQSRHQFGQEKDVFAPRF 88 (145)
T ss_dssp HHHHGGGGSCSSCCHHHHHHHHHHHHHTGGGHHHHHHHHHHHHHHSCGGGHHHHHHHHHHHHHHHHHHHCTTTCSHHHHH
T ss_pred HHHHHHHhccCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCccceeehhhhhHHHHHHhhhhcCCccccHHHHH
Confidence 44556666664455555566666554412233567777777777667888887777777777665431 22222
Q ss_pred hhhHHHHHHHHhcCCCHHHHHHHHHHHHHHH--HHhCchHHHHH
Q 000156 443 HKDYVPICMECLNDGTPEVRDAAFSVLAAIA--KSVGMRPLERS 484 (2015)
Q Consensus 443 l~~l~p~l~k~L~Ds~~~VR~aA~~al~~l~--~~~Ge~~~~~~ 484 (2015)
.+.+.+.+..+. ...+++|..-.+.+.+.. .+|+.+.+.++
T Consensus 89 ~~~L~~~f~~~~-~~~~~~r~kl~rLl~iW~~r~vF~~~~l~~l 131 (145)
T 3d9j_A 89 SNNIISTFQNLY-RCPGDDKSKIVRVLNLWQKNNVFKSEIIQPL 131 (145)
T ss_dssp HHHHHHHHHHHT-SSCGGGHHHHHHHHHHHHHTTSSCHHHHHHH
T ss_pred HHHHHHHHHHHH-hCCHHHHHHHHHHHHHhcCCCCCCHHHHHHH
Confidence 233333343333 455899998888887765 45665544433
No 148
>2jak_A Serine/threonine-protein phosphatase 2A 56 kDa RE subunit gamma isoform; B56G, PP2A, PPP2R5C, phosphorylation; 2.60A {Homo sapiens} SCOP: a.118.1.20
Probab=40.16 E-value=1.6e+02 Score=35.95 Aligned_cols=185 Identities=14% Similarity=0.135 Sum_probs=113.2
Q ss_pred hhhhhccCChHHHHHHHHHHHHHhcCCCCCCCCh-----HHHHHHHHHHhc-ccCHHHHHHHHHHHHHHHHHhhhcchhh
Q 000156 290 FWEGVKATKWSERKDAVAELTKLASTKRIAPGDF-----TEVCRTLKKLIT-DVNIAVAVEAIQAIGNLARGLRTHFSGS 363 (2015)
Q Consensus 290 f~~~l~s~kWkeR~eaL~~L~~l~~~~ki~~~~y-----~~l~~~L~k~l~-D~N~~V~~~A~~~l~~La~~L~~~f~~~ 363 (2015)
+.+.+.+.+=+||.-.-.-|..+-. ++. ++ ..+-..+.+-+- +.+..-+.+.+.+++.+.+|.-..+...
T Consensus 179 Ll~lfdSeDpRERd~LktiLhrIY~--Kf~--~~R~~Irk~i~nif~~fiye~e~~~GIaeLLeilgsIIngfa~PLKee 254 (392)
T 2jak_A 179 LLELFDSEDPRERDFLKTTLHRIYG--KFL--GLRAYIRKQINNIFYRFIYETEHHNGIAELLEILGSIINGFALPLKEE 254 (392)
T ss_dssp HHHHTTCSCHHHHHHHHHHHHHHHH--HCG--GGHHHHHHHHHHHHHHHHTSSCCCSCHHHHHHHHHHHHHTCCSSCCHH
T ss_pred HHHHcCCCChHHHHHHHHHHHHHHH--HHH--HHHHHHHHHHHHHHHHHhhccCCCCCHHHHHHHHHHHHhccCCCCcHH
Confidence 3445688999998765555555421 000 11 112222333333 3444467788999999999876443323
Q ss_pred hH-hHHHHHHHHhccCcHH-HHHHHHHHHHHHHHhcCCChHhHHHHHHHHhhcCChHHHHHHHHHHHHHHHhcChhHHHH
Q 000156 364 SR-FLLPVLLEKLKEKKPT-VAESLTQTLQAMHKAGCLNLVDVVEDVKTSVKNKVPLVRSLTLNWVTFCIETSSKAAVLK 441 (2015)
Q Consensus 364 ~~-~llp~LL~klkdkk~~-V~~aa~~aL~al~~~~~~~l~~il~~l~~~L~~Knp~vR~~~l~~L~~~l~~~~~~~l~~ 441 (2015)
.+ -+...|+-..+-+.-. -......|+..++.+.+.-...++..|+...---|++=..--++.|..+++..++..+.+
T Consensus 255 hk~Fl~~vLlPLhk~~~l~~y~~qL~ycv~qf~eKDp~L~~~vi~~LLk~WP~tns~KevlFL~eleeiLe~~~~~~f~~ 334 (392)
T 2jak_A 255 HKIFLLKVLLPLHKVKSLSVYHPQLAYCVVQFLEKDSTLTEPVVMALLKYWPKTHSPKEVMFLNELEEILDVIEPSEFVK 334 (392)
T ss_dssp HHHHHHHTTGGGGTSGGGGGTHHHHHHHHHHHHHHCGGGHHHHHHHHHHSSCSSCCTTHHHHHHHHHHHHHTCCHHHHHH
T ss_pred HHHHHHHHhHhhccCCcHHHhHHHHHHHHHHHHhcCchhHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHhCCHHHHHH
Confidence 33 3455555555555433 355777888888876322223455555544443444333455788888999999888888
Q ss_pred hhhhHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhCchHHHHHH
Q 000156 442 VHKDYVPICMECLNDGTPEVRDAAFSVLAAIAKSVGMRPLERSI 485 (2015)
Q Consensus 442 ~l~~l~p~l~k~L~Ds~~~VR~aA~~al~~l~~~~Ge~~~~~~l 485 (2015)
....+...+.+|+...+-.|-+.|. ..+.++.+..++
T Consensus 335 i~~~lF~~la~ci~S~hfqVAErAL-------~~wnNe~i~~li 371 (392)
T 2jak_A 335 IMEPLFRQLAKCVSSPHFQVAERAL-------YYWNNEYIMSLI 371 (392)
T ss_dssp HHHHHHHHHHHHHTCSSHHHHHHHH-------GGGGCHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCcHHHHHHHH-------HHhCcHHHHHHH
Confidence 8999999999999999999966654 445555444333
No 149
>1lsh_A Lipovitellin (LV-1N, LV-1C); vitellogenin, lipoprotein, plasma apolipoprote apolipoprotein B, APOB; HET: PLD UPL; 1.90A {Ichthyomyzon unicuspis} SCOP: a.118.4.1 f.7.1.1 f.7.1.1
Probab=37.93 E-value=1.8e+02 Score=40.50 Aligned_cols=161 Identities=11% Similarity=0.087 Sum_probs=101.2
Q ss_pred ChHHHHHHHHHHHHHHHhcc--ccCCC-CChhhHHHHHHhccccchHHHHHHHHHHHHHHHHHhChhhHHhhhHHHHHHH
Q 000156 866 DWKVRLESIEAVNKILEEAN--KRIQP-AGTGELFGGLRGRLYDSNKNLVMATLITLGAVASAMGPAVEKSSKGVLSDIL 942 (2015)
Q Consensus 866 ~Wk~R~eale~L~~ll~~a~--~~I~~-~~~~eL~~~L~~rL~DsN~~V~~~Al~~l~~La~alg~~f~~~~~~llp~ll 942 (2015)
++..|..++-.+..++.... ....+ .....+...|...+...+..-...+|++||.+.. . ..++.+.
T Consensus 408 ~~~l~~ta~La~gslV~k~c~~~~~c~~~~v~~i~~~l~~~~~~~~~~~~~~~LkaLGN~g~----p------~~l~~l~ 477 (1056)
T 1lsh_A 408 RPILRKTAVLGYGSLVFRYCANTVSCPDELLQPLHDLLSQSSDRAKEEEIVLALKALGNAGQ----P------NSIKKIQ 477 (1056)
T ss_dssp CHHHHHHHHHHHHHHHHHHHTTCSSCCGGGTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTC----G------GGHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHhccCCCCCHHHHHHHHHHHHHHHhcCChHHHHHHHHHhhccCC----h------hHHHHHH
Confidence 56778889999999887521 11112 2234555555555655556566777777776542 1 2344444
Q ss_pred HHhC-------CCcHHHHHHHHHHHHHHHHhcCchhhHHHHHHHHhcCCCChhHHHHHHHHHHHHhccCCCCCChhhhHH
Q 000156 943 KCLG-------DNKKHMRECTLTVLDAWLAAVHLDKMVPYVTTALTDAKLGAEGRKDLFDWLSKQLTGLSGFPDAAHLLK 1015 (2015)
Q Consensus 943 ~~L~-------D~k~~Vr~aa~~aL~~i~~~~gl~~ll~~l~~~L~~~k~~p~~R~~~l~~L~~~l~~~~~~~~~~~ll~ 1015 (2015)
..+. +....||.+|+.+|..+... ....+-+.+...+.|...++++|..++..|.+.- +. ..++.
T Consensus 478 ~~l~~~~~~~~~~~~rvr~aAi~ALr~~~~~-~p~~v~~il~~i~~n~~e~~EvRiaA~~~Lm~t~------P~-~~~l~ 549 (1056)
T 1lsh_A 478 RFLPGQGKSLDEYSTRVQAEAIMALRNIAKR-DPRKVQEIVLPIFLNVAIKSELRIRSCIVFFESK------PS-VALVS 549 (1056)
T ss_dssp TTSTTSSSCCCCSCHHHHHHHHHTTTTGGGT-CHHHHHHHHHHHHHCTTSCHHHHHHHHHHHHHTC------CC-HHHHH
T ss_pred HhhcCccccccccchHHHHHHHHHHHHhhhh-chHHHHHHHHHHhcCCCCChHHHHHHHHHHHHHC------cC-HHHHH
Confidence 4442 12346889999999888632 2245667788888766567999999888876521 12 33444
Q ss_pred HHHhhc-CCCChHHHHHHHHHHHHHHHHcC
Q 000156 1016 PASIAM-TDKSSDVRKAAEACIVEILRAGG 1044 (2015)
Q Consensus 1016 pl~~~L-~D~~~~VR~aA~~~L~~l~~~~G 1044 (2015)
-+...+ .|++..|+......|..+...-.
T Consensus 550 ~ia~~l~~E~~~QV~sfv~S~l~sla~s~~ 579 (1056)
T 1lsh_A 550 MVAVRLRREPNLQVASFVYSQMRSLSRSSN 579 (1056)
T ss_dssp HHHHHHTTCSCHHHHHHHHHHHHHHTTCCS
T ss_pred HHHHHHhhCchHHHHHHHHHHHHHHHhcCC
Confidence 455544 78999999988887776655443
No 150
>1w9c_A CRM1 protein, exportin 1; nuclear protein, nuclear export complex; 2.3A {Homo sapiens} SCOP: a.118.1.19
Probab=35.80 E-value=4.3e+02 Score=31.23 Aligned_cols=64 Identities=13% Similarity=0.087 Sum_probs=54.3
Q ss_pred cCChHHHHHHHHHHHHHHHhcChhHHH---HhhhhHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhC
Q 000156 414 NKVPLVRSLTLNWVTFCIETSSKAAVL---KVHKDYVPICMECLNDGTPEVRDAAFSVLAAIAKSVG 477 (2015)
Q Consensus 414 ~Knp~vR~~~l~~L~~~l~~~~~~~l~---~~l~~l~p~l~k~L~Ds~~~VR~aA~~al~~l~~~~G 477 (2015)
+..|.-|.+-..+|..+..+|-...+. ...+.++..++=+..++..+|-+.+..++-.+.+-+.
T Consensus 133 ~eyPehR~~Ff~LL~ai~~~cF~al~~lp~~~fklvidsiiWa~kH~~r~V~e~gL~il~~ll~n~~ 199 (321)
T 1w9c_A 133 EEYPEHRTNFFLLLQAVNSHCFPAFLAIPPTQFKLVLDSIIWAFKHTMRNVADTGLQILFTLLQNVA 199 (321)
T ss_dssp TCSHHHHHHHHHHHHHHHHHCTTHHHHSCHHHHHHHHHHHHHHTTCSSHHHHHHHHHHHHHHHHHHH
T ss_pred ccChHHHHHHHHHHHHHHHHhHHHHHcCCHHHHHHHHHHHHHHcCCCCchHHHHHHHHHHHHHHHHh
Confidence 467999999999999999888665432 4568899999999999999999999999988887774
No 151
>2npp_B PP2A, B subunit, serine/threonine-protein phosphatase 2A 56 kDa RE subunit gamma isoform; heat repeat, signaling protein, hydrolase-hydrolase inhibito; HET: 1ZN; 3.30A {Homo sapiens} SCOP: a.118.1.20
Probab=34.21 E-value=2.5e+02 Score=34.82 Aligned_cols=186 Identities=14% Similarity=0.125 Sum_probs=113.0
Q ss_pred hhhhhccCChHHHHHHHHHHHHHhcCCCCCCCChH-----HHHHHHHHHhc-ccCHHHHHHHHHHHHHHHHHhhhcch-h
Q 000156 290 FWEGVKATKWSERKDAVAELTKLASTKRIAPGDFT-----EVCRTLKKLIT-DVNIAVAVEAIQAIGNLARGLRTHFS-G 362 (2015)
Q Consensus 290 f~~~l~s~kWkeR~eaL~~L~~l~~~~ki~~~~y~-----~l~~~L~k~l~-D~N~~V~~~A~~~l~~La~~L~~~f~-~ 362 (2015)
+.+.+.+.+=+||.-.-.-|..+-. ++. ++. .+-..+..-+- ..+..-+.+.+.+++.+.+|.--.+. -
T Consensus 167 Ll~lfdSeDpRERd~LktiLhrIY~--Kf~--~~R~~Irk~i~nif~~fi~e~e~~nGIaeLLeilgSIinGfa~PLKee 242 (449)
T 2npp_B 167 LLELFDSEDPRERDFLKTTLHRIYG--KFL--GLRAYIRKQINNIFYRFIYETEHHNGIAELLEILGSIINGFALPLKEE 242 (449)
T ss_dssp HHHTTTSSTHHHHHHHHHHHHHHHH--SCT--TTHHHHHHHHHHHHHHHHHTCSCCSCHHHHHHHHHHHHSSCCSSCCHH
T ss_pred HHHHcCCCChHHHHHHHHHHHHHHH--HHH--HHHHHHHHHHHHHHHHHhcccCCCCCHHHHHHHHHHHHhccCCCCcHH
Confidence 3445688999998765555655532 111 111 12222222222 33334567778888888888654433 2
Q ss_pred hhHhHHHHHHHHhccCcHH-HHHHHHHHHHHHHHhcCCChHhHHHHHHHHhhcCChHHHHHHHHHHHHHHHhcChhHHHH
Q 000156 363 SSRFLLPVLLEKLKEKKPT-VAESLTQTLQAMHKAGCLNLVDVVEDVKTSVKNKVPLVRSLTLNWVTFCIETSSKAAVLK 441 (2015)
Q Consensus 363 ~~~~llp~LL~klkdkk~~-V~~aa~~aL~al~~~~~~~l~~il~~l~~~L~~Knp~vR~~~l~~L~~~l~~~~~~~l~~ 441 (2015)
+..-+...|+-..+-+.-. -......|+..++.+.+.-...++..|+...---|++=-.--++.|..+++..++..+.+
T Consensus 243 hk~fl~~vLlPLhk~~~l~~y~~qL~ycv~qf~eKDp~L~~~vi~~LLk~WP~tns~KevlFL~eleeile~~~~~ef~~ 322 (449)
T 2npp_B 243 HKIFLLKVLLPLHKVKSLSVYHPQLAYCVVQFLEKDSTLTEPVVMALLKYWPKTHSPKEVMFLNELEEILDVIEPSEFVK 322 (449)
T ss_dssp HHHHHHHTTGGGGGSSCGGGTHHHHHHHHHHHHHHCGGGHHHHHHHHHHTCCSSCHHHHHHHHHHHHHHHTTCCHHHHHH
T ss_pred HHHHHHHHHHHHHccchhHHhHHHHHHHHHHHHhcCcHhHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHhCCHHHHHH
Confidence 3334455556566655433 356777888888877322223455555544444554433455677888888888888888
Q ss_pred hhhhHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhCchHHHHHHH
Q 000156 442 VHKDYVPICMECLNDGTPEVRDAAFSVLAAIAKSVGMRPLERSIE 486 (2015)
Q Consensus 442 ~l~~l~p~l~k~L~Ds~~~VR~aA~~al~~l~~~~Ge~~~~~~l~ 486 (2015)
....+...+.+|+...+-.|-+.|. ..+.++.+..++.
T Consensus 323 i~~~lF~~la~ci~S~hfqVAErAL-------~~w~N~~i~~li~ 360 (449)
T 2npp_B 323 IMEPLFRQLAKCVSSPHFQVAERAL-------YYWNNEYIMSLIS 360 (449)
T ss_dssp HHHHHHHHHHHHHTCSCHHHHHHHH-------GGGGCHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCHHHHHHHH-------HHHCCHHHHHHHH
Confidence 8899999999999999999966654 3455554444443
No 152
>3eg5_B Protein diaphanous homolog 1; protein-protein complex, RHO proteins, formins, armadillo repeat, G-protein, GTPase, alternative splicing; HET: GNP; 2.70A {Mus musculus} SCOP: a.118.1.23 PDB: 1z2c_B*
Probab=29.65 E-value=2.7e+02 Score=33.85 Aligned_cols=51 Identities=8% Similarity=0.036 Sum_probs=38.0
Q ss_pred HHHHHHHHHHHHHHHhcCCCh------HhHHHHHHHHhhcCChHHHHHHHHHHHHHHH
Q 000156 381 TVAESLTQTLQAMHKAGCLNL------VDVVEDVKTSVKNKVPLVRSLTLNWVTFCIE 432 (2015)
Q Consensus 381 ~V~~aa~~aL~al~~~~~~~l------~~il~~l~~~L~~Knp~vR~~~l~~L~~~l~ 432 (2015)
.+...+..||.+++.+ ..++ +..+..|..++.++++.+|..+++.|+.+..
T Consensus 135 ~~q~~~l~CLkalmN~-~~G~~~vl~~~~~i~~l~~~L~s~~~~~~~~aleLL~~lc~ 191 (383)
T 3eg5_B 135 RNQHEIIRCLKAFMNN-KFGIKTMLETEEGILLLVRAMDPAVPNMMIDAAKLLSALCI 191 (383)
T ss_dssp HHHHHHHHHHHHHTSS-HHHHHHHHTCSSHHHHHHHTCCTTSHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHhcc-hhhHHHHHcChHHHHHHHHHhCCCchHHHHHHHHHHHHHHh
Confidence 5566778888888765 2223 2456778888999999999999999976443
No 153
>1ho8_A Vacuolar ATP synthase subunit H; heat repeat, hydrolase; 2.95A {Saccharomyces cerevisiae} SCOP: a.118.1.9
Probab=29.24 E-value=1.2e+02 Score=37.87 Aligned_cols=59 Identities=22% Similarity=0.192 Sum_probs=43.8
Q ss_pred CChHHHHHHHHHHHHHHHhcChhH--HHHhhhhHHHHHHHHhcCCCHHHHHHHHHHHHHHHHH
Q 000156 415 KVPLVRSLTLNWVTFCIETSSKAA--VLKVHKDYVPICMECLNDGTPEVRDAAFSVLAAIAKS 475 (2015)
Q Consensus 415 Knp~vR~~~l~~L~~~l~~~~~~~--l~~~l~~l~p~l~k~L~Ds~~~VR~aA~~al~~l~~~ 475 (2015)
.+|.+-.=+|.=++.++..+|... +.+ + -.-..++++|++.|++||..|..|+..+|.+
T Consensus 417 ~d~~~laVAc~Digefvr~~P~gr~i~~~-l-g~K~~VM~Lm~h~d~~Vr~~AL~avQklm~~ 477 (480)
T 1ho8_A 417 QEKIIIQVALNDITHVVELLPESIDVLDK-T-GGKADIMELLNHSDSRVKYEALKATQAIIGY 477 (480)
T ss_dssp HHHHHHHHHHHHHHHHHHHCTTHHHHHHH-H-SHHHHHHHHTSCSSHHHHHHHHHHHHHHHHH
T ss_pred CCcceEEeecccHHHHHHHCcchhHHHHH-c-CcHHHHHHHhcCCCHHHHHHHHHHHHHHHHh
Confidence 357777777788888888776432 222 1 1345789999999999999999999998864
No 154
>1lsh_A Lipovitellin (LV-1N, LV-1C); vitellogenin, lipoprotein, plasma apolipoprote apolipoprotein B, APOB; HET: PLD UPL; 1.90A {Ichthyomyzon unicuspis} SCOP: a.118.4.1 f.7.1.1 f.7.1.1
Probab=27.09 E-value=4.3e+02 Score=36.66 Aligned_cols=157 Identities=17% Similarity=0.109 Sum_probs=98.7
Q ss_pred CChHHHHHHHHHHHHHhc----CCCCCC-CChHHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHhhhcchhhhHhHHHHH
Q 000156 297 TKWSERKDAVAELTKLAS----TKRIAP-GDFTEVCRTLKKLITDVNIAVAVEAIQAIGNLARGLRTHFSGSSRFLLPVL 371 (2015)
Q Consensus 297 ~kWkeR~eaL~~L~~l~~----~~ki~~-~~y~~l~~~L~k~l~D~N~~V~~~A~~~l~~La~~L~~~f~~~~~~llp~L 371 (2015)
.++..|..++-.+..++. .....+ .....+...|.+.+...+......++++||.++. ...++.|
T Consensus 407 ~~~~l~~ta~La~gslV~k~c~~~~~c~~~~v~~i~~~l~~~~~~~~~~~~~~~LkaLGN~g~----------p~~l~~l 476 (1056)
T 1lsh_A 407 NRPILRKTAVLGYGSLVFRYCANTVSCPDELLQPLHDLLSQSSDRAKEEEIVLALKALGNAGQ----------PNSIKKI 476 (1056)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHTTCSSCCGGGTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTC----------GGGHHHH
T ss_pred cCHHHHHHHHHHHHHHHHHHhccCCCCCHHHHHHHHHHHHHHHhcCChHHHHHHHHHhhccCC----------hhHHHHH
Confidence 566778888888877763 211212 2346677777777776566677888888888753 1234444
Q ss_pred HHHhc-------cCcHHHHHHHHHHHHHHHHhcCCChHhHHHHHHHHhh--cCChHHHHHHHHHHHHHHHhcChhHHHHh
Q 000156 372 LEKLK-------EKKPTVAESLTQTLQAMHKAGCLNLVDVVEDVKTSVK--NKVPLVRSLTLNWVTFCIETSSKAAVLKV 442 (2015)
Q Consensus 372 L~klk-------dkk~~V~~aa~~aL~al~~~~~~~l~~il~~l~~~L~--~Knp~vR~~~l~~L~~~l~~~~~~~l~~~ 442 (2015)
.+.+. +....|+.+|..||+.+.. .....+-+.++.... ...+.+|..++..| +...+....
T Consensus 477 ~~~l~~~~~~~~~~~~rvr~aAi~ALr~~~~---~~p~~v~~il~~i~~n~~e~~EvRiaA~~~L---m~t~P~~~~--- 547 (1056)
T 1lsh_A 477 QRFLPGQGKSLDEYSTRVQAEAIMALRNIAK---RDPRKVQEIVLPIFLNVAIKSELRIRSCIVF---FESKPSVAL--- 547 (1056)
T ss_dssp HTTSTTSSSCCCCSCHHHHHHHHHTTTTGGG---TCHHHHHHHHHHHHHCTTSCHHHHHHHHHHH---HHTCCCHHH---
T ss_pred HHhhcCccccccccchHHHHHHHHHHHHhhh---hchHHHHHHHHHHhcCCCCChHHHHHHHHHH---HHHCcCHHH---
Confidence 33331 2245688888888887753 445566677777664 56689999988776 443443222
Q ss_pred hhhHHHHHHHHhcCCCHHHHHHHHHHHHHHHHH
Q 000156 443 HKDYVPICMECLNDGTPEVRDAAFSVLAAIAKS 475 (2015)
Q Consensus 443 l~~l~p~l~k~L~Ds~~~VR~aA~~al~~l~~~ 475 (2015)
+......+-.|.+..|+..-...|-.+.+.
T Consensus 548 ---l~~ia~~l~~E~~~QV~sfv~S~l~sla~s 577 (1056)
T 1lsh_A 548 ---VSMVAVRLRREPNLQVASFVYSQMRSLSRS 577 (1056)
T ss_dssp ---HHHHHHHHTTCSCHHHHHHHHHHHHHHTTC
T ss_pred ---HHHHHHHHhhCchHHHHHHHHHHHHHHHhc
Confidence 122222334679999998888887666654
No 155
>4fu3_A Regulation of nuclear PRE-mRNA domain-containing 1B; structural genomics consortium, SGC, domain swapping, transc; HET: MSE; 1.90A {Homo sapiens} PDB: 4fld_A*
Probab=26.03 E-value=2e+02 Score=29.25 Aligned_cols=66 Identities=14% Similarity=0.023 Sum_probs=44.5
Q ss_pred hHhHHHHHHHHhccCcHHHHHHHHHHHHHHHHhcCCChHhHHHHHHHHhhcCChHHHHHHHHHHHHHHHhc
Q 000156 364 SRFLLPVLLEKLKEKKPTVAESLTQTLQAMHKAGCLNLVDVVEDVKTSVKNKVPLVRSLTLNWVTFCIETS 434 (2015)
Q Consensus 364 ~~~llp~LL~klkdkk~~V~~aa~~aL~al~~~~~~~l~~il~~l~~~L~~Knp~vR~~~l~~L~~~l~~~ 434 (2015)
-+..+-..|..|..++..+.....=|+. | ....+.|++.+...++.-.+.-|...+=.+..++.++
T Consensus 5 ~~~~l~~~L~~L~~s~~sI~~~s~w~l~----~-~~~a~~iv~~i~~~l~~~~~~~KL~~LYLindIl~ns 70 (135)
T 4fu3_A 5 SESALEKKLSELSNSQQSVQTLSLWLIH----H-RKHAGPIVSVWHRELRKAKSNRKLTFLYLANDVIQNS 70 (135)
T ss_dssp CHHHHHHHHHHCCSSTTHHHHHHHHHHH----T-GGGHHHHHHHHHHHHHHSCTTTHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHccccHHHHHHHHHHHHH----H-HHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHH
Confidence 3456667778888887777765544444 3 3345678888888887766777777776666666655
No 156
>1ho8_A Vacuolar ATP synthase subunit H; heat repeat, hydrolase; 2.95A {Saccharomyces cerevisiae} SCOP: a.118.1.9
Probab=25.14 E-value=2e+02 Score=35.93 Aligned_cols=79 Identities=14% Similarity=0.151 Sum_probs=56.4
Q ss_pred ccCCCCChhhHHHHHHhccc----------cchHHHHHHHHHHHHHHHHHhChhhHHhhhH--HHHHHHHHhCCCcHHHH
Q 000156 886 KRIQPAGTGELFGGLRGRLY----------DSNKNLVMATLITLGAVASAMGPAVEKSSKG--VLSDILKCLGDNKKHMR 953 (2015)
Q Consensus 886 ~~I~~~~~~eL~~~L~~rL~----------DsN~~V~~~Al~~l~~La~alg~~f~~~~~~--llp~ll~~L~D~k~~Vr 953 (2015)
.++..++ .+++..|.+.|. ..++.+..-||+-||+++.....+ +..+.. .=..+++.+.+.++.||
T Consensus 387 ~kf~e~~-~~llk~L~~iL~~~~~~~~~~~s~d~~~laVAc~Digefvr~~P~g-r~i~~~lg~K~~VM~Lm~h~d~~Vr 464 (480)
T 1ho8_A 387 DEFKKDN-YKIFRQLIELLQAKVRNGDVNAKQEKIIIQVALNDITHVVELLPES-IDVLDKTGGKADIMELLNHSDSRVK 464 (480)
T ss_dssp GGGSSGG-GHHHHHHHHHHHHHHHTTCCCSHHHHHHHHHHHHHHHHHHHHCTTH-HHHHHHHSHHHHHHHHTSCSSHHHH
T ss_pred HHHHhcc-hHHHHHHHHHHhhhccccccccCCCcceEEeecccHHHHHHHCcch-hHHHHHcCcHHHHHHHhcCCCHHHH
Confidence 3444454 677777777774 246888999999999999877433 222222 23466788899999999
Q ss_pred HHHHHHHHHHHHh
Q 000156 954 ECTLTVLDAWLAA 966 (2015)
Q Consensus 954 ~aa~~aL~~i~~~ 966 (2015)
..|..|+..|+.+
T Consensus 465 ~~AL~avQklm~~ 477 (480)
T 1ho8_A 465 YEALKATQAIIGY 477 (480)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh
Confidence 9999999888754
No 157
>1c7c_A Protein (deoxyhemoglobin (alpha chain)); heme, oxygen delivery vehicle, blood substitute, oxygen storage/transport complex; HET: HEM; 1.80A {Homo sapiens} SCOP: a.1.1.2 a.1.1.2 PDB: 1aby_A* 1abw_A* 1o1p_A* 1c7d_A* 1o1j_A* 1o1l_A* 1o1n_A* 1o1m_A*
Probab=24.63 E-value=8.3e+02 Score=27.94 Aligned_cols=41 Identities=15% Similarity=0.101 Sum_probs=27.6
Q ss_pred hHHHHhhhhHHHHHHHHhc-CCCHHHHHHHHHHHHHHHHHhC
Q 000156 437 AAVLKVHKDYVPICMECLN-DGTPEVRDAAFSVLAAIAKSVG 477 (2015)
Q Consensus 437 ~~l~~~l~~l~p~l~k~L~-Ds~~~VR~aA~~al~~l~~~~G 477 (2015)
..+.-.-..++..|...+. +-+++|.+|=.++++.+...+.
T Consensus 238 ~~f~~~~~~ll~~l~~~lg~~~t~e~~~AW~~~~~~va~~l~ 279 (283)
T 1c7c_A 238 VNFKLLSHCLLVTLAAHLPAEFTPAVHASLDKFLASVSTVLT 279 (283)
T ss_dssp HHHHHHHHHHHHHHHHHCTTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHH
Confidence 3343333455666666665 6788899998888888877654
No 158
>2km4_A Regulator of TY1 transposition protein 103; CTD-interacting domain, RNA polymerase II binding protein, phosphoprotein; NMR {Saccharomyces cerevisiae} PDB: 2l0i_A*
Probab=23.24 E-value=2.7e+02 Score=28.75 Aligned_cols=110 Identities=8% Similarity=0.019 Sum_probs=60.4
Q ss_pred HhHHHHHHHHhccCcHHHHHHHHHHHHHHHHhcCCChHhHHHHHHHHhhcC--ChHHHHHHHHHHHHHHHhcCh---hHH
Q 000156 365 RFLLPVLLEKLKEKKPTVAESLTQTLQAMHKAGCLNLVDVVEDVKTSVKNK--VPLVRSLTLNWVTFCIETSSK---AAV 439 (2015)
Q Consensus 365 ~~llp~LL~klkdkk~~V~~aa~~aL~al~~~~~~~l~~il~~l~~~L~~K--np~vR~~~l~~L~~~l~~~~~---~~l 439 (2015)
+.-+-..|..|.+++..|..+..=| +.+ ....+.+++.+...+... ++.-|...+=.+..++.++.. ..+
T Consensus 5 ~~~l~~kL~~L~~sq~sIq~~s~W~----l~h-~~~a~~iv~~~~~~l~~~~~~~~kKL~~lYL~NDVlqnsk~k~~~~f 79 (142)
T 2km4_A 5 SEQFTTKLNTLEDSQESISSASKWL----LLQ-YRDAPKVAEMWKEYMLRPSVNTRRKLLGLYLMNHVVQQAKGQKIIQF 79 (142)
T ss_dssp HHHHHHHHHTCCSCHHHHHHHHHHH----HTC-GGGHHHHHHHHHHHHTSSSSCHHHHHHHHHHHHHHHHHHGGGTCCHH
T ss_pred HHHHHHHHHhccccHHHHHHHHHHH----HHh-hhhHHHHHHHHHHHHHhcCCCccceehhhhhHHHHHHHHhhcCchHH
Confidence 4455566777777776665433322 233 334567777777777765 556666655555556665432 122
Q ss_pred HHhh-hhHHHHHHHHhcCCCHHHHHHHHHHHHHHH--HHhCch
Q 000156 440 LKVH-KDYVPICMECLNDGTPEVRDAAFSVLAAIA--KSVGMR 479 (2015)
Q Consensus 440 ~~~l-~~l~p~l~k~L~Ds~~~VR~aA~~al~~l~--~~~Ge~ 479 (2015)
...+ +.+.+++.......++++|....+++...- .+++.+
T Consensus 80 ~~~F~~~L~~~~~~~~~~~~~~~~~kv~rvl~iWeer~vf~~~ 122 (142)
T 2km4_A 80 QDSFGKVAAEVLGRINQEFPRDLKKKLSRVVNILKERNIFSKQ 122 (142)
T ss_dssp HHHHHHTHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTCSCHH
T ss_pred HHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhccCCcCHH
Confidence 2222 222223333334457888888888776663 345544
No 159
>2rg8_A Programmed cell death protein 4; MA3 domain, heat repeats, anti-oncogene, apoptosis, cell cycle, cytoplasm, nucleus, phosphorylation, polymorphism; 1.80A {Homo sapiens} PDB: 2kzt_A
Probab=22.07 E-value=2.5e+02 Score=29.92 Aligned_cols=85 Identities=12% Similarity=0.123 Sum_probs=61.5
Q ss_pred HHHHHHHHHHHHHHhhhcchhhhHhHHHHHHHHhccCcHHHHHHHHHHHHHHHHhcCCChHhHH---HHHHHHhh---cC
Q 000156 342 AVEAIQAIGNLARGLRTHFSGSSRFLLPVLLEKLKEKKPTVAESLTQTLQAMHKAGCLNLVDVV---EDVKTSVK---NK 415 (2015)
Q Consensus 342 ~~~A~~~l~~La~~L~~~f~~~~~~llp~LL~klkdkk~~V~~aa~~aL~al~~~~~~~l~~il---~~l~~~L~---~K 415 (2015)
..+|+.|+..|.. ..|...++..++..-=|+|..-|+.+...|..++.. ..+.+++. ..++..+. -.
T Consensus 26 ~~Ea~~~l~eL~~------p~~~~~~V~~~I~~aldrk~~ere~~s~LL~~L~~~-~ls~~~i~~Gf~~lle~ldDl~iD 98 (165)
T 2rg8_A 26 TNEVAEMLRDLNL------GEMKSGVPVLAVSLALEGKASHREMTSKLLSDLCGT-VMSTTDVEKSFDKLLKDLPELALD 98 (165)
T ss_dssp HHHHHHHHHHHTC------SGGGGHHHHHHHHHHHTSCHHHHHHHHHHHHHHBTT-TBCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCC------cccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHC-CCCHHHHHHHHHHHHHhChhhccc
Confidence 3567778877641 235666777777777788999999999999988653 56666664 44445544 36
Q ss_pred ChHHHHHHHHHHHHHHHh
Q 000156 416 VPLVRSLTLNWVTFCIET 433 (2015)
Q Consensus 416 np~vR~~~l~~L~~~l~~ 433 (2015)
.|.+......|+++++..
T Consensus 99 iP~a~~~la~fiarav~d 116 (165)
T 2rg8_A 99 TPRAPQLVGQFIARAVGD 116 (165)
T ss_dssp CTTHHHHHHHHHHHHHHT
T ss_pred ccchHHHHHHHHHHHHHc
Confidence 799999999999998864
No 160
>2nsz_A Programmed cell death protein 4; PDCD4, tumor suppressor, translation, antitumor protein; 1.15A {Mus musculus} SCOP: a.118.1.14 PDB: 2kzt_B 2hm8_A 2ggf_A
Probab=21.47 E-value=4e+02 Score=27.00 Aligned_cols=86 Identities=14% Similarity=0.178 Sum_probs=58.7
Q ss_pred HHHHHHHHHHHHHHhhhcchhhhHhHHHHHHHHhccCc-HHHHHHHHHHHHHHHHhcCCChHhHHH---HHHHHhh---c
Q 000156 342 AVEAIQAIGNLARGLRTHFSGSSRFLLPVLLEKLKEKK-PTVAESLTQTLQAMHKAGCLNLVDVVE---DVKTSVK---N 414 (2015)
Q Consensus 342 ~~~A~~~l~~La~~L~~~f~~~~~~llp~LL~klkdkk-~~V~~aa~~aL~al~~~~~~~l~~il~---~l~~~L~---~ 414 (2015)
..+|++|+..|.. + .|...++..++...=|++ ...++.+...|..++..+-.+.+++.. .++..+. -
T Consensus 23 ~~Ea~~cl~eL~~---p---~f~~e~V~~~i~~alE~~~~~~~e~~~~LL~~L~~~~~is~~q~~~Gf~~v~~~l~Dl~l 96 (129)
T 2nsz_A 23 ISEAEHCLKELEV---P---HFHHELVYEAIVMVLESTGESAFKMILDLLKSLWKSSTITIDQMKRGYERIYNEIPDINL 96 (129)
T ss_dssp HHHHHHHHHHHTC---G---GGHHHHHHHHHHHHHHCCSSHHHHHHHHHHHHHHHTTCSCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCC---C---ccHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHCCCcCHHHHHHHHHHHHhhChHhhc
Confidence 4688899988751 2 234455555555555665 477888989998888654566666643 4444444 3
Q ss_pred CChHHHHHHHHHHHHHHHh
Q 000156 415 KVPLVRSLTLNWVTFCIET 433 (2015)
Q Consensus 415 Knp~vR~~~l~~L~~~l~~ 433 (2015)
..|........|+++++..
T Consensus 97 DiP~a~~~l~~~v~~ai~~ 115 (129)
T 2nsz_A 97 DVPHSYSVLERFVEECFQA 115 (129)
T ss_dssp HSTTHHHHHHHHHHHHHHT
T ss_pred CccchHHHHHHHHHHHHHC
Confidence 6799999999999988764
No 161
>2ion_A PDCD4, programmed cell death 4, PDCD4; alpha-helical, antitumor protein; 1.57A {Mus musculus} SCOP: a.118.1.14 PDB: 2ios_A 2iol_A
Probab=20.88 E-value=3.9e+02 Score=27.98 Aligned_cols=86 Identities=15% Similarity=0.190 Sum_probs=58.1
Q ss_pred HHHHHHHHHHHHHHhhhcchhhhHhHHHHHHHHhccCc-HHHHHHHHHHHHHHHHhcCCChHhHH---HHHHHHhh---c
Q 000156 342 AVEAIQAIGNLARGLRTHFSGSSRFLLPVLLEKLKEKK-PTVAESLTQTLQAMHKAGCLNLVDVV---EDVKTSVK---N 414 (2015)
Q Consensus 342 ~~~A~~~l~~La~~L~~~f~~~~~~llp~LL~klkdkk-~~V~~aa~~aL~al~~~~~~~l~~il---~~l~~~L~---~ 414 (2015)
..+|+.|+..|.. + .|...++..++...=|++ ...++.+...|..++..+..+.+++. ..++..+. -
T Consensus 25 ~~EA~~cl~EL~~---p---~f~~e~V~~~i~~alE~~~~~~re~~~~LL~~L~~~~~is~~q~~~Gf~~vl~~ldDl~l 98 (152)
T 2ion_A 25 ISEAEHCLKELEV---P---HFHHELVYEAIVMVLESTGESAFKMILDLLKSLWKSSTITIDQMKRGYERIYNEIPDINL 98 (152)
T ss_dssp HHHHHHHHHHHTC---G---GGHHHHHHHHHHHHHHCCSSHHHHHHHHHHHHHHHTTCSCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCC---C---cchHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHCCCcCHHHHHHHHHHHHHhChHhcc
Confidence 4688899988742 2 233455555555555554 67788898999888866456666664 34444444 3
Q ss_pred CChHHHHHHHHHHHHHHHh
Q 000156 415 KVPLVRSLTLNWVTFCIET 433 (2015)
Q Consensus 415 Knp~vR~~~l~~L~~~l~~ 433 (2015)
..|........|+.+++..
T Consensus 99 DiP~A~~~la~~v~~ai~~ 117 (152)
T 2ion_A 99 DVPHSYSVLERFVEECFQA 117 (152)
T ss_dssp HSTTHHHHHHHHHHHHHHT
T ss_pred CccchHHHHHHHHHHHHHC
Confidence 6788998888998888764
No 162
>1sz9_A PCF11 protein; RNA polymerase II CTD interacting domain, arm repeats, transcription; 2.10A {Saccharomyces cerevisiae} SCOP: a.118.9.4 PDB: 1sza_A* 2bf0_X
Probab=20.88 E-value=5e+02 Score=26.82 Aligned_cols=66 Identities=17% Similarity=0.194 Sum_probs=45.1
Q ss_pred hhhhhHHHHHHHHhhcCChhhHHHHHHHHHHHHHHhCCCCcChhHHHhhhhhhh----cCCChhHHHHHHHH
Q 000156 124 EAVDVFLDVMEKAIKNKVAKAVVPAIDVMFQALSEFGAKIIPPKRILKMLPELF----DHQDQNVRASSKGL 191 (2015)
Q Consensus 124 ~~~~~v~~~L~~~~~~KnpKv~~~~l~~L~~~l~~fG~~~i~~k~il~~l~~ll----~~~d~~VR~~a~~l 191 (2015)
...+.|++.+.+-+..-+|......|-.+..++++.|... ...|-+.|+++| ...|..+|..-..+
T Consensus 39 ~~a~~Iv~~i~~~i~k~~p~~KL~~LYL~DsIvkN~g~~y--~~~F~~~l~~~f~~~~~~~d~~~r~k~~rL 108 (144)
T 1sz9_A 39 SCAQYFVDAIESRIEKCMPKQKLYAFYALDSICKNVGSPY--TIYFSRNLFNLYKRTYLLVDNTTRTKLINM 108 (144)
T ss_dssp GGHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTCTTH--HHHHHTTHHHHHHHHHHTSCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccCCHhhHHHHHHHHHHHHHhccchH--HHHHHHHHHHHHHHHHHhCCHHHHHHHHHH
Confidence 3467888888888888899999999999999999999632 122333344443 33455555554333
Done!