AmiGO: BLAST Results


BLAST match view associations BLAST with TIL2 TIL2 TIL2 AT2G27120	protein from Arabidopsis thaliana	0.
BLAST match view associations BLAST with POLE POLE POLE DNA polymerase	protein from Homo sapiens	0.
BLAST match view associations BLAST with POLE POLE POLE DNA polymerase epsilon catalytic subunit A	protein from Homo sapiens	0.
BLAST match view associations BLAST with POLE POLE POLE DNA polymerase	protein from Gallus gallus	0.
BLAST match view associations BLAST with Pole Pole Pole polymerase (DNA directed), epsilon	protein from Mus musculus	0.
BLAST match view associations BLAST with pole pole pole polymerase (DNA directed), epsilon	gene_product from Danio rerio	0.
BLAST match view associations BLAST with POLE POLE POLE DNA polymerase	protein from Bos taurus	0.
BLAST match view associations BLAST with POLE POLE POLE DNA polymerase	protein from Canis lupus familiaris	0.
BLAST match view associations BLAST with POLE POLE POLE DNA polymerase	protein from Homo sapiens	0.
BLAST match view associations BLAST with POL2 POL2 POL2 Catalytic subunit of DNA polymerase (II) epsilon	gene from Saccharomyces cerevisiae	0.
BLAST match view associations BLAST with MGG_03850 MGG_03850 MGG_03850 DNA polymerase	protein from Magnaporthe oryzae 70-15	0.
BLAST match view associations BLAST with POL2 POL2 POL2	gene_product from Candida albicans	0.
BLAST match view associations BLAST with DDB_G0283189 DDB_G0283189 DDB_G0283189 putative DNA polymerase epsilon subunit A	gene from Dictyostelium discoideum	0.
BLAST match view associations BLAST with POLE POLE POLE DNA polymerase	protein from Gallus gallus	0.
BLAST match view associations BLAST with POLE POLE POLE DNA polymerase	protein from Homo sapiens	0.
BLAST match view associations BLAST with DNApol-epsilon DNApol-epsilon DNApol-epsilon DNA polymerase epsilon	protein from Drosophila melanogaster	0.
BLAST match view associations BLAST with F33H2.5 F33H2.5 F33H2.5	gene from Caenorhabditis elegans	0.
BLAST match view associations BLAST with PFF1470c PFF1470c PFF1470c DNA polymerase epsilon, catalytic subunit a, putative	gene from Plasmodium falciparum	1.2e-221
BLAST match view associations BLAST with PFF1470c PFF1470c PFF1470c DNA polymerase epsilon, catalytic subunit a, putative	protein from Plasmodium falciparum 3D7	1.2e-221
BLAST match view associations BLAST with POLE POLE POLE Uncharacterized protein	protein from Sus scrofa	1.0e-76
BLAST match view associations BLAST with POLE POLE POLE DNA polymerase epsilon catalytic subunit A	protein from Homo sapiens	1.1e-61
BLAST match view associations BLAST with POLE POLE POLE DNA polymerase epsilon catalytic subunit A	protein from Homo sapiens	5.2e-56
BLAST match view associations BLAST with POLE POLE POLE DNA polymerase epsilon catalytic subunit A	protein from Homo sapiens	5.7e-53
BLAST match view associations BLAST with Pole Pole Pole polymerase (DNA directed), epsilon, catalytic subunit	gene from Rattus norvegicus	6.2e-29
BLAST match view associations BLAST with MA_0885 MA_0885 MA_0885 DNA polymerase	protein from Methanosarcina acetivorans C2A	1.2e-11
BLAST match view associations BLAST with VC_1212 VC_1212 VC_1212 DNA polymerase	protein from Vibrio cholerae O1 biovar El Tor str. N16961	1.3e-07
BLAST match view associations BLAST with VC_1212 VC_1212 VC_1212 DNA polymerase II	protein from Vibrio cholerae O1 biovar El Tor	1.3e-07
BLAST match view associations BLAST with polB polB polB DNA polymerase II	protein from Escherichia coli K-12	4.2e-07
BLAST match view associations BLAST with DNApol-delta DNApol-delta DNApol-delta DNA-polymerase-delta	protein from Drosophila melanogaster	6.7e-07
BLAST match view associations BLAST with SO_1820 SO_1820 SO_1820 DNA polymerase II	protein from Shewanella oneidensis MR-1	1.9e-06
BLAST match view associations BLAST with PF10_0165 PF10_0165 PF10_0165 DNA polymerase delta catalytic subunit	gene from Plasmodium falciparum	1.3e-05
BLAST match view associations BLAST with PF10_0165 PF10_0165 PF10_0165 DNA polymerase	protein from Plasmodium falciparum 3D7	1.3e-05
BLAST match view associations BLAST with dpo1 dpo1 dpo1 DNA polymerase 1	protein from Sulfolobus solfataricus P2	2.4e-05
BLAST match view associations BLAST with GSU3245 GSU3245 GSU3245 DNA polymerase	protein from Geobacter sulfurreducens PCA	4.5e-05
BLAST match view associations BLAST with GSU_3245 GSU_3245 GSU_3245 DNA polymerase II, putative	protein from Geobacter sulfurreducens PCA	4.5e-05
BLAST match view associations BLAST with B10H4.020 B10H4.020 B10H4.020 DNA polymerase	protein from Neurospora crassa	5.1e-05
BLAST match view associations BLAST with Y47D3A.29 Y47D3A.29 Y47D3A.29 DNA polymerase	protein from Caenorhabditis elegans	8.8e-05
BLAST match view associations BLAST with Y47D3A.29a Y47D3A.29a Y47D3A.29a	gene from Caenorhabditis elegans	9.7e-05
BLAST match view associations BLAST with Y47D3A.29 Y47D3A.29 Y47D3A.29 DNA polymerase	protein from Caenorhabditis elegans	9.7e-05
BLAST match view associations BLAST with polB polB polB DNA polymerase	protein from Pseudomonas aeruginosa PA7	0.00023
BLAST match view associations BLAST with POLA1 POLA1 POLA1 DNA polymerase	protein from Canis lupus familiaris	0.00061
BLAST match view associations BLAST with POLA1 POLA1 POLA1 Uncharacterized protein	protein from Canis lupus familiaris	0.00070
BLAST match view associations BLAST with wlaX wlaX wlaX Polysaccharide biosynthesis protein	protein from Campylobacter jejuni RM1221	0.00077
BLAST match view associations BLAST with CJE_1274 CJE_1274 CJE_1274 polysaccharide biosynthesis protein	protein from Campylobacter jejuni RM1221	0.00077
Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  000161
        (1988 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2059314 - symbol:TIL2 "TILTED 2" species:3702 ...  5088  0.        5
UNIPROTKB|E7ETS8 - symbol:POLE "DNA polymerase" species:9...  3450  0.        5
UNIPROTKB|Q07864 - symbol:POLE "DNA polymerase epsilon ca...  3450  0.        5
UNIPROTKB|E1C5P2 - symbol:POLE "DNA polymerase" species:9...  3449  0.        5
MGI|MGI:1196391 - symbol:Pole "polymerase (DNA directed),...  3425  0.        5
ZFIN|ZDB-GENE-070705-557 - symbol:pole "polymerase (DNA d...  3424  0.        5
UNIPROTKB|E1BIF0 - symbol:POLE "DNA polymerase" species:9...  3413  0.        5
UNIPROTKB|F1Q4D5 - symbol:POLE "DNA polymerase" species:9...  3407  0.        5
UNIPROTKB|F5H1D6 - symbol:POLE "DNA polymerase" species:9...  3348  0.        5
ASPGD|ASPL0000036818 - symbol:AN3067 species:162425 "Emer...  3339  0.        5
SGD|S000005206 - symbol:POL2 "Catalytic subunit of DNA po...  3250  0.        4
UNIPROTKB|G4NHG4 - symbol:MGG_03850 "DNA polymerase" spec...  3246  0.        3
CGD|CAL0000768 - symbol:POL2 species:5476 "Candida albica...  3216  0.        4
POMBASE|SPBC25H2.13c - symbol:cdc20 "DNA polymerase epsil...  3200  0.        5
DICTYBASE|DDB_G0283189 - symbol:DDB_G0283189 "putative DN...  3185  0.        7
UNIPROTKB|F1P1U4 - symbol:POLE "DNA polymerase" species:9...  3136  0.        1
UNIPROTKB|F5H7H6 - symbol:POLE "DNA polymerase" species:9...  3133  0.        2
FB|FBgn0264326 - symbol:DNApol-epsilon "DNA polymerase ep...  3001  0.        3
WB|WBGene00009368 - symbol:F33H2.5 species:6239 "Caenorha...  2996  0.        4
GENEDB_PFALCIPARUM|PFF1470c - symbol:PFF1470c "DNA polyme...   992  1.2e-221  9
UNIPROTKB|C6KTD8 - symbol:PFF1470c "DNA polymerase epsilo...   992  1.2e-221  9
UNIPROTKB|F1LSZ5 - symbol:Pole "DNA polymerase" species:1...  2049  5.5e-212  1
UNIPROTKB|I3L832 - symbol:POLE "Uncharacterized protein" ...   786  1.0e-76   1
UNIPROTKB|F5H5Q5 - symbol:POLE "DNA polymerase epsilon ca...   645  1.1e-61   1
UNIPROTKB|B3KS74 - symbol:POLE "cDNA FLJ35684 fis, clone ...   357  5.2e-56   2
UNIPROTKB|F5H7E4 - symbol:POLE "DNA polymerase epsilon ca...   563  5.7e-53   1
UNIPROTKB|F1LTB3 - symbol:Pole "Protein Pole" species:101...   365  2.7e-36   2
RGD|1594540 - symbol:Pole "polymerase (DNA directed), eps...   331  6.2e-29   2
UNIPROTKB|Q8TSB3 - symbol:MA_0885 "DNA polymerase" specie...   133  1.2e-11   3
UNIPROTKB|Q9KSP4 - symbol:VC_1212 "DNA polymerase" specie...    96  1.3e-07   4
TIGR_CMR|VC_1212 - symbol:VC_1212 "DNA polymerase II" spe...    96  1.3e-07   4
UNIPROTKB|P21189 - symbol:polB "DNA polymerase II" specie...   108  4.2e-07   4
FB|FBgn0263600 - symbol:DNApol-delta "DNA-polymerase-delt...   119  6.7e-07   4
TIGR_CMR|SO_1820 - symbol:SO_1820 "DNA polymerase II" spe...   108  1.9e-06   3
GENEDB_PFALCIPARUM|PF10_0165 - symbol:PF10_0165 "DNA poly...   144  1.3e-05   3
UNIPROTKB|Q7KQL4 - symbol:PF10_0165 "DNA polymerase" spec...   144  1.3e-05   3
UNIPROTKB|P26811 - symbol:dpo1 "DNA polymerase 1" species...   134  2.4e-05   4
UNIPROTKB|Q747M0 - symbol:GSU3245 "DNA polymerase" specie...    99  4.5e-05   6
TIGR_CMR|GSU_3245 - symbol:GSU_3245 "DNA polymerase II, p...    99  4.5e-05   6
UNIPROTKB|Q8X0N7 - symbol:B10H4.020 "DNA polymerase" spec...   138  5.1e-05   4
UNIPROTKB|Q9NAH1 - symbol:Y47D3A.29 "DNA polymerase" spec...    98  8.8e-05   5
WB|WBGene00012936 - symbol:Y47D3A.29a species:6239 "Caeno...    98  9.7e-05   5
UNIPROTKB|C7IVS4 - symbol:Y47D3A.29 "DNA polymerase" spec...    98  9.7e-05   5
UNIPROTKB|A6V6S5 - symbol:polB "DNA polymerase" species:3...    93  0.00023   3
UNIPROTKB|F6Y1C9 - symbol:POLA1 "DNA polymerase" species:...   107  0.00061   4
UNIPROTKB|E2QVU2 - symbol:POLA1 "Uncharacterized protein"...   107  0.00070   4
UNIPROTKB|Q5HTX3 - symbol:wlaX "Polysaccharide biosynthes...   120  0.00077   1
TIGR_CMR|CJE_1274 - symbol:CJE_1274 "polysaccharide biosy...   120  0.00077   1


>TAIR|locus:2059314 [details] [associations]
            symbol:TIL2 "TILTED 2" species:3702 "Arabidopsis
            thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003677 "DNA
            binding" evidence=IEA] [GO:0003887 "DNA-directed DNA polymerase
            activity" evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA]
            [GO:0006139 "nucleobase-containing compound metabolic process"
            evidence=IEA] [GO:0006260 "DNA replication" evidence=IEA]
            [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0008622 "epsilon
            DNA polymerase complex" evidence=IPI] InterPro:IPR006133
            InterPro:IPR006134 InterPro:IPR006172 InterPro:IPR012337
            InterPro:IPR013697 Pfam:PF00136 Pfam:PF03104 Pfam:PF08490
            SMART:SM00486 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0000166
            GO:GO:0046872 GO:GO:0003677 GO:GO:0006260 GO:GO:0008270
            GO:GO:0051539 SUPFAM:SSF53098 EMBL:AC005623 GO:GO:0008622
            GO:GO:0003887 eggNOG:COG0417 HSSP:Q56366 KO:K02324 IPI:IPI00548662
            PIR:A84669 RefSeq:NP_180280.2 UniGene:At.52932
            EnsemblPlants:AT2G27120.1 GeneID:817254 KEGG:ath:AT2G27120
            TAIR:At2g27120 OMA:RITTTEC Uniprot:F4IFN6
        Length = 2138

 Score = 5088 (1796.1 bits), Expect = 0., Sum P(5) = 0.
 Identities = 963/1198 (80%), Positives = 1061/1198 (88%)

Query:    22 SAEEELEAKLGYDLFSEGDKRLGWLLTFASSSLEDEDTRKVYSCIDLYFVSQDGSTFKSK 81
             SA +ELE KLG+ LFS+G+ RLGWLLTFASSS ED DT K +SC+DL+FV+QDGS+FK+K
Sbjct:    16 SAADELETKLGFGLFSQGETRLGWLLTFASSSWEDADTGKTFSCVDLFFVTQDGSSFKTK 75

Query:    82 YKFRPYFYAATKEKMEMDVEAYLRRRYESQIADIEILEKEDLDLKNHLSGLHKSYLKISF 141
             YKFRPY YAATK+ ME++VEAYLRRRYE Q+ADI+I+ KEDL LKNHLSGL K YLK+SF
Sbjct:    76 YKFRPYLYAATKDNMELEVEAYLRRRYERQVADIQIVHKEDLYLKNHLSGLQKKYLKVSF 135

Query:   142 DTVQQLMDVKKDLLHVVERNQAKFDAAEAYESILTGKREQRPQDFLDCIVDLREYDVPYH 201
             DTVQQL++VK+DLLH+VERN AKF+A EAYESIL+GKREQRPQD LD +VDLREYDVPYH
Sbjct:   136 DTVQQLVEVKRDLLHIVERNLAKFNALEAYESILSGKREQRPQDCLDSVVDLREYDVPYH 195

Query:   202 IRFAIDNDVRCGQWYDVSISSTGPLLEKRVDLLQRAEVHVCAFDIETTKLPLKFPDADYD 261
             +RFAIDNDVR GQWY+VSISST  +LEKR DLLQRAEV VCAFDIET KLPLKFPDA+YD
Sbjct:   196 VRFAIDNDVRSGQWYNVSISSTDVILEKRTDLLQRAEVRVCAFDIETVKLPLKFPDAEYD 255

Query:   262 IIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNVNNEIELLRLWFAHM 321
              IMMISYM+DGQG+LI NRECVG+DIEDLEYTPKPEFEGYFKVTNV NE+ELLR WF+HM
Sbjct:   256 QIMMISYMVDGQGFLITNRECVGKDIEDLEYTPKPEFEGYFKVTNVTNEVELLRKWFSHM 315

Query:   322 QEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDKNQGECRAKFACHLDCFAW 381
             QE+KPGIYVTYNGD+FDWPF+E RA+HHG KM+EELGF+CD+NQGECRAKF CHLDCF+W
Sbjct:   316 QELKPGIYVTYNGDFFDWPFIERRASHHGIKMNEELGFRCDQNQGECRAKFVCHLDCFSW 375

Query:   382 VKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQMMASYSVSDAVATYYLY 441
             VKRDSYLPQGSQGLKAVTK KLGYDPLEVNPEDMVRFA EKPQ MASYSVSDAVATYYLY
Sbjct:   376 VKRDSYLPQGSQGLKAVTKVKLGYDPLEVNPEDMVRFAMEKPQTMASYSVSDAVATYYLY 435

Query:   442 MTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVICPNKHQSDPEKFYRN 501
             MTYVHPF+FSLATIIPM PDEVLRKGSGTLCEMLLMV+AYKANV+CPNK+Q+DPEKFY+ 
Sbjct:   436 MTYVHPFVFSLATIIPMVPDEVLRKGSGTLCEMLLMVEAYKANVVCPNKNQADPEKFYQG 495

Query:   502 HLLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQLLNNLDRDLQYAIKVEGKMDLE 561
              LLESETYIGGHVECL+SGVFRSD+PTSFKLD SAY+QL++NL RDL+YAI VEGKM ++
Sbjct:   496 KLLESETYIGGHVECLQSGVFRSDIPTSFKLDASAYQQLIDNLGRDLEYAITVEGKMRMD 555

Query:   562 SVSNYDEVKNAIMEKLLRLQEEPIREECPLIYHLDVAAMYPNIILTNRLQPPSIVTDEVC 621
             SVSN+DEVK  I EKL +L+++PIREE PLIYHLDVAAMYPNIILTNRLQPPSIVTDEVC
Sbjct:   556 SVSNFDEVKEVIREKLEKLRDDPIREEGPLIYHLDVAAMYPNIILTNRLQPPSIVTDEVC 615

Query:   622 TACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYYHLKKQIESEFVD-GTNGHLSKSFLDLP 680
             TACDFN P KTCLRKLEWVWRG  F G +S+YYHLKKQIESE VD G N   SK FLDLP
Sbjct:   616 TACDFNGPEKTCLRKLEWVWRGVTFKGNKSEYYHLKKQIESESVDAGANMQSSKPFLDLP 675

Query:   681 KMEQQSRLKDRLKKYCQKAYKRVLDKPVTELREAGICMRENSFYVDTVRSFRDRRYEYKG 740
             K+EQQS+LK+RLKKYCQKAY RVLDKP+TE+REAGICMREN FYVDTVRSFRDRRYEYK 
Sbjct:   676 KVEQQSKLKERLKKYCQKAYSRVLDKPITEVREAGICMRENPFYVDTVRSFRDRRYEYKT 735

Query:   741 LNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHKCILNSFYGYVMRKGARWYSME 800
             LNKVWKGKLSEAKASGN IKIQEA DMVV+YDSLQLAHKCILNSFYGYVMRKGARWYSME
Sbjct:   736 LNKVWKGKLSEAKASGNLIKIQEAHDMVVVYDSLQLAHKCILNSFYGYVMRKGARWYSME 795

Query:   801 MAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLPGSFPENXXXXXXXXXXXXXIS 860
             MAGVVTYTGAKIIQNARLLIE+IGKPLELDTDGIWC LPGSFPEN             IS
Sbjct:   796 MAGVVTYTGAKIIQNARLLIERIGKPLELDTDGIWCALPGSFPENFTFKTIDMKKFT-IS 854

Query:   861 YPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEFEVDGPYKAMILPASKEEGIL 920
             YPCV+LNVDVA+NN+NDQYQTLVDPV KTY + SECSIEFEVDGPYKAMI+PASKEEGIL
Sbjct:   855 YPCVILNVDVAKNNSNDQYQTLVDPVRKTYNSRSECSIEFEVDGPYKAMIIPASKEEGIL 914

Query:   921 IKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFLHGSTIEECYSAVAAVAN 980
             IKKRYAVFN DGT+AELKGFE+KRRGELKLIKVFQAELFDKFLHGST+EECYSAVAAVAN
Sbjct:   915 IKKRYAVFNHDGTIAELKGFEMKRRGELKLIKVFQAELFDKFLHGSTLEECYSAVAAVAN 974

Query:   981 RWLDLLDNQGKDIADSELIDYISESSTMSKSLADYGEQKSCAVTTARRLSDFLGDTMVKD 1040
             RWLDLL+ QGKDIADSEL+DYISESSTMSKSLADYG+QKSCAVTTA+RL+DFLGDTMVKD
Sbjct:   975 RWLDLLEGQGKDIADSELLDYISESSTMSKSLADYGQQKSCAVTTAKRLADFLGDTMVKD 1034

Query:  1041 KGLRCQYIVACEPQGTPVSERAVPVAIFETDAEIMKFYLRKWCKTSSDVGIRSIVDWSYY 1100
             KGLRCQYIVA EP+GTPVSERAVPVAIF+TD    KFYL+KWCK SS  GIRSI+DW YY
Sbjct:  1035 KGLRCQYIVAREPEGTPVSERAVPVAIFQTDDPEKKFYLQKWCKISSYTGIRSIIDWMYY 1094

Query:  1101 KQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLYKKVREKEDKFRQRKLVDIFSSLKKD 1160
             KQRL SAIQK+ITIPAAMQKV+NPV RV HP WL KKV    DKFRQ K+VD+FSS  KD
Sbjct:  1095 KQRLHSAIQKVITIPAAMQKVANPVLRVRHPYWLEKKVC---DKFRQGKIVDMFSSANKD 1151

Query:  1161 DFLNKTCNAETNLMDENVEDLEDFPKKRRNSVNGPRPIVRCFEVNNEQKTVKTTDQVD 1218
                       +   D  V D+E+F K+ R SV GP+P+ R FEV+      K  +  D
Sbjct:  1152 ---------HSTTQDNVVADIEEFCKENRPSVKGPKPVARSFEVDRNHSEGKQQESWD 1200

 Score = 845 (302.5 bits), Expect = 0., Sum P(5) = 0.
 Identities = 175/323 (54%), Positives = 226/323 (69%)

Query:  1448 ILWISDDGVPDLGGTSEEDECFADEVHQPVLTYPGAYRKVSVELKIHHLSVNALLKSNQV 1507
             +LW+SD+GVPDLG  + E+   ADE     L +PGAYRKVSVELK+H L+VNALLKS+ V
Sbjct:  1625 VLWVSDNGVPDLGDINNEETFLADETS---LLFPGAYRKVSVELKVHRLAVNALLKSDLV 1681

Query:  1508 NEMEGGGLFGFDQDMNSGPYNNELCGFDETTSSAPAFRVVKQLIQRCLTDAVTSGNVFAD 1567
             +EMEGGG  G +   + G   N+   FDE    A AFRV+KQLI+R L DA  SGN++AD
Sbjct:  1682 SEMEGGGFLGVN---SRGSSLNDNGSFDENNGCAQAFRVLKQLIKRLLHDACNSGNIYAD 1738

Query:  1568 AILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEFRKLGATIIFANFSKVIIDT 1627
             +ILQHL  WL SP SKLHDP LH +LHKVMQKVFA+LL + R+LGA II+A+FSKVIIDT
Sbjct:  1739 SILQHLSWWLRSPSSKLHDPALHLMLHKVMQKVFALLLTDLRRLGAIIIYADFSKVIIDT 1798

Query:  1628 GKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLFMDQYNYGGIPARADESLDD 1687
             GKFDLSAAK YC+SLL  + +R++F+ I LEPVH+WHSLLFMDQ+NY GI A  DE    
Sbjct:  1799 GKFDLSAAKTYCESLLTVMGSRDIFKLILLEPVHYWHSLLFMDQHNYAGIRATGDEI--S 1856

Query:  1688 DSQVDIVSSWNIAEYLPKEIQDHFVLVVSEFMYIPWKHA-QKLAASRASLQEGSSCTPSI 1746
              ++V I   W++A +LP+ IQ  F+++V+ F++ PWK A +K   S  SL+  +     +
Sbjct:  1857 GNEVTIEPKWSVARHLPEYIQKDFIIIVATFIFGPWKFALEKKRGSAESLE--AEMVEYL 1914

Query:  1747 TVAAAENFESHIVQYVKGEISSY 1769
                    F S IV+ + G I S+
Sbjct:  1915 KEQIGTRFISMIVEKI-GNIRSH 1936

 Score = 599 (215.9 bits), Expect = 0., Sum P(5) = 0.
 Identities = 121/238 (50%), Positives = 160/238 (67%)

Query:  1750 AAENFESHIVQYVKGEISSYFTGKLLSIVRDAIHHMKKMN-NDQHNSPGVMQTAANIHKV 1808
             +AE+ E+ +V+Y+K +I + F   ++  + +   H+K +N +D   + G         K 
Sbjct:  1902 SAESLEAEMVEYLKEQIGTRFISMIVEKIGNIRSHIKDINVSDASWASG------QAPKG 1955

Query:  1809 DAPLEFIKHVCAAFALDQNVQHDVLVMRKNLLKYVRVREFAPEAEFRDPCPSFILPNVIC 1868
             D   EFI+ + A  ALDQNVQ DVLVMRK LLKY++V+E A EAEF DP PSFILPNV C
Sbjct:  1956 DYTFEFIQIITAVLALDQNVQQDVLVMRKILLKYIKVKECAAEAEFIDPGPSFILPNVAC 2015

Query:  1869 SYCNXXXXXXXXXXXXXXXQ-DWHCAMPQCGQPYDREVMENALLQIVRQRERLYHLQDLV 1927
             S C                + +W CA PQC + YD+E +E++++Q+VRQRER+Y LQDLV
Sbjct:  2016 SNCGAYRDLDFCRDSALLTEKEWSCADPQCVKIYDKEQIESSIIQMVRQRERMYQLQDLV 2075

Query:  1928 CIRCNQVKAAHLAEQCACAGSFRCKEDASDFRSKMQIFLNIANRQGFQLLQECTSWIL 1985
             C RCNQVKAAHL EQC C+GSFRCKE  SDF  +++IFL+IA RQ F+LL+EC SWIL
Sbjct:  2076 CNRCNQVKAAHLTEQCECSGSFRCKESGSDFHKRIEIFLDIAKRQKFRLLEECISWIL 2133

 Score = 491 (177.9 bits), Expect = 0., Sum P(5) = 0.
 Identities = 107/205 (52%), Positives = 134/205 (65%)

Query:  1209 KTVKTTDQVDSLRQQLEPSEVSDQQPSSQNAIDTENIDRIVDYKGWLELKKRKWKDNLDR 1268
             K V  + +VD  R   E  +     P   + I  +N+D+ VDY+GWLEL+KRKWK  L  
Sbjct:  1178 KPVARSFEVD--RNHSEGKQQESWDPEFHD-ISLQNVDKNVDYQGWLELEKRKWKMTLTN 1234

Query:  1269 RKKQKLGSLRASHQANGVSESLGDMINHKEAQRRTGVGSYFRRQETAMTRCHWQIIQLVP 1328
             +KK+     R S    G    L   IN K  + R GVGSYFRR E A+T  + QIIQLV 
Sbjct:  1235 KKKR-----RYSSSLFGFD--LEQNINKKVCKGRVGVGSYFRRPEEALTSSYLQIIQLVQ 1287

Query:  1329 SSQSGVFLAWVVVEGIMVRIPITVPRLFYLNSKDPIVEKFPGRRVNKTLPHGRRSFNLIE 1388
             S QSG F AWVVVEG+M++IP+T+PR+FY+NSK  I   F G+ +NK LPHG+  +NL+E
Sbjct:  1288 SPQSGQFFAWVVVEGLMLKIPLTIPRVFYINSKASIAGNFTGKCINKILPHGKPCYNLME 1347

Query:  1389 VMIDEDQFRKESKKLAALLADPEVE 1413
             V I EDQF KESKKLAALLADPE+E
Sbjct:  1348 VNIQEDQFIKESKKLAALLADPEIE 1372

 Score = 106 (42.4 bits), Expect = 0., Sum P(5) = 0.
 Identities = 18/40 (45%), Positives = 28/40 (70%)

Query:  1409 DPEVEVLGWQQNAAKIGMQRCAASSQWFNERISLARYAHI 1448
             D   + + WQ+ AAKI + RCA++ QW + RI+ +RYAH+
Sbjct:  1558 DNSYQPVSWQRPAAKIAVLRCASAIQWLDRRIAQSRYAHV 1597

 Score = 45 (20.9 bits), Expect = 1.9e-140, Sum P(5) = 1.9e-140
 Identities = 32/137 (23%), Positives = 60/137 (43%)

Query:  1060 ERAVP-VAIFETDAEIMKFYLRKWCKTSSDVGIRSIVDWSYY--KQRLSSAI-------- 1108
             E ++P V ++ + +     Y+  +C  S    + S+V  + Y  K+ LSSA+        
Sbjct:  1425 ENSIPLVYLYHSTSTGRAVYVL-YCHASK---LMSVVVVNPYGDKELLSSALERQFRDRC 1480

Query:  1109 QKIITIPAAMQKVSNPVPRVVHPDWLYKKVREKEDKFRQRKLVDIFSSLKKDDFLNKTCN 1168
             Q++   P +   +   V  V HP+   K +++   ++R+       + ++  DF      
Sbjct:  1481 QELSPEPFSWDGILFQVEYVDHPEAATKFLQKALCEYREENCGATVAVIECPDF------ 1534

Query:  1169 AETNLMDENVEDLEDFP 1185
                N   E V+ LEDFP
Sbjct:  1535 ---NTTKEGVKALEDFP 1548

 Score = 44 (20.5 bits), Expect = 0., Sum P(4) = 0.
 Identities = 14/60 (23%), Positives = 27/60 (45%)

Query:  1777 IVRDAIHHMKKMN-NDQHNSPGVMQTAANIHKVDAPLEFIKHVCAAFALDQNVQHDVLVM 1835
             I+ + +H+   +   DQHN  G+  T   I   +  +E       A  L + +Q D +++
Sbjct:  1826 ILLEPVHYWHSLLFMDQHNYAGIRATGDEISGNEVTIE--PKWSVARHLPEYIQKDFIII 1883

 Score = 41 (19.5 bits), Expect = 0., Sum P(4) = 0.
 Identities = 11/38 (28%), Positives = 19/38 (50%)

Query:  1895 PQCGQPYDREVMENALLQIVRQRERLYHLQDLVCIRCN 1932
             PQ GQ +   V+E  +L+I     R++++     I  N
Sbjct:  1289 PQSGQFFAWVVVEGLMLKIPLTIPRVFYINSKASIAGN 1326

 Score = 41 (19.5 bits), Expect = 0., Sum P(4) = 0.
 Identities = 11/43 (25%), Positives = 21/43 (48%)

Query:  1699 IAEYLPKEIQDHFVLVVSEFMYIPWKHAQKLAASRASLQEGSS 1741
             + EYL ++I   F+ ++ E +     H + +  S AS   G +
Sbjct:  1910 MVEYLKEQIGTRFISMIVEKIGNIRSHIKDINVSDASWASGQA 1952

 Score = 41 (19.5 bits), Expect = 1.9e-140, Sum P(5) = 1.9e-140
 Identities = 9/29 (31%), Positives = 18/29 (62%)

Query:   533 DPSAYEQLLNNLDRDLQYAIKVEGKMDLE 561
             DP  ++  L N+D+++ Y    +G ++LE
Sbjct:  1200 DPEFHDISLQNVDKNVDY----QGWLELE 1224

 Score = 40 (19.1 bits), Expect = 0., Sum P(4) = 0.
 Identities = 9/29 (31%), Positives = 14/29 (48%)

Query:  1504 SNQVNEMEGGGLFGFDQDMNSGPYNNELC 1532
             +N+        LFGFD + N    N ++C
Sbjct:  1233 TNKKKRRYSSSLFGFDLEQN---INKKVC 1258

 Score = 39 (18.8 bits), Expect = 0., Sum P(4) = 0.
 Identities = 9/22 (40%), Positives = 14/22 (63%)

Query:  1475 QPVLTYPGAYRKVSVE-LKIHH 1495
             Q V+T P A +KV+   L++ H
Sbjct:  1103 QKVITIPAAMQKVANPVLRVRH 1124


>UNIPROTKB|E7ETS8 [details] [associations]
            symbol:POLE "DNA polymerase" species:9606 "Homo sapiens"
            [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005634
            "nucleus" evidence=IEA] [GO:0008270 "zinc ion binding"
            evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0006260
            "DNA replication" evidence=IEA] [GO:0003887 "DNA-directed DNA
            polymerase activity" evidence=IEA] InterPro:IPR006133
            InterPro:IPR006134 InterPro:IPR006172 InterPro:IPR012337
            InterPro:IPR013697 Pfam:PF00136 Pfam:PF03104 Pfam:PF08490
            SMART:SM00486 GO:GO:0005634 GO:GO:0000166 GO:GO:0003677
            GO:GO:0006260 GO:GO:0008270 SUPFAM:SSF53098 EMBL:AC135586
            EMBL:AC136467 EMBL:AC127070 GO:GO:0003887 OMA:QEESQDL
            HGNC:HGNC:9177 ChiTaRS:POLE EMBL:AC131212 IPI:IPI01019102
            ProteinModelPortal:E7ETS8 Ensembl:ENST00000455752
            ArrayExpress:E7ETS8 Bgee:E7ETS8 Uniprot:E7ETS8
        Length = 2297

 Score = 3450 (1219.5 bits), Expect = 0., Sum P(5) = 0.
 Identities = 692/1310 (52%), Positives = 915/1310 (69%)

Query:    17 QKLIRSA-EEELEAKLGYDLFSEGDKRLGWLLTFASSSLEDEDTRKVYSCIDLYFVSQDG 75
             ++L RS   ++++ + G++   E  ++ GWL+    + + DED R + S +D YF+  DG
Sbjct:    44 KRLERSQWTDKMDLRFGFERLKEPGEKTGWLINMHPTEILDEDKR-LGSAVDYYFIQDDG 102

Query:    76 STFKSKYKFRPYFYAATKEKMEMDVEAYLRRRYESQIADIEILEKEDLDLKNHLSGLHKS 135
             S FK    ++PYFY AT++  E +V ++L ++++ +IA +E + KEDLDL NHL GL ++
Sbjct:   103 SRFKVALPYKPYFYIATRKGCEREVSSFLSKKFQGKIAKVETVPKEDLDLPNHLVGLKRN 162

Query:   136 YLKISFDTVQQLMDVKKDLLHVVERNQAKFDAAEAYESIL----------TGKRE--QRP 183
             Y+++SF TV+ L+ V+K++   V++N+ +  A++AY ++L          T + E  ++ 
Sbjct:   163 YIRLSFHTVEDLVKVRKEISPAVKKNREQDHASDAYTALLSSVLQRGGVITDEEETSKKI 222

Query:   184 QDFLDCIVDLREYDVPYHIRFAIDNDVRCGQWYDVSISSTG-PL-LEKRVDLLQRAEVHV 241
              D LD IVD+REYDVPYHIR +ID  +    WY+V       P+ + +R DL++R +  V
Sbjct:   223 ADQLDNIVDMREYDVPYHIRLSIDLKIHVAHWYNVRYRGNAFPVEITRRDDLVERPDPVV 282

Query:   242 CAFDIETTKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGY 301
              AFDIETTKLPLKFPDA+ D IMMISYM+DGQGYLI NRE V EDIED E+TPKPE+EG 
Sbjct:   283 LAFDIETTKLPLKFPDAETDQIMMISYMIDGQGYLITNREIVSEDIEDFEFTPKPEYEGP 342

Query:   302 FKVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQC 361
             F V N  +E  L++ WF H+QE KP I VTYNGD+FDWPF+E RAA HG  M +E+GFQ 
Sbjct:   343 FCVFNEPDEAHLIQRWFEHVQETKPTIMVTYNGDFFDWPFVEARAAVHGLSMQQEIGFQK 402

Query:   362 DKNQGECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKE 421
             D +QGE +A    H+DC  WVKRDSYLP GS  LKA  KAKLGYDP+E++PEDM R A E
Sbjct:   403 D-SQGEYKAPQCIHMDCLRWVKRDSYLPVGSHNLKAAAKAKLGYDPVELDPEDMCRMATE 461

Query:   422 KPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAY 481
             +PQ +A+YSVSDAVATYYLYM YVHPFIF+L TIIPM PDEVLRKGSGTLCE LLMVQA+
Sbjct:   462 QPQTLATYSVSDAVATYYLYMKYVHPFIFALCTIIPMEPDEVLRKGSGTLCEALLMVQAF 521

Query:   482 KANVICPNKHQSDPEKFYRN-HLLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQL 540
              AN+I PNK + +  K   + H+L+SETY+GGHVE LESGVFRSD+P  F+++P+A++ L
Sbjct:   522 HANIIFPNKQEQEFNKLTDDGHVLDSETYVGGHVEALESGVFRSDIPCRFRMNPAAFDFL 581

Query:   541 LNNLDRDLQYAIKVEGKMDLESVSNYDEVKNAIMEKLLRLQEEPIREECPLIYHLDVAAM 600
             L  +++ L++A++ E K+ +E V+N++EV + I  KL  L++ P R ECPLIYHLDV AM
Sbjct:   582 LQRVEKTLRHALEEEEKVPVEQVTNFEEVCDEIKSKLASLKDVPSRIECPLIYHLDVGAM 641

Query:   601 YPNIILTNRLQPPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYYHLKKQI 660
             YPNIILTNRLQP ++V +  C ACDFN+PG  C RK+ W WRGE     RS+Y+ ++ Q+
Sbjct:   642 YPNIILTNRLQPSAMVDEATCAACDFNKPGANCQRKMAWQWRGEFMPASRSEYHRIQHQL 701

Query:   661 ESE-----FVDGTNGHLSKSFLDLPKMEQQSRLKDRLKKYCQKAYKRVLDKPVTELREAG 715
             ESE     F +G     +++F +L + EQ    K RL  YC+KAYK++    V E R   
Sbjct:   702 ESEKFPPLFPEGP----ARAFHELSREEQAKYEKRRLADYCRKAYKKIHITKVEE-RLTT 756

Query:   716 ICMRENSFYVDTVRSFRDRRYEYKGLNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQ 775
             IC RENSFYVDTVR+FRDRRYE+KGL+KVWK KLS A   G++ +++  ++M VLYDSLQ
Sbjct:   757 ICQRENSFYVDTVRAFRDRRYEFKGLHKVWKKKLSAAVEVGDAAEVKRCKNMEVLYDSLQ 816

Query:   776 LAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIW 835
             LAHKCILNSFYGYVMRKGARWYSMEMAG+V +TGA II  AR LIE+IG+PLELDTDGIW
Sbjct:   817 LAHKCILNSFYGYVMRKGARWYSMEMAGIVCFTGANIITQARELIEQIGRPLELDTDGIW 876

Query:   836 CVLPGSFPENXXXXXXXXXX-XXXISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHS 894
             CVLP SFPEN              ISYP  MLN+ V    TNDQYQ L +P S TY T S
Sbjct:   877 CVLPNSFPENFVFKTTNVKKPKVTISYPGAMLNIMVKEGFTNDQYQELAEPSSLTYVTRS 936

Query:   895 ECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVF 954
             E SI FEVDGPY AMILPASKEEG  +KKRYAVFN+DG+LAELKGFE+KRRGEL+LIK+F
Sbjct:   937 ENSIFFEVDGPYLAMILPASKEEGKKLKKRYAVFNEDGSLAELKGFEVKRRGELQLIKIF 996

Query:   955 QAELFDKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLAD 1014
             Q+ +F+ FL GST+EE Y +VA VA+ WLD+L ++  ++ DSEL + ISE+ +MS+ L D
Sbjct:   997 QSSVFEAFLKGSTLEEVYGSVAKVADYWLDVLYSKAANMPDSELFELISENRSMSRKLED 1056

Query:  1015 YGEQKSCAVTTARRLSDFLGDTMVKDKGLRCQYIVACEPQGTPVSERAVPVAIFETDAEI 1074
             YGEQKS +++TA+RL++FLGD MVKD GL C+YI++ +P+G+PV+ERA+P+AIF+ +  +
Sbjct:  1057 YGEQKSTSISTAKRLAEFLGDQMVKDAGLSCRYIISRKPEGSPVTERAIPLAIFQAEPTV 1116

Query:  1075 MKFYLRKWCKTSS--DVGIRSIVDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPD 1132
              K +LRKW K+SS  D  IR+I+DW YY +RL SAIQKIITIPAA+Q+V NPVPRV HPD
Sbjct:  1117 RKHFLRKWLKSSSLQDFDIRAILDWDYYIERLGSAIQKIITIPAALQQVKNPVPRVKHPD 1176

Query:  1133 WLYKKVREKEDKFRQRKLVDIFSSLKKDDFLNKTCNAETNLMDENVEDLEDFPKKRRNSV 1192
             WL+KK+ EK D ++Q+K+ ++F+   +         A  +    +  D+EDF       V
Sbjct:  1177 WLHKKLLEKNDVYKQKKISELFTLEGRRQVT--MAEASEDSPRPSAPDMEDF-----GLV 1229

Query:  1193 NGPRPIVRCFEVNNEQKTVKTTDQVDSLRQQLEPSEVSDQQPSSQNAIDTENIDRIVDYK 1252
               P P      V  ++K V    Q +S  Q L P+    +      A+ T   + +V   
Sbjct:  1230 KLPHPAA---PVTVKRKRVLWESQEES--QDLTPTVPWQEILGQPPALGTSQEEWLV--- 1281

Query:  1253 GWLELKKRKW----KDNLDRRKKQKL----GSLRASHQANGVSESLGDMI 1294
              WL   K+KW    +  L RRK+Q+L    G LR     +G +  LG  +
Sbjct:  1282 -WLRFHKKKWQLQARQRLARRKRQRLESAEGVLRPGAIRDGPATGLGSFL 1330

 Score = 447 (162.4 bits), Expect = 0., Sum P(5) = 0.
 Identities = 96/265 (36%), Positives = 147/265 (55%)

Query:  1442 LARYAHILWISDDGVPDLGGTSEEDECFADEVHQPV---LTYPGAYRKVSVELKIHHLSV 1498
             L R+ H+LW+S    PDLGG   +D C   E        +   G Y  V VEL + +L+V
Sbjct:  1688 LQRHNHLLWLSPTARPDLGGKEADDNCLVMEFDDQATVEINSSGCYSTVCVELDLQNLAV 1747

Query:  1499 NALLKSNQVNEMEGGGLFG--FD-------QDM-NSGPYNNELCGFDETTSSAPAFRVVK 1548
             N +L+S+ VN+MEG    G  FD       +DM   G   +    +DET   +  FR++K
Sbjct:  1748 NTILQSHHVNDMEGADSMGISFDVIQQASLEDMITGGQAASAPASYDETALCSNTFRILK 1807

Query:  1549 QLIQRCLTDAVTSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEF 1608
              ++   + +     N++AD  + H YRWL SP S LHDP LHR LH +M+K+F  L+AEF
Sbjct:  1808 SMVVGWVKEITQYHNIYADNQVMHFYRWLRSPSSLLHDPALHRTLHNMMKKLFLQLIAEF 1867

Query:  1609 RKLGATIIFANFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLF 1668
             ++LG+++I+ANF+++I+ T K  +  A AY + +  ++ ++E F  + +     W  LL+
Sbjct:  1868 KRLGSSVIYANFNRIILCTKKRRVEDAIAYVEYITSSIHSKETFHSLTISFSRCWEFLLW 1927

Query:  1669 MDQYNYGGIPARADESLD---DDSQ 1690
             MD  NYGGI  +    +     DSQ
Sbjct:  1928 MDPSNYGGIKGKVSSRIHCGLQDSQ 1952

 Score = 357 (130.7 bits), Expect = 0., Sum P(5) = 0.
 Identities = 95/323 (29%), Positives = 159/323 (49%)

Query:  1682 DESLDDDSQVDIV-SSWNIAEYLPK--EIQDHFVLVVSEFMYIPWKHAQKLAASRASLQE 1738
             +E  ++ +  D++ ++WNI ++LP+    Q++F+++VS ++   + H  K    R++   
Sbjct:  1975 EEEAEESNVEDLLENNWNILQFLPQAASCQNYFLMIVSAYIVAVY-HCMKDGLRRSA--P 2031

Query:  1739 GSSCTPSITVAAAE-NFESH-IVQYVKGEIS---SYFTGKLLSIVRDAIHHMKKMNNDQH 1793
             GS  TP     A++ + E+   V  + G I+    Y   +L          ++K      
Sbjct:  2032 GS--TPVRRRGASQLSQEAEGAVGALPGMITFSQDYVANELTQSFFTITQKIQKKVTGSR 2089

Query:  1794 NSPGVMQ---TAANIHKV-DAP-LEFIKHVCAAFALDQNVQHDVLVMRKNLLKYVRVREF 1848
             NS  + +        H + + P LEFIK+VC   +LD N+ + V  + ++LL+ V V EF
Sbjct:  2090 NSTELSEMFPVLPGSHLLLNNPALEFIKYVCKVLSLDTNITNQVNKLNRDLLRLVDVGEF 2149

Query:  1849 APEAEFRDPCPSFILPNVICSYCNXXXXX-----XXXXXXXXXXQDWHCAMPQCGQPYDR 1903
             + EA+FRDPC S++LP VIC  CN                      W C+   C  PYD 
Sbjct:  2150 SEEAQFRDPCRSYVLPEVICRSCNFCRDLDLCKDSSFSEDGAVLPQWLCS--NCQAPYDS 2207

Query:  1904 EVMENALLQIVRQRERLYHLQDLVCIRCNQVKAAHLAEQCACAGSFRCKEDASDFRSKMQ 1963
               +E  L+++++++   + LQDLVC++C  VK   +   C+CAG F        F  ++ 
Sbjct:  2208 SAIEMTLVEVLQKKLMAFTLQDLVCLKCRGVKETSMPVYCSCAGDFALTIHTQVFMEQIG 2267

Query:  1964 IFLNIANRQGFQLLQECTSWILE 1986
             IF NIA   G   L E   W+L+
Sbjct:  2268 IFRNIAQHYGMSYLLETLEWLLQ 2290

 Score = 221 (82.9 bits), Expect = 0., Sum P(5) = 0.
 Identities = 65/215 (30%), Positives = 107/215 (49%)

Query:  1204 VNNEQKTVKTTDQVDSLRQQLEPSEVSDQQPSSQNAIDTENIDRIVDYKGWLELKKRKW- 1262
             V  ++K V    Q +S  Q L P+    +      A+ T   + +V    WL   K+KW 
Sbjct:  1238 VTVKRKRVLWESQEES--QDLTPTVPWQEILGQPPALGTSQEEWLV----WLRFHKKKWQ 1291

Query:  1263 ---KDNLDRRKKQKLGSLRASHQANGVSESLGDMINHKEAQRRTGVGSYFRRQETAMTRC 1319
                +  L RRK+Q+L S      A GV       I    A   TG+GS+ RR   ++   
Sbjct:  1292 LQARQRLARRKRQRLES------AEGVLRP--GAIRDGPA---TGLGSFLRRTARSILDL 1340

Query:  1320 HWQIIQLVPSSQSGVFLAWVVVEGIMVRIPITVPRLFYLNSKDPIVEKFPG-RRVNKTLP 1378
              WQI+Q+  +SQ+G+F  W +V   +  I +++PR+FY+N +    E+    R+VN+ LP
Sbjct:  1341 PWQIVQISETSQAGLFRLWALVGSDLHCIRLSIPRVFYVNQRVAKAEEGASYRKVNRVLP 1400

Query:  1379 HGRRSFNLIEVMIDEDQFRKESKKLAALLADPEVE 1413
                  +NL E  + ED +++   ++ A L+ P++E
Sbjct:  1401 RSNMVYNLYEYSVPEDMYQEHINEINAELSAPDIE 1435

 Score = 44 (20.5 bits), Expect = 0., Sum P(5) = 0.
 Identities = 9/35 (25%), Positives = 18/35 (51%)

Query:  1414 VLGWQQNAAKIGMQRCAASSQWFNERISLARYAHI 1448
             VL WQ++ A+  ++         ++   ++RY HI
Sbjct:  1632 VLDWQRHGARRMIRHYLNLDTCLSQAFEMSRYFHI 1666

 Score = 43 (20.2 bits), Expect = 9.2e-65, Sum P(5) = 9.2e-65
 Identities = 12/50 (24%), Positives = 24/50 (48%)

Query:   482 KANVICPNKHQSDPEKFYRNHLLESETYIGGHVECLESGVFRSDLPTSFK 531
             ++N++      S PE  Y+ H+ E    +      +E GV+ + +P  F+
Sbjct:  1401 RSNMVYNLYEYSVPEDMYQEHINEINAELSA--PDIE-GVYETQVPLLFR 1447

 Score = 41 (19.5 bits), Expect = 9.2e-65, Sum P(5) = 9.2e-65
 Identities = 16/60 (26%), Positives = 22/60 (36%)

Query:   768 VVLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPL 827
             + LY   Q AHK +   F     R          +  +   GA       LL+EK+G  L
Sbjct:  1498 IYLYHHAQ-AHKALFGIFIPSQRRASVFVLDTVRSNQMPSLGALYSAEHGLLLEKVGPEL 1556

 Score = 39 (18.8 bits), Expect = 0., Sum P(2) = 0.
 Identities = 14/74 (18%), Positives = 30/74 (40%)

Query:  1277 LRASHQANGVSESLGDMINHKEAQRRTGVGSYFRRQETA--MTRCHWQIIQLVPSSQSGV 1334
             L+ S +A G  +   +  N  + + R G       +     +   +W I+Q +P + S  
Sbjct:  1948 LQDSQKAGGAED---EQENEDDEEERDGEEEEEAEESNVEDLLENNWNILQFLPQAASCQ 2004

Query:  1335 FLAWVVVEGIMVRI 1348
                 ++V   +V +
Sbjct:  2005 NYFLMIVSAYIVAV 2018


>UNIPROTKB|Q07864 [details] [associations]
            symbol:POLE "DNA polymerase epsilon catalytic subunit A"
            species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
            [GO:0051539 "4 iron, 4 sulfur cluster binding" evidence=IEA]
            [GO:0000731 "DNA synthesis involved in DNA repair" evidence=IMP]
            [GO:0006260 "DNA replication" evidence=IMP] [GO:0003677 "DNA
            binding" evidence=IDA] [GO:0003682 "chromatin binding"
            evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0003887
            "DNA-directed DNA polymerase activity" evidence=IMP] [GO:0000082
            "G1/S transition of mitotic cell cycle" evidence=IMP;TAS]
            [GO:0006287 "base-excision repair, gap-filling" evidence=IDA]
            [GO:0006297 "nucleotide-excision repair, DNA gap filling"
            evidence=IMP;TAS] [GO:0008622 "epsilon DNA polymerase complex"
            evidence=IDA] [GO:0000084 "S phase of mitotic cell cycle"
            evidence=TAS] [GO:0000216 "M/G1 transition of mitotic cell cycle"
            evidence=TAS] [GO:0000278 "mitotic cell cycle" evidence=TAS]
            [GO:0000722 "telomere maintenance via recombination" evidence=TAS]
            [GO:0000723 "telomere maintenance" evidence=TAS] [GO:0005654
            "nucleoplasm" evidence=TAS] [GO:0006270 "DNA replication
            initiation" evidence=TAS] [GO:0006281 "DNA repair" evidence=TAS]
            [GO:0006283 "transcription-coupled nucleotide-excision repair"
            evidence=TAS] [GO:0006289 "nucleotide-excision repair"
            evidence=TAS] [GO:0032201 "telomere maintenance via
            semi-conservative replication" evidence=TAS] Reactome:REACT_216
            InterPro:IPR006133 InterPro:IPR006134 InterPro:IPR006172
            InterPro:IPR012337 InterPro:IPR013697 Pfam:PF00136 Pfam:PF03104
            Pfam:PF08490 SMART:SM00486 EMBL:L09561 Reactome:REACT_115566
            GO:GO:0005654 Reactome:REACT_21300 GO:GO:0000166 GO:GO:0046872
            GO:GO:0003677 GO:GO:0000082 GO:GO:0008270 GO:GO:0001701
            GO:GO:0003682 GO:GO:0051539 GO:GO:0006270 SUPFAM:SSF53098
            GO:GO:0000216 GO:GO:0000084 GO:GO:0000722 GO:GO:0000731
            Reactome:REACT_383 GO:GO:0006283 GO:GO:0008622 GO:GO:0003887
            GO:GO:0032201 GO:GO:0006297 eggNOG:COG0417 GO:GO:0006287 KO:K02324
            EMBL:S60080 EMBL:U49356 EMBL:AY273166 IPI:IPI00939602 PIR:G02434
            RefSeq:NP_006222.2 UniGene:Hs.524871 ProteinModelPortal:Q07864
            DIP:DIP-24243N IntAct:Q07864 STRING:Q07864 PhosphoSite:Q07864
            DMDM:116241339 PaxDb:Q07864 PRIDE:Q07864 DNASU:5426
            Ensembl:ENST00000320574 GeneID:5426 KEGG:hsa:5426 UCSC:uc001uks.1
            CTD:5426 GeneCards:GC12M133200 H-InvDB:HIX0022184 HGNC:HGNC:9177
            MIM:174762 neXtProt:NX_Q07864 PharmGKB:PA277 HOVERGEN:HBG051398
            InParanoid:Q07864 PhylomeDB:Q07864 ChiTaRS:POLE GenomeRNAi:5426
            NextBio:20993 ArrayExpress:Q07864 Bgee:Q07864 CleanEx:HS_POLE
            Genevestigator:Q07864 GermOnline:ENSG00000177084 Uniprot:Q07864
        Length = 2286

 Score = 3450 (1219.5 bits), Expect = 0., Sum P(5) = 0.
 Identities = 692/1310 (52%), Positives = 915/1310 (69%)

Query:    17 QKLIRSA-EEELEAKLGYDLFSEGDKRLGWLLTFASSSLEDEDTRKVYSCIDLYFVSQDG 75
             ++L RS   ++++ + G++   E  ++ GWL+    + + DED R + S +D YF+  DG
Sbjct:    33 KRLERSQWTDKMDLRFGFERLKEPGEKTGWLINMHPTEILDEDKR-LGSAVDYYFIQDDG 91

Query:    76 STFKSKYKFRPYFYAATKEKMEMDVEAYLRRRYESQIADIEILEKEDLDLKNHLSGLHKS 135
             S FK    ++PYFY AT++  E +V ++L ++++ +IA +E + KEDLDL NHL GL ++
Sbjct:    92 SRFKVALPYKPYFYIATRKGCEREVSSFLSKKFQGKIAKVETVPKEDLDLPNHLVGLKRN 151

Query:   136 YLKISFDTVQQLMDVKKDLLHVVERNQAKFDAAEAYESIL----------TGKRE--QRP 183
             Y+++SF TV+ L+ V+K++   V++N+ +  A++AY ++L          T + E  ++ 
Sbjct:   152 YIRLSFHTVEDLVKVRKEISPAVKKNREQDHASDAYTALLSSVLQRGGVITDEEETSKKI 211

Query:   184 QDFLDCIVDLREYDVPYHIRFAIDNDVRCGQWYDVSISSTG-PL-LEKRVDLLQRAEVHV 241
              D LD IVD+REYDVPYHIR +ID  +    WY+V       P+ + +R DL++R +  V
Sbjct:   212 ADQLDNIVDMREYDVPYHIRLSIDLKIHVAHWYNVRYRGNAFPVEITRRDDLVERPDPVV 271

Query:   242 CAFDIETTKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGY 301
              AFDIETTKLPLKFPDA+ D IMMISYM+DGQGYLI NRE V EDIED E+TPKPE+EG 
Sbjct:   272 LAFDIETTKLPLKFPDAETDQIMMISYMIDGQGYLITNREIVSEDIEDFEFTPKPEYEGP 331

Query:   302 FKVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQC 361
             F V N  +E  L++ WF H+QE KP I VTYNGD+FDWPF+E RAA HG  M +E+GFQ 
Sbjct:   332 FCVFNEPDEAHLIQRWFEHVQETKPTIMVTYNGDFFDWPFVEARAAVHGLSMQQEIGFQK 391

Query:   362 DKNQGECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKE 421
             D +QGE +A    H+DC  WVKRDSYLP GS  LKA  KAKLGYDP+E++PEDM R A E
Sbjct:   392 D-SQGEYKAPQCIHMDCLRWVKRDSYLPVGSHNLKAAAKAKLGYDPVELDPEDMCRMATE 450

Query:   422 KPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAY 481
             +PQ +A+YSVSDAVATYYLYM YVHPFIF+L TIIPM PDEVLRKGSGTLCE LLMVQA+
Sbjct:   451 QPQTLATYSVSDAVATYYLYMKYVHPFIFALCTIIPMEPDEVLRKGSGTLCEALLMVQAF 510

Query:   482 KANVICPNKHQSDPEKFYRN-HLLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQL 540
              AN+I PNK + +  K   + H+L+SETY+GGHVE LESGVFRSD+P  F+++P+A++ L
Sbjct:   511 HANIIFPNKQEQEFNKLTDDGHVLDSETYVGGHVEALESGVFRSDIPCRFRMNPAAFDFL 570

Query:   541 LNNLDRDLQYAIKVEGKMDLESVSNYDEVKNAIMEKLLRLQEEPIREECPLIYHLDVAAM 600
             L  +++ L++A++ E K+ +E V+N++EV + I  KL  L++ P R ECPLIYHLDV AM
Sbjct:   571 LQRVEKTLRHALEEEEKVPVEQVTNFEEVCDEIKSKLASLKDVPSRIECPLIYHLDVGAM 630

Query:   601 YPNIILTNRLQPPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYYHLKKQI 660
             YPNIILTNRLQP ++V +  C ACDFN+PG  C RK+ W WRGE     RS+Y+ ++ Q+
Sbjct:   631 YPNIILTNRLQPSAMVDEATCAACDFNKPGANCQRKMAWQWRGEFMPASRSEYHRIQHQL 690

Query:   661 ESE-----FVDGTNGHLSKSFLDLPKMEQQSRLKDRLKKYCQKAYKRVLDKPVTELREAG 715
             ESE     F +G     +++F +L + EQ    K RL  YC+KAYK++    V E R   
Sbjct:   691 ESEKFPPLFPEGP----ARAFHELSREEQAKYEKRRLADYCRKAYKKIHITKVEE-RLTT 745

Query:   716 ICMRENSFYVDTVRSFRDRRYEYKGLNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQ 775
             IC RENSFYVDTVR+FRDRRYE+KGL+KVWK KLS A   G++ +++  ++M VLYDSLQ
Sbjct:   746 ICQRENSFYVDTVRAFRDRRYEFKGLHKVWKKKLSAAVEVGDAAEVKRCKNMEVLYDSLQ 805

Query:   776 LAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIW 835
             LAHKCILNSFYGYVMRKGARWYSMEMAG+V +TGA II  AR LIE+IG+PLELDTDGIW
Sbjct:   806 LAHKCILNSFYGYVMRKGARWYSMEMAGIVCFTGANIITQARELIEQIGRPLELDTDGIW 865

Query:   836 CVLPGSFPENXXXXXXXXXX-XXXISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHS 894
             CVLP SFPEN              ISYP  MLN+ V    TNDQYQ L +P S TY T S
Sbjct:   866 CVLPNSFPENFVFKTTNVKKPKVTISYPGAMLNIMVKEGFTNDQYQELAEPSSLTYVTRS 925

Query:   895 ECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVF 954
             E SI FEVDGPY AMILPASKEEG  +KKRYAVFN+DG+LAELKGFE+KRRGEL+LIK+F
Sbjct:   926 ENSIFFEVDGPYLAMILPASKEEGKKLKKRYAVFNEDGSLAELKGFEVKRRGELQLIKIF 985

Query:   955 QAELFDKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLAD 1014
             Q+ +F+ FL GST+EE Y +VA VA+ WLD+L ++  ++ DSEL + ISE+ +MS+ L D
Sbjct:   986 QSSVFEAFLKGSTLEEVYGSVAKVADYWLDVLYSKAANMPDSELFELISENRSMSRKLED 1045

Query:  1015 YGEQKSCAVTTARRLSDFLGDTMVKDKGLRCQYIVACEPQGTPVSERAVPVAIFETDAEI 1074
             YGEQKS +++TA+RL++FLGD MVKD GL C+YI++ +P+G+PV+ERA+P+AIF+ +  +
Sbjct:  1046 YGEQKSTSISTAKRLAEFLGDQMVKDAGLSCRYIISRKPEGSPVTERAIPLAIFQAEPTV 1105

Query:  1075 MKFYLRKWCKTSS--DVGIRSIVDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPD 1132
              K +LRKW K+SS  D  IR+I+DW YY +RL SAIQKIITIPAA+Q+V NPVPRV HPD
Sbjct:  1106 RKHFLRKWLKSSSLQDFDIRAILDWDYYIERLGSAIQKIITIPAALQQVKNPVPRVKHPD 1165

Query:  1133 WLYKKVREKEDKFRQRKLVDIFSSLKKDDFLNKTCNAETNLMDENVEDLEDFPKKRRNSV 1192
             WL+KK+ EK D ++Q+K+ ++F+   +         A  +    +  D+EDF       V
Sbjct:  1166 WLHKKLLEKNDVYKQKKISELFTLEGRRQVT--MAEASEDSPRPSAPDMEDF-----GLV 1218

Query:  1193 NGPRPIVRCFEVNNEQKTVKTTDQVDSLRQQLEPSEVSDQQPSSQNAIDTENIDRIVDYK 1252
               P P      V  ++K V    Q +S  Q L P+    +      A+ T   + +V   
Sbjct:  1219 KLPHPAA---PVTVKRKRVLWESQEES--QDLTPTVPWQEILGQPPALGTSQEEWLV--- 1270

Query:  1253 GWLELKKRKW----KDNLDRRKKQKL----GSLRASHQANGVSESLGDMI 1294
              WL   K+KW    +  L RRK+Q+L    G LR     +G +  LG  +
Sbjct:  1271 -WLRFHKKKWQLQARQRLARRKRQRLESAEGVLRPGAIRDGPATGLGSFL 1319

 Score = 447 (162.4 bits), Expect = 0., Sum P(5) = 0.
 Identities = 96/265 (36%), Positives = 147/265 (55%)

Query:  1442 LARYAHILWISDDGVPDLGGTSEEDECFADEVHQPV---LTYPGAYRKVSVELKIHHLSV 1498
             L R+ H+LW+S    PDLGG   +D C   E        +   G Y  V VEL + +L+V
Sbjct:  1677 LQRHNHLLWLSPTARPDLGGKEADDNCLVMEFDDQATVEINSSGCYSTVCVELDLQNLAV 1736

Query:  1499 NALLKSNQVNEMEGGGLFG--FD-------QDM-NSGPYNNELCGFDETTSSAPAFRVVK 1548
             N +L+S+ VN+MEG    G  FD       +DM   G   +    +DET   +  FR++K
Sbjct:  1737 NTILQSHHVNDMEGADSMGISFDVIQQASLEDMITGGQAASAPASYDETALCSNTFRILK 1796

Query:  1549 QLIQRCLTDAVTSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEF 1608
              ++   + +     N++AD  + H YRWL SP S LHDP LHR LH +M+K+F  L+AEF
Sbjct:  1797 SMVVGWVKEITQYHNIYADNQVMHFYRWLRSPSSLLHDPALHRTLHNMMKKLFLQLIAEF 1856

Query:  1609 RKLGATIIFANFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLF 1668
             ++LG+++I+ANF+++I+ T K  +  A AY + +  ++ ++E F  + +     W  LL+
Sbjct:  1857 KRLGSSVIYANFNRIILCTKKRRVEDAIAYVEYITSSIHSKETFHSLTISFSRCWEFLLW 1916

Query:  1669 MDQYNYGGIPARADESLD---DDSQ 1690
             MD  NYGGI  +    +     DSQ
Sbjct:  1917 MDPSNYGGIKGKVSSRIHCGLQDSQ 1941

 Score = 357 (130.7 bits), Expect = 0., Sum P(5) = 0.
 Identities = 95/323 (29%), Positives = 159/323 (49%)

Query:  1682 DESLDDDSQVDIV-SSWNIAEYLPK--EIQDHFVLVVSEFMYIPWKHAQKLAASRASLQE 1738
             +E  ++ +  D++ ++WNI ++LP+    Q++F+++VS ++   + H  K    R++   
Sbjct:  1964 EEEAEESNVEDLLENNWNILQFLPQAASCQNYFLMIVSAYIVAVY-HCMKDGLRRSA--P 2020

Query:  1739 GSSCTPSITVAAAE-NFESH-IVQYVKGEIS---SYFTGKLLSIVRDAIHHMKKMNNDQH 1793
             GS  TP     A++ + E+   V  + G I+    Y   +L          ++K      
Sbjct:  2021 GS--TPVRRRGASQLSQEAEGAVGALPGMITFSQDYVANELTQSFFTITQKIQKKVTGSR 2078

Query:  1794 NSPGVMQ---TAANIHKV-DAP-LEFIKHVCAAFALDQNVQHDVLVMRKNLLKYVRVREF 1848
             NS  + +        H + + P LEFIK+VC   +LD N+ + V  + ++LL+ V V EF
Sbjct:  2079 NSTELSEMFPVLPGSHLLLNNPALEFIKYVCKVLSLDTNITNQVNKLNRDLLRLVDVGEF 2138

Query:  1849 APEAEFRDPCPSFILPNVICSYCNXXXXX-----XXXXXXXXXXQDWHCAMPQCGQPYDR 1903
             + EA+FRDPC S++LP VIC  CN                      W C+   C  PYD 
Sbjct:  2139 SEEAQFRDPCRSYVLPEVICRSCNFCRDLDLCKDSSFSEDGAVLPQWLCS--NCQAPYDS 2196

Query:  1904 EVMENALLQIVRQRERLYHLQDLVCIRCNQVKAAHLAEQCACAGSFRCKEDASDFRSKMQ 1963
               +E  L+++++++   + LQDLVC++C  VK   +   C+CAG F        F  ++ 
Sbjct:  2197 SAIEMTLVEVLQKKLMAFTLQDLVCLKCRGVKETSMPVYCSCAGDFALTIHTQVFMEQIG 2256

Query:  1964 IFLNIANRQGFQLLQECTSWILE 1986
             IF NIA   G   L E   W+L+
Sbjct:  2257 IFRNIAQHYGMSYLLETLEWLLQ 2279

 Score = 221 (82.9 bits), Expect = 0., Sum P(5) = 0.
 Identities = 65/215 (30%), Positives = 107/215 (49%)

Query:  1204 VNNEQKTVKTTDQVDSLRQQLEPSEVSDQQPSSQNAIDTENIDRIVDYKGWLELKKRKW- 1262
             V  ++K V    Q +S  Q L P+    +      A+ T   + +V    WL   K+KW 
Sbjct:  1227 VTVKRKRVLWESQEES--QDLTPTVPWQEILGQPPALGTSQEEWLV----WLRFHKKKWQ 1280

Query:  1263 ---KDNLDRRKKQKLGSLRASHQANGVSESLGDMINHKEAQRRTGVGSYFRRQETAMTRC 1319
                +  L RRK+Q+L S      A GV       I    A   TG+GS+ RR   ++   
Sbjct:  1281 LQARQRLARRKRQRLES------AEGVLRP--GAIRDGPA---TGLGSFLRRTARSILDL 1329

Query:  1320 HWQIIQLVPSSQSGVFLAWVVVEGIMVRIPITVPRLFYLNSKDPIVEKFPG-RRVNKTLP 1378
              WQI+Q+  +SQ+G+F  W +V   +  I +++PR+FY+N +    E+    R+VN+ LP
Sbjct:  1330 PWQIVQISETSQAGLFRLWALVGSDLHCIRLSIPRVFYVNQRVAKAEEGASYRKVNRVLP 1389

Query:  1379 HGRRSFNLIEVMIDEDQFRKESKKLAALLADPEVE 1413
                  +NL E  + ED +++   ++ A L+ P++E
Sbjct:  1390 RSNMVYNLYEYSVPEDMYQEHINEINAELSAPDIE 1424

 Score = 44 (20.5 bits), Expect = 0., Sum P(5) = 0.
 Identities = 9/35 (25%), Positives = 18/35 (51%)

Query:  1414 VLGWQQNAAKIGMQRCAASSQWFNERISLARYAHI 1448
             VL WQ++ A+  ++         ++   ++RY HI
Sbjct:  1621 VLDWQRHGARRMIRHYLNLDTCLSQAFEMSRYFHI 1655

 Score = 43 (20.2 bits), Expect = 8.9e-65, Sum P(5) = 8.9e-65
 Identities = 12/50 (24%), Positives = 24/50 (48%)

Query:   482 KANVICPNKHQSDPEKFYRNHLLESETYIGGHVECLESGVFRSDLPTSFK 531
             ++N++      S PE  Y+ H+ E    +      +E GV+ + +P  F+
Sbjct:  1390 RSNMVYNLYEYSVPEDMYQEHINEINAELSA--PDIE-GVYETQVPLLFR 1436

 Score = 41 (19.5 bits), Expect = 8.9e-65, Sum P(5) = 8.9e-65
 Identities = 16/60 (26%), Positives = 22/60 (36%)

Query:   768 VVLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPL 827
             + LY   Q AHK +   F     R          +  +   GA       LL+EK+G  L
Sbjct:  1487 IYLYHHAQ-AHKALFGIFIPSQRRASVFVLDTVRSNQMPSLGALYSAEHGLLLEKVGPEL 1545

 Score = 39 (18.8 bits), Expect = 0., Sum P(2) = 0.
 Identities = 14/74 (18%), Positives = 30/74 (40%)

Query:  1277 LRASHQANGVSESLGDMINHKEAQRRTGVGSYFRRQETA--MTRCHWQIIQLVPSSQSGV 1334
             L+ S +A G  +   +  N  + + R G       +     +   +W I+Q +P + S  
Sbjct:  1937 LQDSQKAGGAED---EQENEDDEEERDGEEEEEAEESNVEDLLENNWNILQFLPQAASCQ 1993

Query:  1335 FLAWVVVEGIMVRI 1348
                 ++V   +V +
Sbjct:  1994 NYFLMIVSAYIVAV 2007


>UNIPROTKB|E1C5P2 [details] [associations]
            symbol:POLE "DNA polymerase" species:9031 "Gallus gallus"
            [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0008270 "zinc
            ion binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
            [GO:0006260 "DNA replication" evidence=IEA] [GO:0003887
            "DNA-directed DNA polymerase activity" evidence=IEA] [GO:0000082
            "G1/S transition of mitotic cell cycle" evidence=IEA] [GO:0000731
            "DNA synthesis involved in DNA repair" evidence=IEA] [GO:0003682
            "chromatin binding" evidence=IEA] [GO:0006287 "base-excision
            repair, gap-filling" evidence=IEA] [GO:0006297 "nucleotide-excision
            repair, DNA gap filling" evidence=IEA] [GO:0008622 "epsilon DNA
            polymerase complex" evidence=IEA] InterPro:IPR006133
            InterPro:IPR006134 InterPro:IPR006172 InterPro:IPR012337
            InterPro:IPR013697 Pfam:PF00136 Pfam:PF03104 Pfam:PF08490
            SMART:SM00486 GO:GO:0005634 GO:GO:0000166 GO:GO:0003677
            GO:GO:0000082 GO:GO:0006260 GO:GO:0008270 GO:GO:0003682
            SUPFAM:SSF53098 GO:GO:0000731 GO:GO:0003887 GO:GO:0006297
            GO:GO:0006287 OMA:QEESQDL GeneTree:ENSGT00390000010194
            EMBL:AADN02043168 IPI:IPI00823413 Ensembl:ENSGALT00000012422
            ArrayExpress:E1C5P2 Uniprot:E1C5P2
        Length = 2284

 Score = 3449 (1219.2 bits), Expect = 0., Sum P(5) = 0.
 Identities = 689/1309 (52%), Positives = 913/1309 (69%)

Query:    17 QKLIRSAE-EELEAKLGYDLFSEGDKRLGWLLTFASSSLEDEDTRKVYSCIDLYFVSQDG 75
             ++L RS   ++L+A  G++  +E  +R GWL+    + + DED R V S +D YF+ +DG
Sbjct:    27 KRLERSQRTDQLDALFGFERPAEPCERTGWLINMHPTEVLDEDRRAV-SAVDYYFIQEDG 85

Query:    76 STFKSKYKFRPYFYAATKEKMEMDVEAYLRRRYESQIADIEILEKEDLDLKNHLSGLHKS 135
             S FK    +RPYFY AT++  E +V ++L ++++ +IA +E + KEDLDL NHL GL + 
Sbjct:    86 SRFKVALPYRPYFYVATQQGCEREVSSFLAKKFQGKIAKLETVPKEDLDLPNHLVGLKRH 145

Query:   136 YLKISFDTVQQLMDVKKDLLHVVERNQAKFDAAEAYESIL---------TGKRE---QRP 183
             YLK+SF TV +L+ V+K++   V +N+ +  A + Y S+L         T   E   ++ 
Sbjct:   146 YLKLSFSTVDELVKVRKEISPAVRKNRERDQANDVYTSMLSSALAGGSLTTSEEGASKKV 205

Query:   184 QDFLDCIVDLREYDVPYHIRFAIDNDVRCGQWYDVSI--SSTGPLLEKRVDLLQRAEVHV 241
              + +D IVD+REYDVPYH+R +ID  +    WY+V    S+  P + +R DL++R +  V
Sbjct:   206 TNQMDNIVDMREYDVPYHMRLSIDLKIHVAHWYNVRYRGSTFPPEITRRDDLVERPDPVV 265

Query:   242 CAFDIETTKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGY 301
              AFDIETTKLPLKFPD + D IMMISYM+DGQGYLI NRE V EDIED E+TPKPE+EG 
Sbjct:   266 LAFDIETTKLPLKFPDPETDQIMMISYMIDGQGYLITNREIVSEDIEDFEFTPKPEYEGP 325

Query:   302 FKVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQC 361
             F V N  +E  L++ WF H+QE KP I VTYNGD+FDWPF+E RAA HG  M +E+GFQ 
Sbjct:   326 FCVFNEPDEAHLIQRWFEHVQETKPTIIVTYNGDFFDWPFVEARAAAHGINMYQEIGFQK 385

Query:   362 DKNQGECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKE 421
             D +QGE +A    H+DC  WVKRDSYLP GS  LKA  KAKLGYDP+E++PE+M R A +
Sbjct:   386 D-SQGEYKASQCIHMDCLRWVKRDSYLPVGSHNLKAAAKAKLGYDPVELDPEEMCRMATD 444

Query:   422 KPQM-MASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQA 480
              PQ  +A+YSVSDAVATYY+YM YVHPFIF+L TIIPM PDEVLRKGSGTLCE LLMVQA
Sbjct:   445 LPQQTLATYSVSDAVATYYMYMKYVHPFIFALCTIIPMEPDEVLRKGSGTLCEALLMVQA 504

Query:   481 YKANVICPNKHQSDPEKFYRN-HLLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQ 539
             Y AN+I PNK + +  K   + H+L+SETY+GGHVE LESGVFRSD+P  FK++P+A++ 
Sbjct:   505 YHANIIFPNKQEQEFNKLTEDGHVLDSETYVGGHVEALESGVFRSDIPCRFKMNPAAFDY 564

Query:   540 LLNNLDRDLQYAIKVEGKMDLESVSNYDEVKNAIMEKLLRLQEEPIREECPLIYHLDVAA 599
             L+ N+++ L++AI+ E ++ L+ V+N+ EV + I  KL  L++ P R ECPLIYHLDV A
Sbjct:   565 LVQNVEKTLRHAIEEEERLPLDQVTNFQEVCDEIKVKLNSLKDVPNRIECPLIYHLDVGA 624

Query:   600 MYPNIILTNRLQPPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYYHLKKQ 659
             MYPNIILTNRLQP ++V +  C ACDFN+PG  C R++ W WRGE     RS+Y+ +++Q
Sbjct:   625 MYPNIILTNRLQPSAMVDEATCAACDFNKPGANCQRRMTWQWRGEFMSASRSEYHRIQQQ 684

Query:   660 IESE-FVDGTNGHLSKSFLDLPKMEQQSRLKDRLKKYCQKAYKRVLDKPVTELREAGICM 718
             +ESE F         ++F +L + EQ    K RL  YC+KAYK++    V E R   IC 
Sbjct:   685 LESEKFPPLYPDGAPRAFHELSREEQAKYEKKRLADYCRKAYKKIHVTKVEE-RVTTICQ 743

Query:   719 RENSFYVDTVRSFRDRRYEYKGLNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAH 778
             RENSFYVDTVR+FRDRRYE+KGL+KVWK KLS A  +G++ +++  ++M +LYDSLQLAH
Sbjct:   744 RENSFYVDTVRAFRDRRYEFKGLHKVWKKKLSAAMETGDASEVKRCKNMEILYDSLQLAH 803

Query:   779 KCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVL 838
             KCILNSFYGYVMRKGARWYSMEMAG+V +TGA II  AR LIE+IG+PLELDTDGIWCVL
Sbjct:   804 KCILNSFYGYVMRKGARWYSMEMAGIVCFTGANIITQARELIEQIGRPLELDTDGIWCVL 863

Query:   839 PGSFPENXXXXXXXXXX-XXXISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECS 897
             P SFPEN              ISYP  MLN+ V    TNDQYQ L DP S TY T SE S
Sbjct:   864 PNSFPENFVIKSTNAKKPKVTISYPGAMLNILVKEGFTNDQYQELQDPASLTYVTRSENS 923

Query:   898 IEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAE 957
             I FEVDGPY AMILPASKEEG  +KKRYAVFN+DG+LAELKGFE+KRRGEL+L+K+FQ+ 
Sbjct:   924 IFFEVDGPYLAMILPASKEEGKKLKKRYAVFNEDGSLAELKGFEVKRRGELQLVKIFQSS 983

Query:   958 LFDKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLADYGE 1017
             +F+ FL G+T+EE Y++VA VA+ WLD+L ++  ++ DSEL + ISE+ +MS+ L DYGE
Sbjct:   984 VFEAFLKGTTLEEVYASVAKVADYWLDVLYSKAANMPDSELFELISENRSMSRKLEDYGE 1043

Query:  1018 QKSCAVTTARRLSDFLGDTMVKDKGLRCQYIVACEPQGTPVSERAVPVAIFETDAEIMKF 1077
             QKS +++TA+RL++FLGD MVKD GL C++I++ +P+G+PV+ERA+P+AIF+ +  + K 
Sbjct:  1044 QKSTSISTAKRLAEFLGDQMVKDAGLSCRFIISKKPEGSPVTERAIPLAIFQAEPSVRKH 1103

Query:  1078 YLRKWCKTSS--DVGIRSIVDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLY 1135
             YLRKW K+ S  D  IR+I+DW YY +RL S IQKIITIPAA+Q+V NPVPRV HPDWL+
Sbjct:  1104 YLRKWLKSPSLQDFNIRAILDWDYYIERLGSTIQKIITIPAALQQVKNPVPRVRHPDWLH 1163

Query:  1136 KKVREKEDKFRQRKLVDIFSSLKKDDFLNKTCNAETNLMDENVEDLEDFPKKRRNSVNGP 1195
             KK+ EK D ++Q+K+ ++F+S  K   L      +       V D+EDF   +  S++  
Sbjct:  1164 KKLLEKNDVYKQKKINELFTSEGKRQVLAN--QPQEGTPSSQVGDIEDFGAAK--SLHPS 1219

Query:  1196 RPIVRCFEVNNEQKTVKTTDQVDSLRQQLEPSEVSDQQPSSQNAIDTENIDRIVDYKGWL 1255
              PI       N++K V T ++   + Q LE S+   +      ++ T   + +V    WL
Sbjct:  1220 VPIA------NKRKRVPTAEESQQMSQSLELSQSWREILGPPPSMGTTK-EELV---AWL 1269

Query:  1256 ELKKRKWK-DNLDRRKKQKLGSLRASHQANG-------VSESLGDMINH 1296
                ++KW+     RR++QK   L     A G       +S  LG  + H
Sbjct:  1270 RFHQKKWELQARQRRERQKRRRLEDGGTAAGGGVVRDALSRGLGSYLRH 1318

 Score = 430 (156.4 bits), Expect = 0., Sum P(5) = 0.
 Identities = 91/252 (36%), Positives = 145/252 (57%)

Query:  1442 LARYAHILWISDDGVPDLGGTSEEDECFA---DEVHQPVLTYPGAYRKVSVELKIHHLSV 1498
             L R+ H+LW+S    PDLGG   +D       DE     +  PG Y  V +EL I  L+V
Sbjct:  1674 LRRHNHLLWLSPTARPDLGGKEADDNRLVMEFDERASVEINNPGCYSTVCLELDIQSLAV 1733

Query:  1499 NALLKSNQVNEMEGGGLFG--FD-------QDMNSGPYNNEL-CGFDETTSSAPAFRVVK 1548
             N +L+S+ VN+MEG       FD       +DM +G     +   +DET   +  FR++K
Sbjct:  1734 NTVLQSHHVNDMEGCSSMSISFDVIQQASLEDMVTGNQAANIPASYDETALCSNTFRILK 1793

Query:  1549 QLIQRCLTDAVTSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEF 1608
              ++   + +     N++AD  + H YRWL SP S L+DP LHR LH +M+K+F  L+AEF
Sbjct:  1794 SMVVSWVKEITQYHNIYADNQVIHFYRWLRSPSSLLYDPALHRTLHNMMKKLFLQLVAEF 1853

Query:  1609 RKLGATIIFANFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLF 1668
             R+LG+++++ANF+++I+ T K  +  A +Y + ++ ++ ++E+F  + +     W  LL+
Sbjct:  1854 RRLGSSVVYANFNRIILCTKKRRIEDAISYMEYIINSIHSKEIFHSLTISFSRCWEFLLW 1913

Query:  1669 MDQYNYGGIPAR 1680
             MD  NYGGI  +
Sbjct:  1914 MDPANYGGIKGK 1925

 Score = 367 (134.2 bits), Expect = 0., Sum P(5) = 0.
 Identities = 95/325 (29%), Positives = 161/325 (49%)

Query:  1679 ARADESLDDDSQVD--IVSSWNIAEYLPK--EIQDHFVLVVSEFMYIPWKHAQKLAASR- 1733
             A  D+  + +S V+  + +SWNI ++LP+    Q++F+++VS ++   + H+ K    R 
Sbjct:  1958 AGEDDEEEGESNVEELLENSWNIVQFLPQAASCQNYFLMIVSAYIVAVY-HSMKEELRRN 2016

Query:  1734 --ASLQEGSSCTPSITVAAAENFESH--IVQYVKGEISSYFTGKLLSIVRDAIHHMKKMN 1789
                S       T  +T  A     +   ++ + +  +++  T    +I +      KKM+
Sbjct:  2017 APGSTPVKRRGTSQVTQEAQGETGAMPGMITFSQDYVANELTQSFFTITQKI---QKKMS 2073

Query:  1790 NDQHNS-PGVMQTA--ANIHKVDAP-LEFIKHVCAAFALDQNVQHDVLVMRKNLLKYVRV 1845
               +H + P  +      +   ++ P LEFIK+VC   +LD NV + V  +R++LL+ + V
Sbjct:  2074 GSRHTTEPSDLFPVLPGSYLPLNNPALEFIKYVCQVLSLDANVTNQVNKLRRDLLRLIEV 2133

Query:  1846 REFAPEAEFRDPCPSFILPNVICSYCNXXXXXX-----XXXXXXXXXQDWHCAMPQCGQP 1900
              EF+ EA+FRDPC S++LP VIC  CN                      W C+   C   
Sbjct:  2134 GEFSDEAQFRDPCRSYVLPEVICRNCNFCRDLDLCKDPALSQDGSLLPSWVCS--NCQAQ 2191

Query:  1901 YDREVMENALLQIVRQRERLYHLQDLVCIRCNQVKAAHLAEQCACAGSFRCKEDASDFRS 1960
             YD + +E AL++ ++++   + LQDLVC +C+ VK  H+   C+CAG F     +  F  
Sbjct:  2192 YDSDSIEMALVEALQKKLMAFMLQDLVCKKCHGVKDTHMPLYCSCAGDFALTISSQTFME 2251

Query:  1961 KMQIFLNIANRQGFQLLQECTSWIL 1985
              + +F NIA   G   L E   W+L
Sbjct:  2252 HITVFQNIARHYGMAHLLETIEWLL 2276

 Score = 226 (84.6 bits), Expect = 0., Sum P(5) = 0.
 Identities = 60/212 (28%), Positives = 109/212 (51%)

Query:  1204 VNNEQKTVKTTDQVDSLRQQLEPSEVSDQQPSSQNAIDTENIDRIVDYKGWLELKKRKWK 1263
             + N++K V T ++   + Q LE S+   +      ++ T   + +V    WL   ++KW+
Sbjct:  1222 IANKRKRVPTAEESQQMSQSLELSQSWREILGPPPSMGTTK-EELV---AWLRFHQKKWE 1277

Query:  1264 -DNLDRRKKQKLGSLRASHQANGVSESLGDMINHKEAQRRTGVGSYFRRQETAMTRCHWQ 1322
                  RR++QK   L     A G     G ++  ++A  R G+GSY R    ++    WQ
Sbjct:  1278 LQARQRRERQKRRRLEDGGTAAG-----GGVV--RDALSR-GLGSYLRHTARSILDLPWQ 1329

Query:  1323 IIQLVPSSQSGVFLAWVVVEGIMVRIPITVPRLFYLNSKDPIVEKFPG-RRVNKTLPHGR 1381
             I+Q+  +SQ G+F  W V+   +  I +++PR+FY+N +    E+    R+VN+ LP   
Sbjct:  1330 IVQIAETSQPGLFRLWAVIGSDLHCIKLSIPRVFYVNQRVAKPEEGAVYRKVNRILPRSN 1389

Query:  1382 RSFNLIEVMIDEDQFRKESKKLAALLADPEVE 1413
               +NL E  + ED +++   ++ A L+ P++E
Sbjct:  1390 LVYNLYEYSVPEDMYQEHINEINADLSAPDIE 1421

 Score = 50 (22.7 bits), Expect = 0., Sum P(5) = 0.
 Identities = 11/40 (27%), Positives = 20/40 (50%)

Query:  1409 DPEVEVLGWQQNAAKIGMQRCAASSQWFNERISLARYAHI 1448
             D    VL WQ++AA+  ++         ++   ++RY HI
Sbjct:  1613 DISYSVLDWQRHAARRMIRHYLNLDTCLSQAFEMSRYYHI 1652

 Score = 43 (20.2 bits), Expect = 3.0e-25, Sum P(3) = 3.0e-25
 Identities = 11/34 (32%), Positives = 19/34 (55%)

Query:   114 DIEILEKEDLDLKNHLSGLHK-SYLKISFDTVQQ 146
             DI+ L    +   +H++ +   S + ISFD +QQ
Sbjct:  1727 DIQSLAVNTVLQSHHVNDMEGCSSMSISFDVIQQ 1760

 Score = 39 (18.8 bits), Expect = 0., Sum P(3) = 0.
 Identities = 12/54 (22%), Positives = 22/54 (40%)

Query:  1199 VRCFEVNNEQKTVKTTDQVDSLRQQLEPSEVSDQQPSSQNAIDT-ENIDRIVDY 1251
             + C EV   + T K     +   ++ E +   D++    N  +  EN   IV +
Sbjct:  1930 IHCGEVREREDTSKKQAPEEGDSEEEEEAGEDDEEEGESNVEELLENSWNIVQF 1983

 Score = 37 (18.1 bits), Expect = 4.5e-65, Sum P(4) = 4.5e-65
 Identities = 11/46 (23%), Positives = 22/46 (47%)

Query:   482 KANVICPNKHQSDPEKFYRNHLLESETYIGGHVECLESGVFRSDLP 527
             ++N++      S PE  Y+ H+ E    +      +E GV+ + +P
Sbjct:  1387 RSNLVYNLYEYSVPEDMYQEHINEINADLSA--PDIE-GVYETQVP 1429


>MGI|MGI:1196391 [details] [associations]
            symbol:Pole "polymerase (DNA directed), epsilon"
            species:10090 "Mus musculus" [GO:0000082 "G1/S transition of
            mitotic cell cycle" evidence=ISO] [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0000731 "DNA synthesis involved in DNA repair"
            evidence=ISO] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0003677 "DNA binding" evidence=ISO] [GO:0003682 "chromatin
            binding" evidence=ISO] [GO:0003887 "DNA-directed DNA polymerase
            activity" evidence=ISO] [GO:0005634 "nucleus" evidence=ISO]
            [GO:0006139 "nucleobase-containing compound metabolic process"
            evidence=IEA] [GO:0006260 "DNA replication" evidence=ISO]
            [GO:0006281 "DNA repair" evidence=IEA] [GO:0006287 "base-excision
            repair, gap-filling" evidence=ISO] [GO:0006297 "nucleotide-excision
            repair, DNA gap filling" evidence=ISO] [GO:0006974 "response to DNA
            damage stimulus" evidence=IEA] [GO:0008270 "zinc ion binding"
            evidence=IEA] [GO:0008622 "epsilon DNA polymerase complex"
            evidence=ISO] [GO:0016740 "transferase activity" evidence=IEA]
            [GO:0016779 "nucleotidyltransferase activity" evidence=IEA]
            [GO:0046872 "metal ion binding" evidence=IEA] [GO:0051536
            "iron-sulfur cluster binding" evidence=IEA] [GO:0051539 "4 iron, 4
            sulfur cluster binding" evidence=IEA] InterPro:IPR006133
            InterPro:IPR006134 InterPro:IPR006172 InterPro:IPR012337
            InterPro:IPR013697 Pfam:PF00136 Pfam:PF03104 Pfam:PF08490
            SMART:SM00486 MGI:MGI:1196391 GO:GO:0000166 GO:GO:0046872
            GO:GO:0003677 GO:GO:0000082 GO:GO:0006260 GO:GO:0008270
            GO:GO:0001701 GO:GO:0003682 GO:GO:0051539 SUPFAM:SSF53098
            GO:GO:0000731 GO:GO:0008622 GO:GO:0003887 GO:GO:0006297
            eggNOG:COG0417 GO:GO:0006287 KO:K02324 OMA:QEESQDL CTD:5426
            HOVERGEN:HBG051398 EMBL:AF123502 EMBL:AF126398 EMBL:AF126377
            EMBL:AF126378 EMBL:AF126379 EMBL:AF126380 EMBL:AF126381
            EMBL:AF126382 EMBL:AF126383 EMBL:AF126384 EMBL:AF126385
            EMBL:AF126386 EMBL:AF126387 EMBL:AF126388 EMBL:AF126389
            EMBL:AF126390 EMBL:AF126391 EMBL:AF126392 EMBL:AF126393
            EMBL:AF126394 EMBL:AF126395 EMBL:AF126396 EMBL:AF126397
            EMBL:AC118260 EMBL:AC123699 IPI:IPI00338295 RefSeq:NP_035262.2
            UniGene:Mm.35061 ProteinModelPortal:Q9WVF7 STRING:Q9WVF7
            PhosphoSite:Q9WVF7 PaxDb:Q9WVF7 PRIDE:Q9WVF7
            Ensembl:ENSMUST00000007296 GeneID:18973 KEGG:mmu:18973
            GeneTree:ENSGT00390000010194 HOGENOM:HOG000196287 InParanoid:Q9WVF7
            OrthoDB:EOG40P45V NextBio:295328 Bgee:Q9WVF7 CleanEx:MM_POLE
            Genevestigator:Q9WVF7 GermOnline:ENSMUSG00000007080 Uniprot:Q9WVF7
        Length = 2283

 Score = 3425 (1210.7 bits), Expect = 0., Sum P(5) = 0.
 Identities = 692/1312 (52%), Positives = 907/1312 (69%)

Query:    17 QKLIRSA-EEELEAKLGYDLFSEGDKRLGWLLTFASSSLEDEDTRKVYSCIDLYFVSQDG 75
             ++L RS   ++++ + G++   E  +R GWL+    + + DED R V S +D YF+  DG
Sbjct:    33 KRLERSQWTDKMDLRFGFERLKEPGERTGWLINMHPTEILDEDKRLV-SAVDYYFIQDDG 91

Query:    76 STFKSKYKFRPYFYAATKEKMEMDVEAYLRRRYESQIADIEILEKEDLDLKNHLSGLHKS 135
             S FK    + PYFY A ++  + +V ++L ++++ +IA +E + KEDLDL NHL GL +S
Sbjct:    92 SRFKVALPYMPYFYIAARKGCDREVSSFLSKKFQGKIAKLENVPKEDLDLPNHLVGLKRS 151

Query:   136 YLKISFDTVQQLMDVKKDLLHVVERNQAKFDAAEAY----ESILTG--------KREQRP 183
             Y+K+SF TV+ L+ V+K++   V++N+ +  A++ Y     SIL G        +  ++ 
Sbjct:   152 YIKLSFHTVEDLVKVRKEISPAVKKNREQDHASDEYTTMLSSILQGGSVITDEDETSKKI 211

Query:   184 QDFLDCIVDLREYDVPYHIRFAIDNDVRCGQWYDVSISSTG-PL-LEKRVDLLQRAEVHV 241
              D LD IVD+REYDVPYHIR +ID  +    WY+V       P+ + +R DL++R +  V
Sbjct:   212 ADQLDNIVDMREYDVPYHIRLSIDLRIHVAHWYNVRFRGNAFPVEITRRDDLVERPDPVV 271

Query:   242 CAFDIETTKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGY 301
              AFDIETTKLPLKFPDA+ D IMMISYM+DGQGYLI NRE V EDIED E+TPKPE+EG 
Sbjct:   272 LAFDIETTKLPLKFPDAETDQIMMISYMIDGQGYLITNREIVSEDIEDFEFTPKPEYEGP 331

Query:   302 FKVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQC 361
             F V N  +E+ L++ WF H+QE KP I VTYNGD+FDWPF+E RAA HG  M +E+GFQ 
Sbjct:   332 FCVFNEPDEVHLIQRWFEHIQETKPTIMVTYNGDFFDWPFVEARAAIHGLSMYQEIGFQK 391

Query:   362 DKNQGECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKE 421
             D +QGE +A    H+DC  WVKRDSYLP GS  LKA  KAKLGYDP+E++PEDM R A E
Sbjct:   392 D-SQGEYKAPQCIHMDCLRWVKRDSYLPVGSHNLKAAAKAKLGYDPVELDPEDMCRMATE 450

Query:   422 KPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAY 481
             +PQ +A+YSVSDAVATYYLYM YVHPFIF+L TIIPM PDEVLRKGSGTLCE LLMVQA+
Sbjct:   451 QPQTLATYSVSDAVATYYLYMKYVHPFIFALCTIIPMEPDEVLRKGSGTLCEALLMVQAF 510

Query:   482 KANVICPNKHQSDPEKFYRN-HLLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQL 540
              AN+I PNK + +  K   + H+L++ETY+GGHVE LESGVFRSD+P  F+++P+A++ L
Sbjct:   511 HANIIFPNKQEQEFNKLTDDGHMLDAETYVGGHVEALESGVFRSDIPCRFRMNPAAFDFL 570

Query:   541 LNNLDRDLQYAIKVEGKMDLESVSNYDEVKNAIMEKLLRLQEEPIREECPLIYHLDVAAM 600
             L  +++ +++AI+ E K+ +E  +N+ EV   I  KL  L++ P R ECPLIYHLDV AM
Sbjct:   571 LQRVEKTMRHAIEEEEKVPVEQATNFQEVCEQIKTKLTSLKDVPNRIECPLIYHLDVGAM 630

Query:   601 YPNIILTNRLQPPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYYHLKKQI 660
             YPNIILTNRLQP +IV +  C ACDFN+PG +C RK+ W WRGE     RS+Y+ ++ Q+
Sbjct:   631 YPNIILTNRLQPSAIVDEATCAACDFNKPGASCQRKMAWQWRGEFMPASRSEYHRIQHQL 690

Query:   661 ESE-----FVDGTNGHLSKSFLDLPKMEQQSRLKDRLKKYCQKAYKRVLDKPVTELREAG 715
             ESE     F +G     +++F +L + EQ    K RL  YC+KAYK++    V E R   
Sbjct:   691 ESEKFPPLFPEGP----ARAFHELSREEQAKYEKRRLADYCRKAYKKIHVTKVEE-RLTT 745

Query:   716 ICMRENSFYVDTVRSFRDRRYEYKGLNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQ 775
             IC RENSFYVDTVR+FRDRRYE+KGL+KVWK KLS A   G++ +++  ++M +LYDSLQ
Sbjct:   746 ICQRENSFYVDTVRAFRDRRYEFKGLHKVWKKKLSAAVEVGDASEVKRCKNMEILYDSLQ 805

Query:   776 LAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIW 835
             LAHKCILNSFYGYVMRKGARWYSMEMAG+V +TGA II  AR LIE+IG+PLELDTDGIW
Sbjct:   806 LAHKCILNSFYGYVMRKGARWYSMEMAGIVCFTGANIITQARELIEQIGRPLELDTDGIW 865

Query:   836 CVLPGSFPENXXXXXXXXXX-XXXISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHS 894
             CVLP SFPEN              ISYP  MLN+ V    TN QYQ L +P S TY THS
Sbjct:   866 CVLPNSFPENFVIKTTNAKKPKLTISYPGAMLNIMVKEGFTNHQYQELTEPSSLTYVTHS 925

Query:   895 ECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVF 954
             E SI FEVDGPY AMILPASKEEG  +KKRYAVFN+DG+LAELKGFE+KRRGEL+LIK+F
Sbjct:   926 ENSIFFEVDGPYLAMILPASKEEGKKLKKRYAVFNEDGSLAELKGFEVKRRGELQLIKIF 985

Query:   955 QAELFDKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLAD 1014
             Q+ +F+ FL GST+EE Y +VA VA+ WLD+L ++  ++ DSEL + ISE+ +MS+ L D
Sbjct:   986 QSSVFEAFLKGSTLEEVYGSVAKVADYWLDVLYSKAANMPDSELFELISENRSMSRKLED 1045

Query:  1015 YGEQKSCAVTTARRLSDFLGDTMVKDKGLRCQYIVACEPQGTPVSERAVPVAIFETDAEI 1074
             YGEQKS +++TA+RL++FLGD MVKD GL C+YI++ +P+G+PV+ERA+P+AIF+ +  +
Sbjct:  1046 YGEQKSTSISTAKRLAEFLGDQMVKDAGLSCRYIISRKPEGSPVTERAIPLAIFQAEPTV 1105

Query:  1075 MKFYLRKWCKTSS--DVGIRSIVDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPD 1132
              K +LRKW K+SS  D  IR+I+DW YY +RL SAIQKIITIPAA+Q+V NPVPRV HPD
Sbjct:  1106 RKHFLRKWLKSSSLQDFDIRTILDWDYYIERLGSAIQKIITIPAALQQVKNPVPRVKHPD 1165

Query:  1133 WLYKKVREKEDKFRQRKLVDIFSSLKKDDFLNKTCNAETNLMDENVEDLEDF--PKKRRN 1190
             WL+KK+ EK D ++Q+K+ ++F    K   +     A  N +     D+ED    K   +
Sbjct:  1166 WLHKKLLEKNDIYKQKKISELFVLEGKRQIV--MAQASENSLSLCTPDMEDIGLTKPHHS 1223

Query:  1191 SVNGPRPIVRCFEVNNEQKTVKTTDQVDSLRQQLEPSEVSDQQPSSQNAIDTENIDRIVD 1250
             +V       R +E   E + +  T         +   EV  Q PS    + T   + +V 
Sbjct:  1224 TVPVATKRKRVWETQKESQDIALT---------VPWQEVLGQPPS----LGTTQEEWLV- 1269

Query:  1251 YKGWLELKKRKWK----DNLDRRKKQKLGSL----RASHQANGVSESLGDMI 1294
                WL+  K+KW+      L  RKKQ+L S     R      G S  LG  +
Sbjct:  1270 ---WLQFHKKKWQLQAQQRLALRKKQRLESAEDMPRLGPIREGPSTGLGSFL 1318

 Score = 449 (163.1 bits), Expect = 0., Sum P(5) = 0.
 Identities = 94/257 (36%), Positives = 147/257 (57%)

Query:  1442 LARYAHILWISDDGVPDLGGTSEEDECFADEVHQPV---LTYPGAYRKVSVELKIHHLSV 1498
             L  + H+LW+S    PDLGG   +D     E        +   G Y  V VEL I +L+V
Sbjct:  1676 LQHHNHLLWLSPTSRPDLGGKEADDNRLVMEFDDRATVEINSSGCYSTVCVELDIQNLAV 1735

Query:  1499 NALLKSNQVNEMEGGGLFG--FD-------QDMNSGPYN-NELCGFDETTSSAPAFRVVK 1548
             N +L+S+ VN+MEG G  G  FD       +DM +G    + L  +DET   +  FR++K
Sbjct:  1736 NTILQSHHVNDMEGAGSMGISFDVIQQASLEDMVTGNQAASALANYDETALCSSTFRILK 1795

Query:  1549 QLIQRCLTDAVTSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEF 1608
              ++   + +     N++AD  + H YRWL SP S LHDP LHR LH +M+K+F  L+AEF
Sbjct:  1796 SMVVGWVKEITQYHNIYADNQVMHFYRWLQSPCSLLHDPALHRTLHNMMKKLFLQLIAEF 1855

Query:  1609 RKLGATIIFANFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLF 1668
             ++LG+++++ANF+++I+ T K  +  A AY + +  ++ ++E+F  + +     W  LL+
Sbjct:  1856 KRLGSSVVYANFNRIILCTKKRRIEDALAYVEYITNSIHSKEIFHSLTISFSRCWEFLLW 1915

Query:  1669 MDQYNYGGIPARADESL 1685
             MD  NYGGI  +   S+
Sbjct:  1916 MDPSNYGGIKGKVPSSI 1932

 Score = 370 (135.3 bits), Expect = 0., Sum P(5) = 0.
 Identities = 95/323 (29%), Positives = 163/323 (50%)

Query:  1682 DESLDDDSQVDIV-SSWNIAEYLPK--EIQDHFVLVVSEFM---YIPWKHAQKLAA--SR 1733
             +E + +    D++ ++WNI ++LP+    Q +F+++VS ++   Y   K   + +A  S 
Sbjct:  1961 EEGMGESEVEDLLENNWNILQFLPQAASCQSYFLMIVSAYIVAVYQSMKEELRHSAPGST 2020

Query:  1734 ASLQEGSSCTPSITVAAAENFESHIV---QYVKGEIS-SYFTGKLLSIVRDAIHHMKKMN 1789
                ++G+S     +  A  +    I     YV  E++ S+FT  +   ++  +   +   
Sbjct:  2021 PVKRKGASQFSQESEGATGSLPGMITFSQDYVANELTQSFFT--ITQKIQKKVTGSRNTT 2078

Query:  1790 NDQHNSPGVMQTAANIHKVDAPLEFIKHVCAAFALDQNVQHDVLVMRKNLLKYVRVREFA 1849
                   P V+   +++   +  LEFIK+VC   +LD N+ + V  + ++LL+ V V EF+
Sbjct:  2079 EPSEMFP-VLP-GSHLLLNNPALEFIKYVCKVLSLDTNITNQVNKLNRDLLRLVDVGEFS 2136

Query:  1850 PEAEFRDPCPSFILPNVICSYCNXXXXXXXXXXXXXXXQD------WHCAMPQCGQPYDR 1903
              EA+FRDPC S++LP VIC  CN               QD      W C+   C  PYD 
Sbjct:  2137 EEAQFRDPCHSYVLPEVICHSCNFCRDLDLCKDSSFS-QDGAILPQWLCS--NCQAPYDS 2193

Query:  1904 EVMENALLQIVRQRERLYHLQDLVCIRCNQVKAAHLAEQCACAGSFRCKEDASDFRSKMQ 1963
               +E+AL++ ++++   + LQDLVC++C  +K  H+   C+CAG F        F  +++
Sbjct:  2194 SAIESALVEALQRKLMAFTLQDLVCLKCRGMKETHMPVYCSCAGDFTLTIRTEVFMEQIR 2253

Query:  1964 IFLNIANRQGFQLLQECTSWILE 1986
             IF NIA       LQE   W+L+
Sbjct:  2254 IFQNIAKYYSMSYLQETIEWLLQ 2276

 Score = 210 (79.0 bits), Expect = 0., Sum P(5) = 0.
 Identities = 52/165 (31%), Positives = 88/165 (53%)

Query:  1254 WLELKKRKWK----DNLDRRKKQKLGSLRASHQANGVSESLGDMINHKEAQRRTGVGSYF 1309
             WL+  K+KW+      L  RKKQ+L S      A  +   LG +   +E    TG+GS+ 
Sbjct:  1270 WLQFHKKKWQLQAQQRLALRKKQRLES------AEDMPR-LGPI---REGPS-TGLGSFL 1318

Query:  1310 RRQETAMTRCHWQIIQLVPSSQSGVFLAWVVVEGIMVRIPITVPRLFYLNSKDPIVEKFP 1369
             RR   ++    WQIIQ+  + Q+G+F  W ++   +  I +++PR+FY+N +    E  P
Sbjct:  1319 RRTARSIMDLPWQIIQISETRQAGLFRLWAIIGNDLHCIKLSIPRVFYVNQRVAKAEDGP 1378

Query:  1370 G-RRVNKTLPHGRRSFNLIEVMIDEDQFRKESKKLAALLADPEVE 1413
               R+VN+ LP     +NL E  + ED +++   ++   L+ P++E
Sbjct:  1379 AYRKVNRALPRSNIVYNLYEYSVPEDMYQEHINEINTELSVPDIE 1423

 Score = 54 (24.1 bits), Expect = 2.2e-67, Sum P(5) = 2.2e-67
 Identities = 14/50 (28%), Positives = 26/50 (52%)

Query:   482 KANVICPNKHQSDPEKFYRNHLLESETYIGGHVECLESGVFRSDLPTSFK 531
             ++N++      S PE  Y+ H+ E  T +   V  +E GV+ + +P  F+
Sbjct:  1389 RSNIVYNLYEYSVPEDMYQEHINEINTELS--VPDIE-GVYETQVPLLFR 1435

 Score = 43 (20.2 bits), Expect = 0., Sum P(5) = 0.
 Identities = 9/35 (25%), Positives = 18/35 (51%)

Query:  1414 VLGWQQNAAKIGMQRCAASSQWFNERISLARYAHI 1448
             VL WQ++ A+  ++         ++   ++RY HI
Sbjct:  1620 VLDWQRHGARRMIRHYLNLDLCLSQAFEMSRYFHI 1654

 Score = 41 (19.5 bits), Expect = 2.2e-67, Sum P(5) = 2.2e-67
 Identities = 15/71 (21%), Positives = 34/71 (47%)

Query:    93 KEKMEMDVEAYLRRRYESQIADIEILEKEDLDLKNHLSGLHKSYLKISFDTVQQLMDVKK 152
             K+K ++  +  L  R + ++   E + +     +   +GL  S+L+    T + +MD+  
Sbjct:  1275 KKKWQLQAQQRLALRKKQRLESAEDMPRLGPIREGPSTGLG-SFLR---RTARSIMDLPW 1330

Query:   153 DLLHVVERNQA 163
              ++ + E  QA
Sbjct:  1331 QIIQISETRQA 1341

 Score = 37 (18.1 bits), Expect = 0., Sum P(2) = 0.
 Identities = 7/29 (24%), Positives = 15/29 (51%)

Query:  1320 HWQIIQLVPSSQSGVFLAWVVVEGIMVRI 1348
             +W I+Q +P + S      ++V   +V +
Sbjct:  1976 NWNILQFLPQAASCQSYFLMIVSAYIVAV 2004

 Score = 37 (18.1 bits), Expect = 0., Sum P(2) = 0.
 Identities = 11/39 (28%), Positives = 17/39 (43%)

Query:  1210 TVKTTDQVDSLRQQLEPSEVSDQQPSSQNAIDTENIDRI 1248
             T K   +V   R   EPSE+    P S   ++   ++ I
Sbjct:  2064 TQKIQKKVTGSRNTTEPSEMFPVLPGSHLLLNNPALEFI 2102

 Score = 37 (18.1 bits), Expect = 2.0e-25, Sum P(4) = 2.0e-25
 Identities = 10/32 (31%), Positives = 17/32 (53%)

Query:   993 IADSELIDYISESSTMSKSLADYGEQKSCAVT 1024
             I  + L D ++ +   S +LA+Y E   C+ T
Sbjct:  1760 IQQASLEDMVTGNQAAS-ALANYDETALCSST 1790


>ZFIN|ZDB-GENE-070705-557 [details] [associations]
            symbol:pole "polymerase (DNA directed), epsilon"
            species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0003887 "DNA-directed DNA polymerase activity"
            evidence=IEA] [GO:0006260 "DNA replication" evidence=IEA]
            [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0000166
            "nucleotide binding" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0006139
            "nucleobase-containing compound metabolic process" evidence=IEA]
            InterPro:IPR006133 InterPro:IPR006134 InterPro:IPR006172
            InterPro:IPR012337 InterPro:IPR013697 Pfam:PF00136 Pfam:PF03104
            Pfam:PF08490 SMART:SM00486 ZFIN:ZDB-GENE-070705-557 GO:GO:0005634
            GO:GO:0000166 GO:GO:0003677 GO:GO:0006260 GO:GO:0008270
            SUPFAM:SSF53098 GO:GO:0003887 KO:K02324 OMA:QEESQDL CTD:5426
            HOVERGEN:HBG051398 GeneTree:ENSGT00390000010194
            HOGENOM:HOG000196287 EMBL:CT737234 IPI:IPI00570166
            RefSeq:NP_001121995.1 UniGene:Dr.40806 Ensembl:ENSDART00000081411
            GeneID:553405 KEGG:dre:553405 NextBio:20880163 Uniprot:B0V351
        Length = 2284

 Score = 3424 (1210.4 bits), Expect = 0., Sum P(5) = 0.
 Identities = 675/1282 (52%), Positives = 907/1282 (70%)

Query:    17 QKLIRSA-EEELEAKLGYDLFSEGDKRLGWLLTFASSSLEDEDTRKVYSCIDLYFVSQDG 75
             ++L RS   + ++ + G++   E  ++ GWL+    + + D+D R + S +D YF+ +DG
Sbjct:    31 KRLERSQFTDSMDERFGFERMKEPGEKTGWLINMHPTEILDDDKRMI-SAVDYYFIQEDG 89

Query:    76 STFKSKYKFRPYFYAATKEKMEMDVEAYLRRRYESQIADIEILEKEDLDLKNHLSGLHKS 135
             + FK    ++PYFY ATK+  E +V ++L ++++ ++A +E + KEDLDL NHL GL ++
Sbjct:    90 NRFKVALPYKPYFYIATKKNTEREVISFLSKKFQGKVAKLESVPKEDLDLPNHLVGLKRN 149

Query:   136 YLKISFDTVQQLMDVKKDLLHVVERNQAKFDAAEAYESILT-------------GKREQR 182
             Y+K+SF+TV  L+ VK+++   V +N+ +  + +AY S+L+             G   ++
Sbjct:   150 YIKLSFNTVDDLIKVKREISPAVRKNREREKSNDAYTSMLSSALVGGSVVTEDEGGSSKK 209

Query:   183 PQDFLDCIVDLREYDVPYHIRFAIDNDVRCGQWYDVSI--SSTGPLLEKRVDLLQRAEVH 240
               + LD I+D+REYDVPYH+R +ID  +    WY+V    S+  P + +R DL++R +  
Sbjct:   210 MTEQLDNILDMREYDVPYHVRVSIDLKIHVAHWYNVRYRGSAYPPEIVRRDDLVERPDPV 269

Query:   241 VCAFDIETTKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEG 300
             V AFDIETTKLPLKFPDA+ D IMMISYM+DGQG+LI NRE V EDIED E+TPKPE+EG
Sbjct:   270 VLAFDIETTKLPLKFPDAETDQIMMISYMIDGQGFLITNREIVSEDIEDFEFTPKPEYEG 329

Query:   301 YFKVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQ 360
              F + N  +E  L++ WF H+ E KP I+VTYNGD+FDWPF+E RAA  G  M  E+GFQ
Sbjct:   330 PFTIFNEPDEASLIQRWFEHVHETKPNIFVTYNGDFFDWPFVEARAAQLGLSMHREIGFQ 389

Query:   361 CDKNQGECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAK 420
              D NQGE +A  A H+DC  WVKRDSYLP GS  LKA  KAKLGYDP+E++PE+M R A 
Sbjct:   390 KD-NQGEYKASQAIHMDCLRWVKRDSYLPVGSHNLKAAAKAKLGYDPVELDPEEMCRMAT 448

Query:   421 EKPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQA 480
             E+PQ +A+YSVSDAVATYYLYM YVHPFIF+L TIIPM PDEVLRKGSGTLCE LLMVQA
Sbjct:   449 EEPQTLATYSVSDAVATYYLYMKYVHPFIFALCTIIPMEPDEVLRKGSGTLCEALLMVQA 508

Query:   481 YKANVICPNKHQSDPEKFYRN-HLLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQ 539
             Y  N++ PNK +    K   + H+L+SETY+GGHVE LESGVFRSD+P  FK++P+A++ 
Sbjct:   509 YHVNIVFPNKQEQVFNKLTDDGHVLDSETYVGGHVEALESGVFRSDIPCRFKMNPAAFDF 568

Query:   540 LLNNLDRDLQYAIKVEGKMDLESVSNYDEVKNAIMEKLLRLQEEPIREECPLIYHLDVAA 599
             L+  ++R L++AI+ E K+ LE V+N++EV + I  KL+ L+E P R ECPLIYHLDV A
Sbjct:   569 LIQRVERTLRHAIEEEEKIPLEQVTNFNEVCDEIKRKLISLKEVPNRIECPLIYHLDVGA 628

Query:   600 MYPNIILTNRLQPPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYYHLKKQ 659
             MYPNIILTNRLQP ++V +  C ACDFN+PG  C R++ W WRGEI    RS+++ +++Q
Sbjct:   629 MYPNIILTNRLQPSAMVDEATCAACDFNKPGANCQRRMTWQWRGEIMPASRSEFHRIQQQ 688

Query:   660 IESEFVDGT--NGHLSKSFLDLPKMEQQSRLKDRLKKYCQKAYKRVLDKPVTELREAGIC 717
             +ESE       NG   ++F +L + EQ    K RL  YC+KAYK+V    + E R   IC
Sbjct:   689 LESEKFPPVFPNGP-PRAFHELNREEQARHEKKRLGDYCRKAYKKVHLTRLEE-RVTTIC 746

Query:   718 MRENSFYVDTVRSFRDRRYEYKGLNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLA 777
              RENSFYVDTVR+FRDRRYE+KGL+KVWK KLS A+ +G++ +++  ++M +LY+SLQLA
Sbjct:   747 QRENSFYVDTVRAFRDRRYEFKGLHKVWKKKLSTAQDNGDAAEVKRCKNMEILYESLQLA 806

Query:   778 HKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCV 837
             HKCILNSFYGYVMRKGARWYSMEMAG+V YTGA II  AR LIE+IG+PLELDTDGIWCV
Sbjct:   807 HKCILNSFYGYVMRKGARWYSMEMAGIVCYTGANIITQARELIEQIGRPLELDTDGIWCV 866

Query:   838 LPGSFPENXXXXXXXXXX-XXXISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSEC 896
             LP +FPEN              ISYP  MLN+ V    TN QYQ LVD  S TYET +E 
Sbjct:   867 LPNTFPENFVIKSTNEKKPKVTISYPGAMLNIMVKEGFTNHQYQELVDAASLTYETRAEN 926

Query:   897 SIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQA 956
             SI FEVDGPY AMILPASKEEG  +KKRYAVFN+DG+LAELKGFE+KRRGEL+LIK+FQ+
Sbjct:   927 SIFFEVDGPYLAMILPASKEEGKKLKKRYAVFNEDGSLAELKGFEVKRRGELQLIKIFQS 986

Query:   957 ELFDKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLADYG 1016
              +F+ FL G+T+EE Y++VA VA+ WLD+L ++  ++ D+EL + ISE+ +MS+ L DYG
Sbjct:   987 SVFEAFLKGTTLEEVYASVAKVADYWLDVLYSKAANMPDAELFELISENRSMSRKLEDYG 1046

Query:  1017 EQKSCAVTTARRLSDFLGDTMVKDKGLRCQYIVACEPQGTPVSERAVPVAIFETDAEIMK 1076
             EQKS +++TA+RL++FLGD MVKD GL C+Y+++ +P+G+PV+ERA+P+AIF+ +  + K
Sbjct:  1047 EQKSTSISTAKRLAEFLGDQMVKDAGLSCRYVISRKPEGSPVTERAIPLAIFQAEESVKK 1106

Query:  1077 FYLRKWCKTSS--DVGIRSIVDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDWL 1134
              +LRKW K  S  D+ IRSI+DWSYY +RL SAIQKIITIPAA+Q+V NPVPRV HPDWL
Sbjct:  1107 HFLRKWLKMPSLHDLDIRSILDWSYYIERLGSAIQKIITIPAALQQVKNPVPRVRHPDWL 1166

Query:  1135 YKKVREKEDKFRQRKLVDIFSSLKKDDFLNKTCNA-ETNLMDENVEDLEDFPKKRRNSVN 1193
             +KK+ EK D ++Q+K+ ++F+S  K     +T  A ET        D+ED    +R    
Sbjct:  1167 HKKLLEKNDIYKQKKISELFTSEGKRQVAQQTLAAGET-------PDMEDLAAPQR---- 1215

Query:  1194 GPRPIVRCFEVNNEQKTVKTTD--QVDSLRQQLEPSEVSDQQPSSQNAIDTENIDRIVDY 1251
                P+     ++ ++K +   +  Q ++  Q+L  S      P        E I  +V  
Sbjct:  1216 ---PVQPAILISTKRKRISQGEDSQTETQEQELTQSWREILGPPPAMGATREEI--LV-- 1268

Query:  1252 KGWLELKKRKWKDNLDRRKKQK 1273
               WL   K+KW+  L +RK+++
Sbjct:  1269 --WLRYHKKKWELQLRQRKERR 1288

 Score = 432 (157.1 bits), Expect = 0., Sum P(5) = 0.
 Identities = 94/257 (36%), Positives = 145/257 (56%)

Query:  1442 LARYAHILWISDDGVPDLGGTSEEDECF---ADEVHQPVLTYPGAYRKVSVELKIHHLSV 1498
             L ++ H+LW+S    PDLGG   +D      +DE     +   G Y  V VEL I  L+V
Sbjct:  1676 LRKHNHLLWLSPTARPDLGGKEADDSRLVMESDERGSMEINSQGCYSTVCVELDIQSLAV 1735

Query:  1499 NALLKSNQVNEMEGGGLFG--FD-------QDMNSGPYN-NELCGFDETTSSAPAFRVVK 1548
             N +L+S  VN+MEGG   G  FD       ++M SG    N +  +DET   +  FR++K
Sbjct:  1736 NTILQSQHVNDMEGGASIGVSFDVIQHASLEEMMSGNQGANAVASYDETALCSNTFRILK 1795

Query:  1549 QLIQRCLTDAVTSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEF 1608
              ++   + +     NV+AD  + H YRWL SP S L+DP LHR L  +M+K+F  L+AEF
Sbjct:  1796 SMVVGWVREITQYHNVYADNQVMHFYRWLRSPSSLLYDPALHRTLLNMMKKIFLQLVAEF 1855

Query:  1609 RKLGATIIFANFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLF 1668
             ++LG+++I+ NF+++I+ T K  +  A AY + +  ++ T+E+F  + +     W  LL+
Sbjct:  1856 KRLGSSVIYGNFNRLILCTKKRRIDDAIAYVEYITNSIHTKEIFHSLSITFSRCWEFLLW 1915

Query:  1669 MDQYNYGGIPARADESL 1685
             MD  N GG+  +   SL
Sbjct:  1916 MDPANCGGVKGKLPSSL 1932

 Score = 371 (135.7 bits), Expect = 0., Sum P(5) = 0.
 Identities = 93/324 (28%), Positives = 162/324 (50%)

Query:  1682 DESLDDDSQVD--IVSSWNIAEYLPK--EIQDHFVLVVSEFM---YIPWKHAQKLAASRA 1734
             DE  D +  V+  I S+WNI +YLP+    Q +F++++S ++   Y   +   +  A  A
Sbjct:  1965 DEEQDREEDVEDLIESNWNIMQYLPQTASCQKYFLMIISAYIAAVYHSMRQELRRNAPGA 2024

Query:  1735 S--LQEGS---SCTPSITVAAAENFESHIVQYVKGEIS-SYFTGKLLSIVRDAIHHMKKM 1788
             +   + G+   S  PS  V+A     +   +YV  E++ ++FT  +   ++  +   + +
Sbjct:  2025 TPIKRRGATQASQQPSGDVSALPGLITFSQEYVSSELTQNFFT--ITQKIQKKVSSTRSV 2082

Query:  1789 NNDQHNSPGVMQTAANIHKVDAPLEFIKHVCAAFALDQNVQHDVLVMRKNLLKYVRVREF 1848
                    P  +   +++   +  LEFIK+VC   +LD N+ + V  ++++LL+ V V EF
Sbjct:  2083 TLPSEMFP--VLPGSHLPLNNPALEFIKYVCQVLSLDANIVNQVNKLKRDLLRLVDVGEF 2140

Query:  1849 APEAEFRDPCPSFILPNVICSYCNXXXXXX-----XXXXXXXXXQDWHCAMPQCGQPYDR 1903
             + +A+FRDPC S++LP VIC +CN                      W C+   C   YD 
Sbjct:  2141 SEDAQFRDPCKSYVLPEVICHHCNFCRDLDLCKDPAVSQDGSVLPQWFCS--NCQAQYDT 2198

Query:  1904 EVMENALLQIVRQRERLYHLQDLVCIRCNQVKAAHLAEQCACAGSFRCKEDASDFRSKMQ 1963
             E +E AL++ ++++   Y LQD+ C +C  VK A++   C+CAG F        F  +++
Sbjct:  2199 ESIEMALVEALQKKLMSYTLQDVECAKCKGVKEANMPLYCSCAGDFNLTFTTKSFSEQVE 2258

Query:  1964 IFLNIANRQGFQLLQECTSWILEV 1987
             +F NIA       L E   WI+ +
Sbjct:  2259 VFRNIAAHYNMSFLLETIDWIISM 2282

 Score = 195 (73.7 bits), Expect = 0., Sum P(5) = 0.
 Identities = 54/221 (24%), Positives = 107/221 (48%)

Query:  1196 RPIVRCFEVNNEQKTVKTTD--QVDSLRQQLEPSEVSDQQPSSQNAIDTENIDRIVDYKG 1253
             RP+     ++ ++K +   +  Q ++  Q+L  S      P        E I  +V    
Sbjct:  1215 RPVQPAILISTKRKRISQGEDSQTETQEQELTQSWREILGPPPAMGATREEI--LV---- 1268

Query:  1254 WLELKKRKWKDNLDRRKKQKLGSLRASHQANGVSESLGDMINHKEAQRRTGVGSYFRRQE 1313
             WL   K+KW+  L +RK+++    +     +G S+  G  +        TG+GS+ RR  
Sbjct:  1269 WLRYHKKKWELQLRQRKERR----KRRRLIDGESQPTGGGVIR--GGPTTGLGSFLRRTA 1322

Query:  1314 TAMTRCHWQIIQLVPSSQSGVFLAWVVVEGIMVRIPITVPRLFYLNSKDPIVEKFPG-RR 1372
              ++    WQI+Q+  +S  G++  W V+   +  + + +PR+FY+N + P  E+    ++
Sbjct:  1323 RSILDMPWQIVQIAETSHPGLYKLWAVIGSDLHCMKLNIPRVFYVNQRVPKQEEAATCKK 1382

Query:  1373 VNKTLPHGRRSFNLIEVMIDEDQFRKESKKLAALLADPEVE 1413
             VN+ LP    +  L +  + ED +++   ++ A L+ P++E
Sbjct:  1383 VNRILPRSGVACFLYQYTVPEDMYQEHINEINADLSAPDIE 1423

 Score = 46 (21.3 bits), Expect = 0., Sum P(5) = 0.
 Identities = 9/35 (25%), Positives = 18/35 (51%)

Query:  1414 VLGWQQNAAKIGMQRCAASSQWFNERISLARYAHI 1448
             VL WQ++ A+  ++         ++   +ARY H+
Sbjct:  1620 VLDWQRHGARRMIKHYLNLDSCLSQAFDMARYYHL 1654

 Score = 43 (20.2 bits), Expect = 6.5e-66, Sum P(4) = 6.5e-66
 Identities = 17/80 (21%), Positives = 35/80 (43%)

Query:   103 YLRRRYESQIADIEILEKEDLDLKNHLSGLHKSYLKISFDTVQQLMDVKKDLLHVVERNQ 162
             ++  + ++ I  ++ +    +   N L G  ++ L     T ++L+  +K L  V   N 
Sbjct:  1502 FIPSQRKASIFVLDTVRSNQMPNLNSLYGAERTALLEK--TTEELLPPEKHLFEVRAEND 1559

Query:   163 AKFDAAEAYESILTGKREQR 182
              K     A + IL   +E+R
Sbjct:  1560 IKA-IYRALQRILLNYKEER 1578

 Score = 41 (19.5 bits), Expect = 1.0e-65, Sum P(4) = 1.0e-65
 Identities = 12/50 (24%), Positives = 23/50 (46%)

Query:   482 KANVICPNKHQSDPEKFYRNHLLESETYIGGHVECLESGVFRSDLPTSFK 531
             ++ V C     + PE  Y+ H+ E    +      +E GV+ + +P  F+
Sbjct:  1389 RSGVACFLYQYTVPEDMYQEHINEINADLSA--PDIE-GVYETQVPLLFR 1435

 Score = 41 (19.5 bits), Expect = 1.0e-65, Sum P(4) = 1.0e-65
 Identities = 12/55 (21%), Positives = 30/55 (54%)

Query:  1101 KQRLSSAIQKIITIPAAMQKVSNPVP---RVVHPDWLYKKVREKEDKFRQRKLVD 1152
             +Q L+ + ++I+  P AM      +    R     W  + +R+++++ ++R+L+D
Sbjct:  1242 EQELTQSWREILGPPPAMGATREEILVWLRYHKKKWELQ-LRQRKERRKRRRLID 1295

 Score = 41 (19.5 bits), Expect = 3.8e-27, Sum P(2) = 3.8e-27
 Identities = 13/38 (34%), Positives = 21/38 (55%)

Query:  1458 DLGGTSEEDECFADEVHQPVLTYPGAYR-KVSVELKIH 1494
             D GG+S++     D +   +  Y   Y  +VS++LKIH
Sbjct:   202 DEGGSSKKMTEQLDNILD-MREYDVPYHVRVSIDLKIH 238

 Score = 38 (18.4 bits), Expect = 1.5e-25, Sum P(3) = 1.5e-25
 Identities = 7/20 (35%), Positives = 12/20 (60%)

Query:   527 PTSFKLDPSAYEQLLNNLDR 546
             P+S   DP+ +  LLN + +
Sbjct:  1827 PSSLLYDPALHRTLLNMMKK 1846


>UNIPROTKB|E1BIF0 [details] [associations]
            symbol:POLE "DNA polymerase" species:9913 "Bos taurus"
            [GO:0008622 "epsilon DNA polymerase complex" evidence=IEA]
            [GO:0006297 "nucleotide-excision repair, DNA gap filling"
            evidence=IEA] [GO:0006287 "base-excision repair, gap-filling"
            evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
            [GO:0000731 "DNA synthesis involved in DNA repair" evidence=IEA]
            [GO:0000082 "G1/S transition of mitotic cell cycle" evidence=IEA]
            [GO:0003887 "DNA-directed DNA polymerase activity" evidence=IEA]
            [GO:0006260 "DNA replication" evidence=IEA] [GO:0003677 "DNA
            binding" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
            [GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR006133
            InterPro:IPR006134 InterPro:IPR006172 InterPro:IPR012337
            InterPro:IPR013697 Pfam:PF00136 Pfam:PF03104 Pfam:PF08490
            SMART:SM00486 GO:GO:0005634 GO:GO:0000166 GO:GO:0003677
            GO:GO:0000082 GO:GO:0006260 GO:GO:0008270 GO:GO:0003682
            SUPFAM:SSF53098 GO:GO:0000731 GO:GO:0003887 GO:GO:0006297
            GO:GO:0006287 OMA:QEESQDL GeneTree:ENSGT00390000010194
            EMBL:DAAA02044945 EMBL:DAAA02044946 IPI:IPI00711568
            Ensembl:ENSBTAT00000009882 Uniprot:E1BIF0
        Length = 2291

 Score = 3413 (1206.5 bits), Expect = 0., Sum P(5) = 0.
 Identities = 690/1307 (52%), Positives = 908/1307 (69%)

Query:    17 QKLIRSA-EEELEAKLGYDLFSEGDKRLGWLLTFASSSLEDEDTRKVYSCIDLYFVSQDG 75
             ++L RS   ++++ + G++   E  ++ GWL+    + + DED R V S +D YF+  DG
Sbjct:    33 KRLERSQWTDKMDLRFGFERLKEPGEKTGWLINMHPTEILDEDKRLV-SAVDYYFIQDDG 91

Query:    76 STFKSKYKFRPYFYAATKEKMEMDVEAYLRRRYESQIADIEILEKEDLDLKNHLSGLHKS 135
             S FK    ++PYFY AT++  E +V ++L ++++ +IA +E + KEDLDL NHL GL ++
Sbjct:    92 SRFKVALPYKPYFYIATRKGCEREVSSFLSKKFQGKIAKVETVPKEDLDLPNHLVGLKRN 151

Query:   136 YLKISFDTVQQLMDVKKDLLHVVERNQAKFDAAEAY----ESILTG--------KREQRP 183
             Y+K+SF+TV+ L+ V+K++   V++N+ +   ++AY     S+L G        +  ++ 
Sbjct:   152 YIKLSFNTVEDLVKVRKEISPAVKKNRDQSHTSDAYTTMLSSVLQGGSVIFDEEETSKKI 211

Query:   184 QDFLDCIVDLREYDVPYHIRFAIDNDVRCGQWYDVSI-SSTGPL-LEKRVDLLQRAEVHV 241
              D LD IVD+REYDVPYHIR +ID  +    WY+V    S  P+ + +R DL++R +  V
Sbjct:   212 ADQLDNIVDMREYDVPYHIRLSIDLKIHVAHWYNVRYRGSAFPVEIARRDDLVERPDPVV 271

Query:   242 CAFDIETTKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGY 301
              AFDIETTKLPLKFPDA+ D IMMISYM+DGQGYLI NRE V EDIED E+TPKPE+EG 
Sbjct:   272 LAFDIETTKLPLKFPDAETDQIMMISYMIDGQGYLITNREIVSEDIEDFEFTPKPEYEGP 331

Query:   302 FKVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQC 361
             F V N  +E+ L++ WF H+QE KP I VTYNGD+FDWPF+E RAA HG  M +E+GFQ 
Sbjct:   332 FCVFNEPDEVHLIQRWFEHIQEAKPTIMVTYNGDFFDWPFVEARAAVHGLSMYQEIGFQK 391

Query:   362 DKNQGECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKE 421
             D +QGE ++    H+DC  WVKRDSYLP GS  LKA  KAKLGYDP+E++PEDM R A E
Sbjct:   392 D-SQGEYKSPQCIHMDCLRWVKRDSYLPVGSHNLKAAAKAKLGYDPVELDPEDMCRMATE 450

Query:   422 KPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAY 481
             +PQ +A+YSVSDAVATYYLYM YVHPFIF+L TIIPM PDEVLRKGSGTLCE LLMVQA+
Sbjct:   451 QPQTLATYSVSDAVATYYLYMKYVHPFIFALCTIIPMEPDEVLRKGSGTLCEALLMVQAF 510

Query:   482 KANVICPNKHQSDPEKFYRN-HLLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQL 540
              AN+I PNK + +  K   + H+L++ETY+GGHVE LESGVFRSD+P  F+++P+A++ L
Sbjct:   511 HANIIFPNKQEQEFNKLTDDGHVLDAETYVGGHVEALESGVFRSDIPCRFRMNPAAFDFL 570

Query:   541 LNNLDRDLQYAIKVEGKMDLESVSNYDEVKNAIMEKLLRLQEEPIREECPLIYHLDVAAM 600
             L  +++ +++AI+ E K+ +E V N+ EV + I  KL  L++ P R ECPLIYHLDV AM
Sbjct:   571 LQRVEKTMRHAIEEEEKVPMEQVINFQEVCDQIKTKLTSLKDVPNRIECPLIYHLDVGAM 630

Query:   601 YPNIILTNRLQPPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYYHLKKQI 660
             YPNIILTNRLQP ++V +  C ACDFN+PG  C RK+ W WRGE     RS+Y+ ++ Q+
Sbjct:   631 YPNIILTNRLQPSAMVDEATCAACDFNKPGANCQRKMAWQWRGEFMPASRSEYHRIQHQL 690

Query:   661 ESE-FVDGTNGHLSKSFLDLPKMEQQSRLKDRLKKYCQKAYKRVLDKPVTELREAGICMR 719
             ESE F   T    +++F +L + EQ    K RL  YC+KAYK++    V E R   IC R
Sbjct:   691 ESEKFPPLTPEGPARAFHELSREEQAKYEKRRLADYCRKAYKKIHVTKVEE-RLTTICQR 749

Query:   720 ENSFYVDTVRSFRDRRYEYKGLNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHK 779
             ENSFYVDTVR+FRDRRYE+KGL+KVWK KLS A   G++ +++  ++M VLYDSLQLAHK
Sbjct:   750 ENSFYVDTVRAFRDRRYEFKGLHKVWKKKLSAAVEVGDAAEVKRCRNMEVLYDSLQLAHK 809

Query:   780 CILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLP 839
             CILNSFYGYVMRKGARWYSMEMAG+V +TGA II  AR LIE+IG+PLELDTDGIWCVLP
Sbjct:   810 CILNSFYGYVMRKGARWYSMEMAGIVCFTGANIITQARELIEQIGRPLELDTDGIWCVLP 869

Query:   840 GSFPENXXXXXXXXXX-XXXISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSI 898
              SFPEN              ISYP  MLN+ V    TNDQYQ L +P S TY T SE SI
Sbjct:   870 NSFPENFVIKTTNVKKPKVTISYPGAMLNIMVKEGFTNDQYQELAEPSSLTYVTRSENSI 929

Query:   899 EFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAEL 958
              FEVDGPY AMILPASKEEG  +KKRYAVFN+DG+LAELKGFE+KRRGEL+LIK+FQ+ +
Sbjct:   930 FFEVDGPYLAMILPASKEEGKKLKKRYAVFNEDGSLAELKGFEVKRRGELQLIKIFQSSV 989

Query:   959 FDKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLADYGEQ 1018
             F+ FL GST+EE Y +VA VA+ WLD+L ++  ++ DSEL + ISE+ +MS+ L DYGEQ
Sbjct:   990 FEAFLKGSTLEEVYGSVAKVADYWLDVLYSKAANMPDSELFELISENRSMSRKLEDYGEQ 1049

Query:  1019 KSCAVTTARRLSDFLGDTMVKDKGLRCQYIVACEPQGTPVSERAVPVAIFETDAEIMKFY 1078
             KS +++TA+RL++FLGD MVKD GL C+YI++ +P+G+PV+ERA+P+AIF+ +  + K +
Sbjct:  1050 KSTSISTAKRLAEFLGDQMVKDAGLSCRYIISRKPEGSPVTERAIPLAIFQAEPTVRKHF 1109

Query:  1079 LRKWCKTSS--DVGIRS--IVDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDWL 1134
             LRKW K+SS  D  IR+  I+DW YY +RL SAIQKIITIPAA+Q+V NPVPRV HPDWL
Sbjct:  1110 LRKWLKSSSLQDFDIRTAQILDWDYYIERLGSAIQKIITIPAALQQVKNPVPRVKHPDWL 1169

Query:  1135 YKKVREKEDKFRQRKLVDIFSSLKKDDFLNKTCNAETNLMDENVEDLEDFPKKRRNSVNG 1194
             +KK+ EK D ++Q+K+ ++F    K         A          D+EDF          
Sbjct:  1170 HKKLLEKNDVYKQKKISELFVLEGKRQV--GMAQASEGSQSLGSPDMEDF-----GLTKP 1222

Query:  1195 PRPIVRCFEVNNEQKTVKTTDQVDSLRQQLE-P-SEVSDQQPSSQNAIDTENIDRIVDYK 1252
             P   V    +  ++K +    Q  S   +L  P  EV  Q P    A+ T   + +V   
Sbjct:  1223 PHSAV---PIATKRKRIHCERQEGSQDLELTMPWQEVLGQPP----ALGTTQEEWLV--- 1272

Query:  1253 GWLELKKRKWK----DNLDRRKKQKL----GSLRASHQANGVSESLG 1291
              WL+  K+KW+      L  +K+++L    G+ R      G S  LG
Sbjct:  1273 -WLQFHKKKWQLQAQQRLAHKKRRRLEGAEGTPRPGAIREGPSTGLG 1318

 Score = 442 (160.7 bits), Expect = 0., Sum P(5) = 0.
 Identities = 100/281 (35%), Positives = 153/281 (54%)

Query:  1442 LARYAHILWISDDGVPDLGGTSEEDECFADEVHQ--PV-LTYPGAYRKVSVELKIHHLSV 1498
             L R+ H+LW+S    PDLGG   +D     E     PV +   G Y  V VEL I +L+V
Sbjct:  1679 LQRHNHLLWLSPTSRPDLGGKEADDNRLVMEFDDQAPVEINSSGCYSTVCVELDIQNLAV 1738

Query:  1499 NALLKSNQVNEMEGGGLFG--FD-------QDMNSGPYNNEL-CGFDETTSSAPAFRVVK 1548
             N +L+S+ VN+MEG    G  FD       +DM +G         +DET   +  FR++K
Sbjct:  1739 NTILQSHHVNDMEGADSIGISFDVIQQASLEDMITGNQAASAPASYDETALCSNTFRILK 1798

Query:  1549 QLIQRCLTDAVTSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEF 1608
              ++   + +     NV+AD  + H YRWL SP S LHDP LHR LH +M+K+F  L+AEF
Sbjct:  1799 SMVVGWVKEITQYRNVYADNQVMHFYRWLRSPSSLLHDPALHRTLHSMMKKLFLQLIAEF 1858

Query:  1609 RKLGATIIFANFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLF 1668
             ++LG+++++ANF+++I+ T K  +  A AY + +  ++ ++E+F  + +     W  LL+
Sbjct:  1859 KRLGSSVVYANFNRIILCTKKRRVEDALAYVEYITNSIHSKEIFHSLTISFSRCWEFLLW 1918

Query:  1669 MDQYNYGGIPARADESLDDDSQVDIVSSWNIAEYLPKEIQD 1709
             MD  NYGGI       +    Q D        +  P+E +D
Sbjct:  1919 MDPSNYGGIKGTVPSRIHCGQQ-DSPEEGRAQQGEPEEEED 1958

 Score = 344 (126.2 bits), Expect = 0., Sum P(5) = 0.
 Identities = 92/323 (28%), Positives = 161/323 (49%)

Query:  1683 ESLDDDSQVDIVSSWNIAEYLPK--EIQDHFVLVVSEFMYIPWKHAQKLAASRAS----- 1735
             + LD +  ++  ++WNI ++LP+    Q +F+++VS ++   + H+ K    R++     
Sbjct:  1973 QELDVEDLLE--NNWNILQFLPQAASCQSYFLMIVSAYIVAVY-HSMKEELRRSTPGSTP 2029

Query:  1736 -LQEGSSCTPSITVAAAENFESHIV---QYVKGEIS-SYFTGKLLSIVRDAIHHMKKMNN 1790
               + G+S         A      I     YV  E++ ++FT  +   ++  +   +  N+
Sbjct:  2030 VRRRGASQLSQEAQGEAGALPGMITFSQDYVANELTQNFFT--ITQKIQKKVTGSR--NS 2085

Query:  1791 DQHNSPGVMQTAANIHKVDAPLEFIKHVCAAFALDQNVQHDVLVMRKNLLKYVRVREFAP 1850
              + +    +   +++   +  LEFIK+VC   +LD N+ + V  + ++LL+ V V EF+ 
Sbjct:  2086 TELSEMFPVLPGSHLLLNNPALEFIKYVCKVLSLDTNITNQVNKLTRDLLRLVDVGEFSE 2145

Query:  1851 EAEFRDPCPSFILPNVICSYCNXXXXXX-----XXXXXXXXXQDWHCAMPQCGQPYDREV 1905
             EA+FRDPC S++LP VIC  CN                      W C+   C   YD  V
Sbjct:  2146 EAQFRDPCRSYVLPEVICHNCNFCRDLDLCKDPSFSQDGTVLPQWLCS--NCQVAYDSSV 2203

Query:  1906 MENALLQIVRQRERLYHLQDLVCIRCNQVKAAHLAEQCACAGSFRCKEDASDFRSKMQIF 1965
             +E AL++ ++++   + LQDLVC++C  VK  ++A  C+CAG F        F  ++ IF
Sbjct:  2204 IEMALVEALQKKLMAFTLQDLVCLKCRGVKETNMAVYCSCAGGFSLTIHTKVFMEQIGIF 2263

Query:  1966 LNIANRQGFQLLQECTSWILEVQ 1988
              NIA   G   L+E   W L++Q
Sbjct:  2264 QNIAQHYGMSYLKETLDW-LQLQ 2285

 Score = 221 (82.9 bits), Expect = 0., Sum P(5) = 0.
 Identities = 50/161 (31%), Positives = 84/161 (52%)

Query:  1254 WLELKKRKWKDNLDRRKKQKLGSLRASHQANGVSESLGDMINHKEAQRRTGVGSYFRRQE 1313
             WL+  K+KW+    +R   K    R    A G     G +   +E    TG+G +FRR  
Sbjct:  1273 WLQFHKKKWQLQAQQRLAHK--KRRRLEGAEGTPRP-GAI---REGPS-TGLGGFFRRTA 1325

Query:  1314 TAMTRCHWQIIQLVPSSQSGVFLAWVVVEGIMVRIPITVPRLFYLNSKDPIVEKFPG-RR 1372
              ++    WQI+Q+  +SQ+G+F  W V+   +  I + +PR+FY+N +    E+ P  R+
Sbjct:  1326 RSILDLPWQIVQISETSQAGLFRVWAVIGSDLHCIKLNIPRVFYVNQRVAKAEEGPSYRK 1385

Query:  1373 VNKTLPHGRRSFNLIEVMIDEDQFRKESKKLAALLADPEVE 1413
             VN+ LP     +NL E  + ED +++   ++   LA P++E
Sbjct:  1386 VNRVLPRSNMVYNLYEYSVPEDMYQEHINEINTELAAPDIE 1426

 Score = 48 (22.0 bits), Expect = 8.6e-65, Sum P(4) = 8.6e-65
 Identities = 13/50 (26%), Positives = 25/50 (50%)

Query:   482 KANVICPNKHQSDPEKFYRNHLLESETYIGGHVECLESGVFRSDLPTSFK 531
             ++N++      S PE  Y+ H+ E  T +      +E GV+ + +P  F+
Sbjct:  1392 RSNMVYNLYEYSVPEDMYQEHINEINTELAA--PDIE-GVYETQVPLVFR 1438

 Score = 47 (21.6 bits), Expect = 0., Sum P(5) = 0.
 Identities = 8/35 (22%), Positives = 19/35 (54%)

Query:  1414 VLGWQQNAAKIGMQRCAASSQWFNERISLARYAHI 1448
             VL WQ++ A+  ++       + ++   ++RY H+
Sbjct:  1623 VLDWQRHGARRMIRHYLNLDTYLSQAFEMSRYFHV 1657

 Score = 37 (18.1 bits), Expect = 0., Sum P(2) = 0.
 Identities = 7/29 (24%), Positives = 15/29 (51%)

Query:  1320 HWQIIQLVPSSQSGVFLAWVVVEGIMVRI 1348
             +W I+Q +P + S      ++V   +V +
Sbjct:  1984 NWNILQFLPQAASCQSYFLMIVSAYIVAV 2012


>UNIPROTKB|F1Q4D5 [details] [associations]
            symbol:POLE "DNA polymerase" species:9615 "Canis lupus
            familiaris" [GO:0008622 "epsilon DNA polymerase complex"
            evidence=IEA] [GO:0006297 "nucleotide-excision repair, DNA gap
            filling" evidence=IEA] [GO:0006287 "base-excision repair,
            gap-filling" evidence=IEA] [GO:0003682 "chromatin binding"
            evidence=IEA] [GO:0000731 "DNA synthesis involved in DNA repair"
            evidence=IEA] [GO:0000082 "G1/S transition of mitotic cell cycle"
            evidence=IEA] [GO:0003887 "DNA-directed DNA polymerase activity"
            evidence=IEA] [GO:0006260 "DNA replication" evidence=IEA]
            [GO:0003677 "DNA binding" evidence=IEA] [GO:0008270 "zinc ion
            binding" evidence=IEA] [GO:0000166 "nucleotide binding"
            evidence=IEA] InterPro:IPR006133 InterPro:IPR006134
            InterPro:IPR006172 InterPro:IPR012337 InterPro:IPR013697
            Pfam:PF00136 Pfam:PF03104 Pfam:PF08490 SMART:SM00486 GO:GO:0005634
            GO:GO:0000166 GO:GO:0003677 GO:GO:0000082 GO:GO:0006260
            GO:GO:0008270 GO:GO:0003682 SUPFAM:SSF53098 GO:GO:0000731
            GO:GO:0003887 GO:GO:0006297 GO:GO:0006287 OMA:QEESQDL
            GeneTree:ENSGT00390000010194 EMBL:AAEX03014576
            Ensembl:ENSCAFT00000010094 Uniprot:F1Q4D5
        Length = 2237

 Score = 3407 (1204.4 bits), Expect = 0., Sum P(5) = 0.
 Identities = 681/1281 (53%), Positives = 897/1281 (70%)

Query:    27 LEAKLGYDLFSEGDKRLGWLLTFASSSLEDEDTRKVYSCIDLYFVSQDGSTFKSKYKFRP 86
             ++ + G++   E  ++ GWL+    + + DED R V S +D YF+  DGS FK    + P
Sbjct:     1 MDLRFGFERLKESGEKTGWLINMHPTEILDEDKRLV-SAVDYYFIQDDGSRFKVALPYEP 59

Query:    87 YFYAATKEKMEMDVEAYLRRRYESQIADIEILEKEDLDLKNHLSGLHKSYLKISFDTVQQ 146
             YFY A ++  E +V ++L ++++ +IA IE + KEDLDL NHL GL ++Y+K+SF TV+ 
Sbjct:    60 YFYIAARKGCEREVSSFLSKKFQGRIAKIETVPKEDLDLPNHLVGLKRNYIKLSFHTVED 119

Query:   147 LMDVKKDLLHVVERNQAKFDAAEAY----ESILTG--------KREQRPQDFLDCIVDLR 194
             L+ V+KD+   V++N+ +  A +AY     S+L G        +  ++  D LD IVD+R
Sbjct:   120 LVRVRKDVSPAVKKNREQGHAGDAYTAMLSSVLQGGSVVIDEEEASKKVTDQLDNIVDMR 179

Query:   195 EYDVPYHIRFAIDNDVRCGQWYDVSI-SSTGPL-LEKRVDLLQRAEVHVCAFDIETTKLP 252
             EYDVPYHIR +ID  +    WY++    S  P+ + +R DL++R +  V AFDIETTKLP
Sbjct:   180 EYDVPYHIRLSIDLKIHVAHWYNIRYRGSAFPVEITRRDDLVERPDPVVLAFDIETTKLP 239

Query:   253 LKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNVNNEIE 312
             LKFPDA+ D IMMISYM+DGQGYLI NRE V ED+ED E+TPKPE+EG F V N  +E+ 
Sbjct:   240 LKFPDAETDQIMMISYMIDGQGYLITNREIVSEDVEDFEFTPKPEYEGPFCVFNEPDEVH 299

Query:   313 LLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDKNQGECRAKF 372
             L++ WF ++QE+KP I VTYNGD+FDWPF+E RAA HG  M +E+GFQ D +QGE +A  
Sbjct:   300 LIQRWFDYVQEMKPTIMVTYNGDFFDWPFVEARAAVHGLSMYQEIGFQKD-SQGEYKASQ 358

Query:   373 ACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQMMASYSVS 432
               H+DC  WVKRDSYLP GS  LKA  KAKLGYDP+E++PEDM R A E+PQ +A+YSVS
Sbjct:   359 CIHMDCLRWVKRDSYLPVGSHNLKAAAKAKLGYDPVELDPEDMCRMATEQPQTLATYSVS 418

Query:   433 DAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVICPNKHQ 492
             DAVATYYLYM YVHPFIF+L TIIPM PDEVLRKGSGTLCE LLMVQA+ AN+I PNK +
Sbjct:   419 DAVATYYLYMKYVHPFIFALCTIIPMEPDEVLRKGSGTLCEALLMVQAFHANIIFPNKQE 478

Query:   493 SDPEKFYRN-HLLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQLLNNLDRDLQYA 551
              +  K   + H+L++ETY+GGHVE LESGVFRSD+P  F+++P+A++ LL  +++ +++A
Sbjct:   479 QEFNKLTGDGHVLDAETYVGGHVEALESGVFRSDIPCRFRMNPAAFDFLLQRVEKTMRHA 538

Query:   552 IKVEGKMDLESVSNYDEVKNAIMEKLLRLQEEPIREECPLIYHLDVAAMYPNIILTNRLQ 611
             I+ E K+ +E V+N+ EV + I  KL  L++ P R ECPLIYHLDV AMYPNIILTNRLQ
Sbjct:   539 IEEEEKVPMEHVTNFQEVCDQIKTKLTSLKDVPNRIECPLIYHLDVGAMYPNIILTNRLQ 598

Query:   612 PPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYYHLKKQIESE-FVDGTNG 670
             P ++V +  C ACDFN+PG  C RK+ W WRGE     RS+Y+ ++ Q+ESE F   T  
Sbjct:   599 PSAVVDEATCAACDFNKPGANCQRKMAWQWRGEFMPASRSEYHRIQHQLESEKFPPLTAE 658

Query:   671 HLSKSFLDLPKMEQQSRLKDRLKKYCQKAYKRVLDKPVTELREAGICMRENSFYVDTVRS 730
               +++F +L + EQ    K RL  YC+KAYK++    V E R   IC RENSFYVDTVR+
Sbjct:   659 GPARAFHELSREEQAKYEKRRLSDYCRKAYKKIHVTRVEE-RLTTICQRENSFYVDTVRA 717

Query:   731 FRDRRYEYKGLNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHKCILNSFYGYVM 790
             FRDRRYE+KGL+KVWK KLS A   G++ +++  ++M VLYDSLQLAHKCILNSFYGYVM
Sbjct:   718 FRDRRYEFKGLHKVWKKKLSAAMEVGDAAEVKRCKNMEVLYDSLQLAHKCILNSFYGYVM 777

Query:   791 RKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLPGSFPENXXXXX 850
             R+GARWYSMEMAG+V +TGA II  AR LIE+IG+PLELDTDGIWCVLP SFPEN     
Sbjct:   778 RRGARWYSMEMAGIVCFTGANIITQARELIEQIGRPLELDTDGIWCVLPNSFPENFVIKT 837

Query:   851 XXXXX-XXXISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEFEVDGPYKAM 909
                      ISYP  MLN+ V    TNDQYQ L +P S TY T SE SI FEVDGPY AM
Sbjct:   838 TSVKKPKVTISYPGAMLNIMVKEGFTNDQYQELTEPSSLTYVTRSENSIFFEVDGPYLAM 897

Query:   910 ILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFLHGSTIE 969
             ILPASKEEG  +KKRYAVFN+DG+LAELKGFEIKRRGEL+LIK+FQ+ +F+ FL GST+E
Sbjct:   898 ILPASKEEGKKLKKRYAVFNEDGSLAELKGFEIKRRGELQLIKIFQSSVFEAFLKGSTLE 957

Query:   970 ECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLADYGEQKSCAVTTARRL 1029
             E Y +VA VA+ WLD+L ++  ++ DSEL + ISE+ +MS+ L DYGEQKS +++TA+RL
Sbjct:   958 EVYGSVAKVADYWLDVLYSKAANMPDSELFELISENRSMSRKLEDYGEQKSTSISTAKRL 1017

Query:  1030 SDFLGDTMVKDKGLRCQYIVACEPQGTPVSERAVPVAIFETDAEIMKFYLRKWCKTSS-- 1087
             ++FLGD MVKD GL C+YI++ +P+G+PV+ERA+P+AIF+ +  + K +LRKW K+SS  
Sbjct:  1018 AEFLGDQMVKDAGLSCRYIISRKPEGSPVTERAIPLAIFQAEPMVRKHFLRKWLKSSSLQ 1077

Query:  1088 DVGIRSIVDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLYKKVREKEDKFRQ 1147
             D  IR+I+DW YY +RL SAIQKIITIPAA+Q+V NPVPRV HPDWL+KK+ EK D  +Q
Sbjct:  1078 DFDIRTILDWEYYIERLGSAIQKIITIPAALQQVKNPVPRVKHPDWLHKKLLEKNDVCKQ 1137

Query:  1148 RKLVDIFS-SLKKDDFLNKTCNAETNLMDENVEDLEDFPKKRRNSVNGPRPIVRCFEVNN 1206
             +K+ ++F    ++   + +      +L      D+EDF   +        P+     +  
Sbjct:  1138 KKISELFVLEGRRQVGMAQVPEGTQSL---GAPDMEDFGLMK--------PLHLAVPIAT 1186

Query:  1207 EQKTVKTTDQVDSLRQQLE-P-SEVSDQQPSSQNAIDTENIDRIVDYKGWLELKKRKWKD 1264
             ++K V    Q +S   +L  P  E+  Q P    A+ T   + +V    WL   K+KW+ 
Sbjct:  1187 KRKRVLWESQEESHDLELTVPWQEILGQPP----ALGTTQEEWLV----WLRFHKKKWQ- 1237

Query:  1265 NLDRRKKQKLGSLRASHQANG 1285
              L  R++      R    A G
Sbjct:  1238 -LQARQRLACKKRRCVEVAEG 1257

 Score = 461 (167.3 bits), Expect = 0., Sum P(5) = 0.
 Identities = 98/265 (36%), Positives = 152/265 (57%)

Query:  1442 LARYAHILWISDDGVPDLGGTSEEDECFA---DEVHQPVLTYPGAYRKVSVELKIHHLSV 1498
             L R++H+LW+S    PDLGG   +D       D+     +  PG Y  V VEL I +L+V
Sbjct:  1634 LQRHSHLLWLSPTSRPDLGGKEADDNRLVMEFDDQASVEINCPGCYSTVCVELDIQNLAV 1693

Query:  1499 NALLKSNQVNEMEGGGLFG--FD-------QDMNSGPYNNEL-CGFDETTSSAPAFRVVK 1548
             N +L+S+ +N+MEG    G  FD       +DM +G         +DET   +  FR++K
Sbjct:  1694 NTILQSHHINDMEGADSMGISFDVIQQASLEDMITGNQAASTPASYDETALCSSTFRILK 1753

Query:  1549 QLIQRCLTDAVTSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEF 1608
              ++   + +     N++AD  + H YRWL SP S LHDPVLHR LH +M+K+F  L+AEF
Sbjct:  1754 SMVVGWVKEITQYRNIYADNQVMHFYRWLRSPSSLLHDPVLHRTLHNMMKKLFLQLIAEF 1813

Query:  1609 RKLGATIIFANFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLF 1668
             ++LG+++++ANF+++I+ T K  +  A AY + +  ++ ++E+F  + +     W  LL+
Sbjct:  1814 KRLGSSVVYANFNRIILCTKKRRIEDAIAYMEYITSSIHSKEIFHSLTISFSRCWEFLLW 1873

Query:  1669 MDQYNYGGIPARADESL---DDDSQ 1690
             MD  NYGGI   A  S+     DSQ
Sbjct:  1874 MDPSNYGGIKGNAPSSIHYGQQDSQ 1898

 Score = 352 (129.0 bits), Expect = 0., Sum P(5) = 0.
 Identities = 92/318 (28%), Positives = 157/318 (49%)

Query:  1686 DDDSQVDIVSSWNIAEYLPK--EIQDHFVLVVSEFMYIPWKHAQKLAASRASLQEGSSCT 1743
             + D +  + ++WNI ++LP+    Q +F+++VS ++   + H+ K    R S   G+   
Sbjct:  1921 EPDVEDMLENNWNIVQFLPQAASCQSYFLMIVSAYIVAVY-HSMK-EELRRSAPGGTPLR 1978

Query:  1744 ---PSITV--AAAENFESHIVQYVKGEISSYFTGKLLSIVRDAIHHMKKMNNDQHNSP-- 1796
                PS     AAA +    ++ + +  +++  T    +I +      KK+   + ++   
Sbjct:  1979 WRGPSQLSQDAAASSALPGMITFSQDYVANELTQNFFTITQKI---QKKVTGSRSSTELS 2035

Query:  1797 GVMQTAANIHKV--DAPLEFIKHVCAAFALDQNVQHDVLVMRKNLLKYVRVREFAPEAEF 1854
              +       H +  +  LEFIK+VC   +LD N+ + V  + ++LL+ V V EF+ EA+F
Sbjct:  2036 SMFPALPGSHLLLKNPALEFIKYVCKVLSLDTNITNQVNKLNRDLLRLVDVGEFSEEAQF 2095

Query:  1855 RDPCPSFILPNVICSYCNXXXXXXXXXXXXXXXQD------WHCAMPQCGQPYDREVMEN 1908
             RDPC S++LP VIC  CN               QD      W C+   C   YD  V+E 
Sbjct:  2096 RDPCRSYVLPEVICRSCNFCRDLDLCKEFAFS-QDGAVLPQWLCS--NCQVAYDTSVIEM 2152

Query:  1909 ALLQIVRQRERLYHLQDLVCIRCNQVKAAHLAEQCACAGSFRCKEDASDFRSKMQIFLNI 1968
             AL++ ++++   + LQDL+C++C  VK  ++   C+CAG F        F  ++ IF NI
Sbjct:  2153 ALVEALQKKLMAFTLQDLICLKCRGVKETNMPVYCSCAGGFTLTIHTKVFMEQIGIFQNI 2212

Query:  1969 ANRQGFQLLQECTSWILE 1986
             A   G   L E   W+L+
Sbjct:  2213 AQHYGMSYLTETLEWLLQ 2230

 Score = 224 (83.9 bits), Expect = 0., Sum P(5) = 0.
 Identities = 62/221 (28%), Positives = 108/221 (48%)

Query:  1196 RPIVRCFEVNNEQKTVKTTDQVDSLRQQLE-P-SEVSDQQPSSQNAIDTENIDRIVDYKG 1253
             +P+     +  ++K V    Q +S   +L  P  E+  Q P    A+ T   + +V    
Sbjct:  1176 KPLHLAVPIATKRKRVLWESQEESHDLELTVPWQEILGQPP----ALGTTQEEWLV---- 1227

Query:  1254 WLELKKRKWKDNLDRRKKQKLGSLRASHQANGVSESLGDMINHKEAQRRTGVGSYFRRQE 1313
             WL   K+KW+  L  R++      R    A G  E L   I  + A   TG+G + RR  
Sbjct:  1228 WLRFHKKKWQ--LQARQRLACKKRRCVEVAEG--EPLPGAIRERPA---TGLGGFLRRTA 1280

Query:  1314 TAMTRCHWQIIQLVPSSQSGVFLAWVVVEGIMVRIPITVPRLFYLNSKDPIVEKFPG-RR 1372
              ++    WQI+Q+  +SQ+G+F  W V+   +  I + +PR+FY+N +    E+ P  R+
Sbjct:  1281 RSILDLPWQIVQISETSQAGLFRLWAVISSDLYCIRLNIPRVFYVNQQVAKAEEGPSYRK 1340

Query:  1373 VNKTLPHGRRSFNLIEVMIDEDQFRKESKKLAALLADPEVE 1413
             V++ LP     +NL E  + ED +++   ++   L+ P++E
Sbjct:  1341 VSRVLPRSNMVYNLYEYSVPEDMYQEHINEINTELSAPDIE 1381

 Score = 48 (22.0 bits), Expect = 6.9e-67, Sum P(4) = 6.9e-67
 Identities = 13/50 (26%), Positives = 25/50 (50%)

Query:   482 KANVICPNKHQSDPEKFYRNHLLESETYIGGHVECLESGVFRSDLPTSFK 531
             ++N++      S PE  Y+ H+ E  T +      +E GV+ + +P  F+
Sbjct:  1347 RSNMVYNLYEYSVPEDMYQEHINEINTELSA--PDIE-GVYETQVPLLFR 1393

 Score = 44 (20.5 bits), Expect = 1.8e-25, Sum P(2) = 1.8e-25
 Identities = 16/64 (25%), Positives = 25/64 (39%)

Query:  1590 HRILHKVMQKVFAMLLAEFRKLGATIIFANFSKVIIDTGKFDLSAAKAYCDSLLKALQTR 1649
             HRI H++  + F  L AE    G    F   S+   +  K++      YC    K +   
Sbjct:   641 HRIQHQLESEKFPPLTAE----GPARAFHELSRE--EQAKYEKRRLSDYCRKAYKKIHVT 694

Query:  1650 ELFE 1653
              + E
Sbjct:   695 RVEE 698

 Score = 39 (18.8 bits), Expect = 0., Sum P(2) = 0.
 Identities = 9/22 (40%), Positives = 13/22 (59%)

Query:  1925 DLVCIRCNQVKAAHLAEQCACA 1946
             DL CIR N  +  ++ +Q A A
Sbjct:  1311 DLYCIRLNIPRVFYVNQQVAKA 1332

 Score = 39 (18.8 bits), Expect = 0., Sum P(2) = 0.
 Identities = 8/33 (24%), Positives = 16/33 (48%)

Query:  1316 MTRCHWQIIQLVPSSQSGVFLAWVVVEGIMVRI 1348
             M   +W I+Q +P + S      ++V   +V +
Sbjct:  1927 MLENNWNIVQFLPQAASCQSYFLMIVSAYIVAV 1959

 Score = 39 (18.8 bits), Expect = 0., Sum P(5) = 0.
 Identities = 9/35 (25%), Positives = 17/35 (48%)

Query:  1414 VLGWQQNAAKIGMQRCAASSQWFNERISLARYAHI 1448
             VL WQ+  A+  ++         ++   ++RY HI
Sbjct:  1578 VLDWQRLGARRMIRHYLNLDTSLSQAFEMSRYFHI 1612


>UNIPROTKB|F5H1D6 [details] [associations]
            symbol:POLE "DNA polymerase" species:9606 "Homo sapiens"
            [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005634
            "nucleus" evidence=IEA] [GO:0008270 "zinc ion binding"
            evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0006260
            "DNA replication" evidence=IEA] [GO:0003887 "DNA-directed DNA
            polymerase activity" evidence=IEA] InterPro:IPR006133
            InterPro:IPR006134 InterPro:IPR006172 InterPro:IPR012337
            InterPro:IPR013697 Pfam:PF00136 Pfam:PF03104 Pfam:PF08490
            SMART:SM00486 GO:GO:0005634 GO:GO:0000166 GO:GO:0003677
            GO:GO:0006260 GO:GO:0008270 SUPFAM:SSF53098 EMBL:AC135586
            EMBL:AC136467 EMBL:AC127070 GO:GO:0003887 HGNC:HGNC:9177
            ChiTaRS:POLE EMBL:AC131212 IPI:IPI00790334 Ensembl:ENST00000535270
            UCSC:uc009zyu.1 ArrayExpress:F5H1D6 Bgee:F5H1D6 Uniprot:F5H1D6
        Length = 2259

 Score = 3348 (1183.6 bits), Expect = 0., Sum P(5) = 0.
 Identities = 671/1242 (54%), Positives = 877/1242 (70%)

Query:    84 FRPYFYAATKEKMEMDVEAYLRRRYESQIADIEILEKEDLDLKNHLSGLHKSYLKISFDT 143
             ++PYFY AT++  E +V ++L ++++ +IA +E + KEDLDL NHL GL ++Y+++SF T
Sbjct:    73 YKPYFYIATRKGCEREVSSFLSKKFQGKIAKVETVPKEDLDLPNHLVGLKRNYIRLSFHT 132

Query:   144 VQQLMDVKKDLLHVVERNQAKFDAAEAYESIL----------TGKRE--QRPQDFLDCIV 191
             V+ L+ V+K++   V++N+ +  A++AY ++L          T + E  ++  D LD IV
Sbjct:   133 VEDLVKVRKEISPAVKKNREQDHASDAYTALLSSVLQRGGVITDEEETSKKIADQLDNIV 192

Query:   192 DLREYDVPYHIRFAIDNDVRCGQWYDVSISSTG-PL-LEKRVDLLQRAEVHVCAFDIETT 249
             D+REYDVPYHIR +ID  +    WY+V       P+ + +R DL++R +  V AFDIETT
Sbjct:   193 DMREYDVPYHIRLSIDLKIHVAHWYNVRYRGNAFPVEITRRDDLVERPDPVVLAFDIETT 252

Query:   250 KLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNVNN 309
             KLPLKFPDA+ D IMMISYM+DGQGYLI NRE V EDIED E+TPKPE+EG F V N  +
Sbjct:   253 KLPLKFPDAETDQIMMISYMIDGQGYLITNREIVSEDIEDFEFTPKPEYEGPFCVFNEPD 312

Query:   310 EIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDKNQGECR 369
             E  L++ WF H+QE KP I VTYNGD+FDWPF+E RAA HG  M +E+GFQ D +QGE +
Sbjct:   313 EAHLIQRWFEHVQETKPTIMVTYNGDFFDWPFVEARAAVHGLSMQQEIGFQKD-SQGEYK 371

Query:   370 AKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQMMASY 429
             A    H+DC  WVKRDSYLP GS  LKA  KAKLGYDP+E++PEDM R A E+PQ +A+Y
Sbjct:   372 APQCIHMDCLRWVKRDSYLPVGSHNLKAAAKAKLGYDPVELDPEDMCRMATEQPQTLATY 431

Query:   430 SVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVICPN 489
             SVSDAVATYYLYM YVHPFIF+L TIIPM PDEVLRKGSGTLCE LLMVQA+ AN+I PN
Sbjct:   432 SVSDAVATYYLYMKYVHPFIFALCTIIPMEPDEVLRKGSGTLCEALLMVQAFHANIIFPN 491

Query:   490 KHQSDPEKFYRN-HLLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQLLNNLDRDL 548
             K + +  K   + H+L+SETY+GGHVE LESGVFRSD+P  F+++P+A++ LL  +++ L
Sbjct:   492 KQEQEFNKLTDDGHVLDSETYVGGHVEALESGVFRSDIPCRFRMNPAAFDFLLQRVEKTL 551

Query:   549 QYAIKVEGKMDLESVSNYDEVKNAIMEKLLRLQEEPIREECPLIYHLDVAAMYPNIILTN 608
             ++A++ E K+ +E V+N++EV + I  KL  L++ P R ECPLIYHLDV AMYPNIILTN
Sbjct:   552 RHALEEEEKVPVEQVTNFEEVCDEIKSKLASLKDVPSRIECPLIYHLDVGAMYPNIILTN 611

Query:   609 RLQPPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYYHLKKQIESE----- 663
             RLQP ++V +  C ACDFN+PG  C RK+ W WRGE     RS+Y+ ++ Q+ESE     
Sbjct:   612 RLQPSAMVDEATCAACDFNKPGANCQRKMAWQWRGEFMPASRSEYHRIQHQLESEKFPPL 671

Query:   664 FVDGTNGHLSKSFLDLPKMEQQSRLKDRLKKYCQKAYKRVLDKPVTELREAGICMRENSF 723
             F +G     +++F +L + EQ    K RL  YC+KAYK++    V E R   IC RENSF
Sbjct:   672 FPEGP----ARAFHELSREEQAKYEKRRLADYCRKAYKKIHITKVEE-RLTTICQRENSF 726

Query:   724 YVDTVRSFRDRRYEYKGLNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHKCILN 783
             YVDTVR+FRDRRYE+KGL+KVWK KLS A   G++ +++  ++M VLYDSLQLAHKCILN
Sbjct:   727 YVDTVRAFRDRRYEFKGLHKVWKKKLSAAVEVGDAAEVKRCKNMEVLYDSLQLAHKCILN 786

Query:   784 SFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLPGSFP 843
             SFYGYVMRKGARWYSMEMAG+V +TGA II  AR LIE+IG+PLELDTDGIWCVLP SFP
Sbjct:   787 SFYGYVMRKGARWYSMEMAGIVCFTGANIITQARELIEQIGRPLELDTDGIWCVLPNSFP 846

Query:   844 ENXXXXXXXXXX-XXXISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEFEV 902
             EN              ISYP  MLN+ V    TNDQYQ L +P S TY T SE SI FEV
Sbjct:   847 ENFVFKTTNVKKPKVTISYPGAMLNIMVKEGFTNDQYQELAEPSSLTYVTRSENSIFFEV 906

Query:   903 DGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKF 962
             DGPY AMILPASKEEG  +KKRYAVFN+DG+LAELKGFE+KRRGEL+LIK+FQ+ +F+ F
Sbjct:   907 DGPYLAMILPASKEEGKKLKKRYAVFNEDGSLAELKGFEVKRRGELQLIKIFQSSVFEAF 966

Query:   963 LHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLADYGEQKSCA 1022
             L GST+EE Y +VA VA+ WLD+L ++  ++ DSEL + ISE+ +MS+ L DYGEQKS +
Sbjct:   967 LKGSTLEEVYGSVAKVADYWLDVLYSKAANMPDSELFELISENRSMSRKLEDYGEQKSTS 1026

Query:  1023 VTTARRLSDFLGDTMVKDKGLRCQYIVACEPQGTPVSERAVPVAIFETDAEIMKFYLRKW 1082
             ++TA+RL++FLGD MVKD GL C+YI++ +P+G+PV+ERA+P+AIF+ +  + K +LRKW
Sbjct:  1027 ISTAKRLAEFLGDQMVKDAGLSCRYIISRKPEGSPVTERAIPLAIFQAEPTVRKHFLRKW 1086

Query:  1083 CKTSS--DVGIRSIVDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLYKKVRE 1140
              K+SS  D  IR+I+DW YY +RL SAIQKIITIPAA+Q+V NPVPRV HPDWL+KK+ E
Sbjct:  1087 LKSSSLQDFDIRAILDWDYYIERLGSAIQKIITIPAALQQVKNPVPRVKHPDWLHKKLLE 1146

Query:  1141 KEDKFRQRKLVDIFSSLKKDDFLNKTCNAETNLMDENVEDLEDFPKKRRNSVNGPRPIVR 1200
             K D ++Q+K+ ++F+   +         A  +    +  D+EDF       V  P P   
Sbjct:  1147 KNDVYKQKKISELFTLEGRRQVT--MAEASEDSPRPSAPDMEDF-----GLVKLPHPAA- 1198

Query:  1201 CFEVNNEQKTVKTTDQVDSLRQQLEPSEVSDQQPSSQNAIDTENIDRIVDYKGWLELKKR 1260
                V  ++K V    Q +S  Q L P+    +      A+ T   + +V    WL   K+
Sbjct:  1199 --PVTVKRKRVLWESQEES--QDLTPTVPWQEILGQPPALGTSQEEWLV----WLRFHKK 1250

Query:  1261 KW----KDNLDRRKKQKL----GSLRASHQANGVSESLGDMI 1294
             KW    +  L RRK+Q+L    G LR     +G +  LG  +
Sbjct:  1251 KWQLQARQRLARRKRQRLESAEGVLRPGAIRDGPATGLGSFL 1292

 Score = 3116 (1101.9 bits), Expect = 0., Sum P(5) = 0.
 Identities = 636/1180 (53%), Positives = 821/1180 (69%)

Query:    17 QKLIRSA-EEELEAKLGYDLFSEGDKRLGWLLTFASSSLEDEDTRKVYSCIDLYF-VSQD 74
             ++L RS   ++++ + G++   E  ++ GWL+     +L      K Y  I       ++
Sbjct:    33 KRLERSQWTDKMDLRFGFERLKEPGEKTGWLINMHPVALP----YKPYFYIATRKGCERE 88

Query:    75 GSTFKSKYKFRPYFYAA-TKEKMEMDVEAYLRRRYESQIADIEILEKEDL-DLKNHLSGL 132
              S+F SK KF+       T  K ++D+  +L     + I  +     EDL  ++  +S  
Sbjct:    89 VSSFLSK-KFQGKIAKVETVPKEDLDLPNHLVGLKRNYIR-LSFHTVEDLVKVRKEISPA 146

Query:   133 HKSYLKISFDTVQQLMDVKKDLLH-VVERNQAKFDAAEAYESILTGKREQRPQDFLDCIV 191
              K   +          D    LL  V++R     D  E  + I          D LD IV
Sbjct:   147 VKKNRE-----QDHASDAYTALLSSVLQRGGVITDEEETSKKIA---------DQLDNIV 192

Query:   192 DLREYDVPYHIRFAIDNDVRCGQWYDVSISSTG-PL-LEKRVDLLQRAEVHVCAFDIETT 249
             D+REYDVPYHIR +ID  +    WY+V       P+ + +R DL++R +  V AFDIETT
Sbjct:   193 DMREYDVPYHIRLSIDLKIHVAHWYNVRYRGNAFPVEITRRDDLVERPDPVVLAFDIETT 252

Query:   250 KLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNVNN 309
             KLPLKFPDA+ D IMMISYM+DGQGYLI NRE V EDIED E+TPKPE+EG F V N  +
Sbjct:   253 KLPLKFPDAETDQIMMISYMIDGQGYLITNREIVSEDIEDFEFTPKPEYEGPFCVFNEPD 312

Query:   310 EIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDKNQGECR 369
             E  L++ WF H+QE KP I VTYNGD+FDWPF+E RAA HG  M +E+GFQ D +QGE +
Sbjct:   313 EAHLIQRWFEHVQETKPTIMVTYNGDFFDWPFVEARAAVHGLSMQQEIGFQKD-SQGEYK 371

Query:   370 AKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQMMASY 429
             A    H+DC  WVKRDSYLP GS  LKA  KAKLGYDP+E++PEDM R A E+PQ +A+Y
Sbjct:   372 APQCIHMDCLRWVKRDSYLPVGSHNLKAAAKAKLGYDPVELDPEDMCRMATEQPQTLATY 431

Query:   430 SVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVICPN 489
             SVSDAVATYYLYM YVHPFIF+L TIIPM PDEVLRKGSGTLCE LLMVQA+ AN+I PN
Sbjct:   432 SVSDAVATYYLYMKYVHPFIFALCTIIPMEPDEVLRKGSGTLCEALLMVQAFHANIIFPN 491

Query:   490 KHQSDPEKFYRN-HLLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQLLNNLDRDL 548
             K + +  K   + H+L+SETY+GGHVE LESGVFRSD+P  F+++P+A++ LL  +++ L
Sbjct:   492 KQEQEFNKLTDDGHVLDSETYVGGHVEALESGVFRSDIPCRFRMNPAAFDFLLQRVEKTL 551

Query:   549 QYAIKVEGKMDLESVSNYDEVKNAIMEKLLRLQEEPIREECPLIYHLDVAAMYPNIILTN 608
             ++A++ E K+ +E V+N++EV + I  KL  L++ P R ECPLIYHLDV AMYPNIILTN
Sbjct:   552 RHALEEEEKVPVEQVTNFEEVCDEIKSKLASLKDVPSRIECPLIYHLDVGAMYPNIILTN 611

Query:   609 RLQPPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYYHLKKQIESE-FVDG 667
             RLQP ++V +  C ACDFN+PG  C RK+ W WRGE     RS+Y+ ++ Q+ESE F   
Sbjct:   612 RLQPSAMVDEATCAACDFNKPGANCQRKMAWQWRGEFMPASRSEYHRIQHQLESEKFPPL 671

Query:   668 TNGHLSKSFLDLPKMEQQSRLKDRLKKYCQKAYKRVLDKPVTELREAGICMRENSFYVDT 727
                  +++F +L + EQ    K RL  YC+KAYK++    V E R   IC RENSFYVDT
Sbjct:   672 FPEGPARAFHELSREEQAKYEKRRLADYCRKAYKKIHITKVEE-RLTTICQRENSFYVDT 730

Query:   728 VRSFRDRRYEYKGLNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHKCILNSFYG 787
             VR+FRDRRYE+KGL+KVWK KLS A   G++ +++  ++M VLYDSLQLAHKCILNSFYG
Sbjct:   731 VRAFRDRRYEFKGLHKVWKKKLSAAVEVGDAAEVKRCKNMEVLYDSLQLAHKCILNSFYG 790

Query:   788 YVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLPGSFPENXX 847
             YVMRKGARWYSMEMAG+V +TGA II  AR LIE+IG+PLELDTDGIWCVLP SFPEN  
Sbjct:   791 YVMRKGARWYSMEMAGIVCFTGANIITQARELIEQIGRPLELDTDGIWCVLPNSFPENFV 850

Query:   848 XXXXXXXX-XXXISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEFEVDGPY 906
                         ISYP  MLN+ V    TNDQYQ L +P S TY T SE SI FEVDGPY
Sbjct:   851 FKTTNVKKPKVTISYPGAMLNIMVKEGFTNDQYQELAEPSSLTYVTRSENSIFFEVDGPY 910

Query:   907 KAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFLHGS 966
              AMILPASKEEG  +KKRYAVFN+DG+LAELKGFE+KRRGEL+LIK+FQ+ +F+ FL GS
Sbjct:   911 LAMILPASKEEGKKLKKRYAVFNEDGSLAELKGFEVKRRGELQLIKIFQSSVFEAFLKGS 970

Query:   967 TIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLADYGEQKSCAVTTA 1026
             T+EE Y +VA VA+ WLD+L ++  ++ DSEL + ISE+ +MS+ L DYGEQKS +++TA
Sbjct:   971 TLEEVYGSVAKVADYWLDVLYSKAANMPDSELFELISENRSMSRKLEDYGEQKSTSISTA 1030

Query:  1027 RRLSDFLGDTMVKDKGLRCQYIVACEPQGTPVSERAVPVAIFETDAEIMKFYLRKWCKTS 1086
             +RL++FLGD MVKD GL C+YI++ +P+G+PV+ERA+P+AIF+ +  + K +LRKW K+S
Sbjct:  1031 KRLAEFLGDQMVKDAGLSCRYIISRKPEGSPVTERAIPLAIFQAEPTVRKHFLRKWLKSS 1090

Query:  1087 S--DVGIRSIVDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLYKKVREKEDK 1144
             S  D  IR+I+DW YY +RL SAIQKIITIPAA+Q+V NPVPRV HPDWL+KK+ EK D 
Sbjct:  1091 SLQDFDIRAILDWDYYIERLGSAIQKIITIPAALQQVKNPVPRVKHPDWLHKKLLEKNDV 1150

Query:  1145 FRQRKLVDIFSSLKKDDFLNKTCNAETNLMDENVEDLEDF 1184
             ++Q+K+ ++F+   +         A  +    +  D+EDF
Sbjct:  1151 YKQKKISELFTLEGRRQVT--MAEASEDSPRPSAPDMEDF 1188

 Score = 447 (162.4 bits), Expect = 0., Sum P(5) = 0.
 Identities = 96/265 (36%), Positives = 147/265 (55%)

Query:  1442 LARYAHILWISDDGVPDLGGTSEEDECFADEVHQPV---LTYPGAYRKVSVELKIHHLSV 1498
             L R+ H+LW+S    PDLGG   +D C   E        +   G Y  V VEL + +L+V
Sbjct:  1650 LQRHNHLLWLSPTARPDLGGKEADDNCLVMEFDDQATVEINSSGCYSTVCVELDLQNLAV 1709

Query:  1499 NALLKSNQVNEMEGGGLFG--FD-------QDM-NSGPYNNELCGFDETTSSAPAFRVVK 1548
             N +L+S+ VN+MEG    G  FD       +DM   G   +    +DET   +  FR++K
Sbjct:  1710 NTILQSHHVNDMEGADSMGISFDVIQQASLEDMITGGQAASAPASYDETALCSNTFRILK 1769

Query:  1549 QLIQRCLTDAVTSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEF 1608
              ++   + +     N++AD  + H YRWL SP S LHDP LHR LH +M+K+F  L+AEF
Sbjct:  1770 SMVVGWVKEITQYHNIYADNQVMHFYRWLRSPSSLLHDPALHRTLHNMMKKLFLQLIAEF 1829

Query:  1609 RKLGATIIFANFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLF 1668
             ++LG+++I+ANF+++I+ T K  +  A AY + +  ++ ++E F  + +     W  LL+
Sbjct:  1830 KRLGSSVIYANFNRIILCTKKRRVEDAIAYVEYITSSIHSKETFHSLTISFSRCWEFLLW 1889

Query:  1669 MDQYNYGGIPARADESLD---DDSQ 1690
             MD  NYGGI  +    +     DSQ
Sbjct:  1890 MDPSNYGGIKGKVSSRIHCGLQDSQ 1914

 Score = 357 (130.7 bits), Expect = 0., Sum P(5) = 0.
 Identities = 95/323 (29%), Positives = 159/323 (49%)

Query:  1682 DESLDDDSQVDIV-SSWNIAEYLPK--EIQDHFVLVVSEFMYIPWKHAQKLAASRASLQE 1738
             +E  ++ +  D++ ++WNI ++LP+    Q++F+++VS ++   + H  K    R++   
Sbjct:  1937 EEEAEESNVEDLLENNWNILQFLPQAASCQNYFLMIVSAYIVAVY-HCMKDGLRRSA--P 1993

Query:  1739 GSSCTPSITVAAAE-NFESH-IVQYVKGEIS---SYFTGKLLSIVRDAIHHMKKMNNDQH 1793
             GS  TP     A++ + E+   V  + G I+    Y   +L          ++K      
Sbjct:  1994 GS--TPVRRRGASQLSQEAEGAVGALPGMITFSQDYVANELTQSFFTITQKIQKKVTGSR 2051

Query:  1794 NSPGVMQ---TAANIHKV-DAP-LEFIKHVCAAFALDQNVQHDVLVMRKNLLKYVRVREF 1848
             NS  + +        H + + P LEFIK+VC   +LD N+ + V  + ++LL+ V V EF
Sbjct:  2052 NSTELSEMFPVLPGSHLLLNNPALEFIKYVCKVLSLDTNITNQVNKLNRDLLRLVDVGEF 2111

Query:  1849 APEAEFRDPCPSFILPNVICSYCNXXXXX-----XXXXXXXXXXQDWHCAMPQCGQPYDR 1903
             + EA+FRDPC S++LP VIC  CN                      W C+   C  PYD 
Sbjct:  2112 SEEAQFRDPCRSYVLPEVICRSCNFCRDLDLCKDSSFSEDGAVLPQWLCS--NCQAPYDS 2169

Query:  1904 EVMENALLQIVRQRERLYHLQDLVCIRCNQVKAAHLAEQCACAGSFRCKEDASDFRSKMQ 1963
               +E  L+++++++   + LQDLVC++C  VK   +   C+CAG F        F  ++ 
Sbjct:  2170 SAIEMTLVEVLQKKLMAFTLQDLVCLKCRGVKETSMPVYCSCAGDFALTIHTQVFMEQIG 2229

Query:  1964 IFLNIANRQGFQLLQECTSWILE 1986
             IF NIA   G   L E   W+L+
Sbjct:  2230 IFRNIAQHYGMSYLLETLEWLLQ 2252

 Score = 221 (82.9 bits), Expect = 0., Sum P(5) = 0.
 Identities = 65/215 (30%), Positives = 107/215 (49%)

Query:  1204 VNNEQKTVKTTDQVDSLRQQLEPSEVSDQQPSSQNAIDTENIDRIVDYKGWLELKKRKW- 1262
             V  ++K V    Q +S  Q L P+    +      A+ T   + +V    WL   K+KW 
Sbjct:  1200 VTVKRKRVLWESQEES--QDLTPTVPWQEILGQPPALGTSQEEWLV----WLRFHKKKWQ 1253

Query:  1263 ---KDNLDRRKKQKLGSLRASHQANGVSESLGDMINHKEAQRRTGVGSYFRRQETAMTRC 1319
                +  L RRK+Q+L S      A GV       I    A   TG+GS+ RR   ++   
Sbjct:  1254 LQARQRLARRKRQRLES------AEGVLRP--GAIRDGPA---TGLGSFLRRTARSILDL 1302

Query:  1320 HWQIIQLVPSSQSGVFLAWVVVEGIMVRIPITVPRLFYLNSKDPIVEKFPG-RRVNKTLP 1378
              WQI+Q+  +SQ+G+F  W +V   +  I +++PR+FY+N +    E+    R+VN+ LP
Sbjct:  1303 PWQIVQISETSQAGLFRLWALVGSDLHCIRLSIPRVFYVNQRVAKAEEGASYRKVNRVLP 1362

Query:  1379 HGRRSFNLIEVMIDEDQFRKESKKLAALLADPEVE 1413
                  +NL E  + ED +++   ++ A L+ P++E
Sbjct:  1363 RSNMVYNLYEYSVPEDMYQEHINEINAELSAPDIE 1397

 Score = 44 (20.5 bits), Expect = 0., Sum P(5) = 0.
 Identities = 9/35 (25%), Positives = 18/35 (51%)

Query:  1414 VLGWQQNAAKIGMQRCAASSQWFNERISLARYAHI 1448
             VL WQ++ A+  ++         ++   ++RY HI
Sbjct:  1594 VLDWQRHGARRMIRHYLNLDTCLSQAFEMSRYFHI 1628

 Score = 43 (20.2 bits), Expect = 8.2e-65, Sum P(5) = 8.2e-65
 Identities = 12/50 (24%), Positives = 24/50 (48%)

Query:   482 KANVICPNKHQSDPEKFYRNHLLESETYIGGHVECLESGVFRSDLPTSFK 531
             ++N++      S PE  Y+ H+ E    +      +E GV+ + +P  F+
Sbjct:  1363 RSNMVYNLYEYSVPEDMYQEHINEINAELSA--PDIE-GVYETQVPLLFR 1409

 Score = 41 (19.5 bits), Expect = 8.2e-65, Sum P(5) = 8.2e-65
 Identities = 16/60 (26%), Positives = 22/60 (36%)

Query:   768 VVLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPL 827
             + LY   Q AHK +   F     R          +  +   GA       LL+EK+G  L
Sbjct:  1460 IYLYHHAQ-AHKALFGIFIPSQRRASVFVLDTVRSNQMPSLGALYSAEHGLLLEKVGPEL 1518

 Score = 39 (18.8 bits), Expect = 0., Sum P(2) = 0.
 Identities = 14/74 (18%), Positives = 30/74 (40%)

Query:  1277 LRASHQANGVSESLGDMINHKEAQRRTGVGSYFRRQETA--MTRCHWQIIQLVPSSQSGV 1334
             L+ S +A G  +   +  N  + + R G       +     +   +W I+Q +P + S  
Sbjct:  1910 LQDSQKAGGAED---EQENEDDEEERDGEEEEEAEESNVEDLLENNWNILQFLPQAASCQ 1966

Query:  1335 FLAWVVVEGIMVRI 1348
                 ++V   +V +
Sbjct:  1967 NYFLMIVSAYIVAV 1980


>ASPGD|ASPL0000036818 [details] [associations]
            symbol:AN3067 species:162425 "Emericella nidulans"
            [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0000166
            "nucleotide binding" evidence=IEA] [GO:0003697 "single-stranded DNA
            binding" evidence=IEA] [GO:0003887 "DNA-directed DNA polymerase
            activity" evidence=IEA] [GO:0008310 "single-stranded DNA specific
            3'-5' exodeoxyribonuclease activity" evidence=IEA] [GO:0003690
            "double-stranded DNA binding" evidence=IEA] [GO:0008622 "epsilon
            DNA polymerase complex" evidence=IEA] [GO:0006284 "base-excision
            repair" evidence=IEA] [GO:0045004 "DNA replication proofreading"
            evidence=IEA] [GO:0031573 "intra-S DNA damage checkpoint"
            evidence=IEA] [GO:0000731 "DNA synthesis involved in DNA repair"
            evidence=IEA] [GO:0007064 "mitotic sister chromatid cohesion"
            evidence=IEA] [GO:0071169 "establishment of protein localization to
            chromatin" evidence=IEA] [GO:0006272 "leading strand elongation"
            evidence=IEA] [GO:0006270 "DNA replication initiation"
            evidence=IEA] [GO:0010964 "regulation of chromatin silencing by
            small RNA" evidence=IEA] [GO:0070868 "heterochromatin organization
            involved in chromatin silencing" evidence=IEA] [GO:0007090
            "regulation of S phase of mitotic cell cycle" evidence=IEA]
            [GO:0033314 "mitotic DNA replication checkpoint" evidence=IEA]
            [GO:0035822 "gene conversion" evidence=IEA] [GO:0042276
            "error-prone translesion synthesis" evidence=IEA] [GO:0006297
            "nucleotide-excision repair, DNA gap filling" evidence=IEA]
            [GO:0006303 "double-strand break repair via nonhomologous end
            joining" evidence=IEA] [GO:0000723 "telomere maintenance"
            evidence=IEA] InterPro:IPR006133 InterPro:IPR006134
            InterPro:IPR006172 InterPro:IPR012337 InterPro:IPR013697
            Pfam:PF00136 Pfam:PF03104 Pfam:PF08490 PROSITE:PS00116
            SMART:SM00486 GO:GO:0005634 GO:GO:0000166 GO:GO:0046872
            GO:GO:0003677 GO:GO:0006260 GO:GO:0008270 EMBL:BN001306
            GO:GO:0051539 EMBL:AACD01000051 SUPFAM:SSF53098 GO:GO:0003887
            eggNOG:COG0417 KO:K02324 HOGENOM:HOG000196287 OMA:RITTTEC
            EMBL:AF019254 RefSeq:XP_660671.1 STRING:O93845
            EnsemblFungi:CADANIAT00010012 GeneID:2874392 KEGG:ani:AN3067.2
            OrthoDB:EOG4V9XZP Uniprot:O93845
        Length = 2207

 Score = 3339 (1180.4 bits), Expect = 0., Sum P(5) = 0.
 Identities = 641/1182 (54%), Positives = 842/1182 (71%)

Query:    15 KKQKLIRSAEEELEAKLGYDLFSEGDKRLGWLLTFASSSLEDEDTRKVYSCIDLYFVSQD 74
             +K + IR A   ++  LG+  F  G+KR+GWL+   S+S+ED +     + +D YF+  D
Sbjct:    43 EKFEAIRLANS-IDESLGFPRFEAGEKRVGWLINMHSTSIEDPNVPGGRAGVDYYFLDDD 101

Query:    75 GSTFKSKYKFRPYFYAATKEKMEMDVEAYLRRRYESQIADIEILEKEDLDLKNHLSGLHK 134
             G +FK+  ++ PYF  A K   E +VE + RR +E  I  I+ + KEDL L NHL G  +
Sbjct:   102 GGSFKATVEYDPYFLIAVKTGHEAEVEEWCRRMFEGLIKKIKRVVKEDLKLPNHLLGHRR 161

Query:   135 SYLKISFDTVQQLMDVKKDLLHVVERNQAKFDAAEAYESILTGKREQRPQDFLDCIVDLR 194
             ++L++ F  V  L++V+K LL + E+N+                R     +  D I+D+R
Sbjct:   162 TFLQLDFANVSHLLEVRKTLLPLAEKNRKN-------------ARPNGTTNASDFIIDIR 208

Query:   195 EYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLLEKRVDLLQRAEVHVCAFDIETTKLPLK 254
             EYDVPYH+R AID D+R G+WY V  +     L    + L RA+  V AFDIETTKLPLK
Sbjct:   209 EYDVPYHVRVAIDKDIRIGKWYTVEATHGIISLTCLEERLTRADPVVLAFDIETTKLPLK 268

Query:   255 FPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNVNNEIELL 314
             FPD+  D IMMISYM+DGQG+LI NRE V EDI+D EYTPKPE+ G F + N  NE  ++
Sbjct:   269 FPDSVIDQIMMISYMIDGQGFLITNREIVSEDIDDFEYTPKPEYSGPFMIFNEPNERAVI 328

Query:   315 RLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDKNQGECRAKFAC 374
               +F H++E KP +  TYNGD+FDWPF+E RA+  G  M +E+GF+  KN  +      C
Sbjct:   329 ERFFEHIKEAKPTVIATYNGDFFDWPFVEARASVLGIDMYKEIGFR--KNSEDIYQSDHC 386

Query:   375 -HLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQMMASYSVSD 433
              H+DCFAWV RDSYLPQGS+GLKAVT AKLGYDP E++PE M  +A E+PQ +A YSVSD
Sbjct:   387 AHMDCFAWVNRDSYLPQGSRGLKAVTVAKLGYDPDELDPELMTPYASERPQTLAEYSVSD 446

Query:   434 AVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVICPNKHQS 493
             AVATYYLYM Y+HPFIFSL TI+P++PD+ LRKG+GTLCEMLLMVQAYK N++ PNKH+ 
Sbjct:   447 AVATYYLYMKYIHPFIFSLCTILPLNPDDTLRKGTGTLCEMLLMVQAYKGNIVLPNKHKD 506

Query:   494 DPEKFYRNHLLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQLLNNLDRDLQYAIK 553
              PE FY  HLLESETY+GGHVE +E+GVFRSD+P  F +DP+A ++LL +LD  L+++I+
Sbjct:   507 PPEAFYEGHLLESETYVGGHVESIEAGVFRSDIPVPFNIDPTAVDELLRDLDAALKFSIE 566

Query:   554 VEGKMDLESVSNYDEVKNAIMEKLLRLQEEPIREECPLIYHLDVAAMYPNIILTNRLQPP 613
             VE K  L+ V+NY+EVK  I + L  L+E P R E P IYHLDVA+MYPNI++TNRLQP 
Sbjct:   567 VEEKKSLDDVTNYEEVKGQIAKLLTDLRENPHRNEVPFIYHLDVASMYPNIMITNRLQPD 626

Query:   614 SIVTDEVCTACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYYHLKKQIESEFVDG-TNGHL 672
             S++ +  C ACDFNRPGKTC R+L W WRGE    KR +Y  +++ +++E   G T    
Sbjct:   627 SLIQESNCAACDFNRPGKTCDRRLPWAWRGEFLPAKRDEYNMIRQAVQNERFPGRTKKSP 686

Query:   673 SKSFLDLPKMEQQSRLKDRLKKYCQKAYKRVLDKPVTELREAGICMRENSFYVDTVRSFR 732
              ++F +L   EQ + +K RL+ Y +K Y ++ D   T +REA IC REN FYVDTVRSFR
Sbjct:   687 MRAFTELSAEEQAAIVKKRLQDYSKKIYHKIHDSK-TMVREAIICQRENPFYVDTVRSFR 745

Query:   733 DRRYEYKGLNKVWKGKLSEAKASGN-SIKIQEAQDMVVLYDSLQLAHKCILNSFYGYVMR 791
             DRRY++KG  KVWKGK    K+SG  + +I+EA+ M+VLYDSLQLAHK ILNSFYGYVMR
Sbjct:   746 DRRYDFKGKQKVWKGKTESLKSSGAPAAEIEEAKKMIVLYDSLQLAHKVILNSFYGYVMR 805

Query:   792 KGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLPGSFPENXXXXXX 851
             KG+RWYSMEMAGV   TGA+IIQ AR L+E+IG+PLELDTDGIWC+LPG+FPEN      
Sbjct:   806 KGSRWYSMEMAGVTCLTGARIIQMARELVERIGRPLELDTDGIWCMLPGTFPENFSFTLK 865

Query:   852 XXXXXXXISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEFEVDGPYKAMIL 911
                    ISYPCVMLN  V  + TN QYQ+L +P +  YETHSE SI FEVDGPY+AMIL
Sbjct:   866 NGKKLG-ISYPCVMLNHLVHGSYTNHQYQSLANPATFRYETHSENSIFFEVDGPYRAMIL 924

Query:   912 PASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFLHGSTIEEC 971
             P SKEE   +KKRYAVFNDDG+LAELKGFE+KRRGELKLIK+FQ ++F  FL G+T+ E 
Sbjct:   925 PTSKEEDKNLKKRYAVFNDDGSLAELKGFEVKRRGELKLIKIFQTQIFKFFLEGTTLAET 984

Query:   972 YSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLADYGEQKSCAVTTARRLSD 1031
             Y+AVA VA+RWLD+L   G  +AD ELI+ ISE+ +M+K+L +YG QKS ++TTARRL++
Sbjct:   985 YAAVARVADRWLDVLYEHGATLADEELIELISENRSMTKTLEEYGNQKSTSITTARRLAE 1044

Query:  1032 FLGDTMVKDKGLRCQYIVACEPQGTPVSERAVPVAIFETDAEIMKFYLRKWCKTS-SDVG 1090
             FLG+ MVKDKGL C+YI++  P+ TPV+ERA+PV IF  +  I + +LRKW K    D+ 
Sbjct:  1045 FLGEQMVKDKGLNCKYIISARPRNTPVTERAIPVTIFSAEDSIKRHFLRKWLKDDPGDMD 1104

Query:  1091 IRSIVDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLYKKVREKEDKFRQRKL 1150
              RS++DW YY +RL S +QK+ITIPAA+QK+ NPVPRV HP+WL +++ +++D+F+Q K+
Sbjct:  1105 PRSVIDWDYYLERLGSVVQKLITIPAALQKIRNPVPRVAHPEWLQRRINKQDDRFKQVKM 1164

Query:  1151 VDIFSSLKKDDFLNKTCNAETNLMDENVEDLEDFPKKRRNSV 1192
              D+F   +K    N   +  TN++D  V+  ++  +   +S+
Sbjct:  1165 TDMFGKSEK----NPLSDISTNIIDHRVQHADNLDEAMADSM 1202

 Score = 533 (192.7 bits), Expect = 0., Sum P(5) = 0.
 Identities = 146/562 (25%), Positives = 267/562 (47%)

Query:  1448 ILWISDDGVPDLGGTSEEDECFA-DEVHQPVLTYPGAYRKVSVELKIHHLSVNALLKSNQ 1506
             +LW S    PD  G  ++D     + V  P +  PG+Y  V VEL++ +L++N +L S+ 
Sbjct:  1657 VLWWSSTAKPDHAGYEKDDITGPLERVGMPCVNVPGSYTTVCVELEVRNLAINTILTSSI 1716

Query:  1507 VNEMEGGGLFGFDQDMNSGPYNNELCGFDETTSSAPAFRVVKQLIQRCLTDAVTSGNVFA 1566
             +NE EG        D ++    + +   ++  +SA A  V++++++   ++A   GN  A
Sbjct:  1717 INEAEGADSLLAPSDPSAESSGSGVLYSEKAFASAGAV-VLREMVKHWWSEAC-QGNNMA 1774

Query:  1567 DAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEFRKLGATIIFANFSKVIID 1626
             D ++QHL RW+ SP S L+D  LH+ +  + +K F  L+AEFR++G+ ++FA+ +++++ 
Sbjct:  1775 DIMVQHLIRWVESPASCLYDRSLHQYVRMLSRKSFQQLMAEFRRVGSNVVFASPTRLLLQ 1834

Query:  1627 TGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLFMDQYNYGGIPARADESLD 1686
             T K ++  A AY   +LK+++    F +I+L+   +W  L++ D+YNYGG   + + +  
Sbjct:  1835 TSKTEVGNAYAYSQYVLKSIRANPSFHFIDLDIKEYWDYLVWYDEYNYGGKGCQ-EVAET 1893

Query:  1687 DDSQVDIVSSWNIAEYLPKEIQDHFVLVVSEFMYIPWKHAQKLAASRASLQEGSSCTPSI 1746
             ++  ++ V  W ++ +LP  +Q  F   V E  YI   H+ K   S        S TP +
Sbjct:  1894 EEQPLETVMHWQLSRFLPTPMQTIFHDWVVE--YIELMHSFKRPES------DDSSTPRL 1945

Query:  1747 T-VAAAENFESHIVQYVKGEISSYFTGKLLSIVRDAIHHMKK--MNNDQHNS------PG 1797
             T +   +       + +   +S  F+  L   +   I   ++  ++ +  +       PG
Sbjct:  1946 TQIPIGQPEPGQENEELSAALSDRFSKPLKKQISGLIRRQREELLHPELASDYVFPILPG 2005

Query:  1798 VMQTAANIHKVDAPLEFIKHVCAAFALDQNVQHDVLVMRKNLLKYVRVREFAPEAEFRDP 1857
             V+ T  N  K +  LE +K +    +L +    +  ++R+ LL    VREF+ E  F +P
Sbjct:  2006 VL-TDPNEEKRNPVLELVKLLMQVLSLSKTTALETRLLRRELLALFEVREFSKEGRFENP 2064

Query:  1858 CPSFILPNVICSYCNXXXX--------------XXXXXXXXXXXQDWHCAMPQCGQPYDR 1903
               S  +P + CS C                              + W C  P C   YDR
Sbjct:  2065 GSSLKIPELTCSACCLIRDLDLCRDEDVLPERGSGSGPDSATSSRPWCC--PFCQTEYDR 2122

Query:  1904 EVMENALLQIVRQRERLYHLQDLVCIRCNQVKAAHLAEQCACAGSFRCKEDASDFRSKMQ 1963
                E  L+  V      +  QDL C +C  +K +   E C+C+G +    + +D   +++
Sbjct:  2123 LAQEEMLIGQVWGMVVAWQTQDLKCSKCGTLKISEFMEHCSCSGQWTETMNRADIEKRLK 2182

Query:  1964 IFLNIANRQGFQLLQECTSWIL 1985
             +  ++A     +LLQ     +L
Sbjct:  2183 VLESVAKFHELKLLQVVVEEVL 2204

 Score = 161 (61.7 bits), Expect = 0., Sum P(5) = 0.
 Identities = 38/110 (34%), Positives = 62/110 (56%)

Query:  1309 FRRQETAMTRCHWQIIQLVPSSQSGVFLAWVVVEGIMVRIPITVPRLFYLNSKD---PIV 1365
             FR Q   +    WQ++QL  +S+ G+  A+V+++  +  + I VPR  Y+N K    P V
Sbjct:  1285 FRNQAELLYISTWQVLQLAETSRPGIVRAFVLIDRKIHALTIKVPRCVYINLKQDSLPDV 1344

Query:  1366 E--KFPGRRVNKTLPHGRRSFNLIEVMIDEDQFRKESKKLAALLADPEVE 1413
             E  +    +VN TLP+G  S +L ++ + E+ F +E+ K+  LL  P VE
Sbjct:  1345 EVPECEVEKVNHTLPNGHPSVHLFKLTLSEETFLREADKIHVLLQHPSVE 1394

 Score = 60 (26.2 bits), Expect = 0., Sum P(4) = 0.
 Identities = 28/104 (26%), Positives = 47/104 (45%)

Query:  1313 ETAMTRCHWQIIQLVPSSQSGVFLAWVVVEGIMVRIPITVPRLFYLNSKDPIVEKFPGRR 1372
             ET M   HWQ+ + +P+    +F  WVV E I +      P     +S  P + + P   
Sbjct:  1899 ETVM---HWQLSRFLPTPMQTIFHDWVV-EYIELMHSFKRPESD--DSSTPRLTQIP--- 1949

Query:  1373 VNKTLPHGRRSFNLIEVMIDEDQFRKESKK-LAALLADPEVEVL 1415
             + +  P G+ +  L   +   D+F K  KK ++ L+     E+L
Sbjct:  1950 IGQPEP-GQENEELSAAL--SDRFSKPLKKQISGLIRRQREELL 1990

 Score = 53 (23.7 bits), Expect = 0., Sum P(5) = 0.
 Identities = 13/42 (30%), Positives = 18/42 (42%)

Query:  1407 LADPEVEVLGWQQNAAKIGMQRCAASSQWFNERISLARYAHI 1448
             ++D  +  LGWQ   AK  +      S W      LARY  +
Sbjct:  1588 VSDMNLPPLGWQSFIAKRLVTHYLYLSSWVQHLTMLARYGDV 1629

 Score = 45 (20.9 bits), Expect = 0., Sum P(5) = 0.
 Identities = 13/49 (26%), Positives = 27/49 (55%)

Query:  1249 VDYKGWLELKKRKWKDNLDRRKKQKLGSLRASHQANGVSESLGDMINHK 1297
             V +  WL+ +  K +D  DR K+ K+  +    + N +S+   ++I+H+
Sbjct:  1142 VAHPEWLQRRINK-QD--DRFKQVKMTDMFGKSEKNPLSDISTNIIDHR 1187

 Score = 41 (19.5 bits), Expect = 1.2e-42, Sum P(4) = 1.2e-42
 Identities = 8/26 (30%), Positives = 14/26 (53%)

Query:  1377 LPHGRRSFNLIEVMIDEDQFRKESKK 1402
             LP  R  +N+I   +  ++F   +KK
Sbjct:   659 LPAKRDEYNMIRQAVQNERFPGRTKK 684

 Score = 40 (19.1 bits), Expect = 0., Sum P(4) = 0.
 Identities = 14/54 (25%), Positives = 24/54 (44%)

Query:  1583 KLHDPVLHRILHKVMQKVFAMLLAEFRKLGATIIFANFSKVIIDTGK---FDLS 1633
             K+H  + H  +  V ++   + L    KLG+   F    + ++  G    FDLS
Sbjct:  1383 KIHVLLQHPSVEGVYERNIPLNLRAVLKLGSICTFDEAQRGVLGDGLERGFDLS 1436

 Score = 38 (18.4 bits), Expect = 3.4e-55, Sum P(4) = 3.4e-55
 Identities = 7/18 (38%), Positives = 9/18 (50%)

Query:   251 LPLKFPDADYDIIMMISY 268
             LP K P  D D +  + Y
Sbjct:  1234 LPAKMPSIDDDYVGFLKY 1251

 Score = 37 (18.1 bits), Expect = 0., Sum P(4) = 0.
 Identities = 5/10 (50%), Positives = 7/10 (70%)

Query:  1426 MQRCAASSQW 1435
             M+ C+ S QW
Sbjct:  2159 MEHCSCSGQW 2168

 Score = 37 (18.1 bits), Expect = 1.4e-54, Sum P(5) = 1.4e-54
 Identities = 10/34 (29%), Positives = 17/34 (50%)

Query:  1179 EDLEDFPKKRRNSVNGPRPIVRCFEVNNEQKTVK 1212
             ED++DF    +   +GP  I   F   NE+  ++
Sbjct:   299 EDIDDFEYTPKPEYSGPFMI---FNEPNERAVIE 329


>SGD|S000005206 [details] [associations]
            symbol:POL2 "Catalytic subunit of DNA polymerase (II)
            epsilon" species:4932 "Saccharomyces cerevisiae" [GO:0006272
            "leading strand elongation" evidence=IMP] [GO:0008310
            "single-stranded DNA specific 3'-5' exodeoxyribonuclease activity"
            evidence=IMP] [GO:0045004 "DNA replication proofreading"
            evidence=IMP] [GO:0006297 "nucleotide-excision repair, DNA gap
            filling" evidence=IMP] [GO:0033314 "mitotic DNA replication
            checkpoint" evidence=IMP] [GO:0003697 "single-stranded DNA binding"
            evidence=IDA] [GO:0003690 "double-stranded DNA binding"
            evidence=IDA] [GO:0006261 "DNA-dependent DNA replication"
            evidence=IDA] [GO:0008622 "epsilon DNA polymerase complex"
            evidence=IDA] [GO:0070868 "heterochromatin organization involved in
            chromatin silencing" evidence=IGI;IMP] [GO:0003887 "DNA-directed
            DNA polymerase activity" evidence=IEA;IMP;IDA] [GO:0042276
            "error-prone translesion synthesis" evidence=IDA] [GO:0035822 "gene
            conversion" evidence=IMP] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0006303 "double-strand break repair via nonhomologous end
            joining" evidence=IGI;IMP] [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0003677 "DNA binding" evidence=IEA] [GO:0006139
            "nucleobase-containing compound metabolic process" evidence=IEA]
            [GO:0006260 "DNA replication" evidence=IEA] [GO:0008270 "zinc ion
            binding" evidence=IEA] [GO:0006284 "base-excision repair"
            evidence=IMP] [GO:0031573 "intra-S DNA damage checkpoint"
            evidence=IGI;IMP;IPI] [GO:0051536 "iron-sulfur cluster binding"
            evidence=IEA] [GO:0051539 "4 iron, 4 sulfur cluster binding"
            evidence=IEA] [GO:0005657 "replication fork" evidence=IDA]
            [GO:0007064 "mitotic sister chromatid cohesion" evidence=IMP]
            [GO:0000731 "DNA synthesis involved in DNA repair" evidence=IMP]
            [GO:0016740 "transferase activity" evidence=IEA] [GO:0016779
            "nucleotidyltransferase activity" evidence=IEA] [GO:0046872 "metal
            ion binding" evidence=IEA] InterPro:IPR006133 InterPro:IPR006134
            InterPro:IPR006172 InterPro:IPR012337 InterPro:IPR013697
            Pfam:PF00136 Pfam:PF03104 Pfam:PF08490 PROSITE:PS00116
            SMART:SM00486 SGD:S000005206 GO:GO:0000166 GO:GO:0046872
            GO:GO:0006284 GO:GO:0008270 EMBL:BK006947 GO:GO:0051539
            GO:GO:0003690 GO:GO:0003697 SUPFAM:SSF53098 GO:GO:0070868
            EMBL:X92494 GO:GO:0006303 GO:GO:0033314 GO:GO:0007064 GO:GO:0000731
            GO:GO:0031573 GO:GO:0008622 GO:GO:0003887 GO:GO:0042276
            GO:GO:0006297 GO:GO:0006272 eggNOG:COG0417 GO:GO:0045004
            GO:GO:0008310 KO:K02324 OMA:QEESQDL GeneTree:ENSGT00390000010194
            HOGENOM:HOG000196287 OrthoDB:EOG4V9XZP EMBL:M60416 EMBL:Z71538
            PIR:A36028 RefSeq:NP_014137.1 ProteinModelPortal:P21951
            DIP:DIP-2532N IntAct:P21951 MINT:MINT-670401 STRING:P21951
            PaxDb:P21951 PeptideAtlas:P21951 EnsemblFungi:YNL262W GeneID:855459
            KEGG:sce:YNL262W CYGD:YNL262w NextBio:979382 Genevestigator:P21951
            GermOnline:YNL262W GO:GO:0035822 Uniprot:P21951
        Length = 2222

 Score = 3250 (1149.1 bits), Expect = 0., Sum P(4) = 0.
 Identities = 652/1260 (51%), Positives = 866/1260 (68%)

Query:    51 SSSLEDEDTRKVYSCIDLYFVSQDGSTFKSKYKFRPYFYAATKEKMEM-DVEAYLRRRYE 109
             S+  E   T +  S +D YF+ ++G +FKS   + PYF+ A  ++  + DVE  +++  E
Sbjct:   102 SNDGERVTTNQGISGVDFYFLDEEGGSFKSTVVYDPYFFIACNDESRVNDVEELVKKYLE 161

Query:   110 SQIADIEILEKEDLDLKNHLSGLHKSYLKISFDTVQQLMDVKKDLLHVVERNQAKFDAAE 169
             S +  ++I+ KEDL + NHL GL K+ +K+SF    QL + +K L  +++ N        
Sbjct:   162 SCLKSLQIIRKEDLTMDNHLLGLQKTLIKLSFVNSNQLFEARKLLRPILQDNANNNVQRN 221

Query:   170 AYESILTGKREQRPQDFLDCIVDLREYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLLEK 229
              Y     G  +    D    I D+REYDVPYH+R +ID D+R G+WY V+    G + + 
Sbjct:   222 IYNVAANGSEKV---DAKHLIEDIREYDVPYHVRVSIDKDIRVGKWYKVT--QQGFIEDT 276

Query:   230 RVDLLQRAEVHVCAFDIETTKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIED 289
             R   +  A+  V AFDIETTK PLKFPD+  D IMMISYM+DG+G+LI NRE + EDIED
Sbjct:   277 RK--IAFADPVVMAFDIETTKPPLKFPDSAVDQIMMISYMIDGEGFLITNREIISEDIED 334

Query:   290 LEYTPKPEFEGYFKVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHH 349
              EYTPKPE+ G+F + N N+E+ LL+ +F H+++V+P +  T+NGD+FDWPF+  R+  H
Sbjct:   335 FEYTPKPEYPGFFTIFNENDEVALLQRFFEHIRDVRPTVISTFNGDFFDWPFIHNRSKIH 394

Query:   350 GFKMSEELGFQCDKNQGECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLE 409
             G  M +E+GF  D  +GE ++ +  H+DCF WVKRDSYLPQGSQGLKAVT++KLGY+P+E
Sbjct:   395 GLDMFDEIGFAPDA-EGEYKSSYCSHMDCFRWVKRDSYLPQGSQGLKAVTQSKLGYNPIE 453

Query:   410 VNPEDMVRFAKEKPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSG 469
             ++PE M  +A EKPQ ++ YSVSDAVATYYLYM YVHPFIFSL TIIP++PDE LRKG+G
Sbjct:   454 LDPELMTPYAFEKPQHLSEYSVSDAVATYYLYMKYVHPFIFSLCTIIPLNPDETLRKGTG 513

Query:   470 TLCEMLLMVQAYKANVICPNKHQSDP-EKFYRNHLLESETYIGGHVECLESGVFRSDLPT 528
             TLCEMLLMVQAY+ N++ PNKH +DP E+FY  HLLESETY+GGHVE LE+GVFRSDL  
Sbjct:   514 TLCEMLLMVQAYQHNILLPNKH-TDPIERFYDGHLLESETYVGGHVESLEAGVFRSDLKN 572

Query:   529 SFKLDPSAYEQLLNNLDRDLQYAIKVEGKMDLESVSNYDEVKNAIMEKLLRLQEEPIREE 588
              FK+DPSA ++LL  L   L+++++VE K  ++ V+N++E+KN I +KLL L+E  IR E
Sbjct:   573 EFKIDPSAIDELLQELPEALKFSVEVENKSSVDKVTNFEEIKNQITQKLLELKENNIRNE 632

Query:   589 CPLIYHLDVAAMYPNIILTNRLQPPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEIFMG 648
              PLIYH+DVA+MYPNI+ TNRLQP SI  +  C +CDFNRPGKTC RKL+W WRGE F  
Sbjct:   633 LPLIYHVDVASMYPNIMTTNRLQPDSIKAERDCASCDFNRPGKTCARKLKWAWRGEFFPS 692

Query:   649 KRSDYYHLKKQIESEFVDGTNGHLSKSFL---DLPKMEQQSRLKDRLKKYCQKAYKRVLD 705
             K  +Y  +K+ +++E     N    K  L   +L   +Q   +K RL +Y +K Y RV  
Sbjct:   693 KMDEYNMIKRALQNETFPNKNKFSKKKVLTFDELSYADQVIHIKKRLTEYSRKVYHRVKV 752

Query:   706 KPVTELREAGICMRENSFYVDTVRSFRDRRYEYKGLNKVWKGKLSEAKASGNSIKIQEAQ 765
               + E REA +C REN FYVDTV+SFRDRRYE+KGL K WKG LS+   S    +  EA+
Sbjct:   753 SEIVE-REAIVCQRENPFYVDTVKSFRDRRYEFKGLAKTWKGNLSKIDPSDKHAR-DEAK 810

Query:   766 DMVVLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGK 825
              M+VLYDSLQLAHK ILNSFYGYVMRKG+RWYSMEMAG+   TGA IIQ AR L+E++G+
Sbjct:   811 KMIVLYDSLQLAHKVILNSFYGYVMRKGSRWYSMEMAGITCLTGATIIQMARALVERVGR 870

Query:   826 PLELDTDGIWCVLPGSFPENXXXXXXXXXXXXXISYPCVMLNVDVARNNTNDQYQTLVDP 885
             PLELDTDGIWC+LP SFPE              +SYPC MLN  V +  TN QYQ L DP
Sbjct:   871 PLELDTDGIWCILPKSFPETYFFTLENGKKLY-LSYPCSMLNYRVHQKFTNHQYQELKDP 929

Query:   886 VSKTYETHSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRR 945
             ++  YETHSE +I FEVDGPYKAMILP+SKEEG  IKKRYAVFN+DG+LAELKGFE+KRR
Sbjct:   930 LNYIYETHSENTIFFEVDGPYKAMILPSSKEEGKGIKKRYAVFNEDGSLAELKGFELKRR 989

Query:   946 GELKLIKVFQAELFDKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISES 1005
             GEL+LIK FQ+++F  FL G T+E CYSAVA+V NRWLD+LD+ G  + D +L+  I E+
Sbjct:   990 GELQLIKNFQSDIFKVFLEGDTLEGCYSAVASVCNRWLDVLDSHGLMLEDEDLVSLICEN 1049

Query:  1006 STMSKSLADYGEQKSCAVTTARRLSDFLGDTMVKDKGLRCQYIVACEPQGTPVSERAVPV 1065
              +MSK+L +Y  QKS ++TTARRL DFLG+ MVKDKGL+C+YI++ +P   PV+ERA+PV
Sbjct:  1050 RSMSKTLKEYEGQKSTSITTARRLGDFLGEDMVKDKGLQCKYIISSKPFNAPVTERAIPV 1109

Query:  1066 AIFETDAEIMKFYLRKWCKTSS--DVGIRSIVDWSYYKQRLSSAIQKIITIPAAMQKVSN 1123
             AIF  D  I + +LR+W    S  D+ IR+I+DW YY++RL SAIQKIITIPAA+Q VSN
Sbjct:  1110 AIFSADIPIKRSFLRRWTLDPSLEDLDIRTIIDWGYYRERLGSAIQKIITIPAALQGVSN 1169

Query:  1124 PVPRVVHPDWLYKKVREKEDKFRQRKLVDIFSSLKKDDFLNKTCNAETNLMDENVEDLED 1183
             PVPRV HPDWL +K+  KEDKF+Q  L   FS  K    + K  + E +L +  VE  ED
Sbjct:  1170 PVPRVEHPDWLKRKIATKEDKFKQTSLTKFFSKTKNVPTMGKIKDIE-DLFEPTVE--ED 1226

Query:  1184 FPKKRRNSVNGPRPIVRCFEVNNEQKTVKTTDQVDSLRQQLEPSEVSDQQPS-SQNAIDT 1242
               K +       + +       +++K  + T++ D L   + PSE+    PS  ++ +  
Sbjct:  1227 NAKIKIARTTKKKAV-------SKRKRNQLTNEEDPL---VLPSEI----PSMDEDYVGW 1272

Query:  1243 ENIDRIVDYKGWLELKKRK---WKDNLDRRKKQKLGSLRASHQANGVSESLGDMINHKEA 1299
              N  +I  +K     +KR+   + +    R++  LGS+    QA   + S  +++ +K++
Sbjct:  1273 LNYQKI-KWKIQARDRKRRDQLFGNTNSSRERSALGSM-IRKQAESYANSTWEVLQYKDS 1330

 Score = 533 (192.7 bits), Expect = 0., Sum P(4) = 0.
 Identities = 136/542 (25%), Positives = 256/542 (47%)

Query:  1448 ILWISDDG-VPDLGGTSEEDEC----FADEVHQPVLTYPGAYRKVSVELKIHHLSVNALL 1502
             +LW ++   +PD GG   + +       ++   P +   G Y  V +++ + +L+VN +L
Sbjct:  1686 VLWWNEKAPLPDHGGIQNDFDLNTSWIMNDSEFPKINNSGVYDNVVLDVGVDNLTVNTIL 1745

Query:  1503 KSNQVNEMEGGGLFGFDQDMNS-GPYNNELCGFDETTSSAPAFRVVKQLIQRCLTDAVTS 1561
              S  +N+ EG  L   +  ++      N    F     S  A  V++ +++    +A+  
Sbjct:  1746 TSALINDAEGSDLVNNNMGIDDKDAVINSPSEFVHDAFSNDALNVLRGMLKEWWDEALKE 1805

Query:  1562 GNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEFRKLGATIIFANFS 1621
              N  AD ++  L  W+ +P++KL D +L   +H + +K    L+ EF  LG+TI++A+ +
Sbjct:  1806 -NSTADLLVNSLASWVQNPNAKLFDGLLRYHVHNLTKKALLQLVNEFSALGSTIVYADRN 1864

Query:  1622 KVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLFMDQYNYGGIPARA 1681
             +++I T K+      AY   ++KA++T  +F +++L    +W  L++MD++N+ G+    
Sbjct:  1865 QILIKTNKYSPENCYAYSQYMMKAVRTNPMFSYLDLNIKRYWDLLIWMDKFNFSGLACIE 1924

Query:  1682 DESLDDDSQVDIVSSWNIAEYLPKEIQDHFVLVVSEFMYIPWKHAQKLAASRASLQEGSS 1741
              E  ++      VS W + ++L    Q  F     ++M I      K   S   L  G+ 
Sbjct:  1925 IEEKENQDYT-AVSQWQLKKFLSPIYQPEF----EDWMMIILDSMLKTKQSYLKLNSGTQ 1979

Query:  1742 CTPSITVAAAENFESHIVQYVKGEISSYFTGKLLSIVRDAIHHMKKMNND-QHNSPGVMQ 1800
                 I     ++ E  +   + G  S  F+  L+  V+    + ++   D Q+ +  V+ 
Sbjct:  1980 RPTQIVNVKKQDKEDSVENSLNG-FSHLFSKPLMKRVKKLFKNQQEFILDPQYEADYVIP 2038

Query:  1801 TAANIH-KVDAPL-EFIKHVCAAFALDQNVQHDVLVMRKNLLKYVRVREFAPEAEFRDPC 1858
                  H  V  PL E +K +C    L ++   ++  +RK LLK   +REFA  AEF+DP 
Sbjct:  2039 VLPGSHLNVKNPLLELVKSLCHVMLLSKSTILEIRTLRKELLKIFELREFAKVAEFKDPS 2098

Query:  1859 PSFILPNVICSYCNXXXXXXXXXXXXXXXQDWHCAMPQCGQPYDREVMENALLQIVRQRE 1918
              S ++P+ +C YC                  + C   +C + +++ +++  L+Q +R   
Sbjct:  2099 LSLVVPDFLCEYCFFISDIDFCKAAPESI--FSCV--RCHKAFNQVLLQEHLIQKLRSDI 2154

Query:  1919 RLYHLQDLVCIRCNQVKAAHLAEQCACAGSFRCKEDASDFRSKMQIFLNIANRQGFQLLQ 1978
               Y +QDL C RC++VK  +++  C CAG++           K+ +F  +A   GF +L 
Sbjct:  2155 ESYLIQDLRCSRCHKVKRDYMSAHCPCAGAWEGTLPRESIVQKLNVFKQVAKYYGFDILL 2214

Query:  1979 EC 1980
              C
Sbjct:  2215 SC 2216

 Score = 110 (43.8 bits), Expect = 0., Sum P(4) = 0.
 Identities = 28/128 (21%), Positives = 58/128 (45%)

Query:  1295 NHKEAQRRTGVGSYFRRQETAMTRCHWQIIQLVPSSQSGVFLAWVVVEGIMVRIPITVPR 1354
             N   ++ R+ +GS  R+Q  +     W+++Q   S + GV   +V + G +  I   +P+
Sbjct:  1296 NTNSSRERSALGSMIRKQAESYANSTWEVLQYKDSGEPGVLEVFVTINGKVQNITFHIPK 1355

Query:  1355 LFYLNSKDPIV--EKFPGRRVNKT---LPHGRRSFN-----LIEVMIDEDQFRKESKKLA 1404
               Y+  K   +  +K     + K+   LP+  ++ N     L ++ + E  F +E +   
Sbjct:  1356 TIYMKFKSQTMPLQKIKNCLIEKSSASLPNNPKTSNPAGGQLFKITLPESVFLEEKENCT 1415

Query:  1405 ALLADPEV 1412
             ++  D  V
Sbjct:  1416 SIFNDENV 1423

 Score = 52 (23.4 bits), Expect = 0., Sum P(4) = 0.
 Identities = 10/34 (29%), Positives = 17/34 (50%)

Query:  1415 LGWQQNAAKIGMQRCAASSQWFNERISLARYAHI 1448
             L WQ    K  +    +S  W +  I L++Y++I
Sbjct:  1625 LNWQPTLLKKLVNHVLSSGSWISHLIKLSQYSNI 1658

 Score = 45 (20.9 bits), Expect = 1.7e-50, Sum P(4) = 1.7e-50
 Identities = 21/79 (26%), Positives = 33/79 (41%)

Query:  1187 KRRNSVNGPRPIVRCFEVNNEQKTVKTTDQVDSLRQQLEPSEVSDQQ---------PSSQ 1237
             K++N  NG     R +   N+  T+     + S +Q L  S++ D           P   
Sbjct:     5 KKKN--NGGSSTAR-YSAGNKYNTLSNNYAL-SAQQLLNASKIDDIDSMMGFERYVPPQY 60

Query:  1238 NA-IDTENIDRIVDYKGWL 1255
             N   D ++ID+I    GWL
Sbjct:    61 NGRFDAKDIDQIPGRVGWL 79


>UNIPROTKB|G4NHG4 [details] [associations]
            symbol:MGG_03850 "DNA polymerase" species:242507
            "Magnaporthe oryzae 70-15" [GO:0005575 "cellular_component"
            evidence=ND] InterPro:IPR006133 InterPro:IPR006134
            InterPro:IPR006172 InterPro:IPR012337 InterPro:IPR013697
            Pfam:PF00136 Pfam:PF03104 Pfam:PF08490 SMART:SM00486 GO:GO:0005634
            GO:GO:0000166 GO:GO:0003677 GO:GO:0006260 GO:GO:0008270
            SUPFAM:SSF53098 EMBL:CM001236 GO:GO:0003887 KO:K02324
            RefSeq:XP_003720041.1 EnsemblFungi:MGG_03850T0 GeneID:2677352
            KEGG:mgr:MGG_03850 Uniprot:G4NHG4
        Length = 2240

 Score = 3246 (1147.7 bits), Expect = 0., Sum P(3) = 0.
 Identities = 619/1145 (54%), Positives = 816/1145 (71%)

Query:    64 SCIDLYFVSQDGSTFKSKYKFRPYFYAATKEKMEMDVEAYLRRRYESQIAD-IEILEKED 122
             + +D YF+ +DG TFK+  ++ PYF  A ++  E +VE + +R     +   +  +EKED
Sbjct:    96 AALDCYFIEEDGGTFKATVQYDPYFLVAVRKGHEGEVEEWCKRVPGGGVVKKVRRIEKED 155

Query:   123 LDLKNHLSGLHKSYLKISFDTVQQLMDVKKDLLHVVERNQAKFDAAEAYESI-------- 174
             L + NHL G  +++L++SF  VQ LM  +KD++ + ERN+   DA + Y  +        
Sbjct:   156 LKMPNHLLGYRRTFLELSFANVQNLMAARKDIMPIAERNKKNMDAMDTYAEVAATNGDFD 215

Query:   175 -----LTGKREQRPQDFLDC---IVDLREYDVPYHIRFAIDNDVRCGQWYDVSISSTGPL 226
                  L    ++    F D    +VD+REYDVPYH+R  ID ++R G+WY V        
Sbjct:   216 LFDDDLRNDEKRHNASFADASDFLVDIREYDVPYHVRVMIDLNIRVGKWYWVEAKHGVTS 275

Query:   227 LEKRVDLLQRAEVHVCAFDIETTKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGED 286
             +    + L  A+  V A+DIETTKLPLKFPDA  D +MMISYM+DGQG+LI NRE + ED
Sbjct:   276 IVCNEEHLVMADPVVMAYDIETTKLPLKFPDAAIDQVMMISYMIDGQGFLITNREVISED 335

Query:   287 IEDLEYTPKPEFEGYFKVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRA 346
             I D EYTPKPE+ G F + N  +E  LL  +F H++E +P +  TYNGD+FDWPF++ RA
Sbjct:   336 IADFEYTPKPEYPGPFMIFNEPDEKALLERFFLHIKEARPTVIATYNGDFFDWPFVDARA 395

Query:   347 AHHGFKMSEELGFQCDKNQGECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYD 406
             + +G  M  E+G++ D +  + +  ++ H+DCF WV RDSYLPQGS+GLKAVT AKLGYD
Sbjct:   396 SFNGIDMYREIGWRKDTDD-QYKCNYSVHMDCFHWVNRDSYLPQGSRGLKAVTVAKLGYD 454

Query:   407 PLEVNPEDMVRFAKEKPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRK 466
             P E++PE M  +A+E+PQ +A YSVSDAVATYYLYM YVHPFIFSL TI+P+ PD+  RK
Sbjct:   455 PDELDPELMTPYAQERPQTLAEYSVSDAVATYYLYMKYVHPFIFSLCTILPLGPDDTERK 514

Query:   467 GSGTLCEMLLMVQAYKANVICPNKHQSDPEKFYRNHLLESETYIGGHVECLESGVFRSDL 526
             G+GTLCEMLLMVQAY+ N++ PNKH S  E F+  HLL+SETY+GGHVE +E+GVFR+D+
Sbjct:   515 GTGTLCEMLLMVQAYQKNIVLPNKHMSPKESFWEGHLLDSETYVGGHVESIEAGVFRADI 574

Query:   527 PTSFKLDPSAYEQLLNNLDRDLQYAIKVEGKMDLESVSNYDEVKNAIMEKLLRLQEEPIR 586
             P +F +DPSA ++L+ +LD  L+++I VE K D++ V+NY+EV++ I  KLL L++ P R
Sbjct:   575 PVNFAVDPSACDELIRDLDAALKFSITVEEKKDMDDVTNYEEVRDQIKAKLLALRDTPNR 634

Query:   587 EECPLIYHLDVAAMYPNIILTNRLQPPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEIF 646
             +E PLIYHLDVA+MYPNI+ TNRLQP S++++  C ACDFNRPGKTC R+L W WRGE  
Sbjct:   635 QERPLIYHLDVASMYPNIMTTNRLQPDSMISEADCAACDFNRPGKTCDRRLPWAWRGEYL 694

Query:   647 MGKRSDYYHLKKQIESEFVDGT--NGHLSKSFLDLPKMEQQSRLKDRLKKYCQKAYKRVL 704
               KR +Y  ++  +E+E   G   N  + ++F +LP  EQ + ++ RL+ Y QK Y ++ 
Sbjct:   695 PAKRDEYNMIRNALENERFPGKWPNSPM-RTFQELPADEQANLVRKRLQLYSQKVYHKIH 753

Query:   705 DKPVTELREAGICMRENSFYVDTVRSFRDRRYEYKGLNKVWKGKLSEAKASGN-SIKIQE 763
             D   T++REA IC REN FY+DTVR FRDRRY+YKG  KVWKGK    K+SG    ++  
Sbjct:   754 DS-TTKVREAIICQRENPFYIDTVRDFRDRRYDYKGKAKVWKGKTDALKSSGAPGSEVDA 812

Query:   764 AQDMVVLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKI 823
             A+ M++L+DSLQLAHK ILNSFYGYVMRKG+RWYSMEMAGV   TGA IIQ A+ L+E++
Sbjct:   813 AKKMIILFDSLQLAHKVILNSFYGYVMRKGSRWYSMEMAGVTCLTGATIIQLAKELVERL 872

Query:   824 GKPLELDTDGIWCVLPGSFPENXXXXXXXXXXXXXISYPCVMLNVDVARNNTNDQYQTLV 883
             G+PLELDTDGIWC+LP +FPEN             ISYPCVMLN  V    TN QYQTLV
Sbjct:   873 GRPLELDTDGIWCMLPATFPENFAFKLKNGKKLA-ISYPCVMLNHLVHAKFTNHQYQTLV 931

Query:   884 DPVSKTYETHSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIK 943
             D  +  YETHS+ SI FEVDGPYKAM+LP SKEE   +KKRYAVFNDDG+LAELKGFE+K
Sbjct:   932 DADTFKYETHSDNSIFFEVDGPYKAMVLPTSKEEDKNLKKRYAVFNDDGSLAELKGFEVK 991

Query:   944 RRGELKLIKVFQAELFDKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYIS 1003
             RRGELKLIK+FQ ++F  FL G T+ ECYSAVA VANRWLD+LDN+G  +AD EL+D IS
Sbjct:   992 RRGELKLIKIFQQQIFKFFLEGETLAECYSAVAKVANRWLDVLDNKGTTLADEELMDLIS 1051

Query:  1004 ESSTMSKSLADYGEQKSCAVTTARRLSDFLGDTMVKDKGLRCQYIVACEPQGTPVSERAV 1063
             E+ +MSK+L +YG QKS ++TTA+RL+DFLG+ MVKDKGL C++I+   P+G PV+ERAV
Sbjct:  1052 ENRSMSKTLEEYGSQKSTSITTAKRLADFLGEQMVKDKGLNCKFIICARPKGAPVTERAV 1111

Query:  1064 PVAIFETDAEIMKFYLRKWCKTS-SDVGIRSIVDWSYYKQRLSSAIQKIITIPAAMQKVS 1122
             PVAIF  D +  + YL+KW K    D   R+++DW+YY +RL S IQK+ITIPAA+QKV 
Sbjct:  1112 PVAIFSADEDTKRLYLKKWLKEEPQDTDPRALLDWAYYAERLGSVIQKLITIPAALQKVR 1171

Query:  1123 NPVPRVVHPDWLYKKVREKEDKFRQRKLVDIFSSLKKDDFLNKTCNAETNLMDENVEDLE 1182
             NPVPRV HPDWL +++  K+DK +Q+K+ D+F+S    + +       TN+    + DLE
Sbjct:  1172 NPVPRVPHPDWLQRRINAKDDKMKQKKMTDLFASKGPLEDI-------TNISSSRLNDLE 1224

Query:  1183 DFPKK 1187
             DF  K
Sbjct:  1225 DFGNK 1229

 Score = 625 (225.1 bits), Expect = 0., Sum P(3) = 0.
 Identities = 148/547 (27%), Positives = 273/547 (49%)

Query:  1448 ILWISDDGVPDLGGTSEEDECFA-DEVHQPVLTYPGAYRKVSVELKIHHLSVNALLKSNQ 1506
             +LW S    PD  G  ++D     D V  P +  PG +  V +++++ +L++N +L S+ 
Sbjct:  1694 VLWWSPGPRPDHAGYEKDDVAGPLDVVQMPAVNNPGTFASVCIDIEVRNLAINTILTSSL 1753

Query:  1507 VNEMEGGGLFGFD--QDMNSGPYNNELCGFDETTSSAPAFRVVKQLIQRCLTDAVTSGNV 1564
             +NE+EG     F+   D   G    E+   +   ++A   +V++++++    +A   G+ 
Sbjct:  1754 INELEGAESISFNPASDATGGDGAGEILHSENAFANA-GVQVLREMVKSWWAEACR-GST 1811

Query:  1565 FADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEFRKLGATIIFANFSKVI 1624
              AD ++QHL RW+ SP S L+D  LH  +  + +K F  L+++FR++G+ ++FA+ ++++
Sbjct:  1812 MADVMVQHLVRWVESPDSFLYDRALHYYVQIMSRKAFQQLMSDFRRVGSQVVFASANRLL 1871

Query:  1625 IDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLFMDQYNYGGIPARADES 1684
             + T K ++  A AY   +LK+++++ LF +I+LE   +W  L++ DQ+NYGG      E 
Sbjct:  1872 LQTTKGEVGNAYAYSQYILKSIKSKPLFHFIDLEIKEYWDYLVWYDQFNYGG--KACQEV 1929

Query:  1685 LDDDSQ-VDIVSSWNIAEYLPKEIQDHFVLVVSEFMYIPWKHAQKLAASRASLQEGSSCT 1743
             ++ ++Q +D++  W +A +LP  +Q  F   V EF+ +   H ++ AA   S    +   
Sbjct:  1930 VEAETQSLDMIMHWQMATFLPLRLQSVFKEWVIEFIQLMHSH-KRPAAIDGSTPRATQLP 1988

Query:  1744 PSITVAAAENFESHIV--QYVKGEISSYFTGKLLSIVRDAIHHMKKMNNDQHNSPGVMQT 1801
                    +E+ E HI+  +  +  +     G + +  R+ +H    ++ D    PG    
Sbjct:  1989 VRSNNGLSEDGEGHIILGKAFERPLKREIAGLIAAQKRELLHPELAVDYDFPVLPG--SH 2046

Query:  1802 AANIHKVDAPLEFIKHVCAAFALDQNVQHDVLVMRKNLLKYVRVREFAPEAEFRDPCPSF 1861
              +N+H   A LE +K +    +LD+N+  +  ++RK LL  + VREF+ EA F++P  S 
Sbjct:  2047 LSNLHPSTAVLELVKMLMQVLSLDKNIALEARLVRKELLAMLDVREFSKEATFQNPSESL 2106

Query:  1862 ILPNVICSYCNXXXXXXXXXX---------XXXXXQDWHCAMPQCGQPYDREVMENALLQ 1912
              LP V C  C                         + W C    C   YDR  +E  LL 
Sbjct:  2107 KLPQVSCDNCTVARDLDLCRDEDLLPPPGEAQGQQRPWRCTF--CESEYDRNGLEEVLLA 2164

Query:  1913 IVRQRERLYHLQDLVCIRCNQVKAAHLAEQCACAGSFRCKEDASDFRSKMQIFLNIANRQ 1972
              V      +  QDL C +C  ++     E C C+G +       +   +M+++ N+A   
Sbjct:  2165 QVEAVVVEWTTQDLKCAKCGALRVNEFMEHCTCSGDWVATVKRDEVVRRMKVYRNVAKFY 2224

Query:  1973 GFQLLQE 1979
             G ++L++
Sbjct:  2225 GLKMLED 2231

 Score = 271 (100.5 bits), Expect = 2.0e-91, Sum P(3) = 2.0e-91
 Identities = 64/208 (30%), Positives = 112/208 (53%)

Query:    15 KKQKLIRSAEEELEAKLGYDLFSEGDKRLGWLLTFASSSLEDEDTRKV--YSCIDLYFVS 72
             +K + ++ A + ++  +G+  +  G KR GWL+   S+S+ED+        + +D YF+ 
Sbjct:    46 EKWERVKLAHD-IDENMGFGRYDAGRKREGWLVNVQSTSIEDDRVPGGGGRAALDCYFIE 104

Query:    73 QDGSTFKSKYKFRPYFYAATKEKMEMDVEAYLRRRYESQIAD-IEILEKEDLDLKNHLSG 131
             +DG TFK+  ++ PYF  A ++  E +VE + +R     +   +  +EKEDL + NHL G
Sbjct:   105 EDGGTFKATVQYDPYFLVAVRKGHEGEVEEWCKRVPGGGVVKKVRRIEKEDLKMPNHLLG 164

Query:   132 LHKSYLKISFDTVQQLMDVKKDLLHVVERNQAKFDAAEAYESILTGKREQRPQDFLDCIV 191
               +++L++SF  VQ LM  +KD++ + ERN+   DA + Y  +     +    D  D   
Sbjct:   165 YRRTFLELSFANVQNLMAARKDIMPIAERNKKNMDAMDTYAEVAATNGDF---DLFDD-- 219

Query:   192 DLREYDVPYHIRFAIDNDVRCG-QWYDV 218
             DLR  +  ++  FA  +D     + YDV
Sbjct:   220 DLRNDEKRHNASFADASDFLVDIREYDV 247

 Score = 180 (68.4 bits), Expect = 0., Sum P(3) = 0.
 Identities = 79/311 (25%), Positives = 139/311 (44%)

Query:  1126 PRVVHPDWLYKKVREKEDKFRQRKLVDIFSSLKK----------DDFLNKTCNAETNLMD 1175
             PR +  DW Y    E+     Q KL+ I ++L+K           D+L +  NA+ + M 
Sbjct:  1140 PRALL-DWAY--YAERLGSVIQ-KLITIPAALQKVRNPVPRVPHPDWLQRRINAKDDKMK 1195

Query:  1176 EN-VEDL--EDFPKKRRNSVNGPRPIVRCFEVNNEQKTVKTTDQVDSLRQQLEPSEVSDQ 1232
             +  + DL     P +   +++  R +    +  N+    KT D   +  Q++  S+  + 
Sbjct:  1196 QKKMTDLFASKGPLEDITNISSSR-LNDLEDFGNKLLQPKTVDAAITASQKVSTSKRKEP 1254

Query:  1233 QPSSQNAIDTENIDRIV-----DYKGWLELKKRKWKDNLDRRKKQKLGSLRASHQANGVS 1287
             +P+   A    ++ +++     DY  +L+ +K KWK        QK   +R  H      
Sbjct:  1255 EPAVP-ADPFASLPKVMPDPSKDYPAFLQYQKLKWK-------LQKQARIRRRHL----- 1301

Query:  1288 ESLGDMINHKEAQRRTGVGSYFRRQETAMTRCHWQIIQLVPSSQSGVFLAWVVVEGIMVR 1347
                GD    +       +   FR Q     R  WQ++QL  +   G+  A+V+++  +  
Sbjct:  1302 --FGD----RRGNANNNIQQTFRNQAEITFRNTWQLLQLKLTDNPGIVSAYVLIDNKIHS 1355

Query:  1348 IPITVPRLFYLNSK-----DPIVEKFPGRRVNKTLPHGRRSFNLIEVMIDEDQFRKESKK 1402
             + I VPR  +LN K     D  VE     +V+ TLP+G  S +L ++++DE+ +  ES+K
Sbjct:  1356 VKIKVPRQVFLNLKSRELPDVEVEGCQVEQVSHTLPNGHSSVHLFKLVVDEEVYFAESEK 1415

Query:  1403 LAALLADPEVE 1413
              + L   P VE
Sbjct:  1416 FSLLFNHPSVE 1426

 Score = 62 (26.9 bits), Expect = 5.0e-79, Sum P(3) = 5.0e-79
 Identities = 45/168 (26%), Positives = 69/168 (41%)

Query:  1246 DRIVDYKGWLELKKRKWKDNLDRRKKQKL-GS-LRASHQANGVSESLGDMINHKEAQRRT 1303
             DR  DYKG    K + WK   D  K     GS + A+ +   + +SL   + HK      
Sbjct:   781 DRRYDYKG----KAKVWKGKTDALKSSGAPGSEVDAAKKMIILFDSL--QLAHKVILNSF 834

Query:  1304 -GV----GSYFRRQETAMTRCHW--QIIQLVPS--SQSGVFLAWVVVEGIMVRIPITVPR 1354
              G     GS +   E A   C     IIQL      + G  L  +  +GI   +P T P 
Sbjct:   835 YGYVMRKGSRWYSMEMAGVTCLTGATIIQLAKELVERLGRPLE-LDTDGIWCMLPATFPE 893

Query:  1355 LFYLNSKD--PIVEKFPGRRVNKTLPHGRRSFNLIEVMIDEDQFRKES 1400
              F    K+   +   +P   +N  L H + + +  + ++D D F+ E+
Sbjct:   894 NFAFKLKNGKKLAISYPCVMLNH-LVHAKFTNHQYQTLVDADTFKYET 940

 Score = 56 (24.8 bits), Expect = 0., Sum P(3) = 0.
 Identities = 26/102 (25%), Positives = 41/102 (40%)

Query:  1350 ITVPRLFYLNSKDPIVEKFPGRRVNK---TLPHGRRSFNLIEVMIDEDQFRKESKKLAAL 1406
             +T  R  +L   D +V+K     VN     +   +R+  L E+ I ++ F     K    
Sbjct:  1569 VTTRRKAFLEISD-MVKKMRKDEVNPIMMVIQSSQRNMLLHEIPILQE-FPVLPLKFDP- 1625

Query:  1407 LADPEVEVLGWQQNAAKIGMQRCAASSQWFNERISLARYAHI 1448
              AD  +  LGWQ   A+  +        W     +LARY  +
Sbjct:  1626 -ADSSLPPLGWQSVVARRLVNHYLGLGSWILHLTALARYGDV 1666

 Score = 52 (23.4 bits), Expect = 0., Sum P(2) = 0.
 Identities = 20/96 (20%), Positives = 40/96 (41%)

Query:  1320 HWQIIQLVPSSQSGVFLAWVVVEGIMVRIPITVPRLFYLNSKDPIVEKFPGRRVNKTLPH 1379
             HWQ+   +P     VF  WV+     +++  +  R   ++   P   + P R  N     
Sbjct:  1942 HWQMATFLPLRLQSVFKEWVIE---FIQLMHSHKRPAAIDGSTPRATQLPVRSNNGLSED 1998

Query:  1380 GRRSFNLIEVMIDEDQFRKESKKLAALLADPEVEVL 1415
             G        +++ +   R   +++A L+A  + E+L
Sbjct:  1999 GEG-----HIILGKAFERPLKREIAGLIAAQKRELL 2029

 Score = 40 (19.1 bits), Expect = 3.7e-54, Sum P(2) = 3.7e-54
 Identities = 10/22 (45%), Positives = 12/22 (54%)

Query:  1451 ISDDGVPDLGGTSEEDECFADE 1472
             I DD VP  GG +  D  F +E
Sbjct:    84 IEDDRVPGGGGRAALDCYFIEE 105

 Score = 37 (18.1 bits), Expect = 6.8e-54, Sum P(3) = 6.8e-54
 Identities = 14/66 (21%), Positives = 29/66 (43%)

Query:    86 PYFYAATKEKMEMDVEAYLRRRYESQIADIEILEKEDLDLKNHLSGLHKSYLKISFDTVQ 145
             P F    K K ++  +A +RRR+        +      +  N++    ++  +I+F    
Sbjct:  1278 PAFLQYQKLKWKLQKQARIRRRH--------LFGDRRGNANNNIQQTFRNQAEITFRNTW 1329

Query:   146 QLMDVK 151
             QL+ +K
Sbjct:  1330 QLLQLK 1335


>CGD|CAL0000768 [details] [associations]
            symbol:POL2 species:5476 "Candida albicans" [GO:0008622
            "epsilon DNA polymerase complex" evidence=IEA] [GO:0003887
            "DNA-directed DNA polymerase activity" evidence=IEA] [GO:0003690
            "double-stranded DNA binding" evidence=IEA] [GO:0006270 "DNA
            replication initiation" evidence=IEA] [GO:0006348 "chromatin
            silencing at telomere" evidence=IEA] [GO:0033260 "DNA replication
            involved in S phase" evidence=IEA] [GO:0007090 "regulation of S
            phase of mitotic cell cycle" evidence=IEA] [GO:0000731 "DNA
            synthesis involved in DNA repair" evidence=IEA] [GO:0007064
            "mitotic sister chromatid cohesion" evidence=IEA] [GO:0006303
            "double-strand break repair via nonhomologous end joining"
            evidence=IEA] [GO:0000723 "telomere maintenance" evidence=IEA]
            InterPro:IPR006133 InterPro:IPR006134 InterPro:IPR006172
            InterPro:IPR012337 InterPro:IPR013697 Pfam:PF00136 Pfam:PF03104
            Pfam:PF08490 SMART:SM00486 CGD:CAL0000768 GO:GO:0005634
            GO:GO:0000166 GO:GO:0003677 GO:GO:0006260 GO:GO:0008270
            SUPFAM:SSF53098 GO:GO:0003887 eggNOG:COG0417 KO:K02324
            EMBL:AACQ01000150 EMBL:AACQ01000149 RefSeq:XP_712655.1
            RefSeq:XP_712675.1 STRING:Q59SM7 GeneID:3645702 GeneID:3645733
            KEGG:cal:CaO19.2365 KEGG:cal:CaO19.9901 Uniprot:Q59SM7
        Length = 2211

 Score = 3216 (1137.1 bits), Expect = 0., Sum P(4) = 0.
 Identities = 624/1159 (53%), Positives = 823/1159 (71%)

Query:    15 KKQKLIRSAEEELEAKLGYDLFSEGDK-----RLGWLLTFASSSLEDEDTRKVYSCIDLY 69
             +K++L+   +  +++ +G+D    G+      R GWL+   ++++  +D    YS +D Y
Sbjct:    60 QKKELVERIDH-IDSIMGFDRLEHGENDGNKPRKGWLINMHATTIPTDDYLAGYSGVDYY 118

Query:    70 FVSQDGSTFKSKYKFRPYFYA-ATKEKMEMDVEAYLRRRYES-QIADIEILEKEDLDLKN 127
             F+ ++G +FK+  +F PYF+        E +VE ++R+  E+  +     + KEDL L N
Sbjct:   119 FLDEEGGSFKATLQFDPYFFVDVLPGDHESEVEEWMRKYLETANVKSYSRVIKEDLKLPN 178

Query:   128 HLSGLHKSYLKISFDTVQQLMDVKKDLLHVVERNQAKFDAAEAYESILTGKREQRPQDFL 187
             HL GL K+ +K+SF  +Q L+  ++ L  +++ NQ K ++   Y    T K  +   D  
Sbjct:   179 HLLGLQKTLIKLSFHNIQDLLAARRLLSPIIKDNQLKKESRNMY----TFKEIETIMDPS 234

Query:   188 DCIVDLREYDVPYHIRFAIDNDVRCGQWYDVSIS-STGPLLEKRVDLLQRAEVHVCAFDI 246
               I D+REYDVPYH+R +ID +VR G+WYDV    S    +E + + +  A+  V AFDI
Sbjct:   235 VYIDDIREYDVPYHVRVSIDRNVRVGKWYDVYAKHSKVDFVEDK-EKIAFADPVVLAFDI 293

Query:   247 ETTKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTN 306
             ETTK PLKFPDA  D IMMISYM+DG+G+LI NRE + EDI+D EYTPKPE+ G F + N
Sbjct:   294 ETTKAPLKFPDAKIDQIMMISYMIDGEGFLITNREIISEDIDDFEYTPKPEYPGLFTIFN 353

Query:   307 VNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDKNQG 366
               +E  +L+ +F H+++VKP +  T+NGD+FDWPF+E R   H   M EE+GF  D N+G
Sbjct:   354 EPDEKHVLKRFFEHIRDVKPTVIATFNGDFFDWPFVENRTRFHDMDMFEEIGFAKD-NEG 412

Query:   367 ECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQMM 426
             E ++K+  H+DCF WVKRDSYLPQGSQGLKAVT AKLGY+P E++PE M  +A +KPQ++
Sbjct:   413 EYKSKYCVHMDCFRWVKRDSYLPQGSQGLKAVTTAKLGYNPTELDPELMTPYAYDKPQLL 472

Query:   427 ASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVI 486
             + YSVSDAVATYYLY  YVHPFIFSL TIIP++PDEVLRKG+GTLCEMLL VQAY+ N++
Sbjct:   473 SEYSVSDAVATYYLYYKYVHPFIFSLCTIIPLNPDEVLRKGTGTLCEMLLSVQAYEGNIL 532

Query:   487 CPNKHQSDP-EKFYRNHLLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQLLNNLD 545
              PNKH SDP E+FY  HLLESETY+GGHVE LE+GVFRSD+PT FK+DP+A ++LL NL 
Sbjct:   533 LPNKH-SDPIERFYEGHLLESETYVGGHVESLEAGVFRSDIPTHFKIDPTAIDELLGNLH 591

Query:   546 RDLQYAIKVEGKMDLESVSNYDEVKNAIMEKLLRLQEEPIREECPLIYHLDVAAMYPNII 605
               +++ I+VE    +E V N+DE+   I   LL L+  P R+E PLIYH+DVA+MYPNI+
Sbjct:   592 NSIKFCIEVENGKKMEDVENFDEIYTQIESSLLELKNNPSRQEKPLIYHVDVASMYPNIM 651

Query:   606 LTNRLQPPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYYHLKKQIESEFV 665
              +NRLQP S+ ++E C ACDFNRPGK C R+L W WRGE +  + ++Y  +K+ +++E  
Sbjct:   652 TSNRLQPDSMKSEEDCAACDFNRPGKNCDRRLPWAWRGEYYPAEMNEYNMIKRTLQNETF 711

Query:   666 DGTNGHLS-KSFLDLPKMEQQSRLKDRLKKYCQKAYKRVLDKPVTELREAGICMRENSFY 724
              G    L  ++F +L   EQ +++K R+  Y +K Y RV    V   REA IC REN FY
Sbjct:   712 PGARPWLPPRTFDELSYAEQAAKIKKRISDYSRKVYHRVKSSKVVT-REAIICQRENPFY 770

Query:   725 VDTVRSFRDRRYEYKGLNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHKCILNS 784
             VDTVRSFRDRRYE+KGL KVWKGK+ +  AS ++I   EA+ MVVLYDSLQLAHK ILNS
Sbjct:   771 VDTVRSFRDRRYEFKGLAKVWKGKVGKI-ASNDTIARDEAKKMVVLYDSLQLAHKVILNS 829

Query:   785 FYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLPGSFPE 844
             FYGYVMRKG+RWYSMEMAGV   TGA IIQ AR L+E+IG+PLELDTDGIWC+LP SFPE
Sbjct:   830 FYGYVMRKGSRWYSMEMAGVTCLTGATIIQMARALVERIGRPLELDTDGIWCILPKSFPE 889

Query:   845 NXXXXXXXXXXXXXISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEFEVDG 904
             N             + YPC MLN  V    TN QYQ LVDP +  Y+T S+ SI FEVDG
Sbjct:   890 NFNLKCKDGKKIF-LEYPCSMLNYLVHERFTNHQYQDLVDPETFKYKTRSDNSIFFEVDG 948

Query:   905 PYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFLH 964
             PYKAMILP SKEEG  +KKRYAVFN+DG+LAELKGFE+KRRGEL+LIK FQ+++F  FL 
Sbjct:   949 PYKAMILPTSKEEGKGLKKRYAVFNEDGSLAELKGFELKRRGELQLIKNFQSDIFKLFLE 1008

Query:   965 GSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLADYGEQKSCAVT 1024
             G T++ CY AVA VAN WLD+LD +G  + D +LI+ I E+ +MSKSLADYG+QKS ++T
Sbjct:  1009 GDTLDTCYQAVATVANNWLDVLDTKGGMLEDEDLIELICENRSMSKSLADYGDQKSTSIT 1068

Query:  1025 TARRLSDFLGDTMVKDKGLRCQYIVACEPQGTPVSERAVPVAIFETDAEIMKFYLRKWCK 1084
             TA+RL +FLG+ MVKD GL  +YI++ +P G+PV+ERA+PV+IF +D +  + +L+KW K
Sbjct:  1069 TAKRLGEFLGEEMVKDAGLATKYIISAKPIGSPVTERAIPVSIFSSDKK--EIFLKKWLK 1126

Query:  1085 TSS--DVGIRSIVDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLYKKVREKE 1142
               S      R ++DW+YY +RL+S +QKIITIPAA+Q V NPVPRV HPDWL KKV+  E
Sbjct:  1127 DPSLNKFSPRDVIDWNYYYERLASVVQKIITIPAALQDVKNPVPRVPHPDWLQKKVKNSE 1186

Query:  1143 DKFRQRKLVDIFSSLKKDD 1161
             D  +Q+ + + F    K+D
Sbjct:  1187 DIMQQKSISNFFKKTTKED 1205

 Score = 615 (221.5 bits), Expect = 0., Sum P(4) = 0.
 Identities = 162/548 (29%), Positives = 282/548 (51%)

Query:  1448 ILWISDDGVPDLGGTSEEDECFADEVHQPVLTYPGAYRKVSVELKIHHLSVNALLKSNQV 1507
             +LW S + +PDLGG   +     D +  P +  P  Y    +E++I  L++N +L S  +
Sbjct:  1677 VLWWSPNPLPDLGGFEMDRMIDFDSLAFPTINNPEIYETACLEVEIGTLTINTILTSALI 1736

Query:  1508 NEMEGGGLFGFDQDMNSGPYNNELCGFDETTSSAPAFRVVKQLIQRCLTDAVTSGNVFAD 1567
             NE EG  L   D++M+    NN    F E + S+PA  +++ +++    DA+ S N+ AD
Sbjct:  1737 NEAEGTDLA--DENMHFDN-NNGASTFAEDSFSSPALSILRSMVKDWWDDAL-SNNINAD 1792

Query:  1568 AILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEFRKLGATIIFANFSKVIIDT 1627
             +I+  L  W+    S L+DP LH  +H +  K    L++EF+++GA +IFAN +K++I T
Sbjct:  1793 SIMNTLVTWVQRNDSMLYDPSLHYHVHNLTSKALLQLISEFKRMGAQVIFANRNKMLIQT 1852

Query:  1628 GKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLFMDQYNYGGIPARADESLDD 1687
              K  +  + AY   +LKA +++ LF +++L  V +W  L++MD++NYGG      E +++
Sbjct:  1853 SKISVENSYAYGQYILKAARSKPLFNFLDLRIVKYWDILIWMDEFNYGG--RSCTEIVNE 1910

Query:  1688 DSQVDIV--SSWNIAEYLPKEIQDHFVLVVSEFMYIPWKHAQKLAASRASLQEGSSC-TP 1744
             + Q ++V  + W++ ++LP   Q+ F     +++ I +  A     +   L +G+   TP
Sbjct:  1911 EMQ-NLVPENHWHLQKFLPIIFQNEF----EDWLVI-FLDALTKYKNENLLGKGAQANTP 1964

Query:  1745 SIT--VAAAENFESHIVQYVKGEISSYFTGKLLSIVRDAIHHMKKMNNDQHNS---PGVM 1799
              +T  V   +  +    Q V+ E   +  G + +  +  +  M+K+   Q  +   P   
Sbjct:  1965 RVTQIVHILKGQKKLQAQEVEEEDDDH--GVIETFKKPILRRMEKLYRRQLEAILNPEFK 2022

Query:  1800 Q-----TAAN--IHKVDAPLEFIKHVCAAFALDQNVQHDVLVMRKNLLKYVRVREFAPEA 1852
             Q     T A   +H  +  LE +K +C  FAL +    +V +++K LL    VR+F+ +A
Sbjct:  2023 QEYEFPTLAGSYLHMKNPALELVKFLCHVFALSEKRSKEVRILKKELLLIFDVRDFSKDA 2082

Query:  1853 EFRDPCPSFILPNVICSYCNXXXXXXXXXXXXXXXQDWHCAMPQCGQPYDREVMENALLQ 1912
              FRDPC S  LP+VIC YCN                 W+C    C + Y++  +E    +
Sbjct:  2083 TFRDPCTSLKLPHVICDYCNHIRDIDLCREEEINI--WNCL--NCHKAYNKIALEE---E 2135

Query:  1913 IVRQRERLY---HLQDLVCIRCNQVKAAHLAEQCACAGSFRCKEDASDFRSKMQIFLNIA 1969
             I+ Q  +L+   + QDL C +CNQ++  ++   C C+G++    D      + Q F+N+A
Sbjct:  2136 IINQFNKLFVKFYGQDLKCNKCNQIRQNNMDLHCKCSGNWIETVDYHAIEKQFQTFVNVA 2195

Query:  1970 NRQGFQLL 1977
                  QLL
Sbjct:  2196 KFYNLQLL 2203

 Score = 93 (37.8 bits), Expect = 0., Sum P(4) = 0.
 Identities = 60/261 (22%), Positives = 108/261 (41%)

Query:  1161 DFLNKTCNAETNLMDENVEDLEDFPKKRRNSVNGPRPIVRCFEVNNEQKTVKTTDQVDSL 1220
             D+L K      ++M +  + + +F KK        + I    EV+      K        
Sbjct:  1176 DWLQKKVKNSEDIMQQ--KSISNFFKKTTKEDIKLKDIEDFGEVDASVPKGKVVKVTSRK 1233

Query:  1221 RQQLEPSEVSDQQPSSQN-AIDTENIDRIV-DYKGWLELKKRKWK-DNLDRRKKQKLGSL 1277
             R+  + + V D +   +N AI       +  DY+G+L+ +K KWK     R ++++L   
Sbjct:  1234 RKSGKANMVEDAEEDEKNQAILNGPCPSMTEDYQGFLQYQKAKWKVQQAGRERRRRLFG- 1292

Query:  1278 RASHQANGVSESLGDMINHKEAQRRTGVGSYFRRQET-AMTRCHWQIIQLVPSSQSGVFL 1336
                  AN  SES         +QR T  G + +R E  A T       +L P+ + G   
Sbjct:  1293 -----AN--SES---------SQRSTVGGMFRKRAENIAGTNWEILEYKLDPT-KPGDLK 1335

Query:  1337 AWVVVEGIMVRIPITVPRLFYLNSKDPIVEK--FPGRRV---NKTLPHGRRSFNLIEVMI 1391
              +V     +      VP+  Y + K  + ++   PG  +   N  LP+G    NL ++ +
Sbjct:  1336 VYVRAGDKVHTFNFHVPKKVYASFKTKLSQRKSIPGCEIEESNAILPNGHDGTNLYKLTM 1395

Query:  1392 DEDQFRKESKKLAALLADPEV 1412
              +  F+++   + +LL D  +
Sbjct:  1396 AQSVFQEQMSDVDSLLQDSNI 1416

 Score = 54 (24.1 bits), Expect = 0., Sum P(3) = 0.
 Identities = 26/108 (24%), Positives = 44/108 (40%)

Query:  1471 DEVHQPVLTYPGAYRKVSVELKIHHLSVNALLKSNQV----NEMEGGGLFGFDQDMNSGP 1526
             D+V   V+ YP    ++S ++K +H S     K NQV    +E      F   Q     P
Sbjct:  1535 DKVSN-VVNYPA---EMSFDVKYYHESAKLFKKLNQVIGKIHESRSNKAFLAIQS----P 1586

Query:  1527 YNNELCGFDETTSSAPAFRVVKQLIQRCLTDAVTSGNVFADAILQHLY 1574
             Y++ +     TT   P    +K  I      AV   ++ +  ++ H +
Sbjct:  1587 YSSRILNVLNTTDDFPT---IKMNISELSLPAVGWQSLISKRVINHYF 1631

 Score = 51 (23.0 bits), Expect = 0., Sum P(4) = 0.
 Identities = 13/66 (19%), Positives = 27/66 (40%)

Query:  1383 SFNLIEVMIDEDQFRKESKKLAALLADPEVEVLGWQQNAAKIGMQRCAASSQWFNERISL 1442
             S  ++ V+   D F      ++ L     +  +GWQ   +K  +        W    ++ 
Sbjct:  1588 SSRILNVLNTTDDFPTIKMNISEL----SLPAVGWQSLISKRVINHYFVLGSWIKNLVAF 1643

Query:  1443 ARYAHI 1448
             A+YA++
Sbjct:  1644 AKYANV 1649

 Score = 51 (23.0 bits), Expect = 2.9e-54, Sum P(2) = 2.9e-54
 Identities = 16/62 (25%), Positives = 32/62 (51%)

Query:  1342 EGIMVRIPITVPRLFYLNSKD--PIVEKFPGRRVNKTLPHGRRSFNLIEVMIDEDQFRKE 1399
             +GI   +P + P  F L  KD   I  ++P   +N  L H R + +  + ++D + F+ +
Sbjct:   877 DGIWCILPKSFPENFNLKCKDGKKIFLEYPCSMLNY-LVHERFTNHQYQDLVDPETFKYK 935

Query:  1400 SK 1401
             ++
Sbjct:   936 TR 937

 Score = 47 (21.6 bits), Expect = 0., Sum P(4) = 0.
 Identities = 37/148 (25%), Positives = 63/148 (42%)

Query:  1151 VDIFSSLKKDDFLNKTCNAETNLMDENVEDLEDFPKKRRNSVNGPRPIVRCFEVNNEQKT 1210
             V IFSS KK+ FL K    + +L   +  D+ D+        +  + I+       + K 
Sbjct:  1109 VSIFSSDKKEIFLKKWLK-DPSLNKFSPRDVIDWNYYYERLASVVQKIITIPAALQDVKN 1167

Query:  1211 -VKTTDQVDSLRQQLEPSEVSDQQPSSQNAID-TENID-RIVDYKGWLELKKRKWKDNLD 1267
              V      D L+++++ SE   QQ S  N    T   D ++ D + + E+     K  + 
Sbjct:  1168 PVPRVPHPDWLQKKVKNSEDIMQQKSISNFFKKTTKEDIKLKDIEDFGEVDASVPKGKVV 1227

Query:  1268 RRKKQKLGSLRASHQANGVSESLGDMIN 1295
             +   +K    R S +AN V ++  D  N
Sbjct:  1228 KVTSRK----RKSGKANMVEDAEEDEKN 1251

 Score = 43 (20.2 bits), Expect = 0., Sum P(3) = 0.
 Identities = 14/36 (38%), Positives = 17/36 (47%)

Query:  1621 SKVIIDTG---KFDLSAAKAYCDSLLKALQTRELFE 1653
             S+ IID G   KFD +   A    L     TREL +
Sbjct:  1428 SRAIIDLGNTVKFDDTRVGALGKGLKTGFNTRELIK 1463

 Score = 38 (18.4 bits), Expect = 0., Sum P(3) = 0.
 Identities = 6/22 (27%), Positives = 11/22 (50%)

Query:  1320 HWQIIQLVPSSQSGVFLAWVVV 1341
             HW + + +P      F  W+V+
Sbjct:  1920 HWHLQKFLPIIFQNEFEDWLVI 1941

 Score = 38 (18.4 bits), Expect = 2.0e-52, Sum P(3) = 2.0e-52
 Identities = 16/38 (42%), Positives = 20/38 (52%)

Query:   530 FKLDPSAYEQLL-NNLDRDLQYAIKVEGKMD-LESVSN 565
             F L PSA  Q L NN+ +   Y    E K + L+ VSN
Sbjct:  1504 FVLKPSANAQELPNNIHKI--YREIFESKREKLDKVSN 1539


>POMBASE|SPBC25H2.13c [details] [associations]
            symbol:cdc20 "DNA polymerase epsilon catalytic subunit
            Pol2" species:4896 "Schizosaccharomyces pombe" [GO:0000723
            "telomere maintenance" evidence=IMP] [GO:0003677 "DNA binding"
            evidence=IEA] [GO:0003887 "DNA-directed DNA polymerase activity"
            evidence=IMP] [GO:0005634 "nucleus" evidence=IC] [GO:0006270 "DNA
            replication initiation" evidence=IMP] [GO:0007090 "regulation of S
            phase of mitotic cell cycle" evidence=IMP] [GO:0008270 "zinc ion
            binding" evidence=IEA] [GO:0008622 "epsilon DNA polymerase complex"
            evidence=TAS] [GO:0010964 "regulation of chromatin silencing by
            small RNA" evidence=IMP] [GO:0031261 "DNA replication preinitiation
            complex" evidence=IC] [GO:0043234 "protein complex" evidence=EXP]
            [GO:0043596 "nuclear replication fork" evidence=IC] [GO:0051539 "4
            iron, 4 sulfur cluster binding" evidence=IEA] [GO:0071169
            "establishment of protein localization to chromatin" evidence=IPI]
            [GO:0000075 "cell cycle checkpoint" evidence=IMP]
            InterPro:IPR006133 InterPro:IPR006134 InterPro:IPR006172
            InterPro:IPR012337 InterPro:IPR013697 Pfam:PF00136 Pfam:PF03104
            Pfam:PF08490 PROSITE:PS00116 SMART:SM00486 PomBase:SPBC25H2.13c
            GO:GO:0000166 GO:GO:0046872 GO:GO:0003677 EMBL:CU329671
            GO:GO:0008270 GenomeReviews:CU329671_GR GO:GO:0051539 GO:GO:0031261
            GO:GO:0006270 SUPFAM:SSF53098 GO:GO:0000723 GO:GO:0007090
            GO:GO:0010964 GO:GO:0008622 GO:GO:0003887 eggNOG:COG0417 KO:K02324
            OMA:QEESQDL HOGENOM:HOG000196287 OrthoDB:EOG4V9XZP EMBL:D89223
            PIR:T40008 PIR:T43044 RefSeq:NP_596354.1 ProteinModelPortal:P87154
            DIP:DIP-36490N STRING:P87154 EnsemblFungi:SPBC25H2.13c.1
            GeneID:2540627 KEGG:spo:SPBC25H2.13c NextBio:20801752 GO:GO:0071169
            Uniprot:P87154
        Length = 2199

 Score = 3200 (1131.5 bits), Expect = 0., Sum P(5) = 0.
 Identities = 615/1176 (52%), Positives = 812/1176 (69%)

Query:    24 EEELEAKLGYDLFSEGDKRLGWLLTFASSSLEDEDTRKVYSCIDLYFVSQDGSTFKSKYK 83
             + E++  +G+D +  G  R  WLL    + +E        S +D YF+  DG TF+    
Sbjct:    51 KNEIDRMMGFDSYEGGQPREAWLLNVHPTVIESTKGNSTLSAVDFYFIQDDGDTFRCTIP 110

Query:    84 FRPYFYAATKEKMEMDVEAYLRRRYESQIADIEILEKEDLDLKNHLSGLHKSYLKISFDT 143
             + PYFY A +E  E  V+ YL++++   I     + KEDL LKNH+ G  K Y+K+ FD 
Sbjct:   111 YSPYFYIAAREGKEALVDDYLKKKFVGLIKSTTRIFKEDLQLKNHIVGYQKLYIKLVFDN 170

Query:   144 VQQLMDVKKDLLHVVERNQAKFDAAEAYESI----LTGKREQRPQDFLDCIVDLREYDVP 199
             +  L  V+K L+  V+ N ++ DA +AY ++    L G  E   +D L+ ++D+REYDVP
Sbjct:   171 LNDLQAVRKSLMSAVKANSSQQDAVDAYTNLSSENLNGIIENAFEDPLNHVLDIREYDVP 230

Query:   200 YHIRFAIDNDVRCGQWYDVSISSTGPLLEKRVDLLQRAEVHVCAFDIETTKLPLKFPDAD 259
             YH R  ID ++R GQWY VS       +      ++RAE  + AFDIETTKLPLKFPD+ 
Sbjct:   231 YHSRTLIDLNIRVGQWYTVSYHEGHVQISLLASRIERAEPTIMAFDIETTKLPLKFPDSS 290

Query:   260 YDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNVNNEIELLRLWFA 319
             +D IMMISYM+DGQG+LI NRE + ++IED  YTP+ EFEG F + N  +E+ LL  +F 
Sbjct:   291 FDKIMMISYMIDGQGFLITNREIISQNIEDFHYTPREEFEGPFIIFNEPDEVGLLHRFFK 350

Query:   320 HMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDKNQGECRAKFACHLDCF 379
             H++  KP + VTYNGD+FDWPF++ RAA HG  ++EE GF  D  + E ++ +  H+D F
Sbjct:   351 HIRSAKPSVIVTYNGDFFDWPFVDARAAFHGLNLTEETGFFRDA-EDEYKSSYCSHMDAF 409

Query:   380 AWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQMMASYSVSDAVATYY 439
              WVKRDSYLPQGSQGLKAVT +KLGY+P+E++PE M  +A EKPQ++A YSVSDAVATY+
Sbjct:   410 RWVKRDSYLPQGSQGLKAVTVSKLGYNPIELDPELMTPYASEKPQVLAQYSVSDAVATYF 469

Query:   440 LYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVICPNKHQSDPEKFY 499
             LYM YVHPFIFSL  IIP++PDEVLRKG+GTLCE LL V+A   N+I PNKH    +KF+
Sbjct:   470 LYMKYVHPFIFSLCNIIPLNPDEVLRKGTGTLCETLLTVEACTKNIILPNKHVDASQKFF 529

Query:   500 RNHLLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQLLNNLDRDLQYAIKVEGKMD 559
               HLL SETY+GGHVE LESGVFRSDLPT+F +DP  YE+L+  LD+ L +++ VE  ++
Sbjct:   530 DGHLLASETYVGGHVESLESGVFRSDLPTNFNMDPKVYEELILQLDKALDFSLTVENNVN 589

Query:   560 LESVSNYDEVKNAIMEKLLRLQEEPIREECPLIYHLDVAAMYPNIILTNRLQPPSIVTDE 619
             ++ + NY+EV+++I++KL  L++ P R E P IYHLDVA+MYPNI++TNRLQP S+  + 
Sbjct:   590 VDEIENYEEVRDSILKKLSDLRDRPKRSEKPRIYHLDVASMYPNIMITNRLQPDSVKDES 649

Query:   620 VCTACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYYHLKKQIESEFVDG-TNGHLSKSFLD 678
              C  CD N P KTC R++ W WRGE +  K+ +Y+ +   ++SE   G T     +SF +
Sbjct:   650 FCATCDLNVPNKTCDRRMVWAWRGEYYPAKKGEYHMIYSALQSERFPGPTPFSPFRSFQE 709

Query:   679 LPKMEQQSRLKDRLKKYCQKAYKRVLDKPVTELREAGICMRENSFYVDTVRSFRDRRYEY 738
             L   EQ + ++ R+  Y +K Y R+ D  V E RE  IC +ENSFY+DTV+SFRDRRY++
Sbjct:   710 LSPSEQAAMVQKRIADYSRKVYHRLYDNTVIE-RETIICQKENSFYIDTVKSFRDRRYDF 768

Query:   739 KGLNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHKCILNSFYGYVMRKGARWYS 798
             KGL K W  +L+  K  G   +I+EA+ MVVLYDSLQLAHK ILNSFYGYVMRKG+RWYS
Sbjct:   769 KGLQKKWVKQLAAIKEKGGLAEIEEAKKMVVLYDSLQLAHKVILNSFYGYVMRKGSRWYS 828

Query:   799 MEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLPGSFPENXXXXXXXXXXXXX 858
             +EMAG+   TGA IIQ AR ++E+ G+PLELDTDGIWC+LP SFPEN             
Sbjct:   829 IEMAGITCLTGATIIQMARQIVERAGRPLELDTDGIWCILPESFPENFEFKKKSGGKVF- 887

Query:   859 ISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEFEVDGPYKAMILPASKEEG 918
             ISYPCVMLN  V    TN QY  L DP    YET SE SI FEVDGPY+AMILPAS EEG
Sbjct:   888 ISYPCVMLNHLVHEKFTNHQYSALKDPEKLVYETTSENSIFFEVDGPYRAMILPASTEEG 947

Query:   919 ILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFLHGSTIEECYSAVAAV 978
               +KKRYAVFN DG+LAELKGFE+KRRGELKLIK FQ+++F  FL G ++EECY  VA V
Sbjct:   948 KNLKKRYAVFNFDGSLAELKGFEVKRRGELKLIKDFQSQIFKVFLKGDSLEECYQEVAYV 1007

Query:   979 ANRWLDLLDNQGKDIADSELIDYISESSTMSKSLADYGEQKSCAVTTARRLSDFLGDTMV 1038
             A+ WL++L  +G ++ D ELI+ ISE+ +MSK+L++YG QKS ++TTARRL+DFLGD M 
Sbjct:  1008 ADTWLEILFTKGSNLTDDELIELISENRSMSKALSEYGSQKSTSITTARRLADFLGDQMT 1067

Query:  1039 KDKGLRCQYIVACEPQGTPVSERAVPVAIFETDAEIMKFYLRKWCKTSS--DVGIRSIVD 1096
             KDKGL C++I++  P+G PV+ERAVPVAIF  +  + + +LR W K +   DV IR I+D
Sbjct:  1068 KDKGLACRFIISASPKGRPVAERAVPVAIFFAEESVKRHFLRLWLKDNGLYDVDIRDIID 1127

Query:  1097 WSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLYKKVREKEDKFRQRKLVDIFSS 1156
             W YY +RL S +QK+I+IPAA+Q++SNPV R   PDWL K+V     K++Q+K+  IFS 
Sbjct:  1128 WDYYLKRLGSVVQKLISIPAALQRISNPVTRFPLPDWLQKRVAVLNSKYQQKKIDSIFSL 1187

Query:  1157 LKKDDFLNKTCNAETNLMDENVEDLEDFPKKRRNSV 1192
                +     T N  T + D  +EDL     K +  V
Sbjct:  1188 APTNP---STIN-NTKVTD--IEDLGSVTHKDKRIV 1217

 Score = 599 (215.9 bits), Expect = 0., Sum P(5) = 0.
 Identities = 156/559 (27%), Positives = 267/559 (47%)

Query:  1448 ILWISDDGVPDLGGTSEEDECFADEVHQPV-LTYPGAYRKVSVELKIHHLSVNALLKSNQ 1506
             ILW +    PDLGG  ++          P+ +  PGAY    V++ + +L++ ++L S  
Sbjct:  1654 ILWWNKGPTPDLGGIEKDSILQIASPKDPLEVNNPGAYSNACVDISLSNLALCSILNSAL 1713

Query:  1507 VNEMEGGGLFGFDQDMNSGPYNNEL---CGFDETTSSAPAFRVVKQLIQRCLTDAVTSGN 1563
             +N++EG G      D      N++L    G  +      +  V+K L++    +A  SGN
Sbjct:  1714 INDIEGIGDMAALNDNYMTAINDDLEEKLGIHDNIGLTHSLPVLKALVKTWWNEAA-SGN 1772

Query:  1564 VFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEFRKLGATIIFANFSKV 1623
               AD I+QHL RW+ S  S L+ P+L   +  +M+K F  LL+E ++LGA II A+ +K+
Sbjct:  1773 NLADLIIQHLARWISSSKSYLYSPLLSSHVEVIMRKTFLQLLSEIKRLGAHIIHASANKI 1832

Query:  1624 IIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLFMDQYNYGGIPARADE 1683
             +I T K  +  A  Y + LLK+++T  LF +++L    +W  LL+MD  NYGG    A+ 
Sbjct:  1833 LIKTSKLIVQNAVTYSNYLLKSIKTLPLFHFLDLNVTEYWDYLLWMDSVNYGGKMVAANF 1892

Query:  1684 SLDDDSQVDIVSSWNIAEYLPKEIQDHFVLVVSEFMYIPWKHAQKLAASRASLQ----EG 1739
             S  ++    +VS W+I  +LP  IQ  F   + EF+   +K  QKL  S   +     + 
Sbjct:  1893 SATNEEPQTVVS-WHIKSHLPPIIQPEFQSWIVEFIEEVYK--QKLEKSNTKVGFVRVKN 1949

Query:  1740 SSCTPSITVAAAENFESHIVQYVKGEISSYFTGKLLSIVRDAIHHMKKMNNDQHNSPGVM 1799
             ++      +  +   +S ++  +K +++          VR     ++   N + +     
Sbjct:  1950 NNADEDSEIVGSGILKSKLIHPLKRKVAQ---------VRRCFQELQLDENTREDLKFPK 2000

Query:  1800 QTAANIHKVDAPLEFIKHVCAAFALDQNVQHDVLVMRKNLLKYVRVREFAPEAEFRDPCP 1859
                + ++  D  LE +K +CA F L  ++  +V  ++K+LL  ++++EF+ +A FR P  
Sbjct:  2001 LPGSFLNYTDGALELVKSICAVFELSHDLNLEVRFLKKSLLSLLQIQEFSTQAVFRYPSR 2060

Query:  1860 SFILPNVICSYCNXXXX-----------XXXXXXXXXXXQDWHCAMPQCGQPYDREVMEN 1908
                L  + C  C                             W C+   C   YDR V E 
Sbjct:  2061 RLSLDQIPCKQCGVHQDFDLCLHEHLWPTRDDMGTLVFSDGWSCS--SCNLVYDRWVFEE 2118

Query:  1909 ALLQIVRQRERLYHLQDLVCIRCNQVKAAHLAEQCACAGSFRCKEDASDFRSKMQIFLNI 1968
              L+  +  +  LY LQDL+C +C  VK   L E+C+C+G +  +   + FR  + ++ ++
Sbjct:  2119 TLVDNLYHQLTLYQLQDLICSKCKTVKQWSLKERCSCSGEWVLQLSPTKFREMLNVYQSV 2178

Query:  1969 ANRQGFQLLQECTSWILEV 1987
             A+   F +LQ     IL V
Sbjct:  2179 ADFYEFSILQNSVQSILSV 2197

 Score = 108 (43.1 bits), Expect = 0., Sum P(5) = 0.
 Identities = 30/98 (30%), Positives = 46/98 (46%)

Query:  1321 WQIIQLVPSSQSGVFLAWVVVEGIMVRIPITVPRLFYLNSKD---PIVEKFPGRRVNKT- 1376
             W I+Q+  +   G+  AWV++   +  I   V R F++  KD   P VE   G  + K+ 
Sbjct:  1297 WHILQIRETDVPGILHAWVIIRNRLTSIRFIVNRKFFVCFKDETLPNVE-IEGCLIEKSN 1355

Query:  1377 --LPHGRRSFNLIEVMIDEDQFRKESKKLAALLADPEV 1412
               LPHG  S  L  + I E  +  E   ++ + A P V
Sbjct:  1356 AILPHGSTSDKLFLLEIPEKSYLTEKVSISMIFAHPSV 1393

 Score = 61 (26.5 bits), Expect = 0., Sum P(5) = 0.
 Identities = 12/40 (30%), Positives = 21/40 (52%)

Query:  1409 DPEVEVLGWQQNAAKIGMQRCAASSQWFNERISLARYAHI 1448
             +  ++ L W+Q+ A   +Q   A   W   RI L+R++ I
Sbjct:  1587 ESNIQSLSWKQHIATKMIQHFLAIGSWLFHRIQLSRFSDI 1626

 Score = 54 (24.1 bits), Expect = 2.0e-53, Sum P(3) = 2.0e-53
 Identities = 24/115 (20%), Positives = 47/115 (40%)

Query:  1252 KGWLELKKRKWKDNLDRRKKQKLGSLRASHQANGVSESLGDMINHKEAQRRTGVGSYFRR 1311
             +G  + + RK+  N + + K    +   S +  G ++ +  +    E  R  G  SY   
Sbjct:     7 RGASKYQFRKFNGNYNGKSKSNGRTFAKSTEEVGFNDPMKIVYKKNEIDRMMGFDSYEGG 66

Query:  1312 Q--ETAMTRCHWQIIQLVP--SSQSGVFLAWVVVEGIMVRIPITVPRLFYLNSKD 1362
             Q  E  +   H  +I+     S+ S V   ++  +G   R  I     FY+ +++
Sbjct:    67 QPREAWLLNVHPTVIESTKGNSTLSAVDFYFIQDDGDTFRCTIPYSPYFYIAARE 121

 Score = 53 (23.7 bits), Expect = 0., Sum P(5) = 0.
 Identities = 13/46 (28%), Positives = 23/46 (50%)

Query:  1251 YKGWLELKKRKWK--DNLDRRKKQKLGSLRASHQANGVSESLGDMI 1294
             Y  WL+  K+KWK    +  R++  +G    S Q   V +S  +++
Sbjct:  1249 YSNWLKYAKKKWKYQKQVKLRRRHLIGF--QSRQFTNVLQSSAEVM 1292

 Score = 44 (20.5 bits), Expect = 3.0e-58, Sum P(4) = 3.0e-58
 Identities = 11/36 (30%), Positives = 18/36 (50%)

Query:  1057 PVSERAVPVAIFETDAEIMKFYLRKWCKTSSDVGIR 1092
             PVS    PV+  +  +  +K+  +KW K    V +R
Sbjct:  1235 PVSFEVKPVSFMDGYSNWLKYAKKKW-KYQKQVKLR 1269

 Score = 43 (20.2 bits), Expect = 1.5e-51, Sum P(3) = 1.5e-51
 Identities = 16/66 (24%), Positives = 32/66 (48%)

Query:  1427 QRCAASSQWFNERISLARYAHILWISDDGVPDLGGTSEEDECF----ADEVHQPVLTYPG 1482
             +R    + +F E  S+ R+   LW+ D+G+ D+      D  +       V Q +++ P 
Sbjct:  1089 ERAVPVAIFFAEE-SVKRHFLRLWLKDNGLYDVDIRDIIDWDYYLKRLGSVVQKLISIPA 1147

Query:  1483 AYRKVS 1488
             A +++S
Sbjct:  1148 ALQRIS 1153

 Score = 42 (19.8 bits), Expect = 0., Sum P(4) = 0.
 Identities = 11/33 (33%), Positives = 17/33 (51%)

Query:  1504 SNQVNEMEGGGL-FGFDQDMNSGPYNNELCGFD 1535
             +N V    G G  FGF+  M + P +N++   D
Sbjct:  1418 NNSVPGALGKGFEFGFESKMFTDPSDNDVSYLD 1450

 Score = 37 (18.1 bits), Expect = 1.6e-57, Sum P(4) = 1.6e-57
 Identities = 9/30 (30%), Positives = 16/30 (53%)

Query:  1244 NIDRIVDYKGWLELKKRKWKDNLDRRKKQK 1273
             N+D I +Y+   +   +K  D  DR K+ +
Sbjct:   589 NVDEIENYEEVRDSILKKLSDLRDRPKRSE 618


>DICTYBASE|DDB_G0283189 [details] [associations]
            symbol:DDB_G0283189 "putative DNA polymerase epsilon
            subunit A" species:44689 "Dictyostelium discoideum" [GO:0008270
            "zinc ion binding" evidence=IEA] [GO:0006260 "DNA replication"
            evidence=IEA] [GO:0006139 "nucleobase-containing compound metabolic
            process" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0003887 "DNA-directed DNA polymerase activity"
            evidence=IEA;ISS] [GO:0003677 "DNA binding" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0000166
            "nucleotide binding" evidence=IEA] [GO:0008622 "epsilon DNA
            polymerase complex" evidence=ISS] [GO:0006298 "mismatch repair"
            evidence=ISS] [GO:0006289 "nucleotide-excision repair"
            evidence=ISS] [GO:0006273 "lagging strand elongation" evidence=ISS]
            [GO:0006272 "leading strand elongation" evidence=ISS] [GO:0005657
            "replication fork" evidence=ISS] [GO:0051539 "4 iron, 4 sulfur
            cluster binding" evidence=IEA] [GO:0051536 "iron-sulfur cluster
            binding" evidence=IEA] [GO:0046872 "metal ion binding"
            evidence=IEA] [GO:0016779 "nucleotidyltransferase activity"
            evidence=IEA] [GO:0016740 "transferase activity" evidence=IEA]
            InterPro:IPR006133 InterPro:IPR006134 InterPro:IPR006172
            InterPro:IPR012337 InterPro:IPR013697 Pfam:PF00136 Pfam:PF03104
            Pfam:PF08490 SMART:SM00486 dictyBase:DDB_G0283189
            GenomeReviews:CM000153_GR GO:GO:0000166 GO:GO:0046872 GO:GO:0003677
            GO:GO:0008270 GO:GO:0051539 GO:GO:0006298 SUPFAM:SSF53098
            GO:GO:0006289 EMBL:AAFI02000051 GO:GO:0008622 GO:GO:0003887
            GO:GO:0006273 GO:GO:0006272 eggNOG:COG0417 RefSeq:XP_639211.1
            HSSP:Q56366 STRING:Q54RD4 PRIDE:Q54RD4 EnsemblProtists:DDB0216320
            GeneID:8623984 KEGG:ddi:DDB_G0283189 KO:K02324 OMA:QEESQDL
            ProtClustDB:CLSZ2498206 Uniprot:Q54RD4
        Length = 2380

 Score = 3185 (1126.2 bits), Expect = 0., Sum P(7) = 0.
 Identities = 619/1238 (50%), Positives = 848/1238 (68%)

Query:   190 IVDLREYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLLEKRVDLLQRAEVHVCAFDIETT 249
             I+D+REYDVPY++R AID ++R G WY V  +     + +    + R +  V A+DIETT
Sbjct:   218 ILDIREYDVPYYVRAAIDLNIRVGLWYTVIKNGRLTTVNELTTRVDRPDPKVLAYDIETT 277

Query:   250 KLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNVNN 309
             KLPLKFPD+  D IMMISYMLD QGYLI+NRE V EDI+D EYTPKPE+ G F V N  +
Sbjct:   278 KLPLKFPDSSIDSIMMISYMLDKQGYLIVNREIVSEDIKDFEYTPKPEYYGPFTVFNEPD 337

Query:   310 EIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDKNQGECR 369
             E  +L  +F+ ++  KP I+V+YNGD FDWPF+E+RA +HG  M  ++GF+ D   GE R
Sbjct:   338 EKSVLERFFSEIKREKPHIFVSYNGDMFDWPFVESRAEYHGLSMFHQIGFRNDN--GEYR 395

Query:   370 AKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQMMASY 429
             +K   H+D F WVKRDSYLP GS GLKAVT+ KL YDPLE++PE M++ A+E P+ +A+Y
Sbjct:   396 SKINPHMDAFCWVKRDSYLPHGSHGLKAVTREKLRYDPLELDPELMLKSAQEDPETLANY 455

Query:   430 SVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVICPN 489
             SVSDAVATYYLYM YVHPFIFSL TIIPM+PD+VLRKGSGTLCE LLM QA+KA+VI PN
Sbjct:   456 SVSDAVATYYLYMNYVHPFIFSLCTIIPMNPDDVLRKGSGTLCEALLMTQAFKADVIFPN 515

Query:   490 KHQSDPEKFYRNHLLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQLLNNLDRDLQ 549
             KH+ D    Y+ HLLESETY+GGHVECLESGVFRSD+PT+F LDP++ E+ + N+D+ L+
Sbjct:   516 KHKDDINSMYKGHLLESETYVGGHVECLESGVFRSDIPTNFSLDPASIEKHMGNIDQVLK 575

Query:   550 YAIKVEGKMDLESVSNYDEVKNAIMEKLLRLQEEPIREECPLIYHLDVAAMYPNIILTNR 609
             +A+K EG + L++VSNY EVK  +++K   L+E P ++  PLIYHLDV+AMYPNIILTN+
Sbjct:   576 FALK-EGGIPLDTVSNYQEVKEDVLKKFTLLKENPKQQSHPLIYHLDVSAMYPNIILTNK 634

Query:   610 LQPPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYYHLKKQIESE-FVDGT 668
             LQP ++V DEVC  C +N+P   C R L+W WRG+     +S+Y  + +Q+ESE F DG 
Sbjct:   635 LQPTAVVNDEVCATCVYNKPESQCQRTLDWQWRGDYSPSNQSEYRLILQQLESEKFGDGD 694

Query:   669 NGHLSKSFLDLPKMEQQSRLKDRLKKYCQKAYKRVLDKPVTELREAGICMRENSFYVDTV 728
                  KSFL L + ++   L+ RLK+Y +K Y++   +   E+R   ICMRENSFYVDTV
Sbjct:   695 E---RKSFLSLSEEKRNELLRKRLKEYSRKVYRKT-HQITQEIRSDTICMRENSFYVDTV 750

Query:   729 RSFRDRRYEYKGLNKVWKGKLSEA-KASG--NSIKIQEAQDMVVLYDSLQLAHKCILNSF 785
             R FRDRRY +K  ++ WK K  +A + SG  NS+ +  AQ MVVLY+SLQLAHKCILNSF
Sbjct:   751 RLFRDRRYVFKNHHRDWKIKYDQAMQESGGTNSVAVVAAQGMVVLYESLQLAHKCILNSF 810

Query:   786 YGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLPGSFPEN 845
             YGYVMRKGARWYSM+MAG+VT+TG+ II+ AR ++E++G+PLE+DTDGIWC+LP  FPEN
Sbjct:   811 YGYVMRKGARWYSMQMAGIVTHTGSNIIKEAREVVEQMGRPLEIDTDGIWCILPSHFPEN 870

Query:   846 XXXXXXXXXXXXXISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEFEVDGP 905
                           SY C MLN  VA++ TN QYQ   +  + TY    ECSI FE DGP
Sbjct:   871 YTLKSASTGKKVTFSYICEMLNEKVAKSFTNHQYQDY-NAETNTYTIRDECSILFECDGP 929

Query:   906 YKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFLHG 965
             Y+ M++P SKE+ + +KKRYAVFN +G + ELKGFEIKRRGELKLIK+FQ+E+F +FL G
Sbjct:   930 YRCMLIPTSKEKDVKLKKRYAVFNREGRICELKGFEIKRRGELKLIKLFQSEVFKEFLGG 989

Query:   966 STIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLADYGEQKSCAVTT 1025
              ++E CY +V AVANRWLD+LD+  ++  + +LI+ I+ESS MS+ L +YG QKS A++T
Sbjct:   990 DSLEGCYQSVGAVANRWLDILDSHAENYEEKDLIELITESSNMSRKLEEYGTQKSSAIST 1049

Query:  1026 ARRLSDFLGDTMVKDKGLRCQYIVACEPQGTPVSERAVPVAIFETDAEIMKFYLRKWCKT 1085
             A++L++FLGD M+KDKGL CQYI++ +P G+P++ERA+PVAIF+ D E    YLR+W K+
Sbjct:  1050 AKKLAEFLGDDMIKDKGLSCQYIISNKPAGSPITERALPVAIFDADFETRCHYLRRWTKS 1109

Query:  1086 -SSDVGIRSIVDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLYKKVREKEDK 1144
              S D+ IR ++DW YY+QRLS  IQKIITIPAA+Q V+NPVPRV+HPDW+ K++R  ED 
Sbjct:  1110 PSGDLDIRELIDWDYYRQRLSGVIQKIITIPAALQNVTNPVPRVIHPDWILKEIRRNEDG 1169

Query:  1145 FRQRKLVDIFSSLKKDDFLNKTCNAETNLMD------ENVEDLEDFPKKRRNSVNGPRPI 1198
              +Q  +   F   + +D  N   N   N  D      +  +D+E+    R   +    P 
Sbjct:  1170 RQQTSITSFFEKTEDNDQDNDNDNDNDNDNDNDNSKPQQTDDIENMFSSRFKDLPAFNPK 1229

Query:  1199 VRCFEVNNEQKTVKTTDQVDSLRQQLEPSEVSDQQPSSQNAIDTENIDRIVDYKGWLELK 1258
             V  F+ + +  +  ++  +   +  +E    +++Q        T +ID+  D++GWL + 
Sbjct:  1230 VTKFKRSKQSSSDVSSLLIKKSKSSIET--FTNEQEKQIMETKTPSIDK--DFQGWLSIS 1285

Query:  1259 KRKWK-DNLDRRKKQKLGSLRASHQANGVSESLGDMINHKEAQRRTGVGSYFRRQETAMT 1317
             K+KWK   L ++++Q+LG          + +S    I  K   R +   S+F+ Q   + 
Sbjct:  1286 KKKWKIQRLLKKRRQRLGG--------SLFDSDSFRIGSKLTNRESSSSSFFKSQSDIIK 1337

Query:  1318 RCHWQIIQLVP--SSQSGVFLAWVVVEGIMVRIPITVPRLFYLNSKDPIVEKFPGRRVNK 1375
             + +W II + P    + G++  W ++E  ++ I + + R+FYLNS D    +   +  N 
Sbjct:  1338 KGYWNIISIEPIYGGEPGIYQMWSLIEDQLIPIKVDIGRVFYLNSIDTDPYEDAQKNTNV 1397

Query:  1376 TLPHGRRSFNLIEVMIDEDQFRKESKKLAALLADPEVE 1413
               P G++ FN+  V + E QF ++SK+L  L  +P +E
Sbjct:  1398 IPPRGKQRFNVFSVTMSESQFLEQSKELNTLFTNPMIE 1435

 Score = 307 (113.1 bits), Expect = 0., Sum P(7) = 0.
 Identities = 54/142 (38%), Positives = 96/142 (67%)

Query:  1544 FRVVKQLIQRCLTDAVTSGNV--------FADAILQHLYRWLCSPHSKLHDPVLHRILHK 1595
             F +++ L+ +   D V+  N         +++ +L H YRW+ S +SKL+DP+L+R LH+
Sbjct:  1814 FNILRNLVSKWKLDLVSGSNSKRNEISSRYSNYLLLHFYRWISSTNSKLYDPILYRTLHQ 1873

Query:  1596 VMQKVFAMLLAEFRKLGATIIFANFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWI 1655
             +M+KVF  L+ EF+KLG+ I++ANF+K+II + K  +  A++YC+ +L  ++ +ELF WI
Sbjct:  1874 LMKKVFIQLIFEFKKLGSKIVYANFNKIIICSQKDSIEDARSYCNYILAVIKKKELFSWI 1933

Query:  1656 ELEPVHFWHSLLFMDQYNYGGI 1677
               +  +++H+LL+++  NY GI
Sbjct:  1934 NFKQTNYYHNLLWLNNSNYSGI 1955

 Score = 296 (109.3 bits), Expect = 0., Sum P(7) = 0.
 Identities = 61/150 (40%), Positives = 92/150 (61%)

Query:    24 EEELEAKLGYDLFSEGDKRLGWLLTFASSSLEDE-DTRKVYSCIDLYFVSQDGSTFKSKY 82
             ++E +    Y  F   +K  GWLL     S +D  D  K  + ++L+F+  D ++F+   
Sbjct:    12 KDEKDENDKYVGFKNYEKE-GWLLNMQPGSSKDGLDIEK--ASLELFFIQDDATSFRVWI 68

Query:    83 KFRPYFYAATKEKMEMDVEAYLRRRYESQIADIEILEKEDLDLKNHLSGLHKSYLKISFD 142
              + PYFY   KE  + +VE+YL+  YE  IA I+I++KEDLDL+NHLSGL + YLKI F 
Sbjct:    69 PYNPYFYIYVKEGHQSEVESYLKSTYEKDIAGIDIMDKEDLDLENHLSGLKRKYLKIRFH 128

Query:   143 TVQQLMDVKKDLLHVVERNQAKFDAAEAYE 172
              V  L+ V+ DL  +++RN+ K + +EAYE
Sbjct:   129 NVSTLLSVRNDLFPIIKRNKQKSNTSEAYE 158

 Score = 171 (65.3 bits), Expect = 0., Sum P(7) = 0.
 Identities = 31/62 (50%), Positives = 45/62 (72%)

Query:  1811 PLEFIKHVCAAFALDQNVQHDVLVMRKNLLKYVRVREFAPEAEFRDPCPSFILPNVICSY 1870
             PLEFIK VC   ++D+++   V  +R  L+  ++VREF+ EA+F+DPC SF LP+VICS 
Sbjct:  2168 PLEFIKFVCHVLSIDKSISSRVSRLRMKLMTSMKVREFSDEAKFKDPCVSFTLPDVICSS 2227

Query:  1871 CN 1872
             C+
Sbjct:  2228 CH 2229

 Score = 151 (58.2 bits), Expect = 0., Sum P(7) = 0.
 Identities = 30/85 (35%), Positives = 49/85 (57%)

Query:  1896 QCGQPYDREVMENALLQIVRQRERLYHLQDLVCIRCNQVKAAHLAEQCA-CAGSFRCKED 1954
             QC   Y +  +E+ L++I+++R   Y LQDL C +CN VK+ +L + C  C+G + C + 
Sbjct:  2287 QCKGHYSKNTIESQLVEIIQRRSLSYQLQDLRCSKCNDVKSDNLGDICPQCSGQWECTQS 2346

Query:  1955 ASDFRSKMQIFLNIANRQGFQLLQE 1979
              + F   + IF +IA    F+ L E
Sbjct:  2347 NNLFSKDLIIFKSIAEYHNFEWLGE 2371

 Score = 148 (57.2 bits), Expect = 0., Sum P(7) = 0.
 Identities = 36/109 (33%), Positives = 57/109 (52%)

Query:  1441 SLARYAHILWISDDGVPDLGGTSEEDECFADEVHQPVLTYPGAYRKVSVELKIHHLSVNA 1500
             SL    H+LW+SD   PDLGG+ E+D  F +E++   +     Y +V  EL I +L+ N 
Sbjct:  1676 SLVEQKHLLWMSDSNFPDLGGSEEDDAKFYEELNNVEINNSDCYNQVCFELDIENLATNT 1735

Query:  1501 LLKSNQVNEMEG--GGLFG-------FDQDMNSGPYNNELCGFDETTSS 1540
             +L+S  + E+EG  G   G       FD   N+   +N   G ++ T++
Sbjct:  1736 ILESIHLAEIEGILGNELGDESNVAMFDDIKNTSNNSNTKNGANQNTTN 1784

 Score = 95 (38.5 bits), Expect = 0., Sum P(7) = 0.
 Identities = 13/28 (46%), Positives = 25/28 (89%)

Query:  1693 IVSSWNIAEYLPKEIQDHFVLVVSEFMY 1720
             I+++WNIAE+LP +IQ  F++++S+++Y
Sbjct:  2007 IITNWNIAEFLPPQIQTSFIIIISDYIY 2034

 Score = 49 (22.3 bits), Expect = 6.3e-58, Sum P(6) = 6.3e-58
 Identities = 14/38 (36%), Positives = 21/38 (55%)

Query:   103 YLRRRYESQIADIEILEKEDLDL-KNHLSGLHKSYLKI 139
             YLRR  +S   D++I E  D D  +  LSG+ +  + I
Sbjct:  1102 YLRRWTKSPSGDLDIRELIDWDYYRQRLSGVIQKIITI 1139

 Score = 44 (20.5 bits), Expect = 5.2e-83, Sum P(7) = 5.2e-83
 Identities = 16/70 (22%), Positives = 33/70 (47%)

Query:  1155 SSLKKDDFLNKTCNAETNLMDENVEDLEDFPKKR-RNSVNGPRPIVRCFEVNNEQKTVK- 1212
             S   +D+ LNK  N+  N  + N  + +++     +N+ N  + + +    NN  K  K 
Sbjct:   154 SEAYEDESLNKILNSYYNKGNNNNNNHQNYNNNNNQNNNNFNKELNKDDNNNNNSKLNKQ 213

Query:  1213 TTDQVDSLRQ 1222
              T+ +  +R+
Sbjct:   214 ATEYILDIRE 223

 Score = 43 (20.2 bits), Expect = 2.6e-57, Sum P(6) = 2.6e-57
 Identities = 14/39 (35%), Positives = 20/39 (51%)

Query:    15 KKQKLIRSAEEELEAKLGYDLFSEGDKRLGWLLTFASSS 53
             KK K+ R  ++  + +LG  LF     R+G  LT   SS
Sbjct:  1287 KKWKIQRLLKKRRQ-RLGGSLFDSDSFRIGSKLTNRESS 1324

 Score = 41 (19.5 bits), Expect = 1.1e-82, Sum P(7) = 1.1e-82
 Identities = 14/67 (20%), Positives = 30/67 (44%)

Query:   531 KLDPSAYEQLLNNLDRDLQYAIKVEGKMDLESVSNYDEVKNAIMEKLLRLQEEPIREECP 590
             KL+  A E +L+  + D+ Y ++    +++     Y  +KN  +  +  L     R + P
Sbjct:   209 KLNKQATEYILDIREYDVPYYVRAAIDLNIRVGLWYTVIKNGRLTTVNELTTRVDRPD-P 267

Query:   591 LIYHLDV 597
              +   D+
Sbjct:   268 KVLAYDI 274

 Score = 40 (19.1 bits), Expect = 5.3e-57, Sum P(6) = 5.3e-57
 Identities = 8/17 (47%), Positives = 11/17 (64%)

Query:   139 ISFDTVQQLMDVKKDLL 155
             I  DTV    +VK+D+L
Sbjct:   583 IPLDTVSNYQEVKEDVL 599

 Score = 39 (18.8 bits), Expect = 4.6e-40, Sum P(5) = 4.6e-40
 Identities = 11/41 (26%), Positives = 21/41 (51%)

Query:  1205 NNEQKTVKTTDQVDSLRQQLEPSEVSDQQPSSQNAIDTENI 1245
             NN+     TT   D++    EP++   ++ S+ N  + E+I
Sbjct:  2068 NNDSTAATTTTTKDTIN---EPTKPDLRKSSTWNEEEDEDI 2105

 Score = 37 (18.1 bits), Expect = 1.8e-27, Sum P(4) = 1.8e-27
 Identities = 8/44 (18%), Positives = 21/44 (47%)

Query:   997 ELIDYISESSTMSKSLADYGEQKSCAVTTARRLSDFLGDTMVKD 1040
             E I ++    ++ KS++    +    + T+ ++ +F  +   KD
Sbjct:  2170 EFIKFVCHVLSIDKSISSRVSRLRMKLMTSMKVREFSDEAKFKD 2213


>UNIPROTKB|F1P1U4 [details] [associations]
            symbol:POLE "DNA polymerase" species:9031 "Gallus gallus"
            [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003677 "DNA
            binding" evidence=IEA] [GO:0006260 "DNA replication" evidence=IEA]
            [GO:0003887 "DNA-directed DNA polymerase activity" evidence=IEA]
            InterPro:IPR006133 InterPro:IPR006134 InterPro:IPR006172
            InterPro:IPR012337 Pfam:PF00136 Pfam:PF03104 SMART:SM00486
            GO:GO:0000166 GO:GO:0003677 GO:GO:0006260 SUPFAM:SSF53098
            GO:GO:0003887 GeneTree:ENSGT00390000010194 EMBL:AADN02043168
            IPI:IPI00594410 Ensembl:ENSGALT00000038196 ArrayExpress:F1P1U4
            Uniprot:F1P1U4
        Length = 1119

 Score = 3136 (1109.0 bits), Expect = 0., P = 0.
 Identities = 605/1078 (56%), Positives = 791/1078 (73%)

Query:    17 QKLIRSAE-EELEAKLGYDLFSEGDKRLGWLLTFASSSLEDEDTRKVYSCIDLYFVSQDG 75
             ++L RS   ++L+A  G++  +E  +R GWL+    + + DED R V S +D YF+ +DG
Sbjct:    27 KRLERSQRTDQLDALFGFERPAEPCERTGWLINMHPTEVLDEDRRAV-SAVDYYFIQEDG 85

Query:    76 STFKSKYKFRPYFYAATKEKMEMDVEAYLRRRYESQIADIEILEKEDLDLKNHLSGLHKS 135
             S FK    +RPYFY AT++  E +V ++L ++++ +IA +E + KEDLDL NHL GL + 
Sbjct:    86 SRFKVALPYRPYFYVATQQGCEREVSSFLAKKFQGKIAKLETVPKEDLDLPNHLVGLKRH 145

Query:   136 YLKISFDTVQQLMDVKKDLLHVVERNQAKFDAAEAYESIL---------TGKRE---QRP 183
             YLK+SF TV +L+ V+K++   V +N+ +  A + Y S+L         T   E   ++ 
Sbjct:   146 YLKLSFSTVDELVKVRKEISPAVRKNRERDQANDVYTSMLSSALAGGSLTTSEEGASKKV 205

Query:   184 QDFLDCIVDLREYDVPYHIRFAIDNDVRCGQWYDVSI--SSTGPLLEKRVDLLQRAEVHV 241
              + +D IVD+REYDVPYH+R +ID  +    WY+V    S+  P + +R DL++R +  V
Sbjct:   206 TNQMDNIVDMREYDVPYHMRLSIDLKIHVAHWYNVRYRGSTFPPEITRRDDLVERPDPVV 265

Query:   242 CAFDIETTKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGY 301
              AFDIETTKLPLKFPD + D IMMISYM+DGQGYLI NRE V EDIED E+TPKPE+EG 
Sbjct:   266 LAFDIETTKLPLKFPDPETDQIMMISYMIDGQGYLITNREIVSEDIEDFEFTPKPEYEGP 325

Query:   302 FKVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQC 361
             F V N  +E  L++ WF H+QE KP I VTYNGD+FDWPF+E RAA HG  M +E+GFQ 
Sbjct:   326 FCVFNEPDEAHLIQRWFEHVQETKPTIIVTYNGDFFDWPFVEARAAAHGINMYQEIGFQK 385

Query:   362 DKNQGECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKE 421
             D +QGE +A    H+DC  WVKRDSYLP GS  LKA  KAKLGYDP+E++PE+M R A E
Sbjct:   386 D-SQGEYKASQCIHMDCLRWVKRDSYLPVGSHNLKAAAKAKLGYDPVELDPEEMCRMATE 444

Query:   422 KPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAY 481
             +PQ +A+YSVSDAVATYY+YM YVHPFIF+L TIIPM PDEVLRKGSGTLCE LLMVQAY
Sbjct:   445 EPQTLATYSVSDAVATYYMYMKYVHPFIFALCTIIPMEPDEVLRKGSGTLCEALLMVQAY 504

Query:   482 KANVICPNKHQSDPEKFYRN-HLLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQL 540
              AN+I PNK + +  K   + H+L+SETY+GGHVE LESGVFRSD+P  FK++P+A++ L
Sbjct:   505 HANIIFPNKQEQEFNKLTEDGHVLDSETYVGGHVEALESGVFRSDIPCRFKMNPAAFDYL 564

Query:   541 LNNLDRDLQYAIKVEGKMDLESVSNYDEVKNAIMEKLLRLQEEPIREECPLIYHLDVAAM 600
             + N+++ L++AI+ E ++ L+ V+N+ EV + I  KL  L++ P R ECPLIYHLDV AM
Sbjct:   565 VQNVEKTLRHAIEEEERLPLDQVTNFQEVCDEIKVKLNSLKDVPNRIECPLIYHLDVGAM 624

Query:   601 YPNIILTNRLQPPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYYHLKKQI 660
             YPNIILTNRLQP ++V +  C ACDFN+PG  C R++ W WRGE     RS+Y+ +++Q+
Sbjct:   625 YPNIILTNRLQPSAMVDEATCAACDFNKPGANCQRRMTWQWRGEFMSASRSEYHRIQQQL 684

Query:   661 ESE-FVDGTNGHLSKSFLDLPKMEQQSRLKDRLKKYCQKAYKRVLDKPVTELREAGICMR 719
             ESE F         ++F +L + EQ    K RL  YC+KAYK++    V E R   IC R
Sbjct:   685 ESEKFPPLYPDGAPRAFHELSREEQAKYEKKRLADYCRKAYKKIHVTKVEE-RVTTICQR 743

Query:   720 ENSFYVDTVRSFRDRRYEYKGLNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHK 779
             ENSFYVDTVR+FRDRRYE+KGL+KVWK KLS A  +G++ +++  ++M +LYDSLQLAHK
Sbjct:   744 ENSFYVDTVRAFRDRRYEFKGLHKVWKKKLSAAMETGDASEVKRCKNMEILYDSLQLAHK 803

Query:   780 CILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLP 839
             CILNSFYGYVMRKGARWYSMEMAG+V +TGA II  AR LIE+IG+PLELDTDGIWCVLP
Sbjct:   804 CILNSFYGYVMRKGARWYSMEMAGIVCFTGANIITQARELIEQIGRPLELDTDGIWCVLP 863

Query:   840 GSFPENXXXXXXXXXX-XXXISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSI 898
              SFPEN              ISYP  MLN+ V    TNDQYQ L DP S TY T SE SI
Sbjct:   864 NSFPENFVIKSTNAKKPKVTISYPGAMLNILVKEGFTNDQYQELQDPASLTYVTRSENSI 923

Query:   899 EFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAEL 958
              FEVDGPY AMILPASKEEG  +KKRYAVFN+DG+LAELKGFE+KRRGEL+L+K+FQ+ +
Sbjct:   924 FFEVDGPYLAMILPASKEEGKKLKKRYAVFNEDGSLAELKGFEVKRRGELQLVKIFQSSV 983

Query:   959 FDKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLADYGEQ 1018
             F+ FL G+T+EE Y++VA VA+ WLD+L ++  ++ DSEL + ISE+ +MS+ L DYGEQ
Sbjct:   984 FEAFLKGTTLEEVYASVAKVADYWLDVLYSKAANMPDSELFELISENRSMSRKLEDYGEQ 1043

Query:  1019 KSCAVTTARRLSDFLGDTMVKDKGLRCQYIVACEPQGTPVSERAVPVAIFETDAEIMK 1076
             KS +++TA+RL++FLGD MVKD GL C++I++ +P+G+PV+ERA+P+AIF+ +  + K
Sbjct:  1044 KSTSISTAKRLAEFLGDQMVKDAGLSCRFIISKKPEGSPVTERAIPLAIFQAEPSVRK 1101


>UNIPROTKB|F5H7H6 [details] [associations]
            symbol:POLE "DNA polymerase" species:9606 "Homo sapiens"
            [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003677 "DNA
            binding" evidence=IEA] [GO:0006260 "DNA replication" evidence=IEA]
            [GO:0003887 "DNA-directed DNA polymerase activity" evidence=IEA]
            InterPro:IPR006133 InterPro:IPR006134 InterPro:IPR006172
            InterPro:IPR012337 Pfam:PF00136 Pfam:PF03104 SMART:SM00486
            GO:GO:0000166 GO:GO:0003677 GO:GO:0006260 GO:GO:0001701
            SUPFAM:SSF53098 EMBL:AC135586 EMBL:AC136467 EMBL:AC127070
            GO:GO:0003887 HGNC:HGNC:9177 ChiTaRS:POLE EMBL:AC131212
            IPI:IPI01012998 ProteinModelPortal:F5H7H6 Ensembl:ENST00000539006
            ArrayExpress:F5H7H6 Bgee:F5H7H6 Uniprot:F5H7H6
        Length = 1164

 Score = 3133 (1107.9 bits), Expect = 0., Sum P(2) = 0.
 Identities = 626/1121 (55%), Positives = 797/1121 (71%)

Query:   193 LREYDVPYHIRFAIDNDVRCGQWYDVSISSTG-PL-LEKRVDLLQRAEVHVCAFDIETTK 250
             +REYDVPYHIR +ID  +    WY+V       P+ + +R DL++R +  V AFDIETTK
Sbjct:     1 MREYDVPYHIRLSIDLKIHVAHWYNVRYRGNAFPVEITRRDDLVERPDPVVLAFDIETTK 60

Query:   251 LPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNVNNE 310
             LPLKFPDA+ D IMMISYM+DGQGYLI NRE V EDIED E+TPKPE+EG F V N  +E
Sbjct:    61 LPLKFPDAETDQIMMISYMIDGQGYLITNREIVSEDIEDFEFTPKPEYEGPFCVFNEPDE 120

Query:   311 IELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDKNQGECRA 370
               L++ WF H+QE KP I VTYNGD+FDWPF+E RAA HG  M +E+GFQ D +QGE +A
Sbjct:   121 AHLIQRWFEHVQETKPTIMVTYNGDFFDWPFVEARAAVHGLSMQQEIGFQKD-SQGEYKA 179

Query:   371 KFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQMMASYS 430
                 H+DC  WVKRDSYLP GS  LKA  KAKLGYDP+E++PEDM R A E+PQ +A+YS
Sbjct:   180 PQCIHMDCLRWVKRDSYLPVGSHNLKAAAKAKLGYDPVELDPEDMCRMATEQPQTLATYS 239

Query:   431 VSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVICPNK 490
             VSDAVATYYLYM YVHPFIF+L TIIPM PDEVLRKGSGTLCE LLMVQA+ AN+I PNK
Sbjct:   240 VSDAVATYYLYMKYVHPFIFALCTIIPMEPDEVLRKGSGTLCEALLMVQAFHANIIFPNK 299

Query:   491 HQSDPEKFYRN-HLLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQLLNNLDRDLQ 549
              + +  K   + H+L+SETY+GGHVE LESGVFRSD+P  F+++P+A++ LL  +++ L+
Sbjct:   300 QEQEFNKLTDDGHVLDSETYVGGHVEALESGVFRSDIPCRFRMNPAAFDFLLQRVEKTLR 359

Query:   550 YAIKVEGKMDLESVSNYDEVKNAIMEKLLRLQEEPIREECPLIYHLDVAAMYPNIILTNR 609
             +A++ E K+ +E V+N++EV + I  KL  L++ P R ECPLIYHLDV AMYPNIILTNR
Sbjct:   360 HALEEEEKVPVEQVTNFEEVCDEIKSKLASLKDVPSRIECPLIYHLDVGAMYPNIILTNR 419

Query:   610 LQPPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYYHLKKQIESE-----F 664
             LQP ++V +  C ACDFN+PG  C RK+ W WRGE     RS+Y+ ++ Q+ESE     F
Sbjct:   420 LQPSAMVDEATCAACDFNKPGANCQRKMAWQWRGEFMPASRSEYHRIQHQLESEKFPPLF 479

Query:   665 VDGTNGHLSKSFLDLPKMEQQSRLKDRLKKYCQKAYKRVLDKPVTELREAGICMRENSFY 724
              +G     +++F +L + EQ    K RL  YC+KAYK++    V E R   IC RENSFY
Sbjct:   480 PEGP----ARAFHELSREEQAKYEKRRLADYCRKAYKKIHITKVEE-RLTTICQRENSFY 534

Query:   725 VDTVRSFRDRRYEYKGLNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHKCILNS 784
             VDTVR+FRDRRYE+KGL+KVWK KLS A   G++ +++  ++M VLYDSLQLAHKCILNS
Sbjct:   535 VDTVRAFRDRRYEFKGLHKVWKKKLSAAVEVGDAAEVKRCKNMEVLYDSLQLAHKCILNS 594

Query:   785 FYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLPGSFPE 844
             FYGYVMRKGARWYSMEMAG+V +TGA II  AR LIE+IG+PLELDTDGIWCVLP SFPE
Sbjct:   595 FYGYVMRKGARWYSMEMAGIVCFTGANIITQARELIEQIGRPLELDTDGIWCVLPNSFPE 654

Query:   845 NXXXXXXXXXX-XXXISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEFEVD 903
             N              ISYP  MLN+ V    TNDQYQ L +P S TY T SE SI FEVD
Sbjct:   655 NFVFKTTNVKKPKVTISYPGAMLNIMVKEGFTNDQYQELAEPSSLTYVTRSENSIFFEVD 714

Query:   904 GPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFL 963
             GPY AMILPASKEEG  +KKRYAVFN+DG+LAELKGFE+KRRGEL+LIK+FQ+ +F+ FL
Sbjct:   715 GPYLAMILPASKEEGKKLKKRYAVFNEDGSLAELKGFEVKRRGELQLIKIFQSSVFEAFL 774

Query:   964 HGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLADYGEQKSCAV 1023
              GST+EE Y +VA VA+ WLD+L ++  ++ DSEL + ISE+ +MS+ L DYGEQKS ++
Sbjct:   775 KGSTLEEVYGSVAKVADYWLDVLYSKAANMPDSELFELISENRSMSRKLEDYGEQKSTSI 834

Query:  1024 TTARRLSDFLGDTMVKDKGLRCQYIVACEPQGTPVSERAVPVAIFETDAEIMKFYLRKWC 1083
             +TA+RL++FLGD MVKD GL C+YI++ +P+G+PV+ERA+P+AIF+ +  + K +LRKW 
Sbjct:   835 STAKRLAEFLGDQMVKDAGLSCRYIISRKPEGSPVTERAIPLAIFQAEPTVRKHFLRKWL 894

Query:  1084 KTSS--DVGIRSIVDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLYKKVREK 1141
             K+SS  D  IR+I+DW YY +RL SAIQKIITIPAA+Q+V NPVPRV HPDWL+KK+ EK
Sbjct:   895 KSSSLQDFDIRAILDWDYYIERLGSAIQKIITIPAALQQVKNPVPRVKHPDWLHKKLLEK 954

Query:  1142 EDKFRQRKLVDIFSSLKKDDFLNKTCNAETNLMDENVEDLEDFPKKRRNSVNGPRPIVRC 1201
              D ++Q+K+ ++F+   +         A  +    +  D+EDF       V  P P    
Sbjct:   955 NDVYKQKKISELFTLEGRRQVT--MAEASEDSPRPSAPDMEDF-----GLVKLPHPAA-- 1005

Query:  1202 FEVNNEQKTVKTTDQVDSLRQQLEPSEVSDQQPSSQNAIDTENIDRIVDYKGWLELKKRK 1261
               V  ++K V    Q +S  Q L P+    +      A+ T   + +V    WL   K+K
Sbjct:  1006 -PVTVKRKRVLWESQEES--QDLTPTVPWQEILGQPPALGTSQEEWLV----WLRFHKKK 1058

Query:  1262 W----KDNLDRRKKQKL----GSLRASHQANGVSESLGDMI 1294
             W    +  L RRK+Q+L    G LR     +G +  LG  +
Sbjct:  1059 WQLQARQRLARRKRQRLESAEGVLRPGAIRDGPATGLGSFL 1099

 Score = 155 (59.6 bits), Expect = 0., Sum P(2) = 0.
 Identities = 50/162 (30%), Positives = 79/162 (48%)

Query:  1204 VNNEQKTVKTTDQVDSLRQQLEPSEVSDQQPSSQNAIDTENIDRIVDYKGWLELKKRKW- 1262
             V  ++K V    Q +S  Q L P+    +      A+ T   + +V    WL   K+KW 
Sbjct:  1007 VTVKRKRVLWESQEES--QDLTPTVPWQEILGQPPALGTSQEEWLV----WLRFHKKKWQ 1060

Query:  1263 ---KDNLDRRKKQKLGSLRASHQANGVSESLGDMINHKEAQRRTGVGSYFRRQETAMTRC 1319
                +  L RRK+Q+L S      A GV       I    A   TG+GS+ RR   ++   
Sbjct:  1061 LQARQRLARRKRQRLES------AEGVLRP--GAIRDGPA---TGLGSFLRRTARSILDL 1109

Query:  1320 HWQIIQLVPSSQSGVFLAWVVVEGIMVRIPITVPRLFYLNSK 1361
              WQI+Q+  +SQ+G+F  W +V   +  I +++PR+FY+N +
Sbjct:  1110 PWQIVQISETSQAGLFRLWALVGSDLHCIRLSIPRVFYVNQR 1151


>FB|FBgn0264326 [details] [associations]
            symbol:DNApol-epsilon "DNA polymerase epsilon" species:7227
            "Drosophila melanogaster" [GO:0005634 "nucleus" evidence=IDA]
            [GO:0006261 "DNA-dependent DNA replication" evidence=IDA]
            [GO:0008296 "3'-5'-exodeoxyribonuclease activity" evidence=IDA]
            [GO:0003887 "DNA-directed DNA polymerase activity"
            evidence=ISS;NAS;IDA] [GO:0008622 "epsilon DNA polymerase complex"
            evidence=ISS] [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003677 "DNA
            binding" evidence=IEA] [GO:0006974 "response to DNA damage
            stimulus" evidence=IMP] [GO:0022008 "neurogenesis" evidence=IMP]
            [GO:0006281 "DNA repair" evidence=IMP] [GO:0035265 "organ growth"
            evidence=IMP] [GO:0007113 "endomitotic cell cycle" evidence=IMP]
            [GO:0000278 "mitotic cell cycle" evidence=IMP] InterPro:IPR006133
            InterPro:IPR006134 InterPro:IPR006172 InterPro:IPR012337
            InterPro:IPR013697 Pfam:PF00136 Pfam:PF03104 Pfam:PF08490
            SMART:SM00486 EMBL:AE014297 GO:GO:0022008 GO:GO:0000166
            GO:GO:0003677 GO:GO:0008270 GO:GO:0006281 GO:GO:0006261
            GO:GO:0035265 SUPFAM:SSF53098 GO:GO:0007113 GO:GO:0008622
            GO:GO:0003887 GO:GO:0008296 HSSP:Q56366 KO:K02324 OMA:QEESQDL
            GeneTree:ENSGT00390000010194 FlyBase:FBgn0264326 RefSeq:NP_524462.2
            UniGene:Dm.1294 ProteinModelPortal:Q9VCN1 IntAct:Q9VCN1
            MINT:MINT-1009597 STRING:Q9VCN1 EnsemblMetazoa:FBtr0084408
            GeneID:42758 KEGG:dme:Dmel_CG6768 CTD:42758 InParanoid:Q9VCN1
            PhylomeDB:Q9VCN1 GenomeRNAi:42758 NextBio:830428
            ArrayExpress:Q9VCN1 Bgee:Q9VCN1 Uniprot:Q9VCN1
        Length = 2236

 Score = 3001 (1061.5 bits), Expect = 0., Sum P(3) = 0.
 Identities = 604/1145 (52%), Positives = 799/1145 (69%)

Query:   172 ESILTGKREQRPQDFLDCIVDLREYDVPYHIRFAIDNDVRCGQWYDVSISSTG--PLLEK 229
             E    GKR+Q   D++DCIVD+RE+DVPYH+R +ID  + CGQWY++   S    P +  
Sbjct:   201 EDATLGKRQQ---DYMDCIVDIREHDVPYHVRVSIDLRIFCGQWYNIRCRSGVELPTITC 257

Query:   230 RVDLLQRAEVHVCAFDIETTKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIED 289
             R D+L R E  V AFDIETTKLPLKFPDA  D +MMISYM+DGQGYLI NRE +  +++D
Sbjct:   258 RPDILDRPEPVVLAFDIETTKLPLKFPDAQTDQVMMISYMIDGQGYLITNREIISSNVDD 317

Query:   290 LEYTPKPEFEGYFKVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHH 349
              EYTPKPEFEG F V N  NE++LL+ +F H+ EV+P I VTYNGD+FDWPF+ETRAA +
Sbjct:   318 FEYTPKPEFEGNFIVFNEENEMQLLQRFFDHIMEVRPHIIVTYNGDFFDWPFVETRAAVY 377

Query:   350 GFKMSEELGFQCDKNQGECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLE 409
                M +E+GF      G   ++ A H+DC  WVKRDSYLP GSQGLKAV KAKL YDP+E
Sbjct:   378 DLDMKQEIGFS-KLRDGNYLSRPAIHMDCLCWVKRDSYLPVGSQGLKAVAKAKLRYDPVE 436

Query:   410 VNPEDMVRFAKEKPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSG 469
             ++PEDM R A E+PQ++A+YSVSDAVATYYLYM YVHPFIF+L TIIPM PDE+LRKGSG
Sbjct:   437 LDPEDMCRMAVEQPQVLANYSVSDAVATYYLYMKYVHPFIFALNTIIPMEPDEILRKGSG 496

Query:   470 TLCEMLLMVQAYKANVICPNKHQSDPEKFYRN-HLLESETYIGGHVECLESGVFRSDLPT 528
             TLCE LLMV+AY A ++ PNKHQS+  K     H+L+SETY+GGHVE LESGVFR+D+P 
Sbjct:   497 TLCETLLMVEAYHAQIVYPNKHQSELNKLSNEGHVLDSETYVGGHVEALESGVFRADIPC 556

Query:   529 SFKLDPSAYEQLLNNLDRDLQYAIKVEGKMDLESVSNYDEVKNAIMEKLLRLQEEPIREE 588
              F+LDP+  +QL   +D  L++AI+VE  + LE V N DEV+  I++ L  L + P R E
Sbjct:   557 RFRLDPAMVKQLQEQVDAVLRHAIEVEEGIPLEKVLNLDEVRQEIVQGLQGLHDIPNRLE 616

Query:   589 CPLIYHLDVAAMYPNIILTNRLQPPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEIFMG 648
              P+IYHLDV AMYPNIILTNRLQP ++V+D  C ACDFN+PG  C R ++W+WRGE+   
Sbjct:   617 QPVIYHLDVGAMYPNIILTNRLQPSAMVSDLDCAACDFNKPGVRCKRSMDWLWRGEMLPA 676

Query:   649 KRSDYYHLKKQIESE-FVDGTNGHLSKSFLDLPKMEQQSRLKDRLKKYCQKAYKRV-LDK 706
              R+++  +++Q+E+E F     G   ++F +L K +Q +  K RL  YC+KAYK+  L K
Sbjct:   677 SRNEFQRIQQQLETEKFPPLFPGGPQRAFHELSKEDQAAYEKKRLTDYCRKAYKKTKLTK 736

Query:   707 PVTELREAGICMRENSFYVDTVRSFRDRRYEYKGLNKVWKGKLSEAKASGNSIKIQEAQD 766
                E R + IC +ENSFYVDTVR+FRDRRYEYKGL KV K  ++ A ASG++ +I+ A+ 
Sbjct:   737 --LETRTSTICQKENSFYVDTVRAFRDRRYEYKGLTKVAKASVNAAVASGDAAEIKAAKG 794

Query:   767 MVVLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKP 826
               VLYDSLQLAHKCILNSFYGYVMR+GARW+SM MAG+V  TG+ II  AR +IE++G+P
Sbjct:   795 REVLYDSLQLAHKCILNSFYGYVMRRGARWHSMPMAGIVCLTGSNIITKAREIIERVGRP 854

Query:   827 LELDTDGIWCVLPGSFPENXXXXXXXXXXXXX-ISYPCVMLNVDVARNNTNDQYQTL-VD 884
             LELDTDGIWC+LPGSFP+               ISYP  +LN  V  + TNDQY  L  D
Sbjct:   855 LELDTDGIWCILPGSFPQEFTIHTSHEKKKKINISYPNAVLNTMVKDHFTNDQYHELRKD 914

Query:   885 PVSKT--YETHSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEI 942
               +    Y+   E SI FEVDGPY AM+LPA+KEEG  +KKRYAVFN DGTLAELKGFE+
Sbjct:   915 KENNLPKYDIRDENSIFFEVDGPYLAMVLPAAKEEGKKLKKRYAVFNFDGTLAELKGFEV 974

Query:   943 KRRGELKLIKVFQAELFDKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYI 1002
             KRRGEL+LIK FQ+ +F+ FL GST+EECY++VA VA+ WLD+L ++G ++ DSEL + I
Sbjct:   975 KRRGELQLIKNFQSSVFEAFLAGSTLEECYASVAKVADYWLDVLYSRGSNLPDSELFELI 1034

Query:  1003 SESSTMSKSLADYGEQKSCAVTTARRLSDFLGDTMVKDKGLRCQYIVACEPQGTPVSERA 1062
             SE+ +MSK L +YG QKS +++TA+RL++FLG+ MVKD GL C+YI++ +P+G PV+ERA
Sbjct:  1035 SENKSMSKKLEEYGAQKSTSISTAKRLAEFLGEQMVKDAGLACKYIISKKPEGAPVTERA 1094

Query:  1063 VPVAIFETDAEIMKFYLRKWCK--TSSDVGIRSIVDWSYYKQRLSSAIQKIITIPAAMQK 1120
             +P+AIF+++  + + +LR+W K  T  D  IR ++DW+YY +RL   IQKIITIPAA+Q 
Sbjct:  1095 IPLAIFQSEPSVRRHHLRRWLKDNTMGDADIRDVLDWNYYIERLGGTIQKIITIPAALQG 1154

Query:  1121 VSNPVPRVVHPDWLYKKVREKEDKFRQRKLVDIFSSLKKDDFLNKTCNAETNLMDENVED 1180
             ++NPVPRV HPDWL+KK+ EK D  +QR++ ++F+S  K     K    E    ++ + D
Sbjct:  1155 LANPVPRVQHPDWLHKKMLEKNDVLKQRRINEMFTSRPKP----KPLATE----EDKLAD 1206

Query:  1181 LEDFPKKRRNSVNGPRPIVRCFEVNNEQKTVKTTDQVDSLRQQLEPSEVSDQQPSSQNAI 1240
             +ED   K         PIV       ++K ++  +  D   ++ +P   + +Q       
Sbjct:  1207 MEDLAGKDGGEGAAGCPIV------TKRKRIQLEEHDD---EEAQPQATTWRQALGAPPP 1257

Query:  1241 DTENIDRIVDYKGWLELKKRKWKDNLDRRKKQKLGSLRASH----QANGVSESLGDMINH 1296
               E    IV++  + + KK KW+ +  +R +Q     R       +A G + +LG  +  
Sbjct:  1258 IGETRKTIVEWVRF-QKKKWKWQQDQRQRNRQASKRTRGEDPPVVRATGSTATLGGFL-- 1314

Query:  1297 KEAQR 1301
             + AQR
Sbjct:  1315 RRAQR 1319

 Score = 2393 (847.4 bits), Expect = 0., Sum P(3) = 0.
 Identities = 466/876 (53%), Positives = 616/876 (70%)

Query:    25 EELEAKLGYDLFSEGDKRLGWLLTFASSSLEDEDTRKVYSCIDLYFVSQDGSTFKSKYKF 84
             +++++K G+D   +  +R G+L+   S+ + DED R++ + +DL+F+  DGS FK    +
Sbjct:    40 DKIDSKYGFDRVKDSQERTGYLINMHSNEVLDED-RRLIAALDLFFIQMDGSRFKCTVAY 98

Query:    85 RPYFYAATKEKMEMDVEAYLRRRYESQIADIEILEKEDLDLKNHLSGLHKSYLKISFDTV 144
             +PY     ++ M ++V  +L R+Y  QI+ +E + KEDLDL NHLSGL + Y+K+SF   
Sbjct:    99 QPYLLIRPEDNMHLEVARFLGRKYSGQISGLEHITKEDLDLPNHLSGLQQQYIKLSFLNQ 158

Query:   145 QQLMDVKKDLLHVVERNQAKFDAAEAYESILT--------GKRE----QRPQDFLDCIVD 192
               +  V+++L+  V+RNQ +  +   Y  +L         G  +    +R QD++DCIVD
Sbjct:   159 TAMTKVRRELMSAVKRNQERQKSNTYYMQMLATSLAQSSAGSEDATLGKRQQDYMDCIVD 218

Query:   193 LREYDVPYHIRFAIDNDVRCGQWYDVSISSTG--PLLEKRVDLLQRAEVHVCAFDIETTK 250
             +RE+DVPYH+R +ID  + CGQWY++   S    P +  R D+L R E  V AFDIETTK
Sbjct:   219 IREHDVPYHVRVSIDLRIFCGQWYNIRCRSGVELPTITCRPDILDRPEPVVLAFDIETTK 278

Query:   251 LPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNVNNE 310
             LPLKFPDA  D +MMISYM+DGQGYLI NRE +  +++D EYTPKPEFEG F V N  NE
Sbjct:   279 LPLKFPDAQTDQVMMISYMIDGQGYLITNREIISSNVDDFEYTPKPEFEGNFIVFNEENE 338

Query:   311 IELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDKNQGECRA 370
             ++LL+ +F H+ EV+P I VTYNGD+FDWPF+ETRAA +   M +E+GF      G   +
Sbjct:   339 MQLLQRFFDHIMEVRPHIIVTYNGDFFDWPFVETRAAVYDLDMKQEIGFS-KLRDGNYLS 397

Query:   371 KFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQMMASYS 430
             + A H+DC  WVKRDSYLP GSQGLKAV KAKL YDP+E++PEDM R A E+PQ++A+YS
Sbjct:   398 RPAIHMDCLCWVKRDSYLPVGSQGLKAVAKAKLRYDPVELDPEDMCRMAVEQPQVLANYS 457

Query:   431 VSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVICPNK 490
             VSDAVATYYLYM YVHPFIF+L TIIPM PDE+LRKGSGTLCE LLMV+AY A ++ PNK
Sbjct:   458 VSDAVATYYLYMKYVHPFIFALNTIIPMEPDEILRKGSGTLCETLLMVEAYHAQIVYPNK 517

Query:   491 HQSDPEKFYRN-HLLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQLLNNLDRDLQ 549
             HQS+  K     H+L+SETY+GGHVE LESGVFR+D+P  F+LDP+  +QL   +D  L+
Sbjct:   518 HQSELNKLSNEGHVLDSETYVGGHVEALESGVFRADIPCRFRLDPAMVKQLQEQVDAVLR 577

Query:   550 YAIKVEGKMDLESVSNYDEVKNAIMEKLLRLQEEPIREECPLIYHLDVAAMYPNIILTNR 609
             +AI+VE  + LE V N DEV+  I++ L  L + P R E P+IYHLDV AMYPNIILTNR
Sbjct:   578 HAIEVEEGIPLEKVLNLDEVRQEIVQGLQGLHDIPNRLEQPVIYHLDVGAMYPNIILTNR 637

Query:   610 LQPPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYYHLKKQIESE-FVDGT 668
             LQP ++V+D  C ACDFN+PG  C R ++W+WRGE+    R+++  +++Q+E+E F    
Sbjct:   638 LQPSAMVSDLDCAACDFNKPGVRCKRSMDWLWRGEMLPASRNEFQRIQQQLETEKFPPLF 697

Query:   669 NGHLSKSFLDLPKMEQQSRLKDRLKKYCQKAYKRV-LDKPVTELREAGICMRENSFYVDT 727
              G   ++F +L K +Q +  K RL  YC+KAYK+  L K   E R + IC +ENSFYVDT
Sbjct:   698 PGGPQRAFHELSKEDQAAYEKKRLTDYCRKAYKKTKLTK--LETRTSTICQKENSFYVDT 755

Query:   728 VRSFRDRRYEYKGLNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHKCILNSFYG 787
             VR+FRDRRYEYKGL KV K  ++ A ASG++ +I+ A+   VLYDSLQLAHKCILNSFYG
Sbjct:   756 VRAFRDRRYEYKGLTKVAKASVNAAVASGDAAEIKAAKGREVLYDSLQLAHKCILNSFYG 815

Query:   788 YVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLPGSFPENXX 847
             YVMR+GARW+SM MAG+V  TG+ II  AR +IE++G+PLELDTDGIWC+LPGSFP+   
Sbjct:   816 YVMRRGARWHSMPMAGIVCLTGSNIITKAREIIERVGRPLELDTDGIWCILPGSFPQEFT 875

Query:   848 XXXXXXXXXXX-ISYPCVMLNVDVARNNTNDQYQTL 882
                         ISYP  +LN  V  + TNDQY  L
Sbjct:   876 IHTSHEKKKKINISYPNAVLNTMVKDHFTNDQYHEL 911

 Score = 619 (223.0 bits), Expect = 0., Sum P(3) = 0.
 Identities = 167/556 (30%), Positives = 276/556 (49%)

Query:  1442 LARYAHILWISDDGVPDLGGTSEEDECFADEVHQPVLTYP---GAYRKVSVELKIHHLSV 1498
             L R+  +LW S    PDLGG   +D     E  + +       G Y  V VEL +  L+V
Sbjct:  1684 LQRHNFVLWWSASTRPDLGGREADDSRLLAEFEESISVVQNKAGFYPDVCVELALDSLAV 1743

Query:  1499 NALLKSNQVNEMEGGG-LFGFD-------QDMNSGPYNNELCGFDETTSSAPAFRVVKQL 1550
             +ALL+S ++ EMEG      FD       ++M        L  +DET   + AFRV++ +
Sbjct:  1744 SALLQSTRIQEMEGASSAITFDVMPQVSLEEMIGTVPAATLPSYDETALCSAAFRVMRSM 1803

Query:  1551 IQRCLTDAVTSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEFRK 1610
             +   L +   + N+F+D  + H YRW+ S ++ L+DP L R L+ +M+K+F  ++AEF++
Sbjct:  1804 VNGWLREVSINRNIFSDFQIVHFYRWVRSSNALLYDPALRRSLNNLMRKMFLRIIAEFKR 1863

Query:  1611 LGATIIFANFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLFMD 1670
             LGATII+A+F+++I+ +GK  +S A  Y D ++++L+ +E+F  I+L     W+ +L+MD
Sbjct:  1864 LGATIIYADFNRIILSSGKKTVSDALGYVDYIVQSLRNKEMFHSIQLSFEQCWNFMLWMD 1923

Query:  1671 QYNYGGIPARADESLDDDSQVDIVSSWNIAEYLPKEIQDHFVLVVSEFMY-IPWKHAQKL 1729
             Q N+ GI  +  + +D+     IVS+  I +    +  D      SE    +    A++ 
Sbjct:  1924 QANFSGIRGKLPKGIDETVS-SIVSTTMIRDSERNQDDDEDEEEDSENRDPVESNEAEQD 1982

Query:  1730 AASRASLQEGSSCTPSITVA--AAENFESHIVQYVKGEISSYFTGKLLSIVRDAIHHMKK 1787
                  SL+   +    +       E FES +  +++       T +    ++D  H    
Sbjct:  1983 QEDELSLELNWTIGEHLPDENECREKFESLLTLFMQSLAEKKTTEQA---IKDISHCAFD 2039

Query:  1788 MNNDQHNSPGVMQTAANIHKVDAPLEFIKHVCAAFALDQNVQHDVLVMRKNLLKYVRVRE 1847
                  H + G         K    LE I+ +  A ++D+ +   +  +R+N+L+ V + E
Sbjct:  2040 FILKLHKNYGK-------GKPSPGLELIRTLIKALSVDKTLAEQINELRRNMLRLVGIGE 2092

Query:  1848 FAPEAEFRDPCPSFILPNVICSYCNXXXXXXXXXXXXXXXQD----WHCAMPQCGQPYDR 1903
             F+  AE+ DPC S I+  VIC  CN               +D    W CA  QC   YD 
Sbjct:  2093 FSDLAEWEDPCDSHIINEVICKACNHCRDLDLCKDKHRAMKDGVPVWLCA--QCYVAYDN 2150

Query:  1904 EVMENALLQIVRQRERLYHLQDLVCIRCNQVKAAHLAEQCACAGSFRCKEDASDFRSKMQ 1963
             E +E  +L  ++++   Y LQDL C RC+++K  +LAE C CAG+F       D ++ + 
Sbjct:  2151 EEIEMRMLDALQRKMMSYVLQDLRCSRCSEIKRENLAEFCTCAGNFVPLISGKDIQTLLG 2210

Query:  1964 IFLNIANRQGFQLLQE 1979
              F  +A     QLLQ+
Sbjct:  2211 TFNKVAANHKMQLLQQ 2226

 Score = 221 (82.9 bits), Expect = 0., Sum P(3) = 0.
 Identities = 52/162 (32%), Positives = 80/162 (49%)

Query:  1254 WLELKKRKWKDNLDRRKKQKLGSLRASHQANGVSESLGDMINHKEAQRRTGVGSYFRRQE 1313
             W+  +K+KWK   D+R++ +  S R   +   V  + G             +G + RR +
Sbjct:  1268 WVRFQKKKWKWQQDQRQRNRQASKRTRGEDPPVVRATGSTAT---------LGGFLRRAQ 1318

Query:  1314 TAMTRCHWQIIQLVPSSQSGVFLAWVVVEGIMVRIPITVPRLFYLNSKD--PIVEKFPGR 1371
               +    WQI+QLVP    G F  W ++   + +I +TVPR+FY+N +   P  E    R
Sbjct:  1319 RTLLDQPWQIVQLVPVDDLGHFTVWALIGEELHKIKLTVPRIFYVNQRSAAPPEEGQLWR 1378

Query:  1372 RVNKTLPHGRRSFNLIEVMIDEDQFRKESKKLAALLADPEVE 1413
             +VN+ LP  R  FNL    + E  FR  S  + A LA P++E
Sbjct:  1379 KVNRVLPRSRPVFNLYRYSVPEQLFRDNSLGMLADLATPDIE 1420

 Score = 38 (18.4 bits), Expect = 5.4e-250, Sum P(2) = 5.4e-250
 Identities = 12/45 (26%), Positives = 23/45 (51%)

Query:  1475 QPVLTYPGAYRKVSVEL-KIHH--------LSVNALLKSNQVNEM 1510
             Q ++T P A + ++  + ++ H        L  N +LK  ++NEM
Sbjct:  1143 QKIITIPAALQGLANPVPRVQHPDWLHKKMLEKNDVLKQRRINEM 1187


>WB|WBGene00009368 [details] [associations]
            symbol:F33H2.5 species:6239 "Caenorhabditis elegans"
            [GO:0003887 "DNA-directed DNA polymerase activity" evidence=IEA]
            [GO:0006260 "DNA replication" evidence=IEA] [GO:0000166 "nucleotide
            binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0006139
            "nucleobase-containing compound metabolic process" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc ion binding"
            evidence=IEA] [GO:0009792 "embryo development ending in birth or
            egg hatching" evidence=IMP] [GO:0006997 "nucleus organization"
            evidence=IMP] [GO:0002009 "morphogenesis of an epithelium"
            evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0040035
            "hermaphrodite genitalia development" evidence=IMP] [GO:0000003
            "reproduction" evidence=IMP] InterPro:IPR006133 InterPro:IPR006134
            InterPro:IPR006172 InterPro:IPR012337 InterPro:IPR013697
            Pfam:PF00136 Pfam:PF03104 Pfam:PF08490 SMART:SM00486 GO:GO:0005634
            GO:GO:0009792 GO:GO:0002009 GO:GO:0000166 GO:GO:0003677
            GO:GO:0006260 GO:GO:0008270 GO:GO:0040011 GO:GO:0040035
            SUPFAM:SSF53098 GO:GO:0006997 GO:GO:0003887 eggNOG:COG0417
            KO:K02324 OMA:QEESQDL GeneTree:ENSGT00390000010194
            HOGENOM:HOG000196287 EMBL:Z81526 PIR:T21712 RefSeq:NP_493616.1
            ProteinModelPortal:O62218 STRING:O62218 PaxDb:O62218
            EnsemblMetazoa:F33H2.5 GeneID:173368 KEGG:cel:CELE_F33H2.5
            UCSC:F33H2.5 CTD:173368 WormBase:F33H2.5 InParanoid:O62218
            NextBio:879359 Uniprot:O62218
        Length = 2144

 Score = 2996 (1059.7 bits), Expect = 0., Sum P(4) = 0.
 Identities = 605/1185 (51%), Positives = 801/1185 (67%)

Query:    19 LIRSAEEELEAKLGYDLFSEGDKRLGWLLTFASSSLEDEDTRKVYSCIDLYFVSQDGSTF 78
             LIRS  +E++AKLG+  ++   ++ G+L+    S L DE T+ + S +D +F+S     F
Sbjct:    24 LIRS-NDEIDAKLGFSRYTGLQEKKGFLINIQPSELVDEQTKVIISVVDYFFISDMDERF 82

Query:    79 KSKYKFRPYFYAATKEKMEMDVEAYLRRRYESQIADIEILEKEDLDLKNHLSGLHKSYLK 138
             K  Y FRPYFY AT +  E  V +YL ++Y +Q A +E +++EDLDLK+HLSGL K+Y+K
Sbjct:    83 KISYPFRPYFYIATLDGFEFQVSSYLSKKYGAQTA-VEHMDREDLDLKDHLSGLKKTYIK 141

Query:   139 ISFDTVQQLMDVKKDLLHVVERNQAKFDAAEAYESIL----TGK----REQRPQ-DFLDC 189
             +SF +  +L+ ++K+L+ +V +N  +     AY   L    +GK    ++Q+   D L+ 
Sbjct:   142 LSFTSTVELIKIRKELMPLVRKNTDRIKKESAYADYLARNLSGKGGDSKDQQLNGDILNQ 201

Query:   190 IVDLREYDVPYHIRFAIDNDVRCGQWYDVS-ISSTGPLLEKRVDL-LQRAEVHVCAFDIE 247
             IVD+REYDVP+H+R +ID  +  G WYDV  I        KR DL L  A+  V AFDIE
Sbjct:   202 IVDIREYDVPFHMRVSIDEKIFVGLWYDVKGIGPNRVPTIKRKDLPLFHAKPKVLAFDIE 261

Query:   248 TTKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNV 307
             TTKLPLKFPD + D IMMISYM+DG+G+LIINRE V  DI   EYTPK E+ G F V N 
Sbjct:   262 TTKLPLKFPDRESDEIMMISYMVDGRGFLIINREIVSADINAFEYTPKAEYIGEFTVWNE 321

Query:   308 NNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDKNQGE 367
              +E  L+R +F H  +V+P I VTYNGD+FDWPF+E RA   GF M  E+GF  D +  E
Sbjct:   322 KDEAALIRKFFDHFLQVRPNIVVTYNGDFFDWPFVEARAKIRGFNMEREIGFSKD-SADE 380

Query:   368 CRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQMMA 427
              +++   H+D F WVKRDSYLP GSQ LKAVTKAKL YDP+EV PE M + A+E+PQ +A
Sbjct:   381 YKSRNCIHMDAFRWVKRDSYLPVGSQNLKAVTKAKLRYDPVEVEPELMCKMAREQPQQLA 440

Query:   428 SYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVIC 487
             +YSVSDAV+TYYLYM YVH FIF+L TIIP+  D+VLRKGSGTLCE LLMV+A+  N++ 
Sbjct:   441 NYSVSDAVSTYYLYMKYVHQFIFALCTIIPLGADDVLRKGSGTLCEALLMVEAFHNNIVF 500

Query:   488 PNKHQSDPE-KFYRN-HLLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQLLNNLD 545
             PNK+    E +F ++ H +ESETY+GGHVE LE+GVFR+D+P  F+L   A EQL + + 
Sbjct:   501 PNKYTGPEETRFSKDGHRVESETYVGGHVEALEAGVFRADIPAKFRLSVPALEQLKSEIQ 560

Query:   546 RDLQYAIKVEGKMDLESVSNYDEVKNAIMEKLLRLQEEPIREECPLIYHLDVAAMYPNII 605
               L+  +  E ++ L+ V ++DE    + +    +   P R E P IYHLDV AMYPNII
Sbjct:   561 ETLRKELAREFEVTLDQVVDFDEQCAEVQDAFDGMINVPTRLENPRIYHLDVGAMYPNII 620

Query:   606 LTNRLQPPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYYHLKKQIESEFV 665
             LTNRLQP ++VT+E+C  C +N+P   C R + W WRGE+    R +Y  + +Q+E+E  
Sbjct:   621 LTNRLQPCAMVTEEICMGCSYNKPDAECKRTMAWEWRGELTPATRGEYQQIMQQLEAE-- 678

Query:   666 DGTNGHLSKSFLDLPKMEQQSRLKDRLKKYCQKAY-KRVLDKPVTELREAGICMRENSFY 724
               + G   K F  L + E+++    R+K Y ++ Y K  L +   E+RE  IC REN FY
Sbjct:   679 --SFGKPPKHFHMLERSEREAIEMKRIKDYSRRVYGKTHLTR--LEMRETTICQRENHFY 734

Query:   725 VDTVRSFRDRRYEYKGLNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHKCILNS 784
             V+TV++FRDRRYEYK + K  KG+  +A+A+ +   +  ++  +VLY+SLQLAHKCILNS
Sbjct:   735 VETVKAFRDRRYEYKDMLKKAKGRFDQAQATNDLATMTTSKLEMVLYESLQLAHKCILNS 794

Query:   785 FYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLPGSFPE 844
             FYGYVMRKG+RW+SMEMAG+V +TGA II+ AR L+E+IG PLELDTDGIWC++P SFPE
Sbjct:   795 FYGYVMRKGSRWFSMEMAGIVCHTGANIIREARKLVEQIGTPLELDTDGIWCLIPASFPE 854

Query:   845 NXXXXXXXXXXXX-XISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEFEVD 903
             N              +SYP  MLN  V    TN QY TL    S  Y   SE SI FEVD
Sbjct:   855 NVTFKLKNHKRSSVTVSYPGAMLNALVYEGFTNHQYHTLEKDGS--YSKSSENSIYFEVD 912

Query:   904 GPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFL 963
             GPY+ MILPASKEEG  +KKRYAVFN DG+LAE+KGFE+KRRGEL +IK FQ  +F  FL
Sbjct:   913 GPYQCMILPASKEEGKKLKKRYAVFNLDGSLAEMKGFELKRRGELNIIKHFQGCVFKTFL 972

Query:   964 HGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLADYGEQKSCAV 1023
             +G T+EE Y AVAA A+ WLD+L + G D+ D EL D ISE+ +MS+ L DYG QKS ++
Sbjct:   973 NGKTLEETYKAVAADADHWLDILHSHGADLTDEELFDLISENRSMSRKLEDYGAQKSTSI 1032

Query:  1024 TTARRLSDFLGDTMVKDKGLRCQYIVACEPQGTPVSERAVPVAIFETDAEIMKFYLRKWC 1083
             +TA+RL++FLGD MVKD GL C +I++  P G PV+ERA+PVAIF++DA++   Y+RKW 
Sbjct:  1033 STAKRLAEFLGDDMVKDAGLACMFIISKHPIGAPVTERAIPVAIFKSDAKVRSHYIRKWT 1092

Query:  1084 KT---SSDVGIRSIVDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLYKKVRE 1140
             K    + D  IR ++DW YY +R  S IQKIITIPAA+Q +SNPVPRV HPDWL  K+R 
Sbjct:  1093 KQVDFNEDTDIRDMLDWDYYLERFGSCIQKIITIPAALQGISNPVPRVPHPDWLQNKIRN 1152

Query:  1141 KEDKFRQRKLVDIFSSLKKDDFLNKTCNAETNLMDENV--EDLED 1183
             K D  RQ ++  IF++ +K               D++V  ED  D
Sbjct:  1153 KFDAHRQPRINQIFAACQKPSTSQMDNGKRRRTPDDDVASEDAMD 1197

 Score = 314 (115.6 bits), Expect = 0., Sum P(4) = 0.
 Identities = 86/305 (28%), Positives = 153/305 (50%)

Query:  1441 SLARYAHILWISDDGVPDLGGTSEED-ECFAD----EVHQPVLTYPGAYRKVS-VELKIH 1494
             +L +  H LW +    PDLGG   +D     D     +   VL     + + + VEL++ 
Sbjct:  1620 NLQKSGHALWATRASRPDLGGKEMDDVRLSVDWNPLSIDDTVLLNRETFCETACVELQLS 1679

Query:  1495 HLSVNALLKSNQVNEMEGGG-LFGFD-------QDMNSGPYNNELCGFDETTSSAPAFRV 1546
              ++V AL++ ++V E EG   +  FD       Q +  G  N+  C +DE  +     +V
Sbjct:  1680 AVAVTALVQRSRVLEAEGADDVVTFDSMNTIAQQSVTGGAVNSIAC-YDEGAAVDATIKV 1738

Query:  1547 VKQLIQRCLTDAVTSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLA 1606
             +KQ++  C+      GN  AD ++  + RWL +  + L D  L R +  +  K+  +L A
Sbjct:  1739 LKQMLTECVRHIAHQGNARADEVVMTVSRWLNTRSALLFDAALTRSVSVLESKLVLLLCA 1798

Query:  1607 EFRKLGATIIFANFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSL 1666
             E  ++GA +I A   K++++TGK     AK + + L+++L T  +F  + + PV F+ ++
Sbjct:  1799 ECERIGAKVIHATAQKLVLNTGKSTSEEAKGFAEMLIQSLSTNVVFAALHITPVKFFDAM 1858

Query:  1667 LFMDQYNYGGI---------P-ARADESLDDDSQVDIVSSWNIAEYLPKE--IQDHFVLV 1714
             L+MD +N+ GI         P   ADE     ++ +  + W IAE +P E  IQ+ F+ +
Sbjct:  1859 LWMDAHNHTGIRISEKTESSPDVIADEEESSCTEFETTAIWKIAEEMPTEANIQEEFLQM 1918

Query:  1715 VSEFM 1719
             +  ++
Sbjct:  1919 IGAYI 1923

 Score = 103 (41.3 bits), Expect = 0., Sum P(4) = 0.
 Identities = 37/172 (21%), Positives = 66/172 (38%)

Query:  1818 VCAAFALDQNVQHDVLVMRKNLLKYVRVREFAPEAEFRDPCPSFIL--PNVICSYCNXXX 1875
             +C A + DQ  Q  V  +R N  + +       EA+   P  S  L   NV C+ C+   
Sbjct:  1981 LCRALSCDQTSQLAVEGIRDNAKRLLH--NSVVEADMT-PLRSTTLFVSNVFCNSCSQAS 2037

Query:  1876 XXXXXXXXXXXXQDWHCAMPQCGQPYDREVMENALLQIVRQRERLYHLQDLVCIRCNQVK 1935
                             CA   C    + +V++  +   + Q    Y +QD  C +C  V+
Sbjct:  2038 NVFLSSTDEILT----CAT--CQSKLNSDVIDMMICDRLNQLLTAYQIQDHQCTKCKSVR 2091

Query:  1936 AAHLAEQCACAGSFRCKEDASDFRSKMQIFLNIANRQGFQLLQECTSWILEV 1987
                L+  C C   F  +   +  + +      ++  + F L  E  +W+L++
Sbjct:  2092 HDTLSMYCECCSQFIPQITPAQLKHEASTVETVSIVRNFALSSELATWVLKM 2143

 Score = 99 (39.9 bits), Expect = 0., Sum P(4) = 0.
 Identities = 45/202 (22%), Positives = 92/202 (45%)

Query:  1213 TTDQVDSLRQQLEPSEVSDQQPSSQNAIDTENIDRIVDYKGWLELKKRKWKDNLDRRKKQ 1272
             +T Q+D+ +++  P    D   +S++A+D+++ D I+D       K++K   N  +    
Sbjct:  1173 STSQMDNGKRRRTP----DDDVASEDAMDSQD-DIIIDDDKENGAKRQK---NTKKVHTT 1224

Query:  1273 KLGSLRASHQANGVSESLGDM-----INHKEAQRRTG------VGSYFRRQETAMTRCHW 1321
             ++   + +   +G  E +G +     +  KE + +        V +  R    A     W
Sbjct:  1225 EVVLEKKTLVEHGFDEWMGFLKKKWRVQRKERKTQLSSKDSDVVEAIVRGAREAEHDKEW 1284

Query:  1322 QIIQLVPSSQSGVFLAWVVVEGIMVRIPITVPRLFYLNSKDPIVEKFPGRRVNKTLPHGR 1381
              I+ + P++ +  F  W+ V+G M ++ + + R   ++S+ P  ++   RR+   LPH +
Sbjct:  1285 HILSVEPTADASFFNVWLAVQGQMHKVIMKIGRRIIVDSRAPRGDRDTIRRI---LPHHK 1341

Query:  1382 RSFNLIEVMIDEDQFRKESKKL 1403
                 L E   DE+Q      KL
Sbjct:  1342 TPGFLYEFRTDENQLTALMDKL 1363

 Score = 44 (20.5 bits), Expect = 1.8e-26, Sum P(3) = 1.8e-26
 Identities = 23/101 (22%), Positives = 51/101 (50%)

Query:   520 GVFRSDLPTSFKLDPSAYEQLLNNLDRDLQYAIKVEG-KMDLESVSNYDEVKNAIMEKLL 578
             G++ S++PTSF+    A  QL + +  D  + I + G ++ LE++   ++     +++ +
Sbjct:  1374 GIYESEVPTSFR----AVLQLGSIVRPD--HGISLGGHQLTLENLKPMEKAPYLPLDQKI 1427

Query:   579 R-LQEEPIREECPLIYHL---DVAAMYPNIILTNRLQPPSI 615
             R +      ++   +Y L     +A Y  I+ T  +Q P++
Sbjct:  1428 RTIFLYKFSQDSRHVYSLIDSSGSAAYFYIVNTGDVQMPNM 1468

 Score = 40 (19.1 bits), Expect = 6.4e-31, Sum P(4) = 6.4e-31
 Identities = 11/42 (26%), Positives = 22/42 (52%)

Query:  1174 MDENVEDLEDFPKKRRNSVNGPRPIVRC-FEVNNEQKTVKTT 1214
             +D ++ +++ F  KRR  +N  +    C F+     KT++ T
Sbjct:   939 LDGSLAEMKGFELKRRGELNIIKHFQGCVFKTFLNGKTLEET 980

 Score = 37 (18.1 bits), Expect = 9.5e-26, Sum P(3) = 9.5e-26
 Identities = 7/11 (63%), Positives = 9/11 (81%)

Query:    57 EDTRKVYSCID 67
             +D+R VYS ID
Sbjct:  1437 QDSRHVYSLID 1447

 Score = 37 (18.1 bits), Expect = 1.4e-24, Sum P(4) = 1.4e-24
 Identities = 10/38 (26%), Positives = 20/38 (52%)

Query:  1280 SHQANGVSESLGDMINHKEAQRRTGVGSYFRRQETAMT 1317
             SH A+   E L D+I+   +  R  +  Y  ++ T+++
Sbjct:   997 SHGADLTDEELFDLISENRSMSRK-LEDYGAQKSTSIS 1033


>GENEDB_PFALCIPARUM|PFF1470c [details] [associations]
            symbol:PFF1470c "DNA polymerase epsilon,
            catalytic subunit a, putative" species:5833 "Plasmodium falciparum"
            [GO:0008622 "epsilon DNA polymerase complex" evidence=ISS]
            [GO:0003887 "DNA-directed DNA polymerase activity" evidence=ISS]
            [GO:0006261 "DNA-dependent DNA replication" evidence=ISS]
            InterPro:IPR006133 InterPro:IPR006172 InterPro:IPR012337
            Pfam:PF03104 SMART:SM00486 GO:GO:0000166 GO:GO:0003676
            GO:GO:0006261 SUPFAM:SSF53098 EMBL:AL844505 GO:GO:0008622
            GO:GO:0003887 KO:K02324 RefSeq:XP_966285.1
            ProteinModelPortal:C6KTD8 IntAct:C6KTD8 PRIDE:C6KTD8
            EnsemblProtists:PFF1470c:mRNA GeneID:3885768 KEGG:pfa:PFF1470c
            EuPathDB:PlasmoDB:PF3D7_0630300 HOGENOM:HOG000281650
            ProtClustDB:CLSZ2432328 Uniprot:C6KTD8
        Length = 2907

 Score = 992 (354.3 bits), Expect = 1.2e-221, Sum P(9) = 1.2e-221
 Identities = 210/506 (41%), Positives = 309/506 (61%)

Query:   174 ILTGKREQRPQDFLDCIVDLREYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLLEK-RVD 232
             + T K+    ++ ++ I+++ EYDV Y  R  ID ++RCG WY V         E  + +
Sbjct:   269 VTTKKQILSKEEIMNEIIEIYEYDVKYLTRICIDKNIRCGLWYKVKREEDELYTELIQFE 328

Query:   233 LLQR---AEVHVCAFDIETTKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIED 289
             +L +   A +++ A+DIE  K  LKFPD + D I++ISYM + QGYLI+NR  + ++I +
Sbjct:   329 ILNKKVLAPLNILAWDIECYKDELKFPDKEKDEIILISYMYNAQGYLIVNRNVMSKNIRE 388

Query:   290 LEYTPKPEFEGY--FKVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAA 347
               Y P  E+ G   FK+ N  NE  LL+ +  H++ +K  I+VTYNGD+FD P+L  R  
Sbjct:   389 FLYKPNEEYSGAGTFKIFNEKNEYFLLKRFLEHIRLLKIHIFVTYNGDFFDIPYLYRRCE 448

Query:   348 HHGFKMSEELGFQCDKNQGECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDP 407
              +   +S E+GF  +  Q EC   F  ++D + WV+RDSYLP GS+ LK+V K KL Y+P
Sbjct:   449 INNLSVSREIGFIMNNKQ-ECSCNFILNIDAYKWVERDSYLPNGSRTLKSVCKIKLKYNP 507

Query:   408 LEVNPEDMVRFAKEKPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKG 467
              EV+PE MV  AK  PQ +A YSVSDAVAT+YLY  ++H F+F+L++IIPM+PD VLR+G
Sbjct:   508 TEVDPELMVPIAKNNPQHLAVYSVSDAVATFYLYDKFIHNFLFALSSIIPMNPDNVLRQG 567

Query:   468 SGTLCEMLLMVQAYKANVICPNKHQ-------SDPEKFYRNHLLESETYIGGHVECLESG 520
             SGTLCE LLM +AY+ N++ PNK +       +DPE   + + +  ++++GG V+ L+ G
Sbjct:   568 SGTLCEQLLMAEAYRKNILFPNKSKPIYNQYFTDPEN-KKKYFIYDDSFVGGTVQSLKCG 626

Query:   521 VFRSDLPTSFKLDPSAYEQLLNNLDRDLQYAIKVE-GK---------MDLESVSNYDEVK 570
             ++R DL   F LD   Y+ L N++D  + + I+ +  K         ++   + N D++K
Sbjct:   627 IYRDDLKEFFSLDVDTYKYLYNSIDHIIDFWIQKDLNKNANINDTKYINKNQIINLDQIK 686

Query:   571 NAIMEKLLRLQEEPIREECPLIYHLDVAAMYPNIILTNRLQPPSIVTDEVCTACDFNRPG 630
               I  KL    E P    CP IYHLDVAAMYPNIIL++RLQP +I+T + C  C F +  
Sbjct:   687 QDIKNKLNFFIENPNINICPNIYHLDVAAMYPNIILSHRLQPNAIITPDHCFNCSFYKQR 746

Query:   631 KTCLRKLEWVWRGEIFMGKRSDYYHL 656
               C +K+ W  + EI      DY H+
Sbjct:   747 HLCQKKMIWKRKLEI---SPIDYGHV 769

 Score = 644 (231.8 bits), Expect = 1.2e-221, Sum P(9) = 1.2e-221
 Identities = 157/438 (35%), Positives = 251/438 (57%)

Query:   861 YPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEFEVDGPYKAMILPASKEEGIL 920
             +P  +LN ++ +  TNDQY  + +  +  YE  S+  I FE+DGP+  M LPAS++   L
Sbjct:  1023 FPTNILNFEMHKKWTNDQY-LVYNEHTDDYECISKNEIFFELDGPWHGMFLPASEKSDDL 1081

Query:   921 IKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFLHGSTIEECYSAVAAVAN 980
             +KKRY VFN+   ++ELKGFEIKRRGEL++I+ FQ+E+F+ FL G T EE Y   +  AN
Sbjct:  1082 LKKRYVVFNNKYKISELKGFEIKRRGELRIIQRFQSEIFNHFLKGKTKEESYYHASLTAN 1141

Query:   981 RWLDLLDNQGKDIA-DSELIDYISESSTMSKSLADYGEQKSCAVTTARRLSDFLGD-TMV 1038
             +W +L+D +  DI  D EL D I     ++KS+ +    KS  +TTA+RLS+ L + + +
Sbjct:  1142 KWKNLIDTKAIDIDNDDELFDLILAKKVLNKSVKEQPNAKSFGITTAKRLSELLNNASYI 1201

Query:  1039 KDKGLRCQYIVACEPQGTPVSERAVPVAIFETDAEIMKFYLRKWCKT----SSDVGIRSI 1094
             +D  +  Q+IV  +P G+ ++ RA+P+ IF+T+ +    YL KW  T    +  V +R I
Sbjct:  1202 EDNNVSTQFIVVSKPIGSDITFRAIPIQIFKTNIDTQIHYLSKWLGTKFPPNVPVNVRDI 1261

Query:  1095 VDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLYKKVREKEDKFRQRKLVDIF 1154
             +DW YYKQ+L   I K++ IPA  Q ++NP+  +  PDWL K++   E K  Q+K+   F
Sbjct:  1262 IDWDYYKQKLEVQILKLVIIPAIKQNINNPITSISVPDWLKKQINISEGK--QKKITSFF 1319

Query:  1155 --SSLKKDDFLNKTCNAETNLMDENVEDLEDFPKKRRNSVNGPRPIVRCFEVNNEQKTVK 1212
                ++KK+D  +   +A+  L    V D+ DF K    + N P    +   + N++    
Sbjct:  1320 VKKNIKKEDTTSPLHSADVKL----VNDIHDF-KDSNETTNTPLHYTQKESMKNKEHISN 1374

Query:  1213 TTDQVDSLRQQLEPSEVSDQQPSSQNAIDTENIDRIVDYKGWLELKKRKWKDNLDRRKKQ 1272
              + +  S    +E  E +   PSS  +I T++ + + + K   +L K+   DN    KKQ
Sbjct:  1375 QSMEKKS-PFPIE-GENTITNPSS--SILTQSEETLKNKKR--KLIKQYLLDNFIS-KKQ 1427

Query:  1273 KLGSLRASHQANGVSESL 1290
             KL  L  ++Q+N  + ++
Sbjct:  1428 KLIILYDNNQSNNNNSNI 1445

 Score = 444 (161.4 bits), Expect = 1.2e-221, Sum P(9) = 1.2e-221
 Identities = 98/208 (47%), Positives = 131/208 (62%)

Query:   645 IFMGKRSDYYHLKKQIESEFVDGTNG-----HLSKSFLDLPKMEQQSRLKDRLKKYCQKA 699
             +F  ++S +Y ++ + ES+  +  N         KS+ +L   +Q   L   +K   QK 
Sbjct:   780 LFFPQKS-FYKMQNKEESDSTENENSMDINASKKKSWNELTDKQQHDELMKVIKDCSQKV 838

Query:   700 YKRVLDKPVTELREAG-ICMRENSFYVDTVRSFRDRRYEYK-GLNKVWKGKLSEAKASG- 756
             +K+   K   E+  +  +C REN FYVD V++FRDRRY YK GL +    K    K S  
Sbjct:   839 FKKT--KVSKEVDASSLVCQRENPFYVDAVKTFRDRRYVYKKGLKECEHEKRELLKQSKI 896

Query:   757 NSIKIQEAQDMVVLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNA 816
             + IKIQE  D ++L DSLQLAHKCILNSFYGYV R+ +RWYS +M  +VTYTG++II  A
Sbjct:   897 DYIKIQELDDKILLNDSLQLAHKCILNSFYGYVKRRSSRWYSDQMGAIVTYTGSQIINGA 956

Query:   817 RLLIEKIGKPLELDTDGIWCVLPGSFPE 844
               LI KIG P+ELDTDGIWC+LP +FPE
Sbjct:   957 FNLINKIGIPMELDTDGIWCMLPKNFPE 984

 Score = 168 (64.2 bits), Expect = 1.2e-221, Sum P(9) = 1.2e-221
 Identities = 39/135 (28%), Positives = 78/135 (57%)

Query:    37 SEGDKRLGWLLTFASSSLE--DEDTRKVY--SCIDLYFVSQDGSTFKSKYKFRPYFYAAT 92
             ++G+K  G+L     +++    +++ K +  + + +YFVS +  T++    +RPYFY  T
Sbjct:    39 NKGEKE-GYLYNIVPTTMNVVAKNSNKSHKKTGVHMYFVSDNNKTWRLTLFYRPYFYLKT 97

Query:    93 KEKMEMD-VEAYLRRRYESQIADIEILEKEDLDLKNHL----SGLHKSYLKISFDTVQQL 147
             K     + V  +L++  +    +I+ ++KEDL L +HL    S L   + K+S+DT++ L
Sbjct:    98 KNIHNYEQVTKFLKKELDKYNVEIDYVKKEDLSLYDHLNKKRSYLSNIFFKLSYDTIENL 157

Query:   148 MDVKKDLLHVVERNQ 162
             M+ +  L+ ++ERN+
Sbjct:   158 MNARDFLVKIIERNK 172

 Score = 140 (54.3 bits), Expect = 1.2e-221, Sum P(9) = 1.2e-221
 Identities = 32/132 (24%), Positives = 57/132 (43%)

Query:  1854 FRDPCPSFILPNVICSYC------NXXXXXXXXXXXXXXXQDWHCAMPQCGQPYDREVME 1907
             ++ PC   IL ++ C +C      N                 W C    C   +D E +E
Sbjct:  2768 WKSPCHELILKDIFCDHCSSVYHMNVVTSLVEAEISGKPSFIWLCK--NCNFKFDNEFIE 2825

Query:  1908 NALLQIVRQRERLYHLQDLVCIRCNQVKAAHLAEQCACAGSFRCKEDASDFRSKMQIFLN 1967
               +L ++++    Y+ QDLVC  CN +K+ H    C C   F  + + +++   ++I  N
Sbjct:  2826 LKILSLLQETFDAYNAQDLVCNNCNAIKSFHRRPICKCGQIFTPRLEINNWMQTLEIVEN 2885

Query:  1968 IANRQGFQLLQE 1979
             +A+     LL +
Sbjct:  2886 LASMLNMPLLTD 2897

 Score = 75 (31.5 bits), Expect = 1.2e-221, Sum P(9) = 1.2e-221
 Identities = 32/158 (20%), Positives = 72/158 (45%)

Query:  1569 ILQHLYRWLCSPHSKLHDPVLHRILHKVMQ--KVFAMLLAEF--RKLGATIIFANFSKVI 1624
             I    Y W+ +  S L+D  L+   +KV++  +++   L     +K  A IIFA+   ++
Sbjct:  2407 IFTSFYSWISNNSSLLYDVALY---NKVLECSEIYQNNLINIMKKKFNANIIFADLRNLV 2463

Query:  1625 IDTGKFDLSAAKAYCDSLLKALQTRE-LFEWIELEPVHFWHSLLFMDQYNYGGIPARADE 1683
             I   ++ + + +    +L+K     + ++  +     + + +    D+YN+     R  +
Sbjct:  2464 ISFNEYSIISGRNILKNLIKYFSHSDSIYANVPFYIKNEYIAACQFDKYNF----IRY-K 2518

Query:  1684 SLDDDSQVDIVSSWNIAEYLPKEIQDHFVLVVSEFMYI 1721
                D ++ +   +  I EYLP  I + F+  V + + +
Sbjct:  2519 KYSDPNEENTDENLKIIEYLPP-ICESFLRYVLDIIIL 2555

 Score = 52 (23.4 bits), Expect = 4.5e-17, Sum P(7) = 4.5e-17
 Identities = 16/62 (25%), Positives = 33/62 (53%)

Query:  1134 LYKKVREKEDKFRQRKLVDIFSSLKKDDFLNKTCNAETNLMDENVEDLED---FPKKRRN 1190
             L+ KV+ +ED        ++++ L + + LNK   A  N++  ++E  +D   FP K ++
Sbjct:   309 LWYKVKREED--------ELYTELIQFEILNKKVLAPLNILAWDIECYKDELKFPDKEKD 360

Query:  1191 SV 1192
              +
Sbjct:   361 EI 362

 Score = 51 (23.0 bits), Expect = 1.2e-221, Sum P(9) = 1.2e-221
 Identities = 9/38 (23%), Positives = 21/38 (55%)

Query:  1250 DYKGWLELKKRKWKDNLDRRKKQKLGSLRASHQANGVS 1287
             ++K W+ +  + WK+N  + KK ++   +   + N +S
Sbjct:  1503 NFKNWMLINNKIWKNNRTQIKKIRIED-KKQKKKNSIS 1539

 Score = 51 (23.0 bits), Expect = 4.5e-159, Sum P(8) = 4.5e-159
 Identities = 20/65 (30%), Positives = 33/65 (50%)

Query:  1133 WLYKKVREKEDKFRQRKLVDI-FSSLKKDD--FLN---KTCNAETNL-MDENVEDLEDFP 1185
             ++YKK+++K+ K  ++K  +I  ++LK D    L    K    E N   D N +D     
Sbjct:  1577 YIYKKIKKKK-KNHKKKNANIQLNNLKNDKQTLLKPYLKYFKHEANSDSDSNSDDSSSHK 1635

Query:  1186 KKRRN 1190
             K+ RN
Sbjct:  1636 KESRN 1640

 Score = 49 (22.3 bits), Expect = 3.1e-159, Sum P(7) = 3.1e-159
 Identities = 21/112 (18%), Positives = 50/112 (44%)

Query:  1145 FRQRKLVDIFSSLKKD--DFLNKTCNAETNLMDENVEDLEDFPKKRRNSV-NGPRPIVRC 1201
             F   +L   +S+L K+  ++ N   N  TN+ + +  ++ +   +    + N  + + R 
Sbjct:  2186 FNSVRLFTKYSNLDKNTNEYNNTITNTNTNINNYHNNNIINRNNEHTTFMQNKKKNVKRT 2245

Query:  1202 FE--------VNNEQKTVKTTDQVDSLRQQLEPSEVSD-QQPSSQNAIDTEN 1244
              E        +NN+   +   D +D  ++QL   ++S   + ++ N+ +  N
Sbjct:  2246 LENNTNHMNKLNNKSNHINKNDSIDQ-KEQLNDEDISTADENNNMNSNNNNN 2296

 Score = 47 (21.6 bits), Expect = 1.4e-16, Sum P(7) = 1.4e-16
 Identities = 22/83 (26%), Positives = 40/83 (48%)

Query:   922 KKRYAVFNDD---GTLAELK-GFEIKRRGELKLIKVFQAELFDKFLHGSTIEECYSAVAA 977
             KK+Y +++D    GT+  LK G     R +LK       E F   L   T +  Y+++  
Sbjct:   605 KKKYFIYDDSFVGGTVQSLKCGIY---RDDLK-------EFFS--LDVDTYKYLYNSIDH 652

Query:   978 VANRWLDLLDNQGKDIADSELID 1000
             + + W+    N+  +I D++ I+
Sbjct:   653 IIDFWIQKDLNKNANINDTKYIN 675

 Score = 46 (21.3 bits), Expect = 1.5e-158, Sum P(8) = 1.5e-158
 Identities = 21/78 (26%), Positives = 38/78 (48%)

Query:  1136 KKVREKEDKFRQRKLVDIFSSLKKDDFLNKTCNAETNLMDENVEDLEDFPKKRRNSVNGP 1195
             KK+R  EDK +Q+K   I  S K+ +      + ETN   +N E + +   K  +++   
Sbjct:  1523 KKIRI-EDK-KQKKKNSI--SFKEQE------DEETNKEKKNYEKISNLDSKYLHTIQNS 1572

Query:  1196 RPIVRCFE-VNNEQKTVK 1212
               IV  ++ +  ++K  K
Sbjct:  1573 MDIVYIYKKIKKKKKNHK 1590

 Score = 46 (21.3 bits), Expect = 5.6e-117, Sum P(7) = 5.6e-117
 Identities = 22/88 (25%), Positives = 40/88 (45%)

Query:   687 RLKDRL-KKYCQKAYKRVLDKPVT-ELREAGICMRENSFYVDTVRSFRDRRYEYKGLNKV 744
             R++D+  KK    ++K   D+    E +        +S Y+ T+++  D  Y YK + K 
Sbjct:  1526 RIEDKKQKKKNSISFKEQEDEETNKEKKNYEKISNLDSKYLHTIQNSMDIVYIYKKIKKK 1585

Query:   745 WKG-KLSEAKASGNSIKIQEAQDMVVLY 771
              K  K   A    N++K  + Q ++  Y
Sbjct:  1586 KKNHKKKNANIQLNNLK-NDKQTLLKPY 1612

 Score = 45 (20.9 bits), Expect = 3.1e-159, Sum P(7) = 3.1e-159
 Identities = 17/68 (25%), Positives = 30/68 (44%)

Query:   867 NVDVARNNTNDQYQTLVDPVSKTYETHSECSIEFEVDGPYKAMILPASKEEGILIKKRYA 926
             N ++  NN  +  QTL+ P  K Y  H E + + + +    +     S+ E   I ++  
Sbjct:  1593 NANIQLNNLKNDKQTLLKPYLK-YFKH-EANSDSDSNSDDSSSHKKESRNENYHINEKVD 1650

Query:   927 ---VFNDD 931
                 +NDD
Sbjct:  1651 NNDYYNDD 1658

 Score = 45 (20.9 bits), Expect = 0.00036, Sum P(5) = 0.00035
 Identities = 33/139 (23%), Positives = 54/139 (38%)

Query:  1129 VHPDWLYKKVREKEDKFRQRK--LVDIFSSLKKDDFLNKTCNAETNLMDENVEDLEDFPK 1186
             V  D++ K+     D   +++  L +IF  L  D   N       N  D  V+ +E   K
Sbjct:   119 VEIDYVKKEDLSLYDHLNKKRSYLSNIFFKLSYDTIENLM-----NARDFLVKIIERNKK 173

Query:  1187 KRRNSVNGPRPIVRCFEVNNEQKTVKTTDQVDSLRQQLEPSEVSDQQPSSQNAIDTENID 1246
             + +N  N        F  NNE  +    +   S + +   ++  DQ+ ++Q    T NI 
Sbjct:   174 QNKN-YNNSNNDKHIF--NNEDLSYSQLEF--SYKNEYSYNKYDDQKENTQKQQFTTNIT 228

Query:  1247 RIVDYKGWLELKKRKWKDN 1265
                D K  L  K     +N
Sbjct:   229 EEDDKKRILNAKSNDNNNN 247

 Score = 44 (20.5 bits), Expect = 1.2e-221, Sum P(9) = 1.2e-221
 Identities = 26/94 (27%), Positives = 36/94 (38%)

Query:  1442 LARYAHILWISDDGVPDLGGTSEEDECFAD----EVHQPVLTYPGAYRKVSVELKIHHLS 1497
             + +Y  ILW+S  G  DLG        F D    + +  ++   G YR   V     HL 
Sbjct:  2126 IKKYKGILWLSYFGNYDLGIPCLNINNFCDYDLAKKNNDIINQ-GIYRGYIV-----HLF 2179

Query:  1498 VNALLKSNQVNEMEGGGLFGFDQDMNSGPYNNEL 1531
              N  L  N V           + D N+  YNN +
Sbjct:  2180 FNESLIFNSVRLFTKYS----NLDKNTNEYNNTI 2209

 Score = 43 (20.2 bits), Expect = 0.00016, Sum P(6) = 0.00016
 Identities = 10/49 (20%), Positives = 27/49 (55%)

Query:  1129 VHPDWLYKKVREKEDKFRQRKLVDIFSSLKKDDFLNKTCNAETNLMDEN 1177
             ++PD+ Y+++ + E+KF  +  ++     +K+ +L        N++ +N
Sbjct:    16 INPDYEYERLLKLENKFHIKAWIN---KGEKEGYLYNIVPTTMNVVAKN 61

 Score = 42 (19.8 bits), Expect = 1.2e-221, Sum P(9) = 1.2e-221
 Identities = 16/49 (32%), Positives = 23/49 (46%)

Query:  1350 ITVPRLFYLNSKDPIVEKFPGRRVNKTLPHGRRSFNLIEVMIDEDQFRK 1398
             IT+ +L   N+ D  V K      N  LP   + FNL E ++ E  F +
Sbjct:  1707 ITI-KLISSNNDDNGVFKSKAY-ANCFLPRNIKVFNLYEFIMTEKYFNQ 1753

 Score = 39 (18.8 bits), Expect = 0.00036, Sum P(6) = 0.00036
 Identities = 29/118 (24%), Positives = 48/118 (40%)

Query:    49 FASSSLEDEDTRKVYSCIDLYFVSQDGSTFKSKYKFR--PYFYAATKEKME--------- 97
             F   +++ EDT       D+  V+ D   FK   +    P  Y   KE M+         
Sbjct:  1319 FVKKNIKKEDTTSPLHSADVKLVN-DIHDFKDSNETTNTPLHYTQ-KESMKNKEHISNQS 1376

Query:    98 MDVEAYLRRRYESQIAD--IEILEKEDLDLKNHLSGLHKSYLKISFDTVQQLMDVKKD 153
             M+ ++      E+ I +    IL + +  LKN    L K YL  +F + +Q + +  D
Sbjct:  1377 MEKKSPFPIEGENTITNPSSSILTQSEETLKNKKRKLIKQYLLDNFISKKQKLIILYD 1434

 Score = 38 (18.4 bits), Expect = 4.4e-158, Sum P(7) = 4.4e-158
 Identities = 14/88 (15%), Positives = 38/88 (43%)

Query:  1141 KEDKFRQRKLV--DIFSSLKKDDFLNKTCNAETNLMDENVEDLEDFPKKRRNSVNGPRPI 1198
             K D   Q++ +  +  S+  +++ +N   N   N  + N  +  +      N+ N     
Sbjct:  2265 KNDSIDQKEQLNDEDISTADENNNMNSNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNS 2324

Query:  1199 VRC-FEVNNEQKTVKTTDQVDSLRQQLE 1225
             V   F  NN+   ++++ +++  +  ++
Sbjct:  2325 VNVNFSSNNDNVIIQSSAELNQKKNLIQ 2352

 Score = 38 (18.4 bits), Expect = 3.8e-116, Sum P(7) = 3.8e-116
 Identities = 14/61 (22%), Positives = 29/61 (47%)

Query:  1219 SLRQQLE-----PSEVSDQQPSSQNAIDTENIDRIVDYKGWLELKKRKWKDNLDRRKKQK 1273
             SL+Q L+     P +   +  + + +  TEN +  +D       KK+ W +  D+++  +
Sbjct:   771 SLKQDLKTRLFFPQKSFYKMQNKEESDSTEN-ENSMDINA---SKKKSWNELTDKQQHDE 826

Query:  1274 L 1274
             L
Sbjct:   827 L 827

 Score = 38 (18.4 bits), Expect = 1.5e-65, Sum P(7) = 1.5e-65
 Identities = 12/46 (26%), Positives = 24/46 (52%)

Query:    96 MEMDVEAY---LRRRYESQIADIEILEKEDLDLKNHLSGLHKSYLK 138
             ME+D +     L + +  ++ D+ IL+K++L+ K       +  LK
Sbjct:   967 MELDTDGIWCMLPKNFP-EMYDVYILDKKELNKKKDYETKSEEELK 1011

 Score = 37 (18.1 bits), Expect = 1.2e-15, Sum P(7) = 1.2e-15
 Identities = 7/16 (43%), Positives = 10/16 (62%)

Query:   561 ESVSNYDEVKNAIMEK 576
             ES+ N + + N  MEK
Sbjct:  1364 ESMKNKEHISNQSMEK 1379


>UNIPROTKB|C6KTD8 [details] [associations]
            symbol:PFF1470c "DNA polymerase epsilon, catalytic subunit
            a, putative" species:36329 "Plasmodium falciparum 3D7" [GO:0003887
            "DNA-directed DNA polymerase activity" evidence=ISS] [GO:0006261
            "DNA-dependent DNA replication" evidence=ISS] [GO:0008622 "epsilon
            DNA polymerase complex" evidence=ISS] InterPro:IPR006133
            InterPro:IPR006172 InterPro:IPR012337 Pfam:PF03104 SMART:SM00486
            GO:GO:0000166 GO:GO:0003676 GO:GO:0006261 SUPFAM:SSF53098
            EMBL:AL844505 GO:GO:0008622 GO:GO:0003887 KO:K02324
            RefSeq:XP_966285.1 ProteinModelPortal:C6KTD8 IntAct:C6KTD8
            PRIDE:C6KTD8 EnsemblProtists:PFF1470c:mRNA GeneID:3885768
            KEGG:pfa:PFF1470c EuPathDB:PlasmoDB:PF3D7_0630300
            HOGENOM:HOG000281650 ProtClustDB:CLSZ2432328 Uniprot:C6KTD8
        Length = 2907

 Score = 992 (354.3 bits), Expect = 1.2e-221, Sum P(9) = 1.2e-221
 Identities = 210/506 (41%), Positives = 309/506 (61%)

Query:   174 ILTGKREQRPQDFLDCIVDLREYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLLEK-RVD 232
             + T K+    ++ ++ I+++ EYDV Y  R  ID ++RCG WY V         E  + +
Sbjct:   269 VTTKKQILSKEEIMNEIIEIYEYDVKYLTRICIDKNIRCGLWYKVKREEDELYTELIQFE 328

Query:   233 LLQR---AEVHVCAFDIETTKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIED 289
             +L +   A +++ A+DIE  K  LKFPD + D I++ISYM + QGYLI+NR  + ++I +
Sbjct:   329 ILNKKVLAPLNILAWDIECYKDELKFPDKEKDEIILISYMYNAQGYLIVNRNVMSKNIRE 388

Query:   290 LEYTPKPEFEGY--FKVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAA 347
               Y P  E+ G   FK+ N  NE  LL+ +  H++ +K  I+VTYNGD+FD P+L  R  
Sbjct:   389 FLYKPNEEYSGAGTFKIFNEKNEYFLLKRFLEHIRLLKIHIFVTYNGDFFDIPYLYRRCE 448

Query:   348 HHGFKMSEELGFQCDKNQGECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDP 407
              +   +S E+GF  +  Q EC   F  ++D + WV+RDSYLP GS+ LK+V K KL Y+P
Sbjct:   449 INNLSVSREIGFIMNNKQ-ECSCNFILNIDAYKWVERDSYLPNGSRTLKSVCKIKLKYNP 507

Query:   408 LEVNPEDMVRFAKEKPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKG 467
              EV+PE MV  AK  PQ +A YSVSDAVAT+YLY  ++H F+F+L++IIPM+PD VLR+G
Sbjct:   508 TEVDPELMVPIAKNNPQHLAVYSVSDAVATFYLYDKFIHNFLFALSSIIPMNPDNVLRQG 567

Query:   468 SGTLCEMLLMVQAYKANVICPNKHQ-------SDPEKFYRNHLLESETYIGGHVECLESG 520
             SGTLCE LLM +AY+ N++ PNK +       +DPE   + + +  ++++GG V+ L+ G
Sbjct:   568 SGTLCEQLLMAEAYRKNILFPNKSKPIYNQYFTDPEN-KKKYFIYDDSFVGGTVQSLKCG 626

Query:   521 VFRSDLPTSFKLDPSAYEQLLNNLDRDLQYAIKVE-GK---------MDLESVSNYDEVK 570
             ++R DL   F LD   Y+ L N++D  + + I+ +  K         ++   + N D++K
Sbjct:   627 IYRDDLKEFFSLDVDTYKYLYNSIDHIIDFWIQKDLNKNANINDTKYINKNQIINLDQIK 686

Query:   571 NAIMEKLLRLQEEPIREECPLIYHLDVAAMYPNIILTNRLQPPSIVTDEVCTACDFNRPG 630
               I  KL    E P    CP IYHLDVAAMYPNIIL++RLQP +I+T + C  C F +  
Sbjct:   687 QDIKNKLNFFIENPNINICPNIYHLDVAAMYPNIILSHRLQPNAIITPDHCFNCSFYKQR 746

Query:   631 KTCLRKLEWVWRGEIFMGKRSDYYHL 656
               C +K+ W  + EI      DY H+
Sbjct:   747 HLCQKKMIWKRKLEI---SPIDYGHV 769

 Score = 644 (231.8 bits), Expect = 1.2e-221, Sum P(9) = 1.2e-221
 Identities = 157/438 (35%), Positives = 251/438 (57%)

Query:   861 YPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEFEVDGPYKAMILPASKEEGIL 920
             +P  +LN ++ +  TNDQY  + +  +  YE  S+  I FE+DGP+  M LPAS++   L
Sbjct:  1023 FPTNILNFEMHKKWTNDQY-LVYNEHTDDYECISKNEIFFELDGPWHGMFLPASEKSDDL 1081

Query:   921 IKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFLHGSTIEECYSAVAAVAN 980
             +KKRY VFN+   ++ELKGFEIKRRGEL++I+ FQ+E+F+ FL G T EE Y   +  AN
Sbjct:  1082 LKKRYVVFNNKYKISELKGFEIKRRGELRIIQRFQSEIFNHFLKGKTKEESYYHASLTAN 1141

Query:   981 RWLDLLDNQGKDIA-DSELIDYISESSTMSKSLADYGEQKSCAVTTARRLSDFLGD-TMV 1038
             +W +L+D +  DI  D EL D I     ++KS+ +    KS  +TTA+RLS+ L + + +
Sbjct:  1142 KWKNLIDTKAIDIDNDDELFDLILAKKVLNKSVKEQPNAKSFGITTAKRLSELLNNASYI 1201

Query:  1039 KDKGLRCQYIVACEPQGTPVSERAVPVAIFETDAEIMKFYLRKWCKT----SSDVGIRSI 1094
             +D  +  Q+IV  +P G+ ++ RA+P+ IF+T+ +    YL KW  T    +  V +R I
Sbjct:  1202 EDNNVSTQFIVVSKPIGSDITFRAIPIQIFKTNIDTQIHYLSKWLGTKFPPNVPVNVRDI 1261

Query:  1095 VDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLYKKVREKEDKFRQRKLVDIF 1154
             +DW YYKQ+L   I K++ IPA  Q ++NP+  +  PDWL K++   E K  Q+K+   F
Sbjct:  1262 IDWDYYKQKLEVQILKLVIIPAIKQNINNPITSISVPDWLKKQINISEGK--QKKITSFF 1319

Query:  1155 --SSLKKDDFLNKTCNAETNLMDENVEDLEDFPKKRRNSVNGPRPIVRCFEVNNEQKTVK 1212
                ++KK+D  +   +A+  L    V D+ DF K    + N P    +   + N++    
Sbjct:  1320 VKKNIKKEDTTSPLHSADVKL----VNDIHDF-KDSNETTNTPLHYTQKESMKNKEHISN 1374

Query:  1213 TTDQVDSLRQQLEPSEVSDQQPSSQNAIDTENIDRIVDYKGWLELKKRKWKDNLDRRKKQ 1272
              + +  S    +E  E +   PSS  +I T++ + + + K   +L K+   DN    KKQ
Sbjct:  1375 QSMEKKS-PFPIE-GENTITNPSS--SILTQSEETLKNKKR--KLIKQYLLDNFIS-KKQ 1427

Query:  1273 KLGSLRASHQANGVSESL 1290
             KL  L  ++Q+N  + ++
Sbjct:  1428 KLIILYDNNQSNNNNSNI 1445

 Score = 444 (161.4 bits), Expect = 1.2e-221, Sum P(9) = 1.2e-221
 Identities = 98/208 (47%), Positives = 131/208 (62%)

Query:   645 IFMGKRSDYYHLKKQIESEFVDGTNG-----HLSKSFLDLPKMEQQSRLKDRLKKYCQKA 699
             +F  ++S +Y ++ + ES+  +  N         KS+ +L   +Q   L   +K   QK 
Sbjct:   780 LFFPQKS-FYKMQNKEESDSTENENSMDINASKKKSWNELTDKQQHDELMKVIKDCSQKV 838

Query:   700 YKRVLDKPVTELREAG-ICMRENSFYVDTVRSFRDRRYEYK-GLNKVWKGKLSEAKASG- 756
             +K+   K   E+  +  +C REN FYVD V++FRDRRY YK GL +    K    K S  
Sbjct:   839 FKKT--KVSKEVDASSLVCQRENPFYVDAVKTFRDRRYVYKKGLKECEHEKRELLKQSKI 896

Query:   757 NSIKIQEAQDMVVLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNA 816
             + IKIQE  D ++L DSLQLAHKCILNSFYGYV R+ +RWYS +M  +VTYTG++II  A
Sbjct:   897 DYIKIQELDDKILLNDSLQLAHKCILNSFYGYVKRRSSRWYSDQMGAIVTYTGSQIINGA 956

Query:   817 RLLIEKIGKPLELDTDGIWCVLPGSFPE 844
               LI KIG P+ELDTDGIWC+LP +FPE
Sbjct:   957 FNLINKIGIPMELDTDGIWCMLPKNFPE 984

 Score = 168 (64.2 bits), Expect = 1.2e-221, Sum P(9) = 1.2e-221
 Identities = 39/135 (28%), Positives = 78/135 (57%)

Query:    37 SEGDKRLGWLLTFASSSLE--DEDTRKVY--SCIDLYFVSQDGSTFKSKYKFRPYFYAAT 92
             ++G+K  G+L     +++    +++ K +  + + +YFVS +  T++    +RPYFY  T
Sbjct:    39 NKGEKE-GYLYNIVPTTMNVVAKNSNKSHKKTGVHMYFVSDNNKTWRLTLFYRPYFYLKT 97

Query:    93 KEKMEMD-VEAYLRRRYESQIADIEILEKEDLDLKNHL----SGLHKSYLKISFDTVQQL 147
             K     + V  +L++  +    +I+ ++KEDL L +HL    S L   + K+S+DT++ L
Sbjct:    98 KNIHNYEQVTKFLKKELDKYNVEIDYVKKEDLSLYDHLNKKRSYLSNIFFKLSYDTIENL 157

Query:   148 MDVKKDLLHVVERNQ 162
             M+ +  L+ ++ERN+
Sbjct:   158 MNARDFLVKIIERNK 172

 Score = 140 (54.3 bits), Expect = 1.2e-221, Sum P(9) = 1.2e-221
 Identities = 32/132 (24%), Positives = 57/132 (43%)

Query:  1854 FRDPCPSFILPNVICSYC------NXXXXXXXXXXXXXXXQDWHCAMPQCGQPYDREVME 1907
             ++ PC   IL ++ C +C      N                 W C    C   +D E +E
Sbjct:  2768 WKSPCHELILKDIFCDHCSSVYHMNVVTSLVEAEISGKPSFIWLCK--NCNFKFDNEFIE 2825

Query:  1908 NALLQIVRQRERLYHLQDLVCIRCNQVKAAHLAEQCACAGSFRCKEDASDFRSKMQIFLN 1967
               +L ++++    Y+ QDLVC  CN +K+ H    C C   F  + + +++   ++I  N
Sbjct:  2826 LKILSLLQETFDAYNAQDLVCNNCNAIKSFHRRPICKCGQIFTPRLEINNWMQTLEIVEN 2885

Query:  1968 IANRQGFQLLQE 1979
             +A+     LL +
Sbjct:  2886 LASMLNMPLLTD 2897

 Score = 75 (31.5 bits), Expect = 1.2e-221, Sum P(9) = 1.2e-221
 Identities = 32/158 (20%), Positives = 72/158 (45%)

Query:  1569 ILQHLYRWLCSPHSKLHDPVLHRILHKVMQ--KVFAMLLAEF--RKLGATIIFANFSKVI 1624
             I    Y W+ +  S L+D  L+   +KV++  +++   L     +K  A IIFA+   ++
Sbjct:  2407 IFTSFYSWISNNSSLLYDVALY---NKVLECSEIYQNNLINIMKKKFNANIIFADLRNLV 2463

Query:  1625 IDTGKFDLSAAKAYCDSLLKALQTRE-LFEWIELEPVHFWHSLLFMDQYNYGGIPARADE 1683
             I   ++ + + +    +L+K     + ++  +     + + +    D+YN+     R  +
Sbjct:  2464 ISFNEYSIISGRNILKNLIKYFSHSDSIYANVPFYIKNEYIAACQFDKYNF----IRY-K 2518

Query:  1684 SLDDDSQVDIVSSWNIAEYLPKEIQDHFVLVVSEFMYI 1721
                D ++ +   +  I EYLP  I + F+  V + + +
Sbjct:  2519 KYSDPNEENTDENLKIIEYLPP-ICESFLRYVLDIIIL 2555

 Score = 52 (23.4 bits), Expect = 4.5e-17, Sum P(7) = 4.5e-17
 Identities = 16/62 (25%), Positives = 33/62 (53%)

Query:  1134 LYKKVREKEDKFRQRKLVDIFSSLKKDDFLNKTCNAETNLMDENVEDLED---FPKKRRN 1190
             L+ KV+ +ED        ++++ L + + LNK   A  N++  ++E  +D   FP K ++
Sbjct:   309 LWYKVKREED--------ELYTELIQFEILNKKVLAPLNILAWDIECYKDELKFPDKEKD 360

Query:  1191 SV 1192
              +
Sbjct:   361 EI 362

 Score = 51 (23.0 bits), Expect = 1.2e-221, Sum P(9) = 1.2e-221
 Identities = 9/38 (23%), Positives = 21/38 (55%)

Query:  1250 DYKGWLELKKRKWKDNLDRRKKQKLGSLRASHQANGVS 1287
             ++K W+ +  + WK+N  + KK ++   +   + N +S
Sbjct:  1503 NFKNWMLINNKIWKNNRTQIKKIRIED-KKQKKKNSIS 1539

 Score = 51 (23.0 bits), Expect = 4.5e-159, Sum P(8) = 4.5e-159
 Identities = 20/65 (30%), Positives = 33/65 (50%)

Query:  1133 WLYKKVREKEDKFRQRKLVDI-FSSLKKDD--FLN---KTCNAETNL-MDENVEDLEDFP 1185
             ++YKK+++K+ K  ++K  +I  ++LK D    L    K    E N   D N +D     
Sbjct:  1577 YIYKKIKKKK-KNHKKKNANIQLNNLKNDKQTLLKPYLKYFKHEANSDSDSNSDDSSSHK 1635

Query:  1186 KKRRN 1190
             K+ RN
Sbjct:  1636 KESRN 1640

 Score = 49 (22.3 bits), Expect = 3.1e-159, Sum P(7) = 3.1e-159
 Identities = 21/112 (18%), Positives = 50/112 (44%)

Query:  1145 FRQRKLVDIFSSLKKD--DFLNKTCNAETNLMDENVEDLEDFPKKRRNSV-NGPRPIVRC 1201
             F   +L   +S+L K+  ++ N   N  TN+ + +  ++ +   +    + N  + + R 
Sbjct:  2186 FNSVRLFTKYSNLDKNTNEYNNTITNTNTNINNYHNNNIINRNNEHTTFMQNKKKNVKRT 2245

Query:  1202 FE--------VNNEQKTVKTTDQVDSLRQQLEPSEVSD-QQPSSQNAIDTEN 1244
              E        +NN+   +   D +D  ++QL   ++S   + ++ N+ +  N
Sbjct:  2246 LENNTNHMNKLNNKSNHINKNDSIDQ-KEQLNDEDISTADENNNMNSNNNNN 2296

 Score = 47 (21.6 bits), Expect = 1.4e-16, Sum P(7) = 1.4e-16
 Identities = 22/83 (26%), Positives = 40/83 (48%)

Query:   922 KKRYAVFNDD---GTLAELK-GFEIKRRGELKLIKVFQAELFDKFLHGSTIEECYSAVAA 977
             KK+Y +++D    GT+  LK G     R +LK       E F   L   T +  Y+++  
Sbjct:   605 KKKYFIYDDSFVGGTVQSLKCGIY---RDDLK-------EFFS--LDVDTYKYLYNSIDH 652

Query:   978 VANRWLDLLDNQGKDIADSELID 1000
             + + W+    N+  +I D++ I+
Sbjct:   653 IIDFWIQKDLNKNANINDTKYIN 675

 Score = 46 (21.3 bits), Expect = 1.5e-158, Sum P(8) = 1.5e-158
 Identities = 21/78 (26%), Positives = 38/78 (48%)

Query:  1136 KKVREKEDKFRQRKLVDIFSSLKKDDFLNKTCNAETNLMDENVEDLEDFPKKRRNSVNGP 1195
             KK+R  EDK +Q+K   I  S K+ +      + ETN   +N E + +   K  +++   
Sbjct:  1523 KKIRI-EDK-KQKKKNSI--SFKEQE------DEETNKEKKNYEKISNLDSKYLHTIQNS 1572

Query:  1196 RPIVRCFE-VNNEQKTVK 1212
               IV  ++ +  ++K  K
Sbjct:  1573 MDIVYIYKKIKKKKKNHK 1590

 Score = 46 (21.3 bits), Expect = 5.6e-117, Sum P(7) = 5.6e-117
 Identities = 22/88 (25%), Positives = 40/88 (45%)

Query:   687 RLKDRL-KKYCQKAYKRVLDKPVT-ELREAGICMRENSFYVDTVRSFRDRRYEYKGLNKV 744
             R++D+  KK    ++K   D+    E +        +S Y+ T+++  D  Y YK + K 
Sbjct:  1526 RIEDKKQKKKNSISFKEQEDEETNKEKKNYEKISNLDSKYLHTIQNSMDIVYIYKKIKKK 1585

Query:   745 WKG-KLSEAKASGNSIKIQEAQDMVVLY 771
              K  K   A    N++K  + Q ++  Y
Sbjct:  1586 KKNHKKKNANIQLNNLK-NDKQTLLKPY 1612

 Score = 45 (20.9 bits), Expect = 3.1e-159, Sum P(7) = 3.1e-159
 Identities = 17/68 (25%), Positives = 30/68 (44%)

Query:   867 NVDVARNNTNDQYQTLVDPVSKTYETHSECSIEFEVDGPYKAMILPASKEEGILIKKRYA 926
             N ++  NN  +  QTL+ P  K Y  H E + + + +    +     S+ E   I ++  
Sbjct:  1593 NANIQLNNLKNDKQTLLKPYLK-YFKH-EANSDSDSNSDDSSSHKKESRNENYHINEKVD 1650

Query:   927 ---VFNDD 931
                 +NDD
Sbjct:  1651 NNDYYNDD 1658

 Score = 45 (20.9 bits), Expect = 0.00036, Sum P(5) = 0.00035
 Identities = 33/139 (23%), Positives = 54/139 (38%)

Query:  1129 VHPDWLYKKVREKEDKFRQRK--LVDIFSSLKKDDFLNKTCNAETNLMDENVEDLEDFPK 1186
             V  D++ K+     D   +++  L +IF  L  D   N       N  D  V+ +E   K
Sbjct:   119 VEIDYVKKEDLSLYDHLNKKRSYLSNIFFKLSYDTIENLM-----NARDFLVKIIERNKK 173

Query:  1187 KRRNSVNGPRPIVRCFEVNNEQKTVKTTDQVDSLRQQLEPSEVSDQQPSSQNAIDTENID 1246
             + +N  N        F  NNE  +    +   S + +   ++  DQ+ ++Q    T NI 
Sbjct:   174 QNKN-YNNSNNDKHIF--NNEDLSYSQLEF--SYKNEYSYNKYDDQKENTQKQQFTTNIT 228

Query:  1247 RIVDYKGWLELKKRKWKDN 1265
                D K  L  K     +N
Sbjct:   229 EEDDKKRILNAKSNDNNNN 247

 Score = 44 (20.5 bits), Expect = 1.2e-221, Sum P(9) = 1.2e-221
 Identities = 26/94 (27%), Positives = 36/94 (38%)

Query:  1442 LARYAHILWISDDGVPDLGGTSEEDECFAD----EVHQPVLTYPGAYRKVSVELKIHHLS 1497
             + +Y  ILW+S  G  DLG        F D    + +  ++   G YR   V     HL 
Sbjct:  2126 IKKYKGILWLSYFGNYDLGIPCLNINNFCDYDLAKKNNDIINQ-GIYRGYIV-----HLF 2179

Query:  1498 VNALLKSNQVNEMEGGGLFGFDQDMNSGPYNNEL 1531
              N  L  N V           + D N+  YNN +
Sbjct:  2180 FNESLIFNSVRLFTKYS----NLDKNTNEYNNTI 2209

 Score = 43 (20.2 bits), Expect = 0.00016, Sum P(6) = 0.00016
 Identities = 10/49 (20%), Positives = 27/49 (55%)

Query:  1129 VHPDWLYKKVREKEDKFRQRKLVDIFSSLKKDDFLNKTCNAETNLMDEN 1177
             ++PD+ Y+++ + E+KF  +  ++     +K+ +L        N++ +N
Sbjct:    16 INPDYEYERLLKLENKFHIKAWIN---KGEKEGYLYNIVPTTMNVVAKN 61

 Score = 42 (19.8 bits), Expect = 1.2e-221, Sum P(9) = 1.2e-221
 Identities = 16/49 (32%), Positives = 23/49 (46%)

Query:  1350 ITVPRLFYLNSKDPIVEKFPGRRVNKTLPHGRRSFNLIEVMIDEDQFRK 1398
             IT+ +L   N+ D  V K      N  LP   + FNL E ++ E  F +
Sbjct:  1707 ITI-KLISSNNDDNGVFKSKAY-ANCFLPRNIKVFNLYEFIMTEKYFNQ 1753

 Score = 39 (18.8 bits), Expect = 0.00036, Sum P(6) = 0.00036
 Identities = 29/118 (24%), Positives = 48/118 (40%)

Query:    49 FASSSLEDEDTRKVYSCIDLYFVSQDGSTFKSKYKFR--PYFYAATKEKME--------- 97
             F   +++ EDT       D+  V+ D   FK   +    P  Y   KE M+         
Sbjct:  1319 FVKKNIKKEDTTSPLHSADVKLVN-DIHDFKDSNETTNTPLHYTQ-KESMKNKEHISNQS 1376

Query:    98 MDVEAYLRRRYESQIAD--IEILEKEDLDLKNHLSGLHKSYLKISFDTVQQLMDVKKD 153
             M+ ++      E+ I +    IL + +  LKN    L K YL  +F + +Q + +  D
Sbjct:  1377 MEKKSPFPIEGENTITNPSSSILTQSEETLKNKKRKLIKQYLLDNFISKKQKLIILYD 1434

 Score = 38 (18.4 bits), Expect = 4.4e-158, Sum P(7) = 4.4e-158
 Identities = 14/88 (15%), Positives = 38/88 (43%)

Query:  1141 KEDKFRQRKLV--DIFSSLKKDDFLNKTCNAETNLMDENVEDLEDFPKKRRNSVNGPRPI 1198
             K D   Q++ +  +  S+  +++ +N   N   N  + N  +  +      N+ N     
Sbjct:  2265 KNDSIDQKEQLNDEDISTADENNNMNSNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNS 2324

Query:  1199 VRC-FEVNNEQKTVKTTDQVDSLRQQLE 1225
             V   F  NN+   ++++ +++  +  ++
Sbjct:  2325 VNVNFSSNNDNVIIQSSAELNQKKNLIQ 2352

 Score = 38 (18.4 bits), Expect = 3.8e-116, Sum P(7) = 3.8e-116
 Identities = 14/61 (22%), Positives = 29/61 (47%)

Query:  1219 SLRQQLE-----PSEVSDQQPSSQNAIDTENIDRIVDYKGWLELKKRKWKDNLDRRKKQK 1273
             SL+Q L+     P +   +  + + +  TEN +  +D       KK+ W +  D+++  +
Sbjct:   771 SLKQDLKTRLFFPQKSFYKMQNKEESDSTEN-ENSMDINA---SKKKSWNELTDKQQHDE 826

Query:  1274 L 1274
             L
Sbjct:   827 L 827

 Score = 38 (18.4 bits), Expect = 1.5e-65, Sum P(7) = 1.5e-65
 Identities = 12/46 (26%), Positives = 24/46 (52%)

Query:    96 MEMDVEAY---LRRRYESQIADIEILEKEDLDLKNHLSGLHKSYLK 138
             ME+D +     L + +  ++ D+ IL+K++L+ K       +  LK
Sbjct:   967 MELDTDGIWCMLPKNFP-EMYDVYILDKKELNKKKDYETKSEEELK 1011

 Score = 37 (18.1 bits), Expect = 1.2e-15, Sum P(7) = 1.2e-15
 Identities = 7/16 (43%), Positives = 10/16 (62%)

Query:   561 ESVSNYDEVKNAIMEK 576
             ES+ N + + N  MEK
Sbjct:  1364 ESMKNKEHISNQSMEK 1379


>UNIPROTKB|F1LSZ5 [details] [associations]
            symbol:Pole "DNA polymerase" species:10116 "Rattus
            norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0003677 "DNA binding" evidence=IEA] [GO:0003887 "DNA-directed
            DNA polymerase activity" evidence=IEA] [GO:0006260 "DNA
            replication" evidence=IEA] InterPro:IPR006133 InterPro:IPR006134
            InterPro:IPR006172 InterPro:IPR012337 Pfam:PF00136 Pfam:PF03104
            SMART:SM00486 RGD:1594540 GO:GO:0000166 GO:GO:0003677 GO:GO:0006260
            SUPFAM:SSF53098 GO:GO:0003887 IPI:IPI00947849
            Ensembl:ENSRNOT00000068477 ArrayExpress:F1LSZ5 Uniprot:F1LSZ5
        Length = 719

 Score = 2049 (726.3 bits), Expect = 5.5e-212, P = 5.5e-212
 Identities = 400/653 (61%), Positives = 490/653 (75%)

Query:   340 PFLETRAAHHGFKMSEELGFQCDKNQGECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVT 399
             PF+E RAA HG  M +E+GFQ D +QGE +A    H+DC  WVKRDSYLP GS  LKA  
Sbjct:    36 PFVEARAAIHGLSMYQEIGFQKD-SQGEYKAPQCIHMDCLRWVKRDSYLPVGSHNLKAAA 94

Query:   400 KAKLGYDPLEVNPEDMVRFAKEKPQM---MASYSVSDAVATYYLYMTYVHPFIFSLATII 456
             KAKLGYDP+E++PEDM R A E+PQ    +A+YSVSDAVATYYLYM YVHPFIF+L TII
Sbjct:    95 KAKLGYDPVELDPEDMCRMATEQPQAHITLATYSVSDAVATYYLYMKYVHPFIFALCTII 154

Query:   457 PMSPDEVLRKGSGTLCEMLLMVQAYKANVICPNKHQSDPEKFYRN-HLLESETYIGGHVE 515
             PM PDEVLRKGSGTLCE LLMVQA+ AN+I PNK + +  K   + H+L++ETY+GGHVE
Sbjct:   155 PMEPDEVLRKGSGTLCEALLMVQAFHANIIFPNKQEQEFNKLTDDGHVLDAETYVGGHVE 214

Query:   516 CLESGVFRSDLPTSFKLDPSAYEQLLNNLDRDLQYAIKVEGKMDLESVSNYDEVKNAIME 575
              LESGVFRSD+P  F+++P+A++ LL  +++ +++AI+ E K+ +E  +N+ EV   I  
Sbjct:   215 ALESGVFRSDIPCRFRMNPAAFDFLLQRVEKTMRHAIEEEEKVPVEQATNFQEVCEQIKT 274

Query:   576 KLLRLQEEPIREECPLIYHLDVAAMYPNIILTNRLQPPSIVTDEVCTACDFNRPGKTCLR 635
             KL  L++ P R ECPLIYHLDV AMYPNIILTNRLQP +IV +  C ACDFN+PG TC R
Sbjct:   275 KLTSLKDVPNRIECPLIYHLDVGAMYPNIILTNRLQPSAIVDEATCAACDFNKPGATCQR 334

Query:   636 KLEWVWRGEIFMGKRSDYYHLKKQIESE-FVDGTNGHLSKSFLDLPKMEQQSRLKDRLKK 694
             K+ W WRGE     RS+Y+ ++ Q+ESE F        +++F +L + EQ    K RL  
Sbjct:   335 KMAWQWRGEFMPASRSEYHRIQHQLESEKFPPLFPEGPARAFHELSREEQAKYEKRRLAD 394

Query:   695 YCQKAYKRVLDKPVTELREAGICMRENSFYVDTVRSFRDRRYEYKGLNKVWKGKLSEAKA 754
             YC+KAYK++    V E R   IC RENSFYVDTVR+FRDRRYE+KGL+KVWK KLS A  
Sbjct:   395 YCRKAYKKIHMTKVEE-RLTTICQRENSFYVDTVRAFRDRRYEFKGLHKVWKKKLSAAVE 453

Query:   755 SGNSIKIQEAQDMVVLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQ 814
              G++ +++  ++M +LYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAG+V +TGA II 
Sbjct:   454 VGDASEVKRCKNMEILYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGIVCFTGANIIT 513

Query:   815 NARLLIEKIGKPLELDTDGIWCVLPGSFPENXXXXXXXXXX-XXXISYPCVMLNVDVARN 873
              AR LIE+IG+PLELDTDGIWCVLP SFPEN              ISYP  MLN+ V   
Sbjct:   514 QARELIEQIGRPLELDTDGIWCVLPNSFPENFVIKTTNVKKPKLTISYPGAMLNIMVKEG 573

Query:   874 NTNDQYQTLVDPVSKTYETHSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGT 933
              TN QYQ L +P S TY T SE SI FEVDGPY AMILPASKEEG  +KKRYAVFN+DG+
Sbjct:   574 FTNHQYQELTEPSSLTYVTRSENSIFFEVDGPYLAMILPASKEEGKKLKKRYAVFNEDGS 633

Query:   934 LAELKGFEIKRRGELKLIKVFQAELFDKFLHGSTIEECYSAVAAVANRWLDLL 986
             LAELKGFE+KRRGEL+LIK+FQ+ +F+ FL GST+EE Y++VA VA+ WLD+L
Sbjct:   634 LAELKGFEVKRRGELQLIKIFQSSVFEAFLKGSTLEEVYASVAKVADYWLDVL 686


>UNIPROTKB|I3L832 [details] [associations]
            symbol:POLE "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0006260 "DNA replication" evidence=IEA] [GO:0003887
            "DNA-directed DNA polymerase activity" evidence=IEA] [GO:0003676
            "nucleic acid binding" evidence=IEA] InterPro:IPR006133
            InterPro:IPR012337 Pfam:PF03104 GO:GO:0006260 GO:GO:0003676
            SUPFAM:SSF53098 GO:GO:0003887 GeneTree:ENSGT00390000010194
            Ensembl:ENSSSCT00000031704 Uniprot:I3L832
        Length = 270

 Score = 786 (281.7 bits), Expect = 1.0e-76, P = 1.0e-76
 Identities = 150/245 (61%), Positives = 181/245 (73%)

Query:   185 DFLDCIVDLREYDVPYHIRFAIDNDVRCGQWYDVSISSTG-PL-LEKRVDLLQRAEVHVC 242
             D LD IVD+REYDVPYHIR +ID  +    WY+V       P+ + +R DL++R +  V 
Sbjct:    24 DQLDNIVDMREYDVPYHIRLSIDLKIHVAHWYNVRYRGNAFPVEIARRDDLVERPDPVVL 83

Query:   243 AFDIETTKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYF 302
             AFDIETTKLPLKFPDA+ D IMMISYM+DGQGYLI NRE V EDIED E+TPKPE+EG F
Sbjct:    84 AFDIETTKLPLKFPDAETDQIMMISYMIDGQGYLITNREIVSEDIEDFEFTPKPEYEGPF 143

Query:   303 KVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCD 362
              V N  +E+ L++ WF H+QE KP I VTYNGD+FDWPF+E RAA HG  M +E+GFQ D
Sbjct:   144 CVFNEPDEVHLIQRWFEHVQETKPTIMVTYNGDFFDWPFVEARAAVHGLSMYQEIGFQKD 203

Query:   363 KNQGECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEK 422
              +QGE ++    H+DC  WVKRDSYLP GS  LKA  KAKLGYDP+E++PEDM R A E+
Sbjct:   204 -SQGEYKSSQCIHMDCLRWVKRDSYLPVGSHNLKAAAKAKLGYDPVELDPEDMCRMATEQ 262

Query:   423 PQMMA 427
             PQ  A
Sbjct:   263 PQARA 267


>UNIPROTKB|F5H5Q5 [details] [associations]
            symbol:POLE "DNA polymerase epsilon catalytic subunit A"
            species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0003887 "DNA-directed DNA polymerase activity"
            evidence=IEA] [GO:0006260 "DNA replication" evidence=IEA]
            InterPro:IPR006133 InterPro:IPR012337 Pfam:PF03104 GO:GO:0006260
            GO:GO:0001701 GO:GO:0003676 SUPFAM:SSF53098 EMBL:AC135586
            EMBL:AC136467 EMBL:AC127070 GO:GO:0003887 HGNC:HGNC:9177
            ChiTaRS:POLE EMBL:AC131212 IPI:IPI00940894
            ProteinModelPortal:F5H5Q5 SMR:F5H5Q5 Ensembl:ENST00000535934
            ArrayExpress:F5H5Q5 Bgee:F5H5Q5 Uniprot:F5H5Q5
        Length = 180

 Score = 645 (232.1 bits), Expect = 1.1e-61, P = 1.1e-61
 Identities = 122/181 (67%), Positives = 145/181 (80%)

Query:   353 MSEELGFQCDKNQGECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNP 412
             M +E+GFQ D +QGE +A    H+DC  WVKRDSYLP GS  LKA  KAKLGYDP+E++P
Sbjct:     1 MQQEIGFQKD-SQGEYKAPQCIHMDCLRWVKRDSYLPVGSHNLKAAAKAKLGYDPVELDP 59

Query:   413 EDMVRFAKEKPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLC 472
             EDM R A E+PQ +A+YSVSDAVATYYLYM YVHPFIF+L TIIPM PDEVLRKGSGTLC
Sbjct:    60 EDMCRMATEQPQTLATYSVSDAVATYYLYMKYVHPFIFALCTIIPMEPDEVLRKGSGTLC 119

Query:   473 EMLLMVQAYKANVICPNKHQSDPEKFYRN-HLLESETYIGGHVECLESGVFRSDLPTSFK 531
             E LLMVQA+ AN+I PNK + +  K   + H+L+SETY+GGHVE LESGVFRSD+P  F+
Sbjct:   120 EALLMVQAFHANIIFPNKQEQEFNKLTDDGHVLDSETYVGGHVEALESGVFRSDIPCRFR 179

Query:   532 L 532
             +
Sbjct:   180 M 180


>UNIPROTKB|B3KS74 [details] [associations]
            symbol:POLE "cDNA FLJ35684 fis, clone SPLEN2019169, highly
            similar to DNA polymerase epsilon, catalytic subunit A"
            species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IEA]
            [GO:0006260 "DNA replication" evidence=IEA] [GO:0008270 "zinc ion
            binding" evidence=IEA] [GO:0003887 "DNA-directed DNA polymerase
            activity" evidence=IEA] InterPro:IPR013697 Pfam:PF08490
            GO:GO:0005634 GO:GO:0006260 GO:GO:0008270 EMBL:AC135586
            EMBL:AC136467 EMBL:AC127070 GO:GO:0003887 UniGene:Hs.524871
            HGNC:HGNC:9177 ChiTaRS:POLE EMBL:AC131212 EMBL:AK093003
            IPI:IPI00797203 STRING:B3KS74 Ensembl:ENST00000434528
            UCSC:uc001ukq.1 HOGENOM:HOG000213445 HOVERGEN:HBG073647
            Uniprot:B3KS74
        Length = 496

 Score = 357 (130.7 bits), Expect = 5.2e-56, Sum P(2) = 5.2e-56
 Identities = 95/323 (29%), Positives = 159/323 (49%)

Query:  1682 DESLDDDSQVDIV-SSWNIAEYLPK--EIQDHFVLVVSEFMYIPWKHAQKLAASRASLQE 1738
             +E  ++ +  D++ ++WNI ++LP+    Q++F+++VS ++   + H  K    R++   
Sbjct:   174 EEEAEESNVEDLLENNWNILQFLPQAASCQNYFLMIVSAYIVAVY-HCMKDGLRRSA--P 230

Query:  1739 GSSCTPSITVAAAE-NFESH-IVQYVKGEIS---SYFTGKLLSIVRDAIHHMKKMNNDQH 1793
             GS  TP     A++ + E+   V  + G I+    Y   +L          ++K      
Sbjct:   231 GS--TPVRRRGASQLSQEAEGAVGALPGMITFSQDYVANELTQSFFTITQKIQKKVTGSR 288

Query:  1794 NSPGVMQ---TAANIHKV-DAP-LEFIKHVCAAFALDQNVQHDVLVMRKNLLKYVRVREF 1848
             NS  + +        H + + P LEFIK+VC   +LD N+ + V  + ++LL+ V V EF
Sbjct:   289 NSTELSEMFPVLPGSHLLLNNPALEFIKYVCKVLSLDTNITNQVNKLNRDLLRLVDVGEF 348

Query:  1849 APEAEFRDPCPSFILPNVICSYCNXXXXX-----XXXXXXXXXXQDWHCAMPQCGQPYDR 1903
             + EA+FRDPC S++LP VIC  CN                      W C+   C  PYD 
Sbjct:   349 SEEAQFRDPCRSYVLPEVICRSCNFCRDLDLCKDSSFSEDGAVLPQWLCS--NCQAPYDS 406

Query:  1904 EVMENALLQIVRQRERLYHLQDLVCIRCNQVKAAHLAEQCACAGSFRCKEDASDFRSKMQ 1963
               +E  L+++++++   + LQDLVC++C  VK   +   C+CAG F        F  ++ 
Sbjct:   407 SAIEMTLVEVLQKKLMAFTLQDLVCLKCRGVKETSMPVYCSCAGDFALTIHTQVFMEQIG 466

Query:  1964 IFLNIANRQGFQLLQECTSWILE 1986
             IF NIA   G   L E   W+L+
Sbjct:   467 IFRNIAQHYGMSYLLETLEWLLQ 489

 Score = 289 (106.8 bits), Expect = 5.2e-56, Sum P(2) = 5.2e-56
 Identities = 55/148 (37%), Positives = 90/148 (60%)

Query:  1546 VVKQLIQRCLTDAVTSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLL 1605
             ++K ++   + +     N++AD  + H YRWL SP S LHDP LHR LH +M+K+F  L+
Sbjct:     4 ILKSMVVGWVKEITQYHNIYADNQVMHFYRWLRSPSSLLHDPALHRTLHNMMKKLFLQLI 63

Query:  1606 AEFRKLGATIIFANFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHS 1665
             AEF++LG+++I+ANF+++I+ T K  +  A AY + +  ++ ++E F  + +     W  
Sbjct:    64 AEFKRLGSSVIYANFNRIILCTKKRRVEDAIAYVEYITSSIHSKETFHSLTISFSRCWEF 123

Query:  1666 LLFMDQYNYGGIPARADESLD---DDSQ 1690
             LL+MD  NYGGI  +    +     DSQ
Sbjct:   124 LLWMDPSNYGGIKGKVSSRIHCGLQDSQ 151


>UNIPROTKB|F5H7E4 [details] [associations]
            symbol:POLE "DNA polymerase epsilon catalytic subunit A"
            species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0003887 "DNA-directed DNA polymerase activity"
            evidence=IEA] [GO:0006260 "DNA replication" evidence=IEA]
            InterPro:IPR006133 InterPro:IPR012337 Pfam:PF03104 GO:GO:0006260
            GO:GO:0003676 SUPFAM:SSF53098 EMBL:AC135586 EMBL:AC136467
            EMBL:AC127070 GO:GO:0003887 HGNC:HGNC:9177 ChiTaRS:POLE
            EMBL:AC131212 IPI:IPI00744598 ProteinModelPortal:F5H7E4
            Ensembl:ENST00000537064 ArrayExpress:F5H7E4 Bgee:F5H7E4
            Uniprot:F5H7E4
        Length = 310

 Score = 563 (203.2 bits), Expect = 5.7e-53, P = 5.7e-53
 Identities = 115/273 (42%), Positives = 179/273 (65%)

Query:    17 QKLIRSA-EEELEAKLGYDLFSEGDKRLGWLLTFASSSLEDEDTRKVYSCIDLYFVSQDG 75
             ++L RS   ++++ + G++   E  ++ GWL+    + + DED R + S +D YF+  DG
Sbjct:    33 KRLERSQWTDKMDLRFGFERLKEPGEKTGWLINMHPTEILDEDKR-LGSAVDYYFIQDDG 91

Query:    76 STFKSKYKFRPYFYAATKEKMEMDVEAYLRRRYESQIADIEILEKEDLDLKNHLSGLHKS 135
             S FK    ++PYFY AT++  E +V ++L ++++ +IA +E + KEDLDL NHL GL ++
Sbjct:    92 SRFKVALPYKPYFYIATRKGCEREVSSFLSKKFQGKIAKVETVPKEDLDLPNHLVGLKRN 151

Query:   136 YLKISFDTVQQLMDVKKDLLHVVERNQAKFDAAEAYESIL----------TGKRE--QRP 183
             Y+++SF TV+ L+ V+K++   V++N+ +  A++AY ++L          T + E  ++ 
Sbjct:   152 YIRLSFHTVEDLVKVRKEISPAVKKNREQDHASDAYTALLSSVLQRGGVITDEEETSKKI 211

Query:   184 QDFLDCIVDLREYDVPYHIRFAIDNDVRCGQWYDVSISSTG-PL-LEKRVDLLQRAEVHV 241
              D LD IVD+REYDVPYHIR +ID  +    WY+V       P+ + +R DL++R +  V
Sbjct:   212 ADQLDNIVDMREYDVPYHIRLSIDLKIHVAHWYNVRYRGNAFPVEITRRDDLVERPDPVV 271

Query:   242 CAFDIETTKLPLKFPDADYDIIMMISYMLDGQG 274
              AFDIETTKLPLKFPDA+ D IMMISYM+DGQG
Sbjct:   272 LAFDIETTKLPLKFPDAETDQIMMISYMIDGQG 304


>UNIPROTKB|F1LTB3 [details] [associations]
            symbol:Pole "Protein Pole" species:10116 "Rattus
            norvegicus" [GO:0003887 "DNA-directed DNA polymerase activity"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006260 "DNA
            replication" evidence=IEA] [GO:0008270 "zinc ion binding"
            evidence=IEA] InterPro:IPR013697 Pfam:PF08490 RGD:1594540
            GO:GO:0005634 GO:GO:0006260 GO:GO:0008270 GO:GO:0003887
            IPI:IPI00952261 Ensembl:ENSRNOT00000065577 ArrayExpress:F1LTB3
            Uniprot:F1LTB3
        Length = 409

 Score = 365 (133.5 bits), Expect = 2.7e-36, Sum P(2) = 2.7e-36
 Identities = 98/327 (29%), Positives = 165/327 (50%)

Query:  1682 DESLDDD---SQVD--IVSSWNIAEYLPK--EIQDHFVLVVSEFM---YIPWKHAQKLAA 1731
             DE  ++D   S+V+  + ++WNI ++LP+    Q +F+++VS ++   Y   K   + +A
Sbjct:    83 DEEEEEDMGQSEVEDLLENNWNILQFLPQAASCQSYFLMIVSAYIVAVYQSMKDELRHSA 142

Query:  1732 --SRASLQEGSSCTPSITVAAAENFESHIVQYVKGEISSYFTGKLLSIVRDAIHHMKKMN 1789
               S    ++G+S        AA      ++ + +  +++  T    +I +      KK+ 
Sbjct:   143 PGSTPVKRKGASQFSQEAEGAAGALPG-MITFSQDYVANELTQTFFTITQKI---QKKVT 198

Query:  1790 NDQHNS-PGVM-QTAANIHKV-DAP-LEFIKHVCAAFALDQNVQHDVLVMRKNLLKYVRV 1845
               ++ + P  M       H + + P LEFIK+VC   +LD N+ + V  + ++LL+ V V
Sbjct:   199 GSRNTAEPSEMFPVLPGSHLLLNNPALEFIKYVCKVLSLDTNITNQVNKLNRDLLRLVDV 258

Query:  1846 REFAPEAEFRDPCPSFILPNVICSYCNXXXXXXXXXXXXXXXQD------WHCAMPQCGQ 1899
              EF+ EA+FRDPC S++LP VIC  CN               QD      W C+   C  
Sbjct:   259 GEFSEEAQFRDPCHSYVLPEVICHSCNFCRDLDLCKDSSFS-QDGAILPQWLCS--NCQA 315

Query:  1900 PYDREVMENALLQIVRQRERLYHLQDLVCIRCNQVKAAHLAEQCACAGSFRCKEDASDFR 1959
             PYD   +E+AL++ ++++   + LQDLVC++C  +K  H+   C CAG F        F 
Sbjct:   316 PYDSSAIESALVEALQRKLMAFTLQDLVCLKCRGMKETHMPVYCGCAGDFVLTIHTEVFM 375

Query:  1960 SKMQIFLNIANRQGFQLLQECTSWILE 1986
              +++IF NIA       LQE   W+L+
Sbjct:   376 EQIRIFQNIAKYYNMSYLQEAIEWLLQ 402

 Score = 73 (30.8 bits), Expect = 2.7e-36, Sum P(2) = 2.7e-36
 Identities = 16/49 (32%), Positives = 26/49 (53%)

Query:  1639 CDSLLKA--LQTRELFEWIELEPVHFWHSLLFMDQYNYGGIPARADESL 1685
             C + LK   + ++E+F  + +     W  LL+MD  NYGGI  +   S+
Sbjct:    10 CVNPLKVHFIHSKEIFHSLTISFSRCWEFLLWMDPSNYGGIKGKVPSSI 58


>RGD|1594540 [details] [associations]
            symbol:Pole "polymerase (DNA directed), epsilon, catalytic
            subunit" species:10116 "Rattus norvegicus" [GO:0000082 "G1/S
            transition of mitotic cell cycle" evidence=ISO] [GO:0000731 "DNA
            synthesis involved in DNA repair" evidence=ISO] [GO:0001701 "in
            utero embryonic development" evidence=IEP] [GO:0003674
            "molecular_function" evidence=ND] [GO:0003677 "DNA binding"
            evidence=ISO] [GO:0003682 "chromatin binding" evidence=ISO]
            [GO:0003887 "DNA-directed DNA polymerase activity" evidence=ISO]
            [GO:0005575 "cellular_component" evidence=ND] [GO:0005634 "nucleus"
            evidence=ISO] [GO:0006260 "DNA replication" evidence=ISO]
            [GO:0006287 "base-excision repair, gap-filling" evidence=ISO]
            [GO:0006297 "nucleotide-excision repair, DNA gap filling"
            evidence=ISO] [GO:0008622 "epsilon DNA polymerase complex"
            evidence=ISO] RGD:1594540 GO:GO:0001701 IPI:IPI00780337
            PRIDE:F1LY20 Ensembl:ENSRNOT00000056682 UCSC:RGD:1594540
            ArrayExpress:F1LY20 Uniprot:F1LY20
        Length = 319

 Score = 331 (121.6 bits), Expect = 6.2e-29, Sum P(2) = 6.2e-29
 Identities = 68/181 (37%), Positives = 99/181 (54%)

Query:  1812 LEFIKHVCAAFALDQNVQHDVLVMRKNLLKYVRVREFAPEAEFRDPCPSFILPNVICSYC 1871
             LEFIK+VC   +LD N+ + V  + ++LL+ V V EF+ EA+FRDPC S++LP VIC  C
Sbjct:   135 LEFIKYVCKVLSLDTNITNQVNKLNRDLLRLVDVGEFSEEAQFRDPCHSYVLPEVICHSC 194

Query:  1872 NXXXXXXXXXXXXXXXQD------WHCAMPQCGQPYDREVMENALLQIVRQRERLYHLQD 1925
             N               QD      W C+   C  PYD   +E+AL++ ++++   + LQD
Sbjct:   195 NFCRDLDLCKDSSFS-QDGAILPQWLCS--NCQAPYDSSAIESALVEALQRKLMAFTLQD 251

Query:  1926 LVCIRCNQVKAAHLAEQCACAGSFRCKEDASDFRSKMQIFLNIANRQGFQLLQECTSWIL 1985
             LVC++C  +K  H+   C CAG F        F  +++IF NIA       LQE   W+L
Sbjct:   252 LVCLKCRGMKETHMPVYCGCAGDFVLTIHTEVFMEQIRIFQNIAKYYNMSYLQEAIEWLL 311

Query:  1986 E 1986
             +
Sbjct:   312 Q 312

 Score = 37 (18.1 bits), Expect = 6.2e-29, Sum P(2) = 6.2e-29
 Identities = 11/39 (28%), Positives = 17/39 (43%)

Query:  1210 TVKTTDQVDSLRQQLEPSEVSDQQPSSQNAIDTENIDRI 1248
             T K   +V   R   EPSE+    P S   ++   ++ I
Sbjct:   100 TQKIQKKVTGSRNTAEPSEMFPVLPGSHLLLNNPALEFI 138


>UNIPROTKB|Q8TSB3 [details] [associations]
            symbol:MA_0885 "DNA polymerase" species:188937
            "Methanosarcina acetivorans C2A" [GO:0003887 "DNA-directed DNA
            polymerase activity" evidence=IBA] [GO:0005694 "chromosome"
            evidence=IBA] [GO:0006297 "nucleotide-excision repair, DNA gap
            filling" evidence=IBA] [GO:0008408 "3'-5' exonuclease activity"
            evidence=IBA] [GO:0019985 "translesion synthesis" evidence=IBA]
            InterPro:IPR006133 InterPro:IPR006134 InterPro:IPR006172
            InterPro:IPR012337 InterPro:IPR017964 Pfam:PF00136 Pfam:PF03104
            PRINTS:PR00106 PROSITE:PS00116 SMART:SM00486 GO:GO:0005694
            GO:GO:0000166 GO:GO:0003677 GO:GO:0006260 SUPFAM:SSF53098
            GO:GO:0008408 GO:GO:0003887 GO:GO:0006297 EMBL:AE010299
            GenomeReviews:AE010299_GR eggNOG:COG0417 GO:GO:0019985
            Gene3D:3.90.1600.10 InterPro:IPR023211 OMA:RSFRPYF HSSP:Q56366
            KO:K02319 RefSeq:NP_615844.1 ProteinModelPortal:Q8TSB3
            GeneID:1472777 KEGG:mac:MA0885 ProtClustDB:CLSK568782
            BioCyc:MACE188937:GI2O-954-MONOMER Uniprot:Q8TSB3
        Length = 937

 Score = 133 (51.9 bits), Expect = 1.2e-11, Sum P(3) = 1.2e-11
 Identities = 99/427 (23%), Positives = 175/427 (40%)

Query:    84 FRPYFYAATKEKMEMDVEAYLRRRYESQIADIEILEK-EDLDLKNHLSGLHKSYLKISFD 142
             F PYFY      +   V   ++  +E Q+  +EI+EK E +  +       K  L+++  
Sbjct:    41 FEPYFYLKASGDLHA-VARLIKDTFE-QVKKVEIVEKFEPVGYQK----TKKEMLRVTTR 94

Query:   143 TVQQLMDVKKDLLHVVERNQAKFDAAEAYESILTGKREQRPQDFLDCIVDLREYDVPYH- 201
               + + +++ ++L + +  +A+ D  + YES +  +        L  +V +     P   
Sbjct:    95 LPKDVPEIRDEILKIRDVLRAEGDW-QVYESDILFRNRFLIDRALGGMVWVSAEGKPVDP 153

Query:   202 IRFAIDNDV---RCGQWY-DVSISSTGPLLEKRVDLLQRAEVHVCAFDIETTKLPLKFPD 257
             +R+         RC  +  D ++ ++G    KRV+ L  A +   AFDIE   L    P 
Sbjct:   154 VRYLGAGSAWRSRCENFACDSAVLASGL---KRVENLAIAPLKYLAFDIECLPLDGGMPS 210

Query:   258 ADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNVNNEIELLRLW 317
              D   I+MIS+  +         E  G     L   P    +G   V +  +E E+L  +
Sbjct:   211 PDVSPIIMISFSFEP--------EYKGHKTLILLAKPAAGMDG--DVLSCMDETEMLNKF 260

Query:   318 FAHMQEVKPGIYVTYNGDYFDWPFLETRA---AHHGFKMSEELGFQCD----KNQG---E 367
             F  + E  P I   YN   FD P++  R       G  ++  +G        +  G    
Sbjct:   261 FEIICEYDPDIVAGYNHQDFDIPYITERVKALVAKGETINSVVGRDGSPIGYRKFGLITR 320

Query:   368 CRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRF---AKEKPQ 424
                K    +D    V+R   L Q +  L+AV+K  L  + L+V P +M      + +K +
Sbjct:   321 TEMKGRVVVDALPLVRRAFSLKQYT--LRAVSKELLSREKLDVPPLEMEEHWNDSGDKFR 378

Query:   425 MMASYSVSDA--VATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQ-AY 481
                 Y+  D+       L +  +  +I +LA +      E++  G  ++ E LL+ +   
Sbjct:   379 KFVDYARRDSELALELVLELRLLDKYI-ALAQVSGSLLQEIVDGGQTSMVETLLLREFGL 437

Query:   482 KANVICP 488
             K  VI P
Sbjct:   438 KDRVILP 444

 Score = 132 (51.5 bits), Expect = 1.2e-11, Sum P(3) = 1.2e-11
 Identities = 71/313 (22%), Positives = 131/313 (41%)

Query:   772 DSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIE-KIGKPLELD 830
             D+ QLA K +LNSFYGY     AR YS+ +A  VT  G   I N R LI  +IGK +  +
Sbjct:   560 DATQLAIKILLNSFYGYSGYARARLYSLTLANAVTSFGRSNILNTRDLINGRIGKIVLRN 619

Query:   831 TDGIWCVLPGSFPENXXXXXXXXXXXXXISYPCVMLNVDVARNNTNDQYQTLVDPVSKTY 890
             +  +     G                   S   V ++     + + ++   + + +S+  
Sbjct:   620 SAALLLEEAGKLSPQDRIVELSVAYGDTDS---VFVHCKAKGDLSLEEVSLVGNRLSEIV 676

Query:   891 ETHSECSIEFEVDGPYKAMILPASKEEGI-LIKKRYAVFNDDGTLAELKGFEIKRRGELK 949
                    +E E +   K  +L A K   + L + R + + +     ++KG E  RR   +
Sbjct:   677 SASLPDPMELEFESVAKRALLIAKKRYALWLFEPRNSGWENK---IKVKGMETVRRDWCE 733

Query:   950 LIKVFQAELFDKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMS 1009
             L  +    + +  L    +++    V  V +   +L  + GKD     +I+ +  + T++
Sbjct:   734 LTSITLNRVLEFVLIEGDVDKAVEHVRKVVSDVRNL--DPGKDAG---IIEKLVLTRTLT 788

Query:  1010 KSLADYGEQKSCAVTTARRLSDFLGDTMVKDKGLRCQYIVACEPQGTPVSERAVPVAIFE 1069
             +  AD  + K   +T A  L    G  ++   G R  +++    +G  V     P  + E
Sbjct:   789 RK-ADSYKNKQPHLTVAENLKKRTG--IMPSIGTRIPFVITAG-KGLFVDRAEDPDYVRE 844

Query:  1070 TDAEI-MKFYLRK 1081
              +  I + +Y++K
Sbjct:   845 NNVPIDVDYYVKK 857

 Score = 43 (20.2 bits), Expect = 1.2e-11, Sum P(3) = 1.2e-11
 Identities = 8/23 (34%), Positives = 15/23 (65%)

Query:   595 LDVAAMYPNIILTNRLQPPSIVT 617
             LD  ++YP I++ + L   ++VT
Sbjct:   480 LDYKSLYPTIMMAHNLCYTTVVT 502


>UNIPROTKB|Q9KSP4 [details] [associations]
            symbol:VC_1212 "DNA polymerase" species:243277 "Vibrio
            cholerae O1 biovar El Tor str. N16961" [GO:0003887 "DNA-directed
            DNA polymerase activity" evidence=ISS] [GO:0006260 "DNA
            replication" evidence=ISS] InterPro:IPR006133 InterPro:IPR006134
            InterPro:IPR006172 InterPro:IPR012337 InterPro:IPR017964
            Pfam:PF00136 Pfam:PF03104 PRINTS:PR00106 PROSITE:PS00116
            SMART:SM00486 GO:GO:0000166 GO:GO:0003677 GO:GO:0006260
            EMBL:AE003852 GenomeReviews:AE003852_GR SUPFAM:SSF53098
            GO:GO:0003887 KO:K02336 OMA:VLDGIDW ProtClustDB:PRK05762
            Gene3D:3.90.1600.10 InterPro:IPR023211 HSSP:P21189 PIR:E82227
            RefSeq:NP_230857.1 ProteinModelPortal:Q9KSP4 DNASU:2614645
            GeneID:2614645 KEGG:vch:VC1212 PATRIC:20081512 Uniprot:Q9KSP4
        Length = 787

 Score = 96 (38.9 bits), Expect = 1.3e-07, Sum P(4) = 1.3e-07
 Identities = 23/69 (33%), Positives = 37/69 (53%)

Query:   777 AHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIG-KPLELDTDGIW 835
             A K I+NSFYG +   G R++   +A  +T  G +I+   + LIE  G + +  DTD  +
Sbjct:   494 AIKIIMNSFYGVLGSSGCRFFDARLASSITMRGHEIMIQTKRLIEARGYQVIYGDTDSTF 553

Query:   836 CVLPGSFPE 844
               L G + +
Sbjct:   554 VALGGQYSQ 562

 Score = 92 (37.4 bits), Expect = 1.3e-07, Sum P(4) = 1.3e-07
 Identities = 58/249 (23%), Positives = 101/249 (40%)

Query:   307 VNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMS----EELGF--- 359
             V +E +LL+   A  ++  P + + ++   FD+  L  RA  H  K++    ++  F   
Sbjct:   199 VEDEYQLLKALIAWFEQFDPDVIIGWSVVDFDFRLLHKRAEFHKLKLTIGRAQQPSFFRT 258

Query:   360 QCDKNQGECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMV--- 416
                  QG         LD    +K  +Y  + S  L++V++  LG      N  D +   
Sbjct:   259 ASQTQQGFISIPGRVVLDGIDTLKTATYHFR-SWSLESVSQELLGEGKAIHNVHDRMDEI 317

Query:   417 --RFAKEKPQMMASYSVSDAVATYYLYM-TYVHPFIFSLATIIPMSPDEVLRKGSGTLCE 473
                F  +KP + A Y++ D V    ++  T++  F    + +  +  D +   GS     
Sbjct:   318 NQMFRHDKPSL-ARYNLQDCVLVNKIFAATHLLDFAIQRSRLTGVELDRI--GGSVAAFT 374

Query:   474 MLLMVQAYKANVICPNKHQSDPEKFYRNHLLESETYIGGHVECLESGVFRSDLPTSFK-L 532
              L + Q ++A  + PN     PE +  +         GG+V     G++ S L   FK L
Sbjct:   375 NLYLPQLHRAGYVAPNLQ---PENWVASP--------GGYVMDSIPGLYDSVLVLDFKSL 423

Query:   533 DPSAYEQLL 541
              PS     L
Sbjct:   424 YPSIIRSFL 432

 Score = 85 (35.0 bits), Expect = 1.3e-07, Sum P(4) = 1.3e-07
 Identities = 28/95 (29%), Positives = 42/95 (44%)

Query:   898 IEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAEL--KGFEIKRRGELKLIKVFQ 955
             +E E +  Y+  ++P  +      KKRYA    DG   +L  KG E  R     L + FQ
Sbjct:   594 LELEYETHYRRFLMPTIRGSETGSKKRYAGLKGDGDNEQLIFKGLESARTDWTPLAQRFQ 653

Query:   956 AELFDKFLHGSTIEECYSAVAAVANRWL-DLLDNQ 989
              +L+    HG   E   S +  +  + L   LD+Q
Sbjct:   654 HQLYQLIFHGQDPE---SYIRTIVEQTLAGQLDDQ 685

 Score = 39 (18.8 bits), Expect = 1.3e-07, Sum P(4) = 1.3e-07
 Identities = 7/22 (31%), Positives = 14/22 (63%)

Query:   595 LDVAAMYPNIILTNRLQPPSIV 616
             LD  ++YP+II +  + P  ++
Sbjct:   418 LDFKSLYPSIIRSFLIDPLGLI 439


>TIGR_CMR|VC_1212 [details] [associations]
            symbol:VC_1212 "DNA polymerase II" species:686 "Vibrio
            cholerae O1 biovar El Tor" [GO:0003887 "DNA-directed DNA polymerase
            activity" evidence=ISS] [GO:0006260 "DNA replication" evidence=ISS]
            InterPro:IPR006133 InterPro:IPR006134 InterPro:IPR006172
            InterPro:IPR012337 InterPro:IPR017964 Pfam:PF00136 Pfam:PF03104
            PRINTS:PR00106 PROSITE:PS00116 SMART:SM00486 GO:GO:0000166
            GO:GO:0003677 GO:GO:0006260 EMBL:AE003852 GenomeReviews:AE003852_GR
            SUPFAM:SSF53098 GO:GO:0003887 KO:K02336 OMA:VLDGIDW
            ProtClustDB:PRK05762 Gene3D:3.90.1600.10 InterPro:IPR023211
            HSSP:P21189 PIR:E82227 RefSeq:NP_230857.1 ProteinModelPortal:Q9KSP4
            DNASU:2614645 GeneID:2614645 KEGG:vch:VC1212 PATRIC:20081512
            Uniprot:Q9KSP4
        Length = 787

 Score = 96 (38.9 bits), Expect = 1.3e-07, Sum P(4) = 1.3e-07
 Identities = 23/69 (33%), Positives = 37/69 (53%)

Query:   777 AHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIG-KPLELDTDGIW 835
             A K I+NSFYG +   G R++   +A  +T  G +I+   + LIE  G + +  DTD  +
Sbjct:   494 AIKIIMNSFYGVLGSSGCRFFDARLASSITMRGHEIMIQTKRLIEARGYQVIYGDTDSTF 553

Query:   836 CVLPGSFPE 844
               L G + +
Sbjct:   554 VALGGQYSQ 562

 Score = 92 (37.4 bits), Expect = 1.3e-07, Sum P(4) = 1.3e-07
 Identities = 58/249 (23%), Positives = 101/249 (40%)

Query:   307 VNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMS----EELGF--- 359
             V +E +LL+   A  ++  P + + ++   FD+  L  RA  H  K++    ++  F   
Sbjct:   199 VEDEYQLLKALIAWFEQFDPDVIIGWSVVDFDFRLLHKRAEFHKLKLTIGRAQQPSFFRT 258

Query:   360 QCDKNQGECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMV--- 416
                  QG         LD    +K  +Y  + S  L++V++  LG      N  D +   
Sbjct:   259 ASQTQQGFISIPGRVVLDGIDTLKTATYHFR-SWSLESVSQELLGEGKAIHNVHDRMDEI 317

Query:   417 --RFAKEKPQMMASYSVSDAVATYYLYM-TYVHPFIFSLATIIPMSPDEVLRKGSGTLCE 473
                F  +KP + A Y++ D V    ++  T++  F    + +  +  D +   GS     
Sbjct:   318 NQMFRHDKPSL-ARYNLQDCVLVNKIFAATHLLDFAIQRSRLTGVELDRI--GGSVAAFT 374

Query:   474 MLLMVQAYKANVICPNKHQSDPEKFYRNHLLESETYIGGHVECLESGVFRSDLPTSFK-L 532
              L + Q ++A  + PN     PE +  +         GG+V     G++ S L   FK L
Sbjct:   375 NLYLPQLHRAGYVAPNLQ---PENWVASP--------GGYVMDSIPGLYDSVLVLDFKSL 423

Query:   533 DPSAYEQLL 541
              PS     L
Sbjct:   424 YPSIIRSFL 432

 Score = 85 (35.0 bits), Expect = 1.3e-07, Sum P(4) = 1.3e-07
 Identities = 28/95 (29%), Positives = 42/95 (44%)

Query:   898 IEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAEL--KGFEIKRRGELKLIKVFQ 955
             +E E +  Y+  ++P  +      KKRYA    DG   +L  KG E  R     L + FQ
Sbjct:   594 LELEYETHYRRFLMPTIRGSETGSKKRYAGLKGDGDNEQLIFKGLESARTDWTPLAQRFQ 653

Query:   956 AELFDKFLHGSTIEECYSAVAAVANRWL-DLLDNQ 989
              +L+    HG   E   S +  +  + L   LD+Q
Sbjct:   654 HQLYQLIFHGQDPE---SYIRTIVEQTLAGQLDDQ 685

 Score = 39 (18.8 bits), Expect = 1.3e-07, Sum P(4) = 1.3e-07
 Identities = 7/22 (31%), Positives = 14/22 (63%)

Query:   595 LDVAAMYPNIILTNRLQPPSIV 616
             LD  ++YP+II +  + P  ++
Sbjct:   418 LDFKSLYPSIIRSFLIDPLGLI 439


>UNIPROTKB|P21189 [details] [associations]
            symbol:polB "DNA polymerase II" species:83333 "Escherichia
            coli K-12" [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0019985
            "translesion synthesis" evidence=IBA] [GO:0008408 "3'-5'
            exonuclease activity" evidence=IBA] [GO:0006297
            "nucleotide-excision repair, DNA gap filling" evidence=IBA]
            [GO:0005694 "chromosome" evidence=IBA] [GO:0003677 "DNA binding"
            evidence=IEA] [GO:0045004 "DNA replication proofreading"
            evidence=IDA] [GO:0009432 "SOS response" evidence=IEA;IEP]
            [GO:0006261 "DNA-dependent DNA replication" evidence=IMP]
            [GO:0008296 "3'-5'-exodeoxyribonuclease activity" evidence=IDA]
            [GO:0003887 "DNA-directed DNA polymerase activity"
            evidence=IEA;IDA;IBA] InterPro:IPR006133 InterPro:IPR006134
            InterPro:IPR006172 InterPro:IPR012337 InterPro:IPR017964
            Pfam:PF00136 Pfam:PF03104 PRINTS:PR00106 PROSITE:PS00116
            SMART:SM00486 GO:GO:0005694 GO:GO:0000166 EMBL:U00096 EMBL:AP009048
            GenomeReviews:AP009048_GR GenomeReviews:U00096_GR GO:GO:0003677
            SUPFAM:SSF53098 EMBL:M35371 EMBL:M62646 EMBL:M37727 EMBL:M38283
            GO:GO:0009432 GO:GO:0003887 GO:GO:0006297 EMBL:X54847 PIR:S15943
            RefSeq:NP_414602.1 RefSeq:YP_488366.1 PDB:1Q8I PDB:3K57 PDB:3K58
            PDB:3K59 PDB:3K5L PDB:3K5M PDB:3K5N PDB:3K5O PDB:3MAQ PDBsum:1Q8I
            PDBsum:3K57 PDBsum:3K58 PDBsum:3K59 PDBsum:3K5L PDBsum:3K5M
            PDBsum:3K5N PDBsum:3K5O PDBsum:3MAQ ProteinModelPortal:P21189
            SMR:P21189 IntAct:P21189 PRIDE:P21189
            EnsemblBacteria:EBESCT00000004906 EnsemblBacteria:EBESCT00000016904
            GeneID:12932627 GeneID:944779 KEGG:ecj:Y75_p0060 KEGG:eco:b0060
            PATRIC:32115221 EchoBASE:EB0740 EcoGene:EG10747 eggNOG:COG0417
            HOGENOM:HOG000221829 KO:K02336 OMA:VLDGIDW ProtClustDB:PRK05762
            BioCyc:EcoCyc:EG10747-MONOMER BioCyc:ECOL316407:JW0059-MONOMER
            BioCyc:MetaCyc:EG10747-MONOMER EvolutionaryTrace:P21189
            Genevestigator:P21189 GO:GO:0008296 GO:GO:0045004 GO:GO:0019985
            Gene3D:3.90.1600.10 InterPro:IPR023211 Uniprot:P21189
        Length = 783

 Score = 108 (43.1 bits), Expect = 4.2e-07, Sum P(4) = 4.2e-07
 Identities = 56/239 (23%), Positives = 101/239 (42%)

Query:   311 IELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKM-----SEELGFQCD--K 363
             +E L  WFA+     P + + +N   FD   L+  A  +   +     + EL ++    K
Sbjct:   205 LEKLNAWFANYD---PDVIIGWNVVQFDLRMLQKHAERYRLPLRLGRDNSELEWREHGFK 261

Query:   364 NQGE--CRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMV----- 416
             N G    +AK    +D    +K  ++    S  L+ V +  LG      NP D +     
Sbjct:   262 N-GVFFAQAKGRLIIDGIEALK-SAFWNFSSFSLETVAQELLGEGKSIDNPWDRMDEIDR 319

Query:   417 RFAKEKPQMMASYSVSDA-VATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEML 475
             RFA++KP + A+Y++ D  + T   + T + PF+   AT+  +  D     GS      L
Sbjct:   320 RFAEDKPAL-ATYNLKDCELVTQIFHKTEIMPFLLERATVNGLPVDR--HGGSVAAFGHL 376

Query:   476 LMVQAYKANVICPNKHQSDPEKFYRNHLLESETYIGGHVECLESGVFRSDLPTSFKLDP 534
                + ++A  + PN  +  P      ++++S   +   V  L+       +  +F +DP
Sbjct:   377 YFPRMHRAGYVAPNLGEVPPHASPGGYVMDSRPGLYDSVLVLDYKSLYPSIIRTFLIDP 435

 Score = 91 (37.1 bits), Expect = 4.2e-07, Sum P(4) = 4.2e-07
 Identities = 30/105 (28%), Positives = 47/105 (44%)

Query:   741 LNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHKCILNSFYGYVMRKGARWYSME 800
             +  +W G+  EAK  GN                L  A K I+N+FYG +     R++   
Sbjct:   470 VTNIWHGR-DEAKRQGNK--------------PLSQALKIIMNAFYGVLGTTACRFFDPR 514

Query:   801 MAGVVTYTGAKIIQNARLLIEKIGKPLEL-DTDGIWCVLPGSFPE 844
             +A  +T  G +I++  + LIE  G  +   DTD  +  L G+  E
Sbjct:   515 LASSITMRGHQIMRQTKALIEAQGYDVIYGDTDSTFVWLKGAHSE 559

 Score = 62 (26.9 bits), Expect = 4.2e-07, Sum P(4) = 4.2e-07
 Identities = 19/76 (25%), Positives = 32/76 (42%)

Query:   897 SIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAEL--KGFEIKRRGELKLIKVF 954
             ++E E +  +   ++P  +      KKRYA    +G    +  KG E  R     L + F
Sbjct:   589 ALELEYETHFCRFLMPTIRGADTGSKKRYAGLIQEGDKQRMVFKGLETVRTDWTPLAQQF 648

Query:   955 QAELFDKFLHGSTIEE 970
             Q EL+ +       +E
Sbjct:   649 QQELYLRIFRNEPYQE 664

 Score = 45 (20.9 bits), Expect = 4.2e-07, Sum P(4) = 4.2e-07
 Identities = 9/22 (40%), Positives = 14/22 (63%)

Query:   595 LDVAAMYPNIILTNRLQPPSIV 616
             LD  ++YP+II T  + P  +V
Sbjct:   418 LDYKSLYPSIIRTFLIDPVGLV 439


>FB|FBgn0263600 [details] [associations]
            symbol:DNApol-delta "DNA-polymerase-delta" species:7227
            "Drosophila melanogaster" [GO:0003887 "DNA-directed DNA polymerase
            activity" evidence=ISS;NAS;IDA] [GO:0043625 "delta DNA polymerase
            complex" evidence=ISS;IDA] [GO:0008296 "3'-5'-exodeoxyribonuclease
            activity" evidence=IDA] [GO:0006273 "lagging strand elongation"
            evidence=NAS] [GO:0006272 "leading strand elongation" evidence=NAS]
            [GO:0008310 "single-stranded DNA specific 3'-5'
            exodeoxyribonuclease activity" evidence=NAS] [GO:0006260 "DNA
            replication" evidence=IEA] [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005875
            "microtubule associated complex" evidence=IDA] [GO:0006974
            "response to DNA damage stimulus" evidence=IMP] [GO:0022008
            "neurogenesis" evidence=IMP] InterPro:IPR004578 InterPro:IPR006133
            InterPro:IPR006134 InterPro:IPR006172 InterPro:IPR012337
            InterPro:IPR017964 Pfam:PF00136 Pfam:PF03104 PRINTS:PR00106
            PROSITE:PS00116 SMART:SM00486 GO:GO:0005875 EMBL:AE014296
            GO:GO:0022008 GO:GO:0000166 GO:GO:0046872 GO:GO:0003677
            GO:GO:0006260 GO:GO:0006974 GO:GO:0051539 SUPFAM:SSF53098
            GO:GO:0003887 eggNOG:COG0417 GO:GO:0008296 Gene3D:3.90.1600.10
            InterPro:IPR023211 TIGRFAMs:TIGR00592 KO:K02327 InterPro:IPR025687
            Pfam:PF14260 GeneTree:ENSGT00560000077365 GO:GO:0043625 EMBL:X88928
            EMBL:AY113526 RefSeq:NP_524099.2 UniGene:Dm.2838
            ProteinModelPortal:P54358 SMR:P54358 DIP:DIP-22360N IntAct:P54358
            MINT:MINT-877114 STRING:P54358 PaxDb:P54358
            EnsemblMetazoa:FBtr0075522 GeneID:39746 KEGG:dme:Dmel_CG5949
            CTD:39746 FlyBase:FBgn0263600 InParanoid:P54358 OMA:RSFRPYF
            OrthoDB:EOG4RFJ7F PhylomeDB:P54358 GenomeRNAi:39746 NextBio:815171
            Bgee:P54358 GermOnline:CG5949 Uniprot:P54358
        Length = 1092

 Score = 119 (46.9 bits), Expect = 6.7e-07, Sum P(4) = 6.7e-07
 Identities = 72/296 (24%), Positives = 126/296 (42%)

Query:    69 YFVSQDGSTFKSKYKFRPYFYAATKEKMEMDVEAYLRRRYESQIADIEILEKEDLDLKNH 128
             YF  +  S F+  +  +     A  +K+  D+    +   +  +  +E++EK  L++  +
Sbjct:   127 YFYIEAPSQFEEHHCEK--LQKALDQKVIADIRNN-KDNVQEAVLMVELVEK--LNIHGY 181

Query:   129 LSGLHKSYLKISFDTVQQLMDVKKDLLHVVERNQAKFDAAEAYESILTGK-REQRPQDFL 187
                  + Y+KIS    + +    + L   V  ++  F    A+E+ +    R     D +
Sbjct:   182 NGDKKQRYIKISVTLPRFVAAASRLLKKEVIMSEIDFQDCRAFENNIDFDIRFMVDTDVV 241

Query:   188 DCI-VDLREYDVPYHIRFAIDNDV---RCGQWYDVSISSTGPLLEKRVDLLQRAEVHVCA 243
              C  ++L      + IR +    +   RC    DV+        E   +  + A   + +
Sbjct:   242 GCNWIELPMGH--WRIRNSHSKPLPESRCQIEVDVAFDRFISH-EPEGEWSKVAPFRILS 298

Query:   244 FDIETTKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDL-EYTPKPEFEGYF 302
             FDIE       FP+A  D ++ I+ M+  QG     RE    ++  L E  P     G  
Sbjct:   299 FDIECAGRKGIFPEAKIDPVIQIANMVIRQG----EREPFIRNVFTLNECAP---IIGS- 350

Query:   303 KVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELG 358
             +V   + E ++L  W A ++EV P I   YN + FD+P+L  RAAH   +  E LG
Sbjct:   351 QVLCHDKETQMLDKWSAFVREVDPDILTGYNINNFDFPYLLNRAAHLKVRNFEYLG 406

 Score = 75 (31.5 bits), Expect = 6.7e-07, Sum P(4) = 6.7e-07
 Identities = 21/81 (25%), Positives = 40/81 (49%)

Query:   741 LNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHKCILNSFYGYVMRKGARWYSME 800
             L ++ +  L+  K + N +K++       + D  QLA K   NS YG+   +  +   +E
Sbjct:   645 LPEILESLLAARKRAKNDLKVETDPFKRKVLDGRQLALKISANSVYGFTGAQVGKLPCLE 704

Query:   801 MAGVVTYTGAKIIQNARLLIE 821
             ++G VT  G  +I+  +  +E
Sbjct:   705 ISGSVTAYGRTMIEMTKNEVE 725

 Score = 73 (30.8 bits), Expect = 6.7e-07, Sum P(4) = 6.7e-07
 Identities = 50/170 (29%), Positives = 75/170 (44%)

Query:   919 ILIKKRYA--VFNDDGTLAEL--KGFEIKRRGELKLIKVFQAELFDKFLHGSTIE-ECYS 973
             ++ KKRYA   F    T  ++  KG E  RR    L+    A L +  L    IE +   
Sbjct:   792 LINKKRYAGLYFTRPDTYDKMDCKGIETVRRDNSPLV----ANLMNSCLQKLLIERDPDG 847

Query:   974 AVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLADYGEQKSCAVTTARRLSDFL 1033
             AVA V     DLL N+  DI  S L+  I++   ++K+  DY   K   V  A ++    
Sbjct:   848 AVAYVKQVIADLLCNR-IDI--SHLV--ITKE--LAKT--DYAA-KQAHVELAAKMKKRD 897

Query:  1034 GDTMVKDKGLRCQYIVACEPQGTPVSERAV-PVAIFETDAEI-MKFYLRK 1081
               T  K  G R  Y++    + TP  ++A  P+ + E    I   +YL +
Sbjct:   898 PGTAPK-LGDRVPYVICAAAKNTPAYQKAEDPLYVLENSVPIDATYYLEQ 946

 Score = 43 (20.2 bits), Expect = 6.7e-07, Sum P(4) = 6.7e-07
 Identities = 7/16 (43%), Positives = 13/16 (81%)

Query:   595 LDVAAMYPNIILTNRL 610
             LD A++YP+I++ + L
Sbjct:   586 LDFASLYPSIMMAHNL 601


>TIGR_CMR|SO_1820 [details] [associations]
            symbol:SO_1820 "DNA polymerase II" species:211586
            "Shewanella oneidensis MR-1" [GO:0003887 "DNA-directed DNA
            polymerase activity" evidence=ISS] [GO:0006260 "DNA replication"
            evidence=ISS] InterPro:IPR006133 InterPro:IPR006134
            InterPro:IPR006172 InterPro:IPR012337 InterPro:IPR017964
            Pfam:PF00136 Pfam:PF03104 PRINTS:PR00106 PROSITE:PS00116
            SMART:SM00486 GO:GO:0000166 GO:GO:0003677 GO:GO:0006260
            EMBL:AE014299 GenomeReviews:AE014299_GR SUPFAM:SSF53098
            GO:GO:0003887 HOGENOM:HOG000221829 KO:K02336 OMA:VLDGIDW
            ProtClustDB:PRK05762 Gene3D:3.90.1600.10 InterPro:IPR023211
            HSSP:P21189 RefSeq:NP_717428.1 ProteinModelPortal:Q8EFZ4
            GeneID:1169593 KEGG:son:SO_1820 PATRIC:23523263 Uniprot:Q8EFZ4
        Length = 808

 Score = 108 (43.1 bits), Expect = 1.9e-06, Sum P(3) = 1.9e-06
 Identities = 53/183 (28%), Positives = 80/183 (43%)

Query:   886 VSKTYETHSECSIEFEVDGPYKAMILPASK--EEGILIKKRY--AVFNDDGTLA-ELKGF 940
             ++K +E  S   ++FE    Y+   +P  +  EEG   KKRY  A  N  G L    KG 
Sbjct:   607 ITKDFELESFLELQFERH--YEQFFMPTLRGSEEGS--KKRYVGAWRNVSGELEITFKGM 662

Query:   941 EIKRRGELKLIKVFQAELFDKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELID 1000
             E  R     L +  QAEL+++  +   I    + V        +L    GK   D ELI 
Sbjct:   663 EQVRSDWSPLARKVQAELYERMFNQRDISGYLADVIG------EL--QAGK--RDDELIF 712

Query:  1001 YISESSTMSKSLADYGEQKSCAVTTARRLSDFLGDTMVKDKGLRCQYIVACE-PQGTPVS 1059
                 S  M ++L +Y  + S  V  AR+L +  G      +G +  Y++    P+  PVS
Sbjct:   713 ----SKRMRRNLEEYTAKSSPHVKVARQLCELTGKASYSKRGAQIDYVITVNGPE--PVS 766

Query:  1060 ERA 1062
              R+
Sbjct:   767 HRS 769

 Score = 83 (34.3 bits), Expect = 1.9e-06, Sum P(3) = 1.9e-06
 Identities = 23/72 (31%), Positives = 40/72 (55%)

Query:   774 LQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIG-KPLELDTD 832
             L  A K I+NS YG +  +G  ++  ++A  +T  G +I++  R  IE++G + +  DTD
Sbjct:   514 LSQAIKIIMNSLYGVLGSQGCVFHDAKLASSITMRGHQIMKQTRAWIEEMGYQVIYGDTD 573

Query:   833 GIWCVLPGSFPE 844
               +  L G  P+
Sbjct:   574 STFVHL-GYEPD 584

 Score = 64 (27.6 bits), Expect = 1.9e-06, Sum P(3) = 1.9e-06
 Identities = 61/299 (20%), Positives = 121/299 (40%)

Query:   307 VNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELG-----FQC 361
             V++E  L+R   A   E  P + + ++   FD   L  RA  H   +    G     ++ 
Sbjct:   221 VSDEAMLIRRLIAWFAEFDPDVIIGWSVVTFDLALLYRRALLHRIPLRLGRGGALLEWKV 280

Query:   362 D-KNQGEC-RAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVR-- 417
             D K + E         LD   W+K   Y  +    L+ V +A LG      + E+ V+  
Sbjct:   281 DNKFRPETLNLPGRVVLDGIDWLKAAFYHFERFS-LEFVAQALLGEGKAIHDVENRVQEI 339

Query:   418 ---FAKEKPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLC-E 473
                F ++K Q +A Y+++D+   + ++  +   + F+LA    ++  E+ R G+      
Sbjct:   340 DALFTEDK-QSLAHYNLTDSRLVWDIF-EHTQLWDFALARA-ELTGLELGRVGASVAAFN 396

Query:   474 MLLMVQAYKANVICPNKHQSDPEKFYRNHLLESETYIGGHVECLESGVFRSDLPTSFKLD 533
              L +   ++A  + P +  S   +    ++++S      H+   +       +  +F +D
Sbjct:   397 HLYLPHLHRAGYVAPAEPASQGIESPGGYVMDSVPGFYQHILVFDFKSLYPSIIRTFLID 456

Query:   534 PSAYEQLLNNLDRDLQYAIKVEGKMDLESVSNYDEVKNAIMEKLLRLQEEPIRE-ECPL 591
             P    + L +    L  +  V G +     S    +   +++ L   +E+  RE   PL
Sbjct:   457 PKGLIEGLGDDSLVLDESETVTGFLGAR-FSRRQPILPKLIQTLSEQREKAKREANAPL 514

 Score = 42 (19.8 bits), Expect = 0.00028, Sum P(3) = 0.00028
 Identities = 10/36 (27%), Positives = 19/36 (52%)

Query:   585 IREECPLIY-HL---DVAAMYPNIILTNRLQPPSIV 616
             + +  P  Y H+   D  ++YP+II T  + P  ++
Sbjct:   426 VMDSVPGFYQHILVFDFKSLYPSIIRTFLIDPKGLI 461


>GENEDB_PFALCIPARUM|PF10_0165 [details] [associations]
            symbol:PF10_0165 "DNA polymerase delta
            catalytic subunit" species:5833 "Plasmodium falciparum" [GO:0003887
            "DNA-directed DNA polymerase activity" evidence=ISS] [GO:0043625
            "delta DNA polymerase complex" evidence=ISS] [GO:0008310
            "single-stranded DNA specific 3'-5' exodeoxyribonuclease activity"
            evidence=ISS] InterPro:IPR004578 InterPro:IPR006133
            InterPro:IPR006134 InterPro:IPR006172 InterPro:IPR012337
            InterPro:IPR017964 Pfam:PF00136 Pfam:PF03104 PRINTS:PR00106
            PROSITE:PS00116 SMART:SM00486 GO:GO:0000166 GO:GO:0003677
            GO:GO:0006260 SUPFAM:SSF53098 EMBL:AE014185 GO:GO:0003887
            Gene3D:3.90.1600.10 InterPro:IPR023211 TIGRFAMs:TIGR00592 KO:K02327
            InterPro:IPR025687 Pfam:PF14260 HOGENOM:HOG000036616 OMA:MIEQTKQ
            GO:GO:0043625 ProtClustDB:PTZ00166 GO:GO:0008310
            RefSeq:XP_001347450.1 ProteinModelPortal:Q7KQL4
            EnsemblProtists:PF10_0165:mRNA GeneID:810323 KEGG:pfa:PF10_0165
            EuPathDB:PlasmoDB:PF3D7_1017000 Uniprot:Q7KQL4
        Length = 1094

 Score = 144 (55.7 bits), Expect = 1.3e-05, Sum P(3) = 1.3e-05
 Identities = 102/399 (25%), Positives = 156/399 (39%)

Query:    66 IDLYFVSQDG-STFKSKYKFRPYFYAATKE--------KMEMDVEAYLR-----RRYESQ 111
             I +Y + +DG S   + + F PYFY    +        K+EM +   L      + YE +
Sbjct:   119 IRIYSLRKDGCSVLINVHNFFPYFYVEKPDDFDNEDLIKLEMLMNENLNLNSQYKIYEKK 178

Query:   112 IADIEILEKEDLDLKNHLSGLHKSYLKISFDTVQQLMDVKKDLLHVVERNQAKFDAAEAY 171
             I  IEI++ E L +    +G  K +LKI+    + +  +KK    +V  N         Y
Sbjct:   179 ILKIEIVKTESL-MYFKKNG-KKDFLKITVLLPKMVPSLKKYFEGIVHVNNKSIGGI-VY 235

Query:   172 ESILTGKREQRPQDFLDCIVDLREYDVPYHIRFAIDNDVRCGQWYDVSISSTGPL-LEKR 230
             E+ L           +     +      Y+IR        C    D+S     P+ LE  
Sbjct:   236 EANLPFILRYIIDHKITGSSWINCKKGHYYIRNKNKKISNCTFEIDISYEHVEPITLENE 295

Query:   231 VDLLQRAEVHVCAFDIETTKLPLK-FPDADYDIIMMISYMLDGQGYLIINRECVGEDIED 289
                 Q  ++ + +FDIE  KL  K FP+A  D I+ IS +L  QG  I N  C       
Sbjct:   296 YQ--QIPKLRILSFDIECIKLDGKGFPEAKNDPIIQISSILYFQGEPIDN--CTKFIFTL 351

Query:   290 LEYTPKPEFEGYFKVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHH 349
             LE    P   G   V   N+E  LL  W   +  + P     YN   FD P++  R    
Sbjct:   352 LECASIP---GS-NVIWFNDEKTLLEAWNEFIIRIDPDFLTGYNIINFDLPYILNRGTAL 407

Query:   350 GFKMSEELG-----FQCDKNQGECRAKFACH----LDCFAWVKRDSY-LPQGSQGLKAVT 399
               K  + LG         K+      +F  H    ++ F  ++ D Y L +    LK+ T
Sbjct:   408 NLKKLKFLGRIKNVASTVKDSSFSSKQFGTHETKEINIFGRIQFDVYDLIKRDYKLKSYT 467

Query:   400 KAKLGYDPLEVNPEDMVRFAKEKPQMMASYSVSDAVATY 438
                + ++ L+   ED V ++        S      +ATY
Sbjct:   468 LNYVSFEFLKEQKED-VHYSIMNDLQNESPESRKRIATY 505

 Score = 63 (27.2 bits), Expect = 1.3e-05, Sum P(3) = 1.3e-05
 Identities = 22/85 (25%), Positives = 40/85 (47%)

Query:   739 KGLNKVWKGKLSEAKASGNSIKIQEAQDMV-VLYDSLQLAHKCILNSFYGYV-MRKGARW 796
             KG+  +   +L EA+     +   E  ++  ++ +  QLA K   NS YGY     G + 
Sbjct:   650 KGILPLIVEELIEARKKVKLLIKNEKNNITKMVLNGRQLALKISANSVYGYTGASSGGQL 709

Query:   797 YSMEMAGVVTYTGAKIIQNARLLIE 821
               +E+A  +T  G  +I+  +  +E
Sbjct:   710 PCLEVAVSITTLGRSMIEKTKERVE 734

 Score = 53 (23.7 bits), Expect = 0.00039, Sum P(3) = 0.00039
 Identities = 26/109 (23%), Positives = 46/109 (42%)

Query:   472 CEMLLMVQAYKANVIC--PNKHQSDPEKFYRNHLLESETYIGGHVEC-LESGVFRSDLPT 528
             C  LL+ +   A ++   PNKH     K       +    I   +E  L   +   +L +
Sbjct:   797 CPYLLLNKKRYAGLLYTNPNKHDKMDCKGIETVRRDFCILIQQMMETVLNKLLIEKNLNS 856

Query:   529 SFKLDPSAYEQLL-NNLDRDLQYAIKVEGKMDLESVSNYDEVKNAIMEK 576
             + +   S  ++LL NN+D  L    K  GK D E+   + E+   + ++
Sbjct:   857 AIEYTKSKIKELLTNNIDMSLLVVTKSLGKTDYETRLPHVELAKKLKQR 905

 Score = 43 (20.2 bits), Expect = 1.3e-05, Sum P(3) = 1.3e-05
 Identities = 7/16 (43%), Positives = 13/16 (81%)

Query:   595 LDVAAMYPNIILTNRL 610
             LD A++YP+I++ + L
Sbjct:   597 LDFASLYPSIMIAHNL 612

 Score = 40 (19.1 bits), Expect = 0.00063, Sum P(2) = 0.00063
 Identities = 17/86 (19%), Positives = 34/86 (39%)

Query:   742 NKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHKCILNSFYGYVMRKGARWYSMEM 801
             N+ ++G        G  I+     D   LY S+ +AH    N  Y  +++       ++ 
Sbjct:   574 NEKYEGATVLEPIKGYYIEPISTLDFASLYPSIMIAH----NLCYSTLIKSNHEVSDLQN 629

Query:   802 AGVVTYTGAKIIQNARLLIEKIGKPL 827
               + T  G   ++  +  ++K   PL
Sbjct:   630 DDITTIQGKNNLKFVKKNVKKGILPL 655

 Score = 38 (18.4 bits), Expect = 0.00039, Sum P(3) = 0.00039
 Identities = 5/20 (25%), Positives = 14/20 (70%)

Query:   719 RENSFYVDTVRSFRDRRYEY 738
             +E S Y+  ++ F++++ E+
Sbjct:  1023 KEFSIYMQKIKDFKNKQNEF 1042


>UNIPROTKB|Q7KQL4 [details] [associations]
            symbol:PF10_0165 "DNA polymerase" species:36329 "Plasmodium
            falciparum 3D7" [GO:0003887 "DNA-directed DNA polymerase activity"
            evidence=ISS] [GO:0008310 "single-stranded DNA specific 3'-5'
            exodeoxyribonuclease activity" evidence=ISS] [GO:0043625 "delta DNA
            polymerase complex" evidence=ISS] InterPro:IPR004578
            InterPro:IPR006133 InterPro:IPR006134 InterPro:IPR006172
            InterPro:IPR012337 InterPro:IPR017964 Pfam:PF00136 Pfam:PF03104
            PRINTS:PR00106 PROSITE:PS00116 SMART:SM00486 GO:GO:0000166
            GO:GO:0003677 GO:GO:0006260 SUPFAM:SSF53098 EMBL:AE014185
            GO:GO:0003887 Gene3D:3.90.1600.10 InterPro:IPR023211
            TIGRFAMs:TIGR00592 KO:K02327 InterPro:IPR025687 Pfam:PF14260
            HOGENOM:HOG000036616 OMA:MIEQTKQ GO:GO:0043625 ProtClustDB:PTZ00166
            GO:GO:0008310 RefSeq:XP_001347450.1 ProteinModelPortal:Q7KQL4
            EnsemblProtists:PF10_0165:mRNA GeneID:810323 KEGG:pfa:PF10_0165
            EuPathDB:PlasmoDB:PF3D7_1017000 Uniprot:Q7KQL4
        Length = 1094

 Score = 144 (55.7 bits), Expect = 1.3e-05, Sum P(3) = 1.3e-05
 Identities = 102/399 (25%), Positives = 156/399 (39%)

Query:    66 IDLYFVSQDG-STFKSKYKFRPYFYAATKE--------KMEMDVEAYLR-----RRYESQ 111
             I +Y + +DG S   + + F PYFY    +        K+EM +   L      + YE +
Sbjct:   119 IRIYSLRKDGCSVLINVHNFFPYFYVEKPDDFDNEDLIKLEMLMNENLNLNSQYKIYEKK 178

Query:   112 IADIEILEKEDLDLKNHLSGLHKSYLKISFDTVQQLMDVKKDLLHVVERNQAKFDAAEAY 171
             I  IEI++ E L +    +G  K +LKI+    + +  +KK    +V  N         Y
Sbjct:   179 ILKIEIVKTESL-MYFKKNG-KKDFLKITVLLPKMVPSLKKYFEGIVHVNNKSIGGI-VY 235

Query:   172 ESILTGKREQRPQDFLDCIVDLREYDVPYHIRFAIDNDVRCGQWYDVSISSTGPL-LEKR 230
             E+ L           +     +      Y+IR        C    D+S     P+ LE  
Sbjct:   236 EANLPFILRYIIDHKITGSSWINCKKGHYYIRNKNKKISNCTFEIDISYEHVEPITLENE 295

Query:   231 VDLLQRAEVHVCAFDIETTKLPLK-FPDADYDIIMMISYMLDGQGYLIINRECVGEDIED 289
                 Q  ++ + +FDIE  KL  K FP+A  D I+ IS +L  QG  I N  C       
Sbjct:   296 YQ--QIPKLRILSFDIECIKLDGKGFPEAKNDPIIQISSILYFQGEPIDN--CTKFIFTL 351

Query:   290 LEYTPKPEFEGYFKVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHH 349
             LE    P   G   V   N+E  LL  W   +  + P     YN   FD P++  R    
Sbjct:   352 LECASIP---GS-NVIWFNDEKTLLEAWNEFIIRIDPDFLTGYNIINFDLPYILNRGTAL 407

Query:   350 GFKMSEELG-----FQCDKNQGECRAKFACH----LDCFAWVKRDSY-LPQGSQGLKAVT 399
               K  + LG         K+      +F  H    ++ F  ++ D Y L +    LK+ T
Sbjct:   408 NLKKLKFLGRIKNVASTVKDSSFSSKQFGTHETKEINIFGRIQFDVYDLIKRDYKLKSYT 467

Query:   400 KAKLGYDPLEVNPEDMVRFAKEKPQMMASYSVSDAVATY 438
                + ++ L+   ED V ++        S      +ATY
Sbjct:   468 LNYVSFEFLKEQKED-VHYSIMNDLQNESPESRKRIATY 505

 Score = 63 (27.2 bits), Expect = 1.3e-05, Sum P(3) = 1.3e-05
 Identities = 22/85 (25%), Positives = 40/85 (47%)

Query:   739 KGLNKVWKGKLSEAKASGNSIKIQEAQDMV-VLYDSLQLAHKCILNSFYGYV-MRKGARW 796
             KG+  +   +L EA+     +   E  ++  ++ +  QLA K   NS YGY     G + 
Sbjct:   650 KGILPLIVEELIEARKKVKLLIKNEKNNITKMVLNGRQLALKISANSVYGYTGASSGGQL 709

Query:   797 YSMEMAGVVTYTGAKIIQNARLLIE 821
               +E+A  +T  G  +I+  +  +E
Sbjct:   710 PCLEVAVSITTLGRSMIEKTKERVE 734

 Score = 53 (23.7 bits), Expect = 0.00039, Sum P(3) = 0.00039
 Identities = 26/109 (23%), Positives = 46/109 (42%)

Query:   472 CEMLLMVQAYKANVIC--PNKHQSDPEKFYRNHLLESETYIGGHVEC-LESGVFRSDLPT 528
             C  LL+ +   A ++   PNKH     K       +    I   +E  L   +   +L +
Sbjct:   797 CPYLLLNKKRYAGLLYTNPNKHDKMDCKGIETVRRDFCILIQQMMETVLNKLLIEKNLNS 856

Query:   529 SFKLDPSAYEQLL-NNLDRDLQYAIKVEGKMDLESVSNYDEVKNAIMEK 576
             + +   S  ++LL NN+D  L    K  GK D E+   + E+   + ++
Sbjct:   857 AIEYTKSKIKELLTNNIDMSLLVVTKSLGKTDYETRLPHVELAKKLKQR 905

 Score = 43 (20.2 bits), Expect = 1.3e-05, Sum P(3) = 1.3e-05
 Identities = 7/16 (43%), Positives = 13/16 (81%)

Query:   595 LDVAAMYPNIILTNRL 610
             LD A++YP+I++ + L
Sbjct:   597 LDFASLYPSIMIAHNL 612

 Score = 40 (19.1 bits), Expect = 0.00063, Sum P(2) = 0.00063
 Identities = 17/86 (19%), Positives = 34/86 (39%)

Query:   742 NKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHKCILNSFYGYVMRKGARWYSMEM 801
             N+ ++G        G  I+     D   LY S+ +AH    N  Y  +++       ++ 
Sbjct:   574 NEKYEGATVLEPIKGYYIEPISTLDFASLYPSIMIAH----NLCYSTLIKSNHEVSDLQN 629

Query:   802 AGVVTYTGAKIIQNARLLIEKIGKPL 827
               + T  G   ++  +  ++K   PL
Sbjct:   630 DDITTIQGKNNLKFVKKNVKKGILPL 655

 Score = 38 (18.4 bits), Expect = 0.00039, Sum P(3) = 0.00039
 Identities = 5/20 (25%), Positives = 14/20 (70%)

Query:   719 RENSFYVDTVRSFRDRRYEY 738
             +E S Y+  ++ F++++ E+
Sbjct:  1023 KEFSIYMQKIKDFKNKQNEF 1042


>UNIPROTKB|P26811 [details] [associations]
            symbol:dpo1 "DNA polymerase 1" species:273057 "Sulfolobus
            solfataricus P2" [GO:0003887 "DNA-directed DNA polymerase activity"
            evidence=IBA] [GO:0005694 "chromosome" evidence=IBA] [GO:0006297
            "nucleotide-excision repair, DNA gap filling" evidence=IBA]
            [GO:0008408 "3'-5' exonuclease activity" evidence=IBA] [GO:0019985
            "translesion synthesis" evidence=IBA] InterPro:IPR006133
            InterPro:IPR006134 InterPro:IPR006172 InterPro:IPR012337
            InterPro:IPR017964 Pfam:PF00136 Pfam:PF03104 PRINTS:PR00106
            PROSITE:PS00116 SMART:SM00486 GO:GO:0005694 GO:GO:0000166
            GO:GO:0003677 GO:GO:0006260 SUPFAM:SSF53098 EMBL:AE006641
            GenomeReviews:AE006641_GR GO:GO:0008408 GO:GO:0003887 GO:GO:0006297
            eggNOG:COG0417 GO:GO:0019985 Gene3D:3.90.1600.10 InterPro:IPR023211
            EMBL:X64466 EMBL:U92875 EMBL:Y18930 PIR:F90201 PIR:S23019
            RefSeq:NP_342079.1 PDB:1S5J PDBsum:1S5J ProteinModelPortal:P26811
            SMR:P26811 DIP:DIP-48850N GeneID:1454836 KEGG:sso:SSO0552
            HOGENOM:HOG000108124 KO:K02319 OMA:HKPYFLT ProtClustDB:PRK05761
            EvolutionaryTrace:P26811 Uniprot:P26811
        Length = 882

 Score = 134 (52.2 bits), Expect = 2.4e-05, Sum P(4) = 2.4e-05
 Identities = 79/315 (25%), Positives = 132/315 (41%)

Query:   225 PLLEKRVDLLQRAEVHVCAFDIET-TKLPLKFPD---ADYDIIMMISYMLDG-QGYLIIN 279
             P+ E  +  ++R      A DIE  T +  + PD   A++ II +     DG +  L++N
Sbjct:   216 PIFETEIPKIKRV-----AIDIEVYTPVKGRIPDSQKAEFPIISIALAGSDGLKKVLVLN 270

Query:   280 RECVGEDIEDLEYTPKPEFEGYFKVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDW 339
             R  V E    L+        G   V   N E ELL  +F  + E  P I +T+NGD FD 
Sbjct:   271 RNDVNEGSVKLD--------G-ISVERFNTEYELLGRFFDILLEY-P-IVLTFNGDDFDL 319

Query:   340 PFLETRAAHHGFKMSEELGFQCDKNQGECRAKFACHLDCFAWVKRDS---YLPQGSQG-- 394
             P++  RA   G+   EE+       + E +     H+D + +    +   Y  +G     
Sbjct:   320 PYIYFRALKLGY-FPEEIPIDV-AGKDEAKYLAGLHIDLYKFFFNKAVRNYAFEGKYNEY 377

Query:   395 -LKAVTKAKLGYDPLEVNPEDMVRFAKEKPQMMASYSVSDAVATYYLYMTYVHPFIFSLA 453
              L AV KA LG   ++V  + ++ F     + +  Y+  DA  T  L  T+ +     L 
Sbjct:   378 NLDAVAKALLGTSKVKV--DTLISFLDV--EKLIEYNFRDAEITLQL-TTFNNDLTMKLI 432

Query:   454 TIIP----MSPDEVLRKGSGTLCEMLLMVQAYKANVICPNKHQ--SDPEKFYRNHLLESE 507
              +      +  +E+ R    T  + L   +  K N + P K +  +       + L++ +
Sbjct:   433 VLFSRISRLGIEELTRTEISTWVKNLYYWEHRKRNWLIPLKEEILAKSSNIRTSALIKGK 492

Query:   508 TYIGGHVECLESGVF 522
              Y G  V    +G+F
Sbjct:   493 GYKGAVVIDPPAGIF 507

 Score = 69 (29.3 bits), Expect = 2.4e-05, Sum P(4) = 2.4e-05
 Identities = 28/107 (26%), Positives = 51/107 (47%)

Query:   740 GLNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHKCILNSFYGYVMRKGARWYSM 799
             GL + ++ K+ + KA   +     +++  +LYD +Q A K  +N+ YG    +    Y+ 
Sbjct:   568 GLLRDFRVKIYKKKAKNPN----NSEEQKLLYDVVQRAMKVFINATYGVFGAETFPLYAP 623

Query:   800 EMAGVVTYTGAKIIQNARLLIEKIGKP-LELDTDGIWCVLPGSFPEN 845
              +A  VT  G  +I +      + G   L  DTD ++ + P   P+N
Sbjct:   624 AVAESVTALGRYVITSTVKKAREEGLTVLYGDTDSLFLLNP---PKN 667

 Score = 44 (20.5 bits), Expect = 2.4e-05, Sum P(4) = 2.4e-05
 Identities = 16/55 (29%), Positives = 30/55 (54%)

Query:    15 KKQKLIRSA--EEELEAKLGYDLFSEGDKRLGWLLTFASSSLEDEDTRKVYSCID 67
             +++K++R    EE  E K+ + L  + D + G     A   L D++T+K+Y+  D
Sbjct:    32 EEKKVVRREWLEEAQENKIYFLLQVDYDGKKGK----AVCKLFDKETQKIYALYD 82

 Score = 42 (19.8 bits), Expect = 2.4e-05, Sum P(4) = 2.4e-05
 Identities = 8/13 (61%), Positives = 11/13 (84%)

Query:   595 LDVAAMYPNIILT 607
             LD A++YP+II T
Sbjct:   513 LDFASLYPSIIRT 525


>UNIPROTKB|Q747M0 [details] [associations]
            symbol:GSU3245 "DNA polymerase" species:243231 "Geobacter
            sulfurreducens PCA" [GO:0003887 "DNA-directed DNA polymerase
            activity" evidence=IBA] [GO:0005694 "chromosome" evidence=IBA]
            [GO:0006297 "nucleotide-excision repair, DNA gap filling"
            evidence=IBA] [GO:0008408 "3'-5' exonuclease activity"
            evidence=IBA] [GO:0019985 "translesion synthesis" evidence=IBA]
            InterPro:IPR006133 InterPro:IPR006134 InterPro:IPR006172
            InterPro:IPR012337 Pfam:PF00136 Pfam:PF03104 SMART:SM00486
            GO:GO:0005694 GO:GO:0000166 GO:GO:0003677 GO:GO:0006260
            EMBL:AE017180 GenomeReviews:AE017180_GR SUPFAM:SSF53098
            GO:GO:0008408 GO:GO:0003887 GO:GO:0006297 GO:GO:0019985
            Gene3D:3.90.1600.10 InterPro:IPR023211 RefSeq:NP_954286.1
            ProteinModelPortal:Q747M0 GeneID:2686404 KEGG:gsu:GSU3245
            PATRIC:22029333 HOGENOM:HOG000147542 OMA:EVDTDGI
            ProtClustDB:CLSK813582 BioCyc:GSUL243231:GH27-3221-MONOMER
            Uniprot:Q747M0
        Length = 745

 Score = 99 (39.9 bits), Expect = 4.5e-05, Sum P(6) = 4.5e-05
 Identities = 25/71 (35%), Positives = 40/71 (56%)

Query:   771 YDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARL--LIEKIGKPLE 828
             Y +LQ   K ++NSFYGY+      +     A  VT  G ++I  A L  L ++  +P+E
Sbjct:   466 YAALQQTFKVLINSFYGYLGAPLHHFADPAAAAEVTRAGRQLI-GAMLDWLQDRGARPVE 524

Query:   829 LDTDGIWCVLP 839
             +DTDG++ + P
Sbjct:   525 VDTDGVYFIPP 535

 Score = 74 (31.1 bits), Expect = 4.5e-05, Sum P(6) = 4.5e-05
 Identities = 20/83 (24%), Positives = 39/83 (46%)

Query:   272 GQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNVNNEIELLRLWFAHMQEVKPGIYVT 331
             G+G+   N +   + I  +    +  +E +   T ++ E E+L      ++E  P +   
Sbjct:   151 GEGFEFSNPDREDDRILSIALMEEGGYEAFLSATEMD-EREMLERLGGIIRERDPDVIEG 209

Query:   332 YNGDYFDWPFLETRAAHHGFKMS 354
             +N   FD  ++  RAA HG K++
Sbjct:   210 HNIFRFDLEYIRARAARHGVKLA 232

 Score = 57 (25.1 bits), Expect = 4.5e-05, Sum P(6) = 4.5e-05
 Identities = 18/61 (29%), Positives = 31/61 (50%)

Query:   898 IEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAE 957
             IE E+ G Y+AM   + K       K YA+   DG +  ++G  ++ RG  + ++ F  E
Sbjct:   559 IEVELAGRYRAMF--SYKA------KNYALLGHDGRIT-VRGSALRSRGIERYLREFMGE 609

Query:   958 L 958
             +
Sbjct:   610 M 610

 Score = 55 (24.4 bits), Expect = 4.5e-05, Sum P(6) = 4.5e-05
 Identities = 8/21 (38%), Positives = 15/21 (71%)

Query:   592 IYHLDVAAMYPNIILTNRLQP 612
             I H DV ++YP+++L  ++ P
Sbjct:   408 IVHCDVTSLYPSLMLARKIAP 428

 Score = 41 (19.5 bits), Expect = 4.5e-05, Sum P(6) = 4.5e-05
 Identities = 11/31 (35%), Positives = 18/31 (58%)

Query:  1678 PARADESLDD--DSQVDIVSSWNIAEYLPKE 1706
             PAR DE++D   D    ++  +  A +LP+E
Sbjct:   712 PARPDENVDYYVDKLAQLMKKF--APFLPRE 740

 Score = 39 (18.8 bits), Expect = 4.5e-05, Sum P(6) = 4.5e-05
 Identities = 7/20 (35%), Positives = 13/20 (65%)

Query:   201 HIR-FAIDNDVRCGQWYDVS 219
             H+R  A+D +  CG+ ++ S
Sbjct:   138 HLRRLALDIETSCGEGFEFS 157


>TIGR_CMR|GSU_3245 [details] [associations]
            symbol:GSU_3245 "DNA polymerase II, putative"
            species:243231 "Geobacter sulfurreducens PCA" [GO:0003887
            "DNA-directed DNA polymerase activity" evidence=ISS] [GO:0006260
            "DNA replication" evidence=ISS] InterPro:IPR006133
            InterPro:IPR006134 InterPro:IPR006172 InterPro:IPR012337
            Pfam:PF00136 Pfam:PF03104 SMART:SM00486 GO:GO:0005694 GO:GO:0000166
            GO:GO:0003677 GO:GO:0006260 EMBL:AE017180 GenomeReviews:AE017180_GR
            SUPFAM:SSF53098 GO:GO:0008408 GO:GO:0003887 GO:GO:0006297
            GO:GO:0019985 Gene3D:3.90.1600.10 InterPro:IPR023211
            RefSeq:NP_954286.1 ProteinModelPortal:Q747M0 GeneID:2686404
            KEGG:gsu:GSU3245 PATRIC:22029333 HOGENOM:HOG000147542 OMA:EVDTDGI
            ProtClustDB:CLSK813582 BioCyc:GSUL243231:GH27-3221-MONOMER
            Uniprot:Q747M0
        Length = 745

 Score = 99 (39.9 bits), Expect = 4.5e-05, Sum P(6) = 4.5e-05
 Identities = 25/71 (35%), Positives = 40/71 (56%)

Query:   771 YDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARL--LIEKIGKPLE 828
             Y +LQ   K ++NSFYGY+      +     A  VT  G ++I  A L  L ++  +P+E
Sbjct:   466 YAALQQTFKVLINSFYGYLGAPLHHFADPAAAAEVTRAGRQLI-GAMLDWLQDRGARPVE 524

Query:   829 LDTDGIWCVLP 839
             +DTDG++ + P
Sbjct:   525 VDTDGVYFIPP 535

 Score = 74 (31.1 bits), Expect = 4.5e-05, Sum P(6) = 4.5e-05
 Identities = 20/83 (24%), Positives = 39/83 (46%)

Query:   272 GQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNVNNEIELLRLWFAHMQEVKPGIYVT 331
             G+G+   N +   + I  +    +  +E +   T ++ E E+L      ++E  P +   
Sbjct:   151 GEGFEFSNPDREDDRILSIALMEEGGYEAFLSATEMD-EREMLERLGGIIRERDPDVIEG 209

Query:   332 YNGDYFDWPFLETRAAHHGFKMS 354
             +N   FD  ++  RAA HG K++
Sbjct:   210 HNIFRFDLEYIRARAARHGVKLA 232

 Score = 57 (25.1 bits), Expect = 4.5e-05, Sum P(6) = 4.5e-05
 Identities = 18/61 (29%), Positives = 31/61 (50%)

Query:   898 IEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAE 957
             IE E+ G Y+AM   + K       K YA+   DG +  ++G  ++ RG  + ++ F  E
Sbjct:   559 IEVELAGRYRAMF--SYKA------KNYALLGHDGRIT-VRGSALRSRGIERYLREFMGE 609

Query:   958 L 958
             +
Sbjct:   610 M 610

 Score = 55 (24.4 bits), Expect = 4.5e-05, Sum P(6) = 4.5e-05
 Identities = 8/21 (38%), Positives = 15/21 (71%)

Query:   592 IYHLDVAAMYPNIILTNRLQP 612
             I H DV ++YP+++L  ++ P
Sbjct:   408 IVHCDVTSLYPSLMLARKIAP 428

 Score = 41 (19.5 bits), Expect = 4.5e-05, Sum P(6) = 4.5e-05
 Identities = 11/31 (35%), Positives = 18/31 (58%)

Query:  1678 PARADESLDD--DSQVDIVSSWNIAEYLPKE 1706
             PAR DE++D   D    ++  +  A +LP+E
Sbjct:   712 PARPDENVDYYVDKLAQLMKKF--APFLPRE 740

 Score = 39 (18.8 bits), Expect = 4.5e-05, Sum P(6) = 4.5e-05
 Identities = 7/20 (35%), Positives = 13/20 (65%)

Query:   201 HIR-FAIDNDVRCGQWYDVS 219
             H+R  A+D +  CG+ ++ S
Sbjct:   138 HLRRLALDIETSCGEGFEFS 157


>UNIPROTKB|Q8X0N7 [details] [associations]
            symbol:B10H4.020 "DNA polymerase" species:5141 "Neurospora
            crassa" [GO:0000084 "S phase of mitotic cell cycle" evidence=IBA]
            [GO:0003887 "DNA-directed DNA polymerase activity" evidence=IBA]
            [GO:0005634 "nucleus" evidence=IBA] [GO:0006287 "base-excision
            repair, gap-filling" evidence=IBA] [GO:0006297 "nucleotide-excision
            repair, DNA gap filling" evidence=IBA] [GO:0007346 "regulation of
            mitotic cell cycle" evidence=IBA] [GO:0008408 "3'-5' exonuclease
            activity" evidence=IBA] [GO:0043137 "DNA replication, removal of
            RNA primer" evidence=IBA] [GO:0043625 "delta DNA polymerase
            complex" evidence=IBA] [GO:0045004 "DNA replication proofreading"
            evidence=IBA] [GO:0019985 "translesion synthesis" evidence=IBA]
            InterPro:IPR004578 InterPro:IPR006133 InterPro:IPR006134
            InterPro:IPR006172 InterPro:IPR012337 InterPro:IPR017964
            Pfam:PF00136 Pfam:PF03104 PRINTS:PR00106 PROSITE:PS00116
            SMART:SM00486 GO:GO:0007346 GO:GO:0000166 GO:GO:0003677
            SUPFAM:SSF53098 GO:GO:0000084 GO:GO:0008408 GO:GO:0043137
            GO:GO:0003887 GO:GO:0006297 eggNOG:COG0417 GO:GO:0045004
            Gene3D:3.90.1600.10 InterPro:IPR023211 GO:GO:0006287
            TIGRFAMs:TIGR00592 InterPro:IPR025687 Pfam:PF14260
            HOGENOM:HOG000036616 GO:GO:0043625 OrthoDB:EOG4B01XB HSSP:Q56366
            EMBL:AL670010 ProteinModelPortal:Q8X0N7 STRING:Q8X0N7
            Uniprot:Q8X0N7
        Length = 1104

 Score = 138 (53.6 bits), Expect = 5.1e-05, Sum P(4) = 5.1e-05
 Identities = 69/312 (22%), Positives = 137/312 (43%)

Query:    47 LTFASSSLEDEDTRKVYSCIDLYFVSQDGSTFKSKYK-FRPYFYAATKEKMEMDVEAYLR 105
             L F S   E+       + I L+ V+++G++     K F+ Y Y         D     R
Sbjct:   109 LCFQSIEAEEGFLHGGQATIKLFGVTENGNSVLLHVKDFKHYLYVQAPVSFGPDDCPKYR 168

Query:   106 RRYESQIA-DIEILEKEDLDLKNHLSGLHKS----YLKISFDTVQQLMDVKKDLLHVVER 160
                E+Q+A     +    L ++ ++ G   +    Y+K++ +  + L  V++    ++E 
Sbjct:   169 AFLETQLAMPTPAIHSVTLTMRENMYGFQGNTQNPYIKVTVNDPKFLPRVRR----LIET 224

Query:   161 NQAKFDAA-EAYESILTGKREQRPQDFL-DC-IVDLREYDVPYHIRFAIDNDVRCGQWYD 217
             N+A +    ++  SI+T    Q    F+ DC I  +   + P    + + ND       +
Sbjct:   225 NKANWKGMWKSDGSIMTFDDIQYLLRFMVDCSIAGMSWVEAPAG-SYQLVNDKHSNCQIE 283

Query:   218 VSISSTGPLLEKRV-DLLQRAEVHVCAFDIETTKLPLKFPDADYDIIMMISYMLDGQGYL 276
               +S    +  K V +  + A + + +FDIE       FP+  +D ++ I+ ++   G  
Sbjct:   284 AEMSYRDLIAHKPVGEWSKMAPLRILSFDIECAGRKGIFPEPQHDSVIQIANIVTKYG-- 341

Query:   277 IINRECVGEDIEDLEYTPKPEFEGYFKVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDY 336
                ++    ++  L+ T  P      ++ + + E ++LR W   +++V P I + YN   
Sbjct:   342 --EKKPFVRNVFCLD-TTSPIVAT--QILSFDREEDMLREWRNFLEQVDPDIIIGYNIAN 396

Query:   337 FDWPFLETRAAH 348
             FD+P+L  RA H
Sbjct:   397 FDFPYLLDRAKH 408

 Score = 66 (28.3 bits), Expect = 5.1e-05, Sum P(4) = 5.1e-05
 Identities = 21/85 (24%), Positives = 40/85 (47%)

Query:   739 KGL-NKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHKCILNSFYGYVMRKGARWY 797
             KGL  ++ +  LS  K +   + +++      + +  QLA K   NS YG       +  
Sbjct:   650 KGLLAQILEELLSARKQAKRELAVEKDPFKKAVLNGRQLALKVSANSVYGLTGATNGKLP 709

Query:   798 SMEMAGVVTYTGAKIIQNARLLIEK 822
              +E+A  VT  G ++I+  +  +E+
Sbjct:   710 CLEIASSVTSFGRQMIERTKKEVEE 734

 Score = 45 (20.9 bits), Expect = 5.1e-05, Sum P(4) = 5.1e-05
 Identities = 22/94 (23%), Positives = 38/94 (40%)

Query:  1220 LRQQLEPSEVSDQQPSSQNAIDTENIDRIVDYKGWLELKKRKWKDNLDRRKKQKLGSLRA 1279
             LR  L   +V   Q   ++ I  + +   +D    L + K   K+N D ++     + R 
Sbjct:   844 LRMILIDQDVPGAQAYVKDTI-ADLLQNKIDMSK-LVITKALTKENYDAKQAHVELAQRM 901

Query:  1280 SHQANGVSESLGDMINHKEAQRRTGVGSYFRRQE 1313
               +  G +  LGD + +   +  TG    F R E
Sbjct:   902 KKRDAGSAPGLGDRVAYVMVKGATG-SKNFERSE 934

 Score = 41 (19.5 bits), Expect = 5.1e-05, Sum P(4) = 5.1e-05
 Identities = 12/30 (40%), Positives = 18/30 (60%)

Query:   583 EPIRE--ECPLIYHLDVAAMYPNIILTNRL 610
             EP R   + P I  LD A++YP+I+  + L
Sbjct:   584 EPTRGYYDVP-IATLDFASLYPSIMQAHNL 612


>UNIPROTKB|Q9NAH1 [details] [associations]
            symbol:Y47D3A.29 "DNA polymerase" species:6239
            "Caenorhabditis elegans" [GO:0019985 "translesion synthesis"
            evidence=IBA] [GO:0008408 "3'-5' exonuclease activity"
            evidence=IBA] [GO:0006303 "double-strand break repair via
            nonhomologous end joining" evidence=IBA] [GO:0006297
            "nucleotide-excision repair, DNA gap filling" evidence=IBA]
            [GO:0006260 "DNA replication" evidence=IBA] [GO:0005658 "alpha DNA
            polymerase:primase complex" evidence=IBA] [GO:0005634 "nucleus"
            evidence=IBA] [GO:0003887 "DNA-directed DNA polymerase activity"
            evidence=IBA] InterPro:IPR004578 InterPro:IPR006133
            InterPro:IPR006134 InterPro:IPR006172 InterPro:IPR012337
            InterPro:IPR015088 InterPro:IPR017964 Pfam:PF00136 Pfam:PF03104
            Pfam:PF08996 PRINTS:PR00106 PROSITE:PS00116 SMART:SM00486
            GO:GO:0008340 GO:GO:0009792 GO:GO:0035046 GO:GO:0000166
            GO:GO:0003677 GO:GO:0006260 GO:GO:0001882 SUPFAM:SSF53098
            GO:GO:0008408 GO:GO:0006303 GO:GO:0003887 EMBL:AL117202
            GO:GO:0019985 Gene3D:3.90.1600.10 InterPro:IPR023211 GO:GO:0005658
            HOGENOM:HOG000163524 InterPro:IPR024647 Pfam:PF12254
            TIGRFAMs:TIGR00592 GeneTree:ENSGT00550000074891 HSSP:Q56366
            GeneID:176544 KEGG:cel:CELE_Y47D3A.29 CTD:176544
            RefSeq:NP_001255109.1 ProteinModelPortal:Q9NAH1 SMR:Q9NAH1
            IntAct:Q9NAH1 MINT:MINT-6669806 STRING:Q9NAH1
            EnsemblMetazoa:Y47D3A.29a UCSC:Y47D3A.29 WormBase:Y47D3A.29a
            InParanoid:Q9NAH1 NextBio:893018 ArrayExpress:Q9NAH1 Uniprot:Q9NAH1
        Length = 1428

 Score = 98 (39.6 bits), Expect = 8.8e-05, Sum P(5) = 8.8e-05
 Identities = 49/174 (28%), Positives = 84/174 (48%)

Query:   898 IEFEVDGPYKAMILPASKEEGILIKKRYAVF--NDDGTLA--ELKGFEIKRRGELKLIKV 953
             +E ++DG +K M+L        L KK+YA    N D  +   ELKG +I RR   +L K 
Sbjct:  1003 LELDLDGVFKRMLL--------LKKKKYAALTINPDTKVEAKELKGLDIVRRDWSQLAKE 1054

Query:   954 FQAELFDKFLHGS-TIEECYSAVAAVANRWLDLL-DNQGKDIADSELIDYISESSTMSKS 1011
                 + DK L  S T +E  S++        DLL + + K  + +  ++    S  ++++
Sbjct:  1055 TGTAVVDKILDASLTRDEMVSSID-------DLLREIRAKLDSGTVPLEMFQISKQLTRN 1107

Query:  1012 LADYGEQKS-CAVTTARRLSDFLGDTMVKDKGLRCQYIVACEPQGT--PVSERA 1062
                Y + K+ C    A+RL+   G   ++   +  +Y++ CE  GT  P ++RA
Sbjct:  1108 PEQYADVKAQCHAAVAQRLNKS-GKFNLRHNDI-VEYVI-CE-DGTDNPATQRA 1157

 Score = 97 (39.2 bits), Expect = 8.8e-05, Sum P(5) = 8.8e-05
 Identities = 28/89 (31%), Positives = 48/89 (53%)

Query:   748 KLSEAKASGNSI-KIQEAQDMVVLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVT 806
             KL E +    S+ K +  +      D  Q+A K   NS YG +  + +R+Y+  +A +VT
Sbjct:   885 KLVECRRDVKSLMKSERNEAKKKQMDIRQMALKLTANSMYGCLGFQYSRFYAKPLAALVT 944

Query:   807 YTGAKIIQNARLLIEKIGKPLEL-DTDGI 834
               G +I+ +++ L+EK+G  +   DTD I
Sbjct:   945 AKGREILMHSKDLVEKMGYSVVYGDTDSI 973

 Score = 52 (23.4 bits), Expect = 8.8e-05, Sum P(5) = 8.8e-05
 Identities = 30/146 (20%), Positives = 60/146 (41%)

Query:   447 PFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVICPNKHQSDPEKFYRNHLLES 506
             P    ++ I+       +  G     E LL+    KA++I P+K+ S   K  +    E 
Sbjct:   748 PLYIQISQIVGGIASRTMMGGRAERNEYLLLHAFEKADLIAPDKYNSSESKKKKEESQEG 807

Query:   507 ET-------YIGGHVECLESGVFRS-DLPTSFK-LDPSAYEQLLNNLDRDLQYAIKVEGK 557
             +        Y GG V   + G++ +  L   F  L PS  ++  N     L+Y+   + +
Sbjct:   808 DEKKSGKAQYSGGLVLEPKKGLYETLILLLDFNSLYPSIIQEY-NICYTTLEYSKDSDEQ 866

Query:   558 MDLESVSNYDEVKNAIMEKLLRLQEE 583
             + +   ++ + V    + KL+  + +
Sbjct:   867 LSVPQSTDIEGVLPREIRKLVECRRD 892

 Score = 46 (21.3 bits), Expect = 8.8e-05, Sum P(5) = 8.8e-05
 Identities = 25/133 (18%), Positives = 51/133 (38%)

Query:   193 LREYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLLEKRVDLLQRAEVHVCAFDIETTKLP 252
             L E+    H++   D D      Y V+   T P+  +++  ++           ET K+ 
Sbjct:   211 LAEHKFQRHVKVDEDEDYGIPDDYPVASPVTSPVKTEKMAEVEAPTAPAIQKIEETVKME 270

Query:   253 LKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNVNNEIE 312
              +  +   D +     + D  G          ED ED++   K   E ++ +   +N  +
Sbjct:   271 TEHLEEVEDSLAKFRVIEDWTG-----GSSSQED-EDVKVEVKTGSEAFYTMGGEDNTTK 324

Query:   313 LLRL-WFAHMQEV 324
              +R+ W    ++V
Sbjct:   325 AIRMYWIDAYEDV 337

 Score = 45 (20.9 bits), Expect = 8.8e-05, Sum P(5) = 8.8e-05
 Identities = 16/67 (23%), Positives = 35/67 (52%)

Query:  1921 YHLQDLVCIRCNQVKAAHLAEQCAC--AGSFRCKEDASDFRSKMQIFLNIANRQGFQLLQ 1978
             + LQ+   +  NQV    ++E  A     +F+C E   +F++++Q       R+G + ++
Sbjct:  1283 WDLQEHQAVIGNQVDR-QMSEFVARHHLAAFKCDEPTCEFKTRVQTMKWC--REGLECIR 1339

Query:  1979 ECTSWIL 1985
              C++ +L
Sbjct:  1340 -CSTGVL 1345

 Score = 40 (19.1 bits), Expect = 0.00032, Sum P(5) = 0.00032
 Identities = 16/57 (28%), Positives = 24/57 (42%)

Query:    48 TFASSSLEDEDTRKVYSCIDLYFVSQDGSTFKSKYKFRPYFYAATKEKMEMDVEAYL 104
             T  SSS EDED +         F +  G    +K   R Y+  A ++  + +   YL
Sbjct:   291 TGGSSSQEDEDVKVEVKTGSEAFYTMGGEDNTTK-AIRMYWIDAYEDVHKANGTVYL 346


>WB|WBGene00012936 [details] [associations]
            symbol:Y47D3A.29a species:6239 "Caenorhabditis elegans"
            [GO:0006260 "DNA replication" evidence=IEA;ISS] [GO:0000166
            "nucleotide binding" evidence=IEA] [GO:0003677 "DNA binding"
            evidence=IEA] [GO:0003887 "DNA-directed DNA polymerase activity"
            evidence=IEA;ISS] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0006139 "nucleobase-containing compound metabolic process"
            evidence=IEA] [GO:0001882 "nucleoside binding" evidence=IEA]
            [GO:0009792 "embryo development ending in birth or egg hatching"
            evidence=IMP] [GO:0035046 "pronuclear migration" evidence=IMP]
            [GO:0008340 "determination of adult lifespan" evidence=IMP]
            [GO:0005634 "nucleus" evidence=ISS] InterPro:IPR004578
            InterPro:IPR006133 InterPro:IPR006134 InterPro:IPR006172
            InterPro:IPR012337 InterPro:IPR015088 InterPro:IPR017964
            Pfam:PF00136 Pfam:PF03104 Pfam:PF08996 PRINTS:PR00106
            PROSITE:PS00116 SMART:SM00486 GO:GO:0008340 GO:GO:0009792
            GO:GO:0035046 GO:GO:0000166 GO:GO:0003677 GO:GO:0006260
            GO:GO:0001882 SUPFAM:SSF53098 GO:GO:0008408 GO:GO:0006303
            GO:GO:0003887 EMBL:AL117202 eggNOG:COG0417 GO:GO:0019985
            Gene3D:3.90.1600.10 InterPro:IPR023211 GO:GO:0005658
            HOGENOM:HOG000163524 OMA:GSGTDME InterPro:IPR024647 Pfam:PF12254
            TIGRFAMs:TIGR00592 GeneTree:ENSGT00550000074891
            RefSeq:NP_001255108.1 ProteinModelPortal:C7IVS4 SMR:C7IVS4
            STRING:C7IVS4 PaxDb:C7IVS4 EnsemblMetazoa:Y47D3A.29b GeneID:176544
            KEGG:cel:CELE_Y47D3A.29 CTD:176544 WormBase:Y47D3A.29b
            ArrayExpress:C7IVS4 Uniprot:C7IVS4
        Length = 1456

 Score = 98 (39.6 bits), Expect = 9.7e-05, Sum P(5) = 9.7e-05
 Identities = 49/174 (28%), Positives = 84/174 (48%)

Query:   898 IEFEVDGPYKAMILPASKEEGILIKKRYAVF--NDDGTLA--ELKGFEIKRRGELKLIKV 953
             +E ++DG +K M+L        L KK+YA    N D  +   ELKG +I RR   +L K 
Sbjct:  1003 LELDLDGVFKRMLL--------LKKKKYAALTINPDTKVEAKELKGLDIVRRDWSQLAKE 1054

Query:   954 FQAELFDKFLHGS-TIEECYSAVAAVANRWLDLL-DNQGKDIADSELIDYISESSTMSKS 1011
                 + DK L  S T +E  S++        DLL + + K  + +  ++    S  ++++
Sbjct:  1055 TGTAVVDKILDASLTRDEMVSSID-------DLLREIRAKLDSGTVPLEMFQISKQLTRN 1107

Query:  1012 LADYGEQKS-CAVTTARRLSDFLGDTMVKDKGLRCQYIVACEPQGT--PVSERA 1062
                Y + K+ C    A+RL+   G   ++   +  +Y++ CE  GT  P ++RA
Sbjct:  1108 PEQYADVKAQCHAAVAQRLNKS-GKFNLRHNDI-VEYVI-CE-DGTDNPATQRA 1157

 Score = 97 (39.2 bits), Expect = 9.7e-05, Sum P(5) = 9.7e-05
 Identities = 28/89 (31%), Positives = 48/89 (53%)

Query:   748 KLSEAKASGNSI-KIQEAQDMVVLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVT 806
             KL E +    S+ K +  +      D  Q+A K   NS YG +  + +R+Y+  +A +VT
Sbjct:   885 KLVECRRDVKSLMKSERNEAKKKQMDIRQMALKLTANSMYGCLGFQYSRFYAKPLAALVT 944

Query:   807 YTGAKIIQNARLLIEKIGKPLEL-DTDGI 834
               G +I+ +++ L+EK+G  +   DTD I
Sbjct:   945 AKGREILMHSKDLVEKMGYSVVYGDTDSI 973

 Score = 52 (23.4 bits), Expect = 9.7e-05, Sum P(5) = 9.7e-05
 Identities = 30/146 (20%), Positives = 60/146 (41%)

Query:   447 PFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVICPNKHQSDPEKFYRNHLLES 506
             P    ++ I+       +  G     E LL+    KA++I P+K+ S   K  +    E 
Sbjct:   748 PLYIQISQIVGGIASRTMMGGRAERNEYLLLHAFEKADLIAPDKYNSSESKKKKEESQEG 807

Query:   507 ET-------YIGGHVECLESGVFRS-DLPTSFK-LDPSAYEQLLNNLDRDLQYAIKVEGK 557
             +        Y GG V   + G++ +  L   F  L PS  ++  N     L+Y+   + +
Sbjct:   808 DEKKSGKAQYSGGLVLEPKKGLYETLILLLDFNSLYPSIIQEY-NICYTTLEYSKDSDEQ 866

Query:   558 MDLESVSNYDEVKNAIMEKLLRLQEE 583
             + +   ++ + V    + KL+  + +
Sbjct:   867 LSVPQSTDIEGVLPREIRKLVECRRD 892

 Score = 46 (21.3 bits), Expect = 9.7e-05, Sum P(5) = 9.7e-05
 Identities = 25/133 (18%), Positives = 51/133 (38%)

Query:   193 LREYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLLEKRVDLLQRAEVHVCAFDIETTKLP 252
             L E+    H++   D D      Y V+   T P+  +++  ++           ET K+ 
Sbjct:   211 LAEHKFQRHVKVDEDEDYGIPDDYPVASPVTSPVKTEKMAEVEAPTAPAIQKIEETVKME 270

Query:   253 LKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNVNNEIE 312
              +  +   D +     + D  G          ED ED++   K   E ++ +   +N  +
Sbjct:   271 TEHLEEVEDSLAKFRVIEDWTG-----GSSSQED-EDVKVEVKTGSEAFYTMGGEDNTTK 324

Query:   313 LLRL-WFAHMQEV 324
              +R+ W    ++V
Sbjct:   325 AIRMYWIDAYEDV 337

 Score = 45 (20.9 bits), Expect = 9.7e-05, Sum P(5) = 9.7e-05
 Identities = 16/67 (23%), Positives = 35/67 (52%)

Query:  1921 YHLQDLVCIRCNQVKAAHLAEQCAC--AGSFRCKEDASDFRSKMQIFLNIANRQGFQLLQ 1978
             + LQ+   +  NQV    ++E  A     +F+C E   +F++++Q       R+G + ++
Sbjct:  1283 WDLQEHQAVIGNQVDR-QMSEFVARHHLAAFKCDEPTCEFKTRVQTMKWC--REGLECIR 1339

Query:  1979 ECTSWIL 1985
              C++ +L
Sbjct:  1340 -CSTGVL 1345

 Score = 40 (19.1 bits), Expect = 0.00035, Sum P(5) = 0.00035
 Identities = 16/57 (28%), Positives = 24/57 (42%)

Query:    48 TFASSSLEDEDTRKVYSCIDLYFVSQDGSTFKSKYKFRPYFYAATKEKMEMDVEAYL 104
             T  SSS EDED +         F +  G    +K   R Y+  A ++  + +   YL
Sbjct:   291 TGGSSSQEDEDVKVEVKTGSEAFYTMGGEDNTTK-AIRMYWIDAYEDVHKANGTVYL 346


>UNIPROTKB|C7IVS4 [details] [associations]
            symbol:Y47D3A.29 "DNA polymerase" species:6239
            "Caenorhabditis elegans" [GO:0019985 "translesion synthesis"
            evidence=IBA] [GO:0008408 "3'-5' exonuclease activity"
            evidence=IBA] [GO:0006303 "double-strand break repair via
            nonhomologous end joining" evidence=IBA] [GO:0006297
            "nucleotide-excision repair, DNA gap filling" evidence=IBA]
            [GO:0006260 "DNA replication" evidence=IBA] [GO:0005658 "alpha DNA
            polymerase:primase complex" evidence=IBA] [GO:0005634 "nucleus"
            evidence=IBA] [GO:0003887 "DNA-directed DNA polymerase activity"
            evidence=IBA] InterPro:IPR004578 InterPro:IPR006133
            InterPro:IPR006134 InterPro:IPR006172 InterPro:IPR012337
            InterPro:IPR015088 InterPro:IPR017964 Pfam:PF00136 Pfam:PF03104
            Pfam:PF08996 PRINTS:PR00106 PROSITE:PS00116 SMART:SM00486
            GO:GO:0008340 GO:GO:0009792 GO:GO:0035046 GO:GO:0000166
            GO:GO:0003677 GO:GO:0006260 GO:GO:0001882 SUPFAM:SSF53098
            GO:GO:0008408 GO:GO:0006303 GO:GO:0003887 EMBL:AL117202
            eggNOG:COG0417 GO:GO:0019985 Gene3D:3.90.1600.10 InterPro:IPR023211
            GO:GO:0005658 HOGENOM:HOG000163524 OMA:GSGTDME InterPro:IPR024647
            Pfam:PF12254 TIGRFAMs:TIGR00592 GeneTree:ENSGT00550000074891
            RefSeq:NP_001255108.1 ProteinModelPortal:C7IVS4 SMR:C7IVS4
            STRING:C7IVS4 PaxDb:C7IVS4 EnsemblMetazoa:Y47D3A.29b GeneID:176544
            KEGG:cel:CELE_Y47D3A.29 CTD:176544 WormBase:Y47D3A.29b
            ArrayExpress:C7IVS4 Uniprot:C7IVS4
        Length = 1456

 Score = 98 (39.6 bits), Expect = 9.7e-05, Sum P(5) = 9.7e-05
 Identities = 49/174 (28%), Positives = 84/174 (48%)

Query:   898 IEFEVDGPYKAMILPASKEEGILIKKRYAVF--NDDGTLA--ELKGFEIKRRGELKLIKV 953
             +E ++DG +K M+L        L KK+YA    N D  +   ELKG +I RR   +L K 
Sbjct:  1003 LELDLDGVFKRMLL--------LKKKKYAALTINPDTKVEAKELKGLDIVRRDWSQLAKE 1054

Query:   954 FQAELFDKFLHGS-TIEECYSAVAAVANRWLDLL-DNQGKDIADSELIDYISESSTMSKS 1011
                 + DK L  S T +E  S++        DLL + + K  + +  ++    S  ++++
Sbjct:  1055 TGTAVVDKILDASLTRDEMVSSID-------DLLREIRAKLDSGTVPLEMFQISKQLTRN 1107

Query:  1012 LADYGEQKS-CAVTTARRLSDFLGDTMVKDKGLRCQYIVACEPQGT--PVSERA 1062
                Y + K+ C    A+RL+   G   ++   +  +Y++ CE  GT  P ++RA
Sbjct:  1108 PEQYADVKAQCHAAVAQRLNKS-GKFNLRHNDI-VEYVI-CE-DGTDNPATQRA 1157

 Score = 97 (39.2 bits), Expect = 9.7e-05, Sum P(5) = 9.7e-05
 Identities = 28/89 (31%), Positives = 48/89 (53%)

Query:   748 KLSEAKASGNSI-KIQEAQDMVVLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVT 806
             KL E +    S+ K +  +      D  Q+A K   NS YG +  + +R+Y+  +A +VT
Sbjct:   885 KLVECRRDVKSLMKSERNEAKKKQMDIRQMALKLTANSMYGCLGFQYSRFYAKPLAALVT 944

Query:   807 YTGAKIIQNARLLIEKIGKPLEL-DTDGI 834
               G +I+ +++ L+EK+G  +   DTD I
Sbjct:   945 AKGREILMHSKDLVEKMGYSVVYGDTDSI 973

 Score = 52 (23.4 bits), Expect = 9.7e-05, Sum P(5) = 9.7e-05
 Identities = 30/146 (20%), Positives = 60/146 (41%)

Query:   447 PFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVICPNKHQSDPEKFYRNHLLES 506
             P    ++ I+       +  G     E LL+    KA++I P+K+ S   K  +    E 
Sbjct:   748 PLYIQISQIVGGIASRTMMGGRAERNEYLLLHAFEKADLIAPDKYNSSESKKKKEESQEG 807

Query:   507 ET-------YIGGHVECLESGVFRS-DLPTSFK-LDPSAYEQLLNNLDRDLQYAIKVEGK 557
             +        Y GG V   + G++ +  L   F  L PS  ++  N     L+Y+   + +
Sbjct:   808 DEKKSGKAQYSGGLVLEPKKGLYETLILLLDFNSLYPSIIQEY-NICYTTLEYSKDSDEQ 866

Query:   558 MDLESVSNYDEVKNAIMEKLLRLQEE 583
             + +   ++ + V    + KL+  + +
Sbjct:   867 LSVPQSTDIEGVLPREIRKLVECRRD 892

 Score = 46 (21.3 bits), Expect = 9.7e-05, Sum P(5) = 9.7e-05
 Identities = 25/133 (18%), Positives = 51/133 (38%)

Query:   193 LREYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLLEKRVDLLQRAEVHVCAFDIETTKLP 252
             L E+    H++   D D      Y V+   T P+  +++  ++           ET K+ 
Sbjct:   211 LAEHKFQRHVKVDEDEDYGIPDDYPVASPVTSPVKTEKMAEVEAPTAPAIQKIEETVKME 270

Query:   253 LKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNVNNEIE 312
              +  +   D +     + D  G          ED ED++   K   E ++ +   +N  +
Sbjct:   271 TEHLEEVEDSLAKFRVIEDWTG-----GSSSQED-EDVKVEVKTGSEAFYTMGGEDNTTK 324

Query:   313 LLRL-WFAHMQEV 324
              +R+ W    ++V
Sbjct:   325 AIRMYWIDAYEDV 337

 Score = 45 (20.9 bits), Expect = 9.7e-05, Sum P(5) = 9.7e-05
 Identities = 16/67 (23%), Positives = 35/67 (52%)

Query:  1921 YHLQDLVCIRCNQVKAAHLAEQCAC--AGSFRCKEDASDFRSKMQIFLNIANRQGFQLLQ 1978
             + LQ+   +  NQV    ++E  A     +F+C E   +F++++Q       R+G + ++
Sbjct:  1283 WDLQEHQAVIGNQVDR-QMSEFVARHHLAAFKCDEPTCEFKTRVQTMKWC--REGLECIR 1339

Query:  1979 ECTSWIL 1985
              C++ +L
Sbjct:  1340 -CSTGVL 1345

 Score = 40 (19.1 bits), Expect = 0.00035, Sum P(5) = 0.00035
 Identities = 16/57 (28%), Positives = 24/57 (42%)

Query:    48 TFASSSLEDEDTRKVYSCIDLYFVSQDGSTFKSKYKFRPYFYAATKEKMEMDVEAYL 104
             T  SSS EDED +         F +  G    +K   R Y+  A ++  + +   YL
Sbjct:   291 TGGSSSQEDEDVKVEVKTGSEAFYTMGGEDNTTK-AIRMYWIDAYEDVHKANGTVYL 346


>UNIPROTKB|A6V6S5 [details] [associations]
            symbol:polB "DNA polymerase" species:381754 "Pseudomonas
            aeruginosa PA7" [GO:0003887 "DNA-directed DNA polymerase activity"
            evidence=IBA] [GO:0005694 "chromosome" evidence=IBA] [GO:0006297
            "nucleotide-excision repair, DNA gap filling" evidence=IBA]
            [GO:0008408 "3'-5' exonuclease activity" evidence=IBA] [GO:0019985
            "translesion synthesis" evidence=IBA] InterPro:IPR006133
            InterPro:IPR006134 InterPro:IPR006172 InterPro:IPR012337
            InterPro:IPR017964 Pfam:PF00136 Pfam:PF03104 PRINTS:PR00106
            PROSITE:PS00116 SMART:SM00486 GO:GO:0005694 GO:GO:0000166
            GO:GO:0003677 GO:GO:0006260 EMBL:CP000744 GenomeReviews:CP000744_GR
            SUPFAM:SSF53098 GO:GO:0008408 GO:GO:0003887 GO:GO:0006297
            eggNOG:COG0417 HOGENOM:HOG000221829 KO:K02336 ProtClustDB:PRK05762
            GO:GO:0019985 Gene3D:3.90.1600.10 InterPro:IPR023211
            RefSeq:YP_001348760.1 ProteinModelPortal:A6V6S5 SMR:A6V6S5
            STRING:A6V6S5 GeneID:5354072 KEGG:pap:PSPA7_3400 PATRIC:19828452
            OMA:SATWSFP BioCyc:PAER381754:GHMY-3442-MONOMER Uniprot:A6V6S5
        Length = 788

 Score = 93 (37.8 bits), Expect = 0.00023, Sum P(3) = 0.00023
 Identities = 24/69 (34%), Positives = 36/69 (52%)

Query:   774 LQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLEL-DTD 832
             L  A K I+N+FYG +   G R++   +A  +T  G +I++  R LIE  G  +   DTD
Sbjct:   491 LSQALKIIMNAFYGVLGSSGCRFFDPRLASSITLRGHRIMRRTRELIEAEGYTVIYGDTD 550

Query:   833 G--IWCVLP 839
                +W   P
Sbjct:   551 STFVWLGSP 559

 Score = 78 (32.5 bits), Expect = 0.00023, Sum P(3) = 0.00023
 Identities = 36/149 (24%), Positives = 63/149 (42%)

Query:   392 SQGLKAVTKAKLGYDPLEVNP----EDMVR-FAKEKPQMMASYSVSDA-VATYYLYMTYV 445
             S  L+ V +  LG      NP    +++ R FA++KP + A Y++ D  + T     T +
Sbjct:   293 SFSLENVARTLLGEGKAIDNPYQRMDEIDRMFAEDKPAL-ARYNLKDCELVTRIFARTEL 351

Query:   446 HPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVICPNKHQSDPEKFYRNHLLE 505
               F+   AT+  +  D     GS      L M   ++A  + PN  +  PE      +++
Sbjct:   352 LDFLLERATVTGLPADR--SGGSVAAFTHLYMPLMHRAGFVAPNLGEKRPEASPGGFVMD 409

Query:   506 SETYIGGHVECLESGVFRSDLPTSFKLDP 534
             S   +   V  L+       +  +F +DP
Sbjct:   410 SRPGLYESVLVLDYKSLYPSIIRTFLIDP 438

 Score = 63 (27.2 bits), Expect = 0.00023, Sum P(3) = 0.00023
 Identities = 22/68 (32%), Positives = 32/68 (47%)

Query:   897 SIEFEVDGPYKAMILPASK--EEGILIKKRYAVF---NDDGTLAELKGFEIKRRGELKLI 951
             ++E + +  Y+  ++P  +  EEG   KKRYA      D G     KG E  R     L 
Sbjct:   593 ALELQFETHYRRFLMPTVRGAEEGS--KKRYAGLVRRADGGEEMVFKGLETVRTDWSPLA 650

Query:   952 KVFQAELF 959
             + FQ EL+
Sbjct:   651 QRFQQELY 658


>UNIPROTKB|F6Y1C9 [details] [associations]
            symbol:POLA1 "DNA polymerase" species:9615 "Canis lupus
            familiaris" [GO:0003887 "DNA-directed DNA polymerase activity"
            evidence=IEA] [GO:0006260 "DNA replication" evidence=IEA]
            [GO:0003677 "DNA binding" evidence=IEA] [GO:0001882 "nucleoside
            binding" evidence=IEA] [GO:0000166 "nucleotide binding"
            evidence=IEA] InterPro:IPR004578 InterPro:IPR006133
            InterPro:IPR006134 InterPro:IPR006172 InterPro:IPR012337
            InterPro:IPR015088 InterPro:IPR017964 Pfam:PF00136 Pfam:PF03104
            Pfam:PF08996 PRINTS:PR00106 PROSITE:PS00116 SMART:SM00486
            GO:GO:0000166 GO:GO:0003677 GO:GO:0006260 GO:GO:0001882
            SUPFAM:SSF53098 GO:GO:0003887 Gene3D:3.90.1600.10
            InterPro:IPR023211 OMA:GSGTDME InterPro:IPR024647 Pfam:PF12254
            TIGRFAMs:TIGR00592 GeneTree:ENSGT00550000074891
            Ensembl:ENSCAFT00000021463 EMBL:AAEX03026211 Uniprot:F6Y1C9
        Length = 1467

 Score = 107 (42.7 bits), Expect = 0.00061, Sum P(4) = 0.00061
 Identities = 31/92 (33%), Positives = 51/92 (55%)

Query:   748 KLSEAKASGNSI-KIQEAQ-DMVVLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVV 805
             KL E +     + K Q+   D+V+ YD  Q A K   NS YG +    +R+Y+  +A +V
Sbjct:   923 KLVERRKQVKQLMKQQDLNPDLVLQYDIRQKALKLTANSMYGCLGFSYSRFYAKPLAALV 982

Query:   806 TYTGAKIIQNARLLIEKIGKPLEL---DTDGI 834
             TY G +I+ + + +++K+   LE+   DTD I
Sbjct:   983 TYKGREILMHTKEMVQKMN--LEVIYGDTDSI 1012

 Score = 86 (35.3 bits), Expect = 0.00061, Sum P(4) = 0.00061
 Identities = 39/166 (23%), Positives = 73/166 (43%)

Query:   898 IEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAE 957
             +E ++DG +K+++L   K+ G L+ +  +  N   T  ELKG +I RR    L K    E
Sbjct:  1042 LEIDIDGVFKSLLLLKKKKYGALVVEPTSDGNYS-TKQELKGLDIVRRDWCDLAK----E 1096

Query:   958 LFDKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSEL-IDYISESSTMSKSLADYG 1016
                 F+ G  + +  S    V N    L++  G+++ +  + +     +  ++K   DY 
Sbjct:  1097 T-GNFVIGQILSD-QSRDTIVENIQKRLIEI-GENVLNGSVPVSQFEINKALTKDPQDYP 1153

Query:  1017 EQKSCAVTTARRLSDFLGDTMVKDKGLRCQYIVACEPQGTPVSERA 1062
             ++KS          +  G   +K  G    Y++  +      S+RA
Sbjct:  1154 DKKSLPHVHVALWMNSQGGRKMK-AGDTVSYVICQDGSNLTASQRA 1198

 Score = 47 (21.6 bits), Expect = 0.00061, Sum P(4) = 0.00061
 Identities = 55/272 (20%), Positives = 94/272 (34%)

Query:   298 FEGYFKVTNVNNEIE-----LLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRA----AH 348
             F+ Y K  NV  EI      LL  + A + ++ P I V +N   F+   L  R       
Sbjct:   604 FKDYIKEKNVKVEIAATERTLLGFFLAKVHKIDPDIIVGHNIYGFELEVLLQRINVCKVP 663

Query:   349 HGFKMSEELGFQCDKNQGEC---RAKFAC-HLDCFAWVKRDSYLPQGSQGLKAVTKAKLG 404
             H  K+         K  G          C  + C   +     +   S  L  + +  L 
Sbjct:   664 HWSKIGRLKRSNMPKLGGRSGFGERNATCGRMICDVEISAKELIRCKSYHLSELVQQILR 723

Query:   405 YDPLEVNPEDMVRFAKEKPQMM--ASYSVSDAVATYYLYMTY-VHPFIFSLATIIPMSPD 461
              + + +  E++     E   ++    ++  DA     +     V P    +  I      
Sbjct:   724 TERVVIPMENVRNMYSESSHLLYLLEHTWKDARFILQIMCELNVLPLALQITNIAGNIMS 783

Query:   462 EVLRKGSGTLCEMLLMVQAYKANVICPNKHQ-SDPEKFYRNHLLESETYIGGHVECLESG 520
               L  G     E LL+   Y+ N I P+K     P++     L + +  + G     + G
Sbjct:   784 RTLMGGRSERNEFLLLHAFYENNYIVPDKQIFRKPQQ----KLGDEDEELDGDANKYKKG 839

Query:   521 VFRSDLPTSFKLDPSA--YEQLLNNLDRDLQY 550
               ++       LDP A  Y++ +  LD +  Y
Sbjct:   840 RKKAAYAGGLVLDPKAGFYDKFILLLDFNSLY 871

 Score = 45 (20.9 bits), Expect = 0.00061, Sum P(4) = 0.00061
 Identities = 9/19 (47%), Positives = 12/19 (63%)

Query:   271 DGQGYLIINRECVGEDIED 289
             DG GY+   RE   +D+ED
Sbjct:    89 DGIGYVEDGREIFDDDLED 107


>UNIPROTKB|E2QVU2 [details] [associations]
            symbol:POLA1 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0006260 "DNA replication" evidence=IEA]
            [GO:0003887 "DNA-directed DNA polymerase activity" evidence=IEA]
            [GO:0003677 "DNA binding" evidence=IEA] [GO:0001882 "nucleoside
            binding" evidence=IEA] [GO:0000166 "nucleotide binding"
            evidence=IEA] InterPro:IPR004578 InterPro:IPR006133
            InterPro:IPR006134 InterPro:IPR006172 InterPro:IPR012337
            InterPro:IPR015088 InterPro:IPR017964 Pfam:PF00136 Pfam:PF03104
            Pfam:PF08996 PRINTS:PR00106 PROSITE:PS00116 SMART:SM00486
            GO:GO:0000166 GO:GO:0003677 GO:GO:0006260 GO:GO:0001882
            SUPFAM:SSF53098 GO:GO:0003887 Gene3D:3.90.1600.10
            InterPro:IPR023211 InterPro:IPR024647 Pfam:PF12254
            TIGRFAMs:TIGR00592 Ensembl:ENSCAFT00000021463 Uniprot:E2QVU2
        Length = 1357

 Score = 107 (42.7 bits), Expect = 0.00070, Sum P(4) = 0.00070
 Identities = 31/92 (33%), Positives = 51/92 (55%)

Query:   748 KLSEAKASGNSI-KIQEAQ-DMVVLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVV 805
             KL E +     + K Q+   D+V+ YD  Q A K   NS YG +    +R+Y+  +A +V
Sbjct:   924 KLVERRKQVKQLMKQQDLNPDLVLQYDIRQKALKLTANSMYGCLGFSYSRFYAKPLAALV 983

Query:   806 TYTGAKIIQNARLLIEKIGKPLEL---DTDGI 834
             TY G +I+ + + +++K+   LE+   DTD I
Sbjct:   984 TYKGREILMHTKEMVQKMN--LEVIYGDTDSI 1013

 Score = 86 (35.3 bits), Expect = 0.00070, Sum P(4) = 0.00070
 Identities = 39/166 (23%), Positives = 73/166 (43%)

Query:   898 IEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAE 957
             +E ++DG +K+++L   K+ G L+ +  +  N   T  ELKG +I RR    L K    E
Sbjct:  1043 LEIDIDGVFKSLLLLKKKKYGALVVEPTSDGNYS-TKQELKGLDIVRRDWCDLAK----E 1097

Query:   958 LFDKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSEL-IDYISESSTMSKSLADYG 1016
                 F+ G  + +  S    V N    L++  G+++ +  + +     +  ++K   DY 
Sbjct:  1098 T-GNFVIGQILSD-QSRDTIVENIQKRLIEI-GENVLNGSVPVSQFEINKALTKDPQDYP 1154

Query:  1017 EQKSCAVTTARRLSDFLGDTMVKDKGLRCQYIVACEPQGTPVSERA 1062
             ++KS          +  G   +K  G    Y++  +      S+RA
Sbjct:  1155 DKKSLPHVHVALWMNSQGGRKMK-AGDTVSYVICQDGSNLTASQRA 1199

 Score = 45 (20.9 bits), Expect = 0.00070, Sum P(4) = 0.00070
 Identities = 9/19 (47%), Positives = 12/19 (63%)

Query:   271 DGQGYLIINRECVGEDIED 289
             DG GY+   RE   +D+ED
Sbjct:    89 DGIGYVEDGREIFDDDLED 107

 Score = 45 (20.9 bits), Expect = 0.00070, Sum P(4) = 0.00070
 Identities = 55/273 (20%), Positives = 94/273 (34%)

Query:   298 FEGYFKVTNVNNEIE-----LLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRA----AH 348
             F+ Y K  NV  EI      LL  + A + ++ P I V +N   F+   L  R       
Sbjct:   604 FKDYIKEKNVKVEIAATERTLLGFFLAKVHKIDPDIIVGHNIYGFELEVLLQRINVCKVP 663

Query:   349 HGFKMSEELGFQCDKNQGEC---RAKFAC-HLDCFAWVKRDSYLPQGSQGLKAVTKAKLG 404
             H  K+         K  G          C  + C   +     +   S  L  + +  L 
Sbjct:   664 HWSKIGRLKRSNMPKLGGRSGFGERNATCGRMICDVEISAKELIRCKSYHLSELVQQILR 723

Query:   405 YDPLEVNPEDMVRFAKEKPQMM--ASYSVSDAVATYYLYMTY-VHPFIFSLATIIPMSPD 461
              + + +  E++     E   ++    ++  DA     +     V P    +  I      
Sbjct:   724 TERVVIPMENVRNMYSESSHLLYLLEHTWKDARFILQIMCELNVLPLALQITNIAGNIMS 783

Query:   462 EVLRKGSGTLCEMLLMVQAYKANVICPNKHQ-SDPEKFYRNHLLESETYIGGHVECLESG 520
               L  G     E LL+   Y+ N I P+K     P++     L + +  + G     + G
Sbjct:   784 RTLMGGRSERNEFLLLHAFYENNYIVPDKQIFRKPQQ----KLGDEDEELDGDANKYKKG 839

Query:   521 VFRSDLPTSFKLDPSA---YEQLLNNLDRDLQY 550
               ++       LDP A   Y++ +  LD +  Y
Sbjct:   840 RKKAAYAGGLVLDPKAAGFYDKFILLLDFNSLY 872


>UNIPROTKB|Q5HTX3 [details] [associations]
            symbol:wlaX "Polysaccharide biosynthesis protein"
            species:195099 "Campylobacter jejuni RM1221" [GO:0000271
            "polysaccharide biosynthetic process" evidence=ISS] [GO:0003824
            "catalytic activity" evidence=ISS] InterPro:IPR012337 GO:GO:0003824
            GO:GO:0003676 EMBL:CP000025 GenomeReviews:CP000025_GR
            SUPFAM:SSF53098 GO:GO:0000271 eggNOG:COG3298 HOGENOM:HOG000261053
            InterPro:IPR019288 Pfam:PF10108 OMA:HLDLMDV RefSeq:YP_179262.1
            ProteinModelPortal:Q5HTX3 STRING:Q5HTX3 GeneID:3231781
            KEGG:cjr:CJE1274 PATRIC:20044344 KO:K07501 ProtClustDB:CLSK879104
            BioCyc:CJEJ195099:GJC0-1300-MONOMER Uniprot:Q5HTX3
        Length = 264

 Score = 120 (47.3 bits), Expect = 0.00077, P = 0.00077
 Identities = 51/224 (22%), Positives = 99/224 (44%)

Query:   234 LQRAEVHVCAFD------IETTKLPLKFPDADYDI-IMMISYMLDGQGYLIINRECVGED 286
             + + E ++C FD      +E  +  L F  +D ++ +  + +  +  G   +        
Sbjct:     1 MAKNEGYICVFDCESVPDVELIRKTLGFEGSDLEVSLKALQWQKEQSGSEFLPLPY--HK 58

Query:   287 IEDLEYTPKPEFEGYFKVTNVN--NEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLET 344
             I  +       F  + KV  ++  NE E++  +F  ++  +P + V++NG  FD P L  
Sbjct:    59 IISICAVLSDNFGKFIKVNKIDGQNEKEMIENFFNFIENYEPKL-VSFNGKNFDMPVLVL 117

Query:   345 RAAHHGFKMSEELGFQCDK-NQGECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKL 403
             RA  +  K +  L  Q DK N  + R     H D       +S L    +G+K  T   +
Sbjct:   118 RALKYNLKAATYLDTQSDKWNNYKTRFSELKHCDLL-----ES-LGSNGRGIKLDTLCSM 171

Query:   404 GYDP--LEVNPEDMVR-FAKEKPQMMASYSVSDAVATYYLYMTY 444
                P   +V+ +++++ F + + + +  Y  SD + TY L++ Y
Sbjct:   172 VGLPGKYDVHGDEVMKLFYENELEKIHEYCESDVLNTYMLFLKY 215


>TIGR_CMR|CJE_1274 [details] [associations]
            symbol:CJE_1274 "polysaccharide biosynthesis protein"
            species:195099 "Campylobacter jejuni RM1221" [GO:0000271
            "polysaccharide biosynthetic process" evidence=ISS] [GO:0003824
            "catalytic activity" evidence=ISS] InterPro:IPR012337 GO:GO:0003824
            GO:GO:0003676 EMBL:CP000025 GenomeReviews:CP000025_GR
            SUPFAM:SSF53098 GO:GO:0000271 eggNOG:COG3298 HOGENOM:HOG000261053
            InterPro:IPR019288 Pfam:PF10108 OMA:HLDLMDV RefSeq:YP_179262.1
            ProteinModelPortal:Q5HTX3 STRING:Q5HTX3 GeneID:3231781
            KEGG:cjr:CJE1274 PATRIC:20044344 KO:K07501 ProtClustDB:CLSK879104
            BioCyc:CJEJ195099:GJC0-1300-MONOMER Uniprot:Q5HTX3
        Length = 264

 Score = 120 (47.3 bits), Expect = 0.00077, P = 0.00077
 Identities = 51/224 (22%), Positives = 99/224 (44%)

Query:   234 LQRAEVHVCAFD------IETTKLPLKFPDADYDI-IMMISYMLDGQGYLIINRECVGED 286
             + + E ++C FD      +E  +  L F  +D ++ +  + +  +  G   +        
Sbjct:     1 MAKNEGYICVFDCESVPDVELIRKTLGFEGSDLEVSLKALQWQKEQSGSEFLPLPY--HK 58

Query:   287 IEDLEYTPKPEFEGYFKVTNVN--NEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLET 344
             I  +       F  + KV  ++  NE E++  +F  ++  +P + V++NG  FD P L  
Sbjct:    59 IISICAVLSDNFGKFIKVNKIDGQNEKEMIENFFNFIENYEPKL-VSFNGKNFDMPVLVL 117

Query:   345 RAAHHGFKMSEELGFQCDK-NQGECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKL 403
             RA  +  K +  L  Q DK N  + R     H D       +S L    +G+K  T   +
Sbjct:   118 RALKYNLKAATYLDTQSDKWNNYKTRFSELKHCDLL-----ES-LGSNGRGIKLDTLCSM 171

Query:   404 GYDP--LEVNPEDMVR-FAKEKPQMMASYSVSDAVATYYLYMTY 444
                P   +V+ +++++ F + + + +  Y  SD + TY L++ Y
Sbjct:   172 VGLPGKYDVHGDEVMKLFYENELEKIHEYCESDVLNTYMLFLKY 215


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.320   0.135   0.407    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0     1988      1948   0.00080  126 3  11 22  0.38    34
                                                     41  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  48
  No. of states in DFA:  639 (68 KB)
  Total size of DFA:  830 KB (2347 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  174.48u 0.21s 174.69t   Elapsed:  00:00:08
  Total cpu time:  174.51u 0.21s 174.72t   Elapsed:  00:00:08
  Start:  Fri May 10 04:51:08 2013   End:  Fri May 10 04:51:16 2013
the Gene Ontology

BLAST Results

Query Summary

Query Sequence

High Scoring Gene Products

Raw Blast Data


Symbol, full name	Information	P value
BLAST match view associations BLAST with TIL2 TIL2 TIL2 AT2G27120	protein from Arabidopsis thaliana	0.
BLAST match view associations BLAST with POLE POLE POLE DNA polymerase	protein from Homo sapiens	0.
BLAST match view associations BLAST with POLE POLE POLE DNA polymerase epsilon catalytic subunit A	protein from Homo sapiens	0.
BLAST match view associations BLAST with POLE POLE POLE DNA polymerase	protein from Gallus gallus	0.
BLAST match view associations BLAST with Pole Pole Pole polymerase (DNA directed), epsilon	protein from Mus musculus	0.
BLAST match view associations BLAST with pole pole pole polymerase (DNA directed), epsilon	gene_product from Danio rerio	0.
BLAST match view associations BLAST with POLE POLE POLE DNA polymerase	protein from Bos taurus	0.
BLAST match view associations BLAST with POLE POLE POLE DNA polymerase	protein from Canis lupus familiaris	0.
BLAST match view associations BLAST with POLE POLE POLE DNA polymerase	protein from Homo sapiens	0.
BLAST match view associations BLAST with POL2 POL2 POL2 Catalytic subunit of DNA polymerase (II) epsilon	gene from Saccharomyces cerevisiae	0.
BLAST match view associations BLAST with MGG_03850 MGG_03850 MGG_03850 DNA polymerase	protein from Magnaporthe oryzae 70-15	0.
BLAST match view associations BLAST with POL2 POL2 POL2	gene_product from Candida albicans	0.
BLAST match view associations BLAST with DDB_G0283189 DDB_G0283189 DDB_G0283189 putative DNA polymerase epsilon subunit A	gene from Dictyostelium discoideum	0.
BLAST match view associations BLAST with POLE POLE POLE DNA polymerase	protein from Gallus gallus	0.
BLAST match view associations BLAST with POLE POLE POLE DNA polymerase	protein from Homo sapiens	0.
BLAST match view associations BLAST with DNApol-epsilon DNApol-epsilon DNApol-epsilon DNA polymerase epsilon	protein from Drosophila melanogaster	0.
BLAST match view associations BLAST with F33H2.5 F33H2.5 F33H2.5	gene from Caenorhabditis elegans	0.
BLAST match view associations BLAST with PFF1470c PFF1470c PFF1470c DNA polymerase epsilon, catalytic subunit a, putative	gene from Plasmodium falciparum	1.2e-221
BLAST match view associations BLAST with PFF1470c PFF1470c PFF1470c DNA polymerase epsilon, catalytic subunit a, putative	protein from Plasmodium falciparum 3D7	1.2e-221
BLAST match view associations BLAST with POLE POLE POLE Uncharacterized protein	protein from Sus scrofa	1.0e-76
BLAST match view associations BLAST with POLE POLE POLE DNA polymerase epsilon catalytic subunit A	protein from Homo sapiens	1.1e-61
BLAST match view associations BLAST with POLE POLE POLE DNA polymerase epsilon catalytic subunit A	protein from Homo sapiens	5.2e-56
BLAST match view associations BLAST with POLE POLE POLE DNA polymerase epsilon catalytic subunit A	protein from Homo sapiens	5.7e-53
BLAST match view associations BLAST with Pole Pole Pole polymerase (DNA directed), epsilon, catalytic subunit	gene from Rattus norvegicus	6.2e-29
BLAST match view associations BLAST with MA_0885 MA_0885 MA_0885 DNA polymerase	protein from Methanosarcina acetivorans C2A	1.2e-11
BLAST match view associations BLAST with VC_1212 VC_1212 VC_1212 DNA polymerase	protein from Vibrio cholerae O1 biovar El Tor str. N16961	1.3e-07
BLAST match view associations BLAST with VC_1212 VC_1212 VC_1212 DNA polymerase II	protein from Vibrio cholerae O1 biovar El Tor	1.3e-07
BLAST match view associations BLAST with polB polB polB DNA polymerase II	protein from Escherichia coli K-12	4.2e-07
BLAST match view associations BLAST with DNApol-delta DNApol-delta DNApol-delta DNA-polymerase-delta	protein from Drosophila melanogaster	6.7e-07
BLAST match view associations BLAST with SO_1820 SO_1820 SO_1820 DNA polymerase II	protein from Shewanella oneidensis MR-1	1.9e-06
BLAST match view associations BLAST with PF10_0165 PF10_0165 PF10_0165 DNA polymerase delta catalytic subunit	gene from Plasmodium falciparum	1.3e-05
BLAST match view associations BLAST with PF10_0165 PF10_0165 PF10_0165 DNA polymerase	protein from Plasmodium falciparum 3D7	1.3e-05
BLAST match view associations BLAST with dpo1 dpo1 dpo1 DNA polymerase 1	protein from Sulfolobus solfataricus P2	2.4e-05
BLAST match view associations BLAST with GSU3245 GSU3245 GSU3245 DNA polymerase	protein from Geobacter sulfurreducens PCA	4.5e-05
BLAST match view associations BLAST with GSU_3245 GSU_3245 GSU_3245 DNA polymerase II, putative	protein from Geobacter sulfurreducens PCA	4.5e-05
BLAST match view associations BLAST with B10H4.020 B10H4.020 B10H4.020 DNA polymerase	protein from Neurospora crassa	5.1e-05
BLAST match view associations BLAST with Y47D3A.29 Y47D3A.29 Y47D3A.29 DNA polymerase	protein from Caenorhabditis elegans	8.8e-05
BLAST match view associations BLAST with Y47D3A.29a Y47D3A.29a Y47D3A.29a	gene from Caenorhabditis elegans	9.7e-05
BLAST match view associations BLAST with Y47D3A.29 Y47D3A.29 Y47D3A.29 DNA polymerase	protein from Caenorhabditis elegans	9.7e-05
BLAST match view associations BLAST with polB polB polB DNA polymerase	protein from Pseudomonas aeruginosa PA7	0.00023
BLAST match view associations BLAST with POLA1 POLA1 POLA1 DNA polymerase	protein from Canis lupus familiaris	0.00061
BLAST match view associations BLAST with POLA1 POLA1 POLA1 Uncharacterized protein	protein from Canis lupus familiaris	0.00070
BLAST match view associations BLAST with wlaX wlaX wlaX Polysaccharide biosynthesis protein	protein from Campylobacter jejuni RM1221	0.00077
BLAST match view associations BLAST with CJE_1274 CJE_1274 CJE_1274 polysaccharide biosynthesis protein	protein from Campylobacter jejuni RM1221	0.00077