Your job contains 1 sequence.
>000160
MLDQASRGEKKLKEEEQRLRKVAVNISKDVKKFWMKIEKLVLYKHQMEVDVRKKKALDKQ
LEFLLGQTERYSSMLAENLVDSHKPVQQSPMREQPGIQYKEADENGAEEPGVQSKEADED
DAEQHSGFEPQLDAADIDEEYDVHSEDESEDDEHTIEEDEALITEEERKEELEALHNETD
IPLQELLKRYAVDKVGRESSAEMGEDEAEPTVVEEGHVQGNGNDLLAGSKLDTSGSLVRR
CDEINGGLSISENHLLDIETSQVRDTSKKSGASTQKQALYDFSDEQEDGDFVVATGEDKD
DETTLSEEEELAKADSNNYIDEIALLQKESEIPVEELLARYRKDMKINKISEDESDYASA
LSDDLSDSPAHEDGELKLENDFMDGNVDPGASQLVMLPLTEKQEGGSEKKSEEGRESENR
IADAAAAARSAQPTGITFSTTQVRTKFPFLLKFPLREYQHIGLDWLVTMYEKRLNGILAD
EMGLGKTIMTIAMLAHLACEKGIWGPHLIVVPTSVMLNWETEFLKWCPAFKILTYFGSAK
ERKFKRQGWLKPNSFHVCITTYRLIIQDSKVFKRKKWKYLILDEAHLIKNWKSQRWQTLL
NFNSKRRILLTGTPLQNDLMELWSLMHFLMPHIFQSHQEFKDWFCNPISGMVEGQEKVNK
EVVDRLHNVLRPFILRRLKRDVEKQLPMKQEHVIYCRLSKRQRNLYEDFIASSETQATLA
SANFFGMISVIMQLRKVCNHPDLFEGRPIVSSFDMSGIDSQLSSSVCSMLSPSPLSTADL
KGLGLLFTNLDFSMNSWESDELNAIATPASLIKERADLNNLEEVGPFCTHRKRLNGTSIF
EKIRKALLEERRREAQDRASSVAWWNSLRCQKKPVYSTSLRELLTVKHPVCDILQQKTVR
RSYLYSSKLADIVLSPVERFQRMIGLVESFMFAIPAARAPAPVCWCSKSGASVFLQPTYK
EKCSEVLSPLLFPIRPAIVRRQVYFPDRRLIQFDCGKLQELAILLRKLKSDGHRALIFTQ
MTKMLDILEEFISLYGYTYMRLDGSTQPEERQTLMQRFNTNPKIFLFILSTRSGGVGINL
VGADTVIFYDSDWNPAMDQQAQDRCHRIGQTREVHIYRLISESTIEENILKKANQKRALD
DLVIQSGGYNTEFFKKLDPMELFSGHRTLPMKTMQKEKAINNGNEVSLSNADVEAALKCV
EDEADYMALKRAEQEEAVDNQEFTEEAVGRPEDDELVIEDTVRTDEPTDQGGCMTANNDN
GMMLTGNDPKEERALTFAAKEDDVDMLADVKQMAAAAAAAGEAISSFENQLRPIDRYAIR
FLELWDPIIDKTAVESEVKFEEREWELDRIEKYKEEMEAEIDDDEEPLVYERWDADFATE
AYRQQVALAQHQLMEELESEAKEKEDADDGILDSVKASHSKSKTKKKPKKAKFKSLKKGA
LTSESKAVKEEPSVEPMSIDDDFYDEDATFSDAMSPPSTSQKKRKKAELALYDDEEREKI
SKKKSKKLKKSIPVRSPDSDSKLSRKRHDGSTELKTCESIFIDLEQKSASRSKMGGKISI
TAMPVKRVLMIKPEKLKKGNVWSRDCVPSPDVWLPQEDAILCAVVHEYGPNWSLVSDILY
GMTASGYYRGRYRHPVHCCERFRELIQRYILSVPDNSINEKTSNVGSGKALLKVTEDNVR
TLLNVAAEQEDNELLLQKHFTALLSSVWRMKSRMGCRQNFSSSRNGLYLGGSFFSSVTQT
SCKSTREPARRVKFTNLGQSSKLLSAALHDANSRQQDDKVSNFDRREDGPVIEQLDLTLE
FQRELVDSTISFPPRVNLSVYGSDLETSVNKSTRENHHLKDSQVAENRFRDAARACIEDS
LGWASSAFPANDAKLRSVPKSQSLGKHKLSLSDSVKCPKSKLRKTSMEHSEIQHSSPEPV
SNQSVATKDANLRFDLIQEAWLEDMDGGRLSCMDQDLSLETVLSSEIPHNYFPDVISGLD
DCSILPDYTDIG
The BLAST search returned 5 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 000160
(1992 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2087780 - symbol:PIE1 "PHOTOPERIOD-INDEPENDENT... 5391 0. 2
DICTYBASE|DDB_G0267638 - symbol:DDB_G0267638 "CHR group p... 1302 1.2e-240 7
UNIPROTKB|Q6ZRS2 - symbol:SRCAP "Helicase SRCAP" species:... 1318 1.9e-239 5
UNIPROTKB|E1BC33 - symbol:LOC788113 "Uncharacterized prot... 1318 4.4e-239 6
UNIPROTKB|F1RG74 - symbol:SRCAP "Uncharacterized protein"... 1318 3.5e-238 5
RGD|1565642 - symbol:Srcap "Snf2-related CREBBP activator... 1318 6.8e-235 5
FB|FBgn0020306 - symbol:dom "domino" species:7227 "Drosop... 1340 1.9e-225 5
ASPGD|ASPL0000041040 - symbol:AN9077 species:162425 "Emer... 1809 2.1e-198 4
WB|WBGene00007027 - symbol:ssl-1 species:6239 "Caenorhabd... 1229 4.9e-197 6
POMBASE|SPAC11E3.01c - symbol:swr1 "SNF2 family helicase ... 1791 2.7e-194 4
SGD|S000002742 - symbol:SWR1 "Swi2/Snf2-related ATPase st... 1768 1.2e-188 3
CGD|CAL0001763 - symbol:orf19.1871 species:5476 "Candida ... 723 2.9e-171 5
UNIPROTKB|F6XHF3 - symbol:SRCAP "Uncharacterized protein"... 1318 4.9e-163 6
UNIPROTKB|E2R6G6 - symbol:SRCAP "Uncharacterized protein"... 1318 6.8e-163 6
UNIPROTKB|J9PA15 - symbol:SRCAP "Uncharacterized protein"... 1318 6.6e-160 5
UNIPROTKB|G3N326 - symbol:LOC788113 "Uncharacterized prot... 1318 6.1e-157 4
MGI|MGI:2444036 - symbol:Srcap "Snf2-related CREBBP activ... 1318 4.8e-156 3
GENEDB_PFALCIPARUM|PF08_0048 - symbol:PF08_0048 "ATP-depe... 958 4.0e-142 5
UNIPROTKB|C0H4W3 - symbol:PF08_0048 "Probable ATP-depende... 958 4.0e-142 5
UNIPROTKB|E1C186 - symbol:Gga.53842 "Uncharacterized prot... 857 1.1e-132 5
UNIPROTKB|E1C188 - symbol:Gga.53842 "Uncharacterized prot... 857 1.1e-132 5
ZFIN|ZDB-GENE-081104-186 - symbol:si:ch211-227i14.2 "si:c... 914 2.7e-129 7
MGI|MGI:1276124 - symbol:Ep400 "E1A binding protein p400"... 796 5.9e-127 6
UNIPROTKB|Q96L91 - symbol:EP400 "E1A-binding protein p400... 815 1.3e-125 6
UNIPROTKB|I3L7Y4 - symbol:EP400 "Uncharacterized protein"... 786 4.3e-125 6
UNIPROTKB|I3LPX4 - symbol:EP400 "Uncharacterized protein"... 786 5.6e-125 6
RGD|1310969 - symbol:Ino80 "INO80 homolog (S. cerevisiae)... 788 2.1e-124 3
UNIPROTKB|F1MLB1 - symbol:F1MLB1 "Uncharacterized protein... 784 1.9e-123 7
UNIPROTKB|E1BAN8 - symbol:INO80 "Uncharacterized protein"... 781 2.3e-123 3
DICTYBASE|DDB_G0292358 - symbol:ino80 "CHR group protein"... 812 2.8e-123 3
MGI|MGI:1915392 - symbol:Ino80 "INO80 homolog (S. cerevis... 777 4.7e-123 3
UNIPROTKB|F1SSV0 - symbol:INO80 "Uncharacterized protein"... 781 5.9e-123 3
UNIPROTKB|F1PKX5 - symbol:INO80 "Uncharacterized protein"... 781 7.3e-123 3
ZFIN|ZDB-GENE-041014-72 - symbol:ino80 "INO80 homolog (S.... 798 9.3e-123 4
UNIPROTKB|F1NYY9 - symbol:INO80 "Uncharacterized protein"... 771 1.1e-122 3
UNIPROTKB|Q9ULG1 - symbol:INO80 "DNA helicase INO80" spec... 779 3.6e-122 4
UNIPROTKB|E2QWV6 - symbol:EP400 "Uncharacterized protein"... 757 2.4e-120 7
UNIPROTKB|L7N089 - symbol:EP400 "Uncharacterized protein"... 757 3.5e-120 7
CGD|CAL0000831 - symbol:orf19.1734 species:5476 "Candida ... 780 1.3e-119 3
FB|FBgn0086613 - symbol:Ino80 "Ino80" species:7227 "Droso... 770 4.0e-117 4
ASPGD|ASPL0000047400 - symbol:AN2285 species:162425 "Emer... 767 6.4e-116 4
SGD|S000003118 - symbol:INO80 "ATPase and nucleosome spac... 763 1.1e-115 4
POMBASE|SPAC29B12.01 - symbol:ino80 "SNF2 family helicase... 756 1.6e-114 3
UNIPROTKB|I3LTT5 - symbol:SMARCA1 "Uncharacterized protei... 693 1.7e-112 3
UNIPROTKB|K7GNV1 - symbol:SMARCA1 "Uncharacterized protei... 693 2.7e-106 3
DICTYBASE|DDB_G0292948 - symbol:isw "CHR group protein" s... 713 1.6e-105 4
MGI|MGI:1935127 - symbol:Smarca1 "SWI/SNF related, matrix... 691 1.6e-104 3
UNIPROTKB|F6TQG2 - symbol:SMARCA1 "Probable global transc... 692 1.9e-104 3
MGI|MGI:1935129 - symbol:Smarca5 "SWI/SNF related, matrix... 691 8.7e-104 2
UNIPROTKB|P28370 - symbol:SMARCA1 "Probable global transc... 692 9.9e-104 3
UNIPROTKB|E1C0M8 - symbol:SMARCA5 "Uncharacterized protei... 691 1.1e-103 2
UNIPROTKB|F1N166 - symbol:SMARCA1 "Uncharacterized protei... 698 1.4e-103 4
UNIPROTKB|E2QVR5 - symbol:SMARCA1 "Uncharacterized protei... 688 1.8e-103 3
RGD|1308832 - symbol:Smarca5 "SWI/SNF related, matrix ass... 688 2.0e-103 2
UNIPROTKB|F1N052 - symbol:SMARCA5 "Uncharacterized protei... 688 2.0e-103 2
UNIPROTKB|E2QWV0 - symbol:SMARCA5 "Uncharacterized protei... 688 2.0e-103 2
UNIPROTKB|F1RRG9 - symbol:SMARCA5 "Uncharacterized protei... 688 2.0e-103 2
UNIPROTKB|K7GMM0 - symbol:SMARCA1 "Uncharacterized protei... 693 2.1e-103 3
UNIPROTKB|K7GLQ2 - symbol:SMARCA1 "Uncharacterized protei... 693 3.1e-103 3
UNIPROTKB|F1RTI9 - symbol:SMARCA1 "Uncharacterized protei... 693 5.1e-103 3
ZFIN|ZDB-GENE-021125-1 - symbol:smarca5 "SWI/SNF related,... 679 7.1e-103 3
ZFIN|ZDB-GENE-070705-296 - symbol:si:dkey-148b12.1 "si:dk... 684 1.1e-102 5
UNIPROTKB|O60264 - symbol:SMARCA5 "SWI/SNF-related matrix... 688 1.3e-102 3
RGD|1561046 - symbol:Smarca1 "SWI/SNF related, matrix ass... 687 2.7e-102 3
UNIPROTKB|F1P3Q4 - symbol:SMARCA1 "Uncharacterized protei... 668 4.1e-102 3
UNIPROTKB|F1S594 - symbol:LOC100622433 "Uncharacterized p... 655 5.2e-102 3
TAIR|locus:2150270 - symbol:CHR23 "chromatin remodeling 2... 650 2.0e-101 2
FB|FBgn0011604 - symbol:Iswi "Imitation SWI" species:7227... 651 4.5e-101 4
WB|WBGene00004204 - symbol:swsn-4 species:6239 "Caenorhab... 634 7.1e-101 5
TAIR|locus:2182978 - symbol:CHR17 "chromatin remodeling f... 680 1.7e-100 5
TAIR|locus:2173644 - symbol:CHR1 "chromatin remodeling 1"... 609 8.1e-100 3
ASPGD|ASPL0000042729 - symbol:AN2278 species:162425 "Emer... 665 1.4e-99 4
UNIPROTKB|E1C2F7 - symbol:E1C2F7 "Uncharacterized protein... 652 2.9e-99 6
UNIPROTKB|G4NCV5 - symbol:MGG_01012 "ISWI chromatin-remod... 666 3.1e-99 3
CGD|CAL0005444 - symbol:SNF2 species:5476 "Candida albica... 663 5.7e-99 3
UNIPROTKB|Q5AM49 - symbol:SNF2 "Putative uncharacterized ... 663 5.7e-99 3
UNIPROTKB|D4AA07 - symbol:Smarca4 "Transcription activato... 657 8.8e-99 3
FB|FBgn0000212 - symbol:brm "brahma" species:7227 "Drosop... 658 1.4e-98 4
WB|WBGene00002169 - symbol:isw-1 species:6239 "Caenorhabd... 645 2.8e-98 3
POMBASE|SPAC1250.01 - symbol:snf21 "ATP-dependent DNA hel... 659 3.4e-98 3
UNIPROTKB|P51531 - symbol:SMARCA2 "Probable global transc... 648 5.2e-98 4
UNIPROTKB|E9PTG1 - symbol:Smarca2 "Protein Smarca2" speci... 648 5.4e-98 4
MGI|MGI:99603 - symbol:Smarca2 "SWI/SNF related, matrix a... 648 6.1e-98 4
SGD|S000005816 - symbol:SNF2 "Catalytic subunit of the SW... 662 7.8e-98 2
UNIPROTKB|A5PKK5 - symbol:SMARCA2 "SMARCA2 protein" speci... 648 1.1e-97 4
RGD|1302988 - symbol:Smarca2 "SWI/SNF related, matrix ass... 644 1.5e-97 4
POMBASE|SPCC1620.14c - symbol:snf22 "ATP-dependent DNA he... 667 2.0e-97 3
ZFIN|ZDB-GENE-030605-1 - symbol:smarca4 "SWI/SNF related,... 654 3.0e-97 3
UNIPROTKB|D4A4J2 - symbol:Smarca2 "Protein Smarca2" speci... 648 3.2e-97 5
UNIPROTKB|E2RKP4 - symbol:SMARCA2 "Uncharacterized protei... 648 4.7e-97 4
DICTYBASE|DDB_G0271052 - symbol:snf2b "SNF2-related prote... 651 5.2e-97 5
UNIPROTKB|J9P5P2 - symbol:SMARCA2 "Uncharacterized protei... 648 5.2e-97 4
UNIPROTKB|A7Z019 - symbol:SMARCA4 "Transcription activato... 657 7.1e-97 4
SGD|S000005831 - symbol:ISW2 "ATP-dependent DNA transloca... 614 7.2e-97 2
MGI|MGI:88192 - symbol:Smarca4 "SWI/SNF related, matrix a... 657 7.4e-97 4
RGD|621728 - symbol:Smarca4 "SWI/SNF related, matrix asso... 657 7.4e-97 4
UNIPROTKB|E2RJ89 - symbol:SMARCA4 "Uncharacterized protei... 657 7.4e-97 4
UNIPROTKB|G3V790 - symbol:Smarca4 "SWI/SNF related, matri... 657 7.4e-97 4
UNIPROTKB|F1M6Y4 - symbol:Smarca4 "Transcription activato... 657 7.6e-97 4
UNIPROTKB|F1SJG5 - symbol:SMARCA2 "Uncharacterized protei... 648 7.7e-97 4
WARNING: Descriptions of 472 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2087780 [details] [associations]
symbol:PIE1 "PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1"
species:3702 "Arabidopsis thaliana" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0004386 "helicase activity" evidence=IEA;ISS] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0009910 "negative regulation of flower development"
evidence=IGI] [GO:0016514 "SWI/SNF complex" evidence=ISS]
[GO:0048441 "petal development" evidence=IGI] [GO:0048451 "petal
formation" evidence=IGI;RCA] [GO:0005618 "cell wall" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0042742 "defense
response to bacterium" evidence=IGI;RCA] [GO:0046686 "response to
cadmium ion" evidence=IEP] [GO:0000278 "mitotic cell cycle"
evidence=RCA] [GO:0003002 "regionalization" evidence=RCA]
[GO:0006338 "chromatin remodeling" evidence=RCA] [GO:0007155 "cell
adhesion" evidence=RCA] [GO:0009793 "embryo development ending in
seed dormancy" evidence=RCA] [GO:0009909 "regulation of flower
development" evidence=RCA] [GO:0010090 "trichome morphogenesis"
evidence=RCA] [GO:0010228 "vegetative to reproductive phase
transition of meristem" evidence=RCA] [GO:0033043 "regulation of
organelle organization" evidence=RCA] [GO:0045010 "actin
nucleation" evidence=RCA] [GO:0048449 "floral organ formation"
evidence=RCA] [GO:0048453 "sepal formation" evidence=RCA]
[GO:0048765 "root hair cell differentiation" evidence=RCA]
[GO:0071555 "cell wall organization" evidence=RCA]
InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR009057 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 SMART:SM00717 GO:GO:0005524 GO:GO:0005618
GO:GO:0046686 EMBL:CP002686 GO:GO:0003677 GO:GO:0042742
GO:GO:0003682 Gene3D:1.10.10.60 GO:GO:0016514 GO:GO:0004386
GO:GO:0009910 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR017877 PROSITE:PS50090
InterPro:IPR013999 InterPro:IPR014012 InterPro:IPR006562
Pfam:PF07529 SMART:SM00573 PROSITE:PS51204 KO:K11320 GO:GO:0048451
EMBL:AY279398 IPI:IPI00545059 RefSeq:NP_187887.3 UniGene:At.39549
SMR:Q7X9V2 IntAct:Q7X9V2 STRING:Q7X9V2 EnsemblPlants:AT3G12810.1
GeneID:820463 KEGG:ath:AT3G12810 TAIR:At3g12810 InParanoid:Q7X9V2
OMA:CCHPPPS ProtClustDB:CLSN2680833 Genevestigator:Q7X9V2
Uniprot:Q7X9V2
Length = 2055
Score = 5391 (1902.8 bits), Expect = 0., Sum P(2) = 0.
Identities = 1138/1943 (58%), Positives = 1325/1943 (68%)
Query: 1 MLDQASRGXXXXXXXXXXXXXVAVNISKDVKKFWMKIEKLVLYKHQMEVDVRKKKALDKQ 60
MLDQASR VA+NISKD+KKFWMK+EKLVLYKHQ+ + +KKKA+DKQ
Sbjct: 84 MLDQASREERKLKEEEQRLRKVALNISKDMKKFWMKVEKLVLYKHQLVRNEKKKKAMDKQ 143
Query: 61 LEFLLGQTERYSSMLAENLVDSHKPVQQSPMREQPGIQYKEADENGAEE--PGVQSKEAD 118
LEFLLGQTERYS+MLAENLV+ +K Q +P + I+ K +DE AE+ P + S
Sbjct: 144 LEFLLGQTERYSTMLAENLVEPYKQGQNTPSKPLLTIESK-SDEERAEQIPPEINSSAGL 202
Query: 119 EDDAEQHSGFEPQLDAADIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 178
E SG P+LD
Sbjct: 203 E------SG-SPELDE-----DYDLKSEDETEDDEDTIEEDEKHFTKRERQEELEALQNE 250
Query: 179 TDIPLQELLKRYAVDKVGRESSAEMGE----------------DEAEPTVVEEGHVQGNG 222
D+P++ELL+RY +V RE+S E DE + + G G
Sbjct: 251 VDLPVEELLRRYTSGRVSRETSPVKDENEDNLTSVSRVTSPVKDENQDNLASVGQDHGED 310
Query: 223 NDLLAGSKLDTSGS-LVRRCDEINGGLSISENHLLDIETSQVRDTSKKSGASTQKQALYD 281
+ LA S+ +T G+ VRR ++ G L+ISE H D+E + K S ++ YD
Sbjct: 311 KNNLAASE-ETEGNPSVRRSNDSYGHLAISETHSHDLEPGMTTASVK----SRKEDHTYD 365
Query: 282 FSDEQEDGDFVVATGXXXXXXXXXXXXXXXXXXDSNNYIDEIALLQKESEIPVEELLARY 341
F+DEQED DFV+A G D+ ++++EIALLQKESE+P+E LLARY
Sbjct: 366 FNDEQEDVDFVLANGEEKDDEATLAVEEELAKADNEDHVEEIALLQKESEMPIEVLLARY 425
Query: 342 RKDMKINKIXXXXXXXXXXXXXXXXXXPAHEDGELKLENDFMDGNVDPGASQLVMLPLTX 401
++D I + E + + D D NVD +L P +
Sbjct: 426 KEDFGGKDISEDESESSFAVSEDSIV----DSDENRQQADLDDDNVDLTECKLDPEPCSE 481
Query: 402 XXXXXXXXXXXXXXX-XXNRIXXXXXXXXXXQPTGITFSTTQVRTKFPFLLKFPLREYQH 460
++I QPTG T+STT+VRTK PFLLK LREYQH
Sbjct: 482 NVEGTFHEVAEDNDKDSSDKIADAAAAARSAQPTGFTYSTTKVRTKLPFLLKHSLREYQH 541
Query: 461 IGLDWLVTMYEKRLNGILADEMGLGKTIMTIAMLAHLACEKGIWGPHLIVVPTSVMLNWE 520
IGLDWLVTMYEK+LNGILADEMGLGKTIMTIA+LAHLAC+KGIWGPHLIVVPTSVMLNWE
Sbjct: 542 IGLDWLVTMYEKKLNGILADEMGLGKTIMTIALLAHLACDKGIWGPHLIVVPTSVMLNWE 601
Query: 521 TEFLKWCPAFKILTYFGSAKERKFKRQGWLKPNSFHVCITTYRLIIQDSKVFKRKKWKYL 580
TEFLKWCPAFKILTYFGSAKERK KRQGW+K NSFHVCITTYRL+IQDSK+FKRKKWKYL
Sbjct: 602 TEFLKWCPAFKILTYFGSAKERKLKRQGWMKLNSFHVCITTYRLVIQDSKMFKRKKWKYL 661
Query: 581 ILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPLQNDLMELWSLMHFLMPHIFQSHQEF 640
ILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPLQNDLMELWSLMHFLMPH+FQSHQEF
Sbjct: 662 ILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPLQNDLMELWSLMHFLMPHVFQSHQEF 721
Query: 641 KDWFCNPISGMVEGQEKVNKEVVDRLHNVLRPFILRRLKRDVEKQLPMKQEHVIYCRLSK 700
KDWFCNPI+GMVEGQEK+NKEV+DRLHNVLRPF+LRRLKRDVEKQLP K EHVI+CRLSK
Sbjct: 722 KDWFCNPIAGMVEGQEKINKEVIDRLHNVLRPFLLRRLKRDVEKQLPSKHEHVIFCRLSK 781
Query: 701 RQRNLYEDFIASSETQATLASANFFGMISVIMQLRKVCNHPDLFEGRPIVSSFDMSGIDX 760
RQRNLYEDFIAS+ETQATL S +FFGMIS+IMQLRKVCNHPDLFEGRPIVSSFDM+GID
Sbjct: 782 RQRNLYEDFIASTETQATLTSGSFFGMISIIMQLRKVCNHPDLFEGRPIVSSFDMAGIDV 841
Query: 761 XXXXXXXXXXXXXXXXTADLKGLGLLFTNLDFSMNSWESDELNAIATPASLIKERADL-N 819
DL+ LG LFT+LDFSM SWE DE+ AI+TP+ LIK+R +L +
Sbjct: 842 QLSSTICSLLLESPFSKVDLEALGFLFTHLDFSMTSWEGDEIKAISTPSELIKQRVNLKD 901
Query: 820 NLEEVGPFCTHRKRLNGTSIFXXXXXXXXXXXXXXXQDRASSVAWWNSLRCQKKPVYSTS 879
+LE + +RK L GT+IF +DRA+++AWWNSLRCQ+KP YSTS
Sbjct: 902 DLEAIPLSPKNRKNLQGTNIFEEIRKAVFEERIQESKDRAAAIAWWNSLRCQRKPTYSTS 961
Query: 880 LRELLTVKHPVCDILQQKTVRRSYLYSSKLADIVLSPVERFQRMIGLVESFMFAIPAARA 939
LR LLT+K P+ D+ K SY+YSS LADIVLSP+ERFQ+MI LVE+F FAIPAAR
Sbjct: 962 LRTLLTIKGPLDDL---KANCSSYMYSSILADIVLSPIERFQKMIELVEAFTFAIPAARV 1018
Query: 940 PAPVCWCSKSGASVFLQPTYKEKCSEVLSPLLFPIRPAIVRRQVYFPDRRLIQFDCGKLQ 999
P+P CWCSKS + VFL P+YKEK +++LSPLL PIRPAIVRRQVYFPDRRLIQFDCGKLQ
Sbjct: 1019 PSPTCWCSKSDSPVFLSPSYKEKVTDLLSPLLSPIRPAIVRRQVYFPDRRLIQFDCGKLQ 1078
Query: 1000 ELAILLRKLKSDGHRALIFTQMTKMLDILEEFISLYGYTYMRLDGSTQPEERQTLMQRFN 1059
ELA+LLRKLK GHRALIFTQMTKMLD+LE FI+LYGYTYMRLDGST PEERQTLMQRFN
Sbjct: 1079 ELAMLLRKLKFGGHRALIFTQMTKMLDVLEAFINLYGYTYMRLDGSTPPEERQTLMQRFN 1138
Query: 1060 TNPKIFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQDRCHRIGQTREVHIYRL 1119
TNPKIFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQDRCHRIGQTREVHIYRL
Sbjct: 1139 TNPKIFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQDRCHRIGQTREVHIYRL 1198
Query: 1120 ISESTIEENILKKANQKRALDDLVIQSGGYNTEFFKKLDPMELFSGHRTLPMKTMQKEKA 1179
ISESTIEENILKKANQKR LD+LVIQ+G YNTEFFKKLDPMELFSGH+ L K +KE +
Sbjct: 1199 ISESTIEENILKKANQKRVLDNLVIQNGEYNTEFFKKLDPMELFSGHKALTTKD-EKETS 1257
Query: 1180 INNGNEVSLSNADVEAALKCVEDEADYMALKRAEQEEAVDNQEFTEEAVGRPEDDELVIE 1239
+ G ++ LSNADVEAALK EDEADYMALKR EQEEAVDNQEFTEE V RPEDDELV E
Sbjct: 1258 KHCGADIPLSNADVEAALKQAEDEADYMALKRVEQEEAVDNQEFTEEPVERPEDDELVNE 1317
Query: 1240 DTVRTDEPTDQGGCMTANNDNGMMLTGNDPKEERA-LTFAAKEDDVDMLADVKQMXXXXX 1298
D ++ DEP DQG M L +D ++ERA +T +++EDD D+L DVKQM
Sbjct: 1318 DDIKADEPADQGLVAAGPAKEEMSLLHSDIRDERAVITTSSQEDDTDVLDDVKQMAAAAA 1377
Query: 1299 XXGEAISSFENQLRPIDRYAIRFLELWDPIIDKTAVESEVKFEEREWELDRIEKYKXXXX 1358
G+AISSFENQLRPIDRYAIRFLELWDPII + A+E+E FEE+EWELD IEKYK
Sbjct: 1378 DAGQAISSFENQLRPIDRYAIRFLELWDPIIVEAAMENEAGFEEKEWELDHIEKYKEEME 1437
Query: 1359 XXXXXXXXPLVYERWDADFATEAYRQQV-ALAQHQLMXXXXXXXXXXXXXXXG---ILDX 1414
PLVYE+WDADFATEAYRQQV LAQHQLM +
Sbjct: 1438 AEIDDGEEPLVYEKWDADFATEAYRQQVEVLAQHQLMEDLENEAREREAAEVAEMVLTQN 1497
Query: 1415 XXXXXXXXXXXXXXXXXXXXXXXXXXLTSESKAVKEEPSVEPMSIDD--DFYDEDATFSD 1472
L +ESK VK +E + DD +F ++ SD
Sbjct: 1498 ESAHVLKPKKKKKAKKAKYKSLKKGSLAAESKHVKSVVKIEDSTDDDNEEFGYVSSSDSD 1557
Query: 1473 AMSPPSTSQKKRKKAELALYDDEEREXXXXXXXXXXXXXXPVRSPDSDSKLSRKRH--DG 1530
++P S K KK +L + DEE+ P+SD K + D
Sbjct: 1558 MVTPLSRMHMKGKKRDLIVDTDEEKTSKKKAKKHKKSL------PNSDIKYKQTSALLDE 1611
Query: 1531 STELKTCESIFIDLEQKSASRSKMGGKISITAMPVKRVLMIKPEKLKKGNVWSRDCVPSP 1590
K +S+ +D E K +R K GK IT+MP+KRVLMIKPEKLKKGN+WSRDCVPSP
Sbjct: 1612 LEPSKPSDSMVVDNELKLTNRGKTVGKKFITSMPIKRVLMIKPEKLKKGNLWSRDCVPSP 1671
Query: 1591 DVWLPQEDAILCAVVHEYGPNWSLVSDILYGMTASGYYRGRYRHPVHCCERFRELIQRYI 1650
D WLPQEDAILCA+VHEYGPNW+ VS LYGMTA G YRGRYRHP +CCER+RELIQR+I
Sbjct: 1672 DSWLPQEDAILCAMVHEYGPNWNFVSGTLYGMTAGGAYRGRYRHPAYCCERYRELIQRHI 1731
Query: 1651 LSVPDNSINEKTSNVGSGKALLKVTEDNVRTLLNVAAEQEDNELLLQKHFTALLSSVWRM 1710
LS D+++NEK N GSGKALLKVTE+N+RTLLNVAAEQ D E+LLQKHF+ LLSS+WR
Sbjct: 1732 LSASDSAVNEKNLNTGSGKALLKVTEENIRTLLNVAAEQPDTEMLLQKHFSCLLSSIWRT 1791
Query: 1711 KSRMGCRQNFSSSRNGLYLGGSFFSSVTQTSCKSTREPARRVKFTNLGQSSKLLSAALHD 1770
+R G Q S N F SV T R+P + +K T+L S KLL +AL D
Sbjct: 1792 STRTGNDQMLSL--NSPIFNRQFMGSVNHTQ-DLARKPWQGMKVTSL--SRKLLESALQD 1846
Query: 1771 ANSRQQDDKVSNFDRREDGPVIEQ-LDLTLEFQRELVDSTISFPPRVNLSVYGSDLETSV 1829
+ Q D+ +S +E P+ + L+LTLEF R DS FPP ++LS+ GSD V
Sbjct: 1847 SGPSQPDNTISRSRLQETQPINKLGLELTLEFPRGNDDSLNQFPPMISLSIDGSDSLNYV 1906
Query: 1830 NKSTRENHHLKDSQVA-ENRFRDAARACIEDSLGWASSAFPANDAKLRSVPKSQSLGKHK 1888
N+ E+ LK S+VA ENR+R+AA ACIEDS GWAS+ FPAND K R+ K+QSLGKHK
Sbjct: 1907 NEPPGEDV-LKGSRVAAENRYRNAANACIEDSFGWASNTFPANDLKSRTGTKAQSLGKHK 1965
Query: 1889 LSLSDSVKCPKSKLRKTSMEHSE 1911
LS SDS K KSK RK E E
Sbjct: 1966 LSASDSAKSTKSKHRKLLAEQLE 1988
Score = 396 (144.5 bits), Expect = 0., Sum P(2) = 0.
Identities = 112/271 (41%), Positives = 145/271 (53%)
Query: 1723 SRNGLYLGGSFFSSVTQTSCKSTREPARRVKFTNLGQSSKLLSAALHDANSRQQDDKVSN 1782
S N F SV T R+P + +K T+L S KLL +AL D+ Q D+ +S
Sbjct: 1802 SLNSPIFNRQFMGSVNHTQ-DLARKPWQGMKVTSL--SRKLLESALQDSGPSQPDNTISR 1858
Query: 1783 FDRREDGPVIEQ-LDLTLEFQRELVDSTISFPPRVNLSVYGSDLETSVNKSTRENHHLKD 1841
+E P+ + L+LTLEF R DS FPP ++LS+ GSD VN+ E+ LK
Sbjct: 1859 SRLQETQPINKLGLELTLEFPRGNDDSLNQFPPMISLSIDGSDSLNYVNEPPGEDV-LKG 1917
Query: 1842 SQVA-ENRFRDAARACIEDSLGWASSAFPANDAKLRSVPKSQSLGKHKLSLSDSVKCPKS 1900
S+VA ENR+R+AA ACIEDS GWAS+ FPAND K R+ K+QSLGKHKLS SDS K KS
Sbjct: 1918 SRVAAENRYRNAANACIEDSFGWASNTFPANDLKSRTGTKAQSLGKHKLSASDSAKSTKS 1977
Query: 1901 KLRKTSMEHSEIQHSSPEPVSNQSVATKDANLRFDLIQEAWLEDMDGGRLSCMDQDLSLE 1960
K RK E E V D NL+FD E+ + + +E
Sbjct: 1978 KHRKLLAEQLE----------GAWVRPNDPNLKFDFTPGD-REEEEEQEVDEKANSAEIE 2026
Query: 1961 TVLSSEIPHNYFPDVISGLDDCSILPDYTDI 1991
+ S+ Y P SGLDDCS+ D ++I
Sbjct: 2027 MISCSQW---YDPFFTSGLDDCSLASDISEI 2054
Score = 48 (22.0 bits), Expect = 9.0e-31, Sum P(2) = 9.0e-31
Identities = 11/29 (37%), Positives = 20/29 (68%)
Query: 1325 WDPIIDKTAVESEVKFE-EREWELDRIEK 1352
WD ++++ A S+ FE ER+W+L + +K
Sbjct: 48 WDHVLEEMAWLSK-DFESERKWKLAQAKK 75
Score = 38 (18.4 bits), Expect = 1.0e-29, Sum P(2) = 1.0e-29
Identities = 7/22 (31%), Positives = 16/22 (72%)
Query: 577 WKYLILDEAHLIKNWKSQR-WQ 597
W +++ + A L K+++S+R W+
Sbjct: 48 WDHVLEEMAWLSKDFESERKWK 69
>DICTYBASE|DDB_G0267638 [details] [associations]
symbol:DDB_G0267638 "CHR group protein" species:44689
"Dictyostelium discoideum" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR009057 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 SMART:SM00717 dictyBase:DDB_G0267638 GO:GO:0005524
GO:GO:0003677 EMBL:AAFI02000003 GO:GO:0003682 SUPFAM:SSF46689
GO:GO:0004386 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR017877 PROSITE:PS50090
InterPro:IPR014012 PROSITE:PS51204 KO:K11320 RefSeq:XP_647182.1
ProteinModelPortal:Q55GK2 EnsemblProtists:DDB0220518 GeneID:8615986
KEGG:ddi:DDB_G0267638 InParanoid:Q55GK2 OMA:ISFEAFA Uniprot:Q55GK2
Length = 3069
Score = 1302 (463.4 bits), Expect = 1.2e-240, Sum P(7) = 1.2e-240
Identities = 229/383 (59%), Positives = 305/383 (79%)
Query: 432 QPTGITFSTTQVRTKFPFLLKFPLREYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTI 491
QPTG T +T+ VRTK PFLLKFPLREYQHIGLDWLV++YEK LNGILADEMGLGKTIMTI
Sbjct: 758 QPTGFTLNTSNVRTKVPFLLKFPLREYQHIGLDWLVSLYEKNLNGILADEMGLGKTIMTI 817
Query: 492 AMLAHLACEKGIWGPHLIVVPTSVMLNWETEFLKWCPAFKILTYFGSAKERKFKRQGWLK 551
+++A+LA +KG+WGPHLIVVP+SV+ NWE EF +WCP KI TY G++++RK R+GW K
Sbjct: 818 SLIAYLAVQKGVWGPHLIVVPSSVLFNWEMEFKRWCPGLKIFTYHGTSRDRKANRKGWSK 877
Query: 552 PNSFHVCITTYRLIIQDSKVFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLT 611
N+FHVCIT+Y +++ D +F+RKKW Y+ILDEAH+IKN+K+QRWQ +L+FN++RR+LLT
Sbjct: 878 SNAFHVCITSYSMVMSDHLIFRRKKWVYMILDEAHVIKNFKTQRWQNMLHFNTERRLLLT 937
Query: 612 GTPLQNDLMELWSLMHFLMPHIFQSHQEFKDWFCNPISGMVEGQEKVNKEVVDRLHNVLR 671
GTPLQN+LMELWSLMHFLMP IFQSH+EF+DWF NP++GM+EG + VN+++++RLH VLR
Sbjct: 938 GTPLQNNLMELWSLMHFLMPDIFQSHREFQDWFSNPVTGMIEGGDDVNEDIINRLHAVLR 997
Query: 672 PFILRRLKRDVEKQLPMKQEHVIYCRLSKRQRNLYEDFIASSETQATLASANFFGMISVI 731
PF+LRRLK+DVEKQ+P K H++ C +S+RQ+ LYE+FI SS TQ+TL+S +FF +I+++
Sbjct: 998 PFLLRRLKKDVEKQMPPKHTHIVPCSMSRRQKFLYEEFINSSSTQSTLSSGSFFSIINIL 1057
Query: 732 MQLRKVCNHPDLFEGRPIVSSFDMSGIDXXXXXXXXXXXXXXXXXTADLKGLGLLFTNLD 791
MQLRKVCNHPDLFE RPIVS ++ I +L L L N +
Sbjct: 1058 MQLRKVCNHPDLFEIRPIVSPLELYPIHFKTSSIVIDILDDIPIKNLNLNLLNLDLINYE 1117
Query: 792 FSMNSWESDELNAIATPASLIKE 814
S + ++S+++N++ S++ E
Sbjct: 1118 NSFSHYDSNQINSLIPKESVLLE 1140
Score = 838 (300.0 bits), Expect = 1.2e-240, Sum P(7) = 1.2e-240
Identities = 181/356 (50%), Positives = 239/356 (67%)
Query: 873 KPVYSTSLRELLTVKHPVCDILQQKTVRRSYLYSSKLADIVLSPVERFQRMIGLVESFMF 932
+P+Y L E + + P+ D YS+ L D++++P++R Q MI ++E+F F
Sbjct: 1254 RPIYGRDLIESVKITDPIRDWFTISKPSNYMSYSNYLVDLIMTPIQRQQSMIKIIENFTF 1313
Query: 933 AIPAARAPAPVCWCSKSGASVFLQPTYKEKCSEV--LSPLLFP-IRPAIVRRQVYFPDRR 989
I ARA P+ + L ++ + + LS F P+ R ++YFPD+R
Sbjct: 1314 LISTARAE-PITLLQYGASPSKLLEEHRNEVLLINGLSKSSFDAFYPSYQRMKLYFPDKR 1372
Query: 990 LIQFDCGKLQELAILLRKLKSDGHRALIFTQMTKMLDILEEFISLYGYTYMRLDGSTQPE 1049
LIQ+DCGKLQ+LAILLR+LK GHRALIFTQMTKMLDI E F++L+ YTY+RLDGST+ +
Sbjct: 1373 LIQYDCGKLQQLAILLRRLKQQGHRALIFTQMTKMLDIFETFLNLHAYTYLRLDGSTKID 1432
Query: 1050 ERQTLMQRFNTNPKIFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQDRCHRIG 1109
+RQ L +RFNT+PKIFLFILSTRSGG+G+NL GADTVIFYD+DWNP+MD QAQDRCHRIG
Sbjct: 1433 KRQVLTERFNTDPKIFLFILSTRSGGLGLNLTGADTVIFYDTDWNPSMDAQAQDRCHRIG 1492
Query: 1110 QTREVHIYRLISESTIEENILKKANQKRALDDLVIQSGGYNTEFFKKLDPMELFSGHRTL 1169
QTREV+IYR I++ TIEENILKK+NQKR LD +VI++G + T+FFK L+ + S T+
Sbjct: 1493 QTREVNIYRFITQHTIEENILKKSNQKRQLDKMVIKAGEFTTDFFKNLN-LSTKSSIDTI 1551
Query: 1170 PMKTMQKEKAINNGNEVSLSNADVEAALKCVEDEADYMALKRAEQEEAVDNQEFTE 1225
Q+E NA VE A EDE+D +A K A +E + QEF E
Sbjct: 1552 KDNVTQQE----------WENA-VEQA----EDESDVLAYKNALKEADNEYQEFVE 1592
Score = 164 (62.8 bits), Expect = 1.2e-240, Sum P(7) = 1.2e-240
Identities = 39/103 (37%), Positives = 58/103 (56%)
Query: 22 VAVNISKDVKKFWMKIEKLVLYKHQMEVDVRKKKALDKQLEFLLGQTERYSSMLAENLVD 81
VA N+SK+++KFW +I+KLV YK ++ D K DKQLE ++G+TE YS++LAENL
Sbjct: 564 VASNVSKEIRKFWNQIKKLVQYKDKIHQDSINKIERDKQLELIVGKTEAYSNLLAENLRG 623
Query: 82 SHKPVQQSPMREQPGIQYKEADENGAE-EPGVQSKEADEDDAE 123
H ++ + DE+G E E +DE +
Sbjct: 624 HHHHHSTITPKDLLNQFDHDVDEDGNEIEYNDDFNTSDESSCD 666
Score = 70 (29.7 bits), Expect = 1.2e-240, Sum P(7) = 1.2e-240
Identities = 42/186 (22%), Positives = 67/186 (36%)
Query: 1466 EDATFSDAMSPPST---SQKKRKKAELALYDDEEREXXXXXXXXXXXXXXPVRSPDSDSK 1522
E++ S PST S RKK+E L+D ++ + +P S S
Sbjct: 2243 EESLVSKQGGVPSTTTNSSTSRKKSEYDLFDASSQDEGSTNESGSTTNNNNINNPTSTSS 2302
Query: 1523 LSRKRHDGSTELKTCESIFIDLEQKSASRSKMGGKISITAMPVKRVLMIKPEKLKKGNVW 1582
S K ++ S S +GG S P+ I + +
Sbjct: 2303 SSSSSGRKRDRKK---------QRLSKSNGGVGGGGSDLESPISSS-SISGIFINSDLIL 2352
Query: 1583 SRDCVPSPDVWLPQEDAILCAVVHEYGPNWSLVSDILYGMTASGYYRGRYRHPVHCCERF 1642
+ P W QED ++ V +G NW L++ I+ S R R ER+
Sbjct: 2353 NHMGPP----WSQQEDKLILDNVKNFGENWDLITFIIQNSNYSRINRVT-RSKSQISERY 2407
Query: 1643 RELIQR 1648
+ +IQ+
Sbjct: 2408 K-VIQK 2412
Score = 55 (24.4 bits), Expect = 1.2e-240, Sum P(7) = 1.2e-240
Identities = 12/34 (35%), Positives = 22/34 (64%)
Query: 315 DSNNYIDEIALLQKESEIPVEELLARYRKDMKIN 348
+S Y++E+ L ESE+P++ELL + ++ N
Sbjct: 684 ESKEYLEELKL---ESEMPLDELLKKLDQEKSDN 714
Score = 48 (22.0 bits), Expect = 5.2e-240, Sum P(8) = 5.2e-240
Identities = 21/89 (23%), Positives = 34/89 (38%)
Query: 1653 VPDNSINEKTSNVGSGKALLKVTEDNVRTLLNVAAEQEDNELLLQKHFTALLSSVWRMKS 1712
VP + N TS S L + + + + +N + ++ SS R +
Sbjct: 2253 VPSTTTNSSTSRKKSEYDLFDASSQDEGSTNESGSTTNNNNINNPTSTSSSSSSSGRKRD 2312
Query: 1713 RMGCRQNFSSSRNGLYLGGSFFSSVTQTS 1741
R +Q S S G+ GGS S +S
Sbjct: 2313 RK--KQRLSKSNGGVGGGGSDLESPISSS 2339
Score = 47 (21.6 bits), Expect = 1.2e-240, Sum P(7) = 1.2e-240
Identities = 8/32 (25%), Positives = 19/32 (59%)
Query: 1816 VNLSVYGSDLETSVNKSTRENHHLKDSQVAEN 1847
+N+S+ S+ ++N +T N++L ++ N
Sbjct: 2823 INISIPNSNQPMAINNNTNNNNNLNNNNNNNN 2854
Score = 46 (21.3 bits), Expect = 1.2e-240, Sum P(7) = 1.2e-240
Identities = 13/45 (28%), Positives = 22/45 (48%)
Query: 1202 DEADYMALKRAEQEEAVDNQEFTEEAVGRPEDDELVIEDTVRTDE 1246
DE D LK E+E+ +N+ E + +D+E E + +E
Sbjct: 1731 DEKDKENLKENEKEKENENENENENENEKEKDNEKEREKQEKENE 1775
Score = 41 (19.5 bits), Expect = 9.8e-155, Sum P(6) = 9.8e-155
Identities = 23/103 (22%), Positives = 41/103 (39%)
Query: 1171 MKTMQKEKAINNGNEVSLSNA-----DVEAALKCVEDEADYMALKRAEQEEAVDNQEFTE 1225
+K +KEK N NE N + E + E+E + K E+E +N++ E
Sbjct: 1738 LKENEKEKENENENENENENEKEKDNEKEREKQEKENEIEIEKEKGNEKENEKENEKEKE 1797
Query: 1226 EAVGRPED--------DELVIEDTVRTDEPTDQGGCMTANNDN 1260
+ +D E+ I + + D+ + NN+N
Sbjct: 1798 NERDKDKDKDQDQDKDQEMKIINEIPPKNDEDEDNNINNNNNN 1840
Score = 41 (19.5 bits), Expect = 9.8e-91, Sum P(7) = 9.8e-91
Identities = 8/26 (30%), Positives = 18/26 (69%)
Query: 614 PLQNDLMELWSLMHFLMPHIFQSHQE 639
P ++ L+EL++ + +P+I Q +Q+
Sbjct: 1133 PKESVLLELFNQLAISLPNISQYNQQ 1158
Score = 40 (19.1 bits), Expect = 1.2e-154, Sum P(6) = 1.2e-154
Identities = 17/86 (19%), Positives = 34/86 (39%)
Query: 1175 QKEKAINNGNEVSLSNADVEAALKCVEDEADYMALKRAEQEEAVDNQEFTEEAVGRPEDD 1234
+KEK E ++E K +E + E+E D + ++ + ++
Sbjct: 1758 EKEKDNEKEREKQEKENEIEIE-KEKGNEKENEKENEKEKENERDKDKDKDQDQDKDQEM 1816
Query: 1235 ELVIEDTVRTDEPTDQGGCMTANNDN 1260
+++ E + DE D NN+N
Sbjct: 1817 KIINEIPPKNDEDEDNNINNNNNNNN 1842
Score = 40 (19.1 bits), Expect = 2.6e-06, Sum P(5) = 2.6e-06
Identities = 17/71 (23%), Positives = 30/71 (42%)
Query: 1126 EENILKKANQKRALDDLVIQSGGYNTEFFKKLDPMELFSG---HRTLPMKTMQKEKAINN 1182
E++ ++ K L++L ++S E KKLD + + + NN
Sbjct: 676 EDDDGEQLESKEYLEELKLESEMPLDELLKKLDQEKSDNDDDDNNNNEDDNNNNNNNNNN 735
Query: 1183 GNEVSLSNADV 1193
NE S+S D+
Sbjct: 736 NNENSISTKDI 746
Score = 39 (18.8 bits), Expect = 0.00013, Sum P(6) = 0.00013
Identities = 8/26 (30%), Positives = 13/26 (50%)
Query: 205 EDEAEPTVVEEGHVQGNGNDLLAGSK 230
+DEA+ +E + GND G +
Sbjct: 1952 DDEADDDGDDEADDENEGNDFEGGGR 1977
Score = 38 (18.4 bits), Expect = 5.2e-240, Sum P(8) = 5.2e-240
Identities = 9/30 (30%), Positives = 17/30 (56%)
Query: 1468 ATFSDAMSPPSTSQKKRKKAELALYDDEER 1497
++ S + S STS K +KK+ + ++R
Sbjct: 2184 SSLSSSTSSISTSNKDKKKSSSSSSSSKKR 2213
Score = 38 (18.4 bits), Expect = 8.3e-240, Sum P(7) = 8.3e-240
Identities = 24/111 (21%), Positives = 43/111 (38%)
Query: 1215 EEAVDNQEFTEEAVGRPED--DELVIEDTVRTDEPTDQGGCMTANNDNGMMLTGNDPKEE 1272
++ V QE+ E AV + ED D L ++ ++ + Q ++ +
Sbjct: 1552 KDNVTQQEW-ENAVEQAEDESDVLAYKNALKEADNEYQEFVEIKDDKSSFTTITTTTSNV 1610
Query: 1273 RALTFAAKEDDVDMLADVKQMXXXXXXXGEAISSFENQLRPIDRYAIRFLE 1323
T DD+DM+ DV E+ L PI ++A++ E
Sbjct: 1611 STPTTNNSSDDIDMV-DVDDNTQDLV---------EDYLNPIQKFALKLTE 1651
Score = 38 (18.4 bits), Expect = 1.1e-76, Sum P(6) = 1.1e-76
Identities = 8/25 (32%), Positives = 15/25 (60%)
Query: 589 KNWKSQRWQTLLNFNSKRRILLTGT 613
K+ + +R Q+LLN +++ T T
Sbjct: 279 KSERLKRQQSLLNSTDSKKLSTTST 303
Score = 37 (18.1 bits), Expect = 9.3e-239, Sum P(7) = 9.3e-239
Identities = 7/16 (43%), Positives = 12/16 (75%)
Query: 179 TDIPLQELLKRYAVDK 194
+++PL ELLK+ +K
Sbjct: 696 SEMPLDELLKKLDQEK 711
Score = 37 (18.1 bits), Expect = 9.8e-235, Sum P(6) = 9.8e-235
Identities = 9/21 (42%), Positives = 10/21 (47%)
Query: 1468 ATFSDAMSPPSTSQKKRKKAE 1488
AT +SPP KR K E
Sbjct: 2964 ATTPTTVSPPIKPVSKRSKKE 2984
Score = 37 (18.1 bits), Expect = 0.00013, Sum P(6) = 0.00013
Identities = 11/41 (26%), Positives = 21/41 (51%)
Query: 239 RRCDEINGGLSISENHLLDIETSQVRDTSKKSGASTQKQAL 279
++ + + LS S N++++ S S SG+ST +L
Sbjct: 2146 KKSNSSSSTLSNSNNNVINNSNSGNVTVSGYSGSSTPSSSL 2186
>UNIPROTKB|Q6ZRS2 [details] [associations]
symbol:SRCAP "Helicase SRCAP" species:9606 "Homo sapiens"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0019048 "virus-host interaction" evidence=IEA] [GO:0043234
"protein complex" evidence=IDA] [GO:0003713 "transcription
coactivator activity" evidence=TAS] [GO:0004402 "histone
acetyltransferase activity" evidence=TAS] [GO:0006357 "regulation
of transcription from RNA polymerase II promoter" evidence=TAS]
[GO:0016573 "histone acetylation" evidence=TAS] [GO:0005634
"nucleus" evidence=IDA] [GO:0005794 "Golgi apparatus" evidence=IDA]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR017956
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00384
SMART:SM00490 GO:GO:0005524 GO:GO:0005634 GO:GO:0005794
GO:GO:0019048 GO:GO:0043234 GO:GO:0003677 InterPro:IPR020478
PRINTS:PR00929 GO:GO:0006357 GO:GO:0006351 GO:GO:0003713
GO:GO:0004386 HSSP:Q97XQ5 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:AC106886 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 PROSITE:PS51204 GO:GO:0004402
EMBL:AC093249 EMBL:AK128030 EMBL:AB002307 EMBL:BC159099
EMBL:AF143946 IPI:IPI00009101 IPI:IPI00444046 IPI:IPI00550342
RefSeq:NP_006653.2 UniGene:Hs.647334 ProteinModelPortal:Q6ZRS2
SMR:Q6ZRS2 IntAct:Q6ZRS2 MINT:MINT-123408 STRING:Q6ZRS2
PhosphoSite:Q6ZRS2 DMDM:296452947 PaxDb:Q6ZRS2 PRIDE:Q6ZRS2
DNASU:10847 Ensembl:ENST00000262518 Ensembl:ENST00000344771
Ensembl:ENST00000380361 Ensembl:ENST00000395059 GeneID:10847
KEGG:hsa:10847 UCSC:uc002dze.1 UCSC:uc002dzg.1 CTD:10847
GeneCards:GC16P030710 H-InvDB:HIX0012970 HGNC:HGNC:16974
HPA:HPA028929 MIM:136140 MIM:611421 neXtProt:NX_Q6ZRS2
Orphanet:2044 PharmGKB:PA162404706 HOGENOM:HOG000168717
InParanoid:Q6ZRS2 KO:K11661 OMA:LGTGNPQ OrthoDB:EOG4B2SWB
ChiTaRS:SRCAP GenomeRNAi:10847 NextBio:41182 ArrayExpress:Q6ZRS2
Bgee:Q6ZRS2 CleanEx:HS_SRCAP Genevestigator:Q6ZRS2 Uniprot:Q6ZRS2
Length = 3230
Score = 1318 (469.0 bits), Expect = 1.9e-239, Sum P(5) = 1.9e-239
Identities = 233/327 (71%), Positives = 282/327 (86%)
Query: 432 QPTGITFSTTQVRTKFPFLLKFPLREYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTI 491
QP G T +TTQV+T P LL+ LREYQHIGLDWLVTMYEK+LNGILADEMGLGKTI TI
Sbjct: 595 QPKGYTLATTQVKTPIPLLLRGQLREYQHIGLDWLVTMYEKKLNGILADEMGLGKTIQTI 654
Query: 492 AMLAHLACEKGIWGPHLIVVPTSVMLNWETEFLKWCPAFKILTYFGSAKERKFKRQGWLK 551
++LAHLACEKG WGPHLI+VPTSVMLNWE E +WCP+FKILTY+G+ KERK KRQGW K
Sbjct: 655 SLLAHLACEKGNWGPHLIIVPTSVMLNWEMELKRWCPSFKILTYYGAQKERKLKRQGWTK 714
Query: 552 PNSFHVCITTYRLIIQDSKVFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLT 611
PN+FHVCIT+Y+L++QD + F+RK W+YLILDEA IKN+KSQRWQ+LLNFNS+RR+LLT
Sbjct: 715 PNAFHVCITSYKLVLQDHQAFRRKNWRYLILDEAQNIKNFKSQRWQSLLNFNSQRRLLLT 774
Query: 612 GTPLQNDLMELWSLMHFLMPHIFQSHQEFKDWFCNPISGMVEGQEKVNKEVVDRLHNVLR 671
GTPLQN LMELWSLMHFLMPH+FQSH+EFK+WF NP++GM+EG ++ N+ +V RLH VLR
Sbjct: 775 GTPLQNSLMELWSLMHFLMPHVFQSHREFKEWFSNPLTGMIEGSQEYNEGLVKRLHKVLR 834
Query: 672 PFILRRLKRDVEKQLPMKQEHVIYCRLSKRQRNLYEDFIASSETQATLASANFFGMISVI 731
PF+LRR+K DVEKQ+P K EHVI CRLSKRQR LY+DF+A + T+ TLA+ +F +I+++
Sbjct: 835 PFLLRRVKVDVEKQMPKKYEHVIRCRLSKRQRCLYDDFMAQTTTKETLATGHFMSVINIL 894
Query: 732 MQLRKVCNHPDLFEGRPIVSSFDMSGI 758
MQLRKVCNHP+LF+ RP+ S F GI
Sbjct: 895 MQLRKVCNHPNLFDPRPVTSPFITPGI 921
Score = 824 (295.1 bits), Expect = 1.9e-239, Sum P(5) = 1.9e-239
Identities = 175/380 (46%), Positives = 233/380 (61%)
Query: 874 PVYSTSLRELLTVKHPVCDILQQKTVRRSY----LYSSKLADIVLSPVERFQRMIGLVES 929
PVY T + + T+ PV + ++ S+ Y+ VL P +R ++ ++E
Sbjct: 1916 PVYGTEVLDFCTLPQPVASPIGPRSPGPSHPTFWTYTEAAHRAVLFPQQRLDQLSEIIER 1975
Query: 930 FMFAIPAARAPAPVCW-CSKSGASVFLQPTYKEKCSEVLSPLLFPIRPAIVRRQVYFPDR 988
F+F +P AP P C Q ++E+ + L P P+ + + FPD
Sbjct: 1976 FIFVMPPVEAPPPSLHACHPPPWLAPRQAAFQEQLASELWPRARPLHRIVCNMRTQFPDL 2035
Query: 989 RLIQFDCGKLQELAILLRKLKSDGHRALIFTQMTKMLDILEEFISLYGYTYMRLDGSTQP 1048
RLIQ+DCGKLQ LA+LLR+LK++GHR LIFTQMT+MLD+LE+F++ +G+ Y+RLDGST+
Sbjct: 2036 RLIQYDCGKLQTLAVLLRQLKAEGHRVLIFTQMTRMLDVLEQFLTYHGHLYLRLDGSTRV 2095
Query: 1049 EERQTLMQRFNTNPKIFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQDRCHRI 1108
E+RQ LM+RFN + +IF FILSTRSGGVG+NL GADTV+FYDSDWNP MD QAQDRCHRI
Sbjct: 2096 EQRQALMERFNADKRIFCFILSTRSGGVGVNLTGADTVVFYDSDWNPTMDAQAQDRCHRI 2155
Query: 1109 GQTREVHIYRLISESTIEENILKKANQKRALDDLVIQSGGYNTEFFKKLDPMELFSGHRT 1168
GQTR+VHIYRLISE T+EENILKKANQKR L D+ I+ G + T +FK+ ELF
Sbjct: 2156 GQTRDVHIYRLISERTVEENILKKANQKRMLGDMAIEGGNFTTAYFKQQTIRELFDMPLE 2215
Query: 1169 LPMKTMQKEKAINNGNEVSLSNADV-EAALKCVEDEADYMALKRAEQEEAVDNQEFTE-- 1225
P + V+ + E AL EDE D A +A+ E+ + EF E
Sbjct: 2216 EPSSSSVPSAPEEEEETVASKQTHILEQALCRAEDEEDIRAATQAKAEQVAELAEFNEND 2275
Query: 1226 -------EAVGRP--EDDEL 1236
E GRP ED+E+
Sbjct: 2276 GFPAGEGEEAGRPGAEDEEM 2295
Score = 179 (68.1 bits), Expect = 1.9e-239, Sum P(5) = 1.9e-239
Identities = 37/112 (33%), Positives = 67/112 (59%)
Query: 22 VAVNISKDVKKFWMKIEKLVLYKHQMEVDVRKKKALDKQLEFLLGQTERYSSMLAENLVD 81
+A ++KDV++FW +EK+V +K Q ++ ++KKALD L+F++GQTE+YS +L+++L
Sbjct: 194 IASTMAKDVRQFWSNVEKVVQFKQQSRLEEKRKKALDLHLDFIVGQTEKYSDLLSQSL-- 251
Query: 82 SHKPVQQSPMREQPGIQYKEADENGAEEPGVQSKEADEDDAEQHSGFEPQLD 133
++P+ S P + + A P + D++D + F+PQ D
Sbjct: 252 -NQPLTSSKAGSSPCL----GSSSAASSPPPPASRLDDEDGD----FQPQED 294
Score = 65 (27.9 bits), Expect = 1.9e-239, Sum P(5) = 1.9e-239
Identities = 15/52 (28%), Positives = 31/52 (59%)
Query: 1302 EAISSFENQLRPIDRYAIRFLEL-WDPIIDKTAVESEVKFEEREWELDRIEK 1352
+ I++ QL PI+RYA++FLE + + + ++E + E +LD+ ++
Sbjct: 2300 QEIAALVEQLTPIERYAMKFLEASLEEVSREELKQAEEQVEAARKDLDQAKE 2351
Score = 63 (27.2 bits), Expect = 1.9e-239, Sum P(5) = 1.9e-239
Identities = 17/54 (31%), Positives = 23/54 (42%)
Query: 285 EQEDGDFVVATGXXXXXXXXXXXXXXXXXXDSNNYIDEIALLQKESEIPVEELL 338
+ EDGDF D+ EI LL++E E+P+EELL
Sbjct: 283 DDEDGDFQPQEDEEEDDEETIEVEEQQEGNDAEAQRREIELLRREGELPLEELL 336
Score = 63 (27.2 bits), Expect = 1.9e-239, Sum P(5) = 1.9e-239
Identities = 31/118 (26%), Positives = 51/118 (43%)
Query: 180 DIPLQELLKRYA-VDKVGRESSAEMGEDEAEPTVVE---EGHVQGNGNDLLAGSKLDTSG 235
++ ++ELL++YA G SS + EDE + + EG V+ S S
Sbjct: 441 ELSMEELLQQYAGAYAPGSGSSEDEDEDEVDANSSDCEPEGPVEAEEPPQEDSSS--QSD 498
Query: 236 SLVRRCDEINGGLSISENHLLDIETSQVRDTSKKSGASTQKQALYDFSDEQEDGDFVV 293
S+ R ++ S E S+ ++ + A +Q QA +E+ED DF V
Sbjct: 499 SVEDRSEDEEDEHS-EEEETSGSSASEESESEESEDAQSQSQA----DEEEEDDDFGV 551
Score = 58 (25.5 bits), Expect = 5.0e-10, Sum P(5) = 5.0e-10
Identities = 26/106 (24%), Positives = 43/106 (40%)
Query: 1176 KEKAINNGNEVSLSNADVEAALKCVEDEADYMALKRAEQEEAVDNQEFTEEAVGRPEDDE 1235
+E + + + V + D E E+ + A + +E EE+ D Q +A EDD+
Sbjct: 490 QEDSSSQSDSVEDRSEDEEDEHSEEEETSGSSASEESESEESEDAQS-QSQADEEEEDDD 548
Query: 1236 LVIEDTVRTDEPTDQGGCMTANNDNGMMLTGNDPKEERALTFAAKE 1281
+E + DE + + G G PK+E AA E
Sbjct: 549 FGVEYLLARDEEQSEADAGSGPPTPGPTTLG--PKKEITDIAAAAE 592
Score = 54 (24.1 bits), Expect = 2.4e-222, Sum P(4) = 2.4e-222
Identities = 14/61 (22%), Positives = 29/61 (47%)
Query: 77 ENLVDSHKPVQQSPMREQPGIQYK---EADENGAEEPGVQSKEADEDDAEQHSGFEPQLD 133
E V++ +P Q+ + ++ + E DE+ EE S ++E ++E+ + Q
Sbjct: 480 EGPVEAEEPPQEDSSSQSDSVEDRSEDEEDEHSEEEETSGSSASEESESEESEDAQSQSQ 539
Query: 134 A 134
A
Sbjct: 540 A 540
Score = 48 (22.0 bits), Expect = 1.6e-06, Sum P(5) = 1.6e-06
Identities = 14/51 (27%), Positives = 24/51 (47%)
Query: 1450 EEPSVEPMSID--DDFYDEDATFSDAMSPPSTSQKKRKKAELALYDDEERE 1498
+ SVE S D D+ +E+ T + S S S++ + D+EE +
Sbjct: 496 QSDSVEDRSEDEEDEHSEEEETSGSSASEESESEESEDAQSQSQADEEEED 546
Score = 47 (21.6 bits), Expect = 9.1e-238, Sum P(5) = 9.1e-238
Identities = 9/20 (45%), Positives = 15/20 (75%)
Query: 322 EIALLQKESEIPVEELLARY 341
E++ L +E E+ +EELL +Y
Sbjct: 432 ELSELAREGELSMEELLQQY 451
Score = 46 (21.3 bits), Expect = 1.7e-221, Sum P(4) = 1.7e-221
Identities = 11/43 (25%), Positives = 17/43 (39%)
Query: 87 QQSPMREQPGIQYKEADENGAEEPGVQSKEADEDDAEQHSGFE 129
+ S E G E E+ E +ADE++ + G E
Sbjct: 510 EHSEEEETSGSSASEESESEESEDAQSQSQADEEEEDDDFGVE 552
Score = 45 (20.9 bits), Expect = 3.4e-08, Sum P(3) = 3.4e-08
Identities = 13/47 (27%), Positives = 23/47 (48%)
Query: 1201 EDEADYMALKRAEQEEAVDNQEFTEEAVGRPEDDELVIEDTVRTDEP 1247
E+E D ++ EQ+E D + E + EL +E+ +R+ P
Sbjct: 295 EEEDDEETIEVEEQQEGNDAEAQRREIELLRREGELPLEELLRSLPP 341
Score = 43 (20.2 bits), Expect = 3.9e-225, Sum P(5) = 3.9e-225
Identities = 14/53 (26%), Positives = 24/53 (45%)
Query: 72 SSMLAENLVDSHKPVQQSPMREQPGIQYKEADENGAEEPGVQSKEADE-DDAE 123
S L + S P S + ++ G + DE +E ++ +E E +DAE
Sbjct: 263 SPCLGSSSAASSPPPPASRLDDEDGDFQPQEDEEEDDEETIEVEEQQEGNDAE 315
Score = 43 (20.2 bits), Expect = 3.5e-221, Sum P(4) = 3.5e-221
Identities = 12/28 (42%), Positives = 16/28 (57%)
Query: 106 GAEEPGVQSKE-ADEDDAEQHSG-FEPQ 131
GA PG S E DED+ + +S EP+
Sbjct: 453 GAYAPGSGSSEDEDEDEVDANSSDCEPE 480
Score = 42 (19.8 bits), Expect = 5.0e-10, Sum P(5) = 5.0e-10
Identities = 22/101 (21%), Positives = 47/101 (46%)
Query: 961 EKCSEVLSPLLFPIRP---AIVRR--QVYFPDRRLIQFDCGKLQ----ELAILLRK-LKS 1010
E+ +E P + I+P A+ +R Q + PD +F + + E I + L+
Sbjct: 366 EEGAEEEPPQVLEIKPPPSAVTQRNKQPWHPDEDDEEFTANEEEAEDEEDTIAAEEQLEG 425
Query: 1011 DGHRALIFTQMTKMLDI-LEEFISLYGYTYMRLDGSTQPEE 1050
+ A+ +++ + ++ +EE + Y Y GS++ E+
Sbjct: 426 EVDHAMELSELAREGELSMEELLQQYAGAYAPGSGSSEDED 466
Score = 41 (19.5 bits), Expect = 9.4e-07, Sum P(4) = 9.4e-07
Identities = 19/61 (31%), Positives = 29/61 (47%)
Query: 1890 SLSDSVKCPKSKLRKTSMEHSEIQHSSPEPVSNQSVA--TKDANLRFDLIQEAWLEDMDG 1947
S SDSV+ + EHSE + +S S +S + ++DA + +E ED D
Sbjct: 495 SQSDSVE---DRSEDEEDEHSEEEETSGSSASEESESEESEDAQSQSQADEEE--EDDDF 549
Query: 1948 G 1948
G
Sbjct: 550 G 550
Score = 40 (19.1 bits), Expect = 9.2e-06, Sum P(5) = 9.2e-06
Identities = 19/84 (22%), Positives = 28/84 (33%)
Query: 1458 SIDDDFYDEDATFSD--------AMSPPSTSQKKRKKAELALYDDEEREXXXXXXXXXXX 1509
S D+D + DA SD A PP + + +DEE E
Sbjct: 462 SEDEDEDEVDANSSDCEPEGPVEAEEPPQEDSSSQSDSVEDRSEDEEDEHSEEEETSGSS 521
Query: 1510 XXXPVRSPDSDSKLSRKRHDGSTE 1533
S +S+ S+ + D E
Sbjct: 522 ASEESESEESEDAQSQSQADEEEE 545
Score = 38 (18.4 bits), Expect = 7.6e-157, Sum P(5) = 7.6e-157
Identities = 7/10 (70%), Positives = 8/10 (80%)
Query: 934 IPAARAPAPV 943
IPA+R P PV
Sbjct: 1061 IPASRPPGPV 1070
Score = 38 (18.4 bits), Expect = 5.2e-154, Sum P(5) = 5.2e-154
Identities = 8/27 (29%), Positives = 18/27 (66%)
Query: 1555 GGKISITAMPVKRVLMIKPEKLKKGNV 1581
G K+++T V+++ + +P L++ NV
Sbjct: 1213 GNKLTLTGAQVRQLAVGQPRPLQR-NV 1238
Score = 38 (18.4 bits), Expect = 1.4e-05, Sum P(5) = 1.4e-05
Identities = 9/40 (22%), Positives = 20/40 (50%)
Query: 1449 KEEPSVEPMSIDDDFYDEDATFSDAMSPPSTSQKKRKKAE 1488
+E+ S + S++D DE+ S+ +S + ++E
Sbjct: 490 QEDSSSQSDSVEDRSEDEEDEHSEEEETSGSSASEESESE 529
>UNIPROTKB|E1BC33 [details] [associations]
symbol:LOC788113 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0043234 "protein complex" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR017956 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
SMART:SM00384 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0005794 GO:GO:0043234 GO:GO:0003677 InterPro:IPR020478
PRINTS:PR00929 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529
PROSITE:PS51204 GeneTree:ENSGT00530000063427 OMA:LGTGNPQ
EMBL:DAAA02057908 IPI:IPI00705506 Ensembl:ENSBTAT00000018503
Uniprot:E1BC33
Length = 3242
Score = 1318 (469.0 bits), Expect = 4.4e-239, Sum P(6) = 4.4e-239
Identities = 233/327 (71%), Positives = 282/327 (86%)
Query: 432 QPTGITFSTTQVRTKFPFLLKFPLREYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTI 491
QP G T +TTQV+T P LL+ LREYQHIGLDWLVTMYEK+LNGILADEMGLGKTI TI
Sbjct: 603 QPKGYTLATTQVKTPIPLLLRGQLREYQHIGLDWLVTMYEKKLNGILADEMGLGKTIQTI 662
Query: 492 AMLAHLACEKGIWGPHLIVVPTSVMLNWETEFLKWCPAFKILTYFGSAKERKFKRQGWLK 551
++LAHLACEKG WGPHLI+VPTSVMLNWE E +WCP+FKILTY+G+ KERK KRQGW K
Sbjct: 663 SLLAHLACEKGNWGPHLIIVPTSVMLNWEMELKRWCPSFKILTYYGAQKERKLKRQGWTK 722
Query: 552 PNSFHVCITTYRLIIQDSKVFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLT 611
PN+FHVCIT+Y+L++QD + F+RK W+YLILDEA IKN+KSQRWQ+LLNFNS+RR+LLT
Sbjct: 723 PNAFHVCITSYKLVLQDHQAFRRKNWRYLILDEAQNIKNFKSQRWQSLLNFNSQRRLLLT 782
Query: 612 GTPLQNDLMELWSLMHFLMPHIFQSHQEFKDWFCNPISGMVEGQEKVNKEVVDRLHNVLR 671
GTPLQN LMELWSLMHFLMPH+FQSH+EFK+WF NP++GM+EG ++ N+ +V RLH VLR
Sbjct: 783 GTPLQNSLMELWSLMHFLMPHVFQSHREFKEWFSNPLTGMIEGSQEYNEGLVKRLHKVLR 842
Query: 672 PFILRRLKRDVEKQLPMKQEHVIYCRLSKRQRNLYEDFIASSETQATLASANFFGMISVI 731
PF+LRR+K DVEKQ+P K EHVI CRLSKRQR LY+DF+A + T+ TLA+ +F +I+++
Sbjct: 843 PFLLRRVKVDVEKQMPKKYEHVIRCRLSKRQRCLYDDFMAQTTTKETLATGHFMSVINIL 902
Query: 732 MQLRKVCNHPDLFEGRPIVSSFDMSGI 758
MQLRKVCNHP+LF+ RP+ S F GI
Sbjct: 903 MQLRKVCNHPNLFDPRPVTSPFITPGI 929
Score = 826 (295.8 bits), Expect = 4.4e-239, Sum P(6) = 4.4e-239
Identities = 175/380 (46%), Positives = 234/380 (61%)
Query: 874 PVYSTSLRELLTVKHPVCDILQQKTVRRSY----LYSSKLADIVLSPVERFQRMIGLVES 929
PVY T + + T+ PV + ++ S+ Y+ VL P +R ++ ++E
Sbjct: 1927 PVYGTEVLDFCTLPQPVASPIGPRSPGPSHPTFWTYTEAARQAVLFPQQRLDQLSEIIER 1986
Query: 930 FMFAIPAARAPAPVCW-CSKSGASVFLQPTYKEKCSEVLSPLLFPIRPAIVRRQVYFPDR 988
F+F +P AP P C Q ++E+ + L P P+ + + FPD
Sbjct: 1987 FIFVMPPVEAPPPSLHACHPPPWLAPRQAAFQEQLARELWPRARPLHRIVCNMRTQFPDL 2046
Query: 989 RLIQFDCGKLQELAILLRKLKSDGHRALIFTQMTKMLDILEEFISLYGYTYMRLDGSTQP 1048
RLIQ+DCGKLQ LA+LLR+LK++GHR LIFTQMT+MLD+LE+F++ +G+ Y+RLDGST+
Sbjct: 2047 RLIQYDCGKLQTLAVLLRQLKAEGHRVLIFTQMTRMLDVLEQFLTYHGHLYLRLDGSTRV 2106
Query: 1049 EERQTLMQRFNTNPKIFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQDRCHRI 1108
E+RQ LM+RFN + +IF FILSTRSGGVG+NL GADTV+FYDSDWNP MD QAQDRCHRI
Sbjct: 2107 EQRQALMERFNADKRIFCFILSTRSGGVGVNLTGADTVVFYDSDWNPTMDAQAQDRCHRI 2166
Query: 1109 GQTREVHIYRLISESTIEENILKKANQKRALDDLVIQSGGYNTEFFKKLDPMELFSGHRT 1168
GQTR+VHIYRLISE T+EENILKKANQKR L D+ I+ G + T +FK+ ELF
Sbjct: 2167 GQTRDVHIYRLISERTVEENILKKANQKRMLGDMAIEGGNFTTAYFKQQTIRELFDMPLE 2226
Query: 1169 LPMKTMQKEKAINNGNEVSLSNADV-EAALKCVEDEADYMALKRAEQEEAVDNQEFTE-- 1225
P + + V+ + E AL EDE D A +A+ E+ + EF E
Sbjct: 2227 EPSGSSVPSAPDDEEETVASKQTHILEQALCRAEDEEDIRAATQAKAEQVAELAEFNEND 2286
Query: 1226 -------EAVGRP--EDDEL 1236
E GRP ED+E+
Sbjct: 2287 GFTAGEGEEAGRPGAEDEEM 2306
Score = 167 (63.8 bits), Expect = 4.4e-239, Sum P(6) = 4.4e-239
Identities = 35/110 (31%), Positives = 64/110 (58%)
Query: 22 VAVNISKDVKKFWMKIEKLVLYKHQMEVDVRKKKALDKQLEFLLGQTERYSSMLAENLVD 81
+A ++KDV++FW +EK+V +K Q ++ ++KKALD L+F++GQTE+YS +L+++L
Sbjct: 194 IASAMAKDVRQFWSNVEKVVQFKQQSRLEEKRKKALDLHLDFIVGQTEKYSDLLSQSL-- 251
Query: 82 SHKPVQQSPMREQPGIQYKEADENGAEEPGVQSKEADEDDAEQHSGFEPQ 131
++P+ S P + + A P D++ + F+PQ
Sbjct: 252 -NQPLASSKAGSSPCL----GSSSAASSPPPPGSRMDDEAID--GDFQPQ 294
Score = 66 (28.3 bits), Expect = 1.1e-238, Sum P(5) = 1.1e-238
Identities = 32/123 (26%), Positives = 52/123 (42%)
Query: 180 DIPLQELLKRYA------VDKVGRESSAEMGEDEAEPTVVEEGHVQGNGNDLLAGSKLDT 233
++ ++ELL+RYA G SS E EDE E + G + +
Sbjct: 442 ELSMEELLQRYAGAYASDASAPGSGSSEEEDEDEVE---ANSSDCEPEGATEAEEAPQED 498
Query: 234 SGSLVRRCDEINGGLSISENHLLDIETSQVRDTSK---KSGASTQKQALYDFSDEQEDGD 290
S S +E + E H + ETS+ ++ + + +Q Q+ D +E+ED D
Sbjct: 499 SSSQSDSAEEQSE--DEDEEHSEEEETSESSESEESESEESEESQSQSQAD-EEEEEDDD 555
Query: 291 FVV 293
F V
Sbjct: 556 FGV 558
Score = 65 (27.9 bits), Expect = 4.4e-239, Sum P(6) = 4.4e-239
Identities = 15/52 (28%), Positives = 31/52 (59%)
Query: 1302 EAISSFENQLRPIDRYAIRFLEL-WDPIIDKTAVESEVKFEEREWELDRIEK 1352
+ I++ QL PI+RYA++FLE + + + ++E + E +LD+ ++
Sbjct: 2311 QEIAALVEQLTPIERYAMKFLEASLEEVSREELKQAEEQVEAARKDLDQAKE 2362
Score = 65 (27.9 bits), Expect = 1.1e-223, Sum P(4) = 1.1e-223
Identities = 21/69 (30%), Positives = 27/69 (39%)
Query: 270 SGASTQKQALYDFSDEQEDGDFVVATGXXXXXXXXXXXXXXXXXXDSNNYIDEIALLQKE 329
S AS+ DE DGDF D+ EI LL++E
Sbjct: 270 SAASSPPPPGSRMDDEAIDGDFQPQEEEEEDDEETIEVEEQQEGNDAETQRREIELLRRE 329
Query: 330 SEIPVEELL 338
E+P+EELL
Sbjct: 330 GELPLEELL 338
Score = 52 (23.4 bits), Expect = 0.00013, Sum P(5) = 0.00013
Identities = 14/57 (24%), Positives = 29/57 (50%)
Query: 1442 TSESKAVKEEPSVEPMSIDDDFYDEDATFSDAMSPPSTSQKKRKKAELALYDDEERE 1498
+S+S + +E+ E D++ +E+ T + S S S++ + + D+EE E
Sbjct: 500 SSQSDSAEEQSEDE----DEEHSEEEETSESSESEESESEESEESQSQSQADEEEEE 552
Score = 51 (23.0 bits), Expect = 4.4e-239, Sum P(6) = 4.4e-239
Identities = 10/20 (50%), Positives = 15/20 (75%)
Query: 322 EIALLQKESEIPVEELLARY 341
E++ L +E E+ +EELL RY
Sbjct: 433 ELSELAREGELSMEELLQRY 452
Score = 50 (22.7 bits), Expect = 4.0e-222, Sum P(4) = 4.0e-222
Identities = 14/36 (38%), Positives = 20/36 (55%)
Query: 98 QYKEADENGAEEPGV-QSKEADEDDAEQHSG-FEPQ 131
+Y A + A PG S+E DED+ E +S EP+
Sbjct: 451 RYAGAYASDASAPGSGSSEEEDEDEVEANSSDCEPE 486
Score = 50 (22.7 bits), Expect = 1.8e-07, Sum P(3) = 1.8e-07
Identities = 15/52 (28%), Positives = 25/52 (48%)
Query: 1201 EDEADYMALKRAEQEEAVDNQEFTEEAVGRPEDDELVIEDTVRTDEPTDQGG 1252
E+E D ++ EQ+E D + E + EL +E+ +R+ P GG
Sbjct: 297 EEEDDEETIEVEEQQEGNDAETQRREIELLRREGELPLEELLRSLPPQLLGG 348
Score = 50 (22.7 bits), Expect = 5.9e-07, Sum P(5) = 5.9e-07
Identities = 13/54 (24%), Positives = 27/54 (50%)
Query: 1201 EDEADYMALKRAEQEEAVDNQEFTEEAVGRPEDDELVIEDTVRTDEPTDQ--GG 1252
E+ ++ + +E EE+ ++Q ++ EDD+ +E + DE + GG
Sbjct: 521 EETSESSESEESESEESEESQSQSQADEEEEEDDDFGVEYLLARDEEQSEADGG 574
Score = 48 (22.0 bits), Expect = 6.6e-222, Sum P(4) = 6.6e-222
Identities = 13/39 (33%), Positives = 22/39 (56%)
Query: 101 EADENGAEEPGVQSKEADE---DDAEQHSGFEPQLDAAD 136
EA+E E+ QS A+E D+ E+HS E ++++
Sbjct: 490 EAEEAPQEDSSSQSDSAEEQSEDEDEEHSEEEETSESSE 528
Score = 48 (22.0 bits), Expect = 0.00031, Sum P(5) = 0.00031
Identities = 22/91 (24%), Positives = 35/91 (38%)
Query: 1443 SESKAVKEEPSVEPMSIDDDFYDEDATFSDAMSPPSTSQKKRKKAELALYDDEEREXXXX 1502
S S ++E VE S D + E AT ++ +P S + AE +DE+ E
Sbjct: 465 SGSSEEEDEDEVEANSSDCE--PEGATEAEE-APQEDSSSQSDSAE-EQSEDEDEEHSEE 520
Query: 1503 XXXXXXXXXXPVRSPDSDSKLSRKRHDGSTE 1533
S +S+ S+ + D E
Sbjct: 521 EETSESSESEESESEESEESQSQSQADEEEE 551
Score = 47 (21.6 bits), Expect = 8.4e-222, Sum P(4) = 8.4e-222
Identities = 10/34 (29%), Positives = 19/34 (55%)
Query: 101 EADENGAEEPGVQSKEADEDDAEQHSGFEPQLDA 134
E +E+ EE +S E++E ++E+ + Q A
Sbjct: 513 EDEEHSEEEETSESSESEESESEESEESQSQSQA 546
Score = 47 (21.6 bits), Expect = 0.00039, Sum P(5) = 0.00039
Identities = 11/47 (23%), Positives = 23/47 (48%)
Query: 1442 TSESKAVKEEPSVEPMSIDDDFYDEDATFSDAMSPPSTSQKKRKKAE 1488
T +A +E+ S + S ++ DED S+ +S+ + ++E
Sbjct: 489 TEAEEAPQEDSSSQSDSAEEQSEDEDEEHSEEEETSESSESEESESE 535
Score = 45 (20.9 bits), Expect = 1.8e-06, Sum P(5) = 1.8e-06
Identities = 22/94 (23%), Positives = 38/94 (40%)
Query: 1179 AINNGNEVSLSNADVEAALKCVEDEADYMALKRAEQEEAVDNQEFTEEAVGRPEDDELVI 1238
A +G+ +VEA E E A + A QE++ + EE ED+E
Sbjct: 462 APGSGSSEEEDEDEVEANSSDCEPEGATEA-EEAPQEDSSSQSDSAEEQ-SEDEDEEHSE 519
Query: 1239 EDTVRTDEPTDQGGCMTANNDNGMMLTGNDPKEE 1272
E+ T E ++ + ++ + D +EE
Sbjct: 520 EE--ETSESSESEESESEESEESQSQSQADEEEE 551
Score = 42 (19.8 bits), Expect = 4.4e-239, Sum P(6) = 4.4e-239
Identities = 14/61 (22%), Positives = 27/61 (44%)
Query: 180 DIPLQELLKRYAVDKVGRESSAEMGEDEAEPTVVEEGHVQGNGNDLLAGSKLDTSGSLVR 239
++PL+ELL+ +G SS G + + +G +G + K+ S+ +
Sbjct: 331 ELPLEELLRSLPPQLLGGPSSPS-GTPSSHESDTRDGPEEGGEEEPSQVLKVKPPPSVTQ 389
Query: 240 R 240
R
Sbjct: 390 R 390
Score = 41 (19.5 bits), Expect = 3.6e-221, Sum P(4) = 3.6e-221
Identities = 13/54 (24%), Positives = 29/54 (53%)
Query: 72 SSMLAENLVDSHKPVQQSPMREQPGIQYKEADENGAEEPGV-QSK-EADEDDAE 123
SS +++ + + + E+ + E++E+ +EE QS+ +ADE++ E
Sbjct: 499 SSSQSDSAEEQSEDEDEEHSEEEETSESSESEESESEESEESQSQSQADEEEEE 552
Score = 38 (18.4 bits), Expect = 7.4e-221, Sum P(4) = 7.4e-221
Identities = 12/59 (20%), Positives = 30/59 (50%)
Query: 69 ERYSSMLAENLVDSHKPVQQSPMREQPGIQYKEADENGAEEPGVQSKEADEDDAEQHSG 127
E +S +E+ + ++S + Q + +E D+ G E + +++ ++ +A+ SG
Sbjct: 520 EEETSESSESEESESEESEESQSQSQADEEEEEDDDFGVEY--LLARDEEQSEADGGSG 576
Score = 38 (18.4 bits), Expect = 7.0e-156, Sum P(5) = 7.0e-156
Identities = 7/10 (70%), Positives = 8/10 (80%)
Query: 934 IPAARAPAPV 943
IPA+R P PV
Sbjct: 1069 IPASRPPGPV 1078
Score = 38 (18.4 bits), Expect = 4.7e-153, Sum P(5) = 4.7e-153
Identities = 8/27 (29%), Positives = 18/27 (66%)
Query: 1555 GGKISITAMPVKRVLMIKPEKLKKGNV 1581
G K+++T V+++ + +P L++ NV
Sbjct: 1221 GNKLTLTGAQVRQLAVGQPRPLQR-NV 1246
Score = 37 (18.1 bits), Expect = 9.5e-236, Sum P(5) = 9.5e-236
Identities = 9/20 (45%), Positives = 13/20 (65%)
Query: 1270 KEERALTFAAKEDDVDMLAD 1289
K E ++ A +DD+D LAD
Sbjct: 3092 KSEGSMVVAVIQDDLD-LAD 3110
>UNIPROTKB|F1RG74 [details] [associations]
symbol:SRCAP "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043234 "protein complex" evidence=IEA] [GO:0005794
"Golgi apparatus" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR017956
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00384
SMART:SM00490 GO:GO:0005524 GO:GO:0005634 GO:GO:0005794
GO:GO:0043234 GO:GO:0003677 InterPro:IPR020478 PRINTS:PR00929
GO:GO:0004386 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529 PROSITE:PS51204
GeneTree:ENSGT00530000063427 OMA:LGTGNPQ EMBL:FP102572
Ensembl:ENSSSCT00000008537 Uniprot:F1RG74
Length = 3230
Score = 1318 (469.0 bits), Expect = 3.5e-238, Sum P(5) = 3.5e-238
Identities = 233/327 (71%), Positives = 282/327 (86%)
Query: 432 QPTGITFSTTQVRTKFPFLLKFPLREYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTI 491
QP G T +TTQV+T P LL+ LREYQHIGLDWLVTMYEK+LNGILADEMGLGKTI TI
Sbjct: 602 QPKGYTLATTQVKTPIPLLLRGQLREYQHIGLDWLVTMYEKKLNGILADEMGLGKTIQTI 661
Query: 492 AMLAHLACEKGIWGPHLIVVPTSVMLNWETEFLKWCPAFKILTYFGSAKERKFKRQGWLK 551
++LAHLACEKG WGPHLI+VPTSVMLNWE E +WCP+FKILTY+G+ KERK KRQGW K
Sbjct: 662 SLLAHLACEKGNWGPHLIIVPTSVMLNWEMELKRWCPSFKILTYYGAQKERKLKRQGWTK 721
Query: 552 PNSFHVCITTYRLIIQDSKVFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLT 611
PN+FHVCIT+Y+L++QD + F+RK W+YLILDEA IKN+KSQRWQ+LLNFNS+RR+LLT
Sbjct: 722 PNAFHVCITSYKLVLQDHQAFRRKNWRYLILDEAQNIKNFKSQRWQSLLNFNSQRRLLLT 781
Query: 612 GTPLQNDLMELWSLMHFLMPHIFQSHQEFKDWFCNPISGMVEGQEKVNKEVVDRLHNVLR 671
GTPLQN LMELWSLMHFLMPH+FQSH+EFK+WF NP++GM+EG ++ N+ +V RLH VLR
Sbjct: 782 GTPLQNSLMELWSLMHFLMPHVFQSHREFKEWFSNPLTGMIEGSQEYNEGLVKRLHKVLR 841
Query: 672 PFILRRLKRDVEKQLPMKQEHVIYCRLSKRQRNLYEDFIASSETQATLASANFFGMISVI 731
PF+LRR+K DVEKQ+P K EHVI CRLSKRQR LY+DF+A + T+ TLA+ +F +I+++
Sbjct: 842 PFLLRRVKVDVEKQMPKKYEHVIRCRLSKRQRCLYDDFMAQTTTKETLATGHFMSVINIL 901
Query: 732 MQLRKVCNHPDLFEGRPIVSSFDMSGI 758
MQLRKVCNHP+LF+ RP+ S F GI
Sbjct: 902 MQLRKVCNHPNLFDPRPVTSPFITPGI 928
Score = 822 (294.4 bits), Expect = 3.5e-238, Sum P(5) = 3.5e-238
Identities = 175/380 (46%), Positives = 234/380 (61%)
Query: 874 PVYSTSLRELLTVKHPVCDILQQKTVRRSY----LYSSKLADIVLSPVERFQRMIGLVES 929
PVY T + + T+ PV + ++ S+ Y+ VL P +R ++ ++E
Sbjct: 1916 PVYGTEVLDFCTLPQPVASPIGPRSPGPSHPTFWTYTEAARQAVLFPQQRLDQLSEIIER 1975
Query: 930 FMFAIPAARAPAPVCW-CSKSGASVFLQPTYKEKCSEVLSPLLFPIRPAIVRRQVYFPDR 988
F+F +P AP P C Q ++E+ + L P P+ + + FPD
Sbjct: 1976 FIFVMPPVEAPPPSLHACHPPPWLAPRQAAFQEQLACELWPRARPLHRIVCNMRTQFPDL 2035
Query: 989 RLIQFDCGKLQELAILLRKLKSDGHRALIFTQMTKMLDILEEFISLYGYTYMRLDGSTQP 1048
RLIQ+DCGKLQ LA+LLR+LK++GHR LIFTQMT+MLD+LE+F++ +G+ Y+RLDGST+
Sbjct: 2036 RLIQYDCGKLQTLAVLLRQLKAEGHRVLIFTQMTRMLDVLEQFLTYHGHLYLRLDGSTRV 2095
Query: 1049 EERQTLMQRFNTNPKIFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQDRCHRI 1108
E+RQ LM+RFN + +IF FILSTRSGGVG+NL GADTV+FYDSDWNP MD QAQDRCHRI
Sbjct: 2096 EQRQALMERFNADKRIFCFILSTRSGGVGVNLTGADTVVFYDSDWNPTMDAQAQDRCHRI 2155
Query: 1109 GQTREVHIYRLISESTIEENILKKANQKRALDDLVIQSGGYNTEFFKKLDPMELFSGHRT 1168
GQTR+VHIYRLISE T+EENILKKANQKR L D+ I+ G + T +FK+ ELF
Sbjct: 2156 GQTRDVHIYRLISERTVEENILKKANQKRMLGDMAIEGGNFTTAYFKQQTIRELFDMPLE 2215
Query: 1169 LPMKTMQKEKAINNGNEVSLSNADV-EAALKCVEDEADYMALKRAEQEEAVDNQEFTE-- 1225
P + + V+ + E AL EDE D A +A+ E+ + EF E
Sbjct: 2216 EPSGSSVPSAPEDEEETVASKQTHILEQALCRAEDEEDIRAATQAKAEQVAELAEFNEND 2275
Query: 1226 -------EAVGRP--EDDEL 1236
E GRP ED+E+
Sbjct: 2276 GFPAGEGEEAGRPGAEDEEM 2295
Score = 170 (64.9 bits), Expect = 3.5e-238, Sum P(5) = 3.5e-238
Identities = 36/115 (31%), Positives = 66/115 (57%)
Query: 22 VAVNISKDVKKFWMKIEKLVLYKHQMEVDVRKKKALDKQLEFLLGQTERYSSMLAENLVD 81
+A ++KDV++FW +EK+V +K Q ++ ++KKALD L+F++GQTE+YS +L+++L
Sbjct: 194 IASTMAKDVRQFWSNVEKVVQFKQQSRLEEKRKKALDLHLDFIVGQTEKYSDLLSQSL-- 251
Query: 82 SHKPVQQSPMREQPGIQYKEADENGAEEPGVQSKEADEDDAEQHSGFEPQLDAAD 136
++P+ S P + + A P D++ + F+PQ + D
Sbjct: 252 -NQPLASSKAGSSPCL----GSSSAASSPPPPVSRMDDEAID--GDFQPQEEEED 299
Score = 65 (27.9 bits), Expect = 3.5e-238, Sum P(5) = 3.5e-238
Identities = 15/52 (28%), Positives = 31/52 (59%)
Query: 1302 EAISSFENQLRPIDRYAIRFLEL-WDPIIDKTAVESEVKFEEREWELDRIEK 1352
+ I++ QL PI+RYA++FLE + + + ++E + E +LD+ ++
Sbjct: 2300 QEIAALVEQLTPIERYAMKFLEASLEEVSREELKQAEEQVEAARKDLDQAKE 2351
Score = 62 (26.9 bits), Expect = 3.5e-238, Sum P(5) = 3.5e-238
Identities = 30/121 (24%), Positives = 53/121 (43%)
Query: 180 DIPLQELLKRYA------VDKVGRESSAEMGEDEAEPTVVEEGHVQGNGNDLLAGSKLDT 233
++ ++ELL++YA G SS E EDE E + + G + +
Sbjct: 442 ELSVEELLQQYAGAYASDASAPGSGSSEEEEEDEVE---ADSSESEPEGAAEAEEAPHED 498
Query: 234 SGSLVRRCDEINGGLSISENHLLDIETSQVRDTSK-KSGASTQKQALYDFSDEQEDGDFV 292
S S +E + + H + ETS+ ++ + +S S + Q+ +E+ED DF
Sbjct: 499 SSSQSDSAEEQSE--DEEDEHSEEEETSRSSESEESESEESEESQSQSQADEEEEDDDFG 556
Query: 293 V 293
V
Sbjct: 557 V 557
Score = 61 (26.5 bits), Expect = 7.1e-223, Sum P(4) = 7.1e-223
Identities = 21/69 (30%), Positives = 28/69 (40%)
Query: 270 SGASTQKQALYDFSDEQEDGDFVVATGXXXXXXXXXXXXXXXXXXDSNNYIDEIALLQKE 329
S AS+ + DE DGDF D+ EI LL++E
Sbjct: 270 SAASSPPPPVSRMDDEAIDGDFQPQE-EEEDDEETIEVEEQQEGNDAETQRLEIELLRRE 328
Query: 330 SEIPVEELL 338
E+P+EELL
Sbjct: 329 GELPLEELL 337
Score = 51 (23.0 bits), Expect = 8.1e-222, Sum P(4) = 8.1e-222
Identities = 11/34 (32%), Positives = 19/34 (55%)
Query: 101 EADENGAEEPGVQSKEADEDDAEQHSGFEPQLDA 134
E DE+ EE +S E++E ++E+ + Q A
Sbjct: 513 EEDEHSEEEETSRSSESEESESEESEESQSQSQA 546
Score = 48 (22.0 bits), Expect = 1.7e-221, Sum P(4) = 1.7e-221
Identities = 14/36 (38%), Positives = 19/36 (52%)
Query: 98 QYKEADENGAEEPGV-QSKEADEDDAEQHSG-FEPQ 131
QY A + A PG S+E +ED+ E S EP+
Sbjct: 451 QYAGAYASDASAPGSGSSEEEEEDEVEADSSESEPE 486
Score = 48 (22.0 bits), Expect = 1.4e-07, Sum P(3) = 1.4e-07
Identities = 17/54 (31%), Positives = 27/54 (50%)
Query: 1201 EDEADYMALKRAEQEEAVD--NQEFTEEAVGRPEDDELVIEDTVRTDEPTDQGG 1252
E+E D ++ EQ+E D Q E + R + EL +E+ +R+ P GG
Sbjct: 296 EEEDDEETIEVEEQQEGNDAETQRLEIELLRR--EGELPLEELLRSLPPQLLGG 347
Score = 48 (22.0 bits), Expect = 0.00010, Sum P(4) = 0.00010
Identities = 13/57 (22%), Positives = 29/57 (50%)
Query: 1442 TSESKAVKEEPSVEPMSIDDDFYDEDATFSDAMSPPSTSQKKRKKAELALYDDEERE 1498
+S+S + +E+ E +D+ +E+ T + S S S++ + + D+EE +
Sbjct: 500 SSQSDSAEEQSEDE----EDEHSEEEETSRSSESEESESEESEESQSQSQADEEEED 552
Score = 45 (20.9 bits), Expect = 1.9e-05, Sum P(5) = 1.9e-05
Identities = 13/45 (28%), Positives = 23/45 (51%)
Query: 1210 KRAEQEEAVDNQEFTEEAVGRPEDDELVIEDTVRTDEPTDQ--GG 1252
+ +E EE+ ++Q +A EDD+ +E + DE + GG
Sbjct: 530 EESESEESEESQS-QSQADEEEEDDDFGVEYLLARDEERSEADGG 573
Score = 44 (20.5 bits), Expect = 4.4e-221, Sum P(4) = 4.4e-221
Identities = 14/60 (23%), Positives = 31/60 (51%)
Query: 72 SSMLAENLVDSHKPVQQSPMREQPGIQYKEADENGAEEPGV-QSK-EADEDDAEQHSGFE 129
SS +++ + + + E+ + E++E+ +EE QS+ +ADE++ + G E
Sbjct: 499 SSSQSDSAEEQSEDEEDEHSEEEETSRSSESEESESEESEESQSQSQADEEEEDDDFGVE 558
Score = 44 (20.5 bits), Expect = 2.3e-05, Sum P(5) = 2.3e-05
Identities = 18/68 (26%), Positives = 28/68 (41%)
Query: 1179 AINNGNEVSLSNADVEAALKCVEDEADYMALKRAEQEEAVDNQEFTEEAVGRPEDDELVI 1238
A +G+ +VEA E E A + A E++ + EE ED+
Sbjct: 462 APGSGSSEEEEEDEVEADSSESEPEGAAEA-EEAPHEDSSSQSDSAEEQSEDEEDEHSEE 520
Query: 1239 EDTVRTDE 1246
E+T R+ E
Sbjct: 521 EETSRSSE 528
Score = 43 (20.2 bits), Expect = 5.6e-221, Sum P(4) = 5.6e-221
Identities = 11/29 (37%), Positives = 17/29 (58%)
Query: 101 EADENGAEEPGVQSKEADE---DDAEQHS 126
EA+E E+ QS A+E D+ ++HS
Sbjct: 490 EAEEAPHEDSSSQSDSAEEQSEDEEDEHS 518
Score = 42 (19.8 bits), Expect = 3.4e-222, Sum P(5) = 3.4e-222
Identities = 13/41 (31%), Positives = 20/41 (48%)
Query: 238 VRRCDE--INGGLSISENHLLDIETSQVRDTSKKSGASTQK 276
V R D+ I+G E D ET +V + + + A TQ+
Sbjct: 279 VSRMDDEAIDGDFQPQEEEEDDEETIEVEEQQEGNDAETQR 319
Score = 41 (19.5 bits), Expect = 1.6e-237, Sum P(6) = 1.6e-237
Identities = 15/64 (23%), Positives = 29/64 (45%)
Query: 180 DIPLQELLKRYAVDKVGRESSAEMGEDEAEPTVVEEGHVQGNGNDLLAGSKLDTSGSLVR 239
++PL+ELL+ +G SS + + ++G +G A K+ S V
Sbjct: 330 ELPLEELLRSLPPQLLGGPSSPSR-TPSSHDSDTQDGPEEGEEEPSQA-MKVKPPPSSVT 387
Query: 240 RCDE 243
+C++
Sbjct: 388 QCNK 391
Score = 41 (19.5 bits), Expect = 4.9e-158, Sum P(6) = 4.9e-158
Identities = 15/51 (29%), Positives = 19/51 (37%)
Query: 902 SYLYSSKLADIVLSPVERFQRMIGLVESFMFAIPAARAPAPVCWCSKSGAS 952
S L + + LSP IG V + A+ A AP S G S
Sbjct: 1776 SLLAPPSVQTLTLSPAPVSVPAIGPVATQTLALAPASTQAPASQASSLGVS 1826
Score = 41 (19.5 bits), Expect = 0.00048, Sum P(4) = 0.00048
Identities = 20/87 (22%), Positives = 34/87 (39%)
Query: 1471 SDAMSPPSTSQKKRKKAELALYDDEEREXXXXXXXXXXXXXXPVRSPDSDSKLSRKRHDG 1530
SDA +P S S ++ ++ E+ D E E DS + S D
Sbjct: 458 SDASAPGSGSSEEEEEDEVEA-DSSESEPEGAAEAEEAPHEDSSSQSDSAEEQSEDEEDE 516
Query: 1531 STE----LKTCESIFIDLEQKSASRSK 1553
+E ++ ES + E+ S+S+
Sbjct: 517 HSEEEETSRSSESEESESEESEESQSQ 543
Score = 40 (19.1 bits), Expect = 4.9e-158, Sum P(6) = 4.9e-158
Identities = 10/28 (35%), Positives = 11/28 (39%)
Query: 1088 FYDSDWNPAMDQQAQDRCHRIGQTREVH 1115
FY QQ +R RI Q E H
Sbjct: 1884 FYLDSLEEKRKQQRSERLERIFQLSEAH 1911
Score = 38 (18.4 bits), Expect = 1.6e-237, Sum P(6) = 1.6e-237
Identities = 8/17 (47%), Positives = 12/17 (70%)
Query: 325 LLQKESEIPVEELLARY 341
L ++ E+ VEELL +Y
Sbjct: 436 LAREGGELSVEELLQQY 452
Score = 38 (18.4 bits), Expect = 1.0e-157, Sum P(6) = 1.0e-157
Identities = 7/10 (70%), Positives = 8/10 (80%)
Query: 934 IPAARAPAPV 943
IPA+R P PV
Sbjct: 1069 IPASRPPGPV 1078
Score = 38 (18.4 bits), Expect = 5.8e-153, Sum P(5) = 5.8e-153
Identities = 8/27 (29%), Positives = 18/27 (66%)
Query: 1555 GGKISITAMPVKRVLMIKPEKLKKGNV 1581
G K+++T V+++ + +P L++ NV
Sbjct: 1221 GNKLTLTGAQVRQLAVGQPRPLQR-NV 1246
Score = 37 (18.1 bits), Expect = 1.4e-05, Sum P(4) = 1.4e-05
Identities = 13/52 (25%), Positives = 24/52 (46%)
Query: 1201 EDEADYMALKRAEQEEAVDNQEFTEEAVGRPEDDELVIEDTVRTDEPTDQGG 1252
ED+ ++ A ++EA D E+ + E E ++ V +E +GG
Sbjct: 398 EDDEEFTA----NEDEAEDE----EDTIAAEEQLEGEVDPAVELNELAREGG 441
>RGD|1565642 [details] [associations]
symbol:Srcap "Snf2-related CREBBP activator protein"
species:10116 "Rattus norvegicus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005794 "Golgi apparatus" evidence=ISO]
[GO:0043234 "protein complex" evidence=ISO] InterPro:IPR000330
InterPro:IPR001650 InterPro:IPR017956 Pfam:PF00176 Pfam:PF00271
PROSITE:PS51194 SMART:SM00384 SMART:SM00490 RGD:1565642
GO:GO:0005524 GO:GO:0005634 GO:GO:0005794 GO:GO:0043234
GO:GO:0003677 InterPro:IPR020478 PRINTS:PR00929 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 PROSITE:PS51204 OrthoDB:EOG4B2SWB
IPI:IPI00778475 Ensembl:ENSRNOT00000054997 UCSC:RGD:1565642
ArrayExpress:D3ZWX7 Uniprot:D3ZWX7
Length = 3182
Score = 1318 (469.0 bits), Expect = 6.8e-235, Sum P(5) = 6.8e-235
Identities = 233/327 (71%), Positives = 282/327 (86%)
Query: 432 QPTGITFSTTQVRTKFPFLLKFPLREYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTI 491
QP G T +TTQV+T P LL+ LREYQHIGLDWLVTMYEK+LNGILADEMGLGKTI TI
Sbjct: 605 QPKGYTLATTQVKTPIPLLLRGQLREYQHIGLDWLVTMYEKKLNGILADEMGLGKTIQTI 664
Query: 492 AMLAHLACEKGIWGPHLIVVPTSVMLNWETEFLKWCPAFKILTYFGSAKERKFKRQGWLK 551
++LAHLACEKG WGPHLI+VPTSVMLNWE E +WCP+FKILTY+G+ KERK KRQGW K
Sbjct: 665 SLLAHLACEKGNWGPHLIIVPTSVMLNWEMELKRWCPSFKILTYYGAQKERKLKRQGWTK 724
Query: 552 PNSFHVCITTYRLIIQDSKVFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLT 611
PN+FHVCIT+Y+L++QD + F+RK W+YLILDEA IKN+KSQRWQ+LLNFNS+RR+LLT
Sbjct: 725 PNAFHVCITSYKLVLQDHQAFRRKNWRYLILDEAQNIKNFKSQRWQSLLNFNSQRRLLLT 784
Query: 612 GTPLQNDLMELWSLMHFLMPHIFQSHQEFKDWFCNPISGMVEGQEKVNKEVVDRLHNVLR 671
GTPLQN LMELWSLMHFLMPH+FQSH+EFK+WF NP++GM+EG ++ N+ +V RLH VLR
Sbjct: 785 GTPLQNSLMELWSLMHFLMPHVFQSHREFKEWFSNPLTGMIEGSQEYNEGLVKRLHKVLR 844
Query: 672 PFILRRLKRDVEKQLPMKQEHVIYCRLSKRQRNLYEDFIASSETQATLASANFFGMISVI 731
PF+LRR+K DVEKQ+P K EHVI CRLSKRQR LY+DF+A + T+ TLA+ +F +I+++
Sbjct: 845 PFLLRRVKVDVEKQMPKKYEHVIRCRLSKRQRCLYDDFMAQTTTKETLATGHFMSVINIL 904
Query: 732 MQLRKVCNHPDLFEGRPIVSSFDMSGI 758
MQLRKVCNHP+LF+ RP+ S F GI
Sbjct: 905 MQLRKVCNHPNLFDPRPVTSPFITPGI 931
Score = 805 (288.4 bits), Expect = 6.8e-235, Sum P(5) = 6.8e-235
Identities = 181/427 (42%), Positives = 248/427 (58%)
Query: 874 PVYSTSLRELLTVKHPVCDILQQKTVRRSY----LYSSKLADIVLSPVERFQRMIGLVES 929
PVY T + + T+ PV + ++ S+ Y+ VL P +R ++ ++E
Sbjct: 1903 PVYGTEVLDFCTLPQPVASPIGPRSPGPSHPIFWTYTEAAHQAVLFPQQRLDQLSEIIER 1962
Query: 930 FMFAIPAARAPAPVCW-CSKSGASVFLQPTYKEKCSEVLSPLLFPIRPAIVRRQVYFPDR 988
F+F +P AP P C Q ++E+ + L P P+ + + FPD
Sbjct: 1963 FIFVMPPVEAPPPSLHACHPPPWLAPHQAAFQEQLACELWPRARPLHRIVCNMRTQFPDL 2022
Query: 989 RLIQFDC-GKLQELAILLRKLKSDGHRALIFTQMTKMLDILEEFISLYGYTYMRLDGSTQ 1047
RLIQ+DC GKLQ LA+LLR+LK++GHR LIFTQMT+MLD+LE+F++ +G+ Y+RLDGST+
Sbjct: 2023 RLIQYDCAGKLQTLAVLLRQLKAEGHRVLIFTQMTRMLDVLEQFLTYHGHLYLRLDGSTR 2082
Query: 1048 PEERQTLMQRFNTNPKIFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQDRCHR 1107
E+RQ LM+RFN + +IF FILSTRSGGVG+NL GADTV+FYDSDWNP MD QAQDRCHR
Sbjct: 2083 VEQRQALMERFNADKRIFCFILSTRSGGVGVNLTGADTVVFYDSDWNPTMDAQAQDRCHR 2142
Query: 1108 IGQTREVHIYRLISESTIEENILKKANQKRALDDLVIQSGGYNTEFFKKLDPMELFSGHR 1167
IGQTR+VHIYRLISE T+EENILKKANQKR L D+ I+ G + T +FK+ ELF
Sbjct: 2143 IGQTRDVHIYRLISERTVEENILKKANQKRMLGDMAIEGGNFTTAYFKQQTIRELFDMPL 2202
Query: 1168 TLPMKTMQKEKAINNGNEVSLSNADV-EAALKCVEDEADYMALKRAEQEEAVDNQEFTEE 1226
P + V+ + E AL EDE D A +A+ E+ + EF E
Sbjct: 2203 EEPPGSSVSSVPEEEEETVASKQTHILEQALCRAEDEEDIRAATQAKAEQVAELAEFNEN 2262
Query: 1227 AVGRPEDDELVIEDTVRTDEPTDQGGCMTANNDNGMMLTGNDPKEERALTFA-AKEDDVD 1285
G P + E+ R + A + ++ P E A+ F A ++V
Sbjct: 2263 E-GFPAGEG---EEASRPGPGAEDEEMSRAEQEIAALVEQLTPIERYAMKFLEASLEEVS 2318
Query: 1286 MLADVKQ 1292
++KQ
Sbjct: 2319 R-EELKQ 2324
Score = 168 (64.2 bits), Expect = 6.8e-235, Sum P(5) = 6.8e-235
Identities = 41/123 (33%), Positives = 70/123 (56%)
Query: 22 VAVNISKDVKKFWMKIEKLVLYKHQMEVDVRKKKALDKQLEFLLGQTERYSSMLAENL-- 79
+A ++KDV++FW +EK+V +K Q ++ ++KKALD L+F++GQTE+YS +L+++L
Sbjct: 194 IASTMAKDVRQFWSNVEKVVQFKQQSRLEEKRKKALDLHLDFIVGQTEKYSDLLSQSLNQ 253
Query: 80 -VDSHK----P-VQQSPMREQPGIQYKEADENGAEEPGVQSKEADEDDAEQHSGFEPQLD 133
+ S K P + S P D+ A + Q +E +E+D E+ E Q +
Sbjct: 254 PLASSKAGSSPCLGSSSAASSPPPPVSRLDDE-AIDGDFQPQEEEEEDDEETIEVEEQQE 312
Query: 134 AAD 136
D
Sbjct: 313 GND 315
Score = 67 (28.6 bits), Expect = 5.3e-223, Sum P(5) = 5.3e-223
Identities = 21/69 (30%), Positives = 27/69 (39%)
Query: 270 SGASTQKQALYDFSDEQEDGDFVVATGXXXXXXXXXXXXXXXXXXDSNNYIDEIALLQKE 329
S AS+ + DE DGDF D+ EI LL+ E
Sbjct: 270 SAASSPPPPVSRLDDEAIDGDFQPQEEEEEDDEETIEVEEQQEGNDAETQRREIELLRHE 329
Query: 330 SEIPVEELL 338
E+P+EELL
Sbjct: 330 GELPLEELL 338
Score = 65 (27.9 bits), Expect = 6.8e-235, Sum P(5) = 6.8e-235
Identities = 15/52 (28%), Positives = 31/52 (59%)
Query: 1302 EAISSFENQLRPIDRYAIRFLEL-WDPIIDKTAVESEVKFEEREWELDRIEK 1352
+ I++ QL PI+RYA++FLE + + + ++E + E +LD+ ++
Sbjct: 2290 QEIAALVEQLTPIERYAMKFLEASLEEVSREELKQAEEQVEAARKDLDQAKE 2341
Score = 49 (22.3 bits), Expect = 6.8e-235, Sum P(5) = 6.8e-235
Identities = 26/116 (22%), Positives = 47/116 (40%)
Query: 180 DIPLQELLKRYAVDKVGRESSAEMG--EDEAEPTVVEEGHVQGNGNDLLAGSKLDTSG-- 235
++ ++ELL++YA S+ G EDE E D+ ++ D+S
Sbjct: 442 ELSMEELLQQYAGAYAYDASAPGSGNSEDEEEVEANSSDCELEETRDVEEAAQEDSSSQS 501
Query: 236 -SLVRRCDEINGGLSISENHLLDIETSQVRDTSKKSGASTQKQALYDFSDEQEDGD 290
S ++ SE + S+ ++ + A +Q QA + DE +D D
Sbjct: 502 DSAEEHSEDEED--EHSEEEMSGSSQSEESESDESEDAQSQSQADEEQEDEGDDDD 555
Score = 48 (22.0 bits), Expect = 2.3e-154, Sum P(6) = 2.3e-154
Identities = 23/84 (27%), Positives = 39/84 (46%)
Query: 1803 RELVDSTISFPPRVNLSVYGSDLETSVNKSTRENHHLKDSQV-AENR--FRDAARACIED 1859
REL D + PP ++S + E +V ++++ H L+ + AE+ R A +A E
Sbjct: 2195 RELFDMPLEEPPGSSVSSVPEEEEETV--ASKQTHILEQALCRAEDEEDIRAATQAKAEQ 2252
Query: 1860 SLGWA----SSAFPANDAKLRSVP 1879
A + FPA + + S P
Sbjct: 2253 VAELAEFNENEGFPAGEGEEASRP 2276
Score = 47 (21.6 bits), Expect = 1.1e-234, Sum P(5) = 1.1e-234
Identities = 9/20 (45%), Positives = 15/20 (75%)
Query: 322 EIALLQKESEIPVEELLARY 341
E++ L +E E+ +EELL +Y
Sbjct: 433 ELSELAREGELSMEELLQQY 452
Score = 45 (20.9 bits), Expect = 1.9e-219, Sum P(4) = 1.9e-219
Identities = 15/42 (35%), Positives = 21/42 (50%)
Query: 101 EADENGAEEPG--VQSKEADEDDAE----QHSGFEPQLDAAD 136
E DE+ EE QS+E++ D++E Q E Q D D
Sbjct: 511 EEDEHSEEEMSGSSQSEESESDESEDAQSQSQADEEQEDEGD 552
Score = 42 (19.8 bits), Expect = 0.00049, Sum P(3) = 0.00049
Identities = 29/144 (20%), Positives = 51/144 (35%)
Query: 1771 ANSRQQDDKVSNFDRRE--DGPVIEQLDLTLEFQRELVDSTISFPPR-VNLSVYGSDLET 1827
AN + +D+ E +G V ++L+ E RE S + Y +
Sbjct: 406 ANEDEAEDEEDTIAAEEQLEGEVDHAMELS-ELAREGELSMEELLQQYAGAYAYDASAPG 464
Query: 1828 SVNKSTRENHHLKDSQVAENRFRDAARACIEDSLGWASSAFPANDAKLRSVPKSQSLGKH 1887
S N E S RD A EDS + SA ++ + + + G
Sbjct: 465 SGNSEDEEEVEANSSDCELEETRDVEEAAQEDSSSQSDSAEEHSEDEEDEHSEEEMSGSS 524
Query: 1888 KLSLSDSVKCPKSKLRKTSMEHSE 1911
+ S+S + ++ + + E E
Sbjct: 525 QSEESESDESEDAQSQSQADEEQE 548
Score = 41 (19.5 bits), Expect = 5.0e-219, Sum P(4) = 5.0e-219
Identities = 10/54 (18%), Positives = 24/54 (44%)
Query: 76 AENLVDSHKPVQQSPMREQPGIQYKEADENGAEEPGVQSKEADEDDAEQHSGFE 129
+E+ D H + S + + E+++ ++ + +E + DD + G E
Sbjct: 508 SEDEEDEHSEEEMSGSSQSEESESDESEDAQSQSQADEEQEDEGDDDDDDFGVE 561
Score = 40 (19.1 bits), Expect = 6.3e-219, Sum P(4) = 6.3e-219
Identities = 9/27 (33%), Positives = 13/27 (48%)
Query: 101 EADEN-GAEEPGVQSKEADEDDAEQHS 126
E +E EE + + D AE+HS
Sbjct: 482 ELEETRDVEEAAQEDSSSQSDSAEEHS 508
Score = 40 (19.1 bits), Expect = 3.9e-156, Sum P(6) = 3.9e-156
Identities = 10/28 (35%), Positives = 11/28 (39%)
Query: 1088 FYDSDWNPAMDQQAQDRCHRIGQTREVH 1115
FY QQ +R RI Q E H
Sbjct: 1871 FYLDSLEEKRKQQRSERLERIFQLSEAH 1898
Score = 40 (19.1 bits), Expect = 1.8e-155, Sum P(7) = 1.8e-155
Identities = 11/39 (28%), Positives = 20/39 (51%)
Query: 1158 DPMELFSGHRTLPMKTMQKEKAINNGNEVS-LSNADVEA 1195
+P++L HR L T + + ++N + L A+V A
Sbjct: 2624 EPLQLLETHRNLE-DTREVQTPVSNSEKPQELVRAEVTA 2661
Score = 40 (19.1 bits), Expect = 0.00082, Sum P(5) = 0.00082
Identities = 16/58 (27%), Positives = 29/58 (50%)
Query: 1446 KAVKEEPSVEPMSIDDDFYDEDATFSDA-MSPPSTSQKKR----KKAELALYDDEERE 1498
+A +E+ S + S ++ DE+ S+ MS S S++ + A+ DEE+E
Sbjct: 491 EAAQEDSSSQSDSAEEHSEDEEDEHSEEEMSGSSQSEESESDESEDAQSQSQADEEQE 548
Score = 38 (18.4 bits), Expect = 4.7e-232, Sum P(5) = 4.7e-232
Identities = 9/20 (45%), Positives = 13/20 (65%)
Query: 1270 KEERALTFAAKEDDVDMLAD 1289
K E ++ A +DD+D LAD
Sbjct: 3033 KSEGSMVMAVIQDDLD-LAD 3051
Score = 38 (18.4 bits), Expect = 3.8e-154, Sum P(6) = 3.8e-154
Identities = 8/27 (29%), Positives = 18/27 (66%)
Query: 1555 GGKISITAMPVKRVLMIKPEKLKKGNV 1581
G K+++T V+++ + +P L++ NV
Sbjct: 1223 GNKLTLTGAQVRQLAVGQPRPLQR-NV 1248
Score = 37 (18.1 bits), Expect = 5.3e-223, Sum P(5) = 5.3e-223
Identities = 11/41 (26%), Positives = 18/41 (43%)
Query: 179 TDIPLQELLKRYAVDKVGR-----ESSAEMGEDEAEPTVVE 214
T +PL+ +A D + R +S AE+ E +E
Sbjct: 67 TTVPLEGFSLSHAADPINRGPKWEKSHAEIAEQAKHEAEIE 107
Score = 37 (18.1 bits), Expect = 3.9e-156, Sum P(6) = 3.9e-156
Identities = 6/10 (60%), Positives = 8/10 (80%)
Query: 934 IPAARAPAPV 943
+PA+R P PV
Sbjct: 1071 VPASRPPGPV 1080
Score = 37 (18.1 bits), Expect = 7.4e-86, Sum P(4) = 7.4e-86
Identities = 7/14 (50%), Positives = 8/14 (57%)
Query: 729 SVIMQLRKVCNHPD 742
S + Q K C HPD
Sbjct: 385 SSVTQCNKQCWHPD 398
>FB|FBgn0020306 [details] [associations]
symbol:dom "domino" species:7227 "Drosophila melanogaster"
[GO:0004386 "helicase activity" evidence=IEA;NAS] [GO:0008283 "cell
proliferation" evidence=NAS] [GO:0016458 "gene silencing"
evidence=IGI] [GO:0008094 "DNA-dependent ATPase activity"
evidence=ISS] [GO:0002165 "instar larval or pupal development"
evidence=IMP] [GO:0006325 "chromatin organization" evidence=IMP]
[GO:0048477 "oogenesis" evidence=IMP] [GO:0005634 "nucleus"
evidence=IC;IDA] [GO:0035207 "negative regulation of hemocyte
proliferation" evidence=TAS] [GO:0030097 "hemopoiesis"
evidence=TAS] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA] [GO:0000381 "regulation of alternative
mRNA splicing, via spliceosome" evidence=IMP] [GO:0000123 "histone
acetyltransferase complex" evidence=IPI] [GO:0045747 "positive
regulation of Notch signaling pathway" evidence=IGI] [GO:0035222
"wing disc pattern formation" evidence=IGI] [GO:0010629 "negative
regulation of gene expression" evidence=IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0070983 "dendrite guidance"
evidence=IMP] [GO:0022008 "neurogenesis" evidence=IMP] [GO:2000637
"positive regulation of gene silencing by miRNA" evidence=IMP]
InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 EMBL:AE013599 GO:GO:0005524
GO:GO:0006355 GO:GO:0003677 GO:GO:0035222 GO:GO:0048477
GO:GO:0016573 GO:GO:0045747 GO:GO:0006351 GO:GO:0007049
GO:GO:0035267 GO:GO:0004386 GO:GO:0030097 GO:GO:0043486
GO:GO:2000637 HSSP:Q97XQ5 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0016458 InterPro:IPR017877
PROSITE:PS50090 GO:GO:0070983 InterPro:IPR013999 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 SMART:SM00573 PROSITE:PS51204
GO:GO:0008094 GO:GO:0000381 EMBL:AF076776 EMBL:AF254373
EMBL:AY058653 RefSeq:NP_524833.2 RefSeq:NP_788424.1 UniGene:Dm.7802
ProteinModelPortal:Q9NDJ2 SMR:Q9NDJ2 IntAct:Q9NDJ2 STRING:Q9NDJ2
PaxDb:Q9NDJ2 EnsemblMetazoa:FBtr0071603 GeneID:45655
KEGG:dme:Dmel_CG9696 UCSC:CG9696-RA CTD:45655 FlyBase:FBgn0020306
GeneTree:ENSGT00530000063427 InParanoid:Q9NDJ2 KO:K11320
OMA:TENDASA OrthoDB:EOG4C5B08 PhylomeDB:Q9NDJ2 GenomeRNAi:45655
NextBio:838265 Bgee:Q9NDJ2 GO:GO:0002165 GO:GO:0035207
Uniprot:Q9NDJ2
Length = 3198
Score = 1340 (476.8 bits), Expect = 1.9e-225, Sum P(5) = 1.9e-225
Identities = 270/564 (47%), Positives = 350/564 (62%)
Query: 284 DEQEDGDFVVATGXXXXXXXXXXXXXXXXXXDSNNYIDEIALLQKESEIPVEELLARYRK 343
D+ +D +F D IDE L+ ++++ VE+LLA+Y+
Sbjct: 731 DDSDDSEFEAKEASDDDENTISKQEEAEQEIDHKKEIDE---LEADNDLSVEQLLAKYKS 787
Query: 344 DM----KINKIX------XXXXXXXXXXXXXXXXXPAHEDGE----LKLENDFMDGNV-D 388
+ K K+ A ED E +K + D + + +
Sbjct: 788 EQPPSPKRRKLAPRDPELDSDDDSTAVDSTEESEDAATEDEEDLSTVKTDTDMEEQDEQE 847
Query: 389 PGASQLVMLPLTXXXXXXXXXXXXXXXXXXNRIXXXXXXXXXXQPTGITFSTTQVRTKFP 448
G L+ + + QP G T S+T V T P
Sbjct: 848 DGLKSLMADADATSGAAGSGSTAGASGNKDDMLNDAAALAESLQPKGNTLSSTNVVTPVP 907
Query: 449 FLLKFPLREYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTIAMLAHLACEKGIWGPHL 508
FLLK LREYQHIGLDWLVTM E++LNGILADEMGLGKTI TIA+LAHLAC KG WGPHL
Sbjct: 908 FLLKHSLREYQHIGLDWLVTMNERKLNGILADEMGLGKTIQTIALLAHLACAKGNWGPHL 967
Query: 509 IVVPTSVMLNWETEFLKWCPAFKILTYFGSAKERKFKRQGWLKPNSFHVCITTYRLIIQD 568
IVVP+SVMLNWE EF KWCP FKILTY+GS KERK KR GW KPN+FHVCIT+Y+L++QD
Sbjct: 968 IVVPSSVMLNWEMEFKKWCPGFKILTYYGSQKERKLKRVGWTKPNAFHVCITSYKLVVQD 1027
Query: 569 SKVFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPLQNDLMELWSLMHF 628
+ F+RKKWKYLILDEA IKN+KSQRWQ LLNF+++RR+LLTGTPLQNDLMELWSLMHF
Sbjct: 1028 QQSFRRKKWKYLILDEAQNIKNFKSQRWQLLLNFSTERRLLLTGTPLQNDLMELWSLMHF 1087
Query: 629 LMPHIFQSHQEFKDWFCNPISGMVEGQEKVNKEVVDRLHNVLRPFILRRLKRDVEKQLPM 688
LMP++F SH+EFK+WF NP++GM+EG + N+ ++ RLH V+RPF+LRRLK++VEKQ+P
Sbjct: 1088 LMPYVFSSHREFKEWFSNPMTGMIEGNMEYNETLITRLHKVIRPFLLRRLKKEVEKQMPK 1147
Query: 689 KQEHVIYCRLSKRQRNLYEDFIASSETQATLASANFFGMISVIMQLRKVCNHPDLFEGRP 748
K EHVI CRLS RQR LYEDF++ ++T+ TL + N +I+V+MQLRKVCNHP++FE RP
Sbjct: 1148 KYEHVITCRLSNRQRYLYEDFMSRAKTRETLQTGNLLSVINVLMQLRKVCNHPNMFEARP 1207
Query: 749 IVSSFDMSGIDXXXXXXXXXXXXXXXXXTADLKGLGLLFTNLDFSMNSWESDELNAIATP 808
+S F M GI +L+ L LL +L+ +M ++ S + +A P
Sbjct: 1208 TISPFQMDGITFHTPRLVCDIMEYDPFTQINLETLNLLLLHLEQTMTAYVSHKSRLLAPP 1267
Query: 809 ASLIKERADLNNLEEVGPFCTHRK 832
LI+ D++ P C + K
Sbjct: 1268 RKLIE---DIDTAPLPAPRCPNGK 1288
Score = 719 (258.2 bits), Expect = 1.9e-225, Sum P(5) = 1.9e-225
Identities = 162/333 (48%), Positives = 206/333 (61%)
Query: 918 ERFQRMIGLVESFMFAIPAARAPAPVCWCSKSGASVFLQPTYKEKC-SEVLSPLLFPIRP 976
ER + + +F+ +P+ AP + ++ + E + L P L + P
Sbjct: 1579 ERCADLKPVFANFVIYVPSVCAPRIRRYVQNLSSTHWQHEQRIENIVDQALRPKLALLHP 1638
Query: 977 AIVRRQVYFPDRRLIQFDCGKLQELAILLRKLKSDGHRALIFTQMTKMLDILEEFISLYG 1036
I FPD RLIQ+DCGKLQ + LLR+LK +GHR LIFTQMTKMLD+LE F++ +G
Sbjct: 1639 IISEMTTKFPDPRLIQYDCGKLQTMDRLLRQLKVNGHRVLIFTQMTKMLDVLEAFLNYHG 1698
Query: 1037 YTYMRLDGSTQPEERQTLMQRFNTNPKIFLFILSTRSGGVGINLVGADTVIFYDSDWNPA 1096
+ Y+RLDGST+ E+RQ LM+RFN + +IF FILSTRSGGVGINL GADTVIFYDSDWNP
Sbjct: 1699 HIYLRLDGSTRVEQRQILMERFNGDKRIFCFILSTRSGGVGINLTGADTVIFYDSDWNPT 1758
Query: 1097 MDQQAQDRCHRIGQTREVHIYRLISESTIEENILKKANQKRALDDLVIQSGGYNTEFFKK 1156
MD QAQDRCHRIGQTR+VHIYRL+SE TIE NILKKANQKR L D+ I+ G + T +FK
Sbjct: 1759 MDAQAQDRCHRIGQTRDVHIYRLVSERTIEVNILKKANQKRMLSDMAIEGGNFTTTYFKS 1818
Query: 1157 LDPMELFSGHRTLPMKTMQKEKAINNGNEVSLSN-ADV---------------EAALKCV 1200
+LF+ ++ ++ Q EK+ N V+ + +D E AL
Sbjct: 1819 STIKDLFTMEQSEQDESSQ-EKSENKDRIVATTTLSDTPSTVVETEKQSLRAFEHALAAA 1877
Query: 1201 EDEADYMALKRAEQEEAVDNQEFTEEAVGRPED 1233
EDE D A K A+ E A D EF E ED
Sbjct: 1878 EDEQDVQATKTAKAEVAADLAEFDENIPIATED 1910
Score = 173 (66.0 bits), Expect = 1.9e-225, Sum P(5) = 1.9e-225
Identities = 43/118 (36%), Positives = 68/118 (57%)
Query: 22 VAVNISKDVKKFWMKIEKLVLYKHQMEVDVRKKKALDKQLEFLLGQTERYSSMLAENLVD 81
VA I+++VK FW +EKLV YKHQ +++ ++K+ALD+ L F++ QTE++S L E +
Sbjct: 577 VASFIAREVKSFWSNVEKLVEYKHQTKIEEKRKQALDQHLSFIVDQTEKFSQQLVEGM-- 634
Query: 82 SHKPVQQSPMREQPGIQY--KEADENGAEEPGVQSKEADEDDAEQHSGFEPQLDAADI 137
+K V +P + +E+D++ E G EDD E + E DAAD+
Sbjct: 635 -NKSVADTPSLNSSRLTSPKRESDDDFRPESG------SEDDEETIAKAEE--DAADV 683
Score = 89 (36.4 bits), Expect = 3.0e-159, Sum P(5) = 3.0e-159
Identities = 35/157 (22%), Positives = 68/157 (43%)
Query: 1205 DYMALKRAEQEEAVDNQEFTEE---AVGRPEDDELVIEDTVRTDEPTDQGGCMTANNDNG 1261
D ++++EQ+E+ + ++ A D + +T + + A ++
Sbjct: 1823 DLFTMEQSEQDESSQEKSENKDRIVATTTLSDTPSTVVETEKQSLRAFEHALAAAEDEQD 1882
Query: 1262 MMLTGNDPKEERALTFAAKEDDVDMLA-DVKQMXXXXXXXGEAISSFEN---QLRPIDRY 1317
+ T K E A A ++++ + D +A +N QL PI+RY
Sbjct: 1883 VQAT-KTAKAEVAADLAEFDENIPIATEDPNAEGGPQVELSKADLEMQNLVKQLSPIERY 1941
Query: 1318 AIRFLE----LWDPIIDKTAVESEVKFEEREWELDRI 1350
A+RF+E W A E+E++ ++REWE +R+
Sbjct: 1942 AMRFVEETGAAWTAE-QLRAAEAELEAQKREWEANRL 1977
Score = 55 (24.4 bits), Expect = 2.1e-05, Sum P(4) = 2.1e-05
Identities = 26/105 (24%), Positives = 41/105 (39%)
Query: 1213 EQEEAVDNQEFTEEAVGRPEDDELVIE---DTVRTDEPTDQGGCMTANNDNGMMLTGNDP 1269
+ AVD+ E +E+A E+D ++ D DE D + A+ D G+
Sbjct: 809 DDSTAVDSTEESEDAATEDEEDLSTVKTDTDMEEQDEQEDGLKSLMADADATSGAAGSGS 868
Query: 1270 KEERALTFAAKEDDVDMLADVKQMXXXXXXXGEAISSFENQLRPI 1314
T A + DML D + G +SS N + P+
Sbjct: 869 ------TAGASGNKDDMLNDAAALAESLQPKGNTLSS-TNVVTPV 906
Score = 46 (21.3 bits), Expect = 1.6e-08, Sum P(5) = 1.6e-08
Identities = 21/103 (20%), Positives = 44/103 (42%)
Query: 1122 ESTI--EENILKKANQKRALDDLVIQSGGYNTEFFKKLDPMELFSGHRTLPMKTMQKEKA 1179
E+TI +E ++ + K+ +D+L + + K + S R K ++
Sbjct: 748 ENTISKQEEAEQEIDHKKEIDELEADNDLSVEQLLAKYKSEQPPSPKRR---KLAPRDPE 804
Query: 1180 INNGNEVSLSNADVEAALKCVEDEADYMALKRAEQEEAVDNQE 1222
+++ ++ + ++ E+ EDE D +K E D QE
Sbjct: 805 LDSDDDSTAVDSTEESEDAATEDEEDLSTVKTDTDMEEQDEQE 847
Score = 43 (20.2 bits), Expect = 1.9e-225, Sum P(5) = 1.9e-225
Identities = 12/32 (37%), Positives = 17/32 (53%)
Query: 1610 PNWSLVSDILYGMTASGYYRG----RYRHPVH 1637
PNW LVS+++ S YR R+R+ H
Sbjct: 2175 PNWDLVSEMVN--FCSKTYRSARQCRWRYETH 2204
Score = 42 (19.8 bits), Expect = 1.5e-211, Sum P(5) = 1.5e-211
Identities = 8/31 (25%), Positives = 17/31 (54%)
Query: 91 MREQPGIQYKEADENGAEEPGVQSKEADEDD 121
M+E+ K + +++ ++KEA +DD
Sbjct: 717 MKEEQSSAIKTETPDDSDDSEFEAKEASDDD 747
Score = 40 (19.1 bits), Expect = 1.9e-225, Sum P(5) = 1.9e-225
Identities = 8/24 (33%), Positives = 15/24 (62%)
Query: 315 DSNNYIDEIALLQKESEIPVEELL 338
D+ + +E+ L KESE+ ++ L
Sbjct: 679 DAADVKEEVTALAKESEMDFDDFL 702
Score = 40 (19.1 bits), Expect = 4.9e-75, Sum P(4) = 4.9e-75
Identities = 10/28 (35%), Positives = 17/28 (60%)
Query: 635 QSHQEFKDWFCNPIS-GMVEGQEKVNKE 661
+S +F D F N + G +E ++K+ KE
Sbjct: 693 ESEMDFDD-FLNDLPPGYLENRDKLMKE 719
Score = 39 (18.8 bits), Expect = 1.5e-211, Sum P(5) = 1.5e-211
Identities = 8/30 (26%), Positives = 18/30 (60%)
Query: 48 EVDVRKKKALDKQLEFLLGQTERYSSMLAE 77
+++ KK+ L ++L+ L ER+ ++E
Sbjct: 182 DLNALKKRILQQKLQILRNLKERHLENVSE 211
Score = 39 (18.8 bits), Expect = 5.3e-154, Sum P(5) = 5.3e-154
Identities = 7/32 (21%), Positives = 15/32 (46%)
Query: 790 LDFSMNSWESDELNAIATPASLIKERADLNNL 821
L+ WE++ L A+ L+K+ + +
Sbjct: 1965 LEAQKREWEANRLAAMHKEEELLKQETEAEEM 1996
Score = 38 (18.4 bits), Expect = 3.0e-211, Sum P(5) = 3.0e-211
Identities = 15/60 (25%), Positives = 23/60 (38%)
Query: 72 SSMLAENLVDSHKPVQQSPMREQPGIQYKEADENGAEEPGVQSKEADEDDAEQHSGFEPQ 131
SS + L + PV SP+ +Q Q + A+ A S + + S PQ
Sbjct: 74 SSKQQKQLASAQLPVPLSPLPQQ---QQQTAEATAAAAAPAHSNVSVSSSTIEASVLPPQ 130
Score = 38 (18.4 bits), Expect = 6.8e-152, Sum P(4) = 6.8e-152
Identities = 9/45 (20%), Positives = 18/45 (40%)
Query: 1820 VYGSDLETSVNKSTRENHHLKDSQVAENRFRDAARACIEDSLGWA 1864
+YG D ++ + + LK S + + A + GW+
Sbjct: 1526 IYGEDCREAIQRCMQATRSLKRSTWQTRGYANCCTAMAHRN-GWS 1569
Score = 38 (18.4 bits), Expect = 0.00087, Sum P(4) = 0.00087
Identities = 7/25 (28%), Positives = 13/25 (52%)
Query: 1443 SESKAVKEEPSVEPMSIDDDFYDED 1467
SE A ++E + + D D ++D
Sbjct: 820 SEDAATEDEEDLSTVKTDTDMEEQD 844
Score = 37 (18.1 bits), Expect = 8.6e-154, Sum P(5) = 8.6e-154
Identities = 11/37 (29%), Positives = 15/37 (40%)
Query: 800 DELNAIATPASLIKERADLNNLEEVGPFCTHRKRLNG 836
DE + AT + + ADL +E P T G
Sbjct: 1879 DEQDVQATKTAKAEVAADLAEFDENIPIATEDPNAEG 1915
Score = 37 (18.1 bits), Expect = 3.5e-62, Sum P(3) = 3.5e-62
Identities = 19/94 (20%), Positives = 39/94 (41%)
Query: 35 MKIEKLVL-YKHQMEVDVRKKKALDKQLEFLLGQTERYSSMLAENLVDSHKPVQQSPMRE 93
+ +E+L+ YK + +++K + E L + + E D+ ++
Sbjct: 776 LSVEQLLAKYKSEQPPSPKRRKLAPRDPE-LDSDDDSTAVDSTEESEDAATEDEEDLSTV 834
Query: 94 QPGIQYKEADENGAEEPGVQSKEADEDDAEQHSG 127
+ +E DE +E G++S AD D +G
Sbjct: 835 KTDTDMEEQDE---QEDGLKSLMADADATSGAAG 865
Score = 37 (18.1 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 12/33 (36%), Positives = 15/33 (45%)
Query: 246 GGLSISENHLLDIETSQVRDTSKKSGASTQKQA 278
GG I +++ TSQ S G ST QA
Sbjct: 2721 GGTIIQASNMATHVTSQKVAVSGMPGTSTTVQA 2753
>ASPGD|ASPL0000041040 [details] [associations]
symbol:AN9077 species:162425 "Emericella nidulans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0006338 "chromatin remodeling" evidence=IEA] [GO:0000812 "Swr1
complex" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR002464 Pfam:PF00176 Pfam:PF00271 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0006355 GO:GO:0003677 EMBL:BN001306 GO:GO:0006351
GO:GO:0016568 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529
PROSITE:PS51204 GO:GO:0008026 EMBL:AACD01000169 KO:K11681
RefSeq:XP_682346.1 STRING:Q5ARK3 GeneID:2868023 KEGG:ani:AN9077.2
HOGENOM:HOG000186095 OMA:YGNQEER OrthoDB:EOG49S9FK Uniprot:Q5ARK3
Length = 1698
Score = 1809 (641.9 bits), Expect = 2.1e-198, Sum P(4) = 2.1e-198
Identities = 389/804 (48%), Positives = 513/804 (63%)
Query: 443 VRTKFPFLLKFPLREYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTIAMLAHLACEKG 502
++T P LL+ LREYQH GLDWL +Y +NGILADEMGLGKTI TIA+LAHLA E G
Sbjct: 813 LKTPIPHLLRGTLREYQHFGLDWLAGLYSNHINGILADEMGLGKTIQTIALLAHLAVEHG 872
Query: 503 IWGPHLIVVPTSVMLNWETEFLKWCPAFKILTYFGSAKERKFKRQGWLKPNSFHVCITTY 562
+WGPHL+VVPTSV+LNWE EF KWCP FKI+TY+G+ +ER+ KR+GW+ NS++V IT+Y
Sbjct: 873 VWGPHLVVVPTSVILNWEMEFKKWCPGFKIMTYYGNQEERRQKRRGWMDDNSWNVLITSY 932
Query: 563 RLIIQDSKVFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPLQNDLMEL 622
+L++QD +V KR+ W Y+ILDEAH IKN++SQRWQ LL F ++ R+LLTGTPLQN+L EL
Sbjct: 933 QLVLQDQQVLKRRSWHYMILDEAHNIKNFRSQRWQALLTFRTRARLLLTGTPLQNNLTEL 992
Query: 623 WSLMHFLMP--------HIFQSHQEFKDWFCNPISGMVE-GQEKVN---KEVVDRLHNVL 670
WSL+ FLMP F + F +WF P+ ++E G+E ++ K+VV +LH VL
Sbjct: 993 WSLLFFLMPTDGDEAGIEGFADLRNFSEWFRRPVEQILEHGRETMDDEAKQVVTKLHTVL 1052
Query: 671 RPFILRRLKRDVEKQLPMKQEHVIYCRLSKRQRNLYEDFIASSETQATLASANFFGMISV 730
RP+ILRRLK DVEKQ+P K EHV+YCRLSKRQR LY+ F++ ++T+ TLAS N+ +I+
Sbjct: 1053 RPYILRRLKADVEKQMPGKYEHVVYCRLSKRQRYLYDGFMSRAQTKETLASGNYLSIINC 1112
Query: 731 IMQLRKVCNHPDLFEGRPIVSSFDMSGIDXXXXXXXXXXXXXXXXXTADLKGLGLLFTNL 790
+MQLRKVCNHPDLFE RPI +SF M L+ L L F NL
Sbjct: 1113 LMQLRKVCNHPDLFETRPISTSFAMPRSVATEFETSEALVRRRLLYQHPLEKLDLDFLNL 1172
Query: 791 DFSMNSWESDELNAIATPASLIKERADLNNLEEVGPFCTH-RKRLNGTSIFXXXXXXXXX 849
+ D +A ++ I A N L E T+ + NG+++
Sbjct: 1173 ---VPISREDISRRLADDSARIMAYAPFNTLRERQYHRTNWEMKFNGSTVQSTLEALEND 1229
Query: 850 XXXXXXQDRASSVAWWNSLRCQKKPVYSTSLRELLTVKHPVCDILQQKTVRRSYL----- 904
+ S+ ++ S R ++PVY +SL E LT +RSY
Sbjct: 1230 CRKRRMAELERSL-YFESKRHGRRPVYGSSLIEFLTADSKQRPTAHGPLRKRSYADWLSS 1288
Query: 905 YSSKLADIVLSPVERFQRMIGLVESFMFAIPAARAPAPVCWCSKSGASVFLQPTYKEKCS 964
SS LA +++S ER Q M G ++ F PAA A A V + + S T KE+
Sbjct: 1289 QSSVLASMMMSLEERSQAMDGYIQRFACVTPAAVA-AGVTEAALTPIST-RHLTNKERF- 1345
Query: 965 EVLSPLLFPIRPAIVRRQVYFPDRRLIQFDCGKLQELAILLRKLKSDGHRALIFTQMTKM 1024
P P A +R + FPD+RL+Q+DCGKLQ L LLR LK+ GHRALIFTQMTKM
Sbjct: 1346 ----PPHDPFHEAQMRLSIAFPDKRLLQYDCGKLQRLDKLLRDLKAGGHRALIFTQMTKM 1401
Query: 1025 LDILEEFISLYGYTYMRLDGSTQPEERQTLMQRFNTNPKIFLFILSTRSGGVGINLVGAD 1084
LD+LE+F++++G+ Y+RLDG+T+ E+RQ L RFN + +I FILS+RSGG+GINL GAD
Sbjct: 1402 LDVLEQFLNIHGHRYLRLDGTTKVEQRQILTDRFNNDNRILAFILSSRSGGLGINLTGAD 1461
Query: 1085 TVIFYDSDWNPAMDQQAQDRCHRIGQTREVHIYRLISESTIEENILKKANQKRALDDLVI 1144
TVIFYD DWNPAMD+Q QDRCHRIGQTR+VHIYR +SE TIE NIL+KANQKR LDD+VI
Sbjct: 1462 TVIFYDLDWNPAMDKQCQDRCHRIGQTRDVHIYRFVSEYTIESNILRKANQKRMLDDVVI 1521
Query: 1145 QSGGYNTEFFKKLDPMELFSGHRTLPMKTMQKEKAINNGNEVSLSNADVEAALKCVEDEA 1204
Q G + T++F KLD ++ L + + N V+ ++ E A ED+
Sbjct: 1522 QEGEFTTDYFTKLDVRDMIGNDEALKDEASAAMDRVLE-NRVTNTSRVFEQA----EDKE 1576
Query: 1205 DYMALKRAEQE-EAVDNQEFTEEA 1227
D A K A++E E D+ +F + A
Sbjct: 1577 DIDAAKNAQKELEHADDGDFDDRA 1600
Score = 63 (27.2 bits), Expect = 2.1e-198, Sum P(4) = 2.1e-198
Identities = 24/108 (22%), Positives = 50/108 (46%)
Query: 26 ISKDVKKFW----MKIEKLVLYKHQMEVDVRKKKALDKQLE--FLLGQTERYSSMLAENL 79
++KD+KK + +I+++ L + + E + ++ALD+ ++ +L + R +L E
Sbjct: 403 LAKDLKKMFELARAEIDRVRLARWEEEQKAKDQRALDRAIKQSTMLFEKRRLE-ILGETG 461
Query: 80 VDSHKPVQQSPMREQPGIQYKEADENGAEEPGVQSKEADEDDAEQHSG 127
D+ + E + DE G +++E D DD + G
Sbjct: 462 SDAPETTTDDEEVETDNGSEND-DEEGESNMSTETEEEDGDDRDDDVG 508
Score = 58 (25.5 bits), Expect = 2.1e-198, Sum P(4) = 2.1e-198
Identities = 23/96 (23%), Positives = 41/96 (42%)
Query: 198 ESSAEMGEDEAEPTVVEEGHVQGNGNDLLAGSKLDTSGSLVRRCDEINGGLS--ISENHL 255
+SS ++ DE +P ++++ + +D + S D G D+ +GG +
Sbjct: 564 DSSGQVELDEVDPVLIDDSDESTDMDDDMGDS--DDDGYSEAESDDEDGGEPGLLGFFSA 621
Query: 256 LDIETSQVRDTSKKSGASTQKQALYDFSDEQEDGDF 291
D+ S + T+ G + Q A D D ED F
Sbjct: 622 KDLSLSNLHQTNSGEGDTHQTGA--D-GDRNEDSSF 654
Score = 42 (19.8 bits), Expect = 2.1e-198, Sum P(4) = 2.1e-198
Identities = 30/154 (19%), Positives = 59/154 (38%)
Query: 1198 KCVEDEADYMALKRAEQEEAVDNQEFTEEAVGRPEDDELVIEDTVRTDEPTDQGGCMTAN 1257
+ ++DEA A+ R + + E+A + + D ++ + E D G
Sbjct: 1544 EALKDEAS-AAMDRVLENRVTNTSRVFEQAEDKEDID--AAKNAQKELEHADDGDFDDRA 1600
Query: 1258 NDNGMMLTGNDPKEERALTFAAKEDDVDMLADVKQ-MXXXXXXXGEAISSFENQLRPIDR 1316
N N +T A + + + +Q + E + + + ID
Sbjct: 1601 NANASGVTAASASASGAGQ-TPTQAGTPLPDEAQQSLNANNAEVAEDTADSDPSVGHIDD 1659
Query: 1317 YAIRFLELW----DPII---DKTAVESEVKFEER 1343
Y +RF+E W +P++ DK+ +S+ E R
Sbjct: 1660 YLLRFME-WNMKDEPLVLPVDKSMKKSKKGKEHR 1692
Score = 37 (18.1 bits), Expect = 7.0e-198, Sum P(4) = 7.0e-198
Identities = 12/43 (27%), Positives = 19/43 (44%)
Query: 1651 LSVPDNSINEKTSNVGSGKALLKVTEDNVRTLLNVAAEQEDNE 1693
L V D N++ + A+ +V E+ V V + ED E
Sbjct: 1534 LDVRDMIGNDEALKDEASAAMDRVLENRVTNTSRVFEQAEDKE 1576
>WB|WBGene00007027 [details] [associations]
symbol:ssl-1 species:6239 "Caenorhabditis elegans"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0040011 "locomotion"
evidence=IMP] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0040007 "growth" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP]
InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0009792 GO:GO:0040007 GO:GO:0040010 GO:GO:0002119
GO:GO:0003677 GO:GO:0040011 GO:GO:0016568 GO:GO:0040035
GO:GO:0004386 HSSP:Q97XQ5 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR014012 InterPro:IPR006562
Pfam:PF07529 PROSITE:PS51204 GeneTree:ENSGT00530000063427 KO:K11320
EMBL:AL132904 EMBL:AY551965 RefSeq:NP_001255179.1
RefSeq:NP_001255180.1 RefSeq:NP_001255181.1 RefSeq:NP_001255182.1
UniGene:Cel.203 ProteinModelPortal:Q9NEL2 SMR:Q9NEL2
MINT:MINT-3384018 PaxDb:Q9NEL2 EnsemblMetazoa:Y111B2A.22a
GeneID:190954 KEGG:cel:CELE_Y111B2A.22 UCSC:Y111B2A.22 CTD:190954
WormBase:Y111B2A.22a WormBase:Y111B2A.22b WormBase:Y111B2A.22c
WormBase:Y111B2A.22d InParanoid:Q9NEL2 OMA:HLACSES NextBio:947488
ArrayExpress:Q9NEL2 Uniprot:Q9NEL2
Length = 2395
Score = 1229 (437.7 bits), Expect = 4.9e-197, Sum P(6) = 4.9e-197
Identities = 216/322 (67%), Positives = 263/322 (81%)
Query: 432 QPTGITFSTTQVRTKFPFLLKFPLREYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTI 491
QP G T TTQV+T PFL++ LREYQ +GLDW+VT+YEK LNGILADEMGLGKTI TI
Sbjct: 535 QPKGYTLETTQVKTPVPFLIRGQLREYQMVGLDWMVTLYEKNLNGILADEMGLGKTIQTI 594
Query: 492 AMLAHLACEKGIWGPHLIVVPTSVMLNWETEFLKWCPAFKILTYFGSAKERKFKRQGWLK 551
++LAH+AC + IWGPHLIVVPTSV+LNWE EF KWCPA KILTYFG+AKER KR+GW+K
Sbjct: 595 SLLAHMACSESIWGPHLIVVPTSVILNWEMEFKKWCPALKILTYFGTAKERAEKRKGWMK 654
Query: 552 PNSFHVCITTYRLIIQDSKVFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLT 611
PN FHVCIT+Y+ + QD + FK++ W+YLILDEA IKNWKSQRWQ LLN ++RR+LLT
Sbjct: 655 PNCFHVCITSYKTVTQDIRAFKQRAWQYLILDEAQNIKNWKSQRWQALLNVRARRRLLLT 714
Query: 612 GTPLQNDLMELWSLMHFLMPHIFQSHQEFKDWFCNPISGMVEGQEKVNKEVVDRLHNVLR 671
GTPLQN LMELWSLMHFLMP IF SH +FKDWF NP++GM+EG + N ++ RLH VLR
Sbjct: 715 GTPLQNSLMELWSLMHFLMPTIFSSHDDFKDWFSNPLTGMMEGNMEFNAPLIGRLHKVLR 774
Query: 672 PFILRRLKRDVEKQLPMKQEHVIYCRLSKRQRNLYEDFIASSETQATLASANFFGMISVI 731
PFILRRLK++VEKQLP K EH++ C LSKRQR LY+DF++ T+ L S N +++++
Sbjct: 775 PFILRRLKKEVEKQLPEKTEHIVNCSLSKRQRYLYDDFMSRRSTKENLKSGNMMSVLNIV 834
Query: 732 MQLRKVCNHPDLFEGRPIVSSF 753
MQLRK CNHP+LFE RP+V+ F
Sbjct: 835 MQLRKCCNHPNLFEPRPVVAPF 856
Score = 712 (255.7 bits), Expect = 4.9e-197, Sum P(6) = 4.9e-197
Identities = 161/310 (51%), Positives = 200/310 (64%)
Query: 926 LVESFMFAIPAARAPAPVCWCSKSGASVFLQPTYKEKCSEVLSPLL-----FPIRPAIVR 980
LV+ F + A C S SG +++ S LL F R +I
Sbjct: 1114 LVQRFGMYVEPVLTDAWQCRPSSSGLPSYIRNNLSNIELNSRSLLLNTSTNFDTRMSI-S 1172
Query: 981 RQVYFPDRRLIQFDCGKLQELAILLRKLKSDGHRALIFTQMTKMLDILEEFISLYGYTYM 1040
R + FP+ RLI++DCGKLQ LA+LLR+L HR LIFTQM+KMLD+L+ F+S +GY Y
Sbjct: 1173 RALQFPELRLIEYDCGKLQTLAVLLRQLYLYKHRCLIFTQMSKMLDVLQTFLSHHGYQYF 1232
Query: 1041 RLDGSTQPEERQTLMQRFNTNPKIFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQ 1100
RLDG+T E+RQ +M+RFN +PK+F FILSTRSGGVG+NL GADTVIFYDSDWNP MD Q
Sbjct: 1233 RLDGTTGVEQRQAMMERFNADPKVFCFILSTRSGGVGVNLTGADTVIFYDSDWNPTMDAQ 1292
Query: 1101 AQDRCHRIGQTREVHIYRLISESTIEENILKKANQKRALDDLVIQSGGYNTEFFKKLDPM 1160
AQDRCHRIGQTR V IYRLISE TIEENIL+KA QKR L +L I G+ EFFK+ D +
Sbjct: 1293 AQDRCHRIGQTRNVSIYRLISERTIEENILRKATQKRRLGELAIDEAGFTPEFFKQSDSI 1352
Query: 1161 -ELFSGHRTLPMKTMQKEKAINNGNEVSLSNADVEAAL-KCVEDEADYMALKRAEQEEAV 1218
+LF G T + A ++S ++E A+ KC EDEAD A K A E V
Sbjct: 1353 RDLFDGENV--EVTAVADVA------TTMSEKEMEVAMAKC-EDEADVNAAKIAVAEANV 1403
Query: 1219 DNQEFTEEAV 1228
DN EF E+++
Sbjct: 1404 DNAEFDEKSL 1413
Score = 111 (44.1 bits), Expect = 4.9e-197, Sum P(6) = 4.9e-197
Identities = 28/107 (26%), Positives = 55/107 (51%)
Query: 22 VAVNISKDVKKFWMKIEKLVLYKHQMEVDVRKKKALDKQLEFLLGQTERYSSMLAENLVD 81
+ I+K V+ FW +K+V + + ++ R +KA +K L F++GQ + S+++ E LV
Sbjct: 297 MCAGIAKMVRDFWSSTDKVVDIRAKEVLESRLRKARNKHLMFVIGQVDEMSNIVQEGLVS 356
Query: 82 SHKPVQQSPMREQPGIQYKE--ADENGAEEPGVQSKEADE--DDAEQ 124
S K + R+ ++K +D +E + + E + +D Q
Sbjct: 357 SSKSPSIASDRDDKDEEFKAPGSDSESDDEQTIANAEKSQKKEDVRQ 403
Score = 97 (39.2 bits), Expect = 1.1e-132, Sum P(6) = 1.1e-132
Identities = 40/148 (27%), Positives = 60/148 (40%)
Query: 1210 KRAEQEEAVDNQEFTEEAVGRPED-DELVIEDTVRTDEPTDQGGCMTANNDNGMMLTGND 1268
KR E A+D FT E + + +L + V D M+ M D
Sbjct: 1328 KRRLGELAIDEAGFTPEFFKQSDSIRDLFDGENVEVTAVADVATTMSEKEMEVAMAKCED 1387
Query: 1269 PKEERALTFAAKEDDVDMLA-DVKQMXXXXXXXG--EAISSFEN---QLRPIDRYAIRFL 1322
+ A A E +VD D K + G EA + QL+PI+RYAI FL
Sbjct: 1388 EADVNAAKIAVAEANVDNAEFDEKSLPPMSNLQGDEEADEKYMELIQQLKPIERYAINFL 1447
Query: 1323 EL-WDPIIDKTAVESEVKFEEREWELDR 1349
E + P ++ E+E +++ E D+
Sbjct: 1448 ETQYKPEFEEECKEAEALIDQKREEWDK 1475
Score = 46 (21.3 bits), Expect = 2.5e-190, Sum P(6) = 2.5e-190
Identities = 20/105 (19%), Positives = 42/105 (40%)
Query: 180 DIPLQELLKRYAVDKVGRESSAEMGEDEAEPTVVEEGHVQGNGNDLLAGSKLDTSGSLVR 239
DI +E+L+ + +G+ + +V+EG V + + +A + D
Sbjct: 317 DIRAKEVLESRLRKARNKHLMFVIGQVDEMSNIVQEGLVSSSKSPSIASDRDDKDEEFKA 376
Query: 240 RCDEINGGLSISENHLLDIETSQVRDTSKKSGASTQKQALYDFSD 284
+ S E + + E SQ ++ ++ + Q +A D D
Sbjct: 377 PGSDSE---SDDEQTIANAEKSQKKEDVRQEVDALQNEATVDMDD 418
Score = 42 (19.8 bits), Expect = 5.6e-127, Sum P(4) = 5.6e-127
Identities = 13/61 (21%), Positives = 29/61 (47%)
Query: 1880 KSQSLGKHKLSLSDSVKCPKSKLRKTSMEHSEIQHSSPEPVSNQSVATKDANLRF-DLIQ 1938
K + K V K + + +++++E S P+SN ++A+ ++ +LIQ
Sbjct: 1376 KEMEVAMAKCEDEADVNAAKIAVAEANVDNAEFDEKSLPPMSNLQ-GDEEADEKYMELIQ 1434
Query: 1939 E 1939
+
Sbjct: 1435 Q 1435
Score = 42 (19.8 bits), Expect = 6.3e-127, Sum P(5) = 6.3e-127
Identities = 34/184 (18%), Positives = 73/184 (39%)
Query: 1120 ISESTIEENILKKANQK--RALDDLVIQSGGYNTEFFKK-LDPMELFSGHRTLPMKTMQK 1176
+SE +E + K ++ A V ++ N EF +K L PM G K M+
Sbjct: 1373 MSEKEMEVAMAKCEDEADVNAAKIAVAEANVDNAEFDEKSLPPMSNLQGDEEADEKYMEL 1432
Query: 1177 EKAINNGNEVSLSNADVEAALKCVEDEADYMALKRAEQEEAVDNQEFTEEAVGRPEDDEL 1236
+ + +++ + + + E+ + AL ++EE N T + + D L
Sbjct: 1433 IQQLKPIERYAINFLETQYKPEFEEECKEAEALIDQKREEWDKNLNDTA-VIDLDDSDSL 1491
Query: 1237 VIEDTVRTDEPTDQGGCMTANN-----DNGM--MLTGNDPKEERALTFAAKEDDVDMLAD 1289
++ D + + + D+ M L + P + ++D +D++ +
Sbjct: 1492 LLNDPSTSADFYQSSSLLDEIKFYDELDDIMPIWLPPSPPDSDADFDLRMEDDCLDLMYE 1551
Query: 1290 VKQM 1293
++QM
Sbjct: 1552 IEQM 1555
Score = 40 (19.1 bits), Expect = 1.0e-126, Sum P(5) = 1.0e-126
Identities = 13/56 (23%), Positives = 26/56 (46%)
Query: 1090 DSDWNPAMDQQAQDRCHRIGQTREVHIYRLISEST--IEENILKKANQKRALDDLV 1143
D+D++ M+ D + I Q E + ++ E + E +K N A +D++
Sbjct: 1534 DADFDLRMEDDCLDLMYEIEQMNEARLPQVCHEMRRPLAEK-QQKQNTLNAFNDIL 1588
Score = 39 (18.8 bits), Expect = 4.9e-197, Sum P(6) = 4.9e-197
Identities = 13/56 (23%), Positives = 24/56 (42%)
Query: 1880 KSQSLGKHKLSLSDSVKCPKSKLRKTSMEHSEIQHSSPEPVSNQSVATKDANLRFD 1935
+ + LG+ L SD + K K + H+E+ H ++ +S D + D
Sbjct: 1775 RPKELGQ--LVASDPIS---KKTMKVDLSHTELSHLRKGRMTTESQYAHDYGILTD 1825
Score = 39 (18.8 bits), Expect = 6.5e-66, Sum P(6) = 6.5e-66
Identities = 7/18 (38%), Positives = 13/18 (72%)
Query: 669 VLRPFILRRLKRDVEKQL 686
V+ PF++ +L+ DV +L
Sbjct: 852 VVAPFVVEKLQLDVPARL 869
Score = 38 (18.4 bits), Expect = 2.5e-190, Sum P(6) = 2.5e-190
Identities = 10/48 (20%), Positives = 24/48 (50%)
Query: 47 MEVDVRKKKALDKQLEFLLGQTERYSSMLAENLVDSHKPVQQSPMREQ 94
+E+ + + +D+++ ++ + + + LV S PV+Q EQ
Sbjct: 63 LEI-ITPRTPVDRRIPYICSILLTENRSIRDKLVLSSGPVRQEDHEEQ 109
Score = 37 (18.1 bits), Expect = 4.9e-197, Sum P(6) = 4.9e-197
Identities = 6/24 (25%), Positives = 15/24 (62%)
Query: 199 SSAEMGEDEAEPTVVEEGHVQGNG 222
SS+++ ++ + E+G+ G+G
Sbjct: 479 SSSDLTAEQLQDPTAEDGNGDGHG 502
Score = 37 (18.1 bits), Expect = 4.9e-197, Sum P(6) = 4.9e-197
Identities = 10/39 (25%), Positives = 17/39 (43%)
Query: 1513 PVRSPDSDSKLSRKRHDGSTELKTCESIFIDLEQKSASR 1551
P PDSD+ + D C + ++EQ + +R
Sbjct: 1527 PPSPPDSDADFDLRMEDD------CLDLMYEIEQMNEAR 1559
Score = 37 (18.1 bits), Expect = 3.2e-190, Sum P(6) = 3.2e-190
Identities = 12/51 (23%), Positives = 19/51 (37%)
Query: 70 RYSSMLAENLVDSHKPVQQSPMREQPGIQYKEADENGAEEPGVQSKEADED 120
R S + V +P S + P E DE+ E + K+ +D
Sbjct: 12 RISRRTSSRSVADDQPSTSSAVAPPPSPIAIETDEDAVVEEEKKKKKTSDD 62
>POMBASE|SPAC11E3.01c [details] [associations]
symbol:swr1 "SNF2 family helicase Swr1" species:4896
"Schizosaccharomyces pombe" [GO:0000812 "Swr1 complex"
evidence=IDA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0004003
"ATP-dependent DNA helicase activity" evidence=ISM] [GO:0005524
"ATP binding" evidence=ISM] [GO:0005634 "nucleus" evidence=IDA]
[GO:0006338 "chromatin remodeling" evidence=IPI] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0043486 "histone exchange" evidence=ISO] InterPro:IPR000330
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 PomBase:SPAC11E3.01c GO:GO:0005524
EMBL:CU329670 GO:GO:0006355 GenomeReviews:CU329670_GR GO:GO:0003677
GO:GO:0006351 GO:GO:0000812 GO:GO:0004003 GO:GO:0043486
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR014012 PROSITE:PS51204 KO:K11681 HOGENOM:HOG000186095
OrthoDB:EOG49S9FK PIR:T37528 RefSeq:XP_001713118.1
ProteinModelPortal:O13682 STRING:O13682 EnsemblFungi:SPAC11E3.01c.1
GeneID:3361561 KEGG:spo:SPAC11E3.01c OMA:VKNEREG NextBio:20811602
Uniprot:O13682
Length = 1288
Score = 1791 (635.5 bits), Expect = 2.7e-194, Sum P(4) = 2.7e-194
Identities = 383/805 (47%), Positives = 524/805 (65%)
Query: 444 RTKFPFLLKFPLREYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTIAMLAHLACEKGI 503
+ + PFL + LREYQ GL+WL +++ NGILADEMGLGKTI TIA+LAHLACEK
Sbjct: 436 KIQVPFLFRGTLREYQQYGLEWLTALHDSNTNGILADEMGLGKTIQTIALLAHLACEKEN 495
Query: 504 WGPHLIVVPTSVMLNWETEFLKWCPAFKILTYFGSAKERKFKRQGWLKPNSFHVCITTYR 563
WGPHLI+VPTSVMLNWE EF K+ P FKILTY+G+ +ERK KR GW KP+++HVCIT+Y+
Sbjct: 496 WGPHLIIVPTSVMLNWEMEFKKFLPGFKILTYYGNPQERKEKRSGWYKPDTWHVCITSYQ 555
Query: 564 LIIQDSKVFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPLQNDLMELW 623
L++QD + F+RKKW+Y+ILDEAH IKN++SQRWQ+LLNFN++ R+LLTGTPLQN+L+ELW
Sbjct: 556 LVLQDHQPFRRKKWQYMILDEAHNIKNFRSQRWQSLLNFNAEHRLLLTGTPLQNNLVELW 615
Query: 624 SLMHFLMP-------HIFQSHQEFKDWFCNPISGMVEGQEKVNKEVVD---RLHNVLRPF 673
SL++FLMP F + ++F+DWF P+ ++E + +N E ++ +LH VLRP+
Sbjct: 616 SLLYFLMPAGVTQNNSAFANLKDFQDWFSKPMDRLIEEGQDMNPEAMNTVAKLHRVLRPY 675
Query: 674 ILRRLKRDVEKQLPMKQEHVIYCRLSKRQRNLYEDFIASSETQATLASANFFGMISVIMQ 733
+LRRLK +VEKQ+P K EHV+YC+LSKRQR LY+DFI + T+ LAS NF +I+ +MQ
Sbjct: 676 LLRRLKTEVEKQMPAKYEHVVYCQLSKRQRFLYDDFINRARTREILASGNFMSIINCLMQ 735
Query: 734 LRKVCNHPDLFEGRPIVSSFDM-----SGIDXXXXXXXXXXXXXXXXXTADLKGLGLLFT 788
LRKVCNHP+L E RPIV+SF + + ++ DL L L+ T
Sbjct: 736 LRKVCNHPNLHEERPIVTSFALRRSAIADLEIKDLLVRKRLLHEEPMTKLDLSTLRLIRT 795
Query: 789 NLDFSMNSWESDELNAI-ATPA-SLIKERADLNNLEEVGPFCTHRKRLNGTSIFXXXXXX 846
+ + + +++ SDELN++ AT A + I + EE P C +K N F
Sbjct: 796 DSE-AFDTFVSDELNSLCATNAYNRISTFLRMQIDEECKP-CQFKKS-NFKEHFQNKIYQ 852
Query: 847 XXXXXXXXXQDRASSVAWWNSLRCQKKPVYSTSLRELLTV--KHPVC-DI-LQQKTVRRS 902
D+ + + N +C P+Y ++L L KH D L K
Sbjct: 853 EQL-------DKLNFQKYLNESKCSHSPIYGSNLIRLAEKLPKHSTSIDYTLYAKDDPLY 905
Query: 903 YLYSSK-LADIVLSPVERFQRMIGLVESFMFAIP-AARAPAPVCWCSKSGASVFLQPTYK 960
L ++K L +LS ER M +++ F P A P +C + + + K
Sbjct: 906 LLNTTKALRSCILSTEERASNMKEIIQRFACITPKAVVVDLPELFCKTIPRDLLYEVSRK 965
Query: 961 EKCSEVLSPLLFPIRPAIVRRQVYFPDRRLIQFDCGKLQELAILLRKLKSDGHRALIFTQ 1020
+ P+ A R + FPD+RL+Q+DCGKLQ L LL+ L S+GHR LIFTQ
Sbjct: 966 ----------INPLHQASTRLAIAFPDKRLLQYDCGKLQVLDRLLKDLVSNGHRVLIFTQ 1015
Query: 1021 MTKMLDILEEFISLYGYTYMRLDGSTQPEERQTLMQRFNTNPKIFLFILSTRSGGVGINL 1080
MTK+LDILE+F++++G+ Y+RLDG+T+ E+RQ L +RFN + KI +FILSTRSGG+GINL
Sbjct: 1016 MTKVLDILEQFLNIHGHRYLRLDGATKIEQRQILTERFNNDDKIPVFILSTRSGGLGINL 1075
Query: 1081 VGADTVIFYDSDWNPAMDQQAQDRCHRIGQTREVHIYRLISESTIEENILKKANQKRALD 1140
GADTVIFYDSDWNP +D QAQDR HRIGQTR+VHIYRLISE T+E N+L++ANQKR LD
Sbjct: 1076 TGADTVIFYDSDWNPQLDAQAQDRSHRIGQTRDVHIYRLISEYTVESNMLRRANQKRMLD 1135
Query: 1141 DLVIQSGGYNTEFFKKLDPMELFSGHRTLPMKTMQKEKAINNGNEVSLSNADVEAALKCV 1200
+VIQ G + TE+F+K D ++LF L ++++K KA ++ + + E AL
Sbjct: 1136 KIVIQGGEFTTEWFRKADVLDLFD----LDDESLKKVKADSDSGSTK-NEENWEVALAAA 1190
Query: 1201 EDEADYMALKRAEQEEAVDNQEFTE 1225
EDE D A + A +E A++ EF+E
Sbjct: 1191 EDEEDVQAAQVARKESALEQTEFSE 1215
Score = 65 (27.9 bits), Expect = 2.7e-194, Sum P(4) = 2.7e-194
Identities = 33/151 (21%), Positives = 57/151 (37%)
Query: 1177 EKAINNGNEVSLS---NADVEAALKCVEDEADYMALKRAEQEEAVDNQEFTEEAVGRPED 1233
+K + G E + ADV L ++DE+ +K + N+E E A+ ED
Sbjct: 1135 DKIVIQGGEFTTEWFRKADV-LDLFDLDDES-LKKVKADSDSGSTKNEENWEVALAAAED 1192
Query: 1234 DELV-IEDTVRTDEPTDQGGCMTANNDNGMMLTGNDPKEERALTFAAKEDDVDMLADVKQ 1292
+E V R + +Q + M+ + P + T + D + ++
Sbjct: 1193 EEDVQAAQVARKESALEQTEFSETSTPQAMLTKDSTPLSSDSATPGFERDSTEEQSNTND 1252
Query: 1293 MXXXXXXXGEAISSFENQLRPIDRYAIRFLE 1323
M E + + + ID Y I FLE
Sbjct: 1253 MDEDRSELEEDL---DETVGHIDEYMISFLE 1280
Score = 40 (19.1 bits), Expect = 2.7e-194, Sum P(4) = 2.7e-194
Identities = 8/22 (36%), Positives = 13/22 (59%)
Query: 100 KEADENGAEEPGVQSKEADEDD 121
+EA+E +EP E +ED+
Sbjct: 280 EEAEETSDDEPLSSEDEENEDE 301
Score = 37 (18.1 bits), Expect = 2.7e-194, Sum P(4) = 2.7e-194
Identities = 10/35 (28%), Positives = 18/35 (51%)
Query: 36 KIEKLVL--YKHQMEVDVRKKKALDKQLEFLLGQT 68
+I ++L +K D +K K DK++ L +T
Sbjct: 145 RISGMILAHFKRLSGADEKKAKEEDKRIRLLAKRT 179
>SGD|S000002742 [details] [associations]
symbol:SWR1 "Swi2/Snf2-related ATPase structural component of
the SWR1 complex" species:4932 "Saccharomyces cerevisiae"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0000812 "Swr1 complex"
evidence=IDA] [GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0006338 "chromatin
remodeling" evidence=IGI;IMP;IDA] [GO:0005198 "structural molecule
activity" evidence=IMP] [GO:0043486 "histone exchange"
evidence=IMP] InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176
Pfam:PF00271 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SGD:S000002742 GO:GO:0005524 GO:GO:0006355 GO:GO:0003677
GO:GO:0005198 EMBL:BK006938 GO:GO:0006351 GO:GO:0000812
GO:GO:0004386 GO:GO:0043486 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR014012 InterPro:IPR006562
Pfam:PF07529 PROSITE:PS51204 GeneTree:ENSGT00530000063427
EMBL:U51032 KO:K11681 HOGENOM:HOG000186095 OrthoDB:EOG49S9FK
PIR:S70099 RefSeq:NP_010621.1 ProteinModelPortal:Q05471 SMR:Q05471
DIP:DIP-2845N IntAct:Q05471 MINT:MINT-1165514 STRING:Q05471
PaxDb:Q05471 EnsemblFungi:YDR334W GeneID:851934 KEGG:sce:YDR334W
CYGD:YDR334w OMA:APGFKVL NextBio:970001 Genevestigator:Q05471
GermOnline:YDR334W Uniprot:Q05471
Length = 1514
Score = 1768 (627.4 bits), Expect = 1.2e-188, Sum P(3) = 1.2e-188
Identities = 384/829 (46%), Positives = 521/829 (62%)
Query: 448 PFLLKFPLREYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTIAMLAHLACEKGIWGPH 507
P LL+ LR YQ GL+WL ++Y NGILADEMGLGKTI TI++LA+LACEK WGPH
Sbjct: 689 PSLLRGNLRTYQKQGLNWLASLYNNHTNGILADEMGLGKTIQTISLLAYLACEKENWGPH 748
Query: 508 LIVVPTSVMLNWETEFLKWCPAFKILTYFGSAKERKFKRQGWLKPNSFHVCITTYRLIIQ 567
LIVVPTSV+LNWE EF ++ P FK+LTY+GS ++RK KR+GW KP++FHVCI +Y+L++Q
Sbjct: 749 LIVVPTSVLLNWEMEFKRFAPGFKVLTYYGSPQQRKEKRKGWNKPDAFHVCIVSYQLVVQ 808
Query: 568 DSKVFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPLQNDLMELWSLMH 627
D FKRK+W+Y++LDEAH IKN++S RWQ LLNFN++RR+LLTGTPLQN+L ELWSL++
Sbjct: 809 DQHSFKRKRWQYMVLDEAHNIKNFRSTRWQALLNFNTQRRLLLTGTPLQNNLAELWSLLY 868
Query: 628 FLMPHI---------FQSHQEFKDWFCNPISGMVE-----GQEKVNKEVVDRLHNVLRPF 673
FLMP F F+ WF P+ ++E GQ+K K+ V +LH VLRP+
Sbjct: 869 FLMPQTVIDGKKVSGFADLDAFQQWFGRPVDKIIETGQNFGQDKETKKTVAKLHQVLRPY 928
Query: 674 ILRRLKRDVEKQLPMKQEHVIYCRLSKRQRNLYEDFIASSETQATLASANFFGMISVIMQ 733
+LRRLK DVEKQ+P K EH++YC+LSKRQR LY+DF++ ++T+ATLAS NF +++ +MQ
Sbjct: 929 LLRRLKADVEKQMPAKYEHIVYCKLSKRQRFLYDDFMSRAQTKATLASGNFMSIVNCLMQ 988
Query: 734 LRKVCNHPDLFEGRPIVSSFDMSGIDXXXXXXXXXXXXXXXXXTADLKGLGLLFTNLDFS 793
LRKVCNHP+LFE RPI++SF + + + L F NL F+
Sbjct: 989 LRKVCNHPNLFEVRPILTSFVLEHCVASDYKDVERTLLKLFKKNNQVNRVDLDFLNLVFT 1048
Query: 794 MNSWESDELNAIATPASLIKERADLNNLEEVGPFCTHRKRLN---GTSIFXXXXXXXXXX 850
+N + +A + K N +EEV K+L G + F
Sbjct: 1049 LNDKDLTSYHA----EEISKLTCVKNFVEEVNKLRETNKQLQEEFGEASFLNFQDANQYF 1104
Query: 851 XXXXXQDRASSVAWWNSLRCQKKPVYSTSLRELLTVKHPVCDILQQKTVRRSYLYSSKLA 910
Q +V N L+ K R + K+ + D+L K R Y SS +
Sbjct: 1105 KYSNKQKLEGTVDMLNFLKMVNK--LRCDRRPIFG-KNLI-DLLT-KDRRVKYDKSSIID 1159
Query: 911 DIVLSPVE-RFQRMIGLVESFMFAIPAARA--PAPVCWCSKSGASVFLQPTYK--EKCSE 965
+ ++ P++ R ++++F P+A + + +SV K + C E
Sbjct: 1160 NELIKPLQTRVLDNRKIIDTFAVLTPSAVSLDMRKLALGLNDDSSVGENTRLKVMQNCFE 1219
Query: 966 VLSPLLFPIRPAIVRRQVYFPDRRLIQFDCGKLQELAILLRKLKSDGHRALIFTQMTKML 1025
V +PL + + FPD+ L+Q+DCGKLQ+LAILL++LK +GHRALIFTQMTK+L
Sbjct: 1220 VSNPL----HQLQTKLTIAFPDKSLLQYDCGKLQKLAILLQQLKDNGHRALIFTQMTKVL 1275
Query: 1026 DILEEFISLYGYTYMRLDGSTQPEERQTLMQRFNTNPKIFLFILSTRSGGVGINLVGADT 1085
D+LE+F++ +GY YMRLDG+T+ E+RQ L +RFNT+ +I +FILS+RSGG+GINL GADT
Sbjct: 1276 DVLEQFLNYHGYLYMRLDGATKIEDRQILTERFNTDSRITVFILSSRSGGLGINLTGADT 1335
Query: 1086 VIFYDSDWNPAMDQQAQDRCHRIGQTREVHIYRLISESTIEENILKKANQKRALDDLVIQ 1145
VIFYDSDWNPAMD+Q QDRCHRIGQTR+VHIYR +SE TIE NILKKANQKR LD++VIQ
Sbjct: 1336 VIFYDSDWNPAMDKQCQDRCHRIGQTRDVHIYRFVSEHTIESNILKKANQKRQLDNVVIQ 1395
Query: 1146 SGGYNTEFFKKLDPMELFSGHRTLPMKTMQKEKAINNGNEVSLSNA-DVEAALKCVEDEA 1204
G + T++F KL +L LP +K + +V+ + +E L EDE
Sbjct: 1396 EGDFTTDYFSKLSVRDLLGSE--LPENASGGDKPLIADADVAAKDPRQLERLLAQAEDED 1453
Query: 1205 DYMALKRAEQEEAVDNQEF---TEEAVGRPEDD---EL-VIEDTVRTDE 1246
D A A +E +DN +F TE+ E++ EL E T DE
Sbjct: 1454 DVKAANLAMREVEIDNDDFDESTEKKAANEEEENHAELDEYEGTAHVDE 1502
Score = 50 (22.7 bits), Expect = 1.2e-188, Sum P(3) = 1.2e-188
Identities = 26/98 (26%), Positives = 42/98 (42%)
Query: 30 VKKFWMKIEKL--VLYKHQMEV--DVRKKKALDKQLEFLLGQTERYSSMLAENLVDSHKP 85
VKK W EK +L K + E + K+ L K LE T+ + L + D
Sbjct: 417 VKKRWNMAEKAYRILRKDEEEQLKRIEGKQHLSKMLE---KSTQLLEAQLNQVNDDGRS- 472
Query: 86 VQQSPMREQPGIQYKEADENGAEEPGVQSKEADEDDAE 123
+P + + E+D++ +E S E +E DA+
Sbjct: 473 --STPSSDSNDV-LSESDDDMDDELSTSSDEDEEVDAD 507
Score = 49 (22.3 bits), Expect = 1.2e-188, Sum P(3) = 1.2e-188
Identities = 14/64 (21%), Positives = 29/64 (45%)
Query: 196 GRESSAEMGEDEAEPTVVEEGHVQGNGNDLLAGSKLDTSGSLVRRCDEINGGLSISENHL 255
G ES ++ D++E V V+G + L ++D S + R + + + + +
Sbjct: 609 GEESDGDLDLDDSEDFTVNSSSVEG---EELEKDQVDNSAATFERAGDFVHTQNENRDDI 665
Query: 256 LDIE 259
D+E
Sbjct: 666 KDVE 669
Score = 45 (20.9 bits), Expect = 1.2e-184, Sum P(2) = 1.2e-184
Identities = 10/36 (27%), Positives = 18/36 (50%)
Query: 255 LLDIETSQVRDTSKKSGASTQKQALYDFSDEQEDGD 290
LL+ + +QV D + S S+ + SD+ D +
Sbjct: 458 LLEAQLNQVNDDGRSSTPSSDSNDVLSESDDDMDDE 493
Score = 39 (18.8 bits), Expect = 5.3e-184, Sum P(2) = 5.3e-184
Identities = 37/174 (21%), Positives = 60/174 (34%)
Query: 182 PLQELLKRYAVDKVGRESSAEMGEDEAEPTVVEEGHVQGNGNDLLAGSKLDTSGSLVRRC 241
P+Q L KR A + +S E + P + E H+ D +A + + S + +C
Sbjct: 150 PIQHLKKREAAKSLKFKS-----ERKENPLPLHE-HIAEERYDHIAKVE-EPSEAFTIKC 202
Query: 242 DEINGGLSISENHLLD----IETSQVRDTSKKSGASTQKQA--LYDFSDEQEDGD--FVV 293
+ + H D +S+ D KK G +K L +Q + VV
Sbjct: 203 PSDDSSFENTSEHYSDNFYFTTSSEEEDIKKKRGRKKKKPRIKLVVHPPKQTITNPLHVV 262
Query: 294 ATGXXXXXXXXXXXXXXX---XXXDSNNYIDEIALLQKESEIPVEELLARYRKD 344
G + N YIDE L + +E +Y K+
Sbjct: 263 KPGYESLHEYIASFKSLEDDLTLEEYNKYIDEQRRLLSRLKKGIENGALKYDKE 316
>CGD|CAL0001763 [details] [associations]
symbol:orf19.1871 species:5476 "Candida albicans" [GO:0000812
"Swr1 complex" evidence=IEA] [GO:0005198 "structural molecule
activity" evidence=IEA] [GO:0043486 "histone exchange"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176
Pfam:PF00271 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
CGD:CAL0001763 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0003677 GO:GO:0006351 GO:GO:0016568 GO:GO:0004386
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529 PROSITE:PS51204
EMBL:AACQ01000133 EMBL:AACQ01000132 RefSeq:XP_713128.1
RefSeq:XP_713174.1 ProteinModelPortal:Q59U81 STRING:Q59U81
PRIDE:Q59U81 GeneID:3645174 GeneID:3645220 KEGG:cal:CaO19.1871
KEGG:cal:CaO19.9427 KO:K11681 Uniprot:Q59U81
Length = 1641
Score = 723 (259.6 bits), Expect = 2.9e-171, Sum P(5) = 2.9e-171
Identities = 143/254 (56%), Positives = 186/254 (73%)
Query: 973 PIRPAIVRRQVYFPDRRLIQFDCGKLQELAILLRKLKSDGHRALIFTQMTKMLDILEEFI 1032
P A V+ + FPD+ L+Q+DCGKLQ+LA LL++L S GHRALIFTQMTK+LDILE+F+
Sbjct: 1343 PFHKAQVKLSIAFPDKTLLQYDCGKLQKLATLLQELTSQGHRALIFTQMTKVLDILEQFL 1402
Query: 1033 SLYGYTYMRLDGSTQPEERQTLMQRFNTNPKIFLFILSTRSGGVGINLVGADTVIFYDSD 1092
+++GY YMRLDG+T+ E+RQ L ++FN +PKI +FILSTRSGG+GINL GADTVIFYDSD
Sbjct: 1403 NIHGYRYMRLDGATKIEDRQLLTEKFNRDPKIPVFILSTRSGGLGINLTGADTVIFYDSD 1462
Query: 1093 WNPAMDQQAQDRCHRIGQTREVHIYRLISESTIEENILKKANQKRALDDLVIQSGGYNTE 1152
WNPAMD+Q QDRCHRIGQ R+VHIYR +SE TIE NI+KKANQKR LD++VIQ G + T+
Sbjct: 1463 WNPAMDKQCQDRCHRIGQVRDVHIYRFVSEYTIESNIIKKANQKRQLDNVVIQEGEFTTD 1522
Query: 1153 FFKKLDPMELFSGHRTLPMKTMQKEKAINNGNEVSLSNADVEAALKCVEDEADYMALKRA 1212
+F K +L S T ++ I+ + + N +A EDE D +A A
Sbjct: 1523 YFGKFSVRDLVSDSNIGKEIT---DRTIDFSGDAKMGNVLAQA-----EDEEDRVAAGAA 1574
Query: 1213 EQEEAVDNQEFTEE 1226
+E A+D+ +F EE
Sbjct: 1575 LKEVAIDDDDFKEE 1588
Score = 714 (256.4 bits), Expect = 2.9e-171, Sum P(5) = 2.9e-171
Identities = 129/226 (57%), Positives = 172/226 (76%)
Query: 448 PFLLKFPLREYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTIAMLAHLACEKGIWGPH 507
P LL+ LR YQ GL+WL ++Y NGILADEMGLGKTI TI++LA+LACE WGPH
Sbjct: 816 PSLLRGTLRPYQKQGLNWLASLYNNNTNGILADEMGLGKTIQTISLLAYLACEHHKWGPH 875
Query: 508 LIVVPTSVMLNWETEFLKWCPAFKILTYFGSAKERKFKRQGWLKPNSFHVCITTYRLIIQ 567
LI+VPTSVMLNWE EF K+ P FK+LTY+GS ++R KR+GW KP++FHVCIT+Y+L++Q
Sbjct: 876 LIIVPTSVMLNWEMEFKKFAPGFKVLTYYGSPQQRAQKRKGWNKPDAFHVCITSYQLVVQ 935
Query: 568 DSKVFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPLQNDLMELWSLMH 627
D + FKR++W Y+ILDEAH IKN++S RW+ LLNFN++ R+LLTGTPLQN+LMELWSL++
Sbjct: 936 DQQSFKRRRWTYMILDEAHNIKNFRSTRWRALLNFNTENRLLLTGTPLQNNLMELWSLLY 995
Query: 628 FLMPHI---------FQSHQEFKDWFCNPISGMVEGQEKVNKEVVD 664
FLMP F + +F+ WF P++ ++E N +++D
Sbjct: 996 FLMPSSKVNQAMPEGFANLDDFQQWFGKPVNRILEQTSAGNSDLID 1041
Score = 396 (144.5 bits), Expect = 2.9e-171, Sum P(5) = 2.9e-171
Identities = 101/284 (35%), Positives = 146/284 (51%)
Query: 630 MPHIFQSHQEFKDWFCNPISGMVEGQEKVNKEVVD------------------RLHNVLR 671
MP F + +F+ WF P++ ++E N +++D RLH VLR
Sbjct: 1007 MPEGFANLDDFQQWFGKPVNRILEQTSAGNSDLIDENERTTQKMDEETRNTVARLHQVLR 1066
Query: 672 PFILRRLKRDVEKQLPMKQEHVIYCRLSKRQRNLYEDFIASSETQATLASANFFGMISVI 731
P++LRRLK+DVEKQ+P K EH++YCRLSKRQR LY+DF++ ++T+ TLAS NF +I+ +
Sbjct: 1067 PYLLRRLKKDVEKQMPGKYEHIVYCRLSKRQRFLYDDFMSRAKTKETLASGNFLSIINCL 1126
Query: 732 MQLRKVCNHPDLFEGRPIVSSFDM--SGIDXXXXXXXXXXXXXXXXXTADLKGLGLLFTN 789
MQLRKVCNHPDLFE RPIV+SF M S T + L L T
Sbjct: 1127 MQLRKVCNHPDLFEVRPIVTSFAMPRSIPSYYQSTNELVKRQFNKDETVSFQALNLDVTG 1186
Query: 790 LDFSMNSWESDELNAIATPASLIKERADLNNLEEVGPFCTHRKRLNGTSIFXXXXXXXXX 849
+ +MN + + T + +N L+ + + +N S +
Sbjct: 1187 CE-NMNYFVCQSTGKLMTTEPF---QDQINKLKILLVEFENSDPINYVSYYQRLRREEQA 1242
Query: 850 XXXXXXQDRASSVAWWNSLRCQKKPVYSTSLRELLTVK-HPVCD 892
+++ V + N+LRC +KP+Y SL LLTV H D
Sbjct: 1243 EI----KEKLEHVVYLNNLRCGRKPIYGESLLRLLTVNAHDFSD 1282
Score = 47 (21.6 bits), Expect = 2.9e-171, Sum P(5) = 2.9e-171
Identities = 12/37 (32%), Positives = 22/37 (59%)
Query: 259 ETSQVRDTSKKSGASTQKQALYDFSDEQ--EDGDFVV 293
+TS + +KSG++T K+ + S +Q ED D ++
Sbjct: 197 QTSNAKTNIRKSGSTTPKRGNENGSRKQALEDQDEII 233
Score = 44 (20.5 bits), Expect = 3.3e-170, Sum P(6) = 3.3e-170
Identities = 15/43 (34%), Positives = 20/43 (46%)
Query: 193 DKVGRESSAEMGEDEAEPTVVEEGHVQGNGN-DLLAGSKLDTS 234
D V S+ E DE+ + E V GNG D +A + D S
Sbjct: 758 DDVSISSNFENESDESMNSSDRELEVNGNGKIDKIASTDEDDS 800
Score = 43 (20.2 bits), Expect = 7.6e-171, Sum P(5) = 7.6e-171
Identities = 24/98 (24%), Positives = 35/98 (35%)
Query: 38 EKLVLYKHQMEVDVRKKKALDKQLEFLLGQTERYSSMLAENLVDSHKPVQQSPMREQPGI 97
EK ++ E D R LD + +E ++ +D V + P + G
Sbjct: 681 EKKLIEDLNQESDSRMNSLLDSDSVSSISDSESSEESSSDTEMDQ-STVSEPPRSSETGS 739
Query: 98 QYKEAD--ENGAEEPGVQSKEADEDDAEQHSGFEPQLD 133
A NG + S E EDD S FE + D
Sbjct: 740 NTGLASLFTNGT----IVSDE--EDDVSISSNFENESD 771
Score = 41 (19.5 bits), Expect = 2.9e-171, Sum P(5) = 2.9e-171
Identities = 13/53 (24%), Positives = 23/53 (43%)
Query: 1444 ESKAVKEEPSVEPMSIDDDFYDED---ATFSDAMSPPSTSQKKRKKAELALYD 1493
E V +++ ++IDDD + E+ AT +P T+ + A D
Sbjct: 1565 EEDRVAAGAALKEVAIDDDDFKEETRSATTGATPAPTETNALSTTDGDAAFID 1617
Score = 39 (18.8 bits), Expect = 3.3e-170, Sum P(6) = 3.3e-170
Identities = 23/96 (23%), Positives = 39/96 (40%)
Query: 37 IEKLVLYKHQMEVDVRKK-KALDKQLEFLLGQTERYSSMLAENLVDSHKPVQQSPMREQP 95
+E+ ++ K + EV + KA+ Q + G + S + + K +P R
Sbjct: 161 LEESLVNKTRDEVKIESTFKAIQSQEK--AGSKLKTPSQTSNAKTNIRKSGSTTPKRGNE 218
Query: 96 GIQYKEADENGAE------EPGVQSKEADEDDAEQH 125
K+A E+ E + V E+D DAE H
Sbjct: 219 NGSRKQALEDQDEIIELSDDSSVVEIESDLSDAETH 254
Score = 37 (18.1 bits), Expect = 5.4e-170, Sum P(6) = 5.4e-170
Identities = 8/37 (21%), Positives = 20/37 (54%)
Query: 100 KEADENGAEEPGVQSKEADEDDAEQHSGFEPQLDAAD 136
K +ENG+ + ++ ++ + ++ S E + D +D
Sbjct: 214 KRGNENGSRKQALEDQDEIIELSDDSSVVEIESDLSD 250
>UNIPROTKB|F6XHF3 [details] [associations]
symbol:SRCAP "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR000330
Pfam:PF00176 GO:GO:0005524 GO:GO:0003677 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR014012 InterPro:IPR006562
Pfam:PF07529 PROSITE:PS51204 GeneTree:ENSGT00530000063427
EMBL:AAEX03004381 EMBL:AAEX03004385 EMBL:AAEX03004386
Ensembl:ENSCAFT00000026363 EMBL:AAEX03004382 EMBL:AAEX03004383
EMBL:AAEX03004384 EMBL:AAEX03004387 EMBL:AAEX03004388
Uniprot:F6XHF3
Length = 1823
Score = 1318 (469.0 bits), Expect = 4.9e-163, Sum P(6) = 4.9e-163
Identities = 233/327 (71%), Positives = 282/327 (86%)
Query: 432 QPTGITFSTTQVRTKFPFLLKFPLREYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTI 491
QP G T +TTQV+T P LL+ LREYQHIGLDWLVTMYEK+LNGILADEMGLGKTI TI
Sbjct: 601 QPKGYTLATTQVKTPIPLLLRGQLREYQHIGLDWLVTMYEKKLNGILADEMGLGKTIQTI 660
Query: 492 AMLAHLACEKGIWGPHLIVVPTSVMLNWETEFLKWCPAFKILTYFGSAKERKFKRQGWLK 551
++LAHLACEKG WGPHLI+VPTSVMLNWE E +WCP+FKILTY+G+ KERK KRQGW K
Sbjct: 661 SLLAHLACEKGNWGPHLIIVPTSVMLNWEMELKRWCPSFKILTYYGAQKERKLKRQGWTK 720
Query: 552 PNSFHVCITTYRLIIQDSKVFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLT 611
PN+FHVCIT+Y+L++QD + F+RK W+YLILDEA IKN+KSQRWQ+LLNFNS+RR+LLT
Sbjct: 721 PNAFHVCITSYKLVLQDHQAFRRKNWRYLILDEAQNIKNFKSQRWQSLLNFNSQRRLLLT 780
Query: 612 GTPLQNDLMELWSLMHFLMPHIFQSHQEFKDWFCNPISGMVEGQEKVNKEVVDRLHNVLR 671
GTPLQN LMELWSLMHFLMPH+FQSH+EFK+WF NP++GM+EG ++ N+ +V RLH VLR
Sbjct: 781 GTPLQNSLMELWSLMHFLMPHVFQSHREFKEWFSNPLTGMIEGSQEYNEGLVKRLHKVLR 840
Query: 672 PFILRRLKRDVEKQLPMKQEHVIYCRLSKRQRNLYEDFIASSETQATLASANFFGMISVI 731
PF+LRR+K DVEKQ+P K EHVI CRLSKRQR LY+DF+A + T+ TLA+ +F +I+++
Sbjct: 841 PFLLRRVKVDVEKQMPKKYEHVIRCRLSKRQRCLYDDFMAQTTTKETLATGHFMSVINIL 900
Query: 732 MQLRKVCNHPDLFEGRPIVSSFDMSGI 758
MQLRKVCNHP+LF+ RP+ S F GI
Sbjct: 901 MQLRKVCNHPNLFDPRPVTSPFITPGI 927
Score = 173 (66.0 bits), Expect = 4.9e-163, Sum P(6) = 4.9e-163
Identities = 36/110 (32%), Positives = 65/110 (59%)
Query: 22 VAVNISKDVKKFWMKIEKLVLYKHQMEVDVRKKKALDKQLEFLLGQTERYSSMLAENLVD 81
+A ++KDV++FW +EK+V +K Q ++ ++KKALD L+F++GQTE+YS +L+++L
Sbjct: 194 IASTMAKDVRQFWSNVEKVVQFKQQSRLEEKRKKALDLHLDFIVGQTEKYSDLLSQSL-- 251
Query: 82 SHKPVQQSPMREQPGIQYKEADENGAEEPGVQSKEADEDDAEQHSGFEPQ 131
++P+ S P + + A P D++D + F+PQ
Sbjct: 252 -NQPLASSKAGSSPCL----GSSSAASSPPPPVSRLDDEDGD----FQPQ 292
Score = 64 (27.6 bits), Expect = 2.0e-161, Sum P(5) = 2.0e-161
Identities = 17/54 (31%), Positives = 23/54 (42%)
Query: 285 EQEDGDFVVATGXXXXXXXXXXXXXXXXXXDSNNYIDEIALLQKESEIPVEELL 338
+ EDGDF D+ EI LL++E E+P+EELL
Sbjct: 283 DDEDGDFQPQEEEEEDDEETIEVEEQQEGNDAETQRREIELLRREGELPLEELL 336
Score = 60 (26.2 bits), Expect = 5.3e-161, Sum P(5) = 5.3e-161
Identities = 27/120 (22%), Positives = 50/120 (41%)
Query: 180 DIPLQELLKRYA----VDKVGRESSAEMGEDEAEPTVVEEGHVQGNGNDLLAGSKLDTSG 235
++ ++ELL++YA D G S + EDE E + G ++ + S
Sbjct: 440 ELSMEELLQQYAGAYASDASGPGSGSSEEEDEEE-VEANSSDCEAEGATEAEEARPEDSS 498
Query: 236 SLVRRCDEINGGLSISENHLLDIETSQVRDTSKKSGASTQKQALYDFSDEQE--DGDFVV 293
S +E + + H + ETS ++ + +++ +DE+E D DF V
Sbjct: 499 SQSESAEEQSE--EEEDEHSEEEETSGSSESEESESEESEESGSQSQADEEEEEDDDFGV 556
Score = 56 (24.8 bits), Expect = 2.3e-143, Sum P(4) = 2.3e-143
Identities = 17/53 (32%), Positives = 26/53 (49%)
Query: 84 KPVQQSPMREQPGIQYKEA-DENGAEEPGVQSKEADEDDAEQ--HSGFEPQLD 133
+P S E Q +E DE+ EE S E++E ++E+ SG + Q D
Sbjct: 493 RPEDSSSQSESAEEQSEEEEDEHSEEEETSGSSESEESESEESEESGSQSQAD 545
Score = 56 (24.8 bits), Expect = 2.4e-08, Sum P(4) = 2.4e-08
Identities = 14/57 (24%), Positives = 30/57 (52%)
Query: 1442 TSESKAVKEEPSVEPMSIDDDFYDEDATFSDAMSPPSTSQKKRKKAELALYDDEERE 1498
+S+S++ +E+ E +D+ +E+ T + S S S++ + + D+EE E
Sbjct: 498 SSQSESAEEQSEEE----EDEHSEEEETSGSSESEESESEESEESGSQSQADEEEEE 550
Score = 50 (22.7 bits), Expect = 5.7e-07, Sum P(4) = 5.7e-07
Identities = 15/52 (28%), Positives = 25/52 (48%)
Query: 1201 EDEADYMALKRAEQEEAVDNQEFTEEAVGRPEDDELVIEDTVRTDEPTDQGG 1252
E+E D ++ EQ+E D + E + EL +E+ +R+ P GG
Sbjct: 295 EEEDDEETIEVEEQQEGNDAETQRREIELLRREGELPLEELLRSLPPQLLGG 346
Score = 48 (22.0 bits), Expect = 1.6e-142, Sum P(4) = 1.6e-142
Identities = 12/44 (27%), Positives = 23/44 (52%)
Query: 87 QQSPMREQPGI-QYKEADENGAEEPGVQSKEADEDDAEQHSGFE 129
+ S E G + +E++ +EE G QS+ +E++ + G E
Sbjct: 514 EHSEEEETSGSSESEESESEESEESGSQSQADEEEEEDDDFGVE 557
Score = 48 (22.0 bits), Expect = 1.6e-142, Sum P(4) = 1.6e-142
Identities = 11/46 (23%), Positives = 24/46 (52%)
Query: 76 AENLVDSHKPVQQ-SPMREQPGIQYKEADENGAEEPGVQSKEADED 120
+E D H ++ S E + +E++E+G++ + +E D+D
Sbjct: 508 SEEEEDEHSEEEETSGSSESEESESEESEESGSQSQADEEEEEDDD 553
Score = 48 (22.0 bits), Expect = 1.5e-07, Sum P(4) = 1.5e-07
Identities = 21/91 (23%), Positives = 35/91 (38%)
Query: 1443 SESKAVKEEPSVEPMSIDDDFYDEDATFSDAMSPPSTSQKKRKKAELALYDDEEREXXXX 1502
S S ++E VE S D + E AT ++ P +S + E + ++EE E
Sbjct: 463 SGSSEEEDEEEVEANSSDCEA--EGATEAEEARPEDSSSQSESAEEQS--EEEEDEHSEE 518
Query: 1503 XXXXXXXXXXPVRSPDSDSKLSRKRHDGSTE 1533
S +S+ S+ + D E
Sbjct: 519 EETSGSSESEESESEESEESGSQSQADEEEE 549
Score = 48 (22.0 bits), Expect = 1.5e-07, Sum P(4) = 1.5e-07
Identities = 21/95 (22%), Positives = 39/95 (41%)
Query: 1185 EVSLSNADVEAALKCVE---DEADYMALKRAEQ-EEAVDNQEFTEEAVGRPEDDELVIED 1240
E + S+ + E A + E +++ + EQ EE D EE G E +E E+
Sbjct: 475 EANSSDCEAEGATEAEEARPEDSSSQSESAEEQSEEEEDEHSEEEETSGSSESEESESEE 534
Query: 1241 TVRTDEPTDQGGCMTANNDNGM-MLTGNDPKEERA 1274
+ + + ++D G+ L D ++ A
Sbjct: 535 SEESGSQSQADEEEEEDDDFGVEYLLARDEEQSEA 569
Score = 47 (21.6 bits), Expect = 4.9e-163, Sum P(6) = 4.9e-163
Identities = 9/20 (45%), Positives = 15/20 (75%)
Query: 322 EIALLQKESEIPVEELLARY 341
E++ L +E E+ +EELL +Y
Sbjct: 431 ELSELAREGELSMEELLQQY 450
Score = 46 (21.3 bits), Expect = 2.6e-142, Sum P(4) = 2.6e-142
Identities = 12/30 (40%), Positives = 17/30 (56%)
Query: 98 QYKEADENGAEEPGV-QSKEADEDDAEQHS 126
QY A + A PG S+E DE++ E +S
Sbjct: 449 QYAGAYASDASGPGSGSSEEEDEEEVEANS 478
Score = 42 (19.8 bits), Expect = 6.9e-142, Sum P(4) = 6.9e-142
Identities = 9/24 (37%), Positives = 14/24 (58%)
Query: 101 EADENGAEEPGVQSKEADEDDAEQ 124
EA+E E+ QS+ A+E E+
Sbjct: 488 EAEEARPEDSSSQSESAEEQSEEE 511
Score = 41 (19.5 bits), Expect = 7.1e-07, Sum P(4) = 7.1e-07
Identities = 12/38 (31%), Positives = 17/38 (44%)
Query: 1213 EQEEAVDNQEFTEEAVGRPEDDELVIEDTVRTDEPTDQ 1250
E EE V+ EA G E +E ED+ E ++
Sbjct: 469 EDEEEVEANSSDCEAEGATEAEEARPEDSSSQSESAEE 506
Score = 41 (19.5 bits), Expect = 7.1e-07, Sum P(4) = 7.1e-07
Identities = 20/80 (25%), Positives = 30/80 (37%)
Query: 1175 QKEKAINNGNEVSLSNADVEAALKCVEDEADYMALKRAEQEEAVDNQEFTEEAVGRPEDD 1234
Q E A E +++ E E E + E EE+ + EE EDD
Sbjct: 500 QSESAEEQSEEEEDEHSEEEETSGSSESEES----ESEESEESGSQSQADEE---EEEDD 552
Query: 1235 ELVIEDTVRTDEPTDQ--GG 1252
+ +E + DE + GG
Sbjct: 553 DFGVEYLLARDEEQSEADGG 572
Score = 40 (19.1 bits), Expect = 1.1e-145, Sum P(5) = 1.1e-145
Identities = 12/43 (27%), Positives = 21/43 (48%)
Query: 238 VRRCDEINGGLSISENHLLDIE-TSQVRDTSKKSGASTQKQAL 279
V R D+ +G E D E T +V + + + A TQ++ +
Sbjct: 279 VSRLDDEDGDFQPQEEEEEDDEETIEVEEQQEGNDAETQRREI 321
Score = 39 (18.8 bits), Expect = 4.9e-163, Sum P(6) = 4.9e-163
Identities = 13/61 (21%), Positives = 27/61 (44%)
Query: 180 DIPLQELLKRYAVDKVGRESSAEMGEDEAEPTVVEEGHVQGNGNDLLAGSKLDTSGSLVR 239
++PL+ELL+ +G SS + + +G +G + ++ S S+ +
Sbjct: 329 ELPLEELLRSLPPQLLGGPSSPSRTPSSRDSDI-RDGPEEGGEEEPSQVIQVKPSPSVTQ 387
Query: 240 R 240
R
Sbjct: 388 R 388
Score = 39 (18.8 bits), Expect = 1.4e-141, Sum P(4) = 1.4e-141
Identities = 14/51 (27%), Positives = 26/51 (50%)
Query: 82 SHKPVQQSPMREQPGIQYKEADENGAEEP--GVQ---SKEADEDDAEQHSG 127
S +S E+ G Q +ADE E+ GV+ +++ ++ +A+ SG
Sbjct: 525 SESEESESEESEESGSQ-SQADEEEEEDDDFGVEYLLARDEEQSEADGGSG 574
Score = 38 (18.4 bits), Expect = 4.9e-163, Sum P(6) = 4.9e-163
Identities = 7/10 (70%), Positives = 8/10 (80%)
Query: 934 IPAARAPAPV 943
IPA+R P PV
Sbjct: 1067 IPASRPPGPV 1076
Score = 38 (18.4 bits), Expect = 4.9e-163, Sum P(6) = 4.9e-163
Identities = 8/27 (29%), Positives = 18/27 (66%)
Query: 1555 GGKISITAMPVKRVLMIKPEKLKKGNV 1581
G K+++T V+++ + +P L++ NV
Sbjct: 1219 GNKLTLTGAQVRQLAVGQPRPLQR-NV 1244
>UNIPROTKB|E2R6G6 [details] [associations]
symbol:SRCAP "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR000330
Pfam:PF00176 GO:GO:0005524 GO:GO:0003677 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR014012 InterPro:IPR006562
Pfam:PF07529 PROSITE:PS51204 Ensembl:ENSCAFT00000026363
Uniprot:E2R6G6
Length = 1825
Score = 1318 (469.0 bits), Expect = 6.8e-163, Sum P(6) = 6.8e-163
Identities = 233/327 (71%), Positives = 282/327 (86%)
Query: 432 QPTGITFSTTQVRTKFPFLLKFPLREYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTI 491
QP G T +TTQV+T P LL+ LREYQHIGLDWLVTMYEK+LNGILADEMGLGKTI TI
Sbjct: 601 QPKGYTLATTQVKTPIPLLLRGQLREYQHIGLDWLVTMYEKKLNGILADEMGLGKTIQTI 660
Query: 492 AMLAHLACEKGIWGPHLIVVPTSVMLNWETEFLKWCPAFKILTYFGSAKERKFKRQGWLK 551
++LAHLACEKG WGPHLI+VPTSVMLNWE E +WCP+FKILTY+G+ KERK KRQGW K
Sbjct: 661 SLLAHLACEKGNWGPHLIIVPTSVMLNWEMELKRWCPSFKILTYYGAQKERKLKRQGWTK 720
Query: 552 PNSFHVCITTYRLIIQDSKVFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLT 611
PN+FHVCIT+Y+L++QD + F+RK W+YLILDEA IKN+KSQRWQ+LLNFNS+RR+LLT
Sbjct: 721 PNAFHVCITSYKLVLQDHQAFRRKNWRYLILDEAQNIKNFKSQRWQSLLNFNSQRRLLLT 780
Query: 612 GTPLQNDLMELWSLMHFLMPHIFQSHQEFKDWFCNPISGMVEGQEKVNKEVVDRLHNVLR 671
GTPLQN LMELWSLMHFLMPH+FQSH+EFK+WF NP++GM+EG ++ N+ +V RLH VLR
Sbjct: 781 GTPLQNSLMELWSLMHFLMPHVFQSHREFKEWFSNPLTGMIEGSQEYNEGLVKRLHKVLR 840
Query: 672 PFILRRLKRDVEKQLPMKQEHVIYCRLSKRQRNLYEDFIASSETQATLASANFFGMISVI 731
PF+LRR+K DVEKQ+P K EHVI CRLSKRQR LY+DF+A + T+ TLA+ +F +I+++
Sbjct: 841 PFLLRRVKVDVEKQMPKKYEHVIRCRLSKRQRCLYDDFMAQTTTKETLATGHFMSVINIL 900
Query: 732 MQLRKVCNHPDLFEGRPIVSSFDMSGI 758
MQLRKVCNHP+LF+ RP+ S F GI
Sbjct: 901 MQLRKVCNHPNLFDPRPVTSPFITPGI 927
Score = 173 (66.0 bits), Expect = 6.8e-163, Sum P(6) = 6.8e-163
Identities = 36/110 (32%), Positives = 65/110 (59%)
Query: 22 VAVNISKDVKKFWMKIEKLVLYKHQMEVDVRKKKALDKQLEFLLGQTERYSSMLAENLVD 81
+A ++KDV++FW +EK+V +K Q ++ ++KKALD L+F++GQTE+YS +L+++L
Sbjct: 194 IASTMAKDVRQFWSNVEKVVQFKQQSRLEEKRKKALDLHLDFIVGQTEKYSDLLSQSL-- 251
Query: 82 SHKPVQQSPMREQPGIQYKEADENGAEEPGVQSKEADEDDAEQHSGFEPQ 131
++P+ S P + + A P D++D + F+PQ
Sbjct: 252 -NQPLASSKAGSSPCL----GSSSAASSPPPPVSRLDDEDGD----FQPQ 292
Score = 64 (27.6 bits), Expect = 2.6e-161, Sum P(5) = 2.6e-161
Identities = 17/54 (31%), Positives = 23/54 (42%)
Query: 285 EQEDGDFVVATGXXXXXXXXXXXXXXXXXXDSNNYIDEIALLQKESEIPVEELL 338
+ EDGDF D+ EI LL++E E+P+EELL
Sbjct: 283 DDEDGDFQPQEEEEEDDEETIEVEEQQEGNDAETQRREIELLRREGELPLEELL 336
Score = 60 (26.2 bits), Expect = 6.9e-161, Sum P(5) = 6.9e-161
Identities = 27/120 (22%), Positives = 50/120 (41%)
Query: 180 DIPLQELLKRYA----VDKVGRESSAEMGEDEAEPTVVEEGHVQGNGNDLLAGSKLDTSG 235
++ ++ELL++YA D G S + EDE E + G ++ + S
Sbjct: 440 ELSMEELLQQYAGAYASDASGPGSGSSEEEDEEE-VEANSSDCEAEGATEAEEARPEDSS 498
Query: 236 SLVRRCDEINGGLSISENHLLDIETSQVRDTSKKSGASTQKQALYDFSDEQE--DGDFVV 293
S +E + + H + ETS ++ + +++ +DE+E D DF V
Sbjct: 499 SQSESAEEQSE--EEEDEHSEEEETSGSSESEESESEESEESGSQSQADEEEEEDDDFGV 556
Score = 56 (24.8 bits), Expect = 2.9e-143, Sum P(4) = 2.9e-143
Identities = 17/53 (32%), Positives = 26/53 (49%)
Query: 84 KPVQQSPMREQPGIQYKEA-DENGAEEPGVQSKEADEDDAEQ--HSGFEPQLD 133
+P S E Q +E DE+ EE S E++E ++E+ SG + Q D
Sbjct: 493 RPEDSSSQSESAEEQSEEEEDEHSEEEETSGSSESEESESEESEESGSQSQAD 545
Score = 56 (24.8 bits), Expect = 2.5e-08, Sum P(4) = 2.5e-08
Identities = 14/57 (24%), Positives = 30/57 (52%)
Query: 1442 TSESKAVKEEPSVEPMSIDDDFYDEDATFSDAMSPPSTSQKKRKKAELALYDDEERE 1498
+S+S++ +E+ E +D+ +E+ T + S S S++ + + D+EE E
Sbjct: 498 SSQSESAEEQSEEE----EDEHSEEEETSGSSESEESESEESEESGSQSQADEEEEE 550
Score = 50 (22.7 bits), Expect = 5.7e-07, Sum P(4) = 5.7e-07
Identities = 15/52 (28%), Positives = 25/52 (48%)
Query: 1201 EDEADYMALKRAEQEEAVDNQEFTEEAVGRPEDDELVIEDTVRTDEPTDQGG 1252
E+E D ++ EQ+E D + E + EL +E+ +R+ P GG
Sbjct: 295 EEEDDEETIEVEEQQEGNDAETQRREIELLRREGELPLEELLRSLPPQLLGG 346
Score = 48 (22.0 bits), Expect = 2.0e-142, Sum P(4) = 2.0e-142
Identities = 12/44 (27%), Positives = 23/44 (52%)
Query: 87 QQSPMREQPGI-QYKEADENGAEEPGVQSKEADEDDAEQHSGFE 129
+ S E G + +E++ +EE G QS+ +E++ + G E
Sbjct: 514 EHSEEEETSGSSESEESESEESEESGSQSQADEEEEEDDDFGVE 557
Score = 48 (22.0 bits), Expect = 2.0e-142, Sum P(4) = 2.0e-142
Identities = 11/46 (23%), Positives = 24/46 (52%)
Query: 76 AENLVDSHKPVQQ-SPMREQPGIQYKEADENGAEEPGVQSKEADED 120
+E D H ++ S E + +E++E+G++ + +E D+D
Sbjct: 508 SEEEEDEHSEEEETSGSSESEESESEESEESGSQSQADEEEEEDDD 553
Score = 48 (22.0 bits), Expect = 1.5e-07, Sum P(4) = 1.5e-07
Identities = 21/91 (23%), Positives = 35/91 (38%)
Query: 1443 SESKAVKEEPSVEPMSIDDDFYDEDATFSDAMSPPSTSQKKRKKAELALYDDEEREXXXX 1502
S S ++E VE S D + E AT ++ P +S + E + ++EE E
Sbjct: 463 SGSSEEEDEEEVEANSSDCEA--EGATEAEEARPEDSSSQSESAEEQS--EEEEDEHSEE 518
Query: 1503 XXXXXXXXXXPVRSPDSDSKLSRKRHDGSTE 1533
S +S+ S+ + D E
Sbjct: 519 EETSGSSESEESESEESEESGSQSQADEEEE 549
Score = 48 (22.0 bits), Expect = 1.5e-07, Sum P(4) = 1.5e-07
Identities = 21/95 (22%), Positives = 39/95 (41%)
Query: 1185 EVSLSNADVEAALKCVE---DEADYMALKRAEQ-EEAVDNQEFTEEAVGRPEDDELVIED 1240
E + S+ + E A + E +++ + EQ EE D EE G E +E E+
Sbjct: 475 EANSSDCEAEGATEAEEARPEDSSSQSESAEEQSEEEEDEHSEEEETSGSSESEESESEE 534
Query: 1241 TVRTDEPTDQGGCMTANNDNGM-MLTGNDPKEERA 1274
+ + + ++D G+ L D ++ A
Sbjct: 535 SEESGSQSQADEEEEEDDDFGVEYLLARDEEQSEA 569
Score = 47 (21.6 bits), Expect = 6.8e-163, Sum P(6) = 6.8e-163
Identities = 9/20 (45%), Positives = 15/20 (75%)
Query: 322 EIALLQKESEIPVEELLARY 341
E++ L +E E+ +EELL +Y
Sbjct: 431 ELSELAREGELSMEELLQQY 450
Score = 46 (21.3 bits), Expect = 3.3e-142, Sum P(4) = 3.3e-142
Identities = 12/30 (40%), Positives = 17/30 (56%)
Query: 98 QYKEADENGAEEPGV-QSKEADEDDAEQHS 126
QY A + A PG S+E DE++ E +S
Sbjct: 449 QYAGAYASDASGPGSGSSEEEDEEEVEANS 478
Score = 42 (19.8 bits), Expect = 8.6e-142, Sum P(4) = 8.6e-142
Identities = 9/24 (37%), Positives = 14/24 (58%)
Query: 101 EADENGAEEPGVQSKEADEDDAEQ 124
EA+E E+ QS+ A+E E+
Sbjct: 488 EAEEARPEDSSSQSESAEEQSEEE 511
Score = 41 (19.5 bits), Expect = 7.1e-07, Sum P(4) = 7.1e-07
Identities = 12/38 (31%), Positives = 17/38 (44%)
Query: 1213 EQEEAVDNQEFTEEAVGRPEDDELVIEDTVRTDEPTDQ 1250
E EE V+ EA G E +E ED+ E ++
Sbjct: 469 EDEEEVEANSSDCEAEGATEAEEARPEDSSSQSESAEE 506
Score = 41 (19.5 bits), Expect = 7.1e-07, Sum P(4) = 7.1e-07
Identities = 20/80 (25%), Positives = 30/80 (37%)
Query: 1175 QKEKAINNGNEVSLSNADVEAALKCVEDEADYMALKRAEQEEAVDNQEFTEEAVGRPEDD 1234
Q E A E +++ E E E + E EE+ + EE EDD
Sbjct: 500 QSESAEEQSEEEEDEHSEEEETSGSSESEES----ESEESEESGSQSQADEE---EEEDD 552
Query: 1235 ELVIEDTVRTDEPTDQ--GG 1252
+ +E + DE + GG
Sbjct: 553 DFGVEYLLARDEEQSEADGG 572
Score = 40 (19.1 bits), Expect = 1.4e-145, Sum P(5) = 1.4e-145
Identities = 12/43 (27%), Positives = 21/43 (48%)
Query: 238 VRRCDEINGGLSISENHLLDIE-TSQVRDTSKKSGASTQKQAL 279
V R D+ +G E D E T +V + + + A TQ++ +
Sbjct: 279 VSRLDDEDGDFQPQEEEEEDDEETIEVEEQQEGNDAETQRREI 321
Score = 39 (18.8 bits), Expect = 6.8e-163, Sum P(6) = 6.8e-163
Identities = 13/61 (21%), Positives = 27/61 (44%)
Query: 180 DIPLQELLKRYAVDKVGRESSAEMGEDEAEPTVVEEGHVQGNGNDLLAGSKLDTSGSLVR 239
++PL+ELL+ +G SS + + +G +G + ++ S S+ +
Sbjct: 329 ELPLEELLRSLPPQLLGGPSSPSRTPSSRDSDI-RDGPEEGGEEEPSQVIQVKPSPSVTQ 387
Query: 240 R 240
R
Sbjct: 388 R 388
Score = 39 (18.8 bits), Expect = 1.8e-141, Sum P(4) = 1.8e-141
Identities = 14/51 (27%), Positives = 26/51 (50%)
Query: 82 SHKPVQQSPMREQPGIQYKEADENGAEEP--GVQ---SKEADEDDAEQHSG 127
S +S E+ G Q +ADE E+ GV+ +++ ++ +A+ SG
Sbjct: 525 SESEESESEESEESGSQ-SQADEEEEEDDDFGVEYLLARDEEQSEADGGSG 574
Score = 38 (18.4 bits), Expect = 6.8e-163, Sum P(6) = 6.8e-163
Identities = 7/10 (70%), Positives = 8/10 (80%)
Query: 934 IPAARAPAPV 943
IPA+R P PV
Sbjct: 1067 IPASRPPGPV 1076
Score = 38 (18.4 bits), Expect = 6.8e-163, Sum P(6) = 6.8e-163
Identities = 8/27 (29%), Positives = 18/27 (66%)
Query: 1555 GGKISITAMPVKRVLMIKPEKLKKGNV 1581
G K+++T V+++ + +P L++ NV
Sbjct: 1219 GNKLTLTGAQVRQLAVGQPRPLQR-NV 1244
>UNIPROTKB|J9PA15 [details] [associations]
symbol:SRCAP "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR000330
Pfam:PF00176 GO:GO:0005524 GO:GO:0003677 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR014012 InterPro:IPR006562
Pfam:PF07529 PROSITE:PS51204 GeneTree:ENSGT00530000063427
EMBL:AAEX03004381 EMBL:AAEX03004385 EMBL:AAEX03004386
EMBL:AAEX03004382 EMBL:AAEX03004383 EMBL:AAEX03004384
EMBL:AAEX03004387 EMBL:AAEX03004388 Ensembl:ENSCAFT00000048702
Uniprot:J9PA15
Length = 1555
Score = 1318 (469.0 bits), Expect = 6.6e-160, Sum P(5) = 6.6e-160
Identities = 233/327 (71%), Positives = 282/327 (86%)
Query: 432 QPTGITFSTTQVRTKFPFLLKFPLREYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTI 491
QP G T +TTQV+T P LL+ LREYQHIGLDWLVTMYEK+LNGILADEMGLGKTI TI
Sbjct: 601 QPKGYTLATTQVKTPIPLLLRGQLREYQHIGLDWLVTMYEKKLNGILADEMGLGKTIQTI 660
Query: 492 AMLAHLACEKGIWGPHLIVVPTSVMLNWETEFLKWCPAFKILTYFGSAKERKFKRQGWLK 551
++LAHLACEKG WGPHLI+VPTSVMLNWE E +WCP+FKILTY+G+ KERK KRQGW K
Sbjct: 661 SLLAHLACEKGNWGPHLIIVPTSVMLNWEMELKRWCPSFKILTYYGAQKERKLKRQGWTK 720
Query: 552 PNSFHVCITTYRLIIQDSKVFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLT 611
PN+FHVCIT+Y+L++QD + F+RK W+YLILDEA IKN+KSQRWQ+LLNFNS+RR+LLT
Sbjct: 721 PNAFHVCITSYKLVLQDHQAFRRKNWRYLILDEAQNIKNFKSQRWQSLLNFNSQRRLLLT 780
Query: 612 GTPLQNDLMELWSLMHFLMPHIFQSHQEFKDWFCNPISGMVEGQEKVNKEVVDRLHNVLR 671
GTPLQN LMELWSLMHFLMPH+FQSH+EFK+WF NP++GM+EG ++ N+ +V RLH VLR
Sbjct: 781 GTPLQNSLMELWSLMHFLMPHVFQSHREFKEWFSNPLTGMIEGSQEYNEGLVKRLHKVLR 840
Query: 672 PFILRRLKRDVEKQLPMKQEHVIYCRLSKRQRNLYEDFIASSETQATLASANFFGMISVI 731
PF+LRR+K DVEKQ+P K EHVI CRLSKRQR LY+DF+A + T+ TLA+ +F +I+++
Sbjct: 841 PFLLRRVKVDVEKQMPKKYEHVIRCRLSKRQRCLYDDFMAQTTTKETLATGHFMSVINIL 900
Query: 732 MQLRKVCNHPDLFEGRPIVSSFDMSGI 758
MQLRKVCNHP+LF+ RP+ S F GI
Sbjct: 901 MQLRKVCNHPNLFDPRPVTSPFITPGI 927
Score = 173 (66.0 bits), Expect = 6.6e-160, Sum P(5) = 6.6e-160
Identities = 36/110 (32%), Positives = 65/110 (59%)
Query: 22 VAVNISKDVKKFWMKIEKLVLYKHQMEVDVRKKKALDKQLEFLLGQTERYSSMLAENLVD 81
+A ++KDV++FW +EK+V +K Q ++ ++KKALD L+F++GQTE+YS +L+++L
Sbjct: 194 IASTMAKDVRQFWSNVEKVVQFKQQSRLEEKRKKALDLHLDFIVGQTEKYSDLLSQSL-- 251
Query: 82 SHKPVQQSPMREQPGIQYKEADENGAEEPGVQSKEADEDDAEQHSGFEPQ 131
++P+ S P + + A P D++D + F+PQ
Sbjct: 252 -NQPLASSKAGSSPCL----GSSSAASSPPPPVSRLDDEDGD----FQPQ 292
Score = 64 (27.6 bits), Expect = 1.6e-158, Sum P(4) = 1.6e-158
Identities = 17/54 (31%), Positives = 23/54 (42%)
Query: 285 EQEDGDFVVATGXXXXXXXXXXXXXXXXXXDSNNYIDEIALLQKESEIPVEELL 338
+ EDGDF D+ EI LL++E E+P+EELL
Sbjct: 283 DDEDGDFQPQEEEEEDDEETIEVEEQQEGNDAETQRREIELLRREGELPLEELL 336
Score = 60 (26.2 bits), Expect = 4.2e-158, Sum P(4) = 4.2e-158
Identities = 27/120 (22%), Positives = 50/120 (41%)
Query: 180 DIPLQELLKRYA----VDKVGRESSAEMGEDEAEPTVVEEGHVQGNGNDLLAGSKLDTSG 235
++ ++ELL++YA D G S + EDE E + G ++ + S
Sbjct: 440 ELSMEELLQQYAGAYASDASGPGSGSSEEEDEEE-VEANSSDCEAEGATEAEEARPEDSS 498
Query: 236 SLVRRCDEINGGLSISENHLLDIETSQVRDTSKKSGASTQKQALYDFSDEQE--DGDFVV 293
S +E + + H + ETS ++ + +++ +DE+E D DF V
Sbjct: 499 SQSESAEEQSE--EEEDEHSEEEETSGSSESEESESEESEESGSQSQADEEEEEDDDFGV 556
Score = 56 (24.8 bits), Expect = 1.2e-140, Sum P(3) = 1.2e-140
Identities = 17/53 (32%), Positives = 26/53 (49%)
Query: 84 KPVQQSPMREQPGIQYKEA-DENGAEEPGVQSKEADEDDAEQ--HSGFEPQLD 133
+P S E Q +E DE+ EE S E++E ++E+ SG + Q D
Sbjct: 493 RPEDSSSQSESAEEQSEEEEDEHSEEEETSGSSESEESESEESEESGSQSQAD 545
Score = 56 (24.8 bits), Expect = 1.3e-09, Sum P(3) = 1.3e-09
Identities = 14/57 (24%), Positives = 30/57 (52%)
Query: 1442 TSESKAVKEEPSVEPMSIDDDFYDEDATFSDAMSPPSTSQKKRKKAELALYDDEERE 1498
+S+S++ +E+ E +D+ +E+ T + S S S++ + + D+EE E
Sbjct: 498 SSQSESAEEQSEEE----EDEHSEEEETSGSSESEESESEESEESGSQSQADEEEEE 550
Score = 50 (22.7 bits), Expect = 3.4e-08, Sum P(3) = 3.4e-08
Identities = 15/52 (28%), Positives = 25/52 (48%)
Query: 1201 EDEADYMALKRAEQEEAVDNQEFTEEAVGRPEDDELVIEDTVRTDEPTDQGG 1252
E+E D ++ EQ+E D + E + EL +E+ +R+ P GG
Sbjct: 295 EEEDDEETIEVEEQQEGNDAETQRREIELLRREGELPLEELLRSLPPQLLGG 346
Score = 48 (22.0 bits), Expect = 8.1e-140, Sum P(3) = 8.1e-140
Identities = 12/44 (27%), Positives = 23/44 (52%)
Query: 87 QQSPMREQPGI-QYKEADENGAEEPGVQSKEADEDDAEQHSGFE 129
+ S E G + +E++ +EE G QS+ +E++ + G E
Sbjct: 514 EHSEEEETSGSSESEESESEESEESGSQSQADEEEEEDDDFGVE 557
Score = 48 (22.0 bits), Expect = 8.1e-140, Sum P(3) = 8.1e-140
Identities = 11/46 (23%), Positives = 24/46 (52%)
Query: 76 AENLVDSHKPVQQ-SPMREQPGIQYKEADENGAEEPGVQSKEADED 120
+E D H ++ S E + +E++E+G++ + +E D+D
Sbjct: 508 SEEEEDEHSEEEETSGSSESEESESEESEESGSQSQADEEEEEDDD 553
Score = 48 (22.0 bits), Expect = 8.4e-09, Sum P(3) = 8.4e-09
Identities = 21/91 (23%), Positives = 35/91 (38%)
Query: 1443 SESKAVKEEPSVEPMSIDDDFYDEDATFSDAMSPPSTSQKKRKKAELALYDDEEREXXXX 1502
S S ++E VE S D + E AT ++ P +S + E + ++EE E
Sbjct: 463 SGSSEEEDEEEVEANSSDCEA--EGATEAEEARPEDSSSQSESAEEQS--EEEEDEHSEE 518
Query: 1503 XXXXXXXXXXPVRSPDSDSKLSRKRHDGSTE 1533
S +S+ S+ + D E
Sbjct: 519 EETSGSSESEESESEESEESGSQSQADEEEE 549
Score = 48 (22.0 bits), Expect = 8.4e-09, Sum P(3) = 8.4e-09
Identities = 21/95 (22%), Positives = 39/95 (41%)
Query: 1185 EVSLSNADVEAALKCVE---DEADYMALKRAEQ-EEAVDNQEFTEEAVGRPEDDELVIED 1240
E + S+ + E A + E +++ + EQ EE D EE G E +E E+
Sbjct: 475 EANSSDCEAEGATEAEEARPEDSSSQSESAEEQSEEEEDEHSEEEETSGSSESEESESEE 534
Query: 1241 TVRTDEPTDQGGCMTANNDNGM-MLTGNDPKEERA 1274
+ + + ++D G+ L D ++ A
Sbjct: 535 SEESGSQSQADEEEEEDDDFGVEYLLARDEEQSEA 569
Score = 47 (21.6 bits), Expect = 6.6e-160, Sum P(5) = 6.6e-160
Identities = 9/20 (45%), Positives = 15/20 (75%)
Query: 322 EIALLQKESEIPVEELLARY 341
E++ L +E E+ +EELL +Y
Sbjct: 431 ELSELAREGELSMEELLQQY 450
Score = 46 (21.3 bits), Expect = 1.3e-139, Sum P(3) = 1.3e-139
Identities = 12/30 (40%), Positives = 17/30 (56%)
Query: 98 QYKEADENGAEEPGV-QSKEADEDDAEQHS 126
QY A + A PG S+E DE++ E +S
Sbjct: 449 QYAGAYASDASGPGSGSSEEEDEEEVEANS 478
Score = 42 (19.8 bits), Expect = 3.5e-139, Sum P(3) = 3.5e-139
Identities = 9/24 (37%), Positives = 14/24 (58%)
Query: 101 EADENGAEEPGVQSKEADEDDAEQ 124
EA+E E+ QS+ A+E E+
Sbjct: 488 EAEEARPEDSSSQSESAEEQSEEE 511
Score = 41 (19.5 bits), Expect = 4.3e-08, Sum P(3) = 4.3e-08
Identities = 12/38 (31%), Positives = 17/38 (44%)
Query: 1213 EQEEAVDNQEFTEEAVGRPEDDELVIEDTVRTDEPTDQ 1250
E EE V+ EA G E +E ED+ E ++
Sbjct: 469 EDEEEVEANSSDCEAEGATEAEEARPEDSSSQSESAEE 506
Score = 41 (19.5 bits), Expect = 4.3e-08, Sum P(3) = 4.3e-08
Identities = 20/80 (25%), Positives = 30/80 (37%)
Query: 1175 QKEKAINNGNEVSLSNADVEAALKCVEDEADYMALKRAEQEEAVDNQEFTEEAVGRPEDD 1234
Q E A E +++ E E E + E EE+ + EE EDD
Sbjct: 500 QSESAEEQSEEEEDEHSEEEETSGSSESEES----ESEESEESGSQSQADEE---EEEDD 552
Query: 1235 ELVIEDTVRTDEPTDQ--GG 1252
+ +E + DE + GG
Sbjct: 553 DFGVEYLLARDEEQSEADGG 572
Score = 40 (19.1 bits), Expect = 9.4e-143, Sum P(4) = 9.4e-143
Identities = 12/43 (27%), Positives = 21/43 (48%)
Query: 238 VRRCDEINGGLSISENHLLDIE-TSQVRDTSKKSGASTQKQAL 279
V R D+ +G E D E T +V + + + A TQ++ +
Sbjct: 279 VSRLDDEDGDFQPQEEEEEDDEETIEVEEQQEGNDAETQRREI 321
Score = 39 (18.8 bits), Expect = 6.6e-160, Sum P(5) = 6.6e-160
Identities = 13/61 (21%), Positives = 27/61 (44%)
Query: 180 DIPLQELLKRYAVDKVGRESSAEMGEDEAEPTVVEEGHVQGNGNDLLAGSKLDTSGSLVR 239
++PL+ELL+ +G SS + + +G +G + ++ S S+ +
Sbjct: 329 ELPLEELLRSLPPQLLGGPSSPSRTPSSRDSDI-RDGPEEGGEEEPSQVIQVKPSPSVTQ 387
Query: 240 R 240
R
Sbjct: 388 R 388
Score = 39 (18.8 bits), Expect = 7.2e-139, Sum P(3) = 7.2e-139
Identities = 14/51 (27%), Positives = 26/51 (50%)
Query: 82 SHKPVQQSPMREQPGIQYKEADENGAEEP--GVQ---SKEADEDDAEQHSG 127
S +S E+ G Q +ADE E+ GV+ +++ ++ +A+ SG
Sbjct: 525 SESEESESEESEESGSQ-SQADEEEEEDDDFGVEYLLARDEEQSEADGGSG 574
Score = 38 (18.4 bits), Expect = 6.6e-160, Sum P(5) = 6.6e-160
Identities = 7/10 (70%), Positives = 8/10 (80%)
Query: 934 IPAARAPAPV 943
IPA+R P PV
Sbjct: 1067 IPASRPPGPV 1076
>UNIPROTKB|G3N326 [details] [associations]
symbol:LOC788113 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA] InterPro:IPR000330 Pfam:PF00176
GO:GO:0005524 GO:GO:0003677 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529
PROSITE:PS51204 GeneTree:ENSGT00530000063427 EMBL:DAAA02057908
Ensembl:ENSBTAT00000063921 Uniprot:G3N326
Length = 934
Score = 1318 (469.0 bits), Expect = 6.1e-157, Sum P(4) = 6.1e-157
Identities = 233/327 (71%), Positives = 282/327 (86%)
Query: 432 QPTGITFSTTQVRTKFPFLLKFPLREYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTI 491
QP G T +TTQV+T P LL+ LREYQHIGLDWLVTMYEK+LNGILADEMGLGKTI TI
Sbjct: 585 QPKGYTLATTQVKTPIPLLLRGQLREYQHIGLDWLVTMYEKKLNGILADEMGLGKTIQTI 644
Query: 492 AMLAHLACEKGIWGPHLIVVPTSVMLNWETEFLKWCPAFKILTYFGSAKERKFKRQGWLK 551
++LAHLACEKG WGPHLI+VPTSVMLNWE E +WCP+FKILTY+G+ KERK KRQGW K
Sbjct: 645 SLLAHLACEKGNWGPHLIIVPTSVMLNWEMELKRWCPSFKILTYYGAQKERKLKRQGWTK 704
Query: 552 PNSFHVCITTYRLIIQDSKVFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLT 611
PN+FHVCIT+Y+L++QD + F+RK W+YLILDEA IKN+KSQRWQ+LLNFNS+RR+LLT
Sbjct: 705 PNAFHVCITSYKLVLQDHQAFRRKNWRYLILDEAQNIKNFKSQRWQSLLNFNSQRRLLLT 764
Query: 612 GTPLQNDLMELWSLMHFLMPHIFQSHQEFKDWFCNPISGMVEGQEKVNKEVVDRLHNVLR 671
GTPLQN LMELWSLMHFLMPH+FQSH+EFK+WF NP++GM+EG ++ N+ +V RLH VLR
Sbjct: 765 GTPLQNSLMELWSLMHFLMPHVFQSHREFKEWFSNPLTGMIEGSQEYNEGLVKRLHKVLR 824
Query: 672 PFILRRLKRDVEKQLPMKQEHVIYCRLSKRQRNLYEDFIASSETQATLASANFFGMISVI 731
PF+LRR+K DVEKQ+P K EHVI CRLSKRQR LY+DF+A + T+ TLA+ +F +I+++
Sbjct: 825 PFLLRRVKVDVEKQMPKKYEHVIRCRLSKRQRCLYDDFMAQTTTKETLATGHFMSVINIL 884
Query: 732 MQLRKVCNHPDLFEGRPIVSSFDMSGI 758
MQLRKVCNHP+LF+ RP+ S F GI
Sbjct: 885 MQLRKVCNHPNLFDPRPVTSPFITPGI 911
Score = 167 (63.8 bits), Expect = 6.1e-157, Sum P(4) = 6.1e-157
Identities = 35/110 (31%), Positives = 64/110 (58%)
Query: 22 VAVNISKDVKKFWMKIEKLVLYKHQMEVDVRKKKALDKQLEFLLGQTERYSSMLAENLVD 81
+A ++KDV++FW +EK+V +K Q ++ ++KKALD L+F++GQTE+YS +L+++L
Sbjct: 176 IASAMAKDVRQFWSNVEKVVQFKQQSRLEEKRKKALDLHLDFIVGQTEKYSDLLSQSL-- 233
Query: 82 SHKPVQQSPMREQPGIQYKEADENGAEEPGVQSKEADEDDAEQHSGFEPQ 131
++P+ S P + + A P D++ + F+PQ
Sbjct: 234 -NQPLASSKAGSSPCL----GSSSAASSPPPPGSRMDDEAID--GDFQPQ 276
Score = 66 (28.3 bits), Expect = 2.6e-155, Sum P(3) = 2.6e-155
Identities = 32/123 (26%), Positives = 52/123 (42%)
Query: 180 DIPLQELLKRYA------VDKVGRESSAEMGEDEAEPTVVEEGHVQGNGNDLLAGSKLDT 233
++ ++ELL+RYA G SS E EDE E + G + +
Sbjct: 424 ELSMEELLQRYAGAYASDASAPGSGSSEEEDEDEVE---ANSSDCEPEGATEAEEAPQED 480
Query: 234 SGSLVRRCDEINGGLSISENHLLDIETSQVRDTSK---KSGASTQKQALYDFSDEQEDGD 290
S S +E + E H + ETS+ ++ + + +Q Q+ D +E+ED D
Sbjct: 481 SSSQSDSAEEQSE--DEDEEHSEEEETSESSESEESESEESEESQSQSQAD-EEEEEDDD 537
Query: 291 FVV 293
F V
Sbjct: 538 FGV 540
Score = 65 (27.9 bits), Expect = 3.5e-139, Sum P(2) = 3.5e-139
Identities = 21/69 (30%), Positives = 27/69 (39%)
Query: 270 SGASTQKQALYDFSDEQEDGDFVVATGXXXXXXXXXXXXXXXXXXDSNNYIDEIALLQKE 329
S AS+ DE DGDF D+ EI LL++E
Sbjct: 252 SAASSPPPPGSRMDDEAIDGDFQPQEEEEEDDEETIEVEEQQEGNDAETQRREIELLRRE 311
Query: 330 SEIPVEELL 338
E+P+EELL
Sbjct: 312 GELPLEELL 320
Score = 52 (23.4 bits), Expect = 5.9e-08, Sum P(3) = 5.9e-08
Identities = 14/57 (24%), Positives = 29/57 (50%)
Query: 1442 TSESKAVKEEPSVEPMSIDDDFYDEDATFSDAMSPPSTSQKKRKKAELALYDDEERE 1498
+S+S + +E+ E D++ +E+ T + S S S++ + + D+EE E
Sbjct: 482 SSQSDSAEEQSEDE----DEEHSEEEETSESSESEESESEESEESQSQSQADEEEEE 534
Score = 51 (23.0 bits), Expect = 6.1e-157, Sum P(4) = 6.1e-157
Identities = 10/20 (50%), Positives = 15/20 (75%)
Query: 322 EIALLQKESEIPVEELLARY 341
E++ L +E E+ +EELL RY
Sbjct: 415 ELSELAREGELSMEELLQRY 434
Score = 50 (22.7 bits), Expect = 1.3e-137, Sum P(2) = 1.3e-137
Identities = 14/36 (38%), Positives = 20/36 (55%)
Query: 98 QYKEADENGAEEPGV-QSKEADEDDAEQHSG-FEPQ 131
+Y A + A PG S+E DED+ E +S EP+
Sbjct: 433 RYAGAYASDASAPGSGSSEEEDEDEVEANSSDCEPE 468
Score = 50 (22.7 bits), Expect = 5.9e-08, Sum P(3) = 5.9e-08
Identities = 15/52 (28%), Positives = 25/52 (48%)
Query: 1201 EDEADYMALKRAEQEEAVDNQEFTEEAVGRPEDDELVIEDTVRTDEPTDQGG 1252
E+E D ++ EQ+E D + E + EL +E+ +R+ P GG
Sbjct: 279 EEEDDEETIEVEEQQEGNDAETQRREIELLRREGELPLEELLRSLPPQLLGG 330
Score = 50 (22.7 bits), Expect = 1.4e-07, Sum P(4) = 1.4e-07
Identities = 13/54 (24%), Positives = 27/54 (50%)
Query: 1201 EDEADYMALKRAEQEEAVDNQEFTEEAVGRPEDDELVIEDTVRTDEPTDQ--GG 1252
E+ ++ + +E EE+ ++Q ++ EDD+ +E + DE + GG
Sbjct: 503 EETSESSESEESESEESEESQSQSQADEEEEEDDDFGVEYLLARDEEQSEADGG 556
Score = 48 (22.0 bits), Expect = 2.2e-137, Sum P(2) = 2.2e-137
Identities = 13/39 (33%), Positives = 22/39 (56%)
Query: 101 EADENGAEEPGVQSKEADE---DDAEQHSGFEPQLDAAD 136
EA+E E+ QS A+E D+ E+HS E ++++
Sbjct: 472 EAEEAPQEDSSSQSDSAEEQSEDEDEEHSEEEETSESSE 510
Score = 48 (22.0 bits), Expect = 2.2e-07, Sum P(4) = 2.2e-07
Identities = 22/91 (24%), Positives = 35/91 (38%)
Query: 1443 SESKAVKEEPSVEPMSIDDDFYDEDATFSDAMSPPSTSQKKRKKAELALYDDEEREXXXX 1502
S S ++E VE S D + E AT ++ +P S + AE +DE+ E
Sbjct: 447 SGSSEEEDEDEVEANSSDCE--PEGATEAEE-APQEDSSSQSDSAE-EQSEDEDEEHSEE 502
Query: 1503 XXXXXXXXXXPVRSPDSDSKLSRKRHDGSTE 1533
S +S+ S+ + D E
Sbjct: 503 EETSESSESEESESEESEESQSQSQADEEEE 533
Score = 47 (21.6 bits), Expect = 2.8e-137, Sum P(2) = 2.8e-137
Identities = 10/34 (29%), Positives = 19/34 (55%)
Query: 101 EADENGAEEPGVQSKEADEDDAEQHSGFEPQLDA 134
E +E+ EE +S E++E ++E+ + Q A
Sbjct: 495 EDEEHSEEEETSESSESEESESEESEESQSQSQA 528
Score = 47 (21.6 bits), Expect = 2.8e-07, Sum P(4) = 2.8e-07
Identities = 11/47 (23%), Positives = 23/47 (48%)
Query: 1442 TSESKAVKEEPSVEPMSIDDDFYDEDATFSDAMSPPSTSQKKRKKAE 1488
T +A +E+ S + S ++ DED S+ +S+ + ++E
Sbjct: 471 TEAEEAPQEDSSSQSDSAEEQSEDEDEEHSEEEETSESSESEESESE 517
Score = 45 (20.9 bits), Expect = 4.3e-07, Sum P(4) = 4.3e-07
Identities = 22/94 (23%), Positives = 38/94 (40%)
Query: 1179 AINNGNEVSLSNADVEAALKCVEDEADYMALKRAEQEEAVDNQEFTEEAVGRPEDDELVI 1238
A +G+ +VEA E E A + A QE++ + EE ED+E
Sbjct: 444 APGSGSSEEEDEDEVEANSSDCEPEGATEA-EEAPQEDSSSQSDSAEEQ-SEDEDEEHSE 501
Query: 1239 EDTVRTDEPTDQGGCMTANNDNGMMLTGNDPKEE 1272
E+ T E ++ + ++ + D +EE
Sbjct: 502 EE--ETSESSESEESESEESEESQSQSQADEEEE 533
Score = 42 (19.8 bits), Expect = 6.1e-157, Sum P(4) = 6.1e-157
Identities = 14/61 (22%), Positives = 27/61 (44%)
Query: 180 DIPLQELLKRYAVDKVGRESSAEMGEDEAEPTVVEEGHVQGNGNDLLAGSKLDTSGSLVR 239
++PL+ELL+ +G SS G + + +G +G + K+ S+ +
Sbjct: 313 ELPLEELLRSLPPQLLGGPSSPS-GTPSSHESDTRDGPEEGGEEEPSQVLKVKPPPSVTQ 371
Query: 240 R 240
R
Sbjct: 372 R 372
Score = 41 (19.5 bits), Expect = 1.2e-136, Sum P(2) = 1.2e-136
Identities = 13/54 (24%), Positives = 29/54 (53%)
Query: 72 SSMLAENLVDSHKPVQQSPMREQPGIQYKEADENGAEEPGV-QSK-EADEDDAE 123
SS +++ + + + E+ + E++E+ +EE QS+ +ADE++ E
Sbjct: 481 SSSQSDSAEEQSEDEDEEHSEEEETSESSESEESESEESEESQSQSQADEEEEE 534
Score = 38 (18.4 bits), Expect = 2.5e-136, Sum P(2) = 2.5e-136
Identities = 12/59 (20%), Positives = 30/59 (50%)
Query: 69 ERYSSMLAENLVDSHKPVQQSPMREQPGIQYKEADENGAEEPGVQSKEADEDDAEQHSG 127
E +S +E+ + ++S + Q + +E D+ G E + +++ ++ +A+ SG
Sbjct: 502 EEETSESSESEESESEESEESQSQSQADEEEEEDDDFGVEY--LLARDEEQSEADGGSG 558
>MGI|MGI:2444036 [details] [associations]
symbol:Srcap "Snf2-related CREBBP activator protein"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
[GO:0043234 "protein complex" evidence=ISO] InterPro:IPR000330
Pfam:PF00176 MGI:MGI:2444036 GO:GO:0005524 GO:GO:0005634
GO:GO:0005794 GO:GO:0043234 GO:GO:0003677 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR014012 InterPro:IPR006562
Pfam:PF07529 PROSITE:PS51204 GeneTree:ENSGT00530000063427
EMBL:AC136146 EMBL:AC122417 IPI:IPI00988884
ProteinModelPortal:E9Q9V7 SMR:E9Q9V7 Ensembl:ENSMUST00000066582
OMA:VIQDHQA Bgee:E9Q9V7 Uniprot:E9Q9V7
Length = 936
Score = 1318 (469.0 bits), Expect = 4.8e-156, Sum P(3) = 4.8e-156
Identities = 233/327 (71%), Positives = 282/327 (86%)
Query: 432 QPTGITFSTTQVRTKFPFLLKFPLREYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTI 491
QP G T +TTQV+T P LL+ LREYQHIGLDWLVTMYEK+LNGILADEMGLGKTI TI
Sbjct: 587 QPKGYTLATTQVKTPIPLLLRGQLREYQHIGLDWLVTMYEKKLNGILADEMGLGKTIQTI 646
Query: 492 AMLAHLACEKGIWGPHLIVVPTSVMLNWETEFLKWCPAFKILTYFGSAKERKFKRQGWLK 551
++LAHLACEKG WGPHLI+VPTSVMLNWE E +WCP+FKILTY+G+ KERK KRQGW K
Sbjct: 647 SLLAHLACEKGNWGPHLIIVPTSVMLNWEMELKRWCPSFKILTYYGAQKERKLKRQGWTK 706
Query: 552 PNSFHVCITTYRLIIQDSKVFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLT 611
PN+FHVCIT+Y+L++QD + F+RK W+YLILDEA IKN+KSQRWQ+LLNFNS+RR+LLT
Sbjct: 707 PNAFHVCITSYKLVLQDHQAFRRKNWRYLILDEAQNIKNFKSQRWQSLLNFNSQRRLLLT 766
Query: 612 GTPLQNDLMELWSLMHFLMPHIFQSHQEFKDWFCNPISGMVEGQEKVNKEVVDRLHNVLR 671
GTPLQN LMELWSLMHFLMPH+FQSH+EFK+WF NP++GM+EG ++ N+ +V RLH VLR
Sbjct: 767 GTPLQNSLMELWSLMHFLMPHVFQSHREFKEWFSNPLTGMIEGSQEYNEGLVKRLHKVLR 826
Query: 672 PFILRRLKRDVEKQLPMKQEHVIYCRLSKRQRNLYEDFIASSETQATLASANFFGMISVI 731
PF+LRR+K DVEKQ+P K EHVI CRLSKRQR LY+DF+A + T+ TLA+ +F +I+++
Sbjct: 827 PFLLRRVKVDVEKQMPKKYEHVIRCRLSKRQRCLYDDFMAQTTTKETLATGHFMSVINIL 886
Query: 732 MQLRKVCNHPDLFEGRPIVSSFDMSGI 758
MQLRKVCNHP+LF+ RP+ S F GI
Sbjct: 887 MQLRKVCNHPNLFDPRPVTSPFITPGI 913
Score = 170 (64.9 bits), Expect = 4.8e-156, Sum P(3) = 4.8e-156
Identities = 36/110 (32%), Positives = 64/110 (58%)
Query: 22 VAVNISKDVKKFWMKIEKLVLYKHQMEVDVRKKKALDKQLEFLLGQTERYSSMLAENLVD 81
+A ++KDV++FW +EK+V +K Q ++ ++KKALD L+F++GQTE+YS +L+++L
Sbjct: 175 IASTMAKDVRQFWSNVEKVVQFKQQSRLEEKRKKALDLHLDFIVGQTEKYSDLLSQSL-- 232
Query: 82 SHKPVQQSPMREQPGIQYKEADENGAEEPGVQSKEADEDDAEQHSGFEPQ 131
++P S P + + A P D++D + F+PQ
Sbjct: 233 -NQPPASSKAGSSPCL----GSSSAASSPPPPVSRLDDEDGD----FQPQ 273
Score = 70 (29.7 bits), Expect = 4.8e-156, Sum P(3) = 4.8e-156
Identities = 27/114 (23%), Positives = 47/114 (41%)
Query: 180 DIPLQELLKRYAVDKVGRESSAEMGEDEAEPTVVEEGHVQGNGNDLLAGSKLDTSGSL-- 237
++ ++ELL++YA ++SA D + VE G + + + + S S
Sbjct: 420 ELSMEELLQQYA-GAYACDASAPASGDSEDEDEVEANSSDGELEETVEEAAQEDSSSQSD 478
Query: 238 -VRRCDEINGGLSISENHLLDIETSQVRDTSKKSGASTQKQALYDFSDEQEDGD 290
C E SE + S+ ++ + A +Q QA + DE ED D
Sbjct: 479 SAEECSEDEED-EHSEEEMSGSSQSEESESDESEDAQSQSQADEEQDDEGEDDD 531
Score = 61 (26.5 bits), Expect = 4.2e-155, Sum P(3) = 4.2e-155
Identities = 17/54 (31%), Positives = 22/54 (40%)
Query: 285 EQEDGDFVVATGXXXXXXXXXXXXXXXXXXDSNNYIDEIALLQKESEIPVEELL 338
+ EDGDF D+ EI LL+ E E+P+EELL
Sbjct: 264 DDEDGDFQPQEEEEEDDEETIEVEEQQEGNDAETQRREIELLRHEGELPLEELL 317
Score = 57 (25.1 bits), Expect = 7.1e-10, Sum P(3) = 7.1e-10
Identities = 23/114 (20%), Positives = 49/114 (42%)
Query: 1189 SNADVEAALKCVEDEAD------YMALKRAEQEEAVDNQEFTEEAVGRPEDDELVIEDTV 1242
S++ ++A +C EDE D ++E+ E+ ++++ ++ E D+ +D V
Sbjct: 473 SSSQSDSAEECSEDEEDEHSEEEMSGSSQSEESESDESEDAQSQSQADEEQDDEGEDDDV 532
Query: 1243 RTDEPTDQG-GCMTANNDNGMMLTGND--PKEERALTFAAKEDDVDMLADVKQM 1293
D+ G + A +D + G P T K++ D+ A + +
Sbjct: 533 DDDDDDGFGVEYLLARDDERSEVDGGSGPPTPGPTTTLGPKKEITDIAAAAESL 586
Score = 50 (22.7 bits), Expect = 6.4e-08, Sum P(2) = 6.4e-08
Identities = 15/52 (28%), Positives = 25/52 (48%)
Query: 1201 EDEADYMALKRAEQEEAVDNQEFTEEAVGRPEDDELVIEDTVRTDEPTDQGG 1252
E+E D ++ EQ+E D + E + EL +E+ +R+ P GG
Sbjct: 276 EEEDDEETIEVEEQQEGNDAETQRREIELLRHEGELPLEELLRSLPPQLLGG 327
Score = 49 (22.3 bits), Expect = 8.1e-08, Sum P(2) = 8.1e-08
Identities = 29/129 (22%), Positives = 52/129 (40%)
Query: 1122 ESTIEENILKKAN----QKRALDDLVIQSGGYNTEFFKKLDPMELFSGHRTLPMKTMQKE 1177
E TIE ++ N Q+R ++ L+ G E + P +L G + P +T +
Sbjct: 281 EETIEVEEQQEGNDAETQRREIE-LLRHEGELPLEELLRSLPPQLLGGPFS-PSQTPSHD 338
Query: 1178 KAINNGNEVSLSNADVEAALKCVEDEADYMALKRAEQEEAVDNQEFTEEAVGRPEDDELV 1237
+G E ++ + L+ + + D++EFT E+DE
Sbjct: 339 SDTQDGPEENIEE-EPSQDLEVHPPSSAVTQCNKQRWHPDEDDEEFT---ANEDEEDE-- 392
Query: 1238 IEDTVRTDE 1246
EDT+ +E
Sbjct: 393 -EDTIAAEE 400
Score = 47 (21.6 bits), Expect = 1.3e-153, Sum P(3) = 1.3e-153
Identities = 9/20 (45%), Positives = 15/20 (75%)
Query: 322 EIALLQKESEIPVEELLARY 341
E++ L +E E+ +EELL +Y
Sbjct: 411 ELSELAREGELSMEELLQQY 430
Score = 41 (19.5 bits), Expect = 1.2e-136, Sum P(2) = 1.2e-136
Identities = 7/27 (25%), Positives = 15/27 (55%)
Query: 100 KEADENGAEEPGVQSKEADEDDAEQHS 126
+EA + + ++E ED+ ++HS
Sbjct: 466 EEAAQEDSSSQSDSAEECSEDEEDEHS 492
Score = 40 (19.1 bits), Expect = 9.4e-143, Sum P(4) = 9.4e-143
Identities = 12/43 (27%), Positives = 21/43 (48%)
Query: 238 VRRCDEINGGLSISENHLLDIE-TSQVRDTSKKSGASTQKQAL 279
V R D+ +G E D E T +V + + + A TQ++ +
Sbjct: 260 VSRLDDEDGDFQPQEEEEEDDEETIEVEEQQEGNDAETQRREI 302
Score = 40 (19.1 bits), Expect = 1.5e-136, Sum P(2) = 1.5e-136
Identities = 13/38 (34%), Positives = 20/38 (52%)
Query: 101 EADENGAEEPG--VQSKEADED---DAEQHSGFEPQLD 133
E DE+ EE QS+E++ D DA+ S + + D
Sbjct: 487 EEDEHSEEEMSGSSQSEESESDESEDAQSQSQADEEQD 524
Score = 40 (19.1 bits), Expect = 1.5e-136, Sum P(2) = 1.5e-136
Identities = 11/44 (25%), Positives = 18/44 (40%)
Query: 93 EQPGIQYKEADENGAEEPGVQSKEADEDDAEQHSGFEPQLDAAD 136
E G E E+ E +ADE+ ++ G + +D D
Sbjct: 495 EMSGSSQSEESESDESEDAQSQSQADEEQDDE--GEDDDVDDDD 536
Score = 38 (18.4 bits), Expect = 9.4e-143, Sum P(4) = 9.4e-143
Identities = 10/41 (24%), Positives = 15/41 (36%)
Query: 179 TDIPLQELLKRYAVDKVGRESSAEMGEDEAEPTVVEEGHVQ 219
T +PL+ +A D V R E E E ++
Sbjct: 48 TTVPLEGFSLSHAADLVNRGQKWEKSHAEIAEQAKHEAEIE 88
>GENEDB_PFALCIPARUM|PF08_0048 [details] [associations]
symbol:PF08_0048 "ATP-dependent helicase,
putative" species:5833 "Plasmodium falciparum" [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] InterPro:IPR000330
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0016020 GO:GO:0006355 GO:GO:0003677 GO:GO:0006351
GO:GO:0016568 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529
PROSITE:PS51204 GO:GO:0008026 KO:K01509 EMBL:AL844507
RefSeq:XP_002808863.1 EnsemblProtists:PF08_0048:mRNA GeneID:2655499
KEGG:pfa:PF08_0048 EuPathDB:PlasmoDB:PF3D7_0820000 Uniprot:C0H4W3
Length = 2082
Score = 958 (342.3 bits), Expect = 4.0e-142, Sum P(5) = 4.0e-142
Identities = 164/311 (52%), Positives = 240/311 (77%)
Query: 445 TKFPFLLKFPLREYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTIAMLAHLACEKGIW 504
TK P ++K LR+YQH GL WL+ +Y+ +NGILADEMGLGKT+ I++L++LA IW
Sbjct: 652 TKIPPIIKATLRDYQHAGLHWLLYLYKNNINGILADEMGLGKTLQCISLLSYLAYYFNIW 711
Query: 505 GPHLIVVPTSVMLNWETEFLKWCPAFKILTYFGSAKERKFKRQGWLKPNSFHVCITTYRL 564
GPHL++VPTS+++NWE E ++CP FKIL+Y+G+ ER KR GW +SFH+CI++Y
Sbjct: 712 GPHLVIVPTSILINWEIELKRFCPCFKILSYYGNQNERYKKRVGWFNKDSFHICISSYST 771
Query: 565 IIQDSKVFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPLQNDLMELWS 624
+++D VFKRK+WKY+ILDEAH IKN+ ++RW +L+ +L+TGTPLQN L ELWS
Sbjct: 772 VVKDHLVFKRKRWKYIILDEAHNIKNFNTKRWNIILSLKRDNCLLITGTPLQNSLEELWS 831
Query: 625 LMHFLMPHIFQSHQEFKDWFCNPISGMVEGQEKVN--KEVVDRLHNVLRPFILRRLKRDV 682
L+HFLMP+IF SH +FK+WF +P++ +E + K++ KE++DRLH V+RP+ILRRLK++V
Sbjct: 832 LLHFLMPNIFTSHLDFKEWFSDPLNLAIE-KSKIHHSKELIDRLHTVIRPYILRRLKKNV 890
Query: 683 EKQLPMKQEHVIYCRLSKRQRNLYEDFIASSETQATLASANFFGMISVIMQLRKVCNHPD 742
EK++P K EH+I C+L++RQ+ LY++FI + Q TL + N+ G++++++QLRKVCNH D
Sbjct: 891 EKEMPNKYEHIIKCKLTRRQQILYDEFINNKNVQNTLNTGNYIGLMNILIQLRKVCNHCD 950
Query: 743 LFEGRPIVSSF 753
LF + I + +
Sbjct: 951 LFTNKYIQTPY 961
Score = 494 (179.0 bits), Expect = 4.0e-142, Sum P(5) = 4.0e-142
Identities = 91/174 (52%), Positives = 127/174 (72%)
Query: 977 AIVRRQVYFPDRRLIQFDCGKLQELAILLRKLKSDGHRALIFTQMTKMLDILEEFISLYG 1036
A +++ + FP + I GKL L LL K K +G++ L+FTQ KMLDILE F++
Sbjct: 1749 AFLKQSIIFPLNKDISLGSGKLCALEKLLSKCKREGNKCLLFTQFIKMLDILEIFLNHLN 1808
Query: 1037 YTYMRLDGSTQPEERQTLMQRFNTNPKIFLFILSTRSGGVGINLVGADTVIFYDSDWNPA 1096
Y+++RLDGST+ E+RQ ++ +FN + IF+FI STRSG +GINL A+ VIFYD+DWNP+
Sbjct: 1809 YSFIRLDGSTKVEQRQKIVTKFNNDKSIFIFISSTRSGSIGINLTAANVVIFYDTDWNPS 1868
Query: 1097 MDQQAQDRCHRIGQTREVHIYRLISESTIEENILKKANQKRALDDLVIQSGGYN 1150
+D+QA DRCHRIGQT++VH++R + E T+EENI KK QKR LD++ I G +N
Sbjct: 1869 IDKQAMDRCHRIGQTKDVHVFRFVCEYTVEENIWKKQLQKRKLDNICINMGNFN 1922
Score = 63 (27.2 bits), Expect = 4.0e-142, Sum P(5) = 4.0e-142
Identities = 30/118 (25%), Positives = 51/118 (43%)
Query: 25 NISKDVKKFWMKIEKLVLY--KHQMEVDVRKKKALDKQLEFLLGQTERYSSMLAENLVD- 81
NIS + FW KIEKLV K +++ + KKK + + +F+ ++ N +
Sbjct: 139 NISSYMDVFWKKIEKLVWEEKKRELQQTLNKKKEM-RFKKFVKEAIKKIKDARHNNAHEL 197
Query: 82 -SHKPVQQSPMREQPGIQYKEAD-ENGAEEPGVQSKEADEDDAEQHSGF-EPQLDAAD 136
+K V S + + +NG +E KE D D E+ + Q+ + D
Sbjct: 198 FENKYVSMSSNNNSEIVNNNASSVDNGDKE----LKEDDLTDQEEEDYLLDEQMSSTD 251
Score = 62 (26.9 bits), Expect = 4.0e-142, Sum P(5) = 4.0e-142
Identities = 29/113 (25%), Positives = 48/113 (42%)
Query: 180 DIPLQELLKRYAVDKVGRESSAEM-GEDEA-EPTVVEEGHVQGNGNDLLAGSKLDTSGSL 237
++P++ELLKR K G + M ED+A E V+E H ND +G ++ G
Sbjct: 268 NLPIEELLKRMYGFKSGEDYINFMENEDDANEENVIETSH-----NDEKSGD--NSIGED 320
Query: 238 VRRCDEINGGLSISENHLLDIETSQVRDTSKKSGASTQKQALYDFSDEQEDGD 290
DE G +I E+ + E S + + K + ++ + D
Sbjct: 321 DNNNDEKGGDNNIDEDDNNNDEKSGDNSIGEDDNNNDHKSGDNNIDEDDNNND 373
Score = 61 (26.5 bits), Expect = 5.1e-142, Sum P(5) = 5.1e-142
Identities = 12/26 (46%), Positives = 18/26 (69%)
Query: 315 DSNNYIDEIALLQKESEIPVEELLAR 340
+S N +EI +L E+ +P+EELL R
Sbjct: 252 ESENKEEEINMLDDEANLPIEELLKR 277
Score = 59 (25.8 bits), Expect = 4.0e-142, Sum P(5) = 4.0e-142
Identities = 25/83 (30%), Positives = 39/83 (46%)
Query: 1149 YNTEFFKKLDPM-ELFSGHRTLPMKT-MQKEKAINNGNE-VSLSNADVEAALKCVEDEAD 1205
+N ++F +D + E+F + M K++ ++ E N E L+ VED+ D
Sbjct: 1937 HNKDWFTNVDTIKEVFINKKNNDDDDDMYKDRLLHEQVENKDKMNVRFEKTLEHVEDKDD 1996
Query: 1206 YMAL---KRAEQEEAVDN-QEFT 1224
AL K+ Q E N QEFT
Sbjct: 1997 IRALNETKKETQNEISQNMQEFT 2019
Score = 45 (20.9 bits), Expect = 5.1e-93, Sum P(5) = 5.1e-93
Identities = 8/16 (50%), Positives = 11/16 (68%)
Query: 1151 TEFFKKLDPMELFSGH 1166
T+F K LD +E+F H
Sbjct: 1791 TQFIKMLDILEIFLNH 1806
Score = 44 (20.5 bits), Expect = 1.7e-138, Sum P(4) = 1.7e-138
Identities = 20/83 (24%), Positives = 41/83 (49%)
Query: 48 EVDVRKKKALDKQLEFLLGQTERYSSMLAENLVDSHKP--VQQSPMREQPGIQ-YKEADE 104
E ++ ++ L + F G E Y + + EN D+++ ++ S E+ G E D
Sbjct: 266 EANLPIEELLKRMYGFKSG--EDYINFM-ENEDDANEENVIETSHNDEKSGDNSIGEDDN 322
Query: 105 NGAEEPGVQSKEADEDDAEQHSG 127
N E+ G + + D+++ ++ SG
Sbjct: 323 NNDEKGGDNNIDEDDNNNDEKSG 345
Score = 41 (19.5 bits), Expect = 3.5e-138, Sum P(4) = 3.5e-138
Identities = 9/44 (20%), Positives = 19/44 (43%)
Query: 93 EQPGIQYKEADENGAEEPGVQSKEADEDDAEQHSGFEPQLDAAD 136
E+ G + D+N +E + ++D+ H + +D D
Sbjct: 326 EKGGDNNIDEDDNNNDEKSGDNSIGEDDNNNDHKSGDNNIDEDD 369
Score = 40 (19.1 bits), Expect = 4.5e-138, Sum P(4) = 4.5e-138
Identities = 8/34 (23%), Positives = 15/34 (44%)
Query: 103 DENGAEEPGVQSKEADEDDAEQHSGFEPQLDAAD 136
D+N +E G + + D+ H + +D D
Sbjct: 384 DDNNNDEKGGDNNIDENDNNSDHKSEDNNIDEND 417
Score = 40 (19.1 bits), Expect = 3.4e-93, Sum P(4) = 3.4e-93
Identities = 31/145 (21%), Positives = 56/145 (38%)
Query: 1654 PDNSINEKTSNVGSGKALLKVTEDNVRTLLNVAAEQEDNELLLQKH--FTALLSSVWRMK 1711
P++ IN +N SG K +E + + + DN + H LLS K
Sbjct: 1085 PNDPINNMNNNP-SG--FTKTSEQ----FGQIVSHERDNNYHMMDHNNMNNLLS-----K 1132
Query: 1712 SRMGCRQNFSSSRNGLYLGG-SFFSSVTQTSCKSTRE-PARRV---KFTNL---GQSSKL 1763
+ +N +S N Y + ++ +QTS ++ ++ F N+ G K
Sbjct: 1133 EMVNSLRNDDNSNNNFYKYSLTSNNNDSQTSIHDNKQCDYNKLCADTFNNINSIGNEEKR 1192
Query: 1764 LSAALHDANSRQQDDKVSNFDRRED 1788
L++ N+ D +N D +
Sbjct: 1193 SLNVLNEQNNNNSKDNNNNIDNNNN 1217
Score = 39 (18.8 bits), Expect = 5.7e-138, Sum P(4) = 5.7e-138
Identities = 13/48 (27%), Positives = 24/48 (50%)
Query: 44 KHQMEVDVRKKKALDKQLEFLL--GQTERYSSMLAENLV-DSHKPVQQ 88
+H+ E D K+ ++K+ E +L E S +E++ DS Q+
Sbjct: 503 EHEYESDNYDKEKINKKKELILLKNDIENDSDETSEHIKRDSRSSCQK 550
Score = 38 (18.4 bits), Expect = 5.1e-93, Sum P(5) = 5.1e-93
Identities = 6/11 (54%), Positives = 9/11 (81%)
Query: 1325 WDPIIDKTAVE 1335
W+P IDK A++
Sbjct: 1865 WNPSIDKQAMD 1875
Score = 38 (18.4 bits), Expect = 5.6e-93, Sum P(4) = 5.6e-93
Identities = 8/23 (34%), Positives = 13/23 (56%)
Query: 1642 FRELIQRYILSVPDNSINEKTSN 1664
++E I + ILS D + E +N
Sbjct: 1379 YKEYIPKNILSFSDEFLTELNNN 1401
>UNIPROTKB|C0H4W3 [details] [associations]
symbol:PF08_0048 "Probable ATP-dependent helicase
PF08_0048" species:36329 "Plasmodium falciparum 3D7" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005737 "cytoplasm" evidence=NAS] [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0016020
"membrane" evidence=NAS] InterPro:IPR000330 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0016020
GO:GO:0006355 GO:GO:0003677 GO:GO:0006351 GO:GO:0016568
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529 PROSITE:PS51204
GO:GO:0008026 KO:K01509 EMBL:AL844507 RefSeq:XP_002808863.1
EnsemblProtists:PF08_0048:mRNA GeneID:2655499 KEGG:pfa:PF08_0048
EuPathDB:PlasmoDB:PF3D7_0820000 Uniprot:C0H4W3
Length = 2082
Score = 958 (342.3 bits), Expect = 4.0e-142, Sum P(5) = 4.0e-142
Identities = 164/311 (52%), Positives = 240/311 (77%)
Query: 445 TKFPFLLKFPLREYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTIAMLAHLACEKGIW 504
TK P ++K LR+YQH GL WL+ +Y+ +NGILADEMGLGKT+ I++L++LA IW
Sbjct: 652 TKIPPIIKATLRDYQHAGLHWLLYLYKNNINGILADEMGLGKTLQCISLLSYLAYYFNIW 711
Query: 505 GPHLIVVPTSVMLNWETEFLKWCPAFKILTYFGSAKERKFKRQGWLKPNSFHVCITTYRL 564
GPHL++VPTS+++NWE E ++CP FKIL+Y+G+ ER KR GW +SFH+CI++Y
Sbjct: 712 GPHLVIVPTSILINWEIELKRFCPCFKILSYYGNQNERYKKRVGWFNKDSFHICISSYST 771
Query: 565 IIQDSKVFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPLQNDLMELWS 624
+++D VFKRK+WKY+ILDEAH IKN+ ++RW +L+ +L+TGTPLQN L ELWS
Sbjct: 772 VVKDHLVFKRKRWKYIILDEAHNIKNFNTKRWNIILSLKRDNCLLITGTPLQNSLEELWS 831
Query: 625 LMHFLMPHIFQSHQEFKDWFCNPISGMVEGQEKVN--KEVVDRLHNVLRPFILRRLKRDV 682
L+HFLMP+IF SH +FK+WF +P++ +E + K++ KE++DRLH V+RP+ILRRLK++V
Sbjct: 832 LLHFLMPNIFTSHLDFKEWFSDPLNLAIE-KSKIHHSKELIDRLHTVIRPYILRRLKKNV 890
Query: 683 EKQLPMKQEHVIYCRLSKRQRNLYEDFIASSETQATLASANFFGMISVIMQLRKVCNHPD 742
EK++P K EH+I C+L++RQ+ LY++FI + Q TL + N+ G++++++QLRKVCNH D
Sbjct: 891 EKEMPNKYEHIIKCKLTRRQQILYDEFINNKNVQNTLNTGNYIGLMNILIQLRKVCNHCD 950
Query: 743 LFEGRPIVSSF 753
LF + I + +
Sbjct: 951 LFTNKYIQTPY 961
Score = 494 (179.0 bits), Expect = 4.0e-142, Sum P(5) = 4.0e-142
Identities = 91/174 (52%), Positives = 127/174 (72%)
Query: 977 AIVRRQVYFPDRRLIQFDCGKLQELAILLRKLKSDGHRALIFTQMTKMLDILEEFISLYG 1036
A +++ + FP + I GKL L LL K K +G++ L+FTQ KMLDILE F++
Sbjct: 1749 AFLKQSIIFPLNKDISLGSGKLCALEKLLSKCKREGNKCLLFTQFIKMLDILEIFLNHLN 1808
Query: 1037 YTYMRLDGSTQPEERQTLMQRFNTNPKIFLFILSTRSGGVGINLVGADTVIFYDSDWNPA 1096
Y+++RLDGST+ E+RQ ++ +FN + IF+FI STRSG +GINL A+ VIFYD+DWNP+
Sbjct: 1809 YSFIRLDGSTKVEQRQKIVTKFNNDKSIFIFISSTRSGSIGINLTAANVVIFYDTDWNPS 1868
Query: 1097 MDQQAQDRCHRIGQTREVHIYRLISESTIEENILKKANQKRALDDLVIQSGGYN 1150
+D+QA DRCHRIGQT++VH++R + E T+EENI KK QKR LD++ I G +N
Sbjct: 1869 IDKQAMDRCHRIGQTKDVHVFRFVCEYTVEENIWKKQLQKRKLDNICINMGNFN 1922
Score = 63 (27.2 bits), Expect = 4.0e-142, Sum P(5) = 4.0e-142
Identities = 30/118 (25%), Positives = 51/118 (43%)
Query: 25 NISKDVKKFWMKIEKLVLY--KHQMEVDVRKKKALDKQLEFLLGQTERYSSMLAENLVD- 81
NIS + FW KIEKLV K +++ + KKK + + +F+ ++ N +
Sbjct: 139 NISSYMDVFWKKIEKLVWEEKKRELQQTLNKKKEM-RFKKFVKEAIKKIKDARHNNAHEL 197
Query: 82 -SHKPVQQSPMREQPGIQYKEAD-ENGAEEPGVQSKEADEDDAEQHSGF-EPQLDAAD 136
+K V S + + +NG +E KE D D E+ + Q+ + D
Sbjct: 198 FENKYVSMSSNNNSEIVNNNASSVDNGDKE----LKEDDLTDQEEEDYLLDEQMSSTD 251
Score = 62 (26.9 bits), Expect = 4.0e-142, Sum P(5) = 4.0e-142
Identities = 29/113 (25%), Positives = 48/113 (42%)
Query: 180 DIPLQELLKRYAVDKVGRESSAEM-GEDEA-EPTVVEEGHVQGNGNDLLAGSKLDTSGSL 237
++P++ELLKR K G + M ED+A E V+E H ND +G ++ G
Sbjct: 268 NLPIEELLKRMYGFKSGEDYINFMENEDDANEENVIETSH-----NDEKSGD--NSIGED 320
Query: 238 VRRCDEINGGLSISENHLLDIETSQVRDTSKKSGASTQKQALYDFSDEQEDGD 290
DE G +I E+ + E S + + K + ++ + D
Sbjct: 321 DNNNDEKGGDNNIDEDDNNNDEKSGDNSIGEDDNNNDHKSGDNNIDEDDNNND 373
Score = 61 (26.5 bits), Expect = 5.1e-142, Sum P(5) = 5.1e-142
Identities = 12/26 (46%), Positives = 18/26 (69%)
Query: 315 DSNNYIDEIALLQKESEIPVEELLAR 340
+S N +EI +L E+ +P+EELL R
Sbjct: 252 ESENKEEEINMLDDEANLPIEELLKR 277
Score = 59 (25.8 bits), Expect = 4.0e-142, Sum P(5) = 4.0e-142
Identities = 25/83 (30%), Positives = 39/83 (46%)
Query: 1149 YNTEFFKKLDPM-ELFSGHRTLPMKT-MQKEKAINNGNE-VSLSNADVEAALKCVEDEAD 1205
+N ++F +D + E+F + M K++ ++ E N E L+ VED+ D
Sbjct: 1937 HNKDWFTNVDTIKEVFINKKNNDDDDDMYKDRLLHEQVENKDKMNVRFEKTLEHVEDKDD 1996
Query: 1206 YMAL---KRAEQEEAVDN-QEFT 1224
AL K+ Q E N QEFT
Sbjct: 1997 IRALNETKKETQNEISQNMQEFT 2019
Score = 45 (20.9 bits), Expect = 5.1e-93, Sum P(5) = 5.1e-93
Identities = 8/16 (50%), Positives = 11/16 (68%)
Query: 1151 TEFFKKLDPMELFSGH 1166
T+F K LD +E+F H
Sbjct: 1791 TQFIKMLDILEIFLNH 1806
Score = 44 (20.5 bits), Expect = 1.7e-138, Sum P(4) = 1.7e-138
Identities = 20/83 (24%), Positives = 41/83 (49%)
Query: 48 EVDVRKKKALDKQLEFLLGQTERYSSMLAENLVDSHKP--VQQSPMREQPGIQ-YKEADE 104
E ++ ++ L + F G E Y + + EN D+++ ++ S E+ G E D
Sbjct: 266 EANLPIEELLKRMYGFKSG--EDYINFM-ENEDDANEENVIETSHNDEKSGDNSIGEDDN 322
Query: 105 NGAEEPGVQSKEADEDDAEQHSG 127
N E+ G + + D+++ ++ SG
Sbjct: 323 NNDEKGGDNNIDEDDNNNDEKSG 345
Score = 41 (19.5 bits), Expect = 3.5e-138, Sum P(4) = 3.5e-138
Identities = 9/44 (20%), Positives = 19/44 (43%)
Query: 93 EQPGIQYKEADENGAEEPGVQSKEADEDDAEQHSGFEPQLDAAD 136
E+ G + D+N +E + ++D+ H + +D D
Sbjct: 326 EKGGDNNIDEDDNNNDEKSGDNSIGEDDNNNDHKSGDNNIDEDD 369
Score = 40 (19.1 bits), Expect = 4.5e-138, Sum P(4) = 4.5e-138
Identities = 8/34 (23%), Positives = 15/34 (44%)
Query: 103 DENGAEEPGVQSKEADEDDAEQHSGFEPQLDAAD 136
D+N +E G + + D+ H + +D D
Sbjct: 384 DDNNNDEKGGDNNIDENDNNSDHKSEDNNIDEND 417
Score = 40 (19.1 bits), Expect = 3.4e-93, Sum P(4) = 3.4e-93
Identities = 31/145 (21%), Positives = 56/145 (38%)
Query: 1654 PDNSINEKTSNVGSGKALLKVTEDNVRTLLNVAAEQEDNELLLQKH--FTALLSSVWRMK 1711
P++ IN +N SG K +E + + + DN + H LLS K
Sbjct: 1085 PNDPINNMNNNP-SG--FTKTSEQ----FGQIVSHERDNNYHMMDHNNMNNLLS-----K 1132
Query: 1712 SRMGCRQNFSSSRNGLYLGG-SFFSSVTQTSCKSTRE-PARRV---KFTNL---GQSSKL 1763
+ +N +S N Y + ++ +QTS ++ ++ F N+ G K
Sbjct: 1133 EMVNSLRNDDNSNNNFYKYSLTSNNNDSQTSIHDNKQCDYNKLCADTFNNINSIGNEEKR 1192
Query: 1764 LSAALHDANSRQQDDKVSNFDRRED 1788
L++ N+ D +N D +
Sbjct: 1193 SLNVLNEQNNNNSKDNNNNIDNNNN 1217
Score = 39 (18.8 bits), Expect = 5.7e-138, Sum P(4) = 5.7e-138
Identities = 13/48 (27%), Positives = 24/48 (50%)
Query: 44 KHQMEVDVRKKKALDKQLEFLL--GQTERYSSMLAENLV-DSHKPVQQ 88
+H+ E D K+ ++K+ E +L E S +E++ DS Q+
Sbjct: 503 EHEYESDNYDKEKINKKKELILLKNDIENDSDETSEHIKRDSRSSCQK 550
Score = 38 (18.4 bits), Expect = 5.1e-93, Sum P(5) = 5.1e-93
Identities = 6/11 (54%), Positives = 9/11 (81%)
Query: 1325 WDPIIDKTAVE 1335
W+P IDK A++
Sbjct: 1865 WNPSIDKQAMD 1875
Score = 38 (18.4 bits), Expect = 5.6e-93, Sum P(4) = 5.6e-93
Identities = 8/23 (34%), Positives = 13/23 (56%)
Query: 1642 FRELIQRYILSVPDNSINEKTSN 1664
++E I + ILS D + E +N
Sbjct: 1379 YKEYIPKNILSFSDEFLTELNNN 1401
>UNIPROTKB|E1C186 [details] [associations]
symbol:Gga.53842 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0016607
"nuclear speck" evidence=IEA] InterPro:IPR000330 InterPro:IPR001005
InterPro:IPR001650 Pfam:PF00176 PROSITE:PS51194 SMART:SM00717
GO:GO:0005524 GO:GO:0003677 GO:GO:0016607 GO:GO:0003682
GO:GO:0035267 GO:GO:0043968 GO:GO:0043967 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR017877
PROSITE:PS50090 InterPro:IPR013999 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 SMART:SM00573 PROSITE:PS51204
GeneTree:ENSGT00530000063427 OMA:MQKQKLQ EMBL:AADN02034826
IPI:IPI00587546 Ensembl:ENSGALT00000003682 ArrayExpress:E1C186
Uniprot:E1C186
Length = 3118
Score = 857 (306.7 bits), Expect = 1.1e-132, Sum P(5) = 1.1e-132
Identities = 187/497 (37%), Positives = 261/497 (52%)
Query: 318 NYIDEIALLQKESEIPVEELLARYRKDMKINKIXXXXXXXXXXXXXXXXXXPAHEDGELK 377
N+ E++ L KE+E+P+++LL Y + ED +
Sbjct: 966 NHQTELSNLVKEAELPLDDLLKMYE------------GAFSESFHWPQPKPDSEEDSSEE 1013
Query: 378 LENDFMDGNVDPGASQLVMLPLTXXXXXXXXXXXXXXXXXXNRIXXXXXXXXXXQPTGIT 437
+D M P +++ L I P G +
Sbjct: 1014 EMDDHMSDRESPQKEVVLIDSLLSIDQYKSIDRSSPPKKHMRDISEVAAAAEVLLPKGSS 1073
Query: 438 FSTTQVRTKFPFLLKFPLREYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTIAMLAHL 497
TT V+ P LL PLREYQ IGLDWL +Y K LNGILADE GLGKT+ IA AHL
Sbjct: 1074 RITTAVKYNTPSLLYGPLREYQKIGLDWLAKLYRKNLNGILADEAGLGKTVQIIAFFAHL 1133
Query: 498 ACEKGIWGPHLIVVPTSVMLNWETEFLKWCPAFKILTYFGSAKERKFKRQGWLKPNSFHV 557
AC +G WGPHL+VV + +L WE E +WCP KIL YFGS +E + KRQ W +PNSF+V
Sbjct: 1134 ACNEGNWGPHLVVVRSCNILKWELELKRWCPGLKILLYFGSQRELRAKRQEWSEPNSFNV 1193
Query: 558 CITTYRLIIQDSKVFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPLQN 617
CIT+Y+ + + F + +WKYLI+DE IKN + W+ L + S+ R+LL TPL N
Sbjct: 1194 CITSYKQLFKGHPAFMKMRWKYLIVDEMQQIKNMTEKHWEALFSLRSQHRLLLIDTPLHN 1253
Query: 618 DLMELWSLMHFLMPHIFQSHQEFKDWFCNPISGMVEGQEKVNKEVVDRLHNVLRPFILRR 677
LMELW+++HFL+P I + + +F P+ E + ++V RLH +++PFILRR
Sbjct: 1254 TLMELWTMVHFLIPGISRPYLDF------PVKAPNEENQDYCHKLVIRLHRMIQPFILRR 1307
Query: 678 LKRDVEKQLPMKQEHVIYCRLSKRQRNLYEDFIASSETQATLASANFFGMISVIMQLRKV 737
KRDVEKQL K EHV+ CRLS RQ+ +YED I TQ L S +F ++ V+MQL+++
Sbjct: 1308 SKRDVEKQLTKKYEHVLKCRLSSRQKAMYEDVILQPGTQEALKSGHFISVLHVLMQLQRI 1367
Query: 738 CNHPDLFEGRPIVSSFDMSGIDXXXXXXXXXXXXXXXXXTADLKGLGLLFTNLDFSMNSW 797
CNHPDL R +S+ ++ +DL L+ ++ M +
Sbjct: 1368 CNHPDLINPRLSSTSYVSETLEYRTASLVLSALERDIWKESDLSLFDLI--GMENKMTHY 1425
Query: 798 ESDELNAIATPASLIKE 814
E+ L LI+E
Sbjct: 1426 EAQMLPKQKVTRKLIEE 1442
Score = 491 (177.9 bits), Expect = 1.1e-132, Sum P(5) = 1.1e-132
Identities = 137/411 (33%), Positives = 211/411 (51%)
Query: 856 QDRASSVAWWNSLRCQKKPVYSTSLRE--LLTVKHPVCDILQQKTVRRSYLYSSKLADIV 913
++R + N RC + PVY + L LLT + + + R + + L+
Sbjct: 1748 KERLDRIFSGNERRCSRAPVYGSDLLSICLLTGERRPSQV-SDSSWRWAGFVNCCLSSAS 1806
Query: 914 LSPVERFQRMIG-----------LVESFMFAIPAARAPAPVCWCSKSGASVFLQ-PTYKE 961
SP + + MI +V+ +F +PAA A P + + S + +K
Sbjct: 1807 GSPSDPLREMIQTLFREQESLKEVVDRALFVLPAAVAAPPCLYVANPPPSYSHRLKVFKH 1866
Query: 962 KCSEVLSPLLFPIRPAIVRRQVYFPDRRLIQFDCGKLQELAILLRKLKSDGHRALIFTQM 1021
+ +P L +R + + FPD RL+Q+D GKL+ LA+LL KLKS+G R LI +QM
Sbjct: 1867 SLKQKAAPHLHQLRRITTPQLLQFPDLRLVQYDSGKLEALAVLLLKLKSEGRRVLILSQM 1926
Query: 1022 TKMLDILEEFISLYGYTYMRLDGSTQPEERQTLMQRFNTNPKIFLFILSTRSGGVGINLV 1081
MLDILE F++ + T++R+D E+RQ LM+ FN + +IF ILS+ S G+NLV
Sbjct: 1927 ILMLDILELFLNFHFLTFVRIDEYANHEQRQELMKSFNRDKRIFCAILSSHSRSTGVNLV 1986
Query: 1082 GADTVIFYDSDWNPAMDQQAQDRCHRIGQTREVHIYRLISESTIEENILKKANQKRALDD 1141
ADTV+FYD+D NP MD +AQ+ C RIG+ +++HIYRL+S +++EE +LK K + +
Sbjct: 1987 EADTVVFYDNDLNPVMDAKAQEWCDRIGRCKDIHIYRLVSGNSVEEKLLKNGT-KDLIRE 2045
Query: 1142 LVIQSGGYNTEFFKKLDPMELFSGHRTLPMKTMQKEKAINNGNEVSLSNADVEAALKCVE 1201
+ Q Y+ F + ELF H PM+ + V LS A +
Sbjct: 2046 VAAQGNDYSMAFLTQQTIQELFEVHS--PME--DSGFRVKAEEFVVLSQEPSPAETISPK 2101
Query: 1202 DEADYM-ALKRAEQE-EAVDN--QEFTEEAVGRPEDDELVIEDTVRTDEPT 1248
++ AL EQE E +D+ QE E+ P EL ++ +EP+
Sbjct: 2102 VARPFIEALNSIEQEDEELDDRVQEIRPESSIEPLVSELC--ESKYNEEPS 2150
Score = 83 (34.3 bits), Expect = 1.1e-132, Sum P(5) = 1.1e-132
Identities = 25/116 (21%), Positives = 57/116 (49%)
Query: 22 VAVNISKDVKKFWMKIEKLVLYKHQMEVDVRKKKALDKQLEFLLGQTERYSSMLAENLVD 81
+A +I+++++ FW IE++V K Q+E ++KKAL+ + G+ + S E+L
Sbjct: 867 IAASIAREIEYFWSNIEQVVEIKLQIEFQEKRKKALNLKKISRKGKDAKPS----EDLF- 921
Query: 82 SHKPVQQSPMREQPGIQYKEADENGAEEPGVQSKEADEDDAEQHSGFEPQLDAADI 137
P+++ M + ++A + +E +E E+ + Q + +++
Sbjct: 922 ---PIKEGEMGSSSSGRKRKASTSLTDEEVEDEEETIEEQEAKEGNINHQTELSNL 974
Score = 79 (32.9 bits), Expect = 1.1e-132, Sum P(5) = 1.1e-132
Identities = 16/49 (32%), Positives = 30/49 (61%)
Query: 1309 NQLRPIDRYAIRFLELWDPIIDKTAV---ESEVKFEEREWELDRIEKYK 1354
+QL PI++YA+ +LEL+ +D+ E E+K ++ WE+ + + K
Sbjct: 2160 DQLTPIEKYALNYLELFHVSVDENEPRLNEVELKTAKKVWEVQHLRELK 2208
Score = 60 (26.2 bits), Expect = 1.1e-132, Sum P(5) = 1.1e-132
Identities = 15/46 (32%), Positives = 21/46 (45%)
Query: 1601 LCAVVHEYGPNWSLVSDILYGMTASGYYRGRYRHPVHCCERFRELI 1646
L V + PNW LVSD++ + YR P C R+ +I
Sbjct: 2392 LAVVSPAHTPNWDLVSDVVNSCSRV------YRSPKQCRNRYENVI 2431
Score = 37 (18.1 bits), Expect = 7.0e-128, Sum P(5) = 7.0e-128
Identities = 8/14 (57%), Positives = 9/14 (64%)
Query: 217 HVQGNGNDLLAGSK 230
H+QGN D LA K
Sbjct: 396 HLQGNMMDFLAFKK 409
Score = 37 (18.1 bits), Expect = 7.0e-128, Sum P(5) = 7.0e-128
Identities = 8/19 (42%), Positives = 9/19 (47%)
Query: 77 ENLVDSHKPVQQSPMREQP 95
+N H P Q P R QP
Sbjct: 578 QNAASLHTPPPQLPGRLQP 596
>UNIPROTKB|E1C188 [details] [associations]
symbol:Gga.53842 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00717
GO:GO:0005524 GO:GO:0003677 GO:GO:0003682 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR017877
PROSITE:PS50090 InterPro:IPR013999 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 SMART:SM00573 PROSITE:PS51204
GeneTree:ENSGT00530000063427 EMBL:AADN02034826 IPI:IPI00592312
Ensembl:ENSGALT00000003680 ArrayExpress:E1C188 Uniprot:E1C188
Length = 3044
Score = 857 (306.7 bits), Expect = 1.1e-132, Sum P(5) = 1.1e-132
Identities = 187/497 (37%), Positives = 261/497 (52%)
Query: 318 NYIDEIALLQKESEIPVEELLARYRKDMKINKIXXXXXXXXXXXXXXXXXXPAHEDGELK 377
N+ E++ L KE+E+P+++LL Y + ED +
Sbjct: 966 NHQTELSNLVKEAELPLDDLLKMYE------------GAFSESFHWPQPKPDSEEDSSEE 1013
Query: 378 LENDFMDGNVDPGASQLVMLPLTXXXXXXXXXXXXXXXXXXNRIXXXXXXXXXXQPTGIT 437
+D M P +++ L I P G +
Sbjct: 1014 EMDDHMSDRESPQKEVVLIDSLLSIDQYKSIDRSSPPKKHMRDISEVAAAAEVLLPKGSS 1073
Query: 438 FSTTQVRTKFPFLLKFPLREYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTIAMLAHL 497
TT V+ P LL PLREYQ IGLDWL +Y K LNGILADE GLGKT+ IA AHL
Sbjct: 1074 RITTAVKYNTPSLLYGPLREYQKIGLDWLAKLYRKNLNGILADEAGLGKTVQIIAFFAHL 1133
Query: 498 ACEKGIWGPHLIVVPTSVMLNWETEFLKWCPAFKILTYFGSAKERKFKRQGWLKPNSFHV 557
AC +G WGPHL+VV + +L WE E +WCP KIL YFGS +E + KRQ W +PNSF+V
Sbjct: 1134 ACNEGNWGPHLVVVRSCNILKWELELKRWCPGLKILLYFGSQRELRAKRQEWSEPNSFNV 1193
Query: 558 CITTYRLIIQDSKVFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPLQN 617
CIT+Y+ + + F + +WKYLI+DE IKN + W+ L + S+ R+LL TPL N
Sbjct: 1194 CITSYKQLFKGHPAFMKMRWKYLIVDEMQQIKNMTEKHWEALFSLRSQHRLLLIDTPLHN 1253
Query: 618 DLMELWSLMHFLMPHIFQSHQEFKDWFCNPISGMVEGQEKVNKEVVDRLHNVLRPFILRR 677
LMELW+++HFL+P I + + +F P+ E + ++V RLH +++PFILRR
Sbjct: 1254 TLMELWTMVHFLIPGISRPYLDF------PVKAPNEENQDYCHKLVIRLHRMIQPFILRR 1307
Query: 678 LKRDVEKQLPMKQEHVIYCRLSKRQRNLYEDFIASSETQATLASANFFGMISVIMQLRKV 737
KRDVEKQL K EHV+ CRLS RQ+ +YED I TQ L S +F ++ V+MQL+++
Sbjct: 1308 SKRDVEKQLTKKYEHVLKCRLSSRQKAMYEDVILQPGTQEALKSGHFISVLHVLMQLQRI 1367
Query: 738 CNHPDLFEGRPIVSSFDMSGIDXXXXXXXXXXXXXXXXXTADLKGLGLLFTNLDFSMNSW 797
CNHPDL R +S+ ++ +DL L+ ++ M +
Sbjct: 1368 CNHPDLINPRLSSTSYVSETLEYRTASLVLSALERDIWKESDLSLFDLI--GMENKMTHY 1425
Query: 798 ESDELNAIATPASLIKE 814
E+ L LI+E
Sbjct: 1426 EAQMLPKQKVTRKLIEE 1442
Score = 491 (177.9 bits), Expect = 1.1e-132, Sum P(5) = 1.1e-132
Identities = 137/411 (33%), Positives = 211/411 (51%)
Query: 856 QDRASSVAWWNSLRCQKKPVYSTSLRE--LLTVKHPVCDILQQKTVRRSYLYSSKLADIV 913
++R + N RC + PVY + L LLT + + + R + + L+
Sbjct: 1669 KERLDRIFSGNERRCSRAPVYGSDLLSICLLTGERRPSQV-SDSSWRWAGFVNCCLSSAS 1727
Query: 914 LSPVERFQRMIG-----------LVESFMFAIPAARAPAPVCWCSKSGASVFLQ-PTYKE 961
SP + + MI +V+ +F +PAA A P + + S + +K
Sbjct: 1728 GSPSDPLREMIQTLFREQESLKEVVDRALFVLPAAVAAPPCLYVANPPPSYSHRLKVFKH 1787
Query: 962 KCSEVLSPLLFPIRPAIVRRQVYFPDRRLIQFDCGKLQELAILLRKLKSDGHRALIFTQM 1021
+ +P L +R + + FPD RL+Q+D GKL+ LA+LL KLKS+G R LI +QM
Sbjct: 1788 SLKQKAAPHLHQLRRITTPQLLQFPDLRLVQYDSGKLEALAVLLLKLKSEGRRVLILSQM 1847
Query: 1022 TKMLDILEEFISLYGYTYMRLDGSTQPEERQTLMQRFNTNPKIFLFILSTRSGGVGINLV 1081
MLDILE F++ + T++R+D E+RQ LM+ FN + +IF ILS+ S G+NLV
Sbjct: 1848 ILMLDILELFLNFHFLTFVRIDEYANHEQRQELMKSFNRDKRIFCAILSSHSRSTGVNLV 1907
Query: 1082 GADTVIFYDSDWNPAMDQQAQDRCHRIGQTREVHIYRLISESTIEENILKKANQKRALDD 1141
ADTV+FYD+D NP MD +AQ+ C RIG+ +++HIYRL+S +++EE +LK K + +
Sbjct: 1908 EADTVVFYDNDLNPVMDAKAQEWCDRIGRCKDIHIYRLVSGNSVEEKLLKNGT-KDLIRE 1966
Query: 1142 LVIQSGGYNTEFFKKLDPMELFSGHRTLPMKTMQKEKAINNGNEVSLSNADVEAALKCVE 1201
+ Q Y+ F + ELF H PM+ + V LS A +
Sbjct: 1967 VAAQGNDYSMAFLTQQTIQELFEVHS--PME--DSGFRVKAEEFVVLSQEPSPAETISPK 2022
Query: 1202 DEADYM-ALKRAEQE-EAVDN--QEFTEEAVGRPEDDELVIEDTVRTDEPT 1248
++ AL EQE E +D+ QE E+ P EL ++ +EP+
Sbjct: 2023 VARPFIEALNSIEQEDEELDDRVQEIRPESSIEPLVSELC--ESKYNEEPS 2071
Score = 82 (33.9 bits), Expect = 1.1e-132, Sum P(5) = 1.1e-132
Identities = 24/117 (20%), Positives = 53/117 (45%)
Query: 22 VAVNISKDVKKFWMKIEKLVLYKHQMEVDVRKKKALDKQLEFLLGQTERY-SSMLAENLV 80
+A +I+++++ FW IE++V K Q+E ++KKAL+ + G + +
Sbjct: 864 IAASIAREIEYFWSNIEQVVEIKLQIEFQEKRKKALNLKKISRKGNCVSFCKKFITSRPT 923
Query: 81 DSHKPVQQSPMREQPGIQYKEADENGAEEPGVQSKEADEDDAEQHSGFEPQLDAADI 137
+ +S R++ +E EE ++ +EA E + + + A++
Sbjct: 924 SLSADIGRSSGRKRKASTSLTDEEVEDEEETIEEQEAKEGNINHQTELSNLVKEAEL 980
Score = 79 (32.9 bits), Expect = 1.1e-132, Sum P(5) = 1.1e-132
Identities = 16/49 (32%), Positives = 30/49 (61%)
Query: 1309 NQLRPIDRYAIRFLELWDPIIDKTAV---ESEVKFEEREWELDRIEKYK 1354
+QL PI++YA+ +LEL+ +D+ E E+K ++ WE+ + + K
Sbjct: 2081 DQLTPIEKYALNYLELFHVSVDENEPRLNEVELKTAKKVWEVQHLRELK 2129
Score = 60 (26.2 bits), Expect = 1.1e-132, Sum P(5) = 1.1e-132
Identities = 15/46 (32%), Positives = 21/46 (45%)
Query: 1601 LCAVVHEYGPNWSLVSDILYGMTASGYYRGRYRHPVHCCERFRELI 1646
L V + PNW LVSD++ + YR P C R+ +I
Sbjct: 2313 LAVVSPAHTPNWDLVSDVVNSCSRV------YRSPKQCRNRYENVI 2352
Score = 37 (18.1 bits), Expect = 5.8e-128, Sum P(5) = 5.8e-128
Identities = 8/14 (57%), Positives = 9/14 (64%)
Query: 217 HVQGNGNDLLAGSK 230
H+QGN D LA K
Sbjct: 396 HLQGNMMDFLAFKK 409
Score = 37 (18.1 bits), Expect = 5.8e-128, Sum P(5) = 5.8e-128
Identities = 8/19 (42%), Positives = 9/19 (47%)
Query: 77 ENLVDSHKPVQQSPMREQP 95
+N H P Q P R QP
Sbjct: 575 QNAASLHTPPPQLPGRLQP 593
>ZFIN|ZDB-GENE-081104-186 [details] [associations]
symbol:si:ch211-227i14.2 "si:ch211-227i14.2"
species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
Pfam:PF00176 PROSITE:PS51194 SMART:SM00717 ZFIN:ZDB-GENE-081104-186
GO:GO:0005524 GO:GO:0003677 GO:GO:0003682 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR017877
PROSITE:PS50090 InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529
PROSITE:PS51204 GeneTree:ENSGT00530000063427 EMBL:AL929056
EMBL:CABZ01053382 EMBL:CABZ01053383 IPI:IPI00890401
Ensembl:ENSDART00000111655 Bgee:F1Q5V1 Uniprot:F1Q5V1
Length = 3108
Score = 914 (326.8 bits), Expect = 2.7e-129, Sum P(7) = 2.7e-129
Identities = 174/384 (45%), Positives = 246/384 (64%)
Query: 433 PTGITFSTTQVRTKFPFLLKFPLREYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTIA 492
P G +T R+ P LL LREYQ +G++WL +++ K LNGILADE GLGKT+ T+A
Sbjct: 1039 PKGSARTTLTSRSSPPSLLHGSLREYQQVGVEWLASLHRKNLNGILADETGLGKTVQTVA 1098
Query: 493 MLAHLACEKGIWGPHLIVVPTSVMLNWETEFLKWCPAFKILTYFGSAKERKFKRQGWLKP 552
AHLAC +GIWGPHL+VV T +LNWE EF +WCP KIL Y GS ++R++KR W +P
Sbjct: 1099 YFAHLACNQGIWGPHLVVVRTCKLLNWEMEFKRWCPGLKILLYLGSRRQRRYKRSRWCEP 1158
Query: 553 NSFHVCITTYRLIIQDSKVFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTG 612
N+FHVC+T+Y+L+++D F R++WK+L+LDE LIKN + W+T+ N S++RILL
Sbjct: 1159 NNFHVCVTSYKLLLKDQSHFLRRRWKHLVLDEVQLIKNMTEKHWETIFNIKSQQRILLIN 1218
Query: 613 TPLQNDLMELWSLMHFLMPHIFQSHQEFKDWFCNPIS-GMVEGQEKVNKEVVDRLHNVLR 671
TPLQN L ELW+++HFL+P I + F PI G + Q+ +K V+ RLH +++
Sbjct: 1219 TPLQNTLKELWTMIHFLLPGITHPYLNF------PIKPGTDQNQDYCHKLVI-RLHRMIQ 1271
Query: 672 PFILRRLKRDVEKQLPMKQEHVIYCRLSKRQRNLYEDFIASSETQATLASANFFGMISVI 731
PFILRR KRDVEKQ+P K EH++ CRLSKRQ+++YED + Q L + +F ++ V+
Sbjct: 1272 PFILRRSKRDVEKQMPKKYEHILKCRLSKRQKSMYEDILIQPSAQEALKTGHFVRVLEVL 1331
Query: 732 MQLRKVCNHPDLFEGRPIVSSFDMSGIDXXXXXXXXXXXXXXXXXTADLKGLGLLFTNLD 791
MQL+K+CNHPDL + R +S+ + T DL L+ N +
Sbjct: 1332 MQLQKICNHPDLIQPRDTHNSYVCQPLQYNTPSLLLNALQQDQWKTVDLSLFDLI--NNE 1389
Query: 792 FSMNSWESDE-LNAIATPASLIKE 814
+ +E++E L I LI+E
Sbjct: 1390 GKLTRYEAEEALPKIRMTKQLIEE 1413
Score = 427 (155.4 bits), Expect = 2.7e-129, Sum P(7) = 2.7e-129
Identities = 108/328 (32%), Positives = 173/328 (52%)
Query: 930 FMFAIPAARAPAPVCW-CSKSGASVFLQPTYKEKCSEVLSPLLFPIRPAIVRRQVYFPDR 988
F + +PAA AP P + C+ + Q +++ + E +P IR FPD
Sbjct: 1801 FSWILPAAVAPPPQLYACNPPPSYSLAQKSFRRQLQEASAPFNAEIRKLACPPVASFPDA 1860
Query: 989 RLIQFD-CGKLQELAILLRKLKSDGHRALIFTQMTKMLDILEEFISLYGYTYMRLDGSTQ 1047
+++ D GKL+ L+ILL+KL ++ R LIFTQM MLDILE F+ TY+RLD S
Sbjct: 1861 HMLEMDSAGKLEALSILLQKLSAENRRVLIFTQMASMLDILESFLDHRHLTYVRLDESLS 1920
Query: 1048 PEERQTLMQRFNTNPKIFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQDRCHR 1107
EERQ ++++N N +IF IL+ R ++ ADT++FYD+D NP+MD + Q+ C +
Sbjct: 1921 LEERQEQVKKYNRNRQIFCTILTNRCCSAMGHVFDADTIVFYDTDLNPSMDMRTQEWCDK 1980
Query: 1108 IGQTREVHIYRLISESTIEENILKKANQKRALDDLVIQSGGYNTEFFKKLDPMELF---- 1163
IG+++++HIYRL S ++IEE +LK K + ++ Q Y F + +LF
Sbjct: 1981 IGRSKDIHIYRLESGNSIEEKLLKNGT-KDLIREVAAQGMDYTLAFLTQRTIQDLFEVEA 2039
Query: 1164 -SGHRTLPMKTMQKEKAINNGNEVSLSNADVEAALKCVEDEADYMALKRAEQEEAVDNQE 1222
SG + + +E + + ++ ++A L + E Y + Q E ++ +
Sbjct: 2040 GSGEKVEEFVVLHQEPSPSESIPPHVARPYIQA-LNTIRQETQYE--EEEGQVEVDEDVK 2096
Query: 1223 FTEEAVGRPEDDELVIEDTVRTDEPTDQ 1250
+E G P E+ IE+ R E T Q
Sbjct: 2097 SDKEKAGGPV--EMDIEEGAR--EETSQ 2120
Score = 85 (35.0 bits), Expect = 2.7e-129, Sum P(7) = 2.7e-129
Identities = 19/66 (28%), Positives = 34/66 (51%)
Query: 1289 DVKQMXXXXXXXGEAISSFENQLRPIDRYAIRFLELWDPIIDKTAVESEVKFEEREWELD 1348
D+++ E +++ QL PI+RYA+ +LE D+ V+ ++ +R WEL
Sbjct: 2109 DIEEGAREETSQLEELAAVMEQLTPIERYALHYLEYLHISEDEQVVKERMETTKRGWELQ 2168
Query: 1349 RIEKYK 1354
+K K
Sbjct: 2169 LQQKLK 2174
Score = 68 (29.0 bits), Expect = 2.7e-129, Sum P(7) = 2.7e-129
Identities = 27/105 (25%), Positives = 47/105 (44%)
Query: 22 VAVNISKDVKKFWMKIEKLVLYKHQMEV--DVRKKKALDKQLEFLLGQTERYSSMLAENL 79
+A I++ V FW IE++V KH E+ ++ +KA K G+++ S +
Sbjct: 842 IASTIARGVDYFWSNIEQIVEIKHHFEIYDNLCLQKASSK------GESQCAKSGQSS-- 893
Query: 80 VDSHKPVQQSPMREQPGIQYKEADENGAEEPGVQSKEADEDDAEQ 124
D + P R++ E EE ++ +EA E A+Q
Sbjct: 894 -DKESKRETGPSRKRKSSTSLSDVEVEDEESTIEEQEATEAAADQ 937
Score = 63 (27.2 bits), Expect = 5.5e-129, Sum P(7) = 5.5e-129
Identities = 32/153 (20%), Positives = 62/153 (40%)
Query: 189 RYAVDKVGRESSAEMGEDEAEPTVVEEGHVQGNGNDLLAGSKLDTSGSLVRRCDEINGGL 248
RY V+K +MGE E + + H+ + + G +D S + + EI
Sbjct: 819 RYHVEK------KKMGEREKKEEEMRLRHI---ASTIARG--VDYFWSNIEQIVEIKHHF 867
Query: 249 SISENHLLDIETSQVRDTSKKSGASTQKQALYDFSDEQEDGDFVVATGXXXXXXXXXXXX 308
I +N L +S+ KSG S+ K++ + ++ +
Sbjct: 868 EIYDNLCLQKASSKGESQCAKSGQSSDKESKRETGPSRKRKSSTSLSDVEVEDEESTIEE 927
Query: 309 XXXXXXDSNNYIDEIALLQKESEIPVEELLARY 341
++ E+A L KE+E+P+++L+ +Y
Sbjct: 928 QEATEAAADQKA-ELAELTKEAEVPLDDLVKQY 959
Score = 56 (24.8 bits), Expect = 2.7e-129, Sum P(7) = 2.7e-129
Identities = 15/46 (32%), Positives = 21/46 (45%)
Query: 1601 LCAVVHEYGPNWSLVSDILYGMTASGYYRGRYRHPVHCCERFRELI 1646
L V + PNW LVSD++ + YR P C R+ +I
Sbjct: 2356 LTIVSPAHTPNWDLVSDVVNSCSRI------YRSPKQCRYRYENVI 2395
Score = 44 (20.5 bits), Expect = 2.2e-127, Sum P(6) = 2.2e-127
Identities = 11/28 (39%), Positives = 16/28 (57%)
Query: 98 QYKEADENGAE--EPGVQSKEADEDDAE 123
QY A G E +P QS++ D ++AE
Sbjct: 958 QYAGAYAEGFEWPQPSSQSEDEDREEAE 985
Score = 42 (19.8 bits), Expect = 5.5e-129, Sum P(7) = 5.5e-129
Identities = 15/48 (31%), Positives = 20/48 (41%)
Query: 78 NLVDSHKPVQQSPMREQPGIQYKEADENGAEEPGVQSKEADED-DAEQ 124
N S PV QS + G + G G S+E+ +D AEQ
Sbjct: 700 NTGPSLSPVAQSKLTATNGTVGLKLSSLGQSSIGQNSQESSQDKQAEQ 747
Score = 41 (19.5 bits), Expect = 3.0e-36, Sum P(7) = 3.0e-36
Identities = 13/38 (34%), Positives = 19/38 (50%)
Query: 802 LNAIATPASLIKERADLNNLEEVGP---FCTHRKRLNG 836
L + ++P SL+ L ++VG HRK LNG
Sbjct: 1047 LTSRSSPPSLL--HGSLREYQQVGVEWLASLHRKNLNG 1082
Score = 40 (19.1 bits), Expect = 2.7e-129, Sum P(7) = 2.7e-129
Identities = 6/12 (50%), Positives = 11/12 (91%)
Query: 180 DIPLQELLKRYA 191
++PL +L+K+YA
Sbjct: 949 EVPLDDLVKQYA 960
Score = 39 (18.8 bits), Expect = 7.9e-84, Sum P(5) = 7.9e-84
Identities = 8/11 (72%), Positives = 9/11 (81%)
Query: 933 AIPAARAPAPV 943
A+PAA APA V
Sbjct: 2625 AVPAAAAPAEV 2635
Score = 37 (18.1 bits), Expect = 2.7e-129, Sum P(7) = 2.7e-129
Identities = 7/33 (21%), Positives = 19/33 (57%)
Query: 1895 VKCPKSKLRKTSMEHSEIQHSSPEPVSNQSVAT 1927
+K K ++ ++ + ++ H++P +N +AT
Sbjct: 2765 LKQKKLQMAPSTQQPQQV-HATPAATANPQIAT 2796
>MGI|MGI:1276124 [details] [associations]
symbol:Ep400 "E1A binding protein p400" species:10090 "Mus
musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0016607
"nuclear speck" evidence=IDA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0035267 "NuA4 histone acetyltransferase complex"
evidence=ISO] [GO:0043967 "histone H4 acetylation" evidence=ISO]
[GO:0043968 "histone H2A acetylation" evidence=ISO]
InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
SMART:SM00717 MGI:MGI:1276124 GO:GO:0005524 GO:GO:0003677
GO:GO:0016607 GO:GO:0003682 GO:GO:0035267 GO:GO:0043968
GO:GO:0043967 GO:GO:0004386 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR017877 PROSITE:PS50090
InterPro:IPR013999 InterPro:IPR014012 InterPro:IPR006562
Pfam:PF07529 SMART:SM00573 PROSITE:PS51204
GeneTree:ENSGT00530000063427 KO:K11320 CTD:57634 HOVERGEN:HBG051488
OMA:MQKQKLQ OrthoDB:EOG4RBQHQ ChiTaRS:EP400 EMBL:AB092694
EMBL:AB092695 EMBL:AC161348 EMBL:AK006168 EMBL:AK030095
EMBL:AK037693 EMBL:AK046892 EMBL:AK163566 EMBL:AK164049
EMBL:AK122517 EMBL:BC022153 EMBL:BC085511 IPI:IPI00229659
IPI:IPI00404291 IPI:IPI00480329 IPI:IPI00720144 IPI:IPI01008391
RefSeq:NP_083613.2 RefSeq:NP_775089.1 UniGene:Mm.270487
ProteinModelPortal:Q8CHI8 IntAct:Q8CHI8 STRING:Q8CHI8
PhosphoSite:Q8CHI8 PaxDb:Q8CHI8 PRIDE:Q8CHI8
Ensembl:ENSMUST00000041558 Ensembl:ENSMUST00000112435
Ensembl:ENSMUST00000112436 GeneID:75560 KEGG:mmu:75560
UCSC:uc008yrf.1 UCSC:uc008yrg.1 UCSC:uc008yrh.1 InParanoid:Q8CHI8
Bgee:Q8CHI8 CleanEx:MM_EP400 Genevestigator:Q8CHI8
GermOnline:ENSMUSG00000029505 Uniprot:Q8CHI8
Length = 3072
Score = 796 (285.3 bits), Expect = 5.9e-127, Sum P(6) = 5.9e-127
Identities = 152/321 (47%), Positives = 201/321 (62%)
Query: 433 PTGITFSTTQVRTKFPFLLKFPLREYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTIA 492
P G TT V+ P LL LR+YQ IGLDWL +Y K LNGILADE GLGKT+ IA
Sbjct: 1068 PKGSARVTTAVKFSAPSLLYGALRDYQKIGLDWLAKLYRKNLNGILADEAGLGKTVQIIA 1127
Query: 493 MLAHLACEKGIWGPHLIVVPTSVMLNWETEFLKWCPAFKILTYFGSAKERKFKRQGWLKP 552
AHLAC +G WGPHL+V+ + +L WE E +WCP K L+Y GS +E K KRQ W +P
Sbjct: 1128 FFAHLACNEGNWGPHLVVMRSCNILKWELELKRWCPGLKTLSYVGSHRELKAKRQEWTEP 1187
Query: 553 NSFHVCITTYRLIIQDSKVFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTG 612
N+FH+CIT+Y+ + F R WK L++DE +K + W+ + S++R+LL
Sbjct: 1188 NNFHICITSYKQFFRGYTAFSRVHWKCLVVDEMQRVKGMTERHWEAIFKLQSQQRLLLID 1247
Query: 613 TPLQNDLMELWSLMHFLMPHIFQSHQEFKDWFCNPISGMVEGQEKVNKEVVDRLHNVLRP 672
PL N +ELW+++HFL+P I + + F P+ E + ++V RLH V +P
Sbjct: 1248 VPLHNTFLELWTMVHFLIPGISRPYLSF------PLKAPNEENQDYYHKMVIRLHRVTQP 1301
Query: 673 FILRRLKRDVEKQLPMKQEHVIYCRLSKRQRNLYEDFIASSETQATLASANFFGMISVIM 732
FILRR KRDVEKQL K EHV+ CRLS RQ+ LYED I TQ L S +F ++SV+
Sbjct: 1302 FILRRTKRDVEKQLTRKYEHVLKCRLSSRQKALYEDVILQPRTQEALKSGHFVSVLSVLT 1361
Query: 733 QLRKVCNHPDLFEGRPIVSSF 753
+L+++CNHP L E R SSF
Sbjct: 1362 RLQRICNHPGLVEPRVPGSSF 1382
Score = 521 (188.5 bits), Expect = 5.9e-127, Sum P(6) = 5.9e-127
Identities = 138/418 (33%), Positives = 216/418 (51%)
Query: 856 QDRASSVAWWNSLRCQKKPVYSTSLRELLTV----KHPVCDILQQ------KTVRRSYLY 905
++R + + N RC + PVY L + ++ K P+C L K V
Sbjct: 1665 KERLDQIHFINERRCSQAPVYGRDLLRICSLPGRRKRPLCWSLDSNFGKGPKGVNYDMSL 1724
Query: 906 SSKLADIVLS-PVERFQRMIGLVESFMFAIPAARAPAPVCWCSKSGASVFLQPTYKEKC- 963
S D++L+ E Q ++G V IP A P W ++ + + +C
Sbjct: 1725 SKSEGDLILTLSQESLQDVLGRVAC---VIPPVVATPPSLWVARPPSLYSSRLRALRQCL 1781
Query: 964 SEVLSPLLFPIRPAIVRRQVYFPDRRLIQFDCGKLQELAILLRKLKSDGHRALIFTQMTK 1023
E P ++ R + FP+ RL+QFD GKL+ LAILL+KLKS+G R LI +QM
Sbjct: 1782 REHTGPYHRQLQQLTALRSLQFPELRLVQFDSGKLEALAILLQKLKSEGRRVLILSQMVL 1841
Query: 1024 MLDILEEFISLYGYTYMRLDGSTQPEERQTLMQRFNTNPKIFLFILSTRSGGVGINLVGA 1083
MLDILE F++ + TY+R+D + E+RQ LM+ FN + +IF +LST S GINLV A
Sbjct: 1842 MLDILEMFLNFHYLTYVRIDENANSEQRQELMRSFNRDRRIFCALLSTHSRATGINLVEA 1901
Query: 1084 DTVIFYDSDWNPAMDQQAQDRCHRIGQTREVHIYRLISESTIEENILKKANQKRALDDLV 1143
DTV+FYD+D NP MD +AQ+ C RIG+ +++HIYRL+S ++IEE +LK K + ++
Sbjct: 1902 DTVVFYDNDLNPVMDAKAQEWCDRIGRCKDIHIYRLVSGNSIEEKLLKNGT-KDLIREVA 1960
Query: 1144 IQSGGYNTEFFKKLDPMELFSGHRTL-----PMKT-----MQKEKAINNGNEVSLSNADV 1193
Q Y+ F + ELF + + P+K + +E +++ ++ +
Sbjct: 1961 AQGNDYSMAFLTQRTIQELFEVYSPMDDTGFPVKAEEFVVLSQEPSVSETIAPKIARPFI 2020
Query: 1194 EA--ALKCVEDEADYMALKRAEQEEAVDNQEFTEEAVGRPEDDELVIEDTVRTDEPTD 1249
EA +++C+E++A + EEAV + AV D E+ + +E D
Sbjct: 2021 EALKSIECLEEDA------QRSTEEAVPGS--SSVAVSSDSDGSRYDEEPSQLEELAD 2070
Score = 89 (36.4 bits), Expect = 5.9e-127, Sum P(6) = 5.9e-127
Identities = 25/105 (23%), Positives = 51/105 (48%)
Query: 22 VAVNISKDVKKFWMKIEKLVLYKHQMEVDVRKKKALDKQLEFLLGQTERYSSMLAENLVD 81
+A +++++ FW IE++V K Q+E++ ++KKAL+ Q G+ R + +
Sbjct: 868 IAATTAREIEYFWSNIEQVVEIKLQVELEEKRKKALNLQKVSRRGKESRLKGF--DTSPE 925
Query: 82 SHKPVQQSPMREQPGIQYKEADENGAEEPGVQSKEADEDDAEQHS 126
+ S + + + DE EE ++ +EA E + H+
Sbjct: 926 HSLDLGISGRKRKASTSLTD-DEVEDEEETIEEEEAHEGLVDHHT 969
Score = 69 (29.3 bits), Expect = 5.9e-127, Sum P(6) = 5.9e-127
Identities = 15/48 (31%), Positives = 27/48 (56%)
Query: 1302 EAISSFENQLRPIDRYAIRFLELWDPIID--KTAVESE-VKFEEREWE 1346
E ++ F QL PI++YA+ +LEL+ + K + + V ++WE
Sbjct: 2066 EELADFMEQLTPIEKYALNYLELFHTTTEQEKERISEDLVMASMKDWE 2113
Score = 50 (22.7 bits), Expect = 5.9e-127, Sum P(6) = 5.9e-127
Identities = 14/46 (30%), Positives = 20/46 (43%)
Query: 1601 LCAVVHEYGPNWSLVSDILYGMTASGYYRGRYRHPVHCCERFRELI 1646
L V + PNW LVSD++ + YR C R+ +I
Sbjct: 2306 LTIVSPAHTPNWDLVSDVVNSCSRI------YRSSKQCRNRYENVI 2345
Score = 42 (19.8 bits), Expect = 5.9e-127, Sum P(6) = 5.9e-127
Identities = 8/20 (40%), Positives = 14/20 (70%)
Query: 322 EIALLQKESEIPVEELLARY 341
E+ L KE+E+P+ +L+ Y
Sbjct: 970 ELTNLAKEAELPLIDLMKLY 989
Score = 37 (18.1 bits), Expect = 1.3e-125, Sum P(6) = 1.3e-125
Identities = 14/50 (28%), Positives = 22/50 (44%)
Query: 1717 RQNFSSSRNGLYLGGSFFSSVTQTSCKSTREPARRVKFTNLGQSSKLLSA 1766
R+ +N L + F+ T KS+ EPA+ +G+ LL A
Sbjct: 2246 REGKEQKKNLLLKQQTPFAKPLPTYVKSSGEPAQDSPDWLIGEDWALLQA 2295
Score = 37 (18.1 bits), Expect = 1.5e-121, Sum P(6) = 1.5e-121
Identities = 8/14 (57%), Positives = 9/14 (64%)
Query: 217 HVQGNGNDLLAGSK 230
H+QGN D LA K
Sbjct: 395 HLQGNMMDFLAFKK 408
>UNIPROTKB|Q96L91 [details] [associations]
symbol:EP400 "E1A-binding protein p400" species:9606 "Homo
sapiens" [GO:0003682 "chromatin binding" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0035267
"NuA4 histone acetyltransferase complex" evidence=IDA] [GO:0043968
"histone H2A acetylation" evidence=IDA] [GO:0043967 "histone H4
acetylation" evidence=IDA] [GO:0016607 "nuclear speck"
evidence=ISS] InterPro:IPR000330 InterPro:IPR001005
InterPro:IPR001650 InterPro:IPR009057 Pfam:PF00176 Pfam:PF00271
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00717 GO:GO:0005524
GO:GO:0003677 GO:GO:0016607 GO:GO:0003682 SUPFAM:SSF46689
GO:GO:0035267 GO:GO:0043968 GO:GO:0043967 GO:GO:0004386
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR017877 PROSITE:PS50090 InterPro:IPR013999
InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529 SMART:SM00573
PROSITE:PS51204 KO:K11320 EMBL:AY044869 EMBL:AC137590 EMBL:AC137632
EMBL:AB040931 EMBL:AK096311 EMBL:BC037208 EMBL:BC064554
EMBL:AB058721 EMBL:U80743 IPI:IPI00064931 IPI:IPI00167535
IPI:IPI00783692 IPI:IPI00798339 IPI:IPI00878154 RefSeq:NP_056224.3
UniGene:Hs.595201 ProteinModelPortal:Q96L91 DIP:DIP-29915N
IntAct:Q96L91 MINT:MINT-1897496 STRING:Q96L91 PhosphoSite:Q96L91
DMDM:209572748 PaxDb:Q96L91 PRIDE:Q96L91 DNASU:57634
Ensembl:ENST00000330386 Ensembl:ENST00000332482
Ensembl:ENST00000333577 Ensembl:ENST00000389561
Ensembl:ENST00000389562 Ensembl:ENST00000537902
Ensembl:ENST00000541296 GeneID:57634 KEGG:hsa:57634 UCSC:uc001ujm.3
UCSC:uc001ujn.3 UCSC:uc021rgq.1 CTD:57634 GeneCards:GC12P132434
H-InvDB:HIX0021564 HGNC:HGNC:11958 HPA:HPA016704 MIM:606265
neXtProt:NX_Q96L91 PharmGKB:PA27808 HOVERGEN:HBG051488
InParanoid:Q96L91 OMA:MQKQKLQ OrthoDB:EOG4RBQHQ ChiTaRS:EP400
GenomeRNAi:57634 NextBio:64345 ArrayExpress:Q96L91 Bgee:Q96L91
CleanEx:HS_EP400 Genevestigator:Q96L91 GermOnline:ENSG00000183495
Uniprot:Q96L91
Length = 3159
Score = 815 (292.0 bits), Expect = 1.3e-125, Sum P(6) = 1.3e-125
Identities = 164/382 (42%), Positives = 224/382 (58%)
Query: 433 PTGITFSTTQVRTKFPFLLKFPLREYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTIA 492
P G TT V+ P LL LR+YQ IGLDWL +Y K LNGILADE GLGKT+ IA
Sbjct: 1069 PKGSARVTTSVKFNAPSLLYGALRDYQKIGLDWLAKLYRKNLNGILADEAGLGKTVQIIA 1128
Query: 493 MLAHLACEKGIWGPHLIVVPTSVMLNWETEFLKWCPAFKILTYFGSAKERKFKRQGWLKP 552
AHLAC +G WGPHL+VV + +L WE E +WCP KIL+Y GS +E K KRQ W +P
Sbjct: 1129 FFAHLACNEGNWGPHLVVVRSCNILKWELELKRWCPGLKILSYIGSHRELKAKRQEWAEP 1188
Query: 553 NSFHVCITTYRLIIQDSKVFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTG 612
NSFHVCIT+Y + F R +WK L++DE +K + W+ + S++R+LL
Sbjct: 1189 NSFHVCITSYTQFFRGLTAFTRVRWKCLVIDEMQRVKGMTERHWEAVFTLQSQQRLLLID 1248
Query: 613 TPLQNDLMELWSLMHFLMPHIFQSHQEFKDWFCNPISGMVEGQEKVNKEVVDRLHNVLRP 672
+PL N +ELW+++HFL+P I + + +P+ E + +VV RLH V +P
Sbjct: 1249 SPLHNTFLELWTMVHFLVPGIS------RPYLSSPLRAPSEESQDYYHKVVIRLHRVTQP 1302
Query: 673 FILRRLKRDVEKQLPMKQEHVIYCRLSKRQRNLYEDFIASSETQATLASANFFGMISVIM 732
FILRR KRDVEKQL K EHV+ CRLS RQ+ LYED I TQ L S +F ++S+++
Sbjct: 1303 FILRRTKRDVEKQLTKKYEHVLKCRLSNRQKALYEDVILQPGTQEALKSGHFVNVLSILV 1362
Query: 733 QLRKVCNHPDLFEGRPIVSSFDMSGIDXXXXXXXXXXXXXXXXXTADLKGLGLLFTNLDF 792
+L+++CNHP L E R SS+ ++ ADL L+ L+
Sbjct: 1363 RLQRICNHPGLVEPRHPGSSYVAGPLEYPSASLILKALERDFWKEADLSMFDLI--GLEN 1420
Query: 793 SMNSWESDELNAIATPASLIKE 814
+ E++ L+ P L++E
Sbjct: 1421 KITRHEAELLSKKKIPRKLMEE 1442
Score = 482 (174.7 bits), Expect = 1.3e-125, Sum P(6) = 1.3e-125
Identities = 136/409 (33%), Positives = 206/409 (50%)
Query: 856 QDRASSVAWWNSLRCQKKPVYSTSLRELLTV-KHPVCDILQQKTVRR--------SYLYS 906
++R + N RC + PVY L + + H RR SY S
Sbjct: 1747 KERLDQIYLVNERRCSQAPVYGRDLLRICALPSHGRVQWRGSLDGRRGKEAGPAHSYTSS 1806
Query: 907 SKL-ADIVLSPVERFQRMIGLVESFMFAIPAARAPAPVCWCSKSGASV-FLQPTYKEKCS 964
S+ ++++L+ + + +++ F IP A P + ++
Sbjct: 1807 SESPSELMLTLCRCGESLQDVIDRVAFVIPPVVAAPPSLRVPRPPPLYSHRMRILRQGLR 1866
Query: 965 EVLSPLLFPIRPAIVRRQVYFPDRRLIQFDCGKLQELAILLRKLKSDGHRALIFTQMTKM 1024
E +P +R R + FP+ RL+QFD GKL+ LAILL+KLKS+G R LI +QM M
Sbjct: 1867 EHAAPYFQQLRQTTAPRLLQFPELRLVQFDSGKLEALAILLQKLKSEGRRVLILSQMILM 1926
Query: 1025 LDILEEFISLYGYTYMRLDGSTQPEERQTLMQRFNTNPKIFLFILSTRSGGVGINLVGAD 1084
LDILE F++ + TY+R+D + E+RQ LM+ FN + +IF ILST S GINLV AD
Sbjct: 1927 LDILEMFLNFHYLTYVRIDENASSEQRQELMRSFNRDRRIFCAILSTHSRTTGINLVEAD 1986
Query: 1085 TVIFYDSDWNPAMDQQAQDRCHRIGQTREVHIYRLISESTIEENILKKANQKRALDDLVI 1144
TV+FYD+D NP MD +AQ+ C RIG+ +++HIYRL+S ++IEE +LK K + ++
Sbjct: 1987 TVVFYDNDLNPVMDAKAQEWCDRIGRCKDIHIYRLVSGNSIEEKLLKNGT-KDLIREVAA 2045
Query: 1145 QSGGYNTEFFKKLDPMELFSGHRTLPMK--TMQKEKAINNGNEVSLSNADVEAALKCVED 1202
Q Y+ F + ELF + + ++ E+ + E S++ A K
Sbjct: 2046 QGNDYSMAFLTQRTIQELFEVYSPMDDAGFPVKAEEFVVLSQEPSVTET---IAPKIARP 2102
Query: 1203 EADYMALKRAEQEEAVDNQEFTEEAVGRPEDDELVIE-DTVRTDEPTDQ 1250
+ ALK E E D Q+ +E V P D L + + + DE Q
Sbjct: 2103 FIE--ALKSIEYLEE-DAQKSAQEGVLGPHTDALSSDSENMPCDEEPSQ 2148
Score = 92 (37.4 bits), Expect = 1.3e-125, Sum P(6) = 1.3e-125
Identities = 28/100 (28%), Positives = 54/100 (54%)
Query: 22 VAVNISKDVKKFWMKIEKLVLYKHQMEVDVRKKKALDKQLEFLLGQTERYSSM--LAENL 79
+A + +++++ FW IE++V K ++E++ ++KKAL+ Q G+ R L E+
Sbjct: 869 IAASTAREIECFWSNIEQVVEIKLRVELEEKRKKALNLQKVSRRGKELRPKGFDALQESS 928
Query: 80 VDSHKPVQQSPMREQPGIQYKEADENGAEEPGVQSKEADE 119
+DS S + + I + DE EE ++ +EA+E
Sbjct: 929 LDSG----MSGRKRKASISLTD-DEVDDEEETIEEEEANE 963
Score = 72 (30.4 bits), Expect = 1.3e-125, Sum P(6) = 1.3e-125
Identities = 17/48 (35%), Positives = 26/48 (54%)
Query: 1302 EAISSFENQLRPIDRYAIRFLELWDPIIDKTAV---ESEVKFEEREWE 1346
E ++ F QL PI++YA+ +LEL+ I++ E V R WE
Sbjct: 2150 EELADFMEQLTPIEKYALNYLELFHTSIEQEKERNSEDAVMTAVRAWE 2197
Score = 50 (22.7 bits), Expect = 1.3e-125, Sum P(6) = 1.3e-125
Identities = 14/46 (30%), Positives = 20/46 (43%)
Query: 1601 LCAVVHEYGPNWSLVSDILYGMTASGYYRGRYRHPVHCCERFRELI 1646
L V + PNW LVSD++ + YR C R+ +I
Sbjct: 2390 LTIVSPAHTPNWDLVSDVVNSCSRI------YRSSKQCRNRYENVI 2429
Score = 43 (20.2 bits), Expect = 1.3e-125, Sum P(6) = 1.3e-125
Identities = 8/20 (40%), Positives = 15/20 (75%)
Query: 322 EIALLQKESEIPVEELLARY 341
E++ L KE+E+P+ +L+ Y
Sbjct: 971 ELSNLAKEAELPLLDLMKLY 990
Score = 40 (19.1 bits), Expect = 1.4e-124, Sum P(6) = 1.4e-124
Identities = 10/51 (19%), Positives = 24/51 (47%)
Query: 1441 LTSESKAVKEEPSVEPMSIDDDFYDEDATFSDAMSPPSTSQKKRKKAELAL 1491
L + +AV+++ +++P + + + ++ P QK A+ AL
Sbjct: 2967 LKLKQQAVQQQKAIQPQAAQGPAAVQQKITAQQITTPGAQQKVAYAAQPAL 3017
Score = 40 (19.1 bits), Expect = 3.4e-120, Sum P(6) = 3.4e-120
Identities = 14/48 (29%), Positives = 22/48 (45%)
Query: 182 PLQELLKRYAVDKVGRESSAEMGEDEAEPTVVEEGHVQGNGNDLLAGS 229
PLQ L++ +D + E E E+E + +E V G D G+
Sbjct: 413 PLQAYLRQNDLD-IEEEEEEEEEEEEKSEVINDEVKVV-TGKDGQTGT 458
Score = 38 (18.4 bits), Expect = 7.8e-77, Sum P(4) = 7.8e-77
Identities = 8/20 (40%), Positives = 15/20 (75%)
Query: 1864 ASSAFPANDAKLRSVPKSQS 1883
+++A PA+ AKLR+ +Q+
Sbjct: 1543 STAASPAHPAKLRAQTTAQA 1562
>UNIPROTKB|I3L7Y4 [details] [associations]
symbol:EP400 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
Pfam:PF00176 PROSITE:PS51194 SMART:SM00717 GO:GO:0005524
GO:GO:0003677 GO:GO:0003682 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR017877 PROSITE:PS50090
InterPro:IPR013999 InterPro:IPR014012 InterPro:IPR006562
Pfam:PF07529 SMART:SM00573 PROSITE:PS51204
GeneTree:ENSGT00530000063427 EMBL:CU469318 EMBL:CU469455
Ensembl:ENSSSCT00000027939 Uniprot:I3L7Y4
Length = 2789
Score = 786 (281.7 bits), Expect = 4.3e-125, Sum P(6) = 4.3e-125
Identities = 150/321 (46%), Positives = 202/321 (62%)
Query: 433 PTGITFSTTQVRTKFPFLLKFPLREYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTIA 492
P G +T V+ P LL LR+YQ IGLDWL +Y K LNGILADE GLGKT+ IA
Sbjct: 1059 PKGSARISTGVKLTAPALLYGALRDYQKIGLDWLAKLYRKNLNGILADEAGLGKTVQIIA 1118
Query: 493 MLAHLACEKGIWGPHLIVVPTSVMLNWETEFLKWCPAFKILTYFGSAKERKFKRQGWLKP 552
AHLAC +G WGPHL++V + +L WE E +WCP K L Y GS +E K KRQ W +P
Sbjct: 1119 FFAHLACNEGNWGPHLVIVRSCNILKWELELKRWCPGLKTLLYVGSHRELKAKRQEWSEP 1178
Query: 553 NSFHVCITTYRLIIQDSKVFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTG 612
NSF++CIT+Y+ + F R +WK L++DE +K + W+ + S++R+LL
Sbjct: 1179 NSFNICITSYKQFFRGHASFPRARWKCLVIDEMQRVKGMTERHWEAVFALQSQQRLLLID 1238
Query: 613 TPLQNDLMELWSLMHFLMPHIFQSHQEFKDWFCNPISGMVEGQEKVNKEVVDRLHNVLRP 672
PL N +ELW+++HFL+P I + + F P+ E + +VV RLH V +P
Sbjct: 1239 APLHNTFLELWTMVHFLIPGISRPYLHF------PLKAPSEENQDYYHKVVIRLHRVTQP 1292
Query: 673 FILRRLKRDVEKQLPMKQEHVIYCRLSKRQRNLYEDFIASSETQATLASANFFGMISVIM 732
FILRR KRDVEKQL K EHV+ CRLS RQ+ LYED I TQ L S +F ++S+++
Sbjct: 1293 FILRRTKRDVEKQLTKKYEHVLKCRLSNRQKALYEDVILQPGTQEALKSGHFVDVLSILL 1352
Query: 733 QLRKVCNHPDLFEGRPIVSSF 753
+L+++CNHP L E R SS+
Sbjct: 1353 RLQRICNHPGLVEPRLPESSY 1373
Score = 492 (178.3 bits), Expect = 4.3e-125, Sum P(6) = 4.3e-125
Identities = 129/394 (32%), Positives = 207/394 (52%)
Query: 856 QDRASSVAWWNSLRCQKKPVYSTSLR---ELLTVKH-PVCDILQQKTVR-----RSYLYS 906
++R + + N RC + P+Y L L+ +H P + T + ++
Sbjct: 1660 KERLDQIYFVNERRCSRAPIYGRDLLGVCSLMGREHMPWLRASESSTGKVTGPVSQFISP 1719
Query: 907 SKLA-DIVLSPVERFQRMIGLVESFMFAIPAARAPAPVCWCSKSGASVFLQPT--YKEKC 963
SK D++L+ +R + + ++ + IP A P W ++ S++ ++
Sbjct: 1720 SKSQRDLILTLTQRQESLQDVINRVVCVIPPVVAAPPRLWVARP-PSLYSHKMRLFRHGL 1778
Query: 964 SEVLSPLLFPIRPAIVRRQVYFPDRRLIQFDCGKLQELAILLRKLKSDGHRALIFTQMTK 1023
E +P ++ R + FP+ RL+QFD GKL+ LA+LL+KL+S+G R LI +QM
Sbjct: 1779 QEHTAPYAQQLQQMTALRSLQFPELRLVQFDSGKLEALAVLLQKLRSEGRRVLILSQMVL 1838
Query: 1024 MLDILEEFISLYGYTYMRLDGSTQPEERQTLMQRFNTNPKIFLFILSTRSGGVGINLVGA 1083
MLDILE F++ + TY+R+D + E+RQ LM+ FN + +IF +LST S G++LV A
Sbjct: 1839 MLDILEMFLNFHYLTYIRIDENANSEQRQELMRSFNRDRRIFCALLSTHSRTTGVSLVEA 1898
Query: 1084 DTVIFYDSDWNPAMDQQAQDRCHRIGQTREVHIYRLISESTIEENILKKANQKRALDDLV 1143
D V+FYD+D NP MD +AQ+ C RIG+ R+VHIYRL+S ++IEE +LK K + ++
Sbjct: 1899 DAVVFYDNDLNPVMDAKAQEWCDRIGRRRDVHIYRLVSGNSIEEKLLKNGT-KDLIREVA 1957
Query: 1144 IQSGGYNTEFFKKLDPMELFSGHRTLPMK--TMQKEKAINNGNEVSLSNADVEAALKCVE 1201
Q Y+ F + ELF + + ++ E+ + E S++ A K
Sbjct: 1958 AQGNDYSMAFLTQRTIQELFEVYSPMDDAGFPVKAEEFVVLSQEPSVTET---IAPKIAR 2014
Query: 1202 DEADYMALKRAEQEEAVDNQEFTEEAVGRPEDDE 1235
+ ALK E E D Q+ EEAV D +
Sbjct: 2015 PFIE--ALKSIEYLEE-DAQKPFEEAVPEVSDSD 2045
Score = 100 (40.3 bits), Expect = 4.3e-125, Sum P(6) = 4.3e-125
Identities = 28/100 (28%), Positives = 55/100 (55%)
Query: 22 VAVNISKDVKKFWMKIEKLVLYKHQMEVDVRKKKALDKQLEFLLGQTERYSSM--LAENL 79
+A + +++++ FW IE++V K Q+E++ ++KKAL Q G+ R + L+EN
Sbjct: 859 IAASTAREIEYFWSNIEQVVEIKLQVELEEKRKKALHLQKVSRKGKELRSKGLDVLSENF 918
Query: 80 VDSHKPVQQSPMREQPGIQYKEADENGAEEPGVQSKEADE 119
+DS ++ R + E ++ EE ++ +EA+E
Sbjct: 919 LDSGTSGRKR--RASTSLTDDEVED---EEETIEEEEANE 953
Score = 77 (32.2 bits), Expect = 4.3e-125, Sum P(6) = 4.3e-125
Identities = 18/48 (37%), Positives = 27/48 (56%)
Query: 1302 EAISSFENQLRPIDRYAIRFLELWDPIIDKTAV---ESEVKFEEREWE 1346
E ++ F QL PI++YA+ +LEL+ ID+ E V +EWE
Sbjct: 2057 EELADFMGQLTPIEKYALNYLELFHTSIDQEKERNSEGAVLSAVQEWE 2104
Score = 48 (22.0 bits), Expect = 4.3e-125, Sum P(6) = 4.3e-125
Identities = 12/29 (41%), Positives = 16/29 (55%)
Query: 1601 LCAVVHEYGPNWSLVSDILYGMTASGYYR 1629
L V + PNW LVSD++ + S YR
Sbjct: 2297 LTIVSPAHTPNWDLVSDVVN--SCSRIYR 2323
Score = 43 (20.2 bits), Expect = 4.3e-125, Sum P(6) = 4.3e-125
Identities = 8/20 (40%), Positives = 15/20 (75%)
Query: 322 EIALLQKESEIPVEELLARY 341
E++ L KE+E+P+ +L+ Y
Sbjct: 961 ELSNLAKEAELPLIDLMKLY 980
Score = 37 (18.1 bits), Expect = 1.6e-118, Sum P(6) = 1.6e-118
Identities = 8/14 (57%), Positives = 9/14 (64%)
Query: 217 HVQGNGNDLLAGSK 230
H+QGN D LA K
Sbjct: 388 HLQGNMMDFLAFKK 401
>UNIPROTKB|I3LPX4 [details] [associations]
symbol:EP400 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043968 "histone H2A acetylation" evidence=IEA]
[GO:0043967 "histone H4 acetylation" evidence=IEA] [GO:0035267
"NuA4 histone acetyltransferase complex" evidence=IEA] [GO:0016607
"nuclear speck" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] InterPro:IPR000330 InterPro:IPR001005
InterPro:IPR001650 Pfam:PF00176 PROSITE:PS51194 SMART:SM00717
GO:GO:0005524 GO:GO:0003677 GO:GO:0016607 GO:GO:0003682
GO:GO:0035267 GO:GO:0043968 GO:GO:0043967 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR017877
PROSITE:PS50090 InterPro:IPR013999 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 SMART:SM00573 PROSITE:PS51204
GeneTree:ENSGT00530000063427 OMA:MQKQKLQ EMBL:CU469318
EMBL:CU469455 Ensembl:ENSSSCT00000024610 Uniprot:I3LPX4
Length = 2865
Score = 786 (281.7 bits), Expect = 5.6e-125, Sum P(6) = 5.6e-125
Identities = 150/321 (46%), Positives = 202/321 (62%)
Query: 433 PTGITFSTTQVRTKFPFLLKFPLREYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTIA 492
P G +T V+ P LL LR+YQ IGLDWL +Y K LNGILADE GLGKT+ IA
Sbjct: 1062 PKGSARISTGVKLTAPALLYGALRDYQKIGLDWLAKLYRKNLNGILADEAGLGKTVQIIA 1121
Query: 493 MLAHLACEKGIWGPHLIVVPTSVMLNWETEFLKWCPAFKILTYFGSAKERKFKRQGWLKP 552
AHLAC +G WGPHL++V + +L WE E +WCP K L Y GS +E K KRQ W +P
Sbjct: 1122 FFAHLACNEGNWGPHLVIVRSCNILKWELELKRWCPGLKTLLYVGSHRELKAKRQEWSEP 1181
Query: 553 NSFHVCITTYRLIIQDSKVFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTG 612
NSF++CIT+Y+ + F R +WK L++DE +K + W+ + S++R+LL
Sbjct: 1182 NSFNICITSYKQFFRGHASFPRARWKCLVIDEMQRVKGMTERHWEAVFALQSQQRLLLID 1241
Query: 613 TPLQNDLMELWSLMHFLMPHIFQSHQEFKDWFCNPISGMVEGQEKVNKEVVDRLHNVLRP 672
PL N +ELW+++HFL+P I + + F P+ E + +VV RLH V +P
Sbjct: 1242 APLHNTFLELWTMVHFLIPGISRPYLHF------PLKAPSEENQDYYHKVVIRLHRVTQP 1295
Query: 673 FILRRLKRDVEKQLPMKQEHVIYCRLSKRQRNLYEDFIASSETQATLASANFFGMISVIM 732
FILRR KRDVEKQL K EHV+ CRLS RQ+ LYED I TQ L S +F ++S+++
Sbjct: 1296 FILRRTKRDVEKQLTKKYEHVLKCRLSNRQKALYEDVILQPGTQEALKSGHFVDVLSILL 1355
Query: 733 QLRKVCNHPDLFEGRPIVSSF 753
+L+++CNHP L E R SS+
Sbjct: 1356 RLQRICNHPGLVEPRLPESSY 1376
Score = 492 (178.3 bits), Expect = 5.6e-125, Sum P(6) = 5.6e-125
Identities = 129/394 (32%), Positives = 207/394 (52%)
Query: 856 QDRASSVAWWNSLRCQKKPVYSTSLR---ELLTVKH-PVCDILQQKTVR-----RSYLYS 906
++R + + N RC + P+Y L L+ +H P + T + ++
Sbjct: 1736 KERLDQIYFVNERRCSRAPIYGRDLLGVCSLMGREHMPWLRASESSTGKVTGPVSQFISP 1795
Query: 907 SKLA-DIVLSPVERFQRMIGLVESFMFAIPAARAPAPVCWCSKSGASVFLQPT--YKEKC 963
SK D++L+ +R + + ++ + IP A P W ++ S++ ++
Sbjct: 1796 SKSQRDLILTLTQRQESLQDVINRVVCVIPPVVAAPPRLWVARP-PSLYSHKMRLFRHGL 1854
Query: 964 SEVLSPLLFPIRPAIVRRQVYFPDRRLIQFDCGKLQELAILLRKLKSDGHRALIFTQMTK 1023
E +P ++ R + FP+ RL+QFD GKL+ LA+LL+KL+S+G R LI +QM
Sbjct: 1855 QEHTAPYAQQLQQMTALRSLQFPELRLVQFDSGKLEALAVLLQKLRSEGRRVLILSQMVL 1914
Query: 1024 MLDILEEFISLYGYTYMRLDGSTQPEERQTLMQRFNTNPKIFLFILSTRSGGVGINLVGA 1083
MLDILE F++ + TY+R+D + E+RQ LM+ FN + +IF +LST S G++LV A
Sbjct: 1915 MLDILEMFLNFHYLTYIRIDENANSEQRQELMRSFNRDRRIFCALLSTHSRTTGVSLVEA 1974
Query: 1084 DTVIFYDSDWNPAMDQQAQDRCHRIGQTREVHIYRLISESTIEENILKKANQKRALDDLV 1143
D V+FYD+D NP MD +AQ+ C RIG+ R+VHIYRL+S ++IEE +LK K + ++
Sbjct: 1975 DAVVFYDNDLNPVMDAKAQEWCDRIGRRRDVHIYRLVSGNSIEEKLLKNGT-KDLIREVA 2033
Query: 1144 IQSGGYNTEFFKKLDPMELFSGHRTLPMK--TMQKEKAINNGNEVSLSNADVEAALKCVE 1201
Q Y+ F + ELF + + ++ E+ + E S++ A K
Sbjct: 2034 AQGNDYSMAFLTQRTIQELFEVYSPMDDAGFPVKAEEFVVLSQEPSVTET---IAPKIAR 2090
Query: 1202 DEADYMALKRAEQEEAVDNQEFTEEAVGRPEDDE 1235
+ ALK E E D Q+ EEAV D +
Sbjct: 2091 PFIE--ALKSIEYLEE-DAQKPFEEAVPEVSDSD 2121
Score = 100 (40.3 bits), Expect = 5.6e-125, Sum P(6) = 5.6e-125
Identities = 28/100 (28%), Positives = 55/100 (55%)
Query: 22 VAVNISKDVKKFWMKIEKLVLYKHQMEVDVRKKKALDKQLEFLLGQTERYSSM--LAENL 79
+A + +++++ FW IE++V K Q+E++ ++KKAL Q G+ R + L+EN
Sbjct: 862 IAASTAREIEYFWSNIEQVVEIKLQVELEEKRKKALHLQKVSRKGKELRSKGLDVLSENF 921
Query: 80 VDSHKPVQQSPMREQPGIQYKEADENGAEEPGVQSKEADE 119
+DS ++ R + E ++ EE ++ +EA+E
Sbjct: 922 LDSGTSGRKR--RASTSLTDDEVED---EEETIEEEEANE 956
Score = 77 (32.2 bits), Expect = 5.6e-125, Sum P(6) = 5.6e-125
Identities = 18/48 (37%), Positives = 27/48 (56%)
Query: 1302 EAISSFENQLRPIDRYAIRFLELWDPIIDKTAV---ESEVKFEEREWE 1346
E ++ F QL PI++YA+ +LEL+ ID+ E V +EWE
Sbjct: 2133 EELADFMGQLTPIEKYALNYLELFHTSIDQEKERNSEGAVLSAVQEWE 2180
Score = 48 (22.0 bits), Expect = 5.6e-125, Sum P(6) = 5.6e-125
Identities = 12/29 (41%), Positives = 16/29 (55%)
Query: 1601 LCAVVHEYGPNWSLVSDILYGMTASGYYR 1629
L V + PNW LVSD++ + S YR
Sbjct: 2373 LTIVSPAHTPNWDLVSDVVN--SCSRIYR 2399
Score = 43 (20.2 bits), Expect = 5.6e-125, Sum P(6) = 5.6e-125
Identities = 8/20 (40%), Positives = 15/20 (75%)
Query: 322 EIALLQKESEIPVEELLARY 341
E++ L KE+E+P+ +L+ Y
Sbjct: 964 ELSNLAKEAELPLIDLMKLY 983
Score = 37 (18.1 bits), Expect = 2.1e-118, Sum P(6) = 2.1e-118
Identities = 8/14 (57%), Positives = 9/14 (64%)
Query: 217 HVQGNGNDLLAGSK 230
H+QGN D LA K
Sbjct: 388 HLQGNMMDFLAFKK 401
>RGD|1310969 [details] [associations]
symbol:Ino80 "INO80 homolog (S. cerevisiae)" species:10116
"Rattus norvegicus" [GO:0000070 "mitotic sister chromatid
segregation" evidence=ISO] [GO:0000724 "double-strand break repair
via homologous recombination" evidence=ISO] [GO:0003677 "DNA
binding" evidence=IEA;ISO] [GO:0003678 "DNA helicase activity"
evidence=ISO] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO] [GO:0006200 "ATP catabolic process" evidence=ISO]
[GO:0006302 "double-strand break repair" evidence=ISO] [GO:0006338
"chromatin remodeling" evidence=ISO] [GO:0010571 "positive
regulation of DNA replication involved in S phase" evidence=ISO]
[GO:0016887 "ATPase activity" evidence=ISO] [GO:0030307 "positive
regulation of cell growth" evidence=ISO] [GO:0031011 "Ino80
complex" evidence=ISO] [GO:0032508 "DNA duplex unwinding"
evidence=ISO] [GO:0034644 "cellular response to UV" evidence=ISO]
[GO:0043014 "alpha-tubulin binding" evidence=ISO] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=ISO] [GO:0051225 "spindle assembly"
evidence=ISO] [GO:0070914 "UV-damage excision repair" evidence=ISO]
[GO:0071479 "cellular response to ionizing radiation" evidence=ISO]
[GO:2000045 "regulation of G1/S transition of mitotic cell cycle"
evidence=ISO] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271 Pfam:PF13892
PROSITE:PS51194 PROSITE:PS51413 SMART:SM00490 RGD:1310969
GO:GO:0005524 GO:GO:0003677 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GeneTree:ENSGT00680000100052
IPI:IPI00569811 Ensembl:ENSRNOT00000031672 UCSC:RGD:1310969
Uniprot:D4A6Q6
Length = 1553
Score = 788 (282.4 bits), Expect = 2.1e-124, Sum P(3) = 2.1e-124
Identities = 145/318 (45%), Positives = 213/318 (66%)
Query: 448 PFLLKFPLREYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTIAMLAHLACEKGIWGPH 507
P + L+ YQ G++WL +YE+ +NGILADEMGLGKT+ +IA+LAHLA + IWGP
Sbjct: 513 PTIFNGKLKGYQLKGMNWLANLYEQGINGILADEMGLGKTVQSIALLAHLAERENIWGPF 572
Query: 508 LIVVPTSVMLNWETEFLKWCPAFKILTYFGSAKERKFKRQGWLKPNSFHVCITTYRLIIQ 567
LI+ P S + NW EF ++ P FK+L Y+G+ +RK K+ + + FHV IT+Y+L++Q
Sbjct: 573 LIISPASTLNNWHQEFTRFVPKFKVLPYWGNPHDRKKKKTLYTQDAPFHVVITSYQLVVQ 632
Query: 568 DSKVFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPLQNDLMELWSLMH 627
D K F+R KW+Y++LDEA +K+ S RW+ LL F + R+LLTGTP+QN + ELW+L+H
Sbjct: 633 DVKYFQRVKWQYMVLDEAQALKSSSSVRWKILLQFQCRNRLLLTGTPIQNTMAELWALLH 692
Query: 628 FLMPHIFQSHQEFKDWFCNPISGMVEGQEKVNKEVVDRLHNVLRPFILRRLKRDVEKQLP 687
F+MP +F SH+EF +WF I E + +++ + RLH +L+PF+LRR+K+DVE +L
Sbjct: 693 FIMPTLFDSHEEFNEWFSKDIESHAENKSAIDENQLSRLHMILKPFMLRRIKKDVENELS 752
Query: 688 MKQEHVIYCRLSKRQRNLY---------EDFIASSETQATLASANFFGMISVIMQLRKVC 738
K E ++YC+L+ RQ+ LY ED + SS A +++++MQ RKVC
Sbjct: 753 DKIEILMYCQLTSRQKLLYQALKNKISIEDLLQSSMGSTQQAQNTTSSLMNLVMQFRKVC 812
Query: 739 NHPDLFEGRPIVSSFDMS 756
NHP+LFE + S F +S
Sbjct: 813 NHPELFERQETWSPFHIS 830
Score = 502 (181.8 bits), Expect = 2.1e-124, Sum P(3) = 2.1e-124
Identities = 110/240 (45%), Positives = 147/240 (61%)
Query: 971 LFPIRPAIVRRQVYFPDRRLIQFDCGKLQELAILLRKLKSDGHRALIFTQMTKMLDILEE 1030
L IRP + P + + D GKL L ILL +LKS GHR LI++QMT+M+D+LEE
Sbjct: 1073 LLSIRPQNGWSFIRIPGKESLITDSGKLYALDILLTRLKSQGHRVLIYSQMTRMIDLLEE 1132
Query: 1031 FISLYGYTYMRLDGSTQPEERQTLMQRFNTNPKIFLFILSTRSGGVGINLVGADTVIFYD 1090
++ +TYMRLDGS++ ER+ ++ F T IF+F+LSTR+GG+GINL ADTVIFYD
Sbjct: 1133 YMVYRKHTYMRLDGSSKISERRDMVADFQTRNDIFVFLLSTRAGGLGINLTAADTVIFYD 1192
Query: 1091 SDWNPAMDQQAQDRCHRIGQTREVHIYRLISESTIEENILKKANQKRALDDLVIQSGGYN 1150
SDWNP +DQQA DR HR+GQT++V +YRLI + TIEE IL++A +K + +VI G +
Sbjct: 1193 SDWNPTVDQQAMDRAHRLGQTKQVTVYRLICKGTIEERILQRAKEKSEIQRMVISGGNFK 1252
Query: 1151 TEFFKKLDPMELFSGHRTLPMKTM--QKEKAINN-GNEVSLSNADVE--AALKCVEDEAD 1205
+ K + + L L K Q+EK N V E A K EDE D
Sbjct: 1253 PDTLKPKEVVSLLLDDEELEKKLRLRQEEKRQQEESNRVKERKRKREKYAEKKKKEDELD 1312
Score = 81 (33.6 bits), Expect = 2.1e-124, Sum P(3) = 2.1e-124
Identities = 19/91 (20%), Positives = 45/91 (49%)
Query: 31 KKFWMKIEKLVLYKHQMEVDVRKKKALDKQLEFLLGQTERYSSMLAENLVDSHKPVQQSP 90
K+ + EK L + +++ ++R+ K ++L FL+ QTE Y+ ++ H +Q+
Sbjct: 357 KEHRKRAEKEALEQRKLDEEMREAKRQQRKLNFLITQTELYAHFMSRKRDMGHDGIQEEI 416
Query: 91 MRE-QPGIQYKEADENGAEEPGVQSKEADED 120
+R+ + ++ D G + ++ D +
Sbjct: 417 LRKLEDSSTQRQIDIGGGVVVNITQEDYDSN 447
>UNIPROTKB|F1MLB1 [details] [associations]
symbol:F1MLB1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0043968 "histone H2A acetylation" evidence=IEA]
[GO:0043967 "histone H4 acetylation" evidence=IEA] [GO:0035267
"NuA4 histone acetyltransferase complex" evidence=IEA] [GO:0016607
"nuclear speck" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] InterPro:IPR000330 InterPro:IPR001005
InterPro:IPR001650 Pfam:PF00176 PROSITE:PS51194 SMART:SM00717
GO:GO:0005524 GO:GO:0003677 GO:GO:0016607 GO:GO:0003682
GO:GO:0035267 GO:GO:0043968 GO:GO:0043967 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR017877
PROSITE:PS50090 InterPro:IPR013999 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 SMART:SM00573 PROSITE:PS51204
GeneTree:ENSGT00530000063427 OMA:MQKQKLQ EMBL:DAAA02044957
EMBL:DAAA02044956 IPI:IPI01018591 Ensembl:ENSBTAT00000027216
Uniprot:F1MLB1
Length = 3137
Score = 784 (281.0 bits), Expect = 1.9e-123, Sum P(7) = 1.9e-123
Identities = 159/382 (41%), Positives = 216/382 (56%)
Query: 433 PTGITFSTTQVRTKFPFLLKFPLREYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTIA 492
P G +T V+ P LL LR+YQ IGLDWL +Y K LNGILADE GLGKT+ IA
Sbjct: 1067 PKGSARISTAVKLNAPALLYGALRDYQKIGLDWLAKLYRKNLNGILADEAGLGKTVQIIA 1126
Query: 493 MLAHLACEKGIWGPHLIVVPTSVMLNWETEFLKWCPAFKILTYFGSAKERKFKRQGWLKP 552
AHLAC +G WGPHL++V + +L WE E +WCP K L Y GS +E K KRQ W +P
Sbjct: 1127 FFAHLACNEGNWGPHLVIVRSCNILKWELELKRWCPGLKTLLYVGSHRELKAKRQEWTEP 1186
Query: 553 NSFHVCITTYRLIIQDSKVFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTG 612
NSF++CIT+Y+ + F R +WK L++DE +K + W+ + S++R+LL
Sbjct: 1187 NSFNICITSYKQFFKGFASFTRVRWKCLVIDEMQRVKGMTERHWEAVFTLQSQQRLLLID 1246
Query: 613 TPLQNDLMELWSLMHFLMPHIFQSHQEFKDWFCNPISGMVEGQEKVNKEVVDRLHNVLRP 672
PL N +ELW+++HFL+P I + + F P+ E + +VV RLH V +P
Sbjct: 1247 APLHNTFLELWTMVHFLIPGISRPYLHF------PLKAPNEENQDYYHKVVIRLHRVTQP 1300
Query: 673 FILRRLKRDVEKQLPMKQEHVIYCRLSKRQRNLYEDFIASSETQATLASANFFGMISVIM 732
FILRR KRDVEKQL K EHV+ CRLS RQ+ LYED I TQ L S +F ++S+++
Sbjct: 1301 FILRRTKRDVEKQLTKKYEHVLKCRLSNRQKALYEDVILQPGTQEALKSGHFVDVLSILL 1360
Query: 733 QLRKVCNHPDLFEGRPIVSSFDMSGIDXXXXXXXXXXXXXXXXXTADLKGLGLLFTNLDF 792
+L+++CNHP L R SS+ + DL LL L+
Sbjct: 1361 RLQRICNHPGLVAPRLPESSYTAGPLQYRSASLVLKALDRDFWKETDLSIFDLL--GLEN 1418
Query: 793 SMNSWESDELNAIATPASLIKE 814
M E++ L L +E
Sbjct: 1419 KMTRHEAELLGKKKVTRKLFEE 1440
Score = 486 (176.1 bits), Expect = 1.9e-123, Sum P(7) = 1.9e-123
Identities = 140/439 (31%), Positives = 221/439 (50%)
Query: 856 QDRASSVAWWNSLRCQKKPVYSTSLRELLTV----KHP---VCDILQQK---TVRRSYLY 905
++R + + N RC + P+Y L + ++ + P D K R
Sbjct: 1746 KERLDQIYFVNERRCSRSPIYGRDLLGICSLPGREQVPWFRASDRGHGKGAGPASRHTSP 1805
Query: 906 SSKLADIVLSPVERFQRMIGLVESFMFAIPAARAPAPVCWCSKSGASVFLQPTYKEKC-S 964
S D++L+ +R + + +++ + IP A P W ++ + + C
Sbjct: 1806 SKSHRDLILTLTQRQESLQDVIDRVVCVIPPVVAAPPHLWVARPPSLYSHRMRLFRHCLR 1865
Query: 965 EVLSPLLFPIRPAIVRRQVYFPDRRLIQFDCGKLQELAILLRKLKSDGHRALIFTQMTKM 1024
E +P ++ + FP+ RL+QFD GKL+ LAILL+KLKS+G R LI +QM M
Sbjct: 1866 EHTAPYAQQLQRMTALHSLRFPELRLVQFDSGKLEALAILLQKLKSEGRRVLILSQMVLM 1925
Query: 1025 LDILEEFISLYGYTYMRLDGSTQPEERQTLMQRFNTNPKIFLFILSTRSGGVGINLVGAD 1084
LDILE F++ + TY+R+D + E+RQ LM+ FN + +IF +LST S G++LV AD
Sbjct: 1926 LDILEMFLNFHYLTYIRIDENANSEQRQELMRSFNRDRRIFCALLSTHSRATGVSLVEAD 1985
Query: 1085 TVIFYDSDWNPAMDQQAQDRCHRIGQTREVHIYRLISESTIEENILKKANQKRALDDLVI 1144
V+FYD D NP MD +AQ+ C RIG+ ++VHIYRL+S ++IEE +LK K + ++
Sbjct: 1986 AVVFYDHDLNPVMDAKAQEWCDRIGRRKDVHIYRLVSGNSIEEKLLKNGT-KDLIREVAA 2044
Query: 1145 QSGGYNTEFFKKLDPMELFSGHRTLPMK--TMQKEKAINNGNEVSLSNADVEAALKCVED 1202
Q Y+ F + ELF + + ++ E+ + E S++ A K
Sbjct: 2045 QGNDYSMAFLTQRTIQELFEVYPPMDDTGFPVKAEEFVVLSQEPSVTET---IAPKIARP 2101
Query: 1203 EADYMALKRAEQEEAVDNQEFTEEAV-GRPEDD-ELVIEDTVRTDEPTDQGGCMT----- 1255
+ ALK E E D Q+ EEAV G P+ E+ + +E D G +T
Sbjct: 2102 FIE--ALKSIEYLEEEDAQKPAEEAVPGSPDSSGSRWDEEPSQLEELADFMGQLTPIEKY 2159
Query: 1256 ANNDNGMMLTGNDPKEERA 1274
A N + T D ++ER+
Sbjct: 2160 ALNYLELFHTSIDQEKERS 2178
Score = 98 (39.6 bits), Expect = 1.9e-123, Sum P(7) = 1.9e-123
Identities = 27/100 (27%), Positives = 54/100 (54%)
Query: 22 VAVNISKDVKKFWMKIEKLVLYKHQMEVDVRKKKALDKQLEFLLGQTERYSSM--LAENL 79
+A + +++++ FW IE++V K Q+E++ ++KKAL+ Q G+ R + L EN
Sbjct: 867 IAASTAREIEYFWSNIEQVVEIKLQVELEEKRKKALNLQKVSRKGKELRPKGLDVLPENF 926
Query: 80 VDSHKPVQQSPMREQPGIQYKEADENGAEEPGVQSKEADE 119
+DS + + + E ++ EE ++ +EA+E
Sbjct: 927 LDSG--ISGRKRKASTSLTDDEVED---EEETIEEEEANE 961
Score = 84 (34.6 bits), Expect = 1.9e-123, Sum P(7) = 1.9e-123
Identities = 19/48 (39%), Positives = 28/48 (58%)
Query: 1302 EAISSFENQLRPIDRYAIRFLELWDPIIDKT---AVESEVKFEEREWE 1346
E ++ F QL PI++YA+ +LEL+ ID+ + E V REWE
Sbjct: 2144 EELADFMGQLTPIEKYALNYLELFHTSIDQEKERSSEGAVMTAVREWE 2191
Score = 48 (22.0 bits), Expect = 1.9e-123, Sum P(7) = 1.9e-123
Identities = 12/29 (41%), Positives = 16/29 (55%)
Query: 1601 LCAVVHEYGPNWSLVSDILYGMTASGYYR 1629
L V + PNW LVSD++ + S YR
Sbjct: 2384 LTIVSPAHTPNWDLVSDVVN--SCSRIYR 2410
Score = 43 (20.2 bits), Expect = 1.9e-123, Sum P(7) = 1.9e-123
Identities = 8/20 (40%), Positives = 15/20 (75%)
Query: 322 EIALLQKESEIPVEELLARY 341
E++ L KE+E+P+ +L+ Y
Sbjct: 969 ELSNLAKEAELPLIDLMKLY 988
Score = 42 (19.8 bits), Expect = 1.2e-117, Sum P(7) = 1.2e-117
Identities = 14/48 (29%), Positives = 21/48 (43%)
Query: 182 PLQELLKRYAVDKVGRESSAEMGEDEAEPTVVEEGHVQGNGNDLLAGS 229
PLQ L++ +D E E E+E + +E V G D G+
Sbjct: 408 PLQAYLRQNDLDLEEEEEEEEEEEEEKSEVINDEVKVV-TGKDGQTGT 454
Score = 39 (18.8 bits), Expect = 1.9e-123, Sum P(7) = 1.9e-123
Identities = 6/20 (30%), Positives = 12/20 (60%)
Query: 1910 SEIQHSSPEPVSNQSVATKD 1929
+++ H+ P V + + AT D
Sbjct: 2667 AQVVHTQPRAVGSPATATSD 2686
Score = 37 (18.1 bits), Expect = 4.0e-117, Sum P(7) = 4.0e-117
Identities = 8/14 (57%), Positives = 9/14 (64%)
Query: 217 HVQGNGNDLLAGSK 230
H+QGN D LA K
Sbjct: 390 HLQGNMMDFLAFKK 403
>UNIPROTKB|E1BAN8 [details] [associations]
symbol:INO80 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:2000045 "regulation of G1/S transition of mitotic cell
cycle" evidence=IEA] [GO:0071479 "cellular response to ionizing
radiation" evidence=IEA] [GO:0070914 "UV-damage excision repair"
evidence=IEA] [GO:0051225 "spindle assembly" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0043014 "alpha-tubulin
binding" evidence=IEA] [GO:0034644 "cellular response to UV"
evidence=IEA] [GO:0031011 "Ino80 complex" evidence=IEA] [GO:0030307
"positive regulation of cell growth" evidence=IEA] [GO:0016887
"ATPase activity" evidence=IEA] [GO:0010571 "positive regulation of
DNA replication involved in S phase" evidence=IEA] [GO:0006338
"chromatin remodeling" evidence=IEA] [GO:0003678 "DNA helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0000724 "double-strand break repair via homologous
recombination" evidence=IEA] [GO:0000070 "mitotic sister chromatid
segregation" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR020838
Pfam:PF00176 Pfam:PF00271 Pfam:PF13892 PROSITE:PS51194
PROSITE:PS51413 SMART:SM00490 GO:GO:0005524 GO:GO:0030307
GO:GO:0051225 GO:GO:0003677 GO:GO:0045944 GO:GO:0016887
GO:GO:0006338 GO:GO:0000070 GO:GO:0031011 GO:GO:0000724
GO:GO:0034644 GO:GO:0071479 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0003678 GO:GO:0070914 GO:GO:2000045
GO:GO:0010571 KO:K11665 CTD:54617 GeneTree:ENSGT00680000100052
OMA:KVIRKFW EMBL:DAAA02028556 EMBL:DAAA02028557 IPI:IPI00685860
RefSeq:NP_001192313.1 UniGene:Bt.55708 Ensembl:ENSBTAT00000013708
GeneID:505992 KEGG:bta:505992 NextBio:20867400 Uniprot:E1BAN8
Length = 1566
Score = 781 (280.0 bits), Expect = 2.3e-123, Sum P(3) = 2.3e-123
Identities = 146/324 (45%), Positives = 213/324 (65%)
Query: 448 PFLLKFPLREYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTIAMLAHLACEKGIWGPH 507
P + L+ YQ G++WL +YE+ +NGILADEMGLGKT+ +IA+LAHLA + IWGP
Sbjct: 520 PTIFNGKLKGYQLKGMNWLANLYEQGINGILADEMGLGKTVQSIALLAHLAERENIWGPF 579
Query: 508 LIVVPTSVMLNWETEFLKWCPAFKILTYFGSAKERKFKRQGWLKPN------SFHVCITT 561
LI+ P S + NW EF ++ P FK+L Y+G+ +RK R+ W + FHV IT+
Sbjct: 580 LIISPASTLNNWHQEFTRFVPKFKVLPYWGNPHDRKVIRRFWSQKTLYTQDAPFHVVITS 639
Query: 562 YRLIIQDSKVFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPLQNDLME 621
Y+L++QD K F+R KW+Y++LDEA +K+ S RW+ LL F + R+LLTGTP+QN + E
Sbjct: 640 YQLVVQDVKYFQRVKWQYMVLDEAQALKSSSSVRWKILLQFQCRNRLLLTGTPIQNTMAE 699
Query: 622 LWSLMHFLMPHIFQSHQEFKDWFCNPISGMVEGQEKVNKEVVDRLHNVLRPFILRRLKRD 681
LW+L+HF+MP +F SH+EF +WF I E + +++ + RLH +L+PF+LRR+K+D
Sbjct: 700 LWALLHFIMPTLFDSHEEFNEWFSKDIESHAENKSAIDENQLSRLHMILKPFMLRRIKKD 759
Query: 682 VEKQLPMKQEHVIYCRLSKRQRNLY---------EDFIASSETQATLASANFFGMISVIM 732
VE +L K E ++YC+L+ RQ+ LY ED + SS A +++++M
Sbjct: 760 VENELSDKIEILMYCQLTSRQKLLYQALKNKISIEDLLQSSMGSTQQAQTTTSSLMNLVM 819
Query: 733 QLRKVCNHPDLFEGRPIVSSFDMS 756
Q RKVCNHP+LFE + S F +S
Sbjct: 820 QFRKVCNHPELFERQETWSPFHIS 843
Score = 500 (181.1 bits), Expect = 2.3e-123, Sum P(3) = 2.3e-123
Identities = 109/240 (45%), Positives = 148/240 (61%)
Query: 971 LFPIRPAIVRRQVYFPDRRLIQFDCGKLQELAILLRKLKSDGHRALIFTQMTKMLDILEE 1030
L+ IRP + P + + D GKL L +LL +LKS GHR LI++QMT+M+D+LEE
Sbjct: 1086 LWSIRPQNGWSFIRIPGKESLITDSGKLYALDVLLTRLKSQGHRVLIYSQMTRMIDLLEE 1145
Query: 1031 FISLYGYTYMRLDGSTQPEERQTLMQRFNTNPKIFLFILSTRSGGVGINLVGADTVIFYD 1090
++ +TYMRLDGS++ ER+ ++ F T IF+F+LSTR+GG+GINL ADTVIFYD
Sbjct: 1146 YMVYRKHTYMRLDGSSKISERRDMVADFQTRNDIFVFLLSTRAGGLGINLTAADTVIFYD 1205
Query: 1091 SDWNPAMDQQAQDRCHRIGQTREVHIYRLISESTIEENILKKANQKRALDDLVIQSGGYN 1150
SDWNP +DQQA DR HR+GQT++V +YRLI + TIEE IL++A +K + +VI G +
Sbjct: 1206 SDWNPTVDQQAMDRAHRLGQTKQVTVYRLICKGTIEERILQRAKEKSEIQRMVISGGNFK 1265
Query: 1151 TEFFKKLDPMELFSGHRTLPMKTM--QKEKAINNG-NEVSLSNADVE--AALKCVEDEAD 1205
+ K + + L L K Q+EK N V E A K EDE D
Sbjct: 1266 PDTLKPKEVVSLLLDDEELEKKLRLRQEEKRQQEETNRVKERKRKREKYAEKKKKEDELD 1325
Score = 81 (33.6 bits), Expect = 2.3e-123, Sum P(3) = 2.3e-123
Identities = 19/91 (20%), Positives = 45/91 (49%)
Query: 31 KKFWMKIEKLVLYKHQMEVDVRKKKALDKQLEFLLGQTERYSSMLAENLVDSHKPVQQSP 90
K+ + EK L + +++ ++R+ K ++L FL+ QTE Y+ ++ H +Q+
Sbjct: 364 KEHRKRAEKEALEQRKLDEEMREAKRQQRKLNFLITQTELYAHFMSRKRDMGHDGIQEEI 423
Query: 91 MRE-QPGIQYKEADENGAEEPGVQSKEADED 120
+R+ + ++ D G + ++ D +
Sbjct: 424 LRKLEDSSAQRQIDIGGGVVVNITQEDYDSN 454
>DICTYBASE|DDB_G0292358 [details] [associations]
symbol:ino80 "CHR group protein" species:44689
"Dictyostelium discoideum" [GO:0016817 "hydrolase activity, acting
on acid anhydrides" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0031011 "Ino80 complex" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0006338 "chromatin remodeling" evidence=ISS] [GO:0006281 "DNA
repair" evidence=ISS] [GO:0006200 "ATP catabolic process"
evidence=ISS] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271 Pfam:PF13892
PROSITE:PS51194 PROSITE:PS51413 SMART:SM00490
dictyBase:DDB_G0292358 GO:GO:0005524 GenomeReviews:CM000155_GR
GO:GO:0003677 GO:GO:0006281 GO:GO:0016887 GO:GO:0006338
GO:GO:0006366 GO:GO:0031011 GO:GO:0004386 EMBL:AAFI02000189
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
KO:K11665 RefSeq:XP_629681.1 ProteinModelPortal:Q54DG0
STRING:Q54DG0 PRIDE:Q54DG0 EnsemblProtists:DDB0233012
GeneID:8628597 KEGG:ddi:DDB_G0292358 InParanoid:Q54DG0 OMA:MINILED
ProtClustDB:CLSZ2497087 Uniprot:Q54DG0
Length = 2129
Score = 812 (290.9 bits), Expect = 2.8e-123, Sum P(3) = 2.8e-123
Identities = 157/334 (47%), Positives = 220/334 (65%)
Query: 433 PTGITFSTTQVRTKFPFLLKFPLREYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTIA 492
P G FST K P +L L+ YQ G+ W+V +Y++ +NGILADEMGLGKTI +IA
Sbjct: 1143 PPG--FSTADT-LKQPTILNADLKPYQLKGMTWIVNLYDQGINGILADEMGLGKTIQSIA 1199
Query: 493 MLAHLACEKGIWGPHLIVVPTSVMLNWETEFLKWCPAFKILTYFGSAKERKFKRQGWLKP 552
+LAHLA EK IWGP LIV P S + NW+ EF K+ PAFK++ Y+G+ ++R R+ W P
Sbjct: 1200 VLAHLAEEKNIWGPFLIVTPKSTLHNWKNEFAKFVPAFKVIPYWGTQQQRTTIRKYW-NP 1258
Query: 553 ------NS-FHVCITTYRLIIQDSKVFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSK 605
NS FHV IT+Y +I++D K F R +W+Y++LDEAH IK+ S RW+TL++FN +
Sbjct: 1259 KKLYHRNSPFHVLITSYNVIVRDEKYFHRLRWQYMVLDEAHAIKSSASNRWKTLMSFNCR 1318
Query: 606 RRILLTGTPLQNDLMELWSLMHFLMPHIFQSHQEFKDWFCNPISGMVEGQEKVNKEVVDR 665
R+LLTGTP+QN + ELW+L+HF+MP F SH EF +WF I Q +N+ ++R
Sbjct: 1319 NRLLLTGTPIQNSMAELWALLHFIMPTFFDSHDEFAEWFSKDIENHAMSQGGLNEHQLNR 1378
Query: 666 LHNVLRPFILRRLKRDVEKQLPMKQEHVIYCRLSKRQRNLYEDFIASSETQATLASANFF 725
LH +L+PF+LRR+KRDVE ++P K E +YC L+ RQ+ LY+ ++ L A+F
Sbjct: 1379 LHMILKPFMLRRIKRDVENEMPSKTEVEVYCNLTHRQKKLYQSIRSNISITELLGGASFS 1438
Query: 726 ------GMISVIMQLRKVCNHPDLFEGRPIVSSF 753
+++ +MQ RKVCNHP+ F+ S F
Sbjct: 1439 EQGSMKALMNFVMQFRKVCNHPETFKRSECESPF 1472
Score = 472 (171.2 bits), Expect = 2.8e-123, Sum P(3) = 2.8e-123
Identities = 88/158 (55%), Positives = 120/158 (75%)
Query: 994 DCGKLQELAILLRKLKSDGHRALIFTQMTKMLDILEEFISLYGYTYMRLDGSTQPEERQT 1053
D GKLQ L LL+ LK GHR LI++Q TKM++ILE+F+ Y Y+RLDGS++ ++R+
Sbjct: 1765 DSGKLQVLDKLLKDLKVGGHRVLIYSQFTKMINILEDFMIFRKYKYLRLDGSSKLDDRRD 1824
Query: 1054 LMQRFNTNPKIFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQDRCHRIGQTRE 1113
++ F ++P IF F+LSTR+ G+GINL ADTVIFYDSDWNP +D+QAQDR HR+GQTR
Sbjct: 1825 MVDDFQSDPSIFAFLLSTRACGIGINLTSADTVIFYDSDWNPTVDEQAQDRAHRLGQTRP 1884
Query: 1114 VHIYRLISESTIEENILKKANQKRALDDLVIQSGGYNT 1151
V +YRLI+++TIEE ILK+A QK + +VI G + +
Sbjct: 1885 VTVYRLITKNTIEEKILKRAKQKHQIQSIVIAGGKFES 1922
Score = 85 (35.0 bits), Expect = 2.8e-123, Sum P(3) = 2.8e-123
Identities = 26/111 (23%), Positives = 50/111 (45%)
Query: 28 KDVKKFWMKIEKLVLYKHQMEVDVRKKKALDKQLEFLLGQTERYSSMLAENLVDSHK--- 84
KD ++ + EK + + E +V++ K ++L FL+ QTE YS +++ L D
Sbjct: 960 KDEREAKRRAEKEEANQRKREEEVQEAKRQQRKLNFLISQTELYSHFMSKKLDDPSSGDA 1019
Query: 85 -PVQQSPMR---EQPGIQYKEADENGAEEPGVQSKEADEDDAEQHSGFEPQ 131
P + + P Q K+ E ++ S E +E+ ++ E +
Sbjct: 1020 TPATIGSLMNGSQMPTEQNKKIKEKNDQDDNESSSEEEEESSDDEGKTEQE 1070
Score = 38 (18.4 bits), Expect = 2.5e-118, Sum P(3) = 2.5e-118
Identities = 12/52 (23%), Positives = 24/52 (46%)
Query: 59 KQLEFLLGQTERYSS-MLAENLVDSHKPVQQSPMREQPGIQYKEADENGAEE 109
K L+F + + +L+E ++ H+ S + P ++DE+ EE
Sbjct: 629 KNLDFNSNDHSKLDNILLSEKSIERHRNPLSSSISSAPKPLDFDSDEDITEE 680
>MGI|MGI:1915392 [details] [associations]
symbol:Ino80 "INO80 homolog (S. cerevisiae)" species:10090
"Mus musculus" [GO:0000070 "mitotic sister chromatid segregation"
evidence=ISO] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0000724 "double-strand break repair via homologous
recombination" evidence=ISO] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=ISO] [GO:0003678
"DNA helicase activity" evidence=ISO] [GO:0003779 "actin binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005874 "microtubule" evidence=IEA] [GO:0006200
"ATP catabolic process" evidence=ISO] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006302 "double-strand break repair"
evidence=ISO] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0006338 "chromatin remodeling" evidence=ISO] [GO:0006974
"response to DNA damage stimulus" evidence=IEA] [GO:0007049 "cell
cycle" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0010571 "positive regulation of DNA replication involved in S
phase" evidence=ISO] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016817 "hydrolase activity, acting on acid anhydrides"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISO]
[GO:0030307 "positive regulation of cell growth" evidence=ISO]
[GO:0031011 "Ino80 complex" evidence=ISO] [GO:0032508 "DNA duplex
unwinding" evidence=ISO] [GO:0034644 "cellular response to UV"
evidence=ISO] [GO:0043014 "alpha-tubulin binding" evidence=ISO]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0051225 "spindle
assembly" evidence=ISO] [GO:0051301 "cell division" evidence=IEA]
[GO:0070914 "UV-damage excision repair" evidence=ISO] [GO:0071479
"cellular response to ionizing radiation" evidence=ISO] [GO:2000045
"regulation of G1/S transition of mitotic cell cycle" evidence=ISO]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR020838
Pfam:PF00176 Pfam:PF00271 Pfam:PF13892 PROSITE:PS51194
PROSITE:PS51413 SMART:SM00490 MGI:MGI:1915392 GO:GO:0005524
GO:GO:0005634 GO:GO:0030307 GO:GO:0051301 GO:GO:0051225
GO:GO:0003677 GO:GO:0045944 GO:GO:0016887 GO:GO:0006338
GO:GO:0000070 GO:GO:0031011 GO:GO:0000724 GO:GO:0034644
GO:GO:0005874 GO:GO:0071479 HSSP:Q97XQ5 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0003678
GO:GO:0070914 GO:GO:2000045 GO:GO:0010571 EMBL:AL844862 KO:K11665
CTD:54617 GeneTree:ENSGT00680000100052 HOGENOM:HOG000231795
HOVERGEN:HBG057875 OMA:KVIRKFW OrthoDB:EOG4ZKJKF EMBL:AK040612
EMBL:AK129317 EMBL:BC059235 IPI:IPI00378561 IPI:IPI00785415
RefSeq:NP_080850.2 UniGene:Mm.330496 ProteinModelPortal:Q6ZPV2
SMR:Q6ZPV2 IntAct:Q6ZPV2 STRING:Q6ZPV2 PhosphoSite:Q6ZPV2
PaxDb:Q6ZPV2 PRIDE:Q6ZPV2 Ensembl:ENSMUST00000049920
Ensembl:ENSMUST00000110808 GeneID:68142 KEGG:mmu:68142
InParanoid:Q6ZPV2 NextBio:326516 Bgee:Q6ZPV2 Genevestigator:Q6ZPV2
GermOnline:ENSMUSG00000034154 Uniprot:Q6ZPV2
Length = 1559
Score = 777 (278.6 bits), Expect = 4.7e-123, Sum P(3) = 4.7e-123
Identities = 146/324 (45%), Positives = 212/324 (65%)
Query: 448 PFLLKFPLREYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTIAMLAHLACEKGIWGPH 507
P + L+ YQ G++WL +YE+ +NGILADEMGLGKT+ +IA+LAHLA + IWGP
Sbjct: 513 PTIFNGKLKGYQLKGMNWLANLYEQGINGILADEMGLGKTVQSIALLAHLAERENIWGPF 572
Query: 508 LIVVPTSVMLNWETEFLKWCPAFKILTYFGSAKERKFKRQGWLKPN------SFHVCITT 561
LI+ P S + NW EF ++ P FK+L Y+G+ +RK R+ W + FHV IT+
Sbjct: 573 LIISPASTLNNWHQEFTRFVPKFKVLPYWGNPHDRKVIRRFWSQKTLYTQDAPFHVVITS 632
Query: 562 YRLIIQDSKVFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPLQNDLME 621
Y+L++QD K F+R KW+Y++LDEA +K+ S RW+ LL F + R+LLTGTP+QN + E
Sbjct: 633 YQLVVQDVKYFQRVKWQYMVLDEAQALKSSSSVRWKILLQFQCRNRLLLTGTPIQNTMAE 692
Query: 622 LWSLMHFLMPHIFQSHQEFKDWFCNPISGMVEGQEKVNKEVVDRLHNVLRPFILRRLKRD 681
LW+L+HF+MP +F SH+EF +WF I E + +++ + RLH +L+PF+LRR+K+D
Sbjct: 693 LWALLHFIMPTLFDSHEEFNEWFSKDIESHAENKSAIDENQLSRLHMILKPFMLRRIKKD 752
Query: 682 VEKQLPMKQEHVIYCRLSKRQRNLY---------EDFIASSETQATLASANFFGMISVIM 732
VE +L K E + YC+L+ RQ+ LY ED + SS A +++++M
Sbjct: 753 VENELSDKIEILTYCQLTSRQKLLYQALKNKISIEDLLQSSMGSTQQAQNTTSSLMNLVM 812
Query: 733 QLRKVCNHPDLFEGRPIVSSFDMS 756
Q RKVCNHP+LFE + S F +S
Sbjct: 813 QFRKVCNHPELFERQETWSPFHIS 836
Score = 501 (181.4 bits), Expect = 4.7e-123, Sum P(3) = 4.7e-123
Identities = 109/240 (45%), Positives = 147/240 (61%)
Query: 971 LFPIRPAIVRRQVYFPDRRLIQFDCGKLQELAILLRKLKSDGHRALIFTQMTKMLDILEE 1030
L IRP + P + + D GKL L +LL +LKS GHR LI++QMT+M+D+LEE
Sbjct: 1079 LLSIRPQNGWSFIRIPGKESLITDSGKLYALDVLLTRLKSQGHRVLIYSQMTRMIDLLEE 1138
Query: 1031 FISLYGYTYMRLDGSTQPEERQTLMQRFNTNPKIFLFILSTRSGGVGINLVGADTVIFYD 1090
++ +TYMRLDGS++ ER+ ++ F T IF+F+LSTR+GG+GINL ADTVIFYD
Sbjct: 1139 YMVYRKHTYMRLDGSSKISERRDMVADFQTRNDIFVFLLSTRAGGLGINLTAADTVIFYD 1198
Query: 1091 SDWNPAMDQQAQDRCHRIGQTREVHIYRLISESTIEENILKKANQKRALDDLVIQSGGYN 1150
SDWNP +DQQA DR HR+GQT++V +YRLI + TIEE IL++A +K + +VI G +
Sbjct: 1199 SDWNPTVDQQAMDRAHRLGQTKQVTVYRLICKGTIEERILQRAKEKSEIQRMVISGGNFK 1258
Query: 1151 TEFFKKLDPMELFSGHRTLPMKTM--QKEKAINN-GNEVSLSNADVE--AALKCVEDEAD 1205
+ K + + L L K Q+EK N V E A K EDE D
Sbjct: 1259 PDTLKPKEVVSLLLDDEELEKKLRLRQEEKRQQEESNRVKERKRKREKYAEKKKKEDELD 1318
Score = 81 (33.6 bits), Expect = 4.7e-123, Sum P(3) = 4.7e-123
Identities = 19/91 (20%), Positives = 45/91 (49%)
Query: 31 KKFWMKIEKLVLYKHQMEVDVRKKKALDKQLEFLLGQTERYSSMLAENLVDSHKPVQQSP 90
K+ + EK L + +++ ++R+ K ++L FL+ QTE Y+ ++ H +Q+
Sbjct: 357 KEHRKRAEKEALEQRKLDEEMREAKRQQRKLNFLITQTELYAHFMSRKRDMGHDGIQEEI 416
Query: 91 MRE-QPGIQYKEADENGAEEPGVQSKEADED 120
+R+ + ++ D G + ++ D +
Sbjct: 417 LRKLEDSSTQRQIDIGGGVVVNITQEDYDSN 447
>UNIPROTKB|F1SSV0 [details] [associations]
symbol:INO80 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:2000045 "regulation of G1/S transition of mitotic cell
cycle" evidence=IEA] [GO:0071479 "cellular response to ionizing
radiation" evidence=IEA] [GO:0070914 "UV-damage excision repair"
evidence=IEA] [GO:0051225 "spindle assembly" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0043014 "alpha-tubulin
binding" evidence=IEA] [GO:0034644 "cellular response to UV"
evidence=IEA] [GO:0031011 "Ino80 complex" evidence=IEA] [GO:0030307
"positive regulation of cell growth" evidence=IEA] [GO:0016887
"ATPase activity" evidence=IEA] [GO:0010571 "positive regulation of
DNA replication involved in S phase" evidence=IEA] [GO:0006338
"chromatin remodeling" evidence=IEA] [GO:0003678 "DNA helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0000724 "double-strand break repair via homologous
recombination" evidence=IEA] [GO:0000070 "mitotic sister chromatid
segregation" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR020838
Pfam:PF00176 Pfam:PF00271 Pfam:PF13892 PROSITE:PS51194
PROSITE:PS51413 SMART:SM00490 GO:GO:0005524 GO:GO:0030307
GO:GO:0051225 GO:GO:0003677 GO:GO:0045944 GO:GO:0016887
GO:GO:0006338 GO:GO:0000070 GO:GO:0031011 GO:GO:0000724
GO:GO:0034644 GO:GO:0071479 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0003678 GO:GO:0070914 GO:GO:2000045
GO:GO:0010571 KO:K11665 CTD:54617 GeneTree:ENSGT00680000100052
OMA:KVIRKFW EMBL:FP015925 RefSeq:XP_003121636.1 UniGene:Ssc.45003
Ensembl:ENSSSCT00000005252 GeneID:100517567 KEGG:ssc:100517567
Uniprot:F1SSV0
Length = 1566
Score = 781 (280.0 bits), Expect = 5.9e-123, Sum P(3) = 5.9e-123
Identities = 146/324 (45%), Positives = 213/324 (65%)
Query: 448 PFLLKFPLREYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTIAMLAHLACEKGIWGPH 507
P + L+ YQ G++WL +YE+ +NGILADEMGLGKT+ +IA+LAHLA + IWGP
Sbjct: 520 PTIFNGKLKGYQLKGMNWLANLYEQGINGILADEMGLGKTVQSIALLAHLAERENIWGPF 579
Query: 508 LIVVPTSVMLNWETEFLKWCPAFKILTYFGSAKERKFKRQGWLKPN------SFHVCITT 561
LI+ P S + NW EF ++ P FK+L Y+G+ +RK R+ W + FHV IT+
Sbjct: 580 LIISPASTLNNWHQEFTRFVPKFKVLPYWGNPHDRKVIRRFWSQKTLYTQDAPFHVVITS 639
Query: 562 YRLIIQDSKVFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPLQNDLME 621
Y+L++QD K F+R KW+Y++LDEA +K+ S RW+ LL F + R+LLTGTP+QN + E
Sbjct: 640 YQLVVQDVKYFQRVKWQYMVLDEAQALKSSSSVRWKILLQFQCRNRLLLTGTPIQNTMAE 699
Query: 622 LWSLMHFLMPHIFQSHQEFKDWFCNPISGMVEGQEKVNKEVVDRLHNVLRPFILRRLKRD 681
LW+L+HF+MP +F SH+EF +WF I E + +++ + RLH +L+PF+LRR+K+D
Sbjct: 700 LWALLHFIMPTLFDSHEEFNEWFSKDIESHAENKSAIDENQLSRLHMILKPFMLRRIKKD 759
Query: 682 VEKQLPMKQEHVIYCRLSKRQRNLY---------EDFIASSETQATLASANFFGMISVIM 732
VE +L K E ++YC+L+ RQ+ LY ED + SS A +++++M
Sbjct: 760 VENELSDKIEILMYCQLTSRQKLLYQALKNKISIEDLLQSSMGSTQQAQTTTSSLMNLVM 819
Query: 733 QLRKVCNHPDLFEGRPIVSSFDMS 756
Q RKVCNHP+LFE + S F +S
Sbjct: 820 QFRKVCNHPELFERQETWSPFHIS 843
Score = 495 (179.3 bits), Expect = 5.9e-123, Sum P(3) = 5.9e-123
Identities = 108/240 (45%), Positives = 147/240 (61%)
Query: 971 LFPIRPAIVRRQVYFPDRRLIQFDCGKLQELAILLRKLKSDGHRALIFTQMTKMLDILEE 1030
L+ IRP + P + + D GKL L +LL +LKS GHR LI++QMT+M+D+LEE
Sbjct: 1086 LWSIRPQNGWSFIRIPGKESLITDSGKLYALDVLLTRLKSQGHRVLIYSQMTRMIDLLEE 1145
Query: 1031 FISLYGYTYMRLDGSTQPEERQTLMQRFNTNPKIFLFILSTRSGGVGINLVGADTVIFYD 1090
++ +TYMRLDGS++ ER+ ++ F IF+F+LSTR+GG+GINL ADTVIFYD
Sbjct: 1146 YMVYRKHTYMRLDGSSKISERRDMVADFQNRNDIFVFLLSTRAGGLGINLTAADTVIFYD 1205
Query: 1091 SDWNPAMDQQAQDRCHRIGQTREVHIYRLISESTIEENILKKANQKRALDDLVIQSGGYN 1150
SDWNP +DQQA DR HR+GQT++V +YRLI + TIEE IL++A +K + +VI G +
Sbjct: 1206 SDWNPTVDQQAMDRAHRLGQTKQVTVYRLICKGTIEERILQRAKEKSEIQRMVISGGNFK 1265
Query: 1151 TEFFKKLDPMELFSGHRTLPMKTM--QKEKAINNG-NEVSLSNADVE--AALKCVEDEAD 1205
+ K + + L L K Q+EK N V E A K EDE D
Sbjct: 1266 PDTLKPKEVVSLLLDDEELEKKLRLRQEEKRQQEETNRVKERKRKREKYAEKKKKEDELD 1325
Score = 82 (33.9 bits), Expect = 5.9e-123, Sum P(3) = 5.9e-123
Identities = 19/91 (20%), Positives = 45/91 (49%)
Query: 31 KKFWMKIEKLVLYKHQMEVDVRKKKALDKQLEFLLGQTERYSSMLAENLVDSHKPVQQSP 90
K+ + EK L + +++ ++R+ K ++L FL+ QTE Y+ ++ H +Q+
Sbjct: 364 KEHRKRAEKEALEQRKLDEEMREAKRQQRKLNFLITQTELYAHFMSRKRDMGHDGIQEEI 423
Query: 91 MRE-QPGIQYKEADENGAEEPGVQSKEADED 120
+R+ + ++ D G + ++ D +
Sbjct: 424 LRKLEDSSMQRQIDIGGGVVVNITQEDYDSN 454
Score = 38 (18.4 bits), Expect = 2.5e-118, Sum P(3) = 2.5e-118
Identities = 8/24 (33%), Positives = 15/24 (62%)
Query: 102 ADENG-AEEPGVQSKEADEDDAEQ 124
+DE+ A+ ++E +EDD E+
Sbjct: 132 SDESSEADSQSEDNEEEEEDDEEE 155
>UNIPROTKB|F1PKX5 [details] [associations]
symbol:INO80 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:2000045 "regulation of G1/S transition of
mitotic cell cycle" evidence=IEA] [GO:0071479 "cellular response to
ionizing radiation" evidence=IEA] [GO:0070914 "UV-damage excision
repair" evidence=IEA] [GO:0051225 "spindle assembly" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0043014 "alpha-tubulin
binding" evidence=IEA] [GO:0034644 "cellular response to UV"
evidence=IEA] [GO:0031011 "Ino80 complex" evidence=IEA] [GO:0030307
"positive regulation of cell growth" evidence=IEA] [GO:0016887
"ATPase activity" evidence=IEA] [GO:0010571 "positive regulation of
DNA replication involved in S phase" evidence=IEA] [GO:0006338
"chromatin remodeling" evidence=IEA] [GO:0003678 "DNA helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0000724 "double-strand break repair via homologous
recombination" evidence=IEA] [GO:0000070 "mitotic sister chromatid
segregation" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR020838
Pfam:PF00176 Pfam:PF00271 Pfam:PF13892 PROSITE:PS51194
PROSITE:PS51413 SMART:SM00490 GO:GO:0005524 GO:GO:0030307
GO:GO:0051225 GO:GO:0003677 GO:GO:0045944 GO:GO:0016887
GO:GO:0006338 GO:GO:0000070 GO:GO:0031011 GO:GO:0000724
GO:GO:0034644 GO:GO:0071479 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0003678 GO:GO:0070914 GO:GO:2000045
GO:GO:0010571 KO:K11665 CTD:54617 GeneTree:ENSGT00680000100052
OMA:KVIRKFW EMBL:AAEX03016071 RefSeq:XP_849183.1
Ensembl:ENSCAFT00000015097 GeneID:478262 KEGG:cfa:478262
Uniprot:F1PKX5
Length = 1560
Score = 781 (280.0 bits), Expect = 7.3e-123, Sum P(3) = 7.3e-123
Identities = 146/324 (45%), Positives = 213/324 (65%)
Query: 448 PFLLKFPLREYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTIAMLAHLACEKGIWGPH 507
P + L+ YQ G++WL +YE+ +NGILADEMGLGKT+ +IA+LAHLA + IWGP
Sbjct: 514 PTIFNGKLKGYQLKGMNWLANLYEQGINGILADEMGLGKTVQSIALLAHLAERENIWGPF 573
Query: 508 LIVVPTSVMLNWETEFLKWCPAFKILTYFGSAKERKFKRQGWLKPN------SFHVCITT 561
LI+ P S + NW EF ++ P FK+L Y+G+ +RK R+ W + FHV IT+
Sbjct: 574 LIISPASTLNNWHQEFTRFVPKFKVLPYWGNPHDRKVIRRFWSQKTLYTQDAPFHVVITS 633
Query: 562 YRLIIQDSKVFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPLQNDLME 621
Y+L++QD K F+R KW+Y++LDEA +K+ S RW+ LL F + R+LLTGTP+QN + E
Sbjct: 634 YQLVVQDVKYFQRVKWQYMVLDEAQALKSSSSVRWKILLQFQCRNRLLLTGTPIQNTMAE 693
Query: 622 LWSLMHFLMPHIFQSHQEFKDWFCNPISGMVEGQEKVNKEVVDRLHNVLRPFILRRLKRD 681
LW+L+HF+MP +F SH+EF +WF I E + +++ + RLH +L+PF+LRR+K+D
Sbjct: 694 LWALLHFIMPTLFDSHEEFNEWFSKDIESHAENKSAIDENQLSRLHMILKPFMLRRIKKD 753
Query: 682 VEKQLPMKQEHVIYCRLSKRQRNLY---------EDFIASSETQATLASANFFGMISVIM 732
VE +L K E ++YC+L+ RQ+ LY ED + SS A +++++M
Sbjct: 754 VENELSDKIEILMYCQLTSRQKLLYQALKNKISIEDLLQSSMGSTQQAQTTTSSLMNLVM 813
Query: 733 QLRKVCNHPDLFEGRPIVSSFDMS 756
Q RKVCNHP+LFE + S F +S
Sbjct: 814 QFRKVCNHPELFERQETWSPFHIS 837
Score = 495 (179.3 bits), Expect = 7.3e-123, Sum P(3) = 7.3e-123
Identities = 108/240 (45%), Positives = 147/240 (61%)
Query: 971 LFPIRPAIVRRQVYFPDRRLIQFDCGKLQELAILLRKLKSDGHRALIFTQMTKMLDILEE 1030
L+ IRP + P + + D GKL L +LL +LKS GHR LI++QMT+M+D+LEE
Sbjct: 1080 LWSIRPQNGWSFIRIPGKESLITDSGKLYALDVLLTRLKSQGHRVLIYSQMTRMIDLLEE 1139
Query: 1031 FISLYGYTYMRLDGSTQPEERQTLMQRFNTNPKIFLFILSTRSGGVGINLVGADTVIFYD 1090
++ +TYMRLDGS++ ER+ ++ F IF+F+LSTR+GG+GINL ADTVIFYD
Sbjct: 1140 YMVYRKHTYMRLDGSSKISERRDMVADFQNRNDIFVFLLSTRAGGLGINLTAADTVIFYD 1199
Query: 1091 SDWNPAMDQQAQDRCHRIGQTREVHIYRLISESTIEENILKKANQKRALDDLVIQSGGYN 1150
SDWNP +DQQA DR HR+GQT++V +YRLI + TIEE IL++A +K + +VI G +
Sbjct: 1200 SDWNPTVDQQAMDRAHRLGQTKQVTVYRLICKGTIEERILQRAKEKSEIQRMVISGGNFK 1259
Query: 1151 TEFFKKLDPMELFSGHRTLPMKTM--QKEKAINNG-NEVSLSNADVE--AALKCVEDEAD 1205
+ K + + L L K Q+EK N V E A K EDE D
Sbjct: 1260 PDTLKPKEVVSLLLDDEELEKKLRLRQEEKRQQEETNRVKERKRKREKYAEKKKKEDELD 1319
Score = 81 (33.6 bits), Expect = 7.3e-123, Sum P(3) = 7.3e-123
Identities = 19/91 (20%), Positives = 45/91 (49%)
Query: 31 KKFWMKIEKLVLYKHQMEVDVRKKKALDKQLEFLLGQTERYSSMLAENLVDSHKPVQQSP 90
K+ + EK L + +++ ++R+ K ++L FL+ QTE Y+ ++ H +Q+
Sbjct: 358 KEHRKRAEKEALEQRKLDEEMREAKRQQRKLNFLITQTELYAHFMSRKRDMGHDGIQEEI 417
Query: 91 MRE-QPGIQYKEADENGAEEPGVQSKEADED 120
+R+ + ++ D G + ++ D +
Sbjct: 418 LRKLEDSSTQRQIDIGGGVVVNITQEDYDSN 448
>ZFIN|ZDB-GENE-041014-72 [details] [associations]
symbol:ino80 "INO80 homolog (S. cerevisiae)"
species:7955 "Danio rerio" [GO:0016817 "hydrolase activity, acting
on acid anhydrides" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271 Pfam:PF13892
PROSITE:PS51194 PROSITE:PS51413 SMART:SM00490
ZFIN:ZDB-GENE-041014-72 GO:GO:0005524 GO:GO:0003677 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:BX897725
HOGENOM:HOG000231795 HOVERGEN:HBG057875 OMA:KVIRKFW IPI:IPI00516098
UniGene:Dr.84310 ProteinModelPortal:Q5RGG8 STRING:Q5RGG8
InParanoid:Q5RGG8 Uniprot:Q5RGG8
Length = 1582
Score = 798 (286.0 bits), Expect = 9.3e-123, Sum P(4) = 9.3e-123
Identities = 152/324 (46%), Positives = 217/324 (66%)
Query: 448 PFLLKFPLREYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTIAMLAHLACEKGIWGPH 507
P + L+ YQ G++WL +YE+ +NGILADEMGLGKT+ +IA+LAHLA + IWGP
Sbjct: 512 PTIFNGKLKGYQLKGMNWLANLYEQGINGILADEMGLGKTVQSIALLAHLAERENIWGPF 571
Query: 508 LIVVPTSVMLNWETEFLKWCPAFKILTYFGSAKERKFKRQGWLKP-----NS-FHVCITT 561
LI+ P S + NW EF ++ P FK+L Y+G+ +RK R+ W + N+ FHV IT+
Sbjct: 572 LIISPASTLNNWHQEFSRFVPKFKVLPYWGNPHDRKVIRKFWSQKTLYTQNAPFHVVITS 631
Query: 562 YRLIIQDSKVFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPLQNDLME 621
Y+L++QD K F+R KW+Y++LDEA +K+ S RW+ LL F + R+LLTGTP+QN + E
Sbjct: 632 YQLVVQDVKYFQRVKWQYMVLDEAQALKSSTSVRWKILLQFQCRNRLLLTGTPIQNTMAE 691
Query: 622 LWSLMHFLMPHIFQSHQEFKDWFCNPISGMVEGQEKVNKEVVDRLHNVLRPFILRRLKRD 681
LW+L+HF+MP +F SH+EF +WF I E + +++ + RLH +L+PF+LRR+K+D
Sbjct: 692 LWALLHFIMPTLFDSHEEFNEWFSKDIESHAENKSAIDENQLSRLHMILKPFMLRRIKKD 751
Query: 682 VEKQLPMKQEHVIYCRLSKRQRNLY---------EDFIASSETQATLASANFFGMISVIM 732
VE +L K E + YC+L+ RQR LY ED + SS A A + +++++M
Sbjct: 752 VENELSDKIEILTYCQLTSRQRLLYQALKNKISIEDLLQSSMGSAQQAHSTTSSLMNLVM 811
Query: 733 QLRKVCNHPDLFEGRPIVSSFDMS 756
Q RKVCNHPDLFE + I S F MS
Sbjct: 812 QFRKVCNHPDLFERQEIRSPFHMS 835
Score = 496 (179.7 bits), Expect = 9.3e-123, Sum P(4) = 9.3e-123
Identities = 96/198 (48%), Positives = 135/198 (68%)
Query: 983 VYFPDRRLIQFDCGKLQELAILLRKLKSDGHRALIFTQMTKMLDILEEFISLYGYTYMRL 1042
+ PD+ + D GKL L +LL +LKS GHR LI++QMT+M+D+LEE++ +TYMRL
Sbjct: 1119 IRIPDKESLITDSGKLHTLDLLLTRLKSQGHRVLIYSQMTRMIDLLEEYMVYRKHTYMRL 1178
Query: 1043 DGSTQPEERQTLMQRFNTNPKIFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQ 1102
DGS++ ER+ ++ F + IF+F+LSTR+GG+GINL ADTVIFYDSDWNP +DQQA
Sbjct: 1179 DGSSKISERRDMVADFQSRTDIFVFLLSTRAGGLGINLTAADTVIFYDSDWNPTVDQQAM 1238
Query: 1103 DRCHRIGQTREVHIYRLISESTIEENILKKANQKRALDDLVIQSGGYNTEFFKKLDPMEL 1162
DR HR+GQT++V +YRLI + TIEE IL++A +K + +VI G + + K + + L
Sbjct: 1239 DRAHRLGQTKQVTVYRLICKGTIEERILQRAKEKSEIQRMVISGGNFKPDTLKPKEVVSL 1298
Query: 1163 FSGHRTLPMKTM--QKEK 1178
L K Q+EK
Sbjct: 1299 LLDDEELEKKLRLRQEEK 1316
Score = 73 (30.8 bits), Expect = 9.3e-123, Sum P(4) = 9.3e-123
Identities = 20/91 (21%), Positives = 42/91 (46%)
Query: 31 KKFWMKIEKLVLYKHQMEVDVRKKKALDKQLEFLLGQTERYSSMLAENLVDSHKPVQQSP 90
K+ + EK L + +++ ++R+ K ++L FL+ QTE Y+ + Q+
Sbjct: 356 KEHRKRAEKEALEQRKLDEEMREAKRQQRKLNFLITQTELYAHFMGGKQNAGGDCTQEEI 415
Query: 91 MRE-QPGIQYKEADENGAEEPGVQSKEADED 120
+R+ + ++ D G V ++ D D
Sbjct: 416 LRKLEDNSSQRQIDIGGGVMVNVSQEDYDSD 446
Score = 39 (18.8 bits), Expect = 6.5e-75, Sum P(4) = 6.5e-75
Identities = 9/28 (32%), Positives = 15/28 (53%)
Query: 1584 RDCVPS-PDVWL----PQEDAILCAVVH 1606
R C P+ P +L P++D ++C H
Sbjct: 1008 RQCQPTQPPKFLLAVTPRKDRVVCVCAH 1035
Score = 37 (18.1 bits), Expect = 9.3e-123, Sum P(4) = 9.3e-123
Identities = 8/21 (38%), Positives = 13/21 (61%)
Query: 200 SAEMGEDEAEPTVVEEGHVQG 220
S + GED +PT+ G ++G
Sbjct: 502 SIQAGEDIPQPTIFN-GKLKG 521
>UNIPROTKB|F1NYY9 [details] [associations]
symbol:INO80 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0006338
"chromatin remodeling" evidence=IEA] [GO:0010571 "positive
regulation of DNA replication involved in S phase" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0030307 "positive
regulation of cell growth" evidence=IEA] [GO:0031011 "Ino80
complex" evidence=IEA] [GO:0034644 "cellular response to UV"
evidence=IEA] [GO:0043014 "alpha-tubulin binding" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0051225 "spindle
assembly" evidence=IEA] [GO:0070914 "UV-damage excision repair"
evidence=IEA] [GO:0071479 "cellular response to ionizing radiation"
evidence=IEA] [GO:2000045 "regulation of G1/S transition of mitotic
cell cycle" evidence=IEA] [GO:0000070 "mitotic sister chromatid
segregation" evidence=IEA] [GO:0000724 "double-strand break repair
via homologous recombination" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0003678 "DNA helicase activity"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271 Pfam:PF13892
PROSITE:PS51194 PROSITE:PS51413 SMART:SM00490 GO:GO:0005524
GO:GO:0030307 GO:GO:0051225 GO:GO:0003677 GO:GO:0045944
GO:GO:0016887 GO:GO:0006338 GO:GO:0000070 GO:GO:0031011
GO:GO:0000724 GO:GO:0034644 GO:GO:0071479 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0003678 GO:GO:0070914
GO:GO:2000045 GO:GO:0010571 GeneTree:ENSGT00680000100052
OMA:KVIRKFW EMBL:AADN02033529 EMBL:AADN02033530 IPI:IPI00604387
Ensembl:ENSGALT00000013933 Uniprot:F1NYY9
Length = 1564
Score = 771 (276.5 bits), Expect = 1.1e-122, Sum P(3) = 1.1e-122
Identities = 144/324 (44%), Positives = 212/324 (65%)
Query: 448 PFLLKFPLREYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTIAMLAHLACEKGIWGPH 507
P + L+ YQ G++WL +YE+ +NGILADEMGLGKT+ +IA+LAHLA + IWGP
Sbjct: 516 PTIFNGKLKGYQLKGMNWLANLYEQGINGILADEMGLGKTVQSIALLAHLAERENIWGPF 575
Query: 508 LIVVPTSVMLNWETEFLKWCPAFKILTYFGSAKERKFKRQGWLKPN------SFHVCITT 561
LI+ P S + NW EF ++ P FK+L Y+G+ +RK R+ W + FHV IT+
Sbjct: 576 LIISPASTLNNWHQEFARFVPKFKVLPYWGNPHDRKVIRKFWSQKTLYTQDAPFHVVITS 635
Query: 562 YRLIIQDSKVFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPLQNDLME 621
Y+L++QD K F+R KW+Y++LDEA +K+ S RW+ LL F + R+LLTGTP+QN + E
Sbjct: 636 YQLVVQDVKYFQRVKWQYMVLDEAQALKSSSSVRWKILLQFQCRNRLLLTGTPIQNTMAE 695
Query: 622 LWSLMHFLMPHIFQSHQEFKDWFCNPISGMVEGQEKVNKEVVDRLHNVLRPFILRRLKRD 681
LW+L+HF+MP +F SH+EF +WF I E + +++ + RLH +L+PF+LRR+K+D
Sbjct: 696 LWALLHFIMPTLFDSHEEFNEWFSKDIESHAENKSAIDENQLSRLHMILKPFMLRRIKKD 755
Query: 682 VEKQLPMKQEHVIYCRLSKRQRNLYE---------DFIASSETQATLASANFFGMISVIM 732
VE +L K E ++YC+ + RQ+ LY+ D + SS A +++++M
Sbjct: 756 VENELSDKIEILMYCQQTSRQKLLYQALKNKISIDDLLQSSMGTTQQAQTTTSSLMNLVM 815
Query: 733 QLRKVCNHPDLFEGRPIVSSFDMS 756
Q RKVCNHP+LFE + S F +S
Sbjct: 816 QFRKVCNHPELFERQETWSPFHIS 839
Score = 504 (182.5 bits), Expect = 1.1e-122, Sum P(3) = 1.1e-122
Identities = 104/236 (44%), Positives = 149/236 (63%)
Query: 946 CSKSGASVFLQPTYKEKCSEVLSPL---LFPIRPAIVRRQVYFPDRRLIQFDCGKLQELA 1002
C SGA L ++++ S+ L IRP + PD+ + D GKL L
Sbjct: 1057 CLVSGAPE-LAADWQKQSSQFFPEYPGGLLGIRPQNGWSFIRIPDKESLITDSGKLHALD 1115
Query: 1003 ILLRKLKSDGHRALIFTQMTKMLDILEEFISLYGYTYMRLDGSTQPEERQTLMQRFNTNP 1062
+LL +LKS GHR LI++QMT+M+D+LEE++ +TYMRLDGS++ ER+ ++ F
Sbjct: 1116 LLLTRLKSQGHRVLIYSQMTRMIDLLEEYMVYRKHTYMRLDGSSKISERRDMVADFQNRN 1175
Query: 1063 KIFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQDRCHRIGQTREVHIYRLISE 1122
IF+F+LSTR+GG+GINL ADTVIFYDSDWNP +DQQA DR HR+GQT++V +YRLI +
Sbjct: 1176 DIFVFLLSTRAGGLGINLTAADTVIFYDSDWNPTVDQQAMDRAHRLGQTKQVTVYRLICK 1235
Query: 1123 STIEENILKKANQKRALDDLVIQSGGYNTEFFKKLDPMELFSGHRTLPMKTMQKEK 1178
TIEE IL++A +K + +VI G + + K + + L L K Q+++
Sbjct: 1236 GTIEERILQRAKEKSEIQRMVISGGNFKPDTLKPKEVVSLLLDDEELEKKLRQRQE 1291
Score = 81 (33.6 bits), Expect = 1.1e-122, Sum P(3) = 1.1e-122
Identities = 19/91 (20%), Positives = 45/91 (49%)
Query: 31 KKFWMKIEKLVLYKHQMEVDVRKKKALDKQLEFLLGQTERYSSMLAENLVDSHKPVQQSP 90
K+ + EK L + +++ ++R+ K ++L FL+ QTE Y+ ++ H +Q+
Sbjct: 360 KEHRKRAEKEALEQRKLDEEMREAKRQQRKLNFLITQTELYAHFMSRKRDIGHDGIQEEI 419
Query: 91 MRE-QPGIQYKEADENGAEEPGVQSKEADED 120
+R+ + ++ D G + ++ D +
Sbjct: 420 LRKLEDSSTQRQIDIGGGVVVNITQEDYDSN 450
>UNIPROTKB|Q9ULG1 [details] [associations]
symbol:INO80 "DNA helicase INO80" species:9606 "Homo
sapiens" [GO:0003779 "actin binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0003678 "DNA helicase
activity" evidence=IDA] [GO:0003677 "DNA binding" evidence=IDA]
[GO:0016887 "ATPase activity" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0006338 "chromatin remodeling" evidence=IDA]
[GO:0031011 "Ino80 complex" evidence=IDA] [GO:0034644 "cellular
response to UV" evidence=IMP] [GO:0000724 "double-strand break
repair via homologous recombination" evidence=IMP] [GO:0070914
"UV-damage excision repair" evidence=IMP] [GO:0071479 "cellular
response to ionizing radiation" evidence=IMP] [GO:0006302
"double-strand break repair" evidence=IMP] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0030307 "positive regulation of cell growth"
evidence=IMP] [GO:2000045 "regulation of G1/S transition of mitotic
cell cycle" evidence=IMP] [GO:0010571 "positive regulation of DNA
replication involved in S phase" evidence=IMP] [GO:0043014
"alpha-tubulin binding" evidence=IMP] [GO:0051225 "spindle
assembly" evidence=IMP] [GO:0000070 "mitotic sister chromatid
segregation" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0006200 "ATP catabolic process" evidence=IDA]
[GO:0032508 "DNA duplex unwinding" evidence=IDA] InterPro:IPR000330
InterPro:IPR001650 InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271
Pfam:PF13892 PROSITE:PS51194 PROSITE:PS51413 SMART:SM00490
GO:GO:0005524 GO:GO:0030307 GO:GO:0051301 GO:GO:0051225
GO:GO:0003677 GO:GO:0045944 GO:GO:0016887 GO:GO:0006338
GO:GO:0000070 GO:GO:0031011 GO:GO:0000724 GO:GO:0034644
GO:GO:0005874 GO:GO:0071479 HSSP:Q97XQ5 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0043014
GO:GO:0003678 GO:GO:0070914 GO:GO:2000045 EMBL:CH471125
GO:GO:0010571 KO:K11665 CTD:54617 ChiTaRS:INO80 EMBL:AB033085
EMBL:BC146785 EMBL:AL137280 IPI:IPI00008091 PIR:T46350
RefSeq:NP_060023.1 UniGene:Hs.292949 ProteinModelPortal:Q9ULG1
SMR:Q9ULG1 DIP:DIP-34296N IntAct:Q9ULG1 STRING:Q9ULG1
PhosphoSite:Q9ULG1 DMDM:114149322 PaxDb:Q9ULG1 PRIDE:Q9ULG1
Ensembl:ENST00000361937 Ensembl:ENST00000401393 GeneID:54617
KEGG:hsa:54617 UCSC:uc001zni.3 GeneCards:GC15M041271
HGNC:HGNC:26956 MIM:610169 neXtProt:NX_Q9ULG1 PharmGKB:PA162392040
HOGENOM:HOG000231795 HOVERGEN:HBG057875 InParanoid:Q9ULG1
OMA:KVIRKFW OrthoDB:EOG4ZKJKF GenomeRNAi:54617 NextBio:57137
ArrayExpress:Q9ULG1 Bgee:Q9ULG1 CleanEx:HS_INO80
Genevestigator:Q9ULG1 GermOnline:ENSG00000128908 Uniprot:Q9ULG1
Length = 1556
Score = 779 (279.3 bits), Expect = 3.6e-122, Sum P(4) = 3.6e-122
Identities = 146/324 (45%), Positives = 213/324 (65%)
Query: 448 PFLLKFPLREYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTIAMLAHLACEKGIWGPH 507
P + L+ YQ G++WL +YE+ +NGILADEMGLGKT+ +IA+LAHLA + IWGP
Sbjct: 511 PTIFNGKLKGYQLKGMNWLANLYEQGINGILADEMGLGKTVQSIALLAHLAERENIWGPF 570
Query: 508 LIVVPTSVMLNWETEFLKWCPAFKILTYFGSAKERKFKRQGWLKPN------SFHVCITT 561
LI+ P S + NW EF ++ P FK+L Y+G+ +RK R+ W + FHV IT+
Sbjct: 571 LIISPASTLNNWHQEFTRFVPKFKVLPYWGNPHDRKVIRRFWSQKTLYTQDAPFHVVITS 630
Query: 562 YRLIIQDSKVFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPLQNDLME 621
Y+L++QD K F+R KW+Y++LDEA +K+ S RW+ LL F + R+LLTGTP+QN + E
Sbjct: 631 YQLVVQDVKYFQRVKWQYMVLDEAQALKSSSSVRWKILLQFQCRNRLLLTGTPIQNTMAE 690
Query: 622 LWSLMHFLMPHIFQSHQEFKDWFCNPISGMVEGQEKVNKEVVDRLHNVLRPFILRRLKRD 681
LW+L+HF+MP +F SH+EF +WF I E + +++ + RLH +L+PF+LRR+K+D
Sbjct: 691 LWALLHFIMPTLFDSHEEFNEWFSKDIESHAENKSAIDENQLSRLHMILKPFMLRRIKKD 750
Query: 682 VEKQLPMKQEHVIYCRLSKRQRNLY---------EDFIASSETQATLASANFFGMISVIM 732
VE +L K E ++YC+L+ RQ+ LY ED + SS A +++++M
Sbjct: 751 VENELSDKIEILMYCQLTSRQKLLYQALKNKISIEDLLQSSMGSTQQAQNTTSSLMNLVM 810
Query: 733 QLRKVCNHPDLFEGRPIVSSFDMS 756
Q RKVCNHP+LFE + S F +S
Sbjct: 811 QFRKVCNHPELFERQETWSPFHIS 834
Score = 495 (179.3 bits), Expect = 3.6e-122, Sum P(4) = 3.6e-122
Identities = 108/240 (45%), Positives = 147/240 (61%)
Query: 971 LFPIRPAIVRRQVYFPDRRLIQFDCGKLQELAILLRKLKSDGHRALIFTQMTKMLDILEE 1030
L+ IRP + P + + D GKL L +LL +LKS GHR LI++QMT+M+D+LEE
Sbjct: 1076 LWSIRPQNGWSFIRIPGKESLITDSGKLYALDVLLTRLKSQGHRVLIYSQMTRMIDLLEE 1135
Query: 1031 FISLYGYTYMRLDGSTQPEERQTLMQRFNTNPKIFLFILSTRSGGVGINLVGADTVIFYD 1090
++ +TYMRLDGS++ ER+ ++ F IF+F+LSTR+GG+GINL ADTVIFYD
Sbjct: 1136 YMVYRKHTYMRLDGSSKISERRDMVADFQNRNDIFVFLLSTRAGGLGINLTAADTVIFYD 1195
Query: 1091 SDWNPAMDQQAQDRCHRIGQTREVHIYRLISESTIEENILKKANQKRALDDLVIQSGGYN 1150
SDWNP +DQQA DR HR+GQT++V +YRLI + TIEE IL++A +K + +VI G +
Sbjct: 1196 SDWNPTVDQQAMDRAHRLGQTKQVTVYRLICKGTIEERILQRAKEKSEIQRMVISGGNFK 1255
Query: 1151 TEFFKKLDPMELFSGHRTLPMKTM--QKEKAINNG-NEVSLSNADVE--AALKCVEDEAD 1205
+ K + + L L K Q+EK N V E A K EDE D
Sbjct: 1256 PDTLKPKEVVSLLLDDEELEKKLRLRQEEKRQQEETNRVKERKRKREKYAEKKKKEDELD 1315
Score = 81 (33.6 bits), Expect = 3.6e-122, Sum P(4) = 3.6e-122
Identities = 19/91 (20%), Positives = 45/91 (49%)
Query: 31 KKFWMKIEKLVLYKHQMEVDVRKKKALDKQLEFLLGQTERYSSMLAENLVDSHKPVQQSP 90
K+ + EK L + +++ ++R+ K ++L FL+ QTE Y+ ++ H +Q+
Sbjct: 355 KEHRKRAEKEALEQRKLDEEMREAKRQQRKLNFLITQTELYAHFMSRKRDMGHDGIQEEI 414
Query: 91 MRE-QPGIQYKEADENGAEEPGVQSKEADED 120
+R+ + ++ D G + ++ D +
Sbjct: 415 LRKLEDSSTQRQIDIGGGVVVNITQEDYDSN 445
Score = 44 (20.5 bits), Expect = 3.6e-122, Sum P(4) = 3.6e-122
Identities = 16/50 (32%), Positives = 23/50 (46%)
Query: 1516 SPDSDSKLSRKRHDGSTELKTCES---IFIDLEQKSASRSKM-GGKISIT 1561
SP S+ +S + H GS L S + +D SA +S+ SIT
Sbjct: 1355 SPFSEISISSELHTGSIPLDESSSDMLVIVDDPASSAPQSRATNSPASIT 1404
Score = 37 (18.1 bits), Expect = 5.4e-43, Sum P(4) = 5.4e-43
Identities = 20/87 (22%), Positives = 39/87 (44%)
Query: 611 TGTPLQNDLMELWSLMHFLMPHIFQSHQEFKDWFCN--P--ISGMV--EGQEKVNKEVVD 664
T + L N +M+ + + P +F+ + + + + P IS + GQ +V D
Sbjct: 801 TTSSLMNLVMQFRKVCNH--PELFERQETWSPFHISLKPYHISKFIYRHGQIRVFNHSRD 858
Query: 665 RLHNVLRPFILRRLKRDVEKQLPMKQE 691
R VL PF ++R + + + +E
Sbjct: 859 RWLRVLSPFAPDYIQRSLFHRKGINEE 885
>UNIPROTKB|E2QWV6 [details] [associations]
symbol:EP400 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001005
InterPro:IPR001650 Pfam:PF00176 PROSITE:PS51194 SMART:SM00717
GO:GO:0005524 GO:GO:0003677 GO:GO:0003682 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR017877
PROSITE:PS50090 InterPro:IPR013999 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 SMART:SM00573 PROSITE:PS51204
GeneTree:ENSGT00530000063427 EMBL:AAEX03014584 EMBL:AAEX03014585
EMBL:AAEX03014586 Ensembl:ENSCAFT00000010370 Uniprot:E2QWV6
Length = 3002
Score = 757 (271.5 bits), Expect = 2.4e-120, Sum P(7) = 2.4e-120
Identities = 146/321 (45%), Positives = 197/321 (61%)
Query: 433 PTGITFSTTQVRTKFPFLLKFPLREYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTIA 492
P G + V+ P LL LR+YQ IGLDWL +Y K LNGILADE GLGKT+ IA
Sbjct: 1026 PKGSARVSPTVKLTAPSLLYGVLRDYQKIGLDWLAKLYRKNLNGILADEAGLGKTVQIIA 1085
Query: 493 MLAHLACEKGIWGPHLIVVPTSVMLNWETEFLKWCPAFKILTYFGSAKERKFKRQGWLKP 552
AHLAC +G WGPHL+VV +L WE E +WCP K L Y GS +E K KRQ W +P
Sbjct: 1086 FFAHLACNEGNWGPHLVVVRGCNILKWELELKRWCPGLKTLLYVGSHRELKAKRQEWTEP 1145
Query: 553 NSFHVCITTYRLIIQDSKVFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTG 612
NSF+VCI Y+ + F R +W+ L++DE ++ + W+ + S++R+LL
Sbjct: 1146 NSFNVCIAPYKQFFRGYASFMRVRWRCLVIDEMQRVRGMTERHWEAVFTLRSQQRLLLID 1205
Query: 613 TPLQNDLMELWSLMHFLMPHIFQSHQEFKDWFCNPISGMVEGQEKVNKEVVDRLHNVLRP 672
PL N +ELW+++HFL+P I + + P+ + + +VV RLH V +P
Sbjct: 1206 APLHNTFLELWTMVHFLIPGISRPYLHL------PLKAPNDENQDYYHKVVIRLHRVTQP 1259
Query: 673 FILRRLKRDVEKQLPMKQEHVIYCRLSKRQRNLYEDFIASSETQATLASANFFGMISVIM 732
FILRR KRDVEKQL K EHV+ CRLS RQ+ LYED I TQ L S +F ++S+++
Sbjct: 1260 FILRRTKRDVEKQLTKKYEHVLKCRLSSRQKALYEDVILQPGTQEALKSGHFVDVLSILL 1319
Query: 733 QLRKVCNHPDLFEGRPIVSSF 753
+L+++CNHP L E R SS+
Sbjct: 1320 RLQRICNHPGLVEPRLPESSY 1340
Score = 506 (183.2 bits), Expect = 2.4e-120, Sum P(7) = 2.4e-120
Identities = 116/319 (36%), Positives = 179/319 (56%)
Query: 856 QDRASSVAWWNSLRCQKKPVYSTSLRELLTV----KHP---VCDILQQKTVRRSYLYSSK 908
++R + + N RC + P+Y L + +V + P D QQK + Y+S
Sbjct: 1620 RERLDQIYFVNERRCSRAPMYGRDLLRICSVVGREQTPWPGASDSSQQKGTGPASSYTSP 1679
Query: 909 L---ADIVLSPVERFQRMIGLVESFMFAIPAARAPAPVCWCSKSGASVFLQPTYKEKC-S 964
D++L+ +R + +++ + IP A P W ++ + + C
Sbjct: 1680 SNGQKDLILTLTQRQACLQDIIDRVVCVIPPVVAAPPSLWVARPPSLYSHRMRILRHCLK 1739
Query: 965 EVLSPLLFPIRPAIVRRQVYFPDRRLIQFDCGKLQELAILLRKLKSDGHRALIFTQMTKM 1024
E ++P ++ R + FP+ RL+QFD GKL+ LAILL+KLKS+G R LI +QM M
Sbjct: 1740 EHIAPYAQQLQRMTALRSLRFPELRLVQFDSGKLEALAILLQKLKSEGRRVLILSQMVLM 1799
Query: 1025 LDILEEFISLYGYTYMRLDGSTQPEERQTLMQRFNTNPKIFLFILSTRSGGVGINLVGAD 1084
LDILE F++ + TY+R+D + E+RQ LM+ FN + +IF ILST S G++LV AD
Sbjct: 1800 LDILEMFLNFHYLTYIRIDENANSEQRQELMRSFNRDRRIFCAILSTHSRATGVSLVEAD 1859
Query: 1085 TVIFYDSDWNPAMDQQAQDRCHRIGQTREVHIYRLISESTIEENILKKANQKRALDDLVI 1144
V+FYD+D NP MD +AQ+ C RIG+ ++VHIYRL+S ++IEE +LK K + ++
Sbjct: 1860 AVVFYDNDLNPVMDAKAQEWCERIGRRKDVHIYRLVSGNSIEEKLLKNGT-KDLIREVAA 1918
Query: 1145 QSGGYNTEFFKKLDPMELF 1163
Q Y+ F + ELF
Sbjct: 1919 QGNDYSMAFLTQRTIQELF 1937
Score = 85 (35.0 bits), Expect = 2.4e-120, Sum P(7) = 2.4e-120
Identities = 26/98 (26%), Positives = 51/98 (52%)
Query: 22 VAVNISKDVKKFWMKIEKLVLYKHQMEVDVRKKKALDKQLEFLLGQTERYSSMLAENLVD 81
+A + +++++ FW IE++V K Q+E++ ++KKAL Q G+ R + A L +
Sbjct: 826 IAASTAREIECFWSNIEQVVEIKLQVELEEKRKKALTLQKVPRRGKESRPKGLDA--LPE 883
Query: 82 SHKPVQQSPMREQPGIQYKEADENGAEEPGVQSKEADE 119
+ S + + + DE EE ++ +EA+E
Sbjct: 884 AFLESGLSGRKRKASTSLTD-DEVEDEEETIEEEEANE 920
Score = 74 (31.1 bits), Expect = 2.4e-120, Sum P(7) = 2.4e-120
Identities = 19/52 (36%), Positives = 28/52 (53%)
Query: 1302 EAISSFENQLRPIDRYAIRFLELWD-PIIDKTAVESE--VKFEEREWELDRI 1350
E ++ F QL PI++YA+ +LEL+ P + SE V REWE +
Sbjct: 2017 EELADFMEQLTPIEKYALNYLELFHTPTGPEKEGSSEDAVLTAVREWEAQNV 2068
Score = 49 (22.3 bits), Expect = 1.3e-116, Sum P(7) = 1.3e-116
Identities = 15/48 (31%), Positives = 22/48 (45%)
Query: 182 PLQELLKRYAVDKVGRESSAEMGEDEAEPTVVEEGHVQGNGNDLLAGS 229
PLQ L++ +D E E E+E E + V Q L+AG+
Sbjct: 408 PLQAYLRQNDLDLEEEEEEEEEEEEEEEKSEVINDEQQALTGALVAGA 455
Score = 48 (22.0 bits), Expect = 2.4e-120, Sum P(7) = 2.4e-120
Identities = 12/29 (41%), Positives = 16/29 (55%)
Query: 1601 LCAVVHEYGPNWSLVSDILYGMTASGYYR 1629
L V + PNW LVSD++ + S YR
Sbjct: 2257 LTIVSPAHTPNWDLVSDVVN--SCSRIYR 2283
Score = 43 (20.2 bits), Expect = 2.4e-120, Sum P(7) = 2.4e-120
Identities = 8/20 (40%), Positives = 15/20 (75%)
Query: 322 EIALLQKESEIPVEELLARY 341
E++ L KE+E+P+ +L+ Y
Sbjct: 928 ELSNLAKEAELPLIDLMKLY 947
Score = 39 (18.8 bits), Expect = 2.4e-120, Sum P(7) = 2.4e-120
Identities = 6/20 (30%), Positives = 12/20 (60%)
Query: 1910 SEIQHSSPEPVSNQSVATKD 1929
+++ H+ P V + + AT D
Sbjct: 2539 AQVVHTQPRAVGSPATATSD 2558
Score = 37 (18.1 bits), Expect = 2.3e-115, Sum P(7) = 2.3e-115
Identities = 8/14 (57%), Positives = 9/14 (64%)
Query: 217 HVQGNGNDLLAGSK 230
H+QGN D LA K
Sbjct: 390 HLQGNMMDFLAFKK 403
>UNIPROTKB|L7N089 [details] [associations]
symbol:EP400 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] GeneTree:ENSGT00530000063427 EMBL:AAEX03014584
Ensembl:ENSCAFT00000010365 Uniprot:L7N089
Length = 3110
Score = 757 (271.5 bits), Expect = 3.5e-120, Sum P(7) = 3.5e-120
Identities = 146/321 (45%), Positives = 197/321 (61%)
Query: 433 PTGITFSTTQVRTKFPFLLKFPLREYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTIA 492
P G + V+ P LL LR+YQ IGLDWL +Y K LNGILADE GLGKT+ IA
Sbjct: 1062 PKGSARVSPTVKLTAPSLLYGVLRDYQKIGLDWLAKLYRKNLNGILADEAGLGKTVQIIA 1121
Query: 493 MLAHLACEKGIWGPHLIVVPTSVMLNWETEFLKWCPAFKILTYFGSAKERKFKRQGWLKP 552
AHLAC +G WGPHL+VV +L WE E +WCP K L Y GS +E K KRQ W +P
Sbjct: 1122 FFAHLACNEGNWGPHLVVVRGCNILKWELELKRWCPGLKTLLYVGSHRELKAKRQEWTEP 1181
Query: 553 NSFHVCITTYRLIIQDSKVFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTG 612
NSF+VCI Y+ + F R +W+ L++DE ++ + W+ + S++R+LL
Sbjct: 1182 NSFNVCIAPYKQFFRGYASFMRVRWRCLVIDEMQRVRGMTERHWEAVFTLRSQQRLLLID 1241
Query: 613 TPLQNDLMELWSLMHFLMPHIFQSHQEFKDWFCNPISGMVEGQEKVNKEVVDRLHNVLRP 672
PL N +ELW+++HFL+P I + + P+ + + +VV RLH V +P
Sbjct: 1242 APLHNTFLELWTMVHFLIPGISRPYLHL------PLKAPNDENQDYYHKVVIRLHRVTQP 1295
Query: 673 FILRRLKRDVEKQLPMKQEHVIYCRLSKRQRNLYEDFIASSETQATLASANFFGMISVIM 732
FILRR KRDVEKQL K EHV+ CRLS RQ+ LYED I TQ L S +F ++S+++
Sbjct: 1296 FILRRTKRDVEKQLTKKYEHVLKCRLSSRQKALYEDVILQPGTQEALKSGHFVDVLSILL 1355
Query: 733 QLRKVCNHPDLFEGRPIVSSF 753
+L+++CNHP L E R SS+
Sbjct: 1356 RLQRICNHPGLVEPRLPESSY 1376
Score = 506 (183.2 bits), Expect = 3.5e-120, Sum P(7) = 3.5e-120
Identities = 116/319 (36%), Positives = 179/319 (56%)
Query: 856 QDRASSVAWWNSLRCQKKPVYSTSLRELLTV----KHP---VCDILQQKTVRRSYLYSSK 908
++R + + N RC + P+Y L + +V + P D QQK + Y+S
Sbjct: 1729 RERLDQIYFVNERRCSRAPMYGRDLLRICSVVGREQTPWPGASDSSQQKGTGPASSYTSP 1788
Query: 909 L---ADIVLSPVERFQRMIGLVESFMFAIPAARAPAPVCWCSKSGASVFLQPTYKEKC-S 964
D++L+ +R + +++ + IP A P W ++ + + C
Sbjct: 1789 SNGQKDLILTLTQRQACLQDIIDRVVCVIPPVVAAPPSLWVARPPSLYSHRMRILRHCLK 1848
Query: 965 EVLSPLLFPIRPAIVRRQVYFPDRRLIQFDCGKLQELAILLRKLKSDGHRALIFTQMTKM 1024
E ++P ++ R + FP+ RL+QFD GKL+ LAILL+KLKS+G R LI +QM M
Sbjct: 1849 EHIAPYAQQLQRMTALRSLRFPELRLVQFDSGKLEALAILLQKLKSEGRRVLILSQMVLM 1908
Query: 1025 LDILEEFISLYGYTYMRLDGSTQPEERQTLMQRFNTNPKIFLFILSTRSGGVGINLVGAD 1084
LDILE F++ + TY+R+D + E+RQ LM+ FN + +IF ILST S G++LV AD
Sbjct: 1909 LDILEMFLNFHYLTYIRIDENANSEQRQELMRSFNRDRRIFCAILSTHSRATGVSLVEAD 1968
Query: 1085 TVIFYDSDWNPAMDQQAQDRCHRIGQTREVHIYRLISESTIEENILKKANQKRALDDLVI 1144
V+FYD+D NP MD +AQ+ C RIG+ ++VHIYRL+S ++IEE +LK K + ++
Sbjct: 1969 AVVFYDNDLNPVMDAKAQEWCERIGRRKDVHIYRLVSGNSIEEKLLKNGT-KDLIREVAA 2027
Query: 1145 QSGGYNTEFFKKLDPMELF 1163
Q Y+ F + ELF
Sbjct: 2028 QGNDYSMAFLTQRTIQELF 2046
Score = 85 (35.0 bits), Expect = 3.5e-120, Sum P(7) = 3.5e-120
Identities = 26/98 (26%), Positives = 51/98 (52%)
Query: 22 VAVNISKDVKKFWMKIEKLVLYKHQMEVDVRKKKALDKQLEFLLGQTERYSSMLAENLVD 81
+A + +++++ FW IE++V K Q+E++ ++KKAL Q G+ R + A L +
Sbjct: 862 IAASTAREIECFWSNIEQVVEIKLQVELEEKRKKALTLQKVPRRGKESRPKGLDA--LPE 919
Query: 82 SHKPVQQSPMREQPGIQYKEADENGAEEPGVQSKEADE 119
+ S + + + DE EE ++ +EA+E
Sbjct: 920 AFLESGLSGRKRKASTSLTD-DEVEDEEETIEEEEANE 956
Score = 74 (31.1 bits), Expect = 3.5e-120, Sum P(7) = 3.5e-120
Identities = 19/52 (36%), Positives = 28/52 (53%)
Query: 1302 EAISSFENQLRPIDRYAIRFLELWD-PIIDKTAVESE--VKFEEREWELDRI 1350
E ++ F QL PI++YA+ +LEL+ P + SE V REWE +
Sbjct: 2126 EELADFMEQLTPIEKYALNYLELFHTPTGPEKEGSSEDAVLTAVREWEAQNV 2177
Score = 48 (22.0 bits), Expect = 3.5e-120, Sum P(7) = 3.5e-120
Identities = 12/29 (41%), Positives = 16/29 (55%)
Query: 1601 LCAVVHEYGPNWSLVSDILYGMTASGYYR 1629
L V + PNW LVSD++ + S YR
Sbjct: 2366 LTIVSPAHTPNWDLVSDVVN--SCSRIYR 2392
Score = 43 (20.2 bits), Expect = 3.5e-120, Sum P(7) = 3.5e-120
Identities = 8/20 (40%), Positives = 15/20 (75%)
Query: 322 EIALLQKESEIPVEELLARY 341
E++ L KE+E+P+ +L+ Y
Sbjct: 964 ELSNLAKEAELPLIDLMKLY 983
Score = 43 (20.2 bits), Expect = 8.1e-116, Sum P(7) = 8.1e-116
Identities = 12/40 (30%), Positives = 19/40 (47%)
Query: 182 PLQELLKRYAVDKVGRESSAEMGEDEAEPTVVEEGHVQGN 221
PLQ L++ +D E E E+E E + V V+ +
Sbjct: 408 PLQAYLRQNDLDLEEEEEEEEEEEEEEEKSEVINDEVRNS 447
Score = 39 (18.8 bits), Expect = 3.5e-120, Sum P(7) = 3.5e-120
Identities = 6/20 (30%), Positives = 12/20 (60%)
Query: 1910 SEIQHSSPEPVSNQSVATKD 1929
+++ H+ P V + + AT D
Sbjct: 2647 AQVVHTQPRAVGSPATATSD 2666
Score = 37 (18.1 bits), Expect = 3.4e-115, Sum P(7) = 3.4e-115
Identities = 8/14 (57%), Positives = 9/14 (64%)
Query: 217 HVQGNGNDLLAGSK 230
H+QGN D LA K
Sbjct: 390 HLQGNMMDFLAFKK 403
>CGD|CAL0000831 [details] [associations]
symbol:orf19.1734 species:5476 "Candida albicans" [GO:0031011
"Ino80 complex" evidence=IEA] [GO:0042766 "nucleosome mobilization"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0043486
"histone exchange" evidence=IEA] [GO:0006348 "chromatin silencing
at telomere" evidence=IEA] [GO:0006366 "transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0016584 "nucleosome
positioning" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0043618 "regulation of transcription from RNA polymerase II
promoter in response to stress" evidence=IEA] [GO:0043140
"ATP-dependent 3'-5' DNA helicase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] InterPro:IPR000330
InterPro:IPR001650 InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271
Pfam:PF13892 PROSITE:PS51194 PROSITE:PS51413 SMART:SM00490
CGD:CAL0000831 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0003677 GO:GO:0006281 GO:GO:0006351 GO:GO:0016568
GO:GO:0004386 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 EMBL:AACQ01000298 EMBL:AACQ01000297
RefSeq:XP_710247.1 RefSeq:XP_710254.1 STRING:Q59KI4 GeneID:3648140
GeneID:3648148 KEGG:cal:CaO19.1734 KEGG:cal:CaO19.9302 KO:K11665
Uniprot:Q59KI4
Length = 1387
Score = 780 (279.6 bits), Expect = 1.3e-119, Sum P(3) = 1.3e-119
Identities = 148/320 (46%), Positives = 214/320 (66%)
Query: 448 PFLLKFPLREYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTIAMLAHLACEKGIWGPH 507
P +LK L+EYQ GL+WL +YE+ +NGILADEMGLGKT+ +I++LA+LA +WGP
Sbjct: 665 PNMLKCTLKEYQLKGLNWLANLYEQGINGILADEMGLGKTVQSISVLAYLAETYNMWGPF 724
Query: 508 LIVVPTSVMLNWETEFLKWCPAFKILTYFGSAKERKFKRQGW----L---KPNSFHVCIT 560
L+V P S + NW+ E K+ P FK+L Y+G+AK+RK R+ W L K + FHV +T
Sbjct: 725 LVVTPASTLHNWQQEITKFVPEFKVLPYWGNAKDRKILRKFWDRKSLRYDKDSPFHVLVT 784
Query: 561 TYRLIIQDSKVFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPLQNDLM 620
+Y+LI+ D F++ KW+Y+ILDEA IK+ S RW++LLN + R+LLTGTP+QN +
Sbjct: 785 SYQLIVADIAYFQKMKWQYMILDEAQAIKSSSSSRWKSLLNLTCRNRLLLTGTPIQNSMQ 844
Query: 621 ELWSLMHFLMPHIFQSHQEFKDWFCNPISGMVEGQEKVNKEVVDRLHNVLRPFILRRLKR 680
ELW+L+HF+MP IF SH EF DWF I + ++++ + RLH +L+PF+LRR+K+
Sbjct: 845 ELWALLHFIMPSIFDSHDEFSDWFAKDIESHAQSNTSLDEQQLRRLHMILKPFMLRRIKK 904
Query: 681 DVEKQLPMKQEHVIYCRLSKRQRNLYEDF---IASSETQATLASANFFG----MISVIMQ 733
+V+ +L K E +YC L+ RQ+ LY+ I+ S+T +N + +++MQ
Sbjct: 905 NVQSELGDKVEIDVYCDLTTRQKKLYQQLRSQISMSDTDLLELESNSTSSDSSLANLVMQ 964
Query: 734 LRKVCNHPDLFEGRPIVSSF 753
RKVCNHPDLFE + S F
Sbjct: 965 FRKVCNHPDLFERADVNSPF 984
Score = 452 (164.2 bits), Expect = 1.3e-119, Sum P(3) = 1.3e-119
Identities = 82/151 (54%), Positives = 115/151 (76%)
Query: 994 DCGKLQELAILLRKLKSDGHRALIFTQMTKMLDILEEFISLYGYTYMRLDGSTQPEERQT 1053
+ GKL +L LL LK GHR LI+ QMT+M+ I EE+++ Y Y+RLDGST E R+
Sbjct: 1234 ESGKLAKLDELLIDLKRGGHRILIYFQMTRMMQIFEEYLAYKSYKYIRLDGSTTIESRRE 1293
Query: 1054 LMQRFNTNPKIFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQDRCHRIGQTRE 1113
++Q + TNP+IF+F+LSTR+GG+G+NL ADTVIFYDSDWNP +D QA DR HRIGQT++
Sbjct: 1294 MVQAWQTNPEIFIFMLSTRAGGLGLNLTSADTVIFYDSDWNPTIDSQAMDRAHRIGQTKQ 1353
Query: 1114 VHIYRLISESTIEENILKKANQKRALDDLVI 1144
V ++RL++ +TIE+ IL++A +K + LV+
Sbjct: 1354 VKVFRLVTRNTIEQKILERAKEKEEIQKLVV 1384
Score = 89 (36.4 bits), Expect = 1.3e-119, Sum P(3) = 1.3e-119
Identities = 28/101 (27%), Positives = 50/101 (49%)
Query: 26 ISKDVKKFWMKIEKLVLYKHQMEVDVRKKKALDKQLEFLLGQTERYSSMLAENL-VDSHK 84
+ +D+KK K EK +L K + E + R+ K ++L FL+ QTE YS + + + D +
Sbjct: 511 LERDLKK---KHEKELLDKAKKEEEEREAKRQSRKLNFLITQTELYSHFIGKKIKTDELE 567
Query: 85 PVQQSPMREQPGIQY--KEADENGAEEPGVQSKEADEDDAE 123
+ ++ K AD +G+ + + + D DD E
Sbjct: 568 GTNADDNLKSNTKEHLDKYADVDGSATHDINAVDFDNDDEE 608
Score = 44 (20.5 bits), Expect = 7.0e-115, Sum P(3) = 7.0e-115
Identities = 20/83 (24%), Positives = 38/83 (45%)
Query: 53 KKKALDKQLEFLLGQTERYSSMLAENLVDSHKPVQQSPMREQPGIQYK-EADENGAEEPG 111
K+KA + +LE ++ SS K Q+S R+ ++ + + +E +
Sbjct: 338 KRKAFEDELE----TADKQSS------TQQVKKSQESTGRDHKRVKIENKQEEQQQHQQQ 387
Query: 112 VQSKEADEDDAEQHSGFEPQLDA 134
Q+ E DE +AE + +P+ A
Sbjct: 388 QQADEEDEAEAEAEAEQKPKSGA 410
Score = 38 (18.4 bits), Expect = 4.2e-76, Sum P(3) = 4.2e-76
Identities = 9/23 (39%), Positives = 14/23 (60%)
Query: 1820 VYGSDLETSVNKSTRENHHLKDS 1842
+Y L + NKSTR++ + K S
Sbjct: 1020 IYDELLTPNYNKSTRDSIYSKFS 1042
>FB|FBgn0086613 [details] [associations]
symbol:Ino80 "Ino80" species:7227 "Drosophila melanogaster"
[GO:0004386 "helicase activity" evidence=ISS] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0031011 "Ino80 complex" evidence=IDA] [GO:0005700 "polytene
chromosome" evidence=IDA] [GO:0000975 "regulatory region DNA
binding" evidence=IDA] [GO:0010468 "regulation of gene expression"
evidence=IMP] [GO:0000790 "nuclear chromatin" evidence=IDA]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR020838
Pfam:PF00176 Pfam:PF00271 Pfam:PF13892 PROSITE:PS51194
PROSITE:PS51413 SMART:SM00490 EMBL:AE014297 GO:GO:0005524
GO:GO:0006355 GO:GO:0006281 GO:GO:0006351 GO:GO:0016887
GO:GO:0006338 GO:GO:0031011 GO:GO:0006310 GO:GO:0005700
GO:GO:0010468 HSSP:Q97XQ5 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0003678 GO:GO:0000975 KO:K11665
EMBL:AY069786 RefSeq:NP_732413.1 UniGene:Dm.33518
ProteinModelPortal:Q9VDY1 SMR:Q9VDY1 IntAct:Q9VDY1 STRING:Q9VDY1
PaxDb:Q9VDY1 EnsemblMetazoa:FBtr0083771 GeneID:42314
KEGG:dme:Dmel_CG31212 UCSC:CG31212-RA CTD:54617 FlyBase:FBgn0086613
GeneTree:ENSGT00680000100052 InParanoid:Q9VDY1 OMA:NTMAEVR
OrthoDB:EOG4SQVBH PhylomeDB:Q9VDY1 ChiTaRS:INO80 GenomeRNAi:42314
NextBio:828189 Bgee:Q9VDY1 Uniprot:Q9VDY1
Length = 1638
Score = 770 (276.1 bits), Expect = 4.0e-117, Sum P(4) = 4.0e-117
Identities = 145/324 (44%), Positives = 215/324 (66%)
Query: 448 PFLLKFPLREYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTIAMLAHLACEKGIWGPH 507
P + K L+ YQ G+ WL +Y++ ++GILADEMGLGKT+ +IA L H+A G+WGP
Sbjct: 528 PKMFKGTLKGYQIKGMTWLANIYDQGISGILADEMGLGKTVQSIAFLCHIAEHYGVWGPF 587
Query: 508 LIVVPTSVMLNWETEFLKWCPAFKILTYFGSAKERKFKRQGW------LKPNSFHVCITT 561
L++ P S + NW+ E ++ P FK++ Y+GS ERK RQ W + SFHV IT+
Sbjct: 588 LVISPASTLHNWQQEMSRFVPDFKVVPYWGSPAERKILRQFWDQKHLHTRDASFHVVITS 647
Query: 562 YRLIIQDSKVFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPLQNDLME 621
Y+L++ D K F R KW+Y++LDEA IK+ SQRW+ LL F+ + R+LL+GTP+QN + E
Sbjct: 648 YQLVVSDYKYFNRIKWQYMVLDEAQAIKSAASQRWKLLLGFSCRNRLLLSGTPIQNSMAE 707
Query: 622 LWSLMHFLMPHIFQSHQEFKDWFCNPISGMVEGQEKVNKEVVDRLHNVLRPFILRRLKRD 681
LW+L+HF+MP +F SH EF +WF I E + ++++ + RLH +L+PF+LRR+K+D
Sbjct: 708 LWALLHFIMPTLFDSHDEFNEWFSKDIESHAENKTGIDEKQISRLHMILKPFMLRRIKKD 767
Query: 682 VEKQLPMKQEHVIYCRLSKRQRNLY---------EDFI-ASSETQATLASANFFGMISVI 731
VE +L K E ++YC L+ RQ+ LY ED + +S + T +S++ +++++
Sbjct: 768 VENELSDKIEIMVYCPLTIRQKLLYRALKQKIRIEDLLHLTSGSTTTSSSSSASNLMNLV 827
Query: 732 MQLRKVCNHPDLFEGRPIVSSFDM 755
MQ RKVCNHP+LFE R S F M
Sbjct: 828 MQFRKVCNHPELFERRDARSPFFM 851
Score = 487 (176.5 bits), Expect = 4.0e-117, Sum P(4) = 4.0e-117
Identities = 94/196 (47%), Positives = 133/196 (67%)
Query: 983 VYFPDRRLIQFDCGKLQELAILLRKLKSDGHRALIFTQMTKMLDILEEFISLYGYTYMRL 1042
+ PD+ + D GKL L LL +LK++GHR LI++QMTKM+D+LEE++ + YMRL
Sbjct: 1143 IVVPDKETLITDAGKLFVLDNLLTRLKANGHRVLIYSQMTKMIDLLEEYMWHRKHRYMRL 1202
Query: 1043 DGSTQPEERQTLMQRFNTNPKIFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQ 1102
DGS++ R+ ++ F T IF+F+LSTR+GG+GINL ADTVIFYDSDWNP +DQQA
Sbjct: 1203 DGSSKISARRDMVADFQTRADIFVFLLSTRAGGLGINLTAADTVIFYDSDWNPTVDQQAM 1262
Query: 1103 DRCHRIGQTREVHIYRLISESTIEENILKKANQKRALDDLVIQSGGYNTEFFKKLDPMEL 1162
DR HR+GQT++V +YRLI + TIEE IL++A +K + +VI G + + K + + L
Sbjct: 1263 DRAHRLGQTKQVTVYRLICKGTIEERILQRAREKSEIQRMVISGGNFKPDTLKPKEVVSL 1322
Query: 1163 FSGHRTLPMKTMQKEK 1178
+ MK Q+ K
Sbjct: 1323 LLDDEEIEMKYRQEAK 1338
Score = 58 (25.5 bits), Expect = 4.0e-117, Sum P(4) = 4.0e-117
Identities = 20/87 (22%), Positives = 42/87 (48%)
Query: 36 KIEKLVLYKHQMEVDVRKKKALDKQLEFLLGQTERYSSMLAENLVDSHKPVQQ---SPMR 92
K E+ + + +V++ + K ++L FL+ QTE Y+ +++ L + Q S +
Sbjct: 393 KQEREAEEQRKQDVELIEVKRQQRKLNFLITQTELYAHFMSKKLGQGSEEDQLRILSQLD 452
Query: 93 EQPGIQYKEADENGAEEPGVQSKEADE 119
E+ + D+ A E + ++E E
Sbjct: 453 EETNARLAAQDDYDAGEMKLLAQENAE 479
Score = 39 (18.8 bits), Expect = 4.0e-117, Sum P(4) = 4.0e-117
Identities = 7/17 (41%), Positives = 12/17 (70%)
Query: 1908 EHSEIQHSSPEPVSNQS 1924
+ +++Q SSP P + QS
Sbjct: 1335 QEAKLQSSSPIPAATQS 1351
>ASPGD|ASPL0000047400 [details] [associations]
symbol:AN2285 species:162425 "Emericella nidulans"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0031011 "Ino80 complex" evidence=IEA] [GO:0043140
"ATP-dependent 3'-5' DNA helicase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0042766 "nucleosome
mobilization" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0043486 "histone exchange" evidence=IEA] [GO:0006348 "chromatin
silencing at telomere" evidence=IEA] [GO:0006366 "transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0016584
"nucleosome positioning" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0043618 "regulation of transcription from RNA
polymerase II promoter in response to stress" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR020838
Pfam:PF00176 Pfam:PF00271 Pfam:PF13892 PROSITE:PS51194
PROSITE:PS51413 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0006355 GO:GO:0003677 EMBL:BN001307 GO:GO:0006281
GO:GO:0006351 GO:GO:0016568 GO:GO:0004386 EMBL:AACD01000038
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
KO:K11665 RefSeq:XP_659889.1 ProteinModelPortal:Q5BAZ5
STRING:Q5BAZ5 EnsemblFungi:CADANIAT00008977 GeneID:2874790
KEGG:ani:AN2285.2 HOGENOM:HOG000048482 OMA:LYFQMTR
OrthoDB:EOG41G6C8 Uniprot:Q5BAZ5
Length = 1612
Score = 767 (275.1 bits), Expect = 6.4e-116, Sum P(4) = 6.4e-116
Identities = 143/322 (44%), Positives = 218/322 (67%)
Query: 448 PFLLKFPLREYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTIAMLAHLACEKGIWGPH 507
P +L L+EYQ GL+WLV +YE+ +NGILADEMGLGKTI +I+++A+LA IWGP
Sbjct: 791 PTMLTAKLKEYQLKGLNWLVNLYEQGINGILADEMGLGKTIQSISVMAYLAEVHNIWGPF 850
Query: 508 LIVVPTSVMLNWETEFLKWCPAFKILTYFGSAKERKFKRQGW-------LKPNSFHVCIT 560
L++ P S + NW+ E K+ P K+L Y+G+AK+RK R+ W K + FHV +T
Sbjct: 851 LVIAPASTLHNWQQEITKFVPNIKVLPYWGNAKDRKILRKFWDRKHITYTKESEFHVLVT 910
Query: 561 TYRLIIQDSKVFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPLQNDLM 620
+Y+L++ D++ F++ KW+Y+ILDEA IK+ +S RW++LL F+ + R+LLTGTP+QN++
Sbjct: 911 SYQLVVLDAQYFQKVKWQYMILDEAQAIKSSQSSRWKSLLGFHCRNRLLLTGTPIQNNMQ 970
Query: 621 ELWSLMHFLMPHIFQSHQEFKDWFCNPISGMVEGQEKVNKEVVDRLHNVLRPFILRRLKR 680
ELW+L+HF+MP +F SH EF +WF I + K+N++ + RLH +L+PF+LRR+K+
Sbjct: 971 ELWALLHFIMPTLFDSHDEFSEWFSKDIESHAQSNTKLNEDQLRRLHMILKPFMLRRVKK 1030
Query: 681 DVEKQLPMKQEHVIYCRLSKRQRNLYEDF-----IASSETQATLAS-ANFFGMISVIMQL 734
V+++L K E ++C L+ RQR LY + I +A + + +++++MQ
Sbjct: 1031 HVQQELGDKVEKDVFCDLTYRQRALYTNLRNRVSIMDLIEKAAVGDETDSTTLMNLVMQF 1090
Query: 735 RKVCNHPDLFEGRPIVSSFDMS 756
RKVCNHPDLFE S F ++
Sbjct: 1091 RKVCNHPDLFERAETKSPFSLA 1112
Score = 477 (173.0 bits), Expect = 6.4e-116, Sum P(4) = 6.4e-116
Identities = 97/183 (53%), Positives = 127/183 (69%)
Query: 967 LSPLL-FPIRPAIVRRQVYFPDRRLIQFDCGKLQELAILLRKLKSDGHRALIFTQMTKML 1025
L P+L PI + P R D GKL +L LLR+LK+ GHR L++ QMT+M+
Sbjct: 1291 LPPMLPEPISTKGRYTHIEVPSMRRFVTDSGKLAKLDELLRELKAGGHRVLLYFQMTRMI 1350
Query: 1026 DILEEFISLYGYTYMRLDGSTQPEERQTLMQRFNTNPKIFLFILSTRSGGVGINLVGADT 1085
D++EE+++ Y Y RLDGST+ E+R+ + F P IF+F+LSTR+GG+GINL ADT
Sbjct: 1351 DLMEEYLTYRNYKYCRLDGSTKLEDRRDTVADFQQRPDIFVFLLSTRAGGLGINLTAADT 1410
Query: 1086 VIFYDSDWNPAMDQQAQDRCHRIGQTREVHIYRLISESTIEENILKKANQKRALDDLVIQ 1145
VIFYDSDWNP +D QA DR HR+GQTR+V +YRLI+ STIEE I K+A QK + +VI
Sbjct: 1411 VIFYDSDWNPTIDSQAMDRAHRLGQTRQVTVYRLITRSTIEERIRKRALQKEEVQRVVI- 1469
Query: 1146 SGG 1148
SGG
Sbjct: 1470 SGG 1472
Score = 51 (23.0 bits), Expect = 6.4e-116, Sum P(4) = 6.4e-116
Identities = 13/52 (25%), Positives = 27/52 (51%)
Query: 28 KDVKKFWMKIEKLVLYKHQMEVDVRKKKALDKQLEFLLGQTERYSSMLAENL 79
+D+++ K E + + E + ++K ++L FL+ QTE YS + +
Sbjct: 645 RDLRRLAEKQELESAKRAEAEREANRQK---RKLNFLISQTELYSHFIGRKI 693
Score = 47 (21.6 bits), Expect = 6.4e-116, Sum P(4) = 6.4e-116
Identities = 9/32 (28%), Positives = 18/32 (56%)
Query: 1457 MSIDDDFYDEDATFSDAMSPPSTSQKKRKKAE 1488
+++DD +++ + F DA + PS + AE
Sbjct: 1535 VTLDDMYHEGEGNFDDASAKPSGAATPVSTAE 1566
Score = 37 (18.1 bits), Expect = 6.6e-70, Sum P(3) = 6.6e-70
Identities = 8/21 (38%), Positives = 12/21 (57%)
Query: 1527 RHDGSTELKTCESIFIDLEQK 1547
R DGST+L+ D +Q+
Sbjct: 1366 RLDGSTKLEDRRDTVADFQQR 1386
>SGD|S000003118 [details] [associations]
symbol:INO80 "ATPase and nucleosome spacing factor"
species:4932 "Saccharomyces cerevisiae" [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0006974 "response to DNA damage
stimulus" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA;IMP;IDA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0042766 "nucleosome mobilization" evidence=IMP] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IMP] [GO:0043486 "histone exchange"
evidence=IDA] [GO:0043140 "ATP-dependent 3'-5' DNA helicase
activity" evidence=IDA] [GO:0016817 "hydrolase activity, acting on
acid anhydrides" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=IDA] [GO:0016887 "ATPase activity" evidence=IDA]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=IMP;IDA] [GO:0006348 "chromatin silencing at telomere"
evidence=IMP] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0043618 "regulation of transcription from RNA polymerase II
promoter in response to stress" evidence=IMP] [GO:0016584
"nucleosome positioning" evidence=IDA] [GO:0031011 "Ino80 complex"
evidence=IDA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271 Pfam:PF13892
PROSITE:PS51194 PROSITE:PS51413 SMART:SM00490 SGD:S000003118
GO:GO:0005524 EMBL:BK006941 GO:GO:0003677 GO:GO:0006281
GO:GO:0045944 GO:GO:0016887 GO:GO:0006366 GO:GO:0031011
GO:GO:0006348 GO:GO:0004386 GO:GO:0043486 GO:GO:0042766 EMBL:Z48618
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
EMBL:X99960 GO:GO:0016584 GO:GO:0043618 KO:K11665
GeneTree:ENSGT00680000100052 HOGENOM:HOG000048482 OrthoDB:EOG41G6C8
EMBL:Z72672 PIR:S60416 RefSeq:NP_011365.1 ProteinModelPortal:P53115
SMR:P53115 DIP:DIP-1386N IntAct:P53115 MINT:MINT-388693
STRING:P53115 PaxDb:P53115 PeptideAtlas:P53115 EnsemblFungi:YGL150C
GeneID:852728 KEGG:sce:YGL150C CYGD:YGL150c OMA:DEFSDWF
NextBio:972117 Genevestigator:P53115 GermOnline:YGL150C
Uniprot:P53115
Length = 1489
Score = 763 (273.6 bits), Expect = 1.1e-115, Sum P(4) = 1.1e-115
Identities = 149/340 (43%), Positives = 221/340 (65%)
Query: 439 STTQVRTKFPFLLKFPLREYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTIAMLAHLA 498
S ++ + P +L L+EYQ GL+WL +Y++ +NGILADEMGLGKT+ +I++LAHLA
Sbjct: 690 SLGEITIEQPKILACTLKEYQLKGLNWLANLYDQGINGILADEMGLGKTVQSISVLAHLA 749
Query: 499 CEKGIWGPHLIVVPTSVMLNWETEFLKWCPAFKILTYFGSAKERKFKRQGWLKPN----- 553
IWGP L+V P S + NW E K+ P FKIL Y+G+A +RK R+ W + N
Sbjct: 750 ENHNIWGPFLVVTPASTLHNWVNEISKFLPQFKILPYWGNANDRKVLRKFWDRKNLRYNK 809
Query: 554 --SFHVCITTYRLIIQDSKVFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLT 611
FHV +T+Y++++ D+ ++ KW+Y+ILDEA IK+ +S RW+ LL+F+ + R+LLT
Sbjct: 810 NAPFHVMVTSYQMVVTDANYLQKMKWQYMILDEAQAIKSSQSSRWKNLLSFHCRNRLLLT 869
Query: 612 GTPLQNDLMELWSLMHFLMPHIFQSHQEFKDWFCNPISGMVEGQEKVNKEVVDRLHNVLR 671
GTP+QN + ELW+L+HF+MP +F SH EF +WF I E K+N++ + RLH +L+
Sbjct: 870 GTPIQNSMQELWALLHFIMPSLFDSHDEFNEWFSKDIESHAEANTKLNQQQLRRLHMILK 929
Query: 672 PFILRRLKRDVEKQLPMKQEHVIYCRLSKRQRNLYE----------DFIASSETQ-ATLA 720
PF+LRR+K++V+ +L K E + C L++RQ LY+ D I ++ T +T
Sbjct: 930 PFMLRRVKKNVQSELGDKIEIDVLCDLTQRQAKLYQVLKSQISTNYDAIENAATNDSTSN 989
Query: 721 SANFFG----MISVIMQLRKVCNHPDLFEGRPIVSSFDMS 756
SA+ G +I+ +MQ RKVCNHPDLFE + S F +
Sbjct: 990 SASNSGSDQNLINAVMQFRKVCNHPDLFERADVDSPFSFT 1029
Score = 455 (165.2 bits), Expect = 1.1e-115, Sum P(4) = 1.1e-115
Identities = 83/152 (54%), Positives = 118/152 (77%)
Query: 994 DCGKLQELAILLRKLKSDGHRALIFTQMTKMLDILEEFISLYGYTYMRLDGSTQPEERQT 1053
+ KL++L LL KLKS+GHR LI+ QMTKM+D++EE+++ Y ++RLDGS++ E+R+
Sbjct: 1297 ESAKLRKLDELLVKLKSEGHRVLIYFQMTKMMDLMEEYLTYRQYNHIRLDGSSKLEDRRD 1356
Query: 1054 LMQRFNTNPKIFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQDRCHRIGQTRE 1113
L+ + TNP+IF+F+LSTR+GG+GINL ADTVIFYDSDWNP +D QA DR HR+GQTR+
Sbjct: 1357 LVHDWQTNPEIFVFLLSTRAGGLGINLTAADTVIFYDSDWNPTIDSQAMDRAHRLGQTRQ 1416
Query: 1114 VHIYRLISESTIEENILKKANQKRALDDLVIQ 1145
V +YRL+ TIEE + +A QK + +V++
Sbjct: 1417 VTVYRLLVRGTIEERMRDRAKQKEQVQQVVME 1448
Score = 76 (31.8 bits), Expect = 1.1e-115, Sum P(4) = 1.1e-115
Identities = 19/52 (36%), Positives = 30/52 (57%)
Query: 28 KDVKKFWMKIEKLVLYKHQMEVDVRKKKALDKQLEFLLGQTERYSSMLAENL 79
+D+KK KIEK + + + E + ++ K K+L FLL QTE YS + +
Sbjct: 551 RDLKK---KIEKEAMEQAKKEEEEKESKRQAKKLNFLLTQTELYSHFIGRKI 599
Score = 53 (23.7 bits), Expect = 1.0e-36, Sum P(3) = 1.0e-36
Identities = 10/23 (43%), Positives = 12/23 (52%)
Query: 577 WKYLILDEAHLIKNWKSQR--WQ 597
WK++ L E LI W Q WQ
Sbjct: 73 WKFINLQEFELISEWNQQSKDWQ 95
Score = 50 (22.7 bits), Expect = 1.4e-113, Sum P(3) = 1.4e-113
Identities = 12/36 (33%), Positives = 20/36 (55%)
Query: 101 EADENGAEEPGVQSKEADEDDAEQHSGFEPQLDAAD 136
+ +ENG E+ + +E ++ D E + FE Q D D
Sbjct: 253 DEEENGEEDE--EEEEIEDLDEEDFAAFEEQDDNDD 286
Score = 42 (19.8 bits), Expect = 1.1e-115, Sum P(4) = 1.1e-115
Identities = 17/59 (28%), Positives = 24/59 (40%)
Query: 73 SMLAENLVDSHKPVQQSPMREQPGIQYKEADENGAEEPGVQSKEADEDDAEQHSGFEPQ 131
S LA N D H + EQ ++ E N E ++K+ D D A H E +
Sbjct: 623 SALAPNKNDFHAIDFDNENDEQLRLRAAENASNALAETRAKAKQFD-DHANAHEEEEEE 680
Score = 40 (19.1 bits), Expect = 3.0e-72, Sum P(4) = 3.0e-72
Identities = 7/20 (35%), Positives = 15/20 (75%)
Query: 1754 FTNLGQSSKLLSAALHDANS 1773
FT G+++ +L+A++ + NS
Sbjct: 1028 FTTFGKTTSMLTASVANNNS 1047
Score = 40 (19.1 bits), Expect = 2.1e-38, Sum P(4) = 2.1e-38
Identities = 16/50 (32%), Positives = 24/50 (48%)
Query: 780 LKGLGLLFTNLDFSMNSWESDELNAIATPASL--IKERADLNNLEEVGPF 827
LKGL L D +N +DE+ T S+ + A+ +N+ GPF
Sbjct: 711 LKGLNWLANLYDQGINGILADEMGLGKTVQSISVLAHLAENHNIW--GPF 758
Score = 39 (18.8 bits), Expect = 2.1e-35, Sum P(4) = 2.1e-35
Identities = 13/47 (27%), Positives = 24/47 (51%)
Query: 563 RLI--IQDSKVFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRR 607
RL+ IQ + +K L EA K W+S+ ++ + +F ++ R
Sbjct: 490 RLVQQIQSIRSTNFRKTSSLCAREA---KKWQSKNFKQIKDFQTRAR 533
Score = 37 (18.1 bits), Expect = 3.3e-112, Sum P(3) = 3.3e-112
Identities = 6/18 (33%), Positives = 10/18 (55%)
Query: 112 VQSKEADEDDAEQHSGFE 129
+ K+ADED+ + E
Sbjct: 136 INEKDADEDEEDDEDELE 153
>POMBASE|SPAC29B12.01 [details] [associations]
symbol:ino80 "SNF2 family helicase Ino80" species:4896
"Schizosaccharomyces pombe" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006281 "DNA repair"
evidence=ISO] [GO:0006338 "chromatin remodeling" evidence=IPI]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0031011 "Ino80 complex" evidence=IDA] [GO:0043140
"ATP-dependent 3'-5' DNA helicase activity" evidence=ISO]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR020838
Pfam:PF00176 Pfam:PF00271 Pfam:PF13892 PROSITE:PS51194
PROSITE:PS51413 SMART:SM00490 PomBase:SPAC29B12.01 GO:GO:0005524
EMBL:CU329670 GO:GO:0006355 GenomeReviews:CU329670_GR GO:GO:0003677
GO:GO:0006281 GO:GO:0006351 GO:GO:0016568 GO:GO:0031011 HSSP:Q97XQ5
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0043140 KO:K11665 HOGENOM:HOG000048482 OrthoDB:EOG41G6C8
RefSeq:NP_001018299.1 ProteinModelPortal:O14148 STRING:O14148
EnsemblFungi:SPAC29B12.01.1 GeneID:3361566 KEGG:spo:SPAC29B12.01
OMA:INDHNSA NextBio:20811604 Uniprot:O14148
Length = 1604
Score = 756 (271.2 bits), Expect = 1.6e-114, Sum P(3) = 1.6e-114
Identities = 141/324 (43%), Positives = 213/324 (65%)
Query: 446 KFPFLLKFPLREYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTIAMLAHLACEKGIWG 505
K P +L L+EYQ GL+WL +YE+ +NGILADEMGLGKT+ +I+++A+LA IWG
Sbjct: 833 KQPKMLMCKLKEYQLKGLNWLANLYEQGINGILADEMGLGKTVQSISVMAYLAETHNIWG 892
Query: 506 PHLIVVPTSVMLNWETEFLKWCPAFKILTYFGSAKERKFKRQGWLKPNS-------FHVC 558
P L++ P S + NW+ E ++ P K + Y+GS K+RK R+ W + N FHV
Sbjct: 893 PFLVIAPASTLHNWQQEITRFVPKLKCIPYWGSTKDRKILRKFWCRKNMTYDENSPFHVV 952
Query: 559 ITTYRLIIQDSKVFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPLQND 618
+T+Y+L++ D++ F+ KW+Y+ILDEA IK+ S RW++LL F + R+LLTGTP+QN
Sbjct: 953 VTSYQLVVLDAQYFQSVKWQYMILDEAQAIKSSSSSRWKSLLAFKCRNRLLLTGTPIQNT 1012
Query: 619 LMELWSLMHFLMPHIFQSHQEFKDWFCNPISGMVEGQEKVNKEVVDRLHNVLRPFILRRL 678
+ ELW+L+HF+MP +F SH EF +WF I + ++N++ + RLH +L+PF+LRR+
Sbjct: 1013 MQELWALLHFIMPSLFDSHNEFSEWFSKDIESHAQSNTQLNEQQLKRLHMILKPFMLRRV 1072
Query: 679 KRDVEKQLPMKQEHVIYCRLSKRQRNLYEDF-----IASSETQATLASANFFGMI-SVIM 732
K++V+ +L K E +YC L++RQ+ LY+ IA +A L + I +++M
Sbjct: 1073 KKNVQSELGEKIEKEVYCDLTQRQKILYQALRRQISIAELLEKAILGGDDTVASIMNLVM 1132
Query: 733 QLRKVCNHPDLFEGRPIVSSFDMS 756
Q RKVCNHPDLFE + S ++
Sbjct: 1133 QFRKVCNHPDLFEREDVRSPLSLA 1156
Score = 445 (161.7 bits), Expect = 1.6e-114, Sum P(3) = 1.6e-114
Identities = 84/165 (50%), Positives = 123/165 (74%)
Query: 994 DCGKLQELAILLRKLKSDGHRALIFTQMTKMLDILEEFISLYGYTYMRLDGSTQPEERQT 1053
D GKL +L LL +LK++ HR LI+ QMT+M+D++EE+++ Y Y+RLDGS++ +R+
Sbjct: 1427 DSGKLSKLDKLLVELKANDHRVLIYFQMTRMIDLMEEYLTFRQYKYLRLDGSSKISQRRD 1486
Query: 1054 LMQRFNTNPKIFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQDRCHRIGQTRE 1113
++ + T P++F+F+LSTR+GG+GINL ADTVIFYDSDWNP++D QA DR HRIGQ ++
Sbjct: 1487 MVTEWQTRPELFVFLLSTRAGGLGINLTAADTVIFYDSDWNPSIDSQAMDRAHRIGQQKQ 1546
Query: 1114 VHIYRLISESTIEENILKKANQKRALDDLVIQSGGYNTEFFKKLD 1158
V +YR I+ TIEE I+ +A +K + +VI SGG T K++D
Sbjct: 1547 VTVYRFITRGTIEERIVIRAKEKEEVQKVVI-SGG-ETRPTKQMD 1589
Score = 79 (32.9 bits), Expect = 1.6e-114, Sum P(3) = 1.6e-114
Identities = 23/102 (22%), Positives = 48/102 (47%)
Query: 26 ISKDVKKFWMKIEKLVLYKHQMEVDVRKKKALDKQLEFLLGQTERYSSMLAENLVDSHKP 85
+ +D++K K E+ L + + E ++R+ + ++L+FL+ QTE YS + + D +
Sbjct: 699 VERDLRK---KAEREALDRAKKEEELRESRRQARKLDFLITQTELYSHFVGRKM-DREQD 754
Query: 86 VQQSPMREQPG-IQYKEADENGAEEPGVQSKEADEDDAEQHS 126
+ + I + +E V+S + A +HS
Sbjct: 755 LPSATNTASVSEINFDSDEEEDIRRLAVESAQEAVQKAREHS 796
Score = 39 (18.8 bits), Expect = 7.4e-72, Sum P(3) = 7.4e-72
Identities = 10/41 (24%), Positives = 16/41 (39%)
Query: 1821 YGSDLETSVNKSTRENHHLKDSQVAENRFRDAARACIEDSL 1861
Y SD S++ + H Q +R R IE+ +
Sbjct: 1522 YDSDWNPSIDSQAMDRAHRIGQQKQVTVYRFITRGTIEERI 1562
Score = 37 (18.1 bits), Expect = 3.7e-35, Sum P(2) = 3.7e-35
Identities = 9/18 (50%), Positives = 10/18 (55%)
Query: 464 DWLVTMYEKRLNGILADE 481
D LV YE R N + A E
Sbjct: 360 DRLVCRYENRYNKLHASE 377
>UNIPROTKB|I3LTT5 [details] [associations]
symbol:SMARCA1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271 Pfam:PF13892
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003677
GO:GO:0004386 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00680000100002 EMBL:CU695129
Ensembl:ENSSSCT00000027860 Uniprot:I3LTT5
Length = 778
Score = 693 (249.0 bits), Expect = 1.7e-112, Sum P(3) = 1.7e-112
Identities = 132/294 (44%), Positives = 194/294 (65%)
Query: 454 PLREYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTIAMLAHLACEKGIWGPHLIVVPT 513
PLR+YQ GL+WL+++YE +NGILADEMGLGKT+ TIA+L +L + I GPH+++VP
Sbjct: 185 PLRDYQIRGLNWLISLYENGVNGILADEMGLGKTLQTIALLGYLKHYRNIPGPHMVLVPK 244
Query: 514 SVMLNWETEFLKWCPAFKILTYFGSAKERKFKRQGWLKPNSFHVCITTYRLIIQDSKVFK 573
S + NW EF +W P+ +++ + G R + + P + VC+T+Y ++I++ VFK
Sbjct: 245 STLHNWMNEFKRWVPSLRVICFVGDKDARAAFIRDEMMPGEWDVCVTSYEMVIKEKSVFK 304
Query: 574 RKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPLQNDLMELWSLMHFLMPHI 633
+ W+YL++DEAH IKN KS+ + + F S R+LLTGTPLQN+L ELW+L++FL+P +
Sbjct: 305 KFHWRYLVIDEAHRIKNEKSKLSEIVREFKSTNRLLLTGTPLQNNLHELWALLNFLLPDV 364
Query: 634 FQSHQEFKDWFCNPISGMVEGQEKVNKEVVDRLHNVLRPFILRRLKRDVEKQLPMKQEHV 693
F S +F WF + G +K+ V+RLH VL+PF+LRR+K DVEK LP K+E
Sbjct: 365 FNSADDFDSWF--DTKNCL-GDQKL----VERLHAVLKPFLLRRIKTDVEKSLPPKKEIK 417
Query: 694 IYCRLSKRQRNLYEDFIASS-ETQATLASANFFGMISVIMQLRKVCNHPDLFEG 746
IY LSK QR Y + + + + +++++MQLRK CNHP LF+G
Sbjct: 418 IYLGLSKMQREWYTKILMKDIDVLNSAGKMDKMRLLNILMQLRKCCNHPYLFDG 471
Score = 435 (158.2 bits), Expect = 1.7e-112, Sum P(3) = 1.7e-112
Identities = 86/165 (52%), Positives = 114/165 (69%)
Query: 984 YFPDRRLIQFDCGKLQELAILLRKLKSDGHRALIFTQMTKMLDILEEFISLYGYTYMRLD 1043
Y D ++ + GK+ L LL KLK G R LIF+QMT++LDILE++ GY Y RLD
Sbjct: 478 YTTDEHIVS-NSGKMVVLDKLLAKLKEQGSRVLIFSQMTRLLDILEDYCMWRGYEYCRLD 536
Query: 1044 GSTQPEERQTLMQRFNT-NPKIFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQ 1102
G T EER+ ++ FN N F+F+LSTR+GG+GINL AD VI YDSDWNP +D QA
Sbjct: 537 GQTPHEEREEAIEAFNVPNSSRFIFMLSTRAGGLGINLASADVVILYDSDWNPQVDLQAM 596
Query: 1103 DRCHRIGQTREVHIYRLISESTIEENILKKANQKRALDDLVIQSG 1147
DR HRIGQ + V ++RLI+++T+EE I+++A K LD +VIQ G
Sbjct: 597 DRAHRIGQKKPVRVFRLITDNTVEERIVERAEIKLRLDSIVIQQG 641
Score = 56 (24.8 bits), Expect = 1.7e-112, Sum P(3) = 1.7e-112
Identities = 24/102 (23%), Positives = 49/102 (48%)
Query: 28 KDVKKFWMKIE-KLVLYKHQMEVDVRKKKALD--KQLEFLLGQTERYSSMLAENLVDSHK 84
K+ F +K+ K + +M+ + +K D K+ EFLL QTE ++ + + S
Sbjct: 62 KNASPFQLKLAAKASKSEKEMDPEYEEKMKADRAKRFEFLLKQTELFAHFIQPSAQKS-- 119
Query: 85 PVQQSPMREQPGI-QYKEADENGAEEPG-VQSKEADEDDAEQ 124
P SP+ + G + K+ D+ G + + ++++ E+
Sbjct: 120 PT--SPLNIKLGRPRIKKDDKQSLISAGDYRHRRTEQEEDEE 159
>UNIPROTKB|K7GNV1 [details] [associations]
symbol:SMARCA1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=IEA] [GO:0031491
"nucleosome binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR000330
InterPro:IPR001005 InterPro:IPR001650 InterPro:IPR009057
InterPro:IPR015194 InterPro:IPR015195 InterPro:IPR020838
Pfam:PF00176 Pfam:PF00271 Pfam:PF09110 Pfam:PF09111 Pfam:PF13892
PROSITE:PS51194 SMART:SM00490 SMART:SM00717 Gene3D:1.10.10.60
SUPFAM:SSF46689 InterPro:IPR017884 PROSITE:PS51293
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00680000100002 SUPFAM:SSF101224 EMBL:CU695129
GeneID:100188905 RefSeq:XP_003360492.1 Ensembl:ENSSSCT00000032734
Uniprot:K7GNV1
Length = 1061
Score = 693 (249.0 bits), Expect = 2.7e-106, Sum P(3) = 2.7e-106
Identities = 132/294 (44%), Positives = 194/294 (65%)
Query: 454 PLREYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTIAMLAHLACEKGIWGPHLIVVPT 513
PLR+YQ GL+WL+++YE +NGILADEMGLGKT+ TIA+L +L + I GPH+++VP
Sbjct: 185 PLRDYQIRGLNWLISLYENGVNGILADEMGLGKTLQTIALLGYLKHYRNIPGPHMVLVPK 244
Query: 514 SVMLNWETEFLKWCPAFKILTYFGSAKERKFKRQGWLKPNSFHVCITTYRLIIQDSKVFK 573
S + NW EF +W P+ +++ + G R + + P + VC+T+Y ++I++ VFK
Sbjct: 245 STLHNWMNEFKRWVPSLRVICFVGDKDARAAFIRDEMMPGEWDVCVTSYEMVIKEKSVFK 304
Query: 574 RKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPLQNDLMELWSLMHFLMPHI 633
+ W+YL++DEAH IKN KS+ + + F S R+LLTGTPLQN+L ELW+L++FL+P +
Sbjct: 305 KFHWRYLVIDEAHRIKNEKSKLSEIVREFKSTNRLLLTGTPLQNNLHELWALLNFLLPDV 364
Query: 634 FQSHQEFKDWFCNPISGMVEGQEKVNKEVVDRLHNVLRPFILRRLKRDVEKQLPMKQEHV 693
F S +F WF + G +K+ V+RLH VL+PF+LRR+K DVEK LP K+E
Sbjct: 365 FNSADDFDSWF--DTKNCL-GDQKL----VERLHAVLKPFLLRRIKTDVEKSLPPKKEIK 417
Query: 694 IYCRLSKRQRNLYEDFIASS-ETQATLASANFFGMISVIMQLRKVCNHPDLFEG 746
IY LSK QR Y + + + + +++++MQLRK CNHP LF+G
Sbjct: 418 IYLGLSKMQREWYTKILMKDIDVLNSAGKMDKMRLLNILMQLRKCCNHPYLFDG 471
Score = 435 (158.2 bits), Expect = 2.7e-106, Sum P(3) = 2.7e-106
Identities = 86/165 (52%), Positives = 114/165 (69%)
Query: 984 YFPDRRLIQFDCGKLQELAILLRKLKSDGHRALIFTQMTKMLDILEEFISLYGYTYMRLD 1043
Y D ++ + GK+ L LL KLK G R LIF+QMT++LDILE++ GY Y RLD
Sbjct: 478 YTTDEHIVS-NSGKMVVLDKLLAKLKEQGSRVLIFSQMTRLLDILEDYCMWRGYEYCRLD 536
Query: 1044 GSTQPEERQTLMQRFNT-NPKIFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQ 1102
G T EER+ ++ FN N F+F+LSTR+GG+GINL AD VI YDSDWNP +D QA
Sbjct: 537 GQTPHEEREEAIEAFNVPNSSRFIFMLSTRAGGLGINLASADVVILYDSDWNPQVDLQAM 596
Query: 1103 DRCHRIGQTREVHIYRLISESTIEENILKKANQKRALDDLVIQSG 1147
DR HRIGQ + V ++RLI+++T+EE I+++A K LD +VIQ G
Sbjct: 597 DRAHRIGQKKPVRVFRLITDNTVEERIVERAEIKLRLDSIVIQQG 641
Score = 56 (24.8 bits), Expect = 2.7e-106, Sum P(3) = 2.7e-106
Identities = 24/102 (23%), Positives = 49/102 (48%)
Query: 28 KDVKKFWMKIE-KLVLYKHQMEVDVRKKKALD--KQLEFLLGQTERYSSMLAENLVDSHK 84
K+ F +K+ K + +M+ + +K D K+ EFLL QTE ++ + + S
Sbjct: 62 KNASPFQLKLAAKASKSEKEMDPEYEEKMKADRAKRFEFLLKQTELFAHFIQPSAQKS-- 119
Query: 85 PVQQSPMREQPGI-QYKEADENGAEEPG-VQSKEADEDDAEQ 124
P SP+ + G + K+ D+ G + + ++++ E+
Sbjct: 120 PT--SPLNIKLGRPRIKKDDKQSLISAGDYRHRRTEQEEDEE 159
>DICTYBASE|DDB_G0292948 [details] [associations]
symbol:isw "CHR group protein" species:44689
"Dictyostelium discoideum" [GO:0043044 "ATP-dependent chromatin
remodeling" evidence=IEA] [GO:0031491 "nucleosome binding"
evidence=IEA] [GO:0016818 "hydrolase activity, acting on acid
anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
[GO:0006338 "chromatin remodeling" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0016587 "Isw1
complex" evidence=ISS] [GO:0006200 "ATP catabolic process"
evidence=ISS] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR009057 InterPro:IPR015194 InterPro:IPR015195
Pfam:PF00176 Pfam:PF00271 Pfam:PF09110 Pfam:PF09111 PROSITE:PS51194
SMART:SM00490 SMART:SM00717 dictyBase:DDB_G0292948 GO:GO:0005524
GenomeReviews:CM000155_GR GO:GO:0003677 EMBL:AAFI02000197
GO:GO:0016887 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0006338
InterPro:IPR017884 PROSITE:PS51293 GO:GO:0004386 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0031491
GO:GO:0043044 GO:GO:0016587 KO:K11654 SUPFAM:SSF101224
RefSeq:XP_629432.1 ProteinModelPortal:Q54CI4 STRING:Q54CI4
PRIDE:Q54CI4 EnsemblProtists:DDB0231763 GeneID:8628951
KEGG:ddi:DDB_G0292948 InParanoid:Q54CI4 OMA:IREANAF
ProtClustDB:CLSZ2728711 Uniprot:Q54CI4
Length = 1221
Score = 713 (256.0 bits), Expect = 1.6e-105, Sum P(4) = 1.6e-105
Identities = 135/302 (44%), Positives = 200/302 (66%)
Query: 448 PFLLKFPLREYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTIAMLAHLACEKGIWGPH 507
P++ +R+YQ GL+WL+ +YE+ +NGILADEMGLGKT+ TI++L +L+ KGI GPH
Sbjct: 269 PYIKSGTMRDYQVYGLNWLIQLYERGINGILADEMGLGKTLQTISLLGYLSEYKGIRGPH 328
Query: 508 LIVVPTSVMLNWETEFLKWCPAFKILTYFGSAKERKFKRQGWLKPNSFHVCITTYRLIIQ 567
LI+ P S + W EF +WCP +++ + GS +ER+ ++ L F VCITTY + I+
Sbjct: 329 LIIAPKSTLSGWAKEFTRWCPFLRVVRFHGSKEEREDIKKNQLIFKKFDVCITTYEVAIR 388
Query: 568 DSKVFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPLQNDLMELWSLMH 627
+ FK+ W+Y+I+DEAH IKN S + + FNS+ R+L+TGTPLQN+L ELWSL++
Sbjct: 389 EKSTFKKFSWRYIIIDEAHRIKNENSVLSKGVRMFNSQFRLLITGTPLQNNLHELWSLLN 448
Query: 628 FLMPHIFQSHQEFKDWFCNPISGMVEGQEKVNKEVVDRLHNVLRPFILRRLKRDVEKQLP 687
FL+P +F S +F WF ++ E Q+ EV+D+LH VLRPF+LRR+K +VEK LP
Sbjct: 449 FLLPDVFSSSDDFDKWF--DLANNTENQQ----EVIDKLHKVLRPFLLRRIKTEVEKSLP 502
Query: 688 MKQEHVIYCRLSKRQRNLYEDFIASSETQATLASANFFG---MISVIMQLRKVCNHPDLF 744
K+E ++ LS Q+ Y+ ++ + + G ++++ MQLRK CNHP LF
Sbjct: 503 PKKEIKLFVGLSTMQKEWYKRLLSKDLDAVVVGAKGNTGRVRLLNICMQLRKACNHPYLF 562
Query: 745 EG 746
+G
Sbjct: 563 DG 564
Score = 419 (152.6 bits), Expect = 1.6e-105, Sum P(4) = 1.6e-105
Identities = 96/228 (42%), Positives = 141/228 (61%)
Query: 984 YFPDRRLIQFDCGKLQELAILLRKLKSDGHRALIFTQMTKMLDILEEFISLYGYTYMRLD 1043
Y LI + GK+ L LL+KLK G R LIF+QM++MLDILE+++ GY Y R+D
Sbjct: 570 YTTGEHLID-NSGKMALLDKLLKKLKERGSRVLIFSQMSRMLDILEDYMLYRGYKYARID 628
Query: 1044 GSTQPEERQTLMQRFNT-NPKIFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQ 1102
GST+ R+ ++ +N +F F+L+TR+GG+GI L AD VI +DSDWNP MD QAQ
Sbjct: 629 GSTESIVRENSIENYNKPGSDLFAFLLTTRAGGLGITLNTADIVILFDSDWNPQMDLQAQ 688
Query: 1103 DRCHRIGQTREVHIYRLISESTIEENILKKANQKRALDDLVIQSGGYNTEFFKKLDPMEL 1162
DR HRIGQT+ V +YR ++E+++EE +++KA K LD LVIQ G E K P EL
Sbjct: 689 DRAHRIGQTKPVTVYRFVTENSMEEKMVEKAEMKLQLDALVIQQGRL-VEANKNAKPEEL 747
Query: 1163 FSGHRTLPMKTMQKEKAINNGNEVSLSNADVEAALKCVEDEADYMALK 1210
+ R + K K+ ++++ D+++ LK E++ + + K
Sbjct: 748 LAMLR-FGADDIFKSKSS------TITDEDIDSILKKGEEKTEQLNSK 788
Score = 50 (22.7 bits), Expect = 1.6e-105, Sum P(4) = 1.6e-105
Identities = 11/28 (39%), Positives = 17/28 (60%)
Query: 1210 KRAEQEEAVDNQEFTEEAVGRPEDDELV 1237
K E+EE ++ +E EE V E++E V
Sbjct: 1184 KPVEEEEPMEEEEEEEEEVEEEEEEEEV 1211
Score = 49 (22.3 bits), Expect = 1.6e-105, Sum P(4) = 1.6e-105
Identities = 17/68 (25%), Positives = 39/68 (57%)
Query: 26 ISKDVKKFWMKIEKLVLYKHQMEVDVRKKKALDKQLEFLLGQTERYSSMLAE--NLVDSH 83
I + +K ++EK + Q++ D K+K+ + +L++LL +TE ++ ++ N ++
Sbjct: 144 IREQQRKQLQELEKN--QRQQLQED--KEKSANARLKYLLERTEIFTHFVSNSNNNNNTK 199
Query: 84 KPVQQSPM 91
K +SP+
Sbjct: 200 KTKTKSPV 207
Score = 41 (19.5 bits), Expect = 1.4e-104, Sum P(4) = 1.4e-104
Identities = 12/50 (24%), Positives = 20/50 (40%)
Query: 1874 KLRSVPKSQSLGKHKLSLSDSVKCPKSKLRKTSMEHSEIQHSSPEPVSNQ 1923
K + P S+ K + + S PKSK T+ + +PV +
Sbjct: 1140 KRKDAPPSKPPAKPSKASAKSKPAPKSKTSTTTKPTTTNGRGKKKPVEEE 1189
Score = 40 (19.1 bits), Expect = 1.4e-104, Sum P(4) = 1.4e-104
Identities = 13/43 (30%), Positives = 20/43 (46%)
Query: 88 QSPMREQPGIQYKEADENGAEEPGVQSKEADE-DDAEQHSGFE 129
+SP G Q ++ EN E + E +E DD E++ E
Sbjct: 48 ESPTISSSGNQSPKSMENDNENEEDEVMEEEEVDDNEENGNDE 90
>MGI|MGI:1935127 [details] [associations]
symbol:Smarca1 "SWI/SNF related, matrix associated, actin
dependent regulator of chromatin, subfamily a, member 1"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000733 "DNA strand renaturation" evidence=ISO]
[GO:0000790 "nuclear chromatin" evidence=IDA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0006338 "chromatin
remodeling" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=ISO] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=TAS] [GO:0007420 "brain
development" evidence=ISO;IMP] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0016589 "NURF complex" evidence=ISO] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0016817 "hydrolase activity,
acting on acid anhydrides" evidence=IEA] [GO:0016818 "hydrolase
activity, acting on acid anhydrides, in phosphorus-containing
anhydrides" evidence=IEA] [GO:0030182 "neuron differentiation"
evidence=IMP] [GO:0031491 "nucleosome binding" evidence=IEA]
[GO:0036310 "annealing helicase activity" evidence=ISO] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=ISO] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0070615 "nucleosome-dependent ATPase activity" evidence=ISO]
[GO:0090537 "CERF complex" evidence=ISO] [GO:2000177 "regulation of
neural precursor cell proliferation" evidence=IGI;IMP]
InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR009057 InterPro:IPR015194 InterPro:IPR015195
InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271 Pfam:PF09110
Pfam:PF09111 Pfam:PF13892 PROSITE:PS51194 SMART:SM00490
SMART:SM00717 MGI:MGI:1935127 GO:GO:0005524 GO:GO:0005634
GO:GO:0045893 GO:GO:0007420 GO:GO:0030182 GO:GO:0003677
GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0006338
InterPro:IPR017884 PROSITE:PS51293 GO:GO:0004386 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0031491
GO:GO:0043044 GO:GO:0016589 GO:GO:0036310 GO:GO:0008094
GeneTree:ENSGT00680000100002 HOGENOM:HOG000192862 SUPFAM:SSF101224
CTD:6594 HOVERGEN:HBG056329 KO:K11727 EMBL:AF325920 EMBL:AK030741
EMBL:AL671903 EMBL:BC057115 IPI:IPI00314654 IPI:IPI00761324
RefSeq:NP_444353.3 UniGene:Mm.229151 HSSP:Q24368
ProteinModelPortal:Q6PGB8 SMR:Q6PGB8 STRING:Q6PGB8
PhosphoSite:Q6PGB8 PaxDb:Q6PGB8 PRIDE:Q6PGB8
Ensembl:ENSMUST00000077569 Ensembl:ENSMUST00000088973
Ensembl:ENSMUST00000101616 GeneID:93761 KEGG:mmu:93761
UCSC:uc009tbl.2 UCSC:uc009tbm.2 InParanoid:B1AUP6 OrthoDB:EOG44J2H9
NextBio:351647 Bgee:Q6PGB8 Genevestigator:Q6PGB8
GermOnline:ENSMUSG00000031099 Uniprot:Q6PGB8
Length = 1046
Score = 691 (248.3 bits), Expect = 1.6e-104, Sum P(3) = 1.6e-104
Identities = 132/294 (44%), Positives = 194/294 (65%)
Query: 454 PLREYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTIAMLAHLACEKGIWGPHLIVVPT 513
PLR+YQ GL+WL+++YE +NGILADEMGLGKT+ TIA+L +L + I GPH+++VP
Sbjct: 186 PLRDYQIRGLNWLISLYENGVNGILADEMGLGKTLQTIALLGYLKHYRNIPGPHMVLVPK 245
Query: 514 SVMLNWETEFLKWCPAFKILTYFGSAKERKFKRQGWLKPNSFHVCITTYRLIIQDSKVFK 573
S + NW EF +W P+ +++ + G R + + P + VC+T+Y ++I++ VFK
Sbjct: 246 STLHNWMNEFKRWVPSLRVICFVGDKDVRAAFIRDEMMPGEWDVCVTSYEMVIKEKSVFK 305
Query: 574 RKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPLQNDLMELWSLMHFLMPHI 633
+ W+YL++DEAH IKN KS+ + + F S R+LLTGTPLQN+L ELW+L++FL+P +
Sbjct: 306 KFHWRYLVIDEAHRIKNEKSKLSEIVREFKSTNRLLLTGTPLQNNLHELWALLNFLLPDV 365
Query: 634 FQSHQEFKDWFCNPISGMVEGQEKVNKEVVDRLHNVLRPFILRRLKRDVEKQLPMKQEHV 693
F S +F WF + G +K+ V+RLH VL+PF+LRR+K DVEK LP K+E
Sbjct: 366 FNSADDFDSWF--DTKNCL-GDQKL----VERLHAVLKPFLLRRIKTDVEKSLPPKKEIK 418
Query: 694 IYCRLSKRQRNLYEDFIASS-ETQATLASANFFGMISVIMQLRKVCNHPDLFEG 746
IY LSK QR Y + + + + +++++MQLRK CNHP LF+G
Sbjct: 419 IYLGLSKMQREWYTKILMKDIDVLNSSGKMDKMRLLNILMQLRKCCNHPYLFDG 472
Score = 428 (155.7 bits), Expect = 1.6e-104, Sum P(3) = 1.6e-104
Identities = 87/180 (48%), Positives = 118/180 (65%)
Query: 984 YFPDRRLIQFDCGKLQELAILLRKLKSDGHRALIFTQMTKMLDILEEFISLYGYTYMRLD 1043
Y D ++ + GK+ L LL ++K G R LIF+QMT++LDILE++ GY Y RLD
Sbjct: 479 YTTDEHIVG-NSGKMVALDKLLARIKEQGSRVLIFSQMTRLLDILEDYCMWRGYEYSRLD 537
Query: 1044 GSTQPEERQTLMQRFNT-NPKIFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQ 1102
G T EER+ + FN N F+F+LSTR+GG+GINL AD VI YDSDWNP +D QA
Sbjct: 538 GQTPHEEREEAIDAFNAPNSSKFIFMLSTRAGGLGINLASADVVILYDSDWNPQVDLQAM 597
Query: 1103 DRCHRIGQTREVHIYRLISESTIEENILKKANQKRALDDLVIQSGGYNTEFFKKLDPMEL 1162
DR HRIGQ + V ++RLI+++T+EE I+++A K LD +VIQ G + KL E+
Sbjct: 598 DRAHRIGQKKPVRVFRLITDNTVEERIVERAEIKLRLDSIVIQQGRLIDQQSNKLAKEEM 657
Score = 47 (21.6 bits), Expect = 1.6e-104, Sum P(3) = 1.6e-104
Identities = 20/84 (23%), Positives = 41/84 (48%)
Query: 43 YKHQMEVDVRKKKALDKQLEFLLGQTERYSSMLAENLVDSHKPVQQSPMR-EQPGIQYKE 101
Y+ +M V++ K K+ EFLL QTE ++ + + S P M+ +P + K+
Sbjct: 82 YEEKM-VNMPLKADRAKRFEFLLKQTELFAHFIQPSAQKS--PTSPLNMKLARPRV--KK 136
Query: 102 ADENGAEEPG-VQSKEADEDDAEQ 124
D+ G + + ++++ E+
Sbjct: 137 DDKQSLISVGDYRHRRTEQEEDEE 160
>UNIPROTKB|F6TQG2 [details] [associations]
symbol:SMARCA1 "Probable global transcription activator
SNF2L1" species:9606 "Homo sapiens" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0031491 "nucleosome
binding" evidence=IEA] [GO:0043044 "ATP-dependent chromatin
remodeling" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR009057 InterPro:IPR015194 InterPro:IPR015195
InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271 Pfam:PF09110
Pfam:PF09111 Pfam:PF13892 PROSITE:PS51194 SMART:SM00490
SMART:SM00717 GO:GO:0005524 GO:GO:0003677 Gene3D:1.10.10.60
SUPFAM:SSF46689 InterPro:IPR017884 PROSITE:PS51293 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0016585
GO:GO:0031491 GO:GO:0043044 ChiTaRS:SMARCA1 SUPFAM:SSF101224
EMBL:AL138745 EMBL:AL022577 HGNC:HGNC:11097 IPI:IPI00647510
ProteinModelPortal:F6TQG2 SMR:F6TQG2 PRIDE:F6TQG2
Ensembl:ENST00000450039 ArrayExpress:F6TQG2 Bgee:F6TQG2
Uniprot:F6TQG2
Length = 1005
Score = 692 (248.7 bits), Expect = 1.9e-104, Sum P(3) = 1.9e-104
Identities = 132/294 (44%), Positives = 194/294 (65%)
Query: 454 PLREYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTIAMLAHLACEKGIWGPHLIVVPT 513
PLR+YQ GL+WL+++YE +NGILADEMGLGKT+ TIA+L +L + I GPH+++VP
Sbjct: 161 PLRDYQIRGLNWLISLYENGVNGILADEMGLGKTLQTIALLGYLKHYRNIPGPHMVLVPK 220
Query: 514 SVMLNWETEFLKWCPAFKILTYFGSAKERKFKRQGWLKPNSFHVCITTYRLIIQDSKVFK 573
S + NW EF +W P+ +++ + G R + + P + VC+T+Y ++I++ VFK
Sbjct: 221 STLHNWMNEFKRWVPSLRVICFVGDKDARAAFIRDEMMPGEWDVCVTSYEMVIKEKSVFK 280
Query: 574 RKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPLQNDLMELWSLMHFLMPHI 633
+ W+YL++DEAH IKN KS+ + + F S R+LLTGTPLQN+L ELW+L++FL+P +
Sbjct: 281 KFHWRYLVIDEAHRIKNEKSKLSEIVREFKSTNRLLLTGTPLQNNLHELWALLNFLLPDV 340
Query: 634 FQSHQEFKDWFCNPISGMVEGQEKVNKEVVDRLHNVLRPFILRRLKRDVEKQLPMKQEHV 693
F S +F WF + G +K+ V+RLH VL+PF+LRR+K DVEK LP K+E
Sbjct: 341 FNSADDFDSWF--DTKNCL-GDQKL----VERLHAVLKPFLLRRIKTDVEKSLPPKKEIK 393
Query: 694 IYCRLSKRQRNLYEDFIASS-ETQATLASANFFGMISVIMQLRKVCNHPDLFEG 746
IY LSK QR Y + + + + +++++MQLRK CNHP LF+G
Sbjct: 394 IYLGLSKMQREWYTKILMKDIDVLNSSGKMDKMRLLNILMQLRKCCNHPYLFDG 447
Score = 408 (148.7 bits), Expect = 1.9e-104, Sum P(3) = 1.9e-104
Identities = 92/192 (47%), Positives = 120/192 (62%)
Query: 984 YFPDRRLIQFDCGKLQELAILLRKLKSDGHRALIFTQMTKMLDILEEFISLYGYTYMRLD 1043
Y D ++ + GK+ L LL KLK G R LIF+QMT++LDILE++ GY Y RLD
Sbjct: 454 YTTDEHIVS-NSGKMVVLDKLLAKLKEQGSRVLIFSQMTRLLDILEDYCMWRGYEYCRLD 512
Query: 1044 GSTQPEERQT-------LMQR-----FNT-NPKIFLFILSTRSGGVGINLVGADTVIFYD 1090
G T EER+ L QR FN N F+F+LSTR+GG+GINL AD VI YD
Sbjct: 513 GQTPHEEREDKFLEVEFLGQREAIEAFNAPNSSKFIFMLSTRAGGLGINLASADVVILYD 572
Query: 1091 SDWNPAMDQQAQDRCHRIGQTREVHIYRLISESTIEENILKKANQKRALDDLVIQSGGYN 1150
SDWNP +D QA DR HRIGQ + V ++RLI+++T+EE I+++A K LD +VIQ G
Sbjct: 573 SDWNPQVDLQAMDRAHRIGQKKPVRVFRLITDNTVEERIVERAEIKLRLDSIVIQQGRLI 632
Query: 1151 TEFFKKLDPMEL 1162
+ KL E+
Sbjct: 633 DQQSNKLAKEEM 644
Score = 59 (25.8 bits), Expect = 1.9e-104, Sum P(3) = 1.9e-104
Identities = 23/80 (28%), Positives = 39/80 (48%)
Query: 28 KDVKKFWMKIE-KLVLYKHQMEVDVRKKKALD--KQLEFLLGQTERYSSMLAENLVDSHK 84
K+V F +K+ K + +M+ + +K D K+ EFLL QTE ++ + + S
Sbjct: 38 KNVSSFQLKLAAKAPKSEKEMDPEYEEKMKADRAKRFEFLLKQTELFAHFIQPSAQKS-- 95
Query: 85 PVQQSPMREQPGIQYKEADE 104
P SP+ + G + DE
Sbjct: 96 PT--SPLNMKLGRPRIKKDE 113
>MGI|MGI:1935129 [details] [associations]
symbol:Smarca5 "SWI/SNF related, matrix associated, actin
dependent regulator of chromatin, subfamily a, member 5"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000183 "chromatin silencing at rDNA"
evidence=IDA] [GO:0000793 "condensed chromosome" evidence=ISO]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=ISO] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005524 "ATP
binding" evidence=ISO] [GO:0005634 "nucleus" evidence=ISO;IDA]
[GO:0005677 "chromatin silencing complex" evidence=IDA] [GO:0006200
"ATP catabolic process" evidence=ISO] [GO:0006302 "double-strand
break repair" evidence=IMP] [GO:0006333 "chromatin assembly or
disassembly" evidence=IDA] [GO:0006334 "nucleosome assembly"
evidence=ISO] [GO:0006338 "chromatin remodeling"
evidence=ISO;IGI;IDA] [GO:0006352 "DNA-dependent transcription,
initiation" evidence=ISO] [GO:0009790 "embryo development"
evidence=IMP] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0016584 "nucleosome positioning" evidence=ISO] [GO:0016589
"NURF complex" evidence=ISO] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0016817 "hydrolase activity, acting on acid
anhydrides" evidence=IEA] [GO:0016818 "hydrolase activity, acting
on acid anhydrides, in phosphorus-containing anhydrides"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISO]
[GO:0031213 "RSF complex" evidence=ISO] [GO:0031491 "nucleosome
binding" evidence=IEA] [GO:0043044 "ATP-dependent chromatin
remodeling" evidence=ISO] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IMP;TAS] InterPro:IPR000330
InterPro:IPR001005 InterPro:IPR001650 InterPro:IPR009057
InterPro:IPR015194 InterPro:IPR015195 InterPro:IPR020838
Pfam:PF00176 Pfam:PF00271 Pfam:PF09110 Pfam:PF09111 Pfam:PF13892
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00717
MGI:MGI:1935129 GO:GO:0005524 GO:GO:0045893 GO:GO:0005730
GO:GO:0003677 GO:GO:0006352 GO:GO:0016887 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0006338 GO:GO:0009790 GO:GO:0043596
GO:GO:0006333 InterPro:IPR017884 PROSITE:PS51293 GO:GO:0000183
GO:GO:0006302 GO:GO:0004386 GO:GO:0000793 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0031491
GO:GO:0043044 GO:GO:0016584 GO:GO:0006334 GO:GO:0005677
GO:GO:0016589 GeneTree:ENSGT00680000100002 HOGENOM:HOG000192862
KO:K11654 SUPFAM:SSF101224 OMA:EDYCHWR GO:GO:0031213
HOVERGEN:HBG056329 OrthoDB:EOG44J2H9 CTD:8467 EMBL:AF375046
EMBL:AF325921 EMBL:BC021922 EMBL:BC053069 EMBL:AK039811
EMBL:AK052320 IPI:IPI00396739 RefSeq:NP_444354.2 UniGene:Mm.246803
ProteinModelPortal:Q91ZW3 SMR:Q91ZW3 DIP:DIP-36073N IntAct:Q91ZW3
MINT:MINT-1867515 STRING:Q91ZW3 PhosphoSite:Q91ZW3 PaxDb:Q91ZW3
PRIDE:Q91ZW3 Ensembl:ENSMUST00000043359 GeneID:93762 KEGG:mmu:93762
UCSC:uc009mja.1 InParanoid:Q91ZW3 NextBio:351651 Bgee:Q91ZW3
Genevestigator:Q91ZW3 GermOnline:ENSMUSG00000031715 Uniprot:Q91ZW3
Length = 1051
Score = 691 (248.3 bits), Expect = 8.7e-104, Sum P(2) = 8.7e-104
Identities = 138/311 (44%), Positives = 202/311 (64%)
Query: 441 TQVRTKF---PFLLKF-PLREYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTIAMLAH 496
T V T+F P +K+ LR+YQ GL+WL+++YE +NGILADEMGLGKT+ TI++L +
Sbjct: 161 TNVCTRFEDSPSYVKWGKLRDYQVRGLNWLISLYENGINGILADEMGLGKTLQTISLLGY 220
Query: 497 LACEKGIWGPHLIVVPTSVMLNWETEFLKWCPAFKILTYFGSAKERKFKRQGWLKPNSFH 556
+ + I GPH+++VP S + NW +EF KW P + + G ++R + L P +
Sbjct: 221 MKHYRNIPGPHMVLVPKSTLHNWMSEFKKWVPTLRSVCLIGDKEQRAAFVRDVLLPGEWD 280
Query: 557 VCITTYRLIIQDSKVFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPLQ 616
VC+T+Y ++I++ VFK+ W+YL++DEAH IKN KS+ + + F + R+LLTGTPLQ
Sbjct: 281 VCVTSYEMLIKEKSVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGTPLQ 340
Query: 617 NDLMELWSLMHFLMPHIFQSHQEFKDWFCNPISGMVEGQEKVNKEVVDRLHNVLRPFILR 676
N+L ELWSL++FL+P +F S +F WF + G +K+ V+RLH VLRPF+LR
Sbjct: 341 NNLHELWSLLNFLLPDVFNSADDFDSWFD---TNNCLGDQKL----VERLHMVLRPFLLR 393
Query: 677 RLKRDVEKQLPMKQEHVIYCRLSKRQRNLYEDFIASS-ETQATLASANFFGMISVIMQLR 735
R+K DVEK LP K+E IY LSK QR Y + + + + +++++MQLR
Sbjct: 394 RIKADVEKSLPPKKEVKIYVGLSKMQREWYTRILMKDIDILNSAGKMDKMRLLNILMQLR 453
Query: 736 KVCNHPDLFEG 746
K CNHP LF+G
Sbjct: 454 KCCNHPYLFDG 464
Score = 422 (153.6 bits), Expect = 8.7e-104, Sum P(2) = 8.7e-104
Identities = 87/180 (48%), Positives = 117/180 (65%)
Query: 984 YFPDRRLIQFDCGKLQELAILLRKLKSDGHRALIFTQMTKMLDILEEFISLYGYTYMRLD 1043
Y D L+ + GK+ L LL KLK G R LIF+QMT++LDILE++ Y Y RLD
Sbjct: 471 YTTDMHLVT-NSGKMVVLDKLLPKLKEQGSRVLIFSQMTRVLDILEDYCMWRNYEYCRLD 529
Query: 1044 GSTQPEERQTLMQRFNT-NPKIFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQ 1102
G T +ERQ + +N N F+F+LSTR+GG+GINL AD VI YDSDWNP +D QA
Sbjct: 530 GQTPHDERQDSINAYNEPNSTKFVFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAM 589
Query: 1103 DRCHRIGQTREVHIYRLISESTIEENILKKANQKRALDDLVIQSGGYNTEFFKKLDPMEL 1162
DR HRIGQT+ V ++R I+++T+EE I+++A K LD +VIQ G + K+ E+
Sbjct: 590 DRAHRIGQTKTVRVFRFITDNTVEERIVERAEMKLRLDSIVIQQGRLVDQNLNKIGKDEM 649
>UNIPROTKB|P28370 [details] [associations]
symbol:SMARCA1 "Probable global transcription activator
SNF2L1" species:9606 "Homo sapiens" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0031491 "nucleosome binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0016589 "NURF complex" evidence=IDA]
[GO:0036310 "annealing helicase activity" evidence=IDA] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=IDA] [GO:0070615
"nucleosome-dependent ATPase activity" evidence=IDA] [GO:0090537
"CERF complex" evidence=IDA] [GO:0030182 "neuron differentiation"
evidence=ISS] [GO:0006338 "chromatin remodeling" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IDA] [GO:0007420 "brain development" evidence=IMP]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IMP] [GO:0006351 "transcription, DNA-dependent"
evidence=IMP] [GO:0000733 "DNA strand renaturation" evidence=IDA]
InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR009057 InterPro:IPR015194 InterPro:IPR015195
InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271 Pfam:PF09110
Pfam:PF09111 Pfam:PF13892 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 SMART:SM00717 GO:GO:0005524 GO:GO:0045893
GO:GO:0007420 GO:GO:0030182 GO:GO:0003677 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 GO:GO:0004386 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0031491 GO:GO:0043044
GO:GO:0016589 GO:GO:0036310 ChiTaRS:SMARCA1 SUPFAM:SSF101224
EMBL:AL138745 EMBL:M88163 EMBL:M89907 EMBL:AL022577 EMBL:BC117447
IPI:IPI00216046 IPI:IPI00646130 PIR:S35457 PIR:S35458
RefSeq:NP_003060.2 RefSeq:NP_620604.2 UniGene:Hs.152292
ProteinModelPortal:P28370 SMR:P28370 IntAct:P28370
MINT:MINT-2802155 STRING:P28370 PhosphoSite:P28370 DMDM:115311627
PaxDb:P28370 PRIDE:P28370 Ensembl:ENST00000371121
Ensembl:ENST00000371122 Ensembl:ENST00000371123 GeneID:6594
KEGG:hsa:6594 UCSC:uc004eun.4 UCSC:uc004eup.4 CTD:6594
GeneCards:GC0XM128580 HGNC:HGNC:11097 HPA:HPA003335 MIM:300012
neXtProt:NX_P28370 PharmGKB:PA35947 HOVERGEN:HBG056329
InParanoid:P28370 KO:K11727 OMA:PMSQKRK PhylomeDB:P28370
GenomeRNAi:6594 NextBio:25645 ArrayExpress:P28370 Bgee:P28370
CleanEx:HS_SMARCA1 Genevestigator:P28370 GermOnline:ENSG00000102038
Uniprot:P28370
Length = 1054
Score = 692 (248.7 bits), Expect = 9.9e-104, Sum P(3) = 9.9e-104
Identities = 132/294 (44%), Positives = 194/294 (65%)
Query: 454 PLREYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTIAMLAHLACEKGIWGPHLIVVPT 513
PLR+YQ GL+WL+++YE +NGILADEMGLGKT+ TIA+L +L + I GPH+++VP
Sbjct: 182 PLRDYQIRGLNWLISLYENGVNGILADEMGLGKTLQTIALLGYLKHYRNIPGPHMVLVPK 241
Query: 514 SVMLNWETEFLKWCPAFKILTYFGSAKERKFKRQGWLKPNSFHVCITTYRLIIQDSKVFK 573
S + NW EF +W P+ +++ + G R + + P + VC+T+Y ++I++ VFK
Sbjct: 242 STLHNWMNEFKRWVPSLRVICFVGDKDARAAFIRDEMMPGEWDVCVTSYEMVIKEKSVFK 301
Query: 574 RKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPLQNDLMELWSLMHFLMPHI 633
+ W+YL++DEAH IKN KS+ + + F S R+LLTGTPLQN+L ELW+L++FL+P +
Sbjct: 302 KFHWRYLVIDEAHRIKNEKSKLSEIVREFKSTNRLLLTGTPLQNNLHELWALLNFLLPDV 361
Query: 634 FQSHQEFKDWFCNPISGMVEGQEKVNKEVVDRLHNVLRPFILRRLKRDVEKQLPMKQEHV 693
F S +F WF + G +K+ V+RLH VL+PF+LRR+K DVEK LP K+E
Sbjct: 362 FNSADDFDSWF--DTKNCL-GDQKL----VERLHAVLKPFLLRRIKTDVEKSLPPKKEIK 414
Query: 694 IYCRLSKRQRNLYEDFIASS-ETQATLASANFFGMISVIMQLRKVCNHPDLFEG 746
IY LSK QR Y + + + + +++++MQLRK CNHP LF+G
Sbjct: 415 IYLGLSKMQREWYTKILMKDIDVLNSSGKMDKMRLLNILMQLRKCCNHPYLFDG 468
Score = 408 (148.7 bits), Expect = 9.9e-104, Sum P(3) = 9.9e-104
Identities = 92/192 (47%), Positives = 120/192 (62%)
Query: 984 YFPDRRLIQFDCGKLQELAILLRKLKSDGHRALIFTQMTKMLDILEEFISLYGYTYMRLD 1043
Y D ++ + GK+ L LL KLK G R LIF+QMT++LDILE++ GY Y RLD
Sbjct: 475 YTTDEHIVS-NSGKMVVLDKLLAKLKEQGSRVLIFSQMTRLLDILEDYCMWRGYEYCRLD 533
Query: 1044 GSTQPEERQT-------LMQR-----FNT-NPKIFLFILSTRSGGVGINLVGADTVIFYD 1090
G T EER+ L QR FN N F+F+LSTR+GG+GINL AD VI YD
Sbjct: 534 GQTPHEEREDKFLEVEFLGQREAIEAFNAPNSSKFIFMLSTRAGGLGINLASADVVILYD 593
Query: 1091 SDWNPAMDQQAQDRCHRIGQTREVHIYRLISESTIEENILKKANQKRALDDLVIQSGGYN 1150
SDWNP +D QA DR HRIGQ + V ++RLI+++T+EE I+++A K LD +VIQ G
Sbjct: 594 SDWNPQVDLQAMDRAHRIGQKKPVRVFRLITDNTVEERIVERAEIKLRLDSIVIQQGRLI 653
Query: 1151 TEFFKKLDPMEL 1162
+ KL E+
Sbjct: 654 DQQSNKLAKEEM 665
Score = 59 (25.8 bits), Expect = 9.9e-104, Sum P(3) = 9.9e-104
Identities = 23/80 (28%), Positives = 39/80 (48%)
Query: 28 KDVKKFWMKIE-KLVLYKHQMEVDVRKKKALD--KQLEFLLGQTERYSSMLAENLVDSHK 84
K+V F +K+ K + +M+ + +K D K+ EFLL QTE ++ + + S
Sbjct: 59 KNVSSFQLKLAAKAPKSEKEMDPEYEEKMKADRAKRFEFLLKQTELFAHFIQPSAQKS-- 116
Query: 85 PVQQSPMREQPGIQYKEADE 104
P SP+ + G + DE
Sbjct: 117 PT--SPLNMKLGRPRIKKDE 134
>UNIPROTKB|E1C0M8 [details] [associations]
symbol:SMARCA5 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004386 "helicase activity" evidence=IEA]
[GO:0031491 "nucleosome binding" evidence=IEA] [GO:0000183
"chromatin silencing at rDNA" evidence=IEA] [GO:0000793 "condensed
chromosome" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005677 "chromatin
silencing complex" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0006302 "double-strand break repair"
evidence=IEA] [GO:0006334 "nucleosome assembly" evidence=IEA]
[GO:0006352 "DNA-dependent transcription, initiation" evidence=IEA]
[GO:0009790 "embryo development" evidence=IEA] [GO:0016584
"nucleosome positioning" evidence=IEA] [GO:0016589 "NURF complex"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0031213 "RSF complex" evidence=IEA] [GO:0042393 "histone
binding" evidence=IEA] [GO:0043044 "ATP-dependent chromatin
remodeling" evidence=IEA] [GO:0043596 "nuclear replication fork"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001005
InterPro:IPR001650 InterPro:IPR009057 InterPro:IPR015194
InterPro:IPR015195 InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271
Pfam:PF09110 Pfam:PF09111 Pfam:PF13892 PROSITE:PS51194
SMART:SM00490 SMART:SM00717 GO:GO:0005524 GO:GO:0005730
GO:GO:0003677 GO:GO:0006352 GO:GO:0016887 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0043596 InterPro:IPR017884 PROSITE:PS51293
GO:GO:0000183 GO:GO:0006302 GO:GO:0004386 GO:GO:0000793
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0031491
GO:GO:0043044 GO:GO:0016584 GO:GO:0006334 GO:GO:0005677
GO:GO:0016589 GeneTree:ENSGT00680000100002 SUPFAM:SSF101224
OMA:EDYCHWR GO:GO:0031213 EMBL:AADN02016239 EMBL:AADN02016240
IPI:IPI00577188 Ensembl:ENSGALT00000016121 ArrayExpress:E1C0M8
Uniprot:E1C0M8
Length = 1038
Score = 691 (248.3 bits), Expect = 1.1e-103, Sum P(2) = 1.1e-103
Identities = 137/312 (43%), Positives = 202/312 (64%)
Query: 440 TTQVRTKF---PFLLKF-PLREYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTIAMLA 495
TT V T+F P +K+ LR+YQ GL+WL+++YE +NGILADEMGLGKT+ TI++L
Sbjct: 146 TTNVCTRFEESPSYVKWGKLRDYQVRGLNWLISLYENGINGILADEMGLGKTLQTISLLG 205
Query: 496 HLACEKGIWGPHLIVVPTSVMLNWETEFLKWCPAFKILTYFGSAKERKFKRQGWLKPNSF 555
++ + I GPH+++VP S + NW EF +W P + + G +R + L P +
Sbjct: 206 YMKHYRNIPGPHMVLVPKSTLHNWMNEFKRWVPTLRAVCLIGDKDQRAAFVRDVLLPGEW 265
Query: 556 HVCITTYRLIIQDSKVFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPL 615
VC+T+Y ++I++ VFK+ W+YL++DEAH IKN KS+ + + F + R+LLTGTPL
Sbjct: 266 DVCVTSYEMLIKEKSVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGTPL 325
Query: 616 QNDLMELWSLMHFLMPHIFQSHQEFKDWFCNPISGMVEGQEKVNKEVVDRLHNVLRPFIL 675
QN+L ELW+L++FL+P +F S ++F WF + G +K+ V+RLH VLRPF+L
Sbjct: 326 QNNLHELWALLNFLLPDVFNSSEDFDSWFD---TNNCLGDQKL----VERLHMVLRPFLL 378
Query: 676 RRLKRDVEKQLPMKQEHVIYCRLSKRQRNLYEDFIASS-ETQATLASANFFGMISVIMQL 734
RR+K DVEK LP K+E IY LSK QR Y + + + + +++++MQL
Sbjct: 379 RRIKADVEKSLPPKKEVKIYVGLSKMQREWYTRILMKDIDILNSAGKLDKMRLLNILMQL 438
Query: 735 RKVCNHPDLFEG 746
RK CNHP LF+G
Sbjct: 439 RKCCNHPYLFDG 450
Score = 420 (152.9 bits), Expect = 1.1e-103, Sum P(2) = 1.1e-103
Identities = 87/180 (48%), Positives = 116/180 (64%)
Query: 984 YFPDRRLIQFDCGKLQELAILLRKLKSDGHRALIFTQMTKMLDILEEFISLYGYTYMRLD 1043
Y D L+ + GK+ L LL KLK G R LIF+QMT++LDILE++ Y Y RLD
Sbjct: 457 YTTDMHLVT-NSGKMVVLDKLLPKLKEQGSRVLIFSQMTRVLDILEDYCMWRNYEYCRLD 515
Query: 1044 GSTQPEERQTLMQRFNT-NPKIFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQ 1102
G T +ERQ + +N F+F+LSTR+GG+GINL AD VI YDSDWNP +D QA
Sbjct: 516 GQTPHDERQASINAYNEPGSSKFVFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAM 575
Query: 1103 DRCHRIGQTREVHIYRLISESTIEENILKKANQKRALDDLVIQSGGYNTEFFKKLDPMEL 1162
DR HRIGQT+ V ++R I+++T+EE I+++A K LD +VIQ G + KL E+
Sbjct: 576 DRAHRIGQTKTVRVFRFITDNTVEERIVERAEMKLRLDSIVIQQGRLVDQNLNKLGKDEM 635
>UNIPROTKB|F1N166 [details] [associations]
symbol:SMARCA1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0036310 "annealing helicase
activity" evidence=IEA] [GO:0030182 "neuron differentiation"
evidence=IEA] [GO:0016589 "NURF complex" evidence=IEA] [GO:0008094
"DNA-dependent ATPase activity" evidence=IEA] [GO:0007420 "brain
development" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0043044 "ATP-dependent chromatin
remodeling" evidence=IEA] [GO:0031491 "nucleosome binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001005
InterPro:IPR001650 InterPro:IPR009057 InterPro:IPR015194
InterPro:IPR015195 InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271
Pfam:PF09110 Pfam:PF09111 Pfam:PF13892 PROSITE:PS51194
SMART:SM00490 SMART:SM00717 GO:GO:0005524 GO:GO:0045893
GO:GO:0007420 GO:GO:0030182 GO:GO:0003677 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0031491 GO:GO:0043044 GO:GO:0016589
GO:GO:0008094 GeneTree:ENSGT00680000100002 SUPFAM:SSF101224
OMA:PMSQKRK EMBL:DAAA02067438 EMBL:DAAA02067437 IPI:IPI01018574
Ensembl:ENSBTAT00000002973 Uniprot:F1N166
Length = 1078
Score = 698 (250.8 bits), Expect = 1.4e-103, Sum P(4) = 1.4e-103
Identities = 132/294 (44%), Positives = 196/294 (66%)
Query: 454 PLREYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTIAMLAHLACEKGIWGPHLIVVPT 513
PLR+YQ GL+WL+++YE +NGILADEMGLGKT+ TIA+L +L + I GPH+++VP
Sbjct: 185 PLRDYQIRGLNWLISLYENGVNGILADEMGLGKTLQTIALLGYLKHYRNIPGPHMVLVPK 244
Query: 514 SVMLNWETEFLKWCPAFKILTYFGSAKERKFKRQGWLKPNSFHVCITTYRLIIQDSKVFK 573
S + NW EF +W P+ +++ + G R + + P + VC+T+Y ++I++ VFK
Sbjct: 245 STLHNWMNEFKRWVPSLRVICFVGDKDARAAFIRDEMMPGEWDVCVTSYEMVIKEKSVFK 304
Query: 574 RKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPLQNDLMELWSLMHFLMPHI 633
+ W+YL++DEAH IKN KS+ + + +F S R+LLTGTPLQN+L ELW+L++FL+P +
Sbjct: 305 KFHWRYLVIDEAHRIKNEKSKLSEIVRDFKSTNRLLLTGTPLQNNLHELWALLNFLLPDV 364
Query: 634 FQSHQEFKDWFCNPISGMVEGQEKVNKEVVDRLHNVLRPFILRRLKRDVEKQLPMKQEHV 693
F S ++F WF + G +K+ V+RLH VL+PF+LRR+K DVEK LP K+E
Sbjct: 365 FNSAEDFDSWF--DTKNCL-GDQKL----VERLHTVLKPFLLRRIKTDVEKSLPPKKEIK 417
Query: 694 IYCRLSKRQRNLYEDFIASS-ETQATLASANFFGMISVIMQLRKVCNHPDLFEG 746
IY LSK QR Y + + + + +++++MQLRK CNHP LF+G
Sbjct: 418 IYLGLSKMQREWYTKILMKDIDVLNSAGKMDKMRLLNILMQLRKCCNHPYLFDG 471
Score = 277 (102.6 bits), Expect = 1.4e-103, Sum P(4) = 1.4e-103
Identities = 52/94 (55%), Positives = 70/94 (74%)
Query: 1055 MQRFNT-NPKIFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQDRCHRIGQTRE 1113
++ FN N F+F+LSTR+GG+GINL AD VI YDSDWNP +D QA DR HRIGQ +
Sbjct: 565 IEAFNIPNSSKFIFMLSTRAGGLGINLASADVVILYDSDWNPQVDLQAMDRAHRIGQKKP 624
Query: 1114 VHIYRLISESTIEENILKKANQKRALDDLVIQSG 1147
V ++RLI+++T+EE I+++A K LD +VIQ G
Sbjct: 625 VRVFRLITDNTVEERIVERAEIKLRLDSIVIQQG 658
Score = 167 (63.8 bits), Expect = 1.4e-103, Sum P(4) = 1.4e-103
Identities = 35/75 (46%), Positives = 48/75 (64%)
Query: 984 YFPDRRLIQFDCGKLQELAILLRKLKSDGHRALIFTQMTKMLDILEEFISLYGYTYMRLD 1043
Y D ++ + GK+ L LL KLK G R LIF+QMT++LDILE++ GY Y RLD
Sbjct: 478 YTTDEHIVS-NSGKMVVLDKLLAKLKEQGSRVLIFSQMTRLLDILEDYCMWRGYEYCRLD 536
Query: 1044 GSTQPEERQTLMQRF 1058
G T EER+ +++ F
Sbjct: 537 GQTPHEEREEILKDF 551
Score = 60 (26.2 bits), Expect = 1.4e-103, Sum P(4) = 1.4e-103
Identities = 25/102 (24%), Positives = 50/102 (49%)
Query: 28 KDVKKFWMKIE-KLVLYKHQMEVDVRKKKALD--KQLEFLLGQTERYSSMLAENLVDSHK 84
K+V F +K+ K + +M+ + +K D K+ EFLL QTE ++ + + S
Sbjct: 62 KNVSPFQLKLAVKASKSEKEMDPEYEEKMKADRAKRFEFLLKQTELFAHFIQPSAQKS-- 119
Query: 85 PVQQSPMREQPGI-QYKEADENGAEEPG-VQSKEADEDDAEQ 124
P SP+ + G + K+ D+ G + + ++++ E+
Sbjct: 120 PT--SPLNMKLGRPRIKKDDKQSLISVGDYRHRRTEQEEDEE 159
>UNIPROTKB|E2QVR5 [details] [associations]
symbol:SMARCA1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0043044 "ATP-dependent chromatin
remodeling" evidence=IEA] [GO:0031491 "nucleosome binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR009057 InterPro:IPR015194 InterPro:IPR015195
InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271 Pfam:PF09110
Pfam:PF09111 Pfam:PF13892 PROSITE:PS51194 SMART:SM00490
SMART:SM00717 GO:GO:0005524 GO:GO:0003677 Gene3D:1.10.10.60
SUPFAM:SSF46689 InterPro:IPR017884 PROSITE:PS51293 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0016585
GO:GO:0031491 GO:GO:0043044 SUPFAM:SSF101224
Ensembl:ENSCAFT00000029649 Uniprot:E2QVR5
Length = 1073
Score = 688 (247.2 bits), Expect = 1.8e-103, Sum P(3) = 1.8e-103
Identities = 132/295 (44%), Positives = 194/295 (65%)
Query: 454 PLREYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTIAMLAHLACEKGIWGPHLIVVPT 513
PLR+YQ GL+WL+++YE +NGILADEMGLGKT+ TIA+L +L + I GPH+++VP
Sbjct: 194 PLRDYQIRGLNWLISLYENGVNGILADEMGLGKTLQTIALLGYLKHYRNIPGPHMVLVPK 253
Query: 514 SVMLNWETEFLKWCPAFKILTYFGSAKERKFKRQGWLKPNSFHVCITTYRLIIQDSKVFK 573
S + NW EF +W P+ +++ + G R + + P + VC+T+Y ++I++ VFK
Sbjct: 254 STLYNWMNEFKRWVPSLRVICFVGDKDARAAFIRDEMMPGEWDVCVTSYEMVIKEKSVFK 313
Query: 574 RKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPLQNDLMELWSLMHFLMPHI 633
+ W+YL++DEAH IKN KS+ + + F S R+LLTGTPLQN+L ELW+L++FL+P +
Sbjct: 314 KFHWRYLVIDEAHRIKNEKSKLSEIVREFKSTNRLLLTGTPLQNNLHELWALLNFLLPDV 373
Query: 634 FQSHQEFKDWFCNPISGMVEGQEKVNKEVVDRLHNVLRPFILRRLKRDVEKQLPMKQEHV 693
F S +F WF + G +K+ V+RLH VL+PF+LRR+K DVEK LP K+E
Sbjct: 374 FNSADDFDSWF--DTKNCL-GDQKL----VERLHAVLKPFLLRRIKTDVEKSLPPKKEIK 426
Query: 694 IYCRLSKRQRNLYEDFIASSETQATLASANFFGM--ISVIMQLRKVCNHPDLFEG 746
+Y LSK QR + I + ++ M ++++MQLRK CNHP LF+G
Sbjct: 427 VYLGLSKMQREWWYTKILMKDIDVLNSAGKMDKMRLLNILMQLRKCCNHPYLFDG 481
Score = 425 (154.7 bits), Expect = 1.8e-103, Sum P(3) = 1.8e-103
Identities = 89/182 (48%), Positives = 119/182 (65%)
Query: 984 YFPDRRLIQFDCGKLQELAILLRKLKSDGHRALIFTQMTKMLDILEEFISLYGYTYMRLD 1043
Y D ++ + GK+ L LL KLK G R LIF+QMT++LDILE++ GY Y RLD
Sbjct: 488 YTTDEHIVS-NSGKMVVLDKLLAKLKEQGSRVLIFSQMTRLLDILEDYCMWRGYEYCRLD 546
Query: 1044 GSTQPEERQT--LMQRFNT-NPKIFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQ 1100
G T EER+ ++ FN N F+F+LSTR+GG+GINL AD VI YDSDWNP +D Q
Sbjct: 547 GQTPHEEREKKEAIEAFNAPNSSKFIFMLSTRAGGLGINLASADVVILYDSDWNPQVDLQ 606
Query: 1101 AQDRCHRIGQTREVHIYRLISESTIEENILKKANQKRALDDLVIQSGGYNTEFFKKLDPM 1160
A DR HRIGQ + V ++RLI+++T+EE I+++A K LD +VIQ G + KL
Sbjct: 607 AMDRAHRIGQKKPVRVFRLITDNTVEERIVERAEIKLRLDSIVIQQGRLIDQQSNKLAKE 666
Query: 1161 EL 1162
E+
Sbjct: 667 EM 668
Score = 46 (21.3 bits), Expect = 1.8e-103, Sum P(3) = 1.8e-103
Identities = 13/34 (38%), Positives = 22/34 (64%)
Query: 43 YKHQMEVDVRKKKA-LDKQLEFLLGQTERYSSML 75
Y+ +M V++ +KA K+ EFLL QTE ++ +
Sbjct: 86 YEEKM-VNIFLEKADRAKRFEFLLKQTELFAHFI 118
>RGD|1308832 [details] [associations]
symbol:Smarca5 "SWI/SNF related, matrix associated, actin
dependent regulator of chromatin, subfamily a, member 5"
species:10116 "Rattus norvegicus" [GO:0000183 "chromatin silencing
at rDNA" evidence=ISO] [GO:0000793 "condensed chromosome"
evidence=ISO] [GO:0003677 "DNA binding" evidence=IEA;ISO]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA;ISO] [GO:0005634 "nucleus" evidence=IEA;ISO]
[GO:0005677 "chromatin silencing complex" evidence=ISO] [GO:0005730
"nucleolus" evidence=ISO] [GO:0006200 "ATP catabolic process"
evidence=ISO] [GO:0006302 "double-strand break repair"
evidence=ISO] [GO:0006333 "chromatin assembly or disassembly"
evidence=ISO] [GO:0006334 "nucleosome assembly" evidence=ISO]
[GO:0006338 "chromatin remodeling" evidence=ISO] [GO:0006352
"DNA-dependent transcription, initiation" evidence=ISO] [GO:0009790
"embryo development" evidence=ISO] [GO:0016584 "nucleosome
positioning" evidence=ISO] [GO:0016589 "NURF complex" evidence=ISO]
[GO:0016887 "ATPase activity" evidence=ISO] [GO:0031213 "RSF
complex" evidence=ISO] [GO:0031491 "nucleosome binding"
evidence=IEA] [GO:0043044 "ATP-dependent chromatin remodeling"
evidence=IEA;ISO] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0043596 "nuclear
replication fork" evidence=ISO] [GO:0042393 "histone binding"
evidence=ISO] InterPro:IPR000330 InterPro:IPR001005
InterPro:IPR001650 InterPro:IPR009057 InterPro:IPR015194
InterPro:IPR015195 InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271
Pfam:PF09110 Pfam:PF09111 Pfam:PF13892 PROSITE:PS51194
SMART:SM00490 SMART:SM00717 RGD:1308832 GO:GO:0005524 GO:GO:0003677
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0016585 GO:GO:0031491 GO:GO:0043044
GeneTree:ENSGT00680000100002 SUPFAM:SSF101224 OMA:EDYCHWR
IPI:IPI00359419 PRIDE:F1LNL2 Ensembl:ENSRNOT00000024568
UCSC:RGD:1308832 ArrayExpress:F1LNL2 Uniprot:F1LNL2
Length = 1051
Score = 688 (247.2 bits), Expect = 2.0e-103, Sum P(2) = 2.0e-103
Identities = 137/311 (44%), Positives = 202/311 (64%)
Query: 441 TQVRTKF---PFLLKF-PLREYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTIAMLAH 496
T V T+F P +K+ LR+YQ GL+WL+++YE +NGILADEMGLGKT+ TI++L +
Sbjct: 161 TNVCTRFEDSPSYVKWGKLRDYQVRGLNWLISLYENGINGILADEMGLGKTLQTISLLGY 220
Query: 497 LACEKGIWGPHLIVVPTSVMLNWETEFLKWCPAFKILTYFGSAKERKFKRQGWLKPNSFH 556
+ + I GPH+++VP S + NW +EF +W P + + G ++R + L P +
Sbjct: 221 MKHYRNIPGPHMVLVPKSTLHNWMSEFKRWVPTLRSVCLIGDKEQRAAFVRDVLLPGEWD 280
Query: 557 VCITTYRLIIQDSKVFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPLQ 616
VC+T+Y ++I++ VFK+ W+YL++DEAH IKN KS+ + + F + R+LLTGTPLQ
Sbjct: 281 VCVTSYEMLIKEKSVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGTPLQ 340
Query: 617 NDLMELWSLMHFLMPHIFQSHQEFKDWFCNPISGMVEGQEKVNKEVVDRLHNVLRPFILR 676
N+L ELWSL++FL+P +F S +F WF + G +K+ V+RLH VLRPF+LR
Sbjct: 341 NNLHELWSLLNFLLPDVFNSADDFDSWFD---TNNCLGDQKL----VERLHMVLRPFLLR 393
Query: 677 RLKRDVEKQLPMKQEHVIYCRLSKRQRNLYEDFIASS-ETQATLASANFFGMISVIMQLR 735
R+K DVEK LP K+E IY LSK QR Y + + + + +++++MQLR
Sbjct: 394 RIKADVEKSLPPKKEVKIYVGLSKMQREWYTRILMKDIDILNSAGKMDKMRLLNILMQLR 453
Query: 736 KVCNHPDLFEG 746
K CNHP LF+G
Sbjct: 454 KCCNHPYLFDG 464
Score = 422 (153.6 bits), Expect = 2.0e-103, Sum P(2) = 2.0e-103
Identities = 87/180 (48%), Positives = 117/180 (65%)
Query: 984 YFPDRRLIQFDCGKLQELAILLRKLKSDGHRALIFTQMTKMLDILEEFISLYGYTYMRLD 1043
Y D L+ + GK+ L LL KLK G R LIF+QMT++LDILE++ Y Y RLD
Sbjct: 471 YTTDMHLVT-NSGKMVVLDKLLPKLKEQGSRVLIFSQMTRVLDILEDYCMWRNYEYCRLD 529
Query: 1044 GSTQPEERQTLMQRFNT-NPKIFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQ 1102
G T +ERQ + +N N F+F+LSTR+GG+GINL AD VI YDSDWNP +D QA
Sbjct: 530 GQTPHDERQDSINAYNEPNSTKFVFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAM 589
Query: 1103 DRCHRIGQTREVHIYRLISESTIEENILKKANQKRALDDLVIQSGGYNTEFFKKLDPMEL 1162
DR HRIGQT+ V ++R I+++T+EE I+++A K LD +VIQ G + K+ E+
Sbjct: 590 DRAHRIGQTKTVRVFRFITDNTVEERIVERAEMKLRLDSIVIQQGRLVDQNLNKIGKDEM 649
>UNIPROTKB|F1N052 [details] [associations]
symbol:SMARCA5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0043596 "nuclear replication fork" evidence=IEA]
[GO:0043044 "ATP-dependent chromatin remodeling" evidence=IEA]
[GO:0042393 "histone binding" evidence=IEA] [GO:0031213 "RSF
complex" evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0016589 "NURF complex" evidence=IEA] [GO:0016584 "nucleosome
positioning" evidence=IEA] [GO:0009790 "embryo development"
evidence=IEA] [GO:0006352 "DNA-dependent transcription, initiation"
evidence=IEA] [GO:0006334 "nucleosome assembly" evidence=IEA]
[GO:0006302 "double-strand break repair" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0005677 "chromatin silencing complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA] [GO:0000793 "condensed chromosome"
evidence=IEA] [GO:0000183 "chromatin silencing at rDNA"
evidence=IEA] [GO:0031491 "nucleosome binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] InterPro:IPR000330
InterPro:IPR001005 InterPro:IPR001650 InterPro:IPR009057
InterPro:IPR015194 InterPro:IPR015195 InterPro:IPR020838
Pfam:PF00176 Pfam:PF00271 Pfam:PF09110 Pfam:PF09111 Pfam:PF13892
PROSITE:PS51194 SMART:SM00490 SMART:SM00717 GO:GO:0005524
GO:GO:0005730 GO:GO:0003677 GO:GO:0006352 GO:GO:0016887
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009790 GO:GO:0043596
InterPro:IPR017884 PROSITE:PS51293 GO:GO:0000183 GO:GO:0006302
GO:GO:0004386 GO:GO:0000793 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0031491 GO:GO:0043044 GO:GO:0016584
GO:GO:0006334 GO:GO:0005677 GO:GO:0016589
GeneTree:ENSGT00680000100002 SUPFAM:SSF101224 OMA:EDYCHWR
GO:GO:0031213 EMBL:DAAA02044371 IPI:IPI00868566 UniGene:Bt.103096
Ensembl:ENSBTAT00000004408 Uniprot:F1N052
Length = 1052
Score = 688 (247.2 bits), Expect = 2.0e-103, Sum P(2) = 2.0e-103
Identities = 137/311 (44%), Positives = 202/311 (64%)
Query: 441 TQVRTKF---PFLLKF-PLREYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTIAMLAH 496
T V T+F P +K+ LR+YQ GL+WL+++YE +NGILADEMGLGKT+ TI++L +
Sbjct: 162 TNVCTRFEDSPSYVKWGKLRDYQVRGLNWLISLYENGINGILADEMGLGKTLQTISLLGY 221
Query: 497 LACEKGIWGPHLIVVPTSVMLNWETEFLKWCPAFKILTYFGSAKERKFKRQGWLKPNSFH 556
+ + I GPH+++VP S + NW +EF +W P + + G ++R + L P +
Sbjct: 222 MKHYRNIPGPHMVLVPKSTLHNWMSEFKRWVPTLRSVCLIGDKEQRAAFVRDVLLPGEWD 281
Query: 557 VCITTYRLIIQDSKVFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPLQ 616
VC+T+Y ++I++ VFK+ W+YL++DEAH IKN KS+ + + F + R+LLTGTPLQ
Sbjct: 282 VCVTSYEMLIKEKSVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGTPLQ 341
Query: 617 NDLMELWSLMHFLMPHIFQSHQEFKDWFCNPISGMVEGQEKVNKEVVDRLHNVLRPFILR 676
N+L ELWSL++FL+P +F S +F WF + G +K+ V+RLH VLRPF+LR
Sbjct: 342 NNLHELWSLLNFLLPDVFNSADDFDSWFD---TNNCLGDQKL----VERLHMVLRPFLLR 394
Query: 677 RLKRDVEKQLPMKQEHVIYCRLSKRQRNLYEDFIASS-ETQATLASANFFGMISVIMQLR 735
R+K DVEK LP K+E IY LSK QR Y + + + + +++++MQLR
Sbjct: 395 RIKADVEKSLPPKKEVKIYVGLSKMQREWYTRILMKDIDILNSAGKMDKMRLLNILMQLR 454
Query: 736 KVCNHPDLFEG 746
K CNHP LF+G
Sbjct: 455 KCCNHPYLFDG 465
Score = 422 (153.6 bits), Expect = 2.0e-103, Sum P(2) = 2.0e-103
Identities = 87/180 (48%), Positives = 117/180 (65%)
Query: 984 YFPDRRLIQFDCGKLQELAILLRKLKSDGHRALIFTQMTKMLDILEEFISLYGYTYMRLD 1043
Y D L+ + GK+ L LL KLK G R LIF+QMT++LDILE++ Y Y RLD
Sbjct: 472 YTTDMHLVT-NSGKMVVLDKLLPKLKEQGSRVLIFSQMTRVLDILEDYCMWRNYEYCRLD 530
Query: 1044 GSTQPEERQTLMQRFNT-NPKIFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQ 1102
G T +ERQ + +N N F+F+LSTR+GG+GINL AD VI YDSDWNP +D QA
Sbjct: 531 GQTPHDERQESINAYNEPNSTKFVFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAM 590
Query: 1103 DRCHRIGQTREVHIYRLISESTIEENILKKANQKRALDDLVIQSGGYNTEFFKKLDPMEL 1162
DR HRIGQT+ V ++R I+++T+EE I+++A K LD +VIQ G + K+ E+
Sbjct: 591 DRAHRIGQTKTVRVFRFITDNTVEERIVERAEMKLRLDSIVIQQGRLVDQNLNKIGKDEM 650
>UNIPROTKB|E2QWV0 [details] [associations]
symbol:SMARCA5 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0043596 "nuclear replication fork"
evidence=IEA] [GO:0043044 "ATP-dependent chromatin remodeling"
evidence=IEA] [GO:0042393 "histone binding" evidence=IEA]
[GO:0031213 "RSF complex" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=IEA] [GO:0016589 "NURF complex" evidence=IEA]
[GO:0016584 "nucleosome positioning" evidence=IEA] [GO:0009790
"embryo development" evidence=IEA] [GO:0006352 "DNA-dependent
transcription, initiation" evidence=IEA] [GO:0006334 "nucleosome
assembly" evidence=IEA] [GO:0006302 "double-strand break repair"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0005677
"chromatin silencing complex" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0000793 "condensed chromosome" evidence=IEA] [GO:0000183
"chromatin silencing at rDNA" evidence=IEA] [GO:0031491 "nucleosome
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001005
InterPro:IPR001650 InterPro:IPR009057 InterPro:IPR015194
InterPro:IPR015195 InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271
Pfam:PF09110 Pfam:PF09111 Pfam:PF13892 PROSITE:PS51194
SMART:SM00490 SMART:SM00717 GO:GO:0005524 GO:GO:0005730
GO:GO:0003677 GO:GO:0006352 GO:GO:0016887 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0009790 GO:GO:0043596 InterPro:IPR017884
PROSITE:PS51293 GO:GO:0000183 GO:GO:0006302 GO:GO:0004386
GO:GO:0000793 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0031491 GO:GO:0043044 GO:GO:0016584 GO:GO:0006334
GO:GO:0005677 GO:GO:0016589 GeneTree:ENSGT00680000100002 KO:K11654
SUPFAM:SSF101224 OMA:EDYCHWR GO:GO:0031213 CTD:8467
EMBL:AAEX03010002 RefSeq:XP_532676.1 ProteinModelPortal:E2QWV0
Ensembl:ENSCAFT00000012062 GeneID:475451 KEGG:cfa:475451
NextBio:20851293 Uniprot:E2QWV0
Length = 1052
Score = 688 (247.2 bits), Expect = 2.0e-103, Sum P(2) = 2.0e-103
Identities = 137/311 (44%), Positives = 202/311 (64%)
Query: 441 TQVRTKF---PFLLKF-PLREYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTIAMLAH 496
T V T+F P +K+ LR+YQ GL+WL+++YE +NGILADEMGLGKT+ TI++L +
Sbjct: 162 TNVCTRFEDSPSYVKWGKLRDYQVRGLNWLISLYENGINGILADEMGLGKTLQTISLLGY 221
Query: 497 LACEKGIWGPHLIVVPTSVMLNWETEFLKWCPAFKILTYFGSAKERKFKRQGWLKPNSFH 556
+ + I GPH+++VP S + NW +EF +W P + + G ++R + L P +
Sbjct: 222 MKHYRNIPGPHMVLVPKSTLHNWMSEFKRWVPTLRSVCLIGDKEQRAAFVRDVLLPGEWD 281
Query: 557 VCITTYRLIIQDSKVFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPLQ 616
VC+T+Y ++I++ VFK+ W+YL++DEAH IKN KS+ + + F + R+LLTGTPLQ
Sbjct: 282 VCVTSYEMLIKEKSVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGTPLQ 341
Query: 617 NDLMELWSLMHFLMPHIFQSHQEFKDWFCNPISGMVEGQEKVNKEVVDRLHNVLRPFILR 676
N+L ELWSL++FL+P +F S +F WF + G +K+ V+RLH VLRPF+LR
Sbjct: 342 NNLHELWSLLNFLLPDVFNSADDFDSWFD---TNNCLGDQKL----VERLHMVLRPFLLR 394
Query: 677 RLKRDVEKQLPMKQEHVIYCRLSKRQRNLYEDFIASS-ETQATLASANFFGMISVIMQLR 735
R+K DVEK LP K+E IY LSK QR Y + + + + +++++MQLR
Sbjct: 395 RIKADVEKSLPPKKEVKIYVGLSKMQREWYTRILMKDIDILNSAGKMDKMRLLNILMQLR 454
Query: 736 KVCNHPDLFEG 746
K CNHP LF+G
Sbjct: 455 KCCNHPYLFDG 465
Score = 422 (153.6 bits), Expect = 2.0e-103, Sum P(2) = 2.0e-103
Identities = 87/180 (48%), Positives = 117/180 (65%)
Query: 984 YFPDRRLIQFDCGKLQELAILLRKLKSDGHRALIFTQMTKMLDILEEFISLYGYTYMRLD 1043
Y D L+ + GK+ L LL KLK G R LIF+QMT++LDILE++ Y Y RLD
Sbjct: 472 YTTDMHLVT-NSGKMVVLDKLLPKLKEQGSRVLIFSQMTRVLDILEDYCMWRNYEYCRLD 530
Query: 1044 GSTQPEERQTLMQRFNT-NPKIFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQ 1102
G T +ERQ + +N N F+F+LSTR+GG+GINL AD VI YDSDWNP +D QA
Sbjct: 531 GQTPHDERQESINAYNEPNSTKFVFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAM 590
Query: 1103 DRCHRIGQTREVHIYRLISESTIEENILKKANQKRALDDLVIQSGGYNTEFFKKLDPMEL 1162
DR HRIGQT+ V ++R I+++T+EE I+++A K LD +VIQ G + K+ E+
Sbjct: 591 DRAHRIGQTKTVRVFRFITDNTVEERIVERAEMKLRLDSIVIQQGRLVDQNLNKIGKDEM 650
>UNIPROTKB|F1RRG9 [details] [associations]
symbol:SMARCA5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043596 "nuclear replication fork" evidence=IEA]
[GO:0043044 "ATP-dependent chromatin remodeling" evidence=IEA]
[GO:0042393 "histone binding" evidence=IEA] [GO:0031213 "RSF
complex" evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0016589 "NURF complex" evidence=IEA] [GO:0016584 "nucleosome
positioning" evidence=IEA] [GO:0009790 "embryo development"
evidence=IEA] [GO:0006352 "DNA-dependent transcription, initiation"
evidence=IEA] [GO:0006334 "nucleosome assembly" evidence=IEA]
[GO:0006302 "double-strand break repair" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0005677 "chromatin silencing complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA] [GO:0000793 "condensed chromosome"
evidence=IEA] [GO:0000183 "chromatin silencing at rDNA"
evidence=IEA] [GO:0031491 "nucleosome binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] InterPro:IPR000330
InterPro:IPR001005 InterPro:IPR001650 InterPro:IPR009057
InterPro:IPR015194 InterPro:IPR015195 InterPro:IPR020838
Pfam:PF00176 Pfam:PF00271 Pfam:PF09110 Pfam:PF09111 Pfam:PF13892
PROSITE:PS51194 SMART:SM00490 SMART:SM00717 GO:GO:0005524
GO:GO:0005730 GO:GO:0003677 GO:GO:0006352 GO:GO:0016887
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009790 GO:GO:0043596
InterPro:IPR017884 PROSITE:PS51293 GO:GO:0000183 GO:GO:0006302
GO:GO:0004386 GO:GO:0000793 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0031491 GO:GO:0043044 GO:GO:0016584
GO:GO:0006334 GO:GO:0005677 GO:GO:0016589
GeneTree:ENSGT00680000100002 KO:K11654 SUPFAM:SSF101224 OMA:EDYCHWR
GO:GO:0031213 CTD:8467 EMBL:CU463195 RefSeq:XP_003129222.2
UniGene:Ssc.97261 Ensembl:ENSSSCT00000009907 GeneID:100188903
KEGG:ssc:100188903 ArrayExpress:F1RRG9 Uniprot:F1RRG9
Length = 1052
Score = 688 (247.2 bits), Expect = 2.0e-103, Sum P(2) = 2.0e-103
Identities = 137/311 (44%), Positives = 202/311 (64%)
Query: 441 TQVRTKF---PFLLKF-PLREYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTIAMLAH 496
T V T+F P +K+ LR+YQ GL+WL+++YE +NGILADEMGLGKT+ TI++L +
Sbjct: 162 TNVCTRFEDSPSYVKWGKLRDYQVRGLNWLISLYENGINGILADEMGLGKTLQTISLLGY 221
Query: 497 LACEKGIWGPHLIVVPTSVMLNWETEFLKWCPAFKILTYFGSAKERKFKRQGWLKPNSFH 556
+ + I GPH+++VP S + NW +EF +W P + + G ++R + L P +
Sbjct: 222 MKHYRNIPGPHMVLVPKSTLHNWMSEFKRWVPTLRSVCLIGDKEQRAAFVRDVLLPGEWD 281
Query: 557 VCITTYRLIIQDSKVFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPLQ 616
VC+T+Y ++I++ VFK+ W+YL++DEAH IKN KS+ + + F + R+LLTGTPLQ
Sbjct: 282 VCVTSYEMLIKEKSVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGTPLQ 341
Query: 617 NDLMELWSLMHFLMPHIFQSHQEFKDWFCNPISGMVEGQEKVNKEVVDRLHNVLRPFILR 676
N+L ELWSL++FL+P +F S +F WF + G +K+ V+RLH VLRPF+LR
Sbjct: 342 NNLHELWSLLNFLLPDVFNSADDFDSWFD---TNNCLGDQKL----VERLHMVLRPFLLR 394
Query: 677 RLKRDVEKQLPMKQEHVIYCRLSKRQRNLYEDFIASS-ETQATLASANFFGMISVIMQLR 735
R+K DVEK LP K+E IY LSK QR Y + + + + +++++MQLR
Sbjct: 395 RIKADVEKSLPPKKEVKIYVGLSKMQREWYTRILMKDIDILNSAGKMDKMRLLNILMQLR 454
Query: 736 KVCNHPDLFEG 746
K CNHP LF+G
Sbjct: 455 KCCNHPYLFDG 465
Score = 422 (153.6 bits), Expect = 2.0e-103, Sum P(2) = 2.0e-103
Identities = 87/180 (48%), Positives = 117/180 (65%)
Query: 984 YFPDRRLIQFDCGKLQELAILLRKLKSDGHRALIFTQMTKMLDILEEFISLYGYTYMRLD 1043
Y D L+ + GK+ L LL KLK G R LIF+QMT++LDILE++ Y Y RLD
Sbjct: 472 YTTDMHLVT-NSGKMVVLDKLLPKLKEQGSRVLIFSQMTRVLDILEDYCMWRNYEYCRLD 530
Query: 1044 GSTQPEERQTLMQRFNT-NPKIFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQ 1102
G T +ERQ + +N N F+F+LSTR+GG+GINL AD VI YDSDWNP +D QA
Sbjct: 531 GQTPHDERQESINAYNEPNSTKFVFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAM 590
Query: 1103 DRCHRIGQTREVHIYRLISESTIEENILKKANQKRALDDLVIQSGGYNTEFFKKLDPMEL 1162
DR HRIGQT+ V ++R I+++T+EE I+++A K LD +VIQ G + K+ E+
Sbjct: 591 DRAHRIGQTKTVRVFRFITDNTVEERIVERAEMKLRLDSIVIQQGRLVDQNLNKIGKDEM 650
>UNIPROTKB|K7GMM0 [details] [associations]
symbol:SMARCA1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=IEA] [GO:0031491
"nucleosome binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR000330
InterPro:IPR001005 InterPro:IPR001650 InterPro:IPR009057
InterPro:IPR015194 InterPro:IPR015195 InterPro:IPR020838
Pfam:PF00176 Pfam:PF00271 Pfam:PF09110 Pfam:PF09111 Pfam:PF13892
PROSITE:PS51194 SMART:SM00490 SMART:SM00717 Gene3D:1.10.10.60
SUPFAM:SSF46689 InterPro:IPR017884 PROSITE:PS51293
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00680000100002 SUPFAM:SSF101224 EMBL:CU695129
GeneID:100188905 RefSeq:XP_003360491.1 Ensembl:ENSSSCT00000034062
Uniprot:K7GMM0
Length = 1057
Score = 693 (249.0 bits), Expect = 2.1e-103, Sum P(3) = 2.1e-103
Identities = 132/294 (44%), Positives = 194/294 (65%)
Query: 454 PLREYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTIAMLAHLACEKGIWGPHLIVVPT 513
PLR+YQ GL+WL+++YE +NGILADEMGLGKT+ TIA+L +L + I GPH+++VP
Sbjct: 185 PLRDYQIRGLNWLISLYENGVNGILADEMGLGKTLQTIALLGYLKHYRNIPGPHMVLVPK 244
Query: 514 SVMLNWETEFLKWCPAFKILTYFGSAKERKFKRQGWLKPNSFHVCITTYRLIIQDSKVFK 573
S + NW EF +W P+ +++ + G R + + P + VC+T+Y ++I++ VFK
Sbjct: 245 STLHNWMNEFKRWVPSLRVICFVGDKDARAAFIRDEMMPGEWDVCVTSYEMVIKEKSVFK 304
Query: 574 RKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPLQNDLMELWSLMHFLMPHI 633
+ W+YL++DEAH IKN KS+ + + F S R+LLTGTPLQN+L ELW+L++FL+P +
Sbjct: 305 KFHWRYLVIDEAHRIKNEKSKLSEIVREFKSTNRLLLTGTPLQNNLHELWALLNFLLPDV 364
Query: 634 FQSHQEFKDWFCNPISGMVEGQEKVNKEVVDRLHNVLRPFILRRLKRDVEKQLPMKQEHV 693
F S +F WF + G +K+ V+RLH VL+PF+LRR+K DVEK LP K+E
Sbjct: 365 FNSADDFDSWF--DTKNCL-GDQKL----VERLHAVLKPFLLRRIKTDVEKSLPPKKEIK 417
Query: 694 IYCRLSKRQRNLYEDFIASS-ETQATLASANFFGMISVIMQLRKVCNHPDLFEG 746
IY LSK QR Y + + + + +++++MQLRK CNHP LF+G
Sbjct: 418 IYLGLSKMQREWYTKILMKDIDVLNSAGKMDKMRLLNILMQLRKCCNHPYLFDG 471
Score = 407 (148.3 bits), Expect = 2.1e-103, Sum P(3) = 2.1e-103
Identities = 89/177 (50%), Positives = 115/177 (64%)
Query: 984 YFPDRRLIQFDCGKLQELAILLRKLKSDGHRALIFTQMTKMLDILEEFISLYGYTYMRLD 1043
Y D ++ + GK+ L LL KLK G R LIF+QMT++LDILE++ GY Y RLD
Sbjct: 478 YTTDEHIVS-NSGKMVVLDKLLAKLKEQGSRVLIFSQMTRLLDILEDYCMWRGYEYCRLD 536
Query: 1044 GSTQPEERQT-------LMQR-----FNT-NPKIFLFILSTRSGGVGINLVGADTVIFYD 1090
G T EER+ L QR FN N F+F+LSTR+GG+GINL AD VI YD
Sbjct: 537 GQTPHEEREDKFLEVELLGQREAIEAFNVPNSSRFIFMLSTRAGGLGINLASADVVILYD 596
Query: 1091 SDWNPAMDQQAQDRCHRIGQTREVHIYRLISESTIEENILKKANQKRALDDLVIQSG 1147
SDWNP +D QA DR HRIGQ + V ++RLI+++T+EE I+++A K LD +VIQ G
Sbjct: 597 SDWNPQVDLQAMDRAHRIGQKKPVRVFRLITDNTVEERIVERAEIKLRLDSIVIQQG 653
Score = 56 (24.8 bits), Expect = 2.1e-103, Sum P(3) = 2.1e-103
Identities = 24/102 (23%), Positives = 49/102 (48%)
Query: 28 KDVKKFWMKIE-KLVLYKHQMEVDVRKKKALD--KQLEFLLGQTERYSSMLAENLVDSHK 84
K+ F +K+ K + +M+ + +K D K+ EFLL QTE ++ + + S
Sbjct: 62 KNASPFQLKLAAKASKSEKEMDPEYEEKMKADRAKRFEFLLKQTELFAHFIQPSAQKS-- 119
Query: 85 PVQQSPMREQPGI-QYKEADENGAEEPG-VQSKEADEDDAEQ 124
P SP+ + G + K+ D+ G + + ++++ E+
Sbjct: 120 PT--SPLNIKLGRPRIKKDDKQSLISAGDYRHRRTEQEEDEE 159
>UNIPROTKB|K7GLQ2 [details] [associations]
symbol:SMARCA1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=IEA] [GO:0031491
"nucleosome binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR000330
InterPro:IPR001005 InterPro:IPR001650 InterPro:IPR009057
InterPro:IPR015194 InterPro:IPR015195 InterPro:IPR020838
Pfam:PF00176 Pfam:PF00271 Pfam:PF09110 Pfam:PF09111 Pfam:PF13892
PROSITE:PS51194 SMART:SM00490 SMART:SM00717 Gene3D:1.10.10.60
SUPFAM:SSF46689 InterPro:IPR017884 PROSITE:PS51293
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00680000100002 SUPFAM:SSF101224 EMBL:CU695129
RefSeq:XP_003135410.1 Ensembl:ENSSSCT00000033549 GeneID:100188905
Uniprot:K7GLQ2
Length = 1073
Score = 693 (249.0 bits), Expect = 3.1e-103, Sum P(3) = 3.1e-103
Identities = 132/294 (44%), Positives = 194/294 (65%)
Query: 454 PLREYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTIAMLAHLACEKGIWGPHLIVVPT 513
PLR+YQ GL+WL+++YE +NGILADEMGLGKT+ TIA+L +L + I GPH+++VP
Sbjct: 185 PLRDYQIRGLNWLISLYENGVNGILADEMGLGKTLQTIALLGYLKHYRNIPGPHMVLVPK 244
Query: 514 SVMLNWETEFLKWCPAFKILTYFGSAKERKFKRQGWLKPNSFHVCITTYRLIIQDSKVFK 573
S + NW EF +W P+ +++ + G R + + P + VC+T+Y ++I++ VFK
Sbjct: 245 STLHNWMNEFKRWVPSLRVICFVGDKDARAAFIRDEMMPGEWDVCVTSYEMVIKEKSVFK 304
Query: 574 RKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPLQNDLMELWSLMHFLMPHI 633
+ W+YL++DEAH IKN KS+ + + F S R+LLTGTPLQN+L ELW+L++FL+P +
Sbjct: 305 KFHWRYLVIDEAHRIKNEKSKLSEIVREFKSTNRLLLTGTPLQNNLHELWALLNFLLPDV 364
Query: 634 FQSHQEFKDWFCNPISGMVEGQEKVNKEVVDRLHNVLRPFILRRLKRDVEKQLPMKQEHV 693
F S +F WF + G +K+ V+RLH VL+PF+LRR+K DVEK LP K+E
Sbjct: 365 FNSADDFDSWF--DTKNCL-GDQKL----VERLHAVLKPFLLRRIKTDVEKSLPPKKEIK 417
Query: 694 IYCRLSKRQRNLYEDFIASS-ETQATLASANFFGMISVIMQLRKVCNHPDLFEG 746
IY LSK QR Y + + + + +++++MQLRK CNHP LF+G
Sbjct: 418 IYLGLSKMQREWYTKILMKDIDVLNSAGKMDKMRLLNILMQLRKCCNHPYLFDG 471
Score = 407 (148.3 bits), Expect = 3.1e-103, Sum P(3) = 3.1e-103
Identities = 89/177 (50%), Positives = 115/177 (64%)
Query: 984 YFPDRRLIQFDCGKLQELAILLRKLKSDGHRALIFTQMTKMLDILEEFISLYGYTYMRLD 1043
Y D ++ + GK+ L LL KLK G R LIF+QMT++LDILE++ GY Y RLD
Sbjct: 478 YTTDEHIVS-NSGKMVVLDKLLAKLKEQGSRVLIFSQMTRLLDILEDYCMWRGYEYCRLD 536
Query: 1044 GSTQPEERQT-------LMQR-----FNT-NPKIFLFILSTRSGGVGINLVGADTVIFYD 1090
G T EER+ L QR FN N F+F+LSTR+GG+GINL AD VI YD
Sbjct: 537 GQTPHEEREDKFLEVELLGQREAIEAFNVPNSSRFIFMLSTRAGGLGINLASADVVILYD 596
Query: 1091 SDWNPAMDQQAQDRCHRIGQTREVHIYRLISESTIEENILKKANQKRALDDLVIQSG 1147
SDWNP +D QA DR HRIGQ + V ++RLI+++T+EE I+++A K LD +VIQ G
Sbjct: 597 SDWNPQVDLQAMDRAHRIGQKKPVRVFRLITDNTVEERIVERAEIKLRLDSIVIQQG 653
Score = 56 (24.8 bits), Expect = 3.1e-103, Sum P(3) = 3.1e-103
Identities = 24/102 (23%), Positives = 49/102 (48%)
Query: 28 KDVKKFWMKIE-KLVLYKHQMEVDVRKKKALD--KQLEFLLGQTERYSSMLAENLVDSHK 84
K+ F +K+ K + +M+ + +K D K+ EFLL QTE ++ + + S
Sbjct: 62 KNASPFQLKLAAKASKSEKEMDPEYEEKMKADRAKRFEFLLKQTELFAHFIQPSAQKS-- 119
Query: 85 PVQQSPMREQPGI-QYKEADENGAEEPG-VQSKEADEDDAEQ 124
P SP+ + G + K+ D+ G + + ++++ E+
Sbjct: 120 PT--SPLNIKLGRPRIKKDDKQSLISAGDYRHRRTEQEEDEE 159
>UNIPROTKB|F1RTI9 [details] [associations]
symbol:SMARCA1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0036310 "annealing helicase
activity" evidence=IEA] [GO:0030182 "neuron differentiation"
evidence=IEA] [GO:0016589 "NURF complex" evidence=IEA] [GO:0008094
"DNA-dependent ATPase activity" evidence=IEA] [GO:0007420 "brain
development" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0043044 "ATP-dependent chromatin
remodeling" evidence=IEA] [GO:0031491 "nucleosome binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001005
InterPro:IPR001650 InterPro:IPR009057 InterPro:IPR015194
InterPro:IPR015195 InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271
Pfam:PF09110 Pfam:PF09111 Pfam:PF13892 PROSITE:PS51194
SMART:SM00490 SMART:SM00717 GO:GO:0005524 GO:GO:0045893
GO:GO:0007420 GO:GO:0030182 GO:GO:0003677 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0031491 GO:GO:0043044 GO:GO:0016589
GO:GO:0008094 GeneTree:ENSGT00680000100002 SUPFAM:SSF101224
OMA:PMSQKRK EMBL:CU695129 Ensembl:ENSSSCT00000013830 Uniprot:F1RTI9
Length = 1073
Score = 693 (249.0 bits), Expect = 5.1e-103, Sum P(3) = 5.1e-103
Identities = 132/294 (44%), Positives = 194/294 (65%)
Query: 454 PLREYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTIAMLAHLACEKGIWGPHLIVVPT 513
PLR+YQ GL+WL+++YE +NGILADEMGLGKT+ TIA+L +L + I GPH+++VP
Sbjct: 185 PLRDYQIRGLNWLISLYENGVNGILADEMGLGKTLQTIALLGYLKHYRNIPGPHMVLVPK 244
Query: 514 SVMLNWETEFLKWCPAFKILTYFGSAKERKFKRQGWLKPNSFHVCITTYRLIIQDSKVFK 573
S + NW EF +W P+ +++ + G R + + P + VC+T+Y ++I++ VFK
Sbjct: 245 STLHNWMNEFKRWVPSLRVICFVGDKDARAAFIRDEMMPGEWDVCVTSYEMVIKEKSVFK 304
Query: 574 RKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPLQNDLMELWSLMHFLMPHI 633
+ W+YL++DEAH IKN KS+ + + F S R+LLTGTPLQN+L ELW+L++FL+P +
Sbjct: 305 KFHWRYLVIDEAHRIKNEKSKLSEIVREFKSTNRLLLTGTPLQNNLHELWALLNFLLPDV 364
Query: 634 FQSHQEFKDWFCNPISGMVEGQEKVNKEVVDRLHNVLRPFILRRLKRDVEKQLPMKQEHV 693
F S +F WF + G +K+ V+RLH VL+PF+LRR+K DVEK LP K+E
Sbjct: 365 FNSADDFDSWF--DTKNCL-GDQKL----VERLHAVLKPFLLRRIKTDVEKSLPPKKEIK 417
Query: 694 IYCRLSKRQRNLYEDFIASS-ETQATLASANFFGMISVIMQLRKVCNHPDLFEG 746
IY LSK QR Y + + + + +++++MQLRK CNHP LF+G
Sbjct: 418 IYLGLSKMQREWYTKILMKDIDVLNSAGKMDKMRLLNILMQLRKCCNHPYLFDG 471
Score = 405 (147.6 bits), Expect = 5.1e-103, Sum P(3) = 5.1e-103
Identities = 86/177 (48%), Positives = 114/177 (64%)
Query: 984 YFPDRRLIQFDCGKLQELAILLRKLKSDGHRALIFTQMTKMLDILEEFISLYGYTYMRLD 1043
Y D ++ + GK+ L LL KLK G R LIF+QMT++LDILE++ GY Y RLD
Sbjct: 478 YTTDEHIVS-NSGKMVVLDKLLAKLKEQGSRVLIFSQMTRLLDILEDYCMWRGYEYCRLD 536
Query: 1044 GSTQPEERQT------------LMQRFNT-NPKIFLFILSTRSGGVGINLVGADTVIFYD 1090
G T EER+ ++ FN N F+F+LSTR+GG+GINL AD VI YD
Sbjct: 537 GQTPHEERENGFLQIYFRRRREAIEAFNVPNSSRFIFMLSTRAGGLGINLASADVVILYD 596
Query: 1091 SDWNPAMDQQAQDRCHRIGQTREVHIYRLISESTIEENILKKANQKRALDDLVIQSG 1147
SDWNP +D QA DR HRIGQ + V ++RLI+++T+EE I+++A K LD +VIQ G
Sbjct: 597 SDWNPQVDLQAMDRAHRIGQKKPVRVFRLITDNTVEERIVERAEIKLRLDSIVIQQG 653
Score = 56 (24.8 bits), Expect = 5.1e-103, Sum P(3) = 5.1e-103
Identities = 24/102 (23%), Positives = 49/102 (48%)
Query: 28 KDVKKFWMKIE-KLVLYKHQMEVDVRKKKALD--KQLEFLLGQTERYSSMLAENLVDSHK 84
K+ F +K+ K + +M+ + +K D K+ EFLL QTE ++ + + S
Sbjct: 62 KNASPFQLKLAAKASKSEKEMDPEYEEKMKADRAKRFEFLLKQTELFAHFIQPSAQKS-- 119
Query: 85 PVQQSPMREQPGI-QYKEADENGAEEPG-VQSKEADEDDAEQ 124
P SP+ + G + K+ D+ G + + ++++ E+
Sbjct: 120 PT--SPLNIKLGRPRIKKDDKQSLISAGDYRHRRTEQEEDEE 159
>ZFIN|ZDB-GENE-021125-1 [details] [associations]
symbol:smarca5 "SWI/SNF related, matrix associated,
actin dependent regulator of chromatin, subfamily a, member 5"
species:7955 "Danio rerio" [GO:0043044 "ATP-dependent chromatin
remodeling" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0016818 "hydrolase activity, acting on
acid anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0031491 "nucleosome binding"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0006338 "chromatin remodeling" evidence=IEA] [GO:0060041
"retina development in camera-type eye" evidence=IMP]
InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR009057 InterPro:IPR015194 InterPro:IPR015195
Pfam:PF00176 Pfam:PF00271 Pfam:PF09110 Pfam:PF09111 PROSITE:PS51194
SMART:SM00490 SMART:SM00717 ZFIN:ZDB-GENE-021125-1 GO:GO:0005524
GO:GO:0003677 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0060041
InterPro:IPR017884 PROSITE:PS51293 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0016585 GO:GO:0031491
GO:GO:0043044 GeneTree:ENSGT00680000100002 HOGENOM:HOG000192862
SUPFAM:SSF101224 OMA:EDYCHWR HOVERGEN:HBG056329 EMBL:CU550733
IPI:IPI00619566 UniGene:Dr.76168 Ensembl:ENSDART00000123972
ArrayExpress:B8A552 Bgee:B8A552 Uniprot:B8A552
Length = 1035
Score = 679 (244.1 bits), Expect = 7.1e-103, Sum P(3) = 7.1e-103
Identities = 138/312 (44%), Positives = 200/312 (64%)
Query: 441 TQVRTKF---PFLLKF-PLREYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTIAMLAH 496
T V T+F P +K LR+YQ GL+WL+++YE +NGILADEMGLGKT+ TI++L +
Sbjct: 145 TSVCTRFDDSPSYVKTGKLRDYQVRGLNWLISLYENGINGILADEMGLGKTLQTISLLGY 204
Query: 497 LACEKGIWGPHLIVVPTSVMLNWETEFLKWCPAFKILTYFGSAKERKFKRQGWLKPNSFH 556
+ + I GPH+++VP S + NW EF +W P+ K + G +ER + L P +
Sbjct: 205 MKHYRNIPGPHMVLVPKSTLYNWMNEFKRWVPSLKAVCLIGDREERTAFIRDTLLPGEWD 264
Query: 557 VCITTYRLIIQDSKVFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPLQ 616
VC+T+Y ++I + VFK+ W+YL++DEAH IKN KS+ + + F + R+LLTGTPLQ
Sbjct: 265 VCVTSYEMLIIERAVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGTPLQ 324
Query: 617 NDLMELWSLMHFLMPHIFQSHQEFKDWF-CNPISGMVEGQEKVNKEVVDRLHNVLRPFIL 675
N+L ELW+L++FL+P +F S ++F WF N G + ++V+RLH VLRPF+L
Sbjct: 325 NNLHELWALLNFLLPDVFNSSEDFDAWFDTNNCLG--------DTKLVERLHTVLRPFLL 376
Query: 676 RRLKRDVEKQLPMKQEHVIYCRLSKRQRNLYEDFIASS-ETQATLASANFFGMISVIMQL 734
RR+K DVEK L K+E IY LSK QR Y + + + + +++V+MQL
Sbjct: 377 RRIKADVEKSLLPKKEIKIYVGLSKMQREWYTKILMKDIDILNSAGKMDKMRLLNVLMQL 436
Query: 735 RKVCNHPDLFEG 746
RK CNHP LF+G
Sbjct: 437 RKCCNHPYLFDG 448
Score = 431 (156.8 bits), Expect = 7.1e-103, Sum P(3) = 7.1e-103
Identities = 91/182 (50%), Positives = 117/182 (64%)
Query: 984 YFPDRRLIQFDCGKLQELAILLRKLKSDGHRALIFTQMTKMLDILEEFISLYGYTYMRLD 1043
Y D L+ + GK+ L LL KLK G R LIF+QMT++LDILE++ Y Y RLD
Sbjct: 455 YTTDLHLV-VNSGKMVVLDKLLPKLKEQGSRVLIFSQMTRVLDILEDYCMWRNYGYCRLD 513
Query: 1044 GSTQPEERQTLMQRFNT-NPKIFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQ 1102
G T EERQ + FN N FLF+LSTR+GG+GINL AD VI YDSDWNP +D QA
Sbjct: 514 GQTPHEERQISINAFNEPNSSKFLFMLSTRAGGLGINLATADVVIIYDSDWNPQVDLQAM 573
Query: 1103 DRCHRIGQTREVHIYRLISESTIEENILKKANQKRALDDLVIQSGGYNTEFFKKLDPMEL 1162
DR HRIGQ ++V ++R I+++T+EE I+++A K LD +VIQ G KL E+
Sbjct: 574 DRAHRIGQKKQVRVFRFITDNTVEERIVERAEMKLRLDSIVIQQGRLVDPSMNKLGKDEM 633
Query: 1163 FS 1164
S
Sbjct: 634 LS 635
Score = 41 (19.5 bits), Expect = 7.1e-103, Sum P(3) = 7.1e-103
Identities = 13/44 (29%), Positives = 19/44 (43%)
Query: 192 VDKVG--RESSAEMGEDEAEPTVVEE-----GHVQGNGNDLLAG 228
+D G + ++E G DEA T ++ G DLL G
Sbjct: 19 LDPAGPAEDDTSENGHDEASDTAMDSEAQSSSPPSAKGKDLLGG 62
>ZFIN|ZDB-GENE-070705-296 [details] [associations]
symbol:si:dkey-148b12.1 "si:dkey-148b12.1"
species:7955 "Danio rerio" [GO:0016817 "hydrolase activity, acting
on acid anhydrides" evidence=IEA] [GO:0043044 "ATP-dependent
chromatin remodeling" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0016818 "hydrolase
activity, acting on acid anhydrides, in phosphorus-containing
anhydrides" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0031491
"nucleosome binding" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR009057 InterPro:IPR015194 InterPro:IPR015195
InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271 Pfam:PF09110
Pfam:PF09111 Pfam:PF13892 PROSITE:PS51194 SMART:SM00490
SMART:SM00717 ZFIN:ZDB-GENE-070705-296 GO:GO:0005524 GO:GO:0003677
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 GO:GO:0004386 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0016585 GO:GO:0031491
GO:GO:0043044 GeneTree:ENSGT00680000100002 HOGENOM:HOG000192862
SUPFAM:SSF101224 HOVERGEN:HBG056329 KO:K11727 OrthoDB:EOG44J2H9
EMBL:CR848717 EMBL:CU104724 IPI:IPI00488326 RefSeq:NP_001093467.1
UniGene:Dr.81160 SMR:A5WUY4 Ensembl:ENSDART00000020725
GeneID:559803 KEGG:dre:559803 OMA:IGHAWIN NextBio:20883144
Uniprot:A5WUY4
Length = 1036
Score = 684 (245.8 bits), Expect = 1.1e-102, Sum P(5) = 1.1e-102
Identities = 131/293 (44%), Positives = 191/293 (65%)
Query: 455 LREYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTIAMLAHLACEKGIWGPHLIVVPTS 514
LR+YQ GL+W++++YE +NGILADEMGLGKT+ TIA+L +L + I GPH+++VP S
Sbjct: 143 LRDYQIRGLNWMISLYENGINGILADEMGLGKTLQTIALLGYLKHYRNIPGPHMVLVPKS 202
Query: 515 VMLNWETEFLKWCPAFKILTYFGSAKERKFKRQGWLKPNSFHVCITTYRLIIQDSKVFKR 574
+ NW EF +W P K + G+ ER + + P + VC+T+Y ++I++ VFK+
Sbjct: 203 TLHNWMNEFKRWVPTLKAVCLIGNKDERAAFIRDVMMPGEWDVCVTSYEMVIREKSVFKK 262
Query: 575 KKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPLQNDLMELWSLMHFLMPHIF 634
W+YL++DEAH IKN KS+ + F + R+LLTGTPLQN+L ELWSL++FL+P +F
Sbjct: 263 FNWRYLVIDEAHRIKNEKSKLSEIAREFKTTNRLLLTGTPLQNNLHELWSLLNFLLPDVF 322
Query: 635 QSHQEFKDWFCNPISGMVEGQEKVNKEVVDRLHNVLRPFILRRLKRDVEKQLPMKQEHVI 694
S +F WF G ++++V+RLH VLRPF+LRR+K +VEK LP K+E I
Sbjct: 323 NSASDFDSWFDTNCLG--------DQKLVERLHAVLRPFLLRRIKAEVEKSLPPKKEVKI 374
Query: 695 YCRLSKRQRNLYEDFIASS-ETQATLASANFFGMISVIMQLRKVCNHPDLFEG 746
Y LSK QR Y + + + + +++++MQLRK CNHP LF+G
Sbjct: 375 YLGLSKMQREWYTRILMKDIDILNSAGKMDKMRLLNILMQLRKCCNHPYLFDG 427
Score = 417 (151.9 bits), Expect = 1.1e-102, Sum P(5) = 1.1e-102
Identities = 83/165 (50%), Positives = 113/165 (68%)
Query: 984 YFPDRRLIQFDCGKLQELAILLRKLKSDGHRALIFTQMTKMLDILEEFISLYGYTYMRLD 1043
Y D L+ + GK+ L LL K++ G R LIF+QMT++LDILE++ G+ Y RLD
Sbjct: 434 YTTDTHLV-INSGKMVALDKLLPKVQEQGSRVLIFSQMTRVLDILEDYCMWRGFEYCRLD 492
Query: 1044 GSTQPEERQTLMQRFNT-NPKIFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQ 1102
G+T E R+ + FN N F+F+LSTR+GG+GINL AD VI YDSDWNP +D QA
Sbjct: 493 GNTPHEAREQAIDAFNAPNSSKFIFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAM 552
Query: 1103 DRCHRIGQTREVHIYRLISESTIEENILKKANQKRALDDLVIQSG 1147
DR HRIGQ + V ++RLI+++T+EE I+++A K LD +VIQ G
Sbjct: 553 DRAHRIGQRKPVKVFRLITDNTVEERIVERAEMKLRLDSIVIQQG 597
Score = 46 (21.3 bits), Expect = 1.1e-102, Sum P(5) = 1.1e-102
Identities = 17/68 (25%), Positives = 32/68 (47%)
Query: 39 KLVLYKHQMEVDVRKKKALDK--QLEFLLGQTERYSSMLAENLVDSHKPVQQSPMREQPG 96
K V+ + + + +K+ D+ + EFLL QTE ++ + P SP++ + G
Sbjct: 31 KAVVKESLADPEYEEKRKTDRANRFEFLLKQTELFAHFIQP--ASQKSPT--SPLKVKMG 86
Query: 97 IQYKEADE 104
+ DE
Sbjct: 87 RPRIKQDE 94
Score = 45 (20.9 bits), Expect = 1.1e-102, Sum P(5) = 1.1e-102
Identities = 11/28 (39%), Positives = 14/28 (50%)
Query: 1874 KLRSVPKSQSLGKHKLSLSDSVKCPKSK 1901
K R PK QS K K +S K K++
Sbjct: 1008 KKRRTPKGQSAQKRKAEVSSEKKEKKAR 1035
Score = 38 (18.4 bits), Expect = 1.1e-102, Sum P(5) = 1.1e-102
Identities = 8/23 (34%), Positives = 15/23 (65%)
Query: 1202 DEADYMALKRAEQEEAVDNQEFT 1224
DEA+ ++ + E++E + Q FT
Sbjct: 806 DEAEPLSPEETEEKEKLLTQGFT 828
Score = 37 (18.1 bits), Expect = 4.2e-63, Sum P(5) = 4.2e-63
Identities = 10/27 (37%), Positives = 12/27 (44%)
Query: 1162 LFSGHRTLPMKTMQKEKAINNGNEVSL 1188
LF G P T IN+G V+L
Sbjct: 424 LFDGAEPGPPYTTDTHLVINSGKMVAL 450
>UNIPROTKB|O60264 [details] [associations]
symbol:SMARCA5 "SWI/SNF-related matrix-associated
actin-dependent regulator of chromatin subfamily A member 5"
species:9606 "Homo sapiens" [GO:0031491 "nucleosome binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0000183 "chromatin silencing at rDNA" evidence=IEA] [GO:0005677
"chromatin silencing complex" evidence=IEA] [GO:0006302
"double-strand break repair" evidence=IEA] [GO:0009790 "embryo
development" evidence=IEA] [GO:0006334 "nucleosome assembly"
evidence=IDA;TAS] [GO:0016887 "ATPase activity" evidence=IDA]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0006338 "chromatin remodeling" evidence=IDA]
[GO:0006352 "DNA-dependent transcription, initiation" evidence=IDA]
[GO:0016584 "nucleosome positioning" evidence=IDA] [GO:0031213 "RSF
complex" evidence=IPI] [GO:0042393 "histone binding" evidence=IDA]
[GO:0005524 "ATP binding" evidence=IDA] [GO:0000793 "condensed
chromosome" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0016589 "NURF complex" evidence=IDA] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=TAS] [GO:0005654 "nucleoplasm" evidence=TAS] [GO:0034080
"CENP-A containing nucleosome assembly at centromere" evidence=TAS]
[GO:0043596 "nuclear replication fork" evidence=IDA] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=IMP] [GO:0006200 "ATP
catabolic process" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] InterPro:IPR000330 InterPro:IPR001005
InterPro:IPR001650 InterPro:IPR009057 InterPro:IPR015194
InterPro:IPR015195 InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271
Pfam:PF09110 Pfam:PF09111 Pfam:PF13892 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00717 GO:GO:0005524
Reactome:REACT_115566 GO:GO:0005654 GO:GO:0005730 GO:GO:0003677
GO:GO:0006352 GO:GO:0006357 GO:GO:0016887 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0009790 InterPro:IPR017884 PROSITE:PS51293
GO:GO:0000183 GO:GO:0006302 GO:GO:0004386 GO:GO:0000793
GO:GO:0034080 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0031491 GO:GO:0016584 GO:GO:0005677
GO:GO:0016589 HOGENOM:HOG000192862 KO:K11654 SUPFAM:SSF101224
OMA:EDYCHWR GO:GO:0031213 HOVERGEN:HBG056329 OrthoDB:EOG44J2H9
EMBL:AB010882 EMBL:BC023144 IPI:IPI00297211 RefSeq:NP_003592.3
UniGene:Hs.558422 ProteinModelPortal:O60264 SMR:O60264
IntAct:O60264 MINT:MINT-2981772 STRING:O60264 PhosphoSite:O60264
PaxDb:O60264 PeptideAtlas:O60264 PRIDE:O60264 DNASU:8467
Ensembl:ENST00000283131 GeneID:8467 KEGG:hsa:8467 UCSC:uc003ijg.3
CTD:8467 GeneCards:GC04P144434 HGNC:HGNC:11101 HPA:CAB005227
HPA:HPA008751 MIM:603375 neXtProt:NX_O60264 PharmGKB:PA35951
InParanoid:O60264 PhylomeDB:O60264 GenomeRNAi:8467 NextBio:31688
ArrayExpress:O60264 Bgee:O60264 CleanEx:HS_SMARCA5
Genevestigator:O60264 GermOnline:ENSG00000153147 Uniprot:O60264
Length = 1052
Score = 688 (247.2 bits), Expect = 1.3e-102, Sum P(3) = 1.3e-102
Identities = 137/311 (44%), Positives = 202/311 (64%)
Query: 441 TQVRTKF---PFLLKF-PLREYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTIAMLAH 496
T V T+F P +K+ LR+YQ GL+WL+++YE +NGILADEMGLGKT+ TI++L +
Sbjct: 162 TNVCTRFEDSPSYVKWGKLRDYQVRGLNWLISLYENGINGILADEMGLGKTLQTISLLGY 221
Query: 497 LACEKGIWGPHLIVVPTSVMLNWETEFLKWCPAFKILTYFGSAKERKFKRQGWLKPNSFH 556
+ + I GPH+++VP S + NW +EF +W P + + G ++R + L P +
Sbjct: 222 MKHYRNIPGPHMVLVPKSTLHNWMSEFKRWVPTLRSVCLIGDKEQRAAFVRDVLLPGEWD 281
Query: 557 VCITTYRLIIQDSKVFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPLQ 616
VC+T+Y ++I++ VFK+ W+YL++DEAH IKN KS+ + + F + R+LLTGTPLQ
Sbjct: 282 VCVTSYEMLIKEKSVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGTPLQ 341
Query: 617 NDLMELWSLMHFLMPHIFQSHQEFKDWFCNPISGMVEGQEKVNKEVVDRLHNVLRPFILR 676
N+L ELWSL++FL+P +F S +F WF + G +K+ V+RLH VLRPF+LR
Sbjct: 342 NNLHELWSLLNFLLPDVFNSADDFDSWFD---TNNCLGDQKL----VERLHMVLRPFLLR 394
Query: 677 RLKRDVEKQLPMKQEHVIYCRLSKRQRNLYEDFIASS-ETQATLASANFFGMISVIMQLR 735
R+K DVEK LP K+E IY LSK QR Y + + + + +++++MQLR
Sbjct: 395 RIKADVEKSLPPKKEVKIYVGLSKMQREWYTRILMKDIDILNSAGKMDKMRLLNILMQLR 454
Query: 736 KVCNHPDLFEG 746
K CNHP LF+G
Sbjct: 455 KCCNHPYLFDG 465
Score = 422 (153.6 bits), Expect = 1.3e-102, Sum P(3) = 1.3e-102
Identities = 87/180 (48%), Positives = 117/180 (65%)
Query: 984 YFPDRRLIQFDCGKLQELAILLRKLKSDGHRALIFTQMTKMLDILEEFISLYGYTYMRLD 1043
Y D L+ + GK+ L LL KLK G R LIF+QMT++LDILE++ Y Y RLD
Sbjct: 472 YTTDMHLVT-NSGKMVVLDKLLPKLKEQGSRVLIFSQMTRVLDILEDYCMWRNYEYCRLD 530
Query: 1044 GSTQPEERQTLMQRFNT-NPKIFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQ 1102
G T +ERQ + +N N F+F+LSTR+GG+GINL AD VI YDSDWNP +D QA
Sbjct: 531 GQTPHDERQDSINAYNEPNSTKFVFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAM 590
Query: 1103 DRCHRIGQTREVHIYRLISESTIEENILKKANQKRALDDLVIQSGGYNTEFFKKLDPMEL 1162
DR HRIGQT+ V ++R I+++T+EE I+++A K LD +VIQ G + K+ E+
Sbjct: 591 DRAHRIGQTKTVRVFRFITDNTVEERIVERAEMKLRLDSIVIQQGRLVDQNLNKIGKDEM 650
Score = 39 (18.8 bits), Expect = 1.3e-102, Sum P(3) = 1.3e-102
Identities = 21/77 (27%), Positives = 32/77 (41%)
Query: 1150 NTEFFKKLDP--MELFSGHRTLPMKTMQKEKAINNGNEVSLSNADVEAALKCVEDEADYM 1207
N + F+ P EL KT+ K N + + A E LK DEA+ +
Sbjct: 770 NVQDFQFFPPRLFELLEKEILFYRKTIGY-KVPRNPELPNAAQAQKEEQLKI--DEAESL 826
Query: 1208 ALKRAEQEEAVDNQEFT 1224
+ E++E + Q FT
Sbjct: 827 NDEELEEKEKLLTQGFT 843
>RGD|1561046 [details] [associations]
symbol:Smarca1 "SWI/SNF related, matrix associated, actin
dependent regulator of chromatin, subfamily a, member 1"
species:10116 "Rattus norvegicus" [GO:0000733 "DNA strand
renaturation" evidence=ISO] [GO:0000790 "nuclear chromatin"
evidence=ISO] [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0006338
"chromatin remodeling" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=ISO] [GO:0007420 "brain development"
evidence=ISO] [GO:0016589 "NURF complex" evidence=ISO] [GO:0030182
"neuron differentiation" evidence=ISO] [GO:0031491 "nucleosome
binding" evidence=IEA] [GO:0036310 "annealing helicase activity"
evidence=ISO] [GO:0043044 "ATP-dependent chromatin remodeling"
evidence=IEA;ISO] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0090537 "CERF
complex" evidence=ISO] [GO:2000177 "regulation of neural precursor
cell proliferation" evidence=ISO] [GO:0008094 "DNA-dependent ATPase
activity" evidence=ISO] [GO:0070615 "nucleosome-dependent ATPase
activity" evidence=ISO] InterPro:IPR000330 InterPro:IPR001005
InterPro:IPR001650 InterPro:IPR009057 InterPro:IPR015194
InterPro:IPR015195 InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271
Pfam:PF09110 Pfam:PF09111 Pfam:PF13892 PROSITE:PS51194
SMART:SM00490 SMART:SM00717 RGD:1561046 GO:GO:0005524 GO:GO:0003677
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0016585 GO:GO:0031491 GO:GO:0043044
GeneTree:ENSGT00680000100002 SUPFAM:SSF101224 IPI:IPI00947680
PRIDE:D3ZIE5 Ensembl:ENSRNOT00000068478 UCSC:RGD:1561046
ArrayExpress:D3ZIE5 Uniprot:D3ZIE5
Length = 1034
Score = 687 (246.9 bits), Expect = 2.7e-102, Sum P(3) = 2.7e-102
Identities = 131/294 (44%), Positives = 193/294 (65%)
Query: 454 PLREYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTIAMLAHLACEKGIWGPHLIVVPT 513
PLR+YQ GL+WL+++YE +NGILADEMGLGKT+ TIA+L +L + GPH+++VP
Sbjct: 162 PLRDYQIRGLNWLISLYENGVNGILADEMGLGKTLQTIALLGYLKHYRNFPGPHMVLVPK 221
Query: 514 SVMLNWETEFLKWCPAFKILTYFGSAKERKFKRQGWLKPNSFHVCITTYRLIIQDSKVFK 573
S + NW EF +W P+ +++ + G R + + P + VC+T+Y ++I++ VFK
Sbjct: 222 STLHNWMNEFKRWVPSLRVICFVGDKDVRAAFIRDEMMPGEWDVCVTSYEMVIKEKSVFK 281
Query: 574 RKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPLQNDLMELWSLMHFLMPHI 633
+ W+YL++DEAH IKN KS+ + + F S R+LLTGTPLQN+L ELW+L++FL+P +
Sbjct: 282 KFHWRYLVIDEAHRIKNEKSKLSEIVREFKSTNRLLLTGTPLQNNLHELWALLNFLLPDV 341
Query: 634 FQSHQEFKDWFCNPISGMVEGQEKVNKEVVDRLHNVLRPFILRRLKRDVEKQLPMKQEHV 693
F S +F WF + G +K+ V+RLH VL+PF+LRR+K DVEK LP K+E
Sbjct: 342 FNSADDFDSWF--DTKNCL-GDQKL----VERLHAVLKPFLLRRIKTDVEKSLPPKKEIK 394
Query: 694 IYCRLSKRQRNLYEDFIASS-ETQATLASANFFGMISVIMQLRKVCNHPDLFEG 746
IY LSK QR Y + + + + +++++MQLRK CNHP LF+G
Sbjct: 395 IYLGLSKMQREWYTKILMKDIDVLNSSGKMDKMRLLNILMQLRKCCNHPYLFDG 448
Score = 407 (148.3 bits), Expect = 2.7e-102, Sum P(3) = 2.7e-102
Identities = 88/192 (45%), Positives = 120/192 (62%)
Query: 984 YFPDRRLIQFDCGKLQELAILLRKLKSDGHRALIFTQMTKMLDILEEFISLYGYTYMRLD 1043
Y D ++ + GK+ L LL ++K G R LIF+QMT++LDILE++ GY Y RLD
Sbjct: 455 YTTDEHIVS-NSGKMVALDKLLARIKEQGSRVLIFSQMTRLLDILEDYCMWRGYEYCRLD 513
Query: 1044 GSTQPEERQTL------------MQRFNT-NPKIFLFILSTRSGGVGINLVGADTVIFYD 1090
G T EER+ L ++ FN N F+F+LSTR+GG+GINL AD VI YD
Sbjct: 514 GQTPHEERENLFLHKHNLFSTEAIEAFNAPNSSKFIFMLSTRAGGLGINLASADVVILYD 573
Query: 1091 SDWNPAMDQQAQDRCHRIGQTREVHIYRLISESTIEENILKKANQKRALDDLVIQSGGYN 1150
SDWNP +D QA DR HRIGQ + V ++RLI+++T+EE I+++A K LD +VIQ G
Sbjct: 574 SDWNPQVDLQAMDRAHRIGQKKPVRVFRLITDNTVEERIVERAEIKLRLDSIVIQQGRLI 633
Query: 1151 TEFFKKLDPMEL 1162
+ KL E+
Sbjct: 634 DQQSNKLAKEEM 645
Score = 50 (22.7 bits), Expect = 2.7e-102, Sum P(3) = 2.7e-102
Identities = 23/102 (22%), Positives = 47/102 (46%)
Query: 28 KDVKKFWMKIE-KLVLYKHQMEVDVRKKKALD--KQLEFLLGQTERYSSMLAENLVDSHK 84
K F +K+ K + +M+ + +K D K+ EFLL QTE ++ + + S
Sbjct: 39 KITSPFQLKLAAKTSKSEKEMDPEYEEKMKADRAKRFEFLLKQTELFAHFIQPSAQKS-- 96
Query: 85 PVQQSPMR-EQPGIQYKEADENGAEEPG-VQSKEADEDDAEQ 124
P M+ +P + K+ D+ G + + ++++ E+
Sbjct: 97 PTSPLNMKLARPRV--KKDDKQSLISVGDYRHRRTEQEEDEE 136
>UNIPROTKB|F1P3Q4 [details] [associations]
symbol:SMARCA1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0043044 "ATP-dependent chromatin remodeling"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0031491 "nucleosome binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0007420 "brain development" evidence=IEA] [GO:0008094
"DNA-dependent ATPase activity" evidence=IEA] [GO:0016589 "NURF
complex" evidence=IEA] [GO:0030182 "neuron differentiation"
evidence=IEA] [GO:0036310 "annealing helicase activity"
evidence=IEA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IEA] InterPro:IPR000330 InterPro:IPR001005
InterPro:IPR001650 InterPro:IPR009057 InterPro:IPR015194
InterPro:IPR015195 InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271
Pfam:PF09110 Pfam:PF09111 Pfam:PF13892 PROSITE:PS51194
SMART:SM00490 SMART:SM00717 GO:GO:0005524 GO:GO:0045893
GO:GO:0003677 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
InterPro:IPR017884 PROSITE:PS51293 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0031491 GO:GO:0043044
GO:GO:0016589 GO:GO:0008094 GeneTree:ENSGT00680000100002
SUPFAM:SSF101224 OMA:PMSQKRK EMBL:AADN02013587 EMBL:AADN02013588
IPI:IPI00594974 Ensembl:ENSGALT00000013737 Uniprot:F1P3Q4
Length = 982
Score = 668 (240.2 bits), Expect = 4.1e-102, Sum P(3) = 4.1e-102
Identities = 128/293 (43%), Positives = 191/293 (65%)
Query: 455 LREYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTIAMLAHLACEKGIWGPHLIVVPTS 514
LR+YQ GL+W++++YE +NGILADEMGLGKT+ TIA+L +L + I GPH+++VP S
Sbjct: 107 LRDYQVRGLNWMISLYENGVNGILADEMGLGKTLQTIALLGYLKHYRNIPGPHMVLVPKS 166
Query: 515 VMLNWETEFLKWCPAFKILTYFGSAKERKFKRQGWLKPNSFHVCITTYRLIIQDSKVFKR 574
+ NW EF +W P+ + + G R + + P + VC+T+Y ++I++ VFK+
Sbjct: 167 TLHNWMNEFKRWVPSLRAVCLIGDKDARAAFIRDVMMPGEWDVCVTSYEMVIKEKSVFKK 226
Query: 575 KKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPLQNDLMELWSLMHFLMPHIF 634
W+YL++DEAH IKN KS+ + + F + R+LLTGTPLQN+L ELW+L++FL+P +F
Sbjct: 227 FNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGTPLQNNLHELWALLNFLLPDVF 286
Query: 635 QSHQEFKDWFCNPISGMVEGQEKVNKEVVDRLHNVLRPFILRRLKRDVEKQLPMKQEHVI 694
S +F WF + G +K+ V+RLH VL+PF+LRR+K +VEK LP K+E I
Sbjct: 287 NSADDFDSWF--DTKNCL-GDQKL----VERLHAVLKPFLLRRIKAEVEKSLPPKKEVKI 339
Query: 695 YCRLSKRQRNLYEDFIASS-ETQATLASANFFGMISVIMQLRKVCNHPDLFEG 746
Y LSK QR Y + + + + +++++MQLRK CNHP LF+G
Sbjct: 340 YLGLSKMQREWYTRILMKDIDILNSAGKMDKMRLLNILMQLRKCCNHPYLFDG 392
Score = 427 (155.4 bits), Expect = 4.1e-102, Sum P(3) = 4.1e-102
Identities = 86/165 (52%), Positives = 113/165 (68%)
Query: 984 YFPDRRLIQFDCGKLQELAILLRKLKSDGHRALIFTQMTKMLDILEEFISLYGYTYMRLD 1043
Y D LI + GK+ L LL KL+ G R L+F+QMT++LDILE++ GY Y RLD
Sbjct: 399 YTTDTHLIT-NSGKMLVLDKLLAKLREQGSRVLLFSQMTRLLDILEDYCMWRGYEYCRLD 457
Query: 1044 GSTQPEERQTLMQRFNT-NPKIFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQ 1102
G T EER+ + FN N F+F+LSTR+GG+GINL AD VI YDSDWNP +D QA
Sbjct: 458 GQTPHEEREEAIDTFNAPNSSKFIFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAM 517
Query: 1103 DRCHRIGQTREVHIYRLISESTIEENILKKANQKRALDDLVIQSG 1147
DR HRIGQ + V ++RLI+++T+EE I+++A K LD +VIQ G
Sbjct: 518 DRAHRIGQKKPVRVFRLITDNTVEERIVERAEIKLRLDSIVIQQG 562
Score = 44 (20.5 bits), Expect = 4.1e-102, Sum P(3) = 4.1e-102
Identities = 10/28 (35%), Positives = 16/28 (57%)
Query: 48 EVDVRKKKALDKQLEFLLGQTERYSSML 75
E + + K K+ EFLL QTE ++ +
Sbjct: 6 EYEEKMKADRAKRFEFLLKQTELFAHFI 33
>UNIPROTKB|F1S594 [details] [associations]
symbol:LOC100622433 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001487
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 Pfam:PF00439
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297
SMART:SM00490 GO:GO:0005524 GO:GO:0003677 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359
GeneTree:ENSGT00550000074659 EMBL:FP102365
Ensembl:ENSSSCT00000014884 OMA:KSSGHER Uniprot:F1S594
Length = 866
Score = 655 (235.6 bits), Expect = 5.2e-102, Sum P(3) = 5.2e-102
Identities = 142/303 (46%), Positives = 194/303 (64%)
Query: 455 LREYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTIAMLAHLACEKGIWGPHLIVVPTS 514
L++YQ GL+WLV++Y LNGILADEMGLGKTI TIA++ +L K I GP LI+VP S
Sbjct: 6 LKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRINGPFLIIVPLS 65
Query: 515 VMLNWETEFLKWCPAFKILTYFGS-AKERKFKRQGWLKPNSFHVCITTYRLIIQDSKVFK 573
+ NW EF KW P+ ++Y GS A R F Q L+ F+V +TTY II+D +
Sbjct: 66 TLSNWAYEFDKWAPSVVKVSYKGSPAARRAFVPQ--LRSGKFNVLLTTYEYIIKDKHILA 123
Query: 574 RKKWKYLILDEAHLIKNWKSQRWQTL-LNFNSKRRILLTGTPLQNDLMELWSLMHFLMPH 632
+ +WKY+I+DE H +KN + Q L ++ + RR+LLTGTPLQN L ELW+L++FL+P
Sbjct: 124 KIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRLLLTGTPLQNKLPELWALLNFLLPT 183
Query: 633 IFQSHQEFKDWFCNPISGMVEGQEKVNKE----VVDRLHNVLRPFILRRLKRDVEKQLPM 688
IF+S F+ WF P + M + +N+E ++ RLH VLRPF+LRRLK++VE QLP
Sbjct: 184 IFKSCSTFEQWFNAPFA-MTGEKVDLNEEETILIIRRLHKVLRPFLLRRLKKEVEAQLPE 242
Query: 689 KQEHVIYCRLSKRQRNLYEDFIASSE--TQATLASANFFG----MISVIMQLRKVCNHPD 742
K E+VI C +S QR LY A T + G +++ IMQLRK+CNHP
Sbjct: 243 KVEYVIKCDMSALQRVLYRHMQAKGVLLTDGSEKDKKGKGGTKTLMNTIMQLRKICNHPY 302
Query: 743 LFE 745
+F+
Sbjct: 303 MFQ 305
Score = 393 (143.4 bits), Expect = 5.2e-102, Sum P(3) = 5.2e-102
Identities = 94/258 (36%), Positives = 146/258 (56%)
Query: 996 GKLQELAILLRKLKSDGHRALIFTQMTKMLDILEEFISLYGYTYMRLDGSTQPEERQTLM 1055
GK + L +L KL++ H+ L+F QMT ++ I+E++ + G+ Y+RLDG+T+ E+R L+
Sbjct: 332 GKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLL 391
Query: 1056 QRFNT-NPKIFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQDRCHRIGQTREV 1114
+ FN + F+F+LSTR+GG+G+NL ADTVI +DSDWNP D QAQDR HRIGQ EV
Sbjct: 392 KTFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEV 451
Query: 1115 HIYRLISESTIEENILKKANQKRALDDLVIQSGGYNTEFFKKLDPMELFSGHRTLPMKTM 1174
+ RL + +++EE IL A K +D VIQ+G ++ +K E R +
Sbjct: 452 RVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFD----QKSSSHE----RRAFLQAIL 503
Query: 1175 QKEKAINNGNEVSLSNADVEAALKCVEDEAD-YMALKRAEQEEAVDNQEFTEEAVGRPED 1233
+ E+ +EV + V + E+E D +M + + E N + + E+
Sbjct: 504 EHEEQDEEEDEVP-DDETVNQMIARHEEEFDLFMRMDLDRRREEARNPKRKPRLM---EE 559
Query: 1234 DEL---VIEDTVRTDEPT 1248
DEL +I+D + T
Sbjct: 560 DELPSWIIKDDAEVERLT 577
Score = 41 (19.5 bits), Expect = 4.6e-65, Sum P(3) = 4.6e-65
Identities = 16/60 (26%), Positives = 27/60 (45%)
Query: 1190 NADVEAALKCVEDEADYMALKRAEQEEAVDNQEFTEEAVGRPEDDELVIEDTVRTDEPTD 1249
N D + + D+ +RA + ++++E EE P DDE V + R +E D
Sbjct: 475 NVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEQDEEEDEVP-DDETVNQMIARHEEEFD 533
Score = 39 (18.8 bits), Expect = 1.2e-63, Sum P(2) = 1.2e-63
Identities = 18/85 (21%), Positives = 36/85 (42%)
Query: 1154 FKKLDPMELFSGHRTLPMKTMQKEKAI--NNGNEVSLSNADV-EAALKCVEDEADYMALK 1210
FKK+ E H+ + ++K+ + N +L + + E ++ V +
Sbjct: 726 FKKIK--ERIRNHKYRSLNDLEKDVMLLCQNAQTFNLEGSLIYEDSI--VLQSVFTSVRQ 781
Query: 1211 RAEQEEAVDNQEFTEEAVGRPEDDE 1235
+ E+E+ + +E EE G E E
Sbjct: 782 KIEKEDDSEGEESEEEEEGEEEGSE 806
Score = 38 (18.4 bits), Expect = 1.5e-63, Sum P(2) = 1.5e-63
Identities = 26/131 (19%), Positives = 53/131 (40%)
Query: 1128 NILKKANQKRALDDLV----IQSGGYNTEFFKKLDPMELFSGHRTLPMKTMQKEKA---I 1180
N+ KK K+ +D ++ SG +E F +L + + L K + +K I
Sbjct: 676 NLTKK--MKKIVDAVIKYKDSSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERI 733
Query: 1181 NNGNEVSLSNADVEAALKCVEDEADYMALKRAEQEEAVDNQEFTEEAVGRPEDDELVIED 1240
N SL++ + + L C + + ++ V FT ++D+ E+
Sbjct: 734 RNHKYRSLNDLEKDVMLLCQNAQTFNLEGSLIYEDSIVLQSVFTSVRQKIEKEDDSEGEE 793
Query: 1241 TVRTDEPTDQG 1251
+ +E ++G
Sbjct: 794 SEEEEEGEEEG 804
Score = 37 (18.1 bits), Expect = 5.2e-102, Sum P(3) = 5.2e-102
Identities = 12/48 (25%), Positives = 24/48 (50%)
Query: 1515 RSPDSDSKLSRKRHDGSTELKTCES----IFIDLEQKSASRSKM-GGK 1557
+ DS+ + S + +G E ES + I L +K ++ ++ GG+
Sbjct: 785 KEDDSEGEESEEEEEGEEEGSESESRSVKVKIKLGRKEKAQDRLKGGR 832
>TAIR|locus:2150270 [details] [associations]
symbol:CHR23 "chromatin remodeling 23" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0004386 "helicase activity" evidence=IEA;ISS] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006259 "DNA metabolic process" evidence=RCA] [GO:0007062
"sister chromatid cohesion" evidence=RCA] [GO:0007126 "meiosis"
evidence=RCA] [GO:0009640 "photomorphogenesis" evidence=RCA]
[GO:0010388 "cullin deneddylation" evidence=RCA] [GO:0016567
"protein ubiquitination" evidence=RCA] [GO:0016571 "histone
methylation" evidence=RCA] [GO:0016579 "protein deubiquitination"
evidence=RCA] [GO:0031048 "chromatin silencing by small RNA"
evidence=RCA] [GO:0033044 "regulation of chromosome organization"
evidence=RCA] [GO:0045132 "meiotic chromosome segregation"
evidence=RCA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=RCA] InterPro:IPR000330 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 EMBL:CP002688 GO:GO:0003677 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 KO:K11647
OMA:WAPSISA IPI:IPI00536400 RefSeq:NP_197432.2 UniGene:At.43995
ProteinModelPortal:F4K128 SMR:F4K128 PRIDE:F4K128
EnsemblPlants:AT5G19310.1 GeneID:832051 KEGG:ath:AT5G19310
PhylomeDB:F4K128 Uniprot:F4K128
Length = 1064
Score = 650 (233.9 bits), Expect = 2.0e-101, Sum P(2) = 2.0e-101
Identities = 134/306 (43%), Positives = 188/306 (61%)
Query: 445 TKFPFLLKF-PLREYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTIAMLAHLACEKGI 503
TK P LL+ LR YQ GL W+V++Y NGILADEMGLGKTI TIA++A+L K +
Sbjct: 375 TKQPSLLQGGELRSYQLEGLQWMVSLYNNDYNGILADEMGLGKTIQTIALIAYLLESKDL 434
Query: 504 WGPHLIVVPTSVMLNWETEFLKWCPAFKILTYFGSAKERKFKRQGWLKPNSFHVCITTYR 563
GPHLI+ P +V+ NWE EF W P+ Y GS KE++ + + + F+V IT Y
Sbjct: 435 HGPHLILAPKAVLPNWENEFALWAPSISAFLYDGS-KEKRTEIRARIAGGKFNVLITHYD 493
Query: 564 LIIQDSKVFKRKKWKYLILDEAHLIKNWKSQRWQTL-LNFNSKRRILLTGTPLQNDLMEL 622
LI++D K+ W Y+I+DE H +KN + +TL + KRR+LLTGTP+QN L EL
Sbjct: 494 LIMRDKAFLKKIDWNYMIVDEGHRLKNHECALAKTLGTGYRIKRRLLLTGTPIQNSLQEL 553
Query: 623 WSLMHFLMPHIFQSHQEFKDWFCNPIS--GMVEGQEKVNKEVVDRLHNVLRPFILRRLKR 680
WSL++FL+PHIF S F++WF P + G ++ +++RLH+V+RPF+LRR K
Sbjct: 554 WSLLNFLLPHIFNSIHNFEEWFNTPFAECGSASLTDEEELLIINRLHHVIRPFLLRRKKS 613
Query: 681 DVEKQLPMKQEHVIYCRLSKRQRNLYEDFIASSETQATLASANFFGMISVIMQLRKVCNH 740
+VEK LP K + ++ C +S Q+ Y+ + + ++ MQLRK CNH
Sbjct: 614 EVEKFLPGKTQVILKCDMSAWQKLYYKQVTDVGRVGLHSGNGKSKSLQNLTMQLRKCCNH 673
Query: 741 PDLFEG 746
P LF G
Sbjct: 674 PYLFVG 679
Score = 445 (161.7 bits), Expect = 2.0e-101, Sum P(2) = 2.0e-101
Identities = 85/157 (54%), Positives = 120/157 (76%)
Query: 996 GKLQELAILLRKLKSDGHRALIFTQMTKMLDILEEFISLYGYTYMRLDGSTQPEERQTLM 1055
GK + L LL KLK GHR L+F+QMT+++D+LE ++SL Y Y+RLDGST+ ++R L+
Sbjct: 695 GKFELLDRLLPKLKKAGHRILLFSQMTRLIDLLEIYLSLNDYMYLRLDGSTKTDQRGILL 754
Query: 1056 QRFNT-NPKIFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQDRCHRIGQTREV 1114
++FN + F+F+LSTR+GG+G+NL ADT+I +DSDWNP MDQQA+DR HRIGQ +EV
Sbjct: 755 KQFNEPDSPYFMFLLSTRAGGLGLNLQTADTIIIFDSDWNPQMDQQAEDRAHRIGQKKEV 814
Query: 1115 HIYRLISESTIEENILKKANQKRALDDLVIQSGGYNT 1151
++ L+S +IEE IL++A QK +D VIQ+G +NT
Sbjct: 815 RVFVLVSIGSIEEVILERAKQKMGIDAKVIQAGLFNT 851
Score = 40 (19.1 bits), Expect = 6.2e-58, Sum P(3) = 6.2e-58
Identities = 10/49 (20%), Positives = 25/49 (51%)
Query: 1090 DSDWNPAMDQQAQDRCHRIGQTRE-VHIYRLISESTIEENILKKANQKR 1137
D W AM+ + +D ++ Q R+ +S + E +L ++++++
Sbjct: 960 DLQWMKAMESEDED-ASKVSQKRKRTDTKTRMSNGSKAEAVLSESDEEK 1007
Score = 39 (18.8 bits), Expect = 6.2e-58, Sum P(3) = 6.2e-58
Identities = 12/35 (34%), Positives = 21/35 (60%)
Query: 856 QDRASSVAWWNSL---RCQKKPVYSTSLRELLTVK 887
+D+ ++ + SL R +K+ VYS SL +L +K
Sbjct: 931 EDKTNAKNHFGSLTGKRKRKEAVYSDSLSDLQWMK 965
>FB|FBgn0011604 [details] [associations]
symbol:Iswi "Imitation SWI" species:7227 "Drosophila
melanogaster" [GO:0006338 "chromatin remodeling"
evidence=ISS;NAS;TAS] [GO:0016589 "NURF complex"
evidence=NAS;IDA;TAS] [GO:0005524 "ATP binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=IDA] [GO:0008094 "DNA-dependent
ATPase activity" evidence=IGI;IDA] [GO:0000166 "nucleotide binding"
evidence=TAS] [GO:0016584 "nucleosome positioning" evidence=IDA]
[GO:0006334 "nucleosome assembly" evidence=IDA] [GO:0016590 "ACF
complex" evidence=NAS;IDA;TAS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IMP;IDA] [GO:0008623 "CHRAC"
evidence=NAS;IDA;TAS] [GO:0006333 "chromatin assembly or
disassembly" evidence=IDA;TAS] [GO:0042766 "nucleosome
mobilization" evidence=IDA;TAS] [GO:0016887 "ATPase activity"
evidence=NAS] [GO:0035060 "brahma complex" evidence=IDA]
[GO:0003678 "DNA helicase activity" evidence=TAS] [GO:0005515
"protein binding" evidence=IPI] [GO:0006351 "transcription,
DNA-dependent" evidence=IDA] [GO:0005667 "transcription factor
complex" evidence=IPI] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=TAS] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0031491 "nucleosome binding" evidence=IEA]
[GO:0008134 "transcription factor binding" evidence=IPI]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IMP] [GO:0035076 "ecdysone
receptor-mediated signaling pathway" evidence=IGI] [GO:0007517
"muscle organ development" evidence=IMP] [GO:0048813 "dendrite
morphogenesis" evidence=IMP] [GO:0042752 "regulation of circadian
rhythm" evidence=IMP] [GO:0006325 "chromatin organization"
evidence=IMP] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IMP] [GO:0031213 "RSF complex"
evidence=IPI] [GO:0005700 "polytene chromosome" evidence=IDA]
[GO:0070615 "nucleosome-dependent ATPase activity" evidence=IDA]
[GO:0035063 "nuclear speck organization" evidence=IMP]
InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR009057 InterPro:IPR015194 InterPro:IPR015195
InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271 Pfam:PF09110
Pfam:PF09111 Pfam:PF13892 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 SMART:SM00717 EMBL:AE013599 GO:GO:0005524
GO:GO:0045892 GO:GO:0003677 GO:GO:0045944 GO:GO:0006351
GO:GO:0042752 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0005667
GO:GO:0048813 GO:GO:0007517 InterPro:IPR017884 PROSITE:PS51293
GO:GO:0005700 GO:GO:0035076 GO:GO:0042766 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0003678
GO:GO:0031491 GO:GO:0043044 GO:GO:0016584 GO:GO:0006334
GO:GO:0016589 GO:GO:0016590 GO:GO:0008623 GO:GO:0008094
ChiTaRS:SMARCA1 GeneTree:ENSGT00680000100002 KO:K11654
SUPFAM:SSF101224 EMBL:L27127 EMBL:AY094908 EMBL:BT044562 PIR:A56533
RefSeq:NP_523719.1 RefSeq:NP_725203.1 RefSeq:NP_725204.1
UniGene:Dm.2581 PDB:1OFC PDBsum:1OFC ProteinModelPortal:Q24368
SMR:Q24368 DIP:DIP-24067N IntAct:Q24368 MINT:MINT-252539
STRING:Q24368 PaxDb:Q24368 PRIDE:Q24368 EnsemblMetazoa:FBtr0087841
EnsemblMetazoa:FBtr0087842 EnsemblMetazoa:FBtr0087843 GeneID:36390
KEGG:dme:Dmel_CG8625 CTD:36390 FlyBase:FBgn0011604
InParanoid:Q24368 OMA:EDYCHWR OrthoDB:EOG4M0CGK PhylomeDB:Q24368
EvolutionaryTrace:Q24368 GenomeRNAi:36390 NextBio:798287
Bgee:Q24368 GermOnline:CG8625 GO:GO:0031213 GO:GO:0070615
GO:GO:0035063 Uniprot:Q24368
Length = 1027
Score = 651 (234.2 bits), Expect = 4.5e-101, Sum P(4) = 4.5e-101
Identities = 126/293 (43%), Positives = 189/293 (64%)
Query: 455 LREYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTIAMLAHLACEKGIWGPHLIVVPTS 514
+R+YQ GL+W++++YE +NGILADEMGLGKT+ TI++L +L K GPH+++VP S
Sbjct: 128 MRDYQIRGLNWMISLYENGINGILADEMGLGKTLQTISLLGYLKHFKNQAGPHIVIVPKS 187
Query: 515 VMLNWETEFLKWCPAFKILTYFGSAKERKFKRQGWLKPNSFHVCITTYRLIIQDSKVFKR 574
+ NW EF KWCP+ + + G R + L P + VC+T+Y + I++ VFK+
Sbjct: 188 TLQNWVNEFKKWCPSLRAVCLIGDQDTRNTFIRDVLMPGEWDVCVTSYEMCIREKSVFKK 247
Query: 575 KKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPLQNDLMELWSLMHFLMPHIF 634
W+YL++DEAH IKN KS+ + L F + R+L+TGTPLQN+L ELW+L++FL+P +F
Sbjct: 248 FNWRYLVIDEAHRIKNEKSKLSEILREFKTANRLLITGTPLQNNLHELWALLNFLLPDVF 307
Query: 635 QSHQEFKDWFCNPISGMVEGQEKVNKEVVDRLHNVLRPFILRRLKRDVEKQLPMKQEHVI 694
S ++F +WF N + + G + + + RLH VL+PF+LRRLK +VEK+L K+E I
Sbjct: 308 NSSEDFDEWF-NTNTCL--GDDAL----ITRLHAVLKPFLLRRLKAEVEKRLKPKKEMKI 360
Query: 695 YCRLSKRQRNLYEDFIASS-ETQATLASANFFGMISVIMQLRKVCNHPDLFEG 746
+ LSK QR+ Y + + + +++MQLRK NHP LF+G
Sbjct: 361 FVGLSKMQRDWYTKVLLKDIDVVNGAGKVEKMRLQNILMQLRKCTNHPYLFDG 413
Score = 445 (161.7 bits), Expect = 4.5e-101, Sum P(4) = 4.5e-101
Identities = 104/238 (43%), Positives = 144/238 (60%)
Query: 984 YFPDRRLIQFDCGKLQELAILLRKLKSDGHRALIFTQMTKMLDILEEFISLYGYTYMRLD 1043
Y D L+ ++ GK+ L LL KL+ G R LIF+QMT+MLDILE++ Y Y RLD
Sbjct: 420 YTTDTHLV-YNSGKMAILDKLLPKLQEQGSRVLIFSQMTRMLDILEDYCHWRNYNYCRLD 478
Query: 1044 GSTQPEERQTLMQRFNT-NPKIFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQ 1102
G T E+R +Q FN N FLF+LSTR+GG+GINL AD VI YDSDWNP MD QA
Sbjct: 479 GQTPHEDRNRQIQEFNMDNSAKFLFMLSTRAGGLGINLATADVVIIYDSDWNPQMDLQAM 538
Query: 1103 DRCHRIGQTREVHIYRLISESTIEENILKKANQKRALDDLVIQSGGYNTEFFKKLDPMEL 1162
DR HRIGQ ++V ++RLI+EST+EE I+++A K LD +VIQ G +L+ E+
Sbjct: 539 DRAHRIGQKKQVRVFRLITESTVEEKIVERAEVKLRLDKMVIQGGRLVDNRSNQLNKDEM 598
Query: 1163 FSGHRTLPMKTMQKEKAINNGNEVSLSNADVEAALKCVEDEADYMALKRAEQEEAVDN 1220
+ + Q + + E +++ D++ L+ EA K AEQ+ A+D+
Sbjct: 599 LN---IIRFGANQ----VFSSKETDITDEDIDVILE--RGEA-----KTAEQKAALDS 642
Score = 47 (21.6 bits), Expect = 4.5e-101, Sum P(4) = 4.5e-101
Identities = 17/76 (22%), Positives = 38/76 (50%)
Query: 46 QMEVDVRKKKALDKQLEFLLGQTERYSSMLAENLVDSHKPVQQSPMREQPGIQYKEADEN 105
+ E D + + ++ +FLL QTE ++ + + KP + P + I+ K+ +++
Sbjct: 32 EAEFDNKIEADRSRRFDFLLKQTEIFTHFMTNSAKSPTKP-KGRPKK----IKDKDKEKD 86
Query: 106 GAEEPGVQSKEADEDD 121
A+ + E +ED+
Sbjct: 87 VADHRH-RKTEQEEDE 101
Score = 39 (18.8 bits), Expect = 4.5e-59, Sum P(3) = 4.5e-59
Identities = 56/222 (25%), Positives = 91/222 (40%)
Query: 1183 GNEVSLSNADVEAALKCV-EDEADYMALKRAE---QEEAVDN-QEFTEEAVGRPEDDELV 1237
G ++L+ ADV + D A+ RA Q++ V + TE V ++++V
Sbjct: 511 GLGINLATADVVIIYDSDWNPQMDLQAMDRAHRIGQKKQVRVFRLITESTV----EEKIV 566
Query: 1238 --IEDTVRTDEPTDQGGCMTANNDNGM----MLTGNDPKEERALTFAAKEDDV-DMLADV 1290
E +R D+ QGG + N N + ML N + F++KE D+ D DV
Sbjct: 567 ERAEVKLRLDKMVIQGGRLVDNRSNQLNKDEML--NIIRFGANQVFSSKETDITDEDIDV 624
Query: 1291 KQMXXXXXXXGEAISSFENQLRPIDRYAIRFLELWDPIIDKTAVESEV-KFEEREWELDR 1349
GEA ++ Q +D L + + A S V +FE +W
Sbjct: 625 ------ILERGEAKTA--EQKAALDSLGESSLRTFTMDTNGEAGTSSVYQFEGEDWR--- 673
Query: 1350 IEKYKXXXXXXXXXXXXPLVYERWDADFATEAY-RQQVALAQ 1390
EK K P ER A++A +AY R+ + +++
Sbjct: 674 -EKQKLNALGNWIE---PPKRER-KANYAVDAYFREALRVSE 710
Score = 38 (18.4 bits), Expect = 4.5e-101, Sum P(4) = 4.5e-101
Identities = 10/36 (27%), Positives = 18/36 (50%)
Query: 1198 KCVEDEADYMALKRAEQEEAVDNQEFTEEAVGRPED 1233
K E +D ++R EQ + + + TEE + E+
Sbjct: 756 KNTELGSDATKVQREEQRKIDEAEPLTEEEIQEKEN 791
Score = 38 (18.4 bits), Expect = 1.4e-58, Sum P(4) = 1.4e-58
Identities = 9/18 (50%), Positives = 10/18 (55%)
Query: 1125 IEENILKKANQKRALDDL 1142
+E K A QK ALD L
Sbjct: 626 LERGEAKTAEQKAALDSL 643
>WB|WBGene00004204 [details] [associations]
symbol:swsn-4 species:6239 "Caenorhabditis elegans"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0016817
"hydrolase activity, acting on acid anhydrides" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0016818 "hydrolase
activity, acting on acid anhydrides, in phosphorus-containing
anhydrides" evidence=IEA] [GO:0009792 "embryo development ending in
birth or egg hatching" evidence=IMP] [GO:0040010 "positive
regulation of growth rate" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0040035 "hermaphrodite genitalia development"
evidence=IMP] InterPro:IPR000330 InterPro:IPR001487
InterPro:IPR001650 InterPro:IPR006576 InterPro:IPR014978
Pfam:PF00176 Pfam:PF00271 Pfam:PF00439 Pfam:PF07533 Pfam:PF08880
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297
SMART:SM00490 SMART:SM00592 SMART:SM00951 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0040010 GO:GO:0006355
GO:GO:0003677 GO:GO:0040035 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 KO:K11647
GeneTree:ENSGT00550000074659 OMA:QKKYTIS InterPro:IPR013999
InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529 SMART:SM00573
PROSITE:PS51204 EMBL:Z68751 EMBL:Z68341 EMBL:AF230280 PIR:T20488
RefSeq:NP_502082.1 UniGene:Cel.23435 ProteinModelPortal:G5EF53
SMR:G5EF53 EnsemblMetazoa:F01G4.1 GeneID:178015
KEGG:cel:CELE_F01G4.1 CTD:178015 WormBase:F01G4.1 NextBio:899366
Uniprot:G5EF53
Length = 1474
Score = 634 (228.2 bits), Expect = 7.1e-101, Sum P(5) = 7.1e-101
Identities = 128/296 (43%), Positives = 193/296 (65%)
Query: 455 LREYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTIAMLAHLACEKGIWGPHLIVVPTS 514
L+ YQ GL+W+V++Y LNGILADEMGLGKTI TI+++ +L K GP+L++VP S
Sbjct: 533 LKPYQIKGLEWMVSLYNNNLNGILADEMGLGKTIQTISLVTYLMEVKQNNGPYLVIVPLS 592
Query: 515 VMLNWETEFLKWCPAFKILTYFGSAKERKFKRQGWLKPNSFHVCITTYRLIIQDSKVFKR 574
+ NW+ EF KW P+ + Y G+ K+ + + +G ++ +F+V +TTY +I++ + +
Sbjct: 593 TLSNWQNEFAKWAPSVTTIIYKGT-KDARRRVEGQIRKGAFNVLMTTYEYVIKEKALLGK 651
Query: 575 KKWKYLILDEAHLIKNWKSQRWQTLLN--FNSKRRILLTGTPLQNDLMELWSLMHFLMPH 632
+WKY+I+DE H +KN + +LN F+++ R+LLTGTPLQN L ELW+L++FL+P
Sbjct: 652 IRWKYMIIDEGHRLKNHNC-KLTLMLNGFFHAQHRLLLTGTPLQNKLPELWALLNFLLPS 710
Query: 633 IFQSHQEFKDWFCNPISGMVEGQEKVNKE----VVDRLHNVLRPFILRRLKRDVEKQLPM 688
IF S F+ WF P + E E +N+E ++ RLH VLRPF+LRRLK++VE QLP
Sbjct: 711 IFSSCGTFEQWFNAPFATTGEKVE-LNQEETMLIIRRLHKVLRPFLLRRLKKEVESQLPD 769
Query: 689 KQEHVIYCRLSKRQRNLYEDFIASSETQATLASANFFGMISVIMQLRKVCNHPDLF 744
K E+VI C S Q+ +Y A ++S +++ ++ LRK+CNHP LF
Sbjct: 770 KTEYVIKCDQSALQKVIYRHMQKGLLLDAKMSSGAR-SLMNTVVHLRKLCNHPFLF 824
Score = 445 (161.7 bits), Expect = 7.1e-101, Sum P(5) = 7.1e-101
Identities = 86/156 (55%), Positives = 117/156 (75%)
Query: 996 GKLQELAILLRKLKSDGHRALIFTQMTKMLDILEEFISLYGYTYMRLDGSTQPEERQTLM 1055
GKL+ L +L KLK+ GHR L+F QMT M++I E+F++ YTY+RLDGST+P+ER L+
Sbjct: 850 GKLELLDRILPKLKATGHRILMFFQMTSMMNIFEDFLNFRRYTYLRLDGSTKPDERGDLL 909
Query: 1056 QRFNT-NPKIFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQDRCHRIGQTREV 1114
+FN N +FLF+LSTR+GG+G+NL ADTVI +DSDWNP D QAQDR HRIGQ +EV
Sbjct: 910 TQFNAPNSDLFLFMLSTRAGGLGLNLQTADTVIIFDSDWNPHQDMQAQDRAHRIGQKKEV 969
Query: 1115 HIYRLISESTIEENILKKANQKRALDDLVIQSGGYN 1150
+ RLI+ +++EE IL A K +D+ VIQ+G ++
Sbjct: 970 RVLRLITANSVEEKILAAARYKLNVDEKVIQAGKFD 1005
Score = 68 (29.0 bits), Expect = 7.1e-101, Sum P(5) = 7.1e-101
Identities = 26/86 (30%), Positives = 44/86 (51%)
Query: 25 NISKDVKKFWMKIEKLVLYKHQMEVDVRKKKAL-----DKQLEFLLGQTERYSSMLAENL 79
N ++ KK ++ EKL + K M+ D +AL D++L +LL QT+ Y L +L
Sbjct: 322 NNERERKKDEIRNEKLRMQK-LMQEDEEGYRALLDEKKDQRLVYLLQQTDEYVDSLC-SL 379
Query: 80 VDSHKPVQQSPMREQPGIQY-KEADE 104
V H+ ++ +E I+ + DE
Sbjct: 380 VRQHQNTEKKKKKEDKKIEKGNQMDE 405
Score = 60 (26.2 bits), Expect = 7.1e-101, Sum P(5) = 7.1e-101
Identities = 15/53 (28%), Positives = 29/53 (54%)
Query: 1446 KAVKEEPSVEPMSIDDDFYDEDATFSDAMSPPSTSQKKRKKAELALYDDEERE 1498
K K+E S + ++ D++ + S A +PP +K+ + +E + +DEE E
Sbjct: 1391 KDEKKETS-SSVKTEEAKKDDEPSTSSASAPPPKKKKESEDSEDPMEEDEEEE 1442
Score = 50 (22.7 bits), Expect = 7.9e-100, Sum P(5) = 7.9e-100
Identities = 14/53 (26%), Positives = 23/53 (43%)
Query: 1446 KAVKEEPSVEPMSIDDDFYDEDATFSDAMSPPSTSQKKRKKAELALYDDEERE 1498
K + E S +PM D+ E+ P S+ +K R + D+EE +
Sbjct: 1424 KKKESEDSEDPMEEDE----EEEIIGQKKEPASSRRKSRPTRRFSNEDEEEED 1472
Score = 45 (20.9 bits), Expect = 1.8e-98, Sum P(5) = 1.8e-98
Identities = 23/101 (22%), Positives = 41/101 (40%)
Query: 37 IEKLVLYKHQMEVDVRKKKALDKQLEFLLGQTERYSSMLAENLVDSHKPVQQSPMREQPG 96
++ L Q + +KKK DK++E E + E Q+P E+
Sbjct: 373 VDSLCSLVRQHQNTEKKKKKEDKKIEKGNQMDEEARVHVRERSTGKALTGDQAPKTEE-- 430
Query: 97 IQY-KEADENGAEEPGVQSKEADEDDAEQHSGFEPQLDAAD 136
I++ E P Q + DE++ E+ + EP+ + D
Sbjct: 431 IEFWLETHPEYEIVPRDQLSD-DEEEEEEEAPVEPEEEKDD 470
Score = 44 (20.5 bits), Expect = 3.3e-99, Sum P(5) = 3.3e-99
Identities = 17/58 (29%), Positives = 25/58 (43%)
Query: 1793 EQLDLTLEFQRELVDSTISFPPRVNLSVYGSDL--ETSVNKSTRENHHLKDSQVAENR 1848
E+++ E RE+VD T + R Y SDL + K E + VAE +
Sbjct: 1092 EEMERAREEGREVVDQTPNQRRRRREVDYSSDLLSDEQFMKQVEEVEDENNQAVAERK 1149
Score = 44 (20.5 bits), Expect = 4.1e-58, Sum P(3) = 4.1e-58
Identities = 18/73 (24%), Positives = 35/73 (47%)
Query: 1762 KLLSAALHDANSRQQDDKVSNFDRREDGPVIEQ-LDLTLEFQ-RELVDSTISFPPRVNLS 1819
K+L+AA + N ++ + FD+R G +Q L+ ++ E + + VN
Sbjct: 983 KILAAARYKLNVDEKVIQAGKFDQRSTGAERKQMLEQIIQADGEEEEEEEVPDDETVNQM 1042
Query: 1820 VYGSDLETSVNKS 1832
V S+ E ++ +S
Sbjct: 1043 VARSEEEFNIFQS 1055
Score = 43 (20.2 bits), Expect = 7.1e-101, Sum P(5) = 7.1e-101
Identities = 12/40 (30%), Positives = 20/40 (50%)
Query: 1213 EQEEAVDNQEFTEEAVGRPEDDELVIE--DTVRTDEPTDQ 1250
E+EE V + E + V R E++ + + D R E +Q
Sbjct: 1028 EEEEEVPDDETVNQMVARSEEEFNIFQSMDIDRRREEANQ 1067
Score = 42 (19.8 bits), Expect = 2.4e-98, Sum P(6) = 2.4e-98
Identities = 14/41 (34%), Positives = 21/41 (51%)
Query: 1785 RREDGPVIEQLDLTLEFQRELVD--STISFP---PRVNLSV 1820
+ EDG +I + TL ++EL D IS P R+N +
Sbjct: 1197 KNEDGELIADVFQTLPTRKELPDYYQVISKPMDFDRINKKI 1237
Score = 42 (19.8 bits), Expect = 5.2e-36, Sum P(4) = 5.2e-36
Identities = 10/30 (33%), Positives = 17/30 (56%)
Query: 629 LMPHIFQSHQEFKDWFCNPISGMVEGQEKV 658
LM I Q +EFK++ N + M + ++ V
Sbjct: 287 LMQAIIQHGKEFKEYHRNNLLKMAKSRKAV 316
Score = 38 (18.4 bits), Expect = 2.4e-98, Sum P(6) = 2.4e-98
Identities = 8/37 (21%), Positives = 18/37 (48%)
Query: 1460 DDDFYDEDATFSDAMSPPSTSQKKRKKAELALYDDEE 1496
D+ F + D + +KK++K ++A D+ +
Sbjct: 1127 DEQFMKQVEEVEDENNQAVAERKKQRKRKMAGLDEND 1163
Score = 38 (18.4 bits), Expect = 1.3e-35, Sum P(4) = 1.3e-35
Identities = 12/47 (25%), Positives = 20/47 (42%)
Query: 666 LHNVLRPFILRRLKRDV--EKQLPMKQEHVIYCRLSKRQRNLYEDFI 710
L L P+ RR KR E ++ K E +++R + D +
Sbjct: 242 LETALNPYAYRRTKRQSLREARVTEKLEKQQKMEQERKRRQKHTDLM 288
>TAIR|locus:2182978 [details] [associations]
symbol:CHR17 "chromatin remodeling factor17" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;IEA]
[GO:0008094 "DNA-dependent ATPase activity" evidence=ISS]
[GO:0005829 "cytosol" evidence=RCA] [GO:0000226 "microtubule
cytoskeleton organization" evidence=RCA] [GO:0000911 "cytokinesis
by cell plate formation" evidence=RCA] [GO:0006259 "DNA metabolic
process" evidence=RCA] [GO:0006261 "DNA-dependent DNA replication"
evidence=RCA] [GO:0006306 "DNA methylation" evidence=RCA]
[GO:0006342 "chromatin silencing" evidence=RCA] [GO:0006346
"methylation-dependent chromatin silencing" evidence=RCA]
[GO:0007126 "meiosis" evidence=RCA] [GO:0008283 "cell
proliferation" evidence=RCA] [GO:0010413 "glucuronoxylan metabolic
process" evidence=RCA] [GO:0016246 "RNA interference" evidence=RCA]
[GO:0016572 "histone phosphorylation" evidence=RCA] [GO:0031047
"gene silencing by RNA" evidence=RCA] [GO:0033044 "regulation of
chromosome organization" evidence=RCA] [GO:0045492 "xylan
biosynthetic process" evidence=RCA] [GO:0051567 "histone H3-K9
methylation" evidence=RCA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0010228 "vegetative to reproductive phase
transition of meristem" evidence=IGI] InterPro:IPR000330
InterPro:IPR001005 InterPro:IPR001650 InterPro:IPR009057
InterPro:IPR015194 InterPro:IPR015195 Pfam:PF00176 Pfam:PF00271
Pfam:PF09110 Pfam:PF09111 PROSITE:PS51194 SMART:SM00490
SMART:SM00717 GO:GO:0005524 EMBL:CP002688 GO:GO:0003677
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 GO:GO:0004386 GO:GO:0010228 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0016585 GO:GO:0031491
GO:GO:0043044 KO:K11654 OMA:MQRKWYK SUPFAM:SSF101224
IPI:IPI00547773 RefSeq:NP_850847.1 UniGene:At.19176
ProteinModelPortal:F4JY25 SMR:F4JY25 IntAct:F4JY25 PRIDE:F4JY25
EnsemblPlants:AT5G18620.2 GeneID:831980 KEGG:ath:AT5G18620
PhylomeDB:F4JY25 Uniprot:F4JY25
Length = 1072
Score = 680 (244.4 bits), Expect = 1.7e-100, Sum P(5) = 1.7e-100
Identities = 131/306 (42%), Positives = 201/306 (65%)
Query: 441 TQVRTKFPFLLKFPLREYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTIAMLAHLACE 500
T++ T+ P ++ LR+YQ GL+WL+ +YE +NGILADEMGLGKT+ TI++LA+L
Sbjct: 181 TRLLTQ-PACIQGKLRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLLAYLHEY 239
Query: 501 KGIWGPHLIVVPTSVMLNWETEFLKWCPAFKILTYFGSAKERKFKRQGWLKPNSFHVCIT 560
+GI GPH++V P S + NW E ++CP + + + G+ +ER+ R+ L F +C+T
Sbjct: 240 RGINGPHMVVAPKSTLGNWMNEIRRFCPVLRAVKFLGNPEERRHIREELLVAGKFDICVT 299
Query: 561 TYRLIIQDSKVFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPLQNDLM 620
++ + I++ +R W+Y+I+DEAH IKN S +T+ F++ R+L+TGTPLQN+L
Sbjct: 300 SFEMAIKEKTTLRRFSWRYIIIDEAHRIKNENSLLSKTMRLFSTNYRLLITGTPLQNNLH 359
Query: 621 ELWSLMHFLMPHIFQSHQEFKDWFCNPISGMVEGQEKVNKEVVDRLHNVLRPFILRRLKR 680
ELW+L++FL+P +F S + F +WF ISG E +EVV +LH VLRPF+LRRLK
Sbjct: 360 ELWALLNFLLPEVFSSAETFDEWF--QISG-----ENDQQEVVQQLHKVLRPFLLRRLKS 412
Query: 681 DVEKQLPMKQEHVIYCRLSKRQRNLYEDFIASSETQATLASANFFGMISVIMQLRKVCNH 740
DVEK LP K+E ++ +S+ Q+ Y+ + + + ++++ MQLRK CNH
Sbjct: 413 DVEKGLPPKKETILKVGMSQMQKQYYKALL-QKDLEVVNGGGERKRLLNIAMQLRKCCNH 471
Query: 741 PDLFEG 746
P LF+G
Sbjct: 472 PYLFQG 477
Score = 407 (148.3 bits), Expect = 1.7e-100, Sum P(5) = 1.7e-100
Identities = 80/155 (51%), Positives = 110/155 (70%)
Query: 994 DCGKLQELAILLRKLKSDGHRALIFTQMTKMLDILEEFISLYGYTYMRLDGSTQPEERQT 1053
+ GK+ L LL KLK R LIF+QMT++LDILE+++ GY Y R+DG+T +ER
Sbjct: 493 NAGKMVLLDKLLPKLKDRDSRVLIFSQMTRLLDILEDYLMYRGYQYCRIDGNTGGDERDA 552
Query: 1054 LMQRFNT-NPKIFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQDRCHRIGQTR 1112
++ +N + F+F+LSTR+GG+GINL AD VI YDSDWNP +D QAQDR HRIGQ +
Sbjct: 553 SIEAYNKPGSEKFVFLLSTRAGGLGINLATADVVILYDSDWNPQVDLQAQDRAHRIGQKK 612
Query: 1113 EVHIYRLISESTIEENILKKANQKRALDDLVIQSG 1147
EV ++R +E+ IE ++++A +K ALD LVIQ G
Sbjct: 613 EVQVFRFCTENAIEAKVIERAYKKLALDALVIQQG 647
Score = 46 (21.3 bits), Expect = 1.7e-100, Sum P(5) = 1.7e-100
Identities = 8/19 (42%), Positives = 13/19 (68%)
Query: 1238 IEDTVRTDEPTDQGGCMTA 1256
++DT+ DEP + G +TA
Sbjct: 815 MKDTIEVDEPEEVGDPLTA 833
Score = 45 (20.9 bits), Expect = 1.7e-100, Sum P(5) = 1.7e-100
Identities = 15/43 (34%), Positives = 19/43 (44%)
Query: 196 GRESSAEMGEDEAEPTVVEE-GHVQGNGNDLLAGSKLDTSGSL 237
GR SS E+E E + EE G + G+G L G L
Sbjct: 152 GRHSSKLTEEEEDEECLKEEEGGIVGSGGTRLLTQPACIQGKL 194
Score = 44 (20.5 bits), Expect = 2.2e-100, Sum P(5) = 2.2e-100
Identities = 21/89 (23%), Positives = 39/89 (43%)
Query: 28 KDVKKFWMKIEKL--VLYKHQMEVDVRKKKALDKQLEFLLGQTERYSSMLAENLVDSHKP 85
K+++K MK +K+ +L +D ++++LL QTE ++ + S K
Sbjct: 90 KEMQK--MKKQKIQQILDSQNASIDADMNNKGKGRIKYLLQQTELFAHFAKSDPSPSQKK 147
Query: 86 VQQSPMREQPGIQYKEADEN--GAEEPGV 112
+ R + +E DE EE G+
Sbjct: 148 -GKGRGRHSSKLTEEEEDEECLKEEEGGI 175
Score = 38 (18.4 bits), Expect = 1.7e-100, Sum P(5) = 1.7e-100
Identities = 8/16 (50%), Positives = 12/16 (75%)
Query: 1686 AAEQEDNELLLQKHFT 1701
A E E+ ELLL++ F+
Sbjct: 833 AEEVEEKELLLEEGFS 848
Score = 37 (18.1 bits), Expect = 1.3e-30, Sum P(5) = 1.3e-30
Identities = 10/29 (34%), Positives = 16/29 (55%)
Query: 857 DRASSVAWWNSLRCQKKPVYSTSLRELLT 885
D A + NSL + ++ST+ R L+T
Sbjct: 322 DEAHRIKNENSLLSKTMRLFSTNYRLLIT 350
>TAIR|locus:2173644 [details] [associations]
symbol:CHR1 "chromatin remodeling 1" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA;ISS] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0006349
"regulation of gene expression by genetic imprinting" evidence=IMP]
[GO:0044030 "regulation of DNA methylation" evidence=IMP]
[GO:0051574 "positive regulation of histone H3-K9 methylation"
evidence=IMP] [GO:0000786 "nucleosome" evidence=IDA] [GO:0004003
"ATP-dependent DNA helicase activity" evidence=IMP] [GO:0016887
"ATPase activity" evidence=IDA] [GO:0090241 "negative regulation of
histone H4 acetylation" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0006344 "maintenance of chromatin silencing"
evidence=IMP] [GO:0009294 "DNA mediated transformation"
evidence=IMP] [GO:0032197 "transposition, RNA-mediated"
evidence=IMP] [GO:0006342 "chromatin silencing" evidence=RCA]
[GO:0006346 "methylation-dependent chromatin silencing"
evidence=IMP;RCA] [GO:0008283 "cell proliferation" evidence=RCA]
[GO:0016246 "RNA interference" evidence=RCA] [GO:0016572 "histone
phosphorylation" evidence=RCA] [GO:0031048 "chromatin silencing by
small RNA" evidence=RCA] [GO:0051567 "histone H3-K9 methylation"
evidence=RCA] InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0006351 GO:GO:0004003 GO:GO:0006349 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0009294
EMBL:AB018119 GO:GO:0000786 GO:GO:0051574 GO:GO:0044030
GO:GO:0090241 GO:GO:0032197 EMBL:AF143940 EMBL:AY099638
EMBL:BT002161 EMBL:AY699010 EMBL:AY699011 IPI:IPI00524705
RefSeq:NP_201476.1 UniGene:At.28851 ProteinModelPortal:Q9XFH4
SMR:Q9XFH4 STRING:Q9XFH4 PaxDb:Q9XFH4 PRIDE:Q9XFH4
EnsemblPlants:AT5G66750.1 GeneID:836808 KEGG:ath:AT5G66750
TAIR:At5g66750 HOGENOM:HOG000172362 InParanoid:Q9XFH4 OMA:ETFYTAI
PhylomeDB:Q9XFH4 ProtClustDB:CLSN2686877 Genevestigator:Q9XFH4
GO:GO:0006344 GO:GO:0006346 Uniprot:Q9XFH4
Length = 764
Score = 609 (219.4 bits), Expect = 8.1e-100, Sum P(3) = 8.1e-100
Identities = 123/314 (39%), Positives = 192/314 (61%)
Query: 448 PFLLKFPLREYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTIAMLAHLACEKGIWGPH 507
P L L+ YQ G+ WL+++++ LNGILAD+MGLGKTI TI L+HL G+ GP+
Sbjct: 195 PLLTGGQLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIGFLSHLK-GNGLDGPY 253
Query: 508 LIVVPTSVMLNWETEFLKWCPAFKILTYFGSAKER-KFKRQGWLKP--NSFHVCITTYRL 564
L++ P S + NW E ++ P+ + Y G +R + +R+ K F + IT+Y +
Sbjct: 254 LVIAPLSTLSNWFNEIARFTPSINAIIYHGDKNQRDELRRKHMPKTVGPKFPIVITSYEV 313
Query: 565 IIQDSK-VFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPLQNDLMELW 623
+ D+K + + WKY+++DE H +KN K + + L + ++LLTGTPLQN+L ELW
Sbjct: 314 AMNDAKRILRHYPWKYVVIDEGHRLKNHKCKLLRELKHLKMDNKLLLTGTPLQNNLSELW 373
Query: 624 SLMHFLMPHIFQSHQEFKDWFC----NPISGMVEGQEKVNKEVVDRLHNVLRPFILRRLK 679
SL++F++P IF SH EF+ WF N E +EK +VV +LH +LRPFILRR+K
Sbjct: 374 SLLNFILPDIFTSHDEFESWFDFSEKNKNEATKEEEEKRRAQVVSKLHGILRPFILRRMK 433
Query: 680 RDVEKQLPMKQEHVIYCRLSKRQRNLYEDFIASSETQATLASANFFG------MISVIMQ 733
DVE LP K+E ++Y ++ Q+ +++ + ++ +A L G + ++++Q
Sbjct: 434 CDVELSLPRKKEIIMYATMTDHQKK-FQEHLVNNTLEAHLGENAIRGQGWKGKLNNLVIQ 492
Query: 734 LRKVCNHPDLFEGR 747
LRK CNHPDL +G+
Sbjct: 493 LRKNCNHPDLLQGQ 506
Score = 410 (149.4 bits), Expect = 8.1e-100, Sum P(3) = 8.1e-100
Identities = 89/214 (41%), Positives = 130/214 (60%)
Query: 985 FPDRRLIQFDCGKLQELAILLRKLKSDGHRALIFTQMTKMLDILEEFISLYGYTYMRLDG 1044
+P I CGK + L LL +L ++ H+ LIF+Q TK+LDI++ + S G+ R+DG
Sbjct: 513 YPPVEEIVGQCGKFRLLERLLVRLFANNHKVLIFSQWTKLLDIMDYYFSEKGFEVCRIDG 572
Query: 1045 STQPEERQTLMQRFNTNPK-IFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQD 1103
S + +ER+ ++ F+ +F+LSTR+GG+GINL ADT I YDSDWNP MD QA D
Sbjct: 573 SVKLDERRRQIKDFSDEKSSCSIFLLSTRAGGLGINLTAADTCILYDSDWNPQMDLQAMD 632
Query: 1104 RCHRIGQTREVHIYRLISESTIEENILKKANQKRALDDLVIQSGGYNTEFFKKLDPMELF 1163
RCHRIGQT+ VH+YRL + +IE +LK+A K L+ +VI G ++ E K P+E
Sbjct: 633 RCHRIGQTKPVHVYRLSTAQSIETRVLKRAYSKLKLEHVVIGQGQFHQERAKSSTPLEEE 692
Query: 1164 SGHRTLPMKTMQKEKAINNGNEVSLSNADVEAAL 1197
L ++K I + +S+AD++ L
Sbjct: 693 DILALLKEDETAEDKLI----QTDISDADLDRLL 722
Score = 46 (21.3 bits), Expect = 8.1e-100, Sum P(3) = 8.1e-100
Identities = 11/37 (29%), Positives = 20/37 (54%)
Query: 60 QLEFLLGQTERYSSMLAENLVD-SHKPVQQSPMREQP 95
+L+ LL QT+ YS L E + D + ++ + +P
Sbjct: 102 KLDELLTQTQLYSEFLLEKMEDITINGIESESQKAEP 138
Score = 44 (20.5 bits), Expect = 2.1e-61, Sum P(3) = 2.1e-61
Identities = 16/56 (28%), Positives = 28/56 (50%)
Query: 1108 IGQTREVHIYRLISESTIEE-NILKKANQKRALDDLVIQSGGYNTEFFKKLDPMEL 1162
IGQ + H R S + +EE +IL + +D +IQ+ + + + LD +L
Sbjct: 673 IGQG-QFHQERAKSSTPLEEEDILALLKEDETAEDKLIQTDISDADLDRLLDRSDL 727
>ASPGD|ASPL0000042729 [details] [associations]
symbol:AN2278 species:162425 "Emericella nidulans"
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0016586 "RSC complex" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001487 InterPro:IPR001650
InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271 Pfam:PF00439
Pfam:PF08880 PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194
SMART:SM00297 SMART:SM00490 SMART:SM00951 GO:GO:0005524
GO:GO:0005634 GO:GO:0006355 GO:GO:0003677 EMBL:BN001307
GO:GO:0004386 EMBL:AACD01000038 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10 SUPFAM:SSF47370
InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529 PROSITE:PS51204
HOGENOM:HOG000172362 KO:K11786 OrthoDB:EOG4D565R RefSeq:XP_659882.1
ProteinModelPortal:Q5BB02 STRING:Q5BB02
EnsemblFungi:CADANIAT00008970 GeneID:2875521 KEGG:ani:AN2278.2
OMA:GSDHSSP Uniprot:Q5BB02
Length = 1407
Score = 665 (239.2 bits), Expect = 1.4e-99, Sum P(4) = 1.4e-99
Identities = 135/301 (44%), Positives = 196/301 (65%)
Query: 455 LREYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTIAMLAHLACEKGIWGPHLIVVPTS 514
L+EYQ GL W++++Y LNGILADEMGLGKTI TI+++ H+ K GP L++VP S
Sbjct: 537 LKEYQMKGLQWMISLYNNNLNGILADEMGLGKTIQTISLITHIIERKRNNGPFLVIVPLS 596
Query: 515 VMLNWETEFLKWCPAFKILTYFGSAKERKFKRQGWLKPNSFHVCITTYRLIIQDSKVFKR 574
+ NW EF KW P+ + Y G RK ++Q ++ +F V +TTY II+D + +
Sbjct: 597 TLTNWNLEFEKWAPSVSRIVYKGPPNARKQQQQN-IRWGNFQVLLTTYEYIIKDRPILSK 655
Query: 575 KKWKYLILDEAHLIKNWKSQRWQTLLNFNSKR-RILLTGTPLQNDLMELWSLMHFLMPHI 633
KW ++I+DE H +KN +S+ TL + + R R++LTGTPLQN+L ELW+L++F++P+I
Sbjct: 656 IKWTHMIVDEGHRMKNTQSKLSSTLSQYYTSRYRLILTGTPLQNNLPELWALLNFVLPNI 715
Query: 634 FQSHQEFKDWFCNPISGMVEGQEKVN--KE----VVDRLHNVLRPFILRRLKRDVEKQLP 687
F+S + F +WF P + GQ++++ +E V+ RLH VLRPF+LRRLK+DVEK LP
Sbjct: 716 FKSVKSFDEWFNTPFAN-TGGQDRMDLTEEEQLLVIRRLHKVLRPFLLRRLKKDVEKDLP 774
Query: 688 MKQEHVIYCRLSKRQRNLYEDFIASSETQATLASANFFGM--IS-VIMQLRKVCNHPDLF 744
KQE VI CR S Q L + ++ + GM +S ++MQLRK+CNHP +F
Sbjct: 775 DKQERVIKCRFSALQAKLNKQLATHNKMVVSDGKGGKVGMRGLSNMLMQLRKLCNHPFVF 834
Query: 745 E 745
E
Sbjct: 835 E 835
Score = 415 (151.1 bits), Expect = 1.4e-99, Sum P(4) = 1.4e-99
Identities = 82/164 (50%), Positives = 117/164 (71%)
Query: 990 LIQFDCGKLQELAILLRKLKSDGHRALIFTQMTKMLDILEEFISLYGYTYMRLDGSTQPE 1049
LI GK + L +L K K+ GHR L+F QMT++++I+E+F+ L G Y+RLDGST+ +
Sbjct: 850 LIWRTAGKFELLDRILPKFKATGHRVLMFFQMTQIMNIMEDFLRLRGMKYLRLDGSTKSD 909
Query: 1050 ERQTLMQRFNT-NPKIFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQDRCHRI 1108
+R L++ FN + + F F+LSTR+GG+G+NL ADTVI +DSDWNP D QAQDR HRI
Sbjct: 910 DRSDLLKLFNAPDSEYFCFLLSTRAGGLGLNLQTADTVIIFDSDWNPHQDLQAQDRAHRI 969
Query: 1109 GQTREVHIYRLISESTIEENILKKANQKRALDDLVIQSGGYNTE 1152
GQ EV I RLI+ +++EE IL++A K +D VIQ+G ++ +
Sbjct: 970 GQKNEVRILRLITSNSVEEKILERAQFKLDMDGKVIQAGKFDNK 1013
Score = 62 (26.9 bits), Expect = 1.4e-99, Sum P(4) = 1.4e-99
Identities = 25/102 (24%), Positives = 48/102 (47%)
Query: 36 KIEKLVLYKHQ-MEVDVRKK--KALDKQLEFLLGQTER-YSSML--AENLVDSHKPVQQS 89
K+ +++L HQ ME + +++ + ++L+ L E Y +L A++ SH Q
Sbjct: 404 KLGRMMLQHHQHMEREEQRRVERTAKQRLQALKANDEETYLKLLGQAKDSRISHLLNQTD 463
Query: 90 PMREQPGIQYKEADENGAEEPGVQSKEADEDDAEQHSGFEPQ 131
+Q ++ N AE G + D+DD + SG + +
Sbjct: 464 GFLKQLAASVRQQQRNQAERYGEEHDFDDDDDEDIASGSDEE 505
Score = 51 (23.0 bits), Expect = 1.4e-61, Sum P(4) = 1.4e-61
Identities = 13/56 (23%), Positives = 27/56 (48%)
Query: 1114 VHIYRLISESTIEENILKKANQKRALDDLVIQSGGYNTEFFKKLDPMELFSGHRTL 1169
+ + +L + + E + + N R +DL+ ++ G E ++ P +GHR L
Sbjct: 822 MQLRKLCNHPFVFEQVEDQVNPGRGTNDLIWRTAG-KFELLDRILPKFKATGHRVL 876
Score = 45 (20.9 bits), Expect = 1.4e-99, Sum P(4) = 1.4e-99
Identities = 19/63 (30%), Positives = 27/63 (42%)
Query: 1169 LPMKTMQ-KEKAINNGNEVSLSNADVEAALKCVEDEADYMALKRAEQEEAVDNQEFTEEA 1227
L +T Q K K V + D AAL+ + + Y AL EQE D+ + +
Sbjct: 1203 LAEETPQPKRKRGRQAKPVETLSPDDRAALQQILNNV-YQALMDMEQELPADSSDSEDGP 1261
Query: 1228 VGR 1230
V R
Sbjct: 1262 VTR 1264
Score = 43 (20.2 bits), Expect = 2.2e-99, Sum P(4) = 2.2e-99
Identities = 29/126 (23%), Positives = 47/126 (37%)
Query: 1194 EAALKCVEDEADYMALKRAEQEEAVDNQEFTEEAVGRP-EDDELVIE---DTVRTDEPTD 1249
E L V+ + D + A +E V+ + +E GR + DE E +T T +P
Sbjct: 1129 EQWLMAVDADDDTIEDAIARKEARVEKRRSNKEKRGRKAQGDESSPEPSRETSETPQPKK 1188
Query: 1250 QGGCMTANNDNGMMLTGNDPKEERALTFAAKEDDVDMLADVKQMXXXXXXXGEAISSFEN 1309
+G A L P+ +R AK + D + +A+ E
Sbjct: 1189 RGRRGPAPKRKAEELAEETPQPKRKRGRQAKPVETLSPDDRAALQQILNNVYQALMDMEQ 1248
Query: 1310 QLRPID 1315
+L P D
Sbjct: 1249 EL-PAD 1253
Score = 38 (18.4 bits), Expect = 7.4e-99, Sum P(4) = 7.4e-99
Identities = 8/31 (25%), Positives = 16/31 (51%)
Query: 1232 EDDELVIEDTVRTDEPTDQGGCMTANNDNGM 1262
E+ + ++ + T E TDQ G +D+ +
Sbjct: 1017 EERDALLRTLLETAEGTDQAGDQDEMDDDDL 1047
>UNIPROTKB|E1C2F7 [details] [associations]
symbol:E1C2F7 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0000790 "nuclear
chromatin" evidence=IEA] [GO:0001105 "RNA polymerase II
transcription coactivator activity" evidence=IEA] [GO:0008285
"negative regulation of cell proliferation" evidence=IEA]
[GO:0016514 "SWI/SNF complex" evidence=IEA] [GO:0030308 "negative
regulation of cell growth" evidence=IEA] [GO:0035887 "aortic smooth
muscle cell differentiation" evidence=IEA] [GO:0044212
"transcription regulatory region DNA binding" evidence=IEA]
[GO:0045111 "intermediate filament cytoskeleton" evidence=IEA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0071564 "npBAF complex" evidence=IEA] [GO:0071565
"nBAF complex" evidence=IEA] [GO:0071778 "WINAC complex"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001487
InterPro:IPR001650 InterPro:IPR006576 InterPro:IPR014978
Pfam:PF00176 Pfam:PF00271 Pfam:PF00439 Pfam:PF07533 Pfam:PF08880
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297
SMART:SM00490 SMART:SM00592 SMART:SM00951 GO:GO:0005524
GO:GO:0045892 GO:GO:0008285 GO:GO:0030308 GO:GO:0045944
GO:GO:0044212 GO:GO:0045111 GO:GO:0000790 GO:GO:0071564
GO:GO:0016514 GO:GO:0071565 GO:GO:0004386 GO:GO:0001105
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359 GO:GO:0071778
GeneTree:ENSGT00550000074659 InterPro:IPR013999 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 SMART:SM00573 PROSITE:PS51204
OMA:PQEGMHQ EMBL:AADN02068434 EMBL:AADN02068435 EMBL:AADN02068436
EMBL:AADN02068437 EMBL:AADN02068438 EMBL:AADN02068439
EMBL:AADN02068440 EMBL:AADN02068441 IPI:IPI00583413
Ensembl:ENSGALT00000016528 Uniprot:E1C2F7
Length = 1546
Score = 652 (234.6 bits), Expect = 2.9e-99, Sum P(6) = 2.9e-99
Identities = 141/318 (44%), Positives = 199/318 (62%)
Query: 440 TTQVRTKFPFLLKFPLREYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTIAMLAHLAC 499
T +V + L+ L+ YQ GL+W+V++Y LNGILADEMGLGKTI TIA++ +L
Sbjct: 683 TERVEKQSSLLINGTLKHYQLQGLEWMVSLYNNNLNGILADEMGLGKTIQTIALITYLME 742
Query: 500 EKGIWGPHLIVVPTSVMLNWETEFLKWCPAFKILTYFGS-AKERKFKRQGWLKPNSFHVC 558
K + GP+LI+VP S + NW EF KW P+ ++Y G+ A R Q L+ F+V
Sbjct: 743 HKRLNGPYLIIVPLSTLSNWTYEFDKWAPSVVKISYKGTPAMRRSLVPQ--LRSGKFNVL 800
Query: 559 ITTYRLIIQDSKVFKRKKWKYLILDEAHLIKNWKSQRWQTL-LNFNSKRRILLTGTPLQN 617
+TTY II+D + + +WKY+I+DE H +KN + Q L ++ + RRILLTGTPLQN
Sbjct: 801 LTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRILLTGTPLQN 860
Query: 618 DLMELWSLMHFLMPHIFQSHQEFKDWFCNPISGMVEGQEKVNKE----VVDRLHNVLRPF 673
L ELW+L++FL+P IF+S F+ WF P + M + +N+E ++ RLH VLRPF
Sbjct: 861 KLPELWALLNFLLPTIFKSCSTFEQWFNAPFA-MTGERVDLNEEETILIIRRLHKVLRPF 919
Query: 674 ILRRLKRDVEKQLPMKQEHVIYCRLSKRQRNLYEDFIASSE--TQATLASANFFG----M 727
+LRRLK++VE QLP K E+VI C +S Q+ LY A T + G +
Sbjct: 920 LLRRLKKEVESQLPEKVEYVIKCDMSALQKILYRHMQAKGILLTDGSEKDKKGKGGAKTL 979
Query: 728 ISVIMQLRKVCNHPDLFE 745
++ IMQLRK+CNHP +F+
Sbjct: 980 MNTIMQLRKICNHPYMFQ 997
Score = 393 (143.4 bits), Expect = 2.9e-99, Sum P(6) = 2.9e-99
Identities = 74/156 (47%), Positives = 109/156 (69%)
Query: 996 GKLQELAILLRKLKSDGHRALIFTQMTKMLDILEEFISLYGYTYMRLDGSTQPEERQTLM 1055
GK + L +L KL++ HR L+F QMT ++ I+E++ + + Y+RLDG+T+ E+R L+
Sbjct: 1024 GKFELLDRILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRLDGTTKSEDRAALL 1083
Query: 1056 QRFNT-NPKIFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQDRCHRIGQTREV 1114
++FN + F+F+LSTR+GG+G+NL ADTVI +DSDWNP D QAQDR HRIGQ EV
Sbjct: 1084 KKFNEPGSQYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEV 1143
Query: 1115 HIYRLISESTIEENILKKANQKRALDDLVIQSGGYN 1150
+ RL + +++EE IL A K +D VIQ+G ++
Sbjct: 1144 RVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFD 1179
Score = 84 (34.6 bits), Expect = 2.9e-99, Sum P(6) = 2.9e-99
Identities = 26/85 (30%), Positives = 46/85 (54%)
Query: 25 NISKDVKKFWMKIEKLVLYKHQMEVDVRKKKALD----KQLEFLLGQTERYSSMLAENLV 80
N ++ KK +IEK + + E + +K +D ++L +LL QT+ Y + L NLV
Sbjct: 459 NTEREQKKETERIEKERMRRLMAEDEEGYRKLIDQKKDRRLAYLLQQTDEYVANLT-NLV 517
Query: 81 DSHKPVQQSPMREQPGIQYKEADEN 105
HK Q + +++ + K+A+EN
Sbjct: 518 WEHKQAQAAKEKKKRRRRKKKAEEN 542
Score = 65 (27.9 bits), Expect = 2.9e-99, Sum P(6) = 2.9e-99
Identities = 28/90 (31%), Positives = 38/90 (42%)
Query: 1442 TSESKAVKEEPSVEPMSIDDDFYDEDATFSDAMSPPSTSQKKRKKAELALYDDEEREXXX 1501
++ K KEE S E S DD+ DED D S S+ + K +L D++ RE
Sbjct: 1457 SARQKIAKEEES-EDESNDDE--DED----DEEESESESKSVKVKIKLNKKDEKSREKGK 1509
Query: 1502 XXXXXXXXXXXPVRSPDSDSKLSRKRHDGS 1531
PV S D DS + +D S
Sbjct: 1510 GKKRQSRAKAKPVVS-DDDSDEDQDENDQS 1538
Score = 46 (21.3 bits), Expect = 2.9e-99, Sum P(6) = 2.9e-99
Identities = 19/56 (33%), Positives = 23/56 (41%)
Query: 232 DTSGSLVRRCD--EINGGLSISENHLLDIETSQVRDTSKKSGASTQKQALYDFSDE 285
D SGS D E + L E LLD + +V + K T KQ D DE
Sbjct: 610 DESGSEYEEEDDEEESSRLEADEKILLDPNSEEVSEKDAKQIIETAKQ---DVDDE 662
Score = 44 (20.5 bits), Expect = 4.3e-97, Sum P(6) = 4.3e-97
Identities = 8/33 (24%), Positives = 19/33 (57%)
Query: 1928 KDANLRFDLIQEAWLEDMDGGRLSCMDQDLSLE 1960
+D + L ++ WL ++ G L M++++ L+
Sbjct: 1286 RDVDYSDALTEKQWLRAIEDGNLEEMEEEVRLK 1318
Score = 40 (19.1 bits), Expect = 2.9e-99, Sum P(6) = 2.9e-99
Identities = 15/60 (25%), Positives = 27/60 (45%)
Query: 1190 NADVEAALKCVEDEADYMALKRAEQEEAVDNQEFTEEAVGRPEDDELVIEDTVRTDEPTD 1249
N D + + D+ +RA + ++++E EE P DDE + + R +E D
Sbjct: 1167 NVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEENEEEDEVP-DDETLNQMIARREEEFD 1225
Score = 38 (18.4 bits), Expect = 1.8e-96, Sum P(6) = 1.8e-96
Identities = 9/31 (29%), Positives = 15/31 (48%)
Query: 1743 KSTREPARRVKFTNLGQSSKLLSAALHDANS 1773
K +E R K+ +LG K + H+A +
Sbjct: 1406 KKIKERIRNHKYRSLGDLEKDVMLLCHNAQT 1436
>UNIPROTKB|G4NCV5 [details] [associations]
symbol:MGG_01012 "ISWI chromatin-remodeling complex ATPase
ISW2" species:242507 "Magnaporthe oryzae 70-15" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000330
InterPro:IPR001005 InterPro:IPR001650 InterPro:IPR009057
InterPro:IPR015194 InterPro:IPR015195 Pfam:PF00176 Pfam:PF00271
Pfam:PF09110 Pfam:PF09111 PROSITE:PS51194 SMART:SM00490
SMART:SM00717 GO:GO:0005524 EMBL:CM001235 GO:GO:0003677
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0016585 GO:GO:0031491 GO:GO:0043044
SUPFAM:SSF101224 RefSeq:XP_003717932.1 EnsemblFungi:MGG_01012T0
GeneID:2674262 KEGG:mgr:MGG_01012 Uniprot:G4NCV5
Length = 1128
Score = 666 (239.5 bits), Expect = 3.1e-99, Sum P(3) = 3.1e-99
Identities = 135/311 (43%), Positives = 198/311 (63%)
Query: 439 STTQVRTKFPFLLKFPLREYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTIAMLAHLA 498
S V + P ++ +R+YQ GL+WL++++E ++GILADEMGLGKT+ TI+ L +L
Sbjct: 170 SAETVFRESPAFIQGTMRDYQIAGLNWLISLHENGISGILADEMGLGKTLQTISFLGYLR 229
Query: 499 CEKGIWGPHLIVVPTSVMLNWETEFLKWCPAFKILTYFGSAKERKFKRQGWLKPNSFHVC 558
GI GPHL++VP S + NW+ EF KW P +L G+ +ER L SF VC
Sbjct: 230 HIMGITGPHLVIVPKSTLDNWKREFGKWTPEVNVLVLQGAKEERAALIAERLVDESFDVC 289
Query: 559 ITTYRLIIQDSKVFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPLQND 618
IT+Y +I+++ K+ W+Y+I+DEAH IKN +S Q + FNS+ R+L+TGTPLQN+
Sbjct: 290 ITSYEMILREKSHLKKFAWEYIIIDEAHRIKNEESSLAQVIRLFNSRNRLLITGTPLQNN 349
Query: 619 LMELWSLMHFLMPHIFQSHQEFKDWFCNPISGMVEGQEKVNKEVVDRLHNVLRPFILRRL 678
+ ELW+L++FL+P +F + F WF SG EGQ+ + VV +LH VLRPF+LRR+
Sbjct: 350 IHELWALLNFLLPDVFGDSEAFDQWF----SG--EGQD--SDTVVQQLHRVLRPFLLRRV 401
Query: 679 KRDVEKQLPMKQEHVIYCRLSKRQRNLYEDFIASSETQATLASANFFG---MISVIMQLR 735
K DVEK L K+E +Y ++++ QR Y+ + A+ +++++MQLR
Sbjct: 402 KADVEKSLLPKKEVNLYLKMTEMQRTWYQKILEKDIDAVNGANGKRESKTRLLNIVMQLR 461
Query: 736 KVCNHPDLFEG 746
K CNHP LFEG
Sbjct: 462 KCCNHPYLFEG 472
Score = 422 (153.6 bits), Expect = 3.1e-99, Sum P(3) = 3.1e-99
Identities = 97/248 (39%), Positives = 146/248 (58%)
Query: 984 YFPDRRLIQFDCGKLQELAILLRKLKSDGHRALIFTQMTKMLDILEEFISLYGYTYMRLD 1043
Y D L+ ++ GK+ L LL++LK+ G R LIF+QM+++LDILE++ Y Y R+D
Sbjct: 479 YTTDEHLV-YNSGKMVVLDKLLKRLKAQGSRVLIFSQMSRVLDILEDYCVFREYKYSRID 537
Query: 1044 GSTQPEERQTLMQRFNT-NPKIFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQ 1102
G T E+R + +N + F+F+L+TR+GG+GINL AD VI +DSDWNP D QA
Sbjct: 538 GGTAHEDRIAAIDEYNKPGSEKFVFLLTTRAGGLGINLTTADIVILFDSDWNPQADLQAM 597
Query: 1103 DRCHRIGQTREVHIYRLISESTIEENILKKANQKRALDDLVIQSGGYNTEFFKKLDPMEL 1162
DR HRIGQT++V++YR + ++TIEE +L++A QK LD LVIQ G + EL
Sbjct: 598 DRAHRIGQTKQVYVYRFLVDNTIEEKVLERAAQKLHLDRLVIQQGRAQVAAKAAANKDEL 657
Query: 1163 FSGHRTLPMKTMQKEK---AINNGNEVSLSNADVEAALKCVEDEADYMALKRAEQEEAVD 1219
S + K K+ + + +++ + D+EA L E + R E+ D
Sbjct: 658 LSMIQHGAAKVFNKDSDGDVVKSADDIQ--DDDIEAMLASGESRTRELNA-RYEKLGIDD 714
Query: 1220 NQEFTEEA 1227
Q+F+ E+
Sbjct: 715 LQKFSSES 722
Score = 45 (20.9 bits), Expect = 4.2e-59, Sum P(4) = 4.2e-59
Identities = 8/20 (40%), Positives = 12/20 (60%)
Query: 1091 SDWNPAMDQQAQDRCHRIGQ 1110
S+WN QQ + CH+ G+
Sbjct: 866 SEWNRRDFQQFVNGCHKFGR 885
Score = 41 (19.5 bits), Expect = 1.1e-58, Sum P(4) = 1.1e-58
Identities = 12/42 (28%), Positives = 19/42 (45%)
Query: 1194 EAALKCVEDEADYMALKRAEQEEAVDNQEFTEEAVGRPEDDE 1235
E K + D L E E+A+D QE + A E+++
Sbjct: 814 EIGYKVPLPDGDDATLSDREAEQALDQQEI-DNATPLTEEEQ 854
Score = 38 (18.4 bits), Expect = 4.2e-59, Sum P(4) = 4.2e-59
Identities = 9/17 (52%), Positives = 10/17 (58%)
Query: 890 VCDILQQKTVRRSYLYS 906
V DIL+ V R Y YS
Sbjct: 518 VLDILEDYCVFREYKYS 534
Score = 38 (18.4 bits), Expect = 2.2e-58, Sum P(4) = 2.2e-58
Identities = 13/54 (24%), Positives = 19/54 (35%)
Query: 1075 GVGINLVGADTVIFYDSDWNPAMDQQAQDRCHRIGQTREVHIYRLISESTIEEN 1128
G + L D D + A+DQQ D + + + L E E N
Sbjct: 816 GYKVPLPDGDDATLSDREAEQALDQQEIDNATPLTEEEQQRKQELSEEGFSEWN 869
Score = 38 (18.4 bits), Expect = 6.1e-32, Sum P(3) = 6.1e-32
Identities = 8/18 (44%), Positives = 12/18 (66%)
Query: 64 LLGQTERYSSMLAENLVD 81
L G E ++++AE LVD
Sbjct: 266 LQGAKEERAALIAERLVD 283
Score = 37 (18.1 bits), Expect = 3.1e-99, Sum P(3) = 3.1e-99
Identities = 12/30 (40%), Positives = 15/30 (50%)
Query: 1672 LKVTEDNVRTLLNVAAEQEDNELLLQ--KH 1699
LK+ T V E+ED LL+Q KH
Sbjct: 958 LKINYSVSTTNKKVYTEEEDRFLLVQLDKH 987
>CGD|CAL0005444 [details] [associations]
symbol:SNF2 species:5476 "Candida albicans" [GO:0016514
"SWI/SNF complex" evidence=IPI] [GO:0009405 "pathogenesis"
evidence=IMP] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IMP] [GO:0008094 "DNA-dependent ATPase
activity" evidence=IEA] [GO:0001102 "RNA polymerase II activating
transcription factor binding" evidence=IEA] [GO:0070577 "histone
acetyl-lysine binding" evidence=IEA] [GO:0031492 "nucleosomal DNA
binding" evidence=IEA] [GO:0016586 "RSC complex" evidence=IEA]
[GO:0044182 "filamentous growth of a population of unicellular
organisms" evidence=IMP] [GO:1900430 "positive regulation of
filamentous growth of a population of unicellular organisms"
evidence=IMP] [GO:0036178 "filamentous growth of a population of
unicellular organisms in response to neutral pH" evidence=IMP]
[GO:1900442 "positive regulation of filamentous growth of a
population of unicellular organisms in response to neutral pH"
evidence=IMP] [GO:0036180 "filamentous growth of a population of
unicellular organisms in response to biotic stimulus" evidence=IMP]
[GO:1900445 "positive regulation of filamentous growth of a
population of unicellular organisms in response to biotic stimulus"
evidence=IMP] [GO:0042766 "nucleosome mobilization" evidence=IEA]
[GO:0005987 "sucrose catabolic process" evidence=IEA] [GO:1900231
"regulation of single-species biofilm formation on inanimate
substrate" evidence=IEA] [GO:0006366 "transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0042148 "strand invasion"
evidence=IEA] [GO:0044109 "cellular alcohol catabolic process"
evidence=IEA] [GO:0006302 "double-strand break repair"
evidence=IEA] [GO:0031496 "positive regulation of mating type
switching" evidence=IEA] [GO:0043044 "ATP-dependent chromatin
remodeling" evidence=IEA] [GO:0006261 "DNA-dependent DNA
replication" evidence=IEA] [GO:0061412 "positive regulation of
transcription from RNA polymerase II promoter in response to amino
acid starvation" evidence=IEA] [GO:0036244 "cellular response to
neutral pH" evidence=IMP] [GO:0071216 "cellular response to biotic
stimulus" evidence=IMP] [GO:0030447 "filamentous growth"
evidence=IMP] InterPro:IPR000330 InterPro:IPR001487
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 Pfam:PF00439
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297
SMART:SM00490 CGD:CAL0005444 GO:GO:0005524 GO:GO:0071216
GO:GO:0036244 GO:GO:0036180 GO:GO:0036178 GO:GO:0009405
GO:GO:1900445 GO:GO:1900442 GO:GO:0006355 GO:GO:0003677
GO:GO:0016514 GO:GO:0004386 EMBL:AACQ01000007 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 PROSITE:PS51204 KO:K11786
RefSeq:XP_722570.1 ProteinModelPortal:Q5AM49 MINT:MINT-2832160
STRING:Q5AM49 GeneID:3635855 KEGG:cal:CaO19.1526 Uniprot:Q5AM49
Length = 1690
Score = 663 (238.4 bits), Expect = 5.7e-99, Sum P(3) = 5.7e-99
Identities = 140/319 (43%), Positives = 203/319 (63%)
Query: 445 TKFP-FLLKFPLREYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTIAMLAHLACEKGI 503
TK P L+ L+EYQ GL W+V+++ LNGILADEMGLGKTI TI++L +L K I
Sbjct: 770 TKQPSILVGGTLKEYQLKGLQWMVSLFNNHLNGILADEMGLGKTIQTISLLTYLVEVKKI 829
Query: 504 WGPHLIVVPTSVMLNWETEFLKWCPAFKILTYFGSAKERKFKRQGWLKPNSFHVCITTYR 563
GP L++VP S + NW EF KW P+ K +TY G+ +RK + ++ +F + +TT+
Sbjct: 830 PGPFLVIVPLSTVTNWNLEFEKWAPSIKKITYKGTPNQRKVMQHD-IRTGNFQLVLTTFE 888
Query: 564 LIIQDSKVFKRKKWKYLILDEAHLIKNWKSQRWQTLL-NFNSKRRILLTGTPLQNDLMEL 622
+I+D + R KW ++I+DE H +KN S+ +TL N++S R++LTGTPLQN+L EL
Sbjct: 889 YVIKDKGLLGRIKWVHMIIDEGHRMKNANSKLSETLTQNYHSDYRLILTGTPLQNNLPEL 948
Query: 623 WSLMHFLMPHIFQSHQEFKDWFCNPISGMVEGQEKVN--KE----VVDRLHNVLRPFILR 676
W+L++F++P IF S + F +WF P + GQ+K+ +E V+ RLH VLRPF+LR
Sbjct: 949 WALLNFVLPKIFNSVKSFDEWFNTPFAN-TGGQDKIELTEEETLLVIRRLHKVLRPFLLR 1007
Query: 677 RLKRDVEKQLPMKQEHVIYCRLSKRQRNLYEDFI----------ASSETQATLASANFFG 726
RLK+DVEK LP K E V+ C+ S Q LY+ + A+ T+ +AN
Sbjct: 1008 RLKKDVEKDLPNKVEKVVKCKSSALQSKLYQQMLRYNMLYAGDPANGSVPVTIKNAN--- 1064
Query: 727 MISVIMQLRKVCNHPDLFE 745
+ IMQL+K+CNHP ++E
Sbjct: 1065 --NQIMQLKKICNHPFVYE 1081
Score = 425 (154.7 bits), Expect = 5.7e-99, Sum P(3) = 5.7e-99
Identities = 98/259 (37%), Positives = 159/259 (61%)
Query: 996 GKLQELAILLRKLKSDGHRALIFTQMTKMLDILEEFISLYGYTYMRLDGSTQPEERQTLM 1055
GK + L +L K K+ GH+ LIF QMT++++I+E+F+ G YMRLDG T+ ++R L+
Sbjct: 1102 GKFELLDKVLPKFKATGHKVLIFFQMTQIMNIMEDFLRFRGMKYMRLDGGTKADDRTDLL 1161
Query: 1056 QRFNT-NPKIFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQDRCHRIGQTREV 1114
+ FN + F F+LSTR+GG+G+NL ADTVI +D+DWNP D QAQDR HRIGQ EV
Sbjct: 1162 KSFNAPDSDYFCFLLSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQKNEV 1221
Query: 1115 HIYRLISESTIEENILKKANQKRALDDLVIQSGGY-NTEFFKKLDPM--ELFSGHRTLPM 1171
I RLI+E+++EE IL++A++K +D VIQ+G + N ++ + M L
Sbjct: 1222 RILRLITENSVEEMILERAHKKLEIDGKVIQAGKFDNKSTAEEQEAMLRALIEKEDERRQ 1281
Query: 1172 K--TMQKEKAINNG--NEVSLSNADVEAALKCVEDEADYMALKRAEQEEAVDNQEFTEEA 1227
K T ++E+ +++ N++ N + + +++E Y+A K A + +E E
Sbjct: 1282 KGGTDEEEEDLDDDELNQIIARNENELVVFRKMDEER-YLATKNAPYPSRLYTEEELPE- 1339
Query: 1228 VGRPEDDELVIEDTVRTDE 1246
+ + + +EL ++ V ++E
Sbjct: 1340 IYKIDPEELFKKEDVASEE 1358
Score = 50 (22.7 bits), Expect = 5.7e-99, Sum P(3) = 5.7e-99
Identities = 17/61 (27%), Positives = 27/61 (44%)
Query: 1441 LTSESKAVKEEPSVEPMSIDDDFYDEDATFSDA---MSPPSTSQKKRKKAELALYDDEER 1497
LT E K E V D+D D + SD+ P ++ +K ++A +DEE
Sbjct: 1375 LTEEQWLKKIEGMVSDDDDDNDDDDGNVDMSDSEMEAKPKKPKGRRGRKPKVARVEDEES 1434
Query: 1498 E 1498
+
Sbjct: 1435 Q 1435
Score = 42 (19.8 bits), Expect = 8.6e-59, Sum P(3) = 8.6e-59
Identities = 21/93 (22%), Positives = 38/93 (40%)
Query: 1185 EVSLSNADVEAALKCVEDEADYMALKRAEQEEAVDNQEFTEEAVGRPEDDELVIEDTVRT 1244
E S+ +E A K +E + + + + + + QE A+ ED+ T
Sbjct: 1229 ENSVEEMILERAHKKLEIDGKVIQAGKFDNKSTAEEQEAMLRALIEKEDERRQKGGTDEE 1288
Query: 1245 DEPTDQGGC--MTANNDNGMMLTGNDPKEERAL 1275
+E D + A N+N +++ EER L
Sbjct: 1289 EEDLDDDELNQIIARNENELVVF-RKMDEERYL 1320
Score = 39 (18.8 bits), Expect = 8.2e-98, Sum P(3) = 8.2e-98
Identities = 13/35 (37%), Positives = 17/35 (48%)
Query: 1462 DFYDEDATFSDAMSPPSTSQKKRKKAELALYDDEE 1496
DF + D FS PST+ K +A+L D E
Sbjct: 1632 DFAEFDEMFSLKPLVPSTAIKHPIEAKLEKIDKGE 1666
Score = 38 (18.4 bits), Expect = 1.0e-97, Sum P(3) = 1.0e-97
Identities = 18/63 (28%), Positives = 30/63 (47%)
Query: 1905 TSMEHSEIQHSSPEPV-SNQSVATKDAN--------LRFD--LIQEAWLEDMDGGRLSCM 1953
T E EI PE + + VA+++ L++D L +E WL+ ++G +S
Sbjct: 1333 TEEELPEIYKIDPEELFKKEDVASEEYGRGARERKILQYDDNLTEEQWLKKIEG-MVSDD 1391
Query: 1954 DQD 1956
D D
Sbjct: 1392 DDD 1394
Score = 37 (18.1 bits), Expect = 1.3e-32, Sum P(3) = 1.3e-32
Identities = 6/16 (37%), Positives = 10/16 (62%)
Query: 212 VVEEGHVQGNGNDLLA 227
+++EGH N N L+
Sbjct: 906 IIDEGHRMKNANSKLS 921
>UNIPROTKB|Q5AM49 [details] [associations]
symbol:SNF2 "Putative uncharacterized protein SNF2"
species:237561 "Candida albicans SC5314" [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0009405
"pathogenesis" evidence=IMP] [GO:0016514 "SWI/SNF complex"
evidence=IPI] [GO:0030447 "filamentous growth" evidence=IMP]
[GO:0036178 "filamentous growth of a population of unicellular
organisms in response to neutral pH" evidence=IMP] [GO:0036180
"filamentous growth of a population of unicellular organisms in
response to biotic stimulus" evidence=IMP] [GO:0036244 "cellular
response to neutral pH" evidence=IMP] [GO:0044182 "filamentous
growth of a population of unicellular organisms" evidence=IMP]
[GO:0071216 "cellular response to biotic stimulus" evidence=IMP]
[GO:1900430 "positive regulation of filamentous growth of a
population of unicellular organisms" evidence=IMP] [GO:1900442
"positive regulation of filamentous growth of a population of
unicellular organisms in response to neutral pH" evidence=IMP]
[GO:1900445 "positive regulation of filamentous growth of a
population of unicellular organisms in response to biotic stimulus"
evidence=IMP] InterPro:IPR000330 InterPro:IPR001487
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 Pfam:PF00439
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297
SMART:SM00490 CGD:CAL0005444 GO:GO:0005524 GO:GO:0071216
GO:GO:0036244 GO:GO:0036180 GO:GO:0036178 GO:GO:0009405
GO:GO:1900445 GO:GO:1900442 GO:GO:0006355 GO:GO:0003677
GO:GO:0016514 GO:GO:0004386 EMBL:AACQ01000007 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 PROSITE:PS51204 KO:K11786
RefSeq:XP_722570.1 ProteinModelPortal:Q5AM49 MINT:MINT-2832160
STRING:Q5AM49 GeneID:3635855 KEGG:cal:CaO19.1526 Uniprot:Q5AM49
Length = 1690
Score = 663 (238.4 bits), Expect = 5.7e-99, Sum P(3) = 5.7e-99
Identities = 140/319 (43%), Positives = 203/319 (63%)
Query: 445 TKFP-FLLKFPLREYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTIAMLAHLACEKGI 503
TK P L+ L+EYQ GL W+V+++ LNGILADEMGLGKTI TI++L +L K I
Sbjct: 770 TKQPSILVGGTLKEYQLKGLQWMVSLFNNHLNGILADEMGLGKTIQTISLLTYLVEVKKI 829
Query: 504 WGPHLIVVPTSVMLNWETEFLKWCPAFKILTYFGSAKERKFKRQGWLKPNSFHVCITTYR 563
GP L++VP S + NW EF KW P+ K +TY G+ +RK + ++ +F + +TT+
Sbjct: 830 PGPFLVIVPLSTVTNWNLEFEKWAPSIKKITYKGTPNQRKVMQHD-IRTGNFQLVLTTFE 888
Query: 564 LIIQDSKVFKRKKWKYLILDEAHLIKNWKSQRWQTLL-NFNSKRRILLTGTPLQNDLMEL 622
+I+D + R KW ++I+DE H +KN S+ +TL N++S R++LTGTPLQN+L EL
Sbjct: 889 YVIKDKGLLGRIKWVHMIIDEGHRMKNANSKLSETLTQNYHSDYRLILTGTPLQNNLPEL 948
Query: 623 WSLMHFLMPHIFQSHQEFKDWFCNPISGMVEGQEKVN--KE----VVDRLHNVLRPFILR 676
W+L++F++P IF S + F +WF P + GQ+K+ +E V+ RLH VLRPF+LR
Sbjct: 949 WALLNFVLPKIFNSVKSFDEWFNTPFAN-TGGQDKIELTEEETLLVIRRLHKVLRPFLLR 1007
Query: 677 RLKRDVEKQLPMKQEHVIYCRLSKRQRNLYEDFI----------ASSETQATLASANFFG 726
RLK+DVEK LP K E V+ C+ S Q LY+ + A+ T+ +AN
Sbjct: 1008 RLKKDVEKDLPNKVEKVVKCKSSALQSKLYQQMLRYNMLYAGDPANGSVPVTIKNAN--- 1064
Query: 727 MISVIMQLRKVCNHPDLFE 745
+ IMQL+K+CNHP ++E
Sbjct: 1065 --NQIMQLKKICNHPFVYE 1081
Score = 425 (154.7 bits), Expect = 5.7e-99, Sum P(3) = 5.7e-99
Identities = 98/259 (37%), Positives = 159/259 (61%)
Query: 996 GKLQELAILLRKLKSDGHRALIFTQMTKMLDILEEFISLYGYTYMRLDGSTQPEERQTLM 1055
GK + L +L K K+ GH+ LIF QMT++++I+E+F+ G YMRLDG T+ ++R L+
Sbjct: 1102 GKFELLDKVLPKFKATGHKVLIFFQMTQIMNIMEDFLRFRGMKYMRLDGGTKADDRTDLL 1161
Query: 1056 QRFNT-NPKIFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQDRCHRIGQTREV 1114
+ FN + F F+LSTR+GG+G+NL ADTVI +D+DWNP D QAQDR HRIGQ EV
Sbjct: 1162 KSFNAPDSDYFCFLLSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQKNEV 1221
Query: 1115 HIYRLISESTIEENILKKANQKRALDDLVIQSGGY-NTEFFKKLDPM--ELFSGHRTLPM 1171
I RLI+E+++EE IL++A++K +D VIQ+G + N ++ + M L
Sbjct: 1222 RILRLITENSVEEMILERAHKKLEIDGKVIQAGKFDNKSTAEEQEAMLRALIEKEDERRQ 1281
Query: 1172 K--TMQKEKAINNG--NEVSLSNADVEAALKCVEDEADYMALKRAEQEEAVDNQEFTEEA 1227
K T ++E+ +++ N++ N + + +++E Y+A K A + +E E
Sbjct: 1282 KGGTDEEEEDLDDDELNQIIARNENELVVFRKMDEER-YLATKNAPYPSRLYTEEELPE- 1339
Query: 1228 VGRPEDDELVIEDTVRTDE 1246
+ + + +EL ++ V ++E
Sbjct: 1340 IYKIDPEELFKKEDVASEE 1358
Score = 50 (22.7 bits), Expect = 5.7e-99, Sum P(3) = 5.7e-99
Identities = 17/61 (27%), Positives = 27/61 (44%)
Query: 1441 LTSESKAVKEEPSVEPMSIDDDFYDEDATFSDA---MSPPSTSQKKRKKAELALYDDEER 1497
LT E K E V D+D D + SD+ P ++ +K ++A +DEE
Sbjct: 1375 LTEEQWLKKIEGMVSDDDDDNDDDDGNVDMSDSEMEAKPKKPKGRRGRKPKVARVEDEES 1434
Query: 1498 E 1498
+
Sbjct: 1435 Q 1435
Score = 42 (19.8 bits), Expect = 8.6e-59, Sum P(3) = 8.6e-59
Identities = 21/93 (22%), Positives = 38/93 (40%)
Query: 1185 EVSLSNADVEAALKCVEDEADYMALKRAEQEEAVDNQEFTEEAVGRPEDDELVIEDTVRT 1244
E S+ +E A K +E + + + + + + QE A+ ED+ T
Sbjct: 1229 ENSVEEMILERAHKKLEIDGKVIQAGKFDNKSTAEEQEAMLRALIEKEDERRQKGGTDEE 1288
Query: 1245 DEPTDQGGC--MTANNDNGMMLTGNDPKEERAL 1275
+E D + A N+N +++ EER L
Sbjct: 1289 EEDLDDDELNQIIARNENELVVF-RKMDEERYL 1320
Score = 39 (18.8 bits), Expect = 8.2e-98, Sum P(3) = 8.2e-98
Identities = 13/35 (37%), Positives = 17/35 (48%)
Query: 1462 DFYDEDATFSDAMSPPSTSQKKRKKAELALYDDEE 1496
DF + D FS PST+ K +A+L D E
Sbjct: 1632 DFAEFDEMFSLKPLVPSTAIKHPIEAKLEKIDKGE 1666
Score = 38 (18.4 bits), Expect = 1.0e-97, Sum P(3) = 1.0e-97
Identities = 18/63 (28%), Positives = 30/63 (47%)
Query: 1905 TSMEHSEIQHSSPEPV-SNQSVATKDAN--------LRFD--LIQEAWLEDMDGGRLSCM 1953
T E EI PE + + VA+++ L++D L +E WL+ ++G +S
Sbjct: 1333 TEEELPEIYKIDPEELFKKEDVASEEYGRGARERKILQYDDNLTEEQWLKKIEG-MVSDD 1391
Query: 1954 DQD 1956
D D
Sbjct: 1392 DDD 1394
Score = 37 (18.1 bits), Expect = 1.3e-32, Sum P(3) = 1.3e-32
Identities = 6/16 (37%), Positives = 10/16 (62%)
Query: 212 VVEEGHVQGNGNDLLA 227
+++EGH N N L+
Sbjct: 906 IIDEGHRMKNANSKLS 921
>UNIPROTKB|D4AA07 [details] [associations]
symbol:Smarca4 "Transcription activator BRG1" species:10116
"Rattus norvegicus" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271 Pfam:PF07533
PROSITE:PS51194 SMART:SM00490 SMART:SM00592 RGD:621728
GO:GO:0005524 GO:GO:0003677 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR013999 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 SMART:SM00573 PROSITE:PS51204
OrthoDB:EOG418BMJ IPI:IPI00915110 Ensembl:ENSRNOT00000060926
ArrayExpress:D4AA07 Uniprot:D4AA07
Length = 1262
Score = 657 (236.3 bits), Expect = 8.8e-99, Sum P(3) = 8.8e-99
Identities = 144/318 (45%), Positives = 200/318 (62%)
Query: 440 TTQVRTKFPFLLKFPLREYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTIAMLAHLAC 499
T +V + ++ L++YQ GL+WLV++Y LNGILADEMGLGKTI TIA++ +L
Sbjct: 538 TERVDKQSALMVNGVLKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIALITYLME 597
Query: 500 EKGIWGPHLIVVPTSVMLNWETEFLKWCPAFKILTYFGS-AKERKFKRQGWLKPNSFHVC 558
K I GP LI+VP S + NW EF KW P+ ++Y GS A R F Q L+ F+V
Sbjct: 598 HKRINGPFLIIVPLSTLSNWAYEFDKWAPSVVKVSYKGSPAARRAFVPQ--LRSGKFNVL 655
Query: 559 ITTYRLIIQDSKVFKRKKWKYLILDEAHLIKNWKSQRWQTL-LNFNSKRRILLTGTPLQN 617
+TTY II+D + + +WKY+I+DE H +KN + Q L ++ + RR+LLTGTPLQN
Sbjct: 656 LTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRLLLTGTPLQN 715
Query: 618 DLMELWSLMHFLMPHIFQSHQEFKDWFCNPISGMVEGQEKVNKE----VVDRLHNVLRPF 673
L ELW+L++FL+P IF+S F+ WF P + M + +N+E ++ RLH VLRPF
Sbjct: 716 KLPELWALLNFLLPTIFKSCSTFEQWFNAPFA-MTGEKVDLNEEETILIIRRLHKVLRPF 774
Query: 674 ILRRLKRDVEKQLPMKQEHVIYCRLSKRQRNLYEDFIASSE--TQATLASANFFG----M 727
+LRRLK++VE QLP K E+VI C +S QR LY A T + G +
Sbjct: 775 LLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVLLTDGSEKDKKGKGGTKTL 834
Query: 728 ISVIMQLRKVCNHPDLFE 745
++ IMQLRK+CNHP +F+
Sbjct: 835 MNTIMQLRKICNHPYMFQ 852
Score = 390 (142.3 bits), Expect = 8.8e-99, Sum P(3) = 8.8e-99
Identities = 74/156 (47%), Positives = 109/156 (69%)
Query: 996 GKLQELAILLRKLKSDGHRALIFTQMTKMLDILEEFISLYGYTYMRLDGSTQPEERQTLM 1055
GK + L +L KL++ H+ L+F QMT ++ I+E++ + G+ Y+RLDG+T+ E+R L+
Sbjct: 879 GKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLL 938
Query: 1056 QRFNT-NPKIFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQDRCHRIGQTREV 1114
+ FN + F+F+LSTR+GG+G+NL ADTVI +DSDWNP D QAQDR HRIGQ EV
Sbjct: 939 KTFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEV 998
Query: 1115 HIYRLISESTIEENILKKANQKRALDDLVIQSGGYN 1150
+ RL + +++EE IL A K +D VIQ+G ++
Sbjct: 999 RVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFD 1034
Score = 80 (33.2 bits), Expect = 8.8e-99, Sum P(3) = 8.8e-99
Identities = 29/106 (27%), Positives = 51/106 (48%)
Query: 25 NISKDVKKFWMKIEKLVLYKHQMEVDVRKKKALD----KQLEFLLGQTERYSSMLAENLV 80
N ++ KK +IEK + + E + +K +D K+L +LL QT+ Y + L E LV
Sbjct: 309 NTEREQKKENERIEKERMRRLMAEDEEGYRKLIDQKKDKRLAYLLQQTDEYVANLTE-LV 367
Query: 81 DSHKPVQQSPMREQPGIQYKEADENGAEEPGVQSKEADEDDAEQHS 126
HK Q + +++ + K+A+ + P + D+ Q S
Sbjct: 368 RQHKAAQVAKEKKKKK-KKKKAENAEGQTPAIGPDGEPLDETSQMS 412
Score = 49 (22.3 bits), Expect = 1.6e-95, Sum P(3) = 1.6e-95
Identities = 15/53 (28%), Positives = 25/53 (47%)
Query: 81 DSHKPVQQSPMREQ-PGIQYKEADENGAEEPGVQSKEADEDDAEQHSGFEPQL 132
D+ K Q E PG Y+ A + +EE G + +E +E++ + P L
Sbjct: 431 DAPKAGQLEAWLEMNPG--YEVAPRSDSEESGSEEEEEEEEEEQPQPAQPPTL 481
>FB|FBgn0000212 [details] [associations]
symbol:brm "brahma" species:7227 "Drosophila melanogaster"
[GO:0043044 "ATP-dependent chromatin remodeling" evidence=ISS;IDA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS;IDA] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0008094 "DNA-dependent ATPase activity" evidence=NAS]
[GO:0003713 "transcription coactivator activity" evidence=ISS;NAS]
[GO:0005634 "nucleus" evidence=IDA;NAS] [GO:0048096
"chromatin-mediated maintenance of transcription" evidence=NAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0035060 "brahma
complex" evidence=IDA;TAS] [GO:0048477 "oogenesis" evidence=TAS]
[GO:0045749 "negative regulation of S phase of mitotic cell cycle"
evidence=IGI] [GO:0035172 "hemocyte proliferation" evidence=TAS]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0007474 "imaginal disc-derived wing vein specification"
evidence=IMP] [GO:0048666 "neuron development" evidence=IMP]
[GO:0007517 "muscle organ development" evidence=IMP] [GO:0048813
"dendrite morphogenesis" evidence=IMP] [GO:0006911 "phagocytosis,
engulfment" evidence=IMP] [GO:0007409 "axonogenesis" evidence=IMP]
[GO:0007480 "imaginal disc-derived leg morphogenesis" evidence=IGI]
[GO:0008586 "imaginal disc-derived wing vein morphogenesis"
evidence=IMP] [GO:0008587 "imaginal disc-derived wing margin
morphogenesis" evidence=IMP] [GO:0045742 "positive regulation of
epidermal growth factor receptor signaling pathway" evidence=IMP]
[GO:0070983 "dendrite guidance" evidence=IMP] [GO:0022008
"neurogenesis" evidence=IMP] [GO:0043974 "histone H3-K27
acetylation" evidence=IMP] InterPro:IPR000330 InterPro:IPR001487
InterPro:IPR001650 InterPro:IPR006576 InterPro:IPR014978
Pfam:PF00176 Pfam:PF00271 Pfam:PF00439 Pfam:PF07533 Pfam:PF08880
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297
SMART:SM00490 SMART:SM00592 SMART:SM00951 GO:GO:0005524
GO:GO:0045893 GO:GO:0006911 EMBL:AE014296 GO:GO:0003677
GO:GO:0008586 GO:GO:0007474 GO:GO:0048477 GO:GO:0006351
GO:GO:0016887 GO:GO:0007517 GO:GO:0007409 GO:GO:0004386
GO:GO:0045742 GO:GO:0007480 GO:GO:0045749 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0043044
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 GO:GO:0008587 KO:K11647 EMBL:M85049
EMBL:AY095048 EMBL:BT009972 PIR:A42091 RefSeq:NP_536745.4
RefSeq:NP_536746.1 RefSeq:NP_730088.1 RefSeq:NP_730089.1
UniGene:Dm.5356 ProteinModelPortal:P25439 SMR:P25439 DIP:DIP-36728N
IntAct:P25439 MINT:MINT-6541230 STRING:P25439 PaxDb:P25439
EnsemblMetazoa:FBtr0075525 EnsemblMetazoa:FBtr0075526 GeneID:39744
KEGG:dme:Dmel_CG5942 CTD:39744 FlyBase:FBgn0000212
GeneTree:ENSGT00550000074659 InParanoid:P25439 OMA:QKKYTIS
OrthoDB:EOG4K3JB3 PhylomeDB:P25439 ChiTaRS:SMARCA2 GenomeRNAi:39744
NextBio:815155 Bgee:P25439 GermOnline:CG5942 GO:GO:0035060
GO:GO:0070983 GO:GO:0035172 GO:GO:0043974 InterPro:IPR013999
InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529 SMART:SM00573
PROSITE:PS51204 Uniprot:P25439
Length = 1638
Score = 658 (236.7 bits), Expect = 1.4e-98, Sum P(4) = 1.4e-98
Identities = 134/302 (44%), Positives = 194/302 (64%)
Query: 455 LREYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTIAMLAHLACEKGIWGPHLIVVPTS 514
L+EYQ GL+WLV++Y LNGILADEMGLGKTI TI+++ +L K + GP+LI+VP S
Sbjct: 773 LKEYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTISLVTYLMDRKKVMGPYLIIVPLS 832
Query: 515 VMLNWETEFLKWCPAFKILTYFGSAKERKFKRQGWLKPNSFHVCITTYRLIIQDSKVFKR 574
+ NW EF KW PA +++Y GS + R+ Q ++ F+V +TTY +I+D V +
Sbjct: 833 TLPNWVLEFEKWAPAVGVVSYKGSPQGRRLL-QNQMRATKFNVLLTTYEYVIKDKAVLAK 891
Query: 575 KKWKYLILDEAHLIKNWKSQRWQTL-LNFNSKRRILLTGTPLQNDLMELWSLMHFLMPHI 633
+WKY+I+DE H +KN + Q L ++ + R+LLTGTPLQN L ELW+L++FL+P I
Sbjct: 892 IQWKYMIIDEGHRMKNHHCKLTQVLNTHYIAPYRLLLTGTPLQNKLPELWALLNFLLPSI 951
Query: 634 FQSHQEFKDWFCNPISGMVEGQEKVNKE----VVDRLHNVLRPFILRRLKRDVEKQLPMK 689
F+S F+ WF P + E E +N+E ++ RLH VLRPF+LRRLK++VE QLP K
Sbjct: 952 FKSCSTFEQWFNAPFATTGEKVE-LNEEETILIIRRLHKVLRPFLLRRLKKEVEHQLPDK 1010
Query: 690 QEHVIYCRLSKRQRNLYEDF------IASSETQATLASANFFGMISVIMQLRKVCNHPDL 743
E++I C +S QR LY+ + + +++ I+QLRK+CNHP +
Sbjct: 1011 VEYIIKCDMSALQRVLYKHMQSKGVLLTDGSEKGKHGKGGAKALMNTIVQLRKLCNHPFM 1070
Query: 744 FE 745
F+
Sbjct: 1071 FQ 1072
Score = 392 (143.0 bits), Expect = 1.4e-98, Sum P(4) = 1.4e-98
Identities = 74/156 (47%), Positives = 111/156 (71%)
Query: 996 GKLQELAILLRKLKSDGHRALIFTQMTKMLDILEEFISLYGYTYMRLDGSTQPEERQTLM 1055
GK + L +L KLK+ HR L+F QMT+ + I+E+++ + Y+RLDG+T+ E+R L+
Sbjct: 1098 GKFELLDRILPKLKATNHRVLLFCQMTQCMTIIEDYLGWRQFGYLRLDGTTKAEDRGELL 1157
Query: 1056 QRFNTNPK-IFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQDRCHRIGQTREV 1114
++FN +F+F+LSTR+GG+G+NL ADTV+ +DSDWNP D QAQDR HRIGQ EV
Sbjct: 1158 RKFNAKGSDVFVFLLSTRAGGLGLNLQTADTVVIFDSDWNPHQDLQAQDRAHRIGQRNEV 1217
Query: 1115 HIYRLISESTIEENILKKANQKRALDDLVIQSGGYN 1150
+ RL++ +++EE IL A K +D+ VIQ+G ++
Sbjct: 1218 RVLRLMTVNSVEERILAAARYKLNMDEKVIQAGMFD 1253
Score = 83 (34.3 bits), Expect = 1.4e-98, Sum P(4) = 1.4e-98
Identities = 28/84 (33%), Positives = 44/84 (52%)
Query: 25 NISKDVKKFWMKIEKLVLYKHQMEVDVRKKKALD----KQLEFLLGQTERYSSMLAENLV 80
N ++ KK +IEK + + E + +K +D K+L FLL QT+ Y S L + +V
Sbjct: 551 NAEREQKKEQERIEKERMRRLMAEDEEGYRKLIDQKKDKRLAFLLSQTDEYISNLTQ-MV 609
Query: 81 DSHKPVQQSPMREQPG---IQYKE 101
HK Q +E+ G IQ+K+
Sbjct: 610 KQHKD-DQMKKKEEEGKRLIQFKK 632
Score = 51 (23.0 bits), Expect = 1.4e-98, Sum P(4) = 1.4e-98
Identities = 18/92 (19%), Positives = 40/92 (43%)
Query: 1762 KLLSAALHDANSRQQDDKVSNFDRREDGPVIEQLDLTLEFQ---RELVDSTISFPPRVNL 1818
++L+AA + N ++ + FD++ G +Q T+ Q E ++ + +N+
Sbjct: 1231 RILAAARYKLNMDEKVIQAGMFDQKSTGSERQQFLQTILHQDDNEEEEENEVPDDEMINM 1290
Query: 1819 SVYGSDLETSVNKSTRENHHLKDSQVAENRFR 1850
+ S+ E + K +D ++ R R
Sbjct: 1291 MIARSEEEIEIFKRMDAERKKEDEEIHPGRER 1322
Score = 44 (20.5 bits), Expect = 1.7e-94, Sum P(4) = 1.7e-94
Identities = 10/31 (32%), Positives = 16/31 (51%)
Query: 54 KKALDKQLEFLLGQTERYSSMLAENLVDSHK 84
++A+D E L + RYS +LA H+
Sbjct: 142 QRAIDSMEEKGLQEDPRYSQLLAMRATSKHQ 172
Score = 44 (20.5 bits), Expect = 5.4e-62, Sum P(3) = 5.4e-62
Identities = 11/37 (29%), Positives = 16/37 (43%)
Query: 1857 IEDSLGWASSAFPANDAKLRSVPKSQSLGKHKLSLSD 1893
IED LGW + D ++ + + L K SD
Sbjct: 1130 IEDYLGWRQFGYLRLDGTTKAEDRGELLRKFNAKGSD 1166
Score = 40 (19.1 bits), Expect = 2.0e-97, Sum P(4) = 2.0e-97
Identities = 22/125 (17%), Positives = 52/125 (41%)
Query: 1825 LETSVNKSTRENHHLKDSQVAENRFRDAARACIEDSLGWASSAFPANDAKLRSVPKSQSL 1884
L+T +++ +N ++++V ++ + A E+ + F DA+ + +
Sbjct: 1265 LQTILHQD--DNEEEEENEVPDDEMINMMIARSEEEI----EIFKRMDAERKKEDEEIHP 1318
Query: 1885 GKHKLSLSDSVKCPKSKLRKTS-MEHSEIQHSSPEPVSNQSVATKDANLRFDLIQEAWLE 1943
G+ +L D + P + +E Q+ + S K+ + L ++ WL+
Sbjct: 1319 GRERLI--DESELPDWLTKDDDEVERFHYQYDEDTILGRGSRQRKEVDYTDSLTEKEWLK 1376
Query: 1944 DMDGG 1948
+D G
Sbjct: 1377 AIDDG 1381
>WB|WBGene00002169 [details] [associations]
symbol:isw-1 species:6239 "Caenorhabditis elegans"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0031491 "nucleosome binding" evidence=IEA]
[GO:0043044 "ATP-dependent chromatin remodeling" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006338 "chromatin
remodeling" evidence=IEA] [GO:0016818 "hydrolase activity, acting
on acid anhydrides, in phosphorus-containing anhydrides"
evidence=IEA] [GO:0000003 "reproduction" evidence=IMP] [GO:0040010
"positive regulation of growth rate" evidence=IMP] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
[GO:0002009 "morphogenesis of an epithelium" evidence=IMP]
[GO:0040035 "hermaphrodite genitalia development" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0040027 "negative regulation of
vulval development" evidence=IMP] [GO:0016246 "RNA interference"
evidence=IMP] [GO:0008340 "determination of adult lifespan"
evidence=IMP] [GO:0000790 "nuclear chromatin" evidence=IDA]
[GO:0040026 "positive regulation of vulval development"
evidence=IGI] InterPro:IPR000330 InterPro:IPR001005
InterPro:IPR001650 InterPro:IPR009057 InterPro:IPR015194
InterPro:IPR015195 InterPro:IPR017956 Pfam:PF00176 Pfam:PF00271
Pfam:PF09110 Pfam:PF09111 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00384 SMART:SM00490 SMART:SM00717 GO:GO:0005524
GO:GO:0008340 GO:GO:0009792 GO:GO:0002009 GO:GO:0040007
GO:GO:0040010 GO:GO:0002119 GO:GO:0016246 GO:GO:0006355
GO:GO:0003677 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0000790 GO:GO:0040035 InterPro:IPR017884 PROSITE:PS51293
GO:GO:0004386 GO:GO:0040027 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0016585 GO:GO:0031491
GO:GO:0043044 GO:GO:0040026 EMBL:FO081312 PIR:S44645
RefSeq:NP_498468.2 ProteinModelPortal:P41877 SMR:P41877
STRING:P41877 PaxDb:P41877 EnsemblMetazoa:F37A4.8 GeneID:175944
KEGG:cel:CELE_F37A4.8 UCSC:F37A4.8 CTD:175944 WormBase:F37A4.8
GeneTree:ENSGT00680000100002 HOGENOM:HOG000192862 InParanoid:P41877
KO:K11654 OMA:MQRKWYK NextBio:890418 SUPFAM:SSF101224
Uniprot:P41877
Length = 1009
Score = 645 (232.1 bits), Expect = 2.8e-98, Sum P(3) = 2.8e-98
Identities = 129/304 (42%), Positives = 186/304 (61%)
Query: 446 KFPFLLKF-PLREYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTIAMLAHLACEKGIW 504
K PF ++ +R+YQ GL+WL ++ ++NGILADEMGLGKT+ TI+M+ ++ K
Sbjct: 122 KSPFYIENGEMRDYQVRGLNWLASLQHNKINGILADEMGLGKTLQTISMIGYMKHYKNKA 181
Query: 505 GPHLIVVPTSVMLNWETEFLKWCPAFKILTYFGSAKERKFKRQGWLKPNSFHVCITTYRL 564
PHL++VP S + NW EF KWCP+ + G R + + P F VC TTY +
Sbjct: 182 SPHLVIVPKSTLQNWANEFKKWCPSINAVVLIGDEAARNQVLRDVILPQKFDVCCTTYEM 241
Query: 565 IIQDSKVFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPLQNDLMELWS 624
+++ K+ W+Y+I+DEAH IKN KS+ +T+ NS+ R+L+TGTPLQN+L ELW+
Sbjct: 242 MLKVKTQLKKLNWRYIIIDEAHRIKNEKSKLSETVRELNSENRLLITGTPLQNNLHELWA 301
Query: 625 LMHFLMPHIFQSHQEFKDWFCNP-ISGMVEGQEKVNKEVVDRLHNVLRPFILRRLKRDVE 683
L++FL+P IF S +F WF N +SG N ++V RLH VL+PF+LRR+K DVE
Sbjct: 302 LLNFLLPDIFTSSDDFDSWFSNDAMSG--------NTDLVQRLHKVLQPFLLRRIKSDVE 353
Query: 684 KQLPMKQEHVIYCRLSKRQRNLYEDFIASS-ETQATLASANFFGMISVIMQLRKVCNHPD 742
K L K+E +Y LSK QR Y + + +++++M LRK NHP
Sbjct: 354 KSLLPKKEVKVYVGLSKMQREWYTKVLMKDIDIINGAGKVEKARLMNILMHLRKCVNHPY 413
Query: 743 LFEG 746
LF+G
Sbjct: 414 LFDG 417
Score = 421 (153.3 bits), Expect = 2.8e-98, Sum P(3) = 2.8e-98
Identities = 101/242 (41%), Positives = 146/242 (60%)
Query: 987 DRRLIQFDCGKLQELAILLRKLKSDGHRALIFTQMTKMLDILEEFISLYGYTYMRLDGST 1046
D+ L+ + GK+ L LL K K G R LIF+Q ++MLD+LE+F Y Y RLDGST
Sbjct: 427 DQHLVD-NSGKMVVLDKLLMKFKEQGSRVLIFSQFSRMLDLLEDFCWWRHYEYCRLDGST 485
Query: 1047 QPEERQTLMQRFNT-NPKIFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQDRC 1105
E+R ++ +N + K F+F+L+TR+GG+GINL AD VI YDSDWNP D QA DR
Sbjct: 486 PHEDRSNAIEAYNAPDSKKFIFMLTTRAGGLGINLATADVVIIYDSDWNPQSDLQAMDRA 545
Query: 1106 HRIGQTREVHIYRLISESTIEENILKKANQKRALDDLVIQSGGYNTEFFKKLDPMELFSG 1165
HRIGQ ++V ++RLI+E+T++E I++KA K LD++VIQ G + E K L ++ S
Sbjct: 546 HRIGQKKQVRVFRLITENTVDERIIEKAEAKLRLDNIVIQQGRMS-EAQKTLGKGDMISM 604
Query: 1166 HRTLPMKTMQ-KEKAINNGN-EVSLSNADVEAA-LKCVEDEADYMALKRAEQEEAVDNQE 1222
R + K+ I++ + + L A+V+ A L + D L+ E DN +
Sbjct: 605 IRHGAEQVFAAKDSTISDDDIDTILEKAEVKTAELNEKMGKIDENNLRNMTFE---DNAK 661
Query: 1223 FT 1224
FT
Sbjct: 662 FT 663
Score = 44 (20.5 bits), Expect = 2.8e-98, Sum P(3) = 2.8e-98
Identities = 23/81 (28%), Positives = 38/81 (46%)
Query: 47 MEVDVRKKK--ALD--KQLEFLLGQTERYSSMLAENLVDSHKPVQQSPMREQPGIQYKEA 102
MEVD + A D K+ E LL +TE +S L+ D+ K +P+ + + + +
Sbjct: 31 MEVDDEPESSDAADSFKRFERLLQKTENFSHCLSSG--DA-KLATGAPVDTKK--RGRPS 85
Query: 103 DENGAEEPGVQSKEADEDDAE 123
+NG + K E+D E
Sbjct: 86 KKNGIDGDHRHRKTEQEEDEE 106
>POMBASE|SPAC1250.01 [details] [associations]
symbol:snf21 "ATP-dependent DNA helicase Snf21"
species:4896 "Schizosaccharomyces pombe" [GO:0000790 "nuclear
chromatin" evidence=IC] [GO:0000991 "core RNA polymerase II binding
transcription factor activity" evidence=ISO] [GO:0003677 "DNA
binding" evidence=IC] [GO:0004003 "ATP-dependent DNA helicase
activity" evidence=ISS] [GO:0005524 "ATP binding" evidence=IC]
[GO:0005634 "nucleus" evidence=IDA] [GO:0006338 "chromatin
remodeling" evidence=ISO] [GO:0006366 "transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0016586 "RSC complex"
evidence=IDA] InterPro:IPR000330 InterPro:IPR001487
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 Pfam:PF00439
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297
SMART:SM00490 PomBase:SPAC1250.01 GO:GO:0005524 EMBL:CU329670
GenomeReviews:CU329670_GR GO:GO:0003677 GO:GO:0006338 GO:GO:0000790
GO:GO:0004003 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0016586 GO:GO:0000991 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359
InterPro:IPR013999 InterPro:IPR014012 InterPro:IPR006562
Pfam:PF07529 SMART:SM00573 PROSITE:PS51204 HOGENOM:HOG000172362
KO:K11786 EMBL:AB162438 PIR:T37561 RefSeq:NP_594861.1
ProteinModelPortal:Q9UTN6 DIP:DIP-48388N STRING:Q9UTN6
EnsemblFungi:SPAC1250.01.1 GeneID:2542638 KEGG:spo:SPAC1250.01
OMA:WAPSISA OrthoDB:EOG4D565R NextBio:20803687 Uniprot:Q9UTN6
Length = 1199
Score = 659 (237.0 bits), Expect = 3.4e-98, Sum P(3) = 3.4e-98
Identities = 141/335 (42%), Positives = 205/335 (61%)
Query: 436 ITFSTTQVRTKFP-FLLKFPLREYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTIAML 494
+ + +V T+ P L+ L+EYQ GL W++++Y LNGILADEMGLGKTI TI+++
Sbjct: 397 VAHNIREVVTEQPSILVGGKLKEYQLRGLQWMISLYNNHLNGILADEMGLGKTIQTISLI 456
Query: 495 AHLACEKGIWGPHLIVVPTSVMLNWETEFLKWCPAFKILTYFGSAKERKFKRQGWLKPNS 554
HL +K GP L++VP S + NW EF +W P+ + Y G + RK ++ ++
Sbjct: 457 THLIEKKRQNGPFLVIVPLSTLTNWTMEFERWAPSIVKIVYKGPPQVRKALHPQ-VRHSN 515
Query: 555 FHVCITTYRLIIQDSKVFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKR-RILLTGT 613
F V +TTY II+D + R KW Y+I+DE H +KN +S+ TL + S R R++LTGT
Sbjct: 516 FQVLLTTYEYIIKDRPLLSRIKWIYMIIDEGHRMKNTQSKLTNTLTTYYSSRYRLILTGT 575
Query: 614 PLQNDLMELWSLMHFLMPHIFQSHQEFKDWFCNPISGMVEGQEKVN--KE----VVDRLH 667
PLQN+L ELW+L++F++P IF S + F +WF P + GQ+K+ +E V+ RLH
Sbjct: 576 PLQNNLPELWALLNFVLPRIFNSIKSFDEWFNTPFAN-TGGQDKMELTEEESLLVIRRLH 634
Query: 668 NVLRPFILRRLKRDVEKQLPMKQEHVIYCRLSKRQRNLYEDFIASSET---QATLASANF 724
VLRPF+LRRLK+DVE +LP K E VI C++S Q+ LY A
Sbjct: 635 KVLRPFLLRRLKKDVEAELPDKVEKVIRCQMSGLQQKLYYQMKKHGMLYVEDAKRGKTGI 694
Query: 725 FGMISVIMQLRKVCNHPDLFEGRPIVSSFDMSGID 759
G+ + +MQL+K+CNHP +FE + S D +G +
Sbjct: 695 KGLQNTVMQLKKICNHPFVFED--VERSIDPTGFN 727
Score = 421 (153.3 bits), Expect = 3.4e-98, Sum P(3) = 3.4e-98
Identities = 109/267 (40%), Positives = 157/267 (58%)
Query: 996 GKLQELAILLRKLKSDGHRALIFTQMTKMLDILEEFISLYGYTYMRLDGSTQPEERQTLM 1055
GK + L +L KL GHR L+F QMT++++I+E+++ + Y+RLDGST+ ++R L+
Sbjct: 736 GKFELLDRILPKLFRSGHRILMFFQMTQIMNIMEDYLHYRQWRYLRLDGSTKADDRSKLL 795
Query: 1056 QRFNT-NPKIFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQDRCHRIGQTREV 1114
FN ++ LF+LSTR+GG+G+NL ADTVI +DSDWNP D QAQDR HRIGQT+EV
Sbjct: 796 GVFNDPTAEVNLFLLSTRAGGLGLNLQTADTVIIFDSDWNPHQDLQAQDRAHRIGQTKEV 855
Query: 1115 HIYRLISESTIEENILKKANQKRALDDLVIQSGGYNTEFFKKLDPMELFSGHRTLPMKTM 1174
IYRLI+E ++EENIL +A K +D VIQ+G +F K P E + R+L
Sbjct: 856 RIYRLITEKSVEENILARAQYKLDIDGKVIQAG----KFDNKSTPEEREAFLRSLLENEN 911
Query: 1175 QKEKAINNG-------NEVSLSNADVEAAL--KCVED-EADYMALKRAEQEEAVDNQEFT 1224
+E+ G NE+ L+ D E L + ED E + K E+E + E
Sbjct: 912 GEEENDEKGELDDDELNEI-LARGDDELRLFKQMTEDLERESPYGKNKEKERLIQVSELP 970
Query: 1225 EEAVGRPEDDELVIEDTVRTDEPTDQG 1251
E R E ++ D ++ +EP +G
Sbjct: 971 E-FYQREEPEKTT--DLLQ-EEPLGRG 993
Score = 39 (18.8 bits), Expect = 3.4e-98, Sum P(3) = 3.4e-98
Identities = 9/22 (40%), Positives = 13/22 (59%)
Query: 55 KALDKQLEFLLGQTERYSSMLA 76
+A D ++ LL QT+ Y LA
Sbjct: 340 QAKDTRITHLLRQTDHYLDSLA 361
>UNIPROTKB|P51531 [details] [associations]
symbol:SMARCA2 "Probable global transcription activator
SNF2L2" species:9606 "Homo sapiens" [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0007399
"nervous system development" evidence=IEA] [GO:0008285 "negative
regulation of cell proliferation" evidence=IEA] [GO:0035887 "aortic
smooth muscle cell differentiation" evidence=IEA] [GO:0016514
"SWI/SNF complex" evidence=IDA] [GO:0071564 "npBAF complex"
evidence=ISS] [GO:0071565 "nBAF complex" evidence=ISS] [GO:0005515
"protein binding" evidence=IPI] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IMP;IDA] [GO:0001105 "RNA
polymerase II transcription coactivator activity" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0044212 "transcription
regulatory region DNA binding" evidence=IDA] [GO:0003713
"transcription coactivator activity" evidence=TAS] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=TAS] [GO:0005654 "nucleoplasm" evidence=TAS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IDA;TAS] [GO:0071778 "WINAC
complex" evidence=IDA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0000790 "nuclear
chromatin" evidence=IDA] [GO:0030308 "negative regulation of cell
growth" evidence=IMP] [GO:0006338 "chromatin remodeling"
evidence=TAS] [GO:0008094 "DNA-dependent ATPase activity"
evidence=TAS] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=TAS] [GO:0005730
"nucleolus" evidence=IDA] [GO:0043231 "intracellular
membrane-bounded organelle" evidence=IDA] [GO:0045111 "intermediate
filament cytoskeleton" evidence=IDA] InterPro:IPR000330
InterPro:IPR001487 InterPro:IPR001650 InterPro:IPR006576
InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271 Pfam:PF00439
Pfam:PF07533 Pfam:PF08880 PRINTS:PR00503 PROSITE:PS50014
PROSITE:PS51194 SMART:SM00297 SMART:SM00490 SMART:SM00592
SMART:SM00951 GO:GO:0005524 GO:GO:0008285 GO:GO:0007399
GO:GO:0005654 GO:GO:0030308 GO:GO:0006338 GO:GO:0000122
GO:GO:0044212 GO:GO:0045111 GO:GO:0000790 GO:GO:0071564
GO:GO:0016514 GO:GO:0071565 EMBL:CH471071 GO:GO:0004386
Pathway_Interaction_DB:ar_tf_pathway GO:GO:0001105 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359 GO:GO:0071778
KO:K11647 ChiTaRS:SMARCA2 InterPro:IPR013999 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 SMART:SM00573 PROSITE:PS51204
GO:GO:0008094 EMBL:X72889 EMBL:D26155 EMBL:AL359076 EMBL:AL138755
IPI:IPI00386718 IPI:IPI00514648 PIR:S39580 PIR:S45251
RefSeq:NP_003061.3 RefSeq:NP_620614.2 UniGene:Hs.298990 PDB:2DAT
PDBsum:2DAT ProteinModelPortal:P51531 SMR:P51531 DIP:DIP-29005N
IntAct:P51531 MINT:MINT-1898892 STRING:P51531 PhosphoSite:P51531
DMDM:212276472 PaxDb:P51531 PRIDE:P51531 DNASU:6595
Ensembl:ENST00000349721 Ensembl:ENST00000357248
Ensembl:ENST00000382194 Ensembl:ENST00000382203 GeneID:6595
KEGG:hsa:6595 UCSC:uc003zhc.3 UCSC:uc003zhd.3 CTD:6595
GeneCards:GC09P002005 HGNC:HGNC:11098 HPA:HPA029981 MIM:600014
MIM:601358 neXtProt:NX_P51531 Orphanet:3051 PharmGKB:PA35948
HOGENOM:HOG000172363 HOVERGEN:HBG056636 InParanoid:P51531
OMA:PQEGMHQ PhylomeDB:P51531 EvolutionaryTrace:P51531
GenomeRNAi:6595 NextBio:25649 PMAP-CutDB:P51531 ArrayExpress:P51531
Bgee:P51531 CleanEx:HS_SMARCA2 Genevestigator:P51531
GermOnline:ENSG00000080503 GO:GO:0035887 Uniprot:P51531
Length = 1590
Score = 648 (233.2 bits), Expect = 5.2e-98, Sum P(4) = 5.2e-98
Identities = 140/316 (44%), Positives = 198/316 (62%)
Query: 442 QVRTKFPFLLKFPLREYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTIAMLAHLACEK 501
+V + L+ L+ YQ GL+W+V++Y LNGILADEMGLGKTI TIA++ +L K
Sbjct: 711 RVEKQSALLINGTLKHYQLQGLEWMVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHK 770
Query: 502 GIWGPHLIVVPTSVMLNWETEFLKWCPAFKILTYFGS-AKERKFKRQGWLKPNSFHVCIT 560
+ GP+LI+VP S + NW EF KW P+ ++Y G+ A R Q L+ F+V +T
Sbjct: 771 RLNGPYLIIVPLSTLSNWTYEFDKWAPSVVKISYKGTPAMRRSLVPQ--LRSGKFNVLLT 828
Query: 561 TYRLIIQDSKVFKRKKWKYLILDEAHLIKNWKSQRWQTL-LNFNSKRRILLTGTPLQNDL 619
TY II+D + + +WKY+I+DE H +KN + Q L ++ + RRILLTGTPLQN L
Sbjct: 829 TYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRILLTGTPLQNKL 888
Query: 620 MELWSLMHFLMPHIFQSHQEFKDWFCNPISGMVEGQEKVNKE----VVDRLHNVLRPFIL 675
ELW+L++FL+P IF+S F+ WF P + M + +N+E ++ RLH VLRPF+L
Sbjct: 889 PELWALLNFLLPTIFKSCSTFEQWFNAPFA-MTGERVDLNEEETILIIRRLHKVLRPFLL 947
Query: 676 RRLKRDVEKQLPMKQEHVIYCRLSKRQRNLYEDFIASSE--TQATLASANFFG----MIS 729
RRLK++VE QLP K E+VI C +S Q+ LY A T + G +++
Sbjct: 948 RRLKKEVESQLPEKVEYVIKCDMSALQKILYRHMQAKGILLTDGSEKDKKGKGGAKTLMN 1007
Query: 730 VIMQLRKVCNHPDLFE 745
IMQLRK+CNHP +F+
Sbjct: 1008 TIMQLRKICNHPYMFQ 1023
Score = 392 (143.0 bits), Expect = 5.2e-98, Sum P(4) = 5.2e-98
Identities = 73/156 (46%), Positives = 109/156 (69%)
Query: 996 GKLQELAILLRKLKSDGHRALIFTQMTKMLDILEEFISLYGYTYMRLDGSTQPEERQTLM 1055
GK + L +L KL++ HR L+F QMT ++ I+E++ + + Y+RLDG+T+ E+R L+
Sbjct: 1050 GKFELLDRILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRLDGTTKSEDRAALL 1109
Query: 1056 QRFNT-NPKIFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQDRCHRIGQTREV 1114
++FN + F+F+LSTR+GG+G+NL ADTV+ +DSDWNP D QAQDR HRIGQ EV
Sbjct: 1110 KKFNEPGSQYFIFLLSTRAGGLGLNLQAADTVVIFDSDWNPHQDLQAQDRAHRIGQQNEV 1169
Query: 1115 HIYRLISESTIEENILKKANQKRALDDLVIQSGGYN 1150
+ RL + +++EE IL A K +D VIQ+G ++
Sbjct: 1170 RVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFD 1205
Score = 88 (36.0 bits), Expect = 5.2e-98, Sum P(4) = 5.2e-98
Identities = 31/102 (30%), Positives = 52/102 (50%)
Query: 25 NISKDVKKFWMKIEKLVLYKHQMEVDVRKKKALD----KQLEFLLGQTERYSSMLAENLV 80
N ++ KK +IEK + + E + +K +D ++L +LL QT+ Y + L NLV
Sbjct: 486 NTEREQKKETERIEKERMRRLMAEDEEGYRKLIDQKKDRRLAYLLQQTDEYVANLT-NLV 544
Query: 81 DSHKPVQQSPMREQPGIQYKEADEN--GAEEP-GVQSKEADE 119
HK Q + +++ + K+A+EN G E G + DE
Sbjct: 545 WEHKQAQAAKEKKKRRRRKKKAEENAEGGESALGPDGEPIDE 586
Score = 54 (24.1 bits), Expect = 1.1e-97, Sum P(5) = 1.1e-97
Identities = 25/92 (27%), Positives = 41/92 (44%)
Query: 1442 TSESKAVKEEPSVEPMSIDDDFYDEDATFSDAMSPPSTSQKKRKKAELALYDDEEREXXX 1501
++ K KEE S + + +++ DE+ + S+A S K KK DD+ R+
Sbjct: 1501 SARQKIAKEEESEDESNEEEEEEDEEESESEAKSV-KVKIKLNKK------DDKGRDKGK 1553
Query: 1502 XXXXXXXXXXXPVRSP-DSDSKLS-RKRHDGS 1531
PV S DSD + R++ +GS
Sbjct: 1554 GKKRPNRGKAKPVVSDFDSDEEQDEREQSEGS 1585
Score = 50 (22.7 bits), Expect = 5.2e-98, Sum P(4) = 5.2e-98
Identities = 20/102 (19%), Positives = 45/102 (44%)
Query: 1154 FKKLDPMELFSGHRTLPMKTMQKEKAI--NNGNEVSLSNADVEAALKCVEDEADYMALKR 1211
FKK+ E H+ + ++K+ + +N +L + + ++ K
Sbjct: 1449 FKKIK--ERIRNHKYRSLGDLEKDVMLLCHNAQTFNLEGSQIYEDSIVLQSVFKSARQKI 1506
Query: 1212 AEQEEAVD--NQEFTEEAVGRPEDDELVIEDTVRTDEPTDQG 1251
A++EE+ D N+E EE E + ++ ++ ++ D+G
Sbjct: 1507 AKEEESEDESNEEEEEEDEEESESEAKSVKVKIKLNKKDDKG 1548
Score = 44 (20.5 bits), Expect = 1.2e-96, Sum P(5) = 1.2e-96
Identities = 8/33 (24%), Positives = 19/33 (57%)
Query: 1928 KDANLRFDLIQEAWLEDMDGGRLSCMDQDLSLE 1960
+D + L ++ WL ++ G L M++++ L+
Sbjct: 1312 RDVDYSDALTEKQWLRAIEDGNLEEMEEEVRLK 1344
Score = 40 (19.1 bits), Expect = 1.1e-97, Sum P(5) = 1.1e-97
Identities = 15/60 (25%), Positives = 27/60 (45%)
Query: 1190 NADVEAALKCVEDEADYMALKRAEQEEAVDNQEFTEEAVGRPEDDELVIEDTVRTDEPTD 1249
N D + + D+ +RA + ++++E EE P DDE + + R +E D
Sbjct: 1193 NVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEENEEEDEVP-DDETLNQMIARREEEFD 1251
Score = 38 (18.4 bits), Expect = 5.1e-96, Sum P(5) = 5.1e-96
Identities = 9/31 (29%), Positives = 15/31 (48%)
Query: 1743 KSTREPARRVKFTNLGQSSKLLSAALHDANS 1773
K +E R K+ +LG K + H+A +
Sbjct: 1450 KKIKERIRNHKYRSLGDLEKDVMLLCHNAQT 1480
Score = 38 (18.4 bits), Expect = 1.8e-92, Sum P(5) = 1.8e-92
Identities = 10/38 (26%), Positives = 18/38 (47%)
Query: 95 PGIQYKEADENGAEEPGVQSKEADEDDAEQHSGFEPQL 132
PG Y+ A + +EE +E DE++ E ++
Sbjct: 625 PG--YEVAPRSDSEESDSDYEEEDEEEESSRQETEEKI 660
>UNIPROTKB|E9PTG1 [details] [associations]
symbol:Smarca2 "Protein Smarca2" species:10116 "Rattus
norvegicus" [GO:0000790 "nuclear chromatin" evidence=IEA]
[GO:0001105 "RNA polymerase II transcription coactivator activity"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008285 "negative
regulation of cell proliferation" evidence=IEA] [GO:0016514
"SWI/SNF complex" evidence=IEA] [GO:0030308 "negative regulation of
cell growth" evidence=IEA] [GO:0035887 "aortic smooth muscle cell
differentiation" evidence=IEA] [GO:0044212 "transcription
regulatory region DNA binding" evidence=IEA] [GO:0045111
"intermediate filament cytoskeleton" evidence=IEA] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0071564 "npBAF complex" evidence=IEA] [GO:0071565 "nBAF
complex" evidence=IEA] [GO:0071778 "WINAC complex" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001487 InterPro:IPR001650
InterPro:IPR006576 InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271
Pfam:PF00439 Pfam:PF07533 Pfam:PF08880 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297 SMART:SM00490
SMART:SM00592 SMART:SM00951 RGD:1302988 GO:GO:0005524 GO:GO:0045892
GO:GO:0008285 GO:GO:0030308 GO:GO:0045944 GO:GO:0044212
GO:GO:0045111 GO:GO:0000790 GO:GO:0071564 GO:GO:0016514
GO:GO:0071565 GO:GO:0004386 GO:GO:0001105 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 GO:GO:0071778
GeneTree:ENSGT00550000074659 InterPro:IPR013999 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 SMART:SM00573 PROSITE:PS51204
OMA:PQEGMHQ GO:GO:0035887 IPI:IPI00464435
Ensembl:ENSRNOT00000016740 ArrayExpress:E9PTG1 Uniprot:E9PTG1
Length = 1597
Score = 648 (233.2 bits), Expect = 5.4e-98, Sum P(4) = 5.4e-98
Identities = 140/316 (44%), Positives = 198/316 (62%)
Query: 442 QVRTKFPFLLKFPLREYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTIAMLAHLACEK 501
+V + L+ L+ YQ GL+W+V++Y LNGILADEMGLGKTI TIA++ +L K
Sbjct: 718 RVEKQSALLINGTLKHYQLQGLEWMVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHK 777
Query: 502 GIWGPHLIVVPTSVMLNWETEFLKWCPAFKILTYFGS-AKERKFKRQGWLKPNSFHVCIT 560
+ GP+LI+VP S + NW EF KW P+ ++Y G+ A R Q L+ F+V +T
Sbjct: 778 RLNGPYLIIVPLSTLSNWTYEFDKWAPSVVKISYKGTPAMRRSLVPQ--LRSGKFNVLLT 835
Query: 561 TYRLIIQDSKVFKRKKWKYLILDEAHLIKNWKSQRWQTL-LNFNSKRRILLTGTPLQNDL 619
TY II+D + + +WKY+I+DE H +KN + Q L ++ + RRILLTGTPLQN L
Sbjct: 836 TYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRILLTGTPLQNKL 895
Query: 620 MELWSLMHFLMPHIFQSHQEFKDWFCNPISGMVEGQEKVNKE----VVDRLHNVLRPFIL 675
ELW+L++FL+P IF+S F+ WF P + M + +N+E ++ RLH VLRPF+L
Sbjct: 896 PELWALLNFLLPTIFKSCSTFEQWFNAPFA-MTGERVDLNEEETILIIRRLHKVLRPFLL 954
Query: 676 RRLKRDVEKQLPMKQEHVIYCRLSKRQRNLYEDFIASSE--TQATLASANFFG----MIS 729
RRLK++VE QLP K E+VI C +S Q+ LY A T + G +++
Sbjct: 955 RRLKKEVESQLPEKVEYVIKCDMSALQKILYRHMQAKGILLTDGSEKDKKGKGGAKTLMN 1014
Query: 730 VIMQLRKVCNHPDLFE 745
IMQLRK+CNHP +F+
Sbjct: 1015 TIMQLRKICNHPYMFQ 1030
Score = 392 (143.0 bits), Expect = 5.4e-98, Sum P(4) = 5.4e-98
Identities = 73/156 (46%), Positives = 109/156 (69%)
Query: 996 GKLQELAILLRKLKSDGHRALIFTQMTKMLDILEEFISLYGYTYMRLDGSTQPEERQTLM 1055
GK + L +L KL++ HR L+F QMT ++ I+E++ + + Y+RLDG+T+ E+R L+
Sbjct: 1057 GKFELLDRILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRLDGTTKSEDRAALL 1116
Query: 1056 QRFNT-NPKIFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQDRCHRIGQTREV 1114
++FN + F+F+LSTR+GG+G+NL ADTV+ +DSDWNP D QAQDR HRIGQ EV
Sbjct: 1117 KKFNEPGSQYFIFLLSTRAGGLGLNLQAADTVVIFDSDWNPHQDLQAQDRAHRIGQQNEV 1176
Query: 1115 HIYRLISESTIEENILKKANQKRALDDLVIQSGGYN 1150
+ RL + +++EE IL A K +D VIQ+G ++
Sbjct: 1177 RVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFD 1212
Score = 91 (37.1 bits), Expect = 5.4e-98, Sum P(4) = 5.4e-98
Identities = 31/107 (28%), Positives = 54/107 (50%)
Query: 25 NISKDVKKFWMKIEKLVLYKHQMEVDVRKKKALD----KQLEFLLGQTERYSSMLAENLV 80
N ++ KK +IEK + + E + +K +D ++L +LL QT+ Y + L NLV
Sbjct: 493 NTEREQKKETERIEKERMRRLMAEDEEGYRKLIDQKKDRRLAYLLQQTDEYVANLT-NLV 551
Query: 81 DSHKPVQQSPMREQPGIQYKEADENG-AEEPGVQSKEADEDDAEQHS 126
HK Q + +++ + K+A+EN EP + D++ Q S
Sbjct: 552 WEHKQAQAAKEKKKRRRRRKKAEENAEGGEPALGPDGEPIDESSQMS 598
Score = 47 (21.6 bits), Expect = 5.4e-98, Sum P(4) = 5.4e-98
Identities = 21/103 (20%), Positives = 43/103 (41%)
Query: 1154 FKKLDPMELFSGHRTLPMKTMQKEKAI--NNGNEVSLSNADV---EAALKCVEDEADYMA 1208
FKK+ E H+ + ++K+ + +N +L + + L+ V A
Sbjct: 1456 FKKIK--ERIRNHKYRSLGDLEKDVMLLCHNAQTFNLEGSQIYEDSIVLQSVFKSARQKI 1513
Query: 1209 LKRAEQEEAVDNQEFTEEAVGRPEDDELVIEDTVRTDEPTDQG 1251
K E EE N+E EE E + ++ ++ ++ ++G
Sbjct: 1514 AKEEESEEE-SNEEEEEEDEEESEAEAKSVKVKIKLNKKEEKG 1555
Score = 47 (21.6 bits), Expect = 3.0e-97, Sum P(5) = 3.0e-97
Identities = 14/47 (29%), Positives = 24/47 (51%)
Query: 1442 TSESKAVKEEPSVEPMSIDDDFYDEDATFSDAMSPPSTSQKKRKKAE 1488
++ K KEE S E + +++ DE+ + ++A S K KK E
Sbjct: 1508 SARQKIAKEEESEEESNEEEEEEDEEESEAEAKSV-KVKIKLNKKEE 1553
Score = 44 (20.5 bits), Expect = 6.2e-97, Sum P(5) = 6.2e-97
Identities = 8/33 (24%), Positives = 19/33 (57%)
Query: 1928 KDANLRFDLIQEAWLEDMDGGRLSCMDQDLSLE 1960
+D + L ++ WL ++ G L M++++ L+
Sbjct: 1319 RDVDYSDALTEKQWLRAIEDGNLEEMEEEVRLK 1351
Score = 41 (19.5 bits), Expect = 4.8e-92, Sum P(5) = 4.8e-92
Identities = 18/74 (24%), Positives = 31/74 (41%)
Query: 60 QLEFLLGQTERYSSMLAEN--LVDSHKPVQQSPMREQPGIQYKEADENGAEEPGVQSKEA 117
QL L Q Y MLA L ++ + Q R PG+Q ++ + ++ Q +
Sbjct: 178 QLHQLRAQILAYK-MLARGQPLPETLQLAVQGK-RTLPGMQQQQQQQQQQQQQQQQQQPQ 235
Query: 118 DEDDAEQHSGFEPQ 131
+Q + +PQ
Sbjct: 236 QPQQPQQQTQAQPQ 249
Score = 40 (19.1 bits), Expect = 3.0e-97, Sum P(5) = 3.0e-97
Identities = 15/60 (25%), Positives = 27/60 (45%)
Query: 1190 NADVEAALKCVEDEADYMALKRAEQEEAVDNQEFTEEAVGRPEDDELVIEDTVRTDEPTD 1249
N D + + D+ +RA + ++++E EE P DDE + + R +E D
Sbjct: 1200 NVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEENEEEDEVP-DDETLNQMIARREEEFD 1258
Score = 38 (18.4 bits), Expect = 2.6e-96, Sum P(5) = 2.6e-96
Identities = 9/31 (29%), Positives = 15/31 (48%)
Query: 1743 KSTREPARRVKFTNLGQSSKLLSAALHDANS 1773
K +E R K+ +LG K + H+A +
Sbjct: 1457 KKIKERIRNHKYRSLGDLEKDVMLLCHNAQT 1487
Score = 37 (18.1 bits), Expect = 1.3e-91, Sum P(5) = 1.3e-91
Identities = 12/37 (32%), Positives = 20/37 (54%)
Query: 95 PGIQYKEADENGAEEPGVQSKEADEDDAEQHSGFEPQ 131
PG Y+ A + +EE +S +ED+ E+ S E +
Sbjct: 632 PG--YEVAPRSDSEES--ESDYEEEDEEEESSRQETE 664
>MGI|MGI:99603 [details] [associations]
symbol:Smarca2 "SWI/SNF related, matrix associated, actin
dependent regulator of chromatin, subfamily a, member 2"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000790 "nuclear chromatin" evidence=ISO]
[GO:0001105 "RNA polymerase II transcription coactivator activity"
evidence=ISO] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0006325 "chromatin organization"
evidence=TAS] [GO:0006334 "nucleosome assembly" evidence=TAS]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0008285 "negative regulation of cell
proliferation" evidence=IMP] [GO:0016514 "SWI/SNF complex"
evidence=ISO;TAS] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016817 "hydrolase activity, acting on acid anhydrides"
evidence=IEA] [GO:0016818 "hydrolase activity, acting on acid
anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
[GO:0030308 "negative regulation of cell growth" evidence=ISO]
[GO:0035887 "aortic smooth muscle cell differentiation"
evidence=IMP] [GO:0044212 "transcription regulatory region DNA
binding" evidence=ISO] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0071564 "npBAF complex"
evidence=IDA] [GO:0071565 "nBAF complex" evidence=IDA] [GO:0071778
"WINAC complex" evidence=ISO] InterPro:IPR000330 InterPro:IPR001487
InterPro:IPR001650 InterPro:IPR006576 InterPro:IPR014978
Pfam:PF00176 Pfam:PF00271 Pfam:PF00439 Pfam:PF07533 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297 SMART:SM00490
SMART:SM00592 SMART:SM00951 MGI:MGI:99603 GO:GO:0005524
GO:GO:0045892 GO:GO:0008285 GO:GO:0007399 GO:GO:0030308
GO:GO:0045944 GO:GO:0044212 GO:GO:0045111 GO:GO:0000790
GO:GO:0071564 GO:GO:0016514 GO:GO:0071565 GO:GO:0004386
GO:GO:0001105 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0006334 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 GO:GO:0071778 KO:K11647
ChiTaRS:SMARCA2 InterPro:IPR013999 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 SMART:SM00573 PROSITE:PS51204
CTD:6595 HOGENOM:HOG000172363 HOVERGEN:HBG056636 GO:GO:0035887
EMBL:BC075641 IPI:IPI01018407 RefSeq:NP_035546.2 UniGene:Mm.313303
ProteinModelPortal:Q6DIC0 SMR:Q6DIC0 DIP:DIP-48888N STRING:Q6DIC0
PhosphoSite:Q6DIC0 PaxDb:Q6DIC0 PRIDE:Q6DIC0 GeneID:67155
KEGG:mmu:67155 UCSC:uc008hbn.1 InParanoid:Q6DIC0 OrthoDB:EOG418BMJ
NextBio:323746 Bgee:Q6DIC0 Genevestigator:Q6DIC0 Uniprot:Q6DIC0
Length = 1577
Score = 648 (233.2 bits), Expect = 6.1e-98, Sum P(4) = 6.1e-98
Identities = 140/316 (44%), Positives = 198/316 (62%)
Query: 442 QVRTKFPFLLKFPLREYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTIAMLAHLACEK 501
+V + L+ L+ YQ GL+W+V++Y LNGILADEMGLGKTI TIA++ +L K
Sbjct: 716 RVEKQSALLINGTLKHYQLQGLEWMVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHK 775
Query: 502 GIWGPHLIVVPTSVMLNWETEFLKWCPAFKILTYFGS-AKERKFKRQGWLKPNSFHVCIT 560
+ GP+LI+VP S + NW EF KW P+ ++Y G+ A R Q L+ F+V +T
Sbjct: 776 RLNGPYLIIVPLSTLSNWTYEFDKWAPSVVKISYKGTPAMRRSLVPQ--LRSGKFNVLLT 833
Query: 561 TYRLIIQDSKVFKRKKWKYLILDEAHLIKNWKSQRWQTL-LNFNSKRRILLTGTPLQNDL 619
TY II+D + + +WKY+I+DE H +KN + Q L ++ + RRILLTGTPLQN L
Sbjct: 834 TYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRILLTGTPLQNKL 893
Query: 620 MELWSLMHFLMPHIFQSHQEFKDWFCNPISGMVEGQEKVNKE----VVDRLHNVLRPFIL 675
ELW+L++FL+P IF+S F+ WF P + M + +N+E ++ RLH VLRPF+L
Sbjct: 894 PELWALLNFLLPTIFKSCSTFEQWFNAPFA-MTGERVDLNEEETILIIRRLHKVLRPFLL 952
Query: 676 RRLKRDVEKQLPMKQEHVIYCRLSKRQRNLYEDFIASSE--TQATLASANFFG----MIS 729
RRLK++VE QLP K E+VI C +S Q+ LY A T + G +++
Sbjct: 953 RRLKKEVESQLPEKVEYVIKCDMSALQKILYRHMQAKGILLTDGSEKDKKGKGGAKTLMN 1012
Query: 730 VIMQLRKVCNHPDLFE 745
IMQLRK+CNHP +F+
Sbjct: 1013 TIMQLRKICNHPYMFQ 1028
Score = 392 (143.0 bits), Expect = 6.1e-98, Sum P(4) = 6.1e-98
Identities = 73/156 (46%), Positives = 109/156 (69%)
Query: 996 GKLQELAILLRKLKSDGHRALIFTQMTKMLDILEEFISLYGYTYMRLDGSTQPEERQTLM 1055
GK + L +L KL++ HR L+F QMT ++ I+E++ + + Y+RLDG+T+ E+R L+
Sbjct: 1055 GKFELLDRILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRLDGTTKSEDRAALL 1114
Query: 1056 QRFNT-NPKIFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQDRCHRIGQTREV 1114
++FN + F+F+LSTR+GG+G+NL ADTV+ +DSDWNP D QAQDR HRIGQ EV
Sbjct: 1115 KKFNEPGSQYFIFLLSTRAGGLGLNLQAADTVVIFDSDWNPHQDLQAQDRAHRIGQQNEV 1174
Query: 1115 HIYRLISESTIEENILKKANQKRALDDLVIQSGGYN 1150
+ RL + +++EE IL A K +D VIQ+G ++
Sbjct: 1175 RVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFD 1210
Score = 91 (37.1 bits), Expect = 6.1e-98, Sum P(4) = 6.1e-98
Identities = 31/107 (28%), Positives = 54/107 (50%)
Query: 25 NISKDVKKFWMKIEKLVLYKHQMEVDVRKKKALD----KQLEFLLGQTERYSSMLAENLV 80
N ++ KK +IEK + + E + +K +D ++L +LL QT+ Y + L NLV
Sbjct: 491 NTEREQKKETERIEKERMRRLMAEDEEGYRKLIDQKKDRRLAYLLQQTDEYVANLT-NLV 549
Query: 81 DSHKPVQQSPMREQPGIQYKEADENG-AEEPGVQSKEADEDDAEQHS 126
HK Q + +++ + K+A+EN EP + D++ Q S
Sbjct: 550 WEHKQAQAAKEKKKRRRRKKKAEENAEGGEPALGPDGEPIDESSQMS 596
Score = 49 (22.3 bits), Expect = 1.6e-97, Sum P(5) = 1.6e-97
Identities = 15/47 (31%), Positives = 24/47 (51%)
Query: 1442 TSESKAVKEEPSVEPMSIDDDFYDEDATFSDAMSPPSTSQKKRKKAE 1488
++ K KEE S E + +++ DE+ + S+A S K KK E
Sbjct: 1488 SARQKIAKEEESEEESNEEEEEDDEEESESEAKSV-KVKIKLNKKEE 1533
Score = 46 (21.3 bits), Expect = 6.1e-98, Sum P(4) = 6.1e-98
Identities = 20/103 (19%), Positives = 43/103 (41%)
Query: 1154 FKKLDPMELFSGHRTLPMKTMQKEKAI--NNGNEVSLSNADV---EAALKCVEDEADYMA 1208
FKK+ E H+ + ++K+ + +N +L + + L+ V A
Sbjct: 1436 FKKIK--ERIRNHKYRSLGDLEKDVMLLCHNAQTFNLEGSQIYEDSIVLQSVFKSARQKI 1493
Query: 1209 LKRAEQEEAVDNQEFTEEAVGRPEDDELVIEDTVRTDEPTDQG 1251
K E EE N+E E+ E + ++ ++ ++ ++G
Sbjct: 1494 AKEEESEEE-SNEEEEEDDEEESESEAKSVKVKIKLNKKEEKG 1535
Score = 44 (20.5 bits), Expect = 5.4e-97, Sum P(5) = 5.4e-97
Identities = 8/33 (24%), Positives = 19/33 (57%)
Query: 1928 KDANLRFDLIQEAWLEDMDGGRLSCMDQDLSLE 1960
+D + L ++ WL ++ G L M++++ L+
Sbjct: 1317 RDVDYSDALTEKQWLRAIEDGNLEEMEEEVRLK 1349
Score = 40 (19.1 bits), Expect = 1.6e-97, Sum P(5) = 1.6e-97
Identities = 15/60 (25%), Positives = 27/60 (45%)
Query: 1190 NADVEAALKCVEDEADYMALKRAEQEEAVDNQEFTEEAVGRPEDDELVIEDTVRTDEPTD 1249
N D + + D+ +RA + ++++E EE P DDE + + R +E D
Sbjct: 1198 NVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEENEEEDEVP-DDETLNQMIARREEEFD 1256
Score = 38 (18.4 bits), Expect = 2.3e-96, Sum P(5) = 2.3e-96
Identities = 9/31 (29%), Positives = 15/31 (48%)
Query: 1743 KSTREPARRVKFTNLGQSSKLLSAALHDANS 1773
K +E R K+ +LG K + H+A +
Sbjct: 1437 KKIKERIRNHKYRSLGDLEKDVMLLCHNAQT 1467
Score = 37 (18.1 bits), Expect = 6.8e-92, Sum P(5) = 6.8e-92
Identities = 12/37 (32%), Positives = 20/37 (54%)
Query: 95 PGIQYKEADENGAEEPGVQSKEADEDDAEQHSGFEPQ 131
PG Y+ A + +EE +S +ED+ E+ S E +
Sbjct: 630 PG--YEVAPRSDSEES--ESDYEEEDEEEESSRQETE 662
>SGD|S000005816 [details] [associations]
symbol:SNF2 "Catalytic subunit of the SWI/SNF chromatin
remodeling complex" species:4932 "Saccharomyces cerevisiae"
[GO:0006261 "DNA-dependent DNA replication" evidence=IMP]
[GO:0016514 "SWI/SNF complex" evidence=IDA;IMP] [GO:0006338
"chromatin remodeling" evidence=IGI;IMP] [GO:0031496 "positive
regulation of mating type switching" evidence=IMP] [GO:0031492
"nucleosomal DNA binding" evidence=IDA] [GO:0042766 "nucleosome
mobilization" evidence=IMP;IDA] [GO:0006302 "double-strand break
repair" evidence=IMP] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA;IDA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IMP;IDA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IGI;IMP] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0016818 "hydrolase activity, acting on acid
anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
[GO:0043044 "ATP-dependent chromatin remodeling" evidence=IMP;IDA]
[GO:0044109 "cellular alcohol catabolic process" evidence=IMP]
[GO:0005987 "sucrose catabolic process" evidence=IMP] [GO:0070577
"histone acetyl-lysine binding" evidence=IMP;IDA] [GO:0042148
"strand invasion" evidence=IMP] [GO:0061412 "positive regulation of
transcription from RNA polymerase II promoter in response to amino
acid starvation" evidence=IMP] [GO:0001102 "RNA polymerase II
activating transcription factor binding" evidence=IPI]
InterPro:IPR000330 InterPro:IPR001487 InterPro:IPR001650
InterPro:IPR014978 InterPro:IPR017956 Pfam:PF00176 Pfam:PF00271
Pfam:PF00439 Pfam:PF08880 PRINTS:PR00503 PROSITE:PS50014
PROSITE:PS51194 SMART:SM00297 SMART:SM00384 SMART:SM00490
SMART:SM00951 SGD:S000005816 GO:GO:0005524 EMBL:BK006948
GO:GO:0006351 GO:GO:0006261 GO:GO:0016514 GO:GO:0006302
GO:GO:0004386 GO:GO:0005987 GO:GO:0042766 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0043044
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633 GO:GO:0070577
InterPro:IPR018359 GeneTree:ENSGT00550000074659 InterPro:IPR014012
PROSITE:PS51204 EMBL:X89633 GO:GO:0008094 HOGENOM:HOG000172362
GO:GO:0031492 RefSeq:NP_014933.3 GeneID:854465 KEGG:sce:YOR290C
KO:K11786 GO:GO:0061412 GO:GO:0042148 OrthoDB:EOG4D565R EMBL:M61703
EMBL:X57837 EMBL:D90459 EMBL:Z75198 EMBL:Z75199 PIR:S15047
RefSeq:NP_014935.3 ProteinModelPortal:P22082 SMR:P22082
DIP:DIP-1150N IntAct:P22082 MINT:MINT-600461 STRING:P22082
PaxDb:P22082 PeptideAtlas:P22082 EnsemblFungi:YOR290C GeneID:854467
KEGG:sce:YOR292C CYGD:YOR290c OMA:HPNFLSK NextBio:976750
Genevestigator:P22082 GermOnline:YOR290C GO:GO:0044109
GO:GO:0031496 Uniprot:P22082
Length = 1703
Score = 662 (238.1 bits), Expect = 7.8e-98, Sum P(2) = 7.8e-98
Identities = 132/302 (43%), Positives = 198/302 (65%)
Query: 455 LREYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTIAMLAHLACEKGIWGPHLIVVPTS 514
L++YQ GL W+V+++ LNGILADEMGLGKTI TI++L +L K I GP+L++VP S
Sbjct: 767 LKDYQIKGLQWMVSLFNNHLNGILADEMGLGKTIQTISLLTYLYEMKNIRGPYLVIVPLS 826
Query: 515 VMLNWETEFLKWCPAFKILTYFGSAKERKFKRQGWLKPNSFHVCITTYRLIIQDSKVFKR 574
+ NW +EF KW P + +++ GS ERK K Q ++ F V +TT+ II++ + +
Sbjct: 827 TLSNWSSEFAKWAPTLRTISFKGSPNERKAK-QAKIRAGEFDVVLTTFEYIIKERALLSK 885
Query: 575 KKWKYLILDEAHLIKNWKSQRWQTL-LNFNSKRRILLTGTPLQNDLMELWSLMHFLMPHI 633
KW ++I+DE H +KN +S+ TL ++++ R++LTGTPLQN+L ELW+L++F++P I
Sbjct: 886 VKWVHMIIDEGHRMKNAQSKLSLTLNTHYHADYRLILTGTPLQNNLPELWALLNFVLPKI 945
Query: 634 FQSHQEFKDWFCNPISGMVEGQEKV--NKE----VVDRLHNVLRPFILRRLKRDVEKQLP 687
F S + F +WF P + GQ+K+ ++E V+ RLH VLRPF+LRRLK+DVEK+LP
Sbjct: 946 FNSVKSFDEWFNTPFAN-TGGQDKIELSEEETLLVIRRLHKVLRPFLLRRLKKDVEKELP 1004
Query: 688 MKQEHVIYCRLSKRQRNLYEDFIASSET----QATLASANFFGMISVIMQLRKVCNHPDL 743
K E V+ C++S Q+ +Y+ + Q G + IMQL+K+CNHP +
Sbjct: 1005 DKVEKVVKCKMSALQQIMYQQMLKYRRLFIGDQNNKKMVGLRGFNNQIMQLKKICNHPFV 1064
Query: 744 FE 745
FE
Sbjct: 1065 FE 1066
Score = 411 (149.7 bits), Expect = 7.8e-98, Sum P(2) = 7.8e-98
Identities = 94/230 (40%), Positives = 141/230 (61%)
Query: 996 GKLQELAILLRKLKSDGHRALIFTQMTKMLDILEEFISLYGYTYMRLDGSTQPEERQTLM 1055
GK + L +L KLK+ GHR LIF QMT+++DI+E+F+ Y+RLDG T+ +ER L+
Sbjct: 1087 GKFELLDRILPKLKATGHRVLIFFQMTQIMDIMEDFLRYINIKYLRLDGHTKSDERSELL 1146
Query: 1056 QRFNTNPKIFL-FILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQDRCHRIGQTREV 1114
+ FN +L FILSTR+GG+G+NL ADTVI +D+DWNP D QAQDR HRIGQ EV
Sbjct: 1147 RLFNAPDSEYLCFILSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQKNEV 1206
Query: 1115 HIYRLISESTIEENILKKANQKRALDDLVIQSGGYNTEFFKKLDPMELFSGHRTLPMKTM 1174
I RLI+ +++EE IL++A +K +D VIQ+G +F K E + R+L
Sbjct: 1207 RILRLITTNSVEEVILERAYKKLDIDGKVIQAG----KFDNKSTSEEQEALLRSLLDAEE 1262
Query: 1175 QKEKAINNG--NEVSLSNADVEAALKCVEDEADYMALKRAEQEEAVDNQE 1222
++ K +G E L ++++ L ++ + L R +++ + +E
Sbjct: 1263 ERRKKRESGVEEEEELKDSEINEIL--ARNDEEMAVLTRMDEDRSKKEEE 1310
Score = 50 (22.7 bits), Expect = 8.9e-60, Sum P(2) = 8.9e-60
Identities = 19/91 (20%), Positives = 42/91 (46%)
Query: 1172 KTMQKEKAINNGNEVSLSNADVEAALKCVEDEADYMALKRAEQEEAVDNQEFTEEA--VG 1229
K K +AI+ E+ N D + + + + A RA+ + A+++ +F + G
Sbjct: 1390 KKEDKSEAIDGNGEIKGENIDADNDGPRINNIS---AEDRADTDLAMNDDDFLSKKRKAG 1446
Query: 1230 RPED--DELVIEDTVRTDEPTDQGGCMTANN 1258
RP ++ +E + ++ P + +T +N
Sbjct: 1447 RPRGRPKKVKLEGSENSEPPALESSPVTGDN 1477
Score = 42 (19.8 bits), Expect = 5.7e-32, Sum P(2) = 5.7e-32
Identities = 10/43 (23%), Positives = 20/43 (46%)
Query: 795 NSWESDELNAIATPASLIKERADLNNLEEVGPFCTHRKRLNGT 837
N+ +D ++ + A L + + ++ GP H + NGT
Sbjct: 331 NNTNTDNVSGLTRNAPLDSKDENFASVSPAGPSSVHNAK-NGT 372
Score = 40 (19.1 bits), Expect = 9.2e-32, Sum P(2) = 9.2e-32
Identities = 7/21 (33%), Positives = 14/21 (66%)
Query: 644 FCNPISGMVEGQEKVNKEVVD 664
F + ++ V+ Q+K KE++D
Sbjct: 689 FLDSLTRAVKDQQKYTKEMID 709
>UNIPROTKB|A5PKK5 [details] [associations]
symbol:SMARCA2 "SMARCA2 protein" species:9913 "Bos taurus"
[GO:0071778 "WINAC complex" evidence=IEA] [GO:0071565 "nBAF
complex" evidence=IEA] [GO:0071564 "npBAF complex" evidence=IEA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0045111 "intermediate filament cytoskeleton"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0035887 "aortic smooth muscle cell
differentiation" evidence=IEA] [GO:0030308 "negative regulation of
cell growth" evidence=IEA] [GO:0016514 "SWI/SNF complex"
evidence=IEA] [GO:0008285 "negative regulation of cell
proliferation" evidence=IEA] [GO:0001105 "RNA polymerase II
transcription coactivator activity" evidence=IEA] [GO:0000790
"nuclear chromatin" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001487 InterPro:IPR001650
InterPro:IPR006576 InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271
Pfam:PF00439 Pfam:PF07533 Pfam:PF08880 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297 SMART:SM00490
SMART:SM00592 SMART:SM00951 GO:GO:0005524 GO:GO:0045892
GO:GO:0008285 GO:GO:0030308 GO:GO:0045944 GO:GO:0044212
GO:GO:0045111 GO:GO:0000790 GO:GO:0071564 GO:GO:0016514
GO:GO:0071565 GO:GO:0004386 GO:GO:0001105 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359 GO:GO:0071778
KO:K11647 GeneTree:ENSGT00550000074659 InterPro:IPR013999
InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529 SMART:SM00573
PROSITE:PS51204 CTD:6595 HOGENOM:HOG000172363 HOVERGEN:HBG056636
OMA:PQEGMHQ GO:GO:0035887 OrthoDB:EOG418BMJ EMBL:DAAA02022747
EMBL:DAAA02022748 EMBL:DAAA02022749 EMBL:BC142521 IPI:IPI00854472
RefSeq:NP_001092585.1 UniGene:Bt.63204 SMR:A5PKK5 STRING:A5PKK5
Ensembl:ENSBTAT00000035681 GeneID:540904 KEGG:bta:540904
InParanoid:A5PKK5 NextBio:20878906 Uniprot:A5PKK5
Length = 1554
Score = 648 (233.2 bits), Expect = 1.1e-97, Sum P(4) = 1.1e-97
Identities = 140/316 (44%), Positives = 198/316 (62%)
Query: 442 QVRTKFPFLLKFPLREYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTIAMLAHLACEK 501
+V + L+ L+ YQ GL+W+V++Y LNGILADEMGLGKTI TIA++ +L K
Sbjct: 693 RVEKQSALLINGTLKHYQLQGLEWMVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHK 752
Query: 502 GIWGPHLIVVPTSVMLNWETEFLKWCPAFKILTYFGS-AKERKFKRQGWLKPNSFHVCIT 560
+ GP+LI+VP S + NW EF KW P+ ++Y G+ A R Q L+ F+V +T
Sbjct: 753 RLNGPYLIIVPLSTLSNWTYEFDKWAPSVVKISYKGTPAMRRSLVPQ--LRSGKFNVLLT 810
Query: 561 TYRLIIQDSKVFKRKKWKYLILDEAHLIKNWKSQRWQTL-LNFNSKRRILLTGTPLQNDL 619
TY II+D + + +WKY+I+DE H +KN + Q L ++ + RRILLTGTPLQN L
Sbjct: 811 TYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRILLTGTPLQNKL 870
Query: 620 MELWSLMHFLMPHIFQSHQEFKDWFCNPISGMVEGQEKVNKE----VVDRLHNVLRPFIL 675
ELW+L++FL+P IF+S F+ WF P + M + +N+E ++ RLH VLRPF+L
Sbjct: 871 PELWALLNFLLPTIFKSCSTFEQWFNAPFA-MTGERVDLNEEETILIIRRLHKVLRPFLL 929
Query: 676 RRLKRDVEKQLPMKQEHVIYCRLSKRQRNLYEDFIASSE--TQATLASANFFG----MIS 729
RRLK++VE QLP K E+VI C +S Q+ LY A T + G +++
Sbjct: 930 RRLKKEVESQLPEKVEYVIKCDMSALQKILYRHMQAKGILLTDGSEKDKKGKGGAKTLMN 989
Query: 730 VIMQLRKVCNHPDLFE 745
IMQLRK+CNHP +F+
Sbjct: 990 TIMQLRKICNHPYMFQ 1005
Score = 392 (143.0 bits), Expect = 1.1e-97, Sum P(4) = 1.1e-97
Identities = 73/156 (46%), Positives = 109/156 (69%)
Query: 996 GKLQELAILLRKLKSDGHRALIFTQMTKMLDILEEFISLYGYTYMRLDGSTQPEERQTLM 1055
GK + L +L KL++ HR L+F QMT ++ I+E++ + + Y+RLDG+T+ E+R L+
Sbjct: 1032 GKFELLDRILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRLDGTTKSEDRAALL 1091
Query: 1056 QRFNT-NPKIFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQDRCHRIGQTREV 1114
++FN + F+F+LSTR+GG+G+NL ADTV+ +DSDWNP D QAQDR HRIGQ EV
Sbjct: 1092 KKFNEPGSQYFIFLLSTRAGGLGLNLQAADTVVIFDSDWNPHQDLQAQDRAHRIGQQNEV 1151
Query: 1115 HIYRLISESTIEENILKKANQKRALDDLVIQSGGYN 1150
+ RL + +++EE IL A K +D VIQ+G ++
Sbjct: 1152 RVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFD 1187
Score = 88 (36.0 bits), Expect = 1.1e-97, Sum P(4) = 1.1e-97
Identities = 31/102 (30%), Positives = 52/102 (50%)
Query: 25 NISKDVKKFWMKIEKLVLYKHQMEVDVRKKKALD----KQLEFLLGQTERYSSMLAENLV 80
N ++ KK +IEK + + E + +K +D ++L +LL QT+ Y + L NLV
Sbjct: 468 NTEREQKKETERIEKERMRRLMAEDEEGYRKLIDQKKDRRLAYLLQQTDEYVANLT-NLV 526
Query: 81 DSHKPVQQSPMREQPGIQYKEADEN--GAEEP-GVQSKEADE 119
HK Q + +++ + K+A+EN G E G + DE
Sbjct: 527 WEHKQAQAAKEKKKRRRKKKKAEENAEGGESALGPDGEPIDE 568
Score = 46 (21.3 bits), Expect = 1.1e-97, Sum P(4) = 1.1e-97
Identities = 19/102 (18%), Positives = 45/102 (44%)
Query: 1154 FKKLDPMELFSGHRTLPMKTMQKEKAI--NNGNEVSLSNADVEAALKCVEDEADYMALKR 1211
FKK+ E H+ + ++K+ + +N +L + + ++ K
Sbjct: 1413 FKKIK--ERIRNHKYRSLGDLEKDVMLLCHNAQTFNLEGSQIYEDSIVLQSVFKSARQKI 1470
Query: 1212 AEQEEAVD--NQEFTEEAVGRPEDDELVIEDTVRTDEPTDQG 1251
A++EE+ D N+E EE E + ++ ++ ++ ++G
Sbjct: 1471 AKEEESEDESNEEEEEEDEEESESEAKSVKVKIKLNKKDEKG 1512
Score = 46 (21.3 bits), Expect = 5.8e-97, Sum P(5) = 5.8e-97
Identities = 14/47 (29%), Positives = 24/47 (51%)
Query: 1442 TSESKAVKEEPSVEPMSIDDDFYDEDATFSDAMSPPSTSQKKRKKAE 1488
++ K KEE S + + +++ DE+ + S+A S K KK E
Sbjct: 1465 SARQKIAKEEESEDESNEEEEEEDEEESESEAKSV-KVKIKLNKKDE 1510
Score = 44 (20.5 bits), Expect = 9.3e-97, Sum P(5) = 9.3e-97
Identities = 8/33 (24%), Positives = 19/33 (57%)
Query: 1928 KDANLRFDLIQEAWLEDMDGGRLSCMDQDLSLE 1960
+D + L ++ WL ++ G L M++++ L+
Sbjct: 1294 RDVDYSDALTEKQWLRAIEDGNLEEMEEEVRLK 1326
Score = 40 (19.1 bits), Expect = 5.8e-97, Sum P(5) = 5.8e-97
Identities = 15/60 (25%), Positives = 27/60 (45%)
Query: 1190 NADVEAALKCVEDEADYMALKRAEQEEAVDNQEFTEEAVGRPEDDELVIEDTVRTDEPTD 1249
N D + + D+ +RA + ++++E EE P DDE + + R +E D
Sbjct: 1175 NVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEENEEEDEVP-DDETLNQMIARREEEFD 1233
Score = 38 (18.4 bits), Expect = 3.9e-96, Sum P(5) = 3.9e-96
Identities = 9/31 (29%), Positives = 15/31 (48%)
Query: 1743 KSTREPARRVKFTNLGQSSKLLSAALHDANS 1773
K +E R K+ +LG K + H+A +
Sbjct: 1414 KKIKERIRNHKYRSLGDLEKDVMLLCHNAQT 1444
Score = 38 (18.4 bits), Expect = 9.3e-92, Sum P(5) = 9.3e-92
Identities = 10/38 (26%), Positives = 18/38 (47%)
Query: 95 PGIQYKEADENGAEEPGVQSKEADEDDAEQHSGFEPQL 132
PG Y+ A + +EE +E DE++ E ++
Sbjct: 607 PG--YEVAPRSDSEESDSDYEEEDEEEESSRQETEEKI 642
>RGD|1302988 [details] [associations]
symbol:Smarca2 "SWI/SNF related, matrix associated, actin
dependent regulator of chromatin, subfamily a, member 2"
species:10116 "Rattus norvegicus" [GO:0000790 "nuclear chromatin"
evidence=ISO] [GO:0001105 "RNA polymerase II transcription
coactivator activity" evidence=ISO] [GO:0005634 "nucleus"
evidence=ISO] [GO:0008285 "negative regulation of cell
proliferation" evidence=ISO] [GO:0016514 "SWI/SNF complex"
evidence=ISO] [GO:0030308 "negative regulation of cell growth"
evidence=ISO] [GO:0035887 "aortic smooth muscle cell
differentiation" evidence=ISO] [GO:0043231 "intracellular
membrane-bounded organelle" evidence=ISO] [GO:0044212
"transcription regulatory region DNA binding" evidence=ISO]
[GO:0045111 "intermediate filament cytoskeleton" evidence=ISO]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0071564 "npBAF complex" evidence=ISO] [GO:0071565 "nBAF
complex" evidence=ISO] [GO:0071778 "WINAC complex" evidence=ISO]
[GO:0005730 "nucleolus" evidence=ISO] InterPro:IPR000330
InterPro:IPR001487 InterPro:IPR001650 InterPro:IPR006576
InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271 Pfam:PF00439
Pfam:PF07533 Pfam:PF08880 PRINTS:PR00503 PROSITE:PS50014
PROSITE:PS51194 SMART:SM00297 SMART:SM00490 SMART:SM00592
SMART:SM00951 RGD:1302988 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0003677 GO:GO:0004386 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 KO:K11647 InterPro:IPR013999
InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529 SMART:SM00573
PROSITE:PS51204 CTD:6595 HOGENOM:HOG000172363 HOVERGEN:HBG056636
OrthoDB:EOG418BMJ IPI:IPI00464435 EMBL:AY643746
RefSeq:NP_001004446.1 UniGene:Rn.94939 ProteinModelPortal:Q6DUH4
SMR:Q6DUH4 STRING:Q6DUH4 GeneID:361745 KEGG:rno:361745
UCSC:RGD:1302988 InParanoid:Q6DUH4 NextBio:677480
Genevestigator:Q6DUH4 Uniprot:Q6DUH4
Length = 1597
Score = 644 (231.8 bits), Expect = 1.5e-97, Sum P(4) = 1.5e-97
Identities = 139/316 (43%), Positives = 197/316 (62%)
Query: 442 QVRTKFPFLLKFPLREYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTIAMLAHLACEK 501
+V + L+ L+ YQ GL+W+V++Y LNGILADEMG GKTI TIA++ +L K
Sbjct: 718 RVEKQSALLINGTLKHYQLQGLEWMVSLYNNNLNGILADEMGPGKTIQTIALITYLMEHK 777
Query: 502 GIWGPHLIVVPTSVMLNWETEFLKWCPAFKILTYFGS-AKERKFKRQGWLKPNSFHVCIT 560
G+ GP+LI+VP S + NW EF KW P+ ++Y G+ A R Q L+ F+ +T
Sbjct: 778 GLNGPYLIIVPLSTLSNWTYEFDKWAPSAVKISYKGTPAMRRSLVPQ--LRSGKFNALLT 835
Query: 561 TYRLIIQDSKVFKRKKWKYLILDEAHLIKNWKSQRWQTL-LNFNSKRRILLTGTPLQNDL 619
TY II+D + + +WKY+I+DE H +KN + Q L ++ + RRILLTGTPLQN L
Sbjct: 836 TYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRILLTGTPLQNKL 895
Query: 620 MELWSLMHFLMPHIFQSHQEFKDWFCNPISGMVEGQEKVNKE----VVDRLHNVLRPFIL 675
ELW+L++FL+P IF+S F+ WF P + M + +N+E ++ RLH VLRPF+L
Sbjct: 896 PELWALLNFLLPTIFKSCSTFEQWFNAPFA-MTGERVDLNEEETILIIRRLHKVLRPFLL 954
Query: 676 RRLKRDVEKQLPMKQEHVIYCRLSKRQRNLYEDFIASSE--TQATLASANFFG----MIS 729
RRLK++VE QLP K E+VI C +S Q+ LY A T + G +++
Sbjct: 955 RRLKKEVESQLPEKVEYVIKCDMSALQKILYRHMQAKGILLTDGSEKDKKGKGGAKTLMN 1014
Query: 730 VIMQLRKVCNHPDLFE 745
IMQLRK+CNHP +F+
Sbjct: 1015 TIMQLRKICNHPYMFQ 1030
Score = 392 (143.0 bits), Expect = 1.5e-97, Sum P(4) = 1.5e-97
Identities = 73/156 (46%), Positives = 109/156 (69%)
Query: 996 GKLQELAILLRKLKSDGHRALIFTQMTKMLDILEEFISLYGYTYMRLDGSTQPEERQTLM 1055
GK + L +L KL++ HR L+F QMT ++ I+E++ + + Y+RLDG+T+ E+R L+
Sbjct: 1057 GKFELLDRILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRLDGTTKSEDRAALL 1116
Query: 1056 QRFNT-NPKIFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQDRCHRIGQTREV 1114
++FN + F+F+LSTR+GG+G+NL ADTV+ +DSDWNP D QAQDR HRIGQ EV
Sbjct: 1117 KKFNEPGSQYFIFLLSTRAGGLGLNLQAADTVVIFDSDWNPHQDLQAQDRAHRIGQQNEV 1176
Query: 1115 HIYRLISESTIEENILKKANQKRALDDLVIQSGGYN 1150
+ RL + +++EE IL A K +D VIQ+G ++
Sbjct: 1177 RVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFD 1212
Score = 91 (37.1 bits), Expect = 1.5e-97, Sum P(4) = 1.5e-97
Identities = 31/107 (28%), Positives = 54/107 (50%)
Query: 25 NISKDVKKFWMKIEKLVLYKHQMEVDVRKKKALD----KQLEFLLGQTERYSSMLAENLV 80
N ++ KK +IEK + + E + +K +D ++L +LL QT+ Y + L NLV
Sbjct: 493 NTEREQKKETERIEKERMRRLMAEDEEGYRKLIDQKKDRRLAYLLQQTDEYVANLT-NLV 551
Query: 81 DSHKPVQQSPMREQPGIQYKEADENG-AEEPGVQSKEADEDDAEQHS 126
HK Q + +++ + K+A+EN EP + D++ Q S
Sbjct: 552 WEHKQAQAAKEKKKRRRRRKKAEENAEGGEPALGPDGEPIDESSQMS 598
Score = 47 (21.6 bits), Expect = 1.5e-97, Sum P(4) = 1.5e-97
Identities = 21/103 (20%), Positives = 43/103 (41%)
Query: 1154 FKKLDPMELFSGHRTLPMKTMQKEKAI--NNGNEVSLSNADV---EAALKCVEDEADYMA 1208
FKK+ E H+ + ++K+ + +N +L + + L+ V A
Sbjct: 1456 FKKIK--ERIRNHKYRSLGDLEKDVMLLCHNAQTFNLEGSQIYEDSIVLQSVFKSARQKI 1513
Query: 1209 LKRAEQEEAVDNQEFTEEAVGRPEDDELVIEDTVRTDEPTDQG 1251
K E EE N+E EE E + ++ ++ ++ ++G
Sbjct: 1514 AKEEESEEE-SNEEEEEEDEEESEAEAKSVKVKIKLNKKEEKG 1555
Score = 47 (21.6 bits), Expect = 8.4e-97, Sum P(5) = 8.4e-97
Identities = 14/47 (29%), Positives = 24/47 (51%)
Query: 1442 TSESKAVKEEPSVEPMSIDDDFYDEDATFSDAMSPPSTSQKKRKKAE 1488
++ K KEE S E + +++ DE+ + ++A S K KK E
Sbjct: 1508 SARQKIAKEEESEEESNEEEEEEDEEESEAEAKSV-KVKIKLNKKEE 1553
Score = 44 (20.5 bits), Expect = 1.7e-96, Sum P(5) = 1.7e-96
Identities = 8/33 (24%), Positives = 19/33 (57%)
Query: 1928 KDANLRFDLIQEAWLEDMDGGRLSCMDQDLSLE 1960
+D + L ++ WL ++ G L M++++ L+
Sbjct: 1319 RDVDYSDALTEKQWLRAIEDGNLEEMEEEVRLK 1351
Score = 44 (20.5 bits), Expect = 6.6e-92, Sum P(5) = 6.6e-92
Identities = 19/74 (25%), Positives = 31/74 (41%)
Query: 60 QLEFLLGQTERYSSMLAEN--LVDSHKPVQQSPMREQPGIQYKEADENGAEEPGVQSKEA 117
QL L Q Y MLA L ++ + Q R PGIQ ++ + ++ Q +
Sbjct: 178 QLHQLRAQILAYK-MLARGQPLPETLQLAVQGK-RTLPGIQQQQQQQQQQQQQQQQQQPQ 235
Query: 118 DEDDAEQHSGFEPQ 131
+Q + +PQ
Sbjct: 236 QPQQPQQQTQAQPQ 249
Score = 40 (19.1 bits), Expect = 8.4e-97, Sum P(5) = 8.4e-97
Identities = 15/60 (25%), Positives = 27/60 (45%)
Query: 1190 NADVEAALKCVEDEADYMALKRAEQEEAVDNQEFTEEAVGRPEDDELVIEDTVRTDEPTD 1249
N D + + D+ +RA + ++++E EE P DDE + + R +E D
Sbjct: 1200 NVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEENEEEDEVP-DDETLNQMIARREEEFD 1258
Score = 38 (18.4 bits), Expect = 7.3e-96, Sum P(5) = 7.3e-96
Identities = 9/31 (29%), Positives = 15/31 (48%)
Query: 1743 KSTREPARRVKFTNLGQSSKLLSAALHDANS 1773
K +E R K+ +LG K + H+A +
Sbjct: 1457 KKIKERIRNHKYRSLGDLEKDVMLLCHNAQT 1487
Score = 37 (18.1 bits), Expect = 3.5e-91, Sum P(5) = 3.5e-91
Identities = 12/37 (32%), Positives = 20/37 (54%)
Query: 95 PGIQYKEADENGAEEPGVQSKEADEDDAEQHSGFEPQ 131
PG Y+ A + +EE +S +ED+ E+ S E +
Sbjct: 632 PG--YEVAPRSDSEES--ESDYEEEDEEEESSRQETE 664
>POMBASE|SPCC1620.14c [details] [associations]
symbol:snf22 "ATP-dependent DNA helicase Snf22"
species:4896 "Schizosaccharomyces pombe" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEP] [GO:0000790 "nuclear chromatin" evidence=IC]
[GO:0000991 "core RNA polymerase II binding transcription factor
activity" evidence=ISO] [GO:0003677 "DNA binding" evidence=IC]
[GO:0004003 "ATP-dependent DNA helicase activity" evidence=ISM]
[GO:0005524 "ATP binding" evidence=IC] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005819 "spindle" evidence=IDA] [GO:0006338
"chromatin remodeling" evidence=IGI] [GO:0007131 "reciprocal
meiotic recombination" evidence=IMP] [GO:0010972 "negative
regulation of G2/M transition of mitotic cell cycle" evidence=IMP]
[GO:0016514 "SWI/SNF complex" evidence=IDA] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=ISS] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEP] [GO:1900389 "regulation of glucose import
by regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:1900400 "regulation of iron ion import by
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] InterPro:IPR000330 InterPro:IPR001487
InterPro:IPR001650 InterPro:IPR014978 InterPro:IPR017956
Pfam:PF00176 Pfam:PF00271 Pfam:PF00439 Pfam:PF08880 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297 SMART:SM00384
SMART:SM00490 SMART:SM00951 PomBase:SPCC1620.14c GO:GO:0005524
GO:GO:0005819 EMBL:CU329672 GenomeReviews:CU329672_GR GO:GO:0003677
GO:GO:0045944 GO:GO:0000122 GO:GO:0000790 GO:GO:0016514
GO:GO:0004003 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0043044 GO:GO:0000991 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359 GO:GO:0007131
InterPro:IPR014012 PROSITE:PS51204 GO:GO:0010972
HOGENOM:HOG000172362 KO:K11786 OrthoDB:EOG4D565R EMBL:AB162437
PIR:T41628 RefSeq:NP_588472.2 ProteinModelPortal:O94421
DIP:DIP-48377N STRING:O94421 PRIDE:O94421
EnsemblFungi:SPCC1620.14c.1 GeneID:2538881 KEGG:spo:SPCC1620.14c
NextBio:20800061 GO:GO:1900389 GO:GO:1900400 Uniprot:O94421
Length = 1680
Score = 667 (239.9 bits), Expect = 2.0e-97, Sum P(3) = 2.0e-97
Identities = 138/312 (44%), Positives = 198/312 (63%)
Query: 455 LREYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTIAMLAHLACEKGIWGPHLIVVPTS 514
L++YQ GL+W++++Y LNGILADEMGLGKTI TIA + +L +K GP LI+VP S
Sbjct: 869 LKDYQLKGLEWMLSLYNNNLNGILADEMGLGKTIQTIAFITYLIEKKNQQGPFLIIVPLS 928
Query: 515 VMLNWETEFLKWCPAFKILTYFGSAKERKFKRQGWLKPNSFHVCITTYRLIIQDSKVFKR 574
+ NW EF KW P+ K + Y G + RK Q ++ ++F+V +TT+ II+D + R
Sbjct: 929 TLTNWIMEFEKWAPSVKKIAYKGPPQLRK-TLQSQIRSSNFNVLLTTFEYIIKDRPLLSR 987
Query: 575 KKWKYLILDEAHLIKNWKSQRWQTLLNF-NSKRRILLTGTPLQNDLMELWSLMHFLMPHI 633
KW ++I+DE H IKN +S+ TL + +S+ R++LTGTPLQN+L ELW+L++F++P I
Sbjct: 988 IKWVHMIIDEGHRIKNTQSKLTSTLSTYYHSQYRLILTGTPLQNNLPELWALLNFVLPKI 1047
Query: 634 FQSHQEFKDWFCNPISGMVEGQEKV--NKE----VVDRLHNVLRPFILRRLKRDVEKQLP 687
F S + F +WF P + GQ+K+ N+E ++ RLH VLRPF+ RRLK+DVEK+LP
Sbjct: 1048 FNSIKSFDEWFNTPFAN-TGGQDKIGLNEEEALLIIKRLHKVLRPFLFRRLKKDVEKELP 1106
Query: 688 MKQEHVIYCRLSKRQRNLYEDFIASSE--TQATLASANFFGMISVIMQLRKVCNHPDLFE 745
K E VI C LS Q LY+ G+ + +MQL+K+CNHP +FE
Sbjct: 1107 DKVEKVIKCPLSGLQLKLYQQMKKHGMLFVDGEKGKTGIKGLQNTVMQLKKICNHPFIFE 1166
Query: 746 GRPIVSSFDMSG 757
+ + D SG
Sbjct: 1167 D--VERAIDPSG 1176
Score = 412 (150.1 bits), Expect = 2.0e-97, Sum P(3) = 2.0e-97
Identities = 81/159 (50%), Positives = 118/159 (74%)
Query: 996 GKLQELAILLRKLKSDGHRALIFTQMTKMLDILEEFISLYGYTYMRLDGSTQPEERQTLM 1055
GK + L +L KL GH+ L+F QMT+++ I+E+++ + Y+RLDGST+ ++R +L+
Sbjct: 1187 GKFELLDRILPKLFLTGHKTLMFFQMTQIMTIMEDYLRSKNWKYLRLDGSTKSDDRCSLL 1246
Query: 1056 QRFNTNPK--IFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQDRCHRIGQTRE 1113
+FN +PK +++F+LSTR+GG+G+NL ADTVI +D+DWNP D QAQDR HRIGQT+E
Sbjct: 1247 AQFN-DPKSDVYIFMLSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQTKE 1305
Query: 1114 VHIYRLISESTIEENILKKANQKRALDDLVIQSGGYNTE 1152
V I RLI+E +IEENIL +A K LD VIQ+G ++ +
Sbjct: 1306 VRILRLITEKSIEENILSRAQYKLDLDGKVIQAGKFDNK 1344
Score = 44 (20.5 bits), Expect = 2.0e-97, Sum P(3) = 2.0e-97
Identities = 14/35 (40%), Positives = 21/35 (60%)
Query: 55 KALDKQLEFLLGQTERYSSMLAENLVDSHKPVQQS 89
KA D ++ LL QT++Y ENL + + +QQS
Sbjct: 788 KAKDTRITHLLKQTDQY----LENLTRAVR-IQQS 817
Score = 44 (20.5 bits), Expect = 8.0e-59, Sum P(3) = 8.0e-59
Identities = 10/34 (29%), Positives = 20/34 (58%)
Query: 1109 GQTREVHIYRLISESTIEENILKKANQKRALDDL 1142
G+ ++ + LIS + E + KK +++RA D+
Sbjct: 1371 GELQDDELNELISRTDEELVLFKKLDKERAATDI 1404
Score = 37 (18.1 bits), Expect = 4.3e-58, Sum P(3) = 4.3e-58
Identities = 7/16 (43%), Positives = 10/16 (62%)
Query: 800 DELNAIATPASLIKER 815
DELN + P+S + R
Sbjct: 1462 DELNTVDDPSSTLMPR 1477
>ZFIN|ZDB-GENE-030605-1 [details] [associations]
symbol:smarca4 "SWI/SNF related, matrix associated,
actin dependent regulator of chromatin, subfamily a, member 4"
species:7955 "Danio rerio" [GO:0016817 "hydrolase activity, acting
on acid anhydrides" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0016818 "hydrolase activity, acting on acid anhydrides, in
phosphorus-containing anhydrides" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0031101 "fin regeneration" evidence=IMP] [GO:0003407 "neural
retina development" evidence=IMP] [GO:0007417 "central nervous
system development" evidence=IMP] [GO:0014032 "neural crest cell
development" evidence=IMP] [GO:0060059 "embryonic retina
morphogenesis in camera-type eye" evidence=IMP] [GO:0010842 "retina
layer formation" evidence=IMP] [GO:0021634 "optic nerve formation"
evidence=IMP] [GO:0030182 "neuron differentiation" evidence=IMP]
[GO:0060973 "cell migration involved in heart development"
evidence=IMP] [GO:0001947 "heart looping" evidence=IMP] [GO:0060038
"cardiac muscle cell proliferation" evidence=IMP] [GO:0048596
"embryonic camera-type eye morphogenesis" evidence=IMP] [GO:0000185
"activation of MAPKKK activity" evidence=IMP] InterPro:IPR000330
InterPro:IPR001487 InterPro:IPR001650 InterPro:IPR006576
InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271 Pfam:PF00439
Pfam:PF07533 Pfam:PF08880 PRINTS:PR00503 PROSITE:PS50014
PROSITE:PS51194 SMART:SM00297 SMART:SM00490 SMART:SM00592
SMART:SM00951 ZFIN:ZDB-GENE-030605-1 GO:GO:0005524 GO:GO:0005634
GO:GO:0006355 GO:GO:0030182 GO:GO:0003677 GO:GO:0007417
GO:GO:0004386 GO:GO:0001947 GO:GO:0010842 GO:GO:0014032
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 GO:GO:0031101 GO:GO:0060038 GO:GO:0048596
KO:K11647 GeneTree:ENSGT00550000074659 InterPro:IPR013999
InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529 SMART:SM00573
PROSITE:PS51204 GO:GO:0060059 GO:GO:0000185 HOGENOM:HOG000172363
HOVERGEN:HBG056636 CTD:6597 OMA:HKPMESM EMBL:BX322663 EMBL:BC163918
EMBL:BC163920 EMBL:AY205256 EMBL:AY218841 IPI:IPI00493397
RefSeq:NP_853634.1 UniGene:Dr.2414 SMR:Q7ZSY3 STRING:Q7ZSY3
Ensembl:ENSDART00000115110 Ensembl:ENSDART00000134514 GeneID:353295
KEGG:dre:353295 InParanoid:Q7ZSY3 NextBio:20812727 GO:GO:0060973
GO:GO:0021634 Uniprot:Q7ZSY3
Length = 1627
Score = 654 (235.3 bits), Expect = 3.0e-97, Sum P(3) = 3.0e-97
Identities = 144/318 (45%), Positives = 200/318 (62%)
Query: 440 TTQVRTKFPFLLKFPLREYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTIAMLAHLAC 499
T +V + L+ L++YQ GL+WLV++Y LNGILADEMGLGKTI TIA++ +L
Sbjct: 751 TEKVEKQSSLLVNGQLKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIALITYLME 810
Query: 500 EKGIWGPHLIVVPTSVMLNWETEFLKWCPAFKILTYFGS-AKERKFKRQGWLKPNSFHVC 558
K + GP LI+VP S + NW EF KW P+ ++Y GS A R F L+ F+V
Sbjct: 811 FKRLNGPFLIIVPLSTLSNWVYEFDKWAPSVVKVSYKGSPAARRAFLPI--LRSGKFNVL 868
Query: 559 ITTYRLIIQDSKVFKRKKWKYLILDEAHLIKNWKSQRWQTL-LNFNSKRRILLTGTPLQN 617
+TTY II+D +V + +WKY+I+DE H +KN + Q L ++ + RR+LLTGTPLQN
Sbjct: 869 VTTYEYIIKDKQVLAKLRWKYMIVDEGHRMKNHHCKLTQVLNTHYLAPRRVLLTGTPLQN 928
Query: 618 DLMELWSLMHFLMPHIFQSHQEFKDWFCNPISGMVEGQEKVNKE----VVDRLHNVLRPF 673
L ELW+L++FL+P IF+S F+ WF P + M + +N+E ++ RLH VLRPF
Sbjct: 929 KLPELWALLNFLLPTIFKSCSTFEQWFNAPFA-MTGEKVDLNEEETILIIRRLHKVLRPF 987
Query: 674 ILRRLKRDVEKQLPMKQEHVIYCRLSKRQRNLYEDFIASSE--TQATLASANFFG----M 727
+LRRLK++VE QLP K E+VI C +S QR LY A T + G +
Sbjct: 988 LLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVLLTDGSEKDKKGKGGTKTL 1047
Query: 728 ISVIMQLRKVCNHPDLFE 745
++ IMQLRK+CNHP +F+
Sbjct: 1048 MNTIMQLRKICNHPYMFQ 1065
Score = 385 (140.6 bits), Expect = 3.0e-97, Sum P(3) = 3.0e-97
Identities = 92/258 (35%), Positives = 146/258 (56%)
Query: 996 GKLQELAILLRKLKSDGHRALIFTQMTKMLDILEEFISLYGYTYMRLDGSTQPEERQTLM 1055
GK + L +L KL++ H+ L+F QMT ++ I+E++ + + Y+RLDG+T+ E+R L+
Sbjct: 1092 GKFELLDRILPKLRATNHKVLLFCQMTTLMTIMEDYFAYRNFKYLRLDGTTKAEDRGMLL 1151
Query: 1056 QRFNT-NPKIFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQDRCHRIGQTREV 1114
+ FN + + F+F+LSTR+GG+G+NL ADTVI +DSDWNP D QAQDR HRIGQ EV
Sbjct: 1152 KNFNDPSHQYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEV 1211
Query: 1115 HIYRLISESTIEENILKKANQKRALDDLVIQSGGYNTEFFKKLDPMELFSGHRTLPMKTM 1174
+ RL + +++EE IL A K +D VIQ+G ++ +K E R +
Sbjct: 1212 RVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFD----QKSSSHE----RRAFLQAIL 1263
Query: 1175 QKEKAINNGNEVSLSNADVEAALKCVEDEAD-YMALKRAEQEEAVDNQEFTEEAVGRPED 1233
+ E+ +EV + V + E+E D +M + + E N + + E+
Sbjct: 1264 EHEEQDEEEDEVP-DDETVNQMIARSEEEFDHFMRMDLDRRREEARNPKRRPRLM---EE 1319
Query: 1234 DEL---VIEDTVRTDEPT 1248
DEL +++D + T
Sbjct: 1320 DELPTWIMKDDAEVERLT 1337
Score = 82 (33.9 bits), Expect = 3.0e-97, Sum P(3) = 3.0e-97
Identities = 31/100 (31%), Positives = 49/100 (49%)
Query: 25 NISKDVKKFWMKIEKLVLYKHQMEVDVRKKKALD----KQLEFLLGQTERYSSMLAENLV 80
N ++ KK +IEK + + E + +K +D K+L +LL QT+ Y + L E LV
Sbjct: 528 NTEREQKKENERIEKERMRRLMAEDEEGYRKLIDQKKDKRLAYLLQQTDEYVANLTE-LV 586
Query: 81 DSHKPVQQSPMREQPGIQYK-EADENGAEEPGVQSKEADE 119
+HK Q +++ + K E E GA G + DE
Sbjct: 587 RAHKAAQALKDKKKKKKKKKPENAEGGAPALGPDGEPLDE 626
Score = 44 (20.5 bits), Expect = 2.9e-93, Sum P(3) = 2.9e-93
Identities = 13/45 (28%), Positives = 23/45 (51%)
Query: 80 VDSHKPVQQSPMREQ-PGIQYKEADENGAEEPGVQSKEADEDDAE 123
+D+ K Q E PG Y+ A + +E+ G +E DE++ +
Sbjct: 649 MDAPKAGQLDTWLEMNPG--YEVAPRSDSEDSGSDEEEDDEEEPQ 691
Score = 44 (20.5 bits), Expect = 1.8e-61, Sum P(3) = 1.8e-61
Identities = 16/60 (26%), Positives = 28/60 (46%)
Query: 1190 NADVEAALKCVEDEADYMALKRAEQEEAVDNQEFTEEAVGRPEDDELVIEDTVRTDEPTD 1249
N D + + D+ +RA + ++++E EE P DDE V + R++E D
Sbjct: 1235 NVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEQDEEEDEVP-DDETVNQMIARSEEEFD 1293
>UNIPROTKB|D4A4J2 [details] [associations]
symbol:Smarca2 "Protein Smarca2" species:10116 "Rattus
norvegicus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR006576
InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271 Pfam:PF07533
Pfam:PF08880 PROSITE:PS51194 SMART:SM00490 SMART:SM00592
SMART:SM00951 RGD:1302988 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0003677 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR013999 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 SMART:SM00573 PROSITE:PS51204
IPI:IPI00777186 Ensembl:ENSRNOT00000016283 ArrayExpress:D4A4J2
Uniprot:D4A4J2
Length = 1506
Score = 648 (233.2 bits), Expect = 3.2e-97, Sum P(5) = 3.2e-97
Identities = 140/316 (44%), Positives = 198/316 (62%)
Query: 442 QVRTKFPFLLKFPLREYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTIAMLAHLACEK 501
+V + L+ L+ YQ GL+W+V++Y LNGILADEMGLGKTI TIA++ +L K
Sbjct: 718 RVEKQSALLINGTLKHYQLQGLEWMVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHK 777
Query: 502 GIWGPHLIVVPTSVMLNWETEFLKWCPAFKILTYFGS-AKERKFKRQGWLKPNSFHVCIT 560
+ GP+LI+VP S + NW EF KW P+ ++Y G+ A R Q L+ F+V +T
Sbjct: 778 RLNGPYLIIVPLSTLSNWTYEFDKWAPSVVKISYKGTPAMRRSLVPQ--LRSGKFNVLLT 835
Query: 561 TYRLIIQDSKVFKRKKWKYLILDEAHLIKNWKSQRWQTL-LNFNSKRRILLTGTPLQNDL 619
TY II+D + + +WKY+I+DE H +KN + Q L ++ + RRILLTGTPLQN L
Sbjct: 836 TYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRILLTGTPLQNKL 895
Query: 620 MELWSLMHFLMPHIFQSHQEFKDWFCNPISGMVEGQEKVNKE----VVDRLHNVLRPFIL 675
ELW+L++FL+P IF+S F+ WF P + M + +N+E ++ RLH VLRPF+L
Sbjct: 896 PELWALLNFLLPTIFKSCSTFEQWFNAPFA-MTGERVDLNEEETILIIRRLHKVLRPFLL 954
Query: 676 RRLKRDVEKQLPMKQEHVIYCRLSKRQRNLYEDFIASSE--TQATLASANFFG----MIS 729
RRLK++VE QLP K E+VI C +S Q+ LY A T + G +++
Sbjct: 955 RRLKKEVESQLPEKVEYVIKCDMSALQKILYRHMQAKGILLTDGSEKDKKGKGGAKTLMN 1014
Query: 730 VIMQLRKVCNHPDLFE 745
IMQLRK+CNHP +F+
Sbjct: 1015 TIMQLRKICNHPYMFQ 1030
Score = 392 (143.0 bits), Expect = 3.2e-97, Sum P(5) = 3.2e-97
Identities = 73/156 (46%), Positives = 109/156 (69%)
Query: 996 GKLQELAILLRKLKSDGHRALIFTQMTKMLDILEEFISLYGYTYMRLDGSTQPEERQTLM 1055
GK + L +L KL++ HR L+F QMT ++ I+E++ + + Y+RLDG+T+ E+R L+
Sbjct: 1057 GKFELLDRILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRLDGTTKSEDRAALL 1116
Query: 1056 QRFNT-NPKIFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQDRCHRIGQTREV 1114
++FN + F+F+LSTR+GG+G+NL ADTV+ +DSDWNP D QAQDR HRIGQ EV
Sbjct: 1117 KKFNEPGSQYFIFLLSTRAGGLGLNLQAADTVVIFDSDWNPHQDLQAQDRAHRIGQQNEV 1176
Query: 1115 HIYRLISESTIEENILKKANQKRALDDLVIQSGGYN 1150
+ RL + +++EE IL A K +D VIQ+G ++
Sbjct: 1177 RVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFD 1212
Score = 91 (37.1 bits), Expect = 3.2e-97, Sum P(5) = 3.2e-97
Identities = 31/107 (28%), Positives = 54/107 (50%)
Query: 25 NISKDVKKFWMKIEKLVLYKHQMEVDVRKKKALD----KQLEFLLGQTERYSSMLAENLV 80
N ++ KK +IEK + + E + +K +D ++L +LL QT+ Y + L NLV
Sbjct: 493 NTEREQKKETERIEKERMRRLMAEDEEGYRKLIDQKKDRRLAYLLQQTDEYVANLT-NLV 551
Query: 81 DSHKPVQQSPMREQPGIQYKEADENG-AEEPGVQSKEADEDDAEQHS 126
HK Q + +++ + K+A+EN EP + D++ Q S
Sbjct: 552 WEHKQAQAAKEKKKRRRRRKKAEENAEGGEPALGPDGEPIDESSQMS 598
Score = 44 (20.5 bits), Expect = 3.2e-97, Sum P(5) = 3.2e-97
Identities = 8/33 (24%), Positives = 19/33 (57%)
Query: 1928 KDANLRFDLIQEAWLEDMDGGRLSCMDQDLSLE 1960
+D + L ++ WL ++ G L M++++ L+
Sbjct: 1319 RDVDYSDALTEKQWLRAIEDGNLEEMEEEVRLK 1351
Score = 42 (19.8 bits), Expect = 8.8e-62, Sum P(3) = 8.8e-62
Identities = 11/37 (29%), Positives = 18/37 (48%)
Query: 865 WNSLRCQKKPVYSTSLRELLTVKHPVCDILQQKTVRR 901
W R K P+ S+ +L K P +++K +RR
Sbjct: 1455 WKDPRSTKTPLSSSQCLRVLGRKLPKKKRVRRKAMRR 1491
Score = 41 (19.5 bits), Expect = 5.1e-92, Sum P(5) = 5.1e-92
Identities = 18/74 (24%), Positives = 31/74 (41%)
Query: 60 QLEFLLGQTERYSSMLAEN--LVDSHKPVQQSPMREQPGIQYKEADENGAEEPGVQSKEA 117
QL L Q Y MLA L ++ + Q R PG+Q ++ + ++ Q +
Sbjct: 178 QLHQLRAQILAYK-MLARGQPLPETLQLAVQGK-RTLPGMQQQQQQQQQQQQQQQQQQPQ 235
Query: 118 DEDDAEQHSGFEPQ 131
+Q + +PQ
Sbjct: 236 QPQQPQQQTQAQPQ 249
Score = 40 (19.1 bits), Expect = 3.2e-97, Sum P(5) = 3.2e-97
Identities = 15/60 (25%), Positives = 27/60 (45%)
Query: 1190 NADVEAALKCVEDEADYMALKRAEQEEAVDNQEFTEEAVGRPEDDELVIEDTVRTDEPTD 1249
N D + + D+ +RA + ++++E EE P DDE + + R +E D
Sbjct: 1200 NVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEENEEEDEVP-DDETLNQMIARREEEFD 1258
Score = 37 (18.1 bits), Expect = 1.3e-91, Sum P(5) = 1.3e-91
Identities = 12/37 (32%), Positives = 20/37 (54%)
Query: 95 PGIQYKEADENGAEEPGVQSKEADEDDAEQHSGFEPQ 131
PG Y+ A + +EE +S +ED+ E+ S E +
Sbjct: 632 PG--YEVAPRSDSEES--ESDYEEEDEEEESSRQETE 664
>UNIPROTKB|E2RKP4 [details] [associations]
symbol:SMARCA2 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0071778 "WINAC complex" evidence=IEA]
[GO:0071565 "nBAF complex" evidence=IEA] [GO:0071564 "npBAF
complex" evidence=IEA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0045111
"intermediate filament cytoskeleton" evidence=IEA] [GO:0044212
"transcription regulatory region DNA binding" evidence=IEA]
[GO:0035887 "aortic smooth muscle cell differentiation"
evidence=IEA] [GO:0030308 "negative regulation of cell growth"
evidence=IEA] [GO:0016514 "SWI/SNF complex" evidence=IEA]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IEA] [GO:0001105 "RNA polymerase II transcription
coactivator activity" evidence=IEA] [GO:0000790 "nuclear chromatin"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] InterPro:IPR000330
InterPro:IPR001487 InterPro:IPR001650 InterPro:IPR006576
InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271 Pfam:PF00439
Pfam:PF07533 Pfam:PF08880 PRINTS:PR00503 PROSITE:PS50014
PROSITE:PS51194 SMART:SM00297 SMART:SM00490 SMART:SM00592
SMART:SM00951 GO:GO:0005524 GO:GO:0045892 GO:GO:0008285
GO:GO:0030308 GO:GO:0045944 GO:GO:0044212 GO:GO:0045111
GO:GO:0000790 GO:GO:0071564 GO:GO:0016514 GO:GO:0071565
GO:GO:0004386 GO:GO:0001105 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 GO:GO:0071778 GeneTree:ENSGT00550000074659
InterPro:IPR013999 InterPro:IPR014012 InterPro:IPR006562
Pfam:PF07529 SMART:SM00573 PROSITE:PS51204 GO:GO:0035887
EMBL:AAEX03000600 Ensembl:ENSCAFT00000003206 NextBio:20852013
Uniprot:E2RKP4
Length = 1556
Score = 648 (233.2 bits), Expect = 4.7e-97, Sum P(4) = 4.7e-97
Identities = 140/316 (44%), Positives = 198/316 (62%)
Query: 442 QVRTKFPFLLKFPLREYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTIAMLAHLACEK 501
+V + L+ L+ YQ GL+W+V++Y LNGILADEMGLGKTI TIA++ +L K
Sbjct: 695 RVEKQSALLINGTLKHYQLQGLEWMVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHK 754
Query: 502 GIWGPHLIVVPTSVMLNWETEFLKWCPAFKILTYFGS-AKERKFKRQGWLKPNSFHVCIT 560
+ GP+LI+VP S + NW EF KW P+ ++Y G+ A R Q L+ F+V +T
Sbjct: 755 RLNGPYLIIVPLSTLSNWTYEFDKWAPSVVKISYKGTPAMRRSLVPQ--LRSGKFNVLLT 812
Query: 561 TYRLIIQDSKVFKRKKWKYLILDEAHLIKNWKSQRWQTL-LNFNSKRRILLTGTPLQNDL 619
TY II+D + + +WKY+I+DE H +KN + Q L ++ + RRILLTGTPLQN L
Sbjct: 813 TYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRILLTGTPLQNKL 872
Query: 620 MELWSLMHFLMPHIFQSHQEFKDWFCNPISGMVEGQEKVNKE----VVDRLHNVLRPFIL 675
ELW+L++FL+P IF+S F+ WF P + M + +N+E ++ RLH VLRPF+L
Sbjct: 873 PELWALLNFLLPTIFKSCSTFEQWFNAPFA-MTGERVDLNEEETILIIRRLHKVLRPFLL 931
Query: 676 RRLKRDVEKQLPMKQEHVIYCRLSKRQRNLYEDFIASSE--TQATLASANFFG----MIS 729
RRLK++VE QLP K E+VI C +S Q+ LY A T + G +++
Sbjct: 932 RRLKKEVESQLPEKVEYVIKCDMSALQKILYRHMQAKGILLTDGSEKDKKGKGGAKTLMN 991
Query: 730 VIMQLRKVCNHPDLFE 745
IMQLRK+CNHP +F+
Sbjct: 992 TIMQLRKICNHPYMFQ 1007
Score = 392 (143.0 bits), Expect = 4.7e-97, Sum P(4) = 4.7e-97
Identities = 73/156 (46%), Positives = 109/156 (69%)
Query: 996 GKLQELAILLRKLKSDGHRALIFTQMTKMLDILEEFISLYGYTYMRLDGSTQPEERQTLM 1055
GK + L +L KL++ HR L+F QMT ++ I+E++ + + Y+RLDG+T+ E+R L+
Sbjct: 1034 GKFELLDRILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRLDGTTKSEDRAALL 1093
Query: 1056 QRFNT-NPKIFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQDRCHRIGQTREV 1114
++FN + F+F+LSTR+GG+G+NL ADTV+ +DSDWNP D QAQDR HRIGQ EV
Sbjct: 1094 KKFNEPGSQYFIFLLSTRAGGLGLNLQAADTVVIFDSDWNPHQDLQAQDRAHRIGQQNEV 1153
Query: 1115 HIYRLISESTIEENILKKANQKRALDDLVIQSGGYN 1150
+ RL + +++EE IL A K +D VIQ+G ++
Sbjct: 1154 RVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFD 1189
Score = 82 (33.9 bits), Expect = 4.7e-97, Sum P(4) = 4.7e-97
Identities = 30/102 (29%), Positives = 51/102 (50%)
Query: 25 NISKDVKKFWMKIEKLVLYKHQMEVDVRKKKALD----KQLEFLLGQTERYSSMLAENLV 80
N ++ KK +IEK + + E + +K +D ++L +LL QT+ Y + L NLV
Sbjct: 470 NTEREQKKETERIEKERMRRLMAEDEEGYRKLIDQKKDRRLAYLLQQTDEYVANLT-NLV 528
Query: 81 DSHKPVQQSPMREQPGIQYKEADE--NGAEEP-GVQSKEADE 119
HK Q + +++ + K+A+E G E G + DE
Sbjct: 529 WEHKQAQAAKEKKKRRRRKKKAEEIAEGGESALGPDGEPIDE 570
Score = 46 (21.3 bits), Expect = 4.7e-97, Sum P(4) = 4.7e-97
Identities = 19/102 (18%), Positives = 45/102 (44%)
Query: 1154 FKKLDPMELFSGHRTLPMKTMQKEKAI--NNGNEVSLSNADVEAALKCVEDEADYMALKR 1211
FKK+ E H+ + ++K+ + +N +L + + ++ K
Sbjct: 1415 FKKIK--ERIRNHKYRSLGDLEKDVMLLCHNAQTFNLEGSQIYEDSIVLQSVFKSARQKI 1472
Query: 1212 AEQEEAVD--NQEFTEEAVGRPEDDELVIEDTVRTDEPTDQG 1251
A++EE+ D N+E EE E + ++ ++ ++ ++G
Sbjct: 1473 AKEEESEDESNEEEEEEDEEESESEAKSVKVKIKLNKKDEKG 1514
Score = 46 (21.3 bits), Expect = 2.5e-96, Sum P(5) = 2.5e-96
Identities = 14/47 (29%), Positives = 24/47 (51%)
Query: 1442 TSESKAVKEEPSVEPMSIDDDFYDEDATFSDAMSPPSTSQKKRKKAE 1488
++ K KEE S + + +++ DE+ + S+A S K KK E
Sbjct: 1467 SARQKIAKEEESEDESNEEEEEEDEEESESEAKSV-KVKIKLNKKDE 1512
Score = 44 (20.5 bits), Expect = 4.0e-96, Sum P(5) = 4.0e-96
Identities = 8/33 (24%), Positives = 19/33 (57%)
Query: 1928 KDANLRFDLIQEAWLEDMDGGRLSCMDQDLSLE 1960
+D + L ++ WL ++ G L M++++ L+
Sbjct: 1296 RDVDYSDALTEKQWLRAIEDGNLEEMEEEVRLK 1328
Score = 40 (19.1 bits), Expect = 2.5e-96, Sum P(5) = 2.5e-96
Identities = 15/60 (25%), Positives = 27/60 (45%)
Query: 1190 NADVEAALKCVEDEADYMALKRAEQEEAVDNQEFTEEAVGRPEDDELVIEDTVRTDEPTD 1249
N D + + D+ +RA + ++++E EE P DDE + + R +E D
Sbjct: 1177 NVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEENEEEDEVP-DDETLNQMIARREEEFD 1235
Score = 39 (18.8 bits), Expect = 7.4e-92, Sum P(5) = 7.4e-92
Identities = 10/38 (26%), Positives = 18/38 (47%)
Query: 95 PGIQYKEADENGAEEPGVQSKEADEDDAEQHSGFEPQL 132
PG Y+ A + +EE +E DE++ E ++
Sbjct: 609 PG--YEVAPRSDSEESDSDYEEEDEEEESSRQDTEEKI 644
Score = 38 (18.4 bits), Expect = 1.7e-95, Sum P(5) = 1.7e-95
Identities = 9/31 (29%), Positives = 15/31 (48%)
Query: 1743 KSTREPARRVKFTNLGQSSKLLSAALHDANS 1773
K +E R K+ +LG K + H+A +
Sbjct: 1416 KKIKERIRNHKYRSLGDLEKDVMLLCHNAQT 1446
>DICTYBASE|DDB_G0271052 [details] [associations]
symbol:snf2b "SNF2-related protein Snf2a"
species:44689 "Dictyostelium discoideum" [GO:0016818 "hydrolase
activity, acting on acid anhydrides, in phosphorus-containing
anhydrides" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA;ISS] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0005654 "nucleoplasm" evidence=ISS]
InterPro:IPR000330 InterPro:IPR001487 InterPro:IPR001650
InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297 SMART:SM00490
SMART:SM00951 dictyBase:DDB_G0271052 GO:GO:0005524 GO:GO:0005654
EMBL:AAFI02000005 GO:GO:0003677 GO:GO:0006357 GO:GO:0004386
InterPro:IPR011050 SUPFAM:SSF51126 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 SUPFAM:SSF47370
KO:K11647 InterPro:IPR014012 PROSITE:PS51204 RefSeq:XP_646649.1
ProteinModelPortal:Q55C32 EnsemblProtists:DDB0220695 GeneID:8617621
KEGG:ddi:DDB_G0271052 InParanoid:Q55C32 OMA:NINDNPN Uniprot:Q55C32
Length = 3247
Score = 651 (234.2 bits), Expect = 5.2e-97, Sum P(5) = 5.2e-97
Identities = 138/310 (44%), Positives = 196/310 (63%)
Query: 448 PFLLKF-PLREYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTIAMLAHLACEKGIWGP 506
P LL+ L+ YQ GL W+V++Y +LNGILADEMGLGKTI TIA++++L K GP
Sbjct: 1703 PALLEGGKLKPYQMQGLQWMVSLYNNKLNGILADEMGLGKTIQTIALVSYLIEVKKNNGP 1762
Query: 507 HLIVVPTSVMLNWETEFLKWCPAFKILTYFGSAKERKFKRQGWLKPNSFHVCITTYRLII 566
L+VVP S + NW EF KW P K + Y+G RK K + ++ P F+ +TTY II
Sbjct: 1763 FLVVVPLSTLSNWGQEFSKWAPKVKRVLYYGDKPARKSKFEEFIAPGQFNAVVTTYEYII 1822
Query: 567 QDSKVFKRKKWKYLILDEAHLIKNWKSQRWQTL-LNFNSKRRILLTGTPLQNDLMELWSL 625
+D + KW YLI+DE H +KN+ S+ L +++S+ R+LLTGTPLQN L ELW+L
Sbjct: 1823 KDKNALSKIKWNYLIVDEGHRMKNYTSKLSIILGTSYSSRYRLLLTGTPLQNSLPELWAL 1882
Query: 626 MHFLMPHIFQSHQEFKDWFCNPIS--G-MVEGQEKVNKEVVDRLHNVLRPFILRRLKRDV 682
++FL+P IF ++F+ WF P + G +E E+ ++ RLH VLRPF+LRRLK++V
Sbjct: 1883 LNFLLPTIFDCVEDFEQWFNAPFAQTGEKIEMNEEEQLLIIQRLHKVLRPFLLRRLKKEV 1942
Query: 683 EKQLPMKQEHVIYCRLSKRQRNLYEDFIASSETQATLASANFF--------GMISVIMQL 734
E QLP K E V+ C +S Q +Y+ + ++ + LAS+ G+ + +QL
Sbjct: 1943 EAQLPDKVEKVLKCDMSAFQAKMYD--LIKTKGVSKLASSGGADGNPKLAKGLKNTYVQL 2000
Query: 735 RKVCNHPDLF 744
RK+CNHP LF
Sbjct: 2001 RKICNHPYLF 2010
Score = 443 (161.0 bits), Expect = 5.2e-97, Sum P(5) = 5.2e-97
Identities = 88/170 (51%), Positives = 123/170 (72%)
Query: 984 YFPDRRLIQFDCGKLQELAILLRKLKSDGHRALIFTQMTKMLDILEEFISLYGYTYMRLD 1043
Y D LI++ GK L LL KLK+ GHR LIF+QMT++++ILE F + Y ++RLD
Sbjct: 2015 YNIDDNLIRY-AGKFDLLDRLLPKLKAAGHRVLIFSQMTQLINILEVFFAYKDYKFLRLD 2073
Query: 1044 GSTQPEERQTLMQRFNT-NPKIFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQ 1102
GST+ +ER L++ FN N + F+F+LSTR+GG+G+NL ADTVI +DSDWNP MD QAQ
Sbjct: 2074 GSTKSDERGHLLELFNAPNSEYFIFVLSTRAGGLGLNLQTADTVIIFDSDWNPQMDLQAQ 2133
Query: 1103 DRCHRIGQTREVHIYRLISESTIEENILKKANQKRALDDLVIQSGGYNTE 1152
DR HRIGQ + V + RL++ ++EE+IL +AN K+ LD +IQ+G +N +
Sbjct: 2134 DRAHRIGQKQTVRVLRLVTAHSVEESILARANFKKELDKKIIQAGQFNNK 2183
Score = 52 (23.4 bits), Expect = 5.2e-97, Sum P(5) = 5.2e-97
Identities = 14/68 (20%), Positives = 32/68 (47%)
Query: 67 QTERYSSMLAE-NLVDSHK--PVQQSPMREQPGIQYKEADENGAEEPGVQSKEADEDDAE 123
+ + Y+ +L + N++ K VQQ ++Q Q ++ + +P Q ++ + +
Sbjct: 338 ELDLYNKILRQHNILVQRKLAMVQQQQQQQQQQQQQQQQPQQQQHQPQTQQQQQQQQQQQ 397
Query: 124 QHSGFEPQ 131
Q +PQ
Sbjct: 398 QSPQQQPQ 405
Score = 51 (23.0 bits), Expect = 5.2e-97, Sum P(5) = 5.2e-97
Identities = 23/85 (27%), Positives = 38/85 (44%)
Query: 1878 VPKSQSLGKH-KLSLSDSVKCPKSKLRKTSMEHSEIQHSSPEPVSNQSVATKDANLRFDL 1936
+ K LG L+ S+K P S + +E+ E+Q + + + + K AN +
Sbjct: 2267 ITKEVELGDDLSFVLNQSIK-PGSSKKSLDLEN-ELQIR--KILESGKIKRKTANNNA-M 2321
Query: 1937 IQEAWLEDMDGGRLSCMDQDLSLET 1961
I E + +D DG S D D E+
Sbjct: 2322 ISEFFDDDDDGSSSSSSDSDSDFES 2346
Score = 50 (22.7 bits), Expect = 8.5e-97, Sum P(5) = 8.5e-97
Identities = 14/68 (20%), Positives = 34/68 (50%)
Query: 59 KQLEFLLGQTERYSSMLAENLVDSHKPVQQSPMREQPGIQYKEAD--ENGAEEPGVQSKE 116
+Q LL Q ++ +L + + +QQ +++Q +Q ++A + A++ Q ++
Sbjct: 184 QQYHLLLQQQQQQQQLLQQQ--QQQQQLQQQQLQQQQ-LQQQQAQLQQQQAQQQQAQQQQ 240
Query: 117 ADEDDAEQ 124
+ A+Q
Sbjct: 241 QQQQQAQQ 248
Score = 49 (22.3 bits), Expect = 1.1e-96, Sum P(5) = 1.1e-96
Identities = 16/82 (19%), Positives = 39/82 (47%)
Query: 44 KHQMEVDVRKKKALDKQLEFLLGQTERYSSMLAENLVDSHKPVQQSPMREQPGIQYKEAD 103
+ Q + +++++ +Q + L ++Y ++ H QQ P ++QP IQ ++
Sbjct: 387 QQQQQQQQQQQQSPQQQPQQFLQPQQQYHQHHQQHQQHQH---QQQPQQQQPQIQQQQ-- 441
Query: 104 ENGAEEPGVQSKEADEDDAEQH 125
+ A E ++ ++ +QH
Sbjct: 442 QQAAYEAQLKQQQMKHQQ-QQH 462
Score = 48 (22.0 bits), Expect = 1.4e-96, Sum P(5) = 1.4e-96
Identities = 11/66 (16%), Positives = 30/66 (45%)
Query: 59 KQLEFLLGQTERYSSMLAENLVDSHKPVQQSPMREQPGIQYKEADENGAEEPGVQSKEAD 118
+Q + LL Q ++ + + L QQ+ +++Q Q + + ++ Q+++
Sbjct: 194 QQQQQLLQQQQQQQQLQQQQLQQQQLQQQQAQLQQQQAQQQQAQQQQQQQQQAQQAQQQQ 253
Query: 119 EDDAEQ 124
+ +Q
Sbjct: 254 QQQQQQ 259
Score = 46 (21.3 bits), Expect = 1.7e-96, Sum P(5) = 1.7e-96
Identities = 14/37 (37%), Positives = 21/37 (56%)
Query: 1460 DDDFYDEDATFSDAMSPPSTSQKKRKKAELALYDDEE 1496
++D YD + A +P T+ KRK+ E + Y DEE
Sbjct: 2400 NNDDYDNNNVSVVATTPSRTN--KRKELE-SNYSDEE 2433
Score = 44 (20.5 bits), Expect = 3.6e-96, Sum P(5) = 3.6e-96
Identities = 13/69 (18%), Positives = 31/69 (44%)
Query: 67 QTERYSSMLAENLVDSHKPVQQSPMREQPGIQYKEADENGAEEPGVQSKEADEDDAEQHS 126
Q ++Y +L + + +QQ ++Q Q + + ++ +Q ++A + A+Q
Sbjct: 182 QQQQYHLLLQQQQ-QQQQLLQQQQQQQQLQQQQLQQQQLQQQQAQLQQQQAQQQQAQQQQ 240
Query: 127 GFEPQLDAA 135
+ Q A
Sbjct: 241 QQQQQAQQA 249
Score = 44 (20.5 bits), Expect = 8.1e-33, Sum P(5) = 8.1e-33
Identities = 11/56 (19%), Positives = 29/56 (51%)
Query: 678 LKRDVEKQLPMKQEHV-IYCRLSKRQRNLYEDFIASSETQAT-LASANFFGMISVI 731
+++ ++Q+P K +HV +Y Y+ ++ + +T T ++ N+ I+ +
Sbjct: 270 MQQQQQQQVPTKNQHVEVYVVSVFHYFYYYQRYLDNLQTNGTDISEPNYQSCINFL 325
Score = 43 (20.2 bits), Expect = 5.2e-97, Sum P(5) = 5.2e-97
Identities = 10/22 (45%), Positives = 18/22 (81%)
Query: 316 SNNYIDEIA-LLQKESEIPVEE 336
+N ++D+I+ LLQKE +I ++E
Sbjct: 1386 TNEFLDKISHLLQKE-KISIQE 1406
Score = 43 (20.2 bits), Expect = 4.5e-96, Sum P(5) = 4.5e-96
Identities = 20/91 (21%), Positives = 36/91 (39%)
Query: 44 KHQMEVDVRKKKALDKQLEFLLGQTERYSSMLA--ENLVDS-HKPVQQSPMREQPGIQYK 100
+HQ + + +Q E L Q ++ L ENL + QQ P + Q Q +
Sbjct: 1005 QHQQSQQ-QSENLQQQQPEHLQQQQQQQQEHLQQPENLQPQPQQQSQQQPEQVQSSEQTQ 1063
Query: 101 EADENGAEEPGVQSKEADEDDAEQHSGFEPQ 131
E +++++ +Q S +PQ
Sbjct: 1064 SMQAQQQPEQNQPQQQSEQITQQQQSQQDPQ 1094
Score = 42 (19.8 bits), Expect = 4.5e-96, Sum P(5) = 4.5e-96
Identities = 12/48 (25%), Positives = 17/48 (35%)
Query: 1213 EQEEAVDNQEFTEEAVGRPEDDELVIEDTVRTDEPTDQGGCMTANNDN 1260
E E +N+E E RP D D + M +N +N
Sbjct: 3025 ENRENRENREHREHRDNRPNRDNREFRDYSSNSSGNNNNNNMISNFNN 3072
Score = 42 (19.8 bits), Expect = 5.8e-96, Sum P(5) = 5.8e-96
Identities = 13/81 (16%), Positives = 39/81 (48%)
Query: 48 EVDVRKKKALDKQLEFLLGQTERYSSMLAENLVDSHKPVQQSPMREQPGIQYKEADENGA 107
E +++++ +Q + L Q ++ ++ + N+ + P Q M++Q +Q ++ +
Sbjct: 447 EAQLKQQQMKHQQQQHL--QHQQNMNVTSPNMTSPNIPSTQQLMQQQLLLQQQQQQQQQQ 504
Query: 108 EEPGVQSKEADEDDAEQ---H 125
++ Q ++ + +Q H
Sbjct: 505 QQQQQQQQQQQQQQQQQQQQH 525
Score = 41 (19.5 bits), Expect = 5.8e-96, Sum P(5) = 5.8e-96
Identities = 14/46 (30%), Positives = 22/46 (47%)
Query: 1442 TSESKAVKEEPSVEPMSIDDDFYDEDATFSDAMSPPSTSQKKRKKA 1487
T++ K ++ S E DDD DE+ + P S+K+ K A
Sbjct: 2419 TNKRKELESNYSDE--EDDDDDADEEDEEDEDFQRPVRSKKRAKVA 2462
Score = 41 (19.5 bits), Expect = 7.3e-96, Sum P(5) = 7.3e-96
Identities = 9/83 (10%), Positives = 33/83 (39%)
Query: 43 YKHQMEVDVRKKKALDKQLEFLLGQTERYSSMLAENLVDSHKPVQQSPMREQPGIQYKEA 102
Y + ++ + + + + ++ Q + + A+ + +QQ ++Q Q ++
Sbjct: 72 YNMPLSIEQQIQNQMMQSQQYQQAQQQHQAQQQAQQHAQQQQQLQQQQQQQQQQQQQQQQ 131
Query: 103 DENGAEEPGVQSKEADEDDAEQH 125
+ + ++ + +QH
Sbjct: 132 QQQQQQHQQQHQQQQLQQQQQQH 154
Score = 39 (18.8 bits), Expect = 8.1e-33, Sum P(5) = 8.1e-33
Identities = 7/33 (21%), Positives = 19/33 (57%)
Query: 871 QKKPVYSTSLRELLTVKHPVCDILQQKTVRRSY 903
Q++ ++ L++ ++H +LQQ +++Y
Sbjct: 892 QQQMLHQKLLQQQRLIQHQQSQLLQQPQAQQTY 924
Score = 38 (18.4 bits), Expect = 1.5e-95, Sum P(5) = 1.5e-95
Identities = 16/82 (19%), Positives = 32/82 (39%)
Query: 54 KKALDKQLEFLLGQTERYSSMLAENLVDSHKPVQQSPMREQPGIQ--YKE--ADENGAEE 109
+K L +Q Q++ A+ +P Q + QP Q Y++ A + +
Sbjct: 898 QKLLQQQRLIQHQQSQLLQQPQAQQTYQQTQPQTQQTQQTQPQTQQTYQQPQAQQTYQQT 957
Query: 110 PGVQSKEADEDDAEQHSGFEPQ 131
Q + + +Q + +PQ
Sbjct: 958 QQAQQTQQTQPQTQQQTQPQPQ 979
Score = 37 (18.1 bits), Expect = 1.5e-95, Sum P(5) = 1.5e-95
Identities = 12/42 (28%), Positives = 20/42 (47%)
Query: 1444 ESKAVKEEPSVEPMSIDDDFYDEDATFSDAMSPPSTSQKKRK 1485
ES +K + + I + F+D+D S + S S S + K
Sbjct: 2307 ESGKIKRKTANNNAMISE-FFDDDDDGSSSSSSDSDSDFESK 2347
>UNIPROTKB|J9P5P2 [details] [associations]
symbol:SMARCA2 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001487 InterPro:IPR001650
InterPro:IPR006576 InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271
Pfam:PF00439 Pfam:PF07533 Pfam:PF08880 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297 SMART:SM00490
SMART:SM00592 SMART:SM00951 GO:GO:0005524 GO:GO:0005634
GO:GO:0006355 GO:GO:0003677 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 KO:K11647
GeneTree:ENSGT00550000074659 InterPro:IPR013999 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 SMART:SM00573 PROSITE:PS51204
CTD:6595 OMA:PQEGMHQ EMBL:AAEX03000600 RefSeq:XP_850159.1
Ensembl:ENSCAFT00000046362 GeneID:476335 KEGG:cfa:476335
Uniprot:J9P5P2
Length = 1574
Score = 648 (233.2 bits), Expect = 5.2e-97, Sum P(4) = 5.2e-97
Identities = 140/316 (44%), Positives = 198/316 (62%)
Query: 442 QVRTKFPFLLKFPLREYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTIAMLAHLACEK 501
+V + L+ L+ YQ GL+W+V++Y LNGILADEMGLGKTI TIA++ +L K
Sbjct: 695 RVEKQSALLINGTLKHYQLQGLEWMVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHK 754
Query: 502 GIWGPHLIVVPTSVMLNWETEFLKWCPAFKILTYFGS-AKERKFKRQGWLKPNSFHVCIT 560
+ GP+LI+VP S + NW EF KW P+ ++Y G+ A R Q L+ F+V +T
Sbjct: 755 RLNGPYLIIVPLSTLSNWTYEFDKWAPSVVKISYKGTPAMRRSLVPQ--LRSGKFNVLLT 812
Query: 561 TYRLIIQDSKVFKRKKWKYLILDEAHLIKNWKSQRWQTL-LNFNSKRRILLTGTPLQNDL 619
TY II+D + + +WKY+I+DE H +KN + Q L ++ + RRILLTGTPLQN L
Sbjct: 813 TYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRILLTGTPLQNKL 872
Query: 620 MELWSLMHFLMPHIFQSHQEFKDWFCNPISGMVEGQEKVNKE----VVDRLHNVLRPFIL 675
ELW+L++FL+P IF+S F+ WF P + M + +N+E ++ RLH VLRPF+L
Sbjct: 873 PELWALLNFLLPTIFKSCSTFEQWFNAPFA-MTGERVDLNEEETILIIRRLHKVLRPFLL 931
Query: 676 RRLKRDVEKQLPMKQEHVIYCRLSKRQRNLYEDFIASSE--TQATLASANFFG----MIS 729
RRLK++VE QLP K E+VI C +S Q+ LY A T + G +++
Sbjct: 932 RRLKKEVESQLPEKVEYVIKCDMSALQKILYRHMQAKGILLTDGSEKDKKGKGGAKTLMN 991
Query: 730 VIMQLRKVCNHPDLFE 745
IMQLRK+CNHP +F+
Sbjct: 992 TIMQLRKICNHPYMFQ 1007
Score = 392 (143.0 bits), Expect = 5.2e-97, Sum P(4) = 5.2e-97
Identities = 73/156 (46%), Positives = 109/156 (69%)
Query: 996 GKLQELAILLRKLKSDGHRALIFTQMTKMLDILEEFISLYGYTYMRLDGSTQPEERQTLM 1055
GK + L +L KL++ HR L+F QMT ++ I+E++ + + Y+RLDG+T+ E+R L+
Sbjct: 1034 GKFELLDRILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRLDGTTKSEDRAALL 1093
Query: 1056 QRFNT-NPKIFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQDRCHRIGQTREV 1114
++FN + F+F+LSTR+GG+G+NL ADTV+ +DSDWNP D QAQDR HRIGQ EV
Sbjct: 1094 KKFNEPGSQYFIFLLSTRAGGLGLNLQAADTVVIFDSDWNPHQDLQAQDRAHRIGQQNEV 1153
Query: 1115 HIYRLISESTIEENILKKANQKRALDDLVIQSGGYN 1150
+ RL + +++EE IL A K +D VIQ+G ++
Sbjct: 1154 RVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFD 1189
Score = 82 (33.9 bits), Expect = 5.2e-97, Sum P(4) = 5.2e-97
Identities = 30/102 (29%), Positives = 51/102 (50%)
Query: 25 NISKDVKKFWMKIEKLVLYKHQMEVDVRKKKALD----KQLEFLLGQTERYSSMLAENLV 80
N ++ KK +IEK + + E + +K +D ++L +LL QT+ Y + L NLV
Sbjct: 470 NTEREQKKETERIEKERMRRLMAEDEEGYRKLIDQKKDRRLAYLLQQTDEYVANLT-NLV 528
Query: 81 DSHKPVQQSPMREQPGIQYKEADE--NGAEEP-GVQSKEADE 119
HK Q + +++ + K+A+E G E G + DE
Sbjct: 529 WEHKQAQAAKEKKKRRRRKKKAEEIAEGGESALGPDGEPIDE 570
Score = 46 (21.3 bits), Expect = 5.2e-97, Sum P(4) = 5.2e-97
Identities = 19/102 (18%), Positives = 45/102 (44%)
Query: 1154 FKKLDPMELFSGHRTLPMKTMQKEKAI--NNGNEVSLSNADVEAALKCVEDEADYMALKR 1211
FKK+ E H+ + ++K+ + +N +L + + ++ K
Sbjct: 1433 FKKIK--ERIRNHKYRSLGDLEKDVMLLCHNAQTFNLEGSQIYEDSIVLQSVFKSARQKI 1490
Query: 1212 AEQEEAVD--NQEFTEEAVGRPEDDELVIEDTVRTDEPTDQG 1251
A++EE+ D N+E EE E + ++ ++ ++ ++G
Sbjct: 1491 AKEEESEDESNEEEEEEDEEESESEAKSVKVKIKLNKKDEKG 1532
Score = 46 (21.3 bits), Expect = 2.8e-96, Sum P(5) = 2.8e-96
Identities = 14/47 (29%), Positives = 24/47 (51%)
Query: 1442 TSESKAVKEEPSVEPMSIDDDFYDEDATFSDAMSPPSTSQKKRKKAE 1488
++ K KEE S + + +++ DE+ + S+A S K KK E
Sbjct: 1485 SARQKIAKEEESEDESNEEEEEEDEEESESEAKSV-KVKIKLNKKDE 1530
Score = 44 (20.5 bits), Expect = 4.5e-96, Sum P(5) = 4.5e-96
Identities = 8/33 (24%), Positives = 19/33 (57%)
Query: 1928 KDANLRFDLIQEAWLEDMDGGRLSCMDQDLSLE 1960
+D + L ++ WL ++ G L M++++ L+
Sbjct: 1296 RDVDYSDALTEKQWLRAIEDGNLEEMEEEVRLK 1328
Score = 40 (19.1 bits), Expect = 2.8e-96, Sum P(5) = 2.8e-96
Identities = 15/60 (25%), Positives = 27/60 (45%)
Query: 1190 NADVEAALKCVEDEADYMALKRAEQEEAVDNQEFTEEAVGRPEDDELVIEDTVRTDEPTD 1249
N D + + D+ +RA + ++++E EE P DDE + + R +E D
Sbjct: 1177 NVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEENEEEDEVP-DDETLNQMIARREEEFD 1235
Score = 39 (18.8 bits), Expect = 8.5e-92, Sum P(5) = 8.5e-92
Identities = 10/38 (26%), Positives = 18/38 (47%)
Query: 95 PGIQYKEADENGAEEPGVQSKEADEDDAEQHSGFEPQL 132
PG Y+ A + +EE +E DE++ E ++
Sbjct: 609 PG--YEVAPRSDSEESDSDYEEEDEEEESSRQDTEEKI 644
Score = 38 (18.4 bits), Expect = 1.9e-95, Sum P(5) = 1.9e-95
Identities = 9/31 (29%), Positives = 15/31 (48%)
Query: 1743 KSTREPARRVKFTNLGQSSKLLSAALHDANS 1773
K +E R K+ +LG K + H+A +
Sbjct: 1434 KKIKERIRNHKYRSLGDLEKDVMLLCHNAQT 1464
>UNIPROTKB|A7Z019 [details] [associations]
symbol:SMARCA4 "Transcription activator BRG1" species:9913
"Bos taurus" [GO:0071565 "nBAF complex" evidence=ISS] [GO:0071564
"npBAF complex" evidence=ISS] [GO:0060347 "heart trabecula
formation" evidence=IEA] [GO:0060318 "definitive erythrocyte
differentiation" evidence=IEA] [GO:0048730 "epidermis
morphogenesis" evidence=IEA] [GO:0048562 "embryonic organ
morphogenesis" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0043966 "histone H3 acetylation" evidence=IEA] [GO:0043388
"positive regulation of DNA binding" evidence=IEA] [GO:0035887
"aortic smooth muscle cell differentiation" evidence=IEA]
[GO:0035116 "embryonic hindlimb morphogenesis" evidence=IEA]
[GO:0030902 "hindbrain development" evidence=IEA] [GO:0030900
"forebrain development" evidence=IEA] [GO:0030216 "keratinocyte
differentiation" evidence=IEA] [GO:0030198 "extracellular matrix
organization" evidence=IEA] [GO:0019827 "stem cell maintenance"
evidence=IEA] [GO:0010424 "DNA methylation on cytosine within a CG
sequence" evidence=IEA] [GO:0008134 "transcription factor binding"
evidence=IEA] [GO:0007403 "glial cell fate determination"
evidence=IEA] [GO:0006346 "methylation-dependent chromatin
silencing" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=IEA] [GO:0005726 "perichromatin fibrils" evidence=IEA]
[GO:0005719 "nuclear euchromatin" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0001889 "liver development"
evidence=IEA] [GO:0001835 "blastocyst hatching" evidence=IEA]
[GO:0001832 "blastocyst growth" evidence=IEA] [GO:0001570
"vasculogenesis" evidence=IEA] [GO:0000977 "RNA polymerase II
regulatory region sequence-specific DNA binding" evidence=IEA]
[GO:0000902 "cell morphogenesis" evidence=IEA] [GO:0000792
"heterochromatin" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] InterPro:IPR000330 InterPro:IPR001487
InterPro:IPR001650 InterPro:IPR006576 InterPro:IPR014978
Pfam:PF00176 Pfam:PF00271 Pfam:PF00439 Pfam:PF07533 Pfam:PF08880
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297
SMART:SM00490 SMART:SM00592 SMART:SM00951 GO:GO:0005524
GO:GO:0030216 GO:GO:0045944 GO:GO:0030198 GO:GO:0030900
GO:GO:0001889 GO:GO:0006351 GO:GO:0003682 GO:GO:0006338
GO:GO:0000122 GO:GO:0071564 GO:GO:0071565 GO:GO:0000902
GO:GO:0004386 GO:GO:0001570 GO:GO:0035116 GO:GO:0005719
GO:GO:0030902 GO:GO:0048730 GO:GO:0000977 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0019827
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 GO:GO:0000792 GO:GO:0060347 GO:GO:0043966
GO:GO:0043388 KO:K11647 InterPro:IPR013999 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 SMART:SM00573 PROSITE:PS51204
GO:GO:0001835 GO:GO:0007403 GO:GO:0006346 GO:GO:0010424
GO:GO:0060318 GO:GO:0048562 GO:GO:0001832 GO:GO:0005726
HOGENOM:HOG000172363 HOVERGEN:HBG056636 GO:GO:0035887
OrthoDB:EOG418BMJ EMBL:BC153216 IPI:IPI00693529
RefSeq:NP_001099084.1 UniGene:Bt.27590 ProteinModelPortal:A7Z019
SMR:A7Z019 STRING:A7Z019 PRIDE:A7Z019 GeneID:414274 KEGG:bta:414274
CTD:6597 InParanoid:A7Z019 NextBio:20818684 ArrayExpress:A7Z019
Uniprot:A7Z019
Length = 1606
Score = 657 (236.3 bits), Expect = 7.1e-97, Sum P(4) = 7.1e-97
Identities = 144/318 (45%), Positives = 200/318 (62%)
Query: 440 TTQVRTKFPFLLKFPLREYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTIAMLAHLAC 499
T +V + ++ L++YQ GL+WLV++Y LNGILADEMGLGKTI TIA++ +L
Sbjct: 731 TERVDKQSALMVNGVLKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIALITYLME 790
Query: 500 EKGIWGPHLIVVPTSVMLNWETEFLKWCPAFKILTYFGS-AKERKFKRQGWLKPNSFHVC 558
K I GP LI+VP S + NW EF KW P+ ++Y GS A R F Q L+ F+V
Sbjct: 791 HKRINGPFLIIVPLSTLSNWAYEFDKWAPSVVKVSYKGSPAARRAFVPQ--LRSGKFNVL 848
Query: 559 ITTYRLIIQDSKVFKRKKWKYLILDEAHLIKNWKSQRWQTL-LNFNSKRRILLTGTPLQN 617
+TTY II+D + + +WKY+I+DE H +KN + Q L ++ + RR+LLTGTPLQN
Sbjct: 849 LTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRLLLTGTPLQN 908
Query: 618 DLMELWSLMHFLMPHIFQSHQEFKDWFCNPISGMVEGQEKVNKE----VVDRLHNVLRPF 673
L ELW+L++FL+P IF+S F+ WF P + M + +N+E ++ RLH VLRPF
Sbjct: 909 KLPELWALLNFLLPTIFKSCSTFEQWFNAPFA-MTGEKVDLNEEETILIIRRLHKVLRPF 967
Query: 674 ILRRLKRDVEKQLPMKQEHVIYCRLSKRQRNLYEDFIASSE--TQATLASANFFG----M 727
+LRRLK++VE QLP K E+VI C +S QR LY A T + G +
Sbjct: 968 LLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVLLTDGSEKDKKGKGGTKTL 1027
Query: 728 ISVIMQLRKVCNHPDLFE 745
++ IMQLRK+CNHP +F+
Sbjct: 1028 MNTIMQLRKICNHPYMFQ 1045
Score = 393 (143.4 bits), Expect = 7.1e-97, Sum P(4) = 7.1e-97
Identities = 94/258 (36%), Positives = 146/258 (56%)
Query: 996 GKLQELAILLRKLKSDGHRALIFTQMTKMLDILEEFISLYGYTYMRLDGSTQPEERQTLM 1055
GK + L +L KL++ H+ L+F QMT ++ I+E++ + G+ Y+RLDG+T+ E+R L+
Sbjct: 1072 GKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLL 1131
Query: 1056 QRFNT-NPKIFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQDRCHRIGQTREV 1114
+ FN + F+F+LSTR+GG+G+NL ADTVI +DSDWNP D QAQDR HRIGQ EV
Sbjct: 1132 KTFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEV 1191
Query: 1115 HIYRLISESTIEENILKKANQKRALDDLVIQSGGYNTEFFKKLDPMELFSGHRTLPMKTM 1174
+ RL + +++EE IL A K +D VIQ+G ++ +K E R +
Sbjct: 1192 RVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFD----QKSSSHE----RRAFLQAIL 1243
Query: 1175 QKEKAINNGNEVSLSNADVEAALKCVEDEAD-YMALKRAEQEEAVDNQEFTEEAVGRPED 1233
+ E+ +EV + V + E+E D +M + + E N + + E+
Sbjct: 1244 EHEEQDEEEDEVP-DDETVNQMIARHEEEFDLFMRMDLDRRREEARNPKRKPRLM---EE 1299
Query: 1234 DEL---VIEDTVRTDEPT 1248
DEL +I+D + T
Sbjct: 1300 DELPSWIIKDDAEVERLT 1317
Score = 80 (33.2 bits), Expect = 7.1e-97, Sum P(4) = 7.1e-97
Identities = 29/106 (27%), Positives = 51/106 (48%)
Query: 25 NISKDVKKFWMKIEKLVLYKHQMEVDVRKKKALD----KQLEFLLGQTERYSSMLAENLV 80
N ++ KK +IEK + + E + +K +D K+L +LL QT+ Y + L E LV
Sbjct: 502 NTEREQKKENERIEKERMRRLMAEDEEGYRKLIDQKKDKRLAYLLQQTDEYVANLTE-LV 560
Query: 81 DSHKPVQQSPMREQPGIQYKEADENGAEEPGVQSKEADEDDAEQHS 126
HK Q + +++ + K+A+ + P + D+ Q S
Sbjct: 561 RQHKAAQVAKEKKKKK-KKKKAENAEGQTPAIGPDGEPLDETSQMS 605
Score = 49 (22.3 bits), Expect = 1.2e-93, Sum P(4) = 1.2e-93
Identities = 15/53 (28%), Positives = 25/53 (47%)
Query: 81 DSHKPVQQSPMREQ-PGIQYKEADENGAEEPGVQSKEADEDDAEQHSGFEPQL 132
D+ K Q E PG Y+ A + +EE G + +E +E++ + P L
Sbjct: 624 DAPKAGQLEAWLEMNPG--YEVAPRSDSEESGSEEEEEEEEEEQPQPAQPPTL 674
Score = 41 (19.5 bits), Expect = 4.0e-60, Sum P(4) = 4.0e-60
Identities = 16/60 (26%), Positives = 27/60 (45%)
Query: 1190 NADVEAALKCVEDEADYMALKRAEQEEAVDNQEFTEEAVGRPEDDELVIEDTVRTDEPTD 1249
N D + + D+ +RA + ++++E EE P DDE V + R +E D
Sbjct: 1215 NVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEQDEEEDEVP-DDETVNQMIARHEEEFD 1273
Score = 39 (18.8 bits), Expect = 4.2e-61, Sum P(3) = 4.2e-61
Identities = 18/85 (21%), Positives = 36/85 (42%)
Query: 1154 FKKLDPMELFSGHRTLPMKTMQKEKAI--NNGNEVSLSNADV-EAALKCVEDEADYMALK 1210
FKK+ E H+ + ++K+ + N +L + + E ++ V +
Sbjct: 1466 FKKIK--ERIRNHKYRSLNDLEKDVMLLCQNAQTFNLEGSLIYEDSI--VLQSVFTSVRQ 1521
Query: 1211 RAEQEEAVDNQEFTEEAVGRPEDDE 1235
+ E+E+ + +E EE G E E
Sbjct: 1522 KIEKEDDSEGEESEEEEEGEEEGSE 1546
Score = 38 (18.4 bits), Expect = 5.3e-61, Sum P(3) = 5.3e-61
Identities = 26/131 (19%), Positives = 53/131 (40%)
Query: 1128 NILKKANQKRALDDLV----IQSGGYNTEFFKKLDPMELFSGHRTLPMKTMQKEKA---I 1180
N+ KK K+ +D ++ SG +E F +L + + L K + +K I
Sbjct: 1416 NLTKK--MKKIVDAVIKYKDSSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERI 1473
Query: 1181 NNGNEVSLSNADVEAALKCVEDEADYMALKRAEQEEAVDNQEFTEEAVGRPEDDELVIED 1240
N SL++ + + L C + + ++ V FT ++D+ E+
Sbjct: 1474 RNHKYRSLNDLEKDVMLLCQNAQTFNLEGSLIYEDSIVLQSVFTSVRQKIEKEDDSEGEE 1533
Query: 1241 TVRTDEPTDQG 1251
+ +E ++G
Sbjct: 1534 SEEEEEGEEEG 1544
Score = 37 (18.1 bits), Expect = 7.1e-97, Sum P(4) = 7.1e-97
Identities = 12/48 (25%), Positives = 24/48 (50%)
Query: 1515 RSPDSDSKLSRKRHDGSTELKTCES----IFIDLEQKSASRSKM-GGK 1557
+ DS+ + S + +G E ES + I L +K ++ ++ GG+
Sbjct: 1525 KEDDSEGEESEEEEEGEEEGSESESRSVKVKIKLGRKEKAQDRLKGGR 1572
>SGD|S000005831 [details] [associations]
symbol:ISW2 "ATP-dependent DNA translocase involved in
chromatin remodeling" species:4932 "Saccharomyces cerevisiae"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA;IDA;IPI] [GO:0006338 "chromatin remodeling"
evidence=IEA;IGI;IMP;IPI] [GO:0016818 "hydrolase activity, acting
on acid anhydrides, in phosphorus-containing anhydrides"
evidence=IEA] [GO:0031491 "nucleosome binding" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0060195 "negative
regulation of antisense RNA transcription" evidence=IGI]
[GO:0016584 "nucleosome positioning" evidence=IDA] [GO:0008623
"CHRAC" evidence=ISS;IPI] [GO:0046020 "negative regulation of
transcription from RNA polymerase II promoter by pheromones"
evidence=IMP] [GO:0006348 "chromatin silencing at telomere"
evidence=IMP] [GO:0043044 "ATP-dependent chromatin remodeling"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0000183
"chromatin silencing at rDNA" evidence=IMP] [GO:0015616 "DNA
translocase activity" evidence=IDA] [GO:0003697 "single-stranded
DNA binding" evidence=IDA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0006369
"termination of RNA polymerase II transcription" evidence=IGI]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000330
InterPro:IPR001005 InterPro:IPR001650 InterPro:IPR009057
InterPro:IPR015194 InterPro:IPR015195 Pfam:PF00176 Pfam:PF00271
Pfam:PF09110 Pfam:PF09111 PROSITE:PS51194 SMART:SM00490
SMART:SM00717 SGD:S000005831 GO:GO:0005524 EMBL:BK006948
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0006338 GO:GO:0003697
InterPro:IPR017884 PROSITE:PS51293 GO:GO:0000183 GO:GO:0006348
GO:GO:0004386 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0031491 GO:GO:0043044 GO:GO:0016584
GO:GO:0008623 GO:GO:0006369 GO:GO:0046020 GO:GO:0060195
GO:GO:0015616 GeneTree:ENSGT00680000100002 HOGENOM:HOG000192862
SUPFAM:SSF101224 OrthoDB:EOG48SM27 EMBL:Z75212 PIR:S67208
RefSeq:NP_014948.1 ProteinModelPortal:Q08773 SMR:Q08773
DIP:DIP-6603N IntAct:Q08773 MINT:MINT-469536 STRING:Q08773
PaxDb:Q08773 PeptideAtlas:Q08773 PRIDE:Q08773 EnsemblFungi:YOR304W
GeneID:854480 KEGG:sce:YOR304W CYGD:YOR304w OMA:NEQSALS
NextBio:976792 Genevestigator:Q08773 GermOnline:YOR304W
Uniprot:Q08773
Length = 1120
Score = 614 (221.2 bits), Expect = 7.2e-97, Sum P(2) = 7.2e-97
Identities = 129/301 (42%), Positives = 184/301 (61%)
Query: 449 FLLKFPLREYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTIAMLAHLACEKGIWGPHL 508
F+ LR+YQ GL+WL++++E +L+GILADEMGLGKT+ TI+ L +L K I GP L
Sbjct: 178 FVKSGKLRDYQVQGLNWLISLHENKLSGILADEMGLGKTLQTISFLGYLRYVKQIEGPFL 237
Query: 509 IVVPTSVMLNWETEFLKWCPAFKILTYFGSAKERKFKRQGWLKPNSFHVCITTYRLIIQD 568
I+VP S + NW EFLKW P +L G R + + F V IT+Y ++I++
Sbjct: 238 IIVPKSTLDNWRREFLKWTPNVNVLVLHGDKDTRADIVRNIILEARFDVLITSYEMVIRE 297
Query: 569 SKVFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPLQNDLMELWSLMHF 628
KR W+Y+++DEAH IKN +S Q + F SK R+L+TGTPLQN+L ELW+L++F
Sbjct: 298 KNALKRLAWQYIVIDEAHRIKNEQSALSQIIRLFYSKNRLLITGTPLQNNLHELWALLNF 357
Query: 629 LMPHIFQSHQEFKDWFCNPISGMVEGQEKVNKEVVDRLHNVLRPFILRRLKRDVEKQLPM 688
L+P IF + F +WF S E +++ V+ +LH+VL PF+LRR+K DVEK L
Sbjct: 358 LLPDIFGDSELFDEWFEQNNS---EQDQEI---VIQQLHSVLNPFLLRRVKADVEKSLLP 411
Query: 689 KQEHVIYCRLSKRQRNLYEDFIASSETQATLASANFFG---MISVIMQLRKVCNHPDLFE 745
K E +Y ++ Q Y+ + A G +++++MQLRK CNHP LFE
Sbjct: 412 KIETNVYVGMTDMQIQWYKSLLEKDIDAVNGAVGKREGKTRLLNIVMQLRKCCNHPYLFE 471
Query: 746 G 746
G
Sbjct: 472 G 472
Score = 442 (160.7 bits), Expect = 7.2e-97, Sum P(2) = 7.2e-97
Identities = 104/263 (39%), Positives = 157/263 (59%)
Query: 984 YFPDRRLIQFDCGKLQELAILLRKLKSDGHRALIFTQMTKMLDILEEFISLYGYTYMRLD 1043
Y D LI F+ GK+ L LL++LK G R LIF+QM+++LDILE++ + Y R+D
Sbjct: 479 YTTDEHLI-FNSGKMIILDKLLKRLKEKGSRVLIFSQMSRLLDILEDYCYFRDFEYCRID 537
Query: 1044 GSTQPEERQTLMQRFNT-NPKIFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQ 1102
GST EER + +N N + F+F+L+TR+GG+GINLV ADTVI +DSDWNP D QA
Sbjct: 538 GSTSHEERIEAIDEYNKPNSEKFVFLLTTRAGGLGINLVTADTVILFDSDWNPQADLQAM 597
Query: 1103 DRCHRIGQTREVHIYRLISESTIEENILKKANQKRALDDLVIQSG-GYNTEFF--KKLDP 1159
DR HRIGQ ++VH+YR ++E+ IEE ++++A QK LD LVIQ G G T K D
Sbjct: 598 DRAHRIGQKKQVHVYRFVTENAIEEKVIERAAQKLRLDQLVIQQGTGKKTASLGNSKDDL 657
Query: 1160 MELFSGHRTLPMKTMQKEKAINNGNEVSLSNADVEAALKCVEDEADYMALKRAEQEE--A 1217
+++ K M ++KA + + + + K E A Y +L + ++
Sbjct: 658 LDMIQ----FGAKNMFEKKASKVTVDADIDDILKKGEQKTQELNAKYQSLGLDDLQKFNG 713
Query: 1218 VDNQ---EFTEEAVGRPEDDELV 1237
++NQ E+ ++ + +D++V
Sbjct: 714 IENQSAYEWNGKSFQKKSNDKVV 736
Score = 38 (18.4 bits), Expect = 3.3e-53, Sum P(3) = 3.3e-53
Identities = 12/48 (25%), Positives = 19/48 (39%)
Query: 1270 KEERALTFAAKEDDVDMLADVKQMXXXXXXXGEAISSFENQLRPIDRY 1317
K R L F+ +D+L D + +S E ++ ID Y
Sbjct: 505 KGSRVLIFSQMSRLLDILEDYCYFRDFEYCRIDGSTSHEERIEAIDEY 552
Score = 38 (18.4 bits), Expect = 3.3e-53, Sum P(3) = 3.3e-53
Identities = 14/59 (23%), Positives = 28/59 (47%)
Query: 1640 ERFRELIQRY-ILSVPD----NSINEKTSNVGSGKALLKVTEDNVRTLLNVAAEQEDNE 1693
++ +EL +Y L + D N I +++ +GK+ K + D V +N + + E
Sbjct: 691 QKTQELNAKYQSLGLDDLQKFNGIENQSAYEWNGKSFQKKSNDKVVEWINPSRRERRRE 749
>MGI|MGI:88192 [details] [associations]
symbol:Smarca4 "SWI/SNF related, matrix associated, actin
dependent regulator of chromatin, subfamily a, member 4"
species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IMP;IDA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0000790 "nuclear
chromatin" evidence=ISO] [GO:0000792 "heterochromatin"
evidence=IDA] [GO:0000902 "cell morphogenesis" evidence=IMP]
[GO:0000977 "RNA polymerase II regulatory region sequence-specific
DNA binding" evidence=IDA] [GO:0001105 "RNA polymerase II
transcription coactivator activity" evidence=ISO] [GO:0001570
"vasculogenesis" evidence=IMP] [GO:0001701 "in utero embryonic
development" evidence=IMP] [GO:0001832 "blastocyst growth"
evidence=IMP] [GO:0001835 "blastocyst hatching" evidence=IMP]
[GO:0001889 "liver development" evidence=IMP] [GO:0002039 "p53
binding" evidence=ISO] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IDA] [GO:0003713 "transcription
coactivator activity" evidence=ISO] [GO:0003714 "transcription
corepressor activity" evidence=ISO] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005719 "nuclear euchromatin" evidence=IDA]
[GO:0005726 "perichromatin fibrils" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0006200 "ATP catabolic process"
evidence=TAS] [GO:0006334 "nucleosome assembly" evidence=TAS]
[GO:0006337 "nucleosome disassembly" evidence=ISO] [GO:0006338
"chromatin remodeling" evidence=ISO;IMP] [GO:0006346
"methylation-dependent chromatin silencing" evidence=IDA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0007399 "nervous system development"
evidence=IMP] [GO:0007403 "glial cell fate determination"
evidence=IMP] [GO:0007507 "heart development" evidence=IMP]
[GO:0008094 "DNA-dependent ATPase activity" evidence=ISO]
[GO:0008134 "transcription factor binding" evidence=IPI]
[GO:0010424 "DNA methylation on cytosine within a CG sequence"
evidence=IMP] [GO:0016514 "SWI/SNF complex" evidence=ISO;IDA;TAS]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0016817 "hydrolase activity,
acting on acid anhydrides" evidence=IEA] [GO:0016818 "hydrolase
activity, acting on acid anhydrides, in phosphorus-containing
anhydrides" evidence=IEA] [GO:0016887 "ATPase activity"
evidence=IMP;TAS] [GO:0019827 "stem cell maintenance" evidence=IMP]
[GO:0022008 "neurogenesis" evidence=IDA] [GO:0030198 "extracellular
matrix organization" evidence=IMP] [GO:0030216 "keratinocyte
differentiation" evidence=IMP] [GO:0030308 "negative regulation of
cell growth" evidence=ISO] [GO:0030900 "forebrain development"
evidence=IMP] [GO:0030902 "hindbrain development" evidence=IMP]
[GO:0030957 "Tat protein binding" evidence=ISO] [GO:0032403
"protein complex binding" evidence=ISO] [GO:0035116 "embryonic
hindlimb morphogenesis" evidence=IMP] [GO:0035887 "aortic smooth
muscle cell differentiation" evidence=IMP] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=ISO] [GO:0043388
"positive regulation of DNA binding" evidence=IGI] [GO:0043923
"positive regulation by host of viral transcription" evidence=ISO]
[GO:0043966 "histone H3 acetylation" evidence=IMP] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IGI;ISO;IMP] [GO:0047485
"protein N-terminus binding" evidence=ISO] [GO:0048562 "embryonic
organ morphogenesis" evidence=IMP] [GO:0048730 "epidermis
morphogenesis" evidence=IMP] [GO:0050681 "androgen receptor
binding" evidence=ISO] [GO:0051091 "positive regulation of
sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0060318 "definitive erythrocyte differentiation"
evidence=IMP] [GO:0060347 "heart trabecula formation" evidence=IGI]
[GO:0060766 "negative regulation of androgen receptor signaling
pathway" evidence=ISO] [GO:0070577 "histone acetyl-lysine binding"
evidence=ISO] [GO:0071564 "npBAF complex" evidence=ISO;IDA]
[GO:0071565 "nBAF complex" evidence=IDA] [GO:0071778 "WINAC
complex" evidence=ISO] InterPro:IPR000330 InterPro:IPR001487
InterPro:IPR001650 InterPro:IPR006576 InterPro:IPR014978
Pfam:PF00176 Pfam:PF00271 Pfam:PF00439 Pfam:PF07533 Pfam:PF08880
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297
SMART:SM00490 SMART:SM00592 SMART:SM00951 MGI:MGI:88192
GO:GO:0005524 GO:GO:0003714 GO:GO:0030216 GO:GO:0045944
GO:GO:0030198 GO:GO:0030900 GO:GO:0001889 EMBL:CH466522
GO:GO:0006351 GO:GO:0003682 GO:GO:0016887 GO:GO:0006338
GO:GO:0000122 GO:GO:0071564 GO:GO:0016514 GO:GO:0071565
GO:GO:0000902 GO:GO:0004386 GO:GO:0001570 GO:GO:0035116
GO:GO:0005719 GO:GO:0030902 GO:GO:0048730 GO:GO:0000977
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0019827 GO:GO:0006334 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 GO:GO:0000792 GO:GO:0060347
GO:GO:0043966 GO:GO:0043388 KO:K11647 GeneTree:ENSGT00550000074659
InterPro:IPR013999 InterPro:IPR014012 InterPro:IPR006562
Pfam:PF07529 SMART:SM00573 PROSITE:PS51204 GO:GO:0001835
GO:GO:0007403 GO:GO:0006346 GO:GO:0010424 GO:GO:0060318
GO:GO:0048562 GO:GO:0001832 GO:GO:0005726 HOGENOM:HOG000172363
HOVERGEN:HBG056636 GO:GO:0035887 OrthoDB:EOG418BMJ CTD:6597
EMBL:AK147285 EMBL:AK160825 EMBL:AK166837 EMBL:BC079560
IPI:IPI00875789 IPI:IPI00955124 RefSeq:NP_001167549.1
RefSeq:NP_001167550.1 RefSeq:NP_035547.2 UniGene:Mm.286593
ProteinModelPortal:Q3TKT4 SMR:Q3TKT4 DIP:DIP-40650N DIP:DIP-59249N
IntAct:Q3TKT4 MINT:MINT-1958721 STRING:Q3TKT4 PhosphoSite:Q3TKT4
PaxDb:Q3TKT4 PRIDE:Q3TKT4 Ensembl:ENSMUST00000034707
Ensembl:ENSMUST00000098948 Ensembl:ENSMUST00000174008 GeneID:20586
KEGG:mmu:20586 UCSC:uc009omd.2 UCSC:uc009ome.2 InParanoid:Q3TUD7
NextBio:298883 Bgee:Q3TKT4 Genevestigator:Q3TKT4 Uniprot:Q3TKT4
Length = 1613
Score = 657 (236.3 bits), Expect = 7.4e-97, Sum P(4) = 7.4e-97
Identities = 144/318 (45%), Positives = 200/318 (62%)
Query: 440 TTQVRTKFPFLLKFPLREYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTIAMLAHLAC 499
T +V + ++ L++YQ GL+WLV++Y LNGILADEMGLGKTI TIA++ +L
Sbjct: 739 TERVDKQSALMVNGVLKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIALITYLME 798
Query: 500 EKGIWGPHLIVVPTSVMLNWETEFLKWCPAFKILTYFGS-AKERKFKRQGWLKPNSFHVC 558
K I GP LI+VP S + NW EF KW P+ ++Y GS A R F Q L+ F+V
Sbjct: 799 HKRINGPFLIIVPLSTLSNWAYEFDKWAPSVVKVSYKGSPAARRAFVPQ--LRSGKFNVL 856
Query: 559 ITTYRLIIQDSKVFKRKKWKYLILDEAHLIKNWKSQRWQTL-LNFNSKRRILLTGTPLQN 617
+TTY II+D + + +WKY+I+DE H +KN + Q L ++ + RR+LLTGTPLQN
Sbjct: 857 LTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRLLLTGTPLQN 916
Query: 618 DLMELWSLMHFLMPHIFQSHQEFKDWFCNPISGMVEGQEKVNKE----VVDRLHNVLRPF 673
L ELW+L++FL+P IF+S F+ WF P + M + +N+E ++ RLH VLRPF
Sbjct: 917 KLPELWALLNFLLPTIFKSCSTFEQWFNAPFA-MTGEKVDLNEEETILIIRRLHKVLRPF 975
Query: 674 ILRRLKRDVEKQLPMKQEHVIYCRLSKRQRNLYEDFIASSE--TQATLASANFFG----M 727
+LRRLK++VE QLP K E+VI C +S QR LY A T + G +
Sbjct: 976 LLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVLLTDGSEKDKKGKGGTKTL 1035
Query: 728 ISVIMQLRKVCNHPDLFE 745
++ IMQLRK+CNHP +F+
Sbjct: 1036 MNTIMQLRKICNHPYMFQ 1053
Score = 393 (143.4 bits), Expect = 7.4e-97, Sum P(4) = 7.4e-97
Identities = 94/258 (36%), Positives = 146/258 (56%)
Query: 996 GKLQELAILLRKLKSDGHRALIFTQMTKMLDILEEFISLYGYTYMRLDGSTQPEERQTLM 1055
GK + L +L KL++ H+ L+F QMT ++ I+E++ + G+ Y+RLDG+T+ E+R L+
Sbjct: 1080 GKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLL 1139
Query: 1056 QRFNT-NPKIFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQDRCHRIGQTREV 1114
+ FN + F+F+LSTR+GG+G+NL ADTVI +DSDWNP D QAQDR HRIGQ EV
Sbjct: 1140 KTFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEV 1199
Query: 1115 HIYRLISESTIEENILKKANQKRALDDLVIQSGGYNTEFFKKLDPMELFSGHRTLPMKTM 1174
+ RL + +++EE IL A K +D VIQ+G ++ +K E R +
Sbjct: 1200 RVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFD----QKSSSHE----RRAFLQAIL 1251
Query: 1175 QKEKAINNGNEVSLSNADVEAALKCVEDEAD-YMALKRAEQEEAVDNQEFTEEAVGRPED 1233
+ E+ +EV + V + E+E D +M + + E N + + E+
Sbjct: 1252 EHEEQDEEEDEVP-DDETVNQMIARHEEEFDLFMRMDLDRRREEARNPKRKPRLM---EE 1307
Query: 1234 DEL---VIEDTVRTDEPT 1248
DEL +I+D + T
Sbjct: 1308 DELPSWIIKDDAEVERLT 1325
Score = 80 (33.2 bits), Expect = 7.4e-97, Sum P(4) = 7.4e-97
Identities = 29/106 (27%), Positives = 51/106 (48%)
Query: 25 NISKDVKKFWMKIEKLVLYKHQMEVDVRKKKALD----KQLEFLLGQTERYSSMLAENLV 80
N ++ KK +IEK + + E + +K +D K+L +LL QT+ Y + L E LV
Sbjct: 510 NTEREQKKENERIEKERMRRLMAEDEEGYRKLIDQKKDKRLAYLLQQTDEYVANLTE-LV 568
Query: 81 DSHKPVQQSPMREQPGIQYKEADENGAEEPGVQSKEADEDDAEQHS 126
HK Q + +++ + K+A+ + P + D+ Q S
Sbjct: 569 RQHKAAQVAKEKKKKK-KKKKAENAEGQTPAIGPDGEPLDETSQMS 613
Score = 49 (22.3 bits), Expect = 1.3e-93, Sum P(4) = 1.3e-93
Identities = 15/53 (28%), Positives = 25/53 (47%)
Query: 81 DSHKPVQQSPMREQ-PGIQYKEADENGAEEPGVQSKEADEDDAEQHSGFEPQL 132
D+ K Q E PG Y+ A + +EE G + +E +E++ + P L
Sbjct: 632 DAPKAGQLEAWLEMNPG--YEVAPRSDSEESGSEEEEEEEEEEQPQPAQPPTL 682
Score = 41 (19.5 bits), Expect = 4.1e-60, Sum P(4) = 4.1e-60
Identities = 16/60 (26%), Positives = 27/60 (45%)
Query: 1190 NADVEAALKCVEDEADYMALKRAEQEEAVDNQEFTEEAVGRPEDDELVIEDTVRTDEPTD 1249
N D + + D+ +RA + ++++E EE P DDE V + R +E D
Sbjct: 1223 NVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEQDEEEDEVP-DDETVNQMIARHEEEFD 1281
Score = 39 (18.8 bits), Expect = 4.3e-61, Sum P(3) = 4.3e-61
Identities = 18/85 (21%), Positives = 36/85 (42%)
Query: 1154 FKKLDPMELFSGHRTLPMKTMQKEKAI--NNGNEVSLSNADV-EAALKCVEDEADYMALK 1210
FKK+ E H+ + ++K+ + N +L + + E ++ V +
Sbjct: 1473 FKKIK--ERIRNHKYRSLNDLEKDVMLLCQNAQTFNLEGSLIYEDSI--VLQSVFTSVRQ 1528
Query: 1211 RAEQEEAVDNQEFTEEAVGRPEDDE 1235
+ E+E+ + +E EE G E E
Sbjct: 1529 KIEKEDDSEGEESEEEEEGEEEGSE 1553
Score = 39 (18.8 bits), Expect = 4.3e-61, Sum P(3) = 4.3e-61
Identities = 26/130 (20%), Positives = 53/130 (40%)
Query: 1128 NILKKANQKRALDDLVI---QSGGYNTEFFKKLDPMELFSGHRTLPMKTMQKEKA---IN 1181
N+ KK K+ +D ++ SG +E F +L + + L K + +K I
Sbjct: 1424 NLTKK--MKKIVDAVIKYKDSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIR 1481
Query: 1182 NGNEVSLSNADVEAALKCVEDEADYMALKRAEQEEAVDNQEFTEEAVGRPEDDELVIEDT 1241
N SL++ + + L C + + ++ V FT ++D+ E++
Sbjct: 1482 NHKYRSLNDLEKDVMLLCQNAQTFNLEGSLIYEDSIVLQSVFTSVRQKIEKEDDSEGEES 1541
Query: 1242 VRTDEPTDQG 1251
+E ++G
Sbjct: 1542 EEEEEGEEEG 1551
Score = 37 (18.1 bits), Expect = 7.4e-97, Sum P(4) = 7.4e-97
Identities = 12/48 (25%), Positives = 24/48 (50%)
Query: 1515 RSPDSDSKLSRKRHDGSTELKTCES----IFIDLEQKSASRSKM-GGK 1557
+ DS+ + S + +G E ES + I L +K ++ ++ GG+
Sbjct: 1532 KEDDSEGEESEEEEEGEEEGSESESRSVKVKIKLGRKEKAQDRLKGGR 1579
>RGD|621728 [details] [associations]
symbol:Smarca4 "SWI/SNF related, matrix associated, actin
dependent regulator of chromatin, subfamily a, member 4"
species:10116 "Rattus norvegicus" [GO:0000122 "negative regulation
of transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0000790 "nuclear chromatin" evidence=ISO] [GO:0000792
"heterochromatin" evidence=ISO] [GO:0000902 "cell morphogenesis"
evidence=ISO] [GO:0000977 "RNA polymerase II regulatory region
sequence-specific DNA binding" evidence=ISO] [GO:0001105 "RNA
polymerase II transcription coactivator activity" evidence=ISO]
[GO:0001570 "vasculogenesis" evidence=ISO] [GO:0001701 "in utero
embryonic development" evidence=ISO] [GO:0001832 "blastocyst
growth" evidence=ISO] [GO:0001835 "blastocyst hatching"
evidence=ISO] [GO:0001889 "liver development" evidence=ISO]
[GO:0002039 "p53 binding" evidence=ISO] [GO:0003407 "neural retina
development" evidence=ISO] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=ISO] [GO:0003713
"transcription coactivator activity" evidence=ISO] [GO:0003714
"transcription corepressor activity" evidence=ISO;ISS] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO;IDA] [GO:0005719 "nuclear euchromatin"
evidence=ISO] [GO:0005726 "perichromatin fibrils" evidence=ISO]
[GO:0006337 "nucleosome disassembly" evidence=ISO;IDA] [GO:0006338
"chromatin remodeling" evidence=ISO] [GO:0006346
"methylation-dependent chromatin silencing" evidence=ISO]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA;ISO] [GO:0007403 "glial cell fate determination"
evidence=ISO] [GO:0007507 "heart development" evidence=ISO]
[GO:0008094 "DNA-dependent ATPase activity" evidence=ISO]
[GO:0008134 "transcription factor binding" evidence=ISO]
[GO:0010424 "DNA methylation on cytosine within a CG sequence"
evidence=ISO] [GO:0016514 "SWI/SNF complex" evidence=ISO;IDA]
[GO:0016887 "ATPase activity" evidence=ISO] [GO:0019827 "stem cell
maintenance" evidence=ISO] [GO:0022008 "neurogenesis" evidence=ISO]
[GO:0030198 "extracellular matrix organization" evidence=ISO]
[GO:0030216 "keratinocyte differentiation" evidence=ISO]
[GO:0030308 "negative regulation of cell growth" evidence=ISO]
[GO:0030900 "forebrain development" evidence=ISO] [GO:0030902
"hindbrain development" evidence=ISO] [GO:0030957 "Tat protein
binding" evidence=ISO] [GO:0032403 "protein complex binding"
evidence=IDA] [GO:0035116 "embryonic hindlimb morphogenesis"
evidence=ISO] [GO:0035887 "aortic smooth muscle cell
differentiation" evidence=ISO] [GO:0043044 "ATP-dependent chromatin
remodeling" evidence=IDA] [GO:0043388 "positive regulation of DNA
binding" evidence=ISO] [GO:0043923 "positive regulation by host of
viral transcription" evidence=ISO] [GO:0043966 "histone H3
acetylation" evidence=ISO] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0047485 "protein
N-terminus binding" evidence=ISO] [GO:0048562 "embryonic organ
morphogenesis" evidence=ISO] [GO:0048730 "epidermis morphogenesis"
evidence=ISO] [GO:0050681 "androgen receptor binding" evidence=ISO]
[GO:0051091 "positive regulation of sequence-specific DNA binding
transcription factor activity" evidence=ISO] [GO:0060318
"definitive erythrocyte differentiation" evidence=ISO] [GO:0060347
"heart trabecula formation" evidence=ISO] [GO:0060766 "negative
regulation of androgen receptor signaling pathway" evidence=ISO]
[GO:0070577 "histone acetyl-lysine binding" evidence=ISO]
[GO:0071564 "npBAF complex" evidence=ISO;ISS] [GO:0071565 "nBAF
complex" evidence=ISO;ISS] [GO:0071778 "WINAC complex"
evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR000330 InterPro:IPR001487 InterPro:IPR001650
InterPro:IPR006576 InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271
Pfam:PF00439 Pfam:PF07533 Pfam:PF08880 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297 SMART:SM00490
SMART:SM00592 SMART:SM00951 RGD:621728 GO:GO:0005524 GO:GO:0003714
GO:GO:0007399 GO:GO:0006355 GO:GO:0032403 GO:GO:0003677
GO:GO:0006351 GO:GO:0071564 GO:GO:0016514 GO:GO:0071565
GO:GO:0004386 GO:GO:0006337 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0043044 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359
InterPro:IPR013999 InterPro:IPR014012 InterPro:IPR006562
Pfam:PF07529 SMART:SM00573 PROSITE:PS51204 HOGENOM:HOG000172363
HOVERGEN:HBG056636 EMBL:AJ504723 IPI:IPI00781891 UniGene:Rn.23417
ProteinModelPortal:Q8K1P7 SMR:Q8K1P7 IntAct:Q8K1P7 STRING:Q8K1P7
PhosphoSite:Q8K1P7 PRIDE:Q8K1P7 UCSC:RGD:621728 ArrayExpress:Q8K1P7
Genevestigator:Q8K1P7 Uniprot:Q8K1P7
Length = 1613
Score = 657 (236.3 bits), Expect = 7.4e-97, Sum P(4) = 7.4e-97
Identities = 144/318 (45%), Positives = 200/318 (62%)
Query: 440 TTQVRTKFPFLLKFPLREYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTIAMLAHLAC 499
T +V + ++ L++YQ GL+WLV++Y LNGILADEMGLGKTI TIA++ +L
Sbjct: 739 TERVDKQSALMVNGVLKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIALITYLME 798
Query: 500 EKGIWGPHLIVVPTSVMLNWETEFLKWCPAFKILTYFGS-AKERKFKRQGWLKPNSFHVC 558
K I GP LI+VP S + NW EF KW P+ ++Y GS A R F Q L+ F+V
Sbjct: 799 HKRINGPFLIIVPLSTLSNWAYEFDKWAPSVVKVSYKGSPAARRAFVPQ--LRSGKFNVL 856
Query: 559 ITTYRLIIQDSKVFKRKKWKYLILDEAHLIKNWKSQRWQTL-LNFNSKRRILLTGTPLQN 617
+TTY II+D + + +WKY+I+DE H +KN + Q L ++ + RR+LLTGTPLQN
Sbjct: 857 LTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRLLLTGTPLQN 916
Query: 618 DLMELWSLMHFLMPHIFQSHQEFKDWFCNPISGMVEGQEKVNKE----VVDRLHNVLRPF 673
L ELW+L++FL+P IF+S F+ WF P + M + +N+E ++ RLH VLRPF
Sbjct: 917 KLPELWALLNFLLPTIFKSCSTFEQWFNAPFA-MTGEKVDLNEEETILIIRRLHKVLRPF 975
Query: 674 ILRRLKRDVEKQLPMKQEHVIYCRLSKRQRNLYEDFIASSE--TQATLASANFFG----M 727
+LRRLK++VE QLP K E+VI C +S QR LY A T + G +
Sbjct: 976 LLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVLLTDGSEKDKKGKGGTKTL 1035
Query: 728 ISVIMQLRKVCNHPDLFE 745
++ IMQLRK+CNHP +F+
Sbjct: 1036 MNTIMQLRKICNHPYMFQ 1053
Score = 393 (143.4 bits), Expect = 7.4e-97, Sum P(4) = 7.4e-97
Identities = 94/258 (36%), Positives = 146/258 (56%)
Query: 996 GKLQELAILLRKLKSDGHRALIFTQMTKMLDILEEFISLYGYTYMRLDGSTQPEERQTLM 1055
GK + L +L KL++ H+ L+F QMT ++ I+E++ + G+ Y+RLDG+T+ E+R L+
Sbjct: 1080 GKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLL 1139
Query: 1056 QRFNT-NPKIFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQDRCHRIGQTREV 1114
+ FN + F+F+LSTR+GG+G+NL ADTVI +DSDWNP D QAQDR HRIGQ EV
Sbjct: 1140 KTFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEV 1199
Query: 1115 HIYRLISESTIEENILKKANQKRALDDLVIQSGGYNTEFFKKLDPMELFSGHRTLPMKTM 1174
+ RL + +++EE IL A K +D VIQ+G ++ +K E R +
Sbjct: 1200 RVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFD----QKSSSHE----RRAFLQAIL 1251
Query: 1175 QKEKAINNGNEVSLSNADVEAALKCVEDEAD-YMALKRAEQEEAVDNQEFTEEAVGRPED 1233
+ E+ +EV + V + E+E D +M + + E N + + E+
Sbjct: 1252 EHEEQDEEEDEVP-DDETVNQMIARHEEEFDLFMRMDLDRRREEARNPKRKPRLM---EE 1307
Query: 1234 DEL---VIEDTVRTDEPT 1248
DEL +I+D + T
Sbjct: 1308 DELPSWIIKDDAEVERLT 1325
Score = 80 (33.2 bits), Expect = 7.4e-97, Sum P(4) = 7.4e-97
Identities = 29/106 (27%), Positives = 51/106 (48%)
Query: 25 NISKDVKKFWMKIEKLVLYKHQMEVDVRKKKALD----KQLEFLLGQTERYSSMLAENLV 80
N ++ KK +IEK + + E + +K +D K+L +LL QT+ Y + L E LV
Sbjct: 510 NTEREQKKENERIEKERMRRLMAEDEEGYRKLIDQKKDKRLAYLLQQTDEYVANLTE-LV 568
Query: 81 DSHKPVQQSPMREQPGIQYKEADENGAEEPGVQSKEADEDDAEQHS 126
HK Q + +++ + K+A+ + P + D+ Q S
Sbjct: 569 RQHKAAQVAKEKKKKK-KKKKAENAEGQTPAIGPDGEPLDETSQMS 613
Score = 49 (22.3 bits), Expect = 1.3e-93, Sum P(4) = 1.3e-93
Identities = 15/53 (28%), Positives = 25/53 (47%)
Query: 81 DSHKPVQQSPMREQ-PGIQYKEADENGAEEPGVQSKEADEDDAEQHSGFEPQL 132
D+ K Q E PG Y+ A + +EE G + +E +E++ + P L
Sbjct: 632 DAPKAGQLEAWLEMNPG--YEVAPRSDSEESGSEEEEEEEEEEQPQPAQPPTL 682
Score = 41 (19.5 bits), Expect = 4.1e-60, Sum P(4) = 4.1e-60
Identities = 16/60 (26%), Positives = 27/60 (45%)
Query: 1190 NADVEAALKCVEDEADYMALKRAEQEEAVDNQEFTEEAVGRPEDDELVIEDTVRTDEPTD 1249
N D + + D+ +RA + ++++E EE P DDE V + R +E D
Sbjct: 1223 NVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEQDEEEDEVP-DDETVNQMIARHEEEFD 1281
Score = 39 (18.8 bits), Expect = 4.3e-61, Sum P(3) = 4.3e-61
Identities = 18/85 (21%), Positives = 36/85 (42%)
Query: 1154 FKKLDPMELFSGHRTLPMKTMQKEKAI--NNGNEVSLSNADV-EAALKCVEDEADYMALK 1210
FKK+ E H+ + ++K+ + N +L + + E ++ V +
Sbjct: 1473 FKKIK--ERIRNHKYRSLNDLEKDVMLLCQNAQTFNLEGSLIYEDSI--VLQSVFTSVRQ 1528
Query: 1211 RAEQEEAVDNQEFTEEAVGRPEDDE 1235
+ E+E+ + +E EE G E E
Sbjct: 1529 KIEKEDDSEGEESEEEEEGEEEGSE 1553
Score = 39 (18.8 bits), Expect = 4.3e-61, Sum P(3) = 4.3e-61
Identities = 26/130 (20%), Positives = 53/130 (40%)
Query: 1128 NILKKANQKRALDDLVI---QSGGYNTEFFKKLDPMELFSGHRTLPMKTMQKEKA---IN 1181
N+ KK K+ +D ++ SG +E F +L + + L K + +K I
Sbjct: 1424 NLTKK--MKKIVDAVIKYKDSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIR 1481
Query: 1182 NGNEVSLSNADVEAALKCVEDEADYMALKRAEQEEAVDNQEFTEEAVGRPEDDELVIEDT 1241
N SL++ + + L C + + ++ V FT ++D+ E++
Sbjct: 1482 NHKYRSLNDLEKDVMLLCQNAQTFNLEGSLIYEDSIVLQSVFTSVRQKIEKEDDSEGEES 1541
Query: 1242 VRTDEPTDQG 1251
+E ++G
Sbjct: 1542 EEEEEGEEEG 1551
Score = 37 (18.1 bits), Expect = 7.4e-97, Sum P(4) = 7.4e-97
Identities = 12/48 (25%), Positives = 24/48 (50%)
Query: 1515 RSPDSDSKLSRKRHDGSTELKTCES----IFIDLEQKSASRSKM-GGK 1557
+ DS+ + S + +G E ES + I L +K ++ ++ GG+
Sbjct: 1532 KEDDSEGEESEEEEEGEEEGSESESRSVKVKIKLGRKEKAQDRLKGGR 1579
>UNIPROTKB|E2RJ89 [details] [associations]
symbol:SMARCA4 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001487 InterPro:IPR001650
InterPro:IPR006576 InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271
Pfam:PF00439 Pfam:PF07533 Pfam:PF08880 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297 SMART:SM00490
SMART:SM00592 SMART:SM00951 GO:GO:0005524 GO:GO:0005634
GO:GO:0006355 GO:GO:0003677 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 KO:K11647
GeneTree:ENSGT00550000074659 InterPro:IPR013999 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 SMART:SM00573 PROSITE:PS51204
CTD:6597 EMBL:AAEX03012414 RefSeq:XP_867683.1
Ensembl:ENSCAFT00000027907 GeneID:476710 KEGG:cfa:476710
OMA:HKPMESM Uniprot:E2RJ89
Length = 1614
Score = 657 (236.3 bits), Expect = 7.4e-97, Sum P(4) = 7.4e-97
Identities = 144/318 (45%), Positives = 200/318 (62%)
Query: 440 TTQVRTKFPFLLKFPLREYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTIAMLAHLAC 499
T +V + ++ L++YQ GL+WLV++Y LNGILADEMGLGKTI TIA++ +L
Sbjct: 739 TERVDKQSALMVNGVLKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIALITYLME 798
Query: 500 EKGIWGPHLIVVPTSVMLNWETEFLKWCPAFKILTYFGS-AKERKFKRQGWLKPNSFHVC 558
K I GP LI+VP S + NW EF KW P+ ++Y GS A R F Q L+ F+V
Sbjct: 799 HKRINGPFLIIVPLSTLSNWAYEFDKWAPSVVKVSYKGSPAARRAFVPQ--LRSGKFNVL 856
Query: 559 ITTYRLIIQDSKVFKRKKWKYLILDEAHLIKNWKSQRWQTL-LNFNSKRRILLTGTPLQN 617
+TTY II+D + + +WKY+I+DE H +KN + Q L ++ + RR+LLTGTPLQN
Sbjct: 857 LTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRLLLTGTPLQN 916
Query: 618 DLMELWSLMHFLMPHIFQSHQEFKDWFCNPISGMVEGQEKVNKE----VVDRLHNVLRPF 673
L ELW+L++FL+P IF+S F+ WF P + M + +N+E ++ RLH VLRPF
Sbjct: 917 KLPELWALLNFLLPTIFKSCSTFEQWFNAPFA-MTGEKVDLNEEETILIIRRLHKVLRPF 975
Query: 674 ILRRLKRDVEKQLPMKQEHVIYCRLSKRQRNLYEDFIASSE--TQATLASANFFG----M 727
+LRRLK++VE QLP K E+VI C +S QR LY A T + G +
Sbjct: 976 LLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVLLTDGSEKDKKGKGGTKTL 1035
Query: 728 ISVIMQLRKVCNHPDLFE 745
++ IMQLRK+CNHP +F+
Sbjct: 1036 MNTIMQLRKICNHPYMFQ 1053
Score = 393 (143.4 bits), Expect = 7.4e-97, Sum P(4) = 7.4e-97
Identities = 94/258 (36%), Positives = 146/258 (56%)
Query: 996 GKLQELAILLRKLKSDGHRALIFTQMTKMLDILEEFISLYGYTYMRLDGSTQPEERQTLM 1055
GK + L +L KL++ H+ L+F QMT ++ I+E++ + G+ Y+RLDG+T+ E+R L+
Sbjct: 1080 GKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLL 1139
Query: 1056 QRFNT-NPKIFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQDRCHRIGQTREV 1114
+ FN + F+F+LSTR+GG+G+NL ADTVI +DSDWNP D QAQDR HRIGQ EV
Sbjct: 1140 KTFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEV 1199
Query: 1115 HIYRLISESTIEENILKKANQKRALDDLVIQSGGYNTEFFKKLDPMELFSGHRTLPMKTM 1174
+ RL + +++EE IL A K +D VIQ+G ++ +K E R +
Sbjct: 1200 RVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFD----QKSSSHE----RRAFLQAIL 1251
Query: 1175 QKEKAINNGNEVSLSNADVEAALKCVEDEAD-YMALKRAEQEEAVDNQEFTEEAVGRPED 1233
+ E+ +EV + V + E+E D +M + + E N + + E+
Sbjct: 1252 EHEEQDEEEDEVP-DDETVNQMIARHEEEFDLFMRMDLDRRREEARNPKRKPRLM---EE 1307
Query: 1234 DEL---VIEDTVRTDEPT 1248
DEL +I+D + T
Sbjct: 1308 DELPSWIIKDDAEVERLT 1325
Score = 80 (33.2 bits), Expect = 7.4e-97, Sum P(4) = 7.4e-97
Identities = 29/106 (27%), Positives = 51/106 (48%)
Query: 25 NISKDVKKFWMKIEKLVLYKHQMEVDVRKKKALD----KQLEFLLGQTERYSSMLAENLV 80
N ++ KK +IEK + + E + +K +D K+L +LL QT+ Y + L E LV
Sbjct: 510 NTEREQKKENERIEKERMRRLMAEDEEGYRKLIDQKKDKRLAYLLQQTDEYVANLTE-LV 568
Query: 81 DSHKPVQQSPMREQPGIQYKEADENGAEEPGVQSKEADEDDAEQHS 126
HK Q + +++ + K+A+ + P + D+ Q S
Sbjct: 569 RQHKAAQVAKEKKKKK-KKKKAENAEGQTPAIGPDGEPLDETSQMS 613
Score = 50 (22.7 bits), Expect = 1.0e-93, Sum P(4) = 1.0e-93
Identities = 15/53 (28%), Positives = 25/53 (47%)
Query: 81 DSHKPVQQSPMREQ-PGIQYKEADENGAEEPGVQSKEADEDDAEQHSGFEPQL 132
D+ K Q E PG Y+ A + +EE G + +E +E++ + P L
Sbjct: 632 DAPKAGQLEAWLEMNPG--YEVAPRSDSEESGSEEEEEEEEEEQPQPAQPPNL 682
Score = 41 (19.5 bits), Expect = 4.1e-60, Sum P(4) = 4.1e-60
Identities = 16/60 (26%), Positives = 27/60 (45%)
Query: 1190 NADVEAALKCVEDEADYMALKRAEQEEAVDNQEFTEEAVGRPEDDELVIEDTVRTDEPTD 1249
N D + + D+ +RA + ++++E EE P DDE V + R +E D
Sbjct: 1223 NVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEQDEEEDEVP-DDETVNQMIARHEEEFD 1281
Score = 39 (18.8 bits), Expect = 4.3e-61, Sum P(3) = 4.3e-61
Identities = 18/85 (21%), Positives = 36/85 (42%)
Query: 1154 FKKLDPMELFSGHRTLPMKTMQKEKAI--NNGNEVSLSNADV-EAALKCVEDEADYMALK 1210
FKK+ E H+ + ++K+ + N +L + + E ++ V +
Sbjct: 1474 FKKIK--ERIRNHKYRSLNDLEKDVMLLCQNAQTFNLEGSLIYEDSI--VLQSVFTSVRQ 1529
Query: 1211 RAEQEEAVDNQEFTEEAVGRPEDDE 1235
+ E+E+ + +E EE G E E
Sbjct: 1530 KIEKEDDSEGEESEEEEEGEEEGSE 1554
Score = 38 (18.4 bits), Expect = 5.5e-61, Sum P(3) = 5.5e-61
Identities = 26/131 (19%), Positives = 53/131 (40%)
Query: 1128 NILKKANQKRALDDLV----IQSGGYNTEFFKKLDPMELFSGHRTLPMKTMQKEKA---I 1180
N+ KK K+ +D ++ SG +E F +L + + L K + +K I
Sbjct: 1424 NLTKK--MKKIVDAVIKYKDSSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERI 1481
Query: 1181 NNGNEVSLSNADVEAALKCVEDEADYMALKRAEQEEAVDNQEFTEEAVGRPEDDELVIED 1240
N SL++ + + L C + + ++ V FT ++D+ E+
Sbjct: 1482 RNHKYRSLNDLEKDVMLLCQNAQTFNLEGSLIYEDSIVLQSVFTSVRQKIEKEDDSEGEE 1541
Query: 1241 TVRTDEPTDQG 1251
+ +E ++G
Sbjct: 1542 SEEEEEGEEEG 1552
Score = 37 (18.1 bits), Expect = 7.4e-97, Sum P(4) = 7.4e-97
Identities = 12/59 (20%), Positives = 24/59 (40%)
Query: 1515 RSPDSDSKLSRKRHDGSTELKTCESIFIDLEQKSASRSKMGGKISITAMPVKRVLMIKP 1573
+ DS+ + S + +G E ES + ++ K + K ++ + R KP
Sbjct: 1533 KEDDSEGEESEEEEEGEEEGSESESRSVKVKIKLGRKEKAQDRLKGSRRRPSRGSRAKP 1591
>UNIPROTKB|G3V790 [details] [associations]
symbol:Smarca4 "SWI/SNF related, matrix associated, actin
dependent regulator of chromatin, subfamily a, member 4, isoform
CRA_b" species:10116 "Rattus norvegicus" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0000792 "heterochromatin" evidence=IEA]
[GO:0000902 "cell morphogenesis" evidence=IEA] [GO:0000977 "RNA
polymerase II regulatory region sequence-specific DNA binding"
evidence=IEA] [GO:0001570 "vasculogenesis" evidence=IEA]
[GO:0001832 "blastocyst growth" evidence=IEA] [GO:0001835
"blastocyst hatching" evidence=IEA] [GO:0001889 "liver development"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005719 "nuclear euchromatin"
evidence=IEA] [GO:0005726 "perichromatin fibrils" evidence=IEA]
[GO:0006338 "chromatin remodeling" evidence=IEA] [GO:0006346
"methylation-dependent chromatin silencing" evidence=IEA]
[GO:0007403 "glial cell fate determination" evidence=IEA]
[GO:0008134 "transcription factor binding" evidence=IEA]
[GO:0010424 "DNA methylation on cytosine within a CG sequence"
evidence=IEA] [GO:0019827 "stem cell maintenance" evidence=IEA]
[GO:0030198 "extracellular matrix organization" evidence=IEA]
[GO:0030216 "keratinocyte differentiation" evidence=IEA]
[GO:0030900 "forebrain development" evidence=IEA] [GO:0030902
"hindbrain development" evidence=IEA] [GO:0035116 "embryonic
hindlimb morphogenesis" evidence=IEA] [GO:0035887 "aortic smooth
muscle cell differentiation" evidence=IEA] [GO:0043388 "positive
regulation of DNA binding" evidence=IEA] [GO:0043966 "histone H3
acetylation" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0048562 "embryonic organ morphogenesis" evidence=IEA]
[GO:0048730 "epidermis morphogenesis" evidence=IEA] [GO:0060318
"definitive erythrocyte differentiation" evidence=IEA] [GO:0060347
"heart trabecula formation" evidence=IEA] [GO:0071564 "npBAF
complex" evidence=IEA] [GO:0071565 "nBAF complex" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001487 InterPro:IPR001650
InterPro:IPR006576 InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271
Pfam:PF00439 Pfam:PF07533 Pfam:PF08880 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297 SMART:SM00490
SMART:SM00592 SMART:SM00951 RGD:621728 GO:GO:0005524 GO:GO:0005634
GO:GO:0006355 GO:GO:0003677 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 GeneTree:ENSGT00550000074659
InterPro:IPR013999 InterPro:IPR014012 InterPro:IPR006562
Pfam:PF07529 SMART:SM00573 PROSITE:PS51204 EMBL:CH473993
UniGene:Rn.23417 Ensembl:ENSRNOT00000013165 Uniprot:G3V790
Length = 1614
Score = 657 (236.3 bits), Expect = 7.4e-97, Sum P(4) = 7.4e-97
Identities = 144/318 (45%), Positives = 200/318 (62%)
Query: 440 TTQVRTKFPFLLKFPLREYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTIAMLAHLAC 499
T +V + ++ L++YQ GL+WLV++Y LNGILADEMGLGKTI TIA++ +L
Sbjct: 739 TERVDKQSALMVNGVLKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIALITYLME 798
Query: 500 EKGIWGPHLIVVPTSVMLNWETEFLKWCPAFKILTYFGS-AKERKFKRQGWLKPNSFHVC 558
K I GP LI+VP S + NW EF KW P+ ++Y GS A R F Q L+ F+V
Sbjct: 799 HKRINGPFLIIVPLSTLSNWAYEFDKWAPSVVKVSYKGSPAARRAFVPQ--LRSGKFNVL 856
Query: 559 ITTYRLIIQDSKVFKRKKWKYLILDEAHLIKNWKSQRWQTL-LNFNSKRRILLTGTPLQN 617
+TTY II+D + + +WKY+I+DE H +KN + Q L ++ + RR+LLTGTPLQN
Sbjct: 857 LTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRLLLTGTPLQN 916
Query: 618 DLMELWSLMHFLMPHIFQSHQEFKDWFCNPISGMVEGQEKVNKE----VVDRLHNVLRPF 673
L ELW+L++FL+P IF+S F+ WF P + M + +N+E ++ RLH VLRPF
Sbjct: 917 KLPELWALLNFLLPTIFKSCSTFEQWFNAPFA-MTGEKVDLNEEETILIIRRLHKVLRPF 975
Query: 674 ILRRLKRDVEKQLPMKQEHVIYCRLSKRQRNLYEDFIASSE--TQATLASANFFG----M 727
+LRRLK++VE QLP K E+VI C +S QR LY A T + G +
Sbjct: 976 LLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVLLTDGSEKDKKGKGGTKTL 1035
Query: 728 ISVIMQLRKVCNHPDLFE 745
++ IMQLRK+CNHP +F+
Sbjct: 1036 MNTIMQLRKICNHPYMFQ 1053
Score = 393 (143.4 bits), Expect = 7.4e-97, Sum P(4) = 7.4e-97
Identities = 94/258 (36%), Positives = 146/258 (56%)
Query: 996 GKLQELAILLRKLKSDGHRALIFTQMTKMLDILEEFISLYGYTYMRLDGSTQPEERQTLM 1055
GK + L +L KL++ H+ L+F QMT ++ I+E++ + G+ Y+RLDG+T+ E+R L+
Sbjct: 1080 GKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLL 1139
Query: 1056 QRFNT-NPKIFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQDRCHRIGQTREV 1114
+ FN + F+F+LSTR+GG+G+NL ADTVI +DSDWNP D QAQDR HRIGQ EV
Sbjct: 1140 KTFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEV 1199
Query: 1115 HIYRLISESTIEENILKKANQKRALDDLVIQSGGYNTEFFKKLDPMELFSGHRTLPMKTM 1174
+ RL + +++EE IL A K +D VIQ+G ++ +K E R +
Sbjct: 1200 RVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFD----QKSSSHE----RRAFLQAIL 1251
Query: 1175 QKEKAINNGNEVSLSNADVEAALKCVEDEAD-YMALKRAEQEEAVDNQEFTEEAVGRPED 1233
+ E+ +EV + V + E+E D +M + + E N + + E+
Sbjct: 1252 EHEEQDEEEDEVP-DDETVNQMIARHEEEFDLFMRMDLDRRREEARNPKRKPRLM---EE 1307
Query: 1234 DEL---VIEDTVRTDEPT 1248
DEL +I+D + T
Sbjct: 1308 DELPSWIIKDDAEVERLT 1325
Score = 80 (33.2 bits), Expect = 7.4e-97, Sum P(4) = 7.4e-97
Identities = 29/106 (27%), Positives = 51/106 (48%)
Query: 25 NISKDVKKFWMKIEKLVLYKHQMEVDVRKKKALD----KQLEFLLGQTERYSSMLAENLV 80
N ++ KK +IEK + + E + +K +D K+L +LL QT+ Y + L E LV
Sbjct: 510 NTEREQKKENERIEKERMRRLMAEDEEGYRKLIDQKKDKRLAYLLQQTDEYVANLTE-LV 568
Query: 81 DSHKPVQQSPMREQPGIQYKEADENGAEEPGVQSKEADEDDAEQHS 126
HK Q + +++ + K+A+ + P + D+ Q S
Sbjct: 569 RQHKAAQVAKEKKKKK-KKKKAENAEGQTPAIGPDGEPLDETSQMS 613
Score = 49 (22.3 bits), Expect = 1.3e-93, Sum P(4) = 1.3e-93
Identities = 15/53 (28%), Positives = 25/53 (47%)
Query: 81 DSHKPVQQSPMREQ-PGIQYKEADENGAEEPGVQSKEADEDDAEQHSGFEPQL 132
D+ K Q E PG Y+ A + +EE G + +E +E++ + P L
Sbjct: 632 DAPKAGQLEAWLEMNPG--YEVAPRSDSEESGSEEEEEEEEEEQPQPAQPPTL 682
Score = 41 (19.5 bits), Expect = 4.1e-60, Sum P(4) = 4.1e-60
Identities = 16/60 (26%), Positives = 27/60 (45%)
Query: 1190 NADVEAALKCVEDEADYMALKRAEQEEAVDNQEFTEEAVGRPEDDELVIEDTVRTDEPTD 1249
N D + + D+ +RA + ++++E EE P DDE V + R +E D
Sbjct: 1223 NVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEQDEEEDEVP-DDETVNQMIARHEEEFD 1281
Score = 39 (18.8 bits), Expect = 4.3e-61, Sum P(3) = 4.3e-61
Identities = 18/85 (21%), Positives = 36/85 (42%)
Query: 1154 FKKLDPMELFSGHRTLPMKTMQKEKAI--NNGNEVSLSNADV-EAALKCVEDEADYMALK 1210
FKK+ E H+ + ++K+ + N +L + + E ++ V +
Sbjct: 1474 FKKIK--ERIRNHKYRSLNDLEKDVMLLCQNAQTFNLEGSLIYEDSI--VLQSVFTSVRQ 1529
Query: 1211 RAEQEEAVDNQEFTEEAVGRPEDDE 1235
+ E+E+ + +E EE G E E
Sbjct: 1530 KIEKEDDSEGEESEEEEEGEEEGSE 1554
Score = 38 (18.4 bits), Expect = 5.5e-61, Sum P(3) = 5.5e-61
Identities = 26/131 (19%), Positives = 53/131 (40%)
Query: 1128 NILKKANQKRALDDLV----IQSGGYNTEFFKKLDPMELFSGHRTLPMKTMQKEKA---I 1180
N+ KK K+ +D ++ SG +E F +L + + L K + +K I
Sbjct: 1424 NLTKK--MKKIVDAVIKYKDSSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERI 1481
Query: 1181 NNGNEVSLSNADVEAALKCVEDEADYMALKRAEQEEAVDNQEFTEEAVGRPEDDELVIED 1240
N SL++ + + L C + + ++ V FT ++D+ E+
Sbjct: 1482 RNHKYRSLNDLEKDVMLLCQNAQTFNLEGSLIYEDSIVLQSVFTSVRQKIEKEDDSEGEE 1541
Query: 1241 TVRTDEPTDQG 1251
+ +E ++G
Sbjct: 1542 SEEEEEGEEEG 1552
Score = 37 (18.1 bits), Expect = 7.4e-97, Sum P(4) = 7.4e-97
Identities = 12/48 (25%), Positives = 24/48 (50%)
Query: 1515 RSPDSDSKLSRKRHDGSTELKTCES----IFIDLEQKSASRSKM-GGK 1557
+ DS+ + S + +G E ES + I L +K ++ ++ GG+
Sbjct: 1533 KEDDSEGEESEEEEEGEEEGSESESRSVKVKIKLGRKEKAQDRLKGGR 1580
>UNIPROTKB|F1M6Y4 [details] [associations]
symbol:Smarca4 "Transcription activator BRG1" species:10116
"Rattus norvegicus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0000792 "heterochromatin" evidence=IEA] [GO:0000902 "cell
morphogenesis" evidence=IEA] [GO:0000977 "RNA polymerase II
regulatory region sequence-specific DNA binding" evidence=IEA]
[GO:0001570 "vasculogenesis" evidence=IEA] [GO:0001832 "blastocyst
growth" evidence=IEA] [GO:0001835 "blastocyst hatching"
evidence=IEA] [GO:0001889 "liver development" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005719 "nuclear euchromatin" evidence=IEA] [GO:0005726
"perichromatin fibrils" evidence=IEA] [GO:0006338 "chromatin
remodeling" evidence=IEA] [GO:0006346 "methylation-dependent
chromatin silencing" evidence=IEA] [GO:0007403 "glial cell fate
determination" evidence=IEA] [GO:0008134 "transcription factor
binding" evidence=IEA] [GO:0010424 "DNA methylation on cytosine
within a CG sequence" evidence=IEA] [GO:0019827 "stem cell
maintenance" evidence=IEA] [GO:0030198 "extracellular matrix
organization" evidence=IEA] [GO:0030216 "keratinocyte
differentiation" evidence=IEA] [GO:0030900 "forebrain development"
evidence=IEA] [GO:0030902 "hindbrain development" evidence=IEA]
[GO:0035116 "embryonic hindlimb morphogenesis" evidence=IEA]
[GO:0035887 "aortic smooth muscle cell differentiation"
evidence=IEA] [GO:0043388 "positive regulation of DNA binding"
evidence=IEA] [GO:0043966 "histone H3 acetylation" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0048562 "embryonic organ
morphogenesis" evidence=IEA] [GO:0048730 "epidermis morphogenesis"
evidence=IEA] [GO:0060318 "definitive erythrocyte differentiation"
evidence=IEA] [GO:0060347 "heart trabecula formation" evidence=IEA]
[GO:0071564 "npBAF complex" evidence=IEA] [GO:0071565 "nBAF
complex" evidence=IEA] InterPro:IPR000330 InterPro:IPR001487
InterPro:IPR001650 InterPro:IPR006576 InterPro:IPR014978
Pfam:PF00176 Pfam:PF00271 Pfam:PF00439 Pfam:PF07533 Pfam:PF08880
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297
SMART:SM00490 SMART:SM00592 SMART:SM00951 RGD:621728 GO:GO:0005524
GO:GO:0030216 GO:GO:0045944 GO:GO:0030198 GO:GO:0030900
GO:GO:0001889 GO:GO:0003682 GO:GO:0006338 GO:GO:0000122
GO:GO:0071564 GO:GO:0071565 GO:GO:0000902 GO:GO:0004386
GO:GO:0001570 GO:GO:0035116 GO:GO:0005719 GO:GO:0030902
GO:GO:0048730 GO:GO:0000977 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0019827 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 GO:GO:0000792 GO:GO:0060347
GO:GO:0043966 GO:GO:0043388 InterPro:IPR013999 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 SMART:SM00573 PROSITE:PS51204
GO:GO:0001835 GO:GO:0007403 GO:GO:0006346 GO:GO:0010424
GO:GO:0060318 GO:GO:0048562 GO:GO:0001832 GO:GO:0005726
GO:GO:0035887 IPI:IPI00951882 Ensembl:ENSRNOT00000060927
ArrayExpress:F1M6Y4 Uniprot:F1M6Y4
Length = 1618
Score = 657 (236.3 bits), Expect = 7.6e-97, Sum P(4) = 7.6e-97
Identities = 144/318 (45%), Positives = 200/318 (62%)
Query: 440 TTQVRTKFPFLLKFPLREYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTIAMLAHLAC 499
T +V + ++ L++YQ GL+WLV++Y LNGILADEMGLGKTI TIA++ +L
Sbjct: 739 TERVDKQSALMVNGVLKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIALITYLME 798
Query: 500 EKGIWGPHLIVVPTSVMLNWETEFLKWCPAFKILTYFGS-AKERKFKRQGWLKPNSFHVC 558
K I GP LI+VP S + NW EF KW P+ ++Y GS A R F Q L+ F+V
Sbjct: 799 HKRINGPFLIIVPLSTLSNWAYEFDKWAPSVVKVSYKGSPAARRAFVPQ--LRSGKFNVL 856
Query: 559 ITTYRLIIQDSKVFKRKKWKYLILDEAHLIKNWKSQRWQTL-LNFNSKRRILLTGTPLQN 617
+TTY II+D + + +WKY+I+DE H +KN + Q L ++ + RR+LLTGTPLQN
Sbjct: 857 LTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRLLLTGTPLQN 916
Query: 618 DLMELWSLMHFLMPHIFQSHQEFKDWFCNPISGMVEGQEKVNKE----VVDRLHNVLRPF 673
L ELW+L++FL+P IF+S F+ WF P + M + +N+E ++ RLH VLRPF
Sbjct: 917 KLPELWALLNFLLPTIFKSCSTFEQWFNAPFA-MTGEKVDLNEEETILIIRRLHKVLRPF 975
Query: 674 ILRRLKRDVEKQLPMKQEHVIYCRLSKRQRNLYEDFIASSE--TQATLASANFFG----M 727
+LRRLK++VE QLP K E+VI C +S QR LY A T + G +
Sbjct: 976 LLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVLLTDGSEKDKKGKGGTKTL 1035
Query: 728 ISVIMQLRKVCNHPDLFE 745
++ IMQLRK+CNHP +F+
Sbjct: 1036 MNTIMQLRKICNHPYMFQ 1053
Score = 393 (143.4 bits), Expect = 7.6e-97, Sum P(4) = 7.6e-97
Identities = 94/258 (36%), Positives = 146/258 (56%)
Query: 996 GKLQELAILLRKLKSDGHRALIFTQMTKMLDILEEFISLYGYTYMRLDGSTQPEERQTLM 1055
GK + L +L KL++ H+ L+F QMT ++ I+E++ + G+ Y+RLDG+T+ E+R L+
Sbjct: 1080 GKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLL 1139
Query: 1056 QRFNT-NPKIFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQDRCHRIGQTREV 1114
+ FN + F+F+LSTR+GG+G+NL ADTVI +DSDWNP D QAQDR HRIGQ EV
Sbjct: 1140 KTFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEV 1199
Query: 1115 HIYRLISESTIEENILKKANQKRALDDLVIQSGGYNTEFFKKLDPMELFSGHRTLPMKTM 1174
+ RL + +++EE IL A K +D VIQ+G ++ +K E R +
Sbjct: 1200 RVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFD----QKSSSHE----RRAFLQAIL 1251
Query: 1175 QKEKAINNGNEVSLSNADVEAALKCVEDEAD-YMALKRAEQEEAVDNQEFTEEAVGRPED 1233
+ E+ +EV + V + E+E D +M + + E N + + E+
Sbjct: 1252 EHEEQDEEEDEVP-DDETVNQMIARHEEEFDLFMRMDLDRRREEARNPKRKPRLM---EE 1307
Query: 1234 DEL---VIEDTVRTDEPT 1248
DEL +I+D + T
Sbjct: 1308 DELPSWIIKDDAEVERLT 1325
Score = 80 (33.2 bits), Expect = 7.6e-97, Sum P(4) = 7.6e-97
Identities = 29/106 (27%), Positives = 51/106 (48%)
Query: 25 NISKDVKKFWMKIEKLVLYKHQMEVDVRKKKALD----KQLEFLLGQTERYSSMLAENLV 80
N ++ KK +IEK + + E + +K +D K+L +LL QT+ Y + L E LV
Sbjct: 510 NTEREQKKENERIEKERMRRLMAEDEEGYRKLIDQKKDKRLAYLLQQTDEYVANLTE-LV 568
Query: 81 DSHKPVQQSPMREQPGIQYKEADENGAEEPGVQSKEADEDDAEQHS 126
HK Q + +++ + K+A+ + P + D+ Q S
Sbjct: 569 RQHKAAQVAKEKKKKK-KKKKAENAEGQTPAIGPDGEPLDETSQMS 613
Score = 49 (22.3 bits), Expect = 1.3e-93, Sum P(4) = 1.3e-93
Identities = 15/53 (28%), Positives = 25/53 (47%)
Query: 81 DSHKPVQQSPMREQ-PGIQYKEADENGAEEPGVQSKEADEDDAEQHSGFEPQL 132
D+ K Q E PG Y+ A + +EE G + +E +E++ + P L
Sbjct: 632 DAPKAGQLEAWLEMNPG--YEVAPRSDSEESGSEEEEEEEEEEQPQPAQPPTL 682
Score = 41 (19.5 bits), Expect = 4.2e-60, Sum P(4) = 4.2e-60
Identities = 16/60 (26%), Positives = 27/60 (45%)
Query: 1190 NADVEAALKCVEDEADYMALKRAEQEEAVDNQEFTEEAVGRPEDDELVIEDTVRTDEPTD 1249
N D + + D+ +RA + ++++E EE P DDE V + R +E D
Sbjct: 1223 NVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEQDEEEDEVP-DDETVNQMIARHEEEFD 1281
Score = 39 (18.8 bits), Expect = 4.4e-61, Sum P(3) = 4.4e-61
Identities = 18/85 (21%), Positives = 36/85 (42%)
Query: 1154 FKKLDPMELFSGHRTLPMKTMQKEKAI--NNGNEVSLSNADV-EAALKCVEDEADYMALK 1210
FKK+ E H+ + ++K+ + N +L + + E ++ V +
Sbjct: 1478 FKKIK--ERIRNHKYRSLNDLEKDVMLLCQNAQTFNLEGSLIYEDSI--VLQSVFTSVRQ 1533
Query: 1211 RAEQEEAVDNQEFTEEAVGRPEDDE 1235
+ E+E+ + +E EE G E E
Sbjct: 1534 KIEKEDDSEGEESEEEEEGEEEGSE 1558
Score = 38 (18.4 bits), Expect = 5.6e-61, Sum P(3) = 5.6e-61
Identities = 26/131 (19%), Positives = 53/131 (40%)
Query: 1128 NILKKANQKRALDDLV----IQSGGYNTEFFKKLDPMELFSGHRTLPMKTMQKEKA---I 1180
N+ KK K+ +D ++ SG +E F +L + + L K + +K I
Sbjct: 1428 NLTKK--MKKIVDAVIKYKDSSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERI 1485
Query: 1181 NNGNEVSLSNADVEAALKCVEDEADYMALKRAEQEEAVDNQEFTEEAVGRPEDDELVIED 1240
N SL++ + + L C + + ++ V FT ++D+ E+
Sbjct: 1486 RNHKYRSLNDLEKDVMLLCQNAQTFNLEGSLIYEDSIVLQSVFTSVRQKIEKEDDSEGEE 1545
Query: 1241 TVRTDEPTDQG 1251
+ +E ++G
Sbjct: 1546 SEEEEEGEEEG 1556
Score = 37 (18.1 bits), Expect = 7.6e-97, Sum P(4) = 7.6e-97
Identities = 12/48 (25%), Positives = 24/48 (50%)
Query: 1515 RSPDSDSKLSRKRHDGSTELKTCES----IFIDLEQKSASRSKM-GGK 1557
+ DS+ + S + +G E ES + I L +K ++ ++ GG+
Sbjct: 1537 KEDDSEGEESEEEEEGEEEGSESESRSVKVKIKLGRKEKAQDRLKGGR 1584
>UNIPROTKB|F1SJG5 [details] [associations]
symbol:SMARCA2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071778 "WINAC complex" evidence=IEA] [GO:0071565 "nBAF
complex" evidence=IEA] [GO:0071564 "npBAF complex" evidence=IEA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0045111 "intermediate filament cytoskeleton"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0035887 "aortic smooth muscle cell
differentiation" evidence=IEA] [GO:0030308 "negative regulation of
cell growth" evidence=IEA] [GO:0016514 "SWI/SNF complex"
evidence=IEA] [GO:0008285 "negative regulation of cell
proliferation" evidence=IEA] [GO:0001105 "RNA polymerase II
transcription coactivator activity" evidence=IEA] [GO:0000790
"nuclear chromatin" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001487 InterPro:IPR001650
InterPro:IPR006576 InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271
Pfam:PF00439 Pfam:PF07533 Pfam:PF08880 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297 SMART:SM00490
SMART:SM00592 SMART:SM00951 GO:GO:0005524 GO:GO:0045892
GO:GO:0008285 GO:GO:0030308 GO:GO:0045944 GO:GO:0044212
GO:GO:0045111 GO:GO:0000790 GO:GO:0071564 GO:GO:0016514
GO:GO:0071565 GO:GO:0004386 GO:GO:0001105 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 GO:GO:0071778
GeneTree:ENSGT00550000074659 OMA:PQEGMHQ GO:GO:0035887
EMBL:CT998562 EMBL:CU062411 Ensembl:ENSSSCT00000005766
Uniprot:F1SJG5
Length = 1556
Score = 648 (233.2 bits), Expect = 7.7e-97, Sum P(4) = 7.7e-97
Identities = 140/316 (44%), Positives = 198/316 (62%)
Query: 442 QVRTKFPFLLKFPLREYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTIAMLAHLACEK 501
+V + L+ L+ YQ GL+W+V++Y LNGILADEMGLGKTI TIA++ +L K
Sbjct: 695 RVEKQSALLINGTLKHYQLQGLEWMVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHK 754
Query: 502 GIWGPHLIVVPTSVMLNWETEFLKWCPAFKILTYFGS-AKERKFKRQGWLKPNSFHVCIT 560
+ GP+LI+VP S + NW EF KW P+ ++Y G+ A R Q L+ F+V +T
Sbjct: 755 RLNGPYLIIVPLSTLSNWTYEFDKWAPSVVKISYKGTPAMRRSLVPQ--LRSGKFNVLLT 812
Query: 561 TYRLIIQDSKVFKRKKWKYLILDEAHLIKNWKSQRWQTL-LNFNSKRRILLTGTPLQNDL 619
TY II+D + + +WKY+I+DE H +KN + Q L ++ + RRILLTGTPLQN L
Sbjct: 813 TYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRILLTGTPLQNKL 872
Query: 620 MELWSLMHFLMPHIFQSHQEFKDWFCNPISGMVEGQEKVNKE----VVDRLHNVLRPFIL 675
ELW+L++FL+P IF+S F+ WF P + M + +N+E ++ RLH VLRPF+L
Sbjct: 873 PELWALLNFLLPTIFKSCSTFEQWFNAPFA-MTGERVDLNEEETILIIRRLHKVLRPFLL 931
Query: 676 RRLKRDVEKQLPMKQEHVIYCRLSKRQRNLYEDFIASSE--TQATLASANFFG----MIS 729
RRLK++VE QLP K E+VI C +S Q+ LY A T + G +++
Sbjct: 932 RRLKKEVESQLPEKVEYVIKCDMSALQKILYRHMQAKGILLTDGSEKDKKGKGGAKTLMN 991
Query: 730 VIMQLRKVCNHPDLFE 745
IMQLRK+CNHP +F+
Sbjct: 992 TIMQLRKICNHPYMFQ 1007
Score = 392 (143.0 bits), Expect = 7.7e-97, Sum P(4) = 7.7e-97
Identities = 73/156 (46%), Positives = 109/156 (69%)
Query: 996 GKLQELAILLRKLKSDGHRALIFTQMTKMLDILEEFISLYGYTYMRLDGSTQPEERQTLM 1055
GK + L +L KL++ HR L+F QMT ++ I+E++ + + Y+RLDG+T+ E+R L+
Sbjct: 1034 GKFELLDRILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRLDGTTKSEDRAALL 1093
Query: 1056 QRFNT-NPKIFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQDRCHRIGQTREV 1114
++FN + F+F+LSTR+GG+G+NL ADTV+ +DSDWNP D QAQDR HRIGQ EV
Sbjct: 1094 KKFNEPGSQYFIFLLSTRAGGLGLNLQAADTVVIFDSDWNPHQDLQAQDRAHRIGQQNEV 1153
Query: 1115 HIYRLISESTIEENILKKANQKRALDDLVIQSGGYN 1150
+ RL + +++EE IL A K +D VIQ+G ++
Sbjct: 1154 RVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFD 1189
Score = 80 (33.2 bits), Expect = 7.7e-97, Sum P(4) = 7.7e-97
Identities = 25/72 (34%), Positives = 40/72 (55%)
Query: 51 VRKKKALDKQLEFLLGQTERYSSMLAENLVDSHKPVQQSPMREQPGIQYKEADEN--GAE 108
+ +KK D++L +LL QT+ Y + L NLV HK Q + +++ + K+A+EN G E
Sbjct: 502 IDQKK--DRRLAYLLQQTDEYVANLT-NLVWEHKQAQAAKEKKKRRRRKKKAEENAEGGE 558
Query: 109 EP-GVQSKEADE 119
G + DE
Sbjct: 559 SALGPDGEPIDE 570
Score = 46 (21.3 bits), Expect = 7.7e-97, Sum P(4) = 7.7e-97
Identities = 19/102 (18%), Positives = 45/102 (44%)
Query: 1154 FKKLDPMELFSGHRTLPMKTMQKEKAI--NNGNEVSLSNADVEAALKCVEDEADYMALKR 1211
FKK+ E H+ + ++K+ + +N +L + + ++ K
Sbjct: 1415 FKKIK--ERIRNHKYRSLGDLEKDVMLLCHNAQTFNLEGSQIYEDSIVLQSVFKSARQKI 1472
Query: 1212 AEQEEAVD--NQEFTEEAVGRPEDDELVIEDTVRTDEPTDQG 1251
A++EE+ D N+E EE E + ++ ++ ++ ++G
Sbjct: 1473 AKEEESEDESNEEEEEEDEEESESEAKSVKVKIKLNKKDEKG 1514
Score = 46 (21.3 bits), Expect = 4.0e-96, Sum P(5) = 4.0e-96
Identities = 14/47 (29%), Positives = 24/47 (51%)
Query: 1442 TSESKAVKEEPSVEPMSIDDDFYDEDATFSDAMSPPSTSQKKRKKAE 1488
++ K KEE S + + +++ DE+ + S+A S K KK E
Sbjct: 1467 SARQKIAKEEESEDESNEEEEEEDEEESESEAKSV-KVKIKLNKKDE 1512
Score = 44 (20.5 bits), Expect = 6.5e-96, Sum P(5) = 6.5e-96
Identities = 8/33 (24%), Positives = 19/33 (57%)
Query: 1928 KDANLRFDLIQEAWLEDMDGGRLSCMDQDLSLE 1960
+D + L ++ WL ++ G L M++++ L+
Sbjct: 1296 RDVDYSDALTEKQWLRAIEDGNLEEMEEEVRLK 1328
Score = 40 (19.1 bits), Expect = 4.0e-96, Sum P(5) = 4.0e-96
Identities = 15/60 (25%), Positives = 27/60 (45%)
Query: 1190 NADVEAALKCVEDEADYMALKRAEQEEAVDNQEFTEEAVGRPEDDELVIEDTVRTDEPTD 1249
N D + + D+ +RA + ++++E EE P DDE + + R +E D
Sbjct: 1177 NVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEENEEEDEVP-DDETLNQMIARREEEFD 1235
Score = 38 (18.4 bits), Expect = 2.7e-95, Sum P(5) = 2.7e-95
Identities = 9/31 (29%), Positives = 15/31 (48%)
Query: 1743 KSTREPARRVKFTNLGQSSKLLSAALHDANS 1773
K +E R K+ +LG K + H+A +
Sbjct: 1416 KKIKERIRNHKYRSLGDLEKDVMLLCHNAQT 1446
Score = 38 (18.4 bits), Expect = 9.5e-92, Sum P(5) = 9.5e-92
Identities = 10/38 (26%), Positives = 18/38 (47%)
Query: 95 PGIQYKEADENGAEEPGVQSKEADEDDAEQHSGFEPQL 132
PG Y+ A + +EE +E DE++ E ++
Sbjct: 609 PG--YEVAPRSDSEESDSDYEEEDEEEESSRQETEEKI 644
>UNIPROTKB|P51532 [details] [associations]
symbol:SMARCA4 "Transcription activator BRG1" species:9606
"Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0047485 "protein N-terminus binding" evidence=IPI] [GO:0016514
"SWI/SNF complex" evidence=IDA] [GO:0003714 "transcription
corepressor activity" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0071564 "npBAF complex" evidence=ISS;IDA]
[GO:0071565 "nBAF complex" evidence=ISS] [GO:0006338 "chromatin
remodeling" evidence=IC;IDA] [GO:0001105 "RNA polymerase II
transcription coactivator activity" evidence=IDA] [GO:0000790
"nuclear chromatin" evidence=IDA] [GO:0071778 "WINAC complex"
evidence=IDA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IMP;IDA] [GO:0030308 "negative regulation
of cell growth" evidence=IMP] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IGI;IDA]
[GO:0060766 "negative regulation of androgen receptor signaling
pathway" evidence=IMP] [GO:0050681 "androgen receptor binding"
evidence=IPI] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IGI] [GO:0045749 "negative regulation of S phase of
mitotic cell cycle" evidence=TAS] [GO:0070577 "histone
acetyl-lysine binding" evidence=IDA] [GO:0051091 "positive
regulation of sequence-specific DNA binding transcription factor
activity" evidence=IDA] [GO:0002039 "p53 binding" evidence=IPI]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=TAS] [GO:0003713 "transcription
coactivator activity" evidence=IMP;NAS] [GO:0006357 "regulation of
transcription from RNA polymerase II promoter" evidence=NAS]
[GO:0006337 "nucleosome disassembly" evidence=IDA] [GO:0043923
"positive regulation by host of viral transcription" evidence=IMP]
[GO:0030957 "Tat protein binding" evidence=IPI] [GO:0003407 "neural
retina development" evidence=IEP] [GO:0045893 "positive regulation
of transcription, DNA-dependent" evidence=IMP] InterPro:IPR000330
InterPro:IPR001487 InterPro:IPR001650 InterPro:IPR006576
InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271 Pfam:PF00439
Pfam:PF07533 Pfam:PF08880 PRINTS:PR00503 PROSITE:PS50014
PROSITE:PS51194 SMART:SM00297 SMART:SM00490 SMART:SM00592
SMART:SM00951 GO:GO:0005524 GO:GO:0003714 GO:GO:0007399
GO:GO:0051091 GO:GO:0030308 GO:GO:0003677 GO:GO:0006338
GO:GO:0000122 GO:GO:0000790 GO:GO:0071564 GO:GO:0016514
GO:GO:0003407 GO:GO:0071565 GO:GO:0004386 EMBL:CH471106
GO:GO:0001105 GO:GO:0045749 Orphanet:1465 GO:GO:0006337
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633 GO:GO:0070577
InterPro:IPR018359 GO:GO:0071778 KO:K11647 InterPro:IPR013999
InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529 SMART:SM00573
PROSITE:PS51204 EMBL:AC011442 GO:GO:0008094 GO:GO:0060766
GO:GO:0043923 EMBL:AC011485 HOGENOM:HOG000172363 HOVERGEN:HBG056636
CTD:6597 EMBL:U29175 EMBL:D26156 EMBL:AF254822 EMBL:EU430756
EMBL:EU430757 EMBL:EU430758 EMBL:EU430759 EMBL:AC006127
IPI:IPI00293426 IPI:IPI00900285 IPI:IPI00900328 IPI:IPI00900338
IPI:IPI01016040 PIR:S45252 RefSeq:NP_001122316.1
RefSeq:NP_001122317.1 RefSeq:NP_001122318.1 RefSeq:NP_001122319.1
RefSeq:NP_001122320.1 RefSeq:NP_003063.2 UniGene:Hs.327527 PDB:2GRC
PDB:2H60 PDB:3UVD PDBsum:2GRC PDBsum:2H60 PDBsum:3UVD
ProteinModelPortal:P51532 SMR:P51532 DIP:DIP-24249N IntAct:P51532
MINT:MINT-204078 STRING:P51532 PhosphoSite:P51532 DMDM:116242792
PaxDb:P51532 PRIDE:P51532 Ensembl:ENST00000344626
Ensembl:ENST00000413806 Ensembl:ENST00000429416
Ensembl:ENST00000444061 Ensembl:ENST00000450717
Ensembl:ENST00000541122 GeneID:6597 KEGG:hsa:6597 UCSC:uc002mqf.4
GeneCards:GC19P011071 HGNC:HGNC:11100 HPA:CAB004208 MIM:603254
MIM:613325 MIM:614609 neXtProt:NX_P51532 Orphanet:231108
PharmGKB:PA35950 ChiTaRS:SMARCA4 EvolutionaryTrace:P51532
GenomeRNAi:6597 NextBio:25661 ArrayExpress:P51532 Bgee:P51532
CleanEx:HS_SMARCA4 Genevestigator:P51532 GermOnline:ENSG00000127616
Uniprot:P51532
Length = 1647
Score = 657 (236.3 bits), Expect = 1.1e-96, Sum P(4) = 1.1e-96
Identities = 144/318 (45%), Positives = 200/318 (62%)
Query: 440 TTQVRTKFPFLLKFPLREYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTIAMLAHLAC 499
T +V + ++ L++YQ GL+WLV++Y LNGILADEMGLGKTI TIA++ +L
Sbjct: 739 TERVDKQSALMVNGVLKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIALITYLME 798
Query: 500 EKGIWGPHLIVVPTSVMLNWETEFLKWCPAFKILTYFGS-AKERKFKRQGWLKPNSFHVC 558
K I GP LI+VP S + NW EF KW P+ ++Y GS A R F Q L+ F+V
Sbjct: 799 HKRINGPFLIIVPLSTLSNWAYEFDKWAPSVVKVSYKGSPAARRAFVPQ--LRSGKFNVL 856
Query: 559 ITTYRLIIQDSKVFKRKKWKYLILDEAHLIKNWKSQRWQTL-LNFNSKRRILLTGTPLQN 617
+TTY II+D + + +WKY+I+DE H +KN + Q L ++ + RR+LLTGTPLQN
Sbjct: 857 LTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRLLLTGTPLQN 916
Query: 618 DLMELWSLMHFLMPHIFQSHQEFKDWFCNPISGMVEGQEKVNKE----VVDRLHNVLRPF 673
L ELW+L++FL+P IF+S F+ WF P + M + +N+E ++ RLH VLRPF
Sbjct: 917 KLPELWALLNFLLPTIFKSCSTFEQWFNAPFA-MTGEKVDLNEEETILIIRRLHKVLRPF 975
Query: 674 ILRRLKRDVEKQLPMKQEHVIYCRLSKRQRNLYEDFIASSE--TQATLASANFFG----M 727
+LRRLK++VE QLP K E+VI C +S QR LY A T + G +
Sbjct: 976 LLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVLLTDGSEKDKKGKGGTKTL 1035
Query: 728 ISVIMQLRKVCNHPDLFE 745
++ IMQLRK+CNHP +F+
Sbjct: 1036 MNTIMQLRKICNHPYMFQ 1053
Score = 390 (142.3 bits), Expect = 1.1e-96, Sum P(4) = 1.1e-96
Identities = 74/156 (47%), Positives = 109/156 (69%)
Query: 996 GKLQELAILLRKLKSDGHRALIFTQMTKMLDILEEFISLYGYTYMRLDGSTQPEERQTLM 1055
GK + L +L KL++ H+ L+F QMT ++ I+E++ + G+ Y+RLDG+T+ E+R L+
Sbjct: 1080 GKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLL 1139
Query: 1056 QRFNT-NPKIFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQDRCHRIGQTREV 1114
+ FN + F+F+LSTR+GG+G+NL ADTVI +DSDWNP D QAQDR HRIGQ EV
Sbjct: 1140 KTFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEV 1199
Query: 1115 HIYRLISESTIEENILKKANQKRALDDLVIQSGGYN 1150
+ RL + +++EE IL A K +D VIQ+G ++
Sbjct: 1200 RVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFD 1235
Score = 80 (33.2 bits), Expect = 1.1e-96, Sum P(4) = 1.1e-96
Identities = 29/106 (27%), Positives = 51/106 (48%)
Query: 25 NISKDVKKFWMKIEKLVLYKHQMEVDVRKKKALD----KQLEFLLGQTERYSSMLAENLV 80
N ++ KK +IEK + + E + +K +D K+L +LL QT+ Y + L E LV
Sbjct: 510 NTEREQKKENERIEKERMRRLMAEDEEGYRKLIDQKKDKRLAYLLQQTDEYVANLTE-LV 568
Query: 81 DSHKPVQQSPMREQPGIQYKEADENGAEEPGVQSKEADEDDAEQHS 126
HK Q + +++ + K+A+ + P + D+ Q S
Sbjct: 569 RQHKAAQVAKEKKKKK-KKKKAENAEGQTPAIGPDGEPLDETSQMS 613
Score = 51 (23.0 bits), Expect = 1.2e-93, Sum P(4) = 1.2e-93
Identities = 15/53 (28%), Positives = 26/53 (49%)
Query: 81 DSHKPVQQSPMREQ-PGIQYKEADENGAEEPGVQSKEADEDDAEQHSGFEPQL 132
D+ K Q E PG Y+ A + +EE G + +E +E++ + + P L
Sbjct: 632 DAPKAGQLEAWLEMNPG--YEVAPRSDSEESGSEEEEEEEEEEQPQAAQPPTL 682
Score = 39 (18.8 bits), Expect = 1.1e-96, Sum P(4) = 1.1e-96
Identities = 18/85 (21%), Positives = 36/85 (42%)
Query: 1154 FKKLDPMELFSGHRTLPMKTMQKEKAI--NNGNEVSLSNADV-EAALKCVEDEADYMALK 1210
FKK+ E H+ + ++K+ + N +L + + E ++ V +
Sbjct: 1507 FKKIK--ERIRNHKYRSLNDLEKDVMLLCQNAQTFNLEGSLIYEDSI--VLQSVFTSVRQ 1562
Query: 1211 RAEQEEAVDNQEFTEEAVGRPEDDE 1235
+ E+E+ + +E EE G E E
Sbjct: 1563 KIEKEDDSEGEESEEEEEGEEEGSE 1587
Score = 38 (18.4 bits), Expect = 1.4e-96, Sum P(4) = 1.4e-96
Identities = 26/131 (19%), Positives = 53/131 (40%)
Query: 1128 NILKKANQKRALDDLV----IQSGGYNTEFFKKLDPMELFSGHRTLPMKTMQKEKA---I 1180
N+ KK K+ +D ++ SG +E F +L + + L K + +K I
Sbjct: 1457 NLTKK--MKKIVDAVIKYKDSSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERI 1514
Query: 1181 NNGNEVSLSNADVEAALKCVEDEADYMALKRAEQEEAVDNQEFTEEAVGRPEDDELVIED 1240
N SL++ + + L C + + ++ V FT ++D+ E+
Sbjct: 1515 RNHKYRSLNDLEKDVMLLCQNAQTFNLEGSLIYEDSIVLQSVFTSVRQKIEKEDDSEGEE 1574
Query: 1241 TVRTDEPTDQG 1251
+ +E ++G
Sbjct: 1575 SEEEEEGEEEG 1585
Score = 37 (18.1 bits), Expect = 1.8e-96, Sum P(4) = 1.8e-96
Identities = 12/48 (25%), Positives = 24/48 (50%)
Query: 1515 RSPDSDSKLSRKRHDGSTELKTCES----IFIDLEQKSASRSKM-GGK 1557
+ DS+ + S + +G E ES + I L +K ++ ++ GG+
Sbjct: 1566 KEDDSEGEESEEEEEGEEEGSESESRSVKVKIKLGRKEKAQDRLKGGR 1613
>UNIPROTKB|Q9HBD4 [details] [associations]
symbol:SMARCA4 "SMARCA4 isoform 2" species:9606 "Homo
sapiens" [GO:0004386 "helicase activity" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0000792 "heterochromatin" evidence=IEA] [GO:0000902 "cell
morphogenesis" evidence=IEA] [GO:0000977 "RNA polymerase II
regulatory region sequence-specific DNA binding" evidence=IEA]
[GO:0001570 "vasculogenesis" evidence=IEA] [GO:0001832 "blastocyst
growth" evidence=IEA] [GO:0001835 "blastocyst hatching"
evidence=IEA] [GO:0001889 "liver development" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0005719 "nuclear
euchromatin" evidence=IEA] [GO:0005726 "perichromatin fibrils"
evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=IEA]
[GO:0006346 "methylation-dependent chromatin silencing"
evidence=IEA] [GO:0007403 "glial cell fate determination"
evidence=IEA] [GO:0008134 "transcription factor binding"
evidence=IEA] [GO:0010424 "DNA methylation on cytosine within a CG
sequence" evidence=IEA] [GO:0019827 "stem cell maintenance"
evidence=IEA] [GO:0030198 "extracellular matrix organization"
evidence=IEA] [GO:0030216 "keratinocyte differentiation"
evidence=IEA] [GO:0030900 "forebrain development" evidence=IEA]
[GO:0030902 "hindbrain development" evidence=IEA] [GO:0035116
"embryonic hindlimb morphogenesis" evidence=IEA] [GO:0035887
"aortic smooth muscle cell differentiation" evidence=IEA]
[GO:0043388 "positive regulation of DNA binding" evidence=IEA]
[GO:0043966 "histone H3 acetylation" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0048562 "embryonic organ morphogenesis"
evidence=IEA] [GO:0048730 "epidermis morphogenesis" evidence=IEA]
[GO:0060318 "definitive erythrocyte differentiation" evidence=IEA]
[GO:0060347 "heart trabecula formation" evidence=IEA] [GO:0071564
"npBAF complex" evidence=IEA] [GO:0071565 "nBAF complex"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001487
InterPro:IPR001650 InterPro:IPR006576 InterPro:IPR014978
Pfam:PF00176 Pfam:PF00271 Pfam:PF00439 Pfam:PF07533 Pfam:PF08880
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297
SMART:SM00490 SMART:SM00592 SMART:SM00951 GO:GO:0005524
GO:GO:0030216 GO:GO:0045944 GO:GO:0030198 GO:GO:0030900
GO:GO:0001889 GO:GO:0003682 GO:GO:0006338 GO:GO:0000122
GO:GO:0071564 GO:GO:0071565 GO:GO:0000902 GO:GO:0004386
GO:GO:0001570 GO:GO:0035116 GO:GO:0005719 GO:GO:0030902
EMBL:CH471106 GO:GO:0048730 GO:GO:0000977 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0019827 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359 GO:GO:0000792
GO:GO:0060347 GO:GO:0043966 GO:GO:0043388 KO:K11647
InterPro:IPR013999 InterPro:IPR014012 InterPro:IPR006562
Pfam:PF07529 SMART:SM00573 PROSITE:PS51204 EMBL:AC011442
GO:GO:0001835 GO:GO:0007403 GO:GO:0006346 GO:GO:0010424
GO:GO:0060318 GO:GO:0048562 GO:GO:0001832 EMBL:AC011485
GO:GO:0005726 HOGENOM:HOG000172363 HOVERGEN:HBG056636 GO:GO:0035887
CTD:6597 EMBL:AF254822 EMBL:AC006127 UniGene:Hs.327527 GeneID:6597
KEGG:hsa:6597 HGNC:HGNC:11100 PharmGKB:PA35950 ChiTaRS:SMARCA4
GenomeRNAi:6597 NextBio:25661 IPI:IPI00900269 RefSeq:NP_001122321.1
SMR:Q9HBD4 STRING:Q9HBD4 Ensembl:ENST00000358026 UCSC:uc010dxo.3
Uniprot:Q9HBD4
Length = 1679
Score = 657 (236.3 bits), Expect = 1.3e-96, Sum P(4) = 1.3e-96
Identities = 144/318 (45%), Positives = 200/318 (62%)
Query: 440 TTQVRTKFPFLLKFPLREYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTIAMLAHLAC 499
T +V + ++ L++YQ GL+WLV++Y LNGILADEMGLGKTI TIA++ +L
Sbjct: 739 TERVDKQSALMVNGVLKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIALITYLME 798
Query: 500 EKGIWGPHLIVVPTSVMLNWETEFLKWCPAFKILTYFGS-AKERKFKRQGWLKPNSFHVC 558
K I GP LI+VP S + NW EF KW P+ ++Y GS A R F Q L+ F+V
Sbjct: 799 HKRINGPFLIIVPLSTLSNWAYEFDKWAPSVVKVSYKGSPAARRAFVPQ--LRSGKFNVL 856
Query: 559 ITTYRLIIQDSKVFKRKKWKYLILDEAHLIKNWKSQRWQTL-LNFNSKRRILLTGTPLQN 617
+TTY II+D + + +WKY+I+DE H +KN + Q L ++ + RR+LLTGTPLQN
Sbjct: 857 LTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRLLLTGTPLQN 916
Query: 618 DLMELWSLMHFLMPHIFQSHQEFKDWFCNPISGMVEGQEKVNKE----VVDRLHNVLRPF 673
L ELW+L++FL+P IF+S F+ WF P + M + +N+E ++ RLH VLRPF
Sbjct: 917 KLPELWALLNFLLPTIFKSCSTFEQWFNAPFA-MTGEKVDLNEEETILIIRRLHKVLRPF 975
Query: 674 ILRRLKRDVEKQLPMKQEHVIYCRLSKRQRNLYEDFIASSE--TQATLASANFFG----M 727
+LRRLK++VE QLP K E+VI C +S QR LY A T + G +
Sbjct: 976 LLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVLLTDGSEKDKKGKGGTKTL 1035
Query: 728 ISVIMQLRKVCNHPDLFE 745
++ IMQLRK+CNHP +F+
Sbjct: 1036 MNTIMQLRKICNHPYMFQ 1053
Score = 390 (142.3 bits), Expect = 1.3e-96, Sum P(4) = 1.3e-96
Identities = 74/156 (47%), Positives = 109/156 (69%)
Query: 996 GKLQELAILLRKLKSDGHRALIFTQMTKMLDILEEFISLYGYTYMRLDGSTQPEERQTLM 1055
GK + L +L KL++ H+ L+F QMT ++ I+E++ + G+ Y+RLDG+T+ E+R L+
Sbjct: 1080 GKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLL 1139
Query: 1056 QRFNT-NPKIFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQDRCHRIGQTREV 1114
+ FN + F+F+LSTR+GG+G+NL ADTVI +DSDWNP D QAQDR HRIGQ EV
Sbjct: 1140 KTFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEV 1199
Query: 1115 HIYRLISESTIEENILKKANQKRALDDLVIQSGGYN 1150
+ RL + +++EE IL A K +D VIQ+G ++
Sbjct: 1200 RVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFD 1235
Score = 80 (33.2 bits), Expect = 1.3e-96, Sum P(4) = 1.3e-96
Identities = 29/106 (27%), Positives = 51/106 (48%)
Query: 25 NISKDVKKFWMKIEKLVLYKHQMEVDVRKKKALD----KQLEFLLGQTERYSSMLAENLV 80
N ++ KK +IEK + + E + +K +D K+L +LL QT+ Y + L E LV
Sbjct: 510 NTEREQKKENERIEKERMRRLMAEDEEGYRKLIDQKKDKRLAYLLQQTDEYVANLTE-LV 568
Query: 81 DSHKPVQQSPMREQPGIQYKEADENGAEEPGVQSKEADEDDAEQHS 126
HK Q + +++ + K+A+ + P + D+ Q S
Sbjct: 569 RQHKAAQVAKEKKKKK-KKKKAENAEGQTPAIGPDGEPLDETSQMS 613
Score = 51 (23.0 bits), Expect = 1.4e-93, Sum P(4) = 1.4e-93
Identities = 15/53 (28%), Positives = 26/53 (49%)
Query: 81 DSHKPVQQSPMREQ-PGIQYKEADENGAEEPGVQSKEADEDDAEQHSGFEPQL 132
D+ K Q E PG Y+ A + +EE G + +E +E++ + + P L
Sbjct: 632 DAPKAGQLEAWLEMNPG--YEVAPRSDSEESGSEEEEEEEEEEQPQAAQPPTL 682
Score = 39 (18.8 bits), Expect = 1.3e-96, Sum P(4) = 1.3e-96
Identities = 18/85 (21%), Positives = 36/85 (42%)
Query: 1154 FKKLDPMELFSGHRTLPMKTMQKEKAI--NNGNEVSLSNADV-EAALKCVEDEADYMALK 1210
FKK+ E H+ + ++K+ + N +L + + E ++ V +
Sbjct: 1539 FKKIK--ERIRNHKYRSLNDLEKDVMLLCQNAQTFNLEGSLIYEDSI--VLQSVFTSVRQ 1594
Query: 1211 RAEQEEAVDNQEFTEEAVGRPEDDE 1235
+ E+E+ + +E EE G E E
Sbjct: 1595 KIEKEDDSEGEESEEEEEGEEEGSE 1619
Score = 38 (18.4 bits), Expect = 1.7e-96, Sum P(4) = 1.7e-96
Identities = 26/131 (19%), Positives = 53/131 (40%)
Query: 1128 NILKKANQKRALDDLV----IQSGGYNTEFFKKLDPMELFSGHRTLPMKTMQKEKA---I 1180
N+ KK K+ +D ++ SG +E F +L + + L K + +K I
Sbjct: 1489 NLTKK--MKKIVDAVIKYKDSSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERI 1546
Query: 1181 NNGNEVSLSNADVEAALKCVEDEADYMALKRAEQEEAVDNQEFTEEAVGRPEDDELVIED 1240
N SL++ + + L C + + ++ V FT ++D+ E+
Sbjct: 1547 RNHKYRSLNDLEKDVMLLCQNAQTFNLEGSLIYEDSIVLQSVFTSVRQKIEKEDDSEGEE 1606
Query: 1241 TVRTDEPTDQG 1251
+ +E ++G
Sbjct: 1607 SEEEEEGEEEG 1617
Score = 37 (18.1 bits), Expect = 2.1e-96, Sum P(4) = 2.1e-96
Identities = 12/48 (25%), Positives = 24/48 (50%)
Query: 1515 RSPDSDSKLSRKRHDGSTELKTCES----IFIDLEQKSASRSKM-GGK 1557
+ DS+ + S + +G E ES + I L +K ++ ++ GG+
Sbjct: 1598 KEDDSEGEESEEEEEGEEEGSESESRSVKVKIKLGRKEKAQDRLKGGR 1645
>UNIPROTKB|K7GT64 [details] [associations]
symbol:LOC100622433 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001487
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 Pfam:PF00439
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297
SMART:SM00490 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 GeneTree:ENSGT00550000074659 EMBL:FP102365
Ensembl:ENSSSCT00000034320 Uniprot:K7GT64
Length = 980
Score = 657 (236.3 bits), Expect = 2.6e-96, Sum P(3) = 2.6e-96
Identities = 144/318 (45%), Positives = 200/318 (62%)
Query: 440 TTQVRTKFPFLLKFPLREYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTIAMLAHLAC 499
T +V + ++ L++YQ GL+WLV++Y LNGILADEMGLGKTI TIA++ +L
Sbjct: 72 TERVDKQSALMVNGVLKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIALITYLME 131
Query: 500 EKGIWGPHLIVVPTSVMLNWETEFLKWCPAFKILTYFGS-AKERKFKRQGWLKPNSFHVC 558
K I GP LI+VP S + NW EF KW P+ ++Y GS A R F Q L+ F+V
Sbjct: 132 HKRINGPFLIIVPLSTLSNWAYEFDKWAPSVVKVSYKGSPAARRAFVPQ--LRSGKFNVL 189
Query: 559 ITTYRLIIQDSKVFKRKKWKYLILDEAHLIKNWKSQRWQTL-LNFNSKRRILLTGTPLQN 617
+TTY II+D + + +WKY+I+DE H +KN + Q L ++ + RR+LLTGTPLQN
Sbjct: 190 LTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRLLLTGTPLQN 249
Query: 618 DLMELWSLMHFLMPHIFQSHQEFKDWFCNPISGMVEGQEKVNKE----VVDRLHNVLRPF 673
L ELW+L++FL+P IF+S F+ WF P + M + +N+E ++ RLH VLRPF
Sbjct: 250 KLPELWALLNFLLPTIFKSCSTFEQWFNAPFA-MTGEKVDLNEEETILIIRRLHKVLRPF 308
Query: 674 ILRRLKRDVEKQLPMKQEHVIYCRLSKRQRNLYEDFIASSE--TQATLASANFFG----M 727
+LRRLK++VE QLP K E+VI C +S QR LY A T + G +
Sbjct: 309 LLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVLLTDGSEKDKKGKGGTKTL 368
Query: 728 ISVIMQLRKVCNHPDLFE 745
++ IMQLRK+CNHP +F+
Sbjct: 369 MNTIMQLRKICNHPYMFQ 386
Score = 390 (142.3 bits), Expect = 2.6e-96, Sum P(3) = 2.6e-96
Identities = 74/156 (47%), Positives = 109/156 (69%)
Query: 996 GKLQELAILLRKLKSDGHRALIFTQMTKMLDILEEFISLYGYTYMRLDGSTQPEERQTLM 1055
GK + L +L KL++ H+ L+F QMT ++ I+E++ + G+ Y+RLDG+T+ E+R L+
Sbjct: 413 GKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLL 472
Query: 1056 QRFNT-NPKIFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQDRCHRIGQTREV 1114
+ FN + F+F+LSTR+GG+G+NL ADTVI +DSDWNP D QAQDR HRIGQ EV
Sbjct: 473 KTFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEV 532
Query: 1115 HIYRLISESTIEENILKKANQKRALDDLVIQSGGYN 1150
+ RL + +++EE IL A K +D VIQ+G ++
Sbjct: 533 RVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFD 568
Score = 39 (18.8 bits), Expect = 2.6e-96, Sum P(3) = 2.6e-96
Identities = 18/85 (21%), Positives = 36/85 (42%)
Query: 1154 FKKLDPMELFSGHRTLPMKTMQKEKAI--NNGNEVSLSNADV-EAALKCVEDEADYMALK 1210
FKK+ E H+ + ++K+ + N +L + + E ++ V +
Sbjct: 840 FKKIK--ERIRNHKYRSLNDLEKDVMLLCQNAQTFNLEGSLIYEDSI--VLQSVFTSVRQ 895
Query: 1211 RAEQEEAVDNQEFTEEAVGRPEDDE 1235
+ E+E+ + +E EE G E E
Sbjct: 896 KIEKEDDSEGEESEEEEEGEEEGSE 920
Score = 38 (18.4 bits), Expect = 3.3e-96, Sum P(3) = 3.3e-96
Identities = 26/131 (19%), Positives = 53/131 (40%)
Query: 1128 NILKKANQKRALDDLV----IQSGGYNTEFFKKLDPMELFSGHRTLPMKTMQKEKA---I 1180
N+ KK K+ +D ++ SG +E F +L + + L K + +K I
Sbjct: 790 NLTKK--MKKIVDAVIKYKDSSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERI 847
Query: 1181 NNGNEVSLSNADVEAALKCVEDEADYMALKRAEQEEAVDNQEFTEEAVGRPEDDELVIED 1240
N SL++ + + L C + + ++ V FT ++D+ E+
Sbjct: 848 RNHKYRSLNDLEKDVMLLCQNAQTFNLEGSLIYEDSIVLQSVFTSVRQKIEKEDDSEGEE 907
Query: 1241 TVRTDEPTDQG 1251
+ +E ++G
Sbjct: 908 SEEEEEGEEEG 918
Score = 37 (18.1 bits), Expect = 4.2e-96, Sum P(3) = 4.2e-96
Identities = 12/48 (25%), Positives = 24/48 (50%)
Query: 1515 RSPDSDSKLSRKRHDGSTELKTCES----IFIDLEQKSASRSKM-GGK 1557
+ DS+ + S + +G E ES + I L +K ++ ++ GG+
Sbjct: 899 KEDDSEGEESEEEEEGEEEGSESESRSVKVKIKLGRKEKAQDRLKGGR 946
>WB|WBGene00016868 [details] [associations]
symbol:C52B9.8 species:6239 "Caenorhabditis elegans"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] InterPro:IPR000330
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003677 GO:GO:0004386
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
KO:K11647 GeneTree:ENSGT00550000074659 InterPro:IPR013999
InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529 SMART:SM00573
PROSITE:PS51204 EMBL:FO080644 PIR:T28937 RefSeq:NP_508736.1
ProteinModelPortal:Q22944 SMR:Q22944 STRING:Q22944 PaxDb:Q22944
EnsemblMetazoa:C52B9.8 GeneID:180705 KEGG:cel:CELE_C52B9.8
UCSC:C52B9.8 CTD:180705 WormBase:C52B9.8 InParanoid:Q22944
NextBio:910548 Uniprot:Q22944
Length = 1336
Score = 604 (217.7 bits), Expect = 1.0e-95, Sum P(4) = 1.0e-95
Identities = 123/295 (41%), Positives = 181/295 (61%)
Query: 455 LREYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTIAMLAHLACEKGIWGPHLIVVPTS 514
L+ YQ GL+W+V+++ LNGILADEMGLGKTI TIA + +L K GP L++VP S
Sbjct: 366 LKPYQIKGLEWMVSLFNNNLNGILADEMGLGKTIQTIAFITYLMEIKKTSGPFLVIVPLS 425
Query: 515 VMLNWETEFLKWCPAFKILTYFGSAKERKFKRQGWLKPNSFHVCITTYRLIIQDSKVFKR 574
+ NW+ EF KW ++ Y G + RK + +K F+V +TT+ +I++ + +
Sbjct: 426 TVPNWQNEFDKWAANVHLIAYKGPKETRKVF-EPIIKSGKFNVLLTTFEYVIREKALLGK 484
Query: 575 KKWKYLILDEAHLIKNWKSQRWQTL-LNFNSKRRILLTGTPLQNDLMELWSLMHFLMPHI 633
+WKY+I+DE H +KN + + L F +RR+L+TGTPLQN L ELW+L++FL+P I
Sbjct: 485 LRWKYMIIDEGHRLKNQHCKLTEMLNTRFQCQRRLLITGTPLQNKLPELWALLNFLLPSI 544
Query: 634 FQSHQEFKDWFCNPISGMVEGQEKVNKE---VVDRLHNVLRPFILRRLKRDVEKQLPMKQ 690
F S F+ WF P + E E +E ++ RLH VLRPF+LRRLK++VE +LP K
Sbjct: 545 FSSCSTFEQWFNAPFATTGEKVELTQEETMLIIRRLHKVLRPFLLRRLKKEVESELPDKM 604
Query: 691 EHVIYCRLSKRQRNLYEDFIASSETQATLASANFFGMISVIMQLRKVCNHPDLFE 745
E V+ C +S Q+ LY+ + + + + ++ LRK+CNHP LFE
Sbjct: 605 EFVVRCDMSALQKVLYKHMQKGLLLDGKTNTGSK-SLRNTMIHLRKLCNHPFLFE 658
Score = 445 (161.7 bits), Expect = 1.0e-95, Sum P(4) = 1.0e-95
Identities = 102/255 (40%), Positives = 155/255 (60%)
Query: 996 GKLQELAILLRKLKSDGHRALIFTQMTKMLDILEEFISLYGYTYMRLDGSTQPEERQTLM 1055
GKL+ L+ +L KL++ GHR L+F QMT M+ I+E+F++ Y+RLDGST+P+ER L+
Sbjct: 683 GKLELLSRILPKLQATGHRVLMFFQMTSMMTIVEDFLAGGTIQYLRLDGSTKPDERGALL 742
Query: 1056 QRFNT-NPKIFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQDRCHRIGQTREV 1114
+FN N + FLF+LSTR+GG+G+NL ADTVI +DSDWNP D QAQDR HRIGQ EV
Sbjct: 743 DKFNAPNSEYFLFMLSTRAGGLGLNLQTADTVIIFDSDWNPHQDMQAQDRAHRIGQKAEV 802
Query: 1115 HIYRLISESTIEENILKKANQKRALDDLVIQSGGYNTEFFKKLDPMELFSGHRTLPMKTM 1174
++RLI+ +++EE IL A K +D+ VIQ+G K D + R + +
Sbjct: 803 RVFRLITANSVEEKILAAARYKLNVDEKVIQAG--------KFDNRSTGAERREILENII 854
Query: 1175 QKEKAINNGNEVSLSNADVEAALKCVEDEADYMALKRAEQEEAVDNQEFTEEAVGRPEDD 1234
+ E EV ++ D+ L E+E + ++ +QE +N++ ++A R +
Sbjct: 855 KTENESEEDEEVP-NDEDINDILSRSEEE--FELFQKMDQER-FENEQ-AQKAKPRLVGE 909
Query: 1235 ELVIEDTVRTDEPTD 1249
+ + D +R + TD
Sbjct: 910 DEIPRDILRAADETD 924
Score = 55 (24.4 bits), Expect = 1.0e-95, Sum P(4) = 1.0e-95
Identities = 28/99 (28%), Positives = 49/99 (49%)
Query: 28 KDVKKFWMKIEKLVLYKHQ-MEVDVRKKKALDKQLEFLLGQTERYSSMLAENLVDSHKPV 86
+++K +I+KL+ + + +KK D++L +LL QT+ Y L + L+ +
Sbjct: 234 EEMKNEKNRIQKLIQEDEEGYRAMLDEKK--DQRLVYLLEQTDDYIKSLCD-LLKQQQNA 290
Query: 87 QQSPMREQPGIQYKEADENGAEEPGVQS--KEADEDDAE 123
+ + I+ KE D AEE V+S +A DD E
Sbjct: 291 TAGSLATKSYIR-KEYD-GVAEEDKVKSILDKARNDDDE 327
Score = 48 (22.0 bits), Expect = 1.0e-95, Sum P(4) = 1.0e-95
Identities = 13/45 (28%), Positives = 26/45 (57%)
Query: 1519 SDSKLSRKRHDGSTELKTCESIFIDLE-QKSASRSKMG-GKISIT 1561
S+ K + +HD + LK E + ++ +KS + ++G G+ SI+
Sbjct: 1152 SEKKKKKHKHDSDSALKLREGSPLSVDKEKSPMKIRIGQGQPSIS 1196
Score = 47 (21.6 bits), Expect = 1.3e-95, Sum P(4) = 1.3e-95
Identities = 15/41 (36%), Positives = 21/41 (51%)
Query: 1446 KAVKEEPSVEPMSIDDDFYDEDATFSDAMSPPSTSQKKRKK 1486
K KEE S + S DDD + D+ +S+KK+KK
Sbjct: 1121 KGRKEEKSHKHRSDDDDSSPKKKKHRDS---DESSEKKKKK 1158
Score = 46 (21.3 bits), Expect = 1.6e-95, Sum P(4) = 1.6e-95
Identities = 13/46 (28%), Positives = 21/46 (45%)
Query: 1515 RSPDSDSKLSRKRHDGSTELKTCESIFIDLEQKSASRSKMGGKISI 1560
RS D DS +K+H S E + + SA + + G +S+
Sbjct: 1132 RSDDDDSSPKKKKHRDSDESSEKKKKKHKHDSDSALKLREGSPLSV 1177
Score = 41 (19.5 bits), Expect = 5.4e-95, Sum P(4) = 5.4e-95
Identities = 13/52 (25%), Positives = 24/52 (46%)
Query: 1880 KSQSLGKHKLSLSDSVKCPKSKLRKTSMEHSEIQHSSPEPVSNQSVATKDAN 1931
K + KH+ DS PK K + S E SE + + S+ ++ ++ +
Sbjct: 1124 KEEKSHKHRSDDDDS--SPKKKKHRDSDESSEKKKKKHKHDSDSALKLREGS 1173
Score = 40 (19.1 bits), Expect = 9.4e-53, Sum P(4) = 9.4e-53
Identities = 9/28 (32%), Positives = 15/28 (53%)
Query: 1762 KLLSAALHDANSRQQDDKVSNFDRREDG 1789
K+L+AA + N ++ + FD R G
Sbjct: 816 KILAAARYKLNVDEKVIQAGKFDNRSTG 843
Score = 39 (18.8 bits), Expect = 8.7e-95, Sum P(4) = 8.7e-95
Identities = 15/56 (26%), Positives = 20/56 (35%)
Query: 1442 TSESKAVKEEPSVEPMSIDDDFYDEDATFSDAMSPPSTSQKKRKKAELALYDDEER 1497
T SK K+EP E + +ED K+ KK +EER
Sbjct: 1223 TDGSKKDKKEPHKEKEKDKEKEKEEDKGKEKEKHKDKDKDKEHKKKSREDETEEER 1278
Score = 39 (18.8 bits), Expect = 1.5e-52, Sum P(4) = 1.5e-52
Identities = 19/84 (22%), Positives = 35/84 (41%)
Query: 1901 KLRKTSMEHSEIQHSSPEPVSNQSVATKD---ANLRFDLIQEA-------WLEDMDGGRL 1950
K+ + E+ + Q + P V + +D A D I++A +LE M G R
Sbjct: 888 KMDQERFENEQAQKAKPRLVGEDEIP-RDILRAADETDYIEKAKEEGRVPYLEVMPGSRR 946
Query: 1951 SCMDQDLSLETVLSSEIPHNYFPD 1974
+ + D S +T+ + F +
Sbjct: 947 TRREVDYSADTMSDDKFLEKLFDE 970
Score = 38 (18.4 bits), Expect = 2.8e-53, Sum P(4) = 2.8e-53
Identities = 9/20 (45%), Positives = 12/20 (60%)
Query: 1121 SESTIEENILKKANQKRALD 1140
SES ++N LKK + R D
Sbjct: 1039 SESDSDDNSLKKEKKHRKED 1058
Score = 38 (18.4 bits), Expect = 1.5e-52, Sum P(4) = 1.5e-52
Identities = 13/64 (20%), Positives = 30/64 (46%)
Query: 1630 GRYRHPVHCCERFRELIQRYILSVPDNSINEKTSNVGSGKALLKVTEDNVRTLLNVAAEQ 1689
G++ + ER RE+++ I + ++ +E+ N +L +E+ + E+
Sbjct: 835 GKFDNRSTGAER-REILENIIKTENESEEDEEVPNDEDINDILSRSEEEFELFQKMDQER 893
Query: 1690 EDNE 1693
+NE
Sbjct: 894 FENE 897
>SGD|S000001388 [details] [associations]
symbol:STH1 "ATPase component of the RSC chromatin remodeling
complex" species:4932 "Saccharomyces cerevisiae" [GO:0005634
"nucleus" evidence=IEA;IDA] [GO:0007126 "meiosis" evidence=IMP]
[GO:0008094 "DNA-dependent ATPase activity" evidence=IDA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA;IDA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;IMP] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0070577 "histone
acetyl-lysine binding" evidence=IDA] [GO:0006337 "nucleosome
disassembly" evidence=IDA] [GO:0016584 "nucleosome positioning"
evidence=IMP] [GO:0007010 "cytoskeleton organization"
evidence=IGI;IMP] [GO:0031055 "chromatin remodeling at centromere"
evidence=IMP] [GO:0007059 "chromosome segregation" evidence=IGI]
[GO:0016586 "RSC complex" evidence=IDA] [GO:0043044 "ATP-dependent
chromatin remodeling" evidence=IDA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0000086 "G2/M transition of mitotic cell cycle" evidence=IMP]
[GO:0006368 "transcription elongation from RNA polymerase II
promoter" evidence=IDA] [GO:0006302 "double-strand break repair"
evidence=IMP] [GO:0015616 "DNA translocase activity" evidence=IDA]
InterPro:IPR000330 InterPro:IPR001487 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 Pfam:PF00439 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297 SMART:SM00490
SGD:S000001388 GO:GO:0005524 GO:GO:0007126 GO:GO:0000086
GO:GO:0007010 GO:GO:0007059 GO:GO:0000775 GO:GO:0006355
EMBL:BK006942 GO:GO:0006302 GO:GO:0004386 GO:GO:0006368
GO:GO:0006337 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0016586 GO:GO:0043044 GO:GO:0016584
EMBL:DQ115392 Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
GO:GO:0070577 InterPro:IPR018359 EMBL:Z46833 InterPro:IPR014012
PROSITE:PS51204 GeneTree:ENSGT00670000098110 HOGENOM:HOG000172362
GO:GO:0015616 GO:GO:0031055 KO:K11786 OrthoDB:EOG4D565R EMBL:D10595
EMBL:M83755 PIR:S49883 RefSeq:NP_012140.1 ProteinModelPortal:P32597
SMR:P32597 DIP:DIP-5889N IntAct:P32597 MINT:MINT-615490
STRING:P32597 PaxDb:P32597 PeptideAtlas:P32597 EnsemblFungi:YIL126W
GeneID:854680 KEGG:sce:YIL126W CYGD:YIL126w OMA:MEDFLRM
NextBio:977286 Genevestigator:P32597 GermOnline:YIL126W
Uniprot:P32597
Length = 1359
Score = 645 (232.1 bits), Expect = 2.3e-95, Sum P(3) = 2.3e-95
Identities = 132/304 (43%), Positives = 194/304 (63%)
Query: 455 LREYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTIAMLAHLACEKGIWGPHLIVVPTS 514
L+EYQ GL+W+V++Y LNGILADEMGLGKTI +I+++ +L K GP L++VP S
Sbjct: 470 LKEYQLRGLEWMVSLYNNHLNGILADEMGLGKTIQSISLITYLYEVKKDIGPFLVIVPLS 529
Query: 515 VMLNWETEFLKWCPAFKILTYFGSAKERKFKRQGWLKPNSFHVCITTYRLIIQDSKVFKR 574
+ NW EF KW P+ + Y G+ +R Q ++ +F V +TTY II+D + +
Sbjct: 530 TITNWTLEFEKWAPSLNTIIYKGTPNQRH-SLQHQIRVGNFDVLLTTYEYIIKDKSLLSK 588
Query: 575 KKWKYLILDEAHLIKNWKSQRWQTLLNF-NSKRRILLTGTPLQNDLMELWSLMHFLMPHI 633
W ++I+DE H +KN +S+ T+ ++ ++ R++LTGTPLQN+L ELW+L++F++P I
Sbjct: 589 HDWAHMIIDEGHRMKNAQSKLSFTISHYYRTRNRLILTGTPLQNNLPELWALLNFVLPKI 648
Query: 634 FQSHQEFKDWFCNPIS--GMVEGQEKVNKE---VVDRLHNVLRPFILRRLKRDVEKQLPM 688
F S + F+DWF P + G E E +E ++ RLH VLRPF+LRRLK++VEK LP
Sbjct: 649 FNSAKTFEDWFNTPFANTGTQEKLELTEEETLLIIRRLHKVLRPFLLRRLKKEVEKDLPD 708
Query: 689 KQEHVIYCRLSKRQRNLYED-------FIASSETQATLASANFFGMISVIMQLRKVCNHP 741
K E VI C+LS Q+ LY+ F+ + AT G+ + IMQLRK+CNHP
Sbjct: 709 KVEKVIKCKLSGLQQQLYQQMLKHNALFVGAGTEGATKGGIK--GLNNKIMQLRKICNHP 766
Query: 742 DLFE 745
+F+
Sbjct: 767 FVFD 770
Score = 412 (150.1 bits), Expect = 2.3e-95, Sum P(3) = 2.3e-95
Identities = 95/226 (42%), Positives = 138/226 (61%)
Query: 996 GKLQELAILLRKLKSDGHRALIFTQMTKMLDILEEFISLYGYTYMRLDGSTQPEERQTLM 1055
GK + L +L K K+ GHR L+F QMT+++DI+E+F+ + YMRLDGST+ EER ++
Sbjct: 791 GKFELLDRVLPKFKASGHRVLMFFQMTQVMDIMEDFLRMKDLKYMRLDGSTKTEERTEML 850
Query: 1056 QRFNT-NPKIFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQDRCHRIGQTREV 1114
FN + F F+LSTR+GG+G+NL ADTVI +D+DWNP D QAQDR HRIGQ EV
Sbjct: 851 NAFNAPDSDYFCFLLSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQKNEV 910
Query: 1115 HIYRLISESTIEENILKKANQKRALDDLVIQSGGYNTEFFKKLDPMELFSGHRTLPMKTM 1174
I RLI+ ++EE IL++A QK +D VIQ+G ++ + + E F R L +
Sbjct: 911 RILRLITTDSVEEVILERAMQKLDIDGKVIQAGKFDNK--STAEEQEAFL--RRL----I 962
Query: 1175 QKEKAINNGNEVSLSNADVEAALKCVEDEA---DYMALKRAEQEEA 1217
+ E ++ ++ L + ++ L DE D + +R QE A
Sbjct: 963 ESETNRDDDDKAELDDDELNDTLARSADEKILFDKIDKERMNQERA 1008
Score = 51 (23.0 bits), Expect = 1.7e-57, Sum P(3) = 1.7e-57
Identities = 28/138 (20%), Positives = 54/138 (39%)
Query: 1110 QTREVHIYRLISESTIEENILKKANQKRALDDLVIQSGGYNTEFFKKLDPMELFSGHRTL 1169
+ +E + RLI T ++ K L+D + +S F K+D +
Sbjct: 952 EEQEAFLRRLIESETNRDDDDKAELDDDELNDTLARSADEKI-LFDKIDKERMNQERADA 1010
Query: 1170 PMKTMQ--KEKAINNGNEVSLSNADVEAALKCVEDE--ADYMALKRAEQEEAVDNQEFTE 1225
+ ++ + I + D+E K + E KR ++ + ++F E
Sbjct: 1011 KAQGLRVPPPRLIQLDELPKVFREDIEEHFKKEDSEPLGRIRQKKRVYYDDGLTEEQFLE 1070
Query: 1226 EAVGRPEDDELVIEDTVR 1243
AV EDD + +ED ++
Sbjct: 1071 -AV---EDDNMSLEDAIK 1084
Score = 41 (19.5 bits), Expect = 2.3e-95, Sum P(3) = 2.3e-95
Identities = 9/21 (42%), Positives = 13/21 (61%)
Query: 322 EIALLQKESEIPVEELLARYR 342
EI + + S +E+LL RYR
Sbjct: 43 EITIPKPRSSAQLEQLLYRYR 63
Score = 40 (19.1 bits), Expect = 2.9e-95, Sum P(3) = 2.9e-95
Identities = 10/21 (47%), Positives = 13/21 (61%)
Query: 48 EVDVRKKKALDKQLEFLLGQT 68
EV R K+ +DKQ L+G T
Sbjct: 449 EVAHRIKEKIDKQPSILVGGT 469
Score = 40 (19.1 bits), Expect = 2.4e-56, Sum P(3) = 2.4e-56
Identities = 10/34 (29%), Positives = 17/34 (50%)
Query: 1212 AEQEEAVDNQEFTEEAVGRPEDDELVIEDTVRTD 1245
AE++EA + E R +DD+ ++D D
Sbjct: 951 AEEQEAF-LRRLIESETNRDDDDKAELDDDELND 983
Score = 37 (18.1 bits), Expect = 6.1e-95, Sum P(3) = 6.1e-95
Identities = 5/17 (29%), Positives = 13/17 (76%)
Query: 317 NNYIDEIALLQKESEIP 333
N ++ + LL+K++++P
Sbjct: 116 NKHLVALQLLEKDTDVP 132
>UNIPROTKB|F1MJ46 [details] [associations]
symbol:SMARCA4 "Transcription activator BRG1" species:9913
"Bos taurus" [GO:0071565 "nBAF complex" evidence=IEA] [GO:0071564
"npBAF complex" evidence=IEA] [GO:0060347 "heart trabecula
formation" evidence=IEA] [GO:0060318 "definitive erythrocyte
differentiation" evidence=IEA] [GO:0048730 "epidermis
morphogenesis" evidence=IEA] [GO:0048562 "embryonic organ
morphogenesis" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0043966 "histone H3 acetylation" evidence=IEA] [GO:0043388
"positive regulation of DNA binding" evidence=IEA] [GO:0035887
"aortic smooth muscle cell differentiation" evidence=IEA]
[GO:0035116 "embryonic hindlimb morphogenesis" evidence=IEA]
[GO:0030902 "hindbrain development" evidence=IEA] [GO:0030900
"forebrain development" evidence=IEA] [GO:0030216 "keratinocyte
differentiation" evidence=IEA] [GO:0030198 "extracellular matrix
organization" evidence=IEA] [GO:0019827 "stem cell maintenance"
evidence=IEA] [GO:0010424 "DNA methylation on cytosine within a CG
sequence" evidence=IEA] [GO:0008134 "transcription factor binding"
evidence=IEA] [GO:0007403 "glial cell fate determination"
evidence=IEA] [GO:0006346 "methylation-dependent chromatin
silencing" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=IEA] [GO:0005726 "perichromatin fibrils" evidence=IEA]
[GO:0005719 "nuclear euchromatin" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0001889 "liver development"
evidence=IEA] [GO:0001835 "blastocyst hatching" evidence=IEA]
[GO:0001832 "blastocyst growth" evidence=IEA] [GO:0001570
"vasculogenesis" evidence=IEA] [GO:0000977 "RNA polymerase II
regulatory region sequence-specific DNA binding" evidence=IEA]
[GO:0000902 "cell morphogenesis" evidence=IEA] [GO:0000792
"heterochromatin" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] InterPro:IPR000330 InterPro:IPR001487
InterPro:IPR001650 InterPro:IPR006576 InterPro:IPR014978
Pfam:PF00176 Pfam:PF00271 Pfam:PF00439 Pfam:PF07533 Pfam:PF08880
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297
SMART:SM00490 SMART:SM00592 SMART:SM00951 GO:GO:0005524
GO:GO:0030216 GO:GO:0045944 GO:GO:0030198 GO:GO:0030900
GO:GO:0001889 GO:GO:0003682 GO:GO:0006338 GO:GO:0000122
GO:GO:0071564 GO:GO:0071565 GO:GO:0000902 GO:GO:0004386
GO:GO:0001570 GO:GO:0035116 GO:GO:0005719 GO:GO:0030902
GO:GO:0048730 GO:GO:0000977 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0019827 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 GO:GO:0000792 GO:GO:0060347
GO:GO:0043966 GO:GO:0043388 GeneTree:ENSGT00550000074659
InterPro:IPR013999 InterPro:IPR014012 InterPro:IPR006562
Pfam:PF07529 SMART:SM00573 PROSITE:PS51204 GO:GO:0001835
GO:GO:0007403 GO:GO:0006346 GO:GO:0010424 GO:GO:0060318
GO:GO:0048562 GO:GO:0001832 GO:GO:0005726 GO:GO:0035887
IPI:IPI00693529 OMA:HKPMESM EMBL:DAAA02019479 EMBL:DAAA02019480
EMBL:DAAA02019481 Ensembl:ENSBTAT00000025598 ArrayExpress:F1MJ46
Uniprot:F1MJ46
Length = 1604
Score = 657 (236.3 bits), Expect = 5.4e-95, Sum P(4) = 5.4e-95
Identities = 144/318 (45%), Positives = 200/318 (62%)
Query: 440 TTQVRTKFPFLLKFPLREYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTIAMLAHLAC 499
T +V + ++ L++YQ GL+WLV++Y LNGILADEMGLGKTI TIA++ +L
Sbjct: 731 TERVDKQSALMVNGVLKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIALITYLME 790
Query: 500 EKGIWGPHLIVVPTSVMLNWETEFLKWCPAFKILTYFGS-AKERKFKRQGWLKPNSFHVC 558
K I GP LI+VP S + NW EF KW P+ ++Y GS A R F Q L+ F+V
Sbjct: 791 HKRINGPFLIIVPLSTLSNWAYEFDKWAPSVVKVSYKGSPAARRAFVPQ--LRSGKFNVL 848
Query: 559 ITTYRLIIQDSKVFKRKKWKYLILDEAHLIKNWKSQRWQTL-LNFNSKRRILLTGTPLQN 617
+TTY II+D + + +WKY+I+DE H +KN + Q L ++ + RR+LLTGTPLQN
Sbjct: 849 LTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRLLLTGTPLQN 908
Query: 618 DLMELWSLMHFLMPHIFQSHQEFKDWFCNPISGMVEGQEKVNKE----VVDRLHNVLRPF 673
L ELW+L++FL+P IF+S F+ WF P + M + +N+E ++ RLH VLRPF
Sbjct: 909 KLPELWALLNFLLPTIFKSCSTFEQWFNAPFA-MTGEKVDLNEEETILIIRRLHKVLRPF 967
Query: 674 ILRRLKRDVEKQLPMKQEHVIYCRLSKRQRNLYEDFIASSE--TQATLASANFFG----M 727
+LRRLK++VE QLP K E+VI C +S QR LY A T + G +
Sbjct: 968 LLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVLLTDGSEKDKKGKGGTKTL 1027
Query: 728 ISVIMQLRKVCNHPDLFE 745
++ IMQLRK+CNHP +F+
Sbjct: 1028 MNTIMQLRKICNHPYMFQ 1045
Score = 375 (137.1 bits), Expect = 5.4e-95, Sum P(4) = 5.4e-95
Identities = 92/257 (35%), Positives = 142/257 (55%)
Query: 996 GKLQELAILLRKLKSDGHRALIFTQMTKMLDILEEFISLYGYTYMRLDGSTQPEERQTLM 1055
GK + L +L KL++ H+ L+F QMT ++ I+E++ + G+ Y+RLDG+T+ E+R L+
Sbjct: 1072 GKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLL 1131
Query: 1056 QRFNTNPKIFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQDRCHRIGQTREVH 1115
FN + +LSTR+GG+G+NL ADTVI +DSDWNP D QAQDR HRIGQ EV
Sbjct: 1132 T-FNEPGSEYFILLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVR 1190
Query: 1116 IYRLISESTIEENILKKANQKRALDDLVIQSGGYNTEFFKKLDPMELFSGHRTLPMKTMQ 1175
+ RL + +++EE IL A K +D VIQ+G ++ +K E R ++
Sbjct: 1191 VLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFD----QKSSSHE----RRAFLQAILE 1242
Query: 1176 KEKAINNGNEVSLSNADVEAALKCVEDEAD-YMALKRAEQEEAVDNQEFTEEAVGRPEDD 1234
E+ +EV + V + E+E D +M + + E N + + E+D
Sbjct: 1243 HEEQDEEEDEVP-DDETVNQMIARHEEEFDLFMRMDLDRRREEARNPKRKPRLM---EED 1298
Query: 1235 EL---VIEDTVRTDEPT 1248
EL +I+D + T
Sbjct: 1299 ELPSWIIKDDAEVERLT 1315
Score = 80 (33.2 bits), Expect = 5.4e-95, Sum P(4) = 5.4e-95
Identities = 29/106 (27%), Positives = 51/106 (48%)
Query: 25 NISKDVKKFWMKIEKLVLYKHQMEVDVRKKKALD----KQLEFLLGQTERYSSMLAENLV 80
N ++ KK +IEK + + E + +K +D K+L +LL QT+ Y + L E LV
Sbjct: 502 NTEREQKKENERIEKERMRRLMAEDEEGYRKLIDQKKDKRLAYLLQQTDEYVANLTE-LV 560
Query: 81 DSHKPVQQSPMREQPGIQYKEADENGAEEPGVQSKEADEDDAEQHS 126
HK Q + +++ + K+A+ + P + D+ Q S
Sbjct: 561 RQHKAAQVAKEKKKKK-KKKKAENAEGQTPAIGPDGEPLDETSQMS 605
Score = 49 (22.3 bits), Expect = 9.4e-92, Sum P(4) = 9.4e-92
Identities = 15/53 (28%), Positives = 25/53 (47%)
Query: 81 DSHKPVQQSPMREQ-PGIQYKEADENGAEEPGVQSKEADEDDAEQHSGFEPQL 132
D+ K Q E PG Y+ A + +EE G + +E +E++ + P L
Sbjct: 624 DAPKAGQLEAWLEMNPG--YEVAPRSDSEESGSEEEEEEEEEEQPQPAQPPTL 674
Score = 45 (20.9 bits), Expect = 1.5e-60, Sum P(4) = 1.5e-60
Identities = 9/18 (50%), Positives = 11/18 (61%)
Query: 1255 TANNDNGMMLTGNDPKEE 1272
T D GM+LT N+P E
Sbjct: 1122 TKAEDRGMLLTFNEPGSE 1139
Score = 41 (19.5 bits), Expect = 3.9e-60, Sum P(4) = 3.9e-60
Identities = 16/60 (26%), Positives = 27/60 (45%)
Query: 1190 NADVEAALKCVEDEADYMALKRAEQEEAVDNQEFTEEAVGRPEDDELVIEDTVRTDEPTD 1249
N D + + D+ +RA + ++++E EE P DDE V + R +E D
Sbjct: 1213 NVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEQDEEEDEVP-DDETVNQMIARHEEEFD 1271
Score = 39 (18.8 bits), Expect = 4.1e-61, Sum P(3) = 4.1e-61
Identities = 18/85 (21%), Positives = 36/85 (42%)
Query: 1154 FKKLDPMELFSGHRTLPMKTMQKEKAI--NNGNEVSLSNADV-EAALKCVEDEADYMALK 1210
FKK+ E H+ + ++K+ + N +L + + E ++ V +
Sbjct: 1464 FKKIK--ERIRNHKYRSLNDLEKDVMLLCQNAQTFNLEGSLIYEDSI--VLQSVFTSVRQ 1519
Query: 1211 RAEQEEAVDNQEFTEEAVGRPEDDE 1235
+ E+E+ + +E EE G E E
Sbjct: 1520 KIEKEDDSEGEESEEEEEGEEEGSE 1544
Score = 38 (18.4 bits), Expect = 5.3e-61, Sum P(3) = 5.3e-61
Identities = 26/131 (19%), Positives = 53/131 (40%)
Query: 1128 NILKKANQKRALDDLV----IQSGGYNTEFFKKLDPMELFSGHRTLPMKTMQKEKA---I 1180
N+ KK K+ +D ++ SG +E F +L + + L K + +K I
Sbjct: 1414 NLTKK--MKKIVDAVIKYKDSSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERI 1471
Query: 1181 NNGNEVSLSNADVEAALKCVEDEADYMALKRAEQEEAVDNQEFTEEAVGRPEDDELVIED 1240
N SL++ + + L C + + ++ V FT ++D+ E+
Sbjct: 1472 RNHKYRSLNDLEKDVMLLCQNAQTFNLEGSLIYEDSIVLQSVFTSVRQKIEKEDDSEGEE 1531
Query: 1241 TVRTDEPTDQG 1251
+ +E ++G
Sbjct: 1532 SEEEEEGEEEG 1542
Score = 37 (18.1 bits), Expect = 5.4e-95, Sum P(4) = 5.4e-95
Identities = 12/48 (25%), Positives = 24/48 (50%)
Query: 1515 RSPDSDSKLSRKRHDGSTELKTCES----IFIDLEQKSASRSKM-GGK 1557
+ DS+ + S + +G E ES + I L +K ++ ++ GG+
Sbjct: 1523 KEDDSEGEESEEEEEGEEEGSESESRSVKVKIKLGRKEKAQDRLKGGR 1570
>GENEDB_PFALCIPARUM|PF11_0053 [details] [associations]
symbol:PF11_0053 "PfSNF2L" species:5833
"Plasmodium falciparum" [GO:0006338 "chromatin remodeling"
evidence=ISS] [GO:0008094 "DNA-dependent ATPase activity"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0008026 "ATP-dependent helicase
activity" evidence=ISS] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR009057 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0006355 GO:GO:0003677
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0006338 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0016585 GO:GO:0008026
EMBL:AE014186 GO:GO:0008094 KO:K01509 RefSeq:XP_001347729.1
ProteinModelPortal:Q8IIW0 IntAct:Q8IIW0 MINT:MINT-1585538
EnsemblProtists:PF11_0053:mRNA GeneID:810605 KEGG:pfa:PF11_0053
EuPathDB:PlasmoDB:PF3D7_1104200 HOGENOM:HOG000282197
ProtClustDB:CLSZ2444952 Uniprot:Q8IIW0
Length = 1426
Score = 621 (223.7 bits), Expect = 5.7e-95, Sum P(3) = 5.7e-95
Identities = 126/301 (41%), Positives = 186/301 (61%)
Query: 446 KFPFLLKFPLREYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTIAMLAHLACEKGIWG 505
K P + ++ YQ GL+WL +Y ++NGILADEMGLGKT+ TI++L +L K I
Sbjct: 313 KQPMNINGTMKPYQLEGLNWLYQLYRFKINGILADEMGLGKTLQTISLLCYLRFNKNIKK 372
Query: 506 PHLIVVPTSVMLNWETEFLKWCPAFKILTYFGSAKERKFKRQGWLKPNSFHVCITTYRLI 565
+I+ P S + NW E KWC K Y+G+ +RK + L + F V +TTY ++
Sbjct: 373 KSIIICPRSTLDNWYEEIKKWCTPMKAFKYYGNKDQRKELNRNLLH-SDFDVLLTTYEIV 431
Query: 566 IQDSKVFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPLQNDLMELWSL 625
I+D W +L++DEAH IKN KS ++ S+ R+L+TGTPL N+L ELWSL
Sbjct: 432 IKDKSALYDIDWFFLVIDEAHRIKNEKSVLSSSVRFLRSENRLLITGTPLHNNLKELWSL 491
Query: 626 MHFLMPHIFQSHQEFKDWFCNPISGMVEGQEKVNKEVVDRLHNVLRPFILRRLKRDVEKQ 685
++FLMP IF + +EF + F N IS + K E++ +LH +L+PF+LRRLK +VE+
Sbjct: 492 LNFLMPKIFDNSEEFDNLF-N-ISKISTNDNK-QSEIITQLHTILKPFMLRRLKVEVEQS 548
Query: 686 LPMKQEHVIYCRLSKRQRNLYEDFIASSETQATLASANFFGMISVIMQLRKVCNHPDLFE 745
LP K+E I+ +SK Q+ LY D ++ + + + M++++MQLRK CNHP LF+
Sbjct: 549 LPPKREIYIFVGMSKLQKKLYSDILSKNIDVLNAMTGSKNQMLNILMQLRKCCNHPYLFD 608
Query: 746 G 746
G
Sbjct: 609 G 609
Score = 423 (154.0 bits), Expect = 5.7e-95, Sum P(3) = 5.7e-95
Identities = 102/283 (36%), Positives = 158/283 (55%)
Query: 984 YFPDRRLIQFDCGKLQELAILLRKLKSDGHRALIFTQMTKMLDILEEFISLYGYTYMRLD 1043
Y LI+ GK+ L LL +LK + R L+F+QMT++LDI++++ Y Y+R+D
Sbjct: 615 YIEGNHLIETS-GKMSLLDKLLPRLKKENSRVLLFSQMTRLLDIIDDYCRWKNYPYLRID 673
Query: 1044 GSTQPEERQTLMQRFNT-NPKIFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQ 1102
GST +ERQ + +FN N K F+F+LSTR+GG+GINL AD VI +DSD+NP MD QA
Sbjct: 674 GSTPGDERQVRINQFNEPNSKYFIFLLSTRAGGIGINLTTADIVILFDSDYNPQMDIQAM 733
Query: 1103 DRCHRIGQTREVHIYRLISESTIEENILKKANQKRALDDLVIQSGGYNTEFFKKLDPMEL 1162
DR HRIGQ + V +YR ++++++EE I+++A +K LD L+IQ G N K+ + EL
Sbjct: 734 DRAHRIGQKKRVIVYRFVTQNSVEEKIVERAAKKLKLDSLIIQKGKLNLNSAKENNKQEL 793
Query: 1163 FSG-HRTLP--MKTMQKEKAINNGNEVSLSNAD-----VEAALKCVEDEADYM------A 1208
+ P KT + ++ L++A+ +E LK +E+ D
Sbjct: 794 HDILNFGAPEVYKTQDISSISDEDIDIILADAEKRTIEIEKKLKNLENIFDLTNISLDGG 853
Query: 1209 LKRAEQEEAVDNQEFTEEAVGRPEDDELVIEDTVRTDEPTDQG 1251
L E ++E T+E +E ++E + D + G
Sbjct: 854 LNMYNDLEKEASEESTDEEDSSGSGEETILEGSGNNDIVEENG 896
Score = 53 (23.7 bits), Expect = 5.7e-95, Sum P(3) = 5.7e-95
Identities = 12/24 (50%), Positives = 16/24 (66%)
Query: 53 KKKALDKQLEFLLGQTERYSSMLA 76
K L ++LE LL QT+RY+ LA
Sbjct: 247 KPNYLQEKLEQLLAQTKRYTEKLA 270
Score = 39 (18.8 bits), Expect = 1.0e-54, Sum P(3) = 1.0e-54
Identities = 13/51 (25%), Positives = 21/51 (41%)
Query: 1153 FFKKLDPMELFSGHRTLPMKTMQKEKAINNGNEVSLSNADVEAALKCVEDE 1203
F KK P ++ + T K K + G + N +VE + V+ E
Sbjct: 1146 FIKKNFPEKINNNDTNNNKSTTLKNKKLKKGKQTK--NVNVEKDIASVDIE 1194
>UNIPROTKB|Q8IIW0 [details] [associations]
symbol:PF11_0053 "PfSNF2L" species:36329 "Plasmodium
falciparum 3D7" [GO:0006338 "chromatin remodeling" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0008026 "ATP-dependent helicase activity"
evidence=ISS] [GO:0008094 "DNA-dependent ATPase activity"
evidence=ISS] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR009057 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0006355 GO:GO:0003677
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0006338 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0016585 GO:GO:0008026
EMBL:AE014186 GO:GO:0008094 KO:K01509 RefSeq:XP_001347729.1
ProteinModelPortal:Q8IIW0 IntAct:Q8IIW0 MINT:MINT-1585538
EnsemblProtists:PF11_0053:mRNA GeneID:810605 KEGG:pfa:PF11_0053
EuPathDB:PlasmoDB:PF3D7_1104200 HOGENOM:HOG000282197
ProtClustDB:CLSZ2444952 Uniprot:Q8IIW0
Length = 1426
Score = 621 (223.7 bits), Expect = 5.7e-95, Sum P(3) = 5.7e-95
Identities = 126/301 (41%), Positives = 186/301 (61%)
Query: 446 KFPFLLKFPLREYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTIAMLAHLACEKGIWG 505
K P + ++ YQ GL+WL +Y ++NGILADEMGLGKT+ TI++L +L K I
Sbjct: 313 KQPMNINGTMKPYQLEGLNWLYQLYRFKINGILADEMGLGKTLQTISLLCYLRFNKNIKK 372
Query: 506 PHLIVVPTSVMLNWETEFLKWCPAFKILTYFGSAKERKFKRQGWLKPNSFHVCITTYRLI 565
+I+ P S + NW E KWC K Y+G+ +RK + L + F V +TTY ++
Sbjct: 373 KSIIICPRSTLDNWYEEIKKWCTPMKAFKYYGNKDQRKELNRNLLH-SDFDVLLTTYEIV 431
Query: 566 IQDSKVFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPLQNDLMELWSL 625
I+D W +L++DEAH IKN KS ++ S+ R+L+TGTPL N+L ELWSL
Sbjct: 432 IKDKSALYDIDWFFLVIDEAHRIKNEKSVLSSSVRFLRSENRLLITGTPLHNNLKELWSL 491
Query: 626 MHFLMPHIFQSHQEFKDWFCNPISGMVEGQEKVNKEVVDRLHNVLRPFILRRLKRDVEKQ 685
++FLMP IF + +EF + F N IS + K E++ +LH +L+PF+LRRLK +VE+
Sbjct: 492 LNFLMPKIFDNSEEFDNLF-N-ISKISTNDNK-QSEIITQLHTILKPFMLRRLKVEVEQS 548
Query: 686 LPMKQEHVIYCRLSKRQRNLYEDFIASSETQATLASANFFGMISVIMQLRKVCNHPDLFE 745
LP K+E I+ +SK Q+ LY D ++ + + + M++++MQLRK CNHP LF+
Sbjct: 549 LPPKREIYIFVGMSKLQKKLYSDILSKNIDVLNAMTGSKNQMLNILMQLRKCCNHPYLFD 608
Query: 746 G 746
G
Sbjct: 609 G 609
Score = 423 (154.0 bits), Expect = 5.7e-95, Sum P(3) = 5.7e-95
Identities = 102/283 (36%), Positives = 158/283 (55%)
Query: 984 YFPDRRLIQFDCGKLQELAILLRKLKSDGHRALIFTQMTKMLDILEEFISLYGYTYMRLD 1043
Y LI+ GK+ L LL +LK + R L+F+QMT++LDI++++ Y Y+R+D
Sbjct: 615 YIEGNHLIETS-GKMSLLDKLLPRLKKENSRVLLFSQMTRLLDIIDDYCRWKNYPYLRID 673
Query: 1044 GSTQPEERQTLMQRFNT-NPKIFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQ 1102
GST +ERQ + +FN N K F+F+LSTR+GG+GINL AD VI +DSD+NP MD QA
Sbjct: 674 GSTPGDERQVRINQFNEPNSKYFIFLLSTRAGGIGINLTTADIVILFDSDYNPQMDIQAM 733
Query: 1103 DRCHRIGQTREVHIYRLISESTIEENILKKANQKRALDDLVIQSGGYNTEFFKKLDPMEL 1162
DR HRIGQ + V +YR ++++++EE I+++A +K LD L+IQ G N K+ + EL
Sbjct: 734 DRAHRIGQKKRVIVYRFVTQNSVEEKIVERAAKKLKLDSLIIQKGKLNLNSAKENNKQEL 793
Query: 1163 FSG-HRTLP--MKTMQKEKAINNGNEVSLSNAD-----VEAALKCVEDEADYM------A 1208
+ P KT + ++ L++A+ +E LK +E+ D
Sbjct: 794 HDILNFGAPEVYKTQDISSISDEDIDIILADAEKRTIEIEKKLKNLENIFDLTNISLDGG 853
Query: 1209 LKRAEQEEAVDNQEFTEEAVGRPEDDELVIEDTVRTDEPTDQG 1251
L E ++E T+E +E ++E + D + G
Sbjct: 854 LNMYNDLEKEASEESTDEEDSSGSGEETILEGSGNNDIVEENG 896
Score = 53 (23.7 bits), Expect = 5.7e-95, Sum P(3) = 5.7e-95
Identities = 12/24 (50%), Positives = 16/24 (66%)
Query: 53 KKKALDKQLEFLLGQTERYSSMLA 76
K L ++LE LL QT+RY+ LA
Sbjct: 247 KPNYLQEKLEQLLAQTKRYTEKLA 270
Score = 39 (18.8 bits), Expect = 1.0e-54, Sum P(3) = 1.0e-54
Identities = 13/51 (25%), Positives = 21/51 (41%)
Query: 1153 FFKKLDPMELFSGHRTLPMKTMQKEKAINNGNEVSLSNADVEAALKCVEDE 1203
F KK P ++ + T K K + G + N +VE + V+ E
Sbjct: 1146 FIKKNFPEKINNNDTNNNKSTTLKNKKLKKGKQTK--NVNVEKDIASVDIE 1194
>DICTYBASE|DDB_G0285205 [details] [associations]
symbol:snf2a "SNF2-related protein SNF2a"
species:44689 "Dictyostelium discoideum" [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR017956
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00384
SMART:SM00490 dictyBase:DDB_G0285205 GO:GO:0005524 GO:GO:0003677
EMBL:AAFI02000075 GO:GO:0004386 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 KO:K11647 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 PROSITE:PS51204 RefSeq:XP_638342.2
ProteinModelPortal:Q54NM0 STRING:Q54NM0 PRIDE:Q54NM0
EnsemblProtists:DDB0233441 GeneID:8624967 KEGG:ddi:DDB_G0285205
OMA:HASKHRV Uniprot:Q54NM0
Length = 1604
Score = 629 (226.5 bits), Expect = 7.8e-95, Sum P(4) = 7.8e-95
Identities = 129/302 (42%), Positives = 182/302 (60%)
Query: 455 LREYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTIAMLAHLACEKGIWGPHLIVVPTS 514
L+EYQ GL+WL+++Y + LNGILADEMGLGKT+ TIA ++ L + P L+V P S
Sbjct: 624 LKEYQVTGLEWLISLYTRNLNGILADEMGLGKTVQTIAFISFLYERMNVREPFLVVAPLS 683
Query: 515 VMLNWETEFLKWCPAFKILTYFGSAKERKFKRQGWLKPNSFHVCITTYRLIIQDSKVFKR 574
+ NW +EF +W P ++ Y G ER+ + + N+F V IT++ II+D K R
Sbjct: 684 TISNWVSEFARWSPKLHVIVYKGKQDERR-ETARTIPRNAFCVVITSFEYIIKDRKTLGR 742
Query: 575 KKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPLQNDLMELWSLMHFLMPHIF 634
W Y+I+DE H IKN S+ L ++S+ R+LLTGTPLQNDL ELW+L++FL+P IF
Sbjct: 743 VHWIYIIIDEGHRIKNKNSKLSVQLRQYHSRNRLLLTGTPLQNDLGELWALLNFLLPTIF 802
Query: 635 QSHQEFKDWFCNPISGMVEGQEKVNKE----VVDRLHNVLRPFILRRLKRDVEKQLPMKQ 690
S F++WF P + VN+E +++RLH VLR F+LRRLK DVE QLP K+
Sbjct: 803 NSADTFQNWFNAPFQAKGKNLINVNEEESLIIINRLHQVLRFFLLRRLKSDVESQLPDKK 862
Query: 691 EHVIYCRLSKRQRNLYEDFIA-------SSETQATLASANFFGMISVIMQLRKVCNHPDL 743
E VI C +S Q +Y + + G +++ QL+K+CNHP L
Sbjct: 863 EKVIKCNMSALQIAMYRSLVEYGVLPIDPDSKEGRSGRLKMKGFNNIVKQLQKICNHPYL 922
Query: 744 FE 745
F+
Sbjct: 923 FK 924
Score = 433 (157.5 bits), Expect = 7.8e-95, Sum P(4) = 7.8e-95
Identities = 83/157 (52%), Positives = 115/157 (73%)
Query: 996 GKLQELAILLRKLKSDGHRALIFTQMTKMLDILEEFISLYGYTYMRLDGSTQPEERQTLM 1055
GK + +L K+ + HR LIFTQMT++++++EE+ SL +T++RLDGST+PEER L+
Sbjct: 938 GKFDTMDQILTKMHASKHRVLIFTQMTEVINLMEEYFSLKEWTFLRLDGSTKPEERAHLV 997
Query: 1056 QRFNTNPKIF-LFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQDRCHRIGQTREV 1114
+N F +F+LST +GG+G+NL ADTVI +DSDWNP MD QAQDRCHRIGQT V
Sbjct: 998 VEWNRPDSPFWIFVLSTHAGGLGMNLQTADTVIIFDSDWNPQMDLQAQDRCHRIGQTNSV 1057
Query: 1115 HIYRLISESTIEENILKKANQKRALDDLVIQSGGYNT 1151
++RLIS ++IEE IL +A K +D +IQ+G +NT
Sbjct: 1058 SVFRLISANSIEEKILGRATDKLEIDAKIIQAGMFNT 1094
Score = 47 (21.6 bits), Expect = 7.8e-95, Sum P(4) = 7.8e-95
Identities = 11/28 (39%), Positives = 17/28 (60%)
Query: 315 DSNNYIDEIALLQKESEIPVEELLARYR 342
++NN +EI L KE E+ E+ + R R
Sbjct: 265 NNNNNNNEIETLTKEEELEKEKEIQRLR 292
Score = 46 (21.3 bits), Expect = 2.2e-94, Sum P(5) = 2.2e-94
Identities = 15/54 (27%), Positives = 30/54 (55%)
Query: 55 KALDKQLEFLLGQTERYSSMLAENLVDSHKPVQQSPMREQPGIQYKEA--DENG 106
K +++LE LLG+T+ S + + L++ + +++ E+ Q +E D NG
Sbjct: 508 KTKNERLEMLLGETDSLLSSIHQ-LMEKEQTEKRARELEEELKQNEEQLNDHNG 560
Score = 43 (20.2 bits), Expect = 1.7e-94, Sum P(5) = 1.7e-94
Identities = 12/40 (30%), Positives = 19/40 (47%)
Query: 1233 DDELVIEDTVRTDEPTDQGGCMTANNDNGMMLTGNDPKEE 1272
DDEL ++ + +D+ + NNDN N+ EE
Sbjct: 1269 DDELD-DEGISSDDDDNNINNNNNNNDNNNKNNNNNDDEE 1307
Score = 43 (20.2 bits), Expect = 1.7e-94, Sum P(5) = 1.7e-94
Identities = 19/82 (23%), Positives = 37/82 (45%)
Query: 1181 NNGNEVSLSNADVE--AALKCVEDEADYMALKRAEQEEAVDNQEFTEEAVGRPEDDELVI 1238
+N N+ + +N D E A K + + +R +Q + ++ E D+++
Sbjct: 1294 DNNNKNNNNNDDEETGAIQKQIVERRRATPQQRKQQRQQQQEKQNHENNSDNENQDDIIQ 1353
Query: 1239 EDTVRTDEPTDQGGCMTANNDN 1260
D D PT+ G ++NN+N
Sbjct: 1354 VD----DHPTN-GIENSSNNNN 1370
Score = 41 (19.5 bits), Expect = 1.7e-94, Sum P(5) = 1.7e-94
Identities = 12/38 (31%), Positives = 21/38 (55%)
Query: 1655 DNSINEKTSNVGSGKALLKVTEDNVRTLLNVAAEQEDN 1692
+N+ NEK +N +G+ +++NV NVA+ N
Sbjct: 1467 NNNNNEKNNN-SNGEPSENGSQENVNGNGNVASTAATN 1503
Score = 40 (19.1 bits), Expect = 7.8e-95, Sum P(4) = 7.8e-95
Identities = 11/44 (25%), Positives = 19/44 (43%)
Query: 1230 RPEDDELVIE-DTVRTDEPTDQGGCMTANNDNGMMLTGNDPKEE 1272
+P L+ E +T ++ D G NN+N N+ E+
Sbjct: 1430 KPSKKSLMSETETSDNEQSMDSGDNSNNNNNNNNSNNNNNNNEK 1473
Score = 39 (18.8 bits), Expect = 4.5e-94, Sum P(5) = 4.5e-94
Identities = 10/63 (15%), Positives = 30/63 (47%)
Query: 1206 YMALKRAEQEEAVDNQEFTEEAVGRPEDDELVIEDTVRTDEPTDQGGCMTANNDNGMMLT 1265
++ K+ + ++ + E +++ G+ + +D +D+ D G + ++DN +
Sbjct: 1230 HLEAKKLKNGKSKKDGEKSKKKKGKSRGRKNKSDDEDSSDDELDDEGISSDDDDNNINNN 1289
Query: 1266 GND 1268
N+
Sbjct: 1290 NNN 1292
Score = 39 (18.8 bits), Expect = 3.1e-32, Sum P(4) = 3.1e-32
Identities = 12/45 (26%), Positives = 23/45 (51%)
Query: 646 NPISGMVEGQEKVNKEVVDRLHNVLRPFILRR-LKRDVE--KQLP 687
N I + + +E ++ + RL ++ +P I + + VE K LP
Sbjct: 271 NEIETLTKEEELEKEKEIQRLRDLQKPIIYKSCIPASVENIKGLP 315
Score = 37 (18.1 bits), Expect = 7.3e-94, Sum P(5) = 7.3e-94
Identities = 11/42 (26%), Positives = 18/42 (42%)
Query: 1151 TEFFKKLDPMELFSGHRTLPMKTMQKEKAINNGNEVSLSNAD 1192
T +KLD ++ S P K + + NE S+ + D
Sbjct: 1412 TPIKRKLDDLKGKSDDSPKPSKKSLMSETETSDNEQSMDSGD 1453
Score = 37 (18.1 bits), Expect = 7.3e-94, Sum P(5) = 7.3e-94
Identities = 10/50 (20%), Positives = 22/50 (44%)
Query: 1211 RAEQEEAVDNQEFTEEAVGRPEDDELVIEDTVRTDEPTDQGGCMTANNDN 1260
+++ E++ D+ E +E + +DD + + D NND+
Sbjct: 1261 KSDDEDSSDD-ELDDEGISSDDDDNNINNNNNNNDNNNKNNN----NNDD 1305
>ZFIN|ZDB-GENE-030131-5964 [details] [associations]
symbol:smarca2 "SWI/SNF related, matrix
associated, actin dependent regulator of chromatin, subfamily a,
member 2" species:7955 "Danio rerio" [GO:0016817 "hydrolase
activity, acting on acid anhydrides" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0016818 "hydrolase activity, acting on acid
anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001487 InterPro:IPR001650
InterPro:IPR006576 InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271
Pfam:PF00439 Pfam:PF07533 Pfam:PF08880 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297 SMART:SM00490
SMART:SM00592 SMART:SM00951 ZFIN:ZDB-GENE-030131-5964 GO:GO:0005524
GO:GO:0005634 GO:GO:0006355 GO:GO:0003677 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359 KO:K11647
InterPro:IPR013999 InterPro:IPR014012 InterPro:IPR006562
Pfam:PF07529 SMART:SM00573 PROSITE:PS51204 CTD:6595
HOVERGEN:HBG056636 EMBL:BC060676 IPI:IPI00483012 RefSeq:NP_997881.1
UniGene:Dr.93531 ProteinModelPortal:Q6P9P2 SMR:Q6P9P2 STRING:Q6P9P2
GeneID:334032 KEGG:dre:334032 InParanoid:Q6P9P2 NextBio:20810237
ArrayExpress:Q6P9P2 Uniprot:Q6P9P2
Length = 1568
Score = 632 (227.5 bits), Expect = 7.8e-95, Sum P(4) = 7.8e-95
Identities = 132/308 (42%), Positives = 191/308 (62%)
Query: 449 FLLKFPLREYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTIAMLAHLACEKGIWGPHL 508
FL+ L++YQ GL+W+V++Y LNGILADEMGLGKTI TI ++ +L K + GP+L
Sbjct: 720 FLINGTLKQYQIQGLEWMVSLYNNNLNGILADEMGLGKTIQTIGLITYLMELKRLNGPYL 779
Query: 509 IVVPTSVMLNWETEFLKWCPAFKILTYFGSAKERKFKRQGWLKPNSFHVCITTYRLIIQD 568
I+VP S + NW E KW P+ + Y G+ R+ L+ F+V ITTY II+D
Sbjct: 780 IIVPLSTLSNWVYELDKWAPSIVKIAYKGTPSMRR-SLVPQLRSGKFNVLITTYEYIIKD 838
Query: 569 SKVFKRKKWKYLILDEAHLIKNWKSQRWQTL-LNFNSKRRILLTGTPLQNDLMELWSLMH 627
+ + +WKY+I+DE H +KN + Q L ++ + RR+LLTGTPLQN L ELW+L++
Sbjct: 839 KHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRLLLTGTPLQNKLPELWALLN 898
Query: 628 FLMPHIFQSHQEFKDWFCNPISGMVEGQEKVNKE----VVDRLHNVLRPFILRRLKRDVE 683
FL+P IF+S F+ WF P + M + +N+E ++ RLH VLRPF+LRRLK++VE
Sbjct: 899 FLLPTIFKSCSTFEQWFNAPFA-MTGERVDLNEEETILIIRRLHKVLRPFLLRRLKKEVE 957
Query: 684 KQLPMKQEHVIYCRLSKRQRNLYEDF------IASSETQATLASANFFGMISVIMQLRKV 737
QLP K E+VI C +S Q+ LY + + +++ IMQL+K+
Sbjct: 958 SQLPEKVEYVIKCDMSAIQKVLYRHMQGKGILLTDGSEKDKKGKGGAKTLMNTIMQLKKI 1017
Query: 738 CNHPDLFE 745
CNHP +F+
Sbjct: 1018 CNHPYMFQ 1025
Score = 394 (143.8 bits), Expect = 7.8e-95, Sum P(4) = 7.8e-95
Identities = 75/156 (48%), Positives = 108/156 (69%)
Query: 996 GKLQELAILLRKLKSDGHRALIFTQMTKMLDILEEFISLYGYTYMRLDGSTQPEERQTLM 1055
GK + L +L KLK+ HR L+F QMT ++ ILE++ + Y+RLDG+T+ E+R L+
Sbjct: 1052 GKFELLDRILPKLKATNHRVLLFCQMTSLMTILEDYFGYRNFLYLRLDGTTKSEDRAMLL 1111
Query: 1056 QRFNTN-PKIFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQDRCHRIGQTREV 1114
++FN + F+F+LSTR+GG+G+NL ADTV+ +DSDWNP D QAQDR HRIGQ EV
Sbjct: 1112 KKFNEEGSQYFIFLLSTRAGGLGLNLQAADTVVIFDSDWNPHQDLQAQDRAHRIGQQNEV 1171
Query: 1115 HIYRLISESTIEENILKKANQKRALDDLVIQSGGYN 1150
+ RL + +++EE IL A K +D VIQ+G ++
Sbjct: 1172 RVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFD 1207
Score = 80 (33.2 bits), Expect = 7.8e-95, Sum P(4) = 7.8e-95
Identities = 31/102 (30%), Positives = 50/102 (49%)
Query: 25 NISKDVKKFWMKIEKLVLYKHQMEVDVRKKKALD----KQLEFLLGQTERYSSMLAENLV 80
N ++ KK +IEK + + E + +K +D K+L +LL QT+ Y + L E LV
Sbjct: 489 NTEREQKKETERIEKERMRRLMAEDEEGYRKLIDQKKDKRLAYLLQQTDEYVANLTE-LV 547
Query: 81 DSHKPVQQSPMREQPGIQYK-EA-DENGAEEPGVQSKEADED 120
HK Q + +++ + K EA D G G + DE+
Sbjct: 548 YEHKAAQAAKEKKKKRKKKKKEAGDAEGMGAIGPDGEPIDEN 589
Score = 42 (19.8 bits), Expect = 7.8e-95, Sum P(4) = 7.8e-95
Identities = 14/76 (18%), Positives = 33/76 (43%)
Query: 1886 KHKLSLSDSVKCPKSKLRKTS-MEHSEIQHSSPEPVSNQSVATKDANLRFDLIQEAWLED 1944
K K L + + P L+ + +E + + S +D + L ++ WL
Sbjct: 1271 KRKPRLMEEDELPSWILKDDAEVERLTCEEEEEKIFGRGSRHRRDVDYSDALTEKQWLRA 1330
Query: 1945 MDGGRLSCMDQDLSLE 1960
++ G L +++++ L+
Sbjct: 1331 IEDGNLEEIEEEIRLK 1346
Score = 42 (19.8 bits), Expect = 7.8e-95, Sum P(4) = 7.8e-95
Identities = 21/125 (16%), Positives = 54/125 (43%)
Query: 1154 FKKLDPMELFSGHRTLPMKTMQKEKAI--NNGNEVSLSNADV---EAALKCVEDEADYMA 1208
FKK+ E H+ + ++K+ + +N +L + + L+ V A
Sbjct: 1433 FKKIK--ERVRSHKYRSVSDLEKDVMLLCHNAQTYNLEGSQIYEDSIVLQSVFKSAR-QK 1489
Query: 1209 LKRAEQEEAVDNQEFTEEAVGRPEDDELVIEDTVRTDEPTDQGGCMTANNDNGMMLTGND 1268
+ R E ++ D+ + +E+ + ++ I+ + R + D+G + +++ +D
Sbjct: 1490 IAREESDDESDDDDEEDESEEESKSVKVKIKLSKRDERGQDKGKRRPSRGKAKPVVSDDD 1549
Query: 1269 PKEER 1273
E++
Sbjct: 1550 SDEDQ 1554
Score = 42 (19.8 bits), Expect = 7.4e-91, Sum P(4) = 7.4e-91
Identities = 13/42 (30%), Positives = 21/42 (50%)
Query: 81 DSHKPVQQSPMREQ-PGIQYKEADENGAEEPGVQSKEADEDD 121
D+ K Q E PG Y+ A + +EE G +E D+++
Sbjct: 612 DAPKSSQLEAWLEMNPG--YEVAPRSDSEESGSDFEEEDDEE 651
Score = 40 (19.1 bits), Expect = 4.0e-32, Sum P(4) = 4.0e-32
Identities = 9/19 (47%), Positives = 11/19 (57%)
Query: 217 HVQGNGNDLLAGSKLDTSG 235
H+QG G L GS+ D G
Sbjct: 982 HMQGKGILLTDGSEKDKKG 1000
Score = 39 (18.8 bits), Expect = 1.6e-94, Sum P(4) = 1.6e-94
Identities = 7/21 (33%), Positives = 14/21 (66%)
Query: 1215 EEAVDNQEFTEEAVGRPEDDE 1235
+++ ++QE E++ G DDE
Sbjct: 1548 DDSDEDQEDNEQSEGSQSDDE 1568
>CGD|CAL0003962 [details] [associations]
symbol:orf19.239 species:5476 "Candida albicans" [GO:0016586
"RSC complex" evidence=IEA] [GO:0007059 "chromosome segregation"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0031055 "chromatin remodeling at
centromere" evidence=IEA] [GO:0006337 "nucleosome disassembly"
evidence=IEA] [GO:0016584 "nucleosome positioning" evidence=IEA]
[GO:0006302 "double-strand break repair" evidence=IEA] [GO:0006368
"transcription elongation from RNA polymerase II promoter"
evidence=IEA] [GO:0007126 "meiosis" evidence=IEA] [GO:0007010
"cytoskeleton organization" evidence=IEA] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=IEA] [GO:0000086
"G2/M transition of mitotic cell cycle" evidence=IEA] [GO:0015616
"DNA translocase activity" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0070577 "histone acetyl-lysine binding"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001487
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 Pfam:PF00439
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297
SMART:SM00490 CGD:CAL0003962 GO:GO:0005524 GO:GO:0003677
GO:GO:0004386 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 Gene3D:1.20.920.10 SUPFAM:SSF47370
EMBL:AACQ01000027 EMBL:AACQ01000026 InterPro:IPR014012
PROSITE:PS51204 KO:K11786 RefSeq:XP_719938.1 RefSeq:XP_720068.1
ProteinModelPortal:Q5AEM9 STRING:Q5AEM9 GeneID:3638290
GeneID:3638351 KEGG:cal:CaO19.239 KEGG:cal:CaO19.7869
Uniprot:Q5AEM9
Length = 1303
Score = 640 (230.4 bits), Expect = 2.5e-94, Sum P(5) = 2.5e-94
Identities = 135/301 (44%), Positives = 195/301 (64%)
Query: 455 LREYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTIAMLAHLACEKGIWGPHLIVVPTS 514
L+EYQ GL+W+V++Y LNGILADEMGLGKTI +I+++ +L EK LI+VP S
Sbjct: 501 LKEYQMKGLEWMVSLYNNHLNGILADEMGLGKTIQSISLVTYLI-EKKHENKFLIIVPLS 559
Query: 515 VMLNWETEFLKWCPAFKILTYFGSAKERKFKRQGWLKPNSFHVCITTYRLIIQDSKVFKR 574
+ NW EF KW P+ K++ Y GS ++R+ Q ++ +F V +TTY +I++ + +
Sbjct: 560 TITNWTLEFEKWAPSIKVIVYKGSQQQRR-SLQPDIRYGNFQVLLTTYEYVIRERPMLAK 618
Query: 575 KKWKYLILDEAHLIKNWKSQRWQTLLNF-NSKRRILLTGTPLQNDLMELWSLMHFLMPHI 633
+ ++I+DE H +KN +S+ QTL + +K R++LTGTPLQN+L ELW+L++F++P I
Sbjct: 619 FHYSHMIIDEGHRMKNAQSKLSQTLRTYYKTKNRLILTGTPLQNNLPELWALLNFVLPGI 678
Query: 634 FQSHQEFKDWFCNPIS--GMVEGQEKVNKE---VVDRLHNVLRPFILRRLKRDVEKQLPM 688
F S + F DWF P + G E E +E V+ RLH VLRPF+LRRLK+DVEK LP
Sbjct: 679 FNSVKSFDDWFNTPFANTGAQEKIELTEEESLLVIRRLHKVLRPFLLRRLKKDVEKDLPD 738
Query: 689 KQEHVIYCRLSKRQRNLYEDFIASSE--TQATL--ASANFFGMISVIMQLRKVCNHPDLF 744
K E V+ C LS Q LY+ + + A + A + G+ + IMQLRK+CNHP +F
Sbjct: 739 KVEKVLKCNLSGLQYVLYQQMLKHNALFVGADVGGAKSGIKGLNNKIMQLRKICNHPFVF 798
Query: 745 E 745
E
Sbjct: 799 E 799
Score = 415 (151.1 bits), Expect = 2.5e-94, Sum P(5) = 2.5e-94
Identities = 107/295 (36%), Positives = 162/295 (54%)
Query: 996 GKLQELAILLRKLKSDGHRALIFTQMTKMLDILEEFISLYGYTYMRLDGSTQPEERQTLM 1055
GK + L +L K K GHR L+F QMT+++DI+E+F+ Y+RLDGST+ EERQ ++
Sbjct: 820 GKFELLDRVLPKFKKSGHRVLMFFQMTQIMDIMEDFLRWKDMKYLRLDGSTKAEERQDML 879
Query: 1056 QRFNT-NPKIFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQDRCHRIGQTREV 1114
+ FN + F F+LSTR+GG+G+NL ADTVI +D+DWNP D QAQDR HRIGQ EV
Sbjct: 880 KVFNAPDSDYFCFLLSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQKNEV 939
Query: 1115 HIYRLISESTIEENILKKANQKRALDDLVIQSGGYNTEFFKKLDPMELFSGHRTLPMKTM 1174
I RLI+ ++EE IL++A+QK +D VIQ+G ++ + + E F R L
Sbjct: 940 RILRLITNDSVEEVILERAHQKLDIDGKVIQAGKFDNK--STAEEQEAFL-KRLLEADA- 995
Query: 1175 QKEKAINNGNEVSLSNADVEAALKCVEDEADYMALKRAEQEEAVDNQEFTEEAVGRPEDD 1234
A N N+ SL + ++ L E+E A ++E + + + + E
Sbjct: 996 --NGADNEEND-SLDDDELNEILARSEEEKVLFA--SMDEERKSEKVPYKSRLIEKDELP 1050
Query: 1235 ELVIEDTVRTDEPTDQGGCMTANNDNGMMLTGNDPKEERALTFAAKEDDVDMLAD 1289
+ ED E ++ ++ D + + EE+ L A +DD D + +
Sbjct: 1051 AVFTEDISHHFEKKEKE--LSKMRDKKRVRYDDGLSEEQWLK--AMDDDNDTVEE 1101
Score = 48 (22.0 bits), Expect = 6.1e-56, Sum P(4) = 6.1e-56
Identities = 13/57 (22%), Positives = 24/57 (42%)
Query: 1836 NHHLKDSQVAENRFRDAARACIEDSLG---WASSAFPANDAKLRSVP-KSQSLGKHK 1888
+HH + + ++ RD R +D L W + ND ++ K + + K K
Sbjct: 1058 SHHFEKKEKELSKMRDKKRVRYDDGLSEEQWLKAMDDDNDTVEEAIKRKEERIAKRK 1114
Score = 46 (21.3 bits), Expect = 2.5e-94, Sum P(5) = 2.5e-94
Identities = 12/52 (23%), Positives = 27/52 (51%)
Query: 1445 SKAVKEEPSVEPMSIDDDFYDEDATFSDAMSPPSTSQKKRKKAELALYDDEE 1496
+KA++E E + D+ ++D F +A P +++R + L D+++
Sbjct: 1116 NKAIREGLLEEDIKDDEVGEEDDEDFEEAAQP--RKRQRRARTPLPHIDNDD 1165
Score = 40 (19.1 bits), Expect = 2.5e-94, Sum P(5) = 2.5e-94
Identities = 12/48 (25%), Positives = 19/48 (39%)
Query: 1944 DMDGGRLSCMDQDLSLETVLSSEIPHNYFPDVISGLDDCSILPDYTDI 1991
+ DG C+ + T L+ E + D+ L + PDY I
Sbjct: 1192 ETDGFTSKCLSV-IDEITALTDETDGHNLSDIFIKLPSRKLYPDYYSI 1238
Score = 39 (18.8 bits), Expect = 2.5e-94, Sum P(5) = 2.5e-94
Identities = 21/89 (23%), Positives = 36/89 (40%)
Query: 183 LQELLKRYAVDKVGRESSAEMGEDEAEPTVVEEGHVQGNGNDLLAGSKLDTSGSLVRRCD 242
L ELL +Y K+ +S+ E E E +G D+ A +KLD L +
Sbjct: 47 LNELLSKYY--KLLFDSNKLKKEFEKS-----EDKSEGKFEDVNAQAKLDIESVLAQVSK 99
Query: 243 EINGGLSISENHLLDIETSQVRDTSKKSG 271
E + + ++ + ++ T K G
Sbjct: 100 EHEEYIKDESEFMQELFSENLKGTIKSEG 128
>UNIPROTKB|Q5FWR0 [details] [associations]
symbol:smarcad1 "SWI/SNF-related matrix-associated
actin-dependent regulator of chromatin subfamily A containing
DEAD/H box 1" species:8364 "Xenopus (Silurana) tropicalis"
[GO:0000729 "DNA double-strand break processing" evidence=ISS]
[GO:0035861 "site of double-strand break" evidence=ISS] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=ISS]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR003892
InterPro:IPR009060 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51140
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0003677 GO:GO:0004386 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0043044 SUPFAM:SSF46934
GO:GO:0000729 HOGENOM:HOG000172362 GO:GO:0035861 KO:K14439
HOVERGEN:HBG055804 OrthoDB:EOG4RV2QW EMBL:AAMC01061573
EMBL:AAMC01061574 EMBL:AAMC01061575 EMBL:BC089242
RefSeq:NP_001015697.1 UniGene:Str.34312 ProteinModelPortal:Q5FWR0
GeneID:548414 KEGG:xtr:548414 Xenbase:XB-GENE-492700
InParanoid:Q5FWR0 Uniprot:Q5FWR0
Length = 1003
Score = 631 (227.2 bits), Expect = 2.3e-92, Sum P(3) = 2.3e-92
Identities = 130/292 (44%), Positives = 184/292 (63%)
Query: 455 LREYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTIAMLAHLACEKGIWGPHLIVVPTS 514
L+ YQ IGL+WL +++ ++N ILADEMGLGKT+ IA LAHL G GPHL+VVP S
Sbjct: 474 LKPYQKIGLNWLALLHKHKVNMILADEMGLGKTVQAIAFLAHLYVT-GDSGPHLVVVPAS 532
Query: 515 VMLNWETEFLKWCPAFKILTYFGSAKERKFKRQGWL-KPNSFHVCITTYRLII---QDSK 570
M NW EF +WCP+ IL Y+GS +ERK R L K F+V +TTY I +D
Sbjct: 533 TMDNWIREFNQWCPSMNILLYYGSQEERKHLRYDILNKVVEFNVIVTTYNCAISSAEDRS 592
Query: 571 VFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPLQNDLMELWSLMHFLM 630
+F+R K + + DE H++KN + R+Q L+ N++ R+LLTGTP+QN+L+EL SL++F+M
Sbjct: 593 LFRRLKLNFAVFDEGHMLKNMSAIRYQHLMTLNARSRLLLTGTPVQNNLLELMSLLNFVM 652
Query: 631 PHIFQSH-QEFKDWFCNPISGMVEGQEKVNKEVVDRLHNVLRPFILRRLKRDVEKQLPMK 689
PH+F S E K F + E Q KE + +++PFILRR+K +V KQLP K
Sbjct: 653 PHMFSSSTSEIKRLFSSKAKSTDE-QTIFEKERIAHAKQIMKPFILRRVKSEVLKQLPPK 711
Query: 690 QEHVIYCRLSKRQRNLYEDFIASSETQATLASANFFGMISVIMQLRKVCNHP 741
Q+ + +C++SK+Q LY D + + N + +V+M LRK+ NHP
Sbjct: 712 QDKIKFCQMSKKQEQLYSDLLNKLKKSIDATEKNS-ELCNVMMHLRKMANHP 762
Score = 384 (140.2 bits), Expect = 2.3e-92, Sum P(3) = 2.3e-92
Identities = 79/166 (47%), Positives = 111/166 (66%)
Query: 984 YFPDRRLIQFDCGKLQELAILLRKLKSDGHRALIFTQMTKMLDILEEFISLYGYTYMRLD 1043
Y ++ LI D GK L LL +K G R ++F+Q T MLDI+E F+ + + Y+RLD
Sbjct: 820 YKLEKELI-LDSGKFNILEKLLSDIKKKGDRVVLFSQFTMMLDIIEVFLRHHQHRYVRLD 878
Query: 1044 GSTQPEERQTLMQRFNTNPKIFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQD 1103
G TQ ER L+ FNT+ IF+F+LST++GG+GINL A+ VI +D D NP D+QA+D
Sbjct: 879 GKTQISERIHLIDEFNTDMDIFIFLLSTKAGGLGINLTSANIVILHDIDCNPYNDKQAED 938
Query: 1104 RCHRIGQTREVHIYRLISESTIEENILKKANQKRALD-DLVIQSGG 1148
RCHR+GQT+EV + +LI + TIEE++LK + QK L+ D+ G
Sbjct: 939 RCHRVGQTKEVKVIKLIGKGTIEESMLKISQQKLRLEQDMTTNDTG 984
Score = 45 (20.9 bits), Expect = 3.6e-30, Sum P(2) = 3.6e-30
Identities = 19/79 (24%), Positives = 36/79 (45%)
Query: 212 VVEEGHVQGNGN--------DLLAGSKLDTSGSLVRR-CDEINGGLSISENHLLDIETSQ 262
V +EGH+ N + L A S+L +G+ V+ E+ L+ H+ TS+
Sbjct: 603 VFDEGHMLKNMSAIRYQHLMTLNARSRLLLTGTPVQNNLLELMSLLNFVMPHMFSSSTSE 662
Query: 263 VRDTSKKSGASTQKQALYD 281
++ ST +Q +++
Sbjct: 663 IKRLFSSKAKSTDEQTIFE 681
Score = 40 (19.1 bits), Expect = 2.3e-92, Sum P(3) = 2.3e-92
Identities = 9/38 (23%), Positives = 19/38 (50%)
Query: 188 KRYAVDKVGRESSAEMGEDEAEPTVVEEGHVQGNGNDL 225
K+ +D+V ++ + + ED+ E +Q + DL
Sbjct: 199 KKKKIDRVSSDNDSSLSEDDWEKQEASVKKLQRHFPDL 236
>UNIPROTKB|F1P5V4 [details] [associations]
symbol:HELLS "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0001655 "urogenital system development"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005721 "centromeric
heterochromatin" evidence=IEA] [GO:0006346 "methylation-dependent
chromatin silencing" evidence=IEA] [GO:0010216 "maintenance of DNA
methylation" evidence=IEA] [GO:0031508 "centromeric heterochromatin
assembly" evidence=IEA] [GO:0043066 "negative regulation of
apoptotic process" evidence=IEA] [GO:0046651 "lymphocyte
proliferation" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005634 GO:GO:0003677 GO:GO:0003682
GO:GO:0004386 GO:GO:0005721 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0031508 GO:GO:0010216 OMA:ETFYTAI
GO:GO:0006346 GO:GO:0046651 GeneTree:ENSGT00550000075106
EMBL:AADN02027839 EMBL:AADN02027838 IPI:IPI00823178
Ensembl:ENSGALT00000008749 ArrayExpress:F1P5V4 Uniprot:F1P5V4
Length = 839
Score = 526 (190.2 bits), Expect = 3.2e-92, Sum P(4) = 3.2e-92
Identities = 112/263 (42%), Positives = 164/263 (62%)
Query: 455 LREYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTIAMLAHLACEKGIWGPHLIVVPTS 514
+R YQ G++WL ++E +NGILADEMGLGKTI IA +A L E+G+ GP L+ P S
Sbjct: 222 MRWYQVEGMEWLRMLWENGINGILADEMGLGKTIQCIATIA-LMVERGVPGPFLVCGPLS 280
Query: 515 VMLNWETEFLKWCPAFKILTYFGSAKERK------FKRQGWLKPNSFHVCITTYRLIIQD 568
+ NW +EF ++ P ++ Y G+ +ER+ RQG LK + V IT++ + ++D
Sbjct: 281 TLPNWMSEFKRFTPEIPLMLYHGAQQERRKLVRKIHGRQGSLKIHP--VVITSFEIAMRD 338
Query: 569 SKVFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPLQNDLMELWSLMHF 628
+ WKYLI+DE H IKN + + L FN+ ++LLTGTPLQN+L ELWSL++F
Sbjct: 339 RNALQSCFWKYLIVDEGHRIKNMNCRLIRELKRFNADNKLLLTGTPLQNNLAELWSLLNF 398
Query: 629 LMPHIFQSHQEFKDWFCNPISGMVEGQEKV---NKE--VVDRLHNVLRPFILRRLKRDVE 683
L+P +F + F+ WF I+ + E E + KE ++ LH +L PF+LRRLK DV
Sbjct: 399 LLPDVFDDLKSFESWF--DITSITETAEDIIAKEKEQNILHMLHQILTPFLLRRLKSDVA 456
Query: 684 KQLPMKQEHVIYCRLSKRQRNLY 706
++P K+E V+Y L+K+Q Y
Sbjct: 457 LEVPPKREVVVYAPLAKKQETFY 479
Score = 470 (170.5 bits), Expect = 3.2e-92, Sum P(4) = 3.2e-92
Identities = 110/274 (40%), Positives = 162/274 (59%)
Query: 962 KCSEVLSPLLFPIRPAIVRRQVYFPDRRLIQFDCGKLQELAILLRKLKSDGHRALIFTQM 1021
KC + +P+ PA + +V D L++ + GK L +L +LK GH+ L+F+QM
Sbjct: 569 KCCNHPYLIEYPLDPATQQFKV---DEDLVK-NSGKFLLLDRMLPELKKRGHKVLMFSQM 624
Query: 1022 TKMLDILEEFISLYGYTYMRLDGSTQPEERQTLMQRFNTNPKIFLFILSTRSGGVGINLV 1081
T MLDIL ++ L G+ + RLDGS +R+ M +FN +P++FLF++STR+GG+GINL
Sbjct: 625 TMMLDILMDYCYLRGFKFSRLDGSMSYSDREENMHQFNNDPEVFLFLVSTRAGGLGINLT 684
Query: 1082 GADTVIFYDSDWNPAMDQQAQDRCHRIGQTREVHIYRLISESTIEENILKKANQKRALDD 1141
ADTVI YDSDWNP D QAQDRCHRIGQT+ V +YRL++ +TI++ I+++A KR L+
Sbjct: 685 AADTVIIYDSDWNPQSDLQAQDRCHRIGQTKPVVVYRLVTANTIDQKIVERAAAKRKLEK 744
Query: 1142 LVIQS----GGYNTEFFKK--LDPMELFSGHRTLPMKTMQKEKAINNGNEVSLSNADVEA 1195
L+I GG + K LDP EL +K+ E+ + E +S+ D+E
Sbjct: 745 LIIHKNQFKGGKSGLAQSKSCLDPQELIE-----LLKSRDYEREVKGSKEKVISDKDLEL 799
Query: 1196 ALKCVEDEADYMALKRAEQEEAVDNQEFTEEAVG 1229
L D D M ++E + + EE+ G
Sbjct: 800 LLDR-SDLIDQMKTSETVKKEKMGVFKVLEESSG 832
Score = 57 (25.1 bits), Expect = 3.2e-92, Sum P(4) = 3.2e-92
Identities = 10/17 (58%), Positives = 13/17 (76%)
Query: 729 SVIMQLRKVCNHPDLFE 745
+++M LRK CNHP L E
Sbjct: 562 NIMMLLRKCCNHPYLIE 578
Score = 44 (20.5 bits), Expect = 3.2e-92, Sum P(4) = 3.2e-92
Identities = 20/90 (22%), Positives = 37/90 (41%)
Query: 38 EKLVLYKHQMEVDVRKKKALDKQLEFLLGQTERYSSMLAENLVDSHKPVQQ--SPMREQP 95
E+ ++ K + D + K+L+ LL ++ YS L + Q+ + ++
Sbjct: 44 ERQMMEKARSAWDRESSEMRYKRLQHLLEKSNIYSKFLLTKMEQQQLEEQKRKEKLEKKR 103
Query: 96 GIQYKEAD-EN---GAEEPGVQSKEADEDD 121
+ K A +N G EE K+ DD
Sbjct: 104 EMMLKSAKGQNPADGKEEKSATKKKRGRDD 133
>SGD|S000000449 [details] [associations]
symbol:ISW1 "ATPase subunit of imitation-switch (ISWI) class
chromatin remodelers" species:4932 "Saccharomyces cerevisiae"
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0006369
"termination of RNA polymerase II transcription" evidence=IGI]
[GO:0034401 "regulation of transcription by chromatin organization"
evidence=IMP] [GO:0016887 "ATPase activity" evidence=IDA]
[GO:0031491 "nucleosome binding" evidence=IEA;IDA] [GO:0003677 "DNA
binding" evidence=IEA;IDA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0030874 "nucleolar chromatin" evidence=IDA] [GO:0000182 "rDNA
binding" evidence=IDA] [GO:0006363 "termination of RNA polymerase I
transcription" evidence=IGI] [GO:0070870 "heterochromatin
maintenance involved in chromatin silencing" evidence=IGI;IMP]
[GO:0016587 "Isw1 complex" evidence=IPI] [GO:0006354 "DNA-dependent
transcription, elongation" evidence=IMP;IDA] [GO:0006338 "chromatin
remodeling" evidence=IEA;IGI;IMP;IPI] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA;IDA] [GO:0016818 "hydrolase activity, acting
on acid anhydrides, in phosphorus-containing anhydrides"
evidence=IEA] [GO:0043044 "ATP-dependent chromatin remodeling"
evidence=IEA] [GO:0001178 "regulation of transcriptional start site
selection at RNA polymerase II promoter" evidence=IGI] [GO:0016568
"chromatin modification" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0016584 "nucleosome positioning"
evidence=IGI;IMP] InterPro:IPR000330 InterPro:IPR001005
InterPro:IPR001650 InterPro:IPR009057 InterPro:IPR015194
InterPro:IPR015195 Pfam:PF00176 Pfam:PF00271 Pfam:PF09110
Pfam:PF09111 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00717 SGD:S000000449 GO:GO:0005524 GO:GO:0006200
GO:GO:0045944 EMBL:BK006936 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0006338 InterPro:IPR017884 PROSITE:PS51293 GO:GO:0004386
GO:GO:0034401 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0031491 GO:GO:0043044 GO:GO:0016584
GO:GO:0006363 GO:GO:0006354 GO:GO:0006369
GeneTree:ENSGT00670000098110 GO:GO:0030874 GO:GO:0000182
GO:GO:0001178 GO:GO:0070870 GO:GO:0016587 PDB:2Y9Y PDB:2Y9Z
PDBsum:2Y9Y PDBsum:2Y9Z HOGENOM:HOG000192862 SUPFAM:SSF101224
EMBL:Z36114 PIR:S46122 RefSeq:NP_009804.1 ProteinModelPortal:P38144
SMR:P38144 DIP:DIP-6601N IntAct:P38144 MINT:MINT-614918
STRING:P38144 PaxDb:P38144 PeptideAtlas:P38144 EnsemblFungi:YBR245C
GeneID:852547 KEGG:sce:YBR245C CYGD:YBR245c OMA:LEMITHG
OrthoDB:EOG48SM27 EvolutionaryTrace:P38144 NextBio:971628
Genevestigator:P38144 GermOnline:YBR245C Uniprot:P38144
Length = 1129
Score = 589 (212.4 bits), Expect = 9.2e-92, Sum P(3) = 9.2e-92
Identities = 125/303 (41%), Positives = 182/303 (60%)
Query: 448 PFLLKFPLREYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTIAMLAHLACEKGIWGPH 507
P + LR YQ G++WLV++++ ++ GILADEMGLGKT+ TI+ L +L + I GP
Sbjct: 189 PAYVNGQLRPYQIQGVNWLVSLHKNKIAGILADEMGLGKTLQTISFLGYLRYIEKIPGPF 248
Query: 508 LIVVPTSVMLNWETEFLKWCPAFKILTYFGSAKERKFKRQGWLKPNSFHVCITTYRLIIQ 567
L++ P S + NW E +W P G +ER Q L F V I +Y +II+
Sbjct: 249 LVIAPKSTLNNWLREINRWTPDVNAFILQGDKEERAELIQKKLLGCDFDVVIASYEIIIR 308
Query: 568 DSKVFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPLQNDLMELWSLMH 627
+ K+ W+Y+I+DEAH IKN +S Q L F S+ R+L+TGTPLQN+L ELW+L++
Sbjct: 309 EKSPLKKINWEYIIIDEAHRIKNEESMLSQVLREFTSRNRLLITGTPLQNNLHELWALLN 368
Query: 628 FLMPHIFQSHQEFKDWFCNPISGMVEGQEKVNKEVVDRLHNVLRPFILRRLKRDVEKQLP 687
FL+P IF Q+F DWF + E E+ ++V +LH VL+PF+LRR+K DVE L
Sbjct: 369 FLLPDIFSDAQDFDDWFSS------ESTEEDQDKIVKQLHTVLQPFLLRRIKSDVETSLL 422
Query: 688 MKQEHVIYCRLSKRQRNLYEDFIASSETQATLAS----ANFFGMISVIMQLRKVCNHPDL 743
K+E +Y +S Q+ Y+ I + A S + +++++MQLRK CNHP L
Sbjct: 423 PKKELNLYVGMSSMQKKWYKK-ILEKDLDAVNGSNGSKESKTRLLNIMMQLRKCCNHPYL 481
Query: 744 FEG 746
F+G
Sbjct: 482 FDG 484
Score = 427 (155.4 bits), Expect = 9.2e-92, Sum P(3) = 9.2e-92
Identities = 85/174 (48%), Positives = 119/174 (68%)
Query: 984 YFPDRRLIQFDCGKLQELAILLRKLKSDGHRALIFTQMTKMLDILEEFISLYGYTYMRLD 1043
Y D L+ ++ KLQ L LL+KLK +G R LIF+QM+++LDILE++ Y Y R+D
Sbjct: 491 YTTDEHLV-YNAAKLQVLDKLLKKLKEEGSRVLIFSQMSRLLDILEDYCYFRNYEYCRID 549
Query: 1044 GSTQPEERQTLMQRFNT-NPKIFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQ 1102
GST E+R + +N + K F+F+L+TR+GG+GINL AD V+ YDSDWNP D QA
Sbjct: 550 GSTAHEDRIQAIDDYNAPDSKKFVFLLTTRAGGLGINLTSADVVVLYDSDWNPQADLQAM 609
Query: 1103 DRCHRIGQTREVHIYRLISESTIEENILKKANQKRALDDLVIQSGGYNTEFFKK 1156
DR HRIGQ ++V ++RL++++++EE IL++A QK LD LVIQ T KK
Sbjct: 610 DRAHRIGQKKQVKVFRLVTDNSVEEKILERATQKLRLDQLVIQQN--RTSLKKK 661
Score = 44 (20.5 bits), Expect = 9.2e-92, Sum P(3) = 9.2e-92
Identities = 15/51 (29%), Positives = 28/51 (54%)
Query: 1170 PMKTMQKEKAINNGNEVSLSNA-DVEAALKCVEDEADYMALKRAE-QEEAV 1218
P KT+++ +A ++ D E LK +E+E + +KR + Q+EA+
Sbjct: 916 PGKTLEEVRAYAKAFWSNIERIEDYEKYLKIIENEEE--KIKRVKMQQEAL 964
>CGD|CAL0005422 [details] [associations]
symbol:ISW2 species:5476 "Candida albicans" [GO:0001410
"chlamydospore formation" evidence=IMP] [GO:0030447 "filamentous
growth" evidence=IMP] [GO:0071280 "cellular response to copper ion"
evidence=IMP] [GO:0035690 "cellular response to drug" evidence=IMP]
[GO:0008623 "CHRAC" evidence=IEA] [GO:0060195 "negative regulation
of antisense RNA transcription" evidence=IEA] [GO:0006338
"chromatin remodeling" evidence=IEA] [GO:0000183 "chromatin
silencing at rDNA" evidence=IEA] [GO:0006369 "termination of RNA
polymerase II transcription" evidence=IEA] [GO:0046020 "negative
regulation of transcription from RNA polymerase II promoter by
pheromones" evidence=IEA] [GO:0006348 "chromatin silencing at
telomere" evidence=IEA] [GO:0016584 "nucleosome positioning"
evidence=IEA] [GO:0015616 "DNA translocase activity" evidence=IEA]
[GO:0003697 "single-stranded DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR009057 InterPro:IPR015194 InterPro:IPR015195
Pfam:PF00176 Pfam:PF00271 Pfam:PF09110 Pfam:PF09111 PROSITE:PS51194
SMART:SM00490 SMART:SM00717 CGD:CAL0005422 GO:GO:0005524
GO:GO:0001410 GO:GO:0003677 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0071280 GO:GO:0035690 InterPro:IPR017884 PROSITE:PS51293
GO:GO:0004386 EMBL:AACQ01000074 GO:GO:0030447 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0016585
GO:GO:0031491 GO:GO:0043044 SUPFAM:SSF101224 RefSeq:XP_716066.1
ProteinModelPortal:Q5A310 STRING:Q5A310 GeneID:3642235
KEGG:cal:CaO19.7401 Uniprot:Q5A310
Length = 1056
Score = 599 (215.9 bits), Expect = 5.8e-91, Sum P(5) = 5.8e-91
Identities = 124/310 (40%), Positives = 188/310 (60%)
Query: 443 VRTKFPFLLKF-PLREYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTIAMLAHLACEK 501
V T+ P +K LREYQ GL+WL+++YE RL+GILADEMGLGKT+ TI+ L +L K
Sbjct: 126 VMTESPSYIKEGKLREYQIQGLNWLISLYENRLSGILADEMGLGKTLQTISFLGYLRYIK 185
Query: 502 GIWGPHLIVVPTSVMLNWETEFLKWCPAFKILTYFGSAKERKFKRQGWLKPNSFHVCITT 561
I GP +++VP S + NW EF KW P ++ G ++R + L F V IT+
Sbjct: 186 HIDGPFIVIVPKSTLDNWRREFAKWTPDVNVVVLQGDKEQRASIIKDQLYTAKFDVLITS 245
Query: 562 YRLIIQDSKVFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPLQNDLME 621
+ +I+++ ++ +W+Y+++DEAH IKN S + + F S+ R+L+TGTPLQN+L E
Sbjct: 246 FEMILREKSALQKFRWEYIVVDEAHRIKNEDSSLSKIIRLFYSRNRLLITGTPLQNNLHE 305
Query: 622 LWSLMHFLMPHIFQSHQEFKDWFCNPISGMVEGQEKVNKE--VVDRLHNVLRPFILRRLK 679
LW+L++FL+P +F +F + F N S ++ +EK ++ V LH +L PF+LRR+K
Sbjct: 306 LWALLNFLLPDVFGDSDQFDEAFDNQNSEELDEEEKQRRQDKAVSELHQLLSPFLLRRVK 365
Query: 680 RDVEKQLPMKQEHVIYCRLSKRQRNLYEDFIASSETQATLASANFFG---MISVIMQLRK 736
DVEK L K E +Y ++ Q Y+ + G +++++MQLRK
Sbjct: 366 ADVEKSLLPKIETNVYIGMTDMQVEWYKRLLEKDIDAVNGVVGKREGKTRLLNIVMQLRK 425
Query: 737 VCNHPDLFEG 746
CNHP LF+G
Sbjct: 426 CCNHPYLFDG 435
Score = 414 (150.8 bits), Expect = 5.8e-91, Sum P(5) = 5.8e-91
Identities = 80/165 (48%), Positives = 114/165 (69%)
Query: 984 YFPDRRLIQFDCGKLQELAILLRKLKSDGHRALIFTQMTKMLDILEEFISLYGYTYMRLD 1043
Y D L+ ++ GK+ L +L+K K++G R LIF+QM+++LDILE++ Y Y R+D
Sbjct: 442 YTTDEHLV-YNSGKMIILDKMLKKFKAEGSRVLIFSQMSRVLDILEDYCYFRDYEYCRID 500
Query: 1044 GSTQPEERQTLMQRFNT-NPKIFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQ 1102
GST E+R + +N + + F+F+L+TR+GG+GINL AD VI YDSDWNP D QA
Sbjct: 501 GSTSHEDRIEAIDEYNAPDSEKFIFLLTTRAGGLGINLTSADIVILYDSDWNPQADLQAM 560
Query: 1103 DRCHRIGQTREVHIYRLISESTIEENILKKANQKRALDDLVIQSG 1147
DR HRIGQ ++V ++R ++E IEE +L++A QK LD LVIQ G
Sbjct: 561 DRAHRIGQKKQVKVFRFVTEKAIEEKVLERAAQKLRLDQLVIQQG 605
Score = 48 (22.0 bits), Expect = 5.8e-91, Sum P(5) = 5.8e-91
Identities = 18/49 (36%), Positives = 24/49 (48%)
Query: 1441 LTSESKAVKEEPSVEPMSIDDDFYDEDATFSDAMSPPS-TSQKKRKKAE 1488
L E A K+E S + S+DD F D D F + T +KRK A+
Sbjct: 764 LEREQLAFKKEISYQ-YSVDD-FGDSDEEFLEQDDEDDMTRDEKRKIAQ 810
Score = 39 (18.8 bits), Expect = 5.8e-91, Sum P(5) = 5.8e-91
Identities = 9/21 (42%), Positives = 11/21 (52%)
Query: 1589 SPDVWLPQEDAILCAVVHEYG 1609
S V+ ED L VH+YG
Sbjct: 937 SKRVYSKTEDKFLLYCVHKYG 957
Score = 37 (18.1 bits), Expect = 5.8e-91, Sum P(5) = 5.8e-91
Identities = 13/46 (28%), Positives = 22/46 (47%)
Query: 1885 GKHKLSLSDSVKCPKSKLRKTSMEHSEI--QHSSPEPVSNQSVATK 1928
GK + ++ +S + R S+E S I + SPE + N+ K
Sbjct: 1012 GKKRKAMGES----NNSSRFGSVEPSSINGEKHSPEVIDNEQTVKK 1053
Score = 37 (18.1 bits), Expect = 8.0e-52, Sum P(5) = 8.0e-52
Identities = 11/45 (24%), Positives = 19/45 (42%)
Query: 1273 RALTFAAKEDDVDMLADVKQMXXXXXXXGEAISSFENQLRPIDRY 1317
R L F+ +D+L D + +S E+++ ID Y
Sbjct: 471 RVLIFSQMSRVLDILEDYCYFRDYEYCRIDGSTSHEDRIEAIDEY 515
>UNIPROTKB|Q5A310 [details] [associations]
symbol:ISW2 "Putative uncharacterized protein ISW2"
species:237561 "Candida albicans SC5314" [GO:0001410 "chlamydospore
formation" evidence=IMP] [GO:0030447 "filamentous growth"
evidence=IMP] [GO:0035690 "cellular response to drug" evidence=IMP]
[GO:0071280 "cellular response to copper ion" evidence=IMP]
InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR009057 InterPro:IPR015194 InterPro:IPR015195
Pfam:PF00176 Pfam:PF00271 Pfam:PF09110 Pfam:PF09111 PROSITE:PS51194
SMART:SM00490 SMART:SM00717 CGD:CAL0005422 GO:GO:0005524
GO:GO:0001410 GO:GO:0003677 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0071280 GO:GO:0035690 InterPro:IPR017884 PROSITE:PS51293
GO:GO:0004386 EMBL:AACQ01000074 GO:GO:0030447 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0016585
GO:GO:0031491 GO:GO:0043044 SUPFAM:SSF101224 RefSeq:XP_716066.1
ProteinModelPortal:Q5A310 STRING:Q5A310 GeneID:3642235
KEGG:cal:CaO19.7401 Uniprot:Q5A310
Length = 1056
Score = 599 (215.9 bits), Expect = 5.8e-91, Sum P(5) = 5.8e-91
Identities = 124/310 (40%), Positives = 188/310 (60%)
Query: 443 VRTKFPFLLKF-PLREYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTIAMLAHLACEK 501
V T+ P +K LREYQ GL+WL+++YE RL+GILADEMGLGKT+ TI+ L +L K
Sbjct: 126 VMTESPSYIKEGKLREYQIQGLNWLISLYENRLSGILADEMGLGKTLQTISFLGYLRYIK 185
Query: 502 GIWGPHLIVVPTSVMLNWETEFLKWCPAFKILTYFGSAKERKFKRQGWLKPNSFHVCITT 561
I GP +++VP S + NW EF KW P ++ G ++R + L F V IT+
Sbjct: 186 HIDGPFIVIVPKSTLDNWRREFAKWTPDVNVVVLQGDKEQRASIIKDQLYTAKFDVLITS 245
Query: 562 YRLIIQDSKVFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPLQNDLME 621
+ +I+++ ++ +W+Y+++DEAH IKN S + + F S+ R+L+TGTPLQN+L E
Sbjct: 246 FEMILREKSALQKFRWEYIVVDEAHRIKNEDSSLSKIIRLFYSRNRLLITGTPLQNNLHE 305
Query: 622 LWSLMHFLMPHIFQSHQEFKDWFCNPISGMVEGQEKVNKE--VVDRLHNVLRPFILRRLK 679
LW+L++FL+P +F +F + F N S ++ +EK ++ V LH +L PF+LRR+K
Sbjct: 306 LWALLNFLLPDVFGDSDQFDEAFDNQNSEELDEEEKQRRQDKAVSELHQLLSPFLLRRVK 365
Query: 680 RDVEKQLPMKQEHVIYCRLSKRQRNLYEDFIASSETQATLASANFFG---MISVIMQLRK 736
DVEK L K E +Y ++ Q Y+ + G +++++MQLRK
Sbjct: 366 ADVEKSLLPKIETNVYIGMTDMQVEWYKRLLEKDIDAVNGVVGKREGKTRLLNIVMQLRK 425
Query: 737 VCNHPDLFEG 746
CNHP LF+G
Sbjct: 426 CCNHPYLFDG 435
Score = 414 (150.8 bits), Expect = 5.8e-91, Sum P(5) = 5.8e-91
Identities = 80/165 (48%), Positives = 114/165 (69%)
Query: 984 YFPDRRLIQFDCGKLQELAILLRKLKSDGHRALIFTQMTKMLDILEEFISLYGYTYMRLD 1043
Y D L+ ++ GK+ L +L+K K++G R LIF+QM+++LDILE++ Y Y R+D
Sbjct: 442 YTTDEHLV-YNSGKMIILDKMLKKFKAEGSRVLIFSQMSRVLDILEDYCYFRDYEYCRID 500
Query: 1044 GSTQPEERQTLMQRFNT-NPKIFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQ 1102
GST E+R + +N + + F+F+L+TR+GG+GINL AD VI YDSDWNP D QA
Sbjct: 501 GSTSHEDRIEAIDEYNAPDSEKFIFLLTTRAGGLGINLTSADIVILYDSDWNPQADLQAM 560
Query: 1103 DRCHRIGQTREVHIYRLISESTIEENILKKANQKRALDDLVIQSG 1147
DR HRIGQ ++V ++R ++E IEE +L++A QK LD LVIQ G
Sbjct: 561 DRAHRIGQKKQVKVFRFVTEKAIEEKVLERAAQKLRLDQLVIQQG 605
Score = 48 (22.0 bits), Expect = 5.8e-91, Sum P(5) = 5.8e-91
Identities = 18/49 (36%), Positives = 24/49 (48%)
Query: 1441 LTSESKAVKEEPSVEPMSIDDDFYDEDATFSDAMSPPS-TSQKKRKKAE 1488
L E A K+E S + S+DD F D D F + T +KRK A+
Sbjct: 764 LEREQLAFKKEISYQ-YSVDD-FGDSDEEFLEQDDEDDMTRDEKRKIAQ 810
Score = 39 (18.8 bits), Expect = 5.8e-91, Sum P(5) = 5.8e-91
Identities = 9/21 (42%), Positives = 11/21 (52%)
Query: 1589 SPDVWLPQEDAILCAVVHEYG 1609
S V+ ED L VH+YG
Sbjct: 937 SKRVYSKTEDKFLLYCVHKYG 957
Score = 37 (18.1 bits), Expect = 5.8e-91, Sum P(5) = 5.8e-91
Identities = 13/46 (28%), Positives = 22/46 (47%)
Query: 1885 GKHKLSLSDSVKCPKSKLRKTSMEHSEI--QHSSPEPVSNQSVATK 1928
GK + ++ +S + R S+E S I + SPE + N+ K
Sbjct: 1012 GKKRKAMGES----NNSSRFGSVEPSSINGEKHSPEVIDNEQTVKK 1053
Score = 37 (18.1 bits), Expect = 8.0e-52, Sum P(5) = 8.0e-52
Identities = 11/45 (24%), Positives = 19/45 (42%)
Query: 1273 RALTFAAKEDDVDMLADVKQMXXXXXXXGEAISSFENQLRPIDRY 1317
R L F+ +D+L D + +S E+++ ID Y
Sbjct: 471 RVLIFSQMSRVLDILEDYCYFRDYEYCRIDGSTSHEDRIEAIDEY 515
>UNIPROTKB|Q9NRZ9 [details] [associations]
symbol:HELLS "Lymphoid-specific helicase" species:9606
"Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0051301 "cell
division" evidence=IEA] [GO:0001655 "urogenital system development"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0043066 "negative regulation of apoptotic process"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005721
"centromeric heterochromatin" evidence=ISS] [GO:0006346
"methylation-dependent chromatin silencing" evidence=ISS]
[GO:0007275 "multicellular organismal development" evidence=ISS]
[GO:0010216 "maintenance of DNA methylation" evidence=ISS]
[GO:0031508 "centromeric heterochromatin assembly" evidence=ISS]
[GO:0000775 "chromosome, centromeric region" evidence=ISS]
[GO:0046651 "lymphocyte proliferation" evidence=ISS]
InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0007275 GO:GO:0005524
GO:GO:0005634 GO:GO:0051301 GO:GO:0007067 GO:GO:0003677
EMBL:CH471066 GO:GO:0006351 GO:GO:0003682 GO:GO:0001655
GO:GO:0004386 GO:GO:0005721 HSSP:Q97XQ5 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0031508
GO:GO:0010216 GO:GO:0006346 GO:GO:0046651 EMBL:AF155827
EMBL:AB102717 EMBL:AB102718 EMBL:AB102719 EMBL:AB102720
EMBL:AB102721 EMBL:AB102722 EMBL:AK314485 EMBL:AB113249
EMBL:BX538033 EMBL:AL138759 EMBL:BC015477 EMBL:BC029381
EMBL:BC030963 EMBL:BC031004 EMBL:AY007108 EMBL:AB074174
IPI:IPI00010590 IPI:IPI00807418 IPI:IPI00807455 IPI:IPI00807553
IPI:IPI00807574 IPI:IPI00807597 IPI:IPI00807667 IPI:IPI00807698
IPI:IPI00807726 RefSeq:NP_060533.2 UniGene:Hs.655830
ProteinModelPortal:Q9NRZ9 SMR:Q9NRZ9 IntAct:Q9NRZ9 STRING:Q9NRZ9
PhosphoSite:Q9NRZ9 DMDM:74761670 PaxDb:Q9NRZ9 PRIDE:Q9NRZ9
DNASU:3070 Ensembl:ENST00000348459 Ensembl:ENST00000394036
Ensembl:ENST00000394044 Ensembl:ENST00000394045 GeneID:3070
KEGG:hsa:3070 UCSC:uc001kjs.3 UCSC:uc009xul.3 UCSC:uc009xum.3
CTD:3070 GeneCards:GC10P096305 H-InvDB:HIX0017337 HGNC:HGNC:4861
HPA:CAB004491 MIM:603946 neXtProt:NX_Q9NRZ9 PharmGKB:PA35054
HOVERGEN:HBG060049 OrthoDB:EOG4SN1N4 PhylomeDB:Q9NRZ9 ChiTaRS:HELLS
GenomeRNAi:3070 NextBio:12147 ArrayExpress:Q9NRZ9 Bgee:Q9NRZ9
Genevestigator:Q9NRZ9 GermOnline:ENSG00000119969 Uniprot:Q9NRZ9
Length = 838
Score = 525 (189.9 bits), Expect = 1.1e-90, Sum P(3) = 1.1e-90
Identities = 112/263 (42%), Positives = 165/263 (62%)
Query: 455 LREYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTIAMLAHLACEKGIWGPHLIVVPTS 514
+R YQ G++WL ++E +NGILADEMGLGKT+ IA +A L ++G+ GP L+ P S
Sbjct: 223 MRWYQVEGMEWLRMLWENGINGILADEMGLGKTVQCIATIA-LMIQRGVPGPFLVCGPLS 281
Query: 515 VMLNWETEFLKWCPAFKILTYFGSAKERK------FKRQGWLKPNSFHVCITTYRLIIQD 568
+ NW EF ++ P + Y G+ +ER+ +KR+G L+ + V IT++ + ++D
Sbjct: 282 TLPNWMAEFKRFTPDIPTMLYHGTQEERQKLVRNIYKRKGTLQIHP--VVITSFEIAMRD 339
Query: 569 SKVFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPLQNDLMELWSLMHF 628
+ WKYLI+DE H IKN K + + L FN+ ++LLTGTPLQN+L ELWSL++F
Sbjct: 340 RNALQHCYWKYLIVDEGHRIKNMKCRLIRELKRFNADNKLLLTGTPLQNNLSELWSLLNF 399
Query: 629 LMPHIFQSHQEFKDWFCNPISGMVEGQEKV-NKE----VVDRLHNVLRPFILRRLKRDVE 683
L+P +F + F+ WF I+ + E E + KE V+ LH +L PF+LRRLK DV
Sbjct: 400 LLPDVFDDLKSFESWF--DITSLSETAEDIIAKEREQNVLHMLHQILTPFLLRRLKSDVA 457
Query: 684 KQLPMKQEHVIYCRLSKRQRNLY 706
++P K+E V+Y LSK+Q Y
Sbjct: 458 LEVPPKREVVVYAPLSKKQEIFY 480
Score = 463 (168.0 bits), Expect = 1.1e-90, Sum P(3) = 1.1e-90
Identities = 119/310 (38%), Positives = 174/310 (56%)
Query: 896 QKTVRRSYLYSSKLADIVLSPVERFQRMIGLVESFMFAIPAARAPAPVCWCSKSGASVFL 955
++ R+S YS K+ D P E +++I ++ + RA V +S ++ L
Sbjct: 509 KRRTRKSINYS-KIDDF---PNE-LEKLISQIQP---EVDRERAVVEVNIPVESEVNLKL 560
Query: 956 QPTYK--EKCSEVLSPLLFPIRPAIVRRQVYFPDRRLIQFDCGKLQELAILLRKLKSDGH 1013
Q KC + +PI P Q + D L+ + GK L +L +LK GH
Sbjct: 561 QNIMMLLRKCCNHPYLIEYPIDPVT---QEFKIDEELVT-NSGKFLILDRMLPELKKRGH 616
Query: 1014 RALIFTQMTKMLDILEEFISLYGYTYMRLDGSTQPEERQTLMQRFNTNPKIFLFILSTRS 1073
+ L+F+QMT MLDIL ++ L + + RLDGS ER+ M FNT+P++F+F++STR+
Sbjct: 617 KVLLFSQMTSMLDILMDYCHLRDFNFSRLDGSMSYSEREKNMHSFNTDPEVFIFLVSTRA 676
Query: 1074 GGVGINLVGADTVIFYDSDWNPAMDQQAQDRCHRIGQTREVHIYRLISESTIEENILKKA 1133
GG+GINL ADTVI YDSDWNP D QAQDRCHRIGQT+ V +YRL++ +TI++ I+++A
Sbjct: 677 GGLGINLTAADTVIIYDSDWNPQSDLQAQDRCHRIGQTKPVVVYRLVTANTIDQKIVERA 736
Query: 1134 NQKRALDDLVIQS----GGYNTEFFKK--LDPMELFSGHRTLPMKTMQKEKAINNGNEVS 1187
KR L+ L+I GG + K LDP EL +K+ E+ I E
Sbjct: 737 AAKRKLEKLIIHKNHFKGGQSGLNLSKNFLDPKELME-----LLKSRDYEREIKGSREKV 791
Query: 1188 LSNADVEAAL 1197
+S+ D+E L
Sbjct: 792 ISDKDLELLL 801
Score = 57 (25.1 bits), Expect = 5.0e-48, Sum P(4) = 5.0e-48
Identities = 10/17 (58%), Positives = 13/17 (76%)
Query: 729 SVIMQLRKVCNHPDLFE 745
+++M LRK CNHP L E
Sbjct: 562 NIMMLLRKCCNHPYLIE 578
Score = 51 (23.0 bits), Expect = 1.1e-90, Sum P(3) = 1.1e-90
Identities = 19/91 (20%), Positives = 41/91 (45%)
Query: 38 EKLVLYKHQMEVDVRKKKALDKQLEFLLGQTERYSSMLAENLVDSHKPVQQSPM---REQ 94
E+ +L K +M D + ++L+ LL ++ YS L + Q+ R++
Sbjct: 45 ERKMLEKARMSWDRESTEIRYRRLQHLLEKSNIYSKFLLTKMEQQQLEEQKKKEKLERKK 104
Query: 95 PGIQYKEADEN---GAEEPGVQSKEADEDDA 122
++ K+ + E+P ++ K ED++
Sbjct: 105 ESLKVKKGKNSIDASEEKPVMRKKRGREDES 135
Score = 40 (19.1 bits), Expect = 5.0e-48, Sum P(4) = 5.0e-48
Identities = 17/82 (20%), Positives = 34/82 (41%)
Query: 1717 RQNFSSSRNGLYLGGSFFSSVTQTSCKSTREPARRVKFTNLGQSSKLLSAALHDANSRQQ 1776
+ +F ++GL L +F +R+ R +K G K++S D +
Sbjct: 749 KNHFKGGQSGLNLSKNFLDPKELMELLKSRDYEREIK----GSREKVIS----DKDLELL 800
Query: 1777 DDKVSNFDRRE-DGPVIEQLDL 1797
D+ D+ GP+ E++ +
Sbjct: 801 LDRSDLIDQMNASGPIKEKMGI 822
Score = 40 (19.1 bits), Expect = 2.2e-46, Sum P(3) = 2.2e-46
Identities = 15/68 (22%), Positives = 29/68 (42%)
Query: 1758 GQSSKLLSAALHDANSRQQDDKVSNFDRREDGP-----VIEQLDLTLEFQRELVDSTISF 1812
G S K +++ K N+ + +D P +I Q+ ++ +R +V+ I
Sbjct: 493 GSSEKETIELSPTGRPKRRTRKSINYSKIDDFPNELEKLISQIQPEVDRERAVVEVNIPV 552
Query: 1813 PPRVNLSV 1820
VNL +
Sbjct: 553 ESEVNLKL 560
>UNIPROTKB|E1BCV0 [details] [associations]
symbol:HELLS "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0046651 "lymphocyte proliferation" evidence=IEA]
[GO:0043066 "negative regulation of apoptotic process"
evidence=IEA] [GO:0031508 "centromeric heterochromatin assembly"
evidence=IEA] [GO:0010216 "maintenance of DNA methylation"
evidence=IEA] [GO:0006346 "methylation-dependent chromatin
silencing" evidence=IEA] [GO:0005721 "centromeric heterochromatin"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0001655 "urogenital system
development" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005634 GO:GO:0003677 GO:GO:0003682
GO:GO:0001655 GO:GO:0004386 GO:GO:0005721 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0031508 GO:GO:0010216
OMA:ETFYTAI GO:GO:0006346 GO:GO:0046651
GeneTree:ENSGT00550000075106 EMBL:DAAA02058849 EMBL:DAAA02058850
EMBL:DAAA02058851 IPI:IPI00710948 Ensembl:ENSBTAT00000007848
Uniprot:E1BCV0
Length = 816
Score = 519 (187.8 bits), Expect = 1.6e-90, Sum P(3) = 1.6e-90
Identities = 111/263 (42%), Positives = 164/263 (62%)
Query: 455 LREYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTIAMLAHLACEKGIWGPHLIVVPTS 514
+R YQ G++WL ++E +NGILADEMGLGKT+ IA +A L ++G+ GP L+ P S
Sbjct: 201 MRWYQVEGMEWLRMLWENGINGILADEMGLGKTVQCIATIA-LMIQRGVPGPFLVCGPLS 259
Query: 515 VMLNWETEFLKWCPAFKILTYFGSAKERKF------KRQGWLKPNSFHVCITTYRLIIQD 568
+ NW EF ++ P + Y G+ +ER+ +R+G L+ + V IT++ + ++D
Sbjct: 260 TLPNWMAEFKRFTPEIPTMLYHGTQQERRILVKHIHERKGTLQIHP--VVITSFEIAMRD 317
Query: 569 SKVFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPLQNDLMELWSLMHF 628
+ WKYLI+DE H IKN K + + L FN+ ++LLTGTPLQN+L ELWSL++F
Sbjct: 318 RTTLQNCYWKYLIVDEGHRIKNMKCRLIRELKRFNADNKLLLTGTPLQNNLSELWSLLNF 377
Query: 629 LMPHIFQSHQEFKDWFCNPISGMVEGQEKV-NKE----VVDRLHNVLRPFILRRLKRDVE 683
L+P +F + F+ WF I+ + E E + KE V+ LH +L PF+LRRLK DV
Sbjct: 378 LLPDVFDDLKSFESWF--DITSLSETAEDIIAKEREQNVLHMLHQILTPFLLRRLKSDVA 435
Query: 684 KQLPMKQEHVIYCRLSKRQRNLY 706
++P K+E V+Y LSK+Q Y
Sbjct: 436 LEVPPKREVVVYAPLSKKQEIFY 458
Score = 456 (165.6 bits), Expect = 1.6e-90, Sum P(3) = 1.6e-90
Identities = 102/242 (42%), Positives = 146/242 (60%)
Query: 962 KCSEVLSPLLFPIRPAIVRRQVYFPDRRLIQFDCGKLQELAILLRKLKSDGHRALIFTQM 1021
KC + +PI P Q + D L+ + GK L +L +LK+ GH+ L+F+QM
Sbjct: 547 KCCNHPYLIEYPIDPVT---QEFKVDEELVT-NSGKFLILDRMLPELKTRGHKVLLFSQM 602
Query: 1022 TKMLDILEEFISLYGYTYMRLDGSTQPEERQTLMQRFNTNPKIFLFILSTRSGGVGINLV 1081
T+MLDIL ++ + + RLDGS ER+ + FNT+P +F+F++STR+GG+GINL
Sbjct: 603 TRMLDILMDYCHFRNFNFSRLDGSMSYSEREKNIHSFNTDPDVFIFLVSTRAGGLGINLT 662
Query: 1082 GADTVIFYDSDWNPAMDQQAQDRCHRIGQTREVHIYRLISESTIEENILKKANQKRALDD 1141
ADTVI YDSDWNP D QAQDRCHRIGQTR V +YRL++ +TI++ I+++A KR L+
Sbjct: 663 AADTVIIYDSDWNPQSDLQAQDRCHRIGQTRPVVVYRLVTANTIDQKIVERAAAKRKLEK 722
Query: 1142 LVIQS----GGYNTEFFKK--LDPMELFSGHRTLPMKTMQKEKAINNGNEVSLSNADVEA 1195
L+I GG + K LDP EL +K+ E+ + E +S+ D+E
Sbjct: 723 LIIHKNHFKGGQSGLNQSKNFLDPKELME-----LLKSRDYEREVKGSREKVISDKDLEL 777
Query: 1196 AL 1197
L
Sbjct: 778 LL 779
Score = 61 (26.5 bits), Expect = 1.6e-90, Sum P(3) = 1.6e-90
Identities = 13/32 (40%), Positives = 18/32 (56%)
Query: 714 ETQATLASANFFGMISVIMQLRKVCNHPDLFE 745
ET + S + +++M LRK CNHP L E
Sbjct: 525 ETSVPIESEVNLKLQNIMMLLRKCCNHPYLIE 556
Score = 45 (20.9 bits), Expect = 9.8e-46, Sum P(2) = 9.8e-46
Identities = 22/81 (27%), Positives = 38/81 (46%)
Query: 967 LSPLLFPIRPAIVRRQVYFPDRRLIQFDCG-KLQELAILLRKLKSDGHRALI---FTQMT 1022
L L+ I+P + R + I+ + KLQ + +LLRK + H LI +T
Sbjct: 506 LEKLISQIQPEVDRERTIVETSVPIESEVNLKLQNIMMLLRKCCN--HPYLIEYPIDPVT 563
Query: 1023 KMLDILEEFISLYGYTYMRLD 1043
+ + EE ++ G ++ LD
Sbjct: 564 QEFKVDEELVTNSG-KFLILD 583
Score = 42 (19.8 bits), Expect = 2.0e-45, Sum P(2) = 2.0e-45
Identities = 9/42 (21%), Positives = 23/42 (54%)
Query: 1779 KVSNFDRREDGPVIEQLDLTLEFQRELVDSTISFPPRVNLSV 1820
K+ +F + +I Q+ ++ +R +V++++ VNL +
Sbjct: 498 KIDDFPNELE-KLISQIQPEVDRERTIVETSVPIESEVNLKL 538
>UNIPROTKB|F1SC64 [details] [associations]
symbol:HELLS "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0046651 "lymphocyte proliferation" evidence=IEA]
[GO:0043066 "negative regulation of apoptotic process"
evidence=IEA] [GO:0031508 "centromeric heterochromatin assembly"
evidence=IEA] [GO:0010216 "maintenance of DNA methylation"
evidence=IEA] [GO:0006346 "methylation-dependent chromatin
silencing" evidence=IEA] [GO:0005721 "centromeric heterochromatin"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0001655 "urogenital system
development" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005634 GO:GO:0003677 GO:GO:0003682
GO:GO:0001655 GO:GO:0004386 GO:GO:0005721 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0031508 GO:GO:0010216
OMA:ETFYTAI GO:GO:0006346 GO:GO:0046651
GeneTree:ENSGT00550000075106 EMBL:CU468514
Ensembl:ENSSSCT00000011474 Uniprot:F1SC64
Length = 838
Score = 530 (191.6 bits), Expect = 2.0e-90, Sum P(4) = 2.0e-90
Identities = 114/263 (43%), Positives = 165/263 (62%)
Query: 455 LREYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTIAMLAHLACEKGIWGPHLIVVPTS 514
+R YQ G++WL ++E +NGILADEMGLGKT+ IA +A L ++G+ GP L+ P S
Sbjct: 223 MRWYQVEGMEWLRMLWENGINGILADEMGLGKTVQCIATIA-LMIQRGVPGPFLVCGPLS 281
Query: 515 VMLNWETEFLKWCPAFKILTYFGSAKERK------FKRQGWLKPNSFHVCITTYRLIIQD 568
+ NW EF ++ P + Y GS +ER+ KR+G L+ + V IT++ + ++D
Sbjct: 282 TLPNWMAEFQRFTPEIPTMLYHGSQQERRKLVNHIHKRKGTLQIHP--VVITSFEIAMRD 339
Query: 569 SKVFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPLQNDLMELWSLMHF 628
V + WKYLI+DE H IKN K + + L FN+ ++LLTGTPLQN+L ELWSL++F
Sbjct: 340 RNVLQHCYWKYLIVDEGHRIKNMKCRLIRELKRFNADNKLLLTGTPLQNNLSELWSLLNF 399
Query: 629 LMPHIFQSHQEFKDWFCNPISGMVEGQEKV-NKE----VVDRLHNVLRPFILRRLKRDVE 683
L+P +F + F+ WF I+ + E E + KE V+ LH +L PF+LRRLK DV
Sbjct: 400 LLPDVFDDLKSFESWF--DITSLSETAEDIIAKEREQNVLHMLHQILTPFLLRRLKSDVA 457
Query: 684 KQLPMKQEHVIYCRLSKRQRNLY 706
++P K+E V+Y LSK+Q Y
Sbjct: 458 LEVPPKREVVVYAPLSKKQEVFY 480
Score = 452 (164.2 bits), Expect = 2.0e-90, Sum P(4) = 2.0e-90
Identities = 102/242 (42%), Positives = 145/242 (59%)
Query: 962 KCSEVLSPLLFPIRPAIVRRQVYFPDRRLIQFDCGKLQELAILLRKLKSDGHRALIFTQM 1021
KC + +PI P Q + D L+ + GK L +L +LK GH+ L+F+QM
Sbjct: 569 KCCNHPYLIEYPIDPVT---QEFKIDEELVT-NSGKFLILDRMLPELKIRGHKVLLFSQM 624
Query: 1022 TKMLDILEEFISLYGYTYMRLDGSTQPEERQTLMQRFNTNPKIFLFILSTRSGGVGINLV 1081
T+MLDIL ++ + + RLDGS ER+ M FNT+P +F+F++STR+GG+GINL
Sbjct: 625 TRMLDILMDYCHFRNFNFSRLDGSMSYTEREKNMHSFNTDPDVFIFLVSTRAGGLGINLT 684
Query: 1082 GADTVIFYDSDWNPAMDQQAQDRCHRIGQTREVHIYRLISESTIEENILKKANQKRALDD 1141
ADTVI YDSDWNP D QAQDRCHRIGQT+ V +YRL++ +TI++ I+++A KR L+
Sbjct: 685 AADTVIIYDSDWNPQSDLQAQDRCHRIGQTKPVVVYRLVTANTIDQKIVERAAAKRKLEK 744
Query: 1142 LVIQS----GGYNTEFFKK--LDPMELFSGHRTLPMKTMQKEKAINNGNEVSLSNADVEA 1195
L+I GG + K LDP EL +K+ E+ + E +S+ D+E
Sbjct: 745 LIIHKNHFKGGQSGLNQSKNFLDPKELME-----LLKSRDYEREVKGSREKVISDKDLEL 799
Query: 1196 AL 1197
L
Sbjct: 800 LL 801
Score = 59 (25.8 bits), Expect = 2.0e-90, Sum P(4) = 2.0e-90
Identities = 13/32 (40%), Positives = 18/32 (56%)
Query: 714 ETQATLASANFFGMISVIMQLRKVCNHPDLFE 745
ET + S + +++M LRK CNHP L E
Sbjct: 547 ETNIPVESEVNLKLQNIMMLLRKCCNHPYLIE 578
Score = 46 (21.3 bits), Expect = 3.0e-46, Sum P(3) = 3.0e-46
Identities = 22/81 (27%), Positives = 38/81 (46%)
Query: 967 LSPLLFPIRPAIVRRQVYFPDRRLIQFDCG-KLQELAILLRKLKSDGHRALI---FTQMT 1022
L L+ I+P + R + ++ + KLQ + +LLRK + H LI +T
Sbjct: 528 LEKLISQIQPEVDRERAVVETNIPVESEVNLKLQNIMMLLRKCCN--HPYLIEYPIDPVT 585
Query: 1023 KMLDILEEFISLYGYTYMRLD 1043
+ I EE ++ G ++ LD
Sbjct: 586 QEFKIDEELVTNSG-KFLILD 605
Score = 42 (19.8 bits), Expect = 7.8e-46, Sum P(3) = 7.8e-46
Identities = 16/72 (22%), Positives = 33/72 (45%)
Query: 1755 TNL-GQSSKLLSAALHDANSRQQDDKVSNFDRREDGP-----VIEQLDLTLEFQRELVDS 1808
TN+ G S K +++ K ++ + +D P +I Q+ ++ +R +V++
Sbjct: 489 TNMFGSSEKETVELSPTGRPKRRTRKSIDYSKIDDFPNELEKLISQIQPEVDRERAVVET 548
Query: 1809 TISFPPRVNLSV 1820
I VNL +
Sbjct: 549 NIPVESEVNLKL 560
Score = 38 (18.4 bits), Expect = 2.0e-90, Sum P(4) = 2.0e-90
Identities = 18/84 (21%), Positives = 40/84 (47%)
Query: 38 EKLVLYKHQMEVDVRKKKALDKQLEFLLGQTERYSSMLAENLVDSHKPVQQSPMREQPGI 97
E+ +L K +M D ++L+ LL ++ YS L + + +++ +E+ +
Sbjct: 45 ERKMLEKARMSWDRESVDIRYRRLQHLLEKSNIYSKFLLTKM--EQQQLEEQKKKEK--L 100
Query: 98 QYKEADENGAEEPGVQSKEADEDD 121
+ K+ E+ G S +A E++
Sbjct: 101 ERKK--ESLKVTKGKNSIDASEEN 122
>DICTYBASE|DDB_G0267556 [details] [associations]
symbol:DDB_G0267556 "CHR group protein" species:44689
"Dictyostelium discoideum" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 dictyBase:DDB_G0267556
GO:GO:0005524 GO:GO:0003677 EMBL:AAFI02000003 GO:GO:0004386
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
RefSeq:XP_647125.1 ProteinModelPortal:Q55GQ9
EnsemblProtists:DDB0233433 GeneID:8615929 KEGG:ddi:DDB_G0267556
InParanoid:Q55GQ9 OMA:CANVVIF ProtClustDB:CLSZ2501118
Uniprot:Q55GQ9
Length = 1159
Score = 590 (212.7 bits), Expect = 2.4e-90, Sum P(4) = 2.4e-90
Identities = 127/287 (44%), Positives = 180/287 (62%)
Query: 435 GITFSTTQVRTKFPFLLKFPLREYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTIAML 494
G TFS V P ++ +R YQ IGL+W+ +Y++++NGILADEMGLGKT+ TI++L
Sbjct: 524 GPTFSHKLVAQ--PKIINKVMRNYQLIGLNWMAVLYKEKINGILADEMGLGKTVQTISLL 581
Query: 495 AHLACEKGIWGPHLIVVPTSVMLNWETEFLKWCPAFKILTYFGSAKERKFKRQGWLK--P 552
AH+ GPHL+VVP +++ NWE EF WCP+ I+ Y+G+ +ER+ R K P
Sbjct: 582 AHIKEAYNDNGPHLVVVPATILANWEREFQTWCPSLSIVRYYGNLREREELRYELKKKRP 641
Query: 553 NS-FHVCITTYRLII--QDSKVFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRIL 609
F+V +TTY L+ D KR + +LILDEA IKN S+R++ + + R+L
Sbjct: 642 GKDFNVILTTYNLLFANNDRGFLKRFDYSFLILDEAQNIKNSDSKRYKNIFKIGAHHRLL 701
Query: 610 LTGTPLQNDLMELWSLMHFLMPHIFQSHQEFKDWFCNPISGMVEGQEKVNKEVVDRLHNV 669
LTGTPLQN+L ELWSL++FLMPHIF S + KD + ++ ++E + R+ +
Sbjct: 702 LTGTPLQNNLYELWSLLNFLMPHIFGSVK--KDNYL--LNQLLEYNGDDCDSAITRMKKI 757
Query: 670 LRPFILRRLKRDVEKQLPMKQEHVIYCRLSKRQRNLYEDFIASSETQ 716
L PFILRRLK V K+L K EHV C+L K Q Y++ I S++Q
Sbjct: 758 LSPFILRRLKSTVSKELKPKIEHVEICKLPKFQDETYKNIIERSKSQ 804
Score = 413 (150.4 bits), Expect = 2.4e-90, Sum P(4) = 2.4e-90
Identities = 80/169 (47%), Positives = 123/169 (72%)
Query: 984 YFPDRRLIQFD--CGKLQELAILLRKLKSDGHRALIFTQMTKMLDILEEFISLYGYTYMR 1041
+ PD + I+ C KL+E IL +++ + + LIF+QMT++LDILE+ + ++GY + R
Sbjct: 973 WIPDEQFIETSTKCLKLKE--ILAKEIGVNKSKVLIFSQMTRVLDILEDVLDIFGYNFTR 1030
Query: 1042 LDGSTQPEERQTLMQRFNTNPKIFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQA 1101
LDGST ERQ+++ F++ I +F+LST SGG+GINL A+ VIFYD +NP +D+QA
Sbjct: 1031 LDGSTPVNERQSIIDHFSSKETIPVFLLSTNSGGLGINLTCANVVIFYDLSFNPQVDRQA 1090
Query: 1102 QDRCHRIGQTREVHIYRLISESTIEENILKKANQKRALDDLVIQSGGYN 1150
+DR HR+GQ REV IY+L++E+T++ NI + ANQK+ L+D V++ G +N
Sbjct: 1091 EDRAHRLGQEREVIIYKLLAENTVDINIHESANQKKKLNDNVLEEGTFN 1139
Score = 53 (23.7 bits), Expect = 2.4e-90, Sum P(4) = 2.4e-90
Identities = 9/17 (52%), Positives = 13/17 (76%)
Query: 725 FGMISVIMQLRKVCNHP 741
F + +++MQLRK NHP
Sbjct: 893 FVLNNILMQLRKAANHP 909
Score = 42 (19.8 bits), Expect = 1.8e-31, Sum P(5) = 1.8e-31
Identities = 16/67 (23%), Positives = 32/67 (47%)
Query: 638 QEFKDWFCNPISGMVEGQEKVNKEVVDRLHNVLRPFILRRLKRDVEKQLPMKQEHVIYCR 697
+EFKD VE +K+ K+++ ++ +L+ + D E ++E V++
Sbjct: 330 EEFKDK-----KKKVEN-DKITKDILGQVDKLLKKETKKVDDSDTEDDEEEEEEEVLFVN 383
Query: 698 LSKRQRN 704
KR+ N
Sbjct: 384 -KKRKSN 389
Score = 39 (18.8 bits), Expect = 2.4e-90, Sum P(4) = 2.4e-90
Identities = 14/66 (21%), Positives = 26/66 (39%)
Query: 50 DVRKKKALDKQLEFLLGQTERYSSMLAENLVDSHKPVQQSPMREQPGIQYKEADENGAEE 109
D +KK DK + +LGQ ++ + + DS + E+ K+ N +
Sbjct: 334 DKKKKVENDKITKDILGQVDKLLKKETKKVDDSDTEDDEEEEEEEVLFVNKKRKSNPLDG 393
Query: 110 PGVQSK 115
+K
Sbjct: 394 SSTPTK 399
Score = 39 (18.8 bits), Expect = 1.4e-89, Sum P(5) = 1.4e-89
Identities = 8/25 (32%), Positives = 13/25 (52%)
Query: 266 TSKKSGASTQKQALYDFSDEQEDGD 290
TSK + + L+ FS Q +G+
Sbjct: 180 TSKDDKKNVDTKLLFSFSSRQPNGN 204
Score = 37 (18.1 bits), Expect = 1.4e-89, Sum P(5) = 1.4e-89
Identities = 10/38 (26%), Positives = 23/38 (60%)
Query: 87 QQSPMREQPGIQYKEADENGAEEPGVQSKEADEDDAEQ 124
+ SP++++ Q K+ +E+ +E +E +EDD ++
Sbjct: 98 KSSPIKKKK--QSKKVEEDEEDE----DEEDEEDDEDE 129
Score = 37 (18.1 bits), Expect = 1.7e-49, Sum P(4) = 1.7e-49
Identities = 19/94 (20%), Positives = 40/94 (42%)
Query: 1174 MQKEKAINNGNEVSLSNADVEAALKCVEDEADYMALKRAEQEEAVDNQEFTEEAVGRPED 1233
++KEK + SL N+ +++K + + E++E ++ + G D
Sbjct: 813 LKKEKEEKEKEKQSLINSS-NSSIKKKRKTSSIYKNNKIEKDEIIEIDD------GG--D 863
Query: 1234 DELVIEDTVRTDEPTDQGGCMTANNDNGMMLTGN 1267
D+ +I+ T DE + +N +G + N
Sbjct: 864 DDGLIDLTKTNDEKDMELSIKLKSNGSGQFVLNN 897
>FB|FBgn0032157 [details] [associations]
symbol:Etl1 "Etl1 homologue" species:7227 "Drosophila
melanogaster" [GO:0004003 "ATP-dependent DNA helicase activity"
evidence=ISS] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005634 EMBL:AE014134 GO:GO:0003677
GO:GO:0006281 GO:GO:0016568 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 KO:K14439
GeneTree:ENSGT00630000089890 OMA:KEERYMA EMBL:AY060597
RefSeq:NP_001033889.1 RefSeq:NP_001033890.1 RefSeq:NP_609320.2
UniGene:Dm.3953 ProteinModelPortal:Q9VL72 SMR:Q9VL72 IntAct:Q9VL72
STRING:Q9VL72 PRIDE:Q9VL72 EnsemblMetazoa:FBtr0079901 GeneID:34311
KEGG:dme:Dmel_CG5899 UCSC:CG5899-RA FlyBase:FBgn0032157
InParanoid:Q9VL72 PhylomeDB:Q9VL72 GenomeRNAi:34311 NextBio:787873
Bgee:Q9VL72 Uniprot:Q9VL72
Length = 844
Score = 568 (205.0 bits), Expect = 4.5e-90, Sum P(2) = 4.5e-90
Identities = 125/299 (41%), Positives = 188/299 (62%)
Query: 455 LREYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTIAMLAHLACEKGI-WGPHLIVVPT 513
L +YQ IGL+WL M+++ +NGILADEMGLGKTI IA LA+L E G+ HLIVVP+
Sbjct: 289 LADYQIIGLNWLTVMHKQEMNGILADEMGLGKTIQVIAFLAYLK-ENGLSQAAHLIVVPS 347
Query: 514 SVMLNWETEFLKWCPAFKILTYFGSAKERKFKRQGWLKPN--SFHVCITTYRLI---IQD 568
S + NWE E +WCP + Y GS ER+ R + K F V +TTY ++ ++
Sbjct: 348 STLDNWEAEISRWCPELVVEKYHGSQDERRRMRGRFAKDGFTGFDVLLTTYHIVGSTPEE 407
Query: 569 SKVFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPLQNDLMELWSLMHF 628
K+F+ K Y+I DEAH++KN +QR+ L+ N++ RILLTGTPLQN+L+EL SL+ F
Sbjct: 408 RKMFRVCKLDYVIFDEAHMLKNMTTQRYANLITINARMRILLTGTPLQNNLLELISLLCF 467
Query: 629 LMPHIF-QSHQEFKDWFCNPISGMVEG-QEKVNK--EV-VDRLHNVLRPFILRRLKRDVE 683
+MP F +S ++ K F G +G Q++V++ E + R +++PF+LRRLK+DV
Sbjct: 468 VMPKFFAKSIEDIKSLFAK--KGKSDGDQDEVSQFQETQIQRAKRIMKPFVLRRLKKDVL 525
Query: 684 KQLPMKQEHVIYCRLSKRQRNLYEDFIAS-SETQATLASANFFGMISVIMQLRKVCNHP 741
K LP K V +S +Q+ Y + + S + + S++ I+++M++R++ NHP
Sbjct: 526 KNLPKKLSLVEKVPMSSQQKIYYHELVDYYSNNKGEVCSSSERAGIAIMMEMRRIANHP 584
Score = 413 (150.4 bits), Expect = 4.5e-90, Sum P(2) = 4.5e-90
Identities = 86/167 (51%), Positives = 113/167 (67%)
Query: 983 VYFPDRRLIQFDCGKLQELAILLRKLKSDGHRALIFTQMTKMLDILEEFISLYGYTYMRL 1042
V PD + D GK L LL KLK++GHR L+F+Q T MLDI+EE++ + + + RL
Sbjct: 641 VKIPDNLIC--DSGKFLYLDTLLPKLKAEGHRVLLFSQFTMMLDIVEEYLRIRKFGFCRL 698
Query: 1043 DGSTQPEERQTLMQRFNTNPKIFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQ 1102
DG+T RQ L+ FN + IF+F+LST++GGVGINL ADT + +D D+NP D+QA+
Sbjct: 699 DGATAVNVRQDLITDFNGDDSIFVFLLSTKAGGVGINLTAADTCVIHDIDFNPYNDKQAE 758
Query: 1103 DRCHRIGQTREVHIYRLISESTIEENILKKANQKRALD-DLVIQSGG 1148
DRCHR+GQ R V IYRLISESTIEE IL A +K L+ D+ G
Sbjct: 759 DRCHRMGQQRPVTIYRLISESTIEEGILMAAEEKLKLEKDITSNEKG 805
Score = 39 (18.8 bits), Expect = 4.6e-33, Sum P(2) = 4.6e-33
Identities = 15/54 (27%), Positives = 24/54 (44%)
Query: 48 EVDVRKKKALDKQLEFLLGQTERYSSMLAENLVDSHKPVQQSPMREQPGIQYKE 101
E +++ K + K F+L R + +NL V++ PM Q I Y E
Sbjct: 502 ETQIQRAKRIMKP--FVL---RRLKKDVLKNLPKKLSLVEKVPMSSQQKIYYHE 550
>UNIPROTKB|F1RWW3 [details] [associations]
symbol:SMARCAD1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0070933 "histone H4 deacetylation" evidence=IEA]
[GO:0070932 "histone H3 deacetylation" evidence=IEA] [GO:0051304
"chromosome separation" evidence=IEA] [GO:0043596 "nuclear
replication fork" evidence=IEA] [GO:0043044 "ATP-dependent
chromatin remodeling" evidence=IEA] [GO:0035861 "site of
double-strand break" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0000792 "heterochromatin" evidence=IEA]
[GO:0000729 "DNA double-strand break processing" evidence=IEA]
[GO:0000018 "regulation of DNA recombination" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR003892 InterPro:IPR009060 Pfam:PF00176 Pfam:PF00271
PROSITE:PS51140 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003677 GO:GO:0043596 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 SUPFAM:SSF46934 GO:GO:0000792
GO:GO:0070932 GO:GO:0070933 GO:GO:0000018
GeneTree:ENSGT00630000089890 GO:GO:0051304 OMA:KNQRGIQ
EMBL:CU951443 Ensembl:ENSSSCT00000010066 Uniprot:F1RWW3
Length = 1029
Score = 602 (217.0 bits), Expect = 7.7e-90, Sum P(2) = 7.7e-90
Identities = 129/292 (44%), Positives = 178/292 (60%)
Query: 455 LREYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTIAMLAHLACEKGIWGPHLIVVPTS 514
L+ YQ +GL+WL +++ LNGILADEMGLGKTI IA LA+L ++G GPHLIVVP S
Sbjct: 500 LKPYQKVGLNWLALVHKHGLNGILADEMGLGKTIQAIAFLAYLY-QEGNKGPHLIVVPAS 558
Query: 515 VMLNWETEFLKWCPAFKILTYFGSAKERKFKRQG-WLKPNSFHVCITTYRLIIQ---DSK 570
+ NW E WCP K+L Y+GS +ERK R K ++V +TTY I D
Sbjct: 559 TIDNWLREVNLWCPTLKVLCYYGSQEERKQIRYNIHSKYEEYNVIVTTYNCAISSSDDRS 618
Query: 571 VFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPLQNDLMELWSLMHFLM 630
+F+R K Y I DE H++KN S R+Q L+ N+ R+LLTGTP+QN+L+EL SL++F+M
Sbjct: 619 LFRRLKLNYAIFDEGHMLKNMGSIRYQHLMTINANNRLLLTGTPVQNNLLELMSLLNFVM 678
Query: 631 PHIFQSH-QEFKDWFCNPISGMVEGQEKVNKEVVDRLHNVLRPFILRRLKRDVEKQLPMK 689
PH+F S E + F + E Q KE + +++PFILRR+K +V KQLP K
Sbjct: 679 PHMFSSSTSEIRRMFSSKTKSADE-QSIYEKERIAHAKQIIKPFILRRVKEEVLKQLPPK 737
Query: 690 QEHVIYCRLSKRQRNLYEDFIASSETQATLASANFFGMISVIMQLRKVCNHP 741
++ + C +S++Q LY + N M +V+MQLRK+ NHP
Sbjct: 738 KDQIELCAMSEKQEQLYLGLFNRLKKSINNMEKNT-EMCNVMMQLRKMANHP 788
Score = 385 (140.6 bits), Expect = 7.7e-90, Sum P(2) = 7.7e-90
Identities = 78/154 (50%), Positives = 107/154 (69%)
Query: 987 DRRLIQFDCGKLQELAILLRKLKSDGHRALIFTQMTKMLDILEEFISLYGYTYMRLDGST 1046
D LI D GK + L +L +LK G R ++F+Q T MLDILE + + + Y+RLDG T
Sbjct: 849 DMDLI-LDSGKFRVLGCILSELKQKGDRVVLFSQFTMMLDILEVLLKHHQHRYLRLDGKT 907
Query: 1047 QPEERQTLMQRFNTNPKIFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQDRCH 1106
Q ER L+ FNT+ IF+F+LST++GG+GINL A+ VI +D D NP D+QA+DRCH
Sbjct: 908 QISERIHLIDEFNTDMDIFVFLLSTKAGGLGINLTSANVVILHDIDCNPYNDKQAEDRCH 967
Query: 1107 RIGQTREVHIYRLISESTIEENILKKANQKRALD 1140
R+GQT+EV + +LIS+ TIEE++LK QK L+
Sbjct: 968 RVGQTKEVLVIKLISQGTIEESMLKINQQKLKLE 1001
Score = 44 (20.5 bits), Expect = 3.9e-30, Sum P(2) = 3.9e-30
Identities = 19/79 (24%), Positives = 38/79 (48%)
Query: 212 VVEEGHVQGN-GN----DLL---AGSKLDTSGSLVRR-CDEINGGLSISENHLLDIETSQ 262
+ +EGH+ N G+ L+ A ++L +G+ V+ E+ L+ H+ TS+
Sbjct: 629 IFDEGHMLKNMGSIRYQHLMTINANNRLLLTGTPVQNNLLELMSLLNFVMPHMFSSSTSE 688
Query: 263 VRDTSKKSGASTQKQALYD 281
+R S +Q++Y+
Sbjct: 689 IRRMFSSKTKSADEQSIYE 707
>UNIPROTKB|E2QW28 [details] [associations]
symbol:HELLS "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0003677 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 OMA:ETFYTAI
GeneTree:ENSGT00550000075106 EMBL:AAEX03015428
Ensembl:ENSCAFT00000012889 Uniprot:E2QW28
Length = 839
Score = 522 (188.8 bits), Expect = 7.8e-90, Sum P(4) = 7.8e-90
Identities = 112/263 (42%), Positives = 164/263 (62%)
Query: 455 LREYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTIAMLAHLACEKGIWGPHLIVVPTS 514
+R YQ G++WL ++E +NGILADEMGLGKT+ IA +A L ++G+ GP L+ P S
Sbjct: 224 MRWYQVEGMEWLRMLWENGINGILADEMGLGKTVQCIATIA-LMIQRGVPGPFLVCGPLS 282
Query: 515 VMLNWETEFLKWCPAFKILTYFGSAKERK------FKRQGWLKPNSFHVCITTYRLIIQD 568
+ NW EF ++ P + Y G+ +ER+ KR+G L+ + V IT++ + ++D
Sbjct: 283 TLPNWMAEFQRFTPDIPTMLYHGTQQERRKLVKNIHKRKGTLQIHP--VVITSFEIAMRD 340
Query: 569 SKVFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPLQNDLMELWSLMHF 628
+ WKYLI+DE H IKN K + + L FN+ ++LLTGTPLQN+L ELWSL++F
Sbjct: 341 RNALQHCYWKYLIVDEGHRIKNMKCRLIRELKRFNADNKLLLTGTPLQNNLSELWSLLNF 400
Query: 629 LMPHIFQSHQEFKDWFCNPISGMVEGQEKV-NKE----VVDRLHNVLRPFILRRLKRDVE 683
L+P +F + F+ WF I+ + E E + KE V+ LH +L PF+LRRLK DV
Sbjct: 401 LLPDVFDDLKSFESWF--DITSLSETAEDIIAKEREQNVLHMLHQILTPFLLRRLKSDVA 458
Query: 684 KQLPMKQEHVIYCRLSKRQRNLY 706
++P K+E V+Y LSK+Q Y
Sbjct: 459 LEVPPKREVVVYAPLSKKQEIFY 481
Score = 456 (165.6 bits), Expect = 7.8e-90, Sum P(4) = 7.8e-90
Identities = 102/242 (42%), Positives = 146/242 (60%)
Query: 962 KCSEVLSPLLFPIRPAIVRRQVYFPDRRLIQFDCGKLQELAILLRKLKSDGHRALIFTQM 1021
KC + +PI P Q + D L+ + GK L +L +LK+ GH+ L+F+QM
Sbjct: 570 KCCNHPYLIEYPIDPVT---QEFKIDEELVT-NSGKFLILDRMLPELKARGHKVLLFSQM 625
Query: 1022 TKMLDILEEFISLYGYTYMRLDGSTQPEERQTLMQRFNTNPKIFLFILSTRSGGVGINLV 1081
T+MLDIL ++ + + RLDGS ER+ M FNT+P +F+F++STR+GG+GINL
Sbjct: 626 TRMLDILMDYCHFRNFNFSRLDGSMSYSEREKNMHSFNTDPDVFIFLVSTRAGGLGINLT 685
Query: 1082 GADTVIFYDSDWNPAMDQQAQDRCHRIGQTREVHIYRLISESTIEENILKKANQKRALDD 1141
ADTVI YDSDWNP D QAQDRCHRIGQT+ V +YRL++ +TI++ I+++A KR L+
Sbjct: 686 AADTVIIYDSDWNPQSDLQAQDRCHRIGQTKPVVVYRLVTANTIDQKIVERAAAKRKLEK 745
Query: 1142 LVIQS----GGYNTEFFKK--LDPMELFSGHRTLPMKTMQKEKAINNGNEVSLSNADVEA 1195
L+I GG + K LDP EL +K+ E+ + E +S+ D+E
Sbjct: 746 LIIHKNHFKGGQSGLNQSKNFLDPKELME-----LLKSRDYEREVKGSREKVISDKDLEL 800
Query: 1196 AL 1197
L
Sbjct: 801 LL 802
Score = 59 (25.8 bits), Expect = 7.8e-90, Sum P(4) = 7.8e-90
Identities = 13/32 (40%), Positives = 18/32 (56%)
Query: 714 ETQATLASANFFGMISVIMQLRKVCNHPDLFE 745
ET + S + +++M LRK CNHP L E
Sbjct: 548 ETNIPVESEVNLKLQNIMMLLRKCCNHPYLIE 579
Score = 44 (20.5 bits), Expect = 4.5e-45, Sum P(3) = 4.5e-45
Identities = 13/52 (25%), Positives = 27/52 (51%)
Query: 1774 RQQDDKVSNFDRREDGP-----VIEQLDLTLEFQRELVDSTISFPPRVNLSV 1820
R++ K N+ + +D P +I Q+ ++ +R +V++ I VNL +
Sbjct: 510 RRRARKSINYSKIDDFPNELEKLISQMQPEVDRERAVVETNIPVESEVNLKL 561
Score = 43 (20.2 bits), Expect = 5.7e-45, Sum P(3) = 5.7e-45
Identities = 21/81 (25%), Positives = 38/81 (46%)
Query: 967 LSPLLFPIRPAIVRRQVYFPDRRLIQFDCG-KLQELAILLRKLKSDGHRALI---FTQMT 1022
L L+ ++P + R + ++ + KLQ + +LLRK + H LI +T
Sbjct: 529 LEKLISQMQPEVDRERAVVETNIPVESEVNLKLQNIMMLLRKCCN--HPYLIEYPIDPVT 586
Query: 1023 KMLDILEEFISLYGYTYMRLD 1043
+ I EE ++ G ++ LD
Sbjct: 587 QEFKIDEELVTNSG-KFLILD 606
Score = 38 (18.4 bits), Expect = 7.8e-90, Sum P(4) = 7.8e-90
Identities = 19/90 (21%), Positives = 39/90 (43%)
Query: 38 EKLVLYKHQMEVDVRKKKALDKQLEFLLGQTERYSSMLAENL----VDSHKPVQQSPMRE 93
E+ ++ K +M D ++L+ LL ++ YS L + ++ K ++ ++
Sbjct: 45 ERKMIEKARMSWDRESVDIRYRRLQHLLEKSNIYSKFLLTKMEQQQLEEQKKKEKLERKK 104
Query: 94 QPGIQYKEADENGAEE--PGVQSKEADEDD 121
+ K + GA E P V K+ +D
Sbjct: 105 ETLKVTKGKNSIGASEENPVVTRKKRGRED 134
>UNIPROTKB|E1B7X9 [details] [associations]
symbol:SMARCAD1 "SWI/SNF-related matrix-associated
actin-dependent regulator of chromatin subfamily A containing
DEAD/H box 1" species:9913 "Bos taurus" [GO:0035861 "site of
double-strand break" evidence=ISS] [GO:0043044 "ATP-dependent
chromatin remodeling" evidence=ISS] [GO:0000729 "DNA double-strand
break processing" evidence=ISS] [GO:0070933 "histone H4
deacetylation" evidence=ISS] [GO:0070932 "histone H3 deacetylation"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0000792
"heterochromatin" evidence=ISS] [GO:0051304 "chromosome separation"
evidence=ISS] [GO:0043596 "nuclear replication fork" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0000018 "regulation of
DNA recombination" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR003892
InterPro:IPR009060 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51140
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0003677 GO:GO:0043596 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0043044 SUPFAM:SSF46934
GO:GO:0000792 GO:GO:0070932 GO:GO:0070933 GO:GO:0000729
GO:GO:0000018 GO:GO:0035861 GeneTree:ENSGT00630000089890
GO:GO:0051304 EMBL:DAAA02016925 EMBL:DAAA02016926 IPI:IPI00826348
UniGene:Bt.77636 Ensembl:ENSBTAT00000047936 OMA:KNQRGIQ
Uniprot:E1B7X9
Length = 1028
Score = 603 (217.3 bits), Expect = 1.6e-89, Sum P(2) = 1.6e-89
Identities = 134/317 (42%), Positives = 189/317 (59%)
Query: 432 QPTGITFSTTQVRTKFPFLLK--FPLREYQHIGLDWLVTMYEKRLNGILADEMGLGKTIM 489
Q T +T + T+ P +L L+ YQ +GL+WL +++ LNGILADEMGLGKTI
Sbjct: 474 QVTMLTGNGGGWNTEQPSILNQSLSLKPYQKVGLNWLALVHKHGLNGILADEMGLGKTIQ 533
Query: 490 TIAMLAHLACEKGIWGPHLIVVPTSVMLNWETEFLKWCPAFKILTYFGSAKERKFKRQG- 548
IA LA+L ++G GPHLIVVP S + NW E WCP K+L Y+GS +ERK R
Sbjct: 534 AIAFLAYLY-QEGNKGPHLIVVPASTIDNWLREVNLWCPTLKVLCYYGSQEERKQIRYNI 592
Query: 549 WLKPNSFHVCITTYRLIIQ---DSKVFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSK 605
+ ++V +TTY I D +F+R K Y I DE H++KN S R+Q L+ N+
Sbjct: 593 HSRYEEYNVIVTTYNCAISSSDDRSLFRRLKLNYAIFDEGHMLKNMGSIRYQHLMTINAN 652
Query: 606 RRILLTGTPLQNDLMELWSLMHFLMPHIFQSH-QEFKDWFCNPISGMVEGQEKVNKEVVD 664
R+LLTGTP+QN+L+EL SL++F+MPH+F S E + F + E Q KE +
Sbjct: 653 NRLLLTGTPVQNNLLELMSLLNFVMPHMFSSSTSEIRRMFSSKTKPADE-QSIYEKERIA 711
Query: 665 RLHNVLRPFILRRLKRDVEKQLPMKQEHVIYCRLSKRQRNLYEDFIASSETQATLASANF 724
+++PFILRR+K +V KQLP K++ + C +S++Q LY + + N
Sbjct: 712 HAKQIIKPFILRRVKEEVLKQLPPKKDRIELCAMSEKQEQLYMNLFNRLKKSINNMEKNT 771
Query: 725 FGMISVIMQLRKVCNHP 741
M +V+MQLRK+ NHP
Sbjct: 772 -EMCNVMMQLRKMANHP 787
Score = 381 (139.2 bits), Expect = 1.6e-89, Sum P(2) = 1.6e-89
Identities = 77/154 (50%), Positives = 106/154 (68%)
Query: 987 DRRLIQFDCGKLQELAILLRKLKSDGHRALIFTQMTKMLDILEEFISLYGYTYMRLDGST 1046
D LI D GK + L +L +LK G R ++F+Q T MLDILE + + + Y+RLDG T
Sbjct: 848 DMDLI-LDSGKFRVLGCILSELKQKGDRVVLFSQFTMMLDILEVLLKHHQHRYLRLDGKT 906
Query: 1047 QPEERQTLMQRFNTNPKIFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQDRCH 1106
Q ER L+ FNT+ IF+F+LST++GG+GINL A+ VI +D D NP D+QA+DRCH
Sbjct: 907 QISERIHLIDEFNTDMDIFVFLLSTKAGGLGINLTSANVVILHDIDCNPYNDKQAEDRCH 966
Query: 1107 RIGQTREVHIYRLISESTIEENILKKANQKRALD 1140
R+GQT+EV + +LI + TIEE++LK QK L+
Sbjct: 967 RVGQTKEVLVIKLIGQGTIEESMLKINQQKLKLE 1000
Score = 39 (18.8 bits), Expect = 3.5e-29, Sum P(2) = 3.5e-29
Identities = 18/79 (22%), Positives = 37/79 (46%)
Query: 212 VVEEGHVQGN-GN----DLL---AGSKLDTSGSLVRR-CDEINGGLSISENHLLDIETSQ 262
+ +EGH+ N G+ L+ A ++L +G+ V+ E+ L+ H+ TS+
Sbjct: 628 IFDEGHMLKNMGSIRYQHLMTINANNRLLLTGTPVQNNLLELMSLLNFVMPHMFSSSTSE 687
Query: 263 VRDTSKKSGASTQKQALYD 281
+R +Q++Y+
Sbjct: 688 IRRMFSSKTKPADEQSIYE 706
>UNIPROTKB|F1NAD2 [details] [associations]
symbol:SMARCAD1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0000018 "regulation of
DNA recombination" evidence=IEA] [GO:0000729 "DNA double-strand
break processing" evidence=IEA] [GO:0000792 "heterochromatin"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0035861
"site of double-strand break" evidence=IEA] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=IEA] [GO:0043596
"nuclear replication fork" evidence=IEA] [GO:0051304 "chromosome
separation" evidence=IEA] [GO:0070932 "histone H3 deacetylation"
evidence=IEA] [GO:0070933 "histone H4 deacetylation" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR003892
InterPro:IPR009060 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51140
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003677
GO:GO:0043596 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 SUPFAM:SSF46934 GO:GO:0000792 GO:GO:0070932
GO:GO:0070933 GO:GO:0000018 GeneTree:ENSGT00630000089890
GO:GO:0051304 OMA:KNQRGIQ EMBL:AADN02016061 EMBL:AADN02016062
EMBL:AADN02016063 EMBL:AADN02016064 EMBL:AADN02016065
EMBL:AADN02016066 EMBL:AADN02016067 IPI:IPI00583150
Ensembl:ENSGALT00000016936 Uniprot:F1NAD2
Length = 963
Score = 605 (218.0 bits), Expect = 2.1e-89, Sum P(3) = 2.1e-89
Identities = 129/294 (43%), Positives = 184/294 (62%)
Query: 455 LREYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTIAMLAHLACEKGIWGPHLIVVPTS 514
L+ YQ IGL+WL +++ LNGILADEMGLGKTI IA LAH+ ++G GPHLIVVP S
Sbjct: 433 LKPYQKIGLNWLALLHKHGLNGILADEMGLGKTIQAIAFLAHIY-QEGDRGPHLIVVPAS 491
Query: 515 VMLNWETEFLKWCPAFKILTYF-GSAKERKFKRQGWL-KPNSFHVCITTYRLIIQ---DS 569
+ NW E WCP +L Y+ GS ++RK R + F+V +TTY I D
Sbjct: 492 TLDNWIREVNLWCPELNVLFYYVGSQEDRKHLRADISNRVVDFNVIVTTYNCAISSSDDR 551
Query: 570 KVFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPLQNDLMELWSLMHFL 629
+F++ K Y I DE H++KN S R+Q L+ N+K R+LLTGTP+QN+L+EL SL++F+
Sbjct: 552 SLFRKVKLNYAIFDEGHMLKNMSSVRYQQLMRINAKHRLLLTGTPVQNNLLELMSLLNFV 611
Query: 630 MPHIFQSH-QEFKDWFCNPISGMVEGQEKVNKEVVDRLHNVLRPFILRRLKRDVEKQLPM 688
MPH+F S E + F + E Q KE + +++PFILRR+K +V KQLP
Sbjct: 612 MPHMFSSSTSEIRRMFSSKAK-TAEEQSTYEKERIAHAKQIIKPFILRRVKDEVLKQLPP 670
Query: 689 KQEHVIYCRLSKRQRNLYEDFIASSETQATL-ASANFFGMISVIMQLRKVCNHP 741
K++H+ C +S++Q LY D + ++ + T+ + M + +MQLRK+ NHP
Sbjct: 671 KKDHIELCAMSEKQEQLYCDLL--NKLKKTMKGNEKNSDMGNAMMQLRKMANHP 722
Score = 384 (140.2 bits), Expect = 2.1e-89, Sum P(3) = 2.1e-89
Identities = 76/147 (51%), Positives = 104/147 (70%)
Query: 994 DCGKLQELAILLRKLKSDGHRALIFTQMTKMLDILEEFISLYGYTYMRLDGSTQPEERQT 1053
D GK + L LL LK G R ++F+Q T +LDILE F+ + + Y+RLDG TQ +R
Sbjct: 789 DSGKFRVLERLLSDLKEKGDRVVLFSQFTMVLDILEVFLKHWQHRYIRLDGKTQISDRIH 848
Query: 1054 LMQRFNTNPKIFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQDRCHRIGQTRE 1113
L+ FNT+ IF+F+LST++GG+GINL A+ VI +D D NP D+QA+DRCHR+GQTRE
Sbjct: 849 LIDEFNTDMDIFVFLLSTKAGGLGINLTSANVVILHDIDCNPYNDKQAEDRCHRVGQTRE 908
Query: 1114 VHIYRLISESTIEENILKKANQKRALD 1140
V + +LIS+ TIEE++LK QK L+
Sbjct: 909 VKVIKLISKGTIEESMLKMNQQKLKLE 935
Score = 39 (18.8 bits), Expect = 3.0e-53, Sum P(3) = 3.0e-53
Identities = 12/36 (33%), Positives = 19/36 (52%)
Query: 993 FDCGKLQELAILLRKLKS--DGHRALIFTQMTKMLD 1026
+ KL+ ++ L+ K + D + LIF MT M D
Sbjct: 729 YTADKLKTMSKLMLKEPTHCDANPDLIFEDMTVMTD 764
Score = 39 (18.8 bits), Expect = 1.3e-29, Sum P(2) = 1.3e-29
Identities = 6/28 (21%), Positives = 14/28 (50%)
Query: 254 HLLDIETSQVRDTSKKSGASTQKQALYD 281
H+ TS++R + ++Q+ Y+
Sbjct: 614 HMFSSSTSEIRRMFSSKAKTAEEQSTYE 641
Score = 38 (18.4 bits), Expect = 2.1e-89, Sum P(3) = 2.1e-89
Identities = 7/25 (28%), Positives = 13/25 (52%)
Query: 254 HLLDIETSQVRDTSKKSGASTQKQA 278
H LD+ + + +K AS + +A
Sbjct: 25 HFLDVSSDSEDEVPRKVSASKENKA 49
>ZFIN|ZDB-GENE-091113-61 [details] [associations]
symbol:si:dkey-76p7.6 "si:dkey-76p7.6" species:7955
"Danio rerio" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0000729 "DNA double-strand break processing" evidence=ISS]
[GO:0035861 "site of double-strand break" evidence=ISS] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=ISS] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0005694 "chromosome" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR003892
InterPro:IPR009060 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51140
PROSITE:PS51194 SMART:SM00490 ZFIN:ZDB-GENE-091113-61 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0043044 SUPFAM:SSF46934
GO:GO:0000729 GO:GO:0035861 GeneTree:ENSGT00630000089890
EMBL:BX927385 IPI:IPI00901431 Ensembl:ENSDART00000113101
Bgee:E7F1C4 Uniprot:E7F1C4
Length = 954
Score = 615 (221.5 bits), Expect = 2.1e-89, Sum P(2) = 2.1e-89
Identities = 128/294 (43%), Positives = 187/294 (63%)
Query: 453 FPLREYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTIAMLAHLACEKGIWGPHLIVVP 512
F L+ YQ IGL+WLV +++ +L+GILADEMGLGKTI I+ LAHL ++G GPHLI VP
Sbjct: 427 FQLKPYQLIGLNWLVLLHQNKLSGILADEMGLGKTIQAISFLAHLY-QEGNHGPHLITVP 485
Query: 513 TSVMLNWETEFLKWCPAFKILTYFGSAKERKFKRQGWLKPN-SFHVCITTYRLII---QD 568
S + NW E WCP+FK+L Y+GSA +RK+ R L +++ ++TY L I D
Sbjct: 486 ASTLDNWVRELNLWCPSFKVLVYYGSADDRKYMRYEILNQIVEYNIIVSTYNLAIGNSSD 545
Query: 569 SKVFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPLQNDLMELWSLMHF 628
+F + K +Y + DE HL+KN S R++ L+ N+K R+LLTGTPLQN+L+EL SL++F
Sbjct: 546 RSLFCKLKLEYAVFDEGHLLKNMNSLRYRHLMAINAKYRLLLTGTPLQNNLLELMSLLNF 605
Query: 629 LMPHIFQSH-QEFKDWFCNPISGMVEGQEKVNKEVVDRLHNVLRPFILRRLKRDVEKQLP 687
+MP++F S + F S E Q ++ + +++PFILRR+K +V KQLP
Sbjct: 606 IMPNMFSSSTSQIAKMFSMKSS---EEQSSFERDRITHAKLIMKPFILRRVKSEVLKQLP 662
Query: 688 MKQEHVIYCRLSKRQRNLYEDFIASSETQATLASANFFGMISVIMQLRKVCNHP 741
K+E V +C +S+RQ+ LY + + + + +V+MQLRK+ NHP
Sbjct: 663 AKEEQVEFCAMSERQQELYSALLHKLKHSSNGEKRE---LTNVMMQLRKMSNHP 713
Score = 363 (132.8 bits), Expect = 2.1e-89, Sum P(2) = 2.1e-89
Identities = 72/150 (48%), Positives = 102/150 (68%)
Query: 991 IQFDCGKLQELAILLRKLKSDGHRALIFTQMTKMLDILEEFISLYGYTYMRLDGSTQPEE 1050
+ D GKL L LL LK G R ++F+Q T MLDILE F+ + + Y RLDGST +
Sbjct: 777 VLLDSGKLSLLTQLLNSLKEKGDRVVLFSQFTMMLDILEVFLRHHKHRYNRLDGSTPMSD 836
Query: 1051 RQTLMQRFNTNPKIFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQDRCHRIGQ 1110
R L+ +FNT+ IF+F+LSTR+GG+GINL A+ VI +D D NP D+QA+ RCHR+GQ
Sbjct: 837 RIGLIDQFNTDQDIFVFLLSTRAGGLGINLTSANVVILHDIDCNPYNDKQAEGRCHRVGQ 896
Query: 1111 TREVHIYRLISESTIEENILKKANQKRALD 1140
T+ V + +LIS+ +IE+ +L+ +K L+
Sbjct: 897 TKTVKVIKLISKDSIEDTMLRIGERKLKLE 926
>RGD|1309640 [details] [associations]
symbol:Smarcad1 "SWI/SNF-related, matrix-associated
actin-dependent regulator of chromatin, subfamily a, containing
DEAD/H box 1`" species:10116 "Rattus norvegicus" [GO:0000018
"regulation of DNA recombination" evidence=IEA;ISO] [GO:0000729
"DNA double-strand break processing" evidence=ISO;ISS] [GO:0000792
"heterochromatin" evidence=ISO;ISS] [GO:0003677 "DNA binding"
evidence=IEA;ISO] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO;ISS] [GO:0035861 "site of double-strand break"
evidence=ISO;ISS] [GO:0043044 "ATP-dependent chromatin remodeling"
evidence=ISO;ISS] [GO:0043596 "nuclear replication fork"
evidence=IEA;ISO] [GO:0051304 "chromosome separation"
evidence=ISO;ISS] [GO:0070932 "histone H3 deacetylation"
evidence=ISO;ISS] [GO:0070933 "histone H4 deacetylation"
evidence=ISO;ISS] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR003892
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51140 PROSITE:PS51194
SMART:SM00490 RGD:1309640 GO:GO:0005524 GO:GO:0005634 GO:GO:0003677
GO:GO:0043596 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0043044 GO:GO:0000792 GO:GO:0070932
GO:GO:0070933 GO:GO:0000729 GO:GO:0000018 GO:GO:0035861 KO:K14439
GeneTree:ENSGT00630000089890 GO:GO:0051304 OMA:KNQRGIQ CTD:56916
OrthoDB:EOG4RV2QW EMBL:AABR03032021 IPI:IPI00765483
RefSeq:NP_001101334.2 UniGene:Rn.7758 ProteinModelPortal:D3Z9Z9
Ensembl:ENSRNOT00000008585 GeneID:312398 KEGG:rno:312398
UCSC:RGD:1309640 Uniprot:D3Z9Z9
Length = 1024
Score = 591 (213.1 bits), Expect = 7.8e-89, Sum P(2) = 7.8e-89
Identities = 130/301 (43%), Positives = 180/301 (59%)
Query: 448 PFLLK--FPLREYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTIAMLAHLACEKGIWG 505
P LL L+ YQ +GL+WL +++ LNGILADEMGLGKTI IA LA+L ++G G
Sbjct: 486 PSLLNQSLSLKPYQKVGLNWLALVHKHGLNGILADEMGLGKTIQAIAFLAYLF-QEGNKG 544
Query: 506 PHLIVVPTSVMLNWETEFLKWCPAFKILTYFGSAKERKFKRQG-WLKPNSFHVCITTYRL 564
PHLIVVP S + NW E WCP +L Y+GS +ERK R K ++V +TTY
Sbjct: 545 PHLIVVPASTIDNWLREVNLWCPTLNVLCYYGSQEERKQIRFNIHNKYEDYNVIVTTYNC 604
Query: 565 IIQ---DSKVFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPLQNDLME 621
I D +F+R K Y I DE H++KN S R+Q L+ N++ R+LLTGTP+QN+L+E
Sbjct: 605 AISSSDDRSLFRRLKLNYAIFDEGHMLKNMGSIRYQHLMTINARNRLLLTGTPVQNNLLE 664
Query: 622 LWSLMHFLMPHIFQSH-QEFKDWFCNPISGMVEGQEKVNKEVVDRLHNVLRPFILRRLKR 680
L SL++F+MPH+F S E + F + E Q KE + +++PFILRR+K
Sbjct: 665 LMSLLNFVMPHMFSSSTSEIRRMFSSKTKPADE-QSIYEKERIAHAKQIIKPFILRRVKE 723
Query: 681 DVEKQLPMKQEHVIYCRLSKRQRNLYEDFIASSETQATLASANFFGMISVIMQLRKVCNH 740
+V K LP K++ + C +S++Q LY + N M +V+MQLRK+ NH
Sbjct: 724 EVLKLLPPKKDQIELCAMSEKQEQLYSGLFNRLKKSINNLEKNT-EMCNVMMQLRKMANH 782
Query: 741 P 741
P
Sbjct: 783 P 783
Score = 387 (141.3 bits), Expect = 7.8e-89, Sum P(2) = 7.8e-89
Identities = 79/157 (50%), Positives = 108/157 (68%)
Query: 984 YFPDRRLIQFDCGKLQELAILLRKLKSDGHRALIFTQMTKMLDILEEFISLYGYTYMRLD 1043
Y D LI D GK + L +L +LK G R ++F+Q T MLDILE + + + Y+RLD
Sbjct: 841 YQLDMDLI-LDSGKFRTLGCILSELKQKGDRVVLFSQFTMMLDILEVLLKHHQHRYLRLD 899
Query: 1044 GSTQPEERQTLMQRFNTNPKIFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQD 1103
G TQ ER L+ FNT+ IF+F+LST++GG+GINL A+ VI +D D NP D+QA+D
Sbjct: 900 GKTQISERIHLIDEFNTDMDIFVFLLSTKAGGLGINLTSANVVILHDIDCNPYNDKQAED 959
Query: 1104 RCHRIGQTREVHIYRLISESTIEENILKKANQKRALD 1140
RCHR+GQT+EV + +LIS+ TIEE++LK QK L+
Sbjct: 960 RCHRVGQTKEVLVIKLISQGTIEESMLKINQQKLKLE 996
Score = 37 (18.1 bits), Expect = 1.3e-29, Sum P(2) = 1.3e-29
Identities = 18/79 (22%), Positives = 37/79 (46%)
Query: 212 VVEEGHVQGN-GN----DLL---AGSKLDTSGSLVRR-CDEINGGLSISENHLLDIETSQ 262
+ +EGH+ N G+ L+ A ++L +G+ V+ E+ L+ H+ TS+
Sbjct: 624 IFDEGHMLKNMGSIRYQHLMTINARNRLLLTGTPVQNNLLELMSLLNFVMPHMFSSSTSE 683
Query: 263 VRDTSKKSGASTQKQALYD 281
+R +Q++Y+
Sbjct: 684 IRRMFSSKTKPADEQSIYE 702
>MGI|MGI:106209 [details] [associations]
symbol:Hells "helicase, lymphoid specific" species:10090 "Mus
musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0000775 "chromosome, centromeric region" evidence=IDA]
[GO:0001655 "urogenital system development" evidence=IMP]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IDA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005721 "centromeric heterochromatin"
evidence=IDA] [GO:0006306 "DNA methylation" evidence=IMP]
[GO:0006342 "chromatin silencing" evidence=IMP] [GO:0006346
"methylation-dependent chromatin silencing" evidence=IMP]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IMP] [GO:0010216 "maintenance of DNA
methylation" evidence=IMP] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0030098 "lymphocyte differentiation"
evidence=TAS] [GO:0031508 "centromeric heterochromatin assembly"
evidence=IMP] [GO:0043066 "negative regulation of apoptotic
process" evidence=IMP] [GO:0051301 "cell division" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 MGI:MGI:106209 GO:GO:0005524
GO:GO:0005634 GO:GO:0043066 GO:GO:0051301 GO:GO:0007067
GO:GO:0003677 GO:GO:0006351 GO:GO:0003682 GO:GO:0001655
GO:GO:0004386 GO:GO:0005721 HSSP:Q97XQ5 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0031508
GO:GO:0010216 HOGENOM:HOG000172362 OMA:ETFYTAI GO:GO:0006346
GO:GO:0030098 GO:GO:0046651 CTD:3070 HOVERGEN:HBG060049
OrthoDB:EOG4SN1N4 EMBL:U25691 EMBL:AF155210 EMBL:AK013266
EMBL:AK147126 EMBL:BC020056 EMBL:BC100394 IPI:IPI00121431
IPI:IPI00808497 PIR:JC4666 RefSeq:NP_032260.2 UniGene:Mm.392920
UniGene:Mm.486446 UniGene:Mm.57223 ProteinModelPortal:Q60848
SMR:Q60848 DIP:DIP-43735N IntAct:Q60848 MINT:MINT-2521001
STRING:Q60848 PhosphoSite:Q60848 PaxDb:Q60848 PRIDE:Q60848
DNASU:15201 Ensembl:ENSMUST00000025965 GeneID:15201 KEGG:mmu:15201
UCSC:uc008hjt.1 GeneTree:ENSGT00550000075106 InParanoid:Q60848
NextBio:287739 Bgee:Q60848 CleanEx:MM_HELLS Genevestigator:Q60848
GermOnline:ENSMUSG00000025001 Uniprot:Q60848
Length = 821
Score = 516 (186.7 bits), Expect = 7.8e-89, Sum P(3) = 7.8e-89
Identities = 110/263 (41%), Positives = 162/263 (61%)
Query: 455 LREYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTIAMLAHLACEKGIWGPHLIVVPTS 514
+R YQ G++WL ++E +NGILADEMGLGKT+ IA +A L ++G+ GP L+ P S
Sbjct: 206 MRWYQVEGMEWLRMLWENGINGILADEMGLGKTVQCIATIA-LMIQRGVPGPFLVCGPLS 264
Query: 515 VMLNWETEFLKWCPAFKILTYFGSAKERK------FKRQGWLKPNSFHVCITTYRLIIQD 568
+ NW EF ++ P L Y G+ ++R+ KRQG L+ + V +T++ + ++D
Sbjct: 265 TLPNWMAEFKRFTPEIPTLLYHGTREDRRKLVKNIHKRQGTLQIHP--VVVTSFEIAMRD 322
Query: 569 SKVFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPLQNDLMELWSLMHF 628
+ WKYLI+DE H IKN K + + L FN+ ++LLTGTPLQN+L ELWSL++F
Sbjct: 323 QNALQHCYWKYLIVDEGHRIKNMKCRLIRELKRFNADNKLLLTGTPLQNNLSELWSLLNF 382
Query: 629 LMPHIFQSHQEFKDWFCNPISGMVEGQEKV-NKE----VVDRLHNVLRPFILRRLKRDVE 683
L+P +F + F+ WF I+ + E E + KE V+ LH +L PF+LRRLK DV
Sbjct: 383 LLPDVFDDLKSFESWF--DITSLSETAEDIIAKEREQNVLHMLHQILTPFLLRRLKSDVA 440
Query: 684 KQLPMKQEHVIYCRLSKRQRNLY 706
++P K+E V+Y L +Q Y
Sbjct: 441 LEVPPKREVVVYAPLCNKQEIFY 463
Score = 450 (163.5 bits), Expect = 7.8e-89, Sum P(3) = 7.8e-89
Identities = 106/256 (41%), Positives = 148/256 (57%)
Query: 962 KCSEVLSPLLFPIRPAIVRRQVYFPDRRLIQFDCGKLQELAILLRKLKSDGHRALIFTQM 1021
KC + +PI P Q + D L+ + GK L +L +LK GH+ L+F+QM
Sbjct: 552 KCCNHPYMIEYPIDPVT---QEFKIDEELVT-NSGKFLILDRMLPELKKRGHKVLVFSQM 607
Query: 1022 TKMLDILEEFISLYGYTYMRLDGSTQPEERQTLMQRFNTNPKIFLFILSTRSGGVGINLV 1081
T MLDIL ++ L + + RLDGS ER+ + FNT+P +FLF++STR+GG+GINL
Sbjct: 608 TSMLDILMDYCHLRNFIFSRLDGSMSYSEREKNIYSFNTDPDVFLFLVSTRAGGLGINLT 667
Query: 1082 GADTVIFYDSDWNPAMDQQAQDRCHRIGQTREVHIYRLISESTIEENILKKANQKRALDD 1141
ADTVI YDSDWNP D QAQDRCHRIGQT+ V +YRL++ +TI++ I+++A KR L+
Sbjct: 668 AADTVIIYDSDWNPQSDLQAQDRCHRIGQTKPVVVYRLVTANTIDQKIVERAAAKRKLEK 727
Query: 1142 LVIQS----GGYNTEFFKK--LDPMELFSGHRTLPMKTMQKEKAINNGNEVSLSNADVEA 1195
L+I GG + K LD EL +K+ E+ + E +S+ D+E
Sbjct: 728 LIIHKNHFKGGQSGLSQSKNFLDAKELME-----LLKSRDYEREVKGSREKVISDEDLEL 782
Query: 1196 ALKCVEDEADYMALKR 1211
L D D M R
Sbjct: 783 LLDR-SDLIDQMKASR 797
Score = 55 (24.4 bits), Expect = 7.8e-89, Sum P(3) = 7.8e-89
Identities = 9/17 (52%), Positives = 13/17 (76%)
Query: 729 SVIMQLRKVCNHPDLFE 745
+++M LRK CNHP + E
Sbjct: 545 NIMMLLRKCCNHPYMIE 561
>ZFIN|ZDB-GENE-050522-499 [details] [associations]
symbol:smarcad1 "SWI/SNF-related, matrix-associated
actin-dependent regulator of chromatin, subfamily a, containing
DEAD/H box 1" species:7955 "Danio rerio" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0043044 "ATP-dependent chromatin
remodeling" evidence=ISS] [GO:0000729 "DNA double-strand break
processing" evidence=ISS] [GO:0035861 "site of double-strand break"
evidence=ISS] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0005694 "chromosome" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0006974 "response to DNA damage
stimulus" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR003892 InterPro:IPR009060 Pfam:PF00176 Pfam:PF00271
PROSITE:PS51140 PROSITE:PS51194 SMART:SM00490
ZFIN:ZDB-GENE-050522-499 GO:GO:0005524 GO:GO:0005634 GO:GO:0003677
GO:GO:0004386 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0043044 SUPFAM:SSF46934 GO:GO:0000729 HOGENOM:HOG000172362
GO:GO:0035861 GeneTree:ENSGT00630000089890 OMA:KEERYMA
HOVERGEN:HBG055804 EMBL:AL807792 IPI:IPI00492619 UniGene:Dr.3950
ProteinModelPortal:B0R061 Ensembl:ENSDART00000091409
ArrayExpress:B0R061 Bgee:B0R061 Uniprot:B0R061
Length = 972
Score = 610 (219.8 bits), Expect = 9.0e-89, Sum P(5) = 9.0e-89
Identities = 128/292 (43%), Positives = 187/292 (64%)
Query: 455 LREYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTIAMLAHLACEKGIWGPHLIVVPTS 514
L+ YQ IGL WL+ +++ +L+GILADEMGLGKTI IA LAHL EKGI GPHLI VP+S
Sbjct: 448 LQAYQLIGLKWLILLHQHKLSGILADEMGLGKTIQAIAFLAHLY-EKGIKGPHLITVPSS 506
Query: 515 VMLNWETEFLKWCPAFKILTYFGSAKERKFKRQGWLKPN-SFHVCITTYRLII---QDSK 570
+ NW E WCP+ K+L Y+GS ++RK+ RQ L F++ ++TY L I D
Sbjct: 507 TLDNWVRELGLWCPSLKVLIYYGSVEDRKYLRQDILTGLIDFNIIVSTYNLTIGNDHDRS 566
Query: 571 VFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPLQNDLMELWSLMHFLM 630
+F++ K KY + DE H++KN S R++ L+ N++ R+LLTGTPLQN+L+EL SL++F+M
Sbjct: 567 LFRKLKLKYAVFDEGHMLKNMNSLRYRHLMTINAEHRLLLTGTPLQNNLLELMSLLNFIM 626
Query: 631 PHIFQSH-QEFKDWFCNPISGMVEGQEKVNKEVVDRLHNVLRPFILRRLKRDVEKQLPMK 689
P +F S + F S E + +K+ + + +++PFILRR+K +V K+LP K
Sbjct: 627 PSMFSSSTSQISKMFSTRSS---EEESSFHKDRIAQARLIMKPFILRRVKSEVLKELPPK 683
Query: 690 QEHVIYCRLSKRQRNLYEDFIASSETQATLASANFFGMISVIMQLRKVCNHP 741
E + C +S Q LY+ I + T + + + +V+MQLRK+ NHP
Sbjct: 684 MEKIEMCPMSDAQHKLYD--ILFKRLKKT-PNGDKRELCNVMMQLRKMANHP 732
Score = 380 (138.8 bits), Expect = 9.0e-89, Sum P(5) = 9.0e-89
Identities = 82/174 (47%), Positives = 114/174 (65%)
Query: 987 DRRLIQFDCGKLQELAILLRKLKSDGHRALIFTQMTKMLDILEEFISLYGYTYMRLDGST 1046
++ LI D GK L L KLK G R ++F+Q T MLDI+E + + Y+RLDGST
Sbjct: 793 EKALI-LDSGKFALLTKTLAKLKEKGDRVVLFSQFTMMLDIVEILLKHLDHQYVRLDGST 851
Query: 1047 QPEERQTLMQRFNTNPKIFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQDRCH 1106
ER L+ ++NTNP+IF+F+LSTR+GG GINL A+TVI +D D NP D+QA+DRCH
Sbjct: 852 PMAERIGLIDKYNTNPEIFVFLLSTRAGGQGINLASANTVILHDIDCNPFNDKQAEDRCH 911
Query: 1107 RIGQTREVHIYRLISESTIEENILKKANQKRALD-DLVIQSG--GYNTEFFKKL 1157
R+GQTR V + +LIS+ +IE+ +L+ +K L+ D+ G G TE +L
Sbjct: 912 RMGQTRTVQVIKLISKDSIEDCMLRVGQEKLKLEQDMTTDEGEDGAITEQMAEL 965
Score = 51 (23.0 bits), Expect = 1.3e-54, Sum P(5) = 1.3e-54
Identities = 23/88 (26%), Positives = 38/88 (43%)
Query: 1171 MKTMQKEKAIN--NGNEVSLSNADVEAAL-KCVEDEADYMALKRAEQEEAVDNQEFTEEA 1227
+ T + IN + N V L + D K ED M R Q + +++ E+
Sbjct: 874 LSTRAGGQGINLASANTVILHDIDCNPFNDKQAEDRCHRMGQTRTVQVIKLISKDSIEDC 933
Query: 1228 VGRPEDDELVIEDTVRTDEPTDQGGCMT 1255
+ R ++L +E + TDE D G +T
Sbjct: 934 MLRVGQEKLKLEQDMTTDEGED--GAIT 959
Score = 42 (19.8 bits), Expect = 1.1e-53, Sum P(5) = 1.1e-53
Identities = 16/59 (27%), Positives = 25/59 (42%)
Query: 1743 KSTREPARRVKFTNLGQSSKLLSA-ALHDANSRQQDDKVS-----NFDRREDGPVIEQL 1795
K + R+ T Q KL+S ++ D R +K+ D EDG + EQ+
Sbjct: 904 KQAEDRCHRMGQTRTVQVIKLISKDSIEDCMLRVGQEKLKLEQDMTTDEGEDGAITEQM 962
Score = 41 (19.5 bits), Expect = 9.0e-89, Sum P(5) = 9.0e-89
Identities = 12/31 (38%), Positives = 15/31 (48%)
Query: 249 SISENHLLDIETSQVRDTSKKSGASTQKQAL 279
S S + L +S V + S S TQK AL
Sbjct: 252 SSSLSRWLTAASSHVPEVSSMSALKTQKSAL 282
Score = 39 (18.8 bits), Expect = 6.9e-28, Sum P(3) = 6.9e-28
Identities = 8/28 (28%), Positives = 19/28 (67%)
Query: 655 QEKVNKEVVDRLHNVLRPFILRRLKRDV 682
Q+ +NK++ D++ +L F ++ K+D+
Sbjct: 76 QQHINKDMEDKIIKLLEIFP-QKSKKDL 102
Score = 37 (18.1 bits), Expect = 9.0e-89, Sum P(5) = 9.0e-89
Identities = 6/17 (35%), Positives = 11/17 (64%)
Query: 114 SKEADEDDAEQHSGFEP 130
S E++++D+E EP
Sbjct: 155 SSESEDEDSEDEESEEP 171
Score = 37 (18.1 bits), Expect = 9.0e-89, Sum P(5) = 9.0e-89
Identities = 13/42 (30%), Positives = 18/42 (42%)
Query: 869 RCQKKPVYSTSLRELLTVKHPVCDILQQKTVRRSYLYSSKLA 910
R +K P + REL V + + + R Y S KLA
Sbjct: 706 RLKKTP--NGDKRELCNVMMQLRKMANHPLLHRQYYTSDKLA 745
>UNIPROTKB|E2RG62 [details] [associations]
symbol:SMARCAD1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0070933 "histone H4 deacetylation"
evidence=IEA] [GO:0070932 "histone H3 deacetylation" evidence=IEA]
[GO:0051304 "chromosome separation" evidence=IEA] [GO:0043596
"nuclear replication fork" evidence=IEA] [GO:0043044 "ATP-dependent
chromatin remodeling" evidence=IEA] [GO:0035861 "site of
double-strand break" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0000792 "heterochromatin" evidence=IEA]
[GO:0000729 "DNA double-strand break processing" evidence=IEA]
[GO:0000018 "regulation of DNA recombination" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR003892 InterPro:IPR009060 Pfam:PF00176 Pfam:PF00271
PROSITE:PS51140 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003677 GO:GO:0043596 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 SUPFAM:SSF46934 GO:GO:0000792
GO:GO:0070932 GO:GO:0070933 GO:GO:0000018
GeneTree:ENSGT00630000089890 GO:GO:0051304 EMBL:AAEX03016768
EMBL:AAEX03016769 Ensembl:ENSCAFT00000015951 Uniprot:E2RG62
Length = 1026
Score = 597 (215.2 bits), Expect = 3.2e-88, Sum P(3) = 3.2e-88
Identities = 128/292 (43%), Positives = 178/292 (60%)
Query: 455 LREYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTIAMLAHLACEKGIWGPHLIVVPTS 514
L+ YQ +GL+WL +++ LNGILADEMGLGKTI IA LA+L ++G GPHLIVVP S
Sbjct: 497 LKPYQKVGLNWLALVHKHGLNGILADEMGLGKTIQAIAFLAYLY-QEGNKGPHLIVVPAS 555
Query: 515 VMLNWETEFLKWCPAFKILTYFGSAKERKFKRQG-WLKPNSFHVCITTYRLIIQ---DSK 570
+ NW E WCP K+L Y+GS +ERK R K ++V +TTY I D
Sbjct: 556 TIDNWLREVNLWCPTLKVLCYYGSQEERKQIRYNIHSKYEEYNVIVTTYNCAISSSDDRS 615
Query: 571 VFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPLQNDLMELWSLMHFLM 630
+F+R K Y I DE H++KN S R+Q L+ N+ R+LLTGTP+QN+L+EL SL++F+M
Sbjct: 616 LFRRLKLNYAIFDEGHMLKNMGSIRYQHLMTINANNRLLLTGTPVQNNLLELMSLLNFVM 675
Query: 631 PHIFQSH-QEFKDWFCNPISGMVEGQEKVNKEVVDRLHNVLRPFILRRLKRDVEKQLPMK 689
PH+F S E + F + E Q KE + +++PFILRR+K +V KQLP K
Sbjct: 676 PHMFSSSTSEIRRMFSSKTKSADE-QSIYEKERIAHAKQIIKPFILRRVKEEVLKQLPPK 734
Query: 690 QEHVIYCRLSKRQRNLYEDFIASSETQATLASANFFGMISVIMQLRKVCNHP 741
++ + C +S++Q LY + + M +V+MQLRK+ NHP
Sbjct: 735 KDQIELCAMSEKQEQLYLGLFNRLKKSINNIEKST-EMCNVMMQLRKMANHP 785
Score = 386 (140.9 bits), Expect = 3.2e-88, Sum P(3) = 3.2e-88
Identities = 81/167 (48%), Positives = 112/167 (67%)
Query: 987 DRRLIQFDCGKLQELAILLRKLKSDGHRALIFTQMTKMLDILEEFISLYGYTYMRLDGST 1046
D LI D GK + L +L +LK G R ++F+Q T MLDILE + + + Y+RLDG T
Sbjct: 846 DMDLI-LDSGKFRVLGCILSELKQKGDRVVLFSQFTMMLDILEVLLKHHQHRYLRLDGKT 904
Query: 1047 QPEERQTLMQRFNTNPKIFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQDRCH 1106
Q ER L+ FNT+ IF+F+LST++GG+GINL A+ VI +D D NP D+QA+DRCH
Sbjct: 905 QISERIHLIDEFNTDMDIFVFLLSTKAGGLGINLTSANVVILHDIDCNPYNDKQAEDRCH 964
Query: 1107 RIGQTREVHIYRLISESTIEENILKKANQKRALD-DLV-IQSGGYNT 1151
R+GQT+EV + +LIS+ TIEE++LK QK L+ D+ + G T
Sbjct: 965 RVGQTKEVLVIKLISQGTIEESMLKINQQKLKLEQDMTTVDEGDEGT 1011
Score = 44 (20.5 bits), Expect = 5.1e-29, Sum P(3) = 5.1e-29
Identities = 19/79 (24%), Positives = 38/79 (48%)
Query: 212 VVEEGHVQGN-GN----DLL---AGSKLDTSGSLVRR-CDEINGGLSISENHLLDIETSQ 262
+ +EGH+ N G+ L+ A ++L +G+ V+ E+ L+ H+ TS+
Sbjct: 626 IFDEGHMLKNMGSIRYQHLMTINANNRLLLTGTPVQNNLLELMSLLNFVMPHMFSSSTSE 685
Query: 263 VRDTSKKSGASTQKQALYD 281
+R S +Q++Y+
Sbjct: 686 IRRMFSSKTKSADEQSIYE 704
Score = 38 (18.4 bits), Expect = 3.2e-88, Sum P(3) = 3.2e-88
Identities = 14/59 (23%), Positives = 24/59 (40%)
Query: 68 TERYSSMLAENLVDSHKPVQQSPMREQPGIQYKE--ADENGAEEPG----VQSKEADED 120
TE+ ++ + S + Q GIQY + +D P VQ K+ ++D
Sbjct: 58 TEKTEDSSVPETTENERKASISYFKNQRGIQYIDLSSDSEDIVSPNCSSTVQEKKFNKD 116
>UNIPROTKB|J9NX47 [details] [associations]
symbol:SMARCAD1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR003892 InterPro:IPR009060 Pfam:PF00176 Pfam:PF00271
PROSITE:PS51140 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003677 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 SUPFAM:SSF46934 GeneTree:ENSGT00630000089890
EMBL:AAEX03016768 EMBL:AAEX03016769 Ensembl:ENSCAFT00000044961
Uniprot:J9NX47
Length = 1026
Score = 597 (215.2 bits), Expect = 3.2e-88, Sum P(3) = 3.2e-88
Identities = 128/292 (43%), Positives = 178/292 (60%)
Query: 455 LREYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTIAMLAHLACEKGIWGPHLIVVPTS 514
L+ YQ +GL+WL +++ LNGILADEMGLGKTI IA LA+L ++G GPHLIVVP S
Sbjct: 497 LKPYQKVGLNWLALVHKHGLNGILADEMGLGKTIQAIAFLAYLY-QEGNKGPHLIVVPAS 555
Query: 515 VMLNWETEFLKWCPAFKILTYFGSAKERKFKRQG-WLKPNSFHVCITTYRLIIQ---DSK 570
+ NW E WCP K+L Y+GS +ERK R K ++V +TTY I D
Sbjct: 556 TIDNWLREVNLWCPTLKVLCYYGSQEERKQIRYNIHSKYEEYNVIVTTYNCAISSSDDRS 615
Query: 571 VFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPLQNDLMELWSLMHFLM 630
+F+R K Y I DE H++KN S R+Q L+ N+ R+LLTGTP+QN+L+EL SL++F+M
Sbjct: 616 LFRRLKLNYAIFDEGHMLKNMGSIRYQHLMTINANNRLLLTGTPVQNNLLELMSLLNFVM 675
Query: 631 PHIFQSH-QEFKDWFCNPISGMVEGQEKVNKEVVDRLHNVLRPFILRRLKRDVEKQLPMK 689
PH+F S E + F + E Q KE + +++PFILRR+K +V KQLP K
Sbjct: 676 PHMFSSSTSEIRRMFSSKTKSADE-QSIYEKERIAHAKQIIKPFILRRVKEEVLKQLPPK 734
Query: 690 QEHVIYCRLSKRQRNLYEDFIASSETQATLASANFFGMISVIMQLRKVCNHP 741
++ + C +S++Q LY + + M +V+MQLRK+ NHP
Sbjct: 735 KDQIELCAMSEKQEQLYLGLFNRLKKSINNIEKST-EMCNVMMQLRKMANHP 785
Score = 386 (140.9 bits), Expect = 3.2e-88, Sum P(3) = 3.2e-88
Identities = 81/167 (48%), Positives = 112/167 (67%)
Query: 987 DRRLIQFDCGKLQELAILLRKLKSDGHRALIFTQMTKMLDILEEFISLYGYTYMRLDGST 1046
D LI D GK + L +L +LK G R ++F+Q T MLDILE + + + Y+RLDG T
Sbjct: 846 DMDLI-LDSGKFRVLGCILSELKQKGDRVVLFSQFTMMLDILEVLLKHHQHRYLRLDGKT 904
Query: 1047 QPEERQTLMQRFNTNPKIFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQDRCH 1106
Q ER L+ FNT+ IF+F+LST++GG+GINL A+ VI +D D NP D+QA+DRCH
Sbjct: 905 QISERIHLIDEFNTDMDIFVFLLSTKAGGLGINLTSANVVILHDIDCNPYNDKQAEDRCH 964
Query: 1107 RIGQTREVHIYRLISESTIEENILKKANQKRALD-DLV-IQSGGYNT 1151
R+GQT+EV + +LIS+ TIEE++LK QK L+ D+ + G T
Sbjct: 965 RVGQTKEVLVIKLISQGTIEESMLKINQQKLKLEQDMTTVDEGDEGT 1011
Score = 44 (20.5 bits), Expect = 5.1e-29, Sum P(3) = 5.1e-29
Identities = 19/79 (24%), Positives = 38/79 (48%)
Query: 212 VVEEGHVQGN-GN----DLL---AGSKLDTSGSLVRR-CDEINGGLSISENHLLDIETSQ 262
+ +EGH+ N G+ L+ A ++L +G+ V+ E+ L+ H+ TS+
Sbjct: 626 IFDEGHMLKNMGSIRYQHLMTINANNRLLLTGTPVQNNLLELMSLLNFVMPHMFSSSTSE 685
Query: 263 VRDTSKKSGASTQKQALYD 281
+R S +Q++Y+
Sbjct: 686 IRRMFSSKTKSADEQSIYE 704
Score = 38 (18.4 bits), Expect = 3.2e-88, Sum P(3) = 3.2e-88
Identities = 14/59 (23%), Positives = 24/59 (40%)
Query: 68 TERYSSMLAENLVDSHKPVQQSPMREQPGIQYKE--ADENGAEEPG----VQSKEADED 120
TE+ ++ + S + Q GIQY + +D P VQ K+ ++D
Sbjct: 56 TEKTEDSSVPETTENERKASISYFKNQRGIQYIDLSSDSEDIVSPNCSSTVQEKKFNKD 114
>UNIPROTKB|J9PA79 [details] [associations]
symbol:SMARCAD1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR003892 InterPro:IPR009060 Pfam:PF00176 Pfam:PF00271
PROSITE:PS51140 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003677 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 SUPFAM:SSF46934 GeneTree:ENSGT00630000089890
OMA:KNQRGIQ EMBL:AAEX03016768 EMBL:AAEX03016769
Ensembl:ENSCAFT00000043847 Uniprot:J9PA79
Length = 1026
Score = 597 (215.2 bits), Expect = 3.2e-88, Sum P(3) = 3.2e-88
Identities = 128/292 (43%), Positives = 178/292 (60%)
Query: 455 LREYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTIAMLAHLACEKGIWGPHLIVVPTS 514
L+ YQ +GL+WL +++ LNGILADEMGLGKTI IA LA+L ++G GPHLIVVP S
Sbjct: 497 LKPYQKVGLNWLALVHKHGLNGILADEMGLGKTIQAIAFLAYLY-QEGNKGPHLIVVPAS 555
Query: 515 VMLNWETEFLKWCPAFKILTYFGSAKERKFKRQG-WLKPNSFHVCITTYRLIIQ---DSK 570
+ NW E WCP K+L Y+GS +ERK R K ++V +TTY I D
Sbjct: 556 TIDNWLREVNLWCPTLKVLCYYGSQEERKQIRYNIHSKYEEYNVIVTTYNCAISSSDDRS 615
Query: 571 VFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPLQNDLMELWSLMHFLM 630
+F+R K Y I DE H++KN S R+Q L+ N+ R+LLTGTP+QN+L+EL SL++F+M
Sbjct: 616 LFRRLKLNYAIFDEGHMLKNMGSIRYQHLMTINANNRLLLTGTPVQNNLLELMSLLNFVM 675
Query: 631 PHIFQSH-QEFKDWFCNPISGMVEGQEKVNKEVVDRLHNVLRPFILRRLKRDVEKQLPMK 689
PH+F S E + F + E Q KE + +++PFILRR+K +V KQLP K
Sbjct: 676 PHMFSSSTSEIRRMFSSKTKSADE-QSIYEKERIAHAKQIIKPFILRRVKEEVLKQLPPK 734
Query: 690 QEHVIYCRLSKRQRNLYEDFIASSETQATLASANFFGMISVIMQLRKVCNHP 741
++ + C +S++Q LY + + M +V+MQLRK+ NHP
Sbjct: 735 KDQIELCAMSEKQEQLYLGLFNRLKKSINNIEKST-EMCNVMMQLRKMANHP 785
Score = 386 (140.9 bits), Expect = 3.2e-88, Sum P(3) = 3.2e-88
Identities = 81/167 (48%), Positives = 112/167 (67%)
Query: 987 DRRLIQFDCGKLQELAILLRKLKSDGHRALIFTQMTKMLDILEEFISLYGYTYMRLDGST 1046
D LI D GK + L +L +LK G R ++F+Q T MLDILE + + + Y+RLDG T
Sbjct: 846 DMDLI-LDSGKFRVLGCILSELKQKGDRVVLFSQFTMMLDILEVLLKHHQHRYLRLDGKT 904
Query: 1047 QPEERQTLMQRFNTNPKIFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQDRCH 1106
Q ER L+ FNT+ IF+F+LST++GG+GINL A+ VI +D D NP D+QA+DRCH
Sbjct: 905 QISERIHLIDEFNTDMDIFVFLLSTKAGGLGINLTSANVVILHDIDCNPYNDKQAEDRCH 964
Query: 1107 RIGQTREVHIYRLISESTIEENILKKANQKRALD-DLV-IQSGGYNT 1151
R+GQT+EV + +LIS+ TIEE++LK QK L+ D+ + G T
Sbjct: 965 RVGQTKEVLVIKLISQGTIEESMLKINQQKLKLEQDMTTVDEGDEGT 1011
Score = 44 (20.5 bits), Expect = 5.1e-29, Sum P(3) = 5.1e-29
Identities = 19/79 (24%), Positives = 38/79 (48%)
Query: 212 VVEEGHVQGN-GN----DLL---AGSKLDTSGSLVRR-CDEINGGLSISENHLLDIETSQ 262
+ +EGH+ N G+ L+ A ++L +G+ V+ E+ L+ H+ TS+
Sbjct: 626 IFDEGHMLKNMGSIRYQHLMTINANNRLLLTGTPVQNNLLELMSLLNFVMPHMFSSSTSE 685
Query: 263 VRDTSKKSGASTQKQALYD 281
+R S +Q++Y+
Sbjct: 686 IRRMFSSKTKSADEQSIYE 704
Score = 38 (18.4 bits), Expect = 3.2e-88, Sum P(3) = 3.2e-88
Identities = 14/59 (23%), Positives = 24/59 (40%)
Query: 68 TERYSSMLAENLVDSHKPVQQSPMREQPGIQYKE--ADENGAEEPG----VQSKEADED 120
TE+ ++ + S + Q GIQY + +D P VQ K+ ++D
Sbjct: 58 TEKTEDSSVPETTENERKASISYFKNQRGIQYIDLSSDSEDIVSPNCSSTVQEKKFNKD 116
>UNIPROTKB|Q9H4L7 [details] [associations]
symbol:SMARCAD1 "SWI/SNF-related matrix-associated
actin-dependent regulator of chromatin subfamily A containing
DEAD/H box 1" species:9606 "Homo sapiens" [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0009117 "nucleotide metabolic process" evidence=NAS]
[GO:0003676 "nucleic acid binding" evidence=NAS] [GO:0016363
"nuclear matrix" evidence=NAS] [GO:0051260 "protein
homooligomerization" evidence=NAS] [GO:0000018 "regulation of DNA
recombination" evidence=IEP] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=NAS] [GO:0016568 "chromatin
modification" evidence=NAS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0003677 "DNA binding" evidence=IDA] [GO:0000729
"DNA double-strand break processing" evidence=IMP] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=IMP] [GO:0035861
"site of double-strand break" evidence=IDA] [GO:0043596 "nuclear
replication fork" evidence=IDA] [GO:0006338 "chromatin remodeling"
evidence=NAS] [GO:0051304 "chromosome separation" evidence=IMP]
[GO:0070932 "histone H3 deacetylation" evidence=IMP] [GO:0070933
"histone H4 deacetylation" evidence=IMP] [GO:0000792
"heterochromatin" evidence=ISS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR000330
InterPro:IPR001650 InterPro:IPR003892 InterPro:IPR009060
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51140 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0045893 GO:GO:0003677
GO:GO:0009117 GO:GO:0051260 GO:GO:0043596 GO:GO:0004386
GO:GO:0016363 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0043044 SUPFAM:SSF46934 GO:GO:0000792
GO:GO:0070932 GO:GO:0070933 GO:GO:0000729 GO:GO:0000018
HOGENOM:HOG000172362 GO:GO:0035861 KO:K14439 GO:GO:0051304
OMA:KNQRGIQ EMBL:AY008271 EMBL:AB032948 EMBL:AK023990 EMBL:AK027490
EMBL:AK301668 EMBL:AC096746 EMBL:BC017953 EMBL:BC045534
EMBL:AL359929 EMBL:AL512768 IPI:IPI00008422 IPI:IPI00220119
RefSeq:NP_001121901.1 RefSeq:NP_001121902.1 RefSeq:NP_001241878.1
RefSeq:NP_064544.2 UniGene:Hs.410406 ProteinModelPortal:Q9H4L7
SMR:Q9H4L7 STRING:Q9H4L7 PhosphoSite:Q9H4L7 DMDM:306526240
PaxDb:Q9H4L7 PRIDE:Q9H4L7 DNASU:56916 Ensembl:ENST00000354268
Ensembl:ENST00000359052 Ensembl:ENST00000457823
Ensembl:ENST00000509418 GeneID:56916 KEGG:hsa:56916 UCSC:uc003htb.4
UCSC:uc003htc.4 CTD:56916 GeneCards:GC04P095128 H-InvDB:HIX0004380
HGNC:HGNC:18398 HPA:HPA016737 MIM:136000 MIM:612761
neXtProt:NX_Q9H4L7 Orphanet:289465 PharmGKB:PA134954731
HOVERGEN:HBG055804 ChiTaRS:SMARCAD1 GenomeRNAi:56916 NextBio:62407
ArrayExpress:Q9H4L7 Bgee:Q9H4L7 CleanEx:HS_SMARCAD1
Genevestigator:Q9H4L7 GermOnline:ENSG00000163104 Uniprot:Q9H4L7
Length = 1026
Score = 596 (214.9 bits), Expect = 4.2e-88, Sum P(3) = 4.2e-88
Identities = 128/292 (43%), Positives = 178/292 (60%)
Query: 455 LREYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTIAMLAHLACEKGIWGPHLIVVPTS 514
L+ YQ +GL+WL +++ LNGILADEMGLGKTI IA LA+L ++G GPHLIVVP S
Sbjct: 497 LKPYQKVGLNWLALVHKHGLNGILADEMGLGKTIQAIAFLAYLY-QEGNNGPHLIVVPAS 555
Query: 515 VMLNWETEFLKWCPAFKILTYFGSAKERKFKRQG-WLKPNSFHVCITTYRLIIQ---DSK 570
+ NW E WCP K+L Y+GS +ERK R + ++V +TTY I D
Sbjct: 556 TIDNWLREVNLWCPTLKVLCYYGSQEERKQIRFNIHSRYEDYNVIVTTYNCAISSSDDRS 615
Query: 571 VFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPLQNDLMELWSLMHFLM 630
+F+R K Y I DE H++KN S R+Q L+ N+ R+LLTGTP+QN+L+EL SL++F+M
Sbjct: 616 LFRRLKLNYAIFDEGHMLKNMGSIRYQHLMTINANNRLLLTGTPVQNNLLELMSLLNFVM 675
Query: 631 PHIFQSH-QEFKDWFCNPISGMVEGQEKVNKEVVDRLHNVLRPFILRRLKRDVEKQLPMK 689
PH+F S E + F + E Q KE + +++PFILRR+K +V KQLP K
Sbjct: 676 PHMFSSSTSEIRRMFSSKTKSADE-QSIYEKERIAHAKQIIKPFILRRVKEEVLKQLPPK 734
Query: 690 QEHVIYCRLSKRQRNLYEDFIASSETQATLASANFFGMISVIMQLRKVCNHP 741
++ + C +S++Q LY + N M +V+MQLRK+ NHP
Sbjct: 735 KDRIELCAMSEKQEQLYLGLFNRLKKSINNLEKNT-EMCNVMMQLRKMANHP 785
Score = 385 (140.6 bits), Expect = 4.2e-88, Sum P(3) = 4.2e-88
Identities = 78/154 (50%), Positives = 107/154 (69%)
Query: 987 DRRLIQFDCGKLQELAILLRKLKSDGHRALIFTQMTKMLDILEEFISLYGYTYMRLDGST 1046
D LI D GK + L +L +LK G R ++F+Q T MLDILE + + + Y+RLDG T
Sbjct: 846 DMDLI-LDSGKFRVLGCILSELKQKGDRVVLFSQFTMMLDILEVLLKHHQHRYLRLDGKT 904
Query: 1047 QPEERQTLMQRFNTNPKIFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQDRCH 1106
Q ER L+ FNT+ IF+F+LST++GG+GINL A+ VI +D D NP D+QA+DRCH
Sbjct: 905 QISERIHLIDEFNTDMDIFVFLLSTKAGGLGINLTSANVVILHDIDCNPYNDKQAEDRCH 964
Query: 1107 RIGQTREVHIYRLISESTIEENILKKANQKRALD 1140
R+GQT+EV + +LIS+ TIEE++LK QK L+
Sbjct: 965 RVGQTKEVLVIKLISQGTIEESMLKINQQKLKLE 998
Score = 44 (20.5 bits), Expect = 5.2e-29, Sum P(3) = 5.2e-29
Identities = 19/79 (24%), Positives = 38/79 (48%)
Query: 212 VVEEGHVQGN-GN----DLL---AGSKLDTSGSLVRR-CDEINGGLSISENHLLDIETSQ 262
+ +EGH+ N G+ L+ A ++L +G+ V+ E+ L+ H+ TS+
Sbjct: 626 IFDEGHMLKNMGSIRYQHLMTINANNRLLLTGTPVQNNLLELMSLLNFVMPHMFSSSTSE 685
Query: 263 VRDTSKKSGASTQKQALYD 281
+R S +Q++Y+
Sbjct: 686 IRRMFSSKTKSADEQSIYE 704
Score = 39 (18.8 bits), Expect = 4.2e-88, Sum P(3) = 4.2e-88
Identities = 15/59 (25%), Positives = 23/59 (38%)
Query: 68 TERYSSMLAENLVDSHKPVQQSPMREQPGIQYKE--ADENGAEEPG----VQSKEADED 120
TE+ D+ + S + Q GIQY + +D P VQ K ++D
Sbjct: 60 TEKTEDSSVPETPDNERKASISYFKNQRGIQYIDLSSDSEDVVSPNCSNTVQEKTFNKD 118
>MGI|MGI:95453 [details] [associations]
symbol:Smarcad1 "SWI/SNF-related, matrix-associated
actin-dependent regulator of chromatin, subfamily a, containing
DEAD/H box 1" species:10090 "Mus musculus" [GO:0000018 "regulation
of DNA recombination" evidence=ISS] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000729 "DNA double-strand break
processing" evidence=ISO] [GO:0000792 "heterochromatin"
evidence=IDA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=ISO] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005694 "chromosome"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006974
"response to DNA damage stimulus" evidence=IEA] [GO:0016568
"chromatin modification" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0035861 "site of double-strand break"
evidence=ISO] [GO:0043044 "ATP-dependent chromatin remodeling"
evidence=ISO] [GO:0043596 "nuclear replication fork" evidence=ISO]
[GO:0051304 "chromosome separation" evidence=ISO] [GO:0070932
"histone H3 deacetylation" evidence=ISO] [GO:0070933 "histone H4
deacetylation" evidence=ISO] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR003892 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51140
PROSITE:PS51194 SMART:SM00490 MGI:MGI:95453 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0043596 GO:GO:0004386
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0043044 GO:GO:0000792 GO:GO:0070932 GO:GO:0070933
GO:GO:0000729 GO:GO:0000018 HOGENOM:HOG000172362 GO:GO:0035861
KO:K14439 GeneTree:ENSGT00630000089890 GO:GO:0051304 OMA:KNQRGIQ
CTD:56916 HOVERGEN:HBG055804 EMBL:X69942 EMBL:AK122454
EMBL:BC042442 EMBL:AK134442 EMBL:AK147884 IPI:IPI00223926
IPI:IPI00556837 PIR:A56559 RefSeq:NP_001240321.1 RefSeq:NP_031984.1
UniGene:Mm.99113 ProteinModelPortal:Q04692 SMR:Q04692 STRING:Q04692
PhosphoSite:Q04692 PaxDb:Q04692 PRIDE:Q04692
Ensembl:ENSMUST00000031984 GeneID:13990 KEGG:mmu:13990
UCSC:uc009ced.1 UCSC:uc012emw.1 InParanoid:Q04692 OrthoDB:EOG4RV2QW
NextBio:284868 Bgee:Q04692 Genevestigator:Q04692
GermOnline:ENSMUSG00000029920 Uniprot:Q04692
Length = 1021
Score = 592 (213.5 bits), Expect = 1.1e-87, Sum P(3) = 1.1e-87
Identities = 130/301 (43%), Positives = 181/301 (60%)
Query: 448 PFLLK--FPLREYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTIAMLAHLACEKGIWG 505
P LL L+ YQ +GL+WL +++ LNGILADEMGLGKTI IA LA+L ++G G
Sbjct: 483 PSLLNQSLSLKPYQKVGLNWLALVHKHGLNGILADEMGLGKTIQAIAFLAYLF-QEGNKG 541
Query: 506 PHLIVVPTSVMLNWETEFLKWCPAFKILTYFGSAKERKFKRQG-WLKPNSFHVCITTYRL 564
PHLIVVP S + NW E WCP+ +L Y+GS +ERK R K ++V +TTY
Sbjct: 542 PHLIVVPASTIDNWLREVNLWCPSLNVLCYYGSQEERKQIRFNIHNKYEDYNVIVTTYNC 601
Query: 565 IIQ---DSKVFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPLQNDLME 621
I D +F+R K Y I DE H++KN S R+Q L+ N++ R+LLTGTP+QN+L+E
Sbjct: 602 AISSSDDRSLFRRLKLNYAIFDEGHMLKNMGSIRYQHLMTINARNRLLLTGTPVQNNLLE 661
Query: 622 LWSLMHFLMPHIFQSH-QEFKDWFCNPISGMVEGQEKVNKEVVDRLHNVLRPFILRRLKR 680
L SL++F+MPH+F S E + F + E Q KE + +++PFILRR+K
Sbjct: 662 LMSLLNFVMPHMFSSSTSEIRRMFSSKTKPADE-QSIYEKERIAHAKQIIKPFILRRVKE 720
Query: 681 DVEKQLPMKQEHVIYCRLSKRQRNLYEDFIASSETQATLASANFFGMISVIMQLRKVCNH 740
+V K LP K++ + C +S++Q LY + N M +V+MQLRK+ NH
Sbjct: 721 EVLKLLPPKKDRIELCAMSEKQEQLYSGLFNRLKKSINNLEKNT-EMCNVMMQLRKMANH 779
Query: 741 P 741
P
Sbjct: 780 P 780
Score = 387 (141.3 bits), Expect = 1.1e-87, Sum P(3) = 1.1e-87
Identities = 79/157 (50%), Positives = 108/157 (68%)
Query: 984 YFPDRRLIQFDCGKLQELAILLRKLKSDGHRALIFTQMTKMLDILEEFISLYGYTYMRLD 1043
Y D LI D GK + L +L +LK G R ++F+Q T MLDILE + + + Y+RLD
Sbjct: 838 YQLDMDLI-LDSGKFRALGCILSELKQKGDRVVLFSQFTMMLDILEVLLKHHQHRYLRLD 896
Query: 1044 GSTQPEERQTLMQRFNTNPKIFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQD 1103
G TQ ER L+ FNT+ IF+F+LST++GG+GINL A+ VI +D D NP D+QA+D
Sbjct: 897 GKTQISERIHLIDEFNTDMDIFVFLLSTKAGGLGINLTSANVVILHDIDCNPYNDKQAED 956
Query: 1104 RCHRIGQTREVHIYRLISESTIEENILKKANQKRALD 1140
RCHR+GQT+EV + +LIS+ TIEE++LK QK L+
Sbjct: 957 RCHRVGQTKEVLVIKLISQGTIEESMLKINQQKLKLE 993
Score = 37 (18.1 bits), Expect = 1.1e-87, Sum P(3) = 1.1e-87
Identities = 10/36 (27%), Positives = 16/36 (44%)
Query: 90 PMREQPGIQYK-EADENGAEEPGVQSKEADEDDAEQ 124
P + +P A+E AE G ++ D D E+
Sbjct: 27 PSQARPSSPISLSAEEENAEGEGSRANTPDSDVTEK 62
Score = 37 (18.1 bits), Expect = 2.6e-28, Sum P(3) = 2.6e-28
Identities = 18/79 (22%), Positives = 37/79 (46%)
Query: 212 VVEEGHVQGN-GN----DLL---AGSKLDTSGSLVRR-CDEINGGLSISENHLLDIETSQ 262
+ +EGH+ N G+ L+ A ++L +G+ V+ E+ L+ H+ TS+
Sbjct: 621 IFDEGHMLKNMGSIRYQHLMTINARNRLLLTGTPVQNNLLELMSLLNFVMPHMFSSSTSE 680
Query: 263 VRDTSKKSGASTQKQALYD 281
+R +Q++Y+
Sbjct: 681 IRRMFSSKTKPADEQSIYE 699
>RGD|1304733 [details] [associations]
symbol:Ep400 "E1A binding protein p400" species:10116 "Rattus
norvegicus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0016607 "nuclear speck" evidence=ISO] [GO:0035267
"NuA4 histone acetyltransferase complex" evidence=ISO] [GO:0043967
"histone H4 acetylation" evidence=ISO] [GO:0043968 "histone H2A
acetylation" evidence=ISO] InterPro:IPR000330 InterPro:IPR001005
Pfam:PF00176 SMART:SM00717 RGD:1304733 GO:GO:0005524 GO:GO:0003677
GO:GO:0003682 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR017877 PROSITE:PS50090 InterPro:IPR013999
InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529 SMART:SM00573
PROSITE:PS51204 EMBL:AC095390 IPI:IPI00948258
Ensembl:ENSRNOT00000066812 ArrayExpress:D3ZXH2 Uniprot:D3ZXH2
Length = 2908
Score = 790 (283.2 bits), Expect = 4.0e-87, Sum P(8) = 4.0e-87
Identities = 150/321 (46%), Positives = 201/321 (62%)
Query: 433 PTGITFSTTQVRTKFPFLLKFPLREYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTIA 492
P G TT V+ P LL LR+YQ IGLDWL +Y K LNGILADE GLGKT+ IA
Sbjct: 1068 PKGSARVTTAVKFSAPSLLYGALRDYQKIGLDWLAKLYRKNLNGILADEAGLGKTVQIIA 1127
Query: 493 MLAHLACEKGIWGPHLIVVPTSVMLNWETEFLKWCPAFKILTYFGSAKERKFKRQGWLKP 552
AHLAC +G WGPHL+V+ + +L WE E +WCP K L+Y G+ +E K KRQ W +P
Sbjct: 1128 FFAHLACNEGNWGPHLVVMRSCNILKWELELKRWCPGLKTLSYVGTHRELKAKRQEWTEP 1187
Query: 553 NSFHVCITTYRLIIQDSKVFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTG 612
N+FH+CIT+Y+ + F R WK L++DE +K + W+ + S++R+LL
Sbjct: 1188 NNFHICITSYKQFFRGYTAFSRVHWKCLVVDEMQRVKGMTERHWEAIFKLQSQQRLLLID 1247
Query: 613 TPLQNDLMELWSLMHFLMPHIFQSHQEFKDWFCNPISGMVEGQEKVNKEVVDRLHNVLRP 672
PL N +ELW+++HFL+P I + + F P+ E + ++V RLH V +P
Sbjct: 1248 VPLHNTFLELWTMVHFLIPGISRPYLSF------PLKAPNEENQDYYHKMVIRLHRVTQP 1301
Query: 673 FILRRLKRDVEKQLPMKQEHVIYCRLSKRQRNLYEDFIASSETQATLASANFFGMISVIM 732
FILRR KRDVEKQL K EHV+ CRLS RQ+ LYED I TQ L S +F ++SV+
Sbjct: 1302 FILRRTKRDVEKQLTRKYEHVLKCRLSSRQKALYEDVILQPRTQEALKSGHFVSVLSVLT 1361
Query: 733 QLRKVCNHPDLFEGRPIVSSF 753
+L+++CNHP L E R SS+
Sbjct: 1362 RLQRICNHPGLVEPRVPGSSY 1382
Score = 123 (48.4 bits), Expect = 4.0e-87, Sum P(8) = 4.0e-87
Identities = 40/160 (25%), Positives = 76/160 (47%)
Query: 1102 QDRCHRIGQTREVHIYRLISESTIEENILKKANQKRALDDLVIQSGGYNTEFFKKLDPME 1161
++ C RIG+ +++HIYRL+S ++IEE +LK K + ++ Q Y+ F + E
Sbjct: 1766 EEWCDRIGRCKDIHIYRLVSGNSIEEKLLKNGT-KDLIREVAAQGNDYSMAFLTQRTIQE 1824
Query: 1162 LFSGHRTL-----PMKT-----MQKEKAINNGNEVSLSNADVEA--ALKCVEDEADYMAL 1209
LF + + P+K + +E +++ ++ +EA +++C+E++A
Sbjct: 1825 LFEVYSPMDDAGFPVKAEEFVVLSQEPSVSETIAPKIARPFIEALKSIECLEEDA----- 1879
Query: 1210 KRAEQEEAVDNQEFTEEAVGRPEDDELVIEDTVRTDEPTD 1249
+ EEAV AV D E+ + +E D
Sbjct: 1880 -QRSTEEAVPGSSTV--AVSSDSDGSRYDEEPSQLEELAD 1916
Score = 90 (36.7 bits), Expect = 4.0e-87, Sum P(8) = 4.0e-87
Identities = 25/105 (23%), Positives = 51/105 (48%)
Query: 22 VAVNISKDVKKFWMKIEKLVLYKHQMEVDVRKKKALDKQLEFLLGQTERYSSMLAENLVD 81
+A +++++ FW IE++V K Q+E++ ++KKAL+ Q G+ R + +
Sbjct: 868 IAATTAREIEYFWSNIEQVVEIKLQVELEEKRKKALNLQKVSRRGKESRLKGF--DTSPE 925
Query: 82 SHKPVQQSPMREQPGIQYKEADENGAEEPGVQSKEADEDDAEQHS 126
+ S + + + DE EE ++ +EA E + H+
Sbjct: 926 HSMDLGISGRKRKASTSLTD-DEVEDEEETIEEEEAHEGLVDHHT 969
Score = 69 (29.3 bits), Expect = 4.0e-87, Sum P(8) = 4.0e-87
Identities = 22/100 (22%), Positives = 44/100 (44%)
Query: 856 QDRASSVAWWNSLRCQKKPVYSTSLRELLTV----KHPVCDILQQKTVR--RSYLYSSKL 909
++R + + N RC + PVY L + ++ K P+C L + + Y + L
Sbjct: 1665 KERLDQIHFINERRCSQAPVYGRDLLRICSLPGRRKRPLCWSLDSNLGKGPKGADYDTSL 1724
Query: 910 A----DIVLSPVERFQRMIGLVESFMFAIPAARAPAPVCW 945
+ D++L+ +R + + +++ IP A P W
Sbjct: 1725 SKSEGDLILTLSQRQESLQDVLDRVACVIPPVVATPPSLW 1764
Score = 68 (29.0 bits), Expect = 4.0e-87, Sum P(8) = 4.0e-87
Identities = 15/48 (31%), Positives = 26/48 (54%)
Query: 1302 EAISSFENQLRPIDRYAIRFLELWDPIIDKTAVESE---VKFEEREWE 1346
E ++ F QL PI++YA+ +LEL+ ++ S V ++WE
Sbjct: 1912 EELADFMEQLTPIEKYALNYLELFHTTTEQEKERSSEDLVMATMKDWE 1959
Score = 50 (22.7 bits), Expect = 4.0e-87, Sum P(8) = 4.0e-87
Identities = 14/46 (30%), Positives = 20/46 (43%)
Query: 1601 LCAVVHEYGPNWSLVSDILYGMTASGYYRGRYRHPVHCCERFRELI 1646
L V + PNW LVSD++ + YR C R+ +I
Sbjct: 2152 LTIVSPAHTPNWDLVSDVVNSCSRI------YRSSKQCRNRYENVI 2191
Score = 43 (20.2 bits), Expect = 4.0e-87, Sum P(8) = 4.0e-87
Identities = 8/20 (40%), Positives = 15/20 (75%)
Query: 322 EIALLQKESEIPVEELLARY 341
E++ L KE+E+P+ +L+ Y
Sbjct: 970 ELSNLAKEAELPLIDLMKLY 989
Score = 40 (19.1 bits), Expect = 5.5e-82, Sum P(8) = 5.5e-82
Identities = 14/48 (29%), Positives = 22/48 (45%)
Query: 182 PLQELLKRYAVDKVGRESSAEMGEDEAEPTVVEEGHVQGNGNDLLAGS 229
PLQ L++ +D + E E E+E + +E V G D G+
Sbjct: 413 PLQAYLRQNDLD-IEEEEEEEEEEEEKSEVINDEVKVV-TGKDGQTGT 458
Score = 38 (18.4 bits), Expect = 4.0e-87, Sum P(8) = 4.0e-87
Identities = 14/71 (19%), Positives = 26/71 (36%)
Query: 1853 ARACIEDSLGWASSAFPANDAKLRSVPKSQSLGKHKLSLSDSVKCPKSKLRKTSMEHSEI 1912
A E + + P A LR+ + + K K +L+D K + + + +
Sbjct: 2257 ASVLAESGINYDKPLPPIQVASLRA----ERIAKEKKALADQQKAQQPPVTQPPPQQQPQ 2312
Query: 1913 QHSSPEPVSNQ 1923
Q P+ Q
Sbjct: 2313 QQQPPQQQQQQ 2323
Score = 37 (18.1 bits), Expect = 8.7e-86, Sum P(8) = 8.7e-86
Identities = 14/50 (28%), Positives = 22/50 (44%)
Query: 1717 RQNFSSSRNGLYLGGSFFSSVTQTSCKSTREPARRVKFTNLGQSSKLLSA 1766
R+ +N L + F+ T KS+ EPA+ +G+ LL A
Sbjct: 2092 REGKEQKKNLLLKQQTPFAKPLPTYVKSSGEPAQDSPDWLIGEDWALLQA 2141
Score = 37 (18.1 bits), Expect = 1.1e-81, Sum P(8) = 1.1e-81
Identities = 8/14 (57%), Positives = 9/14 (64%)
Query: 217 HVQGNGNDLLAGSK 230
H+QGN D LA K
Sbjct: 395 HLQGNMMDFLAFKK 408
>TAIR|locus:2051678 [details] [associations]
symbol:ETL1 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA;ISS] [GO:0004386 "helicase activity"
evidence=IEA;ISS] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM] InterPro:IPR000330
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0003677 GO:GO:0004386 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:AC005936 HOGENOM:HOG000172362
KO:K14439 EMBL:AY059857 EMBL:BT002576 IPI:IPI00520453 PIR:H84432
RefSeq:NP_178318.1 UniGene:At.13358 ProteinModelPortal:Q9ZUL5
SMR:Q9ZUL5 IntAct:Q9ZUL5 PaxDb:Q9ZUL5 PRIDE:Q9ZUL5
EnsemblPlants:AT2G02090.1 GeneID:814740 KEGG:ath:AT2G02090
TAIR:At2g02090 InParanoid:Q9ZUL5 OMA:CAKISAD PhylomeDB:Q9ZUL5
ProtClustDB:CLSN2683669 ArrayExpress:Q9ZUL5 Genevestigator:Q9ZUL5
Uniprot:Q9ZUL5
Length = 763
Score = 505 (182.8 bits), Expect = 7.3e-87, Sum P(3) = 7.3e-87
Identities = 115/304 (37%), Positives = 180/304 (59%)
Query: 455 LREYQHIGLDWLVTMYEKRLNG-ILADEMGLGKTIMTIAMLAHLACEKGIWGPHLIVVPT 513
L+ YQ +G+++L+ +Y+K + G ILADEMGLGKTI I L L+ GPHL+V P
Sbjct: 213 LKPYQLVGVNFLLLLYKKGIEGAILADEMGLGKTIQAITYLTLLSRLNNDPGPHLVVCPA 272
Query: 514 SVMLNWETEFLKWCPAFKILTYFGSAKERKFKRQGWL----KPNSFHVCITTYRLIIQ-- 567
SV+ NWE E KWCP+F +L Y G+A+ + L KP F+V + Y L +
Sbjct: 273 SVLENWERELRKWCPSFTVLQYHGAARAAYSRELNSLSKAGKPPPFNVLLVCYSLFERHS 332
Query: 568 -----DSKVFKRKKWKYLILDEAHLIKNWKSQRWQTLLNF--NSKRRILLTGTPLQNDLM 620
D KV KR +W +++DEAH +K+ S RW+ L++ N+ +R++LTGTPLQNDL
Sbjct: 333 EQQKDDRKVLKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGTPLQNDLH 392
Query: 621 ELWSLMHFLMPHIFQSHQEFKDWFCNPISGMVEGQEKVNKEVVDRLHNVLRPFILRRLKR 680
ELWSL+ F++P IF + E D + ++ ++ E++ R+ ++L PFILRRLK
Sbjct: 393 ELWSLLEFMLPDIFTT--ENVD-----LKKLLNAEDT---ELITRMKSILGPFILRRLKS 442
Query: 681 DVEKQLPMKQEHVIYCRLSKRQRNLY----EDFIASSETQATLASANFFGMISVIMQLRK 736
DV +QL K + V Y + ++Q + Y E++ A+S+ + S+ ++ + R+
Sbjct: 443 DVMQQLVPKIQRVEYVLMERKQEDAYKEAIEEYRAASQARLVKLSSKSLNSLAKALPKRQ 502
Query: 737 VCNH 740
+ N+
Sbjct: 503 ISNY 506
Score = 435 (158.2 bits), Expect = 7.3e-87, Sum P(3) = 7.3e-87
Identities = 84/151 (55%), Positives = 112/151 (74%)
Query: 997 KLQELAILLRKLKSDGHRALIFTQMTKMLDILEEFISLYGYTYMRLDGSTQPEERQTLMQ 1056
K + LA LL +K GHR LIF+Q T MLDILE + + G TY RLDGSTQ +RQT++
Sbjct: 589 KCRTLAELLPSMKKSGHRVLIFSQWTSMLDILEWTLDVIGVTYRRLDGSTQVTDRQTIVD 648
Query: 1057 RFNTNPKIFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQDRCHRIGQTREVHI 1116
FN + IF +LSTR+GG G+NL GADTVI +D D+NP +D+QA+DRCHRIGQT+ V I
Sbjct: 649 TFNNDKSIFACLLSTRAGGQGLNLTGADTVIIHDMDFNPQIDRQAEDRCHRIGQTKPVTI 708
Query: 1117 YRLISESTIEENILKKANQKRALDDLVIQSG 1147
+RL+++ST++ENI + A +K LD V++SG
Sbjct: 709 FRLVTKSTVDENIYEIAKRKLVLDAAVLESG 739
Score = 299 (110.3 bits), Expect = 4.0e-64, Sum P(3) = 4.0e-64
Identities = 79/228 (34%), Positives = 126/228 (55%)
Query: 551 KPNSFHVCITTYRLIIQ-------DSKVFKRKKWKYLILDEAHLIKNWKSQRWQTLLNF- 602
KP F+V + Y L + D KV KR +W +++DEAH +K+ S RW+ L++
Sbjct: 314 KPPPFNVLLVCYSLFERHSEQQKDDRKVLKRWRWSCVLMDEAHALKDKNSYRWKNLMSVA 373
Query: 603 -NSKRRILLTGTPLQNDLMELWSLMHFLMPHIFQSHQEFKDWFCNPISGMVEGQEKVNKE 661
N+ +R++LTGTPLQNDL ELWSL+ F++P IF + E D + ++ ++ E
Sbjct: 374 RNANQRLMLTGTPLQNDLHELWSLLEFMLPDIFTT--ENVD-----LKKLLNAEDT---E 423
Query: 662 VVDRLHNVLRPFILRRLKRDVEKQLPMKQEHVIYCRLSKRQRNLY----EDFIASSETQA 717
++ R+ ++L PFILRRLK DV +QL K + V Y + ++Q + Y E++ A+S+ +
Sbjct: 424 LITRMKSILGPFILRRLKSDVMQQLVPKIQRVEYVLMERKQEDAYKEAIEEYRAASQARL 483
Query: 718 TLASANFFGMISVIM----------QLRKVCNHPDLFEGRPIVSSFDM 755
S+ ++ + Q RK+ NHP L R I S D+
Sbjct: 484 VKLSSKSLNSLAKALPKRQISNYFTQFRKIANHPLLI--RRIYSDEDV 529
Score = 57 (25.1 bits), Expect = 7.3e-87, Sum P(3) = 7.3e-87
Identities = 28/108 (25%), Positives = 47/108 (43%)
Query: 188 KRYAVDKVGRESSAEMGEDEAEPTVVE-EGHVQGNGNDLLAGSKLDTSGSLVRRCDEING 246
+R+ ++ E +++ +DEAE + E E G G+ G D G +++C +I+
Sbjct: 109 RRFVIED---EEASDDDDDEAESSASEDEFGGGGGGSGGRRGEDEDVVGKALQKCAKISA 165
Query: 247 GLSISENHLLDIETSQVRDTSKKSGASTQKQALY-DFSD--EQEDGDF 291
L L +S V D + ST + D D + ED DF
Sbjct: 166 DL---RKELYGT-SSGVTDRYSEVETSTVRIVTQNDIDDACKAEDSDF 209
>DICTYBASE|DDB_G0284171 [details] [associations]
symbol:DDB_G0284171 "CHR group protein" species:44689
"Dictyostelium discoideum" [GO:0005634 "nucleus" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0004003 "ATP-dependent DNA helicase activity"
evidence=ISS] InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013
PROSITE:PS51194 SMART:SM00298 SMART:SM00490 dictyBase:DDB_G0284171
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0003677
GO:GO:0006357 EMBL:AAFI02000063 GO:GO:0004003 InterPro:IPR016197
SUPFAM:SSF54160 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR023780 InterPro:IPR025260 Pfam:PF13907
KO:K11367 RefSeq:XP_638708.1 ProteinModelPortal:Q54Q16
STRING:Q54Q16 EnsemblProtists:DDB0220640 GeneID:8624452
KEGG:ddi:DDB_G0284171 InParanoid:Q54Q16 OMA:DINATEF
ProtClustDB:CLSZ2732060 Uniprot:Q54Q16
Length = 1917
Score = 575 (207.5 bits), Expect = 9.0e-87, Sum P(4) = 9.0e-87
Identities = 124/314 (39%), Positives = 191/314 (60%)
Query: 441 TQVRTKFPFLLKFPLREYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTIAMLAHLACE 500
T++ T+ ++ LR+YQ GL+WLV + N ILADEMGLGKTI TI+ L++L E
Sbjct: 741 TKLDTQPSWISAGTLRDYQMEGLNWLVHSWMNNTNVILADEMGLGKTIQTISFLSYLFNE 800
Query: 501 KGIWGPHLIVVPTSVMLNWETEFLKWCPAFKILTYFGSAKER------KF---KRQGWLK 551
+ I GP L+VVP S + NW+ EF KW PA ++ Y G+ + R +F R G K
Sbjct: 801 QDIKGPFLVVVPLSTIENWQREFAKWAPAMNVIVYTGTGQSRDIIRLYEFYTTNRLGKKK 860
Query: 552 PNSFHVCITTYRLIIQDSKVFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLT 611
N F+V +TTY I++D KW++L +DEAH +KN +S + L +N+ R+L+T
Sbjct: 861 LN-FNVLLTTYDFILKDKNTLGTIKWEFLAVDEAHRLKNSESVLHEVLKLYNTTNRLLVT 919
Query: 612 GTPLQNDLMELWSLMHFLMPHIFQSHQEFKDWFCNPISGMVEGQEKVNKEVVDRLHNVLR 671
GTPLQN L ELW+L++FLMP+ F S ++F+D + S + E + + +LH+VL+
Sbjct: 920 GTPLQNSLKELWNLLNFLMPNKFTSLKDFQDQY----SDLKENDQ------IAQLHSVLK 969
Query: 672 PFILRRLKRDVEKQLPMKQEHVIYCRLSKRQRNLYEDFIASSETQATLASANFFGMISVI 731
P +LRR+K+DVEK LP K E ++ LS Q+ Y+ + + + +++++
Sbjct: 970 PHLLRRIKKDVEKSLPPKTERILRVDLSNVQKKYYKWILTKNFQELNKGKGEKTTLLNIM 1029
Query: 732 MQLRKVCNHPDLFE 745
+L+K CNHP L++
Sbjct: 1030 TELKKTCNHPYLYQ 1043
Score = 411 (149.7 bits), Expect = 9.0e-87, Sum P(4) = 9.0e-87
Identities = 102/233 (43%), Positives = 137/233 (58%)
Query: 996 GKLQELAILLRKLKSDGHRALIFTQMTKMLDILEEFISLYGYTYMRLDGSTQPEERQTLM 1055
GKL L LL +LK GHR LIF+QM +MLDIL +++ + + RLDGS E+R M
Sbjct: 1065 GKLVLLDKLLIRLKETGHRVLIFSQMVRMLDILADYLKGRSFQFQRLDGSMSREKRSQAM 1124
Query: 1056 QRFNT--NPKIFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQDRCHRIGQTRE 1113
RFN +P F F+LST++GG+GINL ADTVI +DSDWNP D QA+ R HRIGQ
Sbjct: 1125 DRFNAVDSPD-FCFLLSTKAGGLGINLSTADTVIIFDSDWNPQNDLQAEARAHRIGQKNH 1183
Query: 1114 VHIYRLISESTIEENILKKANQKRALDDLVIQSGGYNTEFFKKLDPMELFSGHRTLPMKT 1173
V+IYRL+S+S++EE+IL++A QK LD LVIQ+ +K + + + +
Sbjct: 1184 VNIYRLVSKSSVEEDILERAKQKMVLDHLVIQT-------MEKSQTAKSNTPNNSNVFNK 1236
Query: 1174 MQKEKAINNGNEVSLSNADVEAALKCVEDEADYMALKRAEQEEAVDNQEFTEE 1226
+ E + G E L E A E + D + L RAE EA D+ EE
Sbjct: 1237 EELEAILKFGAE-ELFKETGEEANPIEEMDIDEI-LSRAETREASDSTTAGEE 1287
Score = 54 (24.1 bits), Expect = 9.0e-87, Sum P(4) = 9.0e-87
Identities = 12/31 (38%), Positives = 19/31 (61%)
Query: 1593 WLPQEDAILCAVVHEYG-PNW-SLVSDILYG 1621
W P+EDA+L ++++G NW S+ D G
Sbjct: 1484 WGPKEDAMLLMGIYKHGVSNWESIQKDTSLG 1514
Score = 52 (23.4 bits), Expect = 8.6e-48, Sum P(5) = 8.6e-48
Identities = 19/94 (20%), Positives = 40/94 (42%)
Query: 1193 VEAALKCVEDEADYMALKRAEQEEAVDNQEFT-EEAVGRPEDDELVIEDTVRTDEPTDQG 1251
V++ LK +D + K ++Q + + EF + GR + + + ++ T +
Sbjct: 1549 VDSLLKSAKDISKTTNKKSSKQTKEKEEGEFKIPKKRGRKSKEIKEVSNNNHNNKETKEN 1608
Query: 1252 GCMTANNDNGMMLTGNDPKEERALTFAAKEDDVD 1285
NN+N + N+ K ++ +DD D
Sbjct: 1609 NNGDNNNNNNNNNSSNNRKRTTNNKYSDDDDDDD 1642
Score = 46 (21.3 bits), Expect = 1.1e-86, Sum P(5) = 1.1e-86
Identities = 18/90 (20%), Positives = 38/90 (42%)
Query: 46 QMEVDVRKKKA-LDKQLEFLLGQTERYSSMLAENLVDSH----KPVQQSPMREQPGIQYK 100
+ E DV ++++ D ++ ++E S E+ D K + R+Q
Sbjct: 284 ESEEDVEEEQSGKDNDSDYEPSESEEQSEEDYESDTDDDDVYTKKKRGGGGRKQTASTTT 343
Query: 101 EADENGAEEPGVQSKEADEDDAEQHSGFEP 130
+G + + E+D +++E S +EP
Sbjct: 344 TTTRSGRQAKRITYSESDSEESESDSDYEP 373
Score = 45 (20.9 bits), Expect = 1.0e-48, Sum P(5) = 1.0e-48
Identities = 15/49 (30%), Positives = 23/49 (46%)
Query: 1161 ELFSGHRTLPMKTMQKEKAINNGNEVSLSNADVEAALKCVEDEADYMAL 1209
EL + R T KE+ N E + +AD + K V++E D + L
Sbjct: 1287 ELLNSFRVANFSTTSKEEQQNATWEDIIPDADRQ---KAVQEEKDQLLL 1332
Score = 42 (19.8 bits), Expect = 1.1e-86, Sum P(5) = 1.1e-86
Identities = 19/83 (22%), Positives = 34/83 (40%)
Query: 205 EDEAEPTVVEEG-HVQGNGN-DLLAGSKLDTSGSLVRRCDEINGGLSISENHLLDIETSQ 262
E + E T+ +G+GN D + D G D GG + TS+
Sbjct: 459 ESDEESTITHLNLRTRGSGNIDFSIFNSDDEEGE-----DGSGGGGGSGSG----LSTSE 509
Query: 263 VRDTSKKSGASTQKQALYDFSDE 285
++S + ++ K +Y+ +DE
Sbjct: 510 TTNSSTAAATASSKPLIYEPADE 532
Score = 40 (19.1 bits), Expect = 9.0e-87, Sum P(4) = 9.0e-87
Identities = 11/36 (30%), Positives = 18/36 (50%)
Query: 259 ETSQVRDTSKKSGASTQKQALYDFSDEQE---DGDF 291
+T+ T+ +SG K+ Y SD +E D D+
Sbjct: 337 QTASTTTTTTRSGRQA-KRITYSESDSEESESDSDY 371
Score = 38 (18.4 bits), Expect = 5.2e-85, Sum P(5) = 5.2e-85
Identities = 15/81 (18%), Positives = 25/81 (30%)
Query: 1453 SVEPMSIDDDFYDEDATFSDAMSPPSTSQKKRKKAELALYDDEEREXXXXXXXXXXXXXX 1512
SV P + + + T + + S+ + K DD+ R+
Sbjct: 1693 SVPPNKMGERSPSKSTTTTTTTTTSSSKSSRNSKHHSDDDDDDYRDKDSNSGRGRGRGRS 1752
Query: 1513 PVRSPDSDSKLSRKRHDGSTE 1533
S S S K H+ E
Sbjct: 1753 SNSSSSSSSSSRNKNHESDEE 1773
Score = 37 (18.1 bits), Expect = 1.8e-86, Sum P(4) = 1.8e-86
Identities = 18/66 (27%), Positives = 27/66 (40%)
Query: 221 NGNDLLAGSKLDTSGSLVRRCDEINGGLSISENHLLDIETSQVRDTSKKSGASTQKQALY 280
N N+ G K D S + +E + S SE+ + E+ DT K Q L
Sbjct: 202 NINNNNNGLKKDISNF---KGNESSSSESSSESSSSEEESESQEDTPNKQRNKVLTQQLA 258
Query: 281 DFSDEQ 286
S+E+
Sbjct: 259 SESEEE 264
>GENEDB_PFALCIPARUM|PFB0730w [details] [associations]
symbol:PFB0730w "DNA helicase, putative"
species:5833 "Plasmodium falciparum" [GO:0003678 "DNA helicase
activity" evidence=ISS] [GO:0006338 "chromatin remodeling"
evidence=ISS] [GO:0016514 "SWI/SNF complex" evidence=ISS]
InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003677
GO:GO:0006338 GO:GO:0016514 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0003678 KO:K11647 EMBL:AE001362 OMA:NENMNMS
PIR:F71607 RefSeq:XP_001349665.1 ProteinModelPortal:O96239
EnsemblProtists:PFB0730w:mRNA GeneID:812747 KEGG:pfa:PFB0730w
EuPathDB:PlasmoDB:PF3D7_0216000 Uniprot:O96239
Length = 1997
Score = 630 (226.8 bits), Expect = 2.2e-86, Sum P(6) = 2.2e-86
Identities = 133/308 (43%), Positives = 194/308 (62%)
Query: 444 RTKFP-FLLKFPLREYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTIAMLAHLA-CEK 501
+ K P L+ L +YQ GL+WLV++Y L+GILADEMGLGKTI TI++ A+L +
Sbjct: 872 KVKQPSILIGGELMKYQLEGLEWLVSLYNNNLHGILADEMGLGKTIQTISLFAYLKEFKN 931
Query: 502 GIWGPHLIVVPTSVMLNWETEFLKWCPAFKILTYFGSAKERKFKRQGWLKPNSFHVCITT 561
I +LI+VP S + NW +EF +WCP+ ++TY G+ ERK + L+ +F +CITT
Sbjct: 932 NINVKNLIIVPLSTLPNWISEFNRWCPSLNVITYRGNKLERKHIAKKLLE-QTFDICITT 990
Query: 562 YRLIIQDSKVFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPLQNDLME 621
+ L+I++ + W Y+++DE H +KN KS+ L F SK RILLTGTPLQN+L E
Sbjct: 991 FDLVIKEKSFLMKISWNYIVVDEGHRMKNNKSRFHVFLSEFKSKYRILLTGTPLQNNLSE 1050
Query: 622 LWSLMHFLMPHIFQSHQEFKDWFCNPISGMVEGQEKVNKE----VVDRLHNVLRPFILRR 677
LWSL++FL+P IF S +F+ WF + + E + +E +++RLH+VL PF+LRR
Sbjct: 1051 LWSLLNFLLPKIFSSCVDFEKWFVKSLHNEKDVYEHITEEEQLLIINRLHSVLLPFMLRR 1110
Query: 678 LKRDVEKQLPMKQEHVIYCRLSKRQRNLYEDFIASSETQATLASANFFGMI-SVIMQLRK 736
+K+DV K LP K E+ I+ LS Q+ LY+ Q + + +++MQLRK
Sbjct: 1111 VKKDVLKSLPKKYEYNIHIELSLYQKILYKQIQTKGFKQVNHNGSITTKIFQNIVMQLRK 1170
Query: 737 VCNHPDLF 744
+ NHP LF
Sbjct: 1171 IVNHPYLF 1178
Score = 252 (93.8 bits), Expect = 2.2e-86, Sum P(6) = 2.2e-86
Identities = 66/198 (33%), Positives = 105/198 (53%)
Query: 1061 NPKIFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQDRCHRIGQTREVHIYRLI 1120
N +FILSTRSG +G+NL ADTVI +DSD+NP D QA RCHRIGQ V ++R I
Sbjct: 1400 NQDAMIFILSTRSGSLGLNLQTADTVIIFDSDFNPHQDIQAMCRCHRIGQKNVVKVFRFI 1459
Query: 1121 SESTIEENILKKANQKRALDDLVIQSGGYNTEFFKKLDPM----ELFSGHRTLPMKTMQK 1176
+ S +EE + KKA K +++D VIQ+G +N + + D ++ ++ M T
Sbjct: 1460 TLSGVEELVFKKAQHKLSINDKVIQAGLFN-KIYNDEDRQNKLKDIIQRNQKNDMTTHPT 1518
Query: 1177 EKAINNGNEVSLSNADVEAAL---KCVEDEADYMALKRAEQEEAVDNQEFTEEAVGRPED 1233
+ N + + ++E L K E Y +L E VD+ +FT + E+
Sbjct: 1519 NPLLLN-YYMKRNEEELEYFLDFDKRYFGE-QYFSLLNTLNVENVDSGQFTYMSEDEKEE 1576
Query: 1234 DELVIEDTVRTDEPTDQG 1251
+E + ++ ++ ++G
Sbjct: 1577 NETYLSSIIKKEKKEEEG 1594
Score = 145 (56.1 bits), Expect = 2.2e-86, Sum P(6) = 2.2e-86
Identities = 31/78 (39%), Positives = 49/78 (62%)
Query: 984 YFPDRRLIQFDCGKLQELAILLRKLKSDGHRALIFTQMTKMLDILEEFISLYGYTYMRLD 1043
Y D +I+ GK + L +L KL H+ LIF+QMTK+++IL +++ GY Y RLD
Sbjct: 1182 YNIDENIIKCS-GKFEVLDRMLPKLLKFKHKVLIFSQMTKLMNILCDYLEFRGYKYHRLD 1240
Query: 1044 GSTQPEERQTLMQRFNTN 1061
G+ +ER+ ++ +FN N
Sbjct: 1241 GNIGLQERKKIIDQFNNN 1258
Score = 59 (25.8 bits), Expect = 2.2e-86, Sum P(6) = 2.2e-86
Identities = 28/107 (26%), Positives = 51/107 (47%)
Query: 1760 SSKLLSAALHDANSRQQDDKVSNFDRREDGPVIEQLDLTLEFQRELVDSTISFPPRVNLS 1819
S LLS+ D ++D S+ + D +E++ E + E +++T + +L+
Sbjct: 1852 SPNLLSSVEKDLGRNKKDIVKSDMEHNNDITTLEEVKDREEIKEEHLETTKNIS---SLN 1908
Query: 1820 VYGSDLETSVNKS-TREN-HHLKDSQV---AENRFRDAARACIEDSL 1861
+ +DLE +NK+ T EN H K S + R D + +E S+
Sbjct: 1909 I--NDLE--INKTLTNENVHSTKKSPYNMRSSKRRSDTSSTYMETSI 1951
Score = 51 (23.0 bits), Expect = 3.0e-55, Sum P(5) = 3.0e-55
Identities = 17/51 (33%), Positives = 28/51 (54%)
Query: 1307 FEN---QLRPIDRYAIRFLELWDPIIDKTAVESEVKFEEREWELDRIEKYK 1354
F+N QLR I + +L L+D ID+ ++ KFE + L ++ K+K
Sbjct: 1161 FQNIVMQLRKIVNHP--YLFLYDYNIDENIIKCSGKFEVLDRMLPKLLKFK 1209
Score = 47 (21.6 bits), Expect = 2.2e-86, Sum P(6) = 2.2e-86
Identities = 19/75 (25%), Positives = 41/75 (54%)
Query: 55 KALDKQLEFLLGQTERYS-SMLAENLVDSH-KPVQQSP-MREQPGIQYKEADENGAEEPG 111
KA+D++ + +L + ER +L +N ++++ K ++ + R Q + E N +
Sbjct: 716 KAIDQKRKIILEKEERERMKLLKDNDIEAYMKLIKTAKNKRLQELLDVTEQFLNNMSKCV 775
Query: 112 V-QSKEADEDDAEQH 125
+ Q KEA ++ +EQ+
Sbjct: 776 LYQKKEAYQESSEQN 790
Score = 47 (21.6 bits), Expect = 7.4e-55, Sum P(6) = 7.4e-55
Identities = 11/36 (30%), Positives = 21/36 (58%)
Query: 1110 QTREV--HIYRLISESTIEENILKKANQKRALDDLV 1143
Q R++ H Y + + I+ENI+K + + LD ++
Sbjct: 1167 QLRKIVNHPYLFLYDYNIDENIIKCSGKFEVLDRML 1202
Score = 45 (20.9 bits), Expect = 3.6e-86, Sum P(6) = 3.6e-86
Identities = 19/70 (27%), Positives = 39/70 (55%)
Query: 38 EKLVLYK-HQMEVDVRK-KKALDKQLEFLLGQTERYSSMLAENLVDSHKPV-QQSPMREQ 94
E++ L K + +E ++ K A +K+L+ LL TE++ + +++ ++ K Q+S +
Sbjct: 732 ERMKLLKDNDIEAYMKLIKTAKNKRLQELLDVTEQFLNNMSKCVLYQKKEAYQESSEQNF 791
Query: 95 PG-IQYKEAD 103
G I +K D
Sbjct: 792 HGLINHKNED 801
Score = 45 (20.9 bits), Expect = 6.5e-65, Sum P(6) = 6.5e-65
Identities = 16/73 (21%), Positives = 34/73 (46%)
Query: 1184 NEVSLSNADVEAALKCVEDEAD----YMA--LKRAEQEEAVDNQEFTEEAVGRPEDDELV 1237
N +++ N D EDE + Y++ +K+ ++EE ++ E + + ED +
Sbjct: 1554 NTLNVENVDSGQFTYMSEDEKEENETYLSSIIKKEKKEEEGEDDEENQRDRNKEEDQDED 1613
Query: 1238 IEDTVRTDEPTDQ 1250
+D D+ D+
Sbjct: 1614 KDDDKDKDKDKDK 1626
Score = 44 (20.5 bits), Expect = 1.5e-64, Sum P(4) = 1.5e-64
Identities = 13/36 (36%), Positives = 20/36 (55%)
Query: 1934 FDLIQEAWLEDMDGGRLSCMDQDLSLE--TVLSSEI 1967
F L+ +E++D G+ + M +D E T LSS I
Sbjct: 1550 FSLLNTLNVENVDSGQFTYMSEDEKEENETYLSSII 1585
Score = 44 (20.5 bits), Expect = 1.7e-14, Sum P(5) = 1.7e-14
Identities = 17/78 (21%), Positives = 32/78 (41%)
Query: 196 GRESSAEMGEDEAEPTVVEEGHVQGNGNDLLAGSKLDTSGSLVRRCDEINGGLSISENHL 255
G E+ G + + E ++ GN N ++G++ S D + + ISE
Sbjct: 1323 GNENMNMSGNENMNMSGNENMNMSGNENMNMSGNENIKMISSQNEKDTSSQSVKISELKK 1382
Query: 256 LDIETSQVRDTSKKSGAS 273
+I Q+ D +G +
Sbjct: 1383 EEINDFQIMDDKNVNGGN 1400
Score = 38 (18.4 bits), Expect = 1.9e-85, Sum P(6) = 1.9e-85
Identities = 9/35 (25%), Positives = 17/35 (48%)
Query: 254 HLLDIETSQVRDTSKKSGASTQKQALYDFSDEQED 288
HL ++ + +D KS + +K + DE E+
Sbjct: 112 HLEYLKRKKKKDKENKSKSKKEKNNKNEKDDEMEN 146
Score = 37 (18.1 bits), Expect = 2.2e-86, Sum P(6) = 2.2e-86
Identities = 7/13 (53%), Positives = 9/13 (69%)
Query: 1899 KSKLRKTSMEHSE 1911
K K R SMEH++
Sbjct: 1965 KGKKRNNSMEHTK 1977
>UNIPROTKB|O96239 [details] [associations]
symbol:PFB0730w "DEAD/DEAH box helicase, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0003678 "DNA helicase
activity" evidence=ISS] [GO:0006338 "chromatin remodeling"
evidence=ISS] [GO:0016514 "SWI/SNF complex" evidence=ISS]
[GO:0032508 "DNA duplex unwinding" evidence=ISS] InterPro:IPR000330
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003677 GO:GO:0006338
GO:GO:0016514 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0003678 KO:K11647 EMBL:AE001362 OMA:NENMNMS PIR:F71607
RefSeq:XP_001349665.1 ProteinModelPortal:O96239
EnsemblProtists:PFB0730w:mRNA GeneID:812747 KEGG:pfa:PFB0730w
EuPathDB:PlasmoDB:PF3D7_0216000 Uniprot:O96239
Length = 1997
Score = 630 (226.8 bits), Expect = 2.2e-86, Sum P(6) = 2.2e-86
Identities = 133/308 (43%), Positives = 194/308 (62%)
Query: 444 RTKFP-FLLKFPLREYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTIAMLAHLA-CEK 501
+ K P L+ L +YQ GL+WLV++Y L+GILADEMGLGKTI TI++ A+L +
Sbjct: 872 KVKQPSILIGGELMKYQLEGLEWLVSLYNNNLHGILADEMGLGKTIQTISLFAYLKEFKN 931
Query: 502 GIWGPHLIVVPTSVMLNWETEFLKWCPAFKILTYFGSAKERKFKRQGWLKPNSFHVCITT 561
I +LI+VP S + NW +EF +WCP+ ++TY G+ ERK + L+ +F +CITT
Sbjct: 932 NINVKNLIIVPLSTLPNWISEFNRWCPSLNVITYRGNKLERKHIAKKLLE-QTFDICITT 990
Query: 562 YRLIIQDSKVFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPLQNDLME 621
+ L+I++ + W Y+++DE H +KN KS+ L F SK RILLTGTPLQN+L E
Sbjct: 991 FDLVIKEKSFLMKISWNYIVVDEGHRMKNNKSRFHVFLSEFKSKYRILLTGTPLQNNLSE 1050
Query: 622 LWSLMHFLMPHIFQSHQEFKDWFCNPISGMVEGQEKVNKE----VVDRLHNVLRPFILRR 677
LWSL++FL+P IF S +F+ WF + + E + +E +++RLH+VL PF+LRR
Sbjct: 1051 LWSLLNFLLPKIFSSCVDFEKWFVKSLHNEKDVYEHITEEEQLLIINRLHSVLLPFMLRR 1110
Query: 678 LKRDVEKQLPMKQEHVIYCRLSKRQRNLYEDFIASSETQATLASANFFGMI-SVIMQLRK 736
+K+DV K LP K E+ I+ LS Q+ LY+ Q + + +++MQLRK
Sbjct: 1111 VKKDVLKSLPKKYEYNIHIELSLYQKILYKQIQTKGFKQVNHNGSITTKIFQNIVMQLRK 1170
Query: 737 VCNHPDLF 744
+ NHP LF
Sbjct: 1171 IVNHPYLF 1178
Score = 252 (93.8 bits), Expect = 2.2e-86, Sum P(6) = 2.2e-86
Identities = 66/198 (33%), Positives = 105/198 (53%)
Query: 1061 NPKIFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQDRCHRIGQTREVHIYRLI 1120
N +FILSTRSG +G+NL ADTVI +DSD+NP D QA RCHRIGQ V ++R I
Sbjct: 1400 NQDAMIFILSTRSGSLGLNLQTADTVIIFDSDFNPHQDIQAMCRCHRIGQKNVVKVFRFI 1459
Query: 1121 SESTIEENILKKANQKRALDDLVIQSGGYNTEFFKKLDPM----ELFSGHRTLPMKTMQK 1176
+ S +EE + KKA K +++D VIQ+G +N + + D ++ ++ M T
Sbjct: 1460 TLSGVEELVFKKAQHKLSINDKVIQAGLFN-KIYNDEDRQNKLKDIIQRNQKNDMTTHPT 1518
Query: 1177 EKAINNGNEVSLSNADVEAAL---KCVEDEADYMALKRAEQEEAVDNQEFTEEAVGRPED 1233
+ N + + ++E L K E Y +L E VD+ +FT + E+
Sbjct: 1519 NPLLLN-YYMKRNEEELEYFLDFDKRYFGE-QYFSLLNTLNVENVDSGQFTYMSEDEKEE 1576
Query: 1234 DELVIEDTVRTDEPTDQG 1251
+E + ++ ++ ++G
Sbjct: 1577 NETYLSSIIKKEKKEEEG 1594
Score = 145 (56.1 bits), Expect = 2.2e-86, Sum P(6) = 2.2e-86
Identities = 31/78 (39%), Positives = 49/78 (62%)
Query: 984 YFPDRRLIQFDCGKLQELAILLRKLKSDGHRALIFTQMTKMLDILEEFISLYGYTYMRLD 1043
Y D +I+ GK + L +L KL H+ LIF+QMTK+++IL +++ GY Y RLD
Sbjct: 1182 YNIDENIIKCS-GKFEVLDRMLPKLLKFKHKVLIFSQMTKLMNILCDYLEFRGYKYHRLD 1240
Query: 1044 GSTQPEERQTLMQRFNTN 1061
G+ +ER+ ++ +FN N
Sbjct: 1241 GNIGLQERKKIIDQFNNN 1258
Score = 59 (25.8 bits), Expect = 2.2e-86, Sum P(6) = 2.2e-86
Identities = 28/107 (26%), Positives = 51/107 (47%)
Query: 1760 SSKLLSAALHDANSRQQDDKVSNFDRREDGPVIEQLDLTLEFQRELVDSTISFPPRVNLS 1819
S LLS+ D ++D S+ + D +E++ E + E +++T + +L+
Sbjct: 1852 SPNLLSSVEKDLGRNKKDIVKSDMEHNNDITTLEEVKDREEIKEEHLETTKNIS---SLN 1908
Query: 1820 VYGSDLETSVNKS-TREN-HHLKDSQV---AENRFRDAARACIEDSL 1861
+ +DLE +NK+ T EN H K S + R D + +E S+
Sbjct: 1909 I--NDLE--INKTLTNENVHSTKKSPYNMRSSKRRSDTSSTYMETSI 1951
Score = 51 (23.0 bits), Expect = 3.0e-55, Sum P(5) = 3.0e-55
Identities = 17/51 (33%), Positives = 28/51 (54%)
Query: 1307 FEN---QLRPIDRYAIRFLELWDPIIDKTAVESEVKFEEREWELDRIEKYK 1354
F+N QLR I + +L L+D ID+ ++ KFE + L ++ K+K
Sbjct: 1161 FQNIVMQLRKIVNHP--YLFLYDYNIDENIIKCSGKFEVLDRMLPKLLKFK 1209
Score = 47 (21.6 bits), Expect = 2.2e-86, Sum P(6) = 2.2e-86
Identities = 19/75 (25%), Positives = 41/75 (54%)
Query: 55 KALDKQLEFLLGQTERYS-SMLAENLVDSH-KPVQQSP-MREQPGIQYKEADENGAEEPG 111
KA+D++ + +L + ER +L +N ++++ K ++ + R Q + E N +
Sbjct: 716 KAIDQKRKIILEKEERERMKLLKDNDIEAYMKLIKTAKNKRLQELLDVTEQFLNNMSKCV 775
Query: 112 V-QSKEADEDDAEQH 125
+ Q KEA ++ +EQ+
Sbjct: 776 LYQKKEAYQESSEQN 790
Score = 47 (21.6 bits), Expect = 7.4e-55, Sum P(6) = 7.4e-55
Identities = 11/36 (30%), Positives = 21/36 (58%)
Query: 1110 QTREV--HIYRLISESTIEENILKKANQKRALDDLV 1143
Q R++ H Y + + I+ENI+K + + LD ++
Sbjct: 1167 QLRKIVNHPYLFLYDYNIDENIIKCSGKFEVLDRML 1202
Score = 45 (20.9 bits), Expect = 3.6e-86, Sum P(6) = 3.6e-86
Identities = 19/70 (27%), Positives = 39/70 (55%)
Query: 38 EKLVLYK-HQMEVDVRK-KKALDKQLEFLLGQTERYSSMLAENLVDSHKPV-QQSPMREQ 94
E++ L K + +E ++ K A +K+L+ LL TE++ + +++ ++ K Q+S +
Sbjct: 732 ERMKLLKDNDIEAYMKLIKTAKNKRLQELLDVTEQFLNNMSKCVLYQKKEAYQESSEQNF 791
Query: 95 PG-IQYKEAD 103
G I +K D
Sbjct: 792 HGLINHKNED 801
Score = 45 (20.9 bits), Expect = 6.5e-65, Sum P(6) = 6.5e-65
Identities = 16/73 (21%), Positives = 34/73 (46%)
Query: 1184 NEVSLSNADVEAALKCVEDEAD----YMA--LKRAEQEEAVDNQEFTEEAVGRPEDDELV 1237
N +++ N D EDE + Y++ +K+ ++EE ++ E + + ED +
Sbjct: 1554 NTLNVENVDSGQFTYMSEDEKEENETYLSSIIKKEKKEEEGEDDEENQRDRNKEEDQDED 1613
Query: 1238 IEDTVRTDEPTDQ 1250
+D D+ D+
Sbjct: 1614 KDDDKDKDKDKDK 1626
Score = 44 (20.5 bits), Expect = 1.5e-64, Sum P(4) = 1.5e-64
Identities = 13/36 (36%), Positives = 20/36 (55%)
Query: 1934 FDLIQEAWLEDMDGGRLSCMDQDLSLE--TVLSSEI 1967
F L+ +E++D G+ + M +D E T LSS I
Sbjct: 1550 FSLLNTLNVENVDSGQFTYMSEDEKEENETYLSSII 1585
Score = 44 (20.5 bits), Expect = 1.7e-14, Sum P(5) = 1.7e-14
Identities = 17/78 (21%), Positives = 32/78 (41%)
Query: 196 GRESSAEMGEDEAEPTVVEEGHVQGNGNDLLAGSKLDTSGSLVRRCDEINGGLSISENHL 255
G E+ G + + E ++ GN N ++G++ S D + + ISE
Sbjct: 1323 GNENMNMSGNENMNMSGNENMNMSGNENMNMSGNENIKMISSQNEKDTSSQSVKISELKK 1382
Query: 256 LDIETSQVRDTSKKSGAS 273
+I Q+ D +G +
Sbjct: 1383 EEINDFQIMDDKNVNGGN 1400
Score = 38 (18.4 bits), Expect = 1.9e-85, Sum P(6) = 1.9e-85
Identities = 9/35 (25%), Positives = 17/35 (48%)
Query: 254 HLLDIETSQVRDTSKKSGASTQKQALYDFSDEQED 288
HL ++ + +D KS + +K + DE E+
Sbjct: 112 HLEYLKRKKKKDKENKSKSKKEKNNKNEKDDEMEN 146
Score = 37 (18.1 bits), Expect = 2.2e-86, Sum P(6) = 2.2e-86
Identities = 7/13 (53%), Positives = 9/13 (69%)
Query: 1899 KSKLRKTSMEHSE 1911
K K R SMEH++
Sbjct: 1965 KGKKRNNSMEHTK 1977
>ZFIN|ZDB-GENE-030131-9923 [details] [associations]
symbol:hells "helicase, lymphoid-specific"
species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000775
"chromosome, centromeric region" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0045132 "meiotic chromosome segregation"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR000330
InterPro:IPR001650 InterPro:IPR011515 Pfam:PF00176 Pfam:PF00271
Pfam:PF07557 PROSITE:PS51194 SMART:SM00490
ZFIN:ZDB-GENE-030131-9923 GO:GO:0005524 GO:GO:0005634 GO:GO:0000775
GO:GO:0003677 GO:GO:0004386 GO:GO:0045132 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 CTD:3070 HOVERGEN:HBG060049
EMBL:AY612850 IPI:IPI00817585 RefSeq:NP_001032178.1
UniGene:Dr.75180 ProteinModelPortal:Q3BDS6 STRING:Q3BDS6
GeneID:553328 KEGG:dre:553328 InParanoid:Q3BDS6 NextBio:20880094
ArrayExpress:Q3BDS6 Uniprot:Q3BDS6
Length = 853
Score = 503 (182.1 bits), Expect = 9.7e-86, Sum P(3) = 9.7e-86
Identities = 109/263 (41%), Positives = 159/263 (60%)
Query: 455 LREYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTIAMLAHLACEKGIWGPHLIVVPTS 514
+R YQ G++WL ++E +NGILADEMGLGKTI IA +A + EK + GP L+V P S
Sbjct: 233 MRWYQVEGIEWLRMLWENGINGILADEMGLGKTIQCIAHIAMMV-EKKVLGPFLVVAPLS 291
Query: 515 VMLNWETEFLKWCPAFKILTYFGSAKER-----KFKR-QGWLKPNSFHVCITTYRLIIQD 568
+ NW +EF ++ P +L Y G KER K ++ QG L+ V +T++ + ++D
Sbjct: 292 TLPNWISEFKRFTPEVSVLLYHGPQKERLDLVKKIRQHQGSLR--MCPVVVTSFEIAMRD 349
Query: 569 SKVFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPLQNDLMELWSLMHF 628
K +R W YLI+DE H IKN + Q L + ++LLTGTPLQN+L ELWSL++F
Sbjct: 350 RKFLQRFHWNYLIVDEGHRIKNLNCRLVQELKMLPTDNKLLLTGTPLQNNLSELWSLLNF 409
Query: 629 LMPHIFQSHQEFKDWFCNPISGMVEGQEKV-----NKEVVDRLHNVLRPFILRRLKRDVE 683
L+P +F + F+ WF IS + E + + ++ LH +L PF+LRRLK DV
Sbjct: 410 LLPDVFDDLKSFESWF--DISTITSDAENIVANEREQNILHMLHLILTPFLLRRLKSDVT 467
Query: 684 KQLPMKQEHVIYCRLSKRQRNLY 706
++P K+E V+Y L+ +Q Y
Sbjct: 468 LEVPPKKEIVVYAPLTNKQEAFY 490
Score = 449 (163.1 bits), Expect = 9.7e-86, Sum P(3) = 9.7e-86
Identities = 98/233 (42%), Positives = 145/233 (62%)
Query: 987 DRRLIQFDCGKLQELAILLRKLKSDGHRALIFTQMTKMLDILEEFISLYGYTYMRLDGST 1046
D +L++ GK L +L +LK GH+ LIF+QMT +LDIL ++ L GY Y RLDGS
Sbjct: 607 DEQLVEAS-GKFLILDRMLPELKKRGHKVLIFSQMTSILDILMDYCYLRGYEYSRLDGSM 665
Query: 1047 QPEERQTLMQRFNTNPKIFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQDRCH 1106
+R M++F+++P++FLF+LSTR+GG+GINL ADTVI +DSDWNP D QAQDRCH
Sbjct: 666 SYADRDENMKKFSSDPEVFLFLLSTRAGGLGINLTSADTVIIFDSDWNPQADLQAQDRCH 725
Query: 1107 RIGQTREVHIYRLISESTIEENILKKANQKRALDDLVIQSGGYNTEFFKKLDPMELFSGH 1166
RIGQT+ V ++RLI+ +TI+E IL++A+ KR L+ +VI + +
Sbjct: 726 RIGQTKPVVVHRLITANTIDEKILERASAKRKLEKMVIHKNKFKGSKAELKQSKSCLDVD 785
Query: 1167 RTLPM-KTMQKEKAINNGNEVSLSNADVEAALKCVEDEADYM--ALKRAEQEE 1216
+ + K+ + A+ +S+ D++ L D +D M A KR +QE+
Sbjct: 786 ELVELLKSRDYDGAVKGTKGKVISDKDLQILL----DRSDLMDQAKKRVKQEK 834
Score = 44 (20.5 bits), Expect = 9.7e-86, Sum P(3) = 9.7e-86
Identities = 7/17 (41%), Positives = 12/17 (70%)
Query: 729 SVIMQLRKVCNHPDLFE 745
+++M L++ CNH L E
Sbjct: 578 NILMLLKRCCNHAYLIE 594
Score = 38 (18.4 bits), Expect = 1.0e-42, Sum P(3) = 1.0e-42
Identities = 10/42 (23%), Positives = 22/42 (52%)
Query: 1177 EKAINNGNEVSLSNADVEAALKCVEDEADYMALKRAEQEEAV 1218
EK + + N+ S A+++ + C++ + LK + + AV
Sbjct: 759 EKMVIHKNKFKGSKAELKQSKSCLDVDELVELLKSRDYDGAV 800
>UNIPROTKB|I3LRQ2 [details] [associations]
symbol:CHD2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
GeneTree:ENSGT00560000076896 EMBL:CT954235 EMBL:CU466964
Ensembl:ENSSSCT00000027293 Uniprot:I3LRQ2
Length = 1051
Score = 549 (198.3 bits), Expect = 2.2e-85, Sum P(3) = 2.2e-85
Identities = 116/292 (39%), Positives = 174/292 (59%)
Query: 455 LREYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTIAMLAHLACEKGIWGPHLIVVPTS 514
LR+YQ GL+WL + K + ILADEMGLGKTI TI+ L++L + ++GP LIVVP S
Sbjct: 486 LRDYQLEGLNWLAHSWCKSNSVILADEMGLGKTIQTISFLSYLFHQHQLYGPFLIVVPLS 545
Query: 515 VMLNWETEFLKWCPAFKILTYFGSAKERKFKRQ-GWL----KPNSFHVCITTYRLIIQDS 569
+ +W+ EF W P ++ Y G R R+ W+ K F+ ITTY ++++D
Sbjct: 546 TLTSWQREFEIWAPEINVVVYIGDLMSRNTIREYEWIHSQTKRLKFNALITTYEILLKDK 605
Query: 570 KVFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPLQNDLMELWSLMHFL 629
V W +L +DEAH +KN S ++TL++F S R+L+TGTPLQN L ELWSL+HF+
Sbjct: 606 TVLGSINWAFLGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSLLHFI 665
Query: 630 MPHIFQSHQEFKDWFCNPISGMVEGQEKVNKEVVDRLHNVLRPFILRRLKRDVEKQLPMK 689
MP F+ ++F++ + G G + LH VL PF+LRR+K+DVEK LP K
Sbjct: 666 MPEKFEFWEDFEE---DHGKGRENGYQS--------LHKVLEPFLLRRVKKDVEKSLPAK 714
Query: 690 QEHVIYCRLSKRQRNLYEDFIASS-ETQATLASANFFGMISVIMQLRKVCNH 740
E ++ +S Q+ Y+ + + + A + G ++++M+L+K CNH
Sbjct: 715 VEQILRVEMSALQKQYYKWILTRNYKALAKGTRGSTSGFLNIVMELKKCCNH 766
Score = 403 (146.9 bits), Expect = 2.2e-85, Sum P(3) = 2.2e-85
Identities = 79/151 (52%), Positives = 110/151 (72%)
Query: 996 GKLQELAILLRKLKSDGHRALIFTQMTKMLDILEEFISLYGYTYMRLDGSTQPEERQTLM 1055
GKL L LL +L+ G+R LIF+QM +MLDIL E++++ Y + RLDGS + E R+ +
Sbjct: 793 GKLILLDKLLTRLRERGNRVLIFSQMVRMLDILAEYLTIKHYPFQRLDGSIKGEIRKQAL 852
Query: 1056 QRFNTN-PKIFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQDRCHRIGQTREV 1114
FN + + F F+LSTR+GG+GINL ADTV+ +DSDWNP D QAQ R HRIGQ ++V
Sbjct: 853 DHFNADGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQV 912
Query: 1115 HIYRLISESTIEENILKKANQKRALDDLVIQ 1145
+IYRL+++ T+EE I+++A +K LD LVIQ
Sbjct: 913 NIYRLVTKGTVEEEIIERAKKKMVLDHLVIQ 943
Score = 47 (21.6 bits), Expect = 2.2e-85, Sum P(3) = 2.2e-85
Identities = 18/83 (21%), Positives = 36/83 (43%)
Query: 54 KKALDKQLEFLLGQTERYSSMLAENLVDSHKPVQQSPMREQPGIQYKEAD--ENGAEEPG 111
K + KQ + G+ ++ S ++ D P +Q+ R + YKE D E +++
Sbjct: 187 KPRVKKQPKTQRGKRKKQDSSDDDD-EDDEAPKRQTRRRAAKNVSYKEDDDFETDSDDLI 245
Query: 112 VQSKEADEDDAEQHSGFEPQLDA 134
+ E ++ + E LD+
Sbjct: 246 EMTGEGVDEQQDNSETIEKVLDS 268
Score = 37 (18.1 bits), Expect = 2.5e-84, Sum P(3) = 2.5e-84
Identities = 10/38 (26%), Positives = 17/38 (44%)
Query: 199 SSAEMGEDEAEPTVVEEGHVQGNGNDLLAGSKLDTSGS 236
S G D + E+G G+G+ + S ++S S
Sbjct: 24 SEEASGSDSGSQSESEQGSDPGSGHGSESNSSSESSES 61
>UNIPROTKB|J9NSS6 [details] [associations]
symbol:CHD2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
GeneTree:ENSGT00560000076896 EMBL:AAEX03002279 EMBL:AAEX03002280
Ensembl:ENSCAFT00000043290 Uniprot:J9NSS6
Length = 1379
Score = 548 (198.0 bits), Expect = 5.5e-85, Sum P(4) = 5.5e-85
Identities = 116/292 (39%), Positives = 174/292 (59%)
Query: 455 LREYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTIAMLAHLACEKGIWGPHLIVVPTS 514
LR+YQ GL+WL + K + ILADEMGLGKTI TI+ L++L + ++GP LIVVP S
Sbjct: 484 LRDYQLEGLNWLAHSWCKSNSVILADEMGLGKTIQTISFLSYLFHQHQLYGPFLIVVPLS 543
Query: 515 VMLNWETEFLKWCPAFKILTYFGSAKERKFKRQ-GWL----KPNSFHVCITTYRLIIQDS 569
+ +W+ EF W P ++ Y G R R+ W+ K F+ ITTY ++++D
Sbjct: 544 TLTSWQREFEIWAPEINVVVYIGDLMSRNTIREYEWIHSQTKRLKFNALITTYEILLKDK 603
Query: 570 KVFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPLQNDLMELWSLMHFL 629
V W +L +DEAH +KN S ++TL++F S R+L+TGTPLQN L ELWSL+HF+
Sbjct: 604 TVLGSINWAFLGVDEAHRLKNDDSLLYKTLIDFKSHHRLLITGTPLQNSLKELWSLLHFI 663
Query: 630 MPHIFQSHQEFKDWFCNPISGMVEGQEKVNKEVVDRLHNVLRPFILRRLKRDVEKQLPMK 689
MP F+ ++F++ + G G + LH VL PF+LRR+K+DVEK LP K
Sbjct: 664 MPEKFEFWEDFEE---DHGKGRENGYQS--------LHKVLEPFLLRRVKKDVEKSLPAK 712
Query: 690 QEHVIYCRLSKRQRNLYEDFIASS-ETQATLASANFFGMISVIMQLRKVCNH 740
E ++ +S Q+ Y+ + + + A + G ++++M+L+K CNH
Sbjct: 713 VEQILRVEMSALQKQYYKWILTRNYKALAKGTRGSTSGFLNIVMELKKCCNH 764
Score = 403 (146.9 bits), Expect = 5.5e-85, Sum P(4) = 5.5e-85
Identities = 79/151 (52%), Positives = 110/151 (72%)
Query: 996 GKLQELAILLRKLKSDGHRALIFTQMTKMLDILEEFISLYGYTYMRLDGSTQPEERQTLM 1055
GKL L LL +L+ G+R LIF+QM +MLDIL E++++ Y + RLDGS + E R+ +
Sbjct: 791 GKLILLDKLLTRLRERGNRVLIFSQMVRMLDILAEYLTIKHYPFQRLDGSIKGEIRKQAL 850
Query: 1056 QRFNTN-PKIFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQDRCHRIGQTREV 1114
FN + + F F+LSTR+GG+GINL ADTV+ +DSDWNP D QAQ R HRIGQ ++V
Sbjct: 851 DHFNADGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQV 910
Query: 1115 HIYRLISESTIEENILKKANQKRALDDLVIQ 1145
+IYRL+++ T+EE I+++A +K LD LVIQ
Sbjct: 911 NIYRLVTKGTVEEEIIERAKKKMVLDHLVIQ 941
Score = 52 (23.4 bits), Expect = 5.5e-85, Sum P(4) = 5.5e-85
Identities = 29/115 (25%), Positives = 53/115 (46%)
Query: 1571 IKPEKLKKGNVWSRDCVPSPDV-WLPQEDAILCAVVHEYG-PNWSLV-SDILYGMTASGY 1627
+ PE+ KK + R DV W ++D+ L ++E+G NW L+ +D +T
Sbjct: 1238 VDPEEKKKYCLTCRVKAAHFDVEWGVEDDSRLLLGIYEHGYGNWELIKTDPELKLTDKIL 1297
Query: 1628 YRGRYRHPVHCCERFRELIQR--YILSVPDNSINEKTSNVGSGKALLKVTEDNVR 1680
+ P + ++L R Y+L + S+ +K + G +A LK + V+
Sbjct: 1298 PVETDKKP-----QGKQLQTRADYLLKLLRKSLEKKGAVTGGEEAKLKKRKPRVK 1347
Score = 51 (23.0 bits), Expect = 5.5e-85, Sum P(4) = 5.5e-85
Identities = 19/83 (22%), Positives = 36/83 (43%)
Query: 54 KKALDKQLEFLLGQTERYSSMLAENLVDSHKPVQQSPMREQPGIQYKEAD--ENGAEEPG 111
K + KQ + G+ +R S ++ D P +Q+ R + YKE D E +++
Sbjct: 188 KPRVKKQPKTQRGKRKRQDSSDDDD-EDDEAPKRQTRRRAAKNVSYKEDDDFETDSDDLI 246
Query: 112 VQSKEADEDDAEQHSGFEPQLDA 134
+ E ++ + E LD+
Sbjct: 247 EMTGEGADEQQDNSETIEKVLDS 269
Score = 37 (18.1 bits), Expect = 1.6e-83, Sum P(4) = 1.6e-83
Identities = 10/38 (26%), Positives = 17/38 (44%)
Query: 199 SSAEMGEDEAEPTVVEEGHVQGNGNDLLAGSKLDTSGS 236
S G D + E+G G+G+ + S ++S S
Sbjct: 25 SEEASGSDSGSQSESEQGSDPGSGHGSESNSSSESSES 62
>WB|WBGene00010845 [details] [associations]
symbol:M03C11.8 species:6239 "Caenorhabditis elegans"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0009792 "embryo development
ending in birth or egg hatching" evidence=IMP] InterPro:IPR000330
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005634 GO:GO:0009792
GO:GO:0003677 GO:GO:0006281 GO:GO:0016568 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 KO:K14439
GeneTree:ENSGT00630000089890 EMBL:Z49128 EMBL:AL021171 PIR:T23046
RefSeq:NP_499301.2 ProteinModelPortal:G5EDG2 SMR:G5EDG2
EnsemblMetazoa:M03C11.8 GeneID:176462 KEGG:cel:CELE_M03C11.8
WormBase:M03C11.8 OMA:KEERYMA NextBio:892680 Uniprot:G5EDG2
Length = 989
Score = 560 (202.2 bits), Expect = 5.7e-85, Sum P(2) = 5.7e-85
Identities = 124/297 (41%), Positives = 177/297 (59%)
Query: 455 LREYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTIAMLAHLACEKGIWGPHLIVVPTS 514
L +YQ IG+ WL+ MY K LN IL DEMGLGKTI +A L++L + G GPHLIVVP+S
Sbjct: 394 LHDYQLIGVKWLIMMYNKDLNAILGDEMGLGKTIQIVAFLSYLK-QIGKTGPHLIVVPSS 452
Query: 515 VMLNWETEFLKWCPAFKILTYFGSAKERKFKRQGWLKPNSFH--VCITTYRLIIQ---DS 569
+ NW EF KWCP+ ++LTY+GS ERK R +K H V +TTY ++ D
Sbjct: 453 TIENWIGEFHKWCPSIQLLTYYGSQDERKHLRHR-VKKQKDHIDVILTTYNMVTSKSDDK 511
Query: 570 KVFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPLQNDLMELWSLMHFL 629
K FK Y+I DE H++KN S+R++ L+ K++ILLTGTPLQN+L+EL SLM+F+
Sbjct: 512 KFFKNFSLNYVIYDEGHMLKNCDSERYRGLMKVKGKKKILLTGTPLQNNLIELISLMYFV 571
Query: 630 MPHIFQSHQEFKDWFCNPISGMVEGQEKVNKEVV--DRLHN---VLRPFILRRLKRDVEK 684
+ +F + E + + NK + DR+ +L+P+ILRRLK V
Sbjct: 572 LSKVFNKYCEDITHLLQHFKQLGPALDTKNKALYQQDRIEEAKAILQPYILRRLKNQVLG 631
Query: 685 QLPMKQEHVIYCRLSKRQRNLYEDFIASSETQATLASANFFGMISVIMQLRKVCNHP 741
LP K E +I + K Q+ LY++ + + Q + S + +G + M+LR+ NHP
Sbjct: 632 SLPSKSEQIIEVEMKKPQKQLYDNIVEA--LQQSEESGDSYGSL---MRLRQAANHP 683
Score = 382 (139.5 bits), Expect = 5.7e-85, Sum P(2) = 5.7e-85
Identities = 84/229 (36%), Positives = 138/229 (60%)
Query: 996 GKLQELAILLRKLKSDGHRALIFTQMTKMLDILEEFISLYGYTYMRLDGSTQPEERQTLM 1055
GK ++L ++L +++ G + LIF+Q T MLDILE ++++ GY+Y RLDG T +RQ ++
Sbjct: 753 GKCEQLDVMLPEIQKKGDKVLIFSQFTSMLDILEVYLNIRGYSYKRLDGQTPVLDRQEMI 812
Query: 1056 QRFNTNPKIFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQDRCHRIGQTREVH 1115
FN + +F+F+LSTR+GG+GINL A+ +I +D D+NP D+QA+DRCHR+GQ + VH
Sbjct: 813 NEFNLSKDLFVFLLSTRAGGLGINLTSANHIIIHDIDFNPYNDKQAEDRCHRMGQEKPVH 872
Query: 1116 IYRLISESTIEENILKKANQKRALDDLVIQS--GGYNTEFFKKL---DPMELFSGH---R 1167
+ RL+S+ T+E +L A +K L+ V G + + ++L + E G +
Sbjct: 873 VTRLVSKGTVEVGMLALAKKKLQLEKQVTDGVKGQLDEDALRELKEEEGGEQCGGRDLSK 932
Query: 1168 TLPMKTMQKEKAINNGNEVSLSNADVEAALKCVEDEADYMALKRAEQEE 1216
L + + + + S + D E A K EDEA +++ +Q+E
Sbjct: 933 LLSSAISGRYDDVEDDSGDSKNGIDAEEAAK-KEDEAVKEPVEKEQQKE 980
Score = 37 (18.1 bits), Expect = 3.8e-29, Sum P(2) = 3.8e-29
Identities = 16/62 (25%), Positives = 31/62 (50%)
Query: 563 RLIIQDSKVFKRKKWKYLILDEAHL--IK-NWKSQRWQTLLNFNSKRRILL-TGTPLQND 618
+++ K + KKW+++ D A L IK + +R++ F ++ L +G Q D
Sbjct: 700 KMLCLREKAYADKKWQHVSEDLAWLSDIKIHQLCERFRCTSKFLLNEQLALKSGKCEQLD 759
Query: 619 LM 620
+M
Sbjct: 760 VM 761
>SGD|S000001934 [details] [associations]
symbol:IRC5 "Putative ATPase containing the DEAD/H
helicase-related sequence motif" species:4932 "Saccharomyces
cerevisiae" [GO:0006312 "mitotic recombination" evidence=IMP]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR000330
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 SGD:S000001934 GO:GO:0005524 GO:GO:0005634
GO:GO:0003677 EMBL:D50617 EMBL:BK006940 GO:GO:0004386
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006312 GeneTree:ENSGT00550000075106 PIR:S56293
RefSeq:NP_116696.2 ProteinModelPortal:P43610 SMR:P43610
DIP:DIP-5300N MINT:MINT-543614 STRING:P43610 PaxDb:P43610
PRIDE:P43610 EnsemblFungi:YFR038W GeneID:850599 KEGG:sce:YFR038W
CYGD:YFR038w OMA:FEIFNKW OrthoDB:EOG40S3Q6 NextBio:966463
Genevestigator:P43610 GermOnline:YFR038W Uniprot:P43610
Length = 853
Score = 535 (193.4 bits), Expect = 1.0e-84, Sum P(3) = 1.0e-84
Identities = 119/277 (42%), Positives = 169/277 (61%)
Query: 446 KFPFLLK-FPLREYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTIAMLAHLACEKGIW 504
K P LLK L+ YQ GL+WL+T+YE LNGILADEMGLGKT+ +IA+LA + E
Sbjct: 212 KQPRLLKNCILKPYQLEGLNWLITLYENGLNGILADEMGLGKTVQSIALLAFIY-EMDTK 270
Query: 505 GPHLIVVPTSVMLNWETEFLKWCPAFKILTYFGSA--KERKFKRQGWLKPNS-FHVCITT 561
GP L+ P S + NW EF K+ P +L Y+G+ KER K + + K + + IT+
Sbjct: 271 GPFLVTAPLSTLDNWMNEFAKFAPDLPVLKYYGTNGYKERSAKLKNFFKQHGGTGIVITS 330
Query: 562 YRLIIQDSKVFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPLQNDLME 621
Y +I++D+ + + WK+LI+DE H +KN + + L N+ R+LLTGTPLQN+L E
Sbjct: 331 YEIILRDTDLIMSQNWKFLIVDEGHRLKNINCRLIKELKKINTSNRLLLTGTPLQNNLAE 390
Query: 622 LWSLMHFLMPHIFQSHQEFKDWF----CNPISGM-VEGQEK-VN----KEVVDRLHNVLR 671
LWSL++F+MP IF + F WF N SG E K +N K ++ LH +L+
Sbjct: 391 LWSLLNFIMPDIFADFEIFNKWFDFDSLNLGSGSNSEALNKLINDELQKNLISNLHTILK 450
Query: 672 PFILRRLKRDVEKQ-LPMKQEHVIYCRLSKRQRNLYE 707
PF+LRRLK+ V LP K+E++I C ++ Q Y+
Sbjct: 451 PFLLRRLKKVVLANILPPKREYIINCPMTSAQEKFYK 487
Score = 400 (145.9 bits), Expect = 1.0e-84, Sum P(3) = 1.0e-84
Identities = 81/163 (49%), Positives = 112/163 (68%)
Query: 996 GKLQELAILLRKLKSDGHRALIFTQMTKMLDILEEFISLYGYTYMRLDGSTQPEERQTLM 1055
GKLQ L L+ L S+GH+ LI++Q MLD++E++ L + R+DGS E R+ +
Sbjct: 603 GKLQILQKLIPPLISEGHKVLIYSQFVNMLDLIEDWCDLNSFATFRIDGSVNNETRKDQL 662
Query: 1056 QRFNTNP-KIFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQDRCHRIGQTREV 1114
++FN++ K +F+LSTR+ G+GINLVGADTV+ +DSDWNP +D QA DRCHRIGQ V
Sbjct: 663 EKFNSSKDKHNIFLLSTRAAGLGINLVGADTVVLFDSDWNPQVDLQAMDRCHRIGQESPV 722
Query: 1115 HIYRLISESTIEENILKKANQKRALDDLVIQSGGYNTEFFKKL 1157
+YRL ++TIE IL +A KR L+ +VIQ G +N KKL
Sbjct: 723 IVYRLCCDNTIEHVILTRAANKRNLERMVIQMGKFNN--LKKL 763
Score = 47 (21.6 bits), Expect = 1.0e-84, Sum P(3) = 1.0e-84
Identities = 14/58 (24%), Positives = 28/58 (48%)
Query: 36 KIEKLVLYKHQMEVDVRKKKALDKQLEFLLGQTERYSSMLAENLVDSHKPVQQSPMRE 93
K E+ L E+D + K+L + Q++ YSS++A+ L+ V + ++
Sbjct: 108 KSEQKSLDDELSEMDTKTVSLKLKKLNEFVRQSQVYSSIIADTLLHRSNEVANANTKD 165
Score = 43 (20.2 bits), Expect = 6.3e-32, Sum P(3) = 6.3e-32
Identities = 15/48 (31%), Positives = 23/48 (47%)
Query: 780 LKGLGLLFTNLDFSMNSWESDELNAIATPASLIKERADLNNLEEVGPF 827
L+GL L T + +N +DE+ T S I A + ++ GPF
Sbjct: 227 LEGLNWLITLYENGLNGILADEMGLGKTVQS-IALLAFIYEMDTKGPF 273
Score = 42 (19.8 bits), Expect = 6.2e-32, Sum P(2) = 6.2e-32
Identities = 9/16 (56%), Positives = 13/16 (81%)
Query: 899 VRRSYLYSSKLADIVL 914
VR+S +YSS +AD +L
Sbjct: 137 VRQSQVYSSIIADTLL 152
Score = 40 (19.1 bits), Expect = 1.0e-31, Sum P(2) = 1.0e-31
Identities = 10/44 (22%), Positives = 21/44 (47%)
Query: 25 NISKDVKKFWMKIEKLVLYKHQMEVDVRKKKALDKQLEFLLGQT 68
N + ++++KL QME+ +K + + QL ++ T
Sbjct: 537 NTDNKINPTLLQMDKLYKKNLQMEISNKKLQNMMMQLRQIIDST 580
Score = 37 (18.1 bits), Expect = 1.1e-46, Sum P(3) = 1.1e-46
Identities = 12/30 (40%), Positives = 16/30 (53%)
Query: 1647 QRYILSVPDNSINEKTSNVG-SGKALLKVT 1675
+ YI++ P S EK G +GK LK T
Sbjct: 470 REYIINCPMTSAQEKFYKAGLNGK--LKKT 497
>UNIPROTKB|E1C1A9 [details] [associations]
symbol:CHD2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
InterPro:IPR025260 Pfam:PF13907 GeneTree:ENSGT00560000076896
OMA:AHSWCKN EMBL:AADN02041467 EMBL:AADN02041468 EMBL:AADN02041469
EMBL:AADN02041470 IPI:IPI00575702 Ensembl:ENSGALT00000011260
Uniprot:E1C1A9
Length = 1727
Score = 553 (199.7 bits), Expect = 1.1e-84, Sum P(4) = 1.1e-84
Identities = 116/294 (39%), Positives = 176/294 (59%)
Query: 455 LREYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTIAMLAHLACEKGIWGPHLIVVPTS 514
LR+YQ GL+WL + K + ILADEMGLGKTI TI+ L++L + ++GP L+VVP S
Sbjct: 486 LRDYQLEGLNWLAHSWCKNNSVILADEMGLGKTIQTISFLSYLFHQHQLYGPFLVVVPLS 545
Query: 515 VMLNWETEFLKWCPAFKILTYFGSAKERKFKRQ-GWLKPNS----FHVCITTYRLIIQDS 569
+ +W+ EF W P ++ Y G R R+ W+ S F+ ITTY ++++D
Sbjct: 546 TLTSWQREFEVWAPEINVVVYIGDLMSRNMIREYEWIHSQSKRLKFNALITTYEILLKDK 605
Query: 570 KVFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPLQNDLMELWSLMHFL 629
V W +L +DEAH +KN S ++TL++F S R+L+TGTPLQN L ELWSL+HF+
Sbjct: 606 AVLGSISWAFLGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSLLHFI 665
Query: 630 MPHIFQSHQEFKDWFCNPISGMVEGQEKVNKEVVDRLHNVLRPFILRRLKRDVEKQLPMK 689
MP F+ ++F++ + G G + LH VL PF+LRR+K+DVEK LP K
Sbjct: 666 MPEKFEFWEDFEE---DHGKGRENGYQS--------LHKVLEPFLLRRVKKDVEKSLPAK 714
Query: 690 QEHVIYCRLSKRQRNLYEDFIASSE---TQATLASANFFGMISVIMQLRKVCNH 740
E ++ +S Q+ Y+ + + ++ T S + G ++++M+L+K CNH
Sbjct: 715 VEQILRVEMSALQKQYYKWILTRNYKALSKGTRGSTS--GFLNIVMELKKCCNH 766
Score = 403 (146.9 bits), Expect = 1.1e-84, Sum P(4) = 1.1e-84
Identities = 79/151 (52%), Positives = 110/151 (72%)
Query: 996 GKLQELAILLRKLKSDGHRALIFTQMTKMLDILEEFISLYGYTYMRLDGSTQPEERQTLM 1055
GKL L LL +L+ G+R LIF+QM +MLDIL E++++ Y + RLDGS + E R+ +
Sbjct: 793 GKLILLDKLLTRLRDRGNRVLIFSQMVRMLDILAEYLTIKHYPFQRLDGSIKGEIRKQAL 852
Query: 1056 QRFNTN-PKIFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQDRCHRIGQTREV 1114
FN + + F F+LSTR+GG+GINL ADTV+ +DSDWNP D QAQ R HRIGQ ++V
Sbjct: 853 DHFNADGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQV 912
Query: 1115 HIYRLISESTIEENILKKANQKRALDDLVIQ 1145
+IYRL+++ T+EE I+++A +K LD LVIQ
Sbjct: 913 NIYRLVTKGTVEEEIIERAKKKMVLDHLVIQ 943
Score = 57 (25.1 bits), Expect = 1.1e-84, Sum P(4) = 1.1e-84
Identities = 16/45 (35%), Positives = 24/45 (53%)
Query: 1573 PEKLKKGNVWSRDCVPSPDV-WLPQEDAILCAVVHEYG-PNWSLV 1615
PE+ KK + R DV W +ED+ L ++E+G NW L+
Sbjct: 1244 PEERKKYRLTCRVKAAHFDVDWGVEEDSRLLVGIYEHGYGNWELI 1288
Score = 45 (20.9 bits), Expect = 1.1e-84, Sum P(4) = 1.1e-84
Identities = 15/63 (23%), Positives = 24/63 (38%)
Query: 214 EEGHVQGNGNDLLAGSKLDTSGSLVRRCDEINGGLSISENHLLDIETSQVRDTSKKSGAS 273
EEG V N + A + S S + E N + SQ S+ +G+
Sbjct: 10 EEGSVHSNASSHSASEEASGSDSASQSESEQGSEQGSESNSSSESSESQSESESESTGSK 69
Query: 274 TQK 276
+Q+
Sbjct: 70 SQQ 72
Score = 44 (20.5 bits), Expect = 1.4e-84, Sum P(4) = 1.4e-84
Identities = 13/55 (23%), Positives = 23/55 (41%)
Query: 81 DSHKPVQQSPMREQPGIQYKEAD--ENGAEEPGVQSKEADEDDAEQHSGFEPQLD 133
D P +Q+ R + YKE D E +++ + E ++ + E LD
Sbjct: 217 DGETPKRQTRRRAAKNVSYKEDDDFETDSDDLIEMTGEGADEHEDNSETIEKVLD 271
Score = 39 (18.8 bits), Expect = 4.7e-84, Sum P(4) = 4.7e-84
Identities = 21/86 (24%), Positives = 36/86 (41%)
Query: 199 SSAEMGEDEAEPTVVEEGHVQGNGNDLLAGSKLDTSGSLVRRCDEINGGLSISENHLLDI 258
S G D A + E+G QG+ ++ S ++S S E G S++
Sbjct: 24 SEEASGSDSASQSESEQGSEQGSESN----SSSESSESQSESESESTG----SKSQQTPP 75
Query: 259 ETSQVRDTSKKSGASTQKQALYDFSD 284
ET + + SKK + K+ ++ D
Sbjct: 76 ETKE-KPASKKERIADVKKMWEEYPD 100
Score = 38 (18.4 bits), Expect = 7.1e-83, Sum P(5) = 7.1e-83
Identities = 8/32 (25%), Positives = 16/32 (50%)
Query: 259 ETSQVRDTSKKSGASTQKQALYDFSDEQEDGD 290
+TS + + G ++Q + D+ EDG+
Sbjct: 188 KTSVKKPPKLQRGKKRKRQVSSEDDDDDEDGE 219
Score = 38 (18.4 bits), Expect = 7.1e-83, Sum P(5) = 7.1e-83
Identities = 9/33 (27%), Positives = 15/33 (45%)
Query: 94 QPGIQYKEADENGAEEPGVQSKEADEDDAEQHS 126
+ G + A + A E S A + ++EQ S
Sbjct: 10 EEGSVHSNASSHSASEEASGSDSASQSESEQGS 42
Score = 37 (18.1 bits), Expect = 8.8e-46, Sum P(3) = 8.8e-46
Identities = 9/31 (29%), Positives = 16/31 (51%)
Query: 980 RRQVYFPDRRLIQFDCGKLQELAILLRKLKS 1010
RR ++ + +FD KL +L + K +S
Sbjct: 1534 RRNLWIFVSKFTEFDARKLHKLYKMAHKKRS 1564
>ASPGD|ASPL0000056677 [details] [associations]
symbol:AN1024 species:162425 "Emericella nidulans"
[GO:0005575 "cellular_component" evidence=ND] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0006312 "mitotic
recombination" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 EMBL:BN001308 GO:GO:0003677 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
HOGENOM:HOG000172362 EnsemblFungi:CADANIAT00001623 OMA:NNITELW
Uniprot:C8VTY9
Length = 868
Score = 555 (200.4 bits), Expect = 2.8e-84, Sum P(4) = 2.8e-84
Identities = 116/298 (38%), Positives = 182/298 (61%)
Query: 455 LREYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTIAMLAHLACEKGIWGPHLIVVPTS 514
+R+YQ GL+WL +++ L GILADEMGLGKT+ I+++A E + GP LI P S
Sbjct: 202 MRKYQLEGLEWLKSLWMNGLCGILADEMGLGKTVQAISLIAFFK-EHNVSGPFLISAPLS 260
Query: 515 VMLNWETEFLKWCPAFKILTYFGSAKERKFKRQGWL-----KPNSFHVCITTYRLIIQDS 569
+ NW EF +W P K + Y G+ ER R+ ++ K F V T+Y + + D
Sbjct: 261 TVSNWVDEFARWTPGIKTVLYHGTRDERAQLRKKFMNLRDQKSPDFPVVCTSYEICMNDR 320
Query: 570 KVFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPLQNDLMELWSLMHFL 629
K + +W+Y+I+DE H +KN + + LL++NS R+L+TGTPLQN++ ELWSL+HFL
Sbjct: 321 KFLAQYQWRYIIVDEGHRLKNMNCRLIKELLSYNSANRLLITGTPLQNNITELWSLLHFL 380
Query: 630 MPHIFQSHQEFKDWF-CNPI---SGMVEGQEKVNKEVVDRLHNVLRPFILRRLKRDVEKQ 685
+P IF F++WF + + +G + E+ + +V +H++L+PF+LRR+K DVE
Sbjct: 381 LPEIFNDLNSFQNWFDFSSVLDNNGQTDMIERRKRTLVSTMHSILKPFLLRRVKTDVESA 440
Query: 686 LPMKQEHVIYCRLSKRQRNLYEDFIASS-----ETQAT--LASANFFGMISVIMQLRK 736
LP K+E+++Y L+ Q++LY + + + E +AT L + N GMIS L++
Sbjct: 441 LPKKREYILYAPLTLEQKDLYREILNGTGRQYLEEKATERLMAKN--GMISRPRSLKR 496
Score = 380 (138.8 bits), Expect = 2.8e-84, Sum P(4) = 2.8e-84
Identities = 76/157 (48%), Positives = 108/157 (68%)
Query: 996 GKLQELAILLRKLKSDGHRALIFTQMTKMLDILEEFIS-LYGYTYMRLDGSTQPEERQTL 1054
GK+ L L+ L + GH+ LIF+Q LDIL+++ + L + R+DG+ +RQ
Sbjct: 626 GKMLLLDRLIPCLLNKGHKILIFSQFKTQLDILQDWATHLRSWNCCRIDGAISQADRQAQ 685
Query: 1055 MQRFNTNPKIFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQDRCHRIGQTREV 1114
++ FNT+ +F+LSTR+GG GINLV ADTVI +DSDWNP D QAQDR HRIGQT+ V
Sbjct: 686 IKAFNTDKDYKIFLLSTRAGGQGINLVAADTVILFDSDWNPQQDLQAQDRAHRIGQTKPV 745
Query: 1115 HIYRLISESTIEENILKKANQKRALDDLVIQSGGYNT 1151
+YRL ++ T+E+ +L+KA+ KR L+ LVIQ G + +
Sbjct: 746 IVYRLATKGTVEQTLLEKADSKRRLERLVIQKGKFKS 782
Score = 45 (20.9 bits), Expect = 2.8e-84, Sum P(4) = 2.8e-84
Identities = 15/61 (24%), Positives = 28/61 (45%)
Query: 59 KQLEFLLGQTERYSSMLAENLVDSHKPVQQSPMREQPGIQYKEADENGAEEPGVQSKEAD 118
K L LL +E + +++AE + + + ++Q Q KE + +EE S +
Sbjct: 43 KALMHLLNTSEVFVAIMAEKMKKQQEEARLEAAKKQEQ-QQKEQQADTSEESRKASAQPT 101
Query: 119 E 119
E
Sbjct: 102 E 102
Score = 44 (20.5 bits), Expect = 1.8e-49, Sum P(3) = 1.8e-49
Identities = 17/77 (22%), Positives = 34/77 (44%)
Query: 1170 PMKTMQKEKAINNGNEVSLSNA-DVEAALKCVEDEADYMALKRAEQ--EEAVDNQEFTEE 1226
P K+++ + G+ S + K + D L++ EQ EE +D EE
Sbjct: 506 PNKSVRSSRDSTPGSRASSTRRRKAPQTYKDISDREFNSKLRKLEQGLEEDLD----IEE 561
Query: 1227 AVGRPEDDELVIEDTVR 1243
++ E +E+ +T++
Sbjct: 562 SIDESEQEEIERANTIK 578
Score = 39 (18.8 bits), Expect = 2.8e-84, Sum P(4) = 2.8e-84
Identities = 8/18 (44%), Positives = 10/18 (55%)
Query: 727 MISVIMQLRKVCNHPDLF 744
M + +MQ R CN P F
Sbjct: 589 MQNPVMQARLACNSPHNF 606
Score = 38 (18.4 bits), Expect = 1.2e-48, Sum P(4) = 1.2e-48
Identities = 7/20 (35%), Positives = 12/20 (60%)
Query: 1187 SLSNADVEAALKCVEDEADY 1206
++S AD +A +K + DY
Sbjct: 676 AISQADRQAQIKAFNTDKDY 695
Score = 37 (18.1 bits), Expect = 9.7e-49, Sum P(3) = 9.7e-49
Identities = 17/79 (21%), Positives = 37/79 (46%)
Query: 1873 AKLRSVPKSQSLGKHKLSLSDSVKCPKSKLRKTSMEHSEIQHSSPE-----PVSNQSVAT 1927
AK + + +SL K S S SV +K ++S + + +S P + + ++
Sbjct: 483 AKNGMISRPRSL---KRSASSSVVSTPNKSVRSSRDSTPGSRASSTRRRKAPQTYKDISD 539
Query: 1928 KDANLRFDLIQEAWLEDMD 1946
++ N + +++ ED+D
Sbjct: 540 REFNSKLRKLEQGLEEDLD 558
>UNIPROTKB|G3MXX3 [details] [associations]
symbol:CHD2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
InterPro:IPR025260 Pfam:PF13907 GeneTree:ENSGT00560000076896
OMA:AHSWCKN EMBL:DAAA02051958 Ensembl:ENSBTAT00000065179
Uniprot:G3MXX3
Length = 1810
Score = 550 (198.7 bits), Expect = 5.2e-84, Sum P(4) = 5.2e-84
Identities = 117/297 (39%), Positives = 176/297 (59%)
Query: 455 LREYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTIAMLAHLACEKGIWGPHLIVVPTS 514
LR+YQ GL+WL + K + ILADEMGLGKTI TI+ L++L + ++GP LIVVP S
Sbjct: 466 LRDYQLEGLNWLAHSWCKSNSVILADEMGLGKTIQTISFLSYLFHQHQLYGPFLIVVPLS 525
Query: 515 VMLNWETEFLKWCPAFKILTYFGSAKERKFKRQ-GWL----KPNSFHVCITTYRLIIQDS 569
+ +W+ EF W P ++ Y G R R+ W+ K F+ ITTY ++++D
Sbjct: 526 TLTSWQREFEIWAPEINVVVYIGDLMSRNTIREYEWIHSQTKRLKFNALITTYEILLKDK 585
Query: 570 KVFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPLQNDLMELWSLMHFL 629
V W +L +DEAH +KN S ++TL++F S R+L+TGTPLQN L ELWSL+HF+
Sbjct: 586 TVLGSINWAFLGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSLLHFI 645
Query: 630 MPHIFQSHQEFKDWFCNPISGMVEGQEKVNKEVVDRLHNVLRPFILRRLKRDVEKQLPMK 689
MP F+ ++F++ + G G + LH VL PF+LRR+K+DVEK LP K
Sbjct: 646 MPEKFEFWEDFEE---DHGKGRENGYQS--------LHKVLEPFLLRRVKKDVEKSLPAK 694
Query: 690 QEHVIYCRLSKRQRNLYEDFIASS-ETQATLASANFFGMISVIMQLRKVCNHPDLFE 745
E ++ +S Q+ Y+ + + + A + G ++++M+L+K CNH L +
Sbjct: 695 VEQILRVEMSALQKQYYKWILTRNYKALAKGTRGSTSGFLNIVMELKKCCNHCHLIK 751
Score = 403 (146.9 bits), Expect = 5.2e-84, Sum P(4) = 5.2e-84
Identities = 79/151 (52%), Positives = 110/151 (72%)
Query: 996 GKLQELAILLRKLKSDGHRALIFTQMTKMLDILEEFISLYGYTYMRLDGSTQPEERQTLM 1055
GKL L LL +L+ G+R LIF+QM +MLDIL E++++ Y + RLDGS + E R+ +
Sbjct: 773 GKLILLDKLLTRLRERGNRVLIFSQMVRMLDILAEYLTIKHYPFQRLDGSIKGEIRKQAL 832
Query: 1056 QRFNTN-PKIFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQDRCHRIGQTREV 1114
FN + + F F+LSTR+GG+GINL ADTV+ +DSDWNP D QAQ R HRIGQ ++V
Sbjct: 833 DHFNADGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQV 892
Query: 1115 HIYRLISESTIEENILKKANQKRALDDLVIQ 1145
+IYRL+++ T+EE I+++A +K LD LVIQ
Sbjct: 893 NIYRLVTKGTVEEEIIERAKKKMVLDHLVIQ 923
Score = 50 (22.7 bits), Expect = 5.2e-84, Sum P(4) = 5.2e-84
Identities = 19/83 (22%), Positives = 36/83 (43%)
Query: 54 KKALDKQLEFLLGQTERYSSMLAENLVDSHKPVQQSPMREQPGIQYKEAD--ENGAEEPG 111
K + KQ + G+ ++ S E+ D P +Q+ R + YKE D E +++
Sbjct: 167 KPRVKKQPKTQRGKRKKQDSSDDED-EDDEAPKRQTRRRAAKNVSYKEDDDFETDSDDLI 225
Query: 112 VQSKEADEDDAEQHSGFEPQLDA 134
+ E ++ + E LD+
Sbjct: 226 EMTGEGVDEQQDNSETIEKVLDS 248
Score = 50 (22.7 bits), Expect = 5.2e-84, Sum P(4) = 5.2e-84
Identities = 35/152 (23%), Positives = 63/152 (41%)
Query: 1142 LVIQSGGYNTEFFKKLDPMELFSGHRTLPMKTMQKEKAINNGNEVSLSNADVEAAL--KC 1199
L I GY K DP + + LP++T +K + G ++ + AD L K
Sbjct: 1253 LGIYEHGYGNWELIKTDPELKLTDKKILPVETDKKPQ----GKQLQ-TRADYLLKLLRKS 1307
Query: 1200 VEDEADYMALKRAEQEEAVDNQEFTEEAVGRPEDDELVIE-DTVR-TDEPTDQGGCMTAN 1257
+E E A+ E+ + + ++ P DE IE + R +D P+++G
Sbjct: 1308 LEKEG---AVTGGEEAKLTKRKPRVKKENKAPLKDEHGIEFSSPRHSDNPSEEGEV---- 1360
Query: 1258 NDNGMMLTGNDPKEERALTFAAKEDDVDMLAD 1289
D+G+ + K+++ KE + D
Sbjct: 1361 KDDGLEKSPTKKKQKKKENKENKEKQMSSRKD 1392
Score = 37 (18.1 bits), Expect = 1.2e-82, Sum P(4) = 1.2e-82
Identities = 10/38 (26%), Positives = 17/38 (44%)
Query: 199 SSAEMGEDEAEPTVVEEGHVQGNGNDLLAGSKLDTSGS 236
S G D + E+G G+G+ + S ++S S
Sbjct: 5 SEEASGSDSGSQSESEQGSDPGSGHGSESNSSSESSES 42
Score = 37 (18.1 bits), Expect = 7.1e-46, Sum P(3) = 7.1e-46
Identities = 9/31 (29%), Positives = 16/31 (51%)
Query: 980 RRQVYFPDRRLIQFDCGKLQELAILLRKLKS 1010
RR ++ + +FD KL +L + K +S
Sbjct: 1512 RRNLWIFVSKFTEFDARKLHKLYKMAHKKRS 1542
>TAIR|locus:2041644 [details] [associations]
symbol:CHR5 "chromatin remodeling 5" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0003682 "chromatin binding" evidence=ISS] [GO:0004386 "helicase
activity" evidence=IEA;ISS] [GO:0005524 "ATP binding"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA]
[GO:0006333 "chromatin assembly or disassembly" evidence=ISS]
[GO:0009506 "plasmodesma" evidence=IDA] InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0009506 GO:GO:0005524 GO:GO:0005634
EMBL:CP002685 GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR023780 InterPro:IPR025260 Pfam:PF13907 KO:K11367
IPI:IPI00521189 RefSeq:NP_178970.3 UniGene:At.40665 PRIDE:F4IV99
EnsemblPlants:AT2G13370.1 GeneID:815823 KEGG:ath:AT2G13370
OMA:ARNTKSY Uniprot:F4IV99
Length = 1724
Score = 549 (198.3 bits), Expect = 5.3e-84, Sum P(5) = 5.3e-84
Identities = 120/305 (39%), Positives = 181/305 (59%)
Query: 449 FLLKFPLREYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTIAMLAHLACEKGIWGPHL 508
+L+ LR+YQ GL++LV + N ILADEMGLGKT+ +++ML L + I GP L
Sbjct: 619 WLIGGTLRDYQLEGLNFLVNSWLNDTNVILADEMGLGKTVQSVSMLGFLQNTQQIPGPFL 678
Query: 509 IVVPTSVMLNWETEFLKWCPAFKILTYFGSAKERKFKRQGWL-------KPNSFHVCITT 561
+VVP S + NW EF KW P I+ Y G+ R+ +Q +P F+ +TT
Sbjct: 679 VVVPLSTLANWAKEFRKWLPGMNIIVYVGTRASREVCQQYEFYNEKKVGRPIKFNALLTT 738
Query: 562 YRLIIQDSKVFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPLQNDLME 621
Y ++++D V + KW YL++DEAH +KN ++Q + LL F++K ++L+TGTPLQN + E
Sbjct: 739 YEVVLKDKAVLSKIKWIYLMVDEAHRLKNSEAQLYTALLEFSTKNKLLITGTPLQNSVEE 798
Query: 622 LWSLMHFLMPHIFQSHQEFKDWFCNPISGMVEGQEKVNKEVVDRLHNVLRPFILRRLKRD 681
LW+L+HFL P F++ EF + + N +S E E N LH LRP ILRR+ +D
Sbjct: 799 LWALLHFLDPGKFKNKDEFVENYKN-LSSFNES-ELAN------LHLELRPHILRRVIKD 850
Query: 682 VEKQLPMKQEHVIYCRLSKRQRNLYEDFIASSETQATLA-SANFFGMISVIMQLRKVCNH 740
VEK LP K E ++ +S Q+ Y+ + + N +++++++L+K CNH
Sbjct: 851 VEKSLPPKIERILRVEMSPLQKQYYKWILERNFHDLNKGVRGNQVSLLNIVVELKKCCNH 910
Query: 741 PDLFE 745
P LFE
Sbjct: 911 PFLFE 915
Score = 412 (150.1 bits), Expect = 5.3e-84, Sum P(5) = 5.3e-84
Identities = 101/237 (42%), Positives = 134/237 (56%)
Query: 996 GKLQELAILLRKLKSDGHRALIFTQMTKMLDILEEFISLYGYTYMRLDGSTQPEERQTLM 1055
GKL L LL +L+ HR LIF+QM +MLDIL E++SL G+ + RLDGST+ E RQ M
Sbjct: 939 GKLVILDKLLVRLRETKHRVLIFSQMVRMLDILAEYLSLRGFQFQRLDGSTKAELRQQAM 998
Query: 1056 QRFNTNPKI-FLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQDRCHRIGQTREV 1114
FN F F+LSTR+GG+GINL ADTV+ +DSDWNP D QA R HRIGQ V
Sbjct: 999 DHFNAPASDDFCFLLSTRAGGLGINLATADTVVIFDSDWNPQNDLQAMSRAHRIGQQEVV 1058
Query: 1115 HIYRLISESTIEENILKKANQKRALDDLVIQSGGYNTEFFKKLDPMELFSGHRTLPMKTM 1174
+IYR ++ ++EE IL++A +K LD LVIQ N E +L+ E G
Sbjct: 1059 NIYRFVTSKSVEEEILERAKRKMVLDHLVIQK--LNAE--GRLEKRETKKGSN---FDKN 1111
Query: 1175 QKEKAINNGNEVSLSNA--DVEAALKCVEDEADYMALKRAEQEEAVDNQEFTEEAVG 1229
+ + G E D E+ + + + D + L+RAEQ E E E +G
Sbjct: 1112 ELSAILRFGAEELFKEDKNDEESKKRLLSMDIDEI-LERAEQVEEKHTDETEHELLG 1167
Score = 61 (26.5 bits), Expect = 5.3e-84, Sum P(5) = 5.3e-84
Identities = 18/42 (42%), Positives = 24/42 (57%)
Query: 97 IQYKEA--DENGAEEPGVQSKEADEDDAEQHSGFEPQLDAAD 136
I Y ++ D NG + + +E DEDD E + FEP DAAD
Sbjct: 226 IHYSDSNHDHNGDADMDYEEEE-DEDDPED-ADFEPY-DAAD 264
Score = 42 (19.8 bits), Expect = 6.8e-83, Sum P(4) = 6.8e-83
Identities = 10/38 (26%), Positives = 19/38 (50%)
Query: 99 YKEADENGAEEPGVQSKEADEDDAEQHSGFEPQLDAAD 136
Y AD+ GA + Q + ++D E + ++D +D
Sbjct: 260 YDAADDGGASKKHGQGWDVSDEDPES----DEEIDLSD 293
Score = 40 (19.1 bits), Expect = 5.3e-84, Sum P(5) = 5.3e-84
Identities = 9/26 (34%), Positives = 13/26 (50%)
Query: 265 DTSKKSGASTQKQALYDFSDEQEDGD 290
D + GAS + +D SDE + D
Sbjct: 261 DAADDGGASKKHGQGWDVSDEDPESD 286
Score = 40 (19.1 bits), Expect = 2.3e-46, Sum P(4) = 2.3e-46
Identities = 12/26 (46%), Positives = 15/26 (57%)
Query: 1155 KKLDPMELFSGHRT-LPMKTMQKEKA 1179
KK+ P+EL H T LP KE+A
Sbjct: 1421 KKIAPVEL-QHHETFLPRAPNLKERA 1445
Score = 38 (18.4 bits), Expect = 5.3e-84, Sum P(5) = 5.3e-84
Identities = 7/20 (35%), Positives = 13/20 (65%)
Query: 1469 TFSDAMSPPSTSQKKRKKAE 1488
++ D P TS++K+K +E
Sbjct: 1210 SYVDPSHPDRTSKRKKKGSE 1229
Score = 38 (18.4 bits), Expect = 1.8e-82, Sum P(4) = 1.8e-82
Identities = 12/29 (41%), Positives = 18/29 (62%)
Query: 55 KALDKQLEFLLGQTERYSSMLAEN-LVDS 82
+ LD+Q E+L+G T R + N LV+S
Sbjct: 611 RKLDEQPEWLIGGTLRDYQLEGLNFLVNS 639
Score = 38 (18.4 bits), Expect = 2.9e-45, Sum P(5) = 2.9e-45
Identities = 10/17 (58%), Positives = 11/17 (64%)
Query: 1183 GNEVSLSNADVEAALKC 1199
GN+VSL N VE KC
Sbjct: 892 GNQVSLLNIVVELK-KC 907
Score = 37 (18.1 bits), Expect = 2.3e-82, Sum P(4) = 2.3e-82
Identities = 21/77 (27%), Positives = 32/77 (41%)
Query: 60 QLEFLL---GQTERYSSMLA----ENLVDSHKPVQQSPMREQPGIQYKEADENGAEEPGV 112
++EFL+ GQ+ + +NL K V + I+Y+ A E
Sbjct: 461 EMEFLIKWKGQSHLHCQWKTLSDLQNL-SGFKKVLNYTKKVTEEIRYRTALSREEIEVND 519
Query: 113 QSKEADEDDAEQHSGFE 129
SKE D D +Q+S E
Sbjct: 520 VSKEMDLDIIKQNSQVE 536
Score = 37 (18.1 bits), Expect = 1.7e-30, Sum P(5) = 1.7e-30
Identities = 14/45 (31%), Positives = 21/45 (46%)
Query: 790 LDFSMNSWESDELNAIATPASLIKERAD------LNNLEEV-GPF 827
L+F +NSW +D +A L K L N +++ GPF
Sbjct: 633 LNFLVNSWLNDTNVILADEMGLGKTVQSVSMLGFLQNTQQIPGPF 677
>UNIPROTKB|F6XTU7 [details] [associations]
symbol:SMARCA1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005634 "nucleus" evidence=IEA]
[GO:0043044 "ATP-dependent chromatin remodeling" evidence=IEA]
[GO:0031491 "nucleosome binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR009057 InterPro:IPR015194 InterPro:IPR015195
InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271 Pfam:PF09110
Pfam:PF09111 Pfam:PF13892 PROSITE:PS51194 SMART:SM00490
SMART:SM00717 GO:GO:0005524 GO:GO:0003677 Gene3D:1.10.10.60
SUPFAM:SSF46689 InterPro:IPR017884 PROSITE:PS51293 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0016585
GO:GO:0031491 GO:GO:0043044 GeneTree:ENSGT00680000100002
SUPFAM:SSF101224 OMA:PMSQKRK EMBL:AAEX03026896
Ensembl:ENSCAFT00000029649 Uniprot:F6XTU7
Length = 1075
Score = 636 (228.9 bits), Expect = 8.3e-84, Sum P(3) = 8.3e-84
Identities = 126/288 (43%), Positives = 186/288 (64%)
Query: 454 PLREYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTIAMLAHLACEKGIWGPHLIVVPT 513
PLR+YQ GL+WL+++YE +NGILADEMGLGKT+ TIA+L +L + I GPH+++VP
Sbjct: 182 PLRDYQIRGLNWLISLYENGVNGILADEMGLGKTLQTIALLGYLKHYRNIPGPHMVLVPK 241
Query: 514 SVMLNWETEFLKWCPAFKILTYFGSAKERKFKRQGWLKPNSFHVCITTYRLIIQDSKVFK 573
S + NW EF +W P+ +++ + G R + + P + VC+T+Y ++I++ VFK
Sbjct: 242 STLYNWMNEFKRWVPSLRVICFVGDKDARAAFIRDEMMPGEWDVCVTSYEMVIKEKSVFK 301
Query: 574 RKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPLQNDLMELWSLMHFLMPHI 633
+ W+YL++DEAH IKN KS+ + + F S R+LLTGTPLQN+L ELW+L++FL+P +
Sbjct: 302 KFHWRYLVIDEAHRIKNEKSKLSEIVREFKSTNRLLLTGTPLQNNLHELWALLNFLLPDV 361
Query: 634 FQSHQEFKDWFCNPISGMVEGQEKVNKEVVDRLHNVLRPFILRRLKRDVEKQLPMKQEHV 693
F S +F WF + G +K+ V+RLH VL+PF+LRR+K DVEK LP K+E
Sbjct: 362 FNSADDFDSWF--DTKNCL-GDQKL----VERLHAVLKPFLLRRIKTDVEKSLPPKKEIK 414
Query: 694 IYCRLSKRQRNLYEDFIASSETQATLASANF-FGMISVIMQLR--KVC 738
+Y LSK QR + + ++ N +++VIM LR K C
Sbjct: 415 VYLGLSKMQREWFVILAFFISENSNNSNKNHKLDILNVIMLLREAKCC 462
Score = 280 (103.6 bits), Expect = 8.3e-84, Sum P(3) = 8.3e-84
Identities = 55/113 (48%), Positives = 77/113 (68%)
Query: 1051 RQTLMQRFNT-NPKIFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQDRCHRIG 1109
++ ++ FN N F+F+LSTR+GG+GINL AD VI YDSDWNP +D QA DR HRIG
Sbjct: 558 KKEAIEAFNAPNSSKFIFMLSTRAGGLGINLASADVVILYDSDWNPQVDLQAMDRAHRIG 617
Query: 1110 QTREVHIYRLISESTIEENILKKANQKRALDDLVIQSGGYNTEFFKKLDPMEL 1162
Q + V ++RLI+++T+EE I+++A K LD +VIQ G + KL E+
Sbjct: 618 QKKPVRVFRLITDNTVEERIVERAEIKLRLDSIVIQQGRLIDQQSNKLAKEEM 670
Score = 62 (26.9 bits), Expect = 8.3e-84, Sum P(3) = 8.3e-84
Identities = 25/102 (24%), Positives = 50/102 (49%)
Query: 28 KDVKKFWMKIE-KLVLYKHQMEVDVRKKKALD--KQLEFLLGQTERYSSMLAENLVDSHK 84
K+V F +K+ K + +M+ + +K D K+ EFLL QTE ++ + + S
Sbjct: 59 KNVSSFQLKLAAKASKSEKEMDPEYEEKMKADRAKRFEFLLKQTELFAHFIQPSAQKS-- 116
Query: 85 PVQQSPMREQPGI-QYKEADENGAEEPG-VQSKEADEDDAEQ 124
P SP+ + G + K+ D+ G + + ++++ E+
Sbjct: 117 PT--SPLNMKLGRPRIKKDDKQSLISAGDYRHRRTEQEEDEE 156
>TAIR|locus:2062840 [details] [associations]
symbol:SYD "SPLAYED" species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0009908 "flower development"
evidence=IMP] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0003682 "chromatin binding" evidence=IPI] [GO:0010199 "organ
boundary specification between lateral organs and the meristem"
evidence=IGI] [GO:0043044 "ATP-dependent chromatin remodeling"
evidence=NAS] [GO:0040029 "regulation of gene expression,
epigenetic" evidence=RCA;IMP] [GO:0009611 "response to wounding"
evidence=IEP] [GO:0005829 "cytosol" evidence=IDA] [GO:0000226
"microtubule cytoskeleton organization" evidence=RCA] [GO:0000911
"cytokinesis by cell plate formation" evidence=RCA] [GO:0006306
"DNA methylation" evidence=RCA] [GO:0006342 "chromatin silencing"
evidence=RCA] [GO:0007267 "cell-cell signaling" evidence=RCA]
[GO:0009616 "virus induced gene silencing" evidence=RCA]
[GO:0009640 "photomorphogenesis" evidence=RCA] [GO:0009793 "embryo
development ending in seed dormancy" evidence=RCA] [GO:0009845
"seed germination" evidence=RCA] [GO:0009909 "regulation of flower
development" evidence=RCA] [GO:0009933 "meristem structural
organization" evidence=RCA] [GO:0010162 "seed dormancy process"
evidence=RCA] [GO:0010182 "sugar mediated signaling pathway"
evidence=RCA] [GO:0010228 "vegetative to reproductive phase
transition of meristem" evidence=RCA] [GO:0010267 "production of
ta-siRNAs involved in RNA interference" evidence=RCA] [GO:0016567
"protein ubiquitination" evidence=RCA] [GO:0019915 "lipid storage"
evidence=RCA] [GO:0035196 "production of miRNAs involved in gene
silencing by miRNA" evidence=RCA] [GO:0050826 "response to
freezing" evidence=RCA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 SMART:SM00951 GO:GO:0005829 GO:GO:0005524
GO:GO:0005634 EMBL:CP002685 GO:GO:0009611 GO:GO:0006355
GO:GO:0003677 GO:GO:0003682 GO:GO:0016887 GO:GO:0004386
GO:GO:0009908 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0043044 GO:GO:0010199 GO:GO:0040029 InterPro:IPR014012
PROSITE:PS51204 IPI:IPI00516285 RefSeq:NP_850116.1 UniGene:At.22414
PRIDE:F4IHS2 EnsemblPlants:AT2G28290.1 GeneID:817375
KEGG:ath:AT2G28290 OMA:SDLYAIS Uniprot:F4IHS2
Length = 3574
Score = 589 (212.4 bits), Expect = 1.4e-83, Sum P(8) = 1.4e-83
Identities = 125/300 (41%), Positives = 179/300 (59%)
Query: 455 LREYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTIAMLAHLACEKGIWGPHLIVVPTS 514
LREYQ GL WLV++Y LNGILADEMGLGKT+ I+++ +L K GP L+VVP+S
Sbjct: 754 LREYQMNGLRWLVSLYNNHLNGILADEMGLGKTVQVISLICYLMETKNDRGPFLVVVPSS 813
Query: 515 VMLNWETEFLKWCPAFKILTYFGSAKERK--FKRQGWLKPNSFHVCITTYRLIIQ--DSK 570
V+ W++E W P+ + Y G+ ER+ FK Q + F+V +TTY ++ D
Sbjct: 814 VLPGWQSEINFWAPSIHKIVYCGTPDERRKLFKEQ--IVHQKFNVLLTTYEYLMNKHDRP 871
Query: 571 VFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPLQNDLMELWSLMHFLM 630
+ W Y+I+DE H IKN + L ++ S R+LLTGTPLQN+L ELW+L++FL+
Sbjct: 872 KLSKIHWHYIIIDEGHRIKNASCKLNADLKHYVSSHRLLLTGTPLQNNLEELWALLNFLL 931
Query: 631 PHIFQSHQEFKDWFCNPISGMVEGQ-------EKVNKEVVDRLHNVLRPFILRRLKRDVE 683
P+IF S ++F WF P E E+ N +++RLH VLRPF+LRRLK VE
Sbjct: 932 PNIFNSSEDFSQWFNKPFQSNGESSAEEALLSEEENLLIINRLHQVLRPFVLRRLKHKVE 991
Query: 684 KQLPMKQEHVIYCRLSKRQRNLYEDFIASSETQATLASANFFGMISVIMQLRKVCNHPDL 743
+LP K E +I C S Q+ L + + ++ +A + + +M+LR +CNHP L
Sbjct: 992 NELPEKIERLIRCEASAYQKLLMKRV---EDNLGSIGNAKSRAVHNSVMELRNICNHPYL 1048
Score = 370 (135.3 bits), Expect = 1.4e-83, Sum P(8) = 1.4e-83
Identities = 70/157 (44%), Positives = 106/157 (67%)
Query: 995 CGKLQELAILLRKLKSDGHRALIFTQMTKMLDILEEFISLYGYTYMRLDGSTQPEERQTL 1054
CGKL+ L +L KLK+ HR L F+ MT++LD++E++++L GY Y+RLDG T +R L
Sbjct: 1072 CGKLEMLDRMLPKLKATDHRVLFFSTMTRLLDVMEDYLTLKGYKYLRLDGQTSGGDRGAL 1131
Query: 1055 MQRFN-TNPKIFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQDRCHRIGQTRE 1113
+ FN + F+F+LS R+GGVG+NL ADTVI +D+DWNP +D QAQ R HRIGQ ++
Sbjct: 1132 IDGFNKSGSPFFIFLLSIRAGGVGVNLQAADTVILFDTDWNPQVDLQAQARAHRIGQKKD 1191
Query: 1114 VHIYRLISESTIEENILKKANQKRALDDLVIQSGGYN 1150
V + R + +++EE + A K + + I +G ++
Sbjct: 1192 VLVLRFETVNSVEEQVRASAEHKLGVANQSITAGFFD 1228
Score = 72 (30.4 bits), Expect = 9.3e-50, Sum P(4) = 9.3e-50
Identities = 43/181 (23%), Positives = 78/181 (43%)
Query: 1059 NTNPKIFLFILSTRSGGVGINLVGA---DTVIFYDSDWNPAMDQQAQDRCHRIGQTREVH 1115
+T P+I L + G+ I+L A +TV+ S+ P+ +D + GQ EV
Sbjct: 3396 STEPQIQLSSSAEPEEGMHIHLEAAMNSETVVTEGSEL-PSSLPMTEDE-NADGQLAEVE 3453
Query: 1116 IYRLISESTIEENILKKANQKRALDDLVIQSGGYNTEFFKKLDPMELFSGHRTLPMKTMQ 1175
+S + + NI +K + + A +LV S G +++ K P G + ++T+
Sbjct: 3454 --PSVSLTVEQTNIEEKDHIETAECELVDVSPGCSSQPEVKFPPSPDAVGGMDVHLETVV 3511
Query: 1176 KEKAINNGNEVSLSNADVEAALKCVEDEADYMALKRAEQEEAVDNQEFTEEA-VGRPEDD 1234
E +N + D E ++ E+D + E N EE+ + P+D+
Sbjct: 3512 TEDTDSNSSLPKTEEKDAENPSDRLDGESDGTTVATVEGTCVESNSLVAEESNIEVPKDN 3571
Query: 1235 E 1235
E
Sbjct: 3572 E 3572
Score = 68 (29.0 bits), Expect = 1.4e-83, Sum P(8) = 1.4e-83
Identities = 14/46 (30%), Positives = 25/46 (54%)
Query: 1654 PDNSINEKTSNVGSGKALLKVTEDNVRTLLNVAAEQEDNELLLQKH 1699
P+ S++++ VGS ++ T D + L+ + E E+ E LQ H
Sbjct: 2256 PEESVSDQRPKVGSAYTQMEDT-DEAKLLMGCSVESEEKEKTLQSH 2300
Score = 54 (24.1 bits), Expect = 1.4e-83, Sum P(8) = 1.4e-83
Identities = 11/21 (52%), Positives = 16/21 (76%)
Query: 1770 DANSRQQ-DDKVSNFDRREDG 1789
DA++ Q ++ VSNFDR +DG
Sbjct: 2423 DADTEQNPEESVSNFDRPKDG 2443
Score = 54 (24.1 bits), Expect = 3.7e-82, Sum P(8) = 3.7e-82
Identities = 14/49 (28%), Positives = 25/49 (51%)
Query: 1654 PDNSINEKTSN---VGSGKALLKVTEDNVRTLLNVAAEQEDNELLLQKH 1699
P+ S++ + N VG+ ++ T D + L+ + E E+ E LQ H
Sbjct: 2371 PEESVSVQGVNRPKVGNANTQMEDT-DEAKVLVGCSVESEEKEKTLQSH 2418
Score = 51 (23.0 bits), Expect = 1.4e-83, Sum P(8) = 1.4e-83
Identities = 22/79 (27%), Positives = 33/79 (41%)
Query: 1170 PMKTMQKEKAINNGNEVSLSNADV-EAALKCVEDEADYMALKRAEQEEA-VDNQEFTEEA 1227
P+ T + EK I+ +EV N D EA L E++ + + EE +
Sbjct: 2059 PLPTDKLEKNISFQDEVKTLNGDKREAILLSSEEQTNVNSKIETNSEELQASRTDEVPHV 2118
Query: 1228 VGRPEDDELVIEDTVRTDE 1246
G+ D V TV+ DE
Sbjct: 2119 DGKSVD---VANQTVKEDE 2134
Score = 50 (22.7 bits), Expect = 1.4e-83, Sum P(8) = 1.4e-83
Identities = 39/147 (26%), Positives = 62/147 (42%)
Query: 1805 LVDS--TISFP-PRVNLSVYGSDLETSVNKST-RENHHLKDS---QVAENRFRDAARAC- 1856
LVD T F P V+L +D+E S++ S ++N KD + A + D + C
Sbjct: 2928 LVDQMDTEEFKNPDVSLHQL-ADIEPSLSISAVQKNIEDKDQSHVETAGSELVDVSAECS 2986
Query: 1857 IEDSLGWASSAFPANDAKLRSVPKSQSLGKHKLSLSDSVKCPKSKLRKTSMEHSEIQHSS 1916
E + S+ P D + LG K + S L KT E+++ Q +
Sbjct: 2987 TEPQVQLPPSSEPVGDMHVH-------LGASKSEIVAEGTDFSSSLPKTEEENAKSQLAD 3039
Query: 1917 PEPVSNQSVATKDANLRFDLIQEAWLE 1943
EP S+ + K N+ D ++ A E
Sbjct: 3040 TEPSSSLTAVQK--NIE-DQVETAGCE 3063
Score = 48 (22.0 bits), Expect = 7.9e-82, Sum P(4) = 7.9e-82
Identities = 19/87 (21%), Positives = 33/87 (37%)
Query: 1883 SLGKHKLSLSDSVKCPKSKLRKTSMEHSEIQHSSPEPVSNQSVATKDANLRFDLIQEAWL 1942
S K ++D + K +TS+ ++ S +N A + ++
Sbjct: 1861 SARKQTADVTDVARVMKEIFSETSLLKHKVGEPSATTRTNVPDAQSPGEMNLHTVETHKA 1920
Query: 1943 EDMDGGRLSCMDQDLSLETVLSSEIPH 1969
ED G + +LS L S+IPH
Sbjct: 1921 EDSSGLKNQEALYNLSKADKLVSDIPH 1947
Score = 47 (21.6 bits), Expect = 2.8e-83, Sum P(8) = 2.8e-83
Identities = 19/89 (21%), Positives = 38/89 (42%)
Query: 1822 GSDLETSVNKSTRENHHLKDSQVAENRFRDAARACIEDSLGWASSAFPANDAKLRSVPKS 1881
G+D +S+ K+ EN + + + A + IED + A F + P+
Sbjct: 3018 GTDFSSSLPKTEEENAKSQLADTEPSSSLTAVQKNIEDQVETAGCEFVVVSTGCSTEPQV 3077
Query: 1882 QSLGKHKLSLSDSVKCPKSKLRKTSMEHS 1910
Q + +++ + P S L T +++S
Sbjct: 3078 QLPPSAEPVVAEGTEFPSSLLM-TGVDNS 3105
Score = 45 (20.9 bits), Expect = 1.6e-81, Sum P(4) = 1.6e-81
Identities = 13/59 (22%), Positives = 26/59 (44%)
Query: 1203 EADYMALKRAEQEEAVDNQEFTEEAVGRPEDDELVIEDTVRTDEPTDQGGCMTANNDNG 1261
E +M L+ ++ E V + + A P +V++ + + + GGC N +G
Sbjct: 3338 EGTHMHLEETKKSETVVTE--IQLADIDPSFSLIVVQTNIEDQDQIETGGCDLINVPSG 3394
Score = 44 (20.5 bits), Expect = 5.6e-83, Sum P(8) = 5.6e-83
Identities = 30/127 (23%), Positives = 52/127 (40%)
Query: 1808 STISFPPRVNLSVYGSDLETSVNKSTRE-NHHLKDS-QVAENRFRDAARACI-EDSLGWA 1864
+T+ N +++E S + S E N +D QV + C E +
Sbjct: 3180 ATLPLTEEENADSQLANIEPSSSPSVVEKNIEAQDQDQVKTAGCELVSTGCSSEPQVHLP 3239
Query: 1865 SSAFPAND--AKLRSVPKSQSLGKHKLSLSDSVKCPKSKLRKTSMEHSEIQHSSPEPVSN 1922
SA P D L+ KS+S+ + + + P S L T ++E Q + EP ++
Sbjct: 3240 PSAEPDGDIHVHLKETEKSESM----VVVGEGTAFPSS-LPVTEEGNAESQLADTEPFTS 3294
Query: 1923 QSVATKD 1929
+V K+
Sbjct: 3295 PTVVEKN 3301
Score = 43 (20.2 bits), Expect = 1.5e-83, Sum P(7) = 1.5e-83
Identities = 14/43 (32%), Positives = 23/43 (53%)
Query: 1202 DEADYMAL-KRAEQEEAVDNQEFTEEAVGRPE--DDELVIEDT 1241
D+ DY + K A+ E+ + F + VGRP+ + +EDT
Sbjct: 2180 DDKDYDPISKSADIEQDPEESVFVQ-GVGRPKVGTADTQMEDT 2221
Score = 43 (20.2 bits), Expect = 3.0e-80, Sum P(7) = 3.0e-80
Identities = 8/23 (34%), Positives = 13/23 (56%)
Query: 1677 DNVRTLLNVAAEQEDNELLLQKH 1699
D+ + L+ + E E+ E LQ H
Sbjct: 2453 DDAKLLVGCSVESEEKEKSLQSH 2475
Score = 42 (19.8 bits), Expect = 5.7e-81, Sum P(5) = 5.7e-81
Identities = 22/74 (29%), Positives = 34/74 (45%)
Query: 1176 KEKAINNGNEVSLSN-ADVEAALKCVEDEADYMALKRAEQEEAVDNQEFTEEAVGRPEDD 1234
KE I + +VSL AD++A + D+ D K E A + + A +P
Sbjct: 2802 KEPGIESA-DVSLHQLADIQAEPSNLVDQMDIEESKEPGTESA--DVSLHQLADIQPGPS 2858
Query: 1235 ELVIE-DTVRTDEP 1247
LV + DT ++ EP
Sbjct: 2859 ILVDQMDTEKSKEP 2872
Score = 40 (19.1 bits), Expect = 1.4e-83, Sum P(8) = 1.4e-83
Identities = 23/106 (21%), Positives = 45/106 (42%)
Query: 184 QELLKRYAVDKVGRESSAEMGEDEAEPTVVEEGHVQGNGNDLLAGSKLDTSGSLVRRCDE 243
+E L R +DK+ RE + ++ E G+++ ++ +K D L++ ++
Sbjct: 626 KERLHREKIDKIQREKINLLKINDVE------GYLR-----MVQDAKSDRVKQLLKETEK 674
Query: 244 I--NGGLSISENHLLDIETSQVRDTSKKSGASTQKQALYDFSDEQE 287
G + E LL D ++ S A T + L + DE +
Sbjct: 675 YLQKLGSKLKEAKLLTSRFENEADETRTSNA-TDDETLIENEDESD 719
Score = 39 (18.8 bits), Expect = 1.4e-83, Sum P(8) = 1.4e-83
Identities = 9/24 (37%), Positives = 12/24 (50%)
Query: 1457 MSIDDDFYDEDATFSDAMSPPSTS 1480
MS+DD YD + +D P S
Sbjct: 2177 MSLDDKDYDPISKSADIEQDPEES 2200
Score = 39 (18.8 bits), Expect = 1.7e-83, Sum P(8) = 1.7e-83
Identities = 14/47 (29%), Positives = 26/47 (55%)
Query: 38 EKLVLYK-HQMEVDVRK-KKALDKQLEFLLGQTERYSSMLAENLVDS 82
EK+ L K + +E +R + A +++ LL +TE+Y L L ++
Sbjct: 640 EKINLLKINDVEGYLRMVQDAKSDRVKQLLKETEKYLQKLGSKLKEA 686
Score = 39 (18.8 bits), Expect = 1.2e-80, Sum P(5) = 1.2e-80
Identities = 9/40 (22%), Positives = 18/40 (45%)
Query: 1212 AEQEEAVDNQEFTEEAVGRPEDDELVIEDTVRTDEPTDQG 1251
++ EE ++ G+P+D DT++ + D G
Sbjct: 2682 SQSEEIQSPSILPDDVPGQPDDGNCEKMDTMQNNTSIDIG 2721
Score = 38 (18.4 bits), Expect = 8.7e-81, Sum P(4) = 8.7e-81
Identities = 7/31 (22%), Positives = 13/31 (41%)
Query: 1231 PEDDELVIEDTVRTDEPTDQGGCMTANNDNG 1261
P V+E ++ E + GC ++ G
Sbjct: 3291 PFTSPTVVEKNIKDQEQVETTGCGLVDDSTG 3321
Score = 38 (18.4 bits), Expect = 9.3e-50, Sum P(4) = 9.3e-50
Identities = 9/34 (26%), Positives = 18/34 (52%)
Query: 1038 TYMRLDGSTQPEERQTLMQRFNTNPKIFLFILST 1071
T+M L+ + + E T +Q + +P L ++ T
Sbjct: 3340 THMHLEETKKSETVVTEIQLADIDPSFSLIVVQT 3373
>UNIPROTKB|J9NX79 [details] [associations]
symbol:CHD2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
InterPro:IPR025260 Pfam:PF13907 GeneTree:ENSGT00560000076896
EMBL:AAEX03002279 EMBL:AAEX03002280 Ensembl:ENSCAFT00000044612
Uniprot:J9NX79
Length = 1689
Score = 548 (198.0 bits), Expect = 2.4e-83, Sum P(5) = 2.4e-83
Identities = 116/292 (39%), Positives = 174/292 (59%)
Query: 455 LREYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTIAMLAHLACEKGIWGPHLIVVPTS 514
LR+YQ GL+WL + K + ILADEMGLGKTI TI+ L++L + ++GP LIVVP S
Sbjct: 453 LRDYQLEGLNWLAHSWCKSNSVILADEMGLGKTIQTISFLSYLFHQHQLYGPFLIVVPLS 512
Query: 515 VMLNWETEFLKWCPAFKILTYFGSAKERKFKRQ-GWL----KPNSFHVCITTYRLIIQDS 569
+ +W+ EF W P ++ Y G R R+ W+ K F+ ITTY ++++D
Sbjct: 513 TLTSWQREFEIWAPEINVVVYIGDLMSRNTIREYEWIHSQTKRLKFNALITTYEILLKDK 572
Query: 570 KVFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPLQNDLMELWSLMHFL 629
V W +L +DEAH +KN S ++TL++F S R+L+TGTPLQN L ELWSL+HF+
Sbjct: 573 TVLGSINWAFLGVDEAHRLKNDDSLLYKTLIDFKSHHRLLITGTPLQNSLKELWSLLHFI 632
Query: 630 MPHIFQSHQEFKDWFCNPISGMVEGQEKVNKEVVDRLHNVLRPFILRRLKRDVEKQLPMK 689
MP F+ ++F++ + G G + LH VL PF+LRR+K+DVEK LP K
Sbjct: 633 MPEKFEFWEDFEE---DHGKGRENGYQS--------LHKVLEPFLLRRVKKDVEKSLPAK 681
Query: 690 QEHVIYCRLSKRQRNLYEDFIASS-ETQATLASANFFGMISVIMQLRKVCNH 740
E ++ +S Q+ Y+ + + + A + G ++++M+L+K CNH
Sbjct: 682 VEQILRVEMSALQKQYYKWILTRNYKALAKGTRGSTSGFLNIVMELKKCCNH 733
Score = 403 (146.9 bits), Expect = 2.4e-83, Sum P(5) = 2.4e-83
Identities = 79/151 (52%), Positives = 110/151 (72%)
Query: 996 GKLQELAILLRKLKSDGHRALIFTQMTKMLDILEEFISLYGYTYMRLDGSTQPEERQTLM 1055
GKL L LL +L+ G+R LIF+QM +MLDIL E++++ Y + RLDGS + E R+ +
Sbjct: 760 GKLILLDKLLTRLRERGNRVLIFSQMVRMLDILAEYLTIKHYPFQRLDGSIKGEIRKQAL 819
Query: 1056 QRFNTN-PKIFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQDRCHRIGQTREV 1114
FN + + F F+LSTR+GG+GINL ADTV+ +DSDWNP D QAQ R HRIGQ ++V
Sbjct: 820 DHFNADGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQV 879
Query: 1115 HIYRLISESTIEENILKKANQKRALDDLVIQ 1145
+IYRL+++ T+EE I+++A +K LD LVIQ
Sbjct: 880 NIYRLVTKGTVEEEIIERAKKKMVLDHLVIQ 910
Score = 53 (23.7 bits), Expect = 2.4e-83, Sum P(5) = 2.4e-83
Identities = 30/117 (25%), Positives = 54/117 (46%)
Query: 1571 IKPEKLKKGNVWSRDCVPSPDV-WLPQEDAILCAVVHEYG-PNWSLV-SDILYGMTASGY 1627
+ PE+ KK + R DV W ++D+ L ++E+G NW L+ +D +T
Sbjct: 1207 VDPEEKKKYCLTCRVKAAHFDVEWGVEDDSRLLLGIYEHGYGNWELIKTDPELKLTDKKI 1266
Query: 1628 YRGRYRHPVHCCER--FRELIQR--YILSVPDNSINEKTSNVGSGKALLKVTEDNVR 1680
PV ++ ++L R Y+L + S+ +K + G +A LK + V+
Sbjct: 1267 L------PVETDKKPQGKQLQTRADYLLKLLRKSLEKKGAVTGGEEAKLKKRKPRVK 1317
Score = 51 (23.0 bits), Expect = 2.4e-83, Sum P(5) = 2.4e-83
Identities = 19/83 (22%), Positives = 36/83 (43%)
Query: 54 KKALDKQLEFLLGQTERYSSMLAENLVDSHKPVQQSPMREQPGIQYKEAD--ENGAEEPG 111
K + KQ + G+ +R S ++ D P +Q+ R + YKE D E +++
Sbjct: 172 KPRVKKQPKTQRGKRKRQDSSDDDD-EDDEAPKRQTRRRAAKNVSYKEDDDFETDSDDLI 230
Query: 112 VQSKEADEDDAEQHSGFEPQLDA 134
+ E ++ + E LD+
Sbjct: 231 EMTGEGADEQQDNSETIEKVLDS 253
Score = 39 (18.8 bits), Expect = 5.6e-81, Sum P(6) = 5.6e-81
Identities = 8/23 (34%), Positives = 13/23 (56%)
Query: 1207 MALKRAEQEEAVDNQEFTEEAVG 1229
MA K+ QEE Q+ ++ +G
Sbjct: 1525 MAHKKRSQEEESQEQKKKDDVIG 1547
Score = 38 (18.4 bits), Expect = 2.4e-83, Sum P(5) = 2.4e-83
Identities = 8/21 (38%), Positives = 10/21 (47%)
Query: 1835 ENHHLKDSQVAENRFRDAARA 1855
E H KD + R DA R+
Sbjct: 1638 EQHWYKDHHYGDRRHMDAHRS 1658
Score = 38 (18.4 bits), Expect = 8.7e-82, Sum P(5) = 8.7e-82
Identities = 26/113 (23%), Positives = 49/113 (43%)
Query: 1142 LVIQSGGYNTEFFKKLDPMELFSGHRTLPMKTMQKEKAINNGNEVSLSNADVEAAL--KC 1199
L I GY K DP + + LP++T +K + G ++ + AD L K
Sbjct: 1240 LGIYEHGYGNWELIKTDPELKLTDKKILPVETDKKPQ----GKQLQ-TRADYLLKLLRKS 1294
Query: 1200 VEDEADYMALKRAEQEEAVDNQEFTEEAVGRPEDDELVIEDTVR-TDEPTDQG 1251
+E + + A+ ++ + E R +D+ V + R +D P+++G
Sbjct: 1295 LEKKGAVTGGEEAKLKKRKPRVK-KENKEPRLKDEHGVEFSSPRHSDNPSEEG 1346
Score = 37 (18.1 bits), Expect = 6.8e-82, Sum P(5) = 6.8e-82
Identities = 10/38 (26%), Positives = 17/38 (44%)
Query: 199 SSAEMGEDEAEPTVVEEGHVQGNGNDLLAGSKLDTSGS 236
S G D + E+G G+G+ + S ++S S
Sbjct: 5 SEEASGSDSGSQSESEQGSDPGSGHGSESNSSSESSES 42
Score = 37 (18.1 bits), Expect = 5.6e-81, Sum P(6) = 5.6e-81
Identities = 8/21 (38%), Positives = 11/21 (52%)
Query: 1170 PMKTMQKEKAINNGNEVSLSN 1190
PMK QK+K E +S+
Sbjct: 1357 PMKKKQKKKENKENKEKQMSS 1377
Score = 37 (18.1 bits), Expect = 9.3e-45, Sum P(4) = 9.3e-45
Identities = 9/31 (29%), Positives = 16/31 (51%)
Query: 980 RRQVYFPDRRLIQFDCGKLQELAILLRKLKS 1010
RR ++ + +FD KL +L + K +S
Sbjct: 1501 RRNLWIFVSKFTEFDARKLHKLYKMAHKKRS 1531
>UNIPROTKB|E2R5Z7 [details] [associations]
symbol:CHD2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
InterPro:IPR025260 Pfam:PF13907 GeneTree:ENSGT00560000076896
EMBL:AAEX03002279 EMBL:AAEX03002280 Ensembl:ENSCAFT00000017614
NextBio:20854276 Uniprot:E2R5Z7
Length = 1831
Score = 548 (198.0 bits), Expect = 4.8e-83, Sum P(5) = 4.8e-83
Identities = 116/292 (39%), Positives = 174/292 (59%)
Query: 455 LREYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTIAMLAHLACEKGIWGPHLIVVPTS 514
LR+YQ GL+WL + K + ILADEMGLGKTI TI+ L++L + ++GP LIVVP S
Sbjct: 487 LRDYQLEGLNWLAHSWCKSNSVILADEMGLGKTIQTISFLSYLFHQHQLYGPFLIVVPLS 546
Query: 515 VMLNWETEFLKWCPAFKILTYFGSAKERKFKRQ-GWL----KPNSFHVCITTYRLIIQDS 569
+ +W+ EF W P ++ Y G R R+ W+ K F+ ITTY ++++D
Sbjct: 547 TLTSWQREFEIWAPEINVVVYIGDLMSRNTIREYEWIHSQTKRLKFNALITTYEILLKDK 606
Query: 570 KVFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPLQNDLMELWSLMHFL 629
V W +L +DEAH +KN S ++TL++F S R+L+TGTPLQN L ELWSL+HF+
Sbjct: 607 TVLGSINWAFLGVDEAHRLKNDDSLLYKTLIDFKSHHRLLITGTPLQNSLKELWSLLHFI 666
Query: 630 MPHIFQSHQEFKDWFCNPISGMVEGQEKVNKEVVDRLHNVLRPFILRRLKRDVEKQLPMK 689
MP F+ ++F++ + G G + LH VL PF+LRR+K+DVEK LP K
Sbjct: 667 MPEKFEFWEDFEE---DHGKGRENGYQS--------LHKVLEPFLLRRVKKDVEKSLPAK 715
Query: 690 QEHVIYCRLSKRQRNLYEDFIASS-ETQATLASANFFGMISVIMQLRKVCNH 740
E ++ +S Q+ Y+ + + + A + G ++++M+L+K CNH
Sbjct: 716 VEQILRVEMSALQKQYYKWILTRNYKALAKGTRGSTSGFLNIVMELKKCCNH 767
Score = 403 (146.9 bits), Expect = 4.8e-83, Sum P(5) = 4.8e-83
Identities = 79/151 (52%), Positives = 110/151 (72%)
Query: 996 GKLQELAILLRKLKSDGHRALIFTQMTKMLDILEEFISLYGYTYMRLDGSTQPEERQTLM 1055
GKL L LL +L+ G+R LIF+QM +MLDIL E++++ Y + RLDGS + E R+ +
Sbjct: 794 GKLILLDKLLTRLRERGNRVLIFSQMVRMLDILAEYLTIKHYPFQRLDGSIKGEIRKQAL 853
Query: 1056 QRFNTN-PKIFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQDRCHRIGQTREV 1114
FN + + F F+LSTR+GG+GINL ADTV+ +DSDWNP D QAQ R HRIGQ ++V
Sbjct: 854 DHFNADGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQV 913
Query: 1115 HIYRLISESTIEENILKKANQKRALDDLVIQ 1145
+IYRL+++ T+EE I+++A +K LD LVIQ
Sbjct: 914 NIYRLVTKGTVEEEIIERAKKKMVLDHLVIQ 944
Score = 53 (23.7 bits), Expect = 4.8e-83, Sum P(5) = 4.8e-83
Identities = 30/117 (25%), Positives = 54/117 (46%)
Query: 1571 IKPEKLKKGNVWSRDCVPSPDV-WLPQEDAILCAVVHEYG-PNWSLV-SDILYGMTASGY 1627
+ PE+ KK + R DV W ++D+ L ++E+G NW L+ +D +T
Sbjct: 1241 VDPEEKKKYCLTCRVKAAHFDVEWGVEDDSRLLLGIYEHGYGNWELIKTDPELKLTDKKI 1300
Query: 1628 YRGRYRHPVHCCER--FRELIQR--YILSVPDNSINEKTSNVGSGKALLKVTEDNVR 1680
PV ++ ++L R Y+L + S+ +K + G +A LK + V+
Sbjct: 1301 L------PVETDKKPQGKQLQTRADYLLKLLRKSLEKKGAVTGGEEAKLKKRKPRVK 1351
Score = 51 (23.0 bits), Expect = 4.8e-83, Sum P(5) = 4.8e-83
Identities = 19/83 (22%), Positives = 36/83 (43%)
Query: 54 KKALDKQLEFLLGQTERYSSMLAENLVDSHKPVQQSPMREQPGIQYKEAD--ENGAEEPG 111
K + KQ + G+ +R S ++ D P +Q+ R + YKE D E +++
Sbjct: 188 KPRVKKQPKTQRGKRKRQDSSDDDD-EDDEAPKRQTRRRAAKNVSYKEDDDFETDSDDLI 246
Query: 112 VQSKEADEDDAEQHSGFEPQLDA 134
+ E ++ + E LD+
Sbjct: 247 EMTGEGADEQQDNSETIEKVLDS 269
Score = 38 (18.4 bits), Expect = 4.8e-83, Sum P(5) = 4.8e-83
Identities = 8/21 (38%), Positives = 10/21 (47%)
Query: 1835 ENHHLKDSQVAENRFRDAARA 1855
E H KD + R DA R+
Sbjct: 1669 EQHWYKDHHYGDRRHMDAHRS 1689
Score = 38 (18.4 bits), Expect = 1.7e-81, Sum P(5) = 1.7e-81
Identities = 26/113 (23%), Positives = 49/113 (43%)
Query: 1142 LVIQSGGYNTEFFKKLDPMELFSGHRTLPMKTMQKEKAINNGNEVSLSNADVEAAL--KC 1199
L I GY K DP + + LP++T +K + G ++ + AD L K
Sbjct: 1274 LGIYEHGYGNWELIKTDPELKLTDKKILPVETDKKPQ----GKQLQ-TRADYLLKLLRKS 1328
Query: 1200 VEDEADYMALKRAEQEEAVDNQEFTEEAVGRPEDDELVIEDTVR-TDEPTDQG 1251
+E + + A+ ++ + E R +D+ V + R +D P+++G
Sbjct: 1329 LEKKGAVTGGEEAKLKKRKPRVK-KENKEPRLKDEHGVEFSSPRHSDNPSEEG 1380
Score = 37 (18.1 bits), Expect = 1.4e-81, Sum P(5) = 1.4e-81
Identities = 10/38 (26%), Positives = 17/38 (44%)
Query: 199 SSAEMGEDEAEPTVVEEGHVQGNGNDLLAGSKLDTSGS 236
S G D + E+G G+G+ + S ++S S
Sbjct: 25 SEEASGSDSGSQSESEQGSDPGSGHGSESNSSSESSES 62
Score = 37 (18.1 bits), Expect = 2.2e-81, Sum P(5) = 2.2e-81
Identities = 8/21 (38%), Positives = 11/21 (52%)
Query: 1170 PMKTMQKEKAINNGNEVSLSN 1190
PMK QK+K E +S+
Sbjct: 1391 PMKKKQKKKENKENKEKQMSS 1411
Score = 37 (18.1 bits), Expect = 1.6e-44, Sum P(4) = 1.6e-44
Identities = 9/31 (29%), Positives = 16/31 (51%)
Query: 980 RRQVYFPDRRLIQFDCGKLQELAILLRKLKS 1010
RR ++ + +FD KL +L + K +S
Sbjct: 1534 RRNLWIFVSKFTEFDARKLHKLYKMAHKKRS 1564
>ZFIN|ZDB-GENE-050419-256 [details] [associations]
symbol:chd2 "chromodomain helicase DNA binding
protein 2" species:7955 "Danio rerio" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 Pfam:PF00385 ZFIN:ZDB-GENE-050419-256
GO:GO:0005524 GO:GO:0005634 GO:GO:0003677 GO:GO:0004386
InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR023780 InterPro:IPR023779
PROSITE:PS00598 InterPro:IPR025260 Pfam:PF13907
GeneTree:ENSGT00560000076896 EMBL:BX649578 IPI:IPI00999128
Ensembl:ENSDART00000127730 ArrayExpress:E7F7R2 Bgee:E7F7R2
Uniprot:E7F7R2
Length = 1813
Score = 553 (199.7 bits), Expect = 5.7e-83, Sum P(4) = 5.7e-83
Identities = 116/299 (38%), Positives = 181/299 (60%)
Query: 455 LREYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTIAMLAHLACEKGIWGPHLIVVPTS 514
LR+YQ G++WL + + + ILADEMGLGKTI TI+ L++L + ++GP ++VVP S
Sbjct: 489 LRDYQLDGVNWLAHSWCRCNSVILADEMGLGKTIQTISFLSYLFHQHQLYGPFIVVVPLS 548
Query: 515 VMLNWETEFLKWCPAFKILTYFGSAKERKFKRQ-GWLKPNS----FHVCITTYRLIIQDS 569
+ +W+ EF W P ++ Y G RK R W+ P + F+ +TTY ++++D
Sbjct: 549 TLTSWQREFDTWAPDMNVVVYLGDVTSRKTIRDYEWINPQTKRIKFNALLTTYEILLKDK 608
Query: 570 KVFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPLQNDLMELWSLMHFL 629
V W +L +DEAH +KN S ++TL++F S R+L+TGTPLQN L ELWSL+HFL
Sbjct: 609 GVLGNINWAFLGVDEAHRLKNDDSLLYKTLIDFRSNHRLLITGTPLQNSLKELWSLLHFL 668
Query: 630 MPHIFQSHQEFKDWFCNPISGMVEGQEKVNKEVVDRLHNVLRPFILRRLKRDVEKQLPMK 689
M F+S ++F+D G+ + N LH VL PF+LRR+K+DVEK LP K
Sbjct: 669 MSDKFESWEDFED---------EHGKGRDNG--YQSLHKVLEPFLLRRVKKDVEKSLPAK 717
Query: 690 QEHVIYCRLSKRQRNLYEDFIA---SSETQATLASANFFGMISVIMQLRKVCNHPDLFE 745
E ++ +S +Q+ Y+ + + ++ T S++ G ++++M+L+K CNH L +
Sbjct: 718 VEQILRVDMSAQQKQFYKWILTRNFKALSKGTRGSSS--GFLNIVMELKKCCNHAFLIK 774
Score = 410 (149.4 bits), Expect = 5.7e-83, Sum P(4) = 5.7e-83
Identities = 97/236 (41%), Positives = 140/236 (59%)
Query: 996 GKLQELAILLRKLKSDGHRALIFTQMTKMLDILEEFISLYGYTYMRLDGSTQPEERQTLM 1055
GKL L LL +LK G+R LIF+QM +MLDIL +++S+ Y + RLDGS + E R+ +
Sbjct: 796 GKLVLLDKLLTRLKDRGNRVLIFSQMVRMLDILADYLSMKRYQFQRLDGSIKGELRKQAL 855
Query: 1056 QRFNTN-PKIFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQDRCHRIGQTREV 1114
FN + F F+LSTR+GG+GINL ADTV+ +DSDWNP D QAQ R HRIGQ ++V
Sbjct: 856 DHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQV 915
Query: 1115 HIYRLISESTIEENILKKANQKRALDDLVIQSGGYNTEFFKKLDPMELFSGHRTLPMKTM 1174
+IYRL+++ T+EE+I+++A +K LD LVIQ +T LD S P
Sbjct: 916 NIYRLVTKGTVEEDIIERAKKKMVLDHLVIQR--MDTTGRTVLDNSSANSNSN--PFNKE 971
Query: 1175 QKEKAINNGNEVSLSNADVEAALKCVEDEADYMALKRAEQEEAVDNQEFTEEAVGR 1230
+ + G E A+ E + + E + D + L+ AE E+ T+E + +
Sbjct: 972 ELSAILKFGAEDLFKEAEGEES-EPQEMDIDEI-LRLAETRESDQGSSATDELLSQ 1025
Score = 46 (21.3 bits), Expect = 4.5e-82, Sum P(5) = 4.5e-82
Identities = 9/29 (31%), Positives = 15/29 (51%)
Query: 262 QVRDTSKKSGASTQKQALYDFSDEQEDGD 290
Q + ++ K +KQ + SDE +D D
Sbjct: 190 QTKSSASKQSQKGRKQRKQESSDEDDDDD 218
Score = 43 (20.2 bits), Expect = 5.7e-83, Sum P(4) = 5.7e-83
Identities = 14/75 (18%), Positives = 32/75 (42%)
Query: 214 EEGHVQGNGNDLLAGSKLDTSGSLVRRCDEINGGLSISENHLLDIETSQVRDTSKKSGAS 273
+EG Q N + A + + SGS E G +++ + ++ ++ +SG+
Sbjct: 11 DEGSTQSNASSNSASEESNRSGSESGSQSESEQGSEKAQSRHSESNSTSDSESHSESGSE 70
Query: 274 TQKQALYDFSDEQED 288
+ + S + +D
Sbjct: 71 SNGSKSHQSSAQVKD 85
Score = 38 (18.4 bits), Expect = 1.9e-82, Sum P(4) = 1.9e-82
Identities = 12/58 (20%), Positives = 24/58 (41%)
Query: 67 QTERYSSMLAENLVDSHK-PVQQSPMREQPGIQYKEADENGAEEPGVQSKEADEDDAE 123
+T S E V S + P ++ + Q ++ + +E + + D+DD E
Sbjct: 166 ETSSSESEQEEKKVRSRRLPARRPQTKSSASKQSQKGRKQRKQESSDEDDDDDDDDEE 223
Score = 37 (18.1 bits), Expect = 5.7e-83, Sum P(4) = 5.7e-83
Identities = 11/45 (24%), Positives = 16/45 (35%)
Query: 1835 ENHHLKDSQVAENRFRDAARACIEDSLGWASSAFPANDAKLRSVP 1879
+ H KD + + FR DS G + P +S P
Sbjct: 1557 KEHKKKDDPIKKKPFRPEPSGSSRDSTGAQPTTKPHPPVSHQSGP 1601
Score = 37 (18.1 bits), Expect = 4.5e-82, Sum P(5) = 4.5e-82
Identities = 10/41 (24%), Positives = 20/41 (48%)
Query: 196 GRESSAEMGEDEAEPTVVEEGHVQGNGNDLLAGSKLDTSGS 236
G +S +E G ++A+ E + + +GS+ + S S
Sbjct: 36 GSQSESEQGSEKAQSRHSESNSTSDSESHSESGSESNGSKS 76
>UNIPROTKB|O14647 [details] [associations]
symbol:CHD2 "Chromodomain-helicase-DNA-binding protein 2"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0004003 "ATP-dependent DNA helicase activity"
evidence=TAS] [GO:0006357 "regulation of transcription from RNA
polymerase II promoter" evidence=TAS] InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298
SMART:SM00490 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
GO:GO:0003677 GO:GO:0006357 GO:GO:0004003 EMBL:CH471101
InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
InterPro:IPR023779 PROSITE:PS00598 HOVERGEN:HBG005325
InterPro:IPR025260 Pfam:PF13907 KO:K11367 HOGENOM:HOG000207917
EMBL:AF006514 EMBL:BT007050 EMBL:FJ515838 EMBL:AC013394
EMBL:BC007347 EMBL:CR978407 IPI:IPI00023109 IPI:IPI00815893
RefSeq:NP_001036037.1 RefSeq:NP_001262.3 UniGene:Hs.220864
ProteinModelPortal:O14647 SMR:O14647 IntAct:O14647 STRING:O14647
PhosphoSite:O14647 PaxDb:O14647 PRIDE:O14647 DNASU:1106
Ensembl:ENST00000394196 Ensembl:ENST00000420239
Ensembl:ENST00000557381 GeneID:1106 KEGG:hsa:1106 UCSC:uc002bso.1
UCSC:uc002bsp.3 CTD:1106 GeneCards:GC15P093533 HGNC:HGNC:1917
MIM:602119 neXtProt:NX_O14647 PharmGKB:PA26453 InParanoid:O14647
OMA:AHSWCKN OrthoDB:EOG4QRH36 ChiTaRS:CHD2 GenomeRNAi:1106
NextBio:4584 ArrayExpress:O14647 Bgee:O14647 CleanEx:HS_CHD2
Genevestigator:O14647 GermOnline:ENSG00000173575 Uniprot:O14647
Length = 1828
Score = 550 (198.7 bits), Expect = 5.8e-83, Sum P(5) = 5.8e-83
Identities = 116/292 (39%), Positives = 174/292 (59%)
Query: 455 LREYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTIAMLAHLACEKGIWGPHLIVVPTS 514
LR+YQ GL+WL + K + ILADEMGLGKTI TI+ L++L + ++GP LIVVP S
Sbjct: 484 LRDYQLEGLNWLAHSWCKNNSVILADEMGLGKTIQTISFLSYLFHQHQLYGPFLIVVPLS 543
Query: 515 VMLNWETEFLKWCPAFKILTYFGSAKERKFKRQ-GWL----KPNSFHVCITTYRLIIQDS 569
+ +W+ EF W P ++ Y G R R+ W+ K F+ ITTY ++++D
Sbjct: 544 TLTSWQREFEIWAPEINVVVYIGDLMSRNTIREYEWIHSQTKRLKFNALITTYEILLKDK 603
Query: 570 KVFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPLQNDLMELWSLMHFL 629
V W +L +DEAH +KN S ++TL++F S R+L+TGTPLQN L ELWSL+HF+
Sbjct: 604 TVLGSINWAFLGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSLLHFI 663
Query: 630 MPHIFQSHQEFKDWFCNPISGMVEGQEKVNKEVVDRLHNVLRPFILRRLKRDVEKQLPMK 689
MP F+ ++F++ + G G + LH VL PF+LRR+K+DVEK LP K
Sbjct: 664 MPEKFEFWEDFEE---DHGKGRENGYQS--------LHKVLEPFLLRRVKKDVEKSLPAK 712
Query: 690 QEHVIYCRLSKRQRNLYEDFIASS-ETQATLASANFFGMISVIMQLRKVCNH 740
E ++ +S Q+ Y+ + + + A + G ++++M+L+K CNH
Sbjct: 713 VEQILRVEMSALQKQYYKWILTRNYKALAKGTRGSTSGFLNIVMELKKCCNH 764
Score = 403 (146.9 bits), Expect = 5.8e-83, Sum P(5) = 5.8e-83
Identities = 79/151 (52%), Positives = 110/151 (72%)
Query: 996 GKLQELAILLRKLKSDGHRALIFTQMTKMLDILEEFISLYGYTYMRLDGSTQPEERQTLM 1055
GKL L LL +L+ G+R LIF+QM +MLDIL E++++ Y + RLDGS + E R+ +
Sbjct: 791 GKLILLDKLLTRLRERGNRVLIFSQMVRMLDILAEYLTIKHYPFQRLDGSIKGEIRKQAL 850
Query: 1056 QRFNTN-PKIFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQDRCHRIGQTREV 1114
FN + + F F+LSTR+GG+GINL ADTV+ +DSDWNP D QAQ R HRIGQ ++V
Sbjct: 851 DHFNADGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQV 910
Query: 1115 HIYRLISESTIEENILKKANQKRALDDLVIQ 1145
+IYRL+++ T+EE I+++A +K LD LVIQ
Sbjct: 911 NIYRLVTKGTVEEEIIERAKKKMVLDHLVIQ 941
Score = 52 (23.4 bits), Expect = 5.8e-83, Sum P(5) = 5.8e-83
Identities = 33/136 (24%), Positives = 61/136 (44%)
Query: 1571 IKPEKLKKGNVWSRDCVPSPDV-WLPQEDAILCAVVHEYG-PNWSLV-SDILYGMTASGY 1627
+ PE+ KK + R DV W ++D+ L ++E+G NW L+ +D +T
Sbjct: 1238 VDPEEKKKYCLTCRVKAAHFDVEWGVEDDSRLLLGIYEHGYGNWELIKTDPELKLTDKIL 1297
Query: 1628 YRGRYRHPVHCCERFRELIQR--YILSVPDNSINEKTSNVGSGKALLKVTEDNVRTLLNV 1685
+ P + ++L R Y+L + + +K + G +A LK + V+ V
Sbjct: 1298 PVETDKKP-----QGKQLQTRADYLLKLLRKGLEKKGAVTGGEEAKLKKRKPRVKKENKV 1352
Query: 1686 AAEQEDN--ELLLQKH 1699
+E++ EL +H
Sbjct: 1353 PRLKEEHGIELSSPRH 1368
Score = 49 (22.3 bits), Expect = 5.8e-83, Sum P(5) = 5.8e-83
Identities = 19/83 (22%), Positives = 36/83 (43%)
Query: 54 KKALDKQLEFLLGQTERYSSMLAENLVDSHKPVQQSPMREQPGIQYKEAD--ENGAEEPG 111
K + KQ + G+ ++ S E+ D P +Q+ R + YKE D E +++
Sbjct: 188 KPRVKKQPKTQRGKRKKQDSS-DEDDDDDEAPKRQTRRRAAKNVSYKEDDDFETDSDDLI 246
Query: 112 VQSKEADEDDAEQHSGFEPQLDA 134
+ E ++ + E LD+
Sbjct: 247 EMTGEGVDEQQDNSETIEKVLDS 269
Score = 38 (18.4 bits), Expect = 5.8e-83, Sum P(5) = 5.8e-83
Identities = 8/21 (38%), Positives = 10/21 (47%)
Query: 1835 ENHHLKDSQVAENRFRDAARA 1855
E H KD + R DA R+
Sbjct: 1666 EQHWYKDHHYGDRRHMDAHRS 1686
Score = 37 (18.1 bits), Expect = 1.0e-81, Sum P(5) = 1.0e-81
Identities = 10/38 (26%), Positives = 17/38 (44%)
Query: 199 SSAEMGEDEAEPTVVEEGHVQGNGNDLLAGSKLDTSGS 236
S G D + E+G G+G+ + S ++S S
Sbjct: 25 SEEASGSDSGSQSESEQGSDPGSGHGSESNSSSESSES 62
Score = 37 (18.1 bits), Expect = 2.1e-81, Sum P(5) = 2.1e-81
Identities = 8/21 (38%), Positives = 11/21 (52%)
Query: 1170 PMKTMQKEKAINNGNEVSLSN 1190
PMK QK+K E +S+
Sbjct: 1387 PMKKKQKKKENKENKEKQMSS 1407
Score = 37 (18.1 bits), Expect = 1.6e-44, Sum P(4) = 1.6e-44
Identities = 9/31 (29%), Positives = 16/31 (51%)
Query: 980 RRQVYFPDRRLIQFDCGKLQELAILLRKLKS 1010
RR ++ + +FD KL +L + K +S
Sbjct: 1530 RRNLWIFVSKFTEFDARKLHKLYKMAHKKRS 1560
>UNIPROTKB|J9PA90 [details] [associations]
symbol:CHD2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
InterPro:IPR025260 Pfam:PF13907 GeneTree:ENSGT00560000076896
OMA:AHSWCKN EMBL:AAEX03002279 EMBL:AAEX03002280
Ensembl:ENSCAFT00000045903 Uniprot:J9PA90
Length = 1840
Score = 548 (198.0 bits), Expect = 6.3e-83, Sum P(5) = 6.3e-83
Identities = 116/292 (39%), Positives = 174/292 (59%)
Query: 455 LREYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTIAMLAHLACEKGIWGPHLIVVPTS 514
LR+YQ GL+WL + K + ILADEMGLGKTI TI+ L++L + ++GP LIVVP S
Sbjct: 497 LRDYQLEGLNWLAHSWCKSNSVILADEMGLGKTIQTISFLSYLFHQHQLYGPFLIVVPLS 556
Query: 515 VMLNWETEFLKWCPAFKILTYFGSAKERKFKRQ-GWL----KPNSFHVCITTYRLIIQDS 569
+ +W+ EF W P ++ Y G R R+ W+ K F+ ITTY ++++D
Sbjct: 557 TLTSWQREFEIWAPEINVVVYIGDLMSRNTIREYEWIHSQTKRLKFNALITTYEILLKDK 616
Query: 570 KVFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPLQNDLMELWSLMHFL 629
V W +L +DEAH +KN S ++TL++F S R+L+TGTPLQN L ELWSL+HF+
Sbjct: 617 TVLGSINWAFLGVDEAHRLKNDDSLLYKTLIDFKSHHRLLITGTPLQNSLKELWSLLHFI 676
Query: 630 MPHIFQSHQEFKDWFCNPISGMVEGQEKVNKEVVDRLHNVLRPFILRRLKRDVEKQLPMK 689
MP F+ ++F++ + G G + LH VL PF+LRR+K+DVEK LP K
Sbjct: 677 MPEKFEFWEDFEE---DHGKGRENGYQS--------LHKVLEPFLLRRVKKDVEKSLPAK 725
Query: 690 QEHVIYCRLSKRQRNLYEDFIASS-ETQATLASANFFGMISVIMQLRKVCNH 740
E ++ +S Q+ Y+ + + + A + G ++++M+L+K CNH
Sbjct: 726 VEQILRVEMSALQKQYYKWILTRNYKALAKGTRGSTSGFLNIVMELKKCCNH 777
Score = 403 (146.9 bits), Expect = 6.3e-83, Sum P(5) = 6.3e-83
Identities = 79/151 (52%), Positives = 110/151 (72%)
Query: 996 GKLQELAILLRKLKSDGHRALIFTQMTKMLDILEEFISLYGYTYMRLDGSTQPEERQTLM 1055
GKL L LL +L+ G+R LIF+QM +MLDIL E++++ Y + RLDGS + E R+ +
Sbjct: 804 GKLILLDKLLTRLRERGNRVLIFSQMVRMLDILAEYLTIKHYPFQRLDGSIKGEIRKQAL 863
Query: 1056 QRFNTN-PKIFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQDRCHRIGQTREV 1114
FN + + F F+LSTR+GG+GINL ADTV+ +DSDWNP D QAQ R HRIGQ ++V
Sbjct: 864 DHFNADGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQV 923
Query: 1115 HIYRLISESTIEENILKKANQKRALDDLVIQ 1145
+IYRL+++ T+EE I+++A +K LD LVIQ
Sbjct: 924 NIYRLVTKGTVEEEIIERAKKKMVLDHLVIQ 954
Score = 52 (23.4 bits), Expect = 6.3e-83, Sum P(5) = 6.3e-83
Identities = 29/115 (25%), Positives = 53/115 (46%)
Query: 1571 IKPEKLKKGNVWSRDCVPSPDV-WLPQEDAILCAVVHEYG-PNWSLV-SDILYGMTASGY 1627
+ PE+ KK + R DV W ++D+ L ++E+G NW L+ +D +T
Sbjct: 1251 VDPEEKKKYCLTCRVKAAHFDVEWGVEDDSRLLLGIYEHGYGNWELIKTDPELKLTDKIL 1310
Query: 1628 YRGRYRHPVHCCERFRELIQR--YILSVPDNSINEKTSNVGSGKALLKVTEDNVR 1680
+ P + ++L R Y+L + S+ +K + G +A LK + V+
Sbjct: 1311 PVETDKKP-----QGKQLQTRADYLLKLLRKSLEKKGAVTGGEEAKLKKRKPRVK 1360
Score = 51 (23.0 bits), Expect = 6.3e-83, Sum P(5) = 6.3e-83
Identities = 19/83 (22%), Positives = 36/83 (43%)
Query: 54 KKALDKQLEFLLGQTERYSSMLAENLVDSHKPVQQSPMREQPGIQYKEAD--ENGAEEPG 111
K + KQ + G+ +R S ++ D P +Q+ R + YKE D E +++
Sbjct: 201 KPRVKKQPKTQRGKRKRQDSSDDDD-EDDEAPKRQTRRRAAKNVSYKEDDDFETDSDDLI 259
Query: 112 VQSKEADEDDAEQHSGFEPQLDA 134
+ E ++ + E LD+
Sbjct: 260 EMTGEGADEQQDNSETIEKVLDS 282
Score = 41 (19.5 bits), Expect = 6.9e-82, Sum P(5) = 6.9e-82
Identities = 12/44 (27%), Positives = 21/44 (47%)
Query: 194 KVGRESSAEM-GEDEAEPTVVEEGHVQGNGNDLLAGSKLDTSGS 236
K+ +S E G D + E+G G+G+ + S ++S S
Sbjct: 32 KLSHSASEEASGSDSGSQSESEQGSDPGSGHGSESNSSSESSES 75
Score = 38 (18.4 bits), Expect = 6.3e-83, Sum P(5) = 6.3e-83
Identities = 8/21 (38%), Positives = 10/21 (47%)
Query: 1835 ENHHLKDSQVAENRFRDAARA 1855
E H KD + R DA R+
Sbjct: 1678 EQHWYKDHHYGDRRHMDAHRS 1698
Score = 37 (18.1 bits), Expect = 2.3e-81, Sum P(5) = 2.3e-81
Identities = 8/21 (38%), Positives = 11/21 (52%)
Query: 1170 PMKTMQKEKAINNGNEVSLSN 1190
PMK QK+K E +S+
Sbjct: 1400 PMKKKQKKKENKENKEKQMSS 1420
Score = 37 (18.1 bits), Expect = 1.7e-44, Sum P(4) = 1.7e-44
Identities = 9/31 (29%), Positives = 16/31 (51%)
Query: 980 RRQVYFPDRRLIQFDCGKLQELAILLRKLKS 1010
RR ++ + +FD KL +L + K +S
Sbjct: 1543 RRNLWIFVSKFTEFDARKLHKLYKMAHKKRS 1573
>ZFIN|ZDB-GENE-040426-892 [details] [associations]
symbol:chd1l "chromodomain helicase DNA binding
protein 1-like" species:7955 "Danio rerio" [GO:0003677 "DNA
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=ISS] [GO:0006974 "response to DNA damage stimulus"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=IEA;ISS]
[GO:0000166 "nucleotide binding" evidence=IEA;ISS] [GO:0016887
"ATPase activity" evidence=ISS] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 InterPro:IPR001357
ZFIN:ZDB-GENE-040426-892 GO:GO:0005524 GO:GO:0005634 GO:GO:0000166
GO:GO:0003677 GO:GO:0006281 GO:GO:0006974 GO:GO:0016887
GO:GO:0006338 GO:GO:0004386 SUPFAM:SSF52113 PROSITE:PS50172
HSSP:Q97XQ5 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR002589 PROSITE:PS51154 CTD:9557
HOGENOM:HOG000030789 HOVERGEN:HBG077542 OrthoDB:EOG4SXNBV
EMBL:BC050498 IPI:IPI00482841 RefSeq:NP_956607.1 UniGene:Dr.84280
ProteinModelPortal:Q7ZU90 PRIDE:Q7ZU90 GeneID:393283
KEGG:dre:393283 InParanoid:Q7ZU90 NextBio:20814340
ArrayExpress:Q7ZU90 Uniprot:Q7ZU90
Length = 1026
Score = 518 (187.4 bits), Expect = 7.8e-83, Sum P(2) = 7.8e-83
Identities = 113/293 (38%), Positives = 174/293 (59%)
Query: 455 LREYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTIAMLAHLACEKGIWGPHLIVVPTS 514
LR YQ G+ WL + + IL DEMGLGKT TI++LA+ + GP L++ P +
Sbjct: 35 LRPYQLDGVKWLSLCMKNQQGCILGDEMGLGKTCQTISLLAYARGSLKMNGPFLVLCPLA 94
Query: 515 VMLNWETEFLKWCPAFKILTYFGSAKERKFKRQGWLKPNS-FHVCITTYRLIIQDSKVFK 573
V+ NW E ++CP+ ++ Y G KE++ + Q LK + FHV +TTY + ++D++ K
Sbjct: 95 VLENWRQELERFCPSLSVICYTGD-KEKRAELQQNLKSDPRFHVLLTTYEMCLKDARYLK 153
Query: 574 RKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPLQNDLMELWSLMHFLMPHI 633
KWK L++DEAH +KN +S QTL F R+LLTGTP+QN+L E++SL+ F+ P +
Sbjct: 154 SWKWKILVVDEAHRLKNQESLLHQTLKEFTVGFRVLLTGTPIQNNLQEVYSLLTFIQPSV 213
Query: 634 FQSHQEFKDWFCNPISGMVEGQEKVNKEVVDRLHNVLRPFILRRLKRDVEKQLPMKQEHV 693
F + +D F N + + + +VD LH VL+PF+LRR+K +V +LP K E V
Sbjct: 214 FLP-EAVED-FVNAYADI-----QTEPALVDELHQVLQPFLLRRVKAEVAAELPKKTELV 266
Query: 694 IYCRLSKRQRNLYEDFIASSETQATLASANFFGMISVIMQLRKVCNHPDLFEG 746
++ LS Q+ Y+ + + +++V+MQLRK +HP LF+G
Sbjct: 267 VFHGLSALQKRYYKAILMRDLDAFRTDQSTKTRLLNVLMQLRKCVDHPYLFDG 319
Score = 407 (148.3 bits), Expect = 7.8e-83, Sum P(2) = 7.8e-83
Identities = 112/308 (36%), Positives = 168/308 (54%)
Query: 996 GKLQELAILLRKLKSDGHRALIFTQMTKMLDILEEFISLYGYTYMRLDGSTQPEERQTLM 1055
GKL L +L L+ GH L+F+QMT+MLDIL++++ GY+Y RLDGS + EER +
Sbjct: 336 GKLSLLDSMLAYLQEGGHHVLLFSQMTRMLDILQDYLEYRGYSYERLDGSVRGEERNLAI 395
Query: 1056 QRFNTNPKIFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQDRCHRIGQTREVH 1115
+ F+T +F+F+LST++GGVG+NL ADTVIF D D+NP D QA R HRIGQTR V
Sbjct: 396 KNFSTKD-VFIFLLSTKAGGVGMNLTAADTVIFVDGDFNPQNDLQAAARAHRIGQTRPVK 454
Query: 1116 IYRLISESTIEENILKKANQKRALDDLVIQSGGYNTEFFKKLDPME-LFSGHRTLPMKTM 1174
+ RL+ TIEE I +A K L D VI+ G F LD + SG + +
Sbjct: 455 VIRLLGRDTIEEIIYSRAVSKLRLTDTVIEEGR-----FSLLDQAQSAASGLQLSEILKF 509
Query: 1175 QKEKAINNGNEVSLSNADVEAALKCVED-----EADYMALKRA--EQEEAVDNQEFTEEA 1227
+K +++ E S+ + D++ L D + ++ L + E++E ++ Q
Sbjct: 510 GVDKLLSS-EESSVQDVDLQLILGQSRDGQWLTDEEHAKLNESNEEEDEDMEGQNHMYYF 568
Query: 1228 VGR-----P--EDD---ELVIEDTVRTDEPTDQGGCMTANNDNGMMLTG---NDPKEERA 1274
G+ P ED+ EL++E E ++ G N G+ L+G N +++R
Sbjct: 569 EGKDYSKDPSAEDEKTFELLLEKQFAEMEDAEKEG-RALRNKAGVSLSGPLINPARKKRP 627
Query: 1275 LTFAAKED 1282
LT A E+
Sbjct: 628 LTEAELEE 635
Score = 37 (18.1 bits), Expect = 7.1e-44, Sum P(2) = 7.1e-44
Identities = 8/23 (34%), Positives = 12/23 (52%)
Query: 1677 DNVRTLLNVAAEQEDNELLLQKH 1699
D LN + E+ED ++ Q H
Sbjct: 542 DEEHAKLNESNEEEDEDMEGQNH 564
>SGD|S000000966 [details] [associations]
symbol:CHD1 "Chromatin remodeler that regulates various
aspects of transcription" species:4932 "Saccharomyces cerevisiae"
[GO:0030874 "nucleolar chromatin" evidence=IDA] [GO:0042766
"nucleosome mobilization" evidence=IDA] [GO:0000182 "rDNA binding"
evidence=IDA] [GO:0005739 "mitochondrion" evidence=IDA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0046695 "SLIK (SAGA-like)
complex" evidence=IDA] [GO:0000124 "SAGA complex" evidence=IDA]
[GO:0008094 "DNA-dependent ATPase activity" evidence=IDA]
[GO:0034401 "regulation of transcription by chromatin organization"
evidence=IGI;IMP] [GO:0043044 "ATP-dependent chromatin remodeling"
evidence=IDA] [GO:0001178 "regulation of transcriptional start site
selection at RNA polymerase II promoter" evidence=IGI] [GO:2000616
"negative regulation of histone H3-K9 acetylation" evidence=IMP]
[GO:0071441 "negative regulation of histone H3-K14 acetylation"
evidence=IMP] [GO:0006368 "transcription elongation from RNA
polymerase II promoter" evidence=IGI;IPI] [GO:0000790 "nuclear
chromatin" evidence=IDA] [GO:0031490 "chromatin DNA binding"
evidence=IDA] [GO:0016584 "nucleosome positioning"
evidence=IGI;IDA] [GO:0003677 "DNA binding" evidence=IEA;IDA]
[GO:0006369 "termination of RNA polymerase II transcription"
evidence=IGI;IMP] [GO:0071894 "histone H2B conserved C-terminal
lysine ubiquitination" evidence=IMP] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0035064 "methylated histone residue binding" evidence=IDA]
[GO:2000104 "negative regulation of DNA-dependent DNA replication"
evidence=IGI] [GO:0006363 "termination of RNA polymerase I
transcription" evidence=IGI] InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR009057 Pfam:PF00176 Pfam:PF00271
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298
SMART:SM00490 SGD:S000000966 Pfam:PF00385 GO:GO:0005739
GO:GO:0005524 GO:GO:2000104 Gene3D:1.10.10.60 SUPFAM:SSF46689
EMBL:BK006939 GO:GO:0000124 GO:GO:0046695 GO:GO:0004386
GO:GO:0034401 GO:GO:0006368 GO:GO:0035064 GO:GO:0031490
GO:GO:0042766 InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0043044
GO:GO:0016584 EMBL:U18917 InterPro:IPR023780 InterPro:IPR023779
PROSITE:PS00598 GO:GO:0006363 GO:GO:0008094 GO:GO:0006369
InterPro:IPR025260 Pfam:PF13907 GeneTree:ENSGT00560000076896
KO:K11367 HOGENOM:HOG000207917 PIR:S30818 RefSeq:NP_011091.1
PDB:2DY7 PDB:2DY8 PDB:2H1E PDB:2XB0 PDB:3MWY PDB:3TED PDBsum:2DY7
PDBsum:2DY8 PDBsum:2H1E PDBsum:2XB0 PDBsum:3MWY PDBsum:3TED
ProteinModelPortal:P32657 SMR:P32657 DIP:DIP-6362N IntAct:P32657
MINT:MINT-618890 STRING:P32657 PaxDb:P32657 PeptideAtlas:P32657
EnsemblFungi:YER164W GeneID:856911 KEGG:sce:YER164W CYGD:YER164w
OMA:IKWQFMA OrthoDB:EOG4TF3TB SABIO-RK:P32657
EvolutionaryTrace:P32657 NextBio:983353 Genevestigator:P32657
GermOnline:YER164W GO:GO:0030874 GO:GO:0000182 GO:GO:0071441
GO:GO:2000616 GO:GO:0001178 Uniprot:P32657
Length = 1468
Score = 537 (194.1 bits), Expect = 1.3e-82, Sum P(4) = 1.3e-82
Identities = 117/308 (37%), Positives = 180/308 (58%)
Query: 448 PFLLKFPLREYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTIAMLAHLACEKGIWGPH 507
PF+ LR++Q G++W+ ++ K NGILADEMGLGKT+ T+A ++ L + GPH
Sbjct: 369 PFIKGGELRDFQLTGINWMAFLWSKGDNGILADEMGLGKTVQTVAFISWLIFARRQNGPH 428
Query: 508 LIVVPTSVMLNWETEFLKWCPAFKILTYFGSAKERKFKRQG--WLKPNS-------FHVC 558
+IVVP S M W F KW P + Y G+ K R R+ + P + F+V
Sbjct: 429 IIVVPLSTMPAWLDTFEKWAPDLNCICYMGNQKSRDTIREYEFYTNPRAKGKKTMKFNVL 488
Query: 559 ITTYRLIIQDSKVFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPLQND 618
+TTY I++D KW+++ +DEAH +KN +S +++L +F R+L+TGTPLQN+
Sbjct: 489 LTTYEYILKDRAELGSIKWQFMAVDEAHRLKNAESSLYESLNSFKVANRMLITGTPLQNN 548
Query: 619 LMELWSLMHFLMPHIFQSHQEFKDWFCNPISGMVEGQEKVNKEVVDRLHNVLRPFILRRL 678
+ EL +L++FLMP F QE D+ E Q++ +E + LH ++PFILRRL
Sbjct: 549 IKELAALVNFLMPGRFTIDQEI-DF---------ENQDEEQEEYIHDLHRRIQPFILRRL 598
Query: 679 KRDVEKQLPMKQEHVIYCRLSKRQRNLYEDFIASSETQATL-ASANFFGMISVIMQLRKV 737
K+DVEK LP K E ++ LS Q Y++ + + + T A F +++++ +L+K
Sbjct: 599 KKDVEKSLPSKTERILRVELSDVQTEYYKNILTKNYSALTAGAKGGHFSLLNIMNELKKA 658
Query: 738 CNHPDLFE 745
NHP LF+
Sbjct: 659 SNHPYLFD 666
Score = 406 (148.0 bits), Expect = 1.3e-82, Sum P(4) = 1.3e-82
Identities = 97/267 (36%), Positives = 151/267 (56%)
Query: 988 RRLIQFDCGKLQELAILLRKLKSDGHRALIFTQMTKMLDILEEFISLYGYTYMRLDGSTQ 1047
R LI GK+ L LL +LK DGHR LIF+QM +MLDIL +++S+ G + RLDG+
Sbjct: 688 RGLIM-SSGKMVLLDQLLTRLKKDGHRVLIFSQMVRMLDILGDYLSIKGINFQRLDGTVP 746
Query: 1048 PEERQTLMQRFNT-NPKIFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQDRCH 1106
+R+ + FN+ + F+F+LSTR+GG+GINL+ ADTV+ +DSDWNP D QA R H
Sbjct: 747 SAQRRISIDHFNSPDSNDFVFLLSTRAGGLGINLMTADTVVIFDSDWNPQADLQAMARAH 806
Query: 1107 RIGQTREVHIYRLISESTIEENILKKANQKRALDDLVIQSGGYN-TEFFKKLDPMELFSG 1165
RIGQ V +YRL+S+ T+EE +L++A +K L+ +I G + ++ KK +P +G
Sbjct: 807 RIGQKNHVMVYRLVSKDTVEEEVLERARKKMILEYAIISLGVTDGNKYTKKNEPN---AG 863
Query: 1166 HRTLPMKTMQKEKAINNGNEVSLSNADVEAALKCVEDEADYMALKRAEQ--EEAVDNQEF 1223
+ +K N+ L + +++ L ED L + EE + E
Sbjct: 864 ELSAILKFGAGNMFTATDNQKKLEDLNLDDVLNHAEDHVTTPDLGESHLGGEEFLKQFEV 923
Query: 1224 TEEAVGRPEDDELVIEDTVRTDEPTDQ 1250
T+ DD ++ E+ ++ + +Q
Sbjct: 924 TDYKADIDWDD-IIPEEELKKLQDEEQ 949
Score = 47 (21.6 bits), Expect = 1.3e-82, Sum P(4) = 1.3e-82
Identities = 13/50 (26%), Positives = 22/50 (44%)
Query: 81 DSHKPVQQSPMREQPGIQYKE---ADENGAEEPGVQSKEADEDDAEQHSG 127
D ++QS + I+ E DE G E+ G E D ++ + + G
Sbjct: 40 DDEDNIKQSRRKRMTTIEDDEDEFEDEEGEEDSGEDEDEEDFEEDDDYYG 89
Score = 44 (20.5 bits), Expect = 1.3e-82, Sum P(4) = 1.3e-82
Identities = 13/46 (28%), Positives = 19/46 (41%)
Query: 1573 PEKLKKGNVWSRDCVPSPDVWLPQEDAILCAVVHEYG-PNWSLVSD 1617
P K GN + W +ED L V +YG +W+ + D
Sbjct: 1155 PLKFSLGNNTPKPVQNWSSNWTKEEDEKLLIGVFKYGYGSWTQIRD 1200
Score = 41 (19.5 bits), Expect = 1.2e-44, Sum P(4) = 1.2e-44
Identities = 15/40 (37%), Positives = 20/40 (50%)
Query: 1120 ISESTIE---ENILKKANQKRALDDLVIQSGGYNTEFFKK 1156
I ES + + ILK N K LD+L I G + F+K
Sbjct: 1010 IGESEVRALYKAILKFGNLKEILDEL-IADGTLPVKSFEK 1048
Score = 39 (18.8 bits), Expect = 2.7e-30, Sum P(4) = 2.7e-30
Identities = 7/22 (31%), Positives = 15/22 (68%)
Query: 574 RKKWKYLI--LDEAHLIKNWKS 593
++ +++LI DE+HL W++
Sbjct: 208 KENYEFLIKWTDESHLHNTWET 229
Score = 38 (18.4 bits), Expect = 1.1e-81, Sum P(4) = 1.1e-81
Identities = 7/35 (20%), Positives = 18/35 (51%)
Query: 41 VLYKHQMEVDVRKKKALDKQLEFLLGQTERYSSML 75
++ H+++ + + K L+K + L E Y ++
Sbjct: 181 IVINHRLKTSLEEGKVLEKTVPDLNNCKENYEFLI 215
Score = 38 (18.4 bits), Expect = 2.4e-30, Sum P(3) = 2.4e-30
Identities = 11/45 (24%), Positives = 23/45 (51%)
Query: 36 KIEKLVLYKHQMEVDVRKKKALDKQLEFLLG--QTERYSSMLAEN 78
+I+ +L + + +V+ ++ L L QTE Y ++L +N
Sbjct: 589 RIQPFILRRLKKDVEKSLPSKTERILRVELSDVQTEYYKNILTKN 633
Score = 37 (18.1 bits), Expect = 1.4e-81, Sum P(4) = 1.4e-81
Identities = 11/29 (37%), Positives = 14/29 (48%)
Query: 193 DKVGRESSAEMGEDEAEPTVVEEGHVQGN 221
D+ G E S GEDE E E+ G+
Sbjct: 65 DEEGEEDS---GEDEDEEDFEEDDDYYGS 90
Score = 37 (18.1 bits), Expect = 1.4e-81, Sum P(4) = 1.4e-81
Identities = 8/44 (18%), Positives = 21/44 (47%)
Query: 77 ENLVDSHKPVQQSPMREQPGIQYKEADENGAEEPGVQSKEADED 120
+N+ S + + ++ + +E +E+ E+ + E D+D
Sbjct: 43 DNIKQSRRKRMTTIEDDEDEFEDEEGEEDSGEDEDEEDFEEDDD 86
>UNIPROTKB|D4AD08 [details] [associations]
symbol:Chd2 "Chromodomain helicase DNA binding protein 2
(Predicted)" species:10116 "Rattus norvegicus" [GO:0003677 "DNA
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013
PROSITE:PS51194 SMART:SM00298 SMART:SM00490 Pfam:PF00385
GO:GO:0005524 GO:GO:0005634 GO:GO:0003677 EMBL:CH473980
GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780 InterPro:IPR023779
PROSITE:PS00598 InterPro:IPR025260 Pfam:PF13907
GeneTree:ENSGT00560000076896 KO:K11367 CTD:1106 OrthoDB:EOG4QRH36
IPI:IPI00778855 RefSeq:NP_001100993.1 UniGene:Rn.225034
Ensembl:ENSRNOT00000055829 GeneID:308738 KEGG:rno:308738
RGD:1310056 NextBio:659434 Uniprot:D4AD08
Length = 1834
Score = 548 (198.0 bits), Expect = 2.7e-82, Sum P(4) = 2.7e-82
Identities = 116/292 (39%), Positives = 174/292 (59%)
Query: 455 LREYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTIAMLAHLACEKGIWGPHLIVVPTS 514
LR+YQ GL+WL + K + ILADEMGLGKTI TI+ L++L + ++GP LIVVP S
Sbjct: 491 LRDYQLEGLNWLAHSWCKSNSVILADEMGLGKTIQTISFLSYLFHQHQLYGPFLIVVPLS 550
Query: 515 VMLNWETEFLKWCPAFKILTYFGSAKERKFKRQ-GWL----KPNSFHVCITTYRLIIQDS 569
+ +W+ EF W P ++ Y G R R+ W+ K F+ ITTY ++++D
Sbjct: 551 TLTSWQREFEIWAPEVNVVVYIGDLMSRNTIREYEWIHSQTKRLKFNALITTYEILLKDK 610
Query: 570 KVFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPLQNDLMELWSLMHFL 629
V W +L +DEAH +KN S ++TL++F S R+L+TGTPLQN L ELWSL+HF+
Sbjct: 611 TVLGSINWAFLGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSLLHFI 670
Query: 630 MPHIFQSHQEFKDWFCNPISGMVEGQEKVNKEVVDRLHNVLRPFILRRLKRDVEKQLPMK 689
MP F+ ++F++ + G G + LH VL PF+LRR+K+DVEK LP K
Sbjct: 671 MPEKFEFWEDFEE---DHGKGRENGYQS--------LHKVLEPFLLRRVKKDVEKSLPAK 719
Query: 690 QEHVIYCRLSKRQRNLYEDFIASS-ETQATLASANFFGMISVIMQLRKVCNH 740
E ++ +S Q+ Y+ + + + A + G ++++M+L+K CNH
Sbjct: 720 VEQILRVEMSALQKQYYKWILTRNYKALAKGTRGSTSGFLNIVMELKKCCNH 771
Score = 403 (146.9 bits), Expect = 2.7e-82, Sum P(4) = 2.7e-82
Identities = 79/151 (52%), Positives = 110/151 (72%)
Query: 996 GKLQELAILLRKLKSDGHRALIFTQMTKMLDILEEFISLYGYTYMRLDGSTQPEERQTLM 1055
GKL L LL +L+ G+R LIF+QM +MLDIL E++++ Y + RLDGS + E R+ +
Sbjct: 798 GKLILLDKLLTRLRERGNRVLIFSQMVRMLDILAEYLTIKHYPFQRLDGSIKGEIRKQAL 857
Query: 1056 QRFNTN-PKIFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQDRCHRIGQTREV 1114
FN + + F F+LSTR+GG+GINL ADTV+ +DSDWNP D QAQ R HRIGQ ++V
Sbjct: 858 DHFNADGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQV 917
Query: 1115 HIYRLISESTIEENILKKANQKRALDDLVIQ 1145
+IYRL+++ T+EE I+++A +K LD LVIQ
Sbjct: 918 NIYRLVTKGTVEEEIIERAKKKMVLDHLVIQ 948
Score = 48 (22.0 bits), Expect = 2.7e-82, Sum P(4) = 2.7e-82
Identities = 18/83 (21%), Positives = 36/83 (43%)
Query: 54 KKALDKQLEFLLGQTERYSSMLAENLVDSHKPVQQSPMREQPGIQYKEAD--ENGAEEPG 111
K + KQ + G+ ++ S ++ D P +Q+ R + YKE D E +++
Sbjct: 188 KPQVKKQPKIQRGKRKKQESSDDDD-DDDEAPKRQTRRRAAKNVSYKEDDDFETDSDDLI 246
Query: 112 VQSKEADEDDAEQHSGFEPQLDA 134
+ E ++ + E LD+
Sbjct: 247 EMTGEGVDEQQDNSETIEKVLDS 269
Score = 38 (18.4 bits), Expect = 2.7e-82, Sum P(4) = 2.7e-82
Identities = 8/21 (38%), Positives = 10/21 (47%)
Query: 1835 ENHHLKDSQVAENRFRDAARA 1855
E H KD + R DA R+
Sbjct: 1672 EQHWYKDHHYGDRRHMDAHRS 1692
Score = 37 (18.1 bits), Expect = 3.3e-44, Sum P(4) = 3.3e-44
Identities = 9/31 (29%), Positives = 16/31 (51%)
Query: 980 RRQVYFPDRRLIQFDCGKLQELAILLRKLKS 1010
RR ++ + +FD KL +L + K +S
Sbjct: 1537 RRNLWIFVSKFTEFDARKLHKLYKMAHKKRS 1567
>UNIPROTKB|I3LQZ8 [details] [associations]
symbol:CHD2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
InterPro:IPR025260 Pfam:PF13907 GeneTree:ENSGT00560000076896
EMBL:CT954235 EMBL:CU466964 Ensembl:ENSSSCT00000025402
Uniprot:I3LQZ8
Length = 1709
Score = 550 (198.7 bits), Expect = 4.6e-82, Sum P(5) = 4.6e-82
Identities = 117/293 (39%), Positives = 174/293 (59%)
Query: 455 LREYQHIGLDWLVTMYEKRLNG-ILADEMGLGKTIMTIAMLAHLACEKGIWGPHLIVVPT 513
LR+YQ GL+WL + R N ILADEMGLGKTI TI+ L++L + ++GP LIVVP
Sbjct: 472 LRDYQLEGLNWLAHSWCNRSNSVILADEMGLGKTIQTISFLSYLFHQHQLYGPFLIVVPL 531
Query: 514 SVMLNWETEFLKWCPAFKILTYFGSAKERKFKRQ-GWL----KPNSFHVCITTYRLIIQD 568
S + +W+ EF W P ++ Y G R R+ W+ K F+ ITTY ++++D
Sbjct: 532 STLTSWQREFEIWAPEINVVVYIGDLMSRNTIREYEWIHSQTKRLKFNALITTYEILLKD 591
Query: 569 SKVFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPLQNDLMELWSLMHF 628
V W +L +DEAH +KN S ++TL++F S R+L+TGTPLQN L ELWSL+HF
Sbjct: 592 KTVLGSINWAFLGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSLLHF 651
Query: 629 LMPHIFQSHQEFKDWFCNPISGMVEGQEKVNKEVVDRLHNVLRPFILRRLKRDVEKQLPM 688
+MP F+ ++F++ + G G + LH VL PF+LRR+K+DVEK LP
Sbjct: 652 IMPEKFEFWEDFEE---DHGKGRENGYQS--------LHKVLEPFLLRRVKKDVEKSLPA 700
Query: 689 KQEHVIYCRLSKRQRNLYEDFIASS-ETQATLASANFFGMISVIMQLRKVCNH 740
K E ++ +S Q+ Y+ + + + A + G ++++M+L+K CNH
Sbjct: 701 KVEQILRVEMSALQKQYYKWILTRNYKALAKGTRGSTSGFLNIVMELKKCCNH 753
Score = 403 (146.9 bits), Expect = 4.6e-82, Sum P(5) = 4.6e-82
Identities = 79/151 (52%), Positives = 110/151 (72%)
Query: 996 GKLQELAILLRKLKSDGHRALIFTQMTKMLDILEEFISLYGYTYMRLDGSTQPEERQTLM 1055
GKL L LL +L+ G+R LIF+QM +MLDIL E++++ Y + RLDGS + E R+ +
Sbjct: 780 GKLILLDKLLTRLRERGNRVLIFSQMVRMLDILAEYLTIKHYPFQRLDGSIKGEIRKQAL 839
Query: 1056 QRFNTN-PKIFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQDRCHRIGQTREV 1114
FN + + F F+LSTR+GG+GINL ADTV+ +DSDWNP D QAQ R HRIGQ ++V
Sbjct: 840 DHFNADGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQV 899
Query: 1115 HIYRLISESTIEENILKKANQKRALDDLVIQ 1145
+IYRL+++ T+EE I+++A +K LD LVIQ
Sbjct: 900 NIYRLVTKGTVEEEIIERAKKKMVLDHLVIQ 930
Score = 47 (21.6 bits), Expect = 4.6e-82, Sum P(5) = 4.6e-82
Identities = 18/83 (21%), Positives = 36/83 (43%)
Query: 54 KKALDKQLEFLLGQTERYSSMLAENLVDSHKPVQQSPMREQPGIQYKEAD--ENGAEEPG 111
K + KQ + G+ ++ S ++ D P +Q+ R + YKE D E +++
Sbjct: 192 KPRVKKQPKTQRGKRKKQDSSDDDD-EDDEAPKRQTRRRAAKNVSYKEDDDFETDSDDLI 250
Query: 112 VQSKEADEDDAEQHSGFEPQLDA 134
+ E ++ + E LD+
Sbjct: 251 EMTGEGVDEQQDNSETIEKVLDS 273
Score = 43 (20.2 bits), Expect = 4.6e-82, Sum P(5) = 4.6e-82
Identities = 23/112 (20%), Positives = 46/112 (41%)
Query: 1142 LVIQSGGYNTEFFKKLDPMELFSGHRTLPMKTMQKEKAINNGNEVSLSNADVEAAL--KC 1199
L I GY K DP + + LP++T +K + G ++ + AD L K
Sbjct: 1260 LGIYEHGYGNWELIKTDPELKLTDKKILPVETDKKPQ----GKQLQ-TRADYLLKLLRKS 1314
Query: 1200 VEDEADYMALKRAEQEEAVDNQEFTEEAVGRPEDDELVIEDTVRTDEPTDQG 1251
+E E + A+ ++ + +A ++ + +D P+++G
Sbjct: 1315 LEKEGAVTGGEEAKLKKRKPRVKKENKAPRLKDEHGIEFSSPRHSDNPSEEG 1366
Score = 38 (18.4 bits), Expect = 4.6e-82, Sum P(5) = 4.6e-82
Identities = 8/21 (38%), Positives = 10/21 (47%)
Query: 1835 ENHHLKDSQVAENRFRDAARA 1855
E H KD + R DA R+
Sbjct: 1658 EQHWYKDHHYGDRRHMDAHRS 1678
Score = 37 (18.1 bits), Expect = 1.9e-81, Sum P(5) = 1.9e-81
Identities = 8/21 (38%), Positives = 11/21 (52%)
Query: 1170 PMKTMQKEKAINNGNEVSLSN 1190
PMK QK+K E +S+
Sbjct: 1377 PMKKKQKKKENKENKEKQMSS 1397
Score = 37 (18.1 bits), Expect = 5.0e-81, Sum P(5) = 5.0e-81
Identities = 10/38 (26%), Positives = 17/38 (44%)
Query: 199 SSAEMGEDEAEPTVVEEGHVQGNGNDLLAGSKLDTSGS 236
S G D + E+G G+G+ + S ++S S
Sbjct: 24 SEEASGSDSGSQSESEQGSDPGSGHGSESNSSSESSES 61
Score = 37 (18.1 bits), Expect = 1.6e-44, Sum P(4) = 1.6e-44
Identities = 9/31 (29%), Positives = 16/31 (51%)
Query: 980 RRQVYFPDRRLIQFDCGKLQELAILLRKLKS 1010
RR ++ + +FD KL +L + K +S
Sbjct: 1521 RRNLWIFVSKFTEFDARKLHKLYKMAHKKRS 1551
>POMBASE|SPAC1783.05 [details] [associations]
symbol:hrp1 "ATP-dependent DNA helicase Hrp1"
species:4896 "Schizosaccharomyces pombe" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0000779 "condensed chromosome, centromeric
region" evidence=IDA] [GO:0000790 "nuclear chromatin" evidence=IC]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0004003 "ATP-dependent
DNA helicase activity" evidence=ISM] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0006338 "chromatin remodeling"
evidence=IMP] [GO:0006369 "termination of RNA polymerase II
transcription" evidence=IMP] [GO:0007076 "mitotic chromosome
condensation" evidence=IMP] [GO:0008094 "DNA-dependent ATPase
activity" evidence=IDA] [GO:0016592 "mediator complex"
evidence=IPI] [GO:0030466 "chromatin silencing at silent
mating-type cassette" evidence=IMP] [GO:0030702 "chromatin
silencing at centromere" evidence=IMP] [GO:0035067 "negative
regulation of histone acetylation" evidence=IMP] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IMP] [GO:0048096 "chromatin-mediated maintenance
of transcription" evidence=TAS] [GO:0060303 "regulation of
nucleosome density" evidence=IMP] InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298
SMART:SM00490 PomBase:SPAC1783.05 Pfam:PF00385 GO:GO:0005524
EMBL:CU329670 GenomeReviews:CU329670_GR GO:GO:0003677 GO:GO:0045944
GO:GO:0030466 GO:GO:0000122 GO:GO:0000790 GO:GO:0030702
GO:GO:0004003 GO:GO:0007076 GO:GO:0048096 InterPro:IPR016197
SUPFAM:SSF54160 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0000779 GO:GO:0035067 InterPro:IPR023780
PROSITE:PS00598 GO:GO:0016592 GO:GO:0006369 KO:K11367
HOGENOM:HOG000207917 OrthoDB:EOG4TF3TB EMBL:X99021 EMBL:AB027852
PIR:T43334 PIR:T50107 RefSeq:NP_593660.1 ProteinModelPortal:Q9US25
MINT:MINT-4979817 STRING:Q9US25 EnsemblFungi:SPAC1783.05.1
GeneID:2542363 KEGG:spo:SPAC1783.05 OMA:VERVIKW NextBio:20803422
GO:GO:0060303 Uniprot:Q9US25
Length = 1373
Score = 516 (186.7 bits), Expect = 6.8e-82, Sum P(3) = 6.8e-82
Identities = 113/300 (37%), Positives = 174/300 (58%)
Query: 455 LREYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTIAMLAHLACEKGIWGPHLIVVPTS 514
+R++Q G++W+ ++ + NGILADEMGLGKT+ T+ L++L GP LIVVP S
Sbjct: 390 IRDFQLTGINWMAYLWHRNENGILADEMGLGKTVQTVCFLSYLVHSLKQHGPFLIVVPLS 449
Query: 515 VMLNWETEFLKWCPAFKILTYFGSAKERKFKRQG--WLKPNS----FHVCITTYRLIIQD 568
+ W+ W P + Y G+ + R R+ +L NS F++ +TTY I++D
Sbjct: 450 TVPAWQETLANWTPDLNSICYTGNTESRANIREYEFYLSTNSRKLKFNILLTTYEYILKD 509
Query: 569 SKVFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPLQNDLMELWSLMHF 628
+ +W+YL +DEAH +KN +S ++TL F + R+L+TGTPLQN+L EL SL++F
Sbjct: 510 KQELNNIRWQYLAIDEAHRLKNSESSLYETLSQFRTANRLLITGTPLQNNLKELASLVNF 569
Query: 629 LMPHIFQSHQEFKDWFCNPISGMVEGQEKVNKEVVDRLHNVLRPFILRRLKRDVEKQLPM 688
LMP F E F P + QE+ +++ +RL +PFILRRLK+DVEK LP
Sbjct: 570 LMPGKFYIRDELN--FDQPNAE----QERDIRDLQERL----QPFILRRLKKDVEKSLPS 619
Query: 689 KQEHVIYCRLSKRQRNLYEDFIASSETQAT--LASANFFGMISVIMQLRKVCNHPDLFEG 746
K E ++ LS Q Y++ + + T +++++++L+KV NHP LF G
Sbjct: 620 KSERILRVELSDMQTEWYKNILTKNYRALTGHTDGRGQLSLLNIVVELKKVSNHPYLFPG 679
Score = 414 (150.8 bits), Expect = 6.8e-82, Sum P(3) = 6.8e-82
Identities = 110/286 (38%), Positives = 155/286 (54%)
Query: 969 PLLFP--IRPAIVRRQVYFPDR-RLIQFDCGKLQELAILLRKLKSDGHRALIFTQMTKML 1025
P LFP ++ R++ D R I + GK+ L LL++LK DGHR LIF+QM +ML
Sbjct: 674 PYLFPGAAEKWMMGRKMTREDTLRGIIMNSGKMVLLDKLLQRLKHDGHRVLIFSQMVRML 733
Query: 1026 DILEEFISLYGYTYMRLDGSTQPEERQTLMQRFNT--NPKIFLFILSTRSGGVGINLVGA 1083
+IL E++SL GY Y RLDG+ R+ + FN +P F+F+LSTR+GG+GINL A
Sbjct: 734 NILGEYMSLRGYNYQRLDGTIPASVRRVSIDHFNAPDSPD-FVFLLSTRAGGLGINLNTA 792
Query: 1084 DTVIFYDSDWNPAMDQQAQDRCHRIGQTREVHIYRLISESTIEENILKKANQKRALDDLV 1143
DTVI +DSDWNP D QA R HRIGQ V++YR +S+ T+EE+IL++A +K L+ +
Sbjct: 793 DTVIIFDSDWNPQADLQAMARAHRIGQKNHVNVYRFLSKDTVEEDILERARRKMILEYAI 852
Query: 1144 IQSGGYNTEFFKKLDPMELFSGHRTLPMKTMQKEKAINNGNEVSLSNADVEAALKCVEDE 1203
I G K D + L KA N + L N +++ L ED
Sbjct: 853 ISLGVTEKSKNSKNDKYDAQELSAILKFGASNMFKATEN--QKKLENMNLDDILSHAEDR 910
Query: 1204 ADYMALKRAEQ--EEAVDNQEFTE-EAVGRPEDDELVIEDTVRTDE 1246
+ A EE + E T+ +A DD + E+ R +E
Sbjct: 911 DSSNDVGGASMGGEEFLKQFEVTDYKAEDLNWDDIIPEEEMERIEE 956
Score = 46 (21.3 bits), Expect = 6.8e-82, Sum P(3) = 6.8e-82
Identities = 15/41 (36%), Positives = 23/41 (56%)
Query: 249 SISENHLLDIETSQVRDTSKKSGASTQKQALYD-FSDEQED 288
SI+ +I TS +R + KS + +Q YD F DE+E+
Sbjct: 158 SINSASGTEIRTS-LRSSKGKS-VNYNEQEFYDDFEDEEEE 196
Score = 45 (20.9 bits), Expect = 2.8e-43, Sum P(3) = 2.8e-43
Identities = 10/33 (30%), Positives = 19/33 (57%)
Query: 1194 EAALKCVEDEADYMALKRAEQEEAVDNQEFTEE 1226
E ++ +E+E +A +RA++EE +E E
Sbjct: 948 EEEMERIEEEERMLAAQRAKEEERERREEEERE 980
Score = 42 (19.8 bits), Expect = 1.4e-32, Sum P(2) = 1.4e-32
Identities = 16/66 (24%), Positives = 25/66 (37%)
Query: 26 ISKDVKKFWMKIEKLVLYKHQMEVDVR-KKKALDKQLEFLLGQTERYSSMLAENLVDSHK 84
+ KDV+K + +L ++ K L K L G T+ + N+V K
Sbjct: 609 LKKDVEKSLPSKSERILRVELSDMQTEWYKNILTKNYRALTGHTDGRGQLSLLNIVVELK 668
Query: 85 PVQQSP 90
V P
Sbjct: 669 KVSNHP 674
Score = 40 (19.1 bits), Expect = 9.3e-43, Sum P(3) = 9.3e-43
Identities = 14/53 (26%), Positives = 27/53 (50%)
Query: 1446 KAVKEEPSVEPMSIDDDF-YDEDATFSDAMSPPSTSQKK-RKKAELALYDDEE 1496
KA + + +E M++DD + ED S+ + S ++ K+ E+ Y E+
Sbjct: 887 KATENQKKLENMNLDDILSHAEDRDSSNDVGGASMGGEEFLKQFEVTDYKAED 939
>UNIPROTKB|F1SA77 [details] [associations]
symbol:CHD2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
InterPro:IPR025260 Pfam:PF13907 GeneTree:ENSGT00560000076896
OMA:AHSWCKN EMBL:CT954235 EMBL:CU466964 Ensembl:ENSSSCT00000002524
Uniprot:F1SA77
Length = 1831
Score = 549 (198.3 bits), Expect = 1.0e-81, Sum P(5) = 1.0e-81
Identities = 116/292 (39%), Positives = 174/292 (59%)
Query: 455 LREYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTIAMLAHLACEKGIWGPHLIVVPTS 514
LR+YQ GL+WL + K + ILADEMGLGKTI TI+ L++L + ++GP LIVVP S
Sbjct: 486 LRDYQLEGLNWLAHSWCKSNSVILADEMGLGKTIQTISFLSYLFHQHQLYGPFLIVVPLS 545
Query: 515 VMLNWETEFLKWCPAFKILTYFGSAKERKFKRQ-GWL----KPNSFHVCITTYRLIIQDS 569
+ +W+ EF W P ++ Y G R R+ W+ K F+ ITTY ++++D
Sbjct: 546 TLTSWQREFEIWAPEINVVVYIGDLMSRNTIREYEWIHSQTKRLKFNALITTYEILLKDK 605
Query: 570 KVFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPLQNDLMELWSLMHFL 629
V W +L +DEAH +KN S ++TL++F S R+L+TGTPLQN L ELWSL+HF+
Sbjct: 606 TVLGSINWAFLGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSLLHFI 665
Query: 630 MPHIFQSHQEFKDWFCNPISGMVEGQEKVNKEVVDRLHNVLRPFILRRLKRDVEKQLPMK 689
MP F+ ++F++ + G G + LH VL PF+LRR+K+DVEK LP K
Sbjct: 666 MPEKFEFWEDFEE---DHGKGRENGYQS--------LHKVLEPFLLRRVKKDVEKSLPAK 714
Query: 690 QEHVIYCRLSKRQRNLYEDFIASS-ETQATLASANFFGMISVIMQLRKVCNH 740
E ++ +S Q+ Y+ + + + A + G ++++M+L+K CNH
Sbjct: 715 VEQILRVEMSALQKQYYKWILTRNYKALAKGTRGSTSGFLNIVMELKKCCNH 766
Score = 403 (146.9 bits), Expect = 1.0e-81, Sum P(5) = 1.0e-81
Identities = 79/151 (52%), Positives = 110/151 (72%)
Query: 996 GKLQELAILLRKLKSDGHRALIFTQMTKMLDILEEFISLYGYTYMRLDGSTQPEERQTLM 1055
GKL L LL +L+ G+R LIF+QM +MLDIL E++++ Y + RLDGS + E R+ +
Sbjct: 793 GKLILLDKLLTRLRERGNRVLIFSQMVRMLDILAEYLTIKHYPFQRLDGSIKGEIRKQAL 852
Query: 1056 QRFNTN-PKIFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQDRCHRIGQTREV 1114
FN + + F F+LSTR+GG+GINL ADTV+ +DSDWNP D QAQ R HRIGQ ++V
Sbjct: 853 DHFNADGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQV 912
Query: 1115 HIYRLISESTIEENILKKANQKRALDDLVIQ 1145
+IYRL+++ T+EE I+++A +K LD LVIQ
Sbjct: 913 NIYRLVTKGTVEEEIIERAKKKMVLDHLVIQ 943
Score = 47 (21.6 bits), Expect = 1.0e-81, Sum P(5) = 1.0e-81
Identities = 18/83 (21%), Positives = 36/83 (43%)
Query: 54 KKALDKQLEFLLGQTERYSSMLAENLVDSHKPVQQSPMREQPGIQYKEAD--ENGAEEPG 111
K + KQ + G+ ++ S ++ D P +Q+ R + YKE D E +++
Sbjct: 187 KPRVKKQPKTQRGKRKKQDSSDDDD-EDDEAPKRQTRRRAAKNVSYKEDDDFETDSDDLI 245
Query: 112 VQSKEADEDDAEQHSGFEPQLDA 134
+ E ++ + E LD+
Sbjct: 246 EMTGEGVDEQQDNSETIEKVLDS 268
Score = 43 (20.2 bits), Expect = 1.0e-81, Sum P(5) = 1.0e-81
Identities = 23/112 (20%), Positives = 46/112 (41%)
Query: 1142 LVIQSGGYNTEFFKKLDPMELFSGHRTLPMKTMQKEKAINNGNEVSLSNADVEAAL--KC 1199
L I GY K DP + + LP++T +K + G ++ + AD L K
Sbjct: 1273 LGIYEHGYGNWELIKTDPELKLTDKKILPVETDKKPQ----GKQLQ-TRADYLLKLLRKS 1327
Query: 1200 VEDEADYMALKRAEQEEAVDNQEFTEEAVGRPEDDELVIEDTVRTDEPTDQG 1251
+E E + A+ ++ + +A ++ + +D P+++G
Sbjct: 1328 LEKEGAVTGGEEAKLKKRKPRVKKENKAPRLKDEHGIEFSSPRHSDNPSEEG 1379
Score = 38 (18.4 bits), Expect = 1.0e-81, Sum P(5) = 1.0e-81
Identities = 8/21 (38%), Positives = 10/21 (47%)
Query: 1835 ENHHLKDSQVAENRFRDAARA 1855
E H KD + R DA R+
Sbjct: 1669 EQHWYKDHHYGDRRHMDAHRS 1689
Score = 37 (18.1 bits), Expect = 4.4e-81, Sum P(5) = 4.4e-81
Identities = 8/21 (38%), Positives = 11/21 (52%)
Query: 1170 PMKTMQKEKAINNGNEVSLSN 1190
PMK QK+K E +S+
Sbjct: 1390 PMKKKQKKKENKENKEKQMSS 1410
Score = 37 (18.1 bits), Expect = 1.1e-80, Sum P(5) = 1.1e-80
Identities = 10/38 (26%), Positives = 17/38 (44%)
Query: 199 SSAEMGEDEAEPTVVEEGHVQGNGNDLLAGSKLDTSGS 236
S G D + E+G G+G+ + S ++S S
Sbjct: 24 SEEASGSDSGSQSESEQGSDPGSGHGSESNSSSESSES 61
Score = 37 (18.1 bits), Expect = 3.2e-44, Sum P(4) = 3.2e-44
Identities = 9/31 (29%), Positives = 16/31 (51%)
Query: 980 RRQVYFPDRRLIQFDCGKLQELAILLRKLKS 1010
RR ++ + +FD KL +L + K +S
Sbjct: 1533 RRNLWIFVSKFTEFDARKLHKLYKMAHKKRS 1563
>DICTYBASE|DDB_G0293012 [details] [associations]
symbol:DDB_G0293012 "CHR group protein" species:44689
"Dictyostelium discoideum" [GO:0005634 "nucleus" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0004003 "ATP-dependent DNA helicase activity"
evidence=ISS] InterPro:IPR000330 InterPro:IPR000626
InterPro:IPR000953 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00213 SMART:SM00298
SMART:SM00490 dictyBase:DDB_G0293012 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0006357 GO:GO:0004003
InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
EMBL:AAFI02000199 InterPro:IPR022617 Pfam:PF11976
RefSeq:XP_629261.1 ProteinModelPortal:Q54CF8
EnsemblProtists:DDB0220643 GeneID:8628981 KEGG:ddi:DDB_G0293012
InParanoid:Q54CF8 OMA:IMINEDI Uniprot:Q54CF8
Length = 3071
Score = 530 (191.6 bits), Expect = 7.7e-81, Sum P(5) = 7.7e-81
Identities = 125/321 (38%), Positives = 178/321 (55%)
Query: 432 QPTGITFSTTQVRTKFPFLLKFPLREYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTI 491
+PT + ++ KF L L+E+Q G WL + + +LADEMGLGKTI +I
Sbjct: 877 RPTKLPIFNNELVPKFQDNLS--LKEFQVEGFLWLSYCWYHCRSSLLADEMGLGKTIQSI 934
Query: 492 AMLAHLACEKGIWGPHLIVVPTSVMLNWETEFLKWCPAFKILTYFGSAKERKFKRQGWLK 551
A L +L+ GI GP L+V P S + NW E LKW K L ++GS + R F + K
Sbjct: 935 AFLQYLSQSVGIKGPFLVVAPLSTLGNWHKEILKWTK-MKTLVFYGSQETRGFISKYEFK 993
Query: 552 PNS---FHVCITTYRLIIQDSKVFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRI 608
F V +TTY I+ D F R W+ LILDE H IKN KS+ L + ++ I
Sbjct: 994 HKDTYLFEVLLTTYETIMSDHSSFVRVPWRALILDEGHRIKNDKSKVLSKLKSIKTEHSI 1053
Query: 609 LLTGTPLQNDLMELWSLMHFLMPHIFQSHQEFKDWFCNPISGMVEGQEKVNKEVVDRLHN 668
+LTGTPLQND+ ELW++++FL P F S QEF D + S + E + V +LH
Sbjct: 1054 ILTGTPLQNDMKELWTMLNFLDPDKFNSCQEFLDEY----SDLKEESQ------VSKLHQ 1103
Query: 669 VLRPFILRRLKRDVEKQLPMKQEHVIYCRLSKRQRNLYEDFIASSE---TQATLASANFF 725
+L P++LRR+K DVE +P+K+E VI LS Q+ Y + + ++ N
Sbjct: 1104 LLSPYLLRRMKEDVELSIPIKEETVIQVELSSTQKTYYRAILERNREFLSRGIKQKTNLP 1163
Query: 726 GMISVIMQLRKVCNHPDLFEG 746
+ ++++Q+RKVCNHP L G
Sbjct: 1164 KLSNIMIQIRKVCNHPFLIPG 1184
Score = 402 (146.6 bits), Expect = 7.7e-81, Sum P(5) = 7.7e-81
Identities = 86/183 (46%), Positives = 119/183 (65%)
Query: 969 PLLFP-IRPAIVRRQVYFPDRRLIQF---DCGKLQELAILLRKLKSDGHRALIFTQMTKM 1024
P L P +IV+++ D L + KL + LL++LK++GH+ LIF+QM +
Sbjct: 1179 PFLIPGAEESIVKQEKIAGDEELGELLVKSSSKLVLVDKLLQRLKAEGHQVLIFSQMVES 1238
Query: 1025 LDILEEFISLYGYTYMRLDGSTQPEERQTLMQRF-NTNPKIFLFILSTRSGGVGINLVGA 1083
L+ILE+++ YTY RLDGS + E RQ + RF + F+F+LSTR+GGVGINL A
Sbjct: 1239 LNILEDYLQYREYTYERLDGSIKSEVRQASIDRFQDKGANRFVFLLSTRAGGVGINLTTA 1298
Query: 1084 DTVIFYDSDWNPAMDQQAQDRCHRIGQTREVHIYRLISESTIEENILKKANQKRALDDLV 1143
DTVI +DSDWNP D QAQ RCHRIGQT V +YRLI+ +T EE + + A +K LD +V
Sbjct: 1299 DTVILFDSDWNPQSDLQAQARCHRIGQTNNVKVYRLITRNTYEEYLFECATKKLLLDHIV 1358
Query: 1144 IQS 1146
+ +
Sbjct: 1359 LST 1361
Score = 59 (25.8 bits), Expect = 7.7e-81, Sum P(5) = 7.7e-81
Identities = 17/71 (23%), Positives = 35/71 (49%)
Query: 55 KALDKQLEFLLGQTERYSSMLAENLVDSHKPVQQSPM-REQPGIQYKEADENGAEEPGVQ 113
K + Q E+ L ++ + N + KP+ Q P+ + +P + K +E EE +
Sbjct: 158 KTEELQDEYTLESSDDDDTSKKSN--NDEKPLPQPPVNKNKPNKKLKNDNEGENEEDEEE 215
Query: 114 SKEADEDDAEQ 124
+E +E++ E+
Sbjct: 216 EEEEEEEEEEE 226
Score = 51 (23.0 bits), Expect = 6.7e-80, Sum P(5) = 6.7e-80
Identities = 29/145 (20%), Positives = 64/145 (44%)
Query: 1120 ISESTIEENILKKANQKRALDDLVIQSGGYNTEFFKKLDPMELFSGHRTLP-MKTMQKEK 1178
IS ++EN K N ++ D + + + K D + ++ K+ EK
Sbjct: 1909 ISSDKVDENKEKVENNEKVNVDEKSKDNEKSNDSEKSKDNEKSKDDEKSKDDEKSKDDEK 1968
Query: 1179 AINN--GNEVSLSNADVEAALKCVEDEADYMAL-KRAEQEEAVDNQ--EFTEEAVG--RP 1231
+ ++ + S D ++ L+ +DE+ M + K ++ + + Q E EE +P
Sbjct: 1969 SQDDEKSKDDEKSKDDEKSKLEENQDESTPMEVDKESKSTSSSEKQSIEIKEEKESEKKP 2028
Query: 1232 EDDELVIEDTVRTDEPTDQGGCMTA 1256
+D++ E+ V++ T+ +T+
Sbjct: 2029 QDNDNATENGVKSPSTTNTDSKLTS 2053
Score = 49 (22.3 bits), Expect = 7.7e-81, Sum P(5) = 7.7e-81
Identities = 30/142 (21%), Positives = 50/142 (35%)
Query: 1443 SESKAVKEEPSVEPMSIDDD-FYDEDATFSDAMSPPSTSQKKRKKAELALYDDEEREXXX 1501
SE E+ + S DD+ D++ + D S K +K++L DE
Sbjct: 1942 SEKSKDNEKSKDDEKSKDDEKSKDDEKSQDDEKSKDDEKSKDDEKSKLEENQDESTPMEV 2001
Query: 1502 XXXXXXXXXXXPVRSPDSDSKLSRKR---HDGSTE--LKTCESIFIDLEQKSASRSKMGG 1556
+ K S K+ +D +TE +K+ + D + S S +
Sbjct: 2002 DKESKSTSSSEKQSIEIKEEKESEKKPQDNDNATENGVKSPSTTNTDSKLTSPSTATTTT 2061
Query: 1557 KISITAMPVKRVLM-IKPEKLK 1577
+ T P +KP LK
Sbjct: 2062 TTTTTTTPTTTTATTVKPLSLK 2083
Score = 48 (22.0 bits), Expect = 7.7e-81, Sum P(5) = 7.7e-81
Identities = 16/59 (27%), Positives = 28/59 (47%)
Query: 1164 SGHRTLPMKTMQKEKAINNGNEVSLSNADVEAALKCVEDEADYMALKRAEQEEAVDNQE 1222
S + +K +KEK+ + S SN + + K + E + + K E +E V+N E
Sbjct: 1870 SNDKETQIKVEEKEKSTESK---SSSNDEKDVCEKVEKGEKEISSDKVDENKEKVENNE 1925
Score = 43 (20.2 bits), Expect = 3.2e-80, Sum P(5) = 3.2e-80
Identities = 23/113 (20%), Positives = 46/113 (40%)
Query: 1826 ETSVNKSTRENHHLKDSQVAENRFRDAARACIEDSLGWASSAFPANDAKLRSVPKSQSLG 1885
+ +V++ +++N DS+ +++ + +D +D K + KS+
Sbjct: 1926 KVNVDEKSKDNEKSNDSEKSKDNEKSKDDEKSKDDEKSKDDEKSQDDEKSKDDEKSKDDE 1985
Query: 1886 KHKLSLSDSVKCPK---------SKLRKTSMEHSEIQHSSPEPVSNQSVATKD 1929
K KL + P S K S+E E + S +P N + AT++
Sbjct: 1986 KSKLEENQDESTPMEVDKESKSTSSSEKQSIEIKEEKESEKKPQDNDN-ATEN 2037
Score = 41 (19.5 bits), Expect = 1.7e-79, Sum P(5) = 1.7e-79
Identities = 10/32 (31%), Positives = 17/32 (53%)
Query: 1461 DDFYDE--DATFSDAMSPPSTSQKKRKKAELA 1490
DD + E D T + +PP +K KK++ +
Sbjct: 1654 DDQHVETLDNTVNSLSNPPLKQRKSEKKSQFS 1685
Score = 40 (19.1 bits), Expect = 5.1e-41, Sum P(5) = 5.1e-41
Identities = 15/61 (24%), Positives = 30/61 (49%)
Query: 1121 SESTIEENILKKANQKRALDDLVIQSGGYNTEFFKKLDPMEL-FSGHRTLPMKTMQKEKA 1179
S ST + +L + Q RA+ LV T++ K+L + + + +P T + +K+
Sbjct: 2168 SFSTRVQTVLTRLVQMRAIKQLV-------TKYGKQLTNLSIPYISRGPIPTWTQENDKS 2220
Query: 1180 I 1180
+
Sbjct: 2221 L 2221
Score = 39 (18.8 bits), Expect = 9.1e-30, Sum P(5) = 9.1e-30
Identities = 8/23 (34%), Positives = 10/23 (43%)
Query: 807 TPASLIKERADLNNLEEVGPFCT 829
TP IK ++ N P CT
Sbjct: 784 TPPPAIKNESEANPFNYFSPDCT 806
Score = 37 (18.1 bits), Expect = 6.7e-80, Sum P(5) = 6.7e-80
Identities = 14/44 (31%), Positives = 19/44 (43%)
Query: 1517 PDSDSKLSRKRHDGSTELKTCESIFIDLEQKSASRSKM-GGKIS 1559
P ++ ++ H GS + K F D SRS GG IS
Sbjct: 2375 PGQQNQQTQHGHSGSHKQKYSNDYFDDF----VSRSDFSGGDIS 2414
Score = 37 (18.1 bits), Expect = 2.7e-78, Sum P(6) = 2.7e-78
Identities = 10/39 (25%), Positives = 16/39 (41%)
Query: 1233 DDELVIEDTVRTDEPTDQGGCMTANNDNGMMLTGNDPKE 1271
D EL + V+ +P T+NND N+ +
Sbjct: 2239 DPELDLLSNVKRGQPNTFSPNPTSNNDQNNNNNNNNSNQ 2277
>WB|WBGene00010369 [details] [associations]
symbol:chd-1 species:6239 "Caenorhabditis elegans"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0009792 "embryo development ending in
birth or egg hatching" evidence=IMP] InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR002464
Pfam:PF00176 Pfam:PF00271 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS51194 SMART:SM00298 SMART:SM00490 Pfam:PF00385
GO:GO:0005524 GO:GO:0005634 GO:GO:0009792 GO:GO:0003677
InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
InterPro:IPR025260 Pfam:PF13907 GeneTree:ENSGT00560000076896
KO:K11367 HOGENOM:HOG000207917 OMA:VERVIKW EMBL:Z92970 PIR:T23056
RefSeq:NP_491994.2 ProteinModelPortal:O17909 SMR:O17909
STRING:O17909 PaxDb:O17909 EnsemblMetazoa:H06O01.2 GeneID:172432
KEGG:cel:CELE_H06O01.2 UCSC:H06O01.2 CTD:172432 WormBase:H06O01.2
InParanoid:O17909 NextBio:875487 Uniprot:O17909
Length = 1461
Score = 528 (190.9 bits), Expect = 1.1e-80, Sum P(4) = 1.1e-80
Identities = 108/295 (36%), Positives = 167/295 (56%)
Query: 455 LREYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTIAMLAHLACEKGIWGPHLIVVPTS 514
LR+YQ GL+W+V + K + ILADEMGLGKTI +I++LA L + GP+L+VVP S
Sbjct: 405 LRDYQLEGLNWMVYAWCKGNSSILADEMGLGKTIQSISLLASLFHRYDLAGPYLVVVPLS 464
Query: 515 VMLNWETEFLKWCPAFKILTYFGSAKERKFKRQ-----GWLKPNSFHVCITTYRLIIQDS 569
M W+ EF +W P ++ Y G R RQ G K + +TTY ++++D
Sbjct: 465 TMAAWQKEFAQWAPEMNLVVYMGDVVSRDMIRQYEWFVGGTKKMKINAILTTYEILLKDK 524
Query: 570 KVFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPLQNDLMELWSLMHFL 629
W L++DEAH +KN +S +++L F ++L+TGTPLQN L ELW+L+HF+
Sbjct: 525 AFLSSIDWAALLVDEAHRLKNDESLLYKSLTQFRFNHKLLITGTPLQNSLKELWALLHFI 584
Query: 630 MPHIFQSHQEFKDWFCNPISGMVEGQEKVNKEVVDRLHNVLRPFILRRLKRDVEKQLPMK 689
MP F +EF+ + N + + LH L PF+LRR+K+DVEK LP K
Sbjct: 585 MPEKFDCWEEFET-----------AHNESNHKGISALHKKLEPFLLRRVKKDVEKSLPPK 633
Query: 690 QEHVIYCRLSKRQRNLYEDFIASSETQATLA-SANFFGMISVIMQLRKVCNHPDL 743
E ++ ++ Q+ Y+ + + + + + G ++++M+L+K CNH L
Sbjct: 634 TEQILRVDMTAHQKQFYKWILTKNYRELSKGVKGSINGFVNLVMELKKCCNHASL 688
Score = 393 (143.4 bits), Expect = 1.1e-80, Sum P(4) = 1.1e-80
Identities = 106/287 (36%), Positives = 151/287 (52%)
Query: 996 GKLQELAILLRKLKSDGHRALIFTQMTKMLDILEEFISLYGYTYMRLDGSTQPEERQTLM 1055
GKL L LL +LK GHR LIF+QM MLDIL+E++ L + RLDGS + + R+ +
Sbjct: 711 GKLILLDKLLCRLKDKGHRVLIFSQMVMMLDILQEYLQLRRFPSQRLDGSMRADLRKQAL 770
Query: 1056 QRFNTNPKI-FLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQDRCHRIGQTREV 1114
+N F F+LSTR+GG+GINL ADTVI +DSDWNP D QA R HRIGQT+ V
Sbjct: 771 DHYNAPGSTDFAFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMSRAHRIGQTKTV 830
Query: 1115 HIYRLISESTIEENILKKANQKRALDDLVIQSGGYNTEFFKKLDPMELFSGHRTLPMKTM 1174
+IYRL+++ ++EE I+++A +K LD LVIQ +T L SG ++P
Sbjct: 831 NIYRLVTKGSVEEEIVERAKRKLVLDHLVIQR--MDTTGKTVLSKNATASG--SVPFDK- 885
Query: 1175 QKEKAINNGNEVSLSNADVEAALKCVEDEADYMALKRAEQEEAVDNQEFTEEAVGRPEDD 1234
Q+ AI V L + E + E + D + L AE EA + E + +
Sbjct: 886 QELSAILKFGAVELFK-EKEGEEQEPEVDIDRI-LMGAETREAEEEVMKENELLSSFKYA 943
Query: 1235 ELVIEDTVRTDEPTDQGGCMTANNDNGMMLTGNDPKEERALTFAAKE 1281
I++ TD+ + D +L KE + A ++
Sbjct: 944 NFAIDEEKDIAAATDEWAAIIPEEDRNRILEEERMKELAEMNLAPRQ 990
Score = 50 (22.7 bits), Expect = 1.1e-80, Sum P(4) = 1.1e-80
Identities = 16/53 (30%), Positives = 31/53 (58%)
Query: 37 IEKLVLY-KHQMEVDVRKKKALDKQLEFLLGQTERYSSMLAENLVDSHKPVQQ 88
++K+ Y K Q EV++ K+ A + +EF + E+ +AE L + +K V++
Sbjct: 267 LKKVQNYVKKQKEVEMWKRSADKEYIEFF--ECEQ---QMAEELCEEYKKVER 314
Score = 45 (20.9 bits), Expect = 1.1e-80, Sum P(4) = 1.1e-80
Identities = 14/47 (29%), Positives = 22/47 (46%)
Query: 1441 LTSESKAVKEEPSVEPMSIDDDFYDEDATFSDAMSPPSTSQKKRKKA 1487
L + A ++ P ++DD D+D D T +KK+KKA
Sbjct: 981 LAEMNLAPRQRKQPIPQVVEDDDGDDDEEEDD------TGKKKKKKA 1021
Score = 38 (18.4 bits), Expect = 4.5e-29, Sum P(3) = 4.5e-29
Identities = 6/24 (25%), Positives = 13/24 (54%)
Query: 585 AHLIKNWKSQRWQTLLNFNSKRRI 608
+HL W+S+ L+N +++
Sbjct: 247 SHLHNTWESENSLALMNAKGLKKV 270
>UNIPROTKB|E2QUI5 [details] [associations]
symbol:CHD1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
InterPro:IPR025260 Pfam:PF13907 CTD:1105
GeneTree:ENSGT00560000076896 KO:K11367 EMBL:AAEX03002026
RefSeq:XP_848459.1 Ensembl:ENSCAFT00000012332 GeneID:488891
KEGG:cfa:488891 NextBio:20862162 Uniprot:E2QUI5
Length = 1711
Score = 526 (190.2 bits), Expect = 2.6e-80, Sum P(4) = 2.6e-80
Identities = 111/292 (38%), Positives = 169/292 (57%)
Query: 455 LREYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTIAMLAHLACEKGIWGPHLIVVPTS 514
LR+YQ GL+WL + K + ILADEMGLGKTI TI+ L +L E ++GP L+VVP S
Sbjct: 480 LRDYQLNGLNWLAHSWCKGNSCILADEMGLGKTIQTISFLNYLFHEHQLYGPFLLVVPLS 539
Query: 515 VMLNWETEFLKWCPAFKILTYFGSAKERKFKR-QGWLKPNS----FHVCITTYRLIIQDS 569
+ +W+ E W + Y G R R W+ P + F++ +TTY ++++D
Sbjct: 540 TLTSWQREIQTWASQMNAVVYLGDINSRNMIRTHEWMHPQTKRLKFNILLTTYEILLKDK 599
Query: 570 KVFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPLQNDLMELWSLMHFL 629
W ++ +DEAH +KN S ++TL++F S R+L+TGTPLQN L ELWSL+HF+
Sbjct: 600 AFLGGLNWAFIGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSLLHFI 659
Query: 630 MPHIFQSHQEFKDWFCNPISGMVEGQEKVNKEVVDRLHNVLRPFILRRLKRDVEKQLPMK 689
MP F S ++F++ G G ++KE L PF+LRR+K+DVEK LP K
Sbjct: 660 MPEKFSSWEDFEE---EHGKGREYGYASLHKE--------LEPFLLRRVKKDVEKSLPAK 708
Query: 690 QEHVIYCRLSKRQRNLYEDFIASSETQATLAS-ANFFGMISVIMQLRKVCNH 740
E ++ +S Q+ Y+ + + + S + G ++++M+L+K CNH
Sbjct: 709 VEQILRMEMSALQKQYYKWILTRNYKALSKGSKGSTSGFLNIMMELKKCCNH 760
Score = 391 (142.7 bits), Expect = 2.6e-80, Sum P(4) = 2.6e-80
Identities = 78/151 (51%), Positives = 108/151 (71%)
Query: 996 GKLQELAILLRKLKSDGHRALIFTQMTKMLDILEEFISLYGYTYMRLDGSTQPEERQTLM 1055
GKL L LL +L+ G+R LIF+QM +MLDIL E++ + + RLDGS + E R+ +
Sbjct: 787 GKLILLDKLLIRLRERGNRVLIFSQMVRMLDILAEYLKYRQFPFQRLDGSIKGELRKQAL 846
Query: 1056 QRFNTN-PKIFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQDRCHRIGQTREV 1114
FN + F F+LSTR+GG+GINL ADTV+ +DSDWNP D QAQ R HRIGQ ++V
Sbjct: 847 DHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQV 906
Query: 1115 HIYRLISESTIEENILKKANQKRALDDLVIQ 1145
+IYRL+++ ++EE+IL++A +K LD LVIQ
Sbjct: 907 NIYRLVTKGSVEEDILERAKKKMVLDHLVIQ 937
Score = 51 (23.0 bits), Expect = 2.6e-80, Sum P(4) = 2.6e-80
Identities = 18/72 (25%), Positives = 30/72 (41%)
Query: 198 ESSAEMGEDEAEPTVVEEGHVQGNGNDLLAGSKLDTSGSLVRRCDEINGGLSISENHLLD 257
E S E+ + + G G+G+ +GS D S S D +G S S++ +
Sbjct: 7 EESVRNSSGESSQSDDDSGSASGSGSGSSSGSSSDGSSSQSGSSDSDSGSESGSQSES-E 65
Query: 258 IETSQVRDTSKK 269
+TS+ K
Sbjct: 66 SDTSRENKVQAK 77
Score = 49 (22.3 bits), Expect = 2.6e-80, Sum P(4) = 2.6e-80
Identities = 12/55 (21%), Positives = 28/55 (50%)
Query: 1563 MPVKRVLMIKPEKLKKGNVWSRDCVPSPDV-WLPQEDAILCAVVHEYG-PNWSLV 1615
+P+ + + PE+ K+ + D+ W ++D+ L ++EYG +W ++
Sbjct: 1221 IPLHKSIPSDPEERKQYTIPCHTKAAHFDIDWGKEDDSNLLIGIYEYGYGSWEMI 1275
Score = 47 (21.6 bits), Expect = 6.9e-80, Sum P(4) = 6.9e-80
Identities = 12/41 (29%), Positives = 23/41 (56%)
Query: 86 VQQSPM---REQPGIQYKEADENGAEEPGVQSKEADEDDAE 123
VQ+S M ++Q Q+ + +G+EE S+++D+ E
Sbjct: 96 VQRSAMLKKQQQQQQQHPASSNSGSEEDSSSSEDSDDSSNE 136
Score = 41 (19.5 bits), Expect = 2.9e-79, Sum P(4) = 2.9e-79
Identities = 11/40 (27%), Positives = 19/40 (47%)
Query: 98 QYKEADENGAEEPGVQSK-EADEDDAEQHSGFEPQLDAAD 136
Q +D + E G QS+ E+D + P++D A+
Sbjct: 46 QSGSSDSDSGSESGSQSESESDTSRENKVQAKPPKVDGAE 85
Score = 37 (18.1 bits), Expect = 4.7e-79, Sum P(4) = 4.7e-79
Identities = 12/41 (29%), Positives = 18/41 (43%)
Query: 1210 KRAEQEEAVD-NQEFTEEAVGRPEDDELVIEDTVRTDEPTD 1249
KR E ++ D N + + P D E + E+T D D
Sbjct: 1504 KRQESQQNNDQNSNLNAQVIRNP-DVERLKENTNHDDSSRD 1543
>UNIPROTKB|B6ZLK2 [details] [associations]
symbol:CHD1 "Chromodomain-helicase-DNA-binding protein 1"
species:9031 "Gallus gallus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0000775
"chromosome, centromeric region" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013
PROSITE:PS51194 SMART:SM00298 SMART:SM00490 Pfam:PF00385
GO:GO:0005524 GO:GO:0005634 GO:GO:0000775 GO:GO:0006355
GO:GO:0003677 GO:GO:0006351 GO:GO:0004386 InterPro:IPR016197
SUPFAM:SSF54160 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR023780 InterPro:IPR023779
PROSITE:PS00598 EMBL:AB465210 IPI:IPI00573130 UniGene:Gga.4301
UniGene:Gga.8463 STRING:B6ZLK2 HOVERGEN:HBG005325
InterPro:IPR025260 Pfam:PF13907 Uniprot:B6ZLK2
Length = 1719
Score = 534 (193.0 bits), Expect = 2.7e-80, Sum P(6) = 2.7e-80
Identities = 112/292 (38%), Positives = 170/292 (58%)
Query: 455 LREYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTIAMLAHLACEKGIWGPHLIVVPTS 514
LR+YQ GL+WL + K + ILADEMGLGKTI TI+ L +L E ++GP L+VVP S
Sbjct: 477 LRDYQLNGLNWLAHSWCKGNSCILADEMGLGKTIQTISFLNYLFHEHQLYGPFLLVVPLS 536
Query: 515 VMLNWETEFLKWCPAFKILTYFGSAKERKFKR-QGWLKPNS----FHVCITTYRLIIQDS 569
+ +W+ E W P + Y G R R W+ P + F++ +TTY ++++D
Sbjct: 537 TLTSWQREIQTWAPQMNAVVYLGDITSRNMIRTHEWMHPQTKRLKFNILLTTYEILLKDK 596
Query: 570 KVFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPLQNDLMELWSLMHFL 629
W ++ +DEAH +KN S ++TL++F S R+L+TGTPLQN L ELWSL+HF+
Sbjct: 597 SFLGGLNWAFIGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSLLHFI 656
Query: 630 MPHIFQSHQEFKDWFCNPISGMVEGQEKVNKEVVDRLHNVLRPFILRRLKRDVEKQLPMK 689
MP F S ++F++ G G ++KE L PF+LRR+K+DVEK LP K
Sbjct: 657 MPEKFSSWEDFEE---EHGKGREYGYASLHKE--------LEPFLLRRVKKDVEKSLPAK 705
Query: 690 QEHVIYCRLSKRQRNLYEDFIASSETQATLAS-ANFFGMISVIMQLRKVCNH 740
E ++ +S Q+ Y+ + + + S + G ++++M+L+K CNH
Sbjct: 706 VEQILRMEMSALQKQYYKWILTRNYKALSKGSKGSTSGFLNIMMELKKCCNH 757
Score = 391 (142.7 bits), Expect = 2.7e-80, Sum P(6) = 2.7e-80
Identities = 78/151 (51%), Positives = 108/151 (71%)
Query: 996 GKLQELAILLRKLKSDGHRALIFTQMTKMLDILEEFISLYGYTYMRLDGSTQPEERQTLM 1055
GKL L LL +L+ G+R LIF+QM +MLDIL E++ + + RLDGS + E R+ +
Sbjct: 784 GKLILLDKLLIRLRERGNRVLIFSQMVRMLDILAEYLKYRQFPFQRLDGSIKGELRKQAL 843
Query: 1056 QRFNTN-PKIFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQDRCHRIGQTREV 1114
FN + F F+LSTR+GG+GINL ADTV+ +DSDWNP D QAQ R HRIGQ ++V
Sbjct: 844 DHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQV 903
Query: 1115 HIYRLISESTIEENILKKANQKRALDDLVIQ 1145
+IYRL+++ ++EE+IL++A +K LD LVIQ
Sbjct: 904 NIYRLVTKGSVEEDILERAKKKMVLDHLVIQ 934
Score = 56 (24.8 bits), Expect = 2.7e-80, Sum P(6) = 2.7e-80
Identities = 24/100 (24%), Positives = 41/100 (41%)
Query: 191 AVDKVGRESSAEMGEDEAEPTVVEEGHVQGNGNDLLAGSKLDTSGSLVRRCDEINGGLSI 250
+ D E+ + +DE + + G V G G+D S+ + G C+E
Sbjct: 128 SADDSSSETKKKKHKDE-DWQMSGSGSVSGTGSD----SESEEDGDK-SSCEESESDYEP 181
Query: 251 SENHLLDIETSQVRDTSKKSGASTQKQALYDFSDEQEDGD 290
S+++ S K +K+ L D S+E+ED D
Sbjct: 182 KNKVKSRKPPSRIKPKSGKKSTGQKKRQL-DSSEEEEDDD 220
Score = 48 (22.0 bits), Expect = 1.5e-79, Sum P(5) = 1.5e-79
Identities = 19/66 (28%), Positives = 30/66 (45%)
Query: 197 RESSAEMGEDEAEPTVVEEGHVQGNGNDLLAGSKLDTSGSLVRRCDEINGGLSISENHLL 256
R SS E D+ + G G+G+ +GS D S S D +G S S++
Sbjct: 11 RNSSGESRSDD------DSGSASGSGSGSSSGSSSDGSSSQSGSSDSESGSESGSQSES- 63
Query: 257 DIETSQ 262
+ +TS+
Sbjct: 64 ESDTSR 69
Score = 47 (21.6 bits), Expect = 2.7e-80, Sum P(6) = 2.7e-80
Identities = 12/54 (22%), Positives = 27/54 (50%)
Query: 1564 PVKRVLMIKPEKLKKGNVWSRDCVPSPDV-WLPQEDAILCAVVHEYG-PNWSLV 1615
P+ + + PE+ K+ + D+ W ++D+ L ++EYG +W ++
Sbjct: 1219 PLHKSIPSDPEERKRYVIPCHTKAAHFDIDWGKEDDSNLLVGIYEYGYGSWEMI 1272
Score = 46 (21.3 bits), Expect = 2.3e-79, Sum P(5) = 2.3e-79
Identities = 18/57 (31%), Positives = 25/57 (43%)
Query: 69 ERYSSMLAENLVDSHKPVQQSPMREQPGIQYKEADENGAEEPGVQSKEADEDDAEQH 125
E S +N V S KP P R +P K G ++ + S E +EDD E +
Sbjct: 174 ESESDYEPKNKVKSRKP----PSRIKPKSGKKST---GQKKRQLDSSEEEEDDDEDY 223
Score = 45 (20.9 bits), Expect = 2.7e-80, Sum P(6) = 2.7e-80
Identities = 11/40 (27%), Positives = 24/40 (60%)
Query: 86 VQQSPMREQPGIQYKEAD-ENGAEEPGVQSKEADEDDAEQ 124
VQ+S + ++ Q K A ++G+EE S+++ +D + +
Sbjct: 96 VQRSAVLKKQQQQQKAASSDSGSEEDSSSSEDSADDSSSE 135
Score = 38 (18.4 bits), Expect = 2.7e-80, Sum P(6) = 2.7e-80
Identities = 20/87 (22%), Positives = 44/87 (50%)
Query: 1888 KLSLSDSVKCPKSKLRKTSMEHSEIQH-----SSPEPVSNQSVATKDANLRFDLIQEAWL 1942
+L+ + + K K++ +K M+ S+I+ SSP+P S +S +D + + + E
Sbjct: 1320 RLAGAGNSKRRKTRNKKNKMKASKIKEEIKSDSSPQP-SEKS--DEDDDEEDNKVNEIKS 1376
Query: 1943 EDMDGGR-LSCMDQDLSLETVLSSEIP 1968
E+ + + + +D + + T S +P
Sbjct: 1377 ENKEKSKKIPLLDTPVHI-TATSEPVP 1402
Score = 38 (18.4 bits), Expect = 3.5e-80, Sum P(5) = 3.5e-80
Identities = 10/41 (24%), Positives = 19/41 (46%)
Query: 1309 NQLRPIDRYAIRFLELWDPIIDKTAVESEVKFEEREWELDR 1349
N+++ ++ + + L D + TA V E ELD+
Sbjct: 1372 NEIKSENKEKSKKIPLLDTPVHITATSEPVPISEESEELDQ 1412
Score = 38 (18.4 bits), Expect = 3.5e-80, Sum P(5) = 3.5e-80
Identities = 12/50 (24%), Positives = 20/50 (40%)
Query: 1444 ESKAVKEEPSVEPMSIDDDFYDEDATFSDAMSPPSTSQKKRKKAELALYD 1493
++ +KEE + + DED D S+ K K ++ L D
Sbjct: 1340 KASKIKEEIKSDSSPQPSEKSDEDDDEEDNKVNEIKSENKEKSKKIPLLD 1389
>MGI|MGI:88393 [details] [associations]
symbol:Chd1 "chromodomain helicase DNA binding protein 1"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=NAS] [GO:0004386 "helicase activity"
evidence=NAS] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=NAS] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0006333 "chromatin assembly or disassembly" evidence=NAS]
[GO:0006338 "chromatin remodeling" evidence=IGI] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0035064 "methylated histone
residue binding" evidence=ISO] InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298
SMART:SM00490 MGI:MGI:88393 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0006355 GO:GO:0003677
GO:GO:0006351 GO:GO:0003682 GO:GO:0006338 GO:GO:0006333
GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
InterPro:IPR023779 PROSITE:PS00598 HOVERGEN:HBG005325
InterPro:IPR025260 Pfam:PF13907 CTD:1105
GeneTree:ENSGT00560000076896 KO:K11367 HOGENOM:HOG000207917
OMA:AETHENE OrthoDB:EOG4PG601 EMBL:L10410 EMBL:CH466630
EMBL:BC115822 IPI:IPI00107999 PIR:A47392 RefSeq:NP_031716.2
UniGene:Mm.8137 ProteinModelPortal:P40201 SMR:P40201 IntAct:P40201
STRING:P40201 PhosphoSite:P40201 PaxDb:P40201 PRIDE:P40201
Ensembl:ENSMUST00000024627 GeneID:12648 KEGG:mmu:12648
InParanoid:Q14BJ0 NextBio:281852 Bgee:P40201 CleanEx:MM_CHD1
Genevestigator:P40201 GermOnline:ENSMUSG00000023852 Uniprot:P40201
Length = 1711
Score = 526 (190.2 bits), Expect = 2.9e-80, Sum P(5) = 2.9e-80
Identities = 111/292 (38%), Positives = 169/292 (57%)
Query: 455 LREYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTIAMLAHLACEKGIWGPHLIVVPTS 514
LR+YQ GL+WL + K + ILADEMGLGKTI TI+ L +L E ++GP L+VVP S
Sbjct: 479 LRDYQLNGLNWLAHSWCKGNSCILADEMGLGKTIQTISFLNYLFHEHQLYGPFLLVVPLS 538
Query: 515 VMLNWETEFLKWCPAFKILTYFGSAKERKFKR-QGWLKPNS----FHVCITTYRLIIQDS 569
+ +W+ E W + Y G R R W+ P + F++ +TTY ++++D
Sbjct: 539 TLTSWQREIQTWASQMNAVVYLGDINSRNMIRTHEWMHPQTKRLKFNILLTTYEILLKDK 598
Query: 570 KVFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPLQNDLMELWSLMHFL 629
W ++ +DEAH +KN S ++TL++F S R+L+TGTPLQN L ELWSL+HF+
Sbjct: 599 AFLGGLNWAFIGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSLLHFI 658
Query: 630 MPHIFQSHQEFKDWFCNPISGMVEGQEKVNKEVVDRLHNVLRPFILRRLKRDVEKQLPMK 689
MP F S ++F++ G G ++KE L PF+LRR+K+DVEK LP K
Sbjct: 659 MPEKFSSWEDFEE---EHGKGREYGYASLHKE--------LEPFLLRRVKKDVEKSLPAK 707
Query: 690 QEHVIYCRLSKRQRNLYEDFIASSETQATLAS-ANFFGMISVIMQLRKVCNH 740
E ++ +S Q+ Y+ + + + S + G ++++M+L+K CNH
Sbjct: 708 VEQILRMEMSALQKQYYKWILTRNYKALSKGSKGSTSGFLNIMMELKKCCNH 759
Score = 391 (142.7 bits), Expect = 2.9e-80, Sum P(5) = 2.9e-80
Identities = 78/151 (51%), Positives = 108/151 (71%)
Query: 996 GKLQELAILLRKLKSDGHRALIFTQMTKMLDILEEFISLYGYTYMRLDGSTQPEERQTLM 1055
GKL L LL +L+ G+R LIF+QM +MLDIL E++ + + RLDGS + E R+ +
Sbjct: 786 GKLILLDKLLIRLRERGNRVLIFSQMVRMLDILAEYLKYRQFPFQRLDGSIKGELRKQAL 845
Query: 1056 QRFNTN-PKIFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQDRCHRIGQTREV 1114
FN + F F+LSTR+GG+GINL ADTV+ +DSDWNP D QAQ R HRIGQ ++V
Sbjct: 846 DHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQV 905
Query: 1115 HIYRLISESTIEENILKKANQKRALDDLVIQ 1145
+IYRL+++ ++EE+IL++A +K LD LVIQ
Sbjct: 906 NIYRLVTKGSVEEDILERAKKKMVLDHLVIQ 936
Score = 52 (23.4 bits), Expect = 2.9e-80, Sum P(5) = 2.9e-80
Identities = 19/72 (26%), Positives = 31/72 (43%)
Query: 198 ESSAEMGEDEAEPTVVEEGHVQGNGNDLLAGSKLDTSGSLVRRCDEINGGLSISENHLLD 257
E S G E+ + + G G+G+ +GS D S S D +G S S++ +
Sbjct: 7 EESVRNGSGESSQSGDDCGSASGSGSGSSSGSSSDGSSSQSGSSDSDSGSDSGSQSES-E 65
Query: 258 IETSQVRDTSKK 269
+TS+ K
Sbjct: 66 SDTSRENKVQAK 77
Score = 50 (22.7 bits), Expect = 4.7e-80, Sum P(5) = 4.7e-80
Identities = 15/41 (36%), Positives = 24/41 (58%)
Query: 86 VQQSPM-REQP--GIQYKEADEN-GAEEPGVQSKEADEDDA 122
VQ+S M R+QP Q + A N G+EE S+++D+ +
Sbjct: 96 VQRSAMLRKQPQQAQQQRPASSNSGSEEDSSSSEDSDDSSS 136
Score = 50 (22.7 bits), Expect = 5.6e-45, Sum P(3) = 5.6e-45
Identities = 21/93 (22%), Positives = 34/93 (36%)
Query: 1095 PAMDQQAQDRCHRIGQTREVHIYRLISESTIEENILKKANQKRALDDLVIQ----SGGYN 1150
P+++ +DRCH ++ H S+ E K + R L D + S G
Sbjct: 1618 PSLEGGLKDRCHSDHRSHSDHRMHSDHRSSSEHTHHKSSRDYRYLSDWQLDHRAASSGPR 1677
Query: 1151 TEF-----FKKLDPMELFSGHRTLPMKTMQKEK 1178
+ + P E + HR+ P T K
Sbjct: 1678 SPLDQRSPYGSRSPFEHSAEHRSTPEHTWSSRK 1710
Score = 49 (22.3 bits), Expect = 2.9e-80, Sum P(5) = 2.9e-80
Identities = 12/55 (21%), Positives = 28/55 (50%)
Query: 1563 MPVKRVLMIKPEKLKKGNVWSRDCVPSPDV-WLPQEDAILCAVVHEYG-PNWSLV 1615
+P+ + + PE+ K+ + D+ W ++D+ L ++EYG +W ++
Sbjct: 1220 IPLHKSIPSDPEERKQYTIPCHTKAAHFDIDWGKEDDSNLLIGIYEYGYGSWEMI 1274
Score = 47 (21.6 bits), Expect = 2.9e-80, Sum P(5) = 2.9e-80
Identities = 15/62 (24%), Positives = 30/62 (48%)
Query: 1819 SVYGSDLETSVNKSTRENHHLKDSQVAENRFRDAARACIEDSLGWASSAFPANDAKLRSV 1878
S + S E + +KS+R+ +L D Q+ R+ ++ + S + + A+ RS
Sbjct: 1642 SDHRSSSEHTHHKSSRDYRYLSDWQLDHRAASSGPRSPLDQRSPYGSRSPFEHSAEHRST 1701
Query: 1879 PK 1880
P+
Sbjct: 1702 PE 1703
Score = 45 (20.9 bits), Expect = 1.5e-79, Sum P(5) = 1.5e-79
Identities = 28/121 (23%), Positives = 51/121 (42%)
Query: 182 PLQELLKRYAVDKVGRESSAEMGEDEAEPTVV--------EEGHVQGNGNDLLAGSKLDT 233
P Q +R A G E + ED + + E+ + G+G+ +GS D+
Sbjct: 106 PQQAQQQRPASSNSGSEEDSSSSEDSDDSSSGAKRKKHNDEDWQMSGSGSPSQSGS--DS 163
Query: 234 SGSLVRRCDEINGGLSISENHLLDIETSQVRDTSK-KSGAST--QKQALYDFSDEQEDGD 290
R +G S E + + + ++ SK K+G QK+ D S++++D D
Sbjct: 164 ESEEERDKSSCDGTESDYEPKN-KVRSRKPQNRSKSKNGKKILGQKKRQIDSSEDEDDED 222
Query: 291 F 291
+
Sbjct: 223 Y 223
Score = 37 (18.1 bits), Expect = 1.0e-78, Sum P(5) = 1.0e-78
Identities = 8/21 (38%), Positives = 12/21 (57%)
Query: 117 ADEDDAEQHSGFEPQLDAADI 137
A E D + ++GFE + DI
Sbjct: 294 AVEADGDPNAGFERNKEPGDI 314
>CGD|CAL0001390 [details] [associations]
symbol:orf19.3035 species:5476 "Candida albicans" [GO:0000124
"SAGA complex" evidence=IEA] [GO:0031934 "mating-type region
heterochromatin" evidence=IEA] [GO:0046695 "SLIK (SAGA-like)
complex" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0030874 "nucleolar chromatin" evidence=IEA] [GO:2000616
"negative regulation of histone H3-K9 acetylation" evidence=IEA]
[GO:0034401 "regulation of transcription by chromatin organization"
evidence=IEA] [GO:0071441 "negative regulation of histone H3-K14
acetylation" evidence=IEA] [GO:0006369 "termination of RNA
polymerase II transcription" evidence=IEA] [GO:0016584 "nucleosome
positioning" evidence=IEA] [GO:0006368 "transcription elongation
from RNA polymerase II promoter" evidence=IEA] [GO:0000070 "mitotic
sister chromatid segregation" evidence=IEA] [GO:0060303 "regulation
of nucleosome density" evidence=IEA] [GO:0006200 "ATP catabolic
process" evidence=IEA] [GO:0043044 "ATP-dependent chromatin
remodeling" evidence=IEA] [GO:2000104 "negative regulation of
DNA-dependent DNA replication" evidence=IEA] [GO:0042766
"nucleosome mobilization" evidence=IEA] [GO:0001178 "regulation of
transcriptional start site selection at RNA polymerase II promoter"
evidence=IEA] [GO:0006363 "termination of RNA polymerase I
transcription" evidence=IEA] [GO:0030466 "chromatin silencing at
silent mating-type cassette" evidence=IEA] [GO:0000182 "rDNA
binding" evidence=IEA] [GO:0031490 "chromatin DNA binding"
evidence=IEA] [GO:0035064 "methylated histone residue binding"
evidence=IEA] [GO:0004003 "ATP-dependent DNA helicase activity"
evidence=IEA] InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013
PROSITE:PS51194 SMART:SM00298 SMART:SM00490 CGD:CAL0001390
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 EMBL:AACQ01000017
EMBL:AACQ01000015 GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197
SUPFAM:SSF54160 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR023780 InterPro:IPR023779
PROSITE:PS00598 InterPro:IPR025260 Pfam:PF13907 KO:K11367
RefSeq:XP_721262.1 RefSeq:XP_721533.1 ProteinModelPortal:Q5AI17
STRING:Q5AI17 GeneID:3636889 GeneID:3637077 KEGG:cal:CaO19.10553
KEGG:cal:CaO19.3035 Uniprot:Q5AI17
Length = 1410
Score = 521 (188.5 bits), Expect = 2.9e-80, Sum P(4) = 2.9e-80
Identities = 122/306 (39%), Positives = 176/306 (57%)
Query: 449 FLLKFPLREYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTIAMLAHLACEKGIWGPHL 508
F+ LR++Q GL+W+ ++ + NGILADEMGLGKT+ T+A L+ L + GPHL
Sbjct: 356 FIKNGELRDFQLTGLNWMAFLWSRNENGILADEMGLGKTVQTVAFLSWLIYARRQNGPHL 415
Query: 509 IVVPTSVMLNWETEFLKWCPAFKILTYFGSAKERKFKRQGWL-----KPNSFHVCITTYR 563
+VVP S + W+ F KW P + Y G+ + RK R+ L KP F+V +TTY
Sbjct: 416 VVVPLSTVPAWQETFEKWAPDVNCVYYLGNGEARKTIREYELYNQNRKPK-FNVLLTTYE 474
Query: 564 LIIQDSKVFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPLQNDLMELW 623
I++D KW++L +DEAH +KN +S ++ L F R+L+TGTPLQN++ EL
Sbjct: 475 YILKDKNELGAFKWQFLAVDEAHRLKNAESSLYEALKGFKVSNRLLITGTPLQNNVKELA 534
Query: 624 SLMHFLMPHIFQSHQEFKDWFCNPISGMVEGQEKVNKEVVDRLHNVLRPFILRRLKRDVE 683
+L +FLMP F QE D+ E + ++ + L + PFILRRLK+DVE
Sbjct: 535 ALCNFLMPGKFTIDQEI-DF---------ETIDSEQEQYIKDLQKKISPFILRRLKKDVE 584
Query: 684 KQLPMKQEHVIYCRLSKRQRNLYEDFIASSETQATLASANFFGMISV--IM-QLRKVCNH 740
K LP K E ++ LS Q Y++ I ++ A L + N IS+ IM +L+K NH
Sbjct: 585 KSLPSKSERILRVELSDIQTEYYKNII--TKNYAALNAGNRGSQISLLNIMSELKKASNH 642
Query: 741 PDLFEG 746
P LF+G
Sbjct: 643 PYLFDG 648
Score = 406 (148.0 bits), Expect = 2.9e-80, Sum P(4) = 2.9e-80
Identities = 102/264 (38%), Positives = 144/264 (54%)
Query: 991 IQFDCGKLQELAILLRKLKSDGHRALIFTQMTKMLDILEEFISLYGYTYMRLDGSTQPEE 1050
I GK+ L LL +L+ +GHR LIF+QM +MLDIL +++ + GY + RLDG+ +
Sbjct: 669 IVMSSGKMVLLEQLLSRLRKEGHRVLIFSQMVRMLDILGDYMFIKGYQFQRLDGTVPSSK 728
Query: 1051 RQTLMQRFNT-NPKIFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQDRCHRIG 1109
R+ + FN K F F+LSTR+GG+GINL+ ADTVI +DSDWNP D QA R HRIG
Sbjct: 729 RKIAIDHFNAPGSKDFAFLLSTRAGGLGINLMTADTVIIFDSDWNPQADLQAMARAHRIG 788
Query: 1110 QTREVHIYRLISESTIEENILKKANQKRALDDLVIQSG--GYNTEFFKKLDPM--ELFSG 1165
Q V +YR +S+ T+EE IL++A +K L+ +I G + + K +P EL S
Sbjct: 789 QKNHVSVYRFVSKDTVEEQILERARKKMVLEYAIISLGITDPSAKNGSKTEPSTNEL-SQ 847
Query: 1166 HRTLPMKTMQKEKAINNGNEVSLSNADVEAALKCVEDEADYMALKRAE--QEEAVDNQEF 1223
TM KE N N+ L N +++ L ED L + EE + E
Sbjct: 848 ILKFGAGTMFKE----NNNQQKLENLNLDDVLSHAEDHVTTPELGESNLGSEEFLKQFEV 903
Query: 1224 TEEAVGRPEDDELVIEDTVRT-DE 1246
T+ DD + E+ + DE
Sbjct: 904 TDYKADVEWDDIIPQEELTKLKDE 927
Score = 46 (21.3 bits), Expect = 8.0e-43, Sum P(4) = 8.0e-43
Identities = 17/66 (25%), Positives = 29/66 (43%)
Query: 1176 KEKAINNGNEVSLSNAD---VEAALKCVEDEADYMALKRAEQEEAVDNQEFTEEAVGRPE 1232
+E +I N N V + +A + + + V++E A+ AE E + Q+ G P
Sbjct: 1011 EEGSITNKNPVLVKHAYNEIISTSKQLVKEEEARRAVVLAELERKAEEQKRRPPVPGEPN 1070
Query: 1233 DDELVI 1238
L I
Sbjct: 1071 QTALWI 1076
Score = 44 (20.5 bits), Expect = 2.9e-80, Sum P(4) = 2.9e-80
Identities = 8/26 (30%), Positives = 16/26 (61%)
Query: 1593 WLPQEDAILCAVVHEYG-PNWSLVSD 1617
W ++DA+L V+++G +W + D
Sbjct: 1138 WTAKDDAMLLVGVYKFGYGSWVQIRD 1163
Score = 41 (19.5 bits), Expect = 6.0e-80, Sum P(4) = 6.0e-80
Identities = 16/63 (25%), Positives = 25/63 (39%)
Query: 1518 DSDSKLSRKRHDGSTELKTCESIFIDLEQKSASRSKMGGKISITAMPVKRVLMIKPEKLK 1577
+ D K S K+ GS L L + S S +GG + ++ KR+ P
Sbjct: 1187 NQDGKESVKKVPGSVHLGRRVDYLFTLLRDEESDSSVGGSTPVGSVR-KRIRKSTPVPHN 1245
Query: 1578 KGN 1580
G+
Sbjct: 1246 SGS 1248
Score = 40 (19.1 bits), Expect = 2.9e-80, Sum P(4) = 2.9e-80
Identities = 18/87 (20%), Positives = 31/87 (35%)
Query: 262 QVRDTSKKSGASTQKQALYDFSDEQEDGDFVVATGXXXXXXXXXXXXXXXXXXDSNNYID 321
+V+D + G S + +F D+ +D D + G N
Sbjct: 48 KVQD-DYEDGISMDEDENDEFGDDDDDDDDIYYDGSFGAGKKMKSKPKTSKKQKGKN--- 103
Query: 322 EIALLQKESEIPVEELLARYRKDMKIN 348
A K+S P +EL R + ++N
Sbjct: 104 TKARKTKQSPSPPQELRFSSRNNKQVN 130
Score = 37 (18.1 bits), Expect = 6.0e-80, Sum P(4) = 6.0e-80
Identities = 5/11 (45%), Positives = 9/11 (81%)
Query: 281 DFSDEQEDGDF 291
+F +E E+GD+
Sbjct: 148 EFDEEDEEGDY 158
Score = 37 (18.1 bits), Expect = 2.5e-30, Sum P(3) = 2.5e-30
Identities = 16/56 (28%), Positives = 25/56 (44%)
Query: 661 EVVDRLHNVLRPFILRRLKRDVEKQLPMKQEHVIYCRLSKRQRNLYEDFIASSETQ 716
E+ L+ + R RR VE +E V R K+ ++ YED I+ E +
Sbjct: 11 ELNPELYGLRRSHRERRGPAIVESD---SEEDVAPSRKKKKVQDDYEDGISMDEDE 63
>UNIPROTKB|F1MGF2 [details] [associations]
symbol:CHD1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0035064 "methylated histone residue binding"
evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0003677
GO:GO:0006338 GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
InterPro:IPR023779 PROSITE:PS00598 InterPro:IPR025260 Pfam:PF13907
GeneTree:ENSGT00560000076896 OMA:AETHENE EMBL:DAAA02021391
EMBL:DAAA02021392 IPI:IPI00717393 UniGene:Bt.105262
Ensembl:ENSBTAT00000034967 NextBio:20866990 Uniprot:F1MGF2
Length = 1810
Score = 526 (190.2 bits), Expect = 6.2e-80, Sum P(4) = 6.2e-80
Identities = 111/292 (38%), Positives = 169/292 (57%)
Query: 455 LREYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTIAMLAHLACEKGIWGPHLIVVPTS 514
LR+YQ GL+WL + K + ILADEMGLGKTI TI+ L +L E ++GP L+VVP S
Sbjct: 493 LRDYQLNGLNWLAHSWCKGNSCILADEMGLGKTIQTISFLNYLFHEHQLYGPFLLVVPLS 552
Query: 515 VMLNWETEFLKWCPAFKILTYFGSAKERKFKR-QGWLKPNS----FHVCITTYRLIIQDS 569
+ +W+ E W + Y G R R W+ P + F++ +TTY ++++D
Sbjct: 553 TLTSWQREIQTWASQMNAVVYLGDINSRNMIRTHEWMHPQTKRLKFNILLTTYEILLKDK 612
Query: 570 KVFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPLQNDLMELWSLMHFL 629
W ++ +DEAH +KN S ++TL++F S R+L+TGTPLQN L ELWSL+HF+
Sbjct: 613 AFLGGLNWAFIGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSLLHFI 672
Query: 630 MPHIFQSHQEFKDWFCNPISGMVEGQEKVNKEVVDRLHNVLRPFILRRLKRDVEKQLPMK 689
MP F S ++F++ G G ++KE L PF+LRR+K+DVEK LP K
Sbjct: 673 MPEKFSSWEDFEE---EHGKGREYGYASLHKE--------LEPFLLRRVKKDVEKSLPAK 721
Query: 690 QEHVIYCRLSKRQRNLYEDFIASSETQATLAS-ANFFGMISVIMQLRKVCNH 740
E ++ +S Q+ Y+ + + + S + G ++++M+L+K CNH
Sbjct: 722 VEQILRMEMSALQKQYYKWILTRNYKALSKGSKGSTSGFLNIMMELKKCCNH 773
Score = 391 (142.7 bits), Expect = 6.2e-80, Sum P(4) = 6.2e-80
Identities = 78/151 (51%), Positives = 108/151 (71%)
Query: 996 GKLQELAILLRKLKSDGHRALIFTQMTKMLDILEEFISLYGYTYMRLDGSTQPEERQTLM 1055
GKL L LL +L+ G+R LIF+QM +MLDIL E++ + + RLDGS + E R+ +
Sbjct: 800 GKLILLDKLLIRLRERGNRVLIFSQMVRMLDILAEYLKYRQFPFQRLDGSIKGELRKQAL 859
Query: 1056 QRFNTN-PKIFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQDRCHRIGQTREV 1114
FN + F F+LSTR+GG+GINL ADTV+ +DSDWNP D QAQ R HRIGQ ++V
Sbjct: 860 DHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQV 919
Query: 1115 HIYRLISESTIEENILKKANQKRALDDLVIQ 1145
+IYRL+++ ++EE+IL++A +K LD LVIQ
Sbjct: 920 NIYRLVTKGSVEEDILERAKKKMVLDHLVIQ 950
Score = 52 (23.4 bits), Expect = 6.2e-80, Sum P(4) = 6.2e-80
Identities = 14/41 (34%), Positives = 24/41 (58%)
Query: 86 VQQSPM--REQPGIQYKEADEN-GAEEPGVQSKEADEDDAE 123
VQ+S M ++Q Q +A N G+EE S+++D+ +E
Sbjct: 96 VQRSAMLKKQQQQQQQHQASSNSGSEEDSSSSEDSDDSSSE 136
Score = 51 (23.0 bits), Expect = 7.9e-80, Sum P(4) = 7.9e-80
Identities = 18/68 (26%), Positives = 29/68 (42%)
Query: 198 ESSAEMGEDEAEPTVVEEGHVQGNGNDLLAGSKLDTSGSLVRRCDEINGGLSISENHLLD 257
E S E+ + + G G+G+ +GS D S S D +G S S++ +
Sbjct: 7 EESVRNSSGESSQSDDDSGSASGSGSGSSSGSSSDGSSSQSGSSDSDSGSESGSQS---E 63
Query: 258 IETSQVRD 265
E+ RD
Sbjct: 64 SESDNSRD 71
Score = 46 (21.3 bits), Expect = 6.2e-80, Sum P(4) = 6.2e-80
Identities = 12/55 (21%), Positives = 28/55 (50%)
Query: 1563 MPVKRVLMIKPEKLKKGNVWSRDCVPSPDV-WLPQEDAILCAVVHEYG-PNWSLV 1615
+P+ + + PE+ K+ + D+ W ++D+ L ++EYG +W ++
Sbjct: 1232 IPLHKSIPSDPEERKQYIIPCHTKAAHFDIDWGKEDDSNLLIGIYEYGYGSWEMI 1286
Score = 41 (19.5 bits), Expect = 8.7e-79, Sum P(4) = 8.7e-79
Identities = 11/40 (27%), Positives = 19/40 (47%)
Query: 98 QYKEADENGAEEPGVQSK-EADEDDAEQHSGFEPQLDAAD 136
Q +D + E G QS+ E+D + P++D A+
Sbjct: 46 QSGSSDSDSGSESGSQSESESDNSRDNKVQAKPPKVDGAE 85
Score = 41 (19.5 bits), Expect = 8.7e-79, Sum P(4) = 8.7e-79
Identities = 15/57 (26%), Positives = 25/57 (43%)
Query: 69 ERYSSMLAENLVDSHKPVQQSPMREQPGIQYKEADENGAEEPGVQSKEADEDDAEQH 125
E S +N V S KP +S + I G ++ + S E ++DD E++
Sbjct: 175 ETESDYEPKNKVKSRKPQNRSKSKNGKKII-------GQKKRQIDSSEEEDDDEEEY 224
Score = 37 (18.1 bits), Expect = 5.4e-79, Sum P(4) = 5.4e-79
Identities = 12/40 (30%), Positives = 16/40 (40%)
Query: 1210 KRAEQEEAVDNQEFTEEAVGRPEDDELVIEDTVRTDEPTD 1249
KR E ++ D V R D E + E+T D D
Sbjct: 1603 KRQESQQNNDQNSSLNTQVIRNPDVERLKENTNHDDSSRD 1642
>UNIPROTKB|J9P6Y8 [details] [associations]
symbol:CHD1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
InterPro:IPR025260 Pfam:PF13907 GeneTree:ENSGT00560000076896
OMA:AETHENE EMBL:AAEX03002026 Ensembl:ENSCAFT00000043995
Uniprot:J9P6Y8
Length = 1782
Score = 526 (190.2 bits), Expect = 9.1e-80, Sum P(4) = 9.1e-80
Identities = 111/292 (38%), Positives = 169/292 (57%)
Query: 455 LREYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTIAMLAHLACEKGIWGPHLIVVPTS 514
LR+YQ GL+WL + K + ILADEMGLGKTI TI+ L +L E ++GP L+VVP S
Sbjct: 463 LRDYQLNGLNWLAHSWCKGNSCILADEMGLGKTIQTISFLNYLFHEHQLYGPFLLVVPLS 522
Query: 515 VMLNWETEFLKWCPAFKILTYFGSAKERKFKR-QGWLKPNS----FHVCITTYRLIIQDS 569
+ +W+ E W + Y G R R W+ P + F++ +TTY ++++D
Sbjct: 523 TLTSWQREIQTWASQMNAVVYLGDINSRNMIRTHEWMHPQTKRLKFNILLTTYEILLKDK 582
Query: 570 KVFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPLQNDLMELWSLMHFL 629
W ++ +DEAH +KN S ++TL++F S R+L+TGTPLQN L ELWSL+HF+
Sbjct: 583 AFLGGLNWAFIGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSLLHFI 642
Query: 630 MPHIFQSHQEFKDWFCNPISGMVEGQEKVNKEVVDRLHNVLRPFILRRLKRDVEKQLPMK 689
MP F S ++F++ G G ++KE L PF+LRR+K+DVEK LP K
Sbjct: 643 MPEKFSSWEDFEE---EHGKGREYGYASLHKE--------LEPFLLRRVKKDVEKSLPAK 691
Query: 690 QEHVIYCRLSKRQRNLYEDFIASSETQATLAS-ANFFGMISVIMQLRKVCNH 740
E ++ +S Q+ Y+ + + + S + G ++++M+L+K CNH
Sbjct: 692 VEQILRMEMSALQKQYYKWILTRNYKALSKGSKGSTSGFLNIMMELKKCCNH 743
Score = 391 (142.7 bits), Expect = 9.1e-80, Sum P(4) = 9.1e-80
Identities = 78/151 (51%), Positives = 108/151 (71%)
Query: 996 GKLQELAILLRKLKSDGHRALIFTQMTKMLDILEEFISLYGYTYMRLDGSTQPEERQTLM 1055
GKL L LL +L+ G+R LIF+QM +MLDIL E++ + + RLDGS + E R+ +
Sbjct: 770 GKLILLDKLLIRLRERGNRVLIFSQMVRMLDILAEYLKYRQFPFQRLDGSIKGELRKQAL 829
Query: 1056 QRFNTN-PKIFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQDRCHRIGQTREV 1114
FN + F F+LSTR+GG+GINL ADTV+ +DSDWNP D QAQ R HRIGQ ++V
Sbjct: 830 DHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQV 889
Query: 1115 HIYRLISESTIEENILKKANQKRALDDLVIQ 1145
+IYRL+++ ++EE+IL++A +K LD LVIQ
Sbjct: 890 NIYRLVTKGSVEEDILERAKKKMVLDHLVIQ 920
Score = 49 (22.3 bits), Expect = 9.1e-80, Sum P(4) = 9.1e-80
Identities = 12/55 (21%), Positives = 28/55 (50%)
Query: 1563 MPVKRVLMIKPEKLKKGNVWSRDCVPSPDV-WLPQEDAILCAVVHEYG-PNWSLV 1615
+P+ + + PE+ K+ + D+ W ++D+ L ++EYG +W ++
Sbjct: 1204 IPLHKSIPSDPEERKQYTIPCHTKAAHFDIDWGKEDDSNLLIGIYEYGYGSWEMI 1258
Score = 47 (21.6 bits), Expect = 9.1e-80, Sum P(4) = 9.1e-80
Identities = 12/41 (29%), Positives = 23/41 (56%)
Query: 86 VQQSPM---REQPGIQYKEADENGAEEPGVQSKEADEDDAE 123
VQ+S M ++Q Q+ + +G+EE S+++D+ E
Sbjct: 79 VQRSAMLKKQQQQQQQHPASSNSGSEEDSSSSEDSDDSSNE 119
Score = 45 (20.9 bits), Expect = 1.5e-79, Sum P(4) = 1.5e-79
Identities = 15/56 (26%), Positives = 25/56 (44%)
Query: 214 EEGHVQGNGNDLLAGSKLDTSGSLVRRCDEINGGLSISENHLLDIETSQVRDTSKK 269
+ G G+G+ +GS D S S D +G S S++ + +TS+ K
Sbjct: 6 DSGSASGSGSGSSSGSSSDGSSSQSGSSDSDSGSESGSQSES-ESDTSRENKVQAK 60
Score = 41 (19.5 bits), Expect = 3.8e-79, Sum P(4) = 3.8e-79
Identities = 11/40 (27%), Positives = 19/40 (47%)
Query: 98 QYKEADENGAEEPGVQSK-EADEDDAEQHSGFEPQLDAAD 136
Q +D + E G QS+ E+D + P++D A+
Sbjct: 29 QSGSSDSDSGSESGSQSESESDTSRENKVQAKPPKVDGAE 68
Score = 37 (18.1 bits), Expect = 1.6e-78, Sum P(4) = 1.6e-78
Identities = 12/41 (29%), Positives = 18/41 (43%)
Query: 1210 KRAEQEEAVD-NQEFTEEAVGRPEDDELVIEDTVRTDEPTD 1249
KR E ++ D N + + P D E + E+T D D
Sbjct: 1575 KRQESQQNNDQNSNLNAQVIRNP-DVERLKENTNHDDSSRD 1614
>POMBASE|SPAC3G6.01 [details] [associations]
symbol:hrp3 "ATP-dependent DNA helicase Hrp3"
species:4896 "Schizosaccharomyces pombe" [GO:0000070 "mitotic
sister chromatid segregation" evidence=IMP] [GO:0000790 "nuclear
chromatin" evidence=NAS] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004003 "ATP-dependent DNA helicase activity" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005524 "ATP
binding" evidence=IC] [GO:0005634 "nucleus" evidence=IDA]
[GO:0006338 "chromatin remodeling" evidence=NAS] [GO:0008094
"DNA-dependent ATPase activity" evidence=ISM] [GO:0030466
"chromatin silencing at silent mating-type cassette" evidence=IMP]
[GO:0031934 "mating-type region heterochromatin" evidence=IDA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEP] [GO:0060303 "regulation of
nucleosome density" evidence=IMP] [GO:0030702 "chromatin silencing
at centromere" evidence=IMP] InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS00690
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
PomBase:SPAC3G6.01 Pfam:PF00385 GO:GO:0005524 EMBL:CU329670
GenomeReviews:CU329670_GR GO:GO:0003677 GO:GO:0045944 GO:GO:0006351
GO:GO:0006338 GO:GO:0030466 GO:GO:0000790 GO:GO:0000070
GO:GO:0004003 GO:GO:0031934 InterPro:IPR016197 SUPFAM:SSF54160
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
InterPro:IPR025260 Pfam:PF13907 KO:K11367 HOGENOM:HOG000207917
OrthoDB:EOG4TF3TB GO:GO:0060303 PIR:T38720 RefSeq:NP_594967.1
ProteinModelPortal:O14139 MINT:MINT-4670837 STRING:O14139
EnsemblFungi:SPAC3G6.01.1 GeneID:2543064 KEGG:spo:SPAC3G6.01
OMA:HINGSST NextBio:20804092 Uniprot:O14139
Length = 1388
Score = 510 (184.6 bits), Expect = 2.0e-79, Sum P(4) = 2.0e-79
Identities = 107/300 (35%), Positives = 173/300 (57%)
Query: 455 LREYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTIAMLAHLACEKGIWGPHLIVVPTS 514
LR++Q G++W+ ++ K NGILADEMGLGKT+ T+A L++LA GP L+VVP S
Sbjct: 375 LRDFQLTGVNWMAYLWHKNENGILADEMGLGKTVQTVAFLSYLAHSLRQHGPFLVVVPLS 434
Query: 515 VMLNWETEFLKWCPAFKILTYFGSAKERKFKRQ------GWLKPNSFHVCITTYRLIIQD 568
+ W+ W ++Y G+ R+ R G K F++ +TTY +++D
Sbjct: 435 TVPAWQETLALWASDMNCISYLGNTTSRQVIRDYEFYVDGTQKIK-FNLLLTTYEYVLKD 493
Query: 569 SKVFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPLQNDLMELWSLMHF 628
V KW+Y+ +DEAH +KN +S ++ L F + R+L+TGTPLQN++ EL +L+ F
Sbjct: 494 RSVLSNIKWQYMAIDEAHRLKNSESSLYEALSQFKNSNRLLITGTPLQNNIRELAALVDF 553
Query: 629 LMPHIFQSHQEFKDWFCNPISGMVEGQEKVNKEVVDRLHNVLRPFILRRLKRDVEKQLPM 688
LMP F+ +E +E ++ + + L L+P+ILRRLK+DVEK LP
Sbjct: 554 LMPGKFEIREEIN----------LEAPDEEQEAYIRSLQEHLQPYILRRLKKDVEKSLPS 603
Query: 689 KQEHVIYCRLSKRQRNLYEDFIASSETQAT--LASANFFGMISVIMQLRKVCNHPDLFEG 746
K E ++ LS Q Y++ + + T ++S + +++++++L+K NHP LF+G
Sbjct: 604 KSERILRVELSDLQMYWYKNILTRNYRVLTQSISSGSQISLLNIVVELKKASNHPYLFDG 663
Score = 415 (151.1 bits), Expect = 2.0e-79, Sum P(4) = 2.0e-79
Identities = 99/254 (38%), Positives = 143/254 (56%)
Query: 996 GKLQELAILLRKLKSDGHRALIFTQMTKMLDILEEFISLYGYTYMRLDGSTQPEERQTLM 1055
GK+ L LL +L+ DGHR LIF+QM +MLDIL +++SL GY + RLDG+ R+T +
Sbjct: 690 GKMVLLDKLLSRLRRDGHRVLIFSQMVRMLDILGDYLSLRGYPHQRLDGTVPAAVRRTSI 749
Query: 1056 QRFNT-NPKIFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQDRCHRIGQTREV 1114
FN N F+F+LSTR+GG+GINL+ ADTVI +DSDWNP D QA R HRIGQ V
Sbjct: 750 DHFNAPNSPDFVFLLSTRAGGLGINLMTADTVIIFDSDWNPQADLQAMARAHRIGQKNHV 809
Query: 1115 HIYRLISESTIEENILKKANQKRALDDLVIQSGGYNTEFFKKLDPMELFSGHRTLPMKTM 1174
+YRL+S+ TIEE++L++A +K L+ +I G + + K D L
Sbjct: 810 MVYRLLSKDTIEEDVLERARRKMILEYAIISLGVTDKQKNSKNDKFSAEELSAILKFGAS 869
Query: 1175 QKEKAINNGNEVSLSNADVEAALKCVEDEADYMALKRAEQ--EEAVDNQEFTEEAVGRPE 1232
KA NN + L + +++ L+ ED + A EE + E T+
Sbjct: 870 NMFKAENN--QKKLEDMNLDEILEHAEDHDTSNDVGGASMGGEEFLKQFEVTDYKADVSW 927
Query: 1233 DDELVIEDTVRTDE 1246
DD + + + + +E
Sbjct: 928 DDIIPLTEREKFEE 941
Score = 41 (19.5 bits), Expect = 2.0e-79, Sum P(4) = 2.0e-79
Identities = 14/48 (29%), Positives = 25/48 (52%)
Query: 1648 RYILSVPDNSI-NEKTSNVGSGKALLKVTEDNVRTLLNVAAEQEDNEL 1694
R +S + + N++++N S KALL +T V+ + Q N+L
Sbjct: 1046 RKAVSAAEKDLSNDQSNNKSSRKALL-ITFKGVKNINAETLVQRLNDL 1092
Score = 40 (19.1 bits), Expect = 2.6e-79, Sum P(4) = 2.6e-79
Identities = 9/27 (33%), Positives = 16/27 (59%)
Query: 1593 WLPQEDAILCAVV--HEYGPNWSLVSD 1617
W P+ED++L + + H +G W + D
Sbjct: 1123 WGPREDSMLLSGICKHGFGA-WLEIRD 1148
Score = 38 (18.4 bits), Expect = 4.1e-79, Sum P(4) = 4.1e-79
Identities = 8/19 (42%), Positives = 13/19 (68%)
Query: 1234 DELVIEDTVRTDE--PTDQ 1250
D++ +EDT +TD P D+
Sbjct: 1156 DKIFLEDTKQTDNSVPKDK 1174
Score = 38 (18.4 bits), Expect = 6.2e-41, Sum P(3) = 6.2e-41
Identities = 10/33 (30%), Positives = 16/33 (48%)
Query: 948 KSGASVFLQPTYKEKCSEVLSPLLFPIRPAIVR 980
K +V L K +C E L++P+R + R
Sbjct: 1287 KDDGNVSLNAEQKARCKE----LMYPVRKHMKR 1315
Score = 38 (18.4 bits), Expect = 4.1e-31, Sum P(3) = 4.1e-31
Identities = 7/19 (36%), Positives = 10/19 (52%)
Query: 537 GSAKERKFKRQGWLKPNSF 555
G A +RK + WL P +
Sbjct: 41 GVASKRKLQSTEWLDPELY 59
Score = 37 (18.1 bits), Expect = 2.0e-79, Sum P(4) = 2.0e-79
Identities = 9/43 (20%), Positives = 20/43 (46%)
Query: 245 NGGLSISENHLLDIETSQVRDTSKKSGASTQKQALYDFSDEQE 287
N G + + D+ S+ R ++ + ++ + + D DE E
Sbjct: 70 NPGRYVDTDDQEDVFPSKHRKGTRNGSSFSRHRTIRDLDDEAE 112
Score = 37 (18.1 bits), Expect = 7.9e-41, Sum P(3) = 7.9e-41
Identities = 6/17 (35%), Positives = 13/17 (76%)
Query: 1934 FDLIQEAWLEDMDG-GR 1949
FD ++E+W++ ++ GR
Sbjct: 661 FDGVEESWMQKINSQGR 677
>UNIPROTKB|A7E2D7 [details] [associations]
symbol:EP400 "E1A-binding protein p400" species:9606 "Homo
sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR000330 Pfam:PF00176
GO:GO:0005524 GO:GO:0003677 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR013999 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 SMART:SM00573 PROSITE:PS51204
EMBL:AC137590 EMBL:AC137632 IPI:IPI00798339 UniGene:Hs.595201
HGNC:HGNC:11958 HOVERGEN:HBG051488 ChiTaRS:EP400 EMBL:AC131009
EMBL:BC150291 STRING:A7E2D7 Ensembl:ENST00000542457
HOGENOM:HOG000293317 Uniprot:A7E2D7
Length = 1731
Score = 815 (292.0 bits), Expect = 2.2e-79, Sum P(4) = 2.2e-79
Identities = 164/382 (42%), Positives = 224/382 (58%)
Query: 433 PTGITFSTTQVRTKFPFLLKFPLREYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTIA 492
P G TT V+ P LL LR+YQ IGLDWL +Y K LNGILADE GLGKT+ IA
Sbjct: 1033 PKGSARVTTSVKFNAPSLLYGALRDYQKIGLDWLAKLYRKNLNGILADEAGLGKTVQIIA 1092
Query: 493 MLAHLACEKGIWGPHLIVVPTSVMLNWETEFLKWCPAFKILTYFGSAKERKFKRQGWLKP 552
AHLAC +G WGPHL+VV + +L WE E +WCP KIL+Y GS +E K KRQ W +P
Sbjct: 1093 FFAHLACNEGNWGPHLVVVRSCNILKWELELKRWCPGLKILSYIGSHRELKAKRQEWAEP 1152
Query: 553 NSFHVCITTYRLIIQDSKVFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTG 612
NSFHVCIT+Y + F R +WK L++DE +K + W+ + S++R+LL
Sbjct: 1153 NSFHVCITSYTQFFRGLTAFTRVRWKCLVIDEMQRVKGMTERHWEAVFTLQSQQRLLLID 1212
Query: 613 TPLQNDLMELWSLMHFLMPHIFQSHQEFKDWFCNPISGMVEGQEKVNKEVVDRLHNVLRP 672
+PL N +ELW+++HFL+P I + + +P+ E + +VV RLH V +P
Sbjct: 1213 SPLHNTFLELWTMVHFLVPGIS------RPYLSSPLRAPSEESQDYYHKVVIRLHRVTQP 1266
Query: 673 FILRRLKRDVEKQLPMKQEHVIYCRLSKRQRNLYEDFIASSETQATLASANFFGMISVIM 732
FILRR KRDVEKQL K EHV+ CRLS RQ+ LYED I TQ L S +F ++S+++
Sbjct: 1267 FILRRTKRDVEKQLTKKYEHVLKCRLSNRQKALYEDVILQPGTQEALKSGHFVNVLSILV 1326
Query: 733 QLRKVCNHPDLFEGRPIVSSFDMSGIDXXXXXXXXXXXXXXXXXTADLKGLGLLFTNLDF 792
+L+++CNHP L E R SS+ ++ ADL L+ L+
Sbjct: 1327 RLQRICNHPGLVEPRHPGSSYVAGPLEYPSASLILKALERDFWKEADLSMFDLI--GLEN 1384
Query: 793 SMNSWESDELNAIATPASLIKE 814
+ E++ L+ P L++E
Sbjct: 1385 KITRHEAELLSKKKIPRKLMEE 1406
Score = 92 (37.4 bits), Expect = 2.2e-79, Sum P(4) = 2.2e-79
Identities = 28/100 (28%), Positives = 54/100 (54%)
Query: 22 VAVNISKDVKKFWMKIEKLVLYKHQMEVDVRKKKALDKQLEFLLGQTERYSSM--LAENL 79
+A + +++++ FW IE++V K ++E++ ++KKAL+ Q G+ R L E+
Sbjct: 833 IAASTAREIECFWSNIEQVVEIKLRVELEEKRKKALNLQKVSRRGKELRPKGFDALQESS 892
Query: 80 VDSHKPVQQSPMREQPGIQYKEADENGAEEPGVQSKEADE 119
+DS S + + I + DE EE ++ +EA+E
Sbjct: 893 LDSG----MSGRKRKASISLTD-DEVDDEEETIEEEEANE 927
Score = 47 (21.6 bits), Expect = 1.1e-74, Sum P(4) = 1.1e-74
Identities = 17/53 (32%), Positives = 26/53 (49%)
Query: 188 KRYA-VDKVGRESSAEMGEDEAEPTVVEE-GHVQGNGNDLLAGSKLDTSGSLV 238
K YA + R++ ++ E+E E EE V + LAGS + +GS V
Sbjct: 409 KHYAPLQAYLRQNDLDIEEEEEEEEEEEEKSEVINDEQQALAGSLVAGAGSTV 461
Score = 47 (21.6 bits), Expect = 1.1e-74, Sum P(4) = 1.1e-74
Identities = 17/59 (28%), Positives = 26/59 (44%)
Query: 182 PLQELLKRYAVDKVGRESSAEMGEDEAEPTVVEEGHVQGNGNDLLAGSKLDTSGSLVRR 240
PLQ L++ +D + E E E+E E + V Q L+AG+ L +R
Sbjct: 413 PLQAYLRQNDLD-IEEEEEEE--EEEEEKSEVINDEQQALAGSLVAGAGSTVETDLFKR 468
Score = 43 (20.2 bits), Expect = 2.2e-79, Sum P(4) = 2.2e-79
Identities = 8/20 (40%), Positives = 15/20 (75%)
Query: 322 EIALLQKESEIPVEELLARY 341
E++ L KE+E+P+ +L+ Y
Sbjct: 935 ELSNLAKEAELPLLDLMKLY 954
Score = 43 (20.2 bits), Expect = 2.2e-79, Sum P(4) = 2.2e-79
Identities = 10/31 (32%), Positives = 16/31 (51%)
Query: 856 QDRASSVAWWNSLRCQKKPVYSTSLRELLTV 886
++R + N RC + PVY R+LL +
Sbjct: 1630 KERLDQIYLVNERRCSQAPVYG---RDLLRI 1657
>FB|FBgn0250786 [details] [associations]
symbol:Chd1 "Chromodomain-helicase-DNA-binding protein 1"
species:7227 "Drosophila melanogaster" [GO:0005705 "polytene
chromosome interband" evidence=IDA] [GO:0004386 "helicase activity"
evidence=ISS] [GO:0003682 "chromatin binding" evidence=IDA]
[GO:0005703 "polytene chromosome puff" evidence=IDA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0035042 "fertilization,
exchange of chromosomal proteins" evidence=IMP] [GO:0048477
"oogenesis" evidence=IMP] [GO:0007476 "imaginal disc-derived wing
morphogenesis" evidence=IMP] InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR002464 Pfam:PF00176 Pfam:PF00271
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298
SMART:SM00490 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
EMBL:AE014134 GO:GO:0006355 GO:GO:0003677 GO:GO:0048477
GO:GO:0006351 GO:GO:0003682 GO:GO:0004386 GO:GO:0007476
InterPro:IPR016197 SUPFAM:SSF54160 HSSP:Q97XQ5 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598 GO:GO:0005703
InterPro:IPR025260 Pfam:PF13907 EMBL:L77907 PIR:T13944
RefSeq:NP_477197.1 ProteinModelPortal:Q7KU24 SMR:Q7KU24
STRING:Q7KU24 PaxDb:Q7KU24 PRIDE:Q7KU24 EnsemblMetazoa:FBtr0077674
GeneID:33505 KEGG:dme:Dmel_CG3733 UCSC:CG3733-RA CTD:1105
FlyBase:FBgn0250786 GeneTree:ENSGT00560000076896 InParanoid:Q7KU24
KO:K11367 OrthoDB:EOG45MKM5 PhylomeDB:Q7KU24 ChiTaRS:CHD1
GenomeRNAi:33505 NextBio:783939 Bgee:Q7KU24 GO:GO:0005705
GO:GO:0035042 Uniprot:Q7KU24
Length = 1883
Score = 515 (186.3 bits), Expect = 3.0e-79, Sum P(4) = 3.0e-79
Identities = 119/327 (36%), Positives = 186/327 (56%)
Query: 441 TQVRTKFPFLLK-FPLREYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTIAMLAHLAC 499
++++ + FL LR+YQ GL+WL+ + K + ILADEMGLGKTI TI L L
Sbjct: 513 SRIKNQPEFLSSGLTLRDYQMDGLNWLLHSWCKENSVILADEMGLGKTIQTICFLYSLFK 572
Query: 500 EKGIWGPHLIVVPTSVMLNWETEFLKWCPAFKILTYFGSAKERKFKRQ-GWLKPNS---- 554
++GP L VVP S M W+ EF W P ++TY G K R+ +Q W +S
Sbjct: 573 IHHLYGPFLCVVPLSTMTAWQREFDLWAPDMNVVTYLGDIKSRELIQQYEWQFESSKRLK 632
Query: 555 FHVCITTYRLIIQDSKVFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTP 614
F+ +TTY ++++D + +W L++DEAH +KN S +++L F++ R+L+TGTP
Sbjct: 633 FNCILTTYEIVLKDKQFLGTLQWAALLVDEAHRLKNDDSLLYKSLKEFDTNHRLLITGTP 692
Query: 615 LQNDLMELWSLMHFLMPHIFQSHQEFKDWFCNPISGMVEGQEKVNKEVVDRLHNVLRPFI 674
LQN L ELW+L+HF+MP F + + F+ V+ +K RLH L P+I
Sbjct: 693 LQNSLKELWALLHFIMPDKFDTWENFE----------VQHGNAEDKGYT-RLHQQLEPYI 741
Query: 675 LRRLKRDVEKQLPMKQEHVIYCRLSKRQRNLYEDFIASSET---QATLASANFFGMISVI 731
LRR+K+DVEK LP K E ++ ++ Q+ Y+ + + + S + F ++++
Sbjct: 742 LRRVKKDVEKSLPAKVEQILRVEMTSLQKQYYKWILTKNFDALRKGKRGSTSTF--LNIV 799
Query: 732 MQLRKVCNHPDLFEGRPIVSSFDMSGI 758
++L+K CNH L RP S F++ G+
Sbjct: 800 IELKKCCNHAALI--RP--SEFELMGL 822
Score = 393 (143.4 bits), Expect = 3.0e-79, Sum P(4) = 3.0e-79
Identities = 79/151 (52%), Positives = 105/151 (69%)
Query: 996 GKLQELAILLRKLKSDGHRALIFTQMTKMLDILEEFISLYGYTYMRLDGSTQPEERQTLM 1055
GKL L LL +LK GHR LIF+QM +MLD+L +++ + + RLDGS + E R+ +
Sbjct: 836 GKLVLLDKLLCRLKETGHRVLIFSQMVRMLDVLADYLQKRHFPFQRLDGSIKGEMRRQAL 895
Query: 1056 QRFNTN-PKIFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQDRCHRIGQTREV 1114
FN + F F+LSTR+GG+GINL ADTVI +DSDWNP D QAQ R HRIGQ +V
Sbjct: 896 DHFNAEGSQDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAQARAHRIGQKNQV 955
Query: 1115 HIYRLISESTIEENILKKANQKRALDDLVIQ 1145
+IYRL++ ++EE I+++A QK LD LVIQ
Sbjct: 956 NIYRLVTARSVEEQIVERAKQKMVLDHLVIQ 986
Score = 54 (24.1 bits), Expect = 3.0e-79, Sum P(4) = 3.0e-79
Identities = 30/117 (25%), Positives = 45/117 (38%)
Query: 188 KRYAVDKVGRESSAEMGE-DEAEPTVVEEGHVQGNGNDLLAGSKLDTSGSLVRRCDEING 246
+ +++ SS E +E E E G Q +D A D+S ++ +
Sbjct: 115 RNQSINNANTSSSLPKPEQNEEEDNETEAGQQQP-ASDASADESSDSSANVSPTSSSSSS 173
Query: 247 GLSISENHLLDIETSQVR------DTSKKSGASTQKQALYDF--SDEQEDGDFVVAT 295
E T Q R + SKK+ A K+ +D SDE ED D V+T
Sbjct: 174 --EEEEEDYRPKRTRQARKPPTAAEKSKKAPAPKNKKKTWDSDESDESEDSDDEVST 228
Score = 48 (22.0 bits), Expect = 3.0e-79, Sum P(4) = 3.0e-79
Identities = 13/51 (25%), Positives = 26/51 (50%)
Query: 1564 PVKRVLMIKPEKLKKGNVWSRDCVPSPDV-WLPQEDAILCAVVHEYG-PNW 1612
P+ ++ PE+ ++ + + P DV W +ED L +++YG +W
Sbjct: 1294 PLNEIMPSMPEERQQWSFNIKTRAPVFDVDWGIEEDTKLLCGIYQYGIGSW 1344
Score = 47 (21.6 bits), Expect = 1.6e-78, Sum P(4) = 1.6e-78
Identities = 22/91 (24%), Positives = 37/91 (40%)
Query: 198 ESSAEMGEDEAEPTVVEEGHVQGNGNDLLAGSKLDTSGSLVRRCDEINGGLSISENHLLD 257
ES+ +G DE + T E +G+ +GS S S + G S E
Sbjct: 7 ESANSIGSDEQDDTREEANGTDHSGSGSGSGSSGSDSDS-DSSSGNSSDGRSSPEPEDKS 65
Query: 258 IETSQVRDTSKKSGASTQKQALYDFSDEQED 288
+ + T+ + A ++ F+D+QED
Sbjct: 66 LSVAGFPPTAAAAQADSKTNG---FTDDQED 93
Score = 46 (21.3 bits), Expect = 2.0e-78, Sum P(4) = 2.0e-78
Identities = 25/100 (25%), Positives = 38/100 (38%)
Query: 28 KDVKKFWMKIEKLVLYKHQMEVDV--RKKKALDKQLEFLLGQTE--RYSSMLAENLVDSH 83
K+ KK W E EV ++K A L Q + R +E+ D
Sbjct: 205 KNKKKTWDSDESDESEDSDDEVSTAQKRKPAATTSRSKLAQQQQRRRVKPFSSEDSDDDD 264
Query: 84 KPVQQSPMREQPGIQYKEADENGA-EEPGVQSKEADEDDA 122
+ + R+ + YKEA E+ A + + E DE A
Sbjct: 265 ASKRCATRRKGAAVSYKEASEDEATDSEDLLEFEYDESQA 304
Score = 39 (18.8 bits), Expect = 2.6e-78, Sum P(4) = 2.6e-78
Identities = 8/38 (21%), Positives = 18/38 (47%)
Query: 1715 GCRQNFSSSRNGLYLGGSFFSSVTQTSCKSTREPARRV 1752
G +Q + + + LGG F++ +C+ +P +
Sbjct: 1261 GAKQRRARATFSVKLGGVSFNAKKLLACEQELQPLNEI 1298
Score = 38 (18.4 bits), Expect = 1.4e-77, Sum P(4) = 1.4e-77
Identities = 10/32 (31%), Positives = 17/32 (53%)
Query: 257 DIETSQVRDTSKKSGASTQKQALYDFSDEQED 288
D + S+ T +K A + K+A D + + ED
Sbjct: 262 DDDASKRCATRRKGAAVSYKEASEDEATDSED 293
>UNIPROTKB|F1RN66 [details] [associations]
symbol:CHD1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
InterPro:IPR025260 Pfam:PF13907 GeneTree:ENSGT00560000076896
EMBL:CU570924 EMBL:CU928692 Ensembl:ENSSSCT00000015489
Uniprot:F1RN66
Length = 1794
Score = 526 (190.2 bits), Expect = 5.1e-79, Sum P(4) = 5.1e-79
Identities = 111/292 (38%), Positives = 169/292 (57%)
Query: 455 LREYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTIAMLAHLACEKGIWGPHLIVVPTS 514
LR+YQ GL+WL + K + ILADEMGLGKTI TI+ L +L E ++GP L+VVP S
Sbjct: 475 LRDYQLNGLNWLAHSWCKGNSCILADEMGLGKTIQTISFLNYLFHEHQLYGPFLLVVPLS 534
Query: 515 VMLNWETEFLKWCPAFKILTYFGSAKERKFKR-QGWLKPNS----FHVCITTYRLIIQDS 569
+ +W+ E W + Y G R R W+ P + F++ +TTY ++++D
Sbjct: 535 TLTSWQREIQTWASQMNAVVYLGDINSRNMIRTHEWMHPQTKRLKFNILLTTYEILLKDK 594
Query: 570 KVFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPLQNDLMELWSLMHFL 629
W ++ +DEAH +KN S ++TL++F S R+L+TGTPLQN L ELWSL+HF+
Sbjct: 595 AFLGGLNWAFIGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSLLHFI 654
Query: 630 MPHIFQSHQEFKDWFCNPISGMVEGQEKVNKEVVDRLHNVLRPFILRRLKRDVEKQLPMK 689
MP F S ++F++ G G ++KE L PF+LRR+K+DVEK LP K
Sbjct: 655 MPEKFSSWEDFEE---EHGKGREYGYASLHKE--------LEPFLLRRVKKDVEKSLPAK 703
Query: 690 QEHVIYCRLSKRQRNLYEDFIASSETQATLAS-ANFFGMISVIMQLRKVCNH 740
E ++ +S Q+ Y+ + + + S + G ++++M+L+K CNH
Sbjct: 704 VEQILRMEMSALQKQYYKWILTRNYKALSKGSKGSTSGFLNIMMELKKCCNH 755
Score = 375 (137.1 bits), Expect = 5.1e-79, Sum P(4) = 5.1e-79
Identities = 76/151 (50%), Positives = 105/151 (69%)
Query: 996 GKLQELAILLRKLKSDGHRALIFTQMTKMLDILEEFISLYGYTYMRLDGSTQPEERQTLM 1055
GKL L LL +L+ G+R LIF+QM +MLDIL E++ + + RLDGS + E R+ +
Sbjct: 782 GKLILLDKLLIRLRERGNRVLIFSQMVRMLDILAEYLKYRQFPFQRLDGSIKGELRKQAL 841
Query: 1056 QRFNTN-PKIFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQDRCHRIGQTREV 1114
FN + F F+LSTR+GG+GINL ADTV+ +DSDWNP D QAQ R HR G +V
Sbjct: 842 DHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRHGYLSQV 901
Query: 1115 HIYRLISESTIEENILKKANQKRALDDLVIQ 1145
+IYRL+++ ++EE+IL++A +K LD LVIQ
Sbjct: 902 NIYRLVTKGSVEEDILERAKKKMVLDHLVIQ 932
Score = 56 (24.8 bits), Expect = 5.1e-79, Sum P(4) = 5.1e-79
Identities = 12/39 (30%), Positives = 25/39 (64%)
Query: 86 VQQSPM-REQPGIQYKEADENGAEEPGVQSKEADEDDAE 123
VQ+S M ++Q Q++ + +G+EE S+++D+ +E
Sbjct: 96 VQRSAMLKKQQQQQHQASSNSGSEEDSSSSEDSDDSSSE 134
Score = 49 (22.3 bits), Expect = 5.1e-79, Sum P(4) = 5.1e-79
Identities = 12/55 (21%), Positives = 28/55 (50%)
Query: 1563 MPVKRVLMIKPEKLKKGNVWSRDCVPSPDV-WLPQEDAILCAVVHEYG-PNWSLV 1615
+P+ + + PE+ K+ + D+ W ++D+ L ++EYG +W ++
Sbjct: 1216 IPLHKSIPSDPEERKQYTIPCHTKAAHFDIDWGKEDDSNLLIGIYEYGYGSWEMI 1270
Score = 49 (22.3 bits), Expect = 2.7e-78, Sum P(4) = 2.7e-78
Identities = 15/56 (26%), Positives = 24/56 (42%)
Query: 198 ESSAEMGEDEAEPTVVEEGHVQGNGNDLLAGSKLDTSGSLVRRCDEINGGLSISEN 253
E S E+ + + G G+G+ +GS D S S D +G S S++
Sbjct: 7 EESVRNSSGESSQSDDDSGSASGSGSGSSSGSSSDGSSSQSGSSDSDSGSESGSQS 62
Score = 42 (19.8 bits), Expect = 1.5e-77, Sum P(4) = 1.5e-77
Identities = 11/40 (27%), Positives = 19/40 (47%)
Query: 98 QYKEADENGAEEPGVQSK-EADEDDAEQHSGFEPQLDAAD 136
Q +D + E G QS+ E+D + P++D A+
Sbjct: 46 QSGSSDSDSGSESGSQSESESDNSRENKVQAKPPKVDGAE 85
Score = 38 (18.4 bits), Expect = 4.8e-44, Sum P(3) = 4.8e-44
Identities = 12/31 (38%), Positives = 14/31 (45%)
Query: 1580 NVWSRDCVPSPDV-WLPQEDAILCAVVHEYG 1609
N+ S D V D W PQ D A H +G
Sbjct: 866 NLASADTVVIFDSDWNPQNDLQAQARAHRHG 896
>POMBASE|SPAC20G8.08c [details] [associations]
symbol:fft1 "fun thirty related protein Fft1
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0000790
"nuclear chromatin" evidence=NAS] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0004003 "ATP-dependent DNA helicase activity"
evidence=ISM] [GO:0005524 "ATP binding" evidence=ISM] [GO:0005634
"nucleus" evidence=IDA] [GO:0006338 "chromatin remodeling"
evidence=ISS] InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 PomBase:SPAC20G8.08c
GO:GO:0005524 EMBL:CU329670 GenomeReviews:CU329670_GR GO:GO:0003677
GO:GO:0006338 GO:GO:0000790 GO:GO:0004003 HSSP:Q97XQ5
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0016585 PIR:T38130 RefSeq:NP_593325.1
ProteinModelPortal:P87114 EnsemblFungi:SPAC20G8.08c.1
GeneID:2541983 KEGG:spo:SPAC20G8.08c OrthoDB:EOG4BCHW4
NextBio:20803065 Uniprot:P87114
Length = 944
Score = 530 (191.6 bits), Expect = 1.0e-78, Sum P(3) = 1.0e-78
Identities = 123/299 (41%), Positives = 183/299 (61%)
Query: 455 LREYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTIAMLAHLACEKGIWGPHLIVVPTS 514
L+ YQ +GL+WL MY+ +L+GILADEMGLGKT I+ LA L EKGI HL+VVP+S
Sbjct: 414 LKSYQIVGLNWLCLMYKAKLSGILADEMGLGKTCQVISFLASLK-EKGIQNRHLVVVPSS 472
Query: 515 VMLNWETEFLKWCPAFKILTYFGSAKERKFKRQGWLKPNSFHVCITTYRLII--QDSKVF 572
+ NW EF K+CP+ ++ +Y G+ ER KR +L F V +TTY+L +D + F
Sbjct: 473 TLGNWLREFEKFCPSLRVESYSGTQSERINKRY-YLMDTDFDVLVTTYQLASGSRDDRSF 531
Query: 573 KRK-KWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPLQNDLMELWSLMHFLMP 631
RK ++ I DE H +KN S+R++ L+N + R+L+TGTPLQN+L EL SL+ F++P
Sbjct: 532 LRKQRFDISIFDEGHYLKNRMSERYKHLMNIPANFRLLITGTPLQNNLKELISLLAFMLP 591
Query: 632 HIFQSHQEFKDWFCNPISGMVEGQ-EK--VNKEVVDRLHNVLRPFILRRLKRDVEKQLPM 688
+F ++ + D I +G E+ +++E + R ++ PFILRR K +V LP
Sbjct: 592 KVFDNNMQGLD-IIYKIKTTSDGDIERAYLSQERISRAKTIMNPFILRRRKENVLSDLPP 650
Query: 689 KQEHVIYCRLSKRQRNLYEDFIASSETQATLASANFFGMISVIMQLRKVCNHPDLFEGR 747
K +HV YC + + Q +LY ++ E + L +AN +++MQLRK H LF +
Sbjct: 651 KIQHVEYCHMEETQLSLY---LSVLELK-NLVNAN---RENILMQLRKAALHQLLFRSQ 702
Score = 363 (132.8 bits), Expect = 1.0e-78, Sum P(3) = 1.0e-78
Identities = 74/147 (50%), Positives = 103/147 (70%)
Query: 994 DCGKLQELAILLRKLKSDGHRALIFTQMTKMLDILEEFISLYGYTYMRLDGSTQPEERQT 1053
D K+++L LL+K + + R LIF+Q T++LDILE ++ ++RLDGST E RQ
Sbjct: 763 DSAKVKKLCSLLKKSRPN-ERILIFSQFTQVLDILEYVLNTLDLEFLRLDGSTPVETRQQ 821
Query: 1054 LMQRFNTNPKIFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQDRCHRIGQTRE 1113
L+ F+TN +F+LST+SGG GINL A+ VI +D +NP D QA+DR HR+GQTR
Sbjct: 822 LIDDFHTNENYKVFLLSTKSGGFGINLTCANIVILFDCSFNPFDDMQAEDRAHRVGQTRP 881
Query: 1114 VHIYRLISESTIEENILKKANQKRALD 1140
VH+YRLI+++TIEENI + AN K L+
Sbjct: 882 VHVYRLITKNTIEENIRRLANTKLTLE 908
Score = 39 (18.8 bits), Expect = 1.0e-78, Sum P(3) = 1.0e-78
Identities = 7/33 (21%), Positives = 16/33 (48%)
Query: 61 LEFLLGQTERYSSMLAENLVDSHKPVQQSPMRE 93
++ L+ + ERY +M++ + H M +
Sbjct: 355 VDSLIAKCERYGAMISNTMRSWHNLFDDKKMEQ 387
Score = 37 (18.1 bits), Expect = 1.3e-44, Sum P(3) = 1.3e-44
Identities = 11/45 (24%), Positives = 20/45 (44%)
Query: 1201 EDEADYMALKRAEQEEAVDNQEFTEEAVGRPEDDELVIEDTVRTD 1245
ED A + R + + EE + R + +L +E ++ TD
Sbjct: 870 EDRAHRVGQTRPVHVYRLITKNTIEENIRRLANTKLTLESSLTTD 914
>POMBASE|SPCC1235.05c [details] [associations]
symbol:fft2 "fun thirty related protein Fft2
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0000790
"nuclear chromatin" evidence=NAS] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0004003 "ATP-dependent DNA helicase activity"
evidence=ISM;ISS] [GO:0005524 "ATP binding" evidence=ISM]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006338 "chromatin remodeling" evidence=NAS]
[GO:0051276 "chromosome organization" evidence=ISS]
InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 PomBase:SPCC1235.05c GO:GO:0005829
GO:GO:0005524 EMBL:CU329672 GenomeReviews:CU329672_GR GO:GO:0003677
GO:GO:0006338 GO:GO:0000790 GO:GO:0004003 HSSP:Q97XQ5
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0016585 OrthoDB:EOG4BCHW4 PIR:T40879 RefSeq:NP_587731.1
ProteinModelPortal:O74842 STRING:O74842 EnsemblFungi:SPCC1235.05c.1
GeneID:2539045 KEGG:spo:SPCC1235.05c KO:K14439 NextBio:20800219
Uniprot:O74842
Length = 1284
Score = 505 (182.8 bits), Expect = 1.1e-78, Sum P(2) = 1.1e-78
Identities = 114/311 (36%), Positives = 178/311 (57%)
Query: 455 LREYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTIAMLAHLACEKGIWGPHLIVVPTS 514
L+ YQ +G++WL +Y+++L+GILADEMGLGKT +A A L E+G GPHL+VVP+S
Sbjct: 550 LKSYQLVGVNWLHLLYQQKLSGILADEMGLGKTCQVVAFFA-LLLEQGHHGPHLVVVPSS 608
Query: 515 VMLNWETEFLKWCPAFKILTYFGSAKERKFKRQGWLKPNS--FHVCITTYRLII---QDS 569
+ NW E ++CP+ ++ Y+GS +ER R+ ++ N + + +TTY+L +D
Sbjct: 609 TLENWLRELARFCPSLRVEPYYGSQQERANIREA-IEENEIKYDILVTTYQLATNNKEDR 667
Query: 570 KVFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPLQNDLMELWSLMHFL 629
K + + + DE H +KN S+R++ L+N N+ R+LLTGTPLQN+L EL SL+ F+
Sbjct: 668 SFLKHQNFDVCVYDEGHYLKNRMSERYKHLMNLNANFRLLLTGTPLQNNLKELVSLLAFI 727
Query: 630 MPHIFQSHQEFKD--WFCNPISGMVEGQEKVNKEVVDRLHNVLRPFILRRLKRDVEKQLP 687
+P++F S + D + P + Q ++K+ + R ++ PF+LRR K V LP
Sbjct: 728 LPNMFDSDMDDLDVIFKAKPTADADIEQALLSKQRISRAKTMMTPFVLRRRKNQVLNDLP 787
Query: 688 MKQEHVIYCRLSKRQRNLYEDFIASSETQA-------TLASAN-------FFGMISVIMQ 733
K + + +C+LS+ Q +Y + A + Q S N V+MQ
Sbjct: 788 KKTQIIEHCKLSENQLEIYNRYAALQKNQQLRRDDKRNKRSKNDEESDGKSLSAGHVLMQ 847
Query: 734 LRKVCNHPDLF 744
LRK NH LF
Sbjct: 848 LRKAANHALLF 858
Score = 386 (140.9 bits), Expect = 1.1e-78, Sum P(2) = 1.1e-78
Identities = 88/205 (42%), Positives = 129/205 (62%)
Query: 994 DCGKLQELAILLRKLKSDGHRALIFTQMTKMLDILEEFISLYGYTYMRLDGSTQPEERQT 1053
D GK++ L LL K+K +G R L+F+Q T+MLDILE+ + +Y+RLDGSTQ E RQ
Sbjct: 922 DSGKIRVLKELLPKMKEEGSRILLFSQFTQMLDILEQVLDTLKISYVRLDGSTQVEVRQD 981
Query: 1054 LMQRFNTNPKIFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQDRCHRIGQTRE 1113
++ +F+ + +F+LST++GG GINL A+ VI YD +NP D QA+DR HR+GQ RE
Sbjct: 982 IIDQFHKEEDVTVFLLSTKAGGFGINLACANVVILYDCSYNPFDDLQAEDRAHRVGQVRE 1041
Query: 1114 VHIYRLISESTIEENILKKANQKRALDDLVIQSGGYNTEFFKKL--DPM-ELFSGHRTLP 1170
V + RLI+++TIEE I K AN K ALD + G E ++L D + E +G+ T P
Sbjct: 1042 VTVIRLITDNTIEEYIQKLANTKLALDMSLSSDGKDREEIGERLVQDMLDEENNGNNTKP 1101
Query: 1171 MKTMQK---EKAINNGNEVSLSNAD 1192
T + E +++ N ++A+
Sbjct: 1102 EITGNESDGEFKVSSSNNSKQTDAE 1126
Score = 38 (18.4 bits), Expect = 4.6e-42, Sum P(2) = 4.6e-42
Identities = 10/22 (45%), Positives = 15/22 (68%)
Query: 1522 KLSRKRHDGSTELKTCESIFID 1543
K+S R DGST+++ + I ID
Sbjct: 964 KISYVRLDGSTQVEVRQDI-ID 984
>RGD|1311935 [details] [associations]
symbol:Chd1l "chromodomain helicase DNA binding protein 1-like"
species:10116 "Rattus norvegicus" [GO:0000166 "nucleotide binding"
evidence=ISO] [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0005886 "plasma membrane"
evidence=ISO] [GO:0006200 "ATP catabolic process" evidence=ISO]
[GO:0006338 "chromatin remodeling" evidence=ISO] [GO:0006974
"response to DNA damage stimulus" evidence=ISO] [GO:0016887 "ATPase
activity" evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 RGD:1311935 GO:GO:0005886
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0003677
GO:GO:0006974 GO:GO:0016887 GO:GO:0006338 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR002589
PROSITE:PS51154 OrthoDB:EOG4SXNBV GeneTree:ENSGT00670000098110
IPI:IPI00560655 Ensembl:ENSRNOT00000043937 UCSC:RGD:1311935
ArrayExpress:D4ACG6 Uniprot:D4ACG6
Length = 903
Score = 498 (180.4 bits), Expect = 1.9e-78, Sum P(3) = 1.9e-78
Identities = 113/293 (38%), Positives = 166/293 (56%)
Query: 455 LREYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTIAMLAHLACEKGIWGPHLIVVPTS 514
LR YQ G++WLV + + IL DEMGLGKT TIA+L +L GP LI+ P S
Sbjct: 40 LRSYQLEGVNWLVQCFHGQNGCILGDEMGLGKTCQTIALLIYLVGRLNDEGPFLILCPLS 99
Query: 515 VMLNWETEFLKWCPAFKILTYFGSAKERKFKRQGWLKPNSFHVCITTYRLIIQDSKVFKR 574
V+ NW+ E ++ P +TY G +ER ++Q + + FHV +TTY + ++D+ K
Sbjct: 100 VLSNWKEEMERFAPGLSCVTYTGDKEERARRQQDLRQESGFHVLLTTYEICLKDASFLKS 159
Query: 575 KKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPLQNDLMELWSLMHFLMPHIF 634
W L +DEAH +KN S +TL F+ R+LLTGTP+QN L EL+SL+ + P +F
Sbjct: 160 FSWSVLAVDEAHRLKNQSSLLHRTLSEFSVVFRLLLTGTPIQNSLQELYSLLSVVEPDLF 219
Query: 635 QSHQEFKDWF-CNPISGMVEGQEKVNKEVVDRLHNVLRPFILRRLKRDVEKQLPMKQEHV 693
++ +D+ C + EK +K + LH +LRPF+LRR+K V +LP K E V
Sbjct: 220 -CREQVEDFVQC------YQDIEKESKSASE-LHRLLRPFLLRRVKAQVATELPKKTEVV 271
Query: 694 IYCRLSKRQRNLYEDFIASSETQATLASANFFGMISVIMQLRKVCNHPDLFEG 746
IY +S Q+ Y+ + +A + +V+ QLRK +HP LF+G
Sbjct: 272 IYHGMSALQKKYYKAILMKDLDAFENETAKKVKLQNVLTQLRKCVDHPYLFDG 324
Score = 394 (143.8 bits), Expect = 1.9e-78, Sum P(3) = 1.9e-78
Identities = 98/257 (38%), Positives = 148/257 (57%)
Query: 996 GKLQELAILLRKLKSDGHRALIFTQMTKMLDILEEFISLYGYTYMRLDGSTQPEERQTLM 1055
GKL L LL L S GHR L+F+QMT MLDIL++++ GY+Y R+DGS + EER +
Sbjct: 341 GKLHLLDRLLAFLYSGGHRVLLFSQMTHMLDILQDYMDYRGYSYERVDGSVRGEERHLAI 400
Query: 1056 QRFNTNPKIFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQDRCHRIGQTREVH 1115
+ F P IF+F+LSTR+GGVG+NL ADTVIF DSD+NP D QA R HRIGQ + V
Sbjct: 401 KNFGKQP-IFVFLLSTRAGGVGMNLTAADTVIFVDSDFNPQNDLQAAARAHRIGQNKSVK 459
Query: 1116 IYRLISESTIEENILKKANQKRALDDLVIQSGGYNTEFFKKLDPMELFSGHRTLPMKTMQ 1175
+ RLI T+EE + +KA K L ++VI+ G + K +L + +
Sbjct: 460 VIRLIGRDTVEEIVYRKAASKLQLTNMVIEGGHFTLGAQKPAAEADL----QLSEILKFG 515
Query: 1176 KEKAINNGNEVSLSNADVEAALKCVED-EADYMALKRAEQEEAVDNQEFTE-EAVGRPED 1233
+K +++ S+ D+++ L +D + AL A + E+ + +E +E + G+ E+
Sbjct: 516 LDKLLSSEGS-SMDEIDLKSILGETKDGQWTPDALPAAAEGESREQEEGSELNSYGK-EN 573
Query: 1234 DELVIEDTVRTDEPTDQ 1250
+ E + EP+ +
Sbjct: 574 HMYLFEGRDYSKEPSKE 590
Score = 38 (18.4 bits), Expect = 1.9e-78, Sum P(3) = 1.9e-78
Identities = 13/39 (33%), Positives = 22/39 (56%)
Query: 1544 LEQKS-ASRS-KMGGKISITAM---PVKRVLMIKPEKLK 1577
LE+ S RS + G + I + P+KR ++ PE+L+
Sbjct: 606 LEKTSHGGRSLRNKGSVLIPGLAEGPIKRKKILSPEELE 644
>UNIPROTKB|J9P9W7 [details] [associations]
symbol:SRCAP "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR017956
Pfam:PF00271 PROSITE:PS51194 SMART:SM00384 SMART:SM00490
GO:GO:0005524 GO:GO:0003677 InterPro:IPR020478 PRINTS:PR00929
GO:GO:0004386 GeneTree:ENSGT00530000063427 EMBL:AAEX03004381
EMBL:AAEX03004385 EMBL:AAEX03004386 EMBL:AAEX03004382
EMBL:AAEX03004383 EMBL:AAEX03004384 EMBL:AAEX03004387
EMBL:AAEX03004388 Ensembl:ENSCAFT00000045283 OMA:PATANNS
Uniprot:J9P9W7
Length = 1470
Score = 815 (292.0 bits), Expect = 2.1e-78, Sum P(2) = 2.1e-78
Identities = 168/358 (46%), Positives = 224/358 (62%)
Query: 874 PVYSTSLRELLTVKHPVCDILQQKTVRRSY----LYSSKLADIVLSPVERFQRMIGLVES 929
PVY T + + T+ PV + ++ S+ Y+ VL P +R ++ ++E
Sbjct: 159 PVYGTEVLDFCTLPQPVASPIGPRSPGPSHPTFWTYTEAARQAVLFPQQRLDQLSEIIER 218
Query: 930 FMFAIPAARAPAPVCW-CSKSGASVFLQPTYKEKCSEVLSPLLFPIRPAIVRRQVYFPDR 988
F+F +P AP P C Q ++E+ + L P P+ + + FPD
Sbjct: 219 FIFVMPPVEAPPPSLHACHPPPWLAPRQAAFQEQLACELWPRARPLHRIVCNMRTQFPDL 278
Query: 989 RLIQFDCGKLQELAILLRKLKSDGHRALIFTQMTKMLDILEEFISLYGYTYMRLDGSTQP 1048
RLIQ+DCGKLQ LA+LLR+LK++GHR LIFTQMT+MLD+LE+F++ +G+ Y+RLDGST+
Sbjct: 279 RLIQYDCGKLQTLAVLLRQLKAEGHRVLIFTQMTRMLDVLEQFLTYHGHLYLRLDGSTRV 338
Query: 1049 EERQTLMQRFNTNPKIFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQDRCHRI 1108
E+RQ LM+RFN + +IF FILSTRSGGVG+NL GADTV+FYDSDWNP MD QAQDRCHRI
Sbjct: 339 EQRQALMERFNADKRIFCFILSTRSGGVGVNLTGADTVVFYDSDWNPTMDAQAQDRCHRI 398
Query: 1109 GQTREVHIYRLISESTIEENILKKANQKRALDDLVIQSGGYNTEFFKKLDPMELFSGHRT 1168
GQTR+VHIYRLISE T+EENILKKANQKR L D+ I+ G + T +FK+ ELF
Sbjct: 399 GQTRDVHIYRLISERTVEENILKKANQKRMLGDMAIEGGNFTTAYFKQQTIRELFDMPLE 458
Query: 1169 LPMKTMQKEKAINNGNEVSLSNADV-EAALKCVEDEADYMALKRAEQEEAVDNQEFTE 1225
P + V+ + E AL EDE D A +A+ E+ + EF E
Sbjct: 459 EPSGSSVPSAPEEEEETVASKQTHILEQALCRAEDEEDIRAATQAKAEQVAELAEFNE 516
Score = 65 (27.9 bits), Expect = 2.1e-78, Sum P(2) = 2.1e-78
Identities = 15/52 (28%), Positives = 31/52 (59%)
Query: 1302 EAISSFENQLRPIDRYAIRFLEL-WDPIIDKTAVESEVKFEEREWELDRIEK 1352
+ I++ QL PI+RYA++FLE + + + ++E + E +LD+ ++
Sbjct: 543 QEIAALVEQLTPIERYAMKFLEASLEEVSREELKQAEEQVEAARKDLDQAKE 594
Score = 37 (18.1 bits), Expect = 1.9e-75, Sum P(2) = 1.9e-75
Identities = 9/20 (45%), Positives = 13/20 (65%)
Query: 1270 KEERALTFAAKEDDVDMLAD 1289
K E ++ A +DD+D LAD
Sbjct: 1320 KSEGSMVVAVIQDDLD-LAD 1338
>UNIPROTKB|O14646 [details] [associations]
symbol:CHD1 "Chromodomain-helicase-DNA-binding protein 1"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0035064 "methylated histone residue
binding" evidence=IDA] [GO:0004003 "ATP-dependent DNA helicase
activity" evidence=TAS] [GO:0006357 "regulation of transcription
from RNA polymerase II promoter" evidence=TAS] [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS00690
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0003677 GO:GO:0006357 GO:GO:0006351 GO:GO:0006338
GO:GO:0004003 GO:GO:0035064 InterPro:IPR016197 SUPFAM:SSF54160
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
HOVERGEN:HBG005325 InterPro:IPR025260 Pfam:PF13907 CTD:1105
KO:K11367 EMBL:AF006513 EMBL:AC022121 EMBL:BC117134 IPI:IPI00297851
IPI:IPI00954192 RefSeq:NP_001261.2 UniGene:Hs.643465 PDB:2B2T
PDB:2B2U PDB:2B2V PDB:2B2W PDB:2B2Y PDB:4B4C PDBsum:2B2T
PDBsum:2B2U PDBsum:2B2V PDBsum:2B2W PDBsum:2B2Y PDBsum:4B4C
ProteinModelPortal:O14646 SMR:O14646 IntAct:O14646 STRING:O14646
PhosphoSite:O14646 PaxDb:O14646 PRIDE:O14646
Ensembl:ENST00000284049 GeneID:1105 KEGG:hsa:1105 UCSC:uc003knf.3
GeneCards:GC05M098219 H-InvDB:HIX0005061 HGNC:HGNC:1915
HPA:HPA022236 MIM:602118 neXtProt:NX_O14646 PharmGKB:PA26451
HOGENOM:HOG000207917 InParanoid:O14646 OMA:AETHENE
OrthoDB:EOG4PG601 PhylomeDB:O14646 DrugBank:DB00445
EvolutionaryTrace:O14646 GenomeRNAi:1105 NextBio:4580
ArrayExpress:O14646 Bgee:O14646 CleanEx:HS_CHD1
Genevestigator:O14646 GermOnline:ENSG00000153922 Uniprot:O14646
Length = 1710
Score = 516 (186.7 bits), Expect = 2.8e-78, Sum P(4) = 2.8e-78
Identities = 111/292 (38%), Positives = 167/292 (57%)
Query: 455 LREYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTIAMLAHLACEKGIWGPHLIVVPTS 514
LR+YQ GL+WL + K + ILADEMGLGKTI TI+ L +L E ++GP L+VVP S
Sbjct: 481 LRDYQLNGLNWLAHSWCKGNSCILADEMGLGKTIQTISFLNYLFHEHQLYGPFLLVVPLS 540
Query: 515 VMLNWETEFLKWCPAFKILTYFGSAKERKFKR-QGWL----KPNSFHVCITTYRLIIQDS 569
+ +W+ E W + Y G R R W K F++ +TTY ++++D
Sbjct: 541 TLTSWQREIQTWASQMNAVVYLGDINSRNMIRTHEWTHHQTKRLKFNILLTTYEILLKDK 600
Query: 570 KVFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPLQNDLMELWSLMHFL 629
W ++ +DEAH +KN S ++TL++F S R+L+TGTPLQN L ELWSL+HF+
Sbjct: 601 AFLGGLNWAFIGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSLLHFI 660
Query: 630 MPHIFQSHQEFKDWFCNPISGMVEGQEKVNKEVVDRLHNVLRPFILRRLKRDVEKQLPMK 689
MP F S ++F++ G G ++KE L PF+LRR+K+DVEK LP K
Sbjct: 661 MPEKFSSWEDFEE---EHGKGREYGYASLHKE--------LEPFLLRRVKKDVEKSLPAK 709
Query: 690 QEHVIYCRLSKRQRNLYEDFIASSETQATLAS-ANFFGMISVIMQLRKVCNH 740
E ++ +S Q+ Y+ + + + S + G ++++M+L+K CNH
Sbjct: 710 VEQILRMEMSALQKQYYKWILTRNYKALSKGSKGSTSGFLNIMMELKKCCNH 761
Score = 391 (142.7 bits), Expect = 2.8e-78, Sum P(4) = 2.8e-78
Identities = 78/151 (51%), Positives = 108/151 (71%)
Query: 996 GKLQELAILLRKLKSDGHRALIFTQMTKMLDILEEFISLYGYTYMRLDGSTQPEERQTLM 1055
GKL L LL +L+ G+R LIF+QM +MLDIL E++ + + RLDGS + E R+ +
Sbjct: 788 GKLILLDKLLIRLRERGNRVLIFSQMVRMLDILAEYLKYRQFPFQRLDGSIKGELRKQAL 847
Query: 1056 QRFNTN-PKIFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQDRCHRIGQTREV 1114
FN + F F+LSTR+GG+GINL ADTV+ +DSDWNP D QAQ R HRIGQ ++V
Sbjct: 848 DHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQV 907
Query: 1115 HIYRLISESTIEENILKKANQKRALDDLVIQ 1145
+IYRL+++ ++EE+IL++A +K LD LVIQ
Sbjct: 908 NIYRLVTKGSVEEDILERAKKKMVLDHLVIQ 938
Score = 51 (23.0 bits), Expect = 2.8e-78, Sum P(4) = 2.8e-78
Identities = 18/72 (25%), Positives = 30/72 (41%)
Query: 198 ESSAEMGEDEAEPTVVEEGHVQGNGNDLLAGSKLDTSGSLVRRCDEINGGLSISENHLLD 257
E S E+ + + G G+G+ +GS D S S D +G S S++ +
Sbjct: 7 EESVRNSSGESSQSDDDSGSASGSGSGSSSGSSSDGSSSQSGSSDSDSGSESGSQSES-E 65
Query: 258 IETSQVRDTSKK 269
+TS+ K
Sbjct: 66 SDTSRENKVQAK 77
Score = 49 (22.3 bits), Expect = 3.1e-78, Sum P(5) = 3.1e-78
Identities = 12/55 (21%), Positives = 28/55 (50%)
Query: 1563 MPVKRVLMIKPEKLKKGNVWSRDCVPSPDV-WLPQEDAILCAVVHEYG-PNWSLV 1615
+P+ + + PE+ K+ + D+ W ++D+ L ++EYG +W ++
Sbjct: 1222 IPLHKSIPSDPEERKQYTIPCHTKAAHFDIDWGKEDDSNLLIGIYEYGYGSWEMI 1276
Score = 49 (22.3 bits), Expect = 5.0e-78, Sum P(5) = 5.0e-78
Identities = 10/37 (27%), Positives = 22/37 (59%)
Query: 87 QQSPMREQPGIQYKEADENGAEEPGVQSKEADEDDAE 123
QQ ++Q Q++ + +G+EE S+++D+ +E
Sbjct: 105 QQQQQQQQ---QHQASSNSGSEEDSSSSEDSDDSSSE 138
Score = 41 (19.5 bits), Expect = 3.4e-77, Sum P(5) = 3.4e-77
Identities = 11/40 (27%), Positives = 19/40 (47%)
Query: 98 QYKEADENGAEEPGVQSK-EADEDDAEQHSGFEPQLDAAD 136
Q +D + E G QS+ E+D + P++D A+
Sbjct: 46 QSGSSDSDSGSESGSQSESESDTSRENKVQAKPPKVDGAE 85
Score = 40 (19.1 bits), Expect = 2.8e-78, Sum P(4) = 2.8e-78
Identities = 8/21 (38%), Positives = 11/21 (52%)
Query: 1515 RSPDSDSKLSRKRHDGSTELK 1535
+S + D KLS + DG K
Sbjct: 1362 KSDEDDDKLSESKSDGRERSK 1382
Score = 39 (18.8 bits), Expect = 3.1e-78, Sum P(5) = 3.1e-78
Identities = 12/47 (25%), Positives = 23/47 (48%)
Query: 1743 KSTREPARRVKFTNLGQSSKLLSAALHDANSRQQDDKVSNFDRREDG 1789
K+ + + +K + + K S+ L S + DDK+S + + DG
Sbjct: 1333 KARAKKNKAMKSIKVKEEIKSDSSPLPSEKSDEDDDKLS--ESKSDG 1377
>UNIPROTKB|I3L6N4 [details] [associations]
symbol:CHD1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
InterPro:IPR025260 Pfam:PF13907 GeneTree:ENSGT00560000076896
EMBL:CU570924 EMBL:CU928692 Ensembl:ENSSSCT00000022643
Uniprot:I3L6N4
Length = 1798
Score = 526 (190.2 bits), Expect = 4.1e-78, Sum P(5) = 4.1e-78
Identities = 111/292 (38%), Positives = 169/292 (57%)
Query: 455 LREYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTIAMLAHLACEKGIWGPHLIVVPTS 514
LR+YQ GL+WL + K + ILADEMGLGKTI TI+ L +L E ++GP L+VVP S
Sbjct: 475 LRDYQLNGLNWLAHSWCKGNSCILADEMGLGKTIQTISFLNYLFHEHQLYGPFLLVVPLS 534
Query: 515 VMLNWETEFLKWCPAFKILTYFGSAKERKFKR-QGWLKPNS----FHVCITTYRLIIQDS 569
+ +W+ E W + Y G R R W+ P + F++ +TTY ++++D
Sbjct: 535 TLTSWQREIQTWASQMNAVVYLGDINSRNMIRTHEWMHPQTKRLKFNILLTTYEILLKDK 594
Query: 570 KVFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPLQNDLMELWSLMHFL 629
W ++ +DEAH +KN S ++TL++F S R+L+TGTPLQN L ELWSL+HF+
Sbjct: 595 AFLGGLNWAFIGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSLLHFI 654
Query: 630 MPHIFQSHQEFKDWFCNPISGMVEGQEKVNKEVVDRLHNVLRPFILRRLKRDVEKQLPMK 689
MP F S ++F++ G G ++KE L PF+LRR+K+DVEK LP K
Sbjct: 655 MPEKFSSWEDFEE---EHGKGREYGYASLHKE--------LEPFLLRRVKKDVEKSLPAK 703
Query: 690 QEHVIYCRLSKRQRNLYEDFIASSETQATLAS-ANFFGMISVIMQLRKVCNH 740
E ++ +S Q+ Y+ + + + S + G ++++M+L+K CNH
Sbjct: 704 VEQILRMEMSALQKQYYKWILTRNYKALSKGSKGSTSGFLNIMMELKKCCNH 755
Score = 375 (137.1 bits), Expect = 4.1e-78, Sum P(5) = 4.1e-78
Identities = 76/151 (50%), Positives = 105/151 (69%)
Query: 996 GKLQELAILLRKLKSDGHRALIFTQMTKMLDILEEFISLYGYTYMRLDGSTQPEERQTLM 1055
GKL L LL +L+ G+R LIF+QM +MLDIL E++ + + RLDGS + E R+ +
Sbjct: 782 GKLILLDKLLIRLRERGNRVLIFSQMVRMLDILAEYLKYRQFPFQRLDGSIKGELRKQAL 841
Query: 1056 QRFNTN-PKIFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQDRCHRIGQTREV 1114
FN + F F+LSTR+GG+GINL ADTV+ +DSDWNP D QAQ R HR G +V
Sbjct: 842 DHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRHGYLSQV 901
Query: 1115 HIYRLISESTIEENILKKANQKRALDDLVIQ 1145
+IYRL+++ ++EE+IL++A +K LD LVIQ
Sbjct: 902 NIYRLVTKGSVEEDILERAKKKMVLDHLVIQ 932
Score = 56 (24.8 bits), Expect = 4.1e-78, Sum P(5) = 4.1e-78
Identities = 12/39 (30%), Positives = 25/39 (64%)
Query: 86 VQQSPM-REQPGIQYKEADENGAEEPGVQSKEADEDDAE 123
VQ+S M ++Q Q++ + +G+EE S+++D+ +E
Sbjct: 96 VQRSAMLKKQQQQQHQASSNSGSEEDSSSSEDSDDSSSE 134
Score = 49 (22.3 bits), Expect = 4.1e-78, Sum P(5) = 4.1e-78
Identities = 12/55 (21%), Positives = 28/55 (50%)
Query: 1563 MPVKRVLMIKPEKLKKGNVWSRDCVPSPDV-WLPQEDAILCAVVHEYG-PNWSLV 1615
+P+ + + PE+ K+ + D+ W ++D+ L ++EYG +W ++
Sbjct: 1216 IPLHKSIPSDPEERKQYTIPCHTKAAHFDIDWGKEDDSNLLIGIYEYGYGSWEMI 1270
Score = 49 (22.3 bits), Expect = 2.2e-77, Sum P(5) = 2.2e-77
Identities = 15/56 (26%), Positives = 24/56 (42%)
Query: 198 ESSAEMGEDEAEPTVVEEGHVQGNGNDLLAGSKLDTSGSLVRRCDEINGGLSISEN 253
E S E+ + + G G+G+ +GS D S S D +G S S++
Sbjct: 7 EESVRNSSGESSQSDDDSGSASGSGSGSSSGSSSDGSSSQSGSSDSDSGSESGSQS 62
Score = 42 (19.8 bits), Expect = 1.2e-76, Sum P(5) = 1.2e-76
Identities = 11/40 (27%), Positives = 19/40 (47%)
Query: 98 QYKEADENGAEEPGVQSK-EADEDDAEQHSGFEPQLDAAD 136
Q +D + E G QS+ E+D + P++D A+
Sbjct: 46 QSGSSDSDSGSESGSQSESESDNSRENKVQAKPPKVDGAE 85
Score = 40 (19.1 bits), Expect = 4.1e-78, Sum P(5) = 4.1e-78
Identities = 11/42 (26%), Positives = 19/42 (45%)
Query: 1743 KSTREPARRVKFTNLGQSSKLLSAALHDANSRQQDDKVSNFD 1784
K+ + + +K + + K S+ L S + DDK N D
Sbjct: 1329 KARAKKNKAMKSIKVKEEIKSDSSPLPSEKSDEDDDKKENMD 1370
Score = 38 (18.4 bits), Expect = 5.0e-43, Sum P(4) = 5.0e-43
Identities = 12/31 (38%), Positives = 14/31 (45%)
Query: 1580 NVWSRDCVPSPDV-WLPQEDAILCAVVHEYG 1609
N+ S D V D W PQ D A H +G
Sbjct: 866 NLASADTVVIFDSDWNPQNDLQAQARAHRHG 896
Score = 37 (18.1 bits), Expect = 9.3e-78, Sum P(4) = 9.3e-78
Identities = 14/54 (25%), Positives = 24/54 (44%)
Query: 1444 ESKAVKEEPSVEPMSIDDDFYDEDATFSDAMSPPSTSQKKRKKAELALYDDEER 1497
+S VKEE + + + DED + M ++ + KK + D EE+
Sbjct: 1339 KSIKVKEEIKSDSSPLPSEKSDEDDDKKENMDEITSVKHPNKKIKTE-GDSEEK 1391
>UNIPROTKB|I3LIS2 [details] [associations]
symbol:CHD1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0035064 "methylated histone residue binding"
evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0003677
GO:GO:0006338 GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
InterPro:IPR023779 PROSITE:PS00598 InterPro:IPR025260 Pfam:PF13907
GeneTree:ENSGT00560000076896 OMA:AETHENE EMBL:CU570924
EMBL:CU928692 Ensembl:ENSSSCT00000032432 Uniprot:I3LIS2
Length = 1799
Score = 526 (190.2 bits), Expect = 4.1e-78, Sum P(5) = 4.1e-78
Identities = 111/292 (38%), Positives = 169/292 (57%)
Query: 455 LREYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTIAMLAHLACEKGIWGPHLIVVPTS 514
LR+YQ GL+WL + K + ILADEMGLGKTI TI+ L +L E ++GP L+VVP S
Sbjct: 476 LRDYQLNGLNWLAHSWCKGNSCILADEMGLGKTIQTISFLNYLFHEHQLYGPFLLVVPLS 535
Query: 515 VMLNWETEFLKWCPAFKILTYFGSAKERKFKR-QGWLKPNS----FHVCITTYRLIIQDS 569
+ +W+ E W + Y G R R W+ P + F++ +TTY ++++D
Sbjct: 536 TLTSWQREIQTWASQMNAVVYLGDINSRNMIRTHEWMHPQTKRLKFNILLTTYEILLKDK 595
Query: 570 KVFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPLQNDLMELWSLMHFL 629
W ++ +DEAH +KN S ++TL++F S R+L+TGTPLQN L ELWSL+HF+
Sbjct: 596 AFLGGLNWAFIGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSLLHFI 655
Query: 630 MPHIFQSHQEFKDWFCNPISGMVEGQEKVNKEVVDRLHNVLRPFILRRLKRDVEKQLPMK 689
MP F S ++F++ G G ++KE L PF+LRR+K+DVEK LP K
Sbjct: 656 MPEKFSSWEDFEE---EHGKGREYGYASLHKE--------LEPFLLRRVKKDVEKSLPAK 704
Query: 690 QEHVIYCRLSKRQRNLYEDFIASSETQATLAS-ANFFGMISVIMQLRKVCNH 740
E ++ +S Q+ Y+ + + + S + G ++++M+L+K CNH
Sbjct: 705 VEQILRMEMSALQKQYYKWILTRNYKALSKGSKGSTSGFLNIMMELKKCCNH 756
Score = 375 (137.1 bits), Expect = 4.1e-78, Sum P(5) = 4.1e-78
Identities = 76/151 (50%), Positives = 105/151 (69%)
Query: 996 GKLQELAILLRKLKSDGHRALIFTQMTKMLDILEEFISLYGYTYMRLDGSTQPEERQTLM 1055
GKL L LL +L+ G+R LIF+QM +MLDIL E++ + + RLDGS + E R+ +
Sbjct: 783 GKLILLDKLLIRLRERGNRVLIFSQMVRMLDILAEYLKYRQFPFQRLDGSIKGELRKQAL 842
Query: 1056 QRFNTN-PKIFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQDRCHRIGQTREV 1114
FN + F F+LSTR+GG+GINL ADTV+ +DSDWNP D QAQ R HR G +V
Sbjct: 843 DHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRHGYLSQV 902
Query: 1115 HIYRLISESTIEENILKKANQKRALDDLVIQ 1145
+IYRL+++ ++EE+IL++A +K LD LVIQ
Sbjct: 903 NIYRLVTKGSVEEDILERAKKKMVLDHLVIQ 933
Score = 56 (24.8 bits), Expect = 4.1e-78, Sum P(5) = 4.1e-78
Identities = 12/39 (30%), Positives = 25/39 (64%)
Query: 86 VQQSPM-REQPGIQYKEADENGAEEPGVQSKEADEDDAE 123
VQ+S M ++Q Q++ + +G+EE S+++D+ +E
Sbjct: 97 VQRSAMLKKQQQQQHQASSNSGSEEDSSSSEDSDDSSSE 135
Score = 49 (22.3 bits), Expect = 4.1e-78, Sum P(5) = 4.1e-78
Identities = 12/55 (21%), Positives = 28/55 (50%)
Query: 1563 MPVKRVLMIKPEKLKKGNVWSRDCVPSPDV-WLPQEDAILCAVVHEYG-PNWSLV 1615
+P+ + + PE+ K+ + D+ W ++D+ L ++EYG +W ++
Sbjct: 1217 IPLHKSIPSDPEERKQYTIPCHTKAAHFDIDWGKEDDSNLLIGIYEYGYGSWEMI 1271
Score = 43 (20.2 bits), Expect = 9.2e-77, Sum P(5) = 9.2e-77
Identities = 12/40 (30%), Positives = 19/40 (47%)
Query: 214 EEGHVQGNGNDLLAGSKLDTSGSLVRRCDEINGGLSISEN 253
+ G G+G+ +GS D S S D +G S S++
Sbjct: 24 DSGSASGSGSGSSSGSSSDGSSSQSGSSDSDSGSESGSQS 63
Score = 42 (19.8 bits), Expect = 1.2e-76, Sum P(5) = 1.2e-76
Identities = 11/40 (27%), Positives = 19/40 (47%)
Query: 98 QYKEADENGAEEPGVQSK-EADEDDAEQHSGFEPQLDAAD 136
Q +D + E G QS+ E+D + P++D A+
Sbjct: 47 QSGSSDSDSGSESGSQSESESDNSRENKVQAKPPKVDGAE 86
Score = 40 (19.1 bits), Expect = 4.1e-78, Sum P(5) = 4.1e-78
Identities = 11/42 (26%), Positives = 19/42 (45%)
Query: 1743 KSTREPARRVKFTNLGQSSKLLSAALHDANSRQQDDKVSNFD 1784
K+ + + +K + + K S+ L S + DDK N D
Sbjct: 1330 KARAKKNKAMKSIKVKEEIKSDSSPLPSEKSDEDDDKKENMD 1371
Score = 38 (18.4 bits), Expect = 5.0e-43, Sum P(4) = 5.0e-43
Identities = 12/31 (38%), Positives = 14/31 (45%)
Query: 1580 NVWSRDCVPSPDV-WLPQEDAILCAVVHEYG 1609
N+ S D V D W PQ D A H +G
Sbjct: 867 NLASADTVVIFDSDWNPQNDLQAQARAHRHG 897
Score = 37 (18.1 bits), Expect = 9.3e-78, Sum P(4) = 9.3e-78
Identities = 14/54 (25%), Positives = 24/54 (44%)
Query: 1444 ESKAVKEEPSVEPMSIDDDFYDEDATFSDAMSPPSTSQKKRKKAELALYDDEER 1497
+S VKEE + + + DED + M ++ + KK + D EE+
Sbjct: 1340 KSIKVKEEIKSDSSPLPSEKSDEDDDKKENMDEITSVKHPNKKIKTE-GDSEEK 1392
>UNIPROTKB|H0YMN5 [details] [associations]
symbol:INO80 "DNA helicase INO80" species:9606 "Homo
sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0016817 "hydrolase activity, acting on
acid anhydrides" evidence=IEA] InterPro:IPR000330
InterPro:IPR020838 Pfam:PF00176 Pfam:PF13892 PROSITE:PS51413
GO:GO:0005524 GO:GO:0003677 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 EMBL:AC020661 GO:GO:0016817 ChiTaRS:INO80
HGNC:HGNC:26956 EMBL:AC021753 ProteinModelPortal:H0YMN5 SMR:H0YMN5
Ensembl:ENST00000558357 Bgee:H0YMN5 Uniprot:H0YMN5
Length = 1104
Score = 779 (279.3 bits), Expect = 5.6e-78, Sum P(2) = 5.6e-78
Identities = 146/324 (45%), Positives = 213/324 (65%)
Query: 448 PFLLKFPLREYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTIAMLAHLACEKGIWGPH 507
P + L+ YQ G++WL +YE+ +NGILADEMGLGKT+ +IA+LAHLA + IWGP
Sbjct: 511 PTIFNGKLKGYQLKGMNWLANLYEQGINGILADEMGLGKTVQSIALLAHLAERENIWGPF 570
Query: 508 LIVVPTSVMLNWETEFLKWCPAFKILTYFGSAKERKFKRQGWLKPN------SFHVCITT 561
LI+ P S + NW EF ++ P FK+L Y+G+ +RK R+ W + FHV IT+
Sbjct: 571 LIISPASTLNNWHQEFTRFVPKFKVLPYWGNPHDRKVIRRFWSQKTLYTQDAPFHVVITS 630
Query: 562 YRLIIQDSKVFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPLQNDLME 621
Y+L++QD K F+R KW+Y++LDEA +K+ S RW+ LL F + R+LLTGTP+QN + E
Sbjct: 631 YQLVVQDVKYFQRVKWQYMVLDEAQALKSSSSVRWKILLQFQCRNRLLLTGTPIQNTMAE 690
Query: 622 LWSLMHFLMPHIFQSHQEFKDWFCNPISGMVEGQEKVNKEVVDRLHNVLRPFILRRLKRD 681
LW+L+HF+MP +F SH+EF +WF I E + +++ + RLH +L+PF+LRR+K+D
Sbjct: 691 LWALLHFIMPTLFDSHEEFNEWFSKDIESHAENKSAIDENQLSRLHMILKPFMLRRIKKD 750
Query: 682 VEKQLPMKQEHVIYCRLSKRQRNLY---------EDFIASSETQATLASANFFGMISVIM 732
VE +L K E ++YC+L+ RQ+ LY ED + SS A +++++M
Sbjct: 751 VENELSDKIEILMYCQLTSRQKLLYQALKNKISIEDLLQSSMGSTQQAQNTTSSLMNLVM 810
Query: 733 QLRKVCNHPDLFEGRPIVSSFDMS 756
Q RKVCNHP+LFE + S F +S
Sbjct: 811 QFRKVCNHPELFERQETWSPFHIS 834
Score = 81 (33.6 bits), Expect = 5.6e-78, Sum P(2) = 5.6e-78
Identities = 19/91 (20%), Positives = 45/91 (49%)
Query: 31 KKFWMKIEKLVLYKHQMEVDVRKKKALDKQLEFLLGQTERYSSMLAENLVDSHKPVQQSP 90
K+ + EK L + +++ ++R+ K ++L FL+ QTE Y+ ++ H +Q+
Sbjct: 355 KEHRKRAEKEALEQRKLDEEMREAKRQQRKLNFLITQTELYAHFMSRKRDMGHDGIQEEI 414
Query: 91 MRE-QPGIQYKEADENGAEEPGVQSKEADED 120
+R+ + ++ D G + ++ D +
Sbjct: 415 LRKLEDSSTQRQIDIGGGVVVNITQEDYDSN 445
>UNIPROTKB|F1SDB8 [details] [associations]
symbol:CHD1L "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0006974 "response to DNA damage stimulus" evidence=IEA]
[GO:0006338 "chromatin remodeling" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR002464
Pfam:PF00176 Pfam:PF00271 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 GO:GO:0005886 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0003677 GO:GO:0006974 GO:GO:0006338
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR002589
PROSITE:PS51154 GO:GO:0008026 OMA:TCQTIAL
GeneTree:ENSGT00670000098110 EMBL:CU462855
Ensembl:ENSSSCT00000007340 Uniprot:F1SDB8
Length = 905
Score = 485 (175.8 bits), Expect = 5.7e-78, Sum P(2) = 5.7e-78
Identities = 113/297 (38%), Positives = 167/297 (56%)
Query: 455 LREYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTIAMLAHLACEKGIWGPHLIVVPTS 514
LR YQ G++WL + + IL DEMGLGKT TIA+ +LA GP LI+ P S
Sbjct: 48 LRPYQLEGVNWLAQCFHYQNGCILGDEMGLGKTCQTIAVFIYLAGRLNDEGPFLILCPLS 107
Query: 515 VMLNWETEFLKWCPAFKILTYFGSAKERKFKRQGWLKPNSFHVCITTYRLIIQDSKVFKR 574
V+ NW+ E + P +TY G +ER +Q + + FHV +TTY + ++D+ K
Sbjct: 108 VLSNWKEEMERCAPGLCCVTYAGDKEERAHLQQDLKQESGFHVLLTTYEICLKDASFLKS 167
Query: 575 KKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPLQNDLMELWSLMHFLMPHIF 634
W L++DEAH +KN S ++L F+ R+LLTGTP+QN L EL+SL+ F+ P +F
Sbjct: 168 FPWSVLVVDEAHRLKNQNSLLHKSLSEFSVAFRLLLTGTPIQNSLQELYSLLSFVEPDLF 227
Query: 635 QSHQEFKDWFCNPISGMVEGQEKVNKEV--VDRLHNVLRPFILRRLKRDVEKQLPMKQEH 692
S +E +D+ V+ E + KE L+ +L+PF+LRR+K +V +LP K E
Sbjct: 228 -SKEEVEDF--------VQRYEDIEKESESASELYKLLQPFLLRRVKAEVAAELPKKTEV 278
Query: 693 VIYCRLSKRQRNLYEDFIASS-ETQATLAS--ANFFGMISVIMQLRKVCNHPDLFEG 746
VIY +S Q+ Y+ + E + A + +V+ QLRK +HP LF+G
Sbjct: 279 VIYHGMSALQKKYYKAILMKDLEISDAFENEMAKKVKLQNVLSQLRKCVDHPYLFDG 335
Score = 392 (143.0 bits), Expect = 5.7e-78, Sum P(2) = 5.7e-78
Identities = 80/154 (51%), Positives = 105/154 (68%)
Query: 996 GKLQELAILLRKLKSDGHRALIFTQMTKMLDILEEFISLYGYTYMRLDGSTQPEERQTLM 1055
GKL L LL L S GHR L+F+QMT+MLDIL++++ GY+Y R+DGS + EER +
Sbjct: 352 GKLHLLDKLLAFLYSKGHRVLLFSQMTQMLDILQDYMDYRGYSYERVDGSVRGEERHLAI 411
Query: 1056 QRFNTNPKIFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQDRCHRIGQTREVH 1115
+ F P IF+F+LSTR+GGVG+NL ADTVIF DSD+NP D QA R HRIGQ + V
Sbjct: 412 KNFGQQP-IFIFLLSTRAGGVGMNLTAADTVIFVDSDFNPQNDLQAAARAHRIGQNKSVK 470
Query: 1116 IYRLISESTIEENILKKANQKRALDDLVIQSGGY 1149
+ RLI T+EE I +KA K L + +I+ G +
Sbjct: 471 VIRLIGRDTVEEIICRKAASKLKLTNTIIEGGRF 504
Score = 42 (19.8 bits), Expect = 6.3e-31, Sum P(2) = 6.3e-31
Identities = 9/27 (33%), Positives = 16/27 (59%)
Query: 109 EPGVQSKEADEDDAEQHSGFEPQLDAA 135
EP + SKE ED +++ E + ++A
Sbjct: 223 EPDLFSKEEVEDFVQRYEDIEKESESA 249
>UNIPROTKB|Q86WJ1 [details] [associations]
symbol:CHD1L "Chromodomain-helicase-DNA-binding protein
1-like" species:9606 "Homo sapiens" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IDA] [GO:0016887 "ATPase activity"
evidence=IMP] [GO:0004003 "ATP-dependent DNA helicase activity"
evidence=TAS] [GO:0006338 "chromatin remodeling" evidence=IDA]
[GO:0006281 "DNA repair" evidence=TAS] [GO:0006974 "response to DNA
damage stimulus" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0006200 "ATP
catabolic process" evidence=IMP] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005886
"plasma membrane" evidence=IDA] InterPro:IPR000330
InterPro:IPR001650 InterPro:IPR002464 Pfam:PF00176 Pfam:PF00271
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 GO:GO:0005886
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0000166
GO:GO:0003677 GO:GO:0006281 EMBL:AL356378 GO:GO:0006338
GO:GO:0004003 HSSP:Q97XQ5 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR002589 PROSITE:PS51154
CTD:9557 HOVERGEN:HBG077542 OrthoDB:EOG4SXNBV EMBL:AF537213
EMBL:AK001342 EMBL:AK027631 EMBL:EF560738 EMBL:BC001171
EMBL:BC005038 EMBL:BC008649 EMBL:BC043501 EMBL:BC077717
EMBL:AK223496 IPI:IPI00329088 IPI:IPI00854584 IPI:IPI00890729
IPI:IPI00890749 RefSeq:NP_001243265.1 RefSeq:NP_001243266.1
RefSeq:NP_001243267.1 RefSeq:NP_004275.4 RefSeq:NP_078844.2
RefSeq:XP_003960255.1 RefSeq:XP_003960264.1 UniGene:Hs.191164
ProteinModelPortal:Q86WJ1 SMR:Q86WJ1 DIP:DIP-48933N IntAct:Q86WJ1
STRING:Q86WJ1 PhosphoSite:Q86WJ1 DMDM:311033359 PaxDb:Q86WJ1
PRIDE:Q86WJ1 Ensembl:ENST00000369258 Ensembl:ENST00000369259
Ensembl:ENST00000431239 Ensembl:ENST00000579763
Ensembl:ENST00000583055 GeneID:101060601 GeneID:9557
KEGG:hsa:101060601 KEGG:hsa:9557 UCSC:uc001epm.4 UCSC:uc001epo.4
UCSC:uc009wjh.3 GeneCards:GC01P146717 H-InvDB:HIX0000988
H-InvDB:HIX0028745 HGNC:HGNC:1916 HPA:HPA027789 HPA:HPA028670
MIM:613039 neXtProt:NX_Q86WJ1 PharmGKB:PA26452 InParanoid:Q86WJ1
OMA:TCQTIAL PhylomeDB:Q86WJ1 ChiTaRS:CHD1L GenomeRNAi:9557
NextBio:35849 ArrayExpress:Q86WJ1 Bgee:Q86WJ1 CleanEx:HS_CHD1L
Genevestigator:Q86WJ1 Uniprot:Q86WJ1
Length = 897
Score = 494 (179.0 bits), Expect = 6.6e-78, Sum P(3) = 6.6e-78
Identities = 111/292 (38%), Positives = 163/292 (55%)
Query: 455 LREYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTIAMLAHLACEKGIWGPHLIVVPTS 514
LR YQ G++WL + + IL DEMGLGKT TIA+ +LA GP LI+ P S
Sbjct: 46 LRSYQLEGVNWLAQRFHCQNGCILGDEMGLGKTCQTIALFIYLAGRLNDEGPFLILCPLS 105
Query: 515 VMLNWETEFLKWCPAFKILTYFGSAKERKFKRQGWLKPNSFHVCITTYRLIIQDSKVFKR 574
V+ NW+ E ++ P +TY G +ER +Q + + FHV +TTY + ++D+ K
Sbjct: 106 VLSNWKEEMQRFAPGLSCVTYAGDKEERACLQQDLKQESRFHVLLTTYEICLKDASFLKS 165
Query: 575 KKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPLQNDLMELWSLMHFLMPHIF 634
W L++DEAH +KN S +TL F+ +LLTGTP+QN L EL+SL+ F+ P +F
Sbjct: 166 FPWSVLVVDEAHRLKNQSSLLHKTLSEFSVVFSLLLTGTPIQNSLQELYSLLSFVEPDLF 225
Query: 635 QSHQEFKDWFCNPISGMVEGQEKVNKEVVDRLHNVLRPFILRRLKRDVEKQLPMKQEHVI 694
S +E D+ + EK E LH +L+PF+LRR+K +V +LP K E VI
Sbjct: 226 -SKEEVGDFIQR-----YQDIEK-ESESASELHKLLQPFLLRRVKAEVATELPKKTEVVI 278
Query: 695 YCRLSKRQRNLYEDFIASSETQATLASANFFGMISVIMQLRKVCNHPDLFEG 746
Y +S Q+ Y+ + +A + +++ QLRK +HP LF+G
Sbjct: 279 YHGMSALQKKYYKAILMKDLDAFENETAKKVKLQNILSQLRKCVDHPYLFDG 330
Score = 393 (143.4 bits), Expect = 6.6e-78, Sum P(3) = 6.6e-78
Identities = 79/154 (51%), Positives = 106/154 (68%)
Query: 996 GKLQELAILLRKLKSDGHRALIFTQMTKMLDILEEFISLYGYTYMRLDGSTQPEERQTLM 1055
GKL L LL L S GHR L+F+QMT+MLDIL++++ GY+Y R+DGS + EER +
Sbjct: 347 GKLHLLDKLLAFLYSGGHRVLLFSQMTQMLDILQDYMDYRGYSYERVDGSVRGEERHLAI 406
Query: 1056 QRFNTNPKIFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQDRCHRIGQTREVH 1115
+ F P IF+F+LSTR+GGVG+NL ADTVIF DSD+NP D QA R HRIGQ + V
Sbjct: 407 KNFGQQP-IFVFLLSTRAGGVGMNLTAADTVIFVDSDFNPQNDLQAAARAHRIGQNKSVK 465
Query: 1116 IYRLISESTIEENILKKANQKRALDDLVIQSGGY 1149
+ RLI T+EE + +KA K L +++I+ G +
Sbjct: 466 VIRLIGRDTVEEIVYRKAASKLQLTNMIIEGGHF 499
Score = 38 (18.4 bits), Expect = 6.6e-78, Sum P(3) = 6.6e-78
Identities = 10/29 (34%), Positives = 15/29 (51%)
Query: 1441 LTSESKAVKEEPSVEPMSIDDDFYDEDAT 1469
L SE ++ + E S + D+ D DAT
Sbjct: 687 LPSEESEPEDLENGEESSAELDYQDPDAT 715
>UNIPROTKB|F1Q2U2 [details] [associations]
symbol:CHD1L "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR002464 Pfam:PF00176 Pfam:PF00271 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003677
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR002589
PROSITE:PS51154 GO:GO:0008026 OMA:TCQTIAL
GeneTree:ENSGT00670000098110 EMBL:AAEX03011032
Ensembl:ENSCAFT00000017488 Uniprot:F1Q2U2
Length = 898
Score = 495 (179.3 bits), Expect = 9.8e-78, Sum P(2) = 9.8e-78
Identities = 111/297 (37%), Positives = 161/297 (54%)
Query: 455 LREYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTIAMLAHLACEKGIWGPHLIVVPTS 514
LR YQ G++WL + + IL DEMGLGKT TIA+ +LA GP LI+ P S
Sbjct: 48 LRSYQLEGVNWLARCFHCQNGCILGDEMGLGKTCQTIALFIYLAGRLNDEGPFLILCPLS 107
Query: 515 VMLNWETEFLKWCPAFKILTYFGSAKERKFKRQGWLKPNSFHVCITTYRLIIQDSKVFKR 574
V+ NW E ++ P + Y G +ER +Q + + FHV +TTY + ++DS K
Sbjct: 108 VLSNWTEEMERFAPGLSCVMYAGDKEERARLQQDLKQESRFHVLLTTYEICLKDSSFLKS 167
Query: 575 KKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPLQNDLMELWSLMHFLMPHIF 634
W L++DEAH +KN S +TLL F+ +LLTGTP+QN L EL+SL+ F+ P +F
Sbjct: 168 FPWSVLVVDEAHRLKNQNSLLHKTLLEFSVVFSLLLTGTPIQNSLQELYSLLSFVEPDLF 227
Query: 635 QSHQEFKDWFCNPISGMVEGQEKVNKEV--VDRLHNVLRPFILRRLKRDVEKQLPMKQEH 692
Q + V+ + + KE LH +L+PF+LRR+K +V +LP K E
Sbjct: 228 PKEQ---------VGDFVQRYQDIEKESDSASELHKLLQPFLLRRVKAEVATELPKKTEV 278
Query: 693 VIYCRLSKRQRNLYEDFIASSETQATLASANFFGMISVIMQLRKVCNHPDLFEGRPI 749
V+Y +S Q+ Y+ + A + +V+ QLRK +HP LFEG +
Sbjct: 279 VLYHGMSALQKKYYKAILMKDLDAFESEMAKKVKLQNVLSQLRKCVDHPYLFEGETV 335
Score = 379 (138.5 bits), Expect = 9.8e-78, Sum P(2) = 9.8e-78
Identities = 106/301 (35%), Positives = 160/301 (53%)
Query: 1000 ELAILLRKLKSDGHRALIFTQMTKMLDILEEFISLYGYTYMRLDGSTQPEERQTLMQRFN 1059
ELA L + GHR L+F+QMT+MLDIL++++ GY+Y R+DGS + EER ++ F
Sbjct: 352 ELAALSFLFLARGHRVLLFSQMTQMLDILQDYMDYRGYSYERVDGSVRGEERHLAIKNFG 411
Query: 1060 TNPKIFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQDRCHRIGQTREVHIYRL 1119
P +F+F+LSTR+GGVG+NL ADTVIF DSD+NP D QA R HRIGQ + V + RL
Sbjct: 412 QQP-VFVFLLSTRAGGVGMNLTAADTVIFVDSDFNPQNDLQAAARAHRIGQNKSVKVIRL 470
Query: 1120 ISESTIEENILKKANQKRALDDLVIQSGGYNTEFFKKLDPMEL-------FSGHRTLPMK 1172
I T+EE + +KA K L + +I+ G + K +L F + L +
Sbjct: 471 IGRDTVEEIVYRKAASKLQLTNAIIEGGHFTLGAQKPAADADLQLSEILKFGLDKLLSSQ 530
Query: 1173 --TMQK---EKAIN---NGNEVSLSNADVEAALKCVEDEADYMALKRAEQEEAVDNQEFT 1224
TM + E+ + NG +S + A E ++ E+ ++M L + ++E
Sbjct: 531 GSTMDEIDLERILGETKNGQWISDALATTEGGVREQEEGKNHMYLFEGKDYSKEPSKE-- 588
Query: 1225 EEAVGRPEDDELV-IEDTVRTDEPTDQGGCMTANNDNGMM--LTGNDPKEERALTFAAKE 1281
R ++LV ++ T E T Q G + N N ++ L+ K +R L+ E
Sbjct: 589 ----DRESFEQLVNLQKTFL--EKTTQEGRLLRNKGNVLLPGLSEESTKRKRILSPEELE 642
Query: 1282 D 1282
D
Sbjct: 643 D 643
Score = 43 (20.2 bits), Expect = 2.3e-42, Sum P(2) = 2.3e-42
Identities = 17/76 (22%), Positives = 30/76 (39%)
Query: 1161 ELFSGHRTLPMKTMQKEKAINNGNEVSLSNADVEAAL-KCVEDEADYMALKRAEQEEAVD 1219
+L + +T KT Q+ + + N V L E+ K + + ++ QE A
Sbjct: 595 QLVNLQKTFLEKTTQEGRLLRNKGNVLLPGLSEESTKRKRILSPEELEDRRKKRQEAAAK 654
Query: 1220 NQEFTEEAVGRPEDDE 1235
+ EE + E E
Sbjct: 655 RKRLMEEKKRKKEKVE 670
Score = 37 (18.1 bits), Expect = 5.3e-29, Sum P(2) = 5.3e-29
Identities = 10/23 (43%), Positives = 13/23 (56%)
Query: 212 VVEEGHVQGNGNDLLAGSKLDTS 234
VV+E H N N LL + L+ S
Sbjct: 174 VVDEAHRLKNQNSLLHKTLLEFS 196
>UNIPROTKB|Q3B7N1 [details] [associations]
symbol:CHD1L "Chromodomain-helicase-DNA-binding protein
1-like" species:9913 "Bos taurus" [GO:0006200 "ATP catabolic
process" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0006974 "response to DNA damage stimulus" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0006338 "chromatin
remodeling" evidence=ISS] [GO:0000166 "nucleotide binding"
evidence=ISS] [GO:0006281 "DNA repair" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR002464
Pfam:PF00176 Pfam:PF00271 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005634 GO:GO:0000166
GO:GO:0003677 GO:GO:0006281 GO:GO:0006974 GO:GO:0016887
GO:GO:0006338 HSSP:Q97XQ5 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR002589 PROSITE:PS51154
GO:GO:0008026 EMBL:BC107534 IPI:IPI00710168 RefSeq:NP_001032909.1
UniGene:Bt.18335 ProteinModelPortal:Q3B7N1 PRIDE:Q3B7N1
GeneID:524787 KEGG:bta:524787 CTD:9557 HOGENOM:HOG000030789
HOVERGEN:HBG077542 InParanoid:Q3B7N1 OrthoDB:EOG4SXNBV
NextBio:20874039 Uniprot:Q3B7N1
Length = 897
Score = 481 (174.4 bits), Expect = 1.2e-77, Sum P(2) = 1.2e-77
Identities = 108/294 (36%), Positives = 161/294 (54%)
Query: 455 LREYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTIAMLAHLACEKGIWGPHLIVVPTS 514
LR YQ G++WL + + IL DEMGLGKT TIA+ +LA GP LI+ P S
Sbjct: 48 LRPYQLQGVNWLAQCFHCQNGCILGDEMGLGKTCQTIALFIYLAGRLNDEGPFLILCPLS 107
Query: 515 VMLNWETEFLKWCPAFKILTYFGSAKERKFKRQGWLKPNSFHVCITTYRLIIQDSKVFKR 574
V+ NW+ E ++ P +TY G +R +Q + + FHV +TTY + ++D+ K
Sbjct: 108 VLSNWKEEMERFAPGLSCVTYAGDKDKRACLQQDLKQESRFHVLLTTYEICLKDASFLKS 167
Query: 575 KKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPLQNDLMELWSLMHFLMPHIF 634
W L++DEAH +KN S +TL F+ +LLTGTP+QN L EL+SL+ F+ P +F
Sbjct: 168 FPWSVLVVDEAHRLKNQSSLLHKTLSEFSVVFSLLLTGTPIQNSLQELYSLLSFVEPDLF 227
Query: 635 QSHQEFKDWFCNPISGMVEGQEKVNKEV--VDRLHNVLRPFILRRLKRDVEKQLPMKQEH 692
Q + V+ + + KE L+ +L+PF+LRR+K +V +LP K E
Sbjct: 228 SKEQ---------VEDFVQRYQDIEKESESASELYKLLQPFLLRRVKAEVATELPRKTEV 278
Query: 693 VIYCRLSKRQRNLYEDFIASSETQATLASANFFGMISVIMQLRKVCNHPDLFEG 746
VIY +S Q+ Y+ + +A + +V+ QLRK +HP LF+G
Sbjct: 279 VIYHGMSALQKKYYKAILMKDLDAFENETAKKVKLQNVLSQLRKCVDHPYLFDG 332
Score = 393 (143.4 bits), Expect = 1.2e-77, Sum P(2) = 1.2e-77
Identities = 79/154 (51%), Positives = 105/154 (68%)
Query: 996 GKLQELAILLRKLKSDGHRALIFTQMTKMLDILEEFISLYGYTYMRLDGSTQPEERQTLM 1055
GKL L LL L S GHR L+F+QMT+MLDIL++++ GY+Y R+DGS + EER +
Sbjct: 349 GKLHLLDKLLAFLYSKGHRVLLFSQMTQMLDILQDYLDYRGYSYERVDGSVRGEERHLAI 408
Query: 1056 QRFNTNPKIFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQDRCHRIGQTREVH 1115
+ F P IF F+LSTR+GGVG+NL ADTVIF+DSD+NP D QA R HRIGQ + V
Sbjct: 409 KNFGQQP-IFTFLLSTRAGGVGMNLTAADTVIFFDSDFNPQNDLQAAARAHRIGQNKSVK 467
Query: 1116 IYRLISESTIEENILKKANQKRALDDLVIQSGGY 1149
+ RLI T+EE + +KA K L + +I+ G +
Sbjct: 468 VIRLIGRDTVEEIVYRKAASKLQLTNTIIEGGHF 501
Score = 42 (19.8 bits), Expect = 4.7e-31, Sum P(2) = 4.7e-31
Identities = 9/27 (33%), Positives = 16/27 (59%)
Query: 109 EPGVQSKEADEDDAEQHSGFEPQLDAA 135
EP + SKE ED +++ E + ++A
Sbjct: 223 EPDLFSKEQVEDFVQRYQDIEKESESA 249
>RGD|2323132 [details] [associations]
symbol:LOC100359912 "SWI/SNF-related matrix-associated
actin-dependent regulator of chromatin a5-like" species:10116
"Rattus norvegicus" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0031491 "nucleosome binding" evidence=IEA] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR009057 InterPro:IPR015194 InterPro:IPR015195
Pfam:PF00176 Pfam:PF00271 Pfam:PF09110 Pfam:PF09111 PROSITE:PS51194
SMART:SM00490 SMART:SM00717 RGD:2323132 GO:GO:0005524 GO:GO:0003677
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 GO:GO:0004386 InterPro:IPR014001 PROSITE:PS51192
GO:GO:0016585 GO:GO:0031491 GO:GO:0043044
GeneTree:ENSGT00680000100002 SUPFAM:SSF101224 IPI:IPI00390811
Ensembl:ENSRNOT00000031851 Uniprot:F1M7H3
Length = 760
Score = 447 (162.4 bits), Expect = 1.7e-77, Sum P(2) = 1.7e-77
Identities = 89/192 (46%), Positives = 127/192 (66%)
Query: 557 VCITTYRLIIQDSKVFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPLQ 616
VC+T+Y ++I++ VFK+ W+YL++DEAH IKN KS+ + + F + R+LLTGTPLQ
Sbjct: 3 VCVTSYEMLIKEKSVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGTPLQ 62
Query: 617 NDLMELWSLMHFLMPHIFQSHQEFKDWF-CNPISGMVEGQEKVNKEVVDRLHNVLRPFIL 675
N+L ELWSL++FL+P +F S +F WF N G +K++V+RLH VLRPF+L
Sbjct: 63 NNLHELWSLLNFLLPDVFNSADDFDSWFDTNNCLG--------DKKLVERLHMVLRPFLL 114
Query: 676 RRLKRDVEKQLPMKQEHVIYCRLSKRQRNLYEDFIASS-ETQATLASANFFGMISVIMQL 734
RR+K DVEK LP K+E IY LSK QR Y + + + + +++++MQL
Sbjct: 115 RRIKADVEKSLPPKKEVKIYVGLSKMQREWYTRILMKDIDILNSAGKMDKMRLLNILMQL 174
Query: 735 RKVCNHPDLFEG 746
RK CNHP LF+G
Sbjct: 175 RKCCNHPYLFDG 186
Score = 422 (153.6 bits), Expect = 1.7e-77, Sum P(2) = 1.7e-77
Identities = 87/180 (48%), Positives = 117/180 (65%)
Query: 984 YFPDRRLIQFDCGKLQELAILLRKLKSDGHRALIFTQMTKMLDILEEFISLYGYTYMRLD 1043
Y D L+ + GK+ L LL KLK G R LIF+QMT++LDILE++ Y Y RLD
Sbjct: 193 YTTDMHLVT-NSGKMVVLDKLLPKLKEQGSRVLIFSQMTRVLDILEDYCMWRNYEYCRLD 251
Query: 1044 GSTQPEERQTLMQRFNT-NPKIFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQ 1102
G T +ERQ + +N N F+F+LSTR+GG+GINL AD VI YDSDWNP +D QA
Sbjct: 252 GQTPHDERQDSINAYNEPNSTKFVFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAM 311
Query: 1103 DRCHRIGQTREVHIYRLISESTIEENILKKANQKRALDDLVIQSGGYNTEFFKKLDPMEL 1162
DR HRIGQT+ V ++R I+++T+EE I+++A K LD +VIQ G + K+ E+
Sbjct: 312 DRAHRIGQTKTVRVFRFITDNTVEERIVERAEMKLRLDSIVIQQGRLVDQNLNKIGKDEM 371
>MGI|MGI:1915308 [details] [associations]
symbol:Chd1l "chromodomain helicase DNA binding protein
1-like" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=ISO] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISO] [GO:0006200 "ATP
catabolic process" evidence=ISO] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=ISO]
[GO:0006974 "response to DNA damage stimulus" evidence=ISO]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=ISO] InterPro:IPR000330 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
MGI:MGI:1915308 GO:GO:0005886 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0000166 GO:GO:0003677 GO:GO:0006281
GO:GO:0006974 GO:GO:0016887 GO:GO:0006338 GO:GO:0004386 HSSP:Q97XQ5
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR002589 PROSITE:PS51154 CTD:9557 HOGENOM:HOG000030789
HOVERGEN:HBG077542 OrthoDB:EOG4SXNBV OMA:TCQTIAL ChiTaRS:CHD1L
EMBL:AK014473 EMBL:AK165656 EMBL:BC052385 EMBL:BC057567
EMBL:BC062966 IPI:IPI00466859 IPI:IPI00890897 RefSeq:NP_080815.1
UniGene:Mm.41447 ProteinModelPortal:Q9CXF7 SMR:Q9CXF7
DIP:DIP-58953N STRING:Q9CXF7 PhosphoSite:Q9CXF7 PaxDb:Q9CXF7
PRIDE:Q9CXF7 Ensembl:ENSMUST00000029730 GeneID:68058 KEGG:mmu:68058
UCSC:uc008qow.1 UCSC:uc008qox.1 GeneTree:ENSGT00670000098110
InParanoid:Q9CXF7 NextBio:326336 Bgee:Q9CXF7 Genevestigator:Q9CXF7
Uniprot:Q9CXF7
Length = 900
Score = 486 (176.1 bits), Expect = 7.1e-77, Sum P(3) = 7.1e-77
Identities = 109/292 (37%), Positives = 165/292 (56%)
Query: 455 LREYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTIAMLAHLACEKGIWGPHLIVVPTS 514
LR YQ G++WLV + + IL DEMGLGKT TIA+L +L GP L++ P S
Sbjct: 40 LRSYQLEGVNWLVQCFHCQNGCILGDEMGLGKTCQTIALLIYLVGRLNDEGPFLVLCPLS 99
Query: 515 VMLNWETEFLKWCPAFKILTYFGSAKERKFKRQGWLKPNSFHVCITTYRLIIQDSKVFKR 574
V+ NW+ E ++ P +TY G +ER +Q + + FHV +TTY + ++D+ K
Sbjct: 100 VLSNWKEEMERFAPGLSCVTYTGDKEERARLQQDLRQESGFHVLLTTYEICLKDASFLKS 159
Query: 575 KKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPLQNDLMELWSLMHFLMPHIF 634
W L +DEAH +KN S +TL F++ R+LLTGTP+QN L EL+SL+ + P +F
Sbjct: 160 FSWSVLAVDEAHRLKNQSSLLHRTLSEFSAVFRLLLTGTPIQNSLRELYSLLCVVEPDLF 219
Query: 635 QSHQEFKDWFCNPISGMVEGQEKVNKEVVDRLHNVLRPFILRRLKRDVEKQLPMKQEHVI 694
++ +D F + EK +K + LH +L+PF+LRR+K V +LP K E V+
Sbjct: 220 -CREQVED-FVQRYQDI----EKESKSASE-LHRLLQPFLLRRVKAQVATELPKKTEVVV 272
Query: 695 YCRLSKRQRNLYEDFIASSETQATLASANFFGMISVIMQLRKVCNHPDLFEG 746
Y +S Q+ Y+ + +A + +++ QLRK +HP LF+G
Sbjct: 273 YHGMSALQKKYYKAILMKDLDAFENETAKKVKLQNILTQLRKCVDHPYLFDG 324
Score = 393 (143.4 bits), Expect = 7.1e-77, Sum P(3) = 7.1e-77
Identities = 80/154 (51%), Positives = 105/154 (68%)
Query: 996 GKLQELAILLRKLKSDGHRALIFTQMTKMLDILEEFISLYGYTYMRLDGSTQPEERQTLM 1055
GKL L LL L S GHR L+F+QMT MLDIL++++ GY+Y R+DGS + EER +
Sbjct: 341 GKLHLLDRLLAFLYSGGHRVLLFSQMTHMLDILQDYMDYRGYSYERVDGSVRGEERHLAI 400
Query: 1056 QRFNTNPKIFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQDRCHRIGQTREVH 1115
+ F P IF+F+LSTR+GGVG+NL ADTVIF DSD+NP D QA R HRIGQ + V
Sbjct: 401 KNFGNQP-IFVFLLSTRAGGVGMNLTAADTVIFVDSDFNPQNDLQAAARAHRIGQNKSVK 459
Query: 1116 IYRLISESTIEENILKKANQKRALDDLVIQSGGY 1149
+ RLI T+EE + +KA K L ++VI+ G +
Sbjct: 460 VIRLIGRDTVEEIVYRKAASKLQLTNMVIEGGHF 493
Score = 37 (18.1 bits), Expect = 7.1e-77, Sum P(3) = 7.1e-77
Identities = 6/14 (42%), Positives = 11/14 (78%)
Query: 1564 PVKRVLMIKPEKLK 1577
P+KR ++ PE+L+
Sbjct: 633 PIKRKKILSPEELE 646
Score = 37 (18.1 bits), Expect = 1.2e-39, Sum P(3) = 1.2e-39
Identities = 8/16 (50%), Positives = 10/16 (62%)
Query: 732 MQLRKVCNHPDLFEGR 747
++ R NH LFEGR
Sbjct: 568 LESRSYENHMYLFEGR 583
>UNIPROTKB|F1NS62 [details] [associations]
symbol:CHD1L "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=IEA]
[GO:0006974 "response to DNA damage stimulus" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR002464
Pfam:PF00176 Pfam:PF00271 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 GO:GO:0005886 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0003677 GO:GO:0006974 GO:GO:0006338
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
OMA:TCQTIAL GeneTree:ENSGT00670000098110 EMBL:AADN02037964
EMBL:AADN02037962 EMBL:AADN02037963 IPI:IPI00573125
Ensembl:ENSGALT00000024254 Uniprot:F1NS62
Length = 895
Score = 478 (173.3 bits), Expect = 1.7e-76, Sum P(2) = 1.7e-76
Identities = 118/296 (39%), Positives = 169/296 (57%)
Query: 455 LREYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTIAMLAHLACEKGIWGPHLIVVPTS 514
LR YQ G++WLV Y+ + IL DEMGLGKT TI++L +L + LI+ P S
Sbjct: 46 LRPYQLDGVNWLVQCYQVQHGCILGDEMGLGKTCQTISLLLYLTKKLTNKERSLILCPLS 105
Query: 515 VMLNWETEFLKWCPAFKILTYFGSAKERKFKRQGWLKPNS-FHVCITTYRLIIQDSKVFK 573
V+ NW+ E ++ P +TY G+ KE ++K Q LK S F V +TTY + ++D+ K
Sbjct: 106 VLSNWKEELERFAPGLSFVTYVGN-KEERYKLQQNLKEQSHFRVLLTTYEICLKDAAFLK 164
Query: 574 RKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPLQNDLMELWSLMHFLMPHI 633
W L++DEAH +KN S ++TL +LLTGTP+QN L EL+SL+ F+ P I
Sbjct: 165 FFDWAALVVDEAHRLKNQNSLLYETLTELPVGFSLLLTGTPIQNSLQELYSLLSFIEPDI 224
Query: 634 FQSHQ--EFKDWFCNPISGMVEGQEKVNKEVVDRLHNVLRPFILRRLKRDVEKQLPMKQE 691
F Q EF +++ VE + + KE LHN+L+PF+LRR+K +V LP K E
Sbjct: 225 FPRKQVKEFVEYY-----QAVEKESEPAKE----LHNLLQPFLLRRVKSEVTADLPKKVE 275
Query: 692 HVIYCRLSKRQRNLYEDFIASSETQATLASANFFGMI-SVIMQLRKVCNHPDLFEG 746
V+Y +S QR Y+ I + + A M+ +V++QLRK HP LF G
Sbjct: 276 VVLYHGMSALQRKYYKA-ILTKDLDAFEGGTGRKVMLQNVLIQLRKCVAHPYLFNG 330
Score = 385 (140.6 bits), Expect = 1.7e-76, Sum P(2) = 1.7e-76
Identities = 107/297 (36%), Positives = 155/297 (52%)
Query: 996 GKLQELAILLRKLKSDGHRALIFTQMTKMLDILEEFISLYGYTYMRLDGSTQPEERQTLM 1055
GKL L LL L GHR L+F+QMTK+LDIL++++ GY+Y RLDGS + EER +
Sbjct: 347 GKLCLLDKLLSFLYDGGHRVLLFSQMTKLLDILQDYMDYRGYSYERLDGSVRGEERHLAI 406
Query: 1056 QRFNTNPKIFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQDRCHRIGQTREVH 1115
+ F P IF+F+LSTR+GGVG+NL ADTVIF DSD+NP D QA R HRIGQ + V
Sbjct: 407 KNFGQQP-IFVFLLSTRAGGVGMNLTAADTVIFTDSDFNPQNDLQAIARAHRIGQHKPVK 465
Query: 1116 IYRLISESTIEENILKKANQKRALDDLVIQSGGYNTEFFKKLDPMEL-------FSGHRT 1168
I RLI T+EE I ++A K L + +++ G + K + +L F +
Sbjct: 466 IIRLIGRDTVEEIIYRRAASKLRLTNAIVEGGQFALGVHKPQEASDLQLSEILKFGLDKL 525
Query: 1169 LPMK--TMQKEKAINNGNEVSLSNADVEAALKCVEDEADYMALKRAEQEEAVD-NQEFTE 1225
L + T+Q + N E ++A L C E+ + E D ++E +
Sbjct: 526 LSSEGSTVQDVELENILGETKGGKWVMDAVLPCEEERNEDDTENHMYVYEGKDYSKEPSR 585
Query: 1226 EAVGRPEDDELVIEDTVRTDEPTDQGGCMTANNDNGMMLTG-NDPKEERALTFAAKE 1281
E + D+L+ +E + +G + N +LTG D R +A+E
Sbjct: 586 E--DKKAFDQLLDLQKALIEETSKEGRAL--RNKANTLLTGLRDQSTRRKHLLSAEE 638
>UNIPROTKB|H0YJG4 [details] [associations]
symbol:CHD8 "Chromodomain-helicase-DNA-binding protein 8"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0003677 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:AL135744 EMBL:AL161747
HGNC:HGNC:20153 Ensembl:ENST00000555935 Uniprot:H0YJG4
Length = 873
Score = 490 (177.5 bits), Expect = 1.9e-76, Sum P(2) = 1.9e-76
Identities = 119/306 (38%), Positives = 172/306 (56%)
Query: 455 LREYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTIAMLAHLACEKGIWGPHLIVVPTS 514
LREYQ G++WL+ + R N ILADEMGLGKTI +IA L + GI GP L++ P S
Sbjct: 37 LREYQLEGVNWLLFNWYNRQNCILADEMGLGKTIQSIAFLQEVY-NVGIHGPFLVIAPLS 95
Query: 515 VMLNWETEFLKWCPAFKILTYFGSAKERKFKRQ---------GWLKPNS--FHVCITTYR 563
+ NWE EF W + Y GS R+ +Q G L P + F ITT+
Sbjct: 96 TITNWEREFNTWTE-MNTIVYHGSLASRQMIQQYEMYCKDSRGRLIPGAYKFDALITTFE 154
Query: 564 LIIQDSKVFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPLQNDLMELW 623
+I+ D + +W+ +I+DEAH +KN + +L + + + ++LLTGTPLQN + EL+
Sbjct: 155 MILSDCPELREIEWRCVIIDEAHRLKNRNCKLLDSLKHMDLEHKVLLTGTPLQNTVEELF 214
Query: 624 SLMHFLMPHIFQSHQEF-KDWFCNPISGMVEGQEKVNKEVVDRLHNVLRPFILRRLKRDV 682
SL+HFL P F S EF KD+ G ++ +E+V K L +L+P +LRRLK DV
Sbjct: 215 SLLHFLEPSQFPSESEFLKDF------GDLKTEEQVQK-----LQAILKPMMLRRLKEDV 263
Query: 683 EKQLPMKQEHVIYCRLSKRQRNLYEDFIASSETQATLASA--NFFGMISVIMQLRKVCNH 740
EK L KQE +I L+ Q+ Y + + + + + N +++ +M+LRK CNH
Sbjct: 264 EKNLAPKQETIIEVELTNIQKKYYRAILEKNFSFLSKGAGHTNMPNLLNTMMELRKCCNH 323
Query: 741 PDLFEG 746
P L G
Sbjct: 324 PYLING 329
Score = 371 (135.7 bits), Expect = 1.9e-76, Sum P(2) = 1.9e-76
Identities = 75/152 (49%), Positives = 102/152 (67%)
Query: 996 GKLQELAILLRKLKSDGHRALIFTQMTKMLDILEEFISLYGYTYMRLDGSTQPEERQTLM 1055
GKL + LL KLK+ GH+ LIF+QM + LDILE+++ Y Y R+DG + RQ +
Sbjct: 359 GKLVLIDKLLPKLKAGGHKVLIFSQMVRCLDILEDYLIQRRYLYERIDGRVRGNLRQAAI 418
Query: 1056 QRFNT-NPKIFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQDRCHRIGQTREV 1114
RF+ + F+F+L TR+GG+GINL ADT I +DSDWNP D QAQ RCHRIGQ++ V
Sbjct: 419 DRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAV 478
Query: 1115 HIYRLISESTIEENILKKANQKRALDDLVIQS 1146
+YRLI+ ++ E + KA+ K LD V+QS
Sbjct: 479 KVYRLITRNSYEREMFDKASLKLGLDKAVLQS 510
Score = 39 (18.8 bits), Expect = 1.7e-41, Sum P(2) = 1.7e-41
Identities = 7/14 (50%), Positives = 10/14 (71%)
Query: 892 DILQQKTVRRSYLY 905
DIL+ ++R YLY
Sbjct: 389 DILEDYLIQRRYLY 402
>UNIPROTKB|F1MFS2 [details] [associations]
symbol:CHD1L "Chromodomain-helicase-DNA-binding protein
1-like" species:9913 "Bos taurus" [GO:0006974 "response to DNA
damage stimulus" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR002464 Pfam:PF00176 Pfam:PF00271 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 GO:GO:0005886 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0003677 GO:GO:0006974
GO:GO:0006338 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR002589 PROSITE:PS51154 GO:GO:0008026 IPI:IPI00710168
OMA:TCQTIAL GeneTree:ENSGT00670000098110 EMBL:DAAA02007335
Ensembl:ENSBTAT00000027762 Uniprot:F1MFS2
Length = 896
Score = 479 (173.7 bits), Expect = 2.8e-76, Sum P(2) = 2.8e-76
Identities = 108/294 (36%), Positives = 160/294 (54%)
Query: 455 LREYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTIAMLAHLACEKGIWGPHLIVVPTS 514
LR YQ G++WL + + IL DEMGLGKT TIA+ +LA GP LI+ P S
Sbjct: 48 LRPYQLQGVNWLAQCFHCQNGCILGDEMGLGKTCQTIALFIYLAGRLNDEGPFLILCPLS 107
Query: 515 VMLNWETEFLKWCPAFKILTYFGSAKERKFKRQGWLKPNSFHVCITTYRLIIQDSKVFKR 574
V+ NW+ E ++ P +TY G +R +Q + + FHV +TTY + ++D+ K
Sbjct: 108 VLSNWKEEMERFAPGLSCVTYAGDKDKRACLQQDLKQESRFHVLLTTYEICLKDASFLKS 167
Query: 575 KKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPLQNDLMELWSLMHFLMPHIF 634
W L++DEAH +KN S +TL F+ +LLTGTP+QN L EL+SL+ F+ P +F
Sbjct: 168 FPWSVLVVDEAHRLKNQSSLLHKTLSEFSVVFSLLLTGTPIQNSLQELYSLLSFVEPDLF 227
Query: 635 QSHQEFKDWFCNPISGMVEGQEKVNKEV--VDRLHNVLRPFILRRLKRDVEKQLPMKQEH 692
Q + V+ + + KE L+ +L+PF+LRR+K +V +LP K E
Sbjct: 228 SKEQ---------VEDFVQRYQDIEKESESASELYKLLQPFLLRRVKAEVATELPRKTEV 278
Query: 693 VIYCRLSKRQRNLYEDFIASSETQATLASANFFGMISVIMQLRKVCNHPDLFEG 746
VIY +S Q+ Y+ + A + +V+ QLRK +HP LF+G
Sbjct: 279 VIYHGMSALQKKYYKAILMKDLDAFENEMAKKVKLQNVLSQLRKCVDHPYLFDG 332
Score = 382 (139.5 bits), Expect = 2.8e-76, Sum P(2) = 2.8e-76
Identities = 79/154 (51%), Positives = 104/154 (67%)
Query: 996 GKLQELAILLRKLKSDGHRALIFTQMTKMLDILEEFISLYGYTYMRLDGSTQPEERQTLM 1055
GKL L LL L S GHR L+F+QMT+MLDIL++++ GY+Y R+DGS + EER +
Sbjct: 349 GKLHLLDKLLAFLYSKGHRVLLFSQMTQMLDILQDYLDYRGYSYERVDGSVRGEERHLAI 408
Query: 1056 QRFNTNPKIFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQDRCHRIGQTREVH 1115
+ F P IF F LSTR+GGVG+NL ADTVIF+DSD+NP D QA R HRIGQ + V
Sbjct: 409 KNFGQQP-IFTF-LSTRAGGVGMNLTAADTVIFFDSDFNPQNDLQAAARAHRIGQNKSVK 466
Query: 1116 IYRLISESTIEENILKKANQKRALDDLVIQSGGY 1149
+ RLI T+EE + +KA K L + +I+ G +
Sbjct: 467 VIRLIGRDTVEEIVYRKAASKLQLTNTIIEGGHF 500
Score = 42 (19.8 bits), Expect = 7.4e-30, Sum P(2) = 7.4e-30
Identities = 9/27 (33%), Positives = 16/27 (59%)
Query: 109 EPGVQSKEADEDDAEQHSGFEPQLDAA 135
EP + SKE ED +++ E + ++A
Sbjct: 223 EPDLFSKEQVEDFVQRYQDIEKESESA 249
>WB|WBGene00000482 [details] [associations]
symbol:chd-3 species:6239 "Caenorhabditis elegans"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0016818 "hydrolase activity,
acting on acid anhydrides, in phosphorus-containing anhydrides"
evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=TAS]
[GO:0040027 "negative regulation of vulval development"
evidence=IMP] [GO:0046580 "negative regulation of Ras protein
signal transduction" evidence=IMP] [GO:0001709 "cell fate
determination" evidence=IMP] [GO:0000118 "histone deacetylase
complex" evidence=ISS] [GO:0003682 "chromatin binding"
evidence=TAS] [GO:0003678 "DNA helicase activity" evidence=ISS]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0003682 GO:GO:0006338
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0040027
InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0003678
GO:GO:0001709 GO:GO:0046580 GO:GO:0008026 InterPro:IPR023780
PROSITE:PS00598 GO:GO:0000118 GeneTree:ENSGT00560000076896
EMBL:AF308444 EMBL:Z67884 EMBL:Z67881 PIR:T20160 RefSeq:NP_510140.1
UniGene:Cel.16950 ProteinModelPortal:Q22516 SMR:Q22516
STRING:Q22516 PaxDb:Q22516 EnsemblMetazoa:T14G8.1 GeneID:181421
KEGG:cel:CELE_T14G8.1 UCSC:T14G8.1 CTD:181421 WormBase:T14G8.1
HOGENOM:HOG000231124 InParanoid:Q22516 OMA:INIIMEL NextBio:913870
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
Uniprot:Q22516
Length = 1787
Score = 421 (153.3 bits), Expect = 6.1e-76, Sum P(5) = 6.1e-76
Identities = 97/232 (41%), Positives = 140/232 (60%)
Query: 994 DCGKLQELAILLRKLKSDGHRALIFTQMTKMLDILEEFISLYGYTYMRLDGSTQPEERQT 1053
+ GK L +LRKLK GHR LIF+QMT MLDILE+F + GY Y R+DGS ++RQ
Sbjct: 938 NAGKFVLLQKMLRKLKDGGHRVLIFSQMTMMLDILEDFCDVEGYKYERIDGSITGQQRQD 997
Query: 1054 LMQRFNT-NPKIFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQDRCHRIGQTR 1112
+ R+N K F+F+LSTR+GG+GINL ADTVI YDSDWNP D QA R HR+GQ
Sbjct: 998 AIDRYNAPGAKQFVFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRLGQKH 1057
Query: 1113 EVHIYRLISESTIEENILKKANQKRALDDLVIQSGGYNTEFFKKLDPMELFSGHRTLPMK 1172
+V IYR +++ ++EE I A +K L LV+++G + K + EL R +
Sbjct: 1058 KVMIYRFVTKGSVEERITSVAKKKMLLTHLVVRAG-LGAKDGKSMSKTELDDVLRWGTEE 1116
Query: 1173 TMQKEKAINNGNEVSLSNADVEAALKCVEDEA--DYMALKRAEQEEAVDNQE 1222
++E+A G + +++ + V D+A D++ L R ++EE D ++
Sbjct: 1117 LFKEEEAPVEGADGEGTSSKKPNEQEIVWDDAAVDFL-LDRNKEEEGQDGEK 1167
Score = 326 (119.8 bits), Expect = 6.1e-76, Sum P(5) = 6.1e-76
Identities = 77/209 (36%), Positives = 117/209 (55%)
Query: 537 GSAKERKFKRQGWLKPNSFHVCITTYRLIIQDSKVFKRKKWKYLILDEAHLIKNWKSQRW 596
G K K K LK FHV +T+Y I D + W L++DEAH +KN +S +
Sbjct: 720 GGPKVSKIKTLENLK---FHVLLTSYECINMDKAILSSIDWAALVVDEAHRLKNNQSTFF 776
Query: 597 QTLLNFNSKRRILLTGTPLQNDLMELWSLMHFLMPHIFQSHQEFKDWFCNPISGMVEGQE 656
+ L +N + R+LLTGTPLQN+L EL+ L++FL P F + F F + IS
Sbjct: 777 KNLREYNIQYRVLLTGTPLQNNLEELFHLLNFLAPDRFNQLESFTAEF-SEIS------- 828
Query: 657 KVNKEVVDRLHNVLRPFILRRLKRDVEKQLPMKQEHVIYCRLSKRQRNLYEDFIASSETQ 716
++ +++LHN+L P +LRRLK DV +P KQE ++ LS Q+ Y++ + +
Sbjct: 829 --KEDQIEKLHNLLGPHMLRRLKADVLTGMPSKQELIVRVELSAMQKKYYKNILTRNFDA 886
Query: 717 ATLASANF-FGMISVIMQLRKVCNHPDLF 744
+ + +I++IM+L+K CNHP LF
Sbjct: 887 LNVKNGGTQMSLINIIMELKKCCNHPYLF 915
Score = 193 (73.0 bits), Expect = 6.1e-76, Sum P(5) = 6.1e-76
Identities = 39/93 (41%), Positives = 52/93 (55%)
Query: 455 LREYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTIAMLAHLACEKGIWGPHLIVVPTS 514
L YQ G++WL + + ILADEMGLGKT+ ++ L L E GP LI P S
Sbjct: 616 LHPYQLEGINWLRHCWSNGTDAILADEMGLGKTVQSLTFLYTLMKEGHTKGPFLIAAPLS 675
Query: 515 VMLNWETEFLKWCPAFKILTYFGSAKERKFKRQ 547
++NWE E WCP F ++TY G + R R+
Sbjct: 676 TIINWEREAELWCPDFYVVTYVGDRESRMVIRE 708
Score = 46 (21.3 bits), Expect = 6.1e-76, Sum P(5) = 6.1e-76
Identities = 9/43 (20%), Positives = 21/43 (48%)
Query: 81 DSHKPVQQSPMREQPGIQYKEADENGAEEPGVQSKEADEDDAE 123
D H+ + E+ + E E+G E+ G +E + ++++
Sbjct: 4 DQHESIDGDETMEEDSM-LAEGHEDGEEDVGEDEEEVETEESQ 45
Score = 44 (20.5 bits), Expect = 6.1e-76, Sum P(5) = 6.1e-76
Identities = 16/70 (22%), Positives = 33/70 (47%)
Query: 1205 DYMALKRAEQEEAVDNQEFTEEAVGRPEDDELVIEDTVRTDEPTDQGGCMTANNDNGMML 1264
D+ A +QEE D E+ + + DE E R +E +++ + A + + +
Sbjct: 1253 DWSAQNNQQQEED-DGSEYGSDNGELLQTDEDYEERRRRREERSEKLPPLLAKVNGQIEV 1311
Query: 1265 TGNDPKEERA 1274
G +P++ +A
Sbjct: 1312 LGFNPRQRKA 1321
Score = 38 (18.4 bits), Expect = 1.9e-07, Sum P(4) = 1.9e-07
Identities = 11/47 (23%), Positives = 19/47 (40%)
Query: 1137 RALDDLVIQSGGYNTEFFKKLDPMELFSGHRTLPMKTMQKEKAINNG 1183
R D L +++GG + ++ H L MK + + NG
Sbjct: 882 RNFDALNVKNGGTQMSLINIIMELKKCCNHPYLFMKACLEAPKLKNG 928
>UNIPROTKB|Q22516 [details] [associations]
symbol:chd-3 "Chromodomain-helicase-DNA-binding protein 3
homolog" species:6239 "Caenorhabditis elegans" [GO:0032508 "DNA
duplex unwinding" evidence=ISS] InterPro:IPR001841
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
InterPro:IPR001965 InterPro:IPR002464 InterPro:IPR012957
InterPro:IPR012958 InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271
Pfam:PF00628 Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690
PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184
SMART:SM00249 SMART:SM00298 SMART:SM00490 Pfam:PF00385
GO:GO:0005524 GO:GO:0006355 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0003682 GO:GO:0006338 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0040027 InterPro:IPR016197
SUPFAM:SSF54160 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0003678 GO:GO:0001709 GO:GO:0046580
GO:GO:0008026 InterPro:IPR023780 PROSITE:PS00598 GO:GO:0000118
GeneTree:ENSGT00560000076896 EMBL:AF308444 EMBL:Z67884 EMBL:Z67881
PIR:T20160 RefSeq:NP_510140.1 UniGene:Cel.16950
ProteinModelPortal:Q22516 SMR:Q22516 STRING:Q22516 PaxDb:Q22516
EnsemblMetazoa:T14G8.1 GeneID:181421 KEGG:cel:CELE_T14G8.1
UCSC:T14G8.1 CTD:181421 WormBase:T14G8.1 HOGENOM:HOG000231124
InParanoid:Q22516 OMA:INIIMEL NextBio:913870 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 Uniprot:Q22516
Length = 1787
Score = 421 (153.3 bits), Expect = 6.1e-76, Sum P(5) = 6.1e-76
Identities = 97/232 (41%), Positives = 140/232 (60%)
Query: 994 DCGKLQELAILLRKLKSDGHRALIFTQMTKMLDILEEFISLYGYTYMRLDGSTQPEERQT 1053
+ GK L +LRKLK GHR LIF+QMT MLDILE+F + GY Y R+DGS ++RQ
Sbjct: 938 NAGKFVLLQKMLRKLKDGGHRVLIFSQMTMMLDILEDFCDVEGYKYERIDGSITGQQRQD 997
Query: 1054 LMQRFNT-NPKIFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQDRCHRIGQTR 1112
+ R+N K F+F+LSTR+GG+GINL ADTVI YDSDWNP D QA R HR+GQ
Sbjct: 998 AIDRYNAPGAKQFVFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRLGQKH 1057
Query: 1113 EVHIYRLISESTIEENILKKANQKRALDDLVIQSGGYNTEFFKKLDPMELFSGHRTLPMK 1172
+V IYR +++ ++EE I A +K L LV+++G + K + EL R +
Sbjct: 1058 KVMIYRFVTKGSVEERITSVAKKKMLLTHLVVRAG-LGAKDGKSMSKTELDDVLRWGTEE 1116
Query: 1173 TMQKEKAINNGNEVSLSNADVEAALKCVEDEA--DYMALKRAEQEEAVDNQE 1222
++E+A G + +++ + V D+A D++ L R ++EE D ++
Sbjct: 1117 LFKEEEAPVEGADGEGTSSKKPNEQEIVWDDAAVDFL-LDRNKEEEGQDGEK 1167
Score = 326 (119.8 bits), Expect = 6.1e-76, Sum P(5) = 6.1e-76
Identities = 77/209 (36%), Positives = 117/209 (55%)
Query: 537 GSAKERKFKRQGWLKPNSFHVCITTYRLIIQDSKVFKRKKWKYLILDEAHLIKNWKSQRW 596
G K K K LK FHV +T+Y I D + W L++DEAH +KN +S +
Sbjct: 720 GGPKVSKIKTLENLK---FHVLLTSYECINMDKAILSSIDWAALVVDEAHRLKNNQSTFF 776
Query: 597 QTLLNFNSKRRILLTGTPLQNDLMELWSLMHFLMPHIFQSHQEFKDWFCNPISGMVEGQE 656
+ L +N + R+LLTGTPLQN+L EL+ L++FL P F + F F + IS
Sbjct: 777 KNLREYNIQYRVLLTGTPLQNNLEELFHLLNFLAPDRFNQLESFTAEF-SEIS------- 828
Query: 657 KVNKEVVDRLHNVLRPFILRRLKRDVEKQLPMKQEHVIYCRLSKRQRNLYEDFIASSETQ 716
++ +++LHN+L P +LRRLK DV +P KQE ++ LS Q+ Y++ + +
Sbjct: 829 --KEDQIEKLHNLLGPHMLRRLKADVLTGMPSKQELIVRVELSAMQKKYYKNILTRNFDA 886
Query: 717 ATLASANF-FGMISVIMQLRKVCNHPDLF 744
+ + +I++IM+L+K CNHP LF
Sbjct: 887 LNVKNGGTQMSLINIIMELKKCCNHPYLF 915
Score = 193 (73.0 bits), Expect = 6.1e-76, Sum P(5) = 6.1e-76
Identities = 39/93 (41%), Positives = 52/93 (55%)
Query: 455 LREYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTIAMLAHLACEKGIWGPHLIVVPTS 514
L YQ G++WL + + ILADEMGLGKT+ ++ L L E GP LI P S
Sbjct: 616 LHPYQLEGINWLRHCWSNGTDAILADEMGLGKTVQSLTFLYTLMKEGHTKGPFLIAAPLS 675
Query: 515 VMLNWETEFLKWCPAFKILTYFGSAKERKFKRQ 547
++NWE E WCP F ++TY G + R R+
Sbjct: 676 TIINWEREAELWCPDFYVVTYVGDRESRMVIRE 708
Score = 46 (21.3 bits), Expect = 6.1e-76, Sum P(5) = 6.1e-76
Identities = 9/43 (20%), Positives = 21/43 (48%)
Query: 81 DSHKPVQQSPMREQPGIQYKEADENGAEEPGVQSKEADEDDAE 123
D H+ + E+ + E E+G E+ G +E + ++++
Sbjct: 4 DQHESIDGDETMEEDSM-LAEGHEDGEEDVGEDEEEVETEESQ 45
Score = 44 (20.5 bits), Expect = 6.1e-76, Sum P(5) = 6.1e-76
Identities = 16/70 (22%), Positives = 33/70 (47%)
Query: 1205 DYMALKRAEQEEAVDNQEFTEEAVGRPEDDELVIEDTVRTDEPTDQGGCMTANNDNGMML 1264
D+ A +QEE D E+ + + DE E R +E +++ + A + + +
Sbjct: 1253 DWSAQNNQQQEED-DGSEYGSDNGELLQTDEDYEERRRRREERSEKLPPLLAKVNGQIEV 1311
Query: 1265 TGNDPKEERA 1274
G +P++ +A
Sbjct: 1312 LGFNPRQRKA 1321
Score = 38 (18.4 bits), Expect = 1.9e-07, Sum P(4) = 1.9e-07
Identities = 11/47 (23%), Positives = 19/47 (40%)
Query: 1137 RALDDLVIQSGGYNTEFFKKLDPMELFSGHRTLPMKTMQKEKAINNG 1183
R D L +++GG + ++ H L MK + + NG
Sbjct: 882 RNFDALNVKNGGTQMSLINIIMELKKCCNHPYLFMKACLEAPKLKNG 928
>UNIPROTKB|B5DE69 [details] [associations]
symbol:chd8 "Chromodomain-helicase-DNA-binding protein 8"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0005634 "nucleus"
evidence=ISS] [GO:0071339 "MLL1 complex" evidence=ISS]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271 Pfam:PF07533
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298
SMART:SM00490 SMART:SM00592 Pfam:PF00385 GO:GO:0005524
GO:GO:0006355 GO:GO:0016055 GO:GO:0003677 GO:GO:0006351
GO:GO:0016568 GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0071339
InterPro:IPR023780 PROSITE:PS00598 HOVERGEN:HBG107676 CTD:57680
KO:K04494 EMBL:BC168549 RefSeq:NP_001131089.2 UniGene:Str.42730
GeneID:100192376 KEGG:xtr:100192376 Xenbase:XB-GENE-966847
Uniprot:B5DE69
Length = 2184
Score = 491 (177.9 bits), Expect = 4.0e-75, Sum P(4) = 4.0e-75
Identities = 121/315 (38%), Positives = 176/315 (55%)
Query: 455 LREYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTIAMLAHLACEKGIWGPHLIVVPTS 514
LREYQ G++WL+ + R N ILADEMGLGKTI +I L + GI GP L++ P S
Sbjct: 755 LREYQLEGVNWLLFNWYNRQNCILADEMGLGKTIQSITFLQEVY-NVGIRGPFLVIAPLS 813
Query: 515 VMLNWETEFLKWCPAFKILTYFGSAKERKFKRQ---------GWLKPNS--FHVCITTYR 563
+ NWE EF W + Y GS R+ +Q G L P + F ITT+
Sbjct: 814 TITNWEREFGSWTQ-MNTIVYHGSLASRQMIQQYEMYCKDSKGRLIPGAYKFDALITTFE 872
Query: 564 LIIQDSKVFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPLQNDLMELW 623
+++ D + +W+ +I+DEAH +KN + +L + + + ++LLTGTPLQN + EL+
Sbjct: 873 MVLSDCPELREIEWRCVIIDEAHRLKNRNCKLLDSLKHMDLEHKVLLTGTPLQNTVEELF 932
Query: 624 SLMHFLMPHIFQSHQEF-KDWFCNPISGMVEGQEKVNKEVVDRLHNVLRPFILRRLKRDV 682
SL+HFL P F S EF KD+ G ++ +E+V K L +L+P +LRRLK DV
Sbjct: 933 SLLHFLEPTQFSSEAEFLKDF------GDLKTEEQVQK-----LQAILKPMMLRRLKEDV 981
Query: 683 EKQLPMKQEHVIYCRLSKRQRNLYEDFIASSETQAT--LASANFFGMISVIMQLRKVCNH 740
EK L KQE +I L+ Q+ Y + + + T + +N +++ +M+LRK CNH
Sbjct: 982 EKNLAPKQETIIEVELTNIQKKYYRAILEKNFSFLTKGASQSNTPNLLNTMMELRKCCNH 1041
Query: 741 PDLFEG--RPIVSSF 753
P L G I+S F
Sbjct: 1042 PYLITGAEEKIISEF 1056
Score = 376 (137.4 bits), Expect = 4.0e-75, Sum P(4) = 4.0e-75
Identities = 87/217 (40%), Positives = 125/217 (57%)
Query: 996 GKLQELAILLRKLKSDGHRALIFTQMTKMLDILEEFISLYGYTYMRLDGSTQPEERQTLM 1055
GKL + LL KL++ GH+ LIF+QM + LDILE+++ Y Y R+DG + RQ +
Sbjct: 1077 GKLVLIDKLLPKLRAGGHKVLIFSQMVRCLDILEDYLIQRRYLYERIDGRVRGNMRQAAI 1136
Query: 1056 QRFNT-NPKIFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQDRCHRIGQTREV 1114
RF+ + F+F+L TR+GG+GINL ADT I +DSDWNP D QAQ RCHRIGQ++ V
Sbjct: 1137 DRFSRPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAV 1196
Query: 1115 HIYRLISESTIEENILKKANQKRALDDLVIQSGGYNTEFFKKLDPMELFSGHRTLPMKTM 1174
IYRLI+ ++ E + KA+ K LD V+QS P++ F+
Sbjct: 1197 KIYRLITRNSYEREMFDKASLKLGLDKAVLQSMSGRDNHLS--GPIQQFT--------KK 1246
Query: 1175 QKEKAINNGNEVSLSNADVEAALKCVEDEADYMALKR 1211
+ E + G ++ + D E + C ED D + L+R
Sbjct: 1247 EIEDLLRKGAYAAIMDEDDEGSKFCEED-IDQILLRR 1282
Score = 66 (28.3 bits), Expect = 4.0e-75, Sum P(4) = 4.0e-75
Identities = 34/116 (29%), Positives = 49/116 (42%)
Query: 1860 SLGWASSAFPANDAKLRSVPKSQSLGKHKLSLSDSVKCPKSKLRKTSMEHSEIQHSS-PE 1918
S G + + P+ SVP + H SLS SV C + R +S S HSS E
Sbjct: 1905 SRGISGHSRPSTPTTAPSVPTERQ-PSHLASLSSSVSCSPAPRRSSSCSSSS--HSSNSE 1961
Query: 1919 PVSNQSVATK-DANLRFDLIQEAWLEDMDGG-RLSCMDQDLSLETVLSS--EIPHN 1970
S++S K N + A L D + L+ DL+ E + + E PH+
Sbjct: 1962 DSSDESNGVKVKPNAG---LSHARLYDEESRLSLTASPADLTTEDSIQTALETPHS 2014
Score = 42 (19.8 bits), Expect = 4.0e-75, Sum P(4) = 4.0e-75
Identities = 15/52 (28%), Positives = 21/52 (40%)
Query: 1591 DVWLPQEDAILCAVVHEYGPNWSLVSD--ILYGMTASGY--YRGRYRHPVHC 1638
D+W PQ D + V + W +D +L G+ GY Y P C
Sbjct: 1553 DIWFPQVDQV--EVPSRW---WDREADKSLLIGVFKHGYEKYNTMRADPALC 1599
Score = 39 (18.8 bits), Expect = 2.6e-72, Sum P(4) = 2.6e-72
Identities = 16/61 (26%), Positives = 27/61 (44%)
Query: 1886 KHKLSLSDSVKCPKSKLRKTSMEHSEIQHSSPEPVSNQSVAT----KDANLRFDLIQEAW 1941
KHK + ++ +K S + ++ + PV NQ T ++A LR L + W
Sbjct: 2096 KHKFMGNGALDSAPHTQKKKSKKKMDLDMDTRIPVVNQKDGTLLLGEEAPLRCQLPE--W 2153
Query: 1942 L 1942
L
Sbjct: 2154 L 2154
Score = 39 (18.8 bits), Expect = 4.1e-40, Sum P(4) = 4.1e-40
Identities = 7/14 (50%), Positives = 10/14 (71%)
Query: 892 DILQQKTVRRSYLY 905
DIL+ ++R YLY
Sbjct: 1107 DILEDYLIQRRYLY 1120
Score = 38 (18.4 bits), Expect = 1.0e-74, Sum P(4) = 1.0e-74
Identities = 10/37 (27%), Positives = 21/37 (56%)
Query: 1309 NQ-LRPIDRYAIRFLELWDPIIDKTAVESEVKFEERE 1344
NQ ++ + R +++W P +D+ V S ++ +RE
Sbjct: 1538 NQAMKVLSGVEARQIDIWFPQVDQVEVPS--RWWDRE 1572
Score = 38 (18.4 bits), Expect = 1.1e-39, Sum P(4) = 1.1e-39
Identities = 12/45 (26%), Positives = 22/45 (48%)
Query: 952 SVFLQPTYKEKCSEVLS--PLLFPIRPAIVRRQVYFPDRRLIQFD 994
S+F++P +E+ S L LL +R ++ + P L + D
Sbjct: 1811 SLFIEPISEERASRALFRLDLLRRVREQVLCHPLLIPRLSLCRPD 1855
>UNIPROTKB|E1BS47 [details] [associations]
symbol:CHD7 "Chromodomain-helicase-DNA-binding protein 7"
species:9031 "Gallus gallus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001005
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013
PROSITE:PS51194 SMART:SM00298 SMART:SM00490 SMART:SM00717
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0003677
GO:GO:0003682 GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
GeneTree:ENSGT00560000077077 EMBL:AADN02022009 EMBL:AADN02022010
IPI:IPI00598234 Ensembl:ENSGALT00000005903 ArrayExpress:E1BS47
Uniprot:E1BS47
Length = 1326
Score = 477 (173.0 bits), Expect = 1.2e-74, Sum P(2) = 1.2e-74
Identities = 117/305 (38%), Positives = 167/305 (54%)
Query: 455 LREYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTIAMLAHLACEKGIWGPHLIVVPTS 514
LREYQ G++WL+ + N ILADEMGLGKTI +I L + KGI GP L++ P S
Sbjct: 154 LREYQLEGVNWLLFNWYNTRNCILADEMGLGKTIQSITFLYEIYL-KGIHGPFLVIAPLS 212
Query: 515 VMLNWETEFLKWCPAFKILTYFGSAKERK--------FKR-QGWLKPNS--FHVCITTYR 563
+ NWE EF W ++ Y GS R+ FK QG + S FH ITT+
Sbjct: 213 TIPNWEREFRTWTE-LNVVVYHGSQASRRTIQLYEMYFKDPQGRVIKGSYKFHAIITTFE 271
Query: 564 LIIQDSKVFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPLQNDLMELW 623
+I+ D + W+ +++DEAH +KN + + L + + ++LLTGTPLQN + EL+
Sbjct: 272 MILTDCPELRNIPWRCVVIDEAHRLKNRNCKLLEGLKMMDLEHKVLLTGTPLQNTVEELF 331
Query: 624 SLMHFLMPHIFQSHQEFKDWFCNPISGMVEGQEKVNKEVVDRLHNVLRPFILRRLKRDVE 683
SL+HFL P F S F F G ++ +E+V K L +L+P +LRRLK DVE
Sbjct: 332 SLLHFLEPGRFPSETTFMQEF-----GDLKTEEQVQK-----LQAILKPMMLRRLKEDVE 381
Query: 684 KQLPMKQEHVIYCRLSKRQRNLYEDFIASSETQATLAS--ANFFGMISVIMQLRKVCNHP 741
K L K+E +I L+ Q+ Y + + + AN +++ +M+LRK CNHP
Sbjct: 382 KNLAPKEETIIEVELTNIQKKYYRAILEKNFAFLSKGGGQANVPNLLNTMMELRKCCNHP 441
Query: 742 DLFEG 746
L G
Sbjct: 442 YLING 446
Score = 377 (137.8 bits), Expect = 1.2e-74, Sum P(2) = 1.2e-74
Identities = 80/163 (49%), Positives = 107/163 (65%)
Query: 985 FPDRRLIQFDCGKLQELAILLRKLKSDGHRALIFTQMTKMLDILEEFISLYGYTYMRLDG 1044
F + +IQ GKL + LL KLK+ GHR LIF+QM + LDILE+++ Y Y R+DG
Sbjct: 466 FQLQAMIQA-AGKLVLIDKLLPKLKAGGHRVLIFSQMVRCLDILEDYLIQRRYPYERIDG 524
Query: 1045 STQPEERQTLMQRFNT-NPKIFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQD 1103
+ RQ + RF+ + F+F+L TR+GG+GINL ADT I +DSDWNP D QAQ
Sbjct: 525 RVRGNLRQAAIDRFSRPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQA 584
Query: 1104 RCHRIGQTREVHIYRLISESTIEENILKKANQKRALDDLVIQS 1146
RCHRIGQ++ V IYRLI+ ++ E + KA+ K LD V+QS
Sbjct: 585 RCHRIGQSKSVKIYRLITRNSYEREMFDKASLKLGLDKAVLQS 627
Score = 39 (18.8 bits), Expect = 4.3e-39, Sum P(2) = 4.3e-39
Identities = 15/51 (29%), Positives = 22/51 (43%)
Query: 1580 NVWSRD-CVPSPDVWLPQEDAILCAVVHEYGPNWSLVSDILYGMTASGYYR 1629
N+ + D C+ W PQ D A H G + S+ I +T + Y R
Sbjct: 560 NLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKSV--KIYRLITRNSYER 608
>TAIR|locus:2116747 [details] [associations]
symbol:PKR2 "PICKLE RELATED 2" species:3702 "Arabidopsis
thaliana" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IEA] InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 EMBL:CP002687
GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
IPI:IPI00523018 RefSeq:NP_194918.2 UniGene:At.54572
ProteinModelPortal:F4JTF6 SMR:F4JTF6 PRIDE:F4JTF6
EnsemblPlants:AT4G31900.1 GeneID:829320 KEGG:ath:AT4G31900
OMA:SYWESES ArrayExpress:F4JTF6 Uniprot:F4JTF6
Length = 1202
Score = 489 (177.2 bits), Expect = 1.4e-74, Sum P(3) = 1.4e-74
Identities = 121/310 (39%), Positives = 179/310 (57%)
Query: 448 PFLLKFPLREYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTIAMLAHLACEKGIWGPH 507
P L L YQ GL++L + K+ N ILADEMGLGKTI +IA LA L E+ + PH
Sbjct: 218 PEFLTGTLHTYQLEGLNFLRYSWSKKTNVILADEMGLGKTIQSIAFLASLF-EENL-SPH 275
Query: 508 LIVVPTSVMLNWETEFLKWCPAFKILTYFGSAKERK--FKRQGWL---KPNSFHVCITTY 562
L+V P S + NWE EF W P ++ Y G ++ R ++ + + + + F V +TTY
Sbjct: 276 LVVAPLSTIRNWEREFATWAPHMNVVMYTGDSEARDVIWEHEFYFSEGRKSKFDVLLTTY 335
Query: 563 RLIIQDSKVFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPLQNDLMEL 622
++ V KW +I+DE H +KN KS+ + +L F SK +LLTGTPLQN+L EL
Sbjct: 336 EMVHPGISVLSPIKWTCMIIDEGHRLKNQKSKLYSSLSQFTSKHIVLLTGTPLQNNLNEL 395
Query: 623 WSLMHFLMPHIFQSHQEFKDWFCNPISGMVEGQEKVNKEV-VDRLHNVLRPFILRRLKRD 681
++LMHFL F S ++F+D +NKE + RLH +L P +LRRLK+D
Sbjct: 396 FALMHFLDADKFGSLEKFQD---------------INKEEQISRLHQMLAPHLLRRLKKD 440
Query: 682 VEK-QLPMKQEHVIYCRLSKRQRNLYEDFIASSETQATLASANFFGMISVIMQLRKVCNH 740
V K ++P K+E ++ +S +Q+ +Y+ I ++ L + +V+M+LR+VC+H
Sbjct: 441 VLKDKVPPKKELILRVDMSSQQKEVYKAVITNN--YQVLTKKRDAKISNVLMKLRQVCSH 498
Query: 741 PDL---FEGR 747
P L FE R
Sbjct: 499 PYLLPDFEPR 508
Score = 377 (137.8 bits), Expect = 1.4e-74, Sum P(3) = 1.4e-74
Identities = 115/343 (33%), Positives = 166/343 (48%)
Query: 962 KCSEVLS-PLLFP-IRPAIVRRQVYFPDRRLIQFDCGKLQELAILLRKLKSDGHRALIFT 1019
K +V S P L P P F +L++ GKLQ L ++ KLK GHR LI+T
Sbjct: 491 KLRQVCSHPYLLPDFEPRFEDANEAFT--KLLEAS-GKLQLLDKMMVKLKEQGHRVLIYT 547
Query: 1020 QMTKMLDILEEFISLYGYTYMRLDGSTQPEERQTLMQRFNT-NPKIFLFILSTRSGGVGI 1078
Q L +LE++ + + Y R+DG ERQ + RFN N F F+LSTR+GG+GI
Sbjct: 548 QFQHTLYLLEDYFTFKNWNYERIDGKISGPERQVRIDRFNAENSNRFCFLLSTRAGGIGI 607
Query: 1079 NLVGADTVIFYDSDWNPAMDQQAQDRCHRIGQTREVHIYRLISESTIEENILKKANQKRA 1138
NL ADTVI YDSDWNP D QA R HR+GQT +V IYRLI + T+EE +++ K
Sbjct: 608 NLATADTVIIYDSDWNPHADLQAMARVHRLGQTNKVMIYRLIHKGTVEERMMEITKNKML 667
Query: 1139 LDDLVIQSGGY---NTEFFKKLDPMELFSGHRT---LPMKTMQKEKAINNGNEVSLSNAD 1192
L+ LV+ + K ELFS K + AI + + +A
Sbjct: 668 LEHLVVGKQHLCQDELDDIIKYGSKELFSEENDEAGRSGKIHYDDAAIEQLLDRNHVDA- 726
Query: 1193 VEAALKCVEDEADYMALKRAEQEEAVDNQEFTEEAVGRPEDDELVIEDTVRTDEPTDQGG 1252
VE +L E+E D++ + E VD++ EA E + +VR + T
Sbjct: 727 VEVSLDD-EEETDFLKNFKVASFEYVDDEN---EAAALEEAQAIENNSSVRNADRTSHWK 782
Query: 1253 CMTANN-----DNGMMLTGNDPKEERALTFAAKEDDVDMLADV 1290
+ + + G + + + +A EDD+D L ++
Sbjct: 783 DLLKDKYEVQQAEELSALGKRKRNGKQVMYA--EDDLDGLEEI 823
Score = 46 (21.3 bits), Expect = 5.6e-40, Sum P(3) = 5.6e-40
Identities = 20/100 (20%), Positives = 43/100 (43%)
Query: 1126 EENILKKANQKRALDDLVIQSGGYNTEFFKKLDPMELFSGHRTLPMKTMQKEKAINNGNE 1185
+EN + +A+++ T +K L + + + + + K K NG +
Sbjct: 753 DENEAAALEEAQAIENNSSVRNADRTSHWKDL-LKDKYEVQQAEELSALGKRK--RNGKQ 809
Query: 1186 VSLSNADVEAALKCVEDEADYMA--LK-RAEQEEAVDNQE 1222
V + D++ + ++E +Y LK +++EE D E
Sbjct: 810 VMYAEDDLDGLEEISDEEDEYCLDDLKVTSDEEEEADEPE 849
Score = 38 (18.4 bits), Expect = 1.4e-74, Sum P(3) = 1.4e-74
Identities = 8/17 (47%), Positives = 10/17 (58%)
Query: 1918 EPVSNQSVATKDANLRF 1934
E + Q VA KD N+ F
Sbjct: 1039 EEIGFQEVACKDLNIPF 1055
Score = 38 (18.4 bits), Expect = 3.8e-39, Sum P(3) = 3.8e-39
Identities = 8/21 (38%), Positives = 13/21 (61%)
Query: 1765 SAALHDANSRQQDDKVSNFDR 1785
+AAL +A + + + V N DR
Sbjct: 757 AAALEEAQAIENNSSVRNADR 777
>TAIR|locus:2062999 [details] [associations]
symbol:BRM "AT2G46020" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS;IDA] [GO:0004386
"helicase activity" evidence=ISS] [GO:0005524 "ATP binding"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM;IEA;IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0010199 "organ boundary specification between
lateral organs and the meristem" evidence=IGI] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=NAS;TAS] [GO:0040029
"regulation of gene expression, epigenetic" evidence=RCA;IMP]
[GO:0005829 "cytosol" evidence=IDA] [GO:0003682 "chromatin binding"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR000330 InterPro:IPR001487 InterPro:IPR001650
InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271 PROSITE:PS50014
PROSITE:PS51194 SMART:SM00297 SMART:SM00490 SMART:SM00951
GO:GO:0005829 GO:GO:0005524 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0006355 GO:GO:0003677 GO:GO:0006351 GO:GO:0004386
EMBL:AC005397 HSSP:Q97XQ5 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0016585 GO:GO:0043044
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633 EMBL:AC004665
EMBL:AJ703891 IPI:IPI00529654 IPI:IPI00541940 PIR:G84897
RefSeq:NP_182126.2 RefSeq:NP_973695.1 UniGene:At.48598
ProteinModelPortal:Q6EVK6 SMR:Q6EVK6 IntAct:Q6EVK6 STRING:Q6EVK6
PaxDb:Q6EVK6 PRIDE:Q6EVK6 EnsemblPlants:AT2G46020.2 GeneID:819210
KEGG:ath:AT2G46020 TAIR:At2g46020 HOGENOM:HOG000029719
InParanoid:Q6EVK6 KO:K11647 OMA:EMNAPKE PhylomeDB:Q6EVK6
ProtClustDB:CLSN2681222 ArrayExpress:Q6EVK6 Genevestigator:Q6EVK6
GO:GO:0010199 GO:GO:0040029 Uniprot:Q6EVK6
Length = 2193
Score = 573 (206.8 bits), Expect = 6.1e-74, Sum P(6) = 6.1e-74
Identities = 117/289 (40%), Positives = 177/289 (61%)
Query: 436 ITFSTTQVRTKFPFLLKF-PLREYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTIAML 494
+ + +V + P +L+ LR+YQ +GL W++++Y +LNGILADEMGLGKT+ +A++
Sbjct: 961 LAHAVNEVVVRQPSMLQAGTLRDYQLVGLQWMLSLYNNKLNGILADEMGLGKTVQVMALI 1020
Query: 495 AHLACEKGIWGPHLIVVPTSVMLNWETEFLKWCPAFKILTYFGSAKERKFKRQGWLKPNS 554
A+L KG +GPHLI+VP +V++NW++E W P+ + Y G+ +R +
Sbjct: 1021 AYLMEFKGNYGPHLIIVPNAVLVNWKSELHTWLPSVSCIYYVGTKDQRSKLFSQEVCAMK 1080
Query: 555 FHVCITTYRLIIQDSKVFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTP 614
F+V +TTY I+ D + WKY+I+DEA +K+ +S + L + +RR+LLTGTP
Sbjct: 1081 FNVLVTTYEFIMYDRSKLSKVDWKYIIIDEAQRMKDRESVLARDLDRYRCQRRLLLTGTP 1140
Query: 615 LQNDLMELWSLMHFLMPHIFQSHQEFKDWFCNPIS--GMVEGQE----KVNKEVV--DRL 666
LQNDL ELWSL++ L+P +F + + F DWF P G E + K+V+ RL
Sbjct: 1141 LQNDLKELWSLLNLLLPDVFDNRKAFHDWFAQPFQKEGPAHNIEDDWLETEKKVIVIHRL 1200
Query: 667 HNVLRPFILRRLKRDVEKQLPMKQEHVIYCRLSKRQRNLYEDFIASSET 715
H +L PF+LRR DVE LP K V+ CR+S Q +Y D+I ++ T
Sbjct: 1201 HQILEPFMLRRRVEDVEGSLPAKVSVVLRCRMSAIQSAVY-DWIKATGT 1248
Score = 314 (115.6 bits), Expect = 6.1e-74, Sum P(6) = 6.1e-74
Identities = 79/198 (39%), Positives = 115/198 (58%)
Query: 957 PTYKEKCSEVLSPLLFPIRPAI---VRRQVYFPD--RRLIQFDCGKLQELAILLRKLKSD 1011
P Y+ K L+ +R A + YF D + + CGKL L +L KL+
Sbjct: 1264 PIYQAKIYRTLNNRCMELRKACNHPLLNYPYFNDFSKDFLVRSCGKLWILDRILIKLQRT 1323
Query: 1012 GHRALIFTQMTKMLDILEEFISLYGYTYMRLDGSTQPEERQTLMQRFNT-NPKIFLFILS 1070
GHR L+F+ MTK+LDILEE++ Y R+DG+T E+R++ + FN + F+F+LS
Sbjct: 1324 GHRVLLFSTMTKLLDILEEYLQWRRLVYRRIDGTTSLEDRESAIVDFNDPDTDCFIFLLS 1383
Query: 1071 TRSGGVGINLVGADTVIFYDSDWNPAMDQQAQDRCHRIGQTREVHIYRLISESTIEENIL 1130
R+ G G+NL ADTV+ YD D NP ++QA R HRIGQTREV + + E+ +E+
Sbjct: 1384 IRAAGRGLNLQTADTVVIYDPDPNPKNEEQAVARAHRIGQTREVKV--IYMEAVVEK--- 1438
Query: 1131 KKANQKRALDDLVIQSGG 1148
++QK D+L +SGG
Sbjct: 1439 LSSHQKE--DEL--RSGG 1452
Score = 125 (49.1 bits), Expect = 1.4e-27, Sum P(5) = 1.4e-27
Identities = 38/104 (36%), Positives = 53/104 (50%)
Query: 652 VEGQEKVNKEVVDRLHNVLRPFILRRLKRDVEKQLPMKQEHVIYCRLSKRQRNLYEDFIA 711
+E ++KV V+ RLH +L PF+LRR DVE LP K V+ CR+S Q +Y D+I
Sbjct: 1188 LETEKKVI--VIHRLHQILEPFMLRRRVEDVEGSLPAKVSVVLRCRMSAIQSAVY-DWIK 1244
Query: 712 SSET-------QATLASANFFGMISVI-------MQLRKVCNHP 741
++ T + A N + M+LRK CNHP
Sbjct: 1245 ATGTLRVDPDDEKLRAQKNPIYQAKIYRTLNNRCMELRKACNHP 1288
Score = 49 (22.3 bits), Expect = 6.1e-74, Sum P(6) = 6.1e-74
Identities = 20/72 (27%), Positives = 35/72 (48%)
Query: 1871 NDAKLRSVPKSQSLGKHKLSLSDSVKCPKS-KLRKTSMEHSEIQHSSPEPVSNQS-VATK 1928
+ ++LRSVP + KL +S PKS +L T + + +S E S +++
Sbjct: 1835 SSSRLRSVPAKKVASTSKLHVSS----PKSGRLNATQLTVEDNAEASRETWDGTSPISSS 1890
Query: 1929 DANLRFD-LIQE 1939
+A R +IQ+
Sbjct: 1891 NAGARMSHIIQK 1902
Score = 42 (19.8 bits), Expect = 6.1e-74, Sum P(6) = 6.1e-74
Identities = 13/46 (28%), Positives = 20/46 (43%)
Query: 191 AVDKVGRESSAEMGEDEAEPTVV-EEGHVQGNGNDLLAGSKLDTSG 235
A+ KV SS + GED+A +E + N + + D G
Sbjct: 513 AIGKVQDRSSDKTGEDQARSLECGKESQAAASSNGPIFSKEEDNVG 558
Score = 42 (19.8 bits), Expect = 1.7e-46, Sum P(5) = 1.7e-46
Identities = 9/22 (40%), Positives = 14/22 (63%)
Query: 1522 KLSRKRHDGSTELKTCESIFID 1543
+L +R DG+T L+ ES +D
Sbjct: 1348 RLVYRRIDGTTSLEDRESAIVD 1369
Score = 40 (19.1 bits), Expect = 6.1e-74, Sum P(6) = 6.1e-74
Identities = 9/34 (26%), Positives = 17/34 (50%)
Query: 1442 TSESKAVKEEPSVEPMSIDDDFYDEDATFSDAMS 1475
T+E E P+ +P+ +D + + T D+ S
Sbjct: 1794 TAERVDGSEMPAAQPLQVDRSYRSKLRTVVDSHS 1827
Score = 39 (18.8 bits), Expect = 6.1e-74, Sum P(6) = 6.1e-74
Identities = 7/17 (41%), Positives = 9/17 (52%)
Query: 868 LRCQKKPVYSTSLRELL 884
LR QK P+Y + L
Sbjct: 1258 LRAQKNPIYQAKIYRTL 1274
Score = 39 (18.8 bits), Expect = 6.6e-73, Sum P(6) = 6.6e-73
Identities = 21/91 (23%), Positives = 39/91 (42%)
Query: 1836 NHHLK-DSQVAENRFRDAARACIEDS-LGWASSA--FPANDAKLRSVPKSQ----SLGKH 1887
+H ++ +++ N F D + D+ A +A F + L S P + S GK
Sbjct: 1984 SHEVRSEAKKVHNLFFDLLKMSFPDTDFREARNALSFSGSAPTLVSTPTPRGAGISQGKR 2043
Query: 1888 KLSLSDSVKCPKSKLRKTSMEHSEIQHSSPE 1918
+ +++ P S R E+S I+ P+
Sbjct: 2044 QKLVNEPETEPSSPQRSQQRENSRIRVQIPQ 2074
Score = 37 (18.1 bits), Expect = 6.9e-46, Sum P(4) = 6.9e-46
Identities = 9/30 (30%), Positives = 15/30 (50%)
Query: 1046 TQPEERQTLMQRFNTNPKIFLFILSTRSGG 1075
T+P Q QR N+ ++ + T+ GG
Sbjct: 2052 TEPSSPQRSQQRENSRIRVQIPQKETKLGG 2081
>ZFIN|ZDB-GENE-030131-6320 [details] [associations]
symbol:chd8 "chromodomain helicase DNA binding
protein 8" species:7955 "Danio rerio" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0016817 "hydrolase activity, acting on acid anhydrides"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0071339 "MLL1 complex" evidence=ISS] [GO:0016055 "Wnt receptor
signaling pathway" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001005
InterPro:IPR001650 InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271
Pfam:PF07533 PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 SMART:SM00717 Pfam:PF00385
ZFIN:ZDB-GENE-030131-6320 GO:GO:0005524 GO:GO:0006355 GO:GO:0016055
GO:GO:0003677 GO:GO:0006351 GO:GO:0003682 GO:GO:0016568
GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0071339
InterPro:IPR023780 PROSITE:PS00598 EMBL:AL928674 IPI:IPI00919855
UniGene:Dr.81397 PRIDE:B0R0I6 HOVERGEN:HBG107676 OrthoDB:EOG4ZPDTC
Uniprot:B0R0I6
Length = 2511
Score = 482 (174.7 bits), Expect = 6.4e-74, Sum P(3) = 6.4e-74
Identities = 116/306 (37%), Positives = 169/306 (55%)
Query: 455 LREYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTIAMLAHLACEKGIWGPHLIVVPTS 514
LREYQ G++WL+ + R N ILADEMGLGKTI +IA+L+ + G+ P +I+ P S
Sbjct: 847 LREYQLEGVNWLLFNWYNRQNCILADEMGLGKTIQSIALLSEMF-SAGVQSPFMIIAPLS 905
Query: 515 VMLNWETEFLKWCPAFKILTYFGSAKERKFKRQ---------GWLKPNS--FHVCITTYR 563
+ NWE EF W + Y GS R+ +Q G L P + F ITT+
Sbjct: 906 TITNWEREFSNWTD-MNAIVYHGSLASRQMIQQYEMYCKDDKGHLIPGAYKFDALITTFE 964
Query: 564 LIIQDSKVFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPLQNDLMELW 623
+I+ D + W+ +++DEAH +KN + +L + ++LLTGTPLQN + EL+
Sbjct: 965 MILSDCPELREISWRCVVIDEAHRLKNRNCKLLDSLKMLEIEHKVLLTGTPLQNTVEELF 1024
Query: 624 SLMHFLMPHIFQSHQEFKDWFCNPISGMVEGQEKVNKEVVDRLHNVLRPFILRRLKRDVE 683
SL+HFL P F S EF F G ++ +E+V K L ++L+P +LRRLK DVE
Sbjct: 1025 SLLHFLEPAQFPSEIEFLREF-----GDLKTEEQVQK-----LQSILKPMMLRRLKEDVE 1074
Query: 684 KQLPMKQEHVIYCRLSKRQRNLYEDFIA---SSETQATLASANFFGMISVIMQLRKVCNH 740
K L KQE +I L+ Q+ Y + S + ++N +++ +M+LRK CNH
Sbjct: 1075 KNLAPKQETIIEVELTDVQKKYYRAILERNFSFLSMGATQNSNVPNLLNTMMELRKCCNH 1134
Query: 741 PDLFEG 746
P L G
Sbjct: 1135 PYLITG 1140
Score = 378 (138.1 bits), Expect = 6.4e-74, Sum P(3) = 6.4e-74
Identities = 83/178 (46%), Positives = 113/178 (63%)
Query: 981 RQVY---FPDRRL--IQFDCGKLQELAILLRKLKSDGHRALIFTQMTKMLDILEEFISLY 1035
R+VY PD L + GKL L LL +LK+ GH+ LIF+QM + LDILE+++
Sbjct: 1150 REVYDPLAPDFHLQALVRSAGKLVLLDKLLPRLKAGGHKVLIFSQMVRCLDILEDYLIHK 1209
Query: 1036 GYTYMRLDGSTQPEERQTLMQRFNT-NPKIFLFILSTRSGGVGINLVGADTVIFYDSDWN 1094
Y Y R+DG + RQ + RF+ + F+F+L TR+GG+GINL ADT + +DSDWN
Sbjct: 1210 RYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCVIFDSDWN 1269
Query: 1095 PAMDQQAQDRCHRIGQTREVHIYRLISESTIEENILKKANQKRALDDLVIQSGGYNTE 1152
P D QAQ RCHRIGQ++ V +YRLI+ ++ E +L KA+ K LD V+QS N E
Sbjct: 1270 PQNDLQAQARCHRIGQSKAVKVYRLITRNSYEREMLDKASLKLGLDRAVLQSMSGNKE 1327
Score = 53 (23.7 bits), Expect = 6.4e-74, Sum P(3) = 6.4e-74
Identities = 18/74 (24%), Positives = 31/74 (41%)
Query: 1203 EADYMALKRAEQEEAVDNQEFTEEAVGRPEDDELVIEDTVRTDEPTDQGGCMTANNDNGM 1262
E + ALK + +E T G P + + D +R D P D+ N +
Sbjct: 2133 EREQAALKMCDGDEENSILSLTPSQEGAPPES---LTDPLRVDWPKDRILINRIENLCSL 2189
Query: 1263 MLTGNDPKEERALT 1276
++TG+ P R ++
Sbjct: 2190 VITGHWPSGRRYIS 2203
Score = 37 (18.1 bits), Expect = 1.5e-38, Sum P(2) = 1.5e-38
Identities = 11/31 (35%), Positives = 13/31 (41%)
Query: 1580 NVWSRD-CVPSPDVWLPQEDAILCAVVHEYG 1609
N+ + D CV W PQ D A H G
Sbjct: 1254 NLTAADTCVIFDSDWNPQNDLQAQARCHRIG 1284
>RGD|1306794 [details] [associations]
symbol:Chd1 "chromodomain helicase DNA binding protein 1"
species:10116 "Rattus norvegicus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=ISO]
[GO:0035064 "methylated histone residue binding" evidence=ISO]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 Pfam:PF00385 RGD:1306794 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0006338 GO:GO:0004386
InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR023780 InterPro:IPR023779
PROSITE:PS00598 GeneTree:ENSGT00560000076896 OrthoDB:EOG4PG601
IPI:IPI00767719 Ensembl:ENSRNOT00000019358 UCSC:RGD:1306794
Uniprot:D4AAG9
Length = 904
Score = 526 (190.2 bits), Expect = 2.3e-73, Sum P(3) = 2.3e-73
Identities = 111/292 (38%), Positives = 169/292 (57%)
Query: 455 LREYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTIAMLAHLACEKGIWGPHLIVVPTS 514
LR+YQ GL+WL + K + ILADEMGLGKTI TI+ L +L E ++GP L+VVP S
Sbjct: 479 LRDYQLNGLNWLAHSWCKGNSCILADEMGLGKTIQTISFLNYLFHEHQLYGPFLLVVPLS 538
Query: 515 VMLNWETEFLKWCPAFKILTYFGSAKERKFKR-QGWLKPNS----FHVCITTYRLIIQDS 569
+ +W+ E W + Y G R R W+ P + F++ +TTY ++++D
Sbjct: 539 TLTSWQREIQTWASQMNAVVYLGDINSRNMIRTHEWMHPQTKRLKFNILLTTYEILLKDK 598
Query: 570 KVFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPLQNDLMELWSLMHFL 629
W ++ +DEAH +KN S ++TL++F S R+L+TGTPLQN L ELWSL+HF+
Sbjct: 599 AFLGGLNWAFIGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSLLHFI 658
Query: 630 MPHIFQSHQEFKDWFCNPISGMVEGQEKVNKEVVDRLHNVLRPFILRRLKRDVEKQLPMK 689
MP F S ++F++ G G ++KE L PF+LRR+K+DVEK LP K
Sbjct: 659 MPEKFSSWEDFEE---EHGKGREYGYASLHKE--------LEPFLLRRVKKDVEKSLPAK 707
Query: 690 QEHVIYCRLSKRQRNLYEDFIASSETQATLAS-ANFFGMISVIMQLRKVCNH 740
E ++ +S Q+ Y+ + + + S + G ++++M+L+K CNH
Sbjct: 708 VEQILRMEMSALQKQYYKWILTRNYKALSKGSKGSTSGFLNIMMELKKCCNH 759
Score = 296 (109.3 bits), Expect = 2.3e-73, Sum P(3) = 2.3e-73
Identities = 63/120 (52%), Positives = 80/120 (66%)
Query: 996 GKLQELAILLRKLKSDGHRALIFTQMTKMLDILEEFISLYGYTYMRLDGSTQPEERQTLM 1055
GKL L LL +L+ G+R LIF+QM +MLDIL E++ + + RLDGS RQ L
Sbjct: 786 GKLILLDKLLIRLRERGNRVLIFSQMVRMLDILAEYLKYRQFPFQRLDGSIGELRRQAL- 844
Query: 1056 QRFNT-NPKIFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQDRCHRIGQTREV 1114
FN + F F+LSTR+GG+GINL ADTV+ +DSDWNP D QAQ R HRIGQ ++V
Sbjct: 845 DHFNAXGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQV 904
Score = 57 (25.1 bits), Expect = 2.3e-73, Sum P(3) = 2.3e-73
Identities = 19/72 (26%), Positives = 31/72 (43%)
Query: 198 ESSAEMGEDEAEPTVVEEGHVQGNGNDLLAGSKLDTSGSLVRRCDEINGGLSISENHLLD 257
E S G E+ + + G G+G+ +GS D S S D +G S S++ +
Sbjct: 7 EESVRNGSGESSQSEDDSGSASGSGSGSSSGSSSDGSSSQSGSSDSDSGSDSGSQSES-E 65
Query: 258 IETSQVRDTSKK 269
+TS+ K
Sbjct: 66 SDTSRENKVQAK 77
Score = 48 (22.0 bits), Expect = 2.0e-72, Sum P(3) = 2.0e-72
Identities = 27/116 (23%), Positives = 52/116 (44%)
Query: 188 KRYAVDKVGRESSAEMGED-EAEPTVV-------EEGHVQGNGNDLLAGSKLDTSGSLVR 239
+R A G E + ED +A + V E+ + G+G+ +GS ++ +
Sbjct: 112 QRPASSNSGSEEDSSSSEDSDASSSDVKRKKHNDEDWQMSGSGSPSQSGSDSESEDERDK 171
Query: 240 R-CDEINGGLSISENHLLDIETSQVRDTSK-KSGAST--QKQALYDFSDEQEDGDF 291
CD +N +++ + ++ SK KSG QK+ D S++++D D+
Sbjct: 172 SSCDGTESDYE-PKNK---VKSRKPQNRSKSKSGKKILGQKKRQIDSSEDEDDEDY 223
Score = 44 (20.5 bits), Expect = 5.3e-72, Sum P(3) = 5.3e-72
Identities = 12/42 (28%), Positives = 22/42 (52%)
Query: 86 VQQSPM----REQPGIQYKEADENGAEEPGVQSKEADEDDAE 123
VQ+S M +QP Q + +G+EE S+++D ++
Sbjct: 96 VQRSAMLRKQTQQPQQQRPASSNSGSEEDSSSSEDSDASSSD 137
Score = 37 (18.1 bits), Expect = 2.9e-71, Sum P(3) = 2.9e-71
Identities = 7/21 (33%), Positives = 12/21 (57%)
Query: 117 ADEDDAEQHSGFEPQLDAADI 137
A E D + ++GFE + D+
Sbjct: 294 AIEADGDPNAGFEKSKEPGDV 314
>UNIPROTKB|F1NVT7 [details] [associations]
symbol:CHD6 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR023780 GeneTree:ENSGT00560000077077 EMBL:AADN02019534
EMBL:AADN02019532 EMBL:AADN02019533 IPI:IPI00818616
Ensembl:ENSGALT00000040615 ArrayExpress:F1NVT7 Uniprot:F1NVT7
Length = 1257
Score = 473 (171.6 bits), Expect = 1.3e-72, Sum P(3) = 1.3e-72
Identities = 117/305 (38%), Positives = 169/305 (55%)
Query: 455 LREYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTIAMLAHLACEKGIWGPHLIVVPTS 514
LREYQ G++WL+ + R N ILADEMGLGKTI +I L+ + GI GP LI+ P S
Sbjct: 383 LREYQLEGMNWLLFNWYNRKNCILADEMGLGKTIQSITFLSEIFL-MGIHGPFLIIAPLS 441
Query: 515 VMLNWETEFLKWCPAFKILTYFGSAKERKFKRQ---------GWLKPN--SFHVCITTYR 563
+ NWE EF W + Y GS R+ +Q G P F V ITT+
Sbjct: 442 TITNWEREFRTWTE-MNAIVYHGSQISRQMIQQYEMVYRDTQGNPLPGIFKFQVVITTFE 500
Query: 564 LIIQDSKVFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPLQNDLMELW 623
+I+ D K+ +W+ +++DEAH +KN + + L + ++LLTGTPLQN + EL+
Sbjct: 501 MILADCPELKKIQWRCVVIDEAHRLKNRNCKLLEGLKLMALEHKVLLTGTPLQNSVEELF 560
Query: 624 SLMHFLMPHIFQSHQEFKDWFCNPISGMVEGQEKVNKEVVDRLHNVLRPFILRRLKRDVE 683
SL++FL P F S F + F G ++ +E+V K L ++L+P +LRRLK DVE
Sbjct: 561 SLLNFLEPQQFPSETAFLEEF-----GDLKTEEQVKK-----LQSILKPMMLRRLKDDVE 610
Query: 684 KQLPMKQEHVIYCRLSKRQRNLYEDFIASSETQATLASA--NFFGMISVIMQLRKVCNHP 741
K L KQE +I L+ Q+ Y + + + + + N +I+ +M+LRK CNHP
Sbjct: 611 KNLAPKQETIIEVELTNIQKKYYRAILEKNFSFLSKGANQHNMPNLINTMMELRKCCNHP 670
Query: 742 DLFEG 746
L G
Sbjct: 671 YLING 675
Score = 368 (134.6 bits), Expect = 1.3e-72, Sum P(3) = 1.3e-72
Identities = 83/183 (45%), Positives = 114/183 (62%)
Query: 985 FPDRRLIQFDCGKLQELAILLRKLKSDGHRALIFTQMTKMLDILEEFISLYGYTYMRLDG 1044
F + +IQ GKL + LL KL + GH+ LIF+QM + LDILE+++ YTY R+DG
Sbjct: 695 FQLQAMIQA-AGKLVLIDKLLPKLIAGGHKVLIFSQMVRCLDILEDYLIQRRYTYERIDG 753
Query: 1045 STQPEERQTLMQRF-NTNPKIFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQD 1103
+ RQ + RF + F+F+L TR+GG+GINL ADT I +DSDWNP D QAQ
Sbjct: 754 RVRGNLRQAAIDRFCKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQA 813
Query: 1104 RCHRIGQTREVHIYRLISESTIEENILKKANQKRALDDLVIQS----GGYNTEFFKKLDP 1159
RCHRIGQ++ V +YRLI+ ++ E + KA+ K LD V+Q GG N ++L
Sbjct: 814 RCHRIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQDINRKGGTNG--VQQLSK 871
Query: 1160 MEL 1162
ME+
Sbjct: 872 MEV 874
Score = 46 (21.3 bits), Expect = 1.3e-72, Sum P(3) = 1.3e-72
Identities = 13/34 (38%), Positives = 16/34 (47%)
Query: 94 QPGIQYKEADENGAEEPGVQSKEADEDDAEQHSG 127
+PG Q D GA GV+ K +D EQ G
Sbjct: 2 RPGAQNGMQD-TGAVGTGVKKKRKKKDLGEQEGG 34
Score = 37 (18.1 bits), Expect = 1.2e-71, Sum P(3) = 1.2e-71
Identities = 11/55 (20%), Positives = 26/55 (47%)
Query: 25 NISKDVKKFWMKIEKLVLYKHQMEVDVRKKKALDKQLEFLLGQTERYSSMLAENL 79
++ + + W K+EK YK+ ++ ++ L+ L R + +LA+ +
Sbjct: 359 HMERPASESWQKLEKSREYKNSNQL---REYQLEGMNWLLFNWYNRKNCILADEM 410
Score = 37 (18.1 bits), Expect = 5.1e-38, Sum P(3) = 5.1e-38
Identities = 9/28 (32%), Positives = 15/28 (53%)
Query: 1039 YMRLDGSTQPEERQTLMQRFNTNPKIFL 1066
+ LD + +ER T +RFN + +L
Sbjct: 990 FSELDSDS--DERPTRSRRFNEKTRRYL 1015
>WB|WBGene00007053 [details] [associations]
symbol:chd-7 species:6239 "Caenorhabditis elegans"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0016817 "hydrolase activity, acting on acid
anhydrides" evidence=IEA] InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001005 InterPro:IPR001650 InterPro:IPR006576
Pfam:PF00176 Pfam:PF00271 Pfam:PF07533 PROSITE:PS50013
PROSITE:PS51194 SMART:SM00298 SMART:SM00490 SMART:SM00592
SMART:SM00717 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
GO:GO:0003677 GO:GO:0003682 GO:GO:0004386 InterPro:IPR016197
SUPFAM:SSF54160 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR017877 PROSITE:PS50090
InterPro:IPR023780 KO:K14437 GeneTree:ENSGT00560000077077
EMBL:FO080504 EMBL:FO080107 RefSeq:NP_491426.2 PaxDb:O61845
EnsemblMetazoa:T04D1.4 GeneID:172079 KEGG:cel:CELE_T04D1.4
UCSC:T04D1.4 CTD:172079 WormBase:T04D1.4 HOGENOM:HOG000213105
InParanoid:O61845 OMA:LLAFRME NextBio:873933 Uniprot:O61845
Length = 2967
Score = 476 (172.6 bits), Expect = 2.0e-72, Sum P(5) = 2.0e-72
Identities = 120/323 (37%), Positives = 175/323 (54%)
Query: 455 LREYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTIAMLAHLACEKGIWGPHLIVVPTS 514
LREYQ G+DWL+ Y N ILADEMGLGKT+ TI L+ + + GI GP L+VVP S
Sbjct: 1197 LREYQFEGVDWLLYCYYNAQNCILADEMGLGKTVQTITFLSRIY-DYGIHGPFLVVVPLS 1255
Query: 515 VMLNWETEFLKWCPAFKILTYFGSAKERKFKRQ-------------GWLKPNSFHV--CI 559
+ NW EF W + Y GSA R+ +Q W K N + I
Sbjct: 1256 TIQNWVREFETWTD-MNAIVYHGSAYAREVLQQYEVFYDKRHCGAKNW-KKNFVKIDALI 1313
Query: 560 TTYRLIIQDSKVFKRKKWKYLILDEAHLIKNWKSQRWQT-LLNFNSKRRILLTGTPLQND 618
TT+ ++ D + K+ W+ ++DEAH +KN + LL F + R+LLTGTPLQN+
Sbjct: 1314 TTFETVVSDVEFLKKIPWRVCVIDEAHRLKNRNCKLLVNGLLAFRMEHRVLLTGTPLQNN 1373
Query: 619 LMELWSLMHFLMPHIFQSHQEFKDWFCNPISGMVEGQEKVNKEVVDRLHNVLRPFILRRL 678
+ EL+SL++FL P F + F + F G + ++V K L +L+P +LRRL
Sbjct: 1374 IDELFSLLNFLHPQQFDNSATFLEQF-----GSCQTDDQVQK-----LQEILKPMMLRRL 1423
Query: 679 KRDVEKQLPMKQEHVIYCRLSKRQRNLYEDFIASSETQATLASANFFGMISVIMQLRKVC 738
K DVEK L K+E +I +LS Q+ Y + + + ++ +++V+M+LRK C
Sbjct: 1424 KEDVEKSLGPKEETIIEVQLSDMQKKFYRAILERNFSHLCKGTSAP-SLMNVMMELRKCC 1482
Query: 739 NHPDLFEG--RPIVSSFDMSGID 759
NHP L G I++ F ++ D
Sbjct: 1483 NHPFLINGAEEAIMNDFRLAHPD 1505
Score = 397 (144.8 bits), Expect = 2.0e-72, Sum P(5) = 2.0e-72
Identities = 81/160 (50%), Positives = 109/160 (68%)
Query: 988 RRLIQFDCGKLQELAILLRKLKSDGHRALIFTQMTKMLDILEEFISLYGYTYMRLDGSTQ 1047
+ LIQ GK+ + LL KL+ DGH+ LIF+QM K+LD+LEEF+ Y + R+DG+ +
Sbjct: 1514 KALIQAS-GKVVLIEKLLPKLRKDGHKVLIFSQMVKVLDLLEEFLISMSYPFERIDGNVR 1572
Query: 1048 PEERQTLMQRFNT-NPKIFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQDRCH 1106
+ RQ + RF+ N F+F+L TR+GG+GINL ADTVI +DSDWNP D QAQ RCH
Sbjct: 1573 GDLRQAAIDRFSKENSDRFVFLLCTRAGGLGINLTAADTVIIFDSDWNPQNDLQAQARCH 1632
Query: 1107 RIGQTREVHIYRLISESTIEENILKKANQKRALDDLVIQS 1146
RIGQ + V +YRLI+ +T E + KA+ K LD V+QS
Sbjct: 1633 RIGQKKLVKVYRLITSNTYEREMFDKASLKLGLDKAVLQS 1672
Score = 58 (25.5 bits), Expect = 3.7e-72, Sum P(6) = 3.7e-72
Identities = 38/158 (24%), Positives = 69/158 (43%)
Query: 1120 ISESTIEENILKKANQKRALDDLVIQSGGYNTEFFKKLDPMELFSGHRTLPMKTMQKEKA 1179
+S+ +EE +LKK +D+ +S +N E + + L +T+ ++ QK
Sbjct: 1683 LSKKDVEE-LLKKGAYGSIMDE-ENESSKFNEEDIETI----LQRRTQTITLEAGQKGSL 1736
Query: 1180 INNGNEVSLSNADVEAALKCVEDEADYMALKRAEQEEAVDNQEFTEEAVGRPEDDELVIE 1239
S N + + D+ ++ K AE+ + VD E+A P+ EL+IE
Sbjct: 1737 FAKATFNSSHNKGDDIDI----DDPEFWT-KWAEKAQ-VD----VEKATATPDGRELIIE 1786
Query: 1240 D----TVRTDEPTDQGGCMTANNDNGMMLTGNDPKEER 1273
+ T R +E D+G + ++G G K +R
Sbjct: 1787 EPRKRTKRFEENKDEGDS-DGSEESGNRKRGAAEKRKR 1823
Score = 49 (22.3 bits), Expect = 2.0e-72, Sum P(5) = 2.0e-72
Identities = 12/50 (24%), Positives = 24/50 (48%)
Query: 1189 SNADVEAALKCVEDEADYMALKRAEQEEAVDNQEFTEEAVGRPEDDELVI 1238
S + AA +A +A + +Q++A Q+ ++A +EL+I
Sbjct: 2488 STSSATAAAAAASAQAAALAAAQQQQQQAQQAQQAAQQAQSAKTQEELLI 2537
Score = 44 (20.5 bits), Expect = 2.0e-72, Sum P(5) = 2.0e-72
Identities = 13/43 (30%), Positives = 24/43 (55%)
Query: 81 DSHKPVQQSPMREQPGIQYKEADENGAEEPGVQSKEADEDDAE 123
D P Q+ +++ G K+AD +E GV+ ++D++D E
Sbjct: 929 DDFYP-QRGRGKKKGGGGKKKADPT--DEAGVEGAKSDDEDDE 968
Score = 43 (20.2 bits), Expect = 4.9e-72, Sum P(6) = 4.9e-72
Identities = 11/42 (26%), Positives = 19/42 (45%)
Query: 75 LAENLVDSHKPVQQSPMREQPGIQYKEADENGAEEPGVQSKE 116
+ E+ V + V+ P + P Q ENG+ P Q ++
Sbjct: 463 MQESPVPNAPQVKMEPEKPSPYQQQYNGMENGSGNPYAQQQQ 504
Score = 42 (19.8 bits), Expect = 2.0e-72, Sum P(5) = 2.0e-72
Identities = 11/29 (37%), Positives = 16/29 (55%)
Query: 198 ESSAEMGEDEAEPTVVEEGHVQG-NGNDL 225
E S E GE+++E V +E G NG +
Sbjct: 1007 EGSEENGEEKSEEKVKKEPKENGENGESV 1035
Score = 38 (18.4 bits), Expect = 3.7e-72, Sum P(6) = 3.7e-72
Identities = 11/51 (21%), Positives = 24/51 (47%)
Query: 1516 SPDSDSKLSRKR--HDGSTELKTCESIFIDLEQKSASRSKMGGKISITAMP 1564
S + K SRKR +D +++ + + + Q + ++ I++ MP
Sbjct: 2305 SSSASRKASRKRPNNDNDAKMRAMQQMLMG--QGGSGAAEYASMIALMLMP 2353
Score = 37 (18.1 bits), Expect = 3.3e-72, Sum P(5) = 3.3e-72
Identities = 16/72 (22%), Positives = 35/72 (48%)
Query: 57 LDKQLEFLLGQTERY--SSMLAENLVDSHKPVQQSPMREQPGIQYKEADENGAEEPGVQS 114
++K L +G+ E+ + +AE ++ + + ++++P KE ENG E G +
Sbjct: 985 VEKILNMRMGKVEKKVPETEVAEGSEENGEEKSEEKVKKEP----KENGENG-ESVG--N 1037
Query: 115 KEADEDDAEQHS 126
E+ + E +
Sbjct: 1038 GESSKSKTESET 1049
Score = 37 (18.1 bits), Expect = 1.8e-71, Sum P(6) = 1.8e-71
Identities = 9/24 (37%), Positives = 14/24 (58%)
Query: 261 SQVRDTSKKSGASTQKQALYDFSD 284
+Q+ TS S +S Q+ A +F D
Sbjct: 602 AQIPATSTPSTSSQQQNAYPEFPD 625
Score = 37 (18.1 bits), Expect = 2.3e-71, Sum P(6) = 2.3e-71
Identities = 11/42 (26%), Positives = 15/42 (35%)
Query: 88 QSPMREQPGIQYKEADENGAEEPGVQSKEADEDDAEQHSGFE 129
+ P E +E + P QS DD E +G E
Sbjct: 792 EEPAEEPAEEPVEEPEPMDDSSPVDQSTPVKADDIENFAGVE 833
>UNIPROTKB|H3BTW3 [details] [associations]
symbol:CHD9 "Chromodomain-helicase-DNA-binding protein 9"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
InterPro:IPR017956 Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013
PROSITE:PS51194 SMART:SM00298 SMART:SM00384 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0003677
GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780 EMBL:AC007906
EMBL:AC079416 HGNC:HGNC:25701 Ensembl:ENST00000565803 Bgee:H3BTW3
Uniprot:H3BTW3
Length = 1099
Score = 464 (168.4 bits), Expect = 2.5e-72, Sum P(2) = 2.5e-72
Identities = 117/305 (38%), Positives = 165/305 (54%)
Query: 455 LREYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTIAMLAHLACEKGIWGPHLIVVPTS 514
LREYQ GL+WL+ + R N ILADEMGLGKTI +I L + GI GP LI+ P S
Sbjct: 386 LREYQLEGLNWLLFNWYNRRNCILADEMGLGKTIQSITFLYEILLT-GIRGPFLIIAPLS 444
Query: 515 VMLNWETEFLKWCPAFKILTYFGSAKERK--------FK-RQGWLKPNS--FHVCITTYR 563
+ NWE EF W ++ Y GS R+ F+ QG + + F ITT+
Sbjct: 445 TIANWEREFRTWTD-INVVVYHGSLISRQMIQQYEMYFRDSQGRIIRGAYRFQAIITTFE 503
Query: 564 LIIQDSKVFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPLQNDLMELW 623
+I+ +W+ +I+DEAH +KN + + L N + ++LLTGTPLQN + EL+
Sbjct: 504 MILGGCGELNAIEWRCVIIDEAHRLKNKNCKLLEGLKLMNLEHKVLLTGTPLQNTVEELF 563
Query: 624 SLMHFLMPHIFQSHQEFKDWFCNPISGMVEGQEKVNKEVVDRLHNVLRPFILRRLKRDVE 683
SL+HFL P F S F F G ++ +E+V K L +L+P +LRRLK DVE
Sbjct: 564 SLLHFLEPLRFPSESTFMQEF-----GDLKTEEQVQK-----LQAILKPMMLRRLKEDVE 613
Query: 684 KQLPMKQEHVIYCRLSKRQRNLYEDFIAS--SETQATLASANFFGMISVIMQLRKVCNHP 741
K+L K+E +I L+ Q+ Y + S N +++ +M+LRK CNHP
Sbjct: 614 KKLAPKEETIIEVELTNIQKKYYRAILEKNFSFLSKGAGQTNVPNLVNTMMELRKCCNHP 673
Query: 742 DLFEG 746
L +G
Sbjct: 674 YLIKG 678
Score = 365 (133.5 bits), Expect = 2.5e-72, Sum P(2) = 2.5e-72
Identities = 74/158 (46%), Positives = 104/158 (65%)
Query: 990 LIQFDCGKLQELAILLRKLKSDGHRALIFTQMTKMLDILEEFISLYGYTYMRLDGSTQPE 1049
+IQ GKL + LL K+K+ GH+ LIF+QM + LDILE+++ Y Y R+DG +
Sbjct: 703 MIQ-SAGKLVLIDKLLPKMKAGGHKVLIFSQMVRCLDILEDYLIHKRYLYERIDGRVRGN 761
Query: 1050 ERQTLMQRFNT-NPKIFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQDRCHRI 1108
RQ + RF+ + F+F+L TR+GG+GINL ADT I +DSDWNP D QAQ RCHRI
Sbjct: 762 LRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRI 821
Query: 1109 GQTREVHIYRLISESTIEENILKKANQKRALDDLVIQS 1146
GQ + V +YRL++ ++ E + +A+ K LD V+QS
Sbjct: 822 GQNKAVKVYRLVTRNSYEREMFDRASLKLGLDKAVLQS 859
Score = 44 (20.5 bits), Expect = 1.5e-38, Sum P(2) = 1.5e-38
Identities = 28/116 (24%), Positives = 48/116 (41%)
Query: 1580 NVWSRD-CVPSPDVWLPQEDAILCAVVHEYGPNWSLVSDILYGMTASGYYRGRYRHPVHC 1638
N+ + D C+ W PQ D A H G N ++ +Y + R Y +
Sbjct: 792 NLTAADTCIIFDSDWNPQNDLQAQARCHRIGQNKAVK---VYRLVT----RNSYEREMFD 844
Query: 1639 CERFRELIQRYILSVPDNSINEKTSNVGSGKALLKVT-EDNVRTLLNVAAEQEDNE 1693
+ + + +L S++ + SNVG + L K ED +R A +E++E
Sbjct: 845 RASLKLGLDKAVLQ----SMSGRESNVGGIQQLSKKEIEDLLRRGAYGAIMEEEDE 896
>POMBASE|SPAC25A8.01c [details] [associations]
symbol:fft3 "fun thirty related protein Fft3"
species:4896 "Schizosaccharomyces pombe" [GO:0000790 "nuclear
chromatin" evidence=IDA] [GO:0003677 "DNA binding" evidence=ISM]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=ISM]
[GO:0005634 "nucleus" evidence=IDA] [GO:0006338 "chromatin
remodeling" evidence=ISS] [GO:0008094 "DNA-dependent ATPase
activity" evidence=IDA] [GO:0032017 "positive regulation of Ran
protein signal transduction" evidence=IGI] InterPro:IPR000330
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 PomBase:SPAC25A8.01c GO:GO:0005524 EMBL:CU329670
GO:GO:0003677 GO:GO:0006338 GO:GO:0000790 GO:GO:0004386
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0016585 GO:GO:0008094 OrthoDB:EOG4BCHW4 EMBL:AB027947
PIR:T38371 RefSeq:NP_593617.1 ProteinModelPortal:O42861
STRING:O42861 EnsemblFungi:SPAC25A8.01c.1 GeneID:2541531
KEGG:spo:SPAC25A8.01c HOGENOM:HOG000195581 OMA:NRASERY
NextBio:20802628 GO:GO:0032017 Uniprot:O42861
Length = 922
Score = 512 (185.3 bits), Expect = 2.8e-72, Sum P(3) = 2.8e-72
Identities = 126/333 (37%), Positives = 186/333 (55%)
Query: 433 PTGITFSTTQVRTKFPFLLKFPLREYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTIA 492
P +F TT + P + L++YQ IG++WL +YE +L GILADEMGLGKT TIA
Sbjct: 368 PANSSFITTPPASFSPDI---KLQDYQIIGINWLYLLYELKLAGILADEMGLGKTCQTIA 424
Query: 493 MLAHLACEKGIWGPHLIVVPTSVMLNWETEFLKWCPAFKILTYFGSAKERKFKRQGWLKP 552
+ L +K I GPHL++ P S M NW EF K+CP KI Y+GS ER+ R+ +
Sbjct: 425 FFS-LLMDKNINGPHLVIAPASTMENWLREFAKFCPKLKIELYYGSQVEREEIRER-INS 482
Query: 553 N--SFHVCITTYRLIIQDS--KVFKR-KKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRR 607
N S++V +TTYRL ++F R +K+ + DE H +KN S+R++ L++ + R
Sbjct: 483 NKDSYNVMLTTYRLAATSKADRLFLRNQKFNVCVYDEGHYLKNRASERYRHLMSIPADFR 542
Query: 608 ILLTGTPLQNDLMELWSLMHFLMPHIFQSHQEFKDWFCNPISGMVEGQEK--VNKEVVDR 665
+LLTGTPLQN+L EL SL+ F++PH+F + D E+ ++++ V R
Sbjct: 543 VLLTGTPLQNNLKELISLLAFILPHVFDYGLKSLDVIFTMKKSPESDFERALLSEQRVSR 602
Query: 666 LHNVLRPFILRRLKRDVEKQLPMKQEHVIYCRLSKRQRNLYEDFIASSETQATL------ 719
++ PF+LRR K V LP K + +C S+ +R Y+DF + + L
Sbjct: 603 AKMMMAPFVLRRKKSQVLDALPKKTRIIEFCEFSEEERRRYDDFASKQSVNSLLDENVMK 662
Query: 720 ----ASANFFGMIS----VIMQLRKVCNHPDLF 744
+AN S V++QLRK+ +HP LF
Sbjct: 663 TNLDTNANLAKKKSTAGFVLVQLRKLADHPMLF 695
Score = 321 (118.1 bits), Expect = 2.8e-72, Sum P(3) = 2.8e-72
Identities = 65/147 (44%), Positives = 97/147 (65%)
Query: 994 DCGKLQELAILLRKLKSDGHRALIFTQMTKMLDILEEFISLYGYTYMRLDGSTQPEERQT 1053
D K+++L LL +G R ++F+Q T++LDIL+ + ++R DGSTQ + RQ
Sbjct: 759 DATKVRKLKKLLTNAVENGDRVVLFSQFTQVLDILQLVMKSLNLKFLRFDGSTQVDFRQD 818
Query: 1054 LMQRFNTNPKIFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQDRCHRIGQTRE 1113
L+ +F + I +F+LST++GG GINL A+ VI YD +NP D QA+DR HR+GQ +E
Sbjct: 819 LIDQFYADESINVFLLSTKAGGFGINLACANMVILYDVSFNPFDDLQAEDRAHRVGQKKE 878
Query: 1114 VHIYRLISESTIEENILKKANQKRALD 1140
V +Y+ + + TIEE+I + AN K ALD
Sbjct: 879 VTVYKFVVKDTIEEHIQRLANAKIALD 905
Score = 38 (18.4 bits), Expect = 2.8e-72, Sum P(3) = 2.8e-72
Identities = 10/34 (29%), Positives = 19/34 (55%)
Query: 236 SLVRRCDEINGGLS--ISENHLLDIETSQVRDTS 267
+L+R+C+++ G + I L + TS +TS
Sbjct: 322 ALIRQCEQLGGKIQRGIEAWGLSNTATSDEGETS 355
Score = 37 (18.1 bits), Expect = 1.4e-42, Sum P(3) = 1.4e-42
Identities = 9/31 (29%), Positives = 17/31 (54%)
Query: 1116 IYRLISESTIEENILKKANQKRALDDLVIQS 1146
I R ++++ + E KKAN+ +D+ S
Sbjct: 703 ILRQMAKAIMNEPQYKKANELYIFEDMQYMS 733
>UNIPROTKB|J9NZH0 [details] [associations]
symbol:SMARCA1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005634 "nucleus" evidence=IEA]
[GO:0043044 "ATP-dependent chromatin remodeling" evidence=IEA]
[GO:0031491 "nucleosome binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR009057 InterPro:IPR015194 InterPro:IPR015195
Pfam:PF00176 Pfam:PF00271 Pfam:PF09110 Pfam:PF09111 PROSITE:PS51194
SMART:SM00490 SMART:SM00717 GO:GO:0005524 GO:GO:0003677
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0016585 GO:GO:0031491 GO:GO:0043044
GeneTree:ENSGT00680000100002 SUPFAM:SSF101224 EMBL:AAEX03026896
Ensembl:ENSCAFT00000048721 Uniprot:J9NZH0
Length = 850
Score = 529 (191.3 bits), Expect = 3.1e-72, Sum P(2) = 3.1e-72
Identities = 107/259 (41%), Positives = 161/259 (62%)
Query: 483 GLGKTIMTIAMLAHLACEKGIWGPHLIVVPTSVMLNWETEFLKWCPAFKILTYFGSAKER 542
GLGKT+ TIA+L +L + I GPH+++VP S + NW EF +W P+ +++ + G R
Sbjct: 3 GLGKTLQTIALLGYLKHYRNIPGPHMVLVPKSTLYNWMNEFKRWVPSLRVICFVGDKDAR 62
Query: 543 KFKRQGWLKPNSFHVCITTYRLIIQDSKVFKRKKWKYLILDEAHLIKNWKSQRWQTLLNF 602
+ + P + VC+T+Y ++I++ VFK+ W+YL++DEAH IKN KS+ + + F
Sbjct: 63 AAFIRDEMMPGEWDVCVTSYEMVIKEKSVFKKFHWRYLVIDEAHRIKNEKSKLSEIVREF 122
Query: 603 NSKRRILLTGTPLQNDLMELWSLMHFLMPHIFQSHQEFKDWFCNPISGMVEGQEKVNKEV 662
S R+LLTGTPLQN+L ELW+L++FL+P +F S +F WF + G +K+
Sbjct: 123 KSTNRLLLTGTPLQNNLHELWALLNFLLPDVFNSADDFDSWF--DTKNCL-GDQKL---- 175
Query: 663 VDRLHNVLRPFILRRLKRDVEKQLPMKQEHVIYCRLSKRQRNLYEDFIASSETQATLASA 722
V+RLH VL+PF+LRR+K DVEK LP K+E +Y LSK QR + + ++
Sbjct: 176 VERLHAVLKPFLLRRIKTDVEKSLPPKKEIKVYLGLSKMQREWFVILAFFISENSNNSNK 235
Query: 723 NF-FGMISVIMQLR--KVC 738
N +++VIM LR K C
Sbjct: 236 NHKLDILNVIMLLREAKCC 254
Score = 288 (106.4 bits), Expect = 3.1e-72, Sum P(2) = 3.1e-72
Identities = 60/139 (43%), Positives = 85/139 (61%)
Query: 1025 LDILEEFISLYGYTYMRLDGSTQPEERQTLMQRFNT-NPKIFLFILSTRSGGVGINLVGA 1083
L L ++ Y Y + G ++ ++ FN N F+F+LSTR+GG+GINL A
Sbjct: 307 LSALPDYEHWPSYFYRSISGQYLFVYKKEAIEAFNAPNSSKFIFMLSTRAGGLGINLASA 366
Query: 1084 DTVIFYDSDWNPAMDQQAQDRCHRIGQTREVHIYRLISESTIEENILKKANQKRALDDLV 1143
D VI YDSDWNP +D QA DR HRIGQ + V ++RLI+++T+EE I+++A K LD +V
Sbjct: 367 DVVILYDSDWNPQVDLQAMDRAHRIGQKKPVRVFRLITDNTVEERIVERAEIKLRLDSIV 426
Query: 1144 IQSGGYNTEFFKKLDPMEL 1162
IQ G + KL E+
Sbjct: 427 IQQGRLIDQQSNKLAKEEM 445
>RGD|620696 [details] [associations]
symbol:Chd8 "chromodomain helicase DNA binding protein 8"
species:10116 "Rattus norvegicus" [GO:0001701 "in utero embryonic
development" evidence=IEA;ISO] [GO:0002039 "p53 binding"
evidence=ISO;ISS] [GO:0003677 "DNA binding" evidence=ISO;ISS]
[GO:0003678 "DNA helicase activity" evidence=ISO;ISS] [GO:0005515
"protein binding" evidence=IPI] [GO:0005524 "ATP binding"
evidence=ISO;ISS] [GO:0005634 "nucleus" evidence=ISO;IDA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0008013 "beta-catenin binding" evidence=ISO;IDA] [GO:0008094
"DNA-dependent ATPase activity" evidence=ISO;ISS] [GO:0030178
"negative regulation of Wnt receptor signaling pathway"
evidence=ISO;IDA] [GO:0032508 "DNA duplex unwinding" evidence=ISO]
[GO:0035064 "methylated histone residue binding" evidence=ISO;ISS]
[GO:0042393 "histone binding" evidence=ISO;ISS] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=ISO;ISS] [GO:0043066
"negative regulation of apoptotic process" evidence=ISO;ISS]
[GO:0043234 "protein complex" evidence=ISO;IDA] [GO:0045892
"negative regulation of transcription, DNA-dependent"
evidence=ISO;IDA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISO;ISS] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=ISO;ISS] [GO:0045945 "positive regulation of
transcription from RNA polymerase III promoter" evidence=ISO;ISS]
[GO:0060070 "canonical Wnt receptor signaling pathway"
evidence=ISO;IDA] [GO:0070016 "armadillo repeat domain binding"
evidence=IPI] [GO:0071339 "MLL1 complex" evidence=ISO;ISS]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271 Pfam:PF07533
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298
SMART:SM00490 SMART:SM00592 Pfam:PF00385 RGD:620696 GO:GO:0005524
GO:GO:0045892 GO:GO:0043066 GO:GO:0003677 GO:GO:0001701
GO:GO:0045944 GO:GO:0006351 GO:GO:0035064 GO:GO:0008013
GO:GO:0045945 GO:GO:0030178 GO:GO:0060070 InterPro:IPR016197
SUPFAM:SSF54160 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0003678 GO:GO:0043044 GO:GO:0071339
GO:GO:0002039 EMBL:CH474040 InterPro:IPR023780 PROSITE:PS00598
GO:GO:0008094 HOGENOM:HOG000246942 GeneTree:ENSGT00560000077077
HOVERGEN:HBG107676 OrthoDB:EOG4ZPDTC CTD:57680 KO:K04494
EMBL:AF169825 IPI:IPI00201110 IPI:IPI00923717 RefSeq:NP_075222.2
UniGene:Rn.98337 STRING:Q9JIX5 PhosphoSite:Q9JIX5 PRIDE:Q9JIX5
Ensembl:ENSRNOT00000022593 GeneID:65027 KEGG:rno:65027
UCSC:RGD:620696 NextBio:613802 Genevestigator:Q9JIX5 Uniprot:Q9JIX5
Length = 2581
Score = 490 (177.5 bits), Expect = 4.1e-72, Sum P(4) = 4.1e-72
Identities = 119/306 (38%), Positives = 172/306 (56%)
Query: 455 LREYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTIAMLAHLACEKGIWGPHLIVVPTS 514
LREYQ G++WL+ + R N ILADEMGLGKTI +IA L + GI GP L++ P S
Sbjct: 811 LREYQLEGVNWLLFNWYNRQNCILADEMGLGKTIQSIAFLQEVY-NVGIHGPFLVIAPLS 869
Query: 515 VMLNWETEFLKWCPAFKILTYFGSAKERKFKRQ---------GWLKPNS--FHVCITTYR 563
+ NWE EF W + Y GS R+ +Q G L P + F ITT+
Sbjct: 870 TITNWEREFNTWTE-MNTIVYHGSLASRQMIQQYEMYCKDSRGRLIPGAYKFDALITTFE 928
Query: 564 LIIQDSKVFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPLQNDLMELW 623
+I+ D + +W+ +I+DEAH +KN + +L + + + ++LLTGTPLQN + EL+
Sbjct: 929 MILSDCPELREIEWRCVIIDEAHRLKNRNCKLLDSLKHMDLEHKVLLTGTPLQNTVEELF 988
Query: 624 SLMHFLMPHIFQSHQEF-KDWFCNPISGMVEGQEKVNKEVVDRLHNVLRPFILRRLKRDV 682
SL+HFL P F S EF KD+ G ++ +E+V K L +L+P +LRRLK DV
Sbjct: 989 SLLHFLEPSQFPSESEFLKDF------GDLKTEEQVQK-----LQAILKPMMLRRLKEDV 1037
Query: 683 EKQLPMKQEHVIYCRLSKRQRNLYEDFIASSETQATLASA--NFFGMISVIMQLRKVCNH 740
EK L KQE +I L+ Q+ Y + + + + + N +++ +M+LRK CNH
Sbjct: 1038 EKNLAPKQETIIEVELTNIQKKYYRAILEKNFSFLSKGAGHTNMPNLLNTMMELRKCCNH 1097
Query: 741 PDLFEG 746
P L G
Sbjct: 1098 PYLING 1103
Score = 371 (135.7 bits), Expect = 4.1e-72, Sum P(4) = 4.1e-72
Identities = 75/152 (49%), Positives = 102/152 (67%)
Query: 996 GKLQELAILLRKLKSDGHRALIFTQMTKMLDILEEFISLYGYTYMRLDGSTQPEERQTLM 1055
GKL + LL KLK+ GH+ LIF+QM + LDILE+++ Y Y R+DG + RQ +
Sbjct: 1133 GKLVLIDKLLPKLKAGGHKVLIFSQMVRCLDILEDYLIQRRYLYERIDGRVRGNLRQAAI 1192
Query: 1056 QRFNT-NPKIFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQDRCHRIGQTREV 1114
RF+ + F+F+L TR+GG+GINL ADT I +DSDWNP D QAQ RCHRIGQ++ V
Sbjct: 1193 DRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAV 1252
Query: 1115 HIYRLISESTIEENILKKANQKRALDDLVIQS 1146
+YRLI+ ++ E + KA+ K LD V+QS
Sbjct: 1253 KVYRLITRNSYEREMFDKASLKLGLDKAVLQS 1284
Score = 51 (23.0 bits), Expect = 4.1e-72, Sum P(4) = 4.1e-72
Identities = 13/46 (28%), Positives = 22/46 (47%)
Query: 1453 SVEPMSIDDDFYDEDATFSDAMSPPSTSQKKRKKAELALYDDEERE 1498
SV P+ ++DD D D+ + PS+S + + D+ E E
Sbjct: 2056 SVPPVKLEDDD-DSDSELDLSKLSPSSSSSSSSSSSSSSSDESEDE 2100
Score = 44 (20.5 bits), Expect = 2.9e-70, Sum P(5) = 2.9e-70
Identities = 20/78 (25%), Positives = 33/78 (42%)
Query: 1891 LSDSVKCPKSKLRKTSMEHSEIQHSSPEPVSNQSVATKDANLRFDLIQEAWLEDM--DGG 1948
LS SV P KL SE+ S P S+ S ++ ++ D ++ E + D
Sbjct: 2053 LSRSV--PPVKLEDDDDSDSELDLSKLSPSSSSSSSSSSSSSSSDESEDEKEEKLTADRS 2110
Query: 1949 RLSCMDQDLSLETVLSSE 1966
R D++ L +S +
Sbjct: 2111 RPKLYDEESLLSLTMSQD 2128
Score = 40 (19.1 bits), Expect = 2.9e-70, Sum P(5) = 2.9e-70
Identities = 10/42 (23%), Positives = 26/42 (61%)
Query: 1513 PVRSPDSDSKLSRKRHDGSTELKTCESIFIDLEQKSASRSKM 1554
P+R PD ++ S + + + ++ + +S+ + LE + +RS++
Sbjct: 1998 PLR-PDVPAEKSPE--ENAVQVPSLDSLTLKLEDEVVARSRL 2036
Score = 39 (18.8 bits), Expect = 4.7e-36, Sum P(5) = 4.7e-36
Identities = 7/14 (50%), Positives = 10/14 (71%)
Query: 892 DILQQKTVRRSYLY 905
DIL+ ++R YLY
Sbjct: 1163 DILEDYLIQRRYLY 1176
Score = 38 (18.4 bits), Expect = 4.1e-72, Sum P(4) = 4.1e-72
Identities = 9/20 (45%), Positives = 12/20 (60%)
Query: 1223 FTEEAVGRPEDDELVIEDTV 1242
F E+A GRP+D + E V
Sbjct: 1656 FLEKA-GRPDDKAIAAEHRV 1674
Score = 37 (18.1 bits), Expect = 5.9e-70, Sum P(5) = 5.9e-70
Identities = 8/24 (33%), Positives = 13/24 (54%)
Query: 1725 NGLYLGGSFFSSVTQTSCKSTREP 1748
+G L G+ V+QT C ++P
Sbjct: 1930 DGELLRGAARHGVSQTDCNIMQDP 1953
Score = 37 (18.1 bits), Expect = 2.5e-23, Sum P(5) = 2.5e-23
Identities = 8/25 (32%), Positives = 14/25 (56%)
Query: 799 SDELNAIATPASLIKERADLNNLEE 823
+ E+ A+++PAS A +EE
Sbjct: 424 ASEVAALSSPASCAPHTAGKTGMEE 448
>UNIPROTKB|Q9P2D1 [details] [associations]
symbol:CHD7 "Chromodomain-helicase-DNA-binding protein 7"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0007512 "adult heart development" evidence=IEA] [GO:0007605
"sensory perception of sound" evidence=IEA] [GO:0007628 "adult
walking behavior" evidence=IEA] [GO:0008015 "blood circulation"
evidence=IEA] [GO:0030540 "female genitalia development"
evidence=IEA] [GO:0035116 "embryonic hindlimb morphogenesis"
evidence=IEA] [GO:0040018 "positive regulation of multicellular
organism growth" evidence=IEA] [GO:0048752 "semicircular canal
morphogenesis" evidence=IEA] [GO:0048844 "artery morphogenesis"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA;TAS] [GO:0005515
"protein binding" evidence=IPI] [GO:0001701 "in utero embryonic
development" evidence=IMP] [GO:0003007 "heart morphogenesis"
evidence=IMP] [GO:0042472 "inner ear morphogenesis" evidence=IMP]
[GO:0043584 "nose development" evidence=IMP] [GO:0048806 "genitalia
development" evidence=IMP] [GO:0060021 "palate development"
evidence=IMP] [GO:0060041 "retina development in camera-type eye"
evidence=IMP] [GO:0001501 "skeletal system development"
evidence=IMP] [GO:0050890 "cognition" evidence=IMP] [GO:0007417
"central nervous system development" evidence=IMP] [GO:0021545
"cranial nerve development" evidence=IMP] [GO:0060123 "regulation
of growth hormone secretion" evidence=IMP] [GO:0003682 "chromatin
binding" evidence=TAS] [GO:0030217 "T cell differentiation"
evidence=IMP] [GO:0060173 "limb development" evidence=IMP]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=NAS] [GO:0060324 "face development" evidence=IMP]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001005
InterPro:IPR001650 InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271
Pfam:PF07533 PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 SMART:SM00592 SMART:SM00717
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0003677 GO:GO:0008015 GO:GO:0003007 GO:GO:0050890
GO:GO:0001701 GO:GO:0040018 GO:GO:0007417 GO:GO:0006351
GO:GO:0003682 GO:GO:0016568 GO:GO:0048806 GO:GO:0042472
GO:GO:0001501 GO:GO:0060041 GO:GO:0007605 GO:GO:0007512
GO:GO:0004386 GO:GO:0035116 GO:GO:0060324 GO:GO:0060021
GO:GO:0060173 GO:GO:0048844 InterPro:IPR016197 SUPFAM:SSF54160
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0030540 GO:GO:0007628 GO:GO:0030217 GO:GO:0048752
InterPro:IPR023780 PROSITE:PS00598 HOVERGEN:HBG081150 CTD:55636
KO:K14437 OrthoDB:EOG4MCWZD EMBL:AC023102 EMBL:AC113143
EMBL:AB037837 EMBL:AK000364 EMBL:AK000368 EMBL:BC014681
EMBL:BC051264 EMBL:BC053890 EMBL:BC068000 EMBL:BC080627
EMBL:BC110818 IPI:IPI00472901 IPI:IPI00794880 RefSeq:NP_060250.2
UniGene:Hs.20395 UniGene:Hs.733236 PDB:2CKC PDB:2V0E PDB:2V0F
PDBsum:2CKC PDBsum:2V0E PDBsum:2V0F ProteinModelPortal:Q9P2D1
SMR:Q9P2D1 DIP:DIP-48685N IntAct:Q9P2D1 STRING:Q9P2D1
PhosphoSite:Q9P2D1 DMDM:148877246 PaxDb:Q9P2D1 PRIDE:Q9P2D1
Ensembl:ENST00000307121 Ensembl:ENST00000423902
Ensembl:ENST00000525508 GeneID:55636 KEGG:hsa:55636 UCSC:uc003xue.3
GeneCards:GC08P061642 H-InvDB:HIX0007533 HGNC:HGNC:20626 MIM:214800
MIM:608765 MIM:608892 MIM:612370 neXtProt:NX_Q9P2D1 Orphanet:138
Orphanet:478 Orphanet:432 PharmGKB:PA134948695 InParanoid:Q9P2D1
OMA:TFGVIFD EvolutionaryTrace:Q9P2D1 GenomeRNAi:55636 NextBio:60291
ArrayExpress:Q9P2D1 Bgee:Q9P2D1 CleanEx:HS_CHD7
Genevestigator:Q9P2D1 GermOnline:ENSG00000171316 GO:GO:0021545
GO:GO:0043584 GO:GO:0060123 Uniprot:Q9P2D1
Length = 2997
Score = 483 (175.1 bits), Expect = 4.2e-72, Sum P(5) = 4.2e-72
Identities = 118/305 (38%), Positives = 168/305 (55%)
Query: 455 LREYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTIAMLAHLACEKGIWGPHLIVVPTS 514
LREYQ G++WL+ + N ILADEMGLGKTI +I L + KGI GP L++ P S
Sbjct: 968 LREYQLEGVNWLLFNWYNMRNCILADEMGLGKTIQSITFLYEIYL-KGIHGPFLVIAPLS 1026
Query: 515 VMLNWETEFLKWCPAFKILTYFGSAKERK--------FKR-QGWLKPNS--FHVCITTYR 563
+ NWE EF W ++ Y GS R+ FK QG + S FH ITT+
Sbjct: 1027 TIPNWEREFRTWTE-LNVVVYHGSQASRRTIQLYEMYFKDPQGRVIKGSYKFHAIITTFE 1085
Query: 564 LIIQDSKVFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPLQNDLMELW 623
+I+ D + W+ +++DEAH +KN + + L + + ++LLTGTPLQN + EL+
Sbjct: 1086 MILTDCPELRNIPWRCVVIDEAHRLKNRNCKLLEGLKMMDLEHKVLLTGTPLQNTVEELF 1145
Query: 624 SLMHFLMPHIFQSHQEFKDWFCNPISGMVEGQEKVNKEVVDRLHNVLRPFILRRLKRDVE 683
SL+HFL P F S F F G ++ +E+V K L +L+P +LRRLK DVE
Sbjct: 1146 SLLHFLEPSRFPSETTFMQEF-----GDLKTEEQVQK-----LQAILKPMMLRRLKEDVE 1195
Query: 684 KQLPMKQEHVIYCRLSKRQRNLYEDFIASSETQATLAS--ANFFGMISVIMQLRKVCNHP 741
K L K+E +I L+ Q+ Y + + T + AN +++ +M+LRK CNHP
Sbjct: 1196 KNLAPKEETIIEVELTNIQKKYYRAILEKNFTFLSKGGGQANVPNLLNTMMELRKCCNHP 1255
Query: 742 DLFEG 746
L G
Sbjct: 1256 YLING 1260
Score = 377 (137.8 bits), Expect = 4.2e-72, Sum P(5) = 4.2e-72
Identities = 80/163 (49%), Positives = 107/163 (65%)
Query: 985 FPDRRLIQFDCGKLQELAILLRKLKSDGHRALIFTQMTKMLDILEEFISLYGYTYMRLDG 1044
F + +IQ GKL + LL KLK+ GHR LIF+QM + LDILE+++ Y Y R+DG
Sbjct: 1280 FQLQAMIQA-AGKLVLIDKLLPKLKAGGHRVLIFSQMVRCLDILEDYLIQRRYPYERIDG 1338
Query: 1045 STQPEERQTLMQRFNT-NPKIFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQD 1103
+ RQ + RF+ + F+F+L TR+GG+GINL ADT I +DSDWNP D QAQ
Sbjct: 1339 RVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQA 1398
Query: 1104 RCHRIGQTREVHIYRLISESTIEENILKKANQKRALDDLVIQS 1146
RCHRIGQ++ V IYRLI+ ++ E + KA+ K LD V+QS
Sbjct: 1399 RCHRIGQSKSVKIYRLITRNSYEREMFDKASLKLGLDKAVLQS 1441
Score = 58 (25.5 bits), Expect = 4.2e-72, Sum P(5) = 4.2e-72
Identities = 30/117 (25%), Positives = 48/117 (41%)
Query: 1160 MELFSGHRTLPMKTMQKEKAINNGNEVSLSNADVEAALKCVEDEADYMA--LKRAEQEEA 1217
+E G P KEK E + E+ +C E EA + LK E
Sbjct: 2168 LEQAEGKVEEPENPAAKEKCEGKEEEEETDGSGKESKQEC-EAEASSVKNELKGVEVGAD 2226
Query: 1218 VDNQEFTEEAVGRPEDDELVIEDTVRTDEPTD-QGGCMTA--NND---NGMMLTGND 1268
++ +E+ G ED+E +ED +++E + + G ++ N D N M T D
Sbjct: 2227 TGSKSISEK--GSEEDEEEKLEDDDKSEESSQPEAGAVSRGKNFDEESNASMSTARD 2281
Score = 45 (20.9 bits), Expect = 4.2e-72, Sum P(5) = 4.2e-72
Identities = 11/49 (22%), Positives = 24/49 (48%)
Query: 90 PMREQPGIQYKEADENGAEEPGVQSKEADEDDAE-----QHSGFEPQLD 133
P++ PG+ ++ + + +P Q + ++ + QHS EP L+
Sbjct: 516 PLQPHPGLHHQSSPPHPHHQPWAQLHPSPQNTPQKVPVHQHSPSEPFLE 564
Score = 42 (19.8 bits), Expect = 4.2e-72, Sum P(5) = 4.2e-72
Identities = 9/26 (34%), Positives = 14/26 (53%)
Query: 193 DKVGRESSAEMGEDEAEPTVVEEGHV 218
D GR+S + + E + +V EG V
Sbjct: 776 DAAGRDSPSNTSQSEQQESVDAEGPV 801
Score = 39 (18.8 bits), Expect = 2.3e-36, Sum P(4) = 2.3e-36
Identities = 15/51 (29%), Positives = 22/51 (43%)
Query: 1580 NVWSRD-CVPSPDVWLPQEDAILCAVVHEYGPNWSLVSDILYGMTASGYYR 1629
N+ + D C+ W PQ D A H G + S+ I +T + Y R
Sbjct: 1374 NLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKSV--KIYRLITRNSYER 1422
Score = 39 (18.8 bits), Expect = 1.4e-27, Sum P(3) = 1.4e-27
Identities = 5/20 (25%), Positives = 11/20 (55%)
Query: 503 IWGPHLIVVPTSVMLNWETE 522
+WGP + VP + ++ +
Sbjct: 144 MWGPRAVQVPDQIRAPYQQQ 163
>FB|FBgn0023395 [details] [associations]
symbol:Chd3 "Chd3" species:7227 "Drosophila melanogaster"
[GO:0006333 "chromatin assembly or disassembly" evidence=ISS;NAS]
[GO:0004003 "ATP-dependent DNA helicase activity" evidence=ISS]
[GO:0003682 "chromatin binding" evidence=ISS] [GO:0004386 "helicase
activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
InterPro:IPR001965 InterPro:IPR002464 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 PROSITE:PS00690
PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 EMBL:AE014296 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0006351 GO:GO:0006333
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 GO:GO:0004386 InterPro:IPR019786 PROSITE:PS01359
InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR023780 PROSITE:PS00598 GeneTree:ENSGT00560000076896
InterPro:IPR009463 Pfam:PF06465 EMBL:AY071503 EMBL:AF007780
RefSeq:NP_649111.1 ProteinModelPortal:O16102 SMR:O16102
DIP:DIP-21327N MINT:MINT-1651376 STRING:O16102 PaxDb:O16102
EnsemblMetazoa:FBtr0074998 GeneID:40111 KEGG:dme:Dmel_CG9594
UCSC:CG9594-RA CTD:1107 FlyBase:FBgn0023395 InParanoid:O16102
OMA:IKWRDLA OrthoDB:EOG4JH9WN PhylomeDB:O16102 GenomeRNAi:40111
NextBio:817050 Bgee:O16102 GermOnline:CG9594 Uniprot:O16102
Length = 892
Score = 421 (153.3 bits), Expect = 4.3e-72, Sum P(2) = 4.3e-72
Identities = 111/329 (33%), Positives = 164/329 (49%)
Query: 448 PFLLK---FPLREYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTIAMLAHLACEKGIW 504
P LK L +Q G+ WL + + + ILADEMGLGKTI T+ L L E
Sbjct: 257 PVFLKEAGLKLHPFQIEGVSWLRYSWGQGIPTILADEMGLGKTIQTVVFLYSLFKEGHCR 316
Query: 505 GPHLIVVPTSVMLNWETEFLKWCPAFKILTYFGSAKERKFKRQG----------WLKPNS 554
GP LI VP S + NWE E W P +TY G R R+ ++ N
Sbjct: 317 GPFLISVPLSTLTNWERELELWAPELYCVTYVGGKTARAVIRKHEISFEEVTTKTMRENQ 376
Query: 555 ----FHVCITTYRLIIQDSKVFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILL 610
F+V +T+Y I D+ W L++DEAH +++ +S+ ++ L + ++LL
Sbjct: 377 TQYKFNVMLTSYEFISVDAAFLGCIDWAALVVDEAHRLRSNQSKFFRILSKYRIGYKLLL 436
Query: 611 TGTPLQNDLMELWSLMHFLMPHIFQSHQEFKDWFCNPISGMVEGQEKVNKEVVDRLHNVL 670
TGTPLQN+L EL+ L++FL F Q F+ F + V +E+V RLH +L
Sbjct: 437 TGTPLQNNLEELFHLLNFLSSGKFNDLQTFQAEFTD-----VSKEEQVK-----RLHEIL 486
Query: 671 RPFILRRLKRDVEKQLPMKQEHVIYCRLSKRQRNLYEDFIASS-ETQATLASANFFGMIS 729
P +LRRLK DV K +P K E ++ LS Q+ Y+ + + + +++
Sbjct: 487 EPHMLRRLKADVLKSMPPKSEFIVRVELSSMQKKFYKHILTKNFKALNQKGGGRVCSLLN 546
Query: 730 VIMQLRKVCNHPDLFEGRPIVSSFDMSGI 758
++M LRK CNHP LF ++ SG+
Sbjct: 547 IMMDLRKCCNHPYLFPSAAEEATISPSGL 575
Score = 403 (146.9 bits), Expect = 4.3e-72, Sum P(2) = 4.3e-72
Identities = 84/170 (49%), Positives = 118/170 (69%)
Query: 996 GKLQELAILLRKLKSDGHRALIFTQMTKMLDILEEFISLYGYTYMRLDGSTQPEERQTLM 1055
GKL L+ +L++LK+D HR L+F+QMTKML++LE F+ GY Y R+DGS + + RQ +
Sbjct: 586 GKLDLLSKMLKQLKADNHRVLLFSQMTKMLNVLEHFLEGEGYQYDRIDGSIKGDLRQKAI 645
Query: 1056 QRFNTNP--KIFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQDRCHRIGQTRE 1113
RFN +P + F+F+LSTR+GG+GINL ADTVI +DSDWNP D QA R HR+GQ ++
Sbjct: 646 DRFN-DPVSEHFVFLLSTRAGGLGINLATADTVIIFDSDWNPHNDVQAFSRAHRMGQKKK 704
Query: 1114 VHIYRLISESTIEENILKKANQKRALDDLVIQSG--GYNTEFFKKLDPME 1161
V IYR ++ +++EE I++ A K L LV++ G G T F K D +E
Sbjct: 705 VMIYRFVTHNSVEERIMQVAKHKMMLTHLVVRPGMGGMTTNFSK--DELE 752
>ASPGD|ASPL0000037473 [details] [associations]
symbol:AN2973 species:162425 "Emericella nidulans"
[GO:0000729 "DNA double-strand break processing" evidence=IEA]
[GO:0070870 "heterochromatin maintenance involved in chromatin
silencing" evidence=IEA] [GO:0030466 "chromatin silencing at silent
mating-type cassette" evidence=IEA] [GO:0043044 "ATP-dependent
chromatin remodeling" evidence=IEA] [GO:0000183 "chromatin
silencing at rDNA" evidence=IEA] [GO:0070869 "heterochromatin
assembly involved in chromatin silencing" evidence=IEA] [GO:0006348
"chromatin silencing at telomere" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0031934 "mating-type region heterochromatin" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0000775 "chromosome,
centromeric region" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0008094 "DNA-dependent ATPase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0003677 EMBL:BN001306 EMBL:AACD01000051
GO:GO:0004386 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 OrthoDB:EOG4BCHW4 KO:K14439 HOGENOM:HOG000195581
RefSeq:XP_660577.1 ProteinModelPortal:Q5B907
EnsemblFungi:CADANIAT00010107 GeneID:2874181 KEGG:ani:AN2973.2
OMA:QQVGINW Uniprot:Q5B907
Length = 1107
Score = 469 (170.2 bits), Expect = 5.1e-72, Sum P(2) = 5.1e-72
Identities = 108/297 (36%), Positives = 170/297 (57%)
Query: 455 LREYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTIAMLAHLACEKGIWGPHLIVVPTS 514
++ YQ +G++WL ++E L+ ILAD+MGLGKT IA LAHL EKGI GPHL+VVP+S
Sbjct: 564 MKNYQIVGINWLSLLFENELSCILADDMGLGKTCQVIAFLAHLY-EKGIKGPHLVVVPSS 622
Query: 515 VMLNWETEFLKWCPAFKILTYFGSAKER-KFKRQGWLKPNSFHVCITTYRLIIQ--DSKV 571
+ NW EF K+CP ++ Y+ R + + Q + +V ITTY + D+
Sbjct: 623 TIENWLREFQKFCPTLSVMPYYADQNVRAQIREQIEGNRDDINVVITTYTIAKGKVDAHF 682
Query: 572 FKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPLQNDLMELWSLMHFLMP 631
+ + + DE H++K+ S ++ L+ ++ R+LLTGTPLQN+L EL SL+ F++P
Sbjct: 683 LRNMDFCACVYDEGHMLKSSTSVLYEKLIRIRARFRLLLTGTPLQNNLQELASLLGFILP 742
Query: 632 HIFQSHQEFKDW-FCNPISGMVEGQEKV-NKEVVDRLHNVLRPFILRRLKRDVEKQLPMK 689
+FQ ++ + F N + E + + + ++R ++L+PF+LRR K V LP K
Sbjct: 743 KVFQERKDDLQYIFSNKAKTVDESHSALLSAQRIERAKSMLKPFVLRRKKHQVI-DLPAK 801
Query: 690 QEHVIYCRLSKRQRNLYEDFIASSETQATL---ASANFFGMIS--VIMQLRKVCNHP 741
V YC ++ QR +YE +E + L A+ G S ++M+LR+ HP
Sbjct: 802 ISRVEYCEMNAAQREIYEH--EKNEVKKLLEDRAAGKKTGNKSANILMKLRQAAIHP 856
Score = 357 (130.7 bits), Expect = 5.1e-72, Sum P(2) = 5.1e-72
Identities = 76/186 (40%), Positives = 113/186 (60%)
Query: 994 DCGKLQELAILLRKLKSDGHRALIFTQMTKMLDILEEFISLYGYTYMRLDGSTQPEERQT 1053
D GK+ +L LLR+ K +G R L+F+Q +DILE + ++RLDG+T E+RQ+
Sbjct: 924 DSGKVDKLCELLRRFKENGDRVLVFSQFRLAMDILEVVLENQHLKFVRLDGTTSVEDRQS 983
Query: 1054 LMQRFNTNPKIFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQDRCHRIGQTRE 1113
+M F+ N I +F+LST++GG GINL A+ VI +DS +NP D QA++R HR+GQTRE
Sbjct: 984 IMDTFHENTDIPVFLLSTKAGGAGINLACANKVIIFDSSFNPQEDVQAENRAHRVGQTRE 1043
Query: 1114 VHIYRLISESTIEENILKKANQKRALDDLVIQSGGYNTEFFKKLDPMELFSGHRTLPMKT 1173
V + RL+++ TIEE I K ALD V G ++ KK + + + +
Sbjct: 1044 VEVIRLVTKDTIEEQIYALGQTKLALDQAVAGEDGADS---KKSEEAGIKAVEEMFTAEI 1100
Query: 1174 MQKEKA 1179
QKE++
Sbjct: 1101 TQKERS 1106
>CGD|CAL0000801 [details] [associations]
symbol:orf19.1720 species:5476 "Candida albicans" [GO:0005575
"cellular_component" evidence=ND] [GO:0006312 "mitotic
recombination" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
CGD:CAL0000801 GO:GO:0005524 GO:GO:0003677 GO:GO:0004386
EMBL:AACQ01000014 EMBL:AACQ01000013 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 RefSeq:XP_721671.1
RefSeq:XP_721791.1 ProteinModelPortal:Q5AJ72 GeneID:3636620
GeneID:3636670 KEGG:cal:CaO19.1720 KEGG:cal:CaO19.9288
Uniprot:Q5AJ72
Length = 864
Score = 445 (161.7 bits), Expect = 6.9e-72, Sum P(3) = 6.9e-72
Identities = 100/300 (33%), Positives = 163/300 (54%)
Query: 455 LREYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTIAMLAHLACEKGIWGPHLIVVPTS 514
L++YQ GL+WL+T+++ LNGILADEMGLGKT+ I+ L+HL E GI GP L+VVP S
Sbjct: 175 LKDYQMDGLEWLITLFQNGLNGILADEMGLGKTLQCISFLSHLI-ENGINGPFLVVVPVS 233
Query: 515 VMLNWETEFLKWCPAFKILTYFGSAKERKFKRQGWLKPNSFHVCITTYRLIIQDSKVFKR 574
+ NW E K+ P K+ Y G+ +ER + + ++ +T+Y + I+D +
Sbjct: 234 TLSNWYNEIRKFAPKIKVTKYIGTKQERN-DIDLLQQQETTNIILTSYEISIRDFNKLVK 292
Query: 575 KKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPLQNDLMELWSLMHFLMPHIF 634
WKYLI+DE H +KN + + L N R+LLTGTPLQN+L ELWSL++F++P IF
Sbjct: 293 INWKYLIVDEGHRLKNSQCLLIKILKKLNVSNRLLLTGTPLQNNLNELWSLLNFILPDIF 352
Query: 635 QSHQEFKDWF----CNPISGMVEGQEKVNKEVVDRLHNV-LRPFILRRLKRDVEKQLPMK 689
+ F+ WF ++G +EG E L + ++ +++ L ++ + +
Sbjct: 353 HDLELFQQWFNFDELTELAGELEGTNNEEDEETKNLIKLNIQETLIKNLHTILKPFMLRR 412
Query: 690 QEHVIYCRLSKRQRNLYEDFIASSETQATLASAN---FFGMISVIMQLRKVCNHPDLFEG 746
+ + L ++ L + + + + N F ++ ++ NH +LF G
Sbjct: 413 LKRDVIKNLPPKKEYLLHIPMTKLQKKIYYDAVNDKLFDSLVETNLKAFIKFNHEELFNG 472
Score = 383 (139.9 bits), Expect = 6.9e-72, Sum P(3) = 6.9e-72
Identities = 93/240 (38%), Positives = 136/240 (56%)
Query: 997 KLQELAILLRKLKSDGHRALIFTQMTKMLDILEEFISLYGYTY---MRLDGSTQPEERQT 1053
K Q L LL L S GH+ LIF Q TK+LD+LE+++ ++ RLDGST + R
Sbjct: 612 KFQVLNQLLPPLLSSGHKVLIFAQFTKVLDLLEDWLEESPLSHGKICRLDGSTNHQIRDE 671
Query: 1054 LMQRFNTNPKIFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQDRCHRIGQTRE 1113
+ +FN NPK +F+ STR+GG+GINLV ADTVI D+DWNP MD QA DR HRIGQ
Sbjct: 672 QISQFNNNPKFKVFLSSTRAGGLGINLVAADTVILMDNDWNPQMDLQAIDRVHRIGQINP 731
Query: 1114 VHIYRLISESTIEENILKKANQKRALDDLVIQSGGYN-TEFFKKLDPMELFSGHRTLP-- 1170
V I+R + + +IEE ++ ++ KR L+ LVIQ G + + F KKL + +
Sbjct: 732 VKIFRFVIKDSIEEVLISRSGSKRFLERLVIQMGQFKFSNFNKKLTAATTSNEQGAIKND 791
Query: 1171 -----MKTMQKE--KAINNGNEVSLSNADVEAALKCVEDEADYMALKRAEQEEAVDNQEF 1223
M + K K+ NG + S +A+ + + + E D + + E ++D+ +F
Sbjct: 792 WSINDMMELSKIHFKSTQNG-QTSQDSAEEDEKILLSDQEIDELLDRSVECYNSIDDSKF 850
Score = 53 (23.7 bits), Expect = 1.6e-30, Sum P(3) = 1.6e-30
Identities = 16/70 (22%), Positives = 32/70 (45%)
Query: 687 PMKQEHVIYCRLSKRQRNLYEDFIASSETQATLASANFFGMISVIM-QLRKVCNHPDLFE 745
P E ++ R K + + + + + Q L A + ++ M QLR +CN P ++
Sbjct: 538 PSYDEALVKIRHIKSKTKI-QSILIDAIYQDILKEAKHLKLQNLKMIQLRNICNSPFIYY 596
Query: 746 GRPIVSSFDM 755
PI+ ++
Sbjct: 597 NYPILDQAEV 606
Score = 43 (20.2 bits), Expect = 1.7e-29, Sum P(3) = 1.7e-29
Identities = 10/23 (43%), Positives = 16/23 (69%)
Query: 577 WKYLILDEAHLIKNWKSQRWQTL 599
+ Y ILD+A +I+N S ++Q L
Sbjct: 596 YNYPILDQAEVIRN--SAKFQVL 616
Score = 42 (19.8 bits), Expect = 6.9e-72, Sum P(3) = 6.9e-72
Identities = 11/65 (16%), Positives = 35/65 (53%)
Query: 53 KKKALDKQLEFLLGQTERYSSMLAENLVDS--HKPVQQSPMREQPGIQYKEADENGAEEP 110
K K +++ L L+ +++ YS ++A+N++ + + +Q+ + + K +N ++
Sbjct: 53 KDKKMNR-LNKLIEKSQIYSQIIADNILQTSLERKEEQNNVAPPAPVPAKSDSKNESDTQ 111
Query: 111 GVQSK 115
++ +
Sbjct: 112 PIKKR 116
Score = 40 (19.1 bits), Expect = 7.8e-30, Sum P(2) = 7.8e-30
Identities = 9/24 (37%), Positives = 16/24 (66%)
Query: 897 KTVRRSYLYSSKLADIVL-SPVER 919
K + +S +YS +AD +L + +ER
Sbjct: 62 KLIEKSQIYSQIIADNILQTSLER 85
Score = 38 (18.4 bits), Expect = 1.8e-71, Sum P(3) = 1.8e-71
Identities = 11/43 (25%), Positives = 22/43 (51%)
Query: 52 RKKKALDKQLEFLLGQTERYSSMLAENLVDSHKPVQQSPMREQ 94
+++K K G+ + SML+ N+ DS K +++ + Q
Sbjct: 115 KRRKTKPKSKSTANGKQD-IVSMLSTNISDSTKSTREAIEKSQ 156
>UNIPROTKB|Q5AJ72 [details] [associations]
symbol:CaO19.1720 "Putative uncharacterized protein"
species:237561 "Candida albicans SC5314" [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR000330
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 CGD:CAL0000801 GO:GO:0005524 GO:GO:0003677
GO:GO:0004386 EMBL:AACQ01000014 EMBL:AACQ01000013 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 RefSeq:XP_721671.1
RefSeq:XP_721791.1 ProteinModelPortal:Q5AJ72 GeneID:3636620
GeneID:3636670 KEGG:cal:CaO19.1720 KEGG:cal:CaO19.9288
Uniprot:Q5AJ72
Length = 864
Score = 445 (161.7 bits), Expect = 6.9e-72, Sum P(3) = 6.9e-72
Identities = 100/300 (33%), Positives = 163/300 (54%)
Query: 455 LREYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTIAMLAHLACEKGIWGPHLIVVPTS 514
L++YQ GL+WL+T+++ LNGILADEMGLGKT+ I+ L+HL E GI GP L+VVP S
Sbjct: 175 LKDYQMDGLEWLITLFQNGLNGILADEMGLGKTLQCISFLSHLI-ENGINGPFLVVVPVS 233
Query: 515 VMLNWETEFLKWCPAFKILTYFGSAKERKFKRQGWLKPNSFHVCITTYRLIIQDSKVFKR 574
+ NW E K+ P K+ Y G+ +ER + + ++ +T+Y + I+D +
Sbjct: 234 TLSNWYNEIRKFAPKIKVTKYIGTKQERN-DIDLLQQQETTNIILTSYEISIRDFNKLVK 292
Query: 575 KKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPLQNDLMELWSLMHFLMPHIF 634
WKYLI+DE H +KN + + L N R+LLTGTPLQN+L ELWSL++F++P IF
Sbjct: 293 INWKYLIVDEGHRLKNSQCLLIKILKKLNVSNRLLLTGTPLQNNLNELWSLLNFILPDIF 352
Query: 635 QSHQEFKDWF----CNPISGMVEGQEKVNKEVVDRLHNV-LRPFILRRLKRDVEKQLPMK 689
+ F+ WF ++G +EG E L + ++ +++ L ++ + +
Sbjct: 353 HDLELFQQWFNFDELTELAGELEGTNNEEDEETKNLIKLNIQETLIKNLHTILKPFMLRR 412
Query: 690 QEHVIYCRLSKRQRNLYEDFIASSETQATLASAN---FFGMISVIMQLRKVCNHPDLFEG 746
+ + L ++ L + + + + N F ++ ++ NH +LF G
Sbjct: 413 LKRDVIKNLPPKKEYLLHIPMTKLQKKIYYDAVNDKLFDSLVETNLKAFIKFNHEELFNG 472
Score = 383 (139.9 bits), Expect = 6.9e-72, Sum P(3) = 6.9e-72
Identities = 93/240 (38%), Positives = 136/240 (56%)
Query: 997 KLQELAILLRKLKSDGHRALIFTQMTKMLDILEEFISLYGYTY---MRLDGSTQPEERQT 1053
K Q L LL L S GH+ LIF Q TK+LD+LE+++ ++ RLDGST + R
Sbjct: 612 KFQVLNQLLPPLLSSGHKVLIFAQFTKVLDLLEDWLEESPLSHGKICRLDGSTNHQIRDE 671
Query: 1054 LMQRFNTNPKIFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQDRCHRIGQTRE 1113
+ +FN NPK +F+ STR+GG+GINLV ADTVI D+DWNP MD QA DR HRIGQ
Sbjct: 672 QISQFNNNPKFKVFLSSTRAGGLGINLVAADTVILMDNDWNPQMDLQAIDRVHRIGQINP 731
Query: 1114 VHIYRLISESTIEENILKKANQKRALDDLVIQSGGYN-TEFFKKLDPMELFSGHRTLP-- 1170
V I+R + + +IEE ++ ++ KR L+ LVIQ G + + F KKL + +
Sbjct: 732 VKIFRFVIKDSIEEVLISRSGSKRFLERLVIQMGQFKFSNFNKKLTAATTSNEQGAIKND 791
Query: 1171 -----MKTMQKE--KAINNGNEVSLSNADVEAALKCVEDEADYMALKRAEQEEAVDNQEF 1223
M + K K+ NG + S +A+ + + + E D + + E ++D+ +F
Sbjct: 792 WSINDMMELSKIHFKSTQNG-QTSQDSAEEDEKILLSDQEIDELLDRSVECYNSIDDSKF 850
Score = 53 (23.7 bits), Expect = 1.6e-30, Sum P(3) = 1.6e-30
Identities = 16/70 (22%), Positives = 32/70 (45%)
Query: 687 PMKQEHVIYCRLSKRQRNLYEDFIASSETQATLASANFFGMISVIM-QLRKVCNHPDLFE 745
P E ++ R K + + + + + Q L A + ++ M QLR +CN P ++
Sbjct: 538 PSYDEALVKIRHIKSKTKI-QSILIDAIYQDILKEAKHLKLQNLKMIQLRNICNSPFIYY 596
Query: 746 GRPIVSSFDM 755
PI+ ++
Sbjct: 597 NYPILDQAEV 606
Score = 43 (20.2 bits), Expect = 1.7e-29, Sum P(3) = 1.7e-29
Identities = 10/23 (43%), Positives = 16/23 (69%)
Query: 577 WKYLILDEAHLIKNWKSQRWQTL 599
+ Y ILD+A +I+N S ++Q L
Sbjct: 596 YNYPILDQAEVIRN--SAKFQVL 616
Score = 42 (19.8 bits), Expect = 6.9e-72, Sum P(3) = 6.9e-72
Identities = 11/65 (16%), Positives = 35/65 (53%)
Query: 53 KKKALDKQLEFLLGQTERYSSMLAENLVDS--HKPVQQSPMREQPGIQYKEADENGAEEP 110
K K +++ L L+ +++ YS ++A+N++ + + +Q+ + + K +N ++
Sbjct: 53 KDKKMNR-LNKLIEKSQIYSQIIADNILQTSLERKEEQNNVAPPAPVPAKSDSKNESDTQ 111
Query: 111 GVQSK 115
++ +
Sbjct: 112 PIKKR 116
Score = 40 (19.1 bits), Expect = 7.8e-30, Sum P(2) = 7.8e-30
Identities = 9/24 (37%), Positives = 16/24 (66%)
Query: 897 KTVRRSYLYSSKLADIVL-SPVER 919
K + +S +YS +AD +L + +ER
Sbjct: 62 KLIEKSQIYSQIIADNILQTSLER 85
Score = 38 (18.4 bits), Expect = 1.8e-71, Sum P(3) = 1.8e-71
Identities = 11/43 (25%), Positives = 22/43 (51%)
Query: 52 RKKKALDKQLEFLLGQTERYSSMLAENLVDSHKPVQQSPMREQ 94
+++K K G+ + SML+ N+ DS K +++ + Q
Sbjct: 115 KRRKTKPKSKSTANGKQD-IVSMLSTNISDSTKSTREAIEKSQ 156
>UNIPROTKB|E2QUR1 [details] [associations]
symbol:CHD8 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271 Pfam:PF07533
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
SMART:SM00592 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
GeneTree:ENSGT00560000077077 EMBL:AAEX03009852
Ensembl:ENSCAFT00000009072 Uniprot:E2QUR1
Length = 2200
Score = 490 (177.5 bits), Expect = 9.2e-72, Sum P(4) = 9.2e-72
Identities = 119/306 (38%), Positives = 172/306 (56%)
Query: 455 LREYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTIAMLAHLACEKGIWGPHLIVVPTS 514
LREYQ G++WL+ + R N ILADEMGLGKTI +IA L + GI GP L++ P S
Sbjct: 428 LREYQLEGVNWLLFNWYNRQNCILADEMGLGKTIQSIAFLQEVY-NVGIHGPFLVIAPLS 486
Query: 515 VMLNWETEFLKWCPAFKILTYFGSAKERKFKRQ---------GWLKPNS--FHVCITTYR 563
+ NWE EF W + Y GS R+ +Q G L P + F ITT+
Sbjct: 487 TITNWEREFNTWTE-MNTIVYHGSLASRQMIQQYEMYCKDSRGRLIPGAYKFDALITTFE 545
Query: 564 LIIQDSKVFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPLQNDLMELW 623
+I+ D + +W+ +I+DEAH +KN + +L + + + ++LLTGTPLQN + EL+
Sbjct: 546 MILSDCPELREIEWRCVIIDEAHRLKNRNCKLLDSLKHMDLEHKVLLTGTPLQNTVEELF 605
Query: 624 SLMHFLMPHIFQSHQEF-KDWFCNPISGMVEGQEKVNKEVVDRLHNVLRPFILRRLKRDV 682
SL+HFL P F S EF KD+ G ++ +E+V K L +L+P +LRRLK DV
Sbjct: 606 SLLHFLEPSQFPSESEFLKDF------GDLKTEEQVQK-----LQAILKPMMLRRLKEDV 654
Query: 683 EKQLPMKQEHVIYCRLSKRQRNLYEDFIASSETQATLASA--NFFGMISVIMQLRKVCNH 740
EK L KQE +I L+ Q+ Y + + + + + N +++ +M+LRK CNH
Sbjct: 655 EKNLAPKQETIIEVELTNIQKKYYRAILEKNFSFLSKGAGHTNMPNLLNTMMELRKCCNH 714
Query: 741 PDLFEG 746
P L G
Sbjct: 715 PYLING 720
Score = 371 (135.7 bits), Expect = 9.2e-72, Sum P(4) = 9.2e-72
Identities = 75/152 (49%), Positives = 102/152 (67%)
Query: 996 GKLQELAILLRKLKSDGHRALIFTQMTKMLDILEEFISLYGYTYMRLDGSTQPEERQTLM 1055
GKL + LL KLK+ GH+ LIF+QM + LDILE+++ Y Y R+DG + RQ +
Sbjct: 750 GKLVLIDKLLPKLKAGGHKVLIFSQMVRCLDILEDYLIQRRYLYERIDGRVRGNLRQAAI 809
Query: 1056 QRFNT-NPKIFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQDRCHRIGQTREV 1114
RF+ + F+F+L TR+GG+GINL ADT I +DSDWNP D QAQ RCHRIGQ++ V
Sbjct: 810 DRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAV 869
Query: 1115 HIYRLISESTIEENILKKANQKRALDDLVIQS 1146
+YRLI+ ++ E + KA+ K LD V+QS
Sbjct: 870 KVYRLITRNSYEREMFDKASLKLGLDKAVLQS 901
Score = 44 (20.5 bits), Expect = 9.2e-72, Sum P(4) = 9.2e-72
Identities = 11/46 (23%), Positives = 22/46 (47%)
Query: 1453 SVEPMSIDDDFYDEDATFSDAMSPPSTSQKKRKKAELALYDDEERE 1498
+V P+ ++D+ D D+ + PS+S + + D+ E E
Sbjct: 1674 NVPPVKLEDED-DSDSELDLSKLSPSSSSSSSSSSSSSSTDESEDE 1718
Score = 42 (19.8 bits), Expect = 2.0e-70, Sum P(5) = 2.0e-70
Identities = 16/71 (22%), Positives = 29/71 (40%)
Query: 1898 PKSKLRKTSMEHSEIQHSSPEPVSNQSVATKDANLRFDLIQEAWLEDM--DGGRLSCMDQ 1955
P KL SE+ S P S+ S ++ ++ D ++ E + D R D+
Sbjct: 1676 PPVKLEDEDDSDSELDLSKLSPSSSSSSSSSSSSSSTDESEDEKEEKLSADRSRSKLYDE 1735
Query: 1956 DLSLETVLSSE 1966
+ L +S +
Sbjct: 1736 ESLLSLTMSQD 1746
Score = 41 (19.5 bits), Expect = 4.1e-70, Sum P(5) = 4.1e-70
Identities = 22/101 (21%), Positives = 43/101 (42%)
Query: 1790 PVIEQLDLTLEFQRELVDSTISFPPRVNLSVYGSDLETSVNKSTR----ENHHLKDSQVA 1845
P +E L TL+ + E+V + P + V SD V+++ E+ DS++
Sbjct: 1634 PSLESL--TLKLEHEVVARSRPTPQDYEMRVAPSDTTPLVSRNVPPVKLEDEDDSDSELD 1691
Query: 1846 ENRFRDAARACIEDSLGWASSAFPANDAKLRSVPKSQSLGK 1886
++ ++ + S +SS + D K + +S K
Sbjct: 1692 LSKLSPSSSSSSSSSSS-SSSTDESEDEKEEKLSADRSRSK 1731
Score = 39 (18.8 bits), Expect = 2.0e-70, Sum P(5) = 2.0e-70
Identities = 7/34 (20%), Positives = 20/34 (58%)
Query: 1520 DSKLSRKRHDGSTELKTCESIFIDLEQKSASRSK 1553
D+ + + + + ++ + ES+ + LE + +RS+
Sbjct: 1619 DAPVEKPPEETAAQVPSLESLTLKLEHEVVARSR 1652
Score = 39 (18.8 bits), Expect = 3.3e-36, Sum P(5) = 3.3e-36
Identities = 7/14 (50%), Positives = 10/14 (71%)
Query: 892 DILQQKTVRRSYLY 905
DIL+ ++R YLY
Sbjct: 780 DILEDYLIQRRYLY 793
Score = 38 (18.4 bits), Expect = 9.2e-72, Sum P(4) = 9.2e-72
Identities = 9/20 (45%), Positives = 12/20 (60%)
Query: 1223 FTEEAVGRPEDDELVIEDTV 1242
F E+A GRP+D + E V
Sbjct: 1273 FLEKA-GRPDDKAIAAEHRV 1291
Score = 37 (18.1 bits), Expect = 4.9e-71, Sum P(4) = 4.9e-71
Identities = 9/35 (25%), Positives = 20/35 (57%)
Query: 1943 EDMDGGRLSCMDQDLSL----ETVLSSEIPHNYFP 1973
+D +G L MD+++S+ E ++ + H ++P
Sbjct: 1323 QDDEGDPLMMMDEEISVIDGDEAQVTQQPGHLFWP 1357
Score = 37 (18.1 bits), Expect = 3.2e-70, Sum P(5) = 3.2e-70
Identities = 8/24 (33%), Positives = 13/24 (54%)
Query: 1725 NGLYLGGSFFSSVTQTSCKSTREP 1748
+G L G+ V+QT C ++P
Sbjct: 1547 DGELLRGAARHGVSQTDCNIMQDP 1570
>UNIPROTKB|Q9HCK8 [details] [associations]
symbol:CHD8 "Chromodomain-helicase-DNA-binding protein 8"
species:9606 "Homo sapiens" [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0001701 "in utero embryonic
development" evidence=IEA] [GO:0043066 "negative regulation of
apoptotic process" evidence=IEA] [GO:0070016 "armadillo repeat
domain binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IMP] [GO:0005634 "nucleus" evidence=IDA] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=IDA]
[GO:0030178 "negative regulation of Wnt receptor signaling pathway"
evidence=IDA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0005524 "ATP binding"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0003678 "DNA helicase activity" evidence=IMP] [GO:0035064
"methylated histone residue binding" evidence=IDA] [GO:0045945
"positive regulation of transcription from RNA polymerase III
promoter" evidence=IMP] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IMP] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IDA] [GO:0043044 "ATP-dependent chromatin remodeling"
evidence=IMP] [GO:0043234 "protein complex" evidence=IDA]
[GO:0002039 "p53 binding" evidence=ISS] [GO:0008013 "beta-catenin
binding" evidence=IDA] [GO:0071339 "MLL1 complex" evidence=IDA]
[GO:0042393 "histone binding" evidence=ISS] [GO:0032508 "DNA duplex
unwinding" evidence=IMP] InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271
Pfam:PF07533 PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 SMART:SM00592 Pfam:PF00385
GO:GO:0005524 GO:GO:0045892 GO:GO:0043066 GO:GO:0003677
GO:GO:0001701 GO:GO:0045944 GO:GO:0006351 GO:GO:0035064
GO:GO:0008013 GO:GO:0045945 GO:GO:0030178 GO:GO:0060070
InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0003678
GO:GO:0043044 GO:GO:0071339 GO:GO:0002039 InterPro:IPR023780
PROSITE:PS00598 GO:GO:0008094 HOVERGEN:HBG107676 EMBL:CR749315
EMBL:AL834524 EMBL:AL135744 EMBL:AL161747 EMBL:CB043942
EMBL:AB046784 EMBL:AK131077 EMBL:BC011695 EMBL:BC025964
EMBL:BC036920 EMBL:BC063693 EMBL:BC073903 EMBL:BC098452
IPI:IPI00398992 IPI:IPI00719073 RefSeq:NP_001164100.1
RefSeq:NP_065971.2 UniGene:Hs.530698 PDB:2CKA PDB:2DL6 PDBsum:2CKA
PDBsum:2DL6 ProteinModelPortal:Q9HCK8 SMR:Q9HCK8 IntAct:Q9HCK8
STRING:Q9HCK8 PhosphoSite:Q9HCK8 DMDM:226706293 PaxDb:Q9HCK8
PRIDE:Q9HCK8 Ensembl:ENST00000399982 Ensembl:ENST00000430710
Ensembl:ENST00000557364 GeneID:57680 KEGG:hsa:57680 UCSC:uc001war.2
UCSC:uc001was.2 CTD:57680 GeneCards:GC14M021853 HGNC:HGNC:20153
HPA:HPA000849 MIM:610528 neXtProt:NX_Q9HCK8 PharmGKB:PA134957052
KO:K04494 OMA:FLAYMED EvolutionaryTrace:Q9HCK8 GenomeRNAi:57680
NextBio:64494 ArrayExpress:Q9HCK8 Bgee:Q9HCK8 CleanEx:HS_CHD8
Genevestigator:Q9HCK8 GermOnline:ENSG00000100888 Uniprot:Q9HCK8
Length = 2581
Score = 490 (177.5 bits), Expect = 1.1e-71, Sum P(4) = 1.1e-71
Identities = 119/306 (38%), Positives = 172/306 (56%)
Query: 455 LREYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTIAMLAHLACEKGIWGPHLIVVPTS 514
LREYQ G++WL+ + R N ILADEMGLGKTI +IA L + GI GP L++ P S
Sbjct: 811 LREYQLEGVNWLLFNWYNRQNCILADEMGLGKTIQSIAFLQEVY-NVGIHGPFLVIAPLS 869
Query: 515 VMLNWETEFLKWCPAFKILTYFGSAKERKFKRQ---------GWLKPNS--FHVCITTYR 563
+ NWE EF W + Y GS R+ +Q G L P + F ITT+
Sbjct: 870 TITNWEREFNTWTE-MNTIVYHGSLASRQMIQQYEMYCKDSRGRLIPGAYKFDALITTFE 928
Query: 564 LIIQDSKVFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPLQNDLMELW 623
+I+ D + +W+ +I+DEAH +KN + +L + + + ++LLTGTPLQN + EL+
Sbjct: 929 MILSDCPELREIEWRCVIIDEAHRLKNRNCKLLDSLKHMDLEHKVLLTGTPLQNTVEELF 988
Query: 624 SLMHFLMPHIFQSHQEF-KDWFCNPISGMVEGQEKVNKEVVDRLHNVLRPFILRRLKRDV 682
SL+HFL P F S EF KD+ G ++ +E+V K L +L+P +LRRLK DV
Sbjct: 989 SLLHFLEPSQFPSESEFLKDF------GDLKTEEQVQK-----LQAILKPMMLRRLKEDV 1037
Query: 683 EKQLPMKQEHVIYCRLSKRQRNLYEDFIASSETQATLASA--NFFGMISVIMQLRKVCNH 740
EK L KQE +I L+ Q+ Y + + + + + N +++ +M+LRK CNH
Sbjct: 1038 EKNLAPKQETIIEVELTNIQKKYYRAILEKNFSFLSKGAGHTNMPNLLNTMMELRKCCNH 1097
Query: 741 PDLFEG 746
P L G
Sbjct: 1098 PYLING 1103
Score = 371 (135.7 bits), Expect = 1.1e-71, Sum P(4) = 1.1e-71
Identities = 75/152 (49%), Positives = 102/152 (67%)
Query: 996 GKLQELAILLRKLKSDGHRALIFTQMTKMLDILEEFISLYGYTYMRLDGSTQPEERQTLM 1055
GKL + LL KLK+ GH+ LIF+QM + LDILE+++ Y Y R+DG + RQ +
Sbjct: 1133 GKLVLIDKLLPKLKAGGHKVLIFSQMVRCLDILEDYLIQRRYLYERIDGRVRGNLRQAAI 1192
Query: 1056 QRFNT-NPKIFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQDRCHRIGQTREV 1114
RF+ + F+F+L TR+GG+GINL ADT I +DSDWNP D QAQ RCHRIGQ++ V
Sbjct: 1193 DRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAV 1252
Query: 1115 HIYRLISESTIEENILKKANQKRALDDLVIQS 1146
+YRLI+ ++ E + KA+ K LD V+QS
Sbjct: 1253 KVYRLITRNSYEREMFDKASLKLGLDKAVLQS 1284
Score = 47 (21.6 bits), Expect = 1.1e-71, Sum P(4) = 1.1e-71
Identities = 12/46 (26%), Positives = 22/46 (47%)
Query: 1453 SVEPMSIDDDFYDEDATFSDAMSPPSTSQKKRKKAELALYDDEERE 1498
SV P+ ++D+ D D+ + PS+S + + D+ E E
Sbjct: 2057 SVPPVKLEDED-DSDSELDLSKLSPSSSSSSSSSSSSSSTDESEDE 2101
Score = 46 (21.3 bits), Expect = 5.4e-71, Sum P(5) = 5.4e-71
Identities = 23/97 (23%), Positives = 40/97 (41%)
Query: 1876 RSVPKSQSLGKHKLSLSDSV-----KCPKSKLRKTSMEHSEIQHSSPEPVSNQSVATKDA 1930
RS P Q + ++S SD+ P KL SE+ S P S+ S ++ +
Sbjct: 2033 RSRPTPQDY-EMRVSPSDTTPLVSRSVPPVKLEDEDDSDSELDLSKLSPSSSSSSSSSSS 2091
Query: 1931 NLRFDLIQEAWLEDM-DGGRLSCMDQDLSLETVLSSE 1966
+ D ++ E + D R D++ L +S +
Sbjct: 2092 SSSTDESEDEKEEKLTDQSRSKLYDEESLLSLTMSQD 2128
Score = 45 (20.9 bits), Expect = 5.4e-71, Sum P(5) = 5.4e-71
Identities = 8/34 (23%), Positives = 21/34 (61%)
Query: 1520 DSKLSRKRHDGSTELKTCESIFIDLEQKSASRSK 1553
D+ + + + +T++ + ES+ + LE + +RS+
Sbjct: 2002 DAPVEKSPEETATQVPSLESLTLKLEHEVVARSR 2035
Score = 41 (19.5 bits), Expect = 1.2e-69, Sum P(5) = 1.2e-69
Identities = 33/160 (20%), Positives = 65/160 (40%)
Query: 1790 PVIEQLDLTLEFQRELVDSTISFPPRVNLSVYGSDLETSVNKSTRENHHLKDSQVAENRF 1849
P +E L TL+ + E+V + P + V SD V++S L+D +++
Sbjct: 2017 PSLESL--TLKLEHEVVARSRPTPQDYEMRVSPSDTTPLVSRSVPPVK-LEDEDDSDSEL 2073
Query: 1850 RDAARACIEDSLGWASSAFPANDAKLRSVPKSQSLGKHKLSLSDSVKCPKSKLRKTSMEH 1909
D ++ S +SS+ ++ + + + + + L D + + +
Sbjct: 2074 -DLSKLSPSSSSSSSSSSSSSSTDESEDEKEEKLTDQSRSKLYDEESLLSLTMSQDGFPN 2132
Query: 1910 SEIQHSSPEPVSNQ-----SVATKDANL--RFDLIQEAWL 1942
+ + +PE + Q S KD L R DL+ +A L
Sbjct: 2133 EDGEQMTPELLLLQERQRASEWPKDRVLINRIDLVCQAVL 2172
Score = 39 (18.8 bits), Expect = 9.0e-37, Sum P(5) = 9.0e-37
Identities = 7/14 (50%), Positives = 10/14 (71%)
Query: 892 DILQQKTVRRSYLY 905
DIL+ ++R YLY
Sbjct: 1163 DILEDYLIQRRYLY 1176
Score = 38 (18.4 bits), Expect = 1.1e-71, Sum P(4) = 1.1e-71
Identities = 9/20 (45%), Positives = 12/20 (60%)
Query: 1223 FTEEAVGRPEDDELVIEDTV 1242
F E+A GRP+D + E V
Sbjct: 1656 FLEKA-GRPDDKAIAAEHRV 1674
Score = 37 (18.1 bits), Expect = 1.2e-70, Sum P(4) = 1.2e-70
Identities = 9/35 (25%), Positives = 20/35 (57%)
Query: 1943 EDMDGGRLSCMDQDLSL----ETVLSSEIPHNYFP 1973
+D +G L MD+++S+ E ++ + H ++P
Sbjct: 1706 QDDEGDPLMMMDEEISVIDGDEAQVTQQPGHLFWP 1740
Score = 37 (18.1 bits), Expect = 3.6e-70, Sum P(5) = 3.6e-70
Identities = 8/24 (33%), Positives = 13/24 (54%)
Query: 1725 NGLYLGGSFFSSVTQTSCKSTREP 1748
+G L G+ V+QT C ++P
Sbjct: 1930 DGELLRGAARHGVSQTDCNIMQDP 1953
>MGI|MGI:1915022 [details] [associations]
symbol:Chd8 "chromodomain helicase DNA binding protein 8"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0001701 "in utero embryonic development"
evidence=IMP] [GO:0002039 "p53 binding" evidence=IPI] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=ISO;IDA] [GO:0003678 "DNA helicase activity" evidence=ISO]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=ISO]
[GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008013
"beta-catenin binding" evidence=ISO] [GO:0008094 "DNA-dependent
ATPase activity" evidence=ISO] [GO:0016055 "Wnt receptor signaling
pathway" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016817 "hydrolase activity, acting on acid anhydrides"
evidence=IEA] [GO:0030178 "negative regulation of Wnt receptor
signaling pathway" evidence=ISO] [GO:0032508 "DNA duplex unwinding"
evidence=ISO] [GO:0035064 "methylated histone residue binding"
evidence=ISO] [GO:0042393 "histone binding" evidence=IDA]
[GO:0043044 "ATP-dependent chromatin remodeling" evidence=ISO]
[GO:0043066 "negative regulation of apoptotic process"
evidence=IMP;IDA] [GO:0043234 "protein complex" evidence=ISO]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=ISO;IDA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=ISO] [GO:0045945 "positive regulation of transcription
from RNA polymerase III promoter" evidence=ISO] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=ISO]
[GO:0070016 "armadillo repeat domain binding" evidence=ISO]
[GO:0071339 "MLL1 complex" evidence=ISO] InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR006576
Pfam:PF00176 Pfam:PF00271 Pfam:PF07533 PROSITE:PS00690
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
SMART:SM00592 MGI:MGI:1915022 Pfam:PF00385 GO:GO:0005524
GO:GO:0045892 GO:GO:0043066 GO:GO:0003677 GO:GO:0001701
GO:GO:0045944 GO:GO:0006351 GO:GO:0035064 GO:GO:0008013
GO:GO:0045945 GO:GO:0030178 GO:GO:0060070 InterPro:IPR016197
SUPFAM:SSF54160 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0003678 GO:GO:0043044 GO:GO:0071339
InterPro:IPR023780 PROSITE:PS00598 GO:GO:0008094
HOGENOM:HOG000246942 GeneTree:ENSGT00560000077077
HOVERGEN:HBG107676 OrthoDB:EOG4ZPDTC CTD:57680 KO:K04494
OMA:FLAYMED EMBL:DQ190419 EMBL:AY863219 EMBL:AK129393 EMBL:AK160299
IPI:IPI00858099 IPI:IPI00923681 RefSeq:NP_963999.2
UniGene:Mm.289934 ProteinModelPortal:Q09XV5 SMR:Q09XV5
IntAct:Q09XV5 STRING:Q09XV5 PhosphoSite:Q09XV5 PaxDb:Q09XV5
PRIDE:Q09XV5 Ensembl:ENSMUST00000089752 GeneID:67772 KEGG:mmu:67772
UCSC:uc007tot.1 UCSC:uc007tov.1 InParanoid:Q09XV5 ChiTaRS:CHD8
NextBio:325525 Bgee:Q09XV5 Genevestigator:Q09XV5 Uniprot:Q09XV5
Length = 2582
Score = 490 (177.5 bits), Expect = 1.1e-71, Sum P(4) = 1.1e-71
Identities = 119/306 (38%), Positives = 172/306 (56%)
Query: 455 LREYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTIAMLAHLACEKGIWGPHLIVVPTS 514
LREYQ G++WL+ + R N ILADEMGLGKTI +IA L + GI GP L++ P S
Sbjct: 813 LREYQLEGVNWLLFNWYNRQNCILADEMGLGKTIQSIAFLQEVY-NVGIHGPFLVIAPLS 871
Query: 515 VMLNWETEFLKWCPAFKILTYFGSAKERKFKRQ---------GWLKPNS--FHVCITTYR 563
+ NWE EF W + Y GS R+ +Q G L P + F ITT+
Sbjct: 872 TITNWEREFNTWTE-MNTIVYHGSLASRQMIQQYEMYCKDSRGRLIPGAYKFDALITTFE 930
Query: 564 LIIQDSKVFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPLQNDLMELW 623
+I+ D + +W+ +I+DEAH +KN + +L + + + ++LLTGTPLQN + EL+
Sbjct: 931 MILSDCPELREIEWRCVIIDEAHRLKNRNCKLLDSLKHMDLEHKVLLTGTPLQNTVEELF 990
Query: 624 SLMHFLMPHIFQSHQEF-KDWFCNPISGMVEGQEKVNKEVVDRLHNVLRPFILRRLKRDV 682
SL+HFL P F S EF KD+ G ++ +E+V K L +L+P +LRRLK DV
Sbjct: 991 SLLHFLEPSQFPSESEFLKDF------GDLKTEEQVQK-----LQAILKPMMLRRLKEDV 1039
Query: 683 EKQLPMKQEHVIYCRLSKRQRNLYEDFIASSETQATLASA--NFFGMISVIMQLRKVCNH 740
EK L KQE +I L+ Q+ Y + + + + + N +++ +M+LRK CNH
Sbjct: 1040 EKNLAPKQETIIEVELTNIQKKYYRAILEKNFSFLSKGAGHTNMPNLLNTMMELRKCCNH 1099
Query: 741 PDLFEG 746
P L G
Sbjct: 1100 PYLING 1105
Score = 371 (135.7 bits), Expect = 1.1e-71, Sum P(4) = 1.1e-71
Identities = 75/152 (49%), Positives = 102/152 (67%)
Query: 996 GKLQELAILLRKLKSDGHRALIFTQMTKMLDILEEFISLYGYTYMRLDGSTQPEERQTLM 1055
GKL + LL KLK+ GH+ LIF+QM + LDILE+++ Y Y R+DG + RQ +
Sbjct: 1135 GKLVLIDKLLPKLKAGGHKVLIFSQMVRCLDILEDYLIQRRYLYERIDGRVRGNLRQAAI 1194
Query: 1056 QRFNT-NPKIFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQDRCHRIGQTREV 1114
RF+ + F+F+L TR+GG+GINL ADT I +DSDWNP D QAQ RCHRIGQ++ V
Sbjct: 1195 DRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAV 1254
Query: 1115 HIYRLISESTIEENILKKANQKRALDDLVIQS 1146
+YRLI+ ++ E + KA+ K LD V+QS
Sbjct: 1255 KVYRLITRNSYEREMFDKASLKLGLDKAVLQS 1286
Score = 47 (21.6 bits), Expect = 1.1e-71, Sum P(4) = 1.1e-71
Identities = 12/46 (26%), Positives = 22/46 (47%)
Query: 1453 SVEPMSIDDDFYDEDATFSDAMSPPSTSQKKRKKAELALYDDEERE 1498
SV P+ ++D+ D D+ + PS+S + + D+ E E
Sbjct: 2058 SVPPVKLEDED-DSDSELDLSKLSPSSSSSSSSSSSSSSTDESEDE 2102
Score = 44 (20.5 bits), Expect = 1.4e-70, Sum P(5) = 1.4e-70
Identities = 20/78 (25%), Positives = 33/78 (42%)
Query: 1891 LSDSVKCPKSKLRKTSMEHSEIQHSSPEPVSNQSVATKDANLRFDLIQEAWLEDM--DGG 1948
LS SV P KL SE+ S P S+ S ++ ++ D ++ E + D
Sbjct: 2055 LSRSV--PPVKLEDEDDSDSELDLSKLSPSSSSSSSSSSSSSSTDESEDEKEEKLTADRS 2112
Query: 1949 RLSCMDQDLSLETVLSSE 1966
R D++ L +S +
Sbjct: 2113 RPKLYDEESLLSLTMSQD 2130
Score = 43 (20.2 bits), Expect = 1.4e-70, Sum P(5) = 1.4e-70
Identities = 7/35 (20%), Positives = 20/35 (57%)
Query: 1520 DSKLSRKRHDGSTELKTCESIFIDLEQKSASRSKM 1554
D+ + + + + ++ ES+ + LE + +RS++
Sbjct: 2004 DAPVEKSPEESTVQVPNLESLTLKLEDEVVARSRL 2038
Score = 39 (18.8 bits), Expect = 2.3e-36, Sum P(5) = 2.3e-36
Identities = 7/14 (50%), Positives = 10/14 (71%)
Query: 892 DILQQKTVRRSYLY 905
DIL+ ++R YLY
Sbjct: 1165 DILEDYLIQRRYLY 1178
Score = 38 (18.4 bits), Expect = 1.1e-71, Sum P(4) = 1.1e-71
Identities = 9/20 (45%), Positives = 12/20 (60%)
Query: 1223 FTEEAVGRPEDDELVIEDTV 1242
F E+A GRP+D + E V
Sbjct: 1658 FLEKA-GRPDDKAIAAEHRV 1676
Score = 37 (18.1 bits), Expect = 5.9e-70, Sum P(5) = 5.9e-70
Identities = 8/24 (33%), Positives = 13/24 (54%)
Query: 1725 NGLYLGGSFFSSVTQTSCKSTREP 1748
+G L G+ V+QT C ++P
Sbjct: 1932 DGELLRGAARHGVSQTDCNIMQDP 1955
Score = 37 (18.1 bits), Expect = 1.2e-23, Sum P(5) = 1.2e-23
Identities = 8/25 (32%), Positives = 14/25 (56%)
Query: 799 SDELNAIATPASLIKERADLNNLEE 823
+ E+ A+++PAS A +EE
Sbjct: 426 ASEVAALSSPASCAPHTAGKTGMEE 450
>WB|WBGene00002637 [details] [associations]
symbol:let-418 species:6239 "Caenorhabditis elegans"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0016818 "hydrolase activity,
acting on acid anhydrides, in phosphorus-containing anhydrides"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0040035 "hermaphrodite genitalia
development" evidence=IMP] [GO:0048557 "embryonic digestive tract
morphogenesis" evidence=IGI] [GO:0000977 "RNA polymerase II
regulatory region sequence-specific DNA binding" evidence=IDA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IMP] [GO:0008134 "transcription
factor binding" evidence=IPI] [GO:0016581 "NuRD complex"
evidence=ISS] [GO:0040027 "negative regulation of vulval
development" evidence=IMP] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0009792 GO:GO:0040007 GO:GO:0002119 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0000122 GO:GO:0040035
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0040027
InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 GO:GO:0016581 InterPro:IPR023780
PROSITE:PS00598 GeneTree:ENSGT00560000076896 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 KO:K11643
GO:GO:0048557 HSSP:Q14839 EMBL:AF308445 EMBL:FO080294 PIR:T34239
RefSeq:NP_504523.1 UniGene:Cel.16862 ProteinModelPortal:G5EBZ4
SMR:G5EBZ4 IntAct:G5EBZ4 STRING:Q19815 EnsemblMetazoa:F26F12.7
GeneID:178970 KEGG:cel:CELE_F26F12.7 CTD:178970 WormBase:F26F12.7
OMA:VTQDATE NextBio:903342 Uniprot:G5EBZ4
Length = 1829
Score = 400 (145.9 bits), Expect = 1.3e-71, Sum P(5) = 1.3e-71
Identities = 97/234 (41%), Positives = 134/234 (57%)
Query: 996 GKLQELAILLRKLKSDGHRALIFTQMTKMLDILEEFISLYGYTYMRLDGSTQPEERQTLM 1055
GK L +LRKLK GHR LIF+QMT+MLDI+E+ GY Y R+DGS + RQ +
Sbjct: 926 GKFVLLQKMLRKLKDGGHRVLIFSQMTRMLDIMEDLCEYEGYRYERIDGSIMGQMRQDAI 985
Query: 1056 QRFNT-NPKIFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQDRCHRIGQTREV 1114
R+N + F+F+LSTR+GG+GINL ADTVI YDSDWNP D QA R HR+GQ +V
Sbjct: 986 DRYNAPGAQQFIFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRLGQKHKV 1045
Query: 1115 HIYRLISESTIEENILKKANQKRALDDLVIQSGGYNTEFFKKLDPMELFSGHRTLPMKTM 1174
IYR +++ ++EE I A +K L+ LV+++G E K + EL R +
Sbjct: 1046 MIYRFVTKKSVEEKITSVAKKKMLLNHLVVRAGLGGKEG-KTMSKTELDDVLRWGTEELF 1104
Query: 1175 QKEKAINNGNEVSLSNADVEAALKCVEDEADYMAL-KRAEQEEAVDNQEFTEEA 1227
++ G A AA + V D+A AL R+ +EE ++ E+A
Sbjct: 1105 SEDLDAAEGEGSEKKGA---AAQEIVWDDAAVDALLDRSNKEETPAGEDGEEKA 1155
Score = 300 (110.7 bits), Expect = 1.3e-71, Sum P(5) = 1.3e-71
Identities = 68/191 (35%), Positives = 108/191 (56%)
Query: 555 FHVCITTYRLIIQDSKVFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTP 614
FHV +T+Y I D + +W L++DEAH +KN +S ++ L + R+LLTGTP
Sbjct: 721 FHVLLTSYETINMDKTILSSIEWGALVVDEAHRLKNNQSLFFKNLNEYTIHYRVLLTGTP 780
Query: 615 LQNDLMELWSLMHFLMPHIFQSHQEFKDWFCNPISGMVEGQEKVNKEVVDRLHNVLRPFI 674
LQN+L EL+ L++FL F + F F N IS ++ +++LHN+L P +
Sbjct: 781 LQNNLEELFHLLNFLSKERFNQLEAFTAEF-NEIS---------KEDQIEKLHNLLGPHM 830
Query: 675 LRRLKRDVEKQLPMKQEHVIYCRLSKRQRNLYEDFIASSETQATLASANF-FGMISVIMQ 733
LRRLK DV +P K E ++ LS Q+ Y++ + + + + +++V+M+
Sbjct: 831 LRRLKADVLTGMPSKSELIVRVELSAMQKKWYKNILTRNFDALNVKNGGTQMSLMNVLME 890
Query: 734 LRKVCNHPDLF 744
L+K CNHP LF
Sbjct: 891 LKKCCNHPYLF 901
Score = 194 (73.4 bits), Expect = 1.3e-71, Sum P(5) = 1.3e-71
Identities = 40/93 (43%), Positives = 52/93 (55%)
Query: 455 LREYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTIAMLAHLACEKGIWGPHLIVVPTS 514
L YQ GL+WL + + ILADEMGLGKT+ ++ L L E GP LI P S
Sbjct: 602 LHPYQLEGLNWLRHCWSNGTDAILADEMGLGKTVQSLTFLYSLMKEGHCKGPFLIAAPLS 661
Query: 515 VMLNWETEFLKWCPAFKILTYFGSAKERKFKRQ 547
++NWE E +WCP F ++TY G R R+
Sbjct: 662 TIINWEREAEQWCPDFYVVTYVGLRDARVVLRE 694
Score = 55 (24.4 bits), Expect = 1.3e-71, Sum P(5) = 1.3e-71
Identities = 17/52 (32%), Positives = 25/52 (48%)
Query: 1449 KEEPSVEPMSIDDDFYDEDATFSDAMSPPSTSQKKRKKAEL--ALYDDEERE 1498
KEEP EPM +D T + A S P+T + + A + + DE +E
Sbjct: 1431 KEEPKEEPMEKED----ATETVNGATSEPATDAESEQNAPVDEPMDTDEAKE 1478
Score = 41 (19.5 bits), Expect = 1.3e-71, Sum P(5) = 1.3e-71
Identities = 10/53 (18%), Positives = 26/53 (49%)
Query: 65 LGQTERYSSMLAENLVDSHKPVQQSPMREQPGIQYKEADENGAEEPGVQSKEA 117
+ + +SS++ +++++ S M ++YKE ++ A + K+A
Sbjct: 106 ISNLKTFSSIIKPQILEANPGTNVSKMYPMFQVKYKEYQDHMAAQGKPVQKQA 158
Score = 37 (18.1 bits), Expect = 2.1e-29, Sum P(4) = 2.1e-29
Identities = 7/24 (29%), Positives = 12/24 (50%)
Query: 790 LDFSMNSWESDELNAIATPASLIK 813
L + +WE D+ N ++IK
Sbjct: 514 LSYDQATWERDDSNIANYEEAIIK 537
>UNIPROTKB|G5EBZ4 [details] [associations]
symbol:let-418 "Protein let-418" species:6239
"Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0009792 GO:GO:0040007 GO:GO:0002119 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0000122 GO:GO:0040035
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0040027
InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 GO:GO:0016581 InterPro:IPR023780
PROSITE:PS00598 GeneTree:ENSGT00560000076896 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 KO:K11643
GO:GO:0048557 HSSP:Q14839 EMBL:AF308445 EMBL:FO080294 PIR:T34239
RefSeq:NP_504523.1 UniGene:Cel.16862 ProteinModelPortal:G5EBZ4
SMR:G5EBZ4 IntAct:G5EBZ4 STRING:Q19815 EnsemblMetazoa:F26F12.7
GeneID:178970 KEGG:cel:CELE_F26F12.7 CTD:178970 WormBase:F26F12.7
OMA:VTQDATE NextBio:903342 Uniprot:G5EBZ4
Length = 1829
Score = 400 (145.9 bits), Expect = 1.3e-71, Sum P(5) = 1.3e-71
Identities = 97/234 (41%), Positives = 134/234 (57%)
Query: 996 GKLQELAILLRKLKSDGHRALIFTQMTKMLDILEEFISLYGYTYMRLDGSTQPEERQTLM 1055
GK L +LRKLK GHR LIF+QMT+MLDI+E+ GY Y R+DGS + RQ +
Sbjct: 926 GKFVLLQKMLRKLKDGGHRVLIFSQMTRMLDIMEDLCEYEGYRYERIDGSIMGQMRQDAI 985
Query: 1056 QRFNT-NPKIFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQDRCHRIGQTREV 1114
R+N + F+F+LSTR+GG+GINL ADTVI YDSDWNP D QA R HR+GQ +V
Sbjct: 986 DRYNAPGAQQFIFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRLGQKHKV 1045
Query: 1115 HIYRLISESTIEENILKKANQKRALDDLVIQSGGYNTEFFKKLDPMELFSGHRTLPMKTM 1174
IYR +++ ++EE I A +K L+ LV+++G E K + EL R +
Sbjct: 1046 MIYRFVTKKSVEEKITSVAKKKMLLNHLVVRAGLGGKEG-KTMSKTELDDVLRWGTEELF 1104
Query: 1175 QKEKAINNGNEVSLSNADVEAALKCVEDEADYMAL-KRAEQEEAVDNQEFTEEA 1227
++ G A AA + V D+A AL R+ +EE ++ E+A
Sbjct: 1105 SEDLDAAEGEGSEKKGA---AAQEIVWDDAAVDALLDRSNKEETPAGEDGEEKA 1155
Score = 300 (110.7 bits), Expect = 1.3e-71, Sum P(5) = 1.3e-71
Identities = 68/191 (35%), Positives = 108/191 (56%)
Query: 555 FHVCITTYRLIIQDSKVFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTP 614
FHV +T+Y I D + +W L++DEAH +KN +S ++ L + R+LLTGTP
Sbjct: 721 FHVLLTSYETINMDKTILSSIEWGALVVDEAHRLKNNQSLFFKNLNEYTIHYRVLLTGTP 780
Query: 615 LQNDLMELWSLMHFLMPHIFQSHQEFKDWFCNPISGMVEGQEKVNKEVVDRLHNVLRPFI 674
LQN+L EL+ L++FL F + F F N IS ++ +++LHN+L P +
Sbjct: 781 LQNNLEELFHLLNFLSKERFNQLEAFTAEF-NEIS---------KEDQIEKLHNLLGPHM 830
Query: 675 LRRLKRDVEKQLPMKQEHVIYCRLSKRQRNLYEDFIASSETQATLASANF-FGMISVIMQ 733
LRRLK DV +P K E ++ LS Q+ Y++ + + + + +++V+M+
Sbjct: 831 LRRLKADVLTGMPSKSELIVRVELSAMQKKWYKNILTRNFDALNVKNGGTQMSLMNVLME 890
Query: 734 LRKVCNHPDLF 744
L+K CNHP LF
Sbjct: 891 LKKCCNHPYLF 901
Score = 194 (73.4 bits), Expect = 1.3e-71, Sum P(5) = 1.3e-71
Identities = 40/93 (43%), Positives = 52/93 (55%)
Query: 455 LREYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTIAMLAHLACEKGIWGPHLIVVPTS 514
L YQ GL+WL + + ILADEMGLGKT+ ++ L L E GP LI P S
Sbjct: 602 LHPYQLEGLNWLRHCWSNGTDAILADEMGLGKTVQSLTFLYSLMKEGHCKGPFLIAAPLS 661
Query: 515 VMLNWETEFLKWCPAFKILTYFGSAKERKFKRQ 547
++NWE E +WCP F ++TY G R R+
Sbjct: 662 TIINWEREAEQWCPDFYVVTYVGLRDARVVLRE 694
Score = 55 (24.4 bits), Expect = 1.3e-71, Sum P(5) = 1.3e-71
Identities = 17/52 (32%), Positives = 25/52 (48%)
Query: 1449 KEEPSVEPMSIDDDFYDEDATFSDAMSPPSTSQKKRKKAEL--ALYDDEERE 1498
KEEP EPM +D T + A S P+T + + A + + DE +E
Sbjct: 1431 KEEPKEEPMEKED----ATETVNGATSEPATDAESEQNAPVDEPMDTDEAKE 1478
Score = 41 (19.5 bits), Expect = 1.3e-71, Sum P(5) = 1.3e-71
Identities = 10/53 (18%), Positives = 26/53 (49%)
Query: 65 LGQTERYSSMLAENLVDSHKPVQQSPMREQPGIQYKEADENGAEEPGVQSKEA 117
+ + +SS++ +++++ S M ++YKE ++ A + K+A
Sbjct: 106 ISNLKTFSSIIKPQILEANPGTNVSKMYPMFQVKYKEYQDHMAAQGKPVQKQA 158
Score = 37 (18.1 bits), Expect = 2.1e-29, Sum P(4) = 2.1e-29
Identities = 7/24 (29%), Positives = 12/24 (50%)
Query: 790 LDFSMNSWESDELNAIATPASLIK 813
L + +WE D+ N ++IK
Sbjct: 514 LSYDQATWERDDSNIANYEEAIIK 537
>UNIPROTKB|E2QSK6 [details] [associations]
symbol:ERCC6L "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0047485 "protein N-terminus binding"
evidence=IEA] [GO:0045494 "photoreceptor cell maintenance"
evidence=IEA] [GO:0032786 "positive regulation of DNA-dependent
transcription, elongation" evidence=IEA] [GO:0032403 "protein
complex binding" evidence=IEA] [GO:0010332 "response to gamma
radiation" evidence=IEA] [GO:0010224 "response to UV-B"
evidence=IEA] [GO:0010165 "response to X-ray" evidence=IEA]
[GO:0009636 "response to toxic substance" evidence=IEA] [GO:0008630
"intrinsic apoptotic signaling pathway in response to DNA damage"
evidence=IEA] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IEA] [GO:0008023 "transcription elongation factor complex"
evidence=IEA] [GO:0008022 "protein C-terminus binding"
evidence=IEA] [GO:0007257 "activation of JUN kinase activity"
evidence=IEA] [GO:0007256 "activation of JNKK activity"
evidence=IEA] [GO:0006290 "pyrimidine dimer repair" evidence=IEA]
[GO:0006284 "base-excision repair" evidence=IEA] [GO:0006283
"transcription-coupled nucleotide-excision repair" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=IEA] [GO:0000303 "response to superoxide"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0008630 GO:GO:0005730 GO:GO:0006284 GO:GO:0003677
GO:GO:0009636 GO:GO:0003682 GO:GO:0045494 GO:GO:0010332
GO:GO:0004386 GO:GO:0010165 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0010224 GO:GO:0007257 GO:GO:0006283
GO:GO:0008094 GO:GO:0008023 GO:GO:0032786 GO:GO:0006290
GO:GO:0007256 GeneTree:ENSGT00590000083118 CTD:2074 KO:K10841
OMA:NGEMQIF GO:GO:0000303 EMBL:AAEX03015368 RefSeq:XP_534944.2
UniGene:Cfa.1909 Ensembl:ENSCAFT00000010674 GeneID:477747
KEGG:cfa:477747 NextBio:20853169 Uniprot:E2QSK6
Length = 1486
Score = 466 (169.1 bits), Expect = 1.9e-71, Sum P(3) = 1.9e-71
Identities = 124/325 (38%), Positives = 172/325 (52%)
Query: 446 KFPFLLKFPLREYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTIAMLAHLACEK---- 501
K P L L +YQ G+ WL ++ ++ GIL DEMGLGKTI IA LA L+ K
Sbjct: 494 KMPGFLFRKLFKYQQTGVRWLWELHCQQAGGILGDEMGLGKTIQIIAFLAGLSYSKIRTR 553
Query: 502 -------GIWGPHLIVVPTSVMLNWETEFLKWCPAFK--ILTYFGSAKERKFKRQGWLKP 552
G+ GP +IV PT+VM W EF W P F+ IL GS ++K K +
Sbjct: 554 GSNYRFKGL-GPTIIVCPTTVMHQWVKEFHTWWPPFRVAILHETGSYTQKKEKLIRDIA- 611
Query: 553 NSFHVCITTYRLI--IQDSKVFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILL 610
+ + IT+Y I +QD R W Y+ILDE H I+N + F + RI+L
Sbjct: 612 HCHGILITSYSYIRLMQDD--ISRHDWHYVILDEGHKIRNPNAAVTLACKQFRTPHRIIL 669
Query: 611 TGTPLQNDLMELWSLMHFLMPHIFQSHQEFKDWFCNPIS-GMVEGQEKVNKEVVDRLHNV 669
+G+P+QN+L ELWSL F+ P + F + F PI+ G V + + V
Sbjct: 670 SGSPMQNNLRELWSLFDFIFPGKLGTLPVFMEQFSVPITMGGYSNASPVQVKTAYKCACV 729
Query: 670 LR----PFILRRLKRDVEKQL--PMKQEHVIYCRLSKRQRNLYEDFIASSETQATLASAN 723
LR P++LRR+K DV+ L P K E V++CRL++ Q +Y++FI S E L
Sbjct: 730 LRDTINPYLLRRMKSDVKMSLSLPDKNEQVLFCRLTEEQHKVYQNFIDSKEVYRILNGD- 788
Query: 724 FFGMISVIMQLRKVCNHPDLFEGRP 748
+ S ++ LRK+CNHPDLF G P
Sbjct: 789 -MQIFSGLVALRKICNHPDLFSGGP 812
Score = 368 (134.6 bits), Expect = 1.9e-71, Sum P(3) = 1.9e-71
Identities = 82/194 (42%), Positives = 119/194 (61%)
Query: 996 GKLQELAILLRKLKSDGHRALIFTQMTKMLDILEEFISLYGYTYMRLDGSTQPEERQTLM 1055
GK+ + LL+ G R L+F+Q +MLDILE F+ Y+Y+++DG+T RQ L+
Sbjct: 834 GKMIVVESLLKIWHKQGQRVLLFSQSRQMLDILEVFLRAQKYSYLKMDGTTAIASRQPLI 893
Query: 1056 QRFNTNPKIFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQDRCHRIGQTREVH 1115
R+N + IF+F+L+TR GG+G+NL GA+ VI YD DWNP+ D QA++R RIGQ ++V
Sbjct: 894 TRYNEDTSIFVFLLTTRVGGIGVNLTGANRVIIYDPDWNPSTDTQARERAWRIGQKKQVT 953
Query: 1116 IYRLISESTIEENILKKANQKRALDDLVIQSGGYNTEFFKKLDPMELFSGHRTLPMKTMQ 1175
+YRL++ TIEE I + K+ L + V++ FFK D ELF+ T P +
Sbjct: 954 VYRLLTAGTIEEKIYHRQIFKQFLTNRVLKDPKQR-RFFKSNDLYELFT--LTSPGASQS 1010
Query: 1176 KE-KAI--NNGNEV 1186
E AI G+EV
Sbjct: 1011 TETSAIFAGTGSEV 1024
Score = 46 (21.3 bits), Expect = 1.9e-71, Sum P(3) = 1.9e-71
Identities = 26/115 (22%), Positives = 50/115 (43%)
Query: 36 KIEKLVLYKHQMEVDVRKKKALDKQLEFLLGQTE-----RYSSMLAENLVDSHK------ 84
K++ + K+ E ++K A K+L+ +LG E ++S+ E++
Sbjct: 175 KLDSVKRQKYNKEQQLKKITAKQKRLQAILGGVEVQVELDHASLEEEDIEPGPSCLGSML 234
Query: 85 -PVQQSPMREQPGIQYKEADENGAEEPGVQSKEADEDDAEQHSGFEPQL-DAADI 137
P+Q++ E I+ + G + P K+ + + SGFE L D A +
Sbjct: 235 MPIQETAWEEL--IRTGQMTPFGTQIPQKSEKKPRKLMLNEASGFEKYLADQAKL 287
Score = 37 (18.1 bits), Expect = 4.9e-27, Sum P(2) = 4.9e-27
Identities = 14/50 (28%), Positives = 22/50 (44%)
Query: 655 QEKVNKEVVDRLHNVLRPFILRRLKRDVEKQLPMKQEHVIYCRLSKRQRN 704
++ V ++V +H R L DVEK+ + + C S RQ N
Sbjct: 111 EQGVLRQVDSAIHEASRAAQLA----DVEKEYRSVLDDLTSCTTSLRQIN 156
>UNIPROTKB|E1BYA8 [details] [associations]
symbol:ERCC6 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000303 "response to superoxide" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0006283 "transcription-coupled
nucleotide-excision repair" evidence=IEA] [GO:0006284
"base-excision repair" evidence=IEA] [GO:0006290 "pyrimidine dimer
repair" evidence=IEA] [GO:0007256 "activation of JNKK activity"
evidence=IEA] [GO:0007257 "activation of JUN kinase activity"
evidence=IEA] [GO:0008022 "protein C-terminus binding"
evidence=IEA] [GO:0008023 "transcription elongation factor complex"
evidence=IEA] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IEA] [GO:0008630 "intrinsic apoptotic signaling pathway in
response to DNA damage" evidence=IEA] [GO:0009636 "response to
toxic substance" evidence=IEA] [GO:0010165 "response to X-ray"
evidence=IEA] [GO:0010224 "response to UV-B" evidence=IEA]
[GO:0010332 "response to gamma radiation" evidence=IEA] [GO:0032403
"protein complex binding" evidence=IEA] [GO:0032786 "positive
regulation of DNA-dependent transcription, elongation"
evidence=IEA] [GO:0045494 "photoreceptor cell maintenance"
evidence=IEA] [GO:0047485 "protein N-terminus binding"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0008630 GO:GO:0005730 GO:GO:0006284 GO:GO:0003677
GO:GO:0009636 GO:GO:0003682 GO:GO:0010332 GO:GO:0004386
GO:GO:0010165 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0010224 GO:GO:0007257 GO:GO:0006283 GO:GO:0008094
GO:GO:0008023 GO:GO:0032786 GO:GO:0006290 GO:GO:0007256
GeneTree:ENSGT00590000083118 OMA:NGEMQIF GO:GO:0000303
EMBL:AADN02027759 EMBL:AADN02027760 IPI:IPI00592927
Ensembl:ENSGALT00000010107 Uniprot:E1BYA8
Length = 1498
Score = 459 (166.6 bits), Expect = 2.6e-71, Sum P(6) = 2.6e-71
Identities = 127/327 (38%), Positives = 173/327 (52%)
Query: 446 KFP-FLLKFPLREYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTIAMLAHLACEK--- 501
K P FL K L +YQ G+ WL ++ ++ GIL DEMGLGKTI IA LA L+ K
Sbjct: 493 KVPGFLFK-KLFKYQQTGVRWLWELHCQQAGGILGDEMGLGKTIQIIAFLAGLSYSKIRT 551
Query: 502 --------GIWGPHLIVVPTSVMLNWETEFLKWCPAFK--ILTYFGSAKERKFKRQGWLK 551
G+ GP +IV P +VM W EF W P F+ IL GS +K K +
Sbjct: 552 RGSNYRYQGL-GPTVIVCPATVMHQWVKEFHTWWPPFRVAILHETGSYTNKKVKLIREIA 610
Query: 552 PNSFH-VCITTYRLI--IQDSKVFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRI 608
S H + IT+Y I +QD+ W Y+ILDE H I+N + F + RI
Sbjct: 611 --SCHGILITSYSYIRLMQDN--IHSYDWHYVILDEGHKIRNPNAAVTLACKQFRTPHRI 666
Query: 609 LLTGTPLQNDLMELWSLMHFLMPHIFQSHQEFKDWFCNPIS-GMVEGQEKVNKEVVDRLH 667
+L+G+P+QN+L ELWSL F+ P + F + F PI+ G V + +
Sbjct: 667 ILSGSPMQNNLKELWSLFDFVFPGKLGTLPVFMEQFSVPITMGGYSNASPVQVKTAYKCA 726
Query: 668 NVLR----PFILRRLKRDVEKQL--PMKQEHVIYCRLSKRQRNLYEDFIASSETQATLAS 721
VLR P++LRR+K DV+ L P K E V++CRL+ QR +Y++FI S E L
Sbjct: 727 CVLRDAINPYLLRRMKADVKMSLSLPDKNEQVLFCRLTDEQRQVYQNFIDSKEVYQILNG 786
Query: 722 ANFFGMISVIMQLRKVCNHPDLFEGRP 748
+ S ++ LRK+CNHPDLF G P
Sbjct: 787 D--MQVFSGLVALRKICNHPDLFSGGP 811
Score = 377 (137.8 bits), Expect = 2.6e-71, Sum P(6) = 2.6e-71
Identities = 77/169 (45%), Positives = 108/169 (63%)
Query: 996 GKLQELAILLRKLKSDGHRALIFTQMTKMLDILEEFISLYGYTYMRLDGSTQPEERQTLM 1055
GK+ + LL+ GHR L FTQ +ML ILE F+ Y+Y+R+DG+T RQ L+
Sbjct: 835 GKMIVVESLLKIWHKQGHRVLFFTQSRQMLQILEVFLRDRNYSYLRMDGTTTIASRQPLI 894
Query: 1056 QRFNTNPKIFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQDRCHRIGQTREVH 1115
R+N + IF+F+L+TR GG+G+NL GAD VI YD DWNP+ D QA++R RIGQ ++V
Sbjct: 895 TRYNEDKSIFIFLLTTRVGGIGVNLTGADRVIIYDPDWNPSTDTQARERAWRIGQKKQVT 954
Query: 1116 IYRLISESTIEENILKKANQKRALDDLVIQSGGYNTEFFKKLDPMELFS 1164
+YRL++ TIEE I + K+ L + V++ FFK D ELF+
Sbjct: 955 VYRLLTAGTIEEKIYHRQIFKQFLTNRVLKDPKQR-RFFKSNDLYELFT 1002
Score = 62 (26.9 bits), Expect = 2.6e-71, Sum P(6) = 2.6e-71
Identities = 18/63 (28%), Positives = 32/63 (50%)
Query: 23 AVNISKDVKKFWMKIEKLVLYKHQMEVDVRKKKALDKQLEFLLGQTERYSSMLAENLVDS 82
A N +KD+ + K++ + K+ E ++K KA K+L+ +LG TE + D
Sbjct: 164 ATN-NKDINR---KLDSVKRQKYNKEQQLKKIKAKQKRLQAVLGGTEILDKVNEIEFEDD 219
Query: 83 HKP 85
+P
Sbjct: 220 EEP 222
Score = 49 (22.3 bits), Expect = 2.6e-71, Sum P(6) = 2.6e-71
Identities = 30/127 (23%), Positives = 53/127 (41%)
Query: 1797 LTLEFQRELVDSTISFPPRVNLSVYGSDLETSVNKSTRENHHLKDSQVAENRFRDAARAC 1856
L + +R D T+ + S ++S + TR H S+ E + A+
Sbjct: 1032 LKRKLERPADDDTLKGGLHLKKSSSPKYSKSSSSHLTR--HRANSSEAIETS--EEAKGN 1087
Query: 1857 IE--DSLGWAS-SAFPANDAKLRSVPKSQSLGKHKLSLSDSVK--CPKSKLRKTSMEHSE 1911
+E D +A +A A D + K +SL + +SLS S+ S+ K + E E
Sbjct: 1088 LETFDQNSYAKDNAETATDINSVNKSKQESLERADISLSQSLPGGAGSSENAKVTEEEHE 1147
Query: 1912 IQHSSPE 1918
+ + + E
Sbjct: 1148 VANENAE 1154
Score = 41 (19.5 bits), Expect = 3.9e-69, Sum P(6) = 3.9e-69
Identities = 18/78 (23%), Positives = 33/78 (42%)
Query: 28 KDVKKFWMKIEKLVLYKHQMEVDVRKKKALDKQLEFLLGQTERYSSMLAENLVDSHKPVQ 87
K +KK K++K L H ++KK L+ + GQ + S ++ + D H +
Sbjct: 328 KRLKKHLKKLQKHALQVHSKAGIPKEKKNLETT-KLKPGQKD--DSGESDYVPDEHLEPE 384
Query: 88 QSPMREQPGIQYKEADEN 105
E+ + E D +
Sbjct: 385 AVEEEEEQASSHAENDSD 402
Score = 40 (19.1 bits), Expect = 2.9e-70, Sum P(6) = 2.9e-70
Identities = 12/35 (34%), Positives = 16/35 (45%)
Query: 1464 YDEDATFSDAMSPPSTSQKKRKKAELALYDDEERE 1498
+ +DA F P QK+ KK D EE+E
Sbjct: 1210 HHKDAKFEGERIPHLVKQKRYKKE-----DSEEKE 1239
Score = 40 (19.1 bits), Expect = 6.9e-70, Sum P(5) = 6.9e-70
Identities = 20/79 (25%), Positives = 33/79 (41%)
Query: 48 EVDVRKKKALDKQLEFLLGQTERYSSMLAE--NLVDSH-KPVQQSPMREQPGIQYKEADE 104
+ D R KK L K + L Q + + E NL + KP Q+ E + + +
Sbjct: 325 KTDKRLKKHLKKLQKHAL-QVHSKAGIPKEKKNLETTKLKPGQKDDSGESDYVPDEHLEP 383
Query: 105 NGAEEPGVQSKEADEDDAE 123
EE Q+ E+D++
Sbjct: 384 EAVEEEEEQASSHAENDSD 402
Score = 39 (18.8 bits), Expect = 2.6e-71, Sum P(6) = 2.6e-71
Identities = 12/48 (25%), Positives = 25/48 (52%)
Query: 1644 ELIQRYILSVPDNSINEKTSNVGSGKAL-LKVTEDNVRTLLNVAAEQE 1690
+L + + LS PD S +TS + +G ++V + ++ L A+ +
Sbjct: 996 DLYELFTLSSPDVSQGTETSAIFAGTGSDVQVPKHQLKRKLERPADDD 1043
Score = 38 (18.4 bits), Expect = 2.6e-71, Sum P(6) = 2.6e-71
Identities = 8/22 (36%), Positives = 12/22 (54%)
Query: 108 EEPGVQSKEADEDDAEQHSGFE 129
+E V + +DE D E GF+
Sbjct: 472 KERSVAEELSDESDTEFEEGFK 493
Score = 38 (18.4 bits), Expect = 2.9e-70, Sum P(6) = 2.9e-70
Identities = 10/43 (23%), Positives = 17/43 (39%)
Query: 1179 AINNGNEVSLSNADVEAALKCVEDEADYMALKRAEQEEAVDNQ 1221
++N + SL AD+ + K E+E V N+
Sbjct: 1109 SVNKSKQESLERADISLSQSLPGGAGSSENAKVTEEEHEVANE 1151
>UNIPROTKB|E1BPM4 [details] [associations]
symbol:CHD7 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0060324 "face development" evidence=IEA] [GO:0060123
"regulation of growth hormone secretion" evidence=IEA] [GO:0060041
"retina development in camera-type eye" evidence=IEA] [GO:0060021
"palate development" evidence=IEA] [GO:0050890 "cognition"
evidence=IEA] [GO:0048844 "artery morphogenesis" evidence=IEA]
[GO:0048752 "semicircular canal morphogenesis" evidence=IEA]
[GO:0043584 "nose development" evidence=IEA] [GO:0040018 "positive
regulation of multicellular organism growth" evidence=IEA]
[GO:0035116 "embryonic hindlimb morphogenesis" evidence=IEA]
[GO:0030540 "female genitalia development" evidence=IEA]
[GO:0030217 "T cell differentiation" evidence=IEA] [GO:0021545
"cranial nerve development" evidence=IEA] [GO:0008015 "blood
circulation" evidence=IEA] [GO:0007628 "adult walking behavior"
evidence=IEA] [GO:0007605 "sensory perception of sound"
evidence=IEA] [GO:0007512 "adult heart development" evidence=IEA]
[GO:0007417 "central nervous system development" evidence=IEA]
[GO:0003007 "heart morphogenesis" evidence=IEA] [GO:0001701 "in
utero embryonic development" evidence=IEA] [GO:0001501 "skeletal
system development" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001005
InterPro:IPR001650 InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271
Pfam:PF07533 PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298
SMART:SM00490 SMART:SM00592 SMART:SM00717 Pfam:PF00385
GO:GO:0005524 GO:GO:0005634 GO:GO:0003677 GO:GO:0008015
GO:GO:0003007 GO:GO:0050890 GO:GO:0001701 GO:GO:0040018
GO:GO:0007417 GO:GO:0003682 GO:GO:0001501 GO:GO:0060041
GO:GO:0007605 GO:GO:0007512 GO:GO:0004386 GO:GO:0035116
GO:GO:0060324 GO:GO:0060021 GO:GO:0048844 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0030540 GO:GO:0007628 GO:GO:0030217 GO:GO:0048752
InterPro:IPR023780 OMA:TFGVIFD GO:GO:0021545 GO:GO:0043584
GO:GO:0060123 GeneTree:ENSGT00560000077077 EMBL:DAAA02038386
EMBL:DAAA02038387 EMBL:DAAA02038388 IPI:IPI00697020
Ensembl:ENSBTAT00000026607 Uniprot:E1BPM4
Length = 2940
Score = 477 (173.0 bits), Expect = 3.3e-71, Sum P(5) = 3.3e-71
Identities = 117/305 (38%), Positives = 167/305 (54%)
Query: 455 LREYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTIAMLAHLACEKGIWGPHLIVVPTS 514
LREYQ G++WL+ + N ILADEMGLGKTI +I L + KGI GP L++ P S
Sbjct: 918 LREYQLEGVNWLLFNWYNMRNCILADEMGLGKTIQSITFLYEIYL-KGIHGPFLVIAPLS 976
Query: 515 VMLNWETEFLKWCPAFKILTYFGSAKERK--------FKR-QGWLKPNS--FHVCITTYR 563
+ NWE EF W ++ Y GS R+ FK QG + S FH ITT+
Sbjct: 977 TIPNWEREFRTWTE-LNVVVYHGSQASRRTIQLYEMYFKDPQGRVIKGSYKFHAIITTFE 1035
Query: 564 LIIQDSKVFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPLQNDLMELW 623
+I+ D + W+ +++DEAH +KN + + L + + ++LLTGTPLQN + EL+
Sbjct: 1036 MILTDCPELRNIPWRCVVIDEAHRLKNRNCKLLEGLKMMDLEHKVLLTGTPLQNTVEELF 1095
Query: 624 SLMHFLMPHIFQSHQEFKDWFCNPISGMVEGQEKVNKEVVDRLHNVLRPFILRRLKRDVE 683
SL+HFL P F S F F G ++ +E+V K L +L+P +LRRLK DVE
Sbjct: 1096 SLLHFLEPTRFPSETTFMQEF-----GDLKTEEQVQK-----LQAILKPMMLRRLKEDVE 1145
Query: 684 KQLPMKQEHVIYCRLSKRQRNLYEDFIASSETQATLAS--ANFFGMISVIMQLRKVCNHP 741
K L K+E +I L+ Q+ Y + + + AN +++ +M+LRK CNHP
Sbjct: 1146 KNLAPKEETIIEVELTNIQKKYYRAILEKNFAFLSKGGGQANVPNLLNTMMELRKCCNHP 1205
Query: 742 DLFEG 746
L G
Sbjct: 1206 YLING 1210
Score = 377 (137.8 bits), Expect = 3.3e-71, Sum P(5) = 3.3e-71
Identities = 80/163 (49%), Positives = 107/163 (65%)
Query: 985 FPDRRLIQFDCGKLQELAILLRKLKSDGHRALIFTQMTKMLDILEEFISLYGYTYMRLDG 1044
F + +IQ GKL + LL KLK+ GHR LIF+QM + LDILE+++ Y Y R+DG
Sbjct: 1230 FQLQAMIQA-AGKLVLIDKLLPKLKAGGHRVLIFSQMVRCLDILEDYLIQRRYPYERIDG 1288
Query: 1045 STQPEERQTLMQRFNT-NPKIFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQD 1103
+ RQ + RF+ + F+F+L TR+GG+GINL ADT I +DSDWNP D QAQ
Sbjct: 1289 RVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQA 1348
Query: 1104 RCHRIGQTREVHIYRLISESTIEENILKKANQKRALDDLVIQS 1146
RCHRIGQ++ V IYRLI+ ++ E + KA+ K LD V+QS
Sbjct: 1349 RCHRIGQSKSVKIYRLITRNSYEREMFDKASLKLGLDKAVLQS 1391
Score = 60 (26.2 bits), Expect = 3.3e-71, Sum P(5) = 3.3e-71
Identities = 22/73 (30%), Positives = 36/73 (49%)
Query: 1191 ADVEAALKCVEDEADYMALKRAEQE-EAVDNQEFTEEAVGRPEDDELVIEDTVRTDEPTD 1249
A ++ A+ ED+A A A QE E ++ + EE++ + + V+ED + E D
Sbjct: 2868 AGLQGAVGAGEDKAPDKAEGAAFQEDEPLEGSD-AEESLDKTAESS-VLEDEIAQGEELD 2925
Query: 1250 Q--GGCMTANNDN 1260
GG NN+N
Sbjct: 2926 SLDGGDEIENNEN 2938
Score = 44 (20.5 bits), Expect = 3.3e-71, Sum P(5) = 3.3e-71
Identities = 11/49 (22%), Positives = 23/49 (46%)
Query: 90 PMREQPGIQYKEADENGAEEPGVQSKEADEDDAE-----QHSGFEPQLD 133
P++ PG+ ++ + + +P Q + + + QHS EP L+
Sbjct: 465 PLQPHPGLHHQSSPPHPHHQPWAQLHPSPQSTPQKVPVPQHSPSEPFLE 513
Score = 43 (20.2 bits), Expect = 2.0e-69, Sum P(5) = 2.0e-69
Identities = 17/60 (28%), Positives = 28/60 (46%)
Query: 1215 EEAVDNQEFTEEAVGRPEDDELVIEDTVRTDEPTD-QGGCMTA--NND---NGMMLTGND 1268
E VD+ + G ED+E +ED +++E + + G ++ N D N M T D
Sbjct: 2165 EVGVDSGPKSISEKGSEEDEEEKLEDDDKSEESSQPEAGAVSRGKNFDEESNASMSTARD 2224
Score = 39 (18.8 bits), Expect = 2.9e-35, Sum P(4) = 2.9e-35
Identities = 15/51 (29%), Positives = 22/51 (43%)
Query: 1580 NVWSRD-CVPSPDVWLPQEDAILCAVVHEYGPNWSLVSDILYGMTASGYYR 1629
N+ + D C+ W PQ D A H G + S+ I +T + Y R
Sbjct: 1324 NLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKSV--KIYRLITRNSYER 1372
Score = 38 (18.4 bits), Expect = 3.3e-71, Sum P(5) = 3.3e-71
Identities = 8/26 (30%), Positives = 14/26 (53%)
Query: 193 DKVGRESSAEMGEDEAEPTVVEEGHV 218
D GR+S + + E + +V +G V
Sbjct: 726 DAAGRDSPSTTSQSEPQESVDADGPV 751
>ZFIN|ZDB-GENE-070912-179 [details] [associations]
symbol:chd7 "chromodomain helicase DNA binding
protein 7" species:7955 "Danio rerio" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0016817 "hydrolase
activity, acting on acid anhydrides" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0007368 "determination of left/right symmetry"
evidence=IMP] [GO:0001756 "somitogenesis" evidence=IMP] [GO:0060041
"retina development in camera-type eye" evidence=IMP] [GO:0021602
"cranial nerve morphogenesis" evidence=IMP] [GO:0001947 "heart
looping" evidence=IMP] [GO:0030282 "bone mineralization"
evidence=IMP] [GO:0042472 "inner ear morphogenesis" evidence=IMP]
[GO:0014029 "neural crest formation" evidence=IMP]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271 Pfam:PF07533
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
SMART:SM00592 Pfam:PF00385 ZFIN:ZDB-GENE-070912-179 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0001756 GO:GO:0042472
GO:GO:0060041 GO:GO:0004386 GO:GO:0001947 GO:GO:0030282
InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR023780 GeneTree:ENSGT00560000077077
GO:GO:0021602 EMBL:CR450710 GO:GO:0014029 IPI:IPI00493585
Ensembl:ENSDART00000016208 Ensembl:ENSDART00000135230
Uniprot:F1QGL1
Length = 3140
Score = 466 (169.1 bits), Expect = 3.4e-71, Sum P(5) = 3.4e-71
Identities = 119/313 (38%), Positives = 172/313 (54%)
Query: 455 LREYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTIAMLAHLACEKGIWGPHLIVVPTS 514
LREYQ G++WL+ + N ILADEMGLGKTI +I L + KGI GP L++ P S
Sbjct: 1012 LREYQLEGVNWLLFNWYNTRNCILADEMGLGKTIQSITFLYEIYL-KGIHGPFLVIAPLS 1070
Query: 515 VMLNWETEFLKWCPAFKILTYFGSAKERK-------FKR--QGWLKPNS--FHVCITTYR 563
+ NWE EF W ++ Y GS RK + R QG + + FH ITT+
Sbjct: 1071 TIPNWEREFRTWTE-LNVVVYHGSQASRKTIQAYEMYYRDTQGRIIKGAYKFHAVITTFE 1129
Query: 564 LIIQDSKVFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPLQNDLMELW 623
+I+ D + W+ +I+DEAH +KN + + L + + ++LLTGTPLQN + EL+
Sbjct: 1130 MILTDCPELRNVPWRCVIIDEAHRLKNRNCKLLEGLKMMDMEHKVLLTGTPLQNTVEELF 1189
Query: 624 SLMHFLMPHIFQSHQEFKDWFCNPISGMVEGQEKVNKEVVDRLHNVLRPFILRRLKRDVE 683
SL++FL P F S F F G ++ +E+V K L +L+P +LRRLK DVE
Sbjct: 1190 SLLNFLEPDRFPSESTFMQEF-----GDLKTEEQVQK-----LQGILKPMMLRRLKEDVE 1239
Query: 684 KQLPMKQEHVIYCRLSKRQRNLY-----EDFIASSETQATLAS-----ANFFGMISVIMQ 733
K L K+E +I L+ Q+ Y ++F S++ A S +N +++ +M+
Sbjct: 1240 KNLAPKEETIIEVELTNVQKKYYRAILEKNFAFLSKSGAGGGSGGGGGSNVPNLLNTMME 1299
Query: 734 LRKVCNHPDLFEG 746
LRK CNHP L G
Sbjct: 1300 LRKCCNHPYLING 1312
Score = 377 (137.8 bits), Expect = 3.4e-71, Sum P(5) = 3.4e-71
Identities = 81/166 (48%), Positives = 108/166 (65%)
Query: 982 QVYFPDRRLIQFDCGKLQELAILLRKLKSDGHRALIFTQMTKMLDILEEFISLYGYTYMR 1041
Q F + +IQ GKL + LL KLK+ GHR LIF+QM + LDILE+++ Y Y R
Sbjct: 1329 QPEFHLQAMIQA-AGKLVLIDKLLPKLKAGGHRVLIFSQMVRCLDILEDYLIQRRYPYER 1387
Query: 1042 LDGSTQPEERQTLMQRFNT-NPKIFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQ 1100
+DG + RQ + RF+ + F+F+L TR+GG+GINL ADT I +DSDWNP D Q
Sbjct: 1388 IDGRVRGNLRQAAIDRFSRPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQ 1447
Query: 1101 AQDRCHRIGQTREVHIYRLISESTIEENILKKANQKRALDDLVIQS 1146
AQ RCHRIGQ++ V IYRLI+ ++ E + KA+ K LD V+QS
Sbjct: 1448 AQARCHRIGQSKSVKIYRLITRNSYEREMFDKASLKLGLDKAVLQS 1493
Score = 58 (25.5 bits), Expect = 3.4e-71, Sum P(5) = 3.4e-71
Identities = 19/63 (30%), Positives = 29/63 (46%)
Query: 1168 TLPM---KTMQKEKAINNGNEVSLSNADVEAALKCVEDEADYMALKRAEQEEAVDNQEFT 1224
TLP K Q EK + GN++S A + K ED+ + +AE + + F
Sbjct: 2332 TLPSSEDKNAQDEKELPTGNKLSTEKASEDEEEKMDEDDKSEKS-SQAEVGALSERKNFD 2390
Query: 1225 EEA 1227
EE+
Sbjct: 2391 EES 2393
Score = 52 (23.4 bits), Expect = 3.4e-71, Sum P(5) = 3.4e-71
Identities = 23/80 (28%), Positives = 34/80 (42%)
Query: 1758 GQSSKL-LSAALHDANSRQQDDKVSNFDRREDGPVIEQLDLTLEFQRELVDSTISFPPRV 1816
GQ+ + L+ ALH +S S F P TL+ Q EL+ S PR
Sbjct: 2557 GQAQAIDLTKALHSVSS---SSSASAF------PGAMASSATLKAQMELLQPGASSRPRA 2607
Query: 1817 NLSVYGSDLETSVNKSTREN 1836
N S+ ++L + R+N
Sbjct: 2608 NGSLLDTELPNRRKRGRRKN 2627
Score = 48 (22.0 bits), Expect = 3.8e-70, Sum P(4) = 3.8e-70
Identities = 21/80 (26%), Positives = 35/80 (43%)
Query: 1175 QKEKAINNGNEVSLSNADVEAALKCVED-EADYMALKRAEQEEAVDNQEFTEEAVGRPE- 1232
+ +K + + S ADVE A +ED +++ K A+ D+ E + E
Sbjct: 3057 ESDKGPRTNQDPNASVADVETADNTLEDSDSEESQNKTADSSVLDDDLAGPAEEMDSMEG 3116
Query: 1233 --DDELVIEDTVRTDEPTDQ 1250
DDE +D D+P D+
Sbjct: 3117 GMDDE-DDDDDDDDDDPADE 3135
Score = 45 (20.9 bits), Expect = 3.4e-71, Sum P(5) = 3.4e-71
Identities = 34/118 (28%), Positives = 43/118 (36%)
Query: 188 KRYAVDKVGRESSAEMGEDEA---EPTVVE-------EGHVQGNGNDLLAGSKLDTSGSL 237
KRY D R S + G+D A PT E EG V + G K SG
Sbjct: 805 KRYTEDLEFRISDDDDGDDSAGPKSPTTSEQQELPDAEGPVVEKIMGMRMGKKELASGEE 864
Query: 238 VRRCDEIN---GGLSISENHLLDIETSQV-RDTSKKSGASTQKQALYDFSDEQEDGDF 291
+ +E G S DIE + + +K KQAL F E +D F
Sbjct: 865 IE-VEEFYVKFKGFSYLHCRWADIEELEKDKRIQQKIKRFRAKQALSTFVTEMDDEPF 921
Score = 41 (19.5 bits), Expect = 3.9e-68, Sum P(6) = 3.9e-68
Identities = 15/52 (28%), Positives = 22/52 (42%)
Query: 1591 DVWLPQEDAILCAVVHEYGPNWSLVSD--ILYGMTASGY--YRGRYRHPVHC 1638
D+W+PQ V ++ W L +D +L G+ GY Y P C
Sbjct: 1822 DIWIPQP--FHADVPTDW---WDLDADKSLLIGVFKHGYEKYNSMRADPTLC 1868
Score = 39 (18.8 bits), Expect = 1.2e-68, Sum P(6) = 1.2e-68
Identities = 16/50 (32%), Positives = 27/50 (54%)
Query: 1814 PRVNLSVYGS--DLETSVNKSTRENHHLKDSQVAENRFRDAARACIEDSL 1861
PR N S D+ET+ N T E+ DS+ ++N+ D++ ++D L
Sbjct: 3062 PRTNQDPNASVADVETADN--TLED---SDSEESQNKTADSS--VLDDDL 3104
Score = 39 (18.8 bits), Expect = 1.2e-68, Sum P(6) = 1.2e-68
Identities = 17/52 (32%), Positives = 23/52 (44%)
Query: 1698 KHFTALLSSVWRMKSRMGCRQNFSSSRNGLYLGGSFFSSVTQTSCKSTREPA 1749
KH A+L M MG N S G GG+ ++ T T+ S+ E A
Sbjct: 2893 KHAAAMLPL---MLPGMGGLPNMFSL--GSLFGGNLAAAATATNGASSTEQA 2939
Score = 39 (18.8 bits), Expect = 1.7e-35, Sum P(4) = 1.7e-35
Identities = 15/51 (29%), Positives = 22/51 (43%)
Query: 1580 NVWSRD-CVPSPDVWLPQEDAILCAVVHEYGPNWSLVSDILYGMTASGYYR 1629
N+ + D C+ W PQ D A H G + S+ I +T + Y R
Sbjct: 1426 NLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKSV--KIYRLITRNSYER 1474
Score = 38 (18.4 bits), Expect = 3.9e-68, Sum P(6) = 3.9e-68
Identities = 12/46 (26%), Positives = 18/46 (39%)
Query: 1247 PTDQGGCMTANNDNGMMLT---GNDPKEERALTFAAKEDDVDMLAD 1289
PT+ G T N +G+ G K+ + + D LAD
Sbjct: 1722 PTEDGQSRTLTNHSGLSAPVPRGRKGKKGKLPVAQTRMPQADWLAD 1767
Score = 37 (18.1 bits), Expect = 2.3e-70, Sum P(5) = 2.3e-70
Identities = 10/39 (25%), Positives = 17/39 (43%)
Query: 180 DIPLQELLKRYAVDKVGRESSAEMGEDEAEPTVVEEGHV 218
D +Q+ +KR+ + EM ++ P VE V
Sbjct: 893 DKRIQQKIKRFRAKQALSTFVTEMDDEPFNPDYVEVDRV 931
Score = 37 (18.1 bits), Expect = 1.0e-67, Sum P(6) = 1.0e-67
Identities = 9/36 (25%), Positives = 17/36 (47%)
Query: 1449 KEEPSVEPMSIDDDFYDEDATFSDAMSPPSTSQKKR 1484
K+EP E M +++ E T + + P +K+
Sbjct: 2288 KQEPKEEKMEVEEKDVTEFKTDVEQVCPVDGMVEKK 2323
>ZFIN|ZDB-GENE-070228-1 [details] [associations]
symbol:ercc6 "excision repair cross-complementing
rodent repair deficiency, complementation group 6" species:7955
"Danio rerio" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 ZFIN:ZDB-GENE-070228-1 GO:GO:0005524
GO:GO:0003677 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GeneTree:ENSGT00590000083118 CTD:2074 KO:K10841
EMBL:CR762493 IPI:IPI00933448 RefSeq:XP_688972.2
Ensembl:ENSDART00000112380 GeneID:560477 KEGG:dre:560477
NextBio:20883461 Bgee:F1RDN1 Uniprot:F1RDN1
Length = 1390
Score = 449 (163.1 bits), Expect = 3.6e-71, Sum P(4) = 3.6e-71
Identities = 118/323 (36%), Positives = 166/323 (51%)
Query: 446 KFPFLLKFPLREYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTIAMLAHLACEK---- 501
K P L L +YQ G+ W+ ++ ++ GIL DEMGLGKTI IA LA L+ K
Sbjct: 475 KIPGFLWKKLFKYQQTGVRWMWELHCQQAGGILGDEMGLGKTIQIIAFLAGLSYSKLKTR 534
Query: 502 -------GIWGPHLIVVPTSVMLNWETEFLKWCPAFKILTYF--GSAKERKFKRQGWLKP 552
G+ GP +IV P +VM W EF W P F++ GS +K K +
Sbjct: 535 GSNYRYAGL-GPTVIVCPATVMHQWVKEFHTWWPPFRVAVLHDTGSFTSKKEKLIPEIVA 593
Query: 553 NSFHVCITTYRLIIQDSKVFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTG 612
S + IT+Y I +R W Y+ILDE H I+N + F + R +L+G
Sbjct: 594 -SHGILITSYSYIRIMQDYIQRYDWHYVILDEGHKIRNPNAGVTTACKQFRTPHRFILSG 652
Query: 613 TPLQNDLMELWSLMHFLMPHIFQSHQEFKDWFCNPIS-GMVEGQEKVNKEVVDRLHNVLR 671
+P+QN+L ELWSL F+ P + F + F PI+ G V + + VLR
Sbjct: 653 SPMQNNLKELWSLFDFVFPGKLGTLPVFMEQFSVPITMGGYANASPVQVQTAYKCACVLR 712
Query: 672 ----PFILRRLKRDVEKQL--PMKQEHVIYCRLSKRQRNLYEDFIASSETQATLASANFF 725
P++LRR+K DV+ L P K E V++CRL++ QR +Y+ F+ S E L
Sbjct: 713 DTINPYLLRRMKADVKANLSLPDKNEQVLFCRLTEDQRQVYQTFLDSKEVYQILNGD--M 770
Query: 726 GMISVIMQLRKVCNHPDLFEGRP 748
+ S ++ LRK+CNHPDLF G P
Sbjct: 771 QVFSGLIALRKICNHPDLFTGGP 793
Score = 382 (139.5 bits), Expect = 3.6e-71, Sum P(4) = 3.6e-71
Identities = 77/169 (45%), Positives = 111/169 (65%)
Query: 996 GKLQELAILLRKLKSDGHRALIFTQMTKMLDILEEFISLYGYTYMRLDGSTQPEERQTLM 1055
GK+ + LLR GHR L+FTQ +ML+ILE F+ G++Y+++DG+T RQ L+
Sbjct: 817 GKMIVVESLLRLWHKQGHRVLLFTQSRQMLEILEVFVKENGFSYLKMDGTTTIASRQPLI 876
Query: 1056 QRFNTNPKIFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQDRCHRIGQTREVH 1115
+FN N IF+FIL+TR GG+G+NL GA+ V+ YD DWNP+ D QA++R RIGQ ++V
Sbjct: 877 AQFNQNKDIFVFILTTRVGGLGVNLTGANRVVIYDPDWNPSTDTQARERAWRIGQKQQVT 936
Query: 1116 IYRLISESTIEENILKKANQKRALDDLVIQSGGYNTEFFKKLDPMELFS 1164
+YRL++ TIEE I + K+ L + V++ FFK D ELF+
Sbjct: 937 VYRLLTAGTIEEKIYHRQIFKQFLTNRVLKDPKQR-RFFKSNDIYELFT 984
Score = 59 (25.8 bits), Expect = 6.3e-71, Sum P(5) = 6.3e-71
Identities = 20/60 (33%), Positives = 31/60 (51%)
Query: 27 SKDVKKFWMKIEKLVLYKHQMEVDVRKKKALDKQLEFLLGQTERYSSMLAENLV-DSHKP 85
SKD+ + KIE + K E ++K +A K+L+ LL E + AE L+ D +P
Sbjct: 152 SKDISR---KIESVKRQKENKEKQLKKIRAKQKRLQALL-DGEDIQKLEAELLIEDDEEP 207
Score = 56 (24.8 bits), Expect = 3.6e-71, Sum P(4) = 3.6e-71
Identities = 24/93 (25%), Positives = 39/93 (41%)
Query: 43 YKHQMEVDVRKKKALDKQLEFLLGQTERYSSMLAENLV----DSHKPVQQSPMRE--QPG 96
YK + E RK K D+ +++ +E S + D + +R+ +
Sbjct: 389 YKKKKEPKTRKPKKEDESDDYIPSSSEEEDSQKGGKVKKCKDDGDIECYRQRIRKWKRQR 448
Query: 97 IQYKEADENGAEEPGVQSKEADEDDAEQHSGFE 129
++ KEA EE E+DE DAE GF+
Sbjct: 449 LREKEAKREAGEE------ESDESDAEFDEGFK 475
Score = 42 (19.8 bits), Expect = 6.3e-71, Sum P(5) = 6.3e-71
Identities = 11/58 (18%), Positives = 28/58 (48%)
Query: 80 VDSHKPVQQSPMREQPGIQYKEADENGAEEPGVQSKEADEDDAEQHSGFEPQLDAADI 137
VD H+ Q P +++ + ++ + + + S ++E+D+++ + D DI
Sbjct: 378 VDDHEEYQLKPYKKKKEPKTRKPKKEDESDDYIPSS-SEEEDSQKGGKVKKCKDDGDI 434
Score = 40 (19.1 bits), Expect = 3.6e-71, Sum P(4) = 3.6e-71
Identities = 12/35 (34%), Positives = 17/35 (48%)
Query: 1464 YDEDATFSDAMSPPSTSQKKRKKAELALYDDEERE 1498
+ EDA F A +++ KK E DEE+E
Sbjct: 1112 HSEDARFEGARISHLVKKRRYKKEE-----DEEKE 1141
Score = 39 (18.8 bits), Expect = 7.9e-71, Sum P(5) = 7.9e-71
Identities = 8/25 (32%), Positives = 15/25 (60%)
Query: 1644 ELIQRYILSVPDNSINEKTSNVGSG 1668
++ + + LS PD S +TS + +G
Sbjct: 978 DIYELFTLSSPDGSQGTETSAIFAG 1002
Score = 37 (18.1 bits), Expect = 2.1e-70, Sum P(5) = 2.1e-70
Identities = 10/29 (34%), Positives = 14/29 (48%)
Query: 257 DIETSQVRDTSKKSGASTQKQALYDFSDE 285
D E Q++ KK T+K D SD+
Sbjct: 380 DHEEYQLKPYKKKKEPKTRKPKKEDESDD 408
>UNIPROTKB|F1MLB2 [details] [associations]
symbol:CHD8 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=IEA]
[GO:0045945 "positive regulation of transcription from RNA
polymerase III promoter" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043066 "negative regulation of
apoptotic process" evidence=IEA] [GO:0043044 "ATP-dependent
chromatin remodeling" evidence=IEA] [GO:0035064 "methylated histone
residue binding" evidence=IEA] [GO:0030178 "negative regulation of
Wnt receptor signaling pathway" evidence=IEA] [GO:0008094
"DNA-dependent ATPase activity" evidence=IEA] [GO:0008013
"beta-catenin binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003678 "DNA helicase activity" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0002039 "p53 binding"
evidence=IEA] [GO:0001701 "in utero embryonic development"
evidence=IEA] InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271
Pfam:PF07533 PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298
SMART:SM00490 SMART:SM00592 Pfam:PF00385 GO:GO:0005524
GO:GO:0045892 GO:GO:0043066 GO:GO:0003677 GO:GO:0001701
GO:GO:0045944 GO:GO:0045945 GO:GO:0030178 GO:GO:0060070
InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0003678 GO:GO:0043044 GO:GO:0071339
InterPro:IPR023780 GO:GO:0008094 GeneTree:ENSGT00560000077077
OMA:FLAYMED EMBL:DAAA02028315 EMBL:DAAA02028312 EMBL:DAAA02028313
EMBL:DAAA02028314 IPI:IPI01017729 Ensembl:ENSBTAT00000027215
Uniprot:F1MLB2
Length = 2537
Score = 484 (175.4 bits), Expect = 4.3e-71, Sum P(4) = 4.3e-71
Identities = 118/303 (38%), Positives = 171/303 (56%)
Query: 455 LREYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTIAMLAHLACEKGIWGPHLIVVPTS 514
LREYQ G++WL+ + R N ILADEMGLGKTI +IA L + GI GP L++ P S
Sbjct: 764 LREYQLEGVNWLLFNWYNRQNCILADEMGLGKTIQSIAFLQEVY-NVGIHGPFLVIAPLS 822
Query: 515 VMLNWETEFLKWCPAFKILTYFGSAKERKFKRQ---------GWLKPNS--FHVCITTYR 563
+ NWE EF W + Y GS R+ +Q G L P + F ITT+
Sbjct: 823 TITNWEREFNTWTE-MNTIVYHGSLASRQMIQQYEMYCKDSRGRLIPGAYKFDALITTFE 881
Query: 564 LIIQDSKVFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPLQNDLMELW 623
+I+ D + +W+ +I+DEAH +KN + +L + + + ++LLTGTPLQN + EL+
Sbjct: 882 MILSDCPELREIEWRCVIIDEAHRLKNRNCKLLDSLKHMDLEHKVLLTGTPLQNTVEELF 941
Query: 624 SLMHFLMPHIFQSHQEF-KDWFCNPISGMVEGQEKVNKEVVDRLHNVLRPFILRRLKRDV 682
SL+HFL P F S EF KD+ G ++ +E+V K L +L+P +LRRLK DV
Sbjct: 942 SLLHFLEPSQFPSESEFLKDF------GDLKTEEQVQK-----LQAILKPMMLRRLKEDV 990
Query: 683 EKQLPMKQEHVIYCRLSKRQRNLYEDFIASSETQATLASA--NFFGMISVIMQLRKVCNH 740
EK L KQE +I L+ Q+ Y + + + + + N +++ +M+LRK CNH
Sbjct: 991 EKNLAPKQETIIEVELTNIQKKYYRAILEKNFSFLSKGAGHTNMPNLLNTMMELRKCCNH 1050
Query: 741 PDL 743
P L
Sbjct: 1051 PYL 1053
Score = 371 (135.7 bits), Expect = 4.3e-71, Sum P(4) = 4.3e-71
Identities = 75/152 (49%), Positives = 102/152 (67%)
Query: 996 GKLQELAILLRKLKSDGHRALIFTQMTKMLDILEEFISLYGYTYMRLDGSTQPEERQTLM 1055
GKL + LL KLK+ GH+ LIF+QM + LDILE+++ Y Y R+DG + RQ +
Sbjct: 1087 GKLVLIDKLLPKLKAGGHKVLIFSQMVRCLDILEDYLIQRRYLYERIDGRVRGNLRQAAI 1146
Query: 1056 QRFNT-NPKIFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQDRCHRIGQTREV 1114
RF+ + F+F+L TR+GG+GINL ADT I +DSDWNP D QAQ RCHRIGQ++ V
Sbjct: 1147 DRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAV 1206
Query: 1115 HIYRLISESTIEENILKKANQKRALDDLVIQS 1146
+YRLI+ ++ E + KA+ K LD V+QS
Sbjct: 1207 KVYRLITRNSYEREMFDKASLKLGLDKAVLQS 1238
Score = 49 (22.3 bits), Expect = 7.0e-70, Sum P(5) = 7.0e-70
Identities = 24/101 (23%), Positives = 44/101 (43%)
Query: 1790 PVIEQLDLTLEFQRELVDSTISFPPRVNLSVYGSDLETSVNKSTR----ENHHLKDSQVA 1845
P +E L TL+ + E+V + P ++ V SD V++S E+ DS++
Sbjct: 1971 PSLESL--TLKLEHEVVARSRPTPQDYDMRVAPSDTTPLVSRSVPPVKLEDEDDSDSELD 2028
Query: 1846 ENRFRDAARACIEDSLGWASSAFPANDAKLRSVPKSQSLGK 1886
++ ++ + S +SS + D K + QS K
Sbjct: 2029 LSKLSPSSSSSSSSSSS-SSSTDESEDEKEEKLTADQSRSK 2068
Score = 47 (21.6 bits), Expect = 4.3e-71, Sum P(4) = 4.3e-71
Identities = 12/46 (26%), Positives = 22/46 (47%)
Query: 1453 SVEPMSIDDDFYDEDATFSDAMSPPSTSQKKRKKAELALYDDEERE 1498
SV P+ ++D+ D D+ + PS+S + + D+ E E
Sbjct: 2011 SVPPVKLEDED-DSDSELDLSKLSPSSSSSSSSSSSSSSTDESEDE 2055
Score = 45 (20.9 bits), Expect = 2.2e-24, Sum P(5) = 2.2e-24
Identities = 15/59 (25%), Positives = 25/59 (42%)
Query: 627 HFLMPHIFQSHQEFKDWFCN-PISGMVEGQEKVNKEVVDRLHNVLRPFILRRLKRDVEK 684
H MP++ + E + CN P +EK+ E + H + F L+ + R K
Sbjct: 1031 HTNMPNLLNTMMELRKC-CNHPYLINAGAEEKILTEFREACHIIPHDFHLQAMVRSAGK 1088
Score = 39 (18.8 bits), Expect = 2.9e-70, Sum P(4) = 2.9e-70
Identities = 7/34 (20%), Positives = 20/34 (58%)
Query: 1520 DSKLSRKRHDGSTELKTCESIFIDLEQKSASRSK 1553
D+ + + + + ++ + ES+ + LE + +RS+
Sbjct: 1956 DAPVEKPPEETAAQVPSLESLTLKLEHEVVARSR 1989
Score = 39 (18.8 bits), Expect = 1.1e-35, Sum P(5) = 1.1e-35
Identities = 7/14 (50%), Positives = 10/14 (71%)
Query: 892 DILQQKTVRRSYLY 905
DIL+ ++R YLY
Sbjct: 1117 DILEDYLIQRRYLY 1130
Score = 38 (18.4 bits), Expect = 4.3e-71, Sum P(4) = 4.3e-71
Identities = 9/20 (45%), Positives = 12/20 (60%)
Query: 1223 FTEEAVGRPEDDELVIEDTV 1242
F E+A GRP+D + E V
Sbjct: 1610 FLEKA-GRPDDKAIAAEHRV 1628
Score = 37 (18.1 bits), Expect = 4.7e-70, Sum P(4) = 4.7e-70
Identities = 9/35 (25%), Positives = 20/35 (57%)
Query: 1943 EDMDGGRLSCMDQDLSL----ETVLSSEIPHNYFP 1973
+D +G L MD+++S+ E ++ + H ++P
Sbjct: 1660 QDDEGDPLMMMDEEISVIDGDEAQVTQQPGHLFWP 1694
Score = 37 (18.1 bits), Expect = 7.0e-70, Sum P(5) = 7.0e-70
Identities = 8/24 (33%), Positives = 13/24 (54%)
Query: 1725 NGLYLGGSFFSSVTQTSCKSTREP 1748
+G L G+ V+QT C ++P
Sbjct: 1884 DGELLRGAARHGVSQTDCNIMQDP 1907
>UNIPROTKB|F1S8J5 [details] [associations]
symbol:CHD8 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=IEA]
[GO:0045945 "positive regulation of transcription from RNA
polymerase III promoter" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043066 "negative regulation of
apoptotic process" evidence=IEA] [GO:0043044 "ATP-dependent
chromatin remodeling" evidence=IEA] [GO:0035064 "methylated histone
residue binding" evidence=IEA] [GO:0030178 "negative regulation of
Wnt receptor signaling pathway" evidence=IEA] [GO:0008094
"DNA-dependent ATPase activity" evidence=IEA] [GO:0008013
"beta-catenin binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003678 "DNA helicase activity" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0002039 "p53 binding"
evidence=IEA] [GO:0001701 "in utero embryonic development"
evidence=IEA] InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271
Pfam:PF07533 PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298
SMART:SM00490 SMART:SM00592 Pfam:PF00385 GO:GO:0005524
GO:GO:0045892 GO:GO:0043066 GO:GO:0003677 GO:GO:0001701
GO:GO:0045944 GO:GO:0045945 GO:GO:0030178 GO:GO:0060070
InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0003678 GO:GO:0043044 GO:GO:0071339
InterPro:IPR023780 GO:GO:0008094 GeneTree:ENSGT00560000077077
OMA:FLAYMED EMBL:FP340603 Ensembl:ENSSSCT00000002379
ArrayExpress:F1S8J5 Uniprot:F1S8J5
Length = 2569
Score = 484 (175.4 bits), Expect = 4.6e-71, Sum P(4) = 4.6e-71
Identities = 118/303 (38%), Positives = 171/303 (56%)
Query: 455 LREYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTIAMLAHLACEKGIWGPHLIVVPTS 514
LREYQ G++WL+ + R N ILADEMGLGKTI +IA L + GI GP L++ P S
Sbjct: 811 LREYQLEGVNWLLFNWYNRQNCILADEMGLGKTIQSIAFLQEVY-NVGIHGPFLVIAPLS 869
Query: 515 VMLNWETEFLKWCPAFKILTYFGSAKERKFKRQ---------GWLKPNS--FHVCITTYR 563
+ NWE EF W + Y GS R+ +Q G L P + F ITT+
Sbjct: 870 TITNWEREFNTWTE-MNTIVYHGSLASRQMIQQYEMYCKDSRGRLIPGAYKFDALITTFE 928
Query: 564 LIIQDSKVFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPLQNDLMELW 623
+I+ D + +W+ +I+DEAH +KN + +L + + + ++LLTGTPLQN + EL+
Sbjct: 929 MILSDCPELREIEWRCVIIDEAHRLKNRNCKLLDSLKHMDLEHKVLLTGTPLQNTVEELF 988
Query: 624 SLMHFLMPHIFQSHQEF-KDWFCNPISGMVEGQEKVNKEVVDRLHNVLRPFILRRLKRDV 682
SL+HFL P F S EF KD+ G ++ +E+V K L +L+P +LRRLK DV
Sbjct: 989 SLLHFLEPSQFPSESEFLKDF------GDLKTEEQVQK-----LQAILKPMMLRRLKEDV 1037
Query: 683 EKQLPMKQEHVIYCRLSKRQRNLYEDFIASSETQATLASA--NFFGMISVIMQLRKVCNH 740
EK L KQE +I L+ Q+ Y + + + + + N +++ +M+LRK CNH
Sbjct: 1038 EKNLAPKQETIIEVELTNIQKKYYRAILEKNFSFLSKGAGHTNMPNLLNTMMELRKCCNH 1097
Query: 741 PDL 743
P L
Sbjct: 1098 PYL 1100
Score = 371 (135.7 bits), Expect = 4.6e-71, Sum P(4) = 4.6e-71
Identities = 75/152 (49%), Positives = 102/152 (67%)
Query: 996 GKLQELAILLRKLKSDGHRALIFTQMTKMLDILEEFISLYGYTYMRLDGSTQPEERQTLM 1055
GKL + LL KLK+ GH+ LIF+QM + LDILE+++ Y Y R+DG + RQ +
Sbjct: 1134 GKLVLIDKLLPKLKAGGHKVLIFSQMVRCLDILEDYLIQRRYLYERIDGRVRGNLRQAAI 1193
Query: 1056 QRFNT-NPKIFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQDRCHRIGQTREV 1114
RF+ + F+F+L TR+GG+GINL ADT I +DSDWNP D QAQ RCHRIGQ++ V
Sbjct: 1194 DRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAV 1253
Query: 1115 HIYRLISESTIEENILKKANQKRALDDLVIQS 1146
+YRLI+ ++ E + KA+ K LD V+QS
Sbjct: 1254 KVYRLITRNSYEREMFDKASLKLGLDKAVLQS 1285
Score = 47 (21.6 bits), Expect = 4.6e-71, Sum P(4) = 4.6e-71
Identities = 12/46 (26%), Positives = 22/46 (47%)
Query: 1453 SVEPMSIDDDFYDEDATFSDAMSPPSTSQKKRKKAELALYDDEERE 1498
SV P+ ++D+ D D+ + PS+S + + D+ E E
Sbjct: 2058 SVPPVKLEDED-DSDSELDLSKLSPSSSSSSSSSSSSSSTDESEDE 2102
Score = 45 (20.9 bits), Expect = 7.6e-24, Sum P(5) = 7.6e-24
Identities = 15/59 (25%), Positives = 25/59 (42%)
Query: 627 HFLMPHIFQSHQEFKDWFCN-PISGMVEGQEKVNKEVVDRLHNVLRPFILRRLKRDVEK 684
H MP++ + E + CN P +EK+ E + H + F L+ + R K
Sbjct: 1078 HTNMPNLLNTMMELRKC-CNHPYLINAGAEEKILTEFREACHIIPHDFHLQAMVRSAGK 1135
Score = 44 (20.5 bits), Expect = 2.6e-69, Sum P(5) = 2.6e-69
Identities = 23/101 (22%), Positives = 43/101 (42%)
Query: 1790 PVIEQLDLTLEFQRELVDSTISFPPRVNLSVYGSDLETSVNKSTR----ENHHLKDSQVA 1845
P +E L TL+ + E+V + P + V SD V++S E+ DS++
Sbjct: 2018 PSLESL--TLKLEHEVVARSRPTPQDYEMRVAPSDTTPLVSRSVPPVKLEDEDDSDSELD 2075
Query: 1846 ENRFRDAARACIEDSLGWASSAFPANDAKLRSVPKSQSLGK 1886
++ ++ + S +SS + D K + +S K
Sbjct: 2076 LSKLSPSSSSSSSSSSS-SSSTDESEDEKEEKLTADRSRSK 2115
Score = 42 (19.8 bits), Expect = 2.6e-69, Sum P(5) = 2.6e-69
Identities = 16/71 (22%), Positives = 29/71 (40%)
Query: 1898 PKSKLRKTSMEHSEIQHSSPEPVSNQSVATKDANLRFDLIQEAWLEDM--DGGRLSCMDQ 1955
P KL SE+ S P S+ S ++ ++ D ++ E + D R D+
Sbjct: 2060 PPVKLEDEDDSDSELDLSKLSPSSSSSSSSSSSSSSTDESEDEKEEKLTADRSRSKLYDE 2119
Query: 1956 DLSLETVLSSE 1966
+ L +S +
Sbjct: 2120 ESLLSLTMSQD 2130
Score = 39 (18.8 bits), Expect = 2.6e-69, Sum P(5) = 2.6e-69
Identities = 7/34 (20%), Positives = 20/34 (58%)
Query: 1520 DSKLSRKRHDGSTELKTCESIFIDLEQKSASRSK 1553
D+ + + + + ++ + ES+ + LE + +RS+
Sbjct: 2003 DAPVEKPPEETAAQVPSLESLTLKLEHEVVARSR 2036
Score = 39 (18.8 bits), Expect = 4.0e-35, Sum P(5) = 4.0e-35
Identities = 7/14 (50%), Positives = 10/14 (71%)
Query: 892 DILQQKTVRRSYLY 905
DIL+ ++R YLY
Sbjct: 1164 DILEDYLIQRRYLY 1177
Score = 38 (18.4 bits), Expect = 4.6e-71, Sum P(4) = 4.6e-71
Identities = 9/20 (45%), Positives = 12/20 (60%)
Query: 1223 FTEEAVGRPEDDELVIEDTV 1242
F E+A GRP+D + E V
Sbjct: 1657 FLEKA-GRPDDKAIAAEHRV 1675
Score = 37 (18.1 bits), Expect = 5.1e-70, Sum P(4) = 5.1e-70
Identities = 9/35 (25%), Positives = 20/35 (57%)
Query: 1943 EDMDGGRLSCMDQDLSL----ETVLSSEIPHNYFP 1973
+D +G L MD+++S+ E ++ + H ++P
Sbjct: 1707 QDDEGDPLMMMDEEISVIDGDEAQVTQQPGHLFWP 1741
Score = 37 (18.1 bits), Expect = 2.6e-69, Sum P(5) = 2.6e-69
Identities = 8/24 (33%), Positives = 13/24 (54%)
Query: 1725 NGLYLGGSFFSSVTQTSCKSTREP 1748
+G L G+ V+QT C ++P
Sbjct: 1931 DGELLRGAARHGVSQTDCNIMQDP 1954
>ASPGD|ASPL0000052010 [details] [associations]
symbol:AN1255 species:162425 "Emericella nidulans"
[GO:0004003 "ATP-dependent DNA helicase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0031934 "mating-type region
heterochromatin" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0000070
"mitotic sister chromatid segregation" evidence=IEA] [GO:0030466
"chromatin silencing at silent mating-type cassette" evidence=IEA]
[GO:0060303 "regulation of nucleosome density" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 EMBL:BN001308 GO:GO:0003677 EMBL:AACD01000017
GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
InterPro:IPR023779 PROSITE:PS00598 InterPro:IPR025260 Pfam:PF13907
KO:K11367 HOGENOM:HOG000207917 OrthoDB:EOG4TF3TB RefSeq:XP_658859.1
ProteinModelPortal:Q5BDX5 STRING:Q5BDX5
EnsemblFungi:CADANIAT00001368 GeneID:2877029 KEGG:ani:AN1255.2
OMA:GPRRMAI Uniprot:Q5BDX5
Length = 1517
Score = 425 (154.7 bits), Expect = 5.2e-71, Sum P(4) = 5.2e-71
Identities = 110/293 (37%), Positives = 160/293 (54%)
Query: 969 PLLFP-IRPAIVRRQVYFPD--RRLIQFDCGKLQELAILLRKLKSDGHRALIFTQMTKML 1025
P +FP I+ D R LI GK+ L LL KLK DGHR LIF+QM KML
Sbjct: 727 PFMFPSAETKILEGSTRREDVLRALIT-SSGKMMLLDQLLAKLKRDGHRVLIFSQMVKML 785
Query: 1026 DILEEFISLYGYTYMRLDGSTQPEERQTLMQRFNT-NPKIFLFILSTRSGGVGINLVGAD 1084
DIL +++ GYTY RLDG+ R+ ++ +N + F FILSTR+GG+GINL+ AD
Sbjct: 786 DILGDYMEYRGYTYQRLDGTIPSASRRLAIEHYNAPDSSDFAFILSTRAGGLGINLMTAD 845
Query: 1085 TVIFYDSDWNPAMDQQAQDRCHRIGQTREVHIYRLISESTIEENILKKANQKRALDDLVI 1144
TVI +DSDWNP D QA R HRIGQT+ V +YRL+S+ T+EE ++++A K L+ + I
Sbjct: 846 TVILFDSDWNPQADLQAMARAHRIGQTKPVSVYRLVSKDTVEEEVIERARNKLLLEFITI 905
Query: 1145 QSGGYNTEFFKKLDPME-----LFSGHRTLPMKTMQKEKAIN----NGNEVSLSNADVEA 1195
Q G + E + + M L + T + + K + GN+ L D+++
Sbjct: 906 QRGVTDKEASEIQNKMARGGITLGEPNSTDDISRILKRRGQRMFEQTGNQAKLEQLDIDS 965
Query: 1196 ALKCVEDEADYMALKRAEQEEAVDNQEFTE--EAVGRPEDDELVIEDTVRTDE 1246
L A+ ++AE +A +EF + + V DD L +D + ++
Sbjct: 966 VLA----NAELHQTEQAEGIQADGGEEFLKAFDYVDIKVDD-LTWDDIIPKEQ 1013
Score = 416 (151.5 bits), Expect = 5.2e-71, Sum P(4) = 5.2e-71
Identities = 100/303 (33%), Positives = 160/303 (52%)
Query: 449 FLLKFPLREYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTIAMLAHLACEKGIWGPHL 508
FL L+E+Q G++++ + K N +LADEMGLGKT+ T+A ++ L + GP +
Sbjct: 440 FLHNGQLKEFQVKGVNFMAFNWVKNRNVVLADEMGLGKTVQTVAFISWLRHVRRQQGPFV 499
Query: 509 IVVPTSVMLNWETEFLKWCPAFKILTYFGSAKERKFKRQGWL----KPN--SFHVCITTY 562
+VVP S M +W F W P + Y G+ R ++ L P F+V +TTY
Sbjct: 500 VVVPLSTMPSWAETFDNWSPDLNYVVYNGNEASRNVLKEYELMVDGNPRRPKFNVLLTTY 559
Query: 563 RLIIQDSKVFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPLQNDLMEL 622
++ DS + W+++ +DEAH +KN SQ + L FNS R+L+TGTP+QN+L EL
Sbjct: 560 EYVLVDSSFLSQFNWQFMAVDEAHRLKNRDSQLYIKLQEFNSPARLLITGTPIQNNLAEL 619
Query: 623 WSLMHFLMPHIFQSHQEFKDWFCNPISGMVEGQEKVNKEVVDRLHNVLRPFILRRLKRDV 682
+L+ FL P + N + M E ++++ + L + PF+LRR K V
Sbjct: 620 SALLDFLNPGLV-----------NVDADMDLNSEAASEKLAE-LTKAISPFMLRRTKTKV 667
Query: 683 EKQLPMKQEHVIYCRLSKRQRNLYEDFIASSETQATLAS-ANFFGMISVIMQLRKVCNHP 741
E LP K E +I LS Q Y++ + + + +++++M+L+K NHP
Sbjct: 668 ESDLPPKTEKIIRVELSDVQLEYYKNILTKNYAALNEGTKGQKQSLLNIMMELKKASNHP 727
Query: 742 DLF 744
+F
Sbjct: 728 FMF 730
Score = 47 (21.6 bits), Expect = 5.2e-71, Sum P(4) = 5.2e-71
Identities = 12/38 (31%), Positives = 18/38 (47%)
Query: 1585 DCVPSPDV---WLPQEDAILCAVV--HEYGPNWSLVSD 1617
+ +PD W +ED +LC + H YG W + D
Sbjct: 1208 EATKAPDYSCSWGAREDGMLCVGISRHGYGA-WMQIRD 1244
Score = 43 (20.2 bits), Expect = 3.5e-32, Sum P(3) = 3.5e-32
Identities = 20/82 (24%), Positives = 37/82 (45%)
Query: 1513 PVRSPDSDSKL---SRKRHDGSTELKTCESIFIDLEQKSASRSKMGGKISITAMPVKRVL 1569
P P +++K+ S +R D L T + L+Q A + G ++ I + VK +
Sbjct: 727 PFMFPSAETKILEGSTRREDVLRALITSSGKMMLLDQLLAKLKRDGHRVLIFSQMVKMLD 786
Query: 1570 MIKPEKLKKGNVWSR-D-CVPS 1589
++ +G + R D +PS
Sbjct: 787 ILGDYMEYRGYTYQRLDGTIPS 808
Score = 41 (19.5 bits), Expect = 5.2e-71, Sum P(4) = 5.2e-71
Identities = 12/55 (21%), Positives = 23/55 (41%)
Query: 1235 ELVIEDTVRTDEPTDQGGCMTANNDNGMMLTGNDPKEERALTFAAKEDDVDMLAD 1289
ELV ED R + + G +T ++ + K A T + ++ +L +
Sbjct: 1139 ELVREDVARLEALENAGKVLTKKERKAVLFDLHGVKRLNAYTIVERPTEMRVLKE 1193
Score = 39 (18.8 bits), Expect = 9.2e-32, Sum P(3) = 9.2e-32
Identities = 10/46 (21%), Positives = 23/46 (50%)
Query: 1175 QKEKAINNGNEVSLSNADVEAALKCVEDEADYMALKRAEQEEAVDN 1220
++E+ I V++AL+ + D+A + + + EA++N
Sbjct: 1108 REEEVIREARLTERDRDTVKSALREITDKAAELVREDVARLEALEN 1153
>UNIPROTKB|F1PWD8 [details] [associations]
symbol:CHD7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271 Pfam:PF07533
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
SMART:SM00592 SMART:SM00717 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0003682 GO:GO:0004386
InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR023780 OMA:TFGVIFD EMBL:AAEX03015818
EMBL:AAEX03015819 EMBL:AAEX03015820 Ensembl:ENSCAFT00000011497
GeneTree:ENSGT00700000105087 Uniprot:F1PWD8
Length = 2994
Score = 483 (175.1 bits), Expect = 7.7e-71, Sum P(6) = 7.7e-71
Identities = 118/305 (38%), Positives = 168/305 (55%)
Query: 455 LREYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTIAMLAHLACEKGIWGPHLIVVPTS 514
LREYQ G++WL+ + N ILADEMGLGKTI +I L + KGI GP L++ P S
Sbjct: 967 LREYQLEGVNWLLFNWYNMRNCILADEMGLGKTIQSITFLYEIYL-KGIHGPFLVIAPLS 1025
Query: 515 VMLNWETEFLKWCPAFKILTYFGSAKERK--------FKR-QGWLKPNS--FHVCITTYR 563
+ NWE EF W ++ Y GS R+ FK QG + S FH ITT+
Sbjct: 1026 TIPNWEREFRTWTE-LNVVVYHGSQASRRTIQSYEMYFKDPQGRVIKGSYKFHAIITTFE 1084
Query: 564 LIIQDSKVFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPLQNDLMELW 623
+I+ D + W+ +++DEAH +KN + + L + + ++LLTGTPLQN + EL+
Sbjct: 1085 MILTDCPELRNIPWRCVVIDEAHRLKNRNCKLLEGLKMMDLEHKVLLTGTPLQNTVEELF 1144
Query: 624 SLMHFLMPHIFQSHQEFKDWFCNPISGMVEGQEKVNKEVVDRLHNVLRPFILRRLKRDVE 683
SL+HFL P F S F F G ++ +E+V K L +L+P +LRRLK DVE
Sbjct: 1145 SLLHFLEPSRFPSETTFMQEF-----GDLKTEEQVQK-----LQAILKPMMLRRLKEDVE 1194
Query: 684 KQLPMKQEHVIYCRLSKRQRNLYEDFIASSETQATLAS--ANFFGMISVIMQLRKVCNHP 741
K L K+E +I L+ Q+ Y + + T + AN +++ +M+LRK CNHP
Sbjct: 1195 KNLAPKEETIIEVELTNIQKKYYRAILEKNFTFLSKGGGQANVPNLLNTMMELRKCCNHP 1254
Query: 742 DLFEG 746
L G
Sbjct: 1255 YLING 1259
Score = 377 (137.8 bits), Expect = 7.7e-71, Sum P(6) = 7.7e-71
Identities = 80/163 (49%), Positives = 107/163 (65%)
Query: 985 FPDRRLIQFDCGKLQELAILLRKLKSDGHRALIFTQMTKMLDILEEFISLYGYTYMRLDG 1044
F + +IQ GKL + LL KLK+ GHR LIF+QM + LDILE+++ Y Y R+DG
Sbjct: 1279 FQLQAMIQA-AGKLVLIDKLLPKLKAGGHRVLIFSQMVRCLDILEDYLIQRRYPYERIDG 1337
Query: 1045 STQPEERQTLMQRFNT-NPKIFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQD 1103
+ RQ + RF+ + F+F+L TR+GG+GINL ADT I +DSDWNP D QAQ
Sbjct: 1338 RVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQA 1397
Query: 1104 RCHRIGQTREVHIYRLISESTIEENILKKANQKRALDDLVIQS 1146
RCHRIGQ++ V IYRLI+ ++ E + KA+ K LD V+QS
Sbjct: 1398 RCHRIGQSKSVKIYRLITRNSYEREMFDKASLKLGLDKAVLQS 1440
Score = 52 (23.4 bits), Expect = 7.7e-71, Sum P(6) = 7.7e-71
Identities = 26/109 (23%), Positives = 43/109 (39%)
Query: 1165 GHRTLPMKTMQKEKAINNGNEVSLSNADVEAALKCVEDEADYMALKRAEQEEAVDNQEFT 1224
G + + T +K + + EV D + C E EA + + E D +
Sbjct: 2174 GEESGSVATQEKTEGKEDDEEVDGGEKDSKQG--C-EAEAGSVRSELKGMEVTADTGPKS 2230
Query: 1225 EEAVGRPEDDELVIEDTVRTDEPTDQGGCMTA--NND---NGMMLTGND 1268
G ED+E +ED +++E + G ++ N D N M T D
Sbjct: 2231 ISEKGSEEDEEEKLEDDDKSEESSQLEGAVSRGKNFDEESNASMSTARD 2279
Score = 48 (22.0 bits), Expect = 7.7e-71, Sum P(6) = 7.7e-71
Identities = 12/49 (24%), Positives = 24/49 (48%)
Query: 90 PMREQPGIQYKEADENGAEEPGVQSKEADEDDAE-----QHSGFEPQLD 133
PM+ PG+ ++ + + +P Q + ++ + QHS EP L+
Sbjct: 515 PMQPHPGLHHQSSPPHPHHQPWAQLHPSPQNTPQKVPVPQHSPSEPFLE 563
Score = 42 (19.8 bits), Expect = 7.7e-71, Sum P(6) = 7.7e-71
Identities = 9/26 (34%), Positives = 14/26 (53%)
Query: 193 DKVGRESSAEMGEDEAEPTVVEEGHV 218
D GR+S + + E + +V EG V
Sbjct: 775 DTAGRDSPSNTSQSEQQESVDAEGPV 800
Score = 41 (19.5 bits), Expect = 7.7e-71, Sum P(6) = 7.7e-71
Identities = 15/55 (27%), Positives = 25/55 (45%)
Query: 1812 FPPRVNL-SVYGSDLETSVNKST----RENHHLKDSQVAENRFRDAARACIEDSL 1861
FP L + GS E + +K+ +E +L+ S EN + A + ED +
Sbjct: 2918 FPALAGLQNAVGSGEEKAPDKAEGGAFQEEENLEGSDAEENLDKTAESSIFEDEM 2972
Score = 39 (18.8 bits), Expect = 8.0e-36, Sum P(5) = 8.0e-36
Identities = 15/51 (29%), Positives = 22/51 (43%)
Query: 1580 NVWSRD-CVPSPDVWLPQEDAILCAVVHEYGPNWSLVSDILYGMTASGYYR 1629
N+ + D C+ W PQ D A H G + S+ I +T + Y R
Sbjct: 1373 NLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKSV--KIYRLITRNSYER 1421
Score = 39 (18.8 bits), Expect = 8.2e-26, Sum P(4) = 8.2e-26
Identities = 5/20 (25%), Positives = 11/20 (55%)
Query: 503 IWGPHLIVVPTSVMLNWETE 522
+WGP + VP + ++ +
Sbjct: 144 MWGPRAVQVPDQIRAPYQQQ 163
Score = 38 (18.4 bits), Expect = 2.0e-70, Sum P(6) = 2.0e-70
Identities = 9/28 (32%), Positives = 15/28 (53%)
Query: 192 VDKVGRESSAEMGEDEAEPTVVEEGHVQ 219
V+K+ S + +D E VEE +V+
Sbjct: 801 VEKIMSSRSVKKQKDSGEEVEVEEFYVK 828
>UNIPROTKB|E2QUS7 [details] [associations]
symbol:CHD8 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271 Pfam:PF07533
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
SMART:SM00592 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
GeneTree:ENSGT00560000077077 OMA:FLAYMED EMBL:AAEX03009852
Ensembl:ENSCAFT00000009065 Uniprot:E2QUS7
Length = 2586
Score = 484 (175.4 bits), Expect = 9.8e-71, Sum P(4) = 9.8e-71
Identities = 118/303 (38%), Positives = 171/303 (56%)
Query: 455 LREYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTIAMLAHLACEKGIWGPHLIVVPTS 514
LREYQ G++WL+ + R N ILADEMGLGKTI +IA L + GI GP L++ P S
Sbjct: 811 LREYQLEGVNWLLFNWYNRQNCILADEMGLGKTIQSIAFLQEVY-NVGIHGPFLVIAPLS 869
Query: 515 VMLNWETEFLKWCPAFKILTYFGSAKERKFKRQ---------GWLKPNS--FHVCITTYR 563
+ NWE EF W + Y GS R+ +Q G L P + F ITT+
Sbjct: 870 TITNWEREFNTWTE-MNTIVYHGSLASRQMIQQYEMYCKDSRGRLIPGAYKFDALITTFE 928
Query: 564 LIIQDSKVFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPLQNDLMELW 623
+I+ D + +W+ +I+DEAH +KN + +L + + + ++LLTGTPLQN + EL+
Sbjct: 929 MILSDCPELREIEWRCVIIDEAHRLKNRNCKLLDSLKHMDLEHKVLLTGTPLQNTVEELF 988
Query: 624 SLMHFLMPHIFQSHQEF-KDWFCNPISGMVEGQEKVNKEVVDRLHNVLRPFILRRLKRDV 682
SL+HFL P F S EF KD+ G ++ +E+V K L +L+P +LRRLK DV
Sbjct: 989 SLLHFLEPSQFPSESEFLKDF------GDLKTEEQVQK-----LQAILKPMMLRRLKEDV 1037
Query: 683 EKQLPMKQEHVIYCRLSKRQRNLYEDFIASSETQATLASA--NFFGMISVIMQLRKVCNH 740
EK L KQE +I L+ Q+ Y + + + + + N +++ +M+LRK CNH
Sbjct: 1038 EKNLAPKQETIIEVELTNIQKKYYRAILEKNFSFLSKGAGHTNMPNLLNTMMELRKCCNH 1097
Query: 741 PDL 743
P L
Sbjct: 1098 PYL 1100
Score = 371 (135.7 bits), Expect = 9.8e-71, Sum P(4) = 9.8e-71
Identities = 75/152 (49%), Positives = 102/152 (67%)
Query: 996 GKLQELAILLRKLKSDGHRALIFTQMTKMLDILEEFISLYGYTYMRLDGSTQPEERQTLM 1055
GKL + LL KLK+ GH+ LIF+QM + LDILE+++ Y Y R+DG + RQ +
Sbjct: 1134 GKLVLIDKLLPKLKAGGHKVLIFSQMVRCLDILEDYLIQRRYLYERIDGRVRGNLRQAAI 1193
Query: 1056 QRFNT-NPKIFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQDRCHRIGQTREV 1114
RF+ + F+F+L TR+GG+GINL ADT I +DSDWNP D QAQ RCHRIGQ++ V
Sbjct: 1194 DRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAV 1253
Query: 1115 HIYRLISESTIEENILKKANQKRALDDLVIQS 1146
+YRLI+ ++ E + KA+ K LD V+QS
Sbjct: 1254 KVYRLITRNSYEREMFDKASLKLGLDKAVLQS 1285
Score = 45 (20.9 bits), Expect = 7.9e-24, Sum P(5) = 7.9e-24
Identities = 15/59 (25%), Positives = 25/59 (42%)
Query: 627 HFLMPHIFQSHQEFKDWFCN-PISGMVEGQEKVNKEVVDRLHNVLRPFILRRLKRDVEK 684
H MP++ + E + CN P +EK+ E + H + F L+ + R K
Sbjct: 1078 HTNMPNLLNTMMELRKC-CNHPYLINAGAEEKILTEFREACHIIPHDFHLQAMVRSAGK 1135
Score = 44 (20.5 bits), Expect = 9.8e-71, Sum P(4) = 9.8e-71
Identities = 11/46 (23%), Positives = 22/46 (47%)
Query: 1453 SVEPMSIDDDFYDEDATFSDAMSPPSTSQKKRKKAELALYDDEERE 1498
+V P+ ++D+ D D+ + PS+S + + D+ E E
Sbjct: 2060 NVPPVKLEDED-DSDSELDLSKLSPSSSSSSSSSSSSSSTDESEDE 2104
Score = 42 (19.8 bits), Expect = 2.7e-69, Sum P(5) = 2.7e-69
Identities = 16/71 (22%), Positives = 29/71 (40%)
Query: 1898 PKSKLRKTSMEHSEIQHSSPEPVSNQSVATKDANLRFDLIQEAWLEDM--DGGRLSCMDQ 1955
P KL SE+ S P S+ S ++ ++ D ++ E + D R D+
Sbjct: 2062 PPVKLEDEDDSDSELDLSKLSPSSSSSSSSSSSSSSTDESEDEKEEKLSADRSRSKLYDE 2121
Query: 1956 DLSLETVLSSE 1966
+ L +S +
Sbjct: 2122 ESLLSLTMSQD 2132
Score = 41 (19.5 bits), Expect = 6.1e-69, Sum P(5) = 6.1e-69
Identities = 22/101 (21%), Positives = 43/101 (42%)
Query: 1790 PVIEQLDLTLEFQRELVDSTISFPPRVNLSVYGSDLETSVNKSTR----ENHHLKDSQVA 1845
P +E L TL+ + E+V + P + V SD V+++ E+ DS++
Sbjct: 2020 PSLESL--TLKLEHEVVARSRPTPQDYEMRVAPSDTTPLVSRNVPPVKLEDEDDSDSELD 2077
Query: 1846 ENRFRDAARACIEDSLGWASSAFPANDAKLRSVPKSQSLGK 1886
++ ++ + S +SS + D K + +S K
Sbjct: 2078 LSKLSPSSSSSSSSSSS-SSSTDESEDEKEEKLSADRSRSK 2117
Score = 39 (18.8 bits), Expect = 2.7e-69, Sum P(5) = 2.7e-69
Identities = 7/34 (20%), Positives = 20/34 (58%)
Query: 1520 DSKLSRKRHDGSTELKTCESIFIDLEQKSASRSK 1553
D+ + + + + ++ + ES+ + LE + +RS+
Sbjct: 2005 DAPVEKPPEETAAQVPSLESLTLKLEHEVVARSR 2038
Score = 39 (18.8 bits), Expect = 4.2e-35, Sum P(5) = 4.2e-35
Identities = 7/14 (50%), Positives = 10/14 (71%)
Query: 892 DILQQKTVRRSYLY 905
DIL+ ++R YLY
Sbjct: 1164 DILEDYLIQRRYLY 1177
Score = 38 (18.4 bits), Expect = 9.8e-71, Sum P(4) = 9.8e-71
Identities = 9/20 (45%), Positives = 12/20 (60%)
Query: 1223 FTEEAVGRPEDDELVIEDTV 1242
F E+A GRP+D + E V
Sbjct: 1659 FLEKA-GRPDDKAIAAEHRV 1677
Score = 37 (18.1 bits), Expect = 5.3e-70, Sum P(4) = 5.3e-70
Identities = 9/35 (25%), Positives = 20/35 (57%)
Query: 1943 EDMDGGRLSCMDQDLSL----ETVLSSEIPHNYFP 1973
+D +G L MD+++S+ E ++ + H ++P
Sbjct: 1709 QDDEGDPLMMMDEEISVIDGDEAQVTQQPGHLFWP 1743
Score = 37 (18.1 bits), Expect = 4.8e-69, Sum P(5) = 4.8e-69
Identities = 8/24 (33%), Positives = 13/24 (54%)
Query: 1725 NGLYLGGSFFSSVTQTSCKSTREP 1748
+G L G+ V+QT C ++P
Sbjct: 1933 DGELLRGAARHGVSQTDCNIMQDP 1956
>SGD|S000000017 [details] [associations]
symbol:FUN30 "Snf2p family member with ATP-dependent
chromatin remodeling activity" species:4932 "Saccharomyces
cerevisiae" [GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0070870
"heterochromatin maintenance involved in chromatin silencing"
evidence=IGI;IMP] [GO:0006974 "response to DNA damage stimulus"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA;IDA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0000729 "DNA double-strand break
processing" evidence=IMP] [GO:0031934 "mating-type region
heterochromatin" evidence=IPI] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IMP;IDA] [GO:0003682 "chromatin binding" evidence=IDA]
[GO:0043044 "ATP-dependent chromatin remodeling" evidence=IMP]
[GO:0000775 "chromosome, centromeric region" evidence=IDA]
[GO:0005694 "chromosome" evidence=IEA] [GO:0000183 "chromatin
silencing at rDNA" evidence=IMP] [GO:0006348 "chromatin silencing
at telomere" evidence=IMP] [GO:0030466 "chromatin silencing at
silent mating-type cassette" evidence=IMP] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0070869 "heterochromatin assembly
involved in chromatin silencing" evidence=IMP] [GO:0006281 "DNA
repair" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
SGD:S000000017 GO:GO:0005739 GO:GO:0005524 GO:GO:0005634
GO:GO:0000775 EMBL:L05146 EMBL:BK006935 GO:GO:0003677 GO:GO:0003682
GO:GO:0030466 GO:GO:0000183 GO:GO:0006348 GO:GO:0004386
GO:GO:0031934 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0043044 GO:GO:0070869 GO:GO:0000729
GO:GO:0008094 OrthoDB:EOG4BCHW4 KO:K14439 HOGENOM:HOG000195581
PIR:S22266 RefSeq:NP_009383.1 ProteinModelPortal:P31380 SMR:P31380
DIP:DIP-2541N IntAct:P31380 MINT:MINT-425278 STRING:P31380
PaxDb:P31380 PeptideAtlas:P31380 EnsemblFungi:YAL019W GeneID:851214
KEGG:sce:YAL019W CYGD:YAL019w GeneTree:ENSGT00630000089890
OMA:KIEPYYG NextBio:968097 Genevestigator:P31380 GermOnline:YAL019W
GO:GO:0070870 Uniprot:P31380
Length = 1131
Score = 479 (173.7 bits), Expect = 1.6e-70, Sum P(3) = 1.6e-70
Identities = 106/271 (39%), Positives = 161/271 (59%)
Query: 448 PFLL--KFPLREYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTIAMLAHLACEKGIWG 505
P LL + L++YQ G++WL +Y+ +++ ILAD+MGLGKT I+ A+L + G
Sbjct: 563 PRLLSPEISLKDYQQTGINWLNLLYQNKMSCILADDMGLGKTCQVISFFAYLK-QINEPG 621
Query: 506 PHLIVVPTSVMLNWETEFLKWCPAFKILTYFGSAKERKFKRQGWLKPNS--FHVCITTYR 563
PHL+VVP+S + NW EF K+ PA KI Y+GS +ER+ R L+ N+ + V +TTY
Sbjct: 622 PHLVVVPSSTLENWLREFQKFAPALKIEPYYGSLQEREELRD-ILERNAGKYDVIVTTYN 680
Query: 564 LII---QDSKVFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPLQNDLM 620
L D K + + ++ DE H++KN S+R+ L+ + R+LLTGTPLQN+L
Sbjct: 681 LAAGNKYDVSFLKNRNFNVVVYDEGHMLKNSTSERFAKLMKIRANFRLLLTGTPLQNNLK 740
Query: 621 ELWSLMHFLMPHIFQSHQEFKDWFCNPISGMVEGQEKVN----KEVVDRLHNVLRPFILR 676
EL SL+ F+MP++F S +E D + + + N +E + R +++PFILR
Sbjct: 741 ELMSLLEFIMPNLFISKKESFDAIFKQRAKTTDDNKNHNPLLAQEAITRAKTMMKPFILR 800
Query: 677 RLKRDVEKQLPMKQEHVIYCRLSKRQRNLYE 707
R K V K LP K H+ YC L+ Q+ +Y+
Sbjct: 801 RRKDQVLKHLPPKHTHIQYCELNAIQKKIYD 831
Score = 332 (121.9 bits), Expect = 1.6e-70, Sum P(3) = 1.6e-70
Identities = 71/149 (47%), Positives = 100/149 (67%)
Query: 996 GKLQELAILLRKLKSDGH-RALIFTQMTKMLDILEEFISLYGYTYMRLDGSTQPEERQTL 1054
GK+ L LL+ + D + LIF+ T++LDILE +S Y ++RLDGSTQ +RQ L
Sbjct: 949 GKIDALKKLLKTIIVDKQEKVLIFSLFTQVLDILEMVLSTLDYKFLRLDGSTQVNDRQLL 1008
Query: 1055 MQRFNTNPKIFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQDRCHRIGQTREV 1114
+ +F + I +FILST++GG GINLV A+ VI +D +NP D+QA DR HR+GQT+EV
Sbjct: 1009 IDKFYEDKDIPIFILSTKAGGFGINLVCANNVIIFDQSFNPHDDRQAADRAHRVGQTKEV 1068
Query: 1115 HIYRLISESTIEENILKKANQKRALDDLV 1143
+I LI++ +IEE I + A K ALD +
Sbjct: 1069 NITTLITKDSIEEKIHQLAKNKLALDSYI 1097
Score = 107 (42.7 bits), Expect = 4.8e-31, Sum P(3) = 4.8e-31
Identities = 32/98 (32%), Positives = 44/98 (44%)
Query: 660 KEVVDRLHNVLRPFILRRLKRDVEKQLPMKQEHVIYCRLSKRQRNLYED----------F 709
+E + R +++PFILRR K V K LP K H+ YC L+ Q+ +Y+
Sbjct: 784 QEAITRAKTMMKPFILRRRKDQVLKHLPPKHTHIQYCELNAIQKKIYDKEIQIVLEHKRM 843
Query: 710 IASSETQATLASANFFGMIS---VIMQLRKVCNHPDLF 744
I E + S +IM LRK HP LF
Sbjct: 844 IKDGELPKDAKEKSKLQSSSSKNLIMALRKASLHPLLF 881
Score = 53 (23.7 bits), Expect = 1.6e-70, Sum P(3) = 1.6e-70
Identities = 14/43 (32%), Positives = 20/43 (46%)
Query: 80 VDSHKPVQQSPMREQPGIQYKEADEN-GAEEPGVQSKEADEDD 121
VD + P E Y+E DE+ EE V+ + D+DD
Sbjct: 486 VDLEAIDDELPQSEHEDDDYEEEDEDYNDEEEDVEYDDGDDDD 528
Score = 42 (19.8 bits), Expect = 2.3e-69, Sum P(3) = 2.3e-69
Identities = 11/36 (30%), Positives = 21/36 (58%)
Query: 100 KEADENGAEEPGVQSKEADEDDA--EQHSGFEPQLD 133
+ A++N EE +S D+DDA + ++ PQ++
Sbjct: 245 RHANDNDEEEE--ESMMTDDDDASGDDYTESTPQIN 278
>SGD|S000003796 [details] [associations]
symbol:RAD26 "Protein involved in transcription-coupled
nucleotide excision repair" species:4932 "Saccharomyces cerevisiae"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0006974
"response to DNA damage stimulus" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0006283
"transcription-coupled nucleotide-excision repair"
evidence=IGI;IMP] [GO:0006289 "nucleotide-excision repair"
evidence=IGI] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 SGD:S000003796 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 EMBL:BK006943 GO:GO:0003677
GO:GO:0004386 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0006283 GO:GO:0008094
GeneTree:ENSGT00590000083118 HOGENOM:HOG000170952 KO:K10841
EMBL:X81635 EMBL:L26910 EMBL:Z49535 PIR:JC2227 RefSeq:NP_012569.1
ProteinModelPortal:P40352 SMR:P40352 DIP:DIP-3008N IntAct:P40352
MINT:MINT-439055 STRING:P40352 PaxDb:P40352 PeptideAtlas:P40352
EnsemblFungi:YJR035W GeneID:853492 KEGG:sce:YJR035W CYGD:YJR035w
OMA:DENRIME OrthoDB:EOG44TSGZ NextBio:974125 Genevestigator:P40352
GermOnline:YJR035W Uniprot:P40352
Length = 1085
Score = 355 (130.0 bits), Expect = 1.7e-70, Sum P(4) = 1.7e-70
Identities = 92/247 (37%), Positives = 139/247 (56%)
Query: 996 GKLQELAILLRKLKSDGHRALIFTQMTKMLDILEEFIS-----LYGYTYMRLDGSTQPEE 1050
GK+Q + LL G++AL+FTQ +MLDILEEFIS L Y+R+DG+T +
Sbjct: 651 GKMQVVKQLLLLWHKQGYKALLFTQSRQMLDILEEFISTKDPDLSHLNYLRMDGTTNIKG 710
Query: 1051 RQTLMQRFNTNPKIFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQDRCHRIGQ 1110
RQ+L+ RFN N +F+L+TR GG+G+NL GA+ +I +D DWNP+ D QA++R RIGQ
Sbjct: 711 RQSLVDRFN-NESFDVFLLTTRVGGLGVNLTGANRIIIFDPDWNPSTDMQARERAWRIGQ 769
Query: 1111 TREVHIYRLISESTIEENILKKANQKRALDDLVIQSGGYNTEFFKKLDPMELFSGHRTLP 1170
REV IYRL+ +IEE I + K+ L + ++ + FFK + +LFS
Sbjct: 770 KREVSIYRLMVGGSIEEKIYHRQIFKQFLTNRIL-TDPKQKRFFKIHELHDLFSLGGENG 828
Query: 1171 MKTMQKEKAINNGNEVSLSNADVEAALKCVEDEADYMALKRAEQEEAVDNQEFTEEAVGR 1230
T + + + E +L N+ E + +D + L + E+ N + +E +
Sbjct: 829 YSTEELNEEVQKHTE-NLKNSKSEES----DDFEQLVNLSGVSKLESFYNGKEKKEN-SK 882
Query: 1231 PEDDELV 1237
EDD L+
Sbjct: 883 TEDDRLI 889
Score = 332 (121.9 bits), Expect = 1.7e-70, Sum P(4) = 1.7e-70
Identities = 79/198 (39%), Positives = 114/198 (57%)
Query: 556 HVCITTY-RLIIQDSKVFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTP 614
H+ ITTY L I K+ K KW+Y +LDE H I+N S+ T + RI+L+GTP
Sbjct: 442 HILITTYVGLRIHSDKLLK-VKWQYAVLDEGHKIRNPDSEISLTCKKLKTHNRIILSGTP 500
Query: 615 LQNDLMELWSLMHFLMPHIFQSHQEFKDWFCNPIS--GMVEG---QEKVNKEVVDRLHNV 669
+QN+L ELWSL F+ P + F+ F PI+ G Q + + L ++
Sbjct: 501 IQNNLTELWSLFDFIFPGKLGTLPVFQQQFVIPINIGGYANATNIQVQTGYKCAVALRDL 560
Query: 670 LRPFILRRLKRDVEKQLPMKQEHVIYCRLSKRQRNLYEDFIASSE-TQATLASAN-FFGM 727
+ P++LRR+K DV K LP K+E V++C+L+K QR+ Y +F+ SS+ Q N FG
Sbjct: 561 ISPYLLRRVKADVAKDLPQKKEMVLFCKLTKYQRSKYLEFLHSSDLNQIQNGKRNVLFG- 619
Query: 728 ISVIMQLRKVCNHPDLFE 745
I + LRK+CNHPDL +
Sbjct: 620 IDI---LRKICNHPDLLD 634
Score = 180 (68.4 bits), Expect = 1.7e-70, Sum P(4) = 1.7e-70
Identities = 44/104 (42%), Positives = 56/104 (53%)
Query: 446 KFPFLLKFPLREYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTIAMLAHLACEKGIWG 505
K P + L YQ + WL +Y++ GI+ DEMGLGKTI IA +A L + G
Sbjct: 288 KIPGEIYSLLFNYQKTCVQWLYELYQQNCGGIIGDEMGLGKTIQVIAFIAALHHSGLLTG 347
Query: 506 PHLIVVPTSVMLNWETEFLKWCPAFK--ILTYFGS--AKERKFK 545
P LIV P +VM W EF W P + IL GS A ++KFK
Sbjct: 348 PVLIVCPATVMKQWCNEFQHWWPPLRTVILHSMGSGMASDQKFK 391
Score = 52 (23.4 bits), Expect = 2.8e-09, Sum P(4) = 2.8e-09
Identities = 21/73 (28%), Positives = 32/73 (43%)
Query: 1151 TEFFKKLDPMELFSGHR-TLPMKTMQKEKAINNGNEVSLSNADVEAALKCVEDEADYMA- 1208
TE + D +F G TLP+ Q IN G + +N V+ KC D ++
Sbjct: 506 TELWSLFD--FIFPGKLGTLPVFQQQFVIPINIGGYANATNIQVQTGYKCAVALRDLISP 563
Query: 1209 --LKRAEQEEAVD 1219
L+R + + A D
Sbjct: 564 YLLRRVKADVAKD 576
Score = 51 (23.0 bits), Expect = 1.7e-70, Sum P(4) = 1.7e-70
Identities = 16/46 (34%), Positives = 23/46 (50%)
Query: 251 SENHLLDIETSQVRDTSKKSGASTQK-QALYDFSDEQEDGDFVVAT 295
+E L I T ++ K+G S Y +DEQ+D DF +AT
Sbjct: 140 TEKEFL-IRTGKITAFGHKAGFSLDTANREYAKNDEQKDEDFEMAT 184
Score = 47 (21.6 bits), Expect = 2.1e-38, Sum P(4) = 2.1e-38
Identities = 15/64 (23%), Positives = 31/64 (48%)
Query: 1515 RSPDSDSKLSRKRHDGSTELKTCESIFIDLEQKSAS----RSKMGGKISITAMPVKRVLM 1570
+ PD S L+ R DG+T +K +S+ +S +++GG + + R+++
Sbjct: 690 KDPDL-SHLNYLRMDGTTNIKGRQSLVDRFNNESFDVFLLTTRVGG-LGVNLTGANRIII 747
Query: 1571 IKPE 1574
P+
Sbjct: 748 FDPD 751
Score = 37 (18.1 bits), Expect = 4.9e-69, Sum P(4) = 4.9e-69
Identities = 11/46 (23%), Positives = 19/46 (41%)
Query: 81 DSHKPVQQSPMREQPGIQYKEADENGAEEPGVQSKEADEDDAEQHS 126
D K EQ + D+N +++ S + EDD E+ +
Sbjct: 173 DEQKDEDFEMATEQMVENLTDEDDNLSDQDYQMSGKESEDDEEEEN 218
>UNIPROTKB|F1NSG3 [details] [associations]
symbol:CHD7 "Chromodomain-helicase-DNA-binding protein 7"
species:9031 "Gallus gallus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0008015 "blood circulation" evidence=IEA] [GO:0021545 "cranial
nerve development" evidence=IEA] [GO:0030217 "T cell
differentiation" evidence=IEA] [GO:0030540 "female genitalia
development" evidence=IEA] [GO:0035116 "embryonic hindlimb
morphogenesis" evidence=IEA] [GO:0040018 "positive regulation of
multicellular organism growth" evidence=IEA] [GO:0043584 "nose
development" evidence=IEA] [GO:0048752 "semicircular canal
morphogenesis" evidence=IEA] [GO:0048844 "artery morphogenesis"
evidence=IEA] [GO:0050890 "cognition" evidence=IEA] [GO:0060021
"palate development" evidence=IEA] [GO:0060041 "retina development
in camera-type eye" evidence=IEA] [GO:0060123 "regulation of growth
hormone secretion" evidence=IEA] [GO:0060324 "face development"
evidence=IEA] [GO:0001501 "skeletal system development"
evidence=IEA] [GO:0001701 "in utero embryonic development"
evidence=IEA] [GO:0003007 "heart morphogenesis" evidence=IEA]
[GO:0007417 "central nervous system development" evidence=IEA]
[GO:0007512 "adult heart development" evidence=IEA] [GO:0007605
"sensory perception of sound" evidence=IEA] [GO:0007628 "adult
walking behavior" evidence=IEA] InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271 Pfam:PF07533
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
SMART:SM00592 SMART:SM00717 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0040018 GO:GO:0003682
GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780 IPI:IPI00590082
OMA:TFGVIFD GO:GO:0060123 GeneTree:ENSGT00560000077077
EMBL:AADN02022009 EMBL:AADN02022010 Ensembl:ENSGALT00000024950
ArrayExpress:F1NSG3 Uniprot:F1NSG3
Length = 2248
Score = 477 (173.0 bits), Expect = 2.1e-70, Sum P(4) = 2.1e-70
Identities = 117/305 (38%), Positives = 167/305 (54%)
Query: 455 LREYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTIAMLAHLACEKGIWGPHLIVVPTS 514
LREYQ G++WL+ + N ILADEMGLGKTI +I L + KGI GP L++ P S
Sbjct: 206 LREYQLEGVNWLLFNWYNTRNCILADEMGLGKTIQSITFLYEIYL-KGIHGPFLVIAPLS 264
Query: 515 VMLNWETEFLKWCPAFKILTYFGSAKERK--------FKR-QGWLKPNS--FHVCITTYR 563
+ NWE EF W ++ Y GS R+ FK QG + S FH ITT+
Sbjct: 265 TIPNWEREFRTWTE-LNVVVYHGSQASRRTIQLYEMYFKDPQGRVIKGSYKFHAIITTFE 323
Query: 564 LIIQDSKVFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPLQNDLMELW 623
+I+ D + W+ +++DEAH +KN + + L + + ++LLTGTPLQN + EL+
Sbjct: 324 MILTDCPELRNIPWRCVVIDEAHRLKNRNCKLLEGLKMMDLEHKVLLTGTPLQNTVEELF 383
Query: 624 SLMHFLMPHIFQSHQEFKDWFCNPISGMVEGQEKVNKEVVDRLHNVLRPFILRRLKRDVE 683
SL+HFL P F S F F G ++ +E+V K L +L+P +LRRLK DVE
Sbjct: 384 SLLHFLEPGRFPSETTFMQEF-----GDLKTEEQVQK-----LQAILKPMMLRRLKEDVE 433
Query: 684 KQLPMKQEHVIYCRLSKRQRNLYEDFIASSETQATLAS--ANFFGMISVIMQLRKVCNHP 741
K L K+E +I L+ Q+ Y + + + AN +++ +M+LRK CNHP
Sbjct: 434 KNLAPKEETIIEVELTNIQKKYYRAILEKNFAFLSKGGGQANVPNLLNTMMELRKCCNHP 493
Query: 742 DLFEG 746
L G
Sbjct: 494 YLING 498
Score = 377 (137.8 bits), Expect = 2.1e-70, Sum P(4) = 2.1e-70
Identities = 80/163 (49%), Positives = 107/163 (65%)
Query: 985 FPDRRLIQFDCGKLQELAILLRKLKSDGHRALIFTQMTKMLDILEEFISLYGYTYMRLDG 1044
F + +IQ GKL + LL KLK+ GHR LIF+QM + LDILE+++ Y Y R+DG
Sbjct: 518 FQLQAMIQA-AGKLVLIDKLLPKLKAGGHRVLIFSQMVRCLDILEDYLIQRRYPYERIDG 576
Query: 1045 STQPEERQTLMQRFNT-NPKIFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQD 1103
+ RQ + RF+ + F+F+L TR+GG+GINL ADT I +DSDWNP D QAQ
Sbjct: 577 RVRGNLRQAAIDRFSRPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQA 636
Query: 1104 RCHRIGQTREVHIYRLISESTIEENILKKANQKRALDDLVIQS 1146
RCHRIGQ++ V IYRLI+ ++ E + KA+ K LD V+QS
Sbjct: 637 RCHRIGQSKSVKIYRLITRNSYEREMFDKASLKLGLDKAVLQS 679
Score = 40 (19.1 bits), Expect = 3.0e-69, Sum P(5) = 3.0e-69
Identities = 9/32 (28%), Positives = 17/32 (53%)
Query: 1466 EDATFSDAMSPPSTSQKKRKKAELALYDDEER 1497
+D S + P S S+K ++ E DD+++
Sbjct: 1458 KDIEMSTDVDPKSISEKGSEEDEEEKLDDDDK 1489
Score = 39 (18.8 bits), Expect = 2.1e-70, Sum P(4) = 2.1e-70
Identities = 13/47 (27%), Positives = 22/47 (46%)
Query: 1180 INNGNEVSLSNADVEAALKCVEDEADYMALKRAE-QEEAVDNQEFTE 1225
+NN + NA + ED A K+ E +EE D+++ T+
Sbjct: 2055 LNNPITATTGNATTASGQGETEDGASKAEEKKNENEEENKDSEKSTD 2101
Score = 39 (18.8 bits), Expect = 1.4e-36, Sum P(3) = 1.4e-36
Identities = 15/51 (29%), Positives = 22/51 (43%)
Query: 1580 NVWSRD-CVPSPDVWLPQEDAILCAVVHEYGPNWSLVSDILYGMTASGYYR 1629
N+ + D C+ W PQ D A H G + S+ I +T + Y R
Sbjct: 612 NLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKSV--KIYRLITRNSYER 660
Score = 38 (18.4 bits), Expect = 2.1e-70, Sum P(4) = 2.1e-70
Identities = 8/26 (30%), Positives = 13/26 (50%)
Query: 193 DKVGRESSAEMGEDEAEPTVVEEGHV 218
D GR+S + + E + + EG V
Sbjct: 14 DAAGRDSPSNTSQSEQQESADAEGPV 39
Score = 38 (18.4 bits), Expect = 3.0e-69, Sum P(5) = 3.0e-69
Identities = 13/61 (21%), Positives = 25/61 (40%)
Query: 1229 GRPEDDELVIEDTVRTDEPTDQGGCMTANNDNGMMLTGNDPKEERALTFAAKEDDVDMLA 1288
G + +V V+ ++ T+Q ++N +D KEE + + D D A
Sbjct: 1389 GCSQTPPIVPSTPVQEEKTTEQTESKVEGSENPAAKEKSDIKEETDIADKDTKQDCDAEA 1448
Query: 1289 D 1289
+
Sbjct: 1449 E 1449
>UNIPROTKB|Q03468 [details] [associations]
symbol:ERCC6 "DNA excision repair protein ERCC-6"
species:9606 "Homo sapiens" [GO:0000303 "response to superoxide"
evidence=IEA] [GO:0006290 "pyrimidine dimer repair" evidence=IEA]
[GO:0007256 "activation of JNKK activity" evidence=IEA] [GO:0007257
"activation of JUN kinase activity" evidence=IEA] [GO:0008630
"intrinsic apoptotic signaling pathway in response to DNA damage"
evidence=IEA] [GO:0009636 "response to toxic substance"
evidence=IEA] [GO:0010165 "response to X-ray" evidence=IEA]
[GO:0010224 "response to UV-B" evidence=IEA] [GO:0010332 "response
to gamma radiation" evidence=IEA] [GO:0045494 "photoreceptor cell
maintenance" evidence=IEA] [GO:0006366 "transcription from RNA
polymerase II promoter" evidence=NAS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0003677 "DNA binding" evidence=IDA] [GO:0003678
"DNA helicase activity" evidence=IDA] [GO:0008094 "DNA-dependent
ATPase activity" evidence=IDA] [GO:0047485 "protein N-terminus
binding" evidence=IPI] [GO:0008022 "protein C-terminus binding"
evidence=IPI] [GO:0032784 "regulation of DNA-dependent
transcription, elongation" evidence=IDA] [GO:0008023 "transcription
elongation factor complex" evidence=IDA] [GO:0032786 "positive
regulation of DNA-dependent transcription, elongation"
evidence=IDA] [GO:0006283 "transcription-coupled
nucleotide-excision repair" evidence=IMP;TAS] [GO:0032403 "protein
complex binding" evidence=IDA] [GO:0009411 "response to UV"
evidence=IDA] [GO:0005524 "ATP binding" evidence=IDA] [GO:0005654
"nucleoplasm" evidence=IDA;TAS] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0006979
"response to oxidative stress" evidence=IDA] [GO:0006284
"base-excision repair" evidence=IMP] [GO:0003682 "chromatin
binding" evidence=IDA] [GO:0006281 "DNA repair" evidence=TAS]
[GO:0006289 "nucleotide-excision repair" evidence=TAS]
Reactome:REACT_216 InterPro:IPR000330 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0009411 GO:GO:0008630 GO:GO:0006979
GO:GO:0005730 GO:GO:0032403 GO:GO:0006284 GO:GO:0003677
GO:GO:0009636 GO:GO:0003682 Orphanet:279 GO:GO:0045494
GO:GO:0010332 GO:GO:0006366 GO:GO:0004386 GO:GO:0010165
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0010224 GO:GO:0007257 GO:GO:0006283 GO:GO:0008094
GO:GO:0008023 EMBL:CH471187 GO:GO:0032786 GO:GO:0006290
GO:GO:0007256 Orphanet:1466 EMBL:L04791 EMBL:AY204752 EMBL:AL138760
IPI:IPI00414779 PIR:A44224 RefSeq:NP_000115.1 UniGene:Hs.654449
ProteinModelPortal:Q03468 SMR:Q03468 DIP:DIP-193N IntAct:Q03468
MINT:MINT-1193928 STRING:Q03468 PhosphoSite:Q03468 DMDM:416959
PaxDb:Q03468 PRIDE:Q03468 Ensembl:ENST00000355832 GeneID:2074
KEGG:hsa:2074 UCSC:uc001jhr.4 CTD:2074 GeneCards:GC10M050663
HGNC:HGNC:3438 MIM:133540 MIM:214150 MIM:278800 MIM:600630
MIM:609413 MIM:613761 neXtProt:NX_Q03468 Orphanet:90321
Orphanet:90322 Orphanet:90324 Orphanet:1569 Orphanet:178338
PharmGKB:PA27852 HOGENOM:HOG000170952 HOVERGEN:HBG051502
InParanoid:Q03468 KO:K10841 OMA:NGEMQIF OrthoDB:EOG476JZF
PhylomeDB:Q03468 ChiTaRS:ERCC6 GenomeRNAi:2074 NextBio:8437
ArrayExpress:Q03468 Bgee:Q03468 CleanEx:HS_ERCC6
Genevestigator:Q03468 GermOnline:ENSG00000032514 GO:GO:0000303
Uniprot:Q03468
Length = 1493
Score = 460 (167.0 bits), Expect = 2.2e-70, Sum P(4) = 2.2e-70
Identities = 125/326 (38%), Positives = 172/326 (52%)
Query: 446 KFP-FLLKFPLREYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTIAMLAHLACEK--- 501
K P FL K L +YQ G+ WL ++ ++ GIL DEMGLGKTI IA LA L+ K
Sbjct: 498 KVPGFLFK-KLFKYQQTGVRWLWELHCQQAGGILGDEMGLGKTIQIIAFLAGLSYSKIRT 556
Query: 502 --------GIWGPHLIVVPTSVMLNWETEFLKWCPAFK--ILTYFGSAKERKFKRQGWLK 551
G+ GP +IV PT+VM W EF W P F+ IL GS +K K +
Sbjct: 557 RGSNYRFEGL-GPTVIVCPTTVMHQWVKEFHTWWPPFRVAILHETGSYTHKKEKLIRDVA 615
Query: 552 PNSFHVCITTYRLI--IQDSKVFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRIL 609
+ + IT+Y I +QD R W Y+ILDE H I+N + F + RI+
Sbjct: 616 -HCHGILITSYSYIRLMQDD--ISRYDWHYVILDEGHKIRNPNAAVTLACKQFRTPHRII 672
Query: 610 LTGTPLQNDLMELWSLMHFLMPHIFQSHQEFKDWFCNPIS-GMVEGQEKVNKEVVDRLHN 668
L+G+P+QN+L ELWSL F+ P + F + F PI+ G V + +
Sbjct: 673 LSGSPMQNNLRELWSLFDFIFPGKLGTLPVFMEQFSVPITMGGYSNASPVQVKTAYKCAC 732
Query: 669 VLR----PFILRRLKRDVEKQL--PMKQEHVIYCRLSKRQRNLYEDFIASSETQATLASA 722
VLR P++LRR+K DV+ L P K E V++CRL+ Q +Y++F+ S E L
Sbjct: 733 VLRDTINPYLLRRMKSDVKMSLSLPDKNEQVLFCRLTDEQHKVYQNFVDSKEVYRILNGE 792
Query: 723 NFFGMISVIMQLRKVCNHPDLFEGRP 748
+ S ++ LRK+CNHPDLF G P
Sbjct: 793 --MQIFSGLIALRKICNHPDLFSGGP 816
Score = 367 (134.2 bits), Expect = 2.2e-70, Sum P(4) = 2.2e-70
Identities = 74/169 (43%), Positives = 109/169 (64%)
Query: 996 GKLQELAILLRKLKSDGHRALIFTQMTKMLDILEEFISLYGYTYMRLDGSTQPEERQTLM 1055
GK+ + LL+ G R L+F+Q +MLDILE F+ YTY+++DG+T RQ L+
Sbjct: 839 GKMIVVESLLKIWHKQGQRVLLFSQSRQMLDILEVFLRAQKYTYLKMDGTTTIASRQPLI 898
Query: 1056 QRFNTNPKIFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQDRCHRIGQTREVH 1115
R+N + IF+F+L+TR GG+G+NL GA+ V+ YD DWNP+ D QA++R RIGQ ++V
Sbjct: 899 TRYNEDTSIFVFLLTTRVGGLGVNLTGANRVVIYDPDWNPSTDTQARERAWRIGQKKQVT 958
Query: 1116 IYRLISESTIEENILKKANQKRALDDLVIQSGGYNTEFFKKLDPMELFS 1164
+YRL++ TIEE I + K+ L + V++ FFK D ELF+
Sbjct: 959 VYRLLTAGTIEEKIYHRQIFKQFLTNRVLKDPKQR-RFFKSNDLYELFT 1006
Score = 57 (25.1 bits), Expect = 2.2e-70, Sum P(4) = 2.2e-70
Identities = 29/121 (23%), Positives = 54/121 (44%)
Query: 27 SKDVKKFWMKIEKLVLYKHQMEVDVRKKKALDKQLEFLLGQTERYSSMLAENLVDSHKPV 86
S+D+ + K++ + K+ E ++K A K L+ +LG E + +L + +P
Sbjct: 164 SRDINR---KLDSVKRQKYNKEQQLKKITAKQKHLQAILGGAEVKIELDHASLEEDAEPG 220
Query: 87 QQS------PMRE---QPGIQYKEADENGAEEPGVQSKEADEDDAEQHSGFEPQL-DAAD 136
S P++E + I+ + G + P Q K+ + + SGFE L D A
Sbjct: 221 PSSLGSMLMPVQETAWEELIRTGQMTPFGTQIPQKQEKKPRKIMLNEASGFEKYLADQAK 280
Query: 137 I 137
+
Sbjct: 281 L 281
Score = 49 (22.3 bits), Expect = 1.5e-69, Sum P(4) = 1.5e-69
Identities = 20/87 (22%), Positives = 40/87 (45%)
Query: 52 RKKKALDKQLEFLLGQTERYSSMLAENLVDSHKPVQQSPMREQPGIQYKEADENGAEEPG 111
+K++ L K ++ L + ++ + L + +P +S MR + E D G E
Sbjct: 323 KKEERLKKHIKKLQKRALQFQGKVG--LPKARRP-WESDMRPEA-----EGDSEGEESEY 374
Query: 112 VQSKEADEDDAEQHSGFEPQL--DAAD 136
++E +E++ ++ G E L D D
Sbjct: 375 FPTEEEEEEEDDEVEGAEADLSGDGTD 401
Score = 39 (18.8 bits), Expect = 1.6e-25, Sum P(3) = 1.6e-25
Identities = 13/53 (24%), Positives = 23/53 (43%)
Query: 652 VEGQEKVNKEVVDRLHNVLRPFILRRLKRDVEKQLPMKQEHVIYCRLSKRQRN 704
V Q+ + + V+ ++ N + DVEK+ + + C S RQ N
Sbjct: 99 VYDQDVLEQGVLQQVDNAIHEASRASQLVDVEKEYRSVLDDLTSCTTSLRQIN 151
Score = 37 (18.1 bits), Expect = 2.2e-70, Sum P(4) = 2.2e-70
Identities = 8/25 (32%), Positives = 16/25 (64%)
Query: 1644 ELIQRYILSVPDNSINEKTSNVGSG 1668
+L + + L+ PD S + +TS + +G
Sbjct: 1000 DLYELFTLTSPDASQSTETSAIFAG 1024
>RGD|1309820 [details] [associations]
symbol:Hells "helicase, lymphoid specific" species:10116 "Rattus
norvegicus" [GO:0000775 "chromosome, centromeric region"
evidence=ISO] [GO:0001655 "urogenital system development"
evidence=ISO] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003682
"chromatin binding" evidence=ISO] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO] [GO:0005721 "centromeric heterochromatin"
evidence=ISO] [GO:0006306 "DNA methylation" evidence=ISO]
[GO:0006342 "chromatin silencing" evidence=ISO] [GO:0006346
"methylation-dependent chromatin silencing" evidence=ISO]
[GO:0007275 "multicellular organismal development" evidence=ISO]
[GO:0010216 "maintenance of DNA methylation" evidence=ISO]
[GO:0031508 "centromeric heterochromatin assembly" evidence=ISO]
[GO:0043066 "negative regulation of apoptotic process"
evidence=ISO] InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 RGD:1309820
GO:GO:0005524 GO:GO:0005634 GO:GO:0003677 GO:GO:0003682
GO:GO:0001655 GO:GO:0004386 GO:GO:0005721 InterPro:IPR014001
PROSITE:PS51192 GO:GO:0031508 GO:GO:0010216 GO:GO:0006346
GO:GO:0046651 IPI:IPI00768565 PRIDE:F1M8B3
Ensembl:ENSRNOT00000017812 OMA:XVERVEL Uniprot:F1M8B3
Length = 494
Score = 452 (164.2 bits), Expect = 6.1e-70, Sum P(2) = 6.1e-70
Identities = 107/261 (40%), Positives = 152/261 (58%)
Query: 962 KCSEVLSPLLFPIRPAIVRRQVYFPDRRLIQFDCGKLQELAILLRKLKSDGHRALIFTQM 1021
KC + +PI P Q + D L+ + GK L +L +LK H+ L+F+QM
Sbjct: 225 KCCNHPYMIEYPIDPVT---QEFKIDEELVT-NSGKFLILDRMLPELKKRCHKVLVFSQM 280
Query: 1022 TKMLDILEEFISLYGYTYMRLDGSTQPEERQTLMQRFNTNPKIFLFILSTRSGGVGINLV 1081
T MLDIL ++ L +T+ RLDGS ER+ + FNT+P++FLF++STR+GG+GINL
Sbjct: 281 TSMLDILMDYCHLRNFTFSRLDGSMSYSEREKNIYSFNTDPEVFLFLVSTRAGGLGINLT 340
Query: 1082 GADTVIFYDSDWNPAMDQQAQDRCHRIGQTREVHIYRLISESTIEENILKKANQKRALDD 1141
ADTVI YDSDWNP D QAQDRCHRIGQT+ V +YRL++ +TI++ I+++A KR L+
Sbjct: 341 AADTVIIYDSDWNPQSDLQAQDRCHRIGQTKPVVVYRLVTANTIDQKIVERAAAKRKLEK 400
Query: 1142 LVIQS----GGYNTEFFKK--LDPMELFSGHRTLPMKTMQKEKAINNGNEVSLSNADVEA 1195
L+I GG + K LD EL +K+ E+ + E +S+ D+E
Sbjct: 401 LIIHKNHFKGGQSGLSQSKNFLDAKELME-----LLKSRDYEREVKGSREKVISDEDLEL 455
Query: 1196 ALKCVEDEADYMALKRAEQEE 1216
L D D M R +E+
Sbjct: 456 LLDR-SDLIDQMKASRPIKEK 475
Score = 304 (112.1 bits), Expect = 6.1e-70, Sum P(2) = 6.1e-70
Identities = 63/135 (46%), Positives = 87/135 (64%)
Query: 577 WKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPLQNDLMELWSLMHFLMPHIFQS 636
WKYLI+DE H IKN K + + L FN+ ++LLTGTPLQN+L ELWSL++FL+P +F
Sbjct: 4 WKYLIVDEGHRIKNMKCRLIRELKRFNADNKLLLTGTPLQNNLSELWSLLNFLLPDVFDD 63
Query: 637 HQEFKDWFCNPISGMVEGQEKV-NKE----VVDRLHNVLRPFILRRLKRDVEKQLPMKQE 691
+ F+ WF I+ + E E + KE V+ LH +L PF+LRRLK DV ++P K+E
Sbjct: 64 LKSFESWF--DITSLSETAEDIIAKEREQNVLHMLHQILTPFLLRRLKSDVALEVPPKRE 121
Query: 692 HVIYCRLSKRQRNLY 706
V+Y L +Q Y
Sbjct: 122 VVVYAPLCNKQEIFY 136
Score = 60 (26.2 bits), Expect = 2.9e-44, Sum P(2) = 2.9e-44
Identities = 29/93 (31%), Positives = 44/93 (47%)
Query: 660 KEVVDRLHNVLRPFILRRLKRDVE----KQLPMKQEHVIYCRLS---KRQRNLYEDFIAS 712
KE V+ L RP RR ++ + Q P + E +I ++ KR+R + E I
Sbjct: 153 KETVE-LSPTGRP--KRRSRKSINYSELDQFPSELEKLI-SQIQPEVKRERTVVEGNIPI 208
Query: 713 SETQATLASANFFGMISVIMQLRKVCNHPDLFE 745
E++ L N ++M LRK CNHP + E
Sbjct: 209 -ESEVNLKLQN------IMMLLRKCCNHPYMIE 234
Score = 46 (21.3 bits), Expect = 2.3e-23, Sum P(2) = 2.3e-23
Identities = 22/81 (27%), Positives = 38/81 (46%)
Query: 967 LSPLLFPIRPAIVRRQVYFPDRRLIQFDCG-KLQELAILLRKLKSDGHRALI---FTQMT 1022
L L+ I+P + R + I+ + KLQ + +LLRK + H +I +T
Sbjct: 184 LEKLISQIQPEVKRERTVVEGNIPIESEVNLKLQNIMMLLRKCCN--HPYMIEYPIDPVT 241
Query: 1023 KMLDILEEFISLYGYTYMRLD 1043
+ I EE ++ G ++ LD
Sbjct: 242 QEFKIDEELVTNSG-KFLILD 261
>UNIPROTKB|F1RT88 [details] [associations]
symbol:CHD7 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0060324 "face development" evidence=IEA] [GO:0060123
"regulation of growth hormone secretion" evidence=IEA] [GO:0060041
"retina development in camera-type eye" evidence=IEA] [GO:0060021
"palate development" evidence=IEA] [GO:0050890 "cognition"
evidence=IEA] [GO:0048844 "artery morphogenesis" evidence=IEA]
[GO:0048752 "semicircular canal morphogenesis" evidence=IEA]
[GO:0043584 "nose development" evidence=IEA] [GO:0040018 "positive
regulation of multicellular organism growth" evidence=IEA]
[GO:0035116 "embryonic hindlimb morphogenesis" evidence=IEA]
[GO:0030540 "female genitalia development" evidence=IEA]
[GO:0030217 "T cell differentiation" evidence=IEA] [GO:0021545
"cranial nerve development" evidence=IEA] [GO:0008015 "blood
circulation" evidence=IEA] [GO:0007628 "adult walking behavior"
evidence=IEA] [GO:0007605 "sensory perception of sound"
evidence=IEA] [GO:0007512 "adult heart development" evidence=IEA]
[GO:0007417 "central nervous system development" evidence=IEA]
[GO:0003007 "heart morphogenesis" evidence=IEA] [GO:0001701 "in
utero embryonic development" evidence=IEA] [GO:0001501 "skeletal
system development" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001005
InterPro:IPR001650 InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271
Pfam:PF07533 PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298
SMART:SM00490 SMART:SM00592 SMART:SM00717 Pfam:PF00385
GO:GO:0005524 GO:GO:0005634 GO:GO:0003677 GO:GO:0008015
GO:GO:0003007 GO:GO:0050890 GO:GO:0001701 GO:GO:0040018
GO:GO:0007417 GO:GO:0003682 GO:GO:0001501 GO:GO:0060041
GO:GO:0007605 GO:GO:0007512 GO:GO:0004386 GO:GO:0035116
GO:GO:0060324 GO:GO:0060021 GO:GO:0048844 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0030540 GO:GO:0007628 GO:GO:0030217 GO:GO:0048752
InterPro:IPR023780 OMA:TFGVIFD GO:GO:0021545 GO:GO:0043584
GO:GO:0060123 GeneTree:ENSGT00560000077077 EMBL:CU179734
Ensembl:ENSSSCT00000006828 Uniprot:F1RT88
Length = 2991
Score = 483 (175.1 bits), Expect = 7.9e-70, Sum P(5) = 7.9e-70
Identities = 118/305 (38%), Positives = 168/305 (55%)
Query: 455 LREYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTIAMLAHLACEKGIWGPHLIVVPTS 514
LREYQ G++WL+ + N ILADEMGLGKTI +I L + KGI GP L++ P S
Sbjct: 961 LREYQLEGVNWLLFNWYNMRNCILADEMGLGKTIQSITFLYEIYL-KGIHGPFLVIAPLS 1019
Query: 515 VMLNWETEFLKWCPAFKILTYFGSAKERK--------FKR-QGWLKPNS--FHVCITTYR 563
+ NWE EF W ++ Y GS R+ FK QG + S FH ITT+
Sbjct: 1020 TIPNWEREFRTWTE-LNVVVYHGSQASRRTIQLYEMYFKDPQGRVIKGSYKFHAIITTFE 1078
Query: 564 LIIQDSKVFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPLQNDLMELW 623
+I+ D + W+ +++DEAH +KN + + L + + ++LLTGTPLQN + EL+
Sbjct: 1079 MILTDCPELRNIPWRCVVIDEAHRLKNRNCKLLEGLKMMDLEHKVLLTGTPLQNTVEELF 1138
Query: 624 SLMHFLMPHIFQSHQEFKDWFCNPISGMVEGQEKVNKEVVDRLHNVLRPFILRRLKRDVE 683
SL+HFL P F S F F G ++ +E+V K L +L+P +LRRLK DVE
Sbjct: 1139 SLLHFLEPSRFPSETTFMQEF-----GDLKTEEQVQK-----LQAILKPMMLRRLKEDVE 1188
Query: 684 KQLPMKQEHVIYCRLSKRQRNLYEDFIASSETQATLAS--ANFFGMISVIMQLRKVCNHP 741
K L K+E +I L+ Q+ Y + + T + AN +++ +M+LRK CNHP
Sbjct: 1189 KNLAPKEETIIEVELTNIQKKYYRAILEKNFTFLSKGGGQANVPNLLNTMMELRKCCNHP 1248
Query: 742 DLFEG 746
L G
Sbjct: 1249 YLING 1253
Score = 366 (133.9 bits), Expect = 7.9e-70, Sum P(5) = 7.9e-70
Identities = 80/165 (48%), Positives = 107/165 (64%)
Query: 985 FPDRRLIQFDCGKLQELAILLRKLKSDGHRALIFTQMTKMLDILEEFISLYGYTYMRLDG 1044
F + +IQ GKL + LL KLK+ GHR LIF+QM + LDILE+++ Y Y R+DG
Sbjct: 1273 FQLQAMIQA-AGKLVLIDKLLPKLKAGGHRVLIFSQMVRCLDILEDYLIQRRYPYERIDG 1331
Query: 1045 STQPEERQTLMQRFNT-NPKIFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQ--QA 1101
+ RQ + RF+ + F+F+L TR+GG+GINL ADT I +DSDWNP M QA
Sbjct: 1332 RVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPKMISSFQA 1391
Query: 1102 QDRCHRIGQTREVHIYRLISESTIEENILKKANQKRALDDLVIQS 1146
Q RCHRIGQ++ V IYRLI+ ++ E + KA+ K LD V+QS
Sbjct: 1392 QARCHRIGQSKSVKIYRLITRNSYEREMFDKASLKLGLDKAVLQS 1436
Score = 48 (22.0 bits), Expect = 7.9e-70, Sum P(5) = 7.9e-70
Identities = 47/220 (21%), Positives = 76/220 (34%)
Query: 1141 DLVI---QSGGYNTEFFKKLDP-MELFSGHRTLPMKTMQKEKAINNGNEVSLSNADVEAA 1196
DL++ + G T++ DP + H+T + N V V
Sbjct: 2101 DLLVGAAKHGVSRTDYHILNDPELSFLDAHKTFAQNRGAGSTSALNPLAVGFGQTPVATP 2160
Query: 1197 LKCVEDEADYMALKRAEQEEAVDNQEFTEEAVGRPEDD--ELVIEDTVRTDEPTD-QGGC 1253
++E A +AE+ E + ++ EEA G +D + E +EP + G
Sbjct: 2161 AAPGQEEKT-AAEGKAEEAERPEVKDEEEEAEGSGKDKKRDREAEAGAARNEPKGVEVGA 2219
Query: 1254 MTANNDNGMMLTGNDPKEERALTFAAKEDDVDMLADVKQMXXXXXXXGEAISSFENQLRP 1313
T + G++ EE L EDD D + Q G+ N
Sbjct: 2220 DTG--PKSISEKGSEEDEEEKL-----EDD-DKSEESSQPEAGAVSRGKNFDEESNASMS 2271
Query: 1314 IDRYAIR---FLELWDPIIDKTAVESEVKFEEREWELDRI 1350
R R ++E DP + + E F W DR+
Sbjct: 2272 TARDETRDGFYMEDGDPAVAQLLHERTFAFSF--WPKDRV 2309
Score = 44 (20.5 bits), Expect = 7.9e-70, Sum P(5) = 7.9e-70
Identities = 11/49 (22%), Positives = 24/49 (48%)
Query: 90 PMREQPGIQYKEADENGAEEPGVQSKEADEDDAE-----QHSGFEPQLD 133
P++ PG+ ++ + + +P Q + ++ + QHS EP L+
Sbjct: 509 PLQPHPGLHHQPSPPHPHHQPWAQLHPSPQNTPQKVPVPQHSPSEPFLE 557
Score = 42 (19.8 bits), Expect = 7.9e-70, Sum P(5) = 7.9e-70
Identities = 9/26 (34%), Positives = 14/26 (53%)
Query: 193 DKVGRESSAEMGEDEAEPTVVEEGHV 218
D GR+S + + E + +V EG V
Sbjct: 769 DAAGRDSPSNTSQSEQQESVDAEGPV 794
Score = 39 (18.8 bits), Expect = 2.1e-25, Sum P(3) = 2.1e-25
Identities = 5/13 (38%), Positives = 8/13 (61%)
Query: 503 IWGPHLIVVPTSV 515
+WGP + VP +
Sbjct: 144 LWGPRAVPVPDQI 156
>UNIPROTKB|F1SDX0 [details] [associations]
symbol:ERCC6 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0047485 "protein N-terminus binding" evidence=IEA]
[GO:0045494 "photoreceptor cell maintenance" evidence=IEA]
[GO:0032786 "positive regulation of DNA-dependent transcription,
elongation" evidence=IEA] [GO:0032403 "protein complex binding"
evidence=IEA] [GO:0010332 "response to gamma radiation"
evidence=IEA] [GO:0010224 "response to UV-B" evidence=IEA]
[GO:0010165 "response to X-ray" evidence=IEA] [GO:0009636 "response
to toxic substance" evidence=IEA] [GO:0008630 "intrinsic apoptotic
signaling pathway in response to DNA damage" evidence=IEA]
[GO:0008094 "DNA-dependent ATPase activity" evidence=IEA]
[GO:0008023 "transcription elongation factor complex" evidence=IEA]
[GO:0008022 "protein C-terminus binding" evidence=IEA] [GO:0007257
"activation of JUN kinase activity" evidence=IEA] [GO:0007256
"activation of JNKK activity" evidence=IEA] [GO:0006290 "pyrimidine
dimer repair" evidence=IEA] [GO:0006284 "base-excision repair"
evidence=IEA] [GO:0006283 "transcription-coupled
nucleotide-excision repair" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0000303 "response to superoxide" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0008630
GO:GO:0005730 GO:GO:0006284 GO:GO:0003677 GO:GO:0009636
GO:GO:0003682 GO:GO:0045494 GO:GO:0010332 GO:GO:0004386
GO:GO:0010165 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0010224 GO:GO:0007257 GO:GO:0006283 GO:GO:0008094
GO:GO:0008023 GO:GO:0032786 GO:GO:0006290 GO:GO:0007256
GeneTree:ENSGT00590000083118 KO:K10841 OMA:NGEMQIF GO:GO:0000303
EMBL:CT990602 EMBL:CT990615 RefSeq:XP_003483566.1
Ensembl:ENSSSCT00000011375 GeneID:100738583 KEGG:ssc:100738583
Uniprot:F1SDX0
Length = 1481
Score = 466 (169.1 bits), Expect = 8.3e-70, Sum P(4) = 8.3e-70
Identities = 126/326 (38%), Positives = 172/326 (52%)
Query: 446 KFP-FLLKFPLREYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTIAMLAHLACEK--- 501
K P FL K L +YQ G+ WL ++ ++ GIL DEMGLGKTI IA LA L+ K
Sbjct: 487 KMPGFLFK-KLFKYQQTGVRWLWELHCQQAGGILGDEMGLGKTIQIIAFLAGLSYSKIRT 545
Query: 502 --------GIWGPHLIVVPTSVMLNWETEFLKWCPAFK--ILTYFGSAKERKFKRQGWLK 551
G+ GP +IV PT+VM W EF W P F+ IL GS +K K +
Sbjct: 546 RGSNYRFEGL-GPTIIVCPTTVMHQWVKEFHTWWPPFRVAILHETGSFTHKKEKLVRDIA 604
Query: 552 PNSFHVCITTYRLI--IQDSKVFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRIL 609
+ + IT+Y I +QD R W Y+ILDE H I+N + F + RI+
Sbjct: 605 -HCHGILITSYSYIRLMQDD--ISRHDWHYVILDEGHKIRNPNAAITLACKQFRTPHRII 661
Query: 610 LTGTPLQNDLMELWSLMHFLMPHIFQSHQEFKDWFCNPIS-GMVEGQEKVNKEVVDRLHN 668
L+G+P+QN+L ELWSL F+ P + F + F PI+ G V + +
Sbjct: 662 LSGSPMQNNLRELWSLFDFIFPGKLGTLPVFMEQFSVPITMGGYSNASPVQVKTAYKCAC 721
Query: 669 VLR----PFILRRLKRDVEKQL--PMKQEHVIYCRLSKRQRNLYEDFIASSETQATLASA 722
VLR P++LRR+K DV+ L P K E V++CRL+ Q +Y++FI S E L
Sbjct: 722 VLRDTINPYLLRRMKSDVKMSLSLPDKNEQVLFCRLTDEQHKVYQNFIDSKEVYRILNGE 781
Query: 723 NFFGMISVIMQLRKVCNHPDLFEGRP 748
+ S ++ LRK+CNHPDLF G P
Sbjct: 782 --MQIFSGLVALRKICNHPDLFSGGP 805
Score = 364 (133.2 bits), Expect = 8.3e-70, Sum P(4) = 8.3e-70
Identities = 74/169 (43%), Positives = 109/169 (64%)
Query: 996 GKLQELAILLRKLKSDGHRALIFTQMTKMLDILEEFISLYGYTYMRLDGSTQPEERQTLM 1055
GK+ + LL+ G R L+F+Q +MLDILE F+ Y+Y+++DG+T RQ L+
Sbjct: 828 GKMIVVESLLKIWHKQGQRVLLFSQSRQMLDILEVFLRAQKYSYLKMDGTTTIASRQPLI 887
Query: 1056 QRFNTNPKIFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQDRCHRIGQTREVH 1115
R+N + IF+F+L+TR GG+G+NL GA+ VI YD DWNP+ D QA++R RIGQ ++V
Sbjct: 888 TRYNEDASIFVFLLTTRVGGLGVNLTGANRVIIYDPDWNPSTDTQARERAWRIGQKKQVT 947
Query: 1116 IYRLISESTIEENILKKANQKRALDDLVIQSGGYNTEFFKKLDPMELFS 1164
+YRL++ TIEE I + K+ L + V++ FFK D ELF+
Sbjct: 948 VYRLLTAGTIEEKIYHRQIFKQFLTNRVLKDPKQR-RFFKSNDLYELFT 995
Score = 46 (21.3 bits), Expect = 8.3e-70, Sum P(4) = 8.3e-70
Identities = 28/125 (22%), Positives = 56/125 (44%)
Query: 27 SKDVKKFWMKIEKLVLYKHQMEVDVRKKKALDKQLEFLLGQTE-----RYSSMLAENLVD 81
++D+ + K++ + K+ E ++K A K+L+ +LG E ++S+ E +
Sbjct: 163 NRDINR---KLDSVKRQKYNKEQQLKKITAKRKRLQAILGGAEVQVEIDHASLEEEEDAE 219
Query: 82 SHK--------PVQQSPMREQPGIQYKEADENGAEEPGVQSKEADEDDAEQHSGFEPQL- 132
+ PVQ++ E ++ + G + P Q K+ + + SGFE L
Sbjct: 220 AGPSCLGSMLMPVQEAAWEEL--VRTGQMTPFGTQIPQKQEKKPRKLMLNEASGFEKYLA 277
Query: 133 DAADI 137
D A +
Sbjct: 278 DQAKL 282
Score = 39 (18.8 bits), Expect = 8.3e-70, Sum P(4) = 8.3e-70
Identities = 8/25 (32%), Positives = 16/25 (64%)
Query: 1644 ELIQRYILSVPDNSINEKTSNVGSG 1668
+L + + L+ PD S + +TS + +G
Sbjct: 989 DLYELFTLTSPDTSQSTETSAIFAG 1013
Score = 39 (18.8 bits), Expect = 8.3e-70, Sum P(4) = 8.3e-70
Identities = 9/26 (34%), Positives = 16/26 (61%)
Query: 1173 TMQKEKAINNGNEVSLSNADVEAALK 1198
T +EK+I G E++ + ++ E LK
Sbjct: 1056 TPSEEKSIAMGAEINAATSNQEDPLK 1081
Score = 39 (18.8 bits), Expect = 4.5e-69, Sum P(4) = 4.5e-69
Identities = 13/58 (22%), Positives = 24/58 (41%)
Query: 233 TSGSLVRRCDEINGGLSISENHLLDIETSQVRDTSKKSGASTQKQALYDFSDEQEDGD 290
T+ + R+ D + E L I + R + GA Q + + +E+ED +
Sbjct: 162 TNRDINRKLDSVKRQKYNKEQQLKKITAKRKRLQAILGGAEVQVEIDHASLEEEEDAE 219
>UNIPROTKB|F1N734 [details] [associations]
symbol:CHD6 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001005
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR006576
Pfam:PF00176 Pfam:PF00271 Pfam:PF07533 PROSITE:PS00690
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
SMART:SM00717 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
GO:GO:0003677 GO:GO:0003682 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR023780 OMA:CKWATME GeneTree:ENSGT00560000077077
EMBL:DAAA02036652 EMBL:DAAA02036653 EMBL:DAAA02036654
EMBL:DAAA02036655 IPI:IPI00924240 Ensembl:ENSBTAT00000061177
ArrayExpress:F1N734 Uniprot:F1N734
Length = 2720
Score = 480 (174.0 bits), Expect = 9.0e-70, Sum P(4) = 9.0e-70
Identities = 119/305 (39%), Positives = 170/305 (55%)
Query: 455 LREYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTIAMLAHLACEKGIWGPHLIVVPTS 514
LREYQ G++WL+ + R N ILADEMGLGKTI +I L+ + +GI GP LI+ P S
Sbjct: 460 LREYQLEGMNWLLFNWYNRKNCILADEMGLGKTIQSITFLSEIFL-RGIHGPFLIIAPLS 518
Query: 515 VMLNWETEFLKWCPAFKILTYFGSAKERKFKRQGWL-------KPNS----FHVCITTYR 563
+ NWE EF W + Y GS R+ +Q + P S FHV ITT+
Sbjct: 519 TITNWEREFRTWTE-MNAIVYHGSQISRQMIQQYEMVYRDAQGNPLSGVFKFHVVITTFE 577
Query: 564 LIIQDSKVFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPLQNDLMELW 623
+I+ D K+ W +I+DEAH +KN + + L + ++LLTGTPLQN + EL+
Sbjct: 578 MILADCPELKKIHWSCVIIDEAHRLKNRNCKLLEGLKLMALEHKVLLTGTPLQNSVEELF 637
Query: 624 SLMHFLMPHIFQSHQEFKDWFCNPISGMVEGQEKVNKEVVDRLHNVLRPFILRRLKRDVE 683
SL++FL P F S F + F G ++ +E+V K L ++L+P +LRRLK DVE
Sbjct: 638 SLLNFLEPSQFPSETAFLEEF-----GDLKTEEQVKK-----LQSILKPMMLRRLKDDVE 687
Query: 684 KQLPMKQEHVIYCRLSKRQRNLYEDFIASSETQATLASA--NFFGMISVIMQLRKVCNHP 741
K L KQE +I L+ Q+ Y + + + + + N +I+ +M+LRK CNHP
Sbjct: 688 KNLAPKQETIIEVELTNIQKKYYRAILEKNFSFLSKGANQHNMPNLINTMMELRKCCNHP 747
Query: 742 DLFEG 746
L G
Sbjct: 748 YLISG 752
Score = 366 (133.9 bits), Expect = 9.0e-70, Sum P(4) = 9.0e-70
Identities = 81/181 (44%), Positives = 113/181 (62%)
Query: 985 FPDRRLIQFDCGKLQELAILLRKLKSDGHRALIFTQMTKMLDILEEFISLYGYTYMRLDG 1044
F + +IQ GKL + LL KL + GH+ LIF+QM + LDILE+++ YTY R+DG
Sbjct: 772 FQLQAMIQA-AGKLVLIDKLLPKLIAGGHKVLIFSQMVRCLDILEDYLIQRRYTYERIDG 830
Query: 1045 STQPEERQTLMQRF-NTNPKIFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQD 1103
+ RQ + RF + F+F+L TR+GG+GINL ADT I +DSDWNP D QAQ
Sbjct: 831 RVRGNLRQAAIDRFCKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQA 890
Query: 1104 RCHRIGQTREVHIYRLISESTIEENILKKANQKRALDDLVIQSGGY--NTEFFKKLDPME 1161
RCHRIGQ++ V +YRLI+ ++ E + KA+ K LD V+Q +T ++L ME
Sbjct: 891 RCHRIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQDINRKGSTNGVQQLSKME 950
Query: 1162 L 1162
+
Sbjct: 951 V 951
Score = 44 (20.5 bits), Expect = 9.0e-70, Sum P(4) = 9.0e-70
Identities = 18/57 (31%), Positives = 25/57 (43%)
Query: 80 VDSHKPVQQS--PMREQPGIQY--KEADENGAEEPG-----VQSKEADEDDAEQHSG 127
V SH P + + E+ G + K A NG E+ G V+ K +D E H G
Sbjct: 51 VASHCPAPKELYDVEEEAGPLFPRKTASHNGMEDSGGGGTGVKKKRKKKDPGE-HEG 106
Score = 41 (19.5 bits), Expect = 2.1e-37, Sum P(3) = 2.1e-37
Identities = 10/28 (35%), Positives = 15/28 (53%)
Query: 925 GLVESFMFAIPAARAPAPVCWCSKSGAS 952
GL+ + M A+ PAP+ +K G S
Sbjct: 2540 GLLNTPMATTCASAVPAPLSSTTKGGVS 2567
Score = 39 (18.8 bits), Expect = 9.0e-70, Sum P(4) = 9.0e-70
Identities = 10/40 (25%), Positives = 18/40 (45%)
Query: 1886 KHKLSLSDSVKCPKSKLRKTSMEHSEIQHSSPEPVSNQSV 1925
KH L+ +D +L + QH P+P + +S+
Sbjct: 1589 KHGLNRTDYYVMTDPQLSFLDAYRNYAQHKRPDPQAPESL 1628
Score = 38 (18.4 bits), Expect = 9.8e-24, Sum P(4) = 9.8e-24
Identities = 11/35 (31%), Positives = 17/35 (48%)
Query: 880 LRELLTVKHPVCDILQQKTVRRSYLYSSKLADIVL 914
L E+ V+ P D Q+ R Y S++L + L
Sbjct: 431 LPEIKHVERPASDSWQKLEKSREYKNSNQLREYQL 465
Score = 37 (18.1 bits), Expect = 4.8e-69, Sum P(4) = 4.8e-69
Identities = 11/55 (20%), Positives = 25/55 (45%)
Query: 25 NISKDVKKFWMKIEKLVLYKHQMEVDVRKKKALDKQLEFLLGQTERYSSMLAENL 79
++ + W K+EK YK+ ++ ++ L+ L R + +LA+ +
Sbjct: 436 HVERPASDSWQKLEKSREYKNSNQL---REYQLEGMNWLLFNWYNRKNCILADEM 487
>UNIPROTKB|Q06A37 [details] [associations]
symbol:CHD7 "Chromodomain-helicase-DNA-binding protein 7"
species:9031 "Gallus gallus" [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001005
InterPro:IPR001650 InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271
Pfam:PF07533 PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 SMART:SM00592 SMART:SM00717
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0003677 GO:GO:0006351 GO:GO:0003682 GO:GO:0016568
GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
PROSITE:PS00598 HOVERGEN:HBG081150 EMBL:DQ978381 IPI:IPI00590082
RefSeq:NP_001071054.1 UniGene:Gga.20865 ProteinModelPortal:Q06A37
SMR:Q06A37 GeneID:421140 KEGG:gga:421140 CTD:55636
HOGENOM:HOG000246942 InParanoid:Q06A37 KO:K14437 OrthoDB:EOG4MCWZD
NextBio:20823957 Uniprot:Q06A37
Length = 3011
Score = 477 (173.0 bits), Expect = 9.5e-70, Sum P(4) = 9.5e-70
Identities = 117/305 (38%), Positives = 167/305 (54%)
Query: 455 LREYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTIAMLAHLACEKGIWGPHLIVVPTS 514
LREYQ G++WL+ + N ILADEMGLGKTI +I L + KGI GP L++ P S
Sbjct: 969 LREYQLEGVNWLLFNWYNTRNCILADEMGLGKTIQSITFLYEIYL-KGIHGPFLVIAPLS 1027
Query: 515 VMLNWETEFLKWCPAFKILTYFGSAKERK--------FKR-QGWLKPNS--FHVCITTYR 563
+ NWE EF W ++ Y GS R+ FK QG + S FH ITT+
Sbjct: 1028 TIPNWEREFRTWTE-LNVVVYHGSQASRRTIQLYEMYFKDPQGRVIKGSYKFHAIITTFE 1086
Query: 564 LIIQDSKVFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPLQNDLMELW 623
+I+ D + W+ +++DEAH +KN + + L + + ++LLTGTPLQN + EL+
Sbjct: 1087 MILTDCPELRNIPWRCVVIDEAHRLKNRNCKLLEGLKMMDLEHKVLLTGTPLQNTVEELF 1146
Query: 624 SLMHFLMPHIFQSHQEFKDWFCNPISGMVEGQEKVNKEVVDRLHNVLRPFILRRLKRDVE 683
SL+HFL P F S F F G ++ +E+V K L +L+P +LRRLK DVE
Sbjct: 1147 SLLHFLEPGRFPSETTFMQEF-----GDLKTEEQVQK-----LQAILKPMMLRRLKEDVE 1196
Query: 684 KQLPMKQEHVIYCRLSKRQRNLYEDFIASSETQATLAS--ANFFGMISVIMQLRKVCNHP 741
K L K+E +I L+ Q+ Y + + + AN +++ +M+LRK CNHP
Sbjct: 1197 KNLAPKEETIIEVELTNIQKKYYRAILEKNFAFLSKGGGQANVPNLLNTMMELRKCCNHP 1256
Query: 742 DLFEG 746
L G
Sbjct: 1257 YLING 1261
Score = 377 (137.8 bits), Expect = 9.5e-70, Sum P(4) = 9.5e-70
Identities = 80/163 (49%), Positives = 107/163 (65%)
Query: 985 FPDRRLIQFDCGKLQELAILLRKLKSDGHRALIFTQMTKMLDILEEFISLYGYTYMRLDG 1044
F + +IQ GKL + LL KLK+ GHR LIF+QM + LDILE+++ Y Y R+DG
Sbjct: 1281 FQLQAMIQA-AGKLVLIDKLLPKLKAGGHRVLIFSQMVRCLDILEDYLIQRRYPYERIDG 1339
Query: 1045 STQPEERQTLMQRFNT-NPKIFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQD 1103
+ RQ + RF+ + F+F+L TR+GG+GINL ADT I +DSDWNP D QAQ
Sbjct: 1340 RVRGNLRQAAIDRFSRPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQA 1399
Query: 1104 RCHRIGQTREVHIYRLISESTIEENILKKANQKRALDDLVIQS 1146
RCHRIGQ++ V IYRLI+ ++ E + KA+ K LD V+QS
Sbjct: 1400 RCHRIGQSKSVKIYRLITRNSYEREMFDKASLKLGLDKAVLQS 1442
Score = 40 (19.1 bits), Expect = 2.2e-68, Sum P(5) = 2.2e-68
Identities = 9/32 (28%), Positives = 17/32 (53%)
Query: 1466 EDATFSDAMSPPSTSQKKRKKAELALYDDEER 1497
+D S + P S S+K ++ E DD+++
Sbjct: 2221 KDIEMSTDVDPKSISEKGSEEDEEEKLDDDDK 2252
Score = 39 (18.8 bits), Expect = 9.5e-70, Sum P(4) = 9.5e-70
Identities = 13/47 (27%), Positives = 22/47 (46%)
Query: 1180 INNGNEVSLSNADVEAALKCVEDEADYMALKRAE-QEEAVDNQEFTE 1225
+NN + NA + ED A K+ E +EE D+++ T+
Sbjct: 2818 LNNPITATTGNATTASGQGETEDGASKAEEKKNENEEENKDSEKSTD 2864
Score = 39 (18.8 bits), Expect = 4.3e-36, Sum P(3) = 4.3e-36
Identities = 15/51 (29%), Positives = 22/51 (43%)
Query: 1580 NVWSRD-CVPSPDVWLPQEDAILCAVVHEYGPNWSLVSDILYGMTASGYYR 1629
N+ + D C+ W PQ D A H G + S+ I +T + Y R
Sbjct: 1375 NLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKSV--KIYRLITRNSYER 1423
Score = 39 (18.8 bits), Expect = 2.8e-24, Sum P(4) = 2.8e-24
Identities = 5/20 (25%), Positives = 11/20 (55%)
Query: 503 IWGPHLIVVPTSVMLNWETE 522
+WGP + VP + ++ +
Sbjct: 144 MWGPRAVQVPDQIRAPYQQQ 163
Score = 38 (18.4 bits), Expect = 9.5e-70, Sum P(4) = 9.5e-70
Identities = 8/26 (30%), Positives = 13/26 (50%)
Query: 193 DKVGRESSAEMGEDEAEPTVVEEGHV 218
D GR+S + + E + + EG V
Sbjct: 777 DAAGRDSPSNTSQSEQQESADAEGPV 802
Score = 38 (18.4 bits), Expect = 2.2e-68, Sum P(5) = 2.2e-68
Identities = 13/61 (21%), Positives = 25/61 (40%)
Query: 1229 GRPEDDELVIEDTVRTDEPTDQGGCMTANNDNGMMLTGNDPKEERALTFAAKEDDVDMLA 1288
G + +V V+ ++ T+Q ++N +D KEE + + D D A
Sbjct: 2152 GCSQTPPIVPSTPVQEEKSTEQTESKVEGSENPAAKEKSDIKEETDIADKDTKQDCDAEA 2211
Query: 1289 D 1289
+
Sbjct: 2212 E 2212
Score = 37 (18.1 bits), Expect = 2.8e-68, Sum P(5) = 2.8e-68
Identities = 8/25 (32%), Positives = 14/25 (56%)
Query: 1327 PIIDKTAVESEVKFEEREWELDRIE 1351
PI+ T V+ E E+ E +++ E
Sbjct: 2158 PIVPSTPVQEEKSTEQTESKVEGSE 2182
>UNIPROTKB|Q8TD26 [details] [associations]
symbol:CHD6 "Chromodomain-helicase-DNA-binding protein 6"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=NAS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=NAS] [GO:0006338 "chromatin remodeling" evidence=NAS]
[GO:0007399 "nervous system development" evidence=NAS] [GO:0003682
"chromatin binding" evidence=NAS] InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271
Pfam:PF07533 PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 SMART:SM00717 Pfam:PF00385
GO:GO:0005524 GO:GO:0005634 GO:GO:0007399 GO:GO:0006355
GO:GO:0003677 GO:GO:0006351 GO:GO:0003682 GO:GO:0006338
InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR023780 PROSITE:PS00598 CleanEx:HS_CHD5 EMBL:AY034072
EMBL:AL121674 EMBL:AL031669 EMBL:AL031667 EMBL:BC021907
EMBL:BC039860 EMBL:BC040016 EMBL:AF525085 EMBL:AB037756
EMBL:AK026022 IPI:IPI00220289 IPI:IPI00395823 IPI:IPI00513717
RefSeq:NP_115597.3 UniGene:Hs.740645 UniGene:Hs.741381 PDB:2EPB
PDBsum:2EPB ProteinModelPortal:Q8TD26 SMR:Q8TD26 IntAct:Q8TD26
MINT:MINT-1197235 STRING:Q8TD26 PhosphoSite:Q8TD26 DMDM:296439466
PaxDb:Q8TD26 PRIDE:Q8TD26 Ensembl:ENST00000373222
Ensembl:ENST00000373233 Ensembl:ENST00000440647 GeneID:84181
KEGG:hsa:84181 UCSC:uc002xka.1 UCSC:uc002xkc.3 CTD:84181
GeneCards:GC20M040030 H-InvDB:HIX0015824 H-InvDB:HIX0027712
HGNC:HGNC:19057 neXtProt:NX_Q8TD26 PharmGKB:PA134974700
HOVERGEN:HBG081150 InParanoid:Q8TD26 KO:K14436 OMA:CKWATME
OrthoDB:EOG4NP72J PhylomeDB:Q8TD26 ChiTaRS:CHD6
EvolutionaryTrace:Q8TD26 GenomeRNAi:84181 NextBio:73559
ArrayExpress:Q8TD26 Bgee:Q8TD26 CleanEx:HS_CHD6
Genevestigator:Q8TD26 GermOnline:ENSG00000124177 Uniprot:Q8TD26
Length = 2715
Score = 484 (175.4 bits), Expect = 1.1e-69, Sum P(5) = 1.1e-69
Identities = 120/305 (39%), Positives = 170/305 (55%)
Query: 455 LREYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTIAMLAHLACEKGIWGPHLIVVPTS 514
LREYQ G++WL+ + R N ILADEMGLGKTI +I L+ + +GI GP LI+ P S
Sbjct: 461 LREYQLEGMNWLLFNWYNRKNCILADEMGLGKTIQSITFLSEIFL-RGIHGPFLIIAPLS 519
Query: 515 VMLNWETEFLKWCPAFKILTYFGSAKERKFKRQGWL-------KPNS----FHVCITTYR 563
+ NWE EF W + Y GS R+ +Q + P S FHV ITT+
Sbjct: 520 TITNWEREFRTWTE-MNAIVYHGSQISRQMIQQYEMVYRDAQGNPLSGVFKFHVVITTFE 578
Query: 564 LIIQDSKVFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPLQNDLMELW 623
+I+ D K+ W +I+DEAH +KN + + L + ++LLTGTPLQN + EL+
Sbjct: 579 MILADCPELKKIHWSCVIIDEAHRLKNRNCKLLEGLKLMALEHKVLLTGTPLQNSVEELF 638
Query: 624 SLMHFLMPHIFQSHQEFKDWFCNPISGMVEGQEKVNKEVVDRLHNVLRPFILRRLKRDVE 683
SL++FL P F S F + F G ++ +E+V K L ++L+P +LRRLK DVE
Sbjct: 639 SLLNFLEPSQFPSETAFLEEF-----GDLKTEEQVKK-----LQSILKPMMLRRLKDDVE 688
Query: 684 KQLPMKQEHVIYCRLSKRQRNLYEDFIASSETQATLASA--NFFGMISVIMQLRKVCNHP 741
K L KQE +I L+ Q+ Y + + + T + N +I+ +M+LRK CNHP
Sbjct: 689 KNLAPKQETIIEVELTNIQKKYYRAILEKNFSFLTKGANQHNMPNLINTMMELRKCCNHP 748
Query: 742 DLFEG 746
L G
Sbjct: 749 YLING 753
Score = 368 (134.6 bits), Expect = 1.1e-69, Sum P(5) = 1.1e-69
Identities = 83/183 (45%), Positives = 114/183 (62%)
Query: 985 FPDRRLIQFDCGKLQELAILLRKLKSDGHRALIFTQMTKMLDILEEFISLYGYTYMRLDG 1044
F + +IQ GKL + LL KL + GH+ LIF+QM + LDILE+++ YTY R+DG
Sbjct: 773 FQLQAMIQA-AGKLVLIDKLLPKLIAGGHKVLIFSQMVRCLDILEDYLIQRRYTYERIDG 831
Query: 1045 STQPEERQTLMQRF-NTNPKIFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQD 1103
+ RQ + RF + F+F+L TR+GG+GINL ADT I +DSDWNP D QAQ
Sbjct: 832 RVRGNLRQAAIDRFCKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQA 891
Query: 1104 RCHRIGQTREVHIYRLISESTIEENILKKANQKRALDDLVIQS----GGYNTEFFKKLDP 1159
RCHRIGQ++ V +YRLI+ ++ E + KA+ K LD V+Q GG N ++L
Sbjct: 892 RCHRIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQDINRKGGTNG--VQQLSK 949
Query: 1160 MEL 1162
ME+
Sbjct: 950 MEV 952
Score = 44 (20.5 bits), Expect = 1.1e-69, Sum P(5) = 1.1e-69
Identities = 18/66 (27%), Positives = 29/66 (43%)
Query: 1188 LSNADVEAALKCVEDEADYMALKRAEQEEAVDNQEFTEEAVGRPEDDELV--IEDTVRTD 1245
L N +E+ L ++ +D E+EE + +E AVG E E++ E T
Sbjct: 1848 LENKSLESKLILSQNHSD------EEEEEEENEEENLAMAVGMGERPEVLHLTEPTTNIS 1901
Query: 1246 EPTDQG 1251
+QG
Sbjct: 1902 REKNQG 1907
Score = 42 (19.8 bits), Expect = 1.1e-69, Sum P(5) = 1.1e-69
Identities = 11/46 (23%), Positives = 21/46 (45%)
Query: 86 VQQSPMREQPGIQYKEADENGAEEPGVQSKEADEDDAEQHSGFEPQ 131
V++ +++PG Q A + EP + K ++ E EP+
Sbjct: 92 VKKKRKKKEPGDQEGAAKGSKDREPKPKRKREPKEPKEPRKAKEPK 137
Score = 41 (19.5 bits), Expect = 1.1e-69, Sum P(5) = 1.1e-69
Identities = 15/56 (26%), Positives = 28/56 (50%)
Query: 1525 RKRHDGSTELKTCESIFIDLEQKSASRSKMGGKISITAMP-VKRVLMIKPEKLKKG 1579
R++ D S E+ + F D ++ R K GK+ ++++ +RV I E +G
Sbjct: 2363 RQQADYSLEVPGFGANFSDKPKQRRPRCKEPGKLDVSSLSGEERVPAIPKEPGLRG 2418
Score = 41 (19.5 bits), Expect = 1.1e-69, Sum P(5) = 1.1e-69
Identities = 17/82 (20%), Positives = 34/82 (41%)
Query: 1867 AFPANDAKLRSVPKSQSLGKHKLSLSD-SVKCPKSKLRKTSMEHSEIQHSSPEPVSNQSV 1925
AFPA A + K H L + ++ PK+ + + EP + +
Sbjct: 1929 AFPA-PAACQCHCKHMERWMHGLENDEFEIEKPKAYIPDLFKSKTNTIAMEGEPTA---I 1984
Query: 1926 ATKDANLRFDLIQEAWLEDMDG 1947
++ ++ +L++E W E +G
Sbjct: 1985 PSQPFKVKHELLKEPWKESAEG 2006
Score = 39 (18.8 bits), Expect = 2.0e-37, Sum P(3) = 2.0e-37
Identities = 13/40 (32%), Positives = 21/40 (52%)
Query: 925 GLVESFMFAIPAARAPAPVCWCSKSGASVFLQPTYKEKCS 964
GL+ M + APA + +KSG +V + T ++K S
Sbjct: 2536 GLLSPPMATTCTSTAPASLSSTTKSGTAV-TEKTAEDKPS 2574
Score = 38 (18.4 bits), Expect = 1.7e-23, Sum P(5) = 1.7e-23
Identities = 11/35 (31%), Positives = 17/35 (48%)
Query: 880 LRELLTVKHPVCDILQQKTVRRSYLYSSKLADIVL 914
L E+ V+ P D Q+ R Y S++L + L
Sbjct: 432 LPEIKHVERPASDSWQKLEKSREYKNSNQLREYQL 466
Score = 37 (18.1 bits), Expect = 4.1e-69, Sum P(5) = 4.1e-69
Identities = 11/55 (20%), Positives = 25/55 (45%)
Query: 25 NISKDVKKFWMKIEKLVLYKHQMEVDVRKKKALDKQLEFLLGQTERYSSMLAENL 79
++ + W K+EK YK+ ++ ++ L+ L R + +LA+ +
Sbjct: 437 HVERPASDSWQKLEKSREYKNSNQL---REYQLEGMNWLLFNWYNRKNCILADEM 488
>CGD|CAL0002614 [details] [associations]
symbol:orf19.4502 species:5476 "Candida albicans" [GO:0000228
"nuclear chromosome" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0017025 "TBP-class protein binding" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0045898 "regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
[GO:0042790 "transcription of nuclear large rRNA transcript from
RNA polymerase I promoter" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR016024 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 CGD:CAL0002614 GO:GO:0005524 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0003677 GO:GO:0004386
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
KO:K15192 InterPro:IPR022707 Pfam:PF12054 EMBL:AACQ01000142
EMBL:AACQ01000141 RefSeq:XP_712896.1 RefSeq:XP_712928.1
ProteinModelPortal:Q59TC9 STRING:Q59TC9 GeneID:3645462
GeneID:3645500 KEGG:cal:CaO19.11978 KEGG:cal:CaO19.4502
Uniprot:Q59TC9
Length = 1915
Score = 452 (164.2 bits), Expect = 1.2e-69, Sum P(2) = 1.2e-69
Identities = 111/325 (34%), Positives = 178/325 (54%)
Query: 441 TQVRT-KFPFLLKFPLREYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTIAMLA--HL 497
T++++ P +K LR+YQ G++WL + + L+GIL D+MGLGKT+ TI +++ H
Sbjct: 1287 TKIKSFDLPVTIKATLRKYQQEGVNWLAFLNKYHLHGILCDDMGLGKTLQTICIVSSDHH 1346
Query: 498 ACEKGI--WG-------PHLIVVPTSVMLNWETEFLKWCPAFKILTYFGSAKERKFKRQG 548
E+ G P L++ P S++ +WE E ++ P K+L Y GS R +G
Sbjct: 1347 IREENFKETGSAEYRKLPSLVICPPSLIGHWEQEINQYAPFMKVLVYAGSPSIR-IPLRG 1405
Query: 549 WLKPNSFHVCITTYRLIIQDSKVFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRI 608
+ P++ V +T+Y + D + + + Y +LDE H+IKN S+ +++ ++ R+
Sbjct: 1406 QI-PDA-DVVVTSYDVCRNDVESLTKHDYNYCVLDEGHIIKNASSKLSKSVKRVKAEHRL 1463
Query: 609 LLTGTPLQNDLMELWSLMHFLMPHIFQSHQEFKDWFCNPISGMVEGQEKVNKE-----VV 663
+L+GTP+QN+++ELWSL FLMP + + F + F PI+ + ++ +
Sbjct: 1464 ILSGTPIQNNVLELWSLFDFLMPGFLGTEKVFHEKFAKPIAASRNSKTSSKEQEAGALAM 1523
Query: 664 DRLHNVLRPFILRRLKRDVEKQLPMKQEHVIYCRLSKRQRNLYEDFIASS-ETQAT-LAS 721
+ LH + PF+LRRLK DV LP K YC LS Q+ LY+DF + ET T +
Sbjct: 1524 ESLHKQVLPFMLRRLKEDVLSDLPPKIIQDYYCELSDLQKKLYKDFAKTQKETIKTDVQG 1583
Query: 722 ANFFGMISVIMQL---RKVCNHPDL 743
+ G V L RK+CNHP L
Sbjct: 1584 SEKEGKTHVFQALQYMRKLCNHPAL 1608
Score = 360 (131.8 bits), Expect = 1.2e-69, Sum P(2) = 1.2e-69
Identities = 76/187 (40%), Positives = 117/187 (62%)
Query: 1013 HRALIFTQMTKMLDILE-EFISLY--GYTYMRLDGSTQPEERQTLMQRFNTNPKIFLFIL 1069
HRALIF Q+ MLDI+E E + Y T+MRLDGST P +RQ+++++FN +P I + +L
Sbjct: 1687 HRALIFCQLKDMLDIVENELLRKYLPSVTFMRLDGSTDPRDRQSIVRKFNEDPSIDVLLL 1746
Query: 1070 STRSGGVGINLVGADTVIFYDSDWNPAMDQQAQDRCHRIGQTREVHIYRLISESTIEENI 1129
+T+ GG+G+NL GADTVIF + DWNP D QA DR HR+GQ + V++YRLI++ T+EE I
Sbjct: 1747 TTKVGGLGLNLTGADTVIFVEHDWNPMNDLQAMDRAHRLGQKKVVNVYRLITKDTLEEKI 1806
Query: 1130 LKKANQKRALDDLVI--QSGGYNT-EFFKKLDPMELFSGHRTLPMKTMQKEKAINNGNEV 1186
+ K + ++ Q+ G + + + LD ++ ++ KE+ NG
Sbjct: 1807 MGLQKFKMNIASTIVNQQNAGLQSMDTNQLLDLFDVDDTGNGAKVEEPVKEETDTNGGGG 1866
Query: 1187 SLSNADV 1193
+ +N D+
Sbjct: 1867 ASTNGDI 1873
Score = 51 (23.0 bits), Expect = 2.5e-27, Sum P(2) = 2.5e-27
Identities = 18/69 (26%), Positives = 33/69 (47%)
Query: 619 LMELWSLMHFLMPHIFQSHQEFKDWFCNPISGMVEGQEKVNKEVVDRLHNVLRPF-ILRR 677
LM L L+H P +F + K+ P+ + + +E E+ + +V+ ILR
Sbjct: 1070 LMTLDQLVHIYGPKLFDQVTKLKEMMIEPLRYLSKTEEVSQDELKGQ--SVIDALGILRA 1127
Query: 678 LKRDVEKQL 686
L ++K+L
Sbjct: 1128 LFPKMDKEL 1136
Score = 41 (19.5 bits), Expect = 4.3e-36, Sum P(2) = 4.3e-36
Identities = 9/29 (31%), Positives = 16/29 (55%)
Query: 1238 IEDTVRTDEPTDQGGCMTANNDNGMMLTG 1266
+E+ V+ + T+ GG + N D +TG
Sbjct: 1851 VEEPVKEETDTNGGGGASTNGDIPDDITG 1879
Score = 38 (18.4 bits), Expect = 5.6e-26, Sum P(2) = 5.6e-26
Identities = 7/17 (41%), Positives = 12/17 (70%)
Query: 729 SVIMQLRKVCNHPDLFE 745
SV+ L K+C+H ++ E
Sbjct: 547 SVMDLLAKLCSHKEVIE 563
Score = 37 (18.1 bits), Expect = 7.1e-26, Sum P(2) = 7.1e-26
Identities = 16/48 (33%), Positives = 25/48 (52%)
Query: 212 VVEEGHVQGNGNDLLAGSKLDTSGSLVRRCDE-INGGLSISENHLLDI 258
V++EGH+ N A SKL S V+ I G I +N++L++
Sbjct: 1436 VLDEGHIIKN-----ASSKLSKSVKRVKAEHRLILSGTPI-QNNVLEL 1477
>RGD|1311921 [details] [associations]
symbol:Chd7 "chromodomain helicase DNA binding protein 7"
species:10116 "Rattus norvegicus" [GO:0001501 "skeletal system
development" evidence=IEA;ISO] [GO:0001568 "blood vessel
development" evidence=ISO] [GO:0001701 "in utero embryonic
development" evidence=IEA;ISO] [GO:0003007 "heart morphogenesis"
evidence=IEA;ISO] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0007417 "central
nervous system development" evidence=IEA;ISO] [GO:0007512 "adult
heart development" evidence=IEA;ISO] [GO:0007605 "sensory
perception of sound" evidence=IEA;ISO] [GO:0007626 "locomotory
behavior" evidence=ISO] [GO:0007628 "adult walking behavior"
evidence=IEA;ISO] [GO:0008015 "blood circulation" evidence=IEA;ISO]
[GO:0021545 "cranial nerve development" evidence=IEA;ISO]
[GO:0030217 "T cell differentiation" evidence=IEA;ISO] [GO:0030540
"female genitalia development" evidence=IEA;ISO] [GO:0035116
"embryonic hindlimb morphogenesis" evidence=IEA;ISO] [GO:0040018
"positive regulation of multicellular organism growth"
evidence=IEA;ISO] [GO:0042471 "ear morphogenesis" evidence=ISO]
[GO:0042472 "inner ear morphogenesis" evidence=ISO] [GO:0043010
"camera-type eye development" evidence=ISO] [GO:0043584 "nose
development" evidence=IEA;ISO] [GO:0048752 "semicircular canal
morphogenesis" evidence=IEA;ISO] [GO:0048806 "genitalia
development" evidence=ISO] [GO:0048844 "artery morphogenesis"
evidence=IEA;ISO] [GO:0050890 "cognition" evidence=IEA;ISO]
[GO:0060021 "palate development" evidence=IEA;ISO] [GO:0060041
"retina development in camera-type eye" evidence=IEA;ISO]
[GO:0060123 "regulation of growth hormone secretion"
evidence=IEA;ISO] [GO:0060173 "limb development" evidence=ISO]
[GO:0060324 "face development" evidence=IEA;ISO] InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271 Pfam:PF07533
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
SMART:SM00592 SMART:SM00717 Pfam:PF00385 RGD:1311921 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0008015 GO:GO:0003007
GO:GO:0050890 GO:GO:0001701 GO:GO:0040018 GO:GO:0007417
GO:GO:0003682 GO:GO:0001501 GO:GO:0060041 GO:GO:0007605
GO:GO:0007512 GO:GO:0004386 GO:GO:0035116 GO:GO:0060324
GO:GO:0060021 GO:GO:0048844 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0030540
GO:GO:0007628 GO:GO:0030217 GO:GO:0048752 InterPro:IPR023780
CTD:55636 KO:K14437 OrthoDB:EOG4MCWZD GO:GO:0021545 GO:GO:0043584
GO:GO:0060123 GeneTree:ENSGT00560000077077 IPI:IPI00366595
RefSeq:XP_003749947.1 PRIDE:D3ZAP7 Ensembl:ENSRNOT00000008901
GeneID:312974 KEGG:rno:312974 UCSC:RGD:1311921 Uniprot:D3ZAP7
Length = 2985
Score = 483 (175.1 bits), Expect = 1.3e-69, Sum P(5) = 1.3e-69
Identities = 118/305 (38%), Positives = 168/305 (55%)
Query: 455 LREYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTIAMLAHLACEKGIWGPHLIVVPTS 514
LREYQ G++WL+ + N ILADEMGLGKTI +I L + KGI GP L++ P S
Sbjct: 957 LREYQLEGVNWLLFNWYNMRNCILADEMGLGKTIQSITFLYEIYL-KGIHGPFLVIAPLS 1015
Query: 515 VMLNWETEFLKWCPAFKILTYFGSAKERK--------FKR-QGWLKPNS--FHVCITTYR 563
+ NWE EF W ++ Y GS R+ FK QG + S FH ITT+
Sbjct: 1016 TIPNWEREFRTWTE-LNVVVYHGSQASRRTIQLYEMYFKDPQGRVIKGSYKFHAIITTFE 1074
Query: 564 LIIQDSKVFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPLQNDLMELW 623
+I+ D + W+ +++DEAH +KN + + L + + ++LLTGTPLQN + EL+
Sbjct: 1075 MILTDCPELRNIPWRCVVIDEAHRLKNRNCKLLEGLKMMDLEHKVLLTGTPLQNTVEELF 1134
Query: 624 SLMHFLMPHIFQSHQEFKDWFCNPISGMVEGQEKVNKEVVDRLHNVLRPFILRRLKRDVE 683
SL+HFL P F S F F G ++ +E+V K L +L+P +LRRLK DVE
Sbjct: 1135 SLLHFLEPSRFPSETTFMQEF-----GDLKTEEQVQK-----LQAILKPMMLRRLKEDVE 1184
Query: 684 KQLPMKQEHVIYCRLSKRQRNLYEDFIASSETQATLAS--ANFFGMISVIMQLRKVCNHP 741
K L K+E +I L+ Q+ Y + + T + AN +++ +M+LRK CNHP
Sbjct: 1185 KNLAPKEETIIEVELTNIQKKYYRAILEKNFTFLSKGGGQANVPNLLNTMMELRKCCNHP 1244
Query: 742 DLFEG 746
L G
Sbjct: 1245 YLING 1249
Score = 377 (137.8 bits), Expect = 1.3e-69, Sum P(5) = 1.3e-69
Identities = 80/163 (49%), Positives = 107/163 (65%)
Query: 985 FPDRRLIQFDCGKLQELAILLRKLKSDGHRALIFTQMTKMLDILEEFISLYGYTYMRLDG 1044
F + +IQ GKL + LL KLK+ GHR LIF+QM + LDILE+++ Y Y R+DG
Sbjct: 1269 FQLQAMIQA-AGKLVLIDKLLPKLKAGGHRVLIFSQMVRCLDILEDYLIQRRYPYERIDG 1327
Query: 1045 STQPEERQTLMQRFNT-NPKIFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQD 1103
+ RQ + RF+ + F+F+L TR+GG+GINL ADT I +DSDWNP D QAQ
Sbjct: 1328 RVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQA 1387
Query: 1104 RCHRIGQTREVHIYRLISESTIEENILKKANQKRALDDLVIQS 1146
RCHRIGQ++ V IYRLI+ ++ E + KA+ K LD V+QS
Sbjct: 1388 RCHRIGQSKSVKIYRLITRNSYEREMFDKASLKLGLDKAVLQS 1430
Score = 42 (19.8 bits), Expect = 1.3e-69, Sum P(5) = 1.3e-69
Identities = 9/26 (34%), Positives = 14/26 (53%)
Query: 193 DKVGRESSAEMGEDEAEPTVVEEGHV 218
D GR+S + + E + +V EG V
Sbjct: 765 DAAGRDSPSNTSQSEQQESVDAEGPV 790
Score = 42 (19.8 bits), Expect = 1.3e-69, Sum P(5) = 1.3e-69
Identities = 24/101 (23%), Positives = 43/101 (42%)
Query: 1176 KEKAINNGNEVSLSNADVEAALKCVEDEADYMA--LKRAEQEEAVDNQEFTEEAVGRPED 1233
KE++ E A ++ +C E EA + LK E ++ +E+ G ED
Sbjct: 2173 KERSDGKEEEEEAGGAK-DSRQEC-EAEASSVKGELKGVEGSGDPGSKSVSEK--GSEED 2228
Query: 1234 DELVIEDTVRTDEPTD-QGGCMTANN-----DNGMMLTGND 1268
+E +ED +++E + + G ++ N M T D
Sbjct: 2229 EEEKLEDDDKSEESSQPEAGAVSRGKTFDEESNASMSTARD 2269
Score = 39 (18.8 bits), Expect = 3.7e-37, Sum P(3) = 3.7e-37
Identities = 15/51 (29%), Positives = 22/51 (43%)
Query: 1580 NVWSRD-CVPSPDVWLPQEDAILCAVVHEYGPNWSLVSDILYGMTASGYYR 1629
N+ + D C+ W PQ D A H G + S+ I +T + Y R
Sbjct: 1363 NLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKSV--KIYRLITRNSYER 1411
Score = 39 (18.8 bits), Expect = 3.4e-23, Sum P(5) = 3.4e-23
Identities = 5/20 (25%), Positives = 11/20 (55%)
Query: 503 IWGPHLIVVPTSVMLNWETE 522
+WGP + VP + ++ +
Sbjct: 144 MWGPRAVQVPDQIRAPYQQQ 163
Score = 37 (18.1 bits), Expect = 1.3e-69, Sum P(5) = 1.3e-69
Identities = 10/47 (21%), Positives = 18/47 (38%)
Query: 1518 DSDSKLSRKRHDGSTELKTCESIFIDLEQKSASRSKMGGKISITAMP 1564
D SK K +D E + E + ++ +G + A+P
Sbjct: 2826 DGTSKAEEKGNDNEDENRDSEKSTDAVSAADSANGSVGAATAPAALP 2872
Score = 37 (18.1 bits), Expect = 3.4e-23, Sum P(5) = 3.4e-23
Identities = 14/55 (25%), Positives = 24/55 (43%)
Query: 924 IGLVESFMFAIPAARAPAPVCWCSKSGASVFLQ-PTYKE-KCSEVLSPLLFPIRP 976
+GL S R P V + S SG + LQ P + +++ + + P +P
Sbjct: 325 LGLTNSTPMNQSVPRYPNAVGFPSNSGQGLMLQQPIHSSGSLNQMNTQTMHPSQP 379
>MGI|MGI:2444748 [details] [associations]
symbol:Chd7 "chromodomain helicase DNA binding protein 7"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0001501 "skeletal system development"
evidence=ISO] [GO:0001568 "blood vessel development" evidence=IMP]
[GO:0001701 "in utero embryonic development" evidence=ISO;IMP]
[GO:0003007 "heart morphogenesis" evidence=ISO;IMP] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0007417 "central
nervous system development" evidence=ISO] [GO:0007512 "adult heart
development" evidence=IMP] [GO:0007605 "sensory perception of
sound" evidence=IMP] [GO:0007626 "locomotory behavior"
evidence=IMP] [GO:0007628 "adult walking behavior" evidence=IMP]
[GO:0008015 "blood circulation" evidence=IMP] [GO:0016568
"chromatin modification" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0016817 "hydrolase activity, acting on
acid anhydrides" evidence=IEA] [GO:0021545 "cranial nerve
development" evidence=ISO] [GO:0030217 "T cell differentiation"
evidence=ISO] [GO:0030540 "female genitalia development"
evidence=IMP] [GO:0035116 "embryonic hindlimb morphogenesis"
evidence=IMP] [GO:0040018 "positive regulation of multicellular
organism growth" evidence=IMP] [GO:0042471 "ear morphogenesis"
evidence=IMP] [GO:0042472 "inner ear morphogenesis"
evidence=ISO;IMP] [GO:0043010 "camera-type eye development"
evidence=IMP] [GO:0043584 "nose development" evidence=ISO;IMP]
[GO:0048752 "semicircular canal morphogenesis" evidence=IGI]
[GO:0048806 "genitalia development" evidence=ISO] [GO:0048844
"artery morphogenesis" evidence=IGI] [GO:0050890 "cognition"
evidence=ISO] [GO:0060021 "palate development" evidence=ISO;IMP]
[GO:0060041 "retina development in camera-type eye" evidence=ISO]
[GO:0060123 "regulation of growth hormone secretion" evidence=ISO]
[GO:0060173 "limb development" evidence=ISO] [GO:0060324 "face
development" evidence=ISO] InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001005 InterPro:IPR001650 InterPro:IPR006576
Pfam:PF00176 Pfam:PF00271 Pfam:PF07533 PROSITE:PS00690
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
SMART:SM00592 SMART:SM00717 MGI:MGI:2444748 Pfam:PF00385
GO:GO:0005524 GO:GO:0005634 GO:GO:0006355 GO:GO:0003677
GO:GO:0008015 GO:GO:0003007 GO:GO:0050890 GO:GO:0001701
GO:GO:0040018 GO:GO:0007417 GO:GO:0006351 GO:GO:0003682
GO:GO:0016568 GO:GO:0043010 GO:GO:0001501 GO:GO:0060041
GO:GO:0007605 GO:GO:0007512 GO:GO:0004386 GO:GO:0035116
GO:GO:0060324 GO:GO:0060021 GO:GO:0048844 InterPro:IPR016197
SUPFAM:SSF54160 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0030540 GO:GO:0007628 GO:GO:0030217
GO:GO:0048752 InterPro:IPR023780 PROSITE:PS00598 HOVERGEN:HBG081150
CTD:55636 HOGENOM:HOG000246942 KO:K14437 OrthoDB:EOG4MCWZD
OMA:TFGVIFD GO:GO:0021545 GO:GO:0043584 GO:GO:0060123 EMBL:AK042727
EMBL:AK171051 EMBL:AK171857 EMBL:AK172025 EMBL:AL732627
EMBL:AL805903 EMBL:BC034239 IPI:IPI00345676 IPI:IPI00666779
IPI:IPI00849588 RefSeq:NP_001074886.1 UniGene:Mm.138792
ProteinModelPortal:A2AJK6 SMR:A2AJK6 IntAct:A2AJK6 STRING:A2AJK6
PhosphoSite:A2AJK6 PaxDb:A2AJK6 PRIDE:A2AJK6
Ensembl:ENSMUST00000039267 Ensembl:ENSMUST00000051558
Ensembl:ENSMUST00000127476 GeneID:320790 KEGG:mmu:320790
UCSC:uc008rxy.1 UCSC:uc008rya.1 GeneTree:ENSGT00560000077077
InParanoid:A2AJK6 NextBio:397435 Bgee:A2AJK6 CleanEx:MM_CHD7
Genevestigator:A2AJK6 Uniprot:A2AJK6
Length = 2986
Score = 483 (175.1 bits), Expect = 1.3e-69, Sum P(5) = 1.3e-69
Identities = 118/305 (38%), Positives = 168/305 (55%)
Query: 455 LREYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTIAMLAHLACEKGIWGPHLIVVPTS 514
LREYQ G++WL+ + N ILADEMGLGKTI +I L + KGI GP L++ P S
Sbjct: 958 LREYQLEGVNWLLFNWYNMRNCILADEMGLGKTIQSITFLYEIYL-KGIHGPFLVIAPLS 1016
Query: 515 VMLNWETEFLKWCPAFKILTYFGSAKERK--------FKR-QGWLKPNS--FHVCITTYR 563
+ NWE EF W ++ Y GS R+ FK QG + S FH ITT+
Sbjct: 1017 TIPNWEREFRTWTE-LNVVVYHGSQASRRTIQLYEMYFKDPQGRVIKGSYKFHAIITTFE 1075
Query: 564 LIIQDSKVFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPLQNDLMELW 623
+I+ D + W+ +++DEAH +KN + + L + + ++LLTGTPLQN + EL+
Sbjct: 1076 MILTDCPELRNIPWRCVVIDEAHRLKNRNCKLLEGLKMMDLEHKVLLTGTPLQNTVEELF 1135
Query: 624 SLMHFLMPHIFQSHQEFKDWFCNPISGMVEGQEKVNKEVVDRLHNVLRPFILRRLKRDVE 683
SL+HFL P F S F F G ++ +E+V K L +L+P +LRRLK DVE
Sbjct: 1136 SLLHFLEPSRFPSETTFMQEF-----GDLKTEEQVQK-----LQAILKPMMLRRLKEDVE 1185
Query: 684 KQLPMKQEHVIYCRLSKRQRNLYEDFIASSETQATLAS--ANFFGMISVIMQLRKVCNHP 741
K L K+E +I L+ Q+ Y + + T + AN +++ +M+LRK CNHP
Sbjct: 1186 KNLAPKEETIIEVELTNIQKKYYRAILEKNFTFLSKGGGQANVPNLLNTMMELRKCCNHP 1245
Query: 742 DLFEG 746
L G
Sbjct: 1246 YLING 1250
Score = 377 (137.8 bits), Expect = 1.3e-69, Sum P(5) = 1.3e-69
Identities = 80/163 (49%), Positives = 107/163 (65%)
Query: 985 FPDRRLIQFDCGKLQELAILLRKLKSDGHRALIFTQMTKMLDILEEFISLYGYTYMRLDG 1044
F + +IQ GKL + LL KLK+ GHR LIF+QM + LDILE+++ Y Y R+DG
Sbjct: 1270 FQLQAMIQA-AGKLVLIDKLLPKLKAGGHRVLIFSQMVRCLDILEDYLIQRRYPYERIDG 1328
Query: 1045 STQPEERQTLMQRFNT-NPKIFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQD 1103
+ RQ + RF+ + F+F+L TR+GG+GINL ADT I +DSDWNP D QAQ
Sbjct: 1329 RVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQA 1388
Query: 1104 RCHRIGQTREVHIYRLISESTIEENILKKANQKRALDDLVIQS 1146
RCHRIGQ++ V IYRLI+ ++ E + KA+ K LD V+QS
Sbjct: 1389 RCHRIGQSKSVKIYRLITRNSYEREMFDKASLKLGLDKAVLQS 1431
Score = 42 (19.8 bits), Expect = 1.3e-69, Sum P(5) = 1.3e-69
Identities = 9/26 (34%), Positives = 14/26 (53%)
Query: 193 DKVGRESSAEMGEDEAEPTVVEEGHV 218
D GR+S + + E + +V EG V
Sbjct: 766 DAAGRDSPSNTSQSEQQESVDAEGPV 791
Score = 41 (19.5 bits), Expect = 1.3e-69, Sum P(5) = 1.3e-69
Identities = 19/82 (23%), Positives = 37/82 (45%)
Query: 1176 KEKAINNGNEVSLSNADVEAALKC-VEDEADYMALKRAEQEEAVDNQEFTEEAVGRPEDD 1234
KE++ E A + +C VE + LK E ++ +E+ G ED+
Sbjct: 2174 KERSDGKEEEEEAGGAK-DGKQECEVEASSVKGELKGVEGSADPGSKSVSEK--GSEEDE 2230
Query: 1235 ELVIEDTVRTDEPTD-QGGCMT 1255
E +ED +++E + + G ++
Sbjct: 2231 EEKLEDDDKSEESSQPEAGAVS 2252
Score = 39 (18.8 bits), Expect = 3.7e-37, Sum P(3) = 3.7e-37
Identities = 15/51 (29%), Positives = 22/51 (43%)
Query: 1580 NVWSRD-CVPSPDVWLPQEDAILCAVVHEYGPNWSLVSDILYGMTASGYYR 1629
N+ + D C+ W PQ D A H G + S+ I +T + Y R
Sbjct: 1364 NLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKSV--KIYRLITRNSYER 1412
Score = 39 (18.8 bits), Expect = 2.2e-24, Sum P(4) = 2.2e-24
Identities = 5/20 (25%), Positives = 11/20 (55%)
Query: 503 IWGPHLIVVPTSVMLNWETE 522
+WGP + VP + ++ +
Sbjct: 143 MWGPRAVQVPDQIRAPYQQQ 162
Score = 38 (18.4 bits), Expect = 1.3e-69, Sum P(5) = 1.3e-69
Identities = 10/47 (21%), Positives = 18/47 (38%)
Query: 1518 DSDSKLSRKRHDGSTELKTCESIFIDLEQKSASRSKMGGKISITAMP 1564
D SK K +D E + E + ++ +G + A+P
Sbjct: 2827 DGTSKAEEKGNDNEDENRDSEKSTDTVSAADSANGSVGAATAPAALP 2873
>UNIPROTKB|D3ZZZ1 [details] [associations]
symbol:Ercc6 "Protein Ercc6" species:10116 "Rattus
norvegicus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 RGD:1311509
GO:GO:0005524 GO:GO:0008630 GO:GO:0005730 GO:GO:0006284
GO:GO:0003677 GO:GO:0009636 GO:GO:0003682 GO:GO:0045494
GO:GO:0010332 GO:GO:0004386 GO:GO:0010165 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0010224 GO:GO:0007257
GO:GO:0006283 GO:GO:0008094 GO:GO:0008023 GO:GO:0032786
GO:GO:0006290 GO:GO:0007256 GO:GO:0000303 IPI:IPI00358023
Ensembl:ENSRNOT00000038493 ArrayExpress:D3ZZZ1 Uniprot:D3ZZZ1
Length = 1475
Score = 466 (169.1 bits), Expect = 1.3e-69, Sum P(4) = 1.3e-69
Identities = 128/326 (39%), Positives = 171/326 (52%)
Query: 446 KFP-FLLKFPLREYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTIAMLAHLACEK--- 501
K P FL K L +YQ G+ WL ++ ++ GIL DEMGLGKTI IA LA L+ K
Sbjct: 492 KVPGFLFK-KLFKYQQTGVRWLWELHCQQAGGILGDEMGLGKTIQIIAFLAGLSYSKIRT 550
Query: 502 --------GIWGPHLIVVPTSVMLNWETEFLKWCPAFK--ILTYFGSAKERKFKRQGWLK 551
G+ GP LIV PT+VM W EF W P F+ IL GS RK + +
Sbjct: 551 RGSNYRFEGL-GPTLIVCPTTVMHQWVKEFHTWWPPFRVAILHETGSCAHRKERLVRDIV 609
Query: 552 PNSFHVCITTYRLI--IQDSKVFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRIL 609
+ V IT+Y I +QD R W Y+ILDE H I+N + F + RI+
Sbjct: 610 -HCHGVLITSYSYIRLMQDD--ISRHDWHYVILDEGHKIRNPNAAVTLACKQFRTPHRII 666
Query: 610 LTGTPLQNDLMELWSLMHFLMPHIFQSHQEFKDWFCNPIS-GMVEGQEKVNKEVVDRLHN 668
L+G+P+QN+L ELWSL F P + F + F PI+ G V + +
Sbjct: 667 LSGSPMQNNLRELWSLFDFTFPGKLGTLPVFMEQFSVPITMGGYSNASPVQVKTAYKCAC 726
Query: 669 VLR----PFILRRLKRDVEKQL--PMKQEHVIYCRLSKRQRNLYEDFIASSETQATLASA 722
VLR P++LRR+K DV+ L P K E V++CRL+ Q +Y++FI S L
Sbjct: 727 VLRDTINPYLLRRMKSDVKMSLSLPDKNEQVLFCRLTDEQHKVYQNFIDSKAVYRILNGE 786
Query: 723 NFFGMISVIMQLRKVCNHPDLFEGRP 748
N + S ++ LRK+CNHPDLF G P
Sbjct: 787 N--QIFSGLVALRKICNHPDLFSGGP 810
Score = 357 (130.7 bits), Expect = 1.3e-69, Sum P(4) = 1.3e-69
Identities = 72/169 (42%), Positives = 109/169 (64%)
Query: 996 GKLQELAILLRKLKSDGHRALIFTQMTKMLDILEEFISLYGYTYMRLDGSTQPEERQTLM 1055
GK+ + LL+ G R L+F+Q +ML ILE F+ + Y+Y+++DG+T RQ L+
Sbjct: 833 GKMIVVESLLKIWHKQGQRVLLFSQSRQMLHILEVFLRAHKYSYLKMDGTTTIASRQPLI 892
Query: 1056 QRFNTNPKIFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQDRCHRIGQTREVH 1115
++N + IF+F+L+TR GG+G+NL GA+ VI YD DWNP+ D QA++R RIGQ ++V
Sbjct: 893 TKYNEDTSIFVFLLTTRVGGLGVNLTGANRVIIYDPDWNPSTDTQARERAWRIGQKKQVT 952
Query: 1116 IYRLISESTIEENILKKANQKRALDDLVIQSGGYNTEFFKKLDPMELFS 1164
+YRL++ TIEE I + K+ L + V++ FFK D ELF+
Sbjct: 953 VYRLLTAGTIEEKIYHRQIFKQFLTNRVLKDPKQR-RFFKSNDLYELFT 1000
Score = 51 (23.0 bits), Expect = 1.3e-69, Sum P(4) = 1.3e-69
Identities = 30/124 (24%), Positives = 53/124 (42%)
Query: 27 SKDVKKFWMKIEKLVLYKHQMEVDVRKKKALDKQLEFLLGQTE-----RYSSMLAEN--- 78
++D+ + K++ + K+ E ++K A K+L+ +LG E + S+ E+
Sbjct: 164 NRDINR---KLDSVKRQKYNKEQQLKKITAKQKRLQAILGGAEVHVELDHGSLEEEDAEP 220
Query: 79 ----LVDSHKPVQQSPMREQPGIQYKEADENGAEEPGVQSKEADEDDAEQHSGFEPQL-D 133
L P Q+S E I+ + G P Q K+ + + SGFE L D
Sbjct: 221 GPSCLGSMLMPAQESAWEEL--IRTGQMTPFGTPAPQKQEKKPRKIMLNEASGFEKYLAD 278
Query: 134 AADI 137
A +
Sbjct: 279 QAQL 282
Score = 41 (19.5 bits), Expect = 6.6e-25, Sum P(3) = 6.6e-25
Identities = 14/50 (28%), Positives = 24/50 (48%)
Query: 655 QEKVNKEVVDRLHNVLRPFILRRLKRDVEKQLPMKQEHVIYCRLSKRQRN 704
+E V ++V +H R + +R D EK+ + ++ C S RQ N
Sbjct: 106 EEGVLQQVDSAMHEASR--VAQRA--DAEKEYQSVLDDLMSCTTSLRQIN 151
Score = 39 (18.8 bits), Expect = 1.3e-69, Sum P(4) = 1.3e-69
Identities = 12/39 (30%), Positives = 21/39 (53%)
Query: 1644 ELIQRYILSVPDNSINEKTSNVGSGKALLKVTEDNVRTL 1682
+L + + L+ PD S +TS + +G T N++TL
Sbjct: 994 DLYELFTLTSPDASQGTETSAIFAG------TGSNIQTL 1026
>UNIPROTKB|F1PTH3 [details] [associations]
symbol:CHD6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001005
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR006576
Pfam:PF00176 Pfam:PF00271 Pfam:PF07533 PROSITE:PS00690
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
SMART:SM00717 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
GO:GO:0003677 GO:GO:0003682 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR023780 OMA:CKWATME GeneTree:ENSGT00560000077077
EMBL:AAEX03013942 EMBL:AAEX03013943 Ensembl:ENSCAFT00000014716
Uniprot:F1PTH3
Length = 2715
Score = 484 (175.4 bits), Expect = 1.4e-69, Sum P(4) = 1.4e-69
Identities = 120/305 (39%), Positives = 170/305 (55%)
Query: 455 LREYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTIAMLAHLACEKGIWGPHLIVVPTS 514
LREYQ G++WL+ + R N ILADEMGLGKTI +I L+ + +GI GP LI+ P S
Sbjct: 461 LREYQLEGMNWLLFNWYNRKNCILADEMGLGKTIQSITFLSEIFL-RGIHGPFLIIAPLS 519
Query: 515 VMLNWETEFLKWCPAFKILTYFGSAKERKFKRQGWL-------KPNS----FHVCITTYR 563
+ NWE EF W + Y GS R+ +Q + P S FHV ITT+
Sbjct: 520 TITNWEREFRTWTE-MNAIVYHGSQISRQMIQQYEMVYRDAQGNPLSGVFKFHVVITTFE 578
Query: 564 LIIQDSKVFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPLQNDLMELW 623
+I+ D K+ W +I+DEAH +KN + + L + ++LLTGTPLQN + EL+
Sbjct: 579 MILADCPELKKIHWSCVIIDEAHRLKNRNCKLLEGLKLMALEHKVLLTGTPLQNSVEELF 638
Query: 624 SLMHFLMPHIFQSHQEFKDWFCNPISGMVEGQEKVNKEVVDRLHNVLRPFILRRLKRDVE 683
SL++FL P F S F + F G ++ +E+V K L ++L+P +LRRLK DVE
Sbjct: 639 SLLNFLEPSQFPSETAFLEEF-----GDLKTEEQVKK-----LQSILKPMMLRRLKDDVE 688
Query: 684 KQLPMKQEHVIYCRLSKRQRNLYEDFIASSETQATLASA--NFFGMISVIMQLRKVCNHP 741
K L KQE +I L+ Q+ Y + + + T + N +I+ +M+LRK CNHP
Sbjct: 689 KNLAPKQETIIEVELTNIQKKYYRAILEKNFSFLTKGANQHNMPNLINTMMELRKCCNHP 748
Query: 742 DLFEG 746
L G
Sbjct: 749 YLING 753
Score = 366 (133.9 bits), Expect = 1.4e-69, Sum P(4) = 1.4e-69
Identities = 81/181 (44%), Positives = 113/181 (62%)
Query: 985 FPDRRLIQFDCGKLQELAILLRKLKSDGHRALIFTQMTKMLDILEEFISLYGYTYMRLDG 1044
F + +IQ GKL + LL KL + GH+ LIF+QM + LDILE+++ YTY R+DG
Sbjct: 773 FQLQAMIQA-AGKLVLIDKLLPKLIAGGHKVLIFSQMVRCLDILEDYLIQRRYTYERIDG 831
Query: 1045 STQPEERQTLMQRF-NTNPKIFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQD 1103
+ RQ + RF + F+F+L TR+GG+GINL ADT I +DSDWNP D QAQ
Sbjct: 832 RVRGNLRQAAIDRFCKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQA 891
Query: 1104 RCHRIGQTREVHIYRLISESTIEENILKKANQKRALDDLVIQSGGY--NTEFFKKLDPME 1161
RCHRIGQ++ V +YRLI+ ++ E + KA+ K LD V+Q +T ++L ME
Sbjct: 892 RCHRIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQDINRKGSTNGVQQLSKME 951
Query: 1162 L 1162
+
Sbjct: 952 V 952
Score = 46 (21.3 bits), Expect = 9.8e-38, Sum P(3) = 9.8e-38
Identities = 14/40 (35%), Positives = 22/40 (55%)
Query: 925 GLVESFMFAIPAARAPAPVCWCSKSGASVFLQPTYKEKCS 964
GL+ + M A + APAP+ +KSG + T ++K S
Sbjct: 2536 GLLNAPMAAACTSTAPAPLPSTTKSGTPA-TEKTVEDKPS 2574
Score = 39 (18.8 bits), Expect = 1.4e-69, Sum P(4) = 1.4e-69
Identities = 14/56 (25%), Positives = 27/56 (48%)
Query: 1525 RKRHDGSTELKTCESIFIDLEQKSASRSKMGGKISITAMP-VKRVLMIKPEKLKKG 1579
R++ D S E+ + F D ++ R K GK+ + ++ +RV + E +G
Sbjct: 2363 RQQADYSLEVPGFGANFSDKPKQRRPRCKEPGKLDVNSLSGEERVPAVPKEPGLRG 2418
Score = 38 (18.4 bits), Expect = 1.4e-69, Sum P(4) = 1.4e-69
Identities = 11/46 (23%), Positives = 19/46 (41%)
Query: 86 VQQSPMREQPGIQYKEADENGAEEPGVQSKEADEDDAEQHSGFEPQ 131
V++ ++ PG Q A + EP + K + E EP+
Sbjct: 92 VKKKRKKKDPGEQDGAAKGSKDREPKPKRKREPREPKEPRKAKEPK 137
Score = 38 (18.4 bits), Expect = 4.0e-23, Sum P(4) = 4.0e-23
Identities = 11/35 (31%), Positives = 17/35 (48%)
Query: 880 LRELLTVKHPVCDILQQKTVRRSYLYSSKLADIVL 914
L E+ V+ P D Q+ R Y S++L + L
Sbjct: 432 LPEIKHVERPASDSWQKLEKSREYKNSNQLREYQL 466
Score = 37 (18.1 bits), Expect = 1.8e-69, Sum P(4) = 1.8e-69
Identities = 11/55 (20%), Positives = 25/55 (45%)
Query: 25 NISKDVKKFWMKIEKLVLYKHQMEVDVRKKKALDKQLEFLLGQTERYSSMLAENL 79
++ + W K+EK YK+ ++ ++ L+ L R + +LA+ +
Sbjct: 437 HVERPASDSWQKLEKSREYKNSNQL---REYQLEGMNWLLFNWYNRKNCILADEM 488
>UNIPROTKB|J9P0F6 [details] [associations]
symbol:CHD6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001005
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR006576
Pfam:PF00176 Pfam:PF00271 Pfam:PF07533 PROSITE:PS00690
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
SMART:SM00717 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
GO:GO:0003677 GO:GO:0003682 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR023780 CTD:84181 KO:K14436 GeneTree:ENSGT00560000077077
EMBL:AAEX03013942 EMBL:AAEX03013943 RefSeq:XP_534421.3
Ensembl:ENSCAFT00000048852 GeneID:477230 KEGG:cfa:477230
Uniprot:J9P0F6
Length = 2715
Score = 484 (175.4 bits), Expect = 1.4e-69, Sum P(4) = 1.4e-69
Identities = 120/305 (39%), Positives = 170/305 (55%)
Query: 455 LREYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTIAMLAHLACEKGIWGPHLIVVPTS 514
LREYQ G++WL+ + R N ILADEMGLGKTI +I L+ + +GI GP LI+ P S
Sbjct: 461 LREYQLEGMNWLLFNWYNRKNCILADEMGLGKTIQSITFLSEIFL-RGIHGPFLIIAPLS 519
Query: 515 VMLNWETEFLKWCPAFKILTYFGSAKERKFKRQGWL-------KPNS----FHVCITTYR 563
+ NWE EF W + Y GS R+ +Q + P S FHV ITT+
Sbjct: 520 TITNWEREFRTWTE-MNAIVYHGSQISRQMIQQYEMVYRDAQGNPLSGVFKFHVVITTFE 578
Query: 564 LIIQDSKVFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPLQNDLMELW 623
+I+ D K+ W +I+DEAH +KN + + L + ++LLTGTPLQN + EL+
Sbjct: 579 MILADCPELKKIHWSCVIIDEAHRLKNRNCKLLEGLKLMALEHKVLLTGTPLQNSVEELF 638
Query: 624 SLMHFLMPHIFQSHQEFKDWFCNPISGMVEGQEKVNKEVVDRLHNVLRPFILRRLKRDVE 683
SL++FL P F S F + F G ++ +E+V K L ++L+P +LRRLK DVE
Sbjct: 639 SLLNFLEPSQFPSETAFLEEF-----GDLKTEEQVKK-----LQSILKPMMLRRLKDDVE 688
Query: 684 KQLPMKQEHVIYCRLSKRQRNLYEDFIASSETQATLASA--NFFGMISVIMQLRKVCNHP 741
K L KQE +I L+ Q+ Y + + + T + N +I+ +M+LRK CNHP
Sbjct: 689 KNLAPKQETIIEVELTNIQKKYYRAILEKNFSFLTKGANQHNMPNLINTMMELRKCCNHP 748
Query: 742 DLFEG 746
L G
Sbjct: 749 YLING 753
Score = 366 (133.9 bits), Expect = 1.4e-69, Sum P(4) = 1.4e-69
Identities = 81/181 (44%), Positives = 113/181 (62%)
Query: 985 FPDRRLIQFDCGKLQELAILLRKLKSDGHRALIFTQMTKMLDILEEFISLYGYTYMRLDG 1044
F + +IQ GKL + LL KL + GH+ LIF+QM + LDILE+++ YTY R+DG
Sbjct: 773 FQLQAMIQA-AGKLVLIDKLLPKLIAGGHKVLIFSQMVRCLDILEDYLIQRRYTYERIDG 831
Query: 1045 STQPEERQTLMQRF-NTNPKIFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQD 1103
+ RQ + RF + F+F+L TR+GG+GINL ADT I +DSDWNP D QAQ
Sbjct: 832 RVRGNLRQAAIDRFCKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQA 891
Query: 1104 RCHRIGQTREVHIYRLISESTIEENILKKANQKRALDDLVIQSGGY--NTEFFKKLDPME 1161
RCHRIGQ++ V +YRLI+ ++ E + KA+ K LD V+Q +T ++L ME
Sbjct: 892 RCHRIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQDINRKGSTNGVQQLSKME 951
Query: 1162 L 1162
+
Sbjct: 952 V 952
Score = 46 (21.3 bits), Expect = 9.8e-38, Sum P(3) = 9.8e-38
Identities = 14/40 (35%), Positives = 22/40 (55%)
Query: 925 GLVESFMFAIPAARAPAPVCWCSKSGASVFLQPTYKEKCS 964
GL+ + M A + APAP+ +KSG + T ++K S
Sbjct: 2536 GLLNAPMAAACTSTAPAPLPSTTKSGTPA-TEKTVEDKPS 2574
Score = 39 (18.8 bits), Expect = 1.4e-69, Sum P(4) = 1.4e-69
Identities = 14/56 (25%), Positives = 27/56 (48%)
Query: 1525 RKRHDGSTELKTCESIFIDLEQKSASRSKMGGKISITAMP-VKRVLMIKPEKLKKG 1579
R++ D S E+ + F D ++ R K GK+ + ++ +RV + E +G
Sbjct: 2363 RQQADYSLEVPGFGANFSDKPKQRRPRCKEPGKLDVNSLSGEERVPAVPKEPGLRG 2418
Score = 38 (18.4 bits), Expect = 1.4e-69, Sum P(4) = 1.4e-69
Identities = 11/46 (23%), Positives = 19/46 (41%)
Query: 86 VQQSPMREQPGIQYKEADENGAEEPGVQSKEADEDDAEQHSGFEPQ 131
V++ ++ PG Q A + EP + K + E EP+
Sbjct: 92 VKKKRKKKDPGEQDGAAKGSKDREPKPKRKREPREPKEPRKAKEPK 137
Score = 38 (18.4 bits), Expect = 4.0e-23, Sum P(4) = 4.0e-23
Identities = 11/35 (31%), Positives = 17/35 (48%)
Query: 880 LRELLTVKHPVCDILQQKTVRRSYLYSSKLADIVL 914
L E+ V+ P D Q+ R Y S++L + L
Sbjct: 432 LPEIKHVERPASDSWQKLEKSREYKNSNQLREYQL 466
Score = 37 (18.1 bits), Expect = 1.8e-69, Sum P(4) = 1.8e-69
Identities = 11/55 (20%), Positives = 25/55 (45%)
Query: 25 NISKDVKKFWMKIEKLVLYKHQMEVDVRKKKALDKQLEFLLGQTERYSSMLAENL 79
++ + W K+EK YK+ ++ ++ L+ L R + +LA+ +
Sbjct: 437 HVERPASDSWQKLEKSREYKNSNQL---REYQLEGMNWLLFNWYNRKNCILADEM 488
>ASPGD|ASPL0000068126 [details] [associations]
symbol:cshA species:162425 "Emericella nidulans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IEA] [GO:0006283 "transcription-coupled
nucleotide-excision repair" evidence=IEA] InterPro:IPR000330
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003677 EMBL:BN001304
GO:GO:0004386 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 EMBL:AACD01000119 HOGENOM:HOG000170952 KO:K10841
OrthoDB:EOG44TSGZ RefSeq:XP_664707.1 ProteinModelPortal:Q5AX77
STRING:Q5AX77 EnsemblFungi:CADANIAT00000362 GeneID:2869817
KEGG:ani:AN7103.2 OMA:HSALEHD Uniprot:Q5AX77
Length = 1193
Score = 381 (139.2 bits), Expect = 1.6e-69, Sum P(4) = 1.6e-69
Identities = 92/242 (38%), Positives = 136/242 (56%)
Query: 996 GKLQELAILLRKLKSDGHRALIFTQMTKMLDILEEFI-SLYGYTYMRLDGSTQPEERQTL 1054
GK+Q + LL K GH+ L+F Q MLDILE+F+ SL G+ Y R+DG+T + RQT+
Sbjct: 736 GKMQVVRSLLELWKETGHKTLLFAQHRIMLDILEKFVKSLSGFNYRRMDGTTPIQHRQTM 795
Query: 1055 MQRFNTNPKIFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQDRCHRIGQTREV 1114
+ FN +P + +F+L+T+ GG+G+NL GAD VI YD DWNP+ D QA++R R+GQ R+V
Sbjct: 796 VDEFNKDPDLHVFLLTTKVGGLGVNLTGADRVIIYDPDWNPSTDVQARERAWRLGQKRDV 855
Query: 1115 HIYRLISESTIEENILKKANQKRALDDLVIQSGGYNTEFFKKLDPMELFS-GHRTL-PMK 1172
IYRL++ TIEE I + K+ L + +++ + F+ D +LF+ G P +
Sbjct: 856 TIYRLMTAGTIEEKIYHRQIFKQFLTNKILKDPKQR-QTFQLSDLYDLFALGEEGQGPTE 914
Query: 1173 TMQKEKAINNGNEVSLSNADVEAALKCVEDEADYMALKRAEQEEA--VDNQEFTEEAVGR 1230
T K N D +A E +A Y AE+++ V E+ G
Sbjct: 915 T---SKLFKEAEVTYEENRDKDAPK---ERDASYQRDVEAEKQDISKVTGVAAIEQFQGE 968
Query: 1231 PE 1232
PE
Sbjct: 969 PE 970
Score = 297 (109.6 bits), Expect = 1.6e-69, Sum P(4) = 1.6e-69
Identities = 69/193 (35%), Positives = 102/193 (52%)
Query: 556 HVCITTYRLIIQDSKVFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPL 615
HV +TTY + + + +W ILDE H I+N + + RI+L+GTP+
Sbjct: 527 HVLVTTYSGLQSYASLLIPVEWGGTILDEGHKIRNPNTSITMHAKELRTPHRIILSGTPM 586
Query: 616 QNDLMELWSLMHFLMPHIFQSHQEFKDWFCNPI--SGMVEG---QEKVNKEVVDRLHNVL 670
QN+L ELWSL F+ P + F++ F PI G Q + + + L + +
Sbjct: 587 QNNLTELWSLFDFVFPMRLGTLVNFRNQFEFPIRQGGYANASNLQVQTAAKCAETLKDAI 646
Query: 671 RPFILRRLKRDVEKQLPMKQEHVIYCRLSKRQRNLYEDFIASSETQATLASANFFGMISV 730
P++L+R K DV LP K E V++CRL+K QR YE F+ S E Q+ L ++
Sbjct: 647 SPYLLQRFKIDVAADLPKKSEQVLFCRLTKPQRQAYEAFLGSEEMQSILRGRR--QVLYG 704
Query: 731 IMQLRKVCNHPDL 743
+ LRK+CNHPDL
Sbjct: 705 VDILRKICNHPDL 717
Score = 183 (69.5 bits), Expect = 1.6e-69, Sum P(4) = 1.6e-69
Identities = 33/78 (42%), Positives = 50/78 (64%)
Query: 455 LREYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTIAMLAHLACEKGIWGPHLIVVPTS 514
L +YQ G+ W+ ++++++ GI+ DEMGLGKTI IA LA L K + P ++V P +
Sbjct: 398 LFDYQKTGVQWMWELHQQQVGGIIGDEMGLGKTIQAIAFLAGLHYSKRLTKPIIVVCPAT 457
Query: 515 VMLNWETEFLKWCPAFKI 532
VM W EF +W P F++
Sbjct: 458 VMKQWVNEFHRWWPPFRV 475
Score = 56 (24.8 bits), Expect = 1.6e-09, Sum P(3) = 1.6e-09
Identities = 26/84 (30%), Positives = 38/84 (45%)
Query: 1151 TEFFKKLD---PMELFSGHRTLPMKTMQKEKAINNGNEVSLSNADVEAALKCVEDEADYM 1207
TE + D PM L G TL Q E I G + SN V+ A KC E D +
Sbjct: 591 TELWSLFDFVFPMRL--G--TLVNFRNQFEFPIRQGGYANASNLQVQTAAKCAETLKDAI 646
Query: 1208 A---LKRAEQEEAVDNQEFTEEAV 1228
+ L+R + + A D + +E+ +
Sbjct: 647 SPYLLQRFKIDVAADLPKKSEQVL 670
Score = 49 (22.3 bits), Expect = 1.6e-69, Sum P(4) = 1.6e-69
Identities = 28/92 (30%), Positives = 41/92 (44%)
Query: 49 VDVRKKKALDKQLEFL-L--GQTERYSSMLAENLVDSHKPVQQSPMREQPGIQYKEADEN 105
V +K K+ D+ +F L G + Y S L +N V S + + R QP +E D N
Sbjct: 302 VRAKKAKSSDEVEDFSGLDDGNEKLYQSRL-QNWV-SRRSAARKRAR-QP----RELDTN 354
Query: 106 GAEEPGVQSKEADEDDAEQHSGFEPQLDAADI 137
+ G EAD D+E F+P D+
Sbjct: 355 QVPDIG----EADFRDSEDEEWFKPHPTQPDL 382
Score = 43 (20.2 bits), Expect = 3.2e-08, Sum P(3) = 3.2e-08
Identities = 9/31 (29%), Positives = 18/31 (58%)
Query: 1722 SSRNGLYLGGSFFSSVTQTSCKSTREPARRV 1752
SSR + G+++S + + K+ R+ +RV
Sbjct: 492 SSREDALMYGTYWSGGSSSGLKAARKVVKRV 522
Score = 38 (18.4 bits), Expect = 2.0e-54, Sum P(4) = 2.0e-54
Identities = 10/23 (43%), Positives = 11/23 (47%)
Query: 196 GRESSAEMGEDEAEPTVVEEGHV 218
G SS + VVEEGHV
Sbjct: 506 GGSSSGLKAARKVVKRVVEEGHV 528
Score = 37 (18.1 bits), Expect = 1.9e-33, Sum P(4) = 1.9e-33
Identities = 10/22 (45%), Positives = 13/22 (59%)
Query: 1193 VEAALKCVEDEADYMALKRAEQ 1214
V A K +E EA +A + AEQ
Sbjct: 1014 VRADPKIIEAEAKRVAAEAAEQ 1035
>UNIPROTKB|E1BS48 [details] [associations]
symbol:CHD9 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271 Pfam:PF07533
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
SMART:SM00592 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
GeneTree:ENSGT00560000077077 OMA:MWGHQTA EMBL:AADN02038292
EMBL:AADN02038293 EMBL:AADN02038294 EMBL:AADN02038295
EMBL:AADN02038296 EMBL:AADN02038297 EMBL:AADN02038298
IPI:IPI00579055 Ensembl:ENSGALT00000005902 Uniprot:E1BS48
Length = 2614
Score = 466 (169.1 bits), Expect = 7.8e-69, Sum P(5) = 7.8e-69
Identities = 116/305 (38%), Positives = 168/305 (55%)
Query: 455 LREYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTIAMLAHLACEKGIWGPHLIVVPTS 514
LREYQ GL+WL+ + R N ILADEMGLGKTI +I L + GI GP LI+ P S
Sbjct: 857 LREYQLEGLNWLLFNWYNRRNCILADEMGLGKTIQSITFLYEILLS-GIRGPFLIIAPLS 915
Query: 515 VMLNWETEFLKWCPAFKILTYFGSAKERK--------FK-RQGWLKPNS--FHVCITTYR 563
+ NWE EF W ++ Y GS R+ F+ QG + + F ITT+
Sbjct: 916 TITNWEREFRTWTD-LNVVVYHGSMISRQMIQQYEMYFRDSQGRIVRGTYRFQAIITTFE 974
Query: 564 LIIQDSKVFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPLQNDLMELW 623
+I+ +W+ +I+DEAH +KN + + L N + ++LLTGTPLQN + EL+
Sbjct: 975 MILGGCPELNAIEWRCVIIDEAHRLKNRNCKLLEGLKLMNLEHKVLLTGTPLQNTVEELF 1034
Query: 624 SLMHFLMPHIFQSHQEFKDWFCNPISGMVEGQEKVNKEVVDRLHNVLRPFILRRLKRDVE 683
SL+HFL P F + F F G ++ +E+V K L +L+P +LRRLK DVE
Sbjct: 1035 SLLHFLEPLRFPAESTFMQEF-----GDLKTEEQVQK-----LQAILKPMMLRRLKEDVE 1084
Query: 684 KQLPMKQEHVIYCRLSKRQRNLYEDFIASSETQATLAS--ANFFGMISVIMQLRKVCNHP 741
K+L K+E +I L+ Q+ Y + + + + AN +++ +M+LRK CNHP
Sbjct: 1085 KKLAPKEETIIEVELTNIQKKYYRAILEKNFAFLSKGAGQANVPNLVNTMMELRKCCNHP 1144
Query: 742 DLFEG 746
L +G
Sbjct: 1145 YLIKG 1149
Score = 360 (131.8 bits), Expect = 7.8e-69, Sum P(5) = 7.8e-69
Identities = 75/159 (47%), Positives = 105/159 (66%)
Query: 990 LIQFDCGKLQELAILLRKLKSDGHRALIFTQMTKMLDILEEFISLYGYTYMRLDGSTQPE 1049
+IQ GKL + LL K+K+ GH+ LIF+QM + LDILE+++ Y Y R+DG +
Sbjct: 1174 MIQ-SAGKLVLIDKLLPKMKAGGHKVLIFSQMVRCLDILEDYLIHKRYLYERIDGRVRGN 1232
Query: 1050 ERQTLMQRFNT-NPKIFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMD-QQAQDRCHR 1107
RQ + RF+ + F+F+L TR+GG+GINL ADT I +DSDWNP D Q+AQ RCHR
Sbjct: 1233 LRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQKAQARCHR 1292
Query: 1108 IGQTREVHIYRLISESTIEENILKKANQKRALDDLVIQS 1146
IGQ + V +YRLI+ ++ E + +A+ K LD V+QS
Sbjct: 1293 IGQNKAVKVYRLITRNSYEREMFDRASLKLGLDKAVLQS 1331
Score = 57 (25.1 bits), Expect = 7.8e-69, Sum P(5) = 7.8e-69
Identities = 37/166 (22%), Positives = 68/166 (40%)
Query: 1768 LHDAN-SRQQDDKVSNFDRREDGPVIEQLDLTLEFQRELVDSTISFPPRVNLSVYGSDLE 1826
L DA + +D KV + +R+ED E+ ++ E + + V + P+ V ++ +
Sbjct: 2032 LPDAKVNTPEDTKVKSENRKEDAQSSEEESMSTE-ETQTVMKSEPLSPKNGAPVQNTEHK 2090
Query: 1827 TSVN-KSTRENHHLKDSQVAENRFRDAARACIEDSLGWASSAFPANDAKLRSVPKSQSLG 1885
SV ++ R + + N R G SS+ +D+ RS S+S
Sbjct: 2091 PSVKIEADRRMVAARTEPLTPNPASKKQRV---SKRGSDSSSDSDSDSD-RSSCSSRSSS 2146
Query: 1886 KHKLSLSDSVKCPKSKLRKTSMEHSEIQHSSPEPVSNQSVATKDAN 1931
S S S C S+ +S S +S S+ S ++ ++
Sbjct: 2147 S---SSSSSSSCSHSRSGSSSSSSSSCSSASSSSSSSSSSSSSSSS 2189
Score = 55 (24.4 bits), Expect = 1.3e-68, Sum P(5) = 1.3e-68
Identities = 34/147 (23%), Positives = 63/147 (42%)
Query: 1840 KDSQV-AENRFRDAARACIEDSLGWASSAFPANDAKLRSVPKSQSLG-KHKLSLSDSVKC 1897
+D++V +ENR DA ++ E+S+ + + ++V KS+ L K+ + ++
Sbjct: 2041 EDTKVKSENRKEDA-QSSEEESM---------STEETQTVMKSEPLSPKNGAPVQNTEHK 2090
Query: 1898 PKSKLRKTS-MEHSEIQHSSPEPVSNQSVATKDANLRFDLIQEAWLEDMDGGRLSCMDQD 1956
P K+ M + + +P P S + +K + D ++ D D R SC +
Sbjct: 2091 PSVKIEADRRMVAARTEPLTPNPASKKQRVSKRGS---DSSSDS---DSDSDRSSCSSRS 2144
Query: 1957 LSLETVLSSEIPHNYFPDVISGLDDCS 1983
S + SS H+ S CS
Sbjct: 2145 SSSSSSSSSSCSHSRSGSSSSSSSSCS 2171
Score = 48 (22.0 bits), Expect = 7.8e-69, Sum P(5) = 7.8e-69
Identities = 17/67 (25%), Positives = 27/67 (40%)
Query: 217 HVQGNGNDLLAGSKLDTSGSLVRRCDEINGGLSISENHLLDIETSQVRDTSKKSGASTQK 276
H GN G + V + + S S NH+ TS ++ T+ S +S Q
Sbjct: 239 HFCGNQEGTFGGQSPTITPCSVNNSQQFSSPYSYSNNHISP--TSLLQSTTALS-SSQQT 295
Query: 277 QALYDFS 283
+ DF+
Sbjct: 296 HPISDFT 302
Score = 45 (20.9 bits), Expect = 2.4e-37, Sum P(4) = 2.4e-37
Identities = 13/43 (30%), Positives = 21/43 (48%)
Query: 952 SVFLQPTYKEKCSEVLS--PLLFPIRPAIVRRQVYFPDRRLIQ 992
++F+QP +E+ S L LL +R +R F +L Q
Sbjct: 1908 NIFIQPITEERASRTLYRIELLRKVREQALRHPQLFERLKLCQ 1950
Score = 41 (19.5 bits), Expect = 3.6e-67, Sum P(5) = 3.6e-67
Identities = 20/85 (23%), Positives = 34/85 (40%)
Query: 1713 RMGCRQNFSSSRNGLYLGGSFFSSVTQTSCKSTREPARRVKFTNLGQSSKLLSAALHDAN 1772
R C SSS + S S + +S S+ A ++ SS S++ ++
Sbjct: 2137 RSSCSSRSSSSSSSSSSSCSHSRSGSSSSSSSSCSSA-----SSSSSSSSSSSSSSSSSS 2191
Query: 1773 SRQQDDKVSNFDRREDG-PVIEQLD 1796
S + D +R +G P I+ D
Sbjct: 2192 SEESDSDEEEAQKRAEGTPHIKAYD 2216
Score = 40 (19.1 bits), Expect = 7.8e-69, Sum P(5) = 7.8e-69
Identities = 13/39 (33%), Positives = 19/39 (48%)
Query: 1591 DVWLPQEDAILCAVVHEYGPNWSLVSD--ILYGMTASGY 1627
DVW+P+ D V E+ W +D +L G+ GY
Sbjct: 1657 DVWVPEPDH--SEVPAEW---WDAEADKSLLIGVFKHGY 1690
Score = 39 (18.8 bits), Expect = 3.8e-68, Sum P(4) = 3.8e-68
Identities = 7/18 (38%), Positives = 13/18 (72%)
Query: 1518 DSDSKLSRKRHDGSTELK 1535
DSD + ++KR +G+ +K
Sbjct: 2196 DSDEEEAQKRAEGTPHIK 2213
Score = 39 (18.8 bits), Expect = 5.9e-67, Sum P(5) = 5.9e-67
Identities = 19/84 (22%), Positives = 33/84 (39%)
Query: 1711 KSRMGCRQNFSSSRNGLYLGGSFFSSVTQTSCKSTREPARRVKFTNLGQSSKLLSAALHD 1770
K R+ R + SSS + S SS + +S S+ + + SS S+A
Sbjct: 2117 KQRVSKRGSDSSSDSDSDSDRSSCSSRSSSSSSSSSSSCSHSRSGSSSSSSSSCSSASSS 2176
Query: 1771 ANSRQQDDKVSNFDRREDGPVIEQ 1794
++S S+ E+ E+
Sbjct: 2177 SSSSSSSSSSSSSSSSEESDSDEE 2200
Score = 37 (18.1 bits), Expect = 1.1e-67, Sum P(5) = 1.1e-67
Identities = 24/95 (25%), Positives = 38/95 (40%)
Query: 243 EINGGLS--ISENH---LLDIETSQVRDTSKKSGASTQKQALYDFSDEQEDGDFVVATGX 297
E+N S +S NH + + TSQ + S + + T +L+ F QE G F +
Sbjct: 198 EVNVSTSHRVSVNHPPPVSNPSTSQ-QPLSVQPFSQTASASLH-FCGNQE-GTFGGQSPT 254
Query: 298 XXXXXXXXXXXXXXXXXDSNNYIDEIALLQKESEI 332
SNN+I +LLQ + +
Sbjct: 255 ITPCSVNNSQQFSSPYSYSNNHISPTSLLQSTTAL 289
>ZFIN|ZDB-GENE-030131-497 [details] [associations]
symbol:chd9 "chromodomain helicase DNA binding
protein 9" species:7955 "Danio rerio" [GO:0016817 "hydrolase
activity, acting on acid anhydrides" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271
Pfam:PF07533 PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298
SMART:SM00490 SMART:SM00592 Pfam:PF00385 ZFIN:ZDB-GENE-030131-497
GO:GO:0005524 GO:GO:0005634 GO:GO:0003677 GO:GO:0004386
InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR023780 GeneTree:ENSGT00560000077077
EMBL:CR318585 EMBL:CU464124 EMBL:FP015866 IPI:IPI00972236
Ensembl:ENSDART00000027807 Bgee:E7F7W5 Uniprot:E7F7W5
Length = 2948
Score = 452 (164.2 bits), Expect = 2.3e-68, Sum P(4) = 2.3e-68
Identities = 112/305 (36%), Positives = 163/305 (53%)
Query: 455 LREYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTIAMLAHLACEKGIWGPHLIVVPTS 514
LR+YQ G++WL+ + R N ILADEMGLGKTI +I L + GI GP LI+ P S
Sbjct: 913 LRDYQLEGVNWLLFNWYNRRNCILADEMGLGKTIQSITFLEEIY-RTGIKGPFLIIAPLS 971
Query: 515 VMLNWETEFLKWCPAFKILTYFGSAKERKFKRQG--WLKPNS---------FHVCITTYR 563
+ NWE EF W ++ Y GS R+ +Q + + + F ITT+
Sbjct: 972 TIANWEREFRTWTH-LNVIVYHGSVVSRQMLQQYEMYCRDSQGRVIRGAYRFQAVITTFE 1030
Query: 564 LIIQDSKVFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPLQNDLMELW 623
+I+ W+ +I+DEAH +KN + + + + ++LLTGTPLQN + EL+
Sbjct: 1031 MILGGCPELNAIDWRCVIIDEAHRLKNKNCKLLEGFKLMSLEHKVLLTGTPLQNTVEELF 1090
Query: 624 SLMHFLMPHIFQSHQEFKDWFCNPISGMVEGQEKVNKEVVDRLHNVLRPFILRRLKRDVE 683
SL+HFL P F S F F G ++ +E+V K L +L+P +LRRLK DVE
Sbjct: 1091 SLLHFLEPTRFPSENTFMQEF-----GDLKTEEQVQK-----LQAILKPMMLRRLKEDVE 1140
Query: 684 KQLPMKQEHVIYCRLSKRQRNLYEDFIAS--SETQATLASANFFGMISVIMQLRKVCNHP 741
K+L K+E +I L+ Q+ Y + S AN +++ +M+LRK CNHP
Sbjct: 1141 KKLAPKEETIIEVELTNIQKKYYRAILEKNFSFLAKGAGQANVPNLLNTMMELRKCCNHP 1200
Query: 742 DLFEG 746
L +G
Sbjct: 1201 YLIKG 1205
Score = 368 (134.6 bits), Expect = 2.3e-68, Sum P(4) = 2.3e-68
Identities = 77/165 (46%), Positives = 107/165 (64%)
Query: 983 VYFPDRRLIQFDCGKLQELAILLRKLKSDGHRALIFTQMTKMLDILEEFISLYGYTYMRL 1042
V F + +IQ GKL + LL K+K+ GH+ LIF+QM + LDILE+++ Y Y R+
Sbjct: 1223 VDFHLQAMIQ-SAGKLVLIDKLLPKMKAGGHKVLIFSQMVRCLDILEDYLIQRRYLYERI 1281
Query: 1043 DGSTQPEERQTLMQRFNT-NPKIFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQA 1101
DG + RQ + RF+ + F+F+L TR+GG+GINL ADT I +DSDWNP D QA
Sbjct: 1282 DGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQA 1341
Query: 1102 QDRCHRIGQTREVHIYRLISESTIEENILKKANQKRALDDLVIQS 1146
Q RCHRIGQ + V +YRLI+ ++ E + +A+ K LD V+QS
Sbjct: 1342 QARCHRIGQNKAVKVYRLITRNSYEREMFDRASLKLGLDKAVLQS 1386
Score = 57 (25.1 bits), Expect = 2.3e-68, Sum P(4) = 2.3e-68
Identities = 24/88 (27%), Positives = 36/88 (40%)
Query: 1840 KDSQVAENRFRDAARACIEDSLGWASSAFPANDAKLRSVPKSQSLGKH-KLSLSDSVKCP 1898
K ++++ R+A R DS SS+ ++ + RS S S + S S S C
Sbjct: 2186 KQKKLSKRSRREARRESRSDSDSDGSSSSSSSSSSSRSSSSSSSSSRSGSSSSSSSSSCS 2245
Query: 1899 KSKLRKTSMEHSEIQHS-SPEPVSNQSV 1925
+S S + S S E N SV
Sbjct: 2246 SGSSSSSSSSSSSSEGSDSEEAPKNASV 2273
Score = 49 (22.3 bits), Expect = 1.6e-67, Sum P(4) = 1.6e-67
Identities = 19/90 (21%), Positives = 36/90 (40%)
Query: 1467 DATFSDAMSPPSTSQKKRKKAELALYDD--EER-EXXXXXXXXXXXXXXPVRSPDSDSKL 1523
+A + ++P S ++K++K ++ + + E R + RS S S
Sbjct: 2171 EAARTKPLTPNSITRKQKKLSKRSRREARRESRSDSDSDGSSSSSSSSSSSRSSSSSSSS 2230
Query: 1524 SRKRHDGSTELKTCESIFIDLEQKSASRSK 1553
SR S+ +C S S+S S+
Sbjct: 2231 SRSGSSSSSSSSSCSSGSSSSSSSSSSSSE 2260
Score = 41 (19.5 bits), Expect = 2.3e-68, Sum P(4) = 2.3e-68
Identities = 10/37 (27%), Positives = 20/37 (54%)
Query: 53 KKKALDKQLEFLLGQTERYSSMLAENLVDSHKPVQQS 89
K+KA ++ G+ +R + +E L D +P ++S
Sbjct: 645 KQKAQIGKIVIKFGKKKRKKTDSSEELSDDDRPTRRS 681
Score = 41 (19.5 bits), Expect = 2.1e-33, Sum P(5) = 2.1e-33
Identities = 11/33 (33%), Positives = 14/33 (42%)
Query: 1580 NVWSRD-CVPSPDVWLPQEDAILCAVVHEYGPN 1611
N+ + D C+ W PQ D A H G N
Sbjct: 1319 NLTAADTCIIFDSDWNPQNDLQAQARCHRIGQN 1351
Score = 41 (19.5 bits), Expect = 9.1e-27, Sum P(3) = 9.1e-27
Identities = 11/36 (30%), Positives = 20/36 (55%)
Query: 605 KRRILLTGTPLQNDL-MELWSLMHFLMPHIFQSHQE 639
+R+ L P+ N L + + H +PHI +++QE
Sbjct: 177 QRQHSLNQHPVTNQLQLRHQQIAHQGLPHIGKNYQE 212
Score = 40 (19.1 bits), Expect = 1.4e-66, Sum P(4) = 1.4e-66
Identities = 6/20 (30%), Positives = 14/20 (70%)
Query: 1905 TSMEHSEIQHSSPEPVSNQS 1924
T ++H +++ +S P+ NQ+
Sbjct: 2101 TPLQHIQMKEASASPLLNQT 2120
Score = 39 (18.8 bits), Expect = 2.1e-33, Sum P(5) = 2.1e-33
Identities = 7/14 (50%), Positives = 10/14 (71%)
Query: 892 DILQQKTVRRSYLY 905
DIL+ ++R YLY
Sbjct: 1265 DILEDYLIQRRYLY 1278
Score = 38 (18.4 bits), Expect = 4.8e-68, Sum P(4) = 4.8e-68
Identities = 24/136 (17%), Positives = 42/136 (30%)
Query: 196 GRESSAEMGEDEAEPTVVEEGHVQGN----GNDLLAGSKLDTSGSLVRRCDEINGGLSIS 251
G +S + PTV GH Q + + S T +R G +
Sbjct: 230 GHHNSLSVEGSSFHPTVAPGGHSQSKQYIESSMMPMASHQHTGFQATQRVQGFTTGPRME 289
Query: 252 ENHL-LDIETSQVRD---TSKKSGASTQKQALYDFSDEQEDGDFVVATGXXXXXXXXXXX 307
+N L +++ T + AS+ A Y + + V AT
Sbjct: 290 DNGLTFPVQSPSATSSFQTDSVTHASSYSTACYALTSQPPP--IVNATQSYSSALVSRTT 347
Query: 308 XXXXXXXDSNNYIDEI 323
++N +D +
Sbjct: 348 SSTTISSSASNLLDTV 363
>ASPGD|ASPL0000018137 [details] [associations]
symbol:AN4187 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005576
"extracellular region" evidence=IDA] InterPro:IPR000330
InterPro:IPR001650 InterPro:IPR016024 Pfam:PF00176 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0003677 EMBL:BN001302
GO:GO:0004386 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 HOGENOM:HOG000210415 KO:K15192 OMA:TKQEGAI
InterPro:IPR022707 Pfam:PF12054 EMBL:AACD01000068 OrthoDB:EOG44XNQZ
RefSeq:XP_661791.1 ProteinModelPortal:Q5B5J3 STRING:Q5B5J3
EnsemblFungi:CADANIAT00004481 GeneID:2873610 KEGG:ani:AN4187.2
Uniprot:Q5B5J3
Length = 1904
Score = 461 (167.3 bits), Expect = 3.4e-68, Sum P(2) = 3.4e-68
Identities = 110/318 (34%), Positives = 165/318 (51%)
Query: 446 KFPFLLKFPLREYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTIAMLA---HLACE-- 500
K P +K LR YQ G++WL + L+GIL D+MGLGKT+ TI ++A H+ E
Sbjct: 1309 KLPVAIKAELRPYQQEGVNWLAFLNRYNLHGILCDDMGLGKTLQTICIVASDHHMRAEDF 1368
Query: 501 ------KGIWGPHLIVVPTSVMLNWETEFLKWCPAFKILTYFGSAKERKFKRQGWLKPNS 554
+ P LI+ P S+ +W+ E ++ P + Y G ER K QG L
Sbjct: 1369 AKTQRPESRKVPSLIICPPSLSGHWQQEVKQYAPFLNCVAYVGPPAERS-KLQGSLADAD 1427
Query: 555 FHVCITTYRLIIQDSKVFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTP 614
+ +T+Y + D+ V + W Y +LDE HLIKN K++ + NS R++L+GTP
Sbjct: 1428 --IVVTSYDICRNDNDVLRPISWNYCVLDEGHLIKNPKAKVTMAVKRINSNHRLILSGTP 1485
Query: 615 LQNDLMELWSLMHFLMPHIFQSHQEFKDWFCNPISGMVEGQEKVNKEV----VDRLHNVL 670
+QN+++ELWSL FLMP + + F D F PI+ + +E ++ LH +
Sbjct: 1486 IQNNVLELWSLFDFLMPGFLGTEKVFLDRFAKPIATSRFSKSSKEQEAGALAIEALHKQV 1545
Query: 671 RPFILRRLKRDVEKQLPMKQEHVIYCRLSKRQRNLYEDFI-----ASSETQATLASANFF 725
PF+LRRLK +V LP K YC S+ Q+ L+EDF A E + A+
Sbjct: 1546 LPFLLRRLKEEVLNDLPPKIIQNYYCDPSELQKKLFEDFTKKEQKALQEKMGSSEKADKE 1605
Query: 726 GMISVIMQLRKVCNHPDL 743
+ + +R++CN P L
Sbjct: 1606 HIFQALQYMRRLCNSPAL 1623
Score = 337 (123.7 bits), Expect = 3.4e-68, Sum P(2) = 3.4e-68
Identities = 79/191 (41%), Positives = 115/191 (60%)
Query: 1013 HRALIFTQMTKMLDILE-EFIS--LYGYTYMRLDGSTQPEERQTLMQRFNTNPKIFLFIL 1069
HRAL+F QM +MLDI++ E + L ++RLDG+ + RQ ++ RFN++P + +L
Sbjct: 1686 HRALVFCQMKEMLDIVQSEVLQKLLPSVQFLRLDGAVEATRRQDIVNRFNSDPSYDVLLL 1745
Query: 1070 STRSGGVGINLVGADTVIFYDSDWNPAMDQQAQDRCHRIGQTREVHIYRLISESTIEENI 1129
+T GG+G+NL GADTVIF + DWNP D QA DR HRIGQ + V++YRLI+ T+EE I
Sbjct: 1746 TTSVGGLGLNLTGADTVIFVEHDWNPQKDIQAMDRAHRIGQKKVVNVYRLITRGTLEEKI 1805
Query: 1130 LKKANQKRALDDLVI--QSGGYNTEFFKKLDPMELFSGHRTLPMKTMQKEKAINNGNEVS 1187
L K + V+ Q+ G NT +L ++LF+ T + +K I G EV
Sbjct: 1806 LNLQRFKIDVASTVVNQQNAGLNTMDTDQL--LDLFNLGETA--ENAEKPTEIG-GKEVD 1860
Query: 1188 LSNADVEAALK 1198
+ D++ LK
Sbjct: 1861 M--VDIDGELK 1869
Score = 40 (19.1 bits), Expect = 3.1e-22, Sum P(3) = 3.1e-22
Identities = 11/30 (36%), Positives = 17/30 (56%)
Query: 632 HIFQSHQEFKDWFCN-PISGMVEGQEKVNK 660
HIFQ+ Q + CN P + EG ++ N+
Sbjct: 1606 HIFQALQYMRR-LCNSPALVVKEGHKQYNE 1634
Score = 39 (18.8 bits), Expect = 1.2e-23, Sum P(2) = 1.2e-23
Identities = 9/27 (33%), Positives = 15/27 (55%)
Query: 777 TADLKGLGLLFTNLD-FSMNSWESDEL 802
TA K +GL+ N D F N + +++
Sbjct: 59 TAAAKAIGLIVANADTFDPNQDDGEDV 85
Score = 39 (18.8 bits), Expect = 3.1e-22, Sum P(3) = 3.1e-22
Identities = 8/17 (47%), Positives = 10/17 (58%)
Query: 562 YRLIIQDSKVFKRKKWK 578
YRLI+Q F R W+
Sbjct: 442 YRLIMQTDLDFDRPVWE 458
>UNIPROTKB|F1NP27 [details] [associations]
symbol:CHD1 "Chromodomain-helicase-DNA-binding protein 1"
species:9031 "Gallus gallus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013
PROSITE:PS51194 SMART:SM00298 SMART:SM00490 Pfam:PF00385
GO:GO:0005524 GO:GO:0005634 GO:GO:0003677 GO:GO:0004386
InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR023780 InterPro:IPR023779
PROSITE:PS00598 InterPro:IPR025260 Pfam:PF13907
GeneTree:ENSGT00560000076896 EMBL:AADN02065411 EMBL:AADN02065412
EMBL:AADN02065413 IPI:IPI00591777 Ensembl:ENSGALT00000024661
ArrayExpress:F1NP27 Uniprot:F1NP27
Length = 1803
Score = 425 (154.7 bits), Expect = 3.5e-68, Sum P(6) = 3.5e-68
Identities = 102/292 (34%), Positives = 157/292 (53%)
Query: 455 LREYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTIAMLAHLACEKGIWGPHLIVVPTS 514
LR+YQ GL WL + K + ILADEMGLGKTI TI+ L +L E ++GP L+VVP S
Sbjct: 478 LRDYQLNGL-WLAHSWCKGNSCILADEMGLGKTIQTISFLNYLFHEHQLYGPFLLVVPLS 536
Query: 515 VMLNWETEFLKWCPAFKILTYFGSAKERKFKR-QGWLKPNS----FHVCITTYRLIIQDS 569
+ +W+ E W P + Y G R R W+ P + F++ +TTY ++++D
Sbjct: 537 TLTSWQREIQTWAPQMNAVVYLGDITSRNMIRTHEWMHPQTKRLKFNILLTTYEILLKDK 596
Query: 570 KVFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPLQNDLMELWSLMHFL 629
W ++ +DEAH +KN S ++TL++ + I P ELWSL HF+
Sbjct: 597 SFLGGLNWAFIGVDEAHRLKNDDSLLYKTLIDLVT---IDSDTAPSCTIPQELWSL-HFI 652
Query: 630 MPHIFQSHQEFKDWFCNPISGMVEGQEKVNKEVVDRLHNVLRPFILRRLKRDVEKQLPMK 689
MP F S ++F++ G G ++KE L PF+LRR+K+DVEK LP K
Sbjct: 653 MPEKFSSWEDFEE---EHGKGREYGYASLHKE--------LEPFLLRRVKKDVEKSLPAK 701
Query: 690 QEHVIYCRLSKRQRNLYEDFIASSETQATLAS-ANFFGMISVIMQLRKVCNH 740
E ++ +S Q+ Y+ + + + S + G ++++M+L+K CNH
Sbjct: 702 VEQILRMEMSALQKQYYKWILTRNYKALSKGSKGSTSGFLNIMMELKKCCNH 753
Score = 391 (142.7 bits), Expect = 3.5e-68, Sum P(6) = 3.5e-68
Identities = 78/151 (51%), Positives = 108/151 (71%)
Query: 996 GKLQELAILLRKLKSDGHRALIFTQMTKMLDILEEFISLYGYTYMRLDGSTQPEERQTLM 1055
GKL L LL +L+ G+R LIF+QM +MLDIL E++ + + RLDGS + E R+ +
Sbjct: 780 GKLILLDKLLIRLRERGNRVLIFSQMVRMLDILAEYLKYRQFPFQRLDGSIKGELRKQAL 839
Query: 1056 QRFNTN-PKIFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQDRCHRIGQTREV 1114
FN + F F+LSTR+GG+GINL ADTV+ +DSDWNP D QAQ R HRIGQ ++V
Sbjct: 840 DHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQV 899
Query: 1115 HIYRLISESTIEENILKKANQKRALDDLVIQ 1145
+IYRL+++ ++EE+IL++A +K LD LVIQ
Sbjct: 900 NIYRLVTKGSVEEDILERAKKKMVLDHLVIQ 930
Score = 56 (24.8 bits), Expect = 3.5e-68, Sum P(6) = 3.5e-68
Identities = 24/100 (24%), Positives = 41/100 (41%)
Query: 191 AVDKVGRESSAEMGEDEAEPTVVEEGHVQGNGNDLLAGSKLDTSGSLVRRCDEINGGLSI 250
+ D E+ + +DE + + G V G G+D S+ + G C+E
Sbjct: 129 SADDSSSETKKKKHKDE-DWQMSGSGSVSGTGSD----SESEEDGDK-SSCEESESDYEP 182
Query: 251 SENHLLDIETSQVRDTSKKSGASTQKQALYDFSDEQEDGD 290
S+++ S K +K+ L D S+E+ED D
Sbjct: 183 KNKVKSRKPPSRIKPKSGKKSTGQKKRQL-DSSEEEEDDD 221
Score = 49 (22.3 bits), Expect = 1.1e-67, Sum P(5) = 1.1e-67
Identities = 17/65 (26%), Positives = 29/65 (44%)
Query: 198 ESSAEMGEDEAEPTVVEEGHVQGNGNDLLAGSKLDTSGSLVRRCDEINGGLSISENHLLD 257
E S E+ + + G G+G+ +GS D S S D +G S S++ +
Sbjct: 7 EESVRNSSGESSRSDDDSGSASGSGSGSSSGSSSDGSSSQSGSSDSESGSESGSQSES-E 65
Query: 258 IETSQ 262
+TS+
Sbjct: 66 SDTSR 70
Score = 47 (21.6 bits), Expect = 3.5e-68, Sum P(6) = 3.5e-68
Identities = 12/54 (22%), Positives = 27/54 (50%)
Query: 1564 PVKRVLMIKPEKLKKGNVWSRDCVPSPDV-WLPQEDAILCAVVHEYG-PNWSLV 1615
P+ + + PE+ K+ + D+ W ++D+ L ++EYG +W ++
Sbjct: 1215 PLHKSIPSDPEERKRYVIPCHTKAAHFDIDWGKEDDSNLLVGIYEYGYGSWEMI 1268
Score = 46 (21.3 bits), Expect = 2.3e-67, Sum P(5) = 2.3e-67
Identities = 18/57 (31%), Positives = 25/57 (43%)
Query: 69 ERYSSMLAENLVDSHKPVQQSPMREQPGIQYKEADENGAEEPGVQSKEADEDDAEQH 125
E S +N V S KP P R +P K G ++ + S E +EDD E +
Sbjct: 175 ESESDYEPKNKVKSRKP----PSRIKPKSGKKST---GQKKRQLDSSEEEEDDDEDY 224
Score = 45 (20.9 bits), Expect = 3.5e-68, Sum P(6) = 3.5e-68
Identities = 11/40 (27%), Positives = 24/40 (60%)
Query: 86 VQQSPMREQPGIQYKEAD-ENGAEEPGVQSKEADEDDAEQ 124
VQ+S + ++ Q K A ++G+EE S+++ +D + +
Sbjct: 97 VQRSAVLKKQQQQQKAASSDSGSEEDSSSSEDSADDSSSE 136
Score = 39 (18.8 bits), Expect = 3.5e-68, Sum P(6) = 3.5e-68
Identities = 10/42 (23%), Positives = 19/42 (45%)
Query: 1743 KSTREPARRVKFTNLGQSSKLLSAALHDANSRQQDDKVSNFD 1784
+ TR ++K + + + K S+ S + DD+ N D
Sbjct: 1326 RKTRNKKNKMKASKIKEEIKSDSSPQPSEKSDEDDDEEDNKD 1367
Score = 38 (18.4 bits), Expect = 4.4e-68, Sum P(5) = 4.4e-68
Identities = 10/41 (24%), Positives = 19/41 (46%)
Query: 1309 NQLRPIDRYAIRFLELWDPIIDKTAVESEVKFEEREWELDR 1349
N+++ ++ + + L D + TA V E ELD+
Sbjct: 1456 NEIKSENKEKSKKIPLLDTPVHITATSEPVPISEESEELDQ 1496
>UNIPROTKB|F1NLW6 [details] [associations]
symbol:CHD6 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271 Pfam:PF07533
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
SMART:SM00592 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
GeneTree:ENSGT00560000077077 EMBL:AADN02019534 EMBL:AADN02019532
EMBL:AADN02019533 IPI:IPI00572954 Ensembl:ENSGALT00000002030
ArrayExpress:F1NLW6 Uniprot:F1NLW6
Length = 2005
Score = 473 (171.6 bits), Expect = 5.6e-68, Sum P(5) = 5.6e-68
Identities = 117/305 (38%), Positives = 169/305 (55%)
Query: 455 LREYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTIAMLAHLACEKGIWGPHLIVVPTS 514
LREYQ G++WL+ + R N ILADEMGLGKTI +I L+ + GI GP LI+ P S
Sbjct: 258 LREYQLEGMNWLLFNWYNRKNCILADEMGLGKTIQSITFLSEIFL-MGIHGPFLIIAPLS 316
Query: 515 VMLNWETEFLKWCPAFKILTYFGSAKERKFKRQ---------GWLKPN--SFHVCITTYR 563
+ NWE EF W + Y GS R+ +Q G P F V ITT+
Sbjct: 317 TITNWEREFRTWTE-MNAIVYHGSQISRQMIQQYEMVYRDTQGNPLPGIFKFQVVITTFE 375
Query: 564 LIIQDSKVFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPLQNDLMELW 623
+I+ D K+ +W+ +++DEAH +KN + + L + ++LLTGTPLQN + EL+
Sbjct: 376 MILADCPELKKIQWRCVVIDEAHRLKNRNCKLLEGLKLMALEHKVLLTGTPLQNSVEELF 435
Query: 624 SLMHFLMPHIFQSHQEFKDWFCNPISGMVEGQEKVNKEVVDRLHNVLRPFILRRLKRDVE 683
SL++FL P F S F + F G ++ +E+V K L ++L+P +LRRLK DVE
Sbjct: 436 SLLNFLEPQQFPSETAFLEEF-----GDLKTEEQVKK-----LQSILKPMMLRRLKDDVE 485
Query: 684 KQLPMKQEHVIYCRLSKRQRNLYEDFIASSETQATLASA--NFFGMISVIMQLRKVCNHP 741
K L KQE +I L+ Q+ Y + + + + + N +I+ +M+LRK CNHP
Sbjct: 486 KNLAPKQETIIEVELTNIQKKYYRAILEKNFSFLSKGANQHNMPNLINTMMELRKCCNHP 545
Query: 742 DLFEG 746
L G
Sbjct: 546 YLING 550
Score = 368 (134.6 bits), Expect = 5.6e-68, Sum P(5) = 5.6e-68
Identities = 83/183 (45%), Positives = 114/183 (62%)
Query: 985 FPDRRLIQFDCGKLQELAILLRKLKSDGHRALIFTQMTKMLDILEEFISLYGYTYMRLDG 1044
F + +IQ GKL + LL KL + GH+ LIF+QM + LDILE+++ YTY R+DG
Sbjct: 570 FQLQAMIQA-AGKLVLIDKLLPKLIAGGHKVLIFSQMVRCLDILEDYLIQRRYTYERIDG 628
Query: 1045 STQPEERQTLMQRF-NTNPKIFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQD 1103
+ RQ + RF + F+F+L TR+GG+GINL ADT I +DSDWNP D QAQ
Sbjct: 629 RVRGNLRQAAIDRFCKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQA 688
Query: 1104 RCHRIGQTREVHIYRLISESTIEENILKKANQKRALDDLVIQS----GGYNTEFFKKLDP 1159
RCHRIGQ++ V +YRLI+ ++ E + KA+ K LD V+Q GG N ++L
Sbjct: 689 RCHRIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQDINRKGGTNG--VQQLSK 746
Query: 1160 MEL 1162
ME+
Sbjct: 747 MEV 749
Score = 39 (18.8 bits), Expect = 5.6e-68, Sum P(5) = 5.6e-68
Identities = 5/14 (35%), Positives = 9/14 (64%)
Query: 1581 VWSRDCVPSPDVWL 1594
+W D P PD+++
Sbjct: 1307 LWKEDGPPDPDIYV 1320
Score = 38 (18.4 bits), Expect = 5.6e-68, Sum P(5) = 5.6e-68
Identities = 12/43 (27%), Positives = 20/43 (46%)
Query: 1799 LEFQRELVDSTISFPPRVNLSVYGSDLETSVNKSTRENHHLKD 1841
L++ R+ D T+ P +G+D ET +K + KD
Sbjct: 1896 LDWLRQQSDYTLDVPG------FGTDPETHRDKPKQRRQRCKD 1932
Score = 37 (18.1 bits), Expect = 5.6e-68, Sum P(5) = 5.6e-68
Identities = 11/55 (20%), Positives = 26/55 (47%)
Query: 25 NISKDVKKFWMKIEKLVLYKHQMEVDVRKKKALDKQLEFLLGQTERYSSMLAENL 79
++ + + W K+EK YK+ ++ ++ L+ L R + +LA+ +
Sbjct: 234 HMERPASESWQKLEKSREYKNSNQL---REYQLEGMNWLLFNWYNRKNCILADEM 285
Score = 37 (18.1 bits), Expect = 5.7e-34, Sum P(5) = 5.7e-34
Identities = 9/28 (32%), Positives = 15/28 (53%)
Query: 1039 YMRLDGSTQPEERQTLMQRFNTNPKIFL 1066
+ LD + +ER T +RFN + +L
Sbjct: 865 FSELDSDS--DERPTRSRRFNEKTRRYL 890
>UNIPROTKB|F1NLV5 [details] [associations]
symbol:CHD6 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271 Pfam:PF07533
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
SMART:SM00592 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
OMA:CKWATME GeneTree:ENSGT00560000077077 EMBL:AADN02019534
EMBL:AADN02019532 EMBL:AADN02019533 IPI:IPI00588365
Ensembl:ENSGALT00000002034 ArrayExpress:F1NLV5 Uniprot:F1NLV5
Length = 2007
Score = 473 (171.6 bits), Expect = 5.6e-68, Sum P(5) = 5.6e-68
Identities = 117/305 (38%), Positives = 169/305 (55%)
Query: 455 LREYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTIAMLAHLACEKGIWGPHLIVVPTS 514
LREYQ G++WL+ + R N ILADEMGLGKTI +I L+ + GI GP LI+ P S
Sbjct: 258 LREYQLEGMNWLLFNWYNRKNCILADEMGLGKTIQSITFLSEIFL-MGIHGPFLIIAPLS 316
Query: 515 VMLNWETEFLKWCPAFKILTYFGSAKERKFKRQ---------GWLKPN--SFHVCITTYR 563
+ NWE EF W + Y GS R+ +Q G P F V ITT+
Sbjct: 317 TITNWEREFRTWTE-MNAIVYHGSQISRQMIQQYEMVYRDTQGNPLPGIFKFQVVITTFE 375
Query: 564 LIIQDSKVFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPLQNDLMELW 623
+I+ D K+ +W+ +++DEAH +KN + + L + ++LLTGTPLQN + EL+
Sbjct: 376 MILADCPELKKIQWRCVVIDEAHRLKNRNCKLLEGLKLMALEHKVLLTGTPLQNSVEELF 435
Query: 624 SLMHFLMPHIFQSHQEFKDWFCNPISGMVEGQEKVNKEVVDRLHNVLRPFILRRLKRDVE 683
SL++FL P F S F + F G ++ +E+V K L ++L+P +LRRLK DVE
Sbjct: 436 SLLNFLEPQQFPSETAFLEEF-----GDLKTEEQVKK-----LQSILKPMMLRRLKDDVE 485
Query: 684 KQLPMKQEHVIYCRLSKRQRNLYEDFIASSETQATLASA--NFFGMISVIMQLRKVCNHP 741
K L KQE +I L+ Q+ Y + + + + + N +I+ +M+LRK CNHP
Sbjct: 486 KNLAPKQETIIEVELTNIQKKYYRAILEKNFSFLSKGANQHNMPNLINTMMELRKCCNHP 545
Query: 742 DLFEG 746
L G
Sbjct: 546 YLING 550
Score = 368 (134.6 bits), Expect = 5.6e-68, Sum P(5) = 5.6e-68
Identities = 83/183 (45%), Positives = 114/183 (62%)
Query: 985 FPDRRLIQFDCGKLQELAILLRKLKSDGHRALIFTQMTKMLDILEEFISLYGYTYMRLDG 1044
F + +IQ GKL + LL KL + GH+ LIF+QM + LDILE+++ YTY R+DG
Sbjct: 570 FQLQAMIQA-AGKLVLIDKLLPKLIAGGHKVLIFSQMVRCLDILEDYLIQRRYTYERIDG 628
Query: 1045 STQPEERQTLMQRF-NTNPKIFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQD 1103
+ RQ + RF + F+F+L TR+GG+GINL ADT I +DSDWNP D QAQ
Sbjct: 629 RVRGNLRQAAIDRFCKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQA 688
Query: 1104 RCHRIGQTREVHIYRLISESTIEENILKKANQKRALDDLVIQS----GGYNTEFFKKLDP 1159
RCHRIGQ++ V +YRLI+ ++ E + KA+ K LD V+Q GG N ++L
Sbjct: 689 RCHRIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQDINRKGGTNG--VQQLSK 746
Query: 1160 MEL 1162
ME+
Sbjct: 747 MEV 749
Score = 39 (18.8 bits), Expect = 5.6e-68, Sum P(5) = 5.6e-68
Identities = 5/14 (35%), Positives = 9/14 (64%)
Query: 1581 VWSRDCVPSPDVWL 1594
+W D P PD+++
Sbjct: 1307 LWKEDGPPDPDIYV 1320
Score = 38 (18.4 bits), Expect = 5.6e-68, Sum P(5) = 5.6e-68
Identities = 12/43 (27%), Positives = 20/43 (46%)
Query: 1799 LEFQRELVDSTISFPPRVNLSVYGSDLETSVNKSTRENHHLKD 1841
L++ R+ D T+ P +G+D ET +K + KD
Sbjct: 1898 LDWLRQQSDYTLDVPG------FGTDPETHRDKPKQRRQRCKD 1934
Score = 37 (18.1 bits), Expect = 5.6e-68, Sum P(5) = 5.6e-68
Identities = 11/55 (20%), Positives = 26/55 (47%)
Query: 25 NISKDVKKFWMKIEKLVLYKHQMEVDVRKKKALDKQLEFLLGQTERYSSMLAENL 79
++ + + W K+EK YK+ ++ ++ L+ L R + +LA+ +
Sbjct: 234 HMERPASESWQKLEKSREYKNSNQL---REYQLEGMNWLLFNWYNRKNCILADEM 285
Score = 37 (18.1 bits), Expect = 5.8e-34, Sum P(5) = 5.8e-34
Identities = 9/28 (32%), Positives = 15/28 (53%)
Query: 1039 YMRLDGSTQPEERQTLMQRFNTNPKIFL 1066
+ LD + +ER T +RFN + +L
Sbjct: 865 FSELDSDS--DERPTRSRRFNEKTRRYL 890
>UNIPROTKB|F1N8K8 [details] [associations]
symbol:CHD1 "Chromodomain-helicase-DNA-binding protein 1"
species:9031 "Gallus gallus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013
PROSITE:PS51194 SMART:SM00298 SMART:SM00490 Pfam:PF00385
GO:GO:0005524 GO:GO:0005634 GO:GO:0003677 GO:GO:0004386
InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR023780 InterPro:IPR023779
PROSITE:PS00598 InterPro:IPR025260 Pfam:PF13907
GeneTree:ENSGT00560000076896 OMA:AETHENE EMBL:AADN02065411
EMBL:AADN02065412 EMBL:AADN02065413 IPI:IPI00588290
Ensembl:ENSGALT00000023601 ArrayExpress:F1N8K8 Uniprot:F1N8K8
Length = 1804
Score = 423 (154.0 bits), Expect = 5.8e-68, Sum P(6) = 5.8e-68
Identities = 101/292 (34%), Positives = 157/292 (53%)
Query: 455 LREYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTIAMLAHLACEKGIWGPHLIVVPTS 514
LR+YQ GL WL + K + ILADEMGLGKTI TI+ L +L E ++GP L+VVP S
Sbjct: 478 LRDYQLNGL-WLAHSWCKGNSCILADEMGLGKTIQTISFLNYLFHEHQLYGPFLLVVPLS 536
Query: 515 VMLNWETEFLKWCPAFKILTYFGSAKERKFKR-QGWLKPNS----FHVCITTYRLIIQDS 569
+ +W+ E W P + Y G R R W+ P + F++ +TTY ++++D
Sbjct: 537 TLTSWQREIQTWAPQMNAVVYLGDITSRNMIRTHEWMHPQTKRLKFNILLTTYEILLKDK 596
Query: 570 KVFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPLQNDLMELWSLMHFL 629
W ++ +DEAH +KN S ++TL++ + I P ELW L+HF+
Sbjct: 597 SFLGGLNWAFIGVDEAHRLKNDDSLLYKTLIDLVT---IDSDTAPSCTIPQELW-LLHFI 652
Query: 630 MPHIFQSHQEFKDWFCNPISGMVEGQEKVNKEVVDRLHNVLRPFILRRLKRDVEKQLPMK 689
MP F S ++F++ G G ++KE L PF+LRR+K+DVEK LP K
Sbjct: 653 MPEKFSSWEDFEE---EHGKGREYGYASLHKE--------LEPFLLRRVKKDVEKSLPAK 701
Query: 690 QEHVIYCRLSKRQRNLYEDFIASSETQATLAS-ANFFGMISVIMQLRKVCNH 740
E ++ +S Q+ Y+ + + + S + G ++++M+L+K CNH
Sbjct: 702 VEQILRMEMSALQKQYYKWILTRNYKALSKGSKGSTSGFLNIMMELKKCCNH 753
Score = 391 (142.7 bits), Expect = 5.8e-68, Sum P(6) = 5.8e-68
Identities = 78/151 (51%), Positives = 108/151 (71%)
Query: 996 GKLQELAILLRKLKSDGHRALIFTQMTKMLDILEEFISLYGYTYMRLDGSTQPEERQTLM 1055
GKL L LL +L+ G+R LIF+QM +MLDIL E++ + + RLDGS + E R+ +
Sbjct: 780 GKLILLDKLLIRLRERGNRVLIFSQMVRMLDILAEYLKYRQFPFQRLDGSIKGELRKQAL 839
Query: 1056 QRFNTN-PKIFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQDRCHRIGQTREV 1114
FN + F F+LSTR+GG+GINL ADTV+ +DSDWNP D QAQ R HRIGQ ++V
Sbjct: 840 DHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQV 899
Query: 1115 HIYRLISESTIEENILKKANQKRALDDLVIQ 1145
+IYRL+++ ++EE+IL++A +K LD LVIQ
Sbjct: 900 NIYRLVTKGSVEEDILERAKKKMVLDHLVIQ 930
Score = 56 (24.8 bits), Expect = 5.8e-68, Sum P(6) = 5.8e-68
Identities = 24/100 (24%), Positives = 41/100 (41%)
Query: 191 AVDKVGRESSAEMGEDEAEPTVVEEGHVQGNGNDLLAGSKLDTSGSLVRRCDEINGGLSI 250
+ D E+ + +DE + + G V G G+D S+ + G C+E
Sbjct: 129 SADDSSSETKKKKHKDE-DWQMSGSGSVSGTGSD----SESEEDGDK-SSCEESESDYEP 182
Query: 251 SENHLLDIETSQVRDTSKKSGASTQKQALYDFSDEQEDGD 290
S+++ S K +K+ L D S+E+ED D
Sbjct: 183 KNKVKSRKPPSRIKPKSGKKSTGQKKRQL-DSSEEEEDDD 221
Score = 49 (22.3 bits), Expect = 1.9e-67, Sum P(5) = 1.9e-67
Identities = 17/65 (26%), Positives = 29/65 (44%)
Query: 198 ESSAEMGEDEAEPTVVEEGHVQGNGNDLLAGSKLDTSGSLVRRCDEINGGLSISENHLLD 257
E S E+ + + G G+G+ +GS D S S D +G S S++ +
Sbjct: 7 EESVRNSSGESSRSDDDSGSASGSGSGSSSGSSSDGSSSQSGSSDSESGSESGSQSES-E 65
Query: 258 IETSQ 262
+TS+
Sbjct: 66 SDTSR 70
Score = 47 (21.6 bits), Expect = 5.8e-68, Sum P(6) = 5.8e-68
Identities = 12/54 (22%), Positives = 27/54 (50%)
Query: 1564 PVKRVLMIKPEKLKKGNVWSRDCVPSPDV-WLPQEDAILCAVVHEYG-PNWSLV 1615
P+ + + PE+ K+ + D+ W ++D+ L ++EYG +W ++
Sbjct: 1216 PLHKSIPSDPEERKRYVIPCHTKAAHFDIDWGKEDDSNLLVGIYEYGYGSWEMI 1269
Score = 46 (21.3 bits), Expect = 3.9e-67, Sum P(5) = 3.9e-67
Identities = 18/57 (31%), Positives = 25/57 (43%)
Query: 69 ERYSSMLAENLVDSHKPVQQSPMREQPGIQYKEADENGAEEPGVQSKEADEDDAEQH 125
E S +N V S KP P R +P K G ++ + S E +EDD E +
Sbjct: 175 ESESDYEPKNKVKSRKP----PSRIKPKSGKKST---GQKKRQLDSSEEEEDDDEDY 224
Score = 45 (20.9 bits), Expect = 5.8e-68, Sum P(6) = 5.8e-68
Identities = 11/40 (27%), Positives = 24/40 (60%)
Query: 86 VQQSPMREQPGIQYKEAD-ENGAEEPGVQSKEADEDDAEQ 124
VQ+S + ++ Q K A ++G+EE S+++ +D + +
Sbjct: 97 VQRSAVLKKQQQQQKAASSDSGSEEDSSSSEDSADDSSSE 136
Score = 39 (18.8 bits), Expect = 5.8e-68, Sum P(6) = 5.8e-68
Identities = 10/42 (23%), Positives = 19/42 (45%)
Query: 1743 KSTREPARRVKFTNLGQSSKLLSAALHDANSRQQDDKVSNFD 1784
+ TR ++K + + + K S+ S + DD+ N D
Sbjct: 1327 RKTRNKKNKMKASKIKEEIKSDSSPQPSEKSDEDDDEEDNKD 1368
Score = 38 (18.4 bits), Expect = 7.3e-68, Sum P(5) = 7.3e-68
Identities = 10/41 (24%), Positives = 19/41 (46%)
Query: 1309 NQLRPIDRYAIRFLELWDPIIDKTAVESEVKFEEREWELDR 1349
N+++ ++ + + L D + TA V E ELD+
Sbjct: 1457 NEIKSENKEKSKKIPLLDTPVHITATSEPVPISEESEELDQ 1497
>FB|FBgn0086902 [details] [associations]
symbol:kis "kismet" species:7227 "Drosophila melanogaster"
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS;IDA] [GO:0007379 "segment
specification" evidence=IMP] [GO:0007350 "blastoderm segmentation"
evidence=IMP] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0019730 "antimicrobial humoral
response" evidence=IMP] [GO:0007298 "border follicle cell
migration" evidence=IMP] [GO:0005875 "microtubule associated
complex" evidence=IDA] [GO:0007411 "axon guidance" evidence=IMP]
[GO:0016322 "neuron remodeling" evidence=IMP] [GO:0040011
"locomotion" evidence=IMP] [GO:0007614 "short-term memory"
evidence=IMP] [GO:0046622 "positive regulation of organ growth"
evidence=IMP] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IMP] [GO:0007476 "imaginal disc-derived
wing morphogenesis" evidence=IMP] [GO:0007031 "peroxisome
organization" evidence=IMP] [GO:0008340 "determination of adult
lifespan" evidence=IMP] InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271
Pfam:PF07533 PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298
SMART:SM00490 SMART:SM00592 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0007411 GO:GO:0045892 GO:GO:0005875
EMBL:AE014134 GO:GO:0003677 GO:GO:0006200 GO:GO:0016322
GO:GO:0007031 GO:GO:0016887 GO:GO:0007298 GO:GO:0007614
GO:GO:0004386 GO:GO:0007379 GO:GO:0046622 GO:GO:0007476
GO:GO:0019730 InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0007350 InterPro:IPR023780
KO:K14437 GeneTree:ENSGT00560000077077 RefSeq:NP_001137761.1
UniGene:Dm.3182 ProteinModelPortal:B7Z002 SMR:B7Z002 STRING:B7Z002
EnsemblMetazoa:FBtr0299837 GeneID:33185 KEGG:dme:Dmel_CG3696
CTD:33185 FlyBase:FBgn0086902 OMA:TTFEMIV OrthoDB:EOG4BZKHC
PhylomeDB:B7Z002 GenomeRNAi:33185 NextBio:782323 Bgee:B7Z002
Uniprot:B7Z002
Length = 5517
Score = 479 (173.7 bits), Expect = 7.0e-68, Sum P(5) = 7.0e-68
Identities = 117/305 (38%), Positives = 168/305 (55%)
Query: 455 LREYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTIAMLAHLACEKGIWGPHLIVVPTS 514
LR YQ GL+WL + N ILADEMGLGKTI ++ + H E GI GP L++ P S
Sbjct: 2029 LRPYQLEGLNWLKFSWYNTHNCILADEMGLGKTIQSLTFV-HSVYEYGIRGPFLVIAPLS 2087
Query: 515 VMLNWETEFLKWCPAFKILTYFGSAKERK--------FKRQGW--LK-PNSFHVCITTYR 563
+ NW+ EF W ++ Y GS ++ +K + LK P F+V ITT+
Sbjct: 2088 TIPNWQREFEGWTD-MNVVVYHGSVTSKQMIQDYEYYYKTESGKVLKEPIKFNVLITTFE 2146
Query: 564 LIIQDSKVFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPLQNDLMELW 623
+I+ D K W+ ++DEAH +KN + + L N + R+LL+GTPLQN++ EL+
Sbjct: 2147 MIVTDYMDLKAFNWRLCVIDEAHRLKNRNCKLLEGLRQLNLEHRVLLSGTPLQNNISELF 2206
Query: 624 SLMHFLMPHIFQSHQEFKDWFCNPISGMVEGQEKVNKEVVDRLHNVLRPFILRRLKRDVE 683
SL++FL P F S +EF F G + +E+VNK L +L+P +LRRLK DVE
Sbjct: 2207 SLLNFLEPSQFSSQEEFMSEF-----GSLRTEEEVNK-----LQALLKPMMLRRLKDDVE 2256
Query: 684 KQLPMKQEHVIYCRLSKRQRNLYEDFIAS--SETQATLASANFFGMISVIMQLRKVCNHP 741
K L K+E +I L+ Q+ Y + S + SAN +++ +M+LRK C HP
Sbjct: 2257 KSLAPKEETIIEVELTNIQKKYYRGILEQNFSFLKKGTTSANIPNLMNTMMELRKCCIHP 2316
Query: 742 DLFEG 746
L G
Sbjct: 2317 YLLNG 2321
Score = 375 (137.1 bits), Expect = 7.0e-68, Sum P(5) = 7.0e-68
Identities = 93/236 (39%), Positives = 136/236 (57%)
Query: 988 RRLIQFDCGKLQELAILLRKLKSDGHRALIFTQMTKMLDILEEFISLYGYTYMRLDGSTQ 1047
+ LI GK+ + LL KLK++GHR LIF+QM + LDILE+++ Y + R+DG +
Sbjct: 2343 KNLI-LSAGKMVLIDKLLPKLKANGHRVLIFSQMVRCLDILEDYLVYRKYPFERIDGRIR 2401
Query: 1048 PEERQTLMQRFNT-NPKIFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQDRCH 1106
RQ + R++ F+F+L T++GG+GINL ADTVI YDSDWNP D QAQ RCH
Sbjct: 2402 GNLRQEAIDRYSKPGSDRFVFLLCTKAGGLGINLTAADTVIIYDSDWNPQNDLQAQARCH 2461
Query: 1107 RIGQTREVHIYRLISESTIEENILKKANQKRALDDLVIQSGGYNTEFFKKLDPMELFSGH 1166
RIGQ + V IYRL+ +T E + KA+ K LD V+QS NT+ K +
Sbjct: 2462 RIGQRKMVKIYRLLCRNTYEREMFDKASMKLGLDKAVLQS--MNTQGSKD-------GNN 2512
Query: 1167 RTLPMKTMQKEKAINNGNEVSLSNADVEAALKCVEDEADYMALKRAEQEEAVDNQE 1222
+ L K + E + G ++ + D A K E++ D + LKR Q +++++
Sbjct: 2513 KQLSKKEI--EDLLKKGAYGAVMDDD-NAGDKFCEEDIDSI-LKRRTQVITMESEK 2564
Score = 53 (23.7 bits), Expect = 2.3e-33, Sum P(6) = 2.3e-33
Identities = 32/128 (25%), Positives = 50/128 (39%)
Query: 1174 MQKEKAINNGNEVSLSNADVEAALKCVEDEADYMALKRAEQE--EAVDNQEFTEEAVGRP 1231
++ EK +N E S D A VE + D A+ RAE + E+ N T +
Sbjct: 3134 IESEKK-DNEKETKESTGDAPA----VEAKKDSAAIARAEGDKTESCTNNATTN--ISTT 3186
Query: 1232 EDDELVIEDTVRTDEPTDQGGCM--TANNDNGMMLTGNDPKEERA----LTFAAKEDDVD 1285
+ T T+ P+ + T ++ N G D +E A T AA ED
Sbjct: 3187 TTTTTITNTTTTTNNPSSKAANSNNTTDHANSNSHLGLDEEESVAGSYPPTVAAVEDATT 3246
Query: 1286 MLADVKQM 1293
M ++ +
Sbjct: 3247 MWPSMQDL 3254
Score = 51 (23.0 bits), Expect = 3.7e-33, Sum P(6) = 3.7e-33
Identities = 36/169 (21%), Positives = 78/169 (46%)
Query: 1092 DWNP-AMDQQAQDRCHRIGQTREVHIYRLISESTIEENILKKANQKRALDDLVIQSGGYN 1150
D+NP +++A D + + + L+ E IE++ K + K +++L + G
Sbjct: 3725 DFNPETTEKEALDESTNLNKDKS-STETLVPE--IEDS--KPSEDKMEVEELPVAENGEK 3779
Query: 1151 TEFFKKLDPME--LFSGHR----TLP---MKTMQKEKAINNGNEVSLSNADVEAALKCVE 1201
+K E FS + +P + M+ ++A N E + D E+ K E
Sbjct: 3780 EGSPEKCSDAEDKKFSEEKPSSPAVPDGKVSEMEADEAAPNTEENC--SGDSESPEKECE 3837
Query: 1202 DEADYMALKRAEQEEAVDNQEFTEEAVGRPEDDELVIEDTVRTDEPTDQ 1250
D+ +++ E+E+ ++ E EE + E+ E + + ++ + EP+++
Sbjct: 3838 DKV----VEKVEEEKGENSYEKAEE---QKEETEKLEKSSIES-EPSEK 3878
Score = 50 (22.7 bits), Expect = 4.7e-33, Sum P(6) = 4.7e-33
Identities = 26/106 (24%), Positives = 40/106 (37%)
Query: 1143 VIQSGGYNTEFFKKLDPMELFSGHRTLPMKTMQKEKAINNGNEVSLSNADVEAALKCVED 1202
V++ G Y +E F DP F K +E + L + E A K
Sbjct: 3583 VLKHGLYRSETFIFNDPNFSFGESE----KRFIRELEAQIQRTIKLEAFNAEKAEKLAAA 3638
Query: 1203 EADYMALKRAEQEEAVDNQEFTEEAVGRPEDDELVI-EDTVRTDEP 1247
E D K A E+A + + + DDEL+ E ++ + P
Sbjct: 3639 EKDAATEKAAATEKAAAEKAASVKNEVIDLDDELMTNESVIKKESP 3684
Score = 48 (22.0 bits), Expect = 9.6e-32, Sum P(7) = 9.6e-32
Identities = 8/21 (38%), Positives = 16/21 (76%)
Query: 1124 TIEENILKKANQKRALDDLVI 1144
TIEE ++ K +++ LD++V+
Sbjct: 4307 TIEEPVIGKEKKRKKLDEIVL 4327
Score = 46 (21.3 bits), Expect = 7.0e-68, Sum P(5) = 7.0e-68
Identities = 17/60 (28%), Positives = 28/60 (46%)
Query: 1232 EDDELVIEDTVRTD---EP-TDQGGCM----TANNDNGMMLTGNDPKEERALTFAAKEDD 1283
E DEL+I+ ++ P + GG + TA N + L+G+ A AA E++
Sbjct: 5396 EADELIIQPILKKPTAANPGSSHGGSVDDLDTAENTSAANLSGSSSSSAAAAAAAAAEEN 5455
Score = 46 (21.3 bits), Expect = 2.0e-67, Sum P(6) = 2.0e-67
Identities = 20/87 (22%), Positives = 39/87 (44%)
Query: 199 SSAEMGEDEAEPTVVEEGHVQGNGNDLLAGSKLDTSGSLVRRCDEINGGLSISENHLLDI 258
S + + +P+ H+ N+ A S D+S V D N + S N +++
Sbjct: 816 SQPQQQTQQQQPSTPSH-HLSSILNET-ANSN-DSSTLAVAANDSNNSSSNSSTNSIVNN 872
Query: 259 ETSQVRDTSKKSG----ASTQKQALYD 281
+ + V D++ +S ++ Q+Q L D
Sbjct: 873 QPTSVHDSNSQSSINSSSNNQQQLLMD 899
Score = 46 (21.3 bits), Expect = 9.5e-66, Sum P(7) = 9.5e-66
Identities = 15/86 (17%), Positives = 31/86 (36%)
Query: 1770 DANSRQQDDKVSNFDRREDGPVIEQLDLTLEFQRELVDSTISFPPRVNLSVYGSDLETSV 1829
D S ++D++ + D P +E + R D T S ++ + T++
Sbjct: 3133 DIESEKKDNEKETKESTGDAPAVEAKKDSAAIARAEGDKTESCTNNATTNISTTTTTTTI 3192
Query: 1830 NKSTRENHHLKDSQVAENRFRDAARA 1855
+T ++ N D A +
Sbjct: 3193 TNTTTTTNNPSSKAANSNNTTDHANS 3218
Score = 44 (20.5 bits), Expect = 2.7e-66, Sum P(6) = 2.7e-66
Identities = 11/27 (40%), Positives = 15/27 (55%)
Query: 1245 DEPTDQGGCMTANNDNGMMLTGNDPKE 1271
DE D G T ++D+ LTG D K+
Sbjct: 2991 DEVDDDGTTTTKDSDS-TKLTGGDNKD 3016
Score = 44 (20.5 bits), Expect = 2.3e-33, Sum P(6) = 2.3e-33
Identities = 8/22 (36%), Positives = 12/22 (54%)
Query: 857 DRASSVAWWNSLRCQKKPVYST 878
D+ S +WWN + C K + T
Sbjct: 2919 DQVPS-SWWNPICCDKSLLVGT 2939
Score = 43 (20.2 bits), Expect = 7.0e-68, Sum P(5) = 7.0e-68
Identities = 8/39 (20%), Positives = 17/39 (43%)
Query: 87 QQSPMREQPGIQYKEADENGAEEPGVQSKEADEDDAEQH 125
QQ ++QP Q ++ + +P Q+++ H
Sbjct: 795 QQHQTQQQPSQQVPQSQQQQVSQPQQQTQQQQPSTPSHH 833
Score = 39 (18.8 bits), Expect = 2.7e-66, Sum P(6) = 2.7e-66
Identities = 27/90 (30%), Positives = 39/90 (43%)
Query: 1662 TSNVGSGKALLKVTEDNVRTLLNVAAEQEDNELLLQKHFTALLSSVWRMKSRMGCRQ--N 1719
TS GSG+ + + +T A + + LL+ LL S+ RM S M Q
Sbjct: 4971 TSASGSGRGRQSSSRNQSQTTPTAADMAQLSSLLMPGADPHLLESLSRM-SNMDLAQATR 5029
Query: 1720 FSSSRNGLYLGGSFFSSV---TQTSCKSTR 1746
SS L G+ SS T TS +S++
Sbjct: 5030 LMSSLGMPPLSGTPSSSGGGNTSTSKRSSQ 5059
Score = 39 (18.8 bits), Expect = 9.8e-23, Sum P(5) = 9.8e-23
Identities = 11/54 (20%), Positives = 28/54 (51%)
Query: 683 EKQLPMKQEHVIYCRLSKRQRNLYEDFIASSE---TQATLASANFFGMISVIMQ 733
++Q P Q+H+ S++Q + + + + ++ +Q T++ A+ + MQ
Sbjct: 740 QQQSPHHQQHLPSYNQSQQQFDPFANILGDNQPAASQQTMSPAHVSSPVPAQMQ 793
Score = 38 (18.4 bits), Expect = 1.3e-66, Sum P(6) = 1.3e-66
Identities = 6/13 (46%), Positives = 9/13 (69%)
Query: 32 KFWMKIEKLVLYK 44
+ W K+EK +YK
Sbjct: 2012 ELWKKLEKTPVYK 2024
Score = 38 (18.4 bits), Expect = 9.5e-66, Sum P(7) = 9.5e-66
Identities = 7/28 (25%), Positives = 14/28 (50%)
Query: 1892 SDSVKCPKSKLRKTSMEHSEIQHSSPEP 1919
S + + K + ++ + + QHS P P
Sbjct: 4538 SSAAQLQKQQQQQQQQQQQQQQHSMPGP 4565
Score = 37 (18.1 bits), Expect = 7.0e-68, Sum P(5) = 7.0e-68
Identities = 7/23 (30%), Positives = 12/23 (52%)
Query: 193 DKVGRESSAEMGEDEAEPTVVEE 215
D+VG+ E+++E EE
Sbjct: 1748 DEVGKSDKESKPEEQSETVKTEE 1770
Score = 37 (18.1 bits), Expect = 9.6e-32, Sum P(7) = 9.6e-32
Identities = 8/26 (30%), Positives = 14/26 (53%)
Query: 884 LTVKHPVCDILQQKTVRRSYLYSSKL 909
L + P +++Q TV++ L KL
Sbjct: 3933 LKARFPDLEVIQPATVKQQKLEKPKL 3958
>RGD|1594200 [details] [associations]
symbol:LOC680231 "similar to chromodomain helicase DNA binding
protein 9" species:10116 "Rattus norvegicus" [GO:0003677 "DNA
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271
Pfam:PF07533 PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298
SMART:SM00490 SMART:SM00592 Pfam:PF00385 RGD:1594200 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR023780 OrthoDB:EOG4548XQ IPI:IPI00957597
Ensembl:ENSRNOT00000018201 Uniprot:D3ZVE2
Length = 2881
Score = 464 (168.4 bits), Expect = 1.0e-67, Sum P(4) = 1.0e-67
Identities = 119/314 (37%), Positives = 168/314 (53%)
Query: 455 LREYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTIAMLAHLACEKGIWGPHLIVVPTS 514
LREYQ GL+WL+ + R N ILADEMGLGKTI +I L + GI GP LI+ P S
Sbjct: 859 LREYQLEGLNWLLFNWYNRRNCILADEMGLGKTIQSITFLYEVLLT-GIRGPFLIIAPLS 917
Query: 515 VMLNWETEFLKWCPAFKILTYFGSAKERK--------FK-RQGWLKPNS--FHVCITTYR 563
+ NWE EF W ++ Y GS R+ F+ QG + + F ITT+
Sbjct: 918 TIANWEREFRTWTD-INVVVYHGSLISRQMIQQYEMYFRDSQGRIIRGAYRFQAIITTFE 976
Query: 564 LIIQDSKVFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPLQNDLMELW 623
+I+ +W+ +I+DEAH +KN + + L N + ++LLTGTPLQN + EL+
Sbjct: 977 MILGGCGELNAIEWRCVIIDEAHRLKNKNCKLLEGLKLMNLEHKVLLTGTPLQNTVEELF 1036
Query: 624 SLMHFLMPHIFQSHQEFKDWFCNPISGMVEGQEKVNKEVVDRLHNVLRPFILRRLKRDVE 683
SL+HFL P F S F F G ++ +E+V K L +L+P +LRRLK DVE
Sbjct: 1037 SLLHFLEPLRFPSESTFMQEF-----GDLKTEEQVQK-----LQAILKPMMLRRLKEDVE 1086
Query: 684 KQLPMKQEHVIYCRLSKRQRNLYEDFIAS--SETQATLASANFFGMISVIMQLRKVCNHP 741
K+L K+E +I L+ Q+ Y + S N +++ +M+LRK CNHP
Sbjct: 1087 KRLAPKEETIIEVELTNIQKKYYRAILEKNFSFLSKGAGQTNVPNLVNTMMELRKCCNHP 1146
Query: 742 DLFEG--RPIVSSF 753
L +G I+ F
Sbjct: 1147 YLIKGAEEKIIGEF 1160
Score = 367 (134.2 bits), Expect = 1.0e-67, Sum P(4) = 1.0e-67
Identities = 88/226 (38%), Positives = 130/226 (57%)
Query: 990 LIQFDCGKLQELAILLRKLKSDGHRALIFTQMTKMLDILEEFISLYGYTYMRLDGSTQPE 1049
+IQ GKL + LL K+K+ GH+ LIF+QM + LDILE+++ Y Y R+DG +
Sbjct: 1176 MIQ-SAGKLVLIDKLLPKMKAGGHKVLIFSQMVRCLDILEDYLIHKRYLYERIDGRVRGN 1234
Query: 1050 ERQTLMQRFNT-NPKIFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQDRCHRI 1108
RQ + RF+ + F+F+L TR+GG+GINL ADT I +DSDWNP D QAQ RCHRI
Sbjct: 1235 LRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRI 1294
Query: 1109 GQTREVHIYRLISESTIEENILKKANQKRALDDLVIQS-GGYNTEFFKKLDPMELFSGHR 1167
GQ + V +YRL++ ++ E + +A+ K LD V+QS G ++ SG +
Sbjct: 1295 GQNKAVKVYRLVTRNSYEREMFDRASLKLGLDKAVLQSMSGRDSNV----------SGIQ 1344
Query: 1168 TLPMKTMQKEKAINNGNEVSLSNADVEAALKCVEDEADYMALKRAE 1213
L K + E + G ++ + E + C ED D + L+R +
Sbjct: 1345 QLSKKEI--EDLLRRGAYGAIMEEEDEGSKFCEED-IDQILLRRTK 1387
Score = 43 (20.2 bits), Expect = 1.6e-65, Sum P(6) = 1.6e-65
Identities = 20/86 (23%), Positives = 34/86 (39%)
Query: 1711 KSRMGCRQNFSSSRNGLYLGGSFFSSVTQTSCKSTREPARRVKFTNLGQSSKLLSAALHD 1770
+S R + SSS + S SS + +SC S + SS S++
Sbjct: 2141 RSSCSSRSSSSSSSSSCSHSRSGSSSSSSSSCSSASSSS----------SSSSSSSSSSS 2190
Query: 1771 ANSRQQDDKVSNFDRREDGPVIEQLD 1796
++S ++ D +RE P + D
Sbjct: 2191 SSSSEESDSEEEVQKREGTPHAKAYD 2216
Score = 41 (19.5 bits), Expect = 1.0e-67, Sum P(4) = 1.0e-67
Identities = 11/56 (19%), Positives = 28/56 (50%)
Query: 1213 EQEEAVDNQEFTEEAVGRPEDDELVIEDTVRTDEPTDQGGCMTANNDNGMMLTGND 1268
E ++V+ +E E++ GR ++++ E + + TD+G ++ + + D
Sbjct: 2821 ESSKSVEIKE--EDSRGRDQEEKGGTEPSPLNENSTDEGSERASSGSDSSSSSSED 2874
Score = 41 (19.5 bits), Expect = 4.2e-33, Sum P(5) = 4.2e-33
Identities = 11/33 (33%), Positives = 14/33 (42%)
Query: 1580 NVWSRD-CVPSPDVWLPQEDAILCAVVHEYGPN 1611
N+ + D C+ W PQ D A H G N
Sbjct: 1265 NLTAADTCIIFDSDWNPQNDLQAQARCHRIGQN 1297
Score = 41 (19.5 bits), Expect = 2.7e-32, Sum P(6) = 2.7e-32
Identities = 12/41 (29%), Positives = 20/41 (48%)
Query: 952 SVFLQPTYKEKCSEVLS--PLLFPIRPAIVRRQVYFPDRRL 990
++F+QP +E+ S L LL +R +R F +L
Sbjct: 1911 NIFIQPITEERASRTLYRIELLRKVREQALRHPQLFERLKL 1951
Score = 39 (18.8 bits), Expect = 1.0e-67, Sum P(4) = 1.0e-67
Identities = 17/58 (29%), Positives = 26/58 (44%)
Query: 212 VVEEGHVQGN-GNDLLAGSKLD-----TSGSLVRRCD---EINGGLSISENHLLDIET 260
++ H QGN N L+ +D SG + + E NG S+ EN L +E+
Sbjct: 337 ILHSSHPQGNYSNSKLSPMHMDFPDPADSGPPMGHFNDHVETNGFSSLDENLLHQVES 394
Score = 39 (18.8 bits), Expect = 1.6e-65, Sum P(6) = 1.6e-65
Identities = 11/32 (34%), Positives = 16/32 (50%)
Query: 1787 EDGPVIEQLDLTLEFQRELVDSTISFPPRVNL 1818
+D P + LD L+ V+ +F PRV L
Sbjct: 2492 DDAPKRKDLDRWLKEHPGYVEDLGAFIPRVQL 2523
Score = 39 (18.8 bits), Expect = 1.6e-65, Sum P(6) = 1.6e-65
Identities = 13/49 (26%), Positives = 23/49 (46%)
Query: 1441 LTSESKAVKEE-PSVEPMSIDDDFYDEDATFSDAMSPPSTSQKKRKKAE 1488
LTS + + + P VE + + + E+ S+ S S + R K+E
Sbjct: 2029 LTSSPRLLGAKGPLVEDVRVKSESLAEEPQSSEEESMSSMETRTRVKSE 2077
Score = 37 (18.1 bits), Expect = 2.7e-67, Sum P(4) = 2.7e-67
Identities = 8/28 (28%), Positives = 12/28 (42%)
Query: 1915 SSPEPVSNQSVATKDANLRFDLIQEAWL 1942
S+P P + K FD+ + WL
Sbjct: 1574 SAPVPRGRKGKKVKTQTSSFDIQKAEWL 1601
Score = 37 (18.1 bits), Expect = 2.7e-67, Sum P(4) = 2.7e-67
Identities = 9/41 (21%), Positives = 21/41 (51%)
Query: 1443 SESKAVKEEPSVEPMSIDDDFYDEDATFSDAMSPPSTSQKK 1483
S + +E+ EP ++++ DE + + + S S+S +
Sbjct: 2833 SRGRDQEEKGGTEPSPLNENSTDEGSERASSGSDSSSSSSE 2873
WARNING: HSPs involving 322 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.317 0.133 0.387 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 1992 1767 0.00092 125 3 11 22 0.41 34
40 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 572
No. of states in DFA: 637 (68 KB)
Total size of DFA: 724 KB (2311 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 156.20u 0.12s 156.32t Elapsed: 00:00:13
Total cpu time: 156.31u 0.12s 156.43t Elapsed: 00:00:13
Start: Fri May 10 04:38:36 2013 End: Fri May 10 04:38:49 2013
WARNINGS ISSUED: 2