BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 000161
         (1988 letters)

Database: nr 
           23,463,169 sequences; 8,064,228,071 total letters

Searching..................................................done



>gi|224132028|ref|XP_002328167.1| predicted protein [Populus trichocarpa]
 gi|222837682|gb|EEE76047.1| predicted protein [Populus trichocarpa]
          Length = 2221

 Score = 2551 bits (6612), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 1218/1414 (86%), Positives = 1312/1414 (92%), Gaps = 5/1414 (0%)

Query: 2    DRRRWDRQDGRRT-KKQKLIRSAEEELEAKLGYDLFSEGDKRLGWLLTFASSSLEDEDTR 60
            + RRWDR+D RR+ KKQKL+R+AEEELE+KLG+DLF+EGDKRLGWLLTF+SSSL+DE+T 
Sbjct: 4    ESRRWDRKDLRRSSKKQKLMRTAEEELESKLGFDLFTEGDKRLGWLLTFSSSSLDDEETG 63

Query: 61   KVYSCIDLYFVSQDGSTFKSKYKFRPYFYAATKEKMEMDVEAYLRRRYESQIADIEILEK 120
            +VYSC+DLYFVSQDGS FKSKYKFRPYFYAATKEKMEMDVE YLRRRYESQIA IEI+EK
Sbjct: 64   RVYSCVDLYFVSQDGSAFKSKYKFRPYFYAATKEKMEMDVEGYLRRRYESQIAYIEIVEK 123

Query: 121  EDLDLKNHLSGLHKSYLKISFDTVQQLMDVKKDLLHVVERNQAKFDAAEAYESILTGKRE 180
            EDLDLKNHLSGLHKSYLKISF TVQQLMDVK+DLLHVVERNQAK DAAEAYESILTGKRE
Sbjct: 124  EDLDLKNHLSGLHKSYLKISFATVQQLMDVKRDLLHVVERNQAKSDAAEAYESILTGKRE 183

Query: 181  QRPQDFLDCIVDLREYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLLEKRVDLLQRAEVH 240
            QRPQDFLDCI+DLREYDVPYH+RFAIDND+RCGQWYDVS+SSTG  LEKR DLLQRAEVH
Sbjct: 184  QRPQDFLDCIIDLREYDVPYHVRFAIDNDIRCGQWYDVSVSSTGVKLEKRTDLLQRAEVH 243

Query: 241  VCAFDIETTKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEG 300
            VCAFDIETTKLPLKFPDADYD+IMMISYM+DGQGYLI NRECVGEDIEDLEYTPKPE+EG
Sbjct: 244  VCAFDIETTKLPLKFPDADYDLIMMISYMVDGQGYLITNRECVGEDIEDLEYTPKPEYEG 303

Query: 301  YFKVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQ 360
             FKVTNV NE+ELL+ WFAHM+EVKPGIYVTYNGDYFDWPFLE+RAA+HGFKM +E+GF 
Sbjct: 304  CFKVTNVKNEVELLKQWFAHMREVKPGIYVTYNGDYFDWPFLESRAAYHGFKMGDEVGFS 363

Query: 361  CDKNQGECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAK 420
            CDKNQGECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAK
Sbjct: 364  CDKNQGECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAK 423

Query: 421  EKPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQA 480
            EKPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQA
Sbjct: 424  EKPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQA 483

Query: 481  YKANVICPNKHQSDPEKFYRNHLLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQL 540
            Y ANVICPNKHQSD +KFY++HLLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYE L
Sbjct: 484  YMANVICPNKHQSDQDKFYKSHLLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYELL 543

Query: 541  LNNLDRDLQYAIKVEGKMDLESVSNYDEVKNAIMEKLLRLQEEPIREECPLIYHLDVAAM 600
            + NLDRDLQYAI+VEGKMDL+ +SNYDEVKN IMEKL+ L++EP+REECPLIYHLDVAAM
Sbjct: 544  IKNLDRDLQYAIRVEGKMDLDLISNYDEVKNVIMEKLVCLRDEPVREECPLIYHLDVAAM 603

Query: 601  YPNIILTNRLQPPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYYHLKKQI 660
            YPNIILTNRLQPPSIVTDE+CTACDFNRP KTCLRKLEWVWRGEIFM K+SDYYHLKKQI
Sbjct: 604  YPNIILTNRLQPPSIVTDEICTACDFNRPDKTCLRKLEWVWRGEIFMAKKSDYYHLKKQI 663

Query: 661  ESEFVDGTNGHLSKSFLDLPKMEQQSRLKDRLKKYCQKAYKRVLDKPVTELREAGICMRE 720
            ESEFVDGT+G  SKSFLDL KM+QQS+LK+RLKKYCQKAYKRVLDKPVTE+REAGICMRE
Sbjct: 664  ESEFVDGTDGQFSKSFLDLSKMDQQSKLKERLKKYCQKAYKRVLDKPVTEVREAGICMRE 723

Query: 721  NSFYVDTVRSFRDRRYEYKGLNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHKC 780
            NSFYVDTVRSFRDRRYEYKGLNKVWKGKLSEAKASGNSIKIQEA DMVVLYDSLQLAHKC
Sbjct: 724  NSFYVDTVRSFRDRRYEYKGLNKVWKGKLSEAKASGNSIKIQEAHDMVVLYDSLQLAHKC 783

Query: 781  ILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLPG 840
            ILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLL++KIGKPLELDTDGIWCVLPG
Sbjct: 784  ILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLVDKIGKPLELDTDGIWCVLPG 843

Query: 841  SFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEF 900
             FPENFTFKTKD KKKLTISYPCVMLNVDVARNNTN+QYQTLVDPV+KTY THSECSIEF
Sbjct: 844  CFPENFTFKTKDSKKKLTISYPCVMLNVDVARNNTNEQYQTLVDPVNKTYATHSECSIEF 903

Query: 901  EVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFD 960
            EVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFD
Sbjct: 904  EVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFD 963

Query: 961  KFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLADYGEQKS 1020
            KFLHGST+EECYSAVAAVANRWLDLLDNQGKDIADSEL+DYISESSTMSKSL+DYG+QKS
Sbjct: 964  KFLHGSTLEECYSAVAAVANRWLDLLDNQGKDIADSELLDYISESSTMSKSLSDYGQQKS 1023

Query: 1021 CAVTTARRLSDFLGDTMVKDKGLRCQYIVACEPQGTPVSERAVPVAIFETDAEIMKFYLR 1080
            CAVTTARRL+DFLGDTMVKDKGLRCQYIVACEP+GTPVSERAVPVAIFETD EIMKFYLR
Sbjct: 1024 CAVTTARRLADFLGDTMVKDKGLRCQYIVACEPRGTPVSERAVPVAIFETDPEIMKFYLR 1083

Query: 1081 KWCKTSSDVGIRSIVDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLYKKVRE 1140
            KWCKTSSDVGIRSI+DWSYYKQRL SAIQKI+TIPAAMQKV+NPVPRVVHPDWL++KVRE
Sbjct: 1084 KWCKTSSDVGIRSIIDWSYYKQRLGSAIQKIVTIPAAMQKVANPVPRVVHPDWLHRKVRE 1143

Query: 1141 KEDKFRQRKLVDIFSSLKKDDFLNKTCNAETNLMDE-NVEDLEDFPKKRRNSVNGPRPIV 1199
            KEDKFRQRKLVDIF+   +DD   K  +A     DE NV+DLEDF + + +S+N PRPIV
Sbjct: 1144 KEDKFRQRKLVDIFNLRSRDDLSRKMDDATITNHDEANVKDLEDF-QIKSSSINRPRPIV 1202

Query: 1200 RCFEVNNEQKTVKTTDQVDSLRQQLEPSEVSDQQPSSQNAIDTENIDRIVDYKGWLELKK 1259
            RC++V NE+++ K T Q++S  QQ +       QP   N    ENIDR VDY+GWLELKK
Sbjct: 1203 RCYDV-NEKRSAKKTGQLNSAEQQTDSVHELSSQP-QHNTSYAENIDRNVDYQGWLELKK 1260

Query: 1260 RKWKDNLDRRKKQKLGSLRASHQANGVSESLGDMINHKEAQRRTGVGSYFRRQETAMTRC 1319
            RKWKD LDRRKKQ+L + R SH     SE LG + NHK AQRRTGVGSYF   E A+TRC
Sbjct: 1261 RKWKDILDRRKKQRLNNTRTSHHITDASELLGGLTNHKGAQRRTGVGSYFTTHEVALTRC 1320

Query: 1320 HWQIIQLVPSSQSGVFLAWVVVEGIMVRIPITVPRLFYLNSKDPIVEKFPGRRVNKTLPH 1379
            HWQIIQL+PSS+ G F AWVVVEGIM++IPIT+PR FYLN+K P +E FPGRRV KTLPH
Sbjct: 1321 HWQIIQLLPSSRCGQFFAWVVVEGIMLKIPITIPRAFYLNAKAPAMENFPGRRVTKTLPH 1380

Query: 1380 GRRSFNLIEVMIDEDQFRKESKKLAALLADPEVE 1413
            GR S+NL+EV+IDED+FRKESKKLAALLADPEVE
Sbjct: 1381 GRPSYNLVEVIIDEDKFRKESKKLAALLADPEVE 1414



 Score =  970 bits (2508), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 462/619 (74%), Positives = 513/619 (82%), Gaps = 40/619 (6%)

Query: 1409 DPEVEVLGWQQNAAKIGMQRCAASSQWFNERISLARYAHI-------------------- 1448
            D + +VLGWQQ +AKIGMQR AASSQW NERISL+RYAH+                    
Sbjct: 1601 DSQYQVLGWQQASAKIGMQRSAASSQWLNERISLSRYAHVPLGNFELDWLIFTADVFFSR 1660

Query: 1449 --------LWISDDGVPDLGGTSEEDECFADEVHQPVLTYPGAYRKVSVELKIHHLSVNA 1500
                    LWISDDGVPDLGG  EE  CFADEV QPVLTYPGAYRKVSVELKIHHL+V+A
Sbjct: 1661 ALHDQQQVLWISDDGVPDLGGNHEESTCFADEVQQPVLTYPGAYRKVSVELKIHHLAVDA 1720

Query: 1501 LLKSNQVNEMEGGGLFGFDQDMNSGPYNNELCGFDETTSSAPAFRVVKQLIQRCLTDAVT 1560
            LLKSNQ+NEMEGG L GFDQDMNS     +  GFDE TSSA   RV+KQLIQRCL DAVT
Sbjct: 1721 LLKSNQINEMEGGALLGFDQDMNSSTTLYDQSGFDEATSSASGLRVLKQLIQRCLADAVT 1780

Query: 1561 SGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEFRKLGATIIFANF 1620
            SGNVFADAILQHLYRWLCSP SKLHDP LHRILHKVMQKVFA+LLAE RKLGATIIFANF
Sbjct: 1781 SGNVFADAILQHLYRWLCSPQSKLHDPALHRILHKVMQKVFALLLAELRKLGATIIFANF 1840

Query: 1621 SKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLFMDQYNYGGIPAR 1680
            SKVIIDTGKF+L+AAKAYCDS+LK LQ RELFEWIELEP+ FWHSLLFMDQYNYGGIPAR
Sbjct: 1841 SKVIIDTGKFELTAAKAYCDSVLKTLQNRELFEWIELEPLQFWHSLLFMDQYNYGGIPAR 1900

Query: 1681 ADESLDDD---------SQVDIVSSWNIAEYLPKEIQDHFVLVVSEFMYIPWKHAQKLAA 1731
             D+S  +D          +VDIVS+WNIAEYLPK+IQDHFVL+VSEFM+IPW +AQK AA
Sbjct: 1901 PDDSSHNDLHHHSPREEPKVDIVSNWNIAEYLPKKIQDHFVLIVSEFMFIPWDYAQKQAA 1960

Query: 1732 SRASLQEGSSCTPSITVAAAENFESHIVQYVKGEISSYFTGKLLSIVRDAIHHMKKMN-- 1789
            +R +L++G+SCTPSIT+ AAENFESH+V+Y+KG+I ++FT KLL I RD + HMK +N  
Sbjct: 1961 TREALRDGNSCTPSITIVAAENFESHMVEYIKGQIGTHFTDKLLGIARDTVLHMKGINKS 2020

Query: 1790 -NDQHNSPGVMQTAANIHKVDAPLEFIKHVCAAFALDQNVQHDVLVMRKNLLKYVRVREF 1848
             N Q  S G+ Q A   HK D  LEFIKHVCA  ALDQ+VQH+VLVMRKNLLKYVRVREF
Sbjct: 2021 ENGQQISLGIQQPAGMNHKGDPALEFIKHVCAVLALDQHVQHEVLVMRKNLLKYVRVREF 2080

Query: 1849 APEAEFRDPCPSFILPNVICSYCNDCRDLDLCRDMALLAQDWHCAMPQCGQPYDREVMEN 1908
            APEAEF DPCPSFILPNVICSYCNDCRDLDLCRD A+LA++W CA+PQCGQPYDREVMEN
Sbjct: 2081 APEAEFHDPCPSFILPNVICSYCNDCRDLDLCRDSAVLAEEWRCAVPQCGQPYDREVMEN 2140

Query: 1909 ALLQIVRQRERLYHLQDLVCIRCNQVKAAHLAEQCACAGSFRCKEDASDFRSKMQIFLNI 1968
            ALLQIVRQRERLYHLQDLVC+RCNQVKAAHL+EQC+CAGS+RC+ED S+FR KMQIFLN+
Sbjct: 2141 ALLQIVRQRERLYHLQDLVCLRCNQVKAAHLSEQCSCAGSYRCREDVSEFRRKMQIFLNV 2200

Query: 1969 ANRQGFQLLQECTSWILEV 1987
            A RQ FQLLQECTSWILEV
Sbjct: 2201 AIRQKFQLLQECTSWILEV 2219


>gi|255576345|ref|XP_002529065.1| DNA polymerase epsilon, catalytic subunit, putative [Ricinus
            communis]
 gi|223531477|gb|EEF33309.1| DNA polymerase epsilon, catalytic subunit, putative [Ricinus
            communis]
          Length = 2227

 Score = 2520 bits (6531), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 1208/1405 (85%), Positives = 1305/1405 (92%), Gaps = 6/1405 (0%)

Query: 14   TKKQKLIRSAEEELEAKLGYDLFSEGDKRLGWLLTFASSSLEDEDTRKVYSCIDLYFVSQ 73
            +KKQKLIR+AEEEL++KLG+DLF+EGDKRLGWLLTFASSS EDE+TR+V+SC+DLYFVSQ
Sbjct: 18   SKKQKLIRNAEEELDSKLGFDLFTEGDKRLGWLLTFASSSWEDEETRRVHSCVDLYFVSQ 77

Query: 74   DGSTFKSKYKFRPYFYAATKEKMEMDVEAYLRRRYESQIADIEILEKEDLDLKNHLSGLH 133
            DGS FKSK+KFRPYFYAATKEKMEMDVEAYLRRRYESQIADIEI+EKEDLDLKNHLSGL 
Sbjct: 78   DGSAFKSKFKFRPYFYAATKEKMEMDVEAYLRRRYESQIADIEIVEKEDLDLKNHLSGLR 137

Query: 134  KSYLKISFDTVQQLMDVKKDLLHVVERNQAKFDAAEAYESILTGKREQRPQDFLDCIVDL 193
            K YLKISF TVQQLMDVKKDL HVVERN+AKFD A+AYES+LTG+REQRPQDFLDCIVDL
Sbjct: 138  KRYLKISFSTVQQLMDVKKDLSHVVERNRAKFDTADAYESLLTGRREQRPQDFLDCIVDL 197

Query: 194  REYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLLEKRVDLLQRAEVHVCAFDIETTKLPL 253
            REYDVPYH+RFAIDND+RCGQWYDVS+SS+G +LE+R DLLQRAEV +CAFDIETTKLPL
Sbjct: 198  REYDVPYHVRFAIDNDIRCGQWYDVSVSSSGVMLERRTDLLQRAEVRICAFDIETTKLPL 257

Query: 254  KFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNVNNEIEL 313
            KFPDADYD+IMMISYM+DGQG+LIINRECVGEDIEDLEYTPKPEFEG FKVTNV NE+EL
Sbjct: 258  KFPDADYDLIMMISYMIDGQGFLIINRECVGEDIEDLEYTPKPEFEGCFKVTNVKNEVEL 317

Query: 314  LRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDKNQGECRAKFA 373
            L+ WFAHMQEVKPGIYVTYNGDYFDWPFLE+RAA+HG KMS+E+GF CDKNQGECRA+ A
Sbjct: 318  LKQWFAHMQEVKPGIYVTYNGDYFDWPFLESRAAYHGIKMSDEVGFSCDKNQGECRARSA 377

Query: 374  CHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQMMASYSVSD 433
            CHLDCFAWVKRDSYLPQGS GLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQ MASYSVSD
Sbjct: 378  CHLDCFAWVKRDSYLPQGSHGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQTMASYSVSD 437

Query: 434  AVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVICPNKHQS 493
            AVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVICPNKHQS
Sbjct: 438  AVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVICPNKHQS 497

Query: 494  DPEKFYRNHLLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQLLNNLDRDLQYAIK 553
            DPEKFY+NHLL+SETYIGGHVECLESGVFRSDLPT FKLDPSAY+QL+ NLDRDLQYAI 
Sbjct: 498  DPEKFYKNHLLDSETYIGGHVECLESGVFRSDLPTHFKLDPSAYDQLIGNLDRDLQYAII 557

Query: 554  VEGKMDLESVSNYDEVKNAIMEKLLRLQEEPIREECPLIYHLDVAAMYPNIILTNRLQPP 613
            VE KMDL+SVSNYDEVKNAIMEKL+ L++EP+REECPLIYHLDVAAMYPNIILTNRLQPP
Sbjct: 558  VESKMDLDSVSNYDEVKNAIMEKLVMLRDEPVREECPLIYHLDVAAMYPNIILTNRLQPP 617

Query: 614  SIVTDEVCTACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYYHLKKQIESEFVDGTNGHLS 673
            SIVTDE+CTACDFNRP KTCLRKLEWVWRGEIFM  +SDYYHLKKQIESEFVDG +G LS
Sbjct: 618  SIVTDEICTACDFNRPDKTCLRKLEWVWRGEIFMANKSDYYHLKKQIESEFVDGIDGQLS 677

Query: 674  KSFLDLPKMEQQSRLKDRLKKYCQKAYKRVLDKPVTELREAGICMRENSFYVDTVRSFRD 733
            K FLDLPK+EQQS+LK+RLKKYCQKAYKRV+DKPVTELREAGICMREN FYVDTVRSFRD
Sbjct: 678  KPFLDLPKVEQQSKLKERLKKYCQKAYKRVIDKPVTELREAGICMRENPFYVDTVRSFRD 737

Query: 734  RRYEYKGLNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHKCILNSFYGYVMRKG 793
            RRYEYKGLNK+WKGKLSEAK SGN IKIQEAQDMVVLYDSLQLAHKCILNSFYGYVMRKG
Sbjct: 738  RRYEYKGLNKLWKGKLSEAKTSGNPIKIQEAQDMVVLYDSLQLAHKCILNSFYGYVMRKG 797

Query: 794  ARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLPGSFPENFTFKTKDL 853
            ARWYSMEMAGVVTYTGAKIIQNARLL+EKIGKPLELDTDGIWCVLPGSFPENFTFKTKDL
Sbjct: 798  ARWYSMEMAGVVTYTGAKIIQNARLLVEKIGKPLELDTDGIWCVLPGSFPENFTFKTKDL 857

Query: 854  KKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEFEVDGPYKAMILPA 913
            KKKLTISYPCVMLNVDVARNNTN+QYQTLVDP++KTY THSECSIEFEVDGPYKAMILPA
Sbjct: 858  KKKLTISYPCVMLNVDVARNNTNEQYQTLVDPLNKTYATHSECSIEFEVDGPYKAMILPA 917

Query: 914  SKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFLHGSTIEECYS 973
            SKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFLHGST+E CYS
Sbjct: 918  SKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFLHGSTLEGCYS 977

Query: 974  AVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLADYGEQKSCAVTTARRLSDFL 1033
            AVAAVANRWLDLLDNQGKDIADSEL+DYISESSTMSKSL DYG+QKSCAVTTARRL+DFL
Sbjct: 978  AVAAVANRWLDLLDNQGKDIADSELLDYISESSTMSKSLVDYGQQKSCAVTTARRLADFL 1037

Query: 1034 GDTMVKDKGLRCQYIVACEPQGTPVSERAVPVAIFETDAEIMKFYLRKWCKTSSDVGIRS 1093
            GDTMVKDKGLRCQYIVACEP+GTPVSERAVPVAIFETDAEIMKFYLRKWCKTS+D+GIRS
Sbjct: 1038 GDTMVKDKGLRCQYIVACEPKGTPVSERAVPVAIFETDAEIMKFYLRKWCKTSTDIGIRS 1097

Query: 1094 IVDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLYKKVREKEDKFRQRKLVDI 1153
            I+DWSYYKQRLSSAIQKIITIPAAMQKV+NPVPRVVHPDWL+KKVREKEDKFRQRKLVDI
Sbjct: 1098 IIDWSYYKQRLSSAIQKIITIPAAMQKVANPVPRVVHPDWLHKKVREKEDKFRQRKLVDI 1157

Query: 1154 FSSLKKDDFLNKTCNAETN--LMD-ENVEDLEDFPKKRRNSVNGPRPIVRCFEVNNEQKT 1210
            F    K+DF+ K  +  T+  +MD ENVEDLEDF + +  S NGPRPIV C+  N+E+ +
Sbjct: 1158 FRLSSKEDFVRKNNDTITDNCMMDEENVEDLEDF-RNKSISTNGPRPIVHCYATNSEEHS 1216

Query: 1211 VKTTDQVDSLRQQLEPSEVSDQQPS--SQNAIDTENIDRIVDYKGWLELKKRKWKDNLDR 1268
            VK T ++DS  QQ +  E   +  S   Q A   E+IDR VDY+GWLELKKRKWKD L+R
Sbjct: 1217 VKATGRMDSSHQQTDNGESVHELSSLVQQTASSGESIDRNVDYQGWLELKKRKWKDTLER 1276

Query: 1269 RKKQKLGSLRASHQANGVSESLGDMINHKEAQRRTGVGSYFRRQETAMTRCHWQIIQLVP 1328
            RK+Q+LG+LR S  ANG  E L  +IN K+AQ RTGVGSYF   E A+TRCHWQIIQL P
Sbjct: 1277 RKRQRLGNLRNSSHANGDFEPLSSVINRKKAQSRTGVGSYFTTHEIALTRCHWQIIQLFP 1336

Query: 1329 SSQSGVFLAWVVVEGIMVRIPITVPRLFYLNSKDPIVEKFPGRRVNKTLPHGRRSFNLIE 1388
             S  G F AWVVVEGIM+++PITVPR+FYLNSK PI EKFPGRRVNKTLPHGR S+NL+E
Sbjct: 1337 GSHCGEFFAWVVVEGIMLKVPITVPRVFYLNSKAPITEKFPGRRVNKTLPHGRHSYNLVE 1396

Query: 1389 VMIDEDQFRKESKKLAALLADPEVE 1413
            V+IDED+F+KESKKLAALLADPEVE
Sbjct: 1397 VIIDEDKFKKESKKLAALLADPEVE 1421



 Score =  985 bits (2546), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 472/620 (76%), Positives = 518/620 (83%), Gaps = 40/620 (6%)

Query: 1409 DPEVEVLGWQQNAAKIGMQRCAASSQWFNERISLARYAHI-------------------- 1448
            D + +VLGWQQ AAK  MQR AASSQW NERI+L+RYAH+                    
Sbjct: 1608 DSQYQVLGWQQAAAKTAMQRSAASSQWLNERITLSRYAHVPLGNFELDWLIFTADVFISR 1667

Query: 1449 --------LWISDDGVPDLGGTSEEDECFADEVHQPVLTYPGAYRKVSVELKIHHLSVNA 1500
                    LWISDDGVPDLGG SEE  CFADEVHQP+LTYPGAYRKVSVELKIHHL+VNA
Sbjct: 1668 ALRDQQQLLWISDDGVPDLGGISEESSCFADEVHQPILTYPGAYRKVSVELKIHHLAVNA 1727

Query: 1501 LLKSNQVNEMEGGGLFGFDQDMNSGPYNNELCGFDETTSSAPAFRVVKQLIQRCLTDAVT 1560
            LLKS+QVNEMEGG L GFDQDM+SG +  E  G DE TSSAPA RV+KQLIQRCL DAVT
Sbjct: 1728 LLKSSQVNEMEGGALLGFDQDMSSGSHICEQYGVDEATSSAPALRVLKQLIQRCLADAVT 1787

Query: 1561 SGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEFRKLGATIIFANF 1620
            SG+VFADA+LQHLYRWLCSP SKLHDP LHR+LHKVMQKVFA+LLAEFRKLGATIIFANF
Sbjct: 1788 SGSVFADALLQHLYRWLCSPQSKLHDPALHRVLHKVMQKVFALLLAEFRKLGATIIFANF 1847

Query: 1621 SKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLFMDQYNYGGIPAR 1680
            SKVIIDTGKF LSAAKAYCDSLLK LQTRELFEWIELEP+ FWHSLLFMDQYNYGGIPAR
Sbjct: 1848 SKVIIDTGKFSLSAAKAYCDSLLKTLQTRELFEWIELEPLQFWHSLLFMDQYNYGGIPAR 1907

Query: 1681 ADE----------SLDDDSQVDIVSSWNIAEYLPKEIQDHFVLVVSEFMYIPWKHAQKLA 1730
            AD+          S   +SQVDIVSSWNIAEYLPK IQDHFVL+VSEFM+IPW++AQK  
Sbjct: 1908 ADDISHSESQGAHSQRQESQVDIVSSWNIAEYLPKTIQDHFVLIVSEFMFIPWEYAQKQD 1967

Query: 1731 ASRASLQEGSSCTPSITVAAAENFESHIVQYVKGEISSYFTGKLLSIVRDAIHHMKKMNN 1790
            A++ASLQ+ SSCTPSIT++AAE +ESHIV+Y+KG+IS+YFT KLL IVR+ + HMK +N 
Sbjct: 1968 ANKASLQDVSSCTPSITISAAETYESHIVEYLKGQISTYFTDKLLGIVRETVLHMKGINK 2027

Query: 1791 DQHNSP--GVMQTAANIHKVDAPLEFIKHVCAAFALDQNVQHDVLVMRKNLLKYVRVREF 1848
             +++ P  G  Q A NIHK    LEFIKHVCA  ALD NVQH+VLVMRKNLLKYVRVREF
Sbjct: 2028 SENDQPSSGFPQVAGNIHKRVPALEFIKHVCAVLALDLNVQHEVLVMRKNLLKYVRVREF 2087

Query: 1849 APEAEFRDPCPSFILPNVICSYCNDCRDLDLCRDMALLAQDWHCAMPQCGQPYDREVMEN 1908
            APEAEF DPCPSF+LPNVICSYCNDCRDLDLCRD ALLAQ+W CA+PQCGQPYDRE MEN
Sbjct: 2088 APEAEFHDPCPSFVLPNVICSYCNDCRDLDLCRDTALLAQEWRCAVPQCGQPYDREGMEN 2147

Query: 1909 ALLQIVRQRERLYHLQDLVCIRCNQVKAAHLAEQCACAGSFRCKEDASDFRSKMQIFLNI 1968
            ALLQIVRQRERLYHLQDLVCIRCNQVKAAHLAEQCACAG++RCKED S+FRSKMQIFLN+
Sbjct: 2148 ALLQIVRQRERLYHLQDLVCIRCNQVKAAHLAEQCACAGAYRCKEDVSEFRSKMQIFLNV 2207

Query: 1969 ANRQGFQLLQECTSWILEVQ 1988
            A  Q FQLLQECTSWILEV 
Sbjct: 2208 AISQKFQLLQECTSWILEVH 2227


>gi|359479378|ref|XP_002269920.2| PREDICTED: DNA polymerase epsilon catalytic subunit A [Vitis
            vinifera]
          Length = 2214

 Score = 2507 bits (6497), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 1197/1413 (84%), Positives = 1297/1413 (91%), Gaps = 4/1413 (0%)

Query: 4    RRWDRQDGRRTKKQKLIRSAEEELEAKLGYDLFSEGDKRLGWLLTFASSSLEDEDTRKVY 63
            RR DR D  + KKQKLIR+AEEE+E+KLG DLFSEG+KRLGWLLTFASSS EDE+T KVY
Sbjct: 6    RRRDRADVWKHKKQKLIRNAEEEVESKLGLDLFSEGEKRLGWLLTFASSSWEDEETHKVY 65

Query: 64   SCIDLYFVSQDGSTFKSKYKFRPYFYAATKEKMEMDVEAYLRRRYESQIADIEILEKEDL 123
            SC+DLYFVSQDGS+FKSKYKFRPYFYAATK+KMEMDVEAYLRRRYE QIADIEI+ KEDL
Sbjct: 66   SCVDLYFVSQDGSSFKSKYKFRPYFYAATKDKMEMDVEAYLRRRYEGQIADIEIMYKEDL 125

Query: 124  DLKNHLSGLHKSYLKISFDTVQQLMDVKKDLLHVVERNQAKFDAAEAYESILTGKREQRP 183
            DLKNHLSGL KSYLKISFD VQQLM VK DLLHVVERN+AKFDAAEAYESILTGK +QR 
Sbjct: 126  DLKNHLSGLCKSYLKISFDNVQQLMHVKSDLLHVVERNRAKFDAAEAYESILTGKSKQRT 185

Query: 184  QDFLDCIVDLREYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLLEKRVDLLQRAEVHVCA 243
            QDF+D IVDLREYDVPYH+RFAID DVRCGQWYDV++SS G +LE+R DLLQRAEVHVCA
Sbjct: 186  QDFIDYIVDLREYDVPYHVRFAIDKDVRCGQWYDVNVSSAGVMLERRTDLLQRAEVHVCA 245

Query: 244  FDIETTKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFK 303
            FDIETTKLPLKFPDA+YD++MMISYM+DGQGYLIINRECVGEDIE+LEYTPKPEFEG FK
Sbjct: 246  FDIETTKLPLKFPDAEYDLVMMISYMVDGQGYLIINRECVGEDIEELEYTPKPEFEGCFK 305

Query: 304  VTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDK 363
            VTNV NE ELLR+WFAHM+EVKPGIYVTYNGD+FDWPFLE+RAAHHG KMS+E+GFQCDK
Sbjct: 306  VTNVKNEKELLRMWFAHMREVKPGIYVTYNGDFFDWPFLESRAAHHGLKMSDEVGFQCDK 365

Query: 364  NQGECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKP 423
            NQGECRAKF+CHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKE P
Sbjct: 366  NQGECRAKFSCHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKELP 425

Query: 424  QMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKA 483
            QMMASYSVSDAV+TYYLYMTYVHPFIFSLATIIPM PDEVLRKGSGTLCEMLLMVQAYKA
Sbjct: 426  QMMASYSVSDAVSTYYLYMTYVHPFIFSLATIIPMPPDEVLRKGSGTLCEMLLMVQAYKA 485

Query: 484  NVICPNKHQSDPEKFYRNHLLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQLLNN 543
            NVICPNKHQSDPEKFY N LLESETYIGGHVECLESGVFRSDLPTSFKLDPS+YEQL+ N
Sbjct: 486  NVICPNKHQSDPEKFYHNQLLESETYIGGHVECLESGVFRSDLPTSFKLDPSSYEQLIVN 545

Query: 544  LDRDLQYAIKVEGKMDLESVSNYDEVKNAIMEKLLRLQEEPIREECPLIYHLDVAAMYPN 603
            LDRDLQYAI+VEGKMD+ESVSNYDEVKNAI EKL++LQ EPIREE PLIYHLDVAAMYPN
Sbjct: 546  LDRDLQYAIRVEGKMDVESVSNYDEVKNAIKEKLMKLQGEPIREEFPLIYHLDVAAMYPN 605

Query: 604  IILTNRLQPPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYYHLKKQIESE 663
            IILTNRLQP SIV+DE+CTACDFNRPGK CLRKLEWVWRGE FM K+SDYYHLK+QIESE
Sbjct: 606  IILTNRLQPSSIVSDEICTACDFNRPGKNCLRKLEWVWRGEAFMAKKSDYYHLKRQIESE 665

Query: 664  FVDGTNGHLSKSFLDLPKMEQQSRLKDRLKKYCQKAYKRVLDKPVTELREAGICMRENSF 723
             VDG +   SKSF+DLPK EQQ +LK+RLKKYCQKAYKRVLDKP TELREAGICMRENSF
Sbjct: 666  LVDGGDSRFSKSFIDLPKTEQQLKLKERLKKYCQKAYKRVLDKPATELREAGICMRENSF 725

Query: 724  YVDTVRSFRDRRYEYKGLNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHKCILN 783
            Y+DTVRSFRDRRYEYKGLNKVWKGKLSEAKASGNSI+IQEAQDMVVLYDSLQLAHKCILN
Sbjct: 726  YIDTVRSFRDRRYEYKGLNKVWKGKLSEAKASGNSIRIQEAQDMVVLYDSLQLAHKCILN 785

Query: 784  SFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLPGSFP 843
            SFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIG+PLELDTDGIWCVLPGSFP
Sbjct: 786  SFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGRPLELDTDGIWCVLPGSFP 845

Query: 844  ENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEFEVD 903
            ENFTF+TKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDP++KTY THSECSIEFEVD
Sbjct: 846  ENFTFRTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPINKTYATHSECSIEFEVD 905

Query: 904  GPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFL 963
            GPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFL
Sbjct: 906  GPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFL 965

Query: 964  HGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLADYGEQKSCAV 1023
            HGST+EECY+AVA+VANRWLDLLDNQGKDI DSEL+DYISESSTMSKSLADYGEQKSCAV
Sbjct: 966  HGSTLEECYAAVASVANRWLDLLDNQGKDIVDSELLDYISESSTMSKSLADYGEQKSCAV 1025

Query: 1024 TTARRLSDFLGDTMVKDKGLRCQYIVACEPQGTPVSERAVPVAIFETDAEIMKFYLRKWC 1083
            TTARRL+DFLGDTMVKDKGLRCQYIVACEP+GTPVSERAVPVAIFETDAEIMKFY+RKWC
Sbjct: 1026 TTARRLADFLGDTMVKDKGLRCQYIVACEPRGTPVSERAVPVAIFETDAEIMKFYVRKWC 1085

Query: 1084 KTSSDVGIRSIVDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLYKKVREKED 1143
            K SSDVGIRSIVDWSYYKQRL SAIQKIITIPAAMQKV+NPVPRVVHPDWLYKKVREKE+
Sbjct: 1086 KISSDVGIRSIVDWSYYKQRLGSAIQKIITIPAAMQKVANPVPRVVHPDWLYKKVREKEE 1145

Query: 1144 KFRQRKLVDIFSSLKKDDFLNKTCNAETN---LMDENVEDLEDFPKKRRNSVNGPRPIVR 1200
            KFRQRKLVD+F SLK+DD +    +A T+   + +EN+EDLEDF  K R S  GPRPIVR
Sbjct: 1146 KFRQRKLVDMFGSLKRDDNVKMNVDAITSNHVISEENIEDLEDFRNKGRTSSAGPRPIVR 1205

Query: 1201 CFEVNNEQKTVKTTDQVDSLRQQLEPSEVSDQQPSSQNAIDTENIDRIVDYKGWLELKKR 1260
            C+EVN +Q++       +S ++    SE S   P     I T+NIDR VDY+GWLE+KKR
Sbjct: 1206 CYEVNGKQQSDAMNCLANSPQEPANHSE-SALTPMQPTDISTDNIDRNVDYQGWLEMKKR 1264

Query: 1261 KWKDNLDRRKKQKLGSLRASHQANGVSESLGDMINHKEAQRRTGVGSYFRRQETAMTRCH 1320
            KWKD  ++RK+Q++ + + S+Q NGVSE  G +INHK+AQ RTGV SYFRR E A+T  +
Sbjct: 1265 KWKDAREKRKRQRMDNSKTSNQTNGVSELPGGVINHKQAQGRTGVNSYFRRHELALTHSY 1324

Query: 1321 WQIIQLVPSSQSGVFLAWVVVEGIMVRIPITVPRLFYLNSKDPIVEKFPGRRVNKTLPHG 1380
            WQIIQL PSSQ G F AWV+VEG+M++IPITVPR+FYLNSK  I E+FPGRRVNKTLPHG
Sbjct: 1325 WQIIQLAPSSQHGQFFAWVIVEGVMLKIPITVPRVFYLNSKALITEEFPGRRVNKTLPHG 1384

Query: 1381 RRSFNLIEVMIDEDQFRKESKKLAALLADPEVE 1413
              S+NLIE++IDEDQFR ES+KLAA LADPEVE
Sbjct: 1385 HHSYNLIEIIIDEDQFRGESRKLAAHLADPEVE 1417



 Score =  960 bits (2482), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 465/624 (74%), Positives = 509/624 (81%), Gaps = 57/624 (9%)

Query: 1409 DPEVEVLGWQQNAAKIGMQRCAASSQWFNERISLARYAHI-------------------- 1448
            D   + LGWQ  AAKIGMQRCAA++QW NERISLARYAH+                    
Sbjct: 1604 DSHYQALGWQIVAAKIGMQRCAAATQWLNERISLARYAHVPLGNFEPDWLIFTADLFFSR 1663

Query: 1449 --------LWISDDGVPDLGGTSEEDECFADEVHQPVLTYPGAYRKVSVELKIHHLSVNA 1500
                    LWISD+G+PDLGG +EED CFADEVHQPVLTYPGAYRKVSVELKIHHL+VNA
Sbjct: 1664 ALRDQQQVLWISDNGIPDLGGLNEEDTCFADEVHQPVLTYPGAYRKVSVELKIHHLAVNA 1723

Query: 1501 LLKSNQVNEMEGGGLFGFDQDMNSGPYN-NELCGFDETTSSAPAFRVVKQLIQRCLTDAV 1559
            LLKSNQVNEMEGG LFGF+QDMN G +  NE CGFDE T  AP FRV+KQLIQRCL DAV
Sbjct: 1724 LLKSNQVNEMEGGALFGFEQDMNMGAHGFNEQCGFDEATLCAPTFRVLKQLIQRCLADAV 1783

Query: 1560 TSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEFRKLGATIIFAN 1619
            +SGNVFADAILQHLYRWL SP SKLHDP LHRILHKVMQKVFA+LLAEFRKLGATI+FAN
Sbjct: 1784 SSGNVFADAILQHLYRWLYSPQSKLHDPALHRILHKVMQKVFALLLAEFRKLGATIVFAN 1843

Query: 1620 FSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLFMDQYNYGGIPA 1679
            FSKVIIDTGK DLSAAKAYCDSLLK LQTR+LFEWIE+EP+HFWHSLLFMDQYNYGG+ A
Sbjct: 1844 FSKVIIDTGKSDLSAAKAYCDSLLKTLQTRDLFEWIEIEPLHFWHSLLFMDQYNYGGVQA 1903

Query: 1680 RA------------DESLDDDSQVDIVSSWNIAEYLPKEIQDHFVLVVSEFMYIPWKHAQ 1727
            R+             ES++D+SQVDIVSSWNIAE LPK IQDHFVL+VSEFMY PWK+A+
Sbjct: 1904 RSHGGSLIGSSDPTSESIEDESQVDIVSSWNIAEQLPKTIQDHFVLIVSEFMYTPWKYAR 1963

Query: 1728 KLAASRASLQEGSSCTPSITVAAAENFESHIVQYVKGEISSYFTGKLLSIVRDAIHHMKK 1787
            + AA+RAS + G SCTPSIT AAAE FESHI +Y+K +ISSYF  KLL IVRD + HMK 
Sbjct: 1964 EQAANRASARNGDSCTPSITAAAAEVFESHITEYLKEQISSYFADKLLRIVRDTVLHMKG 2023

Query: 1788 MN---NDQHNSPGVMQTAANIHKVDAPLEFIKHVCAAFALDQNVQHDVLVMRKNLLKYVR 1844
            MN   NDQH               DA LEFIKHVCA  ALDQNVQHD+LVMRKNLLKYV 
Sbjct: 2024 MNRSENDQHTG-------------DAALEFIKHVCAVLALDQNVQHDILVMRKNLLKYVH 2070

Query: 1845 VREFAPEAEFRDPCPSFILPNVICSYCNDCRDLDLCRDMALLAQDWHCAMPQCGQPYDRE 1904
            VREFAPEAEF DPC SFILPNVICSYCNDCRDLDLCRD ALLAQ+W CA+PQCGQPYDRE
Sbjct: 2071 VREFAPEAEFCDPCQSFILPNVICSYCNDCRDLDLCRDSALLAQEWRCAVPQCGQPYDRE 2130

Query: 1905 VMENALLQIVRQRERLYHLQDLVCIRCNQVKAAHLAEQCACAGSFRCKEDASDFRSKMQI 1964
            VMENALLQIVRQRERLYH+QDLVC++CNQVKAAHLAEQC+CAGSFRCKED S+F+SKMQ+
Sbjct: 2131 VMENALLQIVRQRERLYHVQDLVCLKCNQVKAAHLAEQCSCAGSFRCKEDVSEFQSKMQV 2190

Query: 1965 FLNIANRQGFQLLQECTSWILEVQ 1988
            FL IA  Q FQLLQECTSWILE++
Sbjct: 2191 FLKIAMLQKFQLLQECTSWILEIR 2214


>gi|449496326|ref|XP_004160105.1| PREDICTED: DNA polymerase epsilon catalytic subunit A-like, partial
            [Cucumis sativus]
          Length = 2051

 Score = 2463 bits (6384), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 1165/1414 (82%), Positives = 1294/1414 (91%), Gaps = 10/1414 (0%)

Query: 3    RRRWDRQDGRRTKKQKLIRSAEEELEAKLGYDLFSEGDKRLGWLLTFASSSLEDEDTRKV 62
            RRR   +   R+KKQ++IRSAEEE+E+KLG+DLFSEGDKRLGWLLTFA SSLED+DT KV
Sbjct: 6    RRRGRAEKSSRSKKQRVIRSAEEEIESKLGFDLFSEGDKRLGWLLTFAPSSLEDQDTGKV 65

Query: 63   YSCIDLYFVSQDGSTFKSKYKFRPYFYAATKEKMEMDVEAYLRRRYESQIADIEILEKED 122
            YSCIDLYFV+QDGS+FKSKYKFRPYFYAATK+KME DVEAYLRRRYE +IADIEIL+KED
Sbjct: 66   YSCIDLYFVTQDGSSFKSKYKFRPYFYAATKDKMETDVEAYLRRRYEGRIADIEILQKED 125

Query: 123  LDLKNHLSGLHKSYLKISFDTVQQLMDVKKDLLHVVERNQAKFDAAEAYESILTGKREQR 182
            LDLKNHLSGL K+YLK+SFDTVQ+LM+VK +L+HVVE N AK DAAEAY+SIL GKREQ+
Sbjct: 126  LDLKNHLSGLRKTYLKLSFDTVQELMNVKSELVHVVENNWAKSDAAEAYDSILFGKREQK 185

Query: 183  PQDFLDCIVDLREYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLLEKRVDLLQRAEVHVC 242
            PQDFL+CI+DLREYDVPYH+RFAID+D+RCGQWYDVS+SSTG  LEKR DLLQRAEVH+C
Sbjct: 186  PQDFLECIIDLREYDVPYHVRFAIDHDLRCGQWYDVSVSSTGVTLEKRKDLLQRAEVHIC 245

Query: 243  AFDIETTKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYF 302
            AFDIETTKLPLKFPDA+YD+IMMISYM+DG GYLIINRECVGEDIE+LEYTPKPEFEG+F
Sbjct: 246  AFDIETTKLPLKFPDAEYDMIMMISYMVDGNGYLIINRECVGEDIENLEYTPKPEFEGFF 305

Query: 303  KVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCD 362
            KVTNV NE+ELL+LWF+HM+EVKPGIYVTYNGD+FDWPF+ETRAA+HGFKMS+E+GFQCD
Sbjct: 306  KVTNVKNELELLKLWFSHMREVKPGIYVTYNGDFFDWPFIETRAAYHGFKMSDEVGFQCD 365

Query: 363  KNQGECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEK 422
            KNQGECR+KFACHLDCFAWVKRDSYLPQGS GLKAVTKAKLGYDPLEVNPEDMVRFA EK
Sbjct: 366  KNQGECRSKFACHLDCFAWVKRDSYLPQGSHGLKAVTKAKLGYDPLEVNPEDMVRFAMEK 425

Query: 423  PQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYK 482
            PQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYK
Sbjct: 426  PQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYK 485

Query: 483  ANVICPNKHQSDPEKFYRNHLLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQLLN 542
            ANV+CPNKHQSDPEKFY N LLESETYIGGHVECLESGVFRSDLPTSF+LDPSAY+QL+N
Sbjct: 486  ANVVCPNKHQSDPEKFYSNRLLESETYIGGHVECLESGVFRSDLPTSFRLDPSAYDQLIN 545

Query: 543  NLDRDLQYAIKVEGKMDLESVSNYDEVKNAIMEKLLRLQEEPIREECPLIYHLDVAAMYP 602
            NLDRDLQYAI+VEGKM+LESVSNY +VKNAIMEKL+RL++EP+REE PLIYHLDVAAMYP
Sbjct: 546  NLDRDLQYAIQVEGKMELESVSNYSDVKNAIMEKLIRLRDEPVREEGPLIYHLDVAAMYP 605

Query: 603  NIILTNRLQPPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYYHLKKQIES 662
            NIILTNRLQP SIVTDEVCTACDFNRPGKTCLRKLEWVWRGE+FM K+SDYYHLKKQIES
Sbjct: 606  NIILTNRLQPSSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEVFMAKKSDYYHLKKQIES 665

Query: 663  EFVDGTNGHLSKSFLDLPKMEQQSRLKDRLKKYCQKAYKRVLDKPVTELREAGICMRENS 722
            EFVD  N   SKSFL+LPK+EQQ++LKDRLKKYCQKAYKRVLDKPVTE+REAGICMRENS
Sbjct: 666  EFVDSGNVRSSKSFLELPKLEQQAKLKDRLKKYCQKAYKRVLDKPVTEVREAGICMRENS 725

Query: 723  FYVDTVRSFRDRRYEYKGLNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHKCIL 782
            FY+DTVRSFRDRRYEYKGLNKVWKGKL+EAK+SGNSIKIQEAQDMVVLYDSLQLAHKCIL
Sbjct: 726  FYIDTVRSFRDRRYEYKGLNKVWKGKLTEAKSSGNSIKIQEAQDMVVLYDSLQLAHKCIL 785

Query: 783  NSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLPGSF 842
            NSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWC LPGSF
Sbjct: 786  NSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCALPGSF 845

Query: 843  PENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEFEV 902
            PENFTFKT+D  KKLTISYPCVMLNVDVARNNTNDQYQTL+DPV KTY+THSECSIEFEV
Sbjct: 846  PENFTFKTRD-SKKLTISYPCVMLNVDVARNNTNDQYQTLIDPVKKTYKTHSECSIEFEV 904

Query: 903  DGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKF 962
            DGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKF
Sbjct: 905  DGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKF 964

Query: 963  LHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLADYGEQKSCA 1022
            LHGST+EECYS VA+VANRWLDLLDNQGKDIADSEL+DYISESSTMSKSL DYGEQKSCA
Sbjct: 965  LHGSTLEECYSVVASVANRWLDLLDNQGKDIADSELLDYISESSTMSKSLVDYGEQKSCA 1024

Query: 1023 VTTARRLSDFLGDTMVKDKGLRCQYIVACEPQGTPVSERAVPVAIFETDAEIMKFYLRKW 1082
            VTTARRL+DFLGDTMV+DKGLRCQYIVACEP+GTPVSERA+PVAIFETDAEIMKFY+RKW
Sbjct: 1025 VTTARRLADFLGDTMVRDKGLRCQYIVACEPKGTPVSERALPVAIFETDAEIMKFYVRKW 1084

Query: 1083 CKTSSDVGIRSIVDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLYKKVREKE 1142
            CK SS+VGIRSI+DWSYYKQRLSSAIQKIITIPAAMQKV+NPVPRVVHPDWL+KKVREK+
Sbjct: 1085 CKISSEVGIRSIIDWSYYKQRLSSAIQKIITIPAAMQKVANPVPRVVHPDWLHKKVREKD 1144

Query: 1143 DKFRQRKLVDIFSSLKKDDFLNKTCNAETN---LMDENVEDLEDFPKKRRNSVNGPRPIV 1199
            DKFRQ+K+ D+F+S  +  +  K  +       + ++N EDLEDF +K+ +S NGP+P+V
Sbjct: 1145 DKFRQQKVADMFASSSRVKYSKKNSDVSCTKHAVDEDNSEDLEDF-QKKTSSTNGPKPVV 1203

Query: 1200 RCFEVNNEQKTVKTTDQVDSLRQQLEPSEVSDQQPSSQNAIDTENIDRIVDYKGWLELKK 1259
            RC++V  ++ ++ +  + +S  Q+     ++D      + +D ENID+ VDY GWLELKK
Sbjct: 1204 RCYDVKGKKHSLTSDIETNSEMQE----NLNDGGFEPSSPVDVENIDKNVDYSGWLELKK 1259

Query: 1260 RKWKDNLDRRKKQKLGSLRASHQANGVSESLGDMINHKEAQRRTGVGSYFRRQETAMTRC 1319
            RKWKD LDRRKKQ+L + R    AN V+  L    N+K+A  RTGVGSYF+R E ++TRC
Sbjct: 1260 RKWKDTLDRRKKQRLVNSRTPLAANNVTRELNGATNNKDAP-RTGVGSYFKRHEGSVTRC 1318

Query: 1320 HWQIIQLVPSSQSGVFLAWVVVEGIMVRIPITVPRLFYLNSKDPIVEKFPGRRVNKTLPH 1379
            HWQI+QLV S QSG + AW VVEG+M++IPI VPR+FYLNSK PI ++F GRRVNKTLPH
Sbjct: 1319 HWQILQLVQSPQSGQYFAWAVVEGVMLKIPINVPRVFYLNSKAPITDEFVGRRVNKTLPH 1378

Query: 1380 GRRSFNLIEVMIDEDQFRKESKKLAALLADPEVE 1413
            GR S+NL EV+ DE QFR +  KLAALLADPEVE
Sbjct: 1379 GRHSYNLYEVVTDEGQFRTQRNKLAALLADPEVE 1412



 Score =  652 bits (1682), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 314/455 (69%), Positives = 365/455 (80%), Gaps = 32/455 (7%)

Query: 1409 DPEVEVLGWQQNAAKIGMQRCAASSQWFNERISLARYAHI-------------------- 1448
            D + +VLGWQQ AAKIGMQRCAASSQW NERISLARYAH+                    
Sbjct: 1599 DNQYQVLGWQQTAAKIGMQRCAASSQWLNERISLARYAHVPLGNFELDWLIFTADIFFSR 1658

Query: 1449 --------LWISDDGVPDLGGTSEEDECFADEVHQPVLTYPGAYRKVSVELKIHHLSVNA 1500
                    LWISDDGVPD+GG + ED CFADEV QP+LTYPGAYRKVSVELKIHHL+VNA
Sbjct: 1659 ALHDQQQVLWISDDGVPDIGGINIEDVCFADEVQQPILTYPGAYRKVSVELKIHHLAVNA 1718

Query: 1501 LLKSNQVNEMEGGGLFGFDQDMNSGP-YNNELCGFDETTSSAPAFRVVKQLIQRCLTDAV 1559
            LLKSNQVNEMEGG LFGF++D+  G  ++NE  GFDE  S APAFRV+KQLIQRCLTDAV
Sbjct: 1719 LLKSNQVNEMEGGSLFGFERDIQCGAQFSNEEGGFDEAASCAPAFRVLKQLIQRCLTDAV 1778

Query: 1560 TSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEFRKLGATIIFAN 1619
            TSGNV+ADAILQHLYRW+CSP SKLHDP LHR+ HKVMQKVFA+LLAE RKLGATIIFAN
Sbjct: 1779 TSGNVYADAILQHLYRWICSPQSKLHDPALHRLFHKVMQKVFALLLAELRKLGATIIFAN 1838

Query: 1620 FSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLFMDQYNYGGIPA 1679
            FS++IIDTG+FDLS+AKAYCDSLLK ++TR+LFEWIELEP+ FW SLLFMD+YNYGGI A
Sbjct: 1839 FSRIIIDTGRFDLSSAKAYCDSLLKTVKTRDLFEWIELEPLQFWQSLLFMDKYNYGGIRA 1898

Query: 1680 RADESLDDDSQVDIVSSWNIAEYLPKEIQDHFVLVVSEFMYIPWKHAQKLAASRASLQEG 1739
            + DES D +SQVDIV++WNIAEYLPK+IQDHF  ++S+F+YIPW +A K AA+RASLQ  
Sbjct: 1899 KDDESTDVESQVDIVANWNIAEYLPKKIQDHFDFIISQFLYIPWDYATKQAAARASLQRD 1958

Query: 1740 SSCTPSITVAAAENFESHIVQYVKGEISSYFTGKLLSIVRDAIHHMK-KMNNDQHNSPGV 1798
             +CTPSITV AAE+FESH+ +++K ++SSYF+ K+L IVRD + HMK K  N Q   P  
Sbjct: 1959 DTCTPSITVLAAESFESHVTEHLKEQLSSYFSDKMLGIVRDIVLHMKGKEKNTQDGLPE- 2017

Query: 1799 MQTAANIHKVDAPLEFIKHVCAAFALDQNVQHDVL 1833
             Q   NI+K DA LEFIK VC+  A+DQNVQHDVL
Sbjct: 2018 -QPPGNIYKGDAALEFIKLVCSVLAIDQNVQHDVL 2051


>gi|449456122|ref|XP_004145799.1| PREDICTED: DNA polymerase epsilon catalytic subunit A-like [Cucumis
            sativus]
          Length = 2206

 Score = 2462 bits (6381), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 1166/1414 (82%), Positives = 1293/1414 (91%), Gaps = 10/1414 (0%)

Query: 3    RRRWDRQDGRRTKKQKLIRSAEEELEAKLGYDLFSEGDKRLGWLLTFASSSLEDEDTRKV 62
            RRR   +   R+KKQ++IRSAEEE+E+KLG+DLFSEGDKRLGWLLTFA SSLED+DT KV
Sbjct: 6    RRRGRAEKSSRSKKQRVIRSAEEEIESKLGFDLFSEGDKRLGWLLTFAPSSLEDQDTGKV 65

Query: 63   YSCIDLYFVSQDGSTFKSKYKFRPYFYAATKEKMEMDVEAYLRRRYESQIADIEILEKED 122
            YSCIDLYFV+QDGS+FKSKYKFRPYFYAATK+KME DVEAYLRRRYE +IADIEIL+KED
Sbjct: 66   YSCIDLYFVTQDGSSFKSKYKFRPYFYAATKDKMETDVEAYLRRRYEGRIADIEILQKED 125

Query: 123  LDLKNHLSGLHKSYLKISFDTVQQLMDVKKDLLHVVERNQAKFDAAEAYESILTGKREQR 182
            LDLKNHLSGL K+YLK+SFDTVQ+LM+VK +L+HVVE N AK DAAEAY+SIL GKREQ+
Sbjct: 126  LDLKNHLSGLRKTYLKLSFDTVQELMNVKSELVHVVENNWAKSDAAEAYDSILFGKREQK 185

Query: 183  PQDFLDCIVDLREYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLLEKRVDLLQRAEVHVC 242
            PQDFL+CI+DLREYDVPYH+RFAID+D+RCGQWYDVS+SSTG  LEKR DLLQRAEVH+C
Sbjct: 186  PQDFLECIIDLREYDVPYHVRFAIDHDLRCGQWYDVSVSSTGVTLEKRKDLLQRAEVHIC 245

Query: 243  AFDIETTKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYF 302
            AFDIETTKLPLKFPDA+YD+IMMISYM+DG GYLIINRECVGEDIE+LEYTPKPEFEG+F
Sbjct: 246  AFDIETTKLPLKFPDAEYDMIMMISYMVDGNGYLIINRECVGEDIENLEYTPKPEFEGFF 305

Query: 303  KVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCD 362
            KVTNV NE+ELL+LWF+HM+EVKPGIYVTYNGD+FDWPF+ETRAA+HGFKMS+E+GFQCD
Sbjct: 306  KVTNVKNELELLKLWFSHMREVKPGIYVTYNGDFFDWPFIETRAAYHGFKMSDEVGFQCD 365

Query: 363  KNQGECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEK 422
            KNQGECR+KFACHLDCFAWVKRDSYLPQGS GLKAVTKAKLGYDPLEVNPEDMVRFA EK
Sbjct: 366  KNQGECRSKFACHLDCFAWVKRDSYLPQGSHGLKAVTKAKLGYDPLEVNPEDMVRFAMEK 425

Query: 423  PQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYK 482
            PQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYK
Sbjct: 426  PQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYK 485

Query: 483  ANVICPNKHQSDPEKFYRNHLLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQLLN 542
            ANV+CPNKHQSDPEKFY N LLESETYIGGHVECLESGVFRSDLPTSF+LDPSAY+QL+N
Sbjct: 486  ANVVCPNKHQSDPEKFYSNRLLESETYIGGHVECLESGVFRSDLPTSFRLDPSAYDQLIN 545

Query: 543  NLDRDLQYAIKVEGKMDLESVSNYDEVKNAIMEKLLRLQEEPIREECPLIYHLDVAAMYP 602
            NLDRDLQYAI+VEGKM+LESVSNY +VKNAIMEKL+RL++EP+REE PLIYHLDVAAMYP
Sbjct: 546  NLDRDLQYAIQVEGKMELESVSNYSDVKNAIMEKLIRLRDEPVREEGPLIYHLDVAAMYP 605

Query: 603  NIILTNRLQPPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYYHLKKQIES 662
            NIILTNRLQP SIVTDEVCTACDFNRPGKTCLRKLEWVWRGE+FM K+SDYYHLKKQIES
Sbjct: 606  NIILTNRLQPSSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEVFMAKKSDYYHLKKQIES 665

Query: 663  EFVDGTNGHLSKSFLDLPKMEQQSRLKDRLKKYCQKAYKRVLDKPVTELREAGICMRENS 722
            EFVD  N   SKSFL+LPK+EQQ++LKDRLKKYCQKAYKRVLDKPVTE+REAGICMRENS
Sbjct: 666  EFVDSGNVRSSKSFLELPKLEQQAKLKDRLKKYCQKAYKRVLDKPVTEVREAGICMRENS 725

Query: 723  FYVDTVRSFRDRRYEYKGLNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHKCIL 782
            FY+DTVRSFRDRRYEYKGLNKVWKGKL+EAK+SGNSIKIQEAQDMVVLYDSLQLAHKCIL
Sbjct: 726  FYIDTVRSFRDRRYEYKGLNKVWKGKLTEAKSSGNSIKIQEAQDMVVLYDSLQLAHKCIL 785

Query: 783  NSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLPGSF 842
            NSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWC LPGSF
Sbjct: 786  NSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCALPGSF 845

Query: 843  PENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEFEV 902
            PENFTFKT+D  KKLTISYPCVMLNVDVARNNTNDQYQTL+DPV KTY+THSECSIEFEV
Sbjct: 846  PENFTFKTRD-SKKLTISYPCVMLNVDVARNNTNDQYQTLIDPVKKTYKTHSECSIEFEV 904

Query: 903  DGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKF 962
            DGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKF
Sbjct: 905  DGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKF 964

Query: 963  LHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLADYGEQKSCA 1022
            LHGST+EECYS VA+VANRWLDLLDNQGKDIADSEL+DYISESSTMSKSL DYGEQKSCA
Sbjct: 965  LHGSTLEECYSVVASVANRWLDLLDNQGKDIADSELLDYISESSTMSKSLVDYGEQKSCA 1024

Query: 1023 VTTARRLSDFLGDTMVKDKGLRCQYIVACEPQGTPVSERAVPVAIFETDAEIMKFYLRKW 1082
            VTTARRL+DFLGDTMV+DKGLRCQYIVACEP+GTPVSERA+PVAIFETDAEIMKFY+RKW
Sbjct: 1025 VTTARRLADFLGDTMVRDKGLRCQYIVACEPKGTPVSERALPVAIFETDAEIMKFYVRKW 1084

Query: 1083 CKTSSDVGIRSIVDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLYKKVREKE 1142
            CK SS+VGIRSI+DWSYYKQRLSSAIQKIITIPAAMQKV+NPVPRVVHPDWL+KKVREK+
Sbjct: 1085 CKISSEVGIRSIIDWSYYKQRLSSAIQKIITIPAAMQKVANPVPRVVHPDWLHKKVREKD 1144

Query: 1143 DKFRQRKLVDIFSSLKKDDFLNKTCNAETN---LMDENVEDLEDFPKKRRNSVNGPRPIV 1199
            DKFRQ+K+ D+F+S  +  +  K  +   +   + ++N EDLEDF KK  +S NGP+P+V
Sbjct: 1145 DKFRQQKVADMFASSSRVKYSKKNSDVSCSKHAVDEDNSEDLEDFQKK-TSSTNGPKPVV 1203

Query: 1200 RCFEVNNEQKTVKTTDQVDSLRQQLEPSEVSDQQPSSQNAIDTENIDRIVDYKGWLELKK 1259
            RC++V  ++ ++ +  + +S  Q+      +D      + +D ENID+ VDY GWLELKK
Sbjct: 1204 RCYDVKGKKHSLTSDIETNSEMQE----NFNDGGFEPSSPVDVENIDKNVDYSGWLELKK 1259

Query: 1260 RKWKDNLDRRKKQKLGSLRASHQANGVSESLGDMINHKEAQRRTGVGSYFRRQETAMTRC 1319
            RKWKD LDRRKKQ+L + R    AN V+  L    N+K+A  RTGVGSYF+R E ++TRC
Sbjct: 1260 RKWKDTLDRRKKQRLVNSRTPLAANNVTRELNGATNNKDAP-RTGVGSYFKRHEGSVTRC 1318

Query: 1320 HWQIIQLVPSSQSGVFLAWVVVEGIMVRIPITVPRLFYLNSKDPIVEKFPGRRVNKTLPH 1379
            HWQI+QLV S QSG + AW VVEG+M++IPI VPR+FYLNSK PI ++F GRRVNKTLPH
Sbjct: 1319 HWQILQLVHSPQSGQYFAWAVVEGVMLKIPINVPRVFYLNSKAPITDEFVGRRVNKTLPH 1378

Query: 1380 GRRSFNLIEVMIDEDQFRKESKKLAALLADPEVE 1413
            GR S+NL EV+ DE QFR +  KLAALLADPEVE
Sbjct: 1379 GRHSYNLYEVVTDEGQFRTQRNKLAALLADPEVE 1412



 Score =  919 bits (2375), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 434/608 (71%), Positives = 502/608 (82%), Gaps = 32/608 (5%)

Query: 1409 DPEVEVLGWQQNAAKIGMQRCAASSQWFNERISLARYAHI-------------------- 1448
            D + +VLGWQQ AAKIGMQRCAASSQW NERISLARYAH+                    
Sbjct: 1599 DNQYQVLGWQQTAAKIGMQRCAASSQWLNERISLARYAHVPLGNFELDWLIFTADIFFSR 1658

Query: 1449 --------LWISDDGVPDLGGTSEEDECFADEVHQPVLTYPGAYRKVSVELKIHHLSVNA 1500
                    LWISDDGVPD+GG + ED CFADEV QP+LTYPGAYRKVSVE KIHHL+VNA
Sbjct: 1659 ALHDQQQVLWISDDGVPDIGGINIEDVCFADEVQQPILTYPGAYRKVSVEFKIHHLAVNA 1718

Query: 1501 LLKSNQVNEMEGGGLFGFDQDMNSGP-YNNELCGFDETTSSAPAFRVVKQLIQRCLTDAV 1559
            LLKSNQVNEMEGG LFGF++D+  G  ++NE  GFDE  S APAFRV+KQLIQRCLTDAV
Sbjct: 1719 LLKSNQVNEMEGGSLFGFERDIQCGAQFSNEEGGFDEAASCAPAFRVLKQLIQRCLTDAV 1778

Query: 1560 TSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEFRKLGATIIFAN 1619
            TSGNV+ADAILQHLYRW+CSP SKLHDP LHR+ HKVMQKVFA+LLAE RKLGATIIF+N
Sbjct: 1779 TSGNVYADAILQHLYRWICSPQSKLHDPALHRLFHKVMQKVFALLLAELRKLGATIIFSN 1838

Query: 1620 FSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLFMDQYNYGGIPA 1679
            FS++IIDTG+FDLS+AKAYCDSLLK ++TR+LFEWIELEP+ FW SLLFMD+YNYGGI A
Sbjct: 1839 FSRIIIDTGRFDLSSAKAYCDSLLKTVKTRDLFEWIELEPLQFWQSLLFMDKYNYGGIRA 1898

Query: 1680 RADESLDDDSQVDIVSSWNIAEYLPKEIQDHFVLVVSEFMYIPWKHAQKLAASRASLQEG 1739
            + DES D +SQVDIV++WNIAEYLPK+IQDHF  ++S+F+YIPW +A K AA+RASLQ  
Sbjct: 1899 KDDESTDVESQVDIVANWNIAEYLPKKIQDHFDFIISQFLYIPWDYATKQAAARASLQRD 1958

Query: 1740 SSCTPSITVAAAENFESHIVQYVKGEISSYFTGKLLSIVRDAIHHMK-KMNNDQHNSPGV 1798
             +CTPSITV AAE+FESH+ +++K ++SSYF+ K+L IVRD + HMK K  N Q   P  
Sbjct: 1959 DTCTPSITVLAAESFESHVTEHLKEQLSSYFSDKMLGIVRDIVLHMKGKEKNTQDGLPE- 2017

Query: 1799 MQTAANIHKVDAPLEFIKHVCAAFALDQNVQHDVLVMRKNLLKYVRVREFAPEAEFRDPC 1858
             Q   NI+K DA LEFIK VC+  A+DQNVQHDVLVMRKNLLK+VRVREFAPEAEF +  
Sbjct: 2018 -QPPGNIYKGDAALEFIKLVCSVLAIDQNVQHDVLVMRKNLLKFVRVREFAPEAEFSNSS 2076

Query: 1859 PSFILPNVICSYCNDCRDLDLCRDMALLAQDWHCAMPQCGQPYDREVMENALLQIVRQRE 1918
            PS ILPNVICSYC+DCRDLDLCRD ALLAQ+W CA+PQCGQPYD+E MEN LLQIVRQRE
Sbjct: 2077 PSIILPNVICSYCDDCRDLDLCRDSALLAQEWRCAVPQCGQPYDQEEMENKLLQIVRQRE 2136

Query: 1919 RLYHLQDLVCIRCNQVKAAHLAEQCACAGSFRCKEDASDFRSKMQIFLNIANRQGFQLLQ 1978
            RLYH+QDLVCIRC QVKAAHL+EQC+CAGSF+CKEDA+++ SKM + LN+A RQ FQLLQ
Sbjct: 2137 RLYHVQDLVCIRCKQVKAAHLSEQCSCAGSFKCKEDAAEYFSKMLVLLNVATRQKFQLLQ 2196

Query: 1979 ECTSWILE 1986
            E T+WILE
Sbjct: 2197 EFTTWILE 2204


>gi|357471885|ref|XP_003606227.1| DNA polymerase epsilon catalytic subunit A [Medicago truncatula]
 gi|355507282|gb|AES88424.1| DNA polymerase epsilon catalytic subunit A [Medicago truncatula]
          Length = 2248

 Score = 2396 bits (6209), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 1156/1440 (80%), Positives = 1272/1440 (88%), Gaps = 40/1440 (2%)

Query: 4    RRWDRQDGRRTKKQKLIRSAEEELEAKLGYDLFSEGDKRLGWLLTFASSSLEDEDTRKVY 63
            R+WDR+D + +KKQKL+ SAEEELEAKLG+DLFSEG+KRLGWLLTF+SSS EDEDT KVY
Sbjct: 3    RKWDRRDNKVSKKQKLLNSAEEELEAKLGFDLFSEGEKRLGWLLTFSSSSYEDEDTGKVY 62

Query: 64   SCIDLYFVSQDGSTFKSKYKFRPYFYAATKEKMEMDVEAYLRRRYESQIADIEILEKEDL 123
            SCIDLYFV QDGS+FK+KY+FRPYFY ATK KMEMDV+AYLRRRYESQIADI+I+EKEDL
Sbjct: 63   SCIDLYFVKQDGSSFKTKYRFRPYFYVATKNKMEMDVDAYLRRRYESQIADIKIVEKEDL 122

Query: 124  DLKNHLSGLHKSYLKISFDTVQQLMDVKKDLLHVVERNQAKFDAAEAYESILTGKREQRP 183
            DLKNHLSGL KSYL++SFDTVQQLM+VK DL+ VVERN+AK DAAEAYESILTG+REQ+ 
Sbjct: 123  DLKNHLSGLRKSYLRLSFDTVQQLMNVKSDLMQVVERNKAKSDAAEAYESILTGRREQKL 182

Query: 184  QDFLDCIVDLREYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLLEKRVDLLQRAEVHVCA 243
            QDFLDCI+DLREYDVPYH+RFAIDND+RCGQWYDV +S+ G  LE+R DLLQRAEV VCA
Sbjct: 183  QDFLDCIIDLREYDVPYHVRFAIDNDIRCGQWYDVGVSNDGVTLERRTDLLQRAEVRVCA 242

Query: 244  FDIETTKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFK 303
            FDIETTKLPLKFPDADYD +MMISYM+D QGYLI NRECVG+DIEDLE+TPKPEFEG+FK
Sbjct: 243  FDIETTKLPLKFPDADYDSVMMISYMVDRQGYLITNRECVGDDIEDLEFTPKPEFEGFFK 302

Query: 304  VTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDK 363
            VTNV NEIELLRLWF+HMQEVKPGIYVTYNGD+FDWPFLE RAAHHGFKMS+ELGFQCD 
Sbjct: 303  VTNVQNEIELLRLWFSHMQEVKPGIYVTYNGDFFDWPFLERRAAHHGFKMSDELGFQCDM 362

Query: 364  NQGECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKP 423
            NQGECRAKFA HLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDP EVNPEDMVRFAKEKP
Sbjct: 363  NQGECRAKFAPHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPKEVNPEDMVRFAKEKP 422

Query: 424  QMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKA 483
            QMMASYSVSDAV+TYYLY TYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQ+YKA
Sbjct: 423  QMMASYSVSDAVSTYYLYTTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQSYKA 482

Query: 484  NVICPNKHQSDPEKFYRNHLLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQLLNN 543
            NVICPNKHQSDPEKFY+NHLLESETYIGGHVECLESGVFRSD+P SF L+PSA+EQL++N
Sbjct: 483  NVICPNKHQSDPEKFYKNHLLESETYIGGHVECLESGVFRSDIPCSFTLEPSAFEQLISN 542

Query: 544  LDRDLQYAIKVEGKMDLESVSNYDEVKNAIMEKLLRLQEEPIREECPLIYHLDVAAMYPN 603
            LDRDLQYAI+VEGKMDLESVSNYDEVKNAIMEKL+ L++ PIR++CPLIYHLDVAAMYPN
Sbjct: 543  LDRDLQYAIRVEGKMDLESVSNYDEVKNAIMEKLVNLRDAPIRDDCPLIYHLDVAAMYPN 602

Query: 604  IILTNRLQPPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEIFMGKRS---------DYY 654
            IILTNRLQPPSIVTDE+CTACDFNRPGKTCLRKLEWVWRG  F  K+          DYY
Sbjct: 603  IILTNRLQPPSIVTDEICTACDFNRPGKTCLRKLEWVWRGATFAAKKRCIFLNVAALDYY 662

Query: 655  HLKKQIESEFVDGTNGHLSKSFLDLPKMEQQSRLKDRLKKYCQK--AYKRVLDKPVTELR 712
            HLKKQIESEFVDG N   SKSFLDLPK EQQ RLK+RLKKYCQK  AYKRVLDKPVTELR
Sbjct: 663  HLKKQIESEFVDGVNERSSKSFLDLPKAEQQLRLKERLKKYCQKVMAYKRVLDKPVTELR 722

Query: 713  EAGICMRENSFYVDTVR------SFRDRRYEYKGLNKVWKGKLSEAKASGNSIKIQEAQD 766
            EAGICMREN FYVDTVR      SFRDRRYEYKGLNKVWKGKLSEAKASGNSIKIQEAQD
Sbjct: 723  EAGICMRENPFYVDTVRFMLSGSSFRDRRYEYKGLNKVWKGKLSEAKASGNSIKIQEAQD 782

Query: 767  MVVLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKP 826
            MVVLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLL+EKIGKP
Sbjct: 783  MVVLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLVEKIGKP 842

Query: 827  LELDTDGIWCVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPV 886
            LELDTDGIWC LPGSFPENFTFKT D K+KLTISYPCVMLNVDVA NNTNDQYQTL DP 
Sbjct: 843  LELDTDGIWCALPGSFPENFTFKTVDSKRKLTISYPCVMLNVDVAINNTNDQYQTLTDPN 902

Query: 887  SKTYETHSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRG 946
             KTY THSECSIEFEVDGPYKAMI+PASKEEGILIKKRYAVFNDDG+LAELKGFEIKRRG
Sbjct: 903  RKTYTTHSECSIEFEVDGPYKAMIIPASKEEGILIKKRYAVFNDDGSLAELKGFEIKRRG 962

Query: 947  ELKLIKVFQAELFDKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESS 1006
            ELKLIKVFQA+LF+KFLHGST++ECYS VA  ANRWLDLLDNQGKDIADSEL+DYISESS
Sbjct: 963  ELKLIKVFQADLFEKFLHGSTLKECYSEVAKEANRWLDLLDNQGKDIADSELLDYISESS 1022

Query: 1007 TMSKSLADYGEQKSCAVTTARRLSDFLGDTMVKDKGLRCQYIVACEPQGTPVSERAVPVA 1066
            TMSKSLADYG+QKSCAVTTA+RL+DFLGDTMVKDKGLRCQYIVA EP+GTPVSERAVPVA
Sbjct: 1023 TMSKSLADYGQQKSCAVTTAKRLADFLGDTMVKDKGLRCQYIVASEPKGTPVSERAVPVA 1082

Query: 1067 IFETDAEIMKFYLRKWCKTSSDVGIRSIVDWSYYKQRLSSAIQKIITIPAAMQKVSNPVP 1126
            IFETDA+IMKFY+RKWCK SSDVGIRSI+DWSYYKQRLSS+IQKIITIPAAMQKV+NPVP
Sbjct: 1083 IFETDADIMKFYVRKWCKVSSDVGIRSIIDWSYYKQRLSSSIQKIITIPAAMQKVANPVP 1142

Query: 1127 RVVHPDWLYKKVREKEDKFRQRKLVDIFSSLKKDDFL---NKTCNAETNLMDENVEDLED 1183
            RVVHPDWL+KKVREKEDKFRQRK+ D F S+ K++     N +      ++D+ V D+ED
Sbjct: 1143 RVVHPDWLHKKVREKEDKFRQRKIDDTFKSMNKNEHSKKHNDSSGVNLVMVDDTVNDMED 1202

Query: 1184 FPKKRRNSVNGPRPIVRCFEVNNEQKTVKTTDQVDSLRQQLEPSEVSDQQPSSQNAIDTE 1243
            F  K R+S  GPRPI+R +E NNEQ + K   Q DS +Q ++ S + DQ    QN    E
Sbjct: 1203 FGNKGRSSTLGPRPIIRHYEANNEQHSEKFNGQEDSEQQHIDSSNI-DQ----QNETSCE 1257

Query: 1244 NIDRIVDYKGWLELKKRKWKDNLDRRKKQKLG-------SLRASHQANGVSESLGDMINH 1296
            N+DR VDY+GWL+LKKRKWK  L +RKKQ++        + + S   NG  E     +NH
Sbjct: 1258 NVDRTVDYQGWLQLKKRKWKSMLGKRKKQRMSFDFLRLENSKKSDHLNGSLEQTNSKMNH 1317

Query: 1297 KEAQRRTGVGSYFRRQETAMTRCHWQIIQLVPSSQSGVFLAWVVVEGIMVRIPITVPRLF 1356
                 R+ V SYFRR E  +TR HWQIIQLV S Q G F AWVVV+GIM++IPI++PR+F
Sbjct: 1318 G----RSNVSSYFRRHEVVLTRGHWQIIQLVHSPQVGQFFAWVVVDGIMLKIPISIPRVF 1373

Query: 1357 YLNSKDPIVEKFPGRRVNKTLPHGRRSFNLIEVM---IDEDQFRKESKKLAALLADPEVE 1413
            YLNS+ P  E+F G+RVNKTLPHGR S+NL EV+   I+E Q+++ESKKLAALLADP++E
Sbjct: 1374 YLNSRSP-TEEFSGKRVNKTLPHGRHSYNLYEVLVVTINEVQYKEESKKLAALLADPDIE 1432



 Score =  912 bits (2357), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 427/612 (69%), Positives = 496/612 (81%), Gaps = 37/612 (6%)

Query: 1414 VLGWQQNAAKIGMQRCAASSQWFNERISLARYAHI------------------------- 1448
            +LGWQQ AAK+GMQRCAAS QW NE+I+L+RYAH+                         
Sbjct: 1635 ILGWQQMAAKLGMQRCAASVQWLNEKIALSRYAHVPLGNMEFDWLMFTVDTFFCRALRDN 1694

Query: 1449 ---LWISDDGVPDLGGTSEEDECFADEVHQPVLTYPGAYRKVSVELKIHHLSVNALLKSN 1505
               LWISDDG PDLGG   E+ CF DEV QPV T+PGAYRK+SVELKIHHL+V+ALLK N
Sbjct: 1695 QQVLWISDDGFPDLGGNIGEENCFLDEVRQPVCTFPGAYRKISVELKIHHLAVDALLKCN 1754

Query: 1506 QVNEMEGGGLFGFDQDMNSGPYN-NELCGFDETTSSAPAFRVVKQLIQRCLTDAVTSGNV 1564
            QVNEMEGG L GF  + +S  +  N   GF+E+TS   AFRV+K LIQRCL DAVTSGNV
Sbjct: 1755 QVNEMEGGALLGFGHEFDSEAFQVNGQNGFEESTSCTHAFRVLKHLIQRCLADAVTSGNV 1814

Query: 1565 FADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEFRKLGATIIFANFSKVI 1624
            FADAILQHLYRWLCSP SK HDP LH++LHKVMQKVFA+LLAEFRKLGATI+FANFSK+I
Sbjct: 1815 FADAILQHLYRWLCSPQSKFHDPALHQLLHKVMQKVFALLLAEFRKLGATIVFANFSKII 1874

Query: 1625 IDTGKFDLSAAKAYCDSLLKALQTR-----ELFEWIELEPVHFWHSLLFMDQYNYGGIPA 1679
            IDTGK+D S AKAYCDSLL+ +Q+R     +LFEWIELEP+ FW SLLFMDQYNYGGIPA
Sbjct: 1875 IDTGKYDFSTAKAYCDSLLRTIQSRLVFQKDLFEWIELEPLQFWCSLLFMDQYNYGGIPA 1934

Query: 1680 RADESLDDDSQVDIVSSWNIAEYLPKEIQDHFVLVVSEFMYIPWKHAQKLAASRASLQEG 1739
            ++DE+++D+SQVDI+SSWNIAEYLPK+IQDH+V +VS+FMYIPW + +K AA RAS+Q G
Sbjct: 1935 KSDEAMNDESQVDIISSWNIAEYLPKKIQDHYVFIVSQFMYIPWNYTRKQAAIRASVQNG 1994

Query: 1740 SSCTPSITVAAAENFESHIVQYVKGEISSYFTGKLLSIVRDAIHHMKKMN---NDQHNSP 1796
             SCTPSI + AAE FES I +Y+K +ISSYFT KLL +VRD + HMK M    +DQ  S 
Sbjct: 1995 DSCTPSINIGAAEAFESEITEYIKEQISSYFTDKLLGVVRDIVLHMKGMGRSESDQSTSS 2054

Query: 1797 GVMQTAANIHKVDAPLEFIKHVCAAFALDQNVQHDVLVMRKNLLKYVRVREFAPEAEFRD 1856
            G+ Q   ++H+ DA LEFIKHVCA  ALDQ+VQHDV VMRKNLLKYVRVREFAPEAEF D
Sbjct: 2055 GLHQLTDDLHRGDAALEFIKHVCAVLALDQSVQHDVHVMRKNLLKYVRVREFAPEAEFHD 2114

Query: 1857 PCPSFILPNVICSYCNDCRDLDLCRDMALLAQDWHCAMPQCGQPYDREVMENALLQIVRQ 1916
            PC SFILPNVICSYCN+CRDLDLCRD  LL ++WHCA+PQCGQPYDREVMENALLQI RQ
Sbjct: 2115 PCHSFILPNVICSYCNECRDLDLCRDPTLLNEEWHCAVPQCGQPYDREVMENALLQIARQ 2174

Query: 1917 RERLYHLQDLVCIRCNQVKAAHLAEQCACAGSFRCKEDASDFRSKMQIFLNIANRQGFQL 1976
            RER YHLQDLVC+RCNQVKAAHLAEQCACAGSF+CKEDA++F  KM++  NIA+RQ FQL
Sbjct: 2175 RERQYHLQDLVCVRCNQVKAAHLAEQCACAGSFKCKEDATEFCKKMRVIYNIASRQKFQL 2234

Query: 1977 LQECTSWILEVQ 1988
            LQECT+W+LE++
Sbjct: 2235 LQECTAWMLELK 2246


>gi|356544708|ref|XP_003540789.1| PREDICTED: DNA polymerase epsilon catalytic subunit A-like [Glycine
            max]
          Length = 2207

 Score = 2373 bits (6151), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 1145/1414 (80%), Positives = 1259/1414 (89%), Gaps = 32/1414 (2%)

Query: 14   TKKQKLIRSAEEELEAKLGYDLFSEGDKRLGWLLTFASSSLEDEDTRKVYSCIDLYFVSQ 73
            +KK+KL R+ EEELEAKLG+DLFSEG+KRLGWLLTFASSS++DED+ KVYSC+DLYFV+Q
Sbjct: 16   SKKRKLNRTPEEELEAKLGFDLFSEGEKRLGWLLTFASSSVDDEDSYKVYSCVDLYFVAQ 75

Query: 74   DGSTFKSKYKFRPYFYAATKEKMEMDVEAYLRRRYESQIADIEILEKEDLDLKNHLSGLH 133
            DGS+FK+K++FRPYFY ATK+KME+DVEAYL+RRYE QIAD+EI+EKEDLDLKNHLSGL 
Sbjct: 76   DGSSFKTKFRFRPYFYVATKDKMEIDVEAYLKRRYEGQIADVEIIEKEDLDLKNHLSGLR 135

Query: 134  KSYLKISFDTVQQLMDVKKDLLHVVERNQAKFDAAEAYESILTGKREQRPQDFLDCIVDL 193
            KSYLK+SFDTVQQLMDVK+DL+  VERN+AK DAAEA+ S+ T +RE RPQDFLDCI D+
Sbjct: 136  KSYLKLSFDTVQQLMDVKRDLMPTVERNKAKSDAAEAFLSVSTERREHRPQDFLDCITDV 195

Query: 194  REYDVPYHIRFAIDNDVRCGQWYDVSISST-GPLLEKRVDLLQRAEVHVCAFDIETTKLP 252
            REYDVPYH+RFAIDND+RCGQWYDV +SS  G  LEK+ DLLQRAEV +CAFDIETTKLP
Sbjct: 196  REYDVPYHVRFAIDNDIRCGQWYDVGVSSNNGVTLEKKTDLLQRAEVRICAFDIETTKLP 255

Query: 253  LKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNVNNEIE 312
            LKFPDADYD+IMMISYM+DGQGYLIINRECVG+DIED+EYTPKPEFEG FKVTN  NEIE
Sbjct: 256  LKFPDADYDLIMMISYMVDGQGYLIINRECVGDDIEDIEYTPKPEFEGCFKVTNAQNEIE 315

Query: 313  LLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDKNQGECRAKF 372
            LLRLWF+HMQEVKPGIYVTYNGD+FDWPFLE RA HHGFKMS+ELGF+CD NQGECRA++
Sbjct: 316  LLRLWFSHMQEVKPGIYVTYNGDFFDWPFLERRATHHGFKMSDELGFKCDMNQGECRARY 375

Query: 373  ACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQMMASYSVS 432
            ACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQMMASYSVS
Sbjct: 376  ACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQMMASYSVS 435

Query: 433  DAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVICPNKHQ 492
            DAVATYYLY TYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVICPNKHQ
Sbjct: 436  DAVATYYLYTTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVICPNKHQ 495

Query: 493  SDPEKFYRNHLLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQLLNNLDRDLQYAI 552
            SDPEKFY NHLLESETYIGGHVECLESGVFRSD+P+SF L+PSAY+QL+NNLDRDLQYAI
Sbjct: 496  SDPEKFYNNHLLESETYIGGHVECLESGVFRSDIPSSFTLEPSAYQQLINNLDRDLQYAI 555

Query: 553  KVEGKMDLESVSNYDEVKNAIMEKLLRLQEEPIREECPLIYHLDVAAMYPNIILTNRLQP 612
             VEGKMDLE VSNYDEVKNAIMEKL++L++ PIREECPLIYHLDVAAMYPNIILTNRLQP
Sbjct: 556  TVEGKMDLEFVSNYDEVKNAIMEKLVKLRDAPIREECPLIYHLDVAAMYPNIILTNRLQP 615

Query: 613  PSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYYHLKKQIESEFVDGT---N 669
            PSIVT+EVCTACDFNRPGKTCLRKLEWVWRGE FM K+SDYY LK QIESEFVD +   N
Sbjct: 616  PSIVTEEVCTACDFNRPGKTCLRKLEWVWRGETFMAKKSDYYALKTQIESEFVDDSEKNN 675

Query: 670  GHL-------SKSFLDLPKMEQQSRLKDRLKKYCQKAYKRVLDKPVTELREAGICMRENS 722
              L       SKSFLDLPK EQQSRLK+RLKKYCQKAYKRVLDKPVTELREAGICMREN 
Sbjct: 676  KALTHYSEKSSKSFLDLPKAEQQSRLKERLKKYCQKAYKRVLDKPVTELREAGICMRENP 735

Query: 723  FYVDTVRSFRDRRYEYKGLNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHKCIL 782
            FYVDTVRSFRDRRYEYKGLNKVWKGKLSEAKASGNS+KIQEAQDMVVLYDSLQLAHKCIL
Sbjct: 736  FYVDTVRSFRDRRYEYKGLNKVWKGKLSEAKASGNSMKIQEAQDMVVLYDSLQLAHKCIL 795

Query: 783  NSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLPGSF 842
            NSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLL+EKIGKPLELDTDGIWC LPGSF
Sbjct: 796  NSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLVEKIGKPLELDTDGIWCALPGSF 855

Query: 843  PENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEFEV 902
            PENFTFKTKD KKK TISYPCVMLNVDVA NNTNDQYQTL DP+ KTY THSECSIEFEV
Sbjct: 856  PENFTFKTKDPKKKFTISYPCVMLNVDVAINNTNDQYQTLTDPIRKTYTTHSECSIEFEV 915

Query: 903  DGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKF 962
            DGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKF
Sbjct: 916  DGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKF 975

Query: 963  LHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLADYGEQKSCA 1022
            LHGST+EECYSAVA+VAN WLDLLDNQGKDIADSEL+DYISESSTMSKSLADYG+QKSCA
Sbjct: 976  LHGSTLEECYSAVASVANGWLDLLDNQGKDIADSELLDYISESSTMSKSLADYGQQKSCA 1035

Query: 1023 VTTARRLSDFLGDTMVKDKGLRCQYIVACEPQGTPVSERAVPVAIFETDAEIMKFYLRKW 1082
            VTTARRL+DFLGDTMVKDKGLRCQYIVA EP+GTPVSERAVPVAIFETDAE+MKFY+RKW
Sbjct: 1036 VTTARRLADFLGDTMVKDKGLRCQYIVASEPKGTPVSERAVPVAIFETDAEVMKFYVRKW 1095

Query: 1083 CKTSSDVGIRSIVDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLYKKVREKE 1142
            CK SSDVGIRSIVDWSYYKQRLSSAIQKIITIPAAMQKV+NPVPRVVHPDWL+KKVREKE
Sbjct: 1096 CKVSSDVGIRSIVDWSYYKQRLSSAIQKIITIPAAMQKVANPVPRVVHPDWLHKKVREKE 1155

Query: 1143 DKFRQRKLVDIFSSLKKDDFLNKTCNAETN--LMDEN-VEDLEDFPKKRRNSVNGPRPIV 1199
            DKFRQRKLVD F S+ +++   +  ++     +MD + V +LEDF  K R+S   PRPI+
Sbjct: 1156 DKFRQRKLVDAFKSMNRNEHSKRHDDSTRVPLVMDGDIVNELEDFGNKDRSSTCRPRPII 1215

Query: 1200 RCFEVNNEQKTVKTTDQVDSLRQQLEPSEVSDQQPSSQNAIDTENIDRIVDYKGWLELKK 1259
            R +E NNEQ + K  DQ D  +Q  +P +              +N+ R VDY+GWL++KK
Sbjct: 1216 RHYEANNEQHSRKVNDQEDVEQQHNKPLQ--------------QNVYRSVDYQGWLQIKK 1261

Query: 1260 RKWKDNLDRRKKQKLGSLRASHQANGVSESLGDMINHKEAQRRTGVGSYFRRQETAMTRC 1319
            R WKD L+RRKKQ+L + + S + + V E +    N K  Q R+ V SY +R E  +T+ 
Sbjct: 1262 RTWKDILERRKKQRLENSKKSDRVSSVLEQM----NGKGNQGRSHVSSYLKRLEVDLTKR 1317

Query: 1320 HWQIIQLVPSSQSGVFLAWVVVEGIMVRIPITVPRLFYLNSKDPIVEKFPGRRVNKTLPH 1379
            HWQIIQLVPSS  G F AWVVV+G M +I ++VPR+FYLNS+  I E F G+RVNKTLPH
Sbjct: 1318 HWQIIQLVPSSLIGQFFAWVVVDGSMHKIHVSVPRVFYLNSRSAITEGFMGKRVNKTLPH 1377

Query: 1380 GRRSFNLIEVMIDEDQFRKESKKLAALLADPEVE 1413
            GR S+NL EV I+E Q+ + S+KLAALLADP+VE
Sbjct: 1378 GRHSYNLYEVSINEIQYGEASQKLAALLADPDVE 1411



 Score =  914 bits (2361), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 429/611 (70%), Positives = 498/611 (81%), Gaps = 31/611 (5%)

Query: 1409 DPEVEVLGWQQNAAKIGMQRCAASSQWFNERISLARYAHI-------------------- 1448
            D + ++LGWQQ AAK GMQRCAAS QW N+RI+L+RYAH+                    
Sbjct: 1597 DSQYQILGWQQVAAKTGMQRCAASVQWLNQRIALSRYAHVPLGNFELDWLIFIADIFFSR 1656

Query: 1449 --------LWISDDGVPDLGGTSEEDECFADEVHQPVLTYPGAYRKVSVELKIHHLSVNA 1500
                    LWISDDG+PDLGG + E  CF DEV QP LTYPGAYR V+VELKIHHL+VNA
Sbjct: 1657 ALHDNQQVLWISDDGLPDLGGINSEQNCFVDEVQQPALTYPGAYRNVTVELKIHHLAVNA 1716

Query: 1501 LLKSNQVNEMEGGGLFGFDQDMNSGPYN-NELCGFDETTSSAPAFRVVKQLIQRCLTDAV 1559
            LLK N VNEMEGG L  F  +++SG ++ N+  GFDE+TS   AFRV+KQLIQRCL DAV
Sbjct: 1717 LLKYNLVNEMEGGTLLRFGHELDSGAFSTNDQNGFDESTSCVQAFRVLKQLIQRCLADAV 1776

Query: 1560 TSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEFRKLGATIIFAN 1619
            TSGNV+AD+ILQHLYRWLCSP SKLHDP LH++LHKVMQKVFA+LLAEFRKLGATI+FAN
Sbjct: 1777 TSGNVYADSILQHLYRWLCSPKSKLHDPALHQLLHKVMQKVFALLLAEFRKLGATIVFAN 1836

Query: 1620 FSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLFMDQYNYGGIPA 1679
            FSK+IIDTGK+DLS AKAYCDSLL+ +Q+R+LFEWIELEP+ FW SLLFMDQYNYGGIP 
Sbjct: 1837 FSKIIIDTGKYDLSRAKAYCDSLLRTIQSRDLFEWIELEPLQFWCSLLFMDQYNYGGIPT 1896

Query: 1680 RADESLDDDSQVDIVSSWNIAEYLPKEIQDHFVLVVSEFMYIPWKHAQKLAASRASLQEG 1739
            ++DE+++++SQVDI+SSWNIAEYLPK+IQDHFV +VS+FMYIPW +A+K A  RASLQ G
Sbjct: 1897 KSDEAVNNESQVDIISSWNIAEYLPKKIQDHFVFIVSQFMYIPWNYAKKQAQIRASLQNG 1956

Query: 1740 SSCTPSITVAAAENFESHIVQYVKGEISSYFTGKLLSIVRDAIHHMKKMNNDQHN--SPG 1797
             SCTPSI + AAE FES I ++ K +I SYFT KLL IV D   HMK MN  ++N  + G
Sbjct: 1957 DSCTPSINIGAAEAFESEITEFTKEQIGSYFTHKLLGIVHDIGLHMKGMNRLENNQSTSG 2016

Query: 1798 VMQTAANIHKVDAPLEFIKHVCAAFALDQNVQHDVLVMRKNLLKYVRVREFAPEAEFRDP 1857
            +     ++H+ DA LEFIKHVCA  ALDQ+VQH+VLV+RKNLLKYV V+EFAPEA+F  P
Sbjct: 2017 LPPLTGDVHRGDASLEFIKHVCAVLALDQSVQHEVLVLRKNLLKYVDVKEFAPEAKFHGP 2076

Query: 1858 CPSFILPNVICSYCNDCRDLDLCRDMALLAQDWHCAMPQCGQPYDREVMENALLQIVRQR 1917
            C SFIL NVICSYCNDCRDLDLCRD ALL ++W CA+PQC QPYDREVMENALLQ VRQR
Sbjct: 2077 CHSFILSNVICSYCNDCRDLDLCRDSALLTEEWRCAVPQCAQPYDREVMENALLQTVRQR 2136

Query: 1918 ERLYHLQDLVCIRCNQVKAAHLAEQCACAGSFRCKEDASDFRSKMQIFLNIANRQGFQLL 1977
            ERLYHLQDLVC RC+QVKAAHLAEQCACAGSFRCKEDAS+FR KMQIFLNIA+RQ FQLL
Sbjct: 2137 ERLYHLQDLVCTRCHQVKAAHLAEQCACAGSFRCKEDASEFREKMQIFLNIASRQKFQLL 2196

Query: 1978 QECTSWILEVQ 1988
            QECTSWILE++
Sbjct: 2197 QECTSWILELR 2207


>gi|334182383|ref|NP_172303.5| DNA polymerase epsilon subunit 1 [Arabidopsis thaliana]
 gi|426019656|sp|F4HW04.1|DPOE1_ARATH RecName: Full=DNA polymerase epsilon catalytic subunit A; AltName:
            Full=DNA polymerase 2 a; Short=AtPOL2a; AltName: Full=DNA
            polymerase II subunit a; AltName: Full=Protein ABA OVERLY
            SENSITIVE a; AltName: Full=Protein EARLY IN SHORT DAYS 7;
            AltName: Full=Protein EMBRYO DEFECTIVE 142; AltName:
            Full=Protein EMBRYO DEFECTIVE 2284; AltName: Full=Protein
            EMBRYO DEFECTIVE 529; AltName: Full=Protein TILTED 1
 gi|332190145|gb|AEE28266.1| DNA polymerase epsilon subunit 1 [Arabidopsis thaliana]
          Length = 2161

 Score = 2367 bits (6134), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 1139/1413 (80%), Positives = 1266/1413 (89%), Gaps = 28/1413 (1%)

Query: 2    DRRRWDRQDGRRTKKQKLIRSAEEELEAKLGYDLFSEGDKRLGWLLTFASSSLEDEDTRK 61
            D RR DR+D R +KK K++ +AE+ELE+KLG+ LFSEG+ RLGWLLTF+SSS ED DT K
Sbjct: 4    DNRRRDRKDTRWSKKPKVVNTAEDELESKLGFGLFSEGETRLGWLLTFSSSSWEDRDTGK 63

Query: 62   VYSCIDLYFVSQDGSTFKSKYKFRPYFYAATKEKMEMDVEAYLRRRYESQIADIEILEKE 121
            VYSC+DLYFV+QDG +FK+KYKFRPYFYAATK+KME+++EAYLRRRYE Q+ADIEI+EKE
Sbjct: 64   VYSCVDLYFVTQDGFSFKTKYKFRPYFYAATKDKMELELEAYLRRRYERQVADIEIVEKE 123

Query: 122  DLDLKNHLSGLHKSYLKISFDTVQQLMDVKKDLLHVVERNQAKFDAAEAYESILTGKREQ 181
            DLDLKNHLSGL K YLKISFDTVQQLM+VK+DLLH+VERNQAKFDA EAYESIL GKREQ
Sbjct: 124  DLDLKNHLSGLQKKYLKISFDTVQQLMEVKRDLLHIVERNQAKFDALEAYESILAGKREQ 183

Query: 182  RPQDFLDCIVDLREYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLLEKRVDLLQRAEVHV 241
            RPQD LD IVDLREYDVPYH+RFAIDNDVR GQWY+VSISST  +LEKR DLLQRAEV V
Sbjct: 184  RPQDCLDSIVDLREYDVPYHVRFAIDNDVRSGQWYNVSISSTDVILEKRTDLLQRAEVRV 243

Query: 242  CAFDIETTKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGY 301
            CAFDIETTKLPLKFPDA+YD IMMISYM+DGQG+LIINRECVGED+EDLEYTPKPEFEGY
Sbjct: 244  CAFDIETTKLPLKFPDAEYDQIMMISYMVDGQGFLIINRECVGEDVEDLEYTPKPEFEGY 303

Query: 302  FKVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQC 361
            FKVTNV NE+ELL+ WF HMQE+KPGIYVTYNGD+FDWPF+E RA+HHG KM+EELGF+C
Sbjct: 304  FKVTNVKNEVELLQRWFYHMQELKPGIYVTYNGDFFDWPFIERRASHHGIKMNEELGFRC 363

Query: 362  DKNQGECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKE 421
            D+NQGECRAKFACHLDCFAWVKRDSYLPQGS GLKAVTKAKLGYDPLEVNPEDMVRFA E
Sbjct: 364  DQNQGECRAKFACHLDCFAWVKRDSYLPQGSHGLKAVTKAKLGYDPLEVNPEDMVRFAME 423

Query: 422  KPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAY 481
            KPQ MASYSVSDAVATYYLYMTYV+PFIFSLATIIPM PDEVLRKGSGTLCEMLLMV+AY
Sbjct: 424  KPQTMASYSVSDAVATYYLYMTYVNPFIFSLATIIPMVPDEVLRKGSGTLCEMLLMVEAY 483

Query: 482  KANVICPNKHQSDPEKFYRNHLLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQLL 541
            KANV+CPNK+Q+DPEKFY+N LLESETYIGGHVECLESGVFRSD+PTSFKLD SAY+QL+
Sbjct: 484  KANVVCPNKNQADPEKFYQNQLLESETYIGGHVECLESGVFRSDIPTSFKLDSSAYQQLI 543

Query: 542  NNLDRDLQYAIKVEGKMDLESVSNYDEVKNAIMEKLLRLQEEPIREECPLIYHLDVAAMY 601
            +NL RDL+YAI VEGKM ++S+SNYDEVK+ I EKL +L+++PIREE PLIYHLDVAAMY
Sbjct: 544  DNLGRDLEYAITVEGKMRMDSISNYDEVKDEIKEKLEKLRDDPIREEGPLIYHLDVAAMY 603

Query: 602  PNIILTNRLQPPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYYHLKKQIE 661
            PNIILTNRLQPPSIVTDE+CTACDFNRPGKTCLRKLEWVWRG  FMGK+SDYYHLKKQIE
Sbjct: 604  PNIILTNRLQPPSIVTDEICTACDFNRPGKTCLRKLEWVWRGVTFMGKKSDYYHLKKQIE 663

Query: 662  SEFVD-GTNGHLSKSFLDLPKMEQQSRLKDRLKKYCQKAYKRVLDKPVTELREAGICMRE 720
            SEFVD G N   SKSFLDLPK++QQS+LK+RLKKYCQKAYKRVLDKP+TE+REAGICMRE
Sbjct: 664  SEFVDAGANIMSSKSFLDLPKVDQQSKLKERLKKYCQKAYKRVLDKPITEVREAGICMRE 723

Query: 721  NSFYVDTVRSFRDRRYEYKGLNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHKC 780
            N FYVDTVRSFRDRRYEYK LNKVWKGKLSEAKASGNSIKIQEAQDMVV+YDSLQLAHKC
Sbjct: 724  NPFYVDTVRSFRDRRYEYKTLNKVWKGKLSEAKASGNSIKIQEAQDMVVVYDSLQLAHKC 783

Query: 781  ILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLPG 840
            ILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIE+IGKPLELDTDGIWC LPG
Sbjct: 784  ILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIERIGKPLELDTDGIWCCLPG 843

Query: 841  SFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEF 900
            SFPENFTFKT D+ KKLTISYPCVMLNVDVA+NNTNDQYQTLVDPV KTY++HSECSIEF
Sbjct: 844  SFPENFTFKTIDM-KKLTISYPCVMLNVDVAKNNTNDQYQTLVDPVRKTYKSHSECSIEF 902

Query: 901  EVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFD 960
            EVDGPYKAMI+PASKEEGILIKKRYAVFN DGTLAELKGFEIKRRGELKLIKVFQAELFD
Sbjct: 903  EVDGPYKAMIIPASKEEGILIKKRYAVFNHDGTLAELKGFEIKRRGELKLIKVFQAELFD 962

Query: 961  KFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLADYGEQKS 1020
            KFLHGST+EECYSAVAAVA+RWLDLLDNQGKDIADSEL+DYISESSTMSKSLADYGEQKS
Sbjct: 963  KFLHGSTLEECYSAVAAVADRWLDLLDNQGKDIADSELLDYISESSTMSKSLADYGEQKS 1022

Query: 1021 CAVTTARRLSDFLGDTMVKDKGLRCQYIVACEPQGTPVSERAVPVAIFETDAEIMKFYLR 1080
            CAVTTA+RL++FLG TMVKDKGLRCQYIVACEP+GTPVSERAVPVAIF T+ E+MKF+LR
Sbjct: 1023 CAVTTAKRLAEFLGVTMVKDKGLRCQYIVACEPKGTPVSERAVPVAIFTTNPEVMKFHLR 1082

Query: 1081 KWCKTSSDVGIRSIVDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLYKKVRE 1140
            KWCKTSSDVGIR I+DWSYYKQRLSSAIQK+ITIPAAMQKV+NPVPRV+HPDWL+KKVRE
Sbjct: 1083 KWCKTSSDVGIRLIIDWSYYKQRLSSAIQKVITIPAAMQKVANPVPRVLHPDWLHKKVRE 1142

Query: 1141 KEDKFRQRKLVDIFSSLKKDDFLNKTCNAETNLMDENVEDLEDFPKKRRNSVNGPRPIVR 1200
            K+DKFRQRKLVD+FSS  KD  L    + +  +  +NVED+EDF K+ R SV GP+PI R
Sbjct: 1143 KDDKFRQRKLVDMFSSANKDVVL----DTDLPVTKDNVEDIEDFCKENRPSVKGPKPIAR 1198

Query: 1201 CFEVNNEQKTVKTTDQVDSLRQQLEPSEVSDQQPSSQNAIDTENIDRIVDYKGWLELKKR 1260
             +EVN +Q   +  +  D        +E  D        I  +NID+ V+Y+GWLELKKR
Sbjct: 1199 SYEVNKKQSECEQQESWD--------TEFHD--------ISFQNIDKSVNYQGWLELKKR 1242

Query: 1261 KWKDNLDRRKKQKLGSLRASHQANGVSESLGDMINHKEAQRRTGVGSYFRRQETAMTRCH 1320
            KWK  L+++KK++LG LR+S+Q +         IN K  Q R GVGSYFRR E A+T  H
Sbjct: 1243 KWKVTLEKKKKRRLGDLRSSNQVD------THEINQKVGQGRGGVGSYFRRPEEALTSSH 1296

Query: 1321 WQIIQLVPSSQSGVFLAWVVVEGIMVRIPITVPRLFYLNSKDPIVEKFPGRRVNKTLPHG 1380
            WQIIQLVPS QSG F AWVVVEG+M++IP+++PR+FY+NSK PI E F G+ VNK LPHG
Sbjct: 1297 WQIIQLVPSPQSGQFFAWVVVEGLMLKIPLSIPRVFYINSKVPIDEYFQGKCVNKILPHG 1356

Query: 1381 RRSFNLIEVMIDEDQFRKESKKLAALLADPEVE 1413
            R  ++L EV I EDQF+KESKK AALLADP VE
Sbjct: 1357 RPCYSLTEVKIQEDQFKKESKKRAALLADPGVE 1389



 Score =  648 bits (1671), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 332/607 (54%), Positives = 426/607 (70%), Gaps = 55/607 (9%)

Query: 1409 DPEVEVLGWQQNAAKIGMQRCAASSQWFNERISLARYAHI-------------------- 1448
            D   + + WQ+ AAKI M RCAA+ QW + RI+ +RYAH+                    
Sbjct: 1575 DNSYQPVSWQRPAAKIAMFRCAAAFQWLDRRITQSRYAHVPLGNFGLDWLTFTIDIFLSR 1634

Query: 1449 --------LWISDDGVPDLGGTSEEDECFADEVHQPVLTYPGAYRKVSVELKIHHLSVNA 1500
                    LW+SD+GVPDLGG + E+  FADEV Q  L +PGAYRKVSVELKIH+L+VNA
Sbjct: 1635 ALRDQQQVLWVSDNGVPDLGGINNEEAFFADEVQQTSLVFPGAYRKVSVELKIHNLAVNA 1694

Query: 1501 LLKSNQVNEMEGGGLFGFDQDMNS-GPYNNELCGFDETTSSAPAFRVVKQLIQRCLTDAV 1559
            LLKSN VNEMEGGG  GF+QD+N  G  +N+   FDETT  A AFRV+KQLI  CLTD  
Sbjct: 1695 LLKSNLVNEMEGGGFMGFEQDVNPRGINSNDNTSFDETTGCAQAFRVLKQLIHSCLTDVR 1754

Query: 1560 TSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEFRKLGATIIFAN 1619
             S N++AD+ILQ L  WLCSP SKLHDP LH +LHKVMQKVFA+LL + R+LGA II+A+
Sbjct: 1755 KSKNIYADSILQRLSWWLCSPSSKLHDPALHLMLHKVMQKVFALLLTDLRRLGAIIIYAD 1814

Query: 1620 FSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLFMDQYNYGGIPA 1679
            FSKVIIDT KFDLSAAKAYC+SLL  ++  ++FEWI LEPVH+WHSLLFMDQYNY GI A
Sbjct: 1815 FSKVIIDTVKFDLSAAKAYCESLLSTVRNSDIFEWILLEPVHYWHSLLFMDQYNYAGIRA 1874

Query: 1680 RADESLDDDSQVDIVSSWNIAEYLPKEIQDHFVLVVSEFMYIPWKHAQKLAASRASLQEG 1739
              + SLD   +V I   W++A +LP+ I+  F++++++F++ PWK A          ++G
Sbjct: 1875 DDEISLD---EVTIEPKWSVARHLPEYIERDFIIIIAKFIFDPWKFA-------IENKKG 1924

Query: 1740 SSCTPSITVAAAENFESHIVQYVKGEISSYFTGKLLSIVRDAIHHMKKMNNDQHNSPGVM 1799
            SS          E+ E+ +++Y++ +I S F   L+  V D + HMK++N    +     
Sbjct: 1925 SS----------ESLEAQMIEYLREQIGSTFINMLVKKVDDIMSHMKEINVSDAS----- 1969

Query: 1800 QTAANIHKVDAPLEFIKHVCAAFALDQNVQHDVLVMRKNLLKYVRVREFAPEAEFRDPCP 1859
            + +    K D  LEFI+ + A  ALDQNVQ DVLVMRK+LLKY++V+E A EAEF DP P
Sbjct: 1970 RVSGQAPKGDYSLEFIQVISAVLALDQNVQQDVLVMRKSLLKYIKVKECAAEAEFLDPGP 2029

Query: 1860 SFILPNVICSYCNDCRDLDLCRDMALLAQ-DWHCAMPQCGQPYDREVMENALLQIVRQRE 1918
            SFILPNV CS C+  RDLD+CRD ALL + +W CA  QCG+ YDRE ME++LL++VRQRE
Sbjct: 2030 SFILPNVACSNCDAYRDLDICRDPALLTEKEWSCADTQCGKIYDREQMESSLLEMVRQRE 2089

Query: 1919 RLYHLQDLVCIRCNQVKAAHLAEQCACAGSFRCKEDASDFRSKMQIFLNIANRQGFQLLQ 1978
            R+YH+QD+VCIRCNQVKAAHL EQC C+GSFRCKE  S+F  +M+IF++IA RQ F+LL+
Sbjct: 2090 RMYHMQDVVCIRCNQVKAAHLTEQCECSGSFRCKESGSEFSKRMEIFMDIAKRQKFRLLE 2149

Query: 1979 ECTSWIL 1985
            E  SWI+
Sbjct: 2150 EYISWII 2156


>gi|356540065|ref|XP_003538511.1| PREDICTED: LOW QUALITY PROTEIN: DNA polymerase epsilon catalytic
            subunit A-like [Glycine max]
          Length = 2205

 Score = 2352 bits (6095), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 1133/1413 (80%), Positives = 1253/1413 (88%), Gaps = 33/1413 (2%)

Query: 15   KKQKLIRSAEEELEAKLGYDLFSEGDKRLGWLLTFASSSLEDEDTRKVYSCIDLYFVSQD 74
            KK+KL R+ EEELEAK G+DLF+EG+KRLGWLLT+ASSS++DED  KVYSC+DLYFV+QD
Sbjct: 16   KKRKLNRTPEEELEAKFGFDLFTEGEKRLGWLLTYASSSVDDEDGYKVYSCVDLYFVAQD 75

Query: 75   GSTFKSKYKFRPYFYAATKEKMEMDVEAYLRRRYESQIADIEILEKEDLDLKNHLSGLHK 134
            GS+FK+K++FRPYFY ATK+KME+DVEAYL+RRYE QIAD+EI+EKEDLDLKNHLSGL K
Sbjct: 76   GSSFKTKFRFRPYFYVATKDKMEIDVEAYLKRRYEGQIADVEIIEKEDLDLKNHLSGLRK 135

Query: 135  SYLKISFDTVQQLMDVKKDLLHVVERNQAKFDAAEAYESILTGKREQRPQDFLDCIVDLR 194
            SYLK+SFDTVQQLMDVK+DL+  VERN+ K DAAEA+ S+ T +REQRPQDFLDCI DLR
Sbjct: 136  SYLKLSFDTVQQLMDVKRDLMPTVERNKVKSDAAEAFLSMSTERREQRPQDFLDCITDLR 195

Query: 195  EYDVPYHIRFAIDNDVRCGQWYDVSI-SSTGPLLEKRVDLLQRAEVHVCAFDIETTKLPL 253
            EYDVPYH+RFAIDND+RCGQWYDV + ++ G  LEK+ DLLQRAEV +CAFDIETTKLPL
Sbjct: 196  EYDVPYHVRFAIDNDIRCGQWYDVGVPTNNGVTLEKKTDLLQRAEVRICAFDIETTKLPL 255

Query: 254  KFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNVNNEIEL 313
            KFPDADYD+IMMISYM+DGQGYLIINRECVG+DIED+EYTPKPEFEG FKVTNV NEIEL
Sbjct: 256  KFPDADYDLIMMISYMVDGQGYLIINRECVGDDIEDIEYTPKPEFEGCFKVTNVQNEIEL 315

Query: 314  LRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDKNQGECRAKFA 373
            LRLWF+HMQ+VKPGIYVTYNGD+FDWPFLE RA HHGFKMS+ELGF+CD NQGECRA++A
Sbjct: 316  LRLWFSHMQDVKPGIYVTYNGDFFDWPFLERRATHHGFKMSDELGFKCDTNQGECRARYA 375

Query: 374  CHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQMMASYSVSD 433
            CHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMV FAKEKPQMMASYSVSD
Sbjct: 376  CHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVCFAKEKPQMMASYSVSD 435

Query: 434  AVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVICPNKHQS 493
            AVATYYLY TYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVICPNKHQS
Sbjct: 436  AVATYYLYTTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVICPNKHQS 495

Query: 494  DPEKFYRNHLLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQLLNNLDRDLQYAIK 553
            DPEKFY NHLLESETYIGGHVECLESGVFRSD+P+SFKL+PSAY+QL+NNLDRDLQYAI 
Sbjct: 496  DPEKFYNNHLLESETYIGGHVECLESGVFRSDIPSSFKLEPSAYQQLINNLDRDLQYAIT 555

Query: 554  VEGKMDLESVSNYDEVKNAIMEKLLRLQEEPIREECPLIYHLDVAAMYPNIILTNRLQPP 613
            VEGKMDLE VSNYDEVKNAIMEKL++L+E PIREECPLIYHLDVAAMYPNIILTNRLQPP
Sbjct: 556  VEGKMDLEFVSNYDEVKNAIMEKLVKLREAPIREECPLIYHLDVAAMYPNIILTNRLQPP 615

Query: 614  SIVTDEVCTACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYYHLKKQIESEFVDGTNGH-- 671
            SIVT+EVCTACDFNRPGKTCLRKLEWVWRGE FM K+SDYY LK QIESEFVD +  +  
Sbjct: 616  SIVTEEVCTACDFNRPGKTCLRKLEWVWRGETFMAKKSDYYALKTQIESEFVDDSEKNNR 675

Query: 672  --------LSKSFLDLPKMEQQSRLKDRLKKYCQKAYKRVLDKPVTELREAGICMRENSF 723
                     SKSFLDLPK EQQSRLK+RLKKYCQKAYKRVLDKPVTELREAGICMREN F
Sbjct: 676  ALSHYSEKSSKSFLDLPKAEQQSRLKERLKKYCQKAYKRVLDKPVTELREAGICMRENPF 735

Query: 724  YVDTVRSFRDRRYEYKGLNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHKCILN 783
            YVDTVRSFRDRRYEYKGLNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHKCILN
Sbjct: 736  YVDTVRSFRDRRYEYKGLNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHKCILN 795

Query: 784  SFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLPGSFP 843
            SFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLL+EKIGKPLELDTDGIWC LPGSFP
Sbjct: 796  SFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLVEKIGKPLELDTDGIWCALPGSFP 855

Query: 844  ENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEFEVD 903
            ENFTFKT+D KKK TISYPCVMLNVDVA NN+NDQYQTL DP+ KTY T SECSIEFEVD
Sbjct: 856  ENFTFKTRDPKKKFTISYPCVMLNVDVAINNSNDQYQTLTDPIRKTYTTRSECSIEFEVD 915

Query: 904  GPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFL 963
            GPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFL
Sbjct: 916  GPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFL 975

Query: 964  HGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLADYGEQKSCAV 1023
            HGST+EECYSAVA+VAN WLDLLDNQGKDIADSEL+DYISESSTMSKS ADYG QKSCAV
Sbjct: 976  HGSTLEECYSAVASVANGWLDLLDNQGKDIADSELLDYISESSTMSKSFADYGLQKSCAV 1035

Query: 1024 TTARRLSDFLGDTMVKDKGLRCQYIVACEPQGTPVSERAVPVAIFETDAEIMKFYLRKWC 1083
             TARRL+DFLGDTMVKDKGLRCQYIVA EP+GTPVSERAVPVAIFETDAE+MKFY+RKWC
Sbjct: 1036 ATARRLADFLGDTMVKDKGLRCQYIVASEPKGTPVSERAVPVAIFETDAEVMKFYVRKWC 1095

Query: 1084 KTSSDVGIRSIVDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLYKKVREKED 1143
            K SSDV IRSI+DWSYYKQRLSSAIQKIITIPAAMQKV+NPVPRVVHPDWL+KKVREKED
Sbjct: 1096 KVSSDVDIRSIIDWSYYKQRLSSAIQKIITIPAAMQKVANPVPRVVHPDWLHKKVREKED 1155

Query: 1144 KFRQRKLVDIFSSLKKDDFLNKTCNAETNLM---DENVEDLEDFPKKRRNSVNGPRPIVR 1200
            KFRQRKLVD F S+ +++   K  ++    +   D+ V +LEDF  K R+S   PRPI+R
Sbjct: 1156 KFRQRKLVDAFKSMNRNEHSKKHNDSNRVPLVIDDDIVNELEDFGNKDRSSTCRPRPIIR 1215

Query: 1201 CFEVNNEQKTVKTTDQVDSLRQQLEPSEVSDQQPSSQNAIDTENIDRIVDYKGWLELKKR 1260
             +E NNE+ + K  DQ D  +Q  +P +              + +D+ VDY+GWL++KK+
Sbjct: 1216 HYEANNERHSGKLNDQ-DVEQQHNKPLQ--------------QKVDKNVDYEGWLQIKKQ 1260

Query: 1261 KWKDNLDRRKKQKLGSLRASHQANGVSESLGDMINHKEAQRRTGVGSYFRRQETAMTRCH 1320
             WKD L+RRKK++L + + S + NGV + +    N K  Q R+ V SY +R E  +T+ H
Sbjct: 1261 TWKDILERRKKRRLENSKKSDRVNGVLQQM----NGKGNQGRSHVSSYLKRLEVDLTKRH 1316

Query: 1321 WQIIQLVPSSQSGVFLAWVVVEGIMVRIPITVPRLFYLNSKDPIVEKFPGRRVNKTLPHG 1380
            WQIIQLVPSS  G F AWVVV+G M +IP++VPR+FYLNS+  I E+F G+RVNKTLPHG
Sbjct: 1317 WQIIQLVPSSLIGHFFAWVVVDGSMHKIPVSVPRVFYLNSRSDITEEFMGKRVNKTLPHG 1376

Query: 1381 RRSFNLIEVMIDEDQFRKESKKLAALLADPEVE 1413
            R S+NL EV I+E Q+ + SKKLAALLADP+VE
Sbjct: 1377 RHSYNLYEVSINEIQYGEASKKLAALLADPDVE 1409



 Score =  912 bits (2356), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 425/611 (69%), Positives = 499/611 (81%), Gaps = 31/611 (5%)

Query: 1409 DPEVEVLGWQQNAAKIGMQRCAASSQWFNERISLARYAHI-------------------- 1448
            D + ++LGWQQ AAK+ MQRCAAS QW N+RI+L+RYAH+                    
Sbjct: 1595 DSQYQILGWQQVAAKLXMQRCAASVQWLNQRIALSRYAHVPLGNFELDWLIFIADIFFSR 1654

Query: 1449 --------LWISDDGVPDLGGTSEEDECFADEVHQPVLTYPGAYRKVSVELKIHHLSVNA 1500
                    LWISDDG+PDLGG + E  CF DEV QPVLTYPGAYR V+VELKIHHL+VNA
Sbjct: 1655 ALHDNQQVLWISDDGLPDLGGINGEQNCFVDEVQQPVLTYPGAYRNVTVELKIHHLAVNA 1714

Query: 1501 LLKSNQVNEMEGGGLFGFDQDMNSGPYN-NELCGFDETTSSAPAFRVVKQLIQRCLTDAV 1559
            LLK N VNEMEGG L GF  +++SG ++ N+  GFDE+TS A AFRV+KQLIQRCL DAV
Sbjct: 1715 LLKYNLVNEMEGGTLLGFGHELDSGAFSTNDQNGFDESTSCAQAFRVLKQLIQRCLADAV 1774

Query: 1560 TSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEFRKLGATIIFAN 1619
            TSGNV+AD+ILQHLYRWLCSP SKLHDP LH++LHKVMQKVFA+LLAEFRKLGA I+FAN
Sbjct: 1775 TSGNVYADSILQHLYRWLCSPKSKLHDPALHQLLHKVMQKVFALLLAEFRKLGAMIVFAN 1834

Query: 1620 FSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLFMDQYNYGGIPA 1679
            F+K++IDTGK+DLS AKAYCDSLL+ +Q+R+LFEW+ELEP+ FW SLLFMDQYNYGGIP 
Sbjct: 1835 FTKIVIDTGKYDLSRAKAYCDSLLRTIQSRDLFEWVELEPLQFWCSLLFMDQYNYGGIPT 1894

Query: 1680 RADESLDDDSQVDIVSSWNIAEYLPKEIQDHFVLVVSEFMYIPWKHAQKLAASRASLQEG 1739
            ++DE+L+D+SQVDI+SSWNIAEYLPK+IQDHFV +VS+FMYIPW +A+K A  RASLQ G
Sbjct: 1895 KSDEALNDESQVDIISSWNIAEYLPKKIQDHFVFIVSQFMYIPWNYAKKQAQIRASLQNG 1954

Query: 1740 SSCTPSITVAAAENFESHIVQYVKGEISSYFTGKLLSIVRDAIHHMKKMNNDQHN--SPG 1797
             SCTPSI + AAE FES + ++ K +ISSYFT KLL IV D   HMK MN  ++N  + G
Sbjct: 1955 DSCTPSINIGAAEAFESEVTEFTKDQISSYFTHKLLGIVHDIGLHMKGMNRSENNQSTSG 2014

Query: 1798 VMQTAANIHKVDAPLEFIKHVCAAFALDQNVQHDVLVMRKNLLKYVRVREFAPEAEFRDP 1857
            + Q   ++H+ DA LEFIKHVCA  ALD +VQH+VLV+RKNLLKYV V+EFAPEA+F  P
Sbjct: 2015 LPQLTGDVHRGDASLEFIKHVCAVLALDHSVQHEVLVLRKNLLKYVDVKEFAPEAKFHGP 2074

Query: 1858 CPSFILPNVICSYCNDCRDLDLCRDMALLAQDWHCAMPQCGQPYDREVMENALLQIVRQR 1917
            C SF+L NVICSYCNDCRDLDLCRD ALL ++W CA+PQCGQPYDREVMENALLQ VRQR
Sbjct: 2075 CHSFVLSNVICSYCNDCRDLDLCRDSALLTEEWRCAVPQCGQPYDREVMENALLQTVRQR 2134

Query: 1918 ERLYHLQDLVCIRCNQVKAAHLAEQCACAGSFRCKEDASDFRSKMQIFLNIANRQGFQLL 1977
            ERLY LQDLVC RC+QVKAAHLAEQC CAGSFRCKEDAS+FR KMQIFLNIA+ Q FQLL
Sbjct: 2135 ERLYQLQDLVCTRCHQVKAAHLAEQCVCAGSFRCKEDASEFREKMQIFLNIASHQKFQLL 2194

Query: 1978 QECTSWILEVQ 1988
            +ECTSWILE++
Sbjct: 2195 EECTSWILELR 2205


>gi|297843602|ref|XP_002889682.1| EMB2284/POL2A/TIL1 [Arabidopsis lyrata subsp. lyrata]
 gi|297335524|gb|EFH65941.1| EMB2284/POL2A/TIL1 [Arabidopsis lyrata subsp. lyrata]
          Length = 2241

 Score = 2286 bits (5925), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 1125/1451 (77%), Positives = 1245/1451 (85%), Gaps = 84/1451 (5%)

Query: 2    DRRRWDRQDGRRTKKQKLIRSAEEELEAKLGYDLFSEGDKRLGWLLTFASSSLEDEDTRK 61
            D RR DR+D R +KK K++ +AE+ELE+KLG+ LFSEG+ RLGWLLTF+SSS ED DT K
Sbjct: 4    DNRRRDRKDTRWSKKPKVVNTAEDELESKLGFGLFSEGETRLGWLLTFSSSSWEDRDTGK 63

Query: 62   VYSCIDLYFVSQDGSTFKSKYKFRPYFYAATKEKMEMDVEAYLRRRYESQIADIEILEKE 121
            VYSC+DLYFV+QDG +FK+KYKFRPYFYAATK+KME++VEAYLRRRYE Q+ADIEI+EKE
Sbjct: 64   VYSCVDLYFVTQDGFSFKTKYKFRPYFYAATKDKMELEVEAYLRRRYERQVADIEIVEKE 123

Query: 122  DLDLKNHLSGLHKSYLKISFDTVQQLMDVKKDLLHVVERNQAKFDAAEAYESILTGKREQ 181
            DLDLKNHLSGL K YLKISFDTVQQLM+VK+DLLH+VERNQAKFDA EAYESIL GKREQ
Sbjct: 124  DLDLKNHLSGLQKKYLKISFDTVQQLMEVKRDLLHIVERNQAKFDALEAYESILAGKREQ 183

Query: 182  RPQDFLDCIVDLREYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLLEKRVDLLQRAEVHV 241
            RPQD LD IVDLREYDVPYH+RFAIDNDVR GQWY+VSISST  +LEKR DLLQRAEV V
Sbjct: 184  RPQDCLDSIVDLREYDVPYHVRFAIDNDVRSGQWYNVSISSTDVILEKRTDLLQRAEVRV 243

Query: 242  CAFDIETTKLPLKFPDADYDIIMMISYMLDGQGYLIINRE---CVGEDIEDLEYTPKPEF 298
            CAFDIETTKLPLKFPDA+YD IMMISYM+DGQG+LIINRE   CVGED+EDLEYTPKPEF
Sbjct: 244  CAFDIETTKLPLKFPDAEYDQIMMISYMVDGQGFLIINREVTACVGEDVEDLEYTPKPEF 303

Query: 299  EGYFKVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELG 358
            EGYFKVTNV NE+ELL+ WF HMQE+KPGIYVTYNGD+FDWPF+E RA+HHG KM+EELG
Sbjct: 304  EGYFKVTNVKNEVELLQRWFYHMQELKPGIYVTYNGDFFDWPFIERRASHHGIKMNEELG 363

Query: 359  FQCDKNQGECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRF 418
            F+CD NQGECRAKF CHLDCFAWVKRDSYLPQGS GLKAVTKAKLGYDPLEVNPEDMVRF
Sbjct: 364  FRCDHNQGECRAKFVCHLDCFAWVKRDSYLPQGSHGLKAVTKAKLGYDPLEVNPEDMVRF 423

Query: 419  AKEKPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMV 478
            A EKPQ MASYSVSDAVATYYLYMTYV+PFIFSLATIIPM PDEVLRKGSGTLCEMLLMV
Sbjct: 424  AMEKPQTMASYSVSDAVATYYLYMTYVNPFIFSLATIIPMVPDEVLRKGSGTLCEMLLMV 483

Query: 479  ---------QAYKANVICPNKHQSDPEKFYRNHLLESETYIGGHVECLESGVFRSDLPTS 529
                     QAYK NV+CPNK+Q+DPEKFY+N LLESETYIGGHVECLESG         
Sbjct: 484  QVSTYLPQAQAYKVNVVCPNKNQADPEKFYQNQLLESETYIGGHVECLESG--------- 534

Query: 530  FKLDPSAYEQLLNNLDRDLQYAIKVEGKMDLESVSNYDEVKNAIMEKLLRLQEEPIREEC 589
                     QL++NL RDL+YAI VEGKM ++S+SNYDEVK+ I EKL +L+++PIREE 
Sbjct: 535  ---------QLIDNLGRDLEYAITVEGKMRMDSISNYDEVKDEIKEKLEKLRDDPIREEG 585

Query: 590  PLIYHLDVAAMYPNIILTNRLQ-----PPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGE 644
            PLIYHLDVAAMYPNIILTNRLQ     PPSIVTDEVCTACDFN PGKTCLRKLEWVWRG 
Sbjct: 586  PLIYHLDVAAMYPNIILTNRLQVHLISPPSIVTDEVCTACDFNLPGKTCLRKLEWVWRGV 645

Query: 645  IFMGKRSDYYHLKKQIESEFVD-GTNGHLSKSFLDLPKMEQQSRLKDRLKKYCQKAYKRV 703
             FMGK+SDYYHLKKQIESEFVD G N   SKSFLDLPK++QQS+LK+RLKKYCQKAYKRV
Sbjct: 646  TFMGKKSDYYHLKKQIESEFVDAGANIQSSKSFLDLPKLDQQSKLKERLKKYCQKAYKRV 705

Query: 704  LDKPVTELREAGICMRENSFYVDTVRSFRDRRYEYKGLNKVWKGKLSEAKASGNSIKIQE 763
            LDKP+TE+REAGICMREN FYVDTVRSFRDRRYEYK LNKVWKGKLSEAKASGNSIKIQE
Sbjct: 706  LDKPITEVREAGICMRENPFYVDTVRSFRDRRYEYKTLNKVWKGKLSEAKASGNSIKIQE 765

Query: 764  AQDMVVLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKI 823
            AQDMVV+YDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIE+I
Sbjct: 766  AQDMVVVYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIERI 825

Query: 824  GKPLELDTDGIWCVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLV 883
            GKPLELDTDGIWC LPGSFPENFTFKT D+ KKLTISYPCVMLNVDVA+NNTNDQYQTLV
Sbjct: 826  GKPLELDTDGIWCCLPGSFPENFTFKTIDM-KKLTISYPCVMLNVDVAKNNTNDQYQTLV 884

Query: 884  DPVSKTYETHSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIK 943
            DPV KTYE+HSECSIEFEVDGPYKAMI+PASKEEGILIKKRYAVFN DGTLAELKGFEIK
Sbjct: 885  DPVRKTYESHSECSIEFEVDGPYKAMIIPASKEEGILIKKRYAVFNHDGTLAELKGFEIK 944

Query: 944  RRGELKLIKVFQAELFDKFLHGSTIEECYSAVAAVANRWLDLLD---------------- 987
            RRGELKLIKVFQAELFDKFLHGST+EECYSAVA VA+RWLDLLD                
Sbjct: 945  RRGELKLIKVFQAELFDKFLHGSTLEECYSAVAEVADRWLDLLDVCEIALIFLIGFLSHF 1004

Query: 988  --NQGKDIADSELIDYISESSTMSKSLADYGEQKSCAVTTARRLSDFLGDTMVKDKGLRC 1045
              NQGKDIADSEL+DYISESSTMSKSLADYGEQKSCAVTTA+RL++FLG TMVKDKGLRC
Sbjct: 1005 LQNQGKDIADSELLDYISESSTMSKSLADYGEQKSCAVTTAKRLAEFLGVTMVKDKGLRC 1064

Query: 1046 QYIVACEPQGTPVSERAVPVAIFETDAEIMKFYLRKWCKTSSDVGIRSIVDWSYYKQRLS 1105
            QYIVACEP+GTPVSERAVPVAIF T+ E+MKF+LRKWCKTSSDVGIR I+DWSYYKQRLS
Sbjct: 1065 QYIVACEPKGTPVSERAVPVAIFTTNPEVMKFHLRKWCKTSSDVGIRLIIDWSYYKQRLS 1124

Query: 1106 SAIQKIITIPAAMQKVSNPVPRVVHPDWLYKKVREKEDKFRQRKLVDIFSSLKKDDFLNK 1165
            SAIQK+ITIPAAMQKV+NPVPRV+HPDWL+KKVREK+DKFRQRKLVD+FSS  KD  L  
Sbjct: 1125 SAIQKVITIPAAMQKVANPVPRVLHPDWLHKKVREKDDKFRQRKLVDMFSSANKDGGL-- 1182

Query: 1166 TCNAETNLMDENVEDLEDFPKKRRNSVNGPRPIVRCFEVNNEQKTVKTTDQVDSLRQQLE 1225
                +  +  +NVED+EDF K+ R SV GP+PI R +EVN +Q          S R+Q E
Sbjct: 1183 --ETDHPVTKDNVEDIEDFCKENRPSVKGPKPIARSYEVNKKQ----------SEREQQE 1230

Query: 1226 PSEVSDQQPSSQNAIDTENIDRIVDYKGWLELKKRKWKDNLDRRKKQKLGSLRASHQANG 1285
              +     P   + I  +NID+ V+Y+GWLELKKRKWK  L+++KK++LG LR+ +Q++ 
Sbjct: 1231 SWD-----PEFHD-ISFQNIDKSVNYQGWLELKKRKWKVTLEKKKKRRLGDLRSPNQSD- 1283

Query: 1286 VSESLGDMINHKEAQRRTGVGSYFRRQETAMTRCHWQ---IIQLVPSSQSGVFLAWVVVE 1342
                    IN K  Q R GVGSYFRR E A+T  HWQ   IIQLVPS QSG F AWVVVE
Sbjct: 1284 -----AHEINQKVGQGRGGVGSYFRRPEEALTSSHWQVCTIIQLVPSPQSGQFFAWVVVE 1338

Query: 1343 GIMVRIPITVPRLFYLNSKDPIVEKFPGRRVNKTLPHGRRSFNLIEVMIDEDQFRKESKK 1402
            G+M++IP+T+PR+FY+NSK PI E F G+ VNK LPHGR  ++L EV I ED+F+KESKK
Sbjct: 1339 GLMLKIPLTIPRVFYINSKVPIAEYFQGKCVNKILPHGRPCYSLTEVKIQEDKFKKESKK 1398

Query: 1403 LAALLADPEVE 1413
             AALLADP VE
Sbjct: 1399 RAALLADPRVE 1409



 Score =  582 bits (1501), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 323/669 (48%), Positives = 412/669 (61%), Gaps = 117/669 (17%)

Query: 1409 DPEVEVLGWQQNAAKIGMQRCAASSQWFNERISLARYAHI-------------------- 1448
            D   + + WQ+ AAKI M RCAA+ QW + RI+ +RYAH+                    
Sbjct: 1593 DNSYQPVSWQRPAAKIAMFRCAAAFQWLDRRIAQSRYAHVPLGNFGLDWLTFTIDIFLSR 1652

Query: 1449 --------LWISDDGVPDLGGTSEEDECFADEVHQPVLTYPGAYRKVSVELKIHHLSVNA 1500
                    LW+SD+GVPDLGG + E+  FADEV Q  L +PGAYRKVSVELKIH+L+VNA
Sbjct: 1653 ALRDQQQVLWVSDNGVPDLGGINNEEAFFADEVQQTSLVFPGAYRKVSVELKIHNLAVNA 1712

Query: 1501 LLKSNQVNEMEGGGLFGFDQDMNS-GPYNNELCGFDETTSSAPAFRVVKQLIQRCLTDAV 1559
            LLKSN VNEMEGGG  GF+QD+N  G  +N+   FDETT  A AFRV+KQLI  CLTD  
Sbjct: 1713 LLKSNLVNEMEGGGFLGFEQDVNPRGINSNDNTSFDETTGCAQAFRVLKQLIHSCLTDVR 1772

Query: 1560 TSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEFRKLGATIIFAN 1619
             S N++AD+ILQ L  WLCSP SKLHDP LH +LHKVMQKVFA+LL + R+LGA II+A+
Sbjct: 1773 KSENIYADSILQRLSWWLCSPSSKLHDPALHLMLHKVMQKVFALLLTDLRRLGAIIIYAD 1832

Query: 1620 FSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIE---------LEPVHFWHSLLFMD 1670
            FSKVIIDT KFDLSAAKAYC+SLL  +  R +   ++         ++  HF   +  + 
Sbjct: 1833 FSKVIIDTVKFDLSAAKAYCESLLSTVGNRLVSSLLDIYVYDSKSLMDCTHFPAMIFVLF 1892

Query: 1671 QYNYGGIPARADE-SLDDDSQVDIVSSWN--------------IAEYLPKEI-------- 1707
             YNY GI A  DE SLD   +V I   WN              +A + P  +        
Sbjct: 1893 FYNYAGIRATDDEISLD---EVTIEPKWNTTLTQTNVSENKKHVATHGPFFLDTDASHLS 1949

Query: 1708 -QDHFVLVVSEFMYIPWKHAQKLAASRASLQEGSSCTPSITVAAAENFESHIVQYVKGEI 1766
             Q  F+++V++F++ PWK A          ++GSS          E+ E+ +V+Y++ +I
Sbjct: 1950 WQRDFIIIVAKFIFDPWKFA-------IEKKKGSS----------ESLEAQMVEYLREQI 1992

Query: 1767 SSYFTGKLLSIVRDAIHHMKKMNNDQHNSPGVMQTAANIHKVDAPLEFIKHVCAAFALDQ 1826
             S F   L+  V D + HMK++N    +     + +    K D  LEFI+ + A  ALDQ
Sbjct: 1993 GSTFINMLVKKVDDIMSHMKEINVSDAS-----RVSGQAPKGDYTLEFIQVISAVLALDQ 2047

Query: 1827 NVQHDVL-----------------------------VMRKNLLKYVRVREFAPEAEFRDP 1857
            NV  DVL                             VMRK+LLKY++V+E A EAEF DP
Sbjct: 2048 NVLQDVLLENLFVTGFIHKSNLISGNLVLETMFTNRVMRKSLLKYIKVKECAAEAEFLDP 2107

Query: 1858 CPSFILPNVICSYCNDCRDLDLCRDMALLAQ-DWHCAMPQCGQPYDREVMENALLQIVRQ 1916
             PSFILPNV CS C+  RDLD+CRD ALL + +W C  PQCG+ YDRE ME++LL++VRQ
Sbjct: 2108 GPSFILPNVACSNCDAYRDLDICRDPALLTEKEWSCGDPQCGKIYDREQMESSLLEMVRQ 2167

Query: 1917 RERLYHLQDLVCIRCNQVKAAHLAEQCACAGSFRCKEDASDFRSKMQIFLNIANRQGFQL 1976
            RER+YH+QDLVCIRCNQVKAAHL EQC C+GSFRCKE  S+F  +M+IFL+IA RQ F+L
Sbjct: 2168 RERMYHMQDLVCIRCNQVKAAHLTEQCECSGSFRCKESGSEFSKRMEIFLDIAKRQKFRL 2227

Query: 1977 LQECTSWIL 1985
            L+E  SWIL
Sbjct: 2228 LEEYISWIL 2236


>gi|6579197|gb|AAF18240.1|AC011438_2 T23G18.11 [Arabidopsis thaliana]
          Length = 2271

 Score = 2284 bits (5918), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 1125/1457 (77%), Positives = 1249/1457 (85%), Gaps = 90/1457 (6%)

Query: 2    DRRRWDRQDGRRTKKQKLIRSAEEELEAKLGYDLFSEGDKRLGWLLTFASSSLEDEDTRK 61
            D RR DR+D R +KK K++ +AE+ELE+KLG+ LFSEG+ RLGWLLTF+SSS ED DT K
Sbjct: 4    DNRRRDRKDTRWSKKPKVVNTAEDELESKLGFGLFSEGETRLGWLLTFSSSSWEDRDTGK 63

Query: 62   VYSCIDLYFVSQDGSTFKSKYKFRPYFYAATKEKMEMDVEAYLRRRYESQIADIEILEKE 121
            VYSC+DLYFV+QDG +FK+KYKFRPYFYAATK+KME+++EAYLRRRYE Q+ADIEI+EKE
Sbjct: 64   VYSCVDLYFVTQDGFSFKTKYKFRPYFYAATKDKMELELEAYLRRRYERQVADIEIVEKE 123

Query: 122  DLDLKNHLSGLHKSYLKISFDTVQQLMDVKKDLLHVVERNQAKFDAAEAYESILTGKREQ 181
            DLDLKNHLSGL K YLKISFDTVQQLM+VK+DLLH+VERNQAKFDA EAYESIL GKREQ
Sbjct: 124  DLDLKNHLSGLQKKYLKISFDTVQQLMEVKRDLLHIVERNQAKFDALEAYESILAGKREQ 183

Query: 182  RPQDFLDCIVDLREYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLLEKRVDLLQRAEVHV 241
            RPQD LD IVDLREYDVPYH+RFAIDNDVR GQWY+VSISST  +LEKR DLLQRAEV V
Sbjct: 184  RPQDCLDSIVDLREYDVPYHVRFAIDNDVRSGQWYNVSISSTDVILEKRTDLLQRAEVRV 243

Query: 242  CAFDIETTKLPLKFPDADYDIIMMISYMLDGQGYLIINRE---CVGEDIEDLEYTPKPEF 298
            CAFDIETTKLPLKFPDA+YD IMMISYM+DGQG+LIINRE   CVGED+EDLEYTPKPEF
Sbjct: 244  CAFDIETTKLPLKFPDAEYDQIMMISYMVDGQGFLIINREVTACVGEDVEDLEYTPKPEF 303

Query: 299  EGYFKVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELG 358
            EGYFKVTNV NE+ELL+ WF HMQE+KPGIYVTYNGD+FDWPF+E RA+HHG KM+EELG
Sbjct: 304  EGYFKVTNVKNEVELLQRWFYHMQELKPGIYVTYNGDFFDWPFIERRASHHGIKMNEELG 363

Query: 359  FQCDKNQGECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRF 418
            F+CD+NQGECRAKFACHLDCFAWVKRDSYLPQGS GLKAVTKAKLGYDPLEVNPEDMVRF
Sbjct: 364  FRCDQNQGECRAKFACHLDCFAWVKRDSYLPQGSHGLKAVTKAKLGYDPLEVNPEDMVRF 423

Query: 419  AKEKPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMV 478
            A EKPQ MASYSVSDAVATYYLYMTYV+PFIFSLATIIPM PDEVLRKGSGTLCEMLLMV
Sbjct: 424  AMEKPQTMASYSVSDAVATYYLYMTYVNPFIFSLATIIPMVPDEVLRKGSGTLCEMLLMV 483

Query: 479  ---------QAYKANVICPNKHQSDPEKFYRNHLLESETYIGGHVECLESGVFRSDLPTS 529
                     QAYKANV+CPNK+Q+DPEKFY+N LLESETYIGGHVECLESG         
Sbjct: 484  EVSTYLPQAQAYKANVVCPNKNQADPEKFYQNQLLESETYIGGHVECLESG--------- 534

Query: 530  FKLDPSAYEQLLNNLDRDLQYAIKVEGKMDLESVSNYDEVKNAIMEKLLRLQEEPIREEC 589
                     QL++NL RDL+YAI VEGKM ++S+SNYDEVK+ I EKL +L+++PIREE 
Sbjct: 535  ---------QLIDNLGRDLEYAITVEGKMRMDSISNYDEVKDEIKEKLEKLRDDPIREEG 585

Query: 590  PLIYHLDVAAMYPNIILTNRLQ-----PPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGE 644
            PLIYHLDVAAMYPNIILTNRLQ     PPSIVTDE+CTACDFNRPGKTCLRKLEWVWRG 
Sbjct: 586  PLIYHLDVAAMYPNIILTNRLQVHLISPPSIVTDEICTACDFNRPGKTCLRKLEWVWRGV 645

Query: 645  IFMGKRSDYYHLKKQIESEFVD-GTNGHLSKSFLDLPKMEQQSRLKDRLKKYCQKAYKRV 703
             FMGK+SDYYHLKKQIESEFVD G N   SKSFLDLPK++QQS+LK+RLKKYCQKAYKRV
Sbjct: 646  TFMGKKSDYYHLKKQIESEFVDAGANIMSSKSFLDLPKVDQQSKLKERLKKYCQKAYKRV 705

Query: 704  LDKPVTELREAGICMRENSFYVDTVRSFRDRRYEYKGLNKVWKGKLSEAKASGNSIKIQE 763
            LDKP+TE+REAGICMREN FYVDTVRSFRDRRYEYK LNKVWKGKLSEAKASGNSIKIQE
Sbjct: 706  LDKPITEVREAGICMRENPFYVDTVRSFRDRRYEYKTLNKVWKGKLSEAKASGNSIKIQE 765

Query: 764  AQDMVVLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKI 823
            AQDMVV+YDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIE+I
Sbjct: 766  AQDMVVVYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIERI 825

Query: 824  GKPLELDTDGIWCVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLV 883
            GKPLELDTDGIWC LPGSFPENFTFKT D+ KKLTISYPCVMLNVDVA+NNTNDQYQTLV
Sbjct: 826  GKPLELDTDGIWCCLPGSFPENFTFKTIDM-KKLTISYPCVMLNVDVAKNNTNDQYQTLV 884

Query: 884  DPVSKTYETHSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIK 943
            DPV KTY++HSECSIEFEVDGPYKAMI+PASKEEGILIKKRYAVFN DGTLAELKGFEIK
Sbjct: 885  DPVRKTYKSHSECSIEFEVDGPYKAMIIPASKEEGILIKKRYAVFNHDGTLAELKGFEIK 944

Query: 944  RRGELKLIKVFQAELFDKFLHGSTIEECYSAVAAVANRWLDLLD---------------- 987
            RRGELKLIKVFQAELFDKFLHGST+EECYSAVAAVA+RWLDLLD                
Sbjct: 945  RRGELKLIKVFQAELFDKFLHGSTLEECYSAVAAVADRWLDLLDVCEISCFFWVIYLIGF 1004

Query: 988  ------NQGKDIADSELIDYISESSTMSKSLADYGEQKSCAVTTARRLSDFLGDTMVKDK 1041
                  NQGKDIADSEL+DYISESSTMSKSLADYGEQKSCAVTTA+RL++FLG TMVKDK
Sbjct: 1005 LSHFLQNQGKDIADSELLDYISESSTMSKSLADYGEQKSCAVTTAKRLAEFLGVTMVKDK 1064

Query: 1042 GLRCQYIVACEPQGTPVSERAVPVAIFETDAEIMKFYLRKWCKTSSDVGIRSIVDWSYYK 1101
            GLRCQYIVACEP+GTPVSERAVPVAIF T+ E+MKF+LRKWCKTSSDVGIR I+DWSYYK
Sbjct: 1065 GLRCQYIVACEPKGTPVSERAVPVAIFTTNPEVMKFHLRKWCKTSSDVGIRLIIDWSYYK 1124

Query: 1102 QRLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLYKKVREKEDKFRQRKLVDIFSSLKKDD 1161
            QRLSSAIQK+ITIPAAMQKV+NPVPRV+HPDWL+KKVREK+DKFRQRKLVD+FSS  KD 
Sbjct: 1125 QRLSSAIQKVITIPAAMQKVANPVPRVLHPDWLHKKVREKDDKFRQRKLVDMFSSANKDV 1184

Query: 1162 FLNKTCNAETNLMDENVEDLEDFPKKRRNSVNGPRPIVRCFEVNNEQKTVKTTDQVDSLR 1221
             L    + +  +  +NVED+EDF K+ R SV GP+PI R +EVN +Q   +  +  D   
Sbjct: 1185 VL----DTDLPVTKDNVEDIEDFCKENRPSVKGPKPIARSYEVNKKQSECEQQESWD--- 1237

Query: 1222 QQLEPSEVSDQQPSSQNAIDTENIDRIVDYKGWLELKKRKWKDNLDRRKKQKLGSLRASH 1281
                 +E  D        I  +NID+ V+Y+GWLELKKRKWK  L+++KK++LG LR+S+
Sbjct: 1238 -----TEFHD--------ISFQNIDKSVNYQGWLELKKRKWKVTLEKKKKRRLGDLRSSN 1284

Query: 1282 QANGVSESLGDMINHKEAQRRTGVGSYFRRQETAMTRCHWQ---IIQLVPSSQSGVFLAW 1338
            Q +         IN K  Q R GVGSYFRR E A+T  HWQ   IIQLVPS QSG F AW
Sbjct: 1285 QVD------THEINQKVGQGRGGVGSYFRRPEEALTSSHWQVCTIIQLVPSPQSGQFFAW 1338

Query: 1339 VVVEGIMVRIPITVPRLFYLNSKDPIVEKFPGRRVNKTLPHGRRSFNLIE--VMIDEDQF 1396
            VVVEG+M++IP+++PR+FY+NSK PI E F G+ VNK LPHGR  ++L E  V I EDQF
Sbjct: 1339 VVVEGLMLKIPLSIPRVFYINSKVPIDEYFQGKCVNKILPHGRPCYSLTEACVKIQEDQF 1398

Query: 1397 RKESKKLAALLADPEVE 1413
            +KESKK AALLADP VE
Sbjct: 1399 KKESKKRAALLADPGVE 1415



 Score =  566 bits (1458), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 315/676 (46%), Positives = 408/676 (60%), Gaps = 109/676 (16%)

Query: 1409 DPEVEVLGWQQNAAKIGMQRCAASSQWFNERISLARYAHI-------------------- 1448
            D   + + WQ+ AAKI M RCAA+ QW + RI+ +RYAH+                    
Sbjct: 1601 DNSYQPVSWQRPAAKIAMFRCAAAFQWLDRRITQSRYAHVPLGNFGLDWLTFTIDIFLSR 1660

Query: 1449 --------LWISDDGVPDLGGTSEEDECFADEVHQPVLTYPGAYRKVSVELKIHHLSVNA 1500
                    LW+SD+GVPDLGG + E+  FADEV Q  L +PGAYRKVSVELKIH+L+VNA
Sbjct: 1661 ALRDQQQVLWVSDNGVPDLGGINNEEAFFADEVQQTSLVFPGAYRKVSVELKIHNLAVNA 1720

Query: 1501 LLKSNQVNEMEGGGLFGFDQDMNS-GPYNNELCGFDETTSSAPAFRVVKQLIQRCLTDAV 1559
            LLKSN VNEMEGGG  GF+QD+N  G  +N+   FDETT  A AFRV+KQLI  CLTD  
Sbjct: 1721 LLKSNLVNEMEGGGFMGFEQDVNPRGINSNDNTSFDETTGCAQAFRVLKQLIHSCLTDVR 1780

Query: 1560 TSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEFRKLGATIIFAN 1619
             S N++AD+ILQ L  WLCSP SKLHDP LH +LHKVMQKVFA+LL + R+LGA II+A+
Sbjct: 1781 KSKNIYADSILQRLSWWLCSPSSKLHDPALHLMLHKVMQKVFALLLTDLRRLGAIIIYAD 1840

Query: 1620 FSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELE----PVHFWHSLLFMD----- 1670
            FSKVIIDT KFDLSAAKAYC+SLL  ++ R +   +++       H  HS    D     
Sbjct: 1841 FSKVIIDTVKFDLSAAKAYCESLLSTVRNRLVSSLLDIHVYDLKSHGLHSFSCHDFCASP 1900

Query: 1671 -QYNYGGIPARADESLDDDSQVDIVSSWNIAEYLP---------------------KEIQ 1708
              YNY GI A  + SLD   +V I   W++A +LP                     K + 
Sbjct: 1901 LTYNYAGIRADDEISLD---EVTIEPKWSVARHLPEYIEVWRQNPHSNQCSFSENKKHVA 1957

Query: 1709 DH--FVLVVSEFMYIPWKHAQKLAASRASLQEGSSCTPSITVAAAENFESHIVQYVKGEI 1766
             H  F L    F ++ W+    +  ++           +    ++E+ E+ +++Y++ +I
Sbjct: 1958 THGPFFLDTDAF-HLSWQRDFIIIIAKFIFDPWKFAIEN-KKGSSESLEAQMIEYLREQI 2015

Query: 1767 SSYFTGKLLSIVRDAIHHMKKMNNDQHNSPGVMQTAANIHKVDAPLEFIKHVCAAFALDQ 1826
             S F   L+  V D + HMK++N    +     + +    K D  LEFI+ + A  ALDQ
Sbjct: 2016 GSTFINMLVKKVDDIMSHMKEINVSDAS-----RVSGQAPKGDYSLEFIQVISAVLALDQ 2070

Query: 1827 NVQHDVL------------------------------------VMRKNLLKYVRVREFAP 1850
            NVQ DVL                                    VMRK+LLKY++V+E A 
Sbjct: 2071 NVQQDVLLKTLFITDFIHKSNLISGNVVLETMFTNRAGFFFEWVMRKSLLKYIKVKECAA 2130

Query: 1851 EAEFRDPCPSFILPNVICSYCNDCRDLDLCRDMALLAQ-DWHCAMPQCGQPYDREVMENA 1909
            EAEF DP PSFILPNV CS C+  RDLD+CRD ALL + +W CA  QCG+ YDRE ME++
Sbjct: 2131 EAEFLDPGPSFILPNVACSNCDAYRDLDICRDPALLTEKEWSCADTQCGKIYDREQMESS 2190

Query: 1910 LLQIVRQRERLYHLQDLVCIRCNQVKAAHLAEQCACAGSFRCKEDASDFRSKMQIFLNIA 1969
            LL++VRQRER+YH+QD+VCIRCNQVKAAHL EQC C+GSFRCKE  S+F  +M+IF++IA
Sbjct: 2191 LLEMVRQRERMYHMQDVVCIRCNQVKAAHLTEQCECSGSFRCKESGSEFSKRMEIFMDIA 2250

Query: 1970 NRQGFQLLQECTSWIL 1985
             RQ F+LL+E  SWI+
Sbjct: 2251 KRQKFRLLEEYISWII 2266


>gi|297822323|ref|XP_002879044.1| hypothetical protein ARALYDRAFT_901556 [Arabidopsis lyrata subsp.
            lyrata]
 gi|297324883|gb|EFH55303.1| hypothetical protein ARALYDRAFT_901556 [Arabidopsis lyrata subsp.
            lyrata]
          Length = 2138

 Score = 2224 bits (5762), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 1074/1393 (77%), Positives = 1205/1393 (86%), Gaps = 30/1393 (2%)

Query: 22   SAEEELEAKLGYDLFSEGDKRLGWLLTFASSSLEDEDTRKVYSCIDLYFVSQDGSTFKSK 81
            SA +ELE KLG+ LFS+G+ RLGWLLTFASSS ED DT K +SC+DL+FV+QDGS+FK+K
Sbjct: 5    SAADELETKLGFGLFSQGETRLGWLLTFASSSWEDADTGKTFSCVDLFFVTQDGSSFKTK 64

Query: 82   YKFRPYFYAATKEKMEMDVEAYLRRRYESQIADIEILEKEDLDLKNHLSGLHKSYLKISF 141
            YKFRPY YAATK+ ME++VEAYLRRRY++Q+ADI+I+ KEDLDLKNHLSGL K YLK+SF
Sbjct: 65   YKFRPYLYAATKDNMELEVEAYLRRRYQTQVADIQIVHKEDLDLKNHLSGLQKKYLKVSF 124

Query: 142  DTVQQLMDVKKDLLHVVERNQAKFDAAEAYESILTGKREQRPQDFLDCIVDLREYDVPYH 201
            DTVQQL++VK+DLLH+VERN AKFDA EAYESIL GKREQRPQD LD +VDLREYDVPYH
Sbjct: 125  DTVQQLVEVKRDLLHIVERNLAKFDAFEAYESILAGKREQRPQDCLDSVVDLREYDVPYH 184

Query: 202  IRFAIDNDVRCGQWYDVSISSTGPLLEKRVDLLQRAEVHVCAFDIETTKLPLKFPDADYD 261
            +RFAIDNDVR GQWY+VSISST  +LEKR DLLQRAEV VCAFDIET KLPLKFPDA+YD
Sbjct: 185  VRFAIDNDVRSGQWYNVSISSTDVILEKRTDLLQRAEVRVCAFDIETVKLPLKFPDAEYD 244

Query: 262  IIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNVNNEIELLRLWFAHM 321
             IMMISYM+DGQG+LI NRECVG+DIEDLEYTPKPEFEGYFKVTNVNNE+ELLR WF+HM
Sbjct: 245  QIMMISYMVDGQGFLITNRECVGKDIEDLEYTPKPEFEGYFKVTNVNNEVELLRKWFSHM 304

Query: 322  QEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDKNQGECRAKFACHLDCFAW 381
            QE+KPGIYVTYNGD+FDWPF+E RA+HHG KM+EELGF+CD NQGECRAKF CHLDCF+W
Sbjct: 305  QELKPGIYVTYNGDFFDWPFIERRASHHGIKMNEELGFRCDHNQGECRAKFVCHLDCFSW 364

Query: 382  VKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQMMASYSVSDAVATYYLY 441
            VKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFA EKPQ MASYSVSDAVATYYLY
Sbjct: 365  VKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAMEKPQTMASYSVSDAVATYYLY 424

Query: 442  MTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVICPNKHQSDPEKFYRN 501
            MTYVHPF+FSLATIIPM PDEVLRKGSGTLCEMLLMV+AYKANV+CPNK+Q+DPEKFY+ 
Sbjct: 425  MTYVHPFVFSLATIIPMVPDEVLRKGSGTLCEMLLMVEAYKANVVCPNKNQADPEKFYQG 484

Query: 502  HLLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQLLNNLDRDLQYAIKVEGKMDLE 561
             LLESETYIGGHVECL+SGVFRSD+PTSFKLD SAY+QL++NL RDL+YAI VEGKM ++
Sbjct: 485  KLLESETYIGGHVECLQSGVFRSDIPTSFKLDASAYQQLIDNLGRDLEYAITVEGKMKMD 544

Query: 562  SVSNYDEVKNAIMEKLLRLQEEPIREECPLIYHLDVAAMYPNIILTNRLQPPSIVTDEVC 621
            S+SNYDEV++ I EKL +L+++PIREE PLIYHLDVAAMYPNIILTNRLQPPSIVTDEVC
Sbjct: 545  SISNYDEVEDVIREKLEKLRDDPIREEGPLIYHLDVAAMYPNIILTNRLQPPSIVTDEVC 604

Query: 622  TACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYYHLKKQIESEFVD-GTNGHLSKSFLDLP 680
            TACDFN P KTCLRKLEWVWRG  F G +S+YYHLKKQIESE VD G N   SK FLDLP
Sbjct: 605  TACDFNGPEKTCLRKLEWVWRGVTFKGNKSEYYHLKKQIESESVDAGANMQSSKPFLDLP 664

Query: 681  KMEQQSRLKDRLKKYCQKAYKRVLDKPVTELREAGICMRENSFYVDTVRSFRDRRYEYKG 740
            K+EQQS+LK+RLKKYCQKAY RVLDKP TE+REAGICMREN FYVDTVRSFRDRRYEYK 
Sbjct: 665  KVEQQSKLKERLKKYCQKAYSRVLDKPFTEVREAGICMRENPFYVDTVRSFRDRRYEYKT 724

Query: 741  LNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHKCILNSFYGYVMRKGARWYSME 800
            LNKVWKGKLSEAKASGNSIKIQEA DMVV+YDSLQLAHKCILNSFYGYVMRKGARWYSME
Sbjct: 725  LNKVWKGKLSEAKASGNSIKIQEAHDMVVVYDSLQLAHKCILNSFYGYVMRKGARWYSME 784

Query: 801  MAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLPGSFPENFTFKTKDLKKKLTIS 860
            MAGVVTYTGAKIIQNARLLIE+IGKPLELDTDGIWC LPGSFPENFTFKT D+ KK TIS
Sbjct: 785  MAGVVTYTGAKIIQNARLLIERIGKPLELDTDGIWCALPGSFPENFTFKTIDM-KKFTIS 843

Query: 861  YPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEFEVDGPYKAMILPASKEEGIL 920
            YPCV+LNVDVA+NN+NDQYQTLVDPV KTY +HSECSIEFEVDGPYKAMI+PASKEEGIL
Sbjct: 844  YPCVILNVDVAKNNSNDQYQTLVDPVRKTYNSHSECSIEFEVDGPYKAMIIPASKEEGIL 903

Query: 921  IKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFLHGSTIEECYSAVAAVAN 980
            IKKRYAVFN DGT+AELKGFE+KRRGELKLIKVFQAELFDKFLHGST+EECYSAVAAVA+
Sbjct: 904  IKKRYAVFNHDGTIAELKGFEMKRRGELKLIKVFQAELFDKFLHGSTLEECYSAVAAVAD 963

Query: 981  RWLDLLDNQGKDIADSELIDYISESSTMSKSLADYGEQKSCAVTTARRLSDFLGDTMVKD 1040
            RWLDLL+ QGK IADSEL+DYISESSTMSKSLADYG+QKSCAVTTA+RL+DFLGDTMVKD
Sbjct: 964  RWLDLLEGQGKYIADSELLDYISESSTMSKSLADYGQQKSCAVTTAKRLADFLGDTMVKD 1023

Query: 1041 KGLRCQYIVACEPQGTPVSERAVPVAIFETDAEIMKFYLRKWCKTSSDVGIRSIVDWSYY 1100
            KGLRCQYIVA EP+GTPVSERAVPVAIF+TD    KFYL+KWCK SS  GIRSI+DW YY
Sbjct: 1024 KGLRCQYIVAREPEGTPVSERAVPVAIFKTDDPEKKFYLQKWCKISSYTGIRSIIDWRYY 1083

Query: 1101 KQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLYKKVREKEDKFRQRKLVDIFSSLKKD 1160
            KQRL SAIQK+ITIPAAMQKV+NPV RV HP+WL KKV    DKFRQ K+VD+FSS  KD
Sbjct: 1084 KQRLHSAIQKVITIPAAMQKVANPVLRVRHPNWLEKKV---SDKFRQGKIVDMFSSANKD 1140

Query: 1161 DFLNKTCNAETNLMDENVEDLEDFPKKRRNSVNGPRPIVRCFEVNNEQKTVKTTDQVDSL 1220
              L+K     +   D  + D+EDF K+ R SV GP+P+   +EV+      K  +  D  
Sbjct: 1141 GVLDKN---HSTTQDNVLADIEDFCKENRPSVKGPKPVAHSYEVDRNHSEGKQQESWD-- 1195

Query: 1221 RQQLEPSEVSDQQPSSQNAIDTENIDRIVDYKGWLELKKRKWKDNLDRRKKQKLGSLRAS 1280
                   E  D        I  +N+D+ VDY+GWLEL+KRKWK  L  +KK++   L+  
Sbjct: 1196 ------PEFHD--------ISFQNVDKNVDYQGWLELEKRKWKMTLKNKKKRRFDDLKPC 1241

Query: 1281 HQANGVSESLGDMINHKEAQRRTGVGSYFRRQETAMTRCHWQIIQLVPSSQSGVFLAWVV 1340
            +Q +         IN K  + R GVGSYFRR E A+T  + QIIQLV S QSG F AWVV
Sbjct: 1242 NQID------AHKINKKVCKGRAGVGSYFRRPEEALTSSYLQIIQLVQSPQSGQFFAWVV 1295

Query: 1341 VEGIMVRIPITVPRLFYLNSKDPIVEKFPGRRVNKTLPHGRRSFNLIEVMIDEDQFRKES 1400
            VEG+M++IP+T+PR+FY+NSK  I   F G+ +NK LPHG+  +NL+EV I EDQF+KES
Sbjct: 1296 VEGLMLKIPLTIPRVFYINSKASIAGNFTGKCINKILPHGKPCYNLMEVNIQEDQFKKES 1355

Query: 1401 KKLAALLADPEVE 1413
            KKLAALLADPE+E
Sbjct: 1356 KKLAALLADPEIE 1368



 Score =  625 bits (1611), Expect = e-175,   Method: Compositional matrix adjust.
 Identities = 319/607 (52%), Positives = 407/607 (67%), Gaps = 57/607 (9%)

Query: 1409 DPEVEVLGWQQNAAKIGMQRCAASSQWFNERISLARYAHI-------------------- 1448
            D   + + WQ+ AAKI + RCA++ QW + RI+ +RYAH+                    
Sbjct: 1554 DNSYQPVSWQRPAAKIAVFRCASAIQWLDRRIAQSRYAHVPLGNFGRDWLTFTVDIFLSR 1613

Query: 1449 --------LWISDDGVPDLGGTSEEDECFADEVHQPVLTYPGAYRKVSVELKIHHLSVNA 1500
                    LW+SD+GVPDLG  + E+   ADE     L +PGAYRKVSVELK+H L+VNA
Sbjct: 1614 ALRDEQQVLWVSDNGVPDLGDINNEETFLADETS---LLFPGAYRKVSVELKVHRLAVNA 1670

Query: 1501 LLKSNQVNEMEGGGLFGFDQDMNS-GPYNNELCGFDETTSSAPAFRVVKQLIQRCLTDAV 1559
            LLKS+ V+EMEGG   GF+Q +NS G   N+   FDE    A AFRV+KQLI+R L DA 
Sbjct: 1671 LLKSDLVSEMEGGSFLGFEQGVNSRGSSLNDNGSFDENNGCAQAFRVLKQLIKRLLHDAC 1730

Query: 1560 TSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEFRKLGATIIFAN 1619
             SGN++AD+ILQHL  WL SP SKLHDP LH +LHKVMQKVFA+LL + R+LGA II+A+
Sbjct: 1731 KSGNIYADSILQHLSWWLRSPSSKLHDPALHLMLHKVMQKVFALLLTDLRRLGAIIIYAD 1790

Query: 1620 FSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLFMDQYNYGGIPA 1679
            FSKVIIDTGKFDLSAAK YC+SLL  + +R++F+WI LEPVH+WHSLLFMDQ+NY GI A
Sbjct: 1791 FSKVIIDTGKFDLSAAKTYCESLLTVMGSRDIFKWILLEPVHYWHSLLFMDQHNYAGIRA 1850

Query: 1680 RADESLDDDSQVDIVSSWNIAEYLPKEIQDHFVLVVSEFMYIPWKHAQKLAASRASLQEG 1739
              DE   D  +V I   W++A +LP+ IQ  F+++V+ F++ PWK A +           
Sbjct: 1851 TEDEISGD--EVTIEPKWSVARHLPEYIQKDFIIIVATFIFGPWKFALEKKW-------- 1900

Query: 1740 SSCTPSITVAAAENFESHIVQYVKGEISSYFTGKLLSIVRDAIHHMKKMNNDQHNSPGVM 1799
                      +AE+ E+ +V+Y+K +I + F   ++  + +   HM  +N    +     
Sbjct: 1901 ---------GSAESLEADMVEYLKEQIGTRFISMIVEKIGNIRSHMMDINVSDAS----- 1946

Query: 1800 QTAANIHKVDAPLEFIKHVCAAFALDQNVQHDVLVMRKNLLKYVRVREFAPEAEFRDPCP 1859
              +    K D   EFI+ + A  ALDQNVQ DVLVMRK+LLKY++V+E A EA F DP P
Sbjct: 1947 WASGQAPKGDYTFEFIQIITAVLALDQNVQQDVLVMRKSLLKYIKVKECAAEAGFIDPGP 2006

Query: 1860 SFILPNVICSYCNDCRDLDLCRDMALLAQ-DWHCAMPQCGQPYDREVMENALLQIVRQRE 1918
            SFILPNV CS C   RDLD CRD ALL + +W CA PQCG+ YD+E MEN+L+Q+VRQRE
Sbjct: 2007 SFILPNVACSNCGAYRDLDFCRDPALLTEKEWSCADPQCGKIYDKEQMENSLVQMVRQRE 2066

Query: 1919 RLYHLQDLVCIRCNQVKAAHLAEQCACAGSFRCKEDASDFRSKMQIFLNIANRQGFQLLQ 1978
            R+Y LQDLVC RCNQVKAAHL EQC C+GSFRCKE  SDF  +M+IFL+IA R  F+LL+
Sbjct: 2067 RMYQLQDLVCNRCNQVKAAHLTEQCECSGSFRCKESGSDFHKRMEIFLDIAKRLKFRLLE 2126

Query: 1979 ECTSWIL 1985
            EC SWIL
Sbjct: 2127 ECISWIL 2133


>gi|42569372|ref|NP_180280.2| DNA polymerase epsilon subunit 1 [Arabidopsis thaliana]
 gi|426019688|sp|F4IFN6.1|DPOE2_ARATH RecName: Full=DNA polymerase epsilon catalytic subunit B; AltName:
            Full=DNA polymerase 2 b; Short=AtPOL2b; AltName: Full=DNA
            polymerase II subunit b; AltName: Full=Protein TILTED 2
 gi|330252846|gb|AEC07940.1| DNA polymerase epsilon subunit 1 [Arabidopsis thaliana]
          Length = 2138

 Score = 2212 bits (5731), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 1079/1414 (76%), Positives = 1206/1414 (85%), Gaps = 43/1414 (3%)

Query: 1    MDRRRWDRQDGRRTKKQKLIRSAEEELEAKLGYDLFSEGDKRLGWLLTFASSSLEDEDTR 60
            M  RR DR    R   QK+  SA +ELE KLG+ LFS+G+ RLGWLLTFASSS ED DT 
Sbjct: 1    MSGRRCDR----RLNVQKV--SAADELETKLGFGLFSQGETRLGWLLTFASSSWEDADTG 54

Query: 61   KVYSCIDLYFVSQDGSTFKSKYKFRPYFYAATKEKMEMDVEAYLRRRYESQIADIEILEK 120
            K +SC+DL+FV+QDGS+FK+KYKFRPY YAATK+ ME++VEAYLRRRYE Q+ADI+I+ K
Sbjct: 55   KTFSCVDLFFVTQDGSSFKTKYKFRPYLYAATKDNMELEVEAYLRRRYERQVADIQIVHK 114

Query: 121  EDLDLKNHLSGLHKSYLKISFDTVQQLMDVKKDLLHVVERNQAKFDAAEAYESILTGKRE 180
            EDL LKNHLSGL K YLK+SFDTVQQL++VK+DLLH+VERN AKF+A EAYESIL+GKRE
Sbjct: 115  EDLYLKNHLSGLQKKYLKVSFDTVQQLVEVKRDLLHIVERNLAKFNALEAYESILSGKRE 174

Query: 181  QRPQDFLDCIVDLREYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLLEKRVDLLQRAEVH 240
            QRPQD LD +VDLREYDVPYH+RFAIDNDVR GQWY+VSISST  +LEKR DLLQRAEV 
Sbjct: 175  QRPQDCLDSVVDLREYDVPYHVRFAIDNDVRSGQWYNVSISSTDVILEKRTDLLQRAEVR 234

Query: 241  VCAFDIETTKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEG 300
            VCAFDIET KLPLKFPDA+YD IMMISYM+DGQG+LI NRECVG+DIEDLEYTPKPEFEG
Sbjct: 235  VCAFDIETVKLPLKFPDAEYDQIMMISYMVDGQGFLITNRECVGKDIEDLEYTPKPEFEG 294

Query: 301  YFKVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQ 360
            YFKVTNV NE+ELLR WF+HMQE+KPGIYVTYNGD+FDWPF+E RA+HHG KM+EELGF+
Sbjct: 295  YFKVTNVTNEVELLRKWFSHMQELKPGIYVTYNGDFFDWPFIERRASHHGIKMNEELGFR 354

Query: 361  CDKNQGECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAK 420
            CD+NQGECRAKF CHLDCF+WVKRDSYLPQGSQGLKAVTK KLGYDPLEVNPEDMVRFA 
Sbjct: 355  CDQNQGECRAKFVCHLDCFSWVKRDSYLPQGSQGLKAVTKVKLGYDPLEVNPEDMVRFAM 414

Query: 421  EKPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQA 480
            EKPQ MASYSVSDAVATYYLYMTYVHPF+FSLATIIPM PDEVLRKGSGTLCEMLLMV+A
Sbjct: 415  EKPQTMASYSVSDAVATYYLYMTYVHPFVFSLATIIPMVPDEVLRKGSGTLCEMLLMVEA 474

Query: 481  YKANVICPNKHQSDPEKFYRNHLLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQL 540
            YKANV+CPNK+Q+DPEKFY+  LLESETYIGGHVECL+SGVFRSD+PTSFKLD SAY+QL
Sbjct: 475  YKANVVCPNKNQADPEKFYQGKLLESETYIGGHVECLQSGVFRSDIPTSFKLDASAYQQL 534

Query: 541  LNNLDRDLQYAIKVEGKMDLESVSNYDEVKNAIMEKLLRLQEEPIREECPLIYHLDVAAM 600
            ++NL RDL+YAI VEGKM ++SVSN+DEVK  I EKL +L+++PIREE PLIYHLDVAAM
Sbjct: 535  IDNLGRDLEYAITVEGKMRMDSVSNFDEVKEVIREKLEKLRDDPIREEGPLIYHLDVAAM 594

Query: 601  YPNIILTNRLQPPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYYHLKKQI 660
            YPNIILTNRLQPPSIVTDEVCTACDFN P KTCLRKLEWVWRG  F G +S+YYHLKKQI
Sbjct: 595  YPNIILTNRLQPPSIVTDEVCTACDFNGPEKTCLRKLEWVWRGVTFKGNKSEYYHLKKQI 654

Query: 661  ESEFVD-GTNGHLSKSFLDLPKMEQQSRLKDRLKKYCQKAYKRVLDKPVTELREAGICMR 719
            ESE VD G N   SK FLDLPK+EQQS+LK+RLKKYCQKAY RVLDKP+TE+REAGICMR
Sbjct: 655  ESESVDAGANMQSSKPFLDLPKVEQQSKLKERLKKYCQKAYSRVLDKPITEVREAGICMR 714

Query: 720  ENSFYVDTVRSFRDRRYEYKGLNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHK 779
            EN FYVDTVRSFRDRRYEYK LNKVWKGKLSEAKASGN IKIQEA DMVV+YDSLQLAHK
Sbjct: 715  ENPFYVDTVRSFRDRRYEYKTLNKVWKGKLSEAKASGNLIKIQEAHDMVVVYDSLQLAHK 774

Query: 780  CILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLP 839
            CILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIE+IGKPLELDTDGIWC LP
Sbjct: 775  CILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIERIGKPLELDTDGIWCALP 834

Query: 840  GSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIE 899
            GSFPENFTFKT D+ KK TISYPCV+LNVDVA+NN+NDQYQTLVDPV KTY + SECSIE
Sbjct: 835  GSFPENFTFKTIDM-KKFTISYPCVILNVDVAKNNSNDQYQTLVDPVRKTYNSRSECSIE 893

Query: 900  FEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELF 959
            FEVDGPYKAMI+PASKEEGILIKKRYAVFN DGT+AELKGFE+KRRGELKLIKVFQAELF
Sbjct: 894  FEVDGPYKAMIIPASKEEGILIKKRYAVFNHDGTIAELKGFEMKRRGELKLIKVFQAELF 953

Query: 960  DKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLADYGEQK 1019
            DKFLHGST+EECYSAVAAVANRWLDLL+ QGKDIADSEL+DYISESSTMSKSLADYG+QK
Sbjct: 954  DKFLHGSTLEECYSAVAAVANRWLDLLEGQGKDIADSELLDYISESSTMSKSLADYGQQK 1013

Query: 1020 SCAVTTARRLSDFLGDTMVKDKGLRCQYIVACEPQGTPVSERAVPVAIFETDAEIMKFYL 1079
            SCAVTTA+RL+DFLGDTMVKDKGLRCQYIVA EP+GTPVSERAVPVAIF+TD    KFYL
Sbjct: 1014 SCAVTTAKRLADFLGDTMVKDKGLRCQYIVAREPEGTPVSERAVPVAIFQTDDPEKKFYL 1073

Query: 1080 RKWCKTSSDVGIRSIVDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLYKKVR 1139
            +KWCK SS  GIRSI+DW YYKQRL SAIQK+ITIPAAMQKV+NPV RV HP WL KKV 
Sbjct: 1074 QKWCKISSYTGIRSIIDWMYYKQRLHSAIQKVITIPAAMQKVANPVLRVRHPYWLEKKVC 1133

Query: 1140 EKEDKFRQRKLVDIFSSLKKDDFLNKTCNAETNLMDENVEDLEDFPKKRRNSVNGPRPIV 1199
               DKFRQ K+VD+FSS  KD          +   D  V D+E+F K+ R SV GP+P+ 
Sbjct: 1134 ---DKFRQGKIVDMFSSANKD---------HSTTQDNVVADIEEFCKENRPSVKGPKPVA 1181

Query: 1200 RCFEVNNEQKTVKTTDQVDSLRQQLEPSEVSDQQPSSQNAIDTENIDRIVDYKGWLELKK 1259
            R FEV+      K  +  D         E  D        I  +N+D+ VDY+GWLEL+K
Sbjct: 1182 RSFEVDRNHSEGKQQESWD--------PEFHD--------ISLQNVDKNVDYQGWLELEK 1225

Query: 1260 RKWKDNLDRRKKQKLGSLRASHQANGVSESLGDMINHKEAQRRTGVGSYFRRQETAMTRC 1319
            RKWK  L  +KK++       + ++     L   IN K  + R GVGSYFRR E A+T  
Sbjct: 1226 RKWKMTLTNKKKRR-------YSSSLFGFDLEQNINKKVCKGRVGVGSYFRRPEEALTSS 1278

Query: 1320 HWQIIQLVPSSQSGVFLAWVVVEGIMVRIPITVPRLFYLNSKDPIVEKFPGRRVNKTLPH 1379
            + QIIQLV S QSG F AWVVVEG+M++IP+T+PR+FY+NSK  I   F G+ +NK LPH
Sbjct: 1279 YLQIIQLVQSPQSGQFFAWVVVEGLMLKIPLTIPRVFYINSKASIAGNFTGKCINKILPH 1338

Query: 1380 GRRSFNLIEVMIDEDQFRKESKKLAALLADPEVE 1413
            G+  +NL+EV I EDQF KESKKLAALLADPE+E
Sbjct: 1339 GKPCYNLMEVNIQEDQFIKESKKLAALLADPEIE 1372



 Score =  613 bits (1580), Expect = e-172,   Method: Compositional matrix adjust.
 Identities = 314/606 (51%), Positives = 405/606 (66%), Gaps = 59/606 (9%)

Query: 1409 DPEVEVLGWQQNAAKIGMQRCAASSQWFNERISLARYAHI-------------------- 1448
            D   + + WQ+ AAKI + RCA++ QW + RI+ +RYAH+                    
Sbjct: 1558 DNSYQPVSWQRPAAKIAVLRCASAIQWLDRRIAQSRYAHVPLGNFGRDWLTFTVDIFLSR 1617

Query: 1449 --------LWISDDGVPDLGGTSEEDECFADEVHQPVLTYPGAYRKVSVELKIHHLSVNA 1500
                    LW+SD+GVPDLG  + E+   ADE     L +PGAYRKVSVELK+H L+VNA
Sbjct: 1618 ALRDQQQVLWVSDNGVPDLGDINNEETFLADETS---LLFPGAYRKVSVELKVHRLAVNA 1674

Query: 1501 LLKSNQVNEMEGGGLFGFDQDMNSGPYNNELCGFDETTSSAPAFRVVKQLIQRCLTDAVT 1560
            LLKS+ V+EMEGGG  G +   + G   N+   FDE    A AFRV+KQLI+R L DA  
Sbjct: 1675 LLKSDLVSEMEGGGFLGVN---SRGSSLNDNGSFDENNGCAQAFRVLKQLIKRLLHDACN 1731

Query: 1561 SGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEFRKLGATIIFANF 1620
            SGN++AD+ILQHL  WL SP SKLHDP LH +LHKVMQKVFA+LL + R+LGA II+A+F
Sbjct: 1732 SGNIYADSILQHLSWWLRSPSSKLHDPALHLMLHKVMQKVFALLLTDLRRLGAIIIYADF 1791

Query: 1621 SKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLFMDQYNYGGIPAR 1680
            SKVIIDTGKFDLSAAK YC+SLL  + +R++F+ I LEPVH+WHSLLFMDQ+NY GI A 
Sbjct: 1792 SKVIIDTGKFDLSAAKTYCESLLTVMGSRDIFKLILLEPVHYWHSLLFMDQHNYAGIRAT 1851

Query: 1681 ADESLDDDSQVDIVSSWNIAEYLPKEIQDHFVLVVSEFMYIPWKHAQKLAASRASLQEGS 1740
             DE     ++V I   W++A +LP+ IQ  F+++V+ F++ PWK A  L   R S     
Sbjct: 1852 GDEI--SGNEVTIEPKWSVARHLPEYIQKDFIIIVATFIFGPWKFA--LEKKRGS----- 1902

Query: 1741 SCTPSITVAAAENFESHIVQYVKGEISSYFTGKLLSIVRDAIHHMKKMNNDQHNSPGVMQ 1800
                      AE+ E+ +V+Y+K +I + F   ++  + +   H+K +N    +      
Sbjct: 1903 ----------AESLEAEMVEYLKEQIGTRFISMIVEKIGNIRSHIKDINVSDAS-----W 1947

Query: 1801 TAANIHKVDAPLEFIKHVCAAFALDQNVQHDVLVMRKNLLKYVRVREFAPEAEFRDPCPS 1860
             +    K D   EFI+ + A  ALDQNVQ DVLVMRK LLKY++V+E A EAEF DP PS
Sbjct: 1948 ASGQAPKGDYTFEFIQIITAVLALDQNVQQDVLVMRKILLKYIKVKECAAEAEFIDPGPS 2007

Query: 1861 FILPNVICSYCNDCRDLDLCRDMALLAQ-DWHCAMPQCGQPYDREVMENALLQIVRQRER 1919
            FILPNV CS C   RDLD CRD ALL + +W CA PQC + YD+E +E++++Q+VRQRER
Sbjct: 2008 FILPNVACSNCGAYRDLDFCRDSALLTEKEWSCADPQCVKIYDKEQIESSIIQMVRQRER 2067

Query: 1920 LYHLQDLVCIRCNQVKAAHLAEQCACAGSFRCKEDASDFRSKMQIFLNIANRQGFQLLQE 1979
            +Y LQDLVC RCNQVKAAHL EQC C+GSFRCKE  SDF  +++IFL+IA RQ F+LL+E
Sbjct: 2068 MYQLQDLVCNRCNQVKAAHLTEQCECSGSFRCKESGSDFHKRIEIFLDIAKRQKFRLLEE 2127

Query: 1980 CTSWIL 1985
            C SWIL
Sbjct: 2128 CISWIL 2133


>gi|3885342|gb|AAC77870.1| putative DNA polymerase epsilon catalytic subunit [Arabidopsis
            thaliana]
          Length = 2154

 Score = 2209 bits (5725), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 1080/1426 (75%), Positives = 1207/1426 (84%), Gaps = 54/1426 (3%)

Query: 1    MDRRRWDRQDGRRTKKQKLIRSAEEELEAKLGYDLFSEGDKRLGWLLTFASSSLEDEDTR 60
            M  RR DR    R   QK+  SA +ELE KLG+ LFS+G+ RLGWLLTFASSS ED DT 
Sbjct: 1    MSGRRCDR----RLNVQKV--SAADELETKLGFGLFSQGETRLGWLLTFASSSWEDADTG 54

Query: 61   KVYSCIDLYFVSQDGSTFKSKYKFRPYFYAATKEKMEMDVEAYLRRRYESQIADIEILEK 120
            K +SC+DL+FV+QDGS+FK+KYKFRPY YAATK+ ME++VEAYLRRRYE Q+ADI+I+ K
Sbjct: 55   KTFSCVDLFFVTQDGSSFKTKYKFRPYLYAATKDNMELEVEAYLRRRYERQVADIQIVHK 114

Query: 121  EDLDLKNHLSGLHKSYLKISFDTVQQLMDVKKDLLHVVERNQAKFDAAEAYESILTGKRE 180
            EDL LKNHLSGL K YLK+SFDTVQQL++VK+DLLH+VERN AKF+A EAYESIL+GKRE
Sbjct: 115  EDLYLKNHLSGLQKKYLKVSFDTVQQLVEVKRDLLHIVERNLAKFNALEAYESILSGKRE 174

Query: 181  QRPQDFLDCIVDLREYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLLEKRVDLLQRAEVH 240
            QRPQD LD +VDLREYDVPYH+RFAIDNDVR GQWY+VSISST  +LEKR DLLQRAEV 
Sbjct: 175  QRPQDCLDSVVDLREYDVPYHVRFAIDNDVRSGQWYNVSISSTDVILEKRTDLLQRAEVR 234

Query: 241  VCAFDIETTKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEG 300
            VCAFDIET KLPLKFPDA+YD IMMISYM+DGQG+LI NRECVG+DIEDLEYTPKPEFEG
Sbjct: 235  VCAFDIETVKLPLKFPDAEYDQIMMISYMVDGQGFLITNRECVGKDIEDLEYTPKPEFEG 294

Query: 301  YFKVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQ 360
            YFKVTNV NE+ELLR WF+HMQE+KPGIYVTYNGD+FDWPF+E RA+HHG KM+EELGF+
Sbjct: 295  YFKVTNVTNEVELLRKWFSHMQELKPGIYVTYNGDFFDWPFIERRASHHGIKMNEELGFR 354

Query: 361  CDKNQGECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAK 420
            CD+NQGECRAKF CHLDCF+WVKRDSYLPQGSQGLKAVTK KLGYDPLEVNPEDMVRFA 
Sbjct: 355  CDQNQGECRAKFVCHLDCFSWVKRDSYLPQGSQGLKAVTKVKLGYDPLEVNPEDMVRFAM 414

Query: 421  EKPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQA 480
            EKPQ MASYSVSDAVATYYLYMTYVHPF+FSLATIIPM PDEVLRKGSGTLCEMLLMV+A
Sbjct: 415  EKPQTMASYSVSDAVATYYLYMTYVHPFVFSLATIIPMVPDEVLRKGSGTLCEMLLMVEA 474

Query: 481  YKANVICPNKHQSDPEKFYRNHLLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQL 540
            YKANV+CPNK+Q+DPEKFY+  LLESETYIGGHVECL+SGVFRSD+PTSFKLD SAY+QL
Sbjct: 475  YKANVVCPNKNQADPEKFYQGKLLESETYIGGHVECLQSGVFRSDIPTSFKLDASAYQQL 534

Query: 541  LNNLDRDLQYAIKVEGKMDLESVSNYDEVKNAIMEKLLRLQEEPIREECPLIYHLDVAAM 600
            ++NL RDL+YAI VEGKM ++SVSN+DEVK  I EKL +L+++PIREE PLIYHLDVAAM
Sbjct: 535  IDNLGRDLEYAITVEGKMRMDSVSNFDEVKEVIREKLEKLRDDPIREEGPLIYHLDVAAM 594

Query: 601  YPNIILTNRLQPPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYYHLKKQI 660
            YPNIILTNRLQPPSIVTDEVCTACDFN P KTCLRKLEWVWRG  F G +S+YYHLKKQI
Sbjct: 595  YPNIILTNRLQPPSIVTDEVCTACDFNGPEKTCLRKLEWVWRGVTFKGNKSEYYHLKKQI 654

Query: 661  ESEFVD-GTNGHLSKSFLDLPKMEQQSRLKDRLKKYCQKAYKRVLDKPVTELREAGICMR 719
            ESE VD G N   SK FLDLPK+EQQS+LK+RLKKYCQKAY RVLDKP+TE+REAGICMR
Sbjct: 655  ESESVDAGANMQSSKPFLDLPKVEQQSKLKERLKKYCQKAYSRVLDKPITEVREAGICMR 714

Query: 720  ENSFYVDTVRSFRDRRYEYKGLNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHK 779
            EN FYVDTVRSFRDRRYEYK LNKVWKGKLSEAKASGN IKIQEA DMVV+YDSLQLAHK
Sbjct: 715  ENPFYVDTVRSFRDRRYEYKTLNKVWKGKLSEAKASGNLIKIQEAHDMVVVYDSLQLAHK 774

Query: 780  CILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLP 839
            CILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIE+IGKPLELDTDGIWC LP
Sbjct: 775  CILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIERIGKPLELDTDGIWCALP 834

Query: 840  GSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIE 899
            GSFPENFTFKT D+ KK TISYPCV+LNVDVA+NN+NDQYQTLVDPV KTY + SECSIE
Sbjct: 835  GSFPENFTFKTIDM-KKFTISYPCVILNVDVAKNNSNDQYQTLVDPVRKTYNSRSECSIE 893

Query: 900  FEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELF 959
            FEVDGPYKAMI+PASKEEGILIKKRYAVFN DGT+AELKGFE+KRRGELKLIKVFQAELF
Sbjct: 894  FEVDGPYKAMIIPASKEEGILIKKRYAVFNHDGTIAELKGFEMKRRGELKLIKVFQAELF 953

Query: 960  DKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLADYGEQK 1019
            DKFLHGST+EECYSAVAAVANRWLDLL+ QGKDIADSEL+DYISESSTMSKSLADYG+QK
Sbjct: 954  DKFLHGSTLEECYSAVAAVANRWLDLLEGQGKDIADSELLDYISESSTMSKSLADYGQQK 1013

Query: 1020 SCAVTTARRLSDFLGDTMVKDKGLRCQYIVACEPQGTPVSERAVPVAIFETDAEIMKFYL 1079
            SCAVTTA+RL+DFLGDTMVKDKGLRCQYIVA EP+GTPVSERAVPVAIF+TD    KFYL
Sbjct: 1014 SCAVTTAKRLADFLGDTMVKDKGLRCQYIVAREPEGTPVSERAVPVAIFQTDDPEKKFYL 1073

Query: 1080 RKWCKTSSDVGIRSIVDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLYKKVR 1139
            +KWCK SS  GIRSI+DW YYKQRL SAIQK+ITIPAAMQKV+NPV RV HP WL KKV 
Sbjct: 1074 QKWCKISSYTGIRSIIDWMYYKQRLHSAIQKVITIPAAMQKVANPVLRVRHPYWLEKKVC 1133

Query: 1140 EKEDKFRQRKLVDIFSSLKKDDFLNKTCNAETNLMDENVEDLEDFPKKRRNSVNGPRPIV 1199
               DKFRQ K+VD+FSS  KD          +   D  V D+E+F K+ R SV GP+P+ 
Sbjct: 1134 ---DKFRQGKIVDMFSSANKD---------HSTTQDNVVADIEEFCKENRPSVKGPKPVA 1181

Query: 1200 RCFEVNNEQKTVKTTDQVDSLRQQLEPSEVSDQQPSSQNAIDTENIDRIVDYKGWLELKK 1259
            R FEV+      K  +  D         E  D        I  +N+D+ VDY+GWLEL+K
Sbjct: 1182 RSFEVDRNHSEGKQQESWD--------PEFHD--------ISLQNVDKNVDYQGWLELEK 1225

Query: 1260 RKWKDNLDRRKKQKLGSLRASHQANGVSESLGDMINHKEAQRRTGVGSYFRRQETAMTRC 1319
            RKWK  L  +KK++   L+  +Q +         IN K  + R GVGSYFRR E A+T  
Sbjct: 1226 RKWKMTLTNKKKRRFDDLKPCNQID------AHKINKKVCKGRVGVGSYFRRPEEALTSS 1279

Query: 1320 HWQIIQLVPSSQSGVFLAWVVVEGIMVRIPITVPRLFYLNSKDPIVEKFPGRRVNKTLPH 1379
            + QIIQLV S QSG F AWVVVEG+M++IP+T+PR+FY+NSK  I   F G+ +NK LPH
Sbjct: 1280 YLQIIQLVQSPQSGQFFAWVVVEGLMLKIPLTIPRVFYINSKASIAGNFTGKCINKILPH 1339

Query: 1380 GRRSFNLIE------------VMIDEDQFRKESKKLAALLADPEVE 1413
            G+  +NL+E            V I EDQF KESKKLAALLADPE+E
Sbjct: 1340 GKPCYNLMEARHLHNTHILLLVNIQEDQFIKESKKLAALLADPEIE 1385



 Score =  619 bits (1595), Expect = e-174,   Method: Compositional matrix adjust.
 Identities = 314/606 (51%), Positives = 407/606 (67%), Gaps = 56/606 (9%)

Query: 1409 DPEVEVLGWQQNAAKIGMQRCAASSQWFNERISLARYAHI-------------------- 1448
            D   + + WQ+ AAKI + RCA++ QW + RI+ +RYAH+                    
Sbjct: 1571 DNSYQPVSWQRPAAKIAVLRCASAIQWLDRRIAQSRYAHVPLGNFGRDWLTFTVDIFLSR 1630

Query: 1449 --------LWISDDGVPDLGGTSEEDECFADEVHQPVLTYPGAYRKVSVELKIHHLSVNA 1500
                    LW+SD+GVPDLG  + E+   ADE+ +  L +PGAYRKVSVELK+H L+VNA
Sbjct: 1631 ALRDQQQVLWVSDNGVPDLGDINNEETFLADELQETSLLFPGAYRKVSVELKVHRLAVNA 1690

Query: 1501 LLKSNQVNEMEGGGLFGFDQDMNSGPYNNELCGFDETTSSAPAFRVVKQLIQRCLTDAVT 1560
            LLKS+ V+EMEGGG  G +   + G   N+   FDE    A AFRV+KQLI+R L DA  
Sbjct: 1691 LLKSDLVSEMEGGGFLGVN---SRGSSLNDNGSFDENNGCAQAFRVLKQLIKRLLHDACN 1747

Query: 1561 SGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEFRKLGATIIFANF 1620
            SGN++AD+ILQHL  WL SP SKLHDP LH +LHKVMQKVFA+LL + R+LGA II+A+F
Sbjct: 1748 SGNIYADSILQHLSWWLRSPSSKLHDPALHLMLHKVMQKVFALLLTDLRRLGAIIIYADF 1807

Query: 1621 SKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLFMDQYNYGGIPAR 1680
            SKVIIDTGKFDLSAAK YC+SLL  + +R++F+ I LEPVH+WHSLLFMDQ+NY GI A 
Sbjct: 1808 SKVIIDTGKFDLSAAKTYCESLLTVMGSRDIFKLILLEPVHYWHSLLFMDQHNYAGIRAT 1867

Query: 1681 ADESLDDDSQVDIVSSWNIAEYLPKEIQDHFVLVVSEFMYIPWKHAQKLAASRASLQEGS 1740
             DE     ++V I   W++A +LP+ IQ  F+++V+ F++ PWK A  L   R S     
Sbjct: 1868 GDEI--SGNEVTIEPKWSVARHLPEYIQKDFIIIVATFIFGPWKFA--LEKKRGS----- 1918

Query: 1741 SCTPSITVAAAENFESHIVQYVKGEISSYFTGKLLSIVRDAIHHMKKMNNDQHNSPGVMQ 1800
                      AE+ E+ +V+Y+K +I + F   ++  + +   H+K +N    +      
Sbjct: 1919 ----------AESLEAEMVEYLKEQIGTRFISMIVEKIGNIRSHIKDINVSDAS-----W 1963

Query: 1801 TAANIHKVDAPLEFIKHVCAAFALDQNVQHDVLVMRKNLLKYVRVREFAPEAEFRDPCPS 1860
             +    K D   EFI+ + A  ALDQNVQ DVLVMRK LLKY++V+E A EAEF DP PS
Sbjct: 1964 ASGQAPKGDYTFEFIQIITAVLALDQNVQQDVLVMRKILLKYIKVKECAAEAEFIDPGPS 2023

Query: 1861 FILPNVICSYCNDCRDLDLCRDMALLAQ-DWHCAMPQCGQPYDREVMENALLQIVRQRER 1919
            FILPNV CS C   RDLD CRD ALL + +W CA PQC + YD+E +E++++Q+VRQRER
Sbjct: 2024 FILPNVACSNCGAYRDLDFCRDSALLTEKEWSCADPQCVKIYDKEQIESSIIQMVRQRER 2083

Query: 1920 LYHLQDLVCIRCNQVKAAHLAEQCACAGSFRCKEDASDFRSKMQIFLNIANRQGFQLLQE 1979
            +Y LQDLVC RCNQVKAAHL EQC C+GSFRCKE  SDF  +++IFL+IA RQ F+LL+E
Sbjct: 2084 MYQLQDLVCNRCNQVKAAHLTEQCECSGSFRCKESGSDFHKRIEIFLDIAKRQKFRLLEE 2143

Query: 1980 CTSWIL 1985
            C SWIL
Sbjct: 2144 CISWIL 2149


>gi|48716486|dbj|BAD23092.1| putative DNA polymerase epsilon catalytic subunit protein isoform b
            [Oryza sativa Japonica Group]
          Length = 2257

 Score = 2134 bits (5530), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 1057/1472 (71%), Positives = 1194/1472 (81%), Gaps = 100/1472 (6%)

Query: 14   TKKQKLIRSAEEELEAKLGYDLFSEGDKRLGWLLTFASSSLEDEDTRKVYSCIDLYFVSQ 73
             K Q+L   AEE LE++LG+  +++ ++RLGWLLTF+ SS EDEDT K+YSC+DLYFVSQ
Sbjct: 36   AKDQRLRLGAEELLESRLGFAPYTDSERRLGWLLTFSPSSWEDEDTGKIYSCVDLYFVSQ 95

Query: 74   DGSTFKSKYKFRPYFYAATKEKMEMDVEAYLRRRYESQIADIEILEKEDLDLKNHLSGLH 133
            DGSTFK KYKF PYFYAATK+KME++VEAYLRRRYE  IADIEI+EKEDLDLKNHLSGL 
Sbjct: 96   DGSTFKVKYKFPPYFYAATKDKMELEVEAYLRRRYEGDIADIEIIEKEDLDLKNHLSGLK 155

Query: 134  KSYLKISFDTVQQLMDVKKDLLHVVERNQAKFDAAEAYESILTGK-----------REQR 182
            + YLKI FDTVQQLM V+ DLLHVVE+N+ + +AAEA+ESI   K           R +R
Sbjct: 156  RKYLKIQFDTVQQLMRVRSDLLHVVEKNEEELNAAEAFESIYGVKSLCSDDLVHYDRVER 215

Query: 183  PQDFLDCIVDLREYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLLEKRVDLLQRAEVHVC 242
            PQD+++CI+DLREYDVPYH+RFAIDNDVRCGQWYDVS+SS+  LL +R DLLQRAEVHVC
Sbjct: 216  PQDYINCIIDLREYDVPYHVRFAIDNDVRCGQWYDVSVSSSDVLLHRREDLLQRAEVHVC 275

Query: 243  AFDIETTKLPLKFPDADYDIIMMISYMLDGQGYLIINRE--------------------- 281
            AFDIETTKLPLKFPDA+YD +MMISYM+DGQGYLIINRE                     
Sbjct: 276  AFDIETTKLPLKFPDAEYDTVMMISYMIDGQGYLIINREVPDVLFSIIIYQISAYYVQIM 335

Query: 282  CVGEDIEDLEYTPKPEFEGYFKVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPF 341
            CVGEDIEDLEYTPKPEFEG+FKV NV NE++LL+ WF+HMQEVKPGIYVTYNGD+FDWPF
Sbjct: 336  CVGEDIEDLEYTPKPEFEGHFKVKNVANELDLLKAWFSHMQEVKPGIYVTYNGDFFDWPF 395

Query: 342  LETRAAHHGFKMSEELGFQCDKNQGECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKA 401
            LE RAAHHG KM+EE+GFQCD NQGECRAKF+CHLDCFAWVKRDSYLPQGS GLKAVTKA
Sbjct: 396  LEKRAAHHGIKMNEEIGFQCDNNQGECRAKFSCHLDCFAWVKRDSYLPQGSHGLKAVTKA 455

Query: 402  KLGYDPLEVNPEDMVRFAKEKPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPD 461
            KLGYDPLEVNPEDMVRFA E+PQ MASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPD
Sbjct: 456  KLGYDPLEVNPEDMVRFAMEQPQTMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPD 515

Query: 462  EVLRKGSGTLCEMLLMVQAYKANVICPNKHQSDPEKFYRNHLLESETYIGGHVECLESGV 521
            EVLRKGSGTLCEMLLMVQA+KAN+ICPNKHQ+D EKFY N LLESETYIGGHVECLE+GV
Sbjct: 516  EVLRKGSGTLCEMLLMVQAFKANIICPNKHQADLEKFYNNRLLESETYIGGHVECLETGV 575

Query: 522  FRSDLPTSFKLDPSAYEQLLNNLDRDLQYAIKVEGKMDLESVSNYDEVKNAIMEKLLRLQ 581
            FRSDLPT F+L+PSA EQL+ NLDRDLQYAI VEGK+D++SV+NYDEVK+AI +KL+ L+
Sbjct: 576  FRSDLPTKFQLEPSACEQLIANLDRDLQYAISVEGKLDIDSVTNYDEVKDAIKQKLVSLR 635

Query: 582  EEPIREECPLIYHLDVAAMYPNIILTNRLQPPSIVTDEVCTACDFNRPGKTCLRKLEWVW 641
            + PIREECPLIYHLDVAAMYPNIILTNRLQPPSIVTD  CTACDFNRPGK CLR LEWVW
Sbjct: 636  DHPIREECPLIYHLDVAAMYPNIILTNRLQPPSIVTDVDCTACDFNRPGKNCLRTLEWVW 695

Query: 642  RGEIFMGKRSDYYHLKKQIESEFVDGTNGHLSKSFLDLPKMEQQSRLKDRLKKYCQKAYK 701
            RGE +M K+SDY+H+K+QIESE +       SK FLDL K E   +LKDRLKKYCQKAYK
Sbjct: 696  RGETYMAKKSDYHHIKRQIESEMIQAGGVTPSKPFLDLSKPEHLLKLKDRLKKYCQKAYK 755

Query: 702  RVLDKPVTELREAGICMRENSFYVDTVRSFRDRRYEYKGLNKVWKGKLSEAKASGNSIKI 761
            RV+DKP+TE+R AGICMRENSFYVDTVRSFRDRRYEYKGLNK WKGKL+EAKA+GNSIKI
Sbjct: 756  RVVDKPITEVRNAGICMRENSFYVDTVRSFRDRRYEYKGLNKSWKGKLAEAKANGNSIKI 815

Query: 762  QEAQDMVVLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIE 821
            QEAQDMVVLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLL++
Sbjct: 816  QEAQDMVVLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLVD 875

Query: 822  KIGKPLELDTDGIWCVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQT 881
            KIGKPLELDTDGIWCVLPGSFPENFTFKT +  KKLTISYPCVMLNVDVARNNTNDQYQT
Sbjct: 876  KIGKPLELDTDGIWCVLPGSFPENFTFKT-NAGKKLTISYPCVMLNVDVARNNTNDQYQT 934

Query: 882  LVDPVSKTYETHSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFE 941
            L DPV+K Y THSECSIEFEVDGPYKAMILPASKEEG+L+KKRYAVFN+DGTLAELKGFE
Sbjct: 935  LNDPVNKLYTTHSECSIEFEVDGPYKAMILPASKEEGVLLKKRYAVFNEDGTLAELKGFE 994

Query: 942  IKRRGELKLIKVFQAELFDKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDY 1001
            IKRRGELKLIKVFQAE+FD+FLHGST+EECY+AVA+VANRWLDLLDNQG DI+D+EL+D+
Sbjct: 995  IKRRGELKLIKVFQAEVFDRFLHGSTLEECYTAVASVANRWLDLLDNQGIDISDNELLDF 1054

Query: 1002 ISESSTMSKSLADYGEQKSCAVTTARRLSDFLGDTMVKDKGLRCQYIVACEPQGTPVSER 1061
            ISESSTMSKSL DYGEQKSCAVTTA+RL++FLGD+MVKDKGL CQYIVA EPQGTPVSER
Sbjct: 1055 ISESSTMSKSLVDYGEQKSCAVTTAKRLAEFLGDSMVKDKGLHCQYIVAREPQGTPVSER 1114

Query: 1062 AVPVAIFETDAEIMKFYLRKWCKTSSDVGIRSIVDWSYYKQRLSSAIQKIITIPAAMQK- 1120
            A+PVAIFETDAEI KFYLRKWCK SS+  IRSIVDWSYYKQRLSSAIQKIITIPAAMQK 
Sbjct: 1115 AIPVAIFETDAEIAKFYLRKWCKISSEASIRSIVDWSYYKQRLSSAIQKIITIPAAMQKA 1174

Query: 1121 -------------------------------VSNPVPRVVHPDWLYKKVREKEDKFRQRK 1149
                                           +SNPVPRV+HPDWL+KKVREK+D+FRQRK
Sbjct: 1175 IYFLLVTLIILYTFYLSPLIFHDICEIMLLQISNPVPRVLHPDWLHKKVREKDDRFRQRK 1234

Query: 1150 LVDIFSSLKKDDFLNKTCNAETNLMDENVEDLEDF-----PKKRRNSVNGPRPIVRCFEV 1204
            L D+F+ L+KD           NL  +   D+ED        ++ +  NG       F  
Sbjct: 1235 LRDMFNPLEKD-------RGVQNL--DGTGDMEDLLTLDGGMRKSHVPNG-------FGK 1278

Query: 1205 NNEQKTVKTTDQVDSLRQQLEPSEVSDQQPSS---QNAIDTENIDRIVDYKGWLELKKRK 1261
             N+     +T+      +  + S     +P +   QN    E +DR  DY+GWL+ KKRK
Sbjct: 1279 ENKPNDAPSTEAGSKHSKNKQKSITRSNEPLAVHIQNDAADEQVDRSTDYQGWLDAKKRK 1338

Query: 1262 WKDNLDRRKKQKLGSLRASHQANGVSESLGDMINHKEAQRRTGVGSYFRRQETAMTRCHW 1321
            WK   +++K+Q+LG   A+  ++G +  L           R  V   F      +  C  
Sbjct: 1339 WKYVREQKKRQRLG---AAVTSDGPTNDL--------FSARNVVIYSFTLMPDKLIYCPH 1387

Query: 1322 QIIQLVPSSQSGVFLAWVVVEGIMVRIPITVPRLFYLNSKDPIVEKFPGRRVNKTLPHGR 1381
            QIIQL  S+  G F AWVV EGIM +IPI VPR+FYLNSK P+ E+FPGRRV K LPHGR
Sbjct: 1388 QIIQLASSTLPGHFFAWVVAEGIMFKIPINVPRVFYLNSKAPVTEEFPGRRVKKILPHGR 1447

Query: 1382 RSFNLIEVMIDEDQFRKESKKLAALLADPEVE 1413
              FNLIEV+  E+QFR E KKLAA LA+P+VE
Sbjct: 1448 PCFNLIEVVTSEEQFRVEGKKLAAHLAEPDVE 1479



 Score =  852 bits (2201), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 397/613 (64%), Positives = 476/613 (77%), Gaps = 34/613 (5%)

Query: 1409 DPEVEVLGWQQNAAKIGMQRCAASSQWFNERISLARYAHI-------------------- 1448
            D   + LGWQ  A +  MQRCAAS+QWFNERISLARYAH+                    
Sbjct: 1646 DNNYQALGWQATAGRTSMQRCAASTQWFNERISLARYAHVPLGNFELDWLLFTADVFFSR 1705

Query: 1449 --------LWISDDGVPDLGGTSEEDECFADEVHQPVLTYPGAYRKVSVELKIHHLSVNA 1500
                    LWISDDG+PDLGGT E D CFADEV QP LTYPGAYR+V+VELKIHHL+VN+
Sbjct: 1706 ALRDQQQVLWISDDGIPDLGGTYEGDTCFADEVIQPALTYPGAYRRVAVELKIHHLAVNS 1765

Query: 1501 LLKSNQVNEMEGGGLFGFDQDMNSGPYNNELCGFDETTSSAPAFRVVKQLIQRCLTDAVT 1560
            LLKS+QV+EMEGG +  F  DM +GP   E   FD+ T   PAF+V+KQLIQRC++DAV+
Sbjct: 1766 LLKSSQVDEMEGGPIGSFANDMPAGPNGTE-TEFDDATLCLPAFQVLKQLIQRCISDAVS 1824

Query: 1561 SGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEFRKLGATIIFANF 1620
            SGNVFADAILQHLYRWLCSP SKLHDP LH +LH VM+KVFA++LAEFRKLGA +IFANF
Sbjct: 1825 SGNVFADAILQHLYRWLCSPRSKLHDPALHHLLHNVMKKVFALMLAEFRKLGANVIFANF 1884

Query: 1621 SKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLFMDQYNYGGIPAR 1680
            SK+IIDTGK DL +A+AYCDSLLK LQTR++FEW+ELEP+H+WHSLLFMDQYNYGGI A+
Sbjct: 1885 SKIIIDTGKVDLLSARAYCDSLLKTLQTRDIFEWVELEPLHYWHSLLFMDQYNYGGIQAK 1944

Query: 1681 -----ADESLDDDSQVDIVSSWNIAEYLPKEIQDHFVLVVSEFMYIPWKHAQKLAASRAS 1735
                 ++ S D D+ +DIVSSWNIAEYLPK  QDHFVL+VSEF+Y+PWK+ ++  A R++
Sbjct: 1945 MQNATSEGSSDGDNDIDIVSSWNIAEYLPKATQDHFVLIVSEFLYVPWKYMKEQVALRST 2004

Query: 1736 LQEGSSCTPSITVAAAENFESHIVQYVKGEISSYFTGKLLSIVRDAIHHMKKMNNDQHNS 1795
             ++ +SCTPSIT+ AAEN E  ++ Y++ +IS+YF  KLL IV D +HH K     +   
Sbjct: 2005 TRDETSCTPSITIMAAENLEVQVIGYLRDQISNYFADKLLRIVSDILHHFKGKGKSESVE 2064

Query: 1796 PGVMQTAANIHKVDAPLEFIKHVCAAFALDQNVQHDVLVMRKNLLKYVRVREFAPEAEFR 1855
                +   + HK DA LEFIKH+CA  ALDQNVQHD+L MRKNLLK VRV+EFAPEA+F+
Sbjct: 2065 LTNREPDPHTHKGDAALEFIKHICAVLALDQNVQHDILRMRKNLLKLVRVKEFAPEAQFQ 2124

Query: 1856 DPCPSFILPNVICSYCNDCRDLDLCRDMALLAQDWHCAMPQCGQPYDREVMENALLQIVR 1915
            DPC SF LPNVICSYCNDCRDLDLCRD  L  Q+W CA+PQCGQPY RE MENALLQ+VR
Sbjct: 2125 DPCASFTLPNVICSYCNDCRDLDLCRDSTLQGQEWRCAVPQCGQPYHREQMENALLQVVR 2184

Query: 1916 QRERLYHLQDLVCIRCNQVKAAHLAEQCACAGSFRCKEDASDFRSKMQIFLNIANRQGFQ 1975
            QRERLYHLQDLVC+RC QVKAAHL+EQC+C G+FRCKE++S F SKM++FLN+A  Q F+
Sbjct: 2185 QRERLYHLQDLVCLRCRQVKAAHLSEQCSCGGAFRCKEESSQFLSKMRVFLNVAVSQKFE 2244

Query: 1976 LLQECTSWILEVQ 1988
            LLQ+   WILEV+
Sbjct: 2245 LLQDVVQWILEVR 2257


>gi|297825993|ref|XP_002880879.1| hypothetical protein ARALYDRAFT_901578 [Arabidopsis lyrata subsp.
            lyrata]
 gi|297326718|gb|EFH57138.1| hypothetical protein ARALYDRAFT_901578 [Arabidopsis lyrata subsp.
            lyrata]
          Length = 2133

 Score = 2073 bits (5371), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 1035/1413 (73%), Positives = 1170/1413 (82%), Gaps = 75/1413 (5%)

Query: 22   SAEEELEAKLGYDLFSEGDKRLGWLLTFASSSLEDEDTRKVYSCIDLYFVSQDGSTFKSK 81
            SA +ELE KLG+ LFS+G+ RLGWLLTFASSS ED DT K +SC+DL+FV+QDGS+FK+K
Sbjct: 5    SAADELETKLGFGLFSQGETRLGWLLTFASSSWEDADTGKTFSCVDLFFVTQDGSSFKTK 64

Query: 82   YKFRPYFYAATKEKMEMDVEAYLRRRYESQIADIEILEKEDLDLKNHLSGLHKSYLKISF 141
            YKFRPY YAATK+ ME++VEAYLRRRY++Q+ADI+I+ KEDLDLKNHLSGL K YLK+SF
Sbjct: 65   YKFRPYLYAATKDNMELEVEAYLRRRYQTQVADIQIVHKEDLDLKNHLSGLQKKYLKVSF 124

Query: 142  DTVQQLMDVKKDLLHVVERNQAKFDAAEAYESILTGKREQRPQDFLDCIVDLREYDVPYH 201
            DTVQQL++VK+DLLH+VERN AKFDA EAYESIL GKREQRPQD LD +VDLREYDVPYH
Sbjct: 125  DTVQQLVEVKRDLLHIVERNLAKFDAFEAYESILAGKREQRPQDCLDSVVDLREYDVPYH 184

Query: 202  IRFAIDNDVRCGQWYDVSISSTGPLLEKRVDLLQRAEVHVCAFDIETTKLPLKFPDADYD 261
            +RFAIDNDVR GQWY+VSISST  +LEKR DLLQRAEV VCAFDIET KLPLKFPDA+ D
Sbjct: 185  VRFAIDNDVRSGQWYNVSISSTDVILEKRTDLLQRAEVRVCAFDIETVKLPLKFPDAESD 244

Query: 262  IIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNVNNEIELLRLWFAHM 321
             IMMISYM+DGQG+LI NRECVG+DIEDLEYTPKPEFEGYFKVTNVNNE+ELLR WF+HM
Sbjct: 245  QIMMISYMVDGQGFLITNRECVGKDIEDLEYTPKPEFEGYFKVTNVNNEVELLRKWFSHM 304

Query: 322  QEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDKNQGECRAKFACHLDCFAW 381
            QE+KPGIYVTYNGD+FDWPF+E RA+HHG KM+EELGF+CD NQGECRAKF CHLDCF+W
Sbjct: 305  QELKPGIYVTYNGDFFDWPFIERRASHHGIKMNEELGFRCDHNQGECRAKFVCHLDCFSW 364

Query: 382  VKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQMMASYSVSDAVATYYLY 441
            VKRDSYLPQGS GLKAVTKAKLGYDPLEVNPEDMVRFA EKPQ MASYSVSDAVATYYLY
Sbjct: 365  VKRDSYLPQGSHGLKAVTKAKLGYDPLEVNPEDMVRFAMEKPQTMASYSVSDAVATYYLY 424

Query: 442  MTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVICPNKHQSDPEKFYRN 501
            MTYVHPF+FSLATIIPM PDEVLRKGSGTLCEMLLMV+AYKANV+CPNK+Q+DPEKFY+ 
Sbjct: 425  MTYVHPFVFSLATIIPMVPDEVLRKGSGTLCEMLLMVEAYKANVVCPNKNQADPEKFYQG 484

Query: 502  HLLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQLLNNLDRDLQYAIKVEGKMDLE 561
             LLESETYIGGHVECL+SGVFRSD+PTSFKL+ SAY+QL++NL RDL+YAI VEGKM ++
Sbjct: 485  KLLESETYIGGHVECLQSGVFRSDIPTSFKLEASAYQQLIDNLGRDLEYAITVEGKMRMD 544

Query: 562  SVSNYDEVKNAIMEKLL---RLQEEPIREECPLIYHLDVAAMYPNIILTNRLQPPSIVTD 618
            S+SNYDEVK+ I  K     +L+++PIREE PLIYHLDVAAMYPNIILTNRLQPPSIVTD
Sbjct: 545  SISNYDEVKDVIRGKSFYGEKLRDDPIREEGPLIYHLDVAAMYPNIILTNRLQPPSIVTD 604

Query: 619  EVCTACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYYHLKKQIESEFVD-GTNGHLSKSFL 677
            EVCTACDFN   KTCLRKLEWVWRG  F G +S+YYHLKKQIESE VD G N   SK FL
Sbjct: 605  EVCTACDFNGLEKTCLRKLEWVWRGVTFKGNKSEYYHLKKQIESESVDAGANMQSSKPFL 664

Query: 678  DLPKMEQQSRLKDRLKKYCQKAYKRVLDKPVTELREAGICMRENSFYVDTVRSFRDRRYE 737
            DLPK+EQQS+LK+RLKKYCQKAY RVLDKP+TE+REAGICMREN FYVDTVRSFRDRRYE
Sbjct: 665  DLPKVEQQSKLKERLKKYCQKAYSRVLDKPITEVREAGICMRENPFYVDTVRSFRDRRYE 724

Query: 738  YKGLNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHKCILNSFYGYVMRKGARWY 797
            YK LNKVWKGKLSEAKASGNSIKIQEA DMVV+YDSLQLAHKCILNSFYGYVMRKGARWY
Sbjct: 725  YKTLNKVWKGKLSEAKASGNSIKIQEAHDMVVVYDSLQLAHKCILNSFYGYVMRKGARWY 784

Query: 798  SMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLPGSFPENFTFKTKDLKKKL 857
            SMEMAGVVTYTGAKIIQNARLLIE+IGKPLELDTDGIWC LPGSFPENFTFKT D+ KK 
Sbjct: 785  SMEMAGVVTYTGAKIIQNARLLIERIGKPLELDTDGIWCALPGSFPENFTFKTIDM-KKF 843

Query: 858  TISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEFEVDGPYKAMILPASKEE 917
            TISYPCV+LNVDVA+NN+NDQYQTLVDPV KTY + SECSIEFEVDGPYKAMI+PASKEE
Sbjct: 844  TISYPCVILNVDVAKNNSNDQYQTLVDPVRKTYNSRSECSIEFEVDGPYKAMIIPASKEE 903

Query: 918  GILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFLHGSTIEECYSAVAA 977
            GILIKKRY VFN DGT+AELKGFE+KRRGELKLIKVFQAELFDKFLHGST+EECYSAVAA
Sbjct: 904  GILIKKRYVVFNHDGTIAELKGFEMKRRGELKLIKVFQAELFDKFLHGSTLEECYSAVAA 963

Query: 978  VANRWLDLLDNQGKDIADSELIDYISESSTMSKSLADYGEQKSCAVTTARRLSDFLGDTM 1037
            VANRWLDLL++QGKDIADSEL+DYISESSTMSKSLADYG+QKSCAVTTA+RL+DFLGDTM
Sbjct: 964  VANRWLDLLEDQGKDIADSELLDYISESSTMSKSLADYGQQKSCAVTTAKRLADFLGDTM 1023

Query: 1038 VKDKGLRCQYIVACEPQGTPVSERAVPVAIFETDAEIMKFYLRKWCKTSSDVGIRSIVDW 1097
            VKDKGLRCQYIVACEP+GTPVSERAVPVAIF+TD           CK     G R     
Sbjct: 1024 VKDKGLRCQYIVACEPEGTPVSERAVPVAIFQTDDPGKHSRKSFICKN----GAR----- 1074

Query: 1098 SYYKQRLSSA--IQKIITIPAAMQK---------------VSNPVPRVVHPDWLYKKVRE 1140
              Y   + S   +   IT  A +Q                V+NPVPRV HP WL KKV  
Sbjct: 1075 --YHHMMESVQLLTGCITSSAFIQLFKKLLPFLLQCRRFIVANPVPRVRHPHWLEKKVC- 1131

Query: 1141 KEDKFRQRKLVDIFSSLKKDDFLNKTCNAETNLMDENVEDLEDFPKKRRNSVNGPRPIVR 1200
              DKFRQ K+VD+FSS  KD  L+K     ++L  ++            N++   +  VR
Sbjct: 1132 --DKFRQGKIVDMFSSANKDGVLDK-----SHLTTQD------------NALGQSQLRVR 1172

Query: 1201 CFEVNNEQKTVKTTDQVDSLRQQLEPSEVSDQQPSSQNAIDTENIDRIVDYKGWLELKKR 1260
                    K+++ T +        +P E  D        I  +N D+ VDY+GWLEL+KR
Sbjct: 1173 -------MKSIEITLEGKQQESCWDP-EFHD--------ISFQNADKNVDYQGWLELEKR 1216

Query: 1261 KWKDNLDRRKKQKLGSLRASHQANGVSESLGDMINHKEAQRRTGVGSYFRRQETAMTRCH 1320
            KWK +L ++KK++   L+  +Q +         IN K  +   GVGSYFRR E A+T  +
Sbjct: 1217 KWKMSLKKKKKRRFDDLKPCNQID------AHKINKKVCKGTAGVGSYFRRPEEALTSSY 1270

Query: 1321 WQIIQLVPSSQSGVFLAWVVVEGIMVRIPITVPRLFYLNSKDPIVEKFPGRRVNKTLPHG 1380
             QIIQLV S QSG F AWVVVEG+M++IP+T+PR+FY+NSK  I E F G+ +NK LPHG
Sbjct: 1271 LQIIQLVQSPQSGQFFAWVVVEGLMLKIPLTIPRVFYINSKASIAENFTGKCINKILPHG 1330

Query: 1381 RRSFNLIEVMIDEDQFRKESKKLAALLADPEVE 1413
            +  +NL+EV I EDQF+KESKKLAALLADPE+E
Sbjct: 1331 KPCYNLMEVNIQEDQFKKESKKLAALLADPEIE 1363



 Score =  634 bits (1635), Expect = e-178,   Method: Compositional matrix adjust.
 Identities = 322/607 (53%), Positives = 414/607 (68%), Gaps = 57/607 (9%)

Query: 1409 DPEVEVLGWQQNAAKIGMQRCAASSQWFNERISLARYAHI-------------------- 1448
            D   + + WQ+ AAKI + RCA++ QW + RI+ +RYAH+                    
Sbjct: 1549 DNSYQPVSWQRPAAKIAVFRCASAFQWLDRRIAQSRYAHVPLGNFGRDWLTFTLDIFLSR 1608

Query: 1449 --------LWISDDGVPDLGGTSEEDECFADEVHQPVLTYPGAYRKVSVELKIHHLSVNA 1500
                    LW+SD+GVPDLG  + E+   ADE     L +PGAYRKVSVELK+H L+VNA
Sbjct: 1609 ALRDQQQVLWVSDNGVPDLGDINNEETFLADETS---LVFPGAYRKVSVELKVHRLAVNA 1665

Query: 1501 LLKSNQVNEMEGGGLFGFDQDMNS-GPYNNELCGFDETTSSAPAFRVVKQLIQRCLTDAV 1559
            LLKS+ V+EMEGGG  GF+Q +NS G   N+   FDE    A AFRV+KQLI+RCL DA 
Sbjct: 1666 LLKSDLVSEMEGGGFLGFEQGVNSRGSSLNDNGSFDENNGCAQAFRVLKQLIKRCLHDAR 1725

Query: 1560 TSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEFRKLGATIIFAN 1619
             SGN++AD+ILQHL  WLCSP SKLHDP LH +LHKVMQKVFA+LL + R+LGA II+A+
Sbjct: 1726 NSGNIYADSILQHLSWWLCSPSSKLHDPALHLMLHKVMQKVFALLLTDLRRLGAIIIYAD 1785

Query: 1620 FSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLFMDQYNYGGIPA 1679
            FSK++IDTGK DLSAAKAYC+SLL  + +R++FE I LEPVH+WHSLLFMDQ+NY GI A
Sbjct: 1786 FSKIVIDTGKSDLSAAKAYCESLLTVMGSRDIFELILLEPVHYWHSLLFMDQHNYAGIRA 1845

Query: 1680 RADESLDDDSQVDIVSSWNIAEYLPKEIQDHFVLVVSEFMYIPWKHAQKLAASRASLQEG 1739
              DE   D  +V I   W++A +LP+ IQ  F+++V+ F++ PWK          SL++ 
Sbjct: 1846 TGDEISGD--EVTIEPKWSVARHLPEYIQKDFIIIVATFIFGPWKF---------SLEKK 1894

Query: 1740 SSCTPSITVAAAENFESHIVQYVKGEISSYFTGKLLSIVRDAIHHMKKMNNDQHNSPGVM 1799
            S         +AE+ E+ +V+Y+K +I + F   ++  + +   HMK++N    +     
Sbjct: 1895 S--------GSAESLEAEMVEYLKEQIGTRFITMIVEKIGNIRSHMKEINVSDAS----- 1941

Query: 1800 QTAANIHKVDAPLEFIKHVCAAFALDQNVQHDVLVMRKNLLKYVRVREFAPEAEFRDPCP 1859
              +    K D   EFI+ + A   LDQNVQ DVLVMRK+LLKY++V+E A EA F DP P
Sbjct: 1942 WVSGQAPKGDNTFEFIQIITAVLVLDQNVQQDVLVMRKSLLKYIKVKECAAEAGFIDPGP 2001

Query: 1860 SFILPNVICSYCNDCRDLDLCRDMALLAQ-DWHCAMPQCGQPYDREVMENALLQIVRQRE 1918
            SFILPNV CS C   RDLDLCRD ALL + +W CA PQCG+ YD+E +EN+L+Q+VRQRE
Sbjct: 2002 SFILPNVACSNCGAYRDLDLCRDPALLTEKEWSCADPQCGKIYDKEQIENSLVQMVRQRE 2061

Query: 1919 RLYHLQDLVCIRCNQVKAAHLAEQCACAGSFRCKEDASDFRSKMQIFLNIANRQGFQLLQ 1978
            R+Y LQDLVC RCNQVKAAHL EQC C+GSFRCKE  SDF  +M+IFL+IA R  F+LL+
Sbjct: 2062 RMYQLQDLVCDRCNQVKAAHLTEQCECSGSFRCKESGSDFHKRMEIFLDIAKRLKFRLLE 2121

Query: 1979 ECTSWIL 1985
            EC SWIL
Sbjct: 2122 ECISWIL 2128


>gi|168037145|ref|XP_001771065.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162677598|gb|EDQ64066.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 2233

 Score = 2036 bits (5275), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 972/1411 (68%), Positives = 1159/1411 (82%), Gaps = 36/1411 (2%)

Query: 12   RRTKKQKLIRSAEEELEAKLGYDLFSEGDKRLGWLLTFASSSLEDEDTRKV-YSCIDLYF 70
            RR  + K+ R++E+ LEA  GY +F+EG+ RLGWLL   SS+++D +   + YSC++LYF
Sbjct: 49   RRVGRSKVWRTSEDALEASFGYQIFTEGEPRLGWLLNMVSSAMDDPNNDNITYSCVNLYF 108

Query: 71   VSQDGSTFKSKYKFRPYFYAATKEKMEMDVEAYLRRRYESQIADIEILEKEDLDLKNHLS 130
            + QDGSTFK+++KF PYFY  TKE  E++V+AYLRRRYE QIA+IEI+ KEDLDLKNHLS
Sbjct: 109  MCQDGSTFKAQFKFAPYFYLGTKENTELEVDAYLRRRYEGQIANIEIVNKEDLDLKNHLS 168

Query: 131  GLHKSYLKISFDTVQQLMDVKKDLLHVVERNQAKFDAAEAYESILTGKREQRP---QDFL 187
            GL   YLK+SF+TVQ+LM+VK +LL +V+RNQAK DAA+AYES+      + P   QD++
Sbjct: 169  GLQSKYLKLSFNTVQELMNVKSELLPLVQRNQAKLDAAQAYESLFNNSASKAPGKMQDYI 228

Query: 188  DCIVDLREYDVPYHIRFAIDN-DVRCGQWYDVSISSTGPLLEKRVDLLQRAEVHVCAFDI 246
            + +VD+REYDVPYH+RFAIDN D+RCG WY VS+ S+   LE+R DLLQRAEV VCAFDI
Sbjct: 229  EYMVDMREYDVPYHVRFAIDNADIRCGLWYMVSVESSQTKLERRTDLLQRAEVRVCAFDI 288

Query: 247  ETTKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTN 306
            ETTKLPLKFPDA YD +MMISYM+DGQGYLI+NRECVG +IEDLEYTPKPEFEG+FKVTN
Sbjct: 289  ETTKLPLKFPDASYDSVMMISYMIDGQGYLIVNRECVGAEIEDLEYTPKPEFEGHFKVTN 348

Query: 307  VNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDKNQG 366
               E ELL  WF+HM+EVKP IYVTYNGD+FDWPF++ RA HHG +M +E+GFQ ++  G
Sbjct: 349  TRTEKELLVSWFSHMREVKPSIYVTYNGDFFDWPFIQARALHHGMRMHDEIGFQHNETLG 408

Query: 367  ECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQMM 426
            EC +KFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLG+DPLEVNPEDMVRFA E+PQ M
Sbjct: 409  ECLSKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGFDPLEVNPEDMVRFAIEQPQTM 468

Query: 427  ASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVI 486
            ASYSVSDAV+TYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQA+K N+I
Sbjct: 469  ASYSVSDAVSTYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAFKGNII 528

Query: 487  CPNKHQSDPEKFYRNHLLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQLLNNLDR 546
            CPNKH+S+ EK Y   +LESETYIGGHVECLESGVFRSD+PT F L P AY+ L+NNLDR
Sbjct: 529  CPNKHKSEQEKVYNGKMLESETYIGGHVECLESGVFRSDIPTRFHLTPEAYQGLINNLDR 588

Query: 547  DLQYAIKVEGKMDLESVSNYDEVKNAIMEKLLRLQEEPIREECPLIYHLDVAAMYPNIIL 606
            DL+YAI+ EGK++LESV+NYDEVK  I  KL+ L++ PIR+E PLIYHLDVAAMYPNIIL
Sbjct: 589  DLKYAIEEEGKLELESVTNYDEVKEDIKLKLVNLRDTPIRDERPLIYHLDVAAMYPNIIL 648

Query: 607  TNRLQPPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYYHLKKQIESE-FV 665
            TNRLQPPSIVTDE+C ACDFNRPGKTC+R+LEWVWRGE +  KRS++ HLK QIESE F 
Sbjct: 649  TNRLQPPSIVTDEICAACDFNRPGKTCMRELEWVWRGETYAAKRSEFMHLKNQIESEQFP 708

Query: 666  DGTNGHLSKSFLDLPKMEQQSRLKDRLKKYCQKAYKRVLDKPVTELREAGICMRENSFYV 725
               +G   + F DLPK EQQS+LKDRLKKYCQK YKRVL+KP+T++R A +CMREN FYV
Sbjct: 709  SIADGGPLRYFRDLPKDEQQSKLKDRLKKYCQKVYKRVLEKPITDVRSASVCMRENPFYV 768

Query: 726  DTVRSFRDRRYEYKGLNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHKCILNSF 785
            DTV+SFRDRRYEYKGLNKVWKGKL +AKASGN IKIQEA D+V+LYDSLQLAHKCILNSF
Sbjct: 769  DTVKSFRDRRYEYKGLNKVWKGKLGDAKASGNPIKIQEASDLVILYDSLQLAHKCILNSF 828

Query: 786  YGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLPGSFPEN 845
            YGYVMRKGARWYSMEMAGVVTYTGAKIIQNAR+L+E+IGKPLELDTDGIWC LPGSFPEN
Sbjct: 829  YGYVMRKGARWYSMEMAGVVTYTGAKIIQNARVLVEQIGKPLELDTDGIWCCLPGSFPEN 888

Query: 846  FTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEFEVDGP 905
            FTFKTK+  KKLTISYPCVMLNVDVA NNTNDQYQTLVDPVS+TY T SECSIEFEVDGP
Sbjct: 889  FTFKTKN-GKKLTISYPCVMLNVDVALNNTNDQYQTLVDPVSRTYATTSECSIEFEVDGP 947

Query: 906  YKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFLHG 965
            YKAMI+PASKEE +L+KKRYAVFN DGTLAELKGFEIKRRGELKLIKVFQAE+FD FLHG
Sbjct: 948  YKAMIIPASKEENVLLKKRYAVFNHDGTLAELKGFEIKRRGELKLIKVFQAEIFDNFLHG 1007

Query: 966  STIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLADYGEQKSCAVTT 1025
            +T+EECY++VAAVANRWLD+L+NQG D+ADSEL++YISESSTMSKSL DYG++KSCA TT
Sbjct: 1008 ATLEECYASVAAVANRWLDMLENQGIDVADSELLEYISESSTMSKSLEDYGDRKSCATTT 1067

Query: 1026 ARRLSDFLGDTMVKDKGLRCQYIVACEPQGTPVSERAVPVAIFETDAEIMKFYLRKWCKT 1085
            ARRL+DFLGD MVKDKGL C+YIVA +PQG PVSERA+PVAIF+ + E+M+ Y+RKWCK 
Sbjct: 1068 ARRLADFLGDEMVKDKGLSCRYIVARDPQGAPVSERAIPVAIFDAEPEVMRVYVRKWCKC 1127

Query: 1086 SSDVGIRSIVDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLYKKVREKEDKF 1145
            S+DV IRSIVDW YY+QRL+SAIQKIITIPAA+QKV+NPVPRVVHPDWL+K++REK+DK+
Sbjct: 1128 SADVAIRSIVDWGYYRQRLNSAIQKIITIPAALQKVANPVPRVVHPDWLWKRIREKDDKY 1187

Query: 1146 RQRKLVDIFSSLKKDDFLNKTCNAETNLMDENVE-DLEDFPKKRRNSVNGPRPIVRCFEV 1204
            RQR L D+F          K   AE  + ++  E DLED    +      PRPI+R ++ 
Sbjct: 1188 RQRNLKDMFGP--------KVAQAEEPISEDGSEADLEDMVGTKLTGRKMPRPIIRVYDK 1239

Query: 1205 NNEQKTVKTTDQVDSLRQQLEPSEVSD--QQPSSQNAIDTENIDRIVDYKGWLELKKRKW 1262
            + +   V+ T++          S + D  + P ++   +T   D+  DY+ WLE KKRKW
Sbjct: 1240 DKQISNVQMTNK----------SVIEDGIEMPPARQVRET-TPDKNDDYEAWLEHKKRKW 1288

Query: 1263 KDNLDRRKKQKLGSLRASHQANGVSESLGDMINHKEAQRRTGVGSYFRRQETAMTRCHWQ 1322
            K+  D+RK+ +  +  A +        L      K A+ + GVG++FR +E A+T  HWQ
Sbjct: 1289 KEARDKRKRSRFETSVALY-------ILFYYPCGKAARSKPGVGAFFRNREAALTHSHWQ 1341

Query: 1323 IIQLVPSSQSGVFLAWVVVEGIMVRIPITVPRLFYLNSKDPIVEKFPGRRVNKTLPHGRR 1382
            I+ L    +SG F AWV+ +G M ++P+ VPR+FYLN++    E++PG RV +TLPHGR 
Sbjct: 1342 ILHLALGQRSGEFTAWVLADGDMYKVPLKVPRVFYLNTQATNTEEYPGVRVTRTLPHGRP 1401

Query: 1383 SFNLIEVMIDEDQFRKESKKLAALLADPEVE 1413
             FNLIEV++DE+QF+   +KLAA LADPEVE
Sbjct: 1402 VFNLIEVIVDEEQFKLAGRKLAAHLADPEVE 1432



 Score =  727 bits (1876), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 343/613 (55%), Positives = 447/613 (72%), Gaps = 41/613 (6%)

Query: 1409 DPEVEVLGWQQNAAKIGMQRCAASSQWFNERISLARYAHI-------------------- 1448
            D   + LGWQ  A ++ MQRCAASS W  ERI+LARYAH+                    
Sbjct: 1618 DSNYQTLGWQPLAGRVAMQRCAASSIWLQERITLARYAHVPLGNFDSDWLLFTADTFYAR 1677

Query: 1449 --------LWISDDGVPDLGGTSEEDECFADEVHQPVLTYPGAYRKVSVELKIHHLSVNA 1500
                    LW+S+DG+PDLGG  EE+  FADE   P L +PGAYR +S+ELK+HHL+VNA
Sbjct: 1678 ALRDHMQVLWVSNDGIPDLGGVPEEEPSFADE---PALIFPGAYRSISIELKVHHLAVNA 1734

Query: 1501 LLKSNQVNEMEGGGLFGFD-QDMNSGPYNNELCGFDETTSSAPAFRVVKQLIQRCLTDAV 1559
            LLKS+Q+NE+EGG L GF+ +  ++         +DE+ S APAFR++KQL+Q  L+DAV
Sbjct: 1735 LLKSSQINELEGGALLGFNSESQDAVSLGVGQTNWDESVSCAPAFRILKQLVQGWLSDAV 1794

Query: 1560 TSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEFRKLGATIIFAN 1619
            +SGN FAD +LQHLYRWLCSP SK+HDP LHRILHK+MQKVFA+LLAE RKL ATI+FA+
Sbjct: 1795 SSGNTFADVLLQHLYRWLCSPTSKMHDPALHRILHKIMQKVFALLLAELRKLRATIVFAD 1854

Query: 1620 FSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLFMDQYNYGGIPA 1679
            FS++II TGK++++AA+ YC+ LLK L++RELFEW+ELEP  +WH+LLFMDQYNYGGI A
Sbjct: 1855 FSRIIIATGKYNMAAAQGYCEYLLKTLKSRELFEWLELEPKRYWHALLFMDQYNYGGIQA 1914

Query: 1680 RADESLDDDSQVDIVSSWNIAEYLPKEIQDHFVLVVSEFMYIPWKHAQKLAASRASLQEG 1739
            + D + +  ++  I+SSWNIAE+LPK  QD+FV++VSE++YIPWKH+Q  AA  A+ + G
Sbjct: 1915 KDDPTQNGANE--IISSWNIAEFLPKVTQDYFVVIVSEYIYIPWKHSQDQAALLAAARGG 1972

Query: 1740 --SSCTPSITVAAAENFESHIVQYVKGEISSYFTGKLLSIVRDAIHHMKKMNNDQHNSPG 1797
              +S TPS++++ A + E+  V Y+K +I+SYFT KLL +VRD   H+    +++ +   
Sbjct: 1973 DFASSTPSVSISTASDAEAQEVSYLKEQIASYFTDKLLRVVRDVQRHINARRDEEDSEAQ 2032

Query: 1798 VMQ-----TAANIHKVDAPLEFIKHVCAAFALDQNVQHDVLVMRKNLLKYVRVREFAPEA 1852
            + +       +++   D  LEFIK VCA  ALD  VQH+V+VMRKNLLK V VREF+ EA
Sbjct: 2033 LSRQFPKLAGSHLVMTDPALEFIKQVCAVLALDNRVQHNVMVMRKNLLKLVHVREFSAEA 2092

Query: 1853 EFRDPCPSFILPNVICSYCNDCRDLDLCRDMALLAQDWHCAMPQCGQPYDREVMENALLQ 1912
             F DPC SF LPNVICSYCNDCRDLDLCRD ALL  DW C +P CGQPYDR  +ENALLQ
Sbjct: 2093 AFEDPCRSFTLPNVICSYCNDCRDLDLCRDAALLEHDWRCVVPSCGQPYDRAWIENALLQ 2152

Query: 1913 IVRQRERLYHLQDLVCIRCNQVKAAHLAEQCACAGSFRCKEDASDFRSKMQIFLNIANRQ 1972
            IVRQRERLYHLQDLVC++C QVK++HLA+QC CAG+F+     + F  ++Q+FLNIA   
Sbjct: 2153 IVRQRERLYHLQDLVCVKCRQVKSSHLADQCQCAGAFKNTTSPAVFEKELQVFLNIAKYH 2212

Query: 1973 GFQLLQECTSWIL 1985
            GF+LL+E  +W++
Sbjct: 2213 GFELLEEVVTWLV 2225


>gi|297599291|ref|NP_001046939.2| Os02g0511900 [Oryza sativa Japonica Group]
 gi|255670933|dbj|BAF08853.2| Os02g0511900 [Oryza sativa Japonica Group]
          Length = 2175

 Score = 1966 bits (5092), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 985/1419 (69%), Positives = 1119/1419 (78%), Gaps = 134/1419 (9%)

Query: 14   TKKQKLIRSAEEELEAKLGYDLFSEGDKRLGWLLTFASSSLEDEDTRKVYSCIDLYFVSQ 73
             K Q+L   AEE LE++LG+  +++ ++RLGWLLTF+ SS EDEDT K+YSC+DLYFVSQ
Sbjct: 36   AKDQRLRLGAEELLESRLGFAPYTDSERRLGWLLTFSPSSWEDEDTGKIYSCVDLYFVSQ 95

Query: 74   DGSTFKSKYKFRPYFYAATKEKMEMDVEAYLRRRYESQIADIEILEKEDLDLKNHLSGLH 133
            DGSTFK KYKF PYFYAATK+KME++VEAYLRRRYE  IADIEI+EKEDLDLKNHLSGL 
Sbjct: 96   DGSTFKVKYKFPPYFYAATKDKMELEVEAYLRRRYEGDIADIEIIEKEDLDLKNHLSGLK 155

Query: 134  KSYLKISFDTVQQLMDVKKDLLHVVERNQAKFDAAEAYESILTGK-----------REQR 182
            + YLKI FDTVQQLM V+ DLLHVVE+N+ + +AAEA+ESI   K           R +R
Sbjct: 156  RKYLKIQFDTVQQLMRVRSDLLHVVEKNEEELNAAEAFESIYGVKSLCSDDLVHYDRVER 215

Query: 183  PQDFLDCIVDLREYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLLEKRVDLLQRAEVHVC 242
            PQD+++CI+DLREYDVPYH+RFAIDNDVRCGQWYDVS+SS+  LL +R DLLQRAEVHVC
Sbjct: 216  PQDYINCIIDLREYDVPYHVRFAIDNDVRCGQWYDVSVSSSDVLLHRREDLLQRAEVHVC 275

Query: 243  AFDIETTKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYF 302
            AFDIETTKLPLKFPDA+YD +MMISYM+DGQGYLIINRECVGEDIEDLEYTPKPEFEG+F
Sbjct: 276  AFDIETTKLPLKFPDAEYDTVMMISYMIDGQGYLIINRECVGEDIEDLEYTPKPEFEGHF 335

Query: 303  KVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCD 362
            KV NV NE++LL+ WF+HMQEVKPGIYVTYNGD+FDWPFLE RAAHHG KM+EE+GFQCD
Sbjct: 336  KVKNVANELDLLKAWFSHMQEVKPGIYVTYNGDFFDWPFLEKRAAHHGIKMNEEIGFQCD 395

Query: 363  KNQGECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEK 422
             NQGECRAKF+CHLDCFAWVKRDSYLPQGS GLKAVTKAKLGYDPLEVNPEDMVRFA E+
Sbjct: 396  NNQGECRAKFSCHLDCFAWVKRDSYLPQGSHGLKAVTKAKLGYDPLEVNPEDMVRFAMEQ 455

Query: 423  PQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYK 482
            PQ MASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQA+K
Sbjct: 456  PQTMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAFK 515

Query: 483  ANVICPNKHQSDPEKFYRNHLLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQLLN 542
            AN+ICPNKHQ+D EKFY N LLESETYIGGHVECLE+GVFRSDLPT F+L+PSA EQL+ 
Sbjct: 516  ANIICPNKHQADLEKFYNNRLLESETYIGGHVECLETGVFRSDLPTKFQLEPSACEQLIA 575

Query: 543  NLDRDLQYAIKVEGKMDLESVSNYDEVKNAIMEKLLRLQEEPIREECPLIYHLDVAAMYP 602
            NLDRDLQYAI VEGK+D++SV+NYDEVK+AI +KL+ L++ PIREECPLIYHLDVAAMYP
Sbjct: 576  NLDRDLQYAISVEGKLDIDSVTNYDEVKDAIKQKLVSLRDHPIREECPLIYHLDVAAMYP 635

Query: 603  NIILTNRLQPPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYYHLKKQIES 662
            NIILTNRLQPPSIVTD  CTACDFNRPGK CLR LEWVWRGE +M K+SDY+H+K+QIES
Sbjct: 636  NIILTNRLQPPSIVTDVDCTACDFNRPGKNCLRTLEWVWRGETYMAKKSDYHHIKRQIES 695

Query: 663  EFVDGTNGHLSKSFLDLPKMEQQSRLKDRLKKYCQKAYKRVLDKPVTELREAGICMRENS 722
            E +       SK FLDL K E   +LKDRLKKYCQKAYKRV+DKP+TE+R AGICMRENS
Sbjct: 696  EMIQAGGVTPSKPFLDLSKPEHLLKLKDRLKKYCQKAYKRVVDKPITEVRNAGICMRENS 755

Query: 723  FYVDTVRSFRDRRYEYKGLNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHKCIL 782
            FYVDTVRSFRDRRYEYKGLNK WKGKL+EAKA+GNSIKIQEAQDMVVLYDSLQLAH    
Sbjct: 756  FYVDTVRSFRDRRYEYKGLNKSWKGKLAEAKANGNSIKIQEAQDMVVLYDSLQLAH---- 811

Query: 783  NSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLPGSF 842
                     KGARWYSMEMAGVVTYTGAKIIQNARLL++KIGKPLELDTDGIWCVLPGSF
Sbjct: 812  ---------KGARWYSMEMAGVVTYTGAKIIQNARLLVDKIGKPLELDTDGIWCVLPGSF 862

Query: 843  PENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEFEV 902
            PENFTFKT +  KKLTISYPCVMLNVDVARNNTNDQYQTL DPV+K Y THSECSIEFEV
Sbjct: 863  PENFTFKT-NAGKKLTISYPCVMLNVDVARNNTNDQYQTLNDPVNKLYTTHSECSIEFEV 921

Query: 903  DGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKF 962
            DGPYKAMILPASKEEG+L+KKRYAVFN+DGTLAELKGFEIKRRGELKLIKVFQAE+FD+F
Sbjct: 922  DGPYKAMILPASKEEGVLLKKRYAVFNEDGTLAELKGFEIKRRGELKLIKVFQAEVFDRF 981

Query: 963  LHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLADYGEQKSCA 1022
            LHGST+EECY+AVA+VANRWLDLLDNQG DI+D+EL+D+ISESSTMSKSL DYGEQKSCA
Sbjct: 982  LHGSTLEECYTAVASVANRWLDLLDNQGIDISDNELLDFISESSTMSKSLVDYGEQKSCA 1041

Query: 1023 VTTARRLSDFLGDTMVKDKGLRCQYIVACEPQGTPVSERAVPVAIFETDAEIMKFYLRKW 1082
            VTTA+RL++FLGD+MVKDKGL CQYIVA EPQGTPVSERA+PVAIFETDA +        
Sbjct: 1042 VTTAKRLAEFLGDSMVKDKGLHCQYIVAREPQGTPVSERAIPVAIFETDAVLHP------ 1095

Query: 1083 CKTSSDVGIRSIVDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLYKKVREKE 1142
                         DW + K R                                    EK+
Sbjct: 1096 -------------DWLHKKVR------------------------------------EKD 1106

Query: 1143 DKFRQRKLVDIFSSLKKDDFLNKTCNAETNLMDENVEDLEDF-----PKKRRNSVNGPRP 1197
            D+FRQRKL D+F+ L+KD           NL  +   D+ED        ++ +  NG   
Sbjct: 1107 DRFRQRKLRDMFNPLEKD-------RGVQNL--DGTGDMEDLLTLDGGMRKSHVPNG--- 1154

Query: 1198 IVRCFEVNNEQKTVKTTDQVDSLRQQLEPSEVSDQQPSS---QNAIDTENIDRIVDYKGW 1254
                F   N+     +T+      +  + S     +P +   QN    E +DR  DY+GW
Sbjct: 1155 ----FGKENKPNDAPSTEAGSKHSKNKQKSITRSNEPLAVHIQNDAADEQVDRSTDYQGW 1210

Query: 1255 LELKKRKWKDNLDRRKKQKLGSLRASHQANGVSESLGDMINHKEAQRRTGVGSYFRRQET 1314
            L+ KKRKWK   +++K+Q+LG   A+  ++G +  L    N                   
Sbjct: 1211 LDAKKRKWKYVREQKKRQRLG---AAVTSDGPTNDLFSARN------------------- 1248

Query: 1315 AMTRCHWQIIQLVPSSQSGVFLAWVVVEGIMVRIPITVPRLFYLNSKDPIVEKFPGRRVN 1374
                    IIQL  S+  G F AWVV EGIM +IPI VPR+FYLNSK P+ E+FPGRRV 
Sbjct: 1249 --------IIQLASSTLPGHFFAWVVAEGIMFKIPINVPRVFYLNSKAPVTEEFPGRRVK 1300

Query: 1375 KTLPHGRRSFNLIEVMIDEDQFRKESKKLAALLADPEVE 1413
            K LPHGR  FNLIEV+  E+QFR E KKLAA LA+P+VE
Sbjct: 1301 KILPHGRPCFNLIEVVTSEEQFRVEGKKLAAHLAEPDVE 1339



 Score =  851 bits (2199), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 397/612 (64%), Positives = 475/612 (77%), Gaps = 34/612 (5%)

Query: 1409 DPEVEVLGWQQNAAKIGMQRCAASSQWFNERISLARYAHI-------------------- 1448
            D   + LGWQ  A +  MQRCAAS+QWFNERISLARYAH+                    
Sbjct: 1522 DNNYQALGWQATAGRTSMQRCAASTQWFNERISLARYAHVPLGNFELDWLLFTADVFFSR 1581

Query: 1449 --------LWISDDGVPDLGGTSEEDECFADEVHQPVLTYPGAYRKVSVELKIHHLSVNA 1500
                    LWISDDG+PDLGGT E D CFADEV QP LTYPGAYR+V+VELKIHHL+VN+
Sbjct: 1582 ALRDQQQVLWISDDGIPDLGGTYEGDTCFADEVIQPALTYPGAYRRVAVELKIHHLAVNS 1641

Query: 1501 LLKSNQVNEMEGGGLFGFDQDMNSGPYNNELCGFDETTSSAPAFRVVKQLIQRCLTDAVT 1560
            LLKS+QV+EMEGG +  F  DM +GP   E   FD+ T   PAF+V+KQLIQRC++DAV+
Sbjct: 1642 LLKSSQVDEMEGGPIGSFANDMPAGPNGTE-TEFDDATLCLPAFQVLKQLIQRCISDAVS 1700

Query: 1561 SGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEFRKLGATIIFANF 1620
            SGNVFADAILQHLYRWLCSP SKLHDP LH +LH VM+KVFA++LAEFRKLGA +IFANF
Sbjct: 1701 SGNVFADAILQHLYRWLCSPRSKLHDPALHHLLHNVMKKVFALMLAEFRKLGANVIFANF 1760

Query: 1621 SKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLFMDQYNYGGIPAR 1680
            SK+IIDTGK DL +A+AYCDSLLK LQTR++FEW+ELEP+H+WHSLLFMDQYNYGGI A+
Sbjct: 1761 SKIIIDTGKVDLLSARAYCDSLLKTLQTRDIFEWVELEPLHYWHSLLFMDQYNYGGIQAK 1820

Query: 1681 -----ADESLDDDSQVDIVSSWNIAEYLPKEIQDHFVLVVSEFMYIPWKHAQKLAASRAS 1735
                 ++ S D D+ +DIVSSWNIAEYLPK  QDHFVL+VSEF+Y+PWK+ ++  A R++
Sbjct: 1821 MQNATSEGSSDGDNDIDIVSSWNIAEYLPKATQDHFVLIVSEFLYVPWKYMKEQVALRST 1880

Query: 1736 LQEGSSCTPSITVAAAENFESHIVQYVKGEISSYFTGKLLSIVRDAIHHMKKMNNDQHNS 1795
             ++ +SCTPSIT+ AAEN E  ++ Y++ +IS+YF  KLL IV D +HH K     +   
Sbjct: 1881 TRDETSCTPSITIMAAENLEVQVIGYLRDQISNYFADKLLRIVSDILHHFKGKGKSESVE 1940

Query: 1796 PGVMQTAANIHKVDAPLEFIKHVCAAFALDQNVQHDVLVMRKNLLKYVRVREFAPEAEFR 1855
                +   + HK DA LEFIKH+CA  ALDQNVQHD+L MRKNLLK VRV+EFAPEA+F+
Sbjct: 1941 LTNREPDPHTHKGDAALEFIKHICAVLALDQNVQHDILRMRKNLLKLVRVKEFAPEAQFQ 2000

Query: 1856 DPCPSFILPNVICSYCNDCRDLDLCRDMALLAQDWHCAMPQCGQPYDREVMENALLQIVR 1915
            DPC SF LPNVICSYCNDCRDLDLCRD  L  Q+W CA+PQCGQPY RE MENALLQ+VR
Sbjct: 2001 DPCASFTLPNVICSYCNDCRDLDLCRDSTLQGQEWRCAVPQCGQPYHREQMENALLQVVR 2060

Query: 1916 QRERLYHLQDLVCIRCNQVKAAHLAEQCACAGSFRCKEDASDFRSKMQIFLNIANRQGFQ 1975
            QRERLYHLQDLVC+RC QVKAAHL+EQC+C G+FRCKE++S F SKM++FLN+A  Q F+
Sbjct: 2061 QRERLYHLQDLVCLRCRQVKAAHLSEQCSCGGAFRCKEESSQFLSKMRVFLNVAVSQKFE 2120

Query: 1976 LLQECTSWILEV 1987
            LLQ+   WILEV
Sbjct: 2121 LLQDVVQWILEV 2132


>gi|357142392|ref|XP_003572557.1| PREDICTED: DNA polymerase epsilon catalytic subunit A [Brachypodium
            distachyon]
          Length = 2127

 Score = 1964 bits (5089), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 984/1417 (69%), Positives = 1116/1417 (78%), Gaps = 134/1417 (9%)

Query: 14   TKKQKLIRSAEEELEAKLGYDLFSEGDKRLGWLLTFASSSLEDEDTRKVYSCIDLYFVSQ 73
             K+Q+L   AEE LE++LG+  ++EG++RLGWLLTF+ SS EDEDT K+YSC+DLYFVSQ
Sbjct: 34   AKEQRLRLGAEELLESRLGFAPYTEGERRLGWLLTFSPSSWEDEDTGKIYSCVDLYFVSQ 93

Query: 74   DGSTFKSKYKFRPYFYAATKEKMEMDVEAYLRRRYESQIADIEILEKEDLDLKNHLSGLH 133
            DGSTFK KYKF PYFYAATKEKME++VEAYLRRRYE +I+DIEI+EKEDLDLKNHLSGL 
Sbjct: 94   DGSTFKVKYKFPPYFYAATKEKMELEVEAYLRRRYEGEISDIEIIEKEDLDLKNHLSGLK 153

Query: 134  KSYLKISFDTVQQLMDVKKDLLHVVERNQAKFDAAEAYESILTGKRE---------QRPQ 184
            + YLKI FDTVQQLM V+ DLLHVVE+N+ + DA +A+ESI   KR          +RPQ
Sbjct: 154  RKYLKIQFDTVQQLMRVRNDLLHVVEKNEEERDAVDAFESIYGVKRSVDLVHYDRVERPQ 213

Query: 185  DFLDCIVDLREYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLLEKRVDLLQRAEVHVCAF 244
            D+++CI+DLREYDVPYH+RFA DNDVR GQWY+V +S +  LL++R DLLQRAEVHVCAF
Sbjct: 214  DYINCIIDLREYDVPYHVRFATDNDVRSGQWYNVGVSGSDVLLQRREDLLQRAEVHVCAF 273

Query: 245  DIETTKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKV 304
            DIETTKLPLKFPDA+YD +MMISYM+DGQGYLIINRECVGEDIEDLEYTPKPEFEGYF+V
Sbjct: 274  DIETTKLPLKFPDAEYDSVMMISYMIDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFRV 333

Query: 305  TNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDKN 364
             NV NE++LL+ WF+HMQEVKPGIYVTYNGD+FDWPFLE RAAHHG KM+EE+GFQCD N
Sbjct: 334  KNVANEVDLLKAWFSHMQEVKPGIYVTYNGDFFDWPFLEKRAAHHGIKMNEEIGFQCDDN 393

Query: 365  QGECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQ 424
            QGECRAKF+CHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFA E+PQ
Sbjct: 394  QGECRAKFSCHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAMEQPQ 453

Query: 425  MMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKAN 484
             MASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQA+KAN
Sbjct: 454  TMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAFKAN 513

Query: 485  VICPNKHQSDPEKFYRNHLLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQLLNNL 544
            +ICPNKHQ+D EKFY N L+ESETYIGGHVECLE+GVFRSDLPT F+L+PSAYEQL+ NL
Sbjct: 514  IICPNKHQADLEKFYNNRLVESETYIGGHVECLETGVFRSDLPTKFQLEPSAYEQLIENL 573

Query: 545  DRDLQYAIKVEGKMDLESVSNYDEVKNAIMEKLLRLQEEPIREECPLIYHLDVAAMYPNI 604
            DRDLQY+I VEGK+D+ SV+NYDEVK+AI +KL+ L++ P REECPLIYHLDVAAMYPNI
Sbjct: 574  DRDLQYSISVEGKLDINSVTNYDEVKDAIKQKLISLRDHPTREECPLIYHLDVAAMYPNI 633

Query: 605  ILTNRLQPPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYYHLKKQIESEF 664
            ILTNRLQPPSIVTD  CTACDFNRPGK CLR LEWVWRGE +M K+SDY+H+K+QIESE 
Sbjct: 634  ILTNRLQPPSIVTDVDCTACDFNRPGKNCLRTLEWVWRGETYMAKKSDYHHIKRQIESEM 693

Query: 665  VDGTNGHLSKSFLDLPKMEQQSRLKDRLKKYCQKAYKRVLDKPVTELREAGICMRENSFY 724
            +       SK FLDL K E   +LKDRLKKYCQKAY+RV+DKP+TE+REAGICMRENSFY
Sbjct: 694  IQAGGTTSSKPFLDLSKPEHLLKLKDRLKKYCQKAYRRVVDKPITEVREAGICMRENSFY 753

Query: 725  VDTVRSFRDRRYEYKGLNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHKCILNS 784
            VDTVRSFRDRRYEYKGLNK WKGKL+EAKASGNSIKIQEAQDMVVL+DSLQLAH      
Sbjct: 754  VDTVRSFRDRRYEYKGLNKTWKGKLAEAKASGNSIKIQEAQDMVVLFDSLQLAH------ 807

Query: 785  FYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLPGSFPE 844
                   KGARWYSMEMAGVVTYTGAKIIQNARLL++KIG+PLELDTDGIWCVLPGSFPE
Sbjct: 808  -------KGARWYSMEMAGVVTYTGAKIIQNARLLVDKIGRPLELDTDGIWCVLPGSFPE 860

Query: 845  NFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEFEVDG 904
            NFTFKT    KKLTISYPCVMLNVDVARNNTNDQYQTL DPV+K Y T+SECSIEFEVDG
Sbjct: 861  NFTFKTTS-GKKLTISYPCVMLNVDVARNNTNDQYQTLKDPVNKLYTTNSECSIEFEVDG 919

Query: 905  PYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFLH 964
            PYKAMILPASKEEGILIKKRYAVFN+DGTLAELKGFEIKRRGELKLIKVFQAE+FDKFLH
Sbjct: 920  PYKAMILPASKEEGILIKKRYAVFNEDGTLAELKGFEIKRRGELKLIKVFQAEVFDKFLH 979

Query: 965  GSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLADYGEQKSCAVT 1024
            GST+EECY+AVA+VANRWLDLLDNQG DI+DSEL+ +ISESSTMSKSL DYGEQKSCAVT
Sbjct: 980  GSTLEECYAAVASVANRWLDLLDNQGIDISDSELLGFISESSTMSKSLVDYGEQKSCAVT 1039

Query: 1025 TARRLSDFLGDTMVKDKGLRCQYIVACEPQGTPVSERAVPVAIFETDAEIMKFYLRKWCK 1084
            TA+RL++FLGD+MVKDKGL CQYIVA EPQGTPVSERAVPVAIFETD  +          
Sbjct: 1040 TAKRLAEFLGDSMVKDKGLHCQYIVAREPQGTPVSERAVPVAIFETDDVLHP-------- 1091

Query: 1085 TSSDVGIRSIVDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLYKKVREKEDK 1144
                       DW + K R                                    EK+D+
Sbjct: 1092 -----------DWLHKKVR------------------------------------EKDDR 1104

Query: 1145 FRQRKLVDIFSSLKKD---DFLNKTCNAETNLMDEN----VEDLEDFPKKRRNSVNG-PR 1196
            FRQRKL D+FS L KD     LN T + E  L   N          F   + N  NG P 
Sbjct: 1105 FRQRKLHDMFSPLDKDRGMQNLNGTGDMEDFLTPNNGLRKAAASHGFNIGKENRRNGPPS 1164

Query: 1197 PIVRCFEVNNEQKTVKTTDQVDSLRQQLEPSEVSDQQPSSQNAIDTENIDRIVDYKGWLE 1256
                     N+QK+V  ++                 +P   ++ D E +DR  DY+GWL+
Sbjct: 1165 EEAGSHRSKNQQKSVTRSN-----------------EPLRDDSAD-ERVDRSTDYQGWLD 1206

Query: 1257 LKKRKWKDNLDRRKKQKLGSLRASHQANGVSESLGDMINHKEAQRRTGVGSYFRRQETAM 1316
             +KRKWK+  +++K+++LGS  +S    G +  L    N                     
Sbjct: 1207 ARKRKWKNVREQKKRRRLGSAASSE---GPTNGLFSARN--------------------- 1242

Query: 1317 TRCHWQIIQLVPSSQSGVFLAWVVVEGIMVRIPITVPRLFYLNSKDPIVEKFPGRRVNKT 1376
                  IIQL PS+  G F AWVV +GIM +IPI VPR+FYLNSK P+ E+FPGRRV K 
Sbjct: 1243 ------IIQLAPSTLPGRFFAWVVADGIMFKIPINVPRVFYLNSKAPVTEEFPGRRVKKI 1296

Query: 1377 LPHGRRSFNLIEVMIDEDQFRKESKKLAALLADPEVE 1413
            LPHGR  FNLIEV+  E+QFR E KKLAA LA+P+VE
Sbjct: 1297 LPHGRPCFNLIEVVTSEEQFRAEGKKLAAHLAEPDVE 1333



 Score =  849 bits (2194), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 397/614 (64%), Positives = 476/614 (77%), Gaps = 36/614 (5%)

Query: 1409 DPEVEVLGWQQNAAKIGMQRCAASSQWFNERISLARYAHI-------------------- 1448
            D   + LGWQ  A +  MQRCAAS+QWFNERI+LARYAH+                    
Sbjct: 1516 DNNYQALGWQATAGRTSMQRCAASTQWFNERIALARYAHVPLGNFELDWLLFTADVFFSR 1575

Query: 1449 --------LWISDDGVPDLGGTSEEDECFADEVHQPVLTYPGAYRKVSVELKIHHLSVNA 1500
                    LWISDDG+PDLGGT E D CFADEV QP LTYPGAYR+V+VELKIHHL+VN+
Sbjct: 1576 ALHDQQQVLWISDDGIPDLGGTYEGDTCFADEVIQPSLTYPGAYRRVAVELKIHHLAVNS 1635

Query: 1501 LLKSNQVNEMEGGGLFGFDQDMNSGPYNNELCGFDETTSSAPAFRVVKQLIQRCLTDAVT 1560
            LLKS+QV+EMEGG +  F+ D+  G +  E    ++ +   PAF+V+KQLIQRC++DAV+
Sbjct: 1636 LLKSSQVDEMEGGSIGSFENDIPPGLHATE-TDCNDASLCLPAFQVLKQLIQRCISDAVS 1694

Query: 1561 SGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEFRKLGATIIFANF 1620
            SGNVFADAILQHLYRWLCSP SKLHDP LHR+LH VM+KVFA+L+AEFRKLGA +IFANF
Sbjct: 1695 SGNVFADAILQHLYRWLCSPRSKLHDPALHRLLHNVMKKVFALLVAEFRKLGANVIFANF 1754

Query: 1621 SKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLFMDQYNYGGIPAR 1680
            SK+IIDTGK DL +A+AYCDSLLK LQTR+LFEWIELEP+H+WHSLLFMDQYNYGGI A+
Sbjct: 1755 SKIIIDTGKADLPSARAYCDSLLKTLQTRDLFEWIELEPLHYWHSLLFMDQYNYGGIQAK 1814

Query: 1681 A------DESLDDDSQVDIVSSWNIAEYLPKEIQDHFVLVVSEFMYIPWKHAQKLAASRA 1734
                   DES D D+ +DIVSSWNIAEYLPK  QDHFVL+VSEF+YIPWK+ ++  A RA
Sbjct: 1815 TQNLTSEDES-DGDNDIDIVSSWNIAEYLPKATQDHFVLIVSEFLYIPWKYMKEEVAKRA 1873

Query: 1735 SLQEGSSCTPSITVAAAENFESHIVQYVKGEISSYFTGKLLSIVRDAIHHMKKMNNDQHN 1794
            + ++ +SCTPSIT+ AAEN E  ++ Y++G++S YF  KLL+IV D +HH K     +  
Sbjct: 1874 ATRDDTSCTPSITIMAAENLEGQVIAYLRGQVSGYFASKLLTIVDDILHHFKGKGKSESV 1933

Query: 1795 SPGVMQTAANIHKVDAPLEFIKHVCAAFALDQNVQHDVLVMRKNLLKYVRVREFAPEAEF 1854
                 +   +  K DA LEFIKH+CA  ALDQNVQHD+L MRKNLLK VRV+EFAPEA+F
Sbjct: 1934 ESASREPDPHTQKGDAALEFIKHICAVLALDQNVQHDILRMRKNLLKLVRVKEFAPEAQF 1993

Query: 1855 RDPCPSFILPNVICSYCNDCRDLDLCRDMALLAQDWHCAMPQCGQPYDREVMENALLQIV 1914
            +DPC SF LPNVICSYCNDCRDLDLCRD AL   +W CA+PQCGQPY RE MENALLQ+V
Sbjct: 1994 QDPCASFTLPNVICSYCNDCRDLDLCRDSALQGHEWRCAVPQCGQPYHREQMENALLQVV 2053

Query: 1915 RQRERLYHLQDLVCIRCNQVKAAHLAEQCACAGSFRCKEDASDFRSKMQIFLNIANRQGF 1974
            RQRERLYHLQDLVC+RC QVKAAH++EQC+C GSFRCKE++S F SKM++FL +A  Q F
Sbjct: 2054 RQRERLYHLQDLVCLRCRQVKAAHVSEQCSCGGSFRCKEESSYFLSKMRVFLKVAVSQKF 2113

Query: 1975 QLLQECTSWILEVQ 1988
            +LLQ+C  WILEV+
Sbjct: 2114 ELLQDCVQWILEVR 2127


>gi|302784532|ref|XP_002974038.1| hypothetical protein SELMODRAFT_442263 [Selaginella moellendorffii]
 gi|300158370|gb|EFJ24993.1| hypothetical protein SELMODRAFT_442263 [Selaginella moellendorffii]
          Length = 2412

 Score = 1905 bits (4936), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 924/1410 (65%), Positives = 1099/1410 (77%), Gaps = 68/1410 (4%)

Query: 11   GRRTKKQKLIRSAEEELEAKLGYDLFSEGDKRLGWLLTFASSSLEDEDTRKVYSCIDLYF 70
            GR     + +  A+   E K G+ LF+EGD +LGWLL     S ++E   + +SC++L F
Sbjct: 2    GRGDGALRALAMAKGAAEEKFGFGLFTEGDPKLGWLLNM---SPDEECGNQTFSCVNLCF 58

Query: 71   VSQDGSTFKSKYKFRPYFYAATKEKMEMDVEAYLRRRYESQIADIEILEKEDLDLKNHLS 130
            + QDGS FK++ KF PYFY   K  ME+++E+Y+RRR+E  I++ +I+EKEDLDLKNHLS
Sbjct: 59   LCQDGSGFKTRVKFAPYFYIGAKIGMELELESYIRRRFEGLISNTKIVEKEDLDLKNHLS 118

Query: 131  GLHKSYLKISFDTVQQLMDVKKDLLHVVERNQAKFDAAEAYESILTG-----KREQRPQD 185
            GL K ++KISF+TVQ LM VK DL+ +V RNQAK +A EAYES+L G     + + +  D
Sbjct: 119  GLRKRFIKISFNTVQDLMQVKSDLMPIVARNQAKLEAVEAYESVLYGLSTEKQNKSKVYD 178

Query: 186  FLDCIVDLREYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLLEKRVDLLQRAEVHVCAFD 245
            + +CIVD+RE+DVPYH+RFAIDNDVRCG+WY V++ +    LEKR DLLQRAE  VCAFD
Sbjct: 179  YNECIVDIREFDVPYHVRFAIDNDVRCGEWYVVTVDAARTKLEKRPDLLQRAEARVCAFD 238

Query: 246  IETTKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVT 305
            IE TKLPLKFPDA YD +MMISYM+D QGYLIINRECV EDI+D+EYTPKPEFEG+FKV 
Sbjct: 239  IEATKLPLKFPDASYDSVMMISYMVDSQGYLIINRECVSEDIDDIEYTPKPEFEGHFKVR 298

Query: 306  NVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDKNQ 365
            N  +E ELL  WF HM+E+KP I+VTYNGD+FDWPF+E RA HHG  M ++LGF CD  Q
Sbjct: 299  NAASEKELLEWWFDHMREIKPNIFVTYNGDFFDWPFIEERAKHHGLSMRDKLGFSCDSAQ 358

Query: 366  GECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQM 425
            GEC +KFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFA E+PQ 
Sbjct: 359  GECLSKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFASEQPQK 418

Query: 426  MASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANV 485
            MA+YSVSDAVATYYLYMTYV+PFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQA+K N+
Sbjct: 419  MAAYSVSDAVATYYLYMTYVNPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAFKGNI 478

Query: 486  ICPNKHQSDPEKFYRNHLLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQLLNNLD 545
            ICPNKH+S+PE+FY   LL+SETYIGGHVECLESGVFRSDLPT F+L P AY++L++NLD
Sbjct: 479  ICPNKHKSEPERFYSGRLLDSETYIGGHVECLESGVFRSDLPTRFRLVPEAYQKLVDNLD 538

Query: 546  RDLQYAIKVEGKMDLESVSNYDEVKNAIMEKLLRLQEEPIREECPLIYHLDVAAMYPNII 605
            RDL YAI+ EGKM+ + V+NYDEVK  I   L  L++ P REE P+IYHLDVAAMYPNII
Sbjct: 539  RDLLYAIEKEGKMNAQEVTNYDEVKKEIKSMLENLRDVPNREEQPVIYHLDVAAMYPNII 598

Query: 606  LTNRLQPPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYYHLKKQIESEFV 665
            LTNRLQPPSIVTDE C ACDFNR  KTCLR ++WVWRGE FM KRS+YYHLK QIESE  
Sbjct: 599  LTNRLQPPSIVTDETCAACDFNRAEKTCLRPMQWVWRGESFMTKRSEYYHLKNQIESEMF 658

Query: 666  DGTNGHLSKSFLDLPKMEQQSRLKDRLKKYCQKAYKRVLDKPVTELREAGICMRENSFYV 725
                G  S+ F DL K EQQS+L+DRLKKYCQK YKRVLDKP TE R AG+CMRENSFYV
Sbjct: 659  TAGEGKPSQYFRDLSKDEQQSKLRDRLKKYCQKVYKRVLDKPTTEQRVAGVCMRENSFYV 718

Query: 726  DTVRSFRDRRYEYKGLNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHKCILNSF 785
            DTVRSFRDRRYEYK LNKVWKGKL+EAK+SGNSIKIQEAQ  V L  +  L H CILNSF
Sbjct: 719  DTVRSFRDRRYEYKTLNKVWKGKLTEAKSSGNSIKIQEAQ--VAL--TCCLLH-CILNSF 773

Query: 786  YGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLPGSFPEN 845
            YGYVMRKGARWYSMEMAG+VTYTGAKIIQNAR+L+E+IGKPLELDTDGIWC LP SFPEN
Sbjct: 774  YGYVMRKGARWYSMEMAGIVTYTGAKIIQNARILVEQIGKPLELDTDGIWCALPASFPEN 833

Query: 846  FTFKTKD--LKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEFEVD 903
            F F+T      KKL ISYPCVMLNVDVA NNTN QYQTL D   +TY T SECSIEFEVD
Sbjct: 834  FVFRTNPPIRDKKLPISYPCVMLNVDVALNNTNHQYQTLADATERTYRTSSECSIEFEVD 893

Query: 904  GPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFL 963
            GPYKAMILPASKEEG+LIKKRYAVFNDDGTLAELKGFE+KRRGELKLIKVFQAE+F+KFL
Sbjct: 894  GPYKAMILPASKEEGVLIKKRYAVFNDDGTLAELKGFEVKRRGELKLIKVFQAEVFEKFL 953

Query: 964  HGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLADYGEQKSCAV 1023
             GST+EECY AVAAVA+RWLD+L+NQG D+ADSEL+DYISESSTMSKSLADYG++KSCA 
Sbjct: 954  QGSTLEECYDAVAAVADRWLDMLENQGADVADSELLDYISESSTMSKSLADYGDKKSCAT 1013

Query: 1024 TTARRLSDFLGDTMVKDKGLRCQYIVACEPQGTPVSERAVPVAIFETDAEIMKFYLRKWC 1083
            TTA+RL+DFLG+ MVKDKGL C+YIVA +PQG+PVSERAVPVAIFET+AE+M+ YLRKWC
Sbjct: 1014 TTAKRLADFLGEAMVKDKGLSCRYIVARDPQGSPVSERAVPVAIFETEAEVMRAYLRKWC 1073

Query: 1084 KTSSDVGIRSIVDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLYKKVREKED 1143
            K S+D   RSIVDWSYY+QRL+S IQKIITIPAAMQKV+NPVPRV HPDWL+K+VREK+D
Sbjct: 1074 KVSADADFRSIVDWSYYRQRLASTIQKIITIPAAMQKVANPVPRVSHPDWLWKRVREKDD 1133

Query: 1144 KFRQRKLVDIFSSLKKDDFLNKTCNAETNLMDENVEDLEDFPKKRRNSVNGPRPIVRCFE 1203
            K+RQ+ + D F  +   D  N+            V DLED        + G +       
Sbjct: 1134 KYRQKSIFDAFKPITNADVDNEAL----------VGDLED--------ICGGKETCSSKG 1175

Query: 1204 VNNEQKTVKTTDQVDSLRQQLEPSEVSDQQPSSQNAIDTENIDRIVDYKGWLELKKRKWK 1263
            +N E +T  T +         EP   SD                  DY  WL+ +KRKWK
Sbjct: 1176 LNAEVETAATANT--------EPLCTSDGD----------------DYGAWLDKRKRKWK 1211

Query: 1264 DNLDRRKKQKLGSLRASHQANGVSESLGDMINHKEAQRRTGVGSYFRRQETAMTRCHWQI 1323
            D  ++RK+ + G     H  N ++ S          ++   V ++F+ +E ++TR HW++
Sbjct: 1212 DVREKRKRLRQGP-EPRHTDNRLNRS----------KKGNSVNTFFQNREASLTRSHWEV 1260

Query: 1324 IQLVPSSQSGVFLAWVVVEGIMVRIPITVPRLFYLNSKDPIVEKFPGRRVNKTLPHGRRS 1383
            +Q   + + G F+AWVV    M ++P+ V R+FYLN++  + E +PG+RV++ LPHG+  
Sbjct: 1261 LQFEATEKPGDFIAWVVAGSSMYKVPVKVSRVFYLNTRALVSEDYPGKRVSRVLPHGKAC 1320

Query: 1384 FNLIEVMIDEDQFRKESKKLAALLADPEVE 1413
            FNLIEV++DE+Q+++  K + A L+DPEVE
Sbjct: 1321 FNLIEVILDEEQYKQAKKDVVAHLSDPEVE 1350



 Score =  654 bits (1688), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 340/635 (53%), Positives = 422/635 (66%), Gaps = 59/635 (9%)

Query: 1370 GRRVNKTLPHGRRSFNLIEVMIDEDQFRKESKKLA-ALLADPEVEV-----------LGW 1417
            GRR+ +TL      F    V I E    +    L  A+L  P V+V           LGW
Sbjct: 1490 GRRLQRTLHDYLDQFRRPAVAIVECPSMENIMALVPAILEVPRVQVPWNSRHSDYKLLGW 1549

Query: 1418 QQNAAKIGMQRCAASSQWFNERISLARYAHI----------------------------L 1449
            Q  AAK+ MQRCAAS  W +ERI+L RYAH+                            L
Sbjct: 1550 QPVAAKLAMQRCAASPSWLSERIALCRYAHVPLGNLDSDWILFTADAFYARVLKDNQHVL 1609

Query: 1450 WISDDGVPDLGGTSEEDECFADEVHQPVLTYPGAYRKVSVELKIHHLSVNALLKSNQVNE 1509
            WISDDG+PDLGG  +++  F D V QP L YPGAYR V++ELKI+HL+VNALLKS QVNE
Sbjct: 1610 WISDDGLPDLGGVPQDEPSFTDVVQQPSLCYPGAYRSVTIELKINHLAVNALLKSTQVNE 1669

Query: 1510 MEGGGLFGFDQDMNSGPYNNELCGFDETTSSAPAFRVVKQLIQRCLTDAVTSGNVFADAI 1569
            +EGG L GF+ D            +DET S APAF ++KQ++ R LT            +
Sbjct: 1670 LEGGALLGFELDATGSNLRQVGGSWDETNSCAPAFGLLKQMVLRPLT------------V 1717

Query: 1570 LQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEFRKLGATIIFANFSKVIIDTGK 1629
            L  +    CSP SKLHDP LHR+LHKVMQKV+A+LLAE RKLGATI++ +FS++II TGK
Sbjct: 1718 LMLILTLCCSPLSKLHDPSLHRLLHKVMQKVYALLLAELRKLGATIVYGSFSRIIIGTGK 1777

Query: 1630 FDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLFMDQYNYGGIPARADESLDDDS 1689
             ++ AAK YCD LLK LQTRE+FEWIELEP  +WHS+LFMDQYNYG I A+   S D+  
Sbjct: 1778 HNVEAAKNYCDHLLKTLQTREMFEWIELEPQRYWHSILFMDQYNYGAIQAKVS-SEDNSE 1836

Query: 1690 QVDIVSSWNIAEYLPKEIQDHFVLVVSEFMYIPWKHAQKLAASRASLQEGSSCTPSITVA 1749
            + +IVSSWNIAEYLPK IQ+ F++VVSEF+Y+PWKHAQ+  A+R+      S T S+TVA
Sbjct: 1837 EFEIVSSWNIAEYLPKAIQEFFIVVVSEFIYLPWKHAQETIAARSF---SFSSTQSVTVA 1893

Query: 1750 AAENFESHIVQYVKGEISSYFTGKLLSIVRDAIHHMKKMNN-DQHNSPGVMQTAANIHKV 1808
            AA + ++    ++K +I SYFT KLL IVRD   H     + D    P +    +++   
Sbjct: 1894 AAADADALETSFLKEQIESYFTDKLLRIVRDIQRHFTASRDADDFKFPNL--AGSHLALG 1951

Query: 1809 DAPLEFIKHVCAAFALDQNVQHDVLVMRKNLLKYVRVREFAPEAEFRDPCPSFILPNVIC 1868
            DA LEFIK++ AA +LD  VQH V VMRKNLL+ V VREFAPEA+F DPC SF LPNVIC
Sbjct: 1952 DAALEFIKYIYAAMSLDHRVQHSVQVMRKNLLRLVHVREFAPEAQFHDPCLSFTLPNVIC 2011

Query: 1869 SYCNDCRDLDLCRDMALLAQDWHCAMPQCGQPYDREVMENALLQIVRQRERLYHLQDLVC 1928
            SYCNDCRDLDLCRD ALL +DWHC +PQCGQ Y+ + +ENALLQIVRQRERLYHLQDL C
Sbjct: 2012 SYCNDCRDLDLCRDAALLQKDWHCTVPQCGQMYNVQWIENALLQIVRQRERLYHLQDLKC 2071

Query: 1929 IRCNQVKAAHLAEQCACAGSFRCKEDASDFRSKMQ 1963
            ++C Q+KAAH+ EQC+C GSF C E  ++F S ++
Sbjct: 2072 VKCRQIKAAHITEQCSCGGSFECVEKPAEFMSALR 2106


>gi|302803402|ref|XP_002983454.1| hypothetical protein SELMODRAFT_445541 [Selaginella moellendorffii]
 gi|300148697|gb|EFJ15355.1| hypothetical protein SELMODRAFT_445541 [Selaginella moellendorffii]
          Length = 2410

 Score = 1880 bits (4869), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 911/1410 (64%), Positives = 1085/1410 (76%), Gaps = 93/1410 (6%)

Query: 11   GRRTKKQKLIRSAEEELEAKLGYDLFSEGDKRLGWLLTFASSSLEDEDTRKVYSCIDLYF 70
            GR     + +  A+   E K G+ LF+EGD +LGWLL     S ++E   + +SC++L F
Sbjct: 19   GRGDGAPRALAMAKGAAEEKFGFGLFTEGDPKLGWLLNM---SPDEECGNQTFSCVNLCF 75

Query: 71   VSQDGSTFKSKYKFRPYFYAATKEKMEMDVEAYLRRRYESQIADIEILEKEDLDLKNHLS 130
            + QDGS FK++ KF PYFY   K  ME+++E+Y+RRR+E  I++ +I+EKEDLDLKNHLS
Sbjct: 76   LCQDGSGFKTRVKFAPYFYIGAKIGMELELESYIRRRFEGLISNTKIVEKEDLDLKNHLS 135

Query: 131  GLHKSYLKISFDTVQQLMDVKKDLLHVVERNQAKFDAAEAYESILTG-----KREQRPQD 185
            GL K ++KISF+TVQ LM VK DL+ +V RNQAK +A EAYES+L G     + + +  D
Sbjct: 136  GLRKRFIKISFNTVQDLMQVKSDLMPIVARNQAKLEAVEAYESVLYGLSTEKQNKSKVYD 195

Query: 186  FLDCIVDLREYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLLEKRVDLLQRAEVHVCAFD 245
            + +CIVD+RE+DVPYH+RFAIDNDVRCG+WY V++ +    LEKR DLLQRAE  VCAFD
Sbjct: 196  YNECIVDIREFDVPYHVRFAIDNDVRCGEWYVVTVDAARTKLEKRPDLLQRAEARVCAFD 255

Query: 246  IETTKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVT 305
            IE TKLPLKFPDA YD +MMISYM+D QGYLIINRECV EDI+D+EYTPKPEFEG+FKV 
Sbjct: 256  IEATKLPLKFPDASYDSVMMISYMVDSQGYLIINRECVSEDIDDIEYTPKPEFEGHFKVR 315

Query: 306  NVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDKNQ 365
            N  +E ELL  WF HM+E+KP I+VTYNGD+FDWPF+E RA HHG  M ++LGF CD  Q
Sbjct: 316  NAASEKELLEWWFDHMREIKPNIFVTYNGDFFDWPFIEERAKHHGLSMRDKLGFSCDSAQ 375

Query: 366  GECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQM 425
            GEC +KFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFA E+PQ 
Sbjct: 376  GECLSKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFASEQPQK 435

Query: 426  MASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANV 485
            MA+YSVSDAVATYYLYMTYV+PFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQA+K N+
Sbjct: 436  MAAYSVSDAVATYYLYMTYVNPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAFKGNI 495

Query: 486  ICPNKHQSDPEKFYRNHLLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQLLNNLD 545
            ICPNKH+S+PE+FY   LL+SETYIGGHVECLESGVFRSDLPT F+L P AY++L++NLD
Sbjct: 496  ICPNKHKSEPERFYSGRLLDSETYIGGHVECLESGVFRSDLPTRFRLVPEAYQKLVDNLD 555

Query: 546  RDLQYAIKVEGKMDLESVSNYDEVKNAIMEKLLRLQEEPIREECPLIYHLDVAAMYPNII 605
            RDL YAI+ EGKM+ + V+NYDE++N        L++ P REE P+IYHLDVAAMYPNII
Sbjct: 556  RDLLYAIEKEGKMNAQEVTNYDELEN--------LRDVPNREEQPVIYHLDVAAMYPNII 607

Query: 606  LTNRLQPPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYYHLKKQIESEFV 665
            LTNRLQPPSIVTDE C ACDFNR  KTCLR ++WVWRGE FM KRS+YYHLK QIESE  
Sbjct: 608  LTNRLQPPSIVTDETCAACDFNRAEKTCLRPMQWVWRGESFMTKRSEYYHLKNQIESEMF 667

Query: 666  DGTNGHLSKSFLDLPKMEQQSRLKDRLKKYCQKAYKRVLDKPVTELREAGICMRENSFYV 725
                G  S+ F DL K EQQS+L+DRLKKYCQK YKRVLDKP TE R AG+CMRENSFYV
Sbjct: 668  TAGEGKPSQYFRDLSKDEQQSKLRDRLKKYCQKVYKRVLDKPTTEQRVAGVCMRENSFYV 727

Query: 726  DTVRSFRDRRYEYKGLNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHKCILNSF 785
            DTVRSFRDRRYEYK LNK                      DMVVLYDSLQLAHKCILNSF
Sbjct: 728  DTVRSFRDRRYEYKTLNK----------------------DMVVLYDSLQLAHKCILNSF 765

Query: 786  YGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLPGSFPEN 845
            YGYVMRKGARWYSMEMAG+VTYTGAKIIQNAR+L+E+IGKPLELDTDGIWC LP SFPEN
Sbjct: 766  YGYVMRKGARWYSMEMAGIVTYTGAKIIQNARILVEQIGKPLELDTDGIWCALPASFPEN 825

Query: 846  FTFKTKD--LKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEFEVD 903
            F F+T      KKL ISYPCVMLNVDVA NNTN QYQTL D   +TY T SECSIEFEVD
Sbjct: 826  FVFRTNSPIRDKKLPISYPCVMLNVDVALNNTNHQYQTLADATERTYRTSSECSIEFEVD 885

Query: 904  GPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFL 963
            GPYKAMILPASKEEG+LIKKRYAVFNDDGTLAELKGFE+KRRGELKLIKVFQAE+F+KFL
Sbjct: 886  GPYKAMILPASKEEGVLIKKRYAVFNDDGTLAELKGFEVKRRGELKLIKVFQAEVFEKFL 945

Query: 964  HGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLADYGEQKSCAV 1023
             GST+EECY AVAAVA+RWLD+L+NQG D+ADSEL+DYISESSTMSKSLADYG++KSCA 
Sbjct: 946  QGSTLEECYDAVAAVADRWLDMLENQGADVADSELLDYISESSTMSKSLADYGDKKSCAT 1005

Query: 1024 TTARRLSDFLGDTMVKDKGLRCQYIVACEPQGTPVSERAVPVAIFETDAEIMKFYLRKWC 1083
            TTA+RL+DFLG+ MVKDKGL C+YIVA +PQG+PVSERAVPVAIFET+AE+M+ YLRKWC
Sbjct: 1006 TTAKRLADFLGEAMVKDKGLSCRYIVARDPQGSPVSERAVPVAIFETEAEVMRAYLRKWC 1065

Query: 1084 KTSSDVGIRSIVDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLYKKVREKED 1143
            K S+D   RSIVDWSYY+QRL+S IQKIITIPAAMQKV+NPVPRV HPDWL+K+VREK+D
Sbjct: 1066 KVSADADFRSIVDWSYYRQRLASTIQKIITIPAAMQKVANPVPRVSHPDWLWKRVREKDD 1125

Query: 1144 KFRQRKLVDIFSSLKKDDFLNKTCNAETNLMDENVEDLEDFPKKRRNSVNGPRPIVRCFE 1203
            K+RQ+ + D F  +   D  N+            V DLED        + G +       
Sbjct: 1126 KYRQKSIFDAFKPITNADVDNEAL----------VGDLED--------ICGGKETCSSKG 1167

Query: 1204 VNNEQKTVKTTDQVDSLRQQLEPSEVSDQQPSSQNAIDTENIDRIVDYKGWLELKKRKWK 1263
            +N E +T  T +         EP   SD                  DY  WL+ +KRKWK
Sbjct: 1168 LNAEVETAATANT--------EPLCTSDGD----------------DYGAWLDKRKRKWK 1203

Query: 1264 DNLDRRKKQKLGSLRASHQANGVSESLGDMINHKEAQRRTGVGSYFRRQETAMTRCHWQI 1323
            D  ++RK+ + G     H  N ++ S          ++   V ++F+ +E ++TR HW++
Sbjct: 1204 DVREKRKRLRQGP-EPRHTDNRLNRS----------KKGNSVNTFFQNREASLTRSHWEV 1252

Query: 1324 IQLVPSSQSGVFLAWVVVEGIMVRIPITVPRLFYLNSKDPIVEKFPGRRVNKTLPHGRRS 1383
            +Q   + + G F+AWVV    M ++P+ V R+FYLN++  + E +PG+RV++ LPHG+  
Sbjct: 1253 LQFEATEKPGNFIAWVVAGSSMYKVPVKVSRIFYLNTRAIVSEDYPGKRVSRVLPHGKAC 1312

Query: 1384 FNLIEVMIDEDQFRKESKKLAALLADPEVE 1413
            FNLIEV++DE+Q+++  K + A L+DPEVE
Sbjct: 1313 FNLIEVILDEEQYKQAKKDVVAHLSDPEVE 1342



 Score =  679 bits (1751), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 351/651 (53%), Positives = 434/651 (66%), Gaps = 59/651 (9%)

Query: 1370 GRRVNKTLPHGRRSFNLIEVMIDE-DQFRKESKKLAALLADPEVEV-----------LGW 1417
            GRR+ +TL      F    V I E          + A+L  P V+V           LGW
Sbjct: 1482 GRRLQRTLHDYLDQFRRPAVAIVECPSMENIVAHVPAILEVPRVQVPWNSRHSDYKLLGW 1541

Query: 1418 QQNAAKIGMQRCAASSQWFNERISLARYAHI----------------------------L 1449
            Q  AAK+ MQRCAAS  W +ERI+L RYAH+                            L
Sbjct: 1542 QPVAAKLAMQRCAASPSWLSERIALCRYAHVPLGNLDSDWILFTADAFYARVLKDNQHVL 1601

Query: 1450 WISDDGVPDLGGTSEEDECFADEVHQPVLTYPGAYRKVSVELKIHHLSVNALLKSNQVNE 1509
            WISDDG+PDLGG  +++  F D V QP L YPGAYR V++ELKI+HL+VNALLKS QVNE
Sbjct: 1602 WISDDGLPDLGGVPQDEPSFTDVVQQPSLCYPGAYRSVTIELKINHLAVNALLKSTQVNE 1661

Query: 1510 MEGGGLFGFDQDMNSGPYNNELCGFDETTSSAPAFRVVKQLIQRCLTDAVTSGNVFADAI 1569
            +EGG L GF+ D            +DET S APAF ++KQ++ R LT            +
Sbjct: 1662 LEGGALLGFELDATGSNLRQVGGSWDETNSCAPAFGLLKQMVLRPLT------------V 1709

Query: 1570 LQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEFRKLGATIIFANFSKVIIDTGK 1629
            L  +    CSP SKLHDP LHR+LHKVMQKV+A+LLAE RKLGATI++ +FS++II TGK
Sbjct: 1710 LMLILTLCCSPLSKLHDPSLHRLLHKVMQKVYALLLAELRKLGATIVYGSFSRIIIGTGK 1769

Query: 1630 FDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLFMDQYNYGGIPARADESLDDDS 1689
             ++ AAK YCD LLK LQTRE+FEWIELEP  +WHS+LFMDQYNYG I A+   S D+  
Sbjct: 1770 HNVEAAKNYCDHLLKTLQTREMFEWIELEPQRYWHSILFMDQYNYGAIQAKVS-SEDNSE 1828

Query: 1690 QVDIVSSWNIAEYLPKEIQDHFVLVVSEFMYIPWKHAQKLAASRASLQEGSSCTPSITVA 1749
            + +IVSSWNIAEYLPK IQ+ F++VVSEF+Y+PWKHAQ+  A+R+      S TPS+TVA
Sbjct: 1829 EFEIVSSWNIAEYLPKAIQEFFIVVVSEFIYLPWKHAQETIAARSF---SFSSTPSVTVA 1885

Query: 1750 AAENFESHIVQYVKGEISSYFTGKLLSIVRDAIHHMKKMNN-DQHNSPGVMQTAANIHKV 1808
            AA + ++    ++K +I SYFT KLL IVRD   H     + D    P +    +++   
Sbjct: 1886 AAADADALETSFLKEQIESYFTDKLLRIVRDIQRHFTASRDVDDFKFPNL--AGSHLALG 1943

Query: 1809 DAPLEFIKHVCAAFALDQNVQHDVLVMRKNLLKYVRVREFAPEAEFRDPCPSFILPNVIC 1868
            DA LEFIK++ AA +LD  VQH V VMRKNLL+ V VREFAPEA+F DPC SF LPNVIC
Sbjct: 1944 DAALEFIKYIYAAMSLDHRVQHSVQVMRKNLLRLVHVREFAPEAQFHDPCLSFTLPNVIC 2003

Query: 1869 SYCNDCRDLDLCRDMALLAQDWHCAMPQCGQPYDREVMENALLQIVRQRERLYHLQDLVC 1928
            SYCNDCRDLDLCRD ALL +DWHC +PQCGQ Y+ + +ENALLQIVRQRERLYHLQDL C
Sbjct: 2004 SYCNDCRDLDLCRDAALLQKDWHCTVPQCGQMYNVQWIENALLQIVRQRERLYHLQDLKC 2063

Query: 1929 IRCNQVKAAHLAEQCACAGSFRCKEDASDFRSKMQIFLNIANRQGFQLLQE 1979
            ++C Q+KAAH+ EQC+C GSF C E +++F SK  +FLNIA   GF LL+E
Sbjct: 2064 VKCRQIKAAHITEQCSCGGSFECVEKSAEFMSKSHVFLNIATYYGFDLLKE 2114


>gi|218190829|gb|EEC73256.1| hypothetical protein OsI_07377 [Oryza sativa Indica Group]
          Length = 2081

 Score = 1790 bits (4635), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 849/1009 (84%), Positives = 933/1009 (92%), Gaps = 2/1009 (0%)

Query: 51   SSSLEDEDTRKVYSCIDLYFVSQDGSTFKSKYKFRPYFYAATKEKMEMDVEAYLRRRYES 110
            +SS EDEDT K+YSC+DLYFVSQDGSTFK KYKF PYFYAATK+KME++VEAYLRRRYE 
Sbjct: 11   NSSWEDEDTGKIYSCVDLYFVSQDGSTFKVKYKFPPYFYAATKDKMELEVEAYLRRRYEG 70

Query: 111  QIADIEILEKEDLDLKNHLSGLHKSYLKISFDTVQQLMDVKKDLLHVVERNQAKFDAAEA 170
             IADIEI+EKEDLDLKNHLSGL + YLKI FDTVQQLM V+ DLLHVVE+N+ + +AAEA
Sbjct: 71   DIADIEIIEKEDLDLKNHLSGLKRKYLKIQFDTVQQLMRVRSDLLHVVEKNEEELNAAEA 130

Query: 171  YESILTGKREQRPQDFLDCIVDLREYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLLEKR 230
            +ESI   KR +RPQD+++CI+DLREYDVPYH+RFAIDNDVRCGQWYDVS+SS+  LL +R
Sbjct: 131  FESIYGVKRVERPQDYINCIIDLREYDVPYHVRFAIDNDVRCGQWYDVSVSSSDVLLHRR 190

Query: 231  VDLLQRAEVHVCAFDIETTKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDL 290
             DLLQRAEVHVCAFDIETTKLPLKFPDA+YD +MMISYM+DGQGYLIINRECVGEDIEDL
Sbjct: 191  EDLLQRAEVHVCAFDIETTKLPLKFPDAEYDTVMMISYMIDGQGYLIINRECVGEDIEDL 250

Query: 291  EYTPKPEFEGYFKVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHG 350
            EYTPKPEFEG+FKV NV NE++LL+ WF+HMQEVKPGIYVTYNGD+FDWPFLE RAAHHG
Sbjct: 251  EYTPKPEFEGHFKVKNVANELDLLKAWFSHMQEVKPGIYVTYNGDFFDWPFLEKRAAHHG 310

Query: 351  FKMSEELGFQCDKNQGECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEV 410
             KM+EE+GFQCD NQGECRAKF+CHLDCFAWVKRDSYLPQGS GLKAVTKAKLGYDPLEV
Sbjct: 311  IKMNEEIGFQCDNNQGECRAKFSCHLDCFAWVKRDSYLPQGSHGLKAVTKAKLGYDPLEV 370

Query: 411  NPEDMVRFAKEKPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGT 470
            NPEDMVRFA E+PQ MASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGT
Sbjct: 371  NPEDMVRFAMEQPQTMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGT 430

Query: 471  LCEMLLMVQAYKANVICPNKHQSDPEKFYRNHLLESETYIGGHVECLESGVFRSDLPTSF 530
            LCEMLLMVQA+KAN+ICPNKHQ+D EKFY N LLESETYIGGHVECLE+GVFRSDLPT F
Sbjct: 431  LCEMLLMVQAFKANIICPNKHQADLEKFYNNRLLESETYIGGHVECLETGVFRSDLPTKF 490

Query: 531  KLDPSAYEQLLNNLDRDLQYAIKVEGKMDLESVSNYDEVKNAIMEKLLRLQEEPIREECP 590
            +L+PSA EQL+ NLDRDLQYAI VEGK+D++SV+NYDEVK+AI +KL+ L++ PIREECP
Sbjct: 491  QLEPSACEQLIANLDRDLQYAISVEGKLDIDSVTNYDEVKDAIKQKLVSLRDHPIREECP 550

Query: 591  LIYHLDVAAMYPNIILTNRLQPPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEIFMGKR 650
            LIYHLDVAAMYPNIILTNRLQPPSIVTD  CTACDFNRPGK CLR LEWVWRGE +M K+
Sbjct: 551  LIYHLDVAAMYPNIILTNRLQPPSIVTDVDCTACDFNRPGKNCLRTLEWVWRGETYMAKK 610

Query: 651  SDYYHLKKQIESEFVDGTNGHLSKSFLDLPKMEQQSRLKDRLKKYCQKAYKRVLDKPVTE 710
            SDY+H+K+QIESE +       SK FLDL K E   +LKDRLKKYCQKAYKRV+DKP+TE
Sbjct: 611  SDYHHIKRQIESEMIQAGGVTPSKPFLDLSKPEHLLKLKDRLKKYCQKAYKRVVDKPITE 670

Query: 711  LREAGICMRENSFYVDTVRSFRDRRYEYKGLNKVWKGKLSEAKASGNSIKIQEAQDMVVL 770
            +R AGICMRENSFYVDTVRSFRDRRYEYKGLNK WKGKL+EAKA+GNSIKIQEAQDMVVL
Sbjct: 671  VRNAGICMRENSFYVDTVRSFRDRRYEYKGLNKSWKGKLAEAKANGNSIKIQEAQDMVVL 730

Query: 771  YDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELD 830
            YDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLL++KIGKPLELD
Sbjct: 731  YDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLVDKIGKPLELD 790

Query: 831  TDGIWCVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTY 890
            TDGIWCVLPGSFPENFTFKT +  KKLTISYPCVMLNVDVARNNTNDQYQTL DPV+K Y
Sbjct: 791  TDGIWCVLPGSFPENFTFKT-NAGKKLTISYPCVMLNVDVARNNTNDQYQTLNDPVNKLY 849

Query: 891  ETHSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKL 950
             THSECSIEFEVDGPYKAMILPASKEEG+L+KKRYAVFN+DGTLAELKGFEIKRRGELKL
Sbjct: 850  TTHSECSIEFEVDGPYKAMILPASKEEGVLLKKRYAVFNEDGTLAELKGFEIKRRGELKL 909

Query: 951  IKVFQAELFDKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSK 1010
            IKVFQAE+FD+FLHGST+EECY+AVA+VANRWLDLLDNQG DI+D+EL+D+ISESSTMSK
Sbjct: 910  IKVFQAEVFDRFLHGSTLEECYTAVASVANRWLDLLDNQGIDISDNELLDFISESSTMSK 969

Query: 1011 SLADYGEQKSCAVTTARRLSDFLGDTMVKDKGLRCQYIVACEPQ-GTPV 1058
            SL DYGEQKSCAVTTA+RL++FLGD+MVKDKGL CQYIVA EPQ   PV
Sbjct: 970  SLVDYGEQKSCAVTTAKRLAEFLGDSMVKDKGLHCQYIVAREPQISNPV 1018



 Score =  855 bits (2210), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 398/613 (64%), Positives = 478/613 (77%), Gaps = 34/613 (5%)

Query: 1409 DPEVEVLGWQQNAAKIGMQRCAASSQWFNERISLARYAHI-------------------- 1448
            D   + LGWQ  A +  MQRCAAS+QWF+ERISLARYAH+                    
Sbjct: 1470 DNNYQALGWQATAGRTSMQRCAASTQWFSERISLARYAHVPLGNFELDWLLFTADVFFSR 1529

Query: 1449 --------LWISDDGVPDLGGTSEEDECFADEVHQPVLTYPGAYRKVSVELKIHHLSVNA 1500
                    LWISDDG+PDLGGT E D CFADEV QP LTYPGAYR+V+VELKIHHL+VN+
Sbjct: 1530 ALRDQQQVLWISDDGIPDLGGTYEGDTCFADEVIQPALTYPGAYRRVAVELKIHHLAVNS 1589

Query: 1501 LLKSNQVNEMEGGGLFGFDQDMNSGPYNNELCGFDETTSSAPAFRVVKQLIQRCLTDAVT 1560
            LLKS+QV+EMEGG +  F  DM +GP   E   FD+ T   PAF+V+KQLIQRC++DAV+
Sbjct: 1590 LLKSSQVDEMEGGPIGSFANDMPAGPNGTE-TEFDDATLCLPAFQVLKQLIQRCISDAVS 1648

Query: 1561 SGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEFRKLGATIIFANF 1620
            SGNVFADAILQHLYRWLCSP SKLHDP LHR+LH VM+KVFA++LAEFRKLGA +IFANF
Sbjct: 1649 SGNVFADAILQHLYRWLCSPRSKLHDPALHRLLHNVMKKVFALMLAEFRKLGANVIFANF 1708

Query: 1621 SKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLFMDQYNYGGIPAR 1680
            SK+IIDTGK DLS+A+AYCDSLLK LQTR++FEW+ELEP+H+WHSLLFMDQYNYGGI A+
Sbjct: 1709 SKIIIDTGKVDLSSARAYCDSLLKTLQTRDIFEWVELEPLHYWHSLLFMDQYNYGGIQAK 1768

Query: 1681 -----ADESLDDDSQVDIVSSWNIAEYLPKEIQDHFVLVVSEFMYIPWKHAQKLAASRAS 1735
                 ++ S D D+ +DIVSSWNIAEYLPK  QDHFVL+VSEF+Y+PWK+ ++  A R++
Sbjct: 1769 MQNATSEGSSDGDNDIDIVSSWNIAEYLPKATQDHFVLIVSEFLYVPWKYMKEQVALRST 1828

Query: 1736 LQEGSSCTPSITVAAAENFESHIVQYVKGEISSYFTGKLLSIVRDAIHHMKKMNNDQHNS 1795
             ++ +SCTPSIT+ AAEN E  ++ Y++ +IS+YF  KLL IV D +HH K     +   
Sbjct: 1829 TRDETSCTPSITIMAAENLEVQVIGYIRDQISNYFADKLLRIVSDILHHFKGKGKSESVE 1888

Query: 1796 PGVMQTAANIHKVDAPLEFIKHVCAAFALDQNVQHDVLVMRKNLLKYVRVREFAPEAEFR 1855
                +   + HK DA LEFIKH+CA  ALDQNVQHD+L MRKNLLK VRV+EFAPEA+F+
Sbjct: 1889 LTNREPDPHTHKGDAALEFIKHICAVLALDQNVQHDILRMRKNLLKLVRVKEFAPEAQFQ 1948

Query: 1856 DPCPSFILPNVICSYCNDCRDLDLCRDMALLAQDWHCAMPQCGQPYDREVMENALLQIVR 1915
            DPC SF LPNVICSYCNDCRDLDLCRD  L  Q+W CA+PQCGQPY RE MENALLQ+VR
Sbjct: 1949 DPCASFTLPNVICSYCNDCRDLDLCRDSTLQGQEWRCAVPQCGQPYHREQMENALLQVVR 2008

Query: 1916 QRERLYHLQDLVCIRCNQVKAAHLAEQCACAGSFRCKEDASDFRSKMQIFLNIANRQGFQ 1975
            QRERLYHLQDLVC+RC QVKAAHL+EQC+C G+FRCKE++S F SKM++FLN+A  Q F+
Sbjct: 2009 QRERLYHLQDLVCLRCRQVKAAHLSEQCSCGGAFRCKEESSQFLSKMRVFLNVAVSQKFE 2068

Query: 1976 LLQECTSWILEVQ 1988
            LLQ+   WILEV+
Sbjct: 2069 LLQDVVQWILEVR 2081



 Score =  219 bits (557), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 133/308 (43%), Positives = 176/308 (57%), Gaps = 35/308 (11%)

Query: 1114 IPAAMQKVSNPVPRVVHPDWLYKKVREKEDKFRQRKLVDIFSSLKKDDFLNKTCNAETNL 1173
            I A   ++SNPVPRV+HPD L+KKVREK+D+FRQRKL D+F+ L+KD           NL
Sbjct: 1007 IVAREPQISNPVPRVLHPDGLHKKVREKDDRFRQRKLRDMFNPLEKD-------RGVQNL 1059

Query: 1174 MDENVEDLEDF-----PKKRRNSVNGPRPIVRCFEVNNEQKTVKTTDQVDSLRQQLEPSE 1228
              +   D+ED        ++ +  NG       F   N+     +T+      +  + S 
Sbjct: 1060 --DGTGDMEDLLTLDGGMRKSHVPNG-------FGKENKPNDAPSTEAGSKHSKNKQKSI 1110

Query: 1229 VSDQQPSS---QNAIDTENIDRIVDYKGWLELKKRKWKDNLDRRKKQKLGSLRASHQANG 1285
                +P +   QN    E +DR  DY+GWL+ KKRKWK   +++K+Q+LG   A+  ++G
Sbjct: 1111 TRLNEPLAVHIQNDAADEQVDRSTDYQGWLDAKKRKWKYVREQKKRQRLG---AAVTSDG 1167

Query: 1286 VSESLGDMINHKEAQRRTGVGSYFRRQETAMTRCHWQIIQLVPSSQSGVFLAWVVVEGIM 1345
             +  L           R  V   F      +  C  QIIQL  S+  G F AWVV EGIM
Sbjct: 1168 PTNDL--------FSARNVVIYSFTLMPDKLIYCPHQIIQLASSTLPGHFFAWVVAEGIM 1219

Query: 1346 VRIPITVPRLFYLNSKDPIVEKFPGRRVNKTLPHGRRSFNLIEVMIDEDQFRKESKKLAA 1405
             +IPI VPR+FYLNSK P+ E+FPGRRV K LPHGR  FNLIEV+  E+QFR E KKLAA
Sbjct: 1220 FKIPINVPRVFYLNSKAPVTEEFPGRRVKKILPHGRPCFNLIEVVTSEEQFRVEGKKLAA 1279

Query: 1406 LLADPEVE 1413
             LA+P+VE
Sbjct: 1280 HLAEPDVE 1287


>gi|222622932|gb|EEE57064.1| hypothetical protein OsJ_06880 [Oryza sativa Japonica Group]
          Length = 2127

 Score = 1781 bits (4614), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 852/1046 (81%), Positives = 944/1046 (90%), Gaps = 18/1046 (1%)

Query: 14   TKKQKLIRSAEEELEAKLGYDLFSEGDKRLGWLLTFASSSLEDEDTRKVYSCIDLYFVSQ 73
             K Q+L   AEE LE++LG+  +++ ++RLGWLLTF+ SS EDEDT K+YSC+DLYFVSQ
Sbjct: 36   AKDQRLRLGAEELLESRLGFAPYTDSERRLGWLLTFSPSSWEDEDTGKIYSCVDLYFVSQ 95

Query: 74   DGSTFKSKYKFRPYFYAATKEKMEMDVEAYLRRRYESQIADIEILEKEDLDLKNHLSGLH 133
            DGSTFK KYKF PYFYAATK+KME++VEAYLRRRYE  IADIEI+EKEDLDLKNHLSGL 
Sbjct: 96   DGSTFKVKYKFPPYFYAATKDKMELEVEAYLRRRYEGDIADIEIIEKEDLDLKNHLSGLK 155

Query: 134  KSYLKISFDTVQQLMDVKKDLLHVVERNQAKFDAAEAYESILTGKREQRPQDFLDCIVDL 193
            + YLKI FDTVQQLM V+ DLLHVVE+N+ + +AAEA+ESI   KR +RPQD+++CI+DL
Sbjct: 156  RKYLKIQFDTVQQLMRVRSDLLHVVEKNEEELNAAEAFESIYGVKRVERPQDYINCIIDL 215

Query: 194  REYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLLEKRVDLLQRAEVHVCAFDIETTKLPL 253
            REYDVPYH+RFAIDNDVRCGQWYDVS+SS+  LL +R DLLQRAEVHVCAFDIETTKLPL
Sbjct: 216  REYDVPYHVRFAIDNDVRCGQWYDVSVSSSDVLLHRREDLLQRAEVHVCAFDIETTKLPL 275

Query: 254  KFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNVNNEIEL 313
            KFPDA+YD +MMISYM+DGQGYLIINRECVGEDIEDLEYTPKPEFEG+FKV NV NE++L
Sbjct: 276  KFPDAEYDTVMMISYMIDGQGYLIINRECVGEDIEDLEYTPKPEFEGHFKVKNVANELDL 335

Query: 314  LRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDKNQGECRAKFA 373
            L+ WF+HMQEVKPGIYVTYNGD+FDWPFLE RAAHHG KM+EE+GFQCD NQGECRAKF+
Sbjct: 336  LKAWFSHMQEVKPGIYVTYNGDFFDWPFLEKRAAHHGIKMNEEIGFQCDNNQGECRAKFS 395

Query: 374  CHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQMMASYSVSD 433
            CHLDCFAWVKRDSYLPQGS GLKAVTKAKLGYDPLEVNPEDMVRFA E+PQ MASYSVSD
Sbjct: 396  CHLDCFAWVKRDSYLPQGSHGLKAVTKAKLGYDPLEVNPEDMVRFAMEQPQTMASYSVSD 455

Query: 434  AVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVICPNKHQS 493
            AVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQA+KAN+ICPNKHQ+
Sbjct: 456  AVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAFKANIICPNKHQA 515

Query: 494  DPEKFYRNHLLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQLLNNLDRDLQYAIK 553
            D EKFY N LLESETYIGGHVECLE+GVFRSDLPT F+L+PSA EQL+ NLDRDLQYAI 
Sbjct: 516  DLEKFYNNRLLESETYIGGHVECLETGVFRSDLPTKFQLEPSACEQLIANLDRDLQYAIS 575

Query: 554  VEGKMDLESVSNYDEVKNAIMEKLLRLQEEPIREECPLIYHLDVAAMYPNIILTNRLQPP 613
            VEGK+D++SV+NYDEVK+AI +KL+ L++ PIREECPLIYHLDVAAMYPNIILTNRLQPP
Sbjct: 576  VEGKLDIDSVTNYDEVKDAIKQKLVSLRDHPIREECPLIYHLDVAAMYPNIILTNRLQPP 635

Query: 614  SIVTDEVCTACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYYHLKKQIESEFVDGTNGHLS 673
            SIVTD  CTACDFNRPGK CLR LEWVWRGE +M K+SDY+H+K+QIESE +       S
Sbjct: 636  SIVTDVDCTACDFNRPGKNCLRTLEWVWRGETYMAKKSDYHHIKRQIESEMIQAGGVTPS 695

Query: 674  KSFLDLPKMEQQSRLKDRLKKYCQKAYKRVLDKPVTELREAGICMRENSFYVDTVRSFRD 733
            K FLDL K E   +LKDRLKKYCQKAYKRV+DKP+TE+R AGICMRENSFYVDTVRSFRD
Sbjct: 696  KPFLDLSKPEHLLKLKDRLKKYCQKAYKRVVDKPITEVRNAGICMRENSFYVDTVRSFRD 755

Query: 734  RRYEYKGLNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHKCILNSFYGYVMRKG 793
            RRYEYKGLNK WKGKL+EAKA+GNSIKIQEAQDMVVLYDSLQLAHKCILNSFYGYVMRKG
Sbjct: 756  RRYEYKGLNKSWKGKLAEAKANGNSIKIQEAQDMVVLYDSLQLAHKCILNSFYGYVMRKG 815

Query: 794  ARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLPGSFPENFTFKTKDL 853
            ARWYSMEMAGVVTYTGAKIIQNARLL++KIGKPLELDTDGI C                 
Sbjct: 816  ARWYSMEMAGVVTYTGAKIIQNARLLVDKIGKPLELDTDGI-CA---------------- 858

Query: 854  KKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEFEVDGPYKAMILPA 913
             KKLTISYPCVMLNVDVARNNTNDQYQTL DPV+K Y THSECSIEFEVDGPYKAMILPA
Sbjct: 859  GKKLTISYPCVMLNVDVARNNTNDQYQTLNDPVNKLYTTHSECSIEFEVDGPYKAMILPA 918

Query: 914  SKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFLHGSTIEECYS 973
            SKEEG+L+KKRYAVFN+DGTLAELKGFEIKRRGELKLIKVFQAE+FD+FLHGST+EECY+
Sbjct: 919  SKEEGVLLKKRYAVFNEDGTLAELKGFEIKRRGELKLIKVFQAEVFDRFLHGSTLEECYT 978

Query: 974  AVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLADYGEQKSCAVTTARRLSDFL 1033
            AVA+VANRWLDLLDNQG DI+D+EL+D+ISESSTMSKSL DYGEQKSCAVTTA+RL++FL
Sbjct: 979  AVASVANRWLDLLDNQGIDISDNELLDFISESSTMSKSLVDYGEQKSCAVTTAKRLAEFL 1038

Query: 1034 GDTMVKDKGLRCQYIVACEPQ-GTPV 1058
            GD+MVKDKGL CQYIVA EPQ   PV
Sbjct: 1039 GDSMVKDKGLHCQYIVAREPQISNPV 1064



 Score =  852 bits (2200), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 397/613 (64%), Positives = 476/613 (77%), Gaps = 34/613 (5%)

Query: 1409 DPEVEVLGWQQNAAKIGMQRCAASSQWFNERISLARYAHI-------------------- 1448
            D   + LGWQ  A +  MQRCAAS+QWFNERISLARYAH+                    
Sbjct: 1516 DNNYQALGWQATAGRTSMQRCAASTQWFNERISLARYAHVPLGNFELDWLLFTADVFFSR 1575

Query: 1449 --------LWISDDGVPDLGGTSEEDECFADEVHQPVLTYPGAYRKVSVELKIHHLSVNA 1500
                    LWISDDG+PDLGGT E D CFADEV QP LTYPGAYR+V+VELKIHHL+VN+
Sbjct: 1576 ALRDQQQVLWISDDGIPDLGGTYEGDTCFADEVIQPALTYPGAYRRVAVELKIHHLAVNS 1635

Query: 1501 LLKSNQVNEMEGGGLFGFDQDMNSGPYNNELCGFDETTSSAPAFRVVKQLIQRCLTDAVT 1560
            LLKS+QV+EMEGG +  F  DM +GP   E   FD+ T   PAF+V+KQLIQRC++DAV+
Sbjct: 1636 LLKSSQVDEMEGGPIGSFANDMPAGPNGTE-TEFDDATLCLPAFQVLKQLIQRCISDAVS 1694

Query: 1561 SGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEFRKLGATIIFANF 1620
            SGNVFADAILQHLYRWLCSP SKLHDP LH +LH VM+KVFA++LAEFRKLGA +IFANF
Sbjct: 1695 SGNVFADAILQHLYRWLCSPRSKLHDPALHHLLHNVMKKVFALMLAEFRKLGANVIFANF 1754

Query: 1621 SKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLFMDQYNYGGIPAR 1680
            SK+IIDTGK DL +A+AYCDSLLK LQTR++FEW+ELEP+H+WHSLLFMDQYNYGGI A+
Sbjct: 1755 SKIIIDTGKVDLLSARAYCDSLLKTLQTRDIFEWVELEPLHYWHSLLFMDQYNYGGIQAK 1814

Query: 1681 -----ADESLDDDSQVDIVSSWNIAEYLPKEIQDHFVLVVSEFMYIPWKHAQKLAASRAS 1735
                 ++ S D D+ +DIVSSWNIAEYLPK  QDHFVL+VSEF+Y+PWK+ ++  A R++
Sbjct: 1815 MQNATSEGSSDGDNDIDIVSSWNIAEYLPKATQDHFVLIVSEFLYVPWKYMKEQVALRST 1874

Query: 1736 LQEGSSCTPSITVAAAENFESHIVQYVKGEISSYFTGKLLSIVRDAIHHMKKMNNDQHNS 1795
             ++ +SCTPSIT+ AAEN E  ++ Y++ +IS+YF  KLL IV D +HH K     +   
Sbjct: 1875 TRDETSCTPSITIMAAENLEVQVIGYLRDQISNYFADKLLRIVSDILHHFKGKGKSESVE 1934

Query: 1796 PGVMQTAANIHKVDAPLEFIKHVCAAFALDQNVQHDVLVMRKNLLKYVRVREFAPEAEFR 1855
                +   + HK DA LEFIKH+CA  ALDQNVQHD+L MRKNLLK VRV+EFAPEA+F+
Sbjct: 1935 LTNREPDPHTHKGDAALEFIKHICAVLALDQNVQHDILRMRKNLLKLVRVKEFAPEAQFQ 1994

Query: 1856 DPCPSFILPNVICSYCNDCRDLDLCRDMALLAQDWHCAMPQCGQPYDREVMENALLQIVR 1915
            DPC SF LPNVICSYCNDCRDLDLCRD  L  Q+W CA+PQCGQPY RE MENALLQ+VR
Sbjct: 1995 DPCASFTLPNVICSYCNDCRDLDLCRDSTLQGQEWRCAVPQCGQPYHREQMENALLQVVR 2054

Query: 1916 QRERLYHLQDLVCIRCNQVKAAHLAEQCACAGSFRCKEDASDFRSKMQIFLNIANRQGFQ 1975
            QRERLYHLQDLVC+RC QVKAAHL+EQC+C G+FRCKE++S F SKM++FLN+A  Q F+
Sbjct: 2055 QRERLYHLQDLVCLRCRQVKAAHLSEQCSCGGAFRCKEESSQFLSKMRVFLNVAVSQKFE 2114

Query: 1976 LLQECTSWILEVQ 1988
            LLQ+   WILEV+
Sbjct: 2115 LLQDVVQWILEVR 2127



 Score =  225 bits (573), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 134/308 (43%), Positives = 177/308 (57%), Gaps = 35/308 (11%)

Query: 1114 IPAAMQKVSNPVPRVVHPDWLYKKVREKEDKFRQRKLVDIFSSLKKDDFLNKTCNAETNL 1173
            I A   ++SNPVPRV+HPDWL+KKVREK+D+FRQRKL D+F+ L+KD           NL
Sbjct: 1053 IVAREPQISNPVPRVLHPDWLHKKVREKDDRFRQRKLRDMFNPLEKD-------RGVQNL 1105

Query: 1174 MDENVEDLEDF-----PKKRRNSVNGPRPIVRCFEVNNEQKTVKTTDQVDSLRQQLEPSE 1228
              +   D+ED        ++ +  NG       F   N+     +T+      +  + S 
Sbjct: 1106 --DGTGDMEDLLTLDGGMRKSHVPNG-------FGKENKPNDAPSTEAGSKHSKNKQKSI 1156

Query: 1229 VSDQQPSS---QNAIDTENIDRIVDYKGWLELKKRKWKDNLDRRKKQKLGSLRASHQANG 1285
                +P +   QN    E +DR  DY+GWL+ KKRKWK   +++K+Q+LG   A+  ++G
Sbjct: 1157 TRSNEPLAVHIQNDAADEQVDRSTDYQGWLDAKKRKWKYVREQKKRQRLG---AAVTSDG 1213

Query: 1286 VSESLGDMINHKEAQRRTGVGSYFRRQETAMTRCHWQIIQLVPSSQSGVFLAWVVVEGIM 1345
             +  L           R  V   F      +  C  QIIQL  S+  G F AWVV EGIM
Sbjct: 1214 PTNDL--------FSARNVVIYSFTLMPDKLIYCPHQIIQLASSTLPGHFFAWVVAEGIM 1265

Query: 1346 VRIPITVPRLFYLNSKDPIVEKFPGRRVNKTLPHGRRSFNLIEVMIDEDQFRKESKKLAA 1405
             +IPI VPR+FYLNSK P+ E+FPGRRV K LPHGR  FNLIEV+  E+QFR E KKLAA
Sbjct: 1266 FKIPINVPRVFYLNSKAPVTEEFPGRRVKKILPHGRPCFNLIEVVTSEEQFRVEGKKLAA 1325

Query: 1406 LLADPEVE 1413
             LA+P+VE
Sbjct: 1326 HLAEPDVE 1333


>gi|255086157|ref|XP_002509045.1| predicted protein [Micromonas sp. RCC299]
 gi|226524323|gb|ACO70303.1| predicted protein [Micromonas sp. RCC299]
          Length = 2478

 Score = 1638 bits (4241), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 814/1481 (54%), Positives = 1043/1481 (70%), Gaps = 84/1481 (5%)

Query: 13   RTKKQKLIRSAEEE-LEAKLGYDLFSEGDKRLGWLLTFASSSLEDEDTRKVYSCIDLYFV 71
            + +K +L  + EE+ LEA LG+  F+EGD+RLGWL+  +S+++++ +T K +S ++ YF+
Sbjct: 44   KNQKSRLQMAQEEDALEAGLGFVNFTEGDERLGWLVNVSSTTVQEAETGKEFSAVNCYFM 103

Query: 72   SQDGSTFKSKYKFRPYFYAATKEKMEMDVEAYLRRRYESQIADIEILEKEDLDLKNHLSG 131
             QDG TFK++ ++ PYF  ATK   E DVEA+LRRRYE +I D+ +L+KEDLDLKNHLSG
Sbjct: 104  QQDGDTFKAQVRYAPYFLIATKPNCEHDVEAFLRRRYEGKIHDVTVLDKEDLDLKNHLSG 163

Query: 132  LHKSYLKISFDTVQQLMDVKKDLLHVVERNQAKFDAAEAYESI----------------- 174
            L + YLK++F TVQ LMDV++++L +V++NQ++ +AAEAYE++                 
Sbjct: 164  LKQKYLKVTFATVQDLMDVRREVLPMVKKNQSRSEAAEAYEALHQMEASAVTHQGRAHHG 223

Query: 175  LTGKREQRPQ-------DFLDCIVDLREYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLL 227
            ++   EQ+         ++ D ++D+REYDVPYH+RF ID + RCG WY V +      +
Sbjct: 224  VSRGGEQKSTKGKRAIANYADAMMDIREYDVPYHMRFLIDTETRCGWWYQVKVKQGEVTM 283

Query: 228  EKRVDLLQRAEVHVCAFDIETTKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDI 287
              R D+L R EV +CAFDIETTKLPLKFPDA+YD + MISYMLDGQGYLIINRE V  DI
Sbjct: 284  THRKDMLARGEVKICAFDIETTKLPLKFPDAEYDQVFMISYMLDGQGYLIINREVVSADI 343

Query: 288  EDLEYTPKPEFEGYFKVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAA 347
            ED EY+PKPE+ G F V N  +E  LLR WF HM+EV+P +YVTYNGD+FDWPF+ETRA 
Sbjct: 344  EDFEYSPKPEYPGPFIVWNEPDEAALLRRWFDHMREVQPSVYVTYNGDFFDWPFVETRAE 403

Query: 348  HHGFKMSEELGFQCDKNQGECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDP 407
             +G  M  ELG +CD+  GECR++ A HLD FAWVKRDSYLP GS GLKAVTKAKLGY+P
Sbjct: 404  KNGMSMYLELGMRCDRKTGECRSRSALHLDAFAWVKRDSYLPAGSHGLKAVTKAKLGYNP 463

Query: 408  LEVNPEDMVRFAKEKPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKG 467
            +EV+PEDM+ FA+E+P  MA+YSVSDAV+TYYLYMTYVHPFIFSLATIIP+SPDEVLRKG
Sbjct: 464  VEVDPEDMLPFAQEQPHHMAAYSVSDAVSTYYLYMTYVHPFIFSLATIIPLSPDEVLRKG 523

Query: 468  SGTLCEMLLMVQAYKANVICPNKHQSDPEKFYRNHLLESETYIGGHVECLESGVFRSDLP 527
            SGTLCE LLMV+AY+AN++CPNK QS  EK Y+ HLLESETYIGGHVECLE+GVFR+D+P
Sbjct: 524  SGTLCEALLMVEAYRANIVCPNKTQSAGEKHYKGHLLESETYIGGHVECLEAGVFRADIP 583

Query: 528  TSFKLDPSAYEQLLNNLDRDLQYAIKVEG-KMDLESVSNYDEVKNAIMEKLLRLQEEPIR 586
            T F+++P  Y+ LL++LD DL+YA+  EG KM  E V NYDEV+ AI EKL+ L++ P++
Sbjct: 584  TKFRMNPKGYQGLLDSLDEDLKYALYHEGKKMTPEDVENYDEVRAAIAEKLVDLRDNPVQ 643

Query: 587  EECPLIYHLDVAAMYPNIILTNRLQPPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEIF 646
               PLIYHLDVAAMYPNIILTNRLQPP++VT++VC ACDFNRPGKTCLR++EW+WRGE +
Sbjct: 644  MAKPLIYHLDVAAMYPNIILTNRLQPPAMVTEDVCAACDFNRPGKTCLREMEWLWRGEHY 703

Query: 647  MGKRSDYYHLKKQIESE----FVDGTNGHLSKSFLDLPKMEQQSRLKDRLKKYCQKAYKR 702
                SDY  +K Q+E+E      DGT     + + DL   EQ +  K+RLK Y QK YKR
Sbjct: 704  AATSSDYAAIKAQLEAEKFPPKADGTGDGRPRYWADLSYEEQAAAKKNRLKMYSQKVYKR 763

Query: 703  VLDKPVTELREAGICMRENSFYVDTVRSFRDRRYEYKGLNKVWKGKLSEAKASGNSIKIQ 762
            VLDKP+TE + AGIC REN FYVDTV++FRDRRYEYKGLNK WKGKL +AK SGN I +Q
Sbjct: 764  VLDKPITESKMAGICQRENGFYVDTVKNFRDRRYEYKGLNKTWKGKLGDAKKSGNPIAVQ 823

Query: 763  EAQDMVVLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEK 822
            EA+DMV L+DSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQ A+ L++ 
Sbjct: 824  EAKDMVTLFDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQMAKRLVDD 883

Query: 823  IGKPLELDTDGIWCVLPGSFPENFTFKTKDL--KKKLTISYPCVMLNVDVARNNTNDQYQ 880
            IGKPLELDTDGIWC LPG+FPE FT K K+   KKKLTISYPC +LN   A   TNDQYQ
Sbjct: 884  IGKPLELDTDGIWCCLPGTFPEEFTLKPKEGVNKKKLTISYPCSVLNRLTALQCTNDQYQ 943

Query: 881  TLVDPVSKTYETHSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGF 940
            TL D   +TYE+ SE +IEFEVDGPYKAMILPASKEEGILIKKRYAVFN DG+L ELKGF
Sbjct: 944  TLTDKEKRTYESSSEMTIEFEVDGPYKAMILPASKEEGILIKKRYAVFNFDGSLEELKGF 1003

Query: 941  EIKRRGELKLIKVFQAELFDKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELID 1000
            E+KRRGELKLIK+FQ E+FD+FL G+T+EE Y AV  VAN+WLD+LD++G+D+ D +L+D
Sbjct: 1004 EVKRRGELKLIKMFQTEVFDEFLKGTTLEEVYEAVGKVANKWLDMLDSKGRDLTDEDLVD 1063

Query: 1001 YISESSTMSKSLADYGEQKSCAVTTARRLSDFLGDTMVKDKGLRCQYIVACEPQGTPVSE 1060
            YISE++TMSKSL +YG++KSCA TTA+RL  F+G  +  DKGL+ QYI+  +P G P S+
Sbjct: 1064 YISEATTMSKSLEEYGDRKSCATTTAKRLGAFIGGDIANDKGLKAQYIITKKPAGAPTSQ 1123

Query: 1061 RAVPVAIFETDAEIMKFYLRKWCKTSSD------VGIRSIVDWSYYKQRLSSAIQKIITI 1114
            RAVPV IF+ +  + + +LR W K S          +R ++DW YYK RL+SAIQKII+I
Sbjct: 1124 RAVPVTIFQAEPAVARSFLRDWTKDSPPGDADEVPDMRELLDWDYYKTRLASAIQKIISI 1183

Query: 1115 PAAMQKVSNPVPRVVHPDWLYKKVREKEDKFRQRKLVDIFSS--LKKDDFLNKTCNAETN 1172
            PAA+Q V NP PRV HPDWL+K VREK+DKF+QRKL D+F +   K++    K  NA  +
Sbjct: 1184 PAALQHVPNPCPRVTHPDWLHKMVREKDDKFKQRKLADLFGAHDAKRELLAAKDPNAPEH 1243

Query: 1173 LMDENVE--------DLED----FPKKRRNSVNGPR--PIVRCFEVNNEQKTVKTTDQVD 1218
                           D+ED     P       +GPR     R  E +     V TT +  
Sbjct: 1244 DAAHTPGKKARGDELDMEDAAGAAPGTLIGKTSGPRVQRFFRGVEDSAPGGGVPTTPETG 1303

Query: 1219 SLRQQLEPSEVSDQQPSS----------QNAIDTENI------------DRIVDYKGWLE 1256
            ++  +  P   S   P+           +NA+D   I            D+  D+ GWL 
Sbjct: 1304 AVAARTLPG--SGPSPADGGNVTGNVRRRNALDPVEIAREAFESLGACPDKRQDFDGWLR 1361

Query: 1257 LKKRKWKDNLDRRKKQKLGSLRASHQANGVSESLGDMINHKEAQRRTGVGSYFRRQETAM 1316
              K KW+     RK++++    A   A GV+   G  +         G+G++   +E  +
Sbjct: 1362 HHKAKWRLQRAERKRRRVQEADALAAAGGVTPGFGRSMTRPRTLGPGGLGAFVESRERTL 1421

Query: 1317 TRCHWQIIQLVPSSQS-GVFLAWVVVEGIMVRIPITVPRLFYLNSKDPIVEKFPG----R 1371
                WQ++Q+ P++   G F AWV+  G +  +PI V R   +  + P  E   G    +
Sbjct: 1422 ATSAWQLVQIEPAAAGPGHFTAWVLAAGTIHSVPIKVSRRLAVAMRSPDREGDLGLGGKK 1481

Query: 1372 RVNKTLPHGRRSFNLIEVMIDEDQFRKESKKLAALLADPEV 1412
            RV+  LP G ++ ++ EV ++E ++     ++  LLA+P V
Sbjct: 1482 RVSAILPRGAKAEHVYEVKMEESEY-ASGLEVMDLLANPNV 1521



 Score =  255 bits (651), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 142/368 (38%), Positives = 196/368 (53%), Gaps = 57/368 (15%)

Query: 1414 VLGWQQNAAKIGMQRCAASSQWFNERISLARYAHI------------------------- 1448
             +GWQ NAAK    R AA   W  ER++++RYAHI                         
Sbjct: 1759 AIGWQVNAAKTACTRLAAHGDWLAERVAISRYAHIPVGNLGQDWCLHTADTFFARALRDS 1818

Query: 1449 ---LWISDDGVPDLGGTSEEDECFA-DEVHQPV---LTYPGAYRKVSVELKIHHLSVNAL 1501
               LW    GVPDLGG S +      D+  Q     +  PGAYR V VELK HHL+V A+
Sbjct: 1819 SQLLWTGPGGVPDLGGGSGDGALSGLDDTLQTTRAEVNNPGAYRCVCVELKAHHLAVCAI 1878

Query: 1502 LKSNQVNEMEGGGLFGFDQDMNSGPYNNELCGFDETTSSAPAFRVVKQLIQRCLTDAVTS 1561
              ++ +N++E G L G++Q+      +N   G      +A AFR ++ L+   L DA   
Sbjct: 1879 ANAHLLNDLEQGALLGYEQNTVGSGKDNGDSGVRGGHEAAAAFRTLRTLVNNWLVDATER 1938

Query: 1562 GNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEFRKLGATIIFANFS 1621
             N +ADA+L  L RWL S  S L +P L  ++   M+KVF +LLAE +KLGAT++ A+  
Sbjct: 1939 RNPYADALLGQLRRWLLSAFSTLREPALRHLVELCMKKVFTLLLAEVKKLGATVVHADMQ 1998

Query: 1622 KVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLFMDQYNYGGIPARA 1681
             + I TGK  L++A A+ D L  +L+ RELF W+ELEP   WHSLLF   Y+YGG+ A A
Sbjct: 1999 TITIATGKHRLASAAAFVDGLRASLRRRELFSWLELEPSRQWHSLLFRGPYDYGGLLASA 2058

Query: 1682 ----------DESLDDDSQVDIVSS---------------WNIAEYLPKEIQDHFVLVVS 1716
                      D    DD ++D V++               WNIA +LP+ I++HF +VVS
Sbjct: 2059 LPGAKQWSGHDTLGPDDFELDPVATRAAGVAEAAEALDMHWNIASFLPESIREHFEVVVS 2118

Query: 1717 EFMYIPWK 1724
            EF++ PWK
Sbjct: 2119 EFIFRPWK 2126



 Score =  174 bits (440), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 85/232 (36%), Positives = 138/232 (59%), Gaps = 10/232 (4%)

Query: 1761 YVKGEISSYFTGKLLSIVRDAIHHMKKMNNDQHNSP-GVMQTAANIH-----KVDAPLEF 1814
            ++ G++  YF+ ++L +V + I+ +      +H  P     T    H     +    L F
Sbjct: 2230 WLAGQVGGYFSQRILRLVGE-INRVLGPGTARHLGPQHKFPTPPGAHLPKDLRGSPALAF 2288

Query: 1815 IKHVCAAFALDQNVQHDVLVMRKNLLKYVRVREFAPEAEFRDPCPSFILPNVICSYCNDC 1874
            +K +CAA +LD +V+  V ++RKN LK +RV E++P+AEFR+PC +F++ + +C+YC+ C
Sbjct: 2289 VKTLCAALSLDVSVEGPVSLLRKNALKLLRVPEYSPQAEFREPCVTFVMRDAVCNYCSAC 2348

Query: 1875 RDLDLCRDMALLAQ-DWHCAMPQCGQPYDREVMENALLQIVRQRERLYHLQDLVCIRCNQ 1933
             DLDLCRD  L+   +W CA   CG PYD + +E  L+  V +R R   LQDL C R  +
Sbjct: 2349 ADLDLCRDERLVEDANWDCA--SCGNPYDPQWIEGTLVAHVNERVRQAQLQDLRCTRDRR 2406

Query: 1934 VKAAHLAEQCACAGSFRCKEDASDFRSKMQIFLNIANRQGFQLLQECTSWIL 1985
            +K +HLA +CAC G + C EDAS     +++  +IA    F++L++   W++
Sbjct: 2407 IKVSHLAARCACGGMYGCVEDASATADDLRVMHDIARHHDFKVLRDVVEWVV 2458


>gi|303284857|ref|XP_003061719.1| predicted protein [Micromonas pusilla CCMP1545]
 gi|226457049|gb|EEH54349.1| predicted protein [Micromonas pusilla CCMP1545]
          Length = 2471

 Score = 1568 bits (4060), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 800/1504 (53%), Positives = 1024/1504 (68%), Gaps = 114/1504 (7%)

Query: 13   RTKKQKLIRSAEEE-LEAKLGYDLFSEGDKRLGWLLTFASSSLEDEDTRKVYSCIDLYFV 71
            +++K +L  + EE+ LEA LGY  F+EG++RLGWL+   +++++D +T+K +S +D YF+
Sbjct: 45   KSEKSRLQMAQEEDALEATLGYAAFTEGEQRLGWLMNVCATTIQDAETQKEFSAVDCYFM 104

Query: 72   SQDGSTFKSKYKFRPYFYAATKEKMEMDVEAYLRRRYESQIADIEILEKEDLDLKNHLSG 131
             QDG TFK++ ++ PYF  A K+  E DVEA+L RRYE ++A +E+++KEDLDLKNHLSG
Sbjct: 105  QQDGETFKAQVRYAPYFLVAAKDGCEHDVEAFLTRRYEGKVAQVELVQKEDLDLKNHLSG 164

Query: 132  LHKSYLKISFDTVQQLMDVKKDLLHVVERNQAKFDAAEAYESI----------LTGKREQ 181
            L ++Y+K+SF TVQ LMDV+++++ +V++NQ + +AAEAYE++            G R  
Sbjct: 165  LKQTYVKVSFATVQDLMDVRREVMPMVKKNQTRCEAAEAYEALHQMEVMNGADQGGGRAH 224

Query: 182  RP-------------------QDFLDCIVDLREYDVPYHIRFAIDNDVRCGQWYDVSISS 222
                                  ++ D ++D+REYDVPYH+R+ ID + RCG WYDV  ++
Sbjct: 225  HAGTELRGNKGGGKPGGKRAIANYGDAMIDIREYDVPYHMRWLIDTETRCGWWYDVKANA 284

Query: 223  TGPLLEKRVDLLQRAEVHVCAFDIETTKLPLKFPDADYDIIMMISYMLDGQGYLIINREC 282
                L  R DLL R EV VCAFDIETTKLPLKFPDA++D + MISYMLDGQGYLIINR+ 
Sbjct: 285  GDVTLTHRPDLLARGEVRVCAFDIETTKLPLKFPDAEFDQVFMISYMLDGQGYLIINRDV 344

Query: 283  VGEDIEDLEYTPKPEFEGYFKVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFL 342
            VG D+++ EY+PKPE+ G F V N  +E  LLR WF HM+E +P +YVTYNGD+FDWPF+
Sbjct: 345  VGADVDNFEYSPKPEYPGDFIVWNEKDEAGLLRRWFDHMRETRPCVYVTYNGDFFDWPFV 404

Query: 343  ETRAAHHGFKMSEELGFQCDKNQGECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAK 402
            ETRA  +G  M  ELGF+CD+  GECR++ A HLD FAWVKRDSYLP GS GLKAVTKAK
Sbjct: 405  ETRAEKNGMSMYLELGFKCDRKTGECRSRSALHLDAFAWVKRDSYLPAGSHGLKAVTKAK 464

Query: 403  LGYDPLEVNPEDMVRFAKEKPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDE 462
            LGY+P+EV+PEDM+ FA+E+PQ MA+YSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDE
Sbjct: 465  LGYNPVEVDPEDMLPFAQEQPQTMAAYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDE 524

Query: 463  VLRKGSGTLCEMLLMVQAYKANVICPNKHQSDPEKFYRNHLLESETYIGGHVECLESGVF 522
            VLRKGSGTLCE LLMVQAY+ N++CPNK Q+  EK Y+ HLLESETYIGGHVE LE+GVF
Sbjct: 525  VLRKGSGTLCEALLMVQAYRGNIVCPNKQQAAGEKHYKGHLLESETYIGGHVEALEAGVF 584

Query: 523  RSDLPTSFKLDPSAYEQLLNNLDRDLQYAIKVEGK-MDLESVSNYDEVKNAIMEKLLRLQ 581
            R+D+PT F++ P  Y+ LL++LD DL YA+K EGK M+ E V NYDEV+  I  KL  L+
Sbjct: 585  RADIPTKFRMQPKGYQGLLDSLDDDLVYALKTEGKGMEREDVGNYDEVRAQIAAKLESLR 644

Query: 582  EEPIREECPLIYHLDVAAMYPNIILTNRLQPPSIVTDEVCTACDFNRPGKTCLRKLEWVW 641
            + P++   PLIYHLDVAAMYPNIILTNRLQPP++VT++VC ACD+NRPGKTCLR++EW+W
Sbjct: 645  DNPVQMANPLIYHLDVAAMYPNIILTNRLQPPAMVTEDVCAACDYNRPGKTCLREMEWLW 704

Query: 642  RGEIFMGKRSDYYHLKKQIESE----FVDGTNGHLSKSFLDLPKMEQQSRLKDRLKKYCQ 697
            RGE +    SDY  +K Q+E+E      DG  G   + + DL   EQ +  K RLK Y Q
Sbjct: 705  RGEHYAATSSDYTAIKAQLEAEKFPPRADGFGGDGPRYWADLSHEEQAAAKKARLKSYSQ 764

Query: 698  KAYKRVLDKPVTELREAGICMRENSFYVDTVRSFRDRRYEYKGLNKVWKGKLSEAKASGN 757
            K YKRVLDKPVTE R  GIC REN FYVDTV +FRDRRYEYKGLNK WKGKL +AK  GN
Sbjct: 765  KVYKRVLDKPVTESRIGGICQRENGFYVDTVMNFRDRRYEYKGLNKKWKGKLGDAKKGGN 824

Query: 758  SIKIQEAQDMVVLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNAR 817
             I++Q+A+DMV LYDSLQLAHKCILNSFYGYVMR+GARWYSMEMAGVVTYTGAKIIQ A+
Sbjct: 825  PIEVQQAKDMVTLYDSLQLAHKCILNSFYGYVMRRGARWYSMEMAGVVTYTGAKIIQMAK 884

Query: 818  LLIEKIGKPLELDTDGIWCVLPGSFPENFTFKTKD--LKKKLTISYPCVMLNVDVARNNT 875
             L++ IGKPLELDTDGIWC LPGSFPE F    K+   KKKLTISYPC +LN   A   T
Sbjct: 885  RLVDDIGKPLELDTDGIWCCLPGSFPEEFDLVPKEGSGKKKLTISYPCSVLNRLTALQCT 944

Query: 876  NDQYQTLVDPVSKTYETHSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLA 935
            NDQYQTL+DP  +TY+  SE SIEFEVDGPYKAMILPASKEEG LIKKRYAVFN DG+L 
Sbjct: 945  NDQYQTLMDPEKRTYKQSSEMSIEFEVDGPYKAMILPASKEEGKLIKKRYAVFNFDGSLE 1004

Query: 936  ELKGFEIKRRGELKLIKVFQAELFDKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIAD 995
            ELKGFE+KRRGELKLIK FQ E+F+KFL G T+E  Y++V  VAN+WLD+L+ +G+ + D
Sbjct: 1005 ELKGFEVKRRGELKLIKAFQEEVFEKFLDGDTLEGVYASVGVVANKWLDMLETKGEHLTD 1064

Query: 996  SELIDYISESSTMSKSLADYGEQKSCAVTTARRLSDFLGDTMVKDKGLRCQYIVACEPQG 1055
             +L+DYISE++TMSKSL +YG++KSCA T ARRL  F+G  ++ DKGL+ QYI+  +P G
Sbjct: 1065 EDLVDYISEATTMSKSLEEYGDRKSCATTCARRLGAFIGGDVMTDKGLKAQYIITKKPAG 1124

Query: 1056 TPVSERAVPVAIFETDAEIMKFYLRKWCKTSSD------VGIRSIVDWSYYKQRLSSAIQ 1109
             P S+RAVPV IF+T+A + + +L+ W K            +R +VDW YY  RLSSAIQ
Sbjct: 1125 APTSQRAVPVIIFQTEASVARSFLKDWLKDHPPGEPDEVPDMRQLVDWDYYTTRLSSAIQ 1184

Query: 1110 KIITIPAAMQKVSNPVPRVVHPDWLYKKVREKEDKFRQRKLVDIFSSLKKDDFLNKTCNA 1169
            KII+IPAA+Q V NP PRV HPDWL K VREK+D F+QRK+ D+F++L   D      NA
Sbjct: 1185 KIISIPAALQHVKNPCPRVAHPDWLTKMVREKDDTFKQRKVKDLFAALAPKDV-----NA 1239

Query: 1170 ETNLMDE-------------------NVEDLEDFPKKRRNSVNGPRPIVRCFEVNNEQKT 1210
                + E                   ++ED+ D         +GPR + R F    E   
Sbjct: 1240 RLAELGEKTPGGGGKTGGGCGGDDELDMEDVGDRGGSLIGKTSGPR-VRRFFRGAAEDAA 1298

Query: 1211 VKTTDQVDS------------------------------LRQQLEPSEVSDQQPSSQNAI 1240
                   D                               +R++  P +  D    +  A 
Sbjct: 1299 PGGGGDRDRWPTTPENAAGGAAPRAPGSGPSPDVPGPAIVRKRRGPPDPVDVAREALEAF 1358

Query: 1241 DTENIDRIVDYKGWLELKKRKWKDNLDRRKKQKLGSLRASHQANGVSESLGDMINHKEAQ 1300
              +  D+ VDY GWL+  K KW+     RK+++L   +A   A+G    +G M   +  +
Sbjct: 1359 G-DAPDKRVDYAGWLQHCKAKWRLQRATRKRRRLEEEKALAAASGA--IVGAMTPGRGMR 1415

Query: 1301 RR------TGVGSYFRRQETAMTRCHWQIIQLVPSSQS--GVFLAWVVVEGIMVRIPITV 1352
                     G+G++   +E  +    WQ++Q+  S+    G F  WV+  G +  + +  
Sbjct: 1416 TGPRLLGPGGLGAFVESRERTLQNAPWQLVQVERSAGGGPGAFTVWVLAGGSLHAVSVRA 1475

Query: 1353 PRLFYLNSKDPIVEKFPG----RRVNKTLPHGRRSFNLIEVMIDEDQFRKESKKLAALLA 1408
             R   +  +    E   G    RR+   LP G ++ ++ EV +DE  F K   ++  LLA
Sbjct: 1476 TRRLAVAMRVADKEGDLGVGGKRRIAAALPRGGKADHVYEVKMDESDF-KSGLEVVDLLA 1534

Query: 1409 DPEV 1412
            DP V
Sbjct: 1535 DPNV 1538



 Score =  386 bits (992), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 224/675 (33%), Positives = 336/675 (49%), Gaps = 106/675 (15%)

Query: 1414 VLGWQQNAAKIGMQRCAASSQWFNERISLARYAHI------------------------- 1448
             LGWQ NAAK+   R  A+  W  ER++++RYAH+                         
Sbjct: 1784 ALGWQLNAAKLAAARLQAAGGWLAERVAISRYAHVPVGNLGSDWCLHTADTFFARALRDA 1843

Query: 1449 ---LWISDDGVPDLGGTSEEDECFA-DEVHQPV---LTYPGAYRKVSVELKIHHLSVNAL 1501
               LW    GVPDLGG + +      D+  + V   +T PGAYR V VELK HHL+V A+
Sbjct: 1844 DQLLWTGPGGVPDLGGGASDGALSGLDDALRTVRAEVTNPGAYRCVCVELKAHHLAVCAI 1903

Query: 1502 LKSNQVNEMEGGGLFGFDQDMNSGPYNNEL-CGFDETTSSAPAFRVVKQLIQRCLTDAVT 1560
              ++ +N++E G L G+D   N+G        G      +A AFR ++ L+   L DA  
Sbjct: 1904 ANAHLLNDLEQGALLGYDVGANAGKGKTASEQGVRGGHEAAAAFRTLRILVNNWLVDATE 1963

Query: 1561 SGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEFRKLGATIIFANF 1620
              N +ADA+L  L RWL S  S L +P L  ++   ++KVF +LLAE +KLGA ++ A+ 
Sbjct: 1964 RRNPYADALLGQLRRWLLSAFSSLREPALRHLVELCVKKVFTLLLAEVKKLGAVVVHADT 2023

Query: 1621 SKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLFMDQYNYGGIPAR 1680
              + I TGK  L++A A+ D L  +L+ RELF W+ELEP   WHSLLF   Y+YGG+ A 
Sbjct: 2024 QTITIATGKTRLASAAAFVDGLRASLRRRELFSWLELEPSRQWHSLLFRGPYDYGGLLAS 2083

Query: 1681 A----------DESLDDDSQVDIVSS---------------WNIAEYLPKEIQDHFVLVV 1715
            +          D    DD ++D  ++               WNIA +LP+ +++HF ++V
Sbjct: 2084 SLPGAAAWSGHDTQGPDDVELDPGTTNARDASDAADALDMHWNIASFLPESLREHFEVIV 2143

Query: 1716 SEFMYIPW--KHAQKLAASRASLQ----------EGSSC----TPSITVAAAENFESHI- 1758
            SEF++ PW  +H   L  +  S +          EG        P   +   E     + 
Sbjct: 2144 SEFIFRPWKHEHGGGLEDAAESARRREIDRHLEDEGDDALDEEPPPEMMQQREYHHGDLD 2203

Query: 1759 -----------------------VQYVKGEISSYFTGKLLSIVRDAIHHMKKMNNDQHNS 1795
                                     ++  ++  YF+ ++L +  +   H+    + + + 
Sbjct: 2204 HEREDGLPATTRREAAAAEEERRAAWLGAQVEGYFSQRVLRLAGEIQKHLGPGASARASP 2263

Query: 1796 PGVMQTAANIH-----KVDAPLEFIKHVCAAFALDQNVQHDVLVMRKNLLKYVRVREFAP 1850
                 T    H     +    L FIK +CAA +LD  V+  V ++RKN LK +RV E+AP
Sbjct: 2264 QDAFPTPPGAHLPKDLRGSPALAFIKTLCAALSLDTTVEGHVALLRKNALKLLRVPEYAP 2323

Query: 1851 EAEFRDPCPSFILPNVICSYCNDCRDLDLCRDMALLAQ-DWHCAMPQCGQPYDREVMENA 1909
            +AEFR+PC +F+L + +C YC DCRDLDLCRD  L+ +  W C    C  PYD + +E A
Sbjct: 2324 QAEFREPCVTFVLRDAVCGYCGDCRDLDLCRDRRLVDEGSWDCV--GCDAPYDPQWIEGA 2381

Query: 1910 LLQIVRQRERLYHLQDLVCIRCNQVKAAHLAEQCACAGSFRCKEDASDFRSKMQIFLNIA 1969
            L+  V +R R   LQDL C R  ++K  HL  +C C G + C E A+     +++  +IA
Sbjct: 2382 LVAHVNERMRCSALQDLRCTRDRKIKRDHLGSRCVCGGLYACTESATGAADDLRVMRDIA 2441

Query: 1970 NRQGFQLLQECTSWI 1984
               GF++L++   W+
Sbjct: 2442 THHGFKVLKDVVEWV 2456


>gi|307104289|gb|EFN52544.1| hypothetical protein CHLNCDRAFT_26745 [Chlorella variabilis]
          Length = 2286

 Score = 1548 bits (4007), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 726/1141 (63%), Positives = 890/1141 (78%), Gaps = 11/1141 (0%)

Query: 28   EAKLGYDLFSEGDKRLGWLLTFASSSLEDEDTRKVYSCIDLYFVSQDGSTFKSKYKFRPY 87
            EA LG+ L ++G  RLGWL+    S   D+++   +S ++ YF+ QDG  FK++ ++ PY
Sbjct: 119  EAALGFALHTDGPDRLGWLMNMNQSQKVDKESGHAFSVVNCYFMCQDGGMFKAQVEYAPY 178

Query: 88   FYAATKEKMEMDVEAYLRRRYESQIADIEILEKEDLDLKNHLSGLHKSYLKISFDTVQQL 147
            FY   K+ +EM+V+++LRR++E  + ++E++++EDLDLKNHLSG+ +  LK++F   +QL
Sbjct: 179  FYLQVKDDLEMEVDSWLRRKFEGALKEVEVVQREDLDLKNHLSGIQRKLLKLTFWNQEQL 238

Query: 148  MDVKKDLLHVVERNQAKFDAAEAYESILTGKR-------EQRPQDFLDCIVDLREYDVPY 200
               ++++  +V RN+ + D   AY+ +   +R       ++R QD L+ IV++RE+DVPY
Sbjct: 239  QQTRREVQPIVSRNRYRRDGTSAYQLLAEQQRPAAAKAGKERLQDALESIVEMREHDVPY 298

Query: 201  HIRFAIDNDVRCGQWYDVSISSTGPLLEKRVDLLQRAEVHVCAFDIETTKLPLKFPDADY 260
            H+R+AID+DVRCG W+ V        LE+R DLLQRAE  VCAFDIETTKLPL+FP+A+Y
Sbjct: 299  HVRYAIDSDVRCGHWFTVRAKGGKVTLERRADLLQRAEPRVCAFDIETTKLPLQFPNAEY 358

Query: 261  DIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNVNNEIELLRLWFAH 320
            D + MISYMLD QGYLIINRE VG D+ + EYTPKPEFEG F V N  +E   LR WF H
Sbjct: 359  DQVFMISYMLDRQGYLIINREVVGADVGNFEYTPKPEFEGPFHVFNCADEAACLRKWFDH 418

Query: 321  MQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDKNQGECRAKFACHLDCFA 380
            M+EV+P IYVTYNGD+FDWPF+ETRAA HG  M +E+GF C++   E  ++ A H+DC  
Sbjct: 419  MREVQPAIYVTYNGDFFDWPFIETRAAKHGMDMEKEIGFACNRKSNETLSRMAVHMDCLH 478

Query: 381  WVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQMMASYSVSDAVATYYL 440
            WV RDSYLPQGS+GLK VTK KLGYDP+EV+PEDMVR A E+PQ MA+YSVSDAV+TYYL
Sbjct: 479  WVNRDSYLPQGSRGLKMVTKYKLGYDPVEVDPEDMVRLASERPQDMAAYSVSDAVSTYYL 538

Query: 441  YMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVICPNKHQSDPEKFYR 500
            YMTY+HPFIFSL+TIIPM PDEVLRKGSGTLCEMLLMVQAY+A ++ PNKH +  E+ Y+
Sbjct: 539  YMTYIHPFIFSLSTIIPMPPDEVLRKGSGTLCEMLLMVQAYQARIVAPNKHTAASERMYK 598

Query: 501  NHLLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQLLNNLDRDLQYAIKVEGKMDL 560
             HLLESETYIGG VE +ESGVFRSDLPT F+  P AY++L++ LD DL+YA++ +GKM  
Sbjct: 599  GHLLESETYIGGKVEAIESGVFRSDLPTKFRCKPEAYQRLIDKLDGDLEYALRTDGKMAP 658

Query: 561  ESVSNYDEVKNAIMEKLLRLQEEPIREECPLIYHLDVAAMYPNIILTNRLQPPSIVTDEV 620
            E   NY EV++ I   L RL++ P R+E PLIYHLDVAAMYPNIILTNRLQP SIVTDE 
Sbjct: 659  EDCKNYAEVRDEIRSMLERLRDTPTRDEVPLIYHLDVAAMYPNIILTNRLQPSSIVTDED 718

Query: 621  CTACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYYHLKKQIESE-FVDGTNGHLSKSFLDL 679
            C ACDFNRPGKTCLR++EWVWRGE +   R++Y  LK Q++SE F    +G   + + DL
Sbjct: 719  CAACDFNRPGKTCLRQMEWVWRGETYSATRAEYTSLKAQLQSETFPPAESGGPQRLWSDL 778

Query: 680  PKMEQQSRLKDRLKKYCQKAYKRVLDKPVTELREAGICMRENSFYVDTVRSFRDRRYEYK 739
               E+   LKDRLKKYCQK YKRVLDKP +E R AGIC RENSFYVDTVR+FRDRRYEYK
Sbjct: 779  AHEEKGKLLKDRLKKYCQKVYKRVLDKPTSEKRVAGICQRENSFYVDTVRAFRDRRYEYK 838

Query: 740  GLNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHKCILNSFYGYVMRKGARWYSM 799
            GL K WKGKL +AKASGN IK+Q+A+DM VLYDSLQLAHKCILNSFYGYVMRKGARWYSM
Sbjct: 839  GLTKEWKGKLDDAKASGNPIKVQQAKDMCVLYDSLQLAHKCILNSFYGYVMRKGARWYSM 898

Query: 800  EMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLPGSFPENFTFKTKDLKKKLTI 859
            EMAGVVT+TGA II+ A  LI ++GKPLELDTDGIWC LPGSFPE+F FK     K   +
Sbjct: 899  EMAGVVTHTGANIIKRANELIGQLGKPLELDTDGIWCCLPGSFPEDFKFKHSSTGKVFKM 958

Query: 860  SYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEFEVDGPYKAMILPASKEEGI 919
            SYPC MLNV VA NNTNDQ+ TLVD   + YE  SE SIEFEVDGPYKAMILPASKEEG 
Sbjct: 959  SYPCAMLNVTVAENNTNDQFATLVDSERRQYEVSSEMSIEFEVDGPYKAMILPASKEEGK 1018

Query: 920  LIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFLHGSTIEECYSAVAAVA 979
            LIKKRYAVFN DG+LAELKGFE+KRRGELKLIKVFQ E+FD+FL G ++EECY+AVAAVA
Sbjct: 1019 LIKKRYAVFNFDGSLAELKGFELKRRGELKLIKVFQGEVFDQFLKGDSLEECYAAVAAVA 1078

Query: 980  NRWLDLLDNQGKDIADSELIDYISESSTMSKSLADYGEQKSCAVTTARRLSDFLGDTMVK 1039
            NRWLD+LD +G D+ D EL+D+ISE   MSKSL +Y  +KSCAVT A+RLS+FLGD  +K
Sbjct: 1079 NRWLDMLDTRGVDLTDEELVDHISEMCVMSKSLEEYEGRKSCAVTCAKRLSEFLGDGRIK 1138

Query: 1040 DKGLRCQYIVACEPQGTPVSERAVPVAIFETDAEIMKFYLRKWCKTSSDV-GIRSIVDWS 1098
            DKGL C Y++A  P   P SERA+PVA+F T+  + K YLRKWC    DV  +R IVDWS
Sbjct: 1139 DKGLVCNYVIARNPSNLPTSERAIPVAMFSTEPAVAKAYLRKWC--GGDVPDVRHIVDWS 1196

Query: 1099 YYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLYKKVREKEDKFRQRKLVDIFSSLK 1158
            YYK+RL +AIQKIITIPAAMQ+++NPVPRV HPDWL+KKV+EKED F+Q ++  +F +  
Sbjct: 1197 YYKERLGNAIQKIITIPAAMQRLANPVPRVKHPDWLHKKVQEKEDTFKQTRIDALFGAAA 1256

Query: 1159 K 1159
            K
Sbjct: 1257 K 1257



 Score =  325 bits (833), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 199/592 (33%), Positives = 305/592 (51%), Gaps = 64/592 (10%)

Query: 1412 VEVLGWQQNAAKIGMQRCAASSQWFNERISLAR-------YAHI---------------- 1448
            +  LGWQ  AA+  + +  A+ +W   R+ LA        YAH+                
Sbjct: 1662 LPALGWQLPAARAAVAQLLAAGEWLQARMLLASACPPLHGYAHLPLSTIGPDWIIDASDA 1721

Query: 1449 ------------LWISDDGVPDLGG--TSEEDECFADEVHQPV-LTYPGAYRKVSVELKI 1493
                        LW+ D   PDL    T + +     E  Q + + +PGAYR V VEL++
Sbjct: 1722 LFARQLREAGHLLWVCDPSQPDLASRPTDQAEALTLREQQQQIEICFPGAYRCVCVELRL 1781

Query: 1494 HHLSVNALLKSNQVNEMEGGGLFGFDQDMNSGPYNNELCGFDETTS----SAP-----AF 1544
             HL+VNA+L      E+ G G       + S P    L  +  T S    S+P     A 
Sbjct: 1782 SHLAVNAVL------EVSGAGRAAAGGSIASPPC---LPAYQSTVSHPLLSSPLGLPAAR 1832

Query: 1545 RVVKQLIQRCLTDAVTSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAML 1604
            RV+K L Q  + DA    N+ AD +L++LYRW+ SP S+LHDP L +++  +MQK+   L
Sbjct: 1833 RVLKNLAQSWMEDATKRSNICADTLLRNLYRWISSPASRLHDPSLKQMVQGLMQKLLLQL 1892

Query: 1605 LAEFRKLGATIIFANFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWH 1664
            +AE +KLGAT++ A+ S +I+ TGK +L+AA  Y D +L  L  RELF+W+ L P  FWH
Sbjct: 1893 IAELQKLGATVVHADCSTLILCTGKRNLTAAVGYADYILHTLSKRELFQWLSLTPSKFWH 1952

Query: 1665 SLLFMDQYNYGGIPARADESLDDDSQVDIVSSWNIAEYLPKEIQDHFVLVVSEFMYIPWK 1724
            +LL  D++NY GI A    +L +          +  +YLP  + + F+    EF++ PW+
Sbjct: 1953 TLLLKDRFNYVGILAEVPPALQEALVATPGKLTSAEDYLPPVLHETFLAAAVEFVWKPWQ 2012

Query: 1725 HAQKLAASRASLQEGSSCTPSITVAAAENFESHI---VQYVKGEISSYFTGKLLSIVRDA 1781
             AQ+ + +  + Q GS   P   + A  + +        +++ E+   F  KLL      
Sbjct: 2013 AAQQSSLAEGATQGGSQPPPPPFLQAVRDAQESAEAQADWLRRELCGDFENKLLKQTAYV 2072

Query: 1782 IHHMKKMNNDQ-HNSPGVMQTAANIHKVDAP-LEFIKHVCAAFALDQNVQHDVLVMRKNL 1839
            + ++   +    H  P +  +     ++  P L F++ VC  FALD  V  +V  +R+++
Sbjct: 2073 VKNIGAHDGQPGHAFPRLAGSHLTDEELGTPALAFVRAVCHLFALDGEVADEVARLRRSM 2132

Query: 1840 LKYVRVREFAPEAEFRDPCPSFILPNVICSYCNDCRDLDLCRDMALLAQDWHCAMPQCGQ 1899
            L+ ++V+EF+P AEF+DPC + +L +VIC  C DC+DLDLCRD A+  +DWHC+   CG 
Sbjct: 2133 LQSMKVKEFSPAAEFKDPCLTLVLRDVICPTCQDCQDLDLCRDPAIQRRDWHCSA--CGA 2190

Query: 1900 PYDREVMENALLQIVRQRERLYHLQDLVCIRCNQVKAAHLAEQC-ACAGSFR 1950
              D   +E  L  +++Q    Y LQDL C++C  V   HL + C  C G  R
Sbjct: 2191 ERDVTAIEEQLCGVLQQAADGYQLQDLRCMKCASVATNHLQQSCDVCGGHLR 2242



 Score = 79.0 bits (193), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 46/163 (28%), Positives = 78/163 (47%), Gaps = 14/163 (8%)

Query: 1250 DYKGWLELKKRKWKDNLDRRKKQKLGSLRASHQANGVSESLGDMINHKEAQRRTGVGSYF 1309
            D++GWL  KK  W+ + + RK+++         A             +       VG+ F
Sbjct: 1334 DFRGWLAGKKAHWRRSREARKRKR---------AEAAGGGGHGGSRQRTGAGAADVGAMF 1384

Query: 1310 RRQETAMTRCHWQIIQLVPSSQSGVFLAWVVVEGIMVRIPITVPRLFYLN----SKDPIV 1365
            ++Q  A    HWQI+ +  + + GV+ AW V+ G M  IP+ +PR  Y++       P  
Sbjct: 1385 QQQAAAAAASHWQIVSIAATREPGVYKAWAVINGRMHAIPLRIPRTVYVDVAAAPGTPEA 1444

Query: 1366 EKFPGRRVNKTLPHGRRSFNLIEVMIDEDQFRKESKKLAALLA 1408
            E   G  V +TLP GR+  +  ++ ++E+ +R    +L A LA
Sbjct: 1445 EGL-GVAVRRTLPGGRQPAHTYQLSVEEEAYRSRLPELQARLA 1486


>gi|384251367|gb|EIE24845.1| DNA/RNA polymerase [Coccomyxa subellipsoidea C-169]
          Length = 2034

 Score = 1536 bits (3977), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 786/1405 (55%), Positives = 971/1405 (69%), Gaps = 115/1405 (8%)

Query: 26   ELEAKLGYDLFSEGDKRLGWLLTFASSSLEDEDTRKVYSCIDLYFVSQDGSTFKSKYKFR 85
            ELE  LG+ L  EG  RLGWL+   S++LE++++    + ++ YF+SQDGS FK++  F 
Sbjct: 24   ELEELLGFPLIKEG-TRLGWLMNLNSTTLEEKESGNTVAAVNCYFMSQDGSMFKAQVPFS 82

Query: 86   PYFYAATKEKMEMDVEAYLRRRYESQIADIEILEKEDLDLKNHLSGLHKSYLKISFDTVQ 145
            PYFY   K  ME +V+AYLRR+Y + I D+E + +EDLDLKNHLSGL +  L +SF TVQ
Sbjct: 83   PYFYLQIKGDMEAEVDAYLRRKYTTAIRDVETVFREDLDLKNHLSGLKRKLLLVSFWTVQ 142

Query: 146  QLMDVKKDLLHVVERNQAKFDAAEAYESILTGKRE---QRPQDFLDCIVDLREYDVPYHI 202
            QLMDVK+DL+  + RN++K    +AY +     ++    R QD LD +VD+REYDVPYH+
Sbjct: 143  QLMDVKRDLMPALRRNRSKAATTDAYSAFAQDAQKPGANRLQDALDALVDMREYDVPYHM 202

Query: 203  RFAIDNDVRCGQWYDVSISSTGPLLEKRVDLLQRAEVHVCAFDIETTKLPLKFPDADYDI 262
            RF ID DVRCG WYDV        LE R DLLQRAE  +CAFDIETTKLPL+FP+A+YD 
Sbjct: 203  RFQIDTDVRCGLWYDVRAKGGKVSLEPRPDLLQRAEPRICAFDIETTKLPLQFPNAEYDQ 262

Query: 263  IMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNVNNEIELLRLWFAHMQ 322
            + MISYM+D QGYLIINRE VG DIE+ EYTPKPEFEG F V N  NE   LR WF HM+
Sbjct: 263  VFMISYMIDKQGYLIINREVVGGDIENFEYTPKPEFEGPFVVWNEANEEATLRRWFDHMR 322

Query: 323  EVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDKNQGECRAKFACHLDCFAWV 382
            +VKP +YVTYNGD+FDWPF+ETRAA  G  M EE+GF+ +    E     A H+DC  W 
Sbjct: 323  QVKPAVYVTYNGDFFDWPFIETRAAKLGMDMHEEIGFKMNSKTHES----AVHMDCMHW- 377

Query: 383  KRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQMMASYSVSDAVATYYLYM 442
                          AVT+AKLGY+P+EV+PEDM+RFA E+PQ MASYSVSDAVAT+YLYM
Sbjct: 378  --------------AVTRAKLGYNPIEVDPEDMLRFAAEQPQTMASYSVSDAVATFYLYM 423

Query: 443  TYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVICPNKHQSDPEKFYRNH 502
            TY+HPFIFSL+TIIPM PDEVLRKGSGTLCEMLLMVQA++ANV+ PNKH    E  +R H
Sbjct: 424  TYIHPFIFSLSTIIPMPPDEVLRKGSGTLCEMLLMVQAFQANVVAPNKHTQVQEPMFRGH 483

Query: 503  LLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQLLNNLDRDLQYAIKVEGKMDLES 562
            LLESETYIGG                         ++L+++LD DL+YAI+VEGK+ ++ 
Sbjct: 484  LLESETYIGG-------------------------KELIDSLDTDLRYAIEVEGKLAMDD 518

Query: 563  VSNYDEVKNAIMEKLLRLQEEPIREECPLIYHLDVAAMYPNIILTNRLQPPSIVTDEVCT 622
            V NY+EV++AI   L  L++ P REECPLIYHLDVAAMYPNIILTNRLQP +IVTDE C 
Sbjct: 519  VENYEEVRDAIRASLEGLRDTPNREECPLIYHLDVAAMYPNIILTNRLQPSAIVTDEDCA 578

Query: 623  ACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYYHLKKQIESE-FVDGTNGHLSKSFLDLPK 681
            ACDFNRPGKTCLRK+ W WRGE F    ++Y+ +K Q+ESE F   T G   + +  LP 
Sbjct: 579  ACDFNRPGKTCLRKMTWEWRGETFSATSAEYFSIKNQLESERFAPETEGGPPRYYGQLPH 638

Query: 682  MEQQSRLKDRLKKYCQKAYKRVLDKPVTELREAGICMRENSFYVDTVRSFRDRRYEYKGL 741
             E+   LK+RLKKYCQ+ YKRVLDKPVTE REAG+CMREN FYV TV SFRDRRYEYKGL
Sbjct: 639  EERAKLLKERLKKYCQRVYKRVLDKPVTEAREAGVCMRENDFYVGTVLSFRDRRYEYKGL 698

Query: 742  NKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHKCILNSFYGYVMRKGARWYSMEM 801
            NK WKGKL  AKA GN I++QEA DMVVLYDSLQLAHKCILNSFYGYVMR+GARWYSMEM
Sbjct: 699  NKTWKGKLDAAKAEGNPIRVQEAADMVVLYDSLQLAHKCILNSFYGYVMRRGARWYSMEM 758

Query: 802  AGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLPGSFPENFTFKTKDLKKKLTISY 861
            AGVVTYTGA+IIQ A  L+ KIG  LELDTDGIWC LPGSFPENF  K++   K L ISY
Sbjct: 759  AGVVTYTGARIIQRAAELVRKIGTRLELDTDGIWCALPGSFPENFKLKSRK-GKDLRISY 817

Query: 862  PCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEFEVDGPYKAMILPASKEEGILI 921
            PCV+LNV VA++NTNDQYQTL++  SK YET S  SIEFEVDGPYKAMILPASKEEG LI
Sbjct: 818  PCVVLNVMVAQHNTNDQYQTLLEGDSKHYETSSRMSIEFEVDGPYKAMILPASKEEGKLI 877

Query: 922  KKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFLHGSTIEECYSAVAAVANR 981
            KKRYAVFN DGTLAELKGFE+KRRGELKLIKVFQ+E+F++FL G T+EECY+AVAAVA+R
Sbjct: 878  KKRYAVFNPDGTLAELKGFELKRRGELKLIKVFQSEVFEQFLAGDTLEECYAAVAAVADR 937

Query: 982  WLDLLDNQGKDIADSELIDYISESSTMSKSLADYGEQKSCAVTTARRLSDFLGDTMVKDK 1041
            WLDLLD QG D+ D EL++YISESSTMSK++ +Y  +KSCA+TTA+RL+ FLGD  +KDK
Sbjct: 938  WLDLLDTQGTDVTDEELLEYISESSTMSKAMDEYEGRKSCAITTAKRLAQFLGDERIKDK 997

Query: 1042 GLRCQYIVACEPQGTPVSERAVPVAIFETDAEIMKFYLRKWC-KTSSDVG------IRSI 1094
            GL C Y++A  P+  P SERA+PVAIF T+  + + +LR+WC   SS  G      +R+I
Sbjct: 998  GLNCNYVIAKRPENQPTSERAIPVAIFSTEPSVARSFLRRWCGHLSSGRGADEVPDVRAI 1057

Query: 1095 VDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLYKKVREKEDKFRQRKLVDIF 1154
            VDW YY++RL SAIQKIITIPAAMQ+V NPVPRV HPDWL+KKVREKED+ +Q+K+    
Sbjct: 1058 VDWDYYRERLGSAIQKIITIPAAMQRVPNPVPRVKHPDWLHKKVREKEDRHQQQKM---- 1113

Query: 1155 SSLKKDDFLNKTCNAETNLMDENVE-DLEDFPKKRRNSVNGPRPIVRCFEVNNEQKTVKT 1213
                 D FL      E        + D+ED    R  +    + + +   V    +  + 
Sbjct: 1114 -----DGFLRPRAALEAAASPSAADVDMEDMGVARPAAGASGQRVAKATTVQRRPEADR- 1167

Query: 1214 TDQVDSLRQQLEPSEVSDQQPSSQNAIDTENIDRIVDYKGWLELKKRKWKDNLDRRKKQK 1273
             ++ D+  +    S  +D +   ++     N  R  D  GWL  +KR+W+     RKK++
Sbjct: 1168 ENRGDARNRPAGTSGAADDEEEEEDLGPCPN--RKEDPVGWLRHQKRRWRTAAAARKKRR 1225

Query: 1274 LGSLRASHQANGVSESLGDMINHKEAQRRTGVGSYFRRQETAMTRCHWQIIQLVPSSQSG 1333
            + + R   +  G         N + A R                               G
Sbjct: 1226 IDTARERDRGQGS--------NPQPAPR-------------------------------G 1246

Query: 1334 VFLAWVVVEGIMVRIPITVPRLFYLNSK------DPIVEKFPGRRVNKTLPHGRRSFNLI 1387
            VF AWV+V   +  +P+ VPR FY+NS       D   +   G +V ++LP GR  F+L 
Sbjct: 1247 VFKAWVLVGARLYAVPLRVPRTFYVNSTRVPTDADSPAQTLGGLKVQRSLPFGREPFHLY 1306

Query: 1388 EVMIDEDQFRKESKKLAALLADPEV 1412
            +V + ED+FR+   ++A +L+ P V
Sbjct: 1307 QVTMAEDEFRRRDAEIAVVLSQPHV 1331



 Score =  211 bits (536), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 145/436 (33%), Positives = 216/436 (49%), Gaps = 75/436 (17%)

Query: 1558 AVTSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEFRKLGATIIF 1617
            AV +   F+DA+L +L+RWLCSP + L    L R +  +M+K  A L+A+ ++LGA ++ 
Sbjct: 1663 AVAAVEKFSDALLTNLWRWLCSPAAALACSGLQRTVMGLMRKTLAQLVADLKRLGARVVA 1722

Query: 1618 ANFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLFMDQYNYGGI 1677
            A+   +I+ TGK +L+AA  Y D LL A+  R+LF  ++++P  FWHSLLF D+YNY GI
Sbjct: 1723 ADAHSLILATGKHNLTAAVGYVDYLLDAVGKRDLFSLLKMDPERFWHSLLFRDRYNYLGI 1782

Query: 1678 ----PARADESLDDDSQVDIVSSWNIAE-YLPKEIQDHFVLVVSEFMYIPWKHAQKLAAS 1732
                PA+  ESL +      ++    AE ++P+  +D   L      YI W     L   
Sbjct: 1783 LADIPAQLQESLTNHPGA--LTQGGAAELHVPEPDED--ALESPALDYI-WTIKDYL--- 1834

Query: 1733 RASLQEGSSCTPSITVAAAENFESHIVQYVKGEISSYFTGKLLSIVRDAIHHMKKMNNDQ 1792
                       P   V  A    +    ++K  ++++F+ KLL +             + 
Sbjct: 1835 -----------PPKAVTEARGAAAAQEAWLKANMAAHFSRKLLGV-------------ED 1870

Query: 1793 HNSPGVMQTAANIHKVDAPLEFIKHVCAAFALDQNVQHDVLVMRKNLLKYVRVREFAPEA 1852
              +P               L F++ VC A  LD +++ +VLV+R+NLL      EFAP A
Sbjct: 1871 LGTPA--------------LAFVRAVCDALRLDASIEEEVLVLRRNLLLLTHTLEFAPAA 1916

Query: 1853 EFRDPCPSFILPNVICSYCNDCRDLDLCRDMALLAQDWHCAMPQCGQPYDREVMENALLQ 1912
            EF++PC SF+L N                        W C    CG  Y+   +E  LL+
Sbjct: 1917 EFQEPCRSFVLRN---------------------EHQWSCR--NCGCAYELATVEAQLLR 1953

Query: 1913 IVRQRERLYHLQDLVCIRCNQVKAAHLAEQC-ACAGSFRCKEDASDFRSKMQIFLNIANR 1971
             VR R R Y LQDL C++C QV   HL   C  C G+    E A+ F   + +F N+A  
Sbjct: 1954 AVRLRARAYQLQDLRCLKCRQVLRGHLRRNCDQCGGALANTEPAAAFTEALTVFRNVATY 2013

Query: 1972 QGFQLLQECTSWILEV 1987
             GFQLLQ+ T W+L++
Sbjct: 2014 HGFQLLQDATEWLLQM 2029


>gi|145352297|ref|XP_001420487.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144580721|gb|ABO98780.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 2198

 Score = 1536 bits (3977), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 786/1425 (55%), Positives = 1004/1425 (70%), Gaps = 52/1425 (3%)

Query: 10   DGRRTKKQKLIRSAEEELEAKLGYDLFSEGDKRLGWLLTFASSSLEDEDTRKVYSCIDLY 69
            DGR TK Q  + + E+ L+ +LG+    +G+ R+GW++  +S+ +ED+++ K Y+ ++ Y
Sbjct: 5    DGR-TKAQ--VAAEEDALQKELGFGTHVDGEDRIGWMINASSTQVEDKESGKAYAAVNCY 61

Query: 70   FVSQDGSTFKSKYKFRPYFYAATKEKMEMDVEAYLRRRYESQIADIEILEKEDLDLKNHL 129
            F++QDGSTFK++ K+ PYFY ATK   E +VEA LRR+Y  Q+ D+E+++KEDLDLKNHL
Sbjct: 62   FMAQDGSTFKAQVKYAPYFYLATKTGCEHEVEALLRRKYGEQVLDVEMVDKEDLDLKNHL 121

Query: 130  SGLHKSYLKISFDTVQQLMDVKKDLLHVVERNQAKFDAAEAYE------SILTGKREQRP 183
            SGL ++YLK+SF T Q+LMDV++++L +V +N+ K  AA AYE      S+  G + ++ 
Sbjct: 122  SGLQQTYLKVSFATTQELMDVRREILPIVSKNKKKSSAAAAYEALSHQESLDAGIKPKKK 181

Query: 184  --QDFLDCIVDLREYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLLEKRVDLLQRAEVHV 241
               D+ + ++D+REYDVPYH+R+ ID DVRCG+WY V        L  +  +L R EV V
Sbjct: 182  ALTDYEEAMIDIREYDVPYHMRYMIDTDVRCGKWYSVRAEHGAVTLTLQEQMLDRGEVRV 241

Query: 242  CAFDIETTKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGY 301
            CAFDIETTKLPLKFPDA++D + MISYMLDGQGYLIINRE V ED+ED EYTPKPE++G 
Sbjct: 242  CAFDIETTKLPLKFPDAEHDQVFMISYMLDGQGYLIINREIVSEDVEDFEYTPKPEYKGP 301

Query: 302  FKVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQC 361
            F V NV NE  L+R WF HM+E +P IYVTYNGDYFD+PF+ETRA  +G  M  E+GF+C
Sbjct: 302  FIVWNVPNEQALIRTWFDHMRETQPSIYVTYNGDYFDFPFIETRATKNGMDMYREIGFKC 361

Query: 362  DKNQGECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKE 421
            +++ GECR+  A HLDCFAWVKRDSYLP GS GLKAVTKAKL YDP+EV+PEDM+ +A+ 
Sbjct: 362  EQS-GECRSNSALHLDCFAWVKRDSYLPAGSHGLKAVTKAKLKYDPVEVDPEDMLPYAQS 420

Query: 422  KPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAY 481
             PQMMASYSVSDAV+TYYLYM YVHPFIF+L+TIIP+SPDEVLRKGSGTLCE LLMV+AY
Sbjct: 421  HPQMMASYSVSDAVSTYYLYMKYVHPFIFALSTIIPLSPDEVLRKGSGTLCEALLMVEAY 480

Query: 482  KANVICPNKHQSDPEKFYRNHLLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQLL 541
              N++CPNK  S  EK+Y  HLL SETYIGGHVECLE+GVFRSD+P  FKL+P  Y++LL
Sbjct: 481  HGNIVCPNKQVSAGEKYYEGHLLNSETYIGGHVECLEAGVFRSDIPCDFKLNPEGYQRLL 540

Query: 542  NNLDRDLQYAIKVEGK-MDLESVSNYDEVKNAIMEKLLRLQEEPIREECPLIYHLDVAAM 600
            +NLD DL YA++VEGK +  +  ++YDE++  I EKL  L++ P     PLIYHLDVAAM
Sbjct: 541  DNLDDDLDYALRVEGKGLGKDDCADYDEIRAQIAEKLEYLRDNPNLNMEPLIYHLDVAAM 600

Query: 601  YPNIILTNRLQPPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYYHLKKQI 660
            YPNIILTNRLQP +IV ++VC ACD+NRPGK CLR++EWVWRGE F    S+Y  +K Q+
Sbjct: 601  YPNIILTNRLQPAAIVNEDVCAACDYNRPGKGCLREMEWVWRGEHFASTSSEYAAIKAQL 660

Query: 661  E-SEFVDGTNGHLSKSFLDLPKMEQQSRLKDRLKKYCQKAYKRVLDKPVTELREAGICMR 719
            +  +F     G   +++ +LP  EQQ + K RLK Y QK Y++V++KPVT  ++A ICMR
Sbjct: 661  QVDKFAPSHPGGPQRTWAELPYEEQQEQKKQRLKLYTQKVYRKVMEKPVTATKKASICMR 720

Query: 720  ENSFYVDTVRSFRDRRYEYKGLNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHK 779
            EN FY+DTV++FRDRRY YKG NK WK  L EAK SGN I+IQ+A +MVVLYDSLQLAHK
Sbjct: 721  ENPFYIDTVKAFRDRRYVYKGENKKWKNNLDEAKQSGNIIEIQKAANMVVLYDSLQLAHK 780

Query: 780  CILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLP 839
            CILNSFYGYVMRKGARWYSMEMAGVVT TGAKIIQ A+ L++ IGKPLELDTDGIWC LP
Sbjct: 781  CILNSFYGYVMRKGARWYSMEMAGVVTNTGAKIIQMAKQLVDDIGKPLELDTDGIWCCLP 840

Query: 840  GSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTL--VDPVSKTYETHSECS 897
             +FPE FTF   +  K   ISYPCV+LN   A  NTNDQYQTL  VD  S +YE  SE S
Sbjct: 841  RAFPETFTFTLPNKNKGYKISYPCVVLNRMTALQNTNDQYQTLKVVDGKS-SYEVSSEMS 899

Query: 898  IEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAE 957
            IEFEVDGPYKAMILPASKEEG+LIKKRYAVFN+DG+L ELKGFE+KRRGELKLIKVFQAE
Sbjct: 900  IEFEVDGPYKAMILPASKEEGVLIKKRYAVFNEDGSLEELKGFELKRRGELKLIKVFQAE 959

Query: 958  LFDKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLADYGE 1017
            +FD FL G T+EE Y AV  + NRW D+L  QG++  D EL+++ISESS MSK   DYG+
Sbjct: 960  VFDYFLKGETLEEVYKAVGNIGNRWFDMLKTQGRNFDDEELLEFISESSVMSKPAIDYGD 1019

Query: 1018 QKSCAVTTARRLSDFLGDTMVKDKGLRCQYIVACEPQGTPVSERAVPVAIFETDAEIMKF 1077
            +KS ++TTA RLS FLG  ++KDKGL C+YI++ +P G P S RA+PV+IF  +  + + 
Sbjct: 1020 RKSTSLTTAHRLSQFLGADLIKDKGLVCKYIISKKPLGAPTSARAIPVSIFNAETAVARA 1079

Query: 1078 YLRKWCKTSSDVG------IRSIVDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHP 1131
            YL++W K +          +R +VDW YYK RL+ AIQKII+IPAA+Q V NP P V HP
Sbjct: 1080 YLKEWTKDALPGADDEMPNMREMVDWEYYKTRLAGAIQKIISIPAALQGVENPCPDVKHP 1139

Query: 1132 DWLYKKVREKEDKFRQRKLVDIFSSLKKDDFLNKTCNAETNLMDENVEDLEDFPKKRRNS 1191
            DWL+K++REK DKF QR L  +F +     F N    A  +L   N+ D+ED   K   +
Sbjct: 1140 DWLHKRIREKNDKFSQRNLKTMFQT----QFANGAPLAGKDL---NILDIEDGGAKSTPT 1192

Query: 1192 VNGPRPIVRCFEVNNEQKTVKTTDQVDSLRQQLEPSEVSDQQPSSQNAIDTENIDRIVDY 1251
                RP VR F         +  D   +  Q+  PS  + + P S +A      DR  DY
Sbjct: 1193 ----RPRVRTFR--------RDGDAPQTPDQRATPSGEAPKTPGSASASAAAP-DRATDY 1239

Query: 1252 KGWLELKKRKWKDNLDRRKKQKLGSLRASHQANGVSESLGDMINHKEAQRRTGVGSYFRR 1311
             GWL+  K KWK      K++++   +   Q     E  G ++  K      G+ S+   
Sbjct: 1240 DGWLKHYKSKWKTLRANIKRERVEDEKERAQI----EREGGVMRRKRRSGAFGLESFVES 1295

Query: 1312 QETAMTRCHWQIIQLVPSSQSGVFLAWVVVEGIMVRIPITVPRLFYLNSKDPIVEKFPG- 1370
            +E  +      IIQ+  +   G+F  WV+V G M  I + VPR   + +++   E   G 
Sbjct: 1296 REETIAHSTMHIIQVEQTQVPGIFAVWVLVNGTMQVIKVDVPRRLVIATRETDREGDLGL 1355

Query: 1371 ---RRVNKTLPHGRRSFNLIEVMIDEDQFRKESKKLAALLADPEV 1412
               RR+  TLP G  + +L E+ + E  F     ++AALLADP V
Sbjct: 1356 EGKRRITATLPRGFIAPHLYEINVQERNF-ASGLEIAALLADPSV 1399



 Score =  401 bits (1030), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 222/614 (36%), Positives = 323/614 (52%), Gaps = 82/614 (13%)

Query: 1416 GWQQNAAKIGMQRCAASSQWFNERISLARYAHI--------------------------- 1448
            GWQ +AAKI   R   S++W  E + +A YAHI                           
Sbjct: 1622 GWQLDAAKIASARVVESAEWLKEHVEIASYAHIPVGNLKSDWWVHTADAFFARTLHDAEQ 1681

Query: 1449 -LWISDDGVPDLGGTSEE------DECFADEVHQPVLTYPGAYRKVSVELKIHHLSVNAL 1501
             LW    G PDLGG +        D+ +     +  +T PGAYR V VEL++HHL+V A+
Sbjct: 1682 VLWTGPGGEPDLGGGASAVSLSGLDDAYGASRME--VTAPGAYRSVCVELQVHHLAVCAI 1739

Query: 1502 LKSNQVNEMEGGGLFGFDQDMNSGPYNNELCGFDETTSSAPAFRVVKQLIQRCLTDAVTS 1561
             KS+ +N++E G L GF+    +G       G  E   +A AF+ + +L+   L DA   
Sbjct: 1740 SKSSILNDLEQGALLGFE----TGTKGTTRMGGHE---AAGAFKTLNKLVDNWLRDATDH 1792

Query: 1562 GNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEFRKLGATIIFANFS 1621
             N +AD +L  ++RWL SP S L DP L  ++   M+KVF +LLAE RKL   +++A+  
Sbjct: 1793 HNTYADQLLSQIHRWLFSPSSALRDPALKNLVELCMKKVFTLLLAELRKLQVEVVYADMR 1852

Query: 1622 KVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLFMDQYNYGGIPARA 1681
            ++II TGK DL++A A  + L  AL  RELF W++L+ V  WHSLLF   ++Y GI A  
Sbjct: 1853 RIIIATGKHDLASASACVEGLKTALHQRELFSWLQLDRVKQWHSLLFRGPFDYAGISAVN 1912

Query: 1682 DESLDDDSQVDIVSSWNIAEYLPKEIQDHFVLVVSEFMYIPWKHAQKLAASRASLQEGSS 1741
                  +  +D+   WNIA +LP+ IQDHF  ++ EF+ +PWKH ++ +  +        
Sbjct: 1913 LPGESHEGALDM--HWNIARFLPEAIQDHFHAIIGEFLLLPWKHDKEESDDK-------- 1962

Query: 1742 CTPSITVAAAENFESHIVQYVKGEISSYFTGKLLSIVRD-----AIHHMKKMNNDQHNSP 1796
                             V +++ ++ S+F  KLL   +D      +   +     Q  SP
Sbjct: 1963 -----------------VIWLEQQLESHFGPKLLRYAQDIQRVLGLAGPRSPPEHQFPSP 2005

Query: 1797 GVMQTAANIHKVDAPLEFIKHVCAAFALDQNVQHDVLVMRKNLLKYVRVREFAPEAEFRD 1856
                 +  +    A L F++ V A  +LD  V+  V ++R+N LK ++V EF+PEAEF +
Sbjct: 2006 PGANLSKKLRGTPA-LAFVRTVIAVLSLDARVEGPVSLLRRNALKMIQVAEFSPEAEFVE 2064

Query: 1857 PCPSFILPNVICSYCNDCRDLDLCRDMALLAQDWHCAM------PQCGQPYDREVMENAL 1910
            PC SF L +VICS C+DCRDLDLCRD  L A  W C        P CGQPYD + +E AL
Sbjct: 2065 PCVSFTLRDVICSACSDCRDLDLCRDPDLAAGHWACTARDDDHGPPCGQPYDMQWIEGAL 2124

Query: 1911 LQIVRQRERLYHLQDLVCIRCNQVKAAHLAEQCACAGSFRCKEDASDFRSKMQIFLNIAN 1970
            +  V +R R Y LQDL C R  ++K  HLA +CAC G + C          +++F NIA+
Sbjct: 2125 VAEVNERVRKYQLQDLKCARDGRIKVGHLANRCACGGLYACSAKPGALGDDLRVFSNIAD 2184

Query: 1971 RQGFQLLQECTSWI 1984
               F++L++   W+
Sbjct: 2185 AHDFKILRDTVDWV 2198


>gi|308809387|ref|XP_003082003.1| DNA polymerase delta, catalytic subunit (ISS) [Ostreococcus tauri]
 gi|116060470|emb|CAL55806.1| DNA polymerase delta, catalytic subunit (ISS) [Ostreococcus tauri]
          Length = 2339

 Score = 1471 bits (3807), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 761/1420 (53%), Positives = 980/1420 (69%), Gaps = 56/1420 (3%)

Query: 20   IRSAEEELEAKLGYDLFSEGDKRLGWLLTFASSSLEDEDTRKVYSCIDLYFVSQDGSTFK 79
            I + E+ L A+LG+   S GD R+GWL+  +S+ +ED+++ K ++ ++LYF+ QDGSTFK
Sbjct: 57   IAAEEDALHAELGFGTHSGGDDRIGWLINVSSTQVEDKESGKAFAAVNLYFMEQDGSTFK 116

Query: 80   SKYKFRPYFYAATKEKMEMDVEAYLRRRYESQIADIEILEKEDLDLKNHLSGLHKSYLKI 139
            ++ K++PYFY ATK   E +VEA LRRRY  QIAD+ + +KEDLDLKNHLSGL ++YLK+
Sbjct: 117  AQVKYKPYFYVATKTGCEHEVEALLRRRYGEQIADVVMEDKEDLDLKNHLSGLKQTYLKV 176

Query: 140  SFDTVQQLMDVKKDLLHVVERNQAKFDAAEAYE------SILTGKREQRPQ--DFLDCIV 191
             F TVQ+LMDV++++L +V +N+ K  AA AYE      SI  G + ++ Q  D+ + +V
Sbjct: 177  EFLTVQELMDVRREILPIVSKNKKKTSAASAYEALSRQESIDAGNKPRKLQLTDYEEAMV 236

Query: 192  DLREYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLL-----EKRVDLLQ-RAEVHVCAFD 245
            D+REYDVPYH+R+ ID +VRCG WY+V +      +     +   D+L+ + E  VCAFD
Sbjct: 237  DIREYDVPYHMRYLIDENVRCGMWYNVHVEQGNARVTLQDAKSGNDMLEVKGEPRVCAFD 296

Query: 246  IETTKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVT 305
            IETTKLPLKFPDA++D + MISYMLDGQGYLI NRE V ED+ED EYTPK E++G F V 
Sbjct: 297  IETTKLPLKFPDAEHDQVFMISYMLDGQGYLITNREIVSEDVEDFEYTPKEEYQGPFIVW 356

Query: 306  NVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDKNQ 365
            N  NE  LLR WF HM+E +P IYVTYNGDYFD+PF+ETRA  +G  M  E+GF+C+++ 
Sbjct: 357  NEANEQALLRRWFDHMREAQPSIYVTYNGDYFDFPFIETRAKKNGMDMYREIGFKCEQS- 415

Query: 366  GECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQM 425
            GECR+  A HLDCF WVKRDSYLP GS GLKAVTKAKL +DP+EV+PEDM+ FA+ +PQ 
Sbjct: 416  GECRSTSALHLDCFCWVKRDSYLPAGSHGLKAVTKAKLKFDPVEVDPEDMLPFAQSRPQH 475

Query: 426  MASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANV 485
            MA YSVSDAV+TYYLY  +VH FIF+L+TIIP+SPDEVLRKGSGTLCE LLMVQAY+  +
Sbjct: 476  MAQYSVSDAVSTYYLYKKFVHDFIFALSTIIPLSPDEVLRKGSGTLCESLLMVQAYEGEI 535

Query: 486  ICPNKHQSDPEKFYRNHLLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQLLNNLD 545
            +CPNK     E++Y  HLL SETYIGGHVECL++GV+RSD+P  F L P  Y++LL+ LD
Sbjct: 536  VCPNKQVGAGEQYYNGHLLNSETYIGGHVECLQAGVYRSDIPCDFNLTPDGYQKLLDTLD 595

Query: 546  RDLQYAIKVEGKMDLESVSNYDEVKNAIMEKLLRLQEEPIREECPLIYHLDVAAMYPNII 605
             DL+YA++VEGKM    VSNYDE++ AI+EKL  L++ P  +  PLIYHLDVAAMYPNII
Sbjct: 596  DDLKYALEVEGKMKQSDVSNYDEIRAAIVEKLEFLRDNPRIKSKPLIYHLDVAAMYPNII 655

Query: 606  LTNRLQPPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYYHLKKQIESE-F 664
            LTNRLQP ++VT++VC ACD+NRPGK CLR+LEWVWRGE F    S+Y  +K Q++ + F
Sbjct: 656  LTNRLQPAAMVTEDVCAACDYNRPGKKCLRELEWVWRGEHFASTSSEYAQIKAQLQVDTF 715

Query: 665  VDGTNGHLSKSFLDLPKMEQQSRLKDRLKKYCQKAYKRVLDKPVTELREAGICMRENSFY 724
                 G  S+++ +L   EQQ + K+RLK Y QK Y++V++KPVT  + AGIC REN+FY
Sbjct: 716  PAADPGGSSRTWYELSYEEQQEQKKNRLKMYTQKVYRKVMEKPVTATKTAGICQRENAFY 775

Query: 725  VDTVRSFRDRRYEYKGLNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHKCILNS 784
            +DTVR+FRDRRY YKG NK    +L  AK +G+   IQ+A + VVLYDSLQLAHKCILNS
Sbjct: 776  IDTVRAFRDRRYVYKGKNKEAGKQLEAAKQAGSIADIQQAANNVVLYDSLQLAHKCILNS 835

Query: 785  FYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLPGSFPE 844
            FYGYVMRKGARWYSMEMAGVVT TGAKIIQ A+ L++ IG PLELDTDGIWC LP  FPE
Sbjct: 836  FYGYVMRKGARWYSMEMAGVVTNTGAKIIQMAKQLVDDIGMPLELDTDGIWCCLPCEFPE 895

Query: 845  NFTFKTK-DLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEFEVD 903
            ++TF  K + KK   ISYPCV+LN   A  NTNDQY T  D  + TY+  SE SIEFEVD
Sbjct: 896  DYTFTMKGEGKKPYQISYPCVVLNRMTAVRNTNDQYLTF-DEKTGTYKQSSEMSIEFEVD 954

Query: 904  GPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFL 963
            GPYKAMILPASKEEG+LIKKRYAVF++ G L ELKGFE+KRRGELKLIKVFQ+E+FD FL
Sbjct: 955  GPYKAMILPASKEEGVLIKKRYAVFDEAGKLVELKGFELKRRGELKLIKVFQSEVFDYFL 1014

Query: 964  HGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLADYGEQKSCAV 1023
             G T++  Y AV A+ANRW D+L  +G    D EL++YISESS MSK   DYG++KS ++
Sbjct: 1015 KGETLDGVYQAVGAIANRWFDMLKTRGAKFDDEELMEYISESSVMSKPAIDYGDRKSTSL 1074

Query: 1024 TTARRLSDFLGDTMVKDKGLRCQYIVACEPQGTPVSERAVPVAIFETDAEIMKFYLRKWC 1083
            TTARRL+ FLG  +VKDKGL C+YI++ +P G P S+RA+PV+IF  +  + + +L++W 
Sbjct: 1075 TTARRLAQFLGADLVKDKGLVCKYIISKKPLGAPTSQRAIPVSIFNAEVSVARSFLKEWT 1134

Query: 1084 KTSSDVG-------IRSIVDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLYK 1136
            K +   G       +R +VDW YYK RL+ AIQKII+IPAA+Q V NP P V  PDWL K
Sbjct: 1135 KDNDLSGEDDEMPDMRDLVDWEYYKTRLAGAIQKIISIPAALQGVENPCPDVKLPDWLNK 1194

Query: 1137 KVREKEDKFRQRKLVDIFSSLKKDDFLNKTCNAETNLMDENVEDLEDFPKKRRNSVNGPR 1196
            ++REK DKF Q+ L  +F +            A     D N+ D+ED       S  G  
Sbjct: 1195 RIREKNDKFAQQDLKKMFRA-------QFAAGAPLAKKDLNMLDIED-------SFTGTP 1240

Query: 1197 PIVRCFEVNNEQKTVKTTDQVDSLRQQLEPSEVSDQQPSSQNAIDTENIDRIVDYKGWLE 1256
               R   +       +T +QV      + P+  + + P S +A  TE  DR  DY GWL+
Sbjct: 1241 SRARARSLLTNGDAPRTPEQV------VTPNGKAPRTPGSASA--TEAPDRETDYDGWLK 1292

Query: 1257 LKKRKWKDNLDRRKKQKLGSLRASHQANGVSESLGDMINHKEAQRRTGVGSYFRRQETAM 1316
              K KWK      K+ ++       +    +E  G ++  +      G+ S+   +E  +
Sbjct: 1293 FYKAKWKTLRANIKRLRV----EDEKERAAAEREGGVVRRRRRSGAIGLESFVESREETI 1348

Query: 1317 TRCHWQIIQLVPSSQSGVFLAWVVVEGIMVRIPITVPRLFYLNSK--DPIVE--KFPGRR 1372
                  IIQ+  +   GVF  WV V G M  I I +PR   + ++  DP  E  K    R
Sbjct: 1349 AHSIMHIIQVEETRTPGVFAVWVYVNGGMQSIKIDIPRRLVIATREADPEGEFGKADKHR 1408

Query: 1373 VNKTLPHGRRSFNLIEVMIDEDQFRKESKKLAALLADPEV 1412
            +  +LP G  S +L EV + E         ++ALLADP V
Sbjct: 1409 IVASLPRGFTSPHLYEVNVPERTL-SAGVDISALLADPNV 1447



 Score =  394 bits (1011), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 238/665 (35%), Positives = 334/665 (50%), Gaps = 106/665 (15%)

Query: 1416 GWQQNAAKIGMQRCAASSQWFNERISLARYAHI--------------------------- 1448
            GWQ + AK    R   +S+W    I +A YAHI                           
Sbjct: 1674 GWQLDVAKTATMRITGNSEWLQRYIEVASYAHIPIGNLKSDWWVHTADTFFARSLQDDDQ 1733

Query: 1449 -LWISDDGVPDLGGTSEE------DECFADEVHQPVLTYPGAYRKVSVELKIHHLSVNAL 1501
             LW    G PDLGG +        D+ +     +  ++ PGAYR V VEL++HHL+V A+
Sbjct: 1734 VLWSGPSGEPDLGGGASAVSLSGLDDTYGATRME--VSAPGAYRSVCVELQVHHLAVCAI 1791

Query: 1502 LKSNQVNEMEGGGLFGFDQDMNSGPYNNELCGFDETTSSAPAFRVVKQLIQRCLTDAVTS 1561
             KS  +N++E G L GF+    +G       G  E   SA AF+ +++L++  L DA   
Sbjct: 1792 SKSGILNDLEQGALLGFE----TGTKGTTRVGGHE---SAGAFKTLRKLVENWLRDATDR 1844

Query: 1562 GNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEFRKLGATIIFANFS 1621
             N +AD +L  L+RWL SP S L DP L  ++   M+KVF +LLAE RKL   +++A+  
Sbjct: 1845 HNHYADELLSQLHRWLFSPFSVLRDPALKNLVELCMKKVFTLLLAELRKLQVDVVYADMR 1904

Query: 1622 KVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLFMDQYNYGGIPARA 1681
            ++II TGK DL++A +  + +  AL+ RELF W++L+ V  WHSLLF   ++Y GI A +
Sbjct: 1905 RIIIATGKHDLASASSCVEGVTHALRQRELFSWLQLDSVKQWHSLLFRGPFDYAGITAAS 1964

Query: 1682 --------------DESLD----DDSQVDIVSSWNIAEYLPKEIQDHFVLVVSEFMYIPW 1723
                          D SLD     +S+  +   WNIA +LP+ IQDHF  +V EF+ +PW
Sbjct: 1965 LPGESQWQDSIAPNDASLDPLAFHNSEGALDMHWNIARFLPESIQDHFHAIVGEFLLLPW 2024

Query: 1724 KHAQ-------------KLAASRAS-------------------LQEGSSCTPSITVAA- 1750
            K  Q             K  A   S                   + +    TPSI   + 
Sbjct: 2025 KFEQNGGDEPYRGRTPVKFRAMEDSESDDDLNCDLNSASDDELPMAQRHPGTPSIAHNSR 2084

Query: 1751 -AENFESHIVQYVKGEISSYFTGKLLSIVRD-----AIHHMKKMNNDQHNSPGVMQTAAN 1804
              EN E+  V ++  +I S+F+ KLL   ++      I   +     Q  +P     +  
Sbjct: 2085 DLENLENEKVSWLVRQIDSHFSPKLLRYAQEIQKVLGIPGPRSPAEHQFPTPPGSHLSKE 2144

Query: 1805 IHKVDAPLEFIKHVCAAFALDQNVQHDVLVMRKNLLKYVRVREFAPEAEFRDPCPSFILP 1864
            I    A L F+K V A  +LD +V   V ++R+N LK +RV EFAPEAEF +PC S+ L 
Sbjct: 2145 IRGTPA-LAFVKTVIAVLSLDASVADSVSLLRRNALKMIRVGEFAPEAEFIEPCVSYTLR 2203

Query: 1865 NVICSYCNDCRDLDLCRDMALLAQDWHCAMPQ-----CGQPYDREVMENALLQIVRQRER 1919
            +VICS C DCRDLDLCRD  L A  W C+        C QPYDR+ +E AL+  V  R R
Sbjct: 2204 DVICSACCDCRDLDLCRDPDLAAGHWACSYRDEHGLLCAQPYDRQWVEGALVAEVNDRVR 2263

Query: 1920 LYHLQDLVCIRCNQVKAAHLAEQCACAGSFRCKEDASDFRSKMQIFLNIANRQGFQLLQE 1979
             Y LQDL C+R  +VK  HL  +CAC G F C          +++F +IA    F +L+E
Sbjct: 2264 KYQLQDLKCVRDGRVKVGHLGNRCACGGLFTCSAKDGSLGDDLRVFSSIAEAHDFNILRE 2323

Query: 1980 CTSWI 1984
              SW+
Sbjct: 2324 TVSWV 2328


>gi|348528405|ref|XP_003451708.1| PREDICTED: DNA polymerase epsilon catalytic subunit A [Oreochromis
            niloticus]
          Length = 2292

 Score = 1446 bits (3742), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 731/1418 (51%), Positives = 985/1418 (69%), Gaps = 63/1418 (4%)

Query: 25   EELEAKLGYDLFSEGDKRLGWLLTFASSSLEDEDTRKVYSCIDLYFVSQDGSTFKSKYKF 84
            +E++A+ G+D   E  ++ GWL+    + + DED R + S +D YF+ +DGS FK    F
Sbjct: 41   DEMDARFGFDRMKEPGEKTGWLINMHPAEILDEDKRMI-SAVDYYFIQEDGSRFKVSLPF 99

Query: 85   RPYFYAATKEKMEMDVEAYLRRRYESQIADIEILEKEDLDLKNHLSGLHKSYLKISFDTV 144
            +PYFY ATK+  E +V +YL ++++ ++A +EIL KEDLDL NHL GL ++Y+K++F+TV
Sbjct: 100  KPYFYIATKKNCEREVISYLSKKFQGKVAKLEILPKEDLDLPNHLVGLKRNYIKLAFNTV 159

Query: 145  QQLMDVKKDLLHVVERNQAKFDAAEAYESILTGK-------------REQRPQDFLDCIV 191
              L+ VK+++   V +N+ +  + +AY S+L+                 +   D LD IV
Sbjct: 160  DDLVKVKREIAPAVRKNREREQSNDAYTSMLSSALSGGNVTSVDEDGMSKSISDQLDNIV 219

Query: 192  DLREYDVPYHIRFAIDNDVRCGQWYDVSI--SSTGPLLEKRVDLLQRAEVHVCAFDIETT 249
            D+REYDVPYH+R +ID  +    WY+V    S+  P + +R DL++R +  V AFDIETT
Sbjct: 220  DMREYDVPYHVRVSIDLKIHVAHWYNVRYRGSAYPPEIVRRDDLVERPDPVVLAFDIETT 279

Query: 250  KLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNVNN 309
            KLPLKFPDA+ D IMMISYM+DGQG+LI NRE V E+IED E+TPKPE+EG F V N +N
Sbjct: 280  KLPLKFPDAETDQIMMISYMIDGQGFLITNREIVSENIEDFEFTPKPEYEGPFTVFNEDN 339

Query: 310  EIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDKNQGECR 369
            E  L++ WF H+QE KP I+VTYNGD+FDWPF+E RAA HG  M  E+GFQ D NQGE +
Sbjct: 340  EAALIQRWFDHVQETKPNIFVTYNGDFFDWPFIEVRAALHGLSMHREIGFQKD-NQGEYK 398

Query: 370  AKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQMMASY 429
            A  A H+DC  WVKRDSYLP GS  LKA  KAKLGYDP+E++PE+M R A E+PQ +A+Y
Sbjct: 399  ASQAIHMDCLRWVKRDSYLPVGSHNLKAAAKAKLGYDPVELDPEEMCRMATEEPQTLATY 458

Query: 430  SVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVICPN 489
            SVSDAVATYYLYM YVHPFIF+L TIIPM PDEVLRKGSGTLCE LLMVQA+ AN+I PN
Sbjct: 459  SVSDAVATYYLYMKYVHPFIFALCTIIPMEPDEVLRKGSGTLCEALLMVQAFHANIIFPN 518

Query: 490  KHQSDPEKFYRN-HLLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQLLNNLDRDL 548
            K +    K   + H+L+SETY+GGHVE LESGVFRSD+P  FK++P+A++ LL  ++R +
Sbjct: 519  KQEQIFNKLTDDGHVLDSETYVGGHVEALESGVFRSDIPCRFKMNPAAFDFLLQRVERTM 578

Query: 549  QYAIKVEGKMDLESVSNYDEVKNAIMEKLLRLQEEPIREECPLIYHLDVAAMYPNIILTN 608
            ++A++ E K+ LE V+N++EV + I +KL  L+E P R ECPLIYHLDV AMYPNIILTN
Sbjct: 579  RHAVEEEEKIPLEQVTNFNEVCDEIKKKLTSLKEVPNRIECPLIYHLDVGAMYPNIILTN 638

Query: 609  RLQPPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYYHLKKQIESE----- 663
            RLQP ++V +  C ACDFN+PG TC R++ W WRGEI    RS+++ +++Q+ESE     
Sbjct: 639  RLQPSAMVDEATCAACDFNKPGATCQRRMTWQWRGEIMPASRSEFHRIQQQLESEKFPPL 698

Query: 664  FVDGTNGHLSKSFLDLPKMEQQSRLKDRLKKYCQKAYKRVLDKPVTELRE--AGICMREN 721
            F +G      ++F  L + EQ    K RL  YC+KAYK+     VT+L E    IC REN
Sbjct: 699  FPNGP----PRAFHTLTREEQAKHEKKRLADYCKKAYKKT---HVTKLEERVTTICQREN 751

Query: 722  SFYVDTVRSFRDRRYEYKGLNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHKCI 781
            SFYVDTVR+FRDRRYE+KGL+KVWK KLS A+ SG++ +++  ++M +LY+SLQLAHKCI
Sbjct: 752  SFYVDTVRAFRDRRYEFKGLHKVWKKKLSSAQDSGDAAEVKRCKNMEILYESLQLAHKCI 811

Query: 782  LNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLPGS 841
            LNSFYGYVMRKGARWYSMEMAG+V +TGA II  AR LIE+IG+PLELDTDGIWCVLP +
Sbjct: 812  LNSFYGYVMRKGARWYSMEMAGIVCFTGANIITQARELIEQIGRPLELDTDGIWCVLPNT 871

Query: 842  FPENFTFKTKDLKK-KLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEF 900
            FPENF  KT + KK K+TISYP  MLN+ V    TNDQY  LVDP S TY   +E SI F
Sbjct: 872  FPENFVVKTSNEKKPKVTISYPGAMLNIMVKEGFTNDQYHELVDPASVTYNIRAENSIFF 931

Query: 901  EVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFD 960
            EVDGPY AMILPASKEEG  +KKRYAVFN+DG+LAELKGFE+KRRGEL+LIK+FQ+ +F+
Sbjct: 932  EVDGPYLAMILPASKEEGKKLKKRYAVFNEDGSLAELKGFEVKRRGELQLIKIFQSSVFE 991

Query: 961  KFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLADYGEQKS 1020
             FL G+T+EE Y++VA VA+ WLD+L ++  ++ D+EL D ISE+ +MS+ L DYGEQKS
Sbjct: 992  AFLKGTTLEEVYASVAKVADYWLDVLYSKAANMPDAELFDLISENRSMSRKLEDYGEQKS 1051

Query: 1021 CAVTTARRLSDFLGDTMVKDKGLRCQYIVACEPQGTPVSERAVPVAIFETDAEIMKFYLR 1080
             +++TA+RL++FLGD MVKD GL C+Y+++ +P+G+PV+ERA+P+AIF+ +  + K +LR
Sbjct: 1052 TSISTAKRLAEFLGDQMVKDAGLSCRYVISRKPEGSPVTERAIPLAIFQAEPSVKKHFLR 1111

Query: 1081 KWCKTSS--DVGIRSIVDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLYKKV 1138
            KW K  S  D+ IRSI+DWSYY +RL SAIQKIITIPAA+Q+V NPVPRV HPDWL+KK+
Sbjct: 1112 KWLKMPSLHDMDIRSILDWSYYIERLGSAIQKIITIPAALQQVKNPVPRVRHPDWLHKKL 1171

Query: 1139 REKEDKFRQRKLVDIFSSLKKDDFLNKTCNAETNLMDENVEDLEDFPKKRRNSVNGPRPI 1198
             EK D ++Q+K+ ++F+S  K    ++   A          D+EDF          PRP+
Sbjct: 1172 LEKNDIYKQKKISELFTSEGKRQIAHQPLEAGP------AADIEDFGMP-------PRPL 1218

Query: 1199 VRCFEVNNEQKTVKTTD--QVDSLRQQLEPSEVSDQQPSSQNAIDTENIDRIVDYKGWLE 1256
                 ++ ++K     D  QV+S   +L  S      P        E      +++ WL 
Sbjct: 1219 QPAILISTKRKRASQGDDSQVESQDLELTQSWREILGPPPPKGKTRE------EHQVWLR 1272

Query: 1257 LKKRKWKDNLDRRKKQKLGSLRASHQANGVSESLGDMINHKEAQRRTGVGSYFRRQETAM 1316
              K+KW+  L +RK++K        +A  V    G +I        TG+GS+ RR   ++
Sbjct: 1273 YHKKKWELQLKQRKERKKRRRLLDGEAQPVG---GGVIRGGPI---TGLGSFLRRTARSI 1326

Query: 1317 TRCHWQIIQLVPSSQSGVFLAWVVVEGIMVRIPITVPRLFYLNSKDPIVEKFPG-RRVNK 1375
                WQI+Q+  +S  G++  W V+   +  + + +PR+FY+N K P  E+    ++VN+
Sbjct: 1327 LDMPWQIVQIAETSHPGLYKLWAVIGNDLHCMKLNIPRVFYVNQKVPKQEEGATYKKVNR 1386

Query: 1376 TLPHGRRSFNLIEVMIDEDQFRKESKKLAALLADPEVE 1413
             LP     + L E  + ED +++   ++ A L+ P++E
Sbjct: 1387 MLPRSNMVYYLYEYSVPEDMYQEHINEINADLSAPDIE 1424



 Score =  321 bits (823), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 196/613 (31%), Positives = 308/613 (50%), Gaps = 77/613 (12%)

Query: 1442 LARYAHILWISDDGVPDLGGTSEEDECFA---DEVHQPVLTYPGAYRKVSVELKIHHLSV 1498
            L ++ H+LW+S    PDLGG   +D       D+     +   G Y    VEL +  L+V
Sbjct: 1677 LRKHNHLLWLSPTSRPDLGGKEADDSRLVMENDDRGSVEINAQGCYSTACVELDLQSLAV 1736

Query: 1499 NALLKSNQVNEMEGGGLFG--FD-------QDMNSGPYN-NELCGFDETTSSAPAFRVVK 1548
            N +L+S  VN+MEGG   G  FD       +DM SG    + L  +DET   +  FR++K
Sbjct: 1737 NTILQSQHVNDMEGGASLGVSFDVIQQASLEDMMSGNQGASALASYDETALCSNTFRILK 1796

Query: 1549 QLIQRCLTDAVTSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEF 1608
             ++   + +     NV+AD  + H YRWL SP S L+DP LHR LH +M+KVF  L+AEF
Sbjct: 1797 SMVVGWVREITQYHNVYADNQVMHFYRWLRSPSSLLYDPALHRTLHNMMKKVFLQLVAEF 1856

Query: 1609 RKLGATIIFANFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLF 1668
            ++LG+T+++ NF+++I+ T K  +  A  Y + +  ++ ++E+F  + +     W  LL+
Sbjct: 1857 KRLGSTVVYGNFNRIILCTKKRRIDDAIGYVEYITNSIHSKEIFHSLSISFSRCWEFLLW 1916

Query: 1669 MDQYNYGGIPARADESL--------------------------------------DDDSQ 1690
            MD  NYGG+  +   S+                                       D+ +
Sbjct: 1917 MDPANYGGVKGKLPSSVMYGEEGAQQKKTRQEEGDEDGSEDEDEENAEEEDGDGETDEVE 1976

Query: 1691 VDIVSSWNIAEYLPK--EIQDHFVLVVSEFMYIPWKHAQKLAASRASLQEGSSCTPSITV 1748
              I S+WNI +YLP+    Q +F+++VS ++   + H+ K    R     G   TP    
Sbjct: 1977 DLIESNWNIMQYLPQTASCQKYFLMIVSAYIAAVY-HSMKEELRR----NGPGATPVKRR 2031

Query: 1749 AAAENFESHI---------VQYVKGEISSYFTGKLLSIVRDAIHHMKKMNNDQHNSPGVM 1799
              ++  +  I         + + +  +SS  T  + +I +     +    +  H S    
Sbjct: 2032 GNSQASQQAIGDLSALPGMISFSQEYVSSELTQNIFTITQKIQKKVTGTRSVTHTSEMFP 2091

Query: 1800 QTAANIHKVDAP-LEFIKHVCAAFALDQNVQHDVLVMRKNLLKYVRVREFAPEAEFRDPC 1858
                +   ++ P LEFIK+VC   +LD N+ + V  ++++LL+ V V EF+ EA+FRDPC
Sbjct: 2092 ILPGSHLPLNNPALEFIKYVCQVLSLDANIVNQVNKLKRDLLRLVDVGEFSDEAQFRDPC 2151

Query: 1859 PSFILPNVICSYCNDCRDLDLCRDMALLAQD------WHCAMPQCGQPYDREVMENALLQ 1912
             S+ILP VIC +CN CRDLDLC+D + +AQD      W C+   C   YD   +E AL++
Sbjct: 2152 NSYILPEVICHHCNFCRDLDLCKDPS-VAQDGSVLPQWFCS--NCQAQYDTNSIEMALVE 2208

Query: 1913 IVRQRERLYHLQDLVCIRCNQVKAAHLAEQCACAGSFRCKEDASDFRSKMQIFLNIANRQ 1972
             ++++   Y LQDLVC +C  VK   +   C CAG F     A  F  ++ +F NIA+  
Sbjct: 2209 ALQKKLMSYTLQDLVCSKCKGVKETSMPLYCKCAGDFDLTFSAKSFSEQIAVFRNIASHY 2268

Query: 1973 GFQLLQECTSWIL 1985
                L+E   W+L
Sbjct: 2269 NMSFLEETLGWLL 2281


>gi|397487078|ref|XP_003814638.1| PREDICTED: DNA polymerase epsilon catalytic subunit A isoform 1 [Pan
            paniscus]
          Length = 2286

 Score = 1443 bits (3736), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 740/1455 (50%), Positives = 995/1455 (68%), Gaps = 82/1455 (5%)

Query: 3    RRRWD--------RQDGRRTKKQKLIR----SAEEELEAKLGYDLFSEGDKRLGWLLTFA 50
            RRR D        R DG  +    L R       ++++ + G++   E  ++ GWL+   
Sbjct: 8    RRRADPGADGEASRDDGATSSVSALKRLERSQWTDKMDLRFGFERLKEPGEKTGWLINMH 67

Query: 51   SSSLEDEDTRKVYSCIDLYFVSQDGSTFKSKYKFRPYFYAATKEKMEMDVEAYLRRRYES 110
             + + DED R + S +D YF+  DGS FK    ++PYFY AT++  E +V ++L ++++ 
Sbjct: 68   PTEILDEDKR-LGSAVDYYFIQDDGSRFKVALPYKPYFYIATRKGCEREVSSFLSKKFQG 126

Query: 111  QIADIEILEKEDLDLKNHLSGLHKSYLKISFDTVQQLMDVKKDLLHVVERNQAKFDAAEA 170
            +IA +E + KEDLDL NHL GL ++Y+++SF TV+ L+ V+K++   V++N+ +  A++A
Sbjct: 127  KIAKVETVPKEDLDLPNHLVGLKRNYIRLSFHTVEDLVKVRKEISPAVKKNREQDHASDA 186

Query: 171  YESILTG------------KREQRPQDFLDCIVDLREYDVPYHIRFAIDNDVRCGQWYDV 218
            Y ++L+             +  ++  D LD IVD+REYDVPYHIR +ID  +    WY+V
Sbjct: 187  YTALLSSVLQRGGVITDEEETSKKIADQLDNIVDMREYDVPYHIRLSIDLKIHVAHWYNV 246

Query: 219  SISSTGPLLE--KRVDLLQRAEVHVCAFDIETTKLPLKFPDADYDIIMMISYMLDGQGYL 276
                    +E  +R DL++R +  V AFDIETTKLPLKFPDA+ D IMMISYM+DGQGYL
Sbjct: 247  RYRGNAFPVEITRRDDLVERPDPVVLAFDIETTKLPLKFPDAETDQIMMISYMIDGQGYL 306

Query: 277  IINRECVGEDIEDLEYTPKPEFEGYFKVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDY 336
            I NRE V EDIED E+TPKPE+EG F V N  +E  L++ WF H+QE KP I VTYNGD+
Sbjct: 307  ITNREIVSEDIEDFEFTPKPEYEGPFCVFNEPDEAHLIQRWFEHVQETKPTIMVTYNGDF 366

Query: 337  FDWPFLETRAAHHGFKMSEELGFQCDKNQGECRAKFACHLDCFAWVKRDSYLPQGSQGLK 396
            FDWPF+E RAA HG  M +E+GFQ D +QGE +A    H+DC  WVKRDSYLP GS  LK
Sbjct: 367  FDWPFVEARAAVHGLSMQQEIGFQKD-SQGEYKAPQCIHMDCLRWVKRDSYLPVGSHNLK 425

Query: 397  AVTKAKLGYDPLEVNPEDMVRFAKEKPQMMASYSVSDAVATYYLYMTYVHPFIFSLATII 456
            A  KAKLGYDP+E++PEDM R A E+PQ +A+YSVSDAVATYYLYM YVHPFIF+L TII
Sbjct: 426  AAAKAKLGYDPVELDPEDMCRMATEQPQTLATYSVSDAVATYYLYMKYVHPFIFALCTII 485

Query: 457  PMSPDEVLRKGSGTLCEMLLMVQAYKANVICPNKHQSDPEKFYRN-HLLESETYIGGHVE 515
            PM PDEVLRKGSGTLCE LLMVQA+ AN+I PNK + +  K   + H+L+SETY+GGHVE
Sbjct: 486  PMEPDEVLRKGSGTLCEALLMVQAFHANIIFPNKQEQEFNKLTDDGHVLDSETYVGGHVE 545

Query: 516  CLESGVFRSDLPTSFKLDPSAYEQLLNNLDRDLQYAIKVEGKMDLESVSNYDEVKNAIME 575
             LESGVFRSD+P  F+++P+A++ LL  +++ L++A++ E K+ +E V+N++EV + I  
Sbjct: 546  ALESGVFRSDIPCRFRMNPAAFDFLLQRVEKTLRHALEEEEKVPVEQVTNFEEVCDEIKS 605

Query: 576  KLLRLQEEPIREECPLIYHLDVAAMYPNIILTNRLQPPSIVTDEVCTACDFNRPGKTCLR 635
            KL  L++ P R ECPLIYHLDV AMYPNIILTNRLQP ++V +  C ACDFN+PG  C R
Sbjct: 606  KLASLKDVPSRIECPLIYHLDVGAMYPNIILTNRLQPSAMVDEATCAACDFNKPGANCQR 665

Query: 636  KLEWVWRGEIFMGKRSDYYHLKKQIESE-----FVDGTNGHLSKSFLDLPKMEQQSRLKD 690
            K+ W WRGE     RS+Y+ ++ Q+ESE     F +G     +++F +L + EQ    K 
Sbjct: 666  KMAWQWRGEFMPASRSEYHRIQHQLESEKFPPLFPEGP----ARAFHELSREEQAKYEKR 721

Query: 691  RLKKYCQKAYKRVLDKPVTELREAGICMRENSFYVDTVRSFRDRRYEYKGLNKVWKGKLS 750
            RL  YC+KAYK++    V E R   IC RENSFYVDTVR+FRDRRYE+KGL+KVWK KLS
Sbjct: 722  RLADYCRKAYKKIHITKVEE-RLTTICQRENSFYVDTVRAFRDRRYEFKGLHKVWKKKLS 780

Query: 751  EAKASGNSIKIQEAQDMVVLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGA 810
             A   G++ +++  ++M VLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAG+V +TGA
Sbjct: 781  AAVEVGDAAEVKRCKNMEVLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGIVCFTGA 840

Query: 811  KIIQNARLLIEKIGKPLELDTDGIWCVLPGSFPENFTFKTKDLKK-KLTISYPCVMLNVD 869
             II  AR LIE+IG+PLELDTDGIWCVLP SFPENF FKT ++KK K+TISYP  MLN+ 
Sbjct: 841  NIITQARELIEQIGRPLELDTDGIWCVLPNSFPENFVFKTTNVKKPKVTISYPGAMLNIM 900

Query: 870  VARNNTNDQYQTLVDPVSKTYETHSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFN 929
            V    TNDQYQ L +P S TY T SE SI FEVDGPY AMILPASKEEG  +KKRYAVFN
Sbjct: 901  VKEGFTNDQYQELAEPSSLTYVTRSENSIFFEVDGPYLAMILPASKEEGKKLKKRYAVFN 960

Query: 930  DDGTLAELKGFEIKRRGELKLIKVFQAELFDKFLHGSTIEECYSAVAAVANRWLDLLDNQ 989
            +DG+LAELKGFE+KRRGEL+LIK+FQ+ +F+ FL GST+EE Y +VA VA+ WLD+L ++
Sbjct: 961  EDGSLAELKGFEVKRRGELQLIKIFQSSVFEAFLKGSTLEEVYGSVAKVADYWLDVLYSK 1020

Query: 990  GKDIADSELIDYISESSTMSKSLADYGEQKSCAVTTARRLSDFLGDTMVKDKGLRCQYIV 1049
              ++ DSEL + ISE+ +MS+ L DYGEQKS +++TA+RL++FLGD MVKD GL C+YI+
Sbjct: 1021 AANMPDSELFELISENRSMSRKLEDYGEQKSTSISTAKRLAEFLGDQMVKDAGLSCRYII 1080

Query: 1050 ACEPQGTPVSERAVPVAIFETDAEIMKFYLRKWCKTSS--DVGIRSIVDWSYYKQRLSSA 1107
            + +P+G+PV+ERA+P+AIF+ +  + K +LRKW K+SS  D  IR+I+DW YY +RL SA
Sbjct: 1081 SRKPEGSPVTERAIPLAIFQAEPTVRKHFLRKWLKSSSLQDFDIRAILDWDYYIERLGSA 1140

Query: 1108 IQKIITIPAAMQKVSNPVPRVVHPDWLYKKVREKEDKFRQRKLVDIFSSLKKDDFLNKTC 1167
            IQKIITIPAA+Q+V NPVPRV HPDWL+KK+ EK D ++Q+K+ ++F+   +        
Sbjct: 1141 IQKIITIPAALQQVKNPVPRVKHPDWLHKKLLEKNDVYKQKKISELFTLEGRRQV--TMA 1198

Query: 1168 NAETNLMDENVEDLEDFPKKRRNSVNGPRPIVRCFEVNNEQKTVKTTDQVDSLRQQLEPS 1227
             A  +    +  D+EDF       V  P P      V  ++K V    Q +S  Q L P+
Sbjct: 1199 EASEDSPRPSAPDMEDF-----GLVKLPHPAA---PVTVKRKRVLWESQEES--QDLTPT 1248

Query: 1228 ----EVSDQQPSSQNAIDTENIDRIVDYKGWLELKKRKW----KDNLDRRKKQKLGSLRA 1279
                E+  Q P    A+ T   + +V    WL   K+KW    +  L RRK+Q+L S   
Sbjct: 1249 VPWQEILGQPP----ALGTTQEEWLV----WLRFHKKKWQLQARQRLARRKRQRLESAEG 1300

Query: 1280 SHQANGVSESLGDMINHKEAQRRTGVGSYFRRQETAMTRCHWQIIQLVPSSQSGVFLAWV 1339
              +   + +              TG+GS+ RR   ++    WQI+Q+  +SQ+G+F  W 
Sbjct: 1301 VLRPGAIRDGPA-----------TGLGSFLRRTARSILDLPWQIVQISETSQAGLFRLWA 1349

Query: 1340 VVEGIMVRIPITVPRLFYLNSKDPIVEKFPG-RRVNKTLPHGRRSFNLIEVMIDEDQFRK 1398
            +V   +  I +++PR+FY+N +   VE+    R+VN+ LP     +NL E  + ED +++
Sbjct: 1350 LVGSDLHCIRLSIPRVFYVNQRVAKVEEGASYRKVNRVLPRSNVVYNLYEYSVPEDMYQE 1409

Query: 1399 ESKKLAALLADPEVE 1413
               ++ A L+ P++E
Sbjct: 1410 HINEINAELSAPDIE 1424



 Score =  311 bits (798), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 190/609 (31%), Positives = 305/609 (50%), Gaps = 70/609 (11%)

Query: 1442 LARYAHILWISDDGVPDLGGTSEEDECFA---DEVHQPVLTYPGAYRKVSVELKIHHLSV 1498
            L R+ H+LW+S    PDLGG   +D       D+     +   G Y  V VEL + +L+V
Sbjct: 1677 LQRHNHLLWLSPTARPDLGGKEADDNYLVMEFDDQATVEINSSGCYSTVCVELDLQNLAV 1736

Query: 1499 NALLKSNQVNEMEGGGLFGFDQD----------MNSGPYNNELCGFDETTSSAPAFRVVK 1548
            N +L+S+ VN+MEG    G   D          +  G   +    +DET   +  FR++K
Sbjct: 1737 NTILQSHHVNDMEGADSMGISFDVIQQASLEDMITGGQAASAPASYDETALCSNTFRILK 1796

Query: 1549 QLIQRCLTDAVTSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEF 1608
             ++   + +     N++AD  + H YRWL SP S LHDP LHR LH +M+K+F  L+AEF
Sbjct: 1797 SMVVGWVKEITQYHNIYADNQVMHFYRWLRSPSSLLHDPALHRTLHNMMKKLFLQLIAEF 1856

Query: 1609 RKLGATIIFANFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLF 1668
            ++LG+++I+ANF+++I+ T K  +  A AY + +  ++ ++E+F  + +     W  LL+
Sbjct: 1857 KRLGSSVIYANFNRIILCTKKRRVEDAIAYVEYITSSIHSKEIFHSLTISFSRCWEFLLW 1916

Query: 1669 MDQYNYGGIPARADESLD---DDSQV-------------------------------DIV 1694
            MD  NYGGI  +    +     DSQ                                D++
Sbjct: 1917 MDPSNYGGIKGKVSSRIHCGLQDSQKAGGAEDEQENEDDEEERDGEEEEEAEESNVEDLL 1976

Query: 1695 -SSWNIAEYLPK--EIQDHFVLVVSEFMYIPWKHAQKLAASRASLQEGSSCTPSITVAAA 1751
             ++WNI ++LP+    Q++F+++VS ++   + H  K    R++   GS+       +  
Sbjct: 1977 ENNWNILQFLPQAASCQNYFLMIVSAYIVAVY-HCMKDGLRRSA--PGSTPVRRRGASQL 2033

Query: 1752 ENFESHIVQYVKGEIS---SYFTGKLLSIVRDAIHHMKKMNNDQHNSPGVMQT-----AA 1803
                   V  + G I+    Y   +L          ++K      NS  + +       +
Sbjct: 2034 SQEAEGAVGALPGMITFSQDYVANELTQSFFTITQKIQKKVTGSRNSTELSEMFPVLPGS 2093

Query: 1804 NIHKVDAPLEFIKHVCAAFALDQNVQHDVLVMRKNLLKYVRVREFAPEAEFRDPCPSFIL 1863
            ++   +  LEFIK+VC   +LD N+ + V  + ++LL+ V V EF+ EA+FRDPC S++L
Sbjct: 2094 HLLLNNPALEFIKYVCKVLSLDTNITNQVNKLNRDLLRLVDVGEFSEEAQFRDPCRSYVL 2153

Query: 1864 PNVICSYCNDCRDLDLCRDM------ALLAQDWHCAMPQCGQPYDREVMENALLQIVRQR 1917
            P VIC  CN CRDLDLC+D       A+L Q W C+   C  PYD   +E  L+++++++
Sbjct: 2154 PEVICRSCNFCRDLDLCKDSSFSEDGAVLPQ-WLCS--NCQAPYDSSAIEMTLVEVLQKK 2210

Query: 1918 ERLYHLQDLVCIRCNQVKAAHLAEQCACAGSFRCKEDASDFRSKMQIFLNIANRQGFQLL 1977
               + LQDLVC++C  VK   +   C+CAG F        F  ++ IF NIA       L
Sbjct: 2211 LMAFTLQDLVCLKCRGVKETSMPVYCSCAGDFALTIHTQVFMEQIGIFRNIAQHYSMSYL 2270

Query: 1978 QECTSWILE 1986
             E   W+L+
Sbjct: 2271 LETLEWLLQ 2279


>gi|62198237|ref|NP_006222.2| DNA polymerase epsilon catalytic subunit A [Homo sapiens]
 gi|116241339|sp|Q07864.5|DPOE1_HUMAN RecName: Full=DNA polymerase epsilon catalytic subunit A; AltName:
            Full=DNA polymerase II subunit A
 gi|225000184|gb|AAI72436.1| Polymerase (DNA directed), epsilon [synthetic construct]
          Length = 2286

 Score = 1443 bits (3736), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 739/1455 (50%), Positives = 994/1455 (68%), Gaps = 82/1455 (5%)

Query: 3    RRRWD--------RQDGRRTKKQKLIR----SAEEELEAKLGYDLFSEGDKRLGWLLTFA 50
            RRR D        R DG  +    L R       ++++ + G++   E  ++ GWL+   
Sbjct: 8    RRRADPGADGEASRDDGATSSVSALKRLERSQWTDKMDLRFGFERLKEPGEKTGWLINMH 67

Query: 51   SSSLEDEDTRKVYSCIDLYFVSQDGSTFKSKYKFRPYFYAATKEKMEMDVEAYLRRRYES 110
             + + DED R + S +D YF+  DGS FK    ++PYFY AT++  E +V ++L ++++ 
Sbjct: 68   PTEILDEDKR-LGSAVDYYFIQDDGSRFKVALPYKPYFYIATRKGCEREVSSFLSKKFQG 126

Query: 111  QIADIEILEKEDLDLKNHLSGLHKSYLKISFDTVQQLMDVKKDLLHVVERNQAKFDAAEA 170
            +IA +E + KEDLDL NHL GL ++Y+++SF TV+ L+ V+K++   V++N+ +  A++A
Sbjct: 127  KIAKVETVPKEDLDLPNHLVGLKRNYIRLSFHTVEDLVKVRKEISPAVKKNREQDHASDA 186

Query: 171  YESILTG------------KREQRPQDFLDCIVDLREYDVPYHIRFAIDNDVRCGQWYDV 218
            Y ++L+             +  ++  D LD IVD+REYDVPYHIR +ID  +    WY+V
Sbjct: 187  YTALLSSVLQRGGVITDEEETSKKIADQLDNIVDMREYDVPYHIRLSIDLKIHVAHWYNV 246

Query: 219  SISSTGPLLE--KRVDLLQRAEVHVCAFDIETTKLPLKFPDADYDIIMMISYMLDGQGYL 276
                    +E  +R DL++R +  V AFDIETTKLPLKFPDA+ D IMMISYM+DGQGYL
Sbjct: 247  RYRGNAFPVEITRRDDLVERPDPVVLAFDIETTKLPLKFPDAETDQIMMISYMIDGQGYL 306

Query: 277  IINRECVGEDIEDLEYTPKPEFEGYFKVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDY 336
            I NRE V EDIED E+TPKPE+EG F V N  +E  L++ WF H+QE KP I VTYNGD+
Sbjct: 307  ITNREIVSEDIEDFEFTPKPEYEGPFCVFNEPDEAHLIQRWFEHVQETKPTIMVTYNGDF 366

Query: 337  FDWPFLETRAAHHGFKMSEELGFQCDKNQGECRAKFACHLDCFAWVKRDSYLPQGSQGLK 396
            FDWPF+E RAA HG  M +E+GFQ D +QGE +A    H+DC  WVKRDSYLP GS  LK
Sbjct: 367  FDWPFVEARAAVHGLSMQQEIGFQKD-SQGEYKAPQCIHMDCLRWVKRDSYLPVGSHNLK 425

Query: 397  AVTKAKLGYDPLEVNPEDMVRFAKEKPQMMASYSVSDAVATYYLYMTYVHPFIFSLATII 456
            A  KAKLGYDP+E++PEDM R A E+PQ +A+YSVSDAVATYYLYM YVHPFIF+L TII
Sbjct: 426  AAAKAKLGYDPVELDPEDMCRMATEQPQTLATYSVSDAVATYYLYMKYVHPFIFALCTII 485

Query: 457  PMSPDEVLRKGSGTLCEMLLMVQAYKANVICPNKHQSDPEKFYRN-HLLESETYIGGHVE 515
            PM PDEVLRKGSGTLCE LLMVQA+ AN+I PNK + +  K   + H+L+SETY+GGHVE
Sbjct: 486  PMEPDEVLRKGSGTLCEALLMVQAFHANIIFPNKQEQEFNKLTDDGHVLDSETYVGGHVE 545

Query: 516  CLESGVFRSDLPTSFKLDPSAYEQLLNNLDRDLQYAIKVEGKMDLESVSNYDEVKNAIME 575
             LESGVFRSD+P  F+++P+A++ LL  +++ L++A++ E K+ +E V+N++EV + I  
Sbjct: 546  ALESGVFRSDIPCRFRMNPAAFDFLLQRVEKTLRHALEEEEKVPVEQVTNFEEVCDEIKS 605

Query: 576  KLLRLQEEPIREECPLIYHLDVAAMYPNIILTNRLQPPSIVTDEVCTACDFNRPGKTCLR 635
            KL  L++ P R ECPLIYHLDV AMYPNIILTNRLQP ++V +  C ACDFN+PG  C R
Sbjct: 606  KLASLKDVPSRIECPLIYHLDVGAMYPNIILTNRLQPSAMVDEATCAACDFNKPGANCQR 665

Query: 636  KLEWVWRGEIFMGKRSDYYHLKKQIESE-----FVDGTNGHLSKSFLDLPKMEQQSRLKD 690
            K+ W WRGE     RS+Y+ ++ Q+ESE     F +G     +++F +L + EQ    K 
Sbjct: 666  KMAWQWRGEFMPASRSEYHRIQHQLESEKFPPLFPEGP----ARAFHELSREEQAKYEKR 721

Query: 691  RLKKYCQKAYKRVLDKPVTELREAGICMRENSFYVDTVRSFRDRRYEYKGLNKVWKGKLS 750
            RL  YC+KAYK++    V E R   IC RENSFYVDTVR+FRDRRYE+KGL+KVWK KLS
Sbjct: 722  RLADYCRKAYKKIHITKVEE-RLTTICQRENSFYVDTVRAFRDRRYEFKGLHKVWKKKLS 780

Query: 751  EAKASGNSIKIQEAQDMVVLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGA 810
             A   G++ +++  ++M VLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAG+V +TGA
Sbjct: 781  AAVEVGDAAEVKRCKNMEVLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGIVCFTGA 840

Query: 811  KIIQNARLLIEKIGKPLELDTDGIWCVLPGSFPENFTFKTKDLKK-KLTISYPCVMLNVD 869
             II  AR LIE+IG+PLELDTDGIWCVLP SFPENF FKT ++KK K+TISYP  MLN+ 
Sbjct: 841  NIITQARELIEQIGRPLELDTDGIWCVLPNSFPENFVFKTTNVKKPKVTISYPGAMLNIM 900

Query: 870  VARNNTNDQYQTLVDPVSKTYETHSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFN 929
            V    TNDQYQ L +P S TY T SE SI FEVDGPY AMILPASKEEG  +KKRYAVFN
Sbjct: 901  VKEGFTNDQYQELAEPSSLTYVTRSENSIFFEVDGPYLAMILPASKEEGKKLKKRYAVFN 960

Query: 930  DDGTLAELKGFEIKRRGELKLIKVFQAELFDKFLHGSTIEECYSAVAAVANRWLDLLDNQ 989
            +DG+LAELKGFE+KRRGEL+LIK+FQ+ +F+ FL GST+EE Y +VA VA+ WLD+L ++
Sbjct: 961  EDGSLAELKGFEVKRRGELQLIKIFQSSVFEAFLKGSTLEEVYGSVAKVADYWLDVLYSK 1020

Query: 990  GKDIADSELIDYISESSTMSKSLADYGEQKSCAVTTARRLSDFLGDTMVKDKGLRCQYIV 1049
              ++ DSEL + ISE+ +MS+ L DYGEQKS +++TA+RL++FLGD MVKD GL C+YI+
Sbjct: 1021 AANMPDSELFELISENRSMSRKLEDYGEQKSTSISTAKRLAEFLGDQMVKDAGLSCRYII 1080

Query: 1050 ACEPQGTPVSERAVPVAIFETDAEIMKFYLRKWCKTSS--DVGIRSIVDWSYYKQRLSSA 1107
            + +P+G+PV+ERA+P+AIF+ +  + K +LRKW K+SS  D  IR+I+DW YY +RL SA
Sbjct: 1081 SRKPEGSPVTERAIPLAIFQAEPTVRKHFLRKWLKSSSLQDFDIRAILDWDYYIERLGSA 1140

Query: 1108 IQKIITIPAAMQKVSNPVPRVVHPDWLYKKVREKEDKFRQRKLVDIFSSLKKDDFLNKTC 1167
            IQKIITIPAA+Q+V NPVPRV HPDWL+KK+ EK D ++Q+K+ ++F+   +        
Sbjct: 1141 IQKIITIPAALQQVKNPVPRVKHPDWLHKKLLEKNDVYKQKKISELFTLEGRRQV--TMA 1198

Query: 1168 NAETNLMDENVEDLEDFPKKRRNSVNGPRPIVRCFEVNNEQKTVKTTDQVDSLRQQLEPS 1227
             A  +    +  D+EDF       V  P P      V  ++K V    Q +S  Q L P+
Sbjct: 1199 EASEDSPRPSAPDMEDF-----GLVKLPHPAA---PVTVKRKRVLWESQEES--QDLTPT 1248

Query: 1228 ----EVSDQQPSSQNAIDTENIDRIVDYKGWLELKKRKW----KDNLDRRKKQKLGSLRA 1279
                E+  Q P    A+ T   + +V    WL   K+KW    +  L RRK+Q+L S   
Sbjct: 1249 VPWQEILGQPP----ALGTSQEEWLV----WLRFHKKKWQLQARQRLARRKRQRLESAEG 1300

Query: 1280 SHQANGVSESLGDMINHKEAQRRTGVGSYFRRQETAMTRCHWQIIQLVPSSQSGVFLAWV 1339
              +   + +              TG+GS+ RR   ++    WQI+Q+  +SQ+G+F  W 
Sbjct: 1301 VLRPGAIRDGPA-----------TGLGSFLRRTARSILDLPWQIVQISETSQAGLFRLWA 1349

Query: 1340 VVEGIMVRIPITVPRLFYLNSKDPIVEKFPG-RRVNKTLPHGRRSFNLIEVMIDEDQFRK 1398
            +V   +  I +++PR+FY+N +    E+    R+VN+ LP     +NL E  + ED +++
Sbjct: 1350 LVGSDLHCIRLSIPRVFYVNQRVAKAEEGASYRKVNRVLPRSNMVYNLYEYSVPEDMYQE 1409

Query: 1399 ESKKLAALLADPEVE 1413
               ++ A L+ P++E
Sbjct: 1410 HINEINAELSAPDIE 1424



 Score =  318 bits (815), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 192/609 (31%), Positives = 306/609 (50%), Gaps = 70/609 (11%)

Query: 1442 LARYAHILWISDDGVPDLGGTSEEDECFA---DEVHQPVLTYPGAYRKVSVELKIHHLSV 1498
            L R+ H+LW+S    PDLGG   +D C     D+     +   G Y  V VEL + +L+V
Sbjct: 1677 LQRHNHLLWLSPTARPDLGGKEADDNCLVMEFDDQATVEINSSGCYSTVCVELDLQNLAV 1736

Query: 1499 NALLKSNQVNEMEGGGLFGFDQD----------MNSGPYNNELCGFDETTSSAPAFRVVK 1548
            N +L+S+ VN+MEG    G   D          +  G   +    +DET   +  FR++K
Sbjct: 1737 NTILQSHHVNDMEGADSMGISFDVIQQASLEDMITGGQAASAPASYDETALCSNTFRILK 1796

Query: 1549 QLIQRCLTDAVTSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEF 1608
             ++   + +     N++AD  + H YRWL SP S LHDP LHR LH +M+K+F  L+AEF
Sbjct: 1797 SMVVGWVKEITQYHNIYADNQVMHFYRWLRSPSSLLHDPALHRTLHNMMKKLFLQLIAEF 1856

Query: 1609 RKLGATIIFANFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLF 1668
            ++LG+++I+ANF+++I+ T K  +  A AY + +  ++ ++E F  + +     W  LL+
Sbjct: 1857 KRLGSSVIYANFNRIILCTKKRRVEDAIAYVEYITSSIHSKETFHSLTISFSRCWEFLLW 1916

Query: 1669 MDQYNYGGIPARADESLD---DDSQV-------------------------------DIV 1694
            MD  NYGGI  +    +     DSQ                                D++
Sbjct: 1917 MDPSNYGGIKGKVSSRIHCGLQDSQKAGGAEDEQENEDDEEERDGEEEEEAEESNVEDLL 1976

Query: 1695 -SSWNIAEYLPK--EIQDHFVLVVSEFMYIPWKHAQKLAASRASLQEGSSCTPSITVAAA 1751
             ++WNI ++LP+    Q++F+++VS ++   + H  K    R++   GS+       +  
Sbjct: 1977 ENNWNILQFLPQAASCQNYFLMIVSAYIVAVY-HCMKDGLRRSA--PGSTPVRRRGASQL 2033

Query: 1752 ENFESHIVQYVKGEIS---SYFTGKLLSIVRDAIHHMKKMNNDQHNSPGVMQT-----AA 1803
                   V  + G I+    Y   +L          ++K      NS  + +       +
Sbjct: 2034 SQEAEGAVGALPGMITFSQDYVANELTQSFFTITQKIQKKVTGSRNSTELSEMFPVLPGS 2093

Query: 1804 NIHKVDAPLEFIKHVCAAFALDQNVQHDVLVMRKNLLKYVRVREFAPEAEFRDPCPSFIL 1863
            ++   +  LEFIK+VC   +LD N+ + V  + ++LL+ V V EF+ EA+FRDPC S++L
Sbjct: 2094 HLLLNNPALEFIKYVCKVLSLDTNITNQVNKLNRDLLRLVDVGEFSEEAQFRDPCRSYVL 2153

Query: 1864 PNVICSYCNDCRDLDLCRDM------ALLAQDWHCAMPQCGQPYDREVMENALLQIVRQR 1917
            P VIC  CN CRDLDLC+D       A+L Q W C+   C  PYD   +E  L+++++++
Sbjct: 2154 PEVICRSCNFCRDLDLCKDSSFSEDGAVLPQ-WLCS--NCQAPYDSSAIEMTLVEVLQKK 2210

Query: 1918 ERLYHLQDLVCIRCNQVKAAHLAEQCACAGSFRCKEDASDFRSKMQIFLNIANRQGFQLL 1977
               + LQDLVC++C  VK   +   C+CAG F        F  ++ IF NIA   G   L
Sbjct: 2211 LMAFTLQDLVCLKCRGVKETSMPVYCSCAGDFALTIHTQVFMEQIGIFRNIAQHYGMSYL 2270

Query: 1978 QECTSWILE 1986
             E   W+L+
Sbjct: 2271 LETLEWLLQ 2279


>gi|426247658|ref|XP_004017596.1| PREDICTED: DNA polymerase epsilon catalytic subunit A [Ovis aries]
          Length = 2284

 Score = 1443 bits (3735), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 727/1437 (50%), Positives = 987/1437 (68%), Gaps = 64/1437 (4%)

Query: 8    RQDGRRTKKQKLIR----SAEEELEAKLGYDLFSEGDKRLGWLLTFASSSLEDEDTRKVY 63
            R DG  +    L R       ++++ + G++   E  ++ GWL+    + + DED R V 
Sbjct: 20   RDDGSSSSVSALKRLERSQWTDKMDLRFGFERLKEPGEKTGWLINMHPTEILDEDKRLV- 78

Query: 64   SCIDLYFVSQDGSTFKSKYKFRPYFYAATKEKMEMDVEAYLRRRYESQIADIEILEKEDL 123
            S +D YF+  DGS FK    ++PYFY AT++  E +V ++L ++++ +IA +E + KEDL
Sbjct: 79   SAVDYYFIQDDGSRFKVALPYKPYFYIATRKGCEREVSSFLSKKFQGKIAKVETVPKEDL 138

Query: 124  DLKNHLSGLHKSYLKISFDTVQQLMDVKKDLLHVVERNQAKFDAAEAYESILTG------ 177
            DL NHL GL ++Y+K+SF+TV+ L+ V+K++   V++N+ +  A++AY ++L+       
Sbjct: 139  DLPNHLVGLKRNYIKLSFNTVEDLVKVRKEISPAVKKNKEQGHASDAYTTMLSSVLQGGS 198

Query: 178  ------KREQRPQDFLDCIVDLREYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLLE--K 229
                  +  ++  D +D IVD+REYDVPYHIR +ID  +    WY+V    +   +E  +
Sbjct: 199  VIIDEEETSKKIADQMDNIVDMREYDVPYHIRLSIDLKIHVAHWYNVRYRGSAFPVEIAR 258

Query: 230  RVDLLQRAEVHVCAFDIETTKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIED 289
            R DL++R +  V AFDIETTKLPLKFPDA+ D IMMISYM+DGQGYLI NRE V EDIED
Sbjct: 259  RDDLVERPDPVVLAFDIETTKLPLKFPDAETDQIMMISYMIDGQGYLITNREIVSEDIED 318

Query: 290  LEYTPKPEFEGYFKVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHH 349
             E+TPKPE+EG F V N  +E+ L++ WF H+QE KP I VTYNGD+FDWPF+E RAA H
Sbjct: 319  FEFTPKPEYEGPFCVFNEPDEVHLIQRWFEHIQEAKPTIMVTYNGDFFDWPFVEARAAVH 378

Query: 350  GFKMSEELGFQCDKNQGECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLE 409
            G  M +E+GFQ D +QGE ++    H+DC  WVKRDSYLP GS  LKA  KAKLGYDP+E
Sbjct: 379  GLSMYQEIGFQKD-SQGEYKSPQCIHMDCLRWVKRDSYLPVGSHNLKAAAKAKLGYDPVE 437

Query: 410  VNPEDMVRFAKEKPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSG 469
            ++PEDM R A E+PQ +A+YSVSDAVATYYLYM YVHPFIF+L TIIPM PDEVLRKGSG
Sbjct: 438  LDPEDMCRMATEQPQTLATYSVSDAVATYYLYMKYVHPFIFALCTIIPMEPDEVLRKGSG 497

Query: 470  TLCEMLLMVQAYKANVICPNKHQSDPEKFYRN-HLLESETYIGGHVECLESGVFRSDLPT 528
            TLCE LLMVQA+ AN++ PNK + +  K   + H+L++ETY+GGHVE LESGVFRSD+P 
Sbjct: 498  TLCEALLMVQAFHANIVFPNKQEQEFNKLTDDGHVLDAETYVGGHVEALESGVFRSDIPC 557

Query: 529  SFKLDPSAYEQLLNNLDRDLQYAIKVEGKMDLESVSNYDEVKNAIMEKLLRLQEEPIREE 588
             F+++P+A++ LL  +++ +++AI+ E K+ +E V N+ EV + I  KL  L++ P R E
Sbjct: 558  RFRMNPAAFDFLLQRVEKTMRHAIEEEEKVPMEQVINFQEVCDQIKTKLTSLKDVPNRIE 617

Query: 589  CPLIYHLDVAAMYPNIILTNRLQPPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEIFMG 648
            CPLIYHLDV AMYPNIILTNRLQP ++V +  C ACDFN+PG  C RK+ W WRGE    
Sbjct: 618  CPLIYHLDVGAMYPNIILTNRLQPSAMVDEATCAACDFNKPGANCQRKMAWQWRGEFMPA 677

Query: 649  KRSDYYHLKKQIESE-FVDGTNGHLSKSFLDLPKMEQQSRLKDRLKKYCQKAYKRVLDKP 707
             RS+Y+ ++ Q+ESE F   T    +++F +L + EQ    K RL  YC+KAYK++    
Sbjct: 678  SRSEYHRIQHQLESEKFPPLTPEGPARAFHELSREEQAKYEKRRLADYCRKAYKKIHMTK 737

Query: 708  VTELREAGICMRENSFYVDTVRSFRDRRYEYKGLNKVWKGKLSEAKASGNSIKIQEAQDM 767
            V E R   IC RENSFYVDTVR+FRDRRYE+KGL+KVWK KLS A   G++ +++  ++M
Sbjct: 738  VEE-RLTTICQRENSFYVDTVRAFRDRRYEFKGLHKVWKKKLSAAVEVGDAAEVKRCRNM 796

Query: 768  VVLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPL 827
             VLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAG+V +TGA II  AR LIE+IG+PL
Sbjct: 797  EVLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGIVCFTGANIITQARELIEQIGRPL 856

Query: 828  ELDTDGIWCVLPGSFPENFTFKTKDLKK-KLTISYPCVMLNVDVARNNTNDQYQTLVDPV 886
            ELDTDGIWCVLP SFPENF  KT ++KK K+TISYP  MLN+ V    TNDQYQ L +P 
Sbjct: 857  ELDTDGIWCVLPNSFPENFIIKTTNVKKPKVTISYPGAMLNIMVKEGFTNDQYQELAEPS 916

Query: 887  SKTYETHSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRG 946
            S TY T SE SI FEVDGPY AMILPASKEEG  +KKRYAVFN+DG+LAELKGFE+KRRG
Sbjct: 917  SLTYVTRSENSIFFEVDGPYLAMILPASKEEGKKLKKRYAVFNEDGSLAELKGFEVKRRG 976

Query: 947  ELKLIKVFQAELFDKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESS 1006
            EL+LIK+FQ+ +F+ FL GST+EE Y +VA VA+ WLD+L ++  ++ DSEL + ISE+ 
Sbjct: 977  ELQLIKIFQSSVFEAFLKGSTLEEVYGSVAKVADYWLDVLYSKAANMPDSELFELISENR 1036

Query: 1007 TMSKSLADYGEQKSCAVTTARRLSDFLGDTMVKDKGLRCQYIVACEPQGTPVSERAVPVA 1066
            +MS+ L DYGEQKS +++TA+RL++FLGD MVKD GL C+YI++ +P+G+PV+ERA+P+A
Sbjct: 1037 SMSRKLEDYGEQKSTSISTAKRLAEFLGDQMVKDAGLSCRYIISRKPEGSPVTERAIPLA 1096

Query: 1067 IFETDAEIMKFYLRKWCKTSS--DVGIRSIVDWSYYKQRLSSAIQKIITIPAAMQKVSNP 1124
            IF+ +  + K +LRKW K+SS  D  IR+I+DW YY +RL SAIQKIITIPAA+Q+V NP
Sbjct: 1097 IFQAEPTVRKHFLRKWLKSSSLQDFDIRTILDWDYYIERLGSAIQKIITIPAALQQVKNP 1156

Query: 1125 VPRVVHPDWLYKKVREKEDKFRQRKLVDIFS-SLKKDDFLNKTCNAETNLMDENVEDLED 1183
            VPRV HPDWL+KK+ EK D ++Q+K+ ++F    ++   + +T     +L      D+ED
Sbjct: 1157 VPRVKHPDWLHKKLLEKNDVYKQKKISELFVLEGRRQVGMAQTSEGTQSL---GSPDMED 1213

Query: 1184 FPKKRRNSVNGPRPIVRCFEVNNEQKTVKTTDQVDS--LRQQLEPSEVSDQQPSSQNAID 1241
            F           +P+     +  ++K +    Q  S  L   +   EV  Q P    A+ 
Sbjct: 1214 F--------GLTKPLHSAVPIATKRKRIHCERQEGSQDLELMMPWQEVLGQPP----ALG 1261

Query: 1242 TENIDRIVDYKGWLELKKRKWK----DNLDRRKKQKLGSLRASHQANGVSESLGDMINHK 1297
            T   + +V    WL+  K+KW+      L  +K++ L     + +   + E         
Sbjct: 1262 TTQEEWLV----WLQFHKKKWRLQAQQRLAHKKRRHLEGAEGAPRPGAIREGPS------ 1311

Query: 1298 EAQRRTGVGSYFRRQETAMTRCHWQIIQLVPSSQSGVFLAWVVVEGIMVRIPITVPRLFY 1357
                 TG+GS+FRR   ++    WQI+Q+  +SQ+G+F  W V+   +  I + +PR+FY
Sbjct: 1312 -----TGLGSFFRRTARSILDLPWQIVQISETSQAGLFRVWAVIGSDLYCIKLNIPRVFY 1366

Query: 1358 LNSKDPIVEKFPG-RRVNKTLPHGRRSFNLIEVMIDEDQFRKESKKLAALLADPEVE 1413
            +N +    E+ P  R+VN+ LP     +NL E  + ED +++   ++   LA P++E
Sbjct: 1367 VNQRVAKAEEGPSYRKVNRVLPRSNMGYNLYEYSVPEDMYQEHINEINTELAAPDIE 1423



 Score =  317 bits (812), Expect = 4e-83,   Method: Compositional matrix adjust.
 Identities = 198/613 (32%), Positives = 307/613 (50%), Gaps = 83/613 (13%)

Query: 1442 LARYAHILWISDDGVPDLGGTSEEDECFADEVHQPV---LTYPGAYRKVSVELKIHHLSV 1498
            L R+ H+LW+S    PDLGG   +D     E        +   G Y  V VEL I +L+V
Sbjct: 1676 LQRHNHLLWLSPTSRPDLGGKEADDNRLVMEFDDQAAVEINSSGCYSTVCVELDIQNLAV 1735

Query: 1499 NALLKSNQVNEMEGGGLFG--FD-------QDMNSGPYNNEL-CGFDETTSSAPAFRVVK 1548
            N +L+S+ VN+MEG    G  FD       +DM +G         +DET   +  FR++K
Sbjct: 1736 NTILQSHHVNDMEGADSIGISFDVIQQASLEDMITGNQTTSAPASYDETALCSNTFRILK 1795

Query: 1549 QLIQRCLTDAVTSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEF 1608
             ++   + +     NV+AD  + H YRWL SP S LHDP LHR LH +M+K+F  L+AEF
Sbjct: 1796 SMVVGWVKEITQYRNVYADNQVMHFYRWLRSPSSLLHDPALHRTLHSMMKKLFLQLIAEF 1855

Query: 1609 RKLGATIIFANFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLF 1668
            R+LG+++++ANF+++I+ T K  +  A AY + +  ++ ++E+F  + +     W  LL+
Sbjct: 1856 RRLGSSVVYANFNRIILCTKKRRVEDALAYVEYITNSIHSKEIFHSLTISFSRCWEFLLW 1915

Query: 1669 MDQYNYGGI----PARADESLDD------------------------------DSQVDIV 1694
            MD  NYGGI    P+R      D                              D +  + 
Sbjct: 1916 MDPSNYGGIKGTVPSRIHCGQQDSPEEGRAERGEPEEEEDEEEEEEEGDAQELDVEDLLE 1975

Query: 1695 SSWNIAEYLPK--EIQDHFVLVVSEFMYIPWKHAQKLAASRASLQEGSSCTPSITVAAAE 1752
            ++WNI ++LP+    Q +F+++VS ++         +A   +  +E    TP  T     
Sbjct: 1976 NNWNILQFLPQAASCQSYFLMIVSAYI---------VAVYHSMKEELRRSTPGSTPVRRR 2026

Query: 1753 NFESHIVQYVKGEISS----------YFTGKLLSIVRDAIHHMKKMNNDQHNSPGVMQT- 1801
               S + Q  +GE  +          Y   +L          ++K      NS  + +  
Sbjct: 2027 G-ASQLSQETQGETGALPGMITFSQDYVANELTQNFFTITQKIQKKVTGSRNSTELSEMF 2085

Query: 1802 ----AANIHKVDAPLEFIKHVCAAFALDQNVQHDVLVMRKNLLKYVRVREFAPEAEFRDP 1857
                 +++   +  LEFIK+VC   +LD NV + V  + ++LL+ V V EF+ EA+FRDP
Sbjct: 2086 PVLPGSHLLLNNPALEFIKYVCKVLSLDTNVTNQVNKLNRDLLRLVDVGEFSEEAQFRDP 2145

Query: 1858 CPSFILPNVICSYCNDCRDLDLCRDMALLAQD------WHCAMPQCGQPYDREVMENALL 1911
            C S++LP VIC  CN CRDLDLC+D +  +QD      W C+   C   YD  V+E AL+
Sbjct: 2146 CRSYVLPEVICHNCNFCRDLDLCKDPS-FSQDGTVLPQWLCS--NCQAAYDSSVIEMALV 2202

Query: 1912 QIVRQRERLYHLQDLVCIRCNQVKAAHLAEQCACAGSFRCKEDASDFRSKMQIFLNIANR 1971
            + ++++   + LQDLVC++C  VK  ++A  C+CAG F        F  ++ IF NIA  
Sbjct: 2203 EALQKKLMAFTLQDLVCLKCRGVKETNMAVYCSCAGGFSLTIHTKVFMEQIGIFRNIAQH 2262

Query: 1972 QGFQLLQECTSWI 1984
             G   L+E   W+
Sbjct: 2263 YGMSYLKETLDWL 2275


>gi|3192938|gb|AAC19148.1| DNA polymerase epsilon, catalytic polypeptide [Homo sapiens]
          Length = 2286

 Score = 1442 bits (3734), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 739/1455 (50%), Positives = 994/1455 (68%), Gaps = 82/1455 (5%)

Query: 3    RRRWD--------RQDGRRTKKQKLIR----SAEEELEAKLGYDLFSEGDKRLGWLLTFA 50
            RRR D        R DG  +    L R       ++++ + G++   E  ++ GWL+   
Sbjct: 8    RRRADPGADGEASRDDGATSSVSALKRLERSQWTDKMDLRFGFERLKEPGEKTGWLINMH 67

Query: 51   SSSLEDEDTRKVYSCIDLYFVSQDGSTFKSKYKFRPYFYAATKEKMEMDVEAYLRRRYES 110
             + + DED R + S +D YF+  DGS FK    ++PYFY AT++  E +V ++L ++++ 
Sbjct: 68   PTEILDEDKR-LGSAVDYYFIQDDGSRFKVALPYKPYFYIATRKGCEREVSSFLSKKFQG 126

Query: 111  QIADIEILEKEDLDLKNHLSGLHKSYLKISFDTVQQLMDVKKDLLHVVERNQAKFDAAEA 170
            +IA +E + KEDLDL NHL GL ++Y+++SF TV+ L+ V+K++   V++N+ +  A++A
Sbjct: 127  KIAKVETVPKEDLDLPNHLVGLKRNYIRLSFHTVEDLVKVRKEISPAVKKNREQDHASDA 186

Query: 171  YESILTG------------KREQRPQDFLDCIVDLREYDVPYHIRFAIDNDVRCGQWYDV 218
            Y ++L+             +  ++  D LD IVD+REYDVPYHIR +ID  +    WY+V
Sbjct: 187  YTALLSSVLQRGGVITDEEETSKKIADQLDNIVDMREYDVPYHIRLSIDLKIHVAHWYNV 246

Query: 219  SISSTGPLLE--KRVDLLQRAEVHVCAFDIETTKLPLKFPDADYDIIMMISYMLDGQGYL 276
                    +E  +R DL++R +  V AFDIETTKLPLKFPDA+ D IMMISYM+DGQGYL
Sbjct: 247  RYRGNAFPVEITRRDDLVERPDPVVLAFDIETTKLPLKFPDAETDQIMMISYMIDGQGYL 306

Query: 277  IINRECVGEDIEDLEYTPKPEFEGYFKVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDY 336
            I NRE V EDIED E+TPKPE+EG F V N  +E  L++ WF H+QE KP I VTYNGD+
Sbjct: 307  ITNREIVSEDIEDFEFTPKPEYEGPFCVFNEPDEAHLIQRWFEHVQETKPTIMVTYNGDF 366

Query: 337  FDWPFLETRAAHHGFKMSEELGFQCDKNQGECRAKFACHLDCFAWVKRDSYLPQGSQGLK 396
            FDWPF+E RAA HG  M +E+GFQ D +QGE +A    H+DC  WVKRDSYLP GS  LK
Sbjct: 367  FDWPFVEARAAVHGLSMQQEIGFQKD-SQGEYKAPQCIHMDCLRWVKRDSYLPVGSHNLK 425

Query: 397  AVTKAKLGYDPLEVNPEDMVRFAKEKPQMMASYSVSDAVATYYLYMTYVHPFIFSLATII 456
            A  KAKLGYDP+E++PEDM R A E+PQ +A+YSVSDAVATYYLYM YVHPFIF+L TII
Sbjct: 426  AAAKAKLGYDPVELDPEDMCRMATEQPQTLATYSVSDAVATYYLYMKYVHPFIFALCTII 485

Query: 457  PMSPDEVLRKGSGTLCEMLLMVQAYKANVICPNKHQSDPEKFYRN-HLLESETYIGGHVE 515
            PM PDEVLRKGSGTLCE LLMVQA+ AN+I PNK + +  K   + H+L+SETY+GGHVE
Sbjct: 486  PMEPDEVLRKGSGTLCEALLMVQAFHANIIFPNKQEQEFNKLTDDGHVLDSETYVGGHVE 545

Query: 516  CLESGVFRSDLPTSFKLDPSAYEQLLNNLDRDLQYAIKVEGKMDLESVSNYDEVKNAIME 575
             LESGVFRSD+P  F+++P+A++ LL  +++ L++A++ E K+ +E V+N++EV + I  
Sbjct: 546  ALESGVFRSDIPCRFRMNPAAFDFLLQRVEKTLRHALEEEEKVPVEQVTNFEEVCDEIKS 605

Query: 576  KLLRLQEEPIREECPLIYHLDVAAMYPNIILTNRLQPPSIVTDEVCTACDFNRPGKTCLR 635
            KL  L++ P R ECPLIYHLDV AMYPNIILTNRLQP ++V +  C ACDFN+PG  C R
Sbjct: 606  KLASLKDVPSRIECPLIYHLDVGAMYPNIILTNRLQPSAMVDEATCAACDFNKPGANCQR 665

Query: 636  KLEWVWRGEIFMGKRSDYYHLKKQIESE-----FVDGTNGHLSKSFLDLPKMEQQSRLKD 690
            K+ W WRGE     RS+Y+ ++ Q+ESE     F +G     +++F +L + EQ    K 
Sbjct: 666  KMAWQWRGEFMPASRSEYHRIQHQLESEKFPPLFPEGP----ARAFHELSREEQAKYEKR 721

Query: 691  RLKKYCQKAYKRVLDKPVTELREAGICMRENSFYVDTVRSFRDRRYEYKGLNKVWKGKLS 750
            RL  YC+KAYK++    V E R   IC RENSFYVDTVR+FRDRRYE+KGL+KVWK KLS
Sbjct: 722  RLADYCRKAYKKIHITKVEE-RLTTICQRENSFYVDTVRAFRDRRYEFKGLHKVWKKKLS 780

Query: 751  EAKASGNSIKIQEAQDMVVLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGA 810
             A   G++ +++  ++M VLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAG+V +TGA
Sbjct: 781  AAVEVGDAAEVKRCKNMEVLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGIVCFTGA 840

Query: 811  KIIQNARLLIEKIGKPLELDTDGIWCVLPGSFPENFTFKTKDLKK-KLTISYPCVMLNVD 869
             II  AR LIE+IG+PLELDTDGIWCVLP SFPENF FKT ++KK K+TISYP  MLN+ 
Sbjct: 841  NIITQARELIEQIGRPLELDTDGIWCVLPNSFPENFVFKTTNVKKPKVTISYPGAMLNIM 900

Query: 870  VARNNTNDQYQTLVDPVSKTYETHSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFN 929
            V    TNDQYQ L +P S TY T SE SI FEVDGPY AMILPASKEEG  +KKRYAVFN
Sbjct: 901  VKEGFTNDQYQELAEPSSLTYVTRSENSIFFEVDGPYLAMILPASKEEGKKLKKRYAVFN 960

Query: 930  DDGTLAELKGFEIKRRGELKLIKVFQAELFDKFLHGSTIEECYSAVAAVANRWLDLLDNQ 989
            +DG+LAELKGFE+KRRGEL+LIK+FQ+ +F+ FL GST+EE Y +VA VA+ WLD+L ++
Sbjct: 961  EDGSLAELKGFEVKRRGELQLIKIFQSSVFEAFLKGSTLEEVYGSVAKVADYWLDVLYSK 1020

Query: 990  GKDIADSELIDYISESSTMSKSLADYGEQKSCAVTTARRLSDFLGDTMVKDKGLRCQYIV 1049
              ++ DSEL + ISE+ +MS+ L DYGEQKS +++TA+RL++FLGD MVKD GL C+YI+
Sbjct: 1021 AANMPDSELFELISENRSMSRKLEDYGEQKSTSISTAKRLAEFLGDQMVKDAGLSCRYII 1080

Query: 1050 ACEPQGTPVSERAVPVAIFETDAEIMKFYLRKWCKTSS--DVGIRSIVDWSYYKQRLSSA 1107
            + +P+G+PV+ERA+P+AIF+ +  + K +LRKW K+SS  D  IR+I+DW YY +RL SA
Sbjct: 1081 SRKPEGSPVTERAIPLAIFQAEPTVRKHFLRKWLKSSSLQDFDIRAILDWDYYIERLGSA 1140

Query: 1108 IQKIITIPAAMQKVSNPVPRVVHPDWLYKKVREKEDKFRQRKLVDIFSSLKKDDFLNKTC 1167
            IQKIITIPAA+Q+V NPVPRV HPDWL+KK+ EK D ++Q+K+ ++F+   +        
Sbjct: 1141 IQKIITIPAALQQVKNPVPRVKHPDWLHKKLLEKNDVYKQKKISELFTLEGRRQV--TMA 1198

Query: 1168 NAETNLMDENVEDLEDFPKKRRNSVNGPRPIVRCFEVNNEQKTVKTTDQVDSLRQQLEPS 1227
             A  +    +  D+EDF       V  P P      V  ++K V    Q +S  Q L P+
Sbjct: 1199 EASEDSPRPSAPDMEDF-----GLVKLPHPAA---PVTVKRKRVLWESQEES--QDLTPT 1248

Query: 1228 ----EVSDQQPSSQNAIDTENIDRIVDYKGWLELKKRKW----KDNLDRRKKQKLGSLRA 1279
                E+  Q P    A+ T   + +V    WL   K+KW    +  L RRK+Q+L S   
Sbjct: 1249 VPWQEILGQPP----ALGTSQEEWLV----WLRFHKKKWQLQARQRLARRKRQRLESAEG 1300

Query: 1280 SHQANGVSESLGDMINHKEAQRRTGVGSYFRRQETAMTRCHWQIIQLVPSSQSGVFLAWV 1339
              +   + +              TG+GS+ RR   ++    WQI+Q+  +SQ+G+F  W 
Sbjct: 1301 VLRPGAIRDGPA-----------TGLGSFLRRTARSILDLPWQIVQISETSQAGLFRLWA 1349

Query: 1340 VVEGIMVRIPITVPRLFYLNSKDPIVEKFPG-RRVNKTLPHGRRSFNLIEVMIDEDQFRK 1398
            +V   +  I +++PR+FY+N +    E+    R+VN+ LP     +NL E  + ED +++
Sbjct: 1350 LVGSDLHCIRLSIPRVFYVNQRVAKAEEGASYRKVNRVLPRSNMVYNLYEYSVPEDMYQE 1409

Query: 1399 ESKKLAALLADPEVE 1413
               ++ A L+ P++E
Sbjct: 1410 HINEINAELSAPDIE 1424



 Score =  317 bits (813), Expect = 3e-83,   Method: Compositional matrix adjust.
 Identities = 192/609 (31%), Positives = 305/609 (50%), Gaps = 70/609 (11%)

Query: 1442 LARYAHILWISDDGVPDLGGTSEEDECFA---DEVHQPVLTYPGAYRKVSVELKIHHLSV 1498
            L R+ H+LW+S    PDLGG   +D C     D+     +   G Y  V VEL + +L+V
Sbjct: 1677 LQRHNHLLWLSPTARPDLGGKEADDNCLVMEFDDQATVEINSSGCYSTVCVELDLQNLAV 1736

Query: 1499 NALLKSNQVNEMEGGGLFGFDQD----------MNSGPYNNELCGFDETTSSAPAFRVVK 1548
            N +L+S+ VN+MEG    G   D          +  G   +    +DET   +  FR++K
Sbjct: 1737 NTILQSHHVNDMEGADSMGISFDVIQQASLEDMITGGQAASAPASYDETALCSNTFRILK 1796

Query: 1549 QLIQRCLTDAVTSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEF 1608
             ++   + +     N++AD  + H YRWL SP S LHDP LHR LH +M+K+F  L+AEF
Sbjct: 1797 SMVVGWVKEITQYHNIYADNQVMHFYRWLRSPSSLLHDPALHRTLHNMMKKLFLQLIAEF 1856

Query: 1609 RKLGATIIFANFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLF 1668
            ++LG+++I+ANF+++I+ T K  +  A AY + +  ++ ++E F  + +     W  LL+
Sbjct: 1857 KRLGSSVIYANFNRIILCTKKRRVEDAIAYVEYITSSIHSKETFHSLTISFSRCWEFLLW 1916

Query: 1669 MDQYNYGGIPARADESLD---DDSQV-------------------------------DIV 1694
            MD  NYGGI  +    +     DSQ                                D++
Sbjct: 1917 MDPSNYGGIKGKVSSRIHCGLQDSQKAGGAEDEQENEDDEEERDGEEEEEAEESNVEDLL 1976

Query: 1695 -SSWNIAEYLPK--EIQDHFVLVVSEFMYIPWKHAQKLAASRASLQEGSSCTPSITVAAA 1751
             ++WNI ++LP+    Q++F+++VS ++   + H  K    R++   GS+       +  
Sbjct: 1977 ENNWNILQFLPQAASCQNYFLMIVSAYIVAVY-HCMKDGLRRSA--PGSTPVRRRGASQL 2033

Query: 1752 ENFESHIVQYVKGEIS---SYFTGKLLSIVRDAIHHMKKMNNDQHNSPGVMQT-----AA 1803
                   V  + G I+    Y   +L          ++K      NS  + +       +
Sbjct: 2034 SQEAEGAVGALPGMITFSQDYVANELTQSFFTITQKIQKKVTGSRNSTELSEMFPVLPGS 2093

Query: 1804 NIHKVDAPLEFIKHVCAAFALDQNVQHDVLVMRKNLLKYVRVREFAPEAEFRDPCPSFIL 1863
            ++   +  LEFIK+VC   +LD N+ + V  + ++LL+ V V EF+ EA+FRDPC S++L
Sbjct: 2094 HLLLNNPALEFIKYVCKVLSLDTNITNQVNKLNRDLLRLVDVGEFSEEAQFRDPCRSYVL 2153

Query: 1864 PNVICSYCNDCRDLDLCRDM------ALLAQDWHCAMPQCGQPYDREVMENALLQIVRQR 1917
            P VIC  CN CRDLDLC+D       A+L Q W C+   C  PYD   +E  L+++++++
Sbjct: 2154 PEVICRSCNFCRDLDLCKDSSFSEDGAVLPQ-WLCS--NCQAPYDSSAIEMTLVEVLQKK 2210

Query: 1918 ERLYHLQDLVCIRCNQVKAAHLAEQCACAGSFRCKEDASDFRSKMQIFLNIANRQGFQLL 1977
               + LQDLVC++C  VK   +   C CAG F        F  ++ IF NIA   G   L
Sbjct: 2211 LMAFTLQDLVCLKCRGVKETSMPVYCTCAGDFALTIHTQVFMEQIGIFRNIAQHYGMSYL 2270

Query: 1978 QECTSWILE 1986
             E   W+L+
Sbjct: 2271 LETLEWLLQ 2279


>gi|5532283|gb|AAD44691.1| DNA polymerase epsilon catalytic subunit protein isoform b [Homo
            sapiens]
          Length = 2286

 Score = 1442 bits (3734), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 739/1455 (50%), Positives = 994/1455 (68%), Gaps = 82/1455 (5%)

Query: 3    RRRWD--------RQDGRRTKKQKLIR----SAEEELEAKLGYDLFSEGDKRLGWLLTFA 50
            RRR D        R DG  +    L R       ++++ + G++   E  ++ GWL+   
Sbjct: 8    RRRADPGADGEASRDDGATSSVSALKRLERSQWTDKMDLRFGFERLKEPGEKTGWLINMH 67

Query: 51   SSSLEDEDTRKVYSCIDLYFVSQDGSTFKSKYKFRPYFYAATKEKMEMDVEAYLRRRYES 110
             + + DED R + S +D YF+  DGS FK    ++PYFY AT++  E +V ++L ++++ 
Sbjct: 68   PTEILDEDKR-LGSAVDYYFIQDDGSRFKVALPYKPYFYIATRKGCEREVSSFLSKKFQG 126

Query: 111  QIADIEILEKEDLDLKNHLSGLHKSYLKISFDTVQQLMDVKKDLLHVVERNQAKFDAAEA 170
            +IA +E + KEDLDL NHL GL ++Y+++SF TV+ L+ V+K++   V++N+ +  A++A
Sbjct: 127  KIAKVETVPKEDLDLPNHLVGLKRNYIRLSFHTVEDLVKVRKEISPAVKKNREQDHASDA 186

Query: 171  YESILTG------------KREQRPQDFLDCIVDLREYDVPYHIRFAIDNDVRCGQWYDV 218
            Y ++L+             +  ++  D LD IVD+REYDVPYHIR +ID  +    WY+V
Sbjct: 187  YTALLSSVLQRGGVITDEEETSKKIADQLDNIVDMREYDVPYHIRLSIDLKIHVAHWYNV 246

Query: 219  SISSTGPLLE--KRVDLLQRAEVHVCAFDIETTKLPLKFPDADYDIIMMISYMLDGQGYL 276
                    +E  +R DL++R +  V AFDIETTKLPLKFPDA+ D IMMISYM+DGQGYL
Sbjct: 247  RYRGNAFPVEITRRDDLVERPDPVVLAFDIETTKLPLKFPDAETDQIMMISYMIDGQGYL 306

Query: 277  IINRECVGEDIEDLEYTPKPEFEGYFKVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDY 336
            I NRE V EDIED E+TPKPE+EG F V N  +E  L++ WF H+QE KP I VTYNGD+
Sbjct: 307  ITNREIVSEDIEDFEFTPKPEYEGPFCVFNEPDEAHLIQRWFEHVQETKPTIMVTYNGDF 366

Query: 337  FDWPFLETRAAHHGFKMSEELGFQCDKNQGECRAKFACHLDCFAWVKRDSYLPQGSQGLK 396
            FDWPF+E RAA HG  M +E+GFQ D +QGE +A    H+DC  WVKRDSYLP GS  LK
Sbjct: 367  FDWPFVEARAAVHGLSMQQEIGFQKD-SQGEYKAPQCIHMDCLRWVKRDSYLPVGSHNLK 425

Query: 397  AVTKAKLGYDPLEVNPEDMVRFAKEKPQMMASYSVSDAVATYYLYMTYVHPFIFSLATII 456
            A  KAKLGYDP+E++PEDM R A E+PQ +A+YSVSDAVATYYLYM YVHPFIF+L TII
Sbjct: 426  AAAKAKLGYDPVELDPEDMCRMATEQPQTLATYSVSDAVATYYLYMKYVHPFIFALCTII 485

Query: 457  PMSPDEVLRKGSGTLCEMLLMVQAYKANVICPNKHQSDPEKFYRN-HLLESETYIGGHVE 515
            PM PDEVLRKGSGTLCE LLMVQA+ AN+I PNK + +  K   + H+L+SETY+GGHVE
Sbjct: 486  PMEPDEVLRKGSGTLCEALLMVQAFHANIIFPNKQEQEFNKLTDDGHVLDSETYVGGHVE 545

Query: 516  CLESGVFRSDLPTSFKLDPSAYEQLLNNLDRDLQYAIKVEGKMDLESVSNYDEVKNAIME 575
             LESGVFRSD+P  F+++P+A++ LL  +++ L++A++ E K+ +E V+N++EV + I  
Sbjct: 546  ALESGVFRSDIPCRFRMNPAAFDFLLQRVEKTLRHALEEEEKVPVEQVTNFEEVCDEIKS 605

Query: 576  KLLRLQEEPIREECPLIYHLDVAAMYPNIILTNRLQPPSIVTDEVCTACDFNRPGKTCLR 635
            KL  L++ P R ECPLIYHLDV AMYPNIILTNRLQP ++V +  C ACDFN+PG  C R
Sbjct: 606  KLASLKDVPSRIECPLIYHLDVGAMYPNIILTNRLQPSAMVDEATCAACDFNKPGANCQR 665

Query: 636  KLEWVWRGEIFMGKRSDYYHLKKQIESE-----FVDGTNGHLSKSFLDLPKMEQQSRLKD 690
            K+ W WRGE     RS+Y+ ++ Q+ESE     F +G     +++F +L + EQ    K 
Sbjct: 666  KMAWQWRGEFMPASRSEYHRIQHQLESEKFPPLFPEGP----ARAFHELSREEQAKYEKR 721

Query: 691  RLKKYCQKAYKRVLDKPVTELREAGICMRENSFYVDTVRSFRDRRYEYKGLNKVWKGKLS 750
            RL  YC+KAYK++    V E R   IC RENSFYVDTVR+FRDRRYE+KGL+KVWK KLS
Sbjct: 722  RLADYCRKAYKKIHITKVEE-RLTTICQRENSFYVDTVRAFRDRRYEFKGLHKVWKKKLS 780

Query: 751  EAKASGNSIKIQEAQDMVVLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGA 810
             A   G++ +++  ++M VLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAG+V +TGA
Sbjct: 781  AAVEVGDAAEVKRCKNMEVLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGIVCFTGA 840

Query: 811  KIIQNARLLIEKIGKPLELDTDGIWCVLPGSFPENFTFKTKDLKK-KLTISYPCVMLNVD 869
             II  AR LIE+IG+PLELDTDGIWCVLP SFPENF FKT ++KK K+TISYP  MLN+ 
Sbjct: 841  NIITQARELIEQIGRPLELDTDGIWCVLPNSFPENFVFKTTNVKKPKVTISYPGAMLNIM 900

Query: 870  VARNNTNDQYQTLVDPVSKTYETHSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFN 929
            V    TNDQYQ L +P S TY T SE SI FEVDGPY AMILPASKEEG  +KKRYAVFN
Sbjct: 901  VKEGFTNDQYQELAEPSSLTYVTRSENSIFFEVDGPYLAMILPASKEEGKKLKKRYAVFN 960

Query: 930  DDGTLAELKGFEIKRRGELKLIKVFQAELFDKFLHGSTIEECYSAVAAVANRWLDLLDNQ 989
            +DG+LAELKGFE+KRRGEL+LIK+FQ+ +F+ FL GST+EE Y +VA VA+ WLD+L ++
Sbjct: 961  EDGSLAELKGFEVKRRGELQLIKIFQSSVFEAFLKGSTLEEVYGSVAKVADYWLDVLYSK 1020

Query: 990  GKDIADSELIDYISESSTMSKSLADYGEQKSCAVTTARRLSDFLGDTMVKDKGLRCQYIV 1049
              ++ DSEL + ISE+ +MS+ L DYGEQKS +++TA+RL++FLGD MVKD GL C+YI+
Sbjct: 1021 AANMPDSELFELISENRSMSRKLEDYGEQKSTSISTAKRLAEFLGDQMVKDAGLSCRYII 1080

Query: 1050 ACEPQGTPVSERAVPVAIFETDAEIMKFYLRKWCKTSS--DVGIRSIVDWSYYKQRLSSA 1107
            + +P+G+PV+ERA+P+AIF+ +  + K +LRKW K+SS  D  IR+I+DW YY +RL SA
Sbjct: 1081 SRKPEGSPVTERAIPLAIFQAEPTVRKHFLRKWLKSSSLQDFDIRAILDWDYYIERLGSA 1140

Query: 1108 IQKIITIPAAMQKVSNPVPRVVHPDWLYKKVREKEDKFRQRKLVDIFSSLKKDDFLNKTC 1167
            IQKIITIPAA+Q+V NPVPRV HPDWL+KK+ EK D ++Q+K+ ++F+   +        
Sbjct: 1141 IQKIITIPAALQQVKNPVPRVKHPDWLHKKLLEKNDVYKQKKISELFTLEGRRQV--TMA 1198

Query: 1168 NAETNLMDENVEDLEDFPKKRRNSVNGPRPIVRCFEVNNEQKTVKTTDQVDSLRQQLEPS 1227
             A  +    +  D+EDF       V  P P      V  ++K V    Q +S  Q L P+
Sbjct: 1199 EASEDSPRPSAPDMEDF-----GLVKLPHPAA---PVTVKRKRVLWESQEES--QDLTPT 1248

Query: 1228 ----EVSDQQPSSQNAIDTENIDRIVDYKGWLELKKRKW----KDNLDRRKKQKLGSLRA 1279
                E+  Q P    A+ T   + +V    WL   K+KW    +  L RRK+Q+L S   
Sbjct: 1249 VPWQEILGQPP----ALGTSQEEWLV----WLRFHKKKWQLQARQRLARRKRQRLESAEG 1300

Query: 1280 SHQANGVSESLGDMINHKEAQRRTGVGSYFRRQETAMTRCHWQIIQLVPSSQSGVFLAWV 1339
              +   + +              TG+GS+ RR   ++    WQI+Q+  +SQ+G+F  W 
Sbjct: 1301 VLRPGAIRDGPA-----------TGLGSFLRRTARSILDLPWQIVQISETSQAGLFRLWA 1349

Query: 1340 VVEGIMVRIPITVPRLFYLNSKDPIVEKFPG-RRVNKTLPHGRRSFNLIEVMIDEDQFRK 1398
            +V   +  I +++PR+FY+N +    E+    R+VN+ LP     +NL E  + ED +++
Sbjct: 1350 LVGSDLHCIRLSIPRVFYVNQRVAKAEEGASYRKVNRVLPRSNMVYNLYEYSVPEDMYQE 1409

Query: 1399 ESKKLAALLADPEVE 1413
               ++ A L+ P++E
Sbjct: 1410 HINEINAELSAPDIE 1424



 Score =  317 bits (813), Expect = 3e-83,   Method: Compositional matrix adjust.
 Identities = 192/609 (31%), Positives = 305/609 (50%), Gaps = 70/609 (11%)

Query: 1442 LARYAHILWISDDGVPDLGGTSEEDECFA---DEVHQPVLTYPGAYRKVSVELKIHHLSV 1498
            L R+ H+LW+S    PDLGG   +D C     D+     +   G Y  V VEL + +L+V
Sbjct: 1677 LQRHNHLLWLSPTARPDLGGKEADDNCLVMEFDDQATVEINSSGCYSTVCVELDLQNLAV 1736

Query: 1499 NALLKSNQVNEMEGGGLFGFDQD----------MNSGPYNNELCGFDETTSSAPAFRVVK 1548
            N +L+S+ VN+MEG    G   D          +  G   +    +DET   +  FR++K
Sbjct: 1737 NTILQSHHVNDMEGADSMGISFDVIQQASLEDMITGGQAASAPASYDETALCSNTFRILK 1796

Query: 1549 QLIQRCLTDAVTSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEF 1608
             ++   + +     N++AD  + H YRWL SP S LHDP LHR LH +M+K+F  L+AEF
Sbjct: 1797 SMVVGWVKEITQYHNIYADNQVMHFYRWLRSPSSLLHDPALHRTLHNMMKKLFLQLIAEF 1856

Query: 1609 RKLGATIIFANFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLF 1668
            ++LG+++I+ANF+++I+ T K  +  A AY + +  ++ ++E F  + +     W  LL+
Sbjct: 1857 KRLGSSVIYANFNRIILCTKKRRVEDAIAYVEYITSSIHSKETFHSLTISFSRCWEFLLW 1916

Query: 1669 MDQYNYGGIPARADESLD---DDSQV-------------------------------DIV 1694
            MD  NYGGI  +    +     DSQ                                D++
Sbjct: 1917 MDPSNYGGIKGKVSSRIHCGLQDSQKAGGAEDEQENEDDEEERDGEEEEEAEESNVEDLL 1976

Query: 1695 -SSWNIAEYLPK--EIQDHFVLVVSEFMYIPWKHAQKLAASRASLQEGSSCTPSITVAAA 1751
             ++WNI ++LP+    Q++F+++VS ++   + H  K    R++   GS+       +  
Sbjct: 1977 ENNWNILQFLPQAASCQNYFLMIVSAYIVAVY-HCMKDGLRRSA--PGSTPVRRRGASQL 2033

Query: 1752 ENFESHIVQYVKGEIS---SYFTGKLLSIVRDAIHHMKKMNNDQHNSPGVMQT-----AA 1803
                   V  + G I+    Y   +L          ++K      NS  + +       +
Sbjct: 2034 SQEAEGAVGALPGMITFSQDYVANELTQSFFTITQKIQKKVTGSRNSTELSEMFPVLPGS 2093

Query: 1804 NIHKVDAPLEFIKHVCAAFALDQNVQHDVLVMRKNLLKYVRVREFAPEAEFRDPCPSFIL 1863
            ++   +  LEFIK+VC   +LD N+ + V  + ++LL+ V V EF+ EA+FRDPC S++L
Sbjct: 2094 HLLLNNPALEFIKYVCKVLSLDTNITNQVNKLNRDLLRLVDVGEFSEEAQFRDPCRSYVL 2153

Query: 1864 PNVICSYCNDCRDLDLCRDM------ALLAQDWHCAMPQCGQPYDREVMENALLQIVRQR 1917
            P VIC  CN CRDLDLC+D       A+L Q W C+   C  PYD   +E  L+++++++
Sbjct: 2154 PEVICRSCNFCRDLDLCKDSSFSEDGAVLPQ-WLCS--NCQAPYDSSAIEMTLVEVLQKK 2210

Query: 1918 ERLYHLQDLVCIRCNQVKAAHLAEQCACAGSFRCKEDASDFRSKMQIFLNIANRQGFQLL 1977
               + LQDLVC++C  VK   +   C CAG F        F  ++ IF NIA   G   L
Sbjct: 2211 LMAFTLQDLVCLKCRGVKETSMPVYCTCAGDFALTIHTQVFMEQIGIFRNIAQHYGMSYL 2270

Query: 1978 QECTSWILE 1986
             E   W+L+
Sbjct: 2271 LETLEWLLQ 2279


>gi|432874062|ref|XP_004072453.1| PREDICTED: DNA polymerase epsilon catalytic subunit A-like [Oryzias
            latipes]
          Length = 2291

 Score = 1442 bits (3733), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 731/1421 (51%), Positives = 989/1421 (69%), Gaps = 69/1421 (4%)

Query: 25   EELEAKLGYDLFSEGDKRLGWLLTFASSSLEDEDTRKVYSCIDLYFVSQDGSTFKSKYKF 84
            ++++A+ G+D   E  ++ GWL+    + + DED R + S +D YF+ +DGS FK    F
Sbjct: 42   DDMDARFGFDRMKEPGEKTGWLINMHPTEILDEDKRMI-SAVDYYFIQEDGSRFKVALPF 100

Query: 85   RPYFYAATKEKMEMDVEAYLRRRYESQIADIEILEKEDLDLKNHLSGLHKSYLKISFDTV 144
            +PYFY ATK+  E +V +YL ++++ ++A +E+L KEDLDL NHL GL ++Y+K+SF+TV
Sbjct: 101  KPYFYIATKKNCEREVISYLSKKFQGKVAKLEMLPKEDLDLPNHLVGLKRNYIKLSFNTV 160

Query: 145  QQLMDVKKDLLHVVERNQAKFDAAEAYESILTGK-------------REQRPQDFLDCIV 191
              L+ VK+++   V +N+ +  + + Y S+L+                 +   D LD +V
Sbjct: 161  DDLIKVKREIAPAVRKNREREQSHDEYTSMLSSALSGVGVTTADEDGMSKSIVDQLDNVV 220

Query: 192  DLREYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLLE--KRVDLLQRAEVHVCAFDIETT 249
            D+REYDVPYH+R +ID  +    WY+V   S    LE  +R DL++R +  V AFDIETT
Sbjct: 221  DMREYDVPYHVRLSIDLKIHVAHWYNVRYRSNAYPLEIIRRDDLVERPDPVVLAFDIETT 280

Query: 250  KLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNVNN 309
            KLPLKFPDA+ D IMMISYM+DGQG+LI NRE V E+IED E+TPKPE+EG F V N +N
Sbjct: 281  KLPLKFPDAESDQIMMISYMIDGQGFLITNREIVSENIEDFEFTPKPEYEGPFTVFNEDN 340

Query: 310  EIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDKNQGECR 369
            E  L++ WF H+QE KP I+VTYNGD+FDWPF+ETRAA HG  M  E+GFQ D +QGE +
Sbjct: 341  EAALIQRWFDHVQETKPNIFVTYNGDFFDWPFVETRAAVHGLNMHREIGFQKD-SQGEYK 399

Query: 370  AKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQMMASY 429
            +  A H+DC  WVKRDSYLP GS  LKA  KAKLGYDP+E++PE+M R A E+PQ +A+Y
Sbjct: 400  SSQAIHMDCLRWVKRDSYLPVGSHNLKAAAKAKLGYDPVELDPEEMCRMATEEPQTLATY 459

Query: 430  SVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVICPN 489
            SVSDAVATYYLYM YVHPFIF+L TIIPM PDEVLRKGSGTLCE LLMVQA+ AN++ PN
Sbjct: 460  SVSDAVATYYLYMKYVHPFIFALCTIIPMEPDEVLRKGSGTLCEALLMVQAFHANIVFPN 519

Query: 490  KHQSDPEKFYRN-HLLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQLLNNLDRDL 548
            K +    K   + H+L+SETY+GGHVE LESGVFRSD+P  FK++P+A++ LL  ++R +
Sbjct: 520  KQEQAFNKLTDDGHVLDSETYVGGHVEALESGVFRSDIPCRFKMNPAAFDFLLQRVERTM 579

Query: 549  QYAIKVEGKMDLESVSNYDEVKNAIMEKLLRLQEEPIREECPLIYHLDVAAMYPNIILTN 608
            ++AI+ E K+ LE V+N++EV + I EKL  L+E P R ECPLIYHLDV AMYPNIILTN
Sbjct: 580  RHAIEEEEKIPLEQVTNFNEVCDEIKEKLTSLKEVPNRIECPLIYHLDVGAMYPNIILTN 639

Query: 609  RLQPPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYYHLKKQIESE----- 663
            RLQP ++V +  C ACDFN+PG TC R++ W WRGEI    RS+++ +++Q+ESE     
Sbjct: 640  RLQPSAMVDEATCAACDFNKPGATCQRRMAWQWRGEIMPASRSEFHRIQQQLESEKLPPL 699

Query: 664  FVDGTNGHLSKSFLDLPKMEQQSRLKDRLKKYCQKAYKRVLDKPVTEL--REAGICMREN 721
            F +G      ++F  L + EQ    K RL  YC+KAYK+     VT L  R   IC REN
Sbjct: 700  FPNGP----PRAFHTLNREEQAKHEKKRLADYCKKAYKKT---HVTRLEQRVTTICQREN 752

Query: 722  SFYVDTVRSFRDRRYEYKGLNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHKCI 781
            SFYVDTVR+FRDRRYE+KGL+KVWK KLS A+ SG++ +++  ++M +LY+SLQLAHKCI
Sbjct: 753  SFYVDTVRAFRDRRYEFKGLHKVWKKKLSAAQDSGDAAEVKRCKNMEILYESLQLAHKCI 812

Query: 782  LNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLPGS 841
            LNSFYGYVMRKGARWYSMEMAG+V YTGA II  AR LIE+IG+PLELDTDGIWCVLP +
Sbjct: 813  LNSFYGYVMRKGARWYSMEMAGIVCYTGANIITQARELIEQIGRPLELDTDGIWCVLPNT 872

Query: 842  FPENFTFKTKDLKK-KLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEF 900
            FPENF  KT + KK K+TISYP  MLN+ V    TNDQY  LVDP S TY T +E SI F
Sbjct: 873  FPENFVVKTSNEKKPKVTISYPGAMLNIMVKEGFTNDQYHELVDPASLTYNTRAENSIFF 932

Query: 901  EVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFD 960
            EVDGPY AMILPASKEEG  +KKRYAVFN+DG+LAELKGFEIKRRGEL+LIK+FQ+ +F+
Sbjct: 933  EVDGPYLAMILPASKEEGKKLKKRYAVFNEDGSLAELKGFEIKRRGELQLIKIFQSSVFE 992

Query: 961  KFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLADYGEQKS 1020
             FL G+T+EE Y++VA VA+ WLD+L ++  ++ D+EL D ISE+ +MS+ L DYGEQKS
Sbjct: 993  AFLKGTTLEEVYTSVAKVADYWLDVLYSKAANMPDAELFDLISENRSMSRKLEDYGEQKS 1052

Query: 1021 CAVTTARRLSDFLGDTMVKDKGLRCQYIVACEPQGTPVSERAVPVAIFETDAEIMKFYLR 1080
             +++TA+RL++FLGD MVKD GL C+Y+++ +P+G+PV+ERA+P+AIF+ ++ + K +LR
Sbjct: 1053 TSISTAKRLAEFLGDQMVKDAGLSCRYVISRKPEGSPVTERAIPLAIFQAESSVKKHFLR 1112

Query: 1081 KWCKTSS--DVGIRSIVDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLYKKV 1138
            KW K  S  D+ IRSI+DWSYY +RL SAIQKIITIPAA+Q+V NPVPRV HPDWL+KK+
Sbjct: 1113 KWLKMPSLHDLDIRSILDWSYYIERLGSAIQKIITIPAALQQVKNPVPRVRHPDWLHKKL 1172

Query: 1139 REKEDKFRQRKLVDIFSSLKKDDFLNKTCNAETNLMDENVEDLEDFPKKRRNSVNGPRPI 1198
             EK D ++Q+K+ ++F+S  K    +K  + +         D+EDF           RP+
Sbjct: 1173 LEKNDIYKQKKISELFTSEGKRQVAHKHLDTDQQ------ADIEDFGVP-------ARPL 1219

Query: 1199 VRCFEVNNEQKTVKTTDQVDSLRQQLEPSEVSDQQP-----SSQNAIDTENIDRIVDYKG 1253
                 ++ ++K  + +  VDS   Q+E  +V   Q           + T   +R+V    
Sbjct: 1220 QPAILISTKRK--RASQGVDS---QVESQDVELTQSWREILGPPPPMGTTREERLV---- 1270

Query: 1254 WLELKKRKWKDNLDRRKKQKLGSLRASHQANGVSESLGDMINHKEAQRRTGVGSYFRRQE 1313
            WL   K+KW+  L +RK+++        +A  V    G +I        TG+GS+ RR  
Sbjct: 1271 WLRYHKKKWELQLKQRKERRKRRKLLDGEAQPVG---GGVIRDGPT---TGLGSFLRRTA 1324

Query: 1314 TAMTRCHWQIIQLVPSSQSGVFLAWVVVEGIMVRIPITVPRLFYLNSKDPIVEKFPG-RR 1372
             ++    WQI+Q+  ++  G++  W V+   +  + + +PR+FY+N K P  E+    ++
Sbjct: 1325 RSILDMPWQIVQIAETAHPGLYKLWAVIGNDLHCMKLNIPRVFYVNQKVPKPEEGATYKK 1384

Query: 1373 VNKTLPHGRRSFNLIEVMIDEDQFRKESKKLAALLADPEVE 1413
            VN+ LP     + L E  + ED +++   ++ A L+ P++E
Sbjct: 1385 VNRMLPRSNMVYYLYEYSVPEDMYQEHINEINADLSAPDIE 1425



 Score =  320 bits (821), Expect = 4e-84,   Method: Compositional matrix adjust.
 Identities = 193/611 (31%), Positives = 312/611 (51%), Gaps = 75/611 (12%)

Query: 1442 LARYAHILWISDDGVPDLGGTSEEDECF---ADEVHQPVLTYPGAYRKVSVELKIHHLSV 1498
            L ++ H+LW+S    PDLGG   +D      +D+     +  PG +  V VEL +  L+V
Sbjct: 1678 LRKHNHLLWLSPTARPDLGGKEADDSRLVMESDDRGSVEINAPGCFSTVCVELDLQSLAV 1737

Query: 1499 NALLKSNQVNEMEGGGLFG--FD-------QDMNSGPYN-NELCGFDETTSSAPAFRVVK 1548
            N +L+S  VN+MEGG   G  FD       +DM SG    + L  +DET   +  FR++K
Sbjct: 1738 NTILQSQHVNDMEGGASLGVSFDVIQQASLEDMMSGNQGASALASYDETALVSNTFRILK 1797

Query: 1549 QLIQRCLTDAVTSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEF 1608
             ++   + +     NV+AD  + H YRWL SP S L+DP LHR LH +M+KVF  L AEF
Sbjct: 1798 SMVVGWVREITQYQNVYADNQVMHFYRWLRSPSSLLYDPALHRTLHNMMKKVFLQLAAEF 1857

Query: 1609 RKLGATIIFANFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLF 1668
            ++LG+T+++ NF+++I+ T K  +  A AY + +  ++ +RE+F  + +     W  LL+
Sbjct: 1858 KRLGSTVVYGNFNRIILCTKKRRIDDAVAYVEYITNSIHSREIFHSLSISFSRCWQFLLW 1917

Query: 1669 MDQYNYGGIPARADESL---DDDSQVD--------------------------------- 1692
            MD  NYGG+  +    +   + D++                                   
Sbjct: 1918 MDPSNYGGVKGKVSSDVLYGEGDTKQKKTRQGEEDEDGSEDEEEDNAEEEDEESDDVENL 1977

Query: 1693 IVSSWNIAEYLPK--EIQDHFVLVVSEFMYIPWKHAQKLAASRASLQEGSSCTPSITVAA 1750
            I S+WNI  YLP+    Q +F+++VS ++   + H+ K    R         TP      
Sbjct: 1978 IESNWNIMHYLPQTASCQQYFLMIVSAYIAAVY-HSMKEELRR----NAPGATPVKRRVG 2032

Query: 1751 AENFESHI---------VQYVKGEISSYFTGKLLSIVRDAIHHMKKMNNDQHNSPGVMQT 1801
            ++  +  +         + + +  ++S  T  + +I +     +    N    S      
Sbjct: 2033 SQASQQALGDLTALPGMISFSQEYVASELTQNIFTITQKIQKKVAGTRNVTQTSEMFPVL 2092

Query: 1802 AANIHKVDAP-LEFIKHVCAAFALDQNVQHDVLVMRKNLLKYVRVREFAPEAEFRDPCPS 1860
              +   ++ P LEF+K+VC   +LD N+ + V  ++++LL+ V V EF+ EA+FRDPC S
Sbjct: 2093 PGSHLPLNNPALEFVKYVCQVLSLDTNIVNQVNKLKRDLLRLVDVGEFSDEAQFRDPCNS 2152

Query: 1861 FILPNVICSYCNDCRDLDLCRDMALLAQD------WHCAMPQCGQPYDREVMENALLQIV 1914
            +ILP VIC +CN CRDLDLC+D + +AQD      W C+   C   Y+ + +E +L++ +
Sbjct: 2153 YILPEVICHHCNFCRDLDLCKDPS-VAQDGAVVPQWFCS--NCQAQYETDSVEVSLIEAL 2209

Query: 1915 RQRERLYHLQDLVCIRCNQVKAAHLAEQCACAGSFRCKEDASDFRSKMQIFLNIANRQGF 1974
            +++   Y LQDLVC +C  VK A++   C CAG F     A  F  ++ +F NIA+    
Sbjct: 2210 QKKLMSYTLQDLVCNKCKGVKEANMPLYCRCAGDFSLTFSAKSFSEQIMVFRNIASHYNM 2269

Query: 1975 QLLQECTSWIL 1985
            + L+E   W+L
Sbjct: 2270 RFLEETIDWLL 2280


>gi|402888203|ref|XP_003907462.1| PREDICTED: DNA polymerase epsilon catalytic subunit A [Papio anubis]
          Length = 2160

 Score = 1442 bits (3732), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 741/1455 (50%), Positives = 993/1455 (68%), Gaps = 82/1455 (5%)

Query: 3    RRRWD--------RQDGRRTKKQKLIR----SAEEELEAKLGYDLFSEGDKRLGWLLTFA 50
            RRR D        R DG  +    L R       ++++ + G++   E  ++ GWL+   
Sbjct: 8    RRRADPGADGEASRDDGATSSVSALKRLERSQWTDKMDLRFGFERLKEPGEKTGWLINMH 67

Query: 51   SSSLEDEDTRKVYSCIDLYFVSQDGSTFKSKYKFRPYFYAATKEKMEMDVEAYLRRRYES 110
             + + DED R V S +D YF+  DGS FK    ++PYFY AT++  E +V ++L ++++ 
Sbjct: 68   PTEILDEDKRLV-SAVDYYFIQDDGSRFKVALPYKPYFYIATRKGCEREVSSFLSKKFQG 126

Query: 111  QIADIEILEKEDLDLKNHLSGLHKSYLKISFDTVQQLMDVKKDLLHVVERNQAKFDAAEA 170
            +IA +E + KEDLDL NHL GL ++Y+K+SF TV+ L+ V+K++   V++N+ +  A++A
Sbjct: 127  KIAKVETVPKEDLDLPNHLVGLKRNYIKLSFHTVEDLVKVRKEISPAVKKNREQDHASDA 186

Query: 171  YESILTG------------KREQRPQDFLDCIVDLREYDVPYHIRFAIDNDVRCGQWYDV 218
            Y ++L+             +  ++  D LD IVD+REYDVPYHIR +ID  +    WY+V
Sbjct: 187  YTALLSSVLQRGGVITDEEETSKKIADQLDNIVDMREYDVPYHIRLSIDLKIHVAHWYNV 246

Query: 219  SISSTGPLLE--KRVDLLQRAEVHVCAFDIETTKLPLKFPDADYDIIMMISYMLDGQGYL 276
                    +E  +R DL++R +  V AFDIETTKLPLKFPDA+ D IMMISYM+DGQGYL
Sbjct: 247  RYRGNAFPVEITRRDDLVERPDPVVLAFDIETTKLPLKFPDAETDQIMMISYMIDGQGYL 306

Query: 277  IINRECVGEDIEDLEYTPKPEFEGYFKVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDY 336
            I NRE V EDIED E+TPKPE+EG F V N  +E  L++ WF H+QE KP I VTYNGD+
Sbjct: 307  ITNREIVSEDIEDFEFTPKPEYEGPFSVFNEPDEAHLIQRWFEHVQETKPTIMVTYNGDF 366

Query: 337  FDWPFLETRAAHHGFKMSEELGFQCDKNQGECRAKFACHLDCFAWVKRDSYLPQGSQGLK 396
            FDWPF+E RAA HG  M +E+GFQ D +QGE +A    H+DC  WVKRDSYLP GS  LK
Sbjct: 367  FDWPFVEARAAVHGLSMQQEIGFQKD-SQGEYKAPQCIHMDCLRWVKRDSYLPVGSHNLK 425

Query: 397  AVTKAKLGYDPLEVNPEDMVRFAKEKPQMMASYSVSDAVATYYLYMTYVHPFIFSLATII 456
            A  KAKLGYDP+E++PEDM R A E+PQ +A+YSVSDAVATYYLYM YVHPFIF+L TII
Sbjct: 426  AAAKAKLGYDPVELDPEDMCRMATEQPQTLATYSVSDAVATYYLYMKYVHPFIFALCTII 485

Query: 457  PMSPDEVLRKGSGTLCEMLLMVQAYKANVICPNKHQSDPEKFYRN-HLLESETYIGGHVE 515
            PM PDEVLRKGSGTLCE LLMVQA+ AN+I PNK + +  K   + H+L+SETY+GGHVE
Sbjct: 486  PMEPDEVLRKGSGTLCEALLMVQAFHANIIFPNKQEQEFNKLTDDGHVLDSETYVGGHVE 545

Query: 516  CLESGVFRSDLPTSFKLDPSAYEQLLNNLDRDLQYAIKVEGKMDLESVSNYDEVKNAIME 575
             LESGVFRSD+P  F+++P+A++ LL  +++ L++AI+ E K+ +E V+N++EV + I  
Sbjct: 546  ALESGVFRSDIPCRFRMNPAAFDFLLQRVEKTLRHAIEEEEKVPVEQVTNFEEVCDEIKS 605

Query: 576  KLLRLQEEPIREECPLIYHLDVAAMYPNIILTNRLQPPSIVTDEVCTACDFNRPGKTCLR 635
            KL  L++ P R ECPLIYHLDV AMYPNIILTNRLQP ++V +  C ACDFN+PG  C R
Sbjct: 606  KLASLKDVPSRIECPLIYHLDVGAMYPNIILTNRLQPSAMVDEATCAACDFNKPGANCQR 665

Query: 636  KLEWVWRGEIFMGKRSDYYHLKKQIESE-----FVDGTNGHLSKSFLDLPKMEQQSRLKD 690
            K+ W WRGE     RS+Y+ ++ Q+ESE     F +G     +++F +L + EQ    K 
Sbjct: 666  KMAWQWRGEFMPASRSEYHRIQHQLESEKFPALFPEGP----ARAFHELSREEQAKYEKR 721

Query: 691  RLKKYCQKAYKRVLDKPVTELREAGICMRENSFYVDTVRSFRDRRYEYKGLNKVWKGKLS 750
            RL  YC+KAYK++    V E R   IC RENSFYVDTVR+FRDRRYE+KGL+KVWK KLS
Sbjct: 722  RLADYCRKAYKKIHITKVEE-RLTTICQRENSFYVDTVRAFRDRRYEFKGLHKVWKKKLS 780

Query: 751  EAKASGNSIKIQEAQDMVVLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGA 810
             A   G++ +++  ++M VLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAG+V +TGA
Sbjct: 781  AAVEVGDAAEVKRCKNMEVLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGIVCFTGA 840

Query: 811  KIIQNARLLIEKIGKPLELDTDGIWCVLPGSFPENFTFKTKDLKK-KLTISYPCVMLNVD 869
             II  AR LIE+IG+PLELDTDGIWCVLP SFPENF FKT + KK K+TISYP  MLN+ 
Sbjct: 841  NIITQARELIEQIGRPLELDTDGIWCVLPNSFPENFVFKTTNAKKPKVTISYPGAMLNIM 900

Query: 870  VARNNTNDQYQTLVDPVSKTYETHSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFN 929
            V    TNDQYQ L +P S TY T SE SI FEVDGPY AMILPASKEEG  +KKRYAVFN
Sbjct: 901  VKEGFTNDQYQELAEPSSLTYVTRSENSIFFEVDGPYLAMILPASKEEGKKLKKRYAVFN 960

Query: 930  DDGTLAELKGFEIKRRGELKLIKVFQAELFDKFLHGSTIEECYSAVAAVANRWLDLLDNQ 989
            +DG+LAELKGFE+KRRGEL+LIK+FQ+ +F+ FL GST+EE Y +VA VA+ WLD+L ++
Sbjct: 961  EDGSLAELKGFEVKRRGELQLIKIFQSSVFEAFLKGSTLEEVYGSVAKVADYWLDVLYSK 1020

Query: 990  GKDIADSELIDYISESSTMSKSLADYGEQKSCAVTTARRLSDFLGDTMVKDKGLRCQYIV 1049
              ++ DSEL + ISE+ +MS+ L DYGEQKS +++TA+RL++FLGD MVKD GL C+YI+
Sbjct: 1021 AANMPDSELFELISENRSMSRKLEDYGEQKSTSISTAKRLAEFLGDQMVKDAGLSCRYII 1080

Query: 1050 ACEPQGTPVSERAVPVAIFETDAEIMKFYLRKWCKTSS--DVGIRSIVDWSYYKQRLSSA 1107
            + +P+G+PV+ERA+P+AIF+ +  + K +LRKW K+SS  D  IR+I+DW YY +RL SA
Sbjct: 1081 SRKPEGSPVTERAIPLAIFQAEPMVRKHFLRKWLKSSSLQDFDIRAILDWDYYIERLGSA 1140

Query: 1108 IQKIITIPAAMQKVSNPVPRVVHPDWLYKKVREKEDKFRQRKLVDIFSSLKKDDFLNKTC 1167
            IQKIITIPAA+Q+V NPVPRV HPDWL+KK+ EK D ++Q+K+ ++F+   +        
Sbjct: 1141 IQKIITIPAALQQVKNPVPRVKHPDWLHKKLLEKNDVYKQKKISELFTLEGRRQV--TMA 1198

Query: 1168 NAETNLMDENVEDLEDFPKKRRNSVNGPRPIVRCFEVNNEQKTVKTTDQVDSLRQQLEPS 1227
             A  +    +  D+EDF       V  P P      V  ++K V    Q +S  Q L P+
Sbjct: 1199 EASEDSPRPSAPDMEDF-----GLVKPPHPAA---PVAVKRKRVLWESQEES--QDLTPT 1248

Query: 1228 ----EVSDQQPSSQNAIDTENIDRIVDYKGWLELKKRKW----KDNLDRRKKQKLGSLRA 1279
                E+  Q P+    + T   + +V    WL   K+KW    +  L RRK+Q+L S   
Sbjct: 1249 VPWQEILGQPPT----LGTTQEEWLV----WLRFHKKKWQLQARQRLARRKRQRLESAEG 1300

Query: 1280 SHQANGVSESLGDMINHKEAQRRTGVGSYFRRQETAMTRCHWQIIQLVPSSQSGVFLAWV 1339
              +   + +              TG+GS+ RR   ++    WQI+Q+  +SQ+G+F  W 
Sbjct: 1301 VLRPGAIRDGPA-----------TGLGSFLRRTARSILDLPWQIVQISETSQAGLFRLWA 1349

Query: 1340 VVEGIMVRIPITVPRLFYLNSKDPIVEKFPG-RRVNKTLPHGRRSFNLIEVMIDEDQFRK 1398
            +V   +  I +++PR+FY+N +    E+    R+VN+ LP     +NL E  + ED +++
Sbjct: 1350 LVGSDLHCIRLSIPRVFYVNQRVAKAEEGASYRKVNRVLPRSNVVYNLYEYSVPEDMYQE 1409

Query: 1399 ESKKLAALLADPEVE 1413
               ++ A L+ P++E
Sbjct: 1410 HINEINAELSAPDIE 1424



 Score =  321 bits (822), Expect = 3e-84,   Method: Compositional matrix adjust.
 Identities = 195/616 (31%), Positives = 309/616 (50%), Gaps = 84/616 (13%)

Query: 1442 LARYAHILWISDDGVPDLGGTSEEDECFA---DEVHQPVLTYPGAYRKVSVELKIHHLSV 1498
            L R+ H+LW+S    PDLGG   +D C     D+     +   G Y  V VEL + +L+V
Sbjct: 1551 LHRHNHLLWLSPTARPDLGGKEADDNCLVMEFDDQATVEINSSGCYSTVCVELDLQNLAV 1610

Query: 1499 NALLKSNQVNEMEGGGLFGFDQD----------MNSGPYNNELCGFDETTSSAPAFRVVK 1548
            N +L+S+ VN+MEG    G   D          +  G   +    +DET   +  FR++K
Sbjct: 1611 NTILQSHHVNDMEGADSMGISFDVIQQASLEDMITGGQAASAPASYDETALCSNTFRILK 1670

Query: 1549 QLIQRCLTDAVTSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEF 1608
             ++   + +     N++AD  + H YRWL SP S LHDP LHR LH +M+K+F  L+AEF
Sbjct: 1671 SMVVGWVKEITQYHNIYADNQVMHFYRWLRSPSSLLHDPALHRTLHNMMKKLFLQLIAEF 1730

Query: 1609 RKLGATIIFANFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLF 1668
            ++LG+++++ANF+++I+ T K  +  A AY + +  ++  +E+F  + +     W  LL+
Sbjct: 1731 KRLGSSVVYANFNRIILCTKKRRVEDAIAYVEYITSSIHAKEIFHSLTISFSRCWEFLLW 1790

Query: 1669 MDQYNYGGI----PARADESLDDDSQV-------------------------------DI 1693
            MD  NYGGI     +R    L D  +V                                +
Sbjct: 1791 MDPSNYGGIKGKVSSRVHYGLQDSQKVQGAEDEQENADNEEERNGEEEEDAEESSVEDSL 1850

Query: 1694 VSSWNIAEYLPK--EIQDHFVLVVSEFMYIPWKHAQKLAASRAS------LQEGSSCTPS 1745
             ++WNI ++LP+    Q +F+++VS ++   + H  K    R++       + G+S    
Sbjct: 1851 ENNWNILQFLPQAASCQSYFLMIVSAYIVAVY-HCMKDGLRRSAPGSTPVRRRGASQLSQ 1909

Query: 1746 ITVAAAENFESHIV---QYVKGEIS-SYFTGKLLSIVRDAIHHMKKMNNDQHNSPGVMQT 1801
                AA      I     YV  E++ S+FT             ++K      NS  + + 
Sbjct: 1910 EAEGAAGALPGMITFSQDYVANELTQSFFT---------ITQKIQKKVTGSRNSTELSEM 1960

Query: 1802 -----AANIHKVDAPLEFIKHVCAAFALDQNVQHDVLVMRKNLLKYVRVREFAPEAEFRD 1856
                  +++   +  LEFIK+VC   +LD N+ + V  + ++LL+ V V EF+ EA+FRD
Sbjct: 1961 FPVLPGSHLLLNNPALEFIKYVCKVLSLDTNITNQVNKLNRDLLRLVDVGEFSEEAQFRD 2020

Query: 1857 PCPSFILPNVICSYCNDCRDLDLCRDM------ALLAQDWHCAMPQCGQPYDREVMENAL 1910
            PC S++LP VIC  CN CRDLDLC+D       A+L Q W C+   C  PYD  V+E  L
Sbjct: 2021 PCRSYVLPEVICRSCNFCRDLDLCKDSSFSEDGAVLPQ-WLCS--NCQAPYDSSVIEMTL 2077

Query: 1911 LQIVRQRERLYHLQDLVCIRCNQVKAAHLAEQCACAGSFRCKEDASDFRSKMQIFLNIAN 1970
            +++++++   + LQDL+C++C  VK   +   C+CAG F        F  ++ IF NIA 
Sbjct: 2078 VEVLQKKLMAFTLQDLICLKCRGVKETSMPVYCSCAGDFALTIHTQVFMEQIGIFRNIAQ 2137

Query: 1971 RQGFQLLQECTSWILE 1986
              G   L E   W+L+
Sbjct: 2138 HYGMSYLLETLEWLLQ 2153


>gi|5532284|gb|AAD44692.1| DNA polymerase epsilon catalytic subunit protein isoform c [Homo
            sapiens]
          Length = 2243

 Score = 1442 bits (3732), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 730/1419 (51%), Positives = 982/1419 (69%), Gaps = 70/1419 (4%)

Query: 27   LEAKLGYDLFSEGDKRLGWLLTFASSSLEDEDTRKVYSCIDLYFVSQDGSTFKSKYKFRP 86
            ++ + G++   E  ++ GWL+    + + DED R + S +D YF+  DGS FK    ++P
Sbjct: 1    MDLRFGFERLKEPGEKTGWLINMHPTEILDEDKR-LGSAVDYYFIQDDGSRFKVALPYKP 59

Query: 87   YFYAATKEKMEMDVEAYLRRRYESQIADIEILEKEDLDLKNHLSGLHKSYLKISFDTVQQ 146
            YFY AT++  E +V ++L ++++ +IA +E + KEDLDL NHL GL ++Y+++SF TV+ 
Sbjct: 60   YFYIATRKGCEREVSSFLSKKFQGKIAKVETVPKEDLDLPNHLVGLKRNYIRLSFHTVED 119

Query: 147  LMDVKKDLLHVVERNQAKFDAAEAYESILTG------------KREQRPQDFLDCIVDLR 194
            L+ V+K++   V++N+ +  A++AY ++L+             +  ++  D LD IVD+R
Sbjct: 120  LVKVRKEISPAVKKNREQDHASDAYTALLSSVLQRGGVITDEEETSKKIADQLDNIVDMR 179

Query: 195  EYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLLE--KRVDLLQRAEVHVCAFDIETTKLP 252
            EYDVPYHIR +ID  +    WY+V        +E  +R DL++R +  V AFDIETTKLP
Sbjct: 180  EYDVPYHIRLSIDLKIHVAHWYNVRYRGNAFPVEITRRDDLVERPDPVVLAFDIETTKLP 239

Query: 253  LKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNVNNEIE 312
            LKFPDA+ D IMMISYM+DGQGYLI NRE V EDIED E+TPKPE+EG F V N  +E  
Sbjct: 240  LKFPDAETDQIMMISYMIDGQGYLITNREIVSEDIEDFEFTPKPEYEGPFCVFNEPDEAH 299

Query: 313  LLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDKNQGECRAKF 372
            L++ WF H+QE KP I VTYNGD+FDWPF+E RAA HG  M +E+GFQ D +QGE +A  
Sbjct: 300  LIQRWFEHVQETKPTIMVTYNGDFFDWPFVEARAAVHGLSMQQEIGFQKD-SQGEYKAPQ 358

Query: 373  ACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQMMASYSVS 432
              H+DC  WVKRDSYLP GS  LKA  KAKLGYDP+E++PEDM R A E+PQ +A+YSVS
Sbjct: 359  CIHMDCLRWVKRDSYLPVGSHNLKAAAKAKLGYDPVELDPEDMCRMATEQPQTLATYSVS 418

Query: 433  DAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVICPNKHQ 492
            DAVATYYLYM YVHPFIF+L TIIPM PDEVLRKGSGTLCE LLMVQA+ AN+I PNK +
Sbjct: 419  DAVATYYLYMKYVHPFIFALCTIIPMEPDEVLRKGSGTLCEALLMVQAFHANIIFPNKQE 478

Query: 493  SDPEKFYRN-HLLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQLLNNLDRDLQYA 551
             +  K   + H+L+SETY+GGHVE LESGVFRSD+P  F+++P+A++ LL  +++ L++A
Sbjct: 479  QEFNKLTDDGHVLDSETYVGGHVEALESGVFRSDIPCRFRMNPAAFDFLLQRVEKTLRHA 538

Query: 552  IKVEGKMDLESVSNYDEVKNAIMEKLLRLQEEPIREECPLIYHLDVAAMYPNIILTNRLQ 611
            ++ E K+ +E V+N++EV + I  KL  L++ P R ECPLIYHLDV AMYPNIILTNRLQ
Sbjct: 539  LEEEEKVPVEQVTNFEEVCDEIKSKLASLKDVPSRIECPLIYHLDVGAMYPNIILTNRLQ 598

Query: 612  PPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYYHLKKQIESE-----FVD 666
            P ++V +  C ACDFN+PG  C RK+ W WRGE     RS+Y+ ++ Q+ESE     F +
Sbjct: 599  PSAMVDEATCAACDFNKPGANCQRKMAWQWRGEFMPASRSEYHRIQHQLESEKFPPLFPE 658

Query: 667  GTNGHLSKSFLDLPKMEQQSRLKDRLKKYCQKAYKRVLDKPVTELREAGICMRENSFYVD 726
            G     +++F +L + EQ    K RL  YC+KAYK++    V E R   IC RENSFYVD
Sbjct: 659  GP----ARAFHELSREEQAKYEKRRLADYCRKAYKKIHITKVEE-RLTTICQRENSFYVD 713

Query: 727  TVRSFRDRRYEYKGLNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHKCILNSFY 786
            TVR+FRDRRYE+KGL+KVWK KLS A   G++ +++  ++M VLYDSLQLAHKCILNSFY
Sbjct: 714  TVRAFRDRRYEFKGLHKVWKKKLSAAVEVGDAAEVKRCKNMEVLYDSLQLAHKCILNSFY 773

Query: 787  GYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLPGSFPENF 846
            GYVMRKGARWYSMEMAG+V +TGA II  AR LIE+IG+PLELDTDGIWCVLP SFPENF
Sbjct: 774  GYVMRKGARWYSMEMAGIVCFTGANIITQARELIEQIGRPLELDTDGIWCVLPNSFPENF 833

Query: 847  TFKTKDLKK-KLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEFEVDGP 905
             FKT ++KK K+TISYP  MLN+ V    TNDQYQ L +P S TY T SE SI FEVDGP
Sbjct: 834  VFKTTNVKKPKVTISYPGAMLNIMVKEGFTNDQYQELAEPSSLTYVTRSENSIFFEVDGP 893

Query: 906  YKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFLHG 965
            Y AMILPASKEEG  +KKRYAVFN+DG+LAELKGFE+KRRGEL+LIK+FQ+ +F+ FL G
Sbjct: 894  YLAMILPASKEEGKKLKKRYAVFNEDGSLAELKGFEVKRRGELQLIKIFQSSVFEAFLKG 953

Query: 966  STIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLADYGEQKSCAVTT 1025
            ST+EE Y +VA VA+ WLD+L ++  ++ DSEL + ISE+ +MS+ L DYGEQKS +++T
Sbjct: 954  STLEEVYGSVAKVADYWLDVLYSKAANMPDSELFELISENRSMSRKLEDYGEQKSTSIST 1013

Query: 1026 ARRLSDFLGDTMVKDKGLRCQYIVACEPQGTPVSERAVPVAIFETDAEIMKFYLRKWCKT 1085
            A+RL++FLGD MVKD GL C+YI++ +P+G+PV+ERA+P+AIF+ +  + K +LRKW K+
Sbjct: 1014 AKRLAEFLGDQMVKDAGLSCRYIISRKPEGSPVTERAIPLAIFQAEPTVRKHFLRKWLKS 1073

Query: 1086 SS--DVGIRSIVDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLYKKVREKED 1143
            SS  D  IR+I+DW YY +RL SAIQKIITIPAA+Q+V NPVPRV HPDWL+KK+ EK D
Sbjct: 1074 SSLQDFDIRAILDWDYYIERLGSAIQKIITIPAALQQVKNPVPRVKHPDWLHKKLLEKND 1133

Query: 1144 KFRQRKLVDIFSSLKKDDFLNKTCNAETNLMDENVEDLEDFPKKRRNSVNGPRPIVRCFE 1203
             ++Q+K+ ++F+   +         A  +    +  D+EDF       V  P P      
Sbjct: 1134 VYKQKKISELFTLEGRRQV--TMAEASEDSPRPSAPDMEDF-----GLVKLPHPAA---P 1183

Query: 1204 VNNEQKTVKTTDQVDSLRQQLEPS----EVSDQQPSSQNAIDTENIDRIVDYKGWLELKK 1259
            V  ++K V    Q +S  Q L P+    E+  Q P    A+ T   + +V    WL   K
Sbjct: 1184 VTVKRKRVLWESQEES--QDLTPTVPWQEILGQPP----ALGTSQEEWLV----WLRFHK 1233

Query: 1260 RKW----KDNLDRRKKQKLGSLRASHQANGVSESLGDMINHKEAQRRTGVGSYFRRQETA 1315
            +KW    +  L RRK+Q+L S     +   + +              TG+GS+ RR   +
Sbjct: 1234 KKWQLQARQRLARRKRQRLESAEGVLRPGAIRDGPA-----------TGLGSFLRRTARS 1282

Query: 1316 MTRCHWQIIQLVPSSQSGVFLAWVVVEGIMVRIPITVPRLFYLNSKDPIVEKFPG-RRVN 1374
            +    WQI+Q+  +SQ+G+F  W +V   +  I +++PR+FY+N +    E+    R+VN
Sbjct: 1283 ILDLPWQIVQISETSQAGLFRLWALVGSDLHCIRLSIPRVFYVNQRVAKAEEGASYRKVN 1342

Query: 1375 KTLPHGRRSFNLIEVMIDEDQFRKESKKLAALLADPEVE 1413
            + LP     +NL E  + ED +++   ++ A L+ P++E
Sbjct: 1343 RVLPRSNMVYNLYEYSVPEDMYQEHINEINAELSAPDIE 1381



 Score =  317 bits (813), Expect = 3e-83,   Method: Compositional matrix adjust.
 Identities = 192/609 (31%), Positives = 304/609 (49%), Gaps = 70/609 (11%)

Query: 1442 LARYAHILWISDDGVPDLGGTSEEDECFADEVHQPV---LTYPGAYRKVSVELKIHHLSV 1498
            L R+ H+LW+S    PDLGG   +D C   E        +   G Y  V VEL + +L+V
Sbjct: 1634 LQRHNHLLWLSPTARPDLGGKEADDNCLVMEFDDQATVEINSSGCYSTVCVELDLQNLAV 1693

Query: 1499 NALLKSNQVNEMEGGGLFGFDQD----------MNSGPYNNELCGFDETTSSAPAFRVVK 1548
            N +L+S+ VN+MEG    G   D          +  G   +    +DET   +  FR++K
Sbjct: 1694 NTILQSHHVNDMEGADSMGISFDVIQQASLEDMITGGQAASAPASYDETALCSNTFRILK 1753

Query: 1549 QLIQRCLTDAVTSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEF 1608
             ++   + +     N++AD  + H YRWL SP S LHDP LHR LH +M+K+F  L+AEF
Sbjct: 1754 SMVVGWVKEITQYHNIYADNQVMHFYRWLRSPSSLLHDPALHRTLHNMMKKLFLQLIAEF 1813

Query: 1609 RKLGATIIFANFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLF 1668
            ++LG+++I+ANF+++I+ T K  +  A AY + +  ++ ++E F  + +     W  LL+
Sbjct: 1814 KRLGSSVIYANFNRIILCTKKRRVEDAIAYVEYITSSIHSKETFHSLTISFSRCWEFLLW 1873

Query: 1669 MDQYNYGGIPARADESLD---DDSQV-------------------------------DIV 1694
            MD  NYGGI  +    +     DSQ                                D++
Sbjct: 1874 MDPSNYGGIKGKVSSRIHCGLQDSQKAGGAEDEQENEDDEEERDGEEEEEAEESNVEDLL 1933

Query: 1695 -SSWNIAEYLPK--EIQDHFVLVVSEFMYIPWKHAQKLAASRASLQEGSSCTPSITVAAA 1751
             ++WNI ++LP+    Q++F+++VS ++   + H  K    R++   GS+       +  
Sbjct: 1934 ENNWNILQFLPQAASCQNYFLMIVSAYIVAVY-HCMKDGLRRSA--PGSTPVRRRGASQL 1990

Query: 1752 ENFESHIVQYVKGEIS---SYFTGKLLSIVRDAIHHMKKMNNDQHNSPGVMQT-----AA 1803
                   V  + G I+    Y   +L          ++K      NS  + +       +
Sbjct: 1991 SQEAEGAVGALPGMITFSQDYVANELTQSFFTITQKIQKKVTGSRNSTELSEMFPVLPGS 2050

Query: 1804 NIHKVDAPLEFIKHVCAAFALDQNVQHDVLVMRKNLLKYVRVREFAPEAEFRDPCPSFIL 1863
            ++   +  LEFIK+VC   +LD N+ + V  + ++LL+ V V EF+ EA+FRDPC S++L
Sbjct: 2051 HLLLNNPALEFIKYVCKVLSLDTNITNQVNKLNRDLLRLVDVGEFSEEAQFRDPCRSYVL 2110

Query: 1864 PNVICSYCNDCRDLDLCRDM------ALLAQDWHCAMPQCGQPYDREVMENALLQIVRQR 1917
            P VIC  CN CRDLDLC+D       A+L Q W C+   C  PYD   +E  L+++++++
Sbjct: 2111 PEVICRSCNFCRDLDLCKDSSFSEDGAVLPQ-WLCS--NCQAPYDSSAIEMTLVEVLQKK 2167

Query: 1918 ERLYHLQDLVCIRCNQVKAAHLAEQCACAGSFRCKEDASDFRSKMQIFLNIANRQGFQLL 1977
               + LQDLVC++C  VK   +   C CAG F        F  ++ IF NIA   G   L
Sbjct: 2168 LMAFTLQDLVCLKCRGVKETSMPVYCTCAGDFALTIHTQVFMEQIGIFRNIAQHYGMSYL 2227

Query: 1978 QECTSWILE 1986
             E   W+L+
Sbjct: 2228 LETLEWLLQ 2236


>gi|30039661|gb|AAP12650.1| polymerase (DNA directed), epsilon [Homo sapiens]
          Length = 2265

 Score = 1442 bits (3732), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 730/1421 (51%), Positives = 984/1421 (69%), Gaps = 70/1421 (4%)

Query: 25   EELEAKLGYDLFSEGDKRLGWLLTFASSSLEDEDTRKVYSCIDLYFVSQDGSTFKSKYKF 84
            ++++ + G++   E  ++ GWL+    + + DED R + S +D YF+  DGS FK    +
Sbjct: 21   DKMDLRFGFERLKEPGEKTGWLINMHPTEILDEDKR-LGSAVDYYFIQDDGSRFKVALPY 79

Query: 85   RPYFYAATKEKMEMDVEAYLRRRYESQIADIEILEKEDLDLKNHLSGLHKSYLKISFDTV 144
            +PYFY AT++  E +V ++L ++++ +IA +E + KEDLDL NHL GL ++Y+++SF TV
Sbjct: 80   KPYFYIATRKGCEREVSSFLSKKFQGKIAKVETVPKEDLDLPNHLVGLKRNYIRLSFHTV 139

Query: 145  QQLMDVKKDLLHVVERNQAKFDAAEAYESILTG------------KREQRPQDFLDCIVD 192
            + L+ V+K++   V++N+ +  A++AY ++L+             +  ++  D LD IVD
Sbjct: 140  EDLVKVRKEISPAVKKNREQDHASDAYTALLSSVLQRGGVITDEEETSKKIADQLDNIVD 199

Query: 193  LREYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLLE--KRVDLLQRAEVHVCAFDIETTK 250
            +REYDVPYHIR +ID  +    WY+V        +E  +R DL++R +  V AFDIETTK
Sbjct: 200  MREYDVPYHIRLSIDLKIHVAHWYNVRYRGNAFPVEITRRDDLVERPDPVVLAFDIETTK 259

Query: 251  LPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNVNNE 310
            LPLKFPDA+ D IMMISYM+DGQGYLI NRE V EDIED E+TPKPE+EG F V N  +E
Sbjct: 260  LPLKFPDAETDQIMMISYMIDGQGYLITNREIVSEDIEDFEFTPKPEYEGPFCVFNEPDE 319

Query: 311  IELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDKNQGECRA 370
              L++ WF H+QE KP I VTYNGD+FDWPF+E RAA HG  M +E+GFQ D +QGE +A
Sbjct: 320  AHLIQRWFEHVQETKPTIMVTYNGDFFDWPFVEARAAVHGLSMQQEIGFQKD-SQGEYKA 378

Query: 371  KFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQMMASYS 430
                H+DC  WVKRDSYLP GS  LKA  KAKLGYDP+E++PEDM R A E+PQ +A+YS
Sbjct: 379  PQCIHMDCLRWVKRDSYLPVGSHNLKAAAKAKLGYDPVELDPEDMCRMATEQPQTLATYS 438

Query: 431  VSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVICPNK 490
            VSDAVATYYLYM YVHPFIF+L TIIPM PDEVLRKGSGTLCE LLMVQA+ AN+I PNK
Sbjct: 439  VSDAVATYYLYMKYVHPFIFALCTIIPMEPDEVLRKGSGTLCEALLMVQAFHANIIFPNK 498

Query: 491  HQSDPEKFYRN-HLLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQLLNNLDRDLQ 549
             + +  K   + H+L+SETY+GGHVE LESGVFRSD+P  F+++P+A++ LL  +++ L+
Sbjct: 499  QEQEFNKLTDDGHVLDSETYVGGHVEALESGVFRSDIPCRFRMNPAAFDFLLQRVEKTLR 558

Query: 550  YAIKVEGKMDLESVSNYDEVKNAIMEKLLRLQEEPIREECPLIYHLDVAAMYPNIILTNR 609
            +A++ E K+ +E V+N++EV + I  KL  L++ P R ECPLIYHLDV AMYPNIILTNR
Sbjct: 559  HALEEEEKVPVEQVTNFEEVCDEIKSKLASLKDVPSRIECPLIYHLDVGAMYPNIILTNR 618

Query: 610  LQPPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYYHLKKQIESE-----F 664
            LQP ++V +  C ACDFN+PG  C RK+ W WRGE     RS+Y+ ++ Q+ESE     F
Sbjct: 619  LQPSAMVDEATCAACDFNKPGANCQRKMAWQWRGEFMPASRSEYHRIQHQLESEKFPPLF 678

Query: 665  VDGTNGHLSKSFLDLPKMEQQSRLKDRLKKYCQKAYKRVLDKPVTELREAGICMRENSFY 724
             +G     +++F +L + EQ    K RL  YC+KAYK++    V E R   IC RENSFY
Sbjct: 679  PEGP----ARAFHELSREEQAKYEKRRLADYCRKAYKKIHITKVEE-RLTTICQRENSFY 733

Query: 725  VDTVRSFRDRRYEYKGLNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHKCILNS 784
            VDTVR+FRDRRYE+KGL+KVWK KLS A   G++ +++  ++M VLYDSLQLAHKCILNS
Sbjct: 734  VDTVRAFRDRRYEFKGLHKVWKKKLSAAVEVGDAAEVKRCKNMEVLYDSLQLAHKCILNS 793

Query: 785  FYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLPGSFPE 844
            FYGYVMRKGARWYSMEMAG+V +TGA II  AR LIE+IG+PLELDTDGIWCVLP SFPE
Sbjct: 794  FYGYVMRKGARWYSMEMAGIVCFTGANIITQARELIEQIGRPLELDTDGIWCVLPNSFPE 853

Query: 845  NFTFKTKDLKK-KLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEFEVD 903
            NF FKT ++KK K+TISYP  MLN+ V    TNDQYQ L +P S TY T SE SI FEVD
Sbjct: 854  NFVFKTTNVKKPKVTISYPGAMLNIMVKEGFTNDQYQELAEPSSLTYVTRSENSIFFEVD 913

Query: 904  GPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFL 963
            GPY AMILPASKEEG  +KKRYAVFN+DG+LAELKGFE+KRRGEL+LIK+FQ+ +F+ FL
Sbjct: 914  GPYLAMILPASKEEGKKLKKRYAVFNEDGSLAELKGFEVKRRGELQLIKIFQSSVFEAFL 973

Query: 964  HGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLADYGEQKSCAV 1023
             GST+EE Y +VA VA+ WLD+L ++  ++ DSEL + ISE+ +MS+ L DYGEQKS ++
Sbjct: 974  KGSTLEEVYGSVAKVADYWLDVLYSKAANMPDSELFELISENRSMSRKLEDYGEQKSTSI 1033

Query: 1024 TTARRLSDFLGDTMVKDKGLRCQYIVACEPQGTPVSERAVPVAIFETDAEIMKFYLRKWC 1083
            +TA+RL++FLGD MVKD GL C+YI++ +P+G+PV+ERA+P+AIF+ +  + K +LRKW 
Sbjct: 1034 STAKRLAEFLGDQMVKDAGLSCRYIISRKPEGSPVTERAIPLAIFQAEPTVRKHFLRKWL 1093

Query: 1084 KTSS--DVGIRSIVDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLYKKVREK 1141
            K+SS  D  IR+I+DW YY +RL SAIQKIITIPAA+Q+V NPVPRV HPDWL+KK+ EK
Sbjct: 1094 KSSSLQDFDIRAILDWDYYIERLGSAIQKIITIPAALQQVKNPVPRVKHPDWLHKKLLEK 1153

Query: 1142 EDKFRQRKLVDIFSSLKKDDFLNKTCNAETNLMDENVEDLEDFPKKRRNSVNGPRPIVRC 1201
             D ++Q+K+ ++F+   +         A  +    +  D+EDF       V  P P    
Sbjct: 1154 NDVYKQKKISELFTLEGRRQV--TMAEASEDSPRPSAPDMEDF-----GLVKLPHPAA-- 1204

Query: 1202 FEVNNEQKTVKTTDQVDSLRQQLEPS----EVSDQQPSSQNAIDTENIDRIVDYKGWLEL 1257
              V  ++K V    Q +S  Q L P+    E+  Q P    A+ T   + +V    WL  
Sbjct: 1205 -PVTVKRKRVLWESQEES--QDLTPTVPWQEILGQPP----ALGTSQEEWLV----WLRF 1253

Query: 1258 KKRKW----KDNLDRRKKQKLGSLRASHQANGVSESLGDMINHKEAQRRTGVGSYFRRQE 1313
             K+KW    +  L RRK+Q+L S     +   + +              TG+GS+ RR  
Sbjct: 1254 HKKKWQLQARQRLARRKRQRLESAEGVLRPGAIRDGPA-----------TGLGSFLRRTA 1302

Query: 1314 TAMTRCHWQIIQLVPSSQSGVFLAWVVVEGIMVRIPITVPRLFYLNSKDPIVEKFPG-RR 1372
             ++    WQI+Q+  +SQ+G+F  W +V   +  I +++PR+FY+N +    E+    R+
Sbjct: 1303 RSILDLPWQIVQISETSQAGLFRLWALVGSDLHCIRLSIPRVFYVNQRVAKAEEGASYRK 1362

Query: 1373 VNKTLPHGRRSFNLIEVMIDEDQFRKESKKLAALLADPEVE 1413
            VN+ LP     +NL E  + ED +++   ++ A L+ P++E
Sbjct: 1363 VNRVLPRSNMVYNLYEYSVPEDMYQEHINEINAELSAPDIE 1403



 Score =  317 bits (813), Expect = 3e-83,   Method: Compositional matrix adjust.
 Identities = 192/609 (31%), Positives = 305/609 (50%), Gaps = 70/609 (11%)

Query: 1442 LARYAHILWISDDGVPDLGGTSEEDECFADEVHQPV---LTYPGAYRKVSVELKIHHLSV 1498
            L R+ H+LW+S    PDLGG   +D C   E        +   G Y  V VEL + +L+V
Sbjct: 1656 LQRHNHLLWLSPTARPDLGGKEADDNCLVMEFDDQATVEINSSGCYSTVCVELDLQNLAV 1715

Query: 1499 NALLKSNQVNEMEGGGLFGFDQD----------MNSGPYNNELCGFDETTSSAPAFRVVK 1548
            N +L+S+ VN+MEG    G   D          +  G   +    +DET   +  FR++K
Sbjct: 1716 NTILQSHHVNDMEGADSMGISFDVIQQASLEDMITGGQAASAPASYDETALCSNTFRILK 1775

Query: 1549 QLIQRCLTDAVTSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEF 1608
             ++   + +     N++AD  + H YRWL SP S LHDP LHR LH +M+K+F  L+AEF
Sbjct: 1776 SMVVGWVKEITQYHNIYADNQVMHFYRWLRSPSSLLHDPALHRTLHNMMKKLFLQLIAEF 1835

Query: 1609 RKLGATIIFANFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLF 1668
            ++LG+++I+ANF+++I+ T K  +  A AY + +  ++ ++E F  + +     W  LL+
Sbjct: 1836 KRLGSSVIYANFNRIILCTKKRRVEDAIAYVEYITSSIHSKETFHSLTISFSRCWEFLLW 1895

Query: 1669 MDQYNYGGIPARADESLD---DDSQV-------------------------------DIV 1694
            MD  NYGGI  +    +     DSQ                                D++
Sbjct: 1896 MDPSNYGGIKGKVSSRIHCGLQDSQKAGGAEDEQENEDDEEERDGEEEEEAEESNVEDLL 1955

Query: 1695 -SSWNIAEYLPK--EIQDHFVLVVSEFMYIPWKHAQKLAASRASLQEGSSCTPSITVAAA 1751
             ++WNI ++LP+    Q++F+++VS ++   + H  K    R++   GS+       +  
Sbjct: 1956 ENNWNILQFLPQAASCQNYFLMIVSAYIVAVY-HCMKDGLRRSA--PGSTPVRRRGASQL 2012

Query: 1752 ENFESHIVQYVKGEIS---SYFTGKLLSIVRDAIHHMKKMNNDQHNSPGVMQT-----AA 1803
                   V  + G I+    Y   +L          ++K      NS  + +       +
Sbjct: 2013 SQEAEGAVGALPGMITFSQDYVANELTQSFFTITQKIQKKVTGSRNSTELSEMFPVLPGS 2072

Query: 1804 NIHKVDAPLEFIKHVCAAFALDQNVQHDVLVMRKNLLKYVRVREFAPEAEFRDPCPSFIL 1863
            ++   +  LEFIK+VC   +LD N+ + V  + ++LL+ V V EF+ EA+FRDPC S++L
Sbjct: 2073 HLLLNNPALEFIKYVCKVLSLDTNITNQVNKLNRDLLRLVDVGEFSEEAQFRDPCRSYVL 2132

Query: 1864 PNVICSYCNDCRDLDLCRDM------ALLAQDWHCAMPQCGQPYDREVMENALLQIVRQR 1917
            P VIC  CN CRDLDLC+D       A+L Q W C+   C  PYD   +E  L+++++++
Sbjct: 2133 PEVICRSCNFCRDLDLCKDSSFSEDGAVLPQ-WLCS--NCQAPYDSSAIEMTLVEVLQKK 2189

Query: 1918 ERLYHLQDLVCIRCNQVKAAHLAEQCACAGSFRCKEDASDFRSKMQIFLNIANRQGFQLL 1977
               + LQDLVC++C  VK   +   C+CAG F        F  ++ IF NIA   G   L
Sbjct: 2190 LMAFTLQDLVCLKCRGVKETSMPVYCSCAGDFALTIHTQVFMEQIGIFRNIAQHYGMSYL 2249

Query: 1978 QECTSWILE 1986
             E   W+L+
Sbjct: 2250 LETLEWLLQ 2258


>gi|410298448|gb|JAA27824.1| polymerase (DNA directed), epsilon [Pan troglodytes]
 gi|410342151|gb|JAA40022.1| polymerase (DNA directed), epsilon [Pan troglodytes]
          Length = 2286

 Score = 1441 bits (3731), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 730/1421 (51%), Positives = 984/1421 (69%), Gaps = 70/1421 (4%)

Query: 25   EELEAKLGYDLFSEGDKRLGWLLTFASSSLEDEDTRKVYSCIDLYFVSQDGSTFKSKYKF 84
            ++++ + G++   E  ++ GWL+    + + DED R + S +D YF+  DGS FK    +
Sbjct: 42   DKMDLRFGFERLKEPGEKTGWLINMHPTEILDEDKR-LGSAVDYYFIQDDGSRFKVALPY 100

Query: 85   RPYFYAATKEKMEMDVEAYLRRRYESQIADIEILEKEDLDLKNHLSGLHKSYLKISFDTV 144
            +PYFY AT++  E +V ++L ++++ +IA +E + KEDLDL NHL GL ++Y+++SF TV
Sbjct: 101  KPYFYIATRKGCEREVSSFLSKKFQGKIAKVETVPKEDLDLPNHLVGLKRNYIRLSFHTV 160

Query: 145  QQLMDVKKDLLHVVERNQAKFDAAEAYESILTG------------KREQRPQDFLDCIVD 192
            + L+ V+K++   V++N+ +  A++AY ++L+             +  ++  D LD IVD
Sbjct: 161  EDLVKVRKEISPAVKKNREQDHASDAYTALLSSVLQRGGVITDEEETSKKIADQLDNIVD 220

Query: 193  LREYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLLE--KRVDLLQRAEVHVCAFDIETTK 250
            +REYDVPYHIR +ID  +    WY+V        +E  +R DL++R +  V AFDIETTK
Sbjct: 221  MREYDVPYHIRLSIDLKIHVAHWYNVRYRGNAFPVEITRRDDLVERPDPVVLAFDIETTK 280

Query: 251  LPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNVNNE 310
            LPLKFPDA+ D IMMISYM+DGQGYLI NRE V EDIED E+TPKPE+EG F V N  +E
Sbjct: 281  LPLKFPDAETDQIMMISYMIDGQGYLITNREIVSEDIEDFEFTPKPEYEGPFCVFNEPDE 340

Query: 311  IELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDKNQGECRA 370
              L++ WF H+QE KP I VTYNGD+FDWPF+E RAA HG  M +E+GFQ D +QGE +A
Sbjct: 341  AHLIQRWFEHVQETKPTIMVTYNGDFFDWPFVEARAAVHGLSMQQEIGFQKD-SQGEYKA 399

Query: 371  KFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQMMASYS 430
                H+DC  WVKRDSYLP GS  LKA  KAKLGYDP+E++PEDM R A E+PQ +A+YS
Sbjct: 400  PQCIHMDCLRWVKRDSYLPVGSHNLKAAAKAKLGYDPVELDPEDMCRMATEQPQTLATYS 459

Query: 431  VSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVICPNK 490
            VSDAVATYYLYM YVHPFIF+L TIIPM PDEVLRKGSGTLCE LLMVQA+ AN+I PNK
Sbjct: 460  VSDAVATYYLYMKYVHPFIFALCTIIPMEPDEVLRKGSGTLCEALLMVQAFHANIIFPNK 519

Query: 491  HQSDPEKFYRN-HLLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQLLNNLDRDLQ 549
             + +  K   + H+L+SETY+GGHVE LESGVFRSD+P  F+++P+A++ LL  +++ L+
Sbjct: 520  QEQEFNKLTDDGHVLDSETYVGGHVEALESGVFRSDIPCRFRMNPAAFDFLLQRVEKTLR 579

Query: 550  YAIKVEGKMDLESVSNYDEVKNAIMEKLLRLQEEPIREECPLIYHLDVAAMYPNIILTNR 609
            +A++ E K+ +E V+N++EV + I  KL  L++ P R ECPLIYHLDV AMYPNIILTNR
Sbjct: 580  HALEEEEKVPVEQVANFEEVCDEIKSKLASLKDVPSRIECPLIYHLDVGAMYPNIILTNR 639

Query: 610  LQPPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYYHLKKQIESE-----F 664
            LQP ++V +  C ACDFN+PG  C RK+ W WRGE     RS+Y+ ++ Q+ESE     F
Sbjct: 640  LQPSAMVDEATCAACDFNKPGANCQRKMAWQWRGEFMPASRSEYHRIQHQLESEKFPPLF 699

Query: 665  VDGTNGHLSKSFLDLPKMEQQSRLKDRLKKYCQKAYKRVLDKPVTELREAGICMRENSFY 724
             +G     +++F +L + EQ    K RL  YC+KAYK++    V E R   IC RENSFY
Sbjct: 700  PEGP----ARAFHELSREEQAKYEKRRLADYCRKAYKKIHITKVEE-RLTTICQRENSFY 754

Query: 725  VDTVRSFRDRRYEYKGLNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHKCILNS 784
            VDTVR+FRDRRYE+KGL+KVWK KLS A   G++ +++  ++M VLYDSLQLAHKCILNS
Sbjct: 755  VDTVRAFRDRRYEFKGLHKVWKKKLSAAVEVGDAAEVKRCKNMEVLYDSLQLAHKCILNS 814

Query: 785  FYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLPGSFPE 844
            FYGYVMRKGARWYSMEMAG+V +TGA II  AR LIE+IG+PLELDTDGIWCVLP SFPE
Sbjct: 815  FYGYVMRKGARWYSMEMAGIVCFTGANIITQARELIEQIGRPLELDTDGIWCVLPNSFPE 874

Query: 845  NFTFKTKDLKK-KLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEFEVD 903
            NF FKT ++KK K+TISYP  MLN+ V    TNDQYQ L +P S TY T SE SI FEVD
Sbjct: 875  NFVFKTTNVKKPKVTISYPGAMLNIMVKEGFTNDQYQELAEPSSLTYVTRSENSIFFEVD 934

Query: 904  GPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFL 963
            GPY AMILPASKEEG  +KKRYAVFN+DG+LAELKGFE+KRRGEL+LIK+FQ+ +F+ FL
Sbjct: 935  GPYLAMILPASKEEGKKLKKRYAVFNEDGSLAELKGFEVKRRGELQLIKIFQSSVFEAFL 994

Query: 964  HGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLADYGEQKSCAV 1023
             GST+EE Y +VA VA+ WLD+L ++  ++ DSEL + ISE+ +MS+ L DYGEQKS ++
Sbjct: 995  KGSTLEEVYGSVAKVADYWLDVLYSKAANMPDSELFELISENRSMSRKLEDYGEQKSTSI 1054

Query: 1024 TTARRLSDFLGDTMVKDKGLRCQYIVACEPQGTPVSERAVPVAIFETDAEIMKFYLRKWC 1083
            +TA+RL++FLGD MVKD GL C+YI++ +P+G+PV+ERA+P+AIF+ +  + K +LRKW 
Sbjct: 1055 STAKRLAEFLGDQMVKDAGLSCRYIISRKPEGSPVTERAIPLAIFQAEPTVRKHFLRKWL 1114

Query: 1084 KTSS--DVGIRSIVDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLYKKVREK 1141
            K+SS  D  IR+I+DW YY +RL SAIQKIITIPAA+Q+V NPVPRV HPDWL+KK+ EK
Sbjct: 1115 KSSSLQDFDIRAILDWDYYIERLGSAIQKIITIPAALQQVKNPVPRVKHPDWLHKKLLEK 1174

Query: 1142 EDKFRQRKLVDIFSSLKKDDFLNKTCNAETNLMDENVEDLEDFPKKRRNSVNGPRPIVRC 1201
             D ++Q+K+ ++F+   +         A  +    +  D+EDF       V  P P    
Sbjct: 1175 NDVYKQKKISELFTLEGRRQV--TMAEASEDSPRPSAPDMEDF-----GLVKLPHPAA-- 1225

Query: 1202 FEVNNEQKTVKTTDQVDSLRQQLEPS----EVSDQQPSSQNAIDTENIDRIVDYKGWLEL 1257
              V  ++K V    Q +S  Q L P+    E+  Q P    A+ T   + +V    WL  
Sbjct: 1226 -PVTVKRKRVLWESQEES--QDLTPTVPWQEILGQPP----ALGTTQEEWLV----WLRF 1274

Query: 1258 KKRKW----KDNLDRRKKQKLGSLRASHQANGVSESLGDMINHKEAQRRTGVGSYFRRQE 1313
             K+KW    +  L RRK+Q+L S     +   + +              TG+GS+ RR  
Sbjct: 1275 HKKKWQLQARQRLARRKRQRLESAEGVLRPGAIRDGPA-----------TGLGSFLRRTA 1323

Query: 1314 TAMTRCHWQIIQLVPSSQSGVFLAWVVVEGIMVRIPITVPRLFYLNSKDPIVEKFPG-RR 1372
             ++    WQI+Q+  +SQ+G+F  W +V   +  I +++PR+FY+N +    E+    R+
Sbjct: 1324 RSILDLPWQIVQISETSQAGLFRLWALVGSDLHCIRLSIPRVFYVNQRVAKAEEGASYRK 1383

Query: 1373 VNKTLPHGRRSFNLIEVMIDEDQFRKESKKLAALLADPEVE 1413
            VN+ LP     +NL E  + ED +++   ++ A L+ P++E
Sbjct: 1384 VNRVLPRSNVVYNLYEYSVPEDMYQEHINEINAELSAPDIE 1424



 Score =  312 bits (799), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 190/609 (31%), Positives = 305/609 (50%), Gaps = 70/609 (11%)

Query: 1442 LARYAHILWISDDGVPDLGGTSEEDECFA---DEVHQPVLTYPGAYRKVSVELKIHHLSV 1498
            L R+ H+LW+S    PDLGG   +D       D+     +   G Y  V VEL + +L+V
Sbjct: 1677 LQRHNHLLWLSPTARPDLGGKEADDNYLVMEFDDQATVEINSSGCYSTVCVELDLQNLAV 1736

Query: 1499 NALLKSNQVNEMEGGGLFGFDQD----------MNSGPYNNELCGFDETTSSAPAFRVVK 1548
            N +L+S+ VN+MEG    G   D          +  G   +    +DET   +  FR++K
Sbjct: 1737 NTILQSHHVNDMEGADSMGISFDVIQQASLEDMITGGQAASAPASYDETALCSNTFRILK 1796

Query: 1549 QLIQRCLTDAVTSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEF 1608
             ++   + +     N++AD  + H YRWL SP S LHDP LHR LH +M+K+F  L+AEF
Sbjct: 1797 SMVVGWVKEITQYHNIYADNQVMHFYRWLRSPSSLLHDPALHRTLHNMMKKLFLQLIAEF 1856

Query: 1609 RKLGATIIFANFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLF 1668
            ++LG+++I+ANF+++I+ T K  +  A AY + +  ++ ++E+F  + +     W  LL+
Sbjct: 1857 KRLGSSVIYANFNRIILCTKKRRVEDAIAYVEYITSSIHSKEIFHSLTISFSRCWEFLLW 1916

Query: 1669 MDQYNYGGIPARADESLD---DDSQV-------------------------------DIV 1694
            MD  NYGGI  +    +     DSQ                                D++
Sbjct: 1917 MDPSNYGGIKGKVSSRIHCGLQDSQKAGGAEDEQENEDDEEERDGEEEEEAEESNVEDLL 1976

Query: 1695 -SSWNIAEYLPK--EIQDHFVLVVSEFMYIPWKHAQKLAASRASLQEGSSCTPSITVAAA 1751
             ++WNI ++LP+    Q++F+++VS ++   + H  K    R++   GS+       +  
Sbjct: 1977 ENNWNILQFLPQAASCQNYFLMIVSAYIVAVY-HCMKDGLRRSA--PGSTPVRRRGASQL 2033

Query: 1752 ENFESHIVQYVKGEIS---SYFTGKLLSIVRDAIHHMKKMNNDQHNSPGVMQT-----AA 1803
                   V  + G I+    Y   +L          ++K      NS  + +       +
Sbjct: 2034 SQEAEGAVGALPGMITFSQDYVANELTQSFFTITQKIQKKVTGSRNSTELSEMFPVLPGS 2093

Query: 1804 NIHKVDAPLEFIKHVCAAFALDQNVQHDVLVMRKNLLKYVRVREFAPEAEFRDPCPSFIL 1863
            ++   +  LEFIK+VC   +LD N+ + V  + ++LL+ V V EF+ EA+FRDPC S++L
Sbjct: 2094 HLLLNNPALEFIKYVCKVLSLDTNITNQVNKLNRDLLRLVDVGEFSEEAQFRDPCRSYVL 2153

Query: 1864 PNVICSYCNDCRDLDLCRDM------ALLAQDWHCAMPQCGQPYDREVMENALLQIVRQR 1917
            P VIC  CN CRDLDLC+D       A+L Q W C+   C  PYD   +E  L+++++++
Sbjct: 2154 PEVICRSCNFCRDLDLCKDSSFSEDGAVLPQ-WLCS--NCQAPYDSSAIEMTLVEVLQKK 2210

Query: 1918 ERLYHLQDLVCIRCNQVKAAHLAEQCACAGSFRCKEDASDFRSKMQIFLNIANRQGFQLL 1977
               + LQDLVC++C  VK   +   C+CAG F        F  ++ IF NIA       L
Sbjct: 2211 LMAFTLQDLVCLKCRGVKETSMPVYCSCAGDFALTIHTQVFMEQIGIFRNIAQHYSMSYL 2270

Query: 1978 QECTSWILE 1986
             E   W+L+
Sbjct: 2271 LETLEWLLQ 2279


>gi|119575221|gb|EAW54834.1| polymerase (DNA directed), epsilon, isoform CRA_d [Homo sapiens]
          Length = 2243

 Score = 1441 bits (3731), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 730/1419 (51%), Positives = 982/1419 (69%), Gaps = 70/1419 (4%)

Query: 27   LEAKLGYDLFSEGDKRLGWLLTFASSSLEDEDTRKVYSCIDLYFVSQDGSTFKSKYKFRP 86
            ++ + G++   E  ++ GWL+    + + DED R + S +D YF+  DGS FK    ++P
Sbjct: 1    MDLRFGFERLKEPGEKTGWLINMHPTEILDEDKR-LGSAVDYYFIQDDGSRFKVALPYKP 59

Query: 87   YFYAATKEKMEMDVEAYLRRRYESQIADIEILEKEDLDLKNHLSGLHKSYLKISFDTVQQ 146
            YFY AT++  E +V ++L ++++ +IA +E + KEDLDL NHL GL ++Y+++SF TV+ 
Sbjct: 60   YFYIATRKGCEREVSSFLSKKFQGKIAKVETVPKEDLDLPNHLVGLKRNYIRLSFHTVED 119

Query: 147  LMDVKKDLLHVVERNQAKFDAAEAYESILTG------------KREQRPQDFLDCIVDLR 194
            L+ V+K++   V++N+ +  A++AY ++L+             +  ++  D LD IVD+R
Sbjct: 120  LVKVRKEISPAVKKNREQDHASDAYTALLSSVLQRGGVITDEEETSKKIADQLDNIVDMR 179

Query: 195  EYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLLE--KRVDLLQRAEVHVCAFDIETTKLP 252
            EYDVPYHIR +ID  +    WY+V        +E  +R DL++R +  V AFDIETTKLP
Sbjct: 180  EYDVPYHIRLSIDLKIHVAHWYNVRYRGNAFPVEITRRDDLVERPDPVVLAFDIETTKLP 239

Query: 253  LKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNVNNEIE 312
            LKFPDA+ D IMMISYM+DGQGYLI NRE V EDIED E+TPKPE+EG F V N  +E  
Sbjct: 240  LKFPDAETDQIMMISYMIDGQGYLITNREIVSEDIEDFEFTPKPEYEGPFCVFNEPDEAH 299

Query: 313  LLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDKNQGECRAKF 372
            L++ WF H+QE KP I VTYNGD+FDWPF+E RAA HG  M +E+GFQ D +QGE +A  
Sbjct: 300  LIQRWFEHVQETKPTIMVTYNGDFFDWPFVEARAAVHGLSMQQEIGFQKD-SQGEYKAPQ 358

Query: 373  ACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQMMASYSVS 432
              H+DC  WVKRDSYLP GS  LKA  KAKLGYDP+E++PEDM R A E+PQ +A+YSVS
Sbjct: 359  CIHMDCLRWVKRDSYLPVGSHNLKAAAKAKLGYDPVELDPEDMCRMATEQPQTLATYSVS 418

Query: 433  DAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVICPNKHQ 492
            DAVATYYLYM YVHPFIF+L TIIPM PDEVLRKGSGTLCE LLMVQA+ AN+I PNK +
Sbjct: 419  DAVATYYLYMKYVHPFIFALCTIIPMEPDEVLRKGSGTLCEALLMVQAFHANIIFPNKQE 478

Query: 493  SDPEKFYRN-HLLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQLLNNLDRDLQYA 551
             +  K   + H+L+SETY+GGHVE LESGVFRSD+P  F+++P+A++ LL  +++ L++A
Sbjct: 479  QEFNKLTDDGHVLDSETYVGGHVEALESGVFRSDIPCRFRMNPAAFDFLLQRVEKTLRHA 538

Query: 552  IKVEGKMDLESVSNYDEVKNAIMEKLLRLQEEPIREECPLIYHLDVAAMYPNIILTNRLQ 611
            ++ E K+ +E V+N++EV + I  KL  L++ P R ECPLIYHLDV AMYPNIILTNRLQ
Sbjct: 539  LEEEEKVPVEQVTNFEEVCDEIKSKLASLKDVPSRIECPLIYHLDVGAMYPNIILTNRLQ 598

Query: 612  PPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYYHLKKQIESE-----FVD 666
            P ++V +  C ACDFN+PG  C RK+ W WRGE     RS+Y+ ++ Q+ESE     F +
Sbjct: 599  PSAMVDEATCAACDFNKPGANCQRKMAWQWRGEFMPASRSEYHRIQHQLESEKFPPLFPE 658

Query: 667  GTNGHLSKSFLDLPKMEQQSRLKDRLKKYCQKAYKRVLDKPVTELREAGICMRENSFYVD 726
            G     +++F +L + EQ    K RL  YC+KAYK++    V E R   IC RENSFYVD
Sbjct: 659  GP----ARAFHELSREEQAKYEKRRLADYCRKAYKKIHITKVEE-RLTTICQRENSFYVD 713

Query: 727  TVRSFRDRRYEYKGLNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHKCILNSFY 786
            TVR+FRDRRYE+KGL+KVWK KLS A   G++ +++  ++M VLYDSLQLAHKCILNSFY
Sbjct: 714  TVRAFRDRRYEFKGLHKVWKKKLSAAVEVGDAAEVKRCKNMEVLYDSLQLAHKCILNSFY 773

Query: 787  GYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLPGSFPENF 846
            GYVMRKGARWYSMEMAG+V +TGA II  AR LIE+IG+PLELDTDGIWCVLP SFPENF
Sbjct: 774  GYVMRKGARWYSMEMAGIVCFTGANIITQARELIEQIGRPLELDTDGIWCVLPNSFPENF 833

Query: 847  TFKTKDLKK-KLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEFEVDGP 905
             FKT ++KK K+TISYP  MLN+ V    TNDQYQ L +P S TY T SE SI FEVDGP
Sbjct: 834  VFKTTNVKKPKVTISYPGAMLNIMVKEGFTNDQYQELAEPSSLTYVTRSENSIFFEVDGP 893

Query: 906  YKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFLHG 965
            Y AMILPASKEEG  +KKRYAVFN+DG+LAELKGFE+KRRGEL+LIK+FQ+ +F+ FL G
Sbjct: 894  YLAMILPASKEEGKKLKKRYAVFNEDGSLAELKGFEVKRRGELQLIKIFQSSVFEAFLKG 953

Query: 966  STIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLADYGEQKSCAVTT 1025
            ST+EE Y +VA VA+ WLD+L ++  ++ DSEL + ISE+ +MS+ L DYGEQKS +++T
Sbjct: 954  STLEEVYGSVAKVADYWLDVLYSKAANMPDSELFELISENRSMSRKLEDYGEQKSTSIST 1013

Query: 1026 ARRLSDFLGDTMVKDKGLRCQYIVACEPQGTPVSERAVPVAIFETDAEIMKFYLRKWCKT 1085
            A+RL++FLGD MVKD GL C+YI++ +P+G+PV+ERA+P+AIF+ +  + K +LRKW K+
Sbjct: 1014 AKRLAEFLGDQMVKDAGLSCRYIISRKPEGSPVTERAIPLAIFQAEPTVRKHFLRKWLKS 1073

Query: 1086 SS--DVGIRSIVDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLYKKVREKED 1143
            SS  D  IR+I+DW YY +RL SAIQKIITIPAA+Q+V NPVPRV HPDWL+KK+ EK D
Sbjct: 1074 SSLQDFDIRAILDWDYYIERLGSAIQKIITIPAALQQVKNPVPRVKHPDWLHKKLLEKND 1133

Query: 1144 KFRQRKLVDIFSSLKKDDFLNKTCNAETNLMDENVEDLEDFPKKRRNSVNGPRPIVRCFE 1203
             ++Q+K+ ++F+   +         A  +    +  D+EDF       V  P P      
Sbjct: 1134 VYKQKKISELFTLEGRRQV--TMAEASEDSPRPSAPDMEDF-----GLVKLPHPAA---P 1183

Query: 1204 VNNEQKTVKTTDQVDSLRQQLEPS----EVSDQQPSSQNAIDTENIDRIVDYKGWLELKK 1259
            V  ++K V    Q +S  Q L P+    E+  Q P    A+ T   + +V    WL   K
Sbjct: 1184 VTVKRKRVLWESQEES--QDLTPTVPWQEILGQPP----ALGTSQEEWLV----WLRFHK 1233

Query: 1260 RKW----KDNLDRRKKQKLGSLRASHQANGVSESLGDMINHKEAQRRTGVGSYFRRQETA 1315
            +KW    +  L RRK+Q+L S     +   + +              TG+GS+ RR   +
Sbjct: 1234 KKWQLQARQRLARRKRQRLESAEGVLRPGAIRDGPA-----------TGLGSFLRRTARS 1282

Query: 1316 MTRCHWQIIQLVPSSQSGVFLAWVVVEGIMVRIPITVPRLFYLNSKDPIVEKFPG-RRVN 1374
            +    WQI+Q+  +SQ+G+F  W +V   +  I +++PR+FY+N +    E+    R+VN
Sbjct: 1283 ILDLPWQIVQISETSQAGLFRLWALVGSDLHCIRLSIPRVFYVNQRVAKAEEGASYRKVN 1342

Query: 1375 KTLPHGRRSFNLIEVMIDEDQFRKESKKLAALLADPEVE 1413
            + LP     +NL E  + ED +++   ++ A L+ P++E
Sbjct: 1343 RVLPRSNMVYNLYEYSVPEDMYQEHINEINAELSAPDIE 1381



 Score =  317 bits (813), Expect = 3e-83,   Method: Compositional matrix adjust.
 Identities = 192/609 (31%), Positives = 306/609 (50%), Gaps = 70/609 (11%)

Query: 1442 LARYAHILWISDDGVPDLGGTSEEDECFA---DEVHQPVLTYPGAYRKVSVELKIHHLSV 1498
            L R+ H+LW+S    PDLGG   +D C     D+     +   G Y  V VEL + +L+V
Sbjct: 1634 LQRHNHLLWLSPTARPDLGGKEADDNCLVMEFDDQATVEINSSGCYSTVCVELDLQNLAV 1693

Query: 1499 NALLKSNQVNEMEGGGLFGFDQD----------MNSGPYNNELCGFDETTSSAPAFRVVK 1548
            N +L+S+ VN+MEG    G   D          +  G   +    +DET   +  FR++K
Sbjct: 1694 NTILQSHHVNDMEGADSMGISFDVIQQASLEDMITGGQAASAPASYDETALCSNTFRILK 1753

Query: 1549 QLIQRCLTDAVTSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEF 1608
             ++   + +     N++AD  + H YRWL SP S LHDP LHR LH +M+K+F  L+AEF
Sbjct: 1754 SMVVGWVKEITQYHNIYADNQVMHFYRWLRSPSSLLHDPALHRTLHNMMKKLFLQLIAEF 1813

Query: 1609 RKLGATIIFANFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLF 1668
            ++LG+++I+ANF+++I+ T K  +  A AY + +  ++ ++E F  + +     W  LL+
Sbjct: 1814 KRLGSSVIYANFNRIILCTKKRRVEDAIAYVEYITSSIHSKETFHSLTISFSRCWEFLLW 1873

Query: 1669 MDQYNYGGIPARADESLD---DDSQV-------------------------------DIV 1694
            MD  NYGGI  +    +     DSQ                                D++
Sbjct: 1874 MDPSNYGGIKGKVSSRIHCGLQDSQKAGGAEDEQENEDDEEERDGEEEEEAEESNVEDLL 1933

Query: 1695 -SSWNIAEYLPK--EIQDHFVLVVSEFMYIPWKHAQKLAASRASLQEGSSCTPSITVAAA 1751
             ++WNI ++LP+    Q++F+++VS ++   + H  K    R++   GS+       +  
Sbjct: 1934 ENNWNILQFLPQAASCQNYFLMIVSAYIVAVY-HCMKDGLRRSA--PGSTPVRRRGASQL 1990

Query: 1752 ENFESHIVQYVKGEIS---SYFTGKLLSIVRDAIHHMKKMNNDQHNSPGVMQT-----AA 1803
                   V  + G I+    Y   +L          ++K      NS  + +       +
Sbjct: 1991 SQEAEGAVGALPGMITFSQDYVANELTQSFFTITQKIQKKVTGSRNSTELSEMFPVLPGS 2050

Query: 1804 NIHKVDAPLEFIKHVCAAFALDQNVQHDVLVMRKNLLKYVRVREFAPEAEFRDPCPSFIL 1863
            ++   +  LEFIK+VC   +LD N+ + V  + ++LL+ V V EF+ EA+FRDPC S++L
Sbjct: 2051 HLLLNNPALEFIKYVCKVLSLDTNITNQVNKLNRDLLRLVDVGEFSEEAQFRDPCRSYVL 2110

Query: 1864 PNVICSYCNDCRDLDLCRDM------ALLAQDWHCAMPQCGQPYDREVMENALLQIVRQR 1917
            P VIC  CN CRDLDLC+D       A+L Q W C+   C  PYD   +E  L+++++++
Sbjct: 2111 PEVICRSCNFCRDLDLCKDSSFSEDGAVLPQ-WLCS--NCQAPYDSSAIEMTLVEVLQKK 2167

Query: 1918 ERLYHLQDLVCIRCNQVKAAHLAEQCACAGSFRCKEDASDFRSKMQIFLNIANRQGFQLL 1977
               + LQDLVC++C  VK   +   C+CAG F        F  ++ IF NIA   G   L
Sbjct: 2168 LMAFTLQDLVCLKCRGVKETSMPVYCSCAGDFALTIHTQVFMEQIGIFRNIAQHYGMSYL 2227

Query: 1978 QECTSWILE 1986
             E   W+L+
Sbjct: 2228 LETLEWLLQ 2236


>gi|5532282|gb|AAD44690.1| DNA polymerase epsilon catalytic subunit protein isoform a [Homo
            sapiens]
          Length = 2297

 Score = 1441 bits (3729), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 736/1443 (51%), Positives = 993/1443 (68%), Gaps = 71/1443 (4%)

Query: 4    RRWDRQDGRRTKKQKLIRSA-EEELEAKLGYDLFSEGDKRLGWLLTFASSSLEDEDTRKV 62
            RR D      +  ++L RS   ++++ + G++   E  ++ GWL+    + + DED R +
Sbjct: 31   RRDDGATSSVSALKRLERSQWTDKMDLRFGFERLKEPGEKTGWLINMHPTEILDEDKR-L 89

Query: 63   YSCIDLYFVSQDGSTFKSKYKFRPYFYAATKEKMEMDVEAYLRRRYESQIADIEILEKED 122
             S +D YF+  DGS FK    ++PYFY AT++  E +V ++L ++++ +IA +E + KED
Sbjct: 90   GSAVDYYFIQDDGSRFKVALPYKPYFYIATRKGCEREVSSFLSKKFQGKIAKVETVPKED 149

Query: 123  LDLKNHLSGLHKSYLKISFDTVQQLMDVKKDLLHVVERNQAKFDAAEAYESILTG----- 177
            LDL NHL GL ++Y+++SF TV+ L+ V+K++   V++N+ +  A++AY ++L+      
Sbjct: 150  LDLPNHLVGLKRNYIRLSFHTVEDLVKVRKEISPAVKKNREQDHASDAYTALLSSVLQRG 209

Query: 178  -------KREQRPQDFLDCIVDLREYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLLE-- 228
                   +  ++  D LD IVD+REYDVPYHIR +ID  +    WY+V        +E  
Sbjct: 210  GVITDEEETSKKIADQLDNIVDMREYDVPYHIRLSIDLKIHVAHWYNVRYRGNAFPVEIT 269

Query: 229  KRVDLLQRAEVHVCAFDIETTKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIE 288
            +R DL++R +  V AFDIETTKLPLKFPDA+ D IMMISYM+DGQGYLI NRE V EDIE
Sbjct: 270  RRDDLVERPDPVVLAFDIETTKLPLKFPDAETDQIMMISYMIDGQGYLITNREIVSEDIE 329

Query: 289  DLEYTPKPEFEGYFKVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAH 348
            D E+TPKPE+EG F V N  +E  L++ WF H+QE KP I VTYNGD+FDWPF+E RAA 
Sbjct: 330  DFEFTPKPEYEGPFCVFNEPDEAHLIQRWFEHVQETKPTIMVTYNGDFFDWPFVEARAAV 389

Query: 349  HGFKMSEELGFQCDKNQGECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPL 408
            HG  M +E+GFQ D +QGE +A    H+DC  WVKRDSYLP GS  LKA  KAKLGYDP+
Sbjct: 390  HGLSMQQEIGFQKD-SQGEYKAPQCIHMDCLRWVKRDSYLPVGSHNLKAAAKAKLGYDPV 448

Query: 409  EVNPEDMVRFAKEKPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGS 468
            E++PEDM R A E+PQ +A+YSVSDAVATYYLYM YVHPFIF+L TIIPM PDEVLRKGS
Sbjct: 449  ELDPEDMCRMATEQPQTLATYSVSDAVATYYLYMKYVHPFIFALCTIIPMEPDEVLRKGS 508

Query: 469  GTLCEMLLMVQAYKANVICPNKHQSDPEKFYRN-HLLESETYIGGHVECLESGVFRSDLP 527
            GTLCE LLMVQA+ AN+I PNK + +  K   + H+L+SETY+GGHVE LESGVFRSD+P
Sbjct: 509  GTLCEALLMVQAFHANIIFPNKQEQEFNKLTDDGHVLDSETYVGGHVEALESGVFRSDIP 568

Query: 528  TSFKLDPSAYEQLLNNLDRDLQYAIKVEGKMDLESVSNYDEVKNAIMEKLLRLQEEPIRE 587
              F+++P+A++ LL  +++ L++A++ E K+ +E V+N++EV + I  KL  L++ P R 
Sbjct: 569  CRFRMNPAAFDFLLQRVEKTLRHALEEEEKVPVEQVTNFEEVCDEIKSKLASLKDVPSRI 628

Query: 588  ECPLIYHLDVAAMYPNIILTNRLQPPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEIFM 647
            ECPLIYHLDV AMYPNIILTNRLQP ++V +  C ACDFN+PG  C RK+ W WRGE   
Sbjct: 629  ECPLIYHLDVGAMYPNIILTNRLQPSAMVDEATCAACDFNKPGANCQRKMAWQWRGEFMP 688

Query: 648  GKRSDYYHLKKQIESE-----FVDGTNGHLSKSFLDLPKMEQQSRLKDRLKKYCQKAYKR 702
              RS+Y+ ++ Q+ESE     F +G     +++F +L + EQ    K RL  YC+KAYK+
Sbjct: 689  ASRSEYHRIQHQLESEKFPPLFPEGP----ARAFHELSREEQAKYEKRRLADYCRKAYKK 744

Query: 703  VLDKPVTELREAGICMRENSFYVDTVRSFRDRRYEYKGLNKVWKGKLSEAKASGNSIKIQ 762
            +    V E R   IC RENSFYVDTVR+FRDRRYE+KGL+KVWK KLS A   G++ +++
Sbjct: 745  IHITKVEE-RLTTICQRENSFYVDTVRAFRDRRYEFKGLHKVWKKKLSAAVEVGDAAEVK 803

Query: 763  EAQDMVVLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEK 822
              ++M VLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAG+V +TGA II  AR LIE+
Sbjct: 804  RCKNMEVLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGIVCFTGANIITQARELIEQ 863

Query: 823  IGKPLELDTDGIWCVLPGSFPENFTFKTKDLKK-KLTISYPCVMLNVDVARNNTNDQYQT 881
            IG+PLELDTDGIWCVLP SFPENF FKT ++KK K+TISYP  MLN+ V    TNDQYQ 
Sbjct: 864  IGRPLELDTDGIWCVLPNSFPENFVFKTTNVKKPKVTISYPGAMLNIMVKEGFTNDQYQE 923

Query: 882  LVDPVSKTYETHSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFE 941
            L +P S TY T SE SI FEVDGPY AMILPASKEEG  +KKRYAVFN+DG+LAELKGFE
Sbjct: 924  LAEPSSLTYVTRSENSIFFEVDGPYLAMILPASKEEGKKLKKRYAVFNEDGSLAELKGFE 983

Query: 942  IKRRGELKLIKVFQAELFDKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDY 1001
            +KRRGEL+LIK+FQ+ +F+ FL GST+EE Y +VA VA+ WLD+L ++  ++ DSEL + 
Sbjct: 984  VKRRGELQLIKIFQSSVFEAFLKGSTLEEVYGSVAKVADYWLDVLYSKAANMPDSELFEL 1043

Query: 1002 ISESSTMSKSLADYGEQKSCAVTTARRLSDFLGDTMVKDKGLRCQYIVACEPQGTPVSER 1061
            ISE+ +MS+ L DYGEQKS +++TA+RL++FLGD MVKD GL C+YI++ +P+G+PV+ER
Sbjct: 1044 ISENRSMSRKLEDYGEQKSTSISTAKRLAEFLGDQMVKDAGLSCRYIISRKPEGSPVTER 1103

Query: 1062 AVPVAIFETDAEIMKFYLRKWCKTSS--DVGIRSIVDWSYYKQRLSSAIQKIITIPAAMQ 1119
            A+P+AIF+ +  + K +LRKW K+SS  D  IR+I+DW YY +RL SAIQKIITIPAA+Q
Sbjct: 1104 AIPLAIFQAEPTVRKHFLRKWLKSSSLQDFDIRAILDWDYYIERLGSAIQKIITIPAALQ 1163

Query: 1120 KVSNPVPRVVHPDWLYKKVREKEDKFRQRKLVDIFSSLKKDDFLNKTCNAETNLMDENVE 1179
            +V NPVPRV HPDWL+KK+ EK D ++Q+K+ ++F+   +         A  +    +  
Sbjct: 1164 QVKNPVPRVKHPDWLHKKLLEKNDVYKQKKISELFTLEGRRQV--TMAEASEDSPRPSAP 1221

Query: 1180 DLEDFPKKRRNSVNGPRPIVRCFEVNNEQKTVKTTDQVDSLRQQLEPS----EVSDQQPS 1235
            D+EDF       V  P P      V  ++K V    Q +S  Q L P+    E+  Q P 
Sbjct: 1222 DMEDF-----GLVKLPHPAA---PVTVKRKRVLWESQEES--QDLTPTVPWQEILGQPP- 1270

Query: 1236 SQNAIDTENIDRIVDYKGWLELKKRKW----KDNLDRRKKQKLGSLRASHQANGVSESLG 1291
               A+ T   + +V    WL   K+KW    +  L RRK+Q+L S     +   + +   
Sbjct: 1271 ---ALGTSQEEWLV----WLRFHKKKWQLQARQRLARRKRQRLESAEGVLRPGAIRDGPA 1323

Query: 1292 DMINHKEAQRRTGVGSYFRRQETAMTRCHWQIIQLVPSSQSGVFLAWVVVEGIMVRIPIT 1351
                       TG+GS+ RR   ++    WQI+Q+  +SQ+G+F  W +V   +  I ++
Sbjct: 1324 -----------TGLGSFLRRTARSILDLPWQIVQISETSQAGLFRLWALVGSDLHCIRLS 1372

Query: 1352 VPRLFYLNSKDPIVEKFPG-RRVNKTLPHGRRSFNLIEVMIDEDQFRKESKKLAALLADP 1410
            +PR+FY+N +    E+    R+VN+ LP     +NL E  + ED +++   ++ A L+ P
Sbjct: 1373 IPRVFYVNQRVAKAEEGASYRKVNRVLPRSNMVYNLYEYSVPEDMYQEHINEINAELSAP 1432

Query: 1411 EVE 1413
            ++E
Sbjct: 1433 DIE 1435



 Score =  317 bits (811), Expect = 7e-83,   Method: Compositional matrix adjust.
 Identities = 192/609 (31%), Positives = 305/609 (50%), Gaps = 70/609 (11%)

Query: 1442 LARYAHILWISDDGVPDLGGTSEEDECFA---DEVHQPVLTYPGAYRKVSVELKIHHLSV 1498
            L R+ H+LW+S    PDLGG   +D C     D+     +   G Y  V VEL + +L+V
Sbjct: 1688 LQRHNHLLWLSPTARPDLGGKEADDNCLVMEFDDQATVEINSSGCYSTVCVELDLQNLAV 1747

Query: 1499 NALLKSNQVNEMEGGGLFGFDQD----------MNSGPYNNELCGFDETTSSAPAFRVVK 1548
            N +L+S+ VN+MEG    G   D          +  G   +    +DET   +  FR++K
Sbjct: 1748 NTILQSHHVNDMEGADSMGISFDVIQQASLEDMITGGQAASAPASYDETALCSNTFRILK 1807

Query: 1549 QLIQRCLTDAVTSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEF 1608
             ++   + +     N++AD  + H YRWL SP S LHDP LHR LH +M+K+F  L+AEF
Sbjct: 1808 SMVVGWVKEITQYHNIYADNQVMHFYRWLRSPSSLLHDPALHRTLHNMMKKLFLQLIAEF 1867

Query: 1609 RKLGATIIFANFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLF 1668
            ++LG+++I+ANF+++I+ T K  +  A AY + +  ++ ++E F  + +     W  LL+
Sbjct: 1868 KRLGSSVIYANFNRIILCTKKRRVEDAIAYVEYITSSIHSKETFHSLTISFSRCWEFLLW 1927

Query: 1669 MDQYNYGGIPARADESLD---DDSQV-------------------------------DIV 1694
            MD  NYGGI  +    +     DSQ                                D++
Sbjct: 1928 MDPSNYGGIKGKVSSRIHCGLQDSQKAGGAEDEQENEDDEEERDGEEEEEAEESNVEDLL 1987

Query: 1695 -SSWNIAEYLPK--EIQDHFVLVVSEFMYIPWKHAQKLAASRASLQEGSSCTPSITVAAA 1751
             ++WNI ++LP+    Q++F+++VS ++   + H  K    R++   GS+       +  
Sbjct: 1988 ENNWNILQFLPQAASCQNYFLMIVSAYIVAVY-HCMKDGLRRSA--PGSTPVRRRGASQL 2044

Query: 1752 ENFESHIVQYVKGEIS---SYFTGKLLSIVRDAIHHMKKMNNDQHNSPGVMQT-----AA 1803
                   V  + G I+    Y   +L          ++K      NS  + +       +
Sbjct: 2045 SQEAEGAVGALPGMITFSQDYVANELTQSFFTITQKIQKKVTGSRNSTELSEMFPVLPGS 2104

Query: 1804 NIHKVDAPLEFIKHVCAAFALDQNVQHDVLVMRKNLLKYVRVREFAPEAEFRDPCPSFIL 1863
            ++   +  LEFIK+VC   +LD N+ + V  + ++LL+ V V EF+ EA+FRDPC S++L
Sbjct: 2105 HLLLNNPALEFIKYVCKVLSLDTNITNQVNKLNRDLLRLVDVGEFSEEAQFRDPCRSYVL 2164

Query: 1864 PNVICSYCNDCRDLDLCRDM------ALLAQDWHCAMPQCGQPYDREVMENALLQIVRQR 1917
            P VIC  CN CRDLDLC+D       A+L Q W C+   C  PYD   +E  L+++++++
Sbjct: 2165 PEVICRSCNFCRDLDLCKDSSFSEDGAVLPQ-WLCS--NCQAPYDSSAIEMTLVEVLQKK 2221

Query: 1918 ERLYHLQDLVCIRCNQVKAAHLAEQCACAGSFRCKEDASDFRSKMQIFLNIANRQGFQLL 1977
               + LQDLVC++C  VK   +   C CAG F        F  ++ IF NIA   G   L
Sbjct: 2222 LMAFTLQDLVCLKCRGVKETSMPVYCTCAGDFALTIHTQVFMEQIGIFRNIAQHYGMSYL 2281

Query: 1978 QECTSWILE 1986
             E   W+L+
Sbjct: 2282 LETLEWLLQ 2290


>gi|119575218|gb|EAW54831.1| polymerase (DNA directed), epsilon, isoform CRA_b [Homo sapiens]
          Length = 2293

 Score = 1439 bits (3726), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 730/1419 (51%), Positives = 982/1419 (69%), Gaps = 70/1419 (4%)

Query: 27   LEAKLGYDLFSEGDKRLGWLLTFASSSLEDEDTRKVYSCIDLYFVSQDGSTFKSKYKFRP 86
            ++ + G++   E  ++ GWL+    + + DED R + S +D YF+  DGS FK    ++P
Sbjct: 1    MDLRFGFERLKEPGEKTGWLINMHPTEILDEDKR-LGSAVDYYFIQDDGSRFKVALPYKP 59

Query: 87   YFYAATKEKMEMDVEAYLRRRYESQIADIEILEKEDLDLKNHLSGLHKSYLKISFDTVQQ 146
            YFY AT++  E +V ++L ++++ +IA +E + KEDLDL NHL GL ++Y+++SF TV+ 
Sbjct: 60   YFYIATRKGCEREVSSFLSKKFQGKIAKVETVPKEDLDLPNHLVGLKRNYIRLSFHTVED 119

Query: 147  LMDVKKDLLHVVERNQAKFDAAEAYESILTG------------KREQRPQDFLDCIVDLR 194
            L+ V+K++   V++N+ +  A++AY ++L+             +  ++  D LD IVD+R
Sbjct: 120  LVKVRKEISPAVKKNREQDHASDAYTALLSSVLQRGGVITDEEETSKKIADQLDNIVDMR 179

Query: 195  EYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLLE--KRVDLLQRAEVHVCAFDIETTKLP 252
            EYDVPYHIR +ID  +    WY+V        +E  +R DL++R +  V AFDIETTKLP
Sbjct: 180  EYDVPYHIRLSIDLKIHVAHWYNVRYRGNAFPVEITRRDDLVERPDPVVLAFDIETTKLP 239

Query: 253  LKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNVNNEIE 312
            LKFPDA+ D IMMISYM+DGQGYLI NRE V EDIED E+TPKPE+EG F V N  +E  
Sbjct: 240  LKFPDAETDQIMMISYMIDGQGYLITNREIVSEDIEDFEFTPKPEYEGPFCVFNEPDEAH 299

Query: 313  LLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDKNQGECRAKF 372
            L++ WF H+QE KP I VTYNGD+FDWPF+E RAA HG  M +E+GFQ D +QGE +A  
Sbjct: 300  LIQRWFEHVQETKPTIMVTYNGDFFDWPFVEARAAVHGLSMQQEIGFQKD-SQGEYKAPQ 358

Query: 373  ACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQMMASYSVS 432
              H+DC  WVKRDSYLP GS  LKA  KAKLGYDP+E++PEDM R A E+PQ +A+YSVS
Sbjct: 359  CIHMDCLRWVKRDSYLPVGSHNLKAAAKAKLGYDPVELDPEDMCRMATEQPQTLATYSVS 418

Query: 433  DAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVICPNKHQ 492
            DAVATYYLYM YVHPFIF+L TIIPM PDEVLRKGSGTLCE LLMVQA+ AN+I PNK +
Sbjct: 419  DAVATYYLYMKYVHPFIFALCTIIPMEPDEVLRKGSGTLCEALLMVQAFHANIIFPNKQE 478

Query: 493  SDPEKFYRN-HLLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQLLNNLDRDLQYA 551
             +  K   + H+L+SETY+GGHVE LESGVFRSD+P  F+++P+A++ LL  +++ L++A
Sbjct: 479  QEFNKLTDDGHVLDSETYVGGHVEALESGVFRSDIPCRFRMNPAAFDFLLQRVEKTLRHA 538

Query: 552  IKVEGKMDLESVSNYDEVKNAIMEKLLRLQEEPIREECPLIYHLDVAAMYPNIILTNRLQ 611
            ++ E K+ +E V+N++EV + I  KL  L++ P R ECPLIYHLDV AMYPNIILTNRLQ
Sbjct: 539  LEEEEKVPVEQVTNFEEVCDEIKSKLASLKDVPSRIECPLIYHLDVGAMYPNIILTNRLQ 598

Query: 612  PPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYYHLKKQIESE-----FVD 666
            P ++V +  C ACDFN+PG  C RK+ W WRGE     RS+Y+ ++ Q+ESE     F +
Sbjct: 599  PSAMVDEATCAACDFNKPGANCQRKMAWQWRGEFMPASRSEYHRIQHQLESEKFPPLFPE 658

Query: 667  GTNGHLSKSFLDLPKMEQQSRLKDRLKKYCQKAYKRVLDKPVTELREAGICMRENSFYVD 726
            G     +++F +L + EQ    K RL  YC+KAYK++    V E R   IC RENSFYVD
Sbjct: 659  GP----ARAFHELSREEQAKYEKRRLADYCRKAYKKIHITKVEE-RLTTICQRENSFYVD 713

Query: 727  TVRSFRDRRYEYKGLNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHKCILNSFY 786
            TVR+FRDRRYE+KGL+KVWK KLS A   G++ +++  ++M VLYDSLQLAHKCILNSFY
Sbjct: 714  TVRAFRDRRYEFKGLHKVWKKKLSAAVEVGDAAEVKRCKNMEVLYDSLQLAHKCILNSFY 773

Query: 787  GYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLPGSFPENF 846
            GYVMRKGARWYSMEMAG+V +TGA II  AR LIE+IG+PLELDTDGIWCVLP SFPENF
Sbjct: 774  GYVMRKGARWYSMEMAGIVCFTGANIITQARELIEQIGRPLELDTDGIWCVLPNSFPENF 833

Query: 847  TFKTKDLKK-KLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEFEVDGP 905
             FKT ++KK K+TISYP  MLN+ V    TNDQYQ L +P S TY T SE SI FEVDGP
Sbjct: 834  VFKTTNVKKPKVTISYPGAMLNIMVKEGFTNDQYQELAEPSSLTYVTRSENSIFFEVDGP 893

Query: 906  YKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFLHG 965
            Y AMILPASKEEG  +KKRYAVFN+DG+LAELKGFE+KRRGEL+LIK+FQ+ +F+ FL G
Sbjct: 894  YLAMILPASKEEGKKLKKRYAVFNEDGSLAELKGFEVKRRGELQLIKIFQSSVFEAFLKG 953

Query: 966  STIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLADYGEQKSCAVTT 1025
            ST+EE Y +VA VA+ WLD+L ++  ++ DSEL + ISE+ +MS+ L DYGEQKS +++T
Sbjct: 954  STLEEVYGSVAKVADYWLDVLYSKAANMPDSELFELISENRSMSRKLEDYGEQKSTSIST 1013

Query: 1026 ARRLSDFLGDTMVKDKGLRCQYIVACEPQGTPVSERAVPVAIFETDAEIMKFYLRKWCKT 1085
            A+RL++FLGD MVKD GL C+YI++ +P+G+PV+ERA+P+AIF+ +  + K +LRKW K+
Sbjct: 1014 AKRLAEFLGDQMVKDAGLSCRYIISRKPEGSPVTERAIPLAIFQAEPTVRKHFLRKWLKS 1073

Query: 1086 SS--DVGIRSIVDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLYKKVREKED 1143
            SS  D  IR+I+DW YY +RL SAIQKIITIPAA+Q+V NPVPRV HPDWL+KK+ EK D
Sbjct: 1074 SSLQDFDIRAILDWDYYIERLGSAIQKIITIPAALQQVKNPVPRVKHPDWLHKKLLEKND 1133

Query: 1144 KFRQRKLVDIFSSLKKDDFLNKTCNAETNLMDENVEDLEDFPKKRRNSVNGPRPIVRCFE 1203
             ++Q+K+ ++F+   +         A  +    +  D+EDF       V  P P      
Sbjct: 1134 VYKQKKISELFTLEGRRQV--TMAEASEDSPRPSAPDMEDF-----GLVKLPHPAA---P 1183

Query: 1204 VNNEQKTVKTTDQVDSLRQQLEPS----EVSDQQPSSQNAIDTENIDRIVDYKGWLELKK 1259
            V  ++K V    Q +S  Q L P+    E+  Q P    A+ T   + +V    WL   K
Sbjct: 1184 VTVKRKRVLWESQEES--QDLTPTVPWQEILGQPP----ALGTSQEEWLV----WLRFHK 1233

Query: 1260 RKW----KDNLDRRKKQKLGSLRASHQANGVSESLGDMINHKEAQRRTGVGSYFRRQETA 1315
            +KW    +  L RRK+Q+L S     +   + +              TG+GS+ RR   +
Sbjct: 1234 KKWQLQARQRLARRKRQRLESAEGVLRPGAIRDGPA-----------TGLGSFLRRTARS 1282

Query: 1316 MTRCHWQIIQLVPSSQSGVFLAWVVVEGIMVRIPITVPRLFYLNSKDPIVEKFPG-RRVN 1374
            +    WQI+Q+  +SQ+G+F  W +V   +  I +++PR+FY+N +    E+    R+VN
Sbjct: 1283 ILDLPWQIVQISETSQAGLFRLWALVGSDLHCIRLSIPRVFYVNQRVAKAEEGASYRKVN 1342

Query: 1375 KTLPHGRRSFNLIEVMIDEDQFRKESKKLAALLADPEVE 1413
            + LP     +NL E  + ED +++   ++ A L+ P++E
Sbjct: 1343 RVLPRSNMVYNLYEYSVPEDMYQEHINEINAELSAPDIE 1381



 Score =  281 bits (718), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 195/664 (29%), Positives = 303/664 (45%), Gaps = 125/664 (18%)

Query: 1442 LARYAHILWISDDGVPDLGGTSEEDECFADEVHQPV---LTYPGAYRKVSVELKIHHLSV 1498
            L R+ H+LW+S    PDLGG   +D C   E        +   G Y  V VEL + +L+V
Sbjct: 1629 LQRHNHLLWLSPTARPDLGGKEADDNCLVMEFDDQATVEINSSGCYSTVCVELDLQNLAV 1688

Query: 1499 NALLKSNQVNEMEGGGLFGFDQD----------MNSGPYNNELCGFDETTSSAPAFRVVK 1548
            N +L+S+ VN+MEG    G   D          +  G   +    +DET   +  FR++K
Sbjct: 1689 NTILQSHHVNDMEGADSMGISFDVIQQASLEDMITGGQAASAPASYDETALCSNTFRILK 1748

Query: 1549 QLIQRCLTDAVTSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEF 1608
             ++   + +     N++AD  + H YRWL SP S LHDP LHR LH +M+K+F  L+AEF
Sbjct: 1749 SMVVGWVKEITQYHNIYADNQVMHFYRWLRSPSSLLHDPALHRTLHNMMKKLFLQLIAEF 1808

Query: 1609 RKLGATIIFANFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLF 1668
            ++LG+++I+ANF+++I+ T K  +  A AY + +  ++ ++E F  + +     W  LL+
Sbjct: 1809 KRLGSSVIYANFNRIILCTKKRRVEDAIAYVEYITSSIHSKETFHSLTISFSRCWEFLLW 1868

Query: 1669 MDQYNYGGIPARADESLD---DDSQV-------------------------------DIV 1694
            MD  NYGGI  +    +     DSQ                                D++
Sbjct: 1869 MDPSNYGGIKGKVSSRIHCGLQDSQKAGGAEDEQENEDDEEERDGEEEEEAEESNVEDLL 1928

Query: 1695 -SSWNIAEYLPK--EIQDHFVLVVSEFMYIPWKHAQKLAASRASLQEGSSCTPSITVAAA 1751
             ++WNI ++LP+    Q++F+++VS ++   + H  K    R++   GS+       +  
Sbjct: 1929 ENNWNILQFLPQAASCQNYFLMIVSAYIVAVY-HCMKDGLRRSA--PGSTPVRRRGASQL 1985

Query: 1752 ENFESHIVQYVKGEIS---SYFTGKLLSIVRDAIHHMKKMNNDQHNSPGVMQT-----AA 1803
                   V  + G I+    Y   +L          ++K      NS  + +       +
Sbjct: 1986 SQEAEGAVGALPGMITFSQDYVANELTQSFFTITQKIQKKVTGSRNSTELSEMFPVLPGS 2045

Query: 1804 NIHKVDAPLEFIKHVCAAFALDQNVQHDVLVMRKNLLKYVRVREFAPEAEFRDPCPSFIL 1863
            ++   +  LEFIK+VC   +LD N+ + V  + ++LL+ V V EF+ EA+FRDPC S++L
Sbjct: 2046 HLLLNNPALEFIKYVCKVLSLDTNITNQVNKLNRDLLRLVDVGEFSEEAQFRDPCRSYVL 2105

Query: 1864 PNVICSYCNDCRDLDLCRDM------ALLAQDWHCAMPQCGQPYDR--------EVMENA 1909
            P VIC  CN CRDLDLC+D       A+L Q W C+   C  PYD         EV++  
Sbjct: 2106 PEVICRSCNFCRDLDLCKDSSFSEDGAVLPQ-WLCS--NCQAPYDSSAIEMTLVEVLQKK 2162

Query: 1910 LLQIV-----------------RQRE----------RLYHLQDL---------------- 1926
            L+                    R+RE          R    Q L                
Sbjct: 2163 LMAFTLQDLKEADTPKCEEKERRKRELRSSATGRSCRGASEQRLGDAPSCRVVVHGVQAC 2222

Query: 1927 ----VCIRCNQVKAAHLAEQCACAGSFRCKEDASDFRSKMQIFLNIANRQGFQLLQECTS 1982
                VC++C  VK   +   C+CAG F        F  ++ IF NIA   G   L E   
Sbjct: 2223 RMEGVCLKCRGVKETSMPVYCSCAGDFALTIHTQVFMEQIGIFRNIAQHYGMSYLLETLE 2282

Query: 1983 WILE 1986
            W+L+
Sbjct: 2283 WLLQ 2286


>gi|332254127|ref|XP_003276181.1| PREDICTED: DNA polymerase epsilon catalytic subunit A, partial
            [Nomascus leucogenys]
          Length = 2316

 Score = 1438 bits (3722), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 732/1425 (51%), Positives = 986/1425 (69%), Gaps = 78/1425 (5%)

Query: 25   EELEAKLGYDLFSEGDKRLGWLLTFASSSLEDEDTRKVYSCIDLYFVSQDGSTFKSKYKF 84
            ++++ + G++   E  ++ GWL+    + + DED R V S +D YF+  DGS FK    +
Sbjct: 174  DKMDLRFGFERLKEPGEKTGWLINMHPTEILDEDKRLV-SAVDYYFIQDDGSRFKVALPY 232

Query: 85   RPYFYAATKEKMEMDVEAYLRRRYESQIADIEILEKEDLDLKNHLSGLHKSYLKISFDTV 144
            +PYFY AT++  E +V ++L ++++ +IA +E + KEDLDL NHL GL ++Y+K+SF TV
Sbjct: 233  KPYFYIATRKGCEREVSSFLSKKFQGKIAKVETVPKEDLDLPNHLVGLKRNYIKLSFHTV 292

Query: 145  QQLMDVKKDLLHVVERNQAKFDAAEAYESILTG------------KREQRPQDFLDCIVD 192
            + L+ V+K++   V++N+ +  A++AY ++L+             +  ++  D LD IVD
Sbjct: 293  EDLVKVRKEISPAVKKNREQDHASDAYTALLSSVLQRGSVITDEEETSKKIADQLDNIVD 352

Query: 193  LREYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLLE--KRVDLLQRAEVHVCAFDIETTK 250
            +REYDVPYHIR +ID  +    WY+V        +E  +R DL++R +  V AFDIETTK
Sbjct: 353  MREYDVPYHIRLSIDLKIHVAHWYNVRYRGNAFPVEITRRDDLVERPDPVVLAFDIETTK 412

Query: 251  LPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNVNNE 310
            LPLKFPDA+ D IMMISYM+DGQGYLI NRE V EDIED E+TPKPE+EG F V N  +E
Sbjct: 413  LPLKFPDAETDQIMMISYMIDGQGYLITNREIVSEDIEDFEFTPKPEYEGPFCVFNEPDE 472

Query: 311  IELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDKNQGECRA 370
              L++ WF H+QE KP I VTYNGD+FDWPF+E RAA HG  M +E+GFQ D +QGE +A
Sbjct: 473  AHLIQRWFEHVQETKPTIMVTYNGDFFDWPFVEARAAVHGLSMQQEIGFQKD-SQGEYKA 531

Query: 371  KFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQMMASYS 430
                H+DC  WVKRDSYLP GS  LKA  KAKLGYDP+E++PEDM R A E+PQ +A+YS
Sbjct: 532  PQCIHMDCLRWVKRDSYLPVGSHNLKAAAKAKLGYDPVELDPEDMCRMATEQPQTLATYS 591

Query: 431  VSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVICPNK 490
            VSDAVATYYLYM YVHPFIF+L TIIPM PDEVLRKGSGTLCE LLMVQA+ AN+I PNK
Sbjct: 592  VSDAVATYYLYMKYVHPFIFALCTIIPMEPDEVLRKGSGTLCEALLMVQAFHANIIFPNK 651

Query: 491  HQSDPEKFYRN-HLLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQLLNNLDRDLQ 549
             + +  K   + H+L+SETY+GGHVE LESGVFRSD+P  F+++P+A++ LL  +++ L+
Sbjct: 652  QEQEFNKLTDDGHVLDSETYVGGHVEALESGVFRSDIPCRFRMNPAAFDFLLQRVEKTLR 711

Query: 550  YAIKVEGKMDLESVSNYDEVKNAIMEKLLRLQEEPIREECPLIYHLDVAAMYPNIILTNR 609
            +AI+ E K+ +E V+N++EV + I  KL  L++ P R ECPLIYHLDV AMYPNIILTNR
Sbjct: 712  HAIEEEEKVPVEQVTNFEEVCDEIKSKLASLKDVPSRIECPLIYHLDVGAMYPNIILTNR 771

Query: 610  LQPPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYYHLKKQIESE-----F 664
            LQP ++V +  C ACDFN+PG  C RK+ W WRGE     RS+Y+ ++ Q+ESE     F
Sbjct: 772  LQPSAMVDEATCAACDFNKPGANCQRKMAWQWRGEFMPASRSEYHRIQHQLESEKFPPLF 831

Query: 665  VDGTNGHLSKSFLDLPKMEQQSRLKDRLKKYCQKAYKRVLDKPVTELREAGICMRENSFY 724
             +G     +++F +L + EQ    K RL  YC+KAYK++    V E R   IC RENSFY
Sbjct: 832  PEGP----ARAFHELSREEQAKYEKRRLADYCRKAYKKIHITKVEE-RLTTICQRENSFY 886

Query: 725  VDTVRSFRDRRYEYKGLNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHKCILNS 784
            VDTVR+FRDRRYE+KGL+KVWK KLS A   G++ +++  ++M VLYDS+QLAHKCILNS
Sbjct: 887  VDTVRAFRDRRYEFKGLHKVWKKKLSAAVEVGDAGEVKRCKNMEVLYDSMQLAHKCILNS 946

Query: 785  FYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLPGSFPE 844
             YGYVMRKGARWYSMEMAG+V +TGA II  AR LIE+IG+PLELDTDGIWCVLP SFPE
Sbjct: 947  LYGYVMRKGARWYSMEMAGIVCFTGANIITQARELIEQIGRPLELDTDGIWCVLPNSFPE 1006

Query: 845  NFTFKTKDLKK-KLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEFEVD 903
            NF FKT ++KK K+TISYP  MLN+ V    TNDQYQ L +P S TY T SE SI FEVD
Sbjct: 1007 NFVFKTTNVKKPKVTISYPGAMLNIMVKEGFTNDQYQELAEPSSLTYVTRSENSIFFEVD 1066

Query: 904  GPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFL 963
            GPY AMILPASKEEG  +KKRYAVFN+DG+LAELKGFE+KRRGEL+LIK+FQ+ +F+ FL
Sbjct: 1067 GPYLAMILPASKEEGKKLKKRYAVFNEDGSLAELKGFEVKRRGELQLIKIFQSSVFEAFL 1126

Query: 964  HGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLADYGEQKSCAV 1023
             GST+EE Y +VA VA+ WLD+L ++  ++ DSEL + ISE+ +MS+ L DYGEQKS ++
Sbjct: 1127 KGSTLEEVYGSVAKVADYWLDVLYSKAANMPDSELFELISENRSMSRKLEDYGEQKSTSI 1186

Query: 1024 TTARRLSDFLGDTMVKDKGLRCQYIVACEPQGTPVSERAVPVAIFETDAEIMKFYLRKWC 1083
            +TA+RL++FLGD MVKD GL C+YI++ +P+G+PV+ERA+P+AIF+ +  + K +LRKW 
Sbjct: 1187 STAKRLAEFLGDQMVKDAGLSCRYIISRKPEGSPVTERAIPLAIFQAEPTVRKHFLRKWL 1246

Query: 1084 KTSS--DVGIRSIVDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLYKKVREK 1141
            K+SS  D  IR+I+DW YY +RL SAIQKIITIPAA+Q++ NPVPRV HPDWL+KK+ EK
Sbjct: 1247 KSSSLQDFDIRAILDWDYYIERLGSAIQKIITIPAALQQIKNPVPRVKHPDWLHKKLLEK 1306

Query: 1142 EDKFRQRKLVDIFSSLKKDDFLNKTCNAETNLMDENVEDLEDFPKKRRNSVNGPRPIVRC 1201
             D ++Q+K+ ++F+   +         A  +    +  D+EDF       V  P P    
Sbjct: 1307 NDVYKQKKISELFTLEGRRQV--TMAEASEDSPRPSAPDMEDF-----GLVKLPHPAA-- 1357

Query: 1202 FEVNNEQKTVKTTDQVDSLRQQLEPS----EVSDQQPSSQNAIDTENIDRIVDYKGWLEL 1257
              V  ++K V    Q +S  Q L P+    E+  Q P    A+ T   + +V    WL  
Sbjct: 1358 -PVTVKRKRVLWESQEES--QDLTPTVPWQEILGQPP----ALGTTQEEWLV----WLWF 1406

Query: 1258 KKRKW----KDNLDRRKKQKL----GSLRASHQANGVSESLGDMINHKEAQRRTGVGSYF 1309
             K+KW    +  L RRK+Q+L    G LR +   +G +               TG+GS+ 
Sbjct: 1407 HKKKWQLQARQRLARRKRQRLESAEGVLRPAAIRDGPA---------------TGLGSFL 1451

Query: 1310 RRQETAMTRCHWQIIQLVPSSQSGVFLAWVVVEGIMVRIPITVPRLFYLNSKDPIVEKFP 1369
            RR   ++    WQI+Q+  +SQ+G+F  W ++   +  I +++PR+FY+N +    E+  
Sbjct: 1452 RRTARSILDLPWQIVQISETSQAGLFRLWALIGSDLHCIRLSIPRVFYVNQRVAKAEEGA 1511

Query: 1370 G-RRVNKTLPHGRRSFNLIEVMIDEDQFRKESKKLAALLADPEVE 1413
              R+VN+ LP     +NL E  + ED +++   ++ A L+ P++E
Sbjct: 1512 SYRKVNRVLPRSNVVYNLYEYSVPEDMYQEHINEINAELSAPDIE 1556



 Score =  261 bits (667), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 164/518 (31%), Positives = 261/518 (50%), Gaps = 77/518 (14%)

Query: 1442 LARYAHILWISDDGVPDLGGTSEEDECFA---DEVHQPVLTYPGAYRKVSVELKIHHLSV 1498
            L R+ H+LW+S    PDLGG   +D C     D+     +   G Y  V VEL + +L+V
Sbjct: 1809 LQRHNHLLWLSPTARPDLGGKEADDNCLVMEFDDQATVEINSSGCYSTVCVELDLQNLAV 1868

Query: 1499 NALLKSNQVNEMEGGGLFGFDQD----------MNSGPYNNELCGFDETTSSAPAFRVVK 1548
            N +L+S+ VN+MEG    G   D          +  G   +    +DET   +  FR++K
Sbjct: 1869 NTILQSHHVNDMEGADSMGISFDVIQQASLEDMITGGQAASAPASYDETALCSNTFRILK 1928

Query: 1549 QLIQRCLTDAVTSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEF 1608
             ++   + +     N++AD  + H YRWL SP S LHDP LHR LH +M+K+F  L+AEF
Sbjct: 1929 SMVVGWVKEITQYHNIYADNQVMHFYRWLRSPSSLLHDPALHRTLHNMMKKLFLQLIAEF 1988

Query: 1609 RKLGATIIFANFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLF 1668
            ++LG+++I+ANF+++I+ T K  +  A AY + +  ++ ++E+F  + +     W  LL+
Sbjct: 1989 KRLGSSVIYANFNRIILCTKKRRVEDAIAYVEYITSSIHSKEIFHSLTISFSRCWEFLLW 2048

Query: 1669 MDQYNYGGIPARADESLD---DDSQVD---------------------------IVSSWN 1698
            MD  NYGGI  +    +     DSQ                             + ++WN
Sbjct: 2049 MDPSNYGGIKGKVSSRIHCGLQDSQKAGGAEDEQENEDDGEEEEEVEESNVEDLLENNWN 2108

Query: 1699 IAEYLPK--EIQDHFVLVVSEFMYIPWKHAQKLAASRAS------LQEGSSCTPSITVAA 1750
            I ++LP+    Q++F+++VS ++   + H  K    R++       + G+S        A
Sbjct: 2109 ILQFLPQAASCQNYFLMIVSAYIVAVY-HCMKEGLRRSAPGSTPVRRRGASQLSQEAEGA 2167

Query: 1751 AENFESHIV---QYVKGEIS-SYFTGKLLSIVRDAIHHMKKMNNDQHNSPGVMQT----- 1801
            A      I     YV  E++ S+FT             ++K      NS  + +      
Sbjct: 2168 AGALPGMITFSQDYVANELTQSFFT---------ITQKIQKKVTGSRNSTELSEMFPVLP 2218

Query: 1802 AANIHKVDAPLEFIKHVCAAFALDQNVQHDVLVMRKNLLKYVRVREFAPEAEFRDPCPSF 1861
             +++   +  LEFIK+VC   +LD N+ + V  + ++LL+ V V EF+ EA+FRDPC S+
Sbjct: 2219 GSHLLLNNPALEFIKYVCKVLSLDTNITNQVNKLNRDLLRLVDVGEFSEEAQFRDPCCSY 2278

Query: 1862 ILPNVICSYCNDCRDLDLCRDM------ALLAQDWHCA 1893
            +LP VIC  CN CRDLDLC+D       A+L Q W C+
Sbjct: 2279 VLPEVICRSCNFCRDLDLCKDSSFSEDGAVLPQ-WLCS 2315


>gi|312922377|ref|NP_001100622.2| DNA polymerase epsilon catalytic subunit A [Rattus norvegicus]
          Length = 2283

 Score = 1437 bits (3721), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 728/1419 (51%), Positives = 976/1419 (68%), Gaps = 67/1419 (4%)

Query: 25   EELEAKLGYDLFSEGDKRLGWLLTFASSSLEDEDTRKVYSCIDLYFVSQDGSTFKSKYKF 84
            ++++ + G++   E  +R GWL+    + + DED R V S +D YF+  DGS FK    +
Sbjct: 42   DKMDLRFGFERLKEPGERTGWLINMHPTEILDEDKRLV-SAVDYYFIQDDGSRFKVALPY 100

Query: 85   RPYFYAATKEKMEMDVEAYLRRRYESQIADIEILEKEDLDLKNHLSGLHKSYLKISFDTV 144
            +PYFY A ++  + +V ++L ++++ +IA +E + KEDLDL NHL GL +SY+K+SF TV
Sbjct: 101  KPYFYIAARKGCDREVSSFLSKKFQGKIAKLENVPKEDLDLPNHLVGLKRSYIKLSFHTV 160

Query: 145  QQLMDVKKDLLHVVERNQAKFDAAEAYESILTG------------KREQRPQDFLDCIVD 192
            + L+ V+K++   V++N+ +  A++ Y ++L+             +  ++  D LD IVD
Sbjct: 161  EDLVKVRKEISPAVKKNREQDHASDEYTTMLSSILQGGSLITDEEETSKKIADQLDNIVD 220

Query: 193  LREYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLLE--KRVDLLQRAEVHVCAFDIETTK 250
            +REYDVPYHIR +ID  +    WY+V        +E  +R DL++R +  V AFDIETTK
Sbjct: 221  MREYDVPYHIRLSIDLRIHVAHWYNVRFRGNAFPVEIARRDDLVERPDPVVLAFDIETTK 280

Query: 251  LPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNVNNE 310
            LPLKFPDA+ D IMMISYM+DGQGYLI NRE V EDIED E+TPKPE+EG F V N  +E
Sbjct: 281  LPLKFPDAETDQIMMISYMIDGQGYLITNREIVSEDIEDFEFTPKPEYEGPFCVFNEPDE 340

Query: 311  IELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDKNQGECRA 370
            + L++ WF H+QE KP I VTYNGD+FDWPF+E RAA HG  M +E+GFQ D +QGE +A
Sbjct: 341  VHLIQRWFEHIQETKPTIMVTYNGDFFDWPFVEARAAIHGLSMYQEIGFQKD-SQGEYKA 399

Query: 371  KFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQMMASYS 430
                H+DC  WVKRDSYLP GS  LKA  KAKLGYDP+E++PEDM R A E+PQ +A+YS
Sbjct: 400  PQCIHMDCLRWVKRDSYLPVGSHNLKAAAKAKLGYDPVELDPEDMCRMATEQPQTLATYS 459

Query: 431  VSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVICPNK 490
            VSDAVATYYLYM YVHPFIF+L TIIPM PDEVLRKGSGTLCE LLMVQA+ AN+I PNK
Sbjct: 460  VSDAVATYYLYMKYVHPFIFALCTIIPMEPDEVLRKGSGTLCEALLMVQAFHANIIFPNK 519

Query: 491  HQSDPEKFYRN-HLLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQLLNNLDRDLQ 549
             + +  K   + H+L++ETY+GGHVE LESGVFRSD+P  F+++P+A++ LL  +++ ++
Sbjct: 520  QEQEFNKLTDDGHVLDAETYVGGHVEALESGVFRSDIPCRFRMNPAAFDFLLQRVEKTMR 579

Query: 550  YAIKVEGKMDLESVSNYDEVKNAIMEKLLRLQEEPIREECPLIYHLDVAAMYPNIILTNR 609
            +AI+ E K+ +E  +N+ EV   I  KL  L++ P R ECPLIYHLDV AMYPNIILTNR
Sbjct: 580  HAIEEEEKVPVEQATNFQEVCEQIKTKLTSLKDVPNRIECPLIYHLDVGAMYPNIILTNR 639

Query: 610  LQPPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYYHLKKQIESE-----F 664
            LQP +IV +  C ACDFN+PG TC RK+ W WRGE     RS+Y+ ++ Q+ESE     F
Sbjct: 640  LQPSAIVDEATCAACDFNKPGATCQRKMAWQWRGEFMPASRSEYHRIQHQLESEKFPPLF 699

Query: 665  VDGTNGHLSKSFLDLPKMEQQSRLKDRLKKYCQKAYKRVLDKPVTELREAGICMRENSFY 724
             +G     +++F +L + EQ    K RL  YC+KAYK++    V E R   IC RENSFY
Sbjct: 700  PEGP----ARAFHELSREEQAKYEKRRLADYCRKAYKKIHMTKVEE-RLTTICQRENSFY 754

Query: 725  VDTVRSFRDRRYEYKGLNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHKCILNS 784
            VDTVR+FRDRRYE+KGL+KVWK KLS A   G++ +++  ++M +LYDSLQLAHKCILNS
Sbjct: 755  VDTVRAFRDRRYEFKGLHKVWKKKLSAAVEVGDASEVKRCKNMEILYDSLQLAHKCILNS 814

Query: 785  FYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLPGSFPE 844
            FYGYVMRKGARWYSMEMAG+V +TGA II  AR LIE+IG+PLELDTDGIWCVLP SFPE
Sbjct: 815  FYGYVMRKGARWYSMEMAGIVCFTGANIITQARELIEQIGRPLELDTDGIWCVLPNSFPE 874

Query: 845  NFTFKTKDLKK-KLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEFEVD 903
            NF  KT ++KK KLTISYP  MLN+ V    TN QYQ L +P S TY T SE SI FEVD
Sbjct: 875  NFVIKTTNVKKPKLTISYPGAMLNIMVKEGFTNHQYQELTEPSSLTYVTRSENSIFFEVD 934

Query: 904  GPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFL 963
            GPY AMILPASKEEG  +KKRYAVFN+DG+LAELKGFE+KRRGEL+LIK+FQ+ +F+ FL
Sbjct: 935  GPYLAMILPASKEEGKKLKKRYAVFNEDGSLAELKGFEVKRRGELQLIKIFQSSVFEAFL 994

Query: 964  HGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLADYGEQKSCAV 1023
             GST+EE Y++VA VA+ WLD+L ++  ++ DSEL + ISE+ +MS+ L DYGEQKS ++
Sbjct: 995  KGSTLEEVYASVAKVADYWLDVLYSKAANMPDSELFELISENRSMSRKLEDYGEQKSTSI 1054

Query: 1024 TTARRLSDFLGDTMVKDKGLRCQYIVACEPQGTPVSERAVPVAIFETDAEIMKFYLRKWC 1083
            +TA+RL++FLGD MVKD GL C+YI++ +P+G+PV+ERA+P+AIF+ +  + K +LRKW 
Sbjct: 1055 STAKRLAEFLGDQMVKDAGLSCRYIISRKPEGSPVTERAIPLAIFQAEPTVRKHFLRKWL 1114

Query: 1084 KTSS--DVGIRSIVDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLYKKVREK 1141
            K+SS  D  IR+I+DW YY +RL SAIQKIITIPAA+Q+V NPVPRV HPDWL+KK+ EK
Sbjct: 1115 KSSSLQDFDIRTILDWDYYIERLGSAIQKIITIPAALQQVKNPVPRVKHPDWLHKKLLEK 1174

Query: 1142 EDKFRQRKLVDIFSSLKKDDFLNKTCNAETNLMDENVEDLEDF--PKKRRNSVNGPRPIV 1199
             D ++Q+K+ ++F    K   +     A  N +     D+EDF   K   ++V       
Sbjct: 1175 NDIYKQKKISELFVLEGKRQIV--MAQASENSLSLCTPDMEDFGLTKPYHSTVPVATKRK 1232

Query: 1200 RCFEVNNEQKTVKTTDQVDSLRQQLEPSEVSDQQPSSQNAIDTENIDRIVDYKGWLELKK 1259
            R +E   E + +  T         +   EV  Q PS    + T   + +V    WL+  K
Sbjct: 1233 RVWESQKESQDITLT---------VPWQEVLGQPPS----LGTTQEEWLV----WLQFHK 1275

Query: 1260 RKW----KDNLDRRKKQKLGSLRASHQANGVSESLGDMINHKEAQRRTGVGSYFRRQETA 1315
            +KW    +  L RRKKQ+L S     +   + E              TG+GS+ RR   +
Sbjct: 1276 KKWQLQAQQRLARRKKQRLESAEDMPRLGAIREGPA-----------TGLGSFLRRTARS 1324

Query: 1316 MTRCHWQIIQLVPSSQSGVFLAWVVVEGIMVRIPITVPRLFYLNSKDPIVEKFPG-RRVN 1374
            +    WQIIQ+  + Q+G+F  W ++   +  I +++PR+FY+N +    E  P  R+VN
Sbjct: 1325 IMDLPWQIIQISETRQAGLFRLWAIIGSDLHCIKLSIPRVFYVNQRVAKAEDGPSYRKVN 1384

Query: 1375 KTLPHGRRSFNLIEVMIDEDQFRKESKKLAALLADPEVE 1413
            + LP     +NL E  + ED +++   ++   L+ P++E
Sbjct: 1385 RALPRSNIVYNLYEYSVPEDMYQEHINEINTELSAPDIE 1423



 Score =  327 bits (839), Expect = 4e-86,   Method: Compositional matrix adjust.
 Identities = 194/605 (32%), Positives = 313/605 (51%), Gaps = 62/605 (10%)

Query: 1442 LARYAHILWISDDGVPDLGGTSEEDECFA---DEVHQPVLTYPGAYRKVSVELKIHHLSV 1498
            L R+ H+LW+S    PDLGG   +D       D+     +   G Y  V VEL I +L+V
Sbjct: 1676 LQRHNHLLWLSPTSRPDLGGKEADDNRLVMEFDDRATVEINNSGCYSTVCVELDIQNLAV 1735

Query: 1499 NALLKSNQVNEMEGGGLFG--FD-------QDMNSG-PYNNELCGFDETTSSAPAFRVVK 1548
            N +L+S+ VN+MEG G  G  FD       +DM +G    + L  +DET   +  FR++K
Sbjct: 1736 NTILQSHHVNDMEGAGSMGISFDVIQQASLEDMVTGNQAASALASYDETALCSSTFRILK 1795

Query: 1549 QLIQRCLTDAVTSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEF 1608
             ++   + +     N++AD  + H YRWL SP S LHDP LHR LH +M+K+F  L+AEF
Sbjct: 1796 SMVVGWVKEITQYHNIYADNQVMHFYRWLQSPCSLLHDPALHRTLHNMMKKLFLQLIAEF 1855

Query: 1609 RKLGATIIFANFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLF 1668
            ++LG+++I+ANF+++I+ T K  +  A AY + +  ++ ++E+F  + +     W  LL+
Sbjct: 1856 KRLGSSVIYANFNRIILCTKKRRIEDALAYVEYITNSIHSKEIFHSLTISFSRCWEFLLW 1915

Query: 1669 MDQYNYGGIPARADESL------DDDSQV--------------------------DIV-S 1695
            MD  NYGGI  +   S+      + DSQ                           D++ +
Sbjct: 1916 MDPSNYGGIKGKVPSSIHCGQVREQDSQTREETEDEEDNEKDEEEEEDMGQSEVEDLLEN 1975

Query: 1696 SWNIAEYLPK--EIQDHFVLVVSEFMYIPWKHAQ----KLAASRASLQEGSSCTPSITVA 1749
            +WNI ++LP+    Q +F+++VS ++   ++  +      A     ++   +   S    
Sbjct: 1976 NWNILQFLPQAASCQSYFLMIVSAYIVAVYQSMKDELRHSAPGSTPVKRKGASQFSQEAE 2035

Query: 1750 AAENFESHIVQYVKGEISSYFTGKLLSIVRDAIHHMKKMNNDQHNSPGVMQTAANIHKVD 1809
             A      ++ + +  +++  T    +I +     +    N    S        +   ++
Sbjct: 2036 GAAGALPGMITFSQDYVANELTQTFFTITQKIQKKVTGSRNTAEPSEMFPVLPGSHLLLN 2095

Query: 1810 AP-LEFIKHVCAAFALDQNVQHDVLVMRKNLLKYVRVREFAPEAEFRDPCPSFILPNVIC 1868
             P LEFIK+VC   +LD N+ + V  + ++LL+ V V EF+ EA+FRDPC S++LP VIC
Sbjct: 2096 NPALEFIKYVCKVLSLDTNITNQVNKLNRDLLRLVDVGEFSEEAQFRDPCHSYVLPEVIC 2155

Query: 1869 SYCNDCRDLDLCRDM------ALLAQDWHCAMPQCGQPYDREVMENALLQIVRQRERLYH 1922
              CN CRDLDLC+D       A+L Q W C+   C  PYD   +E+AL++ ++++   + 
Sbjct: 2156 HSCNFCRDLDLCKDSSFSQDGAILPQ-WLCS--NCQAPYDSSAIESALVEALQRKLMAFT 2212

Query: 1923 LQDLVCIRCNQVKAAHLAEQCACAGSFRCKEDASDFRSKMQIFLNIANRQGFQLLQECTS 1982
            LQDLVC++C  +K  H+   C CAG F        F  +++IF NIA       LQE   
Sbjct: 2213 LQDLVCLKCRGMKETHMPVYCGCAGDFVLTIHTEVFMEQIRIFQNIAKYYNMSYLQEAIE 2272

Query: 1983 WILEV 1987
            W+L+ 
Sbjct: 2273 WLLQT 2277


>gi|329744594|ref|NP_001178358.1| DNA polymerase epsilon catalytic subunit A [Bos taurus]
 gi|296478658|tpg|DAA20773.1| TPA: polymerase (DNA directed), epsilon [Bos taurus]
          Length = 2289

 Score = 1437 bits (3721), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 727/1436 (50%), Positives = 980/1436 (68%), Gaps = 62/1436 (4%)

Query: 8    RQDGRRTKKQKLIR----SAEEELEAKLGYDLFSEGDKRLGWLLTFASSSLEDEDTRKVY 63
            R DG  +    L R       ++++ + G++   E  ++ GWL+    + + DED R V 
Sbjct: 21   RDDGSSSSVSALKRLERSQWTDKMDLRFGFERLKEPGEKTGWLINMHPTEILDEDKRLV- 79

Query: 64   SCIDLYFVSQDGSTFKSKYKFRPYFYAATKEKMEMDVEAYLRRRYESQIADIEILEKEDL 123
            S +D YF+  DGS FK    ++PYFY AT++  E +V ++L ++++ +IA +E + KEDL
Sbjct: 80   SAVDYYFIQDDGSRFKVALPYKPYFYIATRKGCEREVSSFLSKKFQGKIAKVETVPKEDL 139

Query: 124  DLKNHLSGLHKSYLKISFDTVQQLMDVKKDLLHVVERNQAKFDAAEAYESILTG------ 177
            DL NHL GL ++Y+K+SF+TV+ L+ V+K++   V++N+ +   ++AY ++L+       
Sbjct: 140  DLPNHLVGLKRNYIKLSFNTVEDLVKVRKEISPAVKKNRDQSHTSDAYTTMLSSVLQGGS 199

Query: 178  ------KREQRPQDFLDCIVDLREYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLLE--K 229
                  +  ++  D LD IVD+REYDVPYHIR +ID  +    WY+V    +   +E  +
Sbjct: 200  VIFDEEETSKKIADQLDNIVDMREYDVPYHIRLSIDLKIHVAHWYNVRYRGSAFPVEIAR 259

Query: 230  RVDLLQRAEVHVCAFDIETTKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIED 289
            R DL++R +  V AFDIETTKLPLKFPDA+ D IMMISYM+DGQGYLI NRE V EDIED
Sbjct: 260  RDDLVERPDPVVLAFDIETTKLPLKFPDAETDQIMMISYMIDGQGYLITNREIVSEDIED 319

Query: 290  LEYTPKPEFEGYFKVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHH 349
             E+TPKPE+EG F V N  +E+ L++ WF H+QE KP I VTYNGD+FDWPF+E RAA H
Sbjct: 320  FEFTPKPEYEGPFCVFNEPDEVHLIQRWFEHIQEAKPTIMVTYNGDFFDWPFVEARAAVH 379

Query: 350  GFKMSEELGFQCDKNQGECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLE 409
            G  M +E+GFQ D +QGE ++    H+DC  WVKRDSYLP GS  LKA  KAKLGYDP+E
Sbjct: 380  GLSMYQEIGFQKD-SQGEYKSPQCIHMDCLRWVKRDSYLPVGSHNLKAAAKAKLGYDPVE 438

Query: 410  VNPEDMVRFAKEKPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSG 469
            ++PEDM R A E+PQ +A+YSVSDAVATYYLYM YVHPFIF+L TIIPM PDEVLRKGSG
Sbjct: 439  LDPEDMCRMATEQPQTLATYSVSDAVATYYLYMKYVHPFIFALCTIIPMEPDEVLRKGSG 498

Query: 470  TLCEMLLMVQAYKANVICPNKHQSDPEKFYRN-HLLESETYIGGHVECLESGVFRSDLPT 528
            TLCE LLMVQA+ AN+I PNK + +  K   + H+L++ETY+GGHVE LESGVFRSD+P 
Sbjct: 499  TLCEALLMVQAFHANIIFPNKQEQEFNKLTDDGHVLDAETYVGGHVEALESGVFRSDIPC 558

Query: 529  SFKLDPSAYEQLLNNLDRDLQYAIKVEGKMDLESVSNYDEVKNAIMEKLLRLQEEPIREE 588
             F+++P+A++ LL  +++ +++AI+ E K+ +E V N+ EV + I  KL  L++ P R E
Sbjct: 559  RFRMNPAAFDFLLQRVEKTMRHAIEEEEKVPMEQVINFQEVCDQIKTKLTSLKDVPNRIE 618

Query: 589  CPLIYHLDVAAMYPNIILTNRLQPPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEIFMG 648
            CPLIYHLDV AMYPNIILTNRLQP ++V +  C ACDFN+PG  C RK+ W WRGE    
Sbjct: 619  CPLIYHLDVGAMYPNIILTNRLQPSAMVDEATCAACDFNKPGANCQRKMAWQWRGEFMPA 678

Query: 649  KRSDYYHLKKQIESE-FVDGTNGHLSKSFLDLPKMEQQSRLKDRLKKYCQKAYKRVLDKP 707
             RS+Y+ ++ Q+ESE F   T    +++F +L + EQ    K RL  YC+KAYK++    
Sbjct: 679  SRSEYHRIQHQLESEKFPPLTPEGPARAFHELSREEQAKYEKRRLADYCRKAYKKIHVTK 738

Query: 708  VTELREAGICMRENSFYVDTVRSFRDRRYEYKGLNKVWKGKLSEAKASGNSIKIQEAQDM 767
            V E R   IC RENSFYVDTVR+FRDRRYE+KGL+KVWK KLS A   G++ +++  ++M
Sbjct: 739  VEE-RLTTICQRENSFYVDTVRAFRDRRYEFKGLHKVWKKKLSAAVEVGDAAEVKRCRNM 797

Query: 768  VVLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPL 827
             VLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAG+V +TGA II  AR LIE+IG+PL
Sbjct: 798  EVLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGIVCFTGANIITQARELIEQIGRPL 857

Query: 828  ELDTDGIWCVLPGSFPENFTFKTKDLKK-KLTISYPCVMLNVDVARNNTNDQYQTLVDPV 886
            ELDTDGIWCVLP SFPENF  KT ++KK K+TISYP  MLN+ V    TNDQYQ L +P 
Sbjct: 858  ELDTDGIWCVLPNSFPENFVIKTTNVKKPKVTISYPGAMLNIMVKEGFTNDQYQELAEPS 917

Query: 887  SKTYETHSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRG 946
            S TY T SE SI FEVDGPY AMILPASKEEG  +KKRYAVFN+DG+LAELKGFE+KRRG
Sbjct: 918  SLTYVTRSENSIFFEVDGPYLAMILPASKEEGKKLKKRYAVFNEDGSLAELKGFEVKRRG 977

Query: 947  ELKLIKVFQAELFDKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESS 1006
            EL+LIK+FQ+ +F+ FL GST+EE Y +VA VA+ WLD+L ++  ++ DSEL + ISE+ 
Sbjct: 978  ELQLIKIFQSSVFEAFLKGSTLEEVYGSVAKVADYWLDVLYSKAANMPDSELFELISENR 1037

Query: 1007 TMSKSLADYGEQKSCAVTTARRLSDFLGDTMVKDKGLRCQYIVACEPQGTPVSERAVPVA 1066
            +MS+ L DYGEQKS +++TA+RL++FLGD MVKD GL C+YI++ +P+G+PV+ERA+P+A
Sbjct: 1038 SMSRKLEDYGEQKSTSISTAKRLAEFLGDQMVKDAGLSCRYIISRKPEGSPVTERAIPLA 1097

Query: 1067 IFETDAEIMKFYLRKWCKTSS--DVGIRSIVDWSYYKQRLSSAIQKIITIPAAMQKVSNP 1124
            IF+ +  + K +LRKW K+SS  D  IR+I+DW YY +RL SAIQKIITIPAA+Q+V NP
Sbjct: 1098 IFQAEPTVRKHFLRKWLKSSSLQDFDIRTILDWDYYIERLGSAIQKIITIPAALQQVKNP 1157

Query: 1125 VPRVVHPDWLYKKVREKEDKFRQRKLVDIFSSLKKDDFLNKTCNAETNLMDENVEDLEDF 1184
            VPRV HPDWL+KK+ EK D ++Q+K+ ++F    K         A          D+EDF
Sbjct: 1158 VPRVKHPDWLHKKLLEKNDVYKQKKISELFVLEGKRQV--GMAQASEGSQSLGSPDMEDF 1215

Query: 1185 PKKRRNSVNGPRPIVRCFEVNNEQKTVKTTDQVDS--LRQQLEPSEVSDQQPSSQNAIDT 1242
                       +P      +  ++K +    Q  S  L   +   EV  Q P    A+ T
Sbjct: 1216 --------GLTKPPHSAVPIATKRKRIHCERQEGSQDLELTMPWQEVLGQPP----ALGT 1263

Query: 1243 ENIDRIVDYKGWLELKKRKW----KDNLDRRKKQKLGSLRASHQANGVSESLGDMINHKE 1298
               + +V    WL+  K+KW    +  L  +K+++L     + +   + E          
Sbjct: 1264 TQEEWLV----WLQFHKKKWQLQAQQRLAHKKRRRLEGAEGTPRPGAIREGPS------- 1312

Query: 1299 AQRRTGVGSYFRRQETAMTRCHWQIIQLVPSSQSGVFLAWVVVEGIMVRIPITVPRLFYL 1358
                TG+G +FRR   ++    WQI+Q+  +SQ+G+F  W V+   +  I + +PR+FY+
Sbjct: 1313 ----TGLGGFFRRTARSILDLPWQIVQISETSQAGLFRVWAVIGSDLHCIKLNIPRVFYV 1368

Query: 1359 NSKDPIVEKFPG-RRVNKTLPHGRRSFNLIEVMIDEDQFRKESKKLAALLADPEVE 1413
            N +    E+ P  R+VN+ LP     +NL E  + ED +++   ++   LA P++E
Sbjct: 1369 NQRVAKAEEGPSYRKVNRVLPRSNMVYNLYEYSVPEDMYQEHINEINTELAAPDIE 1424



 Score =  313 bits (801), Expect = 8e-82,   Method: Compositional matrix adjust.
 Identities = 198/617 (32%), Positives = 310/617 (50%), Gaps = 87/617 (14%)

Query: 1442 LARYAHILWISDDGVPDLGGTSEEDECFADEV--HQPV-LTYPGAYRKVSVELKIHHLSV 1498
            L R+ H+LW+S    PDLGG   +D     E     PV +   G Y  V VEL I +L+V
Sbjct: 1677 LQRHNHLLWLSPTSRPDLGGKEADDNRLVMEFDDQAPVEINSSGCYSTVCVELDIQNLAV 1736

Query: 1499 NALLKSNQVNEMEGGGLFG--FD-------QDMNSG-PYNNELCGFDETTSSAPAFRVVK 1548
            N +L+S+ VN+MEG    G  FD       +DM +G    +    +DET   +  FR++K
Sbjct: 1737 NTILQSHHVNDMEGADSIGISFDVIQQASLEDMITGNQAASAPASYDETALCSNTFRILK 1796

Query: 1549 QLIQRCLTDAVTSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEF 1608
             ++   + +     NV+AD  + H YRWL SP S LHDP LHR LH +M+K+F  L+AEF
Sbjct: 1797 SMVVGWVKEITQYRNVYADNQVMHFYRWLRSPSSLLHDPALHRTLHSMMKKLFLQLIAEF 1856

Query: 1609 RKLGATIIFANFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLF 1668
            ++LG+++++ANF+++I+ T K  +  A AY + +  ++ ++E+F  + +     W  LL+
Sbjct: 1857 KRLGSSVVYANFNRIILCTKKRRVEDALAYVEYITNSIHSKEIFHSLTISFSRCWEFLLW 1916

Query: 1669 MDQYNYGGI----PARADESLDD----------------------------------DSQ 1690
            MD  NYGGI    P+R      D                                  D +
Sbjct: 1917 MDPSNYGGIKGTVPSRIHCGQQDSPEEGRAQQGEPEEEEDEDEEEEEEEDEGGTQELDVE 1976

Query: 1691 VDIVSSWNIAEYLPK--EIQDHFVLVVSEFMYIPWKHAQKLAASRASLQEGSSCTPSITV 1748
              + ++WNI ++LP+    Q +F+++VS ++         +A   +  +E    TP  T 
Sbjct: 1977 DLLENNWNILQFLPQAASCQSYFLMIVSAYI---------VAVYHSMKEELRRSTPGSTP 2027

Query: 1749 AAAENFESHIVQYVKGEISS----------YFTGKLLSIVRDAIHHMKKMNNDQHNSPGV 1798
                   S + Q  +GE  +          Y   +L          ++K      NS  +
Sbjct: 2028 VRRRG-ASQLSQEAQGEAGALPGMITFSQDYVANELTQNFFTITQKIQKKVTGSRNSTEL 2086

Query: 1799 MQT-----AANIHKVDAPLEFIKHVCAAFALDQNVQHDVLVMRKNLLKYVRVREFAPEAE 1853
             +       +++   +  LEFIK+VC   +LD N+ + V  + ++LL+ V V EF+ EA+
Sbjct: 2087 SEMFPVLPGSHLLLNNPALEFIKYVCKVLSLDTNITNQVNKLTRDLLRLVDVGEFSEEAQ 2146

Query: 1854 FRDPCPSFILPNVICSYCNDCRDLDLCRDMALLAQD------WHCAMPQCGQPYDREVME 1907
            FRDPC S++LP VIC  CN CRDLDLC+D +  +QD      W C+   C   YD  V+E
Sbjct: 2147 FRDPCRSYVLPEVICHNCNFCRDLDLCKDPS-FSQDGTVLPQWLCS--NCQVAYDSSVIE 2203

Query: 1908 NALLQIVRQRERLYHLQDLVCIRCNQVKAAHLAEQCACAGSFRCKEDASDFRSKMQIFLN 1967
             AL++ ++++   + LQDLVC++C  VK  ++A  C+CAG F        F  ++ IF N
Sbjct: 2204 MALVEALQKKLMAFTLQDLVCLKCRGVKETNMAVYCSCAGGFSLTIHTKVFMEQIGIFQN 2263

Query: 1968 IANRQGFQLLQECTSWI 1984
            IA   G   L+E   W+
Sbjct: 2264 IAQHYGMSYLKETLDWL 2280


>gi|355564841|gb|EHH21341.1| hypothetical protein EGK_04379, partial [Macaca mulatta]
          Length = 2268

 Score = 1437 bits (3720), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 737/1445 (51%), Positives = 989/1445 (68%), Gaps = 77/1445 (5%)

Query: 8    RQDGRRTKKQKLIR----SAEEELEAKLGYDLFSEGDKRLGWLLTFASSSLEDEDTRKVY 63
            R DG  +    L R       ++++ + G++   E  ++ GWL+    + + DED R V 
Sbjct: 1    RDDGATSSVSALKRLERSQWTDKMDLRFGFERLKEPGEKTGWLINMHPTEILDEDKRLV- 59

Query: 64   SCIDLYFVSQDGSTFKSKYKFRPYFYAATKEKMEMDVEAYLRRRYESQIADIEILEKEDL 123
            S +D YF+  DGS FK    ++PYFY AT++  E +V ++L ++++ +IA +E + KEDL
Sbjct: 60   SAVDYYFIQDDGSRFKVALPYKPYFYIATRKGCEREVSSFLSKKFQGKIAKVETVPKEDL 119

Query: 124  DLKNHLSGLHKSYLKISFDTVQQLMDVKKDLLHVVERNQAKFDAAEAYESILTG------ 177
            DL NHL GL ++Y+K+SF TV+ L+ V+K++   V++N+ +  A++AY ++L+       
Sbjct: 120  DLPNHLVGLKRNYIKLSFHTVEDLVKVRKEISPAVKKNREQDHASDAYTALLSSVLQRGG 179

Query: 178  ------KREQRPQDFLDCIVDLREYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLLE--K 229
                  +  ++  D LD IVD+REYDVPYHIR +ID  +    WY+V        +E  +
Sbjct: 180  VITDEEETSKKIADQLDNIVDMREYDVPYHIRLSIDLKIHVAHWYNVRYRGNAFPVEITR 239

Query: 230  RVDLLQRAEVHVCAFDIETTKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIED 289
            R DL++R +  V AFDIETTKLPLKFPDA+ D IMMISYM+DGQGYLI NRE V EDIED
Sbjct: 240  RDDLVERPDPVVLAFDIETTKLPLKFPDAETDQIMMISYMIDGQGYLITNREIVSEDIED 299

Query: 290  LEYTPKPEFEGYFKVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHH 349
             E+TPKPE+EG F V N  +E  L++ WF H+QE KP I VTYNGD+FDWPF+E RAA H
Sbjct: 300  FEFTPKPEYEGPFCVFNEPDEAHLIQRWFEHVQETKPTIMVTYNGDFFDWPFVEARAAVH 359

Query: 350  GFKMSEELGFQCDKNQGECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLE 409
            G  M +E+GFQ D +QGE +A    H+DC  WVKRDSYLP GS  LKA  KAKLGYDP+E
Sbjct: 360  GLSMQQEIGFQKD-SQGEYKAPQCIHMDCLRWVKRDSYLPVGSHNLKAAAKAKLGYDPVE 418

Query: 410  VNPEDMVRFAKEKPQ---MMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRK 466
            ++PEDM R A E+PQ    +A+YSVSDAVATYYLYM YVHPFIF+L TIIPM PDEVLRK
Sbjct: 419  LDPEDMCRMATEQPQARKTLATYSVSDAVATYYLYMKYVHPFIFALCTIIPMEPDEVLRK 478

Query: 467  GSGTLCEMLLMVQAYKANVICPNKHQSDPEKFYRN-HLLESETYIGGHVECLESGVFRSD 525
            GSGTLCE LLMVQA+ AN+I PNK + +  K   + H+L+SETY+GGHVE LESGVFRSD
Sbjct: 479  GSGTLCEALLMVQAFHANIIFPNKQEQEFNKLTDDGHVLDSETYVGGHVEALESGVFRSD 538

Query: 526  LPTSFKLDPSAYEQLLNNLDRDLQYAIKVEGKMDLESVSNYDEVKNAIMEKLLRLQEEPI 585
            +P  F+++P+A++ LL  +++ L++AI+ E K+ +E V+N++EV + I  KL  L++ P 
Sbjct: 539  IPCRFRMNPAAFDFLLQRVEKTLRHAIEEEEKVPVEQVTNFEEVCDEIKSKLASLKDVPS 598

Query: 586  REECPLIYHLDVAAMYPNIILTNRLQPPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEI 645
            R ECPLIYHLDV AMYPNIILTNRLQP ++V +  C ACDFN+PG  C RK+ W WRGE 
Sbjct: 599  RIECPLIYHLDVGAMYPNIILTNRLQPSAMVDEATCAACDFNKPGANCQRKMAWQWRGEF 658

Query: 646  FMGKRSDYYHLKKQIESE-----FVDGTNGHLSKSFLDLPKMEQQSRLKDRLKKYCQKAY 700
                RS+Y+ ++ Q+ESE     F +G     +++F +L + EQ    K RL  YC+KAY
Sbjct: 659  MPASRSEYHRIQHQLESEKFPALFPEGP----ARAFHELSREEQAKYEKRRLADYCRKAY 714

Query: 701  KRVLDKPVTELREAGICMRENSFYVDTVRSFRDRRYEYKGLNKVWKGKLSEAKASGNSIK 760
            K++    V E R   IC RENSFYVDTVR+FRDRRYE+KGL+KVWK KLS A   G++ +
Sbjct: 715  KKIHITKVEE-RLTTICQRENSFYVDTVRAFRDRRYEFKGLHKVWKKKLSAAVEVGDAAE 773

Query: 761  IQEAQDMVVLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLI 820
            ++  ++M VLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAG+V +TGA II  AR LI
Sbjct: 774  VKRCKNMEVLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGIVCFTGANIITQARELI 833

Query: 821  EKIGKPLELDTDGIWCVLPGSFPENFTFKTKDLKK-KLTISYPCVMLNVDVARNNTNDQY 879
            E+IG+PLELDTDGIWCVLP SFPENF FKT + KK K+TISYP  MLN+ V    TNDQY
Sbjct: 834  EQIGRPLELDTDGIWCVLPNSFPENFVFKTTNAKKPKVTISYPGAMLNIMVKEGFTNDQY 893

Query: 880  QTLVDPVSKTYETHSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKG 939
            Q L +P S TY T SE SI FEVDGPY AMILPASKEEG  +KKRYAVFN+DG+LAELKG
Sbjct: 894  QELAEPSSLTYVTRSENSIFFEVDGPYLAMILPASKEEGKKLKKRYAVFNEDGSLAELKG 953

Query: 940  FEIKRRGELKLIKVFQAELFDKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELI 999
            FE+KRRGEL+LIK+FQ+ +F+ FL GST+EE Y +VA VA+ WLD+L ++  ++ DSEL 
Sbjct: 954  FEVKRRGELQLIKIFQSSVFEAFLKGSTLEEVYGSVAKVADYWLDVLYSKAANMPDSELF 1013

Query: 1000 DYISESSTMSKSLADYGEQKSCAVTTARRLSDFLGDTMVKDKGLRCQYIVACEPQGTPVS 1059
            + ISE+ +MS+ L DYGEQKS +++TA+RL++FLGD MVKD GL C+YI++ +P+G+PV+
Sbjct: 1014 ELISENRSMSRKLEDYGEQKSTSISTAKRLAEFLGDQMVKDAGLSCRYIISRKPEGSPVT 1073

Query: 1060 ERAVPVAIFETDAEIMKFYLRKWCKTSS--DVGIRSIVDWSYYKQRLSSAIQKIITIPAA 1117
            ERA+P+AIF+ +  + K +LRKW K+SS  D  IR+I+DW YY +RL SAIQKIITIPAA
Sbjct: 1074 ERAIPLAIFQAEPMVRKHFLRKWLKSSSLQDFDIRAILDWDYYIERLGSAIQKIITIPAA 1133

Query: 1118 MQKVSNPVPRVVHPDWLYKKVREKEDKFRQRKLVDIFSSLKKDDFLNKTCNAETNLMDEN 1177
            +Q+V NPVPRV HPDWL+KK+ EK D ++Q+K+ ++F+   +         A  +    +
Sbjct: 1134 LQQVKNPVPRVKHPDWLHKKLLEKNDVYKQKKISELFTLEGRRQV--TMAEASEDSPRPS 1191

Query: 1178 VEDLEDFPKKRRNSVNGPRPIVRCFEVNNEQKTVKTTDQVDSLRQQLEPS----EVSDQQ 1233
              D+EDF       V  P P      V  ++K V    Q +S  Q L P+    E+  Q 
Sbjct: 1192 APDMEDF-----GLVKSPHPAA---PVAVKRKRVLWESQEES--QDLTPTVPWQEILGQP 1241

Query: 1234 PSSQNAIDTENIDRIVDYKGWLELKKRKW----KDNLDRRKKQKLGSLRASHQANGVSES 1289
            P    A+ T   + +V    WL   K+KW    +  L RRK+Q+L S     +   + + 
Sbjct: 1242 P----ALGTTQEEWLV----WLRFHKKKWQLQARQRLARRKRQRLESAEGVLRPGAIRDG 1293

Query: 1290 LGDMINHKEAQRRTGVGSYFRRQETAMTRCHWQIIQLVPSSQSGVFLAWVVVEGIMVRIP 1349
                         TG+GS+ RR   ++    WQI+Q+  +SQ+G+F  W ++   +  I 
Sbjct: 1294 PA-----------TGLGSFLRRTARSILDLPWQIVQISETSQAGLFRLWALIGSDLHCIR 1342

Query: 1350 ITVPRLFYLNSKDPIVEKFPG-RRVNKTLPHGRRSFNLIEVMIDEDQFRKESKKLAALLA 1408
            +++PR+FY+N +    E+    R+VN+ LP     +NL E  + ED +++   ++ A L+
Sbjct: 1343 LSIPRVFYVNQRVAKAEEGTSYRKVNRVLPRSNVVYNLYEYSVPEDMYQEHINEINAELS 1402

Query: 1409 DPEVE 1413
             P++E
Sbjct: 1403 APDIE 1407



 Score =  320 bits (820), Expect = 5e-84,   Method: Compositional matrix adjust.
 Identities = 194/616 (31%), Positives = 308/616 (50%), Gaps = 84/616 (13%)

Query: 1442 LARYAHILWISDDGVPDLGGTSEEDECFA---DEVHQPVLTYPGAYRKVSVELKIHHLSV 1498
            L R+ H+LW+S    PDLGG   +D C     D+     +   G Y  V VEL + +L+V
Sbjct: 1660 LHRHNHLLWLSPTARPDLGGKEADDNCLVMEFDDQATVEINSSGCYSTVCVELDLQNLAV 1719

Query: 1499 NALLKSNQVNEMEGGGLFGFDQD----------MNSGPYNNELCGFDETTSSAPAFRVVK 1548
            N +L+S+ VN+MEG    G   D          +  G   +    +DET   +  FR++K
Sbjct: 1720 NTILQSHHVNDMEGADSMGISFDVIQQASLEDMITGGQAASAPASYDETALCSNTFRILK 1779

Query: 1549 QLIQRCLTDAVTSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEF 1608
             ++   + +     N++AD  + H YRWL SP S LHDP LHR LH +M+K+F  L+ EF
Sbjct: 1780 SMVVGWVKEITQYHNIYADNQVMHFYRWLRSPSSLLHDPALHRTLHNMMKKLFLQLITEF 1839

Query: 1609 RKLGATIIFANFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLF 1668
            ++LG+++++ANF+++I+ T K  +  A AY + +  ++  +E+F  + +     W  LL+
Sbjct: 1840 KRLGSSVVYANFNRIILCTKKRRVEDAIAYVEYITSSIHAKEIFHSLTISFSRCWEFLLW 1899

Query: 1669 MDQYNYGGI----PARADESLDDDSQV-------------------------------DI 1693
            MD  NYGGI     +R    L D  +V                                +
Sbjct: 1900 MDPSNYGGIKGKVSSRVHHGLQDSQKVQGAEDEQENEDNEEERNGEEEEDAEESSVEDSL 1959

Query: 1694 VSSWNIAEYLPK--EIQDHFVLVVSEFMYIPWKHAQKLAASRAS------LQEGSSCTPS 1745
             ++WNI ++LP+    Q +F+++VS ++   + H  K    R++       + G+S    
Sbjct: 1960 ENNWNILQFLPQAASCQSYFLMIVSAYIVAVY-HCMKDGLRRSAPGSTPVRRRGASQLSQ 2018

Query: 1746 ITVAAAENFESHIV---QYVKGEIS-SYFTGKLLSIVRDAIHHMKKMNNDQHNSPGVMQT 1801
                AA      I     YV  E++ S+FT             ++K      NS  + + 
Sbjct: 2019 EAEGAAGALPGMITFSQDYVANELTQSFFT---------ITQKIQKKVTGSRNSTELSEM 2069

Query: 1802 -----AANIHKVDAPLEFIKHVCAAFALDQNVQHDVLVMRKNLLKYVRVREFAPEAEFRD 1856
                  +++   +  LEFIK+VC   +LD N+ + V  + ++LL+ V V EF+ EA+FRD
Sbjct: 2070 FPVLPGSHLLLNNPALEFIKYVCKVLSLDTNITNQVNKLNRDLLRLVDVGEFSEEAQFRD 2129

Query: 1857 PCPSFILPNVICSYCNDCRDLDLCRDM------ALLAQDWHCAMPQCGQPYDREVMENAL 1910
            PC S++LP VIC  CN CRDLDLC+D       A+L Q W C+   C  PYD  V+E  L
Sbjct: 2130 PCRSYVLPEVICRSCNFCRDLDLCKDSSFSEDGAVLPQ-WLCS--NCQAPYDSSVIEMTL 2186

Query: 1911 LQIVRQRERLYHLQDLVCIRCNQVKAAHLAEQCACAGSFRCKEDASDFRSKMQIFLNIAN 1970
            +++++++   + LQDL+C++C  VK   +   C+CAG F        F  ++ IF NIA 
Sbjct: 2187 VEVLQKKLMAFTLQDLICLKCRGVKETSMPVYCSCAGGFALTIHTQVFMEQIGIFRNIAQ 2246

Query: 1971 RQGFQLLQECTSWILE 1986
              G   L E   W+L+
Sbjct: 2247 HYGMSYLLETLEWLLQ 2262


>gi|403292268|ref|XP_003937175.1| PREDICTED: DNA polymerase epsilon catalytic subunit A [Saimiri
            boliviensis boliviensis]
          Length = 2293

 Score = 1436 bits (3717), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 729/1421 (51%), Positives = 980/1421 (68%), Gaps = 70/1421 (4%)

Query: 25   EELEAKLGYDLFSEGDKRLGWLLTFASSSLEDEDTRKVYSCIDLYFVSQDGSTFKSKYKF 84
            ++++ + G++   E  ++ GWL+    + + DED R V S +D YF+  DGS FK    +
Sbjct: 50   DKMDLRFGFERLKEPGEKTGWLINMHPTEILDEDKRLV-SAVDYYFIQDDGSRFKVALPY 108

Query: 85   RPYFYAATKEKMEMDVEAYLRRRYESQIADIEILEKEDLDLKNHLSGLHKSYLKISFDTV 144
            +PYFY AT++  E +V ++L ++++ +IA +E + KEDLDL NHL GL ++Y+++SF TV
Sbjct: 109  KPYFYIATRKGCEREVSSFLSKKFQGKIAKVETVPKEDLDLPNHLVGLKRNYIRLSFHTV 168

Query: 145  QQLMDVKKDLLHVVERNQAKFDAAEAYESILTG------------KREQRPQDFLDCIVD 192
            + L+ V+K++   V++N+ +  A++ Y ++L+             +  ++  D LD IVD
Sbjct: 169  EDLVKVRKEIFPAVKKNREQDHASDTYTAMLSSVLQRSSVITDEEEASKKITDQLDDIVD 228

Query: 193  LREYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLLE--KRVDLLQRAEVHVCAFDIETTK 250
            +REYDVPYHIR +ID  +    WY+V        +E  +R DL++R +  V AFDIETTK
Sbjct: 229  MREYDVPYHIRLSIDLKIHVAHWYNVRYRGNAFPVEITRRDDLVERPDPVVLAFDIETTK 288

Query: 251  LPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNVNNE 310
            LPLKFPDA+ D IMMISYM+DGQGYLI NRE V EDIED E+TPKPE+EG F V N  +E
Sbjct: 289  LPLKFPDAETDQIMMISYMIDGQGYLITNREIVSEDIEDFEFTPKPEYEGPFCVFNEPDE 348

Query: 311  IELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDKNQGECRA 370
              L++ WF H+QE KP + VTYNGD+FDWPF+E RAA HG  M +E+GFQ D +QGE +A
Sbjct: 349  AHLIQRWFEHIQETKPTVMVTYNGDFFDWPFVEARAAVHGLSMQQEIGFQKD-SQGEYKA 407

Query: 371  KFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQMMASYS 430
                H+DC  WVKRDSYLP GS  LKA  KAKLGYDP+E++PEDM R A E+PQ +A+YS
Sbjct: 408  PQCIHMDCLRWVKRDSYLPVGSHNLKAAAKAKLGYDPVELDPEDMCRMATEQPQTLATYS 467

Query: 431  VSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVICPNK 490
            VSDAVATYYLYM YVHPFIF+L TIIPM PDEVLRKGSGTLCE LLMVQA+ AN+I PNK
Sbjct: 468  VSDAVATYYLYMKYVHPFIFALCTIIPMEPDEVLRKGSGTLCEALLMVQAFHANIIFPNK 527

Query: 491  HQSDPEKFYRN-HLLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQLLNNLDRDLQ 549
             + +  K   + H+L+SETY+GGHVE LESGVFRSD+P  F+++P+A++ LL  +++ L+
Sbjct: 528  QEQEFNKLTDDGHVLDSETYVGGHVEALESGVFRSDIPCRFRMNPAAFDFLLQRVEKTLR 587

Query: 550  YAIKVEGKMDLESVSNYDEVKNAIMEKLLRLQEEPIREECPLIYHLDVAAMYPNIILTNR 609
            +AI+ E K+ +E V+N+ E+   I  KL  L+E P R ECPLIYHLDV AMYPNIILTNR
Sbjct: 588  HAIEEEEKVPVEQVTNFQELCEQIKSKLASLKEVPNRIECPLIYHLDVGAMYPNIILTNR 647

Query: 610  LQPPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYYHLKKQIESE-----F 664
            LQP ++V +  C ACDFN+PG  C RK+ W WRGE     RS+Y+ ++ Q+ESE     F
Sbjct: 648  LQPSAMVDEATCAACDFNKPGANCQRKMAWQWRGEFMPASRSEYHRIQHQLESEKFPALF 707

Query: 665  VDGTNGHLSKSFLDLPKMEQQSRLKDRLKKYCQKAYKRVLDKPVTELREAGICMRENSFY 724
             +G     +++F +L + EQ    K RL  YC+KAYK++    V E R   IC RENSFY
Sbjct: 708  PEGP----ARAFHELSREEQAKYEKRRLADYCRKAYKKIHITKVEE-RLTTICQRENSFY 762

Query: 725  VDTVRSFRDRRYEYKGLNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHKCILNS 784
            VDTVR+FRDRRYE+KGL+KVWK KLS A   G++ +++  ++M VLYDSLQLAHKCILNS
Sbjct: 763  VDTVRAFRDRRYEFKGLHKVWKKKLSAAVEVGDAAEVKRCKNMEVLYDSLQLAHKCILNS 822

Query: 785  FYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLPGSFPE 844
            FYGYVMRKGARWYSMEMAG+V +TGA II  AR LIE+IG+PLELDTDGIWCVLP SFPE
Sbjct: 823  FYGYVMRKGARWYSMEMAGIVCFTGANIITQARELIEQIGRPLELDTDGIWCVLPNSFPE 882

Query: 845  NFTFKTKDLKK-KLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEFEVD 903
            NF FKT ++KK K+TISYP  MLN+ V    TNDQYQ L +P S TY T SE SI FEVD
Sbjct: 883  NFVFKTTNVKKPKVTISYPGAMLNLMVKEGFTNDQYQELAEPSSLTYVTRSENSIFFEVD 942

Query: 904  GPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFL 963
            GPY AMILPASKEEG  +KKRYAVFN+DG+LAELKGFE+KRRGEL+LIK+FQ+ +F+ FL
Sbjct: 943  GPYLAMILPASKEEGKKLKKRYAVFNEDGSLAELKGFEVKRRGELQLIKIFQSSVFEAFL 1002

Query: 964  HGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLADYGEQKSCAV 1023
             GST+EE Y++VA VA+ WLD+L ++  ++ DSEL + ISE+ +MS+ L DYGEQKS ++
Sbjct: 1003 KGSTLEEVYASVAKVADYWLDVLYSKAANMPDSELFELISENRSMSRKLEDYGEQKSTSI 1062

Query: 1024 TTARRLSDFLGDTMVKDKGLRCQYIVACEPQGTPVSERAVPVAIFETDAEIMKFYLRKWC 1083
            +TA+RL++FLGD MVKD GL C+YI++ +P+G+PV+ERA+P+AIF+ +  + K +LRKW 
Sbjct: 1063 STAKRLAEFLGDQMVKDAGLSCRYIISRKPEGSPVTERAIPLAIFQAEPTVRKHFLRKWL 1122

Query: 1084 KTSS--DVGIRSIVDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLYKKVREK 1141
            K+SS  D  IR+I+DW YY +RL SAIQKIITIPAA+Q+V NPVPRV HPDWL+KK+ EK
Sbjct: 1123 KSSSLQDFDIRAILDWDYYIERLGSAIQKIITIPAALQQVKNPVPRVKHPDWLHKKLLEK 1182

Query: 1142 EDKFRQRKLVDIFSSLKKDDFLNKTCNAETNLMDENVEDLEDFPKKRRNSVNGPRPIVRC 1201
             D ++Q+K+ ++F+   +   +     A  +    +  D+EDF       V  P P    
Sbjct: 1183 NDVYKQKKISELFTLEGRRQVM--MAQAPGDSPRPSAPDMEDF-----GLVKPPHPPA-- 1233

Query: 1202 FEVNNEQKTVKTTDQVDSLRQQLEPS----EVSDQQPSSQNAIDTENIDRIVDYKGWLEL 1257
              V  ++K V    Q +S  Q L P+    E+  Q P    A+ T   + +V    WL  
Sbjct: 1234 -HVAVKRKRVLWESQEES--QDLMPTVPWQEILGQPP----ALGTTQEEWLV----WLRF 1282

Query: 1258 KKRKW----KDNLDRRKKQKLGSLRASHQANGVSESLGDMINHKEAQRRTGVGSYFRRQE 1313
             K+KW    +  L RRK+Q+L S     +   V +              TG+GS+ RR  
Sbjct: 1283 HKKKWQLQARQRLARRKRQRLESADGVLRPGAVRDGPA-----------TGLGSFLRRTA 1331

Query: 1314 TAMTRCHWQIIQLVPSSQSGVFLAWVVVEGIMVRIPITVPRLFYLNSKDPIVEKFPG-RR 1372
             ++    WQI+Q+  +SQ G+F  W ++   +  I +++PR+FY+N +    E+    R+
Sbjct: 1332 RSILDLPWQIVQISETSQPGLFRLWALIGSDLHCIRLSIPRVFYVNQRVAKAEEGASYRK 1391

Query: 1373 VNKTLPHGRRSFNLIEVMIDEDQFRKESKKLAALLADPEVE 1413
            VN+ LP     +NL E  + ED ++    ++   L+ P++E
Sbjct: 1392 VNRVLPRSNVVYNLYEYSVPEDMYQDHINEINTELSAPDIE 1432



 Score =  309 bits (791), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 188/614 (30%), Positives = 303/614 (49%), Gaps = 81/614 (13%)

Query: 1442 LARYAHILWISDDGVPDLGGTSEEDECFA---DEVHQPVLTYPGAYRKVSVELKIHHLSV 1498
            L R+ H+LW+S    PDLGG   +D       D+     +   G Y  V +EL + +L+V
Sbjct: 1685 LQRHNHLLWLSPTARPDLGGKEADDNRLVMEFDDQATVEINSSGCYSTVCMELDLQNLAV 1744

Query: 1499 NALLKSNQVNEMEGGGLFGFDQD----------MNSGPYNNELCGFDETTSSAPAFRVVK 1548
            N +L+S+ VN+MEG    G   D          +  G   +    +DE    +  FR++K
Sbjct: 1745 NTILQSHHVNDMEGADSMGISFDVIQQASLEDMITGGQAASAPASYDEAALCSNTFRILK 1804

Query: 1549 QLIQRCLTDAVTSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEF 1608
             ++   + +     N++AD  + H YRWL SP S LHDP LHR LH +M+K+F  L+AEF
Sbjct: 1805 SMVVGWVKEITQYHNIYADNQVMHFYRWLRSPSSLLHDPALHRTLHSMMKKLFLQLIAEF 1864

Query: 1609 RKLGATIIFANFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLF 1668
            ++LG+++I+ANF+++I+ T K  +  A AY + +  ++ ++E+F  + +     W  LL+
Sbjct: 1865 KRLGSSVIYANFNRIILCTKKRRVEDAVAYVEYVTSSIHSKEIFHSLTISFSRCWEFLLW 1924

Query: 1669 MDQYNYGGIPARADE----SLDDDSQVD------------------------------IV 1694
            MD  NYGGI  +        L D  +                                + 
Sbjct: 1925 MDPSNYGGIKGKVSSRIHCGLQDPQEAGGAADEQEDEEEEEKDGEEEEDAEESGVEDLLE 1984

Query: 1695 SSWNIAEYLPK--EIQDHFVLVVSEFMYIPWKHAQK------LAASRASLQEGSSCTPSI 1746
            ++WNI ++LP+    Q +F+++VS ++   + H  K      +  S    + G+S     
Sbjct: 1985 NNWNILQFLPQAASCQSYFLMIVSAYIVAVY-HCMKDELRRSVPGSTPVRRRGASQLSQE 2043

Query: 1747 TVAAAENFESHIV---QYVKGEIS-SYFTGKLLSIVRDAIHHMKKMNNDQHNSPGVMQT- 1801
               AA      I     YV  E++ S+FT             ++K      NS  + +  
Sbjct: 2044 AEGAAGALPGMITFSQDYVANELTQSFFT---------ITQKIQKKVTGSRNSTELSEMF 2094

Query: 1802 ----AANIHKVDAPLEFIKHVCAAFALDQNVQHDVLVMRKNLLKYVRVREFAPEAEFRDP 1857
                 +++   +  LEFIK+VC   +LD N+ + V  + ++LL+ V V EF+ EA+FRDP
Sbjct: 2095 PVLPGSHLLLNNPALEFIKYVCKVLSLDTNITNQVNKLNRDLLRLVDVGEFSEEAQFRDP 2154

Query: 1858 CPSFILPNVICSYCNDCRDLDLCRDMA-----LLAQDWHCAMPQCGQPYDREVMENALLQ 1912
            C S++LP V C  CN CRDLDLC+D +     ++   W C+   C   YD   +E AL+ 
Sbjct: 2155 CRSYVLPEVTCRSCNFCRDLDLCKDSSFSEDGVVLPQWLCS--NCQAAYDSSAIEMALVD 2212

Query: 1913 IVRQRERLYHLQDLVCIRCNQVKAAHLAEQCACAGSFRCKEDASDFRSKMQIFLNIANRQ 1972
            +++++   + LQDLVC++C  VK  H+   C+CAG F        F  +++IF NIA   
Sbjct: 2213 VLQKKLMAFTLQDLVCLKCRGVKETHMPVYCSCAGDFALTIHTQVFMEQIRIFQNIAQHY 2272

Query: 1973 GFQLLQECTSWILE 1986
            G   L E   W+L+
Sbjct: 2273 GMSCLLETLEWLLQ 2286


>gi|1206035|gb|AAA90924.1| DNA polymerase epsilon catalytic subunit [Homo sapiens]
          Length = 2285

 Score = 1434 bits (3712), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 737/1455 (50%), Positives = 993/1455 (68%), Gaps = 83/1455 (5%)

Query: 3    RRRWD--------RQDGRRTKKQKLIR----SAEEELEAKLGYDLFSEGDKRLGWLLTFA 50
            RRR D        R DG  +    L R       ++++ + G++   E  ++ GWL+   
Sbjct: 8    RRRADPGADGEASRDDGATSSVSALKRLERSQWTDKMDLRFGFERLKEPGEKTGWLINMH 67

Query: 51   SSSLEDEDTRKVYSCIDLYFVSQDGSTFKSKYKFRPYFYAATKEKMEMDVEAYLRRRYES 110
             + + DED R + S +D YF+  DGS FK    ++PYFY AT++  E +V ++L ++++ 
Sbjct: 68   PTEILDEDKR-LGSAVDYYFIQDDGSRFKVALPYKPYFYIATRKGCEREVSSFLSKKFQG 126

Query: 111  QIADIEILEKEDLDLKNHLSGLHKSYLKISFDTVQQLMDVKKDLLHVVERNQAKFDAAEA 170
            +IA +E + KEDLDL NHL GL ++Y+++SF TV+ L+ V+K++   V++N+ +  A++A
Sbjct: 127  KIAKVETVPKEDLDLPNHLVGLKRNYIRLSFHTVEDLVKVRKEISPAVKKNREQDHASDA 186

Query: 171  YESILTG------------KREQRPQDFLDCIVDLREYDVPYHIRFAIDNDVRCGQWYDV 218
            Y ++L+             +  ++  D LD IVD+REYDVPYHIR +ID  +    WY+V
Sbjct: 187  YTALLSSVLQRGGVITDEEETSKKIADQLDNIVDMREYDVPYHIRLSIDLKIHVAHWYNV 246

Query: 219  SISSTGPLLE--KRVDLLQRAEVHVCAFDIETTKLPLKFPDADYDIIMMISYMLDGQGYL 276
                    +E  +R DL++R +  V AFDIETTKLPLKFPDA+ D IMMISYM+DGQGYL
Sbjct: 247  RYRGNAFPVEITRRDDLVERPDPVVLAFDIETTKLPLKFPDAETDQIMMISYMIDGQGYL 306

Query: 277  IINRECVGEDIEDLEYTPKPEFEGYFKVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDY 336
            I NRE V EDIED E+TPKPE+EG F V N  +E  L++ WF H+QE KP I VTYNGD+
Sbjct: 307  ITNREIVSEDIEDFEFTPKPEYEGPFCVFNEPDEAHLIQRWFEHVQETKPTIMVTYNGDF 366

Query: 337  FDWPFLETRAAHHGFKMSEELGFQCDKNQGECRAKFACHLDCFAWVKRDSYLPQGSQGLK 396
            FDWPF+E RAA HG  M +E+GFQ D +QGE +A    H+DC  WVKRDSYLP GS  LK
Sbjct: 367  FDWPFVEARAAVHGLSMQQEIGFQKD-SQGEYKAPQCIHMDCLRWVKRDSYLPVGSHNLK 425

Query: 397  AVTKAKLGYDPLEVNPEDMVRFAKEKPQMMASYSVSDAVATYYLYMTYVHPFIFSLATII 456
            A   +KLGYDP+E++PEDM R A E+PQ +A+YSVSDAVATYYLYM YVHPFIF+L TII
Sbjct: 426  AAA-SKLGYDPVELDPEDMCRMATEQPQTLATYSVSDAVATYYLYMKYVHPFIFALCTII 484

Query: 457  PMSPDEVLRKGSGTLCEMLLMVQAYKANVICPNKHQSDPEKFYRN-HLLESETYIGGHVE 515
            PM PDEVLRKGSGTLCE LLMVQA+ AN+I PNK + +  K   + H+L+SETY+GGHVE
Sbjct: 485  PMEPDEVLRKGSGTLCEALLMVQAFHANIIFPNKQEQEFNKLTDDGHVLDSETYVGGHVE 544

Query: 516  CLESGVFRSDLPTSFKLDPSAYEQLLNNLDRDLQYAIKVEGKMDLESVSNYDEVKNAIME 575
             LESGVFRSD+P  F+++P+A++ LL  +++ L++A++ E K+ +E V+N++EV + I  
Sbjct: 545  ALESGVFRSDIPCRFRMNPAAFDFLLQRVEKTLRHALEEEEKVPVEQVTNFEEVCDEIKS 604

Query: 576  KLLRLQEEPIREECPLIYHLDVAAMYPNIILTNRLQPPSIVTDEVCTACDFNRPGKTCLR 635
            KL  L++ P R ECPLIYHLDV AMYPNIILTNRLQP ++V +  C ACDFN+PG  C R
Sbjct: 605  KLASLKDVPSRIECPLIYHLDVGAMYPNIILTNRLQPSAMVDEATCAACDFNKPGANCQR 664

Query: 636  KLEWVWRGEIFMGKRSDYYHLKKQIESE-----FVDGTNGHLSKSFLDLPKMEQQSRLKD 690
            K+ W WRGE     RS+Y+ ++ Q+ESE     F +G     +++F +L + EQ    K 
Sbjct: 665  KMAWQWRGEFMPASRSEYHRIQHQLESEKFPPLFPEGP----ARAFHELSREEQAKYEKR 720

Query: 691  RLKKYCQKAYKRVLDKPVTELREAGICMRENSFYVDTVRSFRDRRYEYKGLNKVWKGKLS 750
            RL  YC+KAYK++    V E R   IC RENSFYVDTVR+FRDRRYE+KGL+KVWK KLS
Sbjct: 721  RLADYCRKAYKKIHITKVEE-RLTTICQRENSFYVDTVRAFRDRRYEFKGLHKVWKKKLS 779

Query: 751  EAKASGNSIKIQEAQDMVVLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGA 810
             A   G++ +++  ++M VLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAG+V +TGA
Sbjct: 780  AAVEVGDAAEVKRCKNMEVLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGIVCFTGA 839

Query: 811  KIIQNARLLIEKIGKPLELDTDGIWCVLPGSFPENFTFKTKDLKK-KLTISYPCVMLNVD 869
             II  AR LIE+IG+PLELDTDGIWCVLP SFPENF FKT ++KK K+TISYP  MLN+ 
Sbjct: 840  NIITQARELIEQIGRPLELDTDGIWCVLPNSFPENFVFKTTNVKKPKVTISYPGAMLNIM 899

Query: 870  VARNNTNDQYQTLVDPVSKTYETHSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFN 929
            V    TNDQYQ L +P S TY T SE SI FEVDGPY AMILPASKEEG  +KKRYAVFN
Sbjct: 900  VKEGFTNDQYQELAEPSSLTYVTRSENSIFFEVDGPYLAMILPASKEEGKKLKKRYAVFN 959

Query: 930  DDGTLAELKGFEIKRRGELKLIKVFQAELFDKFLHGSTIEECYSAVAAVANRWLDLLDNQ 989
            +DG+LAELKGFE+KRRGEL+LIK+FQ+ +F+ FL GST+EE Y +VA VA+ WLD+L ++
Sbjct: 960  EDGSLAELKGFEVKRRGELQLIKIFQSSVFEAFLKGSTLEEVYGSVAKVADYWLDVLYSK 1019

Query: 990  GKDIADSELIDYISESSTMSKSLADYGEQKSCAVTTARRLSDFLGDTMVKDKGLRCQYIV 1049
              ++ DSEL + ISE+ +MS+ L DYGEQKS +++TA+RL++FLGD MVKD GL C+YI+
Sbjct: 1020 AANMPDSELFELISENRSMSRKLEDYGEQKSTSISTAKRLAEFLGDQMVKDAGLSCRYII 1079

Query: 1050 ACEPQGTPVSERAVPVAIFETDAEIMKFYLRKWCKTSS--DVGIRSIVDWSYYKQRLSSA 1107
            + +P+G+PV+ERA+P+AIF+ +  + K +LRKW K+SS  D  IR+I+DW YY +RL SA
Sbjct: 1080 SRKPEGSPVTERAIPLAIFQAEPTVRKHFLRKWLKSSSLQDFDIRAILDWDYYIERLGSA 1139

Query: 1108 IQKIITIPAAMQKVSNPVPRVVHPDWLYKKVREKEDKFRQRKLVDIFSSLKKDDFLNKTC 1167
            IQKIITIPAA+Q+V NPVPRV HPDWL+KK+ EK D ++Q+K+ ++F+   +        
Sbjct: 1140 IQKIITIPAALQQVKNPVPRVKHPDWLHKKLLEKNDVYKQKKISELFTLEGRRQV--TMA 1197

Query: 1168 NAETNLMDENVEDLEDFPKKRRNSVNGPRPIVRCFEVNNEQKTVKTTDQVDSLRQQLEPS 1227
             A  +    +  D+EDF       V  P P      V  ++K V    Q +S  Q L P+
Sbjct: 1198 EASEDSPRPSAPDMEDF-----GLVKLPHPAA---PVTVKRKRVLWESQEES--QDLTPT 1247

Query: 1228 ----EVSDQQPSSQNAIDTENIDRIVDYKGWLELKKRKW----KDNLDRRKKQKLGSLRA 1279
                E+  Q P    A+ T   + +V    WL   K+KW    +  L RRK+Q+L S   
Sbjct: 1248 VPWQEILGQPP----ALGTSQEEWLV----WLRFHKKKWQLQARQRLARRKRQRLESADG 1299

Query: 1280 SHQANGVSESLGDMINHKEAQRRTGVGSYFRRQETAMTRCHWQIIQLVPSSQSGVFLAWV 1339
              +   + +              TG+GS+ RR   ++    WQI+Q+  +SQ+G+F  W 
Sbjct: 1300 VLRPGAIRDGPA-----------TGLGSFLRRTARSILDLPWQIVQISETSQAGLFRLWA 1348

Query: 1340 VVEGIMVRIPITVPRLFYLNSKDPIVEKFPG-RRVNKTLPHGRRSFNLIEVMIDEDQFRK 1398
            +V   +  I +++PR+FY+N +    E+    R+VN+ LP     +NL E  + ED +++
Sbjct: 1349 LVGSDLHCIRLSIPRVFYVNQRVAKAEEGASYRKVNRVLPRSNMVYNLYEYSVPEDMYQE 1408

Query: 1399 ESKKLAALLADPEVE 1413
               ++ A L+ P++E
Sbjct: 1409 HINEINAELSAPDIE 1423



 Score =  317 bits (813), Expect = 3e-83,   Method: Compositional matrix adjust.
 Identities = 192/609 (31%), Positives = 306/609 (50%), Gaps = 70/609 (11%)

Query: 1442 LARYAHILWISDDGVPDLGGTSEEDECFA---DEVHQPVLTYPGAYRKVSVELKIHHLSV 1498
            L R+ H+LW+S    PDLGG   +D C     D+     +   G Y  V VEL + +L+V
Sbjct: 1676 LQRHNHLLWLSPTARPDLGGKEADDNCLVMEFDDQATVEINSSGCYSTVCVELDLQNLAV 1735

Query: 1499 NALLKSNQVNEMEGGGLFGFDQD----------MNSGPYNNELCGFDETTSSAPAFRVVK 1548
            N +L+S+ VN+MEG    G   D          +  G   +    +DET   +  FR++K
Sbjct: 1736 NTILQSHHVNDMEGADSMGISFDVIQQASLEDMITGGQAASAPASYDETALCSNTFRILK 1795

Query: 1549 QLIQRCLTDAVTSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEF 1608
             ++   + +     N++AD  + H YRWL SP S LHDP LHR LH +M+K+F  L+AEF
Sbjct: 1796 SMVVGWVKEITQYHNIYADNQVMHFYRWLRSPSSLLHDPALHRTLHNMMKKLFLQLIAEF 1855

Query: 1609 RKLGATIIFANFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLF 1668
            ++LG+++I+ANF+++I+ T K  +  A AY + +  ++ ++E F  + +     W  LL+
Sbjct: 1856 KRLGSSVIYANFNRIILCTKKRRVEDAIAYVEYITSSIHSKETFHSLTISFSRCWEFLLW 1915

Query: 1669 MDQYNYGGIPARADESLD---DDSQV-------------------------------DIV 1694
            MD  NYGGI  +    +     DSQ                                D++
Sbjct: 1916 MDPSNYGGIKGKVSSRIHCGLQDSQKAGGAEDEQENEDDEEERDGEEEEEAEESNVEDLL 1975

Query: 1695 -SSWNIAEYLPK--EIQDHFVLVVSEFMYIPWKHAQKLAASRASLQEGSSCTPSITVAAA 1751
             ++WNI ++LP+    Q++F+++VS ++   + H  K    R++   GS+       +  
Sbjct: 1976 ENNWNILQFLPQAASCQNYFLMIVSAYIVAVY-HCMKDGLRRSA--PGSTPVRRRGASQL 2032

Query: 1752 ENFESHIVQYVKGEIS---SYFTGKLLSIVRDAIHHMKKMNNDQHNSPGVMQT-----AA 1803
                   V  + G I+    Y   +L          ++K      NS  + +       +
Sbjct: 2033 SQEAEGAVGALPGMITFSQDYVANELTQSFFTITQKIQKKVTGSRNSTELSEMFPVLPGS 2092

Query: 1804 NIHKVDAPLEFIKHVCAAFALDQNVQHDVLVMRKNLLKYVRVREFAPEAEFRDPCPSFIL 1863
            ++   +  LEFIK+VC   +LD N+ + V  + ++LL+ V V EF+ EA+FRDPC S++L
Sbjct: 2093 HLLLNNPALEFIKYVCKVLSLDTNITNQVNKLNRDLLRLVDVGEFSEEAQFRDPCRSYVL 2152

Query: 1864 PNVICSYCNDCRDLDLCRDM------ALLAQDWHCAMPQCGQPYDREVMENALLQIVRQR 1917
            P VIC  CN CRDLDLC+D       A+L Q W C+   C  PYD   +E  L+++++++
Sbjct: 2153 PEVICRSCNFCRDLDLCKDSSFSEDGAVLPQ-WLCS--NCQAPYDSSAIEMTLVEVLQKK 2209

Query: 1918 ERLYHLQDLVCIRCNQVKAAHLAEQCACAGSFRCKEDASDFRSKMQIFLNIANRQGFQLL 1977
               + LQDLVC++C  VK   +   C+CAG F        F  ++ IF NIA   G   L
Sbjct: 2210 LMAFTLQDLVCLKCRGVKETSMPVYCSCAGDFALTIHTQVFMEQIGIFRNIAQHYGMSYL 2269

Query: 1978 QECTSWILE 1986
             E   W+L+
Sbjct: 2270 LETLEWLLQ 2278


>gi|148688080|gb|EDL20027.1| polymerase (DNA directed), epsilon [Mus musculus]
          Length = 1947

 Score = 1433 bits (3709), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 726/1419 (51%), Positives = 972/1419 (68%), Gaps = 67/1419 (4%)

Query: 25   EELEAKLGYDLFSEGDKRLGWLLTFASSSLEDEDTRKVYSCIDLYFVSQDGSTFKSKYKF 84
            ++++ + G++   E  +R GWL+    + + DED R V S +D YF+  DGS FK    +
Sbjct: 42   DKMDLRFGFERLKEPGERTGWLINMHPTEILDEDKRLV-SAVDYYFIQDDGSRFKVALPY 100

Query: 85   RPYFYAATKEKMEMDVEAYLRRRYESQIADIEILEKEDLDLKNHLSGLHKSYLKISFDTV 144
             PYFY A ++  + +V ++L ++++ +IA +E + KEDLDL NHL GL +SY+K+SF TV
Sbjct: 101  MPYFYIAARKGCDREVSSFLSKKFQGKIAKLENVPKEDLDLPNHLVGLKRSYIKLSFHTV 160

Query: 145  QQLMDVKKDLLHVVERNQAKFDAAEAYESILTG------------KREQRPQDFLDCIVD 192
            + L+ V+K++   V++N+ +  A++ Y ++L+             +  ++  D LD IVD
Sbjct: 161  EDLVKVRKEISPAVKKNREQDHASDEYTTMLSSILQGGSVITDEDETSKKIADQLDNIVD 220

Query: 193  LREYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLLE--KRVDLLQRAEVHVCAFDIETTK 250
            +REYDVPYHIR +ID  +    WY+V        +E  +R DL++R +  V AFDIETTK
Sbjct: 221  MREYDVPYHIRLSIDLRIHVAHWYNVRFRGNAFPVEITRRDDLVERPDPVVLAFDIETTK 280

Query: 251  LPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNVNNE 310
            LPLKFPDA+ D IMMISYM+DGQGYLI NRE V EDIED E+TPKPE+EG F V N  +E
Sbjct: 281  LPLKFPDAETDQIMMISYMIDGQGYLITNREIVSEDIEDFEFTPKPEYEGPFCVFNEPDE 340

Query: 311  IELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDKNQGECRA 370
            + L++ WF H+QE KP I VTYNGD+FDWPF+E RAA HG  M +E+GFQ D +QGE +A
Sbjct: 341  VHLIQRWFEHIQETKPTIMVTYNGDFFDWPFVEARAAIHGLSMYQEIGFQKD-SQGEYKA 399

Query: 371  KFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQMMASYS 430
                H+DC  WVKRDSYLP GS  LKA  KAKLGYDP+E++PEDM R A E+PQ +A+YS
Sbjct: 400  PQCIHMDCLRWVKRDSYLPVGSHNLKAAAKAKLGYDPVELDPEDMCRMATEQPQTLATYS 459

Query: 431  VSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVICPNK 490
            VSDAVATYYLYM YVHPFIF+L TIIPM PDEVLRKGSGTLCE LLMVQA+ AN+I PNK
Sbjct: 460  VSDAVATYYLYMKYVHPFIFALCTIIPMEPDEVLRKGSGTLCEALLMVQAFHANIIFPNK 519

Query: 491  HQSDPEKFYRN-HLLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQLLNNLDRDLQ 549
             + +  K   + H+L++ETY+GGHVE LESGVFRSD+P  F+++P+A++ LL  +++ ++
Sbjct: 520  QEQEFNKLTDDGHVLDAETYVGGHVEALESGVFRSDIPCRFRMNPAAFDFLLQRVEKTMR 579

Query: 550  YAIKVEGKMDLESVSNYDEVKNAIMEKLLRLQEEPIREECPLIYHLDVAAMYPNIILTNR 609
            +AI+ E K+ +E  +N+ EV   I  KL  L++ P R ECPLIYHLDV AMYPNIILTNR
Sbjct: 580  HAIEEEEKVPVEQATNFQEVCEQIKTKLTSLKDVPNRIECPLIYHLDVGAMYPNIILTNR 639

Query: 610  LQPPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYYHLKKQIESE-----F 664
            LQP +IV +  C ACDFN+PG +C RK+ W WRGE     RS+Y+ ++ Q+ESE     F
Sbjct: 640  LQPSAIVDEATCAACDFNKPGASCQRKMAWQWRGEFMPASRSEYHRIQHQLESEKFPPLF 699

Query: 665  VDGTNGHLSKSFLDLPKMEQQSRLKDRLKKYCQKAYKRVLDKPVTELREAGICMRENSFY 724
             +G     +++F +L + EQ    K RL  YC+KAYK++    V E R   IC RENSFY
Sbjct: 700  PEGP----ARAFHELSREEQAKYEKRRLADYCRKAYKKIHVTKVEE-RLTTICQRENSFY 754

Query: 725  VDTVRSFRDRRYEYKGLNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHKCILNS 784
            VDTVR+FRDRRYE+KGL+KVWK KLS A   G++ +++  ++M +LYDSLQLAHKCILNS
Sbjct: 755  VDTVRAFRDRRYEFKGLHKVWKKKLSAAVEVGDASEVKRCKNMEILYDSLQLAHKCILNS 814

Query: 785  FYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLPGSFPE 844
            FYGYVMRKGARWYSMEMAG+V +TGA II  AR LIE+IG+PLELDTDGIWCVLP SFPE
Sbjct: 815  FYGYVMRKGARWYSMEMAGIVCFTGANIITQARELIEQIGRPLELDTDGIWCVLPNSFPE 874

Query: 845  NFTFKTKDLKK-KLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEFEVD 903
            NF  KT + KK KLTISYP  MLN+ V    TN QYQ L +P S TY THSE SI FEVD
Sbjct: 875  NFVIKTTNAKKPKLTISYPGAMLNIMVKEGFTNHQYQELTEPSSLTYVTHSENSIFFEVD 934

Query: 904  GPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFL 963
            GPY AMILPASKEEG  +KKRYAVFN+DG+LAELKGFE+KRRGEL+LIK+FQ+ +F+ FL
Sbjct: 935  GPYLAMILPASKEEGKKLKKRYAVFNEDGSLAELKGFEVKRRGELQLIKIFQSSVFEAFL 994

Query: 964  HGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLADYGEQKSCAV 1023
             GST+EE Y +VA VA+ WLD+L ++  ++ DSEL + ISE+ +MS+ L DYGEQKS ++
Sbjct: 995  KGSTLEEVYGSVAKVADYWLDVLYSKAANMPDSELFELISENRSMSRKLEDYGEQKSTSI 1054

Query: 1024 TTARRLSDFLGDTMVKDKGLRCQYIVACEPQGTPVSERAVPVAIFETDAEIMKFYLRKWC 1083
            +TA+RL++FLGD MVKD GL C+YI++ +P+G+PV+ERA+P+AIF+ +  + K +LRKW 
Sbjct: 1055 STAKRLAEFLGDQMVKDAGLSCRYIISRKPEGSPVTERAIPLAIFQAEPTVRKHFLRKWL 1114

Query: 1084 KTSS--DVGIRSIVDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLYKKVREK 1141
            K+SS  D  IR+I+DW YY +RL SAIQKIITIPAA+Q+V NPVPRV HPDWL+KK+ EK
Sbjct: 1115 KSSSLQDFDIRTILDWDYYIERLGSAIQKIITIPAALQQVKNPVPRVKHPDWLHKKLLEK 1174

Query: 1142 EDKFRQRKLVDIFSSLKKDDFLNKTCNAETNLMDENVEDLED--FPKKRRNSVNGPRPIV 1199
             D ++Q+K+ ++F    K   +     A  N +     D+ED    K   ++V       
Sbjct: 1175 NDIYKQKKISELFVLEGKRQIV--MAQASENSLSLCTPDMEDIGLTKPHHSTVPVATKRK 1232

Query: 1200 RCFEVNNEQKTVKTTDQVDSLRQQLEPSEVSDQQPSSQNAIDTENIDRIVDYKGWLELKK 1259
            R +E   E + +  T         +   EV  Q PS    + T   + +V    WL+  K
Sbjct: 1233 RVWETQKESQDIALT---------VPWQEVLGQPPS----LGTTQEEWLV----WLQFHK 1275

Query: 1260 RKW----KDNLDRRKKQKLGSLRASHQANGVSESLGDMINHKEAQRRTGVGSYFRRQETA 1315
            +KW    +  L  RKKQ+L S     +   + E              TG+GS+ RR   +
Sbjct: 1276 KKWQLQAQQRLALRKKQRLESAEDMPRLGPIREGPS-----------TGLGSFLRRTARS 1324

Query: 1316 MTRCHWQIIQLVPSSQSGVFLAWVVVEGIMVRIPITVPRLFYLNSKDPIVEKFPG-RRVN 1374
            +    WQIIQ+  + Q+G+F  W ++   +  I +++PR+FY+N +    E  P  R+VN
Sbjct: 1325 IMDLPWQIIQISETRQAGLFRLWAIIGNDLHCIKLSIPRVFYVNQRVAKAEDGPAYRKVN 1384

Query: 1375 KTLPHGRRSFNLIEVMIDEDQFRKESKKLAALLADPEVE 1413
            + LP     +NL E  + ED +++   ++   L+ P++E
Sbjct: 1385 RALPRSNIVYNLYEYSVPEDMYQEHINEINTELSVPDIE 1423



 Score =  154 bits (389), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 82/222 (36%), Positives = 128/222 (57%), Gaps = 13/222 (5%)

Query: 1442 LARYAHILWISDDGVPDLGGTSEEDECFA---DEVHQPVLTYPGAYRKVSVELKIHHLSV 1498
            L  + H+LW+S    PDLGG   +D       D+     +   G Y  V VEL I +L+V
Sbjct: 1676 LQHHNHLLWLSPTSRPDLGGKEADDNRLVMEFDDRATVEINSSGCYSTVCVELDIQNLAV 1735

Query: 1499 NALLKSNQVNEMEGGGLFG--FD-------QDMNSG-PYNNELCGFDETTSSAPAFRVVK 1548
            N +L+S+ VN+MEG G  G  FD       +DM +G    + L  +DET   +  FR++K
Sbjct: 1736 NTILQSHHVNDMEGAGSMGISFDVIQQASLEDMVTGNQAASALANYDETALCSSTFRILK 1795

Query: 1549 QLIQRCLTDAVTSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEF 1608
             ++   + +     N++AD  + H YRWL SP S LHDP LHR LH +M+K+F  L+AEF
Sbjct: 1796 SMVVGWVKEITQYHNIYADNQVMHFYRWLQSPCSLLHDPALHRTLHNMMKKLFLQLIAEF 1855

Query: 1609 RKLGATIIFANFSKVIIDTGKFDLSAAKAYCDSLLKALQTRE 1650
            ++LG+++++ANF+++I+ T K  +  A AY + +  +   R+
Sbjct: 1856 KRLGSSVVYANFNRIILCTKKRRIEDALAYVEYITNSKTPRQ 1897


>gi|327284267|ref|XP_003226860.1| PREDICTED: DNA polymerase epsilon catalytic subunit A-like [Anolis
            carolinensis]
          Length = 2456

 Score = 1433 bits (3709), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 718/1413 (50%), Positives = 977/1413 (69%), Gaps = 50/1413 (3%)

Query: 25   EELEAKLGYDLFSEGDKRLGWLLTFASSSLEDEDTRKVYSCIDLYFVSQDGSTFKSKYKF 84
            + ++A+ G++   E  +R GWL+    + + DED R + S +D YF+ +DGS FK    +
Sbjct: 212  DTIDARFGFERIKEPTERTGWLINMHPTEILDED-RHLVSAVDYYFIQEDGSRFKVALPY 270

Query: 85   RPYFYAATKEKMEMDVEAYLRRRYESQIADIEILEKEDLDLKNHLSGLHKSYLKISFDTV 144
            +PYFY A ++  + +V ++L ++++ +IA +E + KEDLDL NHL GL ++YLK+SF++V
Sbjct: 271  KPYFYVAAQKGCDREVSSFLSKKFQGKIAKLETVPKEDLDLPNHLVGLKRNYLKLSFNSV 330

Query: 145  QQLMDVKKDLLHVVERNQAKFDAAEAYESILTG--------KREQRPQ----DFLDCIVD 192
              L+ V+K++   V +NQ +  + +AY ++L           +++ P     + +D IVD
Sbjct: 331  DDLVKVRKEISPAVRKNQERDQSVDAYTTMLASALAGGSLSSKDKEPSKKMSNQMDNIVD 390

Query: 193  LREYDVPYHIRFAIDNDVRCGQWYDVSI--SSTGPLLEKRVDLLQRAEVHVCAFDIETTK 250
            +REYDVPYHIR +ID  +    WY+V    S+  P + +R DL++R +  V AFDIETTK
Sbjct: 391  MREYDVPYHIRLSIDQKIHVAHWYNVRYRGSTFPPEITRRDDLVERPDPVVLAFDIETTK 450

Query: 251  LPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNVNNE 310
            LPLKFPDA+ D IMMISYM+DGQGYLI NRE V EDIED E+TPKPE+EG F V N  +E
Sbjct: 451  LPLKFPDAETDQIMMISYMIDGQGYLITNREIVSEDIEDFEFTPKPEYEGPFCVFNEPDE 510

Query: 311  IELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDKNQGECRA 370
              L++ WF H+Q+ KP I VTYNGD+FDWPF+ETRAA HG  M +E+GFQ D NQGE ++
Sbjct: 511  AHLIQRWFEHVQDTKPTIMVTYNGDFFDWPFVETRAAAHGMSMQKEIGFQKD-NQGEYKS 569

Query: 371  KFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQMMASYS 430
                H+DC  WVKRDSYLP GS  LKA  KAKLGYDP+E++PE+M R A E+PQ +A+YS
Sbjct: 570  SQCIHMDCLRWVKRDSYLPVGSHNLKAAAKAKLGYDPVELDPEEMCRMATEEPQTLATYS 629

Query: 431  VSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVICPNK 490
            VSDAVATYY+YM YVHPFIF+L TIIPM PDEVLRKGSGTLCE LLMVQAY AN++ PNK
Sbjct: 630  VSDAVATYYMYMKYVHPFIFALCTIIPMEPDEVLRKGSGTLCEALLMVQAYHANIVFPNK 689

Query: 491  HQSDPEKFYRN-HLLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQLLNNLDRDLQ 549
             + +  K   + H+L+SETY+GGHVE LESGVFRSD+P  FK++P+A++ LL  +++ L+
Sbjct: 690  QEQEFNKLTEDGHVLDSETYVGGHVEALESGVFRSDIPCRFKMNPAAFDFLLERVEKTLR 749

Query: 550  YAIKVEGKMDLESVSNYDEVKNAIMEKLLRLQEEPIREECPLIYHLDVAAMYPNIILTNR 609
            +AI+VE  + L+ V+N+ EV + I  KL  L++ P R ECPLIYHLDV AMYPNIILTNR
Sbjct: 750  HAIEVEEGIPLDQVTNFQEVCDEIKVKLRSLKDVPNRIECPLIYHLDVGAMYPNIILTNR 809

Query: 610  LQPPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYYHLKKQIESE-----F 664
            LQP ++V +  C ACDFN+PG  C R++ W WRGE     RS+Y+ +++Q+ESE     F
Sbjct: 810  LQPSAMVDEASCAACDFNKPGANCQRRMTWQWRGEFMPASRSEYHRIQQQLESEKFPSLF 869

Query: 665  VDGTNGHLSKSFLDLPKMEQQSRLKDRLKKYCQKAYKRVLDKPVTELREAGICMRENSFY 724
             DG      ++F +L + EQ    K RL  YC+KAYK++    V E R   IC RENSFY
Sbjct: 870  PDGP----PRAFHELTREEQAKYEKKRLADYCRKAYKKIHVTKVEE-RVTTICQRENSFY 924

Query: 725  VDTVRSFRDRRYEYKGLNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHKCILNS 784
            VDTVR+FRDRRYE+KGL+KVWK KL+ A  +G++ +++  ++M +LYDSLQLAHKCILNS
Sbjct: 925  VDTVRAFRDRRYEFKGLHKVWKKKLASALEAGDASEVKRCKNMEILYDSLQLAHKCILNS 984

Query: 785  FYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLPGSFPE 844
            FYGYVMRKGARWYSMEMAG+V +TGA II  AR LIE+IG+PLELDTDGIWCVLP SFPE
Sbjct: 985  FYGYVMRKGARWYSMEMAGIVCFTGANIITQARELIEQIGRPLELDTDGIWCVLPNSFPE 1044

Query: 845  NFTFKTKDLKK-KLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEFEVD 903
            NF  K+   KK K+TISYP  MLN+ V    TNDQYQ LVDP S  Y   SE SI FEVD
Sbjct: 1045 NFVIKSTHTKKPKVTISYPGAMLNIMVKEGFTNDQYQELVDPASLQYVCRSENSIFFEVD 1104

Query: 904  GPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFL 963
            GPY AMILPASKEEG  +KKRYAVFN+DG+LAELKGFE+KRRGEL+L+K+FQ+ +F+ FL
Sbjct: 1105 GPYLAMILPASKEEGKKLKKRYAVFNEDGSLAELKGFEVKRRGELQLVKIFQSSVFEAFL 1164

Query: 964  HGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLADYGEQKSCAV 1023
             G+T+EE Y+AVA VA+ WLD+L ++  ++ DSEL + ISE+ +MS+ L DYGEQKS ++
Sbjct: 1165 KGTTLEEVYAAVAKVADYWLDVLYSKAANMPDSELFELISENRSMSRKLEDYGEQKSTSI 1224

Query: 1024 TTARRLSDFLGDTMVKDKGLRCQYIVACEPQGTPVSERAVPVAIFETDAEIMKFYLRKWC 1083
            +TA+RL++FLGD MVKD GL C++I++ +P+G PV+ERA+P+AIF+ +  + + YLRKW 
Sbjct: 1225 STAKRLAEFLGDQMVKDAGLSCRFIISKKPEGAPVTERAIPLAIFQAELSVRRHYLRKWL 1284

Query: 1084 KTSS--DVGIRSIVDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLYKKVREK 1141
            K+ S  D+ IR+I+DW YY +RL + IQKIITIPAA+Q+V NPVPRV HPDWL+KK+ EK
Sbjct: 1285 KSPSLQDLDIRTILDWDYYIERLGNTIQKIITIPAALQQVKNPVPRVHHPDWLHKKLLEK 1344

Query: 1142 EDKFRQRKLVDIFSSLKKDDFLNKTCNAETNLMDENVEDLEDFPKKRRNSVNGPRPIVRC 1201
             D ++Q+K+ ++F S  K          E +     V D+EDF           RP+ + 
Sbjct: 1345 NDIYKQKKISELFVSSGKRQVPANLPREEEDTPCTQVTDIEDF--------GVSRPLQKG 1396

Query: 1202 FEVNNEQKTVKTTDQVDSLRQQLEPSEVSDQQPSSQNAIDTENIDRIVDYKGWLELKKRK 1261
              V++++K + T ++     Q LE +    +       I T   +R+     WL   KRK
Sbjct: 1397 VPVSSKRKRIPTAEESQPQSQNLELTLSWREILGPPPPIGTTKEERV----AWLCFHKRK 1452

Query: 1262 WKDNLDRRKKQKLGSLRASHQANGVSESLGDMINHKEAQRRTGVGSYFRRQETAMTRCHW 1321
            W    + + +Q+    +    A+G     G +I    A    G+ +Y  R   ++    W
Sbjct: 1453 W----ELQARQRQERRKRRRLADGEVARSGGLIR---AGATKGLSNYLLRTARSILDLPW 1505

Query: 1322 QIIQLVPSSQSGVFLAWVVVEGIMVRIPITVPRLFYLNSKDPIVEKFPG-RRVNKTLPHG 1380
            QI+Q+V +SQ G+F  W V+   +  + + VPR+FY+N + P  E+ P  R+VN+ LP  
Sbjct: 1506 QIVQIVETSQPGLFRLWAVIGSDLHCLKLHVPRIFYVNQRVPKPEEGPVYRKVNRILPRS 1565

Query: 1381 RRSFNLIEVMIDEDQFRKESKKLAALLADPEVE 1413
               +NL E  + E+ +++   ++ A L+ P++E
Sbjct: 1566 NLVYNLYEYSVPEEMYQEHLNEINASLSAPDIE 1598



 Score =  316 bits (810), Expect = 8e-83,   Method: Compositional matrix adjust.
 Identities = 185/604 (30%), Positives = 315/604 (52%), Gaps = 66/604 (10%)

Query: 1442 LARYAHILWISDDGVPDLGGTSEEDECFADEVHQPV---LTYPGAYRKVSVELKIHHLSV 1498
            L R+ H+LW+S    PDLGG   +D     E+ + +   + +PG Y  V VEL I  L+V
Sbjct: 1851 LGRHNHLLWLSPAVRPDLGGKEADDSRLVMELDEKISVEINHPGCYSTVCVELDIQSLAV 1910

Query: 1499 NALLKSNQVNEMEGGG--LFGFD-------QDMNSGPYNNEL-CGFDETTSSAPAFRVVK 1548
            N +L+S+ VN+MEG       FD       +DM +G     +   +DE    +  FR++K
Sbjct: 1911 NTILQSHHVNDMEGAASTCVSFDVIPQASLEDMVTGNQAASVPASYDEAALCSNTFRILK 1970

Query: 1549 QLIQRCLTDAVTSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEF 1608
             ++   + +     NV+AD  + H YRWL SP S L+DP LHR+LH +M+K+F  L+AEF
Sbjct: 1971 SMVVSWVKEITQYHNVYADNQVIHFYRWLRSPTSLLYDPALHRMLHNMMKKLFLQLVAEF 2030

Query: 1609 RKLGATIIFANFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLF 1668
            ++LG+ +++ANF+++++ T K  +  A AY + +  ++ ++E+F  + +     W  LL+
Sbjct: 2031 KRLGSLVVYANFNRIVLCTKKRHIEDALAYVEYITNSIHSKEIFHSLTISFSRCWEFLLW 2090

Query: 1669 MDQYNYGGI----PARADESLDDDSQVD---------------------------IVSSW 1697
            MD  NYGGI    P+R       +S+                             + ++W
Sbjct: 2091 MDPANYGGIKGKVPSRVHCGEGTNSKPTADADGSEDEEEEEDKEEGDGAEGVEDLLENTW 2150

Query: 1698 NIAEYLPK--EIQDHFVLVVSEFMYIPW----KHAQKLAASRASLQEGSSCTPSITVAAA 1751
            NI +YLP     Q +F+++VS ++   +    +  Q+ +     ++  +S   S   A  
Sbjct: 2151 NIVQYLPSAASCQTYFLMIVSAYIVAVYHSLKEERQRNSPGSTPVKRRASSQVSQEPAEE 2210

Query: 1752 ENFESHIVQYVKGEISSYFTGKLLSIVRDAIHHMKKMNNDQHNS-PGVM---QTAANIHK 1807
                   + + +  +++  T    +I +      KK++  +  + P  M      + +  
Sbjct: 2211 RGAMPGTIAFSQDYVANELTQSFFTITQKI---QKKVSGSRRTTKPSAMFPSLPGSYLVF 2267

Query: 1808 VDAPLEFIKHVCAAFALDQNVQHDVLVMRKNLLKYVRVREFAPEAEFRDPCPSFILPNVI 1867
             +  LEF+K VC   +LD NV + V  ++++LL+ V VREF+ EA+F+DPC S++LP +I
Sbjct: 2268 NNPALEFVKSVCEVLSLDANVTNQVSKLKRDLLRLVDVREFSEEAQFQDPCCSYVLPEMI 2327

Query: 1868 CSYCNDCRDLDLCRDMALLAQD------WHCAMPQCGQPYDREVMENALLQIVRQRERLY 1921
            C  CN CRDLDLC+D  + +QD      W C  P C  PYD + +E AL++ ++++   +
Sbjct: 2328 CKSCNFCRDLDLCKD-PVFSQDGSVLPGWAC--PSCQAPYDSDAIELALVEALQKKLMAF 2384

Query: 1922 HLQDLVCIRCNQVKAAHLAEQCACAGSFRCKEDASDFRSKMQIFLNIANRQGFQLLQECT 1981
             LQDLVC++C  +K +H+   C+CAG F        F  ++++F +IA       L +  
Sbjct: 2385 SLQDLVCLKCKGIKDSHMRLHCSCAGDFDLLLPTKTFLDQLKVFQSIAQHYNMAYLLDTV 2444

Query: 1982 SWIL 1985
            +W+L
Sbjct: 2445 TWLL 2448


>gi|432095063|gb|ELK26452.1| DNA polymerase epsilon catalytic subunit A [Myotis davidii]
          Length = 2245

 Score = 1432 bits (3706), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 725/1415 (51%), Positives = 978/1415 (69%), Gaps = 63/1415 (4%)

Query: 27   LEAKLGYDLFSEGDKRLGWLLTFASSSLEDEDTRKVYSCIDLYFVSQDGSTFKSKYKFRP 86
            ++++ G++   E  ++ GWL+    + + DED R V S +D YF+  DGS FK    ++P
Sbjct: 1    MDSRFGFERLKEPGEKTGWLINMHPTEVLDEDKRLV-SAVDYYFIQDDGSRFKVALPYKP 59

Query: 87   YFYAATKEKMEMDVEAYLRRRYESQIADIEILEKEDLDLKNHLSGLHKSYLKISFDTVQQ 146
            YFY A ++  E +V ++L ++++ ++A +E + KEDLDL NHL GL ++Y+K+SF TV+ 
Sbjct: 60   YFYIAARKGCEREVSSFLSKKFQGKLAKVETVPKEDLDLPNHLVGLKRNYIKLSFHTVED 119

Query: 147  LMDVKKDLLHVVERNQAKFDAAEAYESILTG------------KREQRPQDFLDCIVDLR 194
            L+ V+K++   V +N+ +   ++ Y ++L+             +  ++  D LD IVD+R
Sbjct: 120  LVRVRKEISPSVRKNREQGHTSDTYTAMLSSVLQGGSVIMDEEETSKKIADQLDNIVDMR 179

Query: 195  EYDVPYHIRFAIDNDVRCGQWYDV-SISSTGPL-LEKRVDLLQRAEVHVCAFDIETTKLP 252
            EYDVPYHIR +ID  +    WY+V    S  P+ + +R DL++R +  V AFDIETTKLP
Sbjct: 180  EYDVPYHIRLSIDLKIHVAHWYNVRHRGSASPVEITRRDDLVERPDPVVLAFDIETTKLP 239

Query: 253  LKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNVNNEIE 312
            LKFPDA+ D IMMISYM+DGQGYLI NRE V EDIED E+TPKPE+EG F V N  +E+ 
Sbjct: 240  LKFPDAETDQIMMISYMIDGQGYLITNREIVAEDIEDFEFTPKPEYEGPFCVFNEPDEVH 299

Query: 313  LLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDKNQGECRAKF 372
            L++ WF H+QE KP I VTYNGD+FDWPF+E RAA HG  M +E+GFQ D +QGE +A  
Sbjct: 300  LIQRWFEHVQETKPTIMVTYNGDFFDWPFVEARAAVHGLSMYQEIGFQKD-SQGEYKAPQ 358

Query: 373  ACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQMMASYSVS 432
              H+DC  WVKRDSYLP GS  LKA  KAKLGYDP+E++PEDM R A E+PQ +A+YSVS
Sbjct: 359  CIHMDCLRWVKRDSYLPVGSHNLKAAAKAKLGYDPVELDPEDMCRMATEQPQTLATYSVS 418

Query: 433  DAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVICPNKHQ 492
            DAVATYYLYM YVHPFIF+L TIIPM PDEVLRKGSGTLCE LLMVQA+ AN++ PNK +
Sbjct: 419  DAVATYYLYMKYVHPFIFALCTIIPMEPDEVLRKGSGTLCEALLMVQAFHANIVFPNKQE 478

Query: 493  SDPEKFYRN-HLLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQLLNNLDRDLQYA 551
             +  K   + H+L++ETY+GGHVE LESGVFRSD+P  F+++P+A++ LL  +++ +++A
Sbjct: 479  QEFNKLTEDGHVLDAETYVGGHVEALESGVFRSDIPCRFRMNPAAFDFLLQRVEKTMRHA 538

Query: 552  IKVEGKMDLESVSNYDEVKNAIMEKLLRLQEEPIREECPLIYHLDVAAMYPNIILTNRLQ 611
            I+ E K+ +E V+N+ EV + I  KL  L++ P R ECPLIYHLDV AMYPNIILTNRLQ
Sbjct: 539  IEEEEKVPMEQVTNFQEVCDQIKAKLTSLKDVPNRIECPLIYHLDVGAMYPNIILTNRLQ 598

Query: 612  PPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYYHLKKQIESE-FVDGTNG 670
            P ++V +  C ACDFN+PG  C RK+ W WRGE     RS+Y+ ++ Q+ESE F   T  
Sbjct: 599  PSAMVDEATCAACDFNKPGANCQRKMAWQWRGEFMPASRSEYHRIQHQLESEKFPALTPD 658

Query: 671  HLSKSFLDLPKMEQQSRLKDRLKKYCQKAYKRVLDKPVTELREAGICMRENSFYVDTVRS 730
              +++F +L + EQ    K RL  YC+KAYK++    V E R   IC RENSFYVDTVR+
Sbjct: 659  GPARAFHELSREEQAKYEKRRLADYCRKAYKKIHVTKVEE-RLTTICQRENSFYVDTVRA 717

Query: 731  FRDRRYEYKGLNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHKCILNSFYGYVM 790
            FRDRRYE+KGL+KVWK KLS A  +G++ +++  ++M VLYDSLQLAHKCILNSFYGYVM
Sbjct: 718  FRDRRYEFKGLHKVWKKKLSAAVEAGDAAEVKRCKNMEVLYDSLQLAHKCILNSFYGYVM 777

Query: 791  RKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLPGSFPENFTFKT 850
            RKGARWYSMEMAG+V +TGA II  AR LIE+IG+PLELDTDGIWCVLP SFPENF   T
Sbjct: 778  RKGARWYSMEMAGIVCFTGANIITQARELIEQIGRPLELDTDGIWCVLPNSFPENFVITT 837

Query: 851  KDLKK-KLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEFEVDGPYKAM 909
              +KK K+TISYP  MLN+ V    TNDQYQ L +P S TY T SE SI FEVDGPY AM
Sbjct: 838  TSVKKPKVTISYPGAMLNIMVKEGFTNDQYQELAEPSSLTYVTRSENSIFFEVDGPYLAM 897

Query: 910  ILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFLHGSTIE 969
            ILPASKEEG  +KKRYAVFN+DG+LAELKGFE+KRRGEL+LIK+FQ+ +F+ FL GST+E
Sbjct: 898  ILPASKEEGKKLKKRYAVFNEDGSLAELKGFEVKRRGELQLIKIFQSSVFEAFLRGSTLE 957

Query: 970  ECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLADYGEQKSCAVTTARRL 1029
            E Y +VA VA+ WLD+L ++  ++ DSEL + ISE+ +MS+ L DYGEQKS +++TA+RL
Sbjct: 958  EVYGSVAKVADYWLDVLYSKAANMPDSELFELISENRSMSRKLEDYGEQKSTSISTAKRL 1017

Query: 1030 SDFLGDTMVKDKGLRCQYIVACEPQGTPVSERAVPVAIFETDAEIMKFYLRKWCKTSS-- 1087
            ++FLGD MVKD GL C+YI++ +P+G+PV+ERA+P+AIF+ +  + + +LRKW K+SS  
Sbjct: 1018 AEFLGDQMVKDAGLSCRYIISRKPEGSPVTERAIPLAIFQAEPTVRRHFLRKWLKSSSLQ 1077

Query: 1088 DVGIRSIVDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLYKKVREKEDKFRQ 1147
            D+ IR+I+DW YY +RL SAIQKIITIPAA+Q+V NPVPRV HPDWL+KK+ EK D ++Q
Sbjct: 1078 DLDIRTILDWDYYIERLGSAIQKIITIPAALQQVKNPVPRVKHPDWLHKKLLEKNDVYKQ 1137

Query: 1148 RKLVDIFS-SLKKDDFLNKTCNAETNLMDENVEDLEDFPKKRRNSVNGPRPIVRCFEVNN 1206
            +K+ ++F    K+   + +  +   +L      D+EDF  +        +P      V  
Sbjct: 1138 KKISELFILEGKRQVGVAQPPDGAQSL---GAPDMEDFGLE--------KPPHTAVPVAT 1186

Query: 1207 EQKTVKTTDQVDSLRQQLEPS--EVSDQQPSSQNAIDTENIDRIVDYKGWLELKKRKW-- 1262
            ++K V    Q DS    L  S  E+  Q P    A+ T   + +V    WL   K+KW  
Sbjct: 1187 KRKRVLWESQEDSQDLGLTVSWQEILGQPP----ALGTTQEEWLV----WLRFHKKKWQL 1238

Query: 1263 --KDNLDRRKKQKLGSLRASHQANGVSESLGDMINHKEAQR-RTGVGSYFRRQETAMTRC 1319
              +  L RRKKQ+L             E+ G +       R  TG+G + RR   ++   
Sbjct: 1239 QARQRLARRKKQRL-------------EAAGGLQPGAVRDRPSTGLGGFLRRTARSVLDL 1285

Query: 1320 HWQIIQLVPSSQSGVFLAWVVVEGIMVRIPITVPRLFYLNSKDPIVEKFPG-RRVNKTLP 1378
             WQI+Q+  +SQ+G+F  W V+   +  I + +PR+FY+N + P  E+    R+VN+ LP
Sbjct: 1286 PWQIVQISETSQAGLFRLWAVIGSDLHCIKLNIPRVFYVNQRVPKAEEGTAYRKVNRVLP 1345

Query: 1379 HGRRSFNLIEVMIDEDQFRKESKKLAALLADPEVE 1413
                 +NL E  + ED +++   ++   L+ P++E
Sbjct: 1346 RSNAVYNLYEYSVPEDMYQEHINEINTELSAPDIE 1380



 Score =  325 bits (832), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 194/609 (31%), Positives = 311/609 (51%), Gaps = 67/609 (11%)

Query: 1442 LARYAHILWISDDGVPDLGGTSEEDECFADEVHQPV---LTYPGAYRKVSVELKIHHLSV 1498
            L R+ H+LW+S    PDLGG   +D     E        +   G Y  V VEL I +L+V
Sbjct: 1633 LQRHNHLLWLSPTWRPDLGGKEADDNRLVMEFEDQATVEINSSGCYSTVCVELDIQNLAV 1692

Query: 1499 NALLKSNQVNEMEGGGLFG--FD-------QDMNSG-PYNNELCGFDETTSSAPAFRVVK 1548
            N +L+S+ VN+MEG    G  FD       +DM +G    N    +DET   +  FR++K
Sbjct: 1693 NTILQSHHVNDMEGADSVGISFDVIQQASLEDMITGNQAANAPASYDETALCSSTFRILK 1752

Query: 1549 QLIQRCLTDAVTSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEF 1608
             ++   + +     NV+AD  + H YRWL SP S LHDP LHR LH +M+K+F  L+AEF
Sbjct: 1753 SMVVGWVREITQYRNVYADNQVMHFYRWLRSPSSLLHDPALHRTLHSMMKKLFLQLIAEF 1812

Query: 1609 RKLGATIIFANFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLF 1668
            ++LG+++++ANF+++++ T K  +  A AY D +  ++ ++E+F  + +     W  LL+
Sbjct: 1813 KRLGSSVVYANFNRIVLCTKKRRIEDALAYVDYITTSIHSKEIFHSLTISFSRCWEFLLW 1872

Query: 1669 MDQYNYGGI----PARADESLDD----------------------------------DSQ 1690
            MD  NYGGI    PAR      D                                  D +
Sbjct: 1873 MDPSNYGGIKGNVPARIHYGRQDPQKEGRAEEKPEEEVEDDGGEDDDEGEEDDGQEPDVE 1932

Query: 1691 VDIVSSWNIAEYLPK--EIQDHFVLVVSEFMYIPW----KHAQKLAASRASLQEGSSCTP 1744
              + ++WNI ++LP+    Q +F+++VS ++   +    +  ++ A     ++  ++  P
Sbjct: 1933 DLLENNWNIVQFLPQAASCQGYFLMIVSAYIVAVYHSMKEELRRSAPGSTPVRRRAASQP 1992

Query: 1745 SITVAAAENFESHIVQYVKGEISSYFTGKLLSIVRDAIHHMKKMNNDQHNSPGVMQTAAN 1804
            S    AA      ++ + +  +++  T    +I +     +    N    S        +
Sbjct: 1993 SQEAQAAAGALPGMITFSQDYVANELTQNFFTITQKIQRKVTGSRNSAELSEMFPVLPGS 2052

Query: 1805 IHKVDAP-LEFIKHVCAAFALDQNVQHDVLVMRKNLLKYVRVREFAPEAEFRDPCPSFIL 1863
               ++ P LEF+K+VC   +LD N+ + V  + ++LL+ V V EF+ EA+FRDPC SF+L
Sbjct: 2053 HLVLNNPALEFVKYVCKVLSLDTNITNQVNKLNRDLLRLVDVGEFSEEAQFRDPCRSFVL 2112

Query: 1864 PNVICSYCNDCRDLDLCR------DMALLAQDWHCAMPQCGQPYDREVMENALLQIVRQR 1917
            P VIC  CN CRDLDLC+      D A+L Q W C+   C   YD   +E AL++ ++++
Sbjct: 2113 PEVICHSCNFCRDLDLCKDPSFSQDGAVLPQ-WFCS--NCQAAYDSSAIEMALVEALQKK 2169

Query: 1918 ERLYHLQDLVCIRCNQVKAAHLAEQCACAGSFRCKEDASDFRSKMQIFLNIANRQGFQLL 1977
               + LQDLVC++C  VK  +++  C+CAG F        F  +++IF NIA   G   L
Sbjct: 2170 LMAFTLQDLVCLKCRGVKETNMSVYCSCAGGFTLTIHTKVFMEQIRIFRNIAQHYGMSYL 2229

Query: 1978 QECTSWILE 1986
             E   W+L+
Sbjct: 2230 METLEWLLQ 2238


>gi|195947387|ref|NP_035262.2| DNA polymerase epsilon catalytic subunit A [Mus musculus]
 gi|341940503|sp|Q9WVF7.3|DPOE1_MOUSE RecName: Full=DNA polymerase epsilon catalytic subunit A; AltName:
            Full=DNA polymerase II subunit A
          Length = 2283

 Score = 1430 bits (3702), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 726/1419 (51%), Positives = 972/1419 (68%), Gaps = 67/1419 (4%)

Query: 25   EELEAKLGYDLFSEGDKRLGWLLTFASSSLEDEDTRKVYSCIDLYFVSQDGSTFKSKYKF 84
            ++++ + G++   E  +R GWL+    + + DED R V S +D YF+  DGS FK    +
Sbjct: 42   DKMDLRFGFERLKEPGERTGWLINMHPTEILDEDKRLV-SAVDYYFIQDDGSRFKVALPY 100

Query: 85   RPYFYAATKEKMEMDVEAYLRRRYESQIADIEILEKEDLDLKNHLSGLHKSYLKISFDTV 144
             PYFY A ++  + +V ++L ++++ +IA +E + KEDLDL NHL GL +SY+K+SF TV
Sbjct: 101  MPYFYIAARKGCDREVSSFLSKKFQGKIAKLENVPKEDLDLPNHLVGLKRSYIKLSFHTV 160

Query: 145  QQLMDVKKDLLHVVERNQAKFDAAEAYESILTG------------KREQRPQDFLDCIVD 192
            + L+ V+K++   V++N+ +  A++ Y ++L+             +  ++  D LD IVD
Sbjct: 161  EDLVKVRKEISPAVKKNREQDHASDEYTTMLSSILQGGSVITDEDETSKKIADQLDNIVD 220

Query: 193  LREYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLLE--KRVDLLQRAEVHVCAFDIETTK 250
            +REYDVPYHIR +ID  +    WY+V        +E  +R DL++R +  V AFDIETTK
Sbjct: 221  MREYDVPYHIRLSIDLRIHVAHWYNVRFRGNAFPVEITRRDDLVERPDPVVLAFDIETTK 280

Query: 251  LPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNVNNE 310
            LPLKFPDA+ D IMMISYM+DGQGYLI NRE V EDIED E+TPKPE+EG F V N  +E
Sbjct: 281  LPLKFPDAETDQIMMISYMIDGQGYLITNREIVSEDIEDFEFTPKPEYEGPFCVFNEPDE 340

Query: 311  IELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDKNQGECRA 370
            + L++ WF H+QE KP I VTYNGD+FDWPF+E RAA HG  M +E+GFQ D +QGE +A
Sbjct: 341  VHLIQRWFEHIQETKPTIMVTYNGDFFDWPFVEARAAIHGLSMYQEIGFQKD-SQGEYKA 399

Query: 371  KFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQMMASYS 430
                H+DC  WVKRDSYLP GS  LKA  KAKLGYDP+E++PEDM R A E+PQ +A+YS
Sbjct: 400  PQCIHMDCLRWVKRDSYLPVGSHNLKAAAKAKLGYDPVELDPEDMCRMATEQPQTLATYS 459

Query: 431  VSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVICPNK 490
            VSDAVATYYLYM YVHPFIF+L TIIPM PDEVLRKGSGTLCE LLMVQA+ AN+I PNK
Sbjct: 460  VSDAVATYYLYMKYVHPFIFALCTIIPMEPDEVLRKGSGTLCEALLMVQAFHANIIFPNK 519

Query: 491  HQSDPEKFYRN-HLLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQLLNNLDRDLQ 549
             + +  K   + H+L++ETY+GGHVE LESGVFRSD+P  F+++P+A++ LL  +++ ++
Sbjct: 520  QEQEFNKLTDDGHMLDAETYVGGHVEALESGVFRSDIPCRFRMNPAAFDFLLQRVEKTMR 579

Query: 550  YAIKVEGKMDLESVSNYDEVKNAIMEKLLRLQEEPIREECPLIYHLDVAAMYPNIILTNR 609
            +AI+ E K+ +E  +N+ EV   I  KL  L++ P R ECPLIYHLDV AMYPNIILTNR
Sbjct: 580  HAIEEEEKVPVEQATNFQEVCEQIKTKLTSLKDVPNRIECPLIYHLDVGAMYPNIILTNR 639

Query: 610  LQPPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYYHLKKQIESE-----F 664
            LQP +IV +  C ACDFN+PG +C RK+ W WRGE     RS+Y+ ++ Q+ESE     F
Sbjct: 640  LQPSAIVDEATCAACDFNKPGASCQRKMAWQWRGEFMPASRSEYHRIQHQLESEKFPPLF 699

Query: 665  VDGTNGHLSKSFLDLPKMEQQSRLKDRLKKYCQKAYKRVLDKPVTELREAGICMRENSFY 724
             +G     +++F +L + EQ    K RL  YC+KAYK++    V E R   IC RENSFY
Sbjct: 700  PEGP----ARAFHELSREEQAKYEKRRLADYCRKAYKKIHVTKVEE-RLTTICQRENSFY 754

Query: 725  VDTVRSFRDRRYEYKGLNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHKCILNS 784
            VDTVR+FRDRRYE+KGL+KVWK KLS A   G++ +++  ++M +LYDSLQLAHKCILNS
Sbjct: 755  VDTVRAFRDRRYEFKGLHKVWKKKLSAAVEVGDASEVKRCKNMEILYDSLQLAHKCILNS 814

Query: 785  FYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLPGSFPE 844
            FYGYVMRKGARWYSMEMAG+V +TGA II  AR LIE+IG+PLELDTDGIWCVLP SFPE
Sbjct: 815  FYGYVMRKGARWYSMEMAGIVCFTGANIITQARELIEQIGRPLELDTDGIWCVLPNSFPE 874

Query: 845  NFTFKTKDLKK-KLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEFEVD 903
            NF  KT + KK KLTISYP  MLN+ V    TN QYQ L +P S TY THSE SI FEVD
Sbjct: 875  NFVIKTTNAKKPKLTISYPGAMLNIMVKEGFTNHQYQELTEPSSLTYVTHSENSIFFEVD 934

Query: 904  GPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFL 963
            GPY AMILPASKEEG  +KKRYAVFN+DG+LAELKGFE+KRRGEL+LIK+FQ+ +F+ FL
Sbjct: 935  GPYLAMILPASKEEGKKLKKRYAVFNEDGSLAELKGFEVKRRGELQLIKIFQSSVFEAFL 994

Query: 964  HGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLADYGEQKSCAV 1023
             GST+EE Y +VA VA+ WLD+L ++  ++ DSEL + ISE+ +MS+ L DYGEQKS ++
Sbjct: 995  KGSTLEEVYGSVAKVADYWLDVLYSKAANMPDSELFELISENRSMSRKLEDYGEQKSTSI 1054

Query: 1024 TTARRLSDFLGDTMVKDKGLRCQYIVACEPQGTPVSERAVPVAIFETDAEIMKFYLRKWC 1083
            +TA+RL++FLGD MVKD GL C+YI++ +P+G+PV+ERA+P+AIF+ +  + K +LRKW 
Sbjct: 1055 STAKRLAEFLGDQMVKDAGLSCRYIISRKPEGSPVTERAIPLAIFQAEPTVRKHFLRKWL 1114

Query: 1084 KTSS--DVGIRSIVDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLYKKVREK 1141
            K+SS  D  IR+I+DW YY +RL SAIQKIITIPAA+Q+V NPVPRV HPDWL+KK+ EK
Sbjct: 1115 KSSSLQDFDIRTILDWDYYIERLGSAIQKIITIPAALQQVKNPVPRVKHPDWLHKKLLEK 1174

Query: 1142 EDKFRQRKLVDIFSSLKKDDFLNKTCNAETNLMDENVEDLED--FPKKRRNSVNGPRPIV 1199
             D ++Q+K+ ++F    K   +     A  N +     D+ED    K   ++V       
Sbjct: 1175 NDIYKQKKISELFVLEGKRQIV--MAQASENSLSLCTPDMEDIGLTKPHHSTVPVATKRK 1232

Query: 1200 RCFEVNNEQKTVKTTDQVDSLRQQLEPSEVSDQQPSSQNAIDTENIDRIVDYKGWLELKK 1259
            R +E   E + +  T         +   EV  Q PS    + T   + +V    WL+  K
Sbjct: 1233 RVWETQKESQDIALT---------VPWQEVLGQPPS----LGTTQEEWLV----WLQFHK 1275

Query: 1260 RKW----KDNLDRRKKQKLGSLRASHQANGVSESLGDMINHKEAQRRTGVGSYFRRQETA 1315
            +KW    +  L  RKKQ+L S     +   + E              TG+GS+ RR   +
Sbjct: 1276 KKWQLQAQQRLALRKKQRLESAEDMPRLGPIREGPS-----------TGLGSFLRRTARS 1324

Query: 1316 MTRCHWQIIQLVPSSQSGVFLAWVVVEGIMVRIPITVPRLFYLNSKDPIVEKFPG-RRVN 1374
            +    WQIIQ+  + Q+G+F  W ++   +  I +++PR+FY+N +    E  P  R+VN
Sbjct: 1325 IMDLPWQIIQISETRQAGLFRLWAIIGNDLHCIKLSIPRVFYVNQRVAKAEDGPAYRKVN 1384

Query: 1375 KTLPHGRRSFNLIEVMIDEDQFRKESKKLAALLADPEVE 1413
            + LP     +NL E  + ED +++   ++   L+ P++E
Sbjct: 1385 RALPRSNIVYNLYEYSVPEDMYQEHINEINTELSVPDIE 1423



 Score =  325 bits (832), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 196/609 (32%), Positives = 320/609 (52%), Gaps = 70/609 (11%)

Query: 1442 LARYAHILWISDDGVPDLGGTSEEDECFA---DEVHQPVLTYPGAYRKVSVELKIHHLSV 1498
            L  + H+LW+S    PDLGG   +D       D+     +   G Y  V VEL I +L+V
Sbjct: 1676 LQHHNHLLWLSPTSRPDLGGKEADDNRLVMEFDDRATVEINSSGCYSTVCVELDIQNLAV 1735

Query: 1499 NALLKSNQVNEMEGGGLFG--FD-------QDMNSG-PYNNELCGFDETTSSAPAFRVVK 1548
            N +L+S+ VN+MEG G  G  FD       +DM +G    + L  +DET   +  FR++K
Sbjct: 1736 NTILQSHHVNDMEGAGSMGISFDVIQQASLEDMVTGNQAASALANYDETALCSSTFRILK 1795

Query: 1549 QLIQRCLTDAVTSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEF 1608
             ++   + +     N++AD  + H YRWL SP S LHDP LHR LH +M+K+F  L+AEF
Sbjct: 1796 SMVVGWVKEITQYHNIYADNQVMHFYRWLQSPCSLLHDPALHRTLHNMMKKLFLQLIAEF 1855

Query: 1609 RKLGATIIFANFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLF 1668
            ++LG+++++ANF+++I+ T K  +  A AY + +  ++ ++E+F  + +     W  LL+
Sbjct: 1856 KRLGSSVVYANFNRIILCTKKRRIEDALAYVEYITNSIHSKEIFHSLTISFSRCWEFLLW 1915

Query: 1669 MDQYNYGGIPARADESL------DDDSQV--------------------------DIV-S 1695
            MD  NYGGI  +   S+      + DSQ                           D++ +
Sbjct: 1916 MDPSNYGGIKGKVPSSIHCGQVKEQDSQAREETDEEEEDKEKDEEEEGMGESEVEDLLEN 1975

Query: 1696 SWNIAEYLPK--EIQDHFVLVVSEFMYIPWKHAQK-----LAASRASLQEGSSCTPSITV 1748
            +WNI ++LP+    Q +F+++VS ++   ++  ++        S    ++G+S     + 
Sbjct: 1976 NWNILQFLPQAASCQSYFLMIVSAYIVAVYQSMKEELRHSAPGSTPVKRKGASQFSQESE 2035

Query: 1749 AAAENFESHIV---QYVKGEIS-SYFTGKLLSIVRDAIHHMKKMNNDQHNSPGVMQTAAN 1804
             A  +    I     YV  E++ S+FT  +   ++  +   +         P  +   ++
Sbjct: 2036 GATGSLPGMITFSQDYVANELTQSFFT--ITQKIQKKVTGSRNTTEPSEMFP--VLPGSH 2091

Query: 1805 IHKVDAPLEFIKHVCAAFALDQNVQHDVLVMRKNLLKYVRVREFAPEAEFRDPCPSFILP 1864
            +   +  LEFIK+VC   +LD N+ + V  + ++LL+ V V EF+ EA+FRDPC S++LP
Sbjct: 2092 LLLNNPALEFIKYVCKVLSLDTNITNQVNKLNRDLLRLVDVGEFSEEAQFRDPCHSYVLP 2151

Query: 1865 NVICSYCNDCRDLDLCRDM------ALLAQDWHCAMPQCGQPYDREVMENALLQIVRQRE 1918
             VIC  CN CRDLDLC+D       A+L Q W C+   C  PYD   +E+AL++ ++++ 
Sbjct: 2152 EVICHSCNFCRDLDLCKDSSFSQDGAILPQ-WLCS--NCQAPYDSSAIESALVEALQRKL 2208

Query: 1919 RLYHLQDLVCIRCNQVKAAHLAEQCACAGSFRCKEDASDFRSKMQIFLNIANRQGFQLLQ 1978
              + LQDLVC++C  +K  H+   C+CAG F        F  +++IF NIA       LQ
Sbjct: 2209 MAFTLQDLVCLKCRGMKETHMPVYCSCAGDFTLTIRTEVFMEQIRIFQNIAKYYSMSYLQ 2268

Query: 1979 ECTSWILEV 1987
            E   W+L+ 
Sbjct: 2269 ETIEWLLQT 2277


>gi|29126874|gb|AAH48166.1| Polymerase (DNA directed), epsilon [Mus musculus]
 gi|38969959|gb|AAH63246.1| Polymerase (DNA directed), epsilon [Mus musculus]
          Length = 2283

 Score = 1429 bits (3700), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 725/1419 (51%), Positives = 972/1419 (68%), Gaps = 67/1419 (4%)

Query: 25   EELEAKLGYDLFSEGDKRLGWLLTFASSSLEDEDTRKVYSCIDLYFVSQDGSTFKSKYKF 84
            ++++ + G++   E  +R GWL+    + + DED R V S +D YF+  DGS FK    +
Sbjct: 42   DKMDLRFGFERLKEPGERTGWLINMHPTEILDEDKRLV-SAVDYYFIQDDGSRFKVALPY 100

Query: 85   RPYFYAATKEKMEMDVEAYLRRRYESQIADIEILEKEDLDLKNHLSGLHKSYLKISFDTV 144
             PYFY A ++  + +V ++L ++++ +IA +E + KEDLDL NHL GL +SY+K+SF TV
Sbjct: 101  MPYFYIAARKGCDREVSSFLSKKFQGKIAKLENVPKEDLDLPNHLVGLKRSYIKLSFHTV 160

Query: 145  QQLMDVKKDLLHVVERNQAKFDAAEAYESILTG------------KREQRPQDFLDCIVD 192
            + L+ V+K++   V++N+ +  A++ Y ++L+             +  ++  D LD IVD
Sbjct: 161  EDLVKVRKEISPAVKKNREQDHASDEYTTMLSSILQGGSVITDEDETSKKIADQLDNIVD 220

Query: 193  LREYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLLE--KRVDLLQRAEVHVCAFDIETTK 250
            +REYDVPYHIR +ID  +    WY+V        +E  +R DL++R +  V AFDIETTK
Sbjct: 221  MREYDVPYHIRLSIDLRIHVAHWYNVRFRGNAFPVEITRRDDLVERPDPVVLAFDIETTK 280

Query: 251  LPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNVNNE 310
            LPLKFPDA+ D IMMISYM+DGQGYLI NRE V EDIED E+TPKPE+EG F V N  +E
Sbjct: 281  LPLKFPDAETDQIMMISYMIDGQGYLITNREIVSEDIEDFEFTPKPEYEGPFCVFNEPDE 340

Query: 311  IELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDKNQGECRA 370
            + L++ WF H+QE KP I VTYNGD+FDWPF+E RAA HG  M +E+GFQ D +QGE +A
Sbjct: 341  VHLIQRWFEHIQETKPTIMVTYNGDFFDWPFVEARAAIHGLSMYQEIGFQKD-SQGEYKA 399

Query: 371  KFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQMMASYS 430
                H+DC  WVKRDSYLP GS  LKA  KAKLGYDP+E++PEDM R A E+PQ +A+YS
Sbjct: 400  PQCIHMDCLRWVKRDSYLPVGSHNLKAAAKAKLGYDPVELDPEDMCRMATEQPQTLATYS 459

Query: 431  VSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVICPNK 490
            VSDAVATYYLYM YVHPFIF+L TIIPM PDEVLRKGSGTLCE LLMVQA+ AN+I PNK
Sbjct: 460  VSDAVATYYLYMKYVHPFIFALCTIIPMEPDEVLRKGSGTLCEALLMVQAFHANIIFPNK 519

Query: 491  HQSDPEKFYRN-HLLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQLLNNLDRDLQ 549
             + +  K   + H+L++ETY+GGHVE LESGVFRSD+P  F+++P+A++ LL  +++ ++
Sbjct: 520  QEQEFNKLTDDGHMLDAETYVGGHVEALESGVFRSDIPCRFRMNPAAFDFLLQRVEKTMR 579

Query: 550  YAIKVEGKMDLESVSNYDEVKNAIMEKLLRLQEEPIREECPLIYHLDVAAMYPNIILTNR 609
            ++I+ E K+ +E  +N+ EV   I  KL  L++ P R ECPLIYHLDV AMYPNIILTNR
Sbjct: 580  HSIEEEEKVPVEQATNFQEVCEQIKTKLTSLKDVPNRIECPLIYHLDVGAMYPNIILTNR 639

Query: 610  LQPPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYYHLKKQIESE-----F 664
            LQP +IV +  C ACDFN+PG +C RK+ W WRGE     RS+Y+ ++ Q+ESE     F
Sbjct: 640  LQPSAIVDEATCAACDFNKPGASCQRKMAWQWRGEFMPASRSEYHRIQHQLESEKFPPLF 699

Query: 665  VDGTNGHLSKSFLDLPKMEQQSRLKDRLKKYCQKAYKRVLDKPVTELREAGICMRENSFY 724
             +G     +++F +L + EQ    K RL  YC+KAYK++    V E R   IC RENSFY
Sbjct: 700  PEGP----ARAFHELSREEQAKYEKRRLADYCRKAYKKIHVTKVEE-RLTTICQRENSFY 754

Query: 725  VDTVRSFRDRRYEYKGLNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHKCILNS 784
            VDTVR+FRDRRYE+KGL+KVWK KLS A   G++ +++  ++M +LYDSLQLAHKCILNS
Sbjct: 755  VDTVRAFRDRRYEFKGLHKVWKKKLSAAVEVGDASEVKRCKNMEILYDSLQLAHKCILNS 814

Query: 785  FYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLPGSFPE 844
            FYGYVMRKGARWYSMEMAG+V +TGA II  AR LIE+IG+PLELDTDGIWCVLP SFPE
Sbjct: 815  FYGYVMRKGARWYSMEMAGIVCFTGANIITQARELIEQIGRPLELDTDGIWCVLPNSFPE 874

Query: 845  NFTFKTKDLKK-KLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEFEVD 903
            NF  KT + KK KLTISYP  MLN+ V    TN QYQ L +P S TY THSE SI FEVD
Sbjct: 875  NFVIKTTNAKKPKLTISYPGAMLNIMVKEGFTNHQYQELTEPSSLTYVTHSENSIFFEVD 934

Query: 904  GPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFL 963
            GPY AMILPASKEEG  +KKRYAVFN+DG+LAELKGFE+KRRGEL+LIK+FQ+ +F+ FL
Sbjct: 935  GPYLAMILPASKEEGKKLKKRYAVFNEDGSLAELKGFEVKRRGELQLIKIFQSSVFEAFL 994

Query: 964  HGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLADYGEQKSCAV 1023
             GST+EE Y +VA VA+ WLD+L ++  ++ DSEL + ISE+ +MS+ L DYGEQKS ++
Sbjct: 995  KGSTLEEVYGSVAKVADYWLDVLYSKAANMPDSELFELISENRSMSRKLEDYGEQKSTSI 1054

Query: 1024 TTARRLSDFLGDTMVKDKGLRCQYIVACEPQGTPVSERAVPVAIFETDAEIMKFYLRKWC 1083
            +TA+RL++FLGD MVKD GL C+YI++ +P+G+PV+ERA+P+AIF+ +  + K +LRKW 
Sbjct: 1055 STAKRLAEFLGDQMVKDAGLSCRYIISRKPEGSPVTERAIPLAIFQAEPTVRKHFLRKWL 1114

Query: 1084 KTSS--DVGIRSIVDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLYKKVREK 1141
            K+SS  D  IR+I+DW YY +RL SAIQKIITIPAA+Q+V NPVPRV HPDWL+KK+ EK
Sbjct: 1115 KSSSLQDFDIRTILDWDYYIERLGSAIQKIITIPAALQQVKNPVPRVKHPDWLHKKLLEK 1174

Query: 1142 EDKFRQRKLVDIFSSLKKDDFLNKTCNAETNLMDENVEDLED--FPKKRRNSVNGPRPIV 1199
             D ++Q+K+ ++F    K   +     A  N +     D+ED    K   ++V       
Sbjct: 1175 NDIYKQKKISELFVLEGKRQIV--MAQASENSLSLCTPDMEDIGLTKPHHSTVPVATKRK 1232

Query: 1200 RCFEVNNEQKTVKTTDQVDSLRQQLEPSEVSDQQPSSQNAIDTENIDRIVDYKGWLELKK 1259
            R +E   E + +  T         +   EV  Q PS    + T   + +V    WL+  K
Sbjct: 1233 RVWETQKESQDIALT---------VPWQEVLGQPPS----LGTTQEEWLV----WLQFHK 1275

Query: 1260 RKW----KDNLDRRKKQKLGSLRASHQANGVSESLGDMINHKEAQRRTGVGSYFRRQETA 1315
            +KW    +  L  RKKQ+L S     +   + E              TG+GS+ RR   +
Sbjct: 1276 KKWQLQAQQRLALRKKQRLESAEDMPRLGPIREGPS-----------TGLGSFLRRTARS 1324

Query: 1316 MTRCHWQIIQLVPSSQSGVFLAWVVVEGIMVRIPITVPRLFYLNSKDPIVEKFPG-RRVN 1374
            +    WQIIQ+  + Q+G+F  W ++   +  I +++PR+FY+N +    E  P  R+VN
Sbjct: 1325 IMDLPWQIIQISETRQAGLFRLWAIIGNDLHCIKLSIPRVFYVNQRVAKAEDGPAYRKVN 1384

Query: 1375 KTLPHGRRSFNLIEVMIDEDQFRKESKKLAALLADPEVE 1413
            + LP     +NL E  + ED +++   ++   L+ P++E
Sbjct: 1385 RALPRSNIVYNLYEYSVPEDMYQEHINEINTELSVPDIE 1423



 Score =  325 bits (833), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 196/609 (32%), Positives = 320/609 (52%), Gaps = 70/609 (11%)

Query: 1442 LARYAHILWISDDGVPDLGGTSEEDECFA---DEVHQPVLTYPGAYRKVSVELKIHHLSV 1498
            L  + H+LW+S    PDLGG   +D       D+     +   G Y  V VEL I +L+V
Sbjct: 1676 LQHHNHLLWLSPTSRPDLGGKEADDNRLVMEFDDRATVEINSSGCYSTVCVELDIQNLAV 1735

Query: 1499 NALLKSNQVNEMEGGGLFG--FD-------QDMNSG-PYNNELCGFDETTSSAPAFRVVK 1548
            N +L+S+ VN+MEG G  G  FD       +DM +G    + L  +DET   +  FR++K
Sbjct: 1736 NTILQSHHVNDMEGAGSMGISFDVIQQASLEDMVTGNQAASALANYDETALCSSTFRILK 1795

Query: 1549 QLIQRCLTDAVTSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEF 1608
             ++   + +     N++AD  + H YRWL SP S LHDP LHR LH +M+K+F  L+AEF
Sbjct: 1796 SMVVGWVKEITQYHNIYADNQVMHFYRWLQSPCSLLHDPALHRTLHNMMKKLFLQLIAEF 1855

Query: 1609 RKLGATIIFANFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLF 1668
            ++LG+++++ANF+++I+ T K  +  A AY + +  ++ ++E+F  + +     W  LL+
Sbjct: 1856 KRLGSSVVYANFNRIILCTKKRRIEDALAYVEYITNSIHSKEIFHSLTISFSRCWEFLLW 1915

Query: 1669 MDQYNYGGIPARADESL------DDDSQV--------------------------DIV-S 1695
            MD  NYGGI  +   S+      + DSQ                           D++ +
Sbjct: 1916 MDPSNYGGIKGKVPSSIHCGQVKEQDSQAREETDEEEEDKEKDEEEEGMGESEVEDLLEN 1975

Query: 1696 SWNIAEYLPK--EIQDHFVLVVSEFMYIPWKHAQK-----LAASRASLQEGSSCTPSITV 1748
            +WNI ++LP+    Q +F+++VS ++   ++  ++        S    ++G+S     + 
Sbjct: 1976 NWNILQFLPQAASCQSYFLMIVSAYIVAVYQSMKEELRHSAPGSTPVKRKGASQFSQESE 2035

Query: 1749 AAAENFESHIV---QYVKGEIS-SYFTGKLLSIVRDAIHHMKKMNNDQHNSPGVMQTAAN 1804
             A  +    I     YV  E++ S+FT  +   ++  +   +         P  +   ++
Sbjct: 2036 GATGSLPGMITFSQDYVANELTQSFFT--ITQKIQKKVTGSRNTTEPSEMFP--VLPGSH 2091

Query: 1805 IHKVDAPLEFIKHVCAAFALDQNVQHDVLVMRKNLLKYVRVREFAPEAEFRDPCPSFILP 1864
            +   +  LEFIK+VC   +LD N+ + V  + ++LL+ V V EF+ EA+FRDPC S++LP
Sbjct: 2092 LLLNNPALEFIKYVCKVLSLDTNITNQVNKLNRDLLRLVDVGEFSEEAQFRDPCHSYVLP 2151

Query: 1865 NVICSYCNDCRDLDLCRDM------ALLAQDWHCAMPQCGQPYDREVMENALLQIVRQRE 1918
             VIC  CN CRDLDLC+D       A+L Q W C+   C  PYD   +E+AL++ ++++ 
Sbjct: 2152 EVICHSCNFCRDLDLCKDSSFSQDGAILPQ-WLCS--NCQAPYDSSAIESALVEALQRKL 2208

Query: 1919 RLYHLQDLVCIRCNQVKAAHLAEQCACAGSFRCKEDASDFRSKMQIFLNIANRQGFQLLQ 1978
              + LQDLVC++C  +K  H+   C+CAG F        F  +++IF NIA       LQ
Sbjct: 2209 MAFTLQDLVCLKCRGMKETHMPVYCSCAGDFTLTIRTEVFMEQIRIFQNIAKYYSMSYLQ 2268

Query: 1979 ECTSWILEV 1987
            E   W+L+ 
Sbjct: 2269 ETIEWLLQT 2277


>gi|363740176|ref|XP_001233985.2| PREDICTED: DNA polymerase epsilon catalytic subunit A [Gallus gallus]
          Length = 2334

 Score = 1429 bits (3700), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 725/1435 (50%), Positives = 983/1435 (68%), Gaps = 60/1435 (4%)

Query: 8    RQDGRRTKKQKLIRSAE--EELEAKLGYDLFSEGDKRLGWLLTFASSSLEDEDTRKVYSC 65
            R DG      K +  ++  ++L+A  G++  +E  +R GWL+    + + DED R V S 
Sbjct: 69   RDDGPALSALKRLERSQRTDQLDALFGFERPAEPCERTGWLINMHPTEVLDEDRRAV-SA 127

Query: 66   IDLYFVSQDGSTFKSKYKFRPYFYAATKEKMEMDVEAYLRRRYESQIADIEILEKEDLDL 125
            +D YF+ +DGS FK    +RPYFY AT++  E +V ++L ++++ +IA +E + KEDLDL
Sbjct: 128  VDYYFIQEDGSRFKVALPYRPYFYVATQQGCEREVSSFLAKKFQGKIAKLETVPKEDLDL 187

Query: 126  KNHLSGLHKSYLKISFDTVQQLMDVKKDLLHVVERNQAKFDAAEAYESILTGK------- 178
             NHL GL + YLK+SF TV +L+ V+K++   V +N+ +  A + Y S+L+         
Sbjct: 188  PNHLVGLKRHYLKLSFSTVDELVKVRKEISPAVRKNRERDQANDVYTSMLSSALAGGSLT 247

Query: 179  -----REQRPQDFLDCIVDLREYDVPYHIRFAIDNDVRCGQWYDVSI--SSTGPLLEKRV 231
                   ++  + +D IVD+REYDVPYH+R +ID  +    WY+V    S+  P + +R 
Sbjct: 248  TSEEGASKKVTNQMDNIVDMREYDVPYHMRLSIDLKIHVAHWYNVRYRGSTFPPEITRRD 307

Query: 232  DLLQRAEVHVCAFDIETTKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLE 291
            DL++R +  V AFDIETTKLPLKFPD + D IMMISYM+DGQGYLI NRE V EDIED E
Sbjct: 308  DLVERPDPVVLAFDIETTKLPLKFPDPETDQIMMISYMIDGQGYLITNREIVSEDIEDFE 367

Query: 292  YTPKPEFEGYFKVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGF 351
            +TPKPE+EG F V N  +E  L++ WF H+QE KP I VTYNGD+FDWPF+E RAA HG 
Sbjct: 368  FTPKPEYEGPFCVFNEPDEAHLIQRWFEHVQETKPTIIVTYNGDFFDWPFVEARAAAHGI 427

Query: 352  KMSEELGFQCDKNQGECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVN 411
             M +E+GFQ D +QGE +A    H+DC  WVKRDSYLP GS  LKA  KAKLGYDP+E++
Sbjct: 428  NMYQEIGFQKD-SQGEYKASQCIHMDCLRWVKRDSYLPVGSHNLKAAAKAKLGYDPVELD 486

Query: 412  PEDMVRFAKEKPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTL 471
            PE+M R A E+PQ +A+YSVSDAVATYY+YM YVHPFIF+L TIIPM PDEVLRKGSGTL
Sbjct: 487  PEEMCRMATEEPQTLATYSVSDAVATYYMYMKYVHPFIFALCTIIPMEPDEVLRKGSGTL 546

Query: 472  CEMLLMVQAYKANVICPNKHQSDPEKFYRN-HLLESETYIGGHVECLESGVFRSDLPTSF 530
            CE LLMVQAY AN+I PNK + +  K   + H+L+SETY+GGHVE LESGVFRSD+P  F
Sbjct: 547  CEALLMVQAYHANIIFPNKQEQEFNKLTEDGHVLDSETYVGGHVEALESGVFRSDIPCRF 606

Query: 531  KLDPSAYEQLLNNLDRDLQYAIKVEGKMDLESVSNYDEVKNAIMEKLLRLQEEPIREECP 590
            K++P+A++ L+ N+++ L++AI+ E ++ L+ V+N+ EV + I  KL  L++ P R ECP
Sbjct: 607  KMNPAAFDYLVQNVEKTLRHAIEEEERLPLDQVTNFQEVCDEIKVKLNSLKDVPNRIECP 666

Query: 591  LIYHLDVAAMYPNIILTNRLQPPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEIFMGKR 650
            LIYHLDV AMYPNIILTNRLQP ++V +  C ACDFN+PG  C R++ W WRGE     R
Sbjct: 667  LIYHLDVGAMYPNIILTNRLQPSAMVDEATCAACDFNKPGANCQRRMTWQWRGEFMSASR 726

Query: 651  SDYYHLKKQIESE-----FVDGTNGHLSKSFLDLPKMEQQSRLKDRLKKYCQKAYKRVLD 705
            S+Y+ +++Q+ESE     + DG      ++F +L + EQ    K RL  YC+KAYK++  
Sbjct: 727  SEYHRIQQQLESEKFPPLYPDGA----PRAFHELSREEQAKYEKKRLADYCRKAYKKIHV 782

Query: 706  KPVTELREAGICMRENSFYVDTVRSFRDRRYEYKGLNKVWKGKLSEAKASGNSIKIQEAQ 765
              V E R   IC RENSFYVDTVR+FRDRRYE+KGL+KVWK KLS A  +G++ +++  +
Sbjct: 783  TKVEE-RVTTICQRENSFYVDTVRAFRDRRYEFKGLHKVWKKKLSAAMETGDASEVKRCK 841

Query: 766  DMVVLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGK 825
            +M +LYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAG+V +TGA II  AR LIE+IG+
Sbjct: 842  NMEILYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGIVCFTGANIITQARELIEQIGR 901

Query: 826  PLELDTDGIWCVLPGSFPENFTFKTKDLKK-KLTISYPCVMLNVDVARNNTNDQYQTLVD 884
            PLELDTDGIWCVLP SFPENF  K+ + KK K+TISYP  MLN+ V    TNDQYQ L D
Sbjct: 902  PLELDTDGIWCVLPNSFPENFVIKSTNAKKPKVTISYPGAMLNILVKEGFTNDQYQELQD 961

Query: 885  PVSKTYETHSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKR 944
            P S TY T SE SI FEVDGPY AMILPASKEEG  +KKRYAVFN+DG+LAELKGFE+KR
Sbjct: 962  PASLTYVTRSENSIFFEVDGPYLAMILPASKEEGKKLKKRYAVFNEDGSLAELKGFEVKR 1021

Query: 945  RGELKLIKVFQAELFDKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISE 1004
            RGEL+L+K+FQ+ +F+ FL G+T+EE Y++VA VA+ WLD+L ++  ++ DSEL + ISE
Sbjct: 1022 RGELQLVKIFQSSVFEAFLKGTTLEEVYASVAKVADYWLDVLYSKAANMPDSELFELISE 1081

Query: 1005 SSTMSKSLADYGEQKSCAVTTARRLSDFLGDTMVKDKGLRCQYIVACEPQGTPVSERAVP 1064
            + +MS+ L DYGEQKS +++TA+RL++FLGD MVKD GL C++I++ +P+G+PV+ERA+P
Sbjct: 1082 NRSMSRKLEDYGEQKSTSISTAKRLAEFLGDQMVKDAGLSCRFIISKKPEGSPVTERAIP 1141

Query: 1065 VAIFETDAEIMKFYLRKWCKTSS--DVGIRSIVDWSYYKQRLSSAIQKIITIPAAMQKVS 1122
            +AIF+ +  + K YLRKW K+ S  D  IR+I+DW YY +RL S IQKIITIPAA+Q+V 
Sbjct: 1142 LAIFQAEPSVRKHYLRKWLKSPSLQDFNIRAILDWDYYIERLGSTIQKIITIPAALQQVK 1201

Query: 1123 NPVPRVVHPDWLYKKVREKEDKFRQRKLVDIFSSLKKDDFLNKTCNAETNLMDENVEDLE 1182
            NPVPRV HPDWL+KK+ EK D ++Q+K+ ++F+S  K   L       T      V D+E
Sbjct: 1202 NPVPRVRHPDWLHKKLLEKNDVYKQKKINELFTSEGKRQVLANQPQEGTP--SSQVGDIE 1259

Query: 1183 DFPKKRRNSVNGPRPIVRCFEVNNEQKTVKTTDQVDSLRQQLEPSEVSDQ---QPSSQNA 1239
            DF   +  S++   PI       N++K V T ++   + Q LE S+   +    P S   
Sbjct: 1260 DFGAAK--SLHPSVPIA------NKRKRVPTAEESQQMSQSLELSQSWREILGPPPSMGT 1311

Query: 1240 IDTENIDRIVDYKGWLELKKRKWKDNLDRRKKQKLGSLRASHQANGVSESLGDMINHKEA 1299
               E +        WL   ++KW+    +R++++                + D ++    
Sbjct: 1312 TKEELV-------AWLRFHQKKWELQARQRRERQKRRRLEDGGTAAGGGVVRDALSR--- 1361

Query: 1300 QRRTGVGSYFRRQETAMTRCHWQIIQLVPSSQSGVFLAWVVVEGIMVRIPITVPRLFYLN 1359
                G+GSY R    ++    WQI+Q+  +SQ G+F  W V+   +  I +++PR+FY+N
Sbjct: 1362 ----GLGSYLRHTARSILDLPWQIVQIAETSQPGLFRLWAVIGSDLHCIKLSIPRVFYVN 1417

Query: 1360 SKDPIVEKFPG-RRVNKTLPHGRRSFNLIEVMIDEDQFRKESKKLAALLADPEVE 1413
             +    E+    R+VN+ LP     +NL E  + ED +++   ++ A L+ P++E
Sbjct: 1418 QRVAKPEEGAVYRKVNRILPRSNLVYNLYEYSVPEDMYQEHINEINADLSAPDIE 1472



 Score =  315 bits (808), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 195/613 (31%), Positives = 310/613 (50%), Gaps = 80/613 (13%)

Query: 1442 LARYAHILWISDDGVPDLGGTSEEDECFA---DEVHQPVLTYPGAYRKVSVELKIHHLSV 1498
            L R+ H+LW+S    PDLGG   +D       DE     +  PG Y  V +EL I  L+V
Sbjct: 1725 LRRHNHLLWLSPTARPDLGGKEADDNRLVMEFDERASVEINNPGCYSTVCLELDIQSLAV 1784

Query: 1499 NALLKSNQVNEMEGGGLFG--FD-------QDMNSG-PYNNELCGFDETTSSAPAFRVVK 1548
            N +L+S+ VN+MEG       FD       +DM +G    N    +DET   +  FR++K
Sbjct: 1785 NTVLQSHHVNDMEGCSSMSISFDVIQQASLEDMVTGNQAANIPASYDETALCSNTFRILK 1844

Query: 1549 QLIQRCLTDAVTSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEF 1608
             ++   + +     N++AD  + H YRWL SP S L+DP LHR LH +M+K+F  L+AEF
Sbjct: 1845 SMVVSWVKEITQYHNIYADNQVIHFYRWLRSPSSLLYDPALHRTLHNMMKKLFLQLVAEF 1904

Query: 1609 RKLGATIIFANFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLF 1668
            R+LG+++++ANF+++I+ T K  +  A +Y + ++ ++ ++E+F  + +     W  LL+
Sbjct: 1905 RRLGSSVVYANFNRIILCTKKRRIEDAISYMEYIINSIHSKEIFHSLTISFSRCWEFLLW 1964

Query: 1669 MDQYNYGGIPARADESLD-----------------------------------DDSQVDI 1693
            MD  NYGGI  +    +                                     + +  +
Sbjct: 1965 MDPANYGGIKGKVHSRIHCGEVREREHSGKQAPEEGDSEEEEEAGEDDEEEGESNVEELL 2024

Query: 1694 VSSWNIAEYLPK--EIQDHFVLVVSEFMYIPWKHAQKLAASR---ASLQEGSSCTPSITV 1748
             +SWNI ++LP+    Q++F+++VS ++   + H+ K    R    S       T  +T 
Sbjct: 2025 ENSWNIVQFLPQAASCQNYFLMIVSAYIVAVY-HSMKEELRRNAPGSTPVKRRGTSQVTQ 2083

Query: 1749 AAAENFESH--IVQYVKGEISSYFTGKLLSIVRDAIHHMKKMNNDQHNS---------PG 1797
             A     +   ++ + +  +++  T    +I +      KKM+  +H +         PG
Sbjct: 2084 EAQGETGAMPGMITFSQDYVANELTQSFFTITQKI---QKKMSGSRHTTEPSDLFPVLPG 2140

Query: 1798 VMQTAANIHKVDAPLEFIKHVCAAFALDQNVQHDVLVMRKNLLKYVRVREFAPEAEFRDP 1857
                  N       LEFIK+VC   +LD NV + V  +R++LL+ + V EF+ EA+FRDP
Sbjct: 2141 SYLPLNN-----PALEFIKYVCQVLSLDANVTNQVNKLRRDLLRLIEVGEFSDEAQFRDP 2195

Query: 1858 CPSFILPNVICSYCNDCRDLDLCRDMAL-----LAQDWHCAMPQCGQPYDREVMENALLQ 1912
            C S++LP VIC  CN CRDLDLC+D AL     L   W C+   C   YD + +E AL++
Sbjct: 2196 CRSYVLPEVICRNCNFCRDLDLCKDPALSQDGSLLPSWVCS--NCQAQYDSDSIEMALVE 2253

Query: 1913 IVRQRERLYHLQDLVCIRCNQVKAAHLAEQCACAGSFRCKEDASDFRSKMQIFLNIANRQ 1972
             ++++   + LQDLVC +C+ VK  H+   C+CAG F     +  F   + +F NIA   
Sbjct: 2254 ALQKKLMAFMLQDLVCKKCHGVKDTHMPLYCSCAGDFALTISSQTFMEHITVFQNIARHY 2313

Query: 1973 GFQLLQECTSWIL 1985
            G   L E   W+L
Sbjct: 2314 GMAHLLETIEWLL 2326


>gi|412988018|emb|CCO19414.1| DNA polymerase epsilon catalytic subunit A [Bathycoccus prasinos]
          Length = 2587

 Score = 1428 bits (3697), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 749/1458 (51%), Positives = 976/1458 (66%), Gaps = 133/1458 (9%)

Query: 59   TRKVYSCIDLYFVSQDGSTFKSKYKFRPYFYAATKEKMEMDVEAYLRRRYESQIADIEIL 118
             +K ++ ++LYF  QDGS FK + K+ PYF  AT    E +VEAY+RR+++  + ++E++
Sbjct: 190  AQKPHAAVNLYFSCQDGSVFKVQKKYAPYFMLATSPGSEHEVEAYVRRKHKEHVKEVELV 249

Query: 119  EKEDLDLKNHLSGLHKSYLKISFDTVQQLMDVKKDLLHVVERNQAKFDAAEAYESI---- 174
            +KEDLDLKNHLSGL ++YLKISF T   + + +++LL +VE+N+AK +A+ AY+++    
Sbjct: 250  DKEDLDLKNHLSGLKQTYLKISFYTQSGMYECRRELLPIVEKNKAKSNASVAYQALHEQD 309

Query: 175  -----------------LTGKR------EQRPQDFLDCIVDLREYDVPYHIRFAIDNDVR 211
                               GKR      ++   D+ D ++D+REYDVPYH+R+ ID++VR
Sbjct: 310  ALNAHENGGGNDAMQTDARGKRVFENSKKKTFTDYEDAMLDIREYDVPYHMRYMIDSEVR 369

Query: 212  CGQWYDVS--ISSTGPLLEKRVDLLQRAEVHVCAFDIETTKLPLKFPDADYDIIMMISYM 269
            CG WYDV   I     ++  R DL +RAEV VCAFDIETTKLPLKFPDA++D + MISYM
Sbjct: 370  CGHWYDVKVEIGDGDVIITHRPDLKRRAEVRVCAFDIETTKLPLKFPDAEFDQVFMISYM 429

Query: 270  LDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNVNNEIELLRLWFAHMQEVKPGIY 329
            LDGQGYLIINRE V ED +D EY PKPE+ G F V N  +E  LLR WF HM++ +P +Y
Sbjct: 430  LDGQGYLIINREVVSEDCDDFEYNPKPEYPGPFIVWNEPDEKALLRRWFDHMRDAQPNVY 489

Query: 330  VTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDKNQGECRAKFACHLDCFAWVKRDSYLP 389
            VTYNGDYFD+PF+ETRA  HG  M  E+GF+   + GE R+KFA HLD F WVKRDSYLP
Sbjct: 490  VTYNGDYFDFPFIETRAKKHGMSMYREIGFR-GSDSGETRSKFALHLDAFHWVKRDSYLP 548

Query: 390  QGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQMMASYSVSDAVATYYLYMTYVHPFI 449
             GS GLKAVTK  L ++P+EV+PEDM+ FA+ +PQ MA+YSVSDAV+TYYLYM YVHPFI
Sbjct: 549  AGSHGLKAVTKKLLKFNPIEVDPEDMLPFARSQPQTMAAYSVSDAVSTYYLYMKYVHPFI 608

Query: 450  FSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVICPNKHQSDPEKFYRNHLLESETY 509
            FSLATIIP++PDEVLRKGSGTLCE LLMV+AY+ N++CPNK +   E+ +  H LESETY
Sbjct: 609  FSLATIIPLTPDEVLRKGSGTLCESLLMVEAYRGNIVCPNKQRGAGEQHFNGHPLESETY 668

Query: 510  IGGHVECLESGVFRSDLPTSFKLDPSAYEQLLNNLDRDLQYAIKVEGKMDLE-SVSNYDE 568
            IGGHVECL+SGVFRSD+P  FKL+P  Y++L++ +D DL+YA++ EGK   E  V NY E
Sbjct: 669  IGGHVECLQSGVFRSDIPVKFKLEPKGYQKLIDAVDDDLRYALEHEGKGATEDDVENYKE 728

Query: 569  VKNAIMEKLLRLQEEPIREECPLIYHLDVAAMYPNIILTNRLQPPSIVTDEVCTACDFNR 628
            ++  I++KL  L++ P  E  PLIYHLDVAAMYPNIILTNRLQP + V +++C +CDFNR
Sbjct: 729  IREGIVKKLEELRDNPNCEVNPLIYHLDVAAMYPNIILTNRLQPMANVNEDICASCDFNR 788

Query: 629  PGKTCLRKLEWVWRGEIFMGKRSDYYHLKKQIESE-FVDGTNGHLSKSFLDLPKMEQQSR 687
            PGKTCLR++EW WRGE +    SDY  +K Q++ E F     G   + + DL + EQ+  
Sbjct: 789  PGKTCLREMEWTWRGEHYSATSSDYAQIKAQLQIERFPPLIPGEPKRFWKDLSRQEQEIA 848

Query: 688  LKDRLKKYCQKAYKRVLDKPVTELREAGICMRENSFYVDTVRSFRDRRYEYKGLNKVWKG 747
             K RLK Y QK Y++V++KPV E +++ ICM+ENSFY+DTVR+FRDRRYEYKGLNK WKG
Sbjct: 849  KKTRLKMYSQKVYRKVMEKPVVETKKSSICMKENSFYIDTVRTFRDRRYEYKGLNKQWKG 908

Query: 748  KLSEAKASGNSIKIQEAQDMVVLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTY 807
            +LS AK  GN I+ +EA DMV LYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVT 
Sbjct: 909  RLSAAKQEGNPIETKEAADMVTLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTL 968

Query: 808  TGAKIIQNARLLIEKIGKPLELDTDGIWCVLPGSFPENFTFK-----TKDLKKKLTISYP 862
            TGA+IIQ A+ L++ IG PLELDTDGIWC LPG+FPE +TF+     +  +KKKL +SYP
Sbjct: 969  TGARIIQMAKQLVDDIGMPLELDTDGIWCCLPGTFPEEYTFEPNSDGSGKMKKKLKVSYP 1028

Query: 863  CVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEFEVDGPYKAMILPASKEEGILIK 922
            CV+LN        NDQYQTLVDP  + Y+  SE SIEFEVDGPY+AMILPASKEEG+LIK
Sbjct: 1029 CVVLNRMTDLLTRNDQYQTLVDPEKQIYKQSSEMSIEFEVDGPYRAMILPASKEEGVLIK 1088

Query: 923  KRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFD-----KFLHGSTIEECYSAVAA 977
            KRYAVFN DG+L ELKGFE+KRRGELKLIKVFQ+ELF+      FL G T+EE Y  V  
Sbjct: 1089 KRYAVFNHDGSLEELKGFELKRRGELKLIKVFQSELFEDSGSSPFLGGQTLEEVYKRVGD 1148

Query: 978  VANRWLDLLDNQGKDIADSELIDYISESSTMSKSLADYGEQKSCAVTTARRLSDFL-GDT 1036
            +ANR LD+LD +G++I D +LIDYISESS MSKSLA+YG++KS +VTTARRL+ FL    
Sbjct: 1149 IANRLLDMLDTKGEEIDDEQLIDYISESSVMSKSLAEYGDRKSTSVTTARRLAQFLEAPD 1208

Query: 1037 MVKDKGLRCQYIVACEPQGTPVSERAVPVAIFETDAEIMKFYLRKWCKTS--SDVG---- 1090
            +VKDKGL C+YI++ +P G P S+RA+PV++F +   + + YLR+W K +   + G    
Sbjct: 1209 LVKDKGLVCKYIISAKPHGAPTSQRAIPVSVFSSTPAVARKYLREWLKDAPPGEAGEMPD 1268

Query: 1091 IRSIVDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLYKKVREKEDKFRQRKL 1150
            +R I+DW YYK RL  A+QKII++PAA+Q V NP P VVHPDWL K++RE +DK +Q KL
Sbjct: 1269 LRDILDWEYYKGRLRGAVQKIISLPAALQNVKNPCPGVVHPDWLNKRIRELKDKRKQIKL 1328

Query: 1151 VDI--FSSLKKDDFLNKTCNAETNLMDENVED-------------LEDFPKKRRNSVNGP 1195
              +  FS   KD++L +   +E    DE+ ED             +EDF   R     G 
Sbjct: 1329 DSMTGFSRQTKDEYLEQLNFSE----DEDEEDTRNEDNDNDDEHDMEDFGAARITPARGA 1384

Query: 1196 RPIVRCFEVNNEQKTVKTTDQVDSLRQQLEPSEVSDQQPSSQNAIDTENIDRIVDYKGWL 1255
            R  VR F+ + +        +   +     P+      P+S  A   E+       KGW 
Sbjct: 1385 R--VRVFQRHRDTGHHHGGPRTPPIGNMNLPA----PDPNSDYASWLEHA-----TKGWR 1433

Query: 1256 ----ELKKRKWKDNLD--RRKKQKLGSLRASHQANGVSESLGDMINHKEAQRRTGVGSYF 1309
                E ++RK +++L+  RR+++ L   +  H AN  S  +G M              + 
Sbjct: 1434 IKRKEKRERKHREDLEDQRREREGLPRQKRRHSANDDS-VIGQM------------DLFL 1480

Query: 1310 RRQETAMTRCHWQIIQL-------VPSS-----------QSGVFLAWVVVEGIMVRIPIT 1351
               + ++    WQI+ +        PSS            +GVF  WVV +G M  + ++
Sbjct: 1481 ENVDESLATSPWQIVSIDDYSRGNAPSSLEDGGAEVEEPPAGVFRVWVVADGAMRSVLLS 1540

Query: 1352 VPRLFYLNSKDPIVEKFPG----RRVNKTLPH-----------GRRSFNLIEVMIDEDQF 1396
             PR  Y+ +  P  E   G    +RVN  LP            G  + N+ EV  D  + 
Sbjct: 1541 APRKVYVATHHPDPEGDRGLNGKKRVNVALPRAQNTNNFMTADGTSTLNVYEVEFDASKL 1600

Query: 1397 R--KESKKLAALLADPEV 1412
               +  + +AALLAD  V
Sbjct: 1601 SAVQYGRDVAALLADKNV 1618



 Score =  213 bits (541), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 119/378 (31%), Positives = 191/378 (50%), Gaps = 69/378 (18%)

Query: 1415 LGWQQNAAKIGMQRCAASSQWFNERISLARYAHI-------------------------- 1448
            + WQ++AA++   R A +S+   + I ++RYAHI                          
Sbjct: 1885 IAWQRDAAQLAAIRLAHTSKHLEKSIQISRYAHIPLCNLDSDWSTHVLDTFFARRLRDEH 1944

Query: 1449 --LWISDDGVPDLGGTSEEDECFA----DEVHQPV--LTYPGAYRKVSVELKIHHLSVNA 1500
              LW   +G PD GG S +D+  +    + +  P   L+  G YR V  EL++HHL V A
Sbjct: 1945 QVLWSGKNGKPDYGGGSMDDQLSSTLTLESMESPRCELSKSGVYRSVCCELRVHHLVVCA 2004

Query: 1501 LLKSNQVNEMEGGGLFGFDQDMNSGPYNNELCGFDETTSSAPAFRVVKQLIQRCLTDAVT 1560
            ++ S+ +N++E G L GFD         N          ++ AFR +++++   L DA  
Sbjct: 2005 IVNSHILNDLEQGALLGFDG-------GNATVADRGGHDASNAFRTLRKMVAEMLRDASE 2057

Query: 1561 SGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEFRKLGATIIFANF 1620
             GN  ADA L  L RW+ S +S++ +P L  ++    +KVF +L++E  +LGA ++FA+ 
Sbjct: 2058 RGNEIADATLAQLRRWIFSSNSRMREPGLQHLVELCSRKVFTLLISELNRLGADVVFADT 2117

Query: 1621 SKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLFMDQYNYGGIPA- 1679
             +VI+ T K  L++A A+   L  AL TRELF W+ELEP   WH+LLF   +++GG+ A 
Sbjct: 2118 RRVIVSTKKNSLASASAFITGLRNALGTRELFNWLELEPTKVWHTLLFRGPHDFGGLAAD 2177

Query: 1680 -----------------RADESLDDDSQVD----------IVSSWNIAEYLPKEIQDHFV 1712
                                E++  D+Q+D          +   WNIA +LP+ + DHF 
Sbjct: 2178 ETVLQKLFLNNGAGEAPMETENVPTDTQLDPHAVEGDEASLEMHWNIATFLPEALSDHFK 2237

Query: 1713 LVVSEFMYIPWKHAQKLA 1730
             +  +F+ +PWK  ++L 
Sbjct: 2238 AIAGDFIVLPWKRERELG 2255



 Score =  146 bits (369), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 82/233 (35%), Positives = 113/233 (48%), Gaps = 14/233 (6%)

Query: 1755 ESHIVQYVKGEISSYFTGKLLSIVRDAIHHMKKMNNDQ----------HNSPGVMQTAAN 1804
            E     ++  +I S+FT K+L + R    H  +  +             N PG      N
Sbjct: 2348 EEEKATWLCAQIDSHFTPKILQVARGFEKHASRSTHGATRLDKRYLFPENLPGAH--LPN 2405

Query: 1805 IHKVDAPLEFIKHVCAAFALDQNVQHDVLVMRKNLLKYVRVREFAPEAEFRDPCPSFILP 1864
              + +A L F+K V A  +LD  ++  V   RKN LK + V EF PEA FR+PC SF L 
Sbjct: 2406 HLRGNAALAFVKTVIAVLSLDDTIEDAVARCRKNALKLLSVPEFGPEARFREPCISFALR 2465

Query: 1865 NVICSYCNDCRDLDLCRDMALLAQDWHCAMPQCGQPYDREVMENALLQIVRQRERLYHLQ 1924
            +V+C  C D RDLDLCRD  L   +W CA  +C   YD + +E  L   V  R R    Q
Sbjct: 2466 DVVCECCGDVRDLDLCRDPDLADGEWRCA--ECENRYDLQWIEMKLCDEVNARVRKAQTQ 2523

Query: 1925 DLVCIRCNQVKAAHLAEQCACAGSFRCKEDASDFRSKMQIFLNIANRQGFQLL 1977
            DL C RC ++K  H+  +C C G F         R  +++F N+A    F +L
Sbjct: 2524 DLKCKRCTRIKVGHVQNRCPCGGLFETTSKPGALRDGLRVFRNVARWHEFDVL 2576


>gi|194214443|ref|XP_001915746.1| PREDICTED: LOW QUALITY PROTEIN: DNA polymerase epsilon catalytic
            subunit A-like [Equus caballus]
          Length = 2320

 Score = 1428 bits (3696), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 731/1438 (50%), Positives = 982/1438 (68%), Gaps = 61/1438 (4%)

Query: 4    RRWDRQDGRRTKKQKLIRSA-EEELEAKLGYDLFSEGDKRLGWLLTFASSSLEDEDTRKV 62
            RR D      +  ++L RS   ++++ + G++   E  ++ GWL+    + + DED R V
Sbjct: 54   RRDDGPSSSVSALKRLERSQWTDKMDLRFGFERLREPGEKTGWLINMHPTEVLDEDKRLV 113

Query: 63   YSCIDLYFVSQDGSTFKSKYKFRPYFYAATKEKMEMDVEAYLRRRYESQIADIEILEKED 122
             S +D YF+  DGS FK    ++PYFY AT++  E +V ++L ++++ +IA +E + KED
Sbjct: 114  -SAVDYYFIQDDGSRFKVALPYKPYFYIATRKGCEREVSSFLSKKFQGKIAKVETVPKED 172

Query: 123  LDLKNHLSGLHKSYLKISFDTVQQLMDVKKDLLHVVERNQAKFDAAEAYESILTG----- 177
            LDL NHL GL ++Y+K+SF+TV+ L+ V+K++   V++N+ +  A++AY ++L+      
Sbjct: 173  LDLPNHLVGLKRNYIKLSFNTVEDLVRVRKEISPAVKKNREQGRASDAYTAMLSSVLQGG 232

Query: 178  -------KREQRPQDFLDCIVDLREYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLLE-- 228
                   +  ++  D LD IVD+REYDVPYHIR +ID  +    WY+V        +E  
Sbjct: 233  SVIIDEEETSKKMADQLDNIVDMREYDVPYHIRLSIDLKIHVAHWYNVRYRGNAFPVEIA 292

Query: 229  KRVDLLQRAEVHVCAFDIETTKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIE 288
            +R DL++R +  V AFDIETTKLPLKFPDA+ D IMMISYM+DGQGYLI NRE V EDIE
Sbjct: 293  RRDDLVERPDPVVLAFDIETTKLPLKFPDAETDQIMMISYMIDGQGYLITNREIVSEDIE 352

Query: 289  DLEYTPKPEFEGYFKVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAH 348
            D E+TPKPE+EG F V N  +E+ L++ WF H+QE KP I VTYNGD+FDWPF+E RAA 
Sbjct: 353  DFEFTPKPEYEGPFCVFNEPDEVHLIQRWFEHVQETKPTIMVTYNGDFFDWPFVEARAAV 412

Query: 349  HGFKMSEELGFQCDKNQGECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPL 408
            HG  M +E+GFQ D NQGE +A    H+DC  WVKRDSYLP GS  LKA  KAKLGYDP+
Sbjct: 413  HGLSMYQEIGFQKD-NQGEYKAPQCIHMDCLRWVKRDSYLPVGSHNLKAAAKAKLGYDPV 471

Query: 409  EVNPEDMVRFAKEKPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGS 468
            E++PEDM R A E+PQ +A+YSVSDAVATYYLYM YVHPFIF+L TIIPM PDEVLRKGS
Sbjct: 472  ELDPEDMCRMATEQPQTLATYSVSDAVATYYLYMKYVHPFIFALCTIIPMEPDEVLRKGS 531

Query: 469  GTLCEMLLMVQAYKANVICPNKHQSDPEKFYRN-HLLESETYIGGHVECLESGVFRSDLP 527
            GTLCE LLMVQA+ AN+I PNK + +  K   + H+L++ETY+GGHVE LESGVFRSD+P
Sbjct: 532  GTLCEALLMVQAFHANIIFPNKQEQEFNKLTDDGHVLDAETYVGGHVEALESGVFRSDIP 591

Query: 528  TSFKLDPSAYEQLLNNLDRDLQYAIKVEGKMDLESVSNYDEVKNAIMEKLLRLQEEPIRE 587
              F+++P+A++ LL  +++ L++AI+ E K+ +E V+N+ EV + I  KL  L++ P R 
Sbjct: 592  CRFRMNPAAFDFLLQRVEKTLRHAIEEEEKVPVEQVTNFQEVCDQIKTKLTSLKDVPNRI 651

Query: 588  ECPLIYHLDVAAMYPNIILTNRLQPPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEIFM 647
            ECPLIYHLDV AMYPNIILTNRLQP ++V +  C ACDFN+PG  C RK+ W WRGE   
Sbjct: 652  ECPLIYHLDVGAMYPNIILTNRLQPSAMVDEATCAACDFNKPGANCQRKMAWQWRGEFMP 711

Query: 648  GKRSDYYHLKKQIESE-FVDGTNGHLSKSFLDLPKMEQQSRLKDRLKKYCQKAYKRVLDK 706
              RS+Y+ ++ Q+ESE F   T    +++F +L + EQ    K RL  YC+KAYK++   
Sbjct: 712  ASRSEYHRIQHQLESEKFPPLTPEGPARAFHELSREEQAKYEKRRLADYCRKAYKKIHVT 771

Query: 707  PVTELREAGICMRENSFYVDTVRSFRDRRYEYKGLNKVWKGKLSEAKASGNSIKIQEAQD 766
             V E R   IC RENSFYVDTVR+FRDRRYE+KGL+KVWK KLS A   G++ +++  ++
Sbjct: 772  KVEE-RLTTICQRENSFYVDTVRAFRDRRYEFKGLHKVWKKKLSAAVEVGDAAEVKRCRN 830

Query: 767  MVVLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKP 826
            M VLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAG+V +TGA II  AR LIE+IG+P
Sbjct: 831  MEVLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGIVCFTGANIITQARELIEQIGRP 890

Query: 827  LELDTDGIWCVLPGSFPENFTFKTKDLKK-KLTISYPCVMLNVDVARNNTNDQYQTLVDP 885
            LELDTDGIWCVLP SFPENF  KT  +KK K+TISYP  MLN+ V    TNDQYQ L +P
Sbjct: 891  LELDTDGIWCVLPNSFPENFVVKTTSVKKPKVTISYPGAMLNIMVKEGFTNDQYQELAEP 950

Query: 886  VSKTYETHSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRR 945
             S TY T SE SI FEVDGPY AMILPASKEEG  +KKRYAVFN+DG+LAELKGFE+KRR
Sbjct: 951  SSLTYVTRSENSIFFEVDGPYLAMILPASKEEGKKLKKRYAVFNEDGSLAELKGFEVKRR 1010

Query: 946  GELKLIKVFQAELFDKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISES 1005
            GEL+LIK+FQ+ +F+ FL GST+EE Y +VA VA+ WLD+L ++  ++ DSEL + ISE+
Sbjct: 1011 GELQLIKIFQSSVFEAFLKGSTLEEVYGSVAKVADYWLDVLYSKAANMPDSELFELISEN 1070

Query: 1006 STMSKSLADYGEQKSCAVTTARRLSDFLGDTMVKDKGLRCQYIVACEPQGTPVSERAVPV 1065
             +MS+ L DYGEQKS +++TA+RL++FLGD MVKD GL C+YI++ +P+G+PV+ERA+P+
Sbjct: 1071 RSMSRKLEDYGEQKSTSISTAKRLAEFLGDQMVKDAGLSCRYIISRKPEGSPVTERAIPL 1130

Query: 1066 AIFETDAEIMKFYLRKWCKTSS--DVGIRSIVDWSYYKQRLSSAIQKIITIPAAMQKVSN 1123
            AIF+ +  + K +LRKW K+SS  +  IR+I+DW YY +RL SAIQKIITIPAA+Q+V N
Sbjct: 1131 AIFQAEPTVRKHFLRKWLKSSSLQEFDIRTILDWDYYIERLGSAIQKIITIPAALQQVKN 1190

Query: 1124 PVPRVVHPDWLYKKVREKEDKFRQRKLVDIFSSLKKDDFLNKTCNAETNLMDENVEDLED 1183
            PVPRV HPDWL+KK+ EK D ++Q+K+ ++F    K           T  +     D+ED
Sbjct: 1191 PVPRVKHPDWLHKKLLEKNDIYKQKKISELFILEGKRQIGMAQVPEGTQSL--GAPDMED 1248

Query: 1184 FPKKRRNSVNGPRPIVRCFEVNNEQKTVKTTDQVDSLRQQLEPS----EVSDQQPSSQNA 1239
            F           +P+     +  ++K V    Q +S  Q LE +    E+  Q P    A
Sbjct: 1249 F--------GLAKPLPSAVPIATKRKRVLWESQEES--QDLELTVPWQEILGQPP----A 1294

Query: 1240 IDTENIDRIVDYKGWLELKKRKWKDNLDRRKKQKLGSLRASHQANGVSESLGDMINHKEA 1299
            + T   + +V    WL   K+KW          +L S +   +       + +      A
Sbjct: 1295 LGTTQEEWLV----WLRFHKKKW----------QLQSRQRLARKKRRRLEVAEGAPRPGA 1340

Query: 1300 QR---RTGVGSYFRRQETAMTRCHWQIIQLVPSSQSGVFLAWVVVEGIMVRIPITVPRLF 1356
             R    TG+G + RR   ++    WQI+Q+  +SQ G+F  W V+   +  I + +PR+F
Sbjct: 1341 IRDRPTTGLGGFLRRTARSILDLPWQIVQISETSQPGLFRLWAVISSDLYCIKLNIPRVF 1400

Query: 1357 YLNSKDPIVEKFPG-RRVNKTLPHGRRSFNLIEVMIDEDQFRKESKKLAALLADPEVE 1413
            Y+N +    E+ P  R+VN+ LP     +NL E  + ED +++   ++   L+ P++E
Sbjct: 1401 YVNQRVAKAEEGPSYRKVNRVLPRSNMVYNLYEYSVPEDMYQEHINEINTELSAPDIE 1458



 Score =  309 bits (792), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 189/606 (31%), Positives = 303/606 (50%), Gaps = 64/606 (10%)

Query: 1442 LARYAHILWISDDGVPDLGGTSEEDECFADEVHQPV---LTYPGAYRKVSVELKIHHLSV 1498
            L R+ H+LW+S    PDLGG   +D     E        +   G Y  V VEL I +L+V
Sbjct: 1711 LQRHNHLLWLSPTSRPDLGGKEADDNRLIMEFEDQATVEINSSGCYSTVCVELDIQNLAV 1770

Query: 1499 NALLKSNQVNEMEGGGLFG--FD-------QDMNSGPYNN-ELCGFDETTSSAPAFRVVK 1548
            N +L+S+ VN+MEG    G  FD       +DM +G         +DET   +  FR++K
Sbjct: 1771 NTILQSHHVNDMEGADSMGVSFDVIQQASLEDMITGNQAAITPASYDETALCSSTFRILK 1830

Query: 1549 QLIQRCLTDAVTSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEF 1608
             ++   + +     N++AD  + H YRWL SP S LHDP LHR LH +M+K+F  L+AEF
Sbjct: 1831 SMVVGWVREITQYRNIYADNQVVHFYRWLRSPSSLLHDPALHRTLHNMMKKLFLQLIAEF 1890

Query: 1609 RKLGATIIFANFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLF 1668
            ++LG+++++ANF+++I+ T K  +  A AY D +  ++ ++E+F  + +     W  LL+
Sbjct: 1891 KRLGSSVVYANFNRIILCTKKRRIDDAIAYVDYITNSIHSKEIFHSLTISFSRCWEFLLW 1950

Query: 1669 MDQYNYGGIPARADESLD----DDSQVDIV------------------------------ 1694
            MD  NYGGI      S+     D  +V  V                              
Sbjct: 1951 MDPCNYGGIKGNVPSSIHCGQPDSQKVGRVEGEEEEEEEEPEEEEPEEEGAQEPDVEDLL 2010

Query: 1695 -SSWNIAEYLPK--EIQDHFVLVVSEFMYIPW----KHAQKLAASRASLQEGSSCTPSIT 1747
             ++WNI ++LP+    Q +F+++VS ++   +    +  ++ A     ++       S  
Sbjct: 2011 ENNWNILQFLPQAASCQSYFLMIVSAYIVAVYHSMKEELRRSAPGSTPVRRRGPSQLSQE 2070

Query: 1748 VAAAENFESHIVQYVKGEISSYFTGKLLSIVRDAIHHMKKMNNDQHNSPGVMQTAANIHK 1807
               A      ++ + +  +++  T    +I +     +    N    S        +   
Sbjct: 2071 AQGAAGALPGMITFSQDYVANELTQNFFTITQKIQKKVTGSRNSTELSEMFPVLPGSHLL 2130

Query: 1808 VDAP-LEFIKHVCAAFALDQNVQHDVLVMRKNLLKYVRVREFAPEAEFRDPCPSFILPNV 1866
            ++ P LEFIK+VC   +LD N+ + V  + ++LL+ V V EF+ EA+F+DPC S++LP V
Sbjct: 2131 LNNPALEFIKYVCKVLSLDTNITNQVNKLNRDLLRLVDVGEFSEEAQFQDPCRSYVLPEV 2190

Query: 1867 ICSYCNDCRDLDLCR------DMALLAQDWHCAMPQCGQPYDREVMENALLQIVRQRERL 1920
            IC  CN CRDLDLC+      D A+L Q W C+   C   YD  V+E AL++ ++++   
Sbjct: 2191 ICHSCNFCRDLDLCKDPSFSQDGAVLPQ-WLCS--NCQIAYDSSVIEMALVEALQKKLMA 2247

Query: 1921 YHLQDLVCIRCNQVKAAHLAEQCACAGSFRCKEDASDFRSKMQIFLNIANRQGFQLLQEC 1980
            + LQDL+C++C  VK  ++   C CAG F        F  ++ IF NIA   G   L E 
Sbjct: 2248 FTLQDLICLKCRGVKETNMPVYCDCAGGFTLTIHTKVFMEQIGIFRNIAQHYGMSYLMES 2307

Query: 1981 TSWILE 1986
              W+L+
Sbjct: 2308 LEWLLQ 2313


>gi|73994933|ref|XP_543348.2| PREDICTED: DNA polymerase epsilon catalytic subunit A [Canis lupus
            familiaris]
          Length = 2273

 Score = 1427 bits (3695), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 723/1411 (51%), Positives = 973/1411 (68%), Gaps = 50/1411 (3%)

Query: 25   EELEAKLGYDLFSEGDKRLGWLLTFASSSLEDEDTRKVYSCIDLYFVSQDGSTFKSKYKF 84
            ++++ + G++   E  ++ GWL+    + + DED R V S +D YF+  DGS FK    +
Sbjct: 35   DKMDLRFGFERLKESGEKTGWLINMHPTEILDEDKRLV-SAVDYYFIQDDGSRFKVALPY 93

Query: 85   RPYFYAATKEKMEMDVEAYLRRRYESQIADIEILEKEDLDLKNHLSGLHKSYLKISFDTV 144
             PYFY A ++  E +V ++L ++++ +IA IE + KEDLDL NHL GL ++Y+K+SF TV
Sbjct: 94   EPYFYIAARKGCEREVSSFLSKKFQGRIAKIETVPKEDLDLPNHLVGLKRNYIKLSFHTV 153

Query: 145  QQLMDVKKDLLHVVERNQAKFDAAEAYESILTG------------KREQRPQDFLDCIVD 192
            + L+ V+KD+   V++N+ +  A +AY ++L+             +  ++  D LD IVD
Sbjct: 154  EDLVRVRKDVSPAVKKNREQGHAGDAYTAMLSSVLQGGSVVIDEEEASKKVTDQLDNIVD 213

Query: 193  LREYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLLE--KRVDLLQRAEVHVCAFDIETTK 250
            +REYDVPYHIR +ID  +    WY++    +   +E  +R DL++R +  V AFDIETTK
Sbjct: 214  MREYDVPYHIRLSIDLKIHVAHWYNIRYRGSAFPVEITRRDDLVERPDPVVLAFDIETTK 273

Query: 251  LPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNVNNE 310
            LPLKFPDA+ D IMMISYM+DGQGYLI NRE V ED+ED E+TPKPE+EG F V N  +E
Sbjct: 274  LPLKFPDAETDQIMMISYMIDGQGYLITNREIVSEDVEDFEFTPKPEYEGPFCVFNEPDE 333

Query: 311  IELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDKNQGECRA 370
            + L++ WF ++QE+KP I VTYNGD+FDWPF+E RAA HG  M +E+GFQ D +QGE +A
Sbjct: 334  VHLIQRWFDYVQEMKPTIMVTYNGDFFDWPFVEARAAVHGLSMYQEIGFQKD-SQGEYKA 392

Query: 371  KFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQMMASYS 430
                H+DC  WVKRDSYLP GS  LKA  KAKLGYDP+E++PEDM R A E+PQ +A+YS
Sbjct: 393  SQCIHMDCLRWVKRDSYLPVGSHNLKAAAKAKLGYDPVELDPEDMCRMATEQPQTLATYS 452

Query: 431  VSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVICPNK 490
            VSDAVATYYLYM YVHPFIF+L TIIPM PDEVLRKGSGTLCE LLMVQA+ AN+I PNK
Sbjct: 453  VSDAVATYYLYMKYVHPFIFALCTIIPMEPDEVLRKGSGTLCEALLMVQAFHANIIFPNK 512

Query: 491  HQSDPEKFYRN-HLLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQLLNNLDRDLQ 549
             + +  K   + H+L++ETY+GGHVE LESGVFRSD+P  F+++P+A++ LL  +++ ++
Sbjct: 513  QEQEFNKLTGDGHVLDAETYVGGHVEALESGVFRSDIPCRFRMNPAAFDFLLQRVEKTMR 572

Query: 550  YAIKVEGKMDLESVSNYDEVKNAIMEKLLRLQEEPIREECPLIYHLDVAAMYPNIILTNR 609
            +AI+ E K+ +E V+N+ EV + I  KL  L++ P R ECPLIYHLDV AMYPNIILTNR
Sbjct: 573  HAIEEEEKVPMEHVTNFQEVCDQIKTKLTSLKDVPNRIECPLIYHLDVGAMYPNIILTNR 632

Query: 610  LQPPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYYHLKKQIESE-FVDGT 668
            LQP ++V +  C ACDFN+PG  C RK+ W WRGE     RS+Y+ ++ Q+ESE F   T
Sbjct: 633  LQPSAVVDEATCAACDFNKPGANCQRKMAWQWRGEFMPASRSEYHRIQHQLESEKFPPLT 692

Query: 669  NGHLSKSFLDLPKMEQQSRLKDRLKKYCQKAYKRVLDKPVTELREAGICMRENSFYVDTV 728
                +++F +L + EQ    K RL  YC+KAYK++    V E R   IC RENSFYVDTV
Sbjct: 693  AEGPARAFHELSREEQAKYEKRRLSDYCRKAYKKIHVTRVEE-RLTTICQRENSFYVDTV 751

Query: 729  RSFRDRRYEYKGLNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHKCILNSFYGY 788
            R+FRDRRYE+KGL+KVWK KLS A   G++ +++  ++M VLYDSLQLAHKCILNSFYGY
Sbjct: 752  RAFRDRRYEFKGLHKVWKKKLSAAMEVGDAAEVKRCKNMEVLYDSLQLAHKCILNSFYGY 811

Query: 789  VMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLPGSFPENFTF 848
            VMR+GARWYSMEMAG+V +TGA II  AR LIE+IG+PLELDTDGIWCVLP SFPENF  
Sbjct: 812  VMRRGARWYSMEMAGIVCFTGANIITQARELIEQIGRPLELDTDGIWCVLPNSFPENFVI 871

Query: 849  KTKDLKK-KLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEFEVDGPYK 907
            KT  +KK K+TISYP  MLN+ V    TNDQYQ L +P S TY T SE SI FEVDGPY 
Sbjct: 872  KTTSVKKPKVTISYPGAMLNIMVKEGFTNDQYQELTEPSSLTYVTRSENSIFFEVDGPYL 931

Query: 908  AMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFLHGST 967
            AMILPASKEEG  +KKRYAVFN+DG+LAELKGFEIKRRGEL+LIK+FQ+ +F+ FL GST
Sbjct: 932  AMILPASKEEGKKLKKRYAVFNEDGSLAELKGFEIKRRGELQLIKIFQSSVFEAFLKGST 991

Query: 968  IEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLADYGEQKSCAVTTAR 1027
            +EE Y +VA VA+ WLD+L ++  ++ DSEL + ISE+ +MS+ L DYGEQKS +++TA+
Sbjct: 992  LEEVYGSVAKVADYWLDVLYSKAANMPDSELFELISENRSMSRKLEDYGEQKSTSISTAK 1051

Query: 1028 RLSDFLGDTMVKDKGLRCQYIVACEPQGTPVSERAVPVAIFETDAEIMKFYLRKWCKTSS 1087
            RL++FLGD MVKD GL C+YI++ +P+G+PV+ERA+P+AIF+ +  + K +LRKW K+SS
Sbjct: 1052 RLAEFLGDQMVKDAGLSCRYIISRKPEGSPVTERAIPLAIFQAEPMVRKHFLRKWLKSSS 1111

Query: 1088 --DVGIRSIVDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLYKKVREKEDKF 1145
              D  IR+I+DW YY +RL SAIQKIITIPAA+Q+V NPVPRV HPDWL+KK+ EK D  
Sbjct: 1112 LQDFDIRTILDWEYYIERLGSAIQKIITIPAALQQVKNPVPRVKHPDWLHKKLLEKNDVC 1171

Query: 1146 RQRKLVDIFSSLKKDDFLNKTCNAETNLMDENVEDLEDFPKKRRNSVNGPRPIVRCFEVN 1205
            +Q+K+ ++F    +           T  +     D+EDF           +P+     + 
Sbjct: 1172 KQKKISELFVLEGRRQVGMAQVPEGTQSL--GAPDMEDF--------GLMKPLHLAVPIA 1221

Query: 1206 NEQKTVKTTDQVDS--LRQQLEPSEVSDQQPSSQNAIDTENIDRIVDYKGWLELKKRKWK 1263
             ++K V    Q +S  L   +   E+  Q P    A+ T   + +V    WL   K+KW+
Sbjct: 1222 TKRKRVLWESQEESHDLELTVPWQEILGQPP----ALGTTQEEWLV----WLRFHKKKWQ 1273

Query: 1264 DNLDRRKKQKLGSLRASHQANGVSESLGDMINHKEAQRRTGVGSYFRRQETAMTRCHWQI 1323
              L  R++      R    A G  E L   I  + A   TG+G + RR   ++    WQI
Sbjct: 1274 --LQARQRLACKKRRCVEVAEG--EPLPGAIRERPA---TGLGGFLRRTARSILDLPWQI 1326

Query: 1324 IQLVPSSQSGVFLAWVVVEGIMVRIPITVPRLFYLNSKDPIVEKFPG-RRVNKTLPHGRR 1382
            +Q+  +SQ+G+F  W V+   +  I + +PR+FY+N +    E+ P  R+V++ LP    
Sbjct: 1327 VQISETSQAGLFRLWAVISSDLYCIRLNIPRVFYVNQQVAKAEEGPSYRKVSRVLPRSNM 1386

Query: 1383 SFNLIEVMIDEDQFRKESKKLAALLADPEVE 1413
             +NL E  + ED +++   ++   L+ P++E
Sbjct: 1387 VYNLYEYSVPEDMYQEHINEINTELSAPDIE 1417



 Score =  323 bits (828), Expect = 7e-85,   Method: Compositional matrix adjust.
 Identities = 193/605 (31%), Positives = 317/605 (52%), Gaps = 68/605 (11%)

Query: 1442 LARYAHILWISDDGVPDLGGTSEEDECFA---DEVHQPVLTYPGAYRKVSVELKIHHLSV 1498
            L R++H+LW+S    PDLGG   +D       D+     +  PG Y  V VEL I +L+V
Sbjct: 1670 LQRHSHLLWLSPTSRPDLGGKEADDNRLVMEFDDQASVEINCPGCYSTVCVELDIQNLAV 1729

Query: 1499 NALLKSNQVNEMEGGGLFG--FD-------QDMNSG-PYNNELCGFDETTSSAPAFRVVK 1548
            N +L+S+ +N+MEG    G  FD       +DM +G    +    +DET   +  FR++K
Sbjct: 1730 NTILQSHHINDMEGADSMGISFDVIQQASLEDMITGNQAASTPASYDETALCSSTFRILK 1789

Query: 1549 QLIQRCLTDAVTSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEF 1608
             ++   + +     N++AD  + H YRWL SP S LHDPVLHR LH +M+K+F  L+AEF
Sbjct: 1790 SMVVGWVKEITQYRNIYADNQVMHFYRWLRSPSSLLHDPVLHRTLHNMMKKLFLQLIAEF 1849

Query: 1609 RKLGATIIFANFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLF 1668
            ++LG+++++ANF+++I+ T K  +  A AY + +  ++ ++E+F  + +     W  LL+
Sbjct: 1850 KRLGSSVVYANFNRIILCTKKRRIEDAIAYMEYITSSIHSKEIFHSLTISFSRCWEFLLW 1909

Query: 1669 MDQYNYGGIPARADESL---DDDSQVD---------------------------IVSSWN 1698
            MD  NYGGI   A  S+     DSQ                             + ++WN
Sbjct: 1910 MDPSNYGGIKGNAPSSIHYGQQDSQKGGRVEEEEEEEEEEEEEEGKQEPDVEDMLENNWN 1969

Query: 1699 IAEYLPK--EIQDHFVLVVSEFM---YIPWKHAQKLAASRASLQEGSSCTPSITVAAAEN 1753
            I ++LP+    Q +F+++VS ++   Y   K   + +A   +       +     AAA +
Sbjct: 1970 IVQFLPQAASCQSYFLMIVSAYIVAVYHSMKEELRRSAPGGTPLRWRGPSQLSQDAAASS 2029

Query: 1754 FESHIVQYVKGEISSYFTGKLLSIVRDAIHHMKKMNNDQHNS------PGVMQTAANIHK 1807
                ++ + +  +++  T    +I +      KK+   + ++      P +    +++  
Sbjct: 2030 ALPGMITFSQDYVANELTQNFFTITQKI---QKKVTGSRSSTELSSMFPAL--PGSHLLL 2084

Query: 1808 VDAPLEFIKHVCAAFALDQNVQHDVLVMRKNLLKYVRVREFAPEAEFRDPCPSFILPNVI 1867
             +  LEFIK+VC   +LD N+ + V  + ++LL+ V V EF+ EA+FRDPC S++LP VI
Sbjct: 2085 KNPALEFIKYVCKVLSLDTNITNQVNKLNRDLLRLVDVGEFSEEAQFRDPCRSYVLPEVI 2144

Query: 1868 CSYCNDCRDLDLCRDMALLAQD------WHCAMPQCGQPYDREVMENALLQIVRQRERLY 1921
            C  CN CRDLDLC++ A  +QD      W C+   C   YD  V+E AL++ ++++   +
Sbjct: 2145 CRSCNFCRDLDLCKEFA-FSQDGAVLPQWLCS--NCQVAYDTSVIEMALVEALQKKLMAF 2201

Query: 1922 HLQDLVCIRCNQVKAAHLAEQCACAGSFRCKEDASDFRSKMQIFLNIANRQGFQLLQECT 1981
             LQDL+C++C  VK  ++   C+CAG F        F  ++ IF NIA   G   L E  
Sbjct: 2202 TLQDLICLKCRGVKETNMPVYCSCAGGFTLTIHTKVFMEQIGIFQNIAQHYGMSYLTETL 2261

Query: 1982 SWILE 1986
             W+L+
Sbjct: 2262 EWLLQ 2266


>gi|5669844|gb|AAD46482.1| DNA polymerase epsilon catalytic subunit [Mus musculus]
          Length = 2283

 Score = 1427 bits (3694), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 729/1440 (50%), Positives = 977/1440 (67%), Gaps = 71/1440 (4%)

Query: 8    RQDGRRTKKQKLIR----SAEEELEAKLGYDLFSEGDKRLGWLLTFASSSLEDEDTRKVY 63
            R DG  +    L R       ++++ + G++   E  +R GWL+    + + DED R V 
Sbjct: 21   RDDGPSSSVSALKRLERSQWTDKMDLRFGFERLKEPGERTGWLINMHPTEILDEDKRLV- 79

Query: 64   SCIDLYFVSQDGSTFKSKYKFRPYFYAATKEKMEMDVEAYLRRRYESQIADIEILEKEDL 123
            S +D YF+  DGS FK    + PYFY A ++  + +V ++L ++++ +IA +E + KEDL
Sbjct: 80   SAVDYYFIQDDGSRFKVALPYMPYFYIAARKGCDREVSSFLSKKFQGKIAKLENVPKEDL 139

Query: 124  DLKNHLSGLHKSYLKISFDTVQQLMDVKKDLLHVVERNQAKFDAAEAYESILTG------ 177
            DL NHL GL +SY+K+SF TV+ L+ V+K++   V++N+ +  A++ Y ++L+       
Sbjct: 140  DLPNHLVGLKRSYIKLSFHTVEDLVKVRKEISPAVKKNREQDHASDEYTTMLSSILQGGS 199

Query: 178  ------KREQRPQDFLDCIVDLREYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLLE--K 229
                  +  ++  D LD IVD+REYDVPYHIR +ID  +    WY+V        +E  +
Sbjct: 200  VITDEDETSKKIADQLDNIVDMREYDVPYHIRLSIDLRIHVAHWYNVRFRGNAFPVEITR 259

Query: 230  RVDLLQRAEVHVCAFDIETTKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIED 289
            R DL++R +  V AFDIETTKLPL FPDA+ D IMMISYM+DGQGYLI NRE V EDIED
Sbjct: 260  RDDLVERPDPVVLAFDIETTKLPLTFPDAETDQIMMISYMIDGQGYLITNREIVSEDIED 319

Query: 290  LEYTPKPEFEGYFKVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHH 349
             E+TPKPE+EG F V N  +E+ L++ WF H+QE KP I VTYNGD+FDWPF+E RAA H
Sbjct: 320  FEFTPKPEYEGPFCVFNEPDEVHLIQRWFEHIQETKPTIMVTYNGDFFDWPFVEARAAIH 379

Query: 350  GFKMSEELGFQCDKNQGECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLE 409
            G  M +E+GFQ D +QGE +A    H+DC  WVKRDSYLP GS  LKA  KAKLGYDP+E
Sbjct: 380  GLSMYQEIGFQKD-SQGEYKAPQCIHMDCLRWVKRDSYLPVGSHNLKAAAKAKLGYDPVE 438

Query: 410  VNPEDMVRFAKEKPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSG 469
            ++PEDM R A E+PQ +A+YSVSDAVATYYLYM YVHPFIF+L TIIPM PDEVLRKGSG
Sbjct: 439  LDPEDMCRMATEQPQTLATYSVSDAVATYYLYMKYVHPFIFALCTIIPMEPDEVLRKGSG 498

Query: 470  TLCEMLLMVQAYKANVICPNKHQSDPEKFYRN-HLLESETYIGGHVECLESGVFRSDLPT 528
            TLCE LLMVQA+ AN+I PNK + +  K   + H+L++ETY+GGHVE LESGVFRSD+P 
Sbjct: 499  TLCEALLMVQAFHANIIFPNKQEQEFNKLTDDGHVLDAETYVGGHVEALESGVFRSDIPC 558

Query: 529  SFKLDPSAYEQLLNNLDRDLQYAIKVEGKMDLESVSNYDEVKNAIMEKLLRLQEEPIREE 588
             F+++P+A++ LL  +++ +++AI+ E K+ +E  +N+ EV   I  KL  L++ P R E
Sbjct: 559  RFRMNPAAFDFLLQRVEKTMRHAIEEEEKVPVEQATNFQEVCEQIKTKLTSLKDVPNRIE 618

Query: 589  CPLIYHLDVAAMYPNIILTNRLQPPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEIFMG 648
            CPLIYHLDV AMYPNIILTNRLQP +IV +  C ACDFN+PG +C RK+ W WRGE    
Sbjct: 619  CPLIYHLDVGAMYPNIILTNRLQPSAIVDEATCAACDFNKPGASCQRKMAWQWRGEFMPA 678

Query: 649  KRSDYYHLKKQIESE-----FVDGTNGHLSKSFLDLPKMEQQSRLKDRLKKYCQKAYKRV 703
             RS+Y+ ++ Q+ESE     F +G     +++F +L + EQ    K RL  YC+KAYK++
Sbjct: 679  SRSEYHRIQHQLESEKFPPLFPEGP----ARAFHELSREEQAKYEKRRLADYCRKAYKKI 734

Query: 704  LDKPVTELREAGICMRENSFYVDTVRSFRDRRYEYKGLNKVWKGKLSEAKASGNSIKIQE 763
                V E R   IC RENSFYVDTVR+FRDRRYE+KGL+KVWK KLS A   G++ +++ 
Sbjct: 735  HVTKVEE-RLTTICQRENSFYVDTVRAFRDRRYEFKGLHKVWKKKLSAAVEVGDASEVKR 793

Query: 764  AQDMVVLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKI 823
             ++M +LYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAG+V +TGA II  AR LIE+I
Sbjct: 794  CKNMEILYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGIVCFTGANIITQARELIEQI 853

Query: 824  GKPLELDTDGIWCVLPGSFPENFTFKTKDLKK-KLTISYPCVMLNVDVARNNTNDQYQTL 882
            G+PLELDTDGIWCVLP SFPENF  KT + KK KLTISYP  MLN+ V    TN QYQ L
Sbjct: 854  GRPLELDTDGIWCVLPNSFPENFVIKTTNAKKPKLTISYPGAMLNIMVKEGFTNHQYQEL 913

Query: 883  VDPVSKTYETHSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEI 942
             +P S TY THSE SI FEVDGPY AMILPASKEEG  +KKRYAVFN+DG+LAELKGFE+
Sbjct: 914  TEPSSLTYVTHSENSIFFEVDGPYLAMILPASKEEGKKLKKRYAVFNEDGSLAELKGFEV 973

Query: 943  KRRGELKLIKVFQAELFDKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYI 1002
            KRRGEL+LIK+FQ+ +F+ FL GST+EE Y +VA VA+ WLD+L ++  ++ DSEL + I
Sbjct: 974  KRRGELQLIKIFQSSVFEAFLKGSTLEEVYGSVAKVADYWLDVLYSKAANMPDSELFELI 1033

Query: 1003 SESSTMSKSLADYGEQKSCAVTTARRLSDFLGDTMVKDKGLRCQYIVACEPQGTPVSERA 1062
            SE+ +MS+ L DYGEQKS +++TA+RL++FLGD MVKD GL C+YI++ +P+G+PV+ERA
Sbjct: 1034 SENRSMSRKLEDYGEQKSTSISTAKRLAEFLGDQMVKDAGLSCRYIISRKPEGSPVTERA 1093

Query: 1063 VPVAIFETDAEIMKFYLRKWCKTSS--DVGIRSIVDWSYYKQRLSSAIQKIITIPAAMQK 1120
            +P+AIF+ +  + K +LRKW K+SS  D  IR+I+DW YY +RL SAIQKIITIPAA+Q+
Sbjct: 1094 IPLAIFQAEPTVRKHFLRKWLKSSSLQDFDIRTILDWDYYIERLGSAIQKIITIPAALQQ 1153

Query: 1121 VSNPVPRVVHPDWLYKKVREKEDKFRQRKLVDIFSSLKKDDFLNKTCNAETNLMDENVED 1180
            V NPVPRV HPDWL+KK+ EK D ++Q+K+ ++F    K   +     A  N +     D
Sbjct: 1154 VKNPVPRVKHPDWLHKKLLEKNDIYKQKKISELFVLEGKRQIV--MAQASENSLSLCTPD 1211

Query: 1181 LED--FPKKRRNSVNGPRPIVRCFEVNNEQKTVKTTDQVDSLRQQLEPSEVSDQQPSSQN 1238
            +ED    K   ++V       R +E   E + +  T         +   EV  Q PS   
Sbjct: 1212 MEDIGLTKPHHSTVPVATKRKRVWETQKESQDIALT---------VPWQEVLGQPPS--- 1259

Query: 1239 AIDTENIDRIVDYKGWLELKKRKW----KDNLDRRKKQKLGSLRASHQANGVSESLGDMI 1294
             + T   + +V    WL+  K+KW    +  L  RKKQ+L S     +   + E      
Sbjct: 1260 -LGTTQEEWLV----WLQFHKKKWQLQAQQRLALRKKQRLESAEDMPRLGPIREGPS--- 1311

Query: 1295 NHKEAQRRTGVGSYFRRQETAMTRCHWQIIQLVPSSQSGVFLAWVVVEGIMVRIPITVPR 1354
                    TG+GS+ R+   ++    WQIIQ+  + Q+G+F  W ++   +  I +++PR
Sbjct: 1312 --------TGLGSFLRKTARSIMDLPWQIIQISETRQAGLFRLWAIIGNDLHCIKLSIPR 1363

Query: 1355 LFYLNSKDPIVEKFPG-RRVNKTLPHGRRSFNLIEVMIDEDQFRKESKKLAALLADPEVE 1413
            +FY+N +    E  P  R+VN+ LP     +NL E  + ED +++   ++   L+ P++E
Sbjct: 1364 VFYVNQRVAKAEDGPAYRKVNRALPRSNIVYNLYEYSVPEDMYQEHINEINTELSVPDIE 1423



 Score =  325 bits (833), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 196/609 (32%), Positives = 320/609 (52%), Gaps = 70/609 (11%)

Query: 1442 LARYAHILWISDDGVPDLGGTSEEDECFA---DEVHQPVLTYPGAYRKVSVELKIHHLSV 1498
            L  + H+LW+S    PDLGG   +D       D+     +   G Y  V VEL I +L+V
Sbjct: 1676 LQHHNHLLWLSPTSRPDLGGKEADDNRLVMEFDDRATVEINSSGCYSTVCVELDIQNLAV 1735

Query: 1499 NALLKSNQVNEMEGGGLFG--FD-------QDMNSG-PYNNELCGFDETTSSAPAFRVVK 1548
            N +L+S+ VN+MEG G  G  FD       +DM +G    + L  +DET   +  FR++K
Sbjct: 1736 NTILQSHHVNDMEGAGSMGISFDVIQQASLEDMVTGNQAASALANYDETALCSSTFRILK 1795

Query: 1549 QLIQRCLTDAVTSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEF 1608
             ++   + +     N++AD  + H YRWL SP S LHDP LHR LH +M+K+F  L+AEF
Sbjct: 1796 SMVVGWVKEITQYHNIYADNQVMHFYRWLQSPCSLLHDPALHRTLHNMMKKLFLQLIAEF 1855

Query: 1609 RKLGATIIFANFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLF 1668
            ++LG+++++ANF+++I+ T K  +  A AY + +  ++ ++E+F  + +     W  LL+
Sbjct: 1856 KRLGSSVVYANFNRIILCTKKRRIEDALAYVEYITNSIHSKEIFHSLTISFSRCWEFLLW 1915

Query: 1669 MDQYNYGGIPARADESL------DDDSQV--------------------------DIV-S 1695
            MD  NYGGI  +   S+      + DSQ                           D++ +
Sbjct: 1916 MDPSNYGGIKGKVPSSIHCGQVKEQDSQAREETDEEEEDKEKDEEEEGMGESEVEDLLEN 1975

Query: 1696 SWNIAEYLPK--EIQDHFVLVVSEFMYIPWKHAQK-----LAASRASLQEGSSCTPSITV 1748
            +WNI ++LP+    Q +F+++VS ++   ++  ++        S    ++G+S     + 
Sbjct: 1976 NWNILQFLPQAASCQSYFLMIVSAYIVAVYQSMKEELRHSAPGSTPVKRKGASQFSQESE 2035

Query: 1749 AAAENFESHIV---QYVKGEIS-SYFTGKLLSIVRDAIHHMKKMNNDQHNSPGVMQTAAN 1804
             A  +    I     YV  E++ S+FT  +   ++  +   +         P  +   ++
Sbjct: 2036 GATGSLPGMITFSQDYVANELTQSFFT--ITQKIQKKVTGSRNTTEPSEMFP--ILPGSH 2091

Query: 1805 IHKVDAPLEFIKHVCAAFALDQNVQHDVLVMRKNLLKYVRVREFAPEAEFRDPCPSFILP 1864
            +   +  LEFIK+VC   +LD N+ + V  + ++LL+ V V EF+ EA+FRDPC S++LP
Sbjct: 2092 LLLNNPALEFIKYVCKVLSLDTNITNQVNKLNRDLLRLVDVGEFSEEAQFRDPCHSYVLP 2151

Query: 1865 NVICSYCNDCRDLDLCRDM------ALLAQDWHCAMPQCGQPYDREVMENALLQIVRQRE 1918
             VIC  CN CRDLDLC+D       A+L Q W C+   C  PYD   +E+AL++ ++++ 
Sbjct: 2152 EVICHSCNFCRDLDLCKDSSFSQDGAILPQ-WLCS--NCQAPYDSSAIESALVEALQRKL 2208

Query: 1919 RLYHLQDLVCIRCNQVKAAHLAEQCACAGSFRCKEDASDFRSKMQIFLNIANRQGFQLLQ 1978
              + LQDLVC++C  +K  H+   C+CAG F        F  +++IF NIA       LQ
Sbjct: 2209 MAFTLQDLVCLKCRGMKETHMPVYCSCAGDFTLTIRTEVFMEQIRIFQNIAKYYSMSYLQ 2268

Query: 1979 ECTSWILEV 1987
            E   W+L+ 
Sbjct: 2269 ETIEWLLQT 2277


>gi|354479152|ref|XP_003501777.1| PREDICTED: DNA polymerase epsilon catalytic subunit A [Cricetulus
            griseus]
          Length = 2297

 Score = 1427 bits (3693), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 731/1441 (50%), Positives = 981/1441 (68%), Gaps = 66/1441 (4%)

Query: 3    RRRWDRQDGRRTKKQKLIRSA-EEELEAKLGYDLFSEGDKRLGWLLTFASSSLEDEDTRK 61
            RR  D      +  ++L RS   ++++ + G++   E  +R GWL+    + + DED R 
Sbjct: 42   RRLDDGPSSSISALKRLERSQWTDKMDFRFGFERLKEPGERTGWLINMHPTEILDEDKRL 101

Query: 62   VYSCIDLYFVSQDGSTFKSKYKFRPYFYAATKEKMEMDVEAYLRRRYESQIADIEILEKE 121
            V S +D YF+  DGS FK    + PYFY A ++  + +V ++L ++++ +IA +E + KE
Sbjct: 102  V-SAVDYYFIQDDGSRFKVALPYMPYFYIAARKGCDREVSSFLSKKFQGKIAKLENVPKE 160

Query: 122  DLDLKNHLSGLHKSYLKISFDTVQQLMDVKKDLLHVVERNQAKFDAAEAYESILTG---- 177
            DLDL NHL GL +SY+K+SF TV+ L+ V+K++   V++N+ +  A++ Y ++L+     
Sbjct: 161  DLDLPNHLVGLKRSYIKLSFHTVEDLVKVRKEISPAVKKNREQDHASDEYTTMLSSILQG 220

Query: 178  --------KREQRPQDFLDCIVDLREYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLLE- 228
                    +  ++  D L+ IVD+REYDVPYHIR +ID  +    WY+V        +E 
Sbjct: 221  GSVITDEEETSKKIADQLNNIVDMREYDVPYHIRLSIDLKIHVAHWYNVRFRGNAFPVEI 280

Query: 229  -KRVDLLQRAEVHVCAFDIETTKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDI 287
             +R DL++R +  V AFDIETTKLPLKFPDA+ D IMMISYM+DGQGYLI NRE V EDI
Sbjct: 281  TRRDDLVERPDPVVLAFDIETTKLPLKFPDAETDQIMMISYMIDGQGYLITNREIVSEDI 340

Query: 288  EDLEYTPKPEFEGYFKVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAA 347
            ED E+TPKPE+EG F V N  +E+ L++ WF H+QE KP I VTYNGD+FDWPF+E RAA
Sbjct: 341  EDFEFTPKPEYEGPFCVFNEPDEVHLIQRWFEHIQETKPTIMVTYNGDFFDWPFVEARAA 400

Query: 348  HHGFKMSEELGFQCDKNQGECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDP 407
             HG  M +E+GFQ D +QGE +A    H+DC  WVKRDSYLP GS  LKA  KAKLGYDP
Sbjct: 401  THGLSMYQEIGFQKD-SQGEYKAPQCIHMDCLRWVKRDSYLPVGSHNLKAAAKAKLGYDP 459

Query: 408  LEVNPEDMVRFAKEKPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKG 467
            +E++PEDM R A E+PQ +A+YSVSDAVATYYLYM YVHPFIF+L TIIPM PDEVLRKG
Sbjct: 460  VELDPEDMCRMATEQPQTLATYSVSDAVATYYLYMKYVHPFIFALCTIIPMEPDEVLRKG 519

Query: 468  SGTLCEMLLMVQAYKANVICPNKHQSDPEKFYRN-HLLESETYIGGHVECLESGVFRSDL 526
            SGTLCE LLMVQA+ AN+I PNK + +  K   + H+L++ETY+GGHVE LESGVFRSD+
Sbjct: 520  SGTLCEALLMVQAFHANIIFPNKQEQEFNKLTDDGHVLDAETYVGGHVEALESGVFRSDI 579

Query: 527  PTSFKLDPSAYEQLLNNLDRDLQYAIKVEGKMDLESVSNYDEVKNAIMEKLLRLQEEPIR 586
            P  F+++P+A++ LL  +++ +++AI+ E K+ +E V+N+ EV + I  KL  L++ P R
Sbjct: 580  PCRFRMNPAAFDFLLQRVEKTMRHAIEEEEKVPVEQVTNFQEVCDEIKTKLTSLKDVPNR 639

Query: 587  EECPLIYHLDVAAMYPNIILTNRLQPPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEIF 646
             ECPLIYHLDV AMYPNIILTNRLQP +IV +  C ACDFN+PG  C RK+ W WRGE  
Sbjct: 640  IECPLIYHLDVGAMYPNIILTNRLQPSAIVDEATCAACDFNKPGADCQRKMAWQWRGEFM 699

Query: 647  MGKRSDYYHLKKQIESE-----FVDGTNGHLSKSFLDLPKMEQQSRLKDRLKKYCQKAYK 701
               RS+Y+ ++ Q+ESE     F +G     +++F +L + EQ    K RL  YC+KAYK
Sbjct: 700  PASRSEYHRIQHQLESEKFPPLFPEGP----ARAFHELSREEQAKYEKQRLADYCRKAYK 755

Query: 702  RVLDKPVTELREAGICMRENSFYVDTVRSFRDRRYEYKGLNKVWKGKLSEAKASGNSIKI 761
            ++    V E R   IC RENSFYVDTVR+FRDRRYE+KGL+KVWK KLS A   G++ ++
Sbjct: 756  KIHMTKVEE-RLTTICQRENSFYVDTVRAFRDRRYEFKGLHKVWKKKLSAAVEVGDASEV 814

Query: 762  QEAQDMVVLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIE 821
            +  ++M +LYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAG+V +TGA II  AR LIE
Sbjct: 815  KRCKNMEILYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGIVCFTGANIITQARELIE 874

Query: 822  KIGKPLELDTDGIWCVLPGSFPENFTFKTKDLKK-KLTISYPCVMLNVDVARNNTNDQYQ 880
            +IG+PLELDTDGIWCVLP SFPENF  KT ++KK KLTISYP  MLN+ V    TN QYQ
Sbjct: 875  QIGRPLELDTDGIWCVLPNSFPENFVIKTTNVKKPKLTISYPGAMLNIMVKEGFTNHQYQ 934

Query: 881  TLVDPVSKTYETHSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGF 940
             L +P S TY T SE SI FEVDGPY AMILPASKEEG  +KKRYAVFN+DG+LAELKGF
Sbjct: 935  ELTEPSSLTYVTRSENSIFFEVDGPYLAMILPASKEEGKKLKKRYAVFNEDGSLAELKGF 994

Query: 941  EIKRRGELKLIKVFQAELFDKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELID 1000
            E+KRRGEL+LIK+FQ+ +F+ FL GST+EE Y +VA VA+ WLD+L ++  ++ DSEL +
Sbjct: 995  EVKRRGELQLIKIFQSSVFEAFLKGSTLEEVYGSVAKVADYWLDVLYSKAANMPDSELFE 1054

Query: 1001 YISESSTMSKSLADYGEQKSCAVTTARRLSDFLGDTMVKDKGLRCQYIVACEPQGTPVSE 1060
             ISE+ +MS+ L DYGEQKS +++TA+RL++FLGD MVKD GL C+YI++ +P+G+PV+E
Sbjct: 1055 LISENRSMSRKLEDYGEQKSTSISTAKRLAEFLGDQMVKDAGLSCRYIISRKPEGSPVTE 1114

Query: 1061 RAVPVAIFETDAEIMKFYLRKWCKTSS--DVGIRSIVDWSYYKQRLSSAIQKIITIPAAM 1118
            RA+P+AIF+ +  + K +LRKW K+SS  D  IR+I+DW YY +RL SAIQKIITIPAA+
Sbjct: 1115 RAIPLAIFQAEPTVRKHFLRKWLKSSSLQDFDIRTILDWDYYIERLGSAIQKIITIPAAL 1174

Query: 1119 QKVSNPVPRVVHPDWLYKKVREKEDKFRQRKLVDIFSSLKKDDFLNKTCNAETNLMDENV 1178
            Q+V NPVPRV HPDWL+KK+ EK D ++Q+K+ ++F    K   +     A  + +    
Sbjct: 1175 QQVKNPVPRVKHPDWLHKKLLEKNDIYKQKKISELFVLEGKRQIV--MAQASESSLSVCT 1232

Query: 1179 EDLEDFPKKRRNSVNGPRPIVRCFEVNNEQKTVKTTDQVDSLRQQLE-PSEVSDQQPSSQ 1237
             D+EDF   +      P        V  ++K V  + Q DS    L  P +    QP S 
Sbjct: 1233 PDIEDFGLTKPYHSAAP--------VATKRKRVWES-QEDSQDNALTVPWQEVLGQPPSL 1283

Query: 1238 NAIDTENIDRIVDYKGWLELKKRKW----KDNLDRRKKQKLGSLRASHQANGVSESLGDM 1293
             +   E       +  WL   K+KW    +  L RRKKQ L S     +   + E     
Sbjct: 1284 GSTQEE-------WLVWLRFHKKKWQLQAQQRLARRKKQCLESTEDVPKLGAIREGPA-- 1334

Query: 1294 INHKEAQRRTGVGSYFRRQETAMTRCHWQIIQLVPSSQSGVFLAWVVVEGIMVRIPITVP 1353
                     TG+GS+ RR   ++    WQI+Q+  ++Q+G+F  W +V   +  I +++ 
Sbjct: 1335 ---------TGLGSFLRRTARSILDLPWQIVQISETNQAGLFRLWAIVGSDLHCIKLSIS 1385

Query: 1354 RLFYLNSKDPIVEKFPG-RRVNKTLPHGRRSFNLIEVMIDEDQFRKESKKLAALLADPEV 1412
            R+FY+N +    E+ P  R+VN+ LP     +NL E  + ED +++   ++   L+ P++
Sbjct: 1386 RVFYVNQRVAKAEEGPSYRKVNRALPRSNMVYNLYEYSVPEDMYQEHINEINTELSAPDI 1445

Query: 1413 E 1413
            E
Sbjct: 1446 E 1446



 Score =  328 bits (840), Expect = 3e-86,   Method: Compositional matrix adjust.
 Identities = 193/600 (32%), Positives = 317/600 (52%), Gaps = 61/600 (10%)

Query: 1442 LARYAHILWISDDGVPDLGGTSEEDECFA---DEVHQPVLTYPGAYRKVSVELKIHHLSV 1498
            L R+ H+LW+S    PDLGG   +D       D+     +   G Y  V +EL I +L+V
Sbjct: 1699 LQRHNHLLWLSPTSRPDLGGKEADDNRLVMEFDDRATVEINNSGCYSTVCMELDIQNLAV 1758

Query: 1499 NALLKSNQVNEMEGGGLFG--FD-------QDMNSG-PYNNELCGFDETTSSAPAFRVVK 1548
            N +L+S+ +N+MEG G  G  FD       +DM +G    +    +DET   +  FR++K
Sbjct: 1759 NTILQSHHINDMEGAGSMGISFDVIQQASLEDMVTGNQAASAPASYDETALCSSTFRILK 1818

Query: 1549 QLIQRCLTDAVTSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEF 1608
             ++   + +     N++AD  + H YRWL SP S LHDP LHR LH +M+K+F  L+AEF
Sbjct: 1819 SMVVGWVKEITQYHNIYADNQVMHFYRWLQSPCSLLHDPALHRTLHNMMKKLFLQLIAEF 1878

Query: 1609 RKLGATIIFANFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLF 1668
            ++LG+++++ANF+++I+ T K  +  A  Y + +  ++ ++E+F  + +     W  LL+
Sbjct: 1879 KRLGSSVVYANFNRIILCTKKRRIEDALGYVEYITNSIHSKEIFHSLTISFSRCWEFLLW 1938

Query: 1669 MDQYNYGGIPARADESL---DDDSQVD---------------------IVSSWNIAEYLP 1704
            MD  NYGGI  +   S+     DSQ                       + ++WNI ++LP
Sbjct: 1939 MDPSNYGGIKGKVPSSIHCGQQDSQEREETKDEEDEEEGMEESEVEDLLENNWNILQFLP 1998

Query: 1705 K--EIQDHFVLVVSEFMYIPWKHAQK-----LAASRASLQEGSSCTPSITVAAAENFESH 1757
            +    Q +F+++VS ++   + H+ K      A     ++   +   S     A      
Sbjct: 1999 QAASCQSYFLMIVSAYIVAVY-HSMKNELRHSAPGSTPVKRKGASQFSQEAKGASGALPG 2057

Query: 1758 IVQYVKGEISSYFTGKLLSIVRDAIHHMKKMNNDQHNS-PGVM---QTAANIHKVDAPLE 1813
            +V + +  +++  T    +I +      KK+   + ++ P  M      +++   +  LE
Sbjct: 2058 MVTFSQNYVANELTQSFFTITQKI---QKKVTGSRSSTEPSEMFPVLPGSHLLLNNPALE 2114

Query: 1814 FIKHVCAAFALDQNVQHDVLVMRKNLLKYVRVREFAPEAEFRDPCPSFILPNVICSYCND 1873
            FIK+VC   +LD N+ + V  + ++LL+ V V EF+ EA+FRDPC S++LP VIC  CN 
Sbjct: 2115 FIKYVCKVLSLDTNITNQVNKLNRDLLRLVDVGEFSEEAQFRDPCHSYVLPEVICHSCNF 2174

Query: 1874 CRDLDLCRDM------ALLAQDWHCAMPQCGQPYDREVMENALLQIVRQRERLYHLQDLV 1927
            CRDLDLC+D       A+L Q W C+   C  PY+  V+E+AL++ ++++   + LQDLV
Sbjct: 2175 CRDLDLCKDSSFSQDGAILPQ-WLCS--NCQAPYNSAVIESALVEALQRKLMAFTLQDLV 2231

Query: 1928 CIRCNQVKAAHLAEQCACAGSFRCKEDASDFRSKMQIFLNIANRQGFQLLQECTSWILEV 1987
            C++C  +K  H+   C CAG F       DF  +++IF NIA       LQE  +W+L+ 
Sbjct: 2232 CLKCRGMKETHMPVYCNCAGDFVLTIHTKDFMEQIRIFQNIAKHYNMSYLQETIAWLLQT 2291


>gi|334326895|ref|XP_001377829.2| PREDICTED: DNA polymerase epsilon catalytic subunit A [Monodelphis
            domestica]
          Length = 2284

 Score = 1426 bits (3692), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 723/1434 (50%), Positives = 991/1434 (69%), Gaps = 56/1434 (3%)

Query: 7    DRQDGRRTKKQKLIRSAE-----EELEAKLGYDLFSEGDKRLGWLLTFASSSLEDEDTRK 61
            +R DG  +     ++  E     ++++A+ G++   E D++ GWL+    + + DED R 
Sbjct: 18   ERDDGSSSSSLSALKRLERSQWTDKMDARFGFERLREPDEKTGWLINMHPTEILDEDKRL 77

Query: 62   VYSCIDLYFVSQDGSTFKSKYKFRPYFYAATKEKMEMDVEAYLRRRYESQIADIEILEKE 121
            V S +D YF+  DG+ FK    ++PYFY AT++  E +V ++L ++++ +IA +E + KE
Sbjct: 78   V-SAVDYYFIQDDGNRFKVALPYKPYFYIATRKGCEREVSSFLSKKFQGKIAKLETVPKE 136

Query: 122  DLDLKNHLSGLHKSYLKISFDTVQQLMDVKKDLLHVVERNQAKFDAAEAYESILTGKR-- 179
            DLDL NHL GL ++Y+K+SF+TV  L+ V+K++   V++N+ + + ++ Y ++L+     
Sbjct: 137  DLDLSNHLVGLKRNYIKLSFNTVDDLVKVRKEISPAVKKNRERDNTSDTYTAMLSSALMG 196

Query: 180  ---------EQRPQDFLDCIVDLREYDVPYHIRFAIDNDVRCGQWYDVSI-SSTGPL-LE 228
                      ++  D LD +VD+REYDVPYHIR +ID  +    WY+V    ST P+ + 
Sbjct: 197  VSVTTDEGVSKKIADQLDNVVDMREYDVPYHIRLSIDLKIHVAHWYNVRYRGSTLPIEIT 256

Query: 229  KRVDLLQRAEVHVCAFDIETTKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIE 288
            +R DL++R +  V AFDIETTKLPLKFPDA+ D IMMISYM+DGQGYLI NRE V EDIE
Sbjct: 257  RRDDLVERPDPVVLAFDIETTKLPLKFPDAETDQIMMISYMVDGQGYLITNREIVSEDIE 316

Query: 289  DLEYTPKPEFEGYFKVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAH 348
            D E+TPKPE+EG F V N  +E  L++ WF H+QE KP I VTYNGD+FDWPF+E RAA 
Sbjct: 317  DFEFTPKPEYEGPFCVFNEPDEAHLIQRWFEHVQETKPTIMVTYNGDFFDWPFVEARAAV 376

Query: 349  HGFKMSEELGFQCDKNQGECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPL 408
            HG  M +E+GFQ D +QGE ++    H+DC  WVKRDSYLP GS  LKA  KAKLGYDP+
Sbjct: 377  HGLSMHQEIGFQKD-SQGEYKSSQCIHMDCLRWVKRDSYLPVGSHNLKAAAKAKLGYDPV 435

Query: 409  EVNPEDMVRFAKEKPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGS 468
            E++PEDM R A E+PQ +A+YSVSDAVATYY+YM YVHPFIF+L TIIPM PDEVLRKGS
Sbjct: 436  ELDPEDMCRMATEEPQTLATYSVSDAVATYYMYMKYVHPFIFALCTIIPMEPDEVLRKGS 495

Query: 469  GTLCEMLLMVQAYKANVICPNKHQSDPEKFYRN-HLLESETYIGGHVECLESGVFRSDLP 527
            GTLCE LLMVQA+ AN++ PNK + +  K   + H+L+SETY+GGHVE LESGVFRSD+P
Sbjct: 496  GTLCEALLMVQAFHANIVFPNKQEQEFNKLTEDGHVLDSETYVGGHVEALESGVFRSDIP 555

Query: 528  TSFKLDPSAYEQLLNNLDRDLQYAIKVEGKMDLESVSNYDEVKNAIMEKLLRLQEEPIRE 587
              FK++P+A++ LL  +++ +++AI+ E  + +E V+N+ EV + I  KL  L++ P R 
Sbjct: 556  CRFKMNPAAFDFLLQRVEKTMRHAIEEEENVPIEQVTNFQEVCDEIKNKLTSLKDVPNRI 615

Query: 588  ECPLIYHLDVAAMYPNIILTNRLQPPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEIFM 647
            ECPLIYHLDV AMYPNIILTNRLQP +IV +  C ACDFN+PG  C RK+ W WRGE   
Sbjct: 616  ECPLIYHLDVGAMYPNIILTNRLQPSAIVNEATCAACDFNKPGANCQRKMTWQWRGEFMP 675

Query: 648  GKRSDYYHLKKQIESE-FVDGTNGHLSKSFLDLPKMEQQSRLKDRLKKYCQKAYKRVLDK 706
              RS+Y+ +++Q+ESE F        +++F +L + EQ    K RL  YC+KAYK++   
Sbjct: 676  ASRSEYHRIQQQLESEKFPPLFPDKPARAFHELSREEQAKYEKKRLADYCRKAYKKIHIT 735

Query: 707  PVTELREAGICMRENSFYVDTVRSFRDRRYEYKGLNKVWKGKLSEAKASGNSIKIQEAQD 766
             V E R   IC RENSFYVDTVR+FRDRRYE+KGL+KVWK KLS A   G++ +++  ++
Sbjct: 736  KVEE-RLTTICQRENSFYVDTVRAFRDRRYEFKGLHKVWKKKLSAAMEMGDAAEVKRCKN 794

Query: 767  MVVLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKP 826
            M +LYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAG+V +TGA II  AR LIE+IG+P
Sbjct: 795  MEILYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGIVCFTGANIITQARELIEQIGRP 854

Query: 827  LELDTDGIWCVLPGSFPENFTFKTKDLKK-KLTISYPCVMLNVDVARNNTNDQYQTLVDP 885
            LELDTDGIWCVLP SFPENF  K+ + KK K+TISYP  MLN+ V    TNDQYQ L +P
Sbjct: 855  LELDTDGIWCVLPNSFPENFVIKSTNAKKPKVTISYPGAMLNIMVKEGFTNDQYQELTEP 914

Query: 886  VSKTYETHSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRR 945
             S TY T SE SI FEVDGPY AMILPASKEEG  +KKRYAVFN+DG+LAELKGFE+KRR
Sbjct: 915  TSLTYITRSENSIFFEVDGPYLAMILPASKEEGKKLKKRYAVFNEDGSLAELKGFEVKRR 974

Query: 946  GELKLIKVFQAELFDKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISES 1005
            GEL+LIK+FQ+ +F+ FL G+T+EE Y++VA VA+ WLD+L ++  ++ DSEL + ISE+
Sbjct: 975  GELQLIKIFQSSVFEAFLKGNTLEEVYASVAKVADYWLDVLYSRAANMPDSELFELISEN 1034

Query: 1006 STMSKSLADYGEQKSCAVTTARRLSDFLGDTMVKDKGLRCQYIVACEPQGTPVSERAVPV 1065
             +MS+ L DYGEQKS +++TA+RL++FLGD MVKD GL C++I++ +P+G+PV+ERA+P+
Sbjct: 1035 RSMSRKLEDYGEQKSTSISTAKRLAEFLGDQMVKDAGLSCRFIISRKPEGSPVTERAIPL 1094

Query: 1066 AIFETDAEIMKFYLRKWCKTSS--DVGIRSIVDWSYYKQRLSSAIQKIITIPAAMQKVSN 1123
            AIF+ +  + K +LRKW K+SS  D  IR+I+DW YY +RL SAIQKIITIPAA+Q+V N
Sbjct: 1095 AIFQAEPTVRKHFLRKWLKSSSLQDFDIRTILDWDYYIERLGSAIQKIITIPAALQQVKN 1154

Query: 1124 PVPRVVHPDWLYKKVREKEDKFRQRKLVDIF-SSLKKDDFLNKTCNAETNLMDENVEDLE 1182
            PVPRV HPDWL+KK+ EK D ++Q+K+ ++F    K+   +N+            + D+E
Sbjct: 1155 PVPRVRHPDWLHKKLMEKHDIYKQKKISELFIHEGKRQVTVNQHPEGSQG---HGILDME 1211

Query: 1183 DFPKKRRNSVNGPRPIVRCFEVNNEQKTVKTTDQVDSLRQQLEPS--EVSDQQPSSQNAI 1240
            D  +         +P+     +  ++K +    Q +S   +L  S  E+  Q PS    +
Sbjct: 1212 DLIQT--------KPLQSAIPIATKRKRIPVESQEESQNLELIQSWREILGQPPS----L 1259

Query: 1241 DTENIDRIVDYKGWLELKKRKWKDNLDRRKKQKLGSLRASHQANGVSESLGDMINHKEAQ 1300
             T   + +V    W+   K+KW+  L  R++Q+    R      GV  S   +I    A 
Sbjct: 1260 GTTREEWLV----WITFHKKKWE--LQARQRQERRKRRRVETREGVLSS--GIIRDGPA- 1310

Query: 1301 RRTGVGSYFRRQETAMTRCHWQIIQLVPSSQSGVFLAWVVVEGIMVRIPITVPRLFYLNS 1360
              TG+G + R+   ++    WQI+Q+  ++Q G+F  W V+   +  I + +PR+FY+N 
Sbjct: 1311 --TGLGHFLRKTARSILDLPWQIVQISETNQPGLFRLWAVIGNDLHCIKLNIPRVFYVNQ 1368

Query: 1361 KDPIVEKFPG-RRVNKTLPHGRRSFNLIEVMIDEDQFRKESKKLAALLADPEVE 1413
            + P  E+ P  R+VN+ LP     +NL E  + ED +++   ++ A L+ P++E
Sbjct: 1369 RVPKEEEGPSFRKVNRVLPRSNMVYNLYEYSVPEDMYQEHINEINADLSAPDIE 1422



 Score =  308 bits (789), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 193/614 (31%), Positives = 310/614 (50%), Gaps = 78/614 (12%)

Query: 1442 LARYAHILWISDDGVPDLGGTSEEDECFA---DEVHQPVLTYPGAYRKVSVELKIHHLSV 1498
            L  + H+LW S    PDLGG   +D       D+     +  PG Y  V +EL I +L+V
Sbjct: 1675 LRHHNHLLWFSPTSRPDLGGKEADDNRLVMEFDDQASVEINSPGCYSTVCLELDIQNLAV 1734

Query: 1499 NALLKSNQVNEMEGGGLFG--FD-------QDMNSG-PYNNELCGFDETTSSAPAFRVVK 1548
            N +L+S+ VN+MEG    G  FD       ++M +G    N    +DET   +  FR++K
Sbjct: 1735 NTILQSHHVNDMEGASSMGISFDVIQQASLEEMVTGNQAANIPASYDETALCSNTFRILK 1794

Query: 1549 QLIQRCLTDAVTSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEF 1608
             ++   + +     NV+AD  + H YRWL SP S L+DP LHR L  +M+K+F  L+AEF
Sbjct: 1795 SMVVGWVKEITQYHNVYADNQVMHFYRWLRSPSSLLYDPALHRTLLSMMKKLFLQLVAEF 1854

Query: 1609 RKLGATIIFANFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLF 1668
            ++LG+++I+ANF+++I+ T K  +  A AY D +  ++ ++E+F  + +     W  LL+
Sbjct: 1855 KRLGSSVIYANFNRIILCTKKRHIEDAIAYIDYITNSIHSKEIFHSLTISFSRCWEFLLW 1914

Query: 1669 MDQYNYGGI----PARADESLDDDSQV------------------------------DIV 1694
            MD  NYGGI    P R    + +  +                               D++
Sbjct: 1915 MDPANYGGIKGKVPTRVHYGMQNTQKEQKAEEEQESEEEQEEEEEEEKEIIEESNVEDLL 1974

Query: 1695 -SSWNIAEYLPK--EIQDHFVLVVSEFMYIPWKHAQKLAASRASLQEGSSCTP------S 1745
             ++WNI ++LP+    Q +F++++S ++   + H+ K    R        CTP      S
Sbjct: 1975 DNNWNIVQFLPQAASCQSYFLMIISAYIVAVY-HSMKEELRR----NAPGCTPIKRRGNS 2029

Query: 1746 ITVAAAENFESHI---VQYVKGEISSYFTGKLLSIVRDAIHHMKKMNNDQHNSPGVM--- 1799
                 AE     +   + + +  +++  T    +I +      K M +     P  M   
Sbjct: 2030 QLSQEAEGMAGALPGMITFSQDYVANELTQNFFTITQKI--QKKVMGSRNSTEPSEMFPL 2087

Query: 1800 QTAANIHKVDAPLEFIKHVCAAFALDQNVQHDVLVMRKNLLKYVRVREFAPEAEFRDPCP 1859
               +++   +  LEFIK+VC   +LD N+ + V  + ++LL+ V V EF+ EA+FRDPC 
Sbjct: 2088 LPGSHLLLNNPALEFIKYVCKVLSLDTNITNQVNKLNRDLLRLVDVGEFSEEAQFRDPCR 2147

Query: 1860 SFILPNVICSYCNDCRDLDLCRDMALLAQD------WHCAMPQCGQPYDREVMENALLQI 1913
            S++LP VIC  CN CRDLDLC+D   L+QD      W C+   C   YD   +E AL++ 
Sbjct: 2148 SYVLPEVICRNCNFCRDLDLCKD-PFLSQDASILPQWLCS--NCQAAYDSAHIEMALVEA 2204

Query: 1914 VRQRERLYHLQDLVCIRCNQVKAAHLAEQCACAGSFRCKEDASDFRSKMQIFLNIANRQG 1973
            ++++   + LQDL+C++C  VK A++   C+CAG F        F  ++ IF NIA    
Sbjct: 2205 LQKKLMAFTLQDLICLKCKGVKEANMPVYCSCAGDFSLTIQTKVFVEQIGIFRNIARHYS 2264

Query: 1974 FQLLQECTSWILEV 1987
               L E   W+L++
Sbjct: 2265 MTYLTEMIDWLLQM 2278


>gi|301775617|ref|XP_002923229.1| PREDICTED: DNA polymerase epsilon catalytic subunit A-like
            [Ailuropoda melanoleuca]
          Length = 2307

 Score = 1425 bits (3689), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 726/1438 (50%), Positives = 981/1438 (68%), Gaps = 66/1438 (4%)

Query: 8    RQDGRRTKKQKLIR----SAEEELEAKLGYDLFSEGDKRLGWLLTFASSSLEDEDTRKVY 63
            R DG  +    L R       ++++++ G++   E  ++ GWL+    + + DED R V 
Sbjct: 18   RDDGSSSSVSALKRLERSQWTDKMDSRFGFERLKEPGEKTGWLVNMHPTEILDEDKRLV- 76

Query: 64   SCIDLYFVSQDGSTFKSKYKFRPYFYAATKEKMEMDVEAYLRRRYESQIADIEILEKEDL 123
            S +D YF+  DGS FK    ++PYFY A ++  E +V ++L ++++ +IA IE + KEDL
Sbjct: 77   SAVDYYFIQDDGSRFKVALPYKPYFYIAARKGCEREVSSFLSKKFQGKIAKIETVPKEDL 136

Query: 124  DLKNHLSGLHKSYLKISFDTVQQLMDVKKDLLHVVERNQAKFDAAEAYESILTG------ 177
            DL NHL GL +SY+K+SF+TV+ L+ V+KD+   V++N+ +  A++ Y ++L+       
Sbjct: 137  DLPNHLVGLKRSYIKLSFNTVEDLVRVRKDISPSVKKNREQGHASDTYTAMLSSVLQGGS 196

Query: 178  ------KREQRPQDFLDCIVDLREYDVPYHIRFAIDNDVRCGQWYDVSI-SSTGPL-LEK 229
                  +  ++  D LD +VD+REYDVPYHIR +ID  +    WY+V    S  P+ + +
Sbjct: 197  VVIDEEEASKKVTDQLDNVVDMREYDVPYHIRLSIDLKIHVAHWYNVRYRGSAFPVEISR 256

Query: 230  RVDLLQRAEVHVCAFDIETTKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIED 289
            R DL++R +  V AFDIETTKLPLKFPD + D IMMISYM+DGQGYLI NRE V +D+ED
Sbjct: 257  RDDLVERPDPVVLAFDIETTKLPLKFPDPETDQIMMISYMIDGQGYLITNREIVSDDVED 316

Query: 290  LEYTPKPEFEGYFKVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHH 349
             E+TPKPE++G F V N  +E  L++ WF H+QE KP I VTYNGD+FDWPF+E RAA H
Sbjct: 317  FEFTPKPEYDGPFCVFNEPDEGHLIQRWFEHVQETKPTIMVTYNGDFFDWPFVEARAAIH 376

Query: 350  GFKMSEELGFQCDKNQGECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLE 409
            G  M +E+GFQ D +QGE +A    H+DC  WVKRDSYLP GS  LKA  KAKLGYDP+E
Sbjct: 377  GLSMYQEIGFQKD-SQGEYKASQCIHMDCLRWVKRDSYLPVGSHNLKAAAKAKLGYDPVE 435

Query: 410  VNPEDMVRFAKEKPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSG 469
            ++PEDM R A E+PQ +A+YSVSDAVATYYLYM YVHPFIF+L TIIPM PDEVLRKGSG
Sbjct: 436  LDPEDMCRMATEQPQTLATYSVSDAVATYYLYMKYVHPFIFALCTIIPMEPDEVLRKGSG 495

Query: 470  TLCEMLLMVQAYKANVICPNKHQSDPEKFYRN-HLLESETYIGGHVECLESGVFRSDLPT 528
            TLCE LLMVQA+ AN+I PNK + +  K   + H+L+SETY+GGHVE LESGVFRSD+P 
Sbjct: 496  TLCEALLMVQAFHANIIFPNKQEQEFNKLTDDGHVLDSETYVGGHVEALESGVFRSDIPC 555

Query: 529  SFKLDPSAYEQLLNNLDRDLQYAIKVEGKMDLESVSNYDEVKNAIMEKLLRLQEEPIREE 588
             F+++P+A++ LL  +++ +++AI+ E K+ +E V+N+ EV + I  KL  L++ P R E
Sbjct: 556  RFRMNPAAFDFLLQRVEKTMRHAIEEEEKVPMEQVTNFQEVCDQIKTKLTSLKDVPNRIE 615

Query: 589  CPLIYHLDVAAMYPNIILTNRLQPPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEIFMG 648
            CPLIYHLDV AMYPNIILTNRLQP ++V +  C ACDFN+PG  C RK+ W WRGE    
Sbjct: 616  CPLIYHLDVGAMYPNIILTNRLQPSAVVDEATCAACDFNKPGADCQRKMAWQWRGEFMPA 675

Query: 649  KRSDYYHLKKQIESE-FVDGTNGHLSKSFLDLPKMEQQSRLKDRLKKYCQKAYKRVLDKP 707
             RS+Y+ ++ Q+ESE F   T     ++F +L + EQ    K RL  YC+KAYK++    
Sbjct: 676  SRSEYHRIQHQLESEKFPPLTAEGPPRAFHELSREEQAKYEKRRLSDYCRKAYKKIHVTR 735

Query: 708  VTELREAGICMRENSFYVDTVRSFRDRRYEYKGLNKVWKGKLSEAKASGNSIKIQEAQDM 767
            V E R   +C RENSFYVDTVR+FRDRRYE+KGL+KVWK KLS A   G++ +++  ++M
Sbjct: 736  VEE-RLTTVCQRENSFYVDTVRAFRDRRYEFKGLHKVWKKKLSAAMELGDAAEVKRCKNM 794

Query: 768  VVLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPL 827
             VLYDSLQLAHKCILNSFYGYVMR+GARWYSMEMAG+V +TGA II  AR LIE+IG+PL
Sbjct: 795  EVLYDSLQLAHKCILNSFYGYVMRRGARWYSMEMAGIVCFTGANIITQARELIEQIGRPL 854

Query: 828  ELDTDGIWCVLPGSFPENFTFKTKDLKK-KLTISYPCVMLNVDVARNNTNDQYQTLVDPV 886
            ELDTDGIWCVLP SFPENF  KT  +KK K+TISYP  MLN+ V    TNDQYQ L +P 
Sbjct: 855  ELDTDGIWCVLPNSFPENFVIKTTSVKKPKVTISYPGAMLNIMVKEGFTNDQYQELTEPS 914

Query: 887  SKTYETHSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRG 946
            S TY T SE SI FEVDGPY AMILPASKEEG  +KKRYAVFN+DG+LAELKGFEIKRRG
Sbjct: 915  SLTYVTRSENSIFFEVDGPYLAMILPASKEEGKKLKKRYAVFNEDGSLAELKGFEIKRRG 974

Query: 947  ELKLIKVFQAELFDKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESS 1006
            EL+LIK+FQ+ +F+ FL GST+EE Y +VA VA+ WLD+L ++  ++ DSEL + ISE+ 
Sbjct: 975  ELQLIKIFQSSVFEAFLKGSTLEEVYGSVAKVADYWLDVLYSKAANMPDSELFELISENR 1034

Query: 1007 TMSKSLADYGEQKSCAVTTARRLSDFLGDTMVKDKGLRCQYIVACEPQGTPVSERAVPVA 1066
            +MS+ L DYGEQKS +++TA+RL++FLGD MVKD GL C+YI++ +P+G+PV+ERA+P+A
Sbjct: 1035 SMSRKLEDYGEQKSTSISTAKRLAEFLGDQMVKDAGLSCRYIISRKPEGSPVTERAIPLA 1094

Query: 1067 IFETDAEIMKFYLRKWCKTSS--DVGIRSIVDWSYYKQRLSSAIQKIITIPAAMQKVSNP 1124
            IF+ +  + K +LRKW K+SS  D  IR+I+DW YY +RL SAIQKIITIPAA+Q+V NP
Sbjct: 1095 IFQAEPMVRKHFLRKWLKSSSLQDFDIRTILDWDYYIERLGSAIQKIITIPAALQQVKNP 1154

Query: 1125 VPRVVHPDWLYKKVREKEDKFRQRKLVDIFSSLKKDDFLNKTCNAETNLMDENVEDLEDF 1184
            VPRV HPDWL+KK+ EK D  +Q+K+ ++F    +      T  A          D+EDF
Sbjct: 1155 VPRVKHPDWLHKKLLEKNDVCKQKKISELFVLEGRRQV--GTAQAPEGTQSLGAPDVEDF 1212

Query: 1185 PKKRRNSVNGPRPIVRCFEVNNEQKTVKTTDQVDSLRQQLEPS----EVSDQQPSSQNAI 1240
                       +P+     V  ++K +    Q +S  Q LE +    E+  Q P    A+
Sbjct: 1213 --------GLVKPLHSAVPVATKRKRILWESQEES--QDLELTVPWQEILGQPP----AL 1258

Query: 1241 DTENIDRIVDYKGWLELKKRKW----KDNLDRRKKQKLGSLRASHQANGVSESLGDMINH 1296
             T   + +V    WL   K+KW    +  L R+K++++           V +        
Sbjct: 1259 GTTQEEWLV----WLRFHKKKWQLQARQRLARKKRRRVEVAEGGPPPGTVRD-------- 1306

Query: 1297 KEAQRRTGVGSYFRRQETAMTRCHWQIIQLVPSSQSGVFLAWVVVEGIMVRIPITVPRLF 1356
               +   G+GS+ RR   ++    WQI+Q+  +SQ+G+F  W V+   +  I ++VPR+F
Sbjct: 1307 ---RPAAGLGSFLRRTARSILDLPWQIVQISETSQAGLFRLWAVISSDLHCIKLSVPRVF 1363

Query: 1357 YLNSKDPIVEKFPG-RRVNKTLPHGRRSFNLIEVMIDEDQFRKESKKLAALLADPEVE 1413
            Y+N +    E+ P  R+V++ LP     +NL E  + ED +++   ++   L+ P++E
Sbjct: 1364 YVNQRVAKAEEGPSYRKVSRVLPRSNMVYNLYEYSVPEDMYQEHINEINTELSAPDIE 1421



 Score =  319 bits (818), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 201/635 (31%), Positives = 317/635 (49%), Gaps = 98/635 (15%)

Query: 1442 LARYAHILWISDDGVPDLGGTSEEDECFA---DEVHQPVLTYPGAYRKVSVELKIHHLSV 1498
            L R++H+LW+S    PDLGG   +D       D+     + YPG Y  V VEL I +L+V
Sbjct: 1674 LQRHSHVLWLSPTSRPDLGGKEADDNRLVMEFDDQASVEINYPGCYSTVCVELDIQNLAV 1733

Query: 1499 NALLKSNQVNEMEGGGLFG--FD-------QDMNSG-PYNNELCGFDETTSSAPAFRVVK 1548
            N +L+S+ +N+MEG    G  FD       +DM +G    + L  +DET   +  FR++K
Sbjct: 1734 NTILQSHHINDMEGADSVGISFDVIQQASLEDMITGNQAASTLASYDETALCSSTFRILK 1793

Query: 1549 QLIQRCLTDAVTSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEF 1608
             ++   + +     N++AD+ + H YRWL SP S LHDP LHR LH +M+K+F  L+AEF
Sbjct: 1794 SMVVGWVREITQYRNIYADSQVMHFYRWLRSPSSLLHDPALHRTLHSMMKKLFLQLIAEF 1853

Query: 1609 RKLGATIIFANFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLF 1668
            ++LG+++++ANF+++I+ T K  +  A AY + +  ++ ++E+F  + +     W  LL+
Sbjct: 1854 KRLGSSVVYANFNRIILCTRKRRIEDAIAYVEYVTSSIHSKEIFHSLTISFSRCWEFLLW 1913

Query: 1669 MDQYNYGGI----PAR------------------------------------ADESLDD- 1687
            MD  NYGGI    P+R                                    A ES D+ 
Sbjct: 1914 MDPSNYGGIKGDVPSRIHCGQVRPNRLGELTLDSEMTLGRILQQHTRACCSGACESRDER 1973

Query: 1688 -------------------DSQVDIVSSWNIAEYLPK--EIQDHFVLVVSEF---MYIPW 1723
                               D +  + +SWNI ++LP+    Q  F+++VS +   +Y   
Sbjct: 1974 EDSPKRGGEEEEEEGAQEPDVEDKLENSWNIVQFLPQAASCQSSFLMIVSAYVVAVYHSM 2033

Query: 1724 KHAQKLAASRASLQEGSSCTPSITVAAAENFESHIVQYVKGEISSYFTGKLLSIVRDAIH 1783
            K   + +A  A+       +     A A      ++ + +  +++  T    +I +    
Sbjct: 2034 KEELRRSAPGATPLRRRGPSQLSQDAPAAGALPGMITFSQDYVANELTQTFFTITQKIQK 2093

Query: 1784 HMKKMNNDQHNS------PGVMQTAANIHKVDAPLEFIKHVCAAFALDQNVQHDVLVMRK 1837
             +    N    S      PG   T  N       LEF+K+VC   +LD N+ + V  + +
Sbjct: 2094 KVTGSRNSTELSGMFPLLPGSHLTLNN-----PALEFVKYVCKVLSLDTNITNQVNKLNR 2148

Query: 1838 NLLKYVRVREFAPEAEFRDPCPSFILPNVICSYCNDCRDLDLCR------DMALLAQDWH 1891
            +LL+ V V EF+ EA+FRDPC S++LP VIC  CN CRDLDLC+      D ++L Q W 
Sbjct: 2149 DLLRLVDVGEFSEEAQFRDPCRSYVLPEVICRSCNFCRDLDLCKESSSSQDGSVLPQ-WL 2207

Query: 1892 CAMPQCGQPYDREVMENALLQIVRQRERLYHLQDLVCIRCNQVKAAHLAEQCACAGSFRC 1951
            C+   C   YD  V+E AL++ ++++   + LQDLVC++C  VK A++   C+CAG F  
Sbjct: 2208 CS--NCQVAYDTSVIEMALVEALQKKLMAFTLQDLVCLKCRGVKEANMPVYCSCAGGFAL 2265

Query: 1952 KEDASDFRSKMQIFLNIANRQGFQLLQECTSWILE 1986
                  F  ++ IF NIA   G   L E   W+L+
Sbjct: 2266 TIHTKVFMEQIGIFQNIAQHYGMSYLLETLEWLLQ 2300


>gi|348550722|ref|XP_003461180.1| PREDICTED: DNA polymerase epsilon catalytic subunit A-like [Cavia
            porcellus]
          Length = 2285

 Score = 1424 bits (3687), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 731/1444 (50%), Positives = 981/1444 (67%), Gaps = 78/1444 (5%)

Query: 8    RQDGRRTKKQKLIR----SAEEELEAKLGYDLFSEGDKRLGWLLTFASSSLEDEDTRKVY 63
            R DG  +    L R       ++++ + G++   E  ++ GWL+    + + DED R V 
Sbjct: 21   RDDGPSSSASALRRLERSQWTDKMDMRFGFERLKEPGEKTGWLINMHPTEILDEDKRLV- 79

Query: 64   SCIDLYFVSQDGSTFKSKYKFRPYFYAATKEKMEMDVEAYLRRRYESQIADIEILEKEDL 123
            S +D YF+  DGS FK    F+PYFY AT++  E +V +++ ++++ +IA +E + KEDL
Sbjct: 80   SAVDYYFIQDDGSRFKVALPFKPYFYIATRKGCEREVSSFISKKFQGKIAKVETVPKEDL 139

Query: 124  DLKNHLSGLHKSYLKISFDTVQQLMDVKKDLLHVVERNQAKFDAAEAYESILTG------ 177
            DL NHL GL ++Y+K+SF TV+ L+ V+K++   V++N  +  A++AY S+L+       
Sbjct: 140  DLPNHLVGLKRNYIKLSFHTVEDLVKVRKEISPAVKKNWQQDHASDAYTSMLSSVLQGGS 199

Query: 178  ------KREQRPQDFLDCIVDLREYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLLE--K 229
                  +  ++  D LD IVD+REYDVPYHIR +ID  +    WY V        +E  +
Sbjct: 200  VITDEEETSKKMADQLDNIVDMREYDVPYHIRLSIDLKIHVAHWYSVRYRGNAFPVEITR 259

Query: 230  RVDLLQRAEVHVCAFDIETTKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIED 289
            + DL++R +  V AFDIETTKLPLKFPDA+ D IMMISYM+DGQGYLI NRE V EDIED
Sbjct: 260  QDDLVERPDPVVLAFDIETTKLPLKFPDAETDQIMMISYMIDGQGYLITNREIVSEDIED 319

Query: 290  LEYTPKPEFEGYFKVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHH 349
             E+TPKPE+EG F V N  +E+ L++ WF H+QE KP I VTYNGD+FDWPF+E RAA H
Sbjct: 320  FEFTPKPEYEGPFCVFNEPDEVHLIQRWFEHIQETKPTIMVTYNGDFFDWPFVEARAAAH 379

Query: 350  GFKMSEELGFQCDKNQGECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLE 409
            G  M +E+GFQ D +QGE +A    H+DC  WVKRDSYLP GS  LKA  KAKLGYDP+E
Sbjct: 380  GLNMYQEIGFQKD-SQGEYKAPQCIHMDCLRWVKRDSYLPVGSHNLKAAAKAKLGYDPVE 438

Query: 410  VNPEDMVRFAKEKPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSG 469
            ++PEDM R A E+PQ +A+YSVSDAVATYYLYM YVHPFIF+L TIIPM PDEVLRKGSG
Sbjct: 439  LDPEDMCRMATEQPQTLATYSVSDAVATYYLYMKYVHPFIFALCTIIPMEPDEVLRKGSG 498

Query: 470  TLCEMLLMVQAYKANVICPNKHQSDPEKFYRN-HLLESETYIGGHVECLESGVFRSDLPT 528
            TLCE LLMVQA+ AN+I PNK + +  K   + H+L++ETY+GGHVE LESGVFRSD+P 
Sbjct: 499  TLCEALLMVQAFHANIIFPNKQEQEFNKLTDDGHVLDAETYVGGHVEALESGVFRSDIPC 558

Query: 529  SFKLDPSAYEQLLNNLDRDLQYAIKVEGKMDLESVSNYDEVKNAIMEKLLRLQEEPIREE 588
             F+++P+A++ LL  +++ +++AI+ E K+ +E  +N+ EV   I  KL  L++ P R E
Sbjct: 559  RFRMNPAAFDFLLQRVEKTMRHAIEEEEKVPVEQATNFQEVCEQIKTKLTSLKDVPNRIE 618

Query: 589  CPLIYHLDVAAMYPNIILTNRLQPPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEIFMG 648
            CPLIYHLDV AMYPNIILTNRLQP ++V +  C ACDFNRPG  C RK+ W WRGE    
Sbjct: 619  CPLIYHLDVGAMYPNIILTNRLQPSAMVDEATCAACDFNRPGANCQRKMAWQWRGEFMPA 678

Query: 649  KRSDYYHLKKQIESE-----FVDGTNGHLSKSFLDLPKMEQQSRLKDRLKKYCQKAYKRV 703
             RS+Y+ ++ Q+ESE     F +G     +++F +L + EQ    K RL  YC+KAYK++
Sbjct: 679  SRSEYHRIQHQLESEKFPPLFPEGP----ARAFHELSREEQAKYEKRRLADYCRKAYKKI 734

Query: 704  LDKPVTELREAGICMRENSFYVDTVRSFRDRRYEYKGLNKVWKGKLSEAKASGNSIKIQE 763
                V E R   IC RENSFYVDTVR+FRDRRYE+KGL+KVWK KLS A  +G++ +++ 
Sbjct: 735  HITKVEE-RLTTICQRENSFYVDTVRAFRDRRYEFKGLHKVWKKKLSAAMEAGDAAEVKR 793

Query: 764  AQDMVVLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKI 823
             ++M VLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAG+V +TGA II  AR LIE+I
Sbjct: 794  CRNMEVLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGIVCFTGANIITQARELIEQI 853

Query: 824  GKPLELDTDGIWCVLPGSFPENFTFKTKDLKK-KLTISYPCVMLNVDVARNNTNDQYQTL 882
            G+PLELDTDGIWCVLP SFPENF  KT + KK K+TISYP  MLN+ V    TNDQYQ L
Sbjct: 854  GRPLELDTDGIWCVLPNSFPENFVIKTTNSKKPKVTISYPGAMLNIMVKEGFTNDQYQEL 913

Query: 883  VDPVSKTYETHSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEI 942
             +P S TY T SE SI FEVDGPY AMILPASKEEG  +KKRYAVFN+DG+LAELKGFE+
Sbjct: 914  AEPSSLTYVTRSENSIFFEVDGPYLAMILPASKEEGKKLKKRYAVFNEDGSLAELKGFEV 973

Query: 943  KRRGELKLIKVFQAELFDKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYI 1002
            KRRGEL+LIK+FQ+ +F+ FL GST+EE YS+VA VA+ WLD+L ++  ++ DSEL + I
Sbjct: 974  KRRGELQLIKIFQSSVFEAFLKGSTLEEVYSSVAKVADYWLDVLYSKAANMPDSELFELI 1033

Query: 1003 SESSTMSKSLADYGEQKSCAVTTARRLSDFLGDTMVKDKGLRCQYIVACEPQGTPVSERA 1062
            SE+ +MS+ L DYGEQKS +++TA+RL++FLGD MVKD GL C+YI++ +P+G+PV+ERA
Sbjct: 1034 SENRSMSRKLEDYGEQKSTSISTAKRLAEFLGDQMVKDAGLSCRYIISRKPEGSPVTERA 1093

Query: 1063 VPVAIFETDAEIMKFYLRKWCKTSS--DVGIRSIVDWSYYKQRLSSAIQKIITIPAAMQK 1120
            +P+AIF+ +  + K +LRKW K+S+  D  IR+I+DW YY +RL SAIQKIITIPAA+Q+
Sbjct: 1094 IPLAIFQAEPSVRKHFLRKWLKSSALQDFDIRTILDWDYYIERLGSAIQKIITIPAALQQ 1153

Query: 1121 VSNPVPRVVHPDWLYKKVREKEDKFRQRKLVDIFSSLKKDDFLNKTCNAETNLMDENVED 1180
            V NPVPRV HPDWL+KK+ EK D ++Q+K+ ++F    K   +     A          D
Sbjct: 1154 VKNPVPRVRHPDWLHKKLLEKSDIYKQKKISELFILEGKRQIV--MAQAPGGSPRSGAPD 1211

Query: 1181 LEDFPKKRRNSVNGPRPIVRCFEVNNEQKTVKTTDQVDS--LRQQLEPSEVSDQQPSSQN 1238
            +EDF   +      P        V  ++K V    Q +S  L   +   E+  Q P    
Sbjct: 1212 IEDFGLTKPPQATVP--------VATKRKRVLWESQEESQDLVLTVPWQEILGQPP---- 1259

Query: 1239 AIDTENIDRIVDYKGWLELKKRKW----KDNLDRRKKQKL----GSLRASHQANGVSESL 1290
            A+ T   + +V    WL   K+KW    +  L RRK+Q+L    G+ R S   +G +   
Sbjct: 1260 ALGTTQEEWLV----WLRFHKKKWQLQARQRLARRKRQRLELAEGAPRHSVIRDGPA--- 1312

Query: 1291 GDMINHKEAQRRTGVGSYFRRQETAMTRCHWQIIQLVPSSQSGVFLAWVVVEGIMVRIPI 1350
                         G+GS+ R+   ++    WQI+Q+  +SQ+G+F  W V+   +  I +
Sbjct: 1313 ------------MGLGSFLRKTARSVLDLPWQIVQISETSQTGLFRLWAVICSDLHCIKL 1360

Query: 1351 TVPRLFYLNSKDPIVEKFPG-RRVNKTLPHGRRSFNLIEVMIDEDQFRKESKKLAALLAD 1409
            ++ R+FY+N +    E+    R+VN+ LP     +NL E  + ED +++   ++   L+ 
Sbjct: 1361 SISRVFYVNQRVARAEEGASCRKVNRVLPRSNLVYNLYEYSVPEDMYQEHINEINTELSA 1420

Query: 1410 PEVE 1413
            P++E
Sbjct: 1421 PDIE 1424



 Score =  319 bits (818), Expect = 9e-84,   Method: Compositional matrix adjust.
 Identities = 196/610 (32%), Positives = 314/610 (51%), Gaps = 74/610 (12%)

Query: 1442 LARYAHILWISDDGVPDLGGTSEEDECFA---DEVHQPVLTYPGAYRKVSVELKIHHLSV 1498
            L R+ H+LW+S    PDLGG   +D       D+     +   G Y  V VEL I +L+V
Sbjct: 1677 LQRHNHLLWLSPTARPDLGGKEADDNRLVMEFDDRATVEINSSGCYSTVCVELDIQNLAV 1736

Query: 1499 NALLKSNQVNEMEGGGLFG--FD-------QDMNSGPYNNELCGFDETTSSAPAFRVVKQ 1549
            N +L+S+ +N+MEG    G  FD       +DM +G   +    +DE    +  FR++K 
Sbjct: 1737 NTILQSHHINDMEGASSMGISFDVIQQASLEDMVTGNQASAPASYDEAALCSSTFRILKS 1796

Query: 1550 LIQRCLTDAVTSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEFR 1609
            ++   + + +   N++AD  + H YRWL SP S LHDP LHR LH +M+K+F  L+AEF+
Sbjct: 1797 MVVGWVKEIMQYHNIYADNQVMHFYRWLRSPCSLLHDPALHRTLHNMMKKLFLQLIAEFK 1856

Query: 1610 KLGATIIFANFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLFM 1669
            +LG++II+ANF+++I+ T K  +  A AY + +  ++ +++LF  + +     W  LL+M
Sbjct: 1857 RLGSSIIYANFNRIILCTKKRRIEDAIAYVEYITNSIHSKDLFHSLTITFSRCWEFLLWM 1916

Query: 1670 DQYNYGGIPARADESLD----------------------------------DDSQVDIVS 1695
            D  NYGGI  +   S+                                    D +  + +
Sbjct: 1917 DPSNYGGIKGKVPSSVHCGQDPQKGEGAENEQDDEEDQEELEEEEEQGVEEPDVEDLLEN 1976

Query: 1696 SWNIAEYLPK--EIQDHFVLVVSEFMYIPWKHAQKLAASRASLQEGSSCT----PSITVA 1749
            +WNI ++LP+    Q +F+++VS ++   + H+ K    R++   GS+      PS    
Sbjct: 1977 NWNILQFLPQAASCQSYFLMIVSAYIVAVY-HSMKDELRRSA--PGSTPVKKRGPSQFSQ 2033

Query: 1750 AAENFESH---IVQYVKGEISSYFTGKLLSIVRDAIHHMKKMNNDQHNS-PGVM---QTA 1802
             AE        ++ + +  +++  T    +I +      KK+   +H++ P  M      
Sbjct: 2034 EAEGTAGALPGVITFSQDYVANELTQSFFTITQKI---QKKVTGTRHSTEPSEMFPLLPG 2090

Query: 1803 ANIHKVDAPLEFIKHVCAAFALDQNVQHDVLVMRKNLLKYVRVREFAPEAEFRDPCPSFI 1862
            +++   +  LEFIK+VC   +LD N+ + V  + ++LL+ V V EF+ EA+FRDPC S++
Sbjct: 2091 SHLLLNNPALEFIKYVCKVLSLDTNITNQVNKLNRDLLRLVDVGEFSEEAQFRDPCRSYV 2150

Query: 1863 LPNVICSYCNDCRDLDLCRDM------ALLAQDWHCAMPQCGQPYDREVMENALLQIVRQ 1916
            LP VIC  CN CRDLDLC+D       A+L Q W C+   C   YD   +E AL++ +++
Sbjct: 2151 LPEVICRSCNFCRDLDLCKDSSFSQDGAVLPQ-WLCS--NCQAAYDSAAIEAALVEALQR 2207

Query: 1917 RERLYHLQDLVCIRCNQVKAAHLAEQCACAGSFRCKEDASDFRSKMQIFLNIANRQGFQL 1976
            +   + LQDLVC +C  VK  H+   C CAG F        F  ++ IF NIA   G   
Sbjct: 2208 KLMAFTLQDLVCQKCGGVKETHMPVYCGCAGDFALTIHTQVFMEQIGIFRNIAQHYGMSY 2267

Query: 1977 LQECTSWILE 1986
            L E   W+L+
Sbjct: 2268 LTETLEWLLQ 2277


>gi|410923140|ref|XP_003975040.1| PREDICTED: DNA polymerase epsilon catalytic subunit A-like [Takifugu
            rubripes]
          Length = 2290

 Score = 1424 bits (3686), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 724/1418 (51%), Positives = 981/1418 (69%), Gaps = 63/1418 (4%)

Query: 25   EELEAKLGYDLFSEGDKRLGWLLTFASSSLEDEDTRKVYSCIDLYFVSQDGSTFKSKYKF 84
            ++++A+ G+D   E  ++ GWL+    + + DED R + S +D YF+ +DGS FK    F
Sbjct: 42   DQMDARFGFDRIREPGEKTGWLINMHPTEILDEDKRMI-SAVDYYFIQEDGSRFKVALPF 100

Query: 85   RPYFYAATKEKMEMDVEAYLRRRYESQIADIEILEKEDLDLKNHLSGLHKSYLKISFDTV 144
            +PYFY ATK+  E +V +Y+ ++++ +++ +EI+ KEDLDL NHL GL +SY+K+SF+TV
Sbjct: 101  KPYFYIATKKNCEREVSSYVSKKFQGKVSKLEIVPKEDLDLPNHLVGLKRSYIKLSFNTV 160

Query: 145  QQLMDVKKDLLHVVERNQAKFDAAEAYESILTG-------------KREQRPQDFLDCIV 191
              L+ VK+++   V +N+ +  + +AY S+L+              +  +   D LD IV
Sbjct: 161  DDLVKVKREISPAVRKNREREQSNDAYTSMLSSALSGGNVASADDERMLKSISDQLDNIV 220

Query: 192  DLREYDVPYHIRFAIDNDVRCGQWYDVSISSTG--PLLEKRVDLLQRAEVHVCAFDIETT 249
            D+REYDVPYH+R +ID  +    WY+V   S+   P + +R DL++R +  V AFDIETT
Sbjct: 221  DMREYDVPYHVRLSIDLKIHVAHWYNVRYRSSAYPPEIVRRDDLVERPDPVVLAFDIETT 280

Query: 250  KLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNVNN 309
            KLPLKFPDA+ D IMMISYM+DGQG+LI NRE V E+IED E+TPKPE+EG F V N ++
Sbjct: 281  KLPLKFPDAETDQIMMISYMIDGQGFLITNREIVSENIEDFEFTPKPEYEGPFTVFNEDD 340

Query: 310  EIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDKNQGECR 369
            E  LLR WF H+QE KP I+VTYNGD+FDWPF+ETRAA +G  M  E+GFQ D +QGE +
Sbjct: 341  EAALLRRWFDHVQETKPNIFVTYNGDFFDWPFVETRAALYGLSMHREIGFQKD-SQGEYK 399

Query: 370  AKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQMMASY 429
            +  A H+DC  WVKRDSYLP GS  LKA  KAKLGYDP+E++PE+M R A E+PQ +A+Y
Sbjct: 400  SSQAIHMDCLRWVKRDSYLPVGSHNLKAAAKAKLGYDPVELDPEEMCRMATEEPQTLATY 459

Query: 430  SVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVICPN 489
            SVSDAVATYYLYM YVHPFIF+L TIIPM PDEVLRKGSGTLCE LLMVQA+ AN+I PN
Sbjct: 460  SVSDAVATYYLYMKYVHPFIFALCTIIPMEPDEVLRKGSGTLCEALLMVQAFHANIIFPN 519

Query: 490  KHQSDPEKFYRN-HLLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQLLNNLDRDL 548
            K +    K   + H+L+SETY+GGHVE LESGVFRSD+P  FK++P+A++ LL  +++ +
Sbjct: 520  KQEQVFNKLTNDGHVLDSETYVGGHVEALESGVFRSDIPCRFKMNPAAFDFLLQRVEKTM 579

Query: 549  QYAIKVEGKMDLESVSNYDEVKNAIMEKLLRLQEEPIREECPLIYHLDVAAMYPNIILTN 608
            ++AI+ E K+ L  V+N++EV   I  KL  L+E P R ECPLIYHLDV AMYPNIILTN
Sbjct: 580  RHAIEEEEKIPLHEVTNFNEVCEEIKAKLTSLKEVPNRIECPLIYHLDVGAMYPNIILTN 639

Query: 609  RLQPPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYYHLKKQIESE----- 663
            RLQP ++V +  C ACDFN+PG  C R++ W WRGEI    RS+++ +++Q+ESE     
Sbjct: 640  RLQPSAMVDEATCAACDFNKPGAACQRRMTWQWRGEIMPASRSEFHRIQQQLESEKFPPL 699

Query: 664  FVDGTNGHLSKSFLDLPKMEQQSRLKDRLKKYCQKAYKRVLDKPVTELRE--AGICMREN 721
            F +G      ++F  L + EQ    K RL  YC++AYK++    VT+L E    IC REN
Sbjct: 700  FPNGP----PRAFHTLNREEQAKHEKKRLADYCKRAYKKI---HVTKLEERVTTICQREN 752

Query: 722  SFYVDTVRSFRDRRYEYKGLNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHKCI 781
            SFYVDTVR+FRDRRYE+KGL+KVWK KLS A+ SG++ +++  ++M +LYDSLQLAHKCI
Sbjct: 753  SFYVDTVRAFRDRRYEFKGLHKVWKKKLSGAQESGDAAEVKRCKNMEILYDSLQLAHKCI 812

Query: 782  LNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLPGS 841
            LNSFYGYVMRKGARWYSMEMAG+V +TGA II  AR LIE+IG+PLELDTDGIWCVLP +
Sbjct: 813  LNSFYGYVMRKGARWYSMEMAGIVCFTGANIITQARELIEQIGRPLELDTDGIWCVLPNT 872

Query: 842  FPENFTFKTKDLKK-KLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEF 900
            FPENF  KT + KK K+T+SYP  MLN+ V    TNDQY  LV+P S TY   SE SI F
Sbjct: 873  FPENFVVKTSNEKKPKVTVSYPGAMLNIMVKEGFTNDQYHELVEPASLTYNIKSENSIFF 932

Query: 901  EVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFD 960
            EVDGPY AMILPASKEEG  +KKRYAVFN+DG+LAELKGFE+KRRGEL+LIK+FQ+ +F+
Sbjct: 933  EVDGPYLAMILPASKEEGKKLKKRYAVFNEDGSLAELKGFEVKRRGELQLIKIFQSSVFE 992

Query: 961  KFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLADYGEQKS 1020
             FL G+T+EE Y++VA VA+ WLD+L ++  ++ D+EL + ISE+ +MS+ L DYGEQKS
Sbjct: 993  SFLRGTTLEEVYASVAKVADYWLDVLYSKAANMPDAELFELISENRSMSRKLEDYGEQKS 1052

Query: 1021 CAVTTARRLSDFLGDTMVKDKGLRCQYIVACEPQGTPVSERAVPVAIFETDAEIMKFYLR 1080
             +++TA+RL++FLGD MVKD GL C+Y+++ +P+G+PV+ERA+P+AIF+ +  + K +LR
Sbjct: 1053 TSISTAKRLAEFLGDQMVKDAGLSCRYVISRKPEGSPVTERAIPLAIFQAEPSVKKHFLR 1112

Query: 1081 KWCKTSS--DVGIRSIVDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLYKKV 1138
            KW K  S  D+ IR+I+DWSYY +RL SAIQKIITIPAA+Q+V NPVPRV HPDWL+KK+
Sbjct: 1113 KWLKMPSLHDLDIRTILDWSYYIERLGSAIQKIITIPAALQQVKNPVPRVRHPDWLHKKL 1172

Query: 1139 REKEDKFRQRKLVDIFSSLKKDDFLNKTCNAETNLMDENVEDLEDFPKKRRNSVNGPRPI 1198
             EK D ++Q+K+ ++FSS  K         +   L    + D+EDF           RP+
Sbjct: 1173 LEKNDIYKQKKINELFSSEGKRQV------SIQPLAAGQIVDMEDFGMP-------ARPL 1219

Query: 1199 VRCFEVNNEQKTVKTTD--QVDSLRQQLEPSEVSDQQPSSQNAIDTENIDRIVDYKGWLE 1256
                 ++ ++K     D  QV+S   +L  S      P        E I  +V    WL 
Sbjct: 1220 QPAIPISTKRKRSSQGDDSQVESQDVELTQSWREILGPPPPVGKTREEI--LV----WLR 1273

Query: 1257 LKKRKWKDNLDRRKKQKLGSLRASHQANGVSESLGDMINHKEAQRRTGVGSYFRRQETAM 1316
              K+KW+  L +RK+++         A  V    G +I        TG+GS+ RR   ++
Sbjct: 1274 YHKKKWELQLKQRKERRKRRKLLDGDAQPVG---GGVIRDGPI---TGLGSFLRRTARSI 1327

Query: 1317 TRCHWQIIQLVPSSQSGVFLAWVVVEGIMVRIPITVPRLFYLNSKDPIVEKFPG-RRVNK 1375
                WQI+Q+  +S  G+F  W V+   +  + + +PR+FY+N K    E+    ++VN+
Sbjct: 1328 LDMPWQIVQIAETSHPGLFKLWAVIGNDLHCMKLNIPRVFYVNQKVQKQEEGATYKKVNR 1387

Query: 1376 TLPHGRRSFNLIEVMIDEDQFRKESKKLAALLADPEVE 1413
             LP     + L E  + ED +++   ++ A L+ P++E
Sbjct: 1388 MLPRSNIVYYLYEYCVPEDMYQEHINEINADLSAPDIE 1425



 Score =  305 bits (780), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 186/609 (30%), Positives = 308/609 (50%), Gaps = 74/609 (12%)

Query: 1442 LARYAHILWISDDGVPDLGGTSEEDECF---ADEVHQPVLTYPGAYRKVSVELKIHHLSV 1498
            L ++ H+LW+S    PDLGG   +D      +D+     +   G Y    VEL +  L+V
Sbjct: 1678 LRKHNHLLWLSPTSRPDLGGKEADDSRLVMDSDDKGSVEINAQGCYSTACVELDLQSLAV 1737

Query: 1499 NALLKSNQVNEMEGGGLFG--FD-------QDMNSGPYN-NELCGFDETTSSAPAFRVVK 1548
            N +L+S  VN+MEGG   G  FD       +DM  G    + +  +DET   +  FR++K
Sbjct: 1738 NTILQSQHVNDMEGGASVGVSFDVIQQASLEDMMMGNQGASAVASYDETALCSNTFRILK 1797

Query: 1549 QLIQRCLTDAVTSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEF 1608
             ++   + +     NV+AD  + H YRWL SP S L+DP LHR LH +M+KVF  L++EF
Sbjct: 1798 SMVVGWVREITQFHNVYADNQVMHFYRWLRSPSSLLYDPALHRTLHNMMKKVFLQLISEF 1857

Query: 1609 RKLGATIIFANFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLF 1668
            ++LG+T+++ NF+++I+ T K  +  A  Y + +  ++ ++E+F  + +     W  LL+
Sbjct: 1858 KRLGSTVVYGNFNRIILCTKKRRIDDAIGYVEYITNSIHSKEIFHSLSISFSRCWEFLLW 1917

Query: 1669 MDQYNYGGIPARADESL-----------------------------------DDDSQVDI 1693
            MD  NYGG+  +   S+                                    D+ +  I
Sbjct: 1918 MDPANYGGVKGKLPSSVLYGQEGTKKGQEEGDKEGSDDEEEEEAEEADGDGEIDEVEELI 1977

Query: 1694 VSSWNIAEYLPK--EIQDHFVLVVSEFMYIPWKHAQKLAASRASLQEGSSCTP------- 1744
             S+WNI ++LP+    Q +F++++S ++   + H+ K    R         TP       
Sbjct: 1978 ESNWNIMQFLPQTASCQKYFLMIISAYIAAVY-HSMKEELRR----NAPGATPVKRRGGS 2032

Query: 1745 SITVAAAENFES--HIVQYVKGEISSYFTGKLLSIVRDAIHHMKKMNNDQHNSPGVMQTA 1802
              +  A E+  +   ++ + +  +SS  T  + +I +     +    N    S       
Sbjct: 2033 QASQQAVEDLSALPGMISFSQEYVSSELTQNIFTITQKIQKKVTGTRNVTQPSEMFPVLP 2092

Query: 1803 ANIHKVDAP-LEFIKHVCAAFALDQNVQHDVLVMRKNLLKYVRVREFAPEAEFRDPCPSF 1861
             +   ++ P LEFIK+VC   +LD N+ + +  ++++LL+ V V EF+ EA+F DPC S+
Sbjct: 2093 GSHLSLNNPALEFIKYVCQVLSLDANIINQMNKLKRDLLRLVDVGEFSDEAQFHDPCHSY 2152

Query: 1862 ILPNVICSYCNDCRDLDLCRDMALLAQD------WHCAMPQCGQPYDREVMENALLQIVR 1915
            ILP VIC +CN CRDLDLC+D + +AQD      W C+   C   Y+  V+E AL++ ++
Sbjct: 2153 ILPEVICHHCNFCRDLDLCKDPS-VAQDGSVLPQWFCS--NCQAQYETNVIEMALVEALQ 2209

Query: 1916 QRERLYHLQDLVCIRCNQVKAAHLAEQCACAGSFRCKEDASDFRSKMQIFLNIANRQGFQ 1975
            ++   Y LQDL+C +C  VK A++   C CA  F        F  ++++F NIA+     
Sbjct: 2210 KKLMSYTLQDLMCRKCKGVKEANMPLYCTCARDFDLTFSIKSFSEQIRVFRNIASHYNMS 2269

Query: 1976 LLQECTSWI 1984
             L+E   W+
Sbjct: 2270 FLEETIDWL 2278


>gi|340373489|ref|XP_003385274.1| PREDICTED: DNA polymerase epsilon catalytic subunit A-like
            [Amphimedon queenslandica]
          Length = 2891

 Score = 1424 bits (3686), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 733/1450 (50%), Positives = 987/1450 (68%), Gaps = 76/1450 (5%)

Query: 3    RRRWDRQDGRRTKKQKLIRSAEEELEAKLGYDLFSEGDKRLGWLLTFASSSLEDEDTRKV 62
            ++R +R+DG  ++ Q+ +RS  +E++ K GY+ + E ++++GWL+ F  S + D++ R V
Sbjct: 20   KKREEREDGS-SRYQRALRS--DEMDRKFGYERYLELEEKMGWLINFHPSDVMDDNQRLV 76

Query: 63   YSCIDLYFVSQDGSTFKSKYKFRPYFYAATKEKMEMDVEAYLRRRYESQIADIEILEKED 122
             S +D YFV +DG+ FK    ++PYFY AT++ +E +V  +L R++  ++A I+ +EKED
Sbjct: 77   -SAVDFYFVEEDGNRFKVSLPYQPYFYIATQKGVEREVSLFLSRKFSGRLAGIDTVEKED 135

Query: 123  LDLKNHLSGLHKSYLKISFDTVQQLMDVKKDLLHVVERNQAKFDAAEAYESIL------- 175
            LDL NHL GL   YLK+ F +V  LM  K+D++  V+RN+ +  +   Y+  L       
Sbjct: 136  LDLPNHLVGLKAIYLKLRFHSVDDLMKAKRDIVPAVKRNKTREKSKAVYDPGLFTGGFVS 195

Query: 176  -TGKREQRPQDFLDCIVDLREYDVPYHIRFAIDNDVRCGQWYDVSISSTGP----LLEKR 230
             TG       D ++ I+D+RE+DVPYHIR AIDN +  G WY V      P    +LE  
Sbjct: 196  STGGASHTVTDQMENIIDIREHDVPYHIRVAIDNRINVGHWYYVKGCGLDPPEIRMLEDE 255

Query: 231  VDLLQRAEVHVCAFDIETTKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDL 290
             D   R +  + AFDIETTKLPLKFPDA  D+IMMISYM+DGQGYL+ NRE VG D+ED 
Sbjct: 256  PD---RPDPVIMAFDIETTKLPLKFPDASSDVIMMISYMIDGQGYLLTNREIVGGDVEDF 312

Query: 291  EYTPKPEFEGYFKVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHG 350
            EYTPKPE+EG F+V N  NE+ LLR +F H+ +VKP I VTYNGD FDWPF+E RA  + 
Sbjct: 313  EYTPKPEYEGPFRVYNEPNEVSLLRKFFDHITQVKPNIIVTYNGDSFDWPFVEARAEFYH 372

Query: 351  FKMSEELGFQCDKNQGECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEV 410
              M +E+GF  D +  E +++   H+D F WVKRDSYLP GSQ LKA TKAKL YDP+E+
Sbjct: 373  ISMYDEIGFAPD-SLNEYKSRPCIHMDAFRWVKRDSYLPVGSQNLKATTKAKLRYDPIEL 431

Query: 411  NPEDMVRFAKEKPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGT 470
            +PEDM R A E+PQ++ASYSVSDAVATYYLY+ YVHPFIF+L TIIPM PDEVLRKGSGT
Sbjct: 432  DPEDMCRMASEQPQVLASYSVSDAVATYYLYLKYVHPFIFALCTIIPMEPDEVLRKGSGT 491

Query: 471  LCEMLLMVQAYKANVICPNKHQSDPEKFYRN-HLLESETYIGGHVECLESGVFRSDLPTS 529
            LCE LLMVQAY  N+I PNK +S   K   + HLL+SETY+GGHVE LESGVFRSD+P+ 
Sbjct: 492  LCEALLMVQAYHGNIIFPNKQESTLNKLTDDGHLLDSETYVGGHVEALESGVFRSDIPSR 551

Query: 530  FKLDPSAYEQLLNNLDRDLQYAIKVEGKMDLESVSNYDEVKNAIMEKLLRLQEEPIREEC 589
            FKL P   + L +N++R +++A++VE K+ LE V++++EV + I+ KL+ L+E P R E 
Sbjct: 552  FKLSPDMLQCLADNVNRTMKHALEVEEKVPLEEVTDFNEVCSEIVSKLINLKETPQRLEH 611

Query: 590  PLIYHLDVAAMYPNIILTNRLQPPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEIFMGK 649
            PLIYHLDV AMYPNIILTNRLQPP+IV + +C +CDFN+PG TC R ++W WRG+     
Sbjct: 612  PLIYHLDVGAMYPNIILTNRLQPPAIVDEVMCASCDFNKPGCTCQRHMDWKWRGDFLPAS 671

Query: 650  RSDYYHLKKQIESEFVDG-TNGHLSKSFLDLPKMEQQSRLKDRLKKYCQKAYKRVLDKPV 708
            R++Y  +K Q+ESE + G   G   +S+  LP +EQ S  K RL  YC+KAYKRV    V
Sbjct: 672  RNEYQSIKLQLESETLPGLAPGDPPRSYHQLPPIEQASIEKKRLADYCRKAYKRVR---V 728

Query: 709  T--ELREAGICMRENSFYVDTVRSFRDRRYEYKGLNKVWKGKLSEAKASGNSIKIQEAQD 766
            T  ELR   +C +ENSFYVDTVR+FRDRRY++KGL KVWK KL  AK  G+  +I+  ++
Sbjct: 729  TREELRSTTVCQKENSFYVDTVRAFRDRRYKFKGLLKVWKKKLDAAKQEGDPAEIKSCKN 788

Query: 767  MVVLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKP 826
              VLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAG+V YTGA II +AR ++E+IG+P
Sbjct: 789  KEVLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGIVCYTGASIITHAREIVEQIGRP 848

Query: 827  LELDTDGIWCVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPV 886
            LELDTDGIWC+LP SFPENF F T   + K+T+SYP  MLNV V  N TN QY TL+DP 
Sbjct: 849  LELDTDGIWCILPSSFPENFEFHTTGKRPKVTVSYPGAMLNVMVQDNFTNHQYHTLIDPG 908

Query: 887  SKTYETHSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRG 946
               Y   SE SI FEVDGPYKAMILPASKEEG  +KKRYAVFN+DGTLAELKGFE+KRRG
Sbjct: 909  KLEYNQTSENSIFFEVDGPYKAMILPASKEEGKKLKKRYAVFNEDGTLAELKGFEVKRRG 968

Query: 947  ELKLIKVFQAELFDKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESS 1006
            EL+LIK FQ+ +F+ FL+GST++ECY +VA VAN WLD+L ++  ++ DSEL D ISE+ 
Sbjct: 969  ELQLIKNFQSSVFEAFLNGSTLQECYESVATVANFWLDVLYSKAANMPDSELFDLISENR 1028

Query: 1007 TMSKSLADYGEQKSCAVTTARRLSDFLGDTMVKDKGLRCQYIVACEPQGTPVSERAVPVA 1066
            +MS+ L DYG+QKS +++TA+RL++FLGD MVKD GL C++I+AC+P+G+PV+ERA+P+A
Sbjct: 1029 SMSRKLEDYGQQKSTSISTAKRLAEFLGDQMVKDAGLSCRFIIACKPEGSPVTERAIPLA 1088

Query: 1067 IFETDAEIMKFYLRKWCKTSS--DVGIRSIVDWSYYKQRLSSAIQKIITIPAAMQKVSNP 1124
            IF+ +  I + YL KW K S+  D  IR+I+DW YY +RL SAIQKIITIPAAMQ VSNP
Sbjct: 1089 IFQAEPTITRHYLCKWLKCSALDDFDIRAILDWKYYIERLGSAIQKIITIPAAMQGVSNP 1148

Query: 1125 VPRVVHPDWLYKKVREKEDKFRQRKLVDIFSSL----KKDDFLNKTCNAETN------LM 1174
            VPRV HPDWL+K++ EK D  +Q+++ ++F+ L    ++DD  N   + E +       +
Sbjct: 1149 VPRVTHPDWLHKRLLEKTDVCKQQRISEMFTVLPSRQQQDDSENMDTSNEMSGGGTKRRL 1208

Query: 1175 DENVEDLE--DFPKKRRNSVNGPRPIVRCFEVNNEQKTVKTTDQVDSLRQQLEPSEVSDQ 1232
            D++  D+E  ++ K++R       P+V     +     V  +  + S ++ L P      
Sbjct: 1209 DDSTGDIEETNWNKRQRKGGQATLPLVTRHTASPSPSQV--SQNMRSWKEILGP------ 1260

Query: 1233 QPSSQNAIDTENIDRIVDYKGWLELKKRKWKDNLDRRKKQKLGSLRASHQANGVSESLGD 1292
             P S     +E       +  WL+  KRKW+    +RK++    +R +   +G   S  D
Sbjct: 1261 -PPSCGHTRSE-------FLVWLDYHKRKWQIQRGQRKERH---IRRNPSLSGGLTSFFD 1309

Query: 1293 MINHKEAQRRTGVGSYFRRQETAMTRCHWQIIQLVPSSQSGVFLAWVVVEGIMVRIPITV 1352
                      T +  + R++  A+    WQIIQ+  +   G F  WV+V+  + ++ +++
Sbjct: 1310 -----SRSTSTNMSGFLRQKNRALAEQPWQIIQVSETQTPGQFTMWVLVDDDLHQLKLSI 1364

Query: 1353 PRLFYLNSK---------DPIVEKFPGRRVNKTLPHGRRSFNLIEVMIDEDQFRKESKKL 1403
            PR+FY+NS+         D     +  R V+K LP      NL E  + E  F++ + +L
Sbjct: 1365 PRIFYVNSRVSRQLTTSDDDDTSAW--RNVSKILPRATPPINLYEYSVPETIFKEHAGEL 1422

Query: 1404 AALLADPEVE 1413
               L+ P++E
Sbjct: 1423 VTQLSSPDIE 1432



 Score =  320 bits (820), Expect = 5e-84,   Method: Compositional matrix adjust.
 Identities = 201/650 (30%), Positives = 319/650 (49%), Gaps = 92/650 (14%)

Query: 1408 ADPEVEVLGWQQNAAKIGMQRCAASSQWFNERISLARYAHI------------------- 1448
            +D    +L WQ++A+K  + +   +  W + R+  ARYAHI                   
Sbjct: 1625 SDNHYLLLDWQRSASKKMIAQLLNAPTWLHNRLEYARYAHIPVGNFCPDAVVYAADVFYS 1684

Query: 1449 ---------LWISDDGVPDLGGTSEEDECF---ADEVHQPVLTYPGAYRKVSVELKIHHL 1496
                     +W +    PDLGG   +D       D+     L  PG Y    +EL I  L
Sbjct: 1685 RHLARHNHVIWATPTDQPDLGGHESDDYRLMMETDDGRSLELNNPGLYPSTCIELSIEGL 1744

Query: 1497 SVNALLKSNQVNEMEGGGL--FGFD-------QDMNSGPYNNELCGFDETTSSAPAFRVV 1547
            +V A+L+++ +N+ EG       FD       +D+  G     L  +DE    + AF+++
Sbjct: 1745 AVTAVLQASHINDYEGASSTSISFDYAPQASLEDLMDGTAAASLSIYDEAALCSNAFKIL 1804

Query: 1548 KQLIQRCLTDAVTSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAE 1607
            + L+   L +  T    +AD  LQH YRW+ SP+S L++P L R++HK+M K+F  L+ E
Sbjct: 1805 RGLVHTWLHEVSTRQTTYADFQLQHFYRWISSPNSLLYEPALCRMIHKLMSKLFMQLVGE 1864

Query: 1608 FRKLGATIIFANFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLL 1667
            F++LG+ +++A+F+++I+ T K  LS A AY   + K++ +R+LF  + L+P   W  LL
Sbjct: 1865 FKRLGSMVVYADFNRIILSTKKRKLSDASAYIKFVCKSIYSRDLFHSLILQPKGCWKLLL 1924

Query: 1668 FMDQYNYGGIPARADESLDDDSQVDIVS--------------------SWNIAEYLPK-- 1705
            +M++ NYGGI     ESL   S  ++ S                     WNI  YLP+  
Sbjct: 1925 WMNKANYGGIRIPLPESLHSRSLEELRSVDEILVADEVEEEPRYSLDMKWNIVNYLPEIS 1984

Query: 1706 EIQDHFVLVVSEFMYIPWKHAQKLAASRASLQEGSSCTPSITVAAAENFESHIVQYVKGE 1765
             +Q  F + +  ++   ++  Q+L +  ++    SS   S            IV Y +  
Sbjct: 1985 SVQKVFNIALGGYIQGLYEKIQELMSVSSTQPNDSSLVTS------------IVSYSQDL 2032

Query: 1766 ISSYFTGKLLSIVRDAIHHMKKMNNDQH----NSPGVMQTAANIHKVDAPLEFIKHVCAA 1821
            I    + KL S+ +D IH    ++ D        PG     +++   +  LEFIK++C  
Sbjct: 2033 IERQLSEKLFSLAQD-IHRSLGVSLDSSELFPQLPG-----SHLSLTNPALEFIKYMCEI 2086

Query: 1822 FALDQNVQHDVLVMRKNLLKYVRVREFAPEAEFRDPCPSFILPNVICSYCNDCRDLDLCR 1881
             +LD   Q  V  +R++LLK + V+EF+ EA F DPC S++L +VIC +CN CRD+DLCR
Sbjct: 2087 LSLDSTTQQQVNKLRRDLLKLIGVKEFSEEAVFVDPCCSYVLASVICEHCNHCRDIDLCR 2146

Query: 1882 ------DMALLAQDWHCAMPQCGQPYDREVMENALLQIVRQRERLYHLQDLVCIRCNQVK 1935
                  D  L    WHC+   C   YD++V+E  L+ IV  R     +QDL C++C  VK
Sbjct: 2147 DPHTTYDQQLDKSIWHCS--HCNSQYDQDVIELKLIDIVHNRSVGMVIQDLKCVKCQGVK 2204

Query: 1936 AAHLAEQCACAGSFRCKEDASDFRSKMQIFLNIANRQGFQLLQECTSWIL 1985
              ++ + C+CAG F        +  +++ F  IA      LL E  SW+L
Sbjct: 2205 ETNMPDYCSCAGQFTETVSLKQYEEQLRTFKTIAQHFKMSLLDETVSWLL 2254


>gi|302830634|ref|XP_002946883.1| hypothetical protein VOLCADRAFT_116136 [Volvox carteri f.
            nagariensis]
 gi|300267927|gb|EFJ52109.1| hypothetical protein VOLCADRAFT_116136 [Volvox carteri f.
            nagariensis]
          Length = 2541

 Score = 1424 bits (3685), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 710/1230 (57%), Positives = 863/1230 (70%), Gaps = 132/1230 (10%)

Query: 23   AEEELEAKLGYDLFSEGDKRLGWLLTFASSSLEDEDTRKVYSCIDLYFVSQDGSTFKSKY 82
            AE+ L+ +LG+ LF+ GD RLGWL+   SS + D+D+ +V + +D YF+ QDG+ FK++ 
Sbjct: 43   AEDVLDEQLGFPLFTTGDDRLGWLMNIQSSHMSDKDSGRVVASVDCYFMCQDGAMFKARL 102

Query: 83   KFRPYFYAATKEKMEMDVEAYLRRRYESQIADIEILEKEDLDLKNHLSGLHKSYLKISFD 142
             F PYFY   ++  EM+ E YLRR+ E  +  ++++EKEDLDLKNHLSGL +  L++S  
Sbjct: 103  AFPPYFYIGVQDGREMEAENYLRRKCEGAVRSVDVVEKEDLDLKNHLSGLKRRLLRVSTF 162

Query: 143  TVQQLMDVKKDLLHVVERNQAKFDAAEAYE-----------------------------S 173
            TVQQL++V+K++  +V  N  K     AY                              +
Sbjct: 163  TVQQLVEVRKEVAPLVAANAQKAATTSAYSVEGLQGQQGLGGLGLGGGGMGEQDGGAAAA 222

Query: 174  ILTGKREQRPQDFLDCIVDLREYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLLEKRVDL 233
               G    + +D  +  ++LREYDVPYH+RFAID DVR G WY                 
Sbjct: 223  AGGGPAAGKMKDIREAFLELREYDVPYHVRFAIDTDVRVGHWY----------------- 265

Query: 234  LQRAEVHVCAFDIETTKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYT 293
              RAE  +CAFDIETTKLPL+FP+A+YD + MISYMLD QGYLI+NRE VG DI D EYT
Sbjct: 266  -TRAEPRICAFDIETTKLPLQFPNAEYDQVFMISYMLDRQGYLIVNREVVGADISDFEYT 324

Query: 294  PKPEFEGYFKVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKM 353
            PKPEFEG FKVTN  +E  LL  +F HM+ VKP IYVTYNGD+FD+PF+E R        
Sbjct: 325  PKPEFEGPFKVTNAPDERALLVHFFEHMRSVKPAIYVTYNGDFFDFPFIEARK------- 377

Query: 354  SEELGFQCDKNQGECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPE 413
                         EC ++ A H+DC  WV RDSYLPQGS+GLKAVTKAKLGYDP+EV PE
Sbjct: 378  -------------ECLSRHAVHMDCMHWVDRDSYLPQGSRGLKAVTKAKLGYDPVEVAPE 424

Query: 414  DMVRFAKEKPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCE 473
            DMVR A+E PQ MASYSVSDAV+TYYLYMTYVHPFIFSLATIIP+ PDEVLRKGSGTLCE
Sbjct: 425  DMVRLARETPQAMASYSVSDAVSTYYLYMTYVHPFIFSLATIIPLPPDEVLRKGSGTLCE 484

Query: 474  MLLMVQAYKANVICPNKHQSDPEKFYRNHLLESETYIGGHVECLESGVFRSDLPTSFKLD 533
             LLMV+AY+AN+ CPNKH  D E  YR HLLESETYIGG VE LESGVFRSDLP  FK  
Sbjct: 485  QLLMVEAYRANIACPNKHVGDKEALYRGHLLESETYIGGKVEALESGVFRSDLPLKFKCS 544

Query: 534  PSAYEQLLNNLDRDLQYAIKVEGKMDLES--VSNYDEVKNAIMEKLLRLQEEPIREECPL 591
             +AY+ LL+ LD+DL YA+  E K    S    NY++++  I  KL  L++EP R E PL
Sbjct: 545  AAAYQMLLDQLDKDLSYALCHEAKWKGGSDDCINYEKIRADIAAKLEALRDEPNRVENPL 604

Query: 592  IYHLDVAAMYPNIILTNRLQPPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEIFMGKRS 651
            IYHLDVAAMYPNIILTNRLQP +IVT+E C ACDFN P KTCLR++EW WRGE +   RS
Sbjct: 605  IYHLDVAAMYPNIILTNRLQPSAIVTEEDCAACDFNAPNKTCLRQMEWEWRGEHYAASRS 664

Query: 652  DYYHLKKQIESEFVDGTNGHL-----------------SKSFLDLPKMEQQSRLKDRLKK 694
            +Y  +K Q+ +E      G                   S+++ +L   EQ+  L+DRLKK
Sbjct: 665  EYLQIKAQLAAETFPPAAGAAIAAAAANGGGGGGGPPQSRTWGELSLEEQRKMLQDRLKK 724

Query: 695  YCQKAYKRVLDKPVTELREAGICMRENSFYVDTVRSFRDRRYEYKGLNK----------- 743
            YCQK YKRVLDKP+TE R AGIC RENSFY+DTVR+FRDRRYEYKGL K           
Sbjct: 725  YCQKVYKRVLDKPITEKRVAGICQRENSFYIDTVRAFRDRRYEYKGLGKLDSGPMQNYTS 784

Query: 744  ---------------VWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHKCILNSFYGY 788
                           VWKGKL EAKA GN I+IQEA DM VLY+SLQLAHKCILNSFYGY
Sbjct: 785  ATALRQCIDLHGRGEVWKGKLEEAKAGGNPIRIQEAADMCVLYESLQLAHKCILNSFYGY 844

Query: 789  VMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLPGSFPENFTF 848
            VMRKGARWYSMEMAGVVTYTGA+II+ A  L+ ++G+ LELDTDGIWC LPGSFPENF F
Sbjct: 845  VMRKGARWYSMEMAGVVTYTGARIIERANKLVLQLGRTLELDTDGIWCALPGSFPENFKF 904

Query: 849  KTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPV--------SKTYETHSECSIEF 900
            K K+  K+  +SYPC +LN  VA++NTNDQYQTLV P            Y T +E SIEF
Sbjct: 905  KNKN-GKEFKLSYPCCVLNAMVAQHNTNDQYQTLVRPAPGEPPRAGPPRYVTSNEMSIEF 963

Query: 901  EVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFD 960
            EVDGPY+AMILPASKEEG  IKKRYAVFN DGTLAELKGFE+KRRGELKLIKVFQAE+F+
Sbjct: 964  EVDGPYRAMILPASKEEGKSIKKRYAVFNHDGTLAELKGFEVKRRGELKLIKVFQAEVFE 1023

Query: 961  KFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLADYGEQKS 1020
            +FL G T+EECYSAVAAVANRWLDLLD +G D+ D EL+D+ISE++TM+K+LA+Y  +KS
Sbjct: 1024 QFLSGGTLEECYSAVAAVANRWLDLLDTRGADLNDDELLDHISEATTMTKALAEYEGRKS 1083

Query: 1021 CAVTTARRLSDFLGDTMVKDKGLRCQYIVACEPQGTPVSERAVPVAIFETDAEIMKFYLR 1080
            CA++TA RL+ FLGD  +KDKGL C Y++A  P   P SERA+PV+IF  +  + + +LR
Sbjct: 1084 CAISTANRLAAFLGDERIKDKGLNCTYVIAKHPASQPTSERAIPVSIFSAEPAVARAWLR 1143

Query: 1081 KWCKTSSDVG---------IRSIVDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHP 1131
            +WC    DVG         +R IVDW YY++RL SAIQKIITIPAA+Q + NPVPRV HP
Sbjct: 1144 RWC--GGDVGAGAHSVIPDVRDIVDWDYYRERLGSAIQKIITIPAALQGLPNPVPRVKHP 1201

Query: 1132 DWLYKKVREKEDKFRQRKLVDIFSSLKKDD 1161
            DWL+KK+RE+ DK +Q +L D+ + ++K++
Sbjct: 1202 DWLHKKIRERTDKCQQLRLDDLLTRMRKNN 1231



 Score =  284 bits (727), Expect = 3e-73,   Method: Compositional matrix adjust.
 Identities = 195/600 (32%), Positives = 296/600 (49%), Gaps = 72/600 (12%)

Query: 1449 LWISDDGVPDLGGTS------EEDECFADEVHQPV-----LTYPGAYRKVSVELKIHHLS 1497
            L + D  +PDLGG+        ED   A+ V         L+YPG YR V V L++HHL+
Sbjct: 1933 LPVVDPALPDLGGSETAEGDPHEDTGAAEAVSAATRPRSELSYPGVYRSVCVTLRLHHLA 1992

Query: 1498 VNALLKSNQVNEMEGGGLFGFDQDMNSGPYNNELCGFDETTSSAPAFRVVKQLIQRCLTD 1557
            V A+  ++ + E+E            +        G    ++ A  F+V++ L    + D
Sbjct: 1993 VAAVESADLLAELE---GAASGAAAAAAVAGGGGGGGFGGSNGAAGFKVLRALQASWIRD 2049

Query: 1558 AVTSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEFRKLGATIIF 1617
            A  + N+ AD++LQ+ YRWL +P S LHDP LHR L ++  K+F  L +E R+LGA I+ 
Sbjct: 2050 ATVNRNMIADSLLQNSYRWLSNPSSPLHDPGLHRALLQLQHKLFLQLCSEMRRLGAVIVA 2109

Query: 1618 ANFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLFMDQYNYGGI 1677
            AN + + + TGK ++ AA  Y   LL+A++ RELF W+EL P  +  S ++ D YN+ G+
Sbjct: 2110 ANTNSITLCTGKRNVRAAAGYTRFLLEAMRGRELFRWLELVPAAWSLSYMYRDPYNWAGL 2169

Query: 1678 PA-------RADESL---------------DD------------DSQVDIVSSWNIAEYL 1703
             +       RA E+                DD            D +  +   WN+ E L
Sbjct: 2170 ESSVAGTEWRALEAGGGTAAGGPGEVHDGEDDLGGPTAAAAAAADEEPVVKFVWNLKENL 2229

Query: 1704 PKEIQDHFVLVVSEFMYIPWKHAQKLAASRAS----------------LQEGSSCTPSIT 1747
            P  +Q   VL+++EF+Y+PWK A+K A   A+                L +G     +I 
Sbjct: 2230 PAAVQQDLVLLLTEFLYLPWKEARKAARVAAAEVAGGDGGGGSQGGLPLSQGGGTQAAIA 2289

Query: 1748 VAAAENFESHIVQYVKGEISSYFTGKLLSIVRDAIHHMKKMNNDQHNSPGVMQTAANIHK 1807
               AE  +S    ++K  ++  FT +LL+ V  A   +    + + + P +  +  +  +
Sbjct: 2290 ATRAEEVQS---SFLKALVAEVFTDRLLTRV-AAWKVITPGCSPEWSFPQLAGSYLSREE 2345

Query: 1808 VDAP-LEFIKHVCAAFALDQNVQHDVLVMRKNLLKYVRVREFAPEAEFRDPCPSFILPNV 1866
            +  P L F++      ALD  V   V ++R+ LLK + V EF  +AEFR+ C  F LP+V
Sbjct: 2346 LGHPALAFVRVASHLLALDGRVSEQVALLRRQLLKLLHVSEFGADAEFREMCLPFALPDV 2405

Query: 1867 ICSYCNDCRDLDLCRDMALLAQDWHCAMPQCGQPYDREVMENALLQIVRQRERLYHLQDL 1926
            ICS+CNDCRDLDL RD AL   DW C    C QP D   +E  L+  +R     Y  QDL
Sbjct: 2406 ICSFCNDCRDLDLTRDEALAQHDWRCR--SCRQPLDTAALERRLVAALRAEAAAYQTQDL 2463

Query: 1927 VCIRCNQVKAAHLAEQCA-CAGSFRCKEDASDFRSKMQIFLNIANRQGFQLLQECTSWIL 1985
             C++C QV + HL   C  C G             ++ ++ N+A   GF++L E   W+L
Sbjct: 2464 SCVKCKQVTSGHLRALCGLCGGGLTVTRRPEAAARRLVVYRNLARFHGFRVLAEMAGWLL 2523



 Score = 48.5 bits (114), Expect = 0.037,   Method: Compositional matrix adjust.
 Identities = 44/197 (22%), Positives = 74/197 (37%), Gaps = 34/197 (17%)

Query: 1250 DYKGWLELKKRKWK----DNLDRRKKQKLGSLRASHQANGVSESLGDMINHKEAQRRTGV 1305
            DY GW+  +K +W+    +N  R+ +    +  A       + +               +
Sbjct: 1423 DYAGWVAAQKPRWRAVRLENKRRKAEAVKAAEAARRVGAAAAAAAAAAAAGGVGNNALSM 1482

Query: 1306 GSYFRRQETAMTRCHWQIIQLVPSSQSGVFLAWVVVEGIMVRIPITVPRLFYLNS--KDP 1363
             S    Q  A+T   WQ++ L  +S  G    W +  G M  + + VPR F ++S   +P
Sbjct: 1483 RSLLANQAAAVTAVPWQVLHLAETSTPGQLKVWFLAGGKMHWVSLQVPRSFLVDSLLGEP 1542

Query: 1364 I----------------------------VEKFPGRRVNKTLPHGRRSFNLIEVMIDEDQ 1395
            +                            ++    R  + TLP GRR   L  V + E Q
Sbjct: 1543 LELAGSLTAAAAGPAAAPGGGGGGGSLQQLQLEVTRANSVTLPGGRRPAYLYRVTLPEHQ 1602

Query: 1396 FRKESKKLAALLADPEV 1412
            +R  + +LAA L+   V
Sbjct: 1603 YRSSATRLAAALSASHV 1619


>gi|301609551|ref|XP_002934338.1| PREDICTED: DNA polymerase epsilon catalytic subunit A-like [Xenopus
            (Silurana) tropicalis]
          Length = 2206

 Score = 1424 bits (3685), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 721/1369 (52%), Positives = 962/1369 (70%), Gaps = 58/1369 (4%)

Query: 25   EELEAKLGYDLFSEGDKRLGWLLTFASSSLEDEDTRKVYSCIDLYFVSQDGSTFKSKYKF 84
            ++++A+ G++   E  ++ GWLL    + + DED R V S +D YF+ +DGS FK    +
Sbjct: 40   DKIDAQYGFERIREPGEKTGWLLNMHPNEILDEDKRLV-SAVDYYFIQEDGSRFKVALPY 98

Query: 85   RPYFYAATKEKMEMDVEAYLRRRYESQIADIEILEKEDLDLKNHLSGLHKSYLKISFDTV 144
            +PYFY ATK+  E +V ++L ++++ ++A +E + KEDLDL NHL GL + Y+K+SF +V
Sbjct: 99   KPYFYVATKKGCEREVSSFLSKKFQGKLAKLETIPKEDLDLPNHLVGLKRGYIKLSFHSV 158

Query: 145  QQLMDVKKDLLHVVERNQAKFDAAEAYESILT--------GKREQRPQ----DFLDCIVD 192
              L+ V+K++   V +N+ +  A++ Y ++L+        G  E+ P     D ++ IVD
Sbjct: 159  DDLIKVRKEISPAVRKNKERDHASDTYTAMLSSALTGNNMGAEEEGPSKKISDQMENIVD 218

Query: 193  LREYDVPYHIRFAIDNDVRCGQWYDVSI--SSTGPLLEKRVDLLQRAEVHVCAFDIETTK 250
            +REYDVPYH+R +ID  +    WY++    SS+ P + +R DL++R +  V AFDIETTK
Sbjct: 219  MREYDVPYHVRVSIDLKIHVAHWYNIRYRGSSSPPEITRRDDLVERPDPVVLAFDIETTK 278

Query: 251  LPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNVNNE 310
            LPLKFPDA+ D IMMISYM+DGQGYLI NRE V EDIED E+TPKPE+EG F + N  +E
Sbjct: 279  LPLKFPDAETDQIMMISYMIDGQGYLITNREIVSEDIEDFEFTPKPEYEGPFCIFNEPDE 338

Query: 311  IELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDKNQGECRA 370
              L++ WF HMQE KP I VTYNGD+FDWPF+ETRA+ HG  M +E+GFQ D NQGE ++
Sbjct: 339  AHLIQRWFEHMQETKPNIIVTYNGDFFDWPFVETRASVHGMSMLQEIGFQKD-NQGEYKS 397

Query: 371  KFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQMMASYS 430
                H+DC  WVKRDSYLP GS  LKA  KAKLGYDP+E++PE+M R A E+PQ++A+YS
Sbjct: 398  PPCIHMDCLRWVKRDSYLPVGSHNLKAAAKAKLGYDPVELDPEEMCRMATEEPQVLATYS 457

Query: 431  VSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVICPNK 490
            VSDAVATYY+YM YVHPFIF+L TIIPM PDEVLRKGSGTLCE LLMVQAY AN+I PNK
Sbjct: 458  VSDAVATYYMYMKYVHPFIFALCTIIPMEPDEVLRKGSGTLCEALLMVQAYHANIIFPNK 517

Query: 491  HQSDPEKFYRN-HLLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQLLNNLDRDLQ 549
             ++   K   + H+L+SETY+GGHVE LESGVFRSD+P  FK++P+A++ LL  ++  L+
Sbjct: 518  QEAVFNKLTSDGHVLDSETYVGGHVEALESGVFRSDIPCRFKMNPAAFDFLLQRVELTLR 577

Query: 550  YAIKVEGKMDLESVSNYDEVKNAIMEKLLRLQEEPIREECPLIYHLDVAAMYPNIILTNR 609
            +AI+ E K+ LE V+N+ EV   I +KL  L+E P R ECPLIYHLDV AMYPNIILTNR
Sbjct: 578  HAIEEEEKIPLEQVTNFQEVCEEIKKKLNSLKEVPNRIECPLIYHLDVGAMYPNIILTNR 637

Query: 610  LQPPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYYHLKKQIESE-FVDGT 668
            LQP ++V +  C ACDFN+PG TC R++ W WRGE     RS+Y+ +++Q+ESE F    
Sbjct: 638  LQPSAMVDEVTCAACDFNKPGATCQRQMTWQWRGEFMPASRSEYHRIQQQLESEKFPPLF 697

Query: 669  NGHLSKSFLDLPKMEQQSRLKDRLKKYCQKAYKRVLDKPVTELRE--AGICMRENSFYVD 726
             G   ++F +L + EQ    K RL  YC+KAYK++    VT L E    IC RENSFYVD
Sbjct: 698  PGKPPRAFHELTREEQAKYEKKRLADYCRKAYKKI---HVTRLEEKVTTICQRENSFYVD 754

Query: 727  TVRSFRDRRYEYKGLNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHKCILNSFY 786
            TVR+FRDRRYE+KGL+KVWK KLS A  SG++ +I+  ++M +LY+SLQLAHKCILNSFY
Sbjct: 755  TVRAFRDRRYEFKGLHKVWKKKLSSACESGDAAEIKRCKNMEILYESLQLAHKCILNSFY 814

Query: 787  GYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLPGSFPENF 846
            GYVMRKGARWYSMEMAG+V YTGA II  AR L+E+IG+PLELDTDGIWCVLP SFPENF
Sbjct: 815  GYVMRKGARWYSMEMAGIVCYTGANIITQARELVEQIGRPLELDTDGIWCVLPNSFPENF 874

Query: 847  TFKTKDLKK-KLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEFEVDGP 905
              K+ + KK K+TISYP  MLN+ V    TN QYQ L DP + TY T SE SI FEVDGP
Sbjct: 875  VIKSTNAKKPKVTISYPGAMLNILVKEGFTNHQYQELSDPATLTYITRSENSIFFEVDGP 934

Query: 906  YKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFLHG 965
            Y AMILPASKEEG  +KKRYAVFN+DG+LAELKGFE+KRRGEL+LIK+FQ+ +F+ FL G
Sbjct: 935  YLAMILPASKEEGKKLKKRYAVFNEDGSLAELKGFEVKRRGELQLIKIFQSSVFEAFLKG 994

Query: 966  STIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLADYGEQKSCAVTT 1025
            ST+EE Y++VA VA+ WLD+L ++  ++ D+EL + ISE+ +MS+ L DYGEQKS +++T
Sbjct: 995  STLEEVYASVAKVADYWLDVLYSKAANMPDAELFELISENRSMSRRLEDYGEQKSTSIST 1054

Query: 1026 ARRLSDFLGDTMVKDKGLRCQYIVACEPQGTPVSERAVPVAIFETDAEIMKFYLRKWCKT 1085
            A+RL++FLGD MVKD GL C+Y+++ +P+G+PV+ERA+P+AIF+ +  + + YLRKW K 
Sbjct: 1055 AKRLAEFLGDQMVKDAGLSCRYVISRKPEGSPVTERAIPLAIFQAEVGVKRHYLRKWLKN 1114

Query: 1086 SS--DVGIRSIVDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLYKKVREKED 1143
             S  D+ IRSI+DW YY +RL SAIQKIITIPAA+Q+V NPVPRV HPDWL+KK+ EK D
Sbjct: 1115 PSLQDLDIRSILDWDYYIERLGSAIQKIITIPAALQQVKNPVPRVRHPDWLHKKLLEKND 1174

Query: 1144 KFRQRKLVDIFSSLKKDDFLNKTCNAETNLMDENVEDLEDFPKKRRNSVNGPRPIVRCFE 1203
             ++Q+++ ++F+S  K     +    +++       D+EDF   +R     P        
Sbjct: 1175 IYKQKRINELFTSEGKRQITAQMQQPDSS----QTPDMEDFGIGKRLQPAVP-------- 1222

Query: 1204 VNNEQKTVKTTD--QVDSLRQQLEPS--EVSDQQPSSQNAIDTENIDRIVDYKGWLELKK 1259
            ++ ++K V T +  Q DS    L  S  EV  Q P     + T   +R+V    WL   K
Sbjct: 1223 ISTKRKRVPTAEDSQGDSQNLALTQSWREVLGQPP----PLGTTKEERLV----WLRYHK 1274

Query: 1260 RKWKDNLDRRK-KQKLGSLRASHQANGVSESLGDMINHKEAQRRTGVGSYFRRQETAMTR 1318
            +KW+    +RK +QK   L     A G     G +I   +A    G+GS+ RR   ++  
Sbjct: 1275 KKWELQARQRKERQKKRRLEDGDVAPGA----GGVIRETQA---AGLGSFLRRTARSILD 1327

Query: 1319 CHWQIIQLVPSSQSGVFLAWVVVEGIMVRIPITVPRLFYLNSKDPIVEK 1367
              WQI+Q+  SSQ G+F  W V+   +  I + +PR+F++N + P  E+
Sbjct: 1328 MPWQIVQIGESSQPGLFRLWAVIGNDLHCIKLNIPRVFFVNQRIPKPEE 1376



 Score =  328 bits (841), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 188/606 (31%), Positives = 314/606 (51%), Gaps = 66/606 (10%)

Query: 1442 LARYAHILWISDDGVPDLGGTSEEDECFA---DEVHQPVLTYPGAYRKVSVELKIHHLSV 1498
            L R+ H+LW+S    PDLGG   +D       DE     +  PG Y  V VEL I  L+V
Sbjct: 1599 LRRHNHLLWLSPSARPDLGGKEADDNRLVMEFDEKASVEINNPGCYNTVCVELDIQSLAV 1658

Query: 1499 NALLKSNQVNEMEGGGLFG--FD-------QDMNSGPYNNELCGFDETTSSAPAFRVVKQ 1549
            N++L+S+ +N++EG G  G  FD       +DM +G   + +  +DET   +  FR++K 
Sbjct: 1659 NSILQSHHINDLEGAGSMGISFDVLQQASLEDMVTGNQASSVASYDETALCSNTFRILKS 1718

Query: 1550 LIQRCLTDAVTSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEFR 1609
            ++   + +     NV+AD  + H YRWL SP S L+DP LHR LH +M+K+F  L+AEF+
Sbjct: 1719 MVVGWVKEITQYHNVYADNQVMHFYRWLRSPSSLLYDPALHRTLHNMMKKLFLQLVAEFK 1778

Query: 1610 KLGATIIFANFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLFM 1669
            +LG+++++ANF+++I+ T K  +  A AY + + +++ +RE+F  + +     W  LL+M
Sbjct: 1779 RLGSSVVYANFNRIILCTKKRRVEDAVAYVEYITQSIHSREIFHSLTISVSRCWEFLLWM 1838

Query: 1670 DQYNYGGIPARA----------------------------------DESLDDDSQVDIVS 1695
            D  NYGG+  +                                   DE  +D  +  + +
Sbjct: 1839 DPANYGGVKGKLPSSVHYGEKKKALDGEGDDGSEDEEEDDQPVNSDDEQSEDQVEESLEN 1898

Query: 1696 SWNIAEYLPK--EIQDHFVLVVSEFMYIPW----KHAQKLAASRASLQEGSSCTPSITVA 1749
            +WNI +YLP+    Q +F+++VS ++   +    +  ++ A     ++   +   S    
Sbjct: 1899 NWNIVQYLPQAASCQSYFLMIVSAYIVAVYHSMREEMRRNAPGNTPIKRRQNSQVSQEAN 1958

Query: 1750 AAENFESHIVQYVKGEISSYFTGKLLSIVRDAIHHMKKMNNDQHNS-PGVM---QTAANI 1805
            A       ++ + +  +++  T    +I +      KK+   +H + P  M      +++
Sbjct: 1959 ADGGAMPGLITFSQDYVANELTQNFFTITQKI---QKKVTGTRHATEPSEMFPILPGSHL 2015

Query: 1806 HKVDAPLEFIKHVCAAFALDQNVQHDVLVMRKNLLKYVRVREFAPEAEFRDPCPSFILPN 1865
               +  LEFIK+VC   ALD N+ + V  ++++LL+ V V EF+ +A+FRDPC S+ILP 
Sbjct: 2016 PLNNPALEFIKYVCEVLALDSNITNQVNKLKRDLLRLVDVGEFSEDAQFRDPCRSYILPE 2075

Query: 1866 VICSYCNDCRDLDLCRDMAL-----LAQDWHCAMPQCGQPYDREVMENALLQIVRQRERL 1920
            +IC  CN CRDLDLC+D A+     +   W C    C   YD + +E AL++ ++++   
Sbjct: 2076 IICRSCNFCRDLDLCKDPAINQDGSVLPQWVCT--NCQAEYDSDGIEMALVEALQKKMMA 2133

Query: 1921 YHLQDLVCIRCNQVKAAHLAEQCACAGSFRCKEDASDFRSKMQIFLNIANRQGFQLLQEC 1980
            + LQDLVC++C  VK A++   C CAG F           ++ +F NIA       L E 
Sbjct: 2134 FTLQDLVCMKCKGVKEANMPVYCNCAGDFTLTISVKVLLEQINVFRNIAQHYNMAHLLET 2193

Query: 1981 TSWILE 1986
              WI++
Sbjct: 2194 IVWIMQ 2199


>gi|351695801|gb|EHA98719.1| DNA polymerase epsilon catalytic subunit A [Heterocephalus glaber]
          Length = 2300

 Score = 1424 bits (3685), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 725/1434 (50%), Positives = 981/1434 (68%), Gaps = 81/1434 (5%)

Query: 25   EELEAKLGYDLFSEGDKRLGWLLTFASSSLEDEDTRKVYSCIDLYFVSQDGSTFKSKYKF 84
            ++++ + G++     D++ GWL+    + + DED R V S +D YF+  DGS FK    +
Sbjct: 42   DKMDLRFGFERLKAPDEKTGWLINMHPTEILDEDKRLV-SAVDYYFIQDDGSRFKVALPY 100

Query: 85   RPYFYAATKEKMEMDVEAYLRRRYESQIADIEILEKEDLDLKNHLSGLHKSYLKISFDTV 144
            +PYFY AT++  E +V +++ ++++ +IA +E + KEDLDL NHL GL +SY+K+SF TV
Sbjct: 101  KPYFYIATRKGCEREVSSFVSKKFQGKIAKVETVPKEDLDLPNHLVGLKRSYIKLSFHTV 160

Query: 145  QQLMDVKKDLLHVVERNQAKFDAAEAYESILTG------------KREQRPQDFLDCIVD 192
            + L+ V+K++   V++N+ +  A++ Y S+L+             +  ++  D LD IVD
Sbjct: 161  EDLVKVRKEVSPAVKKNREQDHASDTYTSMLSSVLQGGSVIADEEETSKKIADQLDNIVD 220

Query: 193  LREYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLLE--KRVDLLQRAEVHVCAFDIETTK 250
            +REYDVPYHIR +ID  +    WY+V        +E  +R DL++R +  V AFDIETTK
Sbjct: 221  MREYDVPYHIRLSIDLKIHVAHWYNVRYRGNAFPVEITRRDDLVERPDPVVLAFDIETTK 280

Query: 251  LPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNVNNE 310
            LPLKFPDA+ D IMMISYM+DGQGYLI NRE V EDIED E+TPKPE+EG F V N  +E
Sbjct: 281  LPLKFPDAETDQIMMISYMIDGQGYLITNREIVSEDIEDFEFTPKPEYEGPFCVFNEPDE 340

Query: 311  IELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDKNQGECRA 370
            + L++ WF H+QE KP I VTYNGD+FDWPF+E RAA HG  M +E+GFQ D +QGE +A
Sbjct: 341  VHLIQRWFEHIQETKPTIVVTYNGDFFDWPFVEARAAAHGLSMYQEIGFQKD-SQGEYKA 399

Query: 371  KFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQM----- 425
                H+DC  WVKRDSYLP GS  LKA  KAKLGYDP+E++PEDM R A E+PQ      
Sbjct: 400  PQCIHMDCLRWVKRDSYLPVGSHNLKAAAKAKLGYDPVELDPEDMCRMATEQPQARPWVL 459

Query: 426  ----------MASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEML 475
                      +A+YSVSDAVATYYLYM YVHPFIF+L TIIPM PDEVLRKGSGTLCE L
Sbjct: 460  TAELWFSPQALATYSVSDAVATYYLYMKYVHPFIFALCTIIPMEPDEVLRKGSGTLCEAL 519

Query: 476  LMVQAYKANVICPNKHQSDPEKFYRN-HLLESETYIGGHVECLESGVFRSDLPTSFKLDP 534
            LMVQA+ AN+I PNK + +  K   + H+L++ETY+GGHVE LESGVFRSD+P  F+++P
Sbjct: 520  LMVQAFHANIIFPNKQEQEFNKLTDDGHVLDAETYVGGHVEALESGVFRSDIPCRFRMNP 579

Query: 535  SAYEQLLNNLDRDLQYAIKVEGKMDLESVSNYDEVKNAIMEKLLRLQEEPIREECPLIYH 594
            +A++ LL  +++ +++AI+ E K+ LE  +N+ EV   I  KL  L++ P R ECPLIYH
Sbjct: 580  AAFDFLLQRVEKTMRHAIEEEEKVPLEQATNFQEVCEQIKTKLTSLKDVPNRIECPLIYH 639

Query: 595  LDVAAMYPNIILTNRLQPPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYY 654
            LDV AMYPNIILTNRLQP ++V +  C ACDFNRPG  C RK+ W WRGE     RS+Y+
Sbjct: 640  LDVGAMYPNIILTNRLQPSAMVDEATCAACDFNRPGANCQRKMAWQWRGEFMPASRSEYH 699

Query: 655  HLKKQIESE-----FVDGTNGHLSKSFLDLPKMEQQSRLKDRLKKYCQKAYKRVLDKPVT 709
             ++ Q+ESE     F +G     +++F +L + EQ    K RL  YC+KAYK++    V 
Sbjct: 700  RIQHQLESEKFPPLFPEGP----ARAFHELSREEQAKYEKRRLADYCRKAYKKIHVTKVE 755

Query: 710  ELREAGICMRENSFYVDTVRSFRDRRYEYKGLNKVWKGKLSEAKASGNSIKIQEAQDMVV 769
            E R   IC RENSFYVDTVR+FRDRRYE+KGL+KVWK KLS A  +G++ +++  ++M V
Sbjct: 756  E-RLTTICQRENSFYVDTVRAFRDRRYEFKGLHKVWKKKLSAAVEAGDAAEVKRCKNMEV 814

Query: 770  LYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLEL 829
            LYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAG+V +TGA II  AR LIE+IG+PLEL
Sbjct: 815  LYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGIVCFTGANIITQARELIEQIGRPLEL 874

Query: 830  DTDGIWCVLPGSFPENFTFKTKDLKK-KLTISYPCVMLNVDVARNNTNDQYQTLVDPVSK 888
            DTDGIWCVLP SFPENF  KT +LKK K+T+SYP  MLN+ V    TNDQYQ L +P S 
Sbjct: 875  DTDGIWCVLPNSFPENFVIKTTNLKKPKVTVSYPGAMLNIMVKEGFTNDQYQELAEPSSL 934

Query: 889  TYETHSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGEL 948
            TY T SE SI FEVDGPY AMILPASKEEG  +KKRYAVFN+DG+LAELKGFE+KRRGEL
Sbjct: 935  TYVTRSENSIFFEVDGPYLAMILPASKEEGKKLKKRYAVFNEDGSLAELKGFEVKRRGEL 994

Query: 949  KLIKVFQAELFDKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTM 1008
            +LIK+FQ+ +F+ FL GST+EE YS+VA VA+ WLD+L ++  ++ DSEL + ISE+ +M
Sbjct: 995  QLIKIFQSSVFEAFLKGSTLEEVYSSVAKVADYWLDVLYSKAANMPDSELFELISENRSM 1054

Query: 1009 SKSLADYGEQKSCAVTTARRLSDFLGDTMVKDKGLRCQYIVACEPQGTPVSERAVPVAIF 1068
            S+ L DYGEQKS +++TA+RL++FLGD MVKD GL C+YI++ +P+G+PV+ERA+P+AIF
Sbjct: 1055 SRKLEDYGEQKSTSISTAKRLAEFLGDQMVKDAGLSCRYIISRKPEGSPVTERAIPLAIF 1114

Query: 1069 ETDAEIMKFYLRKWCKTSS--DVGIRSIVDWSYYKQRLSSAIQKIITIPAAMQKVSNPVP 1126
            + +  I K +LRKW K+SS  D  IR+I+DW YY +RL SA+QKIITIPAA+Q+V NPVP
Sbjct: 1115 QAEPTIRKHFLRKWLKSSSLQDFDIRTILDWDYYIERLGSAVQKIITIPAALQQVKNPVP 1174

Query: 1127 RVVHPDWLYKKVREKEDKFRQRKLVDIFSSLKKDDFLNKTCNAETNLMDENVEDLEDFPK 1186
            RV HPDWL+KK+ EK D ++Q+K+ ++F    K   +     A          D+EDF  
Sbjct: 1175 RVKHPDWLHKKLLEKSDIYKQKKISELFVLEGKRQIV--MAQAPEGSARPGAPDIEDFGI 1232

Query: 1187 KRRNSVNGPRPIVRCFEVNNEQKTVKTTDQVDS--LRQQLEPSEVSDQQPSSQNAIDTEN 1244
             +      P P+V    V  ++K V    Q +S  L   +   E+  Q P+    + T  
Sbjct: 1233 SK-----PPHPMV---PVATKRKRVLWESQEESQDLMLIVPWQEILGQPPT----LGTTQ 1280

Query: 1245 IDRIVDYKGWLELKKRKW----KDNLDRRKKQKLGSLRASHQANGVSESLGDMINHKEAQ 1300
             + +V    WL+  K+KW    +  L +RK+Q+L S++ + +   + +            
Sbjct: 1281 EEWLV----WLQFHKKKWQLQARQRLAQRKRQRLESVKGALRHAALRDGPA--------- 1327

Query: 1301 RRTGVGSYFRRQETAMTRCHWQIIQLVPSSQSGVFLAWVVVEGIMVRIPITVPRLFYLNS 1360
               G+GS+ +R   ++    WQI+Q+  +SQ+G+F  W V+   +  I +++PR+FY+N 
Sbjct: 1328 --MGLGSFLQRTARSVLDLPWQIVQISETSQTGLFRLWAVIGSDLHCIKLSIPRVFYVNQ 1385

Query: 1361 KDPIVEK-FPGRRVNKTLPHGRRSFNLIEVMIDEDQFRKESKKLAALLADPEVE 1413
            +    E+    R+VN+ LP     +NL E  + E  +++   ++   L+ P++E
Sbjct: 1386 RVARAEEGVTCRKVNRVLPRSNLVYNLYEYSVPEAMYQEHINEINTELSAPDIE 1439



 Score =  316 bits (809), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 195/610 (31%), Positives = 313/610 (51%), Gaps = 73/610 (11%)

Query: 1442 LARYAHILWISDDGVPDLGGTSEEDECFA---DEVHQPVLTYPGAYRKVSVELKIHHLSV 1498
            L R+ H+LW+S    PDLGG   +D       D+     +   G Y  V VEL + +L+V
Sbjct: 1692 LQRHNHLLWLSPTARPDLGGKEADDNRLVMEFDDRATVEINSSGCYSTVCVELDLQNLAV 1751

Query: 1499 NALLKSNQVNEMEGGGLFG--FD-------QDMNSGPYNNELCGFDETTSSAPAFRVVKQ 1549
            N +L+S+ VN+MEG    G  FD       +DM +G   +    +DE    +  FR++K 
Sbjct: 1752 NTILQSHHVNDMEGASSMGISFDVIQQASLEDMVTGNQASAPASYDEAALCSSTFRILKS 1811

Query: 1550 LIQRCLTDAVTSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEFR 1609
            ++   + + +   N++AD  + H YRWL SP S LHDP LHR LH +M+K+F  L+AEF+
Sbjct: 1812 MVVGWVKEIMQYHNIYADNQVMHFYRWLRSPCSLLHDPALHRTLHNLMKKLFLQLIAEFK 1871

Query: 1610 KLGATIIFANFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLFM 1669
            +LG+++I+ANF+++I+ T K  +  A AY + +  ++ ++E+F  + +     W  LL+M
Sbjct: 1872 RLGSSVIYANFNRIILCTKKRRIEDAIAYVEYITNSIHSKEIFHSLTITFSRCWEFLLWM 1931

Query: 1670 DQYNYGGIPARADESL---DDDSQV-------------------------------DIV- 1694
            D  NYGGI  +   S+     DSQ                                D++ 
Sbjct: 1932 DPSNYGGIKGKVPSSVHCGQQDSQKREGAEDEQEDEEDQEEEPEEEEQGVEESDVEDLLE 1991

Query: 1695 SSWNIAEYLPK--EIQDHFVLVVSEFMYIPWKHAQK------LAASRASLQEGSSCTPSI 1746
            ++WNI ++LP+    Q +F+++VS ++   + H+ K         S    + G S     
Sbjct: 1992 NNWNILQFLPQAASCQSYFLMIVSAYIVAVY-HSMKGELRHSAPGSTPVKRRGPSQFSQE 2050

Query: 1747 TVAAAENFESHIVQYVKGEISSYFTGKLLSIVRDAIHHMKKMNNDQHNS-PGVM---QTA 1802
            T   A      ++ + +  +++  T    +I +      KK+   +H++ P  M      
Sbjct: 2051 TEGTAGALPG-VITFSQDYVANELTQNFFTITQKI---QKKVTGSRHSTKPSEMFPLLPG 2106

Query: 1803 ANIHKVDAPLEFIKHVCAAFALDQNVQHDVLVMRKNLLKYVRVREFAPEAEFRDPCPSFI 1862
            +++   +  LEFIK+VC   +LD N+ + V  + ++LL+ V V EF+ EA+FRDPC S++
Sbjct: 2107 SHLLLNNPALEFIKYVCKVLSLDTNISNQVNKLNRDLLRLVDVGEFSEEAQFRDPCRSYV 2166

Query: 1863 LPNVICSYCNDCRDLDLCRDM------ALLAQDWHCAMPQCGQPYDREVMENALLQIVRQ 1916
            LP VIC  CN CRDLDLC+D       A+L Q W C+   C   YD   +E AL++ +++
Sbjct: 2167 LPEVICCNCNFCRDLDLCKDSSFSQDGAVLPQ-WICS--NCQAAYDSATIEAALVEALQR 2223

Query: 1917 RERLYHLQDLVCIRCNQVKAAHLAEQCACAGSFRCKEDASDFRSKMQIFLNIANRQGFQL 1976
            +   + LQDLVC +C  VK  H+   C+CAG F        F  ++ IF NIA       
Sbjct: 2224 KLMAFTLQDLVCQKCGGVKETHMPVYCSCAGDFALTIHTQIFMDQISIFQNIAQHYDMSY 2283

Query: 1977 LQECTSWILE 1986
            L E   W+L+
Sbjct: 2284 LMETLEWLLQ 2293


>gi|344299262|ref|XP_003421306.1| PREDICTED: DNA polymerase epsilon catalytic subunit A [Loxodonta
            africana]
          Length = 2283

 Score = 1423 bits (3684), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 716/1414 (50%), Positives = 973/1414 (68%), Gaps = 56/1414 (3%)

Query: 25   EELEAKLGYDLFSEGDKRLGWLLTFASSSLEDEDTRKVYSCIDLYFVSQDGSTFKSKYKF 84
            ++++ + G+    E  ++ GWL+    + + DED R V S +D YF+  DGS FK    +
Sbjct: 42   DKMDLRFGFQRLKEPGEKTGWLINMHPTEVLDEDKRLV-SAVDYYFIQDDGSRFKVALPY 100

Query: 85   RPYFYAATKEKMEMDVEAYLRRRYESQIADIEILEKEDLDLKNHLSGLHKSYLKISFDTV 144
            +PYFY AT++  E +V ++L R+++ +IA +E + KEDLDL NHL GL ++Y+K+SF+TV
Sbjct: 101  KPYFYIATRKGCEREVSSFLSRKFQGKIAKVETVPKEDLDLPNHLVGLKRNYIKLSFNTV 160

Query: 145  QQLMDVKKDLLHVVERNQAKFDAAEAYESILTG------------KREQRPQDFLDCIVD 192
            + L+  +K++   V +N+ +  A++ Y ++L+             +  ++  D +D IVD
Sbjct: 161  EDLVKARKEISPAVRKNREQDHASDTYTAMLSSVLQGGGVITDEEETSKKIADQMDNIVD 220

Query: 193  LREYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLLE--KRVDLLQRAEVHVCAFDIETTK 250
            +REYDVPYHIR +ID  ++   WY+V    +   +E  +R DL++R +  V AFDIETTK
Sbjct: 221  MREYDVPYHIRLSIDLKIQVAHWYNVRYRGSAFPVEITRRDDLVERPDPVVLAFDIETTK 280

Query: 251  LPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNVNNE 310
            LPLKFPDA+ D IMMISYM+DGQGYLI NRE V EDIED E+TPKPE+EG F V N  +E
Sbjct: 281  LPLKFPDAETDQIMMISYMIDGQGYLITNREIVSEDIEDFEFTPKPEYEGPFCVFNEPDE 340

Query: 311  IELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDKNQGECRA 370
            + L++ WF H+QE KP I VTYNGD+FDWPF+E RAA HG  M +E+GFQ D +QGE +A
Sbjct: 341  VHLIQRWFEHVQETKPTIMVTYNGDFFDWPFVEARAAVHGLSMYQEIGFQKD-SQGEYKA 399

Query: 371  KFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQMMASYS 430
                H+DC  WVKRDSYLP GS  LKA  KAKLGYDP+E++PEDM R A E+PQ +A+YS
Sbjct: 400  PQCIHMDCLRWVKRDSYLPVGSHNLKAAAKAKLGYDPVELDPEDMCRMAAEQPQTLATYS 459

Query: 431  VSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVICPNK 490
            VSDAVATYY+YM YVHPFIF+L TIIPM PDEVLRKGSGTLCE LLMVQA+ AN+I PNK
Sbjct: 460  VSDAVATYYMYMKYVHPFIFALCTIIPMEPDEVLRKGSGTLCEALLMVQAFHANIIFPNK 519

Query: 491  HQSDPEKFYRN-HLLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQLLNNLDRDLQ 549
             + +  K   + H+L++ETY+GGHVE LESGVFRSD+P  F+++P+A++ LL  +++ + 
Sbjct: 520  QEQEFNKLTDDGHVLDAETYVGGHVEALESGVFRSDIPCRFRMNPAAFDFLLQRVEKTMH 579

Query: 550  YAIKVEGKMDLESVSNYDEVKNAIMEKLLRLQEEPIREECPLIYHLDVAAMYPNIILTNR 609
            +AI+ E K+ +E V+N+ EV + I  +L  L++ P R ECPLIYHLDV AMYPNIILTNR
Sbjct: 580  HAIEEEEKVPMEQVTNFQEVCDQIKTRLTSLKDVPNRIECPLIYHLDVGAMYPNIILTNR 639

Query: 610  LQPPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYYHLKKQIESE-FVDGT 668
            LQP ++V +  C ACDFN+PG  C RK+ W WRGE     RS+Y+ ++ Q+ESE F    
Sbjct: 640  LQPSAMVDEATCAACDFNKPGANCQRKMAWQWRGEFMPASRSEYHRIQHQLESEKFPPLI 699

Query: 669  NGHLSKSFLDLPKMEQQSRLKDRLKKYCQKAYKRVLDKPVTELREAGICMRENSFYVDTV 728
                +++F +L + EQ    K RL  YC+KAYK+ L     E R   IC RENSFYVDTV
Sbjct: 700  PEGPTRAFHELSREEQAKYEKRRLADYCRKAYKK-LHVTRVEQRLTTICQRENSFYVDTV 758

Query: 729  RSFRDRRYEYKGLNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHKCILNSFYGY 788
            R+FRDRRYE+KGL+KVWK KLS A   G++ +++  ++M +LYDSLQLAHKCILNSFYGY
Sbjct: 759  RAFRDRRYEFKGLHKVWKKKLSAAMEMGDAAEVKRCKNMEILYDSLQLAHKCILNSFYGY 818

Query: 789  VMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLPGSFPENFTF 848
            VMRKGARWYSMEMAG+V +TGA II  AR LIE+IG+PLELDTDGIWCVLP SFPENF  
Sbjct: 819  VMRKGARWYSMEMAGIVCFTGANIITQARELIEQIGRPLELDTDGIWCVLPNSFPENFVV 878

Query: 849  KTKDLKK-KLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEFEVDGPYK 907
            KT ++KK K+TISYP  MLN+ V    TN QYQ L +P S TY THSE SI FEVDGPY 
Sbjct: 879  KTTNVKKPKVTISYPGAMLNIMVKEGFTNHQYQELAEPSSLTYVTHSENSIFFEVDGPYL 938

Query: 908  AMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFLHGST 967
            AMILPASKEEG  +KKRYAVFN+DG+LAELKGFE+KRRGEL+LIK+FQ+ +F+ FL GST
Sbjct: 939  AMILPASKEEGKKLKKRYAVFNEDGSLAELKGFEVKRRGELQLIKIFQSSVFEAFLKGST 998

Query: 968  IEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLADYGEQKSCAVTTAR 1027
            +EE Y +VA VA+ WLD+L ++  ++ DSEL + ISE+ +MS+ L DYGEQKS +++TA+
Sbjct: 999  LEEVYGSVAKVADYWLDVLYSKAANMPDSELFELISENRSMSRKLEDYGEQKSTSISTAK 1058

Query: 1028 RLSDFLGDTMVKDKGLRCQYIVACEPQGTPVSERAVPVAIFETDAEIMKFYLRKWCKTSS 1087
            RL++FLGD MVKD GL C+YI++ +P+G+PV+ERA+P+AIF+ +  + K +LRKW K+SS
Sbjct: 1059 RLAEFLGDQMVKDAGLSCRYIISRKPEGSPVTERAIPLAIFQAEPTVRKHFLRKWLKSSS 1118

Query: 1088 --DVGIRSIVDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLYKKVREKEDKF 1145
              +  IR+I+DW YY +RL SAIQKIITIPAA+Q+V NPVPRV HPDWL+KK+ EK D +
Sbjct: 1119 LQEFDIRTILDWDYYIERLGSAIQKIITIPAALQQVKNPVPRVRHPDWLHKKLLEKNDVY 1178

Query: 1146 RQRKLVDIFS-SLKKDDFLNKTCNAETNLMDENVEDLEDFPKKRRNSVNGPRPIVRCFEV 1204
            +Q+K+ ++F    K+   +N+   A          D+EDF       +  P   V    V
Sbjct: 1179 KQKKISELFVLEGKRQVVMNQ---APEGSRSPGPPDVEDF-----GLMKPPHAAVPV--V 1228

Query: 1205 NNEQKTVKTTDQVDSLRQQLEPSEVSDQQPSSQNAIDTENIDRIVDYKGWLELKKRKW-- 1262
               ++ +  + +     +   P +    QP    A+ T   + +V    WL   K+KW  
Sbjct: 1229 TRRKRVLWESQEESQELELTVPWQDILGQPP---ALGTTQEEWLV----WLRFHKKKWQL 1281

Query: 1263 --KDNLDRRKKQKLGSLRASHQANGVSESLGDMINHKEAQRRTGVGSYFRRQETAMTRCH 1320
              +  L RRK+Q+L    ++ +A  + E              T +GS+ RR   ++    
Sbjct: 1282 QARQRLARRKRQRLEGTESAPKAGALREG-----------PTTALGSFLRRTARSILDLP 1330

Query: 1321 WQIIQLVPSSQSGVFLAWVVVEGIMVRIPITVPRLFYLNSKDPIVEKFPG-RRVNKTLPH 1379
            WQI+Q+  +SQ G+F  W V+   +  I +++PR+FY+N +    E+ P  R+VN+ LP 
Sbjct: 1331 WQIVQISETSQPGLFRLWAVIGSDLYCIRLSIPRVFYVNQRVAKAEEGPSYRKVNRVLPR 1390

Query: 1380 GRRSFNLIEVMIDEDQFRKESKKLAALLADPEVE 1413
                 +L E  + ED +++   ++   L+ P++E
Sbjct: 1391 ANVVHHLYEYSVPEDMYQEHINEINTELSAPDIE 1424



 Score =  328 bits (842), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 199/605 (32%), Positives = 312/605 (51%), Gaps = 65/605 (10%)

Query: 1442 LARYAHILWISDDGVPDLGGTSEEDECFADEV--HQPV-LTYPGAYRKVSVELKIHHLSV 1498
            L R++H+LW+S    PDLGG   +D     E+  H  V +   G Y  V VEL I +L+V
Sbjct: 1677 LQRHSHLLWLSPTSRPDLGGKEADDSRLVMELDDHATVEINSSGCYSTVCVELDIQNLAV 1736

Query: 1499 NALLKSNQVNEMEGGGLFG--FD-------QDMNSGPYNNEL-CGFDETTSSAPAFRVVK 1548
            N +L+S++VN+MEG    G  FD       +DM +G     +   +DET   +  FR++K
Sbjct: 1737 NTVLQSHRVNDMEGAASAGISFDAIPQASLEDMITGNQATSMPASYDETALCSSTFRILK 1796

Query: 1549 QLIQRCLTDAVTSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEF 1608
             ++   + +     NV+AD  + H YRWL SP S LHDP LHR LH +M+K+F  L+AEF
Sbjct: 1797 NMVVGWVKEITQYHNVYADNQVMHFYRWLRSPSSLLHDPALHRTLHSMMKKLFLQLIAEF 1856

Query: 1609 RKLGATIIFANFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLF 1668
            ++LG+++++ANF+++I+ T K  +  A AY + +  ++ ++E+F  + +     W  LL+
Sbjct: 1857 KRLGSSVVYANFNRIILCTKKRRIEDALAYVEYITNSIHSKEIFHSLTISFSRCWEFLLW 1916

Query: 1669 MDQYNYGGIPARADESLDDDSQVDIV--------------------------------SS 1696
            MD  NYGGI  +   S+    +  +                                 ++
Sbjct: 1917 MDPSNYGGIKGKVSPSIHCGQRESLEGEEAEREQEEEEEEEEEEEEGLEEARVEDLLENN 1976

Query: 1697 WNIAEYLPK--EIQDHFVLVVSEFMYIPWKHAQK------LAASRASLQEGSSCTPSITV 1748
            WNI ++LP+    Q +F+++VS ++   + H+ K         S    + G+S     T 
Sbjct: 1977 WNILQFLPQAASCQSYFLMIVSAYIVAVY-HSMKEELRRNAPGSTPVKRRGASQFSQETE 2035

Query: 1749 AAAENFESHIVQYVKGEISSYFTGKLLSIVRDAIHHMKKMNNDQHNSPGVMQTAANIHKV 1808
             AA      I  + +  +++  T    +I +     +    N    S    Q   +   +
Sbjct: 2036 GAAGALPGTIT-FSQDYVANELTQNFFTITQKIQKKVTGFRNSTEPSEMFPQLPGSHLLL 2094

Query: 1809 DAP-LEFIKHVCAAFALDQNVQHDVLVMRKNLLKYVRVREFAPEAEFRDPCPSFILPNVI 1867
            + P LEFIK+VC   +LD N+ + V  +R++LL+ V V EF+PEA+FRDPC S +L  VI
Sbjct: 2095 NNPALEFIKYVCKVLSLDTNITNQVNKLRRDLLRLVGVGEFSPEAQFRDPCRSHVLSEVI 2154

Query: 1868 CSYCNDCRDLDLCRDMALLAQD------WHCAMPQCGQPYDREVMENALLQIVRQRERLY 1921
            C  CN CRDLDLC+D A  +QD      W C+   C  PYD  V+E AL+  ++++   +
Sbjct: 2155 CHSCNFCRDLDLCKDSA-FSQDGAVLPQWLCS--NCEVPYDSTVIEAALVDALQKKLMAF 2211

Query: 1922 HLQDLVCIRCNQVKAAHLAEQCACAGSFRCKEDASDFRSKMQIFLNIANRQGFQLLQECT 1981
             LQDLVC++C  VK  H+   C+CAG F        F  +++IF NIA       L E  
Sbjct: 2212 TLQDLVCLKCAGVKETHMPVHCSCAGDFALTVHTKVFMEQIRIFRNIAQHFSMSYLLEIL 2271

Query: 1982 SWILE 1986
             W+L+
Sbjct: 2272 EWLLQ 2276


>gi|320164998|gb|EFW41897.1| DNA polymerase epsilon catalytic subunit [Capsaspora owczarzaki ATCC
            30864]
          Length = 2760

 Score = 1422 bits (3682), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 719/1448 (49%), Positives = 975/1448 (67%), Gaps = 77/1448 (5%)

Query: 24   EEELEAKLGYDLFSEGDKRLGWLLTFASSSLEDEDTRKVYSCIDLYFVSQDGSTFKSKYK 83
            ++ ++ K GYD ++   +RLGWL+    + + +E TR+ YS +D YFV +DG  FK+  +
Sbjct: 65   DDAMDVKFGYDRYTGSSERLGWLINMHPTVVINEGTRETYSAVDYYFVQEDGGRFKATVQ 124

Query: 84   FRPYFYAATKEKMEMDVEAYLRRRYESQIADIEILEKEDLDLKNHLSGLHKSYLKISFDT 143
            F+PYF+ A KE  E ++E YL+R+YE  ++ ++IL KEDLDLKNHL G+ + Y+K++F+ 
Sbjct: 125  FQPYFFIAVKEGRETEMEQYLKRKYEDSVSSVQILAKEDLDLKNHLVGIKQLYIKLTFNN 184

Query: 144  VQQLMDVKKDLLHVV------ERNQAKFDAAEAYESILTGKREQR----PQDFLDCIVDL 193
            VQQL+ V+K L+         E + AK+  A A+ S + G+        PQD L+ + D+
Sbjct: 185  VQQLLKVRKPLMAAAKKSAQREASAAKYSEA-AFISAIKGESADTSRGAPQDMLELVTDI 243

Query: 194  REYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLLEKRVDLLQRAEVHVCAFDIETTKLPL 253
            REYDVPYHIR AID  +  G WY+V++ +    +    + ++R +  V AFDIETTK  L
Sbjct: 244  REYDVPYHIRVAIDKGITVGHWYNVNVVNNVTQIVLFPERVERPDPIVLAFDIETTKQQL 303

Query: 254  KFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNVNNEIEL 313
            KFPD+  D IMMISYM+D QGYLIINRE V +DIED EYTPKPEF G F   NV +E  L
Sbjct: 304  KFPDSKSDHIMMISYMIDRQGYLIINREIVSDDIEDFEYTPKPEFPGPFICINVPDEKAL 363

Query: 314  LRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDKNQGECRAKFA 373
            +R WF H+ EV+P IYVT+NGD+FDWPF+E RAA +   M +E+GF  D N+ E +++  
Sbjct: 364  IRRWFDHILEVRPHIYVTFNGDFFDWPFIEARAAANDLSMLQEIGFAPDSNE-EYKSRPG 422

Query: 374  CHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQMMASYSVSD 433
             H+D F WVKRDSYLPQGSQGLKAVTKAKLGY+PLE++PE+MV  A E+PQ +A+YSVSD
Sbjct: 423  IHMDAFRWVKRDSYLPQGSQGLKAVTKAKLGYNPLELDPEEMVPMASEQPQTLANYSVSD 482

Query: 434  AVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVICPNKHQS 493
            AVATYYLYMTYVHPFIFS+  IIPM PDEVLRKGSGTLCE LLMVQ+++AN+I PNK ++
Sbjct: 483  AVATYYLYMTYVHPFIFSMCNIIPMEPDEVLRKGSGTLCETLLMVQSFEANIIMPNKQET 542

Query: 494  DPEKFYRNHLLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQLLNNLDRDLQYAIK 553
            DPEK +  HLL+SETY+GGHVE LESGVFRSDL + FKL+P A+E L+ +  R L++ ++
Sbjct: 543  DPEKMFNGHLLDSETYVGGHVEALESGVFRSDLDSKFKLEPKAFETLIRDTRRALEHTLR 602

Query: 554  VEGKMDLESVSNYDEVKNAIMEKLLRLQEEPIREECPLIYHLDVAAMYPNIILTNRLQPP 613
             E  +D  +V+N DE+  A+  +L  L++ P R E PLIYHLDV AMYPNIILTNRLQP 
Sbjct: 603  AEAGVDPATVTNMDEMVEAVHSRLRALRDTPNRLERPLIYHLDVGAMYPNIILTNRLQPS 662

Query: 614  SIVTDEVCTACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYYHLKKQIESEFVDGTN-GHL 672
            S+V +E C ACDFNRP   C R+++W+WRGE     RS+Y  +K Q+E+E V G   G  
Sbjct: 663  SLVDEETCAACDFNRPESNCQRRMKWLWRGEYLPATRSEYEMIKLQLEAERVPGLQPGDP 722

Query: 673  SKSFLDLPKMEQQSRLKDRLKKYCQKAYKRVLDKPVTELREAGICMRENSFYVDTVRSFR 732
            ++S+ +LP  EQ S LKDRLKKY + AYK+     + E RE+ +CMREN FYV+TV +FR
Sbjct: 723  TRSYHELPSEEQVSLLKDRLKKYIKNAYKKNKITKIEE-RESTVCMRENPFYVNTVLAFR 781

Query: 733  DRRYEYKGLNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHKCILNSFYGYVMRK 792
            DRRY+YK   K W+G  ++A    N+ +I+ A +  VLY+SLQLAHKCILNSFYGYVMR+
Sbjct: 782  DRRYQYKRELKTWQGNYAKAVEQRNATEIERATNRKVLYESLQLAHKCILNSFYGYVMRR 841

Query: 793  GARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLPGSFPENFTFKTKD 852
            GARW+SMEMAG+V +TGA II  AR ++E+IG+PLELDTDGIWC+LPG+FPEN  FKT D
Sbjct: 842  GARWFSMEMAGIVCHTGAHIITKAREIVEQIGRPLELDTDGIWCILPGTFPENVEFKTTD 901

Query: 853  LKK-KLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEFEVDGPYKAMIL 911
             K+ K+ ISYP  MLN+ V+   TNDQYQTL DP +  Y T +E SI FEVDGPY+AMIL
Sbjct: 902  PKRSKVVISYPGAMLNLMVSDEFTNDQYQTL-DPATGNYSTRTENSIFFEVDGPYRAMIL 960

Query: 912  PASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFLHGSTIEEC 971
            P+SKEE +L+KKRYAVFN +GTLAELKGFEIKRRGEL+LIK+FQ+E+FD FL G ++EEC
Sbjct: 961  PSSKEEDVLLKKRYAVFNMNGTLAELKGFEIKRRGELQLIKIFQSEVFDTFLKGGSLEEC 1020

Query: 972  YSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLADYGEQKSCAVTTARRLSD 1031
            Y AV  VAN WLD+L  +  D+ D +L+D ISE+ +MS+ L +YG QKS ++TTA+RL++
Sbjct: 1021 YRAVGDVANHWLDVLFTRAVDMNDEDLLDLISENRSMSRMLEEYGAQKSTSITTAKRLAE 1080

Query: 1032 FLGDTMVKDKGLRCQYIVACEPQGTPVSERAVPVAIF-ETDAEIMKFYLRKWCKTS--SD 1088
            FLGD MVKDKGL C++IV+ +P G PV+ERAVP+AIF E    + + +LR+W K    +D
Sbjct: 1081 FLGDDMVKDKGLACRFIVSKKPVGAPVTERAVPLAIFQEQRPGVQRHFLRRWLKDPGLTD 1140

Query: 1089 VGIRSIVDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLYKKVREKEDKFRQR 1148
            + +RS++DW YY +RL SA+QKI+TIPAAMQ V NPVPR+ HPDWL+K++  + D F+Q+
Sbjct: 1141 MDLRSVLDWEYYIERLGSAVQKIVTIPAAMQGVENPVPRIPHPDWLHKRISARNDVFKQK 1200

Query: 1149 KLVDIFSSLKKDDF------LNKTCNAETNLMDEN------VEDLEDFPKKRRNSVNGPR 1196
            K+ D+F+   K         +N+T     +L DEN        D+ED    R       R
Sbjct: 1201 KISDMFARGPKKPLADAAEPMNETVKGSKSLEDENRRLRAATVDIEDTLSGRAREAPMKR 1260

Query: 1197 PIVRCFEVNNEQKTVKTTDQVDSL----------RQQLEPSEVSDQQPSSQNAI------ 1240
            P+V           V++  ++D++                +    QQP  Q++       
Sbjct: 1261 PMVTKHAKRRADGAVQS--KLDTMVVAYSSNGGFGHARHGASQHSQQPKQQSSADNQAAS 1318

Query: 1241 -----DTENIDRIV--------DYKGWLELKKRKWKDNLDRRKKQKLGSLRASHQANGVS 1287
                 DT +  +I+        DY+ W++ +KRKW+   D RK+ K            + 
Sbjct: 1319 AAAAEDTRDWRQILGAAPDPSEDYQAWIKYQKRKWRLQRDERKRYKA----------DIE 1368

Query: 1288 ESLGDMINHKEAQR--RTGVGSYFRRQETAMTRCHWQIIQLVPSSQSGVFLAWVVVEGIM 1345
             +L  M ++    R   TG+ +  R Q   + +  W ++ + P+   G F AW +V G M
Sbjct: 1369 NTLKSMPSNLPVPRGPTTGIAAMLRTQARFLLQSPWHLVTIEPTELPGRFKAWALVAGSM 1428

Query: 1346 VRIPITVPRLFYLNSKDPIVE-KFPGRRVNKTLPHGRRSFNLIEVMIDEDQFRKESKKLA 1404
              + + +PR FY+N   P  + ++P  RV + LP  ++   L EV + E  FR+  +++ 
Sbjct: 1429 HALHLDIPRTFYVNMIVPNPDNRYP--RVTRILPRMQKCHTLYEVSMPEVDFRERQQEIL 1486

Query: 1405 ALLADPEV 1412
                DP +
Sbjct: 1487 NRFTDPNI 1494



 Score =  171 bits (434), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 97/260 (37%), Positives = 144/260 (55%), Gaps = 16/260 (6%)

Query: 1735 SLQEGSSCTPSITVAAAENFESHIVQYVKGEISSYFTGKLLSIVRDAIHHMKKMNNDQHN 1794
            S + G    P+    AA       V + +  + S  + +L SIVR+ IH+   +  D  +
Sbjct: 2501 SDKPGRRGRPAKGKKAALQIAKSEVAFSRKLVRSQISQRLFSIVRE-IHN--ALTGDSSS 2557

Query: 1795 S------PGVMQTAANIHKVDAPLEFIKHVCAAFALDQNVQHDVLVMRKNLLKYVRVREF 1848
            S      P +  +   +H  +  LEF K VC   ALD+++  +V +MRK+LL+ +  REF
Sbjct: 2558 SEAGVDFPQLPGSYLPLH--NPALEFTKSVCHVLALDKDLFEEVSLMRKSLLRLINAREF 2615

Query: 1849 APEAEFRDPCPSFILPNVICSYCNDCRDLDLCRDMALLAQD---WHCAMPQCGQPYDREV 1905
            +PE+ FR+PC SF L  V C  CN CRDLDLCR+  LLA +   WHC    C   Y+R+ 
Sbjct: 2616 SPESVFRNPCRSFTLCEVFCEACNSCRDLDLCRNPELLAANGGAWHCV--DCNAEYNRDS 2673

Query: 1906 MENALLQIVRQRERLYHLQDLVCIRCNQVKAAHLAEQCACAGSFRCKEDASDFRSKMQIF 1965
            +E+ L  IV++    + LQDL+C+ C QVK  +++  C C+G +R     +   S M++F
Sbjct: 2674 IESQLTSIVQRFSVTFQLQDLMCLTCGQVKGDNMSSFCGCSGQWRNTLATAPLVSSMRVF 2733

Query: 1966 LNIANRQGFQLLQECTSWIL 1985
            L+IA    F LL+E  SWIL
Sbjct: 2734 LSIARYHQFPLLEEVVSWIL 2753



 Score =  169 bits (427), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 89/213 (41%), Positives = 129/213 (60%), Gaps = 14/213 (6%)

Query: 1478 LTYPGAYRKVSVELKIHHLSVNALLKSNQVNEMEGGG--LFGFDQ-----------DMNS 1524
            L  PGAY  V VEL +  L+VN +L+S  VN+++GG   + GFD             MN 
Sbjct: 1899 LNVPGAYPHVCVELSLARLAVNTVLQSAHVNDIDGGAGVVAGFDMAPARTMEEQVAGMNV 1958

Query: 1525 GPYNNELCGFDETTSSAPAFRVVKQLIQRCLTDAVTSGNVFADAILQHLYRWLCSPHSKL 1584
               N     FDE+     AFRV+K L+   L +     N +ADA+L H YRWL SP S L
Sbjct: 1959 AA-NMLSATFDESALCGHAFRVLKSLVHTWLREVTHHRNFYADALLVHFYRWLKSPESSL 2017

Query: 1585 HDPVLHRILHKVMQKVFAMLLAEFRKLGATIIFANFSKVIIDTGKFDLSAAKAYCDSLLK 1644
            +DP L +++  +M+K+F  LLAEFR+LGATI++A+F+++++ T K  L  A AY D ++K
Sbjct: 2018 YDPGLCKMISNMMRKLFLQLLAEFRRLGATIVYASFNRIVLSTKKHTLPDAVAYVDYVVK 2077

Query: 1645 ALQTRELFEWIELEPVHFWHSLLFMDQYNYGGI 1677
             ++ + LF  IE+   ++W  LL+MDQ NYGG+
Sbjct: 2078 NVRNKTLFGGIEITATNWWDGLLWMDQANYGGV 2110


>gi|5565875|gb|AAD45244.1|AF123502_1 DNA polymerase epsilon catalytic subunit [Mus musculus]
          Length = 2284

 Score = 1422 bits (3681), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 725/1420 (51%), Positives = 972/1420 (68%), Gaps = 68/1420 (4%)

Query: 25   EELEAKLGYDLFSEGDKRLGWLLTFASSSLEDEDTRKVYSCIDLYFVSQDGSTFKSKYKF 84
            ++++ + G++   E  +R GWL+    + + DED R V S +D YF+  DGS FK    +
Sbjct: 42   DKMDLRFGFERLKEPGERTGWLINMHPTEILDEDKRLV-SAVDYYFIQDDGSRFKVALPY 100

Query: 85   RPYFYAATKEKMEMDVEAYLRRRYESQIADIEILEKEDLDLKNHLSGLHKSYLKISFDTV 144
             PYFY A ++  + +V ++L ++++ +IA +E + KEDLDL NHL GL +SY+K+SF TV
Sbjct: 101  MPYFYIAARKGCDREVSSFLSKKFQGKIAKLENVPKEDLDLPNHLVGLKRSYIKLSFHTV 160

Query: 145  QQLMDVKKDLLHVVERNQAKFDAAEAYESILTG------------KREQRPQDFLDCIVD 192
            + L+ V+K++   V++N+ +  A++ Y ++L+             +  ++  D LD IVD
Sbjct: 161  EDLVKVRKEISPAVKKNREQDHASDEYTTMLSSILQGGSVITDEEETSKKIADQLDNIVD 220

Query: 193  LREYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLLE--KRVDLLQRAEVHVCAFDIETTK 250
            +REYDVPYHIR +ID  +    WY+V        +E  +R DL++R +  V AFDIETTK
Sbjct: 221  MREYDVPYHIRLSIDLRIHVAHWYNVRFRGNAFPVEITRRDDLVERPDPVVLAFDIETTK 280

Query: 251  LPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNVNNE 310
            LPLKFPDA+ D IMMISYM+DGQGYLI NRE V EDIED E+TPKPE+EG F V N  +E
Sbjct: 281  LPLKFPDAETDQIMMISYMIDGQGYLITNREIVSEDIEDFEFTPKPEYEGPFCVFNEPDE 340

Query: 311  IELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDKNQGECRA 370
            + L++ WF H+QE KP I VTYNGD+FDWPF+E RAA HG  M +E+GFQ D +QGE +A
Sbjct: 341  VHLIQRWFEHIQETKPTIMVTYNGDFFDWPFVEARAAIHGLSMYQEIGFQKD-SQGEYKA 399

Query: 371  KFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQMMASYS 430
                H+DC  WVKRDSYLP GS  LKA  KAKLGYDP+E++PEDM R A E+PQ +A+YS
Sbjct: 400  PQCIHMDCLRWVKRDSYLPVGSHNLKAAAKAKLGYDPVELDPEDMCRMATEQPQTLATYS 459

Query: 431  VSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVICPNK 490
            VSDAVATYYLYM YVHPFIF+L TIIPM PDEVLRKGSGTLCE LLMVQA+ AN+I PNK
Sbjct: 460  VSDAVATYYLYMKYVHPFIFALCTIIPMEPDEVLRKGSGTLCEALLMVQAFHANIIFPNK 519

Query: 491  HQSDPEKFYRN-HLLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQLLNNLDRDLQ 549
             + +  K   + H+L++ETY+GGHVE LESGVFRSD+P  F+++P+A++ LL  +++ ++
Sbjct: 520  QEQEFNKLTDDGHVLDAETYVGGHVEALESGVFRSDIPCRFRMNPAAFDFLLQRVEKTMR 579

Query: 550  YAIKVEGKMDLESVSNYDEVKNAIMEKLLRLQEEPIREECPLIYHLDVAAMYPNIILTNR 609
            +AI+ E K+ +E  +N+ EV   I  KL  L++ P R ECPLIYHLDV AMYPNIILTNR
Sbjct: 580  HAIEEEEKVPVEQATNFQEVCEQIKTKLTSLKDVPNRIECPLIYHLDVGAMYPNIILTNR 639

Query: 610  LQPPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYYHLKKQIESE-----F 664
            LQP +IV +  C ACDFN+PG +C RK+ W WRGE     RS+Y+ ++ Q+ESE     F
Sbjct: 640  LQPSAIVDEATCAACDFNKPGASCQRKMAWQWRGEFMPASRSEYHRIQHQLESEKFPPLF 699

Query: 665  VDGTNGHLSKSFLDLPKMEQQSRLKDRLKKYCQKAYKRVLDKPVTELREAGICMRENSFY 724
             +G     +++F +L + EQ    K RL  YC+KAYK++    V E R   IC RENSFY
Sbjct: 700  PEGP----ARAFHELSREEQAKYEKRRLADYCRKAYKKIHVTKVEE-RLTTICQRENSFY 754

Query: 725  VDTVRSFRDRRYEYKGLNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHKCILNS 784
            VDTVR+FRDRRYE+KGL+KVWK KLS A   G++ +++  ++M +LYDSLQLAHKCILNS
Sbjct: 755  VDTVRAFRDRRYEFKGLHKVWKKKLSAAVEVGDASEVKRCKNMEILYDSLQLAHKCILNS 814

Query: 785  FYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLPGSFPE 844
            FYGYVMRKGARWYSMEMAG+V +TGA II  AR LIE+IG+PLELDTDGIWCVLP SFPE
Sbjct: 815  FYGYVMRKGARWYSMEMAGIVCFTGANIITQARELIEQIGRPLELDTDGIWCVLPNSFPE 874

Query: 845  NFTFKTKDLKK-KLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEFEVD 903
            NF  KT + KK KLTISYP  MLN+ V    TN QYQ L +P S TY THSE SI FEVD
Sbjct: 875  NFVIKTTNAKKPKLTISYPGAMLNIMVKEGFTNHQYQELTEPSSLTYVTHSENSIFFEVD 934

Query: 904  GPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFL 963
            GPY AMILPASKEEG  +KKRYAVFN+DG+LAELKGFE+KRRGEL+LIK+FQ+ +F+ FL
Sbjct: 935  GPYLAMILPASKEEGKKLKKRYAVFNEDGSLAELKGFEVKRRGELQLIKIFQSSVFEAFL 994

Query: 964  HGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLADYGEQKSCAV 1023
             GST+EE Y +VA VA+ WLD+L ++  ++ DSEL + ISE+ +MS+ L DYGEQKS ++
Sbjct: 995  KGSTLEEVYGSVAKVADYWLDVLYSKAANMPDSELFELISENRSMSRKLEDYGEQKSTSI 1054

Query: 1024 TTARRLSDFLGDTMVKDKGLRCQYIVACEPQGTPVSERAVPVAIFETDAEIMKFYLRKWC 1083
            +TA+RL++FLGD MVKD GL C+YI++ +P+G+PV+ERA+P+AIF+ +  + K +LRKW 
Sbjct: 1055 STAKRLAEFLGDQMVKDAGLSCRYIISRKPEGSPVTERAIPLAIFQAEPTVRKHFLRKWL 1114

Query: 1084 KTSS--DVGIRSIVDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLYKKVREK 1141
            K+SS  D  IR+I+DW YY +RL SAIQKIITIPAA+Q+V NPVPRV HPDWL+KK+ EK
Sbjct: 1115 KSSSLQDFDIRTILDWDYYIERLGSAIQKIITIPAALQQVKNPVPRVKHPDWLHKKLLEK 1174

Query: 1142 EDKFRQRKLVDIFSSLKKDDFLNKTCNAETNLMDENVEDLED--FPKKRRNSVNGPRPIV 1199
             D ++Q+K+ ++F    K   +     A  N +     D+ED    K   ++V       
Sbjct: 1175 NDIYKQKKISELFVLEGKRQIV--MAQASENSLSLCTPDMEDIGLTKPHHSTVPVATKRK 1232

Query: 1200 RCFEVNNEQKTVKTTDQVDSLRQQLEPSEVSDQQPSSQNAIDTENIDRIVDYKGWLELKK 1259
            R +E   E + +  T         +   EV  Q PS    + T   + +V    WL+  K
Sbjct: 1233 RVWETQKESQDIALT---------VPWQEVLGQPPS----LGTTQEEWLV----WLQFHK 1275

Query: 1260 RKW----KDNLDRRKKQKLGSLRASHQANGVSESLGDMINHKEAQRRTGVGSYFRRQETA 1315
            +KW    +  L  RKKQ+L S     +   + E           +  TG+GS+ RR   +
Sbjct: 1276 KKWQLQAQQRLALRKKQRLESAEDMPRLGPIRE-----------EPSTGLGSFLRRTARS 1324

Query: 1316 MTRCHWQIIQLVPSSQSGVFLAWVVVEGIMVRIPITVPRLFYLNSKDPIVEKFPG-RRVN 1374
            +    WQIIQ+  + Q+G+F  W ++   +  I +++PR+FY+N +    E  P  R+VN
Sbjct: 1325 IMDLPWQIIQISETRQAGLFRLWAIIGNDLHCIKLSIPRVFYVNQRVAKAEDGPAYRKVN 1384

Query: 1375 KTL-PHGRRSFNLIEVMIDEDQFRKESKKLAALLADPEVE 1413
            + L       +NL E  + ED +++   ++   L+ P++E
Sbjct: 1385 RGLFLRSNIVYNLYEYSVPEDMYQEHINEINTELSVPDIE 1424



 Score =  323 bits (827), Expect = 9e-85,   Method: Compositional matrix adjust.
 Identities = 195/609 (32%), Positives = 319/609 (52%), Gaps = 70/609 (11%)

Query: 1442 LARYAHILWISDDGVPDLGGTSEEDECFA---DEVHQPVLTYPGAYRKVSVELKIHHLSV 1498
            L  + H+LW+S    PDLGG   +D       D+     +   G Y  V VEL I +L+V
Sbjct: 1677 LQHHNHLLWLSPTSRPDLGGKEADDNRLVMEFDDRATVEINSSGCYSTVCVELDIQNLAV 1736

Query: 1499 NALLKSNQVNEMEGGGLFG--FD-------QDMNSG-PYNNELCGFDETTSSAPAFRVVK 1548
            N +L+S+ VN+MEG G  G  FD       +DM +G    + L  +DET   +  FR++K
Sbjct: 1737 NTILQSHHVNDMEGAGSMGISFDVIQQASLEDMVTGNQAASALANYDETALCSSTFRILK 1796

Query: 1549 QLIQRCLTDAVTSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEF 1608
             ++   + +     N++AD  + H YRWL SP S LHDP LHR LH +M+K+F  L+AEF
Sbjct: 1797 SMVVGWVKEITQYHNIYADNQVMHFYRWLQSPCSLLHDPALHRTLHNMMKKLFLQLIAEF 1856

Query: 1609 RKLGATIIFANFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLF 1668
            ++LG+++++ANF+++I+ T K  +  A AY + +  ++ ++E+F  + +     W  LL+
Sbjct: 1857 KRLGSSVVYANFNRIILCTKKRRIEDALAYVEYITNSIHSKEIFHSLTISFSRCWEFLLW 1916

Query: 1669 MDQYNYGGIPARADESL------DDDSQV--------------------------DIV-S 1695
            MD  NYGGI  +   S+      + DSQ                           D++ +
Sbjct: 1917 MDPSNYGGIKGKVPSSIHCGQVKEQDSQAREETDEEEEDKEKDEEEEGMGESEVEDLLEN 1976

Query: 1696 SWNIAEYLPK--EIQDHFVLVVSEFMYIPWKHAQK-----LAASRASLQEGSSCTPSITV 1748
            +WNI ++LP+    Q +F+++VS ++   ++  ++        S    ++G+S     + 
Sbjct: 1977 NWNILQFLPQAASCQSYFLMIVSAYIVAVYQSMKEELRHSAPGSTPVKRKGASQFSQESE 2036

Query: 1749 AAAENFESHIV---QYVKGEIS-SYFTGKLLSIVRDAIHHMKKMNNDQHNSPGVMQTAAN 1804
             A  +    I     YV  E++ S+FT  +   ++  +   +         P  +   ++
Sbjct: 2037 GATGSLPGMITFSQDYVANELTQSFFT--ITQKIQKKVTGSRNTTEPSEMFP--VLPGSH 2092

Query: 1805 IHKVDAPLEFIKHVCAAFALDQNVQHDVLVMRKNLLKYVRVREFAPEAEFRDPCPSFILP 1864
            +   +  LEFIK+VC   + D N+ + V  + ++LL+ V V EF+ EA+FRDPC S++LP
Sbjct: 2093 LLLNNPALEFIKYVCKVLSQDTNITNQVNKLNRDLLRLVDVGEFSEEAQFRDPCHSYVLP 2152

Query: 1865 NVICSYCNDCRDLDLCRDM------ALLAQDWHCAMPQCGQPYDREVMENALLQIVRQRE 1918
             VIC  CN CRDLDLC+D       A+L Q W C+   C  PYD   +E+AL++ ++++ 
Sbjct: 2153 EVICHSCNFCRDLDLCKDSSFSQDGAILPQ-WLCS--NCQAPYDSSAIESALVEALQRKL 2209

Query: 1919 RLYHLQDLVCIRCNQVKAAHLAEQCACAGSFRCKEDASDFRSKMQIFLNIANRQGFQLLQ 1978
              + LQDLVC++C  +K  H+   C+CAG F        F  +++IF NIA       LQ
Sbjct: 2210 MAFTLQDLVCLKCRGMKETHMPVYCSCAGDFTLTIRTEVFMEQIRIFQNIAKYYSMSYLQ 2269

Query: 1979 ECTSWILEV 1987
            E   W+L+ 
Sbjct: 2270 ETIEWLLQT 2278


>gi|326930012|ref|XP_003211147.1| PREDICTED: DNA polymerase epsilon catalytic subunit A-like [Meleagris
            gallopavo]
          Length = 2439

 Score = 1421 bits (3678), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 714/1385 (51%), Positives = 961/1385 (69%), Gaps = 58/1385 (4%)

Query: 56   DEDTRKVYSCIDLYFVSQDGSTFKSKYKFRPYFYAATKEKMEMDVEAYLRRRYESQIADI 115
            DED R V S +D YF+ +DGS FK    +RPYFY AT++  E +V ++L ++++ +IA +
Sbjct: 228  DEDRRAV-SAVDYYFIQEDGSRFKVALPYRPYFYVATQQGCEREVSSFLAKKFQGKIAKL 286

Query: 116  EILEKEDLDLKNHLSGLHKSYLKISFDTVQQLMDVKKDLLHVVERNQAKFDAAEAYESIL 175
            E + KEDLDL NHL GL + YLK+SF TV +L+ V+K++   V +N+ +  A++ Y S+L
Sbjct: 287  ETVPKEDLDLPNHLVGLKRHYLKLSFSTVDELVKVRKEISPAVRKNRERDHASDVYTSML 346

Query: 176  TGK------------REQRPQDFLDCIVDLREYDVPYHIRFAIDNDVRCGQWYDVSI--S 221
            +                ++  + +D IVD+REYDVPYH+R +ID  +    WY+V    S
Sbjct: 347  SSALAGGSLTTAEEGASKKVTNQMDNIVDMREYDVPYHVRLSIDLKIHVAHWYNVRYRGS 406

Query: 222  STGPLLEKRVDLLQRAEVHVCAFDIETTKLPLKFPDADYDIIMMISYMLDGQGYLIINRE 281
            +  P + +R DL++R +  V AFDIETTKLPLKFPDA+ D IMMISYM+DGQGYLI NRE
Sbjct: 407  TFPPEITRRDDLVERPDPVVLAFDIETTKLPLKFPDAETDQIMMISYMIDGQGYLITNRE 466

Query: 282  CVGEDIEDLEYTPKPEFEGYFKVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPF 341
             V EDIED E+TPKPE+EG F V N  +E  L++ WF H+QE KP I VTYNGD+FDWPF
Sbjct: 467  IVSEDIEDFEFTPKPEYEGPFCVFNEPDEAHLIQRWFEHVQETKPTIIVTYNGDFFDWPF 526

Query: 342  LETRAAHHGFKMSEELGFQCDKNQGECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKA 401
            +E RAA HG  M +E+GFQ D +QGE +A    H+DC  WVKRDSYLP GS  LKA  KA
Sbjct: 527  VEARAAAHGINMYQEIGFQKD-SQGEYKASQCIHMDCLRWVKRDSYLPVGSHNLKAAAKA 585

Query: 402  KLGYDPLEVNPEDMVRFAKEKPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPD 461
            KLGYDP+E++PE+M R A E+PQ +A+YSVSDAVATYY+YM YVHPFIF+L TIIPM PD
Sbjct: 586  KLGYDPVELDPEEMCRMATEEPQTLATYSVSDAVATYYMYMKYVHPFIFALCTIIPMEPD 645

Query: 462  EVLRKGSGTLCEMLLMVQAYKANVICPNKHQSDPEKFYRN-HLLESETYIGGHVECLESG 520
            EVLRKGSGTLCE LLMVQAY AN+I PNK + +  K   + H+L+SETY+GGHVE LESG
Sbjct: 646  EVLRKGSGTLCEALLMVQAYHANIIFPNKQEQEFNKLTEDGHVLDSETYVGGHVEALESG 705

Query: 521  VFRSDLPTSFKLDPSAYEQLLNNLDRDLQYAIKVEGKMDLESVSNYDEVKNAIMEKLLRL 580
            VFRSD+P  FK++P+A++ L+ N+++ L++AI+ E  + L+ V+N+ EV + I  KL  L
Sbjct: 706  VFRSDIPCRFKMNPAAFDYLVQNVEKTLRHAIEEEEGLPLDQVTNFQEVCDEIKVKLNSL 765

Query: 581  QEEPIREECPLIYHLDVAAMYPNIILTNRLQPPSIVTDEVCTACDFNRPGKTCLRKLEWV 640
            ++ P R ECPLIYHLDV AMYPNIILTNRLQP ++V +  C ACDFN+PG  C R++ W 
Sbjct: 766  KDVPNRIECPLIYHLDVGAMYPNIILTNRLQPSAMVDEATCAACDFNKPGANCQRRMTWQ 825

Query: 641  WRGEIFMGKRSDYYHLKKQIESE-----FVDGTNGHLSKSFLDLPKMEQQSRLKDRLKKY 695
            WRGE     RS+Y+ +++Q+ESE     + DG      ++F +L + EQ    K RL  Y
Sbjct: 826  WRGEFMPASRSEYHRIQQQLESEKFPPLYPDGA----PRAFHELSREEQAKYEKKRLADY 881

Query: 696  CQKAYKRVLDKPVTELREAGICMRENSFYVDTVRSFRDRRYEYKGLNKVWKGKLSEAKAS 755
            C+KAYK++    V E R   IC RENSFYVDTVR+FRDRRYE+KGL+KVWK KLS A  +
Sbjct: 882  CRKAYKKIHVTKVEE-RVTTICQRENSFYVDTVRAFRDRRYEFKGLHKVWKKKLSAAMET 940

Query: 756  GNSIKIQEAQDMVVLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQN 815
            G++ +++  ++M +LYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAG+V +TGA II  
Sbjct: 941  GDASEVKRCKNMEILYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGIVCFTGANIITQ 1000

Query: 816  ARLLIEKIGKPLELDTDGIWCVLPGSFPENFTFKTKDLKK-KLTISYPCVMLNVDVARNN 874
            AR LIE+IG+PLELDTDGIWCVLP SFPENF  K+ + KK K+TISYP  MLN+ V    
Sbjct: 1001 ARELIEQIGRPLELDTDGIWCVLPNSFPENFVIKSTNAKKPKVTISYPGAMLNILVKEGF 1060

Query: 875  TNDQYQTLVDPVSKTYETHSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTL 934
            TNDQYQ L DP S TY T SE SI FEVDGPY AMILPASKEEG  +KKRYAVFN+DG+L
Sbjct: 1061 TNDQYQELQDPASLTYVTRSENSIFFEVDGPYLAMILPASKEEGKKLKKRYAVFNEDGSL 1120

Query: 935  AELKGFEIKRRGELKLIKVFQAELFDKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIA 994
            AELKGFE+KRRGEL+L+K+FQ+ +F+ FL G+T+EE Y++VA VA+ WLD+L ++  ++ 
Sbjct: 1121 AELKGFEVKRRGELQLVKIFQSSVFEAFLKGTTLEEVYASVAKVADYWLDVLYSKAANMP 1180

Query: 995  DSELIDYISESSTMSKSLADYGEQKSCAVTTARRLSDFLGDTMVKDKGLRCQYIVACEPQ 1054
            DSEL + ISE+ +MS+ L DYGEQKS +++TA+RL++FLGD MVKD GL C++I++ +P+
Sbjct: 1181 DSELFELISENRSMSRKLEDYGEQKSTSISTAKRLAEFLGDQMVKDAGLSCRFIISKKPE 1240

Query: 1055 GTPVSERAVPVAIFETDAEIMKFYLRKWCKTSS--DVGIRSIVDWSYYKQRLSSAIQKII 1112
            G+PV+ERA+P+AIF+ +  + K YLRKW K+ S  D  IR+I+DW YY +RL S IQKII
Sbjct: 1241 GSPVTERAIPLAIFQAEPSVRKHYLRKWLKSPSLQDFNIRAILDWDYYIERLGSTIQKII 1300

Query: 1113 TIPAAMQKVSNPVPRVVHPDWLYKKVREKEDKFRQRKLVDIFSSLKKDDFLNKTCNAETN 1172
            TIPAA+Q+V NPVPRV HPDWL+KK+ EK D ++Q+K+ ++F+S  K   L       T+
Sbjct: 1301 TIPAALQQVKNPVPRVRHPDWLHKKLLEKNDVYKQKKINELFTSEGKRQVLANQPQEGTS 1360

Query: 1173 LMDENVEDLEDFPKKRRNSVNGPRPIVRCFEVNNEQKTVKTTDQVDSLRQQLEPSEVSDQ 1232
                 V D+EDF   +R   + P        + N++K V T ++   + Q LE S+   +
Sbjct: 1361 --SSQVGDIEDFGAAKRLQPSVP--------IANKRKRVPTAEESQEMSQSLELSQSWRE 1410

Query: 1233 ---QPSSQNAIDTENIDRIVDYKGWLELKKRKWKDNLDRRKKQKLGSLRASHQANGVSES 1289
                P S      E +        WL   ++KW+    +R++++         +      
Sbjct: 1411 ILGPPPSMGTTKEELV-------AWLRFHQKKWELQARQRRERQKRRRLEDGGSAAGGGV 1463

Query: 1290 LGDMINHKEAQRRTGVGSYFRRQETAMTRCHWQIIQLVPSSQSGVFLAWVVVEGIMVRIP 1349
            + D ++        G+GSY RR   ++    WQI+Q+  +SQ G+F  W V+   +  I 
Sbjct: 1464 VRDALSR-------GLGSYLRRTARSILDLPWQIVQIAETSQPGLFKLWAVIGSDLHCIK 1516

Query: 1350 ITVPRLFYLNSKDPIVEKFPG-RRVNKTLPHGRRSFNLIEVMIDEDQFRKESKKLAALLA 1408
            +++PR+FY+N +    E+    R+VN+ LP     +NL E  + ED +++   ++ A L+
Sbjct: 1517 LSIPRVFYVNQRVAKPEEGAVYRKVNRILPRSNLVYNLYEYSVPEDMYQEHINEINADLS 1576

Query: 1409 DPEVE 1413
             P++E
Sbjct: 1577 APDIE 1581



 Score =  322 bits (824), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 200/610 (32%), Positives = 313/610 (51%), Gaps = 78/610 (12%)

Query: 1442 LARYAHILWISDDGVPDLGGTSEEDECFA---DEVHQPVLTYPGAYRKVSVELKIHHLSV 1498
            L R+ H+LW+S    PDLGG   +D       DE     +  PG Y  V +EL I  L+V
Sbjct: 1834 LRRHNHLLWLSPTARPDLGGKEADDNRLVMEFDERASVEINNPGCYSTVCLELDIQSLAV 1893

Query: 1499 NALLKSNQVNEMEGGGLFG--FD-------QDMNSG-PYNNELCGFDETTSSAPAFRVVK 1548
            N +L+S+ VN+MEGG      FD       +DM +G    N    +DET   +  FR++K
Sbjct: 1894 NTVLQSHHVNDMEGGSSMSISFDVIQQASLEDMVTGNQAANIPASYDETALCSNTFRILK 1953

Query: 1549 QLIQRCLTDAVTSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEF 1608
             ++   + +     N++AD  + H YRWL SP S L+DP LHR LH +M+K+F  L+AEF
Sbjct: 1954 SMVVSWVKEITQYHNIYADNQVIHFYRWLRSPSSLLYDPALHRTLHNMMKKLFLQLVAEF 2013

Query: 1609 RKLGATIIFANFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLF 1668
            R+LG+++++ANF+++I+ T K  +  A +Y + ++ ++ ++E+F  + +     W  LL+
Sbjct: 2014 RRLGSSVVYANFNRIILCTKKRRIEDAISYMEYIINSIHSKEIFHSLTISFSRCWEFLLW 2073

Query: 1669 MDQYNYGGIPARADESL----DDDSQVDIV---------------------------SSW 1697
            MD  NYGGI  +    +     D S    +                           +SW
Sbjct: 2074 MDPANYGGIKGKVHSRIHCGEKDTSNKQALEEGDSEEEEEVGEEDEEDESNVEELLENSW 2133

Query: 1698 NIAEYLPK--EIQDHFVLVVSEFMYIPWKHAQKLAASR---ASLQEGSSCTPSITVAAAE 1752
            NI ++LP+    Q++F+++VS ++   + H+ K    R    S       T  +T  A  
Sbjct: 2134 NIVQFLPQAASCQNYFLMIVSAYIVAVY-HSMKEELRRNAPGSTPVKRRGTSQVTQEAQG 2192

Query: 1753 NFES--HIVQYVKGEISSYFTGKLLSIVRDAIHHMKKMNNDQHNS---------PGVMQT 1801
               +   ++ + +  +++  T    +I +      KKM+  +H +         PG    
Sbjct: 2193 ETGAMPGMITFSQDYVANELTQSFFTITQKI---QKKMSGSRHTTEPSDLFPVLPGSYLP 2249

Query: 1802 AANIHKVDAPLEFIKHVCAAFALDQNVQHDVLVMRKNLLKYVRVREFAPEAEFRDPCPSF 1861
              N       LEFIK+VC   +LD NV + V  +R++LL+ + V EF+ EA+FRDPC S+
Sbjct: 2250 LNN-----PALEFIKYVCQVLSLDANVTNQVNKLRRDLLRLIEVGEFSDEAQFRDPCRSY 2304

Query: 1862 ILPNVICSYCNDCRDLDLCRDMALLAQD------WHCAMPQCGQPYDREVMENALLQIVR 1915
            +LP VIC  CN CRDLDLC+D A L+QD      W C+   C   YD + +E AL++ ++
Sbjct: 2305 VLPEVICRNCNFCRDLDLCKDPA-LSQDGSVLPSWVCS--NCQAQYDSDSIEMALVEALQ 2361

Query: 1916 QRERLYHLQDLVCIRCNQVKAAHLAEQCACAGSFRCKEDASDFRSKMQIFLNIANRQGFQ 1975
            ++   + LQDLVC +C+ VK  H+   C+CAG F     +  F   + IF NIA   G  
Sbjct: 2362 KKLMAFMLQDLVCKKCHGVKDTHMPVYCSCAGDFALTISSQTFMEHITIFQNIARHYGMA 2421

Query: 1976 LLQECTSWIL 1985
             L E   W+L
Sbjct: 2422 HLLETIEWLL 2431


>gi|291412547|ref|XP_002722544.1| PREDICTED: DNA-directed DNA polymerase epsilon [Oryctolagus
            cuniculus]
          Length = 2411

 Score = 1421 bits (3678), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 722/1415 (51%), Positives = 975/1415 (68%), Gaps = 58/1415 (4%)

Query: 25   EELEAKLGYDLFSEGDKRLGWLLTFASSSLEDEDTRKVYSCIDLYFVSQDGSTFKSKYKF 84
            ++++ + G++   E  ++ GWL+    + + DED R + S +D YF+  DGS FK    +
Sbjct: 165  DKMDLRFGFERLKEPGEKTGWLINMHPTEILDEDKRLI-SAVDYYFIQDDGSRFKVALPY 223

Query: 85   RPYFYAATKEKMEMDVEAYLRRRYESQIADIEILEKEDLDLKNHLSGLHKSYLKISFDTV 144
            +PYFY AT++  E +V ++L ++++ +IA +E + KEDLDL NHL GL ++Y+K+SF TV
Sbjct: 224  KPYFYIATRKGCEREVSSFLSKKFQGKIAKVETVPKEDLDLPNHLVGLKRNYIKLSFHTV 283

Query: 145  QQLMDVKKDLLHVVERNQAKFDAAEAYESILTG------------KREQRPQDFLDCIVD 192
            + L+ V+K++   V++N+ +  A+  Y ++L+             +  ++  + LD IVD
Sbjct: 284  EDLVKVRKEVSPAVKKNREQDHASNTYTAMLSSVLQGGGVITDEEETSKKIANQLDNIVD 343

Query: 193  LREYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLLE--KRVDLLQRAEVHVCAFDIETTK 250
            +REYDVPYHIR +ID  +    WY+V        +E  +R DL++R +  V AFDIETTK
Sbjct: 344  MREYDVPYHIRLSIDLKIHVAHWYNVRYRGNAFPVEITRRDDLVERPDPVVLAFDIETTK 403

Query: 251  LPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNVNNE 310
            LPLKFPDA+ D IMMISYM+DGQGYLI NRE V EDIED E+TPK E+EG F V N  +E
Sbjct: 404  LPLKFPDAETDQIMMISYMIDGQGYLITNREIVSEDIEDFEFTPKQEYEGPFCVFNEPDE 463

Query: 311  IELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDKNQGECRA 370
            + L++ WF H+QE KP I VTYNGD+FDWPF+E RAA HG  M +E+GFQ D +QGE +A
Sbjct: 464  VHLIQRWFEHVQETKPTIMVTYNGDFFDWPFVEARAAVHGLSMYQEIGFQKD-SQGEYKA 522

Query: 371  KFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQMMASYS 430
                H+DC  WVKRDSYLP GS  LKA  KAKLGYDP+E++PEDM R A E+PQ +A+YS
Sbjct: 523  PQCIHMDCLRWVKRDSYLPVGSHNLKAAAKAKLGYDPVELDPEDMCRMATEQPQTLATYS 582

Query: 431  VSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVICPNK 490
            VSDAVATYYLYM YVHPFIF+L TIIPM PDEVLRKGSGTLCE LLMVQA+ AN+I PNK
Sbjct: 583  VSDAVATYYLYMKYVHPFIFALCTIIPMEPDEVLRKGSGTLCEALLMVQAFHANIIFPNK 642

Query: 491  HQSDPEKFYRN-HLLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQLLNNLDRDLQ 549
             + +  K   + H+L++ETY+GGHVE LESGVFRSD+P  F+++P+A++ LL  +++ L+
Sbjct: 643  QEQEFNKLTEDGHVLDAETYVGGHVEALESGVFRSDIPCRFRMNPAAFDFLLQRVEKTLR 702

Query: 550  YAIKVEGKMDLESVSNYDEVKNAIMEKLLRLQEEPIREECPLIYHLDVAAMYPNIILTNR 609
            +AI+ E K+ +E V+N+ EV + I  KL  L++ P R ECPLIYHLDV AMYPNIILTNR
Sbjct: 703  HAIEEEEKVPMEQVTNFQEVCDEIKTKLTSLKDVPNRIECPLIYHLDVGAMYPNIILTNR 762

Query: 610  LQPPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYYHLKKQIESE-----F 664
            LQP ++V +  C ACDFN+PG  C RK+ W WRGE     RS+Y+ ++ Q+ESE     F
Sbjct: 763  LQPSAMVDEATCAACDFNKPGANCQRKMAWQWRGEFMPASRSEYHRIQHQLESEKFPPLF 822

Query: 665  VDGTNGHLSKSFLDLPKMEQQSRLKDRLKKYCQKAYKRVLDKPVTELREAGICMRENSFY 724
             +G     +++F +L + EQ    K RL  YC+KAYK++    V E R   IC RENSFY
Sbjct: 823  PEGP----ARAFHELSREEQAKYEKRRLADYCRKAYKKIHITKVEE-RLTTICQRENSFY 877

Query: 725  VDTVRSFRDRRYEYKGLNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHKCILNS 784
            VDTVR+FRDRRYE+KGL+KVWK KLS A   G++ +++  ++M VLYDSLQLAHKCILNS
Sbjct: 878  VDTVRAFRDRRYEFKGLHKVWKKKLSAAVEVGDAAEVKRCKNMEVLYDSLQLAHKCILNS 937

Query: 785  FYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLPGSFPE 844
            FYGYVMRKGARWYSMEMAG+V +TGA +I  AR LIE+IG+PLELDTDGIWCVLP SFPE
Sbjct: 938  FYGYVMRKGARWYSMEMAGIVCFTGANLITQARELIEQIGRPLELDTDGIWCVLPNSFPE 997

Query: 845  NFTFKTKDLKK-KLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEFEVD 903
            NF  KT ++KK K+TISYP  MLN+ V    TNDQYQ L +P S TY T SE SI FEVD
Sbjct: 998  NFVIKTTNMKKPKVTISYPGAMLNIMVKEGFTNDQYQELAEPSSLTYVTRSENSIFFEVD 1057

Query: 904  GPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFL 963
            GPY AMILPASKEEG  +KKRYAVFN+DG+LAELKGFE+KRRGEL+LIK+FQ+ +F+ FL
Sbjct: 1058 GPYLAMILPASKEEGKKLKKRYAVFNEDGSLAELKGFEVKRRGELQLIKIFQSSVFEAFL 1117

Query: 964  HGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLADYGEQKSCAV 1023
             GST+EE YS+VA VA+ WLD+L ++  ++ D+EL + ISE+ +MS+ L DYGEQKS ++
Sbjct: 1118 KGSTLEEVYSSVAKVADYWLDVLYSKAANMPDAELFELISENRSMSRKLEDYGEQKSTSI 1177

Query: 1024 TTARRLSDFLGDTMVKDKGLRCQYIVACEPQGTPVSERAVPVAIFETDAEIMKFYLRKWC 1083
            +TA+RL++FLGD MVKD GL C+YI++ +P+G+PV+ERA+P+AIF+ +  + K +LRKW 
Sbjct: 1178 STAKRLAEFLGDQMVKDAGLSCRYIISRKPEGSPVTERAIPLAIFQAEPTVRKHFLRKWL 1237

Query: 1084 KTSS--DVGIRSIVDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLYKKVREK 1141
            ++SS  D  IR+I+DW YY +RL SAIQKIITIPAA+Q+V NPVPRV HPDWL+KK+ EK
Sbjct: 1238 RSSSLQDFDIRTILDWDYYIERLGSAIQKIITIPAALQQVKNPVPRVKHPDWLHKKLLEK 1297

Query: 1142 EDKFRQRKLVDIFSSLKKDDFLNKTCNAETNLMDENVEDLEDFPKKRRNSVNGPRPIVRC 1201
             D ++Q+K+ ++F    K   +  T             D+EDF          P+     
Sbjct: 1298 TDVYKQKKISELFVLEGKRQVI--TAQVPEGSPRPGAPDMEDF--------GLPKLPPSA 1347

Query: 1202 FEVNNEQKTVKTTDQVDS--LRQQLEPSEVSDQQPSSQNAIDTENIDRIVDYKGWLELKK 1259
              V  ++K +    Q +S  L   +   EV  Q P    A+ T   + +V    WL   K
Sbjct: 1348 VPVATKRKRILWESQEESQDLALTVPWQEVLGQPP----ALGTTQEEWLV----WLRFHK 1399

Query: 1260 RKWKDNLDRRKKQKLGSLRASHQANGVSESLGDMINHKEAQRRTGVGSYFRRQETAMTRC 1319
            +KW+  L  R++      R S    G S      +     +  TG+GS+ RR   ++   
Sbjct: 1400 KKWQ--LQARQRMARRKRRRSELEEGASR-----LTAVRDRSATGLGSFLRRTARSVLDL 1452

Query: 1320 HWQIIQLVPSSQSGVFLAWVVVEGIMVRIPITVPRLFYLNSKDPIVEKFPG-RRVNKTLP 1378
             WQI+Q+  +SQ+G+F  W VV   +  I +++PR+FY+N +   VE+ P  R+VN+ LP
Sbjct: 1453 PWQIVQISETSQAGLFRLWAVVGSDLHCIKLSIPRVFYVNQRVAKVEEGPSYRKVNRVLP 1512

Query: 1379 HGRRSFNLIEVMIDEDQFRKESKKLAALLADPEVE 1413
                 +NL E  + E+ +++   ++   L+ P++E
Sbjct: 1513 RSNVVYNLYEYSVPEELYQEHINEINTELSAPDIE 1547



 Score =  314 bits (804), Expect = 3e-82,   Method: Compositional matrix adjust.
 Identities = 195/613 (31%), Positives = 311/613 (50%), Gaps = 76/613 (12%)

Query: 1442 LARYAHILWISDDGVPDLGGTSEEDECFA---DEVHQPVLTYPGAYRKVSVELKIHHLSV 1498
            L R+ H+LW+S    PDLGG   +D       D+     +   G Y  V VEL + +L+V
Sbjct: 1800 LQRHNHLLWLSPTARPDLGGKEADDSRLVMEFDDQATVEINSSGCYSTVCVELDVQNLAV 1859

Query: 1499 NALLKSNQVNEMEGGGLFG--FD-------QDMNSG-PYNNELCGFDETTSSAPAFRVVK 1548
            N +L+S+ VN+MEG    G  FD       ++M +G    +    +DETT     FR++K
Sbjct: 1860 NTILQSHHVNDMEGADSLGVSFDTVPQASLEEMVTGNQATSTPASYDETTLRPSTFRILK 1919

Query: 1549 QLIQRCLTDAVTSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEF 1608
             ++   + +     NV+AD  + H YRW+ SP S LHDP LHR LH +M+K+F  L+AEF
Sbjct: 1920 SMVVGWVKEITQYHNVYADNQVMHFYRWIRSPSSLLHDPALHRTLHNMMKKLFLQLVAEF 1979

Query: 1609 RKLGATIIFANFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLF 1668
            ++LG+++++ANF+++I+ T K  +  A AY + +  ++ ++E+F  + +     W  LL+
Sbjct: 1980 KRLGSSVVYANFNRIILCTKKRRIEDAIAYVEYITNSIHSKEIFHSLTISFSRCWEFLLW 2039

Query: 1669 MDQYNYGGIPARADESL-------------------------------------DDDSQV 1691
            MD  NYGGI  +    +                                     + D + 
Sbjct: 2040 MDPSNYGGIKGKVSSRVHCGQPDCARAGGATYAQEGETVEDDEEDDSHEEDGVEESDVED 2099

Query: 1692 DIVSSWNIAEYLPK--EIQDHFVLVVSEFMYIPWKHAQK------LAASRASLQEGSSCT 1743
             + ++WNI ++LP+    Q +F+++VS ++   + H+ K         S    + GSS  
Sbjct: 2100 LLENNWNIVQFLPQAASCQSYFLMIVSAYIVAVY-HSMKDELRRTAPGSTPVKRRGSSQF 2158

Query: 1744 PSITVAAAENFESHIV---QYVKGEIS-SYFTGKLLSIVRDAIHHMKKMNNDQHNSPGVM 1799
               T  AA      I     YV  E++ S+FT  +   ++  +   +         P  +
Sbjct: 2159 SQDTEGAAGALPGMITFSQDYVANELTQSFFT--ITQKIQKKVTGSRNSTEPSDMFP--L 2214

Query: 1800 QTAANIHKVDAPLEFIKHVCAAFALDQNVQHDVLVMRKNLLKYVRVREFAPEAEFRDPCP 1859
               +++   +  LEFIK VC   +LD NV + V  + ++LL+ V V EF+ EA+FRDPC 
Sbjct: 2215 LPGSHLLLNNPALEFIKCVCKVLSLDTNVTNQVNKLNRDLLRLVDVGEFSEEAQFRDPCR 2274

Query: 1860 SFILPNVICSYCNDCRDLDLCRDM------ALLAQDWHCAMPQCGQPYDREVMENALLQI 1913
            S++LP VIC  CN CRDLDLC+D       A+L Q W C+   C   YD   +E AL++ 
Sbjct: 2275 SYVLPEVICRSCNFCRDLDLCKDSSFSQDGAVLPQ-WLCS--NCQVAYDSSAIEMALVEA 2331

Query: 1914 VRQRERLYHLQDLVCIRCNQVKAAHLAEQCACAGSFRCKEDASDFRSKMQIFLNIANRQG 1973
            ++++   + LQDL+C++C  VK AH+   C+CAG F        F  ++ IF NIA    
Sbjct: 2332 LQRKLMAFTLQDLICLKCRGVKEAHMPVYCSCAGDFALTIRTQVFTEQIGIFQNIAQHYN 2391

Query: 1974 FQLLQECTSWILE 1986
               L+E   W++E
Sbjct: 2392 MSYLKETLEWLME 2404


>gi|395840160|ref|XP_003792933.1| PREDICTED: DNA polymerase epsilon catalytic subunit A isoform 1
            [Otolemur garnettii]
          Length = 2284

 Score = 1420 bits (3676), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 730/1442 (50%), Positives = 981/1442 (68%), Gaps = 74/1442 (5%)

Query: 8    RQDGRRTKKQKLIRSAEEELEAKL----GYDLFSEGDKRLGWLLTFASSSLEDEDTRKVY 63
            R DG  +    L R    +   K+    G++   E  ++ GWL+    + + DED R + 
Sbjct: 21   RDDGPSSSASVLKRLERSQWTDKMDLLFGFERLKEPGEKTGWLINMHPTEVLDEDKRLI- 79

Query: 64   SCIDLYFVSQDGSTFKSKYKFRPYFYAATKEKMEMDVEAYLRRRYESQIADIEILEKEDL 123
            S +D YF+  DGS FK    ++PYFY AT++  E +V ++L ++++ +IA +E + KEDL
Sbjct: 80   SAVDYYFIQDDGSRFKVALPYKPYFYIATRKGCEREVSSFLSKKFQGKIAKVETVPKEDL 139

Query: 124  DLKNHLSGLHKSYLKISFDTVQQLMDVKKDLLHVVERNQAKFDAAEAYESILTG------ 177
            DL NHL GL ++Y+K+SF TV+ L+ V+K++   V++NQ +  A++AY ++L+       
Sbjct: 140  DLPNHLVGLKRNYVKLSFHTVEDLVKVRKEISPAVKKNQEQDHASDAYTAMLSSVLQRGS 199

Query: 178  ------KREQRPQDFLDCIVDLREYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLLE--K 229
                  +  ++  D LD I+D+REYDVPYHIR +ID  +    WY+V        +E  +
Sbjct: 200  VITDEEETSKKIADQLDNIMDMREYDVPYHIRLSIDLKIHVAHWYNVRHRGNAFPVEITR 259

Query: 230  RVDLLQRAEVHVCAFDIETTKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIED 289
            R DL++R +  V AFDIETTKLPLKFPD + D IMMISYM+DGQGYLI NRE V EDIED
Sbjct: 260  RDDLVERPDPVVLAFDIETTKLPLKFPDPETDQIMMISYMIDGQGYLITNREIVSEDIED 319

Query: 290  LEYTPKPEFEGYFKVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHH 349
             E+TPKPE+EG F V N  +E+ L++ WF H+QE KP I VTYNGD+FDWPF+E RAA H
Sbjct: 320  FEFTPKPEYEGPFCVFNEPDEVHLIQRWFEHVQETKPTIMVTYNGDFFDWPFVEARAAVH 379

Query: 350  GFKMSEELGFQCDKNQGECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLE 409
            G  M +E+GFQ D +QGE +A    H+DC  WVKRDSYLP GS  LKA  KAKLGYDP+E
Sbjct: 380  GISMHQEIGFQKD-SQGEYKAPSCIHMDCLRWVKRDSYLPVGSHNLKAAAKAKLGYDPVE 438

Query: 410  VNPEDMVRFAKEKPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSG 469
            ++PEDM R A E+PQ +A+YSVSDAVATYYLYM YVHPFIF+L TIIPM PDEVLRKGSG
Sbjct: 439  LDPEDMCRMATEQPQTLATYSVSDAVATYYLYMKYVHPFIFALCTIIPMEPDEVLRKGSG 498

Query: 470  TLCEMLLMVQAYKANVICPNKHQSDPEKFYRN-HLLESETYIGGHVECLESGVFRSDLPT 528
            TLCE LLMVQA+ AN+I PNK + +  K   + H+L++ETY+GGHVE LESGVFRSD+P 
Sbjct: 499  TLCEALLMVQAFHANIIFPNKQEQELNKLTADGHVLDAETYVGGHVEALESGVFRSDIPC 558

Query: 529  SFKLDPSAYEQLLNNLDRDLQYAIKVEGKMDLESVSNYDEVKNAIMEKLLRLQEEPIREE 588
             F+++P+A++ LL  +++ +++A++ E K+ +E V+N+ EV + I  KL  L++ P R E
Sbjct: 559  RFRMNPTAFDFLLQQVEKTMRHAVEEEEKVPVEQVTNFQEVCDQIKTKLTSLKDVPNRIE 618

Query: 589  CPLIYHLDVAAMYPNIILTNRLQPPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEIFMG 648
            CPLIYHLDV AMYPNIILTNRLQP +IV +  C ACDFN+PG  C RK+ W WRGE    
Sbjct: 619  CPLIYHLDVGAMYPNIILTNRLQPSAIVDEATCAACDFNKPGANCQRKMAWQWRGEFMPA 678

Query: 649  KRSDYYHLKKQIESE-----FVDGTNGHLSKSFLDLPKMEQQSRLKDRLKKYCQKAYKRV 703
             RS+Y+ ++ Q+ESE     F +G     +++F +L + EQ    K RL  YC+KAYKR+
Sbjct: 679  SRSEYHRIQHQLESEKFPSLFPEGP----ARAFHELSREEQAKYEKKRLADYCRKAYKRI 734

Query: 704  LDKPVTELREAGICMRENSFYVDTVRSFRDRRYEYKGLNKVWKGKLSEAKASGNSIKIQE 763
                V E R   IC RENSFYVDTVR+FRDRRYE+KGL+KVWK KLS A  +G++ +++ 
Sbjct: 735  HITKV-EDRLTTICQRENSFYVDTVRAFRDRRYEFKGLHKVWKKKLSAAMEAGDAAELKR 793

Query: 764  AQDMVVLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKI 823
             ++M VLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAG+V +TGA II  AR LIE+I
Sbjct: 794  CKNMEVLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGIVCFTGANIITQARELIEQI 853

Query: 824  GKPLELDTDGIWCVLPGSFPENFTFKTKDLKK-KLTISYPCVMLNVDVARNNTNDQYQTL 882
            G+PLELDTDGIWCVLP SFPENF  KT + KK ++TISYP  MLN+ V    TNDQYQ L
Sbjct: 854  GRPLELDTDGIWCVLPNSFPENFVLKTTNAKKPRVTISYPGAMLNILVKEGFTNDQYQEL 913

Query: 883  VDPVSKTYETHSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEI 942
             +P S TY T SE SI FEVDGPY AMILPASKEEG  +KKRYAVFN+DG+LAELKGFE+
Sbjct: 914  AEPSSLTYVTRSENSIFFEVDGPYLAMILPASKEEGKKLKKRYAVFNEDGSLAELKGFEV 973

Query: 943  KRRGELKLIKVFQAELFDKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYI 1002
            KRRGEL+LIK+FQ+ +F+ FL GST+EE YS+VA VA+ WLD+L ++  ++ DSEL + I
Sbjct: 974  KRRGELQLIKIFQSSVFEAFLKGSTLEEVYSSVAKVADYWLDVLYSKAANMPDSELFELI 1033

Query: 1003 SESSTMSKSLADYGEQKSCAVTTARRLSDFLGDTMVKDKGLRCQYIVACEPQGTPVSERA 1062
            SE+ +MS+ L DYGEQKS +++TA+RL++FLGD MVKD GL C+YI++  P+G+PV+ERA
Sbjct: 1034 SENRSMSRKLEDYGEQKSTSISTAKRLAEFLGDQMVKDAGLSCRYIISRRPEGSPVTERA 1093

Query: 1063 VPVAIFETDAEIMKFYLRKWCKTSS--DVGIRSIVDWSYYKQRLSSAIQKIITIPAAMQK 1120
            +P+AIF+ +  + K +LRKW K+SS  D  IR+I+DW YY +RL SAIQKIITIPAA+Q+
Sbjct: 1094 IPLAIFQAEPTVRKHFLRKWLKSSSLQDFDIRTILDWDYYIERLGSAIQKIITIPAALQQ 1153

Query: 1121 VSNPVPRVVHPDWLYKKVREKEDKFRQRKLVDIFSSLKKDDFLNKTCNAETNLMDENVED 1180
            V NPVPRV HPDWL++K+ EK D ++Q+K+ ++F    +   +     A        + D
Sbjct: 1154 VKNPVPRVKHPDWLHRKLLEKNDIYKQKKISELFILEGRRQVM--MAQAPEGSARPGIAD 1211

Query: 1181 LEDFPKKRRNSVNGPRPIVRCFEVNNEQKTVKTTDQVDS--LRQQLEPSEVSDQQPSSQN 1238
            +EDF          P P +    +  ++K V    Q DS  L   +   E+  Q P    
Sbjct: 1212 MEDF-----GLTQPPHPPL---PIATKRKRVLWESQEDSQDLALTVPWQEILGQPP---- 1259

Query: 1239 AIDTENIDRIVDYKGWLELKKRKW----KDNLDRRKKQKLGSLRASHQANGVSESLGDMI 1294
            A+ T   + +V    WL   K+KW    +    RRK+Q L             E  GDM 
Sbjct: 1260 ALGTTQAEWLV----WLGFHKKKWQLQARQRHTRRKRQHL-------------ELAGDMP 1302

Query: 1295 NHKEAQ--RRTGVGSYFRRQETAMTRCHWQIIQLVPSSQSGVFLAWVVVEGIMVRIPITV 1352
                 +     G+GS+ RR   ++    WQI+Q+  +SQ+G+F  W ++   +  I +++
Sbjct: 1303 RPGALRDGPAAGLGSFLRRTARSILDLPWQIVQISETSQAGLFRLWAIIGSDLHCIKLSI 1362

Query: 1353 PRLFYLNSKDPIVEKFPG-RRVNKTLPHGRRSFNLIEVMIDEDQFRKESKKLAALLADPE 1411
            PR+F++N +    E+ P  R+VN+ LP     +NL E  + ED +++   ++   L+ P+
Sbjct: 1363 PRVFFVNQRVAKAEEGPSYRKVNRVLPRSNTVYNLYEYSVPEDMYQEHINEINTELSAPD 1422

Query: 1412 VE 1413
            +E
Sbjct: 1423 IE 1424



 Score =  317 bits (813), Expect = 3e-83,   Method: Compositional matrix adjust.
 Identities = 186/605 (30%), Positives = 307/605 (50%), Gaps = 64/605 (10%)

Query: 1442 LARYAHILWISDDGVPDLGGTSEEDECFADEVHQPVLT---YPGAYRKVSVELKIHHLSV 1498
            L R+ H+LW+S    PDLGG   +D     E  +  +      G Y  V VEL + +L+V
Sbjct: 1677 LQRHNHLLWLSPTARPDLGGKEADDSRLVMEFDEQAIVEINSSGCYSTVCVELDLQNLAV 1736

Query: 1499 NALLKSNQVNEMEGGGLFGFDQD----------MNSGPYNNELCGFDETTSSAPAFRVVK 1548
            N +L+S+ VN+MEG    G   D          +  G   +    +DET   +  FR++K
Sbjct: 1737 NTILQSHHVNDMEGADSMGISFDVIQQASLEDMITGGQATSTPASYDETALCSNTFRILK 1796

Query: 1549 QLIQRCLTDAVTSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEF 1608
             ++   + +     N++AD  + H YRWL SP S L+DP LHR LH +M+K+F  L+AEF
Sbjct: 1797 SMVVGWVKEITQYHNIYADNQVMHFYRWLRSPSSLLYDPALHRTLHNMMKKLFLQLIAEF 1856

Query: 1609 RKLGATIIFANFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLF 1668
            ++LG+++I+ANF+++I+ T K  +  A AY + +  ++ ++E+F  + +     W  LL+
Sbjct: 1857 KRLGSSVIYANFNRIILCTKKRRIEDAMAYVEYITSSIHSKEIFHSLTISFSRCWEFLLW 1916

Query: 1669 MDQYNYGGIPARADESL----------------------DDDSQVDI-----------VS 1695
            MD  NYGGI  +   S+                      DD  + D+            +
Sbjct: 1917 MDPSNYGGIKGKVSPSVHFWQQETQKAEGTAGKESEEEEDDIGEPDVEQPEPDVEELLEN 1976

Query: 1696 SWNIAEYLPK--EIQDHFVLVVSEFMYIPWKHAQKLAASRAS-----LQEGSSCTPSITV 1748
            +WNI ++LP+    Q +F+++VS ++   + H+ K    R++     ++  S+   S   
Sbjct: 1977 NWNILQFLPQAASCQSYFLMIVSAYIVAVY-HSMKEGLRRSAPGSTPMKRRSASQLSQET 2035

Query: 1749 AAAENFESHIVQYVKGEISSYFTGKLLSIVRDAIHHMKKMNNDQHNSPGVMQTAANIHKV 1808
                     ++ + +  +++  T    +I +     +    N    S        +   +
Sbjct: 2036 EGTAGALPGMITFSQDYVANELTQSFFTITQKIQKKVTGSRNSTELSEMFPHLPGSHLLL 2095

Query: 1809 DAP-LEFIKHVCAAFALDQNVQHDVLVMRKNLLKYVRVREFAPEAEFRDPCPSFILPNVI 1867
            + P LEFIK+VC   +LD N+ + V  + ++LL+ V V EF+ EA+FRDPC S++LP VI
Sbjct: 2096 NNPALEFIKYVCKVLSLDTNITNQVNKLNRDLLRLVDVGEFSEEAKFRDPCRSYVLPEVI 2155

Query: 1868 CSYCNDCRDLDLCRDM------ALLAQDWHCAMPQCGQPYDREVMENALLQIVRQRERLY 1921
            C  CN CRDLDLC+D       A+L Q W C+   C   YD   +E AL++ ++++   +
Sbjct: 2156 CHSCNFCRDLDLCKDSSFSQDGAILPQ-WLCS--NCQAAYDLSTIEMALVEALQKKLMAF 2212

Query: 1922 HLQDLVCIRCNQVKAAHLAEQCACAGSFRCKEDASDFRSKMQIFLNIANRQGFQLLQECT 1981
             LQDL+C++C+ VK  ++   C CAG+F        F  ++ IF NIA   G   L E  
Sbjct: 2213 TLQDLICLKCHGVKETNMPVHCGCAGAFTPTIHTQVFMEQIGIFRNIAQLYGMSYLLETL 2272

Query: 1982 SWILE 1986
             W+L+
Sbjct: 2273 DWLLQ 2277


>gi|395513503|ref|XP_003760963.1| PREDICTED: DNA polymerase epsilon catalytic subunit A [Sarcophilus
            harrisii]
          Length = 2288

 Score = 1418 bits (3671), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 717/1437 (49%), Positives = 981/1437 (68%), Gaps = 63/1437 (4%)

Query: 8    RQDGRRTKKQKLIRSAE-----EELEAKLGYDLFSEGDKRLGWLLTFASSSLEDEDTRKV 62
            R DG  +     ++  E     ++++A+ G++   E +++ GWL+    + + DED R V
Sbjct: 21   RDDGSSSTSLSALKRLERSQWTDKMDARFGFERLQEPEEKTGWLINMHPTEILDEDKRLV 80

Query: 63   YSCIDLYFVSQDGSTFKSKYKFRPYFYAATKEKMEMDVEAYLRRRYESQIADIEILEKED 122
             S +D YF+  DGS FK    ++PYFY AT++  E +V ++L ++++ +IA +E + KED
Sbjct: 81   -SAVDYYFIQDDGSRFKVALTYKPYFYIATRKGCEREVSSFLSKKFQGKIAKLETVPKED 139

Query: 123  LDLKNHLSGLHKSYLKISFDTVQQLMDVKKDLLHVVERNQAKFDAAEAYESILTGK---- 178
            LDL NHL GL ++Y+K+SF+TV  L+ V+K++   V++N+ + + ++ Y ++L+      
Sbjct: 140  LDLSNHLVGLKRNYIKLSFNTVDDLVKVRKEISPAVKKNRERDNTSDTYTAMLSSALMGG 199

Query: 179  --------REQRPQDFLDCIVDLREYDVPYHIRFAIDNDVRCGQWYDVSI-SSTGPL-LE 228
                      ++  D LD +VD+REYDVPYHIR +ID  +    WY+V    S+ P+ + 
Sbjct: 200  SVTTDEEGASKKIADQLDNVVDMREYDVPYHIRLSIDLKIHVAHWYNVRYRGSSLPIEIT 259

Query: 229  KRVDLLQRAEVHVCAFDIETTKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIE 288
            +R DL++R +  V AFDIETTKLPLKFPDA+ D IMMISYM+DGQGYLI NRE V EDIE
Sbjct: 260  RRDDLVERPDPVVLAFDIETTKLPLKFPDAETDQIMMISYMVDGQGYLITNREIVSEDIE 319

Query: 289  DLEYTPKPEFEGYFKVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAH 348
            D E+TPKPE+EG F V N  +E  L++ WF H+QE KP I VTYNGD+FDWPF+E RAA 
Sbjct: 320  DFEFTPKPEYEGPFCVFNEPDEAHLIQRWFEHVQETKPTIMVTYNGDFFDWPFVEARAAV 379

Query: 349  HGFKMSEELGFQCDKNQGECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPL 408
            HG  M +E+GFQ D +QGE ++    H+DC  WVKRDSYLP GS  LKA  KAKLGYDP+
Sbjct: 380  HGLSMHQEIGFQKD-SQGEYKSSQCIHMDCLRWVKRDSYLPVGSHNLKAAAKAKLGYDPV 438

Query: 409  EVNPEDMVRFAKEKPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGS 468
            E++PEDM R A E+PQ +A+YSVSDAVATYY+YM YVHPFIF+L TIIPM PDEVLRKGS
Sbjct: 439  ELDPEDMCRMATEEPQTLATYSVSDAVATYYMYMKYVHPFIFALCTIIPMEPDEVLRKGS 498

Query: 469  GTLCEMLLMVQAYKANVICPNKHQSDPEKFYRN-HLLESETYIGGHVECLESGVFRSDLP 527
            GTLCE LLMVQA+ AN++ PNK + +  K   + H+L+SETY+GGHVE LESGVFRSD+P
Sbjct: 499  GTLCEALLMVQAFHANIVFPNKQEQEFNKLTEDGHVLDSETYVGGHVEALESGVFRSDIP 558

Query: 528  TSFKLDPSAYEQLLNNLDRDLQYAIKVEGKMDLESVSNYDEVKNAIMEKLLRLQEEPIRE 587
              FK++P+A++ LL  +++ +++AI+ E  + ++ V+N+ EV + I  KL  L++ P R 
Sbjct: 559  CRFKMNPAAFDFLLQRVEKTMRHAIEEEENVPIDQVTNFQEVCDEIKNKLTSLKDVPNRI 618

Query: 588  ECPLIYHLDVAAMYPNIILTNRLQPPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEIFM 647
            ECPLIYHLDV AMYPNIILTNRLQP +IV +  C ACDFN+PG  C R++ W WRGE   
Sbjct: 619  ECPLIYHLDVGAMYPNIILTNRLQPSAIVNEATCAACDFNKPGANCQRRMTWQWRGEFMP 678

Query: 648  GKRSDYYHLKKQIESE-FVDGTNGHLSKSFLDLPKMEQQSRLKDRLKKYCQKAYKRVLDK 706
              RS+Y+ +++Q+ESE F        +++F +L + EQ    K RL  YC+KAYK++   
Sbjct: 679  ASRSEYHRIQQQLESEKFPPLFPDKPARAFHELSREEQAKYEKKRLADYCRKAYKKIHIT 738

Query: 707  PVTELREAGICMRENSFYVDTVRSFRDRRYEYKGLNKVWKGKLSEAKASGNSIKIQEAQD 766
             V E R   IC RENSFYVDTVR+FRDRRYE+KGL+KVWK KLS A   G++ +++  ++
Sbjct: 739  KVEE-RLTTICQRENSFYVDTVRAFRDRRYEFKGLHKVWKKKLSAAMEMGDAAEVKRCKN 797

Query: 767  MVVLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKP 826
            M +LYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAG+V +TGA II  AR LIE+IG+P
Sbjct: 798  MEILYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGIVCFTGANIITQARELIEQIGRP 857

Query: 827  LELDTDGIWCVLPGSFPENFTFKTKDLKK-KLTISYPCVMLNVDVARNNTNDQYQTLVDP 885
            LELDTDGIWCVLP SFPENF  K+ + KK K+TISYP  MLN+ V    TNDQYQ L +P
Sbjct: 858  LELDTDGIWCVLPNSFPENFVIKSTNAKKPKVTISYPGAMLNIMVKEGFTNDQYQELTEP 917

Query: 886  VSKTYETHSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRR 945
             S TY T SE SI FEVDGPY AMILPASKEEG  +KKRYAVFN+DG+LAELKGFE+KRR
Sbjct: 918  TSLTYITRSENSIFFEVDGPYLAMILPASKEEGKKLKKRYAVFNEDGSLAELKGFEVKRR 977

Query: 946  GELKLIKVFQAELFDKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISES 1005
            GEL+LIK+FQ+ +F+ FL G+T+EE Y +VA VA+ WLD+L ++  ++ DSEL + ISE+
Sbjct: 978  GELQLIKIFQSSVFEAFLKGNTLEEVYGSVAKVADYWLDVLYSRAANMPDSELFELISEN 1037

Query: 1006 STMSKSLADYGEQKSCAVTTARRLSDFLGDTMVKDKGLRCQYIVACEPQGTPVSERAVPV 1065
             +MS+ L DYGEQKS +++TA+RL++FLGD MVKD GL C++I++ +P+G+PV+ERA+P+
Sbjct: 1038 RSMSRKLEDYGEQKSTSISTAKRLAEFLGDQMVKDAGLSCRFIISRKPEGSPVTERAIPL 1097

Query: 1066 AIFETDAEIMKFYLRKWCKTSS--DVGIRSIVDWSYYKQRLSSAIQKIITIPAAMQKVSN 1123
            AIF+ +  + K +LRKW K+SS  D  IR+I+DW YY +RL SAIQKIITIPAA+Q+V N
Sbjct: 1098 AIFQAEPTVRKHFLRKWLKSSSLQDFDIRTILDWDYYIERLGSAIQKIITIPAALQQVKN 1157

Query: 1124 PVPRVVHPDWLYKKVREKEDKFRQRKLVDIF-SSLKKDDFLNKTCNAETNLMDENVEDLE 1182
            PVPRV HPDWL+KK+ EK D ++Q+K+ ++F    K+   +N+            + D+E
Sbjct: 1158 PVPRVRHPDWLHKKLMEKHDIYKQKKISELFIHEGKRQVTINQHPEGSQG---HGILDME 1214

Query: 1183 DFPKKRRNSVNGPRPIVRCFEVNNEQKTVKTTDQVDSLRQQLEPS--EVSDQQPSSQNAI 1240
            D        +   +P+     +  ++K V    Q +S   +L  S  E+  Q PS    +
Sbjct: 1215 D--------LGVTKPLQPAVPIATKRKRVPIESQEESQNLELTQSWREILGQPPS----L 1262

Query: 1241 DTENIDRIVDYKGWLELKKRKWKDNLDRRKKQKLGSLRASHQANGVSESLGDMINHKEAQ 1300
             T   + +V    WL   K+KW          +L + +   +         D +      
Sbjct: 1263 GTTKEEWLV----WLSFHKKKW----------ELQARQRQERRKKRRVETKDRVLSSGVI 1308

Query: 1301 R---RTGVGSYFRRQETAMTRCHWQIIQLVPSSQSGVFLAWVVVEGIMVRIPITVPRLFY 1357
            R    TG+G + RR   ++    WQI+Q+  +SQ G+F  W V+   +  I + +PR+FY
Sbjct: 1309 RDGPTTGLGHFLRRTARSILDLPWQIVQISETSQPGLFRLWAVIGNDLHCIKLNIPRVFY 1368

Query: 1358 LNSKDPIVEKFPG-RRVNKTLPHGRRSFNLIEVMIDEDQFRKESKKLAALLADPEVE 1413
            +N + P  E     R+VN+ LP     +NL E  + ED +++   ++ A L+ P++E
Sbjct: 1369 VNQRVPKEEDGSSFRKVNRVLPRSNMVYNLYEYSVPEDMYQEHINEINADLSAPDIE 1425



 Score =  310 bits (795), Expect = 5e-81,   Method: Compositional matrix adjust.
 Identities = 190/615 (30%), Positives = 313/615 (50%), Gaps = 79/615 (12%)

Query: 1442 LARYAHILWISDDGVPDLGGTSEEDECFA---DEVHQPVLTYPGAYRKVSVELKIHHLSV 1498
            L  + H+LW S    PDLGG   +D       D+     +  PG Y  V +EL I +L+V
Sbjct: 1678 LRHHNHLLWFSPTSRPDLGGKEADDNRLVMEFDDQASVEINNPGCYSTVCLELDIQNLAV 1737

Query: 1499 NALLKSNQVNEMEGGGLFG--FD-------QDMNSG-PYNNELCGFDETTSSAPAFRVVK 1548
            N +L+S+ VN+MEG    G  FD       ++M +G    N    +DET   +  FR++K
Sbjct: 1738 NTILQSHHVNDMEGASSMGISFDVIQQASLEEMVTGNQAANIPASYDETALCSNTFRILK 1797

Query: 1549 QLIQRCLTDAVTSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEF 1608
             ++   + +     NV+AD  + H YRWL SP S L+DP LHR L  +M+K+F  L+AEF
Sbjct: 1798 SMVVGWVKEITQYHNVYADNQVMHFYRWLRSPSSLLYDPALHRTLLSMMKKLFLQLVAEF 1857

Query: 1609 RKLGATIIFANFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLF 1668
            ++LG+++I+ANF+++I+ T K  +  A AY D +  ++ ++E+F  + +     W  LL+
Sbjct: 1858 KRLGSSVIYANFNRIILCTKKRRIEDAIAYIDYITNSIHSKEIFHSLTISFSRCWEFLLW 1917

Query: 1669 MDQYNYGGIPARADESL---DDDSQVD--------------------------------- 1692
            MD  NYGGI  +    +   + ++Q +                                 
Sbjct: 1918 MDPANYGGIKGKVPSHVHYGEQNTQKEQTAEKEQESEEEEEEEEEEAEEEMIEESNVEDL 1977

Query: 1693 IVSSWNIAEYLPK--EIQDHFVLVVSEFMYIPWKHAQKLAASRASLQEGSSCTP------ 1744
            + ++WNI ++LP+    Q +F++++S ++   + H+ K    R++      CTP      
Sbjct: 1978 LDNNWNIVQFLPQAASCQSYFLMIISAYIVAVY-HSMKEELRRSA----PGCTPVKRRGN 2032

Query: 1745 ---SITVAAAENFESHIVQYVKGEISSYFTGKLLSIVRDAIHHMKKMNNDQHNSPGVM-- 1799
               S            ++ + +  +++  T    +I +      K M +     P  M  
Sbjct: 2033 SQLSQEADGVAGALPGMITFSQDYVANELTQNFFTITQKI--QKKVMGSRNSTEPSEMFP 2090

Query: 1800 -QTAANIHKVDAPLEFIKHVCAAFALDQNVQHDVLVMRKNLLKYVRVREFAPEAEFRDPC 1858
                +++   +  LEFIK+VC   +LD N+ + V  + ++LL+ V V EF+ EA+FRDPC
Sbjct: 2091 VLPGSHLLLNNPALEFIKYVCKVLSLDTNITNQVNKLNRDLLRLVDVGEFSEEAQFRDPC 2150

Query: 1859 PSFILPNVICSYCNDCRDLDLCRDMALLAQD------WHCAMPQCGQPYDREVMENALLQ 1912
             S++LP VIC  CN CRDLDLC+D + L+QD      W C  P C   YD   +E AL++
Sbjct: 2151 RSYVLPEVICRNCNFCRDLDLCKDPS-LSQDTSILPQWLC--PNCQTAYDTAHIEMALVE 2207

Query: 1913 IVRQRERLYHLQDLVCIRCNQVKAAHLAEQCACAGSFRCKEDASDFRSKMQIFLNIANRQ 1972
            +++++   + LQDL+C++C  VK A++   C+CAG F        F  ++ IF +IA   
Sbjct: 2208 VLQKKLMAFTLQDLICLKCKGVKEANMPIYCSCAGDFALTIQTKVFVEQIGIFRSIARHY 2267

Query: 1973 GFQLLQECTSWILEV 1987
            G   L E   W+L++
Sbjct: 2268 GMTYLTEMIEWLLQM 2282


>gi|384483891|gb|EIE76071.1| hypothetical protein RO3G_00775 [Rhizopus delemar RA 99-880]
          Length = 2170

 Score = 1417 bits (3668), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 722/1422 (50%), Positives = 953/1422 (67%), Gaps = 76/1422 (5%)

Query: 24   EEELEAKLGYDLFSEGDKRLGWLLTFASSSLEDEDTRKVYSCIDLYFVSQDGSTFKSKYK 83
            E+E++ + G++ + EG +RLGWLL    + ++D +     S +D YF   +G TFK+   
Sbjct: 48   EDEIQLRFGFERYEEGPERLGWLLNMNQTLIKDSEWPGGRSAVDFYFRDDNGETFKATKS 107

Query: 84   FRPYFYAATKEKMEMDVEAYLRRRYESQIADIEILEKEDLDLKNHLSGLHKSYLKISFDT 143
            + PY++   K   E +VE YL RR+E  I   + ++KEDL   NHL G  ++++++ F  
Sbjct: 108  YSPYYFIRCKPGTEGEVEDYLHRRFEGLIEKFKRVKKEDLKQPNHLVGHTRTFIQLLFRN 167

Query: 144  VQQLMDVKKDLLHVVERNQAKFDAAEAYESIL----------------TGKREQRPQDFL 187
             + LM V++ LL VVE+N+AK DA + Y  ++                T +R   P + L
Sbjct: 168  TKDLMTVRRVLLPVVEKNKAKRDAVDTYAEMVNTTNGIKYNHTNSNRTTARRN--PDETL 225

Query: 188  DCIVDLREYDVPYHIRFAIDNDVRCGQWYDVSISSTGPL-LEKRVDLLQRAEVHVCAFDI 246
            + ++D+REYD+P+HIR AID D+R G WY V       + L  R DL+ R E  + AFDI
Sbjct: 226  ENVIDIREYDIPFHIRMAIDLDIRVGLWYTVKAQDDNTVELIHRKDLVHRPEPVILAFDI 285

Query: 247  ETTKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTN 306
            ETTKLPLKFPD   D IMMISYM+DG+GYLI NRE V +DIED EYTPKPEFEG F + N
Sbjct: 286  ETTKLPLKFPDVTIDQIMMISYMIDGRGYLITNREIVSQDIEDFEYTPKPEFEGPFTIFN 345

Query: 307  VNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDKNQG 366
             +NE  +LR +F H+Q  KP I+VTYNGD+FDWPF+E RA  HG  M  E+G   D ++ 
Sbjct: 346  EDNEEGVLRRFFEHVQRAKPNIFVTYNGDFFDWPFVEGRAKVHGIDMFHEIGVYKD-DED 404

Query: 367  ECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQMM 426
            E + K A H+D F WV+RDSYLP GSQGLKAVT  KLGY+PLE++PEDM RFA E+PQ++
Sbjct: 405  EYKCKHASHMDAFRWVQRDSYLPNGSQGLKAVTTIKLGYNPLELDPEDMTRFASEQPQVL 464

Query: 427  ASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVI 486
            A YSVSDAVATYYLYM YVHPFIFSL  IIP+ PDEVLRKG+GTLCE LLMV+AY+ NVI
Sbjct: 465  AQYSVSDAVATYYLYMKYVHPFIFSLCNIIPLVPDEVLRKGTGTLCEQLLMVEAYRVNVI 524

Query: 487  CPNKHQSDPEKFYRNHLLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQLLNNLDR 546
             PNKH  D   FY  HLLESETY+GGHVE LE+GVFRSD+ + FKLDPSA ++L++ LD 
Sbjct: 525  IPNKHMDDAHSFYEGHLLESETYVGGHVEALEAGVFRSDINSDFKLDPSAAQELIDQLDH 584

Query: 547  DLQYAIKVEGKMDLESVSNYDEVKNAIMEKLLRLQEEPIREECPLIYHLDVAAMYPNIIL 606
             L++ I+VE K  +E ++NY+EVK AI++KL  L+++PIR+E PLIYHLDVAAMYPNIIL
Sbjct: 585  ALKFTIEVEEKKKMEDIANYEEVKQAIVQKLEALRDKPIRQEPPLIYHLDVAAMYPNIIL 644

Query: 607  TNRLQPPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYYHLKKQIESE-FV 665
            TNRLQP +++ + +C  CDFN PGKTC R+++W+WRGE    +R +Y  ++ Q+ +E F 
Sbjct: 645  TNRLQPDAMIDEAMCATCDFNVPGKTCDRRMKWLWRGEYIPAERDEYRMIENQLTTETFP 704

Query: 666  DGTNGHLSKSFLDLPKMEQQSRLKDRLKKYCQKAYKRVLDKPVTELREAGICMRENSFYV 725
                    +++  L + E+ + L+ RLK Y +KA+ +  +  V E RE+ IC REN FY+
Sbjct: 705  PKYANQQRRTWFSLSEQEKATLLRARLKDYSKKAHSKQKETKVVE-RESIICQRENPFYI 763

Query: 726  DTVRSFRDRRYEYKGLNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHKCILNSF 785
            +TVR+FRDRRYEYKGL+K WKGKL EA   G+  KI EA++M+VL+DSLQLAHKCILNSF
Sbjct: 764  ETVRAFRDRRYEYKGLHKTWKGKLDEAIKDGSVTKIGEAKNMIVLFDSLQLAHKCILNSF 823

Query: 786  YGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLPGSFPEN 845
            YGYVMR GARW+S+EMAG+V  TG+ IIQ AR L+E++G+PLELDTDGIWC+LP SFPE 
Sbjct: 824  YGYVMRPGARWHSLEMAGIVCLTGSNIIQMARKLVERLGRPLELDTDGIWCILPKSFPET 883

Query: 846  FTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEFEVDGP 905
            FTF  K+  K L I YPC MLN  V    TN QYQ LV+P +  Y    E SI FE+DGP
Sbjct: 884  FTFSLKN-GKSLRIYYPCTMLNHLVHAQYTNKQYQRLVNPETFEYSVSEENSIFFEIDGP 942

Query: 906  YKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFLHG 965
            Y+AMILP+S EE  L+KKRYAVF+ DG+LAELKGFE+KRRGELKLIK+FQ E+F  FL G
Sbjct: 943  YRAMILPSSTEEDKLLKKRYAVFDMDGSLAELKGFEVKRRGELKLIKIFQTEIFAVFLEG 1002

Query: 966  STIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLADYGEQKSCAVTT 1025
             T+EECYSAVA VA+RWLD+L ++  +I+D EL + I+E+ +MSKSLA YG QKS +++T
Sbjct: 1003 KTLEECYSAVAKVADRWLDVLYSRAVNISDEELFELIAENRSMSKSLAQYGTQKSTSIST 1062

Query: 1026 ARRLSDFLGDTMVKDKGLRCQYIVACEPQGTPVSERAVPVAIFETDAEIMKFYLRKWCKT 1085
            A+RL++FLGD MVKDKGL C +I++  P G PVSERAVP+AIF+++  + + YLRKW   
Sbjct: 1063 AKRLAEFLGDQMVKDKGLACSFIISARPYGLPVSERAVPIAIFQSEESVKRHYLRKWLGD 1122

Query: 1086 SS--DVGIRSIVDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLYKKVREKED 1143
            +S     IR I+DW YY  R  S IQK+ITIPAAMQKVSNPVPRV HPDWL+K+V  K D
Sbjct: 1123 NSLTTFDIRDILDWEYYLDRFGSVIQKLITIPAAMQKVSNPVPRVRHPDWLFKRVAIKND 1182

Query: 1144 KFRQRKLVDIFSSLKKDDFLNKTCNAETNLMDE--NVEDLEDFPKKRRNSVNGPRPIVRC 1201
              RQ  + DIFS             AE  L++E  +++D+E+       + NG  P    
Sbjct: 1183 PQRQYLITDIFS------------RAEKPLLEESMDIDDIEEL-NVSHTATNGLLP---- 1225

Query: 1202 FEVNNEQKTVKTTDQVDSLRQQLEPSEVSDQQPSSQNAIDTENIDRIVDYKGWLELKKRK 1261
             ++    K  K +D  D+  Q     E+    P      +  NI+   DY  WLE +KRK
Sbjct: 1226 -KIARVTKKRKLSDSTDNPLQIKRSKELRAPLPEEDRPENMPNIEE--DYLAWLEFQKRK 1282

Query: 1262 WKDNLDRRKKQKLGSLRASHQANGVSESLGDMINHKEAQRRTGVGSYFRRQETAMTRCHW 1321
            WK     RK+     +RA ++     E LG  +  + +    GVG YFRRQ  ++    W
Sbjct: 1283 WK-----RKRM----IRAYNR-----EELGSSLATRNSL--NGVGDYFRRQTGSLVNSLW 1326

Query: 1322 QIIQLVPSSQSGVFLAWVVVEGIMVRIPITVPRLFYLN----------SKDPIVEKFPGR 1371
            ++IQ+  +   G    WV+VE  +  I + +PR+FY+N           ++P  E     
Sbjct: 1327 EVIQIAETDIPGECKLWVMVEDQLYSIRLAIPRMFYINCTEDDYNVVKDQNPTCELV--- 1383

Query: 1372 RVNKTLPHGRRSFNLIEVMIDEDQFRKESKKLAALLADPEVE 1413
            R ++TLP    S NL  V + E++F+ E  K A++   P  E
Sbjct: 1384 RCSRTLPRSYTSLNLFRVTMPENEFQVEVAKSASIFNHPSTE 1425



 Score =  216 bits (549), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 154/575 (26%), Positives = 267/575 (46%), Gaps = 77/575 (13%)

Query: 1409 DPEVEVLGWQQNAAKIGMQRCAASSQWFNERISLARYAH--------------------- 1447
            D + + L W Q   K   +         +ER+S ARYA+                     
Sbjct: 1621 DKKFDALNWVQPMLKRVFKYYMELGSLVDERLSQARYANVPFCNIPEDPYVFMSDVIFAR 1680

Query: 1448 -------ILWISDDGVPDLGGTSEEDECFA--DEVHQPVLTYPGAYRKVSVELKIHHLSV 1498
                   I+W S   +PDLGG  EEDE  +    +  P L + GAY  V  +  +  L +
Sbjct: 1681 TMIQNDMIIWWSTTKLPDLGG-REEDETISITGGLVNPELNFQGAYETVCADFDLSRLCL 1739

Query: 1499 NALLKSNQVNEMEG-GGLFGFDQ-----DMNSGPYNNELCGFDETTSSAPAFRVVKQLIQ 1552
            N LL S  +NE+EG  G   FD      D  +         F     S+    +++  + 
Sbjct: 1740 NTLLVSPVINELEGTAGNNSFDNASHTLDEYTKGTVVAASSFGGGMVSSKTLYILRSTVH 1799

Query: 1553 RCLTDAVTSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEFRKLG 1612
            R + ++++ GN   + +     RWL SP S ++DP L+ ++H +M+KVF  L+AE ++LG
Sbjct: 1800 RWMDNSISGGNKIGEHLADTFQRWLMSPDSCMYDPCLYDLIHNLMKKVFMQLIAELKRLG 1859

Query: 1613 ATIIFANFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLFMDQY 1672
            A ++FANF ++++   K    +A +Y + L + +  ++LFE + ++   +W  L++MD+ 
Sbjct: 1860 AKVVFANFHRILVTATKETSESAISYFEYLYRTIDRKQLFEALVMKHRVYWDVLIWMDEK 1919

Query: 1673 NYGGIPARADESLDDDSQVDIVSSWNIAEYLPKEIQDHFVLVVSEFMYIPWKHAQKLAAS 1732
            N+ G+          D    I   WNI  +LP E +  F    S ++Y   ++ +K    
Sbjct: 1920 NFSGVLVGNYV----DGVPAITKQWNIENHLPMEARVKFGHYTSLYLYTMTQYKRKY-PR 1974

Query: 1733 RASLQEGSSCTPSITVAAAENFESHIVQYVKGEISSYFTGKLLSIVRDAIHHMKKMNNDQ 1792
              ++Q+  +  P+      ++   H+ +Y++ +++   +  L      A H  + +N   
Sbjct: 1975 EITVQDMETDEPT-----NDDRSIHLREYIQIDLTRKMSRWLSKYT--ASHSTELINE-- 2025

Query: 1793 HNSPGVMQTAANIHKVDAPLEFIKHVCAAFALDQNVQHDVLVMRKNLLKYVR-VREFAPE 1851
                               +EFIK VC    LD  V+  VL+++++LLK    + +F+ +
Sbjct: 2026 ------------------AVEFIKLVCGVLELDGRVEETVLILKRDLLKATADLSDFSEQ 2067

Query: 1852 AEFRDPCPSFILPNVICSYCNDCRDLDLCRDMALLAQD-----WHCAMPQCGQPYDREVM 1906
            A+F++P  ++ L +V C  CN   DLD  RD  + ++D     W C   QC   YD+  +
Sbjct: 2068 AKFKNPIETYKLVDVCCLNCNHVVDLDFRRDPDMTSEDGQLKAWRCK--QCQSEYDKVFI 2125

Query: 1907 ENALLQIVRQRERLYHLQDLVCIRCNQVKAAHLAE 1941
            E  L+  V++  + Y LQDLVC RC+  + A   E
Sbjct: 2126 EGLLIAKVQEWLKSYQLQDLVCGRCHTEQHASTLE 2160


>gi|190570246|ref|NP_001121995.1| DNA polymerase epsilon catalytic subunit A [Danio rerio]
          Length = 2284

 Score = 1415 bits (3664), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 711/1416 (50%), Positives = 981/1416 (69%), Gaps = 59/1416 (4%)

Query: 25   EELEAKLGYDLFSEGDKRLGWLLTFASSSLEDEDTRKVYSCIDLYFVSQDGSTFKSKYKF 84
            + ++ + G++   E  ++ GWL+    + + D+D R + S +D YF+ +DG+ FK    +
Sbjct: 40   DSMDERFGFERMKEPGEKTGWLINMHPTEILDDDKRMI-SAVDYYFIQEDGNRFKVALPY 98

Query: 85   RPYFYAATKEKMEMDVEAYLRRRYESQIADIEILEKEDLDLKNHLSGLHKSYLKISFDTV 144
            +PYFY ATK+  E +V ++L ++++ ++A +E + KEDLDL NHL GL ++Y+K+SF+TV
Sbjct: 99   KPYFYIATKKNTEREVISFLSKKFQGKVAKLESVPKEDLDLPNHLVGLKRNYIKLSFNTV 158

Query: 145  QQLMDVKKDLLHVVERNQAKFDAAEAYESILT-------------GKREQRPQDFLDCIV 191
              L+ VK+++   V +N+ +  + +AY S+L+             G   ++  + LD I+
Sbjct: 159  DDLIKVKREISPAVRKNREREKSNDAYTSMLSSALVGGSVVTEDEGGSSKKMTEQLDNIL 218

Query: 192  DLREYDVPYHIRFAIDNDVRCGQWYDVSI--SSTGPLLEKRVDLLQRAEVHVCAFDIETT 249
            D+REYDVPYH+R +ID  +    WY+V    S+  P + +R DL++R +  V AFDIETT
Sbjct: 219  DMREYDVPYHVRVSIDLKIHVAHWYNVRYRGSAYPPEIVRRDDLVERPDPVVLAFDIETT 278

Query: 250  KLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNVNN 309
            KLPLKFPDA+ D IMMISYM+DGQG+LI NRE V EDIED E+TPKPE+EG F + N  +
Sbjct: 279  KLPLKFPDAETDQIMMISYMIDGQGFLITNREIVSEDIEDFEFTPKPEYEGPFTIFNEPD 338

Query: 310  EIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDKNQGECR 369
            E  L++ WF H+ E KP I+VTYNGD+FDWPF+E RAA  G  M  E+GFQ D NQGE +
Sbjct: 339  EASLIQRWFEHVHETKPNIFVTYNGDFFDWPFVEARAAQLGLSMHREIGFQKD-NQGEYK 397

Query: 370  AKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQMMASY 429
            A  A H+DC  WVKRDSYLP GS  LKA  KAKLGYDP+E++PE+M R A E+PQ +A+Y
Sbjct: 398  ASQAIHMDCLRWVKRDSYLPVGSHNLKAAAKAKLGYDPVELDPEEMCRMATEEPQTLATY 457

Query: 430  SVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVICPN 489
            SVSDAVATYYLYM YVHPFIF+L TIIPM PDEVLRKGSGTLCE LLMVQAY  N++ PN
Sbjct: 458  SVSDAVATYYLYMKYVHPFIFALCTIIPMEPDEVLRKGSGTLCEALLMVQAYHVNIVFPN 517

Query: 490  KHQSDPEKFYRN-HLLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQLLNNLDRDL 548
            K +    K   + H+L+SETY+GGHVE LESGVFRSD+P  FK++P+A++ L+  ++R L
Sbjct: 518  KQEQVFNKLTDDGHVLDSETYVGGHVEALESGVFRSDIPCRFKMNPAAFDFLIQRVERTL 577

Query: 549  QYAIKVEGKMDLESVSNYDEVKNAIMEKLLRLQEEPIREECPLIYHLDVAAMYPNIILTN 608
            ++AI+ E K+ LE V+N++EV + I  KL+ L+E P R ECPLIYHLDV AMYPNIILTN
Sbjct: 578  RHAIEEEEKIPLEQVTNFNEVCDEIKRKLISLKEVPNRIECPLIYHLDVGAMYPNIILTN 637

Query: 609  RLQPPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYYHLKKQIESE----- 663
            RLQP ++V +  C ACDFN+PG  C R++ W WRGEI    RS+++ +++Q+ESE     
Sbjct: 638  RLQPSAMVDEATCAACDFNKPGANCQRRMTWQWRGEIMPASRSEFHRIQQQLESEKFPPV 697

Query: 664  FVDGTNGHLSKSFLDLPKMEQQSRLKDRLKKYCQKAYKRVLDKPVTELREAGICMRENSF 723
            F +G      ++F +L + EQ    K RL  YC+KAYK+V    + E R   IC RENSF
Sbjct: 698  FPNGP----PRAFHELNREEQARHEKKRLGDYCRKAYKKVHLTRLEE-RVTTICQRENSF 752

Query: 724  YVDTVRSFRDRRYEYKGLNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHKCILN 783
            YVDTVR+FRDRRYE+KGL+KVWK KLS A+ +G++ +++  ++M +LY+SLQLAHKCILN
Sbjct: 753  YVDTVRAFRDRRYEFKGLHKVWKKKLSTAQDNGDAAEVKRCKNMEILYESLQLAHKCILN 812

Query: 784  SFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLPGSFP 843
            SFYGYVMRKGARWYSMEMAG+V YTGA II  AR LIE+IG+PLELDTDGIWCVLP +FP
Sbjct: 813  SFYGYVMRKGARWYSMEMAGIVCYTGANIITQARELIEQIGRPLELDTDGIWCVLPNTFP 872

Query: 844  ENFTFKTKDLKK-KLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEFEV 902
            ENF  K+ + KK K+TISYP  MLN+ V    TN QYQ LVD  S TYET +E SI FEV
Sbjct: 873  ENFVIKSTNEKKPKVTISYPGAMLNIMVKEGFTNHQYQELVDAASLTYETRAENSIFFEV 932

Query: 903  DGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKF 962
            DGPY AMILPASKEEG  +KKRYAVFN+DG+LAELKGFE+KRRGEL+LIK+FQ+ +F+ F
Sbjct: 933  DGPYLAMILPASKEEGKKLKKRYAVFNEDGSLAELKGFEVKRRGELQLIKIFQSSVFEAF 992

Query: 963  LHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLADYGEQKSCA 1022
            L G+T+EE Y++VA VA+ WLD+L ++  ++ D+EL + ISE+ +MS+ L DYGEQKS +
Sbjct: 993  LKGTTLEEVYASVAKVADYWLDVLYSKAANMPDAELFELISENRSMSRKLEDYGEQKSTS 1052

Query: 1023 VTTARRLSDFLGDTMVKDKGLRCQYIVACEPQGTPVSERAVPVAIFETDAEIMKFYLRKW 1082
            ++TA+RL++FLGD MVKD GL C+Y+++ +P+G+PV+ERA+P+AIF+ +  + K +LRKW
Sbjct: 1053 ISTAKRLAEFLGDQMVKDAGLSCRYVISRKPEGSPVTERAIPLAIFQAEESVKKHFLRKW 1112

Query: 1083 CKTSS--DVGIRSIVDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLYKKVRE 1140
             K  S  D+ IRSI+DWSYY +RL SAIQKIITIPAA+Q+V NPVPRV HPDWL+KK+ E
Sbjct: 1113 LKMPSLHDLDIRSILDWSYYIERLGSAIQKIITIPAALQQVKNPVPRVRHPDWLHKKLLE 1172

Query: 1141 KEDKFRQRKLVDIFSSLKKDDFLNKTCNAETNLMDENVEDLEDFPKKRRNSVNGPRPIVR 1200
            K D ++Q+K+ ++F+S  K         A+  L      D+ED    +       RP+  
Sbjct: 1173 KNDIYKQKKISELFTSEGKRQV------AQQTLAAGETPDMEDLAAPQ-------RPVQP 1219

Query: 1201 CFEVNNEQKTVKTTD--QVDSLRQQLEPSEVSDQQPSSQNAIDTENIDRIVDYKGWLELK 1258
               ++ ++K +   +  Q ++  Q+L  S      P        E I  +V    WL   
Sbjct: 1220 AILISTKRKRISQGEDSQTETQEQELTQSWREILGPPPAMGATREEI--LV----WLRYH 1273

Query: 1259 KRKWKDNLDRRKKQKLGSLRASHQANGVSESLGDMINHKEAQRRTGVGSYFRRQETAMTR 1318
            K+KW+  L +RK+++    +     +G S+  G  +        TG+GS+ RR   ++  
Sbjct: 1274 KKKWELQLRQRKERR----KRRRLIDGESQPTGGGV--IRGGPTTGLGSFLRRTARSILD 1327

Query: 1319 CHWQIIQLVPSSQSGVFLAWVVVEGIMVRIPITVPRLFYLNSKDPIVEKFPG-RRVNKTL 1377
              WQI+Q+  +S  G++  W V+   +  + + +PR+FY+N + P  E+    ++VN+ L
Sbjct: 1328 MPWQIVQIAETSHPGLYKLWAVIGSDLHCMKLNIPRVFYVNQRVPKQEEAATCKKVNRIL 1387

Query: 1378 PHGRRSFNLIEVMIDEDQFRKESKKLAALLADPEVE 1413
            P    +  L +  + ED +++   ++ A L+ P++E
Sbjct: 1388 PRSGVACFLYQYTVPEDMYQEHINEINADLSAPDIE 1423



 Score =  314 bits (805), Expect = 3e-82,   Method: Compositional matrix adjust.
 Identities = 195/614 (31%), Positives = 317/614 (51%), Gaps = 75/614 (12%)

Query: 1442 LARYAHILWISDDGVPDLGGTSEEDECF---ADEVHQPVLTYPGAYRKVSVELKIHHLSV 1498
            L ++ H+LW+S    PDLGG   +D      +DE     +   G Y  V VEL I  L+V
Sbjct: 1676 LRKHNHLLWLSPTARPDLGGKEADDSRLVMESDERGSMEINSQGCYSTVCVELDIQSLAV 1735

Query: 1499 NALLKSNQVNEMEGGGLFG--FD-------QDMNSGPYN-NELCGFDETTSSAPAFRVVK 1548
            N +L+S  VN+MEGG   G  FD       ++M SG    N +  +DET   +  FR++K
Sbjct: 1736 NTILQSQHVNDMEGGASIGVSFDVIQHASLEEMMSGNQGANAVASYDETALCSNTFRILK 1795

Query: 1549 QLIQRCLTDAVTSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEF 1608
             ++   + +     NV+AD  + H YRWL SP S L+DP LHR L  +M+K+F  L+AEF
Sbjct: 1796 SMVVGWVREITQYHNVYADNQVMHFYRWLRSPSSLLYDPALHRTLLNMMKKIFLQLVAEF 1855

Query: 1609 RKLGATIIFANFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLF 1668
            ++LG+++I+ NF+++I+ T K  +  A AY + +  ++ T+E+F  + +     W  LL+
Sbjct: 1856 KRLGSSVIYGNFNRLILCTKKRRIDDAIAYVEYITNSIHTKEIFHSLSITFSRCWEFLLW 1915

Query: 1669 MDQYNYGGIPARADESL---DDDSQVD--------------------------------- 1692
            MD  N GG+  +   SL   + DS+                                   
Sbjct: 1916 MDPANCGGVKGKLPSSLLYGEHDSEKKKKDGAEEDGSDDEDEHEENQEEDEEQDREEDVE 1975

Query: 1693 --IVSSWNIAEYLPK--EIQDHFVLVVSEFM---YIPWKHAQKLAASRASLQEGSSCT-- 1743
              I S+WNI +YLP+    Q +F++++S ++   Y   +   +  A  A+  +    T  
Sbjct: 1976 DLIESNWNIMQYLPQTASCQKYFLMIISAYIAAVYHSMRQELRRNAPGATPIKRRGATQA 2035

Query: 1744 ---PSITVAAAENFESHIVQYVKGEIS-SYFTGKLLSIVRDAIHHMKKMNNDQHNSPGVM 1799
               PS  V+A     +   +YV  E++ ++FT  +   ++  +   + +       P  +
Sbjct: 2036 SQQPSGDVSALPGLITFSQEYVSSELTQNFFT--ITQKIQKKVSSTRSVTLPSEMFP--V 2091

Query: 1800 QTAANIHKVDAPLEFIKHVCAAFALDQNVQHDVLVMRKNLLKYVRVREFAPEAEFRDPCP 1859
               +++   +  LEFIK+VC   +LD N+ + V  ++++LL+ V V EF+ +A+FRDPC 
Sbjct: 2092 LPGSHLPLNNPALEFIKYVCQVLSLDANIVNQVNKLKRDLLRLVDVGEFSEDAQFRDPCK 2151

Query: 1860 SFILPNVICSYCNDCRDLDLCRDMALLAQD------WHCAMPQCGQPYDREVMENALLQI 1913
            S++LP VIC +CN CRDLDLC+D A ++QD      W C+   C   YD E +E AL++ 
Sbjct: 2152 SYVLPEVICHHCNFCRDLDLCKDPA-VSQDGSVLPQWFCS--NCQAQYDTESIEMALVEA 2208

Query: 1914 VRQRERLYHLQDLVCIRCNQVKAAHLAEQCACAGSFRCKEDASDFRSKMQIFLNIANRQG 1973
            ++++   Y LQD+ C +C  VK A++   C+CAG F        F  ++++F NIA    
Sbjct: 2209 LQKKLMSYTLQDVECAKCKGVKEANMPLYCSCAGDFNLTFTTKSFSEQVEVFRNIAAHYN 2268

Query: 1974 FQLLQECTSWILEV 1987
               L E   WI+ +
Sbjct: 2269 MSFLLETIDWIISM 2282


>gi|196012038|ref|XP_002115882.1| hypothetical protein TRIADDRAFT_30078 [Trichoplax adhaerens]
 gi|190581658|gb|EDV21734.1| hypothetical protein TRIADDRAFT_30078 [Trichoplax adhaerens]
          Length = 2239

 Score = 1414 bits (3660), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 716/1415 (50%), Positives = 965/1415 (68%), Gaps = 60/1415 (4%)

Query: 25   EELEAKLGYDLFSEGDKRLGWLLTFASSSLEDEDTRKVYSCIDLYFVSQDGSTFKSKYKF 84
            ++L+ K G++   +  +RLGWL+   S+ L D D  +++S +D YFV +DGS FK    +
Sbjct: 28   DKLDTKFGFEQCKDNRERLGWLINMHSTELID-DNERIFSAVDYYFVEEDGSRFKVTMPY 86

Query: 85   RPYFYAATKEKMEMDVEAYLRRRYESQIADIEILEKEDLDLKNHLSGLHKSYLKISFDTV 144
            +PYFY A K+  E +V +YL +R+   +  ++I+ KE+L+L NHL+G+ + YLK+SF+TV
Sbjct: 87   KPYFYVAVKKDTEAEVASYLLKRFSGVLTTVDIISKEELNLPNHLAGITQKYLKLSFNTV 146

Query: 145  QQLMDVKKDLLHVVERNQAKFDAAEAYESILT---------------GKREQRPQDFLDC 189
               + V+K +   + +N  +    EA + +LT                  E+   D +D 
Sbjct: 147  TDFLTVRKVVQPAIVKNIEREKTHEA-DMLLTRYIPKFTFSITFDSGNHMERMHSDAIDN 205

Query: 190  IVDLREYDVPYHIRFAIDNDVRCGQWYDV-SISSTGPLLEKRVDLLQRAEVHVCAFDIET 248
            ++D+REYDVPYH+R AID D+R G WYDV +     PL+ +R DLL R +  V AFDIET
Sbjct: 206  LIDIREYDVPYHVRLAIDLDIRVGYWYDVKNRGELPPLITRRDDLLDRPDPLVLAFDIET 265

Query: 249  TKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNVN 308
            TKLPL+FPD+  D IMMISYM DGQGYLIINRE V EDI+D EYTPKPE+EG F + N  
Sbjct: 266  TKLPLRFPDSSSDAIMMISYMADGQGYLIINREIVSEDIDDFEYTPKPEYEGSFIIFNEP 325

Query: 309  NEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDKNQGEC 368
            +E+ LL  +F H+ E+KP IY TYNGD FDWPF+E RAA H   MSEE+GF  D NQ E 
Sbjct: 326  DEVNLLNRFFQHIIELKPTIYATYNGDAFDWPFIEARAAFHDINMSEEIGFSKD-NQDEY 384

Query: 369  RAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQMMAS 428
            ++++ACH+DC+ WVKRDSYLP GS  LKAVTKAKL Y+P+E++PE+M R A E+PQ++A+
Sbjct: 385  KSRYACHMDCYRWVKRDSYLPVGSHNLKAVTKAKLRYNPIELDPEEMCRMASEQPQILAN 444

Query: 429  YSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVICP 488
            YSVSDAVATYYLYM YVHPF+FSL TIIPM PDEVLRKGSGTLCE LLMVQAY+AN+I P
Sbjct: 445  YSVSDAVATYYLYMKYVHPFVFSLCTIIPMKPDEVLRKGSGTLCETLLMVQAYQANIIFP 504

Query: 489  NKHQSDPEKFY-RNHLLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQLLNNLDRD 547
            NK ++   KF    HLLE ETY+GGHVE +ESGVFRSD+P  FKL P+A+++L NN+   
Sbjct: 505  NKQETILTKFTDEGHLLEEETYVGGHVEAIESGVFRSDIPCKFKLVPAAFDKLTNNIRAT 564

Query: 548  LQYAIKVEGKMDLESVSNYDEVKNAIMEKLLRLQEEPIREECPLIYHLDVAAMYPNIILT 607
            +++AI+VE K+ ++SV+N +EV   I EKL  L+  P R E PLIYHLDV AMYPNIILT
Sbjct: 565  MRHAIEVEEKVPMDSVTNIEEVYEDIAEKLQALKNTPSRLENPLIYHLDVGAMYPNIILT 624

Query: 608  NRLQPPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYYHLKKQIESEFVDG 667
            NRLQP +IV +  C ACDFN+PG  C RK+EW WRG+     RS+Y+ +++Q+ESE + G
Sbjct: 625  NRLQPSAIVDEATCAACDFNKPGANCQRKMEWTWRGQFMPASRSEYHAIRQQLESEMIPG 684

Query: 668  -TNGHLSKSFLDLPKMEQQSRLKDRLKKYCQKAYKRVLDKPVTELREAGICMRENSFYVD 726
             ++   +K+F  L ++EQ S  K RL  YC++ Y++V     T  R + +C RENSFYVD
Sbjct: 685  KSSNEENKAFYQLSRVEQASIEKKRLADYCRRVYRKV-HLTNTGPRTSTVCQRENSFYVD 743

Query: 727  TVRSFRDRRYEYKGLNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHKCILNSFY 786
            TVR+FRDRRYEYK   K WK ++S A + G+  +I+ A+   +LYDSLQLAHKCILNSFY
Sbjct: 744  TVRAFRDRRYEYKRALKKWKREVSTATSKGDPGEIKSAKSKEILYDSLQLAHKCILNSFY 803

Query: 787  GYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLPGSFPENF 846
            GYVMRKGARWYSMEMAG+V YTGA II  AR ++E+IG+PLELDTDGIWC LP SFPEN+
Sbjct: 804  GYVMRKGARWYSMEMAGIVCYTGASIITRAREIVEQIGRPLELDTDGIWCALPASFPENY 863

Query: 847  TFKTKDLKK-KLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEFEVDGP 905
              +T + ++  + ISYP  +LN+ V    TN QY  LVD     Y   SE SI FEVDGP
Sbjct: 864  VIRTNNPQRPSVIISYPNAILNLMVKDEFTNHQYNELVDSTKLRYTFRSENSIFFEVDGP 923

Query: 906  YKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFLHG 965
            YKAMILPASKEEG  +KKRYAVFN+DG+LAELKGFE+KRRGEL+LIK+FQ+ +F+ FL G
Sbjct: 924  YKAMILPASKEEGKKLKKRYAVFNEDGSLAELKGFEVKRRGELQLIKIFQSSVFEAFLLG 983

Query: 966  STIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLADYGEQKSCAVTT 1025
            S++EECY +V+ +A+ WLD+L ++  ++ DSEL D ISE+  M++SL +YG QKS +++T
Sbjct: 984  SSLEECYKSVSKIADYWLDILHSKAINLPDSELFDLISENRNMARSLEEYGNQKSSSIST 1043

Query: 1026 ARRLSDFLGDTMVKDKGLRCQYIVACEPQGTPVSERAVPVAIFETDAEIMKFYLRKWCKT 1085
            A+RL++FLGD MV+DKGL C++I++ +P+G PV+ERA+P+AIF+T+  +   YLRKW K+
Sbjct: 1044 AKRLAEFLGDQMVRDKGLSCRFIISRKPEGAPVTERAIPLAIFQTERSVKHHYLRKWLKS 1103

Query: 1086 SS--DVGIRSIVDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLYKKVREKED 1143
             S  D  IRSI+DW YY +RLSSAIQKIITIPAA+Q +SNP+PRV HP+WL+K++ EK D
Sbjct: 1104 PSLKDFDIRSILDWDYYIERLSSAIQKIITIPAALQGISNPIPRVQHPNWLHKRLLEKND 1163

Query: 1144 KFRQRKLVDIFSSLKKDDFLNKTCNAETNLMDENVEDLEDFPKKRRNSVNGPRPIVRCFE 1203
             ++Q ++ +IF    K     +T N E  + +  V D+ED    +          V+ F 
Sbjct: 1164 MYKQSRISEIFKKEPKKSDDRQTINTEEKI-NNPVIDIEDLSSGKSFKKTSITSTVKKF- 1221

Query: 1204 VNNEQKTVKTTDQVDSLRQQLE----PSEVSDQQPSSQNAIDTENIDRIVDYKGWLELKK 1259
                    KTT+  DS +  LE    P + +   P + N  + +       +  WL  +K
Sbjct: 1222 ------FRKTTNIKDSSKSDLEDLSLPWKDALGIPPALNRDEEQ-------FGDWLRFQK 1268

Query: 1260 RKWKDNLDRRKKQKLGSLRASHQANGVSESLGDMINHKEAQRRTGVGSYFRRQETAMTRC 1319
            RKW   L ++KK++        Q    S SL       E + R  + +  R+Q   +   
Sbjct: 1269 RKWNYQLKQKKKRR--------QTRSDSGSL-------ELEERWDMSAMMRKQANILLNS 1313

Query: 1320 HWQIIQLVPSSQSGVFLAWVVVEGIMVRIPITVPRLFYLNSKDPIV-EKFPGRRVNKTLP 1378
             WQI+Q+  +   G F  WV++   M  + + VPR+FY+N K P   E    R+VN+ LP
Sbjct: 1314 IWQIVQIAETDVMGRFRLWVLIGIEMYSLYLRVPRIFYVNLKRPKQGESVVWRKVNRQLP 1373

Query: 1379 HGRRSFNLIEVMIDEDQFRKESKKLAALLADPEVE 1413
            H  + +NL E  + E+ F + S +L+A L+ P+VE
Sbjct: 1374 HSSQVYNLYEYSVPEEIFAERSGELSAELSSPDVE 1408



 Score =  328 bits (842), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 193/637 (30%), Positives = 334/637 (52%), Gaps = 68/637 (10%)

Query: 1408 ADPEVEVLGWQQNAAKIGMQRCAASSQWFNERISLARYAHI------------------- 1448
            +D    +L WQ++A +  +Q       W   R+  ARYAHI                   
Sbjct: 1600 SDNRYPILDWQRHAVRRMIQHHLNIEIWLENRLDHARYAHIPLGNMPADVPLFVNDLFFA 1659

Query: 1449 ---------LWISDDGVPDLGGTSEEDECF-ADEVHQPVLTYPGAYRKVSVELKIHHLSV 1498
                     +W S    PDLGG  ++D    ++E+    L  PG Y  VS E+ +H L+V
Sbjct: 1660 RYLAKNNHLIWASRTPRPDLGGKEDDDSSIVSEELPSIELNNPGCYPSVSAEISMHGLAV 1719

Query: 1499 NALLKSNQVNEMEGGGLFGF-------DQDMNSGPYNNELCGFDETTSSAPAFRVVKQLI 1551
            +++L+S ++ + E    F         D  + +G    EL  +DE T  +  FR++K ++
Sbjct: 1720 SSVLQSLRLGDFETDLTFDAAPQASLDDIVITNGNPGTELSSYDEMTLCSSTFRIMKIMV 1779

Query: 1552 QRCLTDAVTSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEFRKL 1611
               L +  +  N +AD  L H YRWL SP + L+DP ++RI+  +M+K+FA LLAEF++L
Sbjct: 1780 HSWLHEVSSYENHYADLQLMHFYRWLKSPLALLYDPAMYRIVRFLMEKLFAQLLAEFKRL 1839

Query: 1612 GATIIFANFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLFMDQ 1671
            G+TII  +FSK+II T K  ++ A++Y + +L+++ +R++F+ IEL     W  L++MD 
Sbjct: 1840 GSTIIHGSFSKIIICTKKRRVNDARSYLEFILQSIASRDMFQSIELRFSMCWEYLMWMDH 1899

Query: 1672 YNYGGIPARAD-----------ESLDD----DSQVDIVSSWNIAEYLPK--EIQDHFVLV 1714
             N+GGI ++AD           +S+ D    ++++ +  +WNI +YLP     QD F ++
Sbjct: 1900 ANFGGIRSKADVFEFDQNCDESDSISDENNEENELRVEMNWNICKYLPTLASCQDFFQII 1959

Query: 1715 VSEFMYIPWKHAQKLAASRASLQEGSSCTPSITVAAAENFESHIVQYVKGEISSYFTGKL 1774
            ++ F++  +K    +      ++         T ++   F     QY++ E+    T +L
Sbjct: 1960 IAGFVHAMYKKQCDITPGNTPVKRYVGSQSQSTSSSVVTFAQ---QYIEKEL----TQQL 2012

Query: 1775 LSIVRDAIHHMKKMNNDQHNSPGVMQTAANIHKV--DAPLEFIKHVCAAFALDQNVQHDV 1832
             S+ +  I  M    N + ++          H V  +  L+F+K VC   +LD  +Q+ V
Sbjct: 2013 FSLTQ-KIQKMLPYGNAEKDTTDYFPDLPGSHLVLRNPALQFVKAVCKVLSLDSRIQNRV 2071

Query: 1833 LVMRKNLLKYVRVREFAPEAEFRDPCPSFILPNVICSYCNDCRDLDLCRDMALLAQD--- 1889
              +R++LL+ + V EF+ +A F++PC S+++P VIC++CN C DLD+CRD+ ++  D   
Sbjct: 2072 NKLRRDLLRLIGVGEFSQDAIFQNPCISYVIPEVICTFCNSCTDLDICRDIPVIQDDVPY 2131

Query: 1890 WHCAMPQCGQPYDREVMENALLQIVRQRERLYHLQDLVCIRCNQVKAAHLAEQCACAGSF 1949
            W C    C   Y+ E++E  L+ +++++   Y +QDL C++C QVK   ++  C+CAG +
Sbjct: 2132 WRCL--NCENNYETEMIEQHLISVIKRQAVSYLVQDLKCLKCRQVKEDDMSTHCSCAGDY 2189

Query: 1950 RCKEDASDFRSKMQIFLNIANRQGFQLLQECTSWILE 1986
                      SK++IF N+A       LQE   +I++
Sbjct: 2190 LTTISTDSVLSKLRIFANLARHYNLAQLQETVDYIID 2226


>gi|449477587|ref|XP_002187342.2| PREDICTED: DNA polymerase epsilon catalytic subunit A [Taeniopygia
            guttata]
          Length = 2284

 Score = 1414 bits (3659), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 712/1383 (51%), Positives = 963/1383 (69%), Gaps = 53/1383 (3%)

Query: 56   DEDTRKVYSCIDLYFVSQDGSTFK-SKYKFRPYFYAATKEKMEMDVEAYLRRRYESQIAD 114
            DED R+  S +D YF+ +DGS FK     ++PYFY AT++  E +V ++L ++++ +IA 
Sbjct: 69   DED-RQSVSAVDYYFIQEDGSRFKWVALPYKPYFYIATQKGCEREVSSFLSKKFQGKIAK 127

Query: 115  IEILEKEDLDLKNHLSGLHKSYLKISFDTVQQLMDVKKDLLHVVERNQAKFDAAEAYESI 174
            +E + KEDLDL NHL GL ++Y+K+SF+TV+ L+ V+K++   V +N+ +  A++ Y ++
Sbjct: 128  LETVPKEDLDLPNHLVGLKRNYIKLSFNTVEDLVKVRKEISPAVRKNREQDQASDVYTTM 187

Query: 175  LTGKR------------EQRPQDFLDCIVDLREYDVPYHIRFAIDNDVRCGQWYDVSI-- 220
            L+                ++  + +D IVD+REYDVPYH+R +ID  +    WY+V    
Sbjct: 188  LSSALSGGSLSTDEEGASKKIANQMDNIVDMREYDVPYHVRLSIDLKIHVAHWYNVRYRG 247

Query: 221  SSTGPLLEKRVDLLQRAEVHVCAFDIETTKLPLKFPDADYDIIMMISYMLDGQGYLIINR 280
            ++  P + +R DL++R +  V AFDIETTKLPLKFPDAD D IMMISYM+DGQGYLI NR
Sbjct: 248  NTYPPEITRRDDLVERPDPVVLAFDIETTKLPLKFPDADTDQIMMISYMIDGQGYLITNR 307

Query: 281  ECVGEDIEDLEYTPKPEFEGYFKVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWP 340
            E V E+IED E+TPKPE+EG F V N  +E  L++ WF H+QE KP I VTYNGD+FDWP
Sbjct: 308  EIVSENIEDFEFTPKPEYEGPFCVFNEPDEAHLIQRWFEHVQETKPTIIVTYNGDFFDWP 367

Query: 341  FLETRAAHHGFKMSEELGFQCDKNQGECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTK 400
            F+E RAA HG  M +E+GFQ D +QGE +A    H+DC  WVKRDSYLP GS  LKA  K
Sbjct: 368  FVEARAAAHGINMYQEIGFQKD-SQGEYKASQCIHMDCLRWVKRDSYLPVGSHNLKAAAK 426

Query: 401  AKLGYDPLEVNPEDMVRFAKEKPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSP 460
            AKLGYDP+E++PE+M R A E+PQ +A+YSVSDAVATYY+YM YVHPFIF+L TIIPM P
Sbjct: 427  AKLGYDPVELDPEEMCRMATEEPQTLATYSVSDAVATYYMYMKYVHPFIFALCTIIPMEP 486

Query: 461  DEVLRKGSGTLCEMLLMVQAYKANVICPNKHQSDPEKFYRN-HLLESETYIGGHVECLES 519
            DEVLRKGSGTLCE LLMVQAY AN+I PNK + +  K   + H+L+SETY+GGHVE LES
Sbjct: 487  DEVLRKGSGTLCEALLMVQAYHANIIFPNKQEQEFNKLTEDGHVLDSETYVGGHVEALES 546

Query: 520  GVFRSDLPTSFKLDPSAYEQLLNNLDRDLQYAIKVEGKMDLESVSNYDEVKNAIMEKLLR 579
            GVFRSD+P  FK++P+A++ L+ ++++ LQ+AI+ E  + L+ V+N+ EV + I  KL  
Sbjct: 547  GVFRSDIPCRFKMNPAAFDFLVQHVEKTLQHAIEEEEGLPLDQVTNFQEVCDEIKAKLNS 606

Query: 580  LQEEPIREECPLIYHLDVAAMYPNIILTNRLQPPSIVTDEVCTACDFNRPGKTCLRKLEW 639
            L++ P R ECPLIYHLDV AMYPNIILTNRLQP +IV +  C ACDFN+PG  C R++ W
Sbjct: 607  LKDVPNRIECPLIYHLDVGAMYPNIILTNRLQPSAIVDEATCAACDFNKPGANCQRRMTW 666

Query: 640  VWRGEIFMGKRSDYYHLKKQIESE-----FVDGTNGHLSKSFLDLPKMEQQSRLKDRLKK 694
             WRGE     RS+Y+ +++Q+ESE     F DG      ++F +L + EQ    K RL  
Sbjct: 667  QWRGEFMPASRSEYHRIQQQLESEKFPSLFPDGP----PRAFHELSQEEQAKYEKKRLAD 722

Query: 695  YCQKAYKRVLDKPVTELREAGICMRENSFYVDTVRSFRDRRYEYKGLNKVWKGKLSEAKA 754
            YC+KAYK++    V E R   IC RENSFYVDTVR+FRDRRYE+KGL+KVWK KLS A  
Sbjct: 723  YCRKAYKKIHVTKVEE-RVTTICQRENSFYVDTVRAFRDRRYEFKGLHKVWKKKLSAAVE 781

Query: 755  SGNSIKIQEAQDMVVLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQ 814
            +G++ +++  ++M +LYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAG+V +TGA II 
Sbjct: 782  TGDASEVKRCKNMEILYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGIVCFTGANIIT 841

Query: 815  NARLLIEKIGKPLELDTDGIWCVLPGSFPENFTFKTKDLKK-KLTISYPCVMLNVDVARN 873
             AR LIE+IG+PLELDTDGIWCVLP SFPENF  K+ ++KK K+TISYP  MLN+ V   
Sbjct: 842  QARELIEQIGRPLELDTDGIWCVLPNSFPENFVIKSTNIKKPKVTISYPGAMLNILVKEG 901

Query: 874  NTNDQYQTLVDPVSKTYETHSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGT 933
             TNDQYQ L DP S TY T SE SI FEVDGPY AMILPASKEEG  +KKRYAVFN+DG+
Sbjct: 902  FTNDQYQELQDPASLTYVTRSENSIFFEVDGPYLAMILPASKEEGKKLKKRYAVFNEDGS 961

Query: 934  LAELKGFEIKRRGELKLIKVFQAELFDKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDI 993
            LAELKGFE+KRRGEL+L+K+FQ+ +F+ FL GST+EE Y++VA VA+ WLD+L ++  ++
Sbjct: 962  LAELKGFEVKRRGELQLVKIFQSSVFEAFLKGSTLEEVYASVAKVADYWLDVLYSKAANM 1021

Query: 994  ADSELIDYISESSTMSKSLADYGEQKSCAVTTARRLSDFLGDTMVKDKGLRCQYIVACEP 1053
             DSEL + ISE+ +MS+ L DYGEQKS +++TARRL++FLGD MVKD GL C++I++ +P
Sbjct: 1022 PDSELFELISENRSMSRKLEDYGEQKSTSISTARRLAEFLGDQMVKDAGLSCRFIISKKP 1081

Query: 1054 QGTPVSERAVPVAIFETDAEIMKFYLRKWCKTSS--DVGIRSIVDWSYYKQRLSSAIQKI 1111
            +G+PV+ERA+P+AIF+ +  + K YLRKW K+ S  D  IR+I+DW YY +RL S IQKI
Sbjct: 1082 EGSPVTERAIPLAIFQAEPSVRKHYLRKWLKSPSLQDFNIRAILDWDYYIERLGSTIQKI 1141

Query: 1112 ITIPAAMQKVSNPVPRVVHPDWLYKKVREKEDKFRQRKLVDIFSSLKKDDFLNKTCNAET 1171
            ITIPAA+Q+V NPVPRV HPDWL+KK+ EK D ++Q+K+ ++F S  K   L       T
Sbjct: 1142 ITIPAALQQVKNPVPRVRHPDWLHKKLLEKNDVYKQKKINELFVSEGKKQILASRPVEGT 1201

Query: 1172 NLMDENVEDLEDFPKKRRNSVNGPRPIVRCFEVNNEQKTVKTTDQVDSLRQQLEPSEVSD 1231
               +  V D+EDF      +V  P P+V    + N++K +   ++   L Q LE S+   
Sbjct: 1202 P--NSQVSDIEDF-----GAVKIPLPLV---PIANKRKRIPAAEESQELSQDLELSQSWR 1251

Query: 1232 QQPSSQNAIDTENIDRIVDYKGWLELKKRKWKDNLDRRKKQKLGSLRASHQANGVSESLG 1291
            +       + T   + +V    WL   ++KW+    +R++++                + 
Sbjct: 1252 EILGPPPPLGTTKEEHLV----WLRFHQKKWELQALQRQERRKRRRLEDGGMVAGGGVVR 1307

Query: 1292 DMINHKEAQRRTGVGSYFRRQETAMTRCHWQIIQLVPSSQSGVFLAWVVVEGIMVRIPIT 1351
            D ++        G+ SY RR   ++    WQ++Q+  +SQ G+F  W V+   +  I ++
Sbjct: 1308 DALS-------KGLSSYLRRTARSVLDLPWQVVQITETSQPGLFRLWAVIGSDLHCIKLS 1360

Query: 1352 VPRLFYLNSKDPIVEKFPG-RRVNKTLPHGRRSFNLIEVMIDEDQFRKESKKLAALLADP 1410
            +PR+FY+N + P  E     R+VN+ LP     +NL E  + ED +++   ++ A L+ P
Sbjct: 1361 IPRVFYVNQRVPKPEDGTAYRKVNRILPRSNLVYNLYEYSVPEDMYQEHINEINADLSAP 1420

Query: 1411 EVE 1413
            ++E
Sbjct: 1421 DIE 1423



 Score =  325 bits (833), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 196/607 (32%), Positives = 315/607 (51%), Gaps = 69/607 (11%)

Query: 1442 LARYAHILWISDDGVPDLGGTSEEDECFA---DEVHQPVLTYPGAYRKVSVELKIHHLSV 1498
            L R+ H+LW+S    PDLGG   +D       DE     +  PG Y  V +EL I  L+V
Sbjct: 1676 LRRHNHLLWLSPTARPDLGGKEADDNRLVMEFDERASVEINNPGCYSTVCLELDIQSLAV 1735

Query: 1499 NALLKSNQVNEMEGGGLFG--FD-------QDMNSG-PYNNELCGFDETTSSAPAFRVVK 1548
            N +L+S+ VN+MEGG      FD       +DM +G    N    +DET   +  FR++K
Sbjct: 1736 NTVLQSHHVNDMEGGSSMSISFDVIQQASLEDMVTGNQAANIPASYDETALCSNTFRILK 1795

Query: 1549 QLIQRCLTDAVTSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEF 1608
             ++   + +     NV+AD  + H YRWL SP S L+DP LHR LH +M+K+F  L+AEF
Sbjct: 1796 SMVVSWVKEITQYHNVYADNQVIHFYRWLRSPSSLLYDPALHRTLHNMMKKLFLQLVAEF 1855

Query: 1609 RKLGATIIFANFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLF 1668
            ++LG+++++ANF+++I+ T K  +  A +Y + ++ ++ ++E+F  + +     W  LL+
Sbjct: 1856 KRLGSSVVYANFNRIILCTKKRHIEDAISYMEYIINSIHSKEIFHSLTISFSRCWEFLLW 1915

Query: 1669 MDQYNYGGIPARADESL--DDDSQVD--------------------------------IV 1694
            MD  NYGGI  + D  +   +D Q D                                + 
Sbjct: 1916 MDPANYGGIKGKVDSRIHYGEDPQKDTSKTLEEEEEESGEEEEVREEEEKGEPDVEELLE 1975

Query: 1695 SSWNIAEYLPK--EIQDHFVLVVSEFMYIPWKHAQKLAASRASLQEGSS-----CTPSIT 1747
            ++WNIA++LP+    Q +F++++S ++   + H+ K    R +   GS+      T  ++
Sbjct: 1976 NNWNIAQFLPRAGSCQSYFLMIISAYIVAVY-HSMKEELRRNT--PGSTPIKRRSTSQVS 2032

Query: 1748 VAAAENFESH--IVQYVKGEISSYFTGKLLSIVRDAIHHMKKMNNDQHNSPGVMQTAANI 1805
              A     +   ++ + +  +++  T    +I +     M    N    S        + 
Sbjct: 2033 QEALGELRAMPGMITFSQDYVANELTQSFFTITQKIQKKMAGSQNATEPSDMFPVLPGSY 2092

Query: 1806 HKVDAP-LEFIKHVCAAFALDQNVQHDVLVMRKNLLKYVRVREFAPEAEFRDPCPSFILP 1864
              ++ P LEFIK+VC   +LD N+ + V  +R++LL+ + V EF+  A+FRDPC S++LP
Sbjct: 2093 LPLNNPALEFIKYVCKVLSLDTNITNQVNKLRRDLLRLIEVGEFSEAAQFRDPCRSYVLP 2152

Query: 1865 NVICSYCNDCRDLDLCRDMALLAQD------WHCAMPQCGQPYDREVMENALLQIVRQRE 1918
             VIC  CN CRDLDLC+D A L+QD      W C  P C   YD + +E AL++ ++++ 
Sbjct: 2153 EVICRNCNFCRDLDLCKDPA-LSQDRSVLPGWLC--PNCHVQYDTDAIEMALVEALQKKL 2209

Query: 1919 RLYHLQDLVCIRCNQVKAAHLAEQCACAGSFRCKEDASDFRSKMQIFLNIANRQGFQLLQ 1978
              + LQDLVC +C+ VK  H+   C+CAG F     +  F   + +F NIA   G   L 
Sbjct: 2210 MAFVLQDLVCKKCHGVKERHMPVYCSCAGDFTLTISSQVFMDHVSVFRNIARHYGMAYLL 2269

Query: 1979 ECTSWIL 1985
            E   W+L
Sbjct: 2270 ETIEWLL 2276


>gi|291227159|ref|XP_002733554.1| PREDICTED: DNA-directed DNA polymerase epsilon-like [Saccoglossus
            kowalevskii]
          Length = 2217

 Score = 1409 bits (3646), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 719/1423 (50%), Positives = 975/1423 (68%), Gaps = 65/1423 (4%)

Query: 14   TKKQKLIRS-AEEELEAKLGYDLFSEGDKRLGWLLTFASSSLEDEDTRKVYSCIDLYFVS 72
            + + +L RS A +E++++ G+D + E  ++LGWL+    + + D+D R++ S +D YF+ 
Sbjct: 30   SSEARLQRSLANDEMDSRFGFDRYKEPIEKLGWLINMHPTEILDDD-RRLISAVDYYFIQ 88

Query: 73   QDGSTFKSKYKFRPYFYAATKEKMEMDVEAYLRRRYESQIADIEILEKEDLDLKNHLSGL 132
             DGS FK    ++PYFY ATK+  E +V A+L R+Y+  ++ +E + KEDLDL NHL GL
Sbjct: 89   DDGSKFKVSLPYKPYFYVATKKNTEREVSAFLTRKYQGVLSTLETMPKEDLDLHNHLVGL 148

Query: 133  HKSYLKISFDTVQQLMDVKKDLLHVVERNQAKFDAAEAYESILT----GKRE------QR 182
             ++YLK+SF TV  L  VK+DL+ VV +N+ +  ++++Y S+LT    G+ E      ++
Sbjct: 149  KRNYLKLSFLTVSDLNKVKRDLMPVVRKNKEREKSSDSYTSLLTSQLSGQAETSSTASKK 208

Query: 183  PQDFLDCIVDLREYDVPYHIRFAIDNDVRCGQWYDVSISST-GPLLEKRVDLLQRAEVHV 241
              D LD I+D+REYDVPYH+R AID  +  G WY V    T  P + +R DLL R +  V
Sbjct: 209  LSDQLDNIIDIREYDVPYHVRVAIDGKIHVGHWYSVKGRGTLPPEINQRDDLLDRPDPVV 268

Query: 242  CAFDIETTKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGY 301
             AFDIETTKLPLKFPD + D IMMISYM+D QGYLI NRE V ED+ D EYTPKPE+EG 
Sbjct: 269  MAFDIETTKLPLKFPDMETDSIMMISYMIDAQGYLITNREVVAEDVNDFEYTPKPEYEGP 328

Query: 302  FKVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQC 361
            F V N  +E+ LL+ +  H+ EVKP I+VTYNGD FDWPF+E R  +HG  M +E+GFQ 
Sbjct: 329  FIVFNEVDEVSLLQRFIEHVLEVKPHIFVTYNGDMFDWPFVEARCNYHGIDMYKEIGFQK 388

Query: 362  DKNQGECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKE 421
            D  QGE +++   H+D + WVKRDSYLP GSQ LKA +KAKL YDP+E++PE+M R A E
Sbjct: 389  D-TQGEYKSRQCIHMDAYRWVKRDSYLPVGSQNLKAASKAKLRYDPIELDPEEMCRMASE 447

Query: 422  KPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAY 481
            +PQ++A+YSVSDAVATYYLYM YVHPFIF+L TIIPM PDEVLRKGSGTLCE LLMVQA+
Sbjct: 448  EPQVLANYSVSDAVATYYLYMKYVHPFIFALCTIIPMEPDEVLRKGSGTLCEALLMVQAF 507

Query: 482  KANVICPNKHQSDPEKFYRN-HLLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQL 540
             AN+I PNK ++   K   + H+L+SETY+GGHVE LESGVFR+DLP  F++ P A++QL
Sbjct: 508  HANIIFPNKQETIWNKLTSDGHVLDSETYVGGHVEALESGVFRADLPCRFRMVPEAFQQL 567

Query: 541  LNNLDRDLQYAIKVEGKMDLESVSNYDEVKNAIMEKLLRLQEEPIREECPLIYHLDVAAM 600
            ++N+DR ++ AI++E K+ ++ V+N+ EV + I EKL  L++ P R E P+IYHLDV AM
Sbjct: 568  IDNVDRTMKQAIEIEEKVSIDKVTNFQEVCDDIKEKLSALRDTPARLENPIIYHLDVGAM 627

Query: 601  YPNIILTNRLQPPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYYHLKKQI 660
            YPNIILTNRLQP ++V +  C ACDFN+PG  C R + W WRGE     RS++  +++Q+
Sbjct: 628  YPNIILTNRLQPSAMVDEATCAACDFNKPGARCQRNMTWTWRGEFMPASRSEFNRIQQQL 687

Query: 661  ESEFVDGTN-GHLSKSFLDLPKMEQQSRLKDRLKKYCQKAYKRVLDKPVTELREAGICMR 719
            E+E + G N G   + F ++ K EQ    K RL +YC+KAYK+V    + E R+  +C R
Sbjct: 688  ETERIPGLNPGDPPRVFHEIHKEEQAFIEKKRLAEYCRKAYKKVHITRIEE-RQTTVCQR 746

Query: 720  ENSFYVDTVRSFRDRRYEYKGLNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHK 779
            ENSFYVDTVR+FRDRRYE+KG  KVWK KL+ A   G + +I+  +   VLYDSLQLAHK
Sbjct: 747  ENSFYVDTVRAFRDRRYEFKGQLKVWKRKLAAAIDKGEANEIKSCKSKEVLYDSLQLAHK 806

Query: 780  CILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLP 839
            CILNSFYGYVMRKGARWYSMEMAG+V +TGA II  AR ++E+IG+PLELDTDGIWCVLP
Sbjct: 807  CILNSFYGYVMRKGARWYSMEMAGIVCHTGADIITKAREIVEQIGRPLELDTDGIWCVLP 866

Query: 840  GSFPENFTFKTKDLKK-KLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSI 898
             SFPEN+  KT D KK K+TISYP  MLN+ V    TNDQYQ LVDP   TY   SE SI
Sbjct: 867  ASFPENYVIKTTDAKKSKVTISYPGAMLNIMVKDIFTNDQYQELVDPSHLTYIARSENSI 926

Query: 899  EFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAEL 958
             FEVDGPY AMILPASKEEG  +KKRYAVFN DG+LAELKGFE+KR GEL+LIK+FQ+ +
Sbjct: 927  FFEVDGPYLAMILPASKEEGKKLKKRYAVFNFDGSLAELKGFEVKRNGELQLIKIFQSSV 986

Query: 959  FDKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLADYGEQ 1018
            F+ FL G+ +EECY AVA VA+ WLD+L ++  ++ D+EL + ISE+ +MS+ L DYG Q
Sbjct: 987  FEAFLKGTVLEECYGAVAKVADYWLDVLYSKAANMPDTELFELISENRSMSRKLEDYGSQ 1046

Query: 1019 KSCAVTTARRLSDFLGDTMVKDKGLRCQYIVACEPQGTPVSERAVPVAIFETDAEIMKFY 1078
            KS +++TA+RL++FLGD MVKDKGL C++I+A +P+G PV+ERA+P+AIF+ +  + + Y
Sbjct: 1047 KSTSISTAKRLAEFLGDQMVKDKGLSCKFIIAKKPEGAPVTERAIPLAIFQAEPGVKRHY 1106

Query: 1079 LRKWCK--TSSDVGIRSIVDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLYK 1136
            L+KW K   ++D  IR+I+DW YY +RL SAIQKIITIPAA+Q+VSNPVPRV HPDWL+K
Sbjct: 1107 LKKWLKMPAATDFDIRNILDWEYYIERLGSAIQKIITIPAALQQVSNPVPRVAHPDWLHK 1166

Query: 1137 KVREKEDKFRQRKLVDIFSSL--KKDDFLNKTCNAETNLMDENVEDLEDFPKKRRNSVNG 1194
            K+ EK D F+Q+++ ++F+    KK++ + + C          + D+ED    R+ + N 
Sbjct: 1167 KLLEKNDIFKQQRINEMFAPRQKKKEEMVTEDCG---------IGDIEDSGTVRQTTQNT 1217

Query: 1195 PRPIVRCFEVNNEQKTVKTTDQ--VDSLRQQLEPSEVSDQQPSSQNAIDTENIDRIVDYK 1252
                V      + ++ + T D     S R  L P+      P    + + + +       
Sbjct: 1218 IVASV------SRKRRLSTDDSQLTQSWRDVLGPA------PPLGKSREEKQV------- 1258

Query: 1253 GWLELKKRKWKDNLDRRKKQKLGSLRASHQANGVSESLGDMINHKEAQRRTGVGSYFRRQ 1312
             WL   K+KW+    +R+ +K   +       G +   G           TG+G + R+ 
Sbjct: 1259 -WLAYHKKKWQLQAKQRQNRKRRRIDYGDDTGGGAIRSGP---------NTGIGGFLRKT 1308

Query: 1313 ETAMTRCHWQIIQLVPSSQSGVFLAWVVVEGIMVRIPITVPRLFYLNSKDPIVEKFPG-- 1370
              ++    WQI+Q+  ++  GVF AW ++   +  I + VPR FY+N + P  E   G  
Sbjct: 1309 ARSILDMPWQIVQIATTNNIGVFKAWALIGHDLHAIKLNVPRRFYVNQRTP-KESTEGAC 1367

Query: 1371 RRVNKTLPHGRRSFNLIEVMIDEDQFRKESKKLAALLADPEVE 1413
            ++VN+TLP      NL E  + E  +R+ + +L A L+ P+V+
Sbjct: 1368 KKVNRTLPRSALVLNLYEYSVPEFLYRQHANELNADLSSPDVD 1410



 Score =  327 bits (837), Expect = 6e-86,   Method: Compositional matrix adjust.
 Identities = 191/562 (33%), Positives = 295/562 (52%), Gaps = 68/562 (12%)

Query: 1481 PGAYRKVSVELKIHHLSVNALLKSNQVNEMEGG-GLFGFD-------QDMNSGPYNN--E 1530
            PG Y  V VEL I  L+VN LL+S+ +NEMEGG G   FD       +DM +G  N   +
Sbjct: 1661 PGCYPSVCVELDIASLAVNTLLQSHHINEMEGGAGNIAFDVIPQTSLEDMVTGGTNAAAQ 1720

Query: 1531 LCGFDETTSSAPAFRVVKQLIQRCLTDAVTSGNVFADAILQHLYRWLCSPHSKLHDPVLH 1590
            L  +DET   + A +++K ++   L D  T  NVFAD  +   YRWL SP + L+DP L 
Sbjct: 1721 LASYDETALCSVALKILKSMVHGWLRDVTTYKNVFADYQIMQFYRWLRSPSALLYDPALR 1780

Query: 1591 RILHKVMQKVFAMLLAEFRKLGATIIFANFSKVIIDTGKFDLSAAKAYCDSLLKALQTRE 1650
            R +H +MQK+F  L+AEF++LG+TI++ANF+++II T K  +  A AY + +  ++++RE
Sbjct: 1781 RTMHSLMQKLFLQLVAEFKRLGSTIVYANFNRIIICTKKRRIVDAIAYVEYITNSIKSRE 1840

Query: 1651 LFEWIELEPVHFWHSLLFMDQYNYGGIPARADESLDDD---------------------- 1688
            LF  +++     W  L+++D  NYG I  +  +S+ DD                      
Sbjct: 1841 LFHSVDISFQQCWEHLVWLDPANYGAIKGKLPKSVGDDDVKPNDEEENDELELKLNEDEE 1900

Query: 1689 ---SQVDIVSSWNIAEYLPK--EIQDHFVLVVSEFMYIPWKHAQ--------------KL 1729
                + ++  +WNI  YLP+    Q +F ++++ ++   ++H++              K 
Sbjct: 1901 EEEDEYEVEMNWNIMHYLPQAGACQTNFNMIIAGYILAVYQHSKEEQQHHTPGNTPIRKR 1960

Query: 1730 AASRASLQEGSSCTPSITVAAAENFESHIVQYVKGEISSYFTGKLLSIVRDAIHHMKKMN 1789
              ++      ++ TPS TV  A++        V GE+S    G  L I +    +     
Sbjct: 1961 GNTQTQKSSDTTATPS-TVNFAQDL-------VAGELSQQLFGITLKIQKKVSGNRSNHG 2012

Query: 1790 NDQHNSPGVMQTAANIHKVDAPLEFIKHVCAAFALDQNVQHDVLVMRKNLLKYVRVREFA 1849
            N     P +    +++   +  LEFIK +C   +LD N+   V  + ++LLK + V EF+
Sbjct: 2013 NAADEFPQL--PGSHLPLNNPALEFIKAICKVLSLDTNITIQVAKLNRDLLKLISVGEFS 2070

Query: 1850 PEAEFRDPCPSFILPNVICSYCNDCRDLDLCRDMALL-----AQDWHCAMPQCGQPYDRE 1904
             ++ +RDPC S++LP VIC  CN CRDLDLCRD  LL     A  W C   QC   YD  
Sbjct: 2071 EDSNWRDPCLSYVLPEVICKTCNHCRDLDLCRDPLLLQDENTAAVWQCV--QCKSDYDVN 2128

Query: 1905 VMENALLQIVRQRERLYHLQDLVCIRCNQVKAAHLAEQCACAGSFRCKEDASDFRSKMQI 1964
             +E  L++ V++    Y LQD+ C +CN +KA +++  C CAG F      S F  KM++
Sbjct: 2129 EIERLLIEAVQRLSMAYVLQDVTCSKCNMIKALNMSAHCECAGDFDVTMAISKFAEKMKV 2188

Query: 1965 FLNIANRQGFQLLQECTSWILE 1986
            F NIA      LL+E  +WIL+
Sbjct: 2189 FRNIAIHYKMSLLEETVTWILQ 2210


>gi|397487080|ref|XP_003814639.1| PREDICTED: DNA polymerase epsilon catalytic subunit A isoform 2 [Pan
            paniscus]
          Length = 2259

 Score = 1407 bits (3643), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 728/1455 (50%), Positives = 979/1455 (67%), Gaps = 109/1455 (7%)

Query: 3    RRRWD--------RQDGRRTKKQKLIR----SAEEELEAKLGYDLFSEGDKRLGWLLTFA 50
            RRR D        R DG  +    L R       ++++ + G++   E  ++ GWL+   
Sbjct: 8    RRRADPGADGEASRDDGATSSVSALKRLERSQWTDKMDLRFGFERLKEPGEKTGWLINMH 67

Query: 51   SSSLEDEDTRKVYSCIDLYFVSQDGSTFKSKYKFRPYFYAATKEKMEMDVEAYLRRRYES 110
              +L                             ++PYFY AT++  E +V ++L ++++ 
Sbjct: 68   PVAL----------------------------PYKPYFYIATRKGCEREVSSFLSKKFQG 99

Query: 111  QIADIEILEKEDLDLKNHLSGLHKSYLKISFDTVQQLMDVKKDLLHVVERNQAKFDAAEA 170
            +IA +E + KEDLDL NHL GL ++Y+++SF TV+ L+ V+K++   V++N+ +  A++A
Sbjct: 100  KIAKVETVPKEDLDLPNHLVGLKRNYIRLSFHTVEDLVKVRKEISPAVKKNREQDHASDA 159

Query: 171  YESILTG------------KREQRPQDFLDCIVDLREYDVPYHIRFAIDNDVRCGQWYDV 218
            Y ++L+             +  ++  D LD IVD+REYDVPYHIR +ID  +    WY+V
Sbjct: 160  YTALLSSVLQRGGVITDEEETSKKIADQLDNIVDMREYDVPYHIRLSIDLKIHVAHWYNV 219

Query: 219  SISSTGPLLE--KRVDLLQRAEVHVCAFDIETTKLPLKFPDADYDIIMMISYMLDGQGYL 276
                    +E  +R DL++R +  V AFDIETTKLPLKFPDA+ D IMMISYM+DGQGYL
Sbjct: 220  RYRGNAFPVEITRRDDLVERPDPVVLAFDIETTKLPLKFPDAETDQIMMISYMIDGQGYL 279

Query: 277  IINRECVGEDIEDLEYTPKPEFEGYFKVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDY 336
            I NRE V EDIED E+TPKPE+EG F V N  +E  L++ WF H+QE KP I VTYNGD+
Sbjct: 280  ITNREIVSEDIEDFEFTPKPEYEGPFCVFNEPDEAHLIQRWFEHVQETKPTIMVTYNGDF 339

Query: 337  FDWPFLETRAAHHGFKMSEELGFQCDKNQGECRAKFACHLDCFAWVKRDSYLPQGSQGLK 396
            FDWPF+E RAA HG  M +E+GFQ D +QGE +A    H+DC  WVKRDSYLP GS  LK
Sbjct: 340  FDWPFVEARAAVHGLSMQQEIGFQKD-SQGEYKAPQCIHMDCLRWVKRDSYLPVGSHNLK 398

Query: 397  AVTKAKLGYDPLEVNPEDMVRFAKEKPQMMASYSVSDAVATYYLYMTYVHPFIFSLATII 456
            A  KAKLGYDP+E++PEDM R A E+PQ +A+YSVSDAVATYYLYM YVHPFIF+L TII
Sbjct: 399  AAAKAKLGYDPVELDPEDMCRMATEQPQTLATYSVSDAVATYYLYMKYVHPFIFALCTII 458

Query: 457  PMSPDEVLRKGSGTLCEMLLMVQAYKANVICPNKHQSDPEKFYRN-HLLESETYIGGHVE 515
            PM PDEVLRKGSGTLCE LLMVQA+ AN+I PNK + +  K   + H+L+SETY+GGHVE
Sbjct: 459  PMEPDEVLRKGSGTLCEALLMVQAFHANIIFPNKQEQEFNKLTDDGHVLDSETYVGGHVE 518

Query: 516  CLESGVFRSDLPTSFKLDPSAYEQLLNNLDRDLQYAIKVEGKMDLESVSNYDEVKNAIME 575
             LESGVFRSD+P  F+++P+A++ LL  +++ L++A++ E K+ +E V+N++EV + I  
Sbjct: 519  ALESGVFRSDIPCRFRMNPAAFDFLLQRVEKTLRHALEEEEKVPVEQVTNFEEVCDEIKS 578

Query: 576  KLLRLQEEPIREECPLIYHLDVAAMYPNIILTNRLQPPSIVTDEVCTACDFNRPGKTCLR 635
            KL  L++ P R ECPLIYHLDV AMYPNIILTNRLQP ++V +  C ACDFN+PG  C R
Sbjct: 579  KLASLKDVPSRIECPLIYHLDVGAMYPNIILTNRLQPSAMVDEATCAACDFNKPGANCQR 638

Query: 636  KLEWVWRGEIFMGKRSDYYHLKKQIESE-----FVDGTNGHLSKSFLDLPKMEQQSRLKD 690
            K+ W WRGE     RS+Y+ ++ Q+ESE     F +G     +++F +L + EQ    K 
Sbjct: 639  KMAWQWRGEFMPASRSEYHRIQHQLESEKFPPLFPEGP----ARAFHELSREEQAKYEKR 694

Query: 691  RLKKYCQKAYKRVLDKPVTELREAGICMRENSFYVDTVRSFRDRRYEYKGLNKVWKGKLS 750
            RL  YC+KAYK++    V E R   IC RENSFYVDTVR+FRDRRYE+KGL+KVWK KLS
Sbjct: 695  RLADYCRKAYKKIHITKVEE-RLTTICQRENSFYVDTVRAFRDRRYEFKGLHKVWKKKLS 753

Query: 751  EAKASGNSIKIQEAQDMVVLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGA 810
             A   G++ +++  ++M VLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAG+V +TGA
Sbjct: 754  AAVEVGDAAEVKRCKNMEVLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGIVCFTGA 813

Query: 811  KIIQNARLLIEKIGKPLELDTDGIWCVLPGSFPENFTFKTKDLKK-KLTISYPCVMLNVD 869
             II  AR LIE+IG+PLELDTDGIWCVLP SFPENF FKT ++KK K+TISYP  MLN+ 
Sbjct: 814  NIITQARELIEQIGRPLELDTDGIWCVLPNSFPENFVFKTTNVKKPKVTISYPGAMLNIM 873

Query: 870  VARNNTNDQYQTLVDPVSKTYETHSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFN 929
            V    TNDQYQ L +P S TY T SE SI FEVDGPY AMILPASKEEG  +KKRYAVFN
Sbjct: 874  VKEGFTNDQYQELAEPSSLTYVTRSENSIFFEVDGPYLAMILPASKEEGKKLKKRYAVFN 933

Query: 930  DDGTLAELKGFEIKRRGELKLIKVFQAELFDKFLHGSTIEECYSAVAAVANRWLDLLDNQ 989
            +DG+LAELKGFE+KRRGEL+LIK+FQ+ +F+ FL GST+EE Y +VA VA+ WLD+L ++
Sbjct: 934  EDGSLAELKGFEVKRRGELQLIKIFQSSVFEAFLKGSTLEEVYGSVAKVADYWLDVLYSK 993

Query: 990  GKDIADSELIDYISESSTMSKSLADYGEQKSCAVTTARRLSDFLGDTMVKDKGLRCQYIV 1049
              ++ DSEL + ISE+ +MS+ L DYGEQKS +++TA+RL++FLGD MVKD GL C+YI+
Sbjct: 994  AANMPDSELFELISENRSMSRKLEDYGEQKSTSISTAKRLAEFLGDQMVKDAGLSCRYII 1053

Query: 1050 ACEPQGTPVSERAVPVAIFETDAEIMKFYLRKWCKTSS--DVGIRSIVDWSYYKQRLSSA 1107
            + +P+G+PV+ERA+P+AIF+ +  + K +LRKW K+SS  D  IR+I+DW YY +RL SA
Sbjct: 1054 SRKPEGSPVTERAIPLAIFQAEPTVRKHFLRKWLKSSSLQDFDIRAILDWDYYIERLGSA 1113

Query: 1108 IQKIITIPAAMQKVSNPVPRVVHPDWLYKKVREKEDKFRQRKLVDIFSSLKKDDFLNKTC 1167
            IQKIITIPAA+Q+V NPVPRV HPDWL+KK+ EK D ++Q+K+ ++F+   +        
Sbjct: 1114 IQKIITIPAALQQVKNPVPRVKHPDWLHKKLLEKNDVYKQKKISELFTLEGRRQV--TMA 1171

Query: 1168 NAETNLMDENVEDLEDFPKKRRNSVNGPRPIVRCFEVNNEQKTVKTTDQVDSLRQQLEPS 1227
             A  +    +  D+EDF       V  P P      V  ++K V    Q +S  Q L P+
Sbjct: 1172 EASEDSPRPSAPDMEDF-----GLVKLPHPAA---PVTVKRKRVLWESQEES--QDLTPT 1221

Query: 1228 ----EVSDQQPSSQNAIDTENIDRIVDYKGWLELKKRKW----KDNLDRRKKQKLGSLRA 1279
                E+  Q P    A+ T   + +V    WL   K+KW    +  L RRK+Q+L S   
Sbjct: 1222 VPWQEILGQPP----ALGTTQEEWLV----WLRFHKKKWQLQARQRLARRKRQRLESAEG 1273

Query: 1280 SHQANGVSESLGDMINHKEAQRRTGVGSYFRRQETAMTRCHWQIIQLVPSSQSGVFLAWV 1339
              +   + +              TG+GS+ RR   ++    WQI+Q+  +SQ+G+F  W 
Sbjct: 1274 VLRPGAIRDGPA-----------TGLGSFLRRTARSILDLPWQIVQISETSQAGLFRLWA 1322

Query: 1340 VVEGIMVRIPITVPRLFYLNSKDPIVEKFPG-RRVNKTLPHGRRSFNLIEVMIDEDQFRK 1398
            +V   +  I +++PR+FY+N +   VE+    R+VN+ LP     +NL E  + ED +++
Sbjct: 1323 LVGSDLHCIRLSIPRVFYVNQRVAKVEEGASYRKVNRVLPRSNVVYNLYEYSVPEDMYQE 1382

Query: 1399 ESKKLAALLADPEVE 1413
               ++ A L+ P++E
Sbjct: 1383 HINEINAELSAPDIE 1397



 Score =  311 bits (798), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 190/609 (31%), Positives = 305/609 (50%), Gaps = 70/609 (11%)

Query: 1442 LARYAHILWISDDGVPDLGGTSEEDECFA---DEVHQPVLTYPGAYRKVSVELKIHHLSV 1498
            L R+ H+LW+S    PDLGG   +D       D+     +   G Y  V VEL + +L+V
Sbjct: 1650 LQRHNHLLWLSPTARPDLGGKEADDNYLVMEFDDQATVEINSSGCYSTVCVELDLQNLAV 1709

Query: 1499 NALLKSNQVNEMEGGGLFGFDQD----------MNSGPYNNELCGFDETTSSAPAFRVVK 1548
            N +L+S+ VN+MEG    G   D          +  G   +    +DET   +  FR++K
Sbjct: 1710 NTILQSHHVNDMEGADSMGISFDVIQQASLEDMITGGQAASAPASYDETALCSNTFRILK 1769

Query: 1549 QLIQRCLTDAVTSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEF 1608
             ++   + +     N++AD  + H YRWL SP S LHDP LHR LH +M+K+F  L+AEF
Sbjct: 1770 SMVVGWVKEITQYHNIYADNQVMHFYRWLRSPSSLLHDPALHRTLHNMMKKLFLQLIAEF 1829

Query: 1609 RKLGATIIFANFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLF 1668
            ++LG+++I+ANF+++I+ T K  +  A AY + +  ++ ++E+F  + +     W  LL+
Sbjct: 1830 KRLGSSVIYANFNRIILCTKKRRVEDAIAYVEYITSSIHSKEIFHSLTISFSRCWEFLLW 1889

Query: 1669 MDQYNYGGIPARADESLD---DDSQV-------------------------------DIV 1694
            MD  NYGGI  +    +     DSQ                                D++
Sbjct: 1890 MDPSNYGGIKGKVSSRIHCGLQDSQKAGGAEDEQENEDDEEERDGEEEEEAEESNVEDLL 1949

Query: 1695 -SSWNIAEYLPK--EIQDHFVLVVSEFMYIPWKHAQKLAASRASLQEGSSCTPSITVAAA 1751
             ++WNI ++LP+    Q++F+++VS ++   + H  K    R++   GS+       +  
Sbjct: 1950 ENNWNILQFLPQAASCQNYFLMIVSAYIVAVY-HCMKDGLRRSA--PGSTPVRRRGASQL 2006

Query: 1752 ENFESHIVQYVKGEIS---SYFTGKLLSIVRDAIHHMKKMNNDQHNSPGVMQT-----AA 1803
                   V  + G I+    Y   +L          ++K      NS  + +       +
Sbjct: 2007 SQEAEGAVGALPGMITFSQDYVANELTQSFFTITQKIQKKVTGSRNSTELSEMFPVLPGS 2066

Query: 1804 NIHKVDAPLEFIKHVCAAFALDQNVQHDVLVMRKNLLKYVRVREFAPEAEFRDPCPSFIL 1863
            ++   +  LEFIK+VC   +LD N+ + V  + ++LL+ V V EF+ EA+FRDPC S++L
Sbjct: 2067 HLLLNNPALEFIKYVCKVLSLDTNITNQVNKLNRDLLRLVDVGEFSEEAQFRDPCRSYVL 2126

Query: 1864 PNVICSYCNDCRDLDLCRDM------ALLAQDWHCAMPQCGQPYDREVMENALLQIVRQR 1917
            P VIC  CN CRDLDLC+D       A+L Q W C+   C  PYD   +E  L+++++++
Sbjct: 2127 PEVICRSCNFCRDLDLCKDSSFSEDGAVLPQ-WLCS--NCQAPYDSSAIEMTLVEVLQKK 2183

Query: 1918 ERLYHLQDLVCIRCNQVKAAHLAEQCACAGSFRCKEDASDFRSKMQIFLNIANRQGFQLL 1977
               + LQDLVC++C  VK   +   C+CAG F        F  ++ IF NIA       L
Sbjct: 2184 LMAFTLQDLVCLKCRGVKETSMPVYCSCAGDFALTIHTQVFMEQIGIFRNIAQHYSMSYL 2243

Query: 1978 QECTSWILE 1986
             E   W+L+
Sbjct: 2244 LETLEWLLQ 2252


>gi|119575219|gb|EAW54832.1| polymerase (DNA directed), epsilon, isoform CRA_c [Homo sapiens]
          Length = 2216

 Score = 1407 bits (3641), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 718/1419 (50%), Positives = 966/1419 (68%), Gaps = 97/1419 (6%)

Query: 27   LEAKLGYDLFSEGDKRLGWLLTFASSSLEDEDTRKVYSCIDLYFVSQDGSTFKSKYKFRP 86
            ++ + G++   E  ++ GWL+     +L                             ++P
Sbjct: 1    MDLRFGFERLKEPGEKTGWLINMHPVAL----------------------------PYKP 32

Query: 87   YFYAATKEKMEMDVEAYLRRRYESQIADIEILEKEDLDLKNHLSGLHKSYLKISFDTVQQ 146
            YFY AT++  E +V ++L ++++ +IA +E + KEDLDL NHL GL ++Y+++SF TV+ 
Sbjct: 33   YFYIATRKGCEREVSSFLSKKFQGKIAKVETVPKEDLDLPNHLVGLKRNYIRLSFHTVED 92

Query: 147  LMDVKKDLLHVVERNQAKFDAAEAYESILTG------------KREQRPQDFLDCIVDLR 194
            L+ V+K++   V++N+ +  A++AY ++L+             +  ++  D LD IVD+R
Sbjct: 93   LVKVRKEISPAVKKNREQDHASDAYTALLSSVLQRGGVITDEEETSKKIADQLDNIVDMR 152

Query: 195  EYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLLE--KRVDLLQRAEVHVCAFDIETTKLP 252
            EYDVPYHIR +ID  +    WY+V        +E  +R DL++R +  V AFDIETTKLP
Sbjct: 153  EYDVPYHIRLSIDLKIHVAHWYNVRYRGNAFPVEITRRDDLVERPDPVVLAFDIETTKLP 212

Query: 253  LKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNVNNEIE 312
            LKFPDA+ D IMMISYM+DGQGYLI NRE V EDIED E+TPKPE+EG F V N  +E  
Sbjct: 213  LKFPDAETDQIMMISYMIDGQGYLITNREIVSEDIEDFEFTPKPEYEGPFCVFNEPDEAH 272

Query: 313  LLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDKNQGECRAKF 372
            L++ WF H+QE KP I VTYNGD+FDWPF+E RAA HG  M +E+GFQ D +QGE +A  
Sbjct: 273  LIQRWFEHVQETKPTIMVTYNGDFFDWPFVEARAAVHGLSMQQEIGFQKD-SQGEYKAPQ 331

Query: 373  ACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQMMASYSVS 432
              H+DC  WVKRDSYLP GS  LKA  KAKLGYDP+E++PEDM R A E+PQ +A+YSVS
Sbjct: 332  CIHMDCLRWVKRDSYLPVGSHNLKAAAKAKLGYDPVELDPEDMCRMATEQPQTLATYSVS 391

Query: 433  DAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVICPNKHQ 492
            DAVATYYLYM YVHPFIF+L TIIPM PDEVLRKGSGTLCE LLMVQA+ AN+I PNK +
Sbjct: 392  DAVATYYLYMKYVHPFIFALCTIIPMEPDEVLRKGSGTLCEALLMVQAFHANIIFPNKQE 451

Query: 493  SDPEKFYRN-HLLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQLLNNLDRDLQYA 551
             +  K   + H+L+SETY+GGHVE LESGVFRSD+P  F+++P+A++ LL  +++ L++A
Sbjct: 452  QEFNKLTDDGHVLDSETYVGGHVEALESGVFRSDIPCRFRMNPAAFDFLLQRVEKTLRHA 511

Query: 552  IKVEGKMDLESVSNYDEVKNAIMEKLLRLQEEPIREECPLIYHLDVAAMYPNIILTNRLQ 611
            ++ E K+ +E V+N++EV + I  KL  L++ P R ECPLIYHLDV AMYPNIILTNRLQ
Sbjct: 512  LEEEEKVPVEQVTNFEEVCDEIKSKLASLKDVPSRIECPLIYHLDVGAMYPNIILTNRLQ 571

Query: 612  PPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYYHLKKQIESE-----FVD 666
            P ++V +  C ACDFN+PG  C RK+ W WRGE     RS+Y+ ++ Q+ESE     F +
Sbjct: 572  PSAMVDEATCAACDFNKPGANCQRKMAWQWRGEFMPASRSEYHRIQHQLESEKFPPLFPE 631

Query: 667  GTNGHLSKSFLDLPKMEQQSRLKDRLKKYCQKAYKRVLDKPVTELREAGICMRENSFYVD 726
            G     +++F +L + EQ    K RL  YC+KAYK++    V E R   IC RENSFYVD
Sbjct: 632  GP----ARAFHELSREEQAKYEKRRLADYCRKAYKKIHITKVEE-RLTTICQRENSFYVD 686

Query: 727  TVRSFRDRRYEYKGLNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHKCILNSFY 786
            TVR+FRDRRYE+KGL+KVWK KLS A   G++ +++  ++M VLYDSLQLAHKCILNSFY
Sbjct: 687  TVRAFRDRRYEFKGLHKVWKKKLSAAVEVGDAAEVKRCKNMEVLYDSLQLAHKCILNSFY 746

Query: 787  GYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLPGSFPENF 846
            GYVMRKGARWYSMEMAG+V +TGA II  AR LIE+IG+PLELDTDGIWCVLP SFPENF
Sbjct: 747  GYVMRKGARWYSMEMAGIVCFTGANIITQARELIEQIGRPLELDTDGIWCVLPNSFPENF 806

Query: 847  TFKTKDLKK-KLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEFEVDGP 905
             FKT ++KK K+TISYP  MLN+ V    TNDQYQ L +P S TY T SE SI FEVDGP
Sbjct: 807  VFKTTNVKKPKVTISYPGAMLNIMVKEGFTNDQYQELAEPSSLTYVTRSENSIFFEVDGP 866

Query: 906  YKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFLHG 965
            Y AMILPASKEEG  +KKRYAVFN+DG+LAELKGFE+KRRGEL+LIK+FQ+ +F+ FL G
Sbjct: 867  YLAMILPASKEEGKKLKKRYAVFNEDGSLAELKGFEVKRRGELQLIKIFQSSVFEAFLKG 926

Query: 966  STIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLADYGEQKSCAVTT 1025
            ST+EE Y +VA VA+ WLD+L ++  ++ DSEL + ISE+ +MS+ L DYGEQKS +++T
Sbjct: 927  STLEEVYGSVAKVADYWLDVLYSKAANMPDSELFELISENRSMSRKLEDYGEQKSTSIST 986

Query: 1026 ARRLSDFLGDTMVKDKGLRCQYIVACEPQGTPVSERAVPVAIFETDAEIMKFYLRKWCKT 1085
            A+RL++FLGD MVKD GL C+YI++ +P+G+PV+ERA+P+AIF+ +  + K +LRKW K+
Sbjct: 987  AKRLAEFLGDQMVKDAGLSCRYIISRKPEGSPVTERAIPLAIFQAEPTVRKHFLRKWLKS 1046

Query: 1086 SS--DVGIRSIVDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLYKKVREKED 1143
            SS  D  IR+I+DW YY +RL SAIQKIITIPAA+Q+V NPVPRV HPDWL+KK+ EK D
Sbjct: 1047 SSLQDFDIRAILDWDYYIERLGSAIQKIITIPAALQQVKNPVPRVKHPDWLHKKLLEKND 1106

Query: 1144 KFRQRKLVDIFSSLKKDDFLNKTCNAETNLMDENVEDLEDFPKKRRNSVNGPRPIVRCFE 1203
             ++Q+K+ ++F+   +         A  +    +  D+EDF       V  P P      
Sbjct: 1107 VYKQKKISELFTLEGRRQV--TMAEASEDSPRPSAPDMEDF-----GLVKLPHPAA---P 1156

Query: 1204 VNNEQKTVKTTDQVDSLRQQLEPS----EVSDQQPSSQNAIDTENIDRIVDYKGWLELKK 1259
            V  ++K V    Q +S  Q L P+    E+  Q P    A+ T   + +V    WL   K
Sbjct: 1157 VTVKRKRVLWESQEES--QDLTPTVPWQEILGQPP----ALGTSQEEWLV----WLRFHK 1206

Query: 1260 RKW----KDNLDRRKKQKLGSLRASHQANGVSESLGDMINHKEAQRRTGVGSYFRRQETA 1315
            +KW    +  L RRK+Q+L S     +   + +              TG+GS+ RR   +
Sbjct: 1207 KKWQLQARQRLARRKRQRLESAEGVLRPGAIRDGPA-----------TGLGSFLRRTARS 1255

Query: 1316 MTRCHWQIIQLVPSSQSGVFLAWVVVEGIMVRIPITVPRLFYLNSKDPIVEKFPG-RRVN 1374
            +    WQI+Q+  +SQ+G+F  W +V   +  I +++PR+FY+N +    E+    R+VN
Sbjct: 1256 ILDLPWQIVQISETSQAGLFRLWALVGSDLHCIRLSIPRVFYVNQRVAKAEEGASYRKVN 1315

Query: 1375 KTLPHGRRSFNLIEVMIDEDQFRKESKKLAALLADPEVE 1413
            + LP     +NL E  + ED +++   ++ A L+ P++E
Sbjct: 1316 RVLPRSNMVYNLYEYSVPEDMYQEHINEINAELSAPDIE 1354



 Score =  318 bits (814), Expect = 3e-83,   Method: Compositional matrix adjust.
 Identities = 192/609 (31%), Positives = 306/609 (50%), Gaps = 70/609 (11%)

Query: 1442 LARYAHILWISDDGVPDLGGTSEEDECFA---DEVHQPVLTYPGAYRKVSVELKIHHLSV 1498
            L R+ H+LW+S    PDLGG   +D C     D+     +   G Y  V VEL + +L+V
Sbjct: 1607 LQRHNHLLWLSPTARPDLGGKEADDNCLVMEFDDQATVEINSSGCYSTVCVELDLQNLAV 1666

Query: 1499 NALLKSNQVNEMEGGGLFGFDQD----------MNSGPYNNELCGFDETTSSAPAFRVVK 1548
            N +L+S+ VN+MEG    G   D          +  G   +    +DET   +  FR++K
Sbjct: 1667 NTILQSHHVNDMEGADSMGISFDVIQQASLEDMITGGQAASAPASYDETALCSNTFRILK 1726

Query: 1549 QLIQRCLTDAVTSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEF 1608
             ++   + +     N++AD  + H YRWL SP S LHDP LHR LH +M+K+F  L+AEF
Sbjct: 1727 SMVVGWVKEITQYHNIYADNQVMHFYRWLRSPSSLLHDPALHRTLHNMMKKLFLQLIAEF 1786

Query: 1609 RKLGATIIFANFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLF 1668
            ++LG+++I+ANF+++I+ T K  +  A AY + +  ++ ++E F  + +     W  LL+
Sbjct: 1787 KRLGSSVIYANFNRIILCTKKRRVEDAIAYVEYITSSIHSKETFHSLTISFSRCWEFLLW 1846

Query: 1669 MDQYNYGGIPARADESLD---DDSQV-------------------------------DIV 1694
            MD  NYGGI  +    +     DSQ                                D++
Sbjct: 1847 MDPSNYGGIKGKVSSRIHCGLQDSQKAGGAEDEQENEDDEEERDGEEEEEAEESNVEDLL 1906

Query: 1695 -SSWNIAEYLPK--EIQDHFVLVVSEFMYIPWKHAQKLAASRASLQEGSSCTPSITVAAA 1751
             ++WNI ++LP+    Q++F+++VS ++   + H  K    R++   GS+       +  
Sbjct: 1907 ENNWNILQFLPQAASCQNYFLMIVSAYIVAVY-HCMKDGLRRSA--PGSTPVRRRGASQL 1963

Query: 1752 ENFESHIVQYVKGEIS---SYFTGKLLSIVRDAIHHMKKMNNDQHNSPGVMQT-----AA 1803
                   V  + G I+    Y   +L          ++K      NS  + +       +
Sbjct: 1964 SQEAEGAVGALPGMITFSQDYVANELTQSFFTITQKIQKKVTGSRNSTELSEMFPVLPGS 2023

Query: 1804 NIHKVDAPLEFIKHVCAAFALDQNVQHDVLVMRKNLLKYVRVREFAPEAEFRDPCPSFIL 1863
            ++   +  LEFIK+VC   +LD N+ + V  + ++LL+ V V EF+ EA+FRDPC S++L
Sbjct: 2024 HLLLNNPALEFIKYVCKVLSLDTNITNQVNKLNRDLLRLVDVGEFSEEAQFRDPCRSYVL 2083

Query: 1864 PNVICSYCNDCRDLDLCRDM------ALLAQDWHCAMPQCGQPYDREVMENALLQIVRQR 1917
            P VIC  CN CRDLDLC+D       A+L Q W C+   C  PYD   +E  L+++++++
Sbjct: 2084 PEVICRSCNFCRDLDLCKDSSFSEDGAVLPQ-WLCS--NCQAPYDSSAIEMTLVEVLQKK 2140

Query: 1918 ERLYHLQDLVCIRCNQVKAAHLAEQCACAGSFRCKEDASDFRSKMQIFLNIANRQGFQLL 1977
               + LQDLVC++C  VK   +   C+CAG F        F  ++ IF NIA   G   L
Sbjct: 2141 LMAFTLQDLVCLKCRGVKETSMPVYCSCAGDFALTIHTQVFMEQIGIFRNIAQHYGMSYL 2200

Query: 1978 QECTSWILE 1986
             E   W+L+
Sbjct: 2201 LETLEWLLQ 2209


>gi|355786672|gb|EHH66855.1| hypothetical protein EGM_03921 [Macaca fascicularis]
          Length = 2765

 Score = 1398 bits (3619), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 732/1510 (48%), Positives = 983/1510 (65%), Gaps = 159/1510 (10%)

Query: 25   EELEAKLGYDLFSEGDKRLGWLLTFASSSLEDEDTRKVYSCIDLYFVSQDGSTFKSKYKF 84
            ++++ + G++   E  ++ GWL+    + + DED R V S +D YF+  DGS FK    +
Sbjct: 383  DKMDLRFGFERLKEPGEKTGWLINMHPTEILDEDKRLV-SAVDYYFIQDDGSRFKVALPY 441

Query: 85   RPYFYAATKEKMEMDVEAYLRRRYESQIADIEILEKEDLDLKNHLSGLHKSYLKISFDTV 144
            +PYFY AT++  E +V ++L ++++ +IA +E + KEDLDL NHL GL ++Y+K+SF TV
Sbjct: 442  KPYFYIATRKGCEREVSSFLSKKFQGKIAKVETVPKEDLDLPNHLVGLKRNYIKLSFHTV 501

Query: 145  QQLMDVKKDLLHVVERNQAKFDAAEAYESILTG------------KREQRPQDFLDCIVD 192
            + L+ V+K++   V++N+ +  A++AY ++L+             +  ++  D LD IVD
Sbjct: 502  EDLVKVRKEISPAVKKNREQDHASDAYTALLSSVLQRGGVITDEEETSKKIADQLDNIVD 561

Query: 193  LREYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLLE--KRVDLLQRAEVHVCAFDIETTK 250
            +REYDVPYHIR +ID  +    WY+V        +E  +R DL++R +  V AFDIETTK
Sbjct: 562  MREYDVPYHIRLSIDLKIHVAHWYNVRYRGNAFPVEITRRDDLVERPDPVVLAFDIETTK 621

Query: 251  LPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNVNNE 310
            LPLKFPDA+ D IMMISYM+DGQGYLI NRE V EDIED E+TPKPE+EG F V N  +E
Sbjct: 622  LPLKFPDAETDQIMMISYMIDGQGYLITNREIVSEDIEDFEFTPKPEYEGPFCVFNEPDE 681

Query: 311  IELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDKNQGECRA 370
              L++ WF H+QE KP I VTYNGD+FDWPF+E RAA HG  M +E+GFQ D +QGE +A
Sbjct: 682  AHLIQRWFEHVQETKPTIMVTYNGDFFDWPFVEARAAVHGLSMQQEIGFQKD-SQGEYKA 740

Query: 371  KFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQ------ 424
                H+DC  WVKRDSYLP GS  LKA  KAKLGYDP+E++PEDM R A E+PQ      
Sbjct: 741  PQCIHMDCLRWVKRDSYLPVGSHNLKAAAKAKLGYDPVELDPEDMCRMATEQPQARKPHP 800

Query: 425  ----------------------------------------MMASYSVSDAVATYYLYMTY 444
                                                     +A+YSVSDAVATYYLYM Y
Sbjct: 801  ASLCCRVHACMPARSTQQAVSPGHTCFVLCPSPYCVCGRLTLATYSVSDAVATYYLYMKY 860

Query: 445  VHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVICPNKHQSDPEKFYRN-HL 503
            VHPFIF+L TIIPM PDEVLRKGSGTLCE LLMVQA+ AN+I PNK + +  K   + H+
Sbjct: 861  VHPFIFALCTIIPMEPDEVLRKGSGTLCEALLMVQAFHANIIFPNKQEQEFNKLTDDGHV 920

Query: 504  LESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQLLNNLDRDLQYAIKVEGKMDLESV 563
            L+SETY+GGHVE LESGVFRSD+P  F+++P+A++ LL  +++ L++AI+ E K+ +E V
Sbjct: 921  LDSETYVGGHVEALESGVFRSDIPCRFRMNPAAFDFLLQRVEKTLRHAIEEEEKVPVEQV 980

Query: 564  SNYDEVK-------------------------------------------NAIMEKLLRL 580
            +N++EV                                            + I  KL  L
Sbjct: 981  TNFEEVTVREAGRASPCLVPSSQTASFSSTFIVHLLRVMLWTDDTGSLVCDEIKSKLASL 1040

Query: 581  QEEPIREECPLIYHLDVAAMYPNIILTNRLQPPSIVTDEVCTACDFNRPGKTCLRKLEWV 640
            ++ P R ECPLIYHLDV AMYPNIILTNRLQP ++V +  C ACDFN+PG  C RK+ W 
Sbjct: 1041 KDVPSRIECPLIYHLDVGAMYPNIILTNRLQPSAMVDEATCAACDFNKPGANCQRKMAWQ 1100

Query: 641  WRGEIFMGKRSDYYHLKKQIESE-----FVDGTNGHLSKSFLDLPKMEQQSRLKDRLKKY 695
            WRGE     RS+Y+ ++ Q+ESE     F +G     +++F +L + EQ    K RL  Y
Sbjct: 1101 WRGEFMPASRSEYHRIQHQLESEKFPALFPEGP----ARAFHELSREEQAKYEKRRLADY 1156

Query: 696  CQKAYKRVLDKPVTELREAGICMRENSFYVDTVRSFRDRRYEYKGLNKVWKGKLSEAKAS 755
            C+KAYK++    V E R   IC RENSFYVDTVR+FRDRRYE+KGL+KVWK KLS A   
Sbjct: 1157 CRKAYKKIHITKVEE-RLTTICQRENSFYVDTVRAFRDRRYEFKGLHKVWKKKLSAAVEV 1215

Query: 756  GNSIKIQEAQDMVVLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQN 815
            G++ +++  ++M VLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAG+V +TGA II  
Sbjct: 1216 GDAAEVKRCKNMEVLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGIVCFTGANIITQ 1275

Query: 816  ARLLIEKIGKPLELDTDGIWCVLPGSFPENFTFKTKDLKK-KLTISYPCVMLNVDVARNN 874
            AR LIE+IG+PLELDTDGIWCVLP SFPENF FKT + KK K+TISYP  MLN+ V    
Sbjct: 1276 ARELIEQIGRPLELDTDGIWCVLPNSFPENFVFKTTNAKKPKVTISYPGAMLNIMVKEGF 1335

Query: 875  TNDQYQTLVDPVSKTYETHSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTL 934
            TNDQYQ L +P S TY T SE SI FEVDGPY AMILPASKEEG  +KKRYAVFN+DG+L
Sbjct: 1336 TNDQYQELAEPSSLTYVTRSENSIFFEVDGPYLAMILPASKEEGKKLKKRYAVFNEDGSL 1395

Query: 935  AELKGFEIKRRGELKLIKVFQAELFDKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIA 994
            AELKGFE+KRRGEL+LIK+FQ+ +F+ FL GST+EE Y +VA VA+ WLD+L ++  ++ 
Sbjct: 1396 AELKGFEVKRRGELQLIKIFQSSVFEAFLKGSTLEEVYGSVAKVADYWLDVLYSKAANMP 1455

Query: 995  DSELIDYISESSTMSKSLADYGEQKSCAVTTARRLSDFLGDTMVKDKGLRCQYIVACEPQ 1054
            DSEL + ISE+ +MS+ L DYGEQKS +++TA+RL++FLGD MVKD GL C+YI++ +P+
Sbjct: 1456 DSELFELISENRSMSRKLEDYGEQKSTSISTAKRLAEFLGDQMVKDAGLSCRYIISRKPE 1515

Query: 1055 GTPVSERAVPVAIFETDAEIMKFYLRKWCKTSS--DVGIRSIVDWSYYKQRLSSAIQKII 1112
            G+PV+ERA+P+AIF+ +  + K +LRKW K+SS  D  IR+I+DW YY +RL SAIQKII
Sbjct: 1516 GSPVTERAIPLAIFQAEPMVRKHFLRKWLKSSSLQDFDIRAILDWDYYIERLGSAIQKII 1575

Query: 1113 TIPAAMQKVSNPVPRVVHPDWLYKKVREKEDKFRQRKLVDIFSSLKKDDFLNKTCNAETN 1172
            TIPAA+Q+V NPVPRV HPDWL+KK+ EK D ++Q+K+ ++F+   +         A  +
Sbjct: 1576 TIPAALQQVKNPVPRVKHPDWLHKKLLEKNDVYKQKKISELFTLEGRRQV--TMAEASED 1633

Query: 1173 LMDENVEDLEDFPKKRRNSVNGPRPIVRCFEVNNEQKTVKTTDQVDSLRQQLEPS----E 1228
                +  D+EDF       V  P P      V  ++K V    Q +S  Q L P+    E
Sbjct: 1634 SPRPSAPDMEDF-----GLVKPPHPAA---PVAVKRKRVLWESQEES--QDLTPTVPWQE 1683

Query: 1229 VSDQQPSSQNAIDTENIDRIVDYKGWLELKKRKW----KDNLDRRKKQKLGSLRASHQAN 1284
            +  Q P    A+ T   + +V    WL   K+KW    +  L RRK+Q+L S     +  
Sbjct: 1684 ILGQPP----ALGTTQEEWLV----WLRFHKKKWQLQARQRLARRKRQRLESAEGVLRPG 1735

Query: 1285 GVSESLGDMINHKEAQRRTGVGSYFRRQETAMTRCHWQIIQLVPSSQSGVFLAWVVVEGI 1344
             + +              TG+GS+ RR   ++    WQI+Q+  +SQ+G+F  W ++   
Sbjct: 1736 AIRDGPA-----------TGLGSFLRRTARSILDLPWQIVQISETSQAGLFRLWALIGSD 1784

Query: 1345 MVRIPITVPRLFYLNSKDPIVEKFPG-RRVNKTLPHGRRSFNLIEVMIDEDQFRKESKKL 1403
            +  I +++PR+FY+N +    E+    R+VN+ LP     +NL E  + ED +++   ++
Sbjct: 1785 LHCIRLSIPRVFYVNQRVAKAEEGTSYRKVNRVLPRSNVVYNLYEYSVPEDMYQEHINEI 1844

Query: 1404 AALLADPEVE 1413
             A L+ P++E
Sbjct: 1845 NAELSAPDIE 1854



 Score =  296 bits (759), Expect = 7e-77,   Method: Compositional matrix adjust.
 Identities = 197/665 (29%), Positives = 310/665 (46%), Gaps = 133/665 (20%)

Query: 1442 LARYAHILWISDDGVPDLGGTSEEDECFA---DEVHQPVLTYPGAYRKVSVELKIHHLSV 1498
            L R+ H+LW+S    PDLGG   +D C     D+     +   G Y  V VEL + +L+V
Sbjct: 2107 LHRHNHLLWLSPTARPDLGGKEADDNCLVMEFDDQATVEINSSGCYSTVCVELDLQNLAV 2166

Query: 1499 NALLKSNQVNEMEGGGLFGFDQD----------MNSGPYNNELCGFDETTSSAPAFRVVK 1548
            N +L+S+ VN+MEG    G   D          +  G   +    +DET   +  FR++K
Sbjct: 2167 NTILQSHHVNDMEGADSMGISFDVIQQASLEDMITGGQAASAPASYDETALCSNTFRILK 2226

Query: 1549 QLIQRCLTDAVTSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEF 1608
             ++   + +     N++AD  + H YRWL SP S LHDP LHR LH +M+K+F  L+ EF
Sbjct: 2227 SMVVGWVKEITQYHNIYADNQVMHFYRWLRSPSSLLHDPALHRTLHNMMKKLFLQLITEF 2286

Query: 1609 RKLGATIIFANFSKVIIDTGKFDLSAAKAY------------CD---------------- 1640
            ++LG+++++ANF+++I+ T K  +  A AY            CD                
Sbjct: 2287 KRLGSSVVYANFNRIILCTKKRRVEDAIAYVEYITSRKPEERCDLNELSDSMLSKWKVQI 2346

Query: 1641 ---------------------SLLKALQTRELFEWIELEPVHFWHSLLFMDQYNYGGI-- 1677
                                   L ++  +E+F  + +     W  LL+MD  NYGGI  
Sbjct: 2347 DTRGKKGKLRTRSISFKQCLQCFLYSIHAKEIFHSLTISFSRCWEFLLWMDPSNYGGIKG 2406

Query: 1678 --PARADESLDDDSQV-------------------------------DIVSSWNIAEYLP 1704
               +R    L D  +V                                + ++WNI ++LP
Sbjct: 2407 KVSSRVHHGLQDSQKVQGAEDEQENEDNEEERNGEEEEDAEESSVEDSLENNWNILQFLP 2466

Query: 1705 K--EIQDHFVLVVSEFMYIPWKHAQKLAASRASL------QEGSSCTPSITVAAAENFES 1756
            +    Q +F+++VS ++   + H  K    R++       + G+S        AA     
Sbjct: 2467 QAASCQSYFLMIVSAYIVAVY-HCMKDGLRRSAPGSTPVRRRGASQLSQEAEGAAGALPG 2525

Query: 1757 HIV---QYVKGEIS-SYFTGKLLSIVRDAIHHMKKMNNDQHNSPGVMQ-----TAANIHK 1807
             I     YV  E++ S+FT             ++K      NS  + +       +++  
Sbjct: 2526 MITFSQDYVANELTQSFFT---------ITQKIQKKVTGSRNSTELSEMFPVLPGSHLLL 2576

Query: 1808 VDAPLEFIKHVCAAFALDQNVQHDVLVMRKNLLKYVRVREFAPEAEFRDPCPSFILPNVI 1867
             +  LEFIK+VC   +LD N+ + V  + ++LL+ V V EF+ EA+FRDPC S++LP VI
Sbjct: 2577 NNPALEFIKYVCKVLSLDTNITNQVNKLNRDLLRLVDVGEFSEEAQFRDPCRSYVLPEVI 2636

Query: 1868 CSYCNDCRDLDLCRDM------ALLAQDWHCAMPQCGQPYDREVMENALLQIVRQRERLY 1921
            C  CN CRDLDLC+D       A+L+Q W C+   C  PYD  V+E  L+++++++   +
Sbjct: 2637 CRSCNFCRDLDLCKDSSFSEDGAVLSQ-WLCS--NCQAPYDSSVIEMTLVEVLQKKLMAF 2693

Query: 1922 HLQDLVCIRCNQVKAAHLAEQCACAGSFRCKEDASDFRSKMQIFLNIANRQGFQLLQECT 1981
             LQDL+C++C  VK   +   C+CAG F        F  ++ IF NIA   G   L E  
Sbjct: 2694 TLQDLICLKCRGVKETSMPVYCSCAGGFALTIHTQVFMEQIGIFRNIAQHYGMSYLLETL 2753

Query: 1982 SWILE 1986
             W+L+
Sbjct: 2754 EWLLQ 2758


>gi|330943668|ref|XP_003306241.1| hypothetical protein PTT_19357 [Pyrenophora teres f. teres 0-1]
 gi|311316314|gb|EFQ85671.1| hypothetical protein PTT_19357 [Pyrenophora teres f. teres 0-1]
          Length = 2235

 Score = 1394 bits (3609), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 708/1415 (50%), Positives = 943/1415 (66%), Gaps = 75/1415 (5%)

Query: 27   LEAKLGYDLFSEGDKRLGWLLTFASSSLEDEDTRKVYSCIDLYFVSQDGSTFKSKYKFRP 86
            ++  +G+  F  G KR+GWL+   S+++EDED     + +D YF+ +DG TFK+  ++ P
Sbjct: 55   IDETMGFARFDSGKKRVGWLVNMHSTTVEDEDVPGGRAGVDFYFIGEDGDTFKATLEYDP 114

Query: 87   YFYAATKEKMEMDVEAYLRRRYESQIADIEILEKEDLDLKNHLSGLHKSYLKISFDTVQQ 146
            YF  A K+  E +VE Y +R YE  I +I+ +EKEDL + NHL+G  + +L++SF  V  
Sbjct: 115  YFLLAVKKGREHEVEEYCKRAYEGLIKNIKTIEKEDLSMPNHLTGYRRKFLQLSFANVND 174

Query: 147  LMDVKKDLLHVVERNQAKFDAAEAYESILTG---------------KREQRPQDFLDCIV 191
            L+ V+K +  VVE+N+   +A + Y  +  G               KR     D  D IV
Sbjct: 175  LLAVRKAVNPVVEKNKKNVNAMDTYAEVANGNGAFDFFDNDEYEYEKRFTTTVDASDFIV 234

Query: 192  DLREYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLLEKRVDLLQRAEVHVCAFDIETTKL 251
            D+REYDVPYH+R AID DVR G WY V        ++   D L  A+  V A+DIETTKL
Sbjct: 235  DIREYDVPYHVRVAIDKDVRIGNWYTVEAKHGVITIKCIEDRLTPADPVVMAYDIETTKL 294

Query: 252  PLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNVNNEI 311
            PLKFPDA  D IMMISYM+DGQG+LI NRE V EDI+D EYTPKPE++G F + N  +E 
Sbjct: 295  PLKFPDAAIDQIMMISYMIDGQGFLITNREIVSEDIQDFEYTPKPEYQGPFMIFNEPDEK 354

Query: 312  ELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDKNQGEC-RA 370
             LL  +F H++  +P + VTYNGD+FDWPF+E R++  G  M +E+GF+  KN  +  ++
Sbjct: 355  ALLERFFEHIKIARPTVIVTYNGDFFDWPFVEARSSVQGIDMYQEIGFR--KNSEDIYQS 412

Query: 371  KFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQMMASYS 430
             +  H+D F WV RDSYLPQGS+GLKAV  AKLGYDP E++PE M  +A E+PQ +A YS
Sbjct: 413  DYCAHMDAFCWVSRDSYLPQGSRGLKAVCLAKLGYDPDELDPELMTPYAAERPQTLAEYS 472

Query: 431  VSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVICPNK 490
            VSDAVATYYLYM YVHPFIF+L  I+P+ PD+ LRKG+GTLCEMLLMVQAY+  ++ PNK
Sbjct: 473  VSDAVATYYLYMKYVHPFIFALCKILPLGPDDALRKGTGTLCEMLLMVQAYQKGIVLPNK 532

Query: 491  HQSDPEKFYRNHLLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQLLNNLDRDLQY 550
            HQ+  E F+  HLLESETY+GGHVE LE+GVFRSD+  +F +DP+A ++LLN+LD  L++
Sbjct: 533  HQAPKEAFWEGHLLESETYVGGHVEALEAGVFRSDIAYNFAVDPTAIDELLNDLDAALKF 592

Query: 551  AIKVEGKMDLESVSNYDEVKNAIMEKLLRLQEEPIREECPLIYHLDVAAMYPNIILTNRL 610
            +I+VE K  +E V+NYDE+K  I+EKLL+L+E P R E PLIYHLDVA+MYPNI+ T RL
Sbjct: 593  SIEVEEKKKMEDVTNYDEIKAEIVEKLLQLKETPNRSERPLIYHLDVASMYPNIMTTYRL 652

Query: 611  QPPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYYHLKKQIESEFVDGTNG 670
            QP S++ +  C ACDFNRPGKTC R++ W WRGE    KR +Y  ++  +E+E   G   
Sbjct: 653  QPDSMIKEGNCAACDFNRPGKTCDRRMPWAWRGEYLPAKRDEYNMVRNALENEQFPGRFP 712

Query: 671  HLSK-SFLDLPKMEQQSRLKDRLKKYCQKAYKRVLDKPVTELREAGICMRENSFYVDTVR 729
            +  K +F DL   EQ + ++ RL  Y +K Y +V D    E REA IC REN FYVDTV 
Sbjct: 713  NSPKRTFQDLSADEQATLIRKRLTDYSKKIYHKVHDATTIE-REAIICQRENPFYVDTVS 771

Query: 730  SFRDRRYEYKGLNKVWKGKLSEAKASGN-SIKIQEAQDMVVLYDSLQLAHKCILNSFYGY 788
             FRDRRY++KG  KVWKGK    KA+G  + +I++A+ M++L+DS+QLAHK ILNSFYGY
Sbjct: 772  GFRDRRYDFKGKQKVWKGKTEALKAAGAPASEIEDAKKMIILFDSMQLAHKVILNSFYGY 831

Query: 789  VMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLPGSFPENFTF 848
            VMRKG+RWYS+EMAGV   TGA+IIQ AR L+E+IG+PLELDTDGIW +LP +FPENF+F
Sbjct: 832  VMRKGSRWYSLEMAGVTCLTGARIIQLARSLVERIGRPLELDTDGIWAILPATFPENFSF 891

Query: 849  KTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEFEVDGPYKA 908
            K  +  KKLTISYPC MLN  V    TN  Y+TLVDP +  YE HS+ SI FEVDGPYKA
Sbjct: 892  KLSN-GKKLTISYPCTMLNHLVHAQYTNHDYETLVDPETFRYEKHSDNSIFFEVDGPYKA 950

Query: 909  MILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFLHGSTI 968
            MILP SKEE   +KKRYAVFN DG+LAELKGFE+KRRGELKLIK FQA++F  FL G+T+
Sbjct: 951  MILPTSKEEDKNLKKRYAVFNHDGSLAELKGFEVKRRGELKLIKNFQAQIFKFFLEGTTL 1010

Query: 969  EECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLADYGEQKSCAVTTARR 1028
            EE Y AVA VANRWLD+LD +G  +AD ELID I E+  M+K+L +YG QKS A+TTA+R
Sbjct: 1011 EETYGAVAKVANRWLDILDTRGATLADEELIDLIVENKNMTKTLEEYGTQKSTAITTAKR 1070

Query: 1029 LSDFLGDTMVKDKGLRCQYIVACEPQGTPVSERAVPVAIFETDAEIMKFYLRKWCKTS-S 1087
            L++FLG+ MVKDKGL C+YI++  P+  PV+ERAVP+AIF  +  + +++LRKW +    
Sbjct: 1071 LAEFLGEQMVKDKGLNCKYIISKTPRNAPVTERAVPLAIFSAEESVKRYFLRKWLRDDPG 1130

Query: 1088 DVGIRSIVDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLYKKVREKEDKFRQ 1147
            ++ IR+I+DW YY++RL+S IQK+ITIPAA QKV NPVPRV HPDWL +++R+KEDKF+Q
Sbjct: 1131 EMDIRTILDWDYYRERLASVIQKLITIPAAYQKVRNPVPRVPHPDWLNRRIRQKEDKFQQ 1190

Query: 1148 RKLVDIFSSLKKDDFLNKTCNAETNLMDENVEDLEDFPKKRRNSVNGPRPIVRCFEVNNE 1207
             K+ D+FS   K    N   N   N   +   DLEDF   +                N  
Sbjct: 1191 TKMTDMFS---KKVLTNGNANVANN---KGSGDLEDFGSSKLTQ-------------NQS 1231

Query: 1208 QKTVKTTDQVDSLRQQLEPSEVSDQQPSSQNAIDTENIDRIVDYKGWLELKKRKWKDNLD 1267
            Q       ++ + R++ EP+ V    P +       +ID+  DY GWL  +K+KWK   +
Sbjct: 1232 QMKKGIVTKMVAKRKEPEPA-VPIVDPYAALPKVMPSIDK--DYSGWLMYQKQKWKIQKE 1288

Query: 1268 RRKKQKLGSLRASHQANGVSESLGDMINHKEAQRRTGVGSYFRRQETAMTRCHWQIIQLV 1327
             RK+++                   +   K       +GS+FR Q  ++    WQ++QL 
Sbjct: 1289 ARKRRR------------------QLFGEKAVDSSDAIGSFFRNQAQSLYISTWQLVQLR 1330

Query: 1328 PSSQSGVFLAWVVVEGIMVRIPITVPRLFYLNSKDPIVEKFPG---------RRVNKTLP 1378
            P+   G   A+V+++  +  + I VPR  YLN +    E  P          + VN TLP
Sbjct: 1331 PTETPGEVRAFVLIDKKIHALKIIVPRQLYLNLRS---EDLPDVSISGCSVEKVVNHTLP 1387

Query: 1379 HGRRSFNLIEVMIDEDQFRKESKKLAALLADPEVE 1413
            +G  S +L ++ + E+ +  E+K ++AL +   VE
Sbjct: 1388 NGHPSIHLFKLQMTEETYVNEAKAISALFSHSSVE 1422



 Score =  233 bits (595), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 165/640 (25%), Positives = 302/640 (47%), Gaps = 83/640 (12%)

Query: 1408 ADPEVEVLGWQQNAAKIGMQRCAASSQWFNERISLARYAHI------------------- 1448
            +D ++  LGWQ   A+  +        W    + LARY  I                   
Sbjct: 1618 SDKQLPPLGWQAFIARRLVGHYLDLGSWVAHLLELARYGDIPLCNLESNDPRFLIDVAYA 1677

Query: 1449 ---------LWISDDGVPDLGGTSEEDECFA--DEVHQPVLTYPGAYRKVSVELKIHHLS 1497
                     LW S    PD  G  E+D+  A  + V  P +  PG Y  V +++ + +L+
Sbjct: 1678 RRLQKDRVILWWSGQAKPDHAGY-EKDDVLAPLETVEMPSINNPGTYSSVCIDINVRNLA 1736

Query: 1498 VNALLKSNQVNEMEGGGLFGFDQDMNSGP-YNNELCG----FDETTSSAPAFRVVKQLIQ 1552
            +N +L S+ VNE+EG     F    N  P Y++   G    + +   ++    V++++++
Sbjct: 1737 INTILSSSLVNELEGADSVSF----NPAPSYDSTNDGSNVIYSDNAFASAGITVLREMVK 1792

Query: 1553 RCLTDAVTSGNVF--ADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEFRK 1610
                +AV + + F  AD ++QHL RW+ SP S L+D  LH  +  + +K    L+ +F++
Sbjct: 1793 DWWVEAVQANHGFSMADVMVQHLVRWVSSPGSFLYDRSLHYYVQMMSKKTLQQLMTDFKR 1852

Query: 1611 LGATIIFANFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLFMD 1670
            +G+ I+FA+ +++++ T K ++  A +Y   ++K ++++ LF+++ELE   +W  L++ D
Sbjct: 1853 VGSHIVFASPNRLLLQTTKAEVGNAYSYSQYIIKTIKSKPLFQFMELEIKEYWDYLVWYD 1912

Query: 1671 QYNYGGIPARADESLDDDSQVDIVSSWNIAEYLPKEIQDHFVLVVSEFMYIPWKHAQKLA 1730
            ++NYGG    ++ + D++  V+ +  W +A++LP + Q  F   V EF  I   HA+K  
Sbjct: 1913 EFNYGG-KGCSEVTEDENQPVENIMCWQLAQFLPPKFQPTFNDWVVEF--IELMHARK-- 1967

Query: 1731 ASRASLQEGSSCTP--------SITVAAAENFESHIVQYVK--GEISSYFTGKLLSIVRD 1780
              R  + E  S TP         +TV   E  +     + K   +  + F  K  + + D
Sbjct: 1968 --RPQITEDGS-TPRATQIPLRPLTVDPNEQTQLLPKTFTKPLSKQMNVFAKKQHAEILD 2024

Query: 1781 AIHHMKKMNNDQHNSPGVMQTAANIHKVDAPLEFIKHVCAAFALDQNVQHDVLVMRKNLL 1840
             +     +  +    PG     +++   +A L+ +K +    +LD+ +  +   +RK LL
Sbjct: 2025 PLFASDYVFPEL---PG-----SHLKLNNAVLQLVKSIMQVLSLDRAISLEARALRKELL 2076

Query: 1841 KYVRVREFAPEAEFRDPCPSFILPNVICSYCNDCRDLDLCRDMALLA------------- 1887
                ++EF+ EA F +P  + ++  VIC  C   RDLDLCRD +LL              
Sbjct: 2077 NLFDIKEFSAEATFVNPSAALVVRGVICDECTSSRDLDLCRDSSLLPVVVSNNSDAAPVL 2136

Query: 1888 QDWHCAMPQCGQPYDREVMENALLQIVRQRERLYHLQDLVCIRCNQVKAAHLAEQCACAG 1947
              W C    C   YD+  +E  L+  V++    +  QDL C +C ++++    E CACAG
Sbjct: 2137 PKWKCD--NCDSSYDKRRIEEQLVGEVQKMVLEWCTQDLKCAKCKRLRSNEFMEHCACAG 2194

Query: 1948 SFRCKEDASDFRSKMQIFLNIANRQGFQLLQECTSWILEV 1987
             +   ++  + + +  ++ N+A      +L+      LE 
Sbjct: 2195 EWVATKNRQEMKKRAMVYGNVAKFYTLGMLEAVVEECLEA 2234


>gi|326477862|gb|EGE01872.1| DNA polymerase epsilon catalytic subunit A [Trichophyton equinum CBS
            127.97]
          Length = 2180

 Score = 1393 bits (3606), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 723/1481 (48%), Positives = 980/1481 (66%), Gaps = 85/1481 (5%)

Query: 27   LEAKLGYDLFSEGDKRLGWLLTFASSSLEDEDTRKVYSCIDLYFVSQDGSTFKSKYKFRP 86
            ++  +G+  +  G KR+GWL    S+++ED       + ++ YF+ ++G +FK+  ++ P
Sbjct: 53   IDETMGFARYEAGKKRIGWLCNMHSTTIEDSKVPGGRAAVEFYFLEENGGSFKAAVEYDP 112

Query: 87   YFYAATKEKMEMDVEAYLRRRYESQIADIEILEKEDLDLKNHLSGLHKSYLKISFDTVQQ 146
            YF  ATK   E +VE + +R +E  +  ++++EKEDL + NHL G  + +L++SF  V  
Sbjct: 113  YFLIATKRGHEAEVEEWCKRTFEELVKGVKLVEKEDLKMPNHLLGYKRKFLQLSFANVSD 172

Query: 147  LMDVKKDLLHVVERNQAKFDAAEAYESILTG-------------KREQRPQDFLDCIVDL 193
            L+ V+K +  +  +N+ K +A + Y  + +              + +   QD  D IVD+
Sbjct: 173  LLAVRKTIFPIAIKNRKKVNAMDTYAELASANAGFDLFDDDSNNRGQNSLQDAADYIVDI 232

Query: 194  REYDVPYHIRFAIDNDVRCGQWYDV-SISS--TGPLLEKRVDLLQRAEVHVCAFDIETTK 250
            REYDVPYH+R +ID D+R G+WY V SI    T   LE+R   LQRA+  V A+DIETTK
Sbjct: 233  REYDVPYHVRVSIDKDIRIGKWYTVQSIHGLITLTCLEER---LQRADPVVLAYDIETTK 289

Query: 251  LPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNVNNE 310
            LPLKFPDA  D IMMISYM+DG+GYLI NRE V EDI D EYTPKPE+ G F + N  +E
Sbjct: 290  LPLKFPDAAIDQIMMISYMIDGRGYLITNREIVSEDINDFEYTPKPEYPGPFTIFNEPDE 349

Query: 311  IELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDKNQGEC-R 369
              +L  +F+H++E KP + VTYNGD+FDWPF+E RA+  G  M  E+GF+  KN  +  +
Sbjct: 350  KAVLERFFSHVKEAKPSVMVTYNGDFFDWPFVEARASVQGIDMYAEIGFR--KNSEDIYQ 407

Query: 370  AKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQMMASY 429
            + +  H+D F+WV RDSYLPQGS+GLKAVT AKLGYDP E++PE M R+A E+PQ +A Y
Sbjct: 408  SDYCAHMDAFSWVNRDSYLPQGSRGLKAVTVAKLGYDPDELDPELMTRYASERPQTLAEY 467

Query: 430  SVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVICPN 489
            SVSDAVATYYLYM YVHPFIFSL TIIP+SPDEVLRKG+GTLCEMLLMVQAY+ N+I PN
Sbjct: 468  SVSDAVATYYLYMKYVHPFIFSLCTIIPLSPDEVLRKGTGTLCEMLLMVQAYQHNIILPN 527

Query: 490  KHQSDPEKFYRNHLLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQLLNNLDRDLQ 549
            KH    E FY  HLL+SETY+GGHVE +E+GVFRSD+P +F ++ SA ++LL +LD  L+
Sbjct: 528  KHTDPNESFYEGHLLDSETYVGGHVESIEAGVFRSDIPVNFTVETSAIDELLRDLDAALE 587

Query: 550  YAIKVEGKMDLESVSNYDEVKNAIMEKLLRLQEEPIREECPLIYHLDVAAMYPNIILTNR 609
            ++I VE K  +E V NY EVK  I E+LL L+  P R E P IYHLDVA+MYPNI+ TNR
Sbjct: 588  FSITVEEKKSMEDVVNYSEVKAQITERLLNLKNCPNRNERPSIYHLDVASMYPNIMTTNR 647

Query: 610  LQPPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYYHLKKQIESE-FVDGT 668
            LQP S++ +  C ACDFNRPGKTC R+L W WRGE    KR +Y  +++ +E+E F   T
Sbjct: 648  LQPDSMIRESDCAACDFNRPGKTCDRRLPWSWRGEFLPAKRDEYNMIRRAVENEKFPGKT 707

Query: 669  NGHLSKSFLDLPKMEQQSRLKDRLKKYCQKAYKRVLDKPVTELREAGICMRENSFYVDTV 728
              H  +SF  L + EQ + +K RL++Y +K Y ++ +    E REA IC REN FYVDTV
Sbjct: 708  KNHPLRSFESLDESEQATIVKKRLQEYSKKIYHKIRETRTIE-REAIICQRENPFYVDTV 766

Query: 729  RSFRDRRYEYKGLNKVWKGKLSEAKASGNS-IKIQEAQDMVVLYDSLQLAHKCILNSFYG 787
            R+FRDRRY++KG  KVWKGK+   K+SG +  +I+EA+ MVVL+DSLQLAHK ILNSFYG
Sbjct: 767  RNFRDRRYDFKGKQKVWKGKVESLKSSGAANSEIEEAKKMVVLFDSLQLAHKVILNSFYG 826

Query: 788  YVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLPGSFPENFT 847
            YVMRKG+RWYSMEMAGV   TGA IIQ AR L+E+IG+PLELDTDGIWC+LPG+FPENF 
Sbjct: 827  YVMRKGSRWYSMEMAGVTCLTGAHIIQMARELVERIGRPLELDTDGIWCMLPGTFPENFV 886

Query: 848  FKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEFEVDGPYK 907
            FK  +  KKL ISYPCVMLN  V    TN QYQTL DP +  Y THS+ SI FEVDGPY+
Sbjct: 887  FKLVN-GKKLAISYPCVMLNHLVHGRFTNHQYQTLSDPSTFKYTTHSDNSIFFEVDGPYR 945

Query: 908  AMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFLHGST 967
            AMILP SKEE   +KKRYAVFN DG+LAELKGFE+KRRGELKLIKVFQ ++F  FL GST
Sbjct: 946  AMILPTSKEEDKNLKKRYAVFNHDGSLAELKGFEVKRRGELKLIKVFQTQIFKFFLEGST 1005

Query: 968  IEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLADYGEQKSCAVTTAR 1027
            +EE Y AVA VANRWLD+LD  G  +AD ELID I E+ +MSK++ +YG QKS ++TTA+
Sbjct: 1006 LEETYGAVAEVANRWLDVLDMHGSTLADEELIDMICENRSMSKTIEEYGSQKSTSITTAK 1065

Query: 1028 RLSDFLGDTMVKDKGLRCQYIVACEPQGTPVSERAVPVAIFETDAEIMKFYLRKWCKT-S 1086
            RL++FLG+ M+KDKGL C+YI++  P+ +P++ERA+PVAIF  +  I +F+LRKW K   
Sbjct: 1066 RLAEFLGEQMIKDKGLNCKYIISAAPRNSPITERAIPVAIFSAEENIKRFFLRKWLKEDP 1125

Query: 1087 SDVGIRSIVDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLYKKVREKEDKFR 1146
             D+  R+I+DW YY +RL S IQK+ITIPAA+QK+SNPVPRV HPDWL +++  KED+F+
Sbjct: 1126 GDMDPRTIIDWDYYLERLGSVIQKLITIPAALQKISNPVPRVAHPDWLQRRINTKEDRFK 1185

Query: 1147 QRKLVDIFSSLKKDDFLNKTCNAETNLMDENVE---DLEDFPKKRRNSVNGPRPIVRCFE 1203
            Q+K+ D+F+        N   N  TN+MD  +    D+ED  ++                
Sbjct: 1186 QKKMTDLFTK-------NPLANISTNIMDHRIPSAGDIEDMIQR---------------- 1222

Query: 1204 VNNEQKTVKTTDQVDSLRQQLEPSEVSDQQPSSQNAIDTENIDRIVDYKGWLELKKRKWK 1263
                QK    +      +++      + Q P +       +ID+  +Y+ WL  +K+KWK
Sbjct: 1223 --GSQKPGTQSGNKLIQKRKAPGDNTTSQDPFASLPPVMPSIDK--NYEDWLRYQKQKWK 1278

Query: 1264 DNLDRRKKQKLGSLRASHQANGVSESLGDMINHKEAQRRTGVGSYFRRQETAMTRCHWQI 1323
                 R +++                   +   K+      +GS+FR Q        WQI
Sbjct: 1279 IQKQARLRRR------------------KLFGAKKTAASDSIGSFFRNQAELTYVNTWQI 1320

Query: 1324 IQLVPSSQSGVFLAWVVVEGIMVRIPITVPRLFYLNSKD---PIVEKFPG---RRVNKTL 1377
            +QL  +S  G   A+V+++  +  I I +PR  ++N KD   P V+  PG   ++VN TL
Sbjct: 1321 LQLRETSSPGEVRAFVLIDRKVHTITIKIPRQIFINFKDVDLPDVD-IPGCSVQKVNHTL 1379

Query: 1378 PHGRRSFNLIEVMIDEDQFRKESKKLAALLADPEVEVLGWQQNAAKI-GMQRCAASSQWF 1436
            P+G  S +L ++ ++E+ + +E+ K++ LL  P VE +  ++    I  + + +   + F
Sbjct: 1380 PNGHPSVHLFQLSMEEEIYLREASKISLLLNHPSVEGVYEKKVPFNIRAVLKLSGEREIF 1439

Query: 1437 NERISLARYAHILWISDDGVPDLGGTSEEDECFADEVHQPV 1477
            +   + +R AHI+  +     D+ G    D+ F + + + V
Sbjct: 1440 SVFSTKSREAHIVTYTKQR--DIQGFPNVDKIFTEALQRKV 1478



 Score =  231 bits (588), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 165/634 (26%), Positives = 294/634 (46%), Gaps = 70/634 (11%)

Query: 1408 ADPEVEVLGWQQNAAKIGMQRCAASSQWFNERISLARYAHI------------------- 1448
            +D E+  LGWQ  AA+  +    A   W N  +  ARY  +                   
Sbjct: 1560 SDNELPPLGWQPYAARQIVMHYLALDSWINHLLGFARYGSVPIGNLEKDDPKHLIDILYA 1619

Query: 1449 ---------LWISDDGVPDLGGTSEEDECFA--DEVHQPVLTYPGAYRKVSVELKIHHLS 1497
                     LW S   +PD GG  E+D      + V    +   GAY  V +EL++ +L+
Sbjct: 1620 RQLEQNNVVLWWSASPLPDHGGY-EKDNILGPLNSVEMTSVNIAGAYSTVCIELEVRNLA 1678

Query: 1498 VNALLKSNQVNEMEGG--GLF-----GFDQDMNSGPYNNELCGFDETTSSAPAFRVVKQL 1550
            +N +L S+ ++++E     L      G  Q ++ G        + +T  SA    V++ +
Sbjct: 1679 INTVLTSSLISDLENNEPALLNPTAPGDQQTISDG----SGVLYSDTAFSAAGILVLRDM 1734

Query: 1551 IQRCLTDAVTSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEFRK 1610
            ++    +A   GN  AD ++QHL RW+ S    L+D  LH+ +  +++K    L+  F++
Sbjct: 1735 VKSWWNEAC-KGNGMADVMVQHLIRWVESADCCLYDHALHQYMQMILKKSLQQLIMAFKR 1793

Query: 1611 LGATIIFANFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLFMD 1670
            +G+ +I+AN +++I+ T K ++  A AY   +L++++ + LF +++++   +W  L++ D
Sbjct: 1794 VGSNVIYANPNRLILQTTKTEVGNAYAYSKYILQSIKEKPLFHFLDIDIKEYWDYLIWYD 1853

Query: 1671 QYNYGGIPARADESLDDDSQ-VDIVSSWNIAEYLPKEIQDHFVLVVSEFMYIPWKHAQKL 1729
            Q+NYGG      E ++ D Q ++ + +W I  +LP  +Q  FV  + E  Y+   H  K 
Sbjct: 1854 QFNYGG--KACQEVVEADKQELEAIMNWQICRFLPTPLQSVFVDWIVE--YVELMHGLKK 1909

Query: 1730 AASRASLQEGSSCTPSITVAAAENFES-HIVQYVKGEISSYFTGKLLSIVR----DAIHH 1784
             A      +G+     +     +  ES  I   +    S     ++  ++R    + +H 
Sbjct: 1910 PAPVNGGADGTPRQTQLPFRPEDESESVEITSVLSQSFSKALKKQVAGLIRRQRDEMLHP 1969

Query: 1785 MKKMNNDQHNSPGVMQTAANIHKVDAPLEFIKHVCAAFALDQNVQHDVLVMRKNLLKYVR 1844
                + D    PG M      H+ +  LE +K++     L ++   +V ++R++LL    
Sbjct: 1970 ELASDYDFPVLPGAMPPK---HERNPTLELVKYLMQVLGLSKHTALEVRLLRRDLLALFD 2026

Query: 1845 VREFAPEAEFRDPCPSFILPNVICSYCNDCRDLDLCRDMALLAQD------------WHC 1892
            +REF+ E +F  P  S +L  +IC  C   RDLDLCRD  LL +             W C
Sbjct: 2027 IREFSDEGKFESPSSSLVLSQIICHNCTMARDLDLCRDPELLPESGTEHKVSTTLPPWTC 2086

Query: 1893 AMPQCGQPYDREVMENALLQIVRQRERLYHLQDLVCIRCNQVKAAHLAEQCACAGSFRCK 1952
              P C   YDR  +E  ++  V+     +  QDL C +C  +      E C+C+G +   
Sbjct: 2087 --PYCSTEYDRLFLEERIIGEVQGLVMEWQAQDLKCAKCAGIMVNPFMEHCSCSGEWVET 2144

Query: 1953 EDASDFRSKMQIFLNIANRQGFQLLQECTSWILE 1986
             D      +++++ +IA+  GF++L   T  +LE
Sbjct: 2145 IDRRATEKRLRVYKSIADFYGFKMLSMVTKGVLE 2178


>gi|443726073|gb|ELU13383.1| hypothetical protein CAPTEDRAFT_155313 [Capitella teleta]
          Length = 2273

 Score = 1391 bits (3601), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 708/1412 (50%), Positives = 951/1412 (67%), Gaps = 54/1412 (3%)

Query: 25   EELEAKLGYDLFSEGDKRLGWLLTFASSSLEDEDTRKVYSCIDLYFVSQDGSTFKSKYKF 84
            E+++ + G++   E  +++GWL+   SS + DED ++  S +D YF+ +DG+ FK    F
Sbjct: 37   EDIDLRYGFERHKESSEKIGWLINMHSSEILDED-KQFVSAVDYYFIQEDGNRFKVSLPF 95

Query: 85   RPYFYAATKEKMEMDVEAYLRRRYESQIADIEILEKEDLDLKNHLSGLHKSYLKISFDTV 144
            +PYFY AT++  E +V ++L +R+  +++ +E + KEDLDL NHL+ L + YLK+SF  V
Sbjct: 96   KPYFYVATRKGCEREVSSFLLKRFAGKLSSVETISKEDLDLDNHLTNLKQKYLKLSFLNV 155

Query: 145  QQLMDVKKDLLHVVERNQAKFDAAEAYESILTG--------KREQRPQDFLDCIVDLREY 196
             +LM VK++L   + +N+ +  A +AY ++LT            ++  D ++ I+ +REY
Sbjct: 156  DELMKVKRELFPAILKNKEQEKARDAYSTLLTSHLAGEEAVSVSKKISDQMENIIGIREY 215

Query: 197  DVPYHIRFAIDNDVRCGQWYDV-SISSTGPLLEKRVDLLQRAEVHVCAFDIETTKLPLKF 255
            DVPYH+R +ID  +  G WY V  ++   P +  R DL+ R E  V A+DIETTKLPLKF
Sbjct: 216  DVPYHVRVSIDLKIHVGLWYAVKGVAQGSPEITHREDLVDRPEPIVLAYDIETTKLPLKF 275

Query: 256  PDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNVNNEIELLR 315
            PDA  D +MMISYM+DGQGYLI NRE +  D+ED EYTP+PEFEG F V N  NE +LL+
Sbjct: 276  PDAQIDQVMMISYMIDGQGYLICNREIISHDVEDFEYTPRPEFEGPFIVFNEENEAQLLQ 335

Query: 316  LWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDKNQGECRAKFACH 375
             +F H+ EVKP I+VTYNGD+FDWPF+E RA+ HG  M +E+GFQ D +QGE  ++ A H
Sbjct: 336  KFFEHILEVKPNIFVTYNGDFFDWPFVEARASVHGLDMLQEIGFQKD-SQGEYGSRPAIH 394

Query: 376  LDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQMMASYSVSDAV 435
            +D F WVKRDSYLP GSQGLKAV KAKL YDP+E++PEDM R A E+PQ++A+YSVSDAV
Sbjct: 395  MDAFKWVKRDSYLPVGSQGLKAVAKAKLRYDPVELDPEDMCRMASEQPQVLATYSVSDAV 454

Query: 436  ATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVICPNKHQSDP 495
            ATYYLYM YVHPFIF+L TIIPM PDEVLRKGSGTLCE LLMVQA+ AN++ PNK ++  
Sbjct: 455  ATYYLYMKYVHPFIFALCTIIPMEPDEVLRKGSGTLCEALLMVQAFHANIVFPNKQEAVL 514

Query: 496  EKFYRN-HLLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQLLNNLDRDLQYAIKV 554
             K   + H+LESETY+GGHVE LESGVFR+++P  F++ P A++ L+  ++  + +AI  
Sbjct: 515  NKMTPDGHILESETYVGGHVEALESGVFRANIPCRFRMVPEAFQNLIQKVEATMIHAITE 574

Query: 555  EGKMDLESVSNYDEVKNAIMEKLLRLQEEPIREECPLIYHLDVAAMYPNIILTNRLQPPS 614
            E K+ L+SV+N+ E+ + + EKL  L++ P R E P+IYHLDVAAMYPNIILTNRLQPP+
Sbjct: 575  EEKIPLDSVTNFKEICDDVTEKLSVLRDCPNRLESPIIYHLDVAAMYPNIILTNRLQPPA 634

Query: 615  IVTDEVCTACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYYHLKKQIESE-FVDGTNGHLS 673
            IV +  C ACDFN+P   C R ++W WR E     R++Y+ ++ Q+E+E F     G   
Sbjct: 635  IVDEATCAACDFNKPDAPCQRNMKWAWRAEHLPANRNEYHRIQHQLENEKFPPQFPGGQP 694

Query: 674  KSFLDLPKMEQQSRLKDRLKKYCQKAYKRVLDKPVT--ELREAGICMRENSFYVDTVRSF 731
            ++F  LP++EQ +  K RL  YC+KAYK+     VT  E R A IC RENSFYVDTVR F
Sbjct: 695  RAFHQLPRVEQAAIEKKRLSDYCRKAYKKT---KVTRHEERTATICQRENSFYVDTVRDF 751

Query: 732  RDRRYEYKGLNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHKCILNSFYGYVMR 791
            RDRRY +KGL K WK KL EA+ SG++ +I+ A  MVVLYDSLQLAHKCILNSFYGYVMR
Sbjct: 752  RDRRYVFKGLVKTWKKKLGEAEESGDAGEIKRANGMVVLYDSLQLAHKCILNSFYGYVMR 811

Query: 792  KGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLPGSFPENFTFKTK 851
            KGARWYSMEMAG+V YTGA II  AR ++E+IG+PLELDTDGIWC+LP SFPEN+  KT 
Sbjct: 812  KGARWYSMEMAGIVCYTGASIIMQAREIVEQIGRPLELDTDGIWCILPASFPENYVVKTT 871

Query: 852  DLKK-KLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEFEVDGPYKAMI 910
            + KK K+TISYP  MLN  V  + TN QY  L D  +  YE  SE SI FEVDGPY AMI
Sbjct: 872  NPKKPKVTISYPGAMLNHMVKDSYTNHQYHELTDQSTLKYEKRSENSIFFEVDGPYLAMI 931

Query: 911  LPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFLHGSTIEE 970
            LPASKEEG  +KKRYAVFN DG+LAELKGFE+KRRGEL+LIK+FQ+ +FD FL G ++EE
Sbjct: 932  LPASKEEGKKLKKRYAVFNFDGSLAELKGFEVKRRGELQLIKIFQSSVFDAFLKGKSLEE 991

Query: 971  CYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLADYGEQKSCAVTTARRLS 1030
            CY  VA VA+ WLD+L ++ +++ D+EL + I+E+ +MSK L DYG QKS +++TARRL+
Sbjct: 992  CYDHVAKVADYWLDVLFSKAENMPDTELFELIAENRSMSKKLEDYGAQKSTSISTARRLA 1051

Query: 1031 DFLGDTMVKDKGLRCQYIVACEPQGTPVSERAVPVAIFETDAEIMKFYLRKWCKTSS--D 1088
            +FLGD MVKD GL C+YI++ +P+G PV+ERA+P+AIF+ +  + K YL+KW K  S  +
Sbjct: 1052 EFLGDQMVKDAGLSCRYIISKKPEGAPVTERAIPLAIFQAEPSVCKHYLKKWLKAPSMLN 1111

Query: 1089 VGIRSIVDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLYKKVREKEDKFRQR 1148
              IR I+DW+YY +RL SAIQKIITIPAA+Q VSNPVPR+ HPDWL+KK+ EK D ++Q+
Sbjct: 1112 FDIRQILDWNYYIERLGSAIQKIITIPAALQAVSNPVPRIAHPDWLHKKMLEKSDIYKQK 1171

Query: 1149 KLVDIFSSLKKDDFLNKTCNAETNLMDENVEDLEDFPKKRRNSVNGPRPIVRCFEVNNEQ 1208
            ++ ++FS + K++   +    E     ++  D+ED          G +  V    V   +
Sbjct: 1172 RISEMFSVVSKEE-RQQQLQDEAAAERDSCTDIEDI------GGGGSKGAVSLPSVTAAK 1224

Query: 1209 KTVKTTDQVDSLRQQLEPSEVSDQQPSSQNAIDTENIDRIVDYKGWLELKKRKW----KD 1264
            +      Q       L   +V    PS     D+  I        WL+  K+KW    + 
Sbjct: 1225 RKRADDSQKAGEDLSLSWKDVLGNPPSMGTTRDSIQI--------WLKFHKKKWSFQGRQ 1276

Query: 1265 NLDRRKKQKLGSLRASHQANGVSESLGDMINHKEAQRRTGVGSYFRRQETAMTRCHWQII 1324
              DR K+++ G   +          +G            G+G + RR   +M    WQII
Sbjct: 1277 RKDRSKRRRTGGDDSQGGGGAGVVRMGS----------GGIGGFLRRTARSMIDLPWQII 1326

Query: 1325 QLVPSSQSGVFLAWVVVEGIMVRIPITVPRLFYLNSKDPIVEKFPG---RRVNKTLPHGR 1381
            QLV +   G++  W ++   +  I + VPR+FY+N K    E+  G   R+ NK LP   
Sbjct: 1327 QLVETQTPGIYRLWALIGHDLHAIKLQVPRIFYVNQKTA-KEEGDGTMWRKSNKLLPRSH 1385

Query: 1382 RSFNLIEVMIDEDQFRKESKKLAALLADPEVE 1413
               NL E  + ED + +    + A L+ P+VE
Sbjct: 1386 PVSNLYEYSVPEDVYIQHIHDITADLSSPDVE 1417



 Score =  307 bits (787), Expect = 3e-80,   Method: Compositional matrix adjust.
 Identities = 184/600 (30%), Positives = 297/600 (49%), Gaps = 61/600 (10%)

Query: 1442 LARYAHILWISDDGVPDLGGTSEEDECF---ADEVHQPVLTYPGAYRKVSVELKIHHLSV 1498
            L ++ H++W S    PDLGG   +D       DE     L  PG Y  + +EL I  L+V
Sbjct: 1672 LDKHNHLMWASQTQRPDLGGKEYDDNRMPLCTDEERILELNEPGCYSTICMELDIASLAV 1731

Query: 1499 NALLKSNQVNEMEGGGLFGFD-------QDMNSGPYNNELCG-FDETTSSAPAFRVVKQL 1550
            N L++S+ VNE EG  + GFD       +DM +G   + +   +D T   + AFRV+K +
Sbjct: 1732 NTLIQSSHVNEGEGASVVGFDVLPQSSLEDMVTGQGASTMMAHYDHTALCSNAFRVMKNM 1791

Query: 1551 IQRCLTDAVTSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEFRK 1610
            +   + D     N+FAD  + H YRWL +P++ L+DP L   L  +M+KVF  L+AEF++
Sbjct: 1792 VHCWVRDVSMHQNIFADHQIMHFYRWLRTPNALLYDPALRMTLLSLMKKVFMQLMAEFKR 1851

Query: 1611 LGATIIFANFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLFMD 1670
            LG+ II ANF+++I+ T K  +S A  Y   +  +++ + LF+ +++     WH LL+M+
Sbjct: 1852 LGSVIIHANFNRLIVCTKKRRISDAMGYMQYICNSIRAKPLFQLLDMNYAQCWHVLLWMN 1911

Query: 1671 QYNYGGIPARADESLDDDSQVD---------------------------IVSSWNIAEYL 1703
            Q N+GG+  +   +L  D   +                           + S+WN+  +L
Sbjct: 1912 QANFGGVKGKISSNLTQDENGNEEKENESGEEEEEELMEPGGEEEEAPVVESNWNLGRFL 1971

Query: 1704 PK--EIQDHFVLVVSEFMYIPWKHAQKLAASRASLQEGSSCTP-------SITVAAAENF 1754
            P+    Q +F ++++ ++   ++       + + +Q     TP       + T       
Sbjct: 1972 PEAGACQTNFKMIIAGYIMSVYE-----VLTDSDVQSTPGNTPVQPYVSQTQTSTVPVGT 2026

Query: 1755 ESHIVQYVKGEISSYFTGKLLSIVRDAIHHMKKMNNDQHNSPGVMQTAANIH-KVDAP-L 1812
               +V + K  IS+    ++  I +     +   + + H+           H K+  P L
Sbjct: 2027 MPAVVDHCKDLISNQLCQQMYLITQKTQKKLVGSHGNSHSLASEFPVLPGSHLKLKNPAL 2086

Query: 1813 EFIKHVCAAFALDQNVQHDVLVMRKNLLKYVRVREFAPEAEFRDPCPSFILPNVICSYCN 1872
            EF+K VC   ALD  V  +V  M+++LLK + V EF+PEA F+DPC S+++P +IC  CN
Sbjct: 2087 EFVKSVCEVLALDSVVSEEVNKMKRDLLKLISVGEFSPEATFKDPCLSYVIPEMICRGCN 2146

Query: 1873 DCRDLDLCRDMAL-----LAQDWHCAMPQCGQPYDREVMENALLQIVRQRERLYHLQDLV 1927
              RDLDLCRD +L       Q W C    C   YD   +E  L+  V++    Y LQDL 
Sbjct: 2147 AVRDLDLCRDASLNENYESGQSWRCL--HCKSLYDLREIEGVLVDAVQRDSMSYVLQDLQ 2204

Query: 1928 CIRCNQVKAAHLAEQCACAGSFRCKEDASDFRSKMQIFLNIANRQGFQLLQECTSWILEV 1987
            C +C  +K  ++   C CAGSF        +  K+  F +IA     ++LQE   WI+++
Sbjct: 2205 CAKCRGIKEDNVGSHCKCAGSFNATLAVETYAKKLNTFNSIAQHYDMRMLQETIDWIMKL 2264


>gi|398390385|ref|XP_003848653.1| hypothetical protein MYCGRDRAFT_76789 [Zymoseptoria tritici IPO323]
 gi|339468528|gb|EGP83629.1| hypothetical protein MYCGRDRAFT_76789 [Zymoseptoria tritici IPO323]
          Length = 2226

 Score = 1391 bits (3601), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 704/1406 (50%), Positives = 945/1406 (67%), Gaps = 68/1406 (4%)

Query: 32   GYDLFSEGDKRLGWLLTFASSSLEDEDTRKVYSCIDLYFVSQDGSTFKSKYKFRPYFYAA 91
            G++ F  G KR+GWL    S+++ED       + +D YF++ DG +FK+  +++PYF  A
Sbjct: 56   GFERFEAGKKRVGWLCNMHSTAIEDSKVPGGRAAVDFYFINDDGESFKASVEYQPYFLIA 115

Query: 92   TKEKMEMDVEAYLRRRYESQIADIEILEKEDLDLKNHLSGLHKSYLKISFDTVQQLMDVK 151
             K+  E +VE +++R YE  +  ++ + KEDL + NHL G  +++LK+SF     L+ V+
Sbjct: 116  VKKGREPEVEEWVKRGYEGLVRGVDKVVKEDLKMPNHLLGYRRTFLKLSFANQNDLLAVR 175

Query: 152  KDLLHVVERNQAKFDAAEAYESILTG------------KREQRPQ--DFLDCIVDLREYD 197
            ++L+ + E+N+++  A + Y  + +             +  QR    D  D IVD+REYD
Sbjct: 176  RELMPIAEKNKSQTSAMDTYAEVASANAGFDLFEDEADRDRQRTSIADASDFIVDIREYD 235

Query: 198  VPYHIRFAIDNDVRCGQWYDVSISSTGPLLEKRVDLLQRAEVHVCAFDIETTKLPLKFPD 257
            VPYH+R AID D+R G+WY V        L    + LQRA+  V A+DIETTKLPLKFPD
Sbjct: 236  VPYHVRVAIDLDIRIGKWYSVESKHGRMKLTCIEERLQRADPVVMAYDIETTKLPLKFPD 295

Query: 258  ADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNVNNEIELLRLW 317
            A +D IMMISYM+DGQG+LI NRE V EDI+D +YTPKPE++G F + N  NE  +L  +
Sbjct: 296  AAFDQIMMISYMIDGQGFLITNREIVSEDIQDFDYTPKPEYDGPFLIFNEPNEEAVLERF 355

Query: 318  FAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDKNQGECRAKFAC-HL 376
            FA ++E +P I VTYNGD+FDWPF+E RA+ HG  M +E+GF+  KN  +      C H+
Sbjct: 356  FACIKEARPTIIVTYNGDFFDWPFVEARASVHGMDMYQEIGFR--KNSEDIYQSTHCAHM 413

Query: 377  DCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQMMASYSVSDAVA 436
            D FAWV RDSYLPQGS+GLKAVT AKLGYDP E++PE M  +A ++PQ +A YSVSDAVA
Sbjct: 414  DAFAWVSRDSYLPQGSRGLKAVTVAKLGYDPDELDPELMTPYATDRPQTLAEYSVSDAVA 473

Query: 437  TYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVICPNKHQSDPE 496
            TYYLYM YVHPFIFSL TIIP+ PD+VLRKG+GTLCEMLLMVQAY+  ++ PNKH    E
Sbjct: 474  TYYLYMKYVHPFIFSLCTIIPLGPDDVLRKGTGTLCEMLLMVQAYQKEIVLPNKHIQPRE 533

Query: 497  KFYRNHLLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQLLNNLDRDLQYAIKVEG 556
             F+  HLL+SETY+GGHVE +E GVFR+D+PT+F +DP+A + LL +LD  L++ I VE 
Sbjct: 534  AFWEGHLLDSETYVGGHVESIECGVFRADIPTNFAVDPAAIDDLLRDLDAALKFCITVEE 593

Query: 557  KMDLESVSNYDEVKNAIMEKLLRLQEEPIREECPLIYHLDVAAMYPNIILTNRLQPPSIV 616
            K  L+ V NYDEVK  I E+L++L+E P R E PLIYHLDVA+MYPNI+ TNRLQP S++
Sbjct: 594  KKSLDDVENYDEVKAQITERLMQLKETPNRLEKPLIYHLDVASMYPNIMTTNRLQPDSMI 653

Query: 617  TDEVCTACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYYHLKKQIESE-FVDGTNGHLSKS 675
             +  C ACDFNRPGKTC R++ W WRGE    KR +Y  ++  +E+E F       L+++
Sbjct: 654  DESTCAACDFNRPGKTCDRRMPWSWRGEFLPAKRDEYNMIRHALENEKFPAKFPNGLARA 713

Query: 676  FLDLPKMEQQSRLKDRLKKYCQKAYKRVLDKPVTELREAGICMRENSFYVDTVRSFRDRR 735
            F DL   EQ   ++ RL  Y +K Y ++ +    E REA IC REN FYVDTV+ FRDRR
Sbjct: 714  FHDLSLDEQTGLVRKRLTDYSKKIYHKIHETKTME-REAIICQRENPFYVDTVKDFRDRR 772

Query: 736  YEYKGLNKVWKGKLSE-AKASGNSIKIQEAQDMVVLYDSLQLAHKCILNSFYGYVMRKGA 794
            Y+YKG  KVWKGK ++  KA  +S +IQEA+ MVV++DSLQLAHK ILNSFYGYVMRKG+
Sbjct: 773  YDYKGQQKVWKGKTADLEKAGASSDEIQEAKKMVVVFDSLQLAHKVILNSFYGYVMRKGS 832

Query: 795  RWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLPGSFPENFTFKTKDLK 854
            RWYS++MAGV   TGA+IIQ AR L+E+IG+PLELDTDGIWC+LP +FPENF FK K+  
Sbjct: 833  RWYSLDMAGVTCLTGARIIQLARQLVERIGRPLELDTDGIWCILPATFPENFGFKLKN-G 891

Query: 855  KKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEFEVDGPYKAMILPAS 914
            KK+TISYPCVMLN  V    TN QYQ LVDPV+  YETHS+ +I FEVDGPY+AMILP S
Sbjct: 892  KKMTISYPCVMLNHLVHGKFTNHQYQELVDPVTHKYETHSDNTIFFEVDGPYRAMILPTS 951

Query: 915  KEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFLHGSTIEECYSA 974
            KEE   +KKRYAVFNDDGTLAELKGFE+KRRGELKLIK+FQ ++F  FL G+T+ E Y+A
Sbjct: 952  KEEDKNLKKRYAVFNDDGTLAELKGFEVKRRGELKLIKIFQQQIFKFFLEGTTLAETYAA 1011

Query: 975  VAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLADYGEQKSCAVTTARRLSDFLG 1034
            VA VAN+WLD+L + G  +AD ELID I E+ +M+K+L +YG QKS A+TTA+RL++FLG
Sbjct: 1012 VAKVANKWLDVLHSHGSTLADEELIDLICENKSMTKTLEEYGAQKSTAITTAKRLAEFLG 1071

Query: 1035 DTMVKDKGLRCQYIVACEPQGTPVSERAVPVAIFETDAEIMKFYLRKWCKTS-SDVGIRS 1093
            + MVKDKGL C+YI++  P+  PV+ERA+PVAIF  D  + ++YLRKW K    D+  R 
Sbjct: 1072 EQMVKDKGLNCKYIISSRPKNAPVTERAIPVAIFSADETVKRYYLRKWMKEDPGDMDPRG 1131

Query: 1094 IVDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLYKKVREKEDKFRQRKLVDI 1153
            I+DW+YY +RL S IQK+ITIPAA+QKV NPVPRV HPDWL +++R K+D F+Q+K+ D+
Sbjct: 1132 IIDWNYYLERLGSVIQKLITIPAALQKVRNPVPRVAHPDWLNRRIRIKDDIFKQKKMTDM 1191

Query: 1154 FSSLKKDDFLNKTCNAETNLMDENVEDLEDFPKKRRNSVNGPRPIVRCFEVNNEQKTVKT 1213
            F    K        N+  N  + ++ED    P  +       +P V   ++   QK    
Sbjct: 1192 FG---KQPLTELDANSVANRTNGDMEDFGSTPMSKL------KPSVAA-KIAGSQKRKAI 1241

Query: 1214 TDQVDSLRQQLEPSEVSDQQPSSQNAIDTENIDRIVDYKGWLELKKRKWKDNLDRRKKQK 1273
               V ++      +   D  P+   +I TE      DY+GWL+ +K+KWK     RK+++
Sbjct: 1242 EADVPAVT-----ANPYDSLPAVMPSI-TE------DYQGWLKYQKKKWKIQKAARKRRR 1289

Query: 1274 LGSLRASHQANGVSESLGDMINHKEAQRRTGVGSYFRRQETAMTRCHWQIIQLVPSSQSG 1333
                               +   K A     +G++FR Q   +    WQI+QL  +   G
Sbjct: 1290 ------------------QLFGEKRADATDAIGTFFRNQAEVLYTTDWQILQLRDTDVPG 1331

Query: 1334 VFLAWVVVEGIMVRIPITVPRLFYLNSK-----DPIVEKFPGRRV-NKTLPHGRRSFNLI 1387
               A+V+++  + ++ + VPR  +LN K     D  V+     ++ N TLP+G  S +L 
Sbjct: 1332 EVRAYVLIDKKVHQLKVIVPRQVFLNLKEDDLPDVTVDGVKAEKITNHTLPNGHPSTHLF 1391

Query: 1388 EVMIDEDQFRKESKKLAALLADPEVE 1413
            ++ + E  + KE+++L+ L     VE
Sbjct: 1392 KLTMSEQVYVKEAEQLSTLFNHTSVE 1417



 Score =  229 bits (583), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 165/627 (26%), Positives = 290/627 (46%), Gaps = 65/627 (10%)

Query: 1408 ADPEVEVLGWQQNAAKIGMQRCAASSQWFNERISLARYAHI------------------- 1448
             D ++  LGWQ   AK  +        W +  +  +RY ++                   
Sbjct: 1613 TDKQLPPLGWQSFVAKRMVGHYLDLGLWISHLLEFSRYGNVPLCNLEMDDPRFLIDIAYA 1672

Query: 1449 ---------LWISDDGVPDLGGTSEEDECFADEV-HQPVLTYPGAYRKVSVELKIHHLSV 1498
                     LW S+D  PD  G  ++D   + EV   P +  PG Y  V ++L I +L++
Sbjct: 1673 RRLQQERVVLWWSEDARPDHAGHEKDDILGSMEVVEMPAVNNPGTYSSVCIDLSIKNLAI 1732

Query: 1499 NALLKSNQVNEMEGGGLFGFDQDMNSGPYNNELCGFDETTSSAPAFRV-----VKQLIQR 1553
            N +L S  +N+ EG    G      +G   + L    +T  S  AF       ++++++ 
Sbjct: 1733 NTILSSAVLNQAEGSDPMGIS---GAGAQEDALDETAQTVQSENAFAAAGIGALREMVRS 1789

Query: 1554 CLTDAVT--SGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEFRKL 1611
               +A T  S +  AD ++QHL RW+ SP S L+D  LH  +  + +K F  L++EFR++
Sbjct: 1790 WWQEACTGSSSSTMADVLVQHLVRWVESPSSHLYDRNLHYYVQMMSRKAFQQLMSEFRRV 1849

Query: 1612 GATIIFANFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLFMDQ 1671
            G+ ++FAN  ++++ T K ++  A AY   +LK + T+  F +++L    +W  L + D+
Sbjct: 1850 GSHVVFANAGRLLLQTSKAEVGNAFAYSQYILKTISTKPAFHFLDLAITEYWDYLAWYDE 1909

Query: 1672 YNYGGIPARADESLDDDSQ-VDIVSSWNIAEYLPKEIQDHFVLVVSEFMYIPWKHAQKLA 1730
            +NYGG      E ++ ++Q +D +  W +A +LP  +Q +F   V E  YI   H +K  
Sbjct: 1910 FNYGG--KGCTEVVEAENQSLDTIMHWQMASFLPPILQPNFNQWVVE--YINLMHERK-- 1963

Query: 1731 ASRASLQEGSSCTPSITVAAAENFESHIVQYVKGEISSYFTGKLL--SIVR-------DA 1781
                 L  G+     + + A+        Q   G I S    K L   IV+       +A
Sbjct: 1964 -HPTGLINGTQRATQLPIHASIFNSEKDDQTTPGNILSKSISKPLQKQIVQLIKRQRAEA 2022

Query: 1782 IHHMKKMNNDQHNSPGVMQTAANIHKVDAPLEFIKHVCAAFALDQNVQHDVLVMRKNLLK 1841
            +H     +      PG     A+++  +  +E +K +    +LD+ +  +  ++RK+LL 
Sbjct: 2023 LHEDLLPDWTFPALPG-----AHLNPQNPVIELVKSIMQVLSLDKTITLEARLLRKDLLH 2077

Query: 1842 YVRVREFAPEAEFRDPCPSFILPNVICSYCNDCRDLDLCRDMALLAQDWHCAMPQCGQ-- 1899
               +REF+ +  F +P  S  +  + CS C   RD+DLCRD  ++A D   A P+CG   
Sbjct: 2078 LFEIREFSSDGAFANPSTSLSVKQLSCSECCVPRDIDLCRDTDIVAADGSLA-PKCGNCN 2136

Query: 1900 -PYDREVMENALLQIVRQRERLYHLQDLVCIRCNQVKAAHLAEQCACAGSFRCKEDASDF 1958
              +DR  +E  LL  V++    +  QDL C +C +V+     + C CAG +       D 
Sbjct: 2137 ADFDRLGIEEKLLAEVQRLVVQWMTQDLKCKKCKRVRTNEFMDHCGCAGEWIGTVKREDV 2196

Query: 1959 RSKMQIFLNIANRQGFQLLQECTSWIL 1985
               ++++  +A     ++L+     ++
Sbjct: 2197 VKVLKVYEQVARFYELRMLESVVGSVV 2223


>gi|169617538|ref|XP_001802183.1| hypothetical protein SNOG_11951 [Phaeosphaeria nodorum SN15]
 gi|111059243|gb|EAT80363.1| hypothetical protein SNOG_11951 [Phaeosphaeria nodorum SN15]
          Length = 2236

 Score = 1390 bits (3599), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 703/1436 (48%), Positives = 942/1436 (65%), Gaps = 78/1436 (5%)

Query: 9    QDGRRTKKQKLIRSAE--EELEAKLGYDLFSEGDKRLGWLLTFASSSLEDEDTRKVYSCI 66
            + G  T +Q  + +      ++  +G+  F  G K++GWL+   S+++EDED     + +
Sbjct: 35   RSGEGTSQQDKLEATRLANRIDESMGFSRFESGKKKVGWLVNMHSTTIEDEDVPGGKAGV 94

Query: 67   DLYFVSQDGSTFKSKYKFRPYFYAATKEKMEMDVEAYLRRRYESQIADIEILEKEDLDLK 126
            D YF+ +DG TFK+  ++ PYF  A K+  E DVE Y RR +E  I  I+ +EKEDL + 
Sbjct: 95   DYYFIGEDGDTFKATLEYDPYFLLAVKKGREQDVEEYCRRAFEGLIKSIKKVEKEDLSMP 154

Query: 127  NHLSGLHKSYLKISFDTVQQLMDVKKDLLHVVERNQAKFDAAEAYESILTG--------- 177
            NHL+G  +++L+++F  V  L+ V+K +  +VE+N+   DA + Y  + TG         
Sbjct: 155  NHLTGYRRTFLQLTFANVNDLLAVRKAVAPIVEKNKKNVDAMDTYAEVATGNAGMDFFDN 214

Query: 178  ------KREQRPQDFLDCIVDLREYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLLEKRV 231
                  KR     D  D IVD+REYDVPYH+R AID DVR G WY V        ++   
Sbjct: 215  DDYEYEKRFMTTIDASDFIVDIREYDVPYHVRVAIDMDVRIGNWYTVDAKHGVISIKCIE 274

Query: 232  DLLQRAEVHVCAFDIETTKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLE 291
            D L  A+  V A+DIETTKLPLKFPDA  D IMM+SYM+DGQG+LI NRE V EDI D E
Sbjct: 275  DRLTPADPVVMAYDIETTKLPLKFPDAVIDQIMMVSYMIDGQGFLITNREIVSEDISDFE 334

Query: 292  YTPKPEFEGYFKVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGF 351
            YTPKPE+ G F + N  +E  L+  +F H++E KP + VTYNGD+FDWPF+E RA+  G 
Sbjct: 335  YTPKPEYHGPFMIFNEPDEKALIERFFEHIKEAKPTVMVTYNGDFFDWPFVEARASVLGI 394

Query: 352  KMSEELGFQCDKNQGEC-RAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEV 410
             M +E+GF+  KN  +  ++ +  H+D FAWV RDSYLPQGS+GLKAVT AKLGYDP E+
Sbjct: 395  DMYQEIGFR--KNSEDIYQSDYCAHMDAFAWVSRDSYLPQGSRGLKAVTMAKLGYDPDEL 452

Query: 411  NPEDMVRFAKEKPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGT 470
            +PE M  +A E+PQ +A YSVSDAVATYYLYM YVHPFIF+L  I+P+ PD+ LRKG+GT
Sbjct: 453  DPELMTPYASERPQTLAEYSVSDAVATYYLYMKYVHPFIFALCKILPLGPDDALRKGTGT 512

Query: 471  LCEMLLMVQAYKANVICPNKHQSDPEKFYRNHLLESETYIGGHVECLESGVFRSDLPTSF 530
            LCEMLLMVQAY+  +  PNKHQ+  E F+  HLLESETY+GGHVE LE+GVFRSD+  +F
Sbjct: 513  LCEMLLMVQAYQKGIALPNKHQAPKEAFWEGHLLESETYVGGHVEALEAGVFRSDIAYNF 572

Query: 531  KLDPSAYEQLLNNLDRDLQYAIKVEGKMDLESVSNYDEVKNAIMEKLLRLQEEPIREECP 590
             +DP+A ++L+N+LD  L+++I+VE K  +E V+NYDE+K  I+  L++L+  P R E P
Sbjct: 573  AVDPTAIDELINDLDAALKFSIEVEEKKKMEDVTNYDEIKAEIVNNLMQLKNTPNRNERP 632

Query: 591  LIYHLDVAAMYPNIILTNRLQPPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEIFMGKR 650
            LIYHLDVA+MYPNI+ TNRLQP S++ +  C ACDFNRPGKTC R++ W WRGE    KR
Sbjct: 633  LIYHLDVASMYPNIMTTNRLQPDSMIKEADCAACDFNRPGKTCDRRMPWAWRGEYLPAKR 692

Query: 651  SDYYHLKKQIESEFVDG--TNGHLSKSFLDLPKMEQQSRLKDRLKKYCQKAYKRVLDKPV 708
             +Y  ++  +E+E   G   N  + +SF +L + EQ + ++ RL  Y +K Y +V D   
Sbjct: 693  DEYNMVRNALENERFPGKWPNSPM-RSFQELSQDEQATLVRKRLTDYSKKIYHKVHDATT 751

Query: 709  TELREAGICMRENSFYVDTVRSFRDRRYEYKGLNKVWKGKLSEAKASGNSI-KIQEAQDM 767
             E REA IC REN FYVDTV  FRDRRY++KG  KVWKGK    KA+G    +++ A+ M
Sbjct: 752  IE-REAIICQRENPFYVDTVSGFRDRRYDFKGKQKVWKGKTDALKAAGAPAHEVEHAKKM 810

Query: 768  VVLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPL 827
            +VL+DS+QLAHK ILNSFYGYVMRKG+RWYS+EMAGV   TGA+IIQ AR L+E+IG+PL
Sbjct: 811  IVLFDSMQLAHKVILNSFYGYVMRKGSRWYSLEMAGVTCLTGARIIQLARSLVERIGRPL 870

Query: 828  ELDTDGIWCVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVS 887
            ELDTDGIWC+LP +FPENF+FK  +  KK+TISYPC MLN  V    TN QY+TLVDPV+
Sbjct: 871  ELDTDGIWCILPATFPENFSFKMSN-GKKMTISYPCTMLNHLVHAQYTNHQYETLVDPVN 929

Query: 888  KTYETHSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGE 947
              YE HS+ SI FEVDGPYKAMILP SKEE   +KKRYAVFN DG+LAELKGFE+KRRGE
Sbjct: 930  FRYEKHSDNSIFFEVDGPYKAMILPTSKEEDKNLKKRYAVFNHDGSLAELKGFEVKRRGE 989

Query: 948  LKLIKVFQAELFDKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESST 1007
            LKLIK FQA++F  FL G+T+EE Y AVA VANRWLD+LD +G  +AD ELID I E+ +
Sbjct: 990  LKLIKNFQAQIFKFFLEGTTLEETYGAVANVANRWLDILDTRGASLADEELIDLIVENKS 1049

Query: 1008 MSKSLADYGEQKSCAVTTARRLSDFLGDTMVKDKGLRCQYIVACEPQGTPVSERAVPVAI 1067
            M+K+L +YG QKS A+TTA+RL++FLG+ MVKDKGL C+YI++  P+  PV+ERA+P++I
Sbjct: 1050 MTKTLEEYGAQKSTAITTAKRLAEFLGEQMVKDKGLNCKYIISKTPRNAPVTERAIPMSI 1109

Query: 1068 FETDAEIMKFYLRKWCKT-SSDVGIRSIVDWSYYKQRLSSAIQKIITIPAAMQKVSNPVP 1126
            F  +  + +++LRKW K    D+  R+++DW YY++RL+S IQK+ITIPAA QKV NPVP
Sbjct: 1110 FSAEESVKRYFLRKWMKEDPGDMDPRTVLDWDYYRERLASVIQKLITIPAAYQKVRNPVP 1169

Query: 1127 RVVHPDWLYKKVREKEDKFRQRKLVDIFSSLKKDDFLNKTCNAETNLMDENVEDLEDFPK 1186
            RV HPDWL +++R+KEDK +Q+K+ D+FS   K        N   N +     DLEDF  
Sbjct: 1170 RVPHPDWLDRRIRQKEDKLQQKKMTDMFS---KKPLTTGDANVANNKLS---GDLEDFGA 1223

Query: 1187 KRRNSVNGPRPIVRCFEVNNEQKTVKTTDQVDSLRQQLEPSEVSDQQPSSQNAIDTENID 1246
             +               V+  Q  +K       + ++ EP      Q     A+      
Sbjct: 1224 AK---------------VSQAQSQMKKGIVTKMVAKRKEPEPAVPVQTDPYAALPKVMPS 1268

Query: 1247 RIVDYKGWLELKKRKWKDNLDRRKKQKLGSLRASHQANGVSESLGDMINHKEAQRRTGVG 1306
               DY GWL  +K+KWK     RK+++                   +   K       +G
Sbjct: 1269 ITNDYSGWLMYQKQKWKIQAQARKRRR------------------QLFGEKPVDSNDAIG 1310

Query: 1307 SYFRRQETAMTRCHWQIIQLVPSSQSGVFLAWVVVEGIMVRIPITVPRLFYLNSKDPIVE 1366
            ++FR Q  ++    WQ++QL P+   G   A+V+++  +  + + VPR  YLN +    E
Sbjct: 1311 TFFRNQAQSLFISTWQLVQLRPTETPGEVKAFVLIDKKIHILKVIVPRQLYLNLRS---E 1367

Query: 1367 KFPG---------RRVNKTLPHGRRSFNLIEVMIDEDQFRKESKKLAALLADPEVE 1413
              P          + VN TLP+G  S +L ++ + E  +  E+  ++ L   P VE
Sbjct: 1368 DLPDVSISGCSVEKVVNHTLPNGHPSIHLFKLEMSEQTYVHEAANISILFNHPSVE 1423



 Score =  242 bits (618), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 168/635 (26%), Positives = 300/635 (47%), Gaps = 75/635 (11%)

Query: 1408 ADPEVEVLGWQQNAAKIGMQRCAASSQWFNERISLARYAHI------------------- 1448
             D ++  LGWQ   AK  +        W    + L+RY  I                   
Sbjct: 1619 TDKQLPPLGWQAFIAKRLVSHYLDLGSWVAHLLELSRYGDIPLCNLESNDPRFLIDVAYA 1678

Query: 1449 ---------LWISDDGVPDLGGTSEEDECFADE-VHQPVLTYPGAYRKVSVELKIHHLSV 1498
                     LW S    PD  G  ++D     E V  P +   G Y  V +++ + +L++
Sbjct: 1679 RRLQKERVILWWSGQAKPDHAGYEKDDILGPLETVEMPSINNAGTYSSVCIDISLRNLAI 1738

Query: 1499 NALLKSNQVNEMEGGGLFGFDQDMNSGPYNNELCG--FDETTSSAPAFRVVKQLIQRCLT 1556
            N +L S+ VN++EG     F+    S    N+     + +   ++    V++++++    
Sbjct: 1739 NTILSSSLVNDLEGADSVSFNPSAPSYDSANDGTNVIYSDNAFASAGIMVLREMVKAWWI 1798

Query: 1557 DAVTSGNVF--ADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEFRKLGAT 1614
            +AV +G+ F  AD ++QHL RW+ SP S L+D  LH  +  + +K    L+A+F+++G+ 
Sbjct: 1799 EAVQAGSGFSMADVMVQHLVRWVSSPGSFLYDRSLHYYVEMMSKKTLQQLMADFKRVGSH 1858

Query: 1615 IIFANFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLFMDQYNY 1674
            I+FA+ +++++ T K ++  A AY   ++K ++++ LF+++ELE   +W  L++ D++NY
Sbjct: 1859 IVFASPNRLLLQTTKAEVGNAYAYSQYIIKTIKSKPLFQFMELEIKEYWDYLVWYDEFNY 1918

Query: 1675 GGIPARADESLDDDSQ-VDIVSSWNIAEYLPKEIQDHFVLVVSEFMYIPWKHAQKLAASR 1733
            GG   +  E +++++Q ++ +  W +A++LP  +Q  F   V EF  I   HA+K    R
Sbjct: 1919 GGKGCK--EVVEEENQTIENIMCWQLAQFLPATLQPTFNDWVIEF--IELMHARK----R 1970

Query: 1734 ASLQEGSSCTPSIT------VAAAENFESHIVQYVKGEISSYFTGKLLSIVRDAI--HHM 1785
             ++ +GS  TP  T      +    N ++ I       +   FT  L   +   +   H 
Sbjct: 1971 PTVTDGS--TPRTTQIPLRPLTVDPNEQTQI-------LPKTFTKPLFKQISTLLRRQHT 2021

Query: 1786 KKMNNDQHNSPGVMQTAANIHKVDAP-LEFIKHVCAAFALDQNVQHDVLVMRKNLLKYVR 1844
            + ++ +        Q   +  K+  P L+ +K +    +LD+ +  +  ++RK LL    
Sbjct: 2022 EMLHPELAADYEFPQLPGSHLKLSNPVLQLVKSIMQVLSLDRAISLEARMLRKELLNLFE 2081

Query: 1845 VREFAPEAEFRDPCPSFILPNVICSYCNDCRDLDLCRDMALL-------------AQDWH 1891
            +REF+ EA F +P     +  VIC  C   RDLDLCRD ALL                W 
Sbjct: 2082 IREFSSEATFVNPSAVLSVRGVICDECTCSRDLDLCRDAALLPPVLPNNSDTAPAPPKWK 2141

Query: 1892 CAMPQCGQPYDREVMENALLQIVRQRERLYHLQDLVCIRCNQVKAAHLAEQCACAGSFRC 1951
            C    C   YD+  +E  L+  V++    +  QDL C +C ++++    E CACAG +  
Sbjct: 2142 CD--NCDSTYDKLRIEEKLVSEVQKVVLEWCTQDLKCNKCKRLRSNEFMEHCACAGEWVG 2199

Query: 1952 KEDASDFRSKMQIFLNIANRQGFQLLQECTSWILE 1986
             +   D + K+  + N+A   G ++L+      LE
Sbjct: 2200 TKSRGDVKKKLNTYNNVAGFYGLKMLESVVQECLE 2234


>gi|326474874|gb|EGD98883.1| DNA polymerase epsilon catalytic subunit A [Trichophyton tonsurans
            CBS 112818]
          Length = 2224

 Score = 1389 bits (3594), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 711/1417 (50%), Positives = 960/1417 (67%), Gaps = 84/1417 (5%)

Query: 27   LEAKLGYDLFSEGDKRLGWLLTFASSSLEDEDTRKVYSCIDLYFVSQDGSTFKSKYKFRP 86
            ++  +G+  +  G KR+GWL    S+++ED       + ++ YF+ ++G +FK+  ++ P
Sbjct: 53   IDETMGFARYEAGKKRIGWLCNMHSTTIEDSKVPGGRAAVEFYFLEENGGSFKAAVEYDP 112

Query: 87   YFYAATKEKMEMDVEAYLRRRYESQIADIEILEKEDLDLKNHLSGLHKSYLKISFDTVQQ 146
            YF  ATK   E +VE + +R +E  +  ++++EKEDL + NHL G  + +L++SF  V  
Sbjct: 113  YFLIATKRGHEAEVEEWCKRTFEELVKGVKLVEKEDLKMPNHLLGYKRKFLQLSFANVSD 172

Query: 147  LMDVKKDLLHVVERNQAKFDAAEAYESILTG-------------KREQRPQDFLDCIVDL 193
            L+ V+K +  +  +N+ K +A + Y  + +              + +   QD  D IVD+
Sbjct: 173  LLAVRKTIFPIAIKNRKKVNAMDTYAELASANAGFDLFDDDSNNRGQNSLQDAADYIVDI 232

Query: 194  REYDVPYHIRFAIDNDVRCGQWYDV-SISS--TGPLLEKRVDLLQRAEVHVCAFDIETTK 250
            REYDVPYH+R +ID D+R G+WY V SI    T   LE+R   LQRA+  V A+DIETTK
Sbjct: 233  REYDVPYHVRVSIDKDIRIGKWYTVQSIHGLITLTCLEER---LQRADPVVLAYDIETTK 289

Query: 251  LPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNVNNE 310
            LPLKFPDA  D IMMISYM+DG+GYLI NRE V EDI D EYTPKPE+ G F + N  +E
Sbjct: 290  LPLKFPDAAIDQIMMISYMIDGRGYLITNREIVSEDINDFEYTPKPEYPGPFTIFNEPDE 349

Query: 311  IELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDKNQGEC-R 369
              +L  +F+H++E KP + VTYNGD+FDWPF+E RA+  G  M  E+GF+  KN  +  +
Sbjct: 350  KAVLERFFSHVKEAKPSVMVTYNGDFFDWPFVEARASVQGIDMYAEIGFR--KNSEDIYQ 407

Query: 370  AKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQMMASY 429
            + +  H+D F+WV RDSYLPQGS+GLKAVT AKLGYDP E++PE M R+A E+PQ +A Y
Sbjct: 408  SDYCAHMDAFSWVNRDSYLPQGSRGLKAVTVAKLGYDPDELDPELMTRYASERPQTLAEY 467

Query: 430  SVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVICPN 489
            SVSDAVATYYLYM YVHPFIFSL TIIP+SPDEVLRKG+GTLCEMLLMVQAY+ N+I PN
Sbjct: 468  SVSDAVATYYLYMKYVHPFIFSLCTIIPLSPDEVLRKGTGTLCEMLLMVQAYQHNIILPN 527

Query: 490  KHQSDPEKFYRNHLLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQLLNNLDRDLQ 549
            KH    E FY  HLL+SETY+GGHVE +E+GVFRSD+P +F ++ SA ++LL +LD  L+
Sbjct: 528  KHTDPNESFYEGHLLDSETYVGGHVESIEAGVFRSDIPVNFTVETSAIDELLRDLDAALE 587

Query: 550  YAIKVEGKMDLESVSNYDEVKNAIMEKLLRLQEEPIREECPLIYHLDVAAMYPNIILTNR 609
            ++I VE K  +E V NY EVK  I E+LL L+  P R E P IYHLDVA+MYPNI+ TNR
Sbjct: 588  FSITVEEKKSMEDVVNYSEVKAQITERLLNLKNCPNRNERPSIYHLDVASMYPNIMTTNR 647

Query: 610  LQPPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYYHLKKQIESE-FVDGT 668
            LQP S++ +  C ACDFNRPGKTC R+L W WRGE    KR +Y  +++ +E+E F   T
Sbjct: 648  LQPDSMIRESDCAACDFNRPGKTCDRRLPWSWRGEFLPAKRDEYNMIRRAVENEKFPGKT 707

Query: 669  NGHLSKSFLDLPKMEQQSRLKDRLKKYCQKAYKRVLDKPVTELREAGICMRENSFYVDTV 728
              H  +SF  L + EQ + +K RL++Y +K Y ++ +    E REA IC REN FYVDTV
Sbjct: 708  KNHPLRSFESLDESEQATIVKKRLQEYSKKIYHKIRETRTIE-REAIICQRENPFYVDTV 766

Query: 729  RSFRDRRYEYKGLNKVWKGKLSEAKASGNS-IKIQEAQDMVVLYDSLQLAHKCILNSFYG 787
            R+FRDRRY++KG  KVWKGK+   K+SG +  +I+EA+ MVVL+DSLQLAHK ILNSFYG
Sbjct: 767  RNFRDRRYDFKGKQKVWKGKVESLKSSGAANSEIEEAKKMVVLFDSLQLAHKVILNSFYG 826

Query: 788  YVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLPGSFPENFT 847
            YVMRKG+RWYSMEMAGV   TGA IIQ AR L+E+IG+PLELDTDGIWC+LPG+FPENF 
Sbjct: 827  YVMRKGSRWYSMEMAGVTCLTGAHIIQMARELVERIGRPLELDTDGIWCMLPGTFPENFV 886

Query: 848  FKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEFEVDGPYK 907
            FK  +  KKL ISYPCVMLN  V    TN QYQTL DP +  Y THS+ SI FEVDGPY+
Sbjct: 887  FKLVN-GKKLAISYPCVMLNHLVHGRFTNHQYQTLSDPSTFKYTTHSDNSIFFEVDGPYR 945

Query: 908  AMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFLHGST 967
            AMILP SKEE   +KKRYAVFN DG+LAELKGFE+KRRGELKLIKVFQ ++F  FL GST
Sbjct: 946  AMILPTSKEEDKNLKKRYAVFNHDGSLAELKGFEVKRRGELKLIKVFQTQIFKFFLEGST 1005

Query: 968  IEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLADYGEQKSCAVTTAR 1027
            +EE Y AVA VANRWLD+LD  G  +AD ELID I E+ +MSK++ +YG QKS ++TTA+
Sbjct: 1006 LEETYGAVAEVANRWLDVLDMHGSTLADEELIDMICENRSMSKTIEEYGSQKSTSITTAK 1065

Query: 1028 RLSDFLGDTMVKDKGLRCQYIVACEPQGTPVSERAVPVAIFETDAEIMKFYLRKWCKT-S 1086
            RL++FLG+ M+KDKGL C+YI++  P+ +P++ERA+PVAIF  +  I +F+LRKW K   
Sbjct: 1066 RLAEFLGEQMIKDKGLNCKYIISAAPRNSPITERAIPVAIFSAEENIKRFFLRKWLKEDP 1125

Query: 1087 SDVGIRSIVDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLYKKVREKEDKFR 1146
             D+  R+I+DW YY +RL S IQK+ITIPAA+QK+SNPVPRV HPDWL +++  KED+F+
Sbjct: 1126 GDMDPRTIIDWDYYLERLGSMIQKLITIPAALQKISNPVPRVAHPDWLQRRINTKEDRFK 1185

Query: 1147 QRKLVDIFSSLKKDDFLNKTCNAETNLMDENVE---DLEDFPKKRRNSVNGPRPIVRCFE 1203
            Q+K+ D+F+        N   N  TN+MD  +    D+ED  ++                
Sbjct: 1186 QKKMTDLFTK-------NPLANISTNIMDHRIPSAGDIEDMIQR---------------- 1222

Query: 1204 VNNEQKTVKTTDQVDSLRQQLEPSE-VSDQQPSSQNAIDTENIDRIVDYKGWLELKKRKW 1262
              +++   ++ +++  ++++  P +  + Q P +       +ID+  +Y+ WL  +K+KW
Sbjct: 1223 -GSQKPGTQSGNKL--IQKRKAPGDNTTSQDPFASLPPVMPSIDK--NYEDWLRYQKQKW 1277

Query: 1263 KDNLDRRKKQKLGSLRASHQANGVSESLGDMINHKEAQRRTGVGSYFRRQETAMTRCHWQ 1322
            K     R +++                   +   K+      +GS+FR Q        WQ
Sbjct: 1278 KIQKQARLRRR------------------KLFGAKKTAASDSIGSFFRNQAELTYVNTWQ 1319

Query: 1323 IIQLVPSSQSGVFLAWVVVEGIMVRIPITVPRLFYLNSKD---PIVEKFPG---RRVNKT 1376
            I+QL  +S  G   A+V+++  +  I I +PR  ++N KD   P V+  PG   ++VN T
Sbjct: 1320 ILQLRETSSPGEVRAFVLIDRKVHTITIKIPRQIFINFKDVDLPDVD-IPGCSVQKVNHT 1378

Query: 1377 LPHGRRSFNLIEVMIDEDQFRKESKKLAALLADPEVE 1413
            LP+G  S +L ++ ++E+ + +E+ K++ LL  P VE
Sbjct: 1379 LPNGHPSVHLFQLSMEEEIYLREASKISLLLNHPSVE 1415



 Score =  211 bits (537), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 159/633 (25%), Positives = 286/633 (45%), Gaps = 75/633 (11%)

Query: 1408 ADPEVEVLGWQQNAAKIGMQRCAASSQWFNERISLARYAHI------------------- 1448
            +D E+  LGWQ  AA+  +    A   W N  +  ARY  +                   
Sbjct: 1611 SDNELPPLGWQPYAARQIVMHYLALDSWINHLLGFARYGSVPIGNLEKDDPKHLIDILYA 1670

Query: 1449 ---------LWISDDGVPDLGGTSEEDECFA--DEVHQPVLTYPGAYRKVSVELKIHHLS 1497
                     LW S   +PD GG  E+D      + V    +   GAY  V +EL++ +L+
Sbjct: 1671 RQLEQNNVVLWWSASPLPDHGGY-EKDNILGPLNSVEMTSVNIAGAYSTVCIELEVRNLA 1729

Query: 1498 VNALLKSNQVNEMEGG--GLF-----GFDQDMNSGPYNNELCGFDETTSSAPAFRVVKQL 1550
            +N +L S+ ++++E     L      G  Q ++ G        + +T  SA    V++ +
Sbjct: 1730 INTVLTSSLISDLENNEPALLNPTAPGDQQTISDG----SGVLYSDTAFSAAGILVLRDM 1785

Query: 1551 IQRCLTDAVTSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEFRK 1610
            ++    +A   GN  AD ++QHL RW+ S    L+D  LH+ +  +++K    L+  F++
Sbjct: 1786 VKSWWNEAC-KGNGMADVMVQHLIRWVESADCCLYDHALHQYMQMILKKSLQQLIMAFKR 1844

Query: 1611 LGATIIFANFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLFMD 1670
            +G+ +I+AN +++I+ T K ++  A AY   +L++++ + LF +++++   +W  L++ D
Sbjct: 1845 VGSNVIYANPNRLILQTTKTEVGNAYAYSKYILQSIKEKPLFHFLDIDIKEYWDYLIWYD 1904

Query: 1671 QYNYGGIPARADESLDDDSQVDIVSSWNIAEYLPKEIQDHFVLVVSEFMYIPWKHAQKLA 1730
            Q+NYGG      ++  +  + D   + +  E    +I  H     S   Y+   H  K  
Sbjct: 1905 QFNYGG------KACQEVVEADKARAGSHHELADLQIFTH----PSAVCYVELMHGLKKP 1954

Query: 1731 ASRASLQEGSSCTPSITVAAAENFES-HIVQYVKGEISSYFTGKLLSIVR----DAIHHM 1785
            A      +G+     +     +  ES  I   +    S     ++  ++R    + +H  
Sbjct: 1955 APVNGGADGTPRQTQLPFRPEDESESVEITSVLSQSFSKALKKQVAGLIRRQRDEMLHPE 2014

Query: 1786 KKMNNDQHNSPGVMQTAANIHKVDAPLEFIKHVCAAFALDQNVQHDVLVMRKNLLKYVRV 1845
               + D    PG M      H+ +  LE +K++     L ++   +V ++R++LL    +
Sbjct: 2015 LASDYDFPVLPGAMPPK---HERNPTLELVKYLMQVLGLSKHTALEVRLLRRDLLALFDI 2071

Query: 1846 REFAPEAEFRDPCPSFILPNVICSYCNDCRDLDLCRDMALLAQD------------WHCA 1893
            REF+ E +F  P  S +L  +IC  C   RDLDLCRD  LL +             W C 
Sbjct: 2072 REFSDEGKFESPSSSLVLSQIICHNCTMARDLDLCRDPELLPESGTEHKVSTTLPPWTC- 2130

Query: 1894 MPQCGQPYDREVMENALLQIVRQRERLYHLQDLVCIRCNQVKAAHLAEQCACAGSFRCKE 1953
             P C   YDR  +E  ++  V+     +  QDL C +C  +      E C+C+G +    
Sbjct: 2131 -PYCSTEYDRLFLEERIIGEVQGLVMEWQAQDLKCAKCAGIMVNPFMEHCSCSGEWVETI 2189

Query: 1954 DASDFRSKMQIFLNIANRQGFQLLQECTSWILE 1986
            D      +++++ +IA+  GF++L   T  +LE
Sbjct: 2190 DRRATEKRLRVYKSIADFYGFKMLSMVTKGVLE 2222


>gi|156370293|ref|XP_001628405.1| predicted protein [Nematostella vectensis]
 gi|156215381|gb|EDO36342.1| predicted protein [Nematostella vectensis]
          Length = 2250

 Score = 1388 bits (3593), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 702/1411 (49%), Positives = 957/1411 (67%), Gaps = 44/1411 (3%)

Query: 23   AEEELEAKLGYDLFSEGDKRLGWLLTFASSSLEDEDTRKVYSCIDLYFVSQDGSTFKSKY 82
            +++ ++ K G++   +  ++LGWL+    + + D+D +K+ S +DLYF+  DG  F+   
Sbjct: 11   SQDVMDNKYGFERHKDATEKLGWLINMHPTEILDDD-KKLISALDLYFIQDDGERFRVAL 69

Query: 83   KFRPYFYAATKEKMEMDVEAYLRRRYESQIADIEILEKEDLDLKNHLSGLHKSYLKISFD 142
             F+PYFY   K+  + +V  +L R++   IA IE ++KEDLDL NHL GL ++Y+K+SF 
Sbjct: 70   PFKPYFYILAKKDTDREVATWLNRKFGGAIAKIETVQKEDLDLYNHLVGLKRNYIKLSFH 129

Query: 143  TVQQLMDVKKDLLHVVERNQAKFDAAEAYESILTGKR---------EQRPQDFLDCIVDL 193
            TV  LM +K++++  V +N+ +      Y S+++G            +R  D  + I+D+
Sbjct: 130  TVNDLMKIKREIMPAVNKNKEQAKNTPVY-SMISGANGFDDKEDSTHKRVTDQKENIIDI 188

Query: 194  REYDVPYHIRFAIDNDVRCGQWYDVSI-SSTGPLLEKRVDLLQRAEVHVCAFDIETTKLP 252
            REYDVPYH+R AID  +  G WY   +     P + +R DLL R +  V AFDIETTKLP
Sbjct: 189  REYDVPYHVRVAIDLKIHVGHWYTAKVRGGLYPEIIRRDDLLDRPDPVVLAFDIETTKLP 248

Query: 253  LKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNVNNEIE 312
            LKFPD+  D IMMISYM+DGQG+LIINRE V EDIED EYTPKPE+EG F   N  +E  
Sbjct: 249  LKFPDSATDSIMMISYMIDGQGFLIINREIVSEDIEDFEYTPKPEYEGQFTCINEPDEEG 308

Query: 313  LLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDKNQGECRAKF 372
            LLR +F H+ EVKP I+VTYNGD FDWPF+E RA+HHG  M EE+GF  D + GE +++ 
Sbjct: 309  LLRRFFEHILEVKPNIFVTYNGDSFDWPFVEARASHHGINMMEEIGFSPD-SAGEYKSRP 367

Query: 373  ACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQMMASYSVS 432
            A H+D F WVKRDSYLP GSQ LKA TKAKL YDP+E++PE+M R A E+PQ +++YSVS
Sbjct: 368  AIHMDAFRWVKRDSYLPVGSQNLKATTKAKLRYDPIELDPEEMCRMASEQPQELSNYSVS 427

Query: 433  DAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVICPNKHQ 492
            DAVATYYLYM YVHPFIF+L TIIPM PDEVLRKGSGTLCE LLMVQA+ AN+I PNK +
Sbjct: 428  DAVATYYLYMKYVHPFIFALCTIIPMEPDEVLRKGSGTLCEALLMVQAFHANIIFPNKQE 487

Query: 493  SDPEKFYRN-HLLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQLLNNLDRDLQYA 551
                K   + H+L+SETY+GGHVE LESGVFRSD+P  F+L P A+++L+++++  +++A
Sbjct: 488  QVFNKLTNDGHVLDSETYVGGHVEALESGVFRSDIPCRFRLVPEAFQKLIDSVENTMKHA 547

Query: 552  IKVEGKMDLESVSNYDEVKNAIMEKLLRLQEEPIREECPLIYHLDVAAMYPNIILTNRLQ 611
            I+ E K+  ++V N+DEV N I  KL  L++ P R E PLIYHLDV AMYPNIILTNRLQ
Sbjct: 548  IEEEEKIPFDTVINFDEVCNDIKAKLGSLRDTPARLENPLIYHLDVGAMYPNIILTNRLQ 607

Query: 612  PPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYYHLKKQIESEFVDGTN-G 670
            P ++V +  C ACDFN+PG  C R + W WRGE     R++Y  +++Q+E+E + G N G
Sbjct: 608  PSAMVDEATCAACDFNKPGSQCQRAMTWTWRGEYMPASRNEYQTIRQQLEAERIPGLNPG 667

Query: 671  HLSKSFLDLPKMEQQSRLKDRLKKYCQKAYKRVLDKPVTELREAGICMRENSFYVDTVRS 730
               +SF  L   EQ    K RL+ YC KAY+++    + E R+  IC RENSFYVDTVR+
Sbjct: 668  DAPRSFHQLSTAEQAQMEKKRLQDYCHKAYRKIRVTRIEE-RQTTICQRENSFYVDTVRA 726

Query: 731  FRDRRYEYKGLNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHKCILNSFYGYVM 790
            FRDRRYE+KGL KVWK KL  A  SG+  +I+  +   VLYDSLQLAHKCILNSFYGYVM
Sbjct: 727  FRDRRYEFKGLLKVWKRKLGTAVQSGDPEEIKSCKSKEVLYDSLQLAHKCILNSFYGYVM 786

Query: 791  RKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLPGSFPENFTFKT 850
            RKGARWYSMEMAG+V +TGA II  AR ++E+IG+PLELDTDGIWCVLP SFPEN+   T
Sbjct: 787  RKGARWYSMEMAGIVCHTGANIITRAREIVEQIGRPLELDTDGIWCVLPASFPENYQVVT 846

Query: 851  KDLKK-KLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEFEVDGPYKAM 909
             + KK K+ ISYP  MLN+ V  + TNDQY  L DP +  Y+  +E SI FEVDGPYKAM
Sbjct: 847  TNPKKSKVAISYPGAMLNIMVKTHFTNDQYHELSDPENLMYDIRAENSIFFEVDGPYKAM 906

Query: 910  ILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFLHGSTIE 969
            ILPASKEEG  +KKRYAVFN+DG+LAELKGFE+KRRGEL+LIK FQ+ +F++FL G T++
Sbjct: 907  ILPASKEEGKKLKKRYAVFNEDGSLAELKGFEVKRRGELQLIKNFQSSVFEQFLQGKTLD 966

Query: 970  ECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLADYGEQKSCAVTTARRL 1029
            E Y AVA VAN WLD+L ++ +++ D+EL D I E+ +MSK+L +YGEQKS +++TA+RL
Sbjct: 967  EVYQAVAKVANFWLDVLYSKAQNMPDNELFDLICENRSMSKTLEEYGEQKSTSISTAKRL 1026

Query: 1030 SDFLGDTMVKDKGLRCQYIVACEPQGTPVSERAVPVAIFETDAEIMKFYLRKWCKTSSDV 1089
            ++FLGD MVKDKGL C++I++ +P+G+PV+ERA+P+AIF+T+  + K YLR+W K +S V
Sbjct: 1027 AEFLGDQMVKDKGLSCKFIISKKPEGSPVTERAIPLAIFQTEDGVRKHYLRRWLKDNSLV 1086

Query: 1090 G--IRSIVDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLYKKVREKEDKFRQ 1147
               IR I+DW YY +RL+SAIQKIITIPAA+Q VSNPVPR +HP WL+K++ EK D F+Q
Sbjct: 1087 SFDIREILDWEYYIERLNSAIQKIITIPAALQGVSNPVPRCIHPPWLHKRLLEKNDVFKQ 1146

Query: 1148 RKLVDIFSSLKKDDFLNKTCNAETNLMDENVEDLEDFPKKRRNSVNG-PRPIVRCFEVNN 1206
            +++ ++FS L   +  +    A + + D  +ED+ +      ++ NG  RP+    +   
Sbjct: 1147 QRISEMFSRLPPKEGHSSGGPASSQVTD--IEDMAN--GGTASATNGLIRPVATKRKRGY 1202

Query: 1207 EQKTVKTTDQVDSLRQQLEPSEVSDQ---QPSSQNAIDTENIDRIVDYKGWLELKKRKWK 1263
            +     TT        Q++ S+   +    P      D E          W+  +K+KW 
Sbjct: 1203 DDGDTPTTGTGKGYLDQIDLSKSWRELLGDPPKWGPSDEEK-------NAWVAFQKKKWA 1255

Query: 1264 DNLDRRKKQKLGSLRASHQANGVSESLGDMINHKEAQRRTGVGSYFRRQETAMTRCHWQI 1323
                +R ++K   LR      G++ + G           TG+ S+ R++   +    WQI
Sbjct: 1256 HQARQRAERK--RLRKEATDMGMTFTSG-------GSATTGLSSFIRQKTRTLLDTPWQI 1306

Query: 1324 IQLVPSSQSGVFLAWVVVEGIMVRIPITVPRLFYLNSKDPIVEKFP-GRRVNKTLPHGRR 1382
            +Q+  +   G+F  W ++   +  + + +PR+ Y+NS+ P  E+    R+V++TLP    
Sbjct: 1307 VQIAETPTPGLFRVWSLIGSDLHAVKVNIPRILYINSRTPREEEGTMWRKVSRTLPRSHA 1366

Query: 1383 SFNLIEVMIDEDQFRKESKKLAALLADPEVE 1413
            + +L E  + E  F + S  LA  L+ PE+E
Sbjct: 1367 AIHLYEYSVKETLFTEHSSALATDLSSPEIE 1397



 Score =  361 bits (927), Expect = 2e-96,   Method: Compositional matrix adjust.
 Identities = 204/590 (34%), Positives = 319/590 (54%), Gaps = 46/590 (7%)

Query: 1442 LARYAHILWISDDGVPDLGGTSEEDE---CFADEVHQPVLTYPGAYRKVSVELKIHHLSV 1498
            L ++ HILW+S    PDLGG  ++D       DEV        G Y  V VEL I  L+V
Sbjct: 1655 LQKHNHILWMSPTDRPDLGGKEDDDNRLGLMTDEVESVEFNSSGCYPTVCVELSIDGLAV 1714

Query: 1499 NALLKSNQVNEMEGGGLFG--FD-------QDMNSGPYNN--ELCGFDETTSSAPAFRVV 1547
            N +L+S  +N+ EGG   G  FD       +++  G  N    L  +DE    + AFR++
Sbjct: 1715 NTILQSAHINDFEGGAGTGISFDNLPQASLEELVQGGSNTATSLTTYDEAALCSTAFRIL 1774

Query: 1548 KQLIQRCLTDAVTSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAE 1607
            K ++   L +     N +ADA L H YRWL SP + L+DP L R++ ++++K+F  L+ E
Sbjct: 1775 KGMVHSWLHEVSAYQNQYADAQLMHFYRWLSSPSAMLYDPALCRMVQRMIKKLFLQLVGE 1834

Query: 1608 FRKLGATIIFANFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLL 1667
            F++LG+TIIFA+FSK+II T K  +S A AY D +LK++Q+++LF  I++ P   W  L+
Sbjct: 1835 FKRLGSTIIFASFSKIIISTKKRSVSDALAYVDFILKSIQSKDLFHSIDITPTSCWEYLM 1894

Query: 1668 FMDQYNYGGI----PARAD---ESLDDDSQV------------DIVSSWNIAEYLPK--E 1706
            ++D+ N+GG+    P+  D   E+ DD+  V            +I  +WNI +YLP    
Sbjct: 1895 WLDKANHGGVRGKLPSDEDTNGETEDDEDDVLPCTPENNNEDGEIEMNWNIVKYLPTGAS 1954

Query: 1707 IQDHFVLVVSEFMYIPWKHAQK----LAASRASLQEGSSCTPSITVAAAENFESHIVQYV 1762
             Q+ F +V++  ++  +KHA +    +      ++     + S     +     H V + 
Sbjct: 1955 CQNFFQIVIAGHIHAMYKHALEERRIIEPGTTPIRRRGGSSQSQRAKESSTTPGH-VNFA 2013

Query: 1763 KGEISSYFTGKLLSIVRDAIHHMK--KMNNDQHNSPGVMQTAANIHKVDAPLEFIKHVCA 1820
            +  I    T +L SI +   H +   + +N   +S   +   +++   +  LEF+ +VC 
Sbjct: 2014 QERIQGEMTQQLFSITQKIQHTLSGDRSSNKDPSSEFPILPGSHLPLNNPALEFVNYVCK 2073

Query: 1821 AFALDQNVQHDVLVMRKNLLKYVRVREFAPEAEFRDPCPSFILPNVICSYCNDCRDLDLC 1880
              ALD N  H V  +R++LLK + + EF+ EA F+DPC SF+LP VIC YCN CRDLDLC
Sbjct: 2074 VLALDSNTHHQVNKLRRDLLKLIGIGEFSQEATFKDPCLSFVLPEVICEYCNACRDLDLC 2133

Query: 1881 RDMALLAQDWH----CAMPQCGQPYDREVMENALLQIVRQRERLYHLQDLVCIRCNQVKA 1936
            RD  ++  + +    C  P C   Y+ E +E+ L+  V++R   Y LQDL C++C  +K 
Sbjct: 2134 RDPCIVPAEGNKPASCQCPNCLNEYNMEAIEHQLISAVQKRSMGYVLQDLKCVKCKGIKD 2193

Query: 1937 AHLAEQCACAGSFRCKEDASDFRSKMQIFLNIANRQGFQLLQECTSWILE 1986
            ++++  C CAG+F       DF  KM+ F NIA      +L E   WI++
Sbjct: 2194 SNMSRYCKCAGNFTHTSSVDDFAEKMKTFRNIARHYTMTMLLETVEWIMK 2243


>gi|449666318|ref|XP_002168196.2| PREDICTED: DNA polymerase epsilon catalytic subunit A-like, partial
            [Hydra magnipapillata]
          Length = 1432

 Score = 1388 bits (3593), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 716/1428 (50%), Positives = 968/1428 (67%), Gaps = 61/1428 (4%)

Query: 10   DGRRTKKQKLIRSAEEELEAKLGYDLFSEGDKRLGWLLTFASSSLEDEDTRKVYSCIDLY 69
            DG   + + L    ++ ++AK G+    +  ++ G L+    + ++DED +K+ S +D Y
Sbjct: 8    DGSGIEARLLSTIKKDSVDAKYGFTKHKDPVEKCGGLINMHPTEIQDED-KKLLSAVDYY 66

Query: 70   FVSQDGSTFKSKYKFRPYFYAATKEKMEMDVEAYLRRRYESQIADIEILEKEDLDLKNHL 129
            F+  DG+ FK    F PYFY A KE  E ++  YL ++Y   IA IE +EKEDLDL NHL
Sbjct: 67   FIQDDGNRFKVSLPFNPYFYIAAKEGTERELATYLNKKYAGLIASIETVEKEDLDLLNHL 126

Query: 130  SGLHKSYLKISFDTVQQLMDVKKDLLHVVERNQAKFDAAEAYESILTGKREQR------P 183
            +GL KSY+K+SF   ++ M ++K++  ++++N+ +  A   Y +++TG  +         
Sbjct: 127  TGLKKSYIKLSFYNEKEQMKLRKEIQPLIKKNKEREKAYSTY-TMVTGNTDSNNDGTSSK 185

Query: 184  QDFLDCIVDLREYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLLEKRV--DLLQRAEVHV 241
             + +D I+D+RE+DVPYH+R +ID  +  G WY V +   G  +  ++  +LL R +  V
Sbjct: 186  TNLMDNILDIREFDVPYHVRVSIDLKIFVGHWYKVKVHG-GLNVSIKICPELLHRPDPVV 244

Query: 242  CAFDIETTKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGY 301
             AFDIETTKLPLKFPD+  D IMMISYM+DGQGYLI NRE V EDIED EYTP+PE+EG 
Sbjct: 245  MAFDIETTKLPLKFPDSAIDSIMMISYMVDGQGYLITNREIVSEDIEDFEYTPRPEYEGP 304

Query: 302  FKVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQC 361
            F + N  +E  LLR WF H+ E+KP I+VTYNGD+FDWPF++ RA  +G  M EE+GF  
Sbjct: 305  FIIFNEPDEASLLRRWFDHILELKPNIFVTYNGDFFDWPFIDARAKVYGISMIEEIGFSP 364

Query: 362  DKNQGECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKE 421
            D  Q E ++ +  H+D F WV+RDSYLP GSQ LKAVTKAKL Y+P+EV+PEDMVR   E
Sbjct: 365  DA-QKEYKSTYGIHMDAFRWVQRDSYLPVGSQNLKAVTKAKLRYNPVEVDPEDMVRMTSE 423

Query: 422  KPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAY 481
            +P+ MASYSVSDAVATYYLYM YVHPFIF+L TIIPM PDE+LRKGSGTLCE LLMV+A+
Sbjct: 424  QPREMASYSVSDAVATYYLYMQYVHPFIFALCTIIPMEPDEILRKGSGTLCEALLMVEAF 483

Query: 482  KANVICPNKHQSDPEKFYRNHLLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQLL 541
             AN+I PNK +    KFY  HLLE+ETY+GGHVE LESGVFRSD+P  F++ P A++ L+
Sbjct: 484  HANIIFPNKQEQIHTKFYDGHLLETETYVGGHVEALESGVFRSDIPCKFRMVPEAFQGLI 543

Query: 542  NNLDRDLQYAIKVEGKMDLESVSNYDEVKNAIMEKLLRLQEEPIREECPLIYHLDVAAMY 601
            +N    L+  I+ E  + ++ V+N DE+   I ++L  L++ P R E PLIYHLDVAAMY
Sbjct: 544  DNCYETLKTTIENEHGVPIDCVTNIDELCKEICDQLATLRDTPNRLEKPLIYHLDVAAMY 603

Query: 602  PNIILTNRLQPPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYYHLKKQIE 661
            PNIILTNRLQP ++V + +C +CDFNRPG  C RK+ W+WRG+       +Y ++K+Q+E
Sbjct: 604  PNIILTNRLQPSALVDEVICASCDFNRPGARCQRKMTWMWRGDFSPANYGEYQNIKQQLE 663

Query: 662  SEFVDGT-NGHLSKSFLDLPKMEQQSRLKDRLKKYCQKAYKRVLDKPVTELREAGICMRE 720
             E   G      ++SF  L   EQ    K RL  Y  KAYK+V     +E+RE+ IC RE
Sbjct: 664  VEKHPGRFPNEPTRSFHKLSPFEQAVLEKKRLSAYSHKAYKKV-KITKSEVRESIICQRE 722

Query: 721  NSFYVDTVRSFRDRRYEYKGLNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHKC 780
            N+FY+DTVR+FRDRRYE+K L KVWK K+S AK  G+  +I+ A  M VLYDSLQLAHKC
Sbjct: 723  NAFYIDTVRAFRDRRYEFKDLLKVWKNKVSAAKDKGDPAEIKYASGMEVLYDSLQLAHKC 782

Query: 781  ILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLPG 840
            ILNSFYGYVMRKG+RW+SMEMAG+V YTGA II  AR L+E+IG+PLELDTDGIWC+LP 
Sbjct: 783  ILNSFYGYVMRKGSRWFSMEMAGIVCYTGAHIITAARELVEQIGRPLELDTDGIWCILPA 842

Query: 841  SFPENFTFKTKDLKK-KLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIE 899
            SFPENF  KT  LKK K+TISYP  MLN  V    TNDQY  L++P    Y+  SE SI 
Sbjct: 843  SFPENFQVKTTHLKKPKITISYPGAMLNYIVQSGFTNDQYHDLINPEHLEYKVRSENSIF 902

Query: 900  FEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELF 959
            FEVDGPYKAMILPASKEEG  +KKRYAVFN+DGTLAELKGFE+KRRGEL+LIK+FQ+ +F
Sbjct: 903  FEVDGPYKAMILPASKEEGKKLKKRYAVFNEDGTLAELKGFEVKRRGELQLIKIFQSSVF 962

Query: 960  DKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLADYGEQK 1019
            + FL G ++E  YS VA  A+ WLD+L ++G+ + D+EL + ISE+ +MS+SL DYG QK
Sbjct: 963  ESFLEGKSLESVYSCVAKCADYWLDVLYSKGETLPDNELFELISENRSMSRSLDDYGSQK 1022

Query: 1020 SCAVTTARRLSDFLGDTMVKDKGLRCQYIVACEPQGTPVSERAVPVAIFETDAEIMKFYL 1079
            S +++TA+RL++FLGD MVKDKGL C++I++C+P+G+P++ERA+P+AIF+T+  I K YL
Sbjct: 1023 STSISTAKRLAEFLGDQMVKDKGLSCRFIISCKPEGSPITERAIPLAIFQTEDSIKKHYL 1082

Query: 1080 RKWCKTSS--DVGIRSIVDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLYKK 1137
            ++W K     D  IR+I+DW+YY  RL+S IQKIITIPAAMQ ++NPVPR  HPDWL+K+
Sbjct: 1083 KRWLKVQDNFDFDIRNILDWNYYIDRLNSCIQKIITIPAAMQGIANPVPRCRHPDWLHKR 1142

Query: 1138 VREKEDKFRQRKLVDIFSSLKKDDFLNKTCNAETNLMDENVEDLEDFPKKRRNSVNGPR- 1196
            + EK D F+Q+++ D+FS + +   L      E+      V DLED   KR  S+  P  
Sbjct: 1143 LLEKNDVFQQKRITDMFSKVPEVSVL----QIESLFCCICVTDLEDIVGKR--SLTSPSM 1196

Query: 1197 PIV---RCFEVNNEQKTVKTTDQVDSLRQQLEPSEVSDQQPSSQNAIDTENIDRIVDYKG 1253
            P+V   R  + N E      +D + S R+ L         P S  A          D   
Sbjct: 1197 PVVHKRRKVDKNVENSEFMESDLLKSWREVL-------GSPPSMGATKE-------DQHA 1242

Query: 1254 WLELKKRKW-----KDNLDRRKKQKLGSLRASHQANGVSESLGDMINHKEAQRRTGVGSY 1308
            W+   KRKW     + N  R+ ++KL       + + ++++ GD+   +    + G+ ++
Sbjct: 1243 WILFHKRKWLFQKLQRNAARKSREKL-------KNSNMADNFGDI---RRVNPQAGLSNF 1292

Query: 1309 FRRQETAMTRCHWQIIQLVPSSQSGVFLAWVVVEGIMVRIPITVPRLFYLNSKDPIVEKF 1368
            F++Q  ++  CHW+IIQ+  +   G+F  +V+V   +  I +TVPR+FY+NS+   ++  
Sbjct: 1293 FKKQTRSILECHWEIIQIAETDTPGIFNLFVMVNNDLHSINVTVPRVFYVNSRK--LKSG 1350

Query: 1369 PG---RRVNKTLPHGRRSFNLIEVMIDEDQFRKESKKLAALLADPEVE 1413
             G   R+VNK LP  + SF L E  I E  ++  S +L A L+ P++E
Sbjct: 1351 DGATWRKVNKILPRSQPSFFLYEYSIPEVIYKDYSSELVADLSSPDIE 1398


>gi|327308576|ref|XP_003238979.1| DNA polymerase epsilon catalytic subunit A [Trichophyton rubrum CBS
            118892]
 gi|326459235|gb|EGD84688.1| DNA polymerase epsilon catalytic subunit A [Trichophyton rubrum CBS
            118892]
          Length = 2231

 Score = 1387 bits (3589), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 709/1416 (50%), Positives = 949/1416 (67%), Gaps = 82/1416 (5%)

Query: 27   LEAKLGYDLFSEGDKRLGWLLTFASSSLEDEDTRKVYSCIDLYFVSQDGSTFKSKYKFRP 86
            ++  +G+  +  G KR+GWL    S+++ED       + ++ YF+ ++G +FK+  ++ P
Sbjct: 53   IDETMGFARYEAGKKRIGWLCNMHSTTIEDSKVPGGRAAVEFYFLEENGGSFKAAVEYDP 112

Query: 87   YFYAATKEKMEMDVEAYLRRRYESQIADIEILEKEDLDLKNHLSGLHKSYLKISFDTVQQ 146
            YF  ATK+  E +VE + +R +E  +  ++++EKEDL + NHL G  + +L++SF  V  
Sbjct: 113  YFLIATKQGREAEVEEWCKRTFEELVKGVKVVEKEDLKMPNHLLGYKRKFLQLSFSNVSD 172

Query: 147  LMDVKKDLLHVVERNQAKFDAAEAYESILTG-------------KREQRPQDFLDCIVDL 193
            L+ V+K +  +  +N+   +A + Y  + +              + +   QD  D IVD+
Sbjct: 173  LLAVRKTIFPIAVKNRKNVNAMDTYAELASANAGFDLFDDDSNNRGQNSLQDAADYIVDI 232

Query: 194  REYDVPYHIRFAIDNDVRCGQWYDVSISS---TGPLLEKRVDLLQRAEVHVCAFDIETTK 250
            REYDVPYH+R +ID D+R G+WY V       T   LE+R   LQRA+  V A+DIETTK
Sbjct: 233  REYDVPYHVRVSIDKDIRIGKWYTVQTIHGLITLTCLEER---LQRADPVVLAYDIETTK 289

Query: 251  LPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNVNNE 310
            LPLKFPDA  D IMM+SYM+DG+GYLI NRE V EDI D EYTPKPE+ G F + N  +E
Sbjct: 290  LPLKFPDAAIDQIMMVSYMIDGRGYLITNREIVSEDINDFEYTPKPEYPGPFTIFNEPDE 349

Query: 311  IELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDKNQGEC-R 369
              +L  +F+H++E KP + VTYNGD+FDWPF+E RA+  G  M  E+GF+  KN  +  R
Sbjct: 350  KAVLERFFSHIKEAKPSVMVTYNGDFFDWPFVEARASVQGIDMYAEIGFR--KNSEDIYR 407

Query: 370  AKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQMMASY 429
            + +  H+D F+WV RDSYLPQGS+GLKAVT AKLGYDP E++PE M R+A E+PQ +A Y
Sbjct: 408  SDYCAHMDAFSWVNRDSYLPQGSRGLKAVTVAKLGYDPDELDPELMTRYASERPQTLAEY 467

Query: 430  SVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVICPN 489
            SVSDAVATYYLYM YVHPFIFSL TIIP++PDEVLRKG+GTLCEMLLMVQAY+ N+I PN
Sbjct: 468  SVSDAVATYYLYMKYVHPFIFSLCTIIPLNPDEVLRKGTGTLCEMLLMVQAYQHNIILPN 527

Query: 490  KHQSDPEKFYRNHLLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQLLNNLDRDLQ 549
            KH    E FY  HLL+SETY+GGHVE +E+GVFRSD+P +F ++ +A ++LL +LD  L+
Sbjct: 528  KHTDPNESFYEGHLLDSETYVGGHVESIEAGVFRSDIPVNFTVETAAIDELLRDLDAALE 587

Query: 550  YAIKVEGKMDLESVSNYDEVKNAIMEKLLRLQEEPIREECPLIYHLDVAAMYPNIILTNR 609
            ++I VE K  +E V NY EVK  IME+LL L+  P R E P IYHLDVA+MYPNI+ TNR
Sbjct: 588  FSITVEEKKSMEDVVNYSEVKAQIMERLLNLKNCPNRNERPSIYHLDVASMYPNIMTTNR 647

Query: 610  LQPPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYYHLKKQIESE-FVDGT 668
            LQP S++ +  C ACDFNRPGKTC R+L W WRGE    KR +Y  +++ +E+E F   T
Sbjct: 648  LQPDSMINESDCAACDFNRPGKTCDRRLPWSWRGEFLPAKRDEYNMIRRAVENEKFPGKT 707

Query: 669  NGHLSKSFLDLPKMEQQSRLKDRLKKYCQKAYKRVLDKPVTELREAGICMRENSFYVDTV 728
              H  +SF  L + EQ + +K RL++Y +K Y ++ +    E REA IC REN FYVDTV
Sbjct: 708  KNHPPRSFESLDESEQATIVKKRLQEYSKKIYHKIRETRTIE-REAIICQRENPFYVDTV 766

Query: 729  RSFRDRRYEYKGLNKVWKGKLSEAKASGNS-IKIQEAQDMVVLYDSLQLAHKCILNSFYG 787
            R+FRDRRY++KG  KVWKGK+   K+SG +  +I+EA+ MVVL+DSLQLAHK ILNSFYG
Sbjct: 767  RNFRDRRYDFKGKQKVWKGKVESLKSSGAANSEIEEAKKMVVLFDSLQLAHKVILNSFYG 826

Query: 788  YVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLPGSFPENFT 847
            YVMRKG+RWYSMEMAGV   TGA IIQ AR L+E+IG+PLELDTDGIWC+LPG+FPENF 
Sbjct: 827  YVMRKGSRWYSMEMAGVTCLTGAHIIQMARELVERIGRPLELDTDGIWCMLPGTFPENFV 886

Query: 848  FKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEFEVDGPYK 907
            FK  +  KKL ISYPCVMLN  V    TN QYQTL DP +  Y THS+ SI FEVDGPY+
Sbjct: 887  FKLVN-GKKLAISYPCVMLNHLVHGRFTNHQYQTLSDPSTFKYTTHSDNSIFFEVDGPYR 945

Query: 908  AMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFLHGST 967
            AMILP SKEE   +KKRYAVFN DG+LAELKGFE+KRRGELKLIKVFQ ++F  FL GST
Sbjct: 946  AMILPTSKEEDKNLKKRYAVFNHDGSLAELKGFEVKRRGELKLIKVFQTQIFKFFLEGST 1005

Query: 968  IEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLADYGEQKSCAVTTAR 1027
            +EE Y AVA VANRWLD+LD  G  +AD ELID I E+ +MSK++ +Y  QKS ++TTA+
Sbjct: 1006 LEETYGAVAEVANRWLDVLDMHGSTLADEELIDMICENRSMSKTIEEYSGQKSTSITTAK 1065

Query: 1028 RLSDFLGDTMVKDKGLRCQYIVACEPQGTPVSERAVPVAIFETDAEIMKFYLRKWCKT-S 1086
            RL++FLG+ M+KDKGL C+YI++  P+ +P++ERAVPVAIF  +  I +F+LRKW K   
Sbjct: 1066 RLAEFLGEQMIKDKGLNCKYIISAAPRNSPITERAVPVAIFSAEENIKRFFLRKWLKEDP 1125

Query: 1087 SDVGIRSIVDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLYKKVREKEDKFR 1146
             D+  R+I+DW YY +RL S IQK+ITIPAA+QK+SNPVPRV HPDWL +++  KED+F+
Sbjct: 1126 GDMDPRTIIDWDYYLERLGSVIQKLITIPAALQKISNPVPRVAHPDWLQRRINTKEDRFK 1185

Query: 1147 QRKLVDIFSSLKKDDFLNKTCNAETNLMDENVE---DLEDFPKKRRNSVNGPRPIVRCFE 1203
            Q+K+ DIF+        N   N  TN+MD  +    D+ED  ++R               
Sbjct: 1186 QKKMTDIFTK-------NPLANISTNIMDHRIPSAGDIEDIMQRR--------------- 1223

Query: 1204 VNNEQKTVKTTDQVDSLRQQLEPSEVSDQQPSSQNAIDTENIDRIVDYKGWLELKKRKWK 1263
                QK    +      +++      + Q P +       +ID+  +Y+ WL  +K+KWK
Sbjct: 1224 ---SQKPGTQSGNKLIQKRKAPGDNTTFQDPFASLPPVMPSIDK--NYEDWLRYQKQKWK 1278

Query: 1264 DNLDRRKKQKLGSLRASHQANGVSESLGDMINHKEAQRRTGVGSYFRRQETAMTRCHWQI 1323
                 R +++                   +   K+      +GS+FR Q        WQI
Sbjct: 1279 IQKQARLRRR------------------KLFGAKKTATSDSIGSFFRNQAELTYVNTWQI 1320

Query: 1324 IQLVPSSQSGVFLAWVVVEGIMVRIPITVPRLFYLNSKD---PIVEKFPG---RRVNKTL 1377
            +QL  +S  G   A+V+++  +  I I +PR  ++N KD   P V+   G   ++VN TL
Sbjct: 1321 LQLRETSSPGEVKAFVLIDRKVHTITIKIPRQIFINFKDVNLPDVD-ITGCSVQKVNHTL 1379

Query: 1378 PHGRRSFNLIEVMIDEDQFRKESKKLAALLADPEVE 1413
            P+G  S +L ++ + E+ + +E+ K++ LL  P VE
Sbjct: 1380 PNGHPSVHLFQLSMPEETYLREASKISLLLNHPSVE 1415



 Score =  228 bits (581), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 164/634 (25%), Positives = 293/634 (46%), Gaps = 70/634 (11%)

Query: 1408 ADPEVEVLGWQQNAAKIGMQRCAASSQWFNERISLARYAHI------------------- 1448
            +D E+  LGWQ  AA+  +    A   W N  +  ARY ++                   
Sbjct: 1611 SDNELPPLGWQPYAARQIVMHYLALDSWINHLLGFARYGNVPIGNLEKDDPKHLIDILYA 1670

Query: 1449 ---------LWISDDGVPDLGGTSEEDECFA--DEVHQPVLTYPGAYRKVSVELKIHHLS 1497
                     LW S   +PD GG  E+D      + V    +   GAY  V +EL++ +L+
Sbjct: 1671 RQLEQNNVVLWWSASPLPDHGGY-EKDNILGPLNSVEMTSVNIAGAYSTVCIELEVRNLA 1729

Query: 1498 VNALLKSNQVNEMEGG--GLF-----GFDQDMNSGPYNNELCGFDETTSSAPAFRVVKQL 1550
            +N +L S+ ++++E     L      G  Q ++ G        + +T  S     V++ +
Sbjct: 1730 INTVLTSSLISDLENNEPALLNPTAPGDQQTISDG----SGVLYSDTVFSTAGILVLRDM 1785

Query: 1551 IQRCLTDAVTSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEFRK 1610
            ++    +A   GN  AD ++QHL RW+ S    L+D  LH+ +  +++K    L+  F++
Sbjct: 1786 VKSWWNEAC-KGNGMADVMVQHLIRWVESADCCLYDHALHQYMQMILKKALQQLIMAFKR 1844

Query: 1611 LGATIIFANFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLFMD 1670
            +G+ +I+AN +++I+ T K ++  A AY   +L++++ + LF +++++   +W  L++ D
Sbjct: 1845 VGSNVIYANPNRLILQTTKTEVGNAYAYSKYILQSIKEKPLFHFLDIDIREYWDYLIWYD 1904

Query: 1671 QYNYGGIPARADESLDDDSQ-VDIVSSWNIAEYLPKEIQDHFVLVVSEFMYIPWKHAQKL 1729
            Q+NYGG      E ++ D Q ++ + +W I  +LP  +Q  FV  + E  Y+   H  K 
Sbjct: 1905 QFNYGG--KACQEVVEADKQELEAIMNWQICRFLPTPLQSVFVDWIVE--YVELMHGLKK 1960

Query: 1730 AASRASLQEGSSCTPSITVAAAENFES-HIVQYVKGEISSYFTGKLLSIVR----DAIHH 1784
             A      +G+     +     +  ES  I   +    S     ++  ++R    + +H 
Sbjct: 1961 PAPVNGGADGTPRQTQLPFRPEDESESVEITSVLSQSFSKALKKQVAGLIRRQRDEMLHP 2020

Query: 1785 MKKMNNDQHNSPGVMQTAANIHKVDAPLEFIKHVCAAFALDQNVQHDVLVMRKNLLKYVR 1844
                + D    PG M      H+ +  LE +K++     L +    +V ++R++LL    
Sbjct: 2021 ELASDYDFPVLPGAMPPK---HERNPTLELVKYLMQVLGLSKYTALEVRLLRRDLLALFD 2077

Query: 1845 VREFAPEAEFRDPCPSFILPNVICSYCNDCRDLDLCRDMALLAQD------------WHC 1892
            +REF+ E +F  P  S +L  +IC  C   RDLDLCRD  LL +             W C
Sbjct: 2078 IREFSDEGKFESPGSSLVLSQIICHNCTMARDLDLCRDPELLPESGTEHKVSTTLPPWTC 2137

Query: 1893 AMPQCGQPYDREVMENALLQIVRQRERLYHLQDLVCIRCNQVKAAHLAEQCACAGSFRCK 1952
              P C   YDR  +E  ++  V+     +  QDL C +C  +      E C+C+G +   
Sbjct: 2138 --PYCSTEYDRLFLEERIIGEVQGLVLEWQAQDLKCAKCAGIMINPFMEHCSCSGEWVET 2195

Query: 1953 EDASDFRSKMQIFLNIANRQGFQLLQECTSWILE 1986
             D      +++++ +IA+  GF++L   T  +LE
Sbjct: 2196 IDRRATEKRLRVYKSIADFYGFKMLSMVTKGVLE 2229


>gi|344246334|gb|EGW02438.1| DNA polymerase epsilon catalytic subunit A [Cricetulus griseus]
          Length = 2174

 Score = 1386 bits (3588), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 705/1357 (51%), Positives = 938/1357 (69%), Gaps = 64/1357 (4%)

Query: 86   PYFYAATKEKMEMDVEAYLRRRYESQIADIEILEKEDLDLKNHLSGLHKSYLKISFDTVQ 145
            PYFY A ++  + +V ++L ++++ +IA +E + KEDLDL NHL GL +SY+K+SF TV+
Sbjct: 2    PYFYIAARKGCDREVSSFLSKKFQGKIAKLENVPKEDLDLPNHLVGLKRSYIKLSFHTVE 61

Query: 146  QLMDVKKDLLHVVERNQAKFDAAEAYESILTG------------KREQRPQDFLDCIVDL 193
             L+ V+K++   V++N+ +  A++ Y ++L+             +  ++  D L+ IVD+
Sbjct: 62   DLVKVRKEISPAVKKNREQDHASDEYTTMLSSILQGGSVITDEEETSKKIADQLNNIVDM 121

Query: 194  REYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLLE--KRVDLLQRAEVHVCAFDIETTKL 251
            REYDVPYHIR +ID  +    WY+V        +E  +R DL++R +  V AFDIETTKL
Sbjct: 122  REYDVPYHIRLSIDLKIHVAHWYNVRFRGNAFPVEITRRDDLVERPDPVVLAFDIETTKL 181

Query: 252  PLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNVNNEI 311
            PLKFPDA+ D IMMISYM+DGQGYLI NRE V EDIED E+TPKPE+EG F V N  +E+
Sbjct: 182  PLKFPDAETDQIMMISYMIDGQGYLITNREIVSEDIEDFEFTPKPEYEGPFCVFNEPDEV 241

Query: 312  ELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDKNQGECRAK 371
             L++ WF H+QE KP I VTYNGD+FDWPF+E RAA HG  M +E+GFQ D +QGE +A 
Sbjct: 242  HLIQRWFEHIQETKPTIMVTYNGDFFDWPFVEARAATHGLSMYQEIGFQKD-SQGEYKAP 300

Query: 372  FACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQMMASYSV 431
               H+DC  WVKRDSYLP GS  LKA  KAKLGYDP+E++PEDM R A E+PQ +A+YSV
Sbjct: 301  QCIHMDCLRWVKRDSYLPVGSHNLKAAAKAKLGYDPVELDPEDMCRMATEQPQTLATYSV 360

Query: 432  SDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVICPNKH 491
            SDAVATYYLYM YVHPFIF+L TIIPM PDEVLRKGSGTLCE LLMVQA+ AN+I PNK 
Sbjct: 361  SDAVATYYLYMKYVHPFIFALCTIIPMEPDEVLRKGSGTLCEALLMVQAFHANIIFPNKQ 420

Query: 492  QSDPEKFYRN-HLLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQLLNNLDRDLQY 550
            + +  K   + H+L++ETY+GGHVE LESGVFRSD+P  F+++P+A++ LL  +++ +++
Sbjct: 421  EQEFNKLTDDGHVLDAETYVGGHVEALESGVFRSDIPCRFRMNPAAFDFLLQRVEKTMRH 480

Query: 551  AIKVEGKMDLESVSNYDEVKNAIMEKLLRLQEEPIREECPLIYHLDVAAMYPNIILTNRL 610
            AI+ E K+ +E V+N+ EV + I  KL  L++ P R ECPLIYHLDV AMYPNIILTNRL
Sbjct: 481  AIEEEEKVPVEQVTNFQEVCDEIKTKLTSLKDVPNRIECPLIYHLDVGAMYPNIILTNRL 540

Query: 611  QPPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYYHLKKQIESE-----FV 665
            QP +IV +  C ACDFN+PG  C RK+ W WRGE     RS+Y+ ++ Q+ESE     F 
Sbjct: 541  QPSAIVDEATCAACDFNKPGADCQRKMAWQWRGEFMPASRSEYHRIQHQLESEKFPPLFP 600

Query: 666  DGTNGHLSKSFLDLPKMEQQSRLKDRLKKYCQKAYKRVLDKPVTELREAGICMRENSFYV 725
            +G     +++F +L + EQ    K RL  YC+KAYK++    V E R   IC RENSFYV
Sbjct: 601  EGP----ARAFHELSREEQAKYEKQRLADYCRKAYKKIHMTKVEE-RLTTICQRENSFYV 655

Query: 726  DTVRSFRDRRYEYKGLNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHKCILNSF 785
            DTVR+FRDRRYE+KGL+KVWK KLS A   G++ +++  ++M +LYDSLQLAHKCILNSF
Sbjct: 656  DTVRAFRDRRYEFKGLHKVWKKKLSAAVEVGDASEVKRCKNMEILYDSLQLAHKCILNSF 715

Query: 786  YGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLPGSFPEN 845
            YGYVMRKGARWYSMEMAG+V +TGA II  AR LIE+IG+PLELDTDGIWCVLP SFPEN
Sbjct: 716  YGYVMRKGARWYSMEMAGIVCFTGANIITQARELIEQIGRPLELDTDGIWCVLPNSFPEN 775

Query: 846  FTFKTKDLKK-KLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEFEVDG 904
            F  KT ++KK KLTISYP  MLN+ V    TN QYQ L +P S TY T SE SI FEVDG
Sbjct: 776  FVIKTTNVKKPKLTISYPGAMLNIMVKEGFTNHQYQELTEPSSLTYVTRSENSIFFEVDG 835

Query: 905  PYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFLH 964
            PY AMILPASKEEG  +KKRYAVFN+DG+LAELKGFE+KRRGEL+LIK+FQ+ +F+ FL 
Sbjct: 836  PYLAMILPASKEEGKKLKKRYAVFNEDGSLAELKGFEVKRRGELQLIKIFQSSVFEAFLK 895

Query: 965  GSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLADYGEQKSCAVT 1024
            GST+EE Y +VA VA+ WLD+L ++  ++ DSEL + ISE+ +MS+ L DYGEQKS +++
Sbjct: 896  GSTLEEVYGSVAKVADYWLDVLYSKAANMPDSELFELISENRSMSRKLEDYGEQKSTSIS 955

Query: 1025 TARRLSDFLGDTMVKDKGLRCQYIVACEPQGTPVSERAVPVAIFETDAEIMKFYLRKWCK 1084
            TA+RL++FLGD MVKD GL C+YI++ +P+G+PV+ERA+P+AIF+ +  + K +LRKW K
Sbjct: 956  TAKRLAEFLGDQMVKDAGLSCRYIISRKPEGSPVTERAIPLAIFQAEPTVRKHFLRKWLK 1015

Query: 1085 TSS--DVGIRSIVDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLYKKVREKE 1142
            +SS  D  IR+I+DW YY +RL SAIQKIITIPAA+Q+V NPVPRV HPDWL+KK+ EK 
Sbjct: 1016 SSSLQDFDIRTILDWDYYIERLGSAIQKIITIPAALQQVKNPVPRVKHPDWLHKKLLEKN 1075

Query: 1143 DKFRQRKLVDIFSSLKKDDFLNKTCNAETNLMDENVEDLEDFPKKRRNSVNGPRPIVRCF 1202
            D ++Q+K+ ++F    K   +     A  + +     D+EDF   +      P       
Sbjct: 1076 DIYKQKKISELFVLEGKRQIV--MAQASESSLSVCTPDIEDFGLTKPYHSAAP------- 1126

Query: 1203 EVNNEQKTVKTTDQVDSLRQQLE-PSEVSDQQPSSQNAIDTENIDRIVDYKGWLELKKRK 1261
             V  ++K V  + Q DS    L  P +    QP S  +   E       +  WL   K+K
Sbjct: 1127 -VATKRKRVWES-QEDSQDNALTVPWQEVLGQPPSLGSTQEE-------WLVWLRFHKKK 1177

Query: 1262 W----KDNLDRRKKQKLGSLRASHQANGVSESLGDMINHKEAQRRTGVGSYFRRQETAMT 1317
            W    +  L RRKKQ L S     +   + E              TG+GS+ RR   ++ 
Sbjct: 1178 WQLQAQQRLARRKKQCLESTEDVPKLGAIREGPA-----------TGLGSFLRRTARSIL 1226

Query: 1318 RCHWQIIQLVPSSQSGVFLAWVVVEGIMVRIPITVPRLFYLNSKDPIVEKFPG-RRVNKT 1376
               WQI+Q+  ++Q+G+F  W +V   +  I +++ R+FY+N +    E+ P  R+VN+ 
Sbjct: 1227 DLPWQIVQISETNQAGLFRLWAIVGSDLHCIKLSISRVFYVNQRVAKAEEGPSYRKVNRA 1286

Query: 1377 LPHGRRSFNLIEVMIDEDQFRKESKKLAALLADPEVE 1413
            LP     +NL E  + ED +++   ++   L+ P++E
Sbjct: 1287 LPRSNMVYNLYEYSVPEDMYQEHINEINTELSAPDIE 1323



 Score =  327 bits (839), Expect = 3e-86,   Method: Compositional matrix adjust.
 Identities = 193/600 (32%), Positives = 317/600 (52%), Gaps = 61/600 (10%)

Query: 1442 LARYAHILWISDDGVPDLGGTSEEDECFA---DEVHQPVLTYPGAYRKVSVELKIHHLSV 1498
            L R+ H+LW+S    PDLGG   +D       D+     +   G Y  V +EL I +L+V
Sbjct: 1576 LQRHNHLLWLSPTSRPDLGGKEADDNRLVMEFDDRATVEINNSGCYSTVCMELDIQNLAV 1635

Query: 1499 NALLKSNQVNEMEGGGLFG--FD-------QDMNSG-PYNNELCGFDETTSSAPAFRVVK 1548
            N +L+S+ +N+MEG G  G  FD       +DM +G    +    +DET   +  FR++K
Sbjct: 1636 NTILQSHHINDMEGAGSMGISFDVIQQASLEDMVTGNQAASAPASYDETALCSSTFRILK 1695

Query: 1549 QLIQRCLTDAVTSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEF 1608
             ++   + +     N++AD  + H YRWL SP S LHDP LHR LH +M+K+F  L+AEF
Sbjct: 1696 SMVVGWVKEITQYHNIYADNQVMHFYRWLQSPCSLLHDPALHRTLHNMMKKLFLQLIAEF 1755

Query: 1609 RKLGATIIFANFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLF 1668
            ++LG+++++ANF+++I+ T K  +  A  Y + +  ++ ++E+F  + +     W  LL+
Sbjct: 1756 KRLGSSVVYANFNRIILCTKKRRIEDALGYVEYITNSIHSKEIFHSLTISFSRCWEFLLW 1815

Query: 1669 MDQYNYGGIPARADESL---DDDSQVD---------------------IVSSWNIAEYLP 1704
            MD  NYGGI  +   S+     DSQ                       + ++WNI ++LP
Sbjct: 1816 MDPSNYGGIKGKVPSSIHCGQQDSQEREETKDEEDEEEGMEESEVEDLLENNWNILQFLP 1875

Query: 1705 K--EIQDHFVLVVSEFMYIPWKHAQK-----LAASRASLQEGSSCTPSITVAAAENFESH 1757
            +    Q +F+++VS ++   + H+ K      A     ++   +   S     A      
Sbjct: 1876 QAASCQSYFLMIVSAYIVAVY-HSMKNELRHSAPGSTPVKRKGASQFSQEAKGASGALPG 1934

Query: 1758 IVQYVKGEISSYFTGKLLSIVRDAIHHMKKMNNDQHNS-PGVM---QTAANIHKVDAPLE 1813
            +V + +  +++  T    +I +      KK+   + ++ P  M      +++   +  LE
Sbjct: 1935 MVTFSQNYVANELTQSFFTITQKI---QKKVTGSRSSTEPSEMFPVLPGSHLLLNNPALE 1991

Query: 1814 FIKHVCAAFALDQNVQHDVLVMRKNLLKYVRVREFAPEAEFRDPCPSFILPNVICSYCND 1873
            FIK+VC   +LD N+ + V  + ++LL+ V V EF+ EA+FRDPC S++LP VIC  CN 
Sbjct: 1992 FIKYVCKVLSLDTNITNQVNKLNRDLLRLVDVGEFSEEAQFRDPCHSYVLPEVICHSCNF 2051

Query: 1874 CRDLDLCRDM------ALLAQDWHCAMPQCGQPYDREVMENALLQIVRQRERLYHLQDLV 1927
            CRDLDLC+D       A+L Q W C+   C  PY+  V+E+AL++ ++++   + LQDLV
Sbjct: 2052 CRDLDLCKDSSFSQDGAILPQ-WLCS--NCQAPYNSAVIESALVEALQRKLMAFTLQDLV 2108

Query: 1928 CIRCNQVKAAHLAEQCACAGSFRCKEDASDFRSKMQIFLNIANRQGFQLLQECTSWILEV 1987
            C++C  +K  H+   C CAG F       DF  +++IF NIA       LQE  +W+L+ 
Sbjct: 2109 CLKCRGMKETHMPVYCNCAGDFVLTIHTKDFMEQIRIFQNIAKHYNMSYLQETIAWLLQT 2168


>gi|395840162|ref|XP_003792934.1| PREDICTED: DNA polymerase epsilon catalytic subunit A isoform 2
            [Otolemur garnettii]
          Length = 2257

 Score = 1385 bits (3586), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 718/1442 (49%), Positives = 965/1442 (66%), Gaps = 101/1442 (7%)

Query: 8    RQDGRRTKKQKLIRSAEEELEAKL----GYDLFSEGDKRLGWLLTFASSSLEDEDTRKVY 63
            R DG  +    L R    +   K+    G++   E  ++ GWL+     +L         
Sbjct: 21   RDDGPSSSASVLKRLERSQWTDKMDLLFGFERLKEPGEKTGWLINMHPVAL--------- 71

Query: 64   SCIDLYFVSQDGSTFKSKYKFRPYFYAATKEKMEMDVEAYLRRRYESQIADIEILEKEDL 123
                                ++PYFY AT++  E +V ++L ++++ +IA +E + KEDL
Sbjct: 72   -------------------PYKPYFYIATRKGCEREVSSFLSKKFQGKIAKVETVPKEDL 112

Query: 124  DLKNHLSGLHKSYLKISFDTVQQLMDVKKDLLHVVERNQAKFDAAEAYESILTG------ 177
            DL NHL GL ++Y+K+SF TV+ L+ V+K++   V++NQ +  A++AY ++L+       
Sbjct: 113  DLPNHLVGLKRNYVKLSFHTVEDLVKVRKEISPAVKKNQEQDHASDAYTAMLSSVLQRGS 172

Query: 178  ------KREQRPQDFLDCIVDLREYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLLE--K 229
                  +  ++  D LD I+D+REYDVPYHIR +ID  +    WY+V        +E  +
Sbjct: 173  VITDEEETSKKIADQLDNIMDMREYDVPYHIRLSIDLKIHVAHWYNVRHRGNAFPVEITR 232

Query: 230  RVDLLQRAEVHVCAFDIETTKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIED 289
            R DL++R +  V AFDIETTKLPLKFPD + D IMMISYM+DGQGYLI NRE V EDIED
Sbjct: 233  RDDLVERPDPVVLAFDIETTKLPLKFPDPETDQIMMISYMIDGQGYLITNREIVSEDIED 292

Query: 290  LEYTPKPEFEGYFKVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHH 349
             E+TPKPE+EG F V N  +E+ L++ WF H+QE KP I VTYNGD+FDWPF+E RAA H
Sbjct: 293  FEFTPKPEYEGPFCVFNEPDEVHLIQRWFEHVQETKPTIMVTYNGDFFDWPFVEARAAVH 352

Query: 350  GFKMSEELGFQCDKNQGECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLE 409
            G  M +E+GFQ D +QGE +A    H+DC  WVKRDSYLP GS  LKA  KAKLGYDP+E
Sbjct: 353  GISMHQEIGFQKD-SQGEYKAPSCIHMDCLRWVKRDSYLPVGSHNLKAAAKAKLGYDPVE 411

Query: 410  VNPEDMVRFAKEKPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSG 469
            ++PEDM R A E+PQ +A+YSVSDAVATYYLYM YVHPFIF+L TIIPM PDEVLRKGSG
Sbjct: 412  LDPEDMCRMATEQPQTLATYSVSDAVATYYLYMKYVHPFIFALCTIIPMEPDEVLRKGSG 471

Query: 470  TLCEMLLMVQAYKANVICPNKHQSDPEKFYRN-HLLESETYIGGHVECLESGVFRSDLPT 528
            TLCE LLMVQA+ AN+I PNK + +  K   + H+L++ETY+GGHVE LESGVFRSD+P 
Sbjct: 472  TLCEALLMVQAFHANIIFPNKQEQELNKLTADGHVLDAETYVGGHVEALESGVFRSDIPC 531

Query: 529  SFKLDPSAYEQLLNNLDRDLQYAIKVEGKMDLESVSNYDEVKNAIMEKLLRLQEEPIREE 588
             F+++P+A++ LL  +++ +++A++ E K+ +E V+N+ EV + I  KL  L++ P R E
Sbjct: 532  RFRMNPTAFDFLLQQVEKTMRHAVEEEEKVPVEQVTNFQEVCDQIKTKLTSLKDVPNRIE 591

Query: 589  CPLIYHLDVAAMYPNIILTNRLQPPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEIFMG 648
            CPLIYHLDV AMYPNIILTNRLQP +IV +  C ACDFN+PG  C RK+ W WRGE    
Sbjct: 592  CPLIYHLDVGAMYPNIILTNRLQPSAIVDEATCAACDFNKPGANCQRKMAWQWRGEFMPA 651

Query: 649  KRSDYYHLKKQIESE-----FVDGTNGHLSKSFLDLPKMEQQSRLKDRLKKYCQKAYKRV 703
             RS+Y+ ++ Q+ESE     F +G     +++F +L + EQ    K RL  YC+KAYKR+
Sbjct: 652  SRSEYHRIQHQLESEKFPSLFPEGP----ARAFHELSREEQAKYEKKRLADYCRKAYKRI 707

Query: 704  LDKPVTELREAGICMRENSFYVDTVRSFRDRRYEYKGLNKVWKGKLSEAKASGNSIKIQE 763
                V E R   IC RENSFYVDTVR+FRDRRYE+KGL+KVWK KLS A  +G++ +++ 
Sbjct: 708  HITKV-EDRLTTICQRENSFYVDTVRAFRDRRYEFKGLHKVWKKKLSAAMEAGDAAELKR 766

Query: 764  AQDMVVLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKI 823
             ++M VLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAG+V +TGA II  AR LIE+I
Sbjct: 767  CKNMEVLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGIVCFTGANIITQARELIEQI 826

Query: 824  GKPLELDTDGIWCVLPGSFPENFTFKTKDLKK-KLTISYPCVMLNVDVARNNTNDQYQTL 882
            G+PLELDTDGIWCVLP SFPENF  KT + KK ++TISYP  MLN+ V    TNDQYQ L
Sbjct: 827  GRPLELDTDGIWCVLPNSFPENFVLKTTNAKKPRVTISYPGAMLNILVKEGFTNDQYQEL 886

Query: 883  VDPVSKTYETHSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEI 942
             +P S TY T SE SI FEVDGPY AMILPASKEEG  +KKRYAVFN+DG+LAELKGFE+
Sbjct: 887  AEPSSLTYVTRSENSIFFEVDGPYLAMILPASKEEGKKLKKRYAVFNEDGSLAELKGFEV 946

Query: 943  KRRGELKLIKVFQAELFDKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYI 1002
            KRRGEL+LIK+FQ+ +F+ FL GST+EE YS+VA VA+ WLD+L ++  ++ DSEL + I
Sbjct: 947  KRRGELQLIKIFQSSVFEAFLKGSTLEEVYSSVAKVADYWLDVLYSKAANMPDSELFELI 1006

Query: 1003 SESSTMSKSLADYGEQKSCAVTTARRLSDFLGDTMVKDKGLRCQYIVACEPQGTPVSERA 1062
            SE+ +MS+ L DYGEQKS +++TA+RL++FLGD MVKD GL C+YI++  P+G+PV+ERA
Sbjct: 1007 SENRSMSRKLEDYGEQKSTSISTAKRLAEFLGDQMVKDAGLSCRYIISRRPEGSPVTERA 1066

Query: 1063 VPVAIFETDAEIMKFYLRKWCKTSS--DVGIRSIVDWSYYKQRLSSAIQKIITIPAAMQK 1120
            +P+AIF+ +  + K +LRKW K+SS  D  IR+I+DW YY +RL SAIQKIITIPAA+Q+
Sbjct: 1067 IPLAIFQAEPTVRKHFLRKWLKSSSLQDFDIRTILDWDYYIERLGSAIQKIITIPAALQQ 1126

Query: 1121 VSNPVPRVVHPDWLYKKVREKEDKFRQRKLVDIFSSLKKDDFLNKTCNAETNLMDENVED 1180
            V NPVPRV HPDWL++K+ EK D ++Q+K+ ++F    +   +     A        + D
Sbjct: 1127 VKNPVPRVKHPDWLHRKLLEKNDIYKQKKISELFILEGRRQVM--MAQAPEGSARPGIAD 1184

Query: 1181 LEDFPKKRRNSVNGPRPIVRCFEVNNEQKTVKTTDQVDS--LRQQLEPSEVSDQQPSSQN 1238
            +EDF          P P +    +  ++K V    Q DS  L   +   E+  Q P    
Sbjct: 1185 MEDF-----GLTQPPHPPL---PIATKRKRVLWESQEDSQDLALTVPWQEILGQPP---- 1232

Query: 1239 AIDTENIDRIVDYKGWLELKKRKW----KDNLDRRKKQKLGSLRASHQANGVSESLGDMI 1294
            A+ T   + +V    WL   K+KW    +    RRK+Q L             E  GDM 
Sbjct: 1233 ALGTTQAEWLV----WLGFHKKKWQLQARQRHTRRKRQHL-------------ELAGDMP 1275

Query: 1295 NHKEAQ--RRTGVGSYFRRQETAMTRCHWQIIQLVPSSQSGVFLAWVVVEGIMVRIPITV 1352
                 +     G+GS+ RR   ++    WQI+Q+  +SQ+G+F  W ++   +  I +++
Sbjct: 1276 RPGALRDGPAAGLGSFLRRTARSILDLPWQIVQISETSQAGLFRLWAIIGSDLHCIKLSI 1335

Query: 1353 PRLFYLNSKDPIVEKFPG-RRVNKTLPHGRRSFNLIEVMIDEDQFRKESKKLAALLADPE 1411
            PR+F++N +    E+ P  R+VN+ LP     +NL E  + ED +++   ++   L+ P+
Sbjct: 1336 PRVFFVNQRVAKAEEGPSYRKVNRVLPRSNTVYNLYEYSVPEDMYQEHINEINTELSAPD 1395

Query: 1412 VE 1413
            +E
Sbjct: 1396 IE 1397



 Score =  317 bits (813), Expect = 3e-83,   Method: Compositional matrix adjust.
 Identities = 186/605 (30%), Positives = 307/605 (50%), Gaps = 64/605 (10%)

Query: 1442 LARYAHILWISDDGVPDLGGTSEEDECFADEVHQPVLT---YPGAYRKVSVELKIHHLSV 1498
            L R+ H+LW+S    PDLGG   +D     E  +  +      G Y  V VEL + +L+V
Sbjct: 1650 LQRHNHLLWLSPTARPDLGGKEADDSRLVMEFDEQAIVEINSSGCYSTVCVELDLQNLAV 1709

Query: 1499 NALLKSNQVNEMEGGGLFGFDQD----------MNSGPYNNELCGFDETTSSAPAFRVVK 1548
            N +L+S+ VN+MEG    G   D          +  G   +    +DET   +  FR++K
Sbjct: 1710 NTILQSHHVNDMEGADSMGISFDVIQQASLEDMITGGQATSTPASYDETALCSNTFRILK 1769

Query: 1549 QLIQRCLTDAVTSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEF 1608
             ++   + +     N++AD  + H YRWL SP S L+DP LHR LH +M+K+F  L+AEF
Sbjct: 1770 SMVVGWVKEITQYHNIYADNQVMHFYRWLRSPSSLLYDPALHRTLHNMMKKLFLQLIAEF 1829

Query: 1609 RKLGATIIFANFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLF 1668
            ++LG+++I+ANF+++I+ T K  +  A AY + +  ++ ++E+F  + +     W  LL+
Sbjct: 1830 KRLGSSVIYANFNRIILCTKKRRIEDAMAYVEYITSSIHSKEIFHSLTISFSRCWEFLLW 1889

Query: 1669 MDQYNYGGIPARADESL----------------------DDDSQVDI-----------VS 1695
            MD  NYGGI  +   S+                      DD  + D+            +
Sbjct: 1890 MDPSNYGGIKGKVSPSVHFWQQETQKAEGTAGKESEEEEDDIGEPDVEQPEPDVEELLEN 1949

Query: 1696 SWNIAEYLPK--EIQDHFVLVVSEFMYIPWKHAQKLAASRAS-----LQEGSSCTPSITV 1748
            +WNI ++LP+    Q +F+++VS ++   + H+ K    R++     ++  S+   S   
Sbjct: 1950 NWNILQFLPQAASCQSYFLMIVSAYIVAVY-HSMKEGLRRSAPGSTPMKRRSASQLSQET 2008

Query: 1749 AAAENFESHIVQYVKGEISSYFTGKLLSIVRDAIHHMKKMNNDQHNSPGVMQTAANIHKV 1808
                     ++ + +  +++  T    +I +     +    N    S        +   +
Sbjct: 2009 EGTAGALPGMITFSQDYVANELTQSFFTITQKIQKKVTGSRNSTELSEMFPHLPGSHLLL 2068

Query: 1809 DAP-LEFIKHVCAAFALDQNVQHDVLVMRKNLLKYVRVREFAPEAEFRDPCPSFILPNVI 1867
            + P LEFIK+VC   +LD N+ + V  + ++LL+ V V EF+ EA+FRDPC S++LP VI
Sbjct: 2069 NNPALEFIKYVCKVLSLDTNITNQVNKLNRDLLRLVDVGEFSEEAKFRDPCRSYVLPEVI 2128

Query: 1868 CSYCNDCRDLDLCRDM------ALLAQDWHCAMPQCGQPYDREVMENALLQIVRQRERLY 1921
            C  CN CRDLDLC+D       A+L Q W C+   C   YD   +E AL++ ++++   +
Sbjct: 2129 CHSCNFCRDLDLCKDSSFSQDGAILPQ-WLCS--NCQAAYDLSTIEMALVEALQKKLMAF 2185

Query: 1922 HLQDLVCIRCNQVKAAHLAEQCACAGSFRCKEDASDFRSKMQIFLNIANRQGFQLLQECT 1981
             LQDL+C++C+ VK  ++   C CAG+F        F  ++ IF NIA   G   L E  
Sbjct: 2186 TLQDLICLKCHGVKETNMPVHCGCAGAFTPTIHTQVFMEQIGIFRNIAQLYGMSYLLETL 2245

Query: 1982 SWILE 1986
             W+L+
Sbjct: 2246 DWLLQ 2250


>gi|302501137|ref|XP_003012561.1| hypothetical protein ARB_01174 [Arthroderma benhamiae CBS 112371]
 gi|291176120|gb|EFE31921.1| hypothetical protein ARB_01174 [Arthroderma benhamiae CBS 112371]
          Length = 2231

 Score = 1385 bits (3585), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 709/1417 (50%), Positives = 957/1417 (67%), Gaps = 84/1417 (5%)

Query: 27   LEAKLGYDLFSEGDKRLGWLLTFASSSLEDEDTRKVYSCIDLYFVSQDGSTFKSKYKFRP 86
            ++  +G+  +  G KR+GWL    S+++ED       + ++ YF+ ++G +FK+  ++ P
Sbjct: 53   IDETMGFARYEAGKKRIGWLCNMHSTTIEDPKVPGGRAAVEFYFLEENGGSFKAAVEYDP 112

Query: 87   YFYAATKEKMEMDVEAYLRRRYESQIADIEILEKEDLDLKNHLSGLHKSYLKISFDTVQQ 146
            YF  ATK   E +VE + +R +E  +  ++++EKEDL + NHL G  + +L++SF  V  
Sbjct: 113  YFLIATKRGHEAEVEEWCKRTFEELLKGVKVVEKEDLKMPNHLLGYKRKFLQLSFANVSD 172

Query: 147  LMDVKKDLLHVVERNQAKFDAAEAYESILTG-------------KREQRPQDFLDCIVDL 193
            L+ V+K +  +  +N+   +A + Y  + +              + +   QD  D IVD+
Sbjct: 173  LLAVRKTVFPIAVKNRKNVNAMDTYAELASANAGFDLFDDDSNNRGQNSLQDAADYIVDI 232

Query: 194  REYDVPYHIRFAIDNDVRCGQWYDV-SISS--TGPLLEKRVDLLQRAEVHVCAFDIETTK 250
            REYDVPYH+R +ID D+R G+WY V SI    T   LE+R   LQRA+  V A+DIETTK
Sbjct: 233  REYDVPYHVRVSIDKDIRIGKWYTVQSIHGLITLTCLEER---LQRADPVVLAYDIETTK 289

Query: 251  LPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNVNNE 310
            LPLKFPDA  D +MMISYM+DG+GYLI NRE V EDI D EYTPKPE+ G F + N  +E
Sbjct: 290  LPLKFPDAAIDQVMMISYMIDGRGYLITNREIVSEDINDFEYTPKPEYPGPFTIFNEPDE 349

Query: 311  IELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDKNQGEC-R 369
              +L  +F+H++E KP + VTYNGD+FDWPF+E RA+  G  M  E+GF+  KN  +  +
Sbjct: 350  KAVLERFFSHIKEAKPSVMVTYNGDFFDWPFVEARASVQGIDMYAEIGFR--KNSEDIYQ 407

Query: 370  AKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQMMASY 429
            + +  H+D F+WV RDSYLPQGS+GLKAVT AKLGYDP E++PE M R+A E+PQ +A Y
Sbjct: 408  SDYCAHMDAFSWVNRDSYLPQGSRGLKAVTVAKLGYDPDELDPELMTRYASERPQTLAEY 467

Query: 430  SVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVICPN 489
            SVSDAVATYYLYM YVHPFIFSL TIIP++PDEVLRKG+GTLCEMLLMVQAY+ N+I PN
Sbjct: 468  SVSDAVATYYLYMKYVHPFIFSLCTIIPLNPDEVLRKGTGTLCEMLLMVQAYQHNIILPN 527

Query: 490  KHQSDPEKFYRNHLLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQLLNNLDRDLQ 549
            KH    E FY  HLL+SETY+GGHVE +E+GVFRSD+P +F ++  A ++LL +LD  L+
Sbjct: 528  KHTDPNESFYEGHLLDSETYVGGHVESIEAGVFRSDIPVNFTVETGAIDELLRDLDAALE 587

Query: 550  YAIKVEGKMDLESVSNYDEVKNAIMEKLLRLQEEPIREECPLIYHLDVAAMYPNIILTNR 609
            ++I VE K  +E V NY EVK  I E+L+ L+  P R E P IYHLDVA+MYPNI+ TNR
Sbjct: 588  FSITVEEKKSMEDVVNYSEVKAQITERLMNLKNCPNRNERPSIYHLDVASMYPNIMTTNR 647

Query: 610  LQPPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYYHLKKQIESE-FVDGT 668
            LQP S++ +  C ACDFNRPGKTC R+L W WRGE    KR +Y  +++ +E+E F   T
Sbjct: 648  LQPDSMIKESDCAACDFNRPGKTCDRRLPWSWRGEFLPAKRDEYNMIRRAVENEKFPGKT 707

Query: 669  NGHLSKSFLDLPKMEQQSRLKDRLKKYCQKAYKRVLDKPVTELREAGICMRENSFYVDTV 728
              H  +SF  L + EQ + +K RL++Y +K Y ++ +    E REA IC REN FYVDTV
Sbjct: 708  KNHPPRSFESLDESEQATIVKKRLQEYSKKIYHKIRETRTIE-REAIICQRENPFYVDTV 766

Query: 729  RSFRDRRYEYKGLNKVWKGKLSEAKASGNS-IKIQEAQDMVVLYDSLQLAHKCILNSFYG 787
            R+FRDRRY++KG  KVWKGK+   KASG +  +I+EA+ MVVL+DSLQLAHK ILNSFYG
Sbjct: 767  RNFRDRRYDFKGKQKVWKGKVEALKASGAANSEIEEAKKMVVLFDSLQLAHKVILNSFYG 826

Query: 788  YVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLPGSFPENFT 847
            YVMRKG+RWYSMEMAGV   TGA IIQ AR L+E+IG+PLELDTDGIWC+LPG+FPENF 
Sbjct: 827  YVMRKGSRWYSMEMAGVTCLTGAHIIQMARELVERIGRPLELDTDGIWCMLPGTFPENFV 886

Query: 848  FKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEFEVDGPYK 907
            FK  +  KKL ISYPCVMLN  V    TN QYQTL DP +  Y THS+ SI FEVDGPY+
Sbjct: 887  FKLVN-GKKLAISYPCVMLNHLVHGRFTNHQYQTLSDPSTFKYTTHSDNSIFFEVDGPYR 945

Query: 908  AMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFLHGST 967
            AMILP SKEE   +KKRYAVFN DG+LAELKGFE+KRRGELKLIKVFQ ++F  FL G+T
Sbjct: 946  AMILPTSKEEDKNLKKRYAVFNHDGSLAELKGFEVKRRGELKLIKVFQTQIFKFFLEGTT 1005

Query: 968  IEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLADYGEQKSCAVTTAR 1027
            +EE Y AVA VANRWLD+LD  G  +AD ELID I E+ +MSK++ +YG QKS ++TTA+
Sbjct: 1006 LEETYGAVAEVANRWLDVLDMHGSTLADEELIDMICENRSMSKTIEEYGGQKSTSITTAK 1065

Query: 1028 RLSDFLGDTMVKDKGLRCQYIVACEPQGTPVSERAVPVAIFETDAEIMKFYLRKWCKT-S 1086
            RL++FLG+ M+KDKGL C+YI++  P+ +P++ERAVPVAIF  +  I +F+LRKW K   
Sbjct: 1066 RLAEFLGEQMIKDKGLNCKYIISAAPRNSPITERAVPVAIFSAEENIKRFFLRKWLKEDP 1125

Query: 1087 SDVGIRSIVDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLYKKVREKEDKFR 1146
             D+  R+I+DW YY +RL S IQK+ITIPAA+QK+SNPVPRV HPDWL +++  KED+F+
Sbjct: 1126 GDMDPRTIIDWDYYLERLGSVIQKLITIPAALQKISNPVPRVAHPDWLQRRINTKEDRFK 1185

Query: 1147 QRKLVDIFSSLKKDDFLNKTCNAETNLMDENV---EDLEDFPKKRRNSVNGPRPIVRCFE 1203
            QRK+ D+F+        N   N  TN+MD  +    D+ED  ++R               
Sbjct: 1186 QRKMTDLFTK-------NPLANISTNIMDHRIPSTADIEDMMQRR--------------- 1223

Query: 1204 VNNEQKTVKTTDQVDSLRQQLEPSE-VSDQQPSSQNAIDTENIDRIVDYKGWLELKKRKW 1262
              N++   ++ +++  ++++  P +  + Q P +       +ID+  +Y+ WL  +K+KW
Sbjct: 1224 --NQKPGTQSGNKL--IQKRKTPGDNTTSQDPFASLPPVMPSIDK--NYEDWLRYQKQKW 1277

Query: 1263 KDNLDRRKKQKLGSLRASHQANGVSESLGDMINHKEAQRRTGVGSYFRRQETAMTRCHWQ 1322
            K     R +++                   +   K+      +GS+FR Q        WQ
Sbjct: 1278 KIQKQARLRRR------------------KLFGAKKTAASDSIGSFFRNQAELTYVNTWQ 1319

Query: 1323 IIQLVPSSQSGVFLAWVVVEGIMVRIPITVPRLFYLNSKD---PIVEKFPG---RRVNKT 1376
            I+QL  +S  G   A+V+++  +  I I +PR  ++N KD   P V+   G   ++VN T
Sbjct: 1320 ILQLRETSSPGEVRAFVLIDRKVHTINIKIPRQIFINFKDVDLPDVD-ITGCTVQKVNHT 1378

Query: 1377 LPHGRRSFNLIEVMIDEDQFRKESKKLAALLADPEVE 1413
            LP+G  S +L ++ + E+ + +E+ K++ LL  P VE
Sbjct: 1379 LPNGHPSVHLFQLSMPEETYLREASKISLLLNHPSVE 1415



 Score =  230 bits (587), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 165/634 (26%), Positives = 294/634 (46%), Gaps = 70/634 (11%)

Query: 1408 ADPEVEVLGWQQNAAKIGMQRCAASSQWFNERISLARYAHI------------------- 1448
            +D E+  LGWQ  AA+  +    A   W N  +  ARY ++                   
Sbjct: 1611 SDNELPPLGWQPYAARQIVVHYLALDSWINHLLGFARYGNVPIGNLEKDDPKHLIDILYA 1670

Query: 1449 ---------LWISDDGVPDLGGTSEEDECFA--DEVHQPVLTYPGAYRKVSVELKIHHLS 1497
                     LW S   +PD GG  E+D      + V    +   GAY  V +EL++ +L+
Sbjct: 1671 RQLEQNNVVLWWSASPLPDHGGY-EKDNILGPLNSVEMTSVNIAGAYSTVCIELEVRNLA 1729

Query: 1498 VNALLKSNQVNEMEGG--GLF-----GFDQDMNSGPYNNELCGFDETTSSAPAFRVVKQL 1550
            +N +L S+ ++++E     L      G  Q ++ G        + +T  SA    V++ +
Sbjct: 1730 INTVLTSSLISDLENNEPALLNPTAPGGQQTISDG----SGVLYSDTAFSAAGILVLRDM 1785

Query: 1551 IQRCLTDAVTSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEFRK 1610
            ++    +A   GN  AD ++QHL RW+ S    L+D  LH+ +  +++K    L+  F++
Sbjct: 1786 VKSWWNEAC-KGNGMADVMVQHLIRWVESADCCLYDHALHQYMQMILKKALQQLIMAFKR 1844

Query: 1611 LGATIIFANFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLFMD 1670
            +G+ +I+AN +++I+ T K ++  A AY   +L++++ + LF +++++   +W  L++ D
Sbjct: 1845 VGSNVIYANPNRLILQTTKTEVGNAYAYSKYILQSIKEKPLFHFLDIDIKEYWDYLIWYD 1904

Query: 1671 QYNYGGIPARADESLDDDSQ-VDIVSSWNIAEYLPKEIQDHFVLVVSEFMYIPWKHAQKL 1729
            Q+NYGG      E ++ D Q ++ + +W I  +LP  +Q  FV  + E  Y+   H  K 
Sbjct: 1905 QFNYGG--KACQEVVEADKQELEAIMNWQICRFLPTPLQSVFVDWIVE--YVELMHGLKK 1960

Query: 1730 AASRASLQEGSSCTPSITVAAAENFES-HIVQYVKGEISSYFTGKLLSIVR----DAIHH 1784
             A      +G+     +     +  ES  I   +    S     ++  ++R    + +H 
Sbjct: 1961 PAPVNGGADGTPRQTQLPFRPEDESESVEITSVLSQSFSKALKKQVAGLIRRQRDEMLHP 2020

Query: 1785 MKKMNNDQHNSPGVMQTAANIHKVDAPLEFIKHVCAAFALDQNVQHDVLVMRKNLLKYVR 1844
                + D    PG M      H+ +  LE +K++     L +    +V ++R++LL    
Sbjct: 2021 ELASDYDFPVLPGAMPPK---HERNPALELVKYLMQVLGLSKYTALEVRLLRRDLLALFD 2077

Query: 1845 VREFAPEAEFRDPCPSFILPNVICSYCNDCRDLDLCRDMALLAQD------------WHC 1892
            +REF+ E +F  P  S +L  +IC  C   RDLDLCRD  LL +             W C
Sbjct: 2078 IREFSDEGKFESPSSSLVLSQIICHNCTMARDLDLCRDPELLPESGTENKVSTTLPPWTC 2137

Query: 1893 AMPQCGQPYDREVMENALLQIVRQRERLYHLQDLVCIRCNQVKAAHLAEQCACAGSFRCK 1952
              P C   YDR  +E  ++  V+     +  QDL C +C  +      E C+C+G +   
Sbjct: 2138 --PYCSTEYDRLFLEERIIGEVQGLVMEWQAQDLKCAKCAGIMINPFMEHCSCSGEWVET 2195

Query: 1953 EDASDFRSKMQIFLNIANRQGFQLLQECTSWILE 1986
             D      +++++ +IA+  GF++L   T  +LE
Sbjct: 2196 IDRRATEKRLRVYKSIADFYGFKMLSMVTKGVLE 2229


>gi|303157|gb|AAA15448.1| DNA polymerase epsilon catalytic subunit [Homo sapiens]
          Length = 2257

 Score = 1385 bits (3584), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 721/1455 (49%), Positives = 973/1455 (66%), Gaps = 111/1455 (7%)

Query: 3    RRRWD--------RQDGRRTKKQKLIR----SAEEELEAKLGYDLFSEGDKRLGWLLTFA 50
            RRR D        R DG  +    L R       ++++ + G++   E  ++ GWL+   
Sbjct: 8    RRRADPGADGEASRDDGATSSVSALKRLERSQWTDKMDLRFGFERLKEPGEKTGWLINMH 67

Query: 51   SSSLEDEDTRKVYSCIDLYFVSQDGSTFKSKYKFRPYFYAATKEKMEMDVEAYLRRRYES 110
              +L                             ++PYFY AT++  E +V ++L ++++ 
Sbjct: 68   PVAL----------------------------PYKPYFYIATRKGCEREVSSFLSKKFQG 99

Query: 111  QIADIEILEKEDLDLKNHLSGLHKSYLKISFDTVQQLMDVKKDLLHVVERNQAKFDAAEA 170
            +IA +E + KEDLDL NHL GL ++Y+++SF TV+ L+ V+K++   V++N+ +  A++A
Sbjct: 100  KIAKVETVPKEDLDLPNHLVGLKRNYIRLSFHTVEDLVKVRKEISPAVKKNREQDHASDA 159

Query: 171  YESILTG------------KREQRPQDFLDCIVDLREYDVPYHIRFAIDNDVRCGQWYDV 218
            Y ++L+             +  ++  D LD IVD+REYDVPYHIR +ID  +    WY+V
Sbjct: 160  YTALLSSVLQRGGVITDEEETSKKIADQLDNIVDMREYDVPYHIRLSIDLKIHVAHWYNV 219

Query: 219  SISSTGPLLE--KRVDLLQRAEVHVCAFDIETTKLPLKFPDADYDIIMMISYMLDGQGYL 276
                    +E  +R DL++R +  V AFDIETTKLPLKFPDA+ D IMMISYM+DGQGYL
Sbjct: 220  RYRGNAFPVEITRRDDLVERPDPVVLAFDIETTKLPLKFPDAETDQIMMISYMIDGQGYL 279

Query: 277  IINRECVGEDIEDLEYTPKPEFEGYFKVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDY 336
            I NRE V EDIED E+TPKPE+EG F V N  +E  L++ WF H+QE KP I VTYNGD+
Sbjct: 280  ITNREIVSEDIEDFEFTPKPEYEGPFCVFNEPDEAHLIQRWFEHVQETKPTIMVTYNGDF 339

Query: 337  FDWPFLETRAAHHGFKMSEELGFQCDKNQGECRAKFACHLDCFAWVKRDSYLPQGSQGLK 396
            FDWPF+E RAA HG  M +E+GFQ D +QGE +A    H+DC  WVKRDSYLP GS  LK
Sbjct: 340  FDWPFVEARAAVHGLSMQQEIGFQKD-SQGEYKAPQCIHMDCLRWVKRDSYLPVGSHNLK 398

Query: 397  AVTKAKLGYDPLEVNPEDMVRFAKEKPQMMASYSVSDAVATYYLYMTYVHPFIFSLATII 456
            A   +KLGYDP+E++PE     + E+PQ +A+YSVSDAVATYYLYM YVHPFIF+L TII
Sbjct: 399  AAA-SKLGYDPVELDPETCAG-STEQPQTLATYSVSDAVATYYLYMKYVHPFIFALCTII 456

Query: 457  PMSPDEVLRKGSGTLCEMLLMVQAYKANVICPNKHQSDPEKFYRN-HLLESETYIGGHVE 515
            PM PDEVLRKGSGTLCE LLMVQA+ AN+I PNK + +  K   + H+L+SETY+GGHVE
Sbjct: 457  PMEPDEVLRKGSGTLCEALLMVQAFHANIIFPNKQEQEFNKLTDDGHVLDSETYVGGHVE 516

Query: 516  CLESGVFRSDLPTSFKLDPSAYEQLLNNLDRDLQYAIKVEGKMDLESVSNYDEVKNAIME 575
             LESGVFRSD+P  F+++P+A++ LL  +++ L++A++ E K+ +E V+N++EV + I  
Sbjct: 517  ALESGVFRSDIPCRFRMNPAAFDFLLQRVEKTLRHALEEEEKVPVEQVTNFEEVCDEIKS 576

Query: 576  KLLRLQEEPIREECPLIYHLDVAAMYPNIILTNRLQPPSIVTDEVCTACDFNRPGKTCLR 635
            KL  L++ P R ECPLIYHLDV AMYPNIILTNRLQP ++V +  C ACDFN+PG  C R
Sbjct: 577  KLASLKDVPSRIECPLIYHLDVGAMYPNIILTNRLQPSAMVDEATCAACDFNKPGANCQR 636

Query: 636  KLEWVWRGEIFMGKRSDYYHLKKQIESE-----FVDGTNGHLSKSFLDLPKMEQQSRLKD 690
            K+ W WRGE     RS+Y+ ++ Q+ESE     F +G     +++F +L + EQ    K 
Sbjct: 637  KMAWQWRGEFMPASRSEYHRIQHQLESEKFPPLFPEGP----ARAFHELSREEQAKYEKR 692

Query: 691  RLKKYCQKAYKRVLDKPVTELREAGICMRENSFYVDTVRSFRDRRYEYKGLNKVWKGKLS 750
            RL  YC+KAYK++    V E R   IC RENSFYVDTVR+FRDRRYE+KGL+KVWK KLS
Sbjct: 693  RLADYCRKAYKKIHITKVEE-RLTTICQRENSFYVDTVRAFRDRRYEFKGLHKVWKKKLS 751

Query: 751  EAKASGNSIKIQEAQDMVVLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGA 810
             A   G++ +++  ++M VLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAG+V +TGA
Sbjct: 752  AAVEVGDAAEVKRCKNMEVLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGIVCFTGA 811

Query: 811  KIIQNARLLIEKIGKPLELDTDGIWCVLPGSFPENFTFKTKDLKK-KLTISYPCVMLNVD 869
             II  AR LIE+IG+PLELDTDGIWCVLP SFPENF FKT ++KK K+TISYP  MLN+ 
Sbjct: 812  NIITQARELIEQIGRPLELDTDGIWCVLPNSFPENFVFKTTNVKKPKVTISYPGAMLNIM 871

Query: 870  VARNNTNDQYQTLVDPVSKTYETHSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFN 929
            V    TNDQYQ L +P S TY T SE SI FEVDGPY AMILPASKEEG  +KKRYAVFN
Sbjct: 872  VKEGFTNDQYQELAEPSSLTYVTRSENSIFFEVDGPYLAMILPASKEEGKKLKKRYAVFN 931

Query: 930  DDGTLAELKGFEIKRRGELKLIKVFQAELFDKFLHGSTIEECYSAVAAVANRWLDLLDNQ 989
            +DG+LAELKGFE+KRRGEL+LIK+FQ+ +F+ FL GST+EE Y +VA VA+ WLD+L ++
Sbjct: 932  EDGSLAELKGFEVKRRGELQLIKIFQSSVFEAFLKGSTLEEVYGSVAKVADYWLDVLYSK 991

Query: 990  GKDIADSELIDYISESSTMSKSLADYGEQKSCAVTTARRLSDFLGDTMVKDKGLRCQYIV 1049
              ++ DSEL + ISE+ +MS+ L DYGEQKS +++TA+RL++FLGD MVKD GL C+YI+
Sbjct: 992  AANMPDSELFELISENRSMSRKLEDYGEQKSTSISTAKRLAEFLGDQMVKDAGLSCRYII 1051

Query: 1050 ACEPQGTPVSERAVPVAIFETDAEIMKFYLRKWCKTSS--DVGIRSIVDWSYYKQRLSSA 1107
            +   +G+PV+ERA+P+AIF+ +  + K +LRKW K+SS  D  IR+I+DW YY +RL SA
Sbjct: 1052 SRNAEGSPVTERAIPLAIFQAEPTVRKHFLRKWLKSSSLQDFDIRAILDWDYYIERLGSA 1111

Query: 1108 IQKIITIPAAMQKVSNPVPRVVHPDWLYKKVREKEDKFRQRKLVDIFSSLKKDDFLNKTC 1167
            IQKIITIPAA+Q+V NPVPRV HPDWL+KK+ EK D ++Q+K+ ++F+   +        
Sbjct: 1112 IQKIITIPAALQQVKNPVPRVKHPDWLHKKLLEKNDVYKQKKISELFTLEGRRQV--TMA 1169

Query: 1168 NAETNLMDENVEDLEDFPKKRRNSVNGPRPIVRCFEVNNEQKTVKTTDQVDSLRQQLEPS 1227
             A  +    +  D+EDF       V  P P      V  ++K V    Q +S  Q L P+
Sbjct: 1170 EASEDSPRPSAPDMEDF-----GLVKLPHPAA---PVTVKRKRVLWESQEES--QDLTPT 1219

Query: 1228 ----EVSDQQPSSQNAIDTENIDRIVDYKGWLELKKRKW----KDNLDRRKKQKLGSLRA 1279
                E+  Q P    A+ T   + +V    WL   K+KW    +  L RRK+Q+L S   
Sbjct: 1220 VPWQEILGQPP----ALGTSQEEWLV----WLRFHKKKWQLQARQRLARRKRQRLESAEG 1271

Query: 1280 SHQANGVSESLGDMINHKEAQRRTGVGSYFRRQETAMTRCHWQIIQLVPSSQSGVFLAWV 1339
              +   + +              TG+GS+ RR   ++    WQI+Q+  +SQ+G+F  W 
Sbjct: 1272 VLRPGAIRDGPA-----------TGLGSFLRRTARSILDLPWQIVQISETSQAGLFRLWA 1320

Query: 1340 VVEGIMVRIPITVPRLFYLNSKDPIVEKFPG-RRVNKTLPHGRRSFNLIEVMIDEDQFRK 1398
            +V   +  I +++PR+FY+N + P  E+    R+VN+ LP     +NL E  + ED +++
Sbjct: 1321 LVGSDLHCIRLSIPRVFYVNQRVPKAEEGASYRKVNRVLPRSNMVYNLYEYSVPEDMYQE 1380

Query: 1399 ESKKLAALLADPEVE 1413
               ++ A L+ P++E
Sbjct: 1381 HINEINAELSAPDIE 1395



 Score =  317 bits (812), Expect = 4e-83,   Method: Compositional matrix adjust.
 Identities = 192/609 (31%), Positives = 305/609 (50%), Gaps = 70/609 (11%)

Query: 1442 LARYAHILWISDDGVPDLGGTSEEDECFA---DEVHQPVLTYPGAYRKVSVELKIHHLSV 1498
            L R+ H+LW+S    PDLGG   +D C     D+     +   G Y  V VEL + +L+V
Sbjct: 1648 LQRHNHLLWLSPTARPDLGGKEADDNCLVMEFDDQATVEINSSGCYSTVCVELDLQNLAV 1707

Query: 1499 NALLKSNQVNEMEGGGLFGFDQD----------MNSGPYNNELCGFDETTSSAPAFRVVK 1548
            N +L+S+ VN+MEG    G   D          +  G   +    +DET   +  FR++K
Sbjct: 1708 NTILQSHHVNDMEGADSMGISFDVIQQASLEDMITGGQAASAPASYDETALCSNTFRILK 1767

Query: 1549 QLIQRCLTDAVTSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEF 1608
             ++   + +     N++AD  + H YRWL SP S LHDP LHR LH +M+K+F  L+AEF
Sbjct: 1768 SMVVGWVKEITQYHNIYADNQVMHFYRWLRSPSSLLHDPALHRTLHNMMKKLFLQLIAEF 1827

Query: 1609 RKLGATIIFANFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLF 1668
            ++LG+++I+ANF+++I+ T K  +  A AY + +  ++ ++E F  + +     W  LL+
Sbjct: 1828 KRLGSSVIYANFNRIILCTKKRRVEDAIAYVEYITSSIHSKETFHSLTISFSRCWEFLLW 1887

Query: 1669 MDQYNYGGIPARADESLD---DDSQV-------------------------------DIV 1694
            MD  NYGGI  +    +     DSQ                                D++
Sbjct: 1888 MDPSNYGGIKGKVSSRIHCGLQDSQKAGGAEDEQENEDDEEERDGEEEEEAEESNVEDLL 1947

Query: 1695 -SSWNIAEYLPK--EIQDHFVLVVSEFMYIPWKHAQKLAASRASLQEGSSCTPSITVAAA 1751
             ++WNI ++LP+    Q++F+++VS ++   + H  K    R++   GS+       +  
Sbjct: 1948 ENNWNILQFLPQAASCQNYFLMIVSAYIVAVY-HCMKDGLRRSA--PGSTPVRRRGASQL 2004

Query: 1752 ENFESHIVQYVKGEIS---SYFTGKLLSIVRDAIHHMKKMNNDQHNSPGVMQT-----AA 1803
                   V  + G I+    Y   +L          ++K      NS  + +       +
Sbjct: 2005 SQEAEGAVGALPGMITFSQDYVANELTQSFFTITQKIQKKVTGSRNSTELSEMFPVLPGS 2064

Query: 1804 NIHKVDAPLEFIKHVCAAFALDQNVQHDVLVMRKNLLKYVRVREFAPEAEFRDPCPSFIL 1863
            ++   +  LEFIK+VC   +LD N+ + V  + ++LL+ V V EF+ EA+FRDPC S++L
Sbjct: 2065 HLLLNNPALEFIKYVCKVLSLDTNITNQVNKLNRDLLRLVDVGEFSEEAQFRDPCRSYVL 2124

Query: 1864 PNVICSYCNDCRDLDLCRDM------ALLAQDWHCAMPQCGQPYDREVMENALLQIVRQR 1917
            P VIC  CN CRDLDLC+D       A+L Q W C+   C  PYD   +E  L+++++++
Sbjct: 2125 PEVICRSCNFCRDLDLCKDSSFSEDGAVLPQ-WLCS--NCQAPYDSSAIEMTLVEVLQKK 2181

Query: 1918 ERLYHLQDLVCIRCNQVKAAHLAEQCACAGSFRCKEDASDFRSKMQIFLNIANRQGFQLL 1977
               + LQDLVC++C  VK   +   C CAG F        F  ++ IF NIA   G   L
Sbjct: 2182 LMAFTLQDLVCLKCRGVKETSMPVYCTCAGDFALTIHTQVFMEQIGIFRNIAQHYGMSYL 2241

Query: 1978 QECTSWILE 1986
             E   W+L+
Sbjct: 2242 LETLEWLLQ 2250


>gi|425768381|gb|EKV06906.1| DNA polymerase epsilon catalytic subunit A [Penicillium digitatum
            Pd1]
 gi|425770341|gb|EKV08814.1| DNA polymerase epsilon catalytic subunit A [Penicillium digitatum
            PHI26]
          Length = 2228

 Score = 1384 bits (3582), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 718/1423 (50%), Positives = 944/1423 (66%), Gaps = 69/1423 (4%)

Query: 15   KKQKLIRSAEEELEAKLGYDLFSEGDKRLGWLLTFASSSLEDEDTRKVYSCIDLYFVSQD 74
            +K + IR A+  ++  LG+  F  GD R GWL+   S+S+ED D     + +D YF+  D
Sbjct: 43   EKFEAIRLADN-IDETLGFPRFESGDTRTGWLVNMHSTSIEDSDVPGGRAGVDYYFLQDD 101

Query: 75   GSTFKSKYKFRPYFYAATKEKMEMDVEAYLRRRYESQIADIEILEKEDLDLKNHLSGLHK 134
            G +FK+  ++ PYF  + K+  EM+ E + RR +E  I   + LEKEDLDL NHL G  K
Sbjct: 102  GGSFKATVEYDPYFLISVKKGYEMEAEEWCRRTFEGMIKKFKRLEKEDLDLPNHLLGYRK 161

Query: 135  SYLKISFDTVQQLMDVKKDLLHVVERNQAKFDAAEAYESILTGK-----------REQRP 183
            +Y+K+SF  V  L++V++ LL + E+N+    A +AY  + +              EQRP
Sbjct: 162  TYIKLSFANVSNLLEVRRTLLPLAEKNKKNESAMDAYVEMTSATAGIDLFDDEMINEQRP 221

Query: 184  QDFL---DCIVDLREYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLLEKRVDLLQRAEVH 240
               L   D IVD+REYDVPYH+R  ID D+R G+WY+V        L    D LQRA+  
Sbjct: 222  NGNLQASDFIVDIREYDVPYHVRVCIDKDIRIGKWYNVEADHGVISLTCLEDRLQRADPV 281

Query: 241  VCAFDIETTKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEG 300
            V AFDIE TKLPLKFPDA  D IMMISYM+DGQG+LI NRE V EDI D EYTPKPE+ G
Sbjct: 282  VLAFDIECTKLPLKFPDATTDQIMMISYMIDGQGFLITNREIVSEDIHDFEYTPKPEYNG 341

Query: 301  YFKVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQ 360
             F + N  NE  +L  +F H++  KP +  TYNGD+FDWPF+ETRA+  G  M  E+GF+
Sbjct: 342  PFIIFNEPNERGVLERFFEHVKISKPTVIATYNGDFFDWPFVETRASILGLDMYMEIGFR 401

Query: 361  CDKNQGECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAK 420
               N+   +A    H+DCFAWV RDSYLPQGS+GLKAVT AKLGYDP E++PE M  +A 
Sbjct: 402  -KNNEDIYQADNCVHMDCFAWVNRDSYLPQGSRGLKAVTVAKLGYDPDELDPELMTPYAS 460

Query: 421  EKPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQA 480
            E+PQ +A YSVSDAVATYYLYM YVHPFIFSL TIIP+S DE LRKG+GTLCEMLLMVQA
Sbjct: 461  ERPQTLAEYSVSDAVATYYLYMKYVHPFIFSLCTIIPLSADETLRKGTGTLCEMLLMVQA 520

Query: 481  YKANVICPNKHQSDPEKFYRNHLLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQL 540
            Y+  ++ PNKH++ PE FY  HLLESETY+GGHVE +E+GVFRSD+PT F +DP+A ++L
Sbjct: 521  YQHEIVLPNKHKNPPESFYEGHLLESETYVGGHVESIEAGVFRSDIPTHFSVDPTAIDEL 580

Query: 541  LNNLDRDLQYAIKVEGKMDLESVSNYDEVKNAIMEKLLRLQEEPIREECPLIYHLDVAAM 600
            L +LD  L+++I+VE K  ++ V NYD+V+  I+E+LL L+  P+R E P IYHLDVA+M
Sbjct: 581  LKDLDHALKFSIEVEEKKSMDDVVNYDDVRAQIVERLLDLKNNPVRNEVPFIYHLDVASM 640

Query: 601  YPNIILTNRLQPPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYYHLKKQI 660
            YPNI++TNRLQP S++ +  C ACDFNRPGKTC R++ W WRGE    KR +Y  +++  
Sbjct: 641  YPNIMITNRLQPDSLIDESSCAACDFNRPGKTCDRRMPWAWRGEFLPAKRDEYNMIRRAT 700

Query: 661  ESEFVDGTNGHLS-KSFLDLPKMEQQSRLKDRLKKYCQKAYKRVLDKPVTELREAGICMR 719
             +E   G     S +SF +L   EQ   +K RL+ Y +K Y ++ D    E REA IC R
Sbjct: 701  ANERFPGRYPKSSMRSFGELSIEEQAGVVKKRLQDYSKKIYHKIHDSKTME-REAIICQR 759

Query: 720  ENSFYVDTVRSFRDRRYEYKGLNKVWKGKLSEAKASGNS-IKIQEAQDMVVLYDSLQLAH 778
            EN FYVDTVR FRDRRY++KG  K WK K    ++SG S  +I+EA+ M++LYDSLQLAH
Sbjct: 760  ENPFYVDTVRDFRDRRYDFKGKQKSWKNKADGLQSSGGSAAEIEEAKKMIILYDSLQLAH 819

Query: 779  KCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVL 838
            K ILNSFYGYVMRKG+RWYSMEMAGV   TGA IIQ AR L+E+IG+PLELDTDGIWC+L
Sbjct: 820  KVILNSFYGYVMRKGSRWYSMEMAGVTCLTGAHIIQMARELVERIGRPLELDTDGIWCML 879

Query: 839  PGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSI 898
            PG FP+NF+F  K+  KKL+ISYPCVMLN  V    TN QYQ LVDP +  YETHSE SI
Sbjct: 880  PGGFPDNFSFTLKN-GKKLSISYPCVMLNHLVHAKYTNHQYQALVDPKTFKYETHSENSI 938

Query: 899  EFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAEL 958
             FEVDGPY+AMILP SKEE   +KKRYAVFN DG+LAELKGFE+KRRGELKLIK+FQ +L
Sbjct: 939  FFEVDGPYRAMILPTSKEEDKNLKKRYAVFNHDGSLAELKGFEVKRRGELKLIKIFQTQL 998

Query: 959  FDKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLADYGEQ 1018
            F  FL GS + E Y+AVA VA+RWLD+L   G  +AD ELID ISE+ +MSK+L +YG Q
Sbjct: 999  FKFFLEGSNLAETYAAVARVADRWLDVLYEHGTTLADEELIDLISENRSMSKTLEEYGSQ 1058

Query: 1019 KSCAVTTARRLSDFLGDTMVKDKGLRCQYIVACEPQGTPVSERAVPVAIFETDAEIMKFY 1078
            KS ++TTA+RL++FLG+ M+KDKGL C+YI++  P+ TPV+ERA+PVAIF  +  I +F+
Sbjct: 1059 KSTSITTAKRLAEFLGEQMIKDKGLNCKYIISSRPRNTPVTERAIPVAIFSAEENIKRFF 1118

Query: 1079 LRKWCKTS-SDVGIRSIVDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLYKK 1137
            LRKW K    D+  RS++DW+YY +RL S IQK+ITIPAA+QK+ NPVPRV HPDWL ++
Sbjct: 1119 LRKWLKEDPGDMDPRSVIDWNYYLERLGSVIQKLITIPAALQKLRNPVPRVAHPDWLQRR 1178

Query: 1138 VREKEDKFRQRKLVDIFSSLKKDDFLNKTCNAETNLMDENVEDLEDFPKKRRNSVNGPRP 1197
            +  K+D+F+Q+K+ D+F+  +K      + NA  N++D  V+   D  +    S      
Sbjct: 1179 INTKDDRFKQKKMTDLFTKSEKTPL--SSTNA--NILDHRVQHAGDLDEAIAGST----- 1229

Query: 1198 IVRCFEVNNEQKTVKTTDQVDSLRQQLEPSEVSDQQPSSQNAIDTENIDRIVDYKGWLEL 1257
                      QK     ++V   R+   P   S+       ++         +Y+G+L+ 
Sbjct: 1230 ----------QKMKSPNNKVSQKRKH--PGNASNTALDPFASLPAVMPSMSENYEGFLKY 1277

Query: 1258 KKRKWKDNLDR--RKKQKLGSLRASHQANGVSESLGDMINHKEAQRRTGVGSYFRRQETA 1315
            +K+KWK       R++Q  G      + N  S+SL +               +FR Q   
Sbjct: 1278 QKQKWKIQKQARIRRRQLFG-----ERTNVASDSLSN---------------FFRNQAQM 1317

Query: 1316 MTRCHWQIIQLVPSSQSGVFLAWVVVEGIMVRIPITVPRLFYLNSK-----DPIVEKFPG 1370
            +    W ++QL  +   GV  A+V+++  +  + + VPR F+LN K     D  V     
Sbjct: 1318 LYISTWNVLQLCDTGIPGVVRAFVLIDQKIHALSVRVPRQFFLNLKRDSLPDIDVPDCEV 1377

Query: 1371 RRVNKTLPHGRRSFNLIEVMIDEDQFRKESKKLAALLADPEVE 1413
             +V  TLP+G  S  L ++ + E++F +E+ K+  L   P VE
Sbjct: 1378 EKVTHTLPNGHPSVYLFKLSLSEEKFLEEADKMDILFQHPSVE 1420



 Score =  241 bits (615), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 177/627 (28%), Positives = 296/627 (47%), Gaps = 64/627 (10%)

Query: 1408 ADPEVEVLGWQQNAAKIGMQRCAASSQWFNERISLARYAHI------------------- 1448
            +D E+  LGWQ   A+  + R    S W      LAR+  +                   
Sbjct: 1616 SDMELPPLGWQAFVARRLVTRYLYLSSWIQHLTMLARFGDVPLCNLESEDPRYLIDISYA 1675

Query: 1449 ---------LWISDDGVPDLGGTSEEDECFA-DEVHQPVLTYPGAYRKVSVELKIHHLSV 1498
                     LW S    PD  G   +D   A D+V+ P +  PGAY  V +EL++ +LS+
Sbjct: 1676 RRLQQNNVVLWWSSGPRPDHAGYERDDILGALDKVNMPSVNVPGAYSTVCIELEVRNLSI 1735

Query: 1499 NALLKSNQVNEMEGGGLFGFDQDMNSGPYNNELCGFDETTSSAPAFRVVKQLIQRCLTDA 1558
            N +L S+ ++EM+G           SG   +    + E   ++    V++++++   T+A
Sbjct: 1736 NTILTSSIISEMDGSDTLL----APSGDGEDTGVFYSEKAFASAGVVVLREMVKHWWTEA 1791

Query: 1559 VTSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEFRKLGATIIFA 1618
              +GN  AD ++QHL RW+ SP S L+D  LH  +  + +K F  L+AEFR++G+ +IFA
Sbjct: 1792 C-AGNNMADIMVQHLIRWVESPVSCLYDRSLHNYVRLLSRKSFQRLMAEFRRVGSHVIFA 1850

Query: 1619 NFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLFMDQYNYGGIP 1678
            + +++++ T K ++  A AY   +LK+++    F +I+LE   +W  L++ D+YNYGG  
Sbjct: 1851 SPTRLLLQTTKTEVGNAYAYSQYVLKSIRANPSFHFIDLEIKEYWDYLVWYDEYNYGGKG 1910

Query: 1679 ARADESLDDDSQVDIVSSWNIAEYLPKEIQDHFVLVVSEFMYIPWKHAQKLAASRASLQE 1738
             R + +  D+  ++    W ++ +LP  +Q  F   + E  YI   H  K    R  LQ+
Sbjct: 1911 CR-EVTEADEQDLETAMHWQLSRFLPMPMQTIFHDWIVE--YIELMHGLK----RPELQD 1963

Query: 1739 GS-SCTPSITVA----AAENFESHIVQYVKGEISSYFTGKLLSIV---RDAIHHMKKMNN 1790
            G  S TP  T        E  +  I   +    S     ++  ++   RD + H +  ++
Sbjct: 1964 GELSSTPRPTQIPIGRTNEGDDDEITAILSDRFSKPLKKQISGLIRRQRDEMLHPELASD 2023

Query: 1791 DQHNS-PGVMQTAANIHKVDAPLEFIKHVCAAFALDQNVQHDVLVMRKNLLKYVRVREFA 1849
                  PGV+ +  +  K +  LE  K +    +L +    +  ++R+ LL    VREF+
Sbjct: 2024 YAFPVLPGVLVSPND--KRNPSLELTKLLMQVLSLSKTTTLESRLLRRELLALFEVREFS 2081

Query: 1850 PEAEFRDPCPSFILPNVICSYCNDCRDLDLCRDMALL----------AQDWHCAMPQCGQ 1899
             E  F +P  S  LP + C+ C   RDLDLCRD  +L           Q W C  P C  
Sbjct: 2082 KEGRFENPSASLKLPEMSCNSCCLIRDLDLCRDEDVLPDASSEASKSTQPWRC--PFCHA 2139

Query: 1900 PYDREVMENALLQIVRQRERLYHLQDLVCIRCNQVKAAHLAEQCACAGSFRCKEDASDFR 1959
             YDR   E  L+  V      +  QD+ C +CN ++ +   E C+C+G++    D  +  
Sbjct: 2140 EYDRLATEEFLIGQVHGLVVEWQTQDIKCSKCNSLQISDFIEHCSCSGTWTATVDRKEIE 2199

Query: 1960 SKMQIFLNIANRQGFQLLQECTSWILE 1986
            +K+++  ++A     QLL+     +LE
Sbjct: 2200 NKLRVLESVAKFHKLQLLEHIVEEVLE 2226


>gi|315054209|ref|XP_003176479.1| DNA polymerase epsilon catalytic subunit A [Arthroderma gypseum CBS
            118893]
 gi|311338325|gb|EFQ97527.1| DNA polymerase epsilon catalytic subunit A [Arthroderma gypseum CBS
            118893]
          Length = 2231

 Score = 1383 bits (3579), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 710/1418 (50%), Positives = 946/1418 (66%), Gaps = 82/1418 (5%)

Query: 25   EELEAKLGYDLFSEGDKRLGWLLTFASSSLEDEDTRKVYSCIDLYFVSQDGSTFKSKYKF 84
            +E++  +G+  +  G KR+GWL    S+++ED       + ++ YF+  +G +FK+  ++
Sbjct: 51   DEIDETMGFARYEAGKKRIGWLCNMHSTTIEDAKIPGGRAAVEFYFLEDNGGSFKAAVEY 110

Query: 85   RPYFYAATKEKMEMDVEAYLRRRYESQIADIEILEKEDLDLKNHLSGLHKSYLKISFDTV 144
             PYF  ATK   E +VE + +R +E  +  ++++EKEDL + NHL G  + +L++SF  V
Sbjct: 111  DPYFLVATKRGHEAEVEEWCKRSFEELVKGVKVVEKEDLQMPNHLLGYRRKFLQLSFANV 170

Query: 145  QQLMDVKKDLLHVVERNQAKFDAAEAYESILTGKR-------------EQRPQDFLDCIV 191
              L+ V+K +  +  +N+   +A + Y  + +                +   QD  D IV
Sbjct: 171  SDLLAVRKTIFPIAVKNRKNVNAMDTYAELASANAGFDLFDDASNSHGQNSLQDAADYIV 230

Query: 192  DLREYDVPYHIRFAIDNDVRCGQWYDV-SISSTGPL--LEKRVDLLQRAEVHVCAFDIET 248
            D+REYDVPYH+R +ID D+R G+WY V SI     L  LE+R   LQRA+  V A+DIET
Sbjct: 231  DIREYDVPYHVRVSIDKDIRIGKWYTVQSIHGVITLTCLEER---LQRADPIVLAYDIET 287

Query: 249  TKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNVN 308
            TKLPLKFPDA  D +MMISYM+DG+GYLI NRE V EDI D EYTPKPE+ G F + N  
Sbjct: 288  TKLPLKFPDAAIDQVMMISYMIDGRGYLITNREIVSEDINDFEYTPKPEYHGPFTIFNEP 347

Query: 309  NEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDKNQGEC 368
            +E  +L  +F+H++E KP + VTYNGD+FDWPF+E RA+  G  M  E+GF+  KN  + 
Sbjct: 348  DEKSVLERFFSHVKEAKPSVMVTYNGDFFDWPFVEARASVQGIDMYAEIGFR--KNSEDI 405

Query: 369  RAKFAC-HLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQMMA 427
                 C H+D F+WV RDSYLPQGS+GLKAVT AKLGYDP E++PE M R+A E+PQ +A
Sbjct: 406  YQSDHCVHMDAFSWVNRDSYLPQGSRGLKAVTVAKLGYDPDELDPELMTRYASERPQTLA 465

Query: 428  SYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVIC 487
             YSVSDAVATYYLYM YVHPFIFSL TIIP+SPDEVLRKG+GTLCEMLLMVQAY+ N++ 
Sbjct: 466  EYSVSDAVATYYLYMKYVHPFIFSLCTIIPLSPDEVLRKGTGTLCEMLLMVQAYQHNIVL 525

Query: 488  PNKHQSDPEKFYRNHLLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQLLNNLDRD 547
            PNKH    E FY  HLL+SETY+GGHVE +E+GVFRSD+P +F +D +A ++LL +LD  
Sbjct: 526  PNKHMDPNESFYEGHLLDSETYVGGHVESIEAGVFRSDIPVNFTVDTTAIDELLRDLDAA 585

Query: 548  LQYAIKVEGKMDLESVSNYDEVKNAIMEKLLRLQEEPIREECPLIYHLDVAAMYPNIILT 607
            L+++I VE K  +E V NY EVK  I E+LL L+  P R+E P IYHLDVA+MYPNI+ T
Sbjct: 586  LEFSITVEEKKSMEDVVNYSEVKAQITERLLNLKNSPNRKERPSIYHLDVASMYPNIMTT 645

Query: 608  NRLQPPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYYHLKKQIESE-FVD 666
            NRLQP S++ +  C ACDFNRPGKTC R+L W WRGE    KR +Y  +++ +E+E F  
Sbjct: 646  NRLQPDSMIKESDCAACDFNRPGKTCDRRLPWSWRGEFLPAKRDEYNMIRRAVENEKFPG 705

Query: 667  GTNGHLSKSFLDLPKMEQQSRLKDRLKKYCQKAYKRVLDKPVTELREAGICMRENSFYVD 726
             T  H  +SF  L + EQ + +K RL++Y +K Y ++ +    E REA IC REN FYVD
Sbjct: 706  KTKNHPPRSFESLDESEQATIVKKRLQEYSKKIYHKIRETRTIE-REAIICQRENPFYVD 764

Query: 727  TVRSFRDRRYEYKGLNKVWKGKLSEAKASGNS-IKIQEAQDMVVLYDSLQLAHKCILNSF 785
            TVR+FRDRRY++KG  KVWKGK+   K+SG +  +++EA+ MVVL+DSLQLAHK ILNSF
Sbjct: 765  TVRNFRDRRYDFKGKQKVWKGKVESLKSSGAANSEVEEAKKMVVLFDSLQLAHKVILNSF 824

Query: 786  YGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLPGSFPEN 845
            YGYVMRKG+RWYSMEMAGV   TGA IIQ AR L+E+IG+PLELDTDGIWC+LPG+FPEN
Sbjct: 825  YGYVMRKGSRWYSMEMAGVTCLTGAHIIQMARELVERIGRPLELDTDGIWCMLPGTFPEN 884

Query: 846  FTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEFEVDGP 905
            F FK  +  KKL ISYPCVMLN  V    TN QYQTL DP +  Y THS+ SI FEVDGP
Sbjct: 885  FVFKLVN-GKKLAISYPCVMLNHLVHGRFTNHQYQTLSDPSTFRYTTHSDNSIFFEVDGP 943

Query: 906  YKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFLHG 965
            Y+AMILP SKEE   +KKRYAVFN DG+LAELKGFE+KRRGELKLIKVFQ ++F  FL G
Sbjct: 944  YRAMILPTSKEEDKNLKKRYAVFNHDGSLAELKGFEVKRRGELKLIKVFQTQIFKFFLEG 1003

Query: 966  STIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLADYGEQKSCAVTT 1025
            +T+EE Y AVA VANRWLD+L   G  +AD ELID I E+ +MSK++ +YG QKS ++TT
Sbjct: 1004 TTLEETYGAVAEVANRWLDVLHMHGSTLADEELIDMICENRSMSKTIEEYGSQKSTSITT 1063

Query: 1026 ARRLSDFLGDTMVKDKGLRCQYIVACEPQGTPVSERAVPVAIFETDAEIMKFYLRKWCKT 1085
            A+RL++FLG+ M+KDKGL C+YI++  P+ +PV+ERAVPVAIF  +  I +F+LRKW K 
Sbjct: 1064 AKRLAEFLGEQMIKDKGLNCKYIISAAPRNSPVTERAVPVAIFSAEENIKRFFLRKWLKE 1123

Query: 1086 -SSDVGIRSIVDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLYKKVREKEDK 1144
               D+  R+I+DW YY +RL S IQK+ITIPAA+QKVSNPVPRV HP+WL +++  KED+
Sbjct: 1124 DPGDMDPRTIIDWDYYLERLGSVIQKLITIPAALQKVSNPVPRVAHPEWLQRRINTKEDR 1183

Query: 1145 FRQRKLVDIFSSLKKDDFLNKTCNAETNLMDENVE---DLEDFPKKRRNSVNGPRPIVRC 1201
            F+Q+K+ D+F+        N   N  TN+MD  V    D+ED  ++              
Sbjct: 1184 FKQKKMTDLFTK-------NPLANISTNIMDHRVPSAGDIEDMMQR-------------- 1222

Query: 1202 FEVNNEQKTVKTTDQVDSLRQQLEPSEVSDQQPSSQNAIDTENIDRIVDYKGWLELKKRK 1261
                  QK         + +++     V  Q P +       +I +  +Y+ WL  +K+K
Sbjct: 1223 ----GSQKPGTQIGNKLTQKRKAPGDTVISQDPYASLPPVMPSITK--NYEDWLRYQKQK 1276

Query: 1262 WKDNLDRRKKQKLGSLRASHQANGVSESLGDMINHKEAQRRTGVGSYFRRQETAMTRCHW 1321
            WK     R +++                   +   K+      +GS+FR Q        W
Sbjct: 1277 WKIQKQARLRRR------------------KLFGAKKTAASDSIGSFFRNQAELTYVNTW 1318

Query: 1322 QIIQLVPSSQSGVFLAWVVVEGIMVRIPITVPRLFYLNSKD---PIVEKFPG---RRVNK 1375
            QI+QL  +S  G   A+V+++  +  I I +PR  ++N KD   P V+   G   ++VN 
Sbjct: 1319 QILQLRETSSPGEVRAFVLIDRKVHTITIKIPRQIFINFKDVDLPDVD-ITGCSVQKVNH 1377

Query: 1376 TLPHGRRSFNLIEVMIDEDQFRKESKKLAALLADPEVE 1413
            TLP+G  S +L ++ + E+ + +E+ K++ LL  P VE
Sbjct: 1378 TLPNGHPSVHLFQLSMPEEIYLREASKISLLLNHPSVE 1415



 Score =  231 bits (589), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 175/696 (25%), Positives = 317/696 (45%), Gaps = 79/696 (11%)

Query: 1350 ITVPRLFYLNSKDPIVEKFPGRRVNKTL-----PHGRRSFNLIEVMIDEDQFRKESKKLA 1404
            +T  R  +L   D I++KF        +     P  R+   LI ++ D       S    
Sbjct: 1554 VTTKRKAHLEVGD-IIKKFRNETTMPMMVVVQSPKSRQLPRLISILKDYPMISLRSNA-- 1610

Query: 1405 ALLADPEVEVLGWQQNAAKIGMQRCAASSQWFNERISLARYAHI---------------- 1448
               +D E+  LGWQ  AA+  +    A   W N  +  ARY ++                
Sbjct: 1611 ---SDNELPPLGWQSYAARQIVVHYLALDSWVNHLLGFARYGNVPIGNLEKDDPKHLIDI 1667

Query: 1449 ------------LWISDDGVPDLGGTSEEDECFA--DEVHQPVLTYPGAYRKVSVELKIH 1494
                        LW S   +PD GG  E+D      + V    +   GAY  V +EL++ 
Sbjct: 1668 LYARQLEQSNVVLWWSASPLPDHGGY-EKDNILGPLNSVEMASVNIAGAYSTVCIELEVR 1726

Query: 1495 HLSVNALLKSNQVNEMEGGGLFGFDQDMNSGPYNNELCG------FDETTSSAPAFRVVK 1548
            +L++N +L S+ +N++E       +    + P + E         + +T  SA    V++
Sbjct: 1727 NLAINTVLTSSLINDLENNEPALLNP---TAPGDQEKISDGTGVLYSDTAFSAVGILVLR 1783

Query: 1549 QLIQRCLTDAVTSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEF 1608
            ++++    +A   GN  AD ++QHL RW+ S    L+D  LH+ +  +++K    L+  F
Sbjct: 1784 EMVKSWWNEAC-KGNGMADVMVQHLIRWVESADCCLYDHALHQYMQMILKKALQQLILAF 1842

Query: 1609 RKLGATIIFANFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLF 1668
            +++G+ +I+AN +++I+ T K ++  A AY   +L++++ + LF +++++   +W  L++
Sbjct: 1843 KRVGSNVIYANPNRLILQTTKTEVGNAYAYSKYILQSIKEKPLFHFLDIDIKEYWDYLIW 1902

Query: 1669 MDQYNYGGIPARADESLDDDSQ-VDIVSSWNIAEYLPKEIQDHFVLVVSEFMYIPWKHAQ 1727
             DQ+NYGG      E ++ D Q ++ + +W I+ +LP  +Q  FV  + E++ I   H  
Sbjct: 1903 YDQFNYGG--KACQEVVEADKQELEAIMNWQISRFLPTPLQSVFVDWIVEYVEI--MHGL 1958

Query: 1728 KLAASRASLQEGSSCTPSITVAAAENFES-HIVQYVKGEISSYFTGKLLSIVR----DAI 1782
            K   +     +G+     +     +  ES  I   +    S     ++  ++R    + +
Sbjct: 1959 KKPVTVNGETDGTPRQTQLPFRPEDESESVEITSVLSQSFSKALKKQVAGLIRRQRDEML 2018

Query: 1783 HHMKKMNNDQHNSPGVMQTAANIHKVDAPLEFIKHVCAAFALDQNVQHDVLVMRKNLLKY 1842
            H     + D    PG +      H+ +  LE +K++     L +    +V ++R++LL  
Sbjct: 2019 HPELASDYDFPVLPGAVPPK---HERNPTLELVKYLMQVLGLSKYTTLEVRLLRRDLLAL 2075

Query: 1843 VRVREFAPEAEFRDPCPSFILPNVICSYCNDCRDLDLCRDMALLAQD------------W 1890
              +REF+ E +F  P  S +L  +IC  C   RDLDLCRD  LL +             W
Sbjct: 2076 FDIREFSDEGKFESPSSSLVLSQIICHNCTMARDLDLCRDPELLPESGTENNASTTLPPW 2135

Query: 1891 HCAMPQCGQPYDREVMENALLQIVRQRERLYHLQDLVCIRCNQVKAAHLAEQCACAGSFR 1950
             C  P C   YDR  +E  ++  V+     +  QDL C +C  +      E C+C+G + 
Sbjct: 2136 TC--PYCSTEYDRLFIEERIIGEVQGLVMEWQAQDLKCAKCAGIMINPFMEHCSCSGEWA 2193

Query: 1951 CKEDASDFRSKMQIFLNIANRQGFQLLQECTSWILE 1986
               D      +++++ +IA+  GF++L   T  +LE
Sbjct: 2194 ETIDRRATEKRLRVYKSIADYYGFKMLSMVTKGVLE 2229


>gi|70999892|ref|XP_754663.1| DNA polymerase epsilon, catalytic subunit A/POL2 [Aspergillus
            fumigatus Af293]
 gi|74674212|sp|Q4WXH8.1|DPOE_ASPFU RecName: Full=DNA polymerase epsilon catalytic subunit A; AltName:
            Full=DNA polymerase II subunit A
 gi|66852300|gb|EAL92625.1| DNA polymerase epsilon, catalytic subunit A/POL2, putative
            [Aspergillus fumigatus Af293]
 gi|159127677|gb|EDP52792.1| DNA polymerase epsilon, catalytic subunit A/POL2, putative
            [Aspergillus fumigatus A1163]
          Length = 2230

 Score = 1383 bits (3579), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 725/1433 (50%), Positives = 960/1433 (66%), Gaps = 88/1433 (6%)

Query: 15   KKQKLIRSAEEELEAKLGYDLFSEGDKRLGWLLTFASSSLEDEDTRKVYSCIDLYFVSQD 74
            +K + IR A    EA LG+  F  G+KR+GWL+   S+S+ED +     + +D YF+   
Sbjct: 43   EKFEAIRLANSIDEA-LGFPRFESGEKRVGWLINMHSTSIEDPNVPGGRAGVDYYFLEDG 101

Query: 75   GSTFKSKYKFRPYFYAATKEKMEMDVEAYLRRRYESQIADIEILEKEDLDLKNHLSGLHK 134
            G +FK+  ++ PYF  A K+  E +VE + RR +E  I  I+ +EKEDL L NHL G  +
Sbjct: 102  GGSFKATVEYDPYFLLAVKKGHEAEVEEWCRRMFEGLIKTIKRVEKEDLQLPNHLLGHRR 161

Query: 135  SYLKISFDTVQQLMDVKKDLLHVVERNQAKFDAAEAYESILTGK-----------REQRP 183
            ++L+++F  V  L+DV+K LL + E+N+   +  + Y  I +              E RP
Sbjct: 162  TFLQLNFANVSHLLDVRKTLLPLAEKNKKNVNVMDTYAEISSANAGFDLFDDELINESRP 221

Query: 184  QDFL---DCIVDLREYDVPYHIRFAIDNDVRCGQWYDVS-----ISSTGPLLEKRVDLLQ 235
               +   D I+D+REYDVPYH+R AID D+R G+WY V      IS T   LE+R   LQ
Sbjct: 222  NSNMNASDYIIDIREYDVPYHVRVAIDKDIRIGKWYTVEAKHGVISLT--CLEER---LQ 276

Query: 236  RAEVHVCAFDIETTKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPK 295
            RA+  + AFDIETTKLPLKFPD+  D IMMISYM+DGQG+LI NRE V EDI D EYTPK
Sbjct: 277  RADPVILAFDIETTKLPLKFPDSVIDQIMMISYMIDGQGFLITNREIVSEDIRDFEYTPK 336

Query: 296  PEFEGYFKVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSE 355
            PE+ G F + N  NE  ++  +F H++E KP +  TYNGD+FDWPF+E RA+  G  M +
Sbjct: 337  PEYSGPFMIFNEPNERSVIERFFEHIKEAKPTVIATYNGDFFDWPFVEARASVLGIDMYK 396

Query: 356  ELGFQCDKNQGECRAKFAC-HLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPED 414
            E+GF+  KN  +      C H+DCFAWV RDSYLPQGS+GLKAVT AKLGYDP E++PE 
Sbjct: 397  EIGFR--KNSEDIYQSDHCVHMDCFAWVNRDSYLPQGSRGLKAVTVAKLGYDPDELDPEL 454

Query: 415  MVRFAKEKPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEM 474
            M  +A E+PQ +A YSVSDAVATYYLYM YVHPFIFSL TIIP++PD+ LRKG+GTLCEM
Sbjct: 455  MTPYASERPQTLAEYSVSDAVATYYLYMKYVHPFIFSLCTIIPLNPDDTLRKGTGTLCEM 514

Query: 475  LLMVQAYKANVICPNKHQSDPEKFYRNHLLESETYIGGHVECLESGVFRSDLPTSFKLDP 534
            LLMVQAYK  ++ PNKH+  PE FY  HLLESETY+GGHVE +E+GVFRSD+P +F +D 
Sbjct: 515  LLMVQAYKGEIVLPNKHKDPPESFYEGHLLESETYVGGHVESIEAGVFRSDIPVTFNIDT 574

Query: 535  SAYEQLLNNLDRDLQYAIKVEGKMDLESVSNYDEVKNAIMEKLLRLQEEPIREECPLIYH 594
            +A ++LL +LD  L+++I+VE K  ++ V NY++VK  I E+L+ L+E+P R+E P IYH
Sbjct: 575  TAIDELLRDLDAALKFSIEVEEKKSMDDVVNYEDVKAQIAERLVNLREKPHRDEVPSIYH 634

Query: 595  LDVAAMYPNIILTNRLQPPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYY 654
            LDVA+MYPNI++TNRLQP S++ +  C ACDFNRPGKTC R+L W WRGE    KR +Y 
Sbjct: 635  LDVASMYPNIMITNRLQPDSMIQESDCAACDFNRPGKTCDRRLPWAWRGEFLPAKRDEYN 694

Query: 655  HLKKQIESEFVDG-TNGHLSKSFLDLPKMEQQSRLKDRLKKYCQKAYKRVLDKPVTELRE 713
             +++ + +E   G T     +SF ++   EQ + +K RL+ Y +K Y ++ D   T +RE
Sbjct: 695  MIRQAVANELFPGRTKNSPMRSFGEMSAEEQAAIIKKRLQDYSKKIYHKIHDSK-TIVRE 753

Query: 714  AGICMRENSFYVDTVRSFRDRRYEYKGLNKVWKGKLS-EAKASGNSIKIQEAQDMVVLYD 772
            A IC REN FYVDTVRSFRDRRY++KG  KVWKGK      A  ++ +I+EA+ M+VL+D
Sbjct: 754  AIICQRENPFYVDTVRSFRDRRYDFKGKQKVWKGKTEALKAAGASAAEIEEAKKMIVLFD 813

Query: 773  SLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTD 832
            SLQLAHK ILNSFYGYVMRKG+RWYSMEMAGV   TGA IIQ AR L+E+IG+PLELDTD
Sbjct: 814  SLQLAHKVILNSFYGYVMRKGSRWYSMEMAGVTCLTGAHIIQMARELVERIGRPLELDTD 873

Query: 833  GIWCVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYET 892
            GIWC+LPGSFPE+F+F  K+  KKL ISYPCVMLN  V    TN QYQTLVDP +  YET
Sbjct: 874  GIWCMLPGSFPEDFSFTLKN-GKKLGISYPCVMLNHLVHGKYTNHQYQTLVDPKTFRYET 932

Query: 893  HSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIK 952
            HS+ SI FEVDGPYKAMILP SKEE   +KKRYAVFN DG+LAELKGFE+KRRGELKLIK
Sbjct: 933  HSDNSIFFEVDGPYKAMILPTSKEEDKNLKKRYAVFNHDGSLAELKGFEVKRRGELKLIK 992

Query: 953  VFQAELFDKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSL 1012
            +FQ ++F  FL GST+EE Y+AVA VA+RWLD+L + G  +AD ELI+ ISE+ +M+K+L
Sbjct: 993  IFQTQIFRFFLEGSTLEETYAAVARVADRWLDVLYDHGATLADEELIELISENRSMTKTL 1052

Query: 1013 ADYGEQKSCAVTTARRLSDFLGDTMVKDKGLRCQYIVACEPQGTPVSERAVPVAIFETDA 1072
             +YG QKS ++TTARRL++FLG+ MVKDKGL C+YI++ +P+ TPV+ERA+PV IF  + 
Sbjct: 1053 EEYGNQKSTSITTARRLAEFLGEQMVKDKGLNCKYIISAKPKNTPVTERAIPVTIFSAEE 1112

Query: 1073 EIMKFYLRKWCKTS-SDVGIRSIVDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHP 1131
             + +F+LRKW K    D+  RS++DW YY +RL S +QK+ITIPAA+QKV NPVPRV HP
Sbjct: 1113 PVKRFFLRKWLKDDPGDMDPRSVIDWDYYLERLGSVVQKLITIPAALQKVRNPVPRVAHP 1172

Query: 1132 DWLYKKVREKEDKFRQRKLVDIFSSLKKDDFLNKTCNAETNLMDENVEDLEDFPKKRRNS 1191
            DWL +++  KEDKF+Q K+ D+F   +K    N   N  TN++D  V+   D  +   NS
Sbjct: 1173 DWLQRRINMKEDKFKQTKMTDMFGKTEK----NPLSNISTNILDHRVQHHGDIGEAVANS 1228

Query: 1192 V----NGPRPIVRCFEVNNEQKTVKTTDQVDSLRQQLEPSEVSDQQPSSQNAIDTENIDR 1247
                 + P   +     + E  T    D   SL             P+   +++      
Sbjct: 1229 TQKLKSSPNGKISQKRKHPEGLTKTLLDPFASL-------------PAIMPSLND----- 1270

Query: 1248 IVDYKGWLELKKRKWKDNLD--RRKKQKLGSLRASHQANGVSESLGDMINHKEAQRRTGV 1305
              DY G+L+ +K+KWK       R++Q  G      + N  ++SL ++            
Sbjct: 1271 --DYVGFLKYQKQKWKIQKQARARRRQLFG-----ERVNVATDSLSNL------------ 1311

Query: 1306 GSYFRRQETAMTRCHWQIIQLVPSSQSGVFLAWVVVEGIMVRIPITVPRLFYLNSK---- 1361
               FR Q   +    WQI+QL  + + G+  A+V+++  +  + I VPR  Y+N K    
Sbjct: 1312 ---FRNQAELLYINTWQILQLCETGRPGLVRAFVLIDRKIHALTIKVPRQIYVNLKRDSL 1368

Query: 1362 -DPIVEKFPGRRVNKTLPHGRRSFNLIEVMIDEDQFRKESKKLAALLADPEVE 1413
             D  V      +VN TLP+G  S +L ++ + ED + +E+ K+ ALL  P +E
Sbjct: 1369 PDVDVPDCEVEKVNHTLPNGHPSVHLFKLTLSEDTYLRETDKIDALLQHPSIE 1421



 Score =  246 bits (628), Expect = 9e-62,   Method: Compositional matrix adjust.
 Identities = 176/632 (27%), Positives = 289/632 (45%), Gaps = 71/632 (11%)

Query: 1407 LADPEVEVLGWQQNAAKIGMQRCAASSQWFNERISLARYAHI------------------ 1448
            ++D ++  LGWQ   AK  +      + W +    LARY  +                  
Sbjct: 1616 VSDMDLPPLGWQSFIAKRLVTHYLYLASWIHHLTMLARYGDVPLCNLENDDPRYLIDISY 1675

Query: 1449 ----------LWISDDGVPDLGGTSEEDECFADE-VHQPVLTYPGAYRKVSVELKIHHLS 1497
                      LW S+   PD  G  ++D   + E V  P +  P AY  V +EL++ +LS
Sbjct: 1676 ARRLQQNNVVLWWSNGPRPDHAGYEKDDVTGSLERVSMPSVNVPSAYNTVCIELEVRNLS 1735

Query: 1498 VNALLKSNQVNEMEGGGLFGFDQDMNSGPYNNELCGFDETTSSAPAFRVVKQLIQRCLTD 1557
            +N +L S+ +NE+EG           S   N     + E   ++    V++++++   ++
Sbjct: 1736 INTILTSSIINELEGADTL-LASSEPSADANGSGVLYSEKAFASAGAVVLREMVKHWWSE 1794

Query: 1558 AVTSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEFRKLGATIIF 1617
            A   GN  AD ++QHL RW+ SP S L+D  LH  +  + +K F  L+AEFR++G+ +IF
Sbjct: 1795 AC-EGNNMADIMVQHLIRWVESPVSCLYDRSLHDYVRMLSRKSFQRLMAEFRRVGSNVIF 1853

Query: 1618 ANFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLFMDQYNYGGI 1677
            A+ +++++ T K ++  A AY   +LK+++    F +I+LE   +W  L++ D+YNYGG 
Sbjct: 1854 ASPTRLLLQTTKTEVGNAYAYSQYVLKSIRANASFHFIDLEIKEYWDYLVWYDEYNYGGK 1913

Query: 1678 PARADESLDDDSQVDIVSSWNIAEYLPKEIQDHFVLVVSEFMYIPWKHAQKLAASRASLQ 1737
              R      +D +++ V  W ++ +LP  +Q  F   V E  YI   H  K   S     
Sbjct: 1914 GCRKVTG-SEDQELETVMHWQLSRFLPAPMQTIFHDWVVE--YIELMHGLKRTDS----- 1965

Query: 1738 EGSSCTPSITVAAAENFESHIVQYVKGEISSYFTGKLLSIVRDAIHHMKKMNNDQ--HNS 1795
               S TP +T     N           EI+S    K    ++  I  + +   D+  H  
Sbjct: 1966 -DDSSTPRLTQLPVGNHNED-----NDEITSILAEKFSKPLKKQISGLIRRQRDELLHPE 2019

Query: 1796 ----------PGVMQTAANIHKVDAPLEFIKHVCAAFALDQNVQHDVLVMRKNLLKYVRV 1845
                      PGV+    N  K +  LE +K +    +L +    +  ++R+ LL    V
Sbjct: 2020 LASDYVFPVLPGVLVDPNN-DKRNPVLELVKLLMQVLSLSKTTTLETRLLRRELLAMFEV 2078

Query: 1846 REFAPEAEFRDPCPSFILPNVICSYCNDCRDLDLCRDMALLAQ-----------DWHCAM 1894
            REF+ E  F +P  S  LP + C+ C   RDLDLCRD  +L +            W C  
Sbjct: 2079 REFSKEGRFENPGASLKLPELSCNACCLIRDLDLCRDEDVLPEMGSDPNKAAPKPWRC-- 2136

Query: 1895 PQCGQPYDREVMENALLQIVRQRERLYHLQDLVCIRCNQVKAAHLAEQCACAGSFRCKED 1954
            P C   YDR   E AL+  V+     +  QDL C +C  +K +   E C+C+G +    D
Sbjct: 2137 PFCQTEYDRLAQEEALIGQVQGLIVGWQTQDLKCSKCGGLKISDFMEHCSCSGHWVETMD 2196

Query: 1955 ASDFRSKMQIFLNIANRQGFQLLQECTSWILE 1986
             ++   K+ +  +++   G +LL+     +LE
Sbjct: 2197 RNEVEKKLLLLSSVSKFHGLKLLESVVQGVLE 2228


>gi|302661866|ref|XP_003022594.1| hypothetical protein TRV_03251 [Trichophyton verrucosum HKI 0517]
 gi|291186550|gb|EFE41976.1| hypothetical protein TRV_03251 [Trichophyton verrucosum HKI 0517]
          Length = 2231

 Score = 1381 bits (3574), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 709/1416 (50%), Positives = 947/1416 (66%), Gaps = 82/1416 (5%)

Query: 27   LEAKLGYDLFSEGDKRLGWLLTFASSSLEDEDTRKVYSCIDLYFVSQDGSTFKSKYKFRP 86
            ++  +G+  +  G KR+GWL    S+++ED       + ++ YF+ ++G +FK+  ++ P
Sbjct: 53   IDETMGFARYEAGKKRIGWLCNMHSTTIEDPKVPGGRAAVEFYFLEENGGSFKAAVEYDP 112

Query: 87   YFYAATKEKMEMDVEAYLRRRYESQIADIEILEKEDLDLKNHLSGLHKSYLKISFDTVQQ 146
            YF  ATK   E +VE + +R +E  +  ++++EKEDL + NHL G  + +L++SF  V  
Sbjct: 113  YFLIATKRGHEAEVEEWCKRTFEELLKGVKVVEKEDLKMPNHLLGYKRKFLQLSFANVSD 172

Query: 147  LMDVKKDLLHVVERNQAKFDAAEAYESILTG-------------KREQRPQDFLDCIVDL 193
            L+ V+K +  +  +N+   +A + Y  + +              + +   QD  D IVD+
Sbjct: 173  LLAVRKTVFPIAVKNRKNVNAMDTYAELASANAGFDLFDDESNNRGQNSLQDAADYIVDI 232

Query: 194  REYDVPYHIRFAIDNDVRCGQWYDV-SISS--TGPLLEKRVDLLQRAEVHVCAFDIETTK 250
            REYDVPYH+R +ID D+R G+WY V SI    T   LE+R   LQRA+  V A+DIETTK
Sbjct: 233  REYDVPYHVRVSIDKDIRIGKWYTVQSIHGLITLTCLEER---LQRADPVVLAYDIETTK 289

Query: 251  LPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNVNNE 310
            LPLKFPDA  D +MMISYM+DG+GYLI NRE V EDI D EYTPKPE+ G F + N  +E
Sbjct: 290  LPLKFPDAAIDQVMMISYMIDGRGYLITNREIVSEDINDFEYTPKPEYPGPFTIFNEPDE 349

Query: 311  IELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDKNQGEC-R 369
              +L  +F+H++E KP + VTYNGD+FDWPF+E RA+  G  M  E+GF+  KN  +  +
Sbjct: 350  KAVLERFFSHIKEAKPSVMVTYNGDFFDWPFVEARASVQGIDMYAEIGFR--KNSEDIYQ 407

Query: 370  AKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQMMASY 429
            + +  H+D F+WV RDSYLPQGS+GLKAVT AKLGYDP E++PE M R+A E+PQ +A Y
Sbjct: 408  SDYCAHMDAFSWVNRDSYLPQGSRGLKAVTVAKLGYDPDELDPELMTRYASERPQTLAEY 467

Query: 430  SVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVICPN 489
            SVSDAVATYYLYM YVHPFIFSL TIIP++PDEVLRKG+GTLCEMLLMVQAY+ N+I PN
Sbjct: 468  SVSDAVATYYLYMKYVHPFIFSLCTIIPLNPDEVLRKGTGTLCEMLLMVQAYQHNIILPN 527

Query: 490  KHQSDPEKFYRNHLLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQLLNNLDRDLQ 549
            KH    E FY  HLL+SETY+GGHVE +E+GVFRSD+P +F ++  A ++LL +LD  L+
Sbjct: 528  KHTDPNESFYEGHLLDSETYVGGHVESIEAGVFRSDIPVNFTVETGAIDELLRDLDAALE 587

Query: 550  YAIKVEGKMDLESVSNYDEVKNAIMEKLLRLQEEPIREECPLIYHLDVAAMYPNIILTNR 609
            ++I VE K  +E V NY EVK  I E+LL L+  P R E P IYHLDVA+MYPNI+ TNR
Sbjct: 588  FSITVEEKKSMEDVVNYSEVKAQITERLLNLKNCPNRNERPSIYHLDVASMYPNIMTTNR 647

Query: 610  LQPPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYYHLKKQIESE-FVDGT 668
            LQP S++ +  C ACDFNRPGKTC R+L W WRGE    KR +Y  +++ +E+E F   T
Sbjct: 648  LQPDSMIKESDCAACDFNRPGKTCDRRLPWSWRGEFLPAKRDEYNMIRRAVENEKFPGKT 707

Query: 669  NGHLSKSFLDLPKMEQQSRLKDRLKKYCQKAYKRVLDKPVTELREAGICMRENSFYVDTV 728
              H  +SF  L + EQ + +K RL++Y +K Y ++ +    E REA IC REN FYVDTV
Sbjct: 708  KNHPPRSFESLDESEQATIVKKRLQEYSKKIYHKIRETRTIE-REAIICQRENPFYVDTV 766

Query: 729  RSFRDRRYEYKGLNKVWKGKLSEAKASGNS-IKIQEAQDMVVLYDSLQLAHKCILNSFYG 787
            R+FRDRRY++KG  KVWKGK+   K+SG +  +I+EA+ MVVL+DSLQLAHK ILNSFYG
Sbjct: 767  RNFRDRRYDFKGKQKVWKGKVESLKSSGAANSEIEEAKKMVVLFDSLQLAHKVILNSFYG 826

Query: 788  YVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLPGSFPENFT 847
            YVMRKG+RWYSMEMAGV   TGA IIQ AR L+E+IG+PLELDTDGIWC+LPG+FPENF 
Sbjct: 827  YVMRKGSRWYSMEMAGVTCLTGAHIIQMARELVERIGRPLELDTDGIWCMLPGTFPENFV 886

Query: 848  FKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEFEVDGPYK 907
            FK  +  KKL ISYPCVMLN  V    TN QYQTL DP +  Y THS+ SI FEVDGPY+
Sbjct: 887  FKLVN-GKKLAISYPCVMLNHLVHGRFTNHQYQTLSDPSTFKYTTHSDNSIFFEVDGPYR 945

Query: 908  AMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFLHGST 967
            AMILP SKEE   +KKRYAVFN DG+LAELKGFE+KRRGELKLIKVFQ ++F  FL GST
Sbjct: 946  AMILPTSKEEDKNLKKRYAVFNHDGSLAELKGFEVKRRGELKLIKVFQTQIFKFFLEGST 1005

Query: 968  IEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLADYGEQKSCAVTTAR 1027
            +EE Y AVA VANRWLD+LD  G  +AD ELID I E+ +MSK++ +YG QKS ++TTA+
Sbjct: 1006 LEETYGAVAEVANRWLDVLDMHGSTLADEELIDMICENRSMSKTIEEYGGQKSTSITTAK 1065

Query: 1028 RLSDFLGDTMVKDKGLRCQYIVACEPQGTPVSERAVPVAIFETDAEIMKFYLRKWCKT-S 1086
            RL++FLG+ M+KDKGL C+YI++  P+ +P++ERAVPVAIF  +  I +F+LRKW K   
Sbjct: 1066 RLAEFLGEQMIKDKGLNCKYIISAAPRNSPITERAVPVAIFSAEENIKRFFLRKWLKEDP 1125

Query: 1087 SDVGIRSIVDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLYKKVREKEDKFR 1146
             D+  R+I+DW YY +RL S IQK+ITIPAA+QK+SNPVPRV HPDWL +++  KED+F+
Sbjct: 1126 GDMDPRTIIDWDYYLERLGSVIQKLITIPAALQKISNPVPRVAHPDWLQRRINTKEDRFK 1185

Query: 1147 QRKLVDIFSSLKKDDFLNKTCNAETNLMDENVE---DLEDFPKKRRNSVNGPRPIVRCFE 1203
            Q+K+ D+F+        N   N  TN+MD  +    D+ED  ++R               
Sbjct: 1186 QKKMTDLFTK-------NPLANISTNIMDHRIPSTGDIEDMMQRR--------------- 1223

Query: 1204 VNNEQKTVKTTDQVDSLRQQLEPSEVSDQQPSSQNAIDTENIDRIVDYKGWLELKKRKWK 1263
                QK           +++      + Q P +       +ID+  +Y+ WL  +K+KWK
Sbjct: 1224 ---SQKPGTQLGNKLIQKRKAPGDNTTSQDPFASLPPVMPSIDK--NYEDWLRYQKQKWK 1278

Query: 1264 DNLDRRKKQKLGSLRASHQANGVSESLGDMINHKEAQRRTGVGSYFRRQETAMTRCHWQI 1323
                 R +++                   +   K+       GS+FR Q        WQI
Sbjct: 1279 IQKQARLRRR------------------KLFGAKKTAASDSTGSFFRNQAELTYVNTWQI 1320

Query: 1324 IQLVPSSQSGVFLAWVVVEGIMVRIPITVPRLFYLNSKD---PIVEKFPG---RRVNKTL 1377
            +QL  +S  G   A+V+++  +  I I +PR  ++N KD   P V+   G   ++VN TL
Sbjct: 1321 LQLRETSSPGEVRAFVLIDRKVHTITIKIPRQIFINFKDVDLPDVD-ITGCSVQKVNHTL 1379

Query: 1378 PHGRRSFNLIEVMIDEDQFRKESKKLAALLADPEVE 1413
            P+G  S +L ++ + E+ + +E+ K++ LL  P VE
Sbjct: 1380 PNGHPSVHLFQLSMPEETYLREASKISLLLNHPSVE 1415



 Score =  229 bits (585), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 164/634 (25%), Positives = 295/634 (46%), Gaps = 70/634 (11%)

Query: 1408 ADPEVEVLGWQQNAAKIGMQRCAASSQWFNERISLARYAHI------------------- 1448
            +D E+  LGWQ  AA+  +    A   W N  +  ARY ++                   
Sbjct: 1611 SDNELPPLGWQPYAARQIVVHYLALDSWINHLLGFARYGNVPIGNLEKDDPKHLIDILYA 1670

Query: 1449 ---------LWISDDGVPDLGGTSEEDECFA--DEVHQPVLTYPGAYRKVSVELKIHHLS 1497
                     LW S   +PD GG  E+D      + V    +   GAY  V +EL++ +L+
Sbjct: 1671 RQLEQNNAVLWWSASPLPDHGGY-EKDNILGPLNSVEMTSVNIAGAYSTVCIELEVRNLA 1729

Query: 1498 VNALLKSNQVNEMEGG--GLF-----GFDQDMNSGPYNNELCGFDETTSSAPAFRVVKQL 1550
            +N +L S+ ++++E     L      G  Q ++ G        + +T  SA    V++ +
Sbjct: 1730 INTVLTSSLISDLENNEPALLNPTAPGGQQTISDG----SGVLYSDTAFSAAGILVLRDM 1785

Query: 1551 IQRCLTDAVTSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEFRK 1610
            ++    +A   GN  AD ++QHL RW+ S    L+D  LH+ +  +++K    L+  F++
Sbjct: 1786 VKSWWNEAC-KGNGMADVMVQHLIRWVDSADCCLYDHALHQYMQMILKKALQQLIMAFKR 1844

Query: 1611 LGATIIFANFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLFMD 1670
            +G+ +I+AN +++I+ T K ++  A AY   +L++++ + LF +++++   +W  L++ D
Sbjct: 1845 VGSNVIYANPNRLILQTTKAEVGNAYAYSKYILQSIKEKPLFHFLDIDIKEYWDYLIWYD 1904

Query: 1671 QYNYGGIPARADESLDDDSQ-VDIVSSWNIAEYLPKEIQDHFVLVVSEFMYIPWKHAQKL 1729
            Q+NYGG      E ++ D Q ++ + +W I  +LP  +Q  FV  + E  Y+   H  K 
Sbjct: 1905 QFNYGG--KACQEVVEADKQELEAIMNWQICRFLPTPLQSVFVDWIVE--YVELMHGLKK 1960

Query: 1730 AASRASLQEGSSCTPSITVAAAENFES-HIVQYVKGEISSYFTGKLLSIVR----DAIHH 1784
             A+ +   +G+     +     +  ES  I   +    S     ++  ++R    + +H 
Sbjct: 1961 PATVSGGADGTPRQTQLPFRPEDESESVEITSVLSQSFSKALKKQVAGLIRRQRDEMLHP 2020

Query: 1785 MKKMNNDQHNSPGVMQTAANIHKVDAPLEFIKHVCAAFALDQNVQHDVLVMRKNLLKYVR 1844
                + D    PG M      H+ +  L  +K++     L +    +V ++R++LL    
Sbjct: 2021 ELASDYDFPVLPGAMSPK---HERNPTLVLVKYLMQVLGLSKYTALEVRLLRRDLLALFD 2077

Query: 1845 VREFAPEAEFRDPCPSFILPNVICSYCNDCRDLDLCRDMALLAQD------------WHC 1892
            +REF+ E +F  P  S +L  +IC  C   RDLDLCRD  LL +             W C
Sbjct: 2078 IREFSDEGKFESPSSSLVLSQIICHNCTMARDLDLCRDPELLPESGTENKVSTTLPPWTC 2137

Query: 1893 AMPQCGQPYDREVMENALLQIVRQRERLYHLQDLVCIRCNQVKAAHLAEQCACAGSFRCK 1952
              P C   YDR  +E  ++  V+     +  QDL C +C  +      E C+C+G +   
Sbjct: 2138 --PYCSTEYDRLFLEERIIGEVQGLVMEWQAQDLKCAKCAGIMINPFMEHCSCSGEWVET 2195

Query: 1953 EDASDFRSKMQIFLNIANRQGFQLLQECTSWILE 1986
             D      +++++ +IA+  GF++L   T  +LE
Sbjct: 2196 IDRRATEKRLRVYKSIADFYGFKMLSMVTKGVLE 2229


>gi|350633564|gb|EHA21929.1| hypothetical protein ASPNIDRAFT_53636 [Aspergillus niger ATCC 1015]
          Length = 2224

 Score = 1380 bits (3572), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 705/1405 (50%), Positives = 951/1405 (67%), Gaps = 61/1405 (4%)

Query: 27   LEAKLGYDLFSEGDKRLGWLLTFASSSLEDEDTRKVYSCIDLYFVSQDGSTFKSKYKFRP 86
            ++  LG+  F  G+KR+GWL+   S+S+ED +     + +D YF+   G +FK+  ++ P
Sbjct: 54   IDESLGFPRFESGEKRVGWLINMHSTSIEDPNVPGGRAGVDYYFLEDGGGSFKATVEYDP 113

Query: 87   YFYAATKEKMEMDVEAYLRRRYESQIADIEILEKEDLDLKNHLSGLHKSYLKISFDTVQQ 146
            YF  A K+  E +VE + RR +E  I  +  +EKEDL L NHL G  +++L+++F +V  
Sbjct: 114  YFLIAVKKGRETEVEDWCRRTFEGLIKKVLRVEKEDLKLPNHLLGYKRTFLQLNFASVSH 173

Query: 147  LMDVKKDLLHVVERNQAKFDAAEAY-----ESILTGKREQRPQDFLDCIVDLREYDVPYH 201
            L++V+K LL + E+N+    +A A      + ++   R     +  D I+D+REYDVPYH
Sbjct: 174  LLEVRKTLLPLAEKNKKNVYSANAGFDLFDDELINESRSNATMNASDFIIDIREYDVPYH 233

Query: 202  IRFAIDNDVRCGQWYDVSISSTGPLLEKRVDLLQRAEVHVCAFDIETTKLPLKFPDADYD 261
            +R +ID D+R G+WY V        L    + L RA+  V AFDIETTKLPLKFPD+  D
Sbjct: 234  VRVSIDKDIRIGKWYTVEAKHGVISLTCIEERLTRADPVVLAFDIETTKLPLKFPDSVID 293

Query: 262  IIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNVNNEIELLRLWFAHM 321
             IMMISYM+DGQG+LI NRE V EDI D EYTPKPE+ G F + N  +E  +L  +F H+
Sbjct: 294  QIMMISYMIDGQGFLITNREIVSEDINDFEYTPKPEYSGPFMIFNEPDERGVLERFFEHI 353

Query: 322  QEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDKNQGECRAKFAC-HLDCFA 380
            +E KP +  TYNGD+FDWPF+E RA+  G  M  E+GF+  KN  +      C H+DCFA
Sbjct: 354  KEAKPTVIATYNGDFFDWPFVEARASVLGIDMYREIGFR--KNSEDIYQSDHCVHMDCFA 411

Query: 381  WVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQMMASYSVSDAVATYYL 440
            WV RDSYLPQGS+GLKAVT AKLGYDP E++PE M  +A E+PQ +A YSVSDAVATYYL
Sbjct: 412  WVNRDSYLPQGSRGLKAVTVAKLGYDPDELDPELMTPYASERPQTLAEYSVSDAVATYYL 471

Query: 441  YMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVICPNKHQSDPEKFYR 500
            YM YVHPFIFSL TI+P++PD+ LRKG+GTLCEMLLMVQAY+ N++ PNKH+  PE FY 
Sbjct: 472  YMKYVHPFIFSLCTILPINPDDTLRKGTGTLCEMLLMVQAYQGNIVLPNKHKDPPESFYE 531

Query: 501  NHLLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQLLNNLDRDLQYAIKVEGKMDL 560
             HLLESETY+GGHVE +E+GVFRSD+P +F + P+A ++LL +LD  L+++I+VE K  +
Sbjct: 532  GHLLESETYVGGHVESIEAGVFRSDIPVTFNVQPAAIDELLRDLDAALKFSIEVEEKKSM 591

Query: 561  ESVSNYDEVKNAIMEKLLRLQEEPIREECPLIYHLDVAAMYPNIILTNRLQPPSIVTDEV 620
            + V+NY+EVK  I +KL+ L+E P R+E P IYHLDVA+MYPNI++TNRLQP S++ +  
Sbjct: 592  DDVTNYEEVKKQIADKLIDLKERPHRDEVPFIYHLDVASMYPNIMITNRLQPDSMIQESN 651

Query: 621  CTACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYYHLKKQIESEFVDGTNGHLS-KSFLDL 679
            C ACDFNRPGKTC R+L W WRGE    KR +Y  +++ + +E   G + +   +SF D+
Sbjct: 652  CAACDFNRPGKTCDRRLPWAWRGEFLPAKRDEYNMIRQAVANERFPGKHKNSPMRSFGDM 711

Query: 680  PKMEQQSRLKDRLKKYCQKAYKRVLDKPVTELREAGICMRENSFYVDTVRSFRDRRYEYK 739
               EQ   +K RL+ Y +K Y ++ D   T +REA IC REN FYVDTVRSFRDRRY++K
Sbjct: 712  SIEEQAGIIKKRLQDYSKKIYHKIHDSK-TMVREAIICQRENPFYVDTVRSFRDRRYDFK 770

Query: 740  GLNKVWKGKLSEAKASGNS-IKIQEAQDMVVLYDSLQLAHKCILNSFYGYVMRKGARWYS 798
            G  KVWKGK    K+SG S  +++EA+ M+VLYDSLQLAHK ILNSFYGYVMRKG+RWYS
Sbjct: 771  GKQKVWKGKTDALKSSGASAAEVEEAKKMIVLYDSLQLAHKVILNSFYGYVMRKGSRWYS 830

Query: 799  MEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLPGSFPENFTFKTKDLKKKLT 858
            MEMAGV   TGA+IIQ AR L+E+IG+PLELDTDGIWC+LPGSFPENF+F  K+  KKL 
Sbjct: 831  MEMAGVTCLTGARIIQMARELVERIGRPLELDTDGIWCMLPGSFPENFSFTLKN-GKKLG 889

Query: 859  ISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEFEVDGPYKAMILPASKEEG 918
            ISYPCVMLN  V  + TN QYQTLVD  +  YE +SE SI FEVDGPYKAMILP SKEE 
Sbjct: 890  ISYPCVMLNHLVHGSYTNHQYQTLVDQATFRYEQNSENSIFFEVDGPYKAMILPTSKEED 949

Query: 919  ILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFLHGSTIEECYSAVAAV 978
              +KKRYAVFN DG+LAELKGFE+KRRGELKLIK+FQ ++F  FL G+T+ E Y+AVA V
Sbjct: 950  KNLKKRYAVFNHDGSLAELKGFEVKRRGELKLIKIFQTQIFRFFLEGTTLTETYAAVAKV 1009

Query: 979  ANRWLDLLDNQGKDIADSELIDYISESSTMSKSLADYGEQKSCAVTTARRLSDFLGDTMV 1038
            A+RWLD+L   G  +AD ELID ISE+ +M+K+L +YG QKS ++TTARRL++FLG+ MV
Sbjct: 1010 ADRWLDVLYEHGATLADEELIDLISENRSMTKTLEEYGNQKSTSITTARRLAEFLGEQMV 1069

Query: 1039 KDKGLRCQYIVACEPQGTPVSERAVPVAIFETDAEIMKFYLRKWCKTS-SDVGIRSIVDW 1097
            KDKGL C+YI++ +P+ TPV+ERA+PVAIF  +  + +F+LRKW K    D+  R+++DW
Sbjct: 1070 KDKGLNCKYIISSKPRNTPVTERAIPVAIFSAEENVKRFFLRKWLKDDPGDMDPRTVIDW 1129

Query: 1098 SYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLYKKVREKEDKFRQRKLVDIFSSL 1157
             YY +RL S +QK+ITIPAA+QK+ NPVPRV HPDWL +++  K+D+F+Q K+ D+F   
Sbjct: 1130 DYYLERLGSVVQKLITIPAALQKIRNPVPRVAHPDWLQRRINTKDDRFKQTKMTDMFIKS 1189

Query: 1158 KKDDFLNKTCNAETNLMDENVEDLEDFPKKRRNSVNGPRPIVRCFEVNNEQKTVKTTDQV 1217
             K +  N   +  TN++D  V+   D  +   NS    +P       ++E K  +     
Sbjct: 1190 DKPE-KNPLTDISTNILDHRVQHTGDLDEAIANSTQKLKP-------SSETKVSQKRKHP 1241

Query: 1218 DSL-RQQLEP-SEVSDQQPSSQNAIDTENIDRIVDYKGWLELKKRKWKDNLDR--RKKQK 1273
            + L +  L+P + +  Q PS  +           DY G+L+ +K+KWK       R++Q 
Sbjct: 1242 EGLSKTSLDPFATLPAQMPSMAD-----------DYVGFLKYQKQKWKIQKQARIRRRQL 1290

Query: 1274 LGSLRASHQANGVSESLGDMINHKEAQRRTGVGSYFRRQETAMTRCHWQIIQLVPSSQSG 1333
             G      +AN   +SL ++               FR Q   +    WQI+QL  + + G
Sbjct: 1291 FG-----ERANAGGDSLSNL---------------FRNQAELLYINTWQILQLSETGRPG 1330

Query: 1334 VFLAWVVVEGIMVRIPITVPRLFYLNSK-----DPIVEKFPGRRVNKTLPHGRRSFNLIE 1388
            +  A+V+++  +  + + VPR  Y+N K     D  V      +V  TLP+G  S +L +
Sbjct: 1331 IVRAFVLIDRKIHALTVKVPRQIYVNLKQDSLPDVDVPDCEVEKVTHTLPNGHPSVHLFK 1390

Query: 1389 VMIDEDQFRKESKKLAALLADPEVE 1413
            + + E+ + +E++K+  L   P VE
Sbjct: 1391 LTLSEETYLREAEKIDVLFQHPSVE 1415



 Score =  236 bits (602), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 177/630 (28%), Positives = 293/630 (46%), Gaps = 69/630 (10%)

Query: 1407 LADPEVEVLGWQQNAAKIGMQRCAASSQWFNERISLARYAHI------------------ 1448
            ++D ++  LGWQ   A+  +      S W      LARY  +                  
Sbjct: 1610 VSDMDLPPLGWQSFIARRLVTHYLYLSAWVQHLTLLARYGDVPLCNLENDDPRFLIDISY 1669

Query: 1449 ----------LWISDDGVPDLGGTSEED-ECFADEVHQPVLTYPGAYRKVSVELKIHHLS 1497
                      LW S +  PD  G  ++D     ++V  P +  P AY  V +EL++ +L+
Sbjct: 1670 ARRLQQNNVVLWWSSNPRPDHAGYEKDDISGPLEKVSMPSVNVPSAYTTVCIELEVRNLA 1729

Query: 1498 VNALLKSNQVNEMEGGGLFGFDQDMNSGPYNNELCGFDETTSSAPAFRVVKQLIQRCLTD 1557
            +N +L S+ +NEMEG          ++ P    +   ++  +SA A  V++++++   T+
Sbjct: 1730 INTILTSSIINEMEGADTLLASSGQSADPNGGGVLYSEKAFASAGAV-VLREMVKHWWTE 1788

Query: 1558 AVTSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEFRKLGATIIF 1617
            A   GN  AD ++QHL RW+ SP S L+D  LH  +  + +K F  L+AEFR++G+ +IF
Sbjct: 1789 AC-DGNSMADIMVQHLIRWVESPVSCLYDRSLHHYVRMLSRKSFQRLMAEFRRVGSNVIF 1847

Query: 1618 ANFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLFMDQYNYGGI 1677
            A+ +++++ T K ++  A AY   +LK+++    F +I+LE   +W  LL+ D+YNYGG 
Sbjct: 1848 ASSTRLLLQTSKTEVGNAYAYSQYVLKSIRANPSFHFIDLEIKEYWDYLLWYDEYNYGG- 1906

Query: 1678 PARADESLDDDSQ-VDIVSSWNIAEYLPKEIQDHFVLVVSEFMYIPWKHAQKLAASRAS- 1735
                 E ++ D Q ++ V  W +   LP  +Q  F   V E  YI   H  K   +  S 
Sbjct: 1907 -KGCQEVVESDEQELETVMHWQLNRTLPTPMQTIFHDWVVE--YIELMHGLKRPDTNDST 1963

Query: 1736 --LQEGSSCTPS------ITVAAAENFESHIVQYVKGEISSYFTGKLLSIVRDAIHHMKK 1787
              L +     PS      ++ A AE F   + + + G         L+   RD + H + 
Sbjct: 1964 PRLTQIPIGRPSDEDSQEVSAALAEKFSKPLKKQITG---------LIRRQRDELLHPEL 2014

Query: 1788 MNNDQHNS-PGVMQTAANIHKVDAPLEFIKHVCAAFALDQNVQHDVLVMRKNLLKYVRVR 1846
             ++      PGV+ +  N  K +  LE +K +    +L +    +  ++R+ LL    VR
Sbjct: 2015 ASDYIFPVLPGVL-SDPNEEKRNPVLELVKLLMQVLSLSKITTMETRLLRRELLALFEVR 2073

Query: 1847 EFAPEAEFRDPCPSFILPNVICSYCNDCRDLDLCRDMALL-----------AQDWHCAMP 1895
            EF+ E  F +P  S  +P + C  C   RDLDLCRD  +L            + W C  P
Sbjct: 2074 EFSKEGRFENPGASLKIPELTCGSCCLIRDLDLCRDEDVLPEPGIDASKTSTKPWRC--P 2131

Query: 1896 QCGQPYDREVMENALLQIVRQRERLYHLQDLVCIRCNQVKAAHLAEQCACAGSFRCKEDA 1955
             C   YDR   E  L+  ++     +  QDL C +C  +K +   E C+C+G +    D 
Sbjct: 2132 FCQTEYDRLAQEEILIGQIQGYIVGWQTQDLKCSKCGTLKVSDFMEHCSCSGVWVETMDR 2191

Query: 1956 SDFRSKMQIFLNIANRQGFQLLQECTSWIL 1985
             +   K+ I  ++A   G +LL+     +L
Sbjct: 2192 KEIERKLHILNSVAKFHGLKLLESVVGEVL 2221


>gi|451855388|gb|EMD68680.1| hypothetical protein COCSADRAFT_134693 [Cochliobolus sativus ND90Pr]
          Length = 2235

 Score = 1380 bits (3572), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 700/1416 (49%), Positives = 937/1416 (66%), Gaps = 77/1416 (5%)

Query: 27   LEAKLGYDLFSEGDKRLGWLLTFASSSLEDEDTRKVYSCIDLYFVSQDGSTFKSKYKFRP 86
            ++  +G+  F  G KR+GWL+   S+++EDED     + +D YF+ ++G TFK+  ++ P
Sbjct: 55   IDETMGFARFDSGKKRVGWLVNMHSTTVEDEDVPGGRAGVDFYFIGEEGDTFKATLEYDP 114

Query: 87   YFYAATKEKMEMDVEAYLRRRYESQIADIEILEKEDLDLKNHLSGLHKSYLKISFDTVQQ 146
            YF  A K+  E DVE Y +R YE  +  ++I+EKEDL + NHL+G  + +L ++F  V  
Sbjct: 115  YFLLAVKKGREQDVEEYCKRAYEGLVKTVKIIEKEDLSMPNHLTGYRRKFLMLTFANVND 174

Query: 147  LMDVKKDLLHVVERNQAKFDAAEAYESILTG---------------KREQRPQDFLDCIV 191
            L+ V+K +  +VE+N+   +A + Y  +  G               KR     D  D IV
Sbjct: 175  LLAVRKGVAPIVEKNKKNINAMDTYAEVANGNANFDFFDNEDYEYEKRLTTTVDASDFIV 234

Query: 192  DLREYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLLEKRVDLLQRAEVHVCAFDIETTKL 251
            D+REYDVPYH+R AID DVR G WY V        +    D L  A+  V A+DIETTKL
Sbjct: 235  DIREYDVPYHVRVAIDKDVRIGNWYTVEAKHGVVSMTCVEDRLTPADPVVMAYDIETTKL 294

Query: 252  PLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNVNNEI 311
            PLKFPDA  D IMMISYM+DGQG+LI NRE V EDI+D EYTPKPE+ G F + N  +E 
Sbjct: 295  PLKFPDAAIDQIMMISYMIDGQGFLITNREIVSEDIQDFEYTPKPEYHGPFMIFNEPDEK 354

Query: 312  ELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDKNQGEC-RA 370
             LL  +F H++  KP + VTYNGD+FDWPF+E RA+  G  M +E+GF+  KN  +  ++
Sbjct: 355  ALLERFFEHIKIAKPTVMVTYNGDFFDWPFVEARASVQGIDMYQEIGFR--KNSEDIYQS 412

Query: 371  KFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQMMASYS 430
             +  H+D FAWV RDSYLPQGS+GLKAVT AKLGYDP E++PE M  +A E+PQ +A YS
Sbjct: 413  DYCAHMDAFAWVSRDSYLPQGSRGLKAVTMAKLGYDPDELDPELMTPYAAERPQTLAEYS 472

Query: 431  VSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVICPNK 490
            VSDAVATYYLYM YVHPFIF+L  I+P+ PD+ LRKG+GTLCEMLLMVQAY+  ++ PNK
Sbjct: 473  VSDAVATYYLYMKYVHPFIFALCKILPLGPDDALRKGTGTLCEMLLMVQAYQKGIVLPNK 532

Query: 491  HQSDPEKFYRNHLLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQLLNNLDRDLQY 550
            HQ+  E F+  HLLESETY+GGHVE LE+GVFRSD+  +F +DP+A ++L+ +LD  L++
Sbjct: 533  HQAPKEAFWNGHLLESETYVGGHVEALEAGVFRSDIAYNFAVDPTAIDELVGDLDAALKF 592

Query: 551  AIKVEGKMDLESVSNYDEVKNAIMEKLLRLQEEPIREECPLIYHLDVAAMYPNIILTNRL 610
            +I+VE K  +E V+NYDEV+  I++KL++L+  P R E PLIYHLDVA+MYPNI+ T RL
Sbjct: 593  SIEVEEKKKMEDVTNYDEVRAEIVDKLMQLKNTPNRSERPLIYHLDVASMYPNIMTTYRL 652

Query: 611  QPPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYYHLKKQIESEFVDGTNG 670
            QP S++ +  C ACDFNRPGKTC R++ W WRGE    KR +Y  ++  +E+E   G   
Sbjct: 653  QPDSMINESNCAACDFNRPGKTCDRRMPWAWRGEYLPAKRDEYNMVRNALENEQFPGRFP 712

Query: 671  HLSK-SFLDLPKMEQQSRLKDRLKKYCQKAYKRVLDKPVTELREAGICMRENSFYVDTVR 729
            +  K SF +L + EQ + ++ RL  Y +K Y +V D    E REA IC REN FYVDTV 
Sbjct: 713  NSPKRSFQELSEDEQAALVRKRLTDYSKKIYHKVHDATTIE-REAIICQRENPFYVDTVS 771

Query: 730  SFRDRRYEYKGLNKVWKGKLS-EAKASGNSIKIQEAQDMVVLYDSLQLAHKCILNSFYGY 788
             FRDRRY++KG  KVWKGK      A   + +I++A+ M+VL+DS+QLAHK ILNSFYGY
Sbjct: 772  GFRDRRYDFKGKQKVWKGKTEALKAAGAPAAEIEDAKKMIVLFDSMQLAHKVILNSFYGY 831

Query: 789  VMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLPGSFPENFTF 848
            VMRKG+RWYS+EMAGV   TGA+IIQ AR L+E+IG+PLELDTDGIW +LP +FPENF+F
Sbjct: 832  VMRKGSRWYSLEMAGVTCLTGARIIQLARSLVERIGRPLELDTDGIWAILPATFPENFSF 891

Query: 849  KTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEFEVDGPYKA 908
            K  +  KKLTISYPC MLN  V    TN QY+TLVDPV+  YE HS+ SI FEVDGPYKA
Sbjct: 892  KLSN-GKKLTISYPCTMLNHLVHAQYTNHQYETLVDPVNFRYEKHSDNSIFFEVDGPYKA 950

Query: 909  MILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFLHGSTI 968
            MILP SKEE   +KKRYAVFN DG+LAELKGFE+KRRGELKLIK FQ ++F  FL G+T+
Sbjct: 951  MILPTSKEEDKNLKKRYAVFNHDGSLAELKGFEVKRRGELKLIKNFQGQIFKFFLEGTTL 1010

Query: 969  EECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLADYGEQKSCAVTTARR 1028
            EE Y AVA VANRWLD+LD +G  +AD ELID I E+  M+K+L +YG QKS A+TTA+R
Sbjct: 1011 EETYGAVARVANRWLDILDTRGATLADEELIDLIVENKNMTKTLEEYGSQKSTAITTAKR 1070

Query: 1029 LSDFLGDTMVKDKGLRCQYIVACEPQGTPVSERAVPVAIFETDAEIMKFYLRKWCKTS-S 1087
            L++FLG+ MVKDKGL C+YI++  P+  PV+ERAVP++IF  +  + +++LRKW +    
Sbjct: 1071 LAEFLGEQMVKDKGLNCKYIISKTPRNAPVTERAVPLSIFSAEESVKRYFLRKWLRDDPG 1130

Query: 1088 DVGIRSIVDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLYKKVREKEDKFRQ 1147
            ++ IRS++DW YY++RL+S IQK+ITIPAA QKV NPVPRV HPDWL +++R+KEDK +Q
Sbjct: 1131 EMDIRSVLDWDYYRERLASVIQKLITIPAAYQKVRNPVPRVPHPDWLDRRIRQKEDKMQQ 1190

Query: 1148 RKLVDIFSSLKKDDFLNKTCNAETNLMDENVE-DLEDFPKKRRNSVNGPRPIVRCFEVNN 1206
             K+ D+FS            N + N+ +  V  DLEDF   +                N 
Sbjct: 1191 TKMTDMFSK-------KVLTNGDANVANNKVTGDLEDFGSAKLTQ-------------NQ 1230

Query: 1207 EQKTVKTTDQVDSLRQQLEPSEVSDQQPSSQNAIDTENIDRIVDYKGWLELKKRKWKDNL 1266
             Q       ++ + R++ EP+ V    P +       +ID   DY GWL  +K+KWK   
Sbjct: 1231 SQMKKGIVTKMVAKRKEPEPA-VPIVDPYAALPKVVPSIDE--DYSGWLVYQKQKWKIQR 1287

Query: 1267 DRRKKQKLGSLRASHQANGVSESLGDMINHKEAQRRTGVGSYFRRQETAMTRCHWQIIQL 1326
            + RK+++                   +   K       +GS+FR Q  ++    WQ++QL
Sbjct: 1288 EARKRRR------------------QLFGEKAVDASDAIGSFFRNQAQSLYISTWQLVQL 1329

Query: 1327 VPSSQSGVFLAWVVVEGIMVRIPITVPRLFYLNSKDPIVEKFPG---------RRVNKTL 1377
             P+   G   A+V+++  +  + I VPR  YLN +    E+ P          + VN TL
Sbjct: 1330 RPTETPGEVRAFVLIDKKIHALKIIVPRQLYLNLRS---EELPDVSISGCSVEKVVNHTL 1386

Query: 1378 PHGRRSFNLIEVMIDEDQFRKESKKLAALLADPEVE 1413
            P+G  S +L ++ + E+ +  E+  ++AL     VE
Sbjct: 1387 PNGHPSIHLFKLQMSEETYVHEADGISALFNHSSVE 1422



 Score =  251 bits (641), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 171/631 (27%), Positives = 307/631 (48%), Gaps = 71/631 (11%)

Query: 1408 ADPEVEVLGWQQNAAKIGMQRCAASSQWFNERISLARYAHI------------------- 1448
            +D ++  LGWQ   AK  +        W    + LARY  I                   
Sbjct: 1618 SDKQLPPLGWQSFIAKRLVGHYLDLGSWVAHLLELARYGDIPLCNLESNDPRFLIDVAYA 1677

Query: 1449 ---------LWISDDGVPDLGGTSEEDECFADE-VHQPVLTYPGAYRKVSVELKIHHLSV 1498
                     LW S    PD  G  ++D     E V  P +  PG Y  V +++ + +L++
Sbjct: 1678 RRLQKDRVILWWSGQAKPDHAGYEKDDVLGPLETVEMPSINNPGTYSSVCIDINLRNLAI 1737

Query: 1499 NALLKSNQVNEMEGGGLFGFDQDMNSGPYNNELCG--FDETTSSAPAFRVVKQLIQRCLT 1556
            N +L S+ +NE+EG     F+    S    N+     + +   ++    V++++++    
Sbjct: 1738 NTILSSSLINELEGADSVSFNPAAPSYDSANDGSNVIYSDNAFASAGITVLREMVKAWWV 1797

Query: 1557 DAVTSGNVF--ADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEFRKLGAT 1614
            +AV +G+ F  AD ++QHL RW+ SP S L+D  LH  +  + +K    L+ +F+++G+ 
Sbjct: 1798 EAVQAGHGFSMADVMVQHLVRWVSSPGSFLYDRSLHYYVQMMSKKTLQQLMTDFKRVGSH 1857

Query: 1615 IIFANFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLFMDQYNY 1674
            I+FA+ +++++ T K ++  A AY   ++K ++ + LF+++ELE   FW  L++ D++NY
Sbjct: 1858 IVFASPNRLLLQTTKAEIGNAYAYSQYIIKTIKAKPLFQFMELEIKEFWDYLVWYDEFNY 1917

Query: 1675 GGIPARADESLDDDSQ-VDIVSSWNIAEYLPKEIQDHFVLVVSEFMYIPWKHAQKLAASR 1733
            GG     D+  +D+ Q V+ +  W +A++LP++ Q  F   V EF  I   H++K     
Sbjct: 1918 GG--KGCDKVTEDEVQPVENIMCWQLAQFLPQKFQPAFNDWVIEF--IELMHSRKRP--- 1970

Query: 1734 ASLQEGSSCTPS------ITVAAAENFESHIVQYVK--GEISSYFTGKLLSIVRDAIHHM 1785
            A  ++GS+  P+      +TV   E  +     + K   +  + F  K  + V D +   
Sbjct: 1971 AITEDGSTPRPTQIPLRPLTVDPNEQTQILPKTFTKPLSKQMNAFAKKQHAEVLDPLFAS 2030

Query: 1786 KKMNNDQHNSPGVMQTAANIHKVDAPLEFIKHVCAAFALDQNVQHDVLVMRKNLLKYVRV 1845
            + +  +    PG     +++   +  L+ +K +    +LD+ +  +   +RK LL    +
Sbjct: 2031 EYVFPEL---PG-----SHLKLTNPVLQLVKSIMQVLSLDRAISLEARALRKELLNLFDI 2082

Query: 1846 REFAPEAEFRDPCPSFILPNVICSYCNDCRDLDLCRDMALLA-----QDWHCAMPQ---- 1896
            REF+ EA F +P  + ++  VIC  C   RDLDLCRD +LL       D    MP+    
Sbjct: 2083 REFSAEATFTNPSAALVVRGVICDDCTSSRDLDLCRDSSLLPVILPDSDAAPVMPKWKCD 2142

Query: 1897 -CGQPYDREVMENALLQIVRQRERLYHLQDLVCIRCNQVKAAHLAEQCACAGSFRCKEDA 1955
             C  PYD+  +E  L+  V++    +  QDL C +C ++++    E CACAG +   ++ 
Sbjct: 2143 NCDSPYDKRCIEEQLVGEVQKMVLEWCTQDLKCAKCKRLRSNEFMEHCACAGEWAPTKNK 2202

Query: 1956 SDFRSKMQIFLNIANRQGFQLL----QECTS 1982
            ++ + KM ++ N+A      +L    +EC S
Sbjct: 2203 TEIKKKMGVYGNVARFYTLGMLEAVVEECLS 2233


>gi|67525219|ref|XP_660671.1| hypothetical protein AN3067.2 [Aspergillus nidulans FGSC A4]
 gi|85542061|sp|O93845.2|DPOE_EMENI RecName: Full=DNA polymerase epsilon catalytic subunit A; AltName:
            Full=DNA polymerase II subunit A
 gi|40744462|gb|EAA63638.1| conserved hypothetical protein [Aspergillus nidulans FGSC A4]
 gi|259485986|tpe|CBF83469.1| TPA: DNA polymerase epsilon catalytic subunit A (DNA polymerase II
            subunit A)(EC 2.7.7.7)
            [Source:UniProtKB/Swiss-Prot;Acc:O93845] [Aspergillus
            nidulans FGSC A4]
          Length = 2207

 Score = 1380 bits (3571), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 701/1397 (50%), Positives = 945/1397 (67%), Gaps = 66/1397 (4%)

Query: 27   LEAKLGYDLFSEGDKRLGWLLTFASSSLEDEDTRKVYSCIDLYFVSQDGSTFKSKYKFRP 86
            ++  LG+  F  G+KR+GWL+   S+S+ED +     + +D YF+  DG +FK+  ++ P
Sbjct: 54   IDESLGFPRFEAGEKRVGWLINMHSTSIEDPNVPGGRAGVDYYFLDDDGGSFKATVEYDP 113

Query: 87   YFYAATKEKMEMDVEAYLRRRYESQIADIEILEKEDLDLKNHLSGLHKSYLKISFDTVQQ 146
            YF  A K   E +VE + RR +E  I  I+ + KEDL L NHL G  +++L++ F  V  
Sbjct: 114  YFLIAVKTGHEAEVEEWCRRMFEGLIKKIKRVVKEDLKLPNHLLGHRRTFLQLDFANVSH 173

Query: 147  LMDVKKDLLHVVERNQAKFDAAEAYESILTGKREQRPQDFLDCIVDLREYDVPYHIRFAI 206
            L++V+K LL + E+N+                R     +  D I+D+REYDVPYH+R AI
Sbjct: 174  LLEVRKTLLPLAEKNRK-------------NARPNGTTNASDFIIDIREYDVPYHVRVAI 220

Query: 207  DNDVRCGQWYDVSISSTGPLLEKRVDLLQRAEVHVCAFDIETTKLPLKFPDADYDIIMMI 266
            D D+R G+WY V  +     L    + L RA+  V AFDIETTKLPLKFPD+  D IMMI
Sbjct: 221  DKDIRIGKWYTVEATHGIISLTCLEERLTRADPVVLAFDIETTKLPLKFPDSVIDQIMMI 280

Query: 267  SYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNVNNEIELLRLWFAHMQEVKP 326
            SYM+DGQG+LI NRE V EDI+D EYTPKPE+ G F + N  NE  ++  +F H++E KP
Sbjct: 281  SYMIDGQGFLITNREIVSEDIDDFEYTPKPEYSGPFMIFNEPNERAVIERFFEHIKEAKP 340

Query: 327  GIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDKNQGECRAKFAC-HLDCFAWVKRD 385
             +  TYNGD+FDWPF+E RA+  G  M +E+GF+  KN  +      C H+DCFAWV RD
Sbjct: 341  TVIATYNGDFFDWPFVEARASVLGIDMYKEIGFR--KNSEDIYQSDHCAHMDCFAWVNRD 398

Query: 386  SYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQMMASYSVSDAVATYYLYMTYV 445
            SYLPQGS+GLKAVT AKLGYDP E++PE M  +A E+PQ +A YSVSDAVATYYLYM Y+
Sbjct: 399  SYLPQGSRGLKAVTVAKLGYDPDELDPELMTPYASERPQTLAEYSVSDAVATYYLYMKYI 458

Query: 446  HPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVICPNKHQSDPEKFYRNHLLE 505
            HPFIFSL TI+P++PD+ LRKG+GTLCEMLLMVQAYK N++ PNKH+  PE FY  HLLE
Sbjct: 459  HPFIFSLCTILPLNPDDTLRKGTGTLCEMLLMVQAYKGNIVLPNKHKDPPEAFYEGHLLE 518

Query: 506  SETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQLLNNLDRDLQYAIKVEGKMDLESVSN 565
            SETY+GGHVE +E+GVFRSD+P  F +DP+A ++LL +LD  L+++I+VE K  L+ V+N
Sbjct: 519  SETYVGGHVESIEAGVFRSDIPVPFNIDPTAVDELLRDLDAALKFSIEVEEKKSLDDVTN 578

Query: 566  YDEVKNAIMEKLLRLQEEPIREECPLIYHLDVAAMYPNIILTNRLQPPSIVTDEVCTACD 625
            Y+EVK  I + L  L+E P R E P IYHLDVA+MYPNI++TNRLQP S++ +  C ACD
Sbjct: 579  YEEVKGQIAKLLTDLRENPHRNEVPFIYHLDVASMYPNIMITNRLQPDSLIQESNCAACD 638

Query: 626  FNRPGKTCLRKLEWVWRGEIFMGKRSDYYHLKKQIESEFVDG-TNGHLSKSFLDLPKMEQ 684
            FNRPGKTC R+L W WRGE    KR +Y  +++ +++E   G T     ++F +L   EQ
Sbjct: 639  FNRPGKTCDRRLPWAWRGEFLPAKRDEYNMIRQAVQNERFPGRTKKSPMRAFTELSAEEQ 698

Query: 685  QSRLKDRLKKYCQKAYKRVLDKPVTELREAGICMRENSFYVDTVRSFRDRRYEYKGLNKV 744
             + +K RL+ Y +K Y ++ D   T +REA IC REN FYVDTVRSFRDRRY++KG  KV
Sbjct: 699  AAIVKKRLQDYSKKIYHKIHDSK-TMVREAIICQRENPFYVDTVRSFRDRRYDFKGKQKV 757

Query: 745  WKGKLSEAKASGN-SIKIQEAQDMVVLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAG 803
            WKGK    K+SG  + +I+EA+ M+VLYDSLQLAHK ILNSFYGYVMRKG+RWYSMEMAG
Sbjct: 758  WKGKTESLKSSGAPAAEIEEAKKMIVLYDSLQLAHKVILNSFYGYVMRKGSRWYSMEMAG 817

Query: 804  VVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLPGSFPENFTFKTKDLKKKLTISYPC 863
            V   TGA+IIQ AR L+E+IG+PLELDTDGIWC+LPG+FPENF+F  K+  KKL ISYPC
Sbjct: 818  VTCLTGARIIQMARELVERIGRPLELDTDGIWCMLPGTFPENFSFTLKN-GKKLGISYPC 876

Query: 864  VMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEFEVDGPYKAMILPASKEEGILIKK 923
            VMLN  V  + TN QYQ+L +P +  YETHSE SI FEVDGPY+AMILP SKEE   +KK
Sbjct: 877  VMLNHLVHGSYTNHQYQSLANPATFRYETHSENSIFFEVDGPYRAMILPTSKEEDKNLKK 936

Query: 924  RYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFLHGSTIEECYSAVAAVANRWL 983
            RYAVFNDDG+LAELKGFE+KRRGELKLIK+FQ ++F  FL G+T+ E Y+AVA VA+RWL
Sbjct: 937  RYAVFNDDGSLAELKGFEVKRRGELKLIKIFQTQIFKFFLEGTTLAETYAAVARVADRWL 996

Query: 984  DLLDNQGKDIADSELIDYISESSTMSKSLADYGEQKSCAVTTARRLSDFLGDTMVKDKGL 1043
            D+L   G  +AD ELI+ ISE+ +M+K+L +YG QKS ++TTARRL++FLG+ MVKDKGL
Sbjct: 997  DVLYEHGATLADEELIELISENRSMTKTLEEYGNQKSTSITTARRLAEFLGEQMVKDKGL 1056

Query: 1044 RCQYIVACEPQGTPVSERAVPVAIFETDAEIMKFYLRKWCK-TSSDVGIRSIVDWSYYKQ 1102
             C+YI++  P+ TPV+ERA+PV IF  +  I + +LRKW K    D+  RS++DW YY +
Sbjct: 1057 NCKYIISARPRNTPVTERAIPVTIFSAEDSIKRHFLRKWLKDDPGDMDPRSVIDWDYYLE 1116

Query: 1103 RLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLYKKVREKEDKFRQRKLVDIFSSLKKDDF 1162
            RL S +QK+ITIPAA+QK+ NPVPRV HP+WL +++ +++D+F+Q K+ D+F   +K   
Sbjct: 1117 RLGSVVQKLITIPAALQKIRNPVPRVAHPEWLQRRINKQDDRFKQVKMTDMFGKSEK--- 1173

Query: 1163 LNKTCNAETNLMDENVEDLEDFPKKRRNSVNGPRPIVRCFEVNNEQKTVKTTDQVDSLRQ 1222
             N   +  TN++D  V+  ++  +   +S+              E+    +  +    R+
Sbjct: 1174 -NPLSDISTNIIDHRVQHADNLDEAMADSM--------------EKLKSSSPQKASGKRK 1218

Query: 1223 QLEPSEVSDQQPSSQNAIDTENIDRIVDYKGWLELKKRKWKDNLDRR-KKQKLGSLRASH 1281
              E    +   P +       +ID   DY G+L+ +K+KWK     R ++++L   RA+ 
Sbjct: 1219 HPENQTKTSLDPFASLPAKMPSIDD--DYVGFLKYQKQKWKIQKQARLRRRQLFGERAN- 1275

Query: 1282 QANGVSESLGDMINHKEAQRRTGVGSYFRRQETAMTRCHWQIIQLVPSSQSGVFLAWVVV 1341
                   + GD ++H            FR Q   +    WQ++QL  +S+ G+  A+V++
Sbjct: 1276 -------TGGDSLSH-----------LFRNQAELLYISTWQVLQLAETSRPGIVRAFVLI 1317

Query: 1342 EGIMVRIPITVPRLFYLNSK-----DPIVEKFPGRRVNKTLPHGRRSFNLIEVMIDEDQF 1396
            +  +  + I VPR  Y+N K     D  V +    +VN TLP+G  S +L ++ + E+ F
Sbjct: 1318 DRKIHALTIKVPRCVYINLKQDSLPDVEVPECEVEKVNHTLPNGHPSVHLFKLTLSEETF 1377

Query: 1397 RKESKKLAALLADPEVE 1413
             +E+ K+  LL  P VE
Sbjct: 1378 LREADKIHVLLQHPSVE 1394



 Score =  224 bits (570), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 170/631 (26%), Positives = 295/631 (46%), Gaps = 66/631 (10%)

Query: 1407 LADPEVEVLGWQQNAAKIGMQRCAASSQWFNERISLARYAHI------------------ 1448
            ++D  +  LGWQ   AK  +      S W      LARY  +                  
Sbjct: 1588 VSDMNLPPLGWQSFIAKRLVTHYLYLSSWVQHLTMLARYGDVPLCNLESDDPRFLIDISY 1647

Query: 1449 ----------LWISDDGVPDLGGTSEEDECFADE-VHQPVLTYPGAYRKVSVELKIHHLS 1497
                      LW S    PD  G  ++D     E V  P +  PG+Y  V VEL++ +L+
Sbjct: 1648 ARRLQQNNVVLWWSSTAKPDHAGYEKDDITGPLERVGMPCVNVPGSYTTVCVELEVRNLA 1707

Query: 1498 VNALLKSNQVNEMEGGGLFGFDQDMNSGPYNNELCGFDETTSSAPAFRVVKQLIQRCLTD 1557
            +N +L S+ +NE EG        D ++    + +   ++  +SA A  V++++++   ++
Sbjct: 1708 INTILTSSIINEAEGADSLLAPSDPSAESSGSGVLYSEKAFASAGAV-VLREMVKHWWSE 1766

Query: 1558 AVTSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEFRKLGATIIF 1617
            A   GN  AD ++QHL RW+ SP S L+D  LH+ +  + +K F  L+AEFR++G+ ++F
Sbjct: 1767 AC-QGNNMADIMVQHLIRWVESPASCLYDRSLHQYVRMLSRKSFQQLMAEFRRVGSNVVF 1825

Query: 1618 ANFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLFMDQYNYGGI 1677
            A+ +++++ T K ++  A AY   +LK+++    F +I+L+   +W  L++ D+YNYGG 
Sbjct: 1826 ASPTRLLLQTSKTEVGNAYAYSQYVLKSIRANPSFHFIDLDIKEYWDYLVWYDEYNYGGK 1885

Query: 1678 PARADESLDDDSQVDIVSSWNIAEYLPKEIQDHFVLVVSEFMYIPWKHAQKLAASRASLQ 1737
              + + +  ++  ++ V  W ++ +LP  +Q  F   V E  YI   H+ K   S     
Sbjct: 1886 GCQ-EVAETEEQPLETVMHWQLSRFLPTPMQTIFHDWVVE--YIELMHSFKRPES----- 1937

Query: 1738 EGSSCTPSIT-VAAAENFESHIVQYVKGEISSYFTGKLLSIVRDAIHHMK-KMNNDQHNS 1795
               S TP +T +   +       + +   +S  F+  L   +   I   + ++ + +  S
Sbjct: 1938 -DDSSTPRLTQIPIGQPEPGQENEELSAALSDRFSKPLKKQISGLIRRQREELLHPELAS 1996

Query: 1796 -------PGVMQTAANIHKVDAPLEFIKHVCAAFALDQNVQHDVLVMRKNLLKYVRVREF 1848
                   PGV+ T  N  K +  LE +K +    +L +    +  ++R+ LL    VREF
Sbjct: 1997 DYVFPILPGVL-TDPNEEKRNPVLELVKLLMQVLSLSKTTALETRLLRRELLALFEVREF 2055

Query: 1849 APEAEFRDPCPSFILPNVICSYCNDCRDLDLCRDMALL--------------AQDWHCAM 1894
            + E  F +P  S  +P + CS C   RDLDLCRD  +L              ++ W C  
Sbjct: 2056 SKEGRFENPGSSLKIPELTCSACCLIRDLDLCRDEDVLPERGSGSGPDSATSSRPWCC-- 2113

Query: 1895 PQCGQPYDREVMENALLQIVRQRERLYHLQDLVCIRCNQVKAAHLAEQCACAGSFRCKED 1954
            P C   YDR   E  L+  V      +  QDL C +C  +K +   E C+C+G +    +
Sbjct: 2114 PFCQTEYDRLAQEEMLIGQVWGMVVAWQTQDLKCSKCGTLKISEFMEHCSCSGQWTETMN 2173

Query: 1955 ASDFRSKMQIFLNIANRQGFQLLQECTSWIL 1985
             +D   ++++  ++A     +LLQ     +L
Sbjct: 2174 RADIEKRLKVLESVAKFHELKLLQVVVEEVL 2204


>gi|410976424|ref|XP_003994621.1| PREDICTED: DNA polymerase epsilon catalytic subunit A [Felis catus]
          Length = 2212

 Score = 1380 bits (3571), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 702/1350 (52%), Positives = 935/1350 (69%), Gaps = 45/1350 (3%)

Query: 84   FRPYFYAATKEKMEMDVEAYLRRRYESQIADIEILEKEDLDLKNHLSGLHKSYLKISFDT 143
            ++PYFY AT++  E +V ++L ++++ +IA +E + KEDLDL NHL GL ++Y+K+SF+T
Sbjct: 27   YKPYFYIATRKGCEREVSSFLSKKFQGKIAKVETVPKEDLDLPNHLVGLKRNYIKLSFNT 86

Query: 144  VQQLMDVKKDLLHVVERNQAKFDAAEAYESILTG------------KREQRPQDFLDCIV 191
            V+ L+ V+KD+   V +++ +  A++AY ++L+             +  ++  D LD IV
Sbjct: 87   VEDLVRVRKDISPAVRKSREQGHASDAYTAMLSSVLQGGSVVVDEEEASKKVTDQLDNIV 146

Query: 192  DLREYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLLE--KRVDLLQRAEVHVCAFDIETT 249
            D+REYDVPYHIR +ID  +    WY+V        +E  +R DL++R +  V AFDIETT
Sbjct: 147  DMREYDVPYHIRLSIDLKIHAAHWYNVRYRGNAFPVEITRRDDLVERPDPVVLAFDIETT 206

Query: 250  KLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNVNN 309
            KLPLKFPDA+ D IMMISYM+DGQGYLI NRE V ED+ D E+TPKPE+EG F V N  +
Sbjct: 207  KLPLKFPDAETDQIMMISYMIDGQGYLITNREIVSEDVGDFEFTPKPEYEGPFCVFNEPD 266

Query: 310  EIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDKNQGECR 369
            E+ L++ WF H+QE KP I VTYNGD+FDWPF+E RAA HG  M +E+GFQ D +QGE +
Sbjct: 267  EVHLIQRWFEHVQEAKPTIMVTYNGDFFDWPFVEARAAVHGLSMYQEIGFQKD-SQGEYK 325

Query: 370  AKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQMMASY 429
            A    H+DC  WVKRDSYLP GS  LKA  KAKLGYDP+E++PEDM R A E+PQ +A+Y
Sbjct: 326  ASQCIHMDCLRWVKRDSYLPVGSHNLKAAAKAKLGYDPVELDPEDMCRMATEQPQTLATY 385

Query: 430  SVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVICPN 489
            SVSDAVATYYLYM YVHPFIF+L TIIPM PDEVLRKGSGTLCE LLMVQA+ AN++ PN
Sbjct: 386  SVSDAVATYYLYMKYVHPFIFALCTIIPMEPDEVLRKGSGTLCEALLMVQAFHANIVFPN 445

Query: 490  KHQSDPEKFYRN-HLLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQLLNNLDRDL 548
            K + +  K   + H+L++ETY+GGHVE LESGVFRSD+P  F+++P+A++ LL  +++ +
Sbjct: 446  KQEQEFNKLTDDGHVLDAETYVGGHVEALESGVFRSDIPCRFRMNPAAFDLLLQRVEKTM 505

Query: 549  QYAIKVEGKMDLESVSNYDEVKNAIMEKLLRLQEEPIREECPLIYHLDVAAMYPNIILTN 608
            ++AI+ E K+ +E V+N+ EV + I  KL  L++ P R ECPLIYHLDV AMYPNIILTN
Sbjct: 506  RHAIEEEEKVPMEQVTNFQEVCDQIKTKLTSLKDVPNRIECPLIYHLDVGAMYPNIILTN 565

Query: 609  RLQPPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYYHLKKQIESE-FVDG 667
            RLQP ++V +  C ACDFN+PG  C RK+ W WRGE     RS+Y+ ++ Q+ESE F   
Sbjct: 566  RLQPSAVVDEATCAACDFNKPGADCQRKMAWQWRGEFMPASRSEYHRIQHQLESEKFPPL 625

Query: 668  TNGHLSKSFLDLPKMEQQSRLKDRLKKYCQKAYKRVLDKPVTELREAGICMRENSFYVDT 727
            T    +++F +L + EQ    K RL  YC+KAYK++    V E R   IC RENSFYVDT
Sbjct: 626  TAEGPARAFHELSREEQAKYEKRRLSDYCRKAYKKIHVTRVEE-RLTTICQRENSFYVDT 684

Query: 728  VRSFRDRRYEYKGLNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHKCILNSFYG 787
            VR+FRDRRYE+KGL+KVWK KLS A   G++ +++  ++M VLYDSLQLAHKCILNSFYG
Sbjct: 685  VRAFRDRRYEFKGLHKVWKKKLSAAVEVGDAAEVKRCKNMEVLYDSLQLAHKCILNSFYG 744

Query: 788  YVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLPGSFPENFT 847
            YVMRKGARWYSMEMAG+V +TGA II  AR LIE+IG+PLELDTDGIWCVLP SFPENF 
Sbjct: 745  YVMRKGARWYSMEMAGIVCFTGANIITQARELIEQIGRPLELDTDGIWCVLPNSFPENFV 804

Query: 848  FKTKDLKK-KLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEFEVDGPY 906
             KT  +KK K+TISYP  MLN+ V    TNDQYQ L +P S TY T SE SI FEVDGPY
Sbjct: 805  IKTTSVKKPKVTISYPGAMLNIMVKEGFTNDQYQELTEPASLTYVTRSENSIFFEVDGPY 864

Query: 907  KAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFLHGS 966
             AMILPASKEEG  +KKRYAVFN+DG+LAELKGFEIKRRGEL+LIK+FQ+ +F+ FL GS
Sbjct: 865  LAMILPASKEEGKKLKKRYAVFNEDGSLAELKGFEIKRRGELQLIKIFQSSVFEAFLKGS 924

Query: 967  TIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLADYGEQKSCAVTTA 1026
            T+EE Y +VA VA+ WLD+L ++  ++ DSEL + ISE+ +MS+ L DYGEQKS +++TA
Sbjct: 925  TLEEVYGSVAKVADYWLDVLYSKAANMPDSELFELISENRSMSRKLEDYGEQKSTSISTA 984

Query: 1027 RRLSDFLGDTMVKDKGLRCQYIVACEPQGTPVSERAVPVAIFETDAEIMKFYLRKWCKTS 1086
            +RL++FLGD MVKD GL C+YI++ +P+G+PV+ERA+P+AIF+ +  + K +LRKW K+S
Sbjct: 985  KRLAEFLGDQMVKDAGLSCRYIISRKPEGSPVTERAIPLAIFQAEPMVRKHFLRKWLKSS 1044

Query: 1087 S--DVGIRSIVDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLYKKVREKEDK 1144
            S  D  IR+I+DW YY +RL SAIQKIITIPAA+Q+V NPVPRV HPDWL+KK+ EK D 
Sbjct: 1045 SLQDFDIRTILDWDYYIERLGSAIQKIITIPAALQQVKNPVPRVKHPDWLHKKLLEKNDI 1104

Query: 1145 FRQRKLVDIFSSLKKDDFLNKTCNAETNLMDENVEDLEDFPKKRRNSVNGPRPIVRCFEV 1204
             +Q+K+ ++F    +         A          D+ED           PR +V    V
Sbjct: 1105 CKQKKISELFVLEGRRQV--GVAQAPEGTQSLGAPDMEDL-----GLAKPPRSVV---PV 1154

Query: 1205 NNEQKTVKTTDQVDSLRQQLEPSEVSDQQPSSQNAIDTENIDRIVDYKGWLELKKRKWKD 1264
               +K V    Q +S  Q LE +    +      A+ T   + +V    WL   K+KW+ 
Sbjct: 1155 ATRRKRVLWESQGES--QDLELTVPWQEILGPPPALGTTQEEWLV----WLRFHKKKWQ- 1207

Query: 1265 NLDRRKKQKLGSLRASHQANGVSESLGDMINHKEAQRRTGVGSYFRRQETAMTRCHWQII 1324
             L  R++      R    A G  +     +  + A   TG+G + RR   ++    WQI+
Sbjct: 1208 -LQARQRLGRKKRRRLEVAEG--DPRPGAVRDRPA---TGLGGFLRRAARSILDLPWQIV 1261

Query: 1325 QLVPSSQSGVFLAWVVVEGIMVRIPITVPRLFYLNSKDPIVEKFPG-RRVNKTLPHGRRS 1383
            Q+  +SQ+G+F  W V+   +  I + +PR FY+N +    E+ P  R+V++ LP     
Sbjct: 1262 QISETSQAGLFRLWAVISSDLYCIRLNIPRQFYVNQRVAKAEEGPSYRKVSRVLPRSNVV 1321

Query: 1384 FNLIEVMIDEDQFRKESKKLAALLADPEVE 1413
            +NL E  + ED +++   ++   L+ P++E
Sbjct: 1322 YNLYEYSVPEDMYQEHVNEINTELSAPDIE 1351



 Score =  313 bits (802), Expect = 7e-82,   Method: Compositional matrix adjust.
 Identities = 192/609 (31%), Positives = 312/609 (51%), Gaps = 71/609 (11%)

Query: 1442 LARYAHILWISDDGVPDLGGTSEEDECFA---DEVHQPVLTYPGAYRKVSVELKIHHLSV 1498
            L R+ H+LW+S    PDLGG   +D       D+     +  PG Y  + VEL I +L+V
Sbjct: 1604 LQRHNHLLWLSPTARPDLGGKEADDNRLVMEFDDQASVEINCPGCYSTLCVELDIQNLAV 1663

Query: 1499 NALLKSNQVNEMEGGGLFG--FD-------QDMNSGPYNNELCG----FDETTSSAPAFR 1545
            N +L+S+ +N+MEG    G  FD       +DM +G   N+  G    +DET   +  FR
Sbjct: 1664 NTILQSHHINDMEGADSVGISFDVIQQASLEDMITG---NQAAGTPASYDETALCSSTFR 1720

Query: 1546 VVKQLIQRCLTDAVTSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLL 1605
            ++K ++   + +     N++AD  + H YRWL SP S LHDP LHR LH +M+K+F  L+
Sbjct: 1721 ILKSMVVGWVKEITQYRNIYADNQVMHFYRWLRSPSSLLHDPALHRTLHNMMKKLFLQLI 1780

Query: 1606 AEFRKLGATIIFANFSKVIIDTGKFDLSAAKAYCDSLL-KALQTRELFEWIELEPVHFWH 1664
            AEF++LG+++++ANF+++I+ T K  ++ A AY + +  ++  ++E+F  + +     W 
Sbjct: 1781 AEFKRLGSSVVYANFNRIILCTKKRRVADAIAYVEYITNRSSNSKEIFHSLTISFSRCWE 1840

Query: 1665 SLLFMDQYNYGGIPARADESL---------------------------------DDDSQV 1691
             LL+MD  NYGGI      S+                                 + D + 
Sbjct: 1841 FLLWMDPSNYGGIKGNVPSSIHCGQQDSRKEGREEEEEEEEEGGEEEEEEEGAQEPDVED 1900

Query: 1692 DIVSSWNIAEYLPK--EIQDHFVLVVSEFMYIPWKHAQKLAASRA-----SLQEGSSCTP 1744
             + ++WNI ++LP+    Q +F+++VS ++   + H+ K    R+      L+       
Sbjct: 1901 MLENNWNIVQFLPQAASCQSYFLMIVSAYIVAVY-HSMKEELRRSVPGSTPLRRRGPSQL 1959

Query: 1745 SITVAAAENFESHIVQYVKGEISSYFTGKLLSIVRDAIHHMKKMNNDQHNSPGVMQTAAN 1804
            S    A       ++ + +  +++  T    +I +     +    N    S        +
Sbjct: 1960 SQEAQAVAGALPGVITFSQDYVANELTQNFFTITQKIQKKVTGSRNATELSKMFPVLPGS 2019

Query: 1805 IHKVDAP-LEFIKHVCAAFALDQNVQHDVLVMRKNLLKYVRVREFAPEAEFRDPCPSFIL 1863
               ++ P LEFIK+VC   +LD N+ + V  + ++LL+ V V EF+ EA+FRDPC S++L
Sbjct: 2020 HLLLNNPALEFIKYVCKVLSLDTNITNQVNKLNRDLLRLVDVGEFSEEAQFRDPCRSYVL 2079

Query: 1864 PNVICSYCNDCRDLDLCR------DMALLAQDWHCAMPQCGQPYDREVMENALLQIVRQR 1917
            P VIC  CN CRDLDLC+      D A+L Q W C+   C   YD  V+E AL++ V+++
Sbjct: 2080 PEVICRSCNFCRDLDLCKEPSFSQDGAVLPQ-WLCS--NCLVAYDSSVIEMALVEAVQKK 2136

Query: 1918 ERLYHLQDLVCIRCNQVKAAHLAEQCACAGSFRCKEDASDFRSKMQIFLNIANRQGFQLL 1977
               + LQDL+C++C  VK  ++   C+CAG F        F  +++IF NIA   G   L
Sbjct: 2137 LMAFTLQDLICLKCQGVKETNMPVYCSCAGDFALTIRTKVFMDQIRIFQNIAQHYGMSYL 2196

Query: 1978 QECTSWILE 1986
             E   W+L+
Sbjct: 2197 METLEWLLQ 2205


>gi|452838359|gb|EME40300.1| hypothetical protein DOTSEDRAFT_38266 [Dothistroma septosporum NZE10]
          Length = 2712

 Score = 1380 bits (3571), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 703/1417 (49%), Positives = 940/1417 (66%), Gaps = 81/1417 (5%)

Query: 26   ELEAKLGYDLFSEGDKRLGWLLTFASSSLEDEDTRKVYSCIDLYFVSQDGSTFKSKYKFR 85
            +L+   G++ F  G KR+GWL    S+++ED       + +D YF+  +G +FK+  +++
Sbjct: 55   KLDEGQGFERFEAGKKRVGWLCNMHSTAIEDSKVPGGRAAVDFYFIGDEGVSFKASVEYQ 114

Query: 86   PYFYAATKEKMEMDVEAYLRRRYESQIADIEILEKEDLDLKNHLSGLHKSYLKISFDTVQ 145
            PYF  A K+  E +VE ++RR YE  +  +E +EKEDL + NHL G  +++LK+ F  V 
Sbjct: 115  PYFLIAVKKGKEPEVEEWVRRGYEGLVRGVERVEKEDLKMPNHLLGYRRTFLKLLFANVN 174

Query: 146  QLMDVKKDLLHVVERNQAKFDAAEAYESILTGK--------------REQRPQDFLDCIV 191
             L+ V+++L  + E+N++K  A + Y  + +                R     D  D IV
Sbjct: 175  DLLAVRRNLSPIAEKNKSKTTAMDTYAEVASANAGFDLFDDHEMLDNRRTTIADASDFIV 234

Query: 192  DLREYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLLEKRVDLLQRAEVHVCAFDIETTKL 251
            D+REYDVPYH+R AID D+R G+WY V        L    + L RA+  V A+DIETTKL
Sbjct: 235  DIREYDVPYHVRVAIDLDIRIGKWYTVEAKHGNIKLTCLEERLTRADPVVMAYDIETTKL 294

Query: 252  PLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNVNNEI 311
            PLKFPDA  D IMMISYM+DGQG+LI NRE V EDI+D +YTPKPEF+G F + N  NE 
Sbjct: 295  PLKFPDAAIDQIMMISYMIDGQGFLITNREIVSEDIQDFDYTPKPEFQGPFMIFNEPNEE 354

Query: 312  ELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDKNQGECRAK 371
             ++  +F  ++E +P + VTYNGD+FDWPF+E RA+ HG  M +E+GF+  KN  +    
Sbjct: 355  AVIERFFGMIKEARPTVMVTYNGDFFDWPFVEARASIHGIDMYQEIGFR--KNGEDIYQS 412

Query: 372  FAC-HLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQMMASYS 430
              C H+D FAWV RDSYLPQGS+GLKAVT AKLGYDP E++PE M  +A+E+PQ +A YS
Sbjct: 413  THCAHMDAFAWVSRDSYLPQGSRGLKAVTVAKLGYDPDELDPELMTPYAQERPQTLAEYS 472

Query: 431  VSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVICPNK 490
            VSDAVATYYLYM YVHPFIFSL TIIP+ PD+VLRKG+GTLCEMLLMVQAY+  ++ PNK
Sbjct: 473  VSDAVATYYLYMKYVHPFIFSLCTIIPLGPDDVLRKGTGTLCEMLLMVQAYQKEIVLPNK 532

Query: 491  HQSDPEKFYRNHLLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQLLNNLDRDLQY 550
            H    E F+  HLL+SETY+GGHVE +E+GVFRSD+P +F +D +A ++LL +LD  L++
Sbjct: 533  HVQARESFWEGHLLDSETYVGGHVESIEAGVFRSDIPNNFAIDTAAIDELLRDLDAALKF 592

Query: 551  AIKVEGKMDLESVSNYDEVKNAIMEKLLRLQEEPIREECPLIYHLDVAAMYPNIILTNRL 610
             I+VE K  LE V NY+EVK  I+++L++++ +P R E PLIYHLDVA+MYPNI+ TNRL
Sbjct: 593  CIEVEEKKKLEDVDNYEEVKAQIVDRLMQIKAQPNRSEKPLIYHLDVASMYPNIMTTNRL 652

Query: 611  QPPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYYHLKKQIESE-FVDGTN 669
            QP S++ + VC ACDFNRPGKTC R++ W WRGE    KR +Y  ++  +E+E F     
Sbjct: 653  QPDSMIDESVCAACDFNRPGKTCDRRMPWSWRGEFLPAKRDEYNMIRHALENEKFPAKHP 712

Query: 670  GHLSKSFLDLPKMEQQSRLKDRLKKYCQKAYKRVLDKPVTELREAGICMRENSFYVDTVR 729
              L+++F DL   EQ   ++ RL  Y +K Y ++ D    E REA IC REN FYVDTV+
Sbjct: 713  NGLARAFQDLSLDEQTGMVRKRLTDYSKKIYHKIHDTKTIE-REAIICQRENPFYVDTVK 771

Query: 730  SFRDRRYEYKGLNKVWKGKLSEAKASGNSI-KIQEAQDMVVLYDSLQLAHKCILNSFYGY 788
             FRDRRY++KG  KVWKGK SE + +G +  +I+EA+ M+VL+DSLQLAHK ILNSFYGY
Sbjct: 772  DFRDRRYDFKGKQKVWKGKTSELEKTGAAQNEIEEAKKMIVLFDSLQLAHKVILNSFYGY 831

Query: 789  VMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLPGSFPENFTF 848
            VMRKG+RWYSMEMAGV   TGAKIIQ AR L+E+IG+PLELDTDGIWC+LP +FPENF F
Sbjct: 832  VMRKGSRWYSMEMAGVTCLTGAKIIQLARQLVERIGRPLELDTDGIWCILPATFPENFNF 891

Query: 849  KTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEFEVDGPYKA 908
            K K+  KK+TISYPCVMLN  V    TN QYQTL D  +  Y+THS+ +I FEVDGPYKA
Sbjct: 892  KLKN-GKKITISYPCVMLNHLVHGKFTNHQYQTLTDHTNFKYKTHSDNTIFFEVDGPYKA 950

Query: 909  MILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFLHGSTI 968
            MILP SKEE   +KKRYAVFN DG+LAELKGFE+KRRGELKLIK+FQ ++F  FL GST+
Sbjct: 951  MILPTSKEEDKNLKKRYAVFNHDGSLAELKGFEVKRRGELKLIKIFQQQIFKFFLEGSTL 1010

Query: 969  EECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLADYGEQKSCAVTTARR 1028
             E Y +VA VAN+WLD+L ++G  +AD ELID I E+ +M+K+L +YG QKS A+TTA+R
Sbjct: 1011 AETYGSVARVANKWLDVLYSRGSTLADEELIDLICENKSMTKTLEEYGAQKSTAITTAKR 1070

Query: 1029 LSDFLGDTMVKDKGLRCQYIVACEPQGTPVSERAVPVAIFETDAEIMKFYLRKWCKTS-S 1087
            L++FLG+ MVKDKGL C+YI++  P+  PV+ERA+P A+   +  + +FYLRKW +    
Sbjct: 1071 LAEFLGEQMVKDKGLNCKYIISSRPKNAPVTERAIPTALLSAEEPVKRFYLRKWMREDPG 1130

Query: 1088 DVGIRSIVDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLYKKVREKEDKFRQ 1147
            D+  RSI+DW YY +RLSS IQK+ITIPAA+QKVSNPVPRV HPDWL +++R K+D+F+Q
Sbjct: 1131 DMDPRSIIDWDYYLERLSSVIQKLITIPAALQKVSNPVPRVAHPDWLARRIRTKDDRFQQ 1190

Query: 1148 RKLVDIFSSLKKDDFLNKTCNAETNLMDENVEDLEDFPKKRRNSVNGPRPIVRCFEVNNE 1207
             KL D+F               + N+M     DLEDF         G  P+ +       
Sbjct: 1191 SKLTDVFQK-------QPLAERDANIMPRVGGDLEDF---------GATPMSKL------ 1228

Query: 1208 QKTVKTTDQVDSLRQQLEPSEVSDQQPSSQNAIDTENIDRIV-----DYKGWLELKKRKW 1262
             K       V S +++      +D +P+S N  D   +  I+     DY GWL+ +K+KW
Sbjct: 1229 -KPATAAKIVSSQKRK-----ATDDKPASANPYDA--LPAIMPSITEDYTGWLKYQKKKW 1280

Query: 1263 KDNLDRRKKQKLGSLRASHQANGVSESLGDMINHKEAQRRTGVGSYFRRQETAMTRCHWQ 1322
            K     R +++                   +   K       +GS+FR Q   +    WQ
Sbjct: 1281 KIQRAARTRRRQ------------------LFGEKRQDAADAIGSFFRNQAELLYTTDWQ 1322

Query: 1323 IIQLVPSSQSGVFLAWVVVEGIMVRIPITVPRLFYLNSK-----DPIVEKFPGRR-VNKT 1376
            I+QL  +   G   A+V+++  + ++ + VPR  +LN K     D  VE     + +N T
Sbjct: 1323 ILQLRETESPGEVRAFVLIDKKVHQLKVIVPRQVFLNLKEDDLPDVTVEGVGAEKIINHT 1382

Query: 1377 LPHGRRSFNLIEVMIDEDQFRKESKKLAALLADPEVE 1413
            LP+G  S +L ++ + E  + KE +KL+ L     VE
Sbjct: 1383 LPNGHPSTHLFKLSMSEQVYVKEQEKLSMLFNHSSVE 1419



 Score =  207 bits (527), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 154/599 (25%), Positives = 268/599 (44%), Gaps = 63/599 (10%)

Query: 1402 KLAALLADPEVEVLGWQQNAAKIGMQRCAASSQWFNERISLARYAHI------------- 1448
            KL A   D  +  LGWQ   AK  +        W    ++ ++Y ++             
Sbjct: 1609 KLHADEDDKHLPPLGWQSFVAKRFVSHYLDLGSWIAHLLAFSQYGNVPLCNLEVDDPRFL 1668

Query: 1449 ---------------LWISDDGVPDLGGTSEEDECFADE-VHQPVLTYPGAYRKVSVELK 1492
                           LW S D  PD  G  ++D   + E V  P +  PG Y  V ++L 
Sbjct: 1669 IDIAYARRLQKEKVVLWWSQDARPDHAGHEKDDILGSMETVEMPAVNNPGTYSSVCIDLS 1728

Query: 1493 IHHLSVNALLKSNQVNEMEGGGLFGFDQDMNSGPYNNELCGFDETTSSAPAFR-----VV 1547
            + +L++N +L +  +NE EG    G      +G   + L    +T  S  AF       +
Sbjct: 1729 VRNLAINTILSAAMLNEAEGSDPMGIS---GAGAQEDALDETTQTIQSENAFASAGIGAL 1785

Query: 1548 KQLIQRCLTDAVTSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAE 1607
            +++++    +A T  +  AD ++QHL RW+ SP S L+D  LH  +  + +K F  L++E
Sbjct: 1786 REMVRGWWQEACTGSSSMADLLVQHLVRWVESPSSHLYDRNLHYYVQVMSRKAFQQLMSE 1845

Query: 1608 FRKLGATIIFANFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLL 1667
            FR++G+ ++FAN  ++++ T K ++  A AY   +LK + T+  F +++L    +W  L 
Sbjct: 1846 FRRVGSHVVFANAGRLLLQTSKAEVGNAFAYSQYILKTISTKPAFNFLDLTITEYWDYLA 1905

Query: 1668 FMDQYNYGGIPARADESLD-DDSQVDIVSSWNIAEYLPKEIQDHFVLVVSEFMYIPWKHA 1726
            + D++NYGG      E ++ ++ Q+ ++  W +A +LP  +Q  F   + E  YI   H 
Sbjct: 1906 WYDEFNYGG--KGCTEVVEAENQQLKMIMHWQMATFLPPILQPEFNDWIVE--YIELMHQ 1961

Query: 1727 QKLAASRASLQEGSSCTPSITVAAAENFESHIVQYVKGEISSYFTGKLLS------IVRD 1780
            +K       L  G+     + + A+        Q   G + S    K L       + R 
Sbjct: 1962 RK---RHDGLNNGTPRATQLPIHASIFNSEKEDQTTPGNVLSKTFSKPLQKQILQLLRRQ 2018

Query: 1781 AIHHMKKMNNDQHNSPGVMQTAANIHKVDAPLEFIKHVCAAFALDQNVQHDVLVMRKNLL 1840
                M +        P +  +  N+   +  LE +K +    +LD+ +  +  ++RK+LL
Sbjct: 2019 RTESMIEELLPDWTFPTLPGSHLNLQ--NPVLELVKSIMQVLSLDKTITLEARLLRKDLL 2076

Query: 1841 KYVRVREFAPEAEFRDPCPSFILPNVICSYCNDCRDLDLCRDMALLA---QDWH------ 1891
                +REF+ +  F +P  S  L  + C  C   +D+DLCRD  LL+    + H      
Sbjct: 2077 HLFDIREFSSDGSFTNPSSSLSLKQLSCPDCCIPKDIDLCRDQDLLSLGGDNQHQTVLVA 2136

Query: 1892 -CAMPQCGQPYDREVMENALLQIVRQRERLYHLQDLVCIRCNQVKAAHLAEQCACAGSF 1949
             C  P CG  +    +E  L+  V++    +  QDL C +C +V+     + C CAG +
Sbjct: 2137 QCDNPGCGGKFPPLQIEERLIGDVQKMAVQWMTQDLKCRKCGKVRINDFMDHCGCAGEW 2195


>gi|119195039|ref|XP_001248123.1| hypothetical protein CIMG_01894 [Coccidioides immitis RS]
 gi|392862637|gb|EAS36709.2| DNA polymerase epsilon catalytic subunit A [Coccidioides immitis RS]
          Length = 2223

 Score = 1380 bits (3571), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 699/1413 (49%), Positives = 939/1413 (66%), Gaps = 79/1413 (5%)

Query: 27   LEAKLGYDLFSEGDKRLGWLLTFASSSLEDEDTRKVYSCIDLYFVSQDGSTFKSKYKFRP 86
            ++  +G+  F  G KR+GWL    S++++D       + ++ YF+  DG +FK+  ++ P
Sbjct: 53   IDESMGFPRFESGKKRIGWLCNMHSTTIDDPKVPGGRAGVEFYFLEDDGGSFKATVEYDP 112

Query: 87   YFYAATKEKMEMDVEAYLRRRYESQIADIEILEKEDLDLKNHLSGLHKSYLKISFDTVQQ 146
            YF  A K   EM+VE + RR++E  +   + LEKEDL + NHL G  + +L++SF  V  
Sbjct: 113  YFLIAAKRGYEMEVEEWCRRKFEGLVKSTKQLEKEDLQMPNHLLGNKRKFLQLSFANVND 172

Query: 147  LMDVKKDLLHVVERNQAKFDAAEAYESILTGKR----------EQRPQDFLDC---IVDL 193
            L+ V+K +L + E+N+   +A + Y  I +             ++    +L+    IVD+
Sbjct: 173  LLAVRKVILPIAEKNKKNVNAMDTYAEIASASAGFDMFDDEMADKTKNAYLEASEFIVDI 232

Query: 194  REYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLLEKRVDLLQRAEVHVCAFDIETTKLPL 253
            REYDVPYH+R +ID D+R G+WY V  +     L    + LQRA+  V AFDIETTKLPL
Sbjct: 233  REYDVPYHVRVSIDKDIRIGKWYTVDATHGAVSLTCIEERLQRADPVVLAFDIETTKLPL 292

Query: 254  KFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNVNNEIEL 313
            KFPD   D IMMISYM+DGQGYLI NRE V EDI + EYTPKPE++G F + N  +E   
Sbjct: 293  KFPDPVIDQIMMISYMIDGQGYLITNREIVSEDISNFEYTPKPEYQGPFTIFNEPSEKST 352

Query: 314  LRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDKNQGEC-RAKF 372
            +  +F H++E KP +  TYNGDYFDW F+E RA+  G  M  E+GF+  KN  +  ++ +
Sbjct: 353  IERFFQHVKEAKPTVIATYNGDYFDWSFVEARASVQGIDMYREIGFR--KNSEDIYQSDY 410

Query: 373  ACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQMMASYSVS 432
              H+DCFAWV RDSYLPQGS+GLKAVT AKLGYDP E++PE M R+A E+PQ +A YSVS
Sbjct: 411  CVHMDCFAWVNRDSYLPQGSRGLKAVTVAKLGYDPDELDPEVMTRYASERPQTLAEYSVS 470

Query: 433  DAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVICPNKHQ 492
            DAVATYYLYM Y+HPFIFSL TIIP++PD+VLRKG+GTLCEMLLMVQAYK N+I PNKH+
Sbjct: 471  DAVATYYLYMKYIHPFIFSLCTIIPLNPDDVLRKGTGTLCEMLLMVQAYKNNIILPNKHK 530

Query: 493  SDPEKFYRNHLLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQLLNNLDRDLQYAI 552
               E F+  HLL+SETY+GGHVE +E+GVFRSD+P +F +D +A ++LL +LD  L ++I
Sbjct: 531  DPIEAFWDGHLLDSETYVGGHVESIEAGVFRSDIPVNFSIDTTAIDELLRDLDAALTFSI 590

Query: 553  KVEGKMDLESVSNYDEVKNAIMEKLLRLQEEPIREECPLIYHLDVAAMYPNIILTNRLQP 612
             VE K  L+ ++NYD+VK  I ++L+ L+  P R E P IYHLDVA+MYPNI+ TNRLQP
Sbjct: 591  TVEEKKSLDDITNYDDVKAQISDRLMNLKNTPNRHERPSIYHLDVASMYPNIMTTNRLQP 650

Query: 613  PSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYYHLKKQIESE-FVDGTNGH 671
             S++ +  C  CDFNRPGKTC R+L W WRGE    KR +Y  +++ + +E F   T   
Sbjct: 651  DSMIKESDCAVCDFNRPGKTCDRRLPWAWRGEFLPAKRDEYNMIRRAVANEKFPGKTRDS 710

Query: 672  LSKSFLDLPKMEQQSRLKDRLKKYCQKAYKRVLDKPVTELREAGICMRENSFYVDTVRSF 731
              +SF DL + +Q   +K RL++YC+K Y ++ D    E REA IC REN FYVDTVR+F
Sbjct: 711  PLRSFDDLSESDQAKLVKSRLQEYCKKIYHKIHDSKTIE-REAIICQRENPFYVDTVRNF 769

Query: 732  RDRRYEYKGLNKVWKGKLSEAKASGNSI-KIQEAQDMVVLYDSLQLAHKCILNSFYGYVM 790
            RDRRY++KG  KVWKGK+   K SG +  +I+EA+ MVVL+DSLQLAHK ILNSFYGYVM
Sbjct: 770  RDRRYDFKGQQKVWKGKVDSLKGSGATAPEIEEAKKMVVLFDSLQLAHKVILNSFYGYVM 829

Query: 791  RKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLPGSFPENFTFKT 850
            RKG+RWYSMEMAGV   TGA IIQ AR L+E+IG+PLELDTDGIWC+LP +FPENF F  
Sbjct: 830  RKGSRWYSMEMAGVTCLTGAHIIQMARELVERIGRPLELDTDGIWCMLPATFPENFAFTL 889

Query: 851  KDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEFEVDGPYKAMI 910
            K+  KK+ ISYPCVMLN  V    TN QYQTLVDP +  YETHS+ SI FEVDGPYKAMI
Sbjct: 890  KN-GKKIAISYPCVMLNHLVHGRFTNHQYQTLVDPTTFRYETHSDNSIFFEVDGPYKAMI 948

Query: 911  LPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFLHGSTIEE 970
            LP SKEE   +KKRYAVFN DG+LAELKGFE+KRRGELKLIK+FQ ++F  FL G+T++E
Sbjct: 949  LPTSKEEDKNLKKRYAVFNHDGSLAELKGFEVKRRGELKLIKIFQTQIFKFFLEGTTLQE 1008

Query: 971  CYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLADYGEQKSCAVTTARRLS 1030
             YSAVA VANRWLD+L   G  +AD ELID I E+ +M+K+L +YG QKS ++TTARRL+
Sbjct: 1009 TYSAVAEVANRWLDVLHLHGSTLADEELIDLICENRSMTKTLEEYGSQKSTSITTARRLA 1068

Query: 1031 DFLGDTMVKDKGLRCQYIVACEPQGTPVSERAVPVAIFETDAEIMKFYLRKWCKTS-SDV 1089
            +FLGD MVKDKGL C+YI++  P+G+ ++ERAVPVAIF  +  + +F+LR+W K    D+
Sbjct: 1069 EFLGDQMVKDKGLNCKYIISAAPKGSSITERAVPVAIFSAEPNVKRFFLRRWLKEDPGDM 1128

Query: 1090 GIRSIVDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLYKKVREKEDKFRQRK 1149
              RSI+DW YY +RL S IQK+ITIPAA+QKV NPVPRV HPDWL +++  K+DKF+Q+K
Sbjct: 1129 DPRSIIDWEYYLERLGSVIQKLITIPAALQKVRNPVPRVPHPDWLQRRIDIKDDKFKQKK 1188

Query: 1150 LVDIFSSLKKDDFLNKTCNAETNLMDENVE---DLEDFPKKRRNSVNGPRPIVRCFEVNN 1206
            + D+F             +  TN+MD  +    D+ED                    ++ 
Sbjct: 1189 MTDLFDK-------TPLSSVSTNIMDHRLPTAGDIED-------------------AMST 1222

Query: 1207 EQKTVKTTDQVDSLRQQLEPSEVSDQQPSSQNAIDTENIDRIVDYKGWLELKKRKWK-DN 1265
            ++   + + Q+   R+  E S+ +D   S    + + N     DY+GWL+ +K+KWK   
Sbjct: 1223 QKLKTQISTQMSQKRKAPESSQSTDPFASLPAKMPSMN----EDYEGWLKYQKQKWKIQK 1278

Query: 1266 LDRRKKQKLGSLRASHQANGVSESLGDMINHKEAQRRTGVGSYFRRQETAMTRCHWQIIQ 1325
              R +++KL   R +   + +S                   ++FR Q        WQI+Q
Sbjct: 1279 HARLRRRKLFGERTNVATDALS-------------------NFFRNQAELTYVSTWQILQ 1319

Query: 1326 LVPSSQSGVFLAWVVVEGIMVRIPITVPRLFYLNSKDPI-----VEKFPGRRVNKTLPHG 1380
               +   G   A+V+++  +  I + VPR  ++N +D       +E    ++VN  LP+G
Sbjct: 1320 FRETDIPGEIRAFVLIDRKVHAITVKVPRQLFINFRDDQLPDVDIEGCTVQKVNHALPNG 1379

Query: 1381 RRSFNLIEVMIDEDQFRKESKKLAALLADPEVE 1413
              S +L ++ + E  + K+   ++ALL  P VE
Sbjct: 1380 HPSVHLFQLTMPEFTYVKDVATISALLDHPSVE 1412



 Score =  256 bits (655), Expect = 7e-65,   Method: Compositional matrix adjust.
 Identities = 170/624 (27%), Positives = 302/624 (48%), Gaps = 55/624 (8%)

Query: 1408 ADPEVEVLGWQQNAAKIGMQRCAASSQWFNERISLARYAHI------------------- 1448
            +D E+  LGWQ   AK  +    A   W N  I  ARY  I                   
Sbjct: 1608 SDNELPRLGWQPFVAKQIVMHYLALDSWINHLIEFARYGDIPLCNLERDDPKFLIDIAYA 1667

Query: 1449 ---------LWISDDGVPDLGGTSEED-ECFADEVHQPVLTYPGAYRKVSVELKIHHLSV 1498
                     LW S + +PD  G  +++      +V  P +  PGAY  V ++L + +L++
Sbjct: 1668 RRLEQNNVVLWWSPNPLPDHAGYEKDNINSLIQKVDMPTINNPGAYSSVCIDLDVRNLAI 1727

Query: 1499 NALLKSNQVNEMEGGGLFGFDQDMNSGPYNNELCG--FDETTSSAPAFRVVKQLIQRCLT 1556
            N +L S+ +N++EG      +    +G   ++  G  + +T  S+    V++ +++    
Sbjct: 1728 NTILTSSLINDLEGSESVLLNPSAPTGQEVSDGTGVLYSDTAFSSAGIVVLRDMVKAWWA 1787

Query: 1557 DAVTSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEFRKLGATII 1616
            +A   G V AD ++QHL RW+ SP   L+D  LH+ +  + +K    L+ +FR++G+++I
Sbjct: 1788 EAC-QGKVMADVMVQHLIRWVESPDCNLYDRALHQYVQMMSKKALQQLMGDFRRVGSSVI 1846

Query: 1617 FANFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLFMDQYNYGG 1676
            FA+ +++++ T K ++  A AY   +LK+++++ LF +++LE   +W  LL+ D++NYGG
Sbjct: 1847 FASPNRLLLQTTKTEVGNAYAYSQYILKSIKSKPLFNFLDLEIKEYWEYLLWYDEFNYGG 1906

Query: 1677 IPARADESLDDDSQ-VDIVSSWNIAEYLPKEIQDHFVLVVSEFMYIPWKHAQKLAASRAS 1735
                  E ++ +SQ ++ +  W +A +LP  +Q  F   V E++ I       L  S  S
Sbjct: 1907 --KACHEVVESNSQELETIMHWQMAGFLPSPLQPVFNDWVVEYIEI----MHGLKKSNKS 1960

Query: 1736 LQEGSSCTPSITVAAAENFESHIVQYVKGE-ISSYFTGKLLSIV---RDAIHHMKKMNN- 1790
            L    S    I   +    E   V  V  E  S     +++ ++   RD + H + +++ 
Sbjct: 1961 LDSDESRPTQIQFKSMAETEGIDVTNVLSESYSKALKRQIVGLIRRQRDEMLHPELVSDY 2020

Query: 1791 DQHNSPGVMQTAANIHKVDAPLEFIKHVCAAFALDQNVQHDVLVMRKNLLKYVRVREFAP 1850
            D    PG         + +  LE +K++    +L ++   +V ++R+ LL    ++EF+ 
Sbjct: 2021 DFPALPGAFWHDTKRER-NPTLELVKYLTHVLSLSKHTSLEVRILRRELLALFDIKEFSD 2079

Query: 1851 EAEFRDPCPSFILPNVICSYCNDCRDLDLCRDMALLAQD--------WHCAMPQCGQPYD 1902
              +F +P  S  LP +IC++C   RDLDLCRD  LL ++        W C    CG  YD
Sbjct: 2080 AGKFENPSASLKLPQLICNHCTMSRDLDLCRDGDLLPEEGGSAASKAWCCLY--CGTEYD 2137

Query: 1903 REVMENALLQIVRQRERLYHLQDLVCIRCNQVKAAHLAEQCACAGSFRCKEDASDFRSKM 1962
            R  +E  ++  V+     +  QDL C +C  +    L E C+C G +    D      K+
Sbjct: 2138 RLALEERMISEVQGIVVEWQTQDLKCEKCGGLMVNPLMEHCSCGGRWTTMLDRRAAERKV 2197

Query: 1963 QIFLNIANRQGFQLLQECTSWILE 1986
            +IF ++A   G ++L   T+ +L+
Sbjct: 2198 RIFKSVAEFYGLKMLTIVTNGVLD 2221


>gi|134083163|emb|CAK48615.1| unnamed protein product [Aspergillus niger]
          Length = 2208

 Score = 1379 bits (3569), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 703/1400 (50%), Positives = 948/1400 (67%), Gaps = 67/1400 (4%)

Query: 27   LEAKLGYDLFSEGDKRLGWLLTFASSSLEDEDTRKVYSCIDLYFVSQDGSTFKSKYKFRP 86
            ++  LG+  +  G+KR+GWL+   S+S+ED +     + +D YF+   G +FK+  ++ P
Sbjct: 54   IDESLGFPRYESGEKRVGWLINMHSTSIEDPNVPGGRAGVDYYFLEDGGGSFKATVEYDP 113

Query: 87   YFYAATKEKMEMDVEAYLRRRYESQIADIEILEKEDLDLKNHLSGLHKSYLKISFDTVQQ 146
            YF  A K+  E +VE + RR +E  I  +  +EKEDL L NHL G  +++L+++F +V  
Sbjct: 114  YFLIAVKKGRETEVEDWCRRTFEGLIKKVLRVEKEDLKLPNHLLGYKRTFLQLNFASVSH 173

Query: 147  LMDVKKDLLHVVERNQAKFDAAEAYESILTGKREQRPQDFLDCIVDLREYDVPYHIRFAI 206
            L++V+K LL + E+N+   +  + Y  I +           D I+D+REYDVPYH+R +I
Sbjct: 174  LLEVRKTLLPLAEKNKKNVNVMDTYMEISS-----------DFIIDIREYDVPYHVRVSI 222

Query: 207  DNDVRCGQWYDVSISSTGPLLEKRVDLLQRAEVHVCAFDIETTKLPLKFPDADYDIIMMI 266
            D D+R G+WY V        L    + L RA+  V AFDIETTKLPLKFPD+  D IMMI
Sbjct: 223  DKDIRIGKWYTVEAKHGVISLTCIEERLTRADPVVLAFDIETTKLPLKFPDSVIDQIMMI 282

Query: 267  SYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNVNNEIELLRLWFAHMQEVKP 326
            SYM+DGQG+LI NRE V EDI D EYTPKPE+ G F + N  +E  +L  +F H++E KP
Sbjct: 283  SYMIDGQGFLITNREIVSEDINDFEYTPKPEYSGPFMIFNEPDERGVLERFFEHIKEAKP 342

Query: 327  GIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDKNQGECRAKFAC-HLDCFAWVKRD 385
             +  TYNGD+FDWPF+E RA+  G  M  E+GF+  KN  +      C H+DCFAWV RD
Sbjct: 343  TVIATYNGDFFDWPFVEARASVLGIDMYREIGFR--KNSEDIYQSDHCVHMDCFAWVNRD 400

Query: 386  SYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQMMASYSVSDAVATYYLYMTYV 445
            SYLPQGS+GLKAVT AKLGYDP E++PE M  +A E+PQ +A YSVSDAVATYYLYM YV
Sbjct: 401  SYLPQGSRGLKAVTVAKLGYDPDELDPELMTPYASERPQTLAEYSVSDAVATYYLYMKYV 460

Query: 446  HPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVICPNKHQSDPEKFYRNHLLE 505
            HPFIFSL TI+P++PD+ LRKG+GTLCEMLLMVQAY+ N++ PNKH+  PE FY  HLLE
Sbjct: 461  HPFIFSLCTILPINPDDTLRKGTGTLCEMLLMVQAYQGNIVLPNKHKDPPESFYEGHLLE 520

Query: 506  SETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQLLNNLDRDLQYAIKVEGKMDLESVSN 565
            SETY+GGHVE +E+GVFRSD+P +F + P+A ++LL +LD  L+++I+VE K  ++ V+N
Sbjct: 521  SETYVGGHVESIEAGVFRSDIPVTFNVQPAAIDELLRDLDAALKFSIEVEEKKSMDDVTN 580

Query: 566  YDEVKNAIMEKLLRLQEEPIREECPLIYHLDVAAMYPNIILTNRLQPPSIVTDEVCTACD 625
            Y+EVK  I +KL+ L+E P R+E P IYHLDVA+MYPNI++TNRLQP S++ +  C ACD
Sbjct: 581  YEEVKKQIADKLIDLKERPHRDEVPFIYHLDVASMYPNIMITNRLQPDSMIQESNCAACD 640

Query: 626  FNRPGKTCLRKLEWVWRGEIFMGKRSDYYHLKKQIESEFVDGTNGHLS-KSFLDLPKMEQ 684
            FNRPGKTC R+L W WRGE    KR +Y  +++ + +E   G + +   +SF D+   EQ
Sbjct: 641  FNRPGKTCDRRLPWAWRGEFLPAKRDEYNMIRQAVANERFPGKHKNSPMRSFGDMSIEEQ 700

Query: 685  QSRLKDRLKKYCQKAYKRVLDKPVTELREAGICMRENSFYVDTVRSFRDRRYEYKGLNKV 744
               +K RL+ Y +K Y ++ D   T +REA IC REN FYVDTVRSFRDRRY++KG  KV
Sbjct: 701  AGIIKKRLQDYSKKIYHKIHDSK-TMVREAIICQRENPFYVDTVRSFRDRRYDFKGKQKV 759

Query: 745  WKGKLSEAKASGNS-IKIQEAQDMVVLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAG 803
            WKGK    K+SG S  +++EA+ M+VLYDSLQLAHK ILNSFYGYVMRKG+RWYSMEMAG
Sbjct: 760  WKGKTDALKSSGASAAEVEEAKKMIVLYDSLQLAHKVILNSFYGYVMRKGSRWYSMEMAG 819

Query: 804  VVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLPGSFPENFTFKTKDLKKKLTISYPC 863
            V   TGA+IIQ AR L+E+IG+PLELDTDGIWC+LPGSFPENF+F  K+  KKL ISYPC
Sbjct: 820  VTCLTGARIIQMARELVERIGRPLELDTDGIWCMLPGSFPENFSFTLKN-GKKLGISYPC 878

Query: 864  VMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEFEVDGPYKAMILPASKEEGILIKK 923
            VMLN  V  + TN QYQTLVD  +  YE +SE SI FEVDGPYKAMILP SKEE   +KK
Sbjct: 879  VMLNHLVHGSYTNHQYQTLVDQATFRYEQNSENSIFFEVDGPYKAMILPTSKEEDKNLKK 938

Query: 924  RYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFLHGSTIEECYSAVAAVANRWL 983
            RYAVFN DG+LAELKGFE+KRRGELKLIK+FQ ++F  FL G+T+ E Y+AVA VA+RWL
Sbjct: 939  RYAVFNHDGSLAELKGFEVKRRGELKLIKIFQTQIFRFFLEGTTLTETYAAVAKVADRWL 998

Query: 984  DLLDNQGKDIADSELIDYISESSTMSKSLADYGEQKSCAVTTARRLSDFLGDTMVKDKGL 1043
            D+L   G  +AD ELID ISE+ +M+K+L +YG QKS ++TTARRL++FLG+ MVKDKGL
Sbjct: 999  DVLYEHGATLADEELIDLISENRSMTKTLEEYGNQKSTSITTARRLAEFLGEQMVKDKGL 1058

Query: 1044 RCQYIVACEPQGTPVSERAVPVAIFETDAEIMKFYLRKWCKTS-SDVGIRSIVDWSYYKQ 1102
             C+YI++ +P+ TPV+ERA+PVAIF  +  + +F+LRKW K    D+  R+++DW YY +
Sbjct: 1059 NCKYIISSKPRNTPVTERAIPVAIFSAEENVKRFFLRKWLKDDPGDMDPRTVIDWDYYLE 1118

Query: 1103 RLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLYKKVREKEDKFRQRKLVDIFSSLKKDDF 1162
            RL S +QK+ITIPAA+QK+ NPVPRV HPDWL +++  K+D+F+Q K+ D+F    K + 
Sbjct: 1119 RLGSVVQKLITIPAALQKIRNPVPRVAHPDWLQRRINTKDDRFKQTKMTDMFIKSDKPE- 1177

Query: 1163 LNKTCNAETNLMDENVEDLEDFPKKRRNSVNGPRPIVRCFEVNNEQKTVKTTDQVDSL-R 1221
             N   +  TN++D  V+   D  +   NS    +P       ++E K  +     + L +
Sbjct: 1178 KNPLTDISTNILDHRVQHTGDLDEAIANSTQKLKP-------SSETKVSQKRKHPEGLSK 1230

Query: 1222 QQLEP-SEVSDQQPSSQNAIDTENIDRIVDYKGWLELKKRKWKDNLDR--RKKQKLGSLR 1278
              L+P + +  Q PS  +           DY G+L+ +K+KWK       R++Q  G   
Sbjct: 1231 TSLDPFATLPAQMPSMAD-----------DYVGFLKYQKQKWKIQKQARIRRRQLFG--- 1276

Query: 1279 ASHQANGVSESLGDMINHKEAQRRTGVGSYFRRQETAMTRCHWQIIQLVPSSQSGVFLAW 1338
               +AN   +SL ++               FR Q   +    WQI+QL  + + G+  A+
Sbjct: 1277 --ERANAGGDSLSNL---------------FRNQAELLYINTWQILQLSETGRPGIVRAF 1319

Query: 1339 VVVEGIMVRIPITVPRLFYLNSK-----DPIVEKFPGRRVNKTLPHGRRSFNLIEVMIDE 1393
            V+++  +  + + VPR  Y+N K     D  V      +V  TLP+G  S +L ++ + E
Sbjct: 1320 VLIDRKIHALTVKVPRQIYVNLKQDSLPDVDVPDCEVEKVTHTLPNGHPSVHLFKLTLSE 1379

Query: 1394 DQFRKESKKLAALLADPEVE 1413
            + + +E++K+  L   P VE
Sbjct: 1380 ETYLREAEKIDVLFQHPSVE 1399



 Score =  236 bits (602), Expect = 9e-59,   Method: Compositional matrix adjust.
 Identities = 177/630 (28%), Positives = 293/630 (46%), Gaps = 69/630 (10%)

Query: 1407 LADPEVEVLGWQQNAAKIGMQRCAASSQWFNERISLARYAHI------------------ 1448
            ++D ++  LGWQ   A+  +      S W      LARY  +                  
Sbjct: 1594 VSDMDLPPLGWQSFIARRLVTHYLYLSAWVQHLTLLARYGDVPLCNLENDDPRFLIDISY 1653

Query: 1449 ----------LWISDDGVPDLGGTSEED-ECFADEVHQPVLTYPGAYRKVSVELKIHHLS 1497
                      LW S +  PD  G  ++D     ++V  P +  P AY  V +EL++ +L+
Sbjct: 1654 ARRLQQNNVVLWWSSNPRPDHAGYEKDDISGPLEKVSMPSVNVPSAYTTVCIELEVRNLA 1713

Query: 1498 VNALLKSNQVNEMEGGGLFGFDQDMNSGPYNNELCGFDETTSSAPAFRVVKQLIQRCLTD 1557
            +N +L S+ +NEMEG          ++ P    +   ++  +SA A  V++++++   T+
Sbjct: 1714 INTILTSSIINEMEGADTLLASSGQSADPNGGGVLYSEKAFASAGAV-VLREMVKHWWTE 1772

Query: 1558 AVTSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEFRKLGATIIF 1617
            A   GN  AD ++QHL RW+ SP S L+D  LH  +  + +K F  L+AEFR++G+ +IF
Sbjct: 1773 AC-DGNSMADIMVQHLIRWVESPVSCLYDRSLHHYVRMLSRKSFQRLMAEFRRVGSNVIF 1831

Query: 1618 ANFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLFMDQYNYGGI 1677
            A+ +++++ T K ++  A AY   +LK+++    F +I+LE   +W  LL+ D+YNYGG 
Sbjct: 1832 ASSTRLLLQTSKTEVGNAYAYSQYVLKSIRANPSFHFIDLEIKEYWDYLLWYDEYNYGG- 1890

Query: 1678 PARADESLDDDSQ-VDIVSSWNIAEYLPKEIQDHFVLVVSEFMYIPWKHAQKLAASRAS- 1735
                 E ++ D Q ++ V  W +   LP  +Q  F   V E  YI   H  K   +  S 
Sbjct: 1891 -KGCQEVVESDEQELETVMHWQLNRTLPTPMQTIFHDWVVE--YIELMHGLKRPDTNDST 1947

Query: 1736 --LQEGSSCTPS------ITVAAAENFESHIVQYVKGEISSYFTGKLLSIVRDAIHHMKK 1787
              L +     PS      ++ A AE F   + + + G         L+   RD + H + 
Sbjct: 1948 PRLTQIPIGRPSDEDSQEVSAALAEKFSKPLKKQITG---------LIRRQRDELLHPEL 1998

Query: 1788 MNNDQHNS-PGVMQTAANIHKVDAPLEFIKHVCAAFALDQNVQHDVLVMRKNLLKYVRVR 1846
             ++      PGV+ +  N  K +  LE +K +    +L +    +  ++R+ LL    VR
Sbjct: 1999 ASDYIFPVLPGVL-SDPNEEKRNPVLELVKLLMQVLSLSKITTMETRLLRRELLALFEVR 2057

Query: 1847 EFAPEAEFRDPCPSFILPNVICSYCNDCRDLDLCRDMALL-----------AQDWHCAMP 1895
            EF+ E  F +P  S  +P + C  C   RDLDLCRD  +L            + W C  P
Sbjct: 2058 EFSKEGRFENPGASLKIPELTCGSCCLIRDLDLCRDEDVLPEPGVDASKTSTKPWRC--P 2115

Query: 1896 QCGQPYDREVMENALLQIVRQRERLYHLQDLVCIRCNQVKAAHLAEQCACAGSFRCKEDA 1955
             C   YDR   E  L+  ++     +  QDL C +C  +K +   E C+C+G +    D 
Sbjct: 2116 FCQTEYDRLAQEEILIGQIQGYIVGWQTQDLKCSKCGTLKVSDFMEHCSCSGVWVETMDR 2175

Query: 1956 SDFRSKMQIFLNIANRQGFQLLQECTSWIL 1985
             +   K+ I  ++A   G +LL+     +L
Sbjct: 2176 KEIERKLHILNSVAKFHGLKLLESVVGEVL 2205


>gi|296815126|ref|XP_002847900.1| DNA polymerase epsilon catalytic subunit A [Arthroderma otae CBS
            113480]
 gi|238840925|gb|EEQ30587.1| DNA polymerase epsilon catalytic subunit A [Arthroderma otae CBS
            113480]
          Length = 2231

 Score = 1379 bits (3568), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 715/1418 (50%), Positives = 954/1418 (67%), Gaps = 84/1418 (5%)

Query: 26   ELEAKLGYDLFSEGDKRLGWLLTFASSSLEDEDTRKVYSCIDLYFVSQDGSTFKSKYKFR 85
            E++  +G+  +  G KR+GWL    S+++ED       + ++ YF+  +G +FK+  ++ 
Sbjct: 52   EIDETMGFARYEAGKKRIGWLCNMHSTTIEDSKIPGGRAAVEFYFLEDNGGSFKAAVEYD 111

Query: 86   PYFYAATKEKMEMDVEAYLRRRYESQIADIEILEKEDLDLKNHLSGLHKSYLKISFDTVQ 145
            PYF  ATK   E++VE + +R +E  +  I+++EKEDL + NHL G  + +L++SF  V 
Sbjct: 112  PYFLIATKRGHELEVEEWCKRTFEGLVKSIKVVEKEDLQMPNHLLGYKRKFLQLSFANVM 171

Query: 146  QLMDVKKDLLHVVERNQAKFDAAEAYESI-------------LTGKREQRPQDFLDCIVD 192
             L+ V+K +  +  +N+   +A + Y  +             +  + +   QD  D IVD
Sbjct: 172  DLLAVRKTIAPIATKNRKNVNAMDTYAELASANAGFDLFDDDVNSRGQNSLQDATDYIVD 231

Query: 193  LREYDVPYHIRFAIDNDVRCGQWYDV-SISSTGPL--LEKRVDLLQRAEVHVCAFDIETT 249
            +REYDVPYH+R +ID D+R G+WY V SI     L  LE+R   LQRA+  V A+DIETT
Sbjct: 232  IREYDVPYHVRVSIDKDIRIGKWYTVQSIQGLISLTCLEER---LQRADPVVLAYDIETT 288

Query: 250  KLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNVNN 309
            KLPLKFPDA  D IMMISYM+DGQGYLI NRE V EDI D EYTPK E+ G F + N  +
Sbjct: 289  KLPLKFPDAAIDQIMMISYMIDGQGYLITNREIVSEDINDFEYTPKSEYHGPFTIFNEPD 348

Query: 310  EIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDKNQGEC- 368
            E  +L  +F H+++ KP + VTYNGD+FDWPF+E RA+  G  M  E+GF+  KN  +  
Sbjct: 349  EKRVLERFFDHIKKAKPSVIVTYNGDFFDWPFVEARASVQGIDMYAEIGFR--KNSEDIY 406

Query: 369  RAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQMMAS 428
            ++ +  H+D F+WV RDSYLPQGS+GLKAVT AKLGYDP E++PE M ++A E+PQ +A 
Sbjct: 407  QSDYCVHMDAFSWVNRDSYLPQGSRGLKAVTVAKLGYDPDELDPELMTKYASERPQTLAE 466

Query: 429  YSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVICP 488
            YSVSDAVATYYLYM YVHPFIFSL TIIP+SPDEVLRKG+GTLCEMLLMVQAY+ N+I P
Sbjct: 467  YSVSDAVATYYLYMKYVHPFIFSLCTIIPLSPDEVLRKGTGTLCEMLLMVQAYQHNIILP 526

Query: 489  NKHQSDPEKFYRNHLLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQLLNNLDRDL 548
            NKH    E FY  HLL+SETY+GGHVE +E+GVFR D+P +F +D +A ++LL +LD  L
Sbjct: 527  NKHMDPNESFYEGHLLDSETYVGGHVESIEAGVFRCDIPVNFTIDTTAIDELLRDLDAAL 586

Query: 549  QYAIKVEGKMDLESVSNYDEVKNAIMEKLLRLQEEPIREECPLIYHLDVAAMYPNIILTN 608
            +++I VE K  LE V NY EVK  I E+LL+L++ P R+E P IYHLDVA+MYPNI+ TN
Sbjct: 587  EFSITVEEKKSLEDVVNYSEVKAQITERLLKLKDSPNRKERPSIYHLDVASMYPNIMTTN 646

Query: 609  RLQPPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYYHLKKQIESE-FVDG 667
            RLQP S++ +  C ACDFNRPGKTC R+L W WRGE    KR +Y  +++ + +E F   
Sbjct: 647  RLQPDSMIKESDCAACDFNRPGKTCDRRLPWSWRGEFLPAKRDEYNMIRRAVANEKFPGK 706

Query: 668  TNGHLSKSFLDLPKMEQQSRLKDRLKKYCQKAYKRVLDKPVTELREAGICMRENSFYVDT 727
            T  H  +SF  L + EQ + +K RL++Y +K Y ++ +    E REA IC REN FYVDT
Sbjct: 707  TKHHPPRSFESLSESEQATIVKKRLQEYSKKIYHKIRETRTIE-REAIICQRENPFYVDT 765

Query: 728  VRSFRDRRYEYKGLNKVWKGKLSEAKASGNS-IKIQEAQDMVVLYDSLQLAHKCILNSFY 786
            VR+FRDRRY++KG  KVWKGK+   K+SG +  +I+EA+ MVVL+DSLQLAHK ILNSFY
Sbjct: 766  VRNFRDRRYDFKGKQKVWKGKVESLKSSGAANSEIEEAKKMVVLFDSLQLAHKVILNSFY 825

Query: 787  GYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLPGSFPENF 846
            GYVMRKG+RWYSMEMAGV   TGA IIQ AR L+E+IG+PLELDTDGIWC+LP +FPENF
Sbjct: 826  GYVMRKGSRWYSMEMAGVTCLTGAHIIQMARELVERIGRPLELDTDGIWCMLPATFPENF 885

Query: 847  TFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEFEVDGPY 906
             FK  +  KKL ISYPCVMLN  V    TNDQYQTL DP +  Y THS+ SI FEVDGPY
Sbjct: 886  VFKLVN-GKKLAISYPCVMLNHLVHGRFTNDQYQTLTDPATFKYTTHSDNSIFFEVDGPY 944

Query: 907  KAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFLHGS 966
            +AMILP SKEE   +KKRYAVFN DG+LAELKGFE+KRRGELKLIKVFQ ++F  FL G+
Sbjct: 945  RAMILPTSKEEDKNLKKRYAVFNHDGSLAELKGFEVKRRGELKLIKVFQTQIFKFFLEGT 1004

Query: 967  TIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLADYGEQKSCAVTTA 1026
            T+EE Y AVA VANRWLD+L   G  +AD ELID I E+ +MSK++ +YG QKS ++TTA
Sbjct: 1005 TLEETYGAVAEVANRWLDVLHMHGSTLADEELIDMICENRSMSKTIEEYGGQKSTSITTA 1064

Query: 1027 RRLSDFLGDTMVKDKGLRCQYIVACEPQGTPVSERAVPVAIFETDAEIMKFYLRKWCKTS 1086
            +RL++FLG+ M+KDKGL C+YI++  P+ +P++ERAVPVAIF  +  I +F+LRKW K  
Sbjct: 1065 KRLAEFLGEQMIKDKGLNCKYIISSAPRNSPITERAVPVAIFSAEDNIKRFFLRKWMKED 1124

Query: 1087 -SDVGIRSIVDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLYKKVREKEDKF 1145
              D+  R+I+DW YY +RL S IQK+ITIPAA+QK+SNPVPRV HPDWL +++  KED+F
Sbjct: 1125 PGDMDPRTIIDWDYYLERLGSVIQKLITIPAALQKISNPVPRVAHPDWLQRRINTKEDRF 1184

Query: 1146 RQRKLVDIFSSLKKDDFLNKTCNAETNLMDENVE---DLEDFPKKRRNSVNGPRPIVRCF 1202
            +Q+K+ ++F+        N   N  TN+MD  +    D+ED   +R +   G +P     
Sbjct: 1185 KQKKMTELFTK-------NPLANLSTNIMDHRIPAAGDIEDL-MQRGSQKPGTQP----- 1231

Query: 1203 EVNNEQKTVKTTDQVDSLRQQLEPSEVSDQQPSSQNAIDTENIDRIVDYKGWLELKKRKW 1262
              N+ QK     D V S   Q   + +    PS      TEN      Y+ WL  +K+KW
Sbjct: 1232 GNNHTQKRKAPGDTVTS---QDPFASLPPTMPSI-----TEN------YEDWLRYQKQKW 1277

Query: 1263 KDNLDR--RKKQKLGSLRASHQANGVSESLGDMINHKEAQRRTGVGSYFRRQETAMTRCH 1320
            K       R+++  G+++ +      S+S               +G +FR Q        
Sbjct: 1278 KIQKQARLRRRKLFGAMKTT-----ASDS---------------IGGFFRNQAELTYVNT 1317

Query: 1321 WQIIQLVPSSQSGVFLAWVVVEGIMVRIPITVPRLFYLNSKD---PIVE--KFPGRRVNK 1375
            WQI+QL  +   G   A+V+++  +  I I +PR  ++N KD   P V+      ++VN 
Sbjct: 1318 WQILQLRETGSPGEVRAFVLIDRKVHTITIKIPRHIFINFKDVDLPDVDITDCSVQKVNH 1377

Query: 1376 TLPHGRRSFNLIEVMIDEDQFRKESKKLAALLADPEVE 1413
            TLP+G  S +L ++ + E+ + +E+ K++ LL  P VE
Sbjct: 1378 TLPNGHPSVHLFQLSMPEEVYLREASKISLLLNHPSVE 1415



 Score =  231 bits (589), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 159/631 (25%), Positives = 301/631 (47%), Gaps = 64/631 (10%)

Query: 1408 ADPEVEVLGWQQNAAKIGMQRCAASSQWFNERISLARYAHI------------------- 1448
            +D E+  LGWQ  AA+  +    A   W +  +  ARY ++                   
Sbjct: 1611 SDNELPPLGWQAYAARQIVMHYLALDSWISHLLGFARYGNVPIGNLEKDDPKHLIDILYA 1670

Query: 1449 ---------LWISDDGVPDLGGTSEEDECFA--DEVHQPVLTYPGAYRKVSVELKIHHLS 1497
                     LW S   +PD GG  E+D      + V    +  PG+Y  V +EL++ +L+
Sbjct: 1671 RRLEQSNVVLWWSSSPLPDHGGY-EKDNILGPLNSVEMTSVNTPGSYSTVCIELEVRNLA 1729

Query: 1498 VNALLKSNQVNEMEGGGLFGFDQDMNSGPYNNELCG------FDETTSSAPAFRVVKQLI 1551
            +N +L S+ ++++E       +    + P + E         + +T  SA    V++ ++
Sbjct: 1730 INTVLTSSLISDLESNEPALLNP---AAPGDQESASDGTGVLYSDTAFSAVGILVLRDMV 1786

Query: 1552 QRCLTDAVTSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEFRKL 1611
            +    +A   GN  AD ++QHL RW+ S    L+D  L++ +  +++K    L+  F+++
Sbjct: 1787 KSWWNEAC-KGNGMADVMVQHLIRWVESADCCLYDHSLYQYMQILLKKALQQLIMAFKRV 1845

Query: 1612 GATIIFANFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLFMDQ 1671
            G+ +I+AN +++++ T K ++  A AY   +L +++ + LF +++++   +W  L++ D+
Sbjct: 1846 GSNVIYANPNRLVLQTTKTEVGNAYAYSKYILNSIKEKPLFHFLDIDIKEYWDYLIWYDE 1905

Query: 1672 YNYGGIPARADESLDDDSQVDIVSSWNIAEYLPKEIQDHFVLVVSEFMYIPWKHAQKLAA 1731
            +NYGG  A  +    D+ +++ + +W I+ +LP  +Q  FV  + E++ I   H  K  A
Sbjct: 1906 FNYGG-KACQEVVAADNQELEAIMNWQISRFLPIPLQSVFVDWIVEYVEI--MHGLKKPA 1962

Query: 1732 SRASLQEGSSCTPSITVAAAENFES-HIVQYVKGEISSYFTGKLLSIV---RDAIHHMKK 1787
            +     +G+     +     E+ ES  I   +    S     +++ ++   RD + H + 
Sbjct: 1963 AGQGEADGTPRQTQLPSRPEEDSESVEITSVLSQSFSKALKKQIVGLIRRQRDEMLHPEL 2022

Query: 1788 MNNDQHNSPGVMQTAANIHKVDAPLEFIKHVCAAFALDQNVQHDVLVMRKNLLKYVRVRE 1847
             ++  ++ P +   A + H+ +  LE +K++     L +    +V ++R++LL    +RE
Sbjct: 2023 ASD--YDFPVLPGAAPSEHERNPTLELVKYLMHILGLSKYTALEVRLLRRDLLTLFDIRE 2080

Query: 1848 FAPEAEFRDPCPSFILPNVICSYCNDCRDLDLCRDMALLAQD------------WHCAMP 1895
            F+ E +F  P  S ++  +IC  C   RDLDLCRD  LL +             W C  P
Sbjct: 2081 FSDEGKFESPSSSLVMAQIICHNCTMARDLDLCRDPELLPESGTENNASTTLPPWTC--P 2138

Query: 1896 QCGQPYDREVMENALLQIVRQRERLYHLQDLVCIRCNQVKAAHLAEQCACAGSFRCKEDA 1955
             C   YDR  +E  ++  V      +  QDL C +C  +      E C+C+G +    D 
Sbjct: 2139 YCSTEYDRLFLEERIIGEVHGLVMEWQAQDLKCAKCAGIMINPFMEHCSCSGEWVGTIDR 2198

Query: 1956 SDFRSKMQIFLNIANRQGFQLLQECTSWILE 1986
                 K+Q++ +IA+  GF++L   T  +LE
Sbjct: 2199 RAIEKKLQVYQSIADFYGFKMLSMVTKGVLE 2229


>gi|4102990|gb|AAD01637.1| DNA polymerase epsilon homolog [Emericella nidulans]
          Length = 2207

 Score = 1379 bits (3568), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 701/1397 (50%), Positives = 945/1397 (67%), Gaps = 66/1397 (4%)

Query: 27   LEAKLGYDLFSEGDKRLGWLLTFASSSLEDEDTRKVYSCIDLYFVSQDGSTFKSKYKFRP 86
            ++  LG+  F  G+KR+GWL+   S+S+ED +     + +D YF+  DG +FK+  ++ P
Sbjct: 54   IDESLGFPRFEAGEKRVGWLINMHSTSIEDPNVPGGRAGVDYYFLDDDGGSFKATVEYDP 113

Query: 87   YFYAATKEKMEMDVEAYLRRRYESQIADIEILEKEDLDLKNHLSGLHKSYLKISFDTVQQ 146
            YF  A K   E +VE + RR +E  I  I+ + KEDL L NHL G  +++L++ F  V  
Sbjct: 114  YFLIAVKTGHEAEVEEWCRRMFEGLIKKIKRVVKEDLKLPNHLLGHRRTFLQLDFANVSH 173

Query: 147  LMDVKKDLLHVVERNQAKFDAAEAYESILTGKREQRPQDFLDCIVDLREYDVPYHIRFAI 206
            L++V+K LL + E+N+                R     +  D I+D+REYDVPYH+R AI
Sbjct: 174  LLEVRKTLLPLAEKNRK-------------NARPNGTTNASDFIIDIREYDVPYHVRVAI 220

Query: 207  DNDVRCGQWYDVSISSTGPLLEKRVDLLQRAEVHVCAFDIETTKLPLKFPDADYDIIMMI 266
            D D+R G+WY V  +     L    + L RA+  V AFDIETTKLPLKFPD+  D IMMI
Sbjct: 221  DKDIRIGKWYTVEATHGIISLTCLEERLTRADPVVLAFDIETTKLPLKFPDSVIDQIMMI 280

Query: 267  SYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNVNNEIELLRLWFAHMQEVKP 326
            SYM+DGQG+LI NRE V EDI+D EYTPKPE+ G F + N  NE  ++  +F H++E KP
Sbjct: 281  SYMIDGQGFLITNREIVSEDIDDFEYTPKPEYSGPFMIFNEPNERAVIERFFEHIKEAKP 340

Query: 327  GIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDKNQGECRAKFAC-HLDCFAWVKRD 385
             +  TYNGD+FDWPF+E RA+  G  M +E+GF+  KN  +      C H+DCFAWV RD
Sbjct: 341  TVIATYNGDFFDWPFVEARASVLGIDMYKEIGFR--KNSEDIYQSDHCAHMDCFAWVNRD 398

Query: 386  SYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQMMASYSVSDAVATYYLYMTYV 445
            SYLPQGS+GLKAVT AKLGYDP E++PE M  +A E+PQ +A YSVSDAVATYYLYM Y+
Sbjct: 399  SYLPQGSRGLKAVTVAKLGYDPDELDPELMTPYASERPQTLAEYSVSDAVATYYLYMKYI 458

Query: 446  HPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVICPNKHQSDPEKFYRNHLLE 505
            HPFIFSL TI+P++PD+ LRKG+GTLCEMLLMVQAYK N++ PNKH+  PE FY  HLLE
Sbjct: 459  HPFIFSLCTILPLNPDDTLRKGTGTLCEMLLMVQAYKGNIVLPNKHKDPPEAFYEGHLLE 518

Query: 506  SETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQLLNNLDRDLQYAIKVEGKMDLESVSN 565
            SETY+GGHVE +E+GVFRSD+P  F +DP+A ++LL +LD  L+++I+VE K  L+ V+N
Sbjct: 519  SETYVGGHVESIEAGVFRSDIPVPFNIDPTAVDELLRDLDAALKFSIEVEEKKSLDDVTN 578

Query: 566  YDEVKNAIMEKLLRLQEEPIREECPLIYHLDVAAMYPNIILTNRLQPPSIVTDEVCTACD 625
            Y+EVK  I + L  L+E P R E P IYHLDVA+MYPNI++TNRLQP S++ +  C ACD
Sbjct: 579  YEEVKGQIAKLLTDLRENPHRNEVPFIYHLDVASMYPNIMITNRLQPDSLIQESNCAACD 638

Query: 626  FNRPGKTCLRKLEWVWRGEIFMGKRSDYYHLKKQIESEFVDG-TNGHLSKSFLDLPKMEQ 684
            FNRPGKTC R+L W WRGE    KR +Y  +++ +++E   G T     ++F +L   EQ
Sbjct: 639  FNRPGKTCDRRLPWAWRGEFLPAKRDEYNMIRQAVQNERFPGRTKKSPMRAFTELSAEEQ 698

Query: 685  QSRLKDRLKKYCQKAYKRVLDKPVTELREAGICMRENSFYVDTVRSFRDRRYEYKGLNKV 744
             + +K RL+ Y +K Y ++ D   T +REA IC REN FYVDTVRSFRDRRY++KG  KV
Sbjct: 699  AAIVKKRLQDYSKKIYHKIHDSK-TMVREAIICQRENPFYVDTVRSFRDRRYDFKGKQKV 757

Query: 745  WKGKLSEAKASGN-SIKIQEAQDMVVLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAG 803
            WKGK    K+SG  + +I+EA+ M+VLYDSLQLAHK ILNSFYGYVMRKG+RWYSMEMAG
Sbjct: 758  WKGKTESLKSSGAPAAEIEEAKKMIVLYDSLQLAHKVILNSFYGYVMRKGSRWYSMEMAG 817

Query: 804  VVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLPGSFPENFTFKTKDLKKKLTISYPC 863
            V   TGA+IIQ AR L+E+IG+PLELDTDGIWC+LPG+FPENF+F  K+  KKL ISYPC
Sbjct: 818  VTCLTGARIIQMARELVERIGRPLELDTDGIWCMLPGTFPENFSFTLKN-GKKLGISYPC 876

Query: 864  VMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEFEVDGPYKAMILPASKEEGILIKK 923
            VMLN  V  + TN QYQ+L +P +  YETHSE SI FEVDGPY+AMILP SKEE   +KK
Sbjct: 877  VMLNHLVHGSYTNHQYQSLANPATFRYETHSENSIFFEVDGPYRAMILPTSKEEDKNLKK 936

Query: 924  RYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFLHGSTIEECYSAVAAVANRWL 983
            RYAVFNDDG+LAELKGFE+KRRGELKLIK+FQ ++F  FL G+T+ E Y+AVA VA+RWL
Sbjct: 937  RYAVFNDDGSLAELKGFEVKRRGELKLIKIFQTQIFKFFLEGTTLAETYAAVARVADRWL 996

Query: 984  DLLDNQGKDIADSELIDYISESSTMSKSLADYGEQKSCAVTTARRLSDFLGDTMVKDKGL 1043
            D+L   G  +AD ELI+ ISE+ +M+K+L +YG QKS ++TTARRL++FLG+ MVKDKGL
Sbjct: 997  DVLYEHGATLADEELIELISENRSMTKTLEEYGNQKSTSITTARRLAEFLGEQMVKDKGL 1056

Query: 1044 RCQYIVACEPQGTPVSERAVPVAIFETDAEIMKFYLRKWCK-TSSDVGIRSIVDWSYYKQ 1102
             C+YI++  P+ TPV+ERA+PV IF  +  I + +LRKW K    D+  RS++DW YY +
Sbjct: 1057 NCKYIISARPRNTPVTERAIPVTIFSAEDSIKRHFLRKWLKDDPGDMDPRSVIDWDYYLE 1116

Query: 1103 RLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLYKKVREKEDKFRQRKLVDIFSSLKKDDF 1162
            RL S +QK+ITIPAA+QK+ NPVPRV HP+WL +++ +++D+F+Q K+ D+F   +K   
Sbjct: 1117 RLGSVVQKLITIPAALQKIRNPVPRVAHPEWLQRRINKQDDRFKQVKMTDMFGKSEK--- 1173

Query: 1163 LNKTCNAETNLMDENVEDLEDFPKKRRNSVNGPRPIVRCFEVNNEQKTVKTTDQVDSLRQ 1222
             N   +  TN++D  V+  ++  +   +S+              E+    +  +    R+
Sbjct: 1174 -NPLSDISTNIIDHRVQHADNLDEAMADSM--------------EKLKSSSPQKASGKRK 1218

Query: 1223 QLEPSEVSDQQPSSQNAIDTENIDRIVDYKGWLELKKRKWKDNLDRR-KKQKLGSLRASH 1281
              E    +   P +       +ID   DY G+L+ +K+KWK     R ++++L   RA+ 
Sbjct: 1219 HPENQTKTSLDPFASLPAKMPSIDD--DYVGFLKYQKQKWKIQKQARLRRRQLFGERAN- 1275

Query: 1282 QANGVSESLGDMINHKEAQRRTGVGSYFRRQETAMTRCHWQIIQLVPSSQSGVFLAWVVV 1341
                   + GD ++H            FR Q   +    WQ++QL  +S+ G+  A+V++
Sbjct: 1276 -------TGGDSLSH-----------LFRNQAELLYISTWQVLQLAETSRPGIVRAFVLI 1317

Query: 1342 EGIMVRIPITVPRLFYLNSK-----DPIVEKFPGRRVNKTLPHGRRSFNLIEVMIDEDQF 1396
            +  +  + I VPR  Y+N K     D  V +    +VN TLP+G  S +L ++ + E+ F
Sbjct: 1318 DRKIHALTIKVPRCVYINLKQDSLPDVEVPECEVEKVNHTLPNGHPSVHLNKLTLSEETF 1377

Query: 1397 RKESKKLAALLADPEVE 1413
             +E+ K+  LL  P VE
Sbjct: 1378 LREADKIHVLLQHPSVE 1394



 Score =  223 bits (568), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 172/632 (27%), Positives = 297/632 (46%), Gaps = 68/632 (10%)

Query: 1407 LADPEVEVLGWQQNAAK-IGMQRCAASSQWFNERISLARYAHI----------------- 1448
            ++D  +  LGWQ   AK +G      SS W      LARY  +                 
Sbjct: 1588 VSDMNLPPLGWQSFIAKRLGTHYLYLSS-WVQHLTMLARYGDVPLCNLESDDPRFLIDIS 1646

Query: 1449 -----------LWISDDGVPDLGGTSEEDECFADE-VHQPVLTYPGAYRKVSVELKIHHL 1496
                       LW S    PD  G  ++D     E V  P +  PG+Y  V VEL++ +L
Sbjct: 1647 YARRLQQNNVVLWWSSTAKPDHAGYEKDDITGPLERVGMPCVNVPGSYTTVCVELEVRNL 1706

Query: 1497 SVNALLKSNQVNEMEGGGLFGFDQDMNSGPYNNELCGFDETTSSAPAFRVVKQLIQRCLT 1556
            ++N +L S+ +NE EG        D ++    + +   ++  +SA A  V++++++   +
Sbjct: 1707 AINTILTSSIINEAEGADSLLAPSDPSAESSGSGVLYSEKAFASAGAV-VLREMVKHWWS 1765

Query: 1557 DAVTSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEFRKLGATII 1616
            +A   GN  AD ++QHL RW+ SP S L+D  LH+ +  + +K F  L+AEFR++G+ ++
Sbjct: 1766 EAC-QGNNMADIMVQHLIRWVESPASCLYDRSLHQYVRMLSRKSFQQLMAEFRRVGSNVV 1824

Query: 1617 FANFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLFMDQYNYGG 1676
            FA+ +++++ T K ++  A AY   +LK+++    F +I+L+   +W  L++ D+YNYGG
Sbjct: 1825 FASPTRLLLQTSKTEVGNAYAYSQYVLKSIRANPSFHFIDLDIKEYWDYLVWYDEYNYGG 1884

Query: 1677 IPARADESLDDDSQVDIVSSWNIAEYLPKEIQDHFVLVVSEFMYIPWKHAQKLAASRASL 1736
               + + +  ++  ++ V  W ++ +LP  +Q  F   V E  YI   H+ K   S    
Sbjct: 1885 KGCQ-EVAETEEQPLETVMHWQLSRFLPTPMQTIFHDWVVE--YIELMHSFKRPES---- 1937

Query: 1737 QEGSSCTPSIT-VAAAENFESHIVQYVKGEISSYFTGKLLSIVRDAIHHMK-KMNNDQHN 1794
                S TP +T +   +       + +   +S  F+  L   +   I   + ++ + +  
Sbjct: 1938 --DDSSTPRLTQIPIGQPEPGQENEELSAALSDRFSKPLKKQISGLIRRQREELLHPELA 1995

Query: 1795 S-------PGVMQTAANIHKVDAPLEFIKHVCAAFALDQNVQHDVLVMRKNLLKYVRVRE 1847
            S       PGV+ T  N  K +  LE +K +    +L +    +  ++R+ LL    VRE
Sbjct: 1996 SDYVFPILPGVL-TDPNEEKRNPVLELVKLLMQVLSLSKTTALETRLLRRELLALFEVRE 2054

Query: 1848 FAPEAEFRDPCPSFILPNVICSYCNDCRDLDLCRDMALL--------------AQDWHCA 1893
            F+ E  F +P  S  +P + CS C   RDLDLCRD  +L              ++ W C 
Sbjct: 2055 FSKEGRFENPGSSLKIPELTCSACCLIRDLDLCRDEDVLPERGSGSGPDSATSSRPWCC- 2113

Query: 1894 MPQCGQPYDREVMENALLQIVRQRERLYHLQDLVCIRCNQVKAAHLAEQCACAGSFRCKE 1953
             P C   YDR   E  L+  V      +  QDL C +C  +K +   E C+C+G +    
Sbjct: 2114 -PFCQTEYDRLAQEEMLIGQVWGMVVAWQTQDLKCSKCGTLKISEFMEHCSCSGQWTETM 2172

Query: 1954 DASDFRSKMQIFLNIANRQGFQLLQECTSWIL 1985
            + +D   ++++  ++A     +LLQ     +L
Sbjct: 2173 NRADIEKRLKVLESVAKFHELKLLQVVVEEVL 2204


>gi|303310761|ref|XP_003065392.1| DNA polymerase epsilon, catalytic subunit A, putative [Coccidioides
            posadasii C735 delta SOWgp]
 gi|240105054|gb|EER23247.1| DNA polymerase epsilon, catalytic subunit A, putative [Coccidioides
            posadasii C735 delta SOWgp]
          Length = 2223

 Score = 1379 bits (3568), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 701/1413 (49%), Positives = 938/1413 (66%), Gaps = 79/1413 (5%)

Query: 27   LEAKLGYDLFSEGDKRLGWLLTFASSSLEDEDTRKVYSCIDLYFVSQDGSTFKSKYKFRP 86
            ++  +G+  F  G KR+GWL    S+++ED       + ++ YF+  DG +FK+  ++ P
Sbjct: 53   IDESMGFPRFESGKKRIGWLCNMHSTTIEDPKVPGGRAGVEFYFLEDDGGSFKATVEYDP 112

Query: 87   YFYAATKEKMEMDVEAYLRRRYESQIADIEILEKEDLDLKNHLSGLHKSYLKISFDTVQQ 146
            YF  A K   EM+VE + RR++E  +   + LEKEDL + NHL G  + +L++SF  V  
Sbjct: 113  YFLIAAKRGYEMEVEEWCRRKFEGLVKSTKQLEKEDLQMPNHLLGNKRKFLQLSFANVND 172

Query: 147  LMDVKKDLLHVVERNQAKFDAAEAYESILTGKR----------EQRPQDFLDC---IVDL 193
            L+ V+K +L + E+N+   +A + Y  I +             ++    +L+    IVD+
Sbjct: 173  LLAVRKVILPIAEKNKKNVNAMDTYAEIASASAGFDMFDDEMADKTKNAYLEASEFIVDI 232

Query: 194  REYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLLEKRVDLLQRAEVHVCAFDIETTKLPL 253
            REYDVPYH+R +ID D+R G+WY V  +     L    + LQRA+  V AFDIETTKLPL
Sbjct: 233  REYDVPYHVRVSIDKDIRIGKWYTVDATHGAVSLTCIEERLQRADPVVLAFDIETTKLPL 292

Query: 254  KFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNVNNEIEL 313
            KFPD   D IMMISYM+DGQGYLI NRE V EDI + EYTPKPE++G F + N  +E   
Sbjct: 293  KFPDPVIDQIMMISYMIDGQGYLITNREIVSEDISNFEYTPKPEYQGPFTIFNEPSEKST 352

Query: 314  LRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDKNQGEC-RAKF 372
            +  +F H++E KP +  TYNGDYFDW F+E RA+  G  M  E+GF+  KN  +  ++ +
Sbjct: 353  IERFFQHVKEAKPTVIATYNGDYFDWSFVEARASVQGIDMYREIGFR--KNSEDIYQSDY 410

Query: 373  ACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQMMASYSVS 432
              H+DCFAWV RDSYLPQGS+GLKAVT AKLGYDP E++PE M R+A E+PQ +A YSVS
Sbjct: 411  CVHMDCFAWVNRDSYLPQGSRGLKAVTVAKLGYDPDELDPEVMTRYASERPQTLAEYSVS 470

Query: 433  DAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVICPNKHQ 492
            DAVATYYLYM Y+HPFIFSL TIIP++PD+VLRKG+GTLCEMLLMVQAYK N+I PNKH+
Sbjct: 471  DAVATYYLYMKYIHPFIFSLCTIIPLNPDDVLRKGTGTLCEMLLMVQAYKNNIILPNKHK 530

Query: 493  SDPEKFYRNHLLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQLLNNLDRDLQYAI 552
               E F+  HLL+SETY+GGHVE +E+GVFRSD+P +F +D +A ++LL +LD  L ++I
Sbjct: 531  DPIEAFWDGHLLDSETYVGGHVESIEAGVFRSDIPVNFSIDTTAIDELLRDLDAALTFSI 590

Query: 553  KVEGKMDLESVSNYDEVKNAIMEKLLRLQEEPIREECPLIYHLDVAAMYPNIILTNRLQP 612
             VE K  L+ ++NYD+VK  I ++L+ L+  P R E P IYHLDVA+MYPNI+ TNRLQP
Sbjct: 591  TVEEKKSLDDITNYDDVKAQISDRLMNLKNTPNRYERPSIYHLDVASMYPNIMTTNRLQP 650

Query: 613  PSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYYHLKKQIESE-FVDGTNGH 671
             S++ +  C  CDFNRPGKTC R+L W WRGE    KR +Y  +++ + +E F   T   
Sbjct: 651  DSMIKESDCAVCDFNRPGKTCDRRLPWAWRGEFLPAKRDEYNMIRRAVANEKFPGKTRDS 710

Query: 672  LSKSFLDLPKMEQQSRLKDRLKKYCQKAYKRVLDKPVTELREAGICMRENSFYVDTVRSF 731
              +SF DL + +Q   +K RL++YC+K Y ++ D    E REA IC REN FYVDTVR+F
Sbjct: 711  PLRSFDDLSESDQAKLVKSRLQEYCKKIYHKIHDSKTIE-REAIICQRENPFYVDTVRNF 769

Query: 732  RDRRYEYKGLNKVWKGKLSEAKASGNSI-KIQEAQDMVVLYDSLQLAHKCILNSFYGYVM 790
            RDRRY++KG  KVWKGK+   K SG +  +I+EA+ MVVL+DSLQLAHK ILNSFYGYVM
Sbjct: 770  RDRRYDFKGQQKVWKGKVDILKGSGATAPEIEEAKKMVVLFDSLQLAHKVILNSFYGYVM 829

Query: 791  RKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLPGSFPENFTFKT 850
            RKG+RWYSMEMAGV   TGA IIQ AR L+E+IG+PLELDTDGIWC+LP +FPENF F  
Sbjct: 830  RKGSRWYSMEMAGVTCLTGAHIIQMARELVERIGRPLELDTDGIWCMLPATFPENFAFTL 889

Query: 851  KDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEFEVDGPYKAMI 910
            K+  KK+ ISYPCVMLN  V    TN QYQTLVDP +  YETHS+ SI FEVDGPYKAMI
Sbjct: 890  KN-GKKIAISYPCVMLNHLVHGRFTNHQYQTLVDPTTFRYETHSDNSIFFEVDGPYKAMI 948

Query: 911  LPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFLHGSTIEE 970
            LP SKEE   +KKRYAVFN DG+LAELKGFE+KRRGELKLIK+FQ ++F  FL G+T+ E
Sbjct: 949  LPTSKEEDKNLKKRYAVFNHDGSLAELKGFEVKRRGELKLIKIFQTQIFKFFLEGTTLHE 1008

Query: 971  CYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLADYGEQKSCAVTTARRLS 1030
             YSAVA VANRWLD+L   G  +AD ELID I E+ +M+K+L +YG QKS ++TTARRL+
Sbjct: 1009 TYSAVAEVANRWLDVLHLHGSTLADEELIDLICENRSMTKTLEEYGSQKSTSITTARRLA 1068

Query: 1031 DFLGDTMVKDKGLRCQYIVACEPQGTPVSERAVPVAIFETDAEIMKFYLRKWCKTS-SDV 1089
            +FLGD MVKDKGL C+YI++  P+G+ ++ERAVPVAIF  +  + +F+LRKW K    D+
Sbjct: 1069 EFLGDQMVKDKGLNCKYIISAAPKGSSITERAVPVAIFSAEPNVKRFFLRKWLKEDPGDM 1128

Query: 1090 GIRSIVDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLYKKVREKEDKFRQRK 1149
              RSI+DW YY +RL S IQK+ITIPAA+QKV NPVPRV HPDWL +++  K+DKF+Q+K
Sbjct: 1129 DPRSIIDWEYYLERLGSVIQKLITIPAALQKVRNPVPRVPHPDWLQRRIDIKDDKFKQKK 1188

Query: 1150 LVDIFSSLKKDDFLNKTCNAETNLMDENVE---DLEDFPKKRRNSVNGPRPIVRCFEVNN 1206
            + D+F             +  TN+MD  +    D+ED                    ++ 
Sbjct: 1189 MTDLFDK-------TPLSSVSTNIMDHRLPTAGDIED-------------------AMST 1222

Query: 1207 EQKTVKTTDQVDSLRQQLEPSEVSDQQPSSQNAIDTENIDRIVDYKGWLELKKRKWK-DN 1265
            ++   + + Q+   R+  E S+ +D   S    + + N     DY+GWL+ +K+KWK   
Sbjct: 1223 QKLKTQISTQMSQKRKAPESSQSTDPFASLPAKMPSMN----EDYEGWLKYQKQKWKIQK 1278

Query: 1266 LDRRKKQKLGSLRASHQANGVSESLGDMINHKEAQRRTGVGSYFRRQETAMTRCHWQIIQ 1325
              R +++KL   R +   + +S                   ++FR Q        WQI+Q
Sbjct: 1279 HARLRRRKLFGERTNVATDALS-------------------NFFRNQAELTYVSTWQILQ 1319

Query: 1326 LVPSSQSGVFLAWVVVEGIMVRIPITVPRLFYLNSKDPI-----VEKFPGRRVNKTLPHG 1380
               +   G   A+V+++  +  I + VPR  ++N +D       +E    ++VN  LP+G
Sbjct: 1320 FRETDIPGEIRAFVLIDRKVHAITVKVPRQLFINFRDDQLPDVDIEGCTVQKVNHALPNG 1379

Query: 1381 RRSFNLIEVMIDEDQFRKESKKLAALLADPEVE 1413
              S +L ++ + E  + K+   ++ALL  P VE
Sbjct: 1380 HPSVHLFQLTMPEFTYVKDVATISALLDHPSVE 1412



 Score =  253 bits (647), Expect = 6e-64,   Method: Compositional matrix adjust.
 Identities = 168/624 (26%), Positives = 301/624 (48%), Gaps = 55/624 (8%)

Query: 1408 ADPEVEVLGWQQNAAKIGMQRCAASSQWFNERISLARYAHI------------------- 1448
            +D E+  LGWQ   AK  +    A   W +  I  ARY  I                   
Sbjct: 1608 SDNELPRLGWQPFVAKQIVMHYLALDSWISHLIEFARYGDIPLCNLERDDPKFLIDIAYA 1667

Query: 1449 ---------LWISDDGVPDLGGTSEED-ECFADEVHQPVLTYPGAYRKVSVELKIHHLSV 1498
                     LW S + +PD  G  +++      +V  P +  PGAY  V ++L + +L++
Sbjct: 1668 RRLEQNNVVLWWSPNPLPDHAGYEKDNINSLIQKVDMPTINNPGAYSSVCIDLDVRNLAI 1727

Query: 1499 NALLKSNQVNEMEGGGLFGFDQDMNSGPYNNELCG--FDETTSSAPAFRVVKQLIQRCLT 1556
            N +L S+ +N++EG      +    +G   ++  G  + +T  S+    V++ +++    
Sbjct: 1728 NTILTSSLINDLEGSESVLLNPSAPTGQEVSDGTGVLYSDTAFSSAGIVVLRDMVKAWWA 1787

Query: 1557 DAVTSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEFRKLGATII 1616
            +A   G V AD ++QHL RW+ SP   L+D  LH+ +  + +K    L+ +FR++G+++I
Sbjct: 1788 EAC-QGKVMADVMVQHLIRWVESPDCNLYDRALHQYVQMMSKKALQQLMGDFRRVGSSVI 1846

Query: 1617 FANFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLFMDQYNYGG 1676
            FA+ +++++ T K ++  A AY   +LK+++++ LF +++LE   +W  LL+ D++NYGG
Sbjct: 1847 FASPNRLLLQTTKTEVGNAYAYSQYILKSIKSKPLFNFLDLEIKEYWEYLLWYDEFNYGG 1906

Query: 1677 IPARADESLDDDSQ-VDIVSSWNIAEYLPKEIQDHFVLVVSEFMYIPWKHAQKLAASRAS 1735
                  E ++ +SQ ++ +  W +  +LP  +Q  F   V E++ I       L  S  S
Sbjct: 1907 --KACHEVVESNSQELETIMHWQMGGFLPSPLQPVFNDWVVEYIEI----MHGLKKSNKS 1960

Query: 1736 LQEGSSCTPSITVAAAENFESHIVQYVKGE-ISSYFTGKLLSIV---RDAIHHMKKMNN- 1790
            L    S    I   +    E   V  V  E  S     +++ ++   RD + H + +++ 
Sbjct: 1961 LDSDESRPTQIQFKSMTETEGIDVTNVLSESYSKALKRQIVGLIRRQRDEMLHPELVSDY 2020

Query: 1791 DQHNSPGVMQTAANIHKVDAPLEFIKHVCAAFALDQNVQHDVLVMRKNLLKYVRVREFAP 1850
            D    PG         + +  LE +K++    +L ++   +V ++R+ LL    ++EF+ 
Sbjct: 2021 DFPTLPGAFWHDTKRER-NPTLELVKYLTHVLSLSKHTSLEVRILRRELLALFDIKEFSD 2079

Query: 1851 EAEFRDPCPSFILPNVICSYCNDCRDLDLCRDMALLAQD--------WHCAMPQCGQPYD 1902
              +F +P  S  LP +IC++C   RDLDLCRD  LL ++        W C    CG  YD
Sbjct: 2080 AGKFENPSASLKLPQLICNHCTMSRDLDLCRDGDLLPEEGGSAASKAWCCLY--CGTEYD 2137

Query: 1903 REVMENALLQIVRQRERLYHLQDLVCIRCNQVKAAHLAEQCACAGSFRCKEDASDFRSKM 1962
            R  +E  ++  V+     +  QDL C +C  +    L E C+C G +    D      K+
Sbjct: 2138 RLALEERMIGEVQGIVVEWQTQDLKCEKCGGLMVNPLMEHCSCGGRWTTMLDRRAAERKV 2197

Query: 1963 QIFLNIANRQGFQLLQECTSWILE 1986
            +IF ++A   G ++L   T+ +L+
Sbjct: 2198 RIFKSVAEFYGLKMLTIVTNGVLD 2221


>gi|320034737|gb|EFW16680.1| DNA polymerase epsilon catalytic subunit A [Coccidioides posadasii
            str. Silveira]
          Length = 2223

 Score = 1378 bits (3567), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 701/1413 (49%), Positives = 938/1413 (66%), Gaps = 79/1413 (5%)

Query: 27   LEAKLGYDLFSEGDKRLGWLLTFASSSLEDEDTRKVYSCIDLYFVSQDGSTFKSKYKFRP 86
            ++  +G+  F  G KR+GWL    S+++ED       + ++ YF+  DG +FK+  ++ P
Sbjct: 53   IDESMGFPRFESGKKRIGWLCNMHSTTIEDPKVPGGRAGVEFYFLEDDGGSFKATVEYDP 112

Query: 87   YFYAATKEKMEMDVEAYLRRRYESQIADIEILEKEDLDLKNHLSGLHKSYLKISFDTVQQ 146
            YF  A K   EM+VE + RR++E  +   + LEKEDL + NHL G  + +L++SF  V  
Sbjct: 113  YFLIAAKRGYEMEVEEWCRRKFEGLVKSTKQLEKEDLQMPNHLLGNKRKFLQLSFANVND 172

Query: 147  LMDVKKDLLHVVERNQAKFDAAEAYESILTGKR----------EQRPQDFLDC---IVDL 193
            L+ V+K +L + E+N+   +A + Y  I +             ++    +L+    IVD+
Sbjct: 173  LLAVRKVILPIAEKNKKNVNAMDTYAEIASASAGFDMFDDEMADKTKNAYLEASEFIVDI 232

Query: 194  REYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLLEKRVDLLQRAEVHVCAFDIETTKLPL 253
            REYDVPYH+R +ID D+R G+WY V  +     L    + LQRA+  V AFDIETTKLPL
Sbjct: 233  REYDVPYHVRVSIDKDIRIGKWYTVDATHGAVSLTCIEERLQRADPVVLAFDIETTKLPL 292

Query: 254  KFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNVNNEIEL 313
            KFPD   D IMMISYM+DGQGYLI NRE V EDI + EYTPKPE++G F + N  +E   
Sbjct: 293  KFPDPVIDQIMMISYMIDGQGYLITNREIVSEDISNFEYTPKPEYQGPFTIFNEPSEKST 352

Query: 314  LRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDKNQGEC-RAKF 372
            +  +F H++E KP +  TYNGDYFDW F+E RA+  G  M  E+GF+  KN  +  ++ +
Sbjct: 353  IERFFQHVKEAKPTVIATYNGDYFDWSFVEARASVQGIDMYREIGFR--KNSEDIYQSDY 410

Query: 373  ACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQMMASYSVS 432
              H+DCFAWV RDSYLPQGS+GLKAVT AKLGYDP E++PE M R+A E+PQ +A YSVS
Sbjct: 411  CVHMDCFAWVNRDSYLPQGSRGLKAVTVAKLGYDPDELDPEVMTRYASERPQTLAEYSVS 470

Query: 433  DAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVICPNKHQ 492
            DAVATYYLYM Y+HPFIFSL TIIP++PD+VLRKG+GTLCEMLLMVQAYK N+I PNKH+
Sbjct: 471  DAVATYYLYMKYIHPFIFSLCTIIPLNPDDVLRKGTGTLCEMLLMVQAYKNNIILPNKHK 530

Query: 493  SDPEKFYRNHLLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQLLNNLDRDLQYAI 552
               E F+  HLL+SETY+GGHVE +E+GVFRSD+P +F +D +A ++LL +LD  L ++I
Sbjct: 531  DPIEAFWDGHLLDSETYVGGHVESIEAGVFRSDIPVNFSIDTTAIDELLRDLDAALTFSI 590

Query: 553  KVEGKMDLESVSNYDEVKNAIMEKLLRLQEEPIREECPLIYHLDVAAMYPNIILTNRLQP 612
             VE K  L+ ++NYD+VK  I ++L+ L+  P R E P IYHLDVA+MYPNI+ TNRLQP
Sbjct: 591  TVEEKKSLDDITNYDDVKAQISDRLMNLKNTPNRYERPSIYHLDVASMYPNIMTTNRLQP 650

Query: 613  PSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYYHLKKQIESE-FVDGTNGH 671
             S++ +  C  CDFNRPGKTC R+L W WRGE    KR +Y  +++ + +E F   T   
Sbjct: 651  DSMIKESDCAVCDFNRPGKTCDRRLPWAWRGEFLPAKRDEYNMIRRAVANEKFPGKTRDS 710

Query: 672  LSKSFLDLPKMEQQSRLKDRLKKYCQKAYKRVLDKPVTELREAGICMRENSFYVDTVRSF 731
              +SF DL + +Q   +K RL++YC+K Y ++ D    E REA IC REN FYVDTVR+F
Sbjct: 711  PLRSFDDLSESDQAKLVKSRLQEYCKKIYHKIHDSKTIE-REAIICQRENPFYVDTVRNF 769

Query: 732  RDRRYEYKGLNKVWKGKLSEAKASGNSI-KIQEAQDMVVLYDSLQLAHKCILNSFYGYVM 790
            RDRRY++KG  KVWKGK+   K SG +  +I+EA+ MVVL+DSLQLAHK ILNSFYGYVM
Sbjct: 770  RDRRYDFKGQQKVWKGKVDILKGSGATAPEIEEAKKMVVLFDSLQLAHKVILNSFYGYVM 829

Query: 791  RKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLPGSFPENFTFKT 850
            RKG+RWYSMEMAGV   TGA IIQ AR L+E+IG+PLELDTDGIWC+LP +FPENF F  
Sbjct: 830  RKGSRWYSMEMAGVTCLTGAHIIQMARELVERIGRPLELDTDGIWCMLPATFPENFAFTL 889

Query: 851  KDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEFEVDGPYKAMI 910
            K+  KK+ ISYPCVMLN  V    TN QYQTLVDP +  YETHS+ SI FEVDGPYKAMI
Sbjct: 890  KN-GKKIAISYPCVMLNHLVHGRFTNHQYQTLVDPTTFRYETHSDNSIFFEVDGPYKAMI 948

Query: 911  LPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFLHGSTIEE 970
            LP SKEE   +KKRYAVFN DG+LAELKGFE+KRRGELKLIK+FQ ++F  FL G+T+ E
Sbjct: 949  LPTSKEEDKNLKKRYAVFNHDGSLAELKGFEVKRRGELKLIKIFQTQIFKFFLEGTTLHE 1008

Query: 971  CYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLADYGEQKSCAVTTARRLS 1030
             YSAVA VANRWLD+L   G  +AD ELID I E+ +M+K+L +YG QKS ++TTARRL+
Sbjct: 1009 TYSAVAEVANRWLDVLHLHGSTLADEELIDLICENRSMTKTLEEYGRQKSTSITTARRLA 1068

Query: 1031 DFLGDTMVKDKGLRCQYIVACEPQGTPVSERAVPVAIFETDAEIMKFYLRKWCKTS-SDV 1089
            +FLGD MVKDKGL C+YI++  P+G+ ++ERAVPVAIF  +  + +F+LRKW K    D+
Sbjct: 1069 EFLGDQMVKDKGLNCKYIISAAPKGSSITERAVPVAIFSAEPNVKRFFLRKWLKEDPGDM 1128

Query: 1090 GIRSIVDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLYKKVREKEDKFRQRK 1149
              RSI+DW YY +RL S IQK+ITIPAA+QKV NPVPRV HPDWL +++  K+DKF+Q+K
Sbjct: 1129 DPRSIIDWEYYLERLGSVIQKLITIPAALQKVRNPVPRVPHPDWLQRRIDIKDDKFKQKK 1188

Query: 1150 LVDIFSSLKKDDFLNKTCNAETNLMDENVE---DLEDFPKKRRNSVNGPRPIVRCFEVNN 1206
            + D+F             +  TN+MD  +    D+ED                    ++ 
Sbjct: 1189 MTDLFDK-------TPLSSVSTNIMDHRLPTAGDIED-------------------AMST 1222

Query: 1207 EQKTVKTTDQVDSLRQQLEPSEVSDQQPSSQNAIDTENIDRIVDYKGWLELKKRKWK-DN 1265
            ++   + + Q+   R+  E S+ +D   S    + + N     DY+GWL+ +K+KWK   
Sbjct: 1223 QKLKTQISTQMSQKRKAPESSQSTDPFASLPAKMPSMN----EDYEGWLKYQKQKWKIQK 1278

Query: 1266 LDRRKKQKLGSLRASHQANGVSESLGDMINHKEAQRRTGVGSYFRRQETAMTRCHWQIIQ 1325
              R +++KL   R +   + +S                   ++FR Q        WQI+Q
Sbjct: 1279 HARLRRRKLFGERTNVATDALS-------------------NFFRNQAELTYVSTWQILQ 1319

Query: 1326 LVPSSQSGVFLAWVVVEGIMVRIPITVPRLFYLNSKDPI-----VEKFPGRRVNKTLPHG 1380
               +   G   A+V+++  +  I + VPR  ++N +D       +E    ++VN  LP+G
Sbjct: 1320 FRETDIPGEIRAFVLIDRKVHAITVKVPRQLFINFRDDQLPDVDIEGCTVQKVNHALPNG 1379

Query: 1381 RRSFNLIEVMIDEDQFRKESKKLAALLADPEVE 1413
              S +L ++ + E  + K+   ++ALL  P VE
Sbjct: 1380 HPSVHLFQLTMPEFTYVKDVATISALLDHPSVE 1412



 Score =  253 bits (647), Expect = 6e-64,   Method: Compositional matrix adjust.
 Identities = 168/624 (26%), Positives = 301/624 (48%), Gaps = 55/624 (8%)

Query: 1408 ADPEVEVLGWQQNAAKIGMQRCAASSQWFNERISLARYAHI------------------- 1448
            +D E+  LGWQ   AK  +    A   W +  I  ARY  I                   
Sbjct: 1608 SDNELPRLGWQPFVAKQIVMHYLALDSWISHLIEFARYGDIPLCNLERDDPKFLIDIAYA 1667

Query: 1449 ---------LWISDDGVPDLGGTSEED-ECFADEVHQPVLTYPGAYRKVSVELKIHHLSV 1498
                     LW S + +PD  G  +++      +V  P +  PGAY  V ++L + +L++
Sbjct: 1668 RRLEQNNVVLWWSPNPLPDHAGYEKDNINSLIQKVDMPTINNPGAYSSVCIDLDVRNLAI 1727

Query: 1499 NALLKSNQVNEMEGGGLFGFDQDMNSGPYNNELCG--FDETTSSAPAFRVVKQLIQRCLT 1556
            N +L S+ +N++EG      +    +G   ++  G  + +T  S+    V++ +++    
Sbjct: 1728 NTILTSSLINDLEGSESVLLNPSAPTGQEVSDGTGVLYSDTAFSSAGIVVLRDMVKAWWA 1787

Query: 1557 DAVTSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEFRKLGATII 1616
            +A   G V AD ++QHL RW+ SP   L+D  LH+ +  + +K    L+ +FR++G+++I
Sbjct: 1788 EAC-QGKVMADVMVQHLIRWVESPDCNLYDRALHQYVQMMSKKALQQLMGDFRRVGSSVI 1846

Query: 1617 FANFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLFMDQYNYGG 1676
            FA+ +++++ T K ++  A AY   +LK+++++ LF +++LE   +W  LL+ D++NYGG
Sbjct: 1847 FASPNRLLLQTTKTEVGNAYAYSQYILKSIKSKPLFNFLDLEIKEYWEYLLWYDEFNYGG 1906

Query: 1677 IPARADESLDDDSQ-VDIVSSWNIAEYLPKEIQDHFVLVVSEFMYIPWKHAQKLAASRAS 1735
                  E ++ +SQ ++ +  W +  +LP  +Q  F   V E++ I       L  S  S
Sbjct: 1907 --KACHEVVESNSQELETIMHWQMGGFLPSPLQPVFNDWVVEYIEI----MHGLKKSNKS 1960

Query: 1736 LQEGSSCTPSITVAAAENFESHIVQYVKGE-ISSYFTGKLLSIV---RDAIHHMKKMNN- 1790
            L    S    I   +    E   V  V  E  S     +++ ++   RD + H + +++ 
Sbjct: 1961 LDSDESRPTQIQFKSMTETEGIDVTNVLSESYSKALKRQIVGLIRRQRDEMLHPELVSDY 2020

Query: 1791 DQHNSPGVMQTAANIHKVDAPLEFIKHVCAAFALDQNVQHDVLVMRKNLLKYVRVREFAP 1850
            D    PG         + +  LE +K++    +L ++   +V ++R+ LL    ++EF+ 
Sbjct: 2021 DFPTLPGAFWHDTKRER-NPTLELVKYLTHVLSLSKHTSLEVRILRRELLALFDIKEFSD 2079

Query: 1851 EAEFRDPCPSFILPNVICSYCNDCRDLDLCRDMALLAQD--------WHCAMPQCGQPYD 1902
              +F +P  S  LP +IC++C   RDLDLCRD  LL ++        W C    CG  YD
Sbjct: 2080 AGKFENPSASLKLPQLICNHCTMSRDLDLCRDGDLLPEEGGSAASKAWCCLY--CGTEYD 2137

Query: 1903 REVMENALLQIVRQRERLYHLQDLVCIRCNQVKAAHLAEQCACAGSFRCKEDASDFRSKM 1962
            R  +E  ++  V+     +  QDL C +C  +    L E C+C G +    D      K+
Sbjct: 2138 RLALEERMIGEVQGIVVEWQTQDLKCEKCGGLMVNPLMEHCSCGGRWTTMLDRRAAERKV 2197

Query: 1963 QIFLNIANRQGFQLLQECTSWILE 1986
            +IF ++A   G ++L   T+ +L+
Sbjct: 2198 RIFKSVAEFYGLKMLTIVTNGVLD 2221


>gi|358368302|dbj|GAA84919.1| DNA polymerase epsilon, catalytic subunit A/POL2 [Aspergillus
            kawachii IFO 4308]
          Length = 2233

 Score = 1378 bits (3566), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 702/1414 (49%), Positives = 951/1414 (67%), Gaps = 70/1414 (4%)

Query: 27   LEAKLGYDLFSEGDKRLGWLLTFASSSLEDEDTRKVYSCIDLYFVSQDGSTFKSKYKFRP 86
            ++  LG+  F  G+KR+GWL+   S+S+ED +     + +D YF+   G +FK+  ++ P
Sbjct: 54   IDESLGFPRFESGEKRVGWLINMHSTSIEDPNVPGGRAGVDYYFLEDGGGSFKATVEYDP 113

Query: 87   YFYAATKEKMEMDVEAYLRRRYESQIADIEILEKEDLDLKNHLSGLHKSYLKISFDTVQQ 146
            YF  A K+  E +VE + RR +E  I  I  +EKEDL L NHL G  +++L+++F +V  
Sbjct: 114  YFLIAVKKGRETEVEDWCRRAFEGLIKKITRVEKEDLKLPNHLLGYKRTFLQLNFASVSH 173

Query: 147  LMDVKKDLLHVVERNQAKFDAAEAY--------------ESILTGKREQRPQDFLDCIVD 192
            L++V+K LL + E+N+   +  + Y              + ++   R     +  D I+D
Sbjct: 174  LLEVRKTLLPLAEKNKKNVNVMDTYMEISSANAGFDLFDDELINESRSNATMNASDFIID 233

Query: 193  LREYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLLEKRVDLLQRAEVHVCAFDIETTKLP 252
            +REYDVPYH+R +ID D+R G+WY V        L    + L RA+  V AFDIETTKLP
Sbjct: 234  IREYDVPYHVRVSIDKDIRIGKWYTVEAKHGVISLTCIEERLTRADPVVLAFDIETTKLP 293

Query: 253  LKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNVNNEIE 312
            LKFPD+  D IMMISYM+DGQG+LI NRE V EDI D EYTPKPE+ G F + N  +E  
Sbjct: 294  LKFPDSVIDQIMMISYMIDGQGFLITNREIVSEDINDFEYTPKPEYSGPFMIFNEPDERG 353

Query: 313  LLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDKNQGECRAKF 372
            +L  +F H++E KP +  TYNGD+FDWPF+E RA+  G  M  E+GF+  KN  +     
Sbjct: 354  VLERFFEHIKEAKPTVIATYNGDFFDWPFVEARASVLGIDMYREIGFR--KNSEDIYQSD 411

Query: 373  AC-HLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQMMASYSV 431
             C H+DCFAWV RDSYLPQGS+GLKAVT AKLGYDP E++PE M  +A E+PQ +A YSV
Sbjct: 412  HCVHMDCFAWVNRDSYLPQGSRGLKAVTVAKLGYDPDELDPELMTPYASERPQTLAEYSV 471

Query: 432  SDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVICPNKH 491
            SDAVATYYLYM YVHPFIFSL TI+P++PD+ LRKG+GTLCEMLLMVQAY+ N++ PNKH
Sbjct: 472  SDAVATYYLYMKYVHPFIFSLCTILPINPDDTLRKGTGTLCEMLLMVQAYQGNIVLPNKH 531

Query: 492  QSDPEKFYRNHLLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQLLNNLDRDLQYA 551
            +  PE FY  HLLESETY+GGHVE +E+GVFRSD+P +F + PSA ++LL +LD  L+++
Sbjct: 532  KDPPESFYEGHLLESETYVGGHVESIEAGVFRSDIPVTFNVQPSAIDELLRDLDAALKFS 591

Query: 552  IKVEGKMDLESVSNYDEVKNAIMEKLLRLQEEPIREECPLIYHLDVAAMYPNIILTNRLQ 611
            I+VE K  ++ V+NY+EVK  I +KL+ L+E P R+E P IYHLDVA+MYPNI++TNRLQ
Sbjct: 592  IEVEEKKSMDDVTNYEEVKKQIADKLIDLKERPHRDEVPFIYHLDVASMYPNIMITNRLQ 651

Query: 612  PPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYYHLKKQIESEFVDGTNGH 671
            P S++ +  C ACDFNRPGK+C R++ W WRGE    KR +Y  +++ + +E   G + +
Sbjct: 652  PDSMIQESNCAACDFNRPGKSCDRRMPWAWRGEFLPAKRDEYNMIRQAVANERFPGKHKN 711

Query: 672  LS-KSFLDLPKMEQQSRLKDRLKKYCQKAYKRVLDKPVTELREAGICMRENSFYVDTVRS 730
               +SF D+   EQ   +K RL+ Y +K Y ++ D   T +REA IC REN FYVDTVRS
Sbjct: 712  SPMRSFGDMSIEEQAGIVKKRLQDYSKKIYHKIHDSK-TMVREAIICQRENPFYVDTVRS 770

Query: 731  FRDRRYEYKGLNKVWKGKLSEAKASGNS-IKIQEAQDMVVLYDSLQLAHKCILNSFYGYV 789
            FRDRRY++KG  KVWKGK    K+SG S  +++EA+ M+VLYDSLQLAHK ILNSFYGYV
Sbjct: 771  FRDRRYDFKGKQKVWKGKTDALKSSGASAAEVEEAKKMIVLYDSLQLAHKVILNSFYGYV 830

Query: 790  MRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLPGSFPENFTFK 849
            MRKG+RWYSMEMAGV   TGA+IIQ AR L+E+IG+PLELDTDGIWC+LPGSFPENF+F 
Sbjct: 831  MRKGSRWYSMEMAGVTCLTGARIIQMARELVERIGRPLELDTDGIWCMLPGSFPENFSFT 890

Query: 850  TKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEFEVDGPYKAM 909
             K+  KKL ISYPCVMLN  V  + TN QYQTLVDP +  Y+ +SE SI FEVDGPY+AM
Sbjct: 891  LKN-GKKLGISYPCVMLNHLVHGSYTNHQYQTLVDPATFRYDRNSENSIFFEVDGPYRAM 949

Query: 910  ILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFLHGSTIE 969
            ILP SKEE   +KKRYAVFN DG+LAELKGFE+KRRGELKLIK+FQ ++F  FL G+ + 
Sbjct: 950  ILPTSKEEDKNLKKRYAVFNHDGSLAELKGFEVKRRGELKLIKIFQTQIFRFFLEGTNLT 1009

Query: 970  ECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLADYGEQKSCAVTTARRL 1029
            E Y+AVA VA+RWLD+L   G  +AD ELID ISE+ +M+K+L +YG QKS ++TTARRL
Sbjct: 1010 ETYAAVAKVADRWLDVLYEHGATLADEELIDLISENRSMTKTLEEYGNQKSTSITTARRL 1069

Query: 1030 SDFLGDTMVKDKGLRCQYIVACEPQGTPVSERAVPVAIFETDAEIMKFYLRKWCKTS-SD 1088
            ++FLG+ MVKDKGL C+YI++ +P+ TPV+ERA+PVAIF  +  + +F+LRKW K    D
Sbjct: 1070 AEFLGEQMVKDKGLNCKYIISSKPRNTPVTERAIPVAIFSAEENVKRFFLRKWLKDDPGD 1129

Query: 1089 VGIRSIVDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLYKKVREKEDKFRQR 1148
            +  R+++DW YY +RL S +QK+ITIPAA+QK+ NPVPRV HPDWL +++  K+D+F+Q 
Sbjct: 1130 MDPRTVIDWDYYLERLGSVVQKLITIPAALQKIRNPVPRVAHPDWLQRRINTKDDRFKQT 1189

Query: 1149 KLVDIFSSLKKDDFLNKTCNAETNLMDENVEDLEDFPKKRRNSVNGPRPIVRCFEVNNEQ 1208
            K+ D+F    K +  N   +  TN++D  V+   D  +   NS    +P       ++E 
Sbjct: 1190 KMTDMFIKSDKQE-KNPLTDISTNILDHRVQHTGDLDEALANSTQKLKP-------SSET 1241

Query: 1209 KTVKTTDQVDSL-RQQLEP-SEVSDQQPSSQNAIDTENIDRIVDYKGWLELKKRKWKDNL 1266
            K  +     + L +  L+P + +  + PS  +           DY G+L+ +K+KWK   
Sbjct: 1242 KVSQKRKHPEGLSKTSLDPFATLPAKMPSMAD-----------DYVGFLKYQKQKWKIQK 1290

Query: 1267 DR--RKKQKLGSLRASHQANGVSESLGDMINHKEAQRRTGVGSYFRRQETAMTRCHWQII 1324
                R++Q  G      +AN   +SL ++               FR Q   +    WQI+
Sbjct: 1291 QARIRRRQLFG-----ERANAGGDSLSNL---------------FRNQAELLYINTWQIL 1330

Query: 1325 QLVPSSQSGVFLAWVVVEGIMVRIPITVPRLFYLNSK-----DPIVEKFPGRRVNKTLPH 1379
            QL  + + G+  A+V+++  +  + + VPR  Y+N K     D  V      +VN TLP+
Sbjct: 1331 QLSETGRPGIVRAFVLIDRKIHALTVKVPRQIYVNLKQDSLPDVDVPDCEVEKVNHTLPN 1390

Query: 1380 GRRSFNLIEVMIDEDQFRKESKKLAALLADPEVE 1413
            G  S +L ++ + E+ +  E++K+  L   P VE
Sbjct: 1391 GHPSVHLFKLTLSEETYLSEAEKIDVLFQHPSVE 1424



 Score =  238 bits (607), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 177/630 (28%), Positives = 294/630 (46%), Gaps = 69/630 (10%)

Query: 1407 LADPEVEVLGWQQNAAKIGMQRCAASSQWFNERISLARYAHI------------------ 1448
            ++D ++  LGWQ   A+  +      S W      LARY  +                  
Sbjct: 1619 VSDMDLPPLGWQSFIARRLVTHYLYLSAWIQHLTLLARYGDVPLCNLENDDPRFLIDISY 1678

Query: 1449 ----------LWISDDGVPDLGGTSEED-ECFADEVHQPVLTYPGAYRKVSVELKIHHLS 1497
                      LW S +  PD  G  ++D     ++V  P +  P AY  V +EL++ +L+
Sbjct: 1679 ARRLQQNNVVLWWSSNPRPDHAGYEKDDISGPLEKVSMPSVNVPSAYTTVCIELEVRNLA 1738

Query: 1498 VNALLKSNQVNEMEGGGLFGFDQDMNSGPYNNELCGFDETTSSAPAFRVVKQLIQRCLTD 1557
            +N +L S+ +NEMEG          ++ P    +   ++  +SA A  V++++++   T+
Sbjct: 1739 INTILTSSIINEMEGADTLLASSGQSADPNGGGVLYSEKAFASAGAV-VLREMVKHWWTE 1797

Query: 1558 AVTSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEFRKLGATIIF 1617
            A   GN  AD ++QHL RW+ SP S L+D  LH  +  + +K F  L+AEFR++G+ +IF
Sbjct: 1798 AC-DGNSMADIMVQHLIRWVESPVSCLYDRSLHHYVRMLSRKSFQRLMAEFRRVGSNVIF 1856

Query: 1618 ANFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLFMDQYNYGGI 1677
            A+ +++++ T K ++  A AY   +LK+++    F +I+LE   +W  LL+ D+YNYGG 
Sbjct: 1857 ASSTRLLLQTSKTEVGNAYAYSQYVLKSIRANPSFHFIDLEIKEYWDYLLWYDEYNYGG- 1915

Query: 1678 PARADESLDDDSQ-VDIVSSWNIAEYLPKEIQDHFVLVVSEFMYIPWKHAQKLAASRAS- 1735
                 E ++ D Q ++ V  W +   LP  +Q  F   V E  YI   H  K   +  S 
Sbjct: 1916 -KGCQEVVESDEQELETVMHWQLNRTLPTPMQTIFHDWVVE--YIELMHGLKRPDTNDST 1972

Query: 1736 --LQEGSSCTPS------ITVAAAENFESHIVQYVKGEISSYFTGKLLSIVRDAIHHMKK 1787
              L +     PS      ++ A AE F   + + + G         L+   RD + H + 
Sbjct: 1973 PRLTQIPIGRPSDEDSQEVSAALAEKFSKPLKKQITG---------LIRRQRDELLHPEL 2023

Query: 1788 MNNDQHNS-PGVMQTAANIHKVDAPLEFIKHVCAAFALDQNVQHDVLVMRKNLLKYVRVR 1846
             ++      PGV+ +  N  K +  LE +K +    +L +    +  ++R+ LL    VR
Sbjct: 2024 ASDYIFPVLPGVL-SDPNEEKRNPVLELVKLLMQVLSLSKMTTMETRLLRRELLALFEVR 2082

Query: 1847 EFAPEAEFRDPCPSFILPNVICSYCNDCRDLDLCRDMALL-----------AQDWHCAMP 1895
            EF+ E  F +P  S  +P + C  C   RDLDLCRD  +L            + W C  P
Sbjct: 2083 EFSKEGRFENPGASLKIPELTCGSCCLIRDLDLCRDEDVLPEPGVDAGKTSTKPWRC--P 2140

Query: 1896 QCGQPYDREVMENALLQIVRQRERLYHLQDLVCIRCNQVKAAHLAEQCACAGSFRCKEDA 1955
             C   YDR   E  L+  ++     +  QDL C +C  +K +   E C+C+G +    D 
Sbjct: 2141 FCQTEYDRLAQEEILIGQIQGYIVGWQTQDLKCSKCGTLKVSDFMEHCSCSGVWVETMDR 2200

Query: 1956 SDFRSKMQIFLNIANRQGFQLLQECTSWIL 1985
             +   K+Q+  ++A   G +LL+     +L
Sbjct: 2201 KEIERKLQVLNSVAKFHGLKLLESVVGEVL 2230


>gi|255934434|ref|XP_002558396.1| Pc12g15980 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211583015|emb|CAP81225.1| Pc12g15980 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 2203

 Score = 1378 bits (3566), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 709/1398 (50%), Positives = 937/1398 (67%), Gaps = 67/1398 (4%)

Query: 27   LEAKLGYDLFSEGDKRLGWLLTFASSSLEDEDTRKVYSCIDLYFVSQDGSTFKSKYKFRP 86
            ++  LG+  F  G+ R+GWL+   S+S+ED D     + +D YF+  DG +FK+  ++ P
Sbjct: 54   IDETLGFPRFESGETRVGWLVNMHSTSIEDSDVPGGRAGVDFYFLQDDGGSFKATVEYDP 113

Query: 87   YFYAATKEKMEMDVEAYLRRRYESQIADIEILEKEDLDLKNHLSGLHKSYLKISFDTVQQ 146
            YF  A K+  EM+VE + RR +E  I   + LEKEDL L NHL G  K+Y+K+SF  V  
Sbjct: 114  YFLIAVKKGYEMEVEEWCRRTFEGMIKKFKRLEKEDLKLPNHLLGYRKTYIKLSFANVSN 173

Query: 147  LMDVKKDLLHVVERNQAKFDAAEAYESILTGKREQRPQDFLDCIVDLREYDVPYHIRFAI 206
            L++V++ LL + E+N+    A +AY  + +           D IVD+REYDVPYH+R  I
Sbjct: 174  LLEVRRTLLPLAEKNKKNESAMDAYVEMTS-----------DFIVDIREYDVPYHVRVCI 222

Query: 207  DNDVRCGQWYDVSISSTGPLLEKRVDLLQRAEVHVCAFDIETTKLPLKFPDADYDIIMMI 266
            D D+R G+WY+V        L    D LQRA+  V AFDIE TKLPLKFPDA  D IMMI
Sbjct: 223  DKDIRIGKWYNVEADHGVISLTCLEDRLQRADPVVLAFDIECTKLPLKFPDAATDQIMMI 282

Query: 267  SYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNVNNEIELLRLWFAHMQEVKP 326
            SYM+DGQG+LI NRE V EDI D EYTPKPE+ G F + N  NE  +L  +F H++  KP
Sbjct: 283  SYMIDGQGFLITNREIVSEDIHDFEYTPKPEYNGPFIIFNEPNERGVLERFFEHIKISKP 342

Query: 327  GIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDKNQGECRAKFAC-HLDCFAWVKRD 385
             +  TYNGD+FDWPF+ETRA+  G  M  E+GF+  KN  +      C H+DCFAWV RD
Sbjct: 343  TVIATYNGDFFDWPFVETRASILGLDMYMEIGFR--KNSEDIYQADNCVHMDCFAWVNRD 400

Query: 386  SYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQMMASYSVSDAVATYYLYMTYV 445
            SYLPQGS+GLKAVT AKLGYDP E++PE M  +A E+PQ +A YSVSDAVATYYLYM YV
Sbjct: 401  SYLPQGSRGLKAVTVAKLGYDPDELDPELMTPYASERPQTLAEYSVSDAVATYYLYMKYV 460

Query: 446  HPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVICPNKHQSDPEKFYRNHLLE 505
            HPFIFSL TIIP++PDE LRKG+GTLCEMLLMVQAY+  ++ PNKH++ PE FY  HLLE
Sbjct: 461  HPFIFSLCTIIPLNPDETLRKGTGTLCEMLLMVQAYQHEIVLPNKHKNPPEAFYEGHLLE 520

Query: 506  SETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQLLNNLDRDLQYAIKVEGKMDLESVSN 565
            SETY+GGHVE +E+GVFRSD+PT F +DP+A ++LL +LD  L+++I+VE K  ++ V N
Sbjct: 521  SETYVGGHVESIEAGVFRSDIPTHFTVDPTAIDELLKDLDHALKFSIEVEEKKSMDDVVN 580

Query: 566  YDEVKNAIMEKLLRLQEEPIREECPLIYHLDVAAMYPNIILTNRLQPPSIVTDEVCTACD 625
            YDEVK  I+E+LL L+  P+R E P IYHLDVA+MYPNI++TNRLQP S++ +  C ACD
Sbjct: 581  YDEVKAQIVERLLDLKNNPVRNEVPFIYHLDVASMYPNIMITNRLQPDSLIDESNCAACD 640

Query: 626  FNRPGKTCLRKLEWVWRGEIFMGKRSDYYHLKKQIESEFVDGTNGHLS-KSFLDLPKMEQ 684
            FNRPGKTC R++ W WRGE    KR +Y  +++   +E   G +     +SF +L   EQ
Sbjct: 641  FNRPGKTCDRRMPWAWRGEFLPAKRDEYNMIRRATANERFPGRHPKSPMRSFNELSTEEQ 700

Query: 685  QSRLKDRLKKYCQKAYKRVLDKPVTELREAGICMRENSFYVDTVRSFRDRRYEYKGLNKV 744
             + +K RL+ Y +K Y ++ D    E REA IC REN FYVDTVR+FRDRRY++KG  K 
Sbjct: 701  AAVVKKRLQDYSKKIYHKIHDSKTME-REAIICQRENPFYVDTVRAFRDRRYDFKGKQKS 759

Query: 745  WKGKLSEAKASGNS-IKIQEAQDMVVLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAG 803
            WK K    ++SG S  +I EA+ M++L+DSLQLAHK ILNSFYGYVMRKG+RWYSMEMAG
Sbjct: 760  WKNKADGLQSSGGSAAEIDEAKKMIILFDSLQLAHKVILNSFYGYVMRKGSRWYSMEMAG 819

Query: 804  VVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLPGSFPENFTFKTKDLKKKLTISYPC 863
            V   TGA IIQ AR L+E+IG+PLELDTDGIWC+LPG FP+NF+F  K+  KKL ISYPC
Sbjct: 820  VTCLTGAHIIQMARELVERIGRPLELDTDGIWCMLPGGFPDNFSFTLKN-GKKLGISYPC 878

Query: 864  VMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEFEVDGPYKAMILPASKEEGILIKK 923
            VMLN  V    TN QYQ LVDP +  YETHSE SI FEVDGPY+AMILP SKEE   +KK
Sbjct: 879  VMLNHLVHARYTNHQYQALVDPKTFKYETHSENSIFFEVDGPYRAMILPTSKEEDKNLKK 938

Query: 924  RYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFLHGSTIEECYSAVAAVANRWL 983
            RYAVFN DG+LAELKGFE+KRRGELKLIK+FQ +LF  FL GS + E Y++VA VA+RWL
Sbjct: 939  RYAVFNHDGSLAELKGFEVKRRGELKLIKIFQTQLFKFFLEGSNLAETYASVARVADRWL 998

Query: 984  DLLDNQGKDIADSELIDYISESSTMSKSLADYGEQKSCAVTTARRLSDFLGDTMVKDKGL 1043
            D+L   G  +AD ELID ISE+ +MSK+L +YG QKS ++TTA+RL++FLG+ M+KDKGL
Sbjct: 999  DVLYEHGTTLADEELIDLISENRSMSKTLEEYGSQKSTSITTAKRLAEFLGEQMIKDKGL 1058

Query: 1044 RCQYIVACEPQGTPVSERAVPVAIFETDAEIMKFYLRKWCKTS-SDVGIRSIVDWSYYKQ 1102
             C+YI++  P+ TPV+ERA+PVAIF  +  I +F+LRKW K    D+  R+++DW YY +
Sbjct: 1059 NCKYIISSRPRNTPVTERAIPVAIFSAEDNIKRFFLRKWLKEDPGDMDPRTVIDWDYYLE 1118

Query: 1103 RLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLYKKVREKEDKFRQRKLVDIFSSLKKDDF 1162
            RL S IQK+ITIPAA+QK+ NPVPRV HPDWL +++  K+D+F+Q+K+ D+F+  +K   
Sbjct: 1119 RLGSVIQKLITIPAALQKLRNPVPRVAHPDWLQRRINTKDDRFKQKKMTDLFTKSEKTPL 1178

Query: 1163 LNKTCNAETNLMDENVEDLEDFPKKRRNSVNGPRPIVRCFEVNNEQKTVKTTDQVDSLRQ 1222
               + NA  N++D  V+   D  +    S                QKT    ++V   R+
Sbjct: 1179 --SSTNA--NILDHRVQHAGDLDEAIAGST---------------QKTKSPNNKVAQKRK 1219

Query: 1223 QLEPSEVSDQQPSSQNAIDTENIDRIVDYKGWLELKKRKWKDNLDR--RKKQKLGSLRAS 1280
              E +  +   P +       ++    +Y+G+L+ +K+KWK       R++Q  G     
Sbjct: 1220 HPENAPKTALDPFASLPAVMPSMSE--NYEGFLKYQKQKWKIQKQARIRRRQLFG----- 1272

Query: 1281 HQANGVSESLGDMINHKEAQRRTGVGSYFRRQETAMTRCHWQIIQLVPSSQSGVFLAWVV 1340
             + N  S+SL +               +FR Q   +    WQ++QL  +   GV  A+V+
Sbjct: 1273 ERTNVASDSLSN---------------FFRNQAQMLYISTWQVLQLCDTGVPGVVRAFVL 1317

Query: 1341 VEGIMVRIPITVPRLFYLNSK-----DPIVEKFPGRRVNKTLPHGRRSFNLIEVMIDEDQ 1395
            ++  +  + + V R F+LN K     D  V      +VN TLP+G  S  L ++ + E++
Sbjct: 1318 IDQKIHALSVRVQRQFFLNLKRDSLPDIDVPDCEVEKVNHTLPNGHPSVYLFKLSLSEEK 1377

Query: 1396 FRKESKKLAALLADPEVE 1413
            + +E+ K+  L   P VE
Sbjct: 1378 YLEEADKMDILFQHPSVE 1395



 Score =  240 bits (613), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 177/627 (28%), Positives = 294/627 (46%), Gaps = 64/627 (10%)

Query: 1408 ADPEVEVLGWQQNAAKIGMQRCAASSQWFNERISLARYAHI------------------- 1448
            +D E+  LGWQ   A+  + R    S W      LAR+  +                   
Sbjct: 1591 SDMELPPLGWQAFVARRLVTRYLYLSSWIQHLTMLARFGDVPLCNLESEDPRYLIDVSYA 1650

Query: 1449 ---------LWISDDGVPDLGGTSEEDECFA-DEVHQPVLTYPGAYRKVSVELKIHHLSV 1498
                     LW S    PD  G   +D   A D+V+ P +  PGAY  V +EL++ +LS+
Sbjct: 1651 RRLQQNNVVLWWSSGPRPDHAGYERDDILGALDKVNMPSVNVPGAYSTVCIELEVRNLSI 1710

Query: 1499 NALLKSNQVNEMEGGGLFGFDQDMNSGPYNNELCGFDETTSSAPAFRVVKQLIQRCLTDA 1558
            N +L S+ +NEM+G           SG   +    + E   ++    V++++++   T+A
Sbjct: 1711 NTILTSSIINEMDGSDTLL----APSGDGEDTGVFYSEKAFASAGVVVLREMVKHWWTEA 1766

Query: 1559 VTSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEFRKLGATIIFA 1618
              +GN  AD ++QHL RW+ SP S L+D  LH  +  + +K F  L+AEFR++G+ ++FA
Sbjct: 1767 C-AGNNMADIMVQHLIRWVESPVSCLYDRSLHNYVRLMSRKSFQRLMAEFRRVGSHVVFA 1825

Query: 1619 NFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLFMDQYNYGGIP 1678
            + +++++ T K ++  A AY   +LK+++    F +I+LE   +W  L++ D+YNYGG  
Sbjct: 1826 SSTRLLLQTTKTEVGNAYAYSQYVLKSIRANPSFHFIDLEIKEYWDYLVWYDEYNYGGKG 1885

Query: 1679 ARADESLDDDSQVDIVSSWNIAEYLPKEIQDHFVLVVSEFMYIPWKHAQKLAASRASLQE 1738
             R + +  D+  ++    W ++ +LP  +Q  F   + E  YI   H+ K    R  LQ+
Sbjct: 1886 CR-EVTEADEQDLETAMHWQLSRFLPMPMQTIFHDWIVE--YIELMHSLK----RPELQD 1938

Query: 1739 GS-SCTPSITVA----AAENFESHIVQYVKGEISSYFTGKLLSIV---RDAIHHMKKMNN 1790
            G  S TP  T        E  +  I   +    S     ++  ++   RD + H +  ++
Sbjct: 1939 GDLSSTPRPTQIPIGRTNEGDDDEITAILSDRFSKPLKKQISGLIRRQRDEMLHPELASD 1998

Query: 1791 DQHNS-PGVMQTAANIHKVDAPLEFIKHVCAAFALDQNVQHDVLVMRKNLLKYVRVREFA 1849
                  PGV+    +    +  LE  K +    +L +    +  ++R+ LL    VREF+
Sbjct: 1999 YAFPVLPGVLVGPKD--NRNPSLELTKLLMQVLSLSKTTTLESRLLRRELLALFEVREFS 2056

Query: 1850 PEAEFRDPCPSFILPNVICSYCNDCRDLDLCRDMALL----------AQDWHCAMPQCGQ 1899
             E  F +P  S  LP + C+ C   RDLDLCRD  +L           Q W C  P C  
Sbjct: 2057 KEGRFENPSASLKLPEMSCNSCCLIRDLDLCRDEDVLPDASSEASKSTQPWRC--PFCHA 2114

Query: 1900 PYDREVMENALLQIVRQRERLYHLQDLVCIRCNQVKAAHLAEQCACAGSFRCKEDASDFR 1959
             YDR   E  L+  V      +  QD+ C +C+ +K +   E C+C+G++    D  +  
Sbjct: 2115 EYDRLATEEFLIGQVHGFVVEWQTQDIKCSKCSGLKVSDFMEHCSCSGAWTATVDRKEIE 2174

Query: 1960 SKMQIFLNIANRQGFQLLQECTSWILE 1986
             K+Q+  ++A     QLL+     +LE
Sbjct: 2175 KKLQVLESVAKFHKLQLLEHIVEEVLE 2201


>gi|317036104|ref|XP_001397618.2| DNA polymerase epsilon catalytic subunit A [Aspergillus niger CBS
            513.88]
          Length = 2233

 Score = 1377 bits (3564), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 703/1414 (49%), Positives = 951/1414 (67%), Gaps = 70/1414 (4%)

Query: 27   LEAKLGYDLFSEGDKRLGWLLTFASSSLEDEDTRKVYSCIDLYFVSQDGSTFKSKYKFRP 86
            ++  LG+  +  G+KR+GWL+   S+S+ED +     + +D YF+   G +FK+  ++ P
Sbjct: 54   IDESLGFPRYESGEKRVGWLINMHSTSIEDPNVPGGRAGVDYYFLEDGGGSFKATVEYDP 113

Query: 87   YFYAATKEKMEMDVEAYLRRRYESQIADIEILEKEDLDLKNHLSGLHKSYLKISFDTVQQ 146
            YF  A K+  E +VE + RR +E  I  +  +EKEDL L NHL G  +++L+++F +V  
Sbjct: 114  YFLIAVKKGRETEVEDWCRRTFEGLIKKVLRVEKEDLKLPNHLLGYKRTFLQLNFASVSH 173

Query: 147  LMDVKKDLLHVVERNQAKFDAAEAY--------------ESILTGKREQRPQDFLDCIVD 192
            L++V+K LL + E+N+   +  + Y              + ++   R     +  D I+D
Sbjct: 174  LLEVRKTLLPLAEKNKKNVNVMDTYMEISSANAGFDLFDDELINESRSNATMNASDFIID 233

Query: 193  LREYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLLEKRVDLLQRAEVHVCAFDIETTKLP 252
            +REYDVPYH+R +ID D+R G+WY V        L    + L RA+  V AFDIETTKLP
Sbjct: 234  IREYDVPYHVRVSIDKDIRIGKWYTVEAKHGVISLTCIEERLTRADPVVLAFDIETTKLP 293

Query: 253  LKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNVNNEIE 312
            LKFPD+  D IMMISYM+DGQG+LI NRE V EDI D EYTPKPE+ G F + N  +E  
Sbjct: 294  LKFPDSVIDQIMMISYMIDGQGFLITNREIVSEDINDFEYTPKPEYSGPFMIFNEPDERG 353

Query: 313  LLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDKNQGECRAKF 372
            +L  +F H++E KP +  TYNGD+FDWPF+E RA+  G  M  E+GF+  KN  +     
Sbjct: 354  VLERFFEHIKEAKPTVIATYNGDFFDWPFVEARASVLGIDMYREIGFR--KNSEDIYQSD 411

Query: 373  AC-HLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQMMASYSV 431
             C H+DCFAWV RDSYLPQGS+GLKAVT AKLGYDP E++PE M  +A E+PQ +A YSV
Sbjct: 412  HCVHMDCFAWVNRDSYLPQGSRGLKAVTVAKLGYDPDELDPELMTPYASERPQTLAEYSV 471

Query: 432  SDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVICPNKH 491
            SDAVATYYLYM YVHPFIFSL TI+P++PD+ LRKG+GTLCEMLLMVQAY+ N++ PNKH
Sbjct: 472  SDAVATYYLYMKYVHPFIFSLCTILPINPDDTLRKGTGTLCEMLLMVQAYQGNIVLPNKH 531

Query: 492  QSDPEKFYRNHLLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQLLNNLDRDLQYA 551
            +  PE FY  HLLESETY+GGHVE +E+GVFRSD+P +F + P+A ++LL +LD  L+++
Sbjct: 532  KDPPESFYEGHLLESETYVGGHVESIEAGVFRSDIPVTFNVQPAAIDELLRDLDAALKFS 591

Query: 552  IKVEGKMDLESVSNYDEVKNAIMEKLLRLQEEPIREECPLIYHLDVAAMYPNIILTNRLQ 611
            I+VE K  ++ V+NY+EVK  I +KL+ L+E P R+E P IYHLDVA+MYPNI++TNRLQ
Sbjct: 592  IEVEEKKSMDDVTNYEEVKKQIADKLIDLKERPHRDEVPFIYHLDVASMYPNIMITNRLQ 651

Query: 612  PPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYYHLKKQIESEFVDGTNGH 671
            P S++ +  C ACDFNRPGKTC R+L W WRGE    KR +Y  +++ + +E   G + +
Sbjct: 652  PDSMIQESNCAACDFNRPGKTCDRRLPWAWRGEFLPAKRDEYNMIRQAVANERFPGKHKN 711

Query: 672  LS-KSFLDLPKMEQQSRLKDRLKKYCQKAYKRVLDKPVTELREAGICMRENSFYVDTVRS 730
               +SF D+   EQ   +K RL+ Y +K Y ++ D   T +REA IC REN FYVDTVRS
Sbjct: 712  SPMRSFGDMSIEEQAGIIKKRLQDYSKKIYHKIHDSK-TMVREAIICQRENPFYVDTVRS 770

Query: 731  FRDRRYEYKGLNKVWKGKLSEAKASGNS-IKIQEAQDMVVLYDSLQLAHKCILNSFYGYV 789
            FRDRRY++KG  KVWKGK    K+SG S  +++EA+ M+VLYDSLQLAHK ILNSFYGYV
Sbjct: 771  FRDRRYDFKGKQKVWKGKTDALKSSGASAAEVEEAKKMIVLYDSLQLAHKVILNSFYGYV 830

Query: 790  MRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLPGSFPENFTFK 849
            MRKG+RWYSMEMAGV   TGA+IIQ AR L+E+IG+PLELDTDGIWC+LPGSFPENF+F 
Sbjct: 831  MRKGSRWYSMEMAGVTCLTGARIIQMARELVERIGRPLELDTDGIWCMLPGSFPENFSFT 890

Query: 850  TKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEFEVDGPYKAM 909
             K+  KKL ISYPCVMLN  V  + TN QYQTLVD  +  YE +SE SI FEVDGPYKAM
Sbjct: 891  LKN-GKKLGISYPCVMLNHLVHGSYTNHQYQTLVDQATFRYEQNSENSIFFEVDGPYKAM 949

Query: 910  ILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFLHGSTIE 969
            ILP SKEE   +KKRYAVFN DG+LAELKGFE+KRRGELKLIK+FQ ++F  FL G+T+ 
Sbjct: 950  ILPTSKEEDKNLKKRYAVFNHDGSLAELKGFEVKRRGELKLIKIFQTQIFRFFLEGTTLT 1009

Query: 970  ECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLADYGEQKSCAVTTARRL 1029
            E Y+AVA VA+RWLD+L   G  +AD ELID ISE+ +M+K+L +YG QKS ++TTARRL
Sbjct: 1010 ETYAAVAKVADRWLDVLYEHGATLADEELIDLISENRSMTKTLEEYGNQKSTSITTARRL 1069

Query: 1030 SDFLGDTMVKDKGLRCQYIVACEPQGTPVSERAVPVAIFETDAEIMKFYLRKWCKTS-SD 1088
            ++FLG+ MVKDKGL C+YI++ +P+ TPV+ERA+PVAIF  +  + +F+LRKW K    D
Sbjct: 1070 AEFLGEQMVKDKGLNCKYIISSKPRNTPVTERAIPVAIFSAEENVKRFFLRKWLKDDPGD 1129

Query: 1089 VGIRSIVDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLYKKVREKEDKFRQR 1148
            +  R+++DW YY +RL S +QK+ITIPAA+QK+ NPVPRV HPDWL +++  K+D+F+Q 
Sbjct: 1130 MDPRTVIDWDYYLERLGSVVQKLITIPAALQKIRNPVPRVAHPDWLQRRINTKDDRFKQT 1189

Query: 1149 KLVDIFSSLKKDDFLNKTCNAETNLMDENVEDLEDFPKKRRNSVNGPRPIVRCFEVNNEQ 1208
            K+ D+F    K +  N   +  TN++D  V+   D  +   NS    +P       ++E 
Sbjct: 1190 KMTDMFIKSDKPE-KNPLTDISTNILDHRVQHTGDLDEAIANSTQKLKP-------SSET 1241

Query: 1209 KTVKTTDQVDSL-RQQLEP-SEVSDQQPSSQNAIDTENIDRIVDYKGWLELKKRKWKDNL 1266
            K  +     + L +  L+P + +  Q PS  +           DY G+L+ +K+KWK   
Sbjct: 1242 KVSQKRKHPEGLSKTSLDPFATLPAQMPSMAD-----------DYVGFLKYQKQKWKIQK 1290

Query: 1267 DR--RKKQKLGSLRASHQANGVSESLGDMINHKEAQRRTGVGSYFRRQETAMTRCHWQII 1324
                R++Q  G      +AN   +SL ++               FR Q   +    WQI+
Sbjct: 1291 QARIRRRQLFG-----ERANAGGDSLSNL---------------FRNQAELLYINTWQIL 1330

Query: 1325 QLVPSSQSGVFLAWVVVEGIMVRIPITVPRLFYLNSK-----DPIVEKFPGRRVNKTLPH 1379
            QL  + + G+  A+V+++  +  + + VPR  Y+N K     D  V      +V  TLP+
Sbjct: 1331 QLSETGRPGIVRAFVLIDRKIHALTVKVPRQIYVNLKQDSLPDVDVPDCEVEKVTHTLPN 1390

Query: 1380 GRRSFNLIEVMIDEDQFRKESKKLAALLADPEVE 1413
            G  S +L ++ + E+ + +E++K+  L   P VE
Sbjct: 1391 GHPSVHLFKLTLSEETYLREAEKIDVLFQHPSVE 1424



 Score =  236 bits (601), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 177/630 (28%), Positives = 293/630 (46%), Gaps = 69/630 (10%)

Query: 1407 LADPEVEVLGWQQNAAKIGMQRCAASSQWFNERISLARYAHI------------------ 1448
            ++D ++  LGWQ   A+  +      S W      LARY  +                  
Sbjct: 1619 VSDMDLPPLGWQSFIARRLVTHYLYLSAWVQHLTLLARYGDVPLCNLENDDPRFLIDISY 1678

Query: 1449 ----------LWISDDGVPDLGGTSEED-ECFADEVHQPVLTYPGAYRKVSVELKIHHLS 1497
                      LW S +  PD  G  ++D     ++V  P +  P AY  V +EL++ +L+
Sbjct: 1679 ARRLQQNNVVLWWSSNPRPDHAGYEKDDISGPLEKVSMPSVNVPSAYTTVCIELEVRNLA 1738

Query: 1498 VNALLKSNQVNEMEGGGLFGFDQDMNSGPYNNELCGFDETTSSAPAFRVVKQLIQRCLTD 1557
            +N +L S+ +NEMEG          ++ P    +   ++  +SA A  V++++++   T+
Sbjct: 1739 INTILTSSIINEMEGADTLLASSGQSADPNGGGVLYSEKAFASAGAV-VLREMVKHWWTE 1797

Query: 1558 AVTSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEFRKLGATIIF 1617
            A   GN  AD ++QHL RW+ SP S L+D  LH  +  + +K F  L+AEFR++G+ +IF
Sbjct: 1798 AC-DGNSMADIMVQHLIRWVESPVSCLYDRSLHHYVRMLSRKSFQRLMAEFRRVGSNVIF 1856

Query: 1618 ANFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLFMDQYNYGGI 1677
            A+ +++++ T K ++  A AY   +LK+++    F +I+LE   +W  LL+ D+YNYGG 
Sbjct: 1857 ASSTRLLLQTSKTEVGNAYAYSQYVLKSIRANPSFHFIDLEIKEYWDYLLWYDEYNYGG- 1915

Query: 1678 PARADESLDDDSQ-VDIVSSWNIAEYLPKEIQDHFVLVVSEFMYIPWKHAQKLAASRAS- 1735
                 E ++ D Q ++ V  W +   LP  +Q  F   V E  YI   H  K   +  S 
Sbjct: 1916 -KGCQEVVESDEQELETVMHWQLNRTLPTPMQTIFHDWVVE--YIELMHGLKRPDTNDST 1972

Query: 1736 --LQEGSSCTPS------ITVAAAENFESHIVQYVKGEISSYFTGKLLSIVRDAIHHMKK 1787
              L +     PS      ++ A AE F   + + + G         L+   RD + H + 
Sbjct: 1973 PRLTQIPIGRPSDEDSQEVSAALAEKFSKPLKKQITG---------LIRRQRDELLHPEL 2023

Query: 1788 MNNDQHNS-PGVMQTAANIHKVDAPLEFIKHVCAAFALDQNVQHDVLVMRKNLLKYVRVR 1846
             ++      PGV+ +  N  K +  LE +K +    +L +    +  ++R+ LL    VR
Sbjct: 2024 ASDYIFPVLPGVL-SDPNEEKRNPVLELVKLLMQVLSLSKITTMETRLLRRELLALFEVR 2082

Query: 1847 EFAPEAEFRDPCPSFILPNVICSYCNDCRDLDLCRDMALL-----------AQDWHCAMP 1895
            EF+ E  F +P  S  +P + C  C   RDLDLCRD  +L            + W C  P
Sbjct: 2083 EFSKEGRFENPGASLKIPELTCGSCCLIRDLDLCRDEDVLPEPGVDASKTSTKPWRC--P 2140

Query: 1896 QCGQPYDREVMENALLQIVRQRERLYHLQDLVCIRCNQVKAAHLAEQCACAGSFRCKEDA 1955
             C   YDR   E  L+  ++     +  QDL C +C  +K +   E C+C+G +    D 
Sbjct: 2141 FCQTEYDRLAQEEILIGQIQGYIVGWQTQDLKCSKCGTLKVSDFMEHCSCSGVWVETMDR 2200

Query: 1956 SDFRSKMQIFLNIANRQGFQLLQECTSWIL 1985
             +   K+ I  ++A   G +LL+     +L
Sbjct: 2201 KEIERKLHILNSVAKFHGLKLLESVVGEVL 2230


>gi|345568213|gb|EGX51111.1| hypothetical protein AOL_s00054g610 [Arthrobotrys oligospora ATCC
            24927]
          Length = 2225

 Score = 1376 bits (3562), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 710/1423 (49%), Positives = 932/1423 (65%), Gaps = 77/1423 (5%)

Query: 22   SAEEELEA---------KLGYDLFSEGDKRLGWLLTFASSSLEDEDTRKVYSCIDLYFVS 72
            S+EE+ EA         K+G+  +  G K++GWL+   S+++EDE+     + +D YF+ 
Sbjct: 42   SSEEKWEATKLANSIDEKMGFPRYEAGPKKIGWLINMHSTAIEDENNIGGKAGVDFYFID 101

Query: 73   QDGSTFKSKYKFRPYFYAATKEKMEMDVEAYLRRRYESQIADIEILEKEDLDLKNHLSGL 132
             +G +FK+   + PY   A K   EM+VE +LRR++E  +  +  L +EDL + NHL G 
Sbjct: 102  DEGGSFKATVLYDPYILIACKAGFEMEVEEWLRRKFEGLVKSLSRLTREDLQMPNHLMGY 161

Query: 133  HKSYLKISFDTVQQLMDVKKDLLHVVERNQAKFDAAEAYESILT--------------GK 178
             ++++KI F  V  L+ V+K L+ + E N+ + DA + Y  +                G+
Sbjct: 162  RRTFIKIDFHNVPDLLSVRKVLMPIAEDNKKQVDAIDTYAEVTNSRAGFDLFDDPLDMGR 221

Query: 179  REQRPQDFLDCIVDLREYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLLEKRVDLLQRAE 238
                  D  D IVD+REYDVPYH+R +ID D+R G+WY V        L    D L RA+
Sbjct: 222  ANNAGVDASDYIVDIREYDVPYHVRVSIDLDIRIGKWYTVEAKHGIIGLSLIEDRLARAD 281

Query: 239  VHVCAFDIETTKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEF 298
              V AFDIETTKLPLKFPDA  D IMMISYM+DGQG+LI NRE V EDIED EYTPKPE+
Sbjct: 282  PVVLAFDIETTKLPLKFPDALIDQIMMISYMIDGQGFLITNREIVSEDIEDFEYTPKPEY 341

Query: 299  EGYFKVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELG 358
            EG F + N  NE  +L  +F H++E +P + VTYNGD+FDWPF+E RA+  G  M  E+G
Sbjct: 342  EGEFMIFNEPNERGVLERFFDHIKEARPTVIVTYNGDFFDWPFVEARASALGIDMYHEVG 401

Query: 359  FQCDKNQGECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRF 418
            F+ D ++G  ++ +  H+D FAWV RDSYLPQGS+GLKAVT AKLGYDP E++PE M R+
Sbjct: 402  FRKD-SEGIYKSNYCAHMDAFAWVNRDSYLPQGSRGLKAVTTAKLGYDPDELDPELMTRY 460

Query: 419  AKEKPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMV 478
            A E+PQ +A YSVSDAVATYYLYM YVHPFIFSL TIIP+ PD+VLRKG+GTLCEMLLMV
Sbjct: 461  ASERPQTLAEYSVSDAVATYYLYMKYVHPFIFSLCTIIPLGPDDVLRKGTGTLCEMLLMV 520

Query: 479  QAYKANVICPNKHQSDPEKFYRNHLLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYE 538
            QA++ N+I PNKH++  E F+  HL+ESETY+GGHVE LE+GVFRSD+P +F +DP A +
Sbjct: 521  QAFQKNIIIPNKHKNPDEVFWEGHLVESETYVGGHVEALEAGVFRSDIPANFSVDPGAID 580

Query: 539  QLLNNLDRDLQYAIKVEGKMDLESVSNYDEVKNAIMEKLLRLQEEPIREECPLIYHLDVA 598
            +LL +LD  L++AI VE    LE V+NYDEVK  I   L+ L+  P R E PLIYHLDVA
Sbjct: 581  ELLRDLDAALKFAIVVESNKKLEDVTNYDEVKEKIAANLMDLKTTPNRSERPLIYHLDVA 640

Query: 599  AMYPNIILTNRLQPPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYYHLKK 658
            +MYPNI+ TNRLQP S++ +  C ACDFNRPGKTC R+L W WRGE    KR +Y  +++
Sbjct: 641  SMYPNIMTTNRLQPDSMIKESDCAACDFNRPGKTCDRRLPWAWRGEFLPPKRDEYLMIRR 700

Query: 659  QIESE-FVDGTNGHLSKSFLDLPKMEQQSRLKDRLKKYCQKAYKRVLDKPVTELREAGIC 717
             +E+E F         +S+  LP  EQ   +K RL +Y +K Y ++ +    E REA IC
Sbjct: 701  ALENERFPPKYPNGPYRSWDGLPPSEQAGLIKKRLTEYSKKIYHKIKETRTIE-REAIIC 759

Query: 718  MRENSFYVDTVRSFRDRRYEYKGLNKVWKGKL-SEAKASGNSIKIQEAQDMVVLYDSLQL 776
             REN FYVDTVR FRDRRY +KG  KVWK K  S  KA  N  +I E   MVVL+DSLQL
Sbjct: 760  QRENPFYVDTVRMFRDRRYYFKGEQKVWKNKTDSLKKAGANQAEIDEGGKMVVLFDSLQL 819

Query: 777  AHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWC 836
            AHK ILNSFYGYVMRKG+RWYS+EMAGV   TG++IIQ AR L+E+IG+PLELDTDGIWC
Sbjct: 820  AHKVILNSFYGYVMRKGSRWYSLEMAGVTCLTGSRIIQLARQLVERIGRPLELDTDGIWC 879

Query: 837  VLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSEC 896
            +LP +FPENF F      KKL ISYPCVMLN  V    TN QYQ LVD     YETH+E 
Sbjct: 880  ILPATFPENFVFNLSG-GKKLPISYPCVMLNHLVHDKFTNHQYQDLVDKDKFKYETHAEN 938

Query: 897  SIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQA 956
            SI FEVDGPY+AMILP SKEE   +KKRYAVFN DG+LAELKGFE+KRRGELKLIK+FQ 
Sbjct: 939  SIFFEVDGPYRAMILPTSKEEDKGLKKRYAVFNHDGSLAELKGFEVKRRGELKLIKIFQT 998

Query: 957  ELFDKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLADYG 1016
            ++F  FL G+T+ E Y+AVA VANRWLD+L  QG  +AD ELI+ I E+  M+K+L +YG
Sbjct: 999  QIFKVFLEGTTLAETYAAVAKVANRWLDVLYQQGSTLADEELIELICENRNMAKTLDEYG 1058

Query: 1017 EQKSCAVTTARRLSDFLGDTMVKDKGLRCQYIVACEPQGTPVSERAVPVAIFETDAEIMK 1076
             QKS ++ TARRL++FLGD MVKDKGL C+YI++ +P+G PV+ERAVPVAIF  +  I K
Sbjct: 1059 TQKSTSIKTARRLAEFLGDQMVKDKGLNCKYIISAKPRGAPVTERAVPVAIFSAEESIKK 1118

Query: 1077 FYLRKWCKTS-SDVGIRSIVDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLY 1135
             +LRKW +   +++  R++VDWSYY +RL S IQK+ITIPAA+QKV NPVPR+VHPDWL 
Sbjct: 1119 HFLRKWLREDITNMDPRNVVDWSYYLERLGSVIQKLITIPAALQKVRNPVPRIVHPDWLQ 1178

Query: 1136 KKVREKEDKFRQRKLVDIFSSLKKDDFLNKTCNAETNLMDENVEDLEDFPKKRRNSVNGP 1195
            +++  K+DK +Q+K+ D+F   KK+   + T NA       N++D+EDF           
Sbjct: 1179 RRINAKDDKLKQKKMTDMF---KKEPMADVTSNA------INLQDMEDF--------GST 1221

Query: 1196 RPIVRCFEVNNEQKTVKTTDQVDSLRQQLEPSEVSDQQPSSQNAIDTENIDRIVDYKGWL 1255
             P+ +  +       +       SL+++  P  V    P +        ID+  DYKG+L
Sbjct: 1222 APVGKGLD-----SVLNKVAASQSLKRK-APEPVVPVDPYASLPAKMPAIDK--DYKGFL 1273

Query: 1256 ELKKRKWKDNLDRRKKQKLGSLRASHQANGVSESLGDMINHKEAQRRTGVGSYFRRQETA 1315
            + +K+KWK  + R  +++   L    QAN                   G+ S FR+Q   
Sbjct: 1274 QYQKKKWK--IQRHARERRRQLFGDRQAN----------------TGEGLDSMFRQQAQL 1315

Query: 1316 MTRCHWQIIQLVPSSQSGVFLAWVVVEGIMVRIPITVPRLFYLNSKDPIVEKF-----PG 1370
            +    WQ++    +   G   A V+++  +  + + VPR  ++N +   V  F       
Sbjct: 1316 VYMKAWQVLHFAETDVPGEVNAHVLIDRKIHIVKVVVPRTIFINFRSKDVPNFELDQCSS 1375

Query: 1371 RRVNKTLPHGRRSFNLIEVMIDEDQFRKESKKLAALLADPEVE 1413
              VN TLP+G  S NL  + + E  + ++ +K+ AL + P VE
Sbjct: 1376 EPVNFTLPNGHSSSNLFRLTMPEQVYVEKFQKMVALTSHPTVE 1418



 Score =  283 bits (725), Expect = 5e-73,   Method: Compositional matrix adjust.
 Identities = 184/631 (29%), Positives = 310/631 (49%), Gaps = 70/631 (11%)

Query: 1408 ADPEVEVLGWQQNAAKIGMQRCAASSQWFNERISLARYAHI------------------- 1448
             D  +  LGWQ   AK  + R  +   W +  I LARY ++                   
Sbjct: 1611 TDSSLPPLGWQNFVAKRIVIRYLSLGSWLSHLIELARYGNVPLCNLVNHDPRFLVDIAYA 1670

Query: 1449 ---------LWISDDGVPDLGGTSEEDECFADE-VHQPVLTYPGAYRKVSVELKIHHLSV 1498
                     LW S   +PD  G  ++    + E V+ P +   G+Y  V +EL + +L++
Sbjct: 1671 RRLQASNVVLWWSSTPIPDHAGHQKDSIVRSLEHVNMPDINNRGSYSSVCIELDVRNLAI 1730

Query: 1499 NALLKSNQVNEMEGGGLFGFDQDMNSGPYNNE--LCGFDETTSSAPAFRVVKQLIQRCLT 1556
            N LL S+ +NE+EG    GF+    +G  N E     + E T ++ +  V++ L++    
Sbjct: 1731 NTLLTSSLINELEGADAMGFNP---AGKSNGEEQQSLYTENTFASASITVLRDLVKSWWG 1787

Query: 1557 DAVTSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEFRKLGATII 1616
            DA T GN  AD ++QHL RW+ SP S L+D  LH  +  + +K F  LLA+FR++G++++
Sbjct: 1788 DA-TKGNSMADLMVQHLVRWVESPESFLYDHALHFYVQTMSKKAFLQLLADFRRVGSSVV 1846

Query: 1617 FANFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLFMDQYNYGG 1676
            +A+ +++I+ T K ++  A AY   +LKA++ + LF +++L+   +W  LL+ D YNYGG
Sbjct: 1847 YASANRLILQTTKAEVGTAYAYSQYILKAIKAKPLFNFLDLDVKEYWDYLLWYDPYNYGG 1906

Query: 1677 IPARADESLDDDSQ-VDIVSSWNIAEYLPKEIQDHFVLVVSEFMYI--PWKHAQKLAASR 1733
            +     E ++ D Q ++++  W  ++ LP+ +Q+ F   V EF++I   +KH +  A   
Sbjct: 1907 LA--CSEVVEADKQKLNLIMHWQFSKALPQTMQEAFSTWVVEFVHILHSFKHPENSAGMI 1964

Query: 1734 ASLQEGSSCTPSITVAAAEN------FESHIVQYVKGEISSYFTGKLLSIVRDAIHHMKK 1787
             S    +   P  T    ++           ++ +K  IS     +LL +  D I H  +
Sbjct: 1965 ESTPRMTQLPPRATDGGKDDIGDVLTLPKEFLKPLKKNIS-----QLLRLQHDIILHPDR 2019

Query: 1788 MNNDQH-NSPGVMQTAANIHKVDAPLEFIKHVCAAFALDQNVQHDVLVMRKNLLKYVRVR 1846
             +  +  N PG    ++N     A LE +K + A FAL +++      +RK+LL    ++
Sbjct: 2020 QSEFEFPNLPGTKLGSSN-----AVLELVKAMSAVFALPKDLMLSTRQLRKDLLHMFDIK 2074

Query: 1847 EFAPEAEFRDPCPSFILPNVICSYCNDCRDLDLCRDMALLAQ-----------DWHCAMP 1895
            EF+ E +F +   S     VIC  C   RDLD CRD  L+ +            W C   
Sbjct: 2075 EFSKEGQFENTTESLRFEQVICQNCTMSRDLDFCRDEDLMPELDVDGKPSKERAWRCF-- 2132

Query: 1896 QCGQPYDREVMENALLQIVRQRERLYHLQDLVCIRCNQVKAAHLAEQCACAGSFRCKEDA 1955
             CG  YDR  ++  ++  V +    Y  QDLVC RC ++K +   E CAC+G ++     
Sbjct: 2133 NCGHEYDRLALQERMVGEVEEMLIRYSTQDLVCFRCKKIKTSDFQEHCACSGVWKLTIPK 2192

Query: 1956 SDFRSKMQIFLNIANRQGFQLLQECTSWILE 1986
                ++++I+ ++A     Q+L+E    ILE
Sbjct: 2193 EGIVAQLKIYKSVAEYYSLQMLEENVKVILE 2223


>gi|396483683|ref|XP_003841764.1| similar to DNA polymerase epsilon [Leptosphaeria maculans JN3]
 gi|312218339|emb|CBX98285.1| similar to DNA polymerase epsilon [Leptosphaeria maculans JN3]
          Length = 2239

 Score = 1376 bits (3561), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 701/1418 (49%), Positives = 946/1418 (66%), Gaps = 76/1418 (5%)

Query: 27   LEAKLGYDLFSEGDKRLGWLLTFASSSLEDEDTRKVYSCIDLYFVSQDGSTFKSKYKFRP 86
            ++  +G+  F  G K++GWL+   S++LEDE+     + +D YF+ ++G TFK+  ++ P
Sbjct: 55   IDESMGFARFESGKKKVGWLVNMHSTALEDENVPGGRAGVDFYFIGEEGDTFKATLEYDP 114

Query: 87   YFYAATKEKMEMDVEAYLRRRYESQIADIEILEKEDLDLKNHLSGLHKSYLKISFDTVQQ 146
            YF  A K+  E +VE + RR YE  I +I+ +EKEDL + NHL+G  +++L++SF  V  
Sbjct: 115  YFLLAVKKGREQEVEEFCRRSYEGLIKNIKRVEKEDLSMPNHLTGYRRTFLQLSFANVND 174

Query: 147  LMDVKKDLLHVVERNQAKFDAAEAYESILTG---------------KREQRPQDFLDCIV 191
            L+ V+K +  V+E+N+   +A + Y  + +G               KR     D  D IV
Sbjct: 175  LLAVRKVVTPVIEKNKKNINAMDTYAEVASGNVGMDFFDNDDYEHEKRFTTTVDASDFIV 234

Query: 192  DLREYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLLEKRVDLLQRAEVHVCAFDIETTKL 251
            D+REYDVPYH+R AID DVR G WY V        +    D L  A+  V A+DIETTKL
Sbjct: 235  DIREYDVPYHVRVAIDKDVRIGNWYTVEAKHGIITITCIEDRLTPADPVVMAYDIETTKL 294

Query: 252  PLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNVNNEI 311
            PLKFPDA  D IMMISYM+DGQG+LI NRE V EDI D EYTPKPE++G F + N  +E 
Sbjct: 295  PLKFPDAVIDQIMMISYMIDGQGFLITNREIVSEDIADFEYTPKPEYQGPFMIFNEPDEK 354

Query: 312  ELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDKNQGEC-RA 370
             ++  +F H++E +P + VTYNGD+FDWPF+E RA+  G  M  E+GF+  KN  +  ++
Sbjct: 355  AVIERFFEHIKEAQPTVMVTYNGDFFDWPFVEARASVLGIDMYREIGFK--KNSEDIYQS 412

Query: 371  KFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQMMASYS 430
             +  H+D F+WV RDSYLPQGS+GLKAVT AKLGYDP E++PE M  +A E+PQ +A YS
Sbjct: 413  NYCAHMDAFSWVSRDSYLPQGSRGLKAVTMAKLGYDPDELDPELMTPYAAERPQTLAEYS 472

Query: 431  VSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVICPNK 490
            VSDAVATYYLYM YVHPFIF+L  I+P+ PD+ LRKG+GTLCEMLLMVQAY+  ++ PNK
Sbjct: 473  VSDAVATYYLYMKYVHPFIFALCKILPLGPDDALRKGTGTLCEMLLMVQAYQKGIVLPNK 532

Query: 491  HQSDPEKFYRNHLLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQLLNNLDRDLQY 550
            HQ+  E F+  HLLESETY+GGHVE LE+GVFRSD+P +F +DP+A ++LL +LD  L++
Sbjct: 533  HQAPKEAFWEGHLLESETYVGGHVEALEAGVFRSDIPYNFAVDPTAIDELLRDLDAALKF 592

Query: 551  AIKVEGKMDLESVSNYDEVKNAIMEKLLRLQEEPIREECPLIYHLDVAAMYPNIILTNRL 610
            +I+VE K  LE V+NYDE+K  I+EKLL+L+  P R E PLIYHLDVA+MYPNI+ TNRL
Sbjct: 593  SIEVEEKKKLEDVTNYDEIKAEIVEKLLQLKATPNRSERPLIYHLDVASMYPNIMTTNRL 652

Query: 611  QPPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYYHLKKQIESEFVDGTNG 670
            QP S++ +  C ACDFNRPGKTC R++ W WRGE    KR +Y  ++  +E+E   G   
Sbjct: 653  QPDSMIKEANCAACDFNRPGKTCDRRMPWAWRGEYLPAKRDEYNMVRNALENEKFPGKYP 712

Query: 671  HLS-KSFLDLPKMEQQSRLKDRLKKYCQKAYKRVLDKPVTELREAGICMRENSFYVDTVR 729
            +   ++F  L + EQ  +++ RL  Y +K Y +V D    E REA IC REN FYVDTV 
Sbjct: 713  NSPMRTFQQLSEDEQAEKVRKRLTDYSKKIYHKVHDATTIE-REAIICQRENPFYVDTVS 771

Query: 730  SFRDRRYEYKGLNKVWKGKLSEAKASGNS-IKIQEAQDMVVLYDSLQLAHKCILNSFYGY 788
             FRDRRY++KG  KVWKGK    K++G S  +I+ A+ M+VL+DS+QLAHK ILNSFYGY
Sbjct: 772  GFRDRRYDFKGKQKVWKGKTEALKSAGASATEIENAKKMIVLFDSMQLAHKVILNSFYGY 831

Query: 789  VMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLPGSFPENFTF 848
            VMRKG+RWYS+EMAGV   TGA+IIQ AR L+E+IG+PLELDTDGIW +LP +FPENF F
Sbjct: 832  VMRKGSRWYSLEMAGVTCLTGARIIQLARSLVERIGRPLELDTDGIWAILPATFPENFAF 891

Query: 849  KTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEFEVDGPYKA 908
            K  +  KKL ISYPC MLN  V    TN QY+TLVDP +  YE HS+ SI FEVDGPYKA
Sbjct: 892  KLNN-GKKLAISYPCTMLNHLVHAQYTNHQYETLVDPQTFRYEKHSDNSIFFEVDGPYKA 950

Query: 909  MILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFLHGSTI 968
            MILP SKEE   +KKRYAVFN DG+LAELKGFE+KRRGELKLIK FQ+++F  FL G+T+
Sbjct: 951  MILPTSKEEDKNLKKRYAVFNHDGSLAELKGFEVKRRGELKLIKNFQSQIFKFFLEGTTL 1010

Query: 969  EECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLADYGEQKSCAVTTARR 1028
            EE Y AVA VANRWLD+LD +G ++AD ELID I E+ +M+K+L +YG QKS A+TTA+R
Sbjct: 1011 EETYGAVAKVANRWLDILDTRGANLADEELIDLIVENKSMAKTLEEYGAQKSTAITTAKR 1070

Query: 1029 LSDFLGDTMVKDKGLRCQYIVACEPQGTPVSERAVPVAIFETDAEIMKFYLRKWCKT-SS 1087
            L++FLG+ MVKDKGL C+YI++  P+  PV+ERAVP++IF  +  + +++LRKW K    
Sbjct: 1071 LAEFLGEQMVKDKGLNCKYIISKTPRNAPVTERAVPMSIFSAEESVKRYFLRKWLKEDPG 1130

Query: 1088 DVGIRSIVDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLYKKVREKEDKFRQ 1147
            ++ IR+++DW YY++RL+S IQK+ITIPAA QKV NPVPRV HP+WL +++R+KEDK +Q
Sbjct: 1131 EMDIRAVLDWDYYRERLASVIQKLITIPAAYQKVRNPVPRVPHPEWLDRRIRQKEDKLQQ 1190

Query: 1148 RKLVDIFSSLKKDDFLNKTCNAETNLMDENVE-DLEDFPKKRRNSVNGPRPIVRCFEVNN 1206
             K+ D+FS            N++ N+ +  +  DLEDF             + +  +   
Sbjct: 1191 VKMTDMFSK-------KVLTNSDANIANNKISGDLEDF------------GVTKLTQTQA 1231

Query: 1207 EQKTVKTTDQVDSLRQQLEPSEVSDQQPSSQNAIDTENIDRIVDYKGWLELKKRKWKDNL 1266
            + K    T  V + R++ EP+      P +       +I+   DY GWL  +K+KWK   
Sbjct: 1232 QVKKGIVTKMV-AKRKEPEPAVPVQTDPYAALPKVMPSINS--DYPGWLVYQKQKWKIQK 1288

Query: 1267 DRRKKQKLGSLRASHQANGVSESLGDMINHKEAQRRTGVGSYFRRQETAMTRCHWQIIQL 1326
              RK+++                   +   K+      +G++FR Q   +    WQ++QL
Sbjct: 1289 QARKRRR------------------QLFGEKQVDASDAIGTFFRNQAELLFISTWQLVQL 1330

Query: 1327 VPSSQSGVFLAWVVVEGIMVRIPITVPRLFYLNSKDPIVEKFPG---------RRVNKTL 1377
             P+   G   A+V+++  +  + I VPR  YLN +    E  P          + VN TL
Sbjct: 1331 RPTETPGEVRAFVLIDKKIHTLKIIVPRQLYLNLRS---EDLPDVSITGCSVEKVVNHTL 1387

Query: 1378 PHGRRSFNLIEVMIDEDQFRKESKKLAALLADPEVEVL 1415
            P+G  S +L ++ + E  +  ES+ ++ALL  P VE L
Sbjct: 1388 PNGHPSIHLFKLEMPEATYVHESESISALLNHPSVEGL 1425



 Score =  238 bits (608), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 169/638 (26%), Positives = 307/638 (48%), Gaps = 76/638 (11%)

Query: 1403 LAALLADPEVEVLGWQQNAAKIGMQRCAASSQWFNERISLARYAHI-------------- 1448
            L A   D ++  LGWQ   AK  +        W    + LARY  I              
Sbjct: 1614 LQADETDKQLPPLGWQSFIAKRLVGHYLDLGSWVTHLLELARYGDIPLCNLESNDPRFLI 1673

Query: 1449 --------------LWISDDGVPDLGGTSEEDECFA--DEVHQPVLTYPGAYRKVSVELK 1492
                          LW S    PD  G  E+D+ FA  + V  P +   G Y  V +++ 
Sbjct: 1674 DVAYARRLQKDRVILWWSGQAKPDHAGY-EKDDIFAPLETVEMPSINNSGTYSSVCIDIN 1732

Query: 1493 IHHLSVNALLKSNQVNEMEGGGLFGFDQDMNSGPYNNELCG----FDETTSSAPAFRVVK 1548
            + +L++N +L S+ +NE+EG     F+    S  Y++   G    + +   ++    V++
Sbjct: 1733 LRNLAINTILSSSLINELEGADSVSFNPAAPS--YDSAGDGTSTIYSDNAFASAGITVLR 1790

Query: 1549 QLIQRCLTDAVTSGNVF--ADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLA 1606
            ++++    +AV +G+ F  AD ++QHL RW+ SP S L+D  LH  +  + +K    L+ 
Sbjct: 1791 EMVKAWWFEAVQAGHGFSMADVMVQHLVRWVSSPGSFLYDRSLHYYVQIMSKKTLQQLMT 1850

Query: 1607 EFRKLGATIIFANFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSL 1666
            +F+++G+ I+FA+ +++++ T K ++  A AY   ++K ++ + LF+++EL+   +W  L
Sbjct: 1851 DFKRVGSHIVFASPNRLLLQTTKAEVGNAYAYSQYIIKTIKAKPLFQFMELDIKEYWDYL 1910

Query: 1667 LFMDQYNYGGIP-ARADESLDDDSQVDIVSSWNIAEYLPKEIQDHFVLVVSEFMYIPWKH 1725
            ++ D++NYGG   +  DE  +++  ++ +  W +A++LP  +Q  F   V EF  I   H
Sbjct: 1911 VWYDEFNYGGKGCSEVDE--EENQTINNIMCWQLAQFLPPTLQPVFNDWVIEF--IELMH 1966

Query: 1726 AQKLAASRASLQEGSSCTPSITVAAAENFESHIVQYVKGEI-SSYFTGKLLSIVRDAI-- 1782
            A+K    R ++ + SS TP +T          I  Y + +I    FT  L   +   +  
Sbjct: 1967 ARK----RPAVTDPSS-TPRVTQIPLRPLT--IDPYEQTQILPKTFTKPLFKQISTLLRR 2019

Query: 1783 HHMKKMNNDQHNSPGVMQTAANIHKVDAP-LEFIKHVCAAFALDQNVQHDVLVMRKNLLK 1841
             H + ++ +        +   +  K+  P L+ +K +    +LD+ +  +  ++RK LL 
Sbjct: 2020 QHAEILHPELAGDYEFPKLPGSHLKLSNPVLQLVKSIMQVLSLDRAITLEARLLRKELLA 2079

Query: 1842 YVRVREFAPEAEFRDPCPSFILPNVICSYCNDCRDLDLCRDMALL--------------- 1886
               +REF+ EA F++P  + ++  +IC  C   RDLDLCRD +LL               
Sbjct: 2080 LFDIREFSAEATFQNPSATLVVRGLICDDCTCSRDLDLCRDASLLPPVLDNGGADTAPPP 2139

Query: 1887 AQDWHCAMPQCGQPYDREVMENALLQIVRQRERLYHLQDLVCIRCNQVKAAHLAEQCACA 1946
               W C    C   YD+  +E  L   V++    +  QDL C +C ++++    E CACA
Sbjct: 2140 PPKWKCD--NCDASYDKLRIEEHLASEVQKVVLEWCTQDLKCSKCKRLRSNEFMEHCACA 2197

Query: 1947 GSFRCKEDASDFRSKMQIFLNIANRQGFQLL----QEC 1980
            G +   +  +D + ++ ++ N++   G ++L    QEC
Sbjct: 2198 GEWVGTKSKADVKKRLLVYQNVSGFYGLRMLEAVVQEC 2235


>gi|452004431|gb|EMD96887.1| hypothetical protein COCHEDRAFT_1163046 [Cochliobolus heterostrophus
            C5]
          Length = 2209

 Score = 1375 bits (3559), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 696/1400 (49%), Positives = 934/1400 (66%), Gaps = 71/1400 (5%)

Query: 27   LEAKLGYDLFSEGDKRLGWLLTFASSSLEDEDTRKVYSCIDLYFVSQDGSTFKSKYKFRP 86
            ++  +G+  F  G KR+GWL+   S+++EDED     + +D YF+ ++G TFK+  ++ P
Sbjct: 55   IDETMGFARFDSGKKRVGWLVNMHSTTIEDEDVPGGRAGVDFYFIGEEGDTFKATLEYDP 114

Query: 87   YFYAATKEKMEMDVEAYLRRRYESQIADIEILEKEDLDLKNHLSGLHKSYLKISFDTVQQ 146
            YF  A K+  E DVE Y +R YE  +  ++I+EKEDL + NHL+G  + +L ++F  V  
Sbjct: 115  YFLLAVKKGREQDVEEYCKRAYEGLVKTVKIIEKEDLSMPNHLTGYRRKFLMLTFANVSD 174

Query: 147  LMDVKKDLLHVVERNQAKFDAAEAYESILTGKREQRPQDFLDCIVDLREYDVPYHIRFAI 206
            L+ V+K +  +VE+N+   +A + Y  +             D IVD+REYDVPYH+R AI
Sbjct: 175  LLAVRKGVAPIVEKNKKNVNAMDTYAEVAN-----------DFIVDIREYDVPYHVRVAI 223

Query: 207  DNDVRCGQWYDVSISSTGPLLEKRVDLLQRAEVHVCAFDIETTKLPLKFPDADYDIIMMI 266
            D DVR G WY V        +    D L  A+  V A+DIETTKLPLKFPDA  D IMM+
Sbjct: 224  DKDVRIGNWYTVEAKHGVVSITCIEDRLTPADPVVMAYDIETTKLPLKFPDAAIDQIMMV 283

Query: 267  SYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNVNNEIELLRLWFAHMQEVKP 326
            SYM+DGQG+LI NRE V EDI+D EYTPK E+ G F + N  +E  LL  +F H++  KP
Sbjct: 284  SYMIDGQGFLITNREIVSEDIQDFEYTPKSEYHGPFMIFNEPDEKALLERFFEHIKIAKP 343

Query: 327  GIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDKNQGEC-RAKFACHLDCFAWVKRD 385
             + VTYNGD+FDWPF+E RA+  G  M +E+GF+  KN  +  ++ +  H+D FAWV RD
Sbjct: 344  TVMVTYNGDFFDWPFVEARASVQGIDMYQEIGFR--KNSEDIYQSDYCAHMDAFAWVSRD 401

Query: 386  SYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQMMASYSVSDAVATYYLYMTYV 445
            SYLPQGS+GLKAVT AKLGYDP E++PE M  +A E+PQ +A YSVSDAVATYYLYM YV
Sbjct: 402  SYLPQGSRGLKAVTMAKLGYDPDELDPELMTPYAAERPQTLAEYSVSDAVATYYLYMKYV 461

Query: 446  HPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVICPNKHQSDPEKFYRNHLLE 505
            HPFIF+L  I+P+ PD+ LRKG+GTLCEMLLMVQAY+  ++ PNKHQ+  E F+  HLLE
Sbjct: 462  HPFIFALCKILPLGPDDALRKGTGTLCEMLLMVQAYQKGIVLPNKHQAPKEAFWNGHLLE 521

Query: 506  SETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQLLNNLDRDLQYAIKVEGKMDLESVSN 565
            SETY+GGHVE LE+GVFRSD+  +F +DP+A ++L+ +LD  L+++I+VE K  +E V+N
Sbjct: 522  SETYVGGHVEALEAGVFRSDIAYNFAVDPTAIDELVGDLDAALKFSIEVEEKKKMEDVTN 581

Query: 566  YDEVKNAIMEKLLRLQEEPIREECPLIYHLDVAAMYPNIILTNRLQPPSIVTDEVCTACD 625
            YDEV+  I+ KL+ L+  P R E PLIYHLDVA+MYPNI+ TNRLQP S++ +  C ACD
Sbjct: 582  YDEVRAEIVNKLMELKNTPNRSERPLIYHLDVASMYPNIMTTNRLQPDSMINESNCAACD 641

Query: 626  FNRPGKTCLRKLEWVWRGEIFMGKRSDYYHLKKQIESEFVDGTNGHLSK-SFLDLPKMEQ 684
            FNRPGKTC R++ W WRGE    KR +Y  ++  +E+E   G   +  K SF +L + EQ
Sbjct: 642  FNRPGKTCDRRMPWAWRGEYLPAKRDEYNMVRNALENEQFPGRFPNSPKRSFQELSEDEQ 701

Query: 685  QSRLKDRLKKYCQKAYKRVLDKPVTELREAGICMRENSFYVDTVRSFRDRRYEYKGLNKV 744
             + ++ RL  Y +K Y +V D    E REA IC REN FYVDTV  FRDRRY++KG  KV
Sbjct: 702  AALVRKRLTDYSKKIYHKVHDATTIE-REAIICQRENPFYVDTVSGFRDRRYDFKGKQKV 760

Query: 745  WKGKLS-EAKASGNSIKIQEAQDMVVLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAG 803
            WKGK      A   + +I++A+ M+VL+DS+QLAHK ILNSFYGYVMRKG+RWYS+EMAG
Sbjct: 761  WKGKTEALKAAGAPAAEIEDAKKMIVLFDSMQLAHKVILNSFYGYVMRKGSRWYSLEMAG 820

Query: 804  VVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLPGSFPENFTFKTKDLKKKLTISYPC 863
            V   TGA+IIQ AR L+E+IG+PLELDTDGIW +LP +FPENF+FK  +  KKLTISYPC
Sbjct: 821  VTCLTGARIIQLARSLVERIGRPLELDTDGIWAILPATFPENFSFKLSN-GKKLTISYPC 879

Query: 864  VMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEFEVDGPYKAMILPASKEEGILIKK 923
             MLN  V    TN QY+TLVDPV+  YE HS+ SI FEVDGPYKAMILP SKEE   +KK
Sbjct: 880  TMLNHLVHAQYTNHQYETLVDPVNFRYEKHSDNSIFFEVDGPYKAMILPTSKEEDKNLKK 939

Query: 924  RYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFLHGSTIEECYSAVAAVANRWL 983
            RYAVFN DG+LAELKGFE+KRRGELKLIK FQA++F  FL G+T+EE Y AVA VANRWL
Sbjct: 940  RYAVFNHDGSLAELKGFEVKRRGELKLIKNFQAQIFKFFLEGTTLEETYGAVAKVANRWL 999

Query: 984  DLLDNQGKDIADSELIDYISESSTMSKSLADYGEQKSCAVTTARRLSDFLGDTMVKDKGL 1043
            D+LD +G  +AD ELID I E+ +M+K+L +YG QKS A+TTA+RL++FLG+ MVKDKGL
Sbjct: 1000 DILDTRGATLADEELIDLIVENKSMTKTLEEYGAQKSTAITTAKRLAEFLGEQMVKDKGL 1059

Query: 1044 RCQYIVACEPQGTPVSERAVPVAIFETDAEIMKFYLRKWCKT-SSDVGIRSIVDWSYYKQ 1102
             C+YI++  P+  PV+ERA+P++IF  +  + +++LRKW +    ++ IRS++DW YY++
Sbjct: 1060 NCKYIISKTPRNAPVTERAIPLSIFSAEESVKRYFLRKWLREDPGEMDIRSVLDWDYYRE 1119

Query: 1103 RLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLYKKVREKEDKFRQRKLVDIFSSLKKDDF 1162
            RL+S IQK+ITIPAA QKV NPVPRV HPDWL +++R+KEDK +Q K+ D+FS   K   
Sbjct: 1120 RLASVIQKLITIPAAYQKVRNPVPRVPHPDWLDRRIRQKEDKMQQTKMTDMFS---KKVL 1176

Query: 1163 LNKTCNAETNLMDENVEDLEDFPKKRRNSVNGPRPIVRCFEVNNEQKTVKTTDQVDSLRQ 1222
             N   N   N +  ++ED   F K  +N     + IV                ++ + R+
Sbjct: 1177 TNGDANVANNKVTGDLEDF-GFAKLTQNQSQMKKGIVT---------------KMVAKRK 1220

Query: 1223 QLEPSEVSDQQPSSQNAIDTENIDRIVDYKGWLELKKRKWKDNLDRRKKQKLGSLRASHQ 1282
            + EP+ V    P +       +ID   DY GWL  +K+KWK   + RK+++         
Sbjct: 1221 EPEPA-VPIVDPYAALPKVMPSIDE--DYSGWLVYQKQKWKIQREARKRRR--------- 1268

Query: 1283 ANGVSESLGDMINHKEAQRRTGVGSYFRRQETAMTRCHWQIIQLVPSSQSGVFLAWVVVE 1342
                      +   K       +GS+FR Q  ++    WQ++QL P+   G   A+V+++
Sbjct: 1269 ---------QLFGEKAVDASDAIGSFFRNQAQSLYISTWQLVQLRPTETPGEVRAFVLID 1319

Query: 1343 GIMVRIPITVPRLFYLNSKDPIVEKFPG---------RRVNKTLPHGRRSFNLIEVMIDE 1393
              +  + I VPR  YLN +    E  P          + VN TLP+G  S +L ++ + E
Sbjct: 1320 KKIHALKIIVPRQLYLNLRS---EDLPDVSISGCSVEKVVNHTLPNGHPSIHLFKLQMSE 1376

Query: 1394 DQFRKESKKLAALLADPEVE 1413
            + +  E+  ++AL     VE
Sbjct: 1377 ETYVHEADSISALFNHSSVE 1396



 Score =  248 bits (634), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 170/631 (26%), Positives = 307/631 (48%), Gaps = 71/631 (11%)

Query: 1408 ADPEVEVLGWQQNAAKIGMQRCAASSQWFNERISLARYAHI------------------- 1448
            +D ++  LGWQ   AK  +        W    + LARY  I                   
Sbjct: 1592 SDKQLPPLGWQSFIAKRLVGHYLDLGSWVAHLLELARYGDIPLCNLESNDPRFLIDVAYA 1651

Query: 1449 ---------LWISDDGVPDLGGTSEEDECFADE-VHQPVLTYPGAYRKVSVELKIHHLSV 1498
                     LW S    PD  G  ++D     E V  P +  PG Y  V +++ + +L++
Sbjct: 1652 RRLQKDRVILWWSGQAKPDHAGYEKDDVLGPLETVEMPSINNPGTYSSVCIDINLRNLAI 1711

Query: 1499 NALLKSNQVNEMEGGGLFGFDQDMNSGPYNNELCG--FDETTSSAPAFRVVKQLIQRCLT 1556
            N +L S+ +NE+EG     F+    S    N+     + +   ++    V++++++    
Sbjct: 1712 NTILSSSLINELEGADSVSFNPAAPSYDSANDGSNVIYSDNAFASAGITVLREMVKAWWV 1771

Query: 1557 DAVTSGNVF--ADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEFRKLGAT 1614
            +AV +G+ F  AD ++QHL RW+ SP S L+D  LH  +  + +K    L+ +F+++G+ 
Sbjct: 1772 EAVQAGHGFSMADVMVQHLVRWVSSPGSFLYDRSLHYYVQMMSKKTLQQLMTDFKRVGSH 1831

Query: 1615 IIFANFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLFMDQYNY 1674
            I+FA+ +++++ T K ++  A AY   ++K ++ + LF+++ELE   FW  L++ D++NY
Sbjct: 1832 IVFASPNRLLLQTTKAEIGNAYAYSQYIIKTIKAKPLFQFMELEIKEFWDYLVWYDEFNY 1891

Query: 1675 GGIPARADESLDDDSQ-VDIVSSWNIAEYLPKEIQDHFVLVVSEFMYIPWKHAQKLAASR 1733
            GG     D+  +D+ Q V+ +  W +A++LP++ Q  F   V EF  I   H++K     
Sbjct: 1892 GG--KGCDKVTEDEVQPVENIMCWQLAQFLPQKFQPTFNDWVIEF--IELMHSRKRP--- 1944

Query: 1734 ASLQEGSSCTPS------ITVAAAENFESHIVQYVK--GEISSYFTGKLLSIVRDAIHHM 1785
            A  ++GS+  P+      +TV   +  +     + K   +  + F  K  + V D +   
Sbjct: 1945 AITEDGSTPRPTQIPLRPLTVDPNDQTQILPKTFTKPLSKQMNAFAKKQHAEVLDPLFAS 2004

Query: 1786 KKMNNDQHNSPGVMQTAANIHKVDAPLEFIKHVCAAFALDQNVQHDVLVMRKNLLKYVRV 1845
            + +  +    PG     +++   +  L+ +K +    +LD+ +  +   +RK LL    +
Sbjct: 2005 EYVFPEL---PG-----SHLKLTNPVLQLVKSIMQVLSLDRAISLEARALRKELLNLFDI 2056

Query: 1846 REFAPEAEFRDPCPSFILPNVICSYCNDCRDLDLCRDMALLA-----QDWHCAMPQ---- 1896
            REF+ EA F +P  + ++  VIC  C   RDLDLCRD +LL       D    MP+    
Sbjct: 2057 REFSAEATFTNPSATLVVRGVICDDCTSSRDLDLCRDSSLLPVILPDSDSAPVMPKWKCD 2116

Query: 1897 -CGQPYDREVMENALLQIVRQRERLYHLQDLVCIRCNQVKAAHLAEQCACAGSFRCKEDA 1955
             C  PYD+  +E  L+  V++    +  QDL C +C ++++    E CACAG +   ++ 
Sbjct: 2117 NCDSPYDKRCIEEQLVGEVQKMVLEWCTQDLKCGKCKRLRSNEFMEHCACAGEWAPTKNK 2176

Query: 1956 SDFRSKMQIFLNIANRQGFQLL----QECTS 1982
            ++ + KM ++ N+A      +L    +EC S
Sbjct: 2177 AEIKKKMGVYGNVARFYTLGMLEAVVEECLS 2207


>gi|167518546|ref|XP_001743613.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163777575|gb|EDQ91191.1| predicted protein [Monosiga brevicollis MX1]
          Length = 2195

 Score = 1375 bits (3559), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 712/1413 (50%), Positives = 948/1413 (67%), Gaps = 60/1413 (4%)

Query: 25   EELEAKLGYDLFSEGDKRLGWLLTFASSSLEDEDTRKVYSCIDLYFVSQDGSTFKSKYKF 84
            ++L+ + G+D  +    +LGWL+    +S  D +T +V S +D YF+ +DG  FK+ Y +
Sbjct: 1    DKLDKRFGFDRPTGTADKLGWLINMQPTSFRDTETGQVKSAVDFYFLEEDGQRFKATYPY 60

Query: 85   RPYFYAATKEKMEMDVEAYLRRRYESQIADIEILEKEDLDLKNHLSGLHKSYLKISFDTV 144
             PYF    +   E +V+ YL+R+++  IA IE+++KEDLDL NHL GL + YLK++F+ V
Sbjct: 61   SPYFL--LRAGTEGEVDQYLKRKFDKHIAKIELVDKEDLDLDNHLIGLKQPYLKLTFNNV 118

Query: 145  QQLMDVKKDLLHVVERNQAK------FDAAEAYESILTGK---------REQRPQDFLDC 189
            Q L   K  +  ++++N+++      F  A+A  S  T +         R +   D +D 
Sbjct: 119  QDLQLTKSKISPIIKQNRSRQADEEHFAHAQALASSGTTEIDTVAKADERLKHVDDVMDS 178

Query: 190  IVDLREYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLLEKRVDLLQRAEVHVCAFDIETT 249
            ++++REYDVPYH+R  IDN +  G+WY V+I      + +R DLL   ++ V A+DIETT
Sbjct: 179  VLEMREYDVPYHMRVCIDNRIYVGKWYTVTIQGQQVHVSERADLLLMPDIKVLAWDIETT 238

Query: 250  KLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNVNN 309
            KLPLKFP+++ D IMMISYM+D QGYLIINRE V EDI D EYTPKPEF G+F+V N  N
Sbjct: 239  KLPLKFPNSEIDQIMMISYMIDNQGYLIINREIVSEDISDFEYTPKPEFPGHFEVFNCEN 298

Query: 310  EIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDKNQGECR 369
            E   +  +F H+Q  KP + VTYNGD FDWPFLE RA  +  +M  E+GF+ +  QGE  
Sbjct: 299  EHATIARFFEHIQSEKPHVMVTYNGDSFDWPFLERRAEINDMRMFYEIGFRPN-TQGEYL 357

Query: 370  AKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQMMASY 429
            ++FA HLDCF WVKRDSYLP GS GLKAVT+ KL YDPLE++ E++ R A E+PQ +A+Y
Sbjct: 358  SRFAPHLDCFRWVKRDSYLPVGSHGLKAVTREKLRYDPLEIHYEEICRMAAEQPQELANY 417

Query: 430  SVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVICPN 489
            SVSDAVATYYLY  YV PFIF+L TII + PD+VLRKGSGTLCE LLM  AY +N++ PN
Sbjct: 418  SVSDAVATYYLYKKYVQPFIFALCTIIALGPDDVLRKGSGTLCETLLMNNAYNSNIVMPN 477

Query: 490  KHQSDPEKFYRNHLLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQLLNNLDRDLQ 549
            K Q+D  K + NHLL SETYIGGHVE LESGVFRSD+P +FK+DP A ++L++NLD  L 
Sbjct: 478  KKQADVSKMHNNHLLASETYIGGHVEALESGVFRSDIPCNFKVDPEAVQKLIDNLDAALH 537

Query: 550  YAIKVEGKMDLESVSNYDEVKNAIMEKLLRLQEEPIREECPLIYHLDVAAMYPNIILTNR 609
            +AI  E K D +++ NYDEVK  ++ +L  L++ P R E PLIYHLDVAAMYPNIILTNR
Sbjct: 538  HAIVEEEKRDFDTIVNYDEVKAELVAQLEDLRDNPNRFEVPLIYHLDVAAMYPNIILTNR 597

Query: 610  LQPPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYYHLKKQIESEFVDGTN 669
            LQPP++V ++ C +C FN     C RK+ W+WRGE+    RS+Y   + Q ESE   G N
Sbjct: 598  LQPPAVVDEKTCASCAFNNEENRCKRKMTWMWRGEVSPAGRSEYLQQRMQAESETFPGEN 657

Query: 670  -GHLSKSFLDLPKMEQQSRLKDRLKKYCQKAYKRVLDKPVTELREAGICMRENSFYVDTV 728
             G   + F +L ++EQ + +K RL +Y +K YKR  D  + E R + +C REN FY++TV
Sbjct: 658  PGDPQRPFHELHELEQAAIIKKRLDEYSRKTYKRTKDT-IIEERVSTVCQRENPFYINTV 716

Query: 729  RSFRDRRYEYKGLNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHKCILNSFYGY 788
            RSFRDRRYEYKG  K  K  LS+ +ASG+  +I+   D+VVLYDSLQLAHKCILNSFYGY
Sbjct: 717  RSFRDRRYEYKGKLKDSKRLLSDVQASGDPAEIKRVSDLVVLYDSLQLAHKCILNSFYGY 776

Query: 789  VMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLPGSFPENFTF 848
            VMRKGARW+SMEMAGVV  TGA II  AR ++E++G+PLELDTDGIWC LPGSFPE FTF
Sbjct: 777  VMRKGARWFSMEMAGVVCLTGANIITKAREIVERLGRPLELDTDGIWCCLPGSFPEEFTF 836

Query: 849  KTKD--LKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEFEVDGPY 906
            KT D   K K+TISYP  MLN+ V +  TNDQYQ LVD  +  ++T  E SI FEVDGPY
Sbjct: 837  KTSDPGKKAKITISYPGAMLNIMVNQEFTNDQYQDLVDERNLIFKTKVENSIFFEVDGPY 896

Query: 907  KAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFLHGS 966
            KAMILPASKE+   +KKRYAVFN+DG+LAELKGFEIKR GELK+IK+FQ E+FD FL G+
Sbjct: 897  KAMILPASKEKDKRLKKRYAVFNEDGSLAELKGFEIKRNGELKIIKIFQKEVFDSFLLGN 956

Query: 967  TIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLADYGEQKSCAVTTA 1026
            ++EE Y+ VA VAN WLD+L   G+ + D EL D ISE+ +MS++LADYG QKS +++TA
Sbjct: 957  SLEEVYAHVADVANHWLDILYTHGEGLPDYELFDLISENRSMSRTLADYGTQKSTSISTA 1016

Query: 1027 RRLSDFLGDTMVKDKGLRCQYIVACEPQGTPVSERAVPVAIFETDAEIMKFYLRKWCKTS 1086
            +RL+ FLGD MVKDKGL CQ+I++ +P+GTPV+ERA+PV IF+ + ++ + YLR W K  
Sbjct: 1017 KRLAQFLGDEMVKDKGLACQFIISKKPEGTPVTERAIPVTIFQAEEQVKRHYLRLWTKEG 1076

Query: 1087 SDV---GIRSIVDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLYKKVREKED 1143
            + +    IR I+DW YY +RL SAIQKIITIPAAMQKV NPVPRV HPDWL K++ +K D
Sbjct: 1077 AGLESADIRDILDWDYYIERLGSAIQKIITIPAAMQKVENPVPRVQHPDWLQKRLLDKND 1136

Query: 1144 KFRQRKLVDIFSSLKKDDFLNKTCNAETNLMDENVEDLEDFPKKRRNSVNGPRPIVRCFE 1203
             ++QR +   FS+   ++    T  AET  +     D+ED   + R S N P+P      
Sbjct: 1137 IYKQRSIRSYFSAAPVEE-AQGTLEAETENLKPTAADIED---QFRMSEN-PKPKGPMIT 1191

Query: 1204 VNNEQKTVKTTDQVDSLRQQLEPSEVSDQQPSSQNAIDTENIDRIVDYKGWLELKKRKWK 1263
            V   +K       V+   Q  +  EV  ++ S          D   DY  WL+ +KRKW 
Sbjct: 1192 VTRRKKLRNKMVSVNEQVQAGDWREVMAEETSG---------DPAEDYPAWLKYQKRKWS 1242

Query: 1264 -DNLDRRKKQKLGSLRASHQANGVSESLGDMINHKEAQRRTGVGSYFRRQETAMTRCHWQ 1322
                +R++K+ LG    +  A+G S +L   +  K              QE A+   HWQ
Sbjct: 1243 IQRAERKRKRSLGISMTTAVASGDSVALSRYVAGK--------------QEAAIVN-HWQ 1287

Query: 1323 IIQLVPSSQSGVFLAWVVVEGIMVRIPITVPRLFYLN--SKDPIVEKFPGRRVNKTLPHG 1380
            IIQ+  +S  G+F  W +V+G +  + + VPR FY+N   +DP  +     +V++ LP  
Sbjct: 1288 IIQIANTSTPGIFKLWCLVDGGLHAMRLNVPRRFYVNMHEEDPTKKHI---KVSRQLPRS 1344

Query: 1381 RRSFNLIEVMIDEDQFRKESKKLAALLADPEVE 1413
                 L +  + E Q+ ++ K+LA+ L+  +VE
Sbjct: 1345 HPCKFLYQFEMTETQYLRDQKRLASQLSHSDVE 1377



 Score =  305 bits (781), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 194/635 (30%), Positives = 309/635 (48%), Gaps = 81/635 (12%)

Query: 1417 WQQNAAKIGMQRCAASSQWFNERISLARYAH----------------------------I 1448
            W+++  +  + R A   + F +RI +ARYA                             +
Sbjct: 1569 WRRSTVQTALHRYAKCHEIFQDRIEIARYAQAPVGNIPSDFQPFIHDLFFARQLQQHNFV 1628

Query: 1449 LWISDDGVPDLGGTSEEDE--CFADEVHQPVLTYPGAYRKVSVELKIHHLSVNALLKSNQ 1506
            LW+S    PDLGG +++D      DE     +  PG Y    VEL++ HL + A+L+   
Sbjct: 1629 LWMSPSTRPDLGGKAQDDNRLMLDDEQDAYAMNQPGFYDTCCVELEVMHLPICAVLQYAT 1688

Query: 1507 VNEMEGGGLFG-FD-------QDMNSGPYNNELCGFDETTSSAPAFRVVKQLIQRCLTDA 1558
            +++    G+   FD        DM +G  +  L  FDET    PAFRV+K L+   L + 
Sbjct: 1689 LSDEGSLGITSNFDTVTDTSLHDMMTGA-SAALTSFDETAQCFPAFRVLKSLVGAWLNEV 1747

Query: 1559 VTSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEFRKLGATIIFA 1618
             +   V AD  LQH YRWL +P S L+DP L R +  +M+K+F  L+   ++LG  +++A
Sbjct: 1748 ASRYEVMADGQLQHFYRWLKNPMSMLYDPALLRTVRDLMKKLFLHLITHVKRLGNELVYA 1807

Query: 1619 NFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLFMDQYNYGGIP 1678
            +F+++I+ T K D+  AKA+ D +L  L    LF  + L P   W  LL+MD  N+GGI 
Sbjct: 1808 SFNRMILKTAKSDVPQAKAHIDYVLSVLSQNNLFAVLTLAPQRAWSQLLWMDAMNFGGID 1867

Query: 1679 ARA--------------------DESL-DDDSQVDIVSSWNIAEYLPKE-IQDHFVLVVS 1716
            A++                    D +L DD+  + +V ++NI +YLP + +Q  F L +S
Sbjct: 1868 AQSETRPVLEDDEDGAPSERDGVDTALSDDEGGMSVVRNFNIQQYLPVDRVQHLFALTIS 1927

Query: 1717 EFMYIPWKHAQKLAASRASLQEGSSCTPSITVAAAENFESHIVQYVKGEISSYFTGKLLS 1776
             F+Y+ ++  Q     R+S +E       +  A+     + +    K   S   T +  +
Sbjct: 1928 MFLYLTYEARQNDLHRRSSAREQRLREAELMTAS--QIRAEVADQNKDVTSE--TKRCEA 1983

Query: 1777 IVRDAIHHMKKMNNDQHNSPGVMQTAANIHKVDAP-LEFIKHVCAAFALDQNVQHDVLVM 1835
              RDA           H S      A +   +  P LEFIK+ C   ++D+  + D   +
Sbjct: 1984 KPRDA--------QPGHQSRHFPHLAGSHLPLQNPALEFIKYTCHLLSMDKAHKGDYERL 2035

Query: 1836 RKNLLKYVRVREFAPEAEFRDPCPSFILPNVICSYCNDCRDLDLCRDMALL-----AQDW 1890
            +++LL+ +  REFA E+ FR+PC S  LP  +C++CN   DL+LC D  +      A +W
Sbjct: 2036 KRDLLRMINKREFAAESAFRNPCMSLTLPQFVCAHCNLYDDLNLCDDEVVTKRSDGASNW 2095

Query: 1891 HCAMPQCGQPYDREVMENALLQIVRQRERLYHLQDLVCIRCNQVKAAHLAEQCACAGSFR 1950
             C   +C   ++RE +E  LL + RQ    Y LQDL C++C  +K  HL+  C+CAG++ 
Sbjct: 2096 VCL--RCQHQHNREEIEQQLLSVARQALMAYQLQDLRCLKCKLIKGDHLSRHCSCAGAYA 2153

Query: 1951 CKEDASDFRSKMQIFLNIANRQGFQLLQECTSWIL 1985
              E +   ++K+    N+A     + LQE   W L
Sbjct: 2154 LTEPSERLQTKLHTLFNVAKYHQLKFLQEELEWNL 2188


>gi|115384712|ref|XP_001208903.1| hypothetical protein ATEG_01538 [Aspergillus terreus NIH2624]
 gi|114196595|gb|EAU38295.1| hypothetical protein ATEG_01538 [Aspergillus terreus NIH2624]
          Length = 2206

 Score = 1373 bits (3554), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 715/1419 (50%), Positives = 949/1419 (66%), Gaps = 85/1419 (5%)

Query: 15   KKQKLIRSAEEELEAKLGYDLFSEGDKRLGWLLTFASSSLEDEDTRKVYSCIDLYFVSQD 74
            +K + IR A    EA LG+  F  G+KR+GWL+   S+S+ED +     + +D YF+  D
Sbjct: 43   EKFEAIRLANSIDEA-LGFPRFESGEKRVGWLINMHSTSIEDPNVPGGRAGVDYYFLDDD 101

Query: 75   GSTFKSKYKFRPYFYAATKEKMEMDVEAYLRRRYESQIADIEILEKEDLDLKNHLSGLHK 134
            G +FK+  ++ PYF  A K+  EM+VE + RR YE  I  I  +E+EDL + NHL G  +
Sbjct: 102  GGSFKATVEYDPYFLIAVKKGYEMEVEEWCRRMYEGLIKKISRVEREDLKMPNHLLGHRR 161

Query: 135  SYLKISFDTVQQLMDVKKDLLHVVERNQAKFDAAEAYESILTGKREQRPQDFLDCIVDLR 194
            ++L+++F  V  L++V+K LL + E+N+                R        D I+D+R
Sbjct: 162  TFLQLNFANVGHLLEVRKSLLPLAEKNKK-------------NSRSNGNMQASDFIIDIR 208

Query: 195  EYDVPYHIRFAIDNDVRCGQWYDVS-----ISSTGPLLEKRVDLLQRAEVHVCAFDIETT 249
            EYDVPYH+R AID D+R G+WY V      IS T   LE+RV   QR +  V AFDIETT
Sbjct: 209  EYDVPYHVRVAIDKDIRIGKWYTVEAKHGVISLT--CLEERV---QRPDPVVLAFDIETT 263

Query: 250  KLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNVNN 309
            KLPLKFPD+  D IMMISYM+DGQG+LI NRE V EDI D EYTPKPE+ G F + N  +
Sbjct: 264  KLPLKFPDSVIDQIMMISYMIDGQGFLITNREIVSEDINDFEYTPKPEYSGPFMIFNEPD 323

Query: 310  EIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDKNQGECR 369
            E  ++  +F H++E KP +  TYNGD+FDWPF+E RA+  G  M  E+GF+  KN  +  
Sbjct: 324  ERSVIERFFQHIKEAKPTVIATYNGDFFDWPFVEARASVLGIDMYTEIGFR--KNSEDIY 381

Query: 370  AKFAC-HLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQMMAS 428
                C H+DCFAWV RDSYLPQGS+GLKAVT AKLGYDP E++PE M  +A E+PQ +A 
Sbjct: 382  QSDHCVHMDCFAWVNRDSYLPQGSRGLKAVTVAKLGYDPDELDPELMTPYASERPQTLAE 441

Query: 429  YSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVICP 488
            YSVSDAVATYYLYM YVHPFIFSL TI+P++PD+ LRKG+GTLCEMLLMVQAYK  +I P
Sbjct: 442  YSVSDAVATYYLYMKYVHPFIFSLCTIVPLNPDDTLRKGTGTLCEMLLMVQAYKGEIILP 501

Query: 489  NKHQSDPEKFYRNHLLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQLLNNLDRDL 548
            NKH+  PE FY  HLLESETY+GGHVE +E+GVFRSD+P +FK+DP+A ++LL +LD  L
Sbjct: 502  NKHKDPPEAFYEGHLLESETYVGGHVESIEAGVFRSDIPVTFKIDPTAIDELLRDLDAAL 561

Query: 549  QYAIKVEGKMDLESVSNYDEVKNAIMEKLLRLQEEPIREECPLIYHLDVAAMYPNIILTN 608
             ++I VE K  ++ V NYDEVK  I + L+ L++ P R+E P IYHLDVA+MYPNI++TN
Sbjct: 562  TFSITVEEKKSMDDVVNYDEVKAQIAKLLIDLRDNPNRDENPFIYHLDVASMYPNIMVTN 621

Query: 609  RLQPPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYYHLKKQIESE-FVDG 667
            RLQP S++ +  C ACDFNRPGK C R++ W WRGE    KR +Y  +++ + +E F   
Sbjct: 622  RLQPDSMIEESNCAACDFNRPGKNCDRRMPWAWRGEFLPAKRDEYNMIRQAVANERFPGK 681

Query: 668  TNGHLSKSFLDLPKMEQQSRLKDRLKKYCQKAYKRVLDKPVTELREAGICMRENSFYVDT 727
            T     +SF D+   EQ   +K RL+ Y +K Y ++ D   T +REA IC REN FYV+T
Sbjct: 682  TKNSPMRSFSDMSIEEQAGIIKKRLQDYSKKIYHKIHDSK-TIVREAIICQRENPFYVNT 740

Query: 728  VRSFRDRRYEYKGLNKVWKGKLSEAKASGNS-IKIQEAQDMVVLYDSLQLAHKCILNSFY 786
            VRSFRDRRY++KG  KVWKGK    KASG S  +I+EA+ M++L+DSLQLAHK ILNSFY
Sbjct: 741  VRSFRDRRYDFKGQQKVWKGKTESLKASGASAAEIEEAKKMIILFDSLQLAHKVILNSFY 800

Query: 787  GYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLPGSFPENF 846
            GYVMRKG+RWYS+EMAGV   TGA+IIQ AR L+E+IG+PLELDTDGIWC+LPG+FPENF
Sbjct: 801  GYVMRKGSRWYSLEMAGVTCLTGARIIQMARELVERIGRPLELDTDGIWCMLPGTFPENF 860

Query: 847  TFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEFEVDGPY 906
            +F  K+  KKL ISYPCVMLN  V  + TN QYQTLVDP +  Y+T SE SI FEVDGPY
Sbjct: 861  SFTLKN-GKKLGISYPCVMLNHLVHGSYTNHQYQTLVDPQTFRYQTDSENSIFFEVDGPY 919

Query: 907  KAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFLHGS 966
            KAMILP SKEE   +KKRYAVFN DG+LAELKGFE+KRRGELKLIK+FQ ++F  FL G 
Sbjct: 920  KAMILPTSKEEDKNLKKRYAVFNHDGSLAELKGFEVKRRGELKLIKIFQTQIFKFFLEGK 979

Query: 967  TIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLADYGEQKSCAVTTA 1026
            T+ E Y+AVA VA+RWLD+L   G  +AD ELI+ ISE+ +M+K+L +YG QKS ++TTA
Sbjct: 980  TLAETYAAVARVADRWLDVLYEHGSTLADEELIELISENRSMTKTLEEYGNQKSTSITTA 1039

Query: 1027 RRLSDFLGDTMVKDKGLRCQYIVACEPQGTPVSERAVPVAIFETDAEIMKFYLRKWCK-T 1085
            RRL++FLG+ MVKDKGL C+YI++  P+ TPV+ERA+PVAIF  +  + +F+LRKW K  
Sbjct: 1040 RRLAEFLGEQMVKDKGLNCKYIISARPRNTPVTERAIPVAIFSAEENVKRFFLRKWLKDD 1099

Query: 1086 SSDVGIRSIVDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLYKKVREKEDKF 1145
              D+  R+++DW YY +RL S +QK+ITIPAA+QK+ NPVPRV HPDWL +++  K+D+F
Sbjct: 1100 PGDMDPRTVIDWDYYMERLGSVVQKLITIPAALQKIRNPVPRVAHPDWLQRRINMKDDRF 1159

Query: 1146 RQRKLVDIFSSLKKDDFLNKTCNAETNLMDENVEDLEDFPKKRRNSVN----GPRPIVRC 1201
            +Q K+ D+F+   K    N   +  TN++D  V+   D  +   NS       P P    
Sbjct: 1160 KQIKMTDVFTKADK----NPLSDISTNILDHRVQHPGDLDEALANSTAPEKLKPSP---- 1211

Query: 1202 FEVNNEQKTVKTTDQVDSLRQQLEP-SEVSDQQPSSQNAIDTENIDRIVDYKGWLELKKR 1260
                N + + K        +  L+P + +  + PS              DY G+L+ +K+
Sbjct: 1212 ----NSKASQKRKLPEGHTKTSLDPFASLPSKMPSMAE-----------DYVGFLKYQKQ 1256

Query: 1261 KWKDNLD-RRKKQKLGSLRASHQANGVSESLGDMINHKEAQRRTGVGSYFRRQETAMTRC 1319
            KWK     R ++++L   RA+        + GD ++H            FR Q   +   
Sbjct: 1257 KWKIQKQARTRRRQLFGERAN--------ASGDSLSH-----------LFRNQAELLYIS 1297

Query: 1320 HWQIIQLVPSSQSGVFLAWVVVEGIMVRIPITVPRLFYLNSK-----DPIVEKFPGRRVN 1374
             WQ++QL  +S+ GV  A+V+++  +  + + VPR  Y+N K     D  +      +VN
Sbjct: 1298 TWQVLQLAETSRPGVVRAFVLIDRKVHTLTVRVPRQIYVNLKQDSLPDVDIPDCEVEKVN 1357

Query: 1375 KTLPHGRRSFNLIEVMIDEDQFRKESKKLAALLADPEVE 1413
             TLP+G  S +L ++ + ED + +E +K+  L   P VE
Sbjct: 1358 HTLPNGHPSVHLFKLTLSEDTYLRELEKIDILFQHPSVE 1396



 Score =  241 bits (614), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 168/629 (26%), Positives = 296/629 (47%), Gaps = 64/629 (10%)

Query: 1407 LADPEVEVLGWQQNAAKIGMQRCAASSQWFNERISLARYAHI------------------ 1448
            ++D ++  LGWQ   A+  +      S W      LARY  +                  
Sbjct: 1591 VSDMDLPPLGWQSFIARRLITHYLYLSSWIQHLTLLARYGDVPLCNLESDDPRYLIDISY 1650

Query: 1449 ----------LWISDDGVPDLGGTSEEDECFA-DEVHQPVLTYPGAYRKVSVELKIHHLS 1497
                      LW S    PD  G  ++D     ++V  P +  P AY  V +E+++ +L+
Sbjct: 1651 ARRLQQNNVVLWWSSGPRPDHAGYEKDDITGPLEKVAMPSVNVPSAYTTVCLEIEVRNLA 1710

Query: 1498 VNALLKSNQVNEMEGGGLFGFDQDMNSGPYNNELCGFDETTSSAPAFRVVKQLIQRCLTD 1557
            +N +L S+ ++EMEG          ++ P  + +   ++  +SA A  V++++++   T+
Sbjct: 1711 INTILTSSIISEMEGTDSLLASSGSSADPSGSGVLYSEKAFASASAV-VLREMVKHWWTE 1769

Query: 1558 AVTSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEFRKLGATIIF 1617
            A   GN  AD ++QHL RW+ S  S L+D  LH  +  + +K F  L+AEFR++G+ ++F
Sbjct: 1770 AC-EGNSMADIMVQHLIRWVESSSSCLYDRSLHHYVRMLSRKSFQRLMAEFRRVGSNVVF 1828

Query: 1618 ANFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLFMDQYNYGGI 1677
            A+ +++++ T K ++  A AY   +LK+L+    F +I+LE   +W  L++ D+YNYGG 
Sbjct: 1829 ASSTRLLLQTTKSEVGNAYAYSQYVLKSLRANPSFHFIDLEIKEYWDYLVWYDEYNYGGK 1888

Query: 1678 PARADESLDDDSQVDIVSSWNIAEYLPKEIQDHFVLVVSEFMYI--PWKHAQKLAASRAS 1735
              R +    DD +++ V  W +  +LP  +Q  F   V E++ +    KH +   +S   
Sbjct: 1889 GCR-EVVGSDDQELETVMHWQLNRFLPTPMQTIFNDWVVEYIELMHSLKHPETDDSSTPR 1947

Query: 1736 LQEGSSCTPS------ITVAAAENFESHIVQYVKGEISSYFTGKLLSIVRDAIHHMKKMN 1789
            + +     P+      I+   AE F   + + + G         L+   R+ + H +  +
Sbjct: 1948 MTQIPIGRPNDEDSEEISAVLAEKFSKPLKKQISG---------LIRRQREEMLHPELAS 1998

Query: 1790 NDQHNS-PGVMQTAANIHKVDAPLEFIKHVCAAFALDQNVQHDVLVMRKNLLKYVRVREF 1848
            +      PGV+    N  K +  LE +K +    +L +    +  ++R+ LL    VREF
Sbjct: 1999 DYAFPVLPGVL-ADPNSDKRNPVLELVKLLMQVLSLSKTTTLESRLLRRELLAMFEVREF 2057

Query: 1849 APEAEFRDPCPSFILPNVICSYCNDCRDLDLCRDMALL-----------AQDWHCAMPQC 1897
            + E  F +P  S  LP V C  C   RDLDLCRD  +L            + W C  P C
Sbjct: 2058 SKEGRFENPAASLKLPEVTCGACCLIRDLDLCRDEDVLPDVGSDTSKAVTKPWRC--PFC 2115

Query: 1898 GQPYDREVMENALLQIVRQRERLYHLQDLVCIRCNQVKAAHLAEQCACAGSFRCKEDASD 1957
               YDR   E  L+  V+     +  QDL C +C  +K +   E C+C+G++    + +D
Sbjct: 2116 QTEYDRLAQEELLIGQVQGLVVGWQTQDLKCSKCGGLKISDFMEHCSCSGTWVETTNRAD 2175

Query: 1958 FRSKMQIFLNIANRQGFQLLQECTSWILE 1986
               ++++  ++A     +LL+     +L+
Sbjct: 2176 IEKRLRVLESVAKFHNLKLLESVVEGVLQ 2204


>gi|449304207|gb|EMD00215.1| hypothetical protein BAUCODRAFT_30681 [Baudoinia compniacensis UAMH
            10762]
          Length = 2235

 Score = 1373 bits (3553), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 704/1412 (49%), Positives = 939/1412 (66%), Gaps = 77/1412 (5%)

Query: 32   GYDLFSEGDKRLGWLLTFASSSLEDEDTRKVYSCIDLYFVSQDG-STFKSKYKFRPYFYA 90
            G++ F  G  R+GWL+   S++LED       + +D YF+ +DG   FK+  ++ PYF  
Sbjct: 58   GFERFEAGKPRVGWLMNMHSTTLEDAKVPGGRAAVDFYFIGEDGQGRFKASVEYDPYFLL 117

Query: 91   ATKEKMEMDVEAYLRRRYESQIADIEILEKEDLDLKNHLSGLHKSYLKISFDTVQQLMDV 150
            A K+  E +VE ++RR +E  + +++ +EKEDL + NHL G  +++L+++F  V  L+ V
Sbjct: 118  AVKKGKEPEVEEWVRRTFEGSVKNVKRVEKEDLKMPNHLLGYRRTFLRLAFANVNDLLSV 177

Query: 151  KKDLLHVVERNQAKFDAAEAY--------------ESILTGKREQRPQDFLDCIVDLREY 196
            +K +L + E+N++     + Y              E+ L  +R     D  D I+D+REY
Sbjct: 178  RKVVLPIAEKNRSNVSPMDTYAEVASANAGFDLFDEAHLDDRRPTTLADASDFILDIREY 237

Query: 197  DVPYHIRFAIDNDVRCGQWYDVSISSTGPLLEKRVDLLQRAEVHVCAFDIETTKLPLKFP 256
            DVPYH+R A+D DVR G+WY V        +    + L RA+  V AFDIETTKLPLKFP
Sbjct: 238  DVPYHVRVAVDLDVRVGKWYTVEAKHGHVSVSCIEERLTRADPIVMAFDIETTKLPLKFP 297

Query: 257  DADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNVNNEIELLRL 316
            DA  D +MMISYM+DGQG+LI NRE V EDI+D +YTPKPEF+G F + N  NE  +L  
Sbjct: 298  DASIDQVMMISYMIDGQGFLITNREIVSEDIQDFDYTPKPEFDGPFLIFNEPNEEAVLER 357

Query: 317  WFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDKNQGECRAKFAC-H 375
            +F  ++E +P I  TYNGD+FDWPF+E RA+ HG  M +E+GF+  KN  +      C H
Sbjct: 358  FFDCIKEARPTIIATYNGDFFDWPFVEARASVHGIDMYQEIGFR--KNNDDVYQSTHCAH 415

Query: 376  LDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQMMASYSVSDAV 435
            +D FAWV RDSYLPQGS+GLKAVT AKLGYDP E++PE M  +A E+PQ++A YSVSDAV
Sbjct: 416  MDAFAWVNRDSYLPQGSRGLKAVTVAKLGYDPDELDPELMTPYAAERPQVLAEYSVSDAV 475

Query: 436  ATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVICPNKHQSDP 495
            ATYYLYM YVHPFIFSL TIIP+ PD+VLRKG+GTLCEMLL VQAY+  ++ PNKH    
Sbjct: 476  ATYYLYMKYVHPFIFSLCTIIPLGPDDVLRKGTGTLCEMLLCVQAYQKEIVLPNKHVQPR 535

Query: 496  EKFYRNHLLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQLLNNLDRDLQYAIKVE 555
            E F+  HLLESETY+GGHVE +E+GVFRSD+P +F +D +A ++LLN+LD  L ++I VE
Sbjct: 536  ESFWEGHLLESETYVGGHVESIEAGVFRSDIPCNFAIDTTAVDELLNDLDAALIFSITVE 595

Query: 556  GKMDLESVSNYDEVKNAIMEKLLRLQEEPIREECPLIYHLDVAAMYPNIILTNRLQPPSI 615
             K  +E ++NYDEVK  I ++L +L+  P R+E P IYHLDVA+MYPNI+ TNRLQP S+
Sbjct: 596  EKKQMEDIANYDEVKAQIADRLNQLKITPNRQEKPSIYHLDVASMYPNIMTTNRLQPDSM 655

Query: 616  VTDEVCTACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYYHLKKQIESEFVDGTNGH-LSK 674
            + +  C ACDFNRPGKTC R++ W WRGE    KR +Y  ++  +E+E     N + L++
Sbjct: 656  IDESACAACDFNRPGKTCDRRMPWSWRGEFLPAKRDEYNMIRHALENEKFPAKNPNGLAR 715

Query: 675  SFLDLPKMEQQSRLKDRLKKYCQKAYKRVLDKPVTELREAGICMRENSFYVDTVRSFRDR 734
            +F DL   EQ   +K RL  Y +K Y ++ D    E REA IC REN FYVDTV +FRDR
Sbjct: 716  AFQDLSLDEQTGMVKKRLTDYSKKIYHKIHDARTLE-REAIICQRENPFYVDTVVNFRDR 774

Query: 735  RYEYKGLNKVWKGKLSEAKASGNSI-KIQEAQDMVVLYDSLQLAHKCILNSFYGYVMRKG 793
            RY++KG  KVWKGK +E + +G S  +I+EA+ MVVL+DSLQLAHK ILNSFYGYVMRKG
Sbjct: 775  RYDFKGKQKVWKGKTAELEKAGASQGEIEEAKKMVVLFDSLQLAHKVILNSFYGYVMRKG 834

Query: 794  ARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLPGSFPENFTFKTKDL 853
            +RWYSMEMAGV   TGA+IIQ AR L+E++G+PLELDTDGIWC+LP +FPENF F  K+ 
Sbjct: 835  SRWYSMEMAGVTCLTGARIIQMARQLVERVGRPLELDTDGIWCILPATFPENFAFTLKN- 893

Query: 854  KKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEFEVDGPYKAMILPA 913
             KKLTISYPCVMLN  V    TN QYQTL DP    YETHS+ +I FEVDGPYKAMILP 
Sbjct: 894  GKKLTISYPCVMLNHLVHARFTNHQYQTLADPNMFRYETHSDNTIFFEVDGPYKAMILPT 953

Query: 914  SKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFLHGSTIEECYS 973
            SKEE   +KKRYAVFN DGTLAELKGFE+KRRGELKLIK+FQ ++F  FL GST+ E Y+
Sbjct: 954  SKEEDKNLKKRYAVFNHDGTLAELKGFEVKRRGELKLIKIFQQQIFKFFLEGSTLTETYA 1013

Query: 974  AVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLADYGEQKSCAVTTARRLSDFL 1033
            AVA VA++WLD+L + G  +AD +LID I E+ +M+K+L +YG QKS A+TTA+RL++FL
Sbjct: 1014 AVAKVADKWLDVLHSHGATLADEDLIDLICENKSMAKTLEEYGSQKSTAITTAKRLAEFL 1073

Query: 1034 GDTMVKDKGLRCQYIVACEPQGTPVSERAVPVAIFETDAEIMKFYLRKWCK--TSSDVGI 1091
            G+ M+KDKGL C+YI+A  P+  PV++RA+PVAIF  +  I +FYLRKW +   S D+  
Sbjct: 1074 GEQMIKDKGLNCKYIIASRPKNAPVTDRAIPVAIFSAEESIKRFYLRKWMRGDPSDDMDP 1133

Query: 1092 RSIVDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLYKKVREKEDKFRQRKLV 1151
            R I+DW YY +RL S IQK+ITIPAA+QKV NPVPRV HPDWL +++R KED  +Q+K+ 
Sbjct: 1134 RDIIDWEYYLERLGSVIQKLITIPAALQKVKNPVPRVAHPDWLDRRIRTKEDVMKQKKMT 1193

Query: 1152 DIFSSLKKDDFLNKTCNAETNLMDENVEDLEDFPKKRRNSVNGPRPIVRCFEVNNEQKTV 1211
            D+F   +K     +  N  T  +     D+EDF         G  P+ +  +     + V
Sbjct: 1194 DLF---QKAPLAERHPNTLTQRLGGG--DIEDF---------GATPMSK-LKPATAARIV 1238

Query: 1212 KTTDQVDSLRQQLEPSEVS----DQQPSSQNAIDTENIDRIVDYKGWLELKKRKWKDNLD 1267
            K   +    R+ +EP+  +    D  P++  +I TE      DYKGWL+ +K+KWK    
Sbjct: 1239 KAQARK---RKAVEPAPATVDPYDSLPATMPSI-TE------DYKGWLKYQKKKWKIQKA 1288

Query: 1268 RRKKQKLGSLRASHQANGVSESLGDMINHKEAQRRTGVGSYFRRQETAMTRCHWQIIQLV 1327
             RK+++                   +   K       +G++FR+Q   +    WQI+QL 
Sbjct: 1289 ARKRRR------------------QLFGEKRGDATDAIGTFFRQQAELVYTSDWQILQLR 1330

Query: 1328 PSSQSGVFLAWVVVEGIMVRIPITVPRLFYLNSK-----DPIVEKFPGRR-VNKTLPHGR 1381
             +   G   A+V+++  +  + + VPR  +LN K     D  VE     + VN TLP+G 
Sbjct: 1331 ETETPGEVRAFVLIDKKVHHLKVIVPRQVFLNLKEDELPDVEVEGVKAEKVVNWTLPNGH 1390

Query: 1382 RSFNLIEVMIDEDQFRKESKKLAALLADPEVE 1413
             S +L ++ + E  + +E+ KL  L   P VE
Sbjct: 1391 PSKHLFKLSMSEHTYVQEAAKLRRLFEHPSVE 1422



 Score =  217 bits (552), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 153/623 (24%), Positives = 284/623 (45%), Gaps = 56/623 (8%)

Query: 1409 DPEVEVLGWQQNAAKIGMQRCAASSQWFNERISLARYAHI-------------------- 1448
            D  +  LGWQ   AK  +        W +  +  ARY ++                    
Sbjct: 1620 DKALPPLGWQSFVAKRLVSHYLDLGTWISHLVEFARYGNVPLCNLEKDDPRFLIDITYAR 1679

Query: 1449 --------LWISDDGVPDLGGTSEEDECFADEV-HQPVLTYPGAYRKVSVELKIHHLSVN 1499
                    LW S    PD  G  ++D   + EV   P +  PG Y  V ++L I +L++N
Sbjct: 1680 RLQKERVVLWWSQGARPDHAGHEKDDILSSMEVVDTPAVNNPGTYSSVCIDLSIKNLAIN 1739

Query: 1500 ALLKSNQVNEMEGG---GLFGFDQDMNSGPYNNELCGFDETTSSAPAFRVVKQLIQRCLT 1556
             +L +  +N++E     G+ G     ++     ++   +   +SA     ++++++    
Sbjct: 1740 TILSAAVLNDVEDSDPIGISGASAKEDTLEDATQVVASENAFASA-GINALREMLRVWWQ 1798

Query: 1557 DAVT--SGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEFRKLGAT 1614
            +A    SGN  AD ++ HL RW+ SP S L+D  L   +  + +K F  L++EFR++G+ 
Sbjct: 1799 EACNNNSGNTMADVLVMHLVRWVESPSSHLYDRNLLYYVQMMSRKAFQQLMSEFRRVGSH 1858

Query: 1615 IIFANFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLFMDQYNY 1674
            ++FAN  ++++ T K ++  A AY   +LK++ ++  F +++L    +W  L++ D++NY
Sbjct: 1859 VVFANAGRLLLQTSKAEVGNAYAYSQYILKSIASKPAFHFLDLAITEYWDYLVWYDEFNY 1918

Query: 1675 GGIPARADESLD-DDSQVDIVSSWNIAEYLPKEIQDHFVLVVSEFMYIPWKHAQKLAASR 1733
            GG      E ++ ++ ++D +  W +A +LP  +Q +F   + E  YI   H +K  A  
Sbjct: 1919 GG--KGCTEVVEVEEQRLDTIMHWQMATFLPPILQPNFNAWIVE--YIELMHQRKRPAGA 1974

Query: 1734 ASLQEGSSCTPSITVAAAENFESHIVQYVKGEI-SSYFTGKLLSIVRDAIHHMK--KMNN 1790
             +   G   T  + + A+        Q   G + +  F+  L   +   I   +   ++ 
Sbjct: 1975 VN---GVQRTTQLPMHASALDSEKDDQTTPGTVLAKTFSKPLQKQIAQLIRRQRTESLHE 2031

Query: 1791 DQHNS---PGVMQTAANIHKVDAPLEFIKHVCAAFALDQNVQHDVLVMRKNLLKYVRVRE 1847
            D       P +  +  N+   +  LE +K +    +LD+ +  +  ++RK LL    +RE
Sbjct: 2032 DLAGDWRFPAMPGSHLNLQ--NPVLELVKSIMQVLSLDKTITLEARLLRKELLHLFEIRE 2089

Query: 1848 FAPEAEFRDPCPSFILPNVICSYCNDCRDLDLCRDMAL-----LAQDWHCAMPQCGQPYD 1902
            F+ E  F +P  S  L  + C+ C   RD+DLCRD  L     L +        CG  +D
Sbjct: 2090 FSAEGSFANPSTSLTLKQLSCAECTIPRDIDLCRDSDLSHTDDLQRTLVAKCSNCGATFD 2149

Query: 1903 REVMENALLQIVRQRERLYHLQDLVCIRCNQVKAAHLAEQCACAGSFRCKEDASDFRSKM 1962
            R  +E  LL  V++    +  QDL C +C ++++    + CACAG +       D    +
Sbjct: 2150 RLAIEERLLADVQKVVLQWMTQDLKCKKCARIRSNEFMDHCACAGEWTTSMKRDDVVRLL 2209

Query: 1963 QIFLNIANRQGFQLLQECTSWIL 1985
            ++   +A   G ++L    + ++
Sbjct: 2210 RVHEKVATFYGLRMLDGVLTGVM 2232


>gi|295659964|ref|XP_002790539.1| DNA polymerase epsilon catalytic subunit A [Paracoccidioides sp.
            'lutzii' Pb01]
 gi|226281414|gb|EEH36980.1| DNA polymerase epsilon catalytic subunit A [Paracoccidioides sp.
            'lutzii' Pb01]
          Length = 2231

 Score = 1372 bits (3551), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 703/1426 (49%), Positives = 953/1426 (66%), Gaps = 79/1426 (5%)

Query: 15   KKQKLIRSAEEELEAKLGYDLFSEGDKRLGWLLTFASSSLEDEDTRKVYSCIDLYFVSQD 74
            +K K +R A    EA +G+  F  G+ R+GWL+   S+ +ED       + ++ YF+  +
Sbjct: 43   EKFKAVRLANSIDEA-MGFSRFESGNSRVGWLINMHSTIIEDPKVPGGRAGVEYYFLEDN 101

Query: 75   GSTFKSKYKFRPYFYAATKEKMEMDVEAYLRRRYESQIADIEILEKEDLDLKNHLSGLHK 134
            G++FK+  ++ PYF  ATK   E +VE + +R +E  +  ++ +EKEDL + NHL G  +
Sbjct: 102  GTSFKAIVEYDPYFLIATKRGHEGEVEEWCKRMFEGLVKSVKQVEKEDLQMPNHLLGYKR 161

Query: 135  SYLKISFDTVQQLMDVKKDLLHVVERNQAKFDAAEAYESILTG---------KREQRPQD 185
             +LK+SF  V  L++V++ +L + ++N+   +A + Y  + +          +   RP +
Sbjct: 162  MFLKLSFANVGHLLEVRRSILPIAQKNKKNVNAMDTYTEMASANVGFDLFDEEVNDRPHN 221

Query: 186  -FLDC---IVDLREYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLLEKRVDLLQRAEVHV 241
             F+D    IVD+REYDVPYH+R +ID D+R G+WY V   +    L    D L+RA+  V
Sbjct: 222  AFMDAGEFIVDIREYDVPYHVRVSIDKDIRIGKWYTVQSKNGIISLSCIEDRLKRADPVV 281

Query: 242  CAFDIETTKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGY 301
             A+DIETTKLPLKFPDA  D IMMISYM+DGQGYLI NRE V EDI D EYTPKPE+EG 
Sbjct: 282  LAYDIETTKLPLKFPDAVIDQIMMISYMIDGQGYLITNREIVSEDIADFEYTPKPEYEGP 341

Query: 302  FKVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQC 361
            F + N  +E   +  +FAH++EVKP +  TYNGD+FDWPF+E RA+  G  M  E+GF+ 
Sbjct: 342  FTIFNEPDEKSTIERFFAHIKEVKPTVIATYNGDFFDWPFVEARASIQGIDMYSEIGFR- 400

Query: 362  DKNQGEC-RAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAK 420
             KN  +   + +  H+DCF+WV RDSYLPQGS+GLKAVT AKLGYDP E++PE M R+A 
Sbjct: 401  -KNSDDIYESNYCVHMDCFSWVNRDSYLPQGSRGLKAVTVAKLGYDPDELDPEVMTRYAS 459

Query: 421  EKPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQA 480
            E+PQ +A YSVSDAVATYYLYM Y+HPFIFSL TIIP++P++VLRKG+GTLCEMLLMV+A
Sbjct: 460  ERPQTLAEYSVSDAVATYYLYMKYIHPFIFSLCTIIPLNPNDVLRKGTGTLCEMLLMVEA 519

Query: 481  YKANVICPNKHQSDPEKFYRNHLLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQL 540
            Y+ N+I PNKH   PE F+  HLL+S+TY+GGHVE +E+GVFR+D+P +F ++ +A ++L
Sbjct: 520  YRGNIILPNKHTDPPESFWNGHLLDSQTYVGGHVESIEAGVFRNDIPVNFTIETTAIDEL 579

Query: 541  LNNLDRDLQYAIKVEGKMDLESVSNYDEVKNAIMEKLLRLQEEPIREECPLIYHLDVAAM 600
            L++LD  L+++I VE K  LE V+NYD++K+ I  KLL L+E P R E P IYHLDVA+M
Sbjct: 580  LSDLDSALKFSITVEEKKSLEDVTNYDKIKDQIAAKLLNLKETPNRNERPTIYHLDVASM 639

Query: 601  YPNIILTNRLQPPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYYHLKKQI 660
            YPNI+ TNRLQP S++ +  C  CDFNRPGKTC R+L W WRGE    KR +Y  +++ +
Sbjct: 640  YPNIMTTNRLQPDSMIQESDCAVCDFNRPGKTCDRRLPWSWRGEFLPAKRDEYNMIRRAV 699

Query: 661  ESE-FVDGTNGHLSKSFLDLPKMEQQSRLKDRLKKYCQKAYKRVLDKPVTELREAGICMR 719
             +E F   T     + F +L   EQ + +K RL+ Y +K Y ++ D    + REA IC R
Sbjct: 700  ANEKFPGKTPKSPMRMFDELSTTEQAAIVKKRLQDYSKKIYHKIHDSKTIQ-REAIICQR 758

Query: 720  ENSFYVDTVRSFRDRRYEYKGLNKVWKGKLSEAKASGN-SIKIQEAQDMVVLYDSLQLAH 778
            EN FYVDTVR+FRDRRY++KG  KVWKGK    KA+G  S+++ EA+ M++L+DSLQLAH
Sbjct: 759  ENPFYVDTVRNFRDRRYDFKGQQKVWKGKADALKAAGAPSVEVDEAKKMIILFDSLQLAH 818

Query: 779  KCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVL 838
            K ILNSFYGYVMRKG+RWYSMEMAGV   TGA IIQ AR L+E+IG+PLELDTDGIWC+L
Sbjct: 819  KVILNSFYGYVMRKGSRWYSMEMAGVTCLTGAHIIQMARELVERIGRPLELDTDGIWCML 878

Query: 839  PGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSI 898
            P +FPENF F  K+  KKL ISYPCVMLN  V    TN QYQTLVDP +  YETHS+ +I
Sbjct: 879  PATFPENFAFTLKN-GKKLPISYPCVMLNHLVHARFTNHQYQTLVDPKTFRYETHSDNTI 937

Query: 899  EFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAEL 958
             FEVDGPY+AMILP SKEE   +KKRYAVFN DG+LAELKGFE+KRRGELKLIK+FQ ++
Sbjct: 938  FFEVDGPYRAMILPTSKEEDKNLKKRYAVFNHDGSLAELKGFEVKRRGELKLIKIFQTQI 997

Query: 959  FDKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLADYGEQ 1018
            F  FL G+T+ E Y+AVA VANRWLD+L   G  +AD ELID I E+ +MSK+L +YG Q
Sbjct: 998  FKFFLEGTTLAETYAAVAEVANRWLDVLHLHGTTLADEELIDLICENRSMSKTLEEYGNQ 1057

Query: 1019 KSCAVTTARRLSDFLGDTMVKDKGLRCQYIVACEPQGTPVSERAVPVAIFETDAEIMKFY 1078
            KS ++TTA+RL++FLGD MVKDKGL C+YI++ +P+  P++ERA+PVAIF  +  + +F+
Sbjct: 1058 KSTSITTAKRLAEFLGDQMVKDKGLNCKYIISAKPRNFPITERAIPVAIFSAEYNVKRFF 1117

Query: 1079 LRKWCKTS-SDVGIRSIVDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLYKK 1137
            LRKW K    D+  R+++DW YY +RL S IQK+ITIPAA+QKV NPVPRV HPDWL ++
Sbjct: 1118 LRKWLKDDPGDMDPRTLIDWDYYLERLGSVIQKLITIPAALQKVRNPVPRVPHPDWLQQR 1177

Query: 1138 VREKEDKFRQRKLVDIFSSLKKDDFLNKTCNAETNLMDENVEDLEDFPKKRRNSVNGPRP 1197
            +  K+DKF+Q+KL D+F  +   D         TN+MD  +    D       SV+  + 
Sbjct: 1178 INIKDDKFKQKKLTDLFEKIPLSDL-------PTNIMDHRLPSSGDMEDMVSQSVHKQK- 1229

Query: 1198 IVRCFEVNNEQKTVKTTDQVDSLRQQLEP-SEVSDQQPSSQNAIDTENIDRIVDYKGWLE 1256
                  +N+  K+ +     D+   QL+P + +    PS              DY+ WL+
Sbjct: 1230 ------LNSVNKSSQKRKGPDNTTSQLDPFASLPATMPSMTE-----------DYEDWLK 1272

Query: 1257 LKKRKWKDNLDRR-KKQKLGSLRASHQANGVSESLGDMINHKEAQRRTGVGSYFRRQETA 1315
             +K+KWK     R +++KL   R S  +N                    +G++FR Q   
Sbjct: 1273 YQKQKWKIQKQARIRRRKLFGERTSTTSN-------------------AIGNFFRNQAEL 1313

Query: 1316 MTRCHWQIIQLVPSSQSGVFLAWVVVEGIMVRIPITVPRLFYLNSKDPIVEKFPG----- 1370
            +    WQI+QL  +   G    +V+++  +  + I VPR  ++N K    E  P      
Sbjct: 1314 IYVKTWQILQLKETDIPGEVRMFVLIDHKIHALTIKVPRQIFINLK---CEDLPDVDLAG 1370

Query: 1371 ---RRVNKTLPHGRRSFNLIEVMIDEDQFRKESKKLAALLADPEVE 1413
               ++VN +LP+G  S +L ++ + ED + KE+ K++ LL  P VE
Sbjct: 1371 CSVQKVNHSLPNGHPSVHLFKMTMPEDTYLKEADKISLLLNHPSVE 1416



 Score =  251 bits (641), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 173/636 (27%), Positives = 305/636 (47%), Gaps = 66/636 (10%)

Query: 1403 LAALLADPEVEVLGWQQNAAKIGMQRCAASSQWFNERISLARYAHI-------------- 1448
            L A  +D ++  LGWQ    K  +    A   W      LARY  +              
Sbjct: 1608 LKAEASDNDLPPLGWQSFVVKQIVMHYLALGSWLYHLGELARYGDVPICNLEKDDPKYLI 1667

Query: 1449 --------------LWISDDGVPDLGGTSEEDECFA--DEVHQPVLTYPGAYRKVSVELK 1492
                          LW S   +PD  G  E+D+      +V  P    PGAY  V +E++
Sbjct: 1668 DIAYARRLEQNNIVLWWSPSPLPDHAGY-EKDDILGPIHKVDMPSRNNPGAYSSVCIEVE 1726

Query: 1493 IHHLSVNALLKSNQVNEMEGGGLFGFDQDM-NSGPYNNELCGFDETTSSAPAFRVVKQLI 1551
            + +L++N +L S+ +NE+EG      +    +SG  +     + +T  ++    V++ L+
Sbjct: 1727 VRNLAINTILTSSLINELEGSESTLLNPVAPSSGASDGTGVLYSDTAFASAGILVLRDLV 1786

Query: 1552 QRCLTDAVTSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEFRKL 1611
            +    +A   G   AD ++QHL RW+ S  S L+D  LH  +  + +K F  L+ + R++
Sbjct: 1787 RSWWAEAC-QGKGMADIMVQHLIRWVESSDSFLYDRSLHHHVQMMSKKAFQQLMTDLRRV 1845

Query: 1612 GATIIFANFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLFMDQ 1671
            G+ IIFA+ S++++ T K ++  A AY   +LK+++ + LF +++LE   FW  L++ D+
Sbjct: 1846 GSQIIFASPSRLLLQTNKGEVGNAYAYSQYILKSIKEKPLFHFLDLEIKEFWDYLVWYDE 1905

Query: 1672 YNYGGIPARADESLDDDSQ-VDIVSSWNIAEYLPKEIQDHFVLVVSEFMYIPWKHAQKLA 1730
            +N+GG      E ++ ++Q ++ V  W ++++LP+ +Q  F+  V E  YI   H  K  
Sbjct: 1906 FNFGG--KGCHEVVEAENQELETVMHWQLSQFLPRPLQSVFLDWVVE--YIELMHGLK-- 1959

Query: 1731 ASRASLQEGSSCTP--------SITVAAAENFESHIVQYVKGEISSYFTGKLLSIVRDAI 1782
              R +++ G++ TP        SIT    E   S + +     +     G L+   RD +
Sbjct: 1960 --RPTIENGNTSTPRVTQLSFQSITDIDTEEMTSILTESFSKPLKRQIAG-LIRRQRDEL 2016

Query: 1783 HHMKKMNNDQHNS-PGVMQTAANIHKVDAPLEFIKHVCAAFALDQNVQHDVLVMRKNLLK 1841
             H +  ++    + PG        H+ +  LE +K +    +L +    +  V+R++LL 
Sbjct: 2017 LHPELASDYVFPTLPGASWRPTK-HERNPTLELVKSLMQVLSLCKTTTLETRVLRRDLLA 2075

Query: 1842 YVRVREFAPEAEFRDPCPSFILPNVICSYCNDCRDLDLCRDMALLAQD-----------W 1890
               V+EF+ E  F +P  S   P +ICS+C   RDLD+CRD  +L ++           W
Sbjct: 2076 LFEVKEFSDEGRFENPSGSLKFPLLICSHCTMARDLDICRDGDILPENDAESNNAATKPW 2135

Query: 1891 HCAMPQCGQPYDREVMENALLQIVRQRERLYHLQDLVCIRCNQVKAAHLAEQCACAGSFR 1950
             C    CG  YDR  +E  L+  V+     +  QDL C +CN ++ +   E C+C+G++ 
Sbjct: 2136 CCLF--CGTEYDRLALEEQLIGQVQGLVVEWQTQDLKCSKCNNLRVSEFMEHCSCSGNWI 2193

Query: 1951 CKEDASDFRSKMQIFLNIANRQGFQLLQECTSWILE 1986
               D      K+++F +++   G ++L   T+ +LE
Sbjct: 2194 ETVDLRAIEKKLKLFKSVSKFYGLKMLMTITNGVLE 2229


>gi|121705378|ref|XP_001270952.1| DNA polymerase epsilon, catalytic subunit A/POL2, putative
            [Aspergillus clavatus NRRL 1]
 gi|119399098|gb|EAW09526.1| DNA polymerase epsilon, catalytic subunit A/POL2, putative
            [Aspergillus clavatus NRRL 1]
          Length = 2229

 Score = 1369 bits (3544), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 712/1421 (50%), Positives = 955/1421 (67%), Gaps = 87/1421 (6%)

Query: 27   LEAKLGYDLFSEGDKRLGWLLTFASSSLEDEDTRKVYSCIDLYFVSQDGSTFKSKYKFRP 86
            ++  LG+  F  G+KR GWL+   S+S+ED +     + +D YF+   G++FK+  ++ P
Sbjct: 54   IDEALGFPRFEAGEKRAGWLINMHSTSIEDPNVPGGRAGVDYYFLEDGGTSFKATVEYDP 113

Query: 87   YFYAATKEKMEMDVEAYLRRRYESQIADIEILEKEDLDLKNHLSGLHKSYLKISFDTVQQ 146
            YF  ATK+  E +VE + RR +E  I  +  +E+EDL L NHL G  +S+L+++F  V  
Sbjct: 114  YFLIATKKGREAEVEEWCRRMFEGLIKKVTRVEREDLQLPNHLLGHRRSFLQLNFANVSH 173

Query: 147  LMDVKKDLLHVVERNQAKFDAAEAYESILTGK-----------REQRPQDFL---DCIVD 192
            L+DV+K LL + E+N+   +  + Y  I +              E R    +   D I+D
Sbjct: 174  LLDVRKTLLPLAEKNKKNVNIMDTYAEISSANAGFDLFDDELINESRSNGNMQASDFIID 233

Query: 193  LREYDVPYHIRFAIDNDVRCGQWYDVS-----ISSTGPLLEKRVDLLQRAEVHVCAFDIE 247
            +REYDVPYH+R AID D+R G+WY V      IS T   LE+R   LQRA+  + AFDIE
Sbjct: 234  IREYDVPYHVRVAIDKDIRIGKWYTVEAKHGVISLT--CLEER---LQRADPVILAFDIE 288

Query: 248  TTKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNV 307
            TTKLPLKFPD+  D IMMISYM+DGQG+LI NRE V EDI D EYTPKPE+ G F + N 
Sbjct: 289  TTKLPLKFPDSVIDQIMMISYMIDGQGFLITNREIVSEDINDFEYTPKPEYNGPFMIFNE 348

Query: 308  NNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDKNQGE 367
             NE  LL  +F H++E KP +  TYNGD+FDWPF+E RA+  G  M +E+GF+  +N  +
Sbjct: 349  PNERGLLERFFEHIKEAKPTVIATYNGDFFDWPFVEARASVLGIDMYKEIGFR--RNSED 406

Query: 368  CRAKFAC-HLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQMM 426
                  C H+DCFAWV RDSYLPQGS+GLKAVT AKLGYDP E++PE M  +A E+PQ +
Sbjct: 407  IYQSDNCVHMDCFAWVNRDSYLPQGSRGLKAVTVAKLGYDPDELDPELMTPYASERPQTL 466

Query: 427  ASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVI 486
            A YSVSDAVATYYLYM YVHPFIFSL TIIP++PD+ LRKG+GTLCEMLLMVQAY+  ++
Sbjct: 467  AEYSVSDAVATYYLYMKYVHPFIFSLCTIIPLNPDDTLRKGTGTLCEMLLMVQAYQGEIV 526

Query: 487  CPNKHQSDPEKFYRNHLLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQLLNNLDR 546
             PNKH+  PE FY  HLLESETY+GGHVE +E+GVFRSD+P +F ++ +A ++LL +LD 
Sbjct: 527  LPNKHKDPPESFYEGHLLESETYVGGHVESIEAGVFRSDIPVTFNVETAAIDELLRDLDA 586

Query: 547  DLQYAIKVEGKMDLESVSNYDEVKNAIMEKLLRLQEEPIREECPLIYHLDVAAMYPNIIL 606
             L+++I+VE K  ++ V NY+EVK  I E+L  L+E+P R+E P IYHLDVA+MYPNI++
Sbjct: 587  ALRFSIEVEEKKSMDDVVNYEEVKAQIAEQLTGLKEKPHRDEVPSIYHLDVASMYPNIMI 646

Query: 607  TNRLQPPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYYHLKKQIESEFVD 666
            TNRLQP S++ +  C ACDFNRPGKTC R+L W WRGE    KR +Y  +++ + +E   
Sbjct: 647  TNRLQPDSMIQESDCAACDFNRPGKTCDRRLPWAWRGEFLPAKRDEYNMIRQAVANERFP 706

Query: 667  GT-NGHLSKSFLDLPKMEQQSRLKDRLKKYCQKAYKRVLDKPVTELREAGICMRENSFYV 725
            G       +SF D+   +Q + +K RL++Y +K Y ++ D   T +REA IC REN FYV
Sbjct: 707  GKYKNSPMRSFGDMSTEDQAAIIKKRLQEYSKKIYHKIHDSK-TIVREAIICQRENPFYV 765

Query: 726  DTVRSFRDRRYEYKGLNKVWKGKL-SEAKASGNSIKIQEAQDMVVLYDSLQLAHKCILNS 784
            DTVRSFRDRRY++KG  KVWKGK  +   A  ++ +++EA+ M+VL+DSLQLAHK ILNS
Sbjct: 766  DTVRSFRDRRYDFKGKQKVWKGKTDALKAAGASAAEVEEAKKMIVLFDSLQLAHKVILNS 825

Query: 785  FYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLPGSFPE 844
            FYGYVMRKG+RWYSMEMAGV   TGA IIQ AR L+E+IG+PLELDTDGIWC+LPGSFPE
Sbjct: 826  FYGYVMRKGSRWYSMEMAGVTCLTGAHIIQMARELVERIGRPLELDTDGIWCMLPGSFPE 885

Query: 845  NFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEFEVDG 904
            +F+F  K+  KKL ISYPCVMLN  V    TN QYQTLVDP S  YETHS+ SI FEVDG
Sbjct: 886  DFSFTLKN-GKKLGISYPCVMLNHLVHGKYTNHQYQTLVDPKSFRYETHSDNSIFFEVDG 944

Query: 905  PYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFLH 964
            PY+AMILP SKEE   +KKRYAVFN DG+LAELKGFE+KRRGELKLIK+FQ ++F  FL 
Sbjct: 945  PYRAMILPTSKEEDKNLKKRYAVFNHDGSLAELKGFEVKRRGELKLIKIFQTQIFRFFLE 1004

Query: 965  GSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLADYGEQKSCAVT 1024
            G+T+EE Y+AVA VA+RWLD+L  QG  +AD ELI+ ISE+ +M+K+L +YG QKS ++T
Sbjct: 1005 GATLEETYAAVARVADRWLDVLYEQGATLADEELIELISENRSMTKTLEEYGNQKSTSIT 1064

Query: 1025 TARRLSDFLGDTMVKDKGLRCQYIVACEPQGTPVSERAVPVAIFETDAEIMKFYLRKWCK 1084
            TARRL++FLG+ MVKDKGL C+YI++  P+ TPV+ERA+PV IF  +  + + +LRKW K
Sbjct: 1065 TARRLAEFLGEQMVKDKGLNCKYIISARPRNTPVTERAIPVTIFSAEEPVKRHFLRKWLK 1124

Query: 1085 -TSSDVGIRSIVDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLYKKVREKED 1143
                D+  RS++DW YY +RL S +QK+ITIPAA+QKV NPVPRV HPDWL +++  K+D
Sbjct: 1125 DDPGDMDPRSVIDWDYYLERLGSVVQKLITIPAALQKVRNPVPRVAHPDWLQRRINMKDD 1184

Query: 1144 KFRQRKLVDIFSSLKKDDFLNKTCNAETNLMDENVEDLEDFPKKRRNSVN----GPRPIV 1199
            KF+Q+K+ D+F   +K    N   +  TN+MD  +++  D  +   +S       P+  +
Sbjct: 1185 KFKQKKMTDMFGKAEK----NPLADISTNIMDHRIQNNGDMEEVVASSAQKLKPSPKGKM 1240

Query: 1200 RCFEVNNEQKTVKTTDQVDSLRQQLEPSEVSDQQPSSQNAIDTENIDRIVDYKGWLELKK 1259
                 + E  T  + D   SL  ++ P  ++D                  DY G+L+ +K
Sbjct: 1241 SQKRKHPEGPTKTSLDPFASLPAKMPP--LND------------------DYVGFLKYQK 1280

Query: 1260 RKWKDNLDR--RKKQKLGSLRASHQANGVSESLGDMINHKEAQRRTGVGSYFRRQETAMT 1317
            +KWK       R++Q  G      +AN  ++SL ++               FR Q   + 
Sbjct: 1281 QKWKIQKQARVRRRQLFG-----ERANVATDSLSNL---------------FRNQAELLY 1320

Query: 1318 RCHWQIIQLVPSSQSGVFLAWVVVEGIMVRIPITVPRLFYLNSK-----DPIVEKFPGRR 1372
               WQ++QL  + + G+  A+V+++  +  + + VPR  Y+N K     D  V      +
Sbjct: 1321 INTWQVLQLCETGRPGIVRAFVLIDNKIHPLTVKVPRQLYVNLKGDSLPDVDVPDCEVEK 1380

Query: 1373 VNKTLPHGRRSFNLIEVMIDEDQFRKESKKLAALLADPEVE 1413
            VN TLP+G  S +L ++ + ED + +ES K+  LL  P +E
Sbjct: 1381 VNHTLPNGHPSVHLFKMTLSEDTYIQESDKMDILLQHPSIE 1421



 Score =  239 bits (611), Expect = 8e-60,   Method: Compositional matrix adjust.
 Identities = 171/631 (27%), Positives = 289/631 (45%), Gaps = 70/631 (11%)

Query: 1407 LADPEVEVLGWQQNAAKIGMQRCAASSQWFNERISLARYAHI------------------ 1448
            ++D ++  LGWQ   A+  +      S W      LARY  +                  
Sbjct: 1616 ISDMDLPPLGWQPFIARRLVTHYLYLSSWIQHLTLLARYGDVPLCNLENDDPRYLIDIYY 1675

Query: 1449 ----------LWISDDGVPDLGGTSEEDECFA-DEVHQPVLTYPGAYRKVSVELKIHHLS 1497
                      LW S    PD  G  ++D     ++V  P +  P AY  V +EL++ +LS
Sbjct: 1676 ARRLQQNNVVLWWSSGPRPDHAGYEKDDTVGPLEKVSMPSVNVPNAYNTVCIELEVRNLS 1735

Query: 1498 VNALLKSNQVNEMEGGGLFGFDQDMNSGPYNNELCGFDETTSSAPAFRVVKQLIQRCLTD 1557
            +N +L S+ ++EMEG        + ++      +   ++  +SA A  V++++++   T+
Sbjct: 1736 INTILTSSIISEMEGADTLLASAEPSADANGTGVLYSEKAFASAGAV-VLREMVKHWWTE 1794

Query: 1558 AVTSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEFRKLGATIIF 1617
            A   GN  AD ++QHL RW+ SP S L+D  LH  +  + +K F  L+AEFR++G+ I+F
Sbjct: 1795 AC-EGNNMADIMVQHLIRWVESPVSCLYDRSLHNYVRMLSRKSFQRLMAEFRRVGSNIVF 1853

Query: 1618 ANFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLFMDQYNYGGI 1677
            A+ +++++ T K ++  A AY   +LK+++    F +I+LE   +W  L++ D+YNYGG 
Sbjct: 1854 ASPTRLLLQTTKTEVGNAYAYSQYVLKSIRANPSFHFIDLEIKEYWDYLVWYDEYNYGGK 1913

Query: 1678 PARADESLDDDSQVDIVSSWNIAEYLPKEIQDHFVLVVSEFMYIPWKHAQKLAASRASLQ 1737
              R     +++ +++ V  W ++ +LP  +Q  F     E  YI   H  K   S     
Sbjct: 1914 GCREVTGAEEE-ELETVMYWQLSRFLPAPMQTIFHDWAVE--YIELMHGLKRPDS----- 1965

Query: 1738 EGSSCTPSITVAAAENFESHIVQYVKGEISSYFTGKLLSIVRDAIHHMKKMNNDQHNSPG 1797
             G S TP +T       E         E++S    K    ++  I  + +   D+   P 
Sbjct: 1966 -GDSSTPRLTQIPGRPEED------SDEVTSILAEKFSKPLKKQISGLIRRQRDELLHPE 2018

Query: 1798 VMQTAA-----------NIHKVDAPLEFIKHVCAAFALDQNVQHDVLVMRKNLLKYVRVR 1846
            +    A           N  K +  LE +K +    +L +    +  ++R+ LL    VR
Sbjct: 2019 LASDYAFPVLPGTLVDPNNDKRNPVLELVKLLMQVLSLSKTTTLETRLLRRELLAMFEVR 2078

Query: 1847 EFAPEAEFRDPCPSFILPNVICSYCNDCRDLDLCRDMALL-----------AQDWHCAMP 1895
            EF+ E  F +P  S  L  + C+ C   RDLDLCRD  +L            + W C  P
Sbjct: 2079 EFSKEGRFENPGASLKLSELSCNACCLIRDLDLCRDEDVLPDPGSDTSKAAPKPWRC--P 2136

Query: 1896 QCGQPYDREVMENALLQIVRQRERLYHLQDLVCIRCNQVKAAHLAEQCACAGSFRCKEDA 1955
             C   YDR   E AL+  V+     +  QDL C +C  +K +   E C+C+G +    D 
Sbjct: 2137 FCQTEYDRLAQEEALIGQVQGLIVGWQTQDLKCAKCGGLKISDFMEHCSCSGMWVETMDR 2196

Query: 1956 SDFRSKMQIFLNIANRQGFQLLQECTSWILE 1986
             +   ++++  ++A   G +LL+     +LE
Sbjct: 2197 KEVEQRLRLLESVAKFHGLKLLEGVVRGVLE 2227


>gi|195053420|ref|XP_001993624.1| GH20086 [Drosophila grimshawi]
 gi|193895494|gb|EDV94360.1| GH20086 [Drosophila grimshawi]
          Length = 2263

 Score = 1368 bits (3540), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 691/1422 (48%), Positives = 957/1422 (67%), Gaps = 55/1422 (3%)

Query: 25   EELEAKLGYDLFSEGDKRLGWLLTFASSSLEDEDTRKVYSCIDLYFVSQDGSTFKSKYKF 84
            +++++K G+D   +  +R G+L+   ++ + D+D R++ + +DL+F+  DGS FK    +
Sbjct: 40   DKIDSKYGFDRVKDSQERTGYLINMHTNEILDDD-RRLVAALDLFFIQMDGSRFKCTVAY 98

Query: 85   RPYFYAATKEKMEMDVEAYLRRRYESQIADIEILEKEDLDLKNHLSGLHKSYLKISFDTV 144
            +PY     +  M+++V  +L R+Y  Q+A +E + KEDLDL NHL+GL + YLK+SF   
Sbjct: 99   KPYLLIRPEANMQLEVARFLGRKYSGQLASLEHISKEDLDLANHLAGLQQHYLKLSFLNQ 158

Query: 145  QQLMDVKKDLLHVVERNQAKFDAAEAYESILTGKREQ-----------RPQDFLDCIVDL 193
              +  V+++L+  V RN  +  +   Y  +L     Q           R QD++DCI+D+
Sbjct: 159  TAMTKVRRELMAAVRRNTEREKSNTYYMQMLANSLAQSAGSVDDGGGKRQQDYMDCIMDI 218

Query: 194  REYDVPYHIRFAIDNDVRCGQWYDVSISSTG--PLLEKRVDLLQRAEVHVCAFDIETTKL 251
            RE+DVPYH+R +ID  + CGQWY++   S    PL+  R D+L R E  V AFDIETTKL
Sbjct: 219  REHDVPYHVRVSIDLRIFCGQWYNIRCRSGDELPLITCRPDILDRPEPVVLAFDIETTKL 278

Query: 252  PLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNVNNEI 311
            PLKFPDA  D IMMISYM+DGQGYLI NRE +  +++D EYTPKPEFEG+F + N  NE+
Sbjct: 279  PLKFPDAQTDQIMMISYMIDGQGYLITNREIISSNVDDFEYTPKPEFEGHFIIFNEENEM 338

Query: 312  ELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDKNQGECRAK 371
            +LL+ +F  + EV+P I VTYNGD+FDWPF+ETRAA +   M +E+GF   ++ G   ++
Sbjct: 339  QLLQRFFDQIMEVRPHIVVTYNGDFFDWPFVETRAAVYDLDMKQEIGFSKMRD-GVYLSR 397

Query: 372  FACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQMMASYSV 431
             A H+DC  WVKRDSYLP GSQGLKAV KAKL YDP+E++PEDM R A E+PQ++++YSV
Sbjct: 398  PAIHMDCLCWVKRDSYLPVGSQGLKAVAKAKLRYDPVELDPEDMCRMAVEQPQVLSNYSV 457

Query: 432  SDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVICPNKH 491
            SDAVATYYLYM YVHPFIF+L TIIPM PDE+LRKGSGTLCE LLMVQAY AN++ PNK 
Sbjct: 458  SDAVATYYLYMKYVHPFIFALNTIIPMEPDEILRKGSGTLCETLLMVQAYHANIVFPNKQ 517

Query: 492  QSDPEKFYR-NHLLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQLLNNLDRDLQY 550
            QS+  K     H+L+SETY+GGHVE LESGVFR+D+P  F+LDP    +L+  +D  L++
Sbjct: 518  QSELNKLSNEGHVLDSETYVGGHVEALESGVFRADIPCRFRLDPHMVSKLMEQVDAVLKH 577

Query: 551  AIKVEGKMDLESVSNYDEVKNAIMEKLLRLQEEPIREECPLIYHLDVAAMYPNIILTNRL 610
            AI+VE  + LE VSN  EVK  I++ L  L + P R E P+IYHLDV AMYPNIILTNRL
Sbjct: 578  AIEVEEGIALELVSNLAEVKQEIVQALQGLHDIPNRLEQPVIYHLDVGAMYPNIILTNRL 637

Query: 611  QPPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYYHLKKQIESE-FVDGTN 669
            QP ++V+D  C ACDFN+PG  C R ++W+WRGE+    R+++  +++Q+E+E F     
Sbjct: 638  QPSAMVSDMDCAACDFNKPGVRCKRSMDWLWRGEMLPASRNEFQRIQQQLETEKFPSLFP 697

Query: 670  GHLSKSFLDLPKMEQQSRLKDRLKKYCQKAYKRVLDKPVTELREAGICMRENSFYVDTVR 729
            G  +++F +L K +Q +  K RL  YC+KAYK+     + E R + IC +ENSFYVDTVR
Sbjct: 698  GGPTRAFHELSKEDQAAYEKKRLSDYCRKAYKKTKITKL-ETRNSTICQKENSFYVDTVR 756

Query: 730  SFRDRRYEYKGLNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHKCILNSFYGYV 789
            +FRDRRYEYKGL K  K  ++ A ASG++ +I+ A+   VLYDSLQLAHKCILNSFYGYV
Sbjct: 757  AFRDRRYEYKGLTKTAKASVNAAIASGDAAEIKAAKGREVLYDSLQLAHKCILNSFYGYV 816

Query: 790  MRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLPGSFPENFTFK 849
            MR+GARW+SM MAG+V  TG+ II  AR +IE++G+PLELDTDGIWC+LPGSFP+ FT  
Sbjct: 817  MRRGARWHSMPMAGIVCLTGSNIITKAREIIERVGRPLELDTDGIWCILPGSFPQEFTVH 876

Query: 850  TKDLKK-KLTISYPCVMLNVDVARNNTNDQYQTLVDPVSK----TYETHSECSIEFEVDG 904
            T   KK K+ ISYP  +LN  V  + TNDQY  L  P +     +Y+   E SI FEVDG
Sbjct: 877  TTHAKKQKINISYPNAVLNTMVKDHFTNDQYHELRQPGAPGQPPSYDVRDENSIFFEVDG 936

Query: 905  PYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFLH 964
            PY AM+LPA+KEEG  +KKRYAVFN DG+LAELKGFE+KRRGEL+LIK FQ+ +F+ FL 
Sbjct: 937  PYLAMVLPAAKEEGKKLKKRYAVFNFDGSLAELKGFEVKRRGELQLIKNFQSSVFESFLA 996

Query: 965  GSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLADYGEQKSCAVT 1024
            GST+EECY++VA VA+ WLD+L ++G ++ DSEL + I+E+ +MSK L +YG QKS +++
Sbjct: 997  GSTLEECYASVAKVADYWLDVLYSRGSNLPDSELFELIAENKSMSKKLEEYGAQKSTSIS 1056

Query: 1025 TARRLSDFLGDTMVKDKGLRCQYIVACEPQGTPVSERAVPVAIFETDAEIMKFYLRKWCK 1084
            TA+RL++FLG+ MVKD GL C+YI++ +P+G PV+ERAVP+AIF+++  + + +LR+W K
Sbjct: 1057 TAKRLAEFLGEQMVKDAGLACKYIISKKPEGAPVTERAVPLAIFQSEPSVRRHHLRRWLK 1116

Query: 1085 --TSSDVGIRSIVDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLYKKVREKE 1142
              T  D  IR ++DW+YY +RL   IQKIITIPAA+Q ++NPVPRV HPDWL+KK+ EK 
Sbjct: 1117 DNTMGDADIRDVLDWNYYIERLGGTIQKIITIPAALQGLANPVPRVRHPDWLHKKMLEKN 1176

Query: 1143 DKFRQRKLVDIFSSLKKDDFLNKTCNAETNLMDENVEDLEDFPKKRRN--SVNGPRPI-- 1198
            D  +QR++ ++F+S  +          E   ++  + D+ED   K+ +  S +G RP+  
Sbjct: 1177 DVLKQRRINEMFTSRPRP---KPALGTEDKQLELELGDMEDLAGKQDSEASTSG-RPMVT 1232

Query: 1199 ----VRCFEVNNEQKTVKTTDQVDSLRQQL-EPSEVSDQQPSSQNAIDTENIDRIVDYKG 1253
                V+  + +NE    +++ Q  + RQ L  P  + + + +            IV+   
Sbjct: 1233 KRKRVQLDDDDNESNAAESSPQPKTWRQALGAPPAIGETRKT------------IVE--- 1277

Query: 1254 WLELKKRKWKDNLDRRKKQKLGSLRASHQANGVSESLGDMINHKEAQRRTGVGSYFRRQE 1313
            W+  +KRKW    ++R+  +  S R     +  + +       +       +G + RR +
Sbjct: 1278 WVRFQKRKWAWQQEKRQNCRQQSKRQRGGDDSATGAASSQAATRATTATATLGGFLRRAQ 1337

Query: 1314 TAMTRCHWQIIQLVPSSQSGVFLAWVVVEGIMVRIPITVPRLFYLN--SKDPIVEKFPGR 1371
              +    WQI+QLVP +  G F  W ++   + RI +TVPR+FY+N  S  P  E    R
Sbjct: 1338 RTLLDQPWQILQLVPVNDLGQFTVWALIGEELHRIRLTVPRIFYVNQRSAAPPEEGQLWR 1397

Query: 1372 RVNKTLPHGRRSFNLIEVMIDEDQFRKESKKLAALLADPEVE 1413
            +VN+ LP  R  FNL    + E  FR     + A LA P++E
Sbjct: 1398 KVNRVLPRSRPVFNLYRYSVPEQLFRDNCLGMLADLATPDIE 1439



 Score =  167 bits (422), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 88/257 (34%), Positives = 150/257 (58%), Gaps = 11/257 (4%)

Query: 1442 LARYAHILWISDDGVPDLGGTSEEDECFADEVHQPVLTY---PGAYRKVSVELKIHHLSV 1498
            L ++  +LW S    PDLGG   +D     E  + +       G Y  V VEL +  L+V
Sbjct: 1704 LQKHNFVLWWSASTRPDLGGREADDSRLLAEFEESITVVQNRAGFYPDVCVELALDSLAV 1763

Query: 1499 NALLKSNQVNEMEGGG-LFGFD-------QDMNSGPYNNELCGFDETTSSAPAFRVVKQL 1550
            +ALL+SN++ EMEG      FD       ++M        L  +DET   + AFRV++ +
Sbjct: 1764 SALLQSNKIQEMEGASSAITFDVMPQASLEEMIGTVPAATLPSYDETALCSAAFRVMRSM 1823

Query: 1551 IQRCLTDAVTSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEFRK 1610
            +   L +   + N+F+D  + H YRW+ S ++ L+DP L R L+ +M+K+F  ++AEF++
Sbjct: 1824 VNGWLREVSINQNIFSDFQIVHFYRWVRSSNALLYDPALRRSLNNLMRKMFLRIIAEFKR 1883

Query: 1611 LGATIIFANFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLFMD 1670
            LGATI++A+F+++I+ +GK  +S A  Y D ++++L+ +E+F  I+L     W+ +L++D
Sbjct: 1884 LGATIVYADFNRIILSSGKKSVSDALGYVDYVVQSLRNKEMFHSIQLSFEQCWNFMLWLD 1943

Query: 1671 QYNYGGIPARADESLDD 1687
            Q N+ GI  R  + +D+
Sbjct: 1944 QSNFSGIRGRLPKGIDE 1960



 Score =  127 bits (320), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 64/172 (37%), Positives = 101/172 (58%), Gaps = 6/172 (3%)

Query: 1812 LEFIKHVCAAFALDQNVQHDVLVMRKNLLKYVRVREFAPEAEFRDPCPSFILPNVICSYC 1871
            LE I+ +    ++D+ +   +  +R+N+L+ V V EF+  A++ DPC + I+  VIC  C
Sbjct: 2084 LELIRTMVKVLSVDKGLAEQINELRRNMLRLVGVGEFSDLADWTDPCDTHIINEVICKAC 2143

Query: 1872 NDCRDLDLCRDMALLAQD----WHCAMPQCGQPYDREVMENALLQIVRQRERLYHLQDLV 1927
            N CRDLDLC+D     +D    W CA  QC   YD E +E  ++ +++++   Y LQDL 
Sbjct: 2144 NHCRDLDLCKDKQRALKDGIPVWLCA--QCYVAYDNEEIEMRMIDVLQRKVMSYVLQDLR 2201

Query: 1928 CIRCNQVKAAHLAEQCACAGSFRCKEDASDFRSKMQIFLNIANRQGFQLLQE 1979
            C+RCN++K  +LAE C CAG+F       +  + +  F N+A+    QLLQ+
Sbjct: 2202 CVRCNEIKRENLAEFCTCAGNFVPLISGKEIETLLNTFNNVASYHKMQLLQQ 2253


>gi|340719634|ref|XP_003398253.1| PREDICTED: LOW QUALITY PROTEIN: DNA polymerase epsilon catalytic
            subunit A-like [Bombus terrestris]
          Length = 2267

 Score = 1367 bits (3539), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 699/1420 (49%), Positives = 961/1420 (67%), Gaps = 72/1420 (5%)

Query: 27   LEAKLGYDLFSEGDKRLGWLLTFASSSLEDEDTRKVYSCIDLYFVSQDGSTFKSKYKFRP 86
            ++   G+   ++  +R+G+L+   ++ + + D R + S +D YF+ +D + FK  Y + P
Sbjct: 46   IDGLYGFHRVTDMKERIGFLINMHATEIMENDKR-LMSGVDYYFLEEDCTRFKISYPYNP 104

Query: 87   YFYAATKEKMEMDVEAYLRRRYESQIADIEILEKEDLDLKNHLSGLHKSYLKISFDTVQQ 146
            YFY   K+    +V   L ++Y + I  ++ + KEDLDL NHL GL + YLKISF     
Sbjct: 105  YFYILCKKDTYEEVSTGLNKKYNNLIHKVQTIYKEDLDLSNHLIGLKQKYLKISFINTVD 164

Query: 147  LMDVKKDLLHVVERNQAKFDAAEAYESIL---------TGKREQRPQDFLDCIVDLREYD 197
            L  V++ ++  V+ N+ +      Y ++L         TG  +++  DF+D I+D+REYD
Sbjct: 165  LNKVRRGIMKAVKLNKEREKHNTYYSNMLSDVLNTEQSTGDIKKQTIDFMDNILDIREYD 224

Query: 198  VPYHIRFAIDNDVRCGQWYDVSISSTG-PLLEKRVDLLQRAEVHVCAFDIETTKLPLKFP 256
            VP+H+R +ID  + CG WY V       P++ KR DL++  +  V A+DIETTKLPLKFP
Sbjct: 225  VPHHVRVSIDMKICCGNWYSVKTRGNDVPIITKRDDLIEPPDPIVLAYDIETTKLPLKFP 284

Query: 257  DADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNVNNEIELLRL 316
            DAD D IMMISYM+DGQGYLI NRE +  DIE+ EYTPKPEFEG+F V N  NE   ++ 
Sbjct: 285  DADTDQIMMISYMIDGQGYLITNREIIANDIENFEYTPKPEFEGFFTVFNEPNEKATIKR 344

Query: 317  WFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDKNQGECRAKFACHL 376
            +F H+ +++P I+VTYNGD+FDWPF+ETRAA H   M + +GF  +++ G   ++ A H+
Sbjct: 345  FFDHINDIRPHIFVTYNGDFFDWPFVETRAAFHNMDMKDRIGFSKNRD-GVYSSRPAMHM 403

Query: 377  DCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQMMASYSVSDAVA 436
            DC  WV+RDSYLP GSQ LKAV KAKL Y+P+E++PEDM R A E P+ +A+YSVSDAVA
Sbjct: 404  DCLCWVRRDSYLPVGSQNLKAVAKAKLRYNPVELDPEDMCRLASEDPETLANYSVSDAVA 463

Query: 437  TYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVICPNKHQSDPE 496
            TYYLY  YVHPFIF+L TIIPM PDEVLRKGSGTLCE LLMVQA++AN+I PNK + +  
Sbjct: 464  TYYLYYKYVHPFIFALCTIIPMEPDEVLRKGSGTLCESLLMVQAFQANIIFPNKQEQEFN 523

Query: 497  KFYRN-HLLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQLLNNLDRDLQYAIKVE 555
            KF ++ HLL+ ETY+GGHVE LESGVFR+D+P  FK+ PSA E+L+N ++  L++AI+ E
Sbjct: 524  KFTKDGHLLDQETYVGGHVEALESGVFRADIPCRFKIVPSAVEELINGVESALKHAIQEE 583

Query: 556  GKMDLESVSNYDEVKNAIMEKLLRLQEEPIREECPLIYHLDVAAMYPNIILTNRLQPPSI 615
             K+ +E V+N++EV   I  KL  L+ +P+R E P+IYHLDV AMYPNIILTNRLQP ++
Sbjct: 584  EKVPIEMVTNFEEVVEEITMKLKGLRNQPLRLENPVIYHLDVGAMYPNIILTNRLQPSAM 643

Query: 616  VTDEVCTACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYYHLKKQIESE-FVDGTNGHLSK 674
            V + VC AC++N+PG  C RK+EW+WRGE F    S+Y  +++Q+E+E F     G   +
Sbjct: 644  VDETVCAACNYNKPGALCQRKMEWMWRGEYFTATLSEYQRMQQQLENEKFPPQFPGGARR 703

Query: 675  SFLDLPKMEQQSRLKDRLKKYCQKAYKRVLDKPVTELREAGICMRENSFYVDTVRSFRDR 734
            ++ +L K EQ S  K RL +YC+KAYK+V    + E R   IC +ENSFYVDTVR+FRDR
Sbjct: 704  AYHELSKEEQVSYEKKRLTEYCKKAYKKVKITSMEE-RTQTICQKENSFYVDTVRAFRDR 762

Query: 735  RYEYKGLNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHKCILNSFYGYVMRKGA 794
            RYEYK L KV K +++ A A G++  I+ A++  VLYDSLQLAHKCILNSFYGYVMRKG+
Sbjct: 763  RYEYKALTKVAKQEVAVAVAKGDAADIKSAKNREVLYDSLQLAHKCILNSFYGYVMRKGS 822

Query: 795  RWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLPGSFPENFTFKTKDLK 854
            RW+SMEM G+V YTGA II  AR +IE++G+PLELDTDGIWCVLP SFP+N    T   K
Sbjct: 823  RWFSMEMGGIVCYTGAHIIMRAREIIEQVGRPLELDTDGIWCVLPASFPDNVVVYTTHPK 882

Query: 855  -KKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEFEVDGPYKAMILPA 913
             KKL +SYP  +LN  V    TND Y  LVDP + TY+  SE SI FEVDGPY AM+LPA
Sbjct: 883  XKKLVVSYPNAVLNFMVKDQFTNDVYHELVDPENLTYKIKSENSIFFEVDGPYLAMVLPA 942

Query: 914  SKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFLHGSTIEECYS 973
            +KEEG  +KKRYAVFN DG+LAELKGFE+KRRGEL+LIKVFQ  +F+ FL GST+EECY+
Sbjct: 943  AKEEGKRLKKRYAVFNFDGSLAELKGFEVKRRGELQLIKVFQTSVFESFLKGSTLEECYA 1002

Query: 974  AVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLADYGEQKSCAVTTARRLSDFL 1033
            +VA  A+ WLD+L ++  D+ DSEL + ISE+ +MS+ L +YG QKS +++TA+RL++FL
Sbjct: 1003 SVAKDADYWLDILYSKCADMPDSELFELISENKSMSRKLEEYGSQKSTSISTAKRLAEFL 1062

Query: 1034 GDTMVKDKGLRCQYIVACEPQGTPVSERAVPVAIFETDAEIMKFYLRKWCKTSS--DVGI 1091
            GD M+KD GL C+YI+A +PQG PV+ERA+P+AIF+++  I K+YLRKW K SS     I
Sbjct: 1063 GDQMIKDAGLACKYIIANKPQGAPVTERAIPLAIFQSEPAIRKYYLRKWLKDSSLQSDDI 1122

Query: 1092 RSIVDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLYKKVREKEDKFRQRKLV 1151
            R I+DWSYY +RL SAIQKIITIPAAMQ +SNPVPRV HPDWL+K+V EK    +Q+K+ 
Sbjct: 1123 RDILDWSYYIERLGSAIQKIITIPAAMQGLSNPVPRVKHPDWLHKRVMEKSATHKQKKIT 1182

Query: 1152 DIFSSLKKDDFLNKTCNAETNLMDENVE-----DLEDFPKKRRNSVNGPRPIVRCFEVNN 1206
            D+F+ + KD+        E N+ D+++E     D+ED   K       P    +   V N
Sbjct: 1183 DMFTMMPKDN--------EKNVGDQDIESSETCDIEDIAGK-------PSTSKQSLPVVN 1227

Query: 1207 EQKTVKTTDQVDSLRQQLEPSEVSDQQPS------SQNAIDTENIDRIVDYKGWLELKKR 1260
            ++K           RQ LE +E  +   S      S   + T   +R+     WLE  K+
Sbjct: 1228 KRK-----------RQFLERNEAENANRSWKEVLGSPPPMGTTREERL----KWLEFHKQ 1272

Query: 1261 KWKDNLDRRK--KQKLGSLRASHQANGVSESLGDMINHKEAQRRTGVGSYFRRQETAMTR 1318
            KW     +R   ++   S R+++  + VS  +    N       + +G +F+R +  +  
Sbjct: 1273 KWAHQAKQRAEYQKSKKSKRSNNDGDEVSWGVARDTN------TSTLGGFFKRTQRKLLM 1326

Query: 1319 CHWQIIQLVPSSQSGVFLAWVVVEGIMVRIPITVPRLFYLNSKDPIVEKFPGRRVN---- 1374
              WQIIQ+ P+++ G++  WV+V+  + ++ + +PR+FY+N++ P     PG+RV+    
Sbjct: 1327 NPWQIIQISPTNKPGLYRLWVLVDKDLHQLRLIIPRIFYVNTRKPKPNPEPGKRVSWKES 1386

Query: 1375 -KTLPHGRRSFNLIEVMIDEDQFRKESKKLAALLADPEVE 1413
             K LP  R  +NL +  + E QF+  S++L   ++ PE+E
Sbjct: 1387 KKVLPRSRPIYNLYQYTVPETQFQLYSQELLEDMSRPEIE 1426



 Score =  311 bits (796), Expect = 3e-81,   Method: Compositional matrix adjust.
 Identities = 186/578 (32%), Positives = 301/578 (52%), Gaps = 46/578 (7%)

Query: 1442 LARYAHILWISDDGVPDLGGTSEEDECFA---DEVHQPVLTYPGAYRKVSVELKIHHLSV 1498
            L +   +LW S    PDLGG+  +D       +E         G Y  V +EL+I  L+V
Sbjct: 1684 LQKNNFVLWCSPTEKPDLGGSENDDNRLLTDYEESLHSAANNAGTYSSVCIELEIESLAV 1743

Query: 1499 NALLKSNQVNEMEGGGLF-GFD-------QDMNS-GPYNNELCGFDETTSSAPAFRVVKQ 1549
            N LL+ + +++++G   F  F        QDM +     N +  +DET   +PAFR+++ 
Sbjct: 1744 NTLLQHHHIHDIDGTSNFVAFHTQQQTSVQDMATHDGMTNIIPNYDETVLCSPAFRILRN 1803

Query: 1550 LIQRCLTDAVTSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEFR 1609
            ++   L D     N+FAD  + H YRWL SP S L+DP L R LH  M+K+FA LLAEF+
Sbjct: 1804 MVNTWLLDVSVHKNIFADYQIIHFYRWLRSPSSLLYDPALKRTLHTYMKKLFAQLLAEFK 1863

Query: 1610 KLGATIIFANFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLFM 1669
             LG+ IIFANF+K+II T K  +S A  Y + +++ ++ +ELF  IE+     W  L ++
Sbjct: 1864 NLGSIIIFANFNKIIICTKKRTMSDALNYMEFVVQTIRNKELFHSIEITFEQCWEYLTWL 1923

Query: 1670 DQYNYGGIPARADESL-------------DDDSQVDIVSSWNIAEYLPKEI--QDHFVLV 1714
            D +NYGGI  +  + +             ++DS+ +IV +WN+ E LPKE   Q  F  +
Sbjct: 1924 DVHNYGGIKGKLPKDMENTTDTNNENAEDENDSEPEIVMNWNLMECLPKEAACQSSFTAI 1983

Query: 1715 VSEFMYIPWK----HAQKLAASRASL----QEGSSCTPS-ITVAAAENFESHIVQYVKGE 1765
            ++ + +  ++    H         +L    Q   +CT + + + + EN      + +KG+
Sbjct: 1984 IAGYFHAIYQFILEHELNTTVRPRNLNNLSQLSHNCTTAQLGLGSLENTAEFAKKLIKGD 2043

Query: 1766 ISSYFTGKLLSIVRDAIHHMKKMNNDQHNSPGVMQTAANIHKVDAPLEFIKHVCAAFALD 1825
            +S     KL  IV+    ++ +        P +     +  K++  LE IK VC   +LD
Sbjct: 2044 MSQ----KLFQIVQKIHKNLPEKTLTIEECPNLDLDGKDSKKINPALELIKSVCKVLSLD 2099

Query: 1826 QNVQHDVLVMRKNLLKYVRVREFAPEAEFRDPCPSFILPNVICSYCNDCRDLDLCRD--- 1882
              V+++V  +R N+LK +RV  F+   E++DPC S ++P +IC  CN  RD+DLC+D   
Sbjct: 2100 AEVENEVYYLRTNMLKLIRVGSFSDLVEWKDPCISLVVPEIICKVCNHTRDIDLCKDNFC 2159

Query: 1883 -MALLAQDWHCAMPQCGQPYDREVMENALLQIVRQRERLYHLQDLVCIRCNQVKAAHLAE 1941
             M      W C  P C   YD + +E  L+ ++  +   Y LQDL C +CN++K  ++ E
Sbjct: 2160 TMDRNRYIWKC--PLCKMDYDNDEIEFLLMDMLDHKSMAYMLQDLQCCKCNEIKRENMNE 2217

Query: 1942 QCACAGSFRCKEDASDFRSKMQIFLNIANRQGFQLLQE 1979
             C+C+G+F+     S+    M+I  ++A +   + L E
Sbjct: 2218 LCSCSGNFKTLIPKSEIEKFMKICKSVAIKSNMKTLLE 2255


>gi|343426903|emb|CBQ70431.1| probable POL2-DNA polymerase epsilon, calytic subunit A [Sporisorium
            reilianum SRZ2]
          Length = 2310

 Score = 1367 bits (3537), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 698/1433 (48%), Positives = 924/1433 (64%), Gaps = 116/1433 (8%)

Query: 25   EELEAKLGYDLFSEGDKRLGWLLTFASSSLEDEDTRKVYSCIDLYFVSQDGSTFKSKYKF 84
            +E++ +LG+    +G+ R  WL+    + L D D     S +D YF+  D S FK+   +
Sbjct: 68   DEIDDRLGFHRLEQGETRQAWLVNMHPTLLRDPDHPTGKSGVDFYFIEDDASMFKATVLY 127

Query: 85   RPYFYAATKEKMEMDVEAYLRRRYESQIADIEILEKEDLDLKNHLSGLHKSYLKISFDTV 144
            +PYF    +   E  VE +LRRR+E  I  I+   KEDL L NHL G  + YL+++F  V
Sbjct: 128  QPYFLVGCRPGTESSVEEWLRRRFEGLIQSIQRERKEDLKLPNHLLGHQRLYLRLTFLNV 187

Query: 145  QQLMDVKKDLLHVVERNQAKFDAAEAYESIL----------------------------- 175
            Q L+ V+K+LL + +  Q K  A + Y  +L                             
Sbjct: 188  QDLLSVRKELLPIAKAAQKKLSAVDTYADVLSAASAAAASASLEIEMETNGEAAGLVGDD 247

Query: 176  --TGKREQRPQDFLD---CIVDLREYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLLEKR 230
              TG R++     LD   C+VD+REYD+PY++R AID DVR G WYDVS       L   
Sbjct: 248  GWTGGRKRAAASALDPAECLVDIREYDIPYYLRVAIDQDVRVGLWYDVSFEDGIVSLRMV 307

Query: 231  VDLLQRAEVHVCAFDIETTKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDL 290
             D ++RA+  V AFDIETTK PLKFPDA+ D IMMISYM+DG GYLI NRE V EDIE+ 
Sbjct: 308  TDRVKRADPVVMAFDIETTKQPLKFPDAETDAIMMISYMIDGHGYLITNREIVSEDIENF 367

Query: 291  EYTPKPEFEGYFKVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHG 350
            +YTPK E+EG F + N  NE+ LL  +F H ++ +P +  TYNGD FD+PF++ RA  HG
Sbjct: 368  DYTPKDEYEGPFMIFNEENELALLERFFEHFRDARPTVVATYNGDSFDFPFIDARARAHG 427

Query: 351  FKMSEELGFQCDKNQGECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEV 410
              M  E+GF  D +  E +++   HLDCF WV+RDSYLPQGSQGLKAVT AKLGYDP+E+
Sbjct: 428  LNMMNEIGFAKDSDN-EYKSRATAHLDCFRWVQRDSYLPQGSQGLKAVTVAKLGYDPMEL 486

Query: 411  NPEDMVRFAKEKPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGT 470
            +PE M  +A E+PQ +A YSVSDAVATYYLY  YVHPFIFSL  IIP++PDEVLRKGSGT
Sbjct: 487  DPELMTPYAIEQPQTLAQYSVSDAVATYYLYTKYVHPFIFSLCNIIPLNPDEVLRKGSGT 546

Query: 471  LCEMLLMVQAYKANVICPNKHQSDPEKFYRNHLLESETYIGGHVECLESGVFRSDLPTSF 530
            LCE LLMVQA+K N+I PN+H+      Y+ HLLESETY+GGHVE LE+GVFRSD+ T F
Sbjct: 547  LCETLLMVQAFKGNIIMPNRHEDPVGNTYKGHLLESETYVGGHVEALEAGVFRSDIETDF 606

Query: 531  KLDPSAYEQLLNNLDRDLQYAIKVEGKMDLESVSNYDEVKNAIMEKLLRLQEEPIREECP 590
            ++DP+A +QL+++LD  LQ++I+ EGK+ L+ + NYDEVK  I   L  ++++P R++CP
Sbjct: 607  RVDPAAIQQLIDDLDAALQFSIREEGKLALDDIENYDEVKAEIRSMLEVMRDQPNRKDCP 666

Query: 591  LIYHLDVAAMYPNIILTNRLQPPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEIFMGKR 650
            LIYHLDVAAMYPNI+L+ RLQP S+V++ +C  CD+NRPG  C ++++W WRGE F  KR
Sbjct: 667  LIYHLDVAAMYPNIMLSYRLQPDSMVSEAMCATCDYNRPGMKCDKRMDWAWRGEYFPAKR 726

Query: 651  SDYYHLKKQIESEFVDGTNGHLS-KSFLDLPKMEQQSRLKDRLKKYCQKAYKRVLDKPVT 709
             +   ++  + +E       HL  +++ DL + E+ + L  RL  Y +K Y++  +   T
Sbjct: 727  DEVNMIRNALANETFPPKASHLPRRTYDDLEQNERTALLHKRLGDYSRKVYRKTHESK-T 785

Query: 710  ELREAGICMRENSFYVDTVRSFRDRRYEYKGLNKVWKGKLSEAKASGNSIKIQEAQDMVV 769
             +REA IC REN FY++TVR FRDRRYEYKGL+K WK  L +A +  ++I   EA+ M+V
Sbjct: 786  VIREAVICQRENPFYINTVRDFRDRRYEYKGLHKTWKKNLDKADSLNDTI---EAKKMIV 842

Query: 770  LYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLEL 829
            LYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAG+   TGA IIQ A+ L+E+IG+PLEL
Sbjct: 843  LYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGITCLTGASIIQMAKELVERIGRPLEL 902

Query: 830  DTDGIWCVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKT 889
            DTDGIWC+LPG FPENFTFK K   KK  ISYPC MLN  V    TN QY  LVD     
Sbjct: 903  DTDGIWCMLPGVFPENFTFKVKG-GKKFGISYPCTMLNHLVHEKFTNHQYHELVDKEKGR 961

Query: 890  YETHSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELK 949
            YE  SE SI FE+DGPYKAMILP+SKEE  L+KKRYAVFN DG+LAELKGFE+KRRGEL+
Sbjct: 962  YEVRSENSIFFELDGPYKAMILPSSKEEDKLLKKRYAVFNPDGSLAELKGFEVKRRGELQ 1021

Query: 950  LIKVFQAELFDKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMS 1009
            LIK FQ ++F+KFL G+T++ECY+AVA VAN+WLD+L ++G  + D ELID I+E+ +MS
Sbjct: 1022 LIKDFQKQIFEKFLLGTTLDECYAAVAKVANQWLDVLYSKGSTLHDEELIDLIAENKSMS 1081

Query: 1010 KSLADYGEQKSCAVTTARRLSDFLGDTMVKDKGLRCQYIVACEPQGTPVSERAVPVAIFE 1069
            K+L +YG QKS A+TTA+RL++FLG  M+KDKGL C++I++ +P G PV+ERAVPVA+F 
Sbjct: 1082 KTLQEYGSQKSTAITTAKRLAEFLGAQMIKDKGLACKFIISAKPFGAPVTERAVPVALFN 1141

Query: 1070 TDAEIMKFYLRKWCKTSS--DVGIRSIVDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPR 1127
             +  + + YL+K+ + +S  D  IR+I+DW+YY +R    IQK+ITIPAAMQKVSNPVPR
Sbjct: 1142 AEPSVKQHYLKKFLRDNSITDFDIRNILDWNYYIERFGGVIQKLITIPAAMQKVSNPVPR 1201

Query: 1128 VVHPDWLYKKVREKEDKFRQRKLVDIFSSLKKDDFLNKTCNAETNLMDENVEDLEDFPKK 1187
            V HPDWL+K+V  +EDKF+QRKL D+F                                 
Sbjct: 1202 VRHPDWLFKRVAAREDKFKQRKLTDVF--------------------------------- 1228

Query: 1188 RRNSVNGPRPIVRCFEVNNEQKTVKTTDQVDSLRQQLEPSEVSDQQPSSQNAIDTENIDR 1247
                    RP  +         +        +   ++EP EV +  P           D 
Sbjct: 1229 --------RPAAKPTSTEASTTSKPVAAVAAATITEIEP-EVEEVAP-----------DM 1268

Query: 1248 IVDYKGWLELKKRKW-KDNLDRRKKQKLGSLRASHQANGVSESLGDMINHKEAQRRTGVG 1306
             VDY GW+ + K+KW K  L R K++K    RAS      S +LG          +  VG
Sbjct: 1269 SVDYSGWVAVMKKKWRKQRLQRAKERK---ARASGGNAFGSSTLG----------KGTVG 1315

Query: 1307 SYFRRQETAMTRCHWQIIQLVPSSQSGVFLAWVVVEGIMVRIPITVPRLFYLNSKDPIVE 1366
            S F ++   M    W ++Q+ PSS+ G +  W+ ++  +  + + VPR FY+N K    E
Sbjct: 1316 SLFSKRSANMATAVWDVVQICPSSRPGEYRMWISIDQHLQSLKLRVPRQFYVNFKSQPSE 1375

Query: 1367 K--FPG----RRVNKTLPHGRRSFNLIEVMIDEDQFRKESKKLAALLADPEVE 1413
                PG     R+ KTLP      +L  + +DED ++++    + L+  P VE
Sbjct: 1376 SVFLPGVYQAERLVKTLPRDTPCRHLYRITVDEDIYQEQEAHFSNLIHHPNVE 1428



 Score =  269 bits (687), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 209/773 (27%), Positives = 339/773 (43%), Gaps = 140/773 (18%)

Query: 1332 SGVFLAWVVVEGIMVRIPITVPRLFYLNSKDPIVEKFPGRRVNKTLPHGRRSFNLIEVMI 1391
            SGVF  +     + VR+  +  R F   +KD             TL   ++   ++ +  
Sbjct: 1556 SGVF-EYADTMRVDVRVHTSASRAFKALAKDL-----------ATLKAAKQGSAMLSLCT 1603

Query: 1392 DEDQFRKESK----------KLAALLADPEVEVLGWQQNAAKIGMQRCAASSQWFNERIS 1441
             +DQ   E++          K+AA   + ++  LGWQ  +A+  +Q    +S W    I 
Sbjct: 1604 SKDQVYYETRVPSVAEFPIIKIAAAALEDDLPALGWQLYSARRMLQCYLRASAWIRGWID 1663

Query: 1442 LARYAH----------------------------ILWISDDGVPDLGGTSEEDECFA--D 1471
            LA +                              +LW S     DLGG  ++    +  D
Sbjct: 1664 LASHFDLPLGNMEKDFTLFGADIDFARRLVKQDMVLWWSPHPQLDLGGREQDIHAQSKWD 1723

Query: 1472 EVHQPVLTYPGAYRKVSVELKIHHLSVNALLKSNQVNEMEG--------GGLFGFDQDMN 1523
            E     +++ GAY  V +E+ +  L+V+++L+S  VNEMEG        G     D+   
Sbjct: 1724 EQESLEISHAGAYSTVCLEVGLVDLAVDSVLQSGTVNEMEGSTSGLAFEGASHNLDEYSR 1783

Query: 1524 SGPYNNELCGFDETTSSAPAFRVVKQLIQRCLTDAVTSGNVFADAILQHLYRWLCSPHSK 1583
                ++ + G D   +SA  F  VK +++   T    + + +A  +  + +RW  S  S 
Sbjct: 1784 GTVESSTILG-DSVLTSA-VFTAVKGMVKAWYTTKRRNRSPYAALLSDNFWRWASSDGSA 1841

Query: 1584 LHDPVLHRILHKVMQKVFAMLLAEFRKLGATIIFANFSKVIIDTGKFDLSAAKAYCDSLL 1643
            L +P L R L  +M+K    LLAEF++LGA+I++A+F+++ + T K   + A AY   LL
Sbjct: 1842 LFEPALQRFLFGLMKKTLLQLLAEFKRLGASIVYASFNRLFLLTSKPTAANAMAYSRYLL 1901

Query: 1644 KALQTRELFEWIELEPVHFWHSLLFMDQYNYGGI-------PARADESLDDDSQVDIVS- 1695
             A+ +RELF+ I+L+ +H+W  LL+MD  N+GG+        A A+E  ++ ++ D V+ 
Sbjct: 1902 SAVTSRELFKHIQLDIIHYWEYLLWMDTANFGGVIADAESLVAPAEEGAEEGARADAVAP 1961

Query: 1696 ------SWNIAEYLPKEIQDHFVLVVSEFMYIPWKHAQKLAAS--------RASLQEGSS 1741
                  +WNI  +LP  +Q+ F + V  F+Y  +++ ++ A +        RA ++  + 
Sbjct: 1962 TFNVEMNWNIQTFLPLAVQEKFSVAVGSFIYSLYEYKRRAALAGEHERTPLRAVIEPNTP 2021

Query: 1742 CTPSITVAAAENFES-------------HIVQYVKGEISSYFTGKLL------------- 1775
              P       E  +                 ++    I+   T K+L             
Sbjct: 2022 ANPVTPPGDGEQAKGDKGEQGAAASTVAPAAKFATDLINHTMTRKMLKQLAELKNAMQTL 2081

Query: 1776 ------SIVRDAIHHMKKMNNDQHNS-------PGVMQTAANIHKVDAPLEFIKHVCAAF 1822
                  ++ RD       M   +H         PG     +N       LEF+K   A  
Sbjct: 2082 SDEINAAVARDEDEEYIDMLTTEHRRVWSFPTLPGTWLALSN-----PLLEFVKTTTAVL 2136

Query: 1823 ALDQNVQHDVLVMRKNLLKYVRVREFAPEAEFRDPCPSFILPNVICSYCNDCRDLDLCRD 1882
            AL +    +V +M++NLL  + VREF+ EAEFR+PC  F LP VIC++CND R LDLCRD
Sbjct: 2137 ALAKENAVEVQIMKRNLLDMINVREFSAEAEFRNPCEPFKLPLVICTFCNDDRTLDLCRD 2196

Query: 1883 MALLAQ----------DWHCAMPQCGQPYDREVMENALLQIVRQRERLYHLQDLVCIRCN 1932
              L+ +           W CA  +C  PY    +E  L+ I       +HLQDL C +C 
Sbjct: 2197 ADLMPEAAAGGAMTTPKWKCA--KCAFPYSIAHLEMRLINIATSYLESFHLQDLRCNKCG 2254

Query: 1933 QVKAAHLAEQCACAGSFRCKEDASDFRSKMQIFLNIANRQGFQLLQECTSWIL 1985
             +K  +L   C C+GSF       +   K++    IA   G   +      IL
Sbjct: 2255 ALKQTNLQPHCECSGSFGLMVTRKETLKKLKSLQTIAQYHGLATVNAAVEGIL 2307


>gi|119492017|ref|XP_001263503.1| DNA polymerase epsilon, catalytic subunit A/POL2, putative
            [Neosartorya fischeri NRRL 181]
 gi|119411663|gb|EAW21606.1| DNA polymerase epsilon, catalytic subunit A/POL2, putative
            [Neosartorya fischeri NRRL 181]
          Length = 2230

 Score = 1367 bits (3537), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 713/1418 (50%), Positives = 953/1418 (67%), Gaps = 81/1418 (5%)

Query: 27   LEAKLGYDLFSEGDKRLGWLLTFASSSLEDEDTRKVYSCIDLYFVSQDGSTFKSKYKFRP 86
            ++  LG+  F  G+KR+GWL+   S+S+ED +     + +D YF+   G +FK+  ++ P
Sbjct: 54   IDEALGFPRFESGEKRVGWLINMHSTSIEDPNVPGGRAGVDYYFLEDGGGSFKATVEYDP 113

Query: 87   YFYAATKEKMEMDVEAYLRRRYESQIADIEILEKEDLDLKNHLSGLHKSYLKISFDTVQQ 146
            YF  A K+  E +VE + RR +E  I  I+ ++KEDL L NHL G  +++L+++F  V  
Sbjct: 114  YFLLAVKKGHEAEVEEWCRRMFEGLIKKIKRIKKEDLQLPNHLLGHRRTFLQLNFANVSH 173

Query: 147  LMDVKKDLLHVVERNQAKFDAAEAYESILTGK-----------REQRPQDFL---DCIVD 192
            L+DV+K LL + E+N+   +  + Y  I +              E RP   +   D I+D
Sbjct: 174  LLDVRKTLLPLAEKNKKNVNVMDTYAEISSANAGFDLFDDELINESRPNGNMNASDYIID 233

Query: 193  LREYDVPYHIRFAIDNDVRCGQWYDVS-----ISSTGPLLEKRVDLLQRAEVHVCAFDIE 247
            +REYDVPYH+R AID D+R G+WY V      IS T   LE+R   LQRA+  + AFDIE
Sbjct: 234  IREYDVPYHVRVAIDKDIRIGKWYTVEAKHGVISLT--CLEER---LQRADPVILAFDIE 288

Query: 248  TTKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNV 307
            TTKLPLKFPD+  D IMMISYM+DGQG+LI NRE V EDI D EYTPKPE+ G F + N 
Sbjct: 289  TTKLPLKFPDSVIDQIMMISYMIDGQGFLITNREIVSEDINDFEYTPKPEYSGPFMIFNE 348

Query: 308  NNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDKNQGE 367
             NE  ++  +F H++E KP +  TYNGD+FDWPF+E RA+  G  M +E+GF+  KN  +
Sbjct: 349  PNERSVIERFFEHIKEAKPTVIATYNGDFFDWPFVEARASVLGIDMYKEIGFR--KNSED 406

Query: 368  CRAKFAC-HLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQMM 426
                  C H+DCFAWV RDSYLPQGS+GLKAVT AKLGYDP E++PE M  +A E+PQ +
Sbjct: 407  IYQSDHCVHMDCFAWVNRDSYLPQGSRGLKAVTVAKLGYDPDELDPELMTPYASERPQTL 466

Query: 427  ASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVI 486
            A YSVSDAVATYYLYM YVHPFIFSL TIIP++PD+ LRKG+GTLCEMLLMVQAYK  ++
Sbjct: 467  AEYSVSDAVATYYLYMKYVHPFIFSLCTIIPLNPDDTLRKGTGTLCEMLLMVQAYKGEIV 526

Query: 487  CPNKHQSDPEKFYRNHLLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQLLNNLDR 546
             PNKH+  PE FY  HLLESETY+GGHVE +E+GVFRSD+P +F +D +A ++LL +LD 
Sbjct: 527  LPNKHKDPPESFYEGHLLESETYVGGHVESIEAGVFRSDIPVTFNIDTTAIDELLRDLDA 586

Query: 547  DLQYAIKVEGKMDLESVSNYDEVKNAIMEKLLRLQEEPIREECPLIYHLDVAAMYPNIIL 606
             L+++I+VE K  ++ V NY+EVK  I E+L+ L+E+P R+E P IYHLDVA+MYPNI++
Sbjct: 587  ALKFSIEVEEKKSMDDVVNYEEVKAQIAERLVNLREKPHRDEVPSIYHLDVASMYPNIMI 646

Query: 607  TNRLQPPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYYHLKKQIESEFVD 666
            TNRLQP S++ +  C ACDFNRPGKTC R+L W WRGE    KR +Y  +++ + +E   
Sbjct: 647  TNRLQPDSMIQESDCAACDFNRPGKTCDRRLPWAWRGEFLPAKRDEYNMIRQAVANERFP 706

Query: 667  G-TNGHLSKSFLDLPKMEQQSRLKDRLKKYCQKAYKRVLDKPVTELREAGICMRENSFYV 725
            G T     +SF ++   EQ + +K RL+ Y +K Y ++ D   T +REA IC REN FYV
Sbjct: 707  GRTKNSPMRSFGEMSVEEQAAIIKKRLQDYSKKIYHKIHDSK-TIVREAIICQRENPFYV 765

Query: 726  DTVRSFRDRRYEYKGLNKVWKGKLS-EAKASGNSIKIQEAQDMVVLYDSLQLAHKCILNS 784
            DTVRSFRDRRY++KG  KVWKGK      A  ++ +++EA+ M+VL+DSLQLAHK ILNS
Sbjct: 766  DTVRSFRDRRYDFKGKQKVWKGKTEALKAAGASAAEVEEAKKMIVLFDSLQLAHKVILNS 825

Query: 785  FYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLPGSFPE 844
            FYGYVMRKG+RWYSMEMAGV   TGA IIQ AR L+E+IG+PLELDTDGIWC+LPGSFPE
Sbjct: 826  FYGYVMRKGSRWYSMEMAGVTCLTGAHIIQMARELVERIGRPLELDTDGIWCMLPGSFPE 885

Query: 845  NFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEFEVDG 904
            +F+F  K+  KKL ISYPCVMLN  V    TN QYQTLVDP +  YETHS+ SI FEVDG
Sbjct: 886  DFSFTLKN-GKKLGISYPCVMLNHLVHGKYTNHQYQTLVDPKTFRYETHSDNSIFFEVDG 944

Query: 905  PYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFLH 964
            PYKAMILP SKEE   +KKRYAVFN DG+LAELKGFE+KRRGELKLIK+FQ ++F  FL 
Sbjct: 945  PYKAMILPTSKEEDKNLKKRYAVFNHDGSLAELKGFEVKRRGELKLIKIFQTQIFRFFLE 1004

Query: 965  GSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLADYGEQKSCAVT 1024
            GST+EE Y+AVA VA+RWLD+L   G  +AD ELI+ ISE+ +M+K+L +YG QKS ++T
Sbjct: 1005 GSTLEETYAAVARVADRWLDVLYEHGATLADEELIELISENRSMTKTLEEYGNQKSTSIT 1064

Query: 1025 TARRLSDFLGDTMVKDKGLRCQYIVACEPQGTPVSERAVPVAIFETDAEIMKFYLRKWCK 1084
            TARRL++FLG+ MVKDKGL C+YI++ +P+ TPV+ERA+PV IF  +  + +F+LRKW K
Sbjct: 1065 TARRLAEFLGEQMVKDKGLNCKYIISAKPRNTPVTERAIPVTIFSAEEPVKRFFLRKWLK 1124

Query: 1085 -TSSDVGIRSIVDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLYKKVREKED 1143
                D+  RS++DW YY +RL S +QK+ITIPAA+QKV NPVPRV HPDWL +++  KED
Sbjct: 1125 DDPGDMDPRSVIDWDYYLERLGSVVQKLITIPAALQKVRNPVPRVAHPDWLQRRINMKED 1184

Query: 1144 KFRQRKLVDIFSSLKKDDFLNKTCNAETNLMDENVEDLEDFPKKRRNSVNGPRPIVRCFE 1203
            KF+Q K+ D+F   +K    N   +  TN++D  V+   D  +   NS        +   
Sbjct: 1185 KFKQTKMTDMFGKTEK----NPLSDISTNILDHRVQHHGDIGEAVANSTQ------KLKS 1234

Query: 1204 VNNEQKTVKTTDQVDSLRQQLEP-SEVSDQQPSSQNAIDTENIDRIVDYKGWLELKKRKW 1262
              N + + K        +  L+P + +  + PS  +           DY  +L+ +K+KW
Sbjct: 1235 SPNGKISQKRKHPEGLTKTLLDPFASLPAKMPSLND-----------DYVEFLKYQKQKW 1283

Query: 1263 KDNLD--RRKKQKLGSLRASHQANGVSESLGDMINHKEAQRRTGVGSYFRRQETAMTRCH 1320
            K       R++Q  G      + N  ++SL ++               FR Q   +    
Sbjct: 1284 KIQKQARARRRQLFG-----ERVNVATDSLSNL---------------FRNQAELLYINT 1323

Query: 1321 WQIIQLVPSSQSGVFLAWVVVEGIMVRIPITVPRLFYLNSK-----DPIVEKFPGRRVNK 1375
            WQ++QL  + + G+  A+V+++  +  + + VPR  Y+N K     D  V      +VN 
Sbjct: 1324 WQVLQLCETGRPGIVRAFVLIDRKVHALTVKVPRQIYVNLKRDSLPDVDVPDCEVEKVNH 1383

Query: 1376 TLPHGRRSFNLIEVMIDEDQFRKESKKLAALLADPEVE 1413
            TLP+G  S +L ++ + ED + +E+ K+ ALL  P +E
Sbjct: 1384 TLPNGHPSVHLFKLTLSEDTYLRETDKIDALLQHPSIE 1421



 Score =  247 bits (630), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 178/630 (28%), Positives = 290/630 (46%), Gaps = 67/630 (10%)

Query: 1407 LADPEVEVLGWQQNAAKIGMQRCAASSQWFNERISLARYAHI------------------ 1448
            ++D ++  LGWQ   AK  +      + W      LARY  +                  
Sbjct: 1616 VSDMDLPPLGWQSFIAKRLVTHYLYLASWIQHLTMLARYGDVPLCNLENDDPRYLIDISY 1675

Query: 1449 ----------LWISDDGVPDLGGTSEEDECFADE-VHQPVLTYPGAYRKVSVELKIHHLS 1497
                      LW S+   PD  G  ++D     E V  P +  P AY  V +EL++ +LS
Sbjct: 1676 ARRLQQNNVVLWWSNGPRPDHAGYEKDDVTGPLERVSMPSVNVPSAYNTVCIELEVRNLS 1735

Query: 1498 VNALLKSNQVNEMEGGGLFGFDQDMNSGPYNNELCGFDETTSSAPAFRVVKQLIQRCLTD 1557
            +N +L S+ +NEMEG           S   N     + E   ++    V++++++   ++
Sbjct: 1736 INTILTSSIINEMEGADTL-LASSEPSADANGSGVLYSEKAFASAGAVVLREMVKHWWSE 1794

Query: 1558 AVTSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEFRKLGATIIF 1617
            A   GN  AD ++QHL RW+ SP S L+D  LH  +  + +K F  L+AEFR++G+ +IF
Sbjct: 1795 AC-EGNNMADIMVQHLIRWVESPVSCLYDRSLHNYVRMLSRKSFQRLMAEFRRVGSNVIF 1853

Query: 1618 ANFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLFMDQYNYGGI 1677
            A+ +++++ T K ++  A AY   +LK+++    F +I+LE   +W  L++ D+YNYGG 
Sbjct: 1854 ASPTRLLLQTTKTEVGNAYAYSQYVLKSIRANPSFHFIDLEIKEYWDYLVWYDEYNYGGK 1913

Query: 1678 PARADESLDDDSQVDIVSSWNIAEYLPKEIQDHFVLVVSEFMYIPWKHAQKLAASRASLQ 1737
              R + +  +D +++ V  W ++ +LP  +Q  F   V E  YI   H  K   S  S  
Sbjct: 1914 GCR-EVTGSEDQELETVMHWQLSRFLPAPMQTIFHDWVVE--YIELMHVLKRPDSDDSST 1970

Query: 1738 EGSSCTP---------SITVAAAENFESHIVQYVKGEISSYFTGKLLSIVRDAIHHMKKM 1788
               +  P          IT   AE F   + + + G         L+   RD + H +  
Sbjct: 1971 PRLTQIPIGHHNEDNDEITSILAEKFSKPLKKQISG---------LIRRQRDELLHPELA 2021

Query: 1789 NNDQHNS-PGVMQTAANIHKVDAPLEFIKHVCAAFALDQNVQHDVLVMRKNLLKYVRVRE 1847
            ++      PGV+    N  K +  LE +K +    +L +    +  ++R+ LL    VRE
Sbjct: 2022 SDYVFPVLPGVLVDPNN-DKRNPVLELVKLLMQVLSLSKTTTLETRLLRRELLAMFEVRE 2080

Query: 1848 FAPEAEFRDPCPSFILPNVICSYCNDCRDLDLCRDMALLAQ-----------DWHCAMPQ 1896
            F+ E  F +P  S  LP + C+ C   RDLDLCRD  +L +            W C  P 
Sbjct: 2081 FSKEGRFENPGASLKLPELSCNACCLIRDLDLCRDEDVLPEIGSDPNKAAPKPWRC--PF 2138

Query: 1897 CGQPYDREVMENALLQIVRQRERLYHLQDLVCIRCNQVKAAHLAEQCACAGSFRCKEDAS 1956
            C   YDR   E AL+  V+     +  QDL C +C  +K +   E C+C+G +    D  
Sbjct: 2139 CQTEYDRLAQEEALIGQVQGLIVGWQTQDLKCSKCGGLKISDFMEHCSCSGHWVETMDRK 2198

Query: 1957 DFRSKMQIFLNIANRQGFQLLQECTSWILE 1986
            +   K+ +  ++A   G +LL+     +LE
Sbjct: 2199 EVEKKLLLLNSVAKFHGLKLLESVVQGVLE 2228


>gi|226293599|gb|EEH49019.1| DNA polymerase epsilon catalytic subunit A [Paracoccidioides
            brasiliensis Pb18]
          Length = 2232

 Score = 1366 bits (3536), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 703/1427 (49%), Positives = 951/1427 (66%), Gaps = 81/1427 (5%)

Query: 15   KKQKLIRSAEEELEAKLGYDLFSEGDKRLGWLLTFASSSLEDEDTRKVYSCIDLYFVSQD 74
            +K K +R A    EA +G+  F  G  R+GWL+   S+ LED       + ++ YF+  +
Sbjct: 43   EKFKAVRLANSIDEA-MGFPRFESGKSRVGWLINMHSTILEDPKVPGGRAGVEYYFLEDN 101

Query: 75   GSTFKSKYKFRPYFYAATKEKMEMDVEAYLRRRYESQIADIEILEKEDLDLKNHLSGLHK 134
            G++FK+  ++ PYF  ATK   E +VE + +R +E  +  ++ +EKEDL + NHL G  +
Sbjct: 102  GTSFKATVEYDPYFLIATKRGHEGEVEEWCKRMFEGLVKSVKQVEKEDLQMPNHLLGYKR 161

Query: 135  SYLKISFDTVQQLMDVKKDLLHVVERNQAKFDAAEAYESILTG---------KREQRPQD 185
             +LK+SF  V  L++V++ +L + ++N+   +A + Y  + +          +   RP +
Sbjct: 162  MFLKLSFANVGHLLEVRRSILPIAQKNKKNVNAMDTYTEMASANVGFDLFDEEVNDRPHN 221

Query: 186  -FLDC---IVDLREYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLLEKRVDLLQRAEVHV 241
             F+D    IVD+REYDVPYH+R +ID D+R G+WY V   +    L    D L+RA+  V
Sbjct: 222  AFMDAGEFIVDIREYDVPYHVRVSIDKDIRIGKWYTVQSKNGIISLSCIEDRLKRADPVV 281

Query: 242  CAFDIETTKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGY 301
             A+DIETTKLPLKFPDA  D IMMISYM+DGQGYLI NRE V EDI D EYTPKPE+EG 
Sbjct: 282  LAYDIETTKLPLKFPDAVIDQIMMISYMIDGQGYLITNREIVSEDIADFEYTPKPEYEGP 341

Query: 302  FKVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQC 361
            F + N  +E   +  +FAH++EVKP +  TYNGD+FDWPF+E RA+  G  M  E+GF+ 
Sbjct: 342  FTIFNEPDEKSTIERFFAHIKEVKPTVIATYNGDFFDWPFVEARASIQGIDMYSEIGFR- 400

Query: 362  DKNQGEC-RAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAK 420
             KN  +   + +  H+DCF+WV RDSYLPQGS+GLKAVT AKLGYDP E++PE M R+A 
Sbjct: 401  -KNSDDIYESNYCVHMDCFSWVNRDSYLPQGSRGLKAVTVAKLGYDPDELDPEVMTRYAS 459

Query: 421  EKPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQA 480
            E+PQ +A YSVSDAVATYYLYM Y+HPFIFSL TIIP++P++VLRKG+GTLCEMLLMV+A
Sbjct: 460  ERPQTLAEYSVSDAVATYYLYMKYIHPFIFSLCTIIPLNPNDVLRKGTGTLCEMLLMVEA 519

Query: 481  YKANVICPNKHQSDPEKFYRNHLLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQL 540
            Y+ N+I PNKH    E F+  HLL+S+TY+GGHVE +E+GVFR+D+P +F ++ +A ++L
Sbjct: 520  YRGNIILPNKHTDPSESFWNGHLLDSQTYVGGHVESIEAGVFRNDIPVNFTIETAAIDEL 579

Query: 541  LNNLDRDLQYAIKVEGKMDLESVSNYDEVKNAIMEKLLRLQEEPIREECPLIYHLDVAAM 600
            L++LD  L+++I VE K  LE V+NYD++K  I  KLL L+E P R E P IYHLDVA+M
Sbjct: 580  LSDLDSALKFSITVEEKKSLEDVTNYDKIKAQIAAKLLNLKETPNRNERPTIYHLDVASM 639

Query: 601  YPNIILTNRLQPPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYYHLKKQI 660
            YPNI+ TNRLQP S++ +  C  CDFNRPGKTC R+L W WRGE    KR +Y  +++ +
Sbjct: 640  YPNIMTTNRLQPDSMIQESDCAVCDFNRPGKTCDRRLPWSWRGEFLPAKRDEYNMIRRAV 699

Query: 661  ESE-FVDGTNGHLSKSFLDLPKMEQQSRLKDRLKKYCQKAYKRVLDKPVTELREAGICMR 719
             +E F   T     + F +L   EQ + +K RL+ Y +K Y ++ D    + REA IC R
Sbjct: 700  ANEKFPGKTPKSPMRMFDELSTSEQAAIVKKRLQDYSKKIYHKIHDSKTIQ-REAIICQR 758

Query: 720  ENSFYVDTVRSFRDRRYEYKGLNKVWKGKLSEAKASGN-SIKIQEAQDMVVLYDSLQLAH 778
            EN FYVDTVR+FRDRRY++KG  KVWKGK    KA+G  S+++ EA+ M++L+DSLQLAH
Sbjct: 759  ENPFYVDTVRNFRDRRYDFKGQQKVWKGKADALKAAGAPSVEVDEAKKMIILFDSLQLAH 818

Query: 779  KCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVL 838
            K ILNSFYGYVMRKG+RWYSMEMAGV   TGA IIQ AR L+E+IG+PLELDTDGIWC+L
Sbjct: 819  KVILNSFYGYVMRKGSRWYSMEMAGVTCLTGAHIIQMARELVERIGRPLELDTDGIWCML 878

Query: 839  PGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSI 898
            P +FPENF F  K+  KKL ISYPCVMLN  V    TN QYQTLVDP +  YETHS+ +I
Sbjct: 879  PATFPENFAFNLKN-GKKLPISYPCVMLNHLVHARFTNHQYQTLVDPKTFRYETHSDNTI 937

Query: 899  EFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAEL 958
             FEVDGPY+AMILP SKEE   +KKRYAVFN DG+LAELKGFE+KRRGELKLIK+FQ ++
Sbjct: 938  FFEVDGPYRAMILPTSKEEDKNLKKRYAVFNHDGSLAELKGFEVKRRGELKLIKIFQTQI 997

Query: 959  FDKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLADYGEQ 1018
            F  FL G+T+ E Y+AVA VANRWLD+L   G  +AD ELID I E+ +MSK+L +YG Q
Sbjct: 998  FKFFLEGTTLAETYAAVAEVANRWLDVLHLHGTTLADEELIDLICENRSMSKTLEEYGNQ 1057

Query: 1019 KSCAVTTARRLSDFLGDTMVKDKGLRCQYIVACEPQGTPVSERAVPVAIFETDAEIMKFY 1078
            KS ++TTA+RL++FLGD MVKDKGL C+YI++ +P+  P++ERA+PVAIF  +  + +F+
Sbjct: 1058 KSTSITTAKRLAEFLGDQMVKDKGLNCKYIISAKPRNFPITERAIPVAIFSAEYNVKRFF 1117

Query: 1079 LRKWCKTS-SDVGIRSIVDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLYKK 1137
            LRKW K    D+  R+++DW YY +RL S IQK+ITIPAA+QKV NPVPRV HPDWL ++
Sbjct: 1118 LRKWLKDDPGDMDPRTLIDWDYYLERLGSVIQKLITIPAALQKVRNPVPRVPHPDWLQQR 1177

Query: 1138 VREKEDKFRQRKLVDIFSSLKKDDFLNKTCNAETNLMDENVEDLEDFPKKRRNSVNGPRP 1197
            +  K+DKF+Q+KL D+F  +   D         TN+MD  +    D       SV+  + 
Sbjct: 1178 INIKDDKFKQKKLTDLFEKIPLSDL-------PTNIMDHRLPSSGDMEDMVSQSVHKQK- 1229

Query: 1198 IVRCFEVNNEQKTVKTTDQVDSLRQQLEP--SEVSDQQPSSQNAIDTENIDRIVDYKGWL 1255
                  +N+  K+ +     D+   QL+P  S  +   P ++            DY+ WL
Sbjct: 1230 ------LNSVNKSSQKRKGPDNSTSQLDPFASLPATMPPMTE------------DYEDWL 1271

Query: 1256 ELKKRKWKDNLDRR-KKQKLGSLRASHQANGVSESLGDMINHKEAQRRTGVGSYFRRQET 1314
            + +K+KWK     R +++KL   R S  +N                    +G++FR Q  
Sbjct: 1272 KYQKQKWKIQKQARIRRRKLFGERTSTTSN-------------------AIGNFFRNQAE 1312

Query: 1315 AMTRCHWQIIQLVPSSQSGVFLAWVVVEGIMVRIPITVPRLFYLNSKDPIVEKFPG---- 1370
             +    WQI+QL  +   G    +V+++  +  + I VPR  ++N K    E  P     
Sbjct: 1313 LIYVKTWQILQLKETDIPGEVRMFVLIDHKIHALTIKVPRQIFINLK---CEDLPDVDLA 1369

Query: 1371 ----RRVNKTLPHGRRSFNLIEVMIDEDQFRKESKKLAALLADPEVE 1413
                ++VN +LP+G  S +L ++ + ED + KE+ K++ LL  P VE
Sbjct: 1370 GCSVQKVNHSLPNGHPSVHLFKMTMPEDTYLKEADKISLLLNHPSVE 1416



 Score =  253 bits (645), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 174/639 (27%), Positives = 306/639 (47%), Gaps = 71/639 (11%)

Query: 1403 LAALLADPEVEVLGWQQNAAKIGMQRCAASSQWFNERISLARYAHI-------------- 1448
            L A  +D ++  LGWQ    K  +    A   W      LARY  +              
Sbjct: 1608 LKAEASDNDLPPLGWQSFVVKQIVMHYLALGSWLYHLGELARYGDVPICNLEKDDPKYLI 1667

Query: 1449 --------------LWISDDGVPDLGGTSEEDECFA--DEVHQPVLTYPGAYRKVSVELK 1492
                          LW S   +PD  G  E+D+      +V  P    PGAY  V +E++
Sbjct: 1668 DIAYARRLEQNNIVLWWSPSPLPDHAGY-EKDDILGPIHKVDMPSRNNPGAYSSVCIEVE 1726

Query: 1493 IHHLSVNALLKSNQVNEMEGG--GLFGFDQDMNSGPYNNELCGFDETTSSAPAFRVVKQL 1550
            + +L++N +L S+ VNE+EG    L       +SG  +     + +T  ++    V++ L
Sbjct: 1727 VRNLAINTILTSSLVNELEGSESTLLNPVAPNDSGASDGTGVLYSDTAFASAGILVLRDL 1786

Query: 1551 IQRCLTDAVTSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEFRK 1610
            ++    +A   G   AD ++QHL RW+ S  S L+D  LH  +  + +K F  L+ +FR+
Sbjct: 1787 VRSWWAEAC-QGKGMADIMVQHLIRWVESSDSFLYDRSLHHHVQMMSKKAFQQLMTDFRR 1845

Query: 1611 LGATIIFANFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLFMD 1670
            +G+ IIFA+ S++++ T K ++  A AY   +LK+++ + LF +++LE   +W  L++ D
Sbjct: 1846 VGSQIIFASPSRLLLQTNKGEVGNAYAYSQYILKSIKEKPLFHFLDLEIKEYWDYLVWYD 1905

Query: 1671 QYNYGGIPARADESLDDDSQ-VDIVSSWNIAEYLPKEIQDHFVLVVSEFMYIPWKHAQKL 1729
            ++N+GG      E ++ ++Q ++ V  W ++++LP+ +Q  F+  V E  YI   H  K 
Sbjct: 1906 EFNFGG--KGCHEVVEAENQELETVMHWQLSQFLPRPLQSVFLDWVVE--YIELMHGLK- 1960

Query: 1730 AASRASLQEGSSCTPSITVAAAENFESHIVQYVKGEISSYFTGKLLSIVRDAIHHMKKMN 1789
               R +++ G++ TP +T  +   F+S I      E++S  T      ++  I  + +  
Sbjct: 1961 ---RPTVENGNTSTPRVTQLS---FQS-ITNIDNEEMTSILTESFSKPLKRQIAGLIRRQ 2013

Query: 1790 NDQHNSPG-----VMQTAANI------HKVDAPLEFIKHVCAAFALDQNVQHDVLVMRKN 1838
             D+   P      V  T          H+ +  LE +K +    +L +    +  V+R++
Sbjct: 2014 RDELLHPELASDYVFPTLPGASWRPTKHERNPTLELVKSLMQVLSLCKTTTLETRVLRRD 2073

Query: 1839 LLKYVRVREFAPEAEFRDPCPSFILPNVICSYCNDCRDLDLCRDMALLAQD--------- 1889
            LL    V+EF+ E  F +P  S   P +ICS+C   RDLD+CRD  +L ++         
Sbjct: 2074 LLALFEVKEFSDEGRFENPSGSLKFPLLICSHCTMARDLDICRDGDILPENDAESNNAAT 2133

Query: 1890 --WHCAMPQCGQPYDREVMENALLQIVRQRERLYHLQDLVCIRCNQVKAAHLAEQCACAG 1947
              W C    CG  YDR  +E  L+   +     +  QDL C +CN ++ +   E C+C+G
Sbjct: 2134 KPWCCLF--CGTEYDRLALEEQLIGQAQGLVVEWQTQDLKCSKCNNLRVSEFMEHCSCSG 2191

Query: 1948 SFRCKEDASDFRSKMQIFLNIANRQGFQLLQECTSWILE 1986
            ++    D      K+++F +++   G ++L   T+ +LE
Sbjct: 2192 NWIETVDLRAIEKKLKLFKSVSEFYGLKMLMTITNGVLE 2230


>gi|261204045|ref|XP_002629236.1| DNA polymerase epsilon catalytic subunit A [Ajellomyces dermatitidis
            SLH14081]
 gi|239587021|gb|EEQ69664.1| DNA polymerase epsilon catalytic subunit A [Ajellomyces dermatitidis
            SLH14081]
 gi|239608744|gb|EEQ85731.1| DNA polymerase epsilon catalytic subunit A [Ajellomyces dermatitidis
            ER-3]
 gi|327355470|gb|EGE84327.1| DNA polymerase [Ajellomyces dermatitidis ATCC 18188]
          Length = 2232

 Score = 1366 bits (3536), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 705/1432 (49%), Positives = 959/1432 (66%), Gaps = 91/1432 (6%)

Query: 15   KKQKLIRSAEEELEAKLGYDLFSEGDKRLGWLLTFASSSLEDEDTRKVYSCIDLYFVSQD 74
            +K + +R A   ++  +G+  F  G  R GWL+   S+ +ED       + ++ YF+  +
Sbjct: 43   EKYQAVRLANS-IDETMGFPRFESGKPRTGWLINMHSTIIEDPKVPGGRAGVEYYFLEDN 101

Query: 75   GSTFKSKYKFRPYFYAATKEKMEMDVEAYLRRRYESQIADIEILEKEDLDLKNHLSGLHK 134
            G++FK+  ++ PYF  ATK   E++VE + +R +E  +  ++++EKEDL + NHL G  +
Sbjct: 102  GTSFKATIEYDPYFLIATKRGHEIEVEEWCKRMFEGMVKSVKLVEKEDLQMPNHLLGHKR 161

Query: 135  SYLKISFDTVQQLMDVKKDLLHVVERNQAKFDAAEAYESILTG---------KREQRPQD 185
             +L++SF  V  L+ V+K +L + ++N+   ++ + Y  + +          +   +PQ+
Sbjct: 162  RFLQLSFANVGDLLGVRKSILPLAQKNKKNVNSMDTYAEMASANVGFDLFDEEVNDKPQN 221

Query: 186  -FLDC---IVDLREYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLLEKRVDLLQRAEVHV 241
             F+D    IVD+REYDVPYH+R +ID D+R G+WY V   +    L    D L RA+  V
Sbjct: 222  AFIDAGEYIVDIREYDVPYHVRVSIDKDIRIGKWYTVQSKNGVISLSCIEDRLTRADPVV 281

Query: 242  CAFDIETTKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGY 301
             A+DIETTKLPLKFPDA  D IMMISYM+D QGYLI NRE V EDI+D EYTPKPE++G 
Sbjct: 282  LAYDIETTKLPLKFPDAVIDQIMMISYMIDRQGYLITNREIVSEDIDDFEYTPKPEYDGP 341

Query: 302  FKVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQC 361
            F + N  +E  ++  +FAH++EVKP +  TYNGD+FDWPF+E RA+  G  M  E+GF+ 
Sbjct: 342  FTIFNEPDEKRVIERFFAHIKEVKPTVIATYNGDFFDWPFVEARASVQGIDMYAEIGFR- 400

Query: 362  DKNQGEC-RAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAK 420
             KN  +  ++ +  H+DCFAWV RDSYLPQGS+GLKAVT AKLGYDP E++PE M R+A 
Sbjct: 401  -KNSEDIYQSNYCVHMDCFAWVNRDSYLPQGSRGLKAVTVAKLGYDPDELDPEVMTRYAS 459

Query: 421  EKPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQA 480
            E+PQ +A YSVSDAVATYYLYM Y+HPFIFSL TIIP++PD+VLRKG+GTLCEMLLMVQA
Sbjct: 460  ERPQTLAEYSVSDAVATYYLYMKYIHPFIFSLCTIIPLNPDDVLRKGTGTLCEMLLMVQA 519

Query: 481  YKANVICPNKHQSDPEKFYRNHLLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQL 540
            Y+ N+I PNK    PE F+  HLL+S+TY+GGHVE +E+GVFRSD+P +F ++P+A E+L
Sbjct: 520  YRGNIILPNKQTEPPEAFWNGHLLDSQTYVGGHVESIEAGVFRSDIPVNFTIEPAAIEEL 579

Query: 541  LNNLDRDLQYAIKVEGKMDLESVSNYDEVKNAIMEKLLRLQEEPIREECPLIYHLDVAAM 600
            L +LD  LQ++I VE K  L+ V+NYD+VK+ I+EKLL L+E P R E P IYHLDVA+M
Sbjct: 580  LRDLDAALQFSIVVEEKKSLDDVTNYDQVKSQIIEKLLNLKETPNRNERPSIYHLDVASM 639

Query: 601  YPNIILTNRLQPPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYYHLKKQI 660
            YPNI+ TNRLQP S++ +  C ACDFNRPGKTC R++ W WRGE    KR +Y  +++ +
Sbjct: 640  YPNIMTTNRLQPDSMIQESDCAACDFNRPGKTCDRRMPWSWRGEYIPAKRDEYNMIRRAV 699

Query: 661  ESE-FVDGTNGHLSKSFLDLPKMEQQSRLKDRLKKYCQKAYKRVLDKPVTELREAGICMR 719
             +E F   T     + F +L   EQ + +K RL+ Y +K Y R+ +    + REA IC R
Sbjct: 700  TNEKFPGKTKKSPMRGFEELTTSEQAAIVKKRLQDYSKKIYHRLYESKTIQ-REAIICQR 758

Query: 720  ENSFYVDTVRSFRDRRYEYKGLNKVWKGKLSEAKASGN-SIKIQEAQDMVVLYDSLQLAH 778
            EN FYVDTVR+FRDRRY++KG  KVWKGK    KA+G  +++++EA+ M++L+DSLQLAH
Sbjct: 759  ENPFYVDTVRNFRDRRYDFKGQQKVWKGKADTLKAAGAPAVEVEEAKKMIILFDSLQLAH 818

Query: 779  KCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVL 838
            K ILNSFYGYVMRKG+RWYSMEMAGV   TGA IIQ AR LIE+IG+PLELDTDGIWC+L
Sbjct: 819  KVILNSFYGYVMRKGSRWYSMEMAGVTCLTGAHIIQMARELIERIGRPLELDTDGIWCML 878

Query: 839  PGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSI 898
            PG+FPENF F  K+  KKL ISYPCVMLN  V    TN QYQTL DP +  YETHS+ SI
Sbjct: 879  PGTFPENFAFTLKN-GKKLPISYPCVMLNHLVHGRFTNHQYQTLADPKTFRYETHSDNSI 937

Query: 899  EFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAEL 958
             FEVDGPY+AMILP SKEE   +KKRYAVFN DG+LAELKGFE+KRRGELKLIK+FQ ++
Sbjct: 938  FFEVDGPYRAMILPTSKEENKNLKKRYAVFNHDGSLAELKGFEVKRRGELKLIKIFQTQI 997

Query: 959  FDKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLADYGEQ 1018
            F  FL G+T+ E Y+AVA VANRWLD+L   G  +AD ELID I E+  MSK+L +YG Q
Sbjct: 998  FKFFLEGTTLAETYAAVAEVANRWLDVLHMHGTTLADEELIDLICENRNMSKTLEEYGNQ 1057

Query: 1019 KSCAVTTARRLSDFLGDTMVKDKGLRCQYIVACEPQGTPVSERAVPVAIFETDAEIMKFY 1078
            KS ++TTA+RL+ FLGD MVKDKGL C+YI++ +P+ +P+++RAVPVAIF  +  + +F+
Sbjct: 1058 KSTSITTAKRLAGFLGDQMVKDKGLNCKYIISAKPKNSPITDRAVPVAIFSAEYNVKRFF 1117

Query: 1079 LRKWCK-TSSDVGIRSIVDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLYKK 1137
            LRKW K    D+  R+I+DW YY +RL S IQK+ITIPAA+QKV NPVPR+ HP+WL ++
Sbjct: 1118 LRKWLKDDPGDMDPRTIIDWDYYLERLGSVIQKLITIPAALQKVRNPVPRIPHPEWLQRR 1177

Query: 1138 VREKEDKFRQRKLVDIFSSLKKDDFLNKTCNAETNLMDEN------VEDL--EDFPKKRR 1189
            +  K+DK +Q+K+ D+F      D         TN+MD        +ED+  +   K ++
Sbjct: 1178 INIKDDKLKQKKMTDLFDKTPLSDL-------PTNIMDHRLPASGYIEDIVSQSAQKHKQ 1230

Query: 1190 NSVNGPRPIVRCFEVNNEQKTV--KTTDQVDSLRQQLEPSEVSDQQPSSQNAIDTENIDR 1247
            N+VN           + +++ V   +T QVD               P++  +I TE    
Sbjct: 1231 NAVNK----------SGQKRKVPENSTSQVDPFA----------SLPTTMPSI-TE---- 1265

Query: 1248 IVDYKGWLELKKRKWKDNLDRR-KKQKLGSLRASHQANGVSESLGDMINHKEAQRRTGVG 1306
              DY+ WL+ +K+KWK     R +++KL   R S   N                    +G
Sbjct: 1266 --DYEEWLKYQKQKWKIQKQARIRRRKLFGERTSTTTN-------------------AIG 1304

Query: 1307 SYFRRQETAMTRCHWQIIQLVPSSQSGVFLAWVVVEGIMVRIPITVPRLFYLNSK----- 1361
            ++FR Q   +    WQI+QL  +   G    +V+++  +  + I VPR  ++N K     
Sbjct: 1305 NFFRNQAELVYVKTWQILQLKETDIPGEVRMFVLIDHKIHALTIKVPRHIFINLKRDDLP 1364

Query: 1362 DPIVEKFPGRRVNKTLPHGRRSFNLIEVMIDEDQFRKESKKLAALLADPEVE 1413
            D  +      +VN +LP+G  S +L ++ + ED + KE+ K++ LL  P VE
Sbjct: 1365 DVDLAGCSVEKVNHSLPNGHPSVHLFKITMPEDTYLKEADKISILLNHPSVE 1416



 Score =  238 bits (607), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 173/635 (27%), Positives = 298/635 (46%), Gaps = 73/635 (11%)

Query: 1408 ADPEVEVLGWQQNAAKIGMQRCAASSQWFNERISLARYAHI------------------- 1448
            +D ++  LGWQ   AK  +    A   W      LARY  +                   
Sbjct: 1613 SDNDLPPLGWQSFVAKQIVMHYLALDSWLFHLGELARYGDVPICNLEKDDPKYLIDIAYA 1672

Query: 1449 ---------LWISDDGVPDLGGTSEEDECFA--DEVHQPVLTYPGAYRKVSVELKIHHLS 1497
                     LW S   +PD  G  E+D+      +V  P    PGAY  V +EL+I +L+
Sbjct: 1673 RRLEQNKIVLWWSPSPLPDHAGY-EKDDILGPMQKVDMPSRNTPGAYSSVCIELEIRNLA 1731

Query: 1498 VNALLKSNQVNEMEGG--GLFGFDQDMNSGPYNNELCGFDETTSSAPAFRVVKQLIQRCL 1555
            +N +L S+ +NE+EG    L        +G  +     + +T  ++    V++ L++   
Sbjct: 1732 INTILTSSLINELEGSESTLLNPVTPNEAGASDGTGVLYSDTAFASAGILVLRDLVKSWW 1791

Query: 1556 TDAVTSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEFRKLGATI 1615
             +A   GN  AD ++QHL RW+ S  S L+D  LH  +  + +K F  L+ +FR++G+ I
Sbjct: 1792 AEAC-QGNGMADIMVQHLIRWVESSDSFLYDRSLHYHVQMMSKKAFQQLMTDFRRVGSQI 1850

Query: 1616 IFANFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLFMDQYNYG 1675
            IFA+ S++++ T K ++  A AY   +LK+++ + LF +++LE   +W  L++ D++N+G
Sbjct: 1851 IFASPSRLLLQTTKAEVGNAYAYSQYILKSIKEKPLFHFLDLEIKEYWDYLVWYDEFNFG 1910

Query: 1676 GIPARADESLDDDSQ-VDIVSSWNIAEYLPKEIQDHFVLVVSEFMYIPWKHAQKLAASRA 1734
            G      E ++ ++Q ++ V  W ++++LP  +Q  F+  V E  YI   H  K    R 
Sbjct: 1911 G--KGCQEVVEAENQELETVMHWQLSKFLPTPLQSVFLEWVVE--YIELMHGLK----RP 1962

Query: 1735 SLQEGSSCTPSITVAAAENFESHIVQYVKGEISSYFTGKLLSIVRDAIHHMKKMNNDQ-- 1792
            ++  G +  P  T      F+S I     GE++S  T      ++  I  + +   D+  
Sbjct: 1963 AIDSGGADPPRATQLP---FQS-ITDLDSGEMTSILTESFSKPLKRQIAGLIRRQRDELL 2018

Query: 1793 ----------HNSPGVMQTAANIHKVDAPLEFIKHVCAAFALDQNVQHDVLVMRKNLLKY 1842
                         PG    A    + +  LE +K +    +L +    +  ++R+ LL  
Sbjct: 2019 HPELASDYVFPTLPGASWRATKPER-NPTLELVKSLMQVLSLCKTTTLETRLLRRELLAL 2077

Query: 1843 VRVREFAPEAEFRDPCPSFILPNVICSYCNDCRDLDLCRDMALLAQD-----------WH 1891
              V+EF+    F +P  S  +P +IC++C   RDLDLCRD  +L ++           W 
Sbjct: 2078 FEVKEFSDAGRFENPSGSLKIPQLICNHCTMTRDLDLCRDGDILPENDAESISAGSKPWC 2137

Query: 1892 CAMPQCGQPYDREVMENALLQIVRQRERLYHLQDLVCIRCNQVKAAHLAEQCACAGSFRC 1951
            C    CG  YDR  +E  L+  V+     +  QDL C +C  ++ +   E C+C+GS+  
Sbjct: 2138 CL--SCGTEYDRLSLEERLIGQVQGLVVEWQTQDLKCSKCGSLRVSEFMEHCSCSGSWIA 2195

Query: 1952 KEDASDFRSKMQIFLNIANRQGFQLLQECTSWILE 1986
              D S    ++ +F ++A   G ++L   T+ +LE
Sbjct: 2196 TVDLSGIEMRLSLFKSVAEFYGLKMLTTVTNGVLE 2230


>gi|238484413|ref|XP_002373445.1| DNA polymerase epsilon, catalytic subunit A/POL2, putative
            [Aspergillus flavus NRRL3357]
 gi|317140506|ref|XP_001818230.2| DNA polymerase epsilon catalytic subunit A [Aspergillus oryzae RIB40]
 gi|220701495|gb|EED57833.1| DNA polymerase epsilon, catalytic subunit A/POL2, putative
            [Aspergillus flavus NRRL3357]
          Length = 2231

 Score = 1366 bits (3535), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 706/1424 (49%), Positives = 949/1424 (66%), Gaps = 93/1424 (6%)

Query: 27   LEAKLGYDLFSEGDKRLGWLLTFASSSLEDEDTRKVYSCIDLYFVSQDGSTFKSKYKFRP 86
            ++  LG+  F  G+KR+GWL    S+S+ED +     + +D YF+  +G +FK+  ++ P
Sbjct: 54   IDESLGFPRFESGEKRVGWLTNMHSTSVEDPNIPGGRAGVDYYFLEDNGGSFKATVEYDP 113

Query: 87   YFYAATKEKMEMDVEAYLRRRYESQIADIEILEKEDLDLKNHLSGLHKSYLKISFDTVQQ 146
            YF  A K+  E +VE + RR +E  I  +  +EKEDL L NHL G  +++L++ F  V  
Sbjct: 114  YFLIAVKKGHEAEVEEWCRRMFEGLIKKVTRVEKEDLKLPNHLLGHRRTFLQMYFANVSH 173

Query: 147  LMDVKKDLLHVVERNQAKFDAAEAY--------------ESILTGKREQRPQDFLDCIVD 192
            L++V++ LL + E+N+   +  + Y              + I+   R     +  D I+D
Sbjct: 174  LLEVRRTLLPLAEKNKKNVNVMDTYVEISSANAGFDLFDDEIINESRSNGTMEASDFIID 233

Query: 193  LREYDVPYHIRFAIDNDVRCGQWYDVS-----ISSTGPLLEKRVDLLQRAEVHVCAFDIE 247
            +REYDVPYH+R AID D+R G+WY V      IS T   +E+RV   QR +  V AFDIE
Sbjct: 234  IREYDVPYHVRVAIDKDIRIGKWYTVEAKHGVISLT--CIEERV---QRPDPVVLAFDIE 288

Query: 248  TTKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNV 307
            TTKLPLKFPD+  D IMMISYM+DGQG+LI NRE V EDI D EYTPKPE+ G F + N 
Sbjct: 289  TTKLPLKFPDSVIDQIMMISYMIDGQGFLITNREIVSEDINDFEYTPKPEYYGPFMIFNE 348

Query: 308  NNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDKNQGE 367
             +E  +L  +F H++E KP +  TYNGD+FDWPF+E RA+  G  M  E+GF+  KN  +
Sbjct: 349  PDERSVLERFFGHIKEAKPTVIATYNGDFFDWPFVEARASVLGIDMYTEIGFR--KNSED 406

Query: 368  CRAKFAC-HLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQMM 426
                  C H+DCFAWV RDSYLPQGS+GLKAVT AKLGYDP E++PE M  +A E+PQ +
Sbjct: 407  IYQSDHCVHMDCFAWVNRDSYLPQGSRGLKAVTVAKLGYDPDELDPELMTPYASERPQTL 466

Query: 427  ASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVI 486
            A YSVSDAVATYYLYM YVHPFIFSL TI+P++PD+ LRKG+GTLCEMLLMVQAY+  ++
Sbjct: 467  AEYSVSDAVATYYLYMKYVHPFIFSLCTIVPLNPDDTLRKGTGTLCEMLLMVQAYQGEIV 526

Query: 487  CPNKHQSDPEKFYRNHLLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQLLNNLDR 546
             PNKH+  PE FY  HLLESETY+GGHVE +E+GVFRSD+P +FK+DP+A ++LL +LD 
Sbjct: 527  LPNKHKEPPEAFYEGHLLESETYVGGHVESIEAGVFRSDIPVTFKIDPTAIDELLRDLDA 586

Query: 547  DLQYAIKVEGKMDLESVSNYDEVKNAIMEKLLRLQEEPIREECPLIYHLDVAAMYPNIIL 606
             L+++I+VE K  L+ V NY+EVK  I + L+ L+E P R+E P IYHLDVA+MYPNII 
Sbjct: 587  ALKFSIEVEEKKSLDDVVNYEEVKGQISKLLIALKENPNRDENPFIYHLDVASMYPNIIT 646

Query: 607  TNRLQPPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYYHLKKQIESE-FV 665
            TNRLQP +++ +  C ACDFNRPGKTC R++ W WRGE    KR +Y  +++ + +E F 
Sbjct: 647  TNRLQPDAMIQESNCAACDFNRPGKTCDRRMPWAWRGEFLPAKRDEYNMVRQAVANERFP 706

Query: 666  DGTNGHLSKSFLDLPKMEQQSRLKDRLKKYCQKAYKRVLDKPVTELREAGICMRENSFYV 725
              T     + F D+   EQ + +K RL+ Y +K Y ++ D   T +REA IC REN FYV
Sbjct: 707  GKTKNSPMRLFSDMSAEEQSAIVKKRLQDYSKKIYHKIHDSK-TIVREAIICQRENPFYV 765

Query: 726  DTVRSFRDRRYEYKGLNKVWKGKLSEAKASGNSIK-IQEAQDMVVLYDSLQLAHKCILNS 784
            +TVR+FRDRRY++KG  KVWK K    K+SG S   I+EA+ M++L+DSLQLAHK ILNS
Sbjct: 766  NTVRNFRDRRYDFKGKQKVWKNKTDSLKSSGASAADIEEAKKMIILFDSLQLAHKVILNS 825

Query: 785  FYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLPGSFPE 844
            FYGYVMRKG+RWYS+EMAGV   TGA+IIQ AR L+E+IG+PLELDTDGIWC+LPGSFPE
Sbjct: 826  FYGYVMRKGSRWYSLEMAGVTCLTGARIIQMARELVERIGRPLELDTDGIWCMLPGSFPE 885

Query: 845  NFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEFEVDG 904
            NF+F  K+  KKL ISYPCVMLN  V  + TN QYQTLVDP +  YETHS+ SI FEVDG
Sbjct: 886  NFSFTLKN-GKKLGISYPCVMLNHLVHGSYTNHQYQTLVDPKTFRYETHSDNSIFFEVDG 944

Query: 905  PYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFLH 964
            PYKAMILP SKEE   +KKRYAVFN DG+LAELKGFE+KRRGELKLIK+FQ ++F  FL 
Sbjct: 945  PYKAMILPTSKEEDKNLKKRYAVFNHDGSLAELKGFEVKRRGELKLIKIFQTQIFKFFLE 1004

Query: 965  GSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLADYGEQKSCAVT 1024
            G+++EE Y+AVA VA+RWLD+L   G  +AD ELI+ ISE+ +M+K+L +YG QKS ++T
Sbjct: 1005 GTSLEETYAAVARVADRWLDVLYEHGATLADEELIELISENRSMTKTLEEYGSQKSTSIT 1064

Query: 1025 TARRLSDFLGDTMVKDKGLRCQYIVACEPQGTPVSERAVPVAIFETDAEIMKFYLRKWCK 1084
            TARRL++FLG+ MVKDKGL C+YI++  P+ TPV+ERA+PVAIF  +  + +F+LRKW K
Sbjct: 1065 TARRLAEFLGEQMVKDKGLNCKYIISARPRNTPVTERAIPVAIFSAEENVKRFFLRKWLK 1124

Query: 1085 -TSSDVGIRSIVDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLYKKVREKED 1143
                D   R+++DW YY +RL S +QK+ITIPAA+QKV NPVPRV HPDWL +++  K+D
Sbjct: 1125 DDPGDCDPRTVIDWDYYLERLGSVVQKLITIPAALQKVRNPVPRVAHPDWLQRRINVKDD 1184

Query: 1144 KFRQRKLVDIFSSLKKDDFLNKTCNAETNLMDENVEDLEDF-------PKKRRNSVNGPR 1196
            KF+Q K+ D+F+  +K    N   +  TN++D  V+   D         +K ++S N   
Sbjct: 1185 KFKQIKMTDVFAKSEK----NPLTDISTNILDHRVQHAGDIGEVIASSTEKLKSSPNSKT 1240

Query: 1197 PIVRCFEVNNEQKTVKTTDQVDSLRQQLEPSEVSDQQPSSQNAIDTENIDRIVDYKGWLE 1256
               R      E  T  + D   SL  ++ P  ++D                  DY G+L+
Sbjct: 1241 SQKRKLP---EGPTKTSLDPFASLPSRMPP--MAD------------------DYVGFLK 1277

Query: 1257 LKKRKWKDNLDR--RKKQKLGSLRASHQANGVSESLGDMINHKEAQRRTGVGSYFRRQET 1314
             +K+KWK       R++Q  G      + N  ++SL  +               FR Q  
Sbjct: 1278 YQKQKWKIQKQARIRRRQLFG-----ERTNIANDSLSHL---------------FRNQAE 1317

Query: 1315 AMTRCHWQIIQLVPSSQSGVFLAWVVVEGIMVRIPITVPRLFYLNSK-----DPIVEKFP 1369
             +    WQ++QL  +++ G+  A+V+++  +  + + VPR  Y+N K     D  V    
Sbjct: 1318 LLYISTWQVLQLSETTRPGIVRAFVLIDKKIHTLTVKVPRQMYINLKRESLPDVDVPDCE 1377

Query: 1370 GRRVNKTLPHGRRSFNLIEVMIDEDQFRKESKKLAALLADPEVE 1413
              +VN TLP+G  S +L ++ + E+ + +E+ K+  LL  P +E
Sbjct: 1378 VEKVNHTLPNGHPSVHLFKLTLSEETYLREADKMDTLLQHPSIE 1421



 Score =  248 bits (634), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 172/629 (27%), Positives = 299/629 (47%), Gaps = 64/629 (10%)

Query: 1407 LADPEVEVLGWQQNAAKIGMQRCAASSQWFNERISLARYAHI------------------ 1448
            ++D ++  LGWQ   A+  +      S W      LARY  +                  
Sbjct: 1616 VSDMDLPPLGWQAFIARRLVTHYLYLSAWIQHLTMLARYGDVPLCNLESDDPRYLIDISY 1675

Query: 1449 ----------LWISDDGVPDLGGTSEEDECFA-DEVHQPVLTYPGAYRKVSVELKIHHLS 1497
                      LW S    PD  G  ++D     ++V  P +  P AY  V +EL++ +L+
Sbjct: 1676 ARRLQQNNVVLWWSSGPRPDHAGYEKDDITGPLEKVSMPSVNVPSAYTTVCIELEVRNLA 1735

Query: 1498 VNALLKSNQVNEMEGGGLFGFDQDMNSGPYNNELCGFDETTSSAPAFRVVKQLIQRCLTD 1557
            +N +L S+ +NEMEG        + ++    + +   ++  +SA A  V++++++   T+
Sbjct: 1736 INTILTSSIINEMEGADTLLASSEPSADSNGSGVLYSEKAFASAGAI-VLREMVKHWWTE 1794

Query: 1558 AVTSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEFRKLGATIIF 1617
            A   GN  AD ++QHL RW+ SP S L+D  LH  +  + +K F  L+AEFR++G+ IIF
Sbjct: 1795 AC-EGNNMADIMVQHLIRWVESPVSCLYDRSLHNYVRMLSRKSFQRLMAEFRRVGSNIIF 1853

Query: 1618 ANFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLFMDQYNYGGI 1677
            A+ +++++ T K ++  A AY   +LK+++    F +I+LE   +W  L++ D+YNYGG 
Sbjct: 1854 ASSTRLLLQTTKAEVGNAYAYSQYVLKSIRANPSFHFIDLEIKEYWDYLIWYDEYNYGGK 1913

Query: 1678 PARADESLDDDSQVDIVSSWNIAEYLPKEIQDHFVLVVSEFMYI--PWKHAQKLAASRAS 1735
              R +    D+ +++ V  W ++ +LP  +Q  F   V E++ +    KH +   +S   
Sbjct: 1914 GCR-EVVGSDEQELETVMHWQLSRFLPGPMQTIFHDWVVEYIDLMHGVKHPESADSSTPR 1972

Query: 1736 LQEGSSCTPS------ITVAAAENFESHIVQYVKGEISSYFTGKLLSIVRDAIHHMKKMN 1789
            + +     P+      ++   AE F   + + + G         L+   R+ + H +  +
Sbjct: 1973 MTQIPIGRPTDEDDDEVSAVLAEKFSKPLKKQISG---------LIRRQREEMLHPELAS 2023

Query: 1790 NDQHNS-PGVMQTAANIHKVDAPLEFIKHVCAAFALDQNVQHDVLVMRKNLLKYVRVREF 1848
            +      PGV+ +  N  K +  LE +K +    +L +    +  ++R+ LL    VREF
Sbjct: 2024 DYLFPVLPGVL-SDPNEEKRNPVLELVKMLMQVLSLSKTTSLENRLLRRELLAMFEVREF 2082

Query: 1849 APEAEFRDPCPSFILPNVICSYCNDCRDLDLCRDMALL-----------AQDWHCAMPQC 1897
            + E  F +P  S  LP + CS C   RDLDLCRD  +L            + W C  P C
Sbjct: 2083 SKEGRFENPAASLKLPELTCSACCLIRDLDLCRDEDVLPDPGSDPSKAVTKPWRC--PFC 2140

Query: 1898 GQPYDREVMENALLQIVRQRERLYHLQDLVCIRCNQVKAAHLAEQCACAGSFRCKEDASD 1957
               YDR   E  L+  V      +  QDL C +C  +K +   E C+C+G +    D ++
Sbjct: 2141 QTEYDRLAQEEILIGQVHGLIVGWQTQDLKCSKCGGLKVSEFMEHCSCSGKWVETMDRAE 2200

Query: 1958 FRSKMQIFLNIANRQGFQLLQECTSWILE 1986
               K+++  ++A   G +LL+     +LE
Sbjct: 2201 AEKKLRVLNSVAKFHGLKLLENVVEGVLE 2229


>gi|242786100|ref|XP_002480736.1| DNA polymerase epsilon, catalytic subunit A/POL2, putative
            [Talaromyces stipitatus ATCC 10500]
 gi|218720883|gb|EED20302.1| DNA polymerase epsilon, catalytic subunit A/POL2, putative
            [Talaromyces stipitatus ATCC 10500]
          Length = 2222

 Score = 1365 bits (3532), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 704/1413 (49%), Positives = 934/1413 (66%), Gaps = 77/1413 (5%)

Query: 27   LEAKLGYDLFSEGDKRLGWLLTFASSSLEDEDTRKVYSCIDLYFVSQDGSTFKSKYKFRP 86
            ++  +G+  F  G+KR GWL+   S+S+ED +     + +D YF+  DG++FK+  ++ P
Sbjct: 55   IDETMGFSRFEAGEKRAGWLINMHSTSVEDPNIPGGRAGVDFYFLEDDGNSFKATVEYDP 114

Query: 87   YFYAATKEKMEMDVEAYLRRRYESQIADIEILEKEDLDLKNHLSGLHKSYLKISFDTVQQ 146
            YF  A K   E +VE + RR  E  I D+  + +EDL + NHL G  +++L++SF  V  
Sbjct: 115  YFLIAVKGGREQEVEEWCRRILEGIIKDVRRVVREDLQMPNHLLGNRRTFLRLSFVNVSN 174

Query: 147  LMDVKKDLLHVVERNQAKFDAAEAYESILTGKR----------EQRPQDFL---DCIVDL 193
            L++ +K L+ + E+N+    A + Y  +               E RP   L   D I+D+
Sbjct: 175  LLEARKLLMPIAEKNKKNVTAMDTYAEMARTSAGFDLFDDELDESRPNAALNASDFIIDI 234

Query: 194  REYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLLEKRVDLLQRAEVHVCAFDIETTKLPL 253
            REYDVPYH+R +ID D+R G+WY+V        L    + LQRA+  V AFDIETTKLPL
Sbjct: 235  REYDVPYHVRVSIDKDIRIGKWYNVEAKHGVTKLTCIEERLQRADPVVLAFDIETTKLPL 294

Query: 254  KFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNVNNEIEL 313
            KFPDA  D IMMISYM+DG G+LI NRE V EDI D EYTPKPE+ G F + N  +E  +
Sbjct: 295  KFPDAVIDQIMMISYMIDGNGFLITNREIVSEDINDFEYTPKPEYNGPFVIFNEPDERHV 354

Query: 314  LRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDKNQGECRAKFA 373
            L  +F+H++E KP +  TYNGD+FDWPF+E RA+  G  M  E+GF+  KN  +      
Sbjct: 355  LERFFSHIKEAKPTVIATYNGDFFDWPFVEARASVLGIDMYAEIGFK--KNSEDIYQSDH 412

Query: 374  C-HLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQMMASYSVS 432
            C H+DCFAWV RDSYLPQGS+GLKAVT AKLGYDP E++PE M R+A+E+PQ +A YSVS
Sbjct: 413  CAHMDCFAWVNRDSYLPQGSRGLKAVTVAKLGYDPDELDPELMTRYARERPQTLAEYSVS 472

Query: 433  DAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVICPNKHQ 492
            DAVATYYLYM Y+HPFIFSL TIIP++PD+VLRKG+GTLCEMLLMVQAYK  +I PNKH+
Sbjct: 473  DAVATYYLYMKYIHPFIFSLCTIIPLNPDDVLRKGTGTLCEMLLMVQAYKGEIILPNKHK 532

Query: 493  SDPEKFYRNHLLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQLLNNLDRDLQYAI 552
              PE FY  HLL+SETY+GGHVE +E+GVFRSD+P +F +DP A ++LL +LD  L+++I
Sbjct: 533  DPPESFYEGHLLDSETYVGGHVESIEAGVFRSDIPVNFVVDPKAIDELLRDLDAALKFSI 592

Query: 553  KVEGKMDLESVSNYDEVKNAIMEKLLRLQEEPIREECPLIYHLDVAAMYPNIILTNRLQP 612
             VE K  LE V+NY+EVK  I E+L  L+  P R E PLIYHLDVA+MYPNI+ TNRLQP
Sbjct: 593  VVEEKKSLEDVTNYEEVKAQITEQLESLKTTPNRSERPLIYHLDVASMYPNIMTTNRLQP 652

Query: 613  PSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYYHLKKQIESE-FVDGTNGH 671
             S+  +  C ACDFNRPGKTC R+L W WRGE    KR +Y  +++ +E+E F   T   
Sbjct: 653  DSMKQESDCAACDFNRPGKTCDRRLPWAWRGEFLPAKRDEYNMIRRAVENERFPGKTKNA 712

Query: 672  LSKSFLDLPKMEQQSRLKDRLKKYCQKAYKRVLDKPVTELREAGICMRENSFYVDTVRSF 731
              + F D+   EQ + +K RL++Y +K Y ++ D    E REA IC REN FYV+TVR F
Sbjct: 713  PMRYFRDMQTEEQAAIIKKRLQEYSKKIYHKIHDSKTIE-REAIICQRENPFYVNTVRDF 771

Query: 732  RDRRYEYKGLNKVWKGKLSEAKASGNS-IKIQEAQDMVVLYDSLQLAHKCILNSFYGYVM 790
            RDRRY++KG  KVWKGK    KA+G S  +I EA+ M+VL+DSLQLAHK ILNSFYGYVM
Sbjct: 772  RDRRYDFKGKQKVWKGKTESLKAAGASNAEIDEAKKMIVLFDSLQLAHKVILNSFYGYVM 831

Query: 791  RKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLPGSFPENFTFKT 850
            RKG+RWYSMEMAGV   TGA+IIQ AR L+E+IG+PLELDTDGIWC+LP +FPENF F  
Sbjct: 832  RKGSRWYSMEMAGVTCLTGARIIQMARELVERIGRPLELDTDGIWCMLPATFPENFAFTL 891

Query: 851  KDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEFEVDGPYKAMI 910
            K+  KK+ +SYPCVMLN  V    TN QYQTLVDP +  YET S+ SI FEVDGPYKAMI
Sbjct: 892  KN-GKKMALSYPCVMLNHLVHGRFTNHQYQTLVDPKTFKYETTSDNSIFFEVDGPYKAMI 950

Query: 911  LPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFLHGSTIEE 970
            LPASKEE   +KKRYAVFNDDG+LAELKGFE+KRRGELKLIK+FQ ++F  FL G  + E
Sbjct: 951  LPASKEEDKNLKKRYAVFNDDGSLAELKGFEVKRRGELKLIKIFQTQIFKFFLDGKDLAE 1010

Query: 971  CYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLADYGEQKSCAVTTARRLS 1030
             Y +VA VANRWLD+L   G  +AD ELID I E+ +MSK++ +YG QKS ++TTA+RL+
Sbjct: 1011 TYQSVARVANRWLDVLYEHGATLADEELIDLICENRSMSKTVEEYGTQKSTSITTAKRLA 1070

Query: 1031 DFLGDTMVKDKGLRCQYIVACEPQGTPVSERAVPVAIFETDAEIMKFYLRKWCKTS-SDV 1089
            +FLG+ M+KD+GL C+YI++ +P+  PV+ERA+PV IF  +  + +F+LRKW K   SD+
Sbjct: 1071 EFLGEQMIKDRGLNCRYIISSKPRNAPVTERAIPVTIFSAEENVKRFFLRKWLKDDPSDM 1130

Query: 1090 GIRSIVDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLYKKVREKEDKFRQRK 1149
              RSI+DW YY +RL S IQK+ITIPAA+QK+ NPVPRV HPDWL +++  ++DKF+Q+K
Sbjct: 1131 DPRSIIDWDYYLERLGSVIQKLITIPAALQKLGNPVPRVQHPDWLQRRINTRDDKFKQKK 1190

Query: 1150 LVDIFSSLKKDDFLNKTCNAETNLMDENV---EDLEDFPKKRRNSVNGPRPIVRCFEVNN 1206
            + D+F         N       N++D  V    D+ED                    +  
Sbjct: 1191 MTDMFEK-------NPLSEKSANILDHRVPHNADIED------------------ISIQM 1225

Query: 1207 EQKTVKTTDQVDSLRQQLEPSEVSDQQPSSQNAIDTENIDRIVDYKGWLELKKRKWKDNL 1266
            ++K V  + ++   R+  E    +   P +       +I    DY+G+++ +K+KWK   
Sbjct: 1226 DKKKVSPSSKMVQKRKLPEGPSTTSLDPYASLPAVMPSITE--DYEGFIKYQKQKWKIQK 1283

Query: 1267 DRRKKQKLGSLRASHQANGVSESLGDMINHKEAQRRTGVGSYFRRQETAMTRCHWQIIQL 1326
              R +++        Q  G      D ++H           YFR Q   +    W ++QL
Sbjct: 1284 QARIRRR--------QLFGEKSKASDSLSH-----------YFRNQAQMLFINTWTVLQL 1324

Query: 1327 VPSSQSGVFLAWVVVEGIMVRIPITVPRLFYLNSKD---PIVEKFPG---RRVNKTLPHG 1380
              +   G   A+V+++  +  + + VPR  ++N KD   P VE  P     +VN TLP+G
Sbjct: 1325 KETDVPGEVRAFVLIDRKVHALTVKVPRQLFINFKDDSLPEVE-LPSCEVEKVNNTLPNG 1383

Query: 1381 RRSFNLIEVMIDEDQFRKESKKLAALLADPEVE 1413
              S +L ++ + ED +  ES+K+A LL  P VE
Sbjct: 1384 HPSVHLFKLTLPEDVYLAESEKMAVLLNHPSVE 1416



 Score =  243 bits (619), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 172/637 (27%), Positives = 300/637 (47%), Gaps = 75/637 (11%)

Query: 1403 LAALLADPEVEVLGWQQNAAKIGMQRCAASSQWFNERISLARYAHI-------------- 1448
            + A ++D ++  LGWQ   AK  +        W      LARY  +              
Sbjct: 1606 VKAEVSDTDMPPLGWQSFIAKRLLTHYLYLGSWIQHLKMLARYGDVPVCNLESDDPRYLI 1665

Query: 1449 --------------LWISDDGVPDLGGTSEEDECFA-DEVHQPVLTYPGAYRKVSVELKI 1493
                          LW S    PD  G  ++D   + D V  P +  PG Y  VS+EL++
Sbjct: 1666 DVSYARRLEKSNVVLWWSSGPRPDHAGYEKDDVLGSLDTVDMPSINVPGTYTTVSIELEV 1725

Query: 1494 HHLSVNALLKSNQVNEMEGGGLFGFDQDMNSGPYNNELCGFDETTSSAPAFRVVKQLIQR 1553
             +L++N +L S+ +N++EG      D  + S   + +   + E   ++    V+++++++
Sbjct: 1726 RNLAINTILTSSIINDLEGS-----DTLLASTKESADGVLYSEKAFASAGVFVLREMVKQ 1780

Query: 1554 CLTDAVTSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEFRKLGA 1613
              ++A T G   AD ++QHL RW+ SP S L+D  LH  +  + +K F  L+ +FR++G+
Sbjct: 1781 WWSEACT-GKTMADIMVQHLVRWVESPSSCLYDRSLHYYVRMMSRKSFQQLMGDFRRVGS 1839

Query: 1614 TIIFANFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLFMDQYN 1673
             +IFA+ +++++ T K ++  A AY   +LK+++   +F +I+LE   +W  L++ D++N
Sbjct: 1840 NVIFASPTRLLLQTTKQEVGTAYAYSQYILKSIRANPVFHFIDLELKEYWDFLVWYDEFN 1899

Query: 1674 YGGIPARADESLDDDS-QVDIVSSWNIAEYLPKEIQDHFVLVVSEFMYIPWKHAQKLAAS 1732
            YGG      E ++ +S Q++ V  W +  +LP  +Q  F   V E  YI   H  K    
Sbjct: 1900 YGG--KGCQEVVEAESQQLNTVMHWQMNRFLPVPMQQVFNDWVIE--YIDLMHGLK---- 1951

Query: 1733 RASLQEGSSCTPSITVAAAENFESHIVQYVKGEISSYFTGKLLSIVRDAIHHMKKMNNDQ 1792
            R + +  +S TP +T          + +    E++++ T K    ++  I  + +   D+
Sbjct: 1952 RGNEESENSSTPRLT-----QIPKSLTETTDDEVTNFLTDKFSKPLKKQIVGLIRRQRDE 2006

Query: 1793 --HNS----------PGVMQTAANIHKVDAPLEFIKHVCAAFALDQNVQHDVLVMRKNLL 1840
              H            PG +    N    +A LE +K +    +L +    +  ++R+ LL
Sbjct: 2007 LLHPELASDYVFPILPGAL-VDPNTENRNAVLELVKALMQVLSLSKTTTLETRLLRRELL 2065

Query: 1841 KYVRVREFAPEAEFRDPCPSFILPNVICSYCNDCRDLDLCRDMALL-----------AQD 1889
                VREF+ E  F +P  S  LP + CS C   RDLDLCRD  +L            + 
Sbjct: 2066 ALFEVREFSKEGRFENPSASLKLPELTCSACCLIRDLDLCRDEDILPDLGSDGKKTAPKA 2125

Query: 1890 WHCAMPQCGQPYDREVMENALLQIVRQRERLYHLQDLVCIRCNQVKAAHLAEQCACAGSF 1949
            W C  P C   YDR   E  L+  V      +  QDL C +CN +K     E C+C+G +
Sbjct: 2126 WRC--PFCQTEYDRLAQEERLVGEVHGMIVSWQAQDLKCSKCNSLKVNAFMEHCSCSGKW 2183

Query: 1950 RCKEDASDFRSKMQIFLNIANRQGFQLLQECTSWILE 1986
                D ++ + K+++ L++A     +LL+  +  +L+
Sbjct: 2184 TTTLDRNEIQKKLRVMLSVAKFHDLKLLEGVSEEVLQ 2220


>gi|407923538|gb|EKG16608.1| hypothetical protein MPH_06189 [Macrophomina phaseolina MS6]
          Length = 2250

 Score = 1364 bits (3530), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 711/1443 (49%), Positives = 942/1443 (65%), Gaps = 88/1443 (6%)

Query: 9    QDGRRTKKQKLIRSAE-----EELEAK---------LGYDLFSEGDKRLGWLLTFASSSL 54
            ++G +T     +RS+E     E+LEA           G+  +  G K+ GWL    S+++
Sbjct: 24   RNGPKTVDASTLRSSEATSQNEKLEATRLANSIDETFGFVRYESGKKKAGWLFNMHSTTI 83

Query: 55   EDEDTRKVYSCIDLYFVSQDGST-FKSKYKFRPYFYAATKEKMEMDVEAYLRRRYESQIA 113
            EDE+     + +D YF+  +G   FK+   + PYF  A K   E DVE + +R +E  + 
Sbjct: 84   EDENHPGGRAGVDFYFIGDNGEDYFKATVGYDPYFLVAIKRGKEADVEEWCKRAFEGLVK 143

Query: 114  DIEILEKEDLDLKNHLSGLHKSYLKISFDTVQQLMDVKKDLLHVVERNQAKFDAAEAYES 173
            +I  +EKEDL + NHL G  +++LK++F  V  L+ V+K LL + E N+ K +A + Y  
Sbjct: 144  NISKIEKEDLSMPNHLLGYRRTFLKLTFVNVPDLLAVRKVLLPIAEVNKKKMNAMDTYAE 203

Query: 174  ILTGKR-----------EQRPQDFL---DCIVDLREYDVPYHIRFAIDNDVRCGQWYDVS 219
            + +              E+RP  F+   D IVD+REYDVPYH+R AID D+R G+WY V 
Sbjct: 204  VASANAGFDIFDDDQDYEKRPNGFVEASDYIVDIREYDVPYHVRVAIDLDIRIGKWYWVE 263

Query: 220  ISSTGPLLEKRVDLLQRAEVHVCAFDIETTKLPLKFPDADYDIIMMISYMLDGQGYLIIN 279
                   L    D L RA+  V A+DIET+K PLKFPD+  D IMMISYM+DGQG+LI N
Sbjct: 264  AKHGITTLTCIEDRLTRADPVVMAYDIETSKAPLKFPDSSIDQIMMISYMIDGQGFLITN 323

Query: 280  RECVGEDIEDLEYTPKPEFEGYFKVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDW 339
            RE V EDI D EYTPKPE+EG F + N  +E  +L  +F H++  +P + VTYNGD+FDW
Sbjct: 324  REIVSEDIADFEYTPKPEYEGPFMIFNEPDEKAVLERFFEHIKIARPTVMVTYNGDFFDW 383

Query: 340  PFLETRAAHHGFKMSEELGFQCDKNQGEC-RAKFACHLDCFAWVKRDSYLPQGSQGLKAV 398
            PF+E RA+  G  M +E+GF+  KN  +  ++   CHLD FAWV RDSYLPQGS+GLKAV
Sbjct: 384  PFVEARASILGIDMYQEIGFR--KNSEDIYQSDHCCHLDAFAWVNRDSYLPQGSRGLKAV 441

Query: 399  TKAKLGYDPLEVNPEDMVRFAKEKPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPM 458
            T AKLGYDP E++PE M  +A EKPQ++A YSVSDAVATYYLYM YVHPFIFSL TIIP+
Sbjct: 442  TVAKLGYDPDELDPELMTPYASEKPQILAEYSVSDAVATYYLYMKYVHPFIFSLCTIIPL 501

Query: 459  SPDEVLRKGSGTLCEMLLMVQAYKANVICPNKHQSDPEKFYRNHLLESETYIGGHVECLE 518
             PD+VLRKG+GTLCEMLLMVQAY+  ++ PNKH +  E F+  HLLESETY+GGHVE +E
Sbjct: 502  GPDDVLRKGTGTLCEMLLMVQAYQKEIVLPNKHHAPREAFWDGHLLESETYVGGHVESIE 561

Query: 519  SGVFRSDLPTSFKLDPSAYEQLLNNLDRDLQYAIKVEGKMDLESVSNYDEVKNAIMEKLL 578
            +GVFRSD+P +F LD +A++QL++ LD  L+++I VE K  ++ + NYDEVK  I EKL 
Sbjct: 562  AGVFRSDIPVNFALDSAAFQQLIDELDAALKFSITVEEKKSMDDIVNYDEVKEQIAEKLR 621

Query: 579  RLQEEPIREECPLIYHLDVAAMYPNIILTNRLQPPSIVTDEVCTACDFNRPGKTCLRKLE 638
             L++ P R E P IYHLDVA+MYPNI+ TNRLQP S+VT+  C ACDFNRPGKTC R+L 
Sbjct: 622  NLRDTPNRNEKPSIYHLDVASMYPNIMTTNRLQPDSMVTEADCAACDFNRPGKTCDRRLP 681

Query: 639  WVWRGEIFMGKRSDYYHLKKQIESEFVDGTNGHLSKSFLDLPKMEQQSRLKDRLKKYCQK 698
            W WRGE    KR +Y  ++  +E+E   G     ++SF +L   EQ + +K RL+ Y +K
Sbjct: 682  WAWRGEYLPAKRDEYNMIRNSLENEKFPGKRPGTTRSFQELSLDEQAAMVKKRLQDYSKK 741

Query: 699  AYKRVLDKPVTELREAGICMRENSFYVDTVRSFRDRRYEYKGLNKVWKGKLSEAKASGNS 758
             Y ++ +   T  RE+ IC REN FYVDTV +FRDRRY++KG  KVWKGK    KASG S
Sbjct: 742  IYHKIHES-TTLQRESIICQRENPFYVDTVSTFRDRRYDFKGKQKVWKGKTEALKASGAS 800

Query: 759  -IKIQEAQDMVVLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNAR 817
              ++ EA+ M+VL+DSLQLAHK ILNSFYGYVMRKG+RWYS+EMAG+  +TGA IIQ A 
Sbjct: 801  AAEVDEAKKMIVLFDSLQLAHKVILNSFYGYVMRKGSRWYSLEMAGITCFTGASIIQMAC 860

Query: 818  LLIEKIGKPLELDTDGIWCVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTND 877
             L+E+IG+PLELDTDGIWC+LP +FPENF+FKTK+  KK+ ISYPCVMLN  V    TN 
Sbjct: 861  QLVERIGRPLELDTDGIWCILPATFPENFSFKTKN-GKKVAISYPCVMLNHRVHDKFTNH 919

Query: 878  QYQTLVDPVSKTYETHSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAEL 937
            QYQ L DP +  YET S+ SI FEVDGPYKAMILP SKEE   +KKRYAVFN DG+LAEL
Sbjct: 920  QYQDLKDPETFRYETRSDNSIFFEVDGPYKAMILPTSKEEDKNLKKRYAVFNHDGSLAEL 979

Query: 938  KGFEIKRRGELKLIKVFQAELFDKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSE 997
            KGFE+KRRGELKLIK+FQ ++F  FL GST++E Y+AVA VAN+WLD+L +QG  +AD E
Sbjct: 980  KGFEVKRRGELKLIKIFQTQIFKFFLEGSTLQETYAAVAKVANQWLDVLYSQGTTLADEE 1039

Query: 998  LIDYISESSTMSKSLADYGEQKSCAVTTARRLSDFLGDTMVKDKGLRCQYIVACEPQGTP 1057
            LID I E+ +M+K++ +YG  K+ A+TTARRL++FLG+ M+KDKGL C+YI++ +P+  P
Sbjct: 1040 LIDLICENKSMTKTVEEYGGAKTTAITTARRLAEFLGEQMIKDKGLNCKYIISSQPKHAP 1099

Query: 1058 VSERAVPVAIFETDAEIMKFYLRKWCKT-SSDVGIRSIVDWSYYKQRLSSAIQKIITIPA 1116
            V+ERA+PVAIF  +  + K++LRKW K+   D   R+I DWSYY +RL S IQK+ITIPA
Sbjct: 1100 VTERAIPVAIFSAEESVKKYFLRKWLKSDPGDCDPRTITDWSYYLERLGSVIQKLITIPA 1159

Query: 1117 AMQKVSNPVPRVVHPDWLYKKVREKEDKFRQRKLVDIFSSLKKDDFLNKTCNAETNLMDE 1176
            A+QKV NPVPRV HPDWL +++R K+D F+Q+K+ D+F      D        + N++ +
Sbjct: 1160 ALQKVRNPVPRVAHPDWLERRIRIKDDVFKQKKMTDMFGKKALTDI-------DANVVAK 1212

Query: 1177 NVEDLEDFPKKRRNSVNGPRPIVRCFEVNNEQKTVKTTDQVDSLRQQLEPSEVSDQQPSS 1236
             + DLEDF   +   ++ PR           + TV    Q     +   P++     PS 
Sbjct: 1213 KMADLEDFGGSQ---LDKPR-----------KGTVTKMVQKRKAPEPAAPTDPYASLPSK 1258

Query: 1237 QNAIDTENIDRIVDYKGWLELKKRKWKDNLDRRKKQKLGSLRASHQANGVSESLGDMINH 1296
              +I TE      DY+GWL+ +K                  +              +   
Sbjct: 1259 MPSI-TE------DYQGWLKYQK------------------QKWKIQKQQRIRRRQLFGE 1293

Query: 1297 KEAQRRTGVGSYFRRQETAMTRCHWQIIQLVPSSQSGVFLAWVVVEGIMVRIPITVPRLF 1356
            K      G+G++FR Q   +    WQ++QL      G   A+++++  +  I I VPR  
Sbjct: 1294 KRTDASDGLGTFFRNQAELVYMNKWQLLQLRQGDLPGEVKAYILIDKKIYVIKIVVPRQV 1353

Query: 1357 YLN--SKDPIVEKFPG----RRVNKTLPHGRRSFNLIEVMIDEDQFRKESKKLAALLADP 1410
            YLN  S D      PG    + VN TLP+G  S +L ++ + E+ +  ESK L  L   P
Sbjct: 1354 YLNLRSDDLPNVSIPGCSVEKVVNHTLPNGHPSVHLFKLTLPEETYVNESKNLTLLFNHP 1413

Query: 1411 EVE 1413
             VE
Sbjct: 1414 SVE 1416



 Score =  207 bits (527), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 155/648 (23%), Positives = 299/648 (46%), Gaps = 70/648 (10%)

Query: 1403 LAALLADPEVEVLGWQQNAAKIGMQRCAASSQWFNERISLARYAHI-------------- 1448
            L A  +D ++  LGWQ   A+  +        W    ++LARY  I              
Sbjct: 1607 LQADESDKQLPPLGWQNFVARRLIDHYLDLGTWVAHLVNLARYGDIPLCNLERDDPRFLI 1666

Query: 1449 --------------LWISDDGVPDLGGTSEEDECFADE-VHQPVLTYPGAYRKVSVELKI 1493
                          LW S+   PD  G  ++D     E V  P +  PG Y  V ++L+I
Sbjct: 1667 DIAYARRLQKDKVVLWWSEGPKPDHAGYEKDDVLGQLETVEMPSINNPGTYSSVCIDLEI 1726

Query: 1494 HHLSVNALLKSNQVNEMEGGGLFGFD--QDMNSGPYNNELCGFDETTSSAPAFRVVKQLI 1551
             +L+++ +L S+ +NE EG     F+        P +     + +   ++    V+++++
Sbjct: 1727 KNLAISTVLSSSIINEAEGSDSVSFNPAAPTEEQPSDGSNVIYSDNAFASAGILVLREMV 1786

Query: 1552 QRCLTDAVTSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEFRKL 1611
            +   ++A   G+  AD ++QHL RW+  P S L+D  LH  +  + +K    L+++FR++
Sbjct: 1787 KAWWSEA-EKGSDMADVMVQHLVRWVECPGSFLYDRALHYYVQIMSKKALQQLMSDFRRV 1845

Query: 1612 GATIIFANFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLFMDQ 1671
            G+ ++FA+ +++++ T K ++  A AY   +LK ++ + +F+ ++L+   +W  L + D+
Sbjct: 1846 GSHVVFASANRLLLQTTKAEVGNAYAYSQYILKTVRAKPIFQSLDLQIKEYWDYLAWYDE 1905

Query: 1672 YNYGGIPARADESLDDDSQ-VDIVSSWNIAEYLPKEIQDHF---VLVVSEFMYIPWKHAQ 1727
            +NYGG   R  E ++ ++Q +D +  W+ A +LP  +Q  F   V+   E M+   +  Q
Sbjct: 1906 FNYGGKGCR--EVVEAENQTLDTIMCWHFATFLPPALQPVFNDWVVEFIELMHTRKRPQQ 1963

Query: 1728 KLAASRASLQEGSSCTPSITVAAAENFESHIVQYVKGEISSYFTGKLLSIVRDAIHHMKK 1787
            + ++S  + Q     TP  T     +            ++  FT  L    ++    +++
Sbjct: 1964 RPSSSGGNGQMQVESTPRQTQLPFRSLTQDPSDGPTTVLAKTFTKTL---TKEIAALLRR 2020

Query: 1788 MNNDQHNS--------PGVMQTAANIHK--VDAPLEFIKHVCAAFALDQNVQHDVLVMRK 1837
             + +Q ++        P +     +I     +  L+ +K +    +LD+++  +  ++RK
Sbjct: 2021 QHQEQLHAELAPDWLFPSLPGANPDIAAGLTNPTLQLVKCLTQVLSLDKSINLEARLLRK 2080

Query: 1838 NLLKYVRVREFAPEAEFRDPCPSFILPNVICSYCNDCRDLDLCRDMALLAQ--------- 1888
             LL+   VREF+ EA F +P  S  +  ++C  C   RD+DLCRD  ++A          
Sbjct: 2081 ELLRLFDVREFSTEAAFANPAASLWVRGLVCDDCTAVRDVDLCRDGEIIASMSRPSANME 2140

Query: 1889 --------DWHCAMPQCGQPYDREVMENALLQIVRQRERLYHLQDLVCIRCN--QVKAAH 1938
                      + + P C  P+D   +E  L   V+     +  QD+ C +C   Q + + 
Sbjct: 2141 DGGAAPKGTLNLSCPSCHAPHDLARLETRLAADVQALALKWVGQDVKCGKCGRLQSETSC 2200

Query: 1939 LAEQCACAGSFRCKEDASDFRSKMQIFLNIANRQGFQLLQECTSWILE 1986
              E CAC+G +       D   K++++  +A   GF +L+ C + ++E
Sbjct: 2201 FMEHCACSGQWMPSLKREDLVRKLKVYEQVAKWFGFGVLESCVNEVVE 2248


>gi|24649301|ref|NP_524462.2| DNA polymerase epsilon [Drosophila melanogaster]
 gi|23172053|gb|AAF56126.3| DNA polymerase epsilon [Drosophila melanogaster]
          Length = 2236

 Score = 1363 bits (3528), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 698/1414 (49%), Positives = 951/1414 (67%), Gaps = 58/1414 (4%)

Query: 25   EELEAKLGYDLFSEGDKRLGWLLTFASSSLEDEDTRKVYSCIDLYFVSQDGSTFKSKYKF 84
            +++++K G+D   +  +R G+L+   S+ + DED R++ + +DL+F+  DGS FK    +
Sbjct: 40   DKIDSKYGFDRVKDSQERTGYLINMHSNEVLDED-RRLIAALDLFFIQMDGSRFKCTVAY 98

Query: 85   RPYFYAATKEKMEMDVEAYLRRRYESQIADIEILEKEDLDLKNHLSGLHKSYLKISFDTV 144
            +PY     ++ M ++V  +L R+Y  QI+ +E + KEDLDL NHLSGL + Y+K+SF   
Sbjct: 99   QPYLLIRPEDNMHLEVARFLGRKYSGQISGLEHITKEDLDLPNHLSGLQQQYIKLSFLNQ 158

Query: 145  QQLMDVKKDLLHVVERNQAKFDAAEAYESILTGKREQ------------RPQDFLDCIVD 192
              +  V+++L+  V+RNQ +  +   Y  +L     Q            R QD++DCIVD
Sbjct: 159  TAMTKVRRELMSAVKRNQERQKSNTYYMQMLATSLAQSSAGSEDATLGKRQQDYMDCIVD 218

Query: 193  LREYDVPYHIRFAIDNDVRCGQWYDVSISSTG--PLLEKRVDLLQRAEVHVCAFDIETTK 250
            +RE+DVPYH+R +ID  + CGQWY++   S    P +  R D+L R E  V AFDIETTK
Sbjct: 219  IREHDVPYHVRVSIDLRIFCGQWYNIRCRSGVELPTITCRPDILDRPEPVVLAFDIETTK 278

Query: 251  LPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNVNNE 310
            LPLKFPDA  D +MMISYM+DGQGYLI NRE +  +++D EYTPKPEFEG F V N  NE
Sbjct: 279  LPLKFPDAQTDQVMMISYMIDGQGYLITNREIISSNVDDFEYTPKPEFEGNFIVFNEENE 338

Query: 311  IELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDKNQGECRA 370
            ++LL+ +F H+ EV+P I VTYNGD+FDWPF+ETRAA +   M +E+GF   ++ G   +
Sbjct: 339  MQLLQRFFDHIMEVRPHIIVTYNGDFFDWPFVETRAAVYDLDMKQEIGFSKLRD-GNYLS 397

Query: 371  KFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQMMASYS 430
            + A H+DC  WVKRDSYLP GSQGLKAV KAKL YDP+E++PEDM R A E+PQ++A+YS
Sbjct: 398  RPAIHMDCLCWVKRDSYLPVGSQGLKAVAKAKLRYDPVELDPEDMCRMAVEQPQVLANYS 457

Query: 431  VSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVICPNK 490
            VSDAVATYYLYM YVHPFIF+L TIIPM PDE+LRKGSGTLCE LLMV+AY A ++ PNK
Sbjct: 458  VSDAVATYYLYMKYVHPFIFALNTIIPMEPDEILRKGSGTLCETLLMVEAYHAQIVYPNK 517

Query: 491  HQSDPEKFY-RNHLLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQLLNNLDRDLQ 549
            HQS+  K     H+L+SETY+GGHVE LESGVFR+D+P  F+LDP+  +QL   +D  L+
Sbjct: 518  HQSELNKLSNEGHVLDSETYVGGHVEALESGVFRADIPCRFRLDPAMVKQLQEQVDAVLR 577

Query: 550  YAIKVEGKMDLESVSNYDEVKNAIMEKLLRLQEEPIREECPLIYHLDVAAMYPNIILTNR 609
            +AI+VE  + LE V N DEV+  I++ L  L + P R E P+IYHLDV AMYPNIILTNR
Sbjct: 578  HAIEVEEGIPLEKVLNLDEVRQEIVQGLQGLHDIPNRLEQPVIYHLDVGAMYPNIILTNR 637

Query: 610  LQPPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYYHLKKQIESE-FVDGT 668
            LQP ++V+D  C ACDFN+PG  C R ++W+WRGE+    R+++  +++Q+E+E F    
Sbjct: 638  LQPSAMVSDLDCAACDFNKPGVRCKRSMDWLWRGEMLPASRNEFQRIQQQLETEKFPPLF 697

Query: 669  NGHLSKSFLDLPKMEQQSRLKDRLKKYCQKAYKRV-LDKPVTELREAGICMRENSFYVDT 727
             G   ++F +L K +Q +  K RL  YC+KAYK+  L K   E R + IC +ENSFYVDT
Sbjct: 698  PGGPQRAFHELSKEDQAAYEKKRLTDYCRKAYKKTKLTK--LETRTSTICQKENSFYVDT 755

Query: 728  VRSFRDRRYEYKGLNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHKCILNSFYG 787
            VR+FRDRRYEYKGL KV K  ++ A ASG++ +I+ A+   VLYDSLQLAHKCILNSFYG
Sbjct: 756  VRAFRDRRYEYKGLTKVAKASVNAAVASGDAAEIKAAKGREVLYDSLQLAHKCILNSFYG 815

Query: 788  YVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLPGSFPENFT 847
            YVMR+GARW+SM MAG+V  TG+ II  AR +IE++G+PLELDTDGIWC+LPGSFP+ FT
Sbjct: 816  YVMRRGARWHSMPMAGIVCLTGSNIITKAREIIERVGRPLELDTDGIWCILPGSFPQEFT 875

Query: 848  FKTK-DLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKT---YETHSECSIEFEVD 903
              T  + KKK+ ISYP  +LN  V  + TNDQY  L          Y+   E SI FEVD
Sbjct: 876  IHTSHEKKKKINISYPNAVLNTMVKDHFTNDQYHELRKDKENNLPKYDIRDENSIFFEVD 935

Query: 904  GPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFL 963
            GPY AM+LPA+KEEG  +KKRYAVFN DGTLAELKGFE+KRRGEL+LIK FQ+ +F+ FL
Sbjct: 936  GPYLAMVLPAAKEEGKKLKKRYAVFNFDGTLAELKGFEVKRRGELQLIKNFQSSVFEAFL 995

Query: 964  HGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLADYGEQKSCAV 1023
             GST+EECY++VA VA+ WLD+L ++G ++ DSEL + ISE+ +MSK L +YG QKS ++
Sbjct: 996  AGSTLEECYASVAKVADYWLDVLYSRGSNLPDSELFELISENKSMSKKLEEYGAQKSTSI 1055

Query: 1024 TTARRLSDFLGDTMVKDKGLRCQYIVACEPQGTPVSERAVPVAIFETDAEIMKFYLRKWC 1083
            +TA+RL++FLG+ MVKD GL C+YI++ +P+G PV+ERA+P+AIF+++  + + +LR+W 
Sbjct: 1056 STAKRLAEFLGEQMVKDAGLACKYIISKKPEGAPVTERAIPLAIFQSEPSVRRHHLRRWL 1115

Query: 1084 K--TSSDVGIRSIVDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLYKKVREK 1141
            K  T  D  IR ++DW+YY +RL   IQKIITIPAA+Q ++NPVPRV HPDWL+KK+ EK
Sbjct: 1116 KDNTMGDADIRDVLDWNYYIERLGGTIQKIITIPAALQGLANPVPRVQHPDWLHKKMLEK 1175

Query: 1142 EDKFRQRKLVDIFSSLKKDDFLNKTCNAETNLMDENVEDLEDFPKKRRNSVNGPRPIVRC 1201
             D  +QR++ ++F+S  K   L           ++ + D+ED   K         PIV  
Sbjct: 1176 NDVLKQRRINEMFTSRPKPKPLATE--------EDKLADMEDLAGKDGGEGAAGCPIV-- 1225

Query: 1202 FEVNNEQKTVKTTDQVDSLRQQLEPSEVSDQQPSSQNAIDTENIDRIVDYKGWLELKKRK 1261
                 ++K ++  +  D   ++ +P   + +Q         E    IV+   W+  +K+K
Sbjct: 1226 ----TKRKRIQLEEHDD---EEAQPQATTWRQALGAPPPIGETRKTIVE---WVRFQKKK 1275

Query: 1262 WKDNLDRRKKQKLGSLRASHQANGVSESLGDMINHKEAQRRTGVGSYFRRQETAMTRCHW 1321
            WK   D+R++ +  S R   +   V  + G             +G + RR +  +    W
Sbjct: 1276 WKWQQDQRQRNRQASKRTRGEDPPVVRATGSTAT---------LGGFLRRAQRTLLDQPW 1326

Query: 1322 QIIQLVPSSQSGVFLAWVVVEGIMVRIPITVPRLFYLN--SKDPIVEKFPGRRVNKTLPH 1379
            QI+QLVP    G F  W ++   + +I +TVPR+FY+N  S  P  E    R+VN+ LP 
Sbjct: 1327 QIVQLVPVDDLGHFTVWALIGEELHKIKLTVPRIFYVNQRSAAPPEEGQLWRKVNRVLPR 1386

Query: 1380 GRRSFNLIEVMIDEDQFRKESKKLAALLADPEVE 1413
             R  FNL    + E  FR  S  + A LA P++E
Sbjct: 1387 SRPVFNLYRYSVPEQLFRDNSLGMLADLATPDIE 1420



 Score =  264 bits (675), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 177/560 (31%), Positives = 287/560 (51%), Gaps = 39/560 (6%)

Query: 1442 LARYAHILWISDDGVPDLGGTSEEDECFADEVHQP---VLTYPGAYRKVSVELKIHHLSV 1498
            L R+  +LW S    PDLGG   +D     E  +    V    G Y  V VEL +  L+V
Sbjct: 1684 LQRHNFVLWWSASTRPDLGGREADDSRLLAEFEESISVVQNKAGFYPDVCVELALDSLAV 1743

Query: 1499 NALLKSNQVNEMEGGG-LFGFD-------QDMNSGPYNNELCGFDETTSSAPAFRVVKQL 1550
            +ALL+S ++ EMEG      FD       ++M        L  +DET   + AFRV++ +
Sbjct: 1744 SALLQSTRIQEMEGASSAITFDVMPQVSLEEMIGTVPAATLPSYDETALCSAAFRVMRSM 1803

Query: 1551 IQRCLTDAVTSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEFRK 1610
            +   L +   + N+F+D  + H YRW+ S ++ L+DP L R L+ +M+K+F  ++AEF++
Sbjct: 1804 VNGWLREVSINRNIFSDFQIVHFYRWVRSSNALLYDPALRRSLNNLMRKMFLRIIAEFKR 1863

Query: 1611 LGATIIFANFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLFMD 1670
            LGATII+A+F+++I+ +GK  +S A  Y D ++++L+ +E+F  I+L     W+ +L+MD
Sbjct: 1864 LGATIIYADFNRIILSSGKKTVSDALGYVDYIVQSLRNKEMFHSIQLSFEQCWNFMLWMD 1923

Query: 1671 QYNYGGIPARADESLDDDSQVDIVSSWNIAEYLPKEIQDHFVLVVSEFMY-IPWKHAQKL 1729
            Q N+ GI  +  + + D++   IVS+  I +    +  D      SE    +    A++ 
Sbjct: 1924 QANFSGIRGKLPKGI-DETVSSIVSTTMIRDSERNQDDDEDEEEDSENRDPVESNEAEQD 1982

Query: 1730 AASRASLQEGSSCTPSIT--VAAAENFESHIVQYVKGEISSYFTGKLLSIVR----DAIH 1783
                 SL+   +    +       E FES +  +++       T + +  +     D I 
Sbjct: 1983 QEDELSLELNWTIGEHLPDENECREKFESLLTLFMQSLAEKKTTEQAIKDISHCAFDFIL 2042

Query: 1784 HMKKMNNDQHNSPGVMQTAANIHKVDAPLEFIKHVCAAFALDQNVQHDVLVMRKNLLKYV 1843
             + K       SPG              LE I+ +  A ++D+ +   +  +R+N+L+ V
Sbjct: 2043 KLHKNYGKGKPSPG--------------LELIRTLIKALSVDKTLAEQINELRRNMLRLV 2088

Query: 1844 RVREFAPEAEFRDPCPSFILPNVICSYCNDCRDLDLCRDMALLAQD----WHCAMPQCGQ 1899
             + EF+  AE+ DPC S I+  VIC  CN CRDLDLC+D     +D    W CA  QC  
Sbjct: 2089 GIGEFSDLAEWEDPCDSHIINEVICKACNHCRDLDLCKDKHRAMKDGVPVWLCA--QCYV 2146

Query: 1900 PYDREVMENALLQIVRQRERLYHLQDLVCIRCNQVKAAHLAEQCACAGSFRCKEDASDFR 1959
             YD E +E  +L  ++++   Y LQDL C RC+++K  +LAE C CAG+F       D +
Sbjct: 2147 AYDNEEIEMRMLDALQRKMMSYVLQDLRCSRCSEIKRENLAEFCTCAGNFVPLISGKDIQ 2206

Query: 1960 SKMQIFLNIANRQGFQLLQE 1979
            + +  F  +A     QLLQ+
Sbjct: 2207 TLLGTFNKVAANHKMQLLQQ 2226


>gi|225678765|gb|EEH17049.1| DNA polymerase epsilon catalytic subunit A [Paracoccidioides
            brasiliensis Pb03]
          Length = 2232

 Score = 1363 bits (3528), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 701/1425 (49%), Positives = 947/1425 (66%), Gaps = 77/1425 (5%)

Query: 15   KKQKLIRSAEEELEAKLGYDLFSEGDKRLGWLLTFASSSLEDEDTRKVYSCIDLYFVSQD 74
            +K K +R A    EA +G+  F  G  R+GWL+   S+ LED       + ++ YF+   
Sbjct: 43   EKFKAVRLANSIDEA-MGFPRFESGKSRVGWLINMHSTILEDPKVPGGRAGVEYYFLEDI 101

Query: 75   GSTFKSKYKFRPYFYAATKEKMEMDVEAYLRRRYESQIADIEILEKEDLDLKNHLSGLHK 134
            G++FK+  ++ PYF  ATK   E +VE + +R +E  +  ++ +EKEDL + NHL G  +
Sbjct: 102  GTSFKATVEYDPYFLIATKRGHEGEVEEWCKRMFEGLVKSVKQVEKEDLQMPNHLLGYKR 161

Query: 135  SYLKISFDTVQQLMDVKKDLLHVVERNQAKFDAAEAYESILTG---------KREQRPQD 185
             +LK+SF  V  L++V++ +L + ++N+   +A + Y  + +          +   RP +
Sbjct: 162  MFLKLSFANVGHLLEVRRSILPIAQKNKKNVNAMDTYTEMASANVGFDLFDEEVNDRPHN 221

Query: 186  -FLDC---IVDLREYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLLEKRVDLLQRAEVHV 241
             F+D    IVD+REYDVPYH+R +ID D+R G+WY V   +    L    D L+RA+  V
Sbjct: 222  AFMDAGEFIVDIREYDVPYHVRVSIDKDIRIGKWYTVQSKNGIISLSCIEDRLKRADPVV 281

Query: 242  CAFDIETTKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGY 301
             A+DIETTKLPLKFPDA  D IMMISYM+DGQGYLI NRE V EDI D EYTPKPE+EG 
Sbjct: 282  LAYDIETTKLPLKFPDAVIDQIMMISYMIDGQGYLITNREIVSEDIADFEYTPKPEYEGP 341

Query: 302  FKVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQC 361
            F + N  +E   +  +FAH++EVKP +  TYNGD+FDWPF+E RA+  G  M  E+GF+ 
Sbjct: 342  FTIFNEPDEKSTIERFFAHIKEVKPTVIATYNGDFFDWPFVEARASIQGIDMYSEIGFR- 400

Query: 362  DKNQGECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKE 421
              +     + +  H+DCF+WV RDSYLPQGS+GLKAVT AKLGYDP E++PE M R+A E
Sbjct: 401  KSSDDIYESNYCVHMDCFSWVNRDSYLPQGSRGLKAVTVAKLGYDPDELDPEVMTRYASE 460

Query: 422  KPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAY 481
            +PQ +A YSVSDAVATYYLYM Y+HPFIFSL TIIP++P++VLRKG+GTLCEMLLMV+AY
Sbjct: 461  RPQTLAEYSVSDAVATYYLYMKYIHPFIFSLCTIIPLNPNDVLRKGTGTLCEMLLMVEAY 520

Query: 482  KANVICPNKHQSDPEKFYRNHLLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQLL 541
            + N+I PNKH    E F+  HLL+S+TY+GGHVE +E+GVFR+D+P +F ++ +A ++LL
Sbjct: 521  RGNIILPNKHTDPSESFWNGHLLDSQTYVGGHVESIEAGVFRNDIPVNFTIETAAIDELL 580

Query: 542  NNLDRDLQYAIKVEGKMDLESVSNYDEVKNAIMEKLLRLQEEPIREECPLIYHLDVAAMY 601
            ++LD  L+++I VE K  LE V+NYD++K  I  KLL L+E P R E P IYHLDVA+MY
Sbjct: 581  SDLDSALKFSITVEEKKSLEDVTNYDKIKAQIAAKLLNLKETPNRNERPTIYHLDVASMY 640

Query: 602  PNIILTNRLQPPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYYHLKKQIE 661
            PNI+ TNRLQP S++ +  C  CDFNRPGKTC R+L W WRGE    KR +Y  +++ + 
Sbjct: 641  PNIMTTNRLQPDSMIQESDCAVCDFNRPGKTCDRRLPWSWRGEFLPAKRDEYNMIRRAVA 700

Query: 662  SE-FVDGTNGHLSKSFLDLPKMEQQSRLKDRLKKYCQKAYKRVLDKPVTELREAGICMRE 720
            +E F   T     + F +L   EQ + +K RL+ Y +K Y ++ D    + REA IC RE
Sbjct: 701  NEKFPGKTPKSPMRMFDELSTSEQAAIVKKRLQDYSKKIYHKIHDSKTIQ-REAIICQRE 759

Query: 721  NSFYVDTVRSFRDRRYEYKGLNKVWKGKLSEAKASGN-SIKIQEAQDMVVLYDSLQLAHK 779
            N FYVDTVR+FRDRRY++KG  KVWKGK    KA+G  S+++ EA+ M++L+DSLQLAHK
Sbjct: 760  NPFYVDTVRNFRDRRYDFKGQQKVWKGKADALKAAGAPSVEVDEAKKMIILFDSLQLAHK 819

Query: 780  CILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLP 839
             ILNSFYGYVMRKG+RWYSMEMAGV   TGA IIQ AR L+E+IG+PLELDTDGIWC+LP
Sbjct: 820  VILNSFYGYVMRKGSRWYSMEMAGVTCLTGAHIIQMARELVERIGRPLELDTDGIWCMLP 879

Query: 840  GSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIE 899
             +FPENF F  K+  KKL ISYPCVMLN  V    TN QYQTLVDP +  YETHS+ +I 
Sbjct: 880  ATFPENFAFNLKN-GKKLPISYPCVMLNHLVHARFTNHQYQTLVDPKTFRYETHSDNTIF 938

Query: 900  FEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELF 959
            FEVDGPY+AMILP SKEE   +KKRYAVFN DG+LAELKGFE+KRRGELKLIK+FQ ++F
Sbjct: 939  FEVDGPYRAMILPTSKEEDKNLKKRYAVFNHDGSLAELKGFEVKRRGELKLIKIFQTQIF 998

Query: 960  DKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLADYGEQK 1019
              FL G+T+ E Y+AVA VANRWLD+L   G  +AD ELID I E+ +MSK+L +YG QK
Sbjct: 999  KFFLEGTTLAETYAAVAEVANRWLDVLHLHGTTLADEELIDLICENRSMSKTLEEYGNQK 1058

Query: 1020 SCAVTTARRLSDFLGDTMVKDKGLRCQYIVACEPQGTPVSERAVPVAIFETDAEIMKFYL 1079
            S ++TTA+RL++FLGD MVKDKGL C+YI++ +P+  P++ERA+PVAIF  +  + +F+L
Sbjct: 1059 STSITTAKRLAEFLGDQMVKDKGLNCKYIISAKPRNFPITERAIPVAIFSAEYNVKRFFL 1118

Query: 1080 RKWCKTS-SDVGIRSIVDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLYKKV 1138
            RKW K    D+  R+++DW YY +RL S IQK+ITIPAA+QKV NPVPRV HPDWL +++
Sbjct: 1119 RKWLKDDPGDMDPRTLIDWDYYLERLGSVIQKLITIPAALQKVRNPVPRVPHPDWLQQRI 1178

Query: 1139 REKEDKFRQRKLVDIFSSLKKDDFLNKTCNAETNLMDENVEDLEDFPKKRRNSVNGPRPI 1198
              K+DKF+Q+KL D+F  +   D         TN+MD  +    D       SV+  +  
Sbjct: 1179 NIKDDKFKQKKLTDLFEKIPLSDL-------PTNIMDHRLPSSGDMEDMVSQSVHKQK-- 1229

Query: 1199 VRCFEVNNEQKTVKTTDQVDSLRQQLEP-SEVSDQQPSSQNAIDTENIDRIVDYKGWLEL 1257
                 +N+  K+ +     D+   QL+P + +    PS              DY+ WL+ 
Sbjct: 1230 -----LNSVNKSSQKRKGPDNSTSQLDPFASLPATMPSMTE-----------DYEDWLKY 1273

Query: 1258 KKRKWKDNLDRR-KKQKLGSLRASHQANGVSESLGDMINHKEAQRRTGVGSYFRRQETAM 1316
            +K+KWK     R +++KL   R S  +N                    +G++FR Q   +
Sbjct: 1274 QKQKWKIQKQARIRRRKLFGERTSTTSN-------------------AIGNFFRNQAELI 1314

Query: 1317 TRCHWQIIQLVPSSQSGVFLAWVVVEGIMVRIPITVPRLFYLNSKDPIVEKFPG------ 1370
                WQI+QL  +   G    +V+++  +  + I VPR  ++N K    E  P       
Sbjct: 1315 YVKTWQILQLKETDIPGEVRMFVLIDHKIHALTIKVPRQIFINLK---CEDLPDVDLAGC 1371

Query: 1371 --RRVNKTLPHGRRSFNLIEVMIDEDQFRKESKKLAALLADPEVE 1413
              ++VN +LP+G  S +L ++ + ED + KE+ K++ LL  P VE
Sbjct: 1372 SVQKVNHSLPNGHPSVHLFKMTMPEDTYLKEADKISLLLNHPSVE 1416



 Score =  253 bits (645), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 174/637 (27%), Positives = 305/637 (47%), Gaps = 67/637 (10%)

Query: 1403 LAALLADPEVEVLGWQQNAAKIGMQRCAASSQWFNERISLARYAHI-------------- 1448
            L A  +D ++  LGWQ    K  +    A   W      LARY  +              
Sbjct: 1608 LKAEASDNDLPPLGWQSFVVKQIIMHYLALGSWLYHLGELARYGDVPICNLEKDDPKYLI 1667

Query: 1449 --------------LWISDDGVPDLGGTSEEDECFA--DEVHQPVLTYPGAYRKVSVELK 1492
                          LW S   +PD  G  E+D+      +V  P    PGAY  V +E++
Sbjct: 1668 DIAYARRLEQNNIVLWWSPSPLPDHAGY-EKDDILGPIHKVDMPSRNNPGAYSSVCIEVE 1726

Query: 1493 IHHLSVNALLKSNQVNEMEGG--GLFGFDQDMNSGPYNNELCGFDETTSSAPAFRVVKQL 1550
            + +L++N +L S+ VNE+EG    L       +SG  +     + +T  ++    V++ L
Sbjct: 1727 VRNLAINTILTSSLVNELEGSESTLLNPVAPNDSGASDGTGVLYSDTAFASAGILVLRDL 1786

Query: 1551 IQRCLTDAVTSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEFRK 1610
            ++    +A   G   AD ++QHL RW+ S  S L+D  LH  +  + +K F  L+ +FR+
Sbjct: 1787 VRSWWAEAC-QGKGMADIMVQHLIRWVESSDSFLYDRSLHHHVQMMSKKAFQQLMTDFRR 1845

Query: 1611 LGATIIFANFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLFMD 1670
            +G+ IIFA+ S++++ T K ++  A AY   +LK+++ + LF +++LE   +W  L++ D
Sbjct: 1846 VGSQIIFASPSRLLLQTNKGEVGNAYAYSQYILKSIKEKPLFHFLDLEIKEYWDYLVWYD 1905

Query: 1671 QYNYGGIPARADESLDDDSQ-VDIVSSWNIAEYLPKEIQDHFVLVVSEFMYIPWKHAQKL 1729
            ++N+GG      E ++ ++Q ++ V  W ++++LP+ +Q  F+  V E  YI   H  K 
Sbjct: 1906 EFNFGG--KGCHEVVEAENQELETVMHWQLSQFLPRPLQSVFLDWVVE--YIELMHGLK- 1960

Query: 1730 AASRASLQEGSSCTP--------SITVAAAENFESHIVQYVKGEISSYFTGKLLSIVRDA 1781
               R +++ G++ TP        SIT    E   S + +     +     G L+   RD 
Sbjct: 1961 ---RPTVENGNTSTPRATQLSFQSITNIDTEEMTSILTESFSKPLKRQIAG-LIRRQRDE 2016

Query: 1782 IHHMKKMNNDQHNS-PGVMQTAANIHKVDAPLEFIKHVCAAFALDQNVQHDVLVMRKNLL 1840
            + H +  ++    + PG        H+ +  LE +K +    +L +    +  V+R++LL
Sbjct: 2017 LLHPELASDYVFPTLPGASWRPTK-HERNPTLELVKSLMQVLSLCKTTTLETRVLRRDLL 2075

Query: 1841 KYVRVREFAPEAEFRDPCPSFILPNVICSYCNDCRDLDLCRDMALLAQD----------- 1889
                V+EF+ E  F +P  S   P +ICS+C   RDLD+CRD  +L ++           
Sbjct: 2076 ALFEVKEFSDEGRFENPSGSLKFPLLICSHCTMARDLDICRDGDILPENDAESNNAATKP 2135

Query: 1890 WHCAMPQCGQPYDREVMENALLQIVRQRERLYHLQDLVCIRCNQVKAAHLAEQCACAGSF 1949
            W C    CG  YDR  +E  L+   +     +  QDL C +CN ++ +   E C+C+G++
Sbjct: 2136 WCCLF--CGTEYDRLALEEQLIGQAQGLVVEWQTQDLKCSKCNNLRVSEFMEHCSCSGNW 2193

Query: 1950 RCKEDASDFRSKMQIFLNIANRQGFQLLQECTSWILE 1986
                D      K+++F +++   G ++L   T+ +LE
Sbjct: 2194 IETVDLRAIEKKLKLFKSVSEFYGLKMLMTITNGVLE 2230


>gi|198450202|ref|XP_001357879.2| GA19850 [Drosophila pseudoobscura pseudoobscura]
 gi|198130933|gb|EAL27015.2| GA19850 [Drosophila pseudoobscura pseudoobscura]
          Length = 2242

 Score = 1363 bits (3528), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 697/1421 (49%), Positives = 957/1421 (67%), Gaps = 70/1421 (4%)

Query: 25   EELEAKLGYDLFSEGDKRLGWLLTFASSSLEDEDTRKVYSCIDLYFVSQDGSTFKSKYKF 84
            +++++K G+D   +  +R G+L+   ++ + DED R++ + +DL+F+  DGS FK    +
Sbjct: 40   DKIDSKYGFDRVKDSQERTGYLINMHANEVLDED-RRLIAALDLFFIQMDGSRFKCTVAY 98

Query: 85   RPYFYAATKEKMEMDVEAYLRRRYESQIADIEILEKEDLDLKNHLSGLHKSYLKISFDTV 144
            +PY      + M ++V  +L R+Y  QIA +E + KEDLDL NHLSGL ++YLK+SF   
Sbjct: 99   KPYLLVRPDDNMHLEVARFLGRKYSGQIASLEHISKEDLDLPNHLSGLQQNYLKLSFLNQ 158

Query: 145  QQLMDVKKDLLHVVERNQAKFDAAEAYESILTGKREQ-----------RPQDFLDCIVDL 193
              +  V+++L+  V RN  +  +   Y  +L     Q           R QD++DCI+D+
Sbjct: 159  TAMTKVRRELMAAVRRNTERQKSNTYYMQMLATSLAQSSANTEEGLGKRQQDYMDCIMDI 218

Query: 194  REYDVPYHIRFAIDNDVRCGQWYDVSISST--GPLLEKRVDLLQRAEVHVCAFDIETTKL 251
            RE+DVPYH+R +ID  + CG WY++   S    P +  R D+L R E  V AFDIETTKL
Sbjct: 219  REHDVPYHVRVSIDLRIFCGLWYNIRCRSGVEMPHISPRPDILDRPEPVVLAFDIETTKL 278

Query: 252  PLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNVNNEI 311
            PLKFPDA  D IMMISYM+DGQG+LI NRE +  +++D EYTPKPEFEG F V N +NE+
Sbjct: 279  PLKFPDAQTDQIMMISYMIDGQGFLITNREIISSNVDDFEYTPKPEFEGNFVVYNEDNEM 338

Query: 312  ELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDKNQGECRAK 371
            +LL+ +F H+ EV+P I VTYNGD+FDWPF+ETRAA +   M +E+GF   ++ G   ++
Sbjct: 339  QLLQKFFDHIMEVRPHIIVTYNGDFFDWPFVETRAAVYDLDMKQEIGFSKMRD-GIYLSR 397

Query: 372  FACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQMMASYSV 431
             + H+DC  WVKRDSYLP GSQGLKAV KAKL YDP+E++PEDM R A E+PQ++A+YSV
Sbjct: 398  PSIHMDCLCWVKRDSYLPVGSQGLKAVAKAKLRYDPVELDPEDMCRMAVEQPQVLANYSV 457

Query: 432  SDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVICPNKH 491
            SDAVATYYLYM YVHPFIF+L TIIPM PDE+LRKGSGTLCE LLMV+AY AN++ PNK 
Sbjct: 458  SDAVATYYLYMKYVHPFIFALNTIIPMEPDEILRKGSGTLCETLLMVEAYHANIVYPNKQ 517

Query: 492  QSDPEKFYR-NHLLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQLLNNLDRDLQY 550
            Q++  K     H+L+SETY+GGHVE LESGVFR+D+P  F+LDP+  +QL+  +D  L++
Sbjct: 518  QAELNKLSNEGHVLDSETYVGGHVEALESGVFRADIPCRFRLDPTMVKQLMEQIDGVLRH 577

Query: 551  AIKVEGKMDLESVSNYDEVKNAIMEKLLRLQEEPIREECPLIYHLDVAAMYPNIILTNRL 610
            AI VE  + +E V N +EVK  I++ L  L + P R E P+IYHLDV AMYPNIILTNRL
Sbjct: 578  AIVVEEGIPMEQVLNLEEVKQEILQGLQGLHDIPNRLEQPVIYHLDVGAMYPNIILTNRL 637

Query: 611  QPPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYYHLKKQIESE-FVDGTN 669
            QP ++V+D  C ACDFN+PG  C R ++W+WRGE+    R+++  +++Q+E+E F     
Sbjct: 638  QPSAMVSDLDCAACDFNKPGVRCKRSMDWLWRGEMLPASRNEFQRIQQQLETEKFPSLFP 697

Query: 670  GHLSKSFLDLPKMEQQSRLKDRLKKYCQKAYKRV-LDKPVTELREAGICMRENSFYVDTV 728
            G  +++F +L K +Q +  K RL  YC+KAYK+  L K   E R + IC +ENSFYVDTV
Sbjct: 698  GGPTRAFHELSKEDQAAYEKKRLSDYCRKAYKKTKLTK--LETRNSTICQKENSFYVDTV 755

Query: 729  RSFRDRRYEYKGLNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHKCILNSFYGY 788
            R+FRDRRYEYKGL KV K  ++ A ASG++ +I+ A+   VLYDSLQLAHKCILNSFYGY
Sbjct: 756  RAFRDRRYEYKGLTKVAKASVTSAVASGDAAEIKAAKGREVLYDSLQLAHKCILNSFYGY 815

Query: 789  VMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLPGSFPENFTF 848
            VMR+GARW+SM MAG+V  TG+ II  AR +IE++G+PLELDTDGIWC+LPGSFP+ FT 
Sbjct: 816  VMRRGARWHSMPMAGIVCLTGSNIITKAREIIERVGRPLELDTDGIWCILPGSFPQEFTV 875

Query: 849  KTK-DLKKKLTISYPCVMLNVDVARNNTNDQYQTLV--------DPVSKTYETHSECSIE 899
            +T  + KKK+ ISYP  +LN  V  + TNDQY  L         DP  + Y+   E SI 
Sbjct: 876  QTSHEKKKKINISYPNAVLNTMVKDHFTNDQYHELRKNEDKEGEDPAPQ-YDIRDENSIF 934

Query: 900  FEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELF 959
            FEVDGPY AM+LPA+KEEG  +KKRYAVFN DG+LAELKGFE+KRRGEL+LIK FQ+ +F
Sbjct: 935  FEVDGPYLAMVLPAAKEEGKKLKKRYAVFNFDGSLAELKGFEVKRRGELQLIKNFQSSVF 994

Query: 960  DKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLADYGEQK 1019
            + FL GST+EECY +VA VA+ WLD+L ++G ++ DSEL + I+E+ +MSK L +YG QK
Sbjct: 995  EAFLAGSTLEECYGSVAKVADYWLDVLYSRGSNLPDSELFELIAENKSMSKKLEEYGAQK 1054

Query: 1020 SCAVTTARRLSDFLGDTMVKDKGLRCQYIVACEPQGTPVSERAVPVAIFETDAEIMKFYL 1079
            S +++TA+RL++FLG+ MVKD GL C+YI++ +P+G PV+ERA+P+AIF+++A + + +L
Sbjct: 1055 STSISTAKRLAEFLGEQMVKDAGLACKYIISKKPEGAPVTERAIPLAIFQSEASVRRHHL 1114

Query: 1080 RKWCK--TSSDVGIRSIVDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLYKK 1137
            R+W K  T  D  IR ++DW+YY +RL   IQKIITIPAA+Q ++NPVPRV HPDWL+KK
Sbjct: 1115 RRWLKDNTMGDADIRDVLDWNYYIERLGGTIQKIITIPAALQGLANPVPRVQHPDWLHKK 1174

Query: 1138 VREKEDKFRQRKLVDIFSSLKKDDFLNKTCNAETNLMDENVE--DLEDFPKKRRNSVNGP 1195
            + EK D  +QR++ +IF+S  K          +  L D+ +E  D+ED   K      G 
Sbjct: 1175 MLEKNDVLKQRRINEIFTSRPK---------PKPALEDKQLELRDMEDLAGKEIEDPTGL 1225

Query: 1196 RPIVRCFEVNNEQKTVKTTDQVDSLRQQL-EPSEVSDQQPSSQNAIDTENIDRIVDYKGW 1254
              + +   V  ++   + T Q  + RQ L  P  + D + +            IV+   W
Sbjct: 1226 PMVTKRKRVQLDEGEEEETPQATTWRQALGAPPAIGDTRKT------------IVE---W 1270

Query: 1255 LELKKRKWKDNLDRRKKQKLGSLRASHQANGVSESLGDMINHKEAQRRTGVGSYFRRQET 1314
            +  +K+KWK   ++R++ +  S R  ++   +  + G             +G + RR + 
Sbjct: 1271 VRFQKKKWKWQQEQRQRSRQASKRVRNEEAPIPRAPGAT---------ATLGGFLRRAQR 1321

Query: 1315 AMTRCHWQIIQLVPSSQSGVFLAWVVVEGIMVRIPITVPRLFYLN--SKDPIVEKFPGRR 1372
             +    WQI+QLVP    G F  W ++   + RI +TVPR+FY+N  S  P  E    R+
Sbjct: 1322 TLLDQPWQILQLVPVDDLGHFTVWALIGEELHRIKLTVPRIFYVNQRSAAPPEEGQLWRK 1381

Query: 1373 VNKTLPHGRRSFNLIEVMIDEDQFRKESKKLAALLADPEVE 1413
            VN+ LP  R  FNL    + E  FR  S  + A LA P++E
Sbjct: 1382 VNRVLPRSRPMFNLYRYSVPEQLFRDNSLGMLADLATPDIE 1422



 Score =  268 bits (685), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 175/563 (31%), Positives = 285/563 (50%), Gaps = 41/563 (7%)

Query: 1442 LARYAHILWISDDGVPDLGGTSEEDECFADEVHQP---VLTYPGAYRKVSVELKIHHLSV 1498
            L R+  +LW S    PDLGG   +D     E  +    V    G Y  V VEL +  L+V
Sbjct: 1686 LQRHNFVLWWSASTRPDLGGREADDSRLLAEFEENISVVQNKAGFYPDVCVELALDSLAV 1745

Query: 1499 NALLKSNQVNEMEGGG-LFGFD-------QDMNSGPYNNELCGFDETTSSAPAFRVVKQL 1550
            +ALL+SN++ EMEG      FD       ++M        L  +DET   + AFRV++ +
Sbjct: 1746 SALLQSNKIQEMEGASSAITFDVMPQASLEEMIGTVPAATLPSYDETALCSAAFRVMRSM 1805

Query: 1551 IQRCLTDAVTSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEFRK 1610
            +   L +   + N+F+D  + H YRW+ S ++ L+DP L R L+ +M+K+F  ++AEF++
Sbjct: 1806 VNGWLREVSINQNIFSDFQIVHFYRWVRSSNALLYDPALRRSLNNLMRKMFLRIIAEFKR 1865

Query: 1611 LGATIIFANFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLFMD 1670
            LGATI++A+F+++I+ +GK  +S A  Y D ++++L+ +E+F  I+L     W+ +L++D
Sbjct: 1866 LGATIVYADFNRIILSSGKKTVSDALGYVDYIVQSLRNKEMFHSIQLSFEQCWNFMLWLD 1925

Query: 1671 QYNYGGIPARADESLDD--DSQVDIVSSWNIAEYLPKEIQDHFVLVVSEFMYIPWKHAQK 1728
            Q N+ GI  +  + +D+   S V             ++  D       E    P  +A +
Sbjct: 1926 QANFSGIRGKLPKGIDETVSSIVSTTMRQERDRNREEDDDDDDDDDEEEENRDPSANADQ 1985

Query: 1729 LAASRASLQEGSSCTPSITVA----AAENFESHIVQYVKGEISSYFTGKLLSIVR----D 1780
               +   L    + T    +       E FES I  +++       T + +  +     D
Sbjct: 1986 EPEAEDELALELNWTIGERLPEENECREKFESLITLFMQSLAERKTTEQAIRDISHCAFD 2045

Query: 1781 AIHHMKKMNNDQHNSPGVMQTAANIHKVDAPLEFIKHVCAAFALDQNVQHDVLVMRKNLL 1840
             I  + K       SPG              LE I+ +    ++D+ +   +  +R+N+L
Sbjct: 2046 FILKLHKNYGKGKPSPG--------------LELIRTMIKVLSVDKTLAEQINELRRNML 2091

Query: 1841 KYVRVREFAPEAEFRDPCPSFILPNVICSYCNDCRDLDLCRDMALLAQD----WHCAMPQ 1896
            + V + EF+  AE++DPC S+I+  VIC  CN CRDLDLC+D     +D    W CA  Q
Sbjct: 2092 RLVGIGEFSDMAEWQDPCDSYIINEVICKACNHCRDLDLCKDKHRAMKDGIPVWLCA--Q 2149

Query: 1897 CGQPYDREVMENALLQIVRQRERLYHLQDLVCIRCNQVKAAHLAEQCACAGSFRCKEDAS 1956
            C   YD E +E  +L  ++++   + LQDL C RCN++K  +LAE C CAG+F       
Sbjct: 2150 CYVAYDNEEIEMRMLDALQRKMMSFVLQDLRCARCNEIKRENLAEFCTCAGNFVPLISGK 2209

Query: 1957 DFRSKMQIFLNIANRQGFQLLQE 1979
            D ++ +Q F  +A     QLLQ+
Sbjct: 2210 DIQTLLQTFSKVATNHKMQLLQQ 2232


>gi|452978339|gb|EME78103.1| hypothetical protein MYCFIDRAFT_145935 [Pseudocercospora fijiensis
            CIRAD86]
          Length = 2222

 Score = 1362 bits (3525), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 698/1409 (49%), Positives = 933/1409 (66%), Gaps = 93/1409 (6%)

Query: 32   GYDLFSEGDKRLGWLLTFASSSLEDEDTRKVYSCIDLYFVSQDGSTFKSKYKFRPYFYAA 91
            G++ F  G KR GWL+   S+++ED       + +D YF+  DG  FK+  +++PYF   
Sbjct: 59   GFERFEAGKKRQGWLINMHSTAIEDSKIPGGRAAVDFYFIGDDGEQFKASVEYQPYFLIG 118

Query: 92   TKEKMEMDVEAYLRRRYESQIADIEILEKEDLDLKNHLSGLHKSYLKISFDTVQQLMDVK 151
             K+  E +VE + RR +E  I  +E ++KEDL + NHL G  +++LK+ F  V  L+ V+
Sbjct: 119  VKKGREPEVEEWARRSFEGLITRVERVDKEDLKMPNHLLGYRRTFLKLLFANVTDLLAVR 178

Query: 152  KDLLHVVERNQAKFDAAEAYESILTG-----------KREQRPQ---DFLDCIVDLREYD 197
            + +L + E+N++K  A + Y  + +            +R++RP    D  D I+D+REYD
Sbjct: 179  RAILPIAEKNKSKVSAMDTYAEVASANAGFDMFEDGAERDRRPTGIADASDFILDIREYD 238

Query: 198  VPYHIRFAIDNDVRCGQWYDVSISSTGPLLEKRVDLLQRAEVHVCAFDIETTKLPLKFPD 257
            VPYH+R +ID D+R G+WY+V        L    D L RA+  V A+DIETTKLPLKFPD
Sbjct: 239  VPYHVRVSIDMDIRIGKWYEVEAKHGHVKLRCLEDRLTRADPVVMAYDIETTKLPLKFPD 298

Query: 258  ADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNVNNEIELLRLW 317
            A  D IMMISYM+DGQG+LI NRE V EDI+D EYTPKPEFEG F + N  NE  ++  +
Sbjct: 299  AAIDQIMMISYMIDGQGFLITNREIVSEDIQDFEYTPKPEFEGPFIIFNEANEEAVIERF 358

Query: 318  FAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDKNQGECRAKFAC-HL 376
            F+ ++E +P I VTYNGD+FDWPF+E RA+ HG  M +E+GF+  KN  +      C H+
Sbjct: 359  FSCIKEARPTIMVTYNGDFFDWPFVEARASVHGIDMYQEIGFR--KNSEDIYQSTHCAHM 416

Query: 377  DCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQMMASYSVSDAVA 436
            D FAWV RDSYLPQGS+GLKAVT AKLGYDP E++PE M  +A+E+PQ +A YSVSDAVA
Sbjct: 417  DAFAWVNRDSYLPQGSRGLKAVTVAKLGYDPDELDPELMTPYAQERPQTLAEYSVSDAVA 476

Query: 437  TYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVICPNKHQSDPE 496
            TYYLYM YVHPFIFSL TIIP+ PD+VLRKG+GTLCEMLLMVQAY+  ++ PNKH    E
Sbjct: 477  TYYLYMKYVHPFIFSLCTIIPLGPDDVLRKGTGTLCEMLLMVQAYQKEIVLPNKHVQPRE 536

Query: 497  KFYRNHLLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQLLNNLDRDLQYAIKVEG 556
             F+  HLLESETY+GGHVE +E GVFRSD+PT+F +D +A ++LL  LD  L++ I VE 
Sbjct: 537  SFWEGHLLESETYVGGHVESIECGVFRSDIPTNFAVDTTAIDELLEELDDALKFTITVEE 596

Query: 557  KMDLESVSNYDEVKNAIMEKLLRLQEEPIREECPLIYHLDVAAMYPNIILTNRLQPPSIV 616
            K  ++ V NYDEVK  I ++L +L+  P R E PLIYHLDVA+MYPNI+ TNRLQP S++
Sbjct: 597  KKSMDDVENYDEVKAQITDRLQKLRATPNRSERPLIYHLDVASMYPNIMTTNRLQPDSMI 656

Query: 617  TDEVCTACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYYHLKKQIESEFVDGTNGH-LSKS 675
             +  C ACDFNRPGKTC R++ W WRGE    KR +Y  ++  +E+E   G   + LS+S
Sbjct: 657  DESACAACDFNRPGKTCDRRMPWSWRGEFLPAKRDEYNMIRHALENERFPGKFANSLSRS 716

Query: 676  FLDLPKMEQQSRLKDRLKKYCQKAYKRVLDKPVTELREAGICMRENSFYVDTVRSFRDRR 735
            F DL   EQ S +K RL  Y +K Y ++ D    E REA IC REN FYVDTV+ FRDRR
Sbjct: 717  FQDLNLDEQTSFVKKRLTDYSKKIYHKIHDTKTIE-REAIICQRENPFYVDTVKDFRDRR 775

Query: 736  YEYKGLNKVWKGKLSEAKASGNSI-KIQEAQDMVVLYDSLQLAHKCILNSFYGYVMRKGA 794
            Y++KG  KVWKGK S+ +  G S  ++ EA+ M+VL+DSLQLAHK ILNSFYGYVMRKG+
Sbjct: 776  YDFKGKQKVWKGKASDLEKGGASKDEVDEAKKMIVLFDSLQLAHKVILNSFYGYVMRKGS 835

Query: 795  RWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLPGSFPENFTFKTKDLK 854
            RWYSMEMAGV   TGA+IIQ AR  +E++G+PLELDTDGIWC+LP +FPENF FK K+  
Sbjct: 836  RWYSMEMAGVTCLTGARIIQMARERVERLGRPLELDTDGIWCILPATFPENFAFKLKN-G 894

Query: 855  KKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEFEVDGPYKAMILPAS 914
            KK+T+SYPC                  LVDP +  YETHS+ +I FEVDGPYKAMILP S
Sbjct: 895  KKMTVSYPC------------------LVDPSTFKYETHSDNTIFFEVDGPYKAMILPTS 936

Query: 915  KEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFLHGSTIEECYSA 974
            KEE   +KKRYAVFNDDG+LAELKGFE+KRRGELKLIK+FQ ++F  FL GST+EE Y A
Sbjct: 937  KEEDKNLKKRYAVFNDDGSLAELKGFEVKRRGELKLIKIFQQQIFKFFLEGSTLEEVYHA 996

Query: 975  VAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLADYGEQKSCAVTTARRLSDFLG 1034
            VA VAN+WLD+L + G  +AD ELID I E+ +MSK+L +YG+QKS A+TTA+RL++FLG
Sbjct: 997  VAKVANKWLDVLHSHGSTLADEELIDLICENKSMSKTLEEYGQQKSTAITTAKRLAEFLG 1056

Query: 1035 DTMVKDKGLRCQYIVACEPQGTPVSERAVPVAIFETDAEIMKFYLRKWCKTS-SDVGIRS 1093
            + M+KDKGL C+YI++ +P+  PV+ERA+PVAIF  D  + ++YL+KW +   S +  R 
Sbjct: 1057 EQMIKDKGLNCKYIISAKPKTAPVTERAIPVAIFSADESVKRYYLKKWLREEPSSLDPRD 1116

Query: 1094 IVDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLYKKVREKEDKFRQRKLVDI 1153
            I+DW YY +RL S IQK+ITIPAA+QKV NP P+V HP+WL +++R K+D F+Q K+ D+
Sbjct: 1117 ILDWGYYLERLGSQIQKLITIPAALQKVRNPCPKVPHPEWLERRIRMKDDVFKQVKMTDM 1176

Query: 1154 FSSLKKDDFLNKTCNAETNLMDENVEDLEDFPKKRRNSVNGPRPIVRCFEVNNEQKTVKT 1213
            FS   K     +  NA   +      DLEDF         G  P+       N+ K   T
Sbjct: 1177 FS---KRPLAERDANA---VPARTGGDLEDF---------GATPM-------NKLKPAAT 1214

Query: 1214 TDQVDSLRQQLEPSEVSDQQPSSQNAIDT--ENIDRIV-DYKGWLELKKRKWKDNLDRRK 1270
               + S +++       +  P++ N  D   +++  I  DY+GWL+ +K+KWK     RK
Sbjct: 1215 AKLISSQKRK----NREEPAPAAVNPFDALPKDMPSITEDYQGWLKYQKQKWKIQKAARK 1270

Query: 1271 KQKLGSLRASHQANGVSESLGDMINHKEAQRRTGVGSYFRRQETAMTRCHWQIIQLVPSS 1330
            +++                   +   K A     +G++FR Q   +    WQI+QL  + 
Sbjct: 1271 RRR------------------QLFGEKRADANDAIGTFFRNQAELLYTTDWQILQLRDTD 1312

Query: 1331 QSGVFLAWVVVEGIMVRIPITVPRLFYLNSK-----DPIVEKFPGRRV-NKTLPHGRRSF 1384
             +G   A+V+++  + ++ + VPR  YLN K     D  ++     +V N TLP+G  S 
Sbjct: 1313 IAGEVKAFVLIDKKVHQLKVVVPRQVYLNLKEDDLPDVDIKGVQAEKVINHTLPNGHSST 1372

Query: 1385 NLIEVMIDEDQFRKESKKLAALLADPEVE 1413
            +L ++ + E  + KES++LA L     VE
Sbjct: 1373 HLFKLTMPEQVYVKESEQLAVLFNHHAVE 1401



 Score =  252 bits (644), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 173/634 (27%), Positives = 290/634 (45%), Gaps = 65/634 (10%)

Query: 1400 SKKLAALLADPEVEVLGWQQNAAKIGMQRCAASSQWFNERISLARYAHI----------- 1448
            S +L A   D ++  LGWQ   A+  +        W +  +  ARY ++           
Sbjct: 1589 SLRLKANETDKQLPPLGWQSIVARRLVSHYLDLGLWISHLLEFARYGNVPLGNLEVDDPR 1648

Query: 1449 -----------------LWISDDGVPDLGGTSEEDECFADEV-HQPVLTYPGAYRKVSVE 1490
                             LW S D  PD  G   +D     EV   P +  PG Y  V ++
Sbjct: 1649 FLIDIAYARRLQKEKVVLWWSQDARPDHAGHERDDVLSGMEVVEMPAINTPGTYSSVCID 1708

Query: 1491 LKIHHLSVNALLKSNQVNEMEGGGL--FGFDQDMNSGPYNNELCGFDETTSSAPAF---- 1544
            L + +L++N +L S  +N+ EG G    G      +G   + L    +T  S  AF    
Sbjct: 1709 LSVKNLAINTILSSAVLNDAEGAGADPLGIS---GAGAKEDALDETAQTIQSENAFAAAG 1765

Query: 1545 -RVVKQLIQRCLTDAVTSG--NVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVF 1601
               ++++++    +A  S   N  AD ++QHL RW+ SP S L+D  LH  +  + +K F
Sbjct: 1766 ISALREMVRAWWQEACNSKTQNSMADVLVQHLLRWIESPSSHLYDRNLHYYVQVMSKKAF 1825

Query: 1602 AMLLAEFRKLGATIIFANFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVH 1661
              L+ EFR++G+ ++FAN  ++++ T K ++  A AY + +LK +  R  F +++L    
Sbjct: 1826 QQLINEFRRVGSHVVFANAGRLLLQTSKAEVGNAYAYSEYILKTISQRPAFHFLDLSITE 1885

Query: 1662 FWHSLLFMDQYNYGGIPARADESLDDDS-QVDIVSSWNIAEYLPKEIQDHFVLVVSEFMY 1720
            FW  L + D++NYGG     ++ +D+DS Q+ ++  W +A +LP  +Q  F   + E  Y
Sbjct: 1886 FWDYLAWHDEFNYGG--KGCEKVVDEDSPQLQLIMHWQMATFLPPILQPTFEQWIVE--Y 1941

Query: 1721 IPWKHAQKLAASRASLQEGSSCTPSITVAAAENFESHI-VQYVKGEI-SSYFTGKLLSIV 1778
            I   HA+K     A L  GS+  P+     A  F+S    Q   G + S  F+  L   +
Sbjct: 1942 IELMHARKRP---AGLNNGSTPRPTQLPIHAAIFQSETDDQTTPGNVLSKTFSKPLKKQI 1998

Query: 1779 RDAIHHMKKMNNDQHNSPG---VMQTAANIHKVDAPLEFIKHVCAAFALDQNVQHDVLVM 1835
               I   +  +  +   P      Q  ++++  +  LE +K +     LD+ +  +  ++
Sbjct: 1999 AQLIQRQRTESMHEELVPDWTFPTQPGSHLNLQNPVLELVKSINEVLCLDKTISLEARLL 2058

Query: 1836 RKNLLKYVRVREFAPEAEFRDPCPSFILPNVICSYCNDCRDLDLCRDMALLAQD------ 1889
            RK LL    +REF+P+  + DP  S  +  + C  C   +D+DLC+DM L   D      
Sbjct: 2059 RKELLHLFEIREFSPDGNWIDPSASLPIKQISCPECCVPKDIDLCKDMDLAVIDPSDPSG 2118

Query: 1890 -----WHCAMPQCGQPYDREVMENALLQIVRQRERLYHLQDLVCIRCNQVKAAHLAEQCA 1944
                   C+   CG  +DR  +E  LL  V++   L+  QDL C +C +++     E C 
Sbjct: 2119 SASLVVKCSNADCGTVFDRLAIEERLLADVQKMAVLWMTQDLKCAKCGRIRTNEFMEHCG 2178

Query: 1945 CAGSFRCKEDASDFRSKMQIFLNIANRQGFQLLQ 1978
            CAG +R   D    R  +  F  ++   G ++L+
Sbjct: 2179 CAGEWRNTVDGKRLRDFLGTFGAVSRFFGMRMLE 2212


>gi|195446444|ref|XP_002070783.1| GK10841 [Drosophila willistoni]
 gi|194166868|gb|EDW81769.1| GK10841 [Drosophila willistoni]
          Length = 2251

 Score = 1361 bits (3523), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 696/1419 (49%), Positives = 957/1419 (67%), Gaps = 58/1419 (4%)

Query: 25   EELEAKLGYDLFSEGDKRLGWLLTFASSSLEDEDTRKVYSCIDLYFVSQDGSTFKSKYKF 84
            +++++K G+D   +  +R G+L+   ++ + DED R++ + +DL+F+  DGS FK    +
Sbjct: 37   DKIDSKYGFDRVKDSLERTGYLINMHANEVLDED-RRLTAALDLFFIQMDGSRFKCTVAY 95

Query: 85   RPYFYAATKEKMEMDVEAYLRRRYESQIADIEILEKEDLDLKNHLSGLHKSYLKISFDTV 144
            +PY     ++ M ++V  +L R+Y  QIA +E + KEDLDL NHL+GL + YLK+SF   
Sbjct: 96   KPYLLVRPEDNMHLEVARFLGRKYSGQIASLEHITKEDLDLPNHLAGLKQHYLKLSFLNQ 155

Query: 145  QQLMDVKKDLLHVVERNQAKFDAAEAYESILTGKREQ-----------RPQDFLDCIVDL 193
              +  V+++LL  V RN  +  +   Y  +L     Q           R  D+ DCI D+
Sbjct: 156  TTMTKVRRELLAAVRRNTERQKSNTYYMQMLASSLAQSSANTEDGSGKRQLDYFDCITDI 215

Query: 194  REYDVPYHIRFAIDNDVRCGQWYDVSISST--GPLLEKRVDLLQRAEVHVCAFDIETTKL 251
            RE+DVPYH+R +ID  + CGQWY++   S    P +  R D+L R E  V AFDIETTKL
Sbjct: 216  REHDVPYHVRVSIDLRIFCGQWYNIRCRSGVEMPTITCRPDILDRPEPVVLAFDIETTKL 275

Query: 252  PLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNVNNEI 311
            PLKFPDA  D IMMISYM+DGQGYLI NRE +  ++ED EYTPKPEFEG+F + N  NE+
Sbjct: 276  PLKFPDAQTDQIMMISYMIDGQGYLITNREIISSNVEDFEYTPKPEFEGHFIIFNEENEM 335

Query: 312  ELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDKNQGECRAK 371
            +LL+ +F H+ EV+P I VTYNGD+FDWPF+ETRAA +   M +E+GF   ++ G   ++
Sbjct: 336  QLLQKFFDHIMEVRPHIVVTYNGDFFDWPFVETRAAVYDLDMKQEIGFSKVRD-GNYLSR 394

Query: 372  FACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQMMASYSV 431
             + H+DC  WVKRDSYLP GSQGLKAV KAKL YDP+E++PEDM R A E+PQ++++YSV
Sbjct: 395  PSIHMDCLCWVKRDSYLPVGSQGLKAVAKAKLRYDPVELDPEDMCRMAVEQPQVLSNYSV 454

Query: 432  SDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVICPNKH 491
            SDAVATYYLYM YVHPFIF+L TIIPM PDE+LRKGSGTLCE LLMV+AY AN++ PNKH
Sbjct: 455  SDAVATYYLYMKYVHPFIFALNTIIPMEPDEILRKGSGTLCETLLMVEAYHANIVYPNKH 514

Query: 492  QSDPEKFYR-NHLLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQLLNNLDRDLQY 550
             S+  K     H+L+SETY+GGHVE LESGVFR+D+P  F+LDP+  +QL++ +D  L +
Sbjct: 515  MSELNKLSNEGHVLDSETYVGGHVEALESGVFRADIPCRFRLDPNMVKQLMDQVDAVLHH 574

Query: 551  AIKVEGKMDLESVSNYDEVKNAIMEKLLRLQEEPIREECPLIYHLDVAAMYPNIILTNRL 610
            AI VE  + L+ V+N  E K  I++ L  L + P R E P+IYHLDV AMYPNIILTNRL
Sbjct: 575  AIVVEEGIPLDKVTNLAETKQEIIQALQGLHDIPQRLEQPVIYHLDVGAMYPNIILTNRL 634

Query: 611  QPPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYYHLKKQIESE-FVDGTN 669
            QP ++VTD  C ACDFN+PG  C R ++W+WRGE+    R+++  +++Q+E+E F     
Sbjct: 635  QPSAMVTDLDCAACDFNKPGVRCKRSMDWLWRGEMLPASRNEFQRIQQQLETEKFPPLFP 694

Query: 670  GHLSKSFLDLPKMEQQSRLKDRLKKYCQKAYKRVLDKPVTELREAGICMRENSFYVDTVR 729
            G  +++F +L K +Q +  K RL  YC+KAYK+     + E R + IC +ENSFYVDTVR
Sbjct: 695  GGPTRAFHELSKEDQAAYEKKRLSDYCRKAYKKTKITKL-ETRNSTICQKENSFYVDTVR 753

Query: 730  SFRDRRYEYKGLNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHKCILNSFYGYV 789
            +FRDRRYEYKGL KV K  ++ A ASG++ +I+ A+   VLYDSLQLAHKCILNSFYGYV
Sbjct: 754  AFRDRRYEYKGLTKVAKASVTAAVASGDASEIKAAKGREVLYDSLQLAHKCILNSFYGYV 813

Query: 790  MRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLPGSFPENFTFK 849
            MR+GARW+SM MAG+V  TG+ II  AR +IE++G+PLELDTDGIWC+LPGSFP+ FT  
Sbjct: 814  MRRGARWHSMPMAGIVCLTGSNIITKAREIIERVGRPLELDTDGIWCILPGSFPQEFTIH 873

Query: 850  TK-DLKKKLTISYPCVMLNVDVARNNTNDQYQTLV----DPVSKTYETHSECSIEFEVDG 904
            T  + KKK+ ISYP  +LN  V  + TNDQY  L     D     YE   E SI FEVDG
Sbjct: 874  TTHEKKKKINISYPNAVLNTMVKDHFTNDQYHELKPSAGDGEPPAYELREENSIFFEVDG 933

Query: 905  PYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFLH 964
            PY AM+LPA+KEEG  +KKRYAVFN DG+LAELKGFE+KRRGEL+LIK FQ+ +F+ FL 
Sbjct: 934  PYLAMVLPAAKEEGKKLKKRYAVFNFDGSLAELKGFEVKRRGELQLIKNFQSSVFEAFLA 993

Query: 965  GSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLADYGEQKSCAVT 1024
            GST+EECY++VA VA+ WLD+L ++G ++ DSEL + ISE+ +MSK L +YG QKS +++
Sbjct: 994  GSTLEECYASVAKVADYWLDVLYSRGSNLPDSELFELISENKSMSKKLEEYGAQKSTSIS 1053

Query: 1025 TARRLSDFLGDTMVKDKGLRCQYIVACEPQGTPVSERAVPVAIFETDAEIMKFYLRKWCK 1084
            TA+RL++FLG+ MVKD GL C+YI++ +P+G PV+ERA+P+AIF+++  + + +LR+W K
Sbjct: 1054 TAKRLAEFLGEQMVKDAGLACKYIISKKPEGAPVTERAIPLAIFQSEQSVRRHHLRRWLK 1113

Query: 1085 --TSSDVGIRSIVDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLYKKVREKE 1142
              T  D  IR ++DW+YY +RL   IQKIITIPAA+Q ++NPVPRV HPDWL+KK+ EK 
Sbjct: 1114 DNTMGDADIRDVLDWNYYIERLGGTIQKIITIPAALQGLANPVPRVQHPDWLHKKMLEKN 1173

Query: 1143 DKFRQRKLVDIFSSLKKDDFLNKTCNAETNLMDENVEDL--EDFPKKRRNSVNGPRPIV- 1199
            D  +QR++ ++F+S  K     K         D ++EDL  +D P+   + +   RP+V 
Sbjct: 1174 DVLKQRRINEMFTSRPKP----KPAMERHEDKDLDMEDLAGKDGPE---DGLAAGRPVVT 1226

Query: 1200 --RCFEVNNEQKTVKTTDQVDSLRQQL-EPSEVSDQQPSSQNAIDTENIDRIVDYKGWLE 1256
              +  ++N+E +  +++    + RQ L  P  + + + +            IV+   W++
Sbjct: 1227 KRKRVQLNDEDE--ESSAAATTWRQALGAPPPIGETRKT------------IVE---WVK 1269

Query: 1257 LKKRKWKDNLDRRKKQKLGSLRASHQANGVSESLGDMINHKEAQRRTGVGSYFRRQETAM 1316
             +KRKW    ++R + +    R    A G  E+    +        T +G + RR + ++
Sbjct: 1270 FQKRKWAWQQEQRDRCRQAQKRQRAGAGGNEEASSSAMARSGPSAAT-LGGFLRRAQRSL 1328

Query: 1317 TRCHWQIIQLVPSSQSGVFLAWVVVEGIMVRIPITVPRLFYLN--SKDPIVEKFPGRRVN 1374
                WQI+QLVP    G F  W ++   + RI +TVPR+FY+N  S  P  E    R+VN
Sbjct: 1329 LDQPWQILQLVPVDDLGHFTVWALIGEELHRIKLTVPRIFYVNQRSAAPPEEGQLWRKVN 1388

Query: 1375 KTLPHGRRSFNLIEVMIDEDQFRKESKKLAALLADPEVE 1413
            + LP  R  +NL    + E  FR  S  + A LA P++E
Sbjct: 1389 RVLPRSRPVYNLYRYSVPEQVFRDNSLGMLADLATPDIE 1427



 Score =  166 bits (420), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 89/257 (34%), Positives = 150/257 (58%), Gaps = 11/257 (4%)

Query: 1442 LARYAHILWISDDGVPDLGGTSEEDECFADEVHQP---VLTYPGAYRKVSVELKIHHLSV 1498
            L R+  +LW S    PDLGG   +D     E  +    V    G Y  V VEL +  L+V
Sbjct: 1692 LQRHNFVLWWSASTRPDLGGREADDSRLLAEFEETISVVQNKAGFYGDVCVELALDSLAV 1751

Query: 1499 NALLKSNQVNEMEGGG-LFGFD-------QDMNSGPYNNELCGFDETTSSAPAFRVVKQL 1550
            +ALL+SN++ EMEG      FD       ++M        L  +DET   + AFRV++ +
Sbjct: 1752 SALLQSNKIQEMEGASSAITFDVMPQASLEEMIGTVPAATLPSYDETALCSAAFRVMRSM 1811

Query: 1551 IQRCLTDAVTSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEFRK 1610
            +   L +   + N+F+D  + H YRW+ S ++ L+DP L R L+ +M+K+F  ++AEF++
Sbjct: 1812 VNGWLREVSINRNIFSDFQIVHFYRWVRSSNALLYDPALRRSLNNLMRKMFLRIIAEFKR 1871

Query: 1611 LGATIIFANFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLFMD 1670
            LGATI++A+F+++I+ +GK  +S A  Y D ++++L+ +E+F  I+L     W+ +L++D
Sbjct: 1872 LGATIVYADFNRIILSSGKKSVSDALGYVDYIVQSLRNKEMFHSIQLSFEQCWNFMLWLD 1931

Query: 1671 QYNYGGIPARADESLDD 1687
            Q N+ GI  +  + +D+
Sbjct: 1932 QANFSGIRGKLPKGIDE 1948



 Score =  134 bits (338), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 69/180 (38%), Positives = 103/180 (57%), Gaps = 6/180 (3%)

Query: 1812 LEFIKHVCAAFALDQNVQHDVLVMRKNLLKYVRVREFAPEAEFRDPCPSFILPNVICSYC 1871
            LE I+ +    ++D+ +   +  +RKN+L+ V + EF+  AE+ DPC S+I+  VIC  C
Sbjct: 2072 LELIRTMVKVLSVDKTLAEQINELRKNMLRLVGIGEFSDLAEWTDPCDSYIINEVICKAC 2131

Query: 1872 NDCRDLDLCRDMALLAQD----WHCAMPQCGQPYDREVMENALLQIVRQRERLYHLQDLV 1927
            N CRDLDLC+D     +D    W CA  QC   YD E +E  ++ +++++   Y LQDL 
Sbjct: 2132 NHCRDLDLCKDKHRAMKDGIPVWLCA--QCYVAYDNEEIEMRMIDVLQRKLMSYVLQDLR 2189

Query: 1928 CIRCNQVKAAHLAEQCACAGSFRCKEDASDFRSKMQIFLNIANRQGFQLLQECTSWILEV 1987
            C RCN++K  +LAE C CAG+F       D +S +  F  +A+    QLLQE     L+ 
Sbjct: 2190 CARCNEIKRENLAEFCTCAGNFVPLISGKDIKSLLSTFSKVASNHKMQLLQETVQQALKT 2249


>gi|195502873|ref|XP_002098415.1| GE10366 [Drosophila yakuba]
 gi|194184516|gb|EDW98127.1| GE10366 [Drosophila yakuba]
          Length = 2238

 Score = 1361 bits (3523), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 699/1414 (49%), Positives = 950/1414 (67%), Gaps = 58/1414 (4%)

Query: 25   EELEAKLGYDLFSEGDKRLGWLLTFASSSLEDEDTRKVYSCIDLYFVSQDGSTFKSKYKF 84
            +++++K G+D   +  +R G+L+   S+ + DED R++ + +DL+F+  DGS FK    +
Sbjct: 40   DKIDSKYGFDRVKDSQERTGYLINMHSNEVLDED-RRLIAALDLFFIQMDGSRFKCTVAY 98

Query: 85   RPYFYAATKEKMEMDVEAYLRRRYESQIADIEILEKEDLDLKNHLSGLHKSYLKISFDTV 144
            +PY     ++ M ++V  +L R+Y  QI+ +E + KEDLDL NHLSGL + Y+K+SF   
Sbjct: 99   QPYLLIRPEDNMHLEVARFLGRKYSGQISALEHITKEDLDLPNHLSGLQQQYIKLSFLNQ 158

Query: 145  QQLMDVKKDLLHVVERNQAKFDAAEAYESILTGKREQ------------RPQDFLDCIVD 192
              +  V+++L+  V+RNQ +  +   Y  +L     Q            R QD++DCIVD
Sbjct: 159  TAMTKVRRELMSAVKRNQERQKSNTYYMQMLATSLAQSSAGSEDAALGKRQQDYMDCIVD 218

Query: 193  LREYDVPYHIRFAIDNDVRCGQWYDVSISSTG--PLLEKRVDLLQRAEVHVCAFDIETTK 250
            +RE+DVPYH+R +ID  + CGQWY++   S    P +  R D+L R E  V AFDIETTK
Sbjct: 219  MREHDVPYHVRVSIDLRIFCGQWYNIRCRSGVELPTITCRPDILDRPEPVVLAFDIETTK 278

Query: 251  LPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNVNNE 310
            LPLKFPDA  D +MMISYM+DGQGYLI NRE +  +++D EYTPKPEFEG F V N  NE
Sbjct: 279  LPLKFPDAQTDQVMMISYMIDGQGYLITNREIISSNVDDFEYTPKPEFEGNFIVFNEENE 338

Query: 311  IELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDKNQGECRA 370
            ++LL+ +F H+ EV+P I VTYNGD+FDWPF+ETRAA +   M +E+GF   ++ G   +
Sbjct: 339  MQLLQRFFDHIMEVRPHIIVTYNGDFFDWPFVETRAAVYDLDMKQEIGFSKLRD-GNYLS 397

Query: 371  KFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQMMASYS 430
            + A H+DC  WVKRDSYLP GSQGLKAV KAKL YDP+E++PEDM R A E+PQ++A+YS
Sbjct: 398  RPAIHMDCLCWVKRDSYLPVGSQGLKAVAKAKLRYDPVELDPEDMCRMAVEQPQVLANYS 457

Query: 431  VSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVICPNK 490
            VSDAVATYYLYM YVHPFIF+L TIIPM PDE+LRKGSGTLCE LLMV+AY A ++ PNK
Sbjct: 458  VSDAVATYYLYMKYVHPFIFALNTIIPMEPDEILRKGSGTLCETLLMVEAYHAQIVYPNK 517

Query: 491  HQSDPEKFY-RNHLLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQLLNNLDRDLQ 549
            HQS+  K     H+L+SETY+GGHVE LESGVFR+D+P  F+LDP+  +QL   +D  L+
Sbjct: 518  HQSELNKLSSEGHVLDSETYVGGHVEALESGVFRADIPCRFRLDPAMVKQLQEQVDAVLR 577

Query: 550  YAIKVEGKMDLESVSNYDEVKNAIMEKLLRLQEEPIREECPLIYHLDVAAMYPNIILTNR 609
            +AI+VE  + LE V N DEV+  I++ L  L + P R E P+IYHLDV AMYPNIILTNR
Sbjct: 578  HAIEVEEGIPLEKVLNLDEVRQEIVQGLQGLHDIPNRLEQPVIYHLDVGAMYPNIILTNR 637

Query: 610  LQPPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYYHLKKQIESE-FVDGT 668
            LQP ++V+D  C ACDFN+PG  C R ++W+WRGE+    R+++  +++Q+E+E F    
Sbjct: 638  LQPSAMVSDLDCAACDFNKPGVRCKRSMDWLWRGEMLPASRNEFQRIQQQLETEKFPPLF 697

Query: 669  NGHLSKSFLDLPKMEQQSRLKDRLKKYCQKAYKRV-LDKPVTELREAGICMRENSFYVDT 727
             G   ++F +L K +Q +  K RL  YC+KAYK+  L K   E R + IC +ENSFYVDT
Sbjct: 698  PGGPQRAFHELSKEDQAAYEKKRLTDYCRKAYKKTKLTK--LETRTSTICQKENSFYVDT 755

Query: 728  VRSFRDRRYEYKGLNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHKCILNSFYG 787
            VR+FRDRRYEYKGL KV K  ++ A ASG++ +I+ A+   VLYDSLQLAHKCILNSFYG
Sbjct: 756  VRAFRDRRYEYKGLTKVAKASVNAAVASGDAAEIKAAKGREVLYDSLQLAHKCILNSFYG 815

Query: 788  YVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLPGSFPENFT 847
            YVMR+GARW+SM MAG+V  TG+ II  AR +IE++G+PLELDTDGIWC+LPGSFP+ FT
Sbjct: 816  YVMRRGARWHSMPMAGIVCLTGSNIITKAREIIERVGRPLELDTDGIWCILPGSFPQEFT 875

Query: 848  FKTK-DLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKT---YETHSECSIEFEVD 903
              T  + KKK+ ISYP  +LN  V  + TNDQY  L          Y+   E SI FEVD
Sbjct: 876  IHTSHEKKKKINISYPNAVLNTMVKDHFTNDQYHELRKDRENNLPKYDVRDENSIFFEVD 935

Query: 904  GPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFL 963
            GPY AM+LPA+KEEG  +KKRYAVFN DG+LAELKGFE+KRRGEL+LIK FQ+ +F+ FL
Sbjct: 936  GPYLAMVLPAAKEEGKKLKKRYAVFNFDGSLAELKGFEVKRRGELQLIKNFQSSVFEAFL 995

Query: 964  HGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLADYGEQKSCAV 1023
             GST+EECY++VA VA+ WLD+L ++G ++ DSEL + ISE+ +MSK L +YG QKS ++
Sbjct: 996  AGSTLEECYASVAKVADYWLDVLYSRGSNLPDSELFELISENKSMSKKLEEYGAQKSTSI 1055

Query: 1024 TTARRLSDFLGDTMVKDKGLRCQYIVACEPQGTPVSERAVPVAIFETDAEIMKFYLRKWC 1083
            +TA+RL++FLG+ MVKD GL C+YI++ +P+G PV+ERA+P+AIF+++  + + +LR+W 
Sbjct: 1056 STAKRLAEFLGEQMVKDAGLACKYIISKKPEGAPVTERAIPLAIFQSEPSVRRHHLRRWL 1115

Query: 1084 K--TSSDVGIRSIVDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLYKKVREK 1141
            K  T  D  IR ++DW+YY +RL   IQKIITIPAA+Q ++NPVPRV HPDWL+KK+ EK
Sbjct: 1116 KDNTMGDADIRDVLDWNYYIERLGGTIQKIITIPAALQGLANPVPRVQHPDWLHKKMLEK 1175

Query: 1142 EDKFRQRKLVDIFSSLKKDDFLNKTCNAETNLMDENVEDLEDFPKKRRNSVNGPRPIVRC 1201
             D  +QR++ ++F+S  K   L           ++ + D+ED   K         PIV  
Sbjct: 1176 NDVLKQRRINEMFTSRPKPKPLATE--------EDKLADMEDLAGKDGGEGAAGCPIV-- 1225

Query: 1202 FEVNNEQKTVKTTDQVDSLRQQLEPSEVSDQQPSSQNAIDTENIDRIVDYKGWLELKKRK 1261
                 ++K V+  +  +   Q   P   + +Q         E    IV+   W+  +K+K
Sbjct: 1226 ----TKRKRVQLEENEEEEAQ---PQATTWRQALGAPPPIGETRKTIVE---WVRFQKKK 1275

Query: 1262 WKDNLDRRKKQKLGSLRASHQANGVSESLGDMINHKEAQRRTGVGSYFRRQETAMTRCHW 1321
            WK   D+R++ +  S R   +   V  + G           T +G + RR +  +    W
Sbjct: 1276 WKWQQDQRQRNRQASKRTRGEEPPVVRATGST---------TTLGGFLRRAQRTLLDQPW 1326

Query: 1322 QIIQLVPSSQSGVFLAWVVVEGIMVRIPITVPRLFYLN--SKDPIVEKFPGRRVNKTLPH 1379
            QI+QLVP    G F  W ++   + +I +TVPR+FY+N  S  P  E    R+VN+ LP 
Sbjct: 1327 QIVQLVPVDDLGHFTVWALIGEELHKIKLTVPRIFYVNQRSAAPPEEGQLWRKVNRVLPR 1386

Query: 1380 GRRSFNLIEVMIDEDQFRKESKKLAALLADPEVE 1413
             R  FNL    + E  FR  S  + A LA P++E
Sbjct: 1387 SRPVFNLYRYSVPEQLFRDNSLGMLADLATPDIE 1420



 Score =  265 bits (676), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 179/600 (29%), Positives = 287/600 (47%), Gaps = 117/600 (19%)

Query: 1442 LARYAHILWISDDGVPDLGGTSEEDECFADEVHQP---VLTYPGAYRKVSVELKIHHLSV 1498
            L R+  +LW S    PDLGG   +D     E  +    V    G Y  V VEL +  L+V
Sbjct: 1684 LQRHNFVLWWSASTRPDLGGREADDSRLLAEFEESISVVQNKAGFYPDVCVELALDSLAV 1743

Query: 1499 NALLKSNQVNEMEGGG-LFGFD-------QDMNSGPYNNELCGFDETTSSAPAFRVVKQL 1550
            +ALL+S ++ EMEG      FD       ++M        L  +DET   + AFRV++ +
Sbjct: 1744 SALLQSTRIQEMEGASSAITFDVMPQASLEEMIGTVPAATLPSYDETALCSAAFRVMRSM 1803

Query: 1551 IQRCLTDAVTSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEFRK 1610
            +   L +   + N+F+D  + H YRW+ S ++ L+DP L R L+ +M+K+F  ++AEF++
Sbjct: 1804 VNGWLREVSINRNIFSDFQIVHFYRWVRSSNALLYDPALRRSLNNLMRKMFLRIIAEFKR 1863

Query: 1611 LGATIIFANFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLFMD 1670
            LGATII+A+F+++I+ +GK  +S A  Y D ++++L+ +E+F  I+L     W+ +L+MD
Sbjct: 1864 LGATIIYADFNRIILSSGKKTVSDALGYVDYIVQSLRNKEMFHSIQLSFEQCWNFMLWMD 1923

Query: 1671 QYNYGGI----PARADESL----------------------------------------- 1685
            Q N+ GI    P   DE++                                         
Sbjct: 1924 QANFSGIRGKLPKGIDETVSSIVSTTMIRDSERNQDEEEDEEEDSENRDPVENNEVEQDA 1983

Query: 1686 DDDSQVDIVSSWNIAEYLP--KEIQDHFVLVVSEFMYIPWKHAQKLAASRASLQEGSSCT 1743
            D + ++ +  +W I E+LP   E ++ F  +++ FM       Q LA  + + Q      
Sbjct: 1984 DQEDELSLELNWTIGEHLPDENECREKFESLLTLFM-------QSLAEKKTTEQ------ 2030

Query: 1744 PSITVAAAENFESHIVQYVKGEISSYFTGKLLSIVRDAIHHMKKMNNDQHNSPGVMQTAA 1803
                  A ++       ++     +Y  GK                     SPG      
Sbjct: 2031 ------AIKDISHSAFDFILKLHKNYGKGK--------------------PSPG------ 2058

Query: 1804 NIHKVDAPLEFIKHVCAAFALDQNVQHDVLVMRKNLLKYVRVREFAPEAEFRDPCPSFIL 1863
                    LE I+ +  A ++D+ +   +  +R+N+L+ V + EF+  AE+ DPC S I+
Sbjct: 2059 --------LELIRTLIKALSVDKTLAEQINELRRNMLRLVGIGEFSDLAEWEDPCDSHII 2110

Query: 1864 PNVICSYCNDCRDLDLCRDMALLAQD----WHCAMPQCGQPYDREVMENALLQIVRQRER 1919
              VIC  CN CRDLDLC+D     +D    W CA  QC   YD E +E  +L  ++++  
Sbjct: 2111 NEVICKACNHCRDLDLCKDKHRAMKDGVPVWLCA--QCYVAYDNEEIEMRMLDALQRKMM 2168

Query: 1920 LYHLQDLVCIRCNQVKAAHLAEQCACAGSFRCKEDASDFRSKMQIFLNIANRQGFQLLQE 1979
             Y LQDL C RC+++K  +LAE C CAG+F       D ++ +  F  +A     QLLQ+
Sbjct: 2169 SYVLQDLRCARCSEIKRENLAEFCTCAGNFVPLISGKDIQTLLSTFNKVAGNHKMQLLQQ 2228


>gi|346426338|gb|AEO27699.1| DNApol-epsilon [Drosophila melanogaster]
          Length = 2236

 Score = 1361 bits (3522), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 697/1414 (49%), Positives = 950/1414 (67%), Gaps = 58/1414 (4%)

Query: 25   EELEAKLGYDLFSEGDKRLGWLLTFASSSLEDEDTRKVYSCIDLYFVSQDGSTFKSKYKF 84
            +++++K G+D   +  +R G+L+   S+ + DED R++ + +DL+F+  DGS FK    +
Sbjct: 40   DKIDSKYGFDRVKDSQERTGYLINMHSNEVLDED-RRLIAALDLFFIQMDGSRFKCTVAY 98

Query: 85   RPYFYAATKEKMEMDVEAYLRRRYESQIADIEILEKEDLDLKNHLSGLHKSYLKISFDTV 144
            +PY     ++ M ++V  +L R+Y  QI+ +E + KEDLDL NHLSGL + Y+K+SF   
Sbjct: 99   QPYLLIRPEDNMHLEVARFLGRKYSGQISGLEHITKEDLDLPNHLSGLQQQYIKLSFLNQ 158

Query: 145  QQLMDVKKDLLHVVERNQAKFDAAEAYESILTGKREQ------------RPQDFLDCIVD 192
              +  V+++L+  V+RNQ +  +   Y  +L     Q            R QD++DCIVD
Sbjct: 159  TAMTKVRRELMSAVKRNQERQKSNTYYMQMLATSLAQSSAGSEDATLGKRQQDYMDCIVD 218

Query: 193  LREYDVPYHIRFAIDNDVRCGQWYDVSISSTG--PLLEKRVDLLQRAEVHVCAFDIETTK 250
            +RE+DVPYH+R +ID  + CGQWY++   S    P +  R D+L R E  V AFDIETTK
Sbjct: 219  IREHDVPYHVRVSIDLRIFCGQWYNIRCRSGVELPTITCRPDILDRPEPVVLAFDIETTK 278

Query: 251  LPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNVNNE 310
            LPLKFPDA  D +MMISYM+DGQGYLI NRE +  +++D EYTPKPEFEG F V N  NE
Sbjct: 279  LPLKFPDAQTDQVMMISYMIDGQGYLITNREIISSNVDDFEYTPKPEFEGNFIVFNEENE 338

Query: 311  IELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDKNQGECRA 370
            ++LL+ +F H+ EV+P I VTYNGD+FDWPF+ETRAA +   M +E+GF   ++ G   +
Sbjct: 339  MQLLQRFFDHIMEVRPHIIVTYNGDFFDWPFVETRAAVYDLDMKQEIGFSKLRD-GNYLS 397

Query: 371  KFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQMMASYS 430
            + A H+DC  WVKRDSYLP GSQGLKAV KAKL YDP+E++PEDM R A E+PQ++A+YS
Sbjct: 398  RPAIHMDCLCWVKRDSYLPVGSQGLKAVAKAKLRYDPVELDPEDMCRMAVEQPQVLANYS 457

Query: 431  VSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVICPNK 490
            VSDAVATYYLYM YVHPFIF+L TIIPM PDE+LRKGSGTLCE LLMV+AY A ++ PNK
Sbjct: 458  VSDAVATYYLYMKYVHPFIFALNTIIPMEPDEILRKGSGTLCETLLMVEAYHAQIVYPNK 517

Query: 491  HQSDPEKFYR-NHLLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQLLNNLDRDLQ 549
            HQS+  K     H+L+SETY+GGHVE LESGVFR+D+P   +LDP+  +QL   +D  L+
Sbjct: 518  HQSELNKLSNEGHVLDSETYVGGHVEALESGVFRADIPCRLRLDPAMVKQLQEQVDAVLR 577

Query: 550  YAIKVEGKMDLESVSNYDEVKNAIMEKLLRLQEEPIREECPLIYHLDVAAMYPNIILTNR 609
            +AI+VE  + LE V N DEV+  I++ L  L + P R E P+IYHLDV AMYPNIILTNR
Sbjct: 578  HAIEVEEGIPLEKVLNLDEVRQEIVQGLQGLHDIPNRLEQPVIYHLDVGAMYPNIILTNR 637

Query: 610  LQPPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYYHLKKQIESE-FVDGT 668
            LQP ++V+D  C ACDFN+PG  C R ++W+WRGE+    R+++  +++Q+E+E F    
Sbjct: 638  LQPSAMVSDLDCAACDFNKPGVRCKRSMDWLWRGEMLPASRNEFQRIQQQLETEKFPPLF 697

Query: 669  NGHLSKSFLDLPKMEQQSRLKDRLKKYCQKAYKRV-LDKPVTELREAGICMRENSFYVDT 727
             G   ++F +L K +Q +  K RL  YC+KAYK+  L K   E R + IC +ENSFYVDT
Sbjct: 698  PGGPQRAFHELSKEDQAAYEKKRLTDYCRKAYKKTKLTK--LETRTSTICQKENSFYVDT 755

Query: 728  VRSFRDRRYEYKGLNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHKCILNSFYG 787
            VR+FRDRRYEYKGL KV K  ++ A ASG++ +I+ A+   VLYDSLQLAHKCILNSFYG
Sbjct: 756  VRAFRDRRYEYKGLTKVAKASVNAAVASGDAAEIKAAKGREVLYDSLQLAHKCILNSFYG 815

Query: 788  YVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLPGSFPENFT 847
            YVMR+GARW+SM MAG+V  TG+ II  AR +IE++G+PLELDTDGIWC+LPGSFP+ FT
Sbjct: 816  YVMRRGARWHSMPMAGIVCLTGSNIITKAREIIERVGRPLELDTDGIWCILPGSFPQEFT 875

Query: 848  FKTK-DLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKT---YETHSECSIEFEVD 903
              T  + KKK+ ISYP  +LN  V  + TNDQY  L          Y+   E SI FEVD
Sbjct: 876  IHTSHEKKKKINISYPNAVLNTMVKDHFTNDQYHELRKDKENNLPKYDIRDENSIFFEVD 935

Query: 904  GPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFL 963
            GPY AM+LPA+KEEG  +KKRYAVFN DGTLAELKGFE+KRRGEL+LIK FQ+ +F+ FL
Sbjct: 936  GPYLAMVLPAAKEEGKKLKKRYAVFNFDGTLAELKGFEVKRRGELQLIKNFQSSVFEAFL 995

Query: 964  HGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLADYGEQKSCAV 1023
             GST+EECY++VA VA+ WLD+L ++G ++ DSEL + ISE+ +MSK L +YG QKS ++
Sbjct: 996  AGSTLEECYASVAKVADYWLDVLYSRGSNLPDSELFELISENKSMSKKLEEYGAQKSTSI 1055

Query: 1024 TTARRLSDFLGDTMVKDKGLRCQYIVACEPQGTPVSERAVPVAIFETDAEIMKFYLRKWC 1083
            +TA+RL++FLG+ MVKD GL C+YI++ +P+G PV+ERA+P+AIF+++  + + +LR+W 
Sbjct: 1056 STAKRLAEFLGEQMVKDAGLACKYIISKKPEGAPVTERAIPLAIFQSEPSVRRHHLRRWL 1115

Query: 1084 K--TSSDVGIRSIVDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLYKKVREK 1141
            K  T  D  IR ++DW+YY +RL   IQKIITIPAA+Q ++NPVPRV HPDWL+KK+ EK
Sbjct: 1116 KDNTMGDADIRDVLDWNYYIERLGGTIQKIITIPAALQGLANPVPRVQHPDWLHKKMLEK 1175

Query: 1142 EDKFRQRKLVDIFSSLKKDDFLNKTCNAETNLMDENVEDLEDFPKKRRNSVNGPRPIVRC 1201
             D  +QR++ ++F+S  K   L           ++ + D+ED   K         PIV  
Sbjct: 1176 NDVLKQRRINEMFTSRPKPKPLATE--------EDKLADMEDLAGKDGGEGAAGCPIV-- 1225

Query: 1202 FEVNNEQKTVKTTDQVDSLRQQLEPSEVSDQQPSSQNAIDTENIDRIVDYKGWLELKKRK 1261
                 ++K ++  +  D   ++ +P   + +Q         E    IV+   W+  +K+K
Sbjct: 1226 ----TKRKRIQLEEHDD---EEAQPQATTWRQALGAPPPIGETRKTIVE---WVRFQKKK 1275

Query: 1262 WKDNLDRRKKQKLGSLRASHQANGVSESLGDMINHKEAQRRTGVGSYFRRQETAMTRCHW 1321
            WK   D+R++ +  S R   +   V  + G             +G + RR +  +    W
Sbjct: 1276 WKWQQDQRQRNRQASKRTRGEDPPVVRATGSTAT---------LGGFLRRAQRTLLDQPW 1326

Query: 1322 QIIQLVPSSQSGVFLAWVVVEGIMVRIPITVPRLFYLN--SKDPIVEKFPGRRVNKTLPH 1379
            QI+QLVP    G F  W ++   + +I +TVPR+FY+N  S  P  E    R+VN+ LP 
Sbjct: 1327 QIVQLVPVDDLGHFTVWALIGEELHKIKLTVPRIFYVNQRSAAPPEEGQLWRKVNRVLPR 1386

Query: 1380 GRRSFNLIEVMIDEDQFRKESKKLAALLADPEVE 1413
             R  FNL    + E  FR  S  + A LA P++E
Sbjct: 1387 SRPVFNLYRYSVPEQLFRDNSLGMLADLATPDIE 1420



 Score =  264 bits (675), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 177/560 (31%), Positives = 287/560 (51%), Gaps = 39/560 (6%)

Query: 1442 LARYAHILWISDDGVPDLGGTSEEDECFADEVHQP---VLTYPGAYRKVSVELKIHHLSV 1498
            L R+  +LW S    PDLGG   +D     E  +    V    G Y  V VEL +  L+V
Sbjct: 1684 LQRHNFVLWWSASTRPDLGGREADDSRLLAEFEESISVVQNKAGFYPDVCVELALDSLAV 1743

Query: 1499 NALLKSNQVNEMEGGG-LFGFD-------QDMNSGPYNNELCGFDETTSSAPAFRVVKQL 1550
            +ALL+S ++ EMEG      FD       ++M        L  +DET   + AFRV++ +
Sbjct: 1744 SALLQSTRIQEMEGASSAITFDVMPQVSLEEMIGTVPAATLPSYDETALCSAAFRVMRSM 1803

Query: 1551 IQRCLTDAVTSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEFRK 1610
            +   L +   + N+F+D  + H YRW+ S ++ L+DP L R L+ +M+K+F  ++AEF++
Sbjct: 1804 VNGWLREVSINRNIFSDFQIVHFYRWVRSSNALLYDPALRRSLNNLMRKMFLRIIAEFKR 1863

Query: 1611 LGATIIFANFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLFMD 1670
            LGATII+A+F+++I+ +GK  +S A  Y D ++++L+ +E+F  I+L     W+ +L+MD
Sbjct: 1864 LGATIIYADFNRIILSSGKKTVSDALGYVDYIVQSLRNKEMFHSIQLSFEQCWNFMLWMD 1923

Query: 1671 QYNYGGIPARADESLDDDSQVDIVSSWNIAEYLPKEIQDHFVLVVSEFMY-IPWKHAQKL 1729
            Q N+ GI  +  + + D++   IVS+  I +    +  D      SE    +    A++ 
Sbjct: 1924 QANFSGIRGKLPKGI-DETVSSIVSTTMIRDSERNQDDDEDEEEDSENRDPVESNEAEQD 1982

Query: 1730 AASRASLQEGSSCTPSIT--VAAAENFESHIVQYVKGEISSYFTGKLLSIVR----DAIH 1783
                 SL+   +    +       E FES +  +++       T + +  +     D I 
Sbjct: 1983 QEDELSLELNWTIGEHLPDENECREKFESLLTLFMQSLAEKKTTEQAIKDISHCAFDFIL 2042

Query: 1784 HMKKMNNDQHNSPGVMQTAANIHKVDAPLEFIKHVCAAFALDQNVQHDVLVMRKNLLKYV 1843
             + K       SPG              LE I+ +  A ++D+ +   +  +R+N+L+ V
Sbjct: 2043 KLHKNYGKGKPSPG--------------LELIRTLIKALSVDKTLAEQINELRRNMLRLV 2088

Query: 1844 RVREFAPEAEFRDPCPSFILPNVICSYCNDCRDLDLCRDMALLAQD----WHCAMPQCGQ 1899
             + EF+  AE+ DPC S I+  VIC  CN CRDLDLC+D     +D    W CA  QC  
Sbjct: 2089 GIGEFSDLAEWEDPCDSHIINEVICKACNHCRDLDLCKDKHRAMKDGVPVWLCA--QCYV 2146

Query: 1900 PYDREVMENALLQIVRQRERLYHLQDLVCIRCNQVKAAHLAEQCACAGSFRCKEDASDFR 1959
             YD E +E  +L  ++++   Y LQDL C RC+++K  +LAE C CAG+F       D +
Sbjct: 2147 AYDNEEIEMRMLDALQRKMMSYVLQDLRCSRCSEIKRENLAEFCTCAGNFVPLISGKDIQ 2206

Query: 1960 SKMQIFLNIANRQGFQLLQE 1979
            + +  F  +A     QLLQ+
Sbjct: 2207 TLLGTFNKVAANHKMQLLQQ 2226


>gi|325089007|gb|EGC42317.1| DNA polymerase epsilon catalytic subunit A [Ajellomyces capsulatus
            H88]
          Length = 2232

 Score = 1360 bits (3521), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 704/1433 (49%), Positives = 957/1433 (66%), Gaps = 93/1433 (6%)

Query: 15   KKQKLIRSAEEELEAKLGYDLFSEGDKRLGWLLTFASSSLEDEDTRKVYSCIDLYFVSQD 74
            +K + +R A    EA +G+  F  G  R GWL+   S+ +ED       + ++ YF+  +
Sbjct: 43   EKYQAVRLANSIDEA-MGFPRFEAGKPRTGWLINMHSTIIEDPKVPGGRAGVEYYFLDDN 101

Query: 75   GSTFKSKYKFRPYFYAATKEKMEMDVEAYLRRRYESQIADIEILEKEDLDLKNHLSGLHK 134
            G++FK+  ++ PYF  ATK   E +VE + +R +E  +  ++ +EKEDL + NHL G  +
Sbjct: 102  GTSFKAIVEYDPYFLIATKRGHEGEVEEWCKRMFEGMVKSVKQVEKEDLQMPNHLLGHKR 161

Query: 135  SYLKISFDTVQQLMDVKKDLLHVVERNQAKFDAAEAYESILTG---------KREQRPQD 185
             +L++SF  V  L+ V+K +L + ++N+   +A + Y  + +          +   RPQ 
Sbjct: 162  RFLQLSFANVGDLLGVRKSILPIAQKNKKNVNAMDTYAEMASSNVGFDLFDEEVNDRPQK 221

Query: 186  -FLDC---IVDLREYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLLEKRVDLLQRAEVHV 241
             F+D    +VD+REYDVPYH+R +ID D+R G+WY V   +    L    D L+RA+  V
Sbjct: 222  AFIDASEYVVDIREYDVPYHVRVSIDKDIRIGKWYSVQSKNGVISLSCIEDRLKRADPVV 281

Query: 242  CAFDIETTKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGY 301
             A+DIETTKLPLKFPD   D IMMISYM+DGQG+LI NRE V EDI D EYTPKPE++G 
Sbjct: 282  LAYDIETTKLPLKFPDPVIDQIMMISYMIDGQGFLITNREIVSEDIADFEYTPKPEYDGP 341

Query: 302  FKVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQC 361
            F + N  +E  ++  +FAH++E KP +  TYNGD+FDW F+E RA+  G  M  E+GF+ 
Sbjct: 342  FTIFNEPDEKRVIERFFAHIKEAKPTVIATYNGDFFDWAFVEARASVQGIDMYAEIGFR- 400

Query: 362  DKNQGEC-RAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAK 420
             KN  +  ++ +  H+DCFAWV RDSYLPQGS+GLKAVT AKLGYDP E++PE M R+A 
Sbjct: 401  -KNSEDIYQSNYCVHMDCFAWVNRDSYLPQGSRGLKAVTVAKLGYDPDELDPEVMTRYAS 459

Query: 421  EKPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQA 480
            E+PQ +A YSVSDAVATYYLYM Y+HPFIFSL TIIP++PD+VLRKG+GTLCEMLLMVQA
Sbjct: 460  ERPQTLAEYSVSDAVATYYLYMKYIHPFIFSLCTIIPLNPDDVLRKGTGTLCEMLLMVQA 519

Query: 481  YKANVICPNKHQSDPEKFYRNHLLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQL 540
            Y+ N+I PNKH   PE F+  HLL+S+TY+GGHVE +E+GVFRSD+P +F +DP+A ++L
Sbjct: 520  YRGNIILPNKHTEPPEAFWNGHLLDSQTYVGGHVESIEAGVFRSDIPVNFTVDPAAIDEL 579

Query: 541  LNNLDRDLQYAIKVEGKMDLESVSNYDEVKNAIMEKLLRLQEEPIREECPLIYHLDVAAM 600
            L++LD  L+++I VE K  L+ V+NYD+VK  I +KLL L+E P R E P IYHLDVA+M
Sbjct: 580  LHDLDAALKFSIVVEEKKALDDVTNYDKVKAQIAKKLLNLKETPNRNERPSIYHLDVASM 639

Query: 601  YPNIILTNRLQPPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYYHLKKQI 660
            YPNI+ TNRLQP S++ +  C  CDFNRPGKTC R++ W WRGE    KR +Y  +++ +
Sbjct: 640  YPNIMTTNRLQPDSMIQESDCAVCDFNRPGKTCDRRMPWSWRGEYIPAKRDEYNMIRRAV 699

Query: 661  ESE-FVDGTNGHLSKSFLDLPKMEQQSRLKDRLKKYCQKAYKRVLDKPVTELREAGICMR 719
             +E F   T     ++F +L   EQ + +K RL+ Y +K Y R+ +    + REA IC R
Sbjct: 700  ANEKFPGKTKKSPMRAFEELSTSEQATIVKKRLQDYSKKIYHRIYESKTVQ-REAIICQR 758

Query: 720  ENSFYVDTVRSFRDRRYEYKGLNKVWKGKLSEAKASGN-SIKIQEAQDMVVLYDSLQLAH 778
            EN FYVDTVRSFRDRRY++KG  KVWKGK    KA+G  +++I+EA+ M++L+DSLQLAH
Sbjct: 759  ENPFYVDTVRSFRDRRYDFKGQQKVWKGKTDSLKAAGAPAVEIEEAKKMIILFDSLQLAH 818

Query: 779  KCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVL 838
            K ILNSFYGYVMRKG+RWYSMEMAGV   TGA IIQ AR L+E+IG+PLELDTDGIWC+L
Sbjct: 819  KVILNSFYGYVMRKGSRWYSMEMAGVTCLTGAHIIQMARELVERIGRPLELDTDGIWCML 878

Query: 839  PGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSI 898
            PG+FPENF F  K+  KKL ISYPCVMLN  V    TN QYQTLVDP +  YETHS+ SI
Sbjct: 879  PGTFPENFAFTLKN-GKKLPISYPCVMLNHLVHGRFTNHQYQTLVDPKTFRYETHSDNSI 937

Query: 899  EFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAEL 958
             FEVDGPY+AMILP SKEE   +KKRYAVFN DG+LAELKGFE+KRRGELKLIK+FQ ++
Sbjct: 938  FFEVDGPYRAMILPTSKEEDKNLKKRYAVFNHDGSLAELKGFEVKRRGELKLIKIFQTQI 997

Query: 959  FDKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLADYGEQ 1018
            F  FL G+T+ E Y+AVA VANRWLD+L   G  +AD ELID I E+ +MSK+L +YG Q
Sbjct: 998  FKFFLEGTTLTETYAAVAEVANRWLDVLHMHGTTLADEELIDLICENRSMSKTLEEYGNQ 1057

Query: 1019 KSCAVTTARRLSDFLGDTMVKDKGLRCQYIVACEPQGTPVSERAVPVAIFETDAEIMKFY 1078
            KS ++TTA+RL++FLGD MVKDKGL C+YI++ +P+ +P+++RA+PVAIF  +  + +F+
Sbjct: 1058 KSTSITTAKRLAEFLGDQMVKDKGLNCKYIISSKPRTSPITDRAIPVAIFSAEYSVKRFF 1117

Query: 1079 LRKWCK-TSSDVGIRSIVDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLYKK 1137
            LRKW K    D+  R+I+DW YY +RL S +QK+ITIPAA+QK+ NPVPRV HP+WL ++
Sbjct: 1118 LRKWLKDDPGDMDPRTIIDWDYYLERLGSVVQKLITIPAALQKIRNPVPRVPHPEWLQRR 1177

Query: 1138 VREKEDKFRQRKLVDIFSSLKKDDFLNKTCNAETNLMDENVE---DLEDF-----PKKRR 1189
            +  K+DKF+Q+K+ ++F      D         TN+MD  +    D+ED       K R 
Sbjct: 1178 INIKDDKFKQKKMTELFEKTPLSDL-------PTNIMDHRLPASGDIEDMVSQSTQKHRY 1230

Query: 1190 NSVNGPRPIVRCFEVNNEQKTVKTTDQVDSLRQQLEPSEVSDQQPSSQNAIDTENIDRIV 1249
            N VN               K  +    +++   QL+P       P++  +I TE      
Sbjct: 1231 NIVN---------------KGAQKRKVLENSASQLDPFA---SLPATMPSI-TE------ 1265

Query: 1250 DYKGWLELKKRKWKDNLDRR-KKQKLGSLRASHQANGVSESLGDMINHKEAQRRTGVGSY 1308
            DY+ WL+ +K+KWK     R +++KL   R S   N                    +G++
Sbjct: 1266 DYESWLKYQKQKWKIQKQARIRRRKLFGERTSTTTN-------------------VIGNF 1306

Query: 1309 FRRQETAMTRCHWQIIQLVPSSQSGVFLAWVVVEGIMVRIPITVPRLFYLNSKDPIVEKF 1368
            FR Q   +    WQI+QL  +   G    +V+++  +  + + VPR  ++N K    E  
Sbjct: 1307 FRNQAELVYVKTWQILQLKETDIPGEVRMFVLIDHKIHALTVKVPRHIFINLKH---EDL 1363

Query: 1369 PG--------RRVNKTLPHGRRSFNLIEVMIDEDQFRKESKKLAALLADPEVE 1413
            P         ++VN +LP+G  S +L ++++ ED + KE+ K++ LL  P VE
Sbjct: 1364 PDVNLVDCSVQKVNHSLPNGHPSVHLFKLIMPEDTYLKEADKISILLNHPSVE 1416



 Score =  236 bits (601), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 173/635 (27%), Positives = 298/635 (46%), Gaps = 73/635 (11%)

Query: 1408 ADPEVEVLGWQQNAAKIGMQRCAASSQWFNERISLARYAHI------------------- 1448
            +D ++  LGWQ   AK       A   W      LARY  +                   
Sbjct: 1613 SDNDLPPLGWQPFVAKQITMHYLALGSWLYHLGELARYGDVPICNLEKDDPKYLIDIAYA 1672

Query: 1449 ---------LWISDDGVPDLGGTSEEDECFA--DEVHQPVLTYPGAYRKVSVELKIHHLS 1497
                     LW S   +PD  G  E+D+      +V  P    PGAY  V +EL+I +L+
Sbjct: 1673 RRLEQNNIVLWWSPSPLPDHAGY-EKDDILGPMQKVDMPSSNNPGAYSSVCIELEIRNLA 1731

Query: 1498 VNALLKSNQVNEMEGG--GLFGFDQDMNSGPYNNELCGFDETTSSAPAFRVVKQLIQRCL 1555
            +N +L S+ +NE+EG    L        +G  +     + +T  ++    V++ L++   
Sbjct: 1732 INTILTSSLINELEGSESTLLNPVAPNETGASDGTGVLYSDTAFASAGILVLRDLVKSWW 1791

Query: 1556 TDAVTSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEFRKLGATI 1615
             +A   GN  AD ++QHL RW+ S  S L+D  LH  +  + +K F  L+ +FR++G+ I
Sbjct: 1792 AEAC-QGNGMADIMVQHLIRWVESSDSFLYDRSLHYHVQMMSKKAFQQLMTDFRRVGSQI 1850

Query: 1616 IFANFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLFMDQYNYG 1675
            IFA+ S++++ T K +++ A AY   ++K+++ + LF +++LE   +W  L++ D++N+G
Sbjct: 1851 IFASPSRLLLQTTKGEVANAYAYSQYIVKSIKEKPLFHFLDLEIKEYWDYLVWYDEFNFG 1910

Query: 1676 GIPARADESLDDDSQ-VDIVSSWNIAEYLPKEIQDHFVLVVSEFMYIPWKHAQKLAASRA 1734
            G      E ++ ++Q ++ V  W ++++LP  +Q  F+  V E  YI   H  K    R 
Sbjct: 1911 G--KGCQEVVEAENQELETVMHWQLSKFLPTPLQTVFLDWVVE--YIELMHGLK----RP 1962

Query: 1735 SLQEGSSCTPSITVAAAENFESHIVQYVKGEISSYFTGKLLSIVRDAIHHMKKMNNDQ-- 1792
            ++    +  P  T      F+S I     GE++S  T      ++  I  + +   D+  
Sbjct: 1963 TIDNEGADPPRATQLP---FQS-ITDSDSGEMTSILTESFSKPLKRQIAGLIRRQRDELL 2018

Query: 1793 ----------HNSPGVMQTAANIHKVDAPLEFIKHVCAAFALDQNVQHDVLVMRKNLLKY 1842
                         PG    A+  H+ +  LE +K +    +L +    +  ++R+ LL  
Sbjct: 2019 HPELASDYVFPTIPGASWRASK-HERNPTLELVKSLMQVLSLCKTTTLETRLLRRELLAL 2077

Query: 1843 VRVREFAPEAEFRDPCPSFILPNVICSYCNDCRDLDLCRDMALLAQD-----------WH 1891
              V+EF+ E  F +P  S   P +IC++C   RDLD+CRD  LL ++           W 
Sbjct: 2078 FEVKEFSDEGRFENPSGSLKFPQLICNHCTMTRDLDICRDGDLLPENSADNIAAGSKPWC 2137

Query: 1892 CAMPQCGQPYDREVMENALLQIVRQRERLYHLQDLVCIRCNQVKAAHLAEQCACAGSFRC 1951
            C    C   YDR  +E  L+  V+     +  QDL C +C  ++ +   E C+C+GS+  
Sbjct: 2138 CL--SCATEYDRLALEERLIGQVQGLVVEWQTQDLKCSKCKSLRVSEFMEHCSCSGSWIA 2195

Query: 1952 KEDASDFRSKMQIFLNIANRQGFQLLQECTSWILE 1986
              D S    K+ +F ++A   G ++L   T+ +LE
Sbjct: 2196 TVDLSGIEKKLNLFKSVAKFYGLKMLTTVTNGVLE 2230


>gi|225560717|gb|EEH08998.1| DNA polymerase epsilon catalytic subunit A [Ajellomyces capsulatus
            G186AR]
          Length = 2232

 Score = 1360 bits (3520), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 705/1433 (49%), Positives = 958/1433 (66%), Gaps = 93/1433 (6%)

Query: 15   KKQKLIRSAEEELEAKLGYDLFSEGDKRLGWLLTFASSSLEDEDTRKVYSCIDLYFVSQD 74
            +K + +R A    EA +G+  F  G  R GWL+   S+ +ED       + ++ YF+  +
Sbjct: 43   EKYQAVRLANSIDEA-MGFPRFEAGKPRTGWLINMHSTIIEDPKVPGGRAGVEYYFLDDN 101

Query: 75   GSTFKSKYKFRPYFYAATKEKMEMDVEAYLRRRYESQIADIEILEKEDLDLKNHLSGLHK 134
            G++FK+  ++ PYF  ATK   E +VE + +R +E  +  ++ +EKEDL + NHL G  +
Sbjct: 102  GTSFKAIVEYDPYFLIATKRGHEGEVEEWCKRMFEGMVKSVKQVEKEDLQMPNHLLGHKR 161

Query: 135  SYLKISFDTVQQLMDVKKDLLHVVERNQAKFDAAEAYESILTG---------KREQRPQD 185
             +L++SF  V  L+ V+K +L + ++N+   +A + Y  + +          +   RPQ 
Sbjct: 162  RFLQLSFANVGDLLGVRKSILPIAQKNKKNVNAMDTYAEMASSNVGFDLFDEEVNDRPQK 221

Query: 186  -FLDC---IVDLREYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLLEKRVDLLQRAEVHV 241
             F+D    IVD+REYDVPYH+R +ID D+R G+WY V   +    L    D L+RA+  V
Sbjct: 222  AFIDASEYIVDIREYDVPYHVRVSIDKDIRIGKWYSVQSKNGVISLSCIEDRLKRADPVV 281

Query: 242  CAFDIETTKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGY 301
             A+DIETTKLPLKFPD   D IMMISYM+DGQG+LI NRE V EDI D EYTPKPE++G 
Sbjct: 282  LAYDIETTKLPLKFPDPVIDQIMMISYMIDGQGFLITNREIVSEDIADFEYTPKPEYDGP 341

Query: 302  FKVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQC 361
            F + N  +E +++  +FAH++E KP +  TYNGD+FDW F+E RA+  G  M  E+GF+ 
Sbjct: 342  FTIFNEPDEKKVIERFFAHIKEAKPTVIATYNGDFFDWAFVEARASVQGIDMYAEIGFR- 400

Query: 362  DKNQGEC-RAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAK 420
             KN  +  ++ +  H+DCFAWV RDSYLPQGS+GLKAVT AKLGYDP E++PE M R+A 
Sbjct: 401  -KNSEDIYQSNYCVHMDCFAWVNRDSYLPQGSRGLKAVTVAKLGYDPDELDPEVMTRYAS 459

Query: 421  EKPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQA 480
            E+PQ +A YSVSDAVATYYLYM Y+HPFIFSL TIIP++PD+VLRKG+GTLCEMLLMVQA
Sbjct: 460  ERPQTLAEYSVSDAVATYYLYMKYIHPFIFSLCTIIPLNPDDVLRKGTGTLCEMLLMVQA 519

Query: 481  YKANVICPNKHQSDPEKFYRNHLLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQL 540
            Y+ N+I PNKH   PE F+  HLL+S+TY+GGHVE +E+GVFRSD+P +F +DP+A ++L
Sbjct: 520  YRGNIILPNKHTEPPEAFWNGHLLDSQTYVGGHVESIEAGVFRSDIPVNFTVDPAAIDEL 579

Query: 541  LNNLDRDLQYAIKVEGKMDLESVSNYDEVKNAIMEKLLRLQEEPIREECPLIYHLDVAAM 600
            L++LD  L+++I VE K  L+ V+NYD+VK  I +KLL L+E P R E P IYHLDVA+M
Sbjct: 580  LHDLDAALKFSIVVEEKKALDDVTNYDKVKAQIAKKLLNLKETPNRNERPSIYHLDVASM 639

Query: 601  YPNIILTNRLQPPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYYHLKKQI 660
            YPNI+ TNRLQP S++ +  C  CDFNRPGKTC R++ W WRGE    KR +Y  +++ +
Sbjct: 640  YPNIMTTNRLQPDSMIQESDCAVCDFNRPGKTCDRRMPWSWRGEYIPAKRDEYNMIRRAV 699

Query: 661  ESE-FVDGTNGHLSKSFLDLPKMEQQSRLKDRLKKYCQKAYKRVLDKPVTELREAGICMR 719
             +E F   T     ++F +L   EQ + +K RL+ Y +K Y R+ +    + REA IC R
Sbjct: 700  ANEKFPGKTKKSPMRAFEELSTSEQATIVKKRLQDYSKKIYHRIYESKTVQ-REAIICQR 758

Query: 720  ENSFYVDTVRSFRDRRYEYKGLNKVWKGKLSEAKASGN-SIKIQEAQDMVVLYDSLQLAH 778
            EN FYVDTVRSFRDRRY++KG  KVWKGK    KA+G  +++I+EA+ M++L+DSLQLAH
Sbjct: 759  ENPFYVDTVRSFRDRRYDFKGQQKVWKGKTDSLKAAGAPAVEIEEAKKMIILFDSLQLAH 818

Query: 779  KCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVL 838
            K ILNSFYGYVMRKG+RWYSMEMAGV   TGA IIQ AR L+E+IG+PLELDTDGIWC+L
Sbjct: 819  KVILNSFYGYVMRKGSRWYSMEMAGVTCLTGAHIIQMARELVERIGRPLELDTDGIWCML 878

Query: 839  PGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSI 898
            PG+FPENF F  K+  KKL ISYPCVMLN  V    TN QYQTLVDP +  YETHS+ SI
Sbjct: 879  PGTFPENFAFTLKN-GKKLPISYPCVMLNHLVHGRFTNHQYQTLVDPKTFRYETHSDNSI 937

Query: 899  EFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAEL 958
             FEVDGPY+AMILP SKEE   +KKRYAVFN DG+LAELKGFE+KRRGELKLIK+FQ ++
Sbjct: 938  FFEVDGPYRAMILPTSKEEDKNLKKRYAVFNHDGSLAELKGFEVKRRGELKLIKIFQTQI 997

Query: 959  FDKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLADYGEQ 1018
            F  FL G+T+ E Y+AVA VANRWLD+L   G  +AD ELID I E+ +MSK+L +YG Q
Sbjct: 998  FKFFLEGTTLTETYAAVAEVANRWLDVLHMHGTTLADEELIDLICENRSMSKTLEEYGNQ 1057

Query: 1019 KSCAVTTARRLSDFLGDTMVKDKGLRCQYIVACEPQGTPVSERAVPVAIFETDAEIMKFY 1078
            KS ++TTA+RL++FLGD MVKDKGL C+YI++ +P+ +P+++RA+PVAIF  +  + +F+
Sbjct: 1058 KSTSITTAKRLAEFLGDQMVKDKGLNCKYIISSKPRTSPITDRAIPVAIFSAEYSVKRFF 1117

Query: 1079 LRKWCK-TSSDVGIRSIVDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLYKK 1137
            LRKW K    D+  R+I+DW YY +RL S +QK+ITIPAA+QK+ NPVPRV HP+WL ++
Sbjct: 1118 LRKWLKDDPGDMDPRTIIDWDYYLERLGSVVQKLITIPAALQKIRNPVPRVPHPEWLQRR 1177

Query: 1138 VREKEDKFRQRKLVDIFSSLKKDDFLNKTCNAETNLMDENVE---DLEDF-----PKKRR 1189
            +  K+DKF+Q+K+ ++F      D         TN+MD  +    D+ED       K R 
Sbjct: 1178 INIKDDKFKQKKMTELFEKTPLSDL-------PTNIMDHRLPASGDIEDMVSQSTQKHRY 1230

Query: 1190 NSVNGPRPIVRCFEVNNEQKTVKTTDQVDSLRQQLEPSEVSDQQPSSQNAIDTENIDRIV 1249
            N VN               K  +    +++   QL+P       P++  +I TE      
Sbjct: 1231 NIVN---------------KGAQKRKVLENSTSQLDPFA---SLPATIPSI-TE------ 1265

Query: 1250 DYKGWLELKKRKWKDNLDRR-KKQKLGSLRASHQANGVSESLGDMINHKEAQRRTGVGSY 1308
            DY+ WL+ +K+KWK     R +++KL   R S   N                    +G++
Sbjct: 1266 DYESWLKYQKQKWKIQKQARIRRRKLFGERTSTTTN-------------------VIGNF 1306

Query: 1309 FRRQETAMTRCHWQIIQLVPSSQSGVFLAWVVVEGIMVRIPITVPRLFYLNSKDPIVEKF 1368
            FR Q   +    WQI+QL  +   G    +V+++  +  + + VPR  ++N K    E  
Sbjct: 1307 FRNQAELVYVKTWQILQLKETDIPGEVRMFVLIDHKIHALTVKVPRHIFINLKH---EDL 1363

Query: 1369 PG--------RRVNKTLPHGRRSFNLIEVMIDEDQFRKESKKLAALLADPEVE 1413
            P         ++VN +LP+G  S +L ++++ ED + KE+ K++ LL  P VE
Sbjct: 1364 PDVNLVDCSVQKVNHSLPNGHPSVHLFKLIMPEDTYLKEADKISILLNHPSVE 1416



 Score =  236 bits (601), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 172/634 (27%), Positives = 298/634 (47%), Gaps = 71/634 (11%)

Query: 1408 ADPEVEVLGWQQNAAKIGMQRCAASSQWFNERISLARYAHI------------------- 1448
            +D ++  LGWQ   AK       A   W      LARY  +                   
Sbjct: 1613 SDNDLPPLGWQPFVAKQITMHYLALGSWLYHLGELARYGDVPICNLEKDDPKYLIDIAYA 1672

Query: 1449 ---------LWISDDGVPDLGGTSEEDECFA--DEVHQPVLTYPGAYRKVSVELKIHHLS 1497
                     LW S   +PD  G  E+D+      +V  P    PGAY  V +EL+I +L+
Sbjct: 1673 RRLEQNNIVLWWSPSPLPDHAGY-EKDDILGPMQKVDMPSSNNPGAYSSVCIELEIRNLA 1731

Query: 1498 VNALLKSNQVNEMEGG--GLFGFDQDMNSGPYNNELCGFDETTSSAPAFRVVKQLIQRCL 1555
            +N +L S+ +NE+EG    L        +G  +     + +T  ++    V++ L++   
Sbjct: 1732 INTILTSSLINELEGSESTLLNPVAPNETGASDGTGVLYSDTAFASAGILVLRDLVKSWW 1791

Query: 1556 TDAVTSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEFRKLGATI 1615
             +A   GN  AD ++QHL RW+ S  S L+D  LH  +  + +K F  L+ +FR++G+ I
Sbjct: 1792 AEAC-QGNGMADIMVQHLIRWVESSDSFLYDRSLHYHVQMMSKKAFQQLMTDFRRVGSQI 1850

Query: 1616 IFANFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLFMDQYNYG 1675
            IFA+ S++++ T K +++ A AY   ++K+++ + LF +++LE   +W  L++ D++N+G
Sbjct: 1851 IFASPSRLLLQTTKGEVANAYAYSQYIVKSIKEKPLFHFLDLEIKEYWDYLVWYDEFNFG 1910

Query: 1676 GIPARADESLDDDSQ-VDIVSSWNIAEYLPKEIQDHFVLVVSEFMYIPWKHAQKLAASRA 1734
            G      E ++ ++Q ++ V  W ++++LP  +Q  F+  V E  YI   H  K    R 
Sbjct: 1911 G--KGCQEVVEAENQELETVMHWQLSKFLPTPLQTVFLDWVVE--YIELMHGLK----RP 1962

Query: 1735 SLQEGSSCTPSITVAAAENFESHIVQYVKGEISSYFTGKLLSIVRDAIHHMKKMNNDQHN 1794
            ++    +  P  T      F+S I     GE++S  T      ++  I  + +   D+  
Sbjct: 1963 TIDNEGADPPRATQLP---FQS-ITDSDSGEMTSILTESFSKPLKRQIAGLIRRQRDELL 2018

Query: 1795 SPGVMQT-----------AANIHKVDAPLEFIKHVCAAFALDQNVQHDVLVMRKNLLKYV 1843
             P +               A+ H+ +  LE +K +    +L +    +  ++R+ LL   
Sbjct: 2019 HPELASDYVFPTLPGASWRASKHERNPTLELVKSLMQVLSLCKTTTLETRLLRRELLALF 2078

Query: 1844 RVREFAPEAEFRDPCPSFILPNVICSYCNDCRDLDLCRDMALLAQD-----------WHC 1892
             V+EF+ E  F +P  S   P +IC++C   RDLD+CRD  LL ++           W C
Sbjct: 2079 EVKEFSDEGRFENPSGSLKFPQLICNHCTMTRDLDICRDGDLLPENSADNITAGSKPWCC 2138

Query: 1893 AMPQCGQPYDREVMENALLQIVRQRERLYHLQDLVCIRCNQVKAAHLAEQCACAGSFRCK 1952
                C   YDR  +E  L+  V+     +  QDL C +C  ++ +   E C+C+GS+   
Sbjct: 2139 L--SCATEYDRLALEERLIGQVQGLVVEWQTQDLKCSKCKSLRVSEFMEHCSCSGSWIAT 2196

Query: 1953 EDASDFRSKMQIFLNIANRQGFQLLQECTSWILE 1986
             D S    K+ +F ++A   G ++L   T+ +LE
Sbjct: 2197 VDLSGIEKKLNLFKSVAEFYGLKMLTTVTNGVLE 2230


>gi|195331287|ref|XP_002032334.1| GM26499 [Drosophila sechellia]
 gi|194121277|gb|EDW43320.1| GM26499 [Drosophila sechellia]
          Length = 1550

 Score = 1360 bits (3520), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 698/1414 (49%), Positives = 951/1414 (67%), Gaps = 58/1414 (4%)

Query: 25   EELEAKLGYDLFSEGDKRLGWLLTFASSSLEDEDTRKVYSCIDLYFVSQDGSTFKSKYKF 84
            +++++K G+D   +  +R G+L+   S+ + DED R++ + +DL+F+  DGS FK    +
Sbjct: 40   DKIDSKYGFDRVKDSQERTGYLINMHSNEVLDED-RRLIAALDLFFIQMDGSRFKCTVAY 98

Query: 85   RPYFYAATKEKMEMDVEAYLRRRYESQIADIEILEKEDLDLKNHLSGLHKSYLKISFDTV 144
            +PY     ++ M ++V  +L R+Y  QI+ +E + KEDLDL NHLSGL + Y+K+SF   
Sbjct: 99   QPYLLIRPEDNMHLEVARFLGRKYSGQISALEHITKEDLDLPNHLSGLQQQYIKLSFLNQ 158

Query: 145  QQLMDVKKDLLHVVERNQAKFDAAEAYESILTGKREQ------------RPQDFLDCIVD 192
              +  V+++L+  V+RNQ +  +   Y  +L     Q            R QD++DCIVD
Sbjct: 159  TAMTKVRRELMSAVKRNQERQKSNTYYMQMLATSLAQSSAGSEDATLGKRQQDYMDCIVD 218

Query: 193  LREYDVPYHIRFAIDNDVRCGQWYDVSISST--GPLLEKRVDLLQRAEVHVCAFDIETTK 250
            +RE+DVPYH+R +ID  + CGQWY++   S    P +  R D+L R E  V AFDIETTK
Sbjct: 219  IREHDVPYHVRVSIDLRIFCGQWYNIRCRSGVEMPSITCRPDILDRPEPVVLAFDIETTK 278

Query: 251  LPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNVNNE 310
            LPLKFPDA  D +MMISYM+DGQGYLI NRE +  +++D EYTPKPEFEG F V N  NE
Sbjct: 279  LPLKFPDAQTDQVMMISYMIDGQGYLITNREIISSNVDDFEYTPKPEFEGNFIVFNEENE 338

Query: 311  IELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDKNQGECRA 370
            ++LL+ +F H+ EV+P I VTYNGD+FDWPF+ETRAA +   M +E+GF   ++ G   +
Sbjct: 339  MQLLQRFFDHIMEVRPHIIVTYNGDFFDWPFVETRAAAYDLDMKQEIGFSKLRD-GNYLS 397

Query: 371  KFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQMMASYS 430
            + A H+DC  WVKRDSYLP GSQGLKAV KAKL YDP+E++PEDM R A E+PQ++A+YS
Sbjct: 398  RPAIHMDCLCWVKRDSYLPVGSQGLKAVAKAKLRYDPVELDPEDMCRMAVEQPQVLANYS 457

Query: 431  VSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVICPNK 490
            VSDAVATYYLYM YVHPFIF+L TIIPM PDE+LRKGSGTLCE LLMV+AY A ++ PNK
Sbjct: 458  VSDAVATYYLYMKYVHPFIFALNTIIPMEPDEILRKGSGTLCETLLMVEAYHAQIVYPNK 517

Query: 491  HQSDPEKFY-RNHLLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQLLNNLDRDLQ 549
            HQS+  K     H+L+SETY+GGHVE LESGVFR+D+P  F+LDP+  +QL   +D  L+
Sbjct: 518  HQSELNKLSNEGHVLDSETYVGGHVEALESGVFRADIPCRFRLDPAMVKQLQEQVDAVLR 577

Query: 550  YAIKVEGKMDLESVSNYDEVKNAIMEKLLRLQEEPIREECPLIYHLDVAAMYPNIILTNR 609
            +AI+VE  + LE V N DEV+  I++ L  L + P R E P+IYHLDV AMYPNIILTNR
Sbjct: 578  HAIEVEEGIPLEKVLNLDEVRQEIVQGLQGLHDIPNRLEQPVIYHLDVGAMYPNIILTNR 637

Query: 610  LQPPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYYHLKKQIESE-FVDGT 668
            LQP ++V+D  C ACDFN+PG  C R ++W+WRGE+    R+++  +++Q+E+E F    
Sbjct: 638  LQPSAMVSDLDCAACDFNKPGVRCKRSMDWLWRGEMLPASRNEFQRIQQQLETEKFPPLF 697

Query: 669  NGHLSKSFLDLPKMEQQSRLKDRLKKYCQKAYKRV-LDKPVTELREAGICMRENSFYVDT 727
             G   ++F +L K +Q +  K RL  YC+KAYK+  L K   E R + IC +ENSFYVDT
Sbjct: 698  PGGPQRAFHELSKEDQAAYEKKRLTDYCRKAYKKTKLTK--LETRTSTICQKENSFYVDT 755

Query: 728  VRSFRDRRYEYKGLNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHKCILNSFYG 787
            VR+FRDRRYEYKGL KV K  ++ A ASG++ +I+ A+   VLYDSLQLAHKCILNSFYG
Sbjct: 756  VRAFRDRRYEYKGLTKVAKASVNAAVASGDAAEIKAAKGREVLYDSLQLAHKCILNSFYG 815

Query: 788  YVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLPGSFPENFT 847
            YVMR+GARW+SM MAG+V  TG+ II  AR +IE++G+PLELDTDGIWC+LPGSFP+ FT
Sbjct: 816  YVMRRGARWHSMPMAGIVCLTGSNIITKAREIIERVGRPLELDTDGIWCILPGSFPQEFT 875

Query: 848  FKTK-DLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKT---YETHSECSIEFEVD 903
              T  + KKK+ ISYP  +LN  V  + TNDQY  L          Y+   E SI FEVD
Sbjct: 876  IHTSHEKKKKINISYPNAVLNTMVKDHFTNDQYHELRKDKENNLPMYDIRDENSIFFEVD 935

Query: 904  GPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFL 963
            GPY AM+LPA+KEEG  +KKRYAVFN DG+LAELKGFE+KRRGEL+LIK FQ+ +F+ FL
Sbjct: 936  GPYLAMVLPAAKEEGKKLKKRYAVFNFDGSLAELKGFEVKRRGELQLIKNFQSSVFEAFL 995

Query: 964  HGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLADYGEQKSCAV 1023
             GST+EECY++VA VA+ WLD+L ++G ++ DSEL + ISE+ +MSK L +YG QKS ++
Sbjct: 996  AGSTLEECYASVAKVADYWLDVLYSRGSNLPDSELFELISENKSMSKKLEEYGAQKSTSI 1055

Query: 1024 TTARRLSDFLGDTMVKDKGLRCQYIVACEPQGTPVSERAVPVAIFETDAEIMKFYLRKWC 1083
            +TA+RL++FLG+ MVKD GL C+YI++ +P+G PV+ERA+P+AIF+++  + + +LR+W 
Sbjct: 1056 STAKRLAEFLGEQMVKDAGLACKYIISKKPEGAPVTERAIPLAIFQSEPSVRRHHLRRWL 1115

Query: 1084 K--TSSDVGIRSIVDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLYKKVREK 1141
            K  T  D  IR ++DW+YY +RL   IQKIITIPAA+Q ++NPVPRV HPDWL+KK+ EK
Sbjct: 1116 KDNTMGDADIRDVLDWNYYIERLGGTIQKIITIPAALQGLANPVPRVQHPDWLHKKMLEK 1175

Query: 1142 EDKFRQRKLVDIFSSLKKDDFLNKTCNAETNLMDENVEDLEDFPKKRRNSVNGPRPIVRC 1201
             D  +QR++ ++F+S  K   L           ++ + D+ED   K         PIV  
Sbjct: 1176 NDVLKQRRINEMFTSRPKPKPLATE--------EDKLADMEDLAGKDGGEGAAGCPIV-- 1225

Query: 1202 FEVNNEQKTVKTTDQVDSLRQQLEPSEVSDQQPSSQNAIDTENIDRIVDYKGWLELKKRK 1261
                 ++K V+  +  +   ++ +P   S +Q         E    IV+   W+  +K+K
Sbjct: 1226 ----TKRKRVQLEEHDE---EEAQPQATSWRQALGAPPPIGETRKTIVE---WVRFQKKK 1275

Query: 1262 WKDNLDRRKKQKLGSLRASHQANGVSESLGDMINHKEAQRRTGVGSYFRRQETAMTRCHW 1321
            WK   D+R++ +  S R   +   V  + G             +G + RR +  +    W
Sbjct: 1276 WKWQQDQRQRNRQASKRTRGEDPPVVRATGSTAT---------LGGFLRRAQRTLLDQPW 1326

Query: 1322 QIIQLVPSSQSGVFLAWVVVEGIMVRIPITVPRLFYLN--SKDPIVEKFPGRRVNKTLPH 1379
            QI+QLVP    G F  W ++   + +I +TVPR+FY+N  S  P  E    R+VN+ LP 
Sbjct: 1327 QIVQLVPVDDLGHFTVWALIGEELHKIKLTVPRIFYVNQRSAAPPEEGQLWRKVNRVLPR 1386

Query: 1380 GRRSFNLIEVMIDEDQFRKESKKLAALLADPEVE 1413
             R  FNL    + E  FR  S  + A LA P++E
Sbjct: 1387 SRPVFNLYRYSVPEQLFRDNSLGMLADLATPDIE 1420


>gi|212543255|ref|XP_002151782.1| DNA polymerase epsilon, catalytic subunit A/POL2, putative
            [Talaromyces marneffei ATCC 18224]
 gi|210066689|gb|EEA20782.1| DNA polymerase epsilon, catalytic subunit A/POL2, putative
            [Talaromyces marneffei ATCC 18224]
          Length = 2224

 Score = 1358 bits (3515), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 700/1413 (49%), Positives = 937/1413 (66%), Gaps = 76/1413 (5%)

Query: 27   LEAKLGYDLFSEGDKRLGWLLTFASSSLEDEDTRKVYSCIDLYFVSQDGSTFKSKYKFRP 86
            ++  +G+  F  G+KR GWL+   S+++ED +     + +D YF+  DG+ FK+  ++ P
Sbjct: 55   IDETMGFPRFEAGEKRAGWLINMHSTTVEDPNIPGGRAGVDFYFLDDDGNNFKATVEYDP 114

Query: 87   YFYAATKEKMEMDVEAYLRRRYESQIADIEILEKEDLDLKNHLSGLHKSYLKISFDTVQQ 146
            YF  A K   E +VE + RR  E  + D+  + +EDL + NHL G  +++L++SF  V  
Sbjct: 115  YFLIAVKGGREQEVEEWCRRILEGVVKDVRRVVREDLQMPNHLLGNRRTFLRLSFANVGN 174

Query: 147  LMDVKKDLLHVVERNQAKFDAAEAYESI-------------LTGKREQRPQDFLDCIVDL 193
            L++ +K L+ + E+N+    A + Y  +             L G R     +  D I+D+
Sbjct: 175  LLEARKLLMPIAEKNKKNVTAMDTYAEMARTSAGFDLFDDELDGSRPNATLNASDFIIDI 234

Query: 194  REYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLLEKRVDLLQRAEVHVCAFDIETTKLPL 253
            REYDVPYH+R +ID D+R G+WY+V        L    + LQRA+  V AFDIETTKLPL
Sbjct: 235  REYDVPYHVRVSIDKDIRIGKWYNVEAKHGVTKLTCIEERLQRADPVVLAFDIETTKLPL 294

Query: 254  KFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNVNNEIEL 313
            KFPDA  D IMMISYM+DG G+LI NRE V EDI D EYTPKPE+ G F + N  +E  +
Sbjct: 295  KFPDAVIDQIMMISYMIDGNGFLITNREIVSEDINDFEYTPKPEYSGPFVIFNEPDERHV 354

Query: 314  LRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDKNQGEC-RAKF 372
            L  +F+H++E KP +  TYNGD+FDWPF+E RA+  G  M  E+GF+  KN  +  ++  
Sbjct: 355  LERFFSHIKEAKPTVIATYNGDFFDWPFVEARASVLGIDMYAEIGFK--KNSEDIYQSDH 412

Query: 373  ACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQMMASYSVS 432
            + H+DCFAWV RDSYLPQGS+GLKAVT AKLGYDP E++PE M R+A E+PQ +A YSVS
Sbjct: 413  SAHMDCFAWVNRDSYLPQGSRGLKAVTVAKLGYDPDELDPELMTRYASERPQTLAEYSVS 472

Query: 433  DAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVICPNKHQ 492
            DAVATYYLYM Y+HPFIFSL TIIP++PD+VLRKG+GTLCEMLLMVQAYK  +I PNKH+
Sbjct: 473  DAVATYYLYMKYIHPFIFSLCTIIPLNPDDVLRKGTGTLCEMLLMVQAYKGEIILPNKHK 532

Query: 493  SDPEKFYRNHLLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQLLNNLDRDLQYAI 552
              PE FY  HLL+SETY+GGHVE +E+GVFRSD+P +F +DP A ++LL +LD  L+++I
Sbjct: 533  DPPESFYEGHLLDSETYVGGHVESIEAGVFRSDIPVNFAVDPKAIDELLQDLDAALKFSI 592

Query: 553  KVEGKMDLESVSNYDEVKNAIMEKLLRLQEEPIREECPLIYHLDVAAMYPNIILTNRLQP 612
             VE K  LE V+NY+EVK  I+E+L  L+  P R E PLIYHLDVA+MYPNI+ TNRLQP
Sbjct: 593  VVEEKKSLEDVTNYEEVKAQIVERLESLKATPNRSERPLIYHLDVASMYPNIMTTNRLQP 652

Query: 613  PSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYYHLKKQIESEFVDGTNGHL 672
             S+  +  C ACDFNRPGKTC R+L W WRGE    KR +Y  +++ +E+E   G + + 
Sbjct: 653  DSMKQESDCAACDFNRPGKTCDRRLPWAWRGEFLPAKRDEYNMIRRAVENERFPGKHKNA 712

Query: 673  S-KSFLDLPKMEQQSRLKDRLKKYCQKAYKRVLDKPVTELREAGICMRENSFYVDTVRSF 731
              + F D+   EQ + +K RL++Y +K Y ++ D    E +EA IC REN FYVDTVR F
Sbjct: 713  PMRHFRDMQTEEQAAIIKKRLQEYSKKIYHKIHDSKTIE-KEAIICQRENPFYVDTVRDF 771

Query: 732  RDRRYEYKGLNKVWKGKLSEAKASGNS-IKIQEAQDMVVLYDSLQLAHKCILNSFYGYVM 790
            RDRRY++KG  KVWKGK    KA+G S  +I EA+ M+VL+DSLQLAHK ILNSFYGYVM
Sbjct: 772  RDRRYDFKGKQKVWKGKTESLKAAGASNAEIDEAKKMIVLFDSLQLAHKVILNSFYGYVM 831

Query: 791  RKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLPGSFPENFTFKT 850
            RKG+RWYSMEMAGV   TGA+IIQ AR L+E+IG+PLELDTDGIWC+LP +FPENF F  
Sbjct: 832  RKGSRWYSMEMAGVTCLTGARIIQMARELVERIGRPLELDTDGIWCMLPATFPENFAFTL 891

Query: 851  KDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEFEVDGPYKAMI 910
            K+  KK+ +SYPCVMLN  V    TN QYQTL+DP S  YET S+ SI FEVDGPYKAMI
Sbjct: 892  KN-GKKMALSYPCVMLNHLVHGRFTNHQYQTLIDPKSFKYETTSDNSIFFEVDGPYKAMI 950

Query: 911  LPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFLHGSTIEE 970
            LPASKEE   +KKRYAVFNDDG+LAELKGFE+KRRGELKLIK+FQ ++F  FL G  + E
Sbjct: 951  LPASKEEDKNLKKRYAVFNDDGSLAELKGFEVKRRGELKLIKIFQTQIFKFFLDGEDLAE 1010

Query: 971  CYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLADYGEQKSCAVTTARRLS 1030
             Y +VA VANRWLD+L   G  +AD ELID I E+ +MSK++ +YG QKS ++TTA+RL+
Sbjct: 1011 TYQSVARVANRWLDVLYEHGATLADEELIDLICENRSMSKTVEEYGAQKSTSITTAKRLA 1070

Query: 1031 DFLGDTMVKDKGLRCQYIVACEPQGTPVSERAVPVAIFETDAEIMKFYLRKWCKTS-SDV 1089
            +FLG+ M+KD+GL C+YI++ +P+  PV+ERA+PV IF  +  I +F+LRKW K   SD+
Sbjct: 1071 EFLGEQMIKDRGLNCRYIISSKPKNAPVTERAIPVTIFSAEENIKRFFLRKWLKDDPSDM 1130

Query: 1090 GIRSIVDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLYKKVREKEDKFRQRK 1149
              RSI+DW YY +RL S IQK+ITIPAA+QK+ NPVPRV HPDWL +++  ++DKF+Q+K
Sbjct: 1131 DPRSIIDWDYYLERLGSVIQKLITIPAALQKLGNPVPRVQHPDWLQRRINTRDDKFKQKK 1190

Query: 1150 LVDIFSSLKKDDFLNKTCNAETNLMDENV---EDLEDFPKKRRNSVNGPRPIVRCFEVNN 1206
            + D+F         N       N++D  V    D+ED   +                   
Sbjct: 1191 MTDMFEK-------NPLSEKSANILDHRVPHNADMEDMATQ-----------------TM 1226

Query: 1207 EQKTVKTTDQVDSLRQQLEPSEVSDQQPSSQNAIDTENIDRIVDYKGWLELKKRKWKDNL 1266
            E+K +  + ++   R+  E   ++   P +       +I    DY+G+++ +K+KWK   
Sbjct: 1227 EKKKLSPSSKMVQKRKLPEGPTIASLDPYASLPAVMPSITE--DYEGFIKYQKQKWKIQK 1284

Query: 1267 DRRKKQKLGSLRASHQANGVSESLGDMINHKEAQRRTGVGSYFRRQETAMTRCHWQIIQL 1326
              R +++        Q  G      D ++H           YFR Q   +    W ++QL
Sbjct: 1285 QARIRRR--------QLFGEKSKASDSLSH-----------YFRNQAQILFINTWTVLQL 1325

Query: 1327 VPSSQSGVFLAWVVVEGIMVRIPITVPRLFYLNSKD---PIVEKFPG---RRVNKTLPHG 1380
              +   G   A+V+++  +  + + VPR  ++N KD   P VE  P     +VN TLP+G
Sbjct: 1326 RETDVPGEVRAFVLIDRRVHALTVKVPRQLFINFKDDSLPEVE-LPSCEVEKVNNTLPNG 1384

Query: 1381 RRSFNLIEVMIDEDQFRKESKKLAALLADPEVE 1413
              S +L ++ + ED +  ES+K+A LL  P VE
Sbjct: 1385 HPSVHLFKLTLPEDVYLGESEKMAVLLNHPSVE 1417



 Score =  259 bits (663), Expect = 9e-66,   Method: Compositional matrix adjust.
 Identities = 171/629 (27%), Positives = 300/629 (47%), Gaps = 66/629 (10%)

Query: 1407 LADPEVEVLGWQQNAAKIGMQRCAASSQWFNERISLARYAHI------------------ 1448
            ++D ++  LGWQ   AK  +        W      LARY  +                  
Sbjct: 1611 VSDTDMPPLGWQSFIAKRLLTHYLYLGSWIQHLKMLARYGDVPVCNLESDDPRYLIDVSY 1670

Query: 1449 ----------LWISDDGVPDLGGTSEEDECFA-DEVHQPVLTYPGAYRKVSVELKIHHLS 1497
                      LW S    PD  G  ++D   + D V  P +  PG Y  VS+EL++ +L+
Sbjct: 1671 ARRLEKSNVVLWWSAGPRPDHAGYEKDDILGSLDTVEMPSVNVPGTYTTVSIELEVRNLA 1730

Query: 1498 VNALLKSNQVNEMEGGGLFGFDQDMNSGPYNNELCGFDETTSSAPAFRVVKQLIQRCLTD 1557
            +N +L S+ +N++EG      D  + S   + +   + E   ++    V+++++++  ++
Sbjct: 1731 INTILTSSIINDLEGS-----DTLLASTKESADGVLYSEKAFASAGVFVLREMVKQWWSE 1785

Query: 1558 AVTSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEFRKLGATIIF 1617
            A T GN  AD ++QHL RW+ SP S L+D  LH  +  + +K F  L+ +FR++G+ +IF
Sbjct: 1786 ACT-GNTMADIMVQHLVRWVESPSSCLYDRSLHYYVRMMSRKSFQQLMGDFRRVGSNVIF 1844

Query: 1618 ANFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLFMDQYNYGGI 1677
            A+ +++++ T K ++  A AY   +LK+++   +F +I+LE   +W  L++ D++NYGG 
Sbjct: 1845 ASPTRLLLQTTKQEVGTAYAYSQYILKSIRANPIFHFIDLELKEYWDFLVWYDEFNYGG- 1903

Query: 1678 PARADESLDDDS-QVDIVSSWNIAEYLPKEIQDHFVLVVSEFMYIPWKHAQKLAASRASL 1736
                 E ++ +S Q+D +  W +  +LP  +Q  F   V E  YI   H  K    R   
Sbjct: 1904 -KGCQEVVEAESQQLDTIMHWQMNRFLPNPMQQVFNDWVIE--YIDLMHGLK----RGDE 1956

Query: 1737 QEGSSCTPSIT----VAAAENFESHIVQYVKGEISSYFTGKLLSIVR----DAIHHMKKM 1788
             +  S TP +T     +  E  +  +  ++  + S     +++ ++R    + +H     
Sbjct: 1957 GDEDSSTPRLTQIPIKSLTETTDDEVTNFLTDKFSKPLKKQIVGLIRRQRDELLHPELAS 2016

Query: 1789 NNDQHNSPGVMQTAANIHKVDAPLEFIKHVCAAFALDQNVQHDVLVMRKNLLKYVRVREF 1848
            + D    PG +    N    +A LE +K +    +L +    +  ++R+ LL    VREF
Sbjct: 2017 DYDFPVLPGAL-VDPNTENRNAVLELVKALMQVLSLSKTTTLETRILRRELLALFEVREF 2075

Query: 1849 APEAEFRDPCPSFILPNVICSYCNDCRDLDLCRDMALL-----------AQDWHCAMPQC 1897
            + E  F +P  S  LP + CS C   RDLDLCRD  +L            + W C  P C
Sbjct: 2076 SKEGRFENPSASLKLPELTCSACCLIRDLDLCRDEDILPDPDTDGKKTAPKAWRC--PFC 2133

Query: 1898 GQPYDREVMENALLQIVRQRERLYHLQDLVCIRCNQVKAAHLAEQCACAGSFRCKEDASD 1957
               YDR   E  L+  V      +  QDL C +CN +K +   E C+C+G +    D ++
Sbjct: 2134 QTEYDRLAQEERLVGEVHGVIVSWQAQDLKCSKCNSLKVSAFMEHCSCSGKWMTTLDRNE 2193

Query: 1958 FRSKMQIFLNIANRQGFQLLQECTSWILE 1986
             + K+++ L++A     +LL+  +  +L+
Sbjct: 2194 IQKKLRVMLSVAKYHDLKLLEGVSEEVLQ 2222


>gi|189200733|ref|XP_001936703.1| DNA polymerase epsilon catalytic subunit A [Pyrenophora
            tritici-repentis Pt-1C-BFP]
 gi|187983802|gb|EDU49290.1| DNA polymerase epsilon catalytic subunit A [Pyrenophora
            tritici-repentis Pt-1C-BFP]
          Length = 2215

 Score = 1358 bits (3515), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 694/1415 (49%), Positives = 929/1415 (65%), Gaps = 95/1415 (6%)

Query: 27   LEAKLGYDLFSEGDKRLGWLLTFASSSLEDEDTRKVYSCIDLYFVSQDGSTFKSKYKFRP 86
            ++  +G+  F  G KR+GWL+   S+++ED D     + +D YF+ +DG TFK+  ++ P
Sbjct: 55   IDESMGFARFDSGKKRVGWLVNMHSTTVEDGDVPGGKAGVDFYFIGEDGDTFKATLEYDP 114

Query: 87   YFYAATKEKMEMDVEAYLRRRYESQIADIEILEKEDLDLKNHLSGLHKSYLKISFDTVQQ 146
            YF  A K+  E +VE Y +R YE  I +I+ +EKEDL + NHL+G  + +L++SF  V  
Sbjct: 115  YFLLAVKKGREHEVEEYCKRAYEGLIKNIKTIEKEDLSMPNHLTGYRRKFLQLSFANVND 174

Query: 147  LMDVKKDLLHVVERNQAKFDAAEAYESILTG---------------KREQRPQDFLDCIV 191
            L+ V+K +  VVE+N+   +A + Y  +  G               KR     D  D I+
Sbjct: 175  LLAVRKAVNPVVEKNKKNVNAMDTYAEVANGNGAFDFFDNDEYEYEKRFTTTVDASDFIL 234

Query: 192  DLREYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLLEKRVDLLQRAEVHVCAFDIETTKL 251
            D+REYDVPYH+R AID DVR G WY V        ++   D L  A+  V A+DIETTKL
Sbjct: 235  DIREYDVPYHVRVAIDKDVRIGNWYTVEAKHGVISIKCIEDRLTPADPVVMAYDIETTKL 294

Query: 252  PLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNVNNEI 311
            PLKFPDA  D IMMISYM+DGQG+LI NRE V EDI+D EYTPKPE++G F + N  +E 
Sbjct: 295  PLKFPDAAIDQIMMISYMIDGQGFLITNREIVSEDIQDFEYTPKPEYQGPFMIFNEPDEK 354

Query: 312  ELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDKNQGEC-RA 370
             LL  +F H++  KP + VTYNGD+FDWPF+E R++  G  M +E+GF+  KN  +  ++
Sbjct: 355  ALLERFFEHIKIAKPTVIVTYNGDFFDWPFVEARSSVQGIDMYQEIGFR--KNSEDVYQS 412

Query: 371  KFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQMMASYS 430
             +  H+D F WV RDSYLPQGS+GLKAV  AKLGYDP E++PE M  +A E+PQ +A YS
Sbjct: 413  DYCAHMDAFCWVSRDSYLPQGSRGLKAVCLAKLGYDPDELDPELMTPYAAERPQTLAEYS 472

Query: 431  VSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVICPNK 490
            VSDAVATYYLYM YVHPFIF+L  I+P+ PD+ LRKG+GTLCEMLLMVQAY+  ++ PNK
Sbjct: 473  VSDAVATYYLYMKYVHPFIFALCKILPLGPDDALRKGTGTLCEMLLMVQAYQKGIVLPNK 532

Query: 491  HQSDPEKFYRNHLLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQLLNNLDRDLQY 550
            HQ+  E F+  HLLESETY+GGHVE LE+GVFRSD+  +F +DP+A ++LLN+LD  L++
Sbjct: 533  HQAPKEAFWEGHLLESETYVGGHVEALEAGVFRSDIAYNFAVDPTAIDELLNDLDAALKF 592

Query: 551  AIKVEGKMDLESVSNYDEVKNAIMEKLLRLQEEPIREECPLIYHLDVAAMYPNIILTNRL 610
            +I+VE K  +E V+NYDE+K  I+EKLL+L+E P R E PLIYHLDVA+MYPNI+ T RL
Sbjct: 593  SIEVEEKKKMEDVTNYDEIKAEIVEKLLQLRETPNRSERPLIYHLDVASMYPNIMTTYRL 652

Query: 611  QPPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYYHLKKQIESEFVDGTNG 670
            QP S++ +  C ACDFNRPGKTC R++ W WRGE    KR +Y  ++  +E+E   G   
Sbjct: 653  QPDSMINEGNCAACDFNRPGKTCDRRMPWAWRGEYLPAKRDEYNMVRNALENEQFPGRFP 712

Query: 671  HLSK-SFLDLPKMEQQSRLKDRLKKYCQKAYKRVLDKPVTELREAGICMRENSFYVDTVR 729
            +  K +F DL   EQ + ++ RL  Y +K Y +V D    E REA IC REN FYVDTV 
Sbjct: 713  NSPKRTFQDLSADEQATLIRKRLTDYSKKIYHKVHDATTIE-REAIICQRENPFYVDTVS 771

Query: 730  SFRDRRYEYKGLNKVWKGKLSEAKASGN-SIKIQEAQDMVVLYDSLQLAHKCILNSFYGY 788
             FRDRRY++KG  KVWKGK    KA+G  + +I++A+ M++L+DS+QLAHK ILNSFYGY
Sbjct: 772  GFRDRRYDFKGKQKVWKGKTEALKAAGAPASEIEDAKKMIILFDSMQLAHKVILNSFYGY 831

Query: 789  VMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLPGSFPENFTF 848
            VMRKG+RWYS+EMAGV   TGA+IIQ AR L+E+IG+PLELDTDGIW +LP +FPENF+F
Sbjct: 832  VMRKGSRWYSLEMAGVTCLTGARIIQLARSLVERIGRPLELDTDGIWAILPATFPENFSF 891

Query: 849  KTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEFEVDGPYKA 908
            K  +  KKLTISYP                    +DP +  YE HS+ SI FEVDGPYKA
Sbjct: 892  KLSN-GKKLTISYP--------------------LDPETFRYEKHSDNSIFFEVDGPYKA 930

Query: 909  MILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFLHGSTI 968
            MILP SKEE   +KKRYAVFN DG+LAELKGFE+KRRGELKLIK FQA++F  FL G+T+
Sbjct: 931  MILPTSKEEDKNLKKRYAVFNHDGSLAELKGFEVKRRGELKLIKNFQAQIFKFFLEGTTL 990

Query: 969  EECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLADYGEQKSCAVTTARR 1028
            EE Y AVA VANRWLD+LD +G  +AD ELID I E+  M+K+L +YG QKS A+TTA+R
Sbjct: 991  EETYGAVAKVANRWLDILDTRGATLADEELIDLIVENKNMTKTLEEYGTQKSTAITTAKR 1050

Query: 1029 LSDFLGDTMVKDKGLRCQYIVACEPQGTPVSERAVPVAIFETDAEIMKFYLRKWCKTS-S 1087
            L++FLG+ MVKDKGL C+YI++  P+  PV+ERAVP+AIF  +  + +++LRKW +    
Sbjct: 1051 LAEFLGEQMVKDKGLNCKYIISKTPRNAPVTERAVPLAIFSAEESVKRYFLRKWLREDPG 1110

Query: 1088 DVGIRSIVDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLYKKVREKEDKFRQ 1147
            ++ IR+I+DW YY++RL+S IQK+ITIPAA QKV NPVPRV HPDWL +++R+KEDK +Q
Sbjct: 1111 EMDIRTILDWDYYRERLASVIQKLITIPAAYQKVRNPVPRVPHPDWLNRRIRQKEDKLQQ 1170

Query: 1148 RKLVDIFSSLKKDDFLNKTCNAETNLMDENVEDLEDFPKKRRNSVNGPRPIVRCFEVNNE 1207
             K+ D+FS   K    N   N   N   +   DLEDF   +                N  
Sbjct: 1171 TKMTDMFS---KKVLTNGDANVANN---KGSGDLEDFGSSKLTQ-------------NQS 1211

Query: 1208 QKTVKTTDQVDSLRQQLEPSEVSDQQPSSQNAIDTENIDRIVDYKGWLELKKRKWKDNLD 1267
            Q       ++ + R++ EP+ V    P +       +ID+  DY GWL  +K+KWK   +
Sbjct: 1212 QMKKGIVTKMVAKRKEPEPA-VPIVDPYAALPKVMPSIDK--DYSGWLMYQKQKWKIQKE 1268

Query: 1268 RRKKQKLGSLRASHQANGVSESLGDMINHKEAQRRTGVGSYFRRQETAMTRCHWQIIQLV 1327
             RK+++                   +   K       +G++FR Q  ++    WQ++QL 
Sbjct: 1269 ARKRRR------------------QLFGEKAVDSSDAIGTFFRNQAQSLYISTWQLVQLR 1310

Query: 1328 PSSQSGVFLAWVVVEGIMVRIPITVPRLFYLNSKDPIVEKFPG---------RRVNKTLP 1378
            P+   G   A+V+++  +  + I VPR  YLN +    E  P          + VN TLP
Sbjct: 1311 PTETPGEVRAFVLIDKKIHALKIIVPRQLYLNLRS---EDLPDVSISGCSVEKVVNHTLP 1367

Query: 1379 HGRRSFNLIEVMIDEDQFRKESKKLAALLADPEVE 1413
            +G  S +L ++ + E+ +  E+K ++AL     VE
Sbjct: 1368 NGHPSIHLFKLQMSEETYVNEAKTISALFNHSSVE 1402



 Score =  235 bits (600), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 163/637 (25%), Positives = 300/637 (47%), Gaps = 77/637 (12%)

Query: 1408 ADPEVEVLGWQQNAAKIGMQRCAASSQWFNERISLARYAH-------------------- 1447
            +D ++  LGWQ   A+  +        W    + LARY                      
Sbjct: 1598 SDKQLPPLGWQAFIARRLVGHYLDLGSWVAHLLELARYGDVPLCNLESNDPRFLIDVAYA 1657

Query: 1448 --------ILWISDDGVPDLGGTSEEDECFA--DEVHQPVLTYPGAYRKVSVELKIHHLS 1497
                    ILW S    PD  G  E+D+  A  + V  P +  PG Y  V +++ + +L+
Sbjct: 1658 RRLQKDRVILWWSGQAKPDHAGY-EKDDVLAPLETVEMPSINNPGTYSSVCIDINVRNLA 1716

Query: 1498 VNALLKSNQVNEMEGGGLFGFDQDMNSGPYNNELCGFDETTSSAPA-FRVVKQLIQRCLT 1556
            +N +L S+ VNE++G     F+   +    N+    F    + A A   V++++++    
Sbjct: 1717 INTILSSSLVNELKGADSVSFNPAPSYDSTNDGSNVFHSDNAFASAGITVLREMVKDWWV 1776

Query: 1557 DAVTSGNVF--ADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEFRKLGAT 1614
            +AV + + F  AD ++QHL RW+ SP S L+D  LH  +  + +K    L+ +F+++G+ 
Sbjct: 1777 EAVQANHGFSMADVMVQHLVRWVSSPGSFLYDRSLHYYVQMMSKKTLQQLMTDFKRVGSH 1836

Query: 1615 IIFANFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLFMDQYNY 1674
            I+FA+ +++++ T K ++  A +Y   ++K ++ + LF+++ELE   +W  L++ D++NY
Sbjct: 1837 IVFASPNRLLLQTTKAEVGNAYSYSQYIIKTIKLKPLFQFMELEIKEYWDYLVWYDEFNY 1896

Query: 1675 GGIPARADESLDDDSQVDIVSSWNIAEYLPKEIQDHFVLVVSEFMYIPWKHAQKLAASRA 1734
            GG    ++ + D++  V+ +  W +A++LP + Q  F   V EF  I   HA+K    R 
Sbjct: 1897 GG-KGCSEVTEDENQPVENIMCWQLAQFLPPKFQPTFNDWVVEF--IELMHARK----RP 1949

Query: 1735 SLQEGSSCTPSIT------VAAAENFESHIVQYVKGEISSYFT---GKLLSIVRDAIHH- 1784
             + E  S TP +T      +    N ++ +       +   FT    K +++     H  
Sbjct: 1950 QITEDGS-TPRVTQIPLRPLTVDPNEQTQL-------LPKTFTKPLSKQMNVFAKKQHAE 2001

Query: 1785 -MKKMNNDQHNSPGVMQTAANIHKVDAPLEFIKHVCAAFALDQNVQHDVLVMRKNLLKYV 1843
             +  +    +  P +    +++   +A L+ +K +    +LD+ +  +   +RK LL   
Sbjct: 2002 ILDPLFASDYVFPEL--PGSHLKFNNAVLQLVKSIMQVLSLDRAISLEARALRKELLNLF 2059

Query: 1844 RVREFAPEAEFRDPCPSFILPNVICSYCNDCRDLDLCRDMALLA-------------QDW 1890
             ++EF+ EA F +P  + ++  VIC  C   RDLDLCRD +LL                W
Sbjct: 2060 DIKEFSAEATFVNPSAALVVRGVICDECTSSRDLDLCRDSSLLPVVVSNNSDAAPVLPKW 2119

Query: 1891 HCAMPQCGQPYDREVMENALLQIVRQRERLYHLQDLVCIRCNQVKAAHLAEQCACAGSFR 1950
             C    C   YD+  +E  L+  V++    +  QDL C +C ++++    E CACAG + 
Sbjct: 2120 KCD--NCESSYDKRRIEEQLVGEVQKMVLEWCTQDLKCAKCKRLRSNEFMEHCACAGEWV 2177

Query: 1951 CKEDASDFRSKMQIFLNIANRQGFQLLQECTSWILEV 1987
              ++  D + +  ++ N+A      +L+      LE 
Sbjct: 2178 ATKNRQDMKKRAMVYGNVAKFYALGMLEAVVEECLEA 2214


>gi|367031370|ref|XP_003664968.1| hypothetical protein MYCTH_2139989 [Myceliophthora thermophila ATCC
            42464]
 gi|347012239|gb|AEO59723.1| hypothetical protein MYCTH_2139989 [Myceliophthora thermophila ATCC
            42464]
          Length = 2271

 Score = 1357 bits (3513), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 697/1415 (49%), Positives = 930/1415 (65%), Gaps = 68/1415 (4%)

Query: 26   ELEAKLGYDLFSEGDKRLGWLLTFASSSLEDEDT--RKVYSCIDLYFVSQDGSTFKSKYK 83
            +++  +G+  +  G KR GWL+    +S++D         + +D YF+ +DGSTFK+  +
Sbjct: 54   QIDENMGFARYDAGRKREGWLVNVQPTSIDDPRVPGGGGRAALDCYFIEEDGSTFKATVE 113

Query: 84   FRPYFYAATKEKMEMDVEAYLRRRYESQ-IADIEILEKEDLDLKNHLSGLHKSYLKISFD 142
            + PYF  A ++  E +VE + +R      I +I  +EK+DL + NHL G  +++L++ F 
Sbjct: 114  YDPYFLIACRKGHETEVEEWCKRVPGGGVIKNIRRVEKDDLKMPNHLLGYRRTFLELRFH 173

Query: 143  TVQQLMDVKKDLLHVVERNQAKFDAAEAYESILTGK----------------REQRPQDF 186
             VQ LM  ++D++ + E+N+   DA + Y  + T                        + 
Sbjct: 174  NVQDLMAARRDIMPIAEKNKKGMDAMDTYAEVATANGNFDLFDDDPRADDRRNNASFAEA 233

Query: 187  LDCIVDLREYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLLEKRVDLLQRAEVHVCAFDI 246
             D IVD+REYDVPYH+R  ID D+R G WY V   +    + +  + L  A+  V AFDI
Sbjct: 234  SDFIVDIREYDVPYHVRVMIDLDIRVGNWYFVEAKNGVTTVTRNEERLAPADPVVMAFDI 293

Query: 247  ETTKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTN 306
            ET K PLKFPD   D IMMISYM+DGQG+LI NRE V EDI+D EYTPKPE+ G F + N
Sbjct: 294  ETCKAPLKFPDPAVDQIMMISYMIDGQGFLITNREVVSEDIDDFEYTPKPEYPGPFMIFN 353

Query: 307  VNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDKNQG 366
              +E  ++  +F H++E +P +  TYNGD+FDW F+E RA+ +G  M  E+G++ D ++ 
Sbjct: 354  EPDEKAVIERFFLHVKEARPTVIATYNGDFFDWAFVEARASVNGIDMYHEIGWKKD-SED 412

Query: 367  ECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQMM 426
            + ++ ++ H+DCF WV RDSYLPQGS+GLKAVT AKLGYDP E++PE M  +A E+PQ +
Sbjct: 413  QYKSNYSVHMDCFHWVNRDSYLPQGSRGLKAVTVAKLGYDPDELDPELMTPYASERPQTL 472

Query: 427  ASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVI 486
            A YSVSDAVATYYLYM YVHPFIFSL TI+P+ PD+ LRKG+GTLCEMLLMVQAYK  ++
Sbjct: 473  AEYSVSDAVATYYLYMKYVHPFIFSLCTILPLGPDDTLRKGTGTLCEMLLMVQAYKNEIV 532

Query: 487  CPNKHQSDPEKFYRNHLLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQLLNNLDR 546
             PNKH +  E F+  HLL+SETY+GGHVE +E+GVFRSD+P +F +DP+A ++LL +LD 
Sbjct: 533  LPNKHVAPKEAFWDGHLLDSETYVGGHVESIEAGVFRSDIPVNFAVDPAAVDELLRDLDA 592

Query: 547  DLQYAIKVEGKMDLESVSNYDEVKNAIMEKLLRLQEEPIREECPLIYHLDVAAMYPNIIL 606
             L ++I VE K  +E V NY+EVK  I  KL  L+E P R E PLIYHLDVA+MYPNI+ 
Sbjct: 593  ALTFSITVEEKKSMEDVVNYEEVKEQIAAKLRDLKETPNRHERPLIYHLDVASMYPNIMT 652

Query: 607  TNRLQPPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYYHLKKQIESE-FV 665
            TNRLQP S++T+  C ACDFNRPGKTC R+L W WRGE    KR +Y  ++  +E+E F 
Sbjct: 653  TNRLQPDSMITESDCAACDFNRPGKTCDRRLPWAWRGEYLPPKRDEYNMIRHALENEKFP 712

Query: 666  DGTNGHLSKSFLDLPKMEQQSRLKDRLKKYCQKAYKRVLDKPVTELREAGICMRENSFYV 725
              T     +S+ DL + EQ + +K RL+ Y QK Y ++ D   T +REA IC REN FY+
Sbjct: 713  GKTANSPMRSWQDLSEDEQANLIKKRLQLYSQKVYHKIRDS-TTIIREAIICQRENPFYI 771

Query: 726  DTVRSFRDRRYEYKGLNKVWKGKLSEAKASGNSI-KIQEAQDMVVLYDSLQLAHKCILNS 784
            +TVR FRDRRY+YKG  KVWKGK    K+SG S  +I+ A+ M+VL+DSLQLAHK ILNS
Sbjct: 772  NTVRDFRDRRYDYKGKAKVWKGKTEALKSSGASASEIENAKKMIVLFDSLQLAHKVILNS 831

Query: 785  FYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLPGSFPE 844
            FYGYVMRKG+RWYSMEMAGV   TGA IIQ AR L+E++G+PLELDTDGIWC+LP +FPE
Sbjct: 832  FYGYVMRKGSRWYSMEMAGVTCLTGATIIQLARSLVERLGRPLELDTDGIWCMLPATFPE 891

Query: 845  NFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEFEVDG 904
            NF FK K+  KKL ISYPCVMLN  V    TN QYQTLVDP +  YETHS+ SI FEVDG
Sbjct: 892  NFAFKLKN-GKKLAISYPCVMLNHLVHARFTNHQYQTLVDPKTFKYETHSDNSIFFEVDG 950

Query: 905  PYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFLH 964
            PYKAMILP SKEE   +KKRYAVFN+DGTLAELKGFE+KRRGELKLIK+FQ ++F  FL 
Sbjct: 951  PYKAMILPTSKEEDKNLKKRYAVFNEDGTLAELKGFEVKRRGELKLIKIFQQQIFKFFLE 1010

Query: 965  GSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLADYGEQKSCAVT 1024
            G+T+ ECY+AVA VANRWLD+L N+G  +AD EL++ ISE+ +M+K+L +Y  QKS ++T
Sbjct: 1011 GTTLAECYAAVAKVANRWLDVLHNKGSTLADEELMELISENRSMTKTLEEYSGQKSTSIT 1070

Query: 1025 TARRLSDFLGDTMVKDKGLRCQYIVACEPQGTPVSERAVPVAIFETDAEIMKFYLRKWCK 1084
            TA+RL+DFLG+ MVKDKGL C++I+   P+G PV+ERAVPVAIF  + E  + YL+KW K
Sbjct: 1071 TAKRLADFLGEGMVKDKGLNCKFIICARPKGAPVTERAVPVAIFSAEEETKRLYLKKWLK 1130

Query: 1085 TS-SDVGIRSIVDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLYKKVREKED 1143
               +D   R+++DW YY +RL S IQK+ITIPAA+QKV NPVPRV HPDWL +++  K+D
Sbjct: 1131 EEPADTDPRALLDWDYYLERLGSVIQKLITIPAALQKVRNPVPRVPHPDWLQRRINLKDD 1190

Query: 1144 KFRQRKLVDIFSSLKKDDFLNKTCNAETNLMDENVEDLEDFPKKRRNSVNGPRPIVRCFE 1203
            K +Q+KL DIF S  K   L +   + TNLM  +VED+    K        P+ I     
Sbjct: 1191 KMKQKKLTDIFGSTTKGGPLEEISLSSTNLMG-DVEDIGQLLK--------PKTISSAIS 1241

Query: 1204 VNNEQKTVKTTDQVDSLRQQLEPSEVSDQQPSSQNAIDTENIDRIVDYKGWLELKKRKWK 1263
             + +    +        R+  EP+E  D   +    + + +     DY  +LE +K KW 
Sbjct: 1242 ASQKAPVAQK-------RKSPEPAETQDPFATLPKKMPSPS----EDYPAFLEYQKLKW- 1289

Query: 1264 DNLDRRKKQKLGSLRASHQANGVSESLGDMINHKEAQRRTGVGSYFRRQETAMTRCHWQI 1323
                  K QK    R  H           +   + +  ++ +   FR Q     R  WQ+
Sbjct: 1290 ------KLQKQARARRRH-----------LFGDRRSNIQSSIQQTFRNQAEMTFRNTWQL 1332

Query: 1324 IQLVPSSQSGVFLAWVVVEGIMVRIPITVPRLFYLNSK-----DPIVEKFPGRRVNKTLP 1378
            +QL  +   G+ LA V+++  +  + I VPR  +LN K     D  VE     +V+ TLP
Sbjct: 1333 LQLRATDSPGIVLAHVLIDSKIHSVRINVPRQVFLNLKSQELPDIEVEGCQVEQVHHTLP 1392

Query: 1379 HGRRSFNLIEVMIDEDQFRKESKKLAALLADPEVE 1413
            +G  S +L ++ + E  +  ES+K + L   P VE
Sbjct: 1393 NGHSSVHLFKLTVPEAIYYAESEKFSLLFNHPSVE 1427



 Score =  238 bits (608), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 169/657 (25%), Positives = 293/657 (44%), Gaps = 92/657 (14%)

Query: 1408 ADPEVEVLGWQQNAAKIGMQRCAASSQWFNERISLARYAHI------------------- 1448
            AD  +  LGWQ   A+  +    +   W N   +LA+Y  +                   
Sbjct: 1625 ADGALPPLGWQTVVARRLVNHYLSLGSWINHLTALAKYGDVPLCNLERDDPRFLIDVAYA 1684

Query: 1449 ---------LWISDDGVPDLGGTSEEDECFADE-VHQPVLTYPGAYRKVSVELKIHHLSV 1498
                     LW SD   PD  G  ++D     E V  P +  PG +  V ++L++ +L++
Sbjct: 1685 RRLQANNVVLWWSDSPRPDHAGYEKDDVAGPLERVQMPSVNNPGTFASVCIDLEVRNLAI 1744

Query: 1499 NALLKSNQVNEMEGGGLFGFDQDMNSGPYNNELCGFDETTSSAPAFRVVKQLIQRCLTDA 1558
            N +L S+ +NE+EG     F+   +     NE    D   ++A    V++++++    +A
Sbjct: 1745 NTILTSSLINELEGADSISFNPAADGAGDGNEGLFADNAFANAGVL-VLREMVKSWWAEA 1803

Query: 1559 VTSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEFRKLGATIIFA 1618
               G+  AD ++QHL RW+ SP S L+D  LH  +  + +K    L+A+FRK+G+ +I+A
Sbjct: 1804 C-KGSTMADVMVQHLVRWVESPASCLYDRALHYYVQMMSRKALLQLMADFRKVGSNVIYA 1862

Query: 1619 NFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLFMDQYNYGGIP 1678
            + +++++ T K ++  A AY   +LK+++ + LF +I+LE   +W  L++ D++NYGG  
Sbjct: 1863 SPNRLLLQTTKSEVGNAYAYAQYILKSIKGKPLFHFIDLEIKEYWDYLVWYDEFNYGG-- 1920

Query: 1679 ARADESLDDDSQ-VDIVSSWNIAEYLPKEIQDHFVLVVSEFMYIPWKHAQKLAASRASLQ 1737
                + ++ D Q + ++  W +A +LP  +Q  F   V EF+ +   H+ K    R +  
Sbjct: 1921 KACQQVVEKDEQDLQMIMHWQMATFLPVRLQPTFRDWVVEFIEL--MHSIK----RPATG 1974

Query: 1738 EGSSCTPSITVAAAENFESHIVQYVKGEI------SSYFTGKLLSIV----RDAIHHMKK 1787
               + TP +T     N  + + +   G+I            ++ S+V    R+ +H    
Sbjct: 1975 SDPTATPRLTQLPIRNGNAGLAEDAPGQIILGKAFEKPLKKEIASLVATQKRELLHPELA 2034

Query: 1788 MNNDQHNSPG----------------------VMQTAANIHKVDAPLEFIKHVCAAFALD 1825
             +    + PG                           A+ + V   LE +K +    +LD
Sbjct: 2035 ADYTFPSLPGSHLAHLTPQSSLITNTTNGNNNNNHPTASANPV---LELVKSLMQVLSLD 2091

Query: 1826 QNVQHDVLVMRKNLLKYVRVREFAPEAEFRDPCPSFILPNVICSYCNDCRDLDLCRDMAL 1885
            +N+  +  ++RK LL    VREF+ E  F++P  S  L  + C  C   RDLDLCRD  L
Sbjct: 2092 KNITLEARLLRKELLALFDVREFSKEGTFQNPSESLRLAQLSCDNCTMARDLDLCRDEDL 2151

Query: 1886 LA-----------------QDWHCAMPQCGQPYDREVMENALLQIVRQRERLYHLQDLVC 1928
            L                   DW      C   YDR  +E  LL  V      +  QDL C
Sbjct: 2152 LPPPPSSEGGGGGAGGGAAGDWSWRCLFCETEYDRNEVEERLLGEVEGLVVQWTTQDLKC 2211

Query: 1929 IRCNQVKAAHLAEQCACAGSFRCKEDASDFRSKMQIFLNIANRQGFQLLQECTSWIL 1985
             RC  ++     E C C+G ++      +   ++ ++ N+A   G ++L +    +L
Sbjct: 2212 ARCGALRVNEFMEHCTCSGEWKESVSRGEVMKRLGVYRNVAKFYGLRMLGDVVDGVL 2268


>gi|74200863|dbj|BAE24794.1| unnamed protein product [Mus musculus]
          Length = 1273

 Score = 1357 bits (3512), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 670/1215 (55%), Positives = 877/1215 (72%), Gaps = 34/1215 (2%)

Query: 25   EELEAKLGYDLFSEGDKRLGWLLTFASSSLEDEDTRKVYSCIDLYFVSQDGSTFKSKYKF 84
            ++++ + G++   E  +R GWL+    + + DED R V S +D YF+  DGS FK    +
Sbjct: 42   DKMDLRFGFERLKEPGERTGWLINMHPTEILDEDKRLV-SAVDYYFIQDDGSRFKVALPY 100

Query: 85   RPYFYAATKEKMEMDVEAYLRRRYESQIADIEILEKEDLDLKNHLSGLHKSYLKISFDTV 144
             PYFY A ++  + +V ++L ++++ +IA +E + KEDLDL NHL GL +SY+K+SF TV
Sbjct: 101  MPYFYIAARKGCDREVSSFLSKKFQGKIAKLENVPKEDLDLPNHLVGLKRSYIKLSFHTV 160

Query: 145  QQLMDVKKDLLHVVERNQAKFDAAEAYESILTG------------KREQRPQDFLDCIVD 192
            + L+ V+K++   V++N+ +  A++ Y ++L+             +  ++  D LD IVD
Sbjct: 161  EDLVKVRKEISPAVKKNREQDHASDEYTTMLSSILQGGSVITDEDETSKKIADQLDNIVD 220

Query: 193  LREYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLLE--KRVDLLQRAEVHVCAFDIETTK 250
            +REYDVPYHIR +ID  +    WY+V        +E  +R DL++R +  V AFDIETTK
Sbjct: 221  MREYDVPYHIRLSIDLRIHVAHWYNVRFRGNAFPVEITRRDDLVERPDPVVLAFDIETTK 280

Query: 251  LPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNVNNE 310
            LPLKFPDA+ D IMMISYM+DGQGYLI NRE V EDIED E+TPKPE+EG F V N  +E
Sbjct: 281  LPLKFPDAETDQIMMISYMIDGQGYLITNREIVSEDIEDFEFTPKPEYEGPFCVFNEPDE 340

Query: 311  IELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDKNQGECRA 370
            + L++ WF H+QE KP I VTYNGD+FDWPF+E RAA HG  M +E+GFQ D +QGE +A
Sbjct: 341  VHLIQRWFEHIQETKPTIMVTYNGDFFDWPFVEARAAIHGLSMYQEIGFQKD-SQGEYKA 399

Query: 371  KFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQMMASYS 430
                H+DC  WVKRDSYLP GS  LKA  KAKLGYDP+E++PEDM R A E+PQ +A+YS
Sbjct: 400  PQCIHMDCLRWVKRDSYLPVGSHNLKAAAKAKLGYDPVELDPEDMCRMATEQPQTLATYS 459

Query: 431  VSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVICPNK 490
            VSDAVATYYLYM YVHPFIF+L TIIPM PDEVLRKGSGTLCE LLMVQA+ AN+I PNK
Sbjct: 460  VSDAVATYYLYMKYVHPFIFALCTIIPMEPDEVLRKGSGTLCEALLMVQAFHANIIFPNK 519

Query: 491  HQSDPEKFYRN-HLLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQLLNNLDRDLQ 549
             + +  K   + H+L++ETY+GGHVE LESGVFRSD+P  F+++P+A++ LL  +++ ++
Sbjct: 520  QEQEFNKLTDDGHMLDAETYVGGHVEALESGVFRSDIPCRFRMNPAAFDFLLQRVEKTMR 579

Query: 550  YAIKVEGKMDLESVSNYDEVKNAIMEKLLRLQEEPIREECPLIYHLDVAAMYPNIILTNR 609
            +AI+ E K+ +E  +N+ EV   I  KL  L++ P R ECPLIYHLDV AMYPNIILTNR
Sbjct: 580  HAIEEEEKVPVEQATNFQEVCEQIKTKLTSLKDVPNRIECPLIYHLDVGAMYPNIILTNR 639

Query: 610  LQPPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYYHLKKQIESE-----F 664
            LQP +IV +  C ACDFN+PG +C RK+ W WRGE     RS+Y+ ++ Q+ESE     F
Sbjct: 640  LQPSAIVDEATCAACDFNKPGASCQRKMAWQWRGEFMPASRSEYHRIQHQLESEKFPPLF 699

Query: 665  VDGTNGHLSKSFLDLPKMEQQSRLKDRLKKYCQKAYKRVLDKPVTELREAGICMRENSFY 724
             +G     +++F +L + EQ    K RL  YC+KAYK++    V E R   IC RENSFY
Sbjct: 700  PEGP----ARAFHELSREEQAKYEKRRLADYCRKAYKKIHVTKVEE-RLTTICQRENSFY 754

Query: 725  VDTVRSFRDRRYEYKGLNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHKCILNS 784
            VDTVR+FRDRRYE+KGL+KVWK KLS A   G++ +++  ++M +LYDSLQLAHKCILNS
Sbjct: 755  VDTVRAFRDRRYEFKGLHKVWKKKLSAAVEVGDASEVKRCKNMEILYDSLQLAHKCILNS 814

Query: 785  FYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLPGSFPE 844
            FYGYVMRKGARWYSMEMAG+V +TGA II  AR LIE+IG+PLELDTDGIWCVLP SFPE
Sbjct: 815  FYGYVMRKGARWYSMEMAGIVCFTGANIITQARELIEQIGRPLELDTDGIWCVLPNSFPE 874

Query: 845  NFTFKTKDLKK-KLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEFEVD 903
            NF  KT + KK KLTISYP  MLN+ V    TN QYQ L +P S TY THSE SI FEVD
Sbjct: 875  NFVIKTTNAKKPKLTISYPGAMLNIMVKEGFTNHQYQELTEPSSLTYVTHSENSIFFEVD 934

Query: 904  GPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFL 963
            GPY AMILPASKEEG  +KKRYAVFN+DG+LAELKGFE+KRRGEL+LIK+FQ+ +F+ FL
Sbjct: 935  GPYLAMILPASKEEGKKLKKRYAVFNEDGSLAELKGFEVKRRGELQLIKIFQSSVFEAFL 994

Query: 964  HGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLADYGEQKSCAV 1023
             GST+EE Y +VA VA+ WLD+L ++  ++ DSEL + ISE+ +MS+ L DYGEQKS ++
Sbjct: 995  KGSTLEEVYGSVAKVADYWLDVLYSKAANMPDSELFELISENRSMSRKLEDYGEQKSTSI 1054

Query: 1024 TTARRLSDFLGDTMVKDKGLRCQYIVACEPQGTPVSERAVPVAIFETDAEIMKFYLRKWC 1083
            +TA+RL++FLGD MVKD GL C+YI++ +P+G+PV+ERA+P+AIF+ +  + K +LRKW 
Sbjct: 1055 STAKRLAEFLGDQMVKDAGLSCRYIISRKPEGSPVTERAIPLAIFQAEPTVRKHFLRKWL 1114

Query: 1084 KTSS--DVGIRSIVDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLYKKVREK 1141
            K+SS  D  IR+I+DW YY +RL SAIQKIITIPAA+Q+V NPVPRV HPDWL+KK+ EK
Sbjct: 1115 KSSSLQDFDIRTILDWDYYIERLGSAIQKIITIPAALQQVKNPVPRVKHPDWLHKKLLEK 1174

Query: 1142 EDKFRQRKLVDIFSSLKKDDFLNKTCNAETNLMDENVEDLED--FPKKRRNSVNGPRPIV 1199
             D ++Q+K+ ++F    K   +     A  N +     D+ED    K   ++V       
Sbjct: 1175 NDIYKQKKISELFVLEGKRQIV--MAQASENSLSLCTPDMEDIGLTKPHHSTVPVATKRK 1232

Query: 1200 RCFEVNNEQKTVKTT 1214
            R +E   E + +  T
Sbjct: 1233 RVWETQKESQDIALT 1247


>gi|194910464|ref|XP_001982152.1| GG11199 [Drosophila erecta]
 gi|190656790|gb|EDV54022.1| GG11199 [Drosophila erecta]
          Length = 2234

 Score = 1357 bits (3512), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 697/1414 (49%), Positives = 948/1414 (67%), Gaps = 62/1414 (4%)

Query: 25   EELEAKLGYDLFSEGDKRLGWLLTFASSSLEDEDTRKVYSCIDLYFVSQDGSTFKSKYKF 84
            +++++K G+D   +  +R G+L+   ++ + DED R++ + +DL+F+  DGS FK    +
Sbjct: 40   DKIDSKYGFDRVKDSQERTGYLINMHANEVLDED-RRLIAALDLFFIQMDGSRFKCTVAY 98

Query: 85   RPYFYAATKEKMEMDVEAYLRRRYESQIADIEILEKEDLDLKNHLSGLHKSYLKISFDTV 144
            +PY     ++ M ++V  +L R+Y  QI  +E + KEDLDL NHLSGL + Y+K+SF   
Sbjct: 99   QPYLLIRPEDNMHLEVARFLGRKYSGQICGLEHITKEDLDLPNHLSGLQQQYIKLSFLNQ 158

Query: 145  QQLMDVKKDLLHVVERNQAKFDAAEAYESILTGKREQ------------RPQDFLDCIVD 192
              +  V+++L+  V+RNQ +  +   Y  +L     Q            R QD++DCIVD
Sbjct: 159  TAMTKVRRELMSAVKRNQERQKSNTYYMQMLATSLAQSSAGSEDATLGKRQQDYMDCIVD 218

Query: 193  LREYDVPYHIRFAIDNDVRCGQWYDVSISSTG--PLLEKRVDLLQRAEVHVCAFDIETTK 250
            +RE+DVPYH+R +ID  + CGQWY++   S    P +  R D+L R E  V AFDIETTK
Sbjct: 219  IREHDVPYHVRVSIDLRIFCGQWYNIRCRSGVELPNITCRPDILDRPEPVVLAFDIETTK 278

Query: 251  LPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNVNNE 310
            LPLKFPDA  D +MMISYM+DGQGYLI NRE +  +++D EYTPKPEFEG F V N  NE
Sbjct: 279  LPLKFPDAQTDQVMMISYMIDGQGYLITNREIISSNVDDFEYTPKPEFEGNFIVFNEENE 338

Query: 311  IELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDKNQGECRA 370
            ++LL+ +F H+ EV+P I VTYNGD+FDWPF+ETRAA +   M +E+GF   ++ G   +
Sbjct: 339  MQLLQRFFDHIMEVRPHIIVTYNGDFFDWPFVETRAAVYDLDMKQEIGFSKLRD-GNYLS 397

Query: 371  KFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQMMASYS 430
            + A H+DC  WVKRDSYLP GSQGLKAV KAKL YDP+E++PEDM   A E+PQ++A+YS
Sbjct: 398  RPAIHMDCLCWVKRDSYLPVGSQGLKAVAKAKLRYDPVELDPEDMCLMAVEQPQVLANYS 457

Query: 431  VSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVICPNK 490
            VSDAVATYYLYM YVHPFIF+L TIIPM PDE+LRKGSGTLCE LLMV+AY A ++ PNK
Sbjct: 458  VSDAVATYYLYMKYVHPFIFALNTIIPMEPDEILRKGSGTLCETLLMVEAYHAQIVYPNK 517

Query: 491  HQSDPEKFY-RNHLLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQLLNNLDRDLQ 549
            HQS+  K     H+L+SETY+GGHVE LESGVFR+D+P  F+LDP+  +QL + +D  L+
Sbjct: 518  HQSELNKLSSEGHVLDSETYVGGHVEALESGVFRADIPCRFRLDPAMVKQLQDQVDAVLR 577

Query: 550  YAIKVEGKMDLESVSNYDEVKNAIMEKLLRLQEEPIREECPLIYHLDVAAMYPNIILTNR 609
            +AI+VE  + LE V N DEV+  I++ L  L + P R E P+IYHLDV AMYPNIILTNR
Sbjct: 578  HAIEVEEGIPLEKVLNLDEVRQEIVQGLQGLHDIPNRLEQPVIYHLDVGAMYPNIILTNR 637

Query: 610  LQPPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYYHLKKQIESE-FVDGT 668
            LQP ++V+D  C ACDFN+PG  C R ++W+WRGE+    R+++  +++Q+E+E F    
Sbjct: 638  LQPSAMVSDLDCAACDFNKPGVRCKRSMDWLWRGEMLPASRNEFQRIQQQLETEKFPPLF 697

Query: 669  NGHLSKSFLDLPKMEQQSRLKDRLKKYCQKAYKRV-LDKPVTELREAGICMRENSFYVDT 727
             G   ++F +L K +Q +  K RL  YC+KAYK+  L K   E R + IC +ENSFYVDT
Sbjct: 698  PGGPQRAFHELSKEDQAAYEKKRLTDYCRKAYKKTKLTK--LETRTSTICQKENSFYVDT 755

Query: 728  VRSFRDRRYEYKGLNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHKCILNSFYG 787
            VR+FRDRRYEYKGL KV K  ++ A ASG++ +I+ A+   VLYDSLQLAHKCILNSFYG
Sbjct: 756  VRAFRDRRYEYKGLTKVAKASVNAAVASGDAAEIKAAKGREVLYDSLQLAHKCILNSFYG 815

Query: 788  YVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLPGSFPENFT 847
            YVMR+GARW+SM MAG+V  TG+ II  AR +IE++G+PLELDTDGIWC+LPGSFP+ FT
Sbjct: 816  YVMRRGARWHSMPMAGIVCLTGSNIITKAREIIERVGRPLELDTDGIWCILPGSFPQEFT 875

Query: 848  FKTK-DLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKT---YETHSECSIEFEVD 903
              T  + KKK+ ISYP  +LN  V  + TNDQY  L          Y+   E SI FEVD
Sbjct: 876  IHTSHEKKKKINISYPNAVLNTMVKDHFTNDQYHELRKDKENNLPKYDVRDENSIFFEVD 935

Query: 904  GPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFL 963
            GPY AM+LPA+KEEG  +KKRYAVFN DG+LAELKGFE+KRRGEL+LIK FQ+ +F+ FL
Sbjct: 936  GPYLAMVLPAAKEEGKKLKKRYAVFNFDGSLAELKGFEVKRRGELQLIKNFQSSVFEAFL 995

Query: 964  HGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLADYGEQKSCAV 1023
             GST+EECY++VA VA+ WLD+L ++G ++ DSEL + ISE+ +MSK L +YG QKS ++
Sbjct: 996  AGSTLEECYASVAKVADYWLDVLYSRGSNLPDSELFELISENKSMSKKLEEYGAQKSTSI 1055

Query: 1024 TTARRLSDFLGDTMVKDKGLRCQYIVACEPQGTPVSERAVPVAIFETDAEIMKFYLRKWC 1083
            +TA+RL++FLG+ MVKD GL C+YI++ +P+G PV+ERA+P+AIF+++  + + +LR+W 
Sbjct: 1056 STAKRLAEFLGEQMVKDAGLACKYIISKKPEGAPVTERAIPLAIFQSEPSVRRHHLRRWL 1115

Query: 1084 K--TSSDVGIRSIVDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLYKKVREK 1141
            K  T  D  IR ++DW+YY +RL   IQKIITIPAA+Q ++NPVPRV HPDWL+KK+ EK
Sbjct: 1116 KDNTMGDADIRDVLDWNYYIERLGGTIQKIITIPAALQGLANPVPRVQHPDWLHKKMLEK 1175

Query: 1142 EDKFRQRKLVDIFSSLKKDDFLNKTCNAETNLMDENVEDLEDFPKKRRNSVNGPRPIVRC 1201
             D  +QR++ ++F+S  K   L           ++ + D+ED   K         PIV  
Sbjct: 1176 NDVLKQRRINEMFTSRPKPKPLATE--------EDKLADMEDLAGKDGGEGAAGCPIV-- 1225

Query: 1202 FEVNNEQKTVKTTDQVDSLRQQLEPSEVSDQQPSSQNAIDTENIDRIVDYKGWLELKKRK 1261
                 ++K V+       L +  EP   + +Q         E    IV+   W+  +K+K
Sbjct: 1226 ----TKRKRVQ-------LEENDEPQATTWRQALGAPPPIGETRKTIVE---WVRFQKKK 1271

Query: 1262 WKDNLDRRKKQKLGSLRASHQANGVSESLGDMINHKEAQRRTGVGSYFRRQETAMTRCHW 1321
            WK   D+R++ +  S R   +   V  + G             +G + RR +  +    W
Sbjct: 1272 WKWQQDQRQRNRQASKRTRGEDPPVVRATGSTAT---------LGGFLRRAQRTLLDQPW 1322

Query: 1322 QIIQLVPSSQSGVFLAWVVVEGIMVRIPITVPRLFYLN--SKDPIVEKFPGRRVNKTLPH 1379
            QI+QLVP    G F  W ++   + +I +TVPR+FY+N  S  P  E    R+VN+ LP 
Sbjct: 1323 QIVQLVPIDDLGHFTVWALIGEELHKIKLTVPRIFYVNQRSAAPPEEGQLWRKVNRVLPR 1382

Query: 1380 GRRSFNLIEVMIDEDQFRKESKKLAALLADPEVE 1413
             R  FNL    + E  FR  S  + A LA P++E
Sbjct: 1383 SRPVFNLYRYSVPEQLFRDNSLGMLADLATPDIE 1416



 Score =  265 bits (678), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 182/603 (30%), Positives = 289/603 (47%), Gaps = 123/603 (20%)

Query: 1442 LARYAHILWISDDGVPDLGGTSEEDECFADEVHQP---VLTYPGAYRKVSVELKIHHLSV 1498
            L R+  +LW S    PDLGG   +D     E  +    V    G Y  V VEL +  L+V
Sbjct: 1680 LQRHNFVLWWSASTRPDLGGREADDSRLLAEFEESISVVQNKAGFYPDVCVELALDSLAV 1739

Query: 1499 NALLKSNQVNEMEGGG-LFGFD-------QDMNSGPYNNELCGFDETTSSAPAFRVVKQL 1550
            +ALL+S ++ EMEG      FD       ++M        L  +DET   + AFRV++ +
Sbjct: 1740 SALLQSTRIQEMEGASSAITFDVMPQASLEEMIGTVPAATLPSYDETALCSAAFRVMRSM 1799

Query: 1551 IQRCLTDAVTSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEFRK 1610
            +   L +   + N+F+D  + H YRW+ S ++ L+DP L R L+ +M+K+F  ++AEF++
Sbjct: 1800 VNGWLREVSINRNIFSDFQIVHFYRWVRSSNALLYDPALRRSLNNLMRKMFLRIIAEFKR 1859

Query: 1611 LGATIIFANFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLFMD 1670
            LGATI++A+F+++I+ +GK  +S A  Y D ++++L+ +E+F  I+L     W+ +L+MD
Sbjct: 1860 LGATIVYADFNRIILSSGKKTVSDALGYVDYIVQSLRNKEMFHSIQLSFEQCWNFMLWMD 1919

Query: 1671 QYNYGGI------------------------------------------PARADESLDDD 1688
            Q N+ GI                                          PA ++E   D 
Sbjct: 1920 QANFSGIRGKLPKGIDETVSSIVSTTMIRDSERDQDDEEDEEEDSENRDPAESNEPEQDQ 1979

Query: 1689 SQVDIVS---SWNIAEYLP--KEIQDHFVLVVSEFMYIPWKHAQKLAASRAS---LQEGS 1740
             Q D +S   +W I E+LP   E ++ F  +++ FM       Q LA  + +   +++ S
Sbjct: 1980 DQEDELSLELNWTIGEHLPDENECREKFESLLTLFM-------QSLAEKKTTEQAIKDIS 2032

Query: 1741 SCTPSITVAAAENFESHIVQYVKGEISSYFTGKLLSIVRDAIHHMKKMNNDQHNSPGVMQ 1800
             C     +   +N       Y KG+                             SPG   
Sbjct: 2033 HCAFDFILKLHKN-------YGKGK----------------------------PSPG--- 2054

Query: 1801 TAANIHKVDAPLEFIKHVCAAFALDQNVQHDVLVMRKNLLKYVRVREFAPEAEFRDPCPS 1860
                       LE I+ +  A ++D+ +   +  +R+N+L+ V + EF+  AE+ DPC S
Sbjct: 2055 -----------LELIRTLIKALSVDKTLAEQINELRRNMLRLVGIGEFSDLAEWEDPCDS 2103

Query: 1861 FILPNVICSYCNDCRDLDLCRDMALLAQD----WHCAMPQCGQPYDREVMENALLQIVRQ 1916
             I+  VIC  CN CRDLDLC+D     +D    W CA  QC   YD E +E  +L  +++
Sbjct: 2104 HIINEVICKACNHCRDLDLCKDKHRAMKDGVPVWLCA--QCYVAYDNEEIEMRMLDALQR 2161

Query: 1917 RERLYHLQDLVCIRCNQVKAAHLAEQCACAGSFRCKEDASDFRSKMQIFLNIANRQGFQL 1976
            +   Y LQDL C RC+++K  +LAE C CAG+F       D ++ +  F  +A     QL
Sbjct: 2162 KMMSYVLQDLRCSRCSEIKRENLAEFCTCAGNFVPLISGKDIQTLLSTFNKVAGNHKMQL 2221

Query: 1977 LQE 1979
            LQ+
Sbjct: 2222 LQQ 2224


>gi|195391332|ref|XP_002054314.1| GJ24376 [Drosophila virilis]
 gi|194152400|gb|EDW67834.1| GJ24376 [Drosophila virilis]
          Length = 2259

 Score = 1357 bits (3512), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 697/1421 (49%), Positives = 958/1421 (67%), Gaps = 58/1421 (4%)

Query: 25   EELEAKLGYDLFSEGDKRLGWLLTFASSSLEDEDTRKVYSCIDLYFVSQDGSTFKSKYKF 84
            +++++K G+D   +  +R G+L+   ++ + D+D R++ + +DL+F+  DGS FK    +
Sbjct: 40   DKIDSKYGFDRVKDSQERTGYLINMHTNEVLDDD-RRLVAALDLFFIQMDGSRFKCTVAY 98

Query: 85   RPYFYAATKEKMEMDVEAYLRRRYESQIADIEILEKEDLDLKNHLSGLHKSYLKISFDTV 144
            +PY     +  M ++V  +L R+Y  QIA +E + KEDLDL NHLSGL + YLK+SF   
Sbjct: 99   KPYLLIRPEVNMHLEVARFLGRKYSGQIASLEHINKEDLDLANHLSGLQQHYLKLSFLNQ 158

Query: 145  QQLMDVKKDLLHVVERNQAKFDAAEAYESILTGKREQ-----------RPQDFLDCIVDL 193
              +  V+++L+  V RN  +  +   Y  +L     Q           R QD++DCI+D+
Sbjct: 159  TAMTKVRRELMAAVRRNTEREKSNTYYMQMLANSLAQSASGSDDGSGKRQQDYMDCIMDI 218

Query: 194  REYDVPYHIRFAIDNDVRCGQWYDVSISSTG--PLLEKRVDLLQRAEVHVCAFDIETTKL 251
            RE+DVPYH+R +ID  + CGQWY++   S    P++  R D+L R E  V AFDIETTKL
Sbjct: 219  REHDVPYHVRVSIDLRIFCGQWYNIRCRSGVELPVITCRPDILDRPEPVVLAFDIETTKL 278

Query: 252  PLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNVNNEI 311
            PLKFPDA  D IMMISYM+DGQGYLI NRE +  +IED EYTPKPEFEG F + N  NE+
Sbjct: 279  PLKFPDAQTDQIMMISYMIDGQGYLITNREIISSNIEDFEYTPKPEFEGNFIIFNEENEM 338

Query: 312  ELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDKNQGECRAK 371
            +LL+ +F H+ EV+P I VTYNGD+FDWPF+ETRAA +   M +E+GF   ++ G   ++
Sbjct: 339  QLLQKFFDHIMEVRPHIVVTYNGDFFDWPFVETRAAVYDLDMKQEIGFSKMRD-GIYLSR 397

Query: 372  FACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQMMASYSV 431
             + H+DC  WVKRDSYLP GSQGLKAV KAKL YDP+E++PEDM R A E+PQ++++YSV
Sbjct: 398  PSIHMDCLCWVKRDSYLPVGSQGLKAVAKAKLRYDPVELDPEDMCRMAVEEPQVLSNYSV 457

Query: 432  SDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVICPNKH 491
            SDAVATYYLYM YVHPFIF+L TIIPM PDE+LRKGSGTLCE LLMVQAY AN++ PNKH
Sbjct: 458  SDAVATYYLYMKYVHPFIFALNTIIPMEPDEILRKGSGTLCETLLMVQAYHANIVFPNKH 517

Query: 492  QSDPEKFYR-NHLLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQLLNNLDRDLQY 550
            QS+  K     H+L+SETY+GGHVE LESGVFR+D+P  F+LDP+  +QL++ +D  L++
Sbjct: 518  QSELNKLSNEGHVLDSETYVGGHVEALESGVFRADIPCRFRLDPNMVKQLMDQVDAVLKH 577

Query: 551  AIKVEGKMDLESVSNYDEVKNAIMEKLLRLQEEPIREECPLIYHLDVAAMYPNIILTNRL 610
            AI+VE  + L+ VSN DEVK  I++ L  L + P R E P+IYHLDV AMYPNIILTNRL
Sbjct: 578  AIEVEESIPLQLVSNLDEVKQEIVQALQGLHDIPNRLEQPVIYHLDVGAMYPNIILTNRL 637

Query: 611  QPPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYYHLKKQIESE-FVDGTN 669
            QP ++VT+  C ACDFN+PG  C R ++W+WRGE+    R+++  +++Q+E+E F     
Sbjct: 638  QPSAMVTELDCAACDFNKPGVRCKRSMDWLWRGEMLPASRNEFQRIQQQLETEKFPPLFP 697

Query: 670  GHLSKSFLDLPKMEQQSRLKDRLKKYCQKAYKRVLDKPVTELREAGICMRENSFYVDTVR 729
            G  +++F +L K +Q +  K RL  YC+KAYK+     + E R + IC +ENSFYVDTVR
Sbjct: 698  GGPARAFHELSKEDQAAYEKKRLSDYCRKAYKKTKITKL-ETRNSTICQKENSFYVDTVR 756

Query: 730  SFRDRRYEYKGLNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHKCILNSFYGYV 789
            +FRDRRYEYKGL K  K  ++ A ASG++ +I+ A+   VLYDSLQLAHKCILNSFYGYV
Sbjct: 757  AFRDRRYEYKGLTKTAKASVNAAIASGDAAEIKAAKGREVLYDSLQLAHKCILNSFYGYV 816

Query: 790  MRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLPGSFPENFTFK 849
            MR+GARW+SM MAG+V  TG+ II  AR +IE++G+PLELDTDGIWC+LPGSFP+ FT  
Sbjct: 817  MRRGARWHSMPMAGIVCLTGSNIITKAREIIERVGRPLELDTDGIWCILPGSFPQEFTVH 876

Query: 850  TK-DLKKKLTISYPCVMLNVDVARNNTNDQYQTLV-----DPVSKTYETHSECSIEFEVD 903
            T  + KKK+ ISYP  +LN  V  + TNDQY  L      +P S  Y+   E SI FEVD
Sbjct: 877  TTHEKKKKINISYPNAVLNTMVKDHFTNDQYHELRKAEKGEPPS--YDIRDENSIFFEVD 934

Query: 904  GPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFL 963
            GPY AM+LPA+KEEG  +KKRYAVFN DGTLAELKGFE+KRRGEL+LIK FQ+ +F+ FL
Sbjct: 935  GPYLAMVLPAAKEEGKKLKKRYAVFNFDGTLAELKGFEVKRRGELQLIKNFQSSVFEAFL 994

Query: 964  HGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLADYGEQKSCAV 1023
             GST+EECY++VA VA+ WLD+L ++G ++ DSEL + I+E+ +MSK L +YG QKS ++
Sbjct: 995  AGSTLEECYASVAKVADYWLDVLYSRGSNLPDSELFELIAENKSMSKKLEEYGAQKSTSI 1054

Query: 1024 TTARRLSDFLGDTMVKDKGLRCQYIVACEPQGTPVSERAVPVAIFETDAEIMKFYLRKWC 1083
            +TA+RL++FLG+ MVKD GL C+YI++ +P+G PV+ERAVP+AIF+++  + + +LR+W 
Sbjct: 1055 STAKRLAEFLGEQMVKDAGLACKYIISKKPEGAPVTERAVPLAIFQSEPSVRRHHLRRWL 1114

Query: 1084 K--TSSDVGIRSIVDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLYKKVREK 1141
            K  T  D  IR ++DW+YY +RL   IQKIITIPAA+Q ++NPVPRV HPDWL+KK+ EK
Sbjct: 1115 KDNTMGDADIRDVLDWNYYIERLGGTIQKIITIPAALQGLANPVPRVQHPDWLHKKMLEK 1174

Query: 1142 EDKFRQRKLVDIFSSLKKDDFLNKTCNAETNLMDENVEDLEDFPKKRRNSVNGPRPI--- 1198
             D  +QR++ ++F+S  +      T + +  L      D+ED   K     +G RPI   
Sbjct: 1175 NDVLKQRRINEMFTSRPRPKPALATEDKQLEL-----GDMEDLAGKEDAEASG-RPIVTK 1228

Query: 1199 ---VRCFEVNNEQKTVKTTDQVDSLRQQL-EPSEVSDQQPSSQNAIDTENIDRIVDYKGW 1254
               V   + + E    ++T Q  + RQ L  P  + + + +            IV+   W
Sbjct: 1229 RKRVHLDDDDEEGNAAESTPQPKTWRQALGAPPAIGETRKT------------IVE---W 1273

Query: 1255 LELKKRKWKDNLDRRKKQKLGSLRASHQANGVSESLGDMINHKEAQRRTGVGSYFRRQET 1314
            +  +KRKW    ++R++ +  S R  +     + +       +       +G + RR + 
Sbjct: 1274 VRFQKRKWAWQQEQRQRCRQQSKRQRNGTETAAGAASAQAAARATTSAATLGGFLRRAQR 1333

Query: 1315 AMTRCHWQIIQLVPSSQSGVFLAWVVVEGIMVRIPITVPRLFYLN--SKDPIVEKFPGRR 1372
             +    WQI+QLVP +  G F  W ++   + RI +TVPR+FY+N  S  P  E    R+
Sbjct: 1334 TLLDQPWQILQLVPVNDLGQFTVWALIGEELHRIKLTVPRIFYVNQRSAAPPEEGQLWRK 1393

Query: 1373 VNKTLPHGRRSFNLIEVMIDEDQFRKESKKLAALLADPEVE 1413
            V++ LP  R  +NL    + E  FR     + A LA P++E
Sbjct: 1394 VHRVLPRSRPVYNLYRYSVPEQLFRDNCLGMLADLATPDIE 1434



 Score =  265 bits (676), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 170/581 (29%), Positives = 285/581 (49%), Gaps = 73/581 (12%)

Query: 1442 LARYAHILWISDDGVPDLGGTSEEDECFADEVHQPVLTY---PGAYRKVSVELKIHHLSV 1498
            L ++  +LW S    PDLGG   +D     E  + +       G Y  V VEL +  L+V
Sbjct: 1699 LQKHNFVLWWSASTRPDLGGREADDSRLLAEFEESITVVQNRAGFYSDVCVELALDSLAV 1758

Query: 1499 NALLKSNQVNEMEGGG-LFGFD-------QDMNSGPYNNELCGFDETTSSAPAFRVVKQL 1550
            +ALL+SN++ EMEG      FD       ++M        L  +DET   + AFRV++ +
Sbjct: 1759 SALLQSNRIQEMEGASSAITFDVMPQASLEEMIGTVPAATLPSYDETALCSAAFRVMRSM 1818

Query: 1551 IQRCLTDAVTSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEFRK 1610
            +   L +   + N+F+D  + H YRW+ S ++ L+DP L R L+ +M+K+F  ++AEF++
Sbjct: 1819 VNGWLREVSINQNIFSDFQIVHFYRWVRSSNALLYDPALRRSLNNLMRKMFLRIIAEFKR 1878

Query: 1611 LGATIIFANFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLFMD 1670
            LGATI++A+F+++II +GK ++  A  Y D ++++L+ +E+F  I+L     W+ +L++D
Sbjct: 1879 LGATIVYADFNRIIISSGKRNVPDALGYVDYIVQSLRNKEMFHSIQLSFEQCWNFMLWLD 1938

Query: 1671 QYNYGGIPARADESLDDDSQVDIVSSWNIAEYLPKEIQDHFVLVVSEFMYIPWKHAQKLA 1730
            Q N+ GI  R  + +D+      V S  + +   +  Q H      E         Q++ 
Sbjct: 1939 QSNFSGIRGRLPKGIDETVSAIAVGSTTLRQSQARNEQVH------EDDDDDNDDVQEVE 1992

Query: 1731 ASRA------------------------SLQEGSSCTPSITVAAAENFESHIVQYVKGEI 1766
            A                            L E + C         E FES +  +++   
Sbjct: 1993 AGLDEPLEEQEEEEEEELSLELNWTIGEQLPEENECR--------EKFESLLTLFMQALA 2044

Query: 1767 SSYFTGKLLSIVR----DAIHHMKKMNNDQHNSPGVMQTAANIHKVDAPLEFIKHVCAAF 1822
                T + +  +     D +  + K       SPG              L+ I+ +    
Sbjct: 2045 ERKTTEQAIKDISHCAFDFVLKLHKNYGKGKPSPG--------------LDLIRTIVKVL 2090

Query: 1823 ALDQNVQHDVLVMRKNLLKYVRVREFAPEAEFRDPCPSFILPNVICSYCNDCRDLDLCRD 1882
            ++D+ +   +  +R+N+L+ V V EF+  A++ DPC ++I+  VIC  CN CRDLDLC+D
Sbjct: 2091 SVDKALADQINELRRNMLRLVGVGEFSDLADWTDPCDTYIINEVICKACNHCRDLDLCKD 2150

Query: 1883 MALLAQD----WHCAMPQCGQPYDREVMENALLQIVRQRERLYHLQDLVCIRCNQVKAAH 1938
                 +D    W CA  QC   YD E +E  ++  ++++   + LQDL C RCN++K  +
Sbjct: 2151 KHRAMKDGIPVWLCA--QCYVAYDNEEIETRMIDALQRKMMSFVLQDLRCERCNEIKREN 2208

Query: 1939 LAEQCACAGSFRCKEDASDFRSKMQIFLNIANRQGFQLLQE 1979
            LAE C CAG+F       +  + ++ F N+A     QLLQ+
Sbjct: 2209 LAEFCTCAGNFLPLISGKEIETLLKTFSNVAGYHKMQLLQQ 2249


>gi|392562527|gb|EIW55707.1| DUF1744-domain-containing protein [Trametes versicolor FP-101664 SS1]
          Length = 2241

 Score = 1356 bits (3509), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 698/1444 (48%), Positives = 933/1444 (64%), Gaps = 109/1444 (7%)

Query: 7    DRQDGRRTKKQKLIRSAEEELEAKLGYDLFSEGDKRLGWLLTFASSSLEDEDTRKVYSCI 66
            D +  + T++ + +++  +E++ KLG+    EG  R GWL+    + ++D D     + +
Sbjct: 55   DEEGNQLTERFEQVKT-NDEVDEKLGFARVQEGPLREGWLINMHPTLMKDADWPGGKAAV 113

Query: 67   DLYFVSQDGSTFKSKYKFRPYFYAATKEKMEMDVEAYLRRRYESQIADIEILEKEDLDLK 126
            D YF+  DG  FK   ++ PYFY A K  ME  +E +L ++YE  I  I    KEDL + 
Sbjct: 114  DFYFIQDDGGMFKCTLQYEPYFYIACKSGMETVIEEWLLKKYEGAICRITRERKEDLQMP 173

Query: 127  NHLSGLHKSYLKISFDTVQQLMDVKKDLLHVVERNQAKFDAAEAY--------------- 171
            NHL G  + YL++ F  V  L+ V++D++ +   N AK DA +AY               
Sbjct: 174  NHLMGHTRLYLQLHFRNVSDLLTVRRDIMPLALANSAKLDAVDAYAEVVNATAAAATNIE 233

Query: 172  ------------ESILTGKREQRPQDFLDCIVDLREYDVPYHIRFAIDNDVRCGQWYDVS 219
                         S  TG R+Q P++    I+D+REYDVPY++R A+DND+R G WY VS
Sbjct: 234  LEGEWAAGVGGGSSRRTGVRDQDPRE---GIIDIREYDVPYYLRVAMDNDIRVGLWYAVS 290

Query: 220  ISSTGPLLEKRVDLLQRAEVHVCAFDIETTKLPLKFPDADYDIIMMISYMLDGQGYLIIN 279
             ++  P  +   + ++RA+  V A+DIETTK PLKFPD   D +MMISYM+DGQG+LI N
Sbjct: 291  FTAGQPGFKLLTERVKRADPVVMAYDIETTKAPLKFPDQAIDQVMMISYMIDGQGFLITN 350

Query: 280  RECVGEDIEDLEYTPKPEFEGYFKVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDW 339
            RE V EDI+D EYTPK  +EG F V N  +E  ++R WF+H+Q+VKP +  T+NGD+FD+
Sbjct: 351  REIVSEDIDDFEYTPKEGYEGPFTVFNEPDEAAVIRRWFSHIQDVKPTVMATFNGDFFDF 410

Query: 340  PFLETRAAHHGFKMSEELGFQCDKNQGECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVT 399
            PF+  RA  HG  M  E+GF  D ++ E + +   H+DCF WVKRDSYLPQGSQGLKAVT
Sbjct: 411  PFVAARAKVHGIDMFLEIGFAID-SEDEYKCRSCVHMDCFRWVKRDSYLPQGSQGLKAVT 469

Query: 400  KAKLGYDPLEVNPEDMVRFAKEKPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMS 459
             AKLGY+P+E++PE M  +A E PQ++A YSVSDAVATYYLYM Y+HPFIFSL  IIP+ 
Sbjct: 470  TAKLGYNPIELDPELMTPYAIEHPQILAQYSVSDAVATYYLYMKYLHPFIFSLCNIIPLC 529

Query: 460  PDEVLRKGSGTLCEMLLMVQAYKANVICPNKHQSDPEKFYRNHLLESETYIGGHVECLES 519
            PDEVLRKG+GTLCE LLMV+A++  +I PN+H+      Y  HLL SETY+GGHVE LE+
Sbjct: 530  PDEVLRKGTGTLCETLLMVEAFRGQIIMPNRHEESHGNMYDGHLLASETYVGGHVEALEA 589

Query: 520  GVFRSDLPTSFKLDPSAYEQLLNNLDRDLQYAIKVEGKMDLESVSNYDEVKNAIMEKLLR 579
            GVFRSD+ T FK++PSA ++L+++LD  L + I  E K  LE+V+NYDEVK A+  KL  
Sbjct: 590  GVFRSDIETHFKIEPSAVQKLIDDLDAALTFCIVEESKSSLEAVTNYDEVKAAVQAKLEV 649

Query: 580  LQEEPIREECPLIYHLDVAAMYPNIILTNRLQPPSIVTDEVCTACDFNRPGKTCLRKLEW 639
            +++ P R + PLIYHLDVAAMYPNI+L+NRLQP S+V +  C  CDFNRPGK C RKL+W
Sbjct: 650  MRDNPQRMDQPLIYHLDVAAMYPNIMLSNRLQPDSVVNEATCAVCDFNRPGKECDRKLQW 709

Query: 640  VWRGEIFMGKRSDYYHLKKQIESE-FVDGTNGHLSKSFLDLPKMEQQSRLKDRLKKYCQK 698
             WRGE F  +R ++  +K  +  E F     G   + F DLP+ EQ + L  RL  Y ++
Sbjct: 710  AWRGEFFPARRDEFNMIKHALNQESFPPKKPGGPQRKFNDLPQAEQTALLHKRLGDYSRR 769

Query: 699  AYKRVLDKPVTELREAGICMRENSFYVDTVRSFRDRRYEYKGLNKVWKGKLSEAKASGNS 758
             YK++ D  + E REA IC REN FY+DTVR FRDRRYEYKGL+K WK  L        S
Sbjct: 770  VYKKIKDTKI-ETREAIICQRENPFYIDTVRRFRDRRYEYKGLHKTWKKNLDVVVGEQRS 828

Query: 759  I-KIQEAQDMVVLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNAR 817
            I ++ EA+ M+VLYDSLQLAHKCILNSFYGYVMRKGARW+SMEMAG+   TGAKIIQ AR
Sbjct: 829  IAEVDEAKKMIVLYDSLQLAHKCILNSFYGYVMRKGARWHSMEMAGITCLTGAKIIQMAR 888

Query: 818  LLIEKIGKPLELDTDGIWCVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTND 877
             L+E+IG+PLELDTDGIWC+LPG FPENF FK  +  K L  SYPC MLN  V    TN 
Sbjct: 889  QLVEQIGRPLELDTDGIWCMLPGVFPENFKFKLAN-GKALAFSYPCTMLNHLVHAEFTNH 947

Query: 878  QYQTLVDPVSKTYETHSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAEL 937
            QY  L DP +  Y  HSE SI FE+DGPYKAMILP+SKEE  L+KKRYAVFNDDG+LAEL
Sbjct: 948  QYHEL-DPEAGEYMVHSENSIFFELDGPYKAMILPSSKEEDKLLKKRYAVFNDDGSLAEL 1006

Query: 938  KGFEIKRRGELKLIKVFQAELFDKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSE 997
            KGFE+KRRGEL+LIK+FQ+++F+KFL GST++ECY+AVA VA+RWLD+L +   D++D E
Sbjct: 1007 KGFEVKRRGELQLIKIFQSQIFEKFLLGSTLDECYAAVAQVADRWLDVLFSHADDLSDEE 1066

Query: 998  LIDYISESSTMSKSLADYGEQKSCAVTTARRLSDFLGDTMVKDKGLRCQYIVACEPQGTP 1057
            L++ I+E+ +MSK+LA+YG QKS +++TARRL++FLGD MVKDKGL C++I++ +P G P
Sbjct: 1067 LVELIAENRSMSKTLAEYGGQKSTSISTARRLAEFLGDQMVKDKGLACKFIISSKPMGAP 1126

Query: 1058 VSERAVPVAIFETDAEIMKFYLRKWCKTSS--DVGIRSIVDWSYYKQRLSSAIQKIITIP 1115
            V+ERAVPVAIF  +  + + YLRKW K +S  +  +RSI+DW YY +RL S IQK+ITIP
Sbjct: 1127 VTERAVPVAIFSAEESVKRTYLRKWLKDNSLTNFELRSILDWDYYIERLGSVIQKLITIP 1186

Query: 1116 AAMQKVSNPVPRVVHPDWLYKKVREKEDKFRQRKLVDIFSSLKKDDFLNKTCNAETNLMD 1175
            AAMQKV+NPVPR+ HPDWL+++V   +DKF Q K+ D F +  K              + 
Sbjct: 1187 AAMQKVTNPVPRIRHPDWLFRRVAALDDKFHQHKVTDFFKAAPKP-------------VA 1233

Query: 1176 ENVEDLEDFPKKRRNSVNGPRPIVRCFEVNNEQKTVKTTDQVDSLRQQLEPSEVSDQQPS 1235
             +  D+ED    +R   + PR             TV    Q    R+Q  P E    +  
Sbjct: 1234 SDSMDIED-TMTQRTQDSAPR-----------LATVYRKSQ----RRQETPEETPADKLL 1277

Query: 1236 SQNAIDTENIDRIVDYKGWLELKKRKWKDNLDRRKKQKLGSLRASHQANGVSESLGDMIN 1295
            ++   D         Y  WL++ KR+W                 SH+   +S   GD   
Sbjct: 1278 AEPLPDVHK-----SYSKWLKVMKRRW-----------------SHRRGDIS---GD--- 1309

Query: 1296 HKEAQRRTGVGSYFRRQETAMTRCHWQIIQLVPSSQSGVFLAWVVVEGIMVRIPITVPRL 1355
                   T + S FR   T  +  HW I+Q+ P+   G F  W+ V+G +  +P+ +PR 
Sbjct: 1310 ------GTVMPSMFRGVRTKQS-THWDIVQIRPNRTPGRFTLWLSVDGTLSAVPLRIPRE 1362

Query: 1356 FYLNSKDPIVEK------FPGRRVNKTLPHGRRSFNLIEVMIDEDQFRKESKKLAALLAD 1409
            FY++ + P  E       +   +V ++LP  R+  NL ++ + ED +    +    +  D
Sbjct: 1363 FYMHLRTPPKEDQFNHEMYQCEKVVRSLPRDRQCVNLYKITVREDLYVDGQEHFIDITND 1422

Query: 1410 PEVE 1413
            P V+
Sbjct: 1423 PNVD 1426



 Score =  288 bits (737), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 188/623 (30%), Positives = 319/623 (51%), Gaps = 56/623 (8%)

Query: 1412 VEVLGWQQNAAKIGMQRCAASSQWFNERISLARY-----AHI------------------ 1448
            ++V  WQ + A+  + R  +  +W +  ++ A Y      HI                  
Sbjct: 1623 LDVFPWQTSVAQKLVSRYLSLGKWLDTAMAQADYYDIPVGHIEGDKPLLLADVEFARRLM 1682

Query: 1449 -----LWISDDGVPDLGGTSEEDECFADEVHQPVLTYPGAYRKVSVELKIHHLSVNALLK 1503
                 LW S    PDLGG  EED    +E+ +   T PG Y  V +E+ + +L+V+A+L 
Sbjct: 1683 SQDVVLWWSPGDRPDLGGI-EEDNRPQEELAKTEFTSPGCYSNVCLEITVRNLAVDAVLH 1741

Query: 1504 SNQVNEMEG-GGLFGFDQDMNSGPYNN----ELCGFDETTSSAPAFRVVKQLIQRCLTDA 1558
            S  VNE+EG GG   FD       Y+     +     E+  S  AF ++K L++  + D 
Sbjct: 1742 SVIVNELEGSGGATAFDASRTLDEYSKGDAMQDLTLGESNVSPLAFSILKSLVKTWMLDK 1801

Query: 1559 VTSGNVFADA--ILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEFRKLGATII 1616
            +  GN  + A  +L H +RW+ S  S ++D  +HR +H +M+K F  +LAEF++LG+ ++
Sbjct: 1802 I-QGNFQSPATTVLDHFWRWISSTASHMYDTSIHRFIHGLMRKTFIQMLAEFKRLGSHVV 1860

Query: 1617 FANFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLFMDQYNYGG 1676
            +A+ S++++ T K     A AY   +  A+ + ELF+ + L    F+  L+FMD+ NYG 
Sbjct: 1861 YADLSRILLVTSK-PPGTAHAYATYITTAVTSHELFQHVYLHTERFYDFLIFMDEANYGA 1919

Query: 1677 IPARADESLDDDSQVDIVSSWNIAEYLPKEIQDHFVLVVSEFMYIPWKHAQKL-AASRAS 1735
            +      +++   ++ I   WNI  +LP  IQ  F  +V  F+   ++ +QK   A+R  
Sbjct: 1920 VVCENPLAIEPPEELAIEMRWNIQSFLPPAIQSDFRALVRYFLVEFFRTSQKCKGATRVP 1979

Query: 1736 LQEGSSCTPSITV--AAAENFESHIVQYVKGEI---SSYFTGKLLSIVRDAIHHMKKMNN 1790
            L+   +  P  T       N  S   ++V+ ++   +    G +L   RDA+        
Sbjct: 1980 LRALQNAAPDATQLDVTKANEISACREFVQRKLIRRTLRMLGAVLDRHRDALTSEDPSAL 2039

Query: 1791 DQHNSPGVMQTAANIHKVDAPLEFIKHVCAAFALDQNVQHDVLVMRKNLLKYVRVREFAP 1850
             Q + P  +   +++H  +  LEF K  CA FAL +    +V +++++LL+ V VREFAP
Sbjct: 2040 VQWDFP--VLPGSHLHLTNPGLEFAKFACAVFALAKEHTLEVGLLKRSLLELVGVREFAP 2097

Query: 1851 EAEFRDPCPSFILPNVICSYCNDCRDLDLCRDMALL--AQD------WHCAMPQCGQPYD 1902
            EA F++PC    L +V C +C+  +D D CRD ALL  A+D      W CA  +C   YD
Sbjct: 2098 EASFQNPCEPLKLASVPCQHCDAMKDFDFCRDPALLPSARDPAAGARWLCA--RCDCEYD 2155

Query: 1903 REVMENALLQIVRQRERLYHLQDLVCIRCNQVKAAHLAEQCACAGSFRCKEDASDFRSKM 1962
            R  +E AL+++V   ER +  QDL C RC Q+++ ++A+ C C+G+++   + ++ + ++
Sbjct: 2156 RTAIEFALVRMVGDAERRFAQQDLRCSRCAQLRSDNVAKHCGCSGNYQLTMNKAEVKRRL 2215

Query: 1963 QIFLNIANRQGFQLLQECTSWIL 1985
            +  +N+A       L+E    +L
Sbjct: 2216 RTIVNVALAHNMGRLKEVAQTLL 2238


>gi|350400852|ref|XP_003485984.1| PREDICTED: DNA polymerase epsilon catalytic subunit A-like [Bombus
            impatiens]
          Length = 2267

 Score = 1355 bits (3506), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 699/1420 (49%), Positives = 959/1420 (67%), Gaps = 72/1420 (5%)

Query: 27   LEAKLGYDLFSEGDKRLGWLLTFASSSLEDEDTRKVYSCIDLYFVSQDGSTFKSKYKFRP 86
            ++   G+   ++  +R G+L+   ++ + + D R + S +D YF+ +D + FK  Y + P
Sbjct: 46   IDGLYGFHRVTDTKERTGFLINMHATEIMENDKR-LMSGVDYYFLEEDCTRFKISYPYNP 104

Query: 87   YFYAATKEKMEMDVEAYLRRRYESQIADIEILEKEDLDLKNHLSGLHKSYLKISFDTVQQ 146
            YFY   K+    +V   L ++Y + I  ++ + KEDLDL NHL GL + YLKISF     
Sbjct: 105  YFYILCKKDTYEEVSTGLNKKYTNLIHKVQTIYKEDLDLSNHLIGLKQKYLKISFINTVD 164

Query: 147  LMDVKKDLLHVVERNQAKFDAAEAYESIL---------TGKREQRPQDFLDCIVDLREYD 197
            L  V++ ++  V+ N+ +      Y ++L         TG  +++  DF+D I+D+REYD
Sbjct: 165  LNKVRRGIMKAVKLNKEREKHNTYYSNMLSDVLNTEQGTGDIKKQTIDFMDNILDIREYD 224

Query: 198  VPYHIRFAIDNDVRCGQWYDVSISSTG-PLLEKRVDLLQRAEVHVCAFDIETTKLPLKFP 256
            VP+H+R +ID  + CG WY V       P + KR DL++  +  V A+DIETTKLPLKFP
Sbjct: 225  VPHHVRVSIDMKICCGNWYSVKTRGNDIPTITKRDDLIEPPDPIVLAYDIETTKLPLKFP 284

Query: 257  DADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNVNNEIELLRL 316
            DAD D IMMISYM+DGQGYLI NRE +  DIE+ EYTPKPEFEG+F V N  NE   ++ 
Sbjct: 285  DADTDQIMMISYMIDGQGYLITNREIIANDIENFEYTPKPEFEGFFTVFNEPNEKATIKR 344

Query: 317  WFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDKNQGECRAKFACHL 376
            +F H+ +++P I+VTYNGD+FDWPF+ETRAA H   M + +GF  +++ G   ++ A H+
Sbjct: 345  FFDHINDIRPHIFVTYNGDFFDWPFVETRAAFHNMDMKDRIGFSKNRD-GVYSSRPAMHM 403

Query: 377  DCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQMMASYSVSDAVA 436
            DC  WV+RDSYLP GSQ LKAV KAKL Y+P+E++PEDM R A E P+ +A+YSVSDAVA
Sbjct: 404  DCLCWVRRDSYLPVGSQNLKAVAKAKLRYNPVELDPEDMCRLASEDPETLANYSVSDAVA 463

Query: 437  TYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVICPNKHQSDPE 496
            TYYLY  YVHPFIF+L TIIPM PDEVLRKGSGTLCE LLMVQA++AN+I PNK + +  
Sbjct: 464  TYYLYYKYVHPFIFALCTIIPMEPDEVLRKGSGTLCESLLMVQAFQANIIFPNKQEQEFN 523

Query: 497  KFYRN-HLLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQLLNNLDRDLQYAIKVE 555
            KF ++ HLL+ ETY+GGHVE LESGVFR+D+P  FK+ PSA E+L+N ++  L++AI+ E
Sbjct: 524  KFTKDGHLLDQETYVGGHVEALESGVFRADIPCRFKIVPSAVEELINGVESALKHAIQEE 583

Query: 556  GKMDLESVSNYDEVKNAIMEKLLRLQEEPIREECPLIYHLDVAAMYPNIILTNRLQPPSI 615
             K+ +E V+N++EV   I  KL  L+ +P+R E P+IYHLDV AMYPNIILTNRLQP ++
Sbjct: 584  EKVPMEMVTNFEEVVEEITVKLEGLRNQPLRLENPVIYHLDVGAMYPNIILTNRLQPSAM 643

Query: 616  VTDEVCTACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYYHLKKQIESE-FVDGTNGHLSK 674
            V + VC AC++N+PG  C RK+EW+WRGE F    S+Y  +++Q+E+E F     G   +
Sbjct: 644  VDETVCAACNYNKPGALCQRKMEWMWRGEYFTATLSEYQRMQQQLENEKFPPQFPGGARR 703

Query: 675  SFLDLPKMEQQSRLKDRLKKYCQKAYKRVLDKPVTELREAGICMRENSFYVDTVRSFRDR 734
            ++ +L K EQ S  K RL +YC+KAYK+V    + E R   IC +ENSFYVDTVR+FRDR
Sbjct: 704  AYHELSKEEQVSYEKKRLTEYCKKAYKKVKITSMEE-RTQTICQKENSFYVDTVRAFRDR 762

Query: 735  RYEYKGLNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHKCILNSFYGYVMRKGA 794
            RYEYK L KV K +++ A A G++  I+ A++  VLYDSLQLAHKCILNSFYGYVMRKG+
Sbjct: 763  RYEYKALTKVAKQEVAAAVAKGDAADIKSAKNREVLYDSLQLAHKCILNSFYGYVMRKGS 822

Query: 795  RWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLPGSFPENFTFKTKD-L 853
            RW+SMEM G+V YTGA II  AR +IE++G+PLELDTDGIWCVLP SFP+N    T    
Sbjct: 823  RWFSMEMGGIVCYTGAHIIMRAREIIEQVGRPLELDTDGIWCVLPASFPDNVVVHTTHPK 882

Query: 854  KKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEFEVDGPYKAMILPA 913
            KKKL +SYP  +LN  V    TND Y  LVDP + TY+  SE SI FEVDGPY AM+LPA
Sbjct: 883  KKKLVVSYPNAVLNFMVKDQFTNDVYHELVDPENLTYKIKSENSIFFEVDGPYLAMVLPA 942

Query: 914  SKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFLHGSTIEECYS 973
            +KEEG  +KKRYAVFN DG+LAELKGFE+KRRGEL+LIKVFQ  +F+ FL GST+EECY+
Sbjct: 943  AKEEGKKLKKRYAVFNFDGSLAELKGFEVKRRGELQLIKVFQTSVFESFLKGSTLEECYA 1002

Query: 974  AVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLADYGEQKSCAVTTARRLSDFL 1033
            +VA  A+ WLD+L ++  D+ DSEL + ISE+ +MS+ L +YG QKS +++TA+RL++FL
Sbjct: 1003 SVAKDADYWLDILYSKCADMPDSELFELISENKSMSRKLEEYGSQKSTSISTAKRLAEFL 1062

Query: 1034 GDTMVKDKGLRCQYIVACEPQGTPVSERAVPVAIFETDAEIMKFYLRKWCKTSS--DVGI 1091
            GD M+KD GL C+YI+A +PQG PV+ERA+P+AIF+++  I K+YLRKW K SS     I
Sbjct: 1063 GDQMIKDAGLACKYIIANKPQGAPVTERAIPLAIFQSEPAIRKYYLRKWLKDSSLQSDDI 1122

Query: 1092 RSIVDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLYKKVREKEDKFRQRKLV 1151
            R I+DWSYY +RL SAIQKIITIPAAMQ +SNPVPRV HPDWL+K+V EK    +Q+K+ 
Sbjct: 1123 RDILDWSYYIERLGSAIQKIITIPAAMQGLSNPVPRVKHPDWLHKRVMEKSATHKQKKIT 1182

Query: 1152 DIFSSLKKDDFLNKTCNAETNLMDENVE-----DLEDFPKKRRNSVNGPRPIVRCFEVNN 1206
            D+F+ + KD         E N+ ++++E     D+ED   K   S     PIV      N
Sbjct: 1183 DMFTMMPKD--------KEKNIGNQDIESSETCDIEDIAGKPSTSKQS-LPIV------N 1227

Query: 1207 EQKTVKTTDQVDSLRQQLEPSEVSDQQPS------SQNAIDTENIDRIVDYKGWLELKKR 1260
            ++K           RQ LE +E  +   S      S   + T   +R+     WLE  K+
Sbjct: 1228 KRK-----------RQFLEGNEAENANKSWKEVLGSPPPMGTTKEERL----KWLEFHKQ 1272

Query: 1261 KWKDNLDRRK--KQKLGSLRASHQANGVSESLGDMINHKEAQRRTGVGSYFRRQETAMTR 1318
            KW     +R   ++   S R+++  + VS  +    N       + +G +F+R +  +  
Sbjct: 1273 KWAHQAKQRAEYQKSKKSKRSNNDGDEVSWGVARDTN------TSTLGGFFKRTQRKLLM 1326

Query: 1319 CHWQIIQLVPSSQSGVFLAWVVVEGIMVRIPITVPRLFYLNSKDPIVEKFPGRRVN---- 1374
              WQIIQ+ P+++ G++  WV+V+  + ++ + +PR+FY+N++ P     PG++V+    
Sbjct: 1327 NPWQIIQISPTNKPGLYRLWVLVDRDLHQLRLIIPRIFYVNTRKPKPNPEPGKKVSWKES 1386

Query: 1375 -KTLPHGRRSFNLIEVMIDEDQFRKESKKLAALLADPEVE 1413
             K LP  R  +NL +  + E QF+  S++L   ++ PE+E
Sbjct: 1387 KKVLPRSRPIYNLYQYTVPETQFQLYSQELLEDMSRPEIE 1426



 Score =  308 bits (788), Expect = 3e-80,   Method: Compositional matrix adjust.
 Identities = 182/578 (31%), Positives = 299/578 (51%), Gaps = 46/578 (7%)

Query: 1442 LARYAHILWISDDGVPDLGGTSEEDECFA---DEVHQPVLTYPGAYRKVSVELKIHHLSV 1498
            L +   +LW S    PDLGG+  +D       +E         G Y  V +EL+I  L+V
Sbjct: 1684 LQKNNFVLWCSPTEKPDLGGSENDDNRLLTDYEESLHSAANNAGTYSSVCIELEIESLAV 1743

Query: 1499 NALLKSNQVNEMEGGGLF-GFD-------QDMNS-GPYNNELCGFDETTSSAPAFRVVKQ 1549
            N LL+ + +++++G   F  F        QDM +     N +  +DET   +PAFR+++ 
Sbjct: 1744 NTLLQHHHIHDIDGTSNFVAFHTQQQTSVQDMATHDGMTNIIPNYDETVLCSPAFRILRN 1803

Query: 1550 LIQRCLTDAVTSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEFR 1609
            ++   L D     N+FAD  + H YRWL SP S L+DP L R LH  M+K+FA LLAEF+
Sbjct: 1804 MVNTWLLDVSVHKNIFADYQIIHFYRWLRSPSSLLYDPALKRTLHTYMKKLFAQLLAEFK 1863

Query: 1610 KLGATIIFANFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLFM 1669
             LG+ IIFANF+K+II T K  +S A  Y + +++ ++ +ELF  IE+     W  L ++
Sbjct: 1864 NLGSIIIFANFNKIIICTKKRTMSDALNYMEFVVQTIRDKELFHSIEITFEQCWEYLTWL 1923

Query: 1670 DQYNYGGIPARADESL-------------DDDSQVDIVSSWNIAEYLPKEI--QDHFVLV 1714
            D +NYGGI  +  + +             ++D + +IV +WN+ E LPKE   Q  F  +
Sbjct: 1924 DVHNYGGIKGKLPKDIENITDTNSENAEDENDGEPEIVMNWNLMECLPKEAACQSSFTAI 1983

Query: 1715 VSEFMYIPWKH---------AQKLAASRASLQEGSSCTPSITVAAAENFESHIVQYVKGE 1765
            ++ + +  ++           +    +  S    +  T  + + + EN      + +KG+
Sbjct: 1984 IAGYFHAIYQFILENELNTTVRPRNLNNLSQLSHNCTTAQLGLGSLENTAEFAKKLIKGD 2043

Query: 1766 ISSYFTGKLLSIVRDAIHHMKKMNNDQHNSPGVMQTAANIHKVDAPLEFIKHVCAAFALD 1825
            +S     KL  IV+    ++ +        P +     +  K++  LE IK VC   +LD
Sbjct: 2044 MSQ----KLFQIVQKIHKNLPEKTLTIEECPNLDLDGKDSKKINPALELIKSVCKVLSLD 2099

Query: 1826 QNVQHDVLVMRKNLLKYVRVREFAPEAEFRDPCPSFILPNVICSYCNDCRDLDLCRD-MA 1884
              V+++V  +R N+LK +RV  F+   +++DPC S I+P +IC  CN  RD+DLC+D   
Sbjct: 2100 AEVENEVYYLRTNMLKLIRVGSFSDLVDWKDPCISLIVPEIICKVCNHTRDIDLCKDNFC 2159

Query: 1885 LLAQD---WHCAMPQCGQPYDREVMENALLQIVRQRERLYHLQDLVCIRCNQVKAAHLAE 1941
             + +D   W C  P C   YD + +E  L+ ++  +   Y LQDL C +CN++K  ++ E
Sbjct: 2160 TMDRDRYIWKC--PLCKMDYDNDEIEFLLMDMLNHKSMAYMLQDLQCCKCNEIKRENMNE 2217

Query: 1942 QCACAGSFRCKEDASDFRSKMQIFLNIANRQGFQLLQE 1979
             C+C+G+F+     S+    M+I  ++A +   + L E
Sbjct: 2218 LCSCSGNFKTLIPKSEIEKFMKICKSVAIKSNMKTLLE 2255


>gi|258566263|ref|XP_002583876.1| DNA polymerase epsilon [Uncinocarpus reesii 1704]
 gi|237907577|gb|EEP81978.1| DNA polymerase epsilon [Uncinocarpus reesii 1704]
          Length = 2144

 Score = 1355 bits (3506), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 697/1382 (50%), Positives = 921/1382 (66%), Gaps = 78/1382 (5%)

Query: 57   EDTRKVYSCIDLYFVSQDGSTFKSKYKFRPYFYAATKEKMEMDVEAYLRRRYESQIADIE 116
            ED++   + ++ YF+  DG  FK+  ++ PYF  A K   E +VE + RR++E  + D +
Sbjct: 7    EDSKGGRAGVEFYFLGDDGDNFKATVEYDPYFLIAIKRGYEAEVEEWCRRKFEGLVKDAK 66

Query: 117  ILEKEDLDLKNHLSGLHKSYLKISFDTVQQLMDVKKDLLHVVERNQAKFDAAEAYESILT 176
             +EKEDL + NHL G  + +L++SF  V  L+ V+  LL + E+N+   +A + Y  + +
Sbjct: 67   QVEKEDLQMPNHLLGHKRRFLQLSFANVNDLLAVRSTLLPIAEKNKKNVNAMDTYAEMAS 126

Query: 177  ------------GKREQRPQDFLDC---IVDLREYDVPYHIRFAIDNDVRCGQWYDVSIS 221
                        G    R   +L+    IVD+REYDVPYH+R AID D+R G+WY V  +
Sbjct: 127  ASAGFDIIDEEDGANRSR-NAYLEASEYIVDIREYDVPYHVRVAIDKDIRIGRWYTVDAT 185

Query: 222  STGPLLEKRVDLLQRAEVHVCAFDIETTKLPLKFPDADYDIIMMISYMLDGQGYLIINRE 281
                 L    + LQRA+  V AFDIETTKLPLKFPD   D IMMISYM+DG+GYLI NRE
Sbjct: 186  HGAISLTCIEERLQRADPVVLAFDIETTKLPLKFPDPVIDQIMMISYMIDGRGYLITNRE 245

Query: 282  CVGEDIEDLEYTPKPEFEGYFKVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPF 341
             V EDI D EYTPKPE+EG F + N ++E  ++  +F H+++ KP +  TYNGD+FDW F
Sbjct: 246  IVSEDISDFEYTPKPEYEGPFTIFNESDEKGVIERFFQHVKDAKPTVIATYNGDFFDWSF 305

Query: 342  LETRAAHHGFKMSEELGFQCDKNQGEC-RAKFACHLDCFAWVKRDSYLPQGSQGLKAVTK 400
            +E RA+  G  M  E+GF+  KN  +  ++ +  H+DCFAWV RDSYLPQGS+GLKAVT 
Sbjct: 306  VEARASVLGIDMYREIGFR--KNSEDIYQSDYCVHMDCFAWVNRDSYLPQGSRGLKAVTV 363

Query: 401  AKLGYDPLEVNPEDMVRFAKEKPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSP 460
            AKLGYDP E++PE M R+A E+PQ +A YSVSDAVATYYLYM YVHPFIFSL TIIP+SP
Sbjct: 364  AKLGYDPDELDPEVMTRYASERPQTLAEYSVSDAVATYYLYMKYVHPFIFSLCTIIPLSP 423

Query: 461  DEVLRKGSGTLCEMLLMVQAYKANVICPNKHQSDPEKFYRNHLLESETYIGGHVECLESG 520
            D+VLRKG+GTLCEMLLMVQAYK N++ PNKH+   E F+  HLL+SETY+GGHVE +E+G
Sbjct: 424  DDVLRKGTGTLCEMLLMVQAYKNNIVLPNKHKDPVEAFWDGHLLDSETYVGGHVESIEAG 483

Query: 521  VFRSDLPTSFKLDPSAYEQLLNNLDRDLQYAIKVEGKMDLESVSNYDEVKNAIMEKLLRL 580
            VFRSD+P +F +D +A ++LL +LD  L ++I VE K  LE V+NY++VK  I E+LL L
Sbjct: 484  VFRSDIPVNFSIDTTAVDELLRDLDAALTFSITVEEKKSLEDVTNYEDVKAQIAERLLNL 543

Query: 581  QEEPIREECPLIYHLDVAAMYPNIILTNRLQPPSIVTDEVCTACDFNRPGKTCLRKLEWV 640
            ++ P R E P IYHLDVA+MYPNI+ TNRLQP S++ +  C  CDFNRPGKTC R+L W 
Sbjct: 544  RDTPNRLERPSIYHLDVASMYPNIMTTNRLQPDSMIQESDCAVCDFNRPGKTCDRRLPWA 603

Query: 641  WRGEIFMGKRSDYYHLKKQIESE-FVDGTNGHLSKSFLDLPKMEQQSRLKDRLKKYCQKA 699
            WRGE    KR +Y  +++ + +E F   T     ++F DL + EQ   ++ RL++Y +K 
Sbjct: 604  WRGEFLPAKRDEYNMIRRAVANEKFPGRTRDAPLRAFDDLGEAEQAKIIRSRLQEYSKKI 663

Query: 700  YKRVLDKPVTELREAGICMRENSFYVDTVRSFRDRRYEYKGLNKVWKGKLSEAKASGNS- 758
            Y ++ D    E REA IC REN FYVDTVR+FRDRRY++KG  KVWKGK+   K SG + 
Sbjct: 664  YHKIHDSKTIE-REAIICQRENPFYVDTVRNFRDRRYDFKGQQKVWKGKVDALKGSGATP 722

Query: 759  IKIQEAQDMVVLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARL 818
             +I EA+ MV+L+DSLQLAHK ILNSFYGYVMRKG+RWYSMEMAGV   TGA IIQ AR 
Sbjct: 723  AEIDEAKKMVILFDSLQLAHKVILNSFYGYVMRKGSRWYSMEMAGVTCLTGAHIIQMARE 782

Query: 819  LIEKIGKPLELDTDGIWCVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQ 878
            L+E+IG+PLELDTDGIWC+LP +FPENF F  K+  KK+ ISYPCVMLN  V    TN Q
Sbjct: 783  LVERIGRPLELDTDGIWCMLPATFPENFAFTLKN-GKKMAISYPCVMLNHLVHGRFTNHQ 841

Query: 879  YQTLVDPVSKTYETHSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELK 938
            YQTLVDP +  YETHS+ SI FEVDGPYKAMILP SKEE   +KKRYAVFN DG+LAELK
Sbjct: 842  YQTLVDPHTFRYETHSDNSIFFEVDGPYKAMILPTSKEEDKNLKKRYAVFNHDGSLAELK 901

Query: 939  GFEIKRRGELKLIKVFQAELFDKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSEL 998
            GFE+KRRGELKLIK+FQ ++F  FL G+T++E Y+AVA VANRWLD+L   G  +AD EL
Sbjct: 902  GFEVKRRGELKLIKIFQTQIFKFFLEGTTLQETYAAVAEVANRWLDVLHLHGSTLADEEL 961

Query: 999  IDYISESSTMSKSLADYGEQKSCAVTTARRLSDFLGDTMVKDKGLRCQYIVACEPQGTPV 1058
            ID I E+ +M+K+L +YG QKS ++TTARRL++FLGD MVKDKGL C+YI++  P+ +  
Sbjct: 962  IDLICENRSMTKTLEEYGSQKSTSITTARRLAEFLGDQMVKDKGLNCKYIISAAPKNSST 1021

Query: 1059 SERAVPVAIFETDAEIMKFYLRKWCKTS-SDVGIRSIVDWSYYKQRLSSAIQKIITIPAA 1117
            +ERA+PVAIF  +  + +F+LRKW K    D+  RSI+DW YY +RL S IQK+ITIPAA
Sbjct: 1022 TERAIPVAIFSAEPSVKRFFLRKWLKEDPGDMDPRSIIDWGYYLERLGSVIQKLITIPAA 1081

Query: 1118 MQKVSNPVPRVVHPDWLYKKVREKEDKFRQRKLVDIFSSLKKDDFLNKTCNAETNLMDEN 1177
            +QKV NPVPRV HPDWL +++  K+DKF+Q+K+ D+F             NA TNL+D  
Sbjct: 1082 LQKVRNPVPRVAHPDWLQRRINIKDDKFKQKKMTDLFGKA-------PLSNASTNLLDHR 1134

Query: 1178 VEDLEDFPKKRRNSVNGPRPIVRCFEVNNEQKTVKTTDQVDSLRQQLEPSEVSDQQPSSQ 1237
            +                  PI    E     + ++ + Q+   R+  E S+ +D   S  
Sbjct: 1135 L------------------PIAGDIEDAISTQKLRMSTQISQKRKAPESSQSADPFASLP 1176

Query: 1238 NAIDTENIDRIVDYKGWLELKKRKWK-DNLDRRKKQKLGSLRASHQANGVSESLGDMINH 1296
              + + N     DY+GWL+ +K+KWK     R +++KL   R     + +S         
Sbjct: 1177 AKMPSIN----EDYEGWLKYQKQKWKIQKHARLRRRKLFGERTVAATDSLS--------- 1223

Query: 1297 KEAQRRTGVGSYFRRQETAMTRCHWQIIQLVPSSQSGVFLAWVVVEGIMVRIPITVPRLF 1356
                      ++FR Q        WQI+Q   +   G   A+V+++  +  I I VPR  
Sbjct: 1224 ----------NFFRNQAELTYVSTWQILQFRETDIRGEVRAFVLIDRKIHAIIIKVPRQL 1273

Query: 1357 YLNSKD---PIV--EKFPGRRVNKTLPHGRRSFNLIEVMIDEDQFRKESKKLAALLADPE 1411
            ++N K+   P V  E    ++VN TLP+G  S +L ++ + E  + K+SK ++ALL    
Sbjct: 1274 FINFKNDNLPNVDIEGCTVQKVNHTLPNGHPSVHLFQLTMPEHTYVKDSKTISALLDHSS 1333

Query: 1412 VE 1413
            VE
Sbjct: 1334 VE 1335



 Score =  251 bits (642), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 166/621 (26%), Positives = 295/621 (47%), Gaps = 53/621 (8%)

Query: 1408 ADPEVEVLGWQQNAAKIGMQRCAASSQWFNERISLARYAHI------------------- 1448
            +D E+  LGWQ   AK  +    A   W N  I  ARY  +                   
Sbjct: 1531 SDNELPPLGWQPFLAKQIVMHYLALDSWLNHLIEFARYGDVPLCNLERDDPKFLIDIAYA 1590

Query: 1449 ---------LWISDDGVPDLGGTSEED-ECFADEVHQPVLTYPGAYRKVSVELKIHHLSV 1498
                     LW S D +PD  G  ++  +    +V  P +  PGAY  V ++L + +L++
Sbjct: 1591 RRLEKNNVVLWWSPDPLPDHAGYEKDSLDRLMQKVDMPSINNPGAYSSVCIDLDVRNLAI 1650

Query: 1499 NALLKSNQVNEMEGGGLFGFDQDMNSGPYNNELCG--FDETTSSAPAFRVVKQLIQRCLT 1556
            N +L S+ +NE+EG      +    +G   ++  G  + +T  S+    V++ +++   +
Sbjct: 1651 NTILTSSLINELEGSESVLLNPSAPNGNAISDGTGVLYSDTAFSSTGIIVLRDMVKAWWS 1710

Query: 1557 DAVTSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEFRKLGATII 1616
            +A   G V AD ++QHL RW+ SP   L+D  LH+ +  + +K    L+ +FR++G+++I
Sbjct: 1711 EAC-QGKVMADVMVQHLIRWVESPDCHLYDHALHQYVQMMSKKALQQLIGDFRRVGSSVI 1769

Query: 1617 FANFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLFMDQYNYGG 1676
            FA+ +++++ T K ++  A AY   +LK+++ + LF +++LE   +W  LL+ D++N+GG
Sbjct: 1770 FASPNRLLLQTTKTEVGNAYAYSQYILKSIKAKPLFNFLDLEIKEYWEYLLWYDEFNFGG 1829

Query: 1677 IPARADESLDDDSQ-VDIVSSWNIAEYLPKEIQDHFVLVVSEFMYIPWKHAQKLAASRAS 1735
                  E ++ ++Q ++ +  W +  +LP  ++  F   V E  YI   H  K ++    
Sbjct: 1830 --KACHEVVESNNQELETIMHWQMGGFLPTPLKPIFNDWVVE--YIEIMHGLKKSSKSVD 1885

Query: 1736 LQEGSSCTPSI-TVAAAENFESHIVQYVKGEISSYFTGKLLSIVR----DAIHHMKKMNN 1790
              E         ++   E FE  I   +    S     ++  ++R    + +H     + 
Sbjct: 1886 PDEARPTQIQFKSLTETEGFE--ITNVLSESYSKALKRQITGLIRRQRDEMLHPELASDY 1943

Query: 1791 DQHNSPGVMQTAANIHKVDAPLEFIKHVCAAFALDQNVQHDVLVMRKNLLKYVRVREFAP 1850
            +    PG         + +  LE +K++     L +    +V V+R+ LL    ++EF+ 
Sbjct: 1944 EFPTVPGAYWHDTERQR-NPTLELVKYLMHVLGLSRYTSLEVRVLRRELLALFDIKEFSN 2002

Query: 1851 EAEFRDPCPSFILPNVICSYCNDCRDLDLCRDMALLAQD------WHCAMPQCGQPYDRE 1904
              +F +P  S  LP VIC++C   RDLDLCRD  LL ++      W C    CG  Y+R 
Sbjct: 2003 AGKFENPSASLKLPQVICNHCTMTRDLDLCRDGDLLPEEGGSVKPWCCLF--CGTEYNRL 2060

Query: 1905 VMENALLQIVRQRERLYHLQDLVCIRCNQVKAAHLAEQCACAGSFRCKEDASDFRSKMQI 1964
             +E  ++  V+     +  QDL C +C  +    L E C+C GS+    D      K++I
Sbjct: 2061 ALEEKMVGEVQGLVVEWQTQDLKCAKCAGIMINPLMEHCSCGGSWTTMLDRRSTERKLRI 2120

Query: 1965 FLNIANRQGFQLLQECTSWIL 1985
            F ++A   G ++L   T+ IL
Sbjct: 2121 FQSVAKFYGLKMLTIVTNDIL 2141


>gi|389644818|ref|XP_003720041.1| DNA polymerase epsilon catalytic subunit A [Magnaporthe oryzae 70-15]
 gi|351639810|gb|EHA47674.1| DNA polymerase epsilon catalytic subunit A [Magnaporthe oryzae 70-15]
 gi|440470600|gb|ELQ39662.1| DNA polymerase epsilon catalytic subunit A [Magnaporthe oryzae Y34]
 gi|440479022|gb|ELQ59814.1| DNA polymerase epsilon catalytic subunit A [Magnaporthe oryzae P131]
          Length = 2240

 Score = 1353 bits (3503), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 695/1416 (49%), Positives = 940/1416 (66%), Gaps = 73/1416 (5%)

Query: 26   ELEAKLGYDLFSEGDKRLGWLLTFASSSLEDEDT--RKVYSCIDLYFVSQDGSTFKSKYK 83
            +++  +G+  +  G KR GWL+   S+S+ED+        + +D YF+ +DG TFK+  +
Sbjct: 56   DIDENMGFGRYDAGRKREGWLVNVQSTSIEDDRVPGGGGRAALDCYFIEEDGGTFKATVQ 115

Query: 84   FRPYFYAATKEKMEMDVEAYLRRRYESQIAD-IEILEKEDLDLKNHLSGLHKSYLKISFD 142
            + PYF  A ++  E +VE + +R     +   +  +EKEDL + NHL G  +++L++SF 
Sbjct: 116  YDPYFLVAVRKGHEGEVEEWCKRVPGGGVVKKVRRIEKEDLKMPNHLLGYRRTFLELSFA 175

Query: 143  TVQQLMDVKKDLLHVVERNQAKFDAAEAYESILTGKR------------EQRPQ----DF 186
             VQ LM  +KD++ + ERN+   DA + Y  +                 E+R      D 
Sbjct: 176  NVQNLMAARKDIMPIAERNKKNMDAMDTYAEVAATNGDFDLFDDDLRNDEKRHNASFADA 235

Query: 187  LDCIVDLREYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLLEKRVDLLQRAEVHVCAFDI 246
             D +VD+REYDVPYH+R  ID ++R G+WY V        +    + L  A+  V A+DI
Sbjct: 236  SDFLVDIREYDVPYHVRVMIDLNIRVGKWYWVEAKHGVTSIVCNEEHLVMADPVVMAYDI 295

Query: 247  ETTKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTN 306
            ETTKLPLKFPDA  D +MMISYM+DGQG+LI NRE + EDI D EYTPKPE+ G F + N
Sbjct: 296  ETTKLPLKFPDAAIDQVMMISYMIDGQGFLITNREVISEDIADFEYTPKPEYPGPFMIFN 355

Query: 307  VNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDKNQG 366
              +E  LL  +F H++E +P +  TYNGD+FDWPF++ RA+ +G  M  E+G++ D +  
Sbjct: 356  EPDEKALLERFFLHIKEARPTVIATYNGDFFDWPFVDARASFNGIDMYREIGWRKDTDD- 414

Query: 367  ECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQMM 426
            + +  ++ H+DCF WV RDSYLPQGS+GLKAVT AKLGYDP E++PE M  +A+E+PQ +
Sbjct: 415  QYKCNYSVHMDCFHWVNRDSYLPQGSRGLKAVTVAKLGYDPDELDPELMTPYAQERPQTL 474

Query: 427  ASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVI 486
            A YSVSDAVATYYLYM YVHPFIFSL TI+P+ PD+  RKG+GTLCEMLLMVQAY+ N++
Sbjct: 475  AEYSVSDAVATYYLYMKYVHPFIFSLCTILPLGPDDTERKGTGTLCEMLLMVQAYQKNIV 534

Query: 487  CPNKHQSDPEKFYRNHLLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQLLNNLDR 546
             PNKH S  E F+  HLL+SETY+GGHVE +E+GVFR+D+P +F +DPSA ++L+ +LD 
Sbjct: 535  LPNKHMSPKESFWEGHLLDSETYVGGHVESIEAGVFRADIPVNFAVDPSACDELIRDLDA 594

Query: 547  DLQYAIKVEGKMDLESVSNYDEVKNAIMEKLLRLQEEPIREECPLIYHLDVAAMYPNIIL 606
             L+++I VE K D++ V+NY+EV++ I  KLL L++ P R+E PLIYHLDVA+MYPNI+ 
Sbjct: 595  ALKFSITVEEKKDMDDVTNYEEVRDQIKAKLLALRDTPNRQERPLIYHLDVASMYPNIMT 654

Query: 607  TNRLQPPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYYHLKKQIESEFVD 666
            TNRLQP S++++  C ACDFNRPGKTC R+L W WRGE    KR +Y  ++  +E+E   
Sbjct: 655  TNRLQPDSMISEADCAACDFNRPGKTCDRRLPWAWRGEYLPAKRDEYNMIRNALENERFP 714

Query: 667  G--TNGHLSKSFLDLPKMEQQSRLKDRLKKYCQKAYKRVLDKPVTELREAGICMRENSFY 724
            G   N  + ++F +LP  EQ + ++ RL+ Y QK Y ++ D   T++REA IC REN FY
Sbjct: 715  GKWPNSPM-RTFQELPADEQANLVRKRLQLYSQKVYHKIHDS-TTKVREAIICQRENPFY 772

Query: 725  VDTVRSFRDRRYEYKGLNKVWKGKLSEAKASGN-SIKIQEAQDMVVLYDSLQLAHKCILN 783
            +DTVR FRDRRY+YKG  KVWKGK    K+SG    ++  A+ M++L+DSLQLAHK ILN
Sbjct: 773  IDTVRDFRDRRYDYKGKAKVWKGKTDALKSSGAPGSEVDAAKKMIILFDSLQLAHKVILN 832

Query: 784  SFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLPGSFP 843
            SFYGYVMRKG+RWYSMEMAGV   TGA IIQ A+ L+E++G+PLELDTDGIWC+LP +FP
Sbjct: 833  SFYGYVMRKGSRWYSMEMAGVTCLTGATIIQLAKELVERLGRPLELDTDGIWCMLPATFP 892

Query: 844  ENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEFEVD 903
            ENF FK K+  KKL ISYPCVMLN  V    TN QYQTLVD  +  YETHS+ SI FEVD
Sbjct: 893  ENFAFKLKN-GKKLAISYPCVMLNHLVHAKFTNHQYQTLVDADTFKYETHSDNSIFFEVD 951

Query: 904  GPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFL 963
            GPYKAM+LP SKEE   +KKRYAVFNDDG+LAELKGFE+KRRGELKLIK+FQ ++F  FL
Sbjct: 952  GPYKAMVLPTSKEEDKNLKKRYAVFNDDGSLAELKGFEVKRRGELKLIKIFQQQIFKFFL 1011

Query: 964  HGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLADYGEQKSCAV 1023
             G T+ ECYSAVA VANRWLD+LDN+G  +AD EL+D ISE+ +MSK+L +YG QKS ++
Sbjct: 1012 EGETLAECYSAVAKVANRWLDVLDNKGTTLADEELMDLISENRSMSKTLEEYGSQKSTSI 1071

Query: 1024 TTARRLSDFLGDTMVKDKGLRCQYIVACEPQGTPVSERAVPVAIFETDAEIMKFYLRKWC 1083
            TTA+RL+DFLG+ MVKDKGL C++I+   P+G PV+ERAVPVAIF  D +  + YL+KW 
Sbjct: 1072 TTAKRLADFLGEQMVKDKGLNCKFIICARPKGAPVTERAVPVAIFSADEDTKRLYLKKWL 1131

Query: 1084 KTS-SDVGIRSIVDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLYKKVREKE 1142
            K    D   R+++DW+YY +RL S IQK+ITIPAA+QKV NPVPRV HPDWL +++  K+
Sbjct: 1132 KEEPQDTDPRALLDWAYYAERLGSVIQKLITIPAALQKVRNPVPRVPHPDWLQRRINAKD 1191

Query: 1143 DKFRQRKLVDIFSSLKKDDFLNKTCNAETNLMDENVEDLEDFPKKRRNSVNGPRPIVRCF 1202
            DK +Q+K+ D+F+S              TN+    + DLEDF     N +  P+ +    
Sbjct: 1192 DKMKQKKMTDLFAS-------KGPLEDITNISSSRLNDLEDF----GNKLLQPKTVDAAI 1240

Query: 1203 EVNNEQKTVKTTDQVDSLRQQLEPSEVSDQQPSSQNAIDTENIDRIVDYKGWLELKKRKW 1262
              + +  T K        R++ EP+  +D   S    +     D   DY  +L+ +K KW
Sbjct: 1241 TASQKVSTSK--------RKEPEPAVPADPFASLPKVMP----DPSKDYPAFLQYQKLKW 1288

Query: 1263 KDNLDRRKKQKLGSLRASHQANGVSESLGDMINHKEAQRRTGVGSYFRRQETAMTRCHWQ 1322
                   K QK   +R  H           +   +       +   FR Q     R  WQ
Sbjct: 1289 -------KLQKQARIRRRH-----------LFGDRRGNANNNIQQTFRNQAEITFRNTWQ 1330

Query: 1323 IIQLVPSSQSGVFLAWVVVEGIMVRIPITVPRLFYLNSK-----DPIVEKFPGRRVNKTL 1377
            ++QL  +   G+  A+V+++  +  + I VPR  +LN K     D  VE     +V+ TL
Sbjct: 1331 LLQLKLTDNPGIVSAYVLIDNKIHSVKIKVPRQVFLNLKSRELPDVEVEGCQVEQVSHTL 1390

Query: 1378 PHGRRSFNLIEVMIDEDQFRKESKKLAALLADPEVE 1413
            P+G  S +L ++++DE+ +  ES+K + L   P VE
Sbjct: 1391 PNGHSSVHLFKLVVDEEVYFAESEKFSLLFNHPSVE 1426



 Score =  269 bits (687), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 170/618 (27%), Positives = 299/618 (48%), Gaps = 52/618 (8%)

Query: 1408 ADPEVEVLGWQQNAAKIGMQRCAASSQWFNERISLARYAHI------------------- 1448
            AD  +  LGWQ   A+  +        W     +LARY  +                   
Sbjct: 1626 ADSSLPPLGWQSVVARRLVNHYLGLGSWILHLTALARYGDVPLCNLERDDPRFLIDVAYA 1685

Query: 1449 ---------LWISDDGVPDLGGTSEEDECFA-DEVHQPVLTYPGAYRKVSVELKIHHLSV 1498
                     LW S    PD  G  ++D     D V  P +  PG +  V +++++ +L++
Sbjct: 1686 RRLQANNVVLWWSPGPRPDHAGYEKDDVAGPLDVVQMPAVNNPGTFASVCIDIEVRNLAI 1745

Query: 1499 NALLKSNQVNEMEGGGLFGFD--QDMNSGPYNNELCGFDETTSSAPAFRVVKQLIQRCLT 1556
            N +L S+ +NE+EG     F+   D   G    E+   +   ++A   +V++++++    
Sbjct: 1746 NTILTSSLINELEGAESISFNPASDATGGDGAGEILHSENAFANA-GVQVLREMVKSWWA 1804

Query: 1557 DAVTSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEFRKLGATII 1616
            +A   G+  AD ++QHL RW+ SP S L+D  LH  +  + +K F  L+++FR++G+ ++
Sbjct: 1805 EAC-RGSTMADVMVQHLVRWVESPDSFLYDRALHYYVQIMSRKAFQQLMSDFRRVGSQVV 1863

Query: 1617 FANFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLFMDQYNYGG 1676
            FA+ +++++ T K ++  A AY   +LK+++++ LF +I+LE   +W  L++ DQ+NYGG
Sbjct: 1864 FASANRLLLQTTKGEVGNAYAYSQYILKSIKSKPLFHFIDLEIKEYWDYLVWYDQFNYGG 1923

Query: 1677 IPARADESLDDDSQ-VDIVSSWNIAEYLPKEIQDHFVLVVSEFMYIPWKHAQKLAASRAS 1735
                  E ++ ++Q +D++  W +A +LP  +Q  F   V EF+ +   H ++ AA   S
Sbjct: 1924 --KACQEVVEAETQSLDMIMHWQMATFLPLRLQSVFKEWVIEFIQLMHSH-KRPAAIDGS 1980

Query: 1736 LQEGSSCTPSITVAAAENFESHIV--QYVKGEISSYFTGKLLSIVRDAIHHMKKMNNDQH 1793
                +          +E+ E HI+  +  +  +     G + +  R+ +H    ++ D  
Sbjct: 1981 TPRATQLPVRSNNGLSEDGEGHIILGKAFERPLKREIAGLIAAQKRELLHPELAVDYDFP 2040

Query: 1794 NSPGVMQTAANIHKVDAPLEFIKHVCAAFALDQNVQHDVLVMRKNLLKYVRVREFAPEAE 1853
              PG     +N+H   A LE +K +    +LD+N+  +  ++RK LL  + VREF+ EA 
Sbjct: 2041 VLPG--SHLSNLHPSTAVLELVKMLMQVLSLDKNIALEARLVRKELLAMLDVREFSKEAT 2098

Query: 1854 FRDPCPSFILPNVICSYCNDCRDLDLCRDMALLA---------QDWHCAMPQCGQPYDRE 1904
            F++P  S  LP V C  C   RDLDLCRD  LL          + W C    C   YDR 
Sbjct: 2099 FQNPSESLKLPQVSCDNCTVARDLDLCRDEDLLPPPGEAQGQQRPWRCTF--CESEYDRN 2156

Query: 1905 VMENALLQIVRQRERLYHLQDLVCIRCNQVKAAHLAEQCACAGSFRCKEDASDFRSKMQI 1964
             +E  LL  V      +  QDL C +C  ++     E C C+G +       +   +M++
Sbjct: 2157 GLEEVLLAQVEAVVVEWTTQDLKCAKCGALRVNEFMEHCTCSGDWVATVKRDEVVRRMKV 2216

Query: 1965 FLNIANRQGFQLLQECTS 1982
            + N+A   G ++L++   
Sbjct: 2217 YRNVAKFYGLKMLEDVAG 2234


>gi|11079216|dbj|BAB17608.1| DNA polymerase epsilon [Drosophila melanogaster]
          Length = 2220

 Score = 1353 bits (3502), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 698/1414 (49%), Positives = 949/1414 (67%), Gaps = 67/1414 (4%)

Query: 25   EELEAKLGYDLFSEGDKRLGWLLTFASSSLEDEDTRKVYSCIDLYFVSQDGSTFKSKYKF 84
            +++++K G+D   +  +R G+L+   S+ + DED R++ + +DL+F+  DGS FK    +
Sbjct: 40   DKIDSKYGFDRVKDSQERTGYLINMHSNEVLDED-RRLIAALDLFFIQMDGSRFKCTVAY 98

Query: 85   RPYFYAATKEKMEMDVEAYLRRRYESQIADIEILEKEDLDLKNHLSGLHKSYLKISFDTV 144
            +PY     ++ M ++V  +L R+Y  QI+ +E + KEDLDL NHLSGL + Y+K+SF   
Sbjct: 99   QPYLLIRPEDNMHLEVARFLGRKYSGQISGLEHITKEDLDLPNHLSGLQQQYIKLSFLNQ 158

Query: 145  QQLMDVKKDLLHVVERNQAKFDAAEAYESILTGKREQ------------RPQDFLDCIVD 192
              +  V+++L+  V+RNQ +  +   Y  +L     Q            R QD++DCIVD
Sbjct: 159  TAMTKVRRELMSAVKRNQERQKSNTYYMQMLATSLAQSSAGSEDATLGKRQQDYMDCIVD 218

Query: 193  LREYDVPYHIRFAIDNDVRCGQWYDVSISSTG--PLLEKRVDLLQRAEVHVCAFDIETTK 250
            +RE+DVPYH+R +ID  + CGQWY++   S    P +  R D+L R E  V AFDIETTK
Sbjct: 219  IREHDVPYHVRVSIDLRIFCGQWYNIRCRSGVELPTITCRPDILDRPEPVVLAFDIETTK 278

Query: 251  LPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNVNNE 310
            LPLKFPDA  D +MMISYM+DGQGYLI NRE +  +++D EYTPKPEFEG F V N  NE
Sbjct: 279  LPLKFPDAQTDQVMMISYMIDGQGYLITNREIISSNVDDFEYTPKPEFEGNFIVFNEENE 338

Query: 311  IELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDKNQGECRA 370
            ++LL+ +F H+ EV+P I VTYNGD+FDWPF+ETRAA +   M +E+GF   ++ G   +
Sbjct: 339  MQLLQRFFDHIMEVRPHIIVTYNGDFFDWPFVETRAAVYDLDMKQEIGFSKLRD-GNYLS 397

Query: 371  KFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQMMASYS 430
            + A H+DC  WVKRDSYLP GSQGLKAV KAKL YDP+E++PEDM R A E+PQ++A+YS
Sbjct: 398  RPAIHMDCLCWVKRDSYLPVGSQGLKAVAKAKLRYDPVELDPEDMCRMAVEQPQVLANYS 457

Query: 431  VSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVICPNK 490
            VSDAVATYYLYM YVHPFIF+L TIIPM PDE+LRKGSGTLCE LLMV+AY A ++ PNK
Sbjct: 458  VSDAVATYYLYMKYVHPFIFALNTIIPMEPDEILRKGSGTLCETLLMVEAYHAQIVYPNK 517

Query: 491  HQSDPEKFYR-NHLLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQLLNNLDRDLQ 549
            HQS+  K     H+L+SETY+GGHVE LESGVFR+D+P  F+LDP+  +QL   +D  L+
Sbjct: 518  HQSELNKLSNEGHVLDSETYVGGHVEALESGVFRADIPCRFRLDPAMVKQLQEQVDAVLR 577

Query: 550  YAIKVEGKMDLESVSNYDEVKNAIMEKLLRLQEEPIREECPLIYHLDVAAMYPNIILTNR 609
            +AI+VE  + LE V N DEV+  I++ L  L + P R E P+IYHLDV AMYPNIILTNR
Sbjct: 578  HAIEVEEGIPLEKVLNLDEVRQEIVQGLQGLHDIPNRLEQPVIYHLDVGAMYPNIILTNR 637

Query: 610  LQPPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYYHLKKQIESE-FVDGT 668
            LQP ++V+D  C ACDFN+PG  C R ++W+WRGE+    R+++  +++Q+E+E F    
Sbjct: 638  LQPSAMVSDLDCAACDFNKPGVRCKRSMDWLWRGEMLPASRNEFQRIQQQLETEKFPPLF 697

Query: 669  NGHLSKSFLDLPKMEQQSRLKDRLKKYCQKAYKRV-LDKPVTELREAGICMRENSFYVDT 727
             G   ++F +L K +Q +  K RL  YC+KAYK+  L K   E R + IC +ENSFYVDT
Sbjct: 698  PGGPQRAFHELSKEDQAAYEKKRLTDYCRKAYKKTKLTK--LETRTSTICQKENSFYVDT 755

Query: 728  VRSFRDRRYEYKGLNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHKCILNSFYG 787
            VR+FRDRRYEYKGL KV K  ++ A ASG++ +I+ A+   VLYDSLQLAHKCILNSFYG
Sbjct: 756  VRAFRDRRYEYKGLTKVAKASVNAAVASGDAAEIKAAKGREVLYDSLQLAHKCILNSFYG 815

Query: 788  YVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLPGSFPENFT 847
            YVMR+GARW+SM MAG+V  TG+ II  AR +IE++G+PLELDTDGIWC+LPGSFP+ FT
Sbjct: 816  YVMRRGARWHSMPMAGIVCLTGSNIITKAREIIERVGRPLELDTDGIWCILPGSFPQEFT 875

Query: 848  FKTK-DLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKT---YETHSECSIEFEVD 903
              T  + KKK+ ISYP  +LN  V  + TNDQY  L          Y+   E SI FEVD
Sbjct: 876  IHTSHEKKKKINISYPNAVLNTMVKDHFTNDQYHELRKDKENNLPKYDIRDENSIFFEVD 935

Query: 904  GPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFL 963
            GPY AM+LPA+KEEG  +KKRYAVFN DGTLAELKGFE+KRRGEL+LIK FQ+ +F+ FL
Sbjct: 936  GPYLAMVLPAAKEEGKKLKKRYAVFNFDGTLAELKGFEVKRRGELQLIKNFQSSVFEAFL 995

Query: 964  HGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLADYGEQKSCAV 1023
             GST+EECY++VA VA+ WLD+L ++G ++ DSEL + ISE+ +MSK L +YG QKS ++
Sbjct: 996  AGSTLEECYASVAKVADYWLDVLYSRGSNLPDSELFELISENKSMSKKLEEYGAQKSTSI 1055

Query: 1024 TTARRLSDFLGDTMVKDKGLRCQYIVACEPQGTPVSERAVPVAIFETDAEIMKFYLRKWC 1083
            +TA+RL++FLG+ MVKD GL C+YI++ +P+G PV+ERA+P+AIF+++  + + +LR+W 
Sbjct: 1056 STAKRLAEFLGEQMVKDAGLACKYIISKKPEGAPVTERAIPLAIFQSEPSVRRHHLRRWL 1115

Query: 1084 K--TSSDVGIRSIVDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLYKKVREK 1141
            K  T  D  IR ++DW+YY +RL   IQKIITIPAA+Q ++NPVPRV HPDWL+KK+ EK
Sbjct: 1116 KDNTMGDADIRDVLDWNYYIERLGGTIQKIITIPAALQGLANPVPRVQHPDWLHKKMLEK 1175

Query: 1142 EDKFRQRKLVDIFSSLKKDDFLNKTCNAETNLMDENVEDLEDFPKKRRNSVNGPRPIVRC 1201
             D  +QR++ ++F+S  K   L           ++ + D+ED   K         PIV  
Sbjct: 1176 NDVLKQRRINEMFTSRPKPKPLATE--------EDKLADMEDLAGKDGGEGAAGCPIV-- 1225

Query: 1202 FEVNNEQKTVKTTDQVDSLRQQLEPSEVSDQQPSSQNAIDTENIDRIVDYKGWLELKKRK 1261
                 ++K ++  +  +   ++ +P   + +Q         E    IV+   W+  +K+K
Sbjct: 1226 ----TKRKRIQLEEHDE---EEAQPQATTWRQALGAPPPIGETRKTIVE---WVRFQKKK 1275

Query: 1262 WKDNLDRRKKQKLGSLRASHQANGVSESLGDMINHKEAQRRTGVGSYFRRQETAMTRCHW 1321
            WK   D+R++ +  S R                   E  R T  G + RR +  +    W
Sbjct: 1276 WKWQQDQRQRNRQASKR----------------TRGEDPRYT--GRFLRRAQRTLLDQPW 1317

Query: 1322 QIIQLVPSSQSGVFLAWVVVEGIMVRIPITVPRLFYLN--SKDPIVEKFPGRRVNKTLPH 1379
            QI+QLVP    G F  W ++   + +I +TVPR+FY+N  S  P  E    R+VN+ LP 
Sbjct: 1318 QIVQLVPVDDLGHFTVWALIGEELHKIKLTVPRIFYVNQRSAAPPEEGQLWRKVNRVLPR 1377

Query: 1380 GRRSFNLIEVMIDEDQFRKESKKLAALLADPEVE 1413
             R  FNL    + E  FR  S  + A LA P++E
Sbjct: 1378 SRPVFNLYRYSVPEQLFRDNSLGMLADLATPDIE 1411



 Score =  257 bits (656), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 175/557 (31%), Positives = 284/557 (50%), Gaps = 41/557 (7%)

Query: 1442 LARYAHILWISDDGVPDLGGTSEEDECFADEVHQP---VLTYPGAYRKVSVELKIHHLSV 1498
            L R+  +LW S    PDLGG   +D     E  +    V    G Y  V VEL +  L+V
Sbjct: 1676 LQRHNFVLWWSASTRPDLGGREADDSRLLAEFEESISVVQNKAGFYPDVCVELALDSLAV 1735

Query: 1499 NALLKSNQVNEMEGGG-LFGFD-------QDMNSGPYNNELCGFDETTSSAPAFRVVKQL 1550
            +ALL+S ++ EMEG      FD       ++M        L  +DET   + AFRV++ +
Sbjct: 1736 SALLQSTRIQEMEGASSAITFDVMPQVSLEEMIGTVPAATLPSYDETALCSAAFRVMRSM 1795

Query: 1551 IQRCLTDAVTSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEFRK 1610
            +   L +   + N+F+D  + H YRW+ S ++ L+DP L R L+ +M+K+F  ++AEF++
Sbjct: 1796 VNGWLREVSINRNIFSDFQIVHFYRWVRSSNALLYDPALRRSLNNLMRKMFLRIIAEFKR 1855

Query: 1611 LGATIIFANFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLFMD 1670
            LGATII+A+F+++I+ +GK  +S A  Y D ++++L+ +E+F  I+L     W+ +L+MD
Sbjct: 1856 LGATIIYADFNRIILSSGKKTVSDALGYVDYIVQSLRNKEMFHSIQLSFEQCWNFMLWMD 1915

Query: 1671 QYNYGGIPARADESLDDDSQVDIVSSWNIAEYLPKEIQDHFVLVVSEFMY-IPWKHAQKL 1729
            Q N+ GI  +  + + D++   IVS+  I +    +  D      SE    +    A++ 
Sbjct: 1916 QANFSGIRGKLPKGI-DETVSSIVSTTMIRDSERNQDDDEDEEEDSENRDPVESNEAEQD 1974

Query: 1730 AASRASLQEGSSCTPSIT--VAAAENFESHIVQYVKGEISSYFTGKLLSIVR----DAIH 1783
                 SL+   +    +       E FES +  +++       T + +  +     D I 
Sbjct: 1975 QEDELSLELNWTIGEHLPDENECREKFESLLTLFMQSLAEKKTTEQAIKDISHCAFDFIL 2034

Query: 1784 HMKKMNNDQHNSPGVMQTAANIHKVDAPLEFIKHVCAAFALDQNVQHDVLVMRKNLLKYV 1843
             + K       SPG              LE I+ +  A ++D+ +   +  +R+N+L+ V
Sbjct: 2035 KLHKNYGKGKPSPG--------------LELIRTLIKALSVDKTLAEQINELRRNMLRLV 2080

Query: 1844 RVREFAPEAEFRDPCPSFILPNVICSYCNDCRDLDLCRDMALLAQDWHCAMPQ-CGQPYD 1902
             + EF+  AE+ DPC S I+  VIC  CN CRDLDLC+D        H AM   C   YD
Sbjct: 2081 GIGEFSDLAEWEDPCDSHIINEVICKACNHCRDLDLCKDK-------HRAMKDGCYVAYD 2133

Query: 1903 REVMENALLQIVRQRERLYHLQDLVCIRCNQVKAAHLAEQCACAGSFRCKEDASDFRSKM 1962
             E +E  +L  ++++   Y LQDL C RC+++K  +LAE C CAG+F       D ++ +
Sbjct: 2134 NEEIEMRMLDALQRKMMSYVLQDLRCSRCSEIKRENLAEFCTCAGNFVPLISGKDIQTLL 2193

Query: 1963 QIFLNIANRQGFQLLQE 1979
              F  +A     QLLQ+
Sbjct: 2194 GTFNKVAANHKMQLLQQ 2210


>gi|378727967|gb|EHY54426.1| DNA polymerase epsilon catalytic subunit A [Exophiala dermatitidis
            NIH/UT8656]
          Length = 2236

 Score = 1353 bits (3502), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 695/1418 (49%), Positives = 932/1418 (65%), Gaps = 87/1418 (6%)

Query: 27   LEAKLGYDLFSEGDKRLGWLLTFASSSLEDEDTRKVYSCIDLYFVSQDGSTFKSKYKFRP 86
            ++  +G+  +  G KR+GWL    S+S+ED       + +D YF+ +DG  FK+  ++ P
Sbjct: 54   IDEAMGFPRYDSGRKRVGWLYNMHSTSVEDPKVPGGRAGVDFYFIGEDGENFKATLEYDP 113

Query: 87   YFYAATKEKMEMDVEAYLRRRYESQIADIEILEKEDLDLKNHLSGLHKSYLKISFDTVQQ 146
            YF  A +   E +VE + +R +E  +  +  + KEDL + NHL G  +++LK++F  V  
Sbjct: 114  YFLLAVRRGRETEVEEWCKRMFEGLVKTVTRVAKEDLQMPNHLLGYKRTFLKLTFANVSD 173

Query: 147  LMDVKKDLLHVVERNQAKFDAAEAYESILTGK--------------REQRPQDFLDCIVD 192
            L+ V+++++ + E+N+ K DA + Y  + +                R     +  + IVD
Sbjct: 174  LLSVRREVMPIAEKNKEKLDAMDTYAEVASANAGFDIYDEDQSGKGRSTGIAEASEFIVD 233

Query: 193  LREYDVPYHIRFAIDNDVRCGQWYDV-----SISSTGPLLEKRVDLLQRAEVHVCAFDIE 247
            +REYDVPYH+R AID D+R G+WY V     SIS T   LE+R   LQRA+  V AFDIE
Sbjct: 234  VREYDVPYHVRIAIDKDIRIGKWYTVEAKHGSISLT--CLEER---LQRADPVVLAFDIE 288

Query: 248  TTKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNV 307
            TTKLPLKFPD+  D +MMISYM+DGQG LI NRE V EDI D +YTPK E+EG F + N 
Sbjct: 289  TTKLPLKFPDSVIDQVMMISYMIDGQGVLITNREIVAEDIADFDYTPKAEYEGPFIIFNE 348

Query: 308  NNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDKNQGE 367
             NE  +L  +F+H++E +P +  TYNGD+FDWPF+E RA   G  M  E+GF+   ++  
Sbjct: 349  PNERAVLERFFSHIKEARPNVIATYNGDFFDWPFVEARAGILGIDMYAEIGFR-KSSEDI 407

Query: 368  CRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQMMA 427
             ++ +  H+DCFAWV RDSYLPQGS+GLKAVT AKLGYDP E++PE M  +A++ PQ++A
Sbjct: 408  YQSDYCVHMDCFAWVNRDSYLPQGSRGLKAVTVAKLGYDPDELDPELMTPYARKHPQILA 467

Query: 428  SYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVIC 487
             YSVSDAVATYYLYM YVHPFIFSL TIIP++PD+ LRKG+GTLCEMLLMVQAY+ N++ 
Sbjct: 468  EYSVSDAVATYYLYMKYVHPFIFSLCTIIPLNPDDTLRKGTGTLCEMLLMVQAYQKNIVL 527

Query: 488  PNKHQSDPEKFYRNHLLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQLLNNLDRD 547
            PNKH    E F+  HLL+SETY+GGHVE +E+GVFR+D+P +F +D +A ++LL +LD  
Sbjct: 528  PNKHTDPREAFWEGHLLDSETYVGGHVESIEAGVFRADIPVNFAIDTTAIDELLRDLDAA 587

Query: 548  LQYAIKVEGKMDLESVSNYDEVKNAIMEKLLRLQEEPIREECPLIYHLDVAAMYPNIILT 607
            L++ I VE K  L+ V+NY EV+  I EKL  L++ P R E PLIYHLDVA+MYPNI+ T
Sbjct: 588  LKFCITVEEKKSLDDVTNYAEVRAQICEKLNSLKQTPNRNERPLIYHLDVASMYPNIMTT 647

Query: 608  NRLQPPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYYHLKKQIESEFVDG 667
            NRLQP S+  +  C ACDFNRPGKTC R+L W WRGE    KR +Y  +++ + +E   G
Sbjct: 648  NRLQPDSMKAESDCAACDFNRPGKTCDRRLPWSWRGEFLPTKRDEYNMIRRAVANETFPG 707

Query: 668  TNGHLSK-SFLDLPKMEQQSRLKDRLKKYCQKAYKRVLDKPVTELREAGICMRENSFYVD 726
                  K +F  L   EQ + +K RL++Y +K Y ++ D  + E REA IC REN FYVD
Sbjct: 708  KGPKSQKRTFQQLSLDEQAAVVKRRLQEYSKKIYHKIHDSKIIE-REAIICQRENPFYVD 766

Query: 727  TVRSFRDRRYEYKGLNKVWKGKLSEAKASGNSIK-IQEAQDMVVLYDSLQLAHKCILNSF 785
            TVR+FRDRRY++KG  KVWKGK    K+SG + + I+EA+ M+VLYDSLQLAHK ILNSF
Sbjct: 767  TVRNFRDRRYDFKGQQKVWKGKTEALKSSGATAQEIEEAKKMIVLYDSLQLAHKVILNSF 826

Query: 786  YGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLPGSFPEN 845
            YGYVMRKG+RWYSMEMAGV   TGA IIQ AR L+E+IG+PLELDTDGIWC+LP +FPEN
Sbjct: 827  YGYVMRKGSRWYSMEMAGVTCLTGAHIIQMARELVERIGRPLELDTDGIWCMLPATFPEN 886

Query: 846  FTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEFEVDGP 905
              F  K+  KK+ ISYPCVMLN  V    TN QYQTLVDPV+  YETHS+ SI FEVDGP
Sbjct: 887  VVFTLKN-GKKMAISYPCVMLNHLVHGRFTNHQYQTLVDPVTFKYETHSDNSIFFEVDGP 945

Query: 906  YKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFLHG 965
            YKAMILP SKEE   +KKRYAVFN DG+LAELKGFE+KRRGELKLIK+FQ ++F  FL G
Sbjct: 946  YKAMILPTSKEEDKNLKKRYAVFNHDGSLAELKGFEVKRRGELKLIKIFQTQIFKFFLEG 1005

Query: 966  STIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLADYGEQKSCAVTT 1025
            +T+ E Y AVA VANRWLD+L  QG  +AD ELID I E+ +M+K+L +YG QKS ++TT
Sbjct: 1006 TTLAETYGAVARVANRWLDVLHQQGSTLADEELIDLICENKSMTKTLEEYGAQKSTSITT 1065

Query: 1026 ARRLSDFLGDTMVKDKGLRCQYIVACEPQGTPVSERAVPVAIFETDAEIMKFYLRKWCKT 1085
            A+RL++FLGD M+KDKGL C+YI++ +P+ TPV++RA+PVAIF  D  + +++LRKW K 
Sbjct: 1066 AKRLAEFLGDQMIKDKGLNCKYIISAKPRNTPVTDRAIPVAIFSADDSVKRYFLRKWLKE 1125

Query: 1086 S-SDVGIRSIVDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLYKKVREKEDK 1144
              +D+  R+++DW YY +RL S IQK+ITIPAA+QK+ NPVPRV HPDWL K++  K+DK
Sbjct: 1126 DPADMDPRTVIDWDYYLERLGSVIQKLITIPAALQKIRNPVPRVAHPDWLQKRITAKDDK 1185

Query: 1145 FRQRKLVDIFSSLKKDDFLNKTCNAETNLMDENVE---DLEDFPKKRRNSVNGPRPIVRC 1201
            F+Q+K+ D+F                 NL+D  +    D+ED         +G +P+V+ 
Sbjct: 1186 FKQKKVTDLFEK-------QPLAERSVNLLDHRLPGSGDIEDALD------HGSKPLVQL 1232

Query: 1202 FEVNNEQKTVKTTDQVDSLRQQLEPSEVSDQQPSSQNAIDTENIDRIVDYKGWLELKKRK 1261
                   K  K     ++ +  ++P       P + +           DY GWL+ +K+K
Sbjct: 1233 ------SKPAKRKADDNAKQSLVDPFAALPSDPPANDE----------DYSGWLQYQKQK 1276

Query: 1262 WKDNLDRRKKQKLGSLRASHQANGVSESLGDMINHKEAQRRTGVGSYFRRQETAMTRCHW 1321
            WK     R +++                   +   +       + S+FR Q   +    W
Sbjct: 1277 WKIQKQARARRR------------------QLFGERPNVATDSISSFFRNQAELLYINTW 1318

Query: 1322 QIIQLVPSSQSGVFLAWVVVEGIMVRIPITVPRLFYLNSKD---PIVEKFPG---RRVNK 1375
             I+QL      G  +A+V +   +  + I VPR  YLN K    P VE  PG    +VN 
Sbjct: 1319 HILQLRQGDSPGEVIAFVSIGKKIHALKIKVPRTLYLNLKGNELPNVE-VPGCEVEKVNH 1377

Query: 1376 TLPHGRRSFNLIEVMIDEDQFRKESKKLAALLADPEVE 1413
             LP+G  S +L ++ + ED + +E++ +A L   P VE
Sbjct: 1378 VLPNGHPSVHLFQLTMPEDIYLREAESVALLCNHPSVE 1415



 Score =  233 bits (595), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 162/625 (25%), Positives = 292/625 (46%), Gaps = 65/625 (10%)

Query: 1408 ADPEVEVLGWQQNAAKIGMQRCAASSQWFNERISLARYAHI------------------- 1448
            AD ++  LGWQ  A K  +        W +  I LARY  +                   
Sbjct: 1609 ADTDLPSLGWQGFAFKQLISHYFNVGGWLSHLIELARYGDVPLCNLEKDDPRFLIDLAYA 1668

Query: 1449 ---------LWISDDGVPDLGGTSEED--ECFADEVHQPVLTYPGAYRKVSVELKIHHLS 1497
                     LW SD   PD  G   +D      + V  P +  PGAY  V V++ + +L+
Sbjct: 1669 RRLKRSNVVLWWSDQPRPDHAGYERDDILGPLTEVVDMPSINNPGAYTTVCVDVAVQNLT 1728

Query: 1498 VNALLKSNQVNEMEGGGLFGFDQDMNSGPYNNELCGFDETTSSA------PAFRVVKQLI 1551
            +N +L S+ +N++EG       + +   P  +E    D  T ++       A  V+++++
Sbjct: 1729 INTILTSSIINDLEGSA-----ESVAFNPAGDEATSGDGNTVNSTGGFAQAALDVLREMV 1783

Query: 1552 QRCLTDAVTSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEFRKL 1611
            +    +A   GN  AD ++Q L RW+ +P S L+D  LH  +  + +K    L+ +FR++
Sbjct: 1784 KSWWAEAC-RGNRLADVMVQQLVRWVEAPASCLYDRHLHYYVLMMSKKALQQLITDFRRV 1842

Query: 1612 GATIIFANFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLFMDQ 1671
            G+ ++FA+ +++++ T K ++  A AY   +LK++Q + LF ++ LE   +W  LL+ D 
Sbjct: 1843 GSQVVFASSTRLLLQTSKQEVQNAYAYAQYILKSIQQKPLFHFLGLEVRDYWDVLLWYDA 1902

Query: 1672 YNYGGI-PARADESLDDDSQVDIVSSWNIAEYLPKEIQDHFVLVVSEFMYIPWKHAQKLA 1730
            YNYGG   +   ES   DS ++ +  W I+++LP  +Q  F   V  F+ I  ++ ++ +
Sbjct: 1903 YNYGGKGTSTITESTGLDS-LETIVHWQISQFLPVSLQPVFEDWVIAFIEI-MQNLKRPS 1960

Query: 1731 ASRASLQEGSSCTPSITVAAAENFESHIVQYVKGEISSYFTGKLLSIV---RDAIHHMKK 1787
             S +S    +    +     A+   + +   ++ + S     ++ +++   R+ + H + 
Sbjct: 1961 NSDSSTPRLTQVPSAFLSLTADPDSTEVTTVLQDDFSKPLKKQITALIRRQREELLHPEL 2020

Query: 1788 MNNDQHNS--PGVMQTAANIHKVDAPLEFIKHVCAAFALDQNVQHDVLVMRKNLLKYVRV 1845
             ++    S   G +++    H  D  LE +K +    +L + +Q +  ++RK LL    V
Sbjct: 2021 ASDWSFPSLPGGTLESFDPRHARDPVLELVKALMQVVSLSKPLQLEARLLRKELLALFDV 2080

Query: 1846 REFAPEAEFRDPCPSFILPNVICSYCNDCRDLDLCRDMALLA-----------QDWHCAM 1894
            REF  EA F +P  S     ++C  C   RDLDLCRD  +L            + W C  
Sbjct: 2081 REFGREARFENPSASLRFEGLVCDTCTMTRDLDLCRDEDVLPDPQATAEEAANKPWRC-- 2138

Query: 1895 PQCGQPYDREVMENALLQIVRQRERLYHLQDLVCIRCNQVKA--AHLAEQCACAGSFRCK 1952
            P C   Y++  +E  L+  V+     + +QDL C +C  ++   A   + C C G +   
Sbjct: 2139 PSCQSEYNKIALEEKLIARVQAALLSWQMQDLKCKKCGSLQGDDALFRDHCTCGGEWTST 2198

Query: 1953 EDASDFRSKMQIFLNIANRQGFQLL 1977
             D S+  SK+ +   +++  G +LL
Sbjct: 2199 MDKSEIHSKLSVMDRVSSAYGLRLL 2223


>gi|194742880|ref|XP_001953928.1| GF16992 [Drosophila ananassae]
 gi|190626965|gb|EDV42489.1| GF16992 [Drosophila ananassae]
          Length = 2224

 Score = 1353 bits (3501), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 704/1410 (49%), Positives = 956/1410 (67%), Gaps = 64/1410 (4%)

Query: 25   EELEAKLGYDLFSEGDKRLGWLLTFASSSLEDEDTRKVYSCIDLYFVSQDGSTFKSKYKF 84
            +++++K G+D   +  +R G+L+   S+ + DED R++ + +DL+F+  DGS FK    +
Sbjct: 40   DKIDSKYGFDRVKDSQERTGYLINMHSNEVLDED-RRLIAALDLFFIQMDGSRFKCTVAY 98

Query: 85   RPYFYAATKEKMEMDVEAYLRRRYESQIADIEILEKEDLDLKNHLSGLHKSYLKISFDTV 144
            +PY     ++ M ++V  +L R+Y  QI  +E + KEDLDL NHLSGL + Y+K+SF   
Sbjct: 99   QPYLLVRPEDNMHLEVARFLGRKYSGQICGLEHISKEDLDLPNHLSGLQQQYIKLSFLN- 157

Query: 145  QQLMDVKKDLLHVVERNQAKFDAAEAYESILTGKREQRPQDFLDCIVDLREYDVPYHIRF 204
            Q  M  K +  ++     +   ++   E     K++Q   D++DCIVD+RE+DVPYH+R 
Sbjct: 158  QTAMTKKSNTYYMQMLATSLAQSSAGSEDASVAKKQQ---DYMDCIVDIREHDVPYHVRV 214

Query: 205  AIDNDVRCGQWYDVSISST--GPLLEKRVDLLQRAEVHVCAFDIETTKLPLKFPDADYDI 262
            +ID  + CGQWY++   S    P +  R D+L+R E  V AFDIETTKLPLKFPDA  D 
Sbjct: 215  SIDLRIFCGQWYNIRCRSGVEMPTITSRPDILERPEPVVLAFDIETTKLPLKFPDAQTDQ 274

Query: 263  IMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNVNNEIELLRLWFAHMQ 322
            IMMISYM+DGQGYLI NRE +  D++D EYTPKPEFEG F V N  NE+ LL+ +F H+ 
Sbjct: 275  IMMISYMIDGQGYLITNREIISSDVDDFEYTPKPEFEGNFIVYNEENEMHLLQKFFDHIM 334

Query: 323  EVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDKNQGECRAKFACHLDCFAWV 382
            EV+P I VTYNGD+FDWPF+ETRAA +   M +E+GF   ++ G   ++ + H+DC  WV
Sbjct: 335  EVRPHIVVTYNGDFFDWPFVETRAAVYDLDMKQEIGFSKVRD-GNYLSRPSIHMDCLCWV 393

Query: 383  KRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQMMASYSVSDAVATYYLYM 442
            KRDSYLP GSQGLKAV KAKL YDP+E++PEDM R A E+PQ++A+YSVSDAVATYYLYM
Sbjct: 394  KRDSYLPVGSQGLKAVAKAKLRYDPVELDPEDMCRMAVEQPQVLANYSVSDAVATYYLYM 453

Query: 443  TYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVICPNKHQSDPEKFY-RN 501
             YVHPFIF+L TIIPM PDE+LRKGSGTLCE LLMV+AY A ++ PNKHQ +  K     
Sbjct: 454  KYVHPFIFALNTIIPMEPDEILRKGSGTLCETLLMVEAYHAQIVYPNKHQQELNKLSSEG 513

Query: 502  HLLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQLLNNLDRDLQYAIKVEGKMDLE 561
            H+L+SETY+GGHVE LESGVFR+D+P  F+LDP+  +QL  +LD  L++AI+VE  + +E
Sbjct: 514  HVLDSETYVGGHVEALESGVFRADIPCRFRLDPAMVKQLQEHLDAVLRHAIEVEEGIPME 573

Query: 562  SVSNYDEVKNAIMEKLLRLQEEPIREECPLIYHLDVAAMYPNIILTNRLQPPSIVTDEVC 621
             V N DEV+  I++ L  L + P R E P+IYHLDV AMYPNIILTNRLQP ++V+D  C
Sbjct: 574  KVLNLDEVRQEILQGLQGLHDIPNRLEQPVIYHLDVGAMYPNIILTNRLQPSAMVSDLDC 633

Query: 622  TACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYYHLKKQIESE-FVDGTNGHLSKSFLDLP 680
             ACDFN+PG  C R ++W+WRGE+    R+++  +++Q+E+E F     G   ++F +L 
Sbjct: 634  AACDFNKPGVRCKRSMDWLWRGEMLPASRNEFQRIQQQLETEKFPPLFPGGPQRAFHELS 693

Query: 681  KMEQQSRLKDRLKKYCQKAYKRV-LDKPVTELREAGICMRENSFYVDTVRSFRDRRYEYK 739
            K +Q    K RL  YC+KAYK+  L K   E R + IC +ENSFYVDTVR+FRDRRYEYK
Sbjct: 694  KEDQAGYEKKRLTDYCRKAYKKTKLTK--LETRTSTICQKENSFYVDTVRAFRDRRYEYK 751

Query: 740  GLNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHKCILNSFYGYVMRKGARWYSM 799
            GL KV K  +S A ASG++ +I+ A+   VLYDSLQLAHKCILNSFYGYVMR+GARW+SM
Sbjct: 752  GLTKVAKASVSAAVASGDAAEIKAAKGREVLYDSLQLAHKCILNSFYGYVMRRGARWHSM 811

Query: 800  EMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLPGSFPENFTFKTK-DLKKKLT 858
             MAG+V  TG+ II  AR +IE++G+PLELDTDGIWC+LPGSFP+ FT  T  + KKK+ 
Sbjct: 812  PMAGIVCLTGSNIITKAREIIERVGRPLELDTDGIWCILPGSFPQEFTIHTSHEKKKKIN 871

Query: 859  ISYPCVMLNVDVARNNTNDQYQTL---VDPVSKTYETHSECSIEFEVDGPYKAMILPASK 915
            ISYP  +LN  V  + TNDQY  L    D     Y+   E SI FEVDGPY AM+LPA+K
Sbjct: 872  ISYPNAVLNTMVKDHFTNDQYHELRKDKDGDLPKYDIRDENSIFFEVDGPYLAMVLPAAK 931

Query: 916  EEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFLHGSTIEECYSAV 975
            EEG  +KKRYAVFN DG+LAELKGFE+KRRGEL+LIK FQ+ +F+ FL GST+EECY++V
Sbjct: 932  EEGKKLKKRYAVFNFDGSLAELKGFEVKRRGELQLIKNFQSSVFEAFLAGSTLEECYASV 991

Query: 976  AAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLADYGEQKSCAVTTARRLSDFLGD 1035
            A VA+ WLD+L ++G ++ DSEL + I+E+ +MSK L +YG QKS +++TA+RL++FLG+
Sbjct: 992  AKVADYWLDVLYSRGSNLPDSELFELIAENKSMSKKLEEYGAQKSTSISTAKRLAEFLGE 1051

Query: 1036 TMVKDKGLRCQYIVACEPQGTPVSERAVPVAIFETDAEIMKFYLRKWCKTSS--DVGIRS 1093
             MVKD GL C+YI++ +P+G PV+ERA+P+AIF+++  + + +LR+W K S+  D  IR 
Sbjct: 1052 QMVKDAGLACKYIISKKPEGAPVTERAIPLAIFQSEPSVRRHHLRRWLKDSTMGDADIRD 1111

Query: 1094 IVDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLYKKVREKEDKFRQRKLVDI 1153
            ++DW+YY +RL   IQKIITIPAA+Q ++NPVPRV HPDWL+KK+ EK D  +QR++ ++
Sbjct: 1112 VLDWNYYIERLGGTIQKIITIPAALQGLANPVPRVQHPDWLHKKMLEKNDVLKQRRINEM 1171

Query: 1154 FSSLKKDDFLNKTCNAETNLMDENVEDLEDFPKKRRNSVNGPRPIV---RCFEVNNEQKT 1210
            F+S  K   L  +        ++ + D+ED   +      G RPIV   +  + ++ ++ 
Sbjct: 1172 FTSRPKPKPLVSS--------EDKLADMEDLAGRDGGEDVGGRPIVTKRKRTQADDGEED 1223

Query: 1211 VKTTDQVDSLRQQL-EPSEVSDQQPSSQNAIDTENIDRIVDYKGWLELKKRKWKDNLDRR 1269
             +TT Q  + RQ L  P  + + + +            IV+   W+  +KRKWK   ++R
Sbjct: 1224 QETTPQATTWRQALGAPPPIGETRKT------------IVE---WVRFQKRKWKWQQEQR 1268

Query: 1270 KKQKLGSLRASHQANGVSESLGDMINHKEAQRRTG----VGSYFRRQETAMTRCHWQIIQ 1325
            +K        S QAN    S GD  +     R TG    +G + RR +  +    WQI+Q
Sbjct: 1269 QK--------SRQAN--KRSRGD--DSAPVARATGSASTLGGFLRRAQRTLLDQPWQILQ 1316

Query: 1326 LVPSSQSGVFLAWVVVEGIMVRIPITVPRLFYLN--SKDPIVEKFPGRRVNKTLPHGRRS 1383
            LVP    G F  W ++   + RI +TVPR+FY+N  S  P  E    R+VN+ LP  R  
Sbjct: 1317 LVPIDDLGHFTVWALIGEELHRIKLTVPRIFYVNQRSAAPPEEGQLWRKVNRVLPRSRPV 1376

Query: 1384 FNLIEVMIDEDQFRKESKKLAALLADPEVE 1413
            FNL    + E  FR  S  + A LA P++E
Sbjct: 1377 FNLYRYSVPEQLFRDNSLGMLADLATPDIE 1406



 Score =  265 bits (678), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 173/567 (30%), Positives = 288/567 (50%), Gaps = 39/567 (6%)

Query: 1442 LARYAHILWISDDGVPDLGGTSEEDECFADEVHQP---VLTYPGAYRKVSVELKIHHLSV 1498
            L R+  +LW S    PDLGG   +D     E  +    V    G Y  V VEL +  L+V
Sbjct: 1670 LQRHNFVLWWSASTRPDLGGREADDSRLLAEFEESISVVQNKAGFYPDVCVELALDSLAV 1729

Query: 1499 NALLKSNQVNEMEGGG-LFGFD-------QDMNSGPYNNELCGFDETTSSAPAFRVVKQL 1550
            +ALL+S ++ EMEG      FD       ++M        L  +DET   + AFRV++ +
Sbjct: 1730 SALLQSTRIQEMEGASSAITFDVMPQVSLEEMIGTVPAATLPSYDETALCSAAFRVMRSM 1789

Query: 1551 IQRCLTDAVTSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEFRK 1610
            +   L +   + N+F+D  + H YRW+ S ++ L+DP L R L+ +M+K+F  ++AEF++
Sbjct: 1790 VNGWLREVSINRNIFSDFQIVHFYRWVRSSNALLYDPALRRSLNNLMRKMFLRIIAEFKR 1849

Query: 1611 LGATIIFANFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLFMD 1670
            LGATI++A+F+++I+ +GK  +S A  Y D ++++L+ +E+F  I+L     W+ +L+MD
Sbjct: 1850 LGATIVYADFNRIILSSGKKSVSDALGYVDYIVQSLRNKEMFHSIQLSFEQCWNFMLWMD 1909

Query: 1671 QYNYGGIPARADESLDDDSQVDIVSSWNIAEYLPKEIQDHFVLVVSEFMYIPWKHAQKLA 1730
            Q N+ GI  +  + + D++   IVS+    +    E+ +       E      +   ++ 
Sbjct: 1910 QANFSGIRGKLPKGI-DETVSSIVSTTMRRD---PEVNEVEEGDDDEDEDAENRDPVEIV 1965

Query: 1731 ASRASLQEGSSCTPSITVA--------AAENFESHIVQYVKGEISSYFTGKLLSIVRDAI 1782
             + A  +E  S   + T+           E FES +  +++       T +    +RD  
Sbjct: 1966 ETEADQEEELSLELNWTIGEHLPDENECREKFESLLTLFMQSLAEKKTTEQ---AIRDIS 2022

Query: 1783 HHMKKMNNDQHNSPGVMQTAANIHKVDAPLEFIKHVCAAFALDQNVQHDVLVMRKNLLKY 1842
            H         H + G  + +         LE I+ +    ++D+ +   +  +R+N+L+ 
Sbjct: 2023 HSAFDFILKLHKNYGKGKPSPG-------LELIRTLIKVLSVDKTLAEQINELRRNMLRL 2075

Query: 1843 VRVREFAPEAEFRDPCPSFILPNVICSYCNDCRDLDLCRDMALLAQD----WHCAMPQCG 1898
            V + EF+  AE+ DPC S ++  VIC  CN CRDLDLC+D     +D    W CA  QC 
Sbjct: 2076 VGIGEFSDMAEWTDPCDSHVINEVICKACNHCRDLDLCKDKHRAMKDGVPVWLCA--QCY 2133

Query: 1899 QPYDREVMENALLQIVRQRERLYHLQDLVCIRCNQVKAAHLAEQCACAGSFRCKEDASDF 1958
              YD E +E  +L  ++++   Y LQDL C RC+++K  +LAE C CAG+F       D 
Sbjct: 2134 VAYDNEEIEMRMLDALQRKMMSYVLQDLRCARCSEIKRENLAEFCTCAGNFVPLISGKDI 2193

Query: 1959 RSKMQIFLNIANRQGFQLLQECTSWIL 1985
            ++ +  F  +A     QLLQ+     L
Sbjct: 2194 KTLLSTFSKVAVNHKMQLLQQTVQQAL 2220


>gi|367048495|ref|XP_003654627.1| hypothetical protein THITE_2117750 [Thielavia terrestris NRRL 8126]
 gi|347001890|gb|AEO68291.1| hypothetical protein THITE_2117750 [Thielavia terrestris NRRL 8126]
          Length = 2279

 Score = 1352 bits (3500), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 691/1417 (48%), Positives = 929/1417 (65%), Gaps = 71/1417 (5%)

Query: 26   ELEAKLGYDLFSEGDKRLGWLLTFASSSLEDEDT--RKVYSCIDLYFVSQDGSTFKSKYK 83
            +++  +G+  +  G KR GWL+    +S++D         + +D YF+ +DGSTFK+  +
Sbjct: 54   QIDENMGFGRYDAGRKREGWLVNVQPTSIDDPRVPGGGGRAALDCYFIEEDGSTFKATVE 113

Query: 84   FRPYFYAATKEKMEMDVEAYLRRRYESQIAD-IEILEKEDLDLKNHLSGLHKSYLKISFD 142
            + PYF  A ++  E +VE + +R   + +   I+ +EKEDL + NHL G  +++L++ F 
Sbjct: 114  YEPYFLIACRKGHEGEVEEWCKRVPGAGVVKHIKRVEKEDLKMPNHLLGYRRTFLELRFH 173

Query: 143  TVQQLMDVKKDLLHVVERNQAKFDAAEAYESILTGKR------------EQRPQ----DF 186
             VQ LM  ++D++ + E+N+   DA + Y  + T               E+R      + 
Sbjct: 174  NVQDLMAARRDIMPIAEKNKKGMDAMDTYAEVATTNGGFDLFDDDPRADERRNNASFAEA 233

Query: 187  LDCIVDLREYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLLEKRVDLLQRAEVHVCAFDI 246
             D IVD+REYDVPYH+R  ID D+R G WY V   +    + +  D L  A+  V AFDI
Sbjct: 234  SDFIVDIREYDVPYHVRVMIDLDIRVGNWYFVEAKNGVTTVTRNEDRLAPADPVVMAFDI 293

Query: 247  ETTKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTN 306
            ETTK PLKFPDA  D IMM+SYM+DGQG+LI NRE V EDI D +YTPKPE+ G F + N
Sbjct: 294  ETTKAPLKFPDAAVDQIMMMSYMIDGQGFLITNREIVSEDIADFDYTPKPEYPGPFMIFN 353

Query: 307  VNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDKNQG 366
              +E  +L  +F H++E +P +  TYNGD+FDWPF+E RA+ +G  M  E+G++ D ++ 
Sbjct: 354  EPDEKAVLERFFLHVKEARPTVIATYNGDFFDWPFVEARASVNGIDMYHEIGWKKD-SED 412

Query: 367  ECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQMM 426
            + +  ++ H+DCF WV RDSYLPQGS+GLKAVT AKLGYDP E++PE M  +A E+PQ +
Sbjct: 413  QYKCNYSVHMDCFHWVNRDSYLPQGSRGLKAVTVAKLGYDPDELDPELMTPYASERPQTL 472

Query: 427  ASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVI 486
            A YSVSDAVATYYLYM YVHPFIFSL TI+P+ PD+ LRKG+GTLCEMLLMVQAYK  ++
Sbjct: 473  AEYSVSDAVATYYLYMKYVHPFIFSLCTILPLGPDDTLRKGTGTLCEMLLMVQAYKKEIV 532

Query: 487  CPNKHQSDPEKFYRNHLLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQLLNNLDR 546
             PNKH +  E F+  HLLESETY+GGHVE +E+GVFRSD+P +F +DP A ++LL +LD 
Sbjct: 533  LPNKHVAPKESFWEGHLLESETYVGGHVESIEAGVFRSDIPVNFAVDPGAVDELLRDLDA 592

Query: 547  DLQYAIKVEGKMDLESVSNYDEVKNAIMEKLLRLQEEPIREECPLIYHLDVAAMYPNIIL 606
             L ++I VE K  ++ V+NYDEVK  I  +L  L+E P R E PLIYHLDVA+MYPNI+ 
Sbjct: 593  ALTFSITVEEKKSMDDVTNYDEVKQQIAARLQNLKETPNRSERPLIYHLDVASMYPNIMT 652

Query: 607  TNRLQPPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYYHLKKQIESEFVD 666
            TNRLQP S++++  C ACDFNRPGKTC R+L W WRGE    KR +Y  ++  +E+E   
Sbjct: 653  TNRLQPDSMISESDCAACDFNRPGKTCDRRLPWAWRGEYLPAKRDEYNMIRHALENEKFP 712

Query: 667  GTN-GHLSKSFLDLPKMEQQSRLKDRLKKYCQKAYKRVLDKPVTELREAGICMRENSFYV 725
            G       +S+ DL   EQ +  + RL+ Y QK Y ++ D   T +REA IC REN FY+
Sbjct: 713  GKGVNSPMRSWQDLSADEQATLTRKRLQLYSQKVYHKIHDS-TTIVREAIICQRENPFYI 771

Query: 726  DTVRSFRDRRYEYKGLNKVWKGKLSEAKASGN-SIKIQEAQDMVVLYDSLQLAHKCILNS 784
            +TVR FRDRRY+YKG  KVWKGK    K+SG  + +I  A+ M+VL+DSLQLAHK ILNS
Sbjct: 772  NTVRDFRDRRYDYKGKAKVWKGKAEALKSSGAPASEIDNAKKMIVLFDSLQLAHKVILNS 831

Query: 785  FYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLPGSFPE 844
            FYGYVMRKG+RWYSMEMAGV   TGA IIQ AR L+E++G+PLELDTDGIWC+LP +FPE
Sbjct: 832  FYGYVMRKGSRWYSMEMAGVTCLTGATIIQLARSLVERLGRPLELDTDGIWCMLPATFPE 891

Query: 845  NFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEFEVDG 904
            NF FK K+  KKL ISYPCVMLN  V    TN QYQTLVDP +  YETHS+ SI FEVDG
Sbjct: 892  NFAFKLKN-GKKLAISYPCVMLNHLVHARFTNHQYQTLVDPKTFKYETHSDNSIFFEVDG 950

Query: 905  PYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFLH 964
            PYKAMILP SKEE   +KKRYAVFN DG+LAELKGFE+KRRGELKLIK+FQ ++F  FL 
Sbjct: 951  PYKAMILPTSKEEDKNLKKRYAVFNLDGSLAELKGFEVKRRGELKLIKIFQQQIFKFFLE 1010

Query: 965  GSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLADYGEQKSCAVT 1024
            G+T+ ECY+AVA VANRWLD+L N+G  +AD EL++ ISE+ +M+K+L +Y  QKS ++T
Sbjct: 1011 GTTLTECYAAVAKVANRWLDVLHNKGSTLADEELMELISENRSMTKTLEEYAGQKSTSIT 1070

Query: 1025 TARRLSDFLGDTMVKDKGLRCQYIVACEPQGTPVSERAVPVAIFETDAEIMKFYLRKWCK 1084
            TA+RL+DFLG+ MVKDKGL C++I+   P+  PV+ERAVPVAIF  + E  + YL+KW K
Sbjct: 1071 TAKRLADFLGEGMVKDKGLNCKFIICARPRNAPVTERAVPVAIFSAEEETKRMYLKKWLK 1130

Query: 1085 TS-SDVGIRSIVDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLYKKVREKED 1143
               +D   R+++DW YY +RL S IQK+ITIPAA+QKV NPVPRV HPDWL +++  K+D
Sbjct: 1131 EEPADTDPRALIDWDYYLERLGSVIQKLITIPAALQKVRNPVPRVPHPDWLQRRINNKDD 1190

Query: 1144 KFRQRKLVDIFSSLKKDDFLNKTCNAETNLMDENVEDLEDFPKKRRNSVNGPRPIVRCFE 1203
            K +Q+KL D+F    K   L +     T+    ++ED+ D  K        P+ +     
Sbjct: 1191 KMKQKKLTDLFGPTTKGGPLEEIDIPNTSSRLGDMEDIGDLLK--------PKTVSSAIA 1242

Query: 1204 VNNEQKTVKTTDQVDSLRQQLEPSEVSDQQPSSQNAIDTENIDRIVDYKGWLELKKRKWK 1263
             + +  T +        R+  EP+E  D   S    + + +     DY  +LE +K KWK
Sbjct: 1243 ASQKASTAQK-------RKSPEPAEKQDPFASLPKKMPSPS----EDYPAFLEYQKLKWK 1291

Query: 1264 --DNLDRRKKQKLGSLRASHQANGVSESLGDMINHKEAQRRTGVGSYFRRQETAMTRCHW 1321
                   R++   G  R + Q+N                    +   FR Q     +  W
Sbjct: 1292 LQKQARARRRHLFGDRRGNIQSN--------------------LQQTFRNQAEMTFKNTW 1331

Query: 1322 QIIQLVPSSQSGVFLAWVVVEGIMVRIPITVPRLFYLNSK-----DPIVEKFPGRRVNKT 1376
            Q++QL  +   G+ LA+V+++  +  + I VPR  +LN K     D  V+     +VN T
Sbjct: 1332 QVLQLRATDSPGIVLAYVLIDAKIHTVKINVPRQVFLNLKSRELPDIEVDGCHVEQVNHT 1391

Query: 1377 LPHGRRSFNLIEVMIDEDQFRKESKKLAALLADPEVE 1413
            LP+G  S +L ++ + E+ +  E++K + L   P VE
Sbjct: 1392 LPNGHSSVHLFKLTVPEEIYFAEAEKFSLLFNHPSVE 1428



 Score =  245 bits (625), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 168/664 (25%), Positives = 298/664 (44%), Gaps = 97/664 (14%)

Query: 1408 ADPEVEVLGWQQNAAKIGMQRCAASSQWFNERISLARYAHI------------------- 1448
            AD  +  LGWQ  AA+  +    +   W     +LA Y  +                   
Sbjct: 1626 ADSSLPPLGWQTVAARRLVNHYLSLGSWITHLTALAAYGDVPLCNLERDDPRFLIDVAYA 1685

Query: 1449 ---------LWISDDGVPDLGGTSEEDECFA-DEVHQPVLTYPGAYRKVSVELKIHHLSV 1498
                     LW S   +PD  G  ++D     D+V  P +  PG +  V V+L++ +L++
Sbjct: 1686 RRLQANNVVLWWSASPLPDHAGYEKDDVAGPLDQVQMPSVNNPGTFASVCVDLEVRNLAI 1745

Query: 1499 NALLKSNQVNEMEGGGLFGFDQDMNSGPYNNELCGFDETTSSAPAFRVVKQLIQRCLTDA 1558
            N +L S+ +NE+EG     F+     G    +   + E   +    +V++++++    +A
Sbjct: 1746 NTILTSSLINELEGADSISFNP-AGDGTGEGDEALYAENAFTNAGVQVLREMVKSWWAEA 1804

Query: 1559 VTSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEFRKLGATIIFA 1618
               G+  AD ++QHL RW+ SP S L+D  LH  +  + +K    L+A+FR++G+ +IFA
Sbjct: 1805 C-KGSTMADVMVQHLVRWVESPASCLYDRALHYYVQMMSRKALLQLMADFRRVGSQVIFA 1863

Query: 1619 NFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLFMDQYNYGGIP 1678
            + +++++ T K +++ A AY   +LK+++++ LF +I+LE   +W  L++ D++NYGG  
Sbjct: 1864 SPNRLLLQTTKAEVANAYAYAQYILKSIKSKPLFHFIDLEIKEYWDYLVWYDEFNYGG-- 1921

Query: 1679 ARADESLDDDSQ-VDIVSSWNIAEYLPKEIQDHFVLVVSEFMYIPWKHAQKLAASRASLQ 1737
                + ++ D Q + ++  W +A +LP  +Q  F   V EF+ +   H+ K    R +  
Sbjct: 1922 KACQQVVERDEQDLQLIMHWQMATFLPIRLQPTFRDWVVEFIEL--MHSLK----RPATG 1975

Query: 1738 EGSSCTPSITVAAAENFESHIVQYVKGEI------SSYFTGKLLSIV----RDAIH---- 1783
               + TP +T     N  + + +   G+I            +++S++    R+ +H    
Sbjct: 1976 SDPTATPRLTQLPVRNGNAGLAEDAPGQIILGNAFEKPLKKEIISLIATQKRELLHPELA 2035

Query: 1784 -----HMKKMNNDQHNSPGV----------------MQTAANIHKVDAPLEFIKHVCAAF 1822
                  +   ++  H +P                      +     +  LE +K +    
Sbjct: 2036 SDYTFPLLPGSHLAHLTPQAAVTSTSTSTSTSTSSSSSKPSPPSTANPVLELVKCLMQVL 2095

Query: 1823 ALDQNVQHDVLVMRKNLLKYVRVREFAPEAEFRDPCPSFILPNVICSYCNDCRDLDLCRD 1882
            +LD+N+  +  ++RK LL    VREFA +  F +P  S  L  + C  C   RDLD CRD
Sbjct: 2096 SLDRNITLEARLLRKELLALFDVREFARDGAFANPSASLRLAQLSCDACTMARDLDFCRD 2155

Query: 1883 MALL--------------------AQDWHCAMPQCGQPYDREVMENALLQIVRQRERLYH 1922
              LL                       W CA   C Q YDR  +E  LL  V      + 
Sbjct: 2156 EDLLPPGSAAGGAAGGVNGGGGSEVTTWRCAF--CAQEYDRNEIEERLLAGVEALVVQWA 2213

Query: 1923 LQDLVCIRCNQVKAAHLAEQCACAGSFRCKEDASDFRSKMQIFLNIANRQGFQLLQECTS 1982
             QDL C+RC  ++A    E C C+G +R   D  +   ++ ++ N+A   G ++L +   
Sbjct: 2214 TQDLKCVRCGALRANEFMEHCTCSGEWRETVDRGEVVRRLGVYRNVARFYGLRMLGDVVD 2273

Query: 1983 WILE 1986
             + E
Sbjct: 2274 GVFE 2277


>gi|164425735|ref|XP_955939.2| DNA polymerase epsilon [Neurospora crassa OR74A]
 gi|157071041|gb|EAA26703.2| DNA polymerase epsilon [Neurospora crassa OR74A]
          Length = 2262

 Score = 1352 bits (3500), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 694/1417 (48%), Positives = 937/1417 (66%), Gaps = 70/1417 (4%)

Query: 26   ELEAKLGYDLFSEGDKRLGWLLTFASSSLEDE--DTRKVYSCIDLYFVSQDGSTFKSKYK 83
            +++  +G+  +  G KR GWL+    +S++D         + +D YF+ +DGSTFK+  +
Sbjct: 56   QIDENMGFARYDAGKKREGWLVNVQPTSIDDPRIPGGGGRAALDCYFIEEDGSTFKATVE 115

Query: 84   FRPYFYAATKEKMEMDVEAYLRRRYESQ-IADIEILEKEDLDLKNHLSGLHKSYLKISFD 142
            + PYF  A ++  E +VE + +R      +  I  +EKEDL + NHL G  +++L++ F 
Sbjct: 116  YEPYFLVACRKGHEGEVEEWCKRVPGGGCVKSIRRVEKEDLKMPNHLLGYRRTFLELRFH 175

Query: 143  TVQQLMDVKKDLLHVVERNQAKFDAAEAYESILTG-----------KREQRPQDF----- 186
             VQ LM  K+D++ + E+N+   DA + Y  + +            + ++R  +      
Sbjct: 176  NVQDLMSAKRDVMPIAEKNKKGMDAMDTYAEVASANGGFDLFDDDSRNDERRHNAGFAEA 235

Query: 187  LDCIVDLREYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLLEKRVDLLQRAEVHVCAFDI 246
             D IVD+REYDVPYH+R  ID D+R  +WY V   +    ++   + L  A+  V AFDI
Sbjct: 236  SDFIVDIREYDVPYHVRVMIDLDIRVARWYHVEAKNGVTTVKVNEERLAMADPVVMAFDI 295

Query: 247  ETTKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTN 306
            ETTKLPLKFPDA  D IMM+SYM+DGQG+LI NRE + EDI D +YTPKPE++G F + N
Sbjct: 296  ETTKLPLKFPDAAIDQIMMVSYMIDGQGFLITNREIISEDIADFDYTPKPEYQGPFMIFN 355

Query: 307  VNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDKNQG 366
              +E  LL  +F H++E +P +  TYNGD+FDWPF+E RA+ +G  M  E+G++ D ++ 
Sbjct: 356  EPDEKALLERFFLHIKEARPTVIATYNGDFFDWPFVEARASINGIDMYHEIGWKKD-SED 414

Query: 367  ECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQMM 426
            + +  ++ H+DCF WV RDSYLPQGS+GLKAVT AKLGYDP E++PE M  +A E+PQ +
Sbjct: 415  QYKCNYSVHMDCFHWVNRDSYLPQGSRGLKAVTVAKLGYDPDELDPELMTPYASERPQTL 474

Query: 427  ASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVI 486
            A YSVSDAVATYYLYM YVHPFIFSL TI+P+ PD+ LRKG+GTLCEMLLMVQAY+  ++
Sbjct: 475  AEYSVSDAVATYYLYMKYVHPFIFSLCTILPLGPDDTLRKGTGTLCEMLLMVQAYQKEIV 534

Query: 487  CPNKHQSDPEKFYRNHLLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQLLNNLDR 546
             PNKH    E F+  HLL+SETY+GGHVE +E+GVFR+D+P +F +DP+A ++L+ +LD 
Sbjct: 535  LPNKHVQPKESFWEGHLLDSETYVGGHVESIEAGVFRADIPVNFAVDPTAVDELIRDLDA 594

Query: 547  DLQYAIKVEGKMDLESVSNYDEVKNAIMEKLLRLQEEPIREECPLIYHLDVAAMYPNIIL 606
             L ++I VE K +L  ++NYDEVK  I  +L+ L+E P R E PLIYHLDVA+MYPNI+ 
Sbjct: 595  ALTFSITVEEKKELSDIANYDEVKEQITARLMNLKETPNRLERPLIYHLDVASMYPNIMT 654

Query: 607  TNRLQPPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYYHLKKQIESEFVD 666
            TNRLQP S++++  C ACDFNRPGKTC R+L W WRGE    KR +Y  ++  +E+E   
Sbjct: 655  TNRLQPDSMISESTCAACDFNRPGKTCDRRLPWAWRGEYLPAKRDEYNMIRHALENERFP 714

Query: 667  GTNGHLS-KSFLDLPKMEQQSRLKDRLKKYCQKAYKRVLDKPVTELREAGICMRENSFYV 725
            G   +   +SF DL   EQ + ++ RL+ Y QK Y ++ D   T +REA IC REN FY+
Sbjct: 715  GKYPNSPMRSFQDLSADEQATLIRKRLQLYSQKVYHKIHDS-TTIVREAIICQRENPFYI 773

Query: 726  DTVRSFRDRRYEYKGLNKVWKGKLSEAKASGNSI-KIQEAQDMVVLYDSLQLAHKCILNS 784
            +TVR FRDRRY+YKG  KVWKGK    K+SG S  +I  A+ M++L+DSLQLAHK ILNS
Sbjct: 774  NTVRDFRDRRYDYKGKAKVWKGKTDSLKSSGASASEIDNAKKMIILFDSLQLAHKVILNS 833

Query: 785  FYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLPGSFPE 844
            FYGYVMRKG+RWYSMEMAGV   TGA IIQ AR LIE++G+PLELDTDGIWC+LP +FPE
Sbjct: 834  FYGYVMRKGSRWYSMEMAGVTCLTGATIIQLARQLIERLGRPLELDTDGIWCMLPATFPE 893

Query: 845  NFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEFEVDG 904
            NF FK K+  KK+TISYPCVMLN  V    TN QYQTLVDP +  YETHS+ SI FEVDG
Sbjct: 894  NFVFKLKN-GKKMTISYPCVMLNHLVHDKFTNHQYQTLVDPKTFKYETHSDNSIFFEVDG 952

Query: 905  PYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFLH 964
            PYKAMILP SKEE   +KKRYAVFNDDG+LAELKGFE+KRRGELKLIK+FQ ++F  FL 
Sbjct: 953  PYKAMILPTSKEEDKNLKKRYAVFNDDGSLAELKGFEVKRRGELKLIKIFQQQIFKFFLE 1012

Query: 965  GSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLADYGEQKSCAVT 1024
            G+T+ ECY+AVA VANRWLD+L ++G  +AD EL++ ISE+ +M+K+L +YG QKS ++T
Sbjct: 1013 GTTLAECYNAVAKVANRWLDVLHSKGATLADEELMELISENRSMTKTLEEYGSQKSTSIT 1072

Query: 1025 TARRLSDFLGDTMVKDKGLRCQYIVACEPQGTPVSERAVPVAIFETDAEIMKFYLRKWCK 1084
            TA+RL+DFLG+ MVKDKGL C++I+   P+  PV+ERAVPVAIF  + E  + YL+KW K
Sbjct: 1073 TAKRLADFLGEQMVKDKGLNCKFIICARPKNAPVTERAVPVAIFSAEEETKRMYLKKWLK 1132

Query: 1085 TS-SDVGIRSIVDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLYKKVREKED 1143
               +D   R+++DW YY +RL S IQK+ITIPAA+QKV NPVPRV HPDWL +++  K+D
Sbjct: 1133 EEPADTDPRALLDWDYYLERLGSVIQKLITIPAALQKVRNPVPRVPHPDWLQRRINIKDD 1192

Query: 1144 KFRQRKLVDIFSSLKKDDFLNKTCNAETNLMDENVEDLEDFPKKRRNSVNGPRPIVRCFE 1203
            K +Q+KL D+F    K    + T  A        + D+EDF        N  +P      
Sbjct: 1193 KMKQKKLTDLFGPTTKGPLQDITHLANGT----QLGDMEDFG-------NLLKPKTVSDA 1241

Query: 1204 VNNEQKTVKTTDQVDSLRQQLEPSEVSDQQPSSQNAIDTENIDRIVDYKGWLELKKRKWK 1263
            ++  QKTV    + D      EP+   +  P +  A+  +      DY  +LE +K+KWK
Sbjct: 1242 ISATQKTVTAQKRKDP-----EPAAAENLDPFA--ALPKKMPSPSEDYAAFLEYQKQKWK 1294

Query: 1264 DNLDRRKKQK--LGSLRASHQANGVSESLGDMINHKEAQRRTGVGSYFRRQETAMTRCHW 1321
                 R +++   G  R + Q+N                    +   FR Q     R  W
Sbjct: 1295 LQKQARARRRHLFGERRGNAQSN--------------------IQQTFRSQAEMTFRNTW 1334

Query: 1322 QIIQLVPSSQSGVFLAWVVVEGIMVRIPITVPRLFYLNSK-----DPIVEKFPGRRVNKT 1376
            Q++QL  S   G+ +A V+++  +  + I VPR  +LN K     D  VE     +VN T
Sbjct: 1335 QLLQLRASDSPGIVVAHVLIDAKIHTLKINVPRQVFLNLKSRELPDIEVEGCHVEQVNHT 1394

Query: 1377 LPHGRRSFNLIEVMIDEDQFRKESKKLAALLADPEVE 1413
            LP+G  S +L ++ + ED +  E++K + L   P VE
Sbjct: 1395 LPNGHSSVHLFKLTVPEDIYFAEAEKFSLLFNHPSVE 1431



 Score =  241 bits (615), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 167/640 (26%), Positives = 291/640 (45%), Gaps = 86/640 (13%)

Query: 1408 ADPEVEVLGWQQNAAKIGMQRCAASSQWFNERISLARYAHI------------------- 1448
             D  +  LGWQ   A+  +    +   W     +LARY  +                   
Sbjct: 1628 GDSSLPPLGWQSVVARRLVNHYLSLGSWITHMTALARYGDVPLCNLERDDPRFLIDIAYA 1687

Query: 1449 ---------LWISDDGVPDLGGTSEEDECFA-DEVHQPVLTYPGAYRKVSVELKIHHLSV 1498
                     LW S    PD  G  ++D     D+V  P +  PG Y  V ++L++ +L++
Sbjct: 1688 RRLMANNVVLWWSPSPRPDHAGYEKDDVVGPLDQVQMPSVNNPGTYASVCIDLEVRNLAI 1747

Query: 1499 NALLKSNQVNEMEGGGLFGFDQDMN-SGPYNNELCGFDETTSSAPAFRVVKQLIQRCLTD 1557
            N +L S+ +NE+EG     F+   + +G  + E   + E   +    +V++++++    +
Sbjct: 1748 NTILTSSLINELEGADNISFNPAADATGSGDGEEFLYSENAFANAGVQVLREMVKSWWAE 1807

Query: 1558 AVTSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEFRKLGATIIF 1617
            A   G+  AD ++QHL RW+ SP S L+D  LH  +  + +K    L+A+FR++G+ +IF
Sbjct: 1808 AC-KGSTMADVMVQHLVRWVESPASCLYDRALHYYVQMMSRKALLQLMADFRRVGSQVIF 1866

Query: 1618 ANFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLFMDQYNYGGI 1677
            A+ +++++ T K ++  A AY   +LK+++ + LF +I+LE   +W  L++ D++NYGG 
Sbjct: 1867 ASSNRLLLQTTKSEVGNAYAYTQYILKSIKGKPLFHFIDLEIKEYWDYLVWYDEFNYGG- 1925

Query: 1678 PARADESLDDDSQ-VDIVSSWNIAEYLPKEIQDHFVLVVSEFMYIPWKHAQKLAASRASL 1736
                 E L+ D Q + ++  W +A +LP  +Q  F   V EF+ +   H+ K    R S 
Sbjct: 1926 -KATQEVLERDEQDLQMIMHWQMATFLPVRLQPIFRDWVVEFIQL--MHSIK----RPSF 1978

Query: 1737 QEGSSCTPSITVAAAENFESHIVQYVKGEISSYFTGKLL-------------SIVRDAIH 1783
                + TP +T         ++ +   G +     GK               +  R+ +H
Sbjct: 1979 GSDPTATPRLTQLPVNMRNGNLGE--DGAVGQIILGKAFEKPLKKEIANLINTQRRELLH 2036

Query: 1784 ------------------HMKKMNNDQHNSPGVM--QTAANIHKVDAPLEFIKHVCAAFA 1823
                              H+   N    N+      + AA+ + V   LE +K +    +
Sbjct: 2037 PELAGDYTFPQLPGSHLSHLSMSNAKSSNTKNAAGKKVAASANPV---LELVKALMQVLS 2093

Query: 1824 LDQNVQHDVLVMRKNLLKYVRVREFAPEAEFRDPCPSFILPNVICSYCNDCRDLDLCRD- 1882
            LD+N+  +  ++RK LL    VREF+ +  F++P  S  L    C  C   RD+DLCRD 
Sbjct: 2094 LDKNITLEARLLRKELLAMFDVREFSKDGAFQNPSESLKLAQFSCENCTMARDIDLCRDE 2153

Query: 1883 --MALLAQD---WHCAMPQCGQPYDREVMENALLQIVRQRERLYHLQDLVCIRCNQVKAA 1937
              M    Q+   W C  P C   YDR  +E  L+  V      +  QDL C +C  ++  
Sbjct: 2154 DFMTAPGQEKGRWKC--PYCEMDYDRNEIEERLVAEVEAMVVEWTTQDLKCGKCGALRVN 2211

Query: 1938 HLAEQCACAGSFRCKEDASDFRSKMQIFLNIANRQGFQLL 1977
               E C C+G +R      +   +++++ N+A   G ++L
Sbjct: 2212 EFMEHCTCSGEWRELVKREEVMRRLKVYRNVARYYGLRML 2251


>gi|336467155|gb|EGO55319.1| DNA polymerase epsilon [Neurospora tetrasperma FGSC 2508]
 gi|350288222|gb|EGZ69458.1| DNA polymerase epsilon [Neurospora tetrasperma FGSC 2509]
          Length = 2283

 Score = 1350 bits (3495), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 694/1417 (48%), Positives = 936/1417 (66%), Gaps = 70/1417 (4%)

Query: 26   ELEAKLGYDLFSEGDKRLGWLLTFASSSLEDE--DTRKVYSCIDLYFVSQDGSTFKSKYK 83
            +++  +G+  +  G KR GWL+    +S++D         + +D YF+ +DGSTFK+  +
Sbjct: 56   QIDENMGFARYDAGKKREGWLVNVQPTSIDDPRIPGGGGRAALDCYFIEEDGSTFKATVE 115

Query: 84   FRPYFYAATKEKMEMDVEAYLRRRYESQ-IADIEILEKEDLDLKNHLSGLHKSYLKISFD 142
            + PYF  A ++  E +VE + +R      I  I  +EKEDL + NHL G  +++L++ F 
Sbjct: 116  YEPYFLVACRKGHEGEVEEWCKRVPGGGCIKSIRRVEKEDLKMPNHLLGYRRTFLELRFH 175

Query: 143  TVQQLMDVKKDLLHVVERNQAKFDAAEAYESILTG-----------KREQRPQDF----- 186
             VQ LM  K+D++ + E+N+   D  + Y  + +            + ++R  +      
Sbjct: 176  NVQDLMSAKRDVMPIAEKNKKGMDTMDTYAEVASANGGFDLFDDDSRNDERRHNAGFAEA 235

Query: 187  LDCIVDLREYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLLEKRVDLLQRAEVHVCAFDI 246
             D IVD+REYDVPYH+R  ID D+R  +WY V   +    ++   + L  A+  V AFDI
Sbjct: 236  SDFIVDIREYDVPYHVRVMIDLDIRVARWYHVEAKNGVTTVKVNEERLAMADPVVMAFDI 295

Query: 247  ETTKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTN 306
            ETTKLPLKFPDA  D IMM+SYM+DGQG+LI NRE + EDI D +YTPKPE++G F + N
Sbjct: 296  ETTKLPLKFPDAAIDQIMMVSYMIDGQGFLITNREIISEDIADFDYTPKPEYQGPFMIFN 355

Query: 307  VNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDKNQG 366
              +E  LL  +F H++E +P +  TYNGD+FDWPF+E RA+ +G  M  E+G++ D ++ 
Sbjct: 356  EPDEKALLERFFLHIKEARPTVIATYNGDFFDWPFVEARASINGIDMYHEIGWKKD-SED 414

Query: 367  ECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQMM 426
            + +  ++ H+DCF WV RDSYLPQGS+GLKAVT AKLGYDP E++PE M  +A E+PQ +
Sbjct: 415  QYKCNYSVHMDCFHWVNRDSYLPQGSRGLKAVTVAKLGYDPDELDPELMTPYASERPQTL 474

Query: 427  ASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVI 486
            A YSVSDAVATYYLYM YVHPFIFSL TI+P+ PD+ LRKG+GTLCEMLLMVQAY+  ++
Sbjct: 475  AEYSVSDAVATYYLYMKYVHPFIFSLCTILPLGPDDTLRKGTGTLCEMLLMVQAYQKEIV 534

Query: 487  CPNKHQSDPEKFYRNHLLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQLLNNLDR 546
             PNKH    E F+  HLL+SETY+GGHVE +E+GVFR+D+P +F +DP+A ++L+ +LD 
Sbjct: 535  LPNKHVQPKESFWEGHLLDSETYVGGHVESIEAGVFRADIPVNFAVDPTAVDELIRDLDA 594

Query: 547  DLQYAIKVEGKMDLESVSNYDEVKNAIMEKLLRLQEEPIREECPLIYHLDVAAMYPNIIL 606
             L ++I VE K +L  ++NYDEVK  I  +L+ L+E P R E PLIYHLDVA+MYPNI+ 
Sbjct: 595  ALTFSITVEEKKELSDIANYDEVKEQITARLMNLKETPNRLERPLIYHLDVASMYPNIMT 654

Query: 607  TNRLQPPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYYHLKKQIESEFVD 666
            TNRLQP S++++  C ACDFNRPGKTC R+L W WRGE    KR +Y  ++  +E+E   
Sbjct: 655  TNRLQPDSMISESTCAACDFNRPGKTCDRRLPWAWRGEYLPAKRDEYNMIRHALENERFP 714

Query: 667  GTNGHLS-KSFLDLPKMEQQSRLKDRLKKYCQKAYKRVLDKPVTELREAGICMRENSFYV 725
            G   +   +SF DL   EQ + ++ RL+ Y QK Y ++ D   T +REA IC REN FY+
Sbjct: 715  GKYPNSPMRSFQDLSADEQATLIRKRLQLYSQKVYHKIHDS-TTIVREAIICQRENPFYI 773

Query: 726  DTVRSFRDRRYEYKGLNKVWKGKLSEAKASGNSI-KIQEAQDMVVLYDSLQLAHKCILNS 784
            +TVR FRDRRY+YKG  KVWKGK    K+SG S  +I  A+ M++L+DSLQLAHK ILNS
Sbjct: 774  NTVRDFRDRRYDYKGKAKVWKGKTDSLKSSGASASEIDNAKKMIILFDSLQLAHKVILNS 833

Query: 785  FYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLPGSFPE 844
            FYGYVMRKG+RWYSMEMAGV   TGA IIQ AR LIE++G+PLELDTDGIWC+LP +FPE
Sbjct: 834  FYGYVMRKGSRWYSMEMAGVTCLTGATIIQLARQLIERLGRPLELDTDGIWCMLPATFPE 893

Query: 845  NFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEFEVDG 904
            NF FK K+  KK+TISYPCVMLN  V    TN QYQTLVDP +  YETHS+ SI FEVDG
Sbjct: 894  NFVFKLKN-GKKMTISYPCVMLNHLVHDKFTNHQYQTLVDPKTFKYETHSDNSIFFEVDG 952

Query: 905  PYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFLH 964
            PYKAMILP SKEE   +KKRYAVFNDDG+LAELKGFE+KRRGELKLIK+FQ ++F  FL 
Sbjct: 953  PYKAMILPTSKEEDKNLKKRYAVFNDDGSLAELKGFEVKRRGELKLIKIFQQQIFKFFLE 1012

Query: 965  GSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLADYGEQKSCAVT 1024
            G+T+ ECY+AVA VANRWLD+L ++G  +AD EL++ ISE+ +M+K+L +YG QKS ++T
Sbjct: 1013 GTTLAECYNAVAKVANRWLDVLHSKGATLADEELMELISENRSMTKTLEEYGSQKSTSIT 1072

Query: 1025 TARRLSDFLGDTMVKDKGLRCQYIVACEPQGTPVSERAVPVAIFETDAEIMKFYLRKWCK 1084
            TA+RL+DFLG+ MVKDKGL C++I+   P+  PV+ERAVPVAIF  + E  + YL+KW K
Sbjct: 1073 TAKRLADFLGEQMVKDKGLNCKFIICARPKNAPVTERAVPVAIFSAEEETKRMYLKKWLK 1132

Query: 1085 TS-SDVGIRSIVDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLYKKVREKED 1143
               +D   R+++DW YY +RL S IQK+ITIPAA+QKV NPVPRV HPDWL +++  K+D
Sbjct: 1133 EEPADTDPRALLDWDYYLERLGSVIQKLITIPAALQKVRNPVPRVPHPDWLQRRINIKDD 1192

Query: 1144 KFRQRKLVDIFSSLKKDDFLNKTCNAETNLMDENVEDLEDFPKKRRNSVNGPRPIVRCFE 1203
            K +Q+KL D+F    K    + T  A        + D+EDF        N  +P      
Sbjct: 1193 KMKQKKLTDLFGPTTKGPLQDITHLANGT----QLGDMEDFG-------NLLKPKTVSDA 1241

Query: 1204 VNNEQKTVKTTDQVDSLRQQLEPSEVSDQQPSSQNAIDTENIDRIVDYKGWLELKKRKWK 1263
            ++  QKTV    + D      EP+   +  P +  A+  +      DY  +LE +K+KWK
Sbjct: 1242 ISATQKTVTAQKRKDP-----EPAAAENLDPFA--ALPKKMPSPSEDYAAFLEYQKQKWK 1294

Query: 1264 DNLDRRKKQK--LGSLRASHQANGVSESLGDMINHKEAQRRTGVGSYFRRQETAMTRCHW 1321
                 R +++   G  R + Q+N                    +   FR Q     R  W
Sbjct: 1295 LQKQARARRRHLFGERRGNAQSN--------------------IQQTFRSQAEMTFRNTW 1334

Query: 1322 QIIQLVPSSQSGVFLAWVVVEGIMVRIPITVPRLFYLNSK-----DPIVEKFPGRRVNKT 1376
            Q++QL  S   G+ +A V+++  +  + I VPR  +LN K     D  VE     +VN T
Sbjct: 1335 QLLQLRASDSPGIVVAHVLIDAKIHILKINVPRQVFLNLKSRELPDIEVEGCHVEQVNHT 1394

Query: 1377 LPHGRRSFNLIEVMIDEDQFRKESKKLAALLADPEVE 1413
            LP+G  S +L ++ + ED +  E++K + L   P VE
Sbjct: 1395 LPNGHSSVHLFKLTVPEDIYFAEAEKFSLLFNHPSVE 1431



 Score =  228 bits (580), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 169/658 (25%), Positives = 288/658 (43%), Gaps = 101/658 (15%)

Query: 1408 ADPEVEVLGWQQNAAKIGMQRCAASSQWFNERISLARYAHI------------------- 1448
             D  +  LGWQ   A+  +    +   W     +LARY  +                   
Sbjct: 1628 GDSSLPPLGWQSVVARRLVNHYLSLGSWITHMTALARYGDVPLCNLERDDPRFLIDIAYA 1687

Query: 1449 ---------LWISDDGVPDLGGTSEEDECFA-DEVHQPVLTYPGAYRKVSVELKIHHLSV 1498
                     LW S    PD  G  ++D     D+V  P +  PG Y  V ++L++ +L++
Sbjct: 1688 RRLMANNVVLWWSPSPRPDHAGYEKDDVVGPLDQVQMPSVNNPGTYASVCIDLEVRNLAI 1747

Query: 1499 NALLKSNQVNEMEGGGLFGFDQDMN-SGPYNNELCGFDETTSSAPAFRVVKQLIQRCLTD 1557
            N +L S+ +NE+EG     F+   + +G  + E   + E   +    +V++++++    +
Sbjct: 1748 NTILTSSLINELEGADNISFNPAADATGSGDGEEFLYSENAFANAGVQVLREMVKSWWAE 1807

Query: 1558 AVTSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEFRKLGATIIF 1617
            A   G+  AD ++QHL RW+ SP S L+D  LH  +  + +K    L+A+FR++G+ +IF
Sbjct: 1808 AC-KGSTMADVMVQHLVRWVESPASCLYDRALHYYVQMMSRKALLQLMADFRRVGSQVIF 1866

Query: 1618 ANFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLFMDQYNYGGI 1677
            A+ +++++ T K ++  A AY   +LK+++ + LF +I+LE   +W  L++ D++NYGG 
Sbjct: 1867 ASSNRLLLQTTKSEVGNAYAYTQYILKSIKGKPLFHFIDLEIKEYWDYLVWYDEFNYGG- 1925

Query: 1678 PARADESLDDDSQ-VDIVSSWNIAEYLPKEIQDHFVLVVSEFMYIPWKHAQKLAASRASL 1736
                 E L+ D Q + ++  W +A +LP  +Q  F   V EF+ +   H+ K    R S 
Sbjct: 1926 -KATQEVLERDEQDLQMIMHWQMATFLPVRLQPIFRDWVVEFIQL--MHSIK----RPSF 1978

Query: 1737 QEGSSCTPSITVAAAENFESHIVQYVKGEISSYFTGK------------LLSIVRDAIHH 1784
                + TP +T         ++ +   G +     GK            L++  R  + H
Sbjct: 1979 GSDPTATPRLTQLPVNMRNGNLGE--DGAVGQIILGKAFEKPLKKEIANLINTQRRELLH 2036

Query: 1785 MKKMNNDQHNS-PG-------------VMQTAANIHKVDAP----LEFIKHVCAAFALDQ 1826
             +   +      PG                  A   KV A     LE +K +    +LD+
Sbjct: 2037 PELAGDYTFPQLPGSHLSHLSMSNSKSSSTKNAAGKKVAASANPVLELVKALMQVLSLDK 2096

Query: 1827 NVQHDVLVMRKNLLKYVRVREFAPEAEFRDPCPSFILPNVICSYCNDCRDLDLCRD---M 1883
            N+  +  ++RK LL    VREF+ E  F++P  S  L    C  C   RD+DLCRD   M
Sbjct: 2097 NITLEARLLRKELLAMFDVREFSKEGAFQNPSESLKLAQFSCENCTMARDIDLCRDEDFM 2156

Query: 1884 ALLAQD------------------------WHCAMPQCGQPYDREVMENALLQIVRQRER 1919
            +  A                          W C  P C   YDR  +E  L+  V     
Sbjct: 2157 SFAAVSDVSAAGGAAGGELEGPAPGQEKGRWKC--PYCEMDYDRNEIEERLVAEVEAMVV 2214

Query: 1920 LYHLQDLVCIRCNQVKAAHLAEQCACAGSFRCKEDASDFRSKMQIFLNIANRQGFQLL 1977
             +  QDL C +C  ++     E C C+G +R      +    ++++ N+A   G ++L
Sbjct: 2215 EWTTQDLKCGKCGALRVNEFMEHCTCSGEWRELVKREEVMRWLKVYRNVARYYGLRML 2272


>gi|195109216|ref|XP_001999183.1| GI24369 [Drosophila mojavensis]
 gi|193915777|gb|EDW14644.1| GI24369 [Drosophila mojavensis]
          Length = 2260

 Score = 1349 bits (3492), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 695/1419 (48%), Positives = 958/1419 (67%), Gaps = 54/1419 (3%)

Query: 25   EELEAKLGYDLFSEGDKRLGWLLTFASSSLEDEDTRKVYSCIDLYFVSQDGSTFKSKYKF 84
            +++++K G+D   +  +R G+L+   ++ + D+D R++ + +DL+F+  DGS FK    +
Sbjct: 40   DKIDSKYGFDRVKDSQERTGYLINMHTNEVLDDD-RRLVAALDLFFIQMDGSRFKCTVAY 98

Query: 85   RPYFYAATKEKMEMDVEAYLRRRYESQIADIEILEKEDLDLKNHLSGLHKSYLKISFDTV 144
            +PY     +  M+++V  +L R+Y  QIA +E + KEDLDL NHLSGL + Y+K+SF   
Sbjct: 99   QPYLLIRPETNMQLEVARFLGRKYSGQIASLEHITKEDLDLANHLSGLKQHYIKLSFLNQ 158

Query: 145  QQLMDVKKDLLHVVERNQAKFDAAEAYESILTGKREQ-----------RPQDFLDCIVDL 193
              +  V+++L+  V RN  +  +   Y  +L     Q           R QD++DCI+D+
Sbjct: 159  TAMTKVRRELMAAVRRNMEREKSNTYYMQMLANSLAQSASGADDGSGKRQQDYMDCIMDI 218

Query: 194  REYDVPYHIRFAIDNDVRCGQWYDVSISSTG--PLLEKRVDLLQRAEVHVCAFDIETTKL 251
            RE+DVPYH+R +ID  + CGQWY++   S    P++  R D+L R E  V AFDIETTKL
Sbjct: 219  REHDVPYHVRVSIDLRIFCGQWYNIRCRSGVELPIITCRPDILDRPEPVVLAFDIETTKL 278

Query: 252  PLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNVNNEI 311
            PLKFPDA  D IMMISYM+DGQGYLI NRE +  DIED EYTPKPEFEG F + N  NE+
Sbjct: 279  PLKFPDAQTDQIMMISYMIDGQGYLITNREIISSDIEDFEYTPKPEFEGNFIIFNEENEM 338

Query: 312  ELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDKNQGECRAK 371
            +LL+ +F H+ EV+P I VTYNGD+FDWPF+ETRAA +   M +E+GF   ++ G   ++
Sbjct: 339  QLLQKFFDHIMEVRPHIVVTYNGDFFDWPFVETRAAVYDLDMKQEIGFSKMRD-GNYLSR 397

Query: 372  FACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQMMASYSV 431
             A H+DC  WVKRDSYLP GSQGLKAV KAKL YDP+E++PEDM R A E+PQ++++YSV
Sbjct: 398  PAIHMDCLCWVKRDSYLPVGSQGLKAVAKAKLRYDPVELDPEDMCRMAVEQPQVLSNYSV 457

Query: 432  SDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVICPNKH 491
            SDAVATYYLYM YVHPFIF+L TIIPM PDE+LRKGSGTLCE LLMVQAY AN++ PNKH
Sbjct: 458  SDAVATYYLYMKYVHPFIFALNTIIPMEPDEILRKGSGTLCETLLMVQAYHANIVFPNKH 517

Query: 492  QSDPEKFYR-NHLLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQLLNNLDRDLQY 550
            QS+  K     H+L+SETY+GGHVE LESGVFR+D+P  F+LDPS  +QL++++D  L++
Sbjct: 518  QSELNKLSNEGHVLDSETYVGGHVEALESGVFRADIPCRFRLDPSMVKQLMDHVDAVLKH 577

Query: 551  AIKVEGKMDLESVSNYDEVKNAIMEKLLRLQEEPIREECPLIYHLDVAAMYPNIILTNRL 610
            AI+VE  + LE VSN D+VK  I++ L  L + P R E P+IYHLDV AMYPNIILTNRL
Sbjct: 578  AIEVEEGIPLELVSNLDDVKQEIVQALQGLHDIPNRLEQPVIYHLDVGAMYPNIILTNRL 637

Query: 611  QPPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYYHLKKQIESE-FVDGTN 669
            QP ++VT+  C ACDFN+PG  C R ++W+WRGE+    R+++  +++Q+E+E F     
Sbjct: 638  QPSAMVTELDCAACDFNKPGVRCKRTMDWLWRGEMLPASRNEFQRIQQQLETEKFPPLFP 697

Query: 670  GHLSKSFLDLPKMEQQSRLKDRLKKYCQKAYKRVLDKPVTELREAGICMRENSFYVDTVR 729
            G  +++F +L K +Q +  K RL  YC+KAYK+     + E R + IC +ENSFYVDTVR
Sbjct: 698  GGPTRAFHELSKEDQAAYEKKRLSDYCRKAYKKTKITKL-ETRTSTICQKENSFYVDTVR 756

Query: 730  SFRDRRYEYKGLNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHKCILNSFYGYV 789
            +FRDRRYEYKGL K  K  ++ A ASG++ +I+ A+   VLYDSLQLAHKCILNSFYGYV
Sbjct: 757  AFRDRRYEYKGLTKTAKAAVNAAVASGDAAEIKAAKGREVLYDSLQLAHKCILNSFYGYV 816

Query: 790  MRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLPGSFPENFTFK 849
            MR+GARW+SM MAG+V  TG+ II  AR +IE++G+PLELDTDGIWC+LPGSFP+ FT  
Sbjct: 817  MRRGARWHSMPMAGIVCLTGSNIITKAREIIERVGRPLELDTDGIWCILPGSFPQEFTVH 876

Query: 850  TK-DLKKKLTISYPCVMLNVDVARNNTNDQYQTL---VDPVSKTYETHSECSIEFEVDGP 905
            T  + KKK+ ISYP  +LN  V  + TNDQY  L    +    +Y+   E SI FEVDGP
Sbjct: 877  TTHEKKKKINISYPNAVLNTMVKDHFTNDQYHELRKSAEGEPPSYDVRDENSIFFEVDGP 936

Query: 906  YKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFLHG 965
            Y AM+LPA+KEEG  +KKRYAVFN DG+LAELKGFE+KRRGEL+LIK FQ+ +F+ FL G
Sbjct: 937  YLAMVLPAAKEEGKKLKKRYAVFNFDGSLAELKGFEVKRRGELQLIKNFQSSVFEAFLAG 996

Query: 966  STIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLADYGEQKSCAVTT 1025
            ST+EECY++VA VA+ WLD+L ++G ++ DSEL + I+E+ +MSK L +YG QKS +++T
Sbjct: 997  STLEECYASVAKVADYWLDVLYSRGSNLPDSELFELIAENKSMSKKLEEYGAQKSTSIST 1056

Query: 1026 ARRLSDFLGDTMVKDKGLRCQYIVACEPQGTPVSERAVPVAIFETDAEIMKFYLRKWCK- 1084
            A+RL++FLG+ MVKD GL C+YI++ +P+G PV+ERA+P+AIF+++  + + +LR+W K 
Sbjct: 1057 AKRLAEFLGEQMVKDAGLACKYIISKKPEGAPVTERAIPLAIFQSEPSVRRHHLRRWLKD 1116

Query: 1085 -TSSDVGIRSIVDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLYKKVREKED 1143
             T  D  IR ++DW+YY +RL   IQKIITIPAA+Q ++NPVPRV HPDWL+KK+ EK D
Sbjct: 1117 NTMGDADIRDVLDWNYYIERLGGTIQKIITIPAALQGLANPVPRVQHPDWLHKKMLEKND 1176

Query: 1144 KFRQRKLVDIFSSLKKDDFLNKTCNAETNLMDENVEDLEDFPKKRRNSVNGPRPI----- 1198
              +QR++ ++F+S  +      T + +  L      D+ED   K     +G RP+     
Sbjct: 1177 VLKQRRINEMFTSRARPKPALTTEDKQLEL-----GDMEDLAGKDDADGSG-RPMVTKRK 1230

Query: 1199 -VRCFEVNNEQKTVKTTDQVDSLRQQL-EPSEVSDQQPSSQNAIDTENIDRIVDYKGWLE 1256
             V     + E    ++T Q  + RQ L  P  + + + +            IV+   W+ 
Sbjct: 1231 RVHLDGEDGEGSGGESTPQPKTWRQALGAPPAIGETRKT------------IVE---WVR 1275

Query: 1257 LKKRKWKDNLDRRKKQKLGSLRASHQANGVSESLGDMINHKEAQRRTGVGSYFRRQETAM 1316
             +KRKW    ++R++ +  S R     +  + +       +       +G + RR +  +
Sbjct: 1276 FQKRKWAWQQEQRQRCRQQSKRHRSGNDSAAAAASAQAASRATTATATLGGFLRRAQRTL 1335

Query: 1317 TRCHWQIIQLVPSSQSGVFLAWVVVEGIMVRIPITVPRLFYLN--SKDPIVEKFPGRRVN 1374
                WQI+QLVP +  G F  W ++   + RI +TVPR+FY+N  S  P  E    R+VN
Sbjct: 1336 LDQPWQILQLVPVNDLGQFNVWALIGEELHRIKLTVPRIFYVNQRSAAPPEEGQLWRKVN 1395

Query: 1375 KTLPHGRRSFNLIEVMIDEDQFRKESKKLAALLADPEVE 1413
            + LP  R  +NL    + E  FR     + A LA P++E
Sbjct: 1396 RVLPRSRPVYNLYRYSVPEQLFRDNCLGMLADLATPDIE 1434



 Score =  168 bits (425), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 88/257 (34%), Positives = 151/257 (58%), Gaps = 11/257 (4%)

Query: 1442 LARYAHILWISDDGVPDLGGTSEEDECFADEVHQPVLTY---PGAYRKVSVELKIHHLSV 1498
            L ++  +LW S    PDLGG   +D     E  + +      PG Y  V VEL +  L+V
Sbjct: 1699 LQKHNFVLWWSASTRPDLGGREADDSRLLAEFEENITVVQNRPGFYPDVCVELALDSLAV 1758

Query: 1499 NALLKSNQVNEMEGGG-LFGFD-------QDMNSGPYNNELCGFDETTSSAPAFRVVKQL 1550
            +ALL+SN++ EMEG      FD       ++M        L  +DET   + AFRV++ +
Sbjct: 1759 SALLQSNRIQEMEGASSAITFDVMPQASLEEMIGTVPAATLPSYDETALCSAAFRVMRSM 1818

Query: 1551 IQRCLTDAVTSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEFRK 1610
            +   L +   + N+F+D  + H YRW+ S ++ L+DP L R L+ +M+K+F  ++AEF++
Sbjct: 1819 VNGWLREVSINQNIFSDFQIVHFYRWVRSSNALLYDPALRRSLNNLMRKMFLRIIAEFKR 1878

Query: 1611 LGATIIFANFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLFMD 1670
            LGATI++A+F+++I+ +GK ++S A  Y D ++++L+ +E+F  I+L     W+ +L++D
Sbjct: 1879 LGATIVYADFNRIILSSGKRNVSDALGYVDYIVQSLRNKEMFHSIQLSFEQCWNFMLWLD 1938

Query: 1671 QYNYGGIPARADESLDD 1687
            Q N+ GI     + +D+
Sbjct: 1939 QSNFSGIRGSLPKGIDE 1955



 Score =  126 bits (316), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 64/178 (35%), Positives = 103/178 (57%), Gaps = 6/178 (3%)

Query: 1812 LEFIKHVCAAFALDQNVQHDVLVMRKNLLKYVRVREFAPEAEFRDPCPSFILPNVICSYC 1871
            LE I+ +    ++D+ +   +  +R+N+L+ V V EF+  A++ DPC ++I+  VIC  C
Sbjct: 2081 LELIRTLVKVLSVDKTLADQINELRRNMLRLVGVGEFSDLADWTDPCDTYIINEVICKAC 2140

Query: 1872 NDCRDLDLCRDMALLAQD----WHCAMPQCGQPYDREVMENALLQIVRQRERLYHLQDLV 1927
            N CRDLDLC+D     +D    W CA  QC   YD E +E  ++ +++++   + LQDL 
Sbjct: 2141 NHCRDLDLCKDKHRAMKDGIPVWLCA--QCYVAYDNEEIEMRMIDVLQRKLMSFVLQDLR 2198

Query: 1928 CIRCNQVKAAHLAEQCACAGSFRCKEDASDFRSKMQIFLNIANRQGFQLLQECTSWIL 1985
            C RCN++K  +LAE C CAG+F      ++    ++ F N+A+    QLLQ+     L
Sbjct: 2199 CARCNEIKRENLAEFCTCAGNFLPLIGGNEIEKLLKTFSNVASYHKMQLLQQTVQQAL 2256


>gi|392574890|gb|EIW68025.1| hypothetical protein TREMEDRAFT_33168 [Tremella mesenterica DSM 1558]
          Length = 2226

 Score = 1348 bits (3490), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 692/1452 (47%), Positives = 946/1452 (65%), Gaps = 126/1452 (8%)

Query: 2    DRRRWDRQDGRRTKKQKL--IRSAEEELEAKLGYDLF----SEGDKRLGWLLTF--ASSS 53
            +R + +R+D     +++   ++ A+E ++ KLG+  F    + G+K++GWL+    A + 
Sbjct: 37   NRSKPNREDDGTAAQERFEEVKVADE-IDEKLGFWRFESNLAAGEKKIGWLVNMHQARTL 95

Query: 54   LEDEDTRKVYSCIDLYFVSQDGSTFKSKYKFRPYFYAATKEKMEMDVEAYLRRRYESQIA 113
            ++        + +D YF+  DG  FK+   + PYFY   +   E  VE +L +R+ES + 
Sbjct: 96   IQTNSHATGLAAVDFYFIQDDGGMFKATVPYEPYFYITCRAGTERTVEEWLVKRFESLLV 155

Query: 114  DIEILEKEDLDLKNHLSGLHKSYLKISFDTVQQLMDVKKDLLHVVERNQAKFDAAEAYES 173
             +E  +K DL L NHL      +LK+ F     L  V+++LL + + N AKF A +AY  
Sbjct: 156  RVEREKKWDLSLPNHLLSAAPIFLKLFFHNTADLQAVRRELLPLAQANSAKFTAVDAYAD 215

Query: 174  ILTGK---------------------REQRPQDFLDCIVDLREYDVPYHIRFAIDNDVRC 212
            ++  +                     +++R ++ +DCI+D+RE+D+ Y++R AID DVR 
Sbjct: 216  VVGAEAQGGNGDDDEHEKAWGAEDENKKKRDREAVDCIIDIREHDIAYYLRVAIDLDVRV 275

Query: 213  GQWYDVSISSTGPL-LEKRVDLLQRAEVHVCAFDIETTKLPLKFPDADYDIIMMISYMLD 271
            G WY V+ S TG + LE+   +++RAE  V A+DIETTK PLKFPD   D IMMISYM+D
Sbjct: 276  GLWYSVT-SVTGTIKLERITSIVKRAEPVVMAYDIETTKQPLKFPDQQTDQIMMISYMID 334

Query: 272  GQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNVNNEIELLRLWFAHMQEVKPGIYVT 331
            GQGYLI NRE V EDI+D EYTP+ E+ G F V N  +E  ++R WF H++E +P +  T
Sbjct: 335  GQGYLITNREIVSEDIDDFEYTPRDEYHGDFTVFNEADEAAVIRRWFEHIRETRPTVMAT 394

Query: 332  YNGDYFDWPFLETRAAHHGFKMSEELGFQCDKNQGECRAKFACHLDCFAWVKRDSYLPQG 391
            YNGD FD+PF++ RA  HG  M + +GF+ D+   E +++   H+DCF WVKRDSYLPQG
Sbjct: 395  YNGDSFDFPFVDARAKIHGISMYDGIGFRPDQEM-EYKSRSCMHMDCFRWVKRDSYLPQG 453

Query: 392  SQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQMMASYSVSDAVATYYLYMTYVHPFIFS 451
            SQGLKAVT AKLGY P+E++PE M  +A E+PQ++A YSVSDAVATYYLYM YVHPFIFS
Sbjct: 454  SQGLKAVTTAKLGYHPIELDPELMTPYAIEQPQILAQYSVSDAVATYYLYMKYVHPFIFS 513

Query: 452  LATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVICPNKHQSDPEKFYRNHLLESETYIG 511
            L  IIP++PDEVLRKGSGTLCE LLMV+AY+A++I PN+H+      Y  HLL SETY+G
Sbjct: 514  LCNIIPLNPDEVLRKGSGTLCETLLMVEAYQAHIIMPNRHEDPHGATYEGHLLASETYVG 573

Query: 512  GHVECLESGVFRSDLPTSFKLDPSAYEQLLNNLDRDLQYAIKVEGKMDLESVSNYDEVKN 571
            GHVE LE+GVFRSD+PT FK++PSA +QL+++LD  L +++  EGK+ L+ V NYDEVK 
Sbjct: 574  GHVEALEAGVFRSDIPTHFKIEPSAVQQLIDDLDAALHFSLVEEGKLTLDDVENYDEVKK 633

Query: 572  AIMEKLLRLQEEPIREECPLIYHLDVAAMYPNIILTNRLQPPSIVTDEVCTACDFNRPGK 631
             I   L  +++EP R + PLIYHLDVAAMYPNI+L+NRLQP S+  +  C  CD+NRP K
Sbjct: 634  EIQAALELMRDEPNRFDKPLIYHLDVAAMYPNIMLSNRLQPDSVKDEAECAVCDYNRPDK 693

Query: 632  TCLRKLEWVWRGEIFMGKRSDYYHLKKQIESE-FVDGTNGHLSKSFLDLPKMEQQSRLKD 690
             C R++EW WRGE F  KR +   ++  +E E F    +    + F+DL + EQ + +  
Sbjct: 694  KCDRRMEWAWRGEYFPAKRDEVNMVRYALEQESFPPRNDFGPRRRFVDLGEAEQSALMHK 753

Query: 691  RLKKYCQKAYKRVLDKPVTELREAGICMRENSFYVDTVRSFRDRRYEYKGLNKVWKGKLS 750
            RL  Y +K YK+  D  V   + A IC RENSFY+DTVR+FRDRRYEYKGL+K WK  L 
Sbjct: 754  RLGDYSRKVYKKTHDTKVVT-KTAIICQRENSFYIDTVRAFRDRRYEYKGLHKTWKKNLD 812

Query: 751  EAKASGNSIK-IQEAQDMVVLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTG 809
            +A   G  +  + EA+ M+VLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAG+   TG
Sbjct: 813  KANEDGGGLSAVDEAKKMIVLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGITCLTG 872

Query: 810  AKIIQNARLLIEKIGKPLELDTDGIWCVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVD 869
            A IIQ AR L+E+IG+PLELDTDGIWC+LPG FPENF+FK K+  KK  ISYPC MLN  
Sbjct: 873  ATIIQMARQLVEQIGRPLELDTDGIWCMLPGVFPENFSFKLKN-GKKFGISYPCTMLNHL 931

Query: 870  VARNNTNDQYQTLVDPVSKTYETHSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFN 929
            V    TNDQY  L +P    Y   SE SI FE+DGPYKAMILP+SKEE  L+KKRYAVFN
Sbjct: 932  VHAQFTNDQYHELTNP--GQYTVKSENSIFFELDGPYKAMILPSSKEEDKLLKKRYAVFN 989

Query: 930  DDGTLAELKGFEIKRRGELKLIKVFQAELFDKFLHGSTIEECYSAVAAVANRWLDLLDNQ 989
             DG+LAELKGFE+KRRGEL+LIK+FQ+++FDKFL GST EECY+AVA+VAN+WLD+L ++
Sbjct: 990  PDGSLAELKGFEVKRRGELQLIKIFQSQIFDKFLLGSTTEECYTAVASVANQWLDILQSK 1049

Query: 990  GKDIADSELIDYISESSTMSKSLADYGEQKSCAVTTARRLSDFLGDTMVKDKGLRCQYIV 1049
               + D EL+D I+E+ +MSK+LA+YG QKS +++TARRL++FLG+ MVKDKGL C++I+
Sbjct: 1050 AASLHDEELVDLIAENRSMSKTLAEYGSQKSTSISTARRLAEFLGEQMVKDKGLSCRFII 1109

Query: 1050 ACEPQGTPVSERAVPVAIFETDAEIMKFYLRKWCKTSS--DVGIRSIVDWSYYKQRLSSA 1107
            + +P G PV+ERA+PVAIF  D +I + +LRKW K +S  D  +R+I+DW+YY +RL S 
Sbjct: 1110 SAKPNGAPVTERAIPVAIFTADPQIKRHFLRKWLKDNSLVDFDLRTILDWNYYTERLGSV 1169

Query: 1108 IQKIITIPAAMQKVSNPVPRVVHPDWLYKKVREKEDKFRQRKLVDIFSSLKKDDFLNKTC 1167
            IQK+ITIPAA+QK+ NPVPR+ HPDWL+K+V  KEDKF+Q KL D+F+ ++         
Sbjct: 1170 IQKLITIPAALQKIPNPVPRIRHPDWLFKRVAAKEDKFQQHKLTDMFAKMRS-------- 1221

Query: 1168 NAETNLMDENVEDLEDFPKKRRNSVNGPRPIVRCFEVNNEQKTVKTTDQVDSLRQQLEPS 1227
                        D+EDF  K+                        TT +   ++++++  
Sbjct: 1222 -----------VDMEDFGGKK-----------------------ITTQKTAVVKKRVKAP 1247

Query: 1228 EVSDQQPSSQNAIDTENIDRIVDYKGWLELKKRKWKDNLDRRKKQKLGSLRASHQANGVS 1287
            E++   P  Q           +DY G++ + +++W       KKQ+L   RA        
Sbjct: 1248 EIA---PDPQ-----------MDYSGYIRVMRKQW-------KKQRLERARA-------- 1278

Query: 1288 ESLGDMINHKEAQRRTG-VGSYFRRQETAMTRCHWQIIQLVPSSQSGVFLAWVVVEGIMV 1346
                     K++ R+ G V    R Q   +T   W ++Q+  + + G F  W+ ++G   
Sbjct: 1279 --------RKQSSRQDGTVSGMLRTQSLNLTSRQWDVVQMASTGKPGEFKLWLAIDGTFQ 1330

Query: 1347 RIPITVPRLFYLNSKD-PIVEKFPGR----RVNKTLPHGRRSFNLIEVMIDEDQFRKESK 1401
               + +PR FYLN K  P    F  R     V +TLP G+   +L  + +DE  F +   
Sbjct: 1331 SCRLRIPREFYLNLKTLPEEGTFSDRYETISVARTLPRGQIPRHLFRLSVDEGLFLEGES 1390

Query: 1402 KLAALLADPEVE 1413
              ++L+ +P V+
Sbjct: 1391 HFSSLINNPNVD 1402



 Score =  263 bits (673), Expect = 7e-67,   Method: Compositional matrix adjust.
 Identities = 162/573 (28%), Positives = 284/573 (49%), Gaps = 39/573 (6%)

Query: 1448 ILWISDDGVPDLGGTSEEDECFADEVHQPVLTYPGAYRKVSVELKIHHLSVNALLKSNQV 1507
            ILW S    PDLGG SEED    +E+  P ++Y G Y  V +E++I  L++N++L+S  V
Sbjct: 1657 ILWWSPTSRPDLGG-SEEDANSPEELISPHMSYKGCYSSVVLEMEIADLAINSILQSALV 1715

Query: 1508 NEMEGGGL--FGFDQ-----DMNSGPYNNELCGFDETTSSAPAFRVVKQLIQRCLTDAV- 1559
            NEMEG G     FD      D  +    N      + T S   F ++K L++    D   
Sbjct: 1716 NEMEGTGTGSLAFDSASHNLDEYAKGTANASVMLGDATLSTQTFGILKSLVRGWFLDKAR 1775

Query: 1560 ----TSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEFRKLGATI 1615
                 S +  +D ++   +RW+ SP S + +P LHR LH +M+KVF  LLAEF++LG  +
Sbjct: 1776 AHVKGSNHSPSDLVVDQFWRWISSPTSCMFEPALHRFLHGLMRKVFLQLLAEFKRLGTQV 1835

Query: 1616 IFANFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLFMDQYNYG 1675
            ++++F+++ + T K D  +A A+   L+ A  ++ELF  + ++   FW+ L +MD  N+G
Sbjct: 1836 VYSDFNRIFLLTSKPDAGSAYAFAKYLITAANSQELFRHLVIDVTQFWNYLTWMDIANFG 1895

Query: 1676 GI---PARADESLDDDSQVDIVSSWNIAEYLPKEIQDHFVLVVSEFMYIPWKHAQKLAAS 1732
            G+   P +A      + + +I   WNI  +LP  +Q  F   ++ F++  +   +  +  
Sbjct: 1896 GVKLSPGQASNRDLTNGRFEISMDWNIQSFLPGSLQPMFEKNIASFIFALYSAKRTSSNG 1955

Query: 1733 RASLQEGSSCTPSITVAAAENFESHIVQYVKGEISSYFTGKLLSIV-----RDAIHHMKK 1787
            +  L        S         +   ++  K  IS   T +LL+ V     R  +  + +
Sbjct: 1956 KEPLSIHDLNLDSEFSTGINPTKEKELKNAKKSISQTLTRRLLADVTIIKRRQTLAAVDE 2015

Query: 1788 MNNDQHNSPGVMQTAANIHKVDAPLEFIKHVCAAFALDQNVQHDVLVMRKNLLKYVRVRE 1847
            +     + P +    +   + +  LEF K +C  ++L +    ++ ++R+N+L  + VRE
Sbjct: 2016 LEAQSLSFPNL--PGSRGERKNPALEFTKAICEVYSLAKEHMVEIQILRRNVLDLLGVRE 2073

Query: 1848 FAPEAEFRDPCPSFILPNVICSYCNDCRDLDLCRD-----------MALLA---QDWHCA 1893
            F+ EA F++PC S I+  VIC  C+  RD+DLCRD           M +L+   + W C 
Sbjct: 2074 FSQEAVFKNPCESVIVSMVICKKCSFIRDVDLCRDPDRLPTVDPDTMEVLSPARKSWVCH 2133

Query: 1894 MPQCGQPYDREVMENALLQIVRQRERLYHLQDLVCIRCNQVKAAHLAEQCACAGSFRCKE 1953
              +C   YD   ++  L+ ++ +    +  QD+ C +C Q K  +++  C C GSFR   
Sbjct: 2134 --KCDAEYDSWQIQRPLISLISRMITTWQTQDVNCSKCGQSKDDNISPTCHCGGSFRSSL 2191

Query: 1954 DASDFRSKMQIFLNIANRQGFQLLQECTSWILE 1986
            +  + + K+++  ++       +  E    IL+
Sbjct: 2192 NKGEMKMKLKVIKSVCEYHELAMTGEYVDQILD 2224


>gi|347835685|emb|CCD50257.1| similar to polymerase (DNA directed) [Botryotinia fuckeliana]
          Length = 1549

 Score = 1348 bits (3489), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 693/1434 (48%), Positives = 951/1434 (66%), Gaps = 95/1434 (6%)

Query: 22   SAEEELEA-KLGYDL--------FSEGDKRLGWLLTFASSSLEDEDTRKVYSCIDLYFVS 72
            S EE++EA KLG+ +           G K++GWL+   ++++EDE   +  + +D YF+ 
Sbjct: 38   SLEEKVEAVKLGHSIDEAMGFPRHESGKKKVGWLVNIKATTIEDEKHLEGRAGVDCYFIE 97

Query: 73   QDGSTFKSKYKFRPYFYAATKEKMEMDVEAYLRRRYESQI-ADIEILEKEDLDLKNHLSG 131
             DG TFK+  ++ PYF  A K   E + E +L+R     +   I+ +EKEDL + NHL G
Sbjct: 98   DDGGTFKATVEYEPYFLVAVKRGYEPEAEEWLKRAPGGGVLKSIKRVEKEDLSMPNHLLG 157

Query: 132  LHKSYLKISFDTVQQLMDVKKDLLHVVERNQAKFDAAEAYESILTG-------------- 177
              +S+ +  F  V  L+  +KD++ V E+N+   +A + Y  + +               
Sbjct: 158  YRRSFFECRFRNVSDLLAARKDIMPVAEKNKKNMNAMDTYAEVASANAGFDLFDDSRDDD 217

Query: 178  -KREQRPQDFLDCIVDLREYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLLEKRVDLLQR 236
             +      +  D IVD+RE+DVPYH+R  ID D+R G+WY V        L+   D L R
Sbjct: 218  KRLNVSIAEGSDFIVDIREWDVPYHVRVMIDQDIRTGKWYSVEAKHGTTTLKCLEDRLAR 277

Query: 237  AEVHVCAFDIETTKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKP 296
            A+  V A+DIETTKLPLKFPDA  D IMMISYM+DGQG+LI NRE V EDIED EYTPKP
Sbjct: 278  ADPVVMAYDIETTKLPLKFPDATIDQIMMISYMIDGQGFLITNREIVSEDIEDFEYTPKP 337

Query: 297  EFEGYFKVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEE 356
            E++G F + N  +E  ++  +F H++E +P +  TYNGD+FDWPF++ RA+ +G  M  E
Sbjct: 338  EYDGPFMIFNEPDEKAVIERFFLHIKEARPTVIATYNGDFFDWPFVDARASVNGIDMYRE 397

Query: 357  LGFQCDKNQGECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMV 416
            +G++  +++ +    ++ H+DCF WV RDSYLPQGS+GLKAVT AKLGYDP E++PE M+
Sbjct: 398  IGWRRSQSEDQYICDYSAHMDCFHWVNRDSYLPQGSRGLKAVTTAKLGYDPDEIDPELML 457

Query: 417  RFAKEKPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLL 476
            R+A EKPQ +A YSVSDAVATYYLYM YVHPFIFSL TIIP+ PD VLRKG+GTLCEMLL
Sbjct: 458  RYASEKPQTLAEYSVSDAVATYYLYMKYVHPFIFSLCTIIPLGPDAVLRKGTGTLCEMLL 517

Query: 477  MVQAYKANVICPNKHQSDPEKFYRNHLLESETYIGGHVECLESGVFRSDLPTSFKLDPSA 536
            MVQAY+  ++ PNKH +  E F+  HLLESETY+GGHVE +E+GVFR+D+P +F +D +A
Sbjct: 518  MVQAYQKEIVLPNKHVTPKESFWEGHLLESETYVGGHVESIEAGVFRADIPVNFAVDTTA 577

Query: 537  YEQLLNNLDRDLQYAIKVEGKMDLESVSNYDEVKNAIMEKLLRLQEEPIREECPLIYHLD 596
             ++LL +LD  L+++I VE K  L+ + NY+EVK  I ++L  L++   R E PLIYHLD
Sbjct: 578  IDELLEDLDSALKFSITVEEKKSLDDIENYEEVKQQIADRLNSLKKTANRSENPLIYHLD 637

Query: 597  VAAMYPNIILTNRLQPPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYYHL 656
            VA+MYPNI+ TNRLQP S++ +  C ACDFNRPGKTC R++ W WRGE    KR +Y  +
Sbjct: 638  VASMYPNIMTTNRLQPDSMIQESDCAACDFNRPGKTCDRRMPWAWRGEYLPAKRDEYNMI 697

Query: 657  KKQIESEFVDGT-NGHLSKSFLDLPKMEQQSRLKDRLKKYCQKAYKRVLDKPVTELREAG 715
            +  +E+E   G       +SF DL   EQ + ++ RL+ Y QK Y ++ D+   E REA 
Sbjct: 698  RHSLENERFPGKYPKQPMRSFQDLSYEEQAALIRKRLQTYSQKIYHKIHDQTTIE-REAI 756

Query: 716  ICMRENSFYVDTVRSFRDRRYEYKGLNKVWKGKLSEAKASGN-SIKIQEAQDMVVLYDSL 774
            IC REN FY+DTV+ FRDRRY+YKG  KVWKGK    K++G  + ++++A+ M+VL+DSL
Sbjct: 757  ICQRENPFYIDTVKDFRDRRYDYKGKQKVWKGKTDALKSAGAPAAEVEDAKKMIVLFDSL 816

Query: 775  QLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGI 834
            QLAHK ILNSFYGYVMRKG+RWYSMEMAGV   TGA IIQ AR L+E+IG+PLELDTDGI
Sbjct: 817  QLAHKVILNSFYGYVMRKGSRWYSMEMAGVTCLTGAHIIQMARQLVERIGRPLELDTDGI 876

Query: 835  WCVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHS 894
            WC+LP +FPEN+ FK K+  KKL ISYPCVMLN  V    TN QYQTL DP +  YETHS
Sbjct: 877  WCMLPATFPENYAFKMKN-GKKLAISYPCVMLNHLVHDKFTNHQYQTLTDPKTFKYETHS 935

Query: 895  ECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVF 954
            + SI FEVDGPY+AMILP SKEE   +KKRYAVFNDDG+LAELKGFE+KRRGELKLIK+F
Sbjct: 936  DNSIFFEVDGPYRAMILPTSKEEDKNLKKRYAVFNDDGSLAELKGFEVKRRGELKLIKIF 995

Query: 955  QAELFDKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLAD 1014
            Q ++F  FL G+T+EE Y AVA VAN+WLD+LD++G+ +AD+ELID I E+ +MSKSL +
Sbjct: 996  QQQIFKFFLEGTTLEETYQAVAKVANQWLDVLDSKGRTLADAELIDLICENRSMSKSLEE 1055

Query: 1015 YGEQKSCAVTTARRLSDFLGDTMVKDKGLRCQYIVACEPQGTPVSERAVPVAIFETDAEI 1074
            YG QKS ++TTA+RL++FLG+ MVKDKGL C+YI+  +P+  PV+ERAVPVAIF +D  +
Sbjct: 1056 YGTQKSTSITTAKRLAEFLGEQMVKDKGLNCKYIICAKPKHAPVTERAVPVAIFSSDISV 1115

Query: 1075 MKFYLRKWCKT-SSDVGIRSIVDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDW 1133
             + +LRKW K   +D+  R+++DW YY +RL S IQK+ITIPAA+QK SNPVPRV HPDW
Sbjct: 1116 KRHFLRKWLKEDPTDMDPRALLDWDYYSERLGSVIQKLITIPAALQKCSNPVPRVAHPDW 1175

Query: 1134 LYKKVREKEDKFRQRKLVDIFSSLKKDDFLNKTCNAETNLMDENVEDLEDF------PKK 1187
            L +++R K+DK +Q+K+ D+F+    +D         +NL D  + D+EDF      PK 
Sbjct: 1176 LQRRIRIKDDKMKQKKMTDMFTKTPLEDI--------SNLQDPRMADMEDFGTQLLKPKT 1227

Query: 1188 RRNSVNGPRPIVRCFEVNNEQKTVKTTDQVDSLRQQLEP-SEVSDQQPSSQNAIDTENID 1246
              + +N              QK +K      ++   + P + + D+ PS+          
Sbjct: 1228 LGSQLNAA-----------SQKPMKRKSPEPAVAVSINPFAALPDKMPSASE-------- 1268

Query: 1247 RIVDYKGWLELKKRKWKDNLDRRKKQK--LGSLRASHQANGVSESLGDMINHKEAQRRTG 1304
               DY+G+LE +K+KWK     R +++   G  R +                     ++ 
Sbjct: 1269 ---DYEGFLEYQKQKWKIQKQARIRRRHLFGENRGA---------------------QSN 1304

Query: 1305 VGSYFRRQETAMTRCHWQIIQLVPSSQSGVFLAWVVVEGIMVRIPITVPRLFYLNSK--- 1361
            + + F+ Q   + +  WQ++QL  +   G+ LA+V+++  + R+ + VPR  +LN K   
Sbjct: 1305 IATTFQNQAEQLFKSTWQVLQLRGTESPGIVLAFVLIDSKVHRLKVKVPRTVFLNLKGKE 1364

Query: 1362 --DPIVEKFPGRRVNKTLPHGRRSFNLIEVMIDEDQFRKESKKLAALLADPEVE 1413
              D  ++     +V  TLP+G  S +L ++ + ED +  E++K++ L   P VE
Sbjct: 1365 LPDIEIDGCEAEKVTHTLPNGHPSVHLFKLTMSEDVYVNEAQKISLLFNHPSVE 1418


>gi|171679864|ref|XP_001904878.1| hypothetical protein [Podospora anserina S mat+]
 gi|170939558|emb|CAP64785.1| unnamed protein product [Podospora anserina S mat+]
          Length = 2253

 Score = 1347 bits (3485), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 688/1415 (48%), Positives = 939/1415 (66%), Gaps = 75/1415 (5%)

Query: 26   ELEAKLGYDLFSEGDKRLGWLLTFASSSLEDE--DTRKVYSCIDLYFVSQDGSTFKSKYK 83
            +++  +G+  +  G KR GWL+   ++S++D         + +D YF+ +DG TFK+   
Sbjct: 54   QIDENMGFARYDAGRKREGWLVNVQATSIDDPRIPGGGGRAALDCYFIEEDGQTFKATVD 113

Query: 84   FRPYFYAATKEKMEMDVEAYLRRRYESQIA-DIEILEKEDLDLKNHLSGLHKSYLKISFD 142
            F PYF  A ++  E +VE + +R     +   I+ +EKEDL + NHL G  +++L+I F 
Sbjct: 114  FEPYFLIACRKGHEGEVEEWCKRVPGGGVVKSIKKIEKEDLSMPNHLLGYRRTFLEIKFH 173

Query: 143  TVQQLMDVKKDLLHVVERNQAKFDAAEAYESILTGK------------REQRPQDFL--- 187
             VQ LM  ++D++ + E+N+   DA + Y  + T               +QR +      
Sbjct: 174  NVQDLMAARRDIMPIAEKNKKGMDAMDTYAEVATTNGNFDLFDDDLRRDDQRHKTSFSEA 233

Query: 188  -DCIVDLREYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLLEKRVDLLQRAEVHVCAFDI 246
             D IVD+REYDVPYH+R  ID D+R G WY V   +    + +  D L  A+  V A+DI
Sbjct: 234  SDFIVDIREYDVPYHVRVMIDLDIRVGNWYFVEAKNGVTTVIRNEDRLAPADPVVMAYDI 293

Query: 247  ETTKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTN 306
            ET K PLKFPDA  D IMMISYM+DGQG+LI NRE V EDI D +YTP+PE+ G F + N
Sbjct: 294  ETCKAPLKFPDAAVDQIMMISYMIDGQGFLITNREVVSEDIADFDYTPRPEYPGPFMIFN 353

Query: 307  VNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDKNQG 366
              +E  +L  +F H++E +P +  TYNGD+FDWPF+E RA+ +G  +  E+G++ D +  
Sbjct: 354  EPDEKSVLERFFLHIKEARPTVIATYNGDFFDWPFVEARASINGIDLYHEIGWKRDSDD- 412

Query: 367  ECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQMM 426
            + +  ++ H+DCF WV RDSYLPQGS+GLKAVT AKLGYDP E++PE M  +A+E+PQ +
Sbjct: 413  QFKCNYSVHMDCFHWVNRDSYLPQGSRGLKAVTVAKLGYDPDELDPELMTPYAQERPQTL 472

Query: 427  ASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVI 486
            A YSVSDAVATYYLYM YVHPFIFSL TI+P+ PD+ LRKG+GTLCEMLLMVQAY+  ++
Sbjct: 473  AEYSVSDAVATYYLYMKYVHPFIFSLCTILPLGPDDTLRKGTGTLCEMLLMVQAYQKGIV 532

Query: 487  CPNKHQSDPEKFYRNHLLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQLLNNLDR 546
             PNKH    E F+  HLLESETY+GGHVE +E+GVFR+D+P +F +D  A ++LL +LD 
Sbjct: 533  LPNKHVQAKESFWEGHLLESETYVGGHVESIEAGVFRADIPVTFSVDTGAVDELLRDLDA 592

Query: 547  DLQYAIKVEGKMDLESVSNYDEVKNAIMEKLLRLQEEPIREECPLIYHLDVAAMYPNIIL 606
             L+++I VE K  ++ ++NYDEVK  I+ KL+ L+E P R E PLIYHLDVA+MYPNI+ 
Sbjct: 593  ALKFSITVEEKKSMDDITNYDEVKEQIVAKLMNLKETPNRLENPLIYHLDVASMYPNIMT 652

Query: 607  TNRLQPPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYYHLKKQIESEFVD 666
            TNRLQP S++++  C ACDFNRPGKTC R+L W WRGE    KR +Y  ++  +ESE   
Sbjct: 653  TNRLQPDSMISESDCAACDFNRPGKTCDRRLPWAWRGEYLPAKRDEYNMIRHALESERFP 712

Query: 667  GTNGHL-SKSFLDLPKMEQQSRLKDRLKKYCQKAYKRVLDKPVTELREAGICMRENSFYV 725
            G   ++ ++SF +LP  EQ S ++ RL+ Y QK Y ++ D   T +REA IC REN FY+
Sbjct: 713  GKRPNMPTRSFGELPADEQASLIRKRLQLYSQKVYHKIHDS-TTIVREAIICQRENPFYI 771

Query: 726  DTVRSFRDRRYEYKGLNKVWKGKLSEAKASGNSI-KIQEAQDMVVLYDSLQLAHKCILNS 784
            DTVR FRDRRY+YKG  KVWKGK    ++SG S  ++  A+ M+VL+DSLQLAHK ILNS
Sbjct: 772  DTVRDFRDRRYDYKGKAKVWKGKTDALRSSGASASEVDHAKKMIVLFDSLQLAHKVILNS 831

Query: 785  FYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLPGSFPE 844
            FYGYVMRKG+RWYSMEMAGV   TGA IIQ AR L+E++G+PLELDTDGIWC+LP +FPE
Sbjct: 832  FYGYVMRKGSRWYSMEMAGVTCLTGATIIQLARSLVERLGRPLELDTDGIWCMLPATFPE 891

Query: 845  NFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEFEVDG 904
            NFTFK K+  KK+TISYPCVMLN  V    TN QYQTLVDP +  YETHS+ SI FEVDG
Sbjct: 892  NFTFKLKN-GKKMTISYPCVMLNHLVHDKFTNHQYQTLVDPKTFKYETHSDNSIFFEVDG 950

Query: 905  PYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFLH 964
            PYKAM+LP SKEE   +KKRYAVFNDDG+LAELKGFE+KRRGELKLIK+FQ ++F  FL 
Sbjct: 951  PYKAMVLPTSKEEDKNLKKRYAVFNDDGSLAELKGFEVKRRGELKLIKIFQQQIFKFFLD 1010

Query: 965  GSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLADYGEQKSCAVT 1024
            G+T+ ECY+AVA VANRWLD+LD++G  +AD EL++ ISE+ +M+K+L +YG QKS ++T
Sbjct: 1011 GTTLAECYTAVAKVANRWLDVLDSKGTTLADEELMELISENRSMTKTLEEYGSQKSTSIT 1070

Query: 1025 TARRLSDFLGDTMVKDKGLRCQYIVACEPQGTPVSERAVPVAIFETDAEIMKFYLRKWCK 1084
            TA+RL+DFLG+ MVKDKGL C++I+   P+G PV+ERAVPVAIF  + E  + YL+KW K
Sbjct: 1071 TAKRLADFLGEAMVKDKGLNCKFIICARPKGAPVTERAVPVAIFSAEEETKRMYLKKWLK 1130

Query: 1085 TS-SDVGIRSIVDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLYKKVREKED 1143
               +D   R+++DW YY++RL S IQK+ITIPAA+QKV NPVPR+ HPDWL +++  K+D
Sbjct: 1131 EEPADTDPRALLDWEYYRERLGSVIQKLITIPAALQKVRNPVPRIPHPDWLQRRINIKDD 1190

Query: 1144 KFRQRKLVDIFSSLKKDDFLNKTCNAETNLMDENVEDLEDFPKKRRNSVNGPRPIVRCFE 1203
            K +Q+KL D+F    K     +  N  TN +  ++ED+ D  K        P+ +     
Sbjct: 1191 KMKQKKLTDLFGPTTK-----RPLNDITNQLG-DLEDIGDLLK--------PKTVTSAIA 1236

Query: 1204 VNNEQKTVKTTDQVDSLRQQLEPSEVSDQQPSSQNAIDTENIDRIVDYKGWLELKKRKWK 1263
             +  QK + +       R+  EP E     P +  A+  +  D   DY  +LE +K+KWK
Sbjct: 1237 AS--QKVLASHK-----RKSPEPEE----DPFA--ALPKKMPDPSEDYPAFLEYQKQKWK 1283

Query: 1264 DNLDRRKKQKLGSLRASHQANGVSESLGDMINHKEAQRRTGVGSYFRRQETAMTRCHWQI 1323
                 R +++                   +   +    +  +   FR Q     R  WQ+
Sbjct: 1284 LQKQARARRR------------------HLFGERRGNAQNSLQQTFRNQAEVTFRNTWQV 1325

Query: 1324 IQLVPSSQSGVFLAWVVVEGIMVRIPITVPRLFYLNSK-----DPIVEKFPGRRVNKTLP 1378
            +QL  +   G+ +A+V+++  +  + I V R  +LN K     D  ++     +VN TLP
Sbjct: 1326 LQLKATDMPGIVIAYVLIDNKIHTVKINVQRQVFLNLKSKELPDIEIDGCQVEQVNHTLP 1385

Query: 1379 HGRRSFNLIEVMIDEDQFRKESKKLAALLADPEVE 1413
            +G  S +L ++ + E+ +  E++K + L   P VE
Sbjct: 1386 NGHSSVHLFKLTVPEEIYFAEAEKFSLLFNHPSVE 1420



 Score =  241 bits (615), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 166/646 (25%), Positives = 293/646 (45%), Gaps = 79/646 (12%)

Query: 1408 ADPEVEVLGWQQNAAKIGMQRCAASSQWFNERISLARYAHI------------------- 1448
            AD  +  LGWQ   A+  +    +   W     +LA+Y  +                   
Sbjct: 1618 ADSSLPPLGWQTVVARRLVNHYLSLGSWITHLTALAKYGDVPLCNLERDDPRFLIDVAYA 1677

Query: 1449 ---------LWISDDGVPDLGGTSEEDECFA-DEVHQPVLTYPGAYRKVSVELKIHHLSV 1498
                     LW S    PD  G  ++D     D+V  P +  PG Y  V +++++ +L +
Sbjct: 1678 RRLQANSVVLWWSPSPRPDHAGYEKDDVVGPLDQVQMPSVNTPGTYASVCIDIEVRNLGI 1737

Query: 1499 NALLKSNQVNEMEGGGLFGFDQDMNSGPYNNELCGFDETTSSAPAF-----RVVKQLIQR 1553
            N +L S+ +NE+EG     F+   + G       G +E+  S  AF     +V++++++ 
Sbjct: 1738 NTILTSSLINELEGADSISFNPAGDGG-------GGEESFQSENAFANAGVQVLREMVKS 1790

Query: 1554 CLTDAVTSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEFRKLGA 1613
               +A   G+  AD ++QHL RW+ SP S L+D  LH  +  + +K    L+A+FR++G+
Sbjct: 1791 WWAEAC-KGSTMADIMVQHLIRWVESPASCLYDRALHYYVQMMSRKALLQLMADFRRVGS 1849

Query: 1614 TIIFANFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLFMDQYN 1673
             +++A+ +++++ T K ++  A AY   +LK+++ + LF +I+LE   +W  L++ D++N
Sbjct: 1850 HVVYASANRLLLQTTKSEVGNAYAYSQYILKSIKAKPLFHFIDLEIKEYWDYLVWYDEFN 1909

Query: 1674 YGGIPARADESLDDDSQ-VDIVSSWNIAEYLPKEIQDHFVLVVSEFMYI------PWKHA 1726
            YGG      E L+ D Q + ++  W IA +LP  +Q  F   V EF+ +      P   +
Sbjct: 1910 YGG--KACQEVLEKDEQDLQMIMHWQIATFLPVRLQPVFRDWVVEFIELMHGIKRPANGS 1967

Query: 1727 QKLAASRA--------SLQEGSSCTPSIT--VAAAENFESHIVQYVKGEISSY------- 1769
               A  R         S Q+     P+    +   +NFE  + + + G I +        
Sbjct: 1968 DPTATPRMTQLPFRGDSTQQADDKVPTGANQIILGKNFEKPLKKEILGLIQAQKREMLHP 2027

Query: 1770 -FTGKLLSIVRDAIHHMKKMNNDQHNSPGVMQTAANIHKVDAPLEFIKHVCAAFALDQNV 1828
                     V    +  + + +     P   ++A+     +  LE +K +    +LD+N+
Sbjct: 2028 ELANDYSFPVLPGSYLPQLLPSSASTGPAHKKSASAKPTANPILELVKALMQVLSLDKNI 2087

Query: 1829 QHDVLVMRKNLLKYVRVREFAPEAEFRDPCPSFILPNVICSYCNDCRDLDLCRDMALL-- 1886
              +  ++RK LL    VREF+ E +F +P  S  +  + C  C   RDLDLCRD  L+  
Sbjct: 2088 TLEARLLRKELLALFDVREFSKEGQFLNPSESLKITQLSCENCTMTRDLDLCRDEDLMPL 2147

Query: 1887 ------AQDWHCAMPQCGQPYDREVMENALLQIVRQRERLYHLQDLVCIRCNQVKAAHLA 1940
                  A+ W C    C   YDR  +E  L+  V      +  QDL C +C   +     
Sbjct: 2148 PDEEPQAKRWACQY--CEAEYDRNAIEERLVGEVEGIVVEWTCQDLKCGKCGAARVNEFM 2205

Query: 1941 EQCACAGSFRCKEDASDFRSKMQIFLNIANRQGFQLLQECTSWILE 1986
            E C C+G +R      +   +++++  +A   G ++LQ+    I E
Sbjct: 2206 EHCTCSGEWRESVKREEVMRRLRVYKRVAGFYGLRMLQDVVGEIWE 2251


>gi|320580522|gb|EFW94744.1| DNA-directed DNA polymerase epsilon, catalytic subunit A [Ogataea
            parapolymorpha DL-1]
          Length = 2182

 Score = 1346 bits (3484), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 688/1410 (48%), Positives = 932/1410 (66%), Gaps = 80/1410 (5%)

Query: 25   EELEAKLGYDLFSEGDKRLGWLLTFASSSLEDEDTRKVYSCIDLYFVSQDGSTFKSKYKF 84
            + +++  G+D +S G KR+GWL+    ++L   +     S +D YF+ ++G +FK+  ++
Sbjct: 47   DRIDSVFGFDRYSSGAKRVGWLVNMHPTTLPTTENIAGCSGVDYYFLDEEGGSFKASVQY 106

Query: 85   RPYFYAATKEKMEMDVEAYLRRRYESQIADIEILEKEDLDLKNHLSGLHKSYLKISFDTV 144
             PYF    +     +VE YLR+  E  +  +  +EKEDL L NHL GL +  L++SF  V
Sbjct: 107  DPYFLLMVQTDRATEVEEYLRKFLEGTLKKLSWVEKEDLALTNHLVGLKRQLLQLSFHNV 166

Query: 145  QQLMDVKKDLLHVVERNQAKFDAAEAYESILTG------------KREQRPQDFLDCIVD 192
              L++ ++ L  ++++N++  ++ + Y+S+               + E++  +  D I D
Sbjct: 167  SDLLEARRQLQPIIQQNKSTKNSKDIYQSVNMNYNTFMKHHDGHEEAERKVGNITDLIED 226

Query: 193  LREYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLLEKRVDLLQRAEVHVCAFDIETTKLP 252
            +REYDVPYH+R +ID ++R G+WY V        LE+R D L  A+  V AFDIETTK P
Sbjct: 227  IREYDVPYHVRVSIDCNIRVGKWYTVEADQGKVRLEERADKLAFADPVVLAFDIETTKAP 286

Query: 253  LKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNVNNEIE 312
            LKFPD+  D IMMISYM+DG+GYLI NRE + EDIED EYTPKPE+ GYF + N  NE  
Sbjct: 287  LKFPDSSVDQIMMISYMIDGEGYLITNREIISEDIEDFEYTPKPEYPGYFTIFNEPNERH 346

Query: 313  LLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDKNQGECRAKF 372
            +++ +F H+++ +P +  T+NGD+FDWPF+E RAA+H   M +E+GF  D ++GE ++ +
Sbjct: 347  VIQRFFEHVRDTRPTVIATFNGDFFDWPFVEARAAYHDIDMYKEIGFAKD-SEGEYKSTY 405

Query: 373  ACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQMMASYSVS 432
              H+DCF WVKRDSYLPQGSQGLKAVT  KLGY+P E++PE M  +A EKPQ++A YSVS
Sbjct: 406  CVHMDCFRWVKRDSYLPQGSQGLKAVTTVKLGYNPTELDPELMTPYAYEKPQLLAEYSVS 465

Query: 433  DAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVICPNKHQ 492
            DAVATYYLY  YVHPFIFSL TIIP++PDEVLRKG+GTLCEMLLMVQAY+  ++ PNKH 
Sbjct: 466  DAVATYYLYYKYVHPFIFSLCTIIPLNPDEVLRKGTGTLCEMLLMVQAYQNGILLPNKHT 525

Query: 493  SDPEKFYRNHLLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQLLNNLDRDLQYAI 552
               E+FY  HLLESETY+GGHVE LE+GVFR+DL T F +DP+A +++LN+LD  L+++I
Sbjct: 526  DPLERFYDGHLLESETYVGGHVESLEAGVFRADLATDFNVDPAAVDEILNDLDNALKFSI 585

Query: 553  KVEGKMDLESVSNYDEVKNAIMEKLLRLQEEPIREECPLIYHLDVAAMYPNIILTNRLQP 612
             VE K  LE V+NY+EV   I  KL+ L+    R E PLIYH+DVA+MYPNI+ TNRLQP
Sbjct: 586  TVEEKKKLEDVTNYNEVCAEIRAKLIELKTNNKRTETPLIYHVDVASMYPNIMTTNRLQP 645

Query: 613  PSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYYHLKKQIESE-FVDGTNGH 671
             S+ T++ C +CDFNRPGKTC R+L W WRGE +  + ++Y  +K  +++E F     G 
Sbjct: 646  DSMKTEKDCASCDFNRPGKTCDRRLPWAWRGEFYPAEANEYNMIKNALKNEQFAPKHPGL 705

Query: 672  LSKSFLDLPKMEQQSRLKDRLKKYCQKAYKRVLDKPVTELREAGICMRENSFYVDTVRSF 731
              ++F +L   EQ   +K R+  Y +K Y R+      E REA IC REN FYV+TVR F
Sbjct: 706  PRRTFEELSYTEQVGHIKKRVSDYSRKVYHRIKATETVE-REAIICQRENPFYVNTVRDF 764

Query: 732  RDRRYEYKGLNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHKCILNSFYGYVMR 791
            RDRRYE+KGL KVWKGK+++     +   + EA+ MVVLYDSLQLAHK ILNSFYGYVMR
Sbjct: 765  RDRRYEFKGLAKVWKGKVAQI-GRDDKNAVDEAKKMVVLYDSLQLAHKVILNSFYGYVMR 823

Query: 792  KGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLPGSFPENFTFKTK 851
            KG+RWYSMEMAGV   TGA IIQ AR L+E++G+PLELDTDGIWC+LP SFPE+F F  K
Sbjct: 824  KGSRWYSMEMAGVTCLTGATIIQMARSLVERLGRPLELDTDGIWCILPSSFPEDFKFTLK 883

Query: 852  DLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEFEVDGPYKAMIL 911
            +  K  T+SYPC MLN  V +  TN QYQ LVDPV   YET S+ SI FEVDGPYKAM+L
Sbjct: 884  N-GKSFTVSYPCSMLNYLVHQRFTNHQYQMLVDPVRLKYETISDNSIFFEVDGPYKAMVL 942

Query: 912  PASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFLHGSTIEEC 971
            P SKEEG  +KKRYAVFN DG+LAELKGFE+KRRGEL+LIK FQ+++F  FL G+++EEC
Sbjct: 943  PTSKEEGKGLKKRYAVFNFDGSLAELKGFELKRRGELQLIKNFQSDIFKLFLEGNSLEEC 1002

Query: 972  YSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLADYGEQKSCAVTTARRLSD 1031
            Y AVA +ANRWLD+LD++G+ + D +LI+ I E+ +MSK+L +YG QKS ++TTARRL +
Sbjct: 1003 YQAVANIANRWLDVLDSRGQMLEDEDLIELICENRSMSKTLEEYGGQKSTSITTARRLGE 1062

Query: 1032 FLGDTMVKDKGLRCQYIVACEPQGTPVSERAVPVAIFETDAEIMKFYLRKWCKTSS--DV 1089
            FLG+ MVKDKGL C+Y++A  P   P++ERA+P AIF +D  + + YLR+W    S  D+
Sbjct: 1063 FLGEEMVKDKGLACKYVIADRPIDAPITERAIPTAIFSSDIAVKRKYLRRWLVDPSLEDL 1122

Query: 1090 GIRSIVDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLYKKVREKEDKFRQRK 1149
              RSI+DW YYK+RL+S IQKIITIPAA+Q VSNPVPRV HPDWL K++  KEDK +Q  
Sbjct: 1123 DPRSIIDWGYYKERLASVIQKIITIPAALQGVSNPVPRVSHPDWLQKRINTKEDKMKQSS 1182

Query: 1150 LVDIFSSLKKDDFLNKTCNAETNLMDENVEDLEDFPKKRRNSVNGPRPIVRCFEVNNEQK 1209
            L    S+  K   ++   N         V+D+ED            RP           K
Sbjct: 1183 L----SAFLKKGVMSDVTN--------QVQDIEDL------GTGAARP-----------K 1213

Query: 1210 TVKTTDQVDSL-RQQLEPSEVSDQQPSSQNAIDTENIDRIVDYKGWLELKKRKWKDNLDR 1268
              K T +   L R+ LE S+   QQ ++Q   D      + DY G+L+ +K KW+     
Sbjct: 1214 VGKVTCRKRKLARETLEESQ---QQLANQPCPDP-----LTDYAGFLQYQKIKWEVQAKE 1265

Query: 1269 RKKQKLGSLRASHQANGVSESLGDMINHKEAQRRTGVGSYFRRQETAMTRCHWQIIQLVP 1328
            R+++K        +  G +  LG          R  V +  R++        WQ++Q   
Sbjct: 1266 RERRK--------RLFGETAQLGS---------RMSVANMVRKRAENYAESTWQVLQYCE 1308

Query: 1329 SSQS-GVFLAWVVVEGIMVRIPITVPRLFYLNSK-----DPIVEKFPGRRVNKTLPHGRR 1382
            S+ + G   A+V++ G +  + + VP+  YL+ K     D ++E     R  + LP G++
Sbjct: 1309 STDNPGDLKAYVLINGKIHTLTLHVPKKLYLDFKSEPFPDTVLESCEVTRAAELLPSGQK 1368

Query: 1383 SFNLIEVMIDEDQFRKESKKLAALLADPEV 1412
            S NL ++++  D + +E  K   LL  P V
Sbjct: 1369 SANLFKMVMSHDVYSREISKTNGLLNSPHV 1398



 Score =  251 bits (640), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 167/612 (27%), Positives = 294/612 (48%), Gaps = 72/612 (11%)

Query: 1412 VEVLGWQQNAAKIGMQRCAASSQWFNERISLARYAHI----------------------- 1448
            +  L W     K  +    + + W  + ISLARY++I                       
Sbjct: 1593 INSLSWHSLIMKRIINHYLSVAGWLQKIISLARYSNIPLCNLEIDNLGYMIDIEYARKLS 1652

Query: 1449 -----LWISDDGVPDLGGTSEEDECFADEVHQ-PVLTYPGAYRKVSVELKIHHLSVNALL 1502
                 LW S    PDLGG  E+D    DE  + PV+     Y  V +EL++ +L++N +L
Sbjct: 1653 QANIVLWWSPTPNPDLGGV-EKDTFAVDESFEFPVINQSEVYESVCLELELKNLTINTVL 1711

Query: 1503 KSNQVNEMEGGGLFGFDQDMNSGPYNNELCGFDETTSSAPAFRVVKQLIQRCLTDAVTSG 1562
             S+ +NE EG  +F        G        F E + S PA  V++ L++    DA+ + 
Sbjct: 1712 TSSLINEAEG--VFSSTDAAAEG-------AFAEDSFSGPALVVLRSLVRTWWDDAIKN- 1761

Query: 1563 NVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEFRKLGATIIFANFSK 1622
            N  AD+++     W  +P S L+D  LH  +H + +K F  LL EF+K+G+ ++FA+ ++
Sbjct: 1762 NSEADSMVHGFVSWCQNPASFLYDSSLHYHVHNLTKKSFIQLLGEFKKMGSAVVFADRNR 1821

Query: 1623 VIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLFMDQYNY-GGIPARA 1681
            VI++T K  +  + AY   +L +++   LF +++L+ V +W  L++MD+YNY G    + 
Sbjct: 1822 VIVETSKTAVENSYAYSQYILTSVRASPLFNYLDLQVVKYWDLLVWMDKYNYMGRFCHQV 1881

Query: 1682 DESLDDDSQVDIVSSWNIAEYLPKEIQDHFVLVVSEFMYIPWKHAQKLAASR----ASLQ 1737
             E+  +  +++ VS+W +  YLP        ++ SEF    W     L   R     +L 
Sbjct: 1882 QEA--EVQKLEAVSNWQLKSYLPP-------ILHSEFEEWTWLILDSLIKHRDGRFKNLS 1932

Query: 1738 EGSSCTPSITVA---AAENFESHIVQYVKGEISSYFTGKLLSIVRDAIHHMKKMNNDQHN 1794
            + +  TP    A     +  +   +  V   +   F   LL      +H + K  N+   
Sbjct: 1933 QSTQLTPDRKAALKKIKDQKDEDALDTVANGVCELFRAPLLK----RLHTLIKKQNEVGL 1988

Query: 1795 SPGVMQT-------AANIHKVDAPLEFIKHVCAAFALDQNVQHDVLVMRKNLLKYVRVRE 1847
             PG+M+         +++   +  LE  K++C    L +    +V ++RK +L    ++E
Sbjct: 1989 DPGIMEQYQFPVLPGSHLEMSNPTLELTKYLCHILGLSKKRNIEVRLLRKEILSLFEIKE 2048

Query: 1848 FAPEAEFRDPCPSFILPNVICSYCNDCRDLDLCRDMALLAQDWHCAMPQCGQPYDREVME 1907
            F+ E  F++P  S +LP+VICSYCN  +D+D+CRD   +   WHC    C +PY++ ++E
Sbjct: 2049 FSDEGVFKNPAASLVLPHVICSYCNHIKDVDVCRDEPHVL--WHCE--GCNKPYNKLLLE 2104

Query: 1908 NALLQIVRQRERLYHLQDLVCIRCNQVKAAHLAEQCACAGSFRCKEDASDFRSKMQIFLN 1967
              L+  + +    +  QDL C +C + K   +   C+C+G++       D  ++++++ N
Sbjct: 2105 ERLISELNRLLFRFLTQDLKCAKCGKTKDREIMAHCSCSGTWTQTVSIKDVVAQLRLYRN 2164

Query: 1968 IANRQGFQLLQE 1979
            +A     +LL E
Sbjct: 2165 VALAHDLKLLLE 2176


>gi|156039593|ref|XP_001586904.1| hypothetical protein SS1G_11933 [Sclerotinia sclerotiorum 1980]
 gi|154697670|gb|EDN97408.1| hypothetical protein SS1G_11933 [Sclerotinia sclerotiorum 1980 UF-70]
          Length = 2171

 Score = 1345 bits (3481), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 692/1434 (48%), Positives = 947/1434 (66%), Gaps = 95/1434 (6%)

Query: 22   SAEEELEA---------KLGYDLFSEGDKRLGWLLTFASSSLEDEDTRKVYSCIDLYFVS 72
            S EE+LEA          +G+     G K++GWL+   ++++EDE   +  + +D YF+ 
Sbjct: 38   SLEEKLEAVKLGHSVDEAMGFPRHESGKKKIGWLVNIKATTIEDEKHLEGRAGVDCYFIE 97

Query: 73   QDGSTFKSKYKFRPYFYAATKEKMEMDVEAYLRRRYESQIA-DIEILEKEDLDLKNHLSG 131
             DG TFK+  ++ PYF  A K   E + E +L+R     +   I+ +EKEDL + NHL G
Sbjct: 98   DDGGTFKATVEYEPYFLVAVKWGYEPEAEEWLKRAPGGGVVKSIKRVEKEDLSMPNHLLG 157

Query: 132  LHKSYLKISFDTVQQLMDVKKDLLHVVERNQAKFDAAEAYESILTG-------------- 177
              +++ +  F  V  L+  +KD++ V E+N+   +A + Y  + +               
Sbjct: 158  YRRTFFECRFRNVSDLLAARKDIMPVAEKNKKNMNAMDTYAEVASANAGFDLFDDSRDDD 217

Query: 178  -KREQRPQDFLDCIVDLREYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLLEKRVDLLQR 236
             +      +  D IVD+RE+DVPYH+R  ID D+R G+WY V        L+   D L R
Sbjct: 218  KRLNVSVAEGSDFIVDIREWDVPYHVRVMIDQDIRTGKWYSVEAKHGTTKLKCLEDRLAR 277

Query: 237  AEVHVCAFDIETTKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKP 296
            A+  V A+DIETTKLPLKFPDA  D IMMISYM+DGQG+LI NRE V EDIED EYTPKP
Sbjct: 278  ADPVVMAYDIETTKLPLKFPDATIDQIMMISYMIDGQGFLITNREIVSEDIEDFEYTPKP 337

Query: 297  EFEGYFKVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEE 356
            E++G F + N  +E  ++  +F H++E +P +  TYNGD+FDWPF++ RA+ +G  M  E
Sbjct: 338  EYDGPFMIFNEPDEKAVIERFFLHIKEARPTVIATYNGDFFDWPFVDARASVNGIDMYRE 397

Query: 357  LGFQCDKNQGECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMV 416
            +G++  +++ +    ++ H+DCF WV RDSYLPQGS+GLKAVT AKLGYDP E++PE M+
Sbjct: 398  IGWRRSQSEDQYICDYSAHMDCFHWVNRDSYLPQGSRGLKAVTTAKLGYDPDEIDPELML 457

Query: 417  RFAKEKPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLL 476
            R+A EKPQ +A YSVSDAVATYYLYM YVHPFIFSL TIIP+ PD VLRKG+GTLCEMLL
Sbjct: 458  RYASEKPQTLAEYSVSDAVATYYLYMKYVHPFIFSLCTIIPLGPDAVLRKGTGTLCEMLL 517

Query: 477  MVQAYKANVICPNKHQSDPEKFYRNHLLESETYIGGHVECLESGVFRSDLPTSFKLDPSA 536
            MVQAY+  ++ PNKH S  E F+  HLLESETY+GGHVE +E+GVFR+D+P +F +D +A
Sbjct: 518  MVQAYQKEIVLPNKHVSPKESFWEGHLLESETYVGGHVESIEAGVFRADIPVNFAVDTTA 577

Query: 537  YEQLLNNLDRDLQYAIKVEGKMDLESVSNYDEVKNAIMEKLLRLQEEPIREECPLIYHLD 596
             ++LL +LD  L+++I VE K  L+ + NY+EVK  I ++L  L++   R E PLIYHLD
Sbjct: 578  IDELLEDLDAALKFSITVEEKKSLDDIDNYEEVKQQITDRLTSLKKTANRSEKPLIYHLD 637

Query: 597  VAAMYPNIILTNRLQPPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYYHL 656
            VA+MYPNI+ TNRLQP S++ +  C ACDFNRPGKTC R++ W WRGE    KR +Y  +
Sbjct: 638  VASMYPNIMTTNRLQPDSMIQESDCAACDFNRPGKTCDRRMPWAWRGEYLPAKRDEYLMI 697

Query: 657  KKQIESEFVDGT-NGHLSKSFLDLPKMEQQSRLKDRLKKYCQKAYKRVLDKPVTELREAG 715
            +  +E+E   G      S++F DL   EQ   ++ RL+ Y QK Y ++ D+   E REA 
Sbjct: 698  RHSLENERFPGKYPNQPSRTFQDLSYEEQAGLIRKRLQTYSQKIYHKIHDQTTIE-REAI 756

Query: 716  ICMRENSFYVDTVRSFRDRRYEYKGLNKVWKGKLSEAKASGN-SIKIQEAQDMVVLYDSL 774
            IC REN FY+DTV+ FRDRRY+YKG  KVWKGK    K++G  + ++++A+ M+VL+DSL
Sbjct: 757  ICQRENPFYIDTVKDFRDRRYDYKGKQKVWKGKTDALKSAGAPAAEVEDAKKMIVLFDSL 816

Query: 775  QLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGI 834
            QLAHK ILNSFYGYVMRKG+RWYSMEMAGV   TGA IIQ AR L+E+IG+PLELDTDGI
Sbjct: 817  QLAHKVILNSFYGYVMRKGSRWYSMEMAGVTCLTGAHIIQMARQLVERIGRPLELDTDGI 876

Query: 835  WCVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHS 894
            WC+LP +FPEN+ FK K   KKL ISYPCVMLN  V    TN QYQTL DP +  YETHS
Sbjct: 877  WCMLPATFPENYAFKMKS-GKKLAISYPCVMLNHLVHDKFTNHQYQTLTDPKTFKYETHS 935

Query: 895  ECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVF 954
            + SI FEVDGPY+AMILP SKEE   +KKRYAVFNDDG+LAELKGFE+KRRGELKLIK+F
Sbjct: 936  DNSIFFEVDGPYRAMILPTSKEEDKNLKKRYAVFNDDGSLAELKGFEVKRRGELKLIKIF 995

Query: 955  QAELFDKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLAD 1014
            Q ++F  FL G+T+EE Y AVA VAN+WLD+LD++GK +AD+ELID I E+ +MSKSL +
Sbjct: 996  QQQIFKFFLEGTTLEETYQAVAKVANQWLDVLDSKGKTLADAELIDLICENRSMSKSLEE 1055

Query: 1015 YGEQKSCAVTTARRLSDFLGDTMVKDKGLRCQYIVACEPQGTPVSERAVPVAIFETDAEI 1074
            YG QKS ++TTA+RL++FLG+ MVKDKGL C+YI+  +P+  PV+ERAVPVAIF +D  +
Sbjct: 1056 YGSQKSTSITTAKRLAEFLGEQMVKDKGLNCKYIICAKPRHAPVTERAVPVAIFSSDISV 1115

Query: 1075 MKFYLRKWCKTS-SDVGIRSIVDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDW 1133
             + +LRKW K   +D+  R+++DW YY +RL S IQK+ITIPAA+QK SNPVPRV HPDW
Sbjct: 1116 KRHFLRKWLKEDPTDMDPRALLDWDYYSERLGSVIQKLITIPAALQKCSNPVPRVAHPDW 1175

Query: 1134 LYKKVREKEDKFRQRKLVDIFSSLKKDDFLNKTCNAETNLMDENVEDLEDF------PKK 1187
            L +++R K+DK +Q+K+ D+F+    +D         +NL D  + D+EDF      PK 
Sbjct: 1176 LQRRIRIKDDKMKQKKMTDMFAKTPLEDI--------SNLQDPRMADMEDFGTQLLKPKT 1227

Query: 1188 RRNSVNGPRPIVRCFEVNNEQKTVKTTDQVDSLRQQLEP-SEVSDQQPSSQNAIDTENID 1246
              + +N              QK +K      ++   + P + + ++ PS           
Sbjct: 1228 LGSQLNAA-----------SQKPMKRKSPEPAVAVSINPFAALPEKMPSPSE-------- 1268

Query: 1247 RIVDYKGWLELKKRKWKDNLDRRKKQK--LGSLRASHQANGVSESLGDMINHKEAQRRTG 1304
               DY+G+LE +K+KWK     R +++   G  R +                     ++ 
Sbjct: 1269 ---DYEGFLEYQKQKWKIQKQARIRRRHLFGENRGA---------------------QSN 1304

Query: 1305 VGSYFRRQETAMTRCHWQIIQLVPSSQSGVFLAWVVVEGIMVRIPITVPRLFYLNSK--- 1361
            + + F+ Q   + +  WQ++QL  +   GV LA+V+++  +  + + VPR  +LN K   
Sbjct: 1305 IATTFQNQAEQLFKSTWQVLQLRGTESPGVVLAFVLIDSKVHTLKVKVPRTVFLNLKGRE 1364

Query: 1362 --DPIVEKFPGRRVNKTLPHGRRSFNLIEVMIDEDQFRKESKKLAALLADPEVE 1413
              D  ++     +V+ TLP+G  S +L ++ + ED +  E++K++ L   P VE
Sbjct: 1365 LPDIEIDGCEAEKVSHTLPNGHPSVHLFKLTMSEDVYVNEAQKISLLFNHPSVE 1418



 Score =  203 bits (517), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 144/566 (25%), Positives = 264/566 (46%), Gaps = 55/566 (9%)

Query: 1403 LAALLADPEVEVLGWQQNAAKIGMQRCAASSQWFNERISLARYAHI-------------- 1448
            L + + D ++  L WQ   AK  +    +  +W      LARY  +              
Sbjct: 1610 LKSDIQDSKLPPLNWQSVIAKRLVNHYLSLGEWVVHLTELARYGDVPLCNLERDDPRFLI 1669

Query: 1449 --------------LWISDDGVPDLGGTSEEDECFA-DEVHQPVLTYPGAYRKVSVELKI 1493
                          LW S    PD  G   +D     D V  P +  PG Y  V +EL +
Sbjct: 1670 DVAYARRLQKNNVVLWWSAGPKPDHAGYELDDVLGGLDTVQMPSVNNPGTYPSVCIELDV 1729

Query: 1494 HHLSVNALLKSNQVNEMEGGGLFGFDQDMNS--GPYNNELCGFDETTSSAPAFRVVKQLI 1551
             +L++N +L S+ +NE+EG     F+    S   P +     + E   +     V+++++
Sbjct: 1730 RNLAINTILTSSLINELEGSDSISFNPAAPSDDAPSDGTNVLYAENAFATAGVTVLREMV 1789

Query: 1552 QRCLTDAVTSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEFRKL 1611
            +   T+A   G+  AD ++QHL RW+ +P S L+D  L+  +  + +K F  L+ +FR++
Sbjct: 1790 KAWWTEAC-KGSSMADIMVQHLVRWVENPDSFLYDRSLNYYVQMMSRKAFQQLMTDFRRV 1848

Query: 1612 GATIIFANFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLFMDQ 1671
            G+ ++FAN +++++ T K ++  A AY   +LK+++ + LF +++LE   +W  L++ D+
Sbjct: 1849 GSHVVFANSNRLLLQTTKAEVGNAYAYSQYILKSIKAKPLFHFLDLEIKEYWDYLVWYDE 1908

Query: 1672 YNYGGIPARADESLDDDSQ-VDIVSSWNIAEYLPKEIQDHFVLVVSEFMYIPWKHAQKLA 1730
            +NYGG      E ++ ++Q +D +  W ++ +LP+++Q  F   V EF+ I       L 
Sbjct: 1909 FNYGG--KGCSEVVEAENQKLDNIMHWQLSNFLPEKLQQIFNDWVLEFIDI----MHGLK 1962

Query: 1731 ASRASLQEGSSCTPSITVAAAENFESHIVQYVKGEISSYFTGKLLSIVR---DAIHHMKK 1787
              R  +      T        E+ E  ++  +          ++  I+R   D + H + 
Sbjct: 1963 KPRLGIDSTPRATQLPVRNLGEDKEDKVI--LGKSFEKPLKKQIAGIIRRQKDEMLHPEL 2020

Query: 1788 MNNDQHNSPGVMQTAANIHKVDAPLEFIKHVCAAFALDQNVQHDVLVMRKNLLKYVRVRE 1847
              +  +  P  +   +++   +  LE +K +    +LD+N+  +  ++RK LL+   +RE
Sbjct: 2021 AED--YKFP--ILPGSHLKPTNPALELVKSLMQVLSLDKNITLEARLLRKELLEMFEIRE 2076

Query: 1848 FAPEAEFRDPCPSFILPNVICSYCNDCRDLDLCRDMALLAQD-----WHCAMPQCGQPYD 1902
            F+  A+F++P  S  L +V+C  C   RD+D CRD  LL        W CA   C   ++
Sbjct: 2077 FSHAAKFQNPSISAKLYSVVCDSCTTSRDMDFCRDEDLLPNSEGSWTWKCAF--CNSEFE 2134

Query: 1903 REVMENALLQIVRQRERLYHLQDLVC 1928
               +E  ++  V      +  QDL C
Sbjct: 2135 HLGIEERIIAEVMSILAEWVAQDLKC 2160


>gi|440638351|gb|ELR08270.1| DNA polymerase epsilon subunit 1 [Geomyces destructans 20631-21]
          Length = 2224

 Score = 1345 bits (3481), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 694/1422 (48%), Positives = 950/1422 (66%), Gaps = 75/1422 (5%)

Query: 18   KLIRSAEEELEAKLGYDLFSEGDKRLGWLLTFASSSLEDEDTRKVYSCIDLYFVSQDGST 77
            KL  + +E +E    +  +  G K+ GWL+   ++ +EDE+     S +DLYF+  DG T
Sbjct: 46   KLANAVDEAME----FARYESGRKKTGWLVNLQATEIEDENNPGGRSALDLYFLEDDGGT 101

Query: 78   FKSKYKFRPYFYAATKEKMEMDVEAYLRRRYESQ-IADIEILEKEDLDLKNHLSGLHKSY 136
            FK+  +F PYF  A K   E + E +L+R      +  +  +EKEDL + NHL G  +++
Sbjct: 102  FKAAVEFEPYFLVAVKRGYEPEAEEWLKRVAGGGCVKSVRRVEKEDLQMPNHLLGYRRTF 161

Query: 137  LKISFDTVQQLMDVKKDLLHVVERNQAKFDAAEAYESILTGK----------REQRPQ-- 184
            L++ F   + L+  ++D++ + E+N+ + +A + Y  + +            R    Q  
Sbjct: 162  LELRFVNQEDLLRARRDVIPIAEKNKKQMNAMDTYAEVASANAGFDLFDDDSRGNDKQLN 221

Query: 185  ----DFLDCIVDLREYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLLEKRVDLLQRAEVH 240
                D  D IVD+REYDVPYH+R  ID D+R G+WY+V        +    + LQRA+  
Sbjct: 222  TTIVDTSDFIVDIREYDVPYHVRVLIDLDIRVGKWYEVEAKHGHTSIRCITERLQRADPV 281

Query: 241  VCAFDIETTKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEG 300
            + A+DIETTKLPLKFPDA  D IMMISYM+DGQG+LI NRE V EDI+D EYTPKPE++G
Sbjct: 282  IMAYDIETTKLPLKFPDASIDQIMMISYMIDGQGFLITNREIVSEDIDDFEYTPKPEYQG 341

Query: 301  YFKVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQ 360
             F + N  +E  L+  +F H++E +P +  TYNGD+FDWPF++ RA+ +G  M +E+G++
Sbjct: 342  PFMIFNEPDEKSLIERFFLHIKEARPTVIATYNGDFFDWPFVDARASVNGIDMYQEIGWK 401

Query: 361  CD-KNQGECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFA 419
             D ++Q +C   ++ H+DCF WV RDSYLPQGS+GLKAVT AKLGYDP E++PE M+++A
Sbjct: 402  KDSEDQYQC--NYSVHMDCFHWVNRDSYLPQGSRGLKAVTVAKLGYDPDELDPELMLQYA 459

Query: 420  KEKPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQ 479
             E+PQ ++ YSVSDAVATYYLYM YVHPFIFSL TIIP+ PD VLRKG+GTLCEMLLMV+
Sbjct: 460  SERPQTLSEYSVSDAVATYYLYMKYVHPFIFSLCTIIPLGPDAVLRKGTGTLCEMLLMVE 519

Query: 480  AYKANVICPNKHQSDPEKFYRNHLLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQ 539
            AY+ +++ PNKH S  E F+  HLLESETY+GGHVE +E+GVFR+D+P +F +D +A ++
Sbjct: 520  AYQKDIVLPNKHVSPKESFWDGHLLESETYVGGHVESIEAGVFRADIPVNFAVDTTAIDE 579

Query: 540  LLNNLDRDLQYAIKVEGKMDLESVSNYDEVKNAIMEKLLRLQEEPIREECPLIYHLDVAA 599
            LL +LD  L+++I VE K +L+ ++NYDE+K  I ++L+ L+    R E PLIYHLDVAA
Sbjct: 580  LLADLDAALKFSITVEEKKNLDDITNYDEIKQQITDRLISLKATANRSERPLIYHLDVAA 639

Query: 600  MYPNIILTNRLQPPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYYHLKKQ 659
            MYPNI+ TNRLQP S++++  C ACDFNRPGKTC R++ W WRGE    KR++Y  ++  
Sbjct: 640  MYPNIMTTNRLQPDSMISESDCAACDFNRPGKTCDRRMPWAWRGEYLPAKRNEYNMIRHS 699

Query: 660  IESEFVDGT-NGHLSKSFLDLPKMEQQSRLKDRLKKYCQKAYKRVLDKPVTELREAGICM 718
            +E+E   G      +++F +LP  EQ + ++ RL+ Y QK Y ++ D    E REA IC 
Sbjct: 700  LENEKFPGKWPNSPARTFEELPADEQSALIRKRLQIYSQKIYHKIHDSTTIE-REAIICQ 758

Query: 719  RENSFYVDTVRSFRDRRYEYKGLNKVWKGKLSEAKASGNS-IKIQEAQDMVVLYDSLQLA 777
            REN FY++TVR FRDRRYEYKG +KVWKGK    K+SG S   I     M++L+DSLQLA
Sbjct: 759  RENPFYINTVRDFRDRRYEYKGQHKVWKGKTDALKSSGASQADIDNGNKMIILFDSLQLA 818

Query: 778  HKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCV 837
            HK ILNSFYGYVMRKG+RWYSMEMAGV   TGA IIQ AR L+E+IG+PLELDTDGIWC+
Sbjct: 819  HKVILNSFYGYVMRKGSRWYSMEMAGVTCLTGAHIIQMARQLVERIGRPLELDTDGIWCM 878

Query: 838  LPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECS 897
            LP +FPEN+ F  K+  KK TISYPCVMLN  V    TN QYQTL DP +  YETHS+ +
Sbjct: 879  LPATFPENYGFNMKN-GKKFTISYPCVMLNHLVHDKFTNHQYQTLKDPATFRYETHSDNT 937

Query: 898  IEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAE 957
            I FEVDGPYKAM+LP SKEE   +KKRYAVFNDDG+LAELKGFE+KRRGELKLIK+FQ +
Sbjct: 938  IFFEVDGPYKAMVLPTSKEEDKNLKKRYAVFNDDGSLAELKGFEVKRRGELKLIKIFQQQ 997

Query: 958  LFDKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLADYGE 1017
            +F  FL G+T+ E Y+AVA VANRWLD+L ++G+ +AD ELID I E+ +MSK+LA+YG 
Sbjct: 998  IFKFFLEGTTLVETYAAVAKVANRWLDVLHSKGETLADEELIDLICENRSMSKTLAEYGT 1057

Query: 1018 QKSCAVTTARRLSDFLGDTMVKDKGLRCQYIVACEPQGTPVSERAVPVAIFETDAEIMKF 1077
            QKS ++TTA+RL+DFLG+ M+KDKGL C+YI+   P+  PV+ERA+PVAIF  +A + ++
Sbjct: 1058 QKSTSITTAKRLADFLGEQMIKDKGLNCKYIICARPKSAPVTERAIPVAIFSAEASVKRY 1117

Query: 1078 YLRKWCKTS-SDVGIRSIVDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLYK 1136
            YLRKW K    ++  R+++DW+YY  RL S IQK+ITIPAA+QKV NPVPRV HP+WL +
Sbjct: 1118 YLRKWLKEDPENMDPRALLDWNYYLDRLGSVIQKLITIPAALQKVRNPVPRVAHPEWLQR 1177

Query: 1137 KVREKEDKFRQRKLVDIFSSLKKDDFLNKTCNAETNLMDENVEDLEDFPKKRRNSVNGPR 1196
            ++  K+DK +Q+K+ D+FS    +D         TNL D+ + DLEDF  +    +  P+
Sbjct: 1178 RINTKDDKMKQKKMTDLFSKKPLEDI--------TNLKDQTLGDLEDFGTQ----ILKPK 1225

Query: 1197 PIVRCFEVNNEQKTVKTTDQVDSLRQQLEPSEVSDQQPSSQNAIDTENIDRIVDYKGWLE 1256
             I     ++++ K  K        R+  EP+      P +  A+     D   DY G+L+
Sbjct: 1226 TITSLV-MSSQPKPQK--------RKSPEPAVPVSVDPFA--ALPKTMPDPTQDYIGFLK 1274

Query: 1257 LKKRKWKDNLDRRKKQKLGSLRASHQANGVSESLGDMINHKEAQRRTGVGSYFRRQETAM 1316
             +K+KWK     R       +R  H           +     A   + +G+ FR Q   +
Sbjct: 1275 YQKQKWKIQKQSR-------IRRRH-----------LFGETRAATSSDIGATFRVQAELV 1316

Query: 1317 TRCHWQIIQLVPSSQSGVFLAWVVVEGIMVRIPITVPRLFYLNSK-----DPIVEKFPGR 1371
             R  WQ++QL  +   G  LA V+++  +  I + VPR  +LN K     D  +E    +
Sbjct: 1317 YRSTWQVLQLSGTESPGTVLAHVLIDNKVHTIKVKVPRSLFLNMKGKDLPDVDIEGCSAQ 1376

Query: 1372 RVNKTLPHGRRSFNLIEVMIDEDQFRKESKKLAALLADPEVE 1413
            +V+ TLP+G  S +L ++ + ED +   ++KLA L   P VE
Sbjct: 1377 KVSHTLPNGHPSVHLFKLTMSEDVYVNGARKLALLFNHPSVE 1418



 Score =  236 bits (601), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 162/618 (26%), Positives = 290/618 (46%), Gaps = 64/618 (10%)

Query: 1415 LGWQQNAAKIGMQRCAASSQWFNERISLARYAHI-------------------------- 1448
            LGWQ   AK  +        W +E  +LARY  +                          
Sbjct: 1621 LGWQAFIAKRIINNYLNLGSWISELTNLARYGDVPLCNLERDDPRFLIDIAYARRLEKNN 1680

Query: 1449 --LWISDDGVPDLGGTSEEDECFADE-VHQPVLTYPGAYRKVSVELKIHHLSVNALLKSN 1505
              LW S    PD  G  ++D     E V  P +  PG Y  V +E+ + +L++N +L S+
Sbjct: 1681 VVLWWSSGPRPDHAGYEKDDVLGPLETVQMPTVNNPGTYSSVCIEIDVRNLAINTILTSS 1740

Query: 1506 QVNEMEGGG---LFGFDQDMNSGPYNNELCGFDETTSSAPAFRVVKQLIQRCLTDAVTSG 1562
             +N++EG      F      +  P +     + +   +     V++++++   T+A   G
Sbjct: 1741 LINDLEGSMDSVTFNPAAPQDDAPTDGANALYSDNAFAGAGVAVLREMVKAWWTEAC-KG 1799

Query: 1563 NVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEFRKLGATIIFANFSK 1622
            +  AD ++ HL RW+ SP+S ++D  LH  +  + +K F  L+A+FR++G+ ++FA+ ++
Sbjct: 1800 SPMADMMVLHLLRWVESPNSFMYDRSLHYYVQMMSRKAFQQLMADFRRVGSHVVFADANR 1859

Query: 1623 VIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLFMDQYNYGGIPARAD 1682
            +++ T K ++  A AY   +LK+++++ LF ++ELE   +W  L++ D++NYGG     +
Sbjct: 1860 LLLQTTKAEVGNAYAYSQYILKSIKSKPLFHFLELEIKEYWDYLVWYDEFNYGG--KGCE 1917

Query: 1683 ESLDDDSQ-VDIVSSWNIAEYLPKEIQDHFVLVVSEFMYIPWKHAQKLAASRASLQEGSS 1741
            E ++ ++Q ++ +  W +A++LP+ +Q  F   V +F  I   H  K    R    E  +
Sbjct: 1918 EVVEAENQTLECIMHWQLAKFLPEPMQPIFNDWVIQF--IELMHGLK----RPQF-EDPN 1970

Query: 1742 CTPSITVAAAENF-ESHIVQYVKGE-ISSYFTGKLLSIVR----DAIHHMKKMNNDQHNS 1795
             TP  T+       E    + V G+        ++  ++R    + +H    M+    + 
Sbjct: 1971 ATPRPTLLPVRALGEDKADKAVLGKTFERPLKRQIAQLIRRQKDEMLHPELVMDYRFPSL 2030

Query: 1796 PGVMQTAANIHKVDAPLEFIKHVCAAFALDQNVQHDVLVMRKNLLKYVRVREFAPEAEFR 1855
            PG   T  N       L+ +K +    +LD+N+  +  ++RK LL    VREF+ EA F 
Sbjct: 2031 PGSHLTFTN-----PALQLVKSLMQVLSLDKNIMLEARLLRKELLMLFEVREFSSEATFV 2085

Query: 1856 DPCPSFILPNVICSYCNDCRDLDLCRDMALLAQD--------WHCAMPQCGQPYDREVME 1907
            +P  S     VIC  C   RDLD CRD  L+  +        W C    CG  Y+R V+E
Sbjct: 2086 NPSSSLRFQQVICDTCTMARDLDFCRDADLVPDEGAAGEFRPWKCGY--CGTEYERIVLE 2143

Query: 1908 NALLQIVRQRERLYHLQDLVCIRCNQVKAAHLAEQCACAGSFRCKEDASDFRSKMQIFLN 1967
              ++  V      +  QDL C++C+ V+     E C+C+G +  +   +D   K+ I+  
Sbjct: 2144 QRMIADVEALVTQWATQDLKCVKCSGVRINDFMEHCSCSGEWVGEMKRADVEKKLAIYEK 2203

Query: 1968 IANRQGFQLLQECTSWIL 1985
            +      ++L+     +L
Sbjct: 2204 VGKFYELKMLKTVLEGVL 2221


>gi|390595262|gb|EIN04668.1| DUF1744-domain-containing protein [Punctularia strigosozonata
            HHB-11173 SS5]
          Length = 2224

 Score = 1343 bits (3477), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 685/1429 (47%), Positives = 925/1429 (64%), Gaps = 108/1429 (7%)

Query: 23   AEEELEAKLGYDLFSEGDKRLGWLLTFASSSLEDEDTRKVYSCIDLYFVSQDGSTFKSKY 82
            A +E++ KLG+    EG +R GWL+    + ++D D     + +D YF+  DG  FK+  
Sbjct: 53   ANDEVDEKLGFARVQEGGRREGWLVNMHPTLMKDPDYAGGKAAVDFYFIQDDGGMFKATL 112

Query: 83   KFRPYFYAATKEKMEMDVEAYLRRRYESQIADIEILEKEDLDLKNHLSGLHKSYLKISFD 142
             + PYF  A K  ME  +E +L ++YE  I  I    K+DL + NHL    + +L++ F 
Sbjct: 113  LYEPYFMIACKSGMENTIEEWLMKKYEGLIVRISRERKQDLKVPNHLVNPGRLFLQLCFR 172

Query: 143  TVQQLMDVKKDLLHVVERNQAKFDAAEAYESILT-------------------------- 176
             V  L+ V+++++ +   N AK DA +AY  ++                           
Sbjct: 173  NVSDLLTVRREIVPLALANGAKRDAVDAYAEVVNATANGTGSMHLDVDVDMDEIDGYNAP 232

Query: 177  GKREQRPQDFLDCIVDLREYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLLEKRVDLLQR 236
            G R++ P++    I+D REYDVPY++R AIDND+R G WY V++++  P      + ++R
Sbjct: 233  GARDRDPRE---GIIDAREYDVPYYLRVAIDNDLRVGLWYAVTLTAGQPSFAVLRERVKR 289

Query: 237  AEVHVCAFDIETTKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKP 296
            A+  V A+DIETTK PLKFPD   D +MMISYM+DGQGYLI NRE V EDIED EYTP+ 
Sbjct: 290  ADPVVMAYDIETTKAPLKFPDQATDQVMMISYMIDGQGYLITNREIVSEDIEDFEYTPRE 349

Query: 297  EFEGYFKVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEE 356
             +EG F V N  +E   +  WF H+QEVKP +  T+NGD+FD+PFL  RA  HG  M +E
Sbjct: 350  GYEGPFTVFNEPDEPSTIMRWFRHVQEVKPTVMATFNGDFFDFPFLCARAKVHGIDMFQE 409

Query: 357  LGFQCDKNQGECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMV 416
            +GF  D N+ E +++   H+DCF WVKRDSYLPQGSQGLKAVT AKLGY+P+E++PE M 
Sbjct: 410  IGFAID-NEEEFKSRSCVHMDCFRWVKRDSYLPQGSQGLKAVTTAKLGYNPIELDPELMT 468

Query: 417  RFAKEKPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLL 476
             +A E+PQ++A YSVSDAVATYYLYM YVHPFIFSL  IIP++PDEVLRKGSGTLCE LL
Sbjct: 469  PYALEQPQVLAQYSVSDAVATYYLYMKYVHPFIFSLCNIIPLNPDEVLRKGSGTLCETLL 528

Query: 477  MVQAYKANVICPNKHQSDPEKFYRNHLLESETYIGGHVECLESGVFRSDLPTSFKLDPSA 536
            MV+AY+ ++I PN+H+ +    Y  HLL SETY+GGHVE LE+GVFRSD+PT FK+DP+A
Sbjct: 529  MVEAYRGHIIMPNRHEEEHGNMYEGHLLASETYVGGHVEALEAGVFRSDIPTHFKIDPTA 588

Query: 537  YEQLLNNLDRDLQYAIKVEGKMDLESVSNYDEVKNAIMEKLLRLQEEPIREECPLIYHLD 596
             ++L++ LD  L++ I  E K  LE V+NYDEVK  I  KL  +++ P+R + PLIYHLD
Sbjct: 589  AQELIDQLDAALEFCITEESKASLEDVTNYDEVKGQIQAKLEEMRDNPLRMDKPLIYHLD 648

Query: 597  VAAMYPNIILTNRLQPPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYYHL 656
            VAAMYPNI+L+NRLQP SIV +  C  CD+NRPGKTC RKL W WRGE F   R ++  +
Sbjct: 649  VAAMYPNIMLSNRLQPDSIVDEATCAVCDYNRPGKTCDRKLTWAWRGEFFPAHRDEFNMI 708

Query: 657  KKQIESE-FVDGTNGHLSKSFLDLPKMEQQSRLKDRLKKYCQKAYKRVLDKPVTELREAG 715
            +  +  E F     G   + F DL + EQ + +  RL  Y +K YK+  D  V E RE+ 
Sbjct: 709  RHALNQESFPPKKPGWPQRRFTDLSEAEQTALMHKRLGDYSRKVYKKTKDTKVEE-RESI 767

Query: 716  ICMRENSFYVDTVRSFRDRRYEYKGLNKVWKGKLSEAKASGNSI-KIQEAQDMVVLYDSL 774
            IC REN FYVDTVR+FRDRRYEYK L+K WK  L +  A G  I ++ EA+ M+VLYDSL
Sbjct: 768  ICQRENPFYVDTVRTFRDRRYEYKVLHKTWKKNLDKVAAEGKGIAEVDEAKKMIVLYDSL 827

Query: 775  QLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGI 834
            QLAHKCILNSFYGYVMRKGARW+SMEMAG+   TGAKIIQ AR L+E+IG+PLELDTDGI
Sbjct: 828  QLAHKCILNSFYGYVMRKGARWHSMEMAGITCLTGAKIIQMARQLVERIGRPLELDTDGI 887

Query: 835  WCVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHS 894
            WC+LPG+FPE+F FK K   K +  SYPC MLN  V    TN QY  L DP +  Y+ HS
Sbjct: 888  WCMLPGTFPEDFKFKLKS-GKPIGFSYPCTMLNHLVHAQFTNHQYHDL-DPETGEYKVHS 945

Query: 895  ECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVF 954
            E SI FE+DGPYKAMILP+SKEE  L+KKRYAVFNDDG+LAELKGFE+KRRGEL+LIK+F
Sbjct: 946  ENSIFFELDGPYKAMILPSSKEEDKLLKKRYAVFNDDGSLAELKGFEVKRRGELQLIKIF 1005

Query: 955  QAELFDKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLAD 1014
            Q+++F+KFL G+T +ECY+AVA +A+RWLD+L ++  D++D EL++ I+E+ +MSK+LA+
Sbjct: 1006 QSQIFEKFLLGTTTQECYAAVAQIADRWLDVLYSRADDLSDEELVELIAENRSMSKTLAE 1065

Query: 1015 YGEQKSCAVTTARRLSDFLGDTMVKDKGLRCQYIVACEPQGTPVSERAVPVAIFETDAEI 1074
            Y  QKS +++TA+RL++FLGD MVKDKGL C++I++ +P G PV+ERAVPVAIF  +  +
Sbjct: 1066 YAGQKSTSISTAKRLAEFLGDQMVKDKGLACKFIISQKPMGAPVTERAVPVAIFSAEESV 1125

Query: 1075 MKFYLRKWCKTSS--DVGIRSIVDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPD 1132
             + YLRKW K +S  +  +R+I+DW YY +RL S IQK+ITIPAAMQKV NPVPR+ HPD
Sbjct: 1126 KRTYLRKWLKDNSLANFELRTILDWDYYIERLGSVIQKLITIPAAMQKVPNPVPRIRHPD 1185

Query: 1133 WLYKKVREKEDKFRQRKLVDIFSSLKKDDFLNKTCNAETNLMDENVEDLEDFPKKRRNSV 1192
            WL+++V   +DKF QRK+ D F+             + T  MD ++ED+       ++  
Sbjct: 1186 WLHRRVMAIDDKFHQRKVTDFFA--------KPPAESSTQPMDVDMEDI----GSAKDRS 1233

Query: 1193 NGPRPIVRCFEVNNEQKTVKTTDQVDSLRQQLE--PSEVSDQQPSSQNAIDTENIDRIVD 1250
            + PR  +    VN + +           +QQ E  P EV    P+             + 
Sbjct: 1234 DRPRIAI----VNRKPRK----------KQQREATPEEVRKPLPNPS-----------IS 1268

Query: 1251 YKGWLELKKRKWKDNLDRRKKQKLGSLRASHQANGVSESLGDMINHKEAQRRTGVGSYFR 1310
            Y  W++  + +WK+ L  R      S   +                          + FR
Sbjct: 1269 YSAWIKAIRPRWKEKLQARWGSSGSSSVVA-------------------------PAMFR 1303

Query: 1311 RQETAMTRCHWQIIQLVPSSQSGVFLAWVVVEGIMVRIPITVPRLFYLNSKDP------I 1364
              +    R  W ++ + P+   G F+ W+ V+  +V IP+ +PR FY++++ P      +
Sbjct: 1304 GAKVKTNR-RWDVVHIRPTKIPGRFMLWLNVDERLVPIPLRIPREFYIHTRTPPKEGTLV 1362

Query: 1365 VEKFPGRRVNKTLPHGRRSFNLIEVMIDEDQFRKESKKLAALLADPEVE 1413
             E +   +V + LP G    NL ++   ED + +  ++   L  DP V+
Sbjct: 1363 SELWTAEKVVRGLPRGAPCVNLYKITAREDVYEECQEQFIDLTNDPNVD 1411



 Score =  291 bits (745), Expect = 3e-75,   Method: Compositional matrix adjust.
 Identities = 184/622 (29%), Positives = 312/622 (50%), Gaps = 59/622 (9%)

Query: 1412 VEVLGWQQNAAKIGMQRCAASSQWFNERISLARY-----AHI------------------ 1448
            ++V  WQ + A+  + R    + W +  ++LA Y      H+                  
Sbjct: 1611 LDVFPWQSSVAQKMVIRYLTVASWIDASVALATYYDVPMGHVEGDQPLLLADIDFARRLT 1670

Query: 1449 -----LWISDDGVPDLGGTSEEDECFADEVHQPVLTYPGAYRKVSVELKIHHLSVNALLK 1503
                 LW S   +PDLGG  ++D+  ++ +       PG Y  V +E+++ +L+VNA+L 
Sbjct: 1671 KEDLVLWWSPGDLPDLGGI-QDDKRPSEPLPGTEFLSPGCYFNVCLEIEVRNLAVNAILH 1729

Query: 1504 SNQVNEMEG-GGLFGFDQDMNSGPYNNELCGFD--------ETTSSAPAFRVVKQLIQRC 1554
            S  VNE+EG GG   FD   ++    +E  G D        E+  S   F ++K +++  
Sbjct: 1730 SVIVNELEGSGGATAFDSTSHT---LDEYVGGDAQRDLTLGESNVSPKTFGILKAMVKTW 1786

Query: 1555 LTDAVTSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEFRKLGAT 1614
            L D + +    +   + H +RW+ S  S L+DP +HR +H +M+K F  LLAE+++LG+ 
Sbjct: 1787 LLDKIQNNISPSSLTIDHFWRWISSSVSHLYDPSIHRFVHGLMRKTFIQLLAEYKRLGSH 1846

Query: 1615 IIFANFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLFMDQYNY 1674
            +++A+ S++++ T K     A AY   +  A+Q+ ELF+ I L+   F+  LLFMD  N 
Sbjct: 1847 VVYADLSRILLVTSK-PPGTADAYATYINTAVQSNELFQHIWLKTERFYDFLLFMDPANL 1905

Query: 1675 GGIPARADESLDDDSQVDIVSSWNIAEYLPKEIQDHFVLVVSEFMYIPWKHAQKL-AASR 1733
            GG+     ++++   ++ I   WNI  +LP  IQ  F  +V  FM   ++  QK    +R
Sbjct: 1906 GGVVCENPKAVEPPEEIVIEMQWNIQNFLPPAIQKDFASIVRYFMIELYRSRQKSDKVAR 1965

Query: 1734 ASLQEGSSCTPSITVAAAENFESHI--VQYVKGEISSYFTGKLLSIVRDAI--HHMKKMN 1789
              L+      P+  + A +   + +  ++  +  I+   T KLL +V      H    M 
Sbjct: 1966 TPLR----ILPNGALDATQRDAAKVKEMELTREFIARRLTRKLLRMVGSIQDRHKHAMME 2021

Query: 1790 NDQHNSPGVMQTAANIHKVDAPLEFIKHVCAAFALDQNVQHDVLVMRKNLLKYVRVREFA 1849
            ++  +    +   +++   D  LEF+K VCA  AL +  Q +V ++R+++L+   VREF+
Sbjct: 2022 DNLADWDFPVLPGSHLRLYDPVLEFVKFVCAVLALAKEYQIEVGLLRRSVLELTGVREFS 2081

Query: 1850 PEAEFRDPCPSFILPNVICSYCNDCRDLDLCRDMALL------AQDWHCAMPQCGQPYDR 1903
             +A FR PC    L NV C +C+  RD D CRD  LL         W C    CG  YDR
Sbjct: 2082 NDAVFRQPCEPLKLSNVPCKHCDSLRDFDFCRDPELLPSGLRSTTKWLCG--NCGGEYDR 2139

Query: 1904 EVMENALLQIVRQRERLYHLQDLVCIRCNQVKAAHLAEQCACAGSFRCKEDASDFRSKMQ 1963
              +E AL+ ++   ER +  QDL C +C Q+++ +++  C C+GS++   + +D R K++
Sbjct: 2140 TAIEFALIDLLFGLERTFAQQDLRCTKCKQIQSDNVSRHCQCSGSYQLTINKADVRRKLR 2199

Query: 1964 IFLNIANRQGFQLLQECTSWIL 1985
              +N+A       L+EC    L
Sbjct: 2200 TMVNVAILHNLHRLKECAQTAL 2221


>gi|402087585|gb|EJT82483.1| DNA polymerase epsilon catalytic subunit A [Gaeumannomyces graminis
            var. tritici R3-111a-1]
          Length = 2241

 Score = 1343 bits (3477), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 687/1414 (48%), Positives = 927/1414 (65%), Gaps = 70/1414 (4%)

Query: 26   ELEAKLGYDLFSEGDKRLGWLLTFASSSLEDEDT--RKVYSCIDLYFVSQDGSTFKSKYK 83
            +++  +G+  +  G +R GWL+    +S+ED+        + ID YF+ +DG TFK+   
Sbjct: 57   DIDESMGFARYDAGRRREGWLVNVQPTSIEDDRVPGGGGRAAIDCYFIEEDGGTFKATVA 116

Query: 84   FRPYFYAATKEKMEMDVEAYLRRRYESQIA-DIEILEKEDLDLKNHLSGLHKSYLKISFD 142
            + PYF  A ++  E DVE + +R     +   +  +EKEDL + NHL G  +++L++ F 
Sbjct: 117  YDPYFLIAARKGRESDVEEWCKRVPGGGVVKSVRRVEKEDLKMPNHLLGYRRTFLELRFH 176

Query: 143  TVQQLMDVKKDLLHVVERNQAKFDAAEAYESI---------LTGKREQRPQ------DFL 187
             VQ L+  +KD+  + E+N+   DA + Y  +             RE   +      D  
Sbjct: 177  NVQDLLAARKDIFPIAEKNKKNMDAMDTYAEVAATNGDFDLFDDSREHDKRLNVSFADSS 236

Query: 188  DCIVDLREYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLLEKRVDLLQRAEVHVCAFDIE 247
            D IVD+REYDVPYH+R  ID D+R  +WY V        +    + L  A+  V A+DIE
Sbjct: 237  DFIVDIREYDVPYHVRVMIDMDIRVAKWYWVEAKHGVTTVVCNEEHLPMADPVVMAYDIE 296

Query: 248  TTKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNV 307
            T K PLKFPD   D IMMISYM+DGQG+LI NRE + EDI D EYTPKPE+ G F + N 
Sbjct: 297  TAKAPLKFPDPTVDQIMMISYMIDGQGFLITNREIISEDIADFEYTPKPEYPGPFMIFNE 356

Query: 308  NNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDKNQGE 367
             +E  L+  +F H++E +P +  TYNGD+FDWP+++ RA+ +G  M  E+G++ D  + +
Sbjct: 357  PDEKGLIERFFLHIKEARPTVIATYNGDFFDWPYVDARASFNGIDMYREIGWRKD-TEDQ 415

Query: 368  CRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQMMA 427
             +  ++ H+DCF WV RDSYLPQGS+GLKAVT AKLGYDP E++PE M  +A E+PQ +A
Sbjct: 416  YKCNYSVHMDCFHWVNRDSYLPQGSRGLKAVTVAKLGYDPDELDPELMTPYASERPQTLA 475

Query: 428  SYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVIC 487
             YSVSDAVATYYLYM YVHPF+FSL TI+P+ PD+  RKG+GTLCEMLLMVQAY+  ++ 
Sbjct: 476  EYSVSDAVATYYLYMKYVHPFVFSLCTILPLGPDDTERKGTGTLCEMLLMVQAYQKGIVL 535

Query: 488  PNKHQSDPEKFYRNHLLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQLLNNLDRD 547
            PNKH S  E F+  HLL+SETY+GGHVE +E+GVFR+D+P +F +D SA E+L+ +LD  
Sbjct: 536  PNKHVSAKESFWDGHLLDSETYVGGHVESIEAGVFRADIPVNFAVDASACEELIRDLDAA 595

Query: 548  LQYAIKVEGKMDLESVSNYDEVKNAIMEKLLRLQEEPIREECPLIYHLDVAAMYPNIILT 607
            L+++I VE K  ++ V+NY+EVK  I  KL  L+E P R E PLIYHLDVA+MYPNI+ T
Sbjct: 596  LKFSITVEEKKPMDDVTNYEEVKEQIKAKLEALRETPNRLERPLIYHLDVASMYPNIMTT 655

Query: 608  NRLQPPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYYHLKKQIESEFVDG 667
            NRLQP S+V++  C ACDFNRPGKTC R+L W WRGE    KR +Y  ++  +E+E   G
Sbjct: 656  NRLQPDSMVSESDCAACDFNRPGKTCDRRLPWSWRGEYLPAKRDEYNMIRHALENEKFPG 715

Query: 668  TNGHLS-KSFLDLPKMEQQSRLKDRLKKYCQKAYKRVLDKPVTELREAGICMRENSFYVD 726
               +   ++F +LP  EQ +  + RL+ Y QK Y ++ D  + E REA IC REN FY+D
Sbjct: 716  KYPNSPMRTFQELPADEQATLTRKRLQIYSQKVYHKIHDSTIIE-REAIICQRENPFYID 774

Query: 727  TVRSFRDRRYEYKGLNKVWKGKLSEAKASGNSI-KIQEAQDMVVLYDSLQLAHKCILNSF 785
            TVR FRDRRY+YKG  KVWKGK    K+SG S  ++  A+ M++L+DSLQLAHK ILNSF
Sbjct: 775  TVRDFRDRRYDYKGKAKVWKGKTDALKSSGASASEVDAARKMIILFDSLQLAHKVILNSF 834

Query: 786  YGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLPGSFPEN 845
            YGYVMRKG+RWYSMEMAGV   TGA IIQ A++L+E++G+PLELDTDGIWC+LP +FPEN
Sbjct: 835  YGYVMRKGSRWYSMEMAGVTCLTGATIIQLAKVLVERLGRPLELDTDGIWCMLPATFPEN 894

Query: 846  FTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEFEVDGP 905
            F FK K+  KKL ISYPCVMLN  V    TN QYQTLVDP +  YETHS+ SI FEVDGP
Sbjct: 895  FAFKLKN-GKKLAISYPCVMLNHLVHAKFTNHQYQTLVDPKTFKYETHSDNSIFFEVDGP 953

Query: 906  YKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFLHG 965
            YKAM+LP SKEE   +KKRYAVFNDDG+LAELKGFE+KRRGELKLIK+FQ ++F  FL G
Sbjct: 954  YKAMVLPTSKEEDKNLKKRYAVFNDDGSLAELKGFEVKRRGELKLIKIFQQQIFKFFLEG 1013

Query: 966  STIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLADYGEQKSCAVTT 1025
            +T+ ECY AVA VANRWLD+LDN+G  +AD EL+D ISE+ +MSK+L +YG QKS ++TT
Sbjct: 1014 TTLAECYEAVATVANRWLDVLDNKGTTLADEELMDLISENRSMSKTLEEYGSQKSTSITT 1073

Query: 1026 ARRLSDFLGDTMVKDKGLRCQYIVACEPQGTPVSERAVPVAIFETDAEIMKFYLRKWCKT 1085
            A+RL+DFLG  MVKDKGL C++I+   P+G PV+ERAVPVAIF  D E  + YL+KW K 
Sbjct: 1074 AKRLADFLGAQMVKDKGLNCKFIICARPKGAPVTERAVPVAIFSADEETKRAYLKKWLKE 1133

Query: 1086 S-SDVGIRSIVDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLYKKVREKEDK 1144
               +   R+++DW+YY +RL S IQK+ITIPAA+QKV NPVPRV +PDWL +++  K+DK
Sbjct: 1134 EPQNTDPRALLDWAYYAERLGSVIQKLITIPAALQKVRNPVPRVPYPDWLQRRINTKDDK 1193

Query: 1145 FRQRKLVDIFSSLKKDDFLNKTCNAETNLMDENVEDLEDFPKKRRNSVNGPRPIVRCFEV 1204
             +Q+KL D+F       F        TN   + + D+ED   K          +++   V
Sbjct: 1194 MKQKKLTDLF-------FSKGPLEDITNTGSQRLNDMEDMGSK----------LLQPKTV 1236

Query: 1205 NNEQKTVKTTDQVDSLRQQLEPSEVSDQQPSSQNAIDTENIDRIVDYKGWLELKKRKWKD 1264
            N+    +  + +    R++ EP+   D   +    +   +    VDYKG+L  +K KW  
Sbjct: 1237 NS---VIAASQRTTQKRKEPEPAVPIDPWAALPKVMPNPS----VDYKGFLAYQKIKW-- 1287

Query: 1265 NLDRRKKQKLGSLRASHQANGVSESLGDMINHKEAQRRTGVGSYFRRQETAMTRCHWQII 1324
                 K QK   +R  H         GD    +   + T +   FR Q     +  WQ++
Sbjct: 1288 -----KIQKQARIRRRHL-------FGD---RRGNAQNTSIQQTFRAQAEVTFQNTWQLL 1332

Query: 1325 QLVPSSQSGVFLAWVVVEGIMVRIPITVPRLFYLN--SKDPIVEKFPG---RRVNKTLPH 1379
            QL  +   G+  A+V+++  +  + + VPR  +LN  S+D      PG    +VN TLP+
Sbjct: 1333 QLKMTDNPGIVAAYVLIDNRVHSVKMKVPRQVFLNLKSRDLPDVDVPGCHVEQVNHTLPN 1392

Query: 1380 GRRSFNLIEVMIDEDQFRKESKKLAALLADPEVE 1413
            G  S +L ++++ ED +  E++K + L   P VE
Sbjct: 1393 GHSSVHLFKLVVPEDVYVAEAQKFSLLFNHPSVE 1426



 Score =  254 bits (648), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 164/621 (26%), Positives = 288/621 (46%), Gaps = 52/621 (8%)

Query: 1408 ADPEVEVLGWQQNAAKIGMQRCAASSQWFNERISLARYAHI------------------- 1448
            AD  +  LGWQ   A+  +    +   W     +LARY  +                   
Sbjct: 1627 ADSALPPLGWQGVVARRLINHYLSLGAWVLHLTALARYGDVPLCNLERDDPRFLIDVAYA 1686

Query: 1449 ---------LWISDDGVPDLGGTSEEDECFA-DEVHQPVLTYPGAYRKVSVELKIHHLSV 1498
                     LW S    PD  G  ++D     D V  P +  PG +  V V++++ +L++
Sbjct: 1687 RRLQANDVVLWWSPGPRPDHAGYEKDDIAGPLDVVQMPSVNNPGTFASVCVDIEVRNLAI 1746

Query: 1499 NALLKSNQVNEMEGGGLFGFDQDMNSGPYNNELCGFDETTSSAPAFRVVKQLIQRCLTDA 1558
            N +L S+ +NE+EG     F+   ++   +       E   +    +V++++++    +A
Sbjct: 1747 NTILTSSLINELEGADSVSFNPASDTAGVDGSEMLHSENAFANAGVQVLREMVKSWWAEA 1806

Query: 1559 VTSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEFRKLGATIIFA 1618
               G+  AD ++QHL RW+ SP S L+D  LH  +  + +K    L+++FR++G+ ++FA
Sbjct: 1807 C-RGSTMADVMVQHLVRWVESPDSFLYDRALHYYVQMMSRKALQQLMSDFRRVGSQVVFA 1865

Query: 1619 NFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLFMDQYNYGGIP 1678
            + +++++ T K ++  A AY   +LK+++++ LF +I+LE   +W  L++ DQ+NYGG  
Sbjct: 1866 SSNRLLLQTTKGEVGNAYAYSQYILKSIKSKPLFHFIDLEIREYWDYLVWYDQFNYGG-- 1923

Query: 1679 ARADESLDDDSQ-VDIVSSWNIAEYLPKEIQDHFVLVVSEFMYIPWKHAQKLAASRASLQ 1737
                E ++ ++Q +D +  W +A +LP  +Q  F   V EF+ +   H+ K  A   S  
Sbjct: 1924 KACQEVVEAETQDLDTIMHWQMATFLPLRLQPVFQEWVIEFIQL--MHSHKRPALDGSTP 1981

Query: 1738 EGSSCTPSITVAAAENFESHIV--QYVKGEISSYFTGKLLSIVRDAIHHMKKMNNDQHNS 1795
              +           E+ E  ++  +  +  +     G L +  R+ +H     + D    
Sbjct: 1982 RLTQLPIRNNDGLGEDGEGQMLLGKTFERPLKKEIAGLLAAQKRELLHPELASDYDFPQL 2041

Query: 1796 PGVMQTAANIHKVDAPLEFIKHVCAAFALDQNVQHDVLVMRKNLLKYVRVREFAPEAEFR 1855
            PG   T  N+    A LE +K +    +LD+N+  +  ++RK LL  + VREF+ EA F+
Sbjct: 2042 PGSHLT--NLQPTSAVLELVKCLMQVLSLDKNISLEARLLRKELLAMLDVREFSREAAFQ 2099

Query: 1856 DPCPSFILPNVICSYCNDCRDLDLCRDMALLA-----------QDWHCAMPQCGQPYDRE 1904
            +P  S  L  V C  C   RDLDLCRD  LL            + W C    C   YDR 
Sbjct: 2100 NPSESLRLAQVSCDSCTVARDLDLCRDEDLLPVPGESSTGGDNRPWRCTF--CQAEYDRN 2157

Query: 1905 VMENALLQIVRQRERLYHLQDLVCIRCNQVKAAHLAEQCACAGSFRCKEDASDFRSKMQI 1964
             +E  L+  V      +  QDL C++C   +     E C C+G +       D   ++++
Sbjct: 2158 ALEEVLVAQVEGAVTEWATQDLRCVKCGASRVNEFMEHCTCSGDWGPSTKREDLVRRLKV 2217

Query: 1965 FLNIANRQGFQLLQECTSWIL 1985
              N+A   G ++L +    + 
Sbjct: 2218 HRNVAKFYGLKMLGDVVEGVF 2238


>gi|154301328|ref|XP_001551077.1| hypothetical protein BC1G_10334 [Botryotinia fuckeliana B05.10]
          Length = 2229

 Score = 1343 bits (3476), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 692/1434 (48%), Positives = 950/1434 (66%), Gaps = 95/1434 (6%)

Query: 22   SAEEELEA-KLGYDL--------FSEGDKRLGWLLTFASSSLEDEDTRKVYSCIDLYFVS 72
            S EE++EA KLG+ +           G K++GWL+   ++++EDE   +  + +D YF+ 
Sbjct: 38   SLEEKVEAVKLGHSIDEAMGFPRHESGKKKVGWLVNIKATTIEDEKHLEGRAGVDCYFIE 97

Query: 73   QDGSTFKSKYKFRPYFYAATKEKMEMDVEAYLRRRYESQI-ADIEILEKEDLDLKNHLSG 131
             DG TFK+  ++ PYF  A K   E + E +L+R     +   I+ +EKEDL + NHL G
Sbjct: 98   DDGGTFKATVEYEPYFLVAVKRGYEPEAEEWLKRAPGGGVLKSIKRVEKEDLSMPNHLLG 157

Query: 132  LHKSYLKISFDTVQQLMDVKKDLLHVVERNQAKFDAAEAYESILTG-------------- 177
              +S+ +  F  V  L+  +KD++ V E+N+   +A + Y  + +               
Sbjct: 158  YRRSFFECRFRNVSDLLAARKDIMPVAEKNKKNMNAMDTYAEVASANAGFDLFDDSRDDD 217

Query: 178  -KREQRPQDFLDCIVDLREYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLLEKRVDLLQR 236
             +      +  D IVD+RE+DVPYH+R  ID D+R G+WY V        L+   D L R
Sbjct: 218  KRLNVSIAEGSDFIVDIREWDVPYHVRVMIDQDIRTGKWYSVEAKHGTTTLKCLEDRLAR 277

Query: 237  AEVHVCAFDIETTKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKP 296
            A+  V A+DIETTKLPLKFPDA  D IMMISYM+DGQG+LI NRE V EDIED EYTPKP
Sbjct: 278  ADPVVMAYDIETTKLPLKFPDATIDQIMMISYMIDGQGFLITNREIVSEDIEDFEYTPKP 337

Query: 297  EFEGYFKVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEE 356
            E++G F + N  +E  ++  +F H++E +P +  TYNGD+FDWPF++ RA+ +G  M  E
Sbjct: 338  EYDGPFMIFNEPDEKAVIERFFLHIKEARPTVIATYNGDFFDWPFVDARASVNGIDMYRE 397

Query: 357  LGFQCDKNQGECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMV 416
            +G++  +++ +    ++ H+DCF WV RDSYLPQGS+GLKAVT AKLGYDP E++PE M+
Sbjct: 398  IGWRRSQSEDQYICDYSAHMDCFHWVNRDSYLPQGSRGLKAVTTAKLGYDPDEIDPELML 457

Query: 417  RFAKEKPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLL 476
            R+A EKPQ +A YSVSDAVATYYLYM YVHPFIFSL TIIP+ PD VLRKG+GTLCEMLL
Sbjct: 458  RYASEKPQTLAEYSVSDAVATYYLYMKYVHPFIFSLCTIIPLGPDAVLRKGTGTLCEMLL 517

Query: 477  MVQAYKANVICPNKHQSDPEKFYRNHLLESETYIGGHVECLESGVFRSDLPTSFKLDPSA 536
            MVQAY+  ++ PNKH +  E F+  HLLESETY+GGHVE +E+GVFR+D+P +F +D +A
Sbjct: 518  MVQAYQKEIVLPNKHVTPKESFWEGHLLESETYVGGHVESIEAGVFRADIPVNFAVDTTA 577

Query: 537  YEQLLNNLDRDLQYAIKVEGKMDLESVSNYDEVKNAIMEKLLRLQEEPIREECPLIYHLD 596
             ++LL +LD  L+++I VE K  L+ + NY+EVK  I ++L  L++   R E PLIYHLD
Sbjct: 578  IDELLEDLDSALKFSITVEEKKSLDDIENYEEVKQQIADRLNSLKKTANRSENPLIYHLD 637

Query: 597  VAAMYPNIILTNRLQPPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYYHL 656
            VA+MYPNI+ TNRLQP S++ +  C ACDFNRPGKTC R++ W WRGE    KR +Y  +
Sbjct: 638  VASMYPNIMTTNRLQPDSMIQESDCAACDFNRPGKTCDRRMPWAWRGEYLPAKRDEYNMI 697

Query: 657  KKQIESEFVDGT-NGHLSKSFLDLPKMEQQSRLKDRLKKYCQKAYKRVLDKPVTELREAG 715
            +  +E+E   G       +SF DL   EQ + ++ RL+ Y QK Y ++ D+   E REA 
Sbjct: 698  RHSLENERFPGKYPKQPMRSFQDLSYEEQAALIRKRLQTYSQKIYHKIHDQTTIE-REAI 756

Query: 716  ICMRENSFYVDTVRSFRDRRYEYKGLNKVWKGKLSEAKASGN-SIKIQEAQDMVVLYDSL 774
            IC REN FY+DTV+ FRDRRY+YKG  KVWKGK    K++G  + ++++A+ M+VL+DSL
Sbjct: 757  ICQRENPFYIDTVKDFRDRRYDYKGKQKVWKGKTDALKSAGAPAAEVEDAKKMIVLFDSL 816

Query: 775  QLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGI 834
            QLAHK ILNSFYGYVMRKG+RWYSMEMAGV   TGA IIQ AR L+E+IG+PLELDTDGI
Sbjct: 817  QLAHKVILNSFYGYVMRKGSRWYSMEMAGVTCLTGAHIIQMARQLVERIGRPLELDTDGI 876

Query: 835  WCVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHS 894
            WC+LP +FPEN+ FK K+  KKL ISYPCVMLN  V    TN QYQTL DP +  YETHS
Sbjct: 877  WCMLPATFPENYAFKMKN-GKKLAISYPCVMLNHLVHDKFTNHQYQTLTDPKTFKYETHS 935

Query: 895  ECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVF 954
            + SI FEVDGPY+AMILP SKEE   +KKRYAVFNDDG+LAELKGFE+KRRGELKLIK+F
Sbjct: 936  DNSIFFEVDGPYRAMILPTSKEEDKNLKKRYAVFNDDGSLAELKGFEVKRRGELKLIKIF 995

Query: 955  QAELFDKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLAD 1014
            Q ++F  FL G+T+EE Y AVA VAN+WLD+LD++G+ +AD+ELID I E+ +MSKSL +
Sbjct: 996  QQQIFKFFLEGTTLEETYQAVAKVANQWLDVLDSKGRTLADAELIDLICENRSMSKSLEE 1055

Query: 1015 YGEQKSCAVTTARRLSDFLGDTMVKDKGLRCQYIVACEPQGTPVSERAVPVAIFETDAEI 1074
            YG QKS ++TTA+RL++FLG+ MVKDKGL C+YI+  +P+  PV+ERAVPVAIF +D  +
Sbjct: 1056 YGTQKSTSITTAKRLAEFLGEQMVKDKGLNCKYIICAKPKHAPVTERAVPVAIFSSDISV 1115

Query: 1075 MKFYLRKWCKTS-SDVGIRSIVDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDW 1133
             + +LRKW K   +D+  R+++DW YY +RL S IQK+ITIPAA+QK SNPVPRV HPDW
Sbjct: 1116 KRHFLRKWLKEDPTDMDPRALLDWDYYSERLGSVIQKLITIPAALQKCSNPVPRVAHPDW 1175

Query: 1134 LYKKVREKEDKFRQRKLVDIFSSLKKDDFLNKTCNAETNLMDENVEDLEDF------PKK 1187
            L +++R K+DK +Q+K+ D+F+    +D         +NL D  + D+EDF      PK 
Sbjct: 1176 LQRRIRIKDDKMKQKKMTDMFTKTPLEDI--------SNLQDPRMADMEDFGTQLLKPKT 1227

Query: 1188 RRNSVNGPRPIVRCFEVNNEQKTVKTTDQVDSLRQQLEP-SEVSDQQPSSQNAIDTENID 1246
              + +N              QK +K      ++   + P + + D+ PS+          
Sbjct: 1228 LGSQLNAA-----------SQKPMKRKSPEPAVAVSINPFAALPDKMPSASE-------- 1268

Query: 1247 RIVDYKGWLELKKRKWKDNLDRRKKQK--LGSLRASHQANGVSESLGDMINHKEAQRRTG 1304
               DY+G+LE +K+KWK     R +++   G  R +                     ++ 
Sbjct: 1269 ---DYEGFLEYQKQKWKIQKQARIRRRHLFGENRGA---------------------QSN 1304

Query: 1305 VGSYFRRQETAMTRCHWQIIQLVPSSQSGVFLAWVVVEGIMVRIPITVPRLFYLNSK--- 1361
            + + F+ Q   + +  WQ++QL  +   G+ LA+V+++  +  + + VPR  +LN K   
Sbjct: 1305 IATTFQNQAEQLFKSTWQVLQLRGTESPGIVLAFVLIDSKVHTLKVKVPRTVFLNLKGKE 1364

Query: 1362 --DPIVEKFPGRRVNKTLPHGRRSFNLIEVMIDEDQFRKESKKLAALLADPEVE 1413
              D  ++     +V  TLP+G  S +L ++ + ED +  E++K++ L   P VE
Sbjct: 1365 LPDIEIDGCEAEKVTHTLPNGHPSVHLFKLTMSEDVYVNEAQKISLLFNHPSVE 1418



 Score =  207 bits (528), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 140/511 (27%), Positives = 248/511 (48%), Gaps = 29/511 (5%)

Query: 1442 LARYAHILWISDDGVPDLGGTSEEDECFA-DEVHQPVLTYPGAYRKVSVELKIHHLSVNA 1500
            L R   +LW S    PD  G   +D     D V  P +  PG Y  V +EL + +L++N 
Sbjct: 1677 LQRSNVVLWWSGGPKPDHAGYELDDVLGGLDTVQMPSVNNPGTYPSVCIELDVRNLAINT 1736

Query: 1501 LLKSNQVNEMEGGGLFGFDQDMNS--GPYNNELCGFDETTSSAPAFRVVKQLIQRCLTDA 1558
            +L S+ +NE+EG     F+    S   P +     + E   +     V++++++   T+A
Sbjct: 1737 ILTSSLINELEGSDSISFNPAAPSDDAPSDGTNVLYAENAFATAGVTVLREMVKAWWTEA 1796

Query: 1559 VTSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEFRKLGATIIFA 1618
               G+  AD ++QHL RW+ +P S L+D  LH  +  + +K F  L+ +FR++G+ ++FA
Sbjct: 1797 C-RGSSMADIMVQHLVRWVENPDSFLYDRSLHYYVQMMSRKAFQQLMTDFRRVGSHVVFA 1855

Query: 1619 NFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLFMDQYNYGGIP 1678
            N +++++ T K ++  A AY   +LK+++ + LF +++LE   +W  L++ D++NYGG  
Sbjct: 1856 NSNRLLLQTTKAEVGNAYAYSQYILKSIKAKPLFHFLDLEIKEYWDYLVWYDEFNYGG-- 1913

Query: 1679 ARADESLDDDSQ-VDIVSSWNIAEYLPKEIQDHFVLVVSEFMYIPWKHAQKLAASRASLQ 1737
                E ++ ++Q +D +  W ++ +LP ++Q  F   V EF+ I       L   R    
Sbjct: 1914 KGCSEVVEAENQALDNIMHWQLSNFLPDKLQQIFNDWVLEFIDI----MHGLKKPRL--- 1966

Query: 1738 EGSSCTPSITVAAAENF----ESHIVQYVKGEISSYFTGKLLSIVRDAIHHMKKMNNDQH 1793
             G   TP  T     N     E  I+  +          ++  I+R     M      + 
Sbjct: 1967 -GIDSTPRATQIPVRNLGDDKEDKII--LGKSFEKPLKKQIAGIIRRQKDEMLHPELAED 2023

Query: 1794 NSPGVMQTAANIHKVDAPLEFIKHVCAAFALDQNVQHDVLVMRKNLLKYVRVREFAPEAE 1853
                V+   +++   +  LE +K +    +LD+N+  +  ++RK LL+   +REF+  A+
Sbjct: 2024 YKFPVL-PGSHLKSTNPALELVKSLMQVLSLDKNITLEARLLRKELLEMFEIREFSNAAK 2082

Query: 1854 FRDPCPSFILPNVICSYCNDCRDLDLCRDMALLAQ-----DWHCAMPQCGQPYDREVMEN 1908
            F++P  S  L +V+C  C   RD+D CRD  LL        W C    C   ++   +E 
Sbjct: 2083 FQNPSTSAKLFSVVCDSCTTSRDMDFCRDEDLLPNSEGSWSWKCLF--CNGEFEHLGIEE 2140

Query: 1909 ALLQIVRQRERLYHLQDLVCIRCNQVKAAHL 1939
             ++  V      +  QDL C++C  +K   L
Sbjct: 2141 RIIGEVMGCVGEWVGQDLKCVKCKGLKVNDL 2171


>gi|388579676|gb|EIM19997.1| putative DNA polymerase epsilon catalytic subunit A [Wallemia sebi
            CBS 633.66]
          Length = 2211

 Score = 1343 bits (3475), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 694/1403 (49%), Positives = 922/1403 (65%), Gaps = 80/1403 (5%)

Query: 10   DGRRTKKQKLIRSAE-EELEAKLGYDLFSEGDKRLGWLLTFASSSLEDEDTRKVYSCIDL 68
            D R+   QK  +  E + L+A LG+  + +G  + GWL+    + +ED D     + +D 
Sbjct: 24   DERQILAQKFEKLKECDNLDATLGFSRYEQGPAKEGWLVNMHPTLIEDPDYIGGKAGVDF 83

Query: 69   YFVSQDGSTFKSKYKFRPYFYAATKEKMEMDVEAYLRRRYESQIADIEILEKEDLDLKNH 128
            YF+  DG  FKS   + PYFY   K   E  VE +L RRYE  I  IE   K+DL   NH
Sbjct: 84   YFIQDDGGMFKSTLTYEPYFYLCCKPGTEAAVEEWLLRRYEGTIYRIERAHKDDLKSPNH 143

Query: 129  LSGLHKSYLKISFDTVQQLMDVKKDLLHVVERNQAKFDAAEAYESIL-------TGKREQ 181
            L  L K+YL++ F  VQ L+ +++++L + ++N  +  A +AY  ++       T + EQ
Sbjct: 144  LLSLPKAYLQLKFRNVQDLLTIRREVLPLAQQNAERRSAVDAYADVVATAEQDVTIEEEQ 203

Query: 182  RP---QDFLDCIVDLREYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLLEKRVDLLQRAE 238
                 +D    I+D REYDVPY++R A D  +R G WY V+ +     ++K  D ++RAE
Sbjct: 204  NARSKEDPSQLIIDAREYDVPYYLRVATDLGIRVGLWYTVTGNEGKVKMDKIPDRVKRAE 263

Query: 239  VHVCAFDIETTKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEF 298
              V A+DIET K PLKFPD+  D IMMISYM+DGQGYLI NRE V EDIED +YTPK E+
Sbjct: 264  PVVMAYDIETCKAPLKFPDSAVDPIMMISYMIDGQGYLITNREIVSEDIEDFDYTPKEEY 323

Query: 299  EGYFKVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELG 358
            EG F + N  +E  +L+ +F H++E KP +  TYNGD+FD+P+++ RA  +G  +  E G
Sbjct: 324  EGPFTIFNEPDEAGVLKRFFEHIREAKPTVMATYNGDFFDFPYVDARATANGLSLYAETG 383

Query: 359  FQCDKNQGECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRF 418
            FQ D N+ E ++    H+DCF WVKRDSYLPQGS GLKAVT AKLGY+P+E++PE M  +
Sbjct: 384  FQRD-NEDEYKSATCSHMDCFRWVKRDSYLPQGSHGLKAVTVAKLGYNPIELDPELMTPY 442

Query: 419  AKEKPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMV 478
            A E+PQ++A YSVSDAVATYYLYM Y+HPF+FSL  IIP++PD+VLRKGSGTLCE LLMV
Sbjct: 443  AIEQPQVLAQYSVSDAVATYYLYMKYIHPFVFSLCNIIPLNPDDVLRKGSGTLCETLLMV 502

Query: 479  QAYKANVICPNKHQSDPEKFYRNHLLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYE 538
            +AY A VI PN+H       Y  HLL SETY+GGHVE LE+GVFR+D+PT FK+ P A +
Sbjct: 503  EAYSAGVIMPNRHVDPHGSMYEGHLLSSETYVGGHVEALEAGVFRNDIPTDFKIVPKAIQ 562

Query: 539  QLLNNLDRDLQYAIKVEGKMDLESVSNYDEVKNAIMEKLLRLQEEPIREECPLIYHLDVA 598
            QL+++LD  L+++I VE K  LE + NYDEVKN I   L  L++ P R++ PLIYHLDVA
Sbjct: 563  QLIDDLDNALKFSIVVEEKKKLEDIENYDEVKNEIKGVLENLRDNPNRQDPPLIYHLDVA 622

Query: 599  AMYPNIILTNRLQPPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYYHLKK 658
            AMYPNI+L+NRLQP ++V + +C ACD+N PGK C R+L W WRGE F  KR +Y  ++ 
Sbjct: 623  AMYPNIMLSNRLQPDAVVDEGMCAACDYNTPGKQCDRRLTWAWRGEFFPAKRDEYNMIRH 682

Query: 659  QIESEFVDGT-NGHLSKSFLDLPKMEQQSRLKDRLKKYCQKAYKRVLDKPVTELREAGIC 717
             +ESE   G   G   + F++L   EQ + +  RL  Y +K Y++  D  +   REA IC
Sbjct: 683  ALESESFPGKYPGASKRRFIELSTTEQSALMHKRLGDYSRKVYRKTHDTKIIN-REAIIC 741

Query: 718  MRENSFYVDTVRSFRDRRYEYKGLNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLA 777
             REN FY+DTVR+FRDRRYEYKG +K WKGKL  A  SG+     EA+ M++LYDSLQLA
Sbjct: 742  QRENPFYIDTVRAFRDRRYEYKGFHKQWKGKLDSANESGSLSASVEAKKMIILYDSLQLA 801

Query: 778  HKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCV 837
            HKCILNSFYGYVMRKGARWYSMEMAG+   TGA IIQ AR L+E+IG+PLELDTDGIWC+
Sbjct: 802  HKCILNSFYGYVMRKGARWYSMEMAGITCLTGATIIQMARQLVEQIGRPLELDTDGIWCM 861

Query: 838  LPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECS 897
            LPG FPENF FK K+  K +  SYPCVMLN  V    TNDQY TL +     YE HSE S
Sbjct: 862  LPGCFPENFKFKLKN-GKTMGFSYPCVMLNHLVHDKFTNDQYHTLTNKEKGEYEVHSENS 920

Query: 898  IEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAE 957
            I FE+DGPY+AMILPASKEE  L+KKRYAVF +DG+LAELKGFE+KRRGEL+LIK FQ+E
Sbjct: 921  IFFELDGPYRAMILPASKEEDKLLKKRYAVFEEDGSLAELKGFEVKRRGELQLIKFFQSE 980

Query: 958  LFDKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLADYGE 1017
            +F KFL G T +ECY AVA VA++WLD+L  +G  ++D EL++ ISE+ +MSK+LA+Y  
Sbjct: 981  IFSKFLLGKTTKECYDAVAKVADQWLDILFGKGVTLSDEELVELISENRSMSKTLAEYEG 1040

Query: 1018 QKSCAVTTARRLSDFLGDTMVKDKGLRCQYIVACEPQGTPVSERAVPVAIFETDAEIMKF 1077
            QKS +++TARRL++FLG+ MVKDKGL C+YI++ +P G PV+ERAVPV IF  +  I   
Sbjct: 1041 QKSTSISTARRLAEFLGEQMVKDKGLSCRYIISAKPIGAPVTERAVPVTIFTAEQSIKSH 1100

Query: 1078 YLRKWCKTSS--DVGIRSIVDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLY 1135
            YLRKW K +S  D  IRSI+DW YY +R  S +QKIITIPAA+QK+ NPVPR+ HPDWLY
Sbjct: 1101 YLRKWLKDNSLTDFDIRSILDWDYYIERFGSVVQKIITIPAALQKIPNPVPRIQHPDWLY 1160

Query: 1136 KKVREKEDKFRQRKLVDIFSSLKKDDFLNKTCNAETNLMDENVEDLEDFPKKRRNSVNGP 1195
            K++   +DKFRQ KL D+F   ++              +++++EDL        +SV G 
Sbjct: 1161 KRIANSDDKFRQHKLTDMFEKQRE--------------INQDMEDL-----GVGSSVPG- 1200

Query: 1196 RPIVRCFEVNNEQKTVKTTDQVDSLRQQLEPSEVSDQQPSSQNAIDTENIDRIVDYKGWL 1255
            +P         +Q  V+  +     RQQ E  E++         ++    D   DY  ++
Sbjct: 1201 KP---------KQAVVRKKN-----RQQTEEEELA-------KILEISVPDPDEDYSAFI 1239

Query: 1256 ELKKRKWKDNLDRRKKQKLGSLRASHQANGVSESLGDMINHKEAQRRTGVGSYFRRQETA 1315
            ++ +++WK    R  K+K GS +AS    GVS             R+T +G  F+     
Sbjct: 1240 KVMRKRWK--AQRAFKRKHGS-KASRNEAGVS-------------RQTALG-MFQDHSLG 1282

Query: 1316 MTRCHWQIIQLVPSSQSGVFLAWVVVEGIMVRIPITVPRLFYLNSKD-----PIVEKFPG 1370
             +   W I+Q+ PS + G F  W+ + G   ++ + +PR FYLN K         E++  
Sbjct: 1283 FSGSSWDIVQVYPSVRPGEFRLWLSLGGNFQQVRLRIPREFYLNLKSVPDEGVFAEEYLV 1342

Query: 1371 RRVNKTLPHGRRSFNLIEVMIDE 1393
             +V +TLP  +   NL ++ + E
Sbjct: 1343 EKVIRTLPRDQPCLNLFKLTVPE 1365



 Score =  321 bits (822), Expect = 3e-84,   Method: Compositional matrix adjust.
 Identities = 194/631 (30%), Positives = 319/631 (50%), Gaps = 69/631 (10%)

Query: 1413 EVLGWQQNAAKIGMQRCAASSQWFNERISLARYAHI------------------------ 1448
            E L W    +K  +      S W NER+ LA++  +                        
Sbjct: 1591 ESLMWLPKISKRMIGMYFRMSTWINERVGLAKHYDVPVGNIERDAPIQLADISFARRLIK 1650

Query: 1449 ----LWISDDGVPDLGGTSEE--DECFADEVHQPV-LTYPGAYRKVSVELKIHHLSVNAL 1501
                LW S    PDLGG  ++   + FADE   P+  + PG +  V +E+++  ++VN++
Sbjct: 1651 SDILLWWSHSSKPDLGGREQDVPPQQFADEGGGPIEFSNPGTFSNVVLEVELRDIAVNSI 1710

Query: 1502 LKSNQVNEMEGGGLFG--FDQ-----DMNSGPYNNELCGFDETTSSAPAFRVVKQLIQRC 1554
            L+S+ VNEMEG G     FD      D  +      L    E   S+  F ++K +++  
Sbjct: 1711 LQSSLVNEMEGAGSAATVFDSTSHTIDEYTKGQAKALVTLGEAVVSSQVFSILKSMVKSW 1770

Query: 1555 LTDAVTSG---NVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEFRKL 1611
              D   S    N F   ++ HL RW+ SP S+L DP +HR L  +M+KVF  LLAE ++L
Sbjct: 1771 YLDKARSADGQNAFGHLLVDHLLRWISSPVSRLFDPGIHRFLRGLMKKVFLQLLAEIKRL 1830

Query: 1612 GATIIFANFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLFMDQ 1671
            G+ I++A+F ++ I T K    +A AY   +L A  + ELF+ I L  V+FW  L+FMD 
Sbjct: 1831 GSGIVYADFGRIFILTSKPTAGSAAAYAQYVLSATTSAELFKHISLNTVNFWDYLVFMDL 1890

Query: 1672 YNYGGIPARADESLDDDSQVDIVSSWNIAEYLPKEIQDHFVLVVSEFMYIPWKHAQKLAA 1731
             N+GG+      S +   +  +   WNI +YLP  +Q +F +V++E++Y  +   +KL  
Sbjct: 1891 SNFGGVINHNPSSAEAPEEFHVDMKWNIPQYLPTALQTYFDVVIAEYIYAMYSEKRKLGL 1950

Query: 1732 S-----RASLQEGSSCTPSITVAAAENFESHIVQYVKGEISSYFTGKLLSIVRDAIHHMK 1786
                  RA  +EG          A + ++   +++ +  I+   T +LL IV D      
Sbjct: 1951 QYRTPLRAIAKEGGEL-------AVDEYKKQEIEFERSLITRIMTRRLLKIVTDMSKKQT 2003

Query: 1787 KM---------NNDQHNS---PGVMQTAANIHKVDAPLEFIKHVCAAFALDQNVQHDVLV 1834
            +          +N++ N    P +  +  N+   +  LEF+K  CA  AL ++V  +V +
Sbjct: 2004 EAATELASGVEDNEEANMFIFPLLPGSQTNMK--NPTLEFVKSTCAVLALSKDVAIEVTI 2061

Query: 1835 MRKNLLKYVRVREFAPEAEFRDPCPSFILPNVICSYCNDCRDLDLCRDMALLAQDWHCAM 1894
            +++NLL  ++VREF+ +A+F+ PC SF +  V+C  C   +DLDL RD+ LL  DW CA 
Sbjct: 2062 LKRNLLDVLKVREFSEDAQFKPPCESFKVTGVVCKACTFVQDLDLVRDVELLDDDWPCA- 2120

Query: 1895 PQCGQPYDREVMENALLQIVRQRERLYHLQDLVCIRCNQVKAAHLAEQCACAGSFRCKED 1954
              CG+  D+  +E  LL +V +    + +QDL C +C  +K++ LA  C C+G+++    
Sbjct: 2121 -SCGRSQDKMEVELTLLGMVDKLVASFAVQDLKCAKCGSIKSSDLAPHCHCSGAWKLTTS 2179

Query: 1955 ASDFRSKMQIFLNIANRQGFQLLQECTSWIL 1985
               F+ +M++  +IA     ++L+E T  I+
Sbjct: 2180 REMFKRRMEVINSIARYHELKMLEEHTESIM 2210


>gi|242017225|ref|XP_002429092.1| DNA polymerase epsilon, catalytic subunit A, putative [Pediculus
            humanus corporis]
 gi|212513956|gb|EEB16354.1| DNA polymerase epsilon, catalytic subunit A, putative [Pediculus
            humanus corporis]
          Length = 2244

 Score = 1342 bits (3473), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 697/1433 (48%), Positives = 966/1433 (67%), Gaps = 65/1433 (4%)

Query: 6    WDRQDGRRTKKQKLIRSAEEE-LEAKLGYDLFSEGDKRLGWLLTFASSSLEDEDTRKVYS 64
            +  + G  + ++++ +  E + +++K G+D      +R+G+L+    + + DED +K+ S
Sbjct: 9    FSNEAGEESSEKRIKKCIENDFVDSKFGFDRIKNPTERVGFLINMHVTEIIDED-KKLKS 67

Query: 65   CIDLYFVSQDGSTFKSKYKFRPYFYAATKEKMEMDVEAYLRRRYESQIADIEILEKEDLD 124
             +D YF+ +DGS FK+   F+PYFY   K+   ++V  YL+++Y   I  I+I+ KEDLD
Sbjct: 68   AVDYYFIEEDGSRFKATLCFQPYFYVLPKKGTLLEVSLYLKKKYIGIIDRIDIVSKEDLD 127

Query: 125  LKNHLSGLHKSYLKISFDTVQQLMDVKKDLLHVVERNQAKFDAAEAYESILTG------- 177
            L NHL+GL + +LK+SF ++ +L+ V+KD++  V++++        Y  +L         
Sbjct: 128  LPNHLTGLKQKFLKLSFYSINELLSVRKDIMAAVKKSKEISKVNNYYSELLKNLNSNYEN 187

Query: 178  -KREQRPQDFLDCIVDLREYDVPYHIRFAIDNDVRCGQWYDVSISSTG--PLLEKRVDLL 234
              ++++  D L+ I+D+REYD+PYHIR +IDN +  G WY+V I   G  P + K ++LL
Sbjct: 188  DVQQKKIVDHLENIIDVREYDIPYHIRVSIDNKIFVGSWYNVKIRGIGIQPDIIKNLELL 247

Query: 235  QRAEVHVCAFDIETTKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTP 294
            +  ++ V AFDIE TK PLKFP +D D I+MISYM+DGQGYLI NRE + +D++D EYTP
Sbjct: 248  EIPDIIVLAFDIECTKQPLKFPSSDTDQIIMISYMIDGQGYLINNREIISKDVDDFEYTP 307

Query: 295  KPEFEGYFKVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMS 354
            KPEFEGYF V N  NE  +L+ +F H+ +VKP I VTYNGD+FDWPF+E RA  +G  M 
Sbjct: 308  KPEFEGYFTVYNEPNEKSVLQRFFDHISDVKPHIMVTYNGDFFDWPFIENRATINGLNMQ 367

Query: 355  EELGFQCDKNQGECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPED 414
             E+GF        CR+    H+DC  WVKRDSYLP GS  LKAV K+KL YDP+E++PED
Sbjct: 368  YEIGFSAKNGVYFCRS--IIHMDCLCWVKRDSYLPVGSHNLKAVAKSKLRYDPVELDPED 425

Query: 415  MVRFAKEKPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEM 474
            M R A E+PQ++++YSVSDAVATYYLYM YVHPFIF+L TIIPM PDEVLRKGSGTLCE 
Sbjct: 426  MCRLAAEEPQVLSNYSVSDAVATYYLYMKYVHPFIFALCTIIPMEPDEVLRKGSGTLCET 485

Query: 475  LLMVQAYKANVICPNKHQSDPEKFYRN-HLLESETYIGGHVECLESGVFRSDLPTSFKLD 533
            LLMV+A+ AN+I PNK +    K   + H+L++ETY+GGHVE LESGVFR+D+P  F+L 
Sbjct: 486  LLMVEAFHANIIFPNKEEEVFNKLTTDGHVLDTETYVGGHVEALESGVFRADIPCRFRLI 545

Query: 534  PSAYEQLLNNLDRDLQYAIKVEGKMDLESVSNYDEVKNAIMEKLLRLQEEPIREECPLIY 593
            P A+E L+  L + +++AI+ E K+ LE+V N +EV   I  KL+ L+  P+R E P+IY
Sbjct: 546  PDAFEMLIKELRQTVEHAIEKEEKIPLENVLNLNEVIKEIEIKLIDLKNNPVRNENPVIY 605

Query: 594  HLDVAAMYPNIILTNRLQPPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEIFMGKRSDY 653
            HLDV AMYPNIILT+RLQP +IV +E C AC+FN PG  C +K++W+WRGE+    RS++
Sbjct: 606  HLDVGAMYPNIILTDRLQPYAIVNEEDCAACEFNTPGALCQKKMKWMWRGEMMPASRSEF 665

Query: 654  YHLKKQIESE-FVDGTNGHLSKSFLDLPKMEQQSRLKDRLKKYCQKAYKRVLDKPVTELR 712
              +++Q+E E F      +  ++F  L K EQ S  K RL  YC+KAYK+V     TE R
Sbjct: 666  QRIQQQLEIEKFPPLLPDNPQRAFHQLSKQEQASYEKKRLTDYCRKAYKKV-HITRTEER 724

Query: 713  EAGICMRENSFYVDTVRSFRDRRYEYKGLNKVWKGKLSEAKASGNSIKIQEAQDMVVLYD 772
            E  IC +ENSFYVDTVR+FRDRRYEYK L K  K +++EA + G++ +I+ A+++ +LYD
Sbjct: 725  ETTICQKENSFYVDTVRAFRDRRYEYKKLCKNAKQQVNEALSRGDASEIKSAKNLEILYD 784

Query: 773  SLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTD 832
            SLQLAHKCILNSFYGYVMRKGARW+SM+MAGVV + GA II  AR +IEK+G+PLELDTD
Sbjct: 785  SLQLAHKCILNSFYGYVMRKGARWHSMQMAGVVCHKGASIITKAREIIEKVGRPLELDTD 844

Query: 833  GIWCVLPGSFPENFTFKTKDL-KKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYE 891
            GIWC+LP SFPENF   T +  KKK+ ISYP  +LN  V    TN  Y  LVD  +  YE
Sbjct: 845  GIWCILPSSFPENFQIITTNTNKKKVNISYPNAVLNRMVKDQFTNHVYYDLVDSQNLIYE 904

Query: 892  THSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLI 951
              SE SI FEVDGPY AMILPASKEEG  +KKRYAVFN D +LAELKGFE+KRRGEL+LI
Sbjct: 905  QKSENSIFFEVDGPYLAMILPASKEEGKKLKKRYAVFNFDKSLAELKGFEVKRRGELQLI 964

Query: 952  KVFQAELFDKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKS 1011
            K+FQ+ +FD FL G ++E CY+AVA +A+ WLD+L ++   + DSEL + ISE+ +MSK 
Sbjct: 965  KIFQSSVFDAFLKGDSLENCYAAVAKIADYWLDILYSKADSLPDSELFELISENRSMSKK 1024

Query: 1012 LADYGEQKSCAVTTARRLSDFLGDTMVKDKGLRCQYIVACEPQGTPVSERAVPVAIFETD 1071
            L DYG QKS +++TARRL++FLGD MVKDKGL C+YI++ +P+G+PV+ERA+P+AIF+++
Sbjct: 1025 LEDYGAQKSTSISTARRLAEFLGDQMVKDKGLSCRYIISKKPEGSPVTERAIPLAIFQSE 1084

Query: 1072 AEIMKFYLRKWCKTSS--DVGIRSIVDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVV 1129
              + K YLRKW K +S  DV IR I+DW+YY +RL+ AIQKIITIPAAMQ VSNPVPRV 
Sbjct: 1085 PSVKKHYLRKWLKDNSLTDVDIRQILDWNYYIERLNGAIQKIITIPAAMQGVSNPVPRVK 1144

Query: 1130 HPDWLYKKVREKEDKFRQRKLVDIFSSLKKDDFLNKTCNAETNLMDENVEDLEDFPKKRR 1189
            HPDWL+KK+ EK D  +QRK+ + F+++ K              M+  + D+ED  K+++
Sbjct: 1145 HPDWLHKKILEKTDVLKQRKVNEFFNAVPKQR------------MENTMTDIEDVGKQQQ 1192

Query: 1190 NSVNGPRPIVRCFEVNNEQKTVKTT-----DQVDSLRQQLEPSEVSDQQPSSQNAIDTEN 1244
              +  P+ ++    ++ ++K V +      D     ++ L PS      P  +       
Sbjct: 1193 RKL--PK-LIHTHSISRKRKRVISNSFSEEDLSRHWKEVLGPSP-----PIGKTR----- 1239

Query: 1245 IDRIVDYKGWLELKKRKWKDNLDRRKKQKLGSLRASHQANGVSESLGDMINHKEAQRRT- 1303
             D IV    WL   KRKW+  L R +++ +       ++    ES    +     QRRT 
Sbjct: 1240 -DEIV---KWLCFHKRKWE--LQRCQRKLMLDDGPYKRSKITGESFISGV-----QRRTH 1288

Query: 1304 GVGSYFRRQETAMTRCHWQIIQLVPSSQSGVFLAWVVVEGIMVRIPITVPRLFYLNS--- 1360
             V  + ++ +  +    WQ+IQ V +++ GVF AW +V   + +I I VPR+FY+N    
Sbjct: 1289 TVDGFIKKIQQNILENTWQVIQYVKTNEPGVFKAWAIVGKDLHQIKIKVPRIFYVNQRSL 1348

Query: 1361 KDPIVEKFPGRRVNKTLPHGRRSFNLIEVMIDEDQFRKESKKLAALLADPEVE 1413
            K+  V+    ++VNK LP  +  ++L E  + E +F+  S+ L   +  P+VE
Sbjct: 1349 KNENVKNVVWKKVNKILPRSKPVYHLYEYSVPEQEFQAHSQDLLKSILTPDVE 1401



 Score =  291 bits (744), Expect = 3e-75,   Method: Compositional matrix adjust.
 Identities = 173/591 (29%), Positives = 309/591 (52%), Gaps = 57/591 (9%)

Query: 1442 LARYAHILWISDDGVPDLGGTSEEDECFA---DEVHQPVLTYPGAYRKVSVELKIHHLSV 1498
            L +   +LW SD+ +PD GGT  +D       DE+   V+   G Y  +SVE+ I  L+V
Sbjct: 1666 LLKNNFVLWCSDNELPDFGGTEADDSRLLGEFDELSTTVINKEGCYTSISVEMDIDALAV 1725

Query: 1499 NALLKSNQVNEMEG-GGLFGFD-------QDMNSGPYNNELCGFDETTSSAPAFRVVKQL 1550
            N LL+ N++NE EG      FD       +D+ SG  NN    +DE+   + AFR+++ L
Sbjct: 1726 NTLLQLNRMNEAEGISSSLAFDSAPQVVMEDLLSGS-NNHCVTYDESAVCSSAFRILRIL 1784

Query: 1551 IQRCLTDAVTSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEFRK 1610
                + +     N+ AD  + H YRWL S ++ L+DP + +I+H +M+K    LL+EF++
Sbjct: 1785 AGILIREVSLFKNILADYQISHFYRWLRSSNALLYDPSMRKIIHNLMKKFLIQLLSEFKR 1844

Query: 1611 LGATIIFANFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLFMD 1670
            LGA +IFANF+K+II+T K + S A  Y D + K ++ +ELF  ++L+   +WH LL++D
Sbjct: 1845 LGAIVIFANFNKIIINTKKNNFSDAIGYIDFIEKNIKQKELFHGVQLKASQYWHLLLWLD 1904

Query: 1671 QYNYGGIPA---------RADESLDD---------------------DSQVDIVSSWNIA 1700
              N+ G+ A           D   +D                     + +  IV +WN++
Sbjct: 1905 NSNFCGVQANILSKPNDQNGDSEKNDLENGISHEDSEDLIETREKETNEECPIVLNWNLS 1964

Query: 1701 EYLPKEIQDHFVLVVSEFMYIPWKHAQKLAASRASLQEGSSCTPSITVAAAENFESHIVQ 1760
            ++L  +I++ F  V++ +  + W + +    S+  + E         V  ++  +S I  
Sbjct: 1965 DFLLPDIKETFDEVIATYTNLLWSYIKTEIISKPLVVENDDDQCRADVVLSDTNKS-IEC 2023

Query: 1761 YVKGEISSYFTGKLLSIVRDAIHHMKKMNNDQHNSPGVMQTAANIHKVDAP-LEFIKHVC 1819
            + K  IS+  + +L  ++       +KMN     + G  +T     K   P L+F+K + 
Sbjct: 2024 FAKELISNKMSLELFGLI-------EKMNKAYPGTRGNKKTT----KFQFPTLDFVKSIS 2072

Query: 1820 AAFALDQNVQHDVLVMRKNLLKYVRVREFAPEAEFRDPCPSFILPNVICSYCNDCRDLDL 1879
               +L+   + +V  + +N+L+ + VREF  EA + DPC + IL  V+C  C+  RD+DL
Sbjct: 2073 KVLSLNITTEKEVETLNRNMLRLIGVREFDDEAVWVDPCKTVILTEVVCKICSHSRDIDL 2132

Query: 1880 CRD--MALLAQDWHCAMPQCGQPYDREVMENALLQIVRQRERLYHLQDLVCIRCNQVKAA 1937
            C+D  ++ + +      P C + Y+++ +E  LL +V++    Y +QDL C +C+++ A 
Sbjct: 2133 CKDVHISTINEITMLMCPVCHRAYNKDELEYLLLDVVQKNAMAYTIQDLQCGKCSEIAAD 2192

Query: 1938 HLAEQCACAGSFRCKEDASDFRSKMQIFLNIANRQGFQLLQECTSWILEVQ 1988
            +L E C C G++     +++  ++++   N+A      +L +C +W+L++Q
Sbjct: 2193 NLHEFCTCTGNYHPLLQSNNIITQLKTLKNVAINFSMPILLDCINWMLDLQ 2243


>gi|322708158|gb|EFY99735.1| DNA polymerase epsilon [Metarhizium anisopliae ARSEF 23]
          Length = 2213

 Score = 1342 bits (3472), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 688/1414 (48%), Positives = 929/1414 (65%), Gaps = 70/1414 (4%)

Query: 25   EELEAKLGYDLFSEGDKRLGWLLTFASSSLEDEDTRKVYSCIDLYFVSQDGSTFKSKYKF 84
            + ++   G+  +  G K+ GWL+    +++EDE      + +D YF+  DG+TFK+  ++
Sbjct: 51   QTIDENFGFGRYESGKKKEGWLVNVQPTAIEDERIPGGRAALDCYFIEHDGATFKATVEY 110

Query: 85   RPYFYAATKEKMEMDVEAYLRR-RYESQIADIEILEKEDLDLKNHLSGLHKSYLKISFDT 143
             PYF  A K+  E +VE +++R   +  I  I  +EK+DL++ NHL G  +++L++ F  
Sbjct: 111  DPYFLIAVKKGHESEVEEWIKRVPGDGCIKTIRRVEKDDLNMPNHLLGYRRTFLELKFAN 170

Query: 144  VQQLMDVKKDLLHVVERNQAKFDAAEAYESILTG-----------KREQRPQDFL----D 188
            V  LM  ++D++ V E+N+   +A +AY  ++T            + ++R  +      D
Sbjct: 171  VSDLMAARRDIMPVAEKNKKNMNAMDAYAEVVTANGNFDLFDDDLRTDERTNNSFAEASD 230

Query: 189  CIVDLREYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLLEKRVDLLQRAEVHVCAFDIET 248
             IVD+REYDVPYH+R  ID D+R G+WY + +      +    D    A+  V AFDIET
Sbjct: 231  YIVDIREYDVPYHVRVMIDLDIRVGKWYYIEVKHGATKILPNEDRSLPADPVVLAFDIET 290

Query: 249  TKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNVN 308
            TKLPLKFPDA  D +MMISYM+DGQG+LI NRE + EDI D +YTPKPE+ G F + N  
Sbjct: 291  TKLPLKFPDAAIDQVMMISYMIDGQGFLITNREIISEDIGDFDYTPKPEYPGPFMIFNEP 350

Query: 309  NEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDKNQGEC 368
            NE  ++  +F H++E +P +  TYNGD+FDWPF+E RA+ +G  M +E+G++ D ++ + 
Sbjct: 351  NEKAVIERFFLHIKEARPTVIATYNGDFFDWPFVEARASVNGIDMYQEIGWKKD-SEDQF 409

Query: 369  RAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQMMAS 428
            +  +  H+DCF WV RDSYLPQGS+GLKAVT AKLGYDP E++PE M  +A E+PQ +A 
Sbjct: 410  KCNYGVHMDCFHWVNRDSYLPQGSRGLKAVTVAKLGYDPDELDPELMTPYASERPQTLAE 469

Query: 429  YSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVICP 488
            YSVSDAVATY+LYM YVHPFIFSL TI+P+  D+ LRKG+GTLCEMLLMVQAY+  ++ P
Sbjct: 470  YSVSDAVATYFLYMKYVHPFIFSLCTILPLGGDDTLRKGTGTLCEMLLMVQAYQKEIVLP 529

Query: 489  NKHQSDPEKFYRNHLLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQLLNNLDRDL 548
            NKHQS  E F+  HLL+SETY+GGHVE +E+GVFR+D+P  F +D  A ++LL ++D  L
Sbjct: 530  NKHQSPKEAFWDGHLLDSETYVGGHVESIEAGVFRADIPVDFAVDTGAIDELLRDIDAAL 589

Query: 549  QYAIKVEGKMDLESVSNYDEVKNAIMEKLLRLQEEPIREECPLIYHLDVAAMYPNIILTN 608
            ++ I VE K  L  V NYDEVK  I+ KL++L+E P R E PLIYHLDVA+MYPNI+ TN
Sbjct: 590  KFVITVEEKKSLADVENYDEVKEQIVAKLMKLKETPHRRERPLIYHLDVASMYPNIMTTN 649

Query: 609  RLQPPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYYHLKKQIESE-FVDG 667
            RLQP S++ +  C ACDFNRPGKTC R+L W WRGE    KR +Y  ++  +E+E F   
Sbjct: 650  RLQPDSMIDESDCAACDFNRPGKTCDRRLPWAWRGEYLPAKRDEYNMIRHALENEKFPGK 709

Query: 668  TNGHLSKSFLDLPKMEQQSRLKDRLKKYCQKAYKRVLDKPVTELREAGICMRENSFYVDT 727
            T     ++F DL   EQ S ++ RL+ Y QK Y ++ D   T +REA IC REN FY++T
Sbjct: 710  TPQAPMRTFADLSADEQASLVRKRLQIYSQKVYHKIHDS-TTIVREAIICQRENPFYINT 768

Query: 728  VRSFRDRRYEYKGLNKVWKGKLSEAKASGNSI-KIQEAQDMVVLYDSLQLAHKCILNSFY 786
            VR FRDRRY+YKG  KVWKGK    K+SG S  ++  A+ M++LYDSLQLAHK ILNSFY
Sbjct: 769  VRDFRDRRYDYKGKAKVWKGKTDSLKSSGASASEVDAAKKMIILYDSLQLAHKVILNSFY 828

Query: 787  GYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLPGSFPENF 846
            GYVMRKG+RWYSMEMAGV   TGA IIQ AR L+E++G+PLELDTDGIWC+LP +FPENF
Sbjct: 829  GYVMRKGSRWYSMEMAGVTCLTGATIIQLARQLVERLGRPLELDTDGIWCMLPATFPENF 888

Query: 847  TFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEFEVDGPY 906
             FK K+  KKL+ISYPCVMLN  V    TN QYQTLVDP +  YETHS+ SI FEVDGPY
Sbjct: 889  AFKLKN-GKKLSISYPCVMLNHLVHDKFTNHQYQTLVDPKTFKYETHSDNSIFFEVDGPY 947

Query: 907  KAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFLHGS 966
            KAMILP SKEE   +KKRYAVFNDDG+LAELKGFE+KRRGELKLIK+FQ ++F  FL G 
Sbjct: 948  KAMILPTSKEEDKNLKKRYAVFNDDGSLAELKGFEVKRRGELKLIKIFQQQIFKFFLEGE 1007

Query: 967  TIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLADYGEQKSCAVTTA 1026
             + +CYSAVA VANRWLD+L N+G  +AD EL++ ISE+ +MSK+L +YG QKS ++TTA
Sbjct: 1008 DLTQCYSAVAKVANRWLDVLHNKGSTLADEELMELISENRSMSKTLEEYGSQKSTSITTA 1067

Query: 1027 RRLSDFLGDTMVKDKGLRCQYIVACEPQGTPVSERAVPVAIFETDAEIMKFYLRKWCKTS 1086
            +RL+DFLG+ MVKDKGL C++I+   P+  PV+ERAVPVAIF  +  I + YL+KW K  
Sbjct: 1068 KRLADFLGEQMVKDKGLNCKFIICARPRNAPVTERAVPVAIFSAEESIKRTYLKKWLKEE 1127

Query: 1087 -SDVGIRSIVDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLYKKVREKEDKF 1145
             ++   R+++DW YY +RL S IQK+ITIPAA+QKV NPVPRV HPDWL +++  K+DK 
Sbjct: 1128 PTNTDPRALLDWDYYLERLGSVIQKLITIPAALQKVRNPVPRVPHPDWLQRRINIKDDKM 1187

Query: 1146 RQRKLVDIFSSLKKDDFLNKTCNAETNLMDENVEDLEDFPKKRRNSVNGPRPIVRCFEVN 1205
            +Q+KL D+F+     D         TN     +EDLEDF     N +  P+ +      +
Sbjct: 1188 KQKKLTDLFTKEPLADI--------TNTNGSRMEDLEDF----GNKLLKPKQVSAAVASS 1235

Query: 1206 NEQKTVKTTDQVDSLRQQLEPSEVSDQQPSSQNAIDTENIDRIVDYKGWLELKKRKWKDN 1265
                TV+        R+  EPSE +D   +    +   +     +Y  +L+ +K+KWK  
Sbjct: 1236 QPAPTVQK-------RKSPEPSENTDPMAALPKVMPNPS----ENYPAFLKYQKQKWKLQ 1284

Query: 1266 LDRR-KKQKLGSLRASHQANGVSESLGDMINHKEAQRRTGVGSYFRRQETAMTRCHWQII 1324
               R ++++L   R     N + +S                   F RQ        WQ++
Sbjct: 1285 KQARIRRRQLFGDRRGLTGNNIQQS-------------------FMRQAHVTFMNTWQLL 1325

Query: 1325 QLVPSSQSGVFLAWVVVEGIMVRIPITVPRLFYLNSK-----DPIVEKFPGRRVNKTLPH 1379
             L  +   GV  A V+++  +  + + VPR  +LN K     D  +      +VN TLP+
Sbjct: 1326 HLQATDSPGVVTAHVLIDAKIHAVKVKVPRQVFLNLKGSELPDVDIAGCEVEQVNYTLPN 1385

Query: 1380 GRRSFNLIEVMIDEDQFRKESKKLAALLADPEVE 1413
            G  S +L ++ + ED +  E+ K + L   P VE
Sbjct: 1386 GHPSSHLFKLTVPEDVYFSEAAKFSLLFNHPSVE 1419



 Score =  241 bits (616), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 168/610 (27%), Positives = 284/610 (46%), Gaps = 63/610 (10%)

Query: 1408 ADPEVEVLGWQQNAAKIGMQRCAASSQWFNERISLARYAHI------------------- 1448
             D  +  LGWQ   A+  +        W     +LARY  +                   
Sbjct: 1616 TDSSLPPLGWQAVVARRLVGHYLGLGSWILHLTALARYGDVPLCNLEREDPRFLIDIAYA 1675

Query: 1449 ---------LWISDDGVPDLGGTSEEDECFA--DEVHQPVLTYPGAYRKVSVELKIHHLS 1497
                     LW S    PD  G  E+D+     D V  P +  PG +  V ++L + +L+
Sbjct: 1676 RRLQANGVVLWWSAGPRPDHAGY-EKDDILGPLDTVKMPNVNNPGTFASVCIDLDVRNLA 1734

Query: 1498 VNALLKSNQVNEMEGGGLFGFDQDMNSGPYNNELCGFDETTSSAPAFRVVKQLIQRCLTD 1557
            +N +L S+ +NE+EG     F+    SG   +E    D   +++    V++++++    +
Sbjct: 1735 INTILTSSLINELEGADSVSFNP---SGADGSETLASDNAFANSGVL-VLREMVKAWWAE 1790

Query: 1558 AVTSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEFRKLGATIIF 1617
            A   G+  AD ++QHL RW+ +P S ++D  LH  +  + +K F  L+A+FR++G+ ++F
Sbjct: 1791 AC-KGSTMADVLVQHLVRWVENPDSFMYDRALHYYVQMMSRKAFQQLMADFRRVGSQVVF 1849

Query: 1618 ANFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLFMDQYNYGGI 1677
            AN +++I+ T K ++  A AY   ++K+++++ LF +I+LE   +W  L++ D++NYGG 
Sbjct: 1850 ANANRLILQTTKAEVGNAFAYSQYIIKSIKSKPLFHFIDLEIKEYWDYLVWYDEFNYGG- 1908

Query: 1678 PARADESLDDDSQ-VDIVSSWNIAEYLPKEIQDHFVLVVSEFMYIPWKHAQKLAASRASL 1736
                 E ++ D Q ++ +  W +A +LP  +Q  F   V  F+ +   H  K  A+    
Sbjct: 1909 -KGCQEVIEADEQNLETIMHWQMATFLPVRLQPIFQEWVIAFIQL--MHNLKRPAN---- 1961

Query: 1737 QEGSSCTPSITVAAAENFESHIVQYVKGEISSYFTGKLLSIV-----RDAIHHMKKMNND 1791
                  TP +T     N E+   Q + G+       K ++ +     R+ +H     +  
Sbjct: 1962 -HDPDSTPRLTQLPNRNDETEESQIILGKAYEKPLKKAIASLISQQKRELLHPELAEDYS 2020

Query: 1792 QHNSPGVMQTAANIHKVDAP-LEFIKHVCAAFALDQNVQHDVLVMRKNLLKYVRVREFAP 1850
              + PG   T        AP LE +K +    +LD+N+  +  ++RK LL    VREF+ 
Sbjct: 2021 FPSLPGSHLTPR------APVLELVKSLMQILSLDKNITLEARLLRKELLALFDVREFSK 2074

Query: 1851 EAEFRDPCPSFILPNVICSYCNDCRDLDLCRDMALLAQD---WHCAMPQCGQPYDREVME 1907
            E  F +P  S  L  + C  C   RDLDLCRD  L   D   W C+   CG  YDR  +E
Sbjct: 2075 EGTFANPSESLKLMQISCDSCTMARDLDLCRDEDLQGSDDRGWQCSF--CGTEYDRVAIE 2132

Query: 1908 NALLQIVRQRERLYHLQDLVCIRCNQVKAAHLAEQCACAGSFRCKEDASDFRSKMQIFLN 1967
              LL +V      +  QDL C RC  ++   L E C C+G ++      +   K+ +   
Sbjct: 2133 ERLLSMVEAWTVEWATQDLKCSRCGALRVNDLMEHCTCSGEWKEIVSRQETMRKLTVMRR 2192

Query: 1968 IANRQGFQLL 1977
            +A     ++L
Sbjct: 2193 VAKYYSLRML 2202


>gi|395331311|gb|EJF63692.1| hypothetical protein DICSQDRAFT_178966 [Dichomitus squalens LYAD-421
            SS1]
          Length = 2254

 Score = 1341 bits (3471), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 688/1446 (47%), Positives = 921/1446 (63%), Gaps = 105/1446 (7%)

Query: 9    QDGRRTKKQKLIRSAEEELEAKLGYDLFSEGDKRLGWLLTFASSSLEDEDTRKVYSCIDL 68
            +DG +  ++       +E++ KLG+   +EG  R GWL+    + ++D D     + +D 
Sbjct: 49   EDGNQLAERFEQVKTNDEVDEKLGFARVAEGPTREGWLINMHPTLMKDADWPGGKAAVDF 108

Query: 69   YFVSQDGSTFKSKYKFRPYFYAATKEKMEMDVEAYLRRRYESQIADIEILEKEDLDLKNH 128
            YF+  DG  FK   ++ PYFY A K  ME  +E +L ++YE  I  I    KEDL + NH
Sbjct: 109  YFIQDDGGMFKCTLQYEPYFYIACKSGMETVIEEWLLKKYEGIICRITRERKEDLQMPNH 168

Query: 129  LSGLHKSYLKISFDTVQQLMDVKKDLLHVVERNQAKFDAAEAYESILTGKREQRP----- 183
            L G  + +L++ F  V  L+ V+ D++ +   N AK DA +AY  ++T            
Sbjct: 169  LMGHRRLFLQLHFRNVSDLLTVRCDIMPLALANSAKLDAVDAYAEVVTATAAPTTNIELE 228

Query: 184  ------------------------QDFLDCIVDLREYDVPYHIRFAIDNDVRCGQWYDVS 219
                                    +D  + IVD+REYDVPY++R A+DN++R G WY +S
Sbjct: 229  GEWAADSQHAGSSTSAHAHARWGDKDPREGIVDIREYDVPYYLRVAMDNEIRVGLWYAIS 288

Query: 220  ISSTGPLLEKRVDLLQRAEVHVCAFDIETTKLPLKFPDADYDIIMMISYMLDGQGYLIIN 279
                 P  +     ++RA+  V AFDIETTK PLKFPD   D +MMISYM+DGQGYLI N
Sbjct: 289  FVQGQPAFKLLTARVKRADPVVMAFDIETTKAPLKFPDQAIDQVMMISYMVDGQGYLITN 348

Query: 280  RECVGEDIEDLEYTPKPEFEGYFKVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDW 339
            RE V EDIED EYTPK  +EG F V N  +E   +R WF+H+QEVKP +  T+NGD+FD+
Sbjct: 349  REIVSEDIEDFEYTPKEGYEGPFIVFNEPDEAATIRRWFSHIQEVKPTVMATFNGDFFDF 408

Query: 340  PFLETRAAHHGFKMSEELGFQCDKNQGECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVT 399
            PFL+ R+  HG  M  E GF  D ++ E +++   H+DCF WVKRDSYLPQGSQGLKAVT
Sbjct: 409  PFLDARSKVHGIDMFLESGFAKD-SEDEYKSRGCVHMDCFRWVKRDSYLPQGSQGLKAVT 467

Query: 400  KAKLGYDPLEVNPEDMVRFAKEKPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMS 459
             AKLGYDP+E++PE M  +A E+PQ++A YSVSDAVATYYLYM YVHPFIFSL  IIP+ 
Sbjct: 468  TAKLGYDPIELDPELMTPYAMEQPQVLAQYSVSDAVATYYLYMKYVHPFIFSLCNIIPLC 527

Query: 460  PDEVLRKGSGTLCEMLLMVQAYKANVICPNKHQSDPEKFYRNHLLESETYIGGHVECLES 519
            PDEVLRKG+GTLCE LLMV+A +  +I PN+H+      Y  HL+ SETY+GGHVE LE+
Sbjct: 528  PDEVLRKGTGTLCETLLMVEAIRGQIIMPNRHEESHGTMYEGHLVASETYVGGHVEALEA 587

Query: 520  GVFRSDLPTSFKLDPSAYEQLLNNLDRDLQYAIKVEGKMDLESVSNYDEVKNAIMEKLLR 579
            GVFRSD+ T FK++PSA +QL++ LD  L + I  E K  LESV+NYDEVK  I  KL  
Sbjct: 588  GVFRSDIVTHFKIEPSAVQQLIDQLDAALTFCIVEESKASLESVTNYDEVKAEIQAKLEE 647

Query: 580  LQEEPIREECPLIYHLDVAAMYPNIILTNRLQPPSIVTDEVCTACDFNRPGKTCLRKLEW 639
            +++ P R + PLIYHLDVAAMYPNI+L+NRLQP S+V +  C  CDFNRPGKTC R++ W
Sbjct: 648  MRDNPQRMDSPLIYHLDVAAMYPNIMLSNRLQPDSVVDEATCAVCDFNRPGKTCDRRMTW 707

Query: 640  VWRGEIFMGKRSDYYHLKKQIESE-FVDGTNGHLSKSFLDLPKMEQQSRLKDRLKKYCQK 698
             WRGE F  +R +Y  +K  +  E F     G   + F+DL + EQ + L  RL  Y ++
Sbjct: 708  AWRGEYFPARRDEYNMIKHALNQETFPPKKPGGPQRKFVDLSEAEQTALLHKRLGDYSRR 767

Query: 699  AYKRVLDKPVTELREAGICMRENSFYVDTVRSFRDRRYEYKGLNKVWKGKLSEAKASGNS 758
             YK++ D  + E REA IC REN FY+DTVR FRDRRYEYKGL+K WK  L        S
Sbjct: 768  VYKKIKDTKI-ENREAIICQRENPFYIDTVRRFRDRRYEYKGLHKTWKKNLDAYVGEHRS 826

Query: 759  I-KIQEAQDMVVLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNAR 817
            I ++ EA+ M+VLYDSLQLAHKCILNSFYGYVMRKGARW+SMEMAG+   TGA IIQ AR
Sbjct: 827  IAEVDEAKKMIVLYDSLQLAHKCILNSFYGYVMRKGARWHSMEMAGITCLTGATIIQMAR 886

Query: 818  LLIEKIGKPLELDTDGIWCVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTND 877
             L+E+IG+PLELDTDGIWC+LPG FPENF FK  +  K +  SYPC MLN  V    TN 
Sbjct: 887  QLVEQIGRPLELDTDGIWCMLPGVFPENFKFKLAN-GKAIAFSYPCTMLNHLVHAKFTNH 945

Query: 878  QYQTLVDPVSKTYETHSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAEL 937
            QY  L DP +  Y+ HSE SI FE+DGPYKAMILP+SKEE  L+KKRYAVFNDDG+LAEL
Sbjct: 946  QYHEL-DPETGEYKVHSENSIFFELDGPYKAMILPSSKEEDKLLKKRYAVFNDDGSLAEL 1004

Query: 938  KGFEIKRRGELKLIKVFQAELFDKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSE 997
            KGFE+KRRGEL+LIK+FQ+++F+KFL G+T+EECY+AVA VA+RWL++L +  +D++D E
Sbjct: 1005 KGFEVKRRGELQLIKIFQSQIFEKFLLGTTLEECYAAVAEVADRWLNVLVSHAEDLSDDE 1064

Query: 998  LIDYISESSTMSKSLADYGEQKSCAVTTARRLSDFLGDTMVKDKGLRCQYIVACEPQGTP 1057
            L++ I+E+ +MSK+L++YG QKS +++TARRL++FLGD MVKDKGL C++I++ +P G P
Sbjct: 1065 LVELIAENRSMSKTLSEYGGQKSTSISTARRLAEFLGDQMVKDKGLACKFIISAKPMGAP 1124

Query: 1058 VSERAVPVAIFETDAEIMKFYLRKWCKTSS--DVGIRSIVDWSYYKQRLSSAIQKIITIP 1115
            V+ERAVPVAIF  +  + + YLRKW K +S     +RSI+DW YY +RL S IQK+ITIP
Sbjct: 1125 VTERAVPVAIFSAEESVKRTYLRKWLKDNSLTSFDLRSILDWDYYIERLGSVIQKLITIP 1184

Query: 1116 AAMQKVSNPVPRVVHPDWLYKKVREKEDKFRQRKLVDIFSSLKKDDFLNKTCNAETNLMD 1175
            AAMQKV+NPVPR+ HPDWL+++V   EDKFRQ K+ D F    + +        E    D
Sbjct: 1185 AAMQKVANPVPRIHHPDWLHRRVVAMEDKFRQHKVTDFFKRAGEGELAQTQSQRE----D 1240

Query: 1176 ENVEDLEDFPKKRRNSVNGPRPIVRCFEVNNEQKTVKTTDQVDSLRQQLEPSEVSDQQPS 1235
            ++V D+ED   +R     G RP+        ++K  +         Q  E      Q   
Sbjct: 1241 DDV-DMEDGMAQR---PRGFRPMAVV-----KRKPRREESAEAEESQFAELPRDPKQS-- 1289

Query: 1236 SQNAIDTENIDRIVDYKGWLELKKRKWKDNLDRRKKQKLGSLRASHQANGVSESLGDMIN 1295
                           Y+ WL + +++W                            G  ++
Sbjct: 1290 ---------------YRSWLHVMRKRWS---------------------------GRGVD 1307

Query: 1296 HKEAQRRTGVGSYFR--RQETAMTRCHWQIIQLVPSSQSGVFLAWVVVEGIMVRIPITVP 1353
            + +A     V + FR  RQ+ +    HW I+Q+ P+   G F  W+ + G +  +P+ +P
Sbjct: 1308 NSDAATSLAVPAMFRGVRQKQS---THWDIVQIRPNRTPGRFTLWLSINGSLTAVPLRIP 1364

Query: 1354 RLFYLNSKDPIV------EKFPGRRVNKTLPHGRRSFNLIEVMIDEDQFRKESKKLAALL 1407
            R FY++ + P        E +  ++V +++P  R   NL ++ + ED + +  +    + 
Sbjct: 1365 REFYIHLRTPPKKDQFNHELYQCQKVARSMPRDRPCVNLYKISVREDLYVEGHEHFIDIT 1424

Query: 1408 ADPEVE 1413
             DP V+
Sbjct: 1425 NDPNVD 1430



 Score =  285 bits (729), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 188/632 (29%), Positives = 309/632 (48%), Gaps = 67/632 (10%)

Query: 1412 VEVLGWQQNAAKIGMQRCAASSQWFNERISLARY-----AH------------------- 1447
            ++V  WQ + A+  + R  +   W +  I++A Y      H                   
Sbjct: 1629 LDVFPWQTSVAQKLINRYLSLGPWLDRTIAMADYYDVPVGHIEGDQPLLLADIEFARRLT 1688

Query: 1448 ----ILWISDDGVPDLGGTSEEDECFADEVHQPVLTYPGAYRKVSVELKIHHLSVNALLK 1503
                ILW S    PDLGG  EED    +E+ +     PG Y  V +E+ + +L+V+A+L 
Sbjct: 1689 SQDVILWWSPGDRPDLGGI-EEDNRPQEELAKTEFKSPGCYSNVCLEIAVRNLAVDAVLH 1747

Query: 1504 SNQVNEMEG-GGLFGFDQDMNSGPYNN----ELCGFDETTSSAPAFRVVKQLIQRCLTDA 1558
            S  VNE+EG GG   FD       Y+     +     E+  S   F ++K L++  + D 
Sbjct: 1748 SVIVNELEGSGGATAFDASRTLDEYSKGESMQDLTLGESNVSPHIFSILKGLVKAWMVDK 1807

Query: 1559 VTSGNVFADAI--LQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEFRKLGATII 1616
            +  GN  + A   + H +RW+ S  S ++D  +HR +H +M+K F  +LAEF++LG+ ++
Sbjct: 1808 I-QGNFESPATIAIDHFWRWISSTASNMYDTGIHRFVHGLMRKTFIQMLAEFKRLGSHVV 1866

Query: 1617 FANFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLFMDQYNYGG 1676
            +A+ S++++ T K     A AY   +  A+ + ELF+ + L    F+  L+FMD+ NYG 
Sbjct: 1867 YADLSRILLVTSK-PPGTAHAYATYITTAVTSHELFQHVYLHTERFYDFLIFMDEANYGA 1925

Query: 1677 IPARADESLDDDSQVDIVSSWNIAEYLPKEIQDHFVLVVSEFMYIPWKHAQK-LAASRA- 1734
            +      +++   ++ I   WNI  +LP  IQ  F  VV  F+   ++ AQK   A+R  
Sbjct: 1926 VVCENPLAIEPPEELAIEMRWNIQSFLPPAIQADFRAVVRYFLVEFFRTAQKSQGATRVP 1985

Query: 1735 --SLQEGSSCTPSITVAAAENFESHIVQYVKGEISSYFTGKLLSIVRDAIHHMKKMNNDQ 1792
              +LQ G +  P  T   A   E   +   +  +S   T ++L ++   +   +    D+
Sbjct: 1986 LRALQNGGA--PDATPRDAAKVEE--LSACREFVSRKLTRRMLRVLGGVLDRHRDALTDE 2041

Query: 1793 HNSPGV-----MQTAANIHKVDAPLEFIKHVCAAFALDQNVQHDVLVMRKNLLKYVRVRE 1847
              S        +   +++   +  LE +K  CA FAL +    +V ++++NLL  V VRE
Sbjct: 2042 DPSALAQWEFPILPGSHLPLSNPGLELVKFTCAVFALAKEYTLEVGLLKRNLLDLVGVRE 2101

Query: 1848 FAPEAEFRDPCPSFILPNVICSYCNDCRDLDLCRDMALLAQD--------------WHCA 1893
            FA EA F +PC    L  V C +C+  +D D CRD  LL                 W C 
Sbjct: 2102 FASEAAFVNPCEPLKLSAVPCRHCDSMKDFDFCRDPVLLPSSSSSSGNASAHAQARWLCT 2161

Query: 1894 MPQCGQPYDREVMENALLQIVRQRERLYHLQDLVCIRCNQVKAAHLAEQCACAGSFRCKE 1953
              +CG  YDR  +E AL+++V + ER +  QDL C RC+QV+A +++  C C+G+F    
Sbjct: 2162 --KCGGEYDRAGIEFALVRLVHELERRFAQQDLRCARCSQVRADNVSRHCGCSGAFVLTM 2219

Query: 1954 DASDFRSKMQIFLNIANRQGFQLLQECTSWIL 1985
            + +D R +++  +N+A   G   L+EC   +L
Sbjct: 2220 NKADVRRRLRTVVNVALAHGMGRLKECAQTLL 2251


>gi|406864625|gb|EKD17669.1| DNA polymerase epsilon [Marssonina brunnea f. sp. 'multigermtubi'
            MB_m1]
          Length = 2225

 Score = 1341 bits (3471), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 697/1428 (48%), Positives = 944/1428 (66%), Gaps = 82/1428 (5%)

Query: 16   KQKLIRSAEEELEAKLGYDLFSEGDKRLGWLLTFASSSLEDEDTRKVYSCIDLYFVSQDG 75
            K++ IR A E  EA+ G+  +  G K+ GWL+   ++S+ED       + +D YF+  DG
Sbjct: 42   KREAIRLAHEIDEAQ-GFARYEAGKKKTGWLVNVRATSVEDAKNPDGRAALDCYFLEDDG 100

Query: 76   STFKSKYKFRPYFYAATKEKMEMDVEAYLRRRYESQIA-DIEILEKEDLDLKNHLSGLHK 134
             TFK+  ++ PYF  A K   E + E +L+R     +   +  +EKEDL + NHL G  +
Sbjct: 101  GTFKATLEYDPYFLVAVKRGHEAEAEEWLKRAPGGGVVKSMRKVEKEDLQMPNHLLGYRR 160

Query: 135  SYLKISFDTVQQLMDVKKDLLHVVERNQAKFDAAEAYESILTGKR-----------EQRP 183
            ++ ++ F     L+  ++D++ + E+N+   +A + Y  + +              E+R 
Sbjct: 161  TFFELRFANSADLLAARRDIMPIAEKNKKNMNAMDTYAEVASANAGFDLFDDDRNDERRV 220

Query: 184  Q----DFLDCIVDLREYDVPYHIRFAIDNDVRCGQWYDVSIS---STGPLLEKRVDLLQR 236
                 D  D IVD+RE+DVPYH+R  ID D+R G+WY V      +T   LE+R   L+R
Sbjct: 221  NVSVADASDFIVDIREWDVPYHVRVMIDLDIRTGKWYSVEAKHGVTTMKCLEER---LER 277

Query: 237  AEVHVCAFDIETTKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKP 296
            A+  V A+DIETTKLPLKFPDA  D IMMISYM+DGQG+LI NRE V EDIED EYTPKP
Sbjct: 278  ADPVVMAYDIETTKLPLKFPDATIDQIMMISYMIDGQGFLITNREIVSEDIEDFEYTPKP 337

Query: 297  EFEGYFKVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEE 356
            E+EG F + N  +E  ++  +F H++E +P +  TYNGD+FDWPF++ RA+ +G  M +E
Sbjct: 338  EYEGPFMIFNEPDEKAVIERFFLHIKEARPTVIATYNGDFFDWPFVDARASVNGIDMYQE 397

Query: 357  LGFQCDKNQGECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMV 416
            +G++       C   ++ H+DCF WV RDSYLPQGS+GLKAVT AKLGYDP E++PE M+
Sbjct: 398  IGWRKGPEDQYC-CDYSAHMDCFHWVNRDSYLPQGSRGLKAVTTAKLGYDPDEIDPELML 456

Query: 417  RFAKEKPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLL 476
            ++A EKPQ+++ YSVSDAVATYYLYM YVHPFIFSL TIIP+ PD VLRKG+GTLCEMLL
Sbjct: 457  KYASEKPQVLSEYSVSDAVATYYLYMKYVHPFIFSLCTIIPLGPDAVLRKGTGTLCEMLL 516

Query: 477  MVQAYKANVICPNKHQSDPEKFYRNHLLESETYIGGHVECLESGVFRSDLPTSFKLDPSA 536
            MVQAY+  ++ PNKH S  E F+  HLLESETY+GGHVE +E+GVFR+D+P +F +D +A
Sbjct: 517  MVQAYQKEIVLPNKHVSPKEAFWDGHLLESETYVGGHVESIEAGVFRADIPVNFAVDTTA 576

Query: 537  YEQLLNNLDRDLQYAIKVEGKMDLESVSNYDEVKNAIMEKLLRLQEEPIREECPLIYHLD 596
             ++LL +LD  L+++I VE K  L+ V+NYDEVK  IM++L  L++   R E PLIYHLD
Sbjct: 577  IDELLADLDAALKFSIVVEEKKSLDDVTNYDEVKQQIMDRLNSLKKTANRSERPLIYHLD 636

Query: 597  VAAMYPNIILTNRLQPPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYYHL 656
            VA+MYPNI+ TNRLQP S++ +  C ACDFNRPGKTC R++ W WRGE    KR +Y  +
Sbjct: 637  VASMYPNIMTTNRLQPDSMIQEADCAACDFNRPGKTCDRRMPWAWRGEYLPAKRDEYNMI 696

Query: 657  KKQIESEFVDG--TNGHLSKSFLDLPKMEQQSRLKDRLKKYCQKAYKRVLDKPVTELREA 714
            K  +E+E   G   N  + ++F DL   EQ + ++ RL+ Y QK Y ++ +    E REA
Sbjct: 697  KHSLENERFPGKWPNSPM-RTFQDLSPDEQSTLIRKRLQVYSQKIYHKIHESETIE-REA 754

Query: 715  GICMRENSFYVDTVRSFRDRRYEYKGLNKVWKGKLSEAKASGN-SIKIQEAQDMVVLYDS 773
             IC REN FY+DTV+ FRDRRY+YKG  KVWKGK    KA+G    +I+  + M+VL+DS
Sbjct: 755  IICQRENPFYIDTVKDFRDRRYDYKGKQKVWKGKTEALKAAGAPQAEIESGKKMIVLFDS 814

Query: 774  LQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDG 833
            LQLAHK ILNSFYGYVMRKG+RWYSMEMAGV   TGA IIQ AR L+E+IG+PLELDTDG
Sbjct: 815  LQLAHKVILNSFYGYVMRKGSRWYSMEMAGVTCLTGAHIIQMARQLVERIGRPLELDTDG 874

Query: 834  IWCVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETH 893
            IWC+LP +FPEN+ F  K+  KKL ISYPCVMLN  V    TN QYQTLVDP +  YETH
Sbjct: 875  IWCMLPATFPENYGFTLKN-GKKLAISYPCVMLNHLVHGKFTNHQYQTLVDPKTFKYETH 933

Query: 894  SECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKV 953
            S+ SI FEVDGPY+AMILP SKEE   +KKRYAVFNDDG+LAELKGFE+KRRGELKLIK+
Sbjct: 934  SDNSIFFEVDGPYRAMILPTSKEEDKNLKKRYAVFNDDGSLAELKGFEVKRRGELKLIKI 993

Query: 954  FQAELFDKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLA 1013
            FQ ++F  FL G+T+ E Y+AVA VAN+WLD+L ++G+ +AD ELID I E+ +MSK+L 
Sbjct: 994  FQQQIFKFFLEGTTLTETYAAVAKVANQWLDVLHSKGETLADEELIDLICENRSMSKTLE 1053

Query: 1014 DYGEQKSCAVTTARRLSDFLGDTMVKDKGLRCQYIVACEPQGTPVSERAVPVAIFETDAE 1073
            +YG QKS ++TTA+RL+DFLG+ MVKDKGL C+YI+  +P+  PV+ERA+PVAIF  + +
Sbjct: 1054 EYGTQKSTSITTAKRLADFLGEQMVKDKGLNCKYIICSKPKNAPVTERAIPVAIFSAETK 1113

Query: 1074 IMKFYLRKWCKT-SSDVGIRSIVDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPD 1132
            + +F+LRKW K   +++  R+++DW YY +RL S IQK+ITIPAA+QKV NPVPRV HP+
Sbjct: 1114 VKRFFLRKWLKEDPANMDPRALLDWGYYLERLGSVIQKLITIPAALQKVRNPVPRVPHPE 1173

Query: 1133 WLYKKVREKEDKFRQRKLVDIFSSLKKDDFLNKTCNAETNLMDENVEDLEDFPKKRRNSV 1192
            WL +++  KEDK +Q+K+ D F S   ++         TNLMD    D+EDF       V
Sbjct: 1174 WLQRRINVKEDKLKQKKVTDSFKSAPLEEI--------TNLMDPRAGDIEDF------GV 1219

Query: 1193 NGPRPIVRCFEVNNEQKTVKTTDQVDSLRQQLEPSEVSDQQPSSQNAIDTENIDRIVDYK 1252
               +P  +       Q T K+       R+  EP       P +  A+     D   DY 
Sbjct: 1220 KLLKP--KALGAQMSQATQKSQK-----RKSPEPDRPISINPYA--ALPETMPDPTQDYV 1270

Query: 1253 GWLELKKRKWKDNLDRRKKQK--LGSLRASHQANGVSESLGDMINHKEAQRRTGVGSYFR 1310
            G+L+ +K+KWK     R +++   G  R +    GV+                     F+
Sbjct: 1271 GFLQYQKQKWKIQKQERIRRRHLFGESRVTQNNIGVT---------------------FQ 1309

Query: 1311 RQETAMTRCHWQIIQLVPSSQSGVFLAWVVVEGIMVRIPITVPRLFYLNSK-----DPIV 1365
             Q     +  WQ++QL  ++  GV LA+V+++  +  + + VPR  +LN K     D  V
Sbjct: 1310 NQAEITYKSTWQVLQLRGTTSPGVVLAFVLIDSKIHTLRVNVPRQIFLNLKGKELPDIEV 1369

Query: 1366 EKFPGRRVNKTLPHGRRSFNLIEVMIDEDQFRKESKKLAALLADPEVE 1413
            +    ++V  TLP+G  S +L ++ + E  +  +++KL+ L   P VE
Sbjct: 1370 DGCEAQKVTHTLPNGHPSVHLFKLTMPETVYINDAQKLSLLFNHPSVE 1417



 Score =  234 bits (596), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 160/636 (25%), Positives = 295/636 (46%), Gaps = 81/636 (12%)

Query: 1407 LADPEVEVLGWQQNAAKIGMQRCAASSQWFNERISLARYAHI------------------ 1448
            ++D  +  L WQ   AK  +    +   W      LARY  +                  
Sbjct: 1613 ISDSNLPPLQWQAFIAKRLVNHYLSLGSWILHLTELARYGDVPLCNLERDDPRFLIDIAY 1672

Query: 1449 ----------LWISDDGVPDLGGTSEEDECFADE-VHQPVLTYPGAYRKVSVELKIHHLS 1497
                      LW S    PD  G  ++D     E V  P +  PG Y  V +E+ + +L+
Sbjct: 1673 ARRLQKNNVVLWWSGGPRPDHAGYEQDDVLGPLETVQMPSVNNPGTYPSVCIEIDVRNLA 1732

Query: 1498 VNALLKSNQVNEMEGGGLFGFD--QDMNSGPYNNELCGFDETTSSAPAFRVVKQLIQRCL 1555
            +N +L S+ +NE+EG     F+     +  P +     + +   +     V++++++   
Sbjct: 1733 INTILTSSLINELEGSDSISFNPAAPQDDSPSDGTNVLYSDNAFATAGVTVLREMVKAWW 1792

Query: 1556 TDAVTSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEFRKLGATI 1615
            T+A   G+  AD ++QHL RW+ +P S L+D  L   +  + +K F  L+ +FR++G+ +
Sbjct: 1793 TEAC-KGSSMADVMVQHLVRWVENPDSFLYDRSLRYYVQMMSRKAFQQLMTDFRRVGSHV 1851

Query: 1616 IFANFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLFMDQYNYG 1675
            +FAN +++++ T K ++  A AY   +LK+++ + LF +++LE   +W  L++ D++NYG
Sbjct: 1852 VFANANRLLLQTTKSEVGNAYAYSQYILKSIKAKPLFHFLDLEIKEYWDYLIWYDEFNYG 1911

Query: 1676 GIPARADESLDDDSQ-VDIVSSWNIAEYLPKEIQDHFVLVVSEFMYIPWKHAQKL-AASR 1733
            G      E ++ + Q +D +  W ++ +LP  +Q  F   V EF+       QK+ A  R
Sbjct: 1912 G--KACTEVVEAEKQTLDCIMHWQLSRFLPVPMQPIFNDWVVEFV-------QKMHALKR 1962

Query: 1734 ASLQEGSSCTPSIT---------------VAAAENFESHIVQYVKGEISSYFTGKLLSIV 1778
             +L  G   TP  T               +   ++FE  + + + G         L+   
Sbjct: 1963 PALINGVESTPRPTQLPVRALGEDAAEDKIILGKDFEKPLKRQIAG---------LIRRQ 2013

Query: 1779 RDAIHHMKKMNNDQHNSPGVMQTAANIHKVDAPLEFIKHVCAAFALDQNVQHDVLVMRKN 1838
            +D + H +  ++  ++ P  +   +++   +  L+ +K +    +LD+N+  +  ++RK+
Sbjct: 2014 KDEMLHPELASD--YSFP--VLPGSHLQLSNPALQLVKSLMQVLSLDKNITMEARLLRKD 2069

Query: 1839 LLKYVRVREFAPEAEFRDPCPSFILPNVICSYCNDCRDLDLCRDMALL--------AQDW 1890
            LL    +REF+ EA F +P  S  LP +IC  C   RD+D CRD  LL        A  W
Sbjct: 2070 LLALFDIREFSTEARFVNPSSSLRLPQLICENCTMARDVDFCRDDDLLPLAPGEASAPPW 2129

Query: 1891 HCAMPQCGQPYDREVMENALLQIVRQRERLYHLQDLVCIRCNQVKAAHLAEQCACAGSFR 1950
             C    C   ++R  +E  L+ +V+     +  QDL C +C  V+     E CAC+G + 
Sbjct: 2130 RCTF--CAAEFNRLEIEERLIGMVQAVLSEWTGQDLKCGKCRAVRVNDFMEHCACSGVWT 2187

Query: 1951 CKEDASDFRSKMQIFLNIANRQGFQLLQECTSWILE 1986
                  +   ++++F  +A   G ++L      +L+
Sbjct: 2188 ETVRREEVVGRLRVFRGVAEGFGLRMLGVVVKEVLD 2223


>gi|302690758|ref|XP_003035058.1| hypothetical protein SCHCODRAFT_74334 [Schizophyllum commune H4-8]
 gi|300108754|gb|EFJ00156.1| hypothetical protein SCHCODRAFT_74334 [Schizophyllum commune H4-8]
          Length = 2163

 Score = 1340 bits (3469), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 690/1431 (48%), Positives = 919/1431 (64%), Gaps = 127/1431 (8%)

Query: 25   EELEAKLGYDLFSEGDKRLGWLLTFASSSLEDEDTRKVYSCIDLYFVSQDGSTFKSKYKF 84
            +E++ +LG+    EG++R GWL+    ++L+D +     + +D YF+  DG  FK+ + +
Sbjct: 12   DEVDERLGFIRIEEGNRREGWLINMHPTTLKDPEWPSGKAAVDYYFIQDDGGMFKATHVY 71

Query: 85   RPYFYAATKEKMEMDVEAYLRRRYESQIADIEILEKEDLDLKNHLSGLHKSYLKISFDTV 144
             PYFY A K   E  VE +L ++YE  I  I    KEDL L NHL G  + Y+++ F  V
Sbjct: 72   EPYFYIACKAGTETTVEEWLNKKYEGIICRIVRHRKEDLKLPNHLMGHQRLYIQLCFRNV 131

Query: 145  QQLMDVKKDLLHVVERNQAKFDAAEAYESILTGK--------------------REQRPQ 184
              L+ V++D++ +   N AK DA +AY  +++                      R++ PQ
Sbjct: 132  TDLLTVRRDIMPIALANGAKRDAVDAYAEVVSATAGASMDIELDNELDGVSSRYRDRDPQ 191

Query: 185  DFLDCIVDLREYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLLEKRVDLLQRAEVHVCAF 244
            D    I+D+REYDVPY++R AID D+R G WY V+  +  P      + ++RA+  V A+
Sbjct: 192  D---SIIDIREYDVPYYLRVAIDIDIRVGLWYGVTFEAGQPHFTHLAERVKRADPVVMAY 248

Query: 245  DIETTKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKV 304
            DIETTK PLKFPD   D +MMISYM+DGQGYLI NRE V EDI D EYTPK  +EG F V
Sbjct: 249  DIETTKAPLKFPDQALDQVMMISYMVDGQGYLITNREIVSEDIGDFEYTPKEGYEGPFIV 308

Query: 305  TNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDKN 364
             N  +E   +  +F H+QE+KP +  T+NGD+FD+PFL+ RA  +G  M  E+GF  D N
Sbjct: 309  FNEADEAATISRFFQHIQEIKPTVMATFNGDFFDFPFLDARAKANGIDMFLEIGFTKD-N 367

Query: 365  QGECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQ 424
            + E +++   H+DCF WVKRDSYLPQGSQGLKAVT AKLGY+P+E++PE M  +A+E+PQ
Sbjct: 368  EDEYKSRCCVHMDCFRWVKRDSYLPQGSQGLKAVTTAKLGYNPIELDPELMTPYAQEQPQ 427

Query: 425  MMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKAN 484
            ++A YSVSDAVATYYLYM YVHPFIFSL  IIP+ PDEVLRKG+GTLCE LLMV+AY+ +
Sbjct: 428  VLAQYSVSDAVATYYLYMKYVHPFIFSLCNIIPLCPDEVLRKGTGTLCETLLMVEAYRGH 487

Query: 485  VICPNKHQSDPEKFYRNHLLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQLLNNL 544
            +I PN+H+      Y  HLL SETY+GGHVE LE+GVFRSD+PT FK+DP+A ++L++ L
Sbjct: 488  IIMPNRHEEAHGNMYEGHLLASETYVGGHVEALEAGVFRSDIPTDFKIDPTAIQELIDQL 547

Query: 545  DRDLQYAIKVEGKMDLESVSNYDEVKNAIMEKLLRLQEEPIREECPLIYHLDVAAMYPNI 604
            D  L + I  E K  L+ V+NY+EVK  I   L  ++++P R + PLIYHLDVAAMYPNI
Sbjct: 548  DAALTFCIVEESKCSLDKVTNYEEVKGEIQRMLEVMRDDPKRTDKPLIYHLDVAAMYPNI 607

Query: 605  ILTNRLQPPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYYHLKKQIESE- 663
            +L+NRLQP S+V + VC  CD+NRPGKTC R+LEW WRGE F   R +Y  ++  +  E 
Sbjct: 608  MLSNRLQPDSMVDESVCAVCDYNRPGKTCDRRLEWAWRGEFFPAHRDEYNMIRHALNQEH 667

Query: 664  FVDGTNGHLSKSFLDLPKMEQQSRLKDRLKKYCQKAYKRVLDKPVTELREAGICMRENSF 723
            F     G+  + F+DL   EQ + L  RL  Y +K YK+V D  V E R + +C REN F
Sbjct: 668  FPPKRPGNPERRFVDLSPAEQTALLHKRLGDYSRKVYKKVKDTKV-ETRTSIVCQRENPF 726

Query: 724  YVDTVRSFRDRRYEYKGLNKVWKGKLSEAKASGNSI-KIQEAQDMVVLYDSLQLAHKCIL 782
            YVDTVR FRDRRYEYKGL+K WK  L +  + G S+ ++ EA+ M+VLYDSLQLAHKCIL
Sbjct: 727  YVDTVRRFRDRRYEYKGLHKTWKKNLDQVTSEGRSMAEVDEAKKMIVLYDSLQLAHKCIL 786

Query: 783  NSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLPGSF 842
            NSFYGYVMRKGARW+SMEMAG+   TGAKIIQ AR L+E+IG+PLELDTDGIWC+LPG F
Sbjct: 787  NSFYGYVMRKGARWHSMEMAGITCLTGAKIIQMARALVERIGRPLELDTDGIWCMLPGVF 846

Query: 843  PENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEFEV 902
            PENF FK  D  K +  SYPC MLN  V    TN QY  L DP +  Y+  SE SI FE+
Sbjct: 847  PENFKFKL-DNGKNIGFSYPCTMLNHLVHDQYTNHQYHDL-DPETGEYKIQSENSIFFEL 904

Query: 903  DGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKF 962
            DGPYKAMILPASKEE  L+KKRYAVFNDDG+LAELKGFE+KRRGEL+LIK+FQ+++F+KF
Sbjct: 905  DGPYKAMILPASKEEDKLLKKRYAVFNDDGSLAELKGFEVKRRGELQLIKIFQSQIFEKF 964

Query: 963  LHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLADYGEQKSCA 1022
            L G+T +ECY+AVA VA++WLD+L +    + D EL++ I+E+ +MSK+LA+Y  QKS +
Sbjct: 965  LLGTTTQECYAAVAEVADQWLDVLFSHADSLPDEELVELIAENRSMSKTLAEYAGQKSTS 1024

Query: 1023 VTTARRLSDFLGDTMVKDKGLRCQYIVACEPQGTPVSERAVPVAIFETDAEIMKFYLRKW 1082
            ++TARRL++FLGD MVKDKGL C++I++  P G PV+ERAVP+AIF  + ++ + YLRKW
Sbjct: 1025 ISTARRLAEFLGDQMVKDKGLACKFIISQRPIGAPVTERAVPIAIFSAEEDVKRTYLRKW 1084

Query: 1083 CKTSSDVG--IRSIVDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLYKKVRE 1140
             K +S V   +RSI+DW YY +RL S IQK+ITIPA MQK+ NPVPR+ HPDWL+++V  
Sbjct: 1085 LKDNSLVNFDLRSILDWDYYIERLGSVIQKLITIPAGMQKIPNPVPRIRHPDWLHRRVAN 1144

Query: 1141 KEDKFRQRKLVDIFSSLKKDDFLNKTCNAETNLMDENVEDLED------FPKKRRNSVNG 1194
              DKF+Q K+ D F                     +   D+ED      +P ++R ++  
Sbjct: 1145 AVDKFKQNKVTDFF---------------------KGTADMEDMGQSALYPGRKRIAL-- 1181

Query: 1195 PRPIVRCFEVNNEQKTVKTTDQVDSLRQQLEPSEVSDQQPSSQNAIDTENI-DRIVDYKG 1253
                            VK        + Q EP+      P  Q  + T  + D   DY  
Sbjct: 1182 ----------------VKR-------KLQREPT------PEPQEDLSTAVLPDPHEDYSA 1212

Query: 1254 WLELKKRKWKDNLDRRKKQKLGSLRASHQANGVSESLGDMINHKEAQRRTGVGSYFRRQE 1313
            WL   + +WK                  +  GV++                V S FR  +
Sbjct: 1213 WLRAMRPRWK-----------------MRREGVAD--------------VNVPSMFRNAK 1241

Query: 1314 TAMTRCHWQIIQLVPSSQSGVFLAWVVVEGIMVRIPITVPRLFYLNSKDPIVEKFPG--- 1370
            T   R  W I+Q+ P+   G ++ W+ VE  +V + + VPR FY+N + P    F     
Sbjct: 1242 TRADR-RWDIVQIRPTDVPGRYMLWLSVEADLVSVAVRVPRQFYINLRTPRETIFDNDLY 1300

Query: 1371 --RRVNKTLPHGRRSFNLIEVMIDEDQFRKESKKLAALLADPEVEVLGWQQ 1419
               +V +TLP G  + NL  +++ ED FR   +    L+ DP V+ +  QQ
Sbjct: 1301 QWEKVTRTLPRGLPATNLYRIIVREDVFRGNQEHFIDLMNDPNVDGVFEQQ 1351



 Score =  290 bits (742), Expect = 6e-75,   Method: Compositional matrix adjust.
 Identities = 204/629 (32%), Positives = 320/629 (50%), Gaps = 68/629 (10%)

Query: 1412 VEVLGWQQNAAKIGMQRCAASSQWFNERISLARY-----AH------------------- 1447
            ++V  WQ + A     R  A   W +  I+ A+Y      H                   
Sbjct: 1545 LDVFPWQLHVAHKMNARYLAMGPWLDRLIATAQYFDVPIGHLDGDQPLVVSDISFARRLV 1604

Query: 1448 ----ILWISDDGVPDLGGTSEEDECFADEVHQPVLTYPGAYRKVSVELKIHHLSVNALLK 1503
                +LW S    PDLGG  E D    D+  +     PGAY  V +E+ I +L+VN++L 
Sbjct: 1605 QQDMVLWWSPGENPDLGGI-ECDRRPTDDFPRTEFMSPGAYPNVCLEITIRNLAVNSVLH 1663

Query: 1504 SNQVNEMEG-GGLFGFDQ-----DMNSGPYNNELCGFDETTSSAPAFRVVKQLIQRCLTD 1557
            S  VNE+EG GG   FD      D      N     F E+  S   F +++ +++  L D
Sbjct: 1664 SVLVNELEGSGGATAFDAVSHTIDEYRKGENQRDVTFGESNVSPHMFSILRNMLKGWLLD 1723

Query: 1558 AV---TSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEFRKLGAT 1614
             +   T+G   A   + H +RW+ S ++ ++DP LHR +H +M+K F  +LAEFR+LG+ 
Sbjct: 1724 RIVDETAGGP-ASMGIDHFWRWISSSNATMYDPSLHRFVHGLMRKTFIQMLAEFRRLGSQ 1782

Query: 1615 IIFANFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLFMDQYNY 1674
            I+ A+F +V++ T K     A AY   L  A+ + ELFE ++L    F+  LLFMD  N 
Sbjct: 1783 IVCADFGRVLLATSK-PPGTAYAYATYLTSAVTSHELFEHVKLTTDRFYDFLLFMDPANV 1841

Query: 1675 GGIPARADESLDDDSQVDIVSSWNIAEYLPKEIQDHFVLVVSEFMYIPWKHAQKL-AASR 1733
            GG+      +++  +++ +   WNIA++LPK I+  F  VV  F+   +K  QK+ AA+R
Sbjct: 1842 GGVVCEDPLAVEPPTELALEMRWNIAQFLPKAIRPDFEAVVQYFIVELFKARQKVNAATR 1901

Query: 1734 ASLQEGSSCTPSITVA-AAENFESHIVQYVKGEISSYFTGKLLSIV---RDAIHHMKKMN 1789
              L+  ++  P  T    A+  E+ ++Q     IS   T K+L  V   +D     +  +
Sbjct: 1902 VPLRPLANGAPESTPRDVAKVQEADLIQEF---ISRKLTRKMLRAVDSVQDRYRAAQLGD 1958

Query: 1790 NDQHNS------PGVMQTAANIHKVDAPLEFIKHVCAAFALDQNVQHDVLVMRKNLLKYV 1843
            +D+ +       PG   T  +      PLEF+K  CA F L ++   +V ++++ LL+ +
Sbjct: 1959 SDEADDFRFPVLPGSHLTLES-----PPLEFVKFACAVFTLAKDYTVEVGLLKRLLLELI 2013

Query: 1844 RVREFAPEAEFRDPCPSFILPNVICSYCNDCRDLDLCRDMALL--AQD-----WHCAMPQ 1896
             VREFA EA FR+PC   +L  V C +C+  RD DLCRD  LL  AQ      W CA   
Sbjct: 2014 GVREFASEAAFRNPCEPLVLHGVPCRHCDALRDFDLCRDPDLLPGAQGGATPRWACAT-- 2071

Query: 1897 CGQPYDREVMENALLQIVRQRERLYHLQDLVCIRCNQVKAAHLAEQCACAGSFRCKEDAS 1956
            CG  YDR  +E  L+ +V+  ER +  QDL C RC QV++ +++  C C+G+++   + +
Sbjct: 2072 CGGEYDRLAIEFRLVGMVQGMERAFAQQDLRCSRCQQVQSDNVSRTCHCSGAYQHTMNKA 2131

Query: 1957 DFRSKMQIFLNIANRQGFQLLQECTSWIL 1985
            D R +++  +N+A       L+EC  ++L
Sbjct: 2132 DIRRRLRTAVNVAIVHNLPRLKECAQYLL 2160


>gi|380029725|ref|XP_003698516.1| PREDICTED: LOW QUALITY PROTEIN: DNA polymerase epsilon catalytic
            subunit A-like [Apis florea]
          Length = 2266

 Score = 1340 bits (3468), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 688/1418 (48%), Positives = 947/1418 (66%), Gaps = 79/1418 (5%)

Query: 32   GYDLFSEGDKRLGWLLTFASSSLEDEDTRKVYSCIDLYFVSQDGSTFKSKYKFRPYFYAA 91
            G+   ++  +R+G+L+   ++ +  ED +++ S +D YF+ +D + FK  Y + PYFY  
Sbjct: 50   GFHRVNDVKERVGYLINMHATEI-IEDDKRLMSGVDYYFLEEDCTRFKICYPYNPYFYIL 108

Query: 92   TKEKMEMDVEAYLRRRYESQIADIEILEKEDLDLKNHLSGLHKSYLKISFDTVQQLMDVK 151
             K+    +V   L ++Y   I  IE + KEDLDL NHL GL + YLK+SF     L  ++
Sbjct: 109  CKKDTYEEVSTGLNKKYTELIQKIETIYKEDLDLPNHLIGLKQKYLKLSFLNTVDLNKIR 168

Query: 152  KDLLHVVERNQAKFDAAEAYESILT---------GKREQRPQDFLDCIVDLREYDVPYHI 202
            +D++  V+ N+ +      Y ++L          G  + +  DF D I+D+REYDVP+HI
Sbjct: 169  RDIMKAVKLNKEREKNNTYYTNMLATVLNSDQDRGNHKMQTIDFTDNILDIREYDVPHHI 228

Query: 203  RFAIDNDVRCGQWYDVSISSTG-PLLEKRVDLLQRAEVHVCAFDIETTKLPLKFPDADYD 261
            R +ID  + CG WY +       PL+ K+ D++   +  V A+DIETTKLPLKFPDAD D
Sbjct: 229  RVSIDMKICCGSWYTIKTRGNDVPLITKKDDIIVPPDPIVLAYDIETTKLPLKFPDADTD 288

Query: 262  IIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNVNNEIELLRLWFAHM 321
             IMMISYM+DGQGYLI NRE +  DIED EYTPKPEFEG+F V N  NE   ++ +F H+
Sbjct: 289  QIMMISYMIDGQGYLITNREIISCDIEDFEYTPKPEFEGFFTVFNEPNEKATIKKFFDHI 348

Query: 322  QEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDKNQGECRAKFACHLDCFAW 381
             +++P I+VTYNGD+FDWPF+ETRAA H   M  ++GF  +++ G   ++ A H+DC++W
Sbjct: 349  NDIRPHIFVTYNGDFFDWPFVETRAAFHNIDMKNKIGFSKNRD-GVYNSRPAMHMDCYSW 407

Query: 382  VKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQMMASYSVSDAVATYYLY 441
            V+RDSYLP GSQ LKAV KAKL YDP+E++PEDM R A E+P+ +A+YSVSDAVATYYLY
Sbjct: 408  VRRDSYLPVGSQNLKAVAKAKLRYDPVELDPEDMCRLASEEPETLANYSVSDAVATYYLY 467

Query: 442  MTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVICPNKHQSDPEKFYRN 501
              Y+HPFIF+L TIIPM PDEVLRKGSGTLCE LLMVQA++AN+I PNK + +  K  ++
Sbjct: 468  QKYIHPFIFALCTIIPMEPDEVLRKGSGTLCESLLMVQAFQANIIFPNKQEQELNKLTKD 527

Query: 502  -HLLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQLLNNLDRDLQYAIKVEGKMDL 560
             HLL+ ETY+GGHVE LESGVFR+D+P  FK+ PSA ++L++ +   L++AI+ E K+ +
Sbjct: 528  GHLLDQETYVGGHVEALESGVFRADIPCRFKIVPSAVDELISGVGHALKHAIQEEEKIPM 587

Query: 561  ESVSNYDEVKNAIMEKLLRLQEEPIREECPLIYHLDVAAMYPNIILTNRLQPPSIVTDEV 620
            + V+N++EV   I  KL  L+ +P+R E P+IYHLDV AMYPNIILTNRLQP ++V + V
Sbjct: 588  DMVTNFEEVVEEITVKLKGLRNQPLRLENPVIYHLDVGAMYPNIILTNRLQPSAMVDETV 647

Query: 621  CTACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYYHLKKQIESE-----FVDGTNGHLSKS 675
            C ACD+N+PG  C R ++W+WRGE F    S+Y  +++Q+E+E     F DG      ++
Sbjct: 648  CAACDYNKPGALCQRNMKWMWRGEYFAASLSEYQRMQQQLENEKFPPQFPDGPR----RA 703

Query: 676  FLDLPKMEQQSRLKDRLKKYCQKAYKRVLDKPVTELREAG--ICMRENSFYVDTVRSFRD 733
            + +L K EQ S  K RL +YC+KAYK+V    +T + E    +C +ENSFYVDTVR+FRD
Sbjct: 704  YHELSKEEQASYEKKRLTEYCKKAYKKV---KITNMEEKTQTVCQKENSFYVDTVRAFRD 760

Query: 734  RRYEYKGLNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHKCILNSFYGYVMRKG 793
            RRYEYK L KV K +++ A A G++  I+ A++  VLYDSLQLAHKCILNSFYGYVMRKG
Sbjct: 761  RRYEYKALTKVAKQEVAVALAKGDAADIKSAKNREVLYDSLQLAHKCILNSFYGYVMRKG 820

Query: 794  ARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLPGSFPENFTFKTKDL 853
            +RW+SMEM G+V YTGA II  AR +IE++G+PLELDTDGIWCVLP SFP+N    T   
Sbjct: 821  SRWFSMEMGGIVCYTGAHIIMRAREIIEQVGRPLELDTDGIWCVLPASFPDNVIVHTTHP 880

Query: 854  KK-KLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEFEVDGPYKAMILP 912
            KK +L ISYP  +LN  V    TND Y  LVD  + TY+   E SI FEVDGPY AM+LP
Sbjct: 881  KKXELAISYPNAVLNFMVKDQFTNDVYHELVDSENFTYKVRHENSIFFEVDGPYLAMVLP 940

Query: 913  ASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFLHGSTIEECY 972
            A+KEEG  +KKRYAVFN DG+LAELKGFE+KRRGEL+LIKVFQ  +F+ FL G+T+EECY
Sbjct: 941  AAKEEGKKLKKRYAVFNFDGSLAELKGFEVKRRGELQLIKVFQTSVFESFLKGNTLEECY 1000

Query: 973  SAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLADYGEQKSCAVTTARRLSDF 1032
            ++VA  A+ WLD+L ++  D+ DSEL + ISE+ +MS+ L DYG QKS +++TA+RL++F
Sbjct: 1001 ASVAKDADYWLDILYSKCADMPDSELFELISENKSMSRKLEDYGGQKSTSISTAKRLAEF 1060

Query: 1033 LGDTMVKDKGLRCQYIVACEPQGTPVSERAVPVAIFETDAEIMKFYLRKWCKTSS--DVG 1090
            LGD MVKD GL C+YI+A +PQG PV+ERA+P+AIF+++  I K+YLRKW K  S     
Sbjct: 1061 LGDQMVKDAGLACKYIIANKPQGAPVTERAIPLAIFQSEPAIRKYYLRKWLKDPSLQSDD 1120

Query: 1091 IRSIVDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLYKKVREKEDKFRQRKL 1150
            IR+I+DWSYY +RL SAIQKIITIPAAMQ +SNPVPRV HPDWL+K+V EK    +QRK+
Sbjct: 1121 IRNILDWSYYIERLGSAIQKIITIPAAMQGLSNPVPRVKHPDWLHKRVMEKSATHKQRKI 1180

Query: 1151 VDIFSSLKKDDFLNKTCNAETNLMDENVEDLEDFPKKRRNSVNGPRPIVR-CFEVNNEQK 1209
             D+FS + KD    K  + + +L   +  D+ED        + G  PI +    + N++K
Sbjct: 1181 TDVFSVIHKD----KEKDNDHDLEPSDTCDIED--------IAGKAPIFKQPIPIANKRK 1228

Query: 1210 TVKTTDQVDSLRQQLEPSEVSD---------QQPSSQNAIDTENIDRIVDYKGWLELKKR 1260
                       RQ  E +E+ +           P S      E ++       WL+  K+
Sbjct: 1229 -----------RQNSEENELENINKNWKDVLGSPPSMGTTKEERLE-------WLKFHKQ 1270

Query: 1261 KWKDNLDRRKKQKLGSLRASHQANGVSESLGDMINHKEAQRRTGVGSYFRRQETAMTRCH 1320
            KW     +R + +          NG   S G   N       + +G + RR +  +    
Sbjct: 1271 KWAYQAKQRAEYQKSKKSKRSNDNGDRISWGVTRN----TNTSTLGGFLRRAQRKLFMTP 1326

Query: 1321 WQIIQLVPSSQSGVFLAWVVVEGIMVRIPITVPRLFYLNSKDPIVEKFPGRRVN-----K 1375
            WQIIQ+  +++ G++  W+++E    ++ + VPR+FY+N++ P  +  PG++V+     K
Sbjct: 1327 WQIIQISQTNEPGLYRLWILIEKDFHQLRLVVPRIFYVNTRKPKPDPEPGKKVSWKKSMK 1386

Query: 1376 TLPHGRRSFNLIEVMIDEDQFRKESKKLAALLADPEVE 1413
             LP  R  +NL +  + E Q++K S++L   L+ PE+E
Sbjct: 1387 ILPRSRPVYNLYQYSVPEIQYQKHSQELLEDLSKPEIE 1424



 Score =  290 bits (742), Expect = 6e-75,   Method: Compositional matrix adjust.
 Identities = 171/576 (29%), Positives = 292/576 (50%), Gaps = 40/576 (6%)

Query: 1442 LARYAHILWISDDGVPDLGGTSEEDECFA---DEVHQPVLTYPGAYRKVSVELKIHHLSV 1498
            L +   +LW S    PDLGG+  +D       +E  Q      G Y  V +EL+I +L+V
Sbjct: 1682 LQKNNFVLWCSSTEKPDLGGSEHDDNRLLTDFEESSQCAANNFGTYSSVCIELEIENLAV 1741

Query: 1499 NALLKSNQVNEMEGGGLF-GFD-------QDMNSG-PYNNELCGFDETTSSAPAFRVVKQ 1549
            N LL+ + +++++G   F  F        QDM  G    N +  +DE    +PAFR ++ 
Sbjct: 1742 NTLLQYHHIHDIDGTSNFVAFHNQQQTSVQDMAMGDSMMNTIPSYDEIVLCSPAFRSLRS 1801

Query: 1550 LIQRCLTDAVTSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEFR 1609
            ++   L D     NVFAD  + H YRWL SP++ L+DP L R LH  M+K+F  LLAEF+
Sbjct: 1802 MVNAWLLDVSVYKNVFADYQIIHFYRWLRSPNALLYDPALRRTLHTYMKKLFIQLLAEFK 1861

Query: 1610 KLGATIIFANFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLFM 1669
             LG+ I+FANF+K+I+ T K  ++ A  Y + +++ ++ +E+F  IE+     W  L ++
Sbjct: 1862 TLGSIIVFANFNKIIVCTKKRAVNDALGYIEFVVQTIRNKEIFHSIEITFEQCWEYLKWL 1921

Query: 1670 DQYNYGGIPARADESLDDD--------------------SQVDIVSSWNIAEYLPKE--I 1707
            D +NY GI  +  +++ ++                       +IV +WN+ E LPKE   
Sbjct: 1922 DVHNYAGIKGKLTQNMQENIANKNMNDENSDNENEDEDEDTPEIVMNWNLMECLPKEAAC 1981

Query: 1708 QDHFVLVVSEFMYIPWKHAQKLAASRASLQEGSSCTPSITVAAAENFESHIVQYVKGEIS 1767
            Q  F  +++ ++   ++   +   +        S + S+          +   + K  IS
Sbjct: 1982 QSSFSAIIAGYINAIYQFISENELNTTIKPRRKSNSQSLAAQLGLGSLENTANFAKKLIS 2041

Query: 1768 SYFTGKLLSIVRDAIHHMKKMNNDQHNSPGVMQTAANIHKVDAPLEFIKHVCAAFALDQN 1827
               + KL  IV+     + ++       P +     +  +++  LE +K VC   +LD+ 
Sbjct: 2042 GDMSQKLFQIVQKIYKKLPEITLTIQEYPNLDLDGKDSKRINPALELVKSVCKVLSLDKE 2101

Query: 1828 VQHDVLVMRKNLLKYVRVREFAPEAEFRDPCPSFILPNVICSYCNDCRDLDLCRD-MALL 1886
            V+++V  ++ NLL+ +R+  F+   E++DPC S ILP +IC  CN  RD+DLC+D   ++
Sbjct: 2102 VENEVYHLQTNLLRLIRIGSFSDAVEWKDPCISLILPEIICKACNHTRDIDLCKDNFCIM 2161

Query: 1887 AQD---WHCAMPQCGQPYDREVMENALLQIVRQRERLYHLQDLVCIRCNQVKAAHLAEQC 1943
             Q+   W C  P C   YD E +E  L+ ++ ++   Y LQDL C +C ++K  ++ E C
Sbjct: 2162 EQNRYIWKC--PLCKTSYDNEEIEFLLIDLLNRKSMGYILQDLQCCKCKEIKRENMNELC 2219

Query: 1944 ACAGSFRCKEDASDFRSKMQIFLNIANRQGFQLLQE 1979
            +C+G F+      +    M+I  ++A +   + L E
Sbjct: 2220 SCSGDFKTLIPKDEIVKFMKICKSVARKCDMETLME 2255


>gi|403415076|emb|CCM01776.1| predicted protein [Fibroporia radiculosa]
          Length = 2227

 Score = 1339 bits (3466), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 694/1434 (48%), Positives = 935/1434 (65%), Gaps = 118/1434 (8%)

Query: 25   EELEAKLGYDLFSEGDKRLGWLLTFASSSLEDEDTRKVYSCIDLYFVSQDGSTFKSKYKF 84
            +E++ KLG+   SEG +R GWL+    + ++D D     + +D YF+  DG  FKS  ++
Sbjct: 66   DEVDEKLGFSRVSEGPRREGWLVNMHPTLVKDPDWPSGKAGVDFYFIQDDGGMFKSTLQY 125

Query: 85   RPYFYAATKEKMEMDVEAYLRRRYESQIADIEILEKEDLDLKNHLSGLHKSYLKISFDTV 144
             PYFY A K  ME  +E +L ++YE+ I  I    KEDL+L NHL G  + YL++ F  V
Sbjct: 126  EPYFYIACKSGMETIIEEWLLKKYEAHIYRITRERKEDLELPNHLLGHRRLYLQLHFRNV 185

Query: 145  QQLMDVKKDLLHVVERNQAKFDAAEAYESILT---------------------------- 176
              L+ V++D++ +   N AK DA +AY  ++                             
Sbjct: 186  SDLLAVRRDIMPLALANSAKLDAVDAYAEVVNSTASASLNIEMEGAWRAEAEAGPSTTWG 245

Query: 177  -GKREQRPQDFLDCIVDLREYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLLEKRVDLLQ 235
             G R++ P++    I+D+RE+DVPY++R A+DN++R G WY V+ ++  P  ++ V+ ++
Sbjct: 246  GGGRDKDPRE---GIIDIREFDVPYYLRVAMDNEIRVGLWYSVTFTAGQPAFKQLVERVK 302

Query: 236  RAEVHVCAFDIETTKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPK 295
            RA+  V A+DIETTK PLKFPD   D +MMISYM+DGQG+LI NR+ V EDIED EYTPK
Sbjct: 303  RADPVVMAYDIETTKAPLKFPDQAVDQVMMISYMVDGQGFLITNRDIVSEDIEDFEYTPK 362

Query: 296  PEFEGYFKVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSE 355
              +EG F + N  +E   +R +F+H+Q+VKP +  T+NGD+FD+PFL  RA  HG  M  
Sbjct: 363  EGYEGPFTIFNEPDESSTIRRFFSHVQDVKPTVMATFNGDFFDFPFLCARAKIHGIDMFI 422

Query: 356  ELGFQCDKNQGECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDM 415
            E+GF  D ++ E +++   H+DCF WVKRDSYLPQGSQGLKAVT AKLGYDP+E++PE M
Sbjct: 423  EMGFAKD-SEDEFKSRTCVHMDCFRWVKRDSYLPQGSQGLKAVTTAKLGYDPIELDPELM 481

Query: 416  VRFAKEKPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEML 475
              +A E+PQ +A YSVSDAVATYYLYM YVHPFIFSL  IIP++PDEVLRKGSGTLCE L
Sbjct: 482  TPYAMEQPQTLAQYSVSDAVATYYLYMKYVHPFIFSLCNIIPLNPDEVLRKGSGTLCETL 541

Query: 476  LMVQAYKANVICPNKHQSDPEKFYRNHLLESETYIGGHVECLESGVFRSDLPTSFKLDPS 535
            LMV+AY+  +I PN+H+ +    +  HLL SETY+GGHVE LE+GVFRSD+PT F+++PS
Sbjct: 542  LMVEAYRGEIIMPNRHEEEHGNMWEGHLLASETYVGGHVEALEAGVFRSDIPTHFRIEPS 601

Query: 536  AYEQLLNNLDRDLQYAIKVEGKMDLESVSNYDEVKNAIMEKLLRLQEEPIREECPLIYHL 595
            A ++L++ LD  L + I  E K  LESV+NY+EVK  I   L  +++ P R + PLIYHL
Sbjct: 602  AVQKLIDELDAALTFCIMEESKSSLESVTNYNEVKAQIQAALEEMRDNPQRMDKPLIYHL 661

Query: 596  DVAAMYPNIILTNRLQPPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYYH 655
            DVAAMYPNI+L+NRLQP S+V + VC  CD+NRPGKTC R++ W WRGE F  +R ++  
Sbjct: 662  DVAAMYPNIMLSNRLQPDSVVDESVCAVCDYNRPGKTCDRRMTWAWRGEFFPARRDEFNM 721

Query: 656  LKKQIESE-FVDGTNGHLSKSFLDLPKMEQQSRLKDRLKKYCQKAYKRVLDKPVTELREA 714
            +K  +  E F     G   + F+DL   EQ + L  RL  Y +K YK++ D  V E REA
Sbjct: 722  IKHALNQETFPPKRPGGSQRQFIDLTDAEQTALLHKRLGDYSRKVYKKIKDTKV-ENREA 780

Query: 715  GICMRENSFYVDTVRSFRDRRYEYKGLNKVWKGKLSEAKASGNSI-KIQEAQDMVVLYDS 773
             IC REN FY+DTVR FRDRRYEYKG +K WK  L    +   SI ++ EA+ M+VLYDS
Sbjct: 781  IICQRENPFYIDTVRRFRDRRYEYKGHHKTWKKNLDTVLSEQRSIAEVDEARKMIVLYDS 840

Query: 774  LQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDG 833
            LQLAHKCILNSFYGYVMRKGARW+SMEMAG+   TGA IIQ AR L+E+IG+PLELDTDG
Sbjct: 841  LQLAHKCILNSFYGYVMRKGARWHSMEMAGITCLTGATIIQMARQLVEQIGRPLELDTDG 900

Query: 834  IWCVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETH 893
            IWC+LPG FPENF FK  +  K +  SYPC MLN  V    TN QY  L D  +  Y  H
Sbjct: 901  IWCMLPGIFPENFRFKLTN-GKTIGFSYPCTMLNHLVHAQFTNHQYHDL-DLETGEYRIH 958

Query: 894  SECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKV 953
            SE SI FE+DGPYKAMILP+SKEE  L+KKRYAVFNDDG+LAELKGFE+KRRGEL+LIK+
Sbjct: 959  SENSIFFELDGPYKAMILPSSKEEDKLLKKRYAVFNDDGSLAELKGFEVKRRGELQLIKI 1018

Query: 954  FQAELFDKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLA 1013
            FQ+++F++FL G T EECY+AVA VA+RWLD+L ++ + + D ELI+ I+E+ +MSK+LA
Sbjct: 1019 FQSQIFERFLLGGTTEECYAAVAQVADRWLDVLFSKAESLGDDELIELIAENRSMSKTLA 1078

Query: 1014 DYGEQKSCAVTTARRLSDFLGDTMVKDKGLRCQYIVACEPQGTPVSERAVPVAIFETDAE 1073
            +Y  QKS +++TA+RL++FLGD MVKDKGL C++I++ +P G PV+ERAVPVAIF  +  
Sbjct: 1079 EYAGQKSTSISTAKRLAEFLGDQMVKDKGLACKFIISKQPAGAPVTERAVPVAIFSAEDS 1138

Query: 1074 IMKFYLRKWCKTS--SDVGIRSIVDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHP 1131
            + + YLRKW K +  ++  IRSI+DW YY +RL S IQK+ITIPAAMQKV+NPVPR+ HP
Sbjct: 1139 VKRTYLRKWLKNNGLTEFDIRSILDWEYYIERLGSVIQKLITIPAAMQKVANPVPRIKHP 1198

Query: 1132 DWLYKKVREKEDKFRQRKLVDIFSSLKKDDFLNKTCNAETNLMDENVEDLEDFPKKRRNS 1191
            DWL+++V   +DKF Q K+ D F        L      ET+       DLEDF    R+S
Sbjct: 1199 DWLHRRVVALDDKFHQHKVTDFFR-------LKVPGEQETH-------DLEDFGTPTRDS 1244

Query: 1192 VNGPRPIVRCFEVNNEQKTVKTTDQVDSLRQQLEPSEVSDQQPSSQNAIDTENIDRIVDY 1251
             + PR  +    VN +    + T          EP+E   +QPS Q A        + DY
Sbjct: 1245 -DRPRLAI----VNRKPAPRQDTP---------EPAE---EQPSYQLA--------VTDY 1279

Query: 1252 KGWLELKKRKWKDNLDRRKKQKLGSLRASHQANGVSESLGDMINHKEAQRRTGVGSYFRR 1311
            + +L++K+  W     RR +            NG ++++              + S F+ 
Sbjct: 1280 RRYLKIKRPIW-----RRCR------------NGETDAV--------------LPSMFKA 1308

Query: 1312 QETAMTRCHWQIIQLVPSSQSGVFLAWVVVEGIMVRIPITVPRLFYLNSKDPIVEK---- 1367
                 +R  W ++Q+ P+   G F  W+ V G +V +P+ +PR FYL+ + P        
Sbjct: 1309 TTNLNSR--WDVVQIRPARGPGHFTLWLAVGGNLVSLPLRIPREFYLHRRTPAKSDQFRK 1366

Query: 1368 --FPGRRVNKTLPHGRRSFNLIEVMIDEDQFRKESKKLAALLADPEVEVLGWQQ 1419
              +   +V + LP  R   NL ++ + ED + +  +    L +DP V+ +  QQ
Sbjct: 1367 DIYTWEKVVRGLPRDRPCVNLYKLSVREDVYIQAQEHFLDLTSDPSVDGVFEQQ 1420



 Score =  293 bits (751), Expect = 5e-76,   Method: Compositional matrix adjust.
 Identities = 190/625 (30%), Positives = 308/625 (49%), Gaps = 62/625 (9%)

Query: 1412 VEVLGWQQNAAKIGMQRCAASSQWFNERISLARY-----AHI------------------ 1448
            ++V  WQ   A+  + R      W +  ISLA Y      HI                  
Sbjct: 1613 LDVFPWQTGVAQKLVGRYLTMGTWLDRSISLANYYDVPLGHIDGDQPLLLSDIEFARKLA 1672

Query: 1449 -----LWISDDGVPDLGGTSEEDECFADEVHQPVLTYPGAYRKVSVELKIHHLSVNALLK 1503
                 LW S    PDLGG  E D   ++E+ +     PG Y  V +E+ + +L+VNA+L 
Sbjct: 1673 EHDIVLWWSPGDRPDLGGM-ENDARPSEELSKTEFCSPGCYSNVCLEITVRNLAVNAVLH 1731

Query: 1504 SNQVNEMEG-GGLFGFDQ----DMNSGPYNNELCGFDETTSSAPAFRVVKQLIQRCLTDA 1558
            S  VNE+EG GG   FD     D  +G  +     F + + S   F ++K +++  L D 
Sbjct: 1732 SVIVNELEGSGGATAFDSSHTLDEYAGGDSPRDLTFGDASVSPQTFSILKSMVKTWLLDK 1791

Query: 1559 VTSGNVFADA--ILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEFRKLGATII 1616
            +  GN  + A   + H +RW+ S  S ++DP LHR +H +M+K F  +LAEF++LG+ ++
Sbjct: 1792 I-QGNFESPASVAIDHFWRWISSNASHMYDPSLHRFVHGLMRKTFIQMLAEFKRLGSHVV 1850

Query: 1617 FANFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLFMDQYNYGG 1676
            +A+ SK+++ T K     A AY   +  A+ + ELF+ + L    F+  LLFMDQ N  G
Sbjct: 1851 YADLSKILLVTSK-PPGTAHAYATYITTAVTSHELFQHVYLYTARFYDFLLFMDQANIAG 1909

Query: 1677 IPARADESLDDDSQVDIVSSWNIAEYLPKEIQDHFVLVVSEFMYIPWKHAQKLAAS-RAS 1735
            +      +++    + +   WNI  +LP  IQ  F  V+  F+   ++  QK + + RA 
Sbjct: 1910 VVCEDPLAVNPPEALSVEMRWNIETFLPPAIQRDFKNVIRFFLVEFYRTCQKSSGTARAP 1969

Query: 1736 LQEGSSCTPSIT---VAAAENFESHIVQYVKGEISSYFTGKLLSIVRDAIHHMKKMNNDQ 1792
            L+   +  P  T   +A  +  ++      +  I+   T KLL  V D     +    D+
Sbjct: 1970 LRVLQNGAPDATQKGIAKTQEMDA-----CRDFIARRLTRKLLKTVGDIQERYRMAVTDE 2024

Query: 1793 H-----NSPGVMQTAANIHKVDAPLEFIKHVCAAFALDQNVQHDVLVMRKNLLKYVRVRE 1847
                    P  +   +++H  +  LEF+K  C  F+L ++ Q +V ++++NLL+ V VRE
Sbjct: 2025 EALVYWEFP--LLPGSHLHLTNPLLEFVKFACVIFSLAKDYQLEVGLLKRNLLELVGVRE 2082

Query: 1848 FAPEAEFRDPCPSFILPNVICSYCNDCRDLDLCRDMALLAQD------WHCAMPQCGQPY 1901
            FA EA F +PC    L NV C +C+  R+ D CRD  LL  +      W C    CG  Y
Sbjct: 2083 FASEATFHNPCEPLKLSNVPCCHCDGLREFDFCRDPELLPNNLEVNVRWLCD--NCGGEY 2140

Query: 1902 DREVMENALLQIVRQRERLYHLQDLVCIRCNQVKAAHLAEQCACAGSFRCKEDASDFRSK 1961
            DR  +E AL+ +V   ER +  QDL C +C ++++ +++  C C+GS++      D R K
Sbjct: 2141 DRTTIEFALISMVYDLERRFAQQDLRCSKCKRLQSDNVSRHCQCSGSYQLNMSKVDVRRK 2200

Query: 1962 MQIFLNIANRQGFQLLQECTSWILE 1986
            ++  +N++       L+EC   +L+
Sbjct: 2201 LRTIVNVSIAHNMTRLRECAQMMLD 2225


>gi|340966861|gb|EGS22368.1| DNA polymerase-like protein [Chaetomium thermophilum var.
            thermophilum DSM 1495]
          Length = 2271

 Score = 1339 bits (3465), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 690/1416 (48%), Positives = 938/1416 (66%), Gaps = 68/1416 (4%)

Query: 26   ELEAKLGYDLFSEGDKRLGWLLTFASSSLEDEDT--RKVYSCIDLYFVSQDGSTFKSKYK 83
            +++  +G+  +  G K+ GWL+    ++++D         + +D YF+ +DGSTFK+  +
Sbjct: 56   QIDENMGFARYDAGKKKEGWLVNVHPTAIDDPRVPGGGGRAALDCYFIEEDGSTFKATVE 115

Query: 84   FRPYFYAATKEKMEMDVEAYLRRRYESQIA-DIEILEKEDLDLKNHLSGLHKSYLKISFD 142
            + PYF  A ++  E +VE + +R     +   +  +EKEDL + NHL G  +++L++ F 
Sbjct: 116  YEPYFLVACRKGHEGEVEEWCKRVPGGGVVKSVRRIEKEDLSMPNHLLGYKRTFLELRFH 175

Query: 143  TVQQLMDVKKDLLHVVERNQAKFDAAEAYESILTGK----------------REQRPQDF 186
             VQ LM  ++D++ + E+N+   DA + Y  +                          + 
Sbjct: 176  NVQDLMAARRDIMPIAEKNKKGMDAMDTYAEVANANGNLDLFDIDGRDDDRRNNAGFAEA 235

Query: 187  LDCIVDLREYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLLEKRVDLLQRAEVHVCAFDI 246
             D IVD+REYDVPYH+R  ID D+R G+WY V   +    +    + L  A+  V AFDI
Sbjct: 236  SDHIVDIREYDVPYHVRVMIDLDIRVGKWYFVEAKNGTTTITLNEERLAPADPVVMAFDI 295

Query: 247  ETTKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTN 306
            ETTK PLKFPD   D IMM+SYM+DGQG+LI NRE V EDI D +YTPKPE+ G F + N
Sbjct: 296  ETTKAPLKFPDPAVDQIMMMSYMIDGQGFLITNREIVSEDIRDFDYTPKPEYPGPFMIFN 355

Query: 307  VNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCD-KNQ 365
              +E  +L  +F H++E +P +  TYNGD+FDW F+E RA+ +G  M  E+G++ + ++Q
Sbjct: 356  EPDEKAVLERFFLHVKEARPTVIATYNGDFFDWSFVEARASVNGIDMYHEIGWRKNSEDQ 415

Query: 366  GECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQM 425
             +C   ++ H+DCF WV RDSYLPQGS+GLKAVT AKLGYDP E++PE M  +A E+PQ 
Sbjct: 416  YQC--NYSVHMDCFHWVNRDSYLPQGSRGLKAVTVAKLGYDPDELDPELMTPYASERPQT 473

Query: 426  MASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANV 485
            +A YSVSDAVATYYLYM YVHPFIFSL TI+P+ PD+ LRKG+GTLCEMLLMVQAYK N+
Sbjct: 474  LAEYSVSDAVATYYLYMKYVHPFIFSLCTILPLGPDDTLRKGTGTLCEMLLMVQAYKGNI 533

Query: 486  ICPNKHQSDPEKFYRNHLLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQLLNNLD 545
            + PNKH +  E F+  HLL+SETY+GGHVE LE+GVFRSD+P +F +DPSA ++L+ +LD
Sbjct: 534  VLPNKHVAPKEAFWEGHLLDSETYVGGHVESLEAGVFRSDIPVNFAIDPSAVDELIRDLD 593

Query: 546  RDLQYAIKVEGKMDLESVSNYDEVKNAIMEKLLRLQEEPIREECPLIYHLDVAAMYPNII 605
              L+++I VE K  LE + NYDEV+  I +KLL L+  P R E PLIYHLDVA+MYPNI+
Sbjct: 594  AALKFSITVEEKKKLEDIENYDEVRQQIADKLLGLKATPNRYERPLIYHLDVASMYPNIM 653

Query: 606  LTNRLQPPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYYHLKKQIESEFV 665
             TNRLQP S++++  C ACDFNRPGK C R+L W WRGE    KR +Y  ++  +E+E  
Sbjct: 654  TTNRLQPDSMISESTCAACDFNRPGKNCDRRLPWAWRGEYLPAKRDEYNMIRHALENEKF 713

Query: 666  DGTNGHLS-KSFLDLPKMEQQSRLKDRLKKYCQKAYKRVLDKPVTELREAGICMRENSFY 724
             G   +   +++ DL   EQ S +K RL+ YCQK Y ++ +   T +REA IC REN FY
Sbjct: 714  PGRGPNAPMRTWNDLSADEQASLIKKRLQLYCQKVYHKIHES-TTIVREAIICQRENPFY 772

Query: 725  VDTVRSFRDRRYEYKGLNKVWKGKLSEAKASGN-SIKIQEAQDMVVLYDSLQLAHKCILN 783
            V+TVR FRDRRY++KG  KVWKGK    K+ G  + +I+ A+ M+VL+DSLQLAHK ILN
Sbjct: 773  VNTVRDFRDRRYDFKGKAKVWKGKTEALKSQGAPASEIENAKKMIVLFDSLQLAHKVILN 832

Query: 784  SFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLPGSFP 843
            SFYGYVMRKG+RWYSMEMAGV   TGA IIQ AR LIE++G+PLELDTDGIWC+LPGSFP
Sbjct: 833  SFYGYVMRKGSRWYSMEMAGVTCLTGATIIQMARSLIERLGRPLELDTDGIWCMLPGSFP 892

Query: 844  ENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEFEVD 903
            ENF+FK K+  KK+ ISYPCVMLN  V    TN QYQTLVDP +  YETHS+ SI FEVD
Sbjct: 893  ENFSFKLKN-GKKMNISYPCVMLNHLVHARFTNHQYQTLVDPKTFKYETHSDNSIFFEVD 951

Query: 904  GPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFL 963
            GPYKAMI+P SKEE   +KKRYAVFN DG+LAELKGFE+KRRGELKLIK+FQ ++F  FL
Sbjct: 952  GPYKAMIIPTSKEEDKNLKKRYAVFNHDGSLAELKGFEVKRRGELKLIKIFQQQIFKFFL 1011

Query: 964  HGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLADYGEQKSCAV 1023
             G+T+ ECY+AVA VANRWLD+L N+G  +AD EL+D ISE+ +M+K+LA+Y  QKS ++
Sbjct: 1012 EGTTLSECYAAVAKVANRWLDVLYNKGSTLADEELMDLISENRSMTKTLAEYAGQKSTSI 1071

Query: 1024 TTARRLSDFLGDTMVKDKGLRCQYIVACEPQGTPVSERAVPVAIFETDAEIMKFYLRKWC 1083
            TTA+RL+DFLG+ MVKDKGL C++I+  +P+  PV+ERAVPVAIF  + E  + YL+KW 
Sbjct: 1072 TTAKRLADFLGEGMVKDKGLNCKFIICSKPKNAPVTERAVPVAIFAAEEETKRMYLKKWL 1131

Query: 1084 KTS-SDVGIRSIVDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLYKKVREKE 1142
            +   +D   R+++DW YY +RL S IQK+ITIPAA+QKV NPVPRV HPDWL +++R+K+
Sbjct: 1132 REEPADTDPRALIDWDYYIERLGSVIQKLITIPAALQKVRNPVPRVPHPDWLERRIRQKD 1191

Query: 1143 DKFRQRKLVDIFSSLKKDDFLNKTCNAETNLMDENVEDLEDFPKKRRNSVNGPRPIVRCF 1202
            DK +Q+KL D+FS  KK   L +T     N     + D+ED  K  +     P+ +    
Sbjct: 1192 DKLKQQKLTDVFSISKKP--LEET--EPPNTAASTIGDMEDIGKLLK-----PKTLSEVI 1242

Query: 1203 EVNNEQKTVKTTDQVDSLRQQLEPSEVSDQQPSSQNAIDTENIDRIVDYKGWLELKKRKW 1262
              + +Q   +        R+  EP EV    P +   +  +  D   DY  +LE +K+KW
Sbjct: 1243 SASQQQAKAQK-------RKSPEP-EVQKDDPFA--TLPKKMPDPSEDYVAFLEYQKKKW 1292

Query: 1263 KDNLDRRKKQKLGSLRASHQANGVSESLGDMINHKEAQRRTGVGSYFRRQETAMTRCHWQ 1322
            K     R +++          +   E  G+++       ++ +   FR Q     R  WQ
Sbjct: 1293 KIQKQARARRR----------HLFGERRGNLL-------QSNIQQTFRSQAEMTFRNTWQ 1335

Query: 1323 IIQLVPSSQSGVFLAWVVVEGIMVRIPITVPRLFYLNSK-----DPIVEKFPGRRVNKTL 1377
            ++QL  +   G+ LA+V++E  +  + I VPR  +LN K     D  V+     +V  TL
Sbjct: 1336 VLQLRATESPGIVLAYVLIENKIHAVKINVPRQVFLNLKSKDLPDIEVDGCHVEQVYHTL 1395

Query: 1378 PHGRRSFNLIEVMIDEDQFRKESKKLAALLADPEVE 1413
            P+G  S +L ++ + E+ +  E++K + L   P VE
Sbjct: 1396 PNGHSSVHLFKLTVPEEIYFAEAEKFSLLFNHPSVE 1431



 Score =  254 bits (648), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 174/649 (26%), Positives = 298/649 (45%), Gaps = 78/649 (12%)

Query: 1408 ADPEVEVLGWQQNAAKIGMQRCAASSQWFNERISLARYAHI------------------- 1448
            AD  +  LGWQ  AA+  +    +   W     +LARY  +                   
Sbjct: 1627 ADSSLPPLGWQTVAARRLVNHYLSLGSWITHLTALARYGDVPLCNLEKDDPRFLIDVAYA 1686

Query: 1449 ---------LWISDDGVPDLGGTSEEDECFA-DEVHQPVLTYPGAYRKVSVELKIHHLSV 1498
                     LW S    PD  G  ++D     D+V  P +  PG Y  V ++L++ +L++
Sbjct: 1687 RRLQANNVVLWWSPSPRPDHAGYEKDDVAGPLDQVQMPSVNNPGTYASVCIDLEVRNLAI 1746

Query: 1499 NALLKSNQVNEMEGGGLFGFD--QDMNSGPYNNELCGFDETTSSAPAFRVVKQLIQRCLT 1556
            N +L S+ +NE+EG     F+   D +S    NE+  + E T +  A +V++++++    
Sbjct: 1747 NTILTSSLINELEGAESISFNPAADSSSCGEGNEVL-YAENTFANAAVQVLREMVKSWWA 1805

Query: 1557 DAVTSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEFRKLGATII 1616
            +A   G+  AD ++QHL RW+ SP S L+D  LH  +  + +K    L+ +FR++G+ ++
Sbjct: 1806 EAC-KGSTMADVMVQHLVRWVESPASCLYDRALHYYVQMMSRKALLQLMQDFRRVGSQVV 1864

Query: 1617 FANFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLFMDQYNYGG 1676
            FA+ +++++ T K ++  A AY   +LK+++ + LF +I+LE   +W  L++ D+YNYGG
Sbjct: 1865 FASPNRLLLQTTKTEVGNAFAYAQYILKSIKAKPLFHFIDLEIKEYWDYLVWYDEYNYGG 1924

Query: 1677 IPARADESLDDDSQVDIVSSWNIAEYLPKEIQDHFVLVVSEFMYIPWKHAQKLAASRASL 1736
               +   +   + ++ +V  W +A +LP  +Q  F   V EF+ +   H  K   +    
Sbjct: 1925 KACQEVATDKVEQELQLVMHWQMATFLPLRLQPVFRDWVVEFIEL--MHGLKRPQTTG-- 1980

Query: 1737 QEGSSCTPSIT-------VAAAENFESHIV------QYVKGEISSYFTGKLLSIVRDAI- 1782
             +  + TP +T          AE+    I+      + +K EI +    +   ++   + 
Sbjct: 1981 -DDPTATPRLTQLPVRDNAGLAEDAPGQIILGKAFEKPLKKEIMNLIAAQKRELLHPELA 2039

Query: 1783 ----------HHMKKM-------NNDQHNSPGVMQTAANIHKVDAPLEFIKHVCAAFALD 1825
                       H+  +       ++    SP            +  LE +K +    +LD
Sbjct: 2040 EDYSFPLLPGSHLAHLTPQAALPSSRSSTSPNGKDKTPVSSTANPILELVKSLMQILSLD 2099

Query: 1826 QNVQHDVLVMRKNLLKYVRVREFAPEAEFRDPCPSFILPNVICSYCNDCRDLDLCRDMAL 1885
            +N+  +  ++RK LL    VREF+  A F +P  S  +P   C  C   RDLDLCRD  L
Sbjct: 2100 KNITLEARLLRKELLSLFDVREFSRTAAFVNPSASLRIPQFSCDNCTLARDLDLCRDEDL 2159

Query: 1886 LA-------QDWHCAMPQCGQPYDREVMENALLQIVRQRERLYHLQDLVCIRCNQVK--A 1936
            L         +W  + P CGQ YDR  +E  LL  V      +  QD+ C RC  ++   
Sbjct: 2160 LPNTNEKGENNWVWSCPFCGQEYDRNAVEERLLAEVEGLLVQWTAQDVKCGRCGVLRGEG 2219

Query: 1937 AHLAEQCACAGSFRCKEDASDFRSKMQIFLNIANRQGFQLLQECTSWIL 1985
            A   E C C+G +    D  +   K+ +F N+A   G ++L E    +L
Sbjct: 2220 AEFMEYCTCSGEWVATVDRHEVMRKLGVFRNVAKGYGLRMLGEVVEGVL 2268


>gi|449545459|gb|EMD36430.1| hypothetical protein CERSUDRAFT_66053 [Ceriporiopsis subvermispora B]
          Length = 2211

 Score = 1339 bits (3465), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 689/1427 (48%), Positives = 919/1427 (64%), Gaps = 112/1427 (7%)

Query: 25   EELEAKLGYDLFSEGDKRLGWLLTFASSSLEDEDTRKVYSCIDLYFVSQDGSTFKSKYKF 84
            +E++ KLG+    EG ++ GWL+    + ++D D     + +D YF+  DG  FK   ++
Sbjct: 46   DEIDEKLGFARVQEGPRKEGWLVNMHPTLMKDADWPGGKAAVDYYFIQDDGGMFKCTLQY 105

Query: 85   RPYFYAATKEKMEMDVEAYLRRRYESQIADIEILEKEDLDLKNHLSGLHKSYLKISFDTV 144
             PYFY A K  ME  +E +L ++YE+ I  I    KEDL L NHL G  + YL++ F  V
Sbjct: 106  EPYFYIACKVGMETMIEEWLVKKYEAFIFRISRERKEDLQLPNHLLGHRRLYLQLHFRNV 165

Query: 145  QQLMDVKKDLLHVVERNQAKFDAAEAYESILTGK-------------------------- 178
              L+ V+++L+ +   N AK DA +AY  +++                            
Sbjct: 166  SDLLAVRRELMPLALANSAKLDAVDAYAEVVSSAAHSGLAVEIEGEWEAGLDAGSGAAHG 225

Query: 179  REQRPQDFLDCIVDLREYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLLEKRVDLLQRAE 238
            R  R +D  + I+D+RE+DVPY++R A+DN++R G WY ++ ++  P      + ++RA+
Sbjct: 226  RSSRDKDPREGIIDIREFDVPYYLRVAMDNEIRVGLWYAITFTAGQPSFTLLSERVKRAD 285

Query: 239  VHVCAFDIETTKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEF 298
              V A+DIETTK PLKFPD   D +MMISYM+DGQG+LI NRE V EDIED EYTPK  +
Sbjct: 286  PVVMAYDIETTKAPLKFPDQTIDQVMMISYMVDGQGFLITNREIVSEDIEDFEYTPKEGY 345

Query: 299  EGYFKVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELG 358
            EG F V N  +E   LR +F+H QEVKP +  T+NGD+FD+PFL  RA  HG  M  E+G
Sbjct: 346  EGPFTVFNEPDEAATLRRFFSHFQEVKPTVMATFNGDFFDFPFLYARAKVHGIDMFLEIG 405

Query: 359  FQCDKNQGECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRF 418
            F  D ++ E +++   H+DCF WVKRDSYLPQGSQGLKAVT AKLGY+P+E++PE M  +
Sbjct: 406  FAKD-SEDEFKSRTCVHMDCFRWVKRDSYLPQGSQGLKAVTTAKLGYNPIELDPELMTPY 464

Query: 419  AKEKPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMV 478
            A E+PQ++A YSVSDAVATYYLYM YVHPFIFSL  IIP++PDEVLRKGSGTLCE LLMV
Sbjct: 465  AMEQPQVLAQYSVSDAVATYYLYMKYVHPFIFSLCNIIPLNPDEVLRKGSGTLCETLLMV 524

Query: 479  QAYKANVICPNKHQSDPEKFYRNHLLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYE 538
            +A++  +I PN+H+      Y  HLL SETY+GGHVE LE+GVFRSD+PT FK+ P A +
Sbjct: 525  EAFRGEIIMPNRHEESHGNMYDGHLLASETYVGGHVEALEAGVFRSDIPTHFKIVPEAVQ 584

Query: 539  QLLNNLDRDLQYAIKVEGKMDLESVSNYDEVKNAIMEKLLRLQEEPIREECPLIYHLDVA 598
            +L++ LD  L + I  E    L+SV+NYDEVK  +  KL  +++ P+R + PLIYHLDVA
Sbjct: 585  KLIDELDAALTFCIVEESNASLDSVTNYDEVKKQVQAKLEEMRDNPLRMDKPLIYHLDVA 644

Query: 599  AMYPNIILTNRLQPPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYYHLKK 658
            AMYPNI+L+NRLQP S+V + VC  CD+NRPGKTC R++ W WRGE F  +R ++  +K 
Sbjct: 645  AMYPNIMLSNRLQPDSVVDESVCAVCDYNRPGKTCDRRMTWAWRGEFFPARRDEFNMIKH 704

Query: 659  QIESE-FVDGTNGHLSKSFLDLPKMEQQSRLKDRLKKYCQKAYKRVLDKPVTELREAGIC 717
             +  E F     G   + F+DL + EQ + L  RL  Y +K YK++ D  + E REA IC
Sbjct: 705  ALNQETFPPKRPGGPQRKFVDLTEAEQTALLHKRLGDYSRKVYKKIKDTKI-ENREAIIC 763

Query: 718  MRENSFYVDTVRSFRDRRYEYKGLNKVWKGKLSEAKASGNSI-KIQEAQDMVVLYDSLQL 776
             REN FY+DTVR FRDRRYEYKGL+K WK  L    + G SI ++ EA+ M+VLYDSLQL
Sbjct: 764  QRENPFYIDTVRRFRDRRYEYKGLHKTWKKNLDTVLSEGRSIAEVDEAKKMIVLYDSLQL 823

Query: 777  AHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWC 836
            AHKCILNSFYGYVMRKGARW+SMEMAG+   TGA IIQ AR L+E+IG+PLELDTDGIWC
Sbjct: 824  AHKCILNSFYGYVMRKGARWHSMEMAGITCLTGATIIQMARQLVEQIGRPLELDTDGIWC 883

Query: 837  VLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSEC 896
            +LPG FPENF F   +  K L+ SYPC MLN  V    TN QY  L DP +  Y+THSE 
Sbjct: 884  MLPGIFPENFNFNLAN-GKMLSFSYPCTMLNHLVHAQFTNHQYHDL-DPETGEYKTHSEN 941

Query: 897  SIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQA 956
            SI FE+DGPYKAMILP+SKEE  L+KKRYAVFNDDG+LAELKGFE+KRRGEL+LIK+FQ+
Sbjct: 942  SIFFELDGPYKAMILPSSKEEDKLLKKRYAVFNDDGSLAELKGFEVKRRGELQLIKIFQS 1001

Query: 957  ELFDKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLADYG 1016
            ++F+KFL G+T EECY+AVA +A+RWLD+L ++ +D+ D EL++ I+E+ +MSK+LA+Y 
Sbjct: 1002 QIFEKFLLGTTTEECYAAVAQIADRWLDVLFSRAEDLGDEELVELIAENRSMSKTLAEYA 1061

Query: 1017 EQKSCAVTTARRLSDFLGDTMVKDKGLRCQYIVACEPQGTPVSERAVPVAIFETDAEIMK 1076
             QKS +++TA+RL++FLGD MVKDKGL C++I++  P G PV++RAVPVAIF  +  + +
Sbjct: 1062 GQKSTSISTAKRLAEFLGDQMVKDKGLACKFIISARPMGAPVTDRAVPVAIFSAEESVKR 1121

Query: 1077 FYLRKWCKTSS--DVGIRSIVDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDWL 1134
             YLRKW K SS  +  IRSI+DW YY +R+ S IQK+ITIPAAMQKV+NPVPR+ HPDWL
Sbjct: 1122 TYLRKWLKDSSLTNFDIRSILDWDYYIERMGSVIQKLITIPAAMQKVANPVPRIRHPDWL 1181

Query: 1135 YKKVREKEDKFRQRKLVDIFSSLKKDDFLNKTCNAETNL-MDENVEDLEDFPKKRRNSVN 1193
            +++V   EDKFRQ K+ D F              AE    MD    D+EDF        +
Sbjct: 1182 HRRVAALEDKFRQHKVTDFFKP--------SAGGAEPGQHMDV---DMEDFG-------S 1223

Query: 1194 GPRPIVRC-FEVNNEQKTVKTTDQVDSLRQQLEPSEVSDQQPSSQNAIDTENIDRIVDYK 1252
             P P  R  F + N +   +         ++                  +EN      Y 
Sbjct: 1224 SPPPAARPRFAIVNRKAARREETPEQPPEEKFPHW--------------SEN------YS 1263

Query: 1253 GWLELKKRKWKDNLDRRKKQKLGSLRASHQANGVSESLGDMINHKEAQRRTGVGSYFRRQ 1312
            GWL   +R+W               R +   +  S +L  M               F+  
Sbjct: 1264 GWLRGARRQW---------------RQARSGDEPSNALSSM---------------FKGL 1293

Query: 1313 ETAMTRCHWQIIQLVPSSQSGVFLAWVVVEGIMVRIPITVPRLFYLNSKDPI------VE 1366
             T  +R  W I+Q+ PS   G +  W+ ++  +V IP+ VPR+FYL+ + P        +
Sbjct: 1294 RTKSSR--WDIVQIRPSRVPGRYTLWLSMDSGLVSIPLRVPRVFYLHLRTPPKPSQYKSD 1351

Query: 1367 KFPGRRVNKTLPHGRRSFNLIEVMIDEDQFRKESKKLAALLADPEVE 1413
             +   +V ++LP  R   NL +  + ED F +  +    L+ DP V+
Sbjct: 1352 VYTCEKVVRSLPRDRPCVNLYKFSVREDVFIEGHEHFINLMNDPNVD 1398



 Score =  297 bits (761), Expect = 4e-77,   Method: Compositional matrix adjust.
 Identities = 187/621 (30%), Positives = 315/621 (50%), Gaps = 56/621 (9%)

Query: 1412 VEVLGWQQNAAKIGMQRCAASSQWFNERISLARY-----AH------------------- 1447
            ++V  WQ +     + R      W +  I+LA Y      H                   
Sbjct: 1597 LDVFPWQSSVGHKMLTRYLYMGTWLDRTIALADYYDVPIGHIEGDQPLLLSDIEFARRLV 1656

Query: 1448 ----ILWISDDGVPDLGGTSEEDECFADEVHQPVLTYPGAYRKVSVELKIHHLSVNALLK 1503
                ILW S    PDLGG  E+D   +DE+ +      G +  V +EL + +L+VN++L 
Sbjct: 1657 GQDIILWWSPGDRPDLGGI-EDDRRPSDELPKTEFQSSGCFSNVCLELTVRNLAVNSVLH 1715

Query: 1504 SNQVNEMEG-GGLFGFDQDMNSGPYNNELCGFD----ETTSSAPAFRVVKQLIQRCLTDA 1558
            S  VNE+EG GG   FD       Y      +D    E+  S   F ++K +++  L D 
Sbjct: 1716 SVIVNELEGSGGATAFDSSHTLDEYAGADSKWDLTLGESNVSTQTFAIIKAMVKMWLLDK 1775

Query: 1559 VTSGNVFADAI--LQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEFRKLGATII 1616
            +  GN  + A   + H +RW+ S  S L++P +HR +H +M+K F  +LAEF++LG+ ++
Sbjct: 1776 I-QGNFQSPATVAIDHFWRWISSNSSNLYEPSIHRFIHSLMRKTFIQMLAEFKRLGSHVV 1834

Query: 1617 FANFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLFMDQYNYGG 1676
            +A+ S++++ T K     A AY   ++ A+ + ELF+ + L    F+  LLFMD+ N GG
Sbjct: 1835 YADLSRILLVTSK-PPGTAYAYATYIITAVTSHELFQHVYLHTERFYDFLLFMDEANLGG 1893

Query: 1677 IPARADESLDDDSQVDIVSSWNIAEYLPKEIQDHFVLVVSEFMYIPWKHAQKL-AASRAS 1735
            +      ++D   Q+ I   WNI  +LP  IQ  F  VV  F+   ++ AQK   +SR  
Sbjct: 1894 VVCEDPLAVDPPDQLSIEMRWNIEAFLPPAIQHDFRSVVRFFLVEMFRTAQKTKGSSRVP 1953

Query: 1736 LQEGSSCTPSITVAAAENFESHIVQYVKGEISSYFTGKLLSIVRDAI-HHMKKMNND--- 1791
            L+   +  P  T   A   +   +  V+  ++   T ++L  V +    H + M ++   
Sbjct: 1954 LRVIQTTAPEATQRDAGKAQE--MDAVRDFVARRLTRRMLKAVGNIQERHREAMMDEEAL 2011

Query: 1792 -QHNSPGVMQTAANIHKVDAPLEFIKHVCAAFALDQNVQHDVLVMRKNLLKYVRVREFAP 1850
             Q   P  +   +++H  +  LEF+K  CA F+L ++ Q ++ ++R+NLL+ V VREFA 
Sbjct: 2012 VQWEFP--LLPGSHLHLTNPILEFVKFACAVFSLAKDHQIELGLLRRNLLELVGVREFAN 2069

Query: 1851 EAEFRDPCPSFILPNVICSYCNDCRDLDLCRDMALLAQD------WHCAMPQCGQPYDRE 1904
            EA F++PC +  L ++ C +C+  RD D CRD  LL  +      W C    CG  YDR 
Sbjct: 2070 EAAFQNPCETLKLSSIPCRHCDGLRDFDFCRDPELLPSNLEVHARWTCGT--CGAEYDRT 2127

Query: 1905 VMENALLQIVRQRERLYHLQDLVCIRCNQVKAAHLAEQCACAGSFRCKEDASDFRSKMQI 1964
            ++E AL++++   ER +  QDL C +C Q+++ +++  C C+G+++     +D R +++ 
Sbjct: 2128 MIEFALMEMLFDLERRFAQQDLRCSKCKQIRSDNVSRHCQCSGAYQLTMSKTDVRRRLRT 2187

Query: 1965 FLNIANRQGFQLLQECTSWIL 1985
             +N++       L+EC   +L
Sbjct: 2188 IVNVSLAHNLPRLKECAQTML 2208


>gi|358385905|gb|EHK23501.1| hypothetical protein TRIVIDRAFT_37119 [Trichoderma virens Gv29-8]
          Length = 2219

 Score = 1339 bits (3465), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 691/1419 (48%), Positives = 931/1419 (65%), Gaps = 78/1419 (5%)

Query: 25   EELEAKLGYDLFSEGDKRLGWLLTFASSSLEDEDTRKVYSCIDLYFVSQDGSTFKSKYKF 84
            + ++ K+G+  +  G K+ GWL+    +S+EDE      + +D YF+  DGSTFK+  ++
Sbjct: 51   QSIDDKMGFARYESGKKKEGWLVNVQPTSVEDERIPGGRATLDCYFIELDGSTFKATVEY 110

Query: 85   RPYFYAATKEKMEMDVEAYLRRRYESQIA-DIEILEKEDLDLKNHLSGLHKSYLKISFDT 143
             PY   A K+  E +VE +L+R     +   +  +EKEDL + NHL G  +++++I F  
Sbjct: 111  DPYIVIAVKKGRESEVEEWLKRVPGGGVVKSVRRVEKEDLSMPNHLMGYRRTFIEIRFAN 170

Query: 144  VQQLMDVKKDLLHVVERNQAKFDAAEAYESILTGKRE----------------QRPQDFL 187
            V  LM  K+D++ + E+N+   +A +AY  + T   +                    +  
Sbjct: 171  VSDLMAAKRDIMPIAEKNRKNMNAMDAYAEVATTNGDFDLFDNDLRDDDRNMNNSISEAS 230

Query: 188  DCIVDLREYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLLEKRVDLLQRAEVHVCAFDIE 247
            D IVD+REYDVPYH+R  ID D+R G+WY V        +    D    A+  V A+DIE
Sbjct: 231  DFIVDIREYDVPYHVRVMIDLDIRVGKWYFVEAKHGVTKITLNEDRSLPADPVVMAYDIE 290

Query: 248  TTKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNV 307
            T+KLPLKFPDA  D IMMISYM+DGQG+LI NRE + EDI D +YTPKPE+ G F + N 
Sbjct: 291  TSKLPLKFPDAATDQIMMISYMIDGQGFLITNREIISEDIGDFDYTPKPEYPGPFMIFNE 350

Query: 308  NNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDKNQGE 367
             +E  ++  +F H++E +P +  TYNGD+FDWPF+E RA+ +G  M +E+G++ D ++ +
Sbjct: 351  PDEKSVIERFFLHIKEARPTVIATYNGDFFDWPFVEARASVNGIDMYQEIGWKRD-SEDQ 409

Query: 368  CRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQMMA 427
             +  ++ H+DCF WV RDSYLPQGS+GLKAVT AKLGYDP E++PE M  +A E+PQ +A
Sbjct: 410  FKCNYSVHMDCFHWVNRDSYLPQGSRGLKAVTVAKLGYDPDELDPELMTPYAAERPQTLA 469

Query: 428  SYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVIC 487
             YSVSDAVATYYLYM YVHPFIFSL TI+P+  D+VLRKG+GTLCEMLLMVQAY+  ++ 
Sbjct: 470  EYSVSDAVATYYLYMKYVHPFIFSLCTILPLGGDDVLRKGTGTLCEMLLMVQAYQQEIVL 529

Query: 488  PNKHQSDPEKFYRNHLLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQLLNNLDRD 547
            PNKH +  E F+  HLL+SETY+GGHVE +E+GVFRSD+P +F +DP A ++LL +LD  
Sbjct: 530  PNKHVTPKESFWDGHLLDSETYVGGHVESIEAGVFRSDIPVNFAVDPGAVDELLRDLDNA 589

Query: 548  LQYAIKVEGKMDLESVSNYDEVKNAIMEKLLRLQEEPIREECPLIYHLDVAAMYPNIILT 607
            L++ I VE K  L  V+NYDEVK  IM KL++L+E P R E PLIYHLDVA+MYPNI+ T
Sbjct: 590  LKFVITVEEKKSLSDVTNYDEVKQQIMSKLMQLKETPNRTERPLIYHLDVASMYPNIMTT 649

Query: 608  NRLQPPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYYHLKKQIESE-FVD 666
            NRLQP S++++  C ACDFNRPGKTC R+L W WRGE    KR +Y  ++  +E+E F  
Sbjct: 650  NRLQPDSMISESDCAACDFNRPGKTCDRRLPWAWRGEYIPAKRDEYNMIRHALENEKFPG 709

Query: 667  GTNGHLSKSFLDLPKMEQQSRLKDRLKKYCQKAYKRVLDKPVTELREAGICMRENSFYVD 726
             T     ++F DL   EQ + ++ RL+ Y QK Y ++ D   T +REA IC REN FY++
Sbjct: 710  KTPNAPPRTFQDLSTDEQATLVRKRLQLYSQKVYHKIHDS-TTIIREAIICQRENPFYIN 768

Query: 727  TVRSFRDRRYEYKGLNKVWKGKLSEAKASGN-SIKIQEAQDMVVLYDSLQLAHKCILNSF 785
            TVR FRDRRY+YKG  KVWKGK    K+SG    +I +A+ M++LYDSLQLAHK ILNSF
Sbjct: 769  TVRDFRDRRYDYKGKAKVWKGKTDALKSSGAPGNEIDDAKKMIILYDSLQLAHKVILNSF 828

Query: 786  YGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLPGSFPEN 845
            YGYVMRKG+RWYSMEMAGV   TGA IIQ AR L+E++G+PLELDTDGIWC+LP +FPEN
Sbjct: 829  YGYVMRKGSRWYSMEMAGVTCLTGATIIQLARQLVERLGRPLELDTDGIWCMLPATFPEN 888

Query: 846  FTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEFEVDGP 905
            F+FK K+  KK+ ISYPCVMLN  V    TN QYQTLVDP +  YETHS+ SI FEVDGP
Sbjct: 889  FSFKLKN-GKKMNISYPCVMLNHLVHDKFTNHQYQTLVDPKTFKYETHSDNSIFFEVDGP 947

Query: 906  YKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFLHG 965
            YKAMILP SKEE   +KKRYAVFNDDG+LAELKGFE+KRRGELKLIK+FQ ++F  FL G
Sbjct: 948  YKAMILPTSKEEDKNLKKRYAVFNDDGSLAELKGFEVKRRGELKLIKIFQQQIFKFFLEG 1007

Query: 966  STIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLADYGEQKSCAVTT 1025
              + +CY+AVA VAN+WLD+L N+G  +AD EL++ ISE+ +MSK+L +YG QKS ++TT
Sbjct: 1008 EDLTQCYTAVAKVANQWLDVLHNKGSTLADEELMELISENRSMSKTLEEYGSQKSTSITT 1067

Query: 1026 ARRLSDFLGDTMVKDKGLRCQYIVACEPQGTPVSERAVPVAIFETDAEIMKFYLRKWCKT 1085
            ARRL+DFLG+ MVKDKGL C++I+   P+  PV+ERAVPVAIF  +  + + YL+KW K 
Sbjct: 1068 ARRLADFLGEQMVKDKGLNCKFIICSRPRNAPVTERAVPVAIFSAEETVKRAYLKKWLKE 1127

Query: 1086 S-SDVGIRSIVDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLYKKVREKEDK 1144
              +D   R+++DW YY +RL S IQK+ITIPAA+QKV NPVPRV HPDWL +++  K+DK
Sbjct: 1128 EPADTDPRALLDWDYYLERLGSVIQKLITIPAALQKVRNPVPRVPHPDWLQRRINIKDDK 1187

Query: 1145 FRQRKLVDIFSSLKKDDFLNKTCNAETNLMDENVEDLEDFPKKRRNSVNGPRPIVRCFEV 1204
             +Q+KL D+F+S        +     TN+     ED+EDF  K    +  P+ +      
Sbjct: 1188 MKQKKLTDLFTS-------KEPLADITNINGSRAEDMEDFGSK----LLKPKQLGALIAS 1236

Query: 1205 NNEQKTVKTTDQVDSLRQQLEPSEVSDQQPSSQNAIDTENIDRIVDYKGWLELKKRKWKD 1264
            +  Q T +        R+  EP+E  D   +  N I     D   DY  +L+ +K+KWK 
Sbjct: 1237 SQPQATSQK-------RKSPEPAEEPDPIATLPNVIP----DPSEDYVDFLQYQKKKWKM 1285

Query: 1265 NLDR--RKKQKLGSLRASHQANGVSESLGDMINHKEAQRRTGVGSYFRRQETAMTRCHWQ 1322
                  R++Q  G  R +  +N                    +   F +Q        WQ
Sbjct: 1286 QKQARIRRRQLFGERRGNVSSN--------------------IQQTFMKQAHLTFMNTWQ 1325

Query: 1323 IIQLVPSSQSGVFLAWVVVEGIMVRIPITVPRLFYLNSKDPIVEKFPG--------RRVN 1374
            ++ L  +   G+  A V+++  +  + I VPR  +LN K    E+ P          +VN
Sbjct: 1326 LLHLKATDTPGIVTAHVLIDAKIHTLKINVPRQVFLNLKK---EELPDVEIAGCQVEQVN 1382

Query: 1375 KTLPHGRRSFNLIEVMIDEDQFRKESKKLAALLADPEVE 1413
             TLP+G +S +L ++ + ED +  E++K + L   P VE
Sbjct: 1383 YTLPNGHQSKHLFKLTVPEDVYFNEAEKFSLLFNHPSVE 1421



 Score =  237 bits (605), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 162/621 (26%), Positives = 283/621 (45%), Gaps = 63/621 (10%)

Query: 1408 ADPEVEVLGWQQNAAKIGMQRCAASSQWFNERISLARYAHI------------------- 1448
            +D  +  LGWQ   A+  +        W     +LARY  +                   
Sbjct: 1618 SDSSLPPLGWQAVIARRLVGHYLGLGSWILHLTALARYGDVPLCNLERDDPRFLIDIAYA 1677

Query: 1449 ---------LWISDDGVPDLGGTSEEDECFA-DEVHQPVLTYPGAYRKVSVELKIHHLSV 1498
                     LW S D  PD  G  ++D   + D V  P +  PG +  V ++L + +L++
Sbjct: 1678 RRLQANGVVLWWSPDPRPDHAGYEKDDIIGSLDTVKMPSINNPGTFSSVCIDLDVRNLAI 1737

Query: 1499 NALLKSNQVNEMEGGGLFGFDQDMNSGPYNNELCGFDETTSSAPAFRVVKQLIQRCLTDA 1558
            N +L S+ +NE+EG     F    N     +E+   +   ++A    V++++++    +A
Sbjct: 1738 NTILTSSLINELEGAESISF----NPTADGSEILASENGFANAGVL-VLREMVKAWWAEA 1792

Query: 1559 VTSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEFRKLGATIIFA 1618
               G+  AD ++QHL RW+ +P S ++D  LH  +  + +K F  L+A+FR++G+ +IFA
Sbjct: 1793 C-KGSTMADVLVQHLVRWVENPDSFMYDRALHYYVQMMSRKAFQQLMADFRRVGSQVIFA 1851

Query: 1619 NFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLFMDQYNYGGIP 1678
            + +++I+ T K ++  A AY   ++K+++++ LF +I+LE   +W  L++ D++NYGG  
Sbjct: 1852 SANRLILQTTKAEVGNAFAYSQYIIKSIKSKSLFHFIDLEIKEYWDYLVWYDEFNYGG-R 1910

Query: 1679 ARADESLDDDSQVDIVSSWNIAEYLPKEIQDHFVLVVSEFMYIPWKHAQKLAASRASLQE 1738
            A  + +  D+  ++ +  W +A +LP  +Q  F   V EF+       Q +   +     
Sbjct: 1911 ACQEVAETDEQNLETIMHWQMATFLPVRLQPIFQDWVIEFI-------QLMHKLKRPENN 1963

Query: 1739 GSSCTPSITVAAAENFESH-IVQYVKGE-----ISSYFTGKLLSIVRDAIHHMKKMNNDQ 1792
                TP +T     N E     Q + G+     +     G +    R+ +H     +   
Sbjct: 1964 DPDSTPRLTQLPNRNQEPKDDAQIILGKAFEKPMKKVIVGLINQQKRELMHPELAEDYSF 2023

Query: 1793 HNSPGVMQTAANIHKVDAPLEFIKHVCAAFALDQNVQHDVLVMRKNLLKYVRVREFAPEA 1852
             + PG     +++   +  LE +K +    +LD+N+  +  ++RK LL    VREF+ E 
Sbjct: 2024 PSLPG-----SHLSLRNPILELVKSIMQVLSLDKNITLEARLLRKELLALFEVREFSKEG 2078

Query: 1853 EFRDPCPSFILPNVICSYCNDCRDLDLCRDMALL-------AQDWHCAMPQCGQPYDREV 1905
             F +P  S  L  V C  C   RDLDLCRD  L         Q W C    C   +DR  
Sbjct: 2079 AFTNPSESLKLLQVSCDSCTMARDLDLCRDEDLFGSSGENGGQSWQCGF--CNSEFDRVG 2136

Query: 1906 MENALLQIVRQRERLYHLQDLVCIRCNQVKAAHLAEQCACAGSFRCKEDASDFRSKMQIF 1965
            +E  LL +V      +  QDL C RC  ++     E C C+G ++      +   K+ + 
Sbjct: 2137 IEERLLAMVEGWTTEWASQDLKCERCGALRVNDFMEHCTCSGEWKEVLSRDEVVRKLAVM 2196

Query: 1966 LNIANRQGFQLLQECTSWILE 1986
              +A   G ++L      + E
Sbjct: 2197 KRVAQYYGLKMLGNVVDGLYE 2217


>gi|426374758|ref|XP_004054229.1| PREDICTED: DNA polymerase epsilon catalytic subunit A [Gorilla
            gorilla gorilla]
          Length = 2318

 Score = 1338 bits (3464), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 703/1421 (49%), Positives = 940/1421 (66%), Gaps = 111/1421 (7%)

Query: 25   EELEAKLGYDLFSEGDKRLGWLLTFASSSLEDEDTRKVYSCIDLYFVSQDGSTFKSKYKF 84
            ++++ + G++   E  ++ GWL+    + + DED R + S +D YF+  DGS FK    +
Sbjct: 115  DKMDLRFGFERLKEPGEKTGWLINMHPTEILDEDKR-LGSAVDYYFIQDDGSRFKVALPY 173

Query: 85   RPYFYAATKEKMEMDVEAYLRRRYESQIADIEILEKEDLDLKNHLSGLHKSYLKISFDTV 144
            +PYFY AT++  E +V ++L ++++ +IA +E + KEDLDL NHL GL ++Y+K+SF TV
Sbjct: 174  KPYFYIATRKGCEREVSSFLSKKFQGKIAKVETVPKEDLDLPNHLVGLKRNYIKLSFHTV 233

Query: 145  QQLMDVKKDLLHVVERNQAKFDAAEAYESILTG------------KREQRPQDFLDCIVD 192
            + L+ V+K++   V++N+ +  A++AY ++L+             +  ++  D LD IVD
Sbjct: 234  EDLVKVRKEISPAVKKNREQDHASDAYTALLSSVLQRGGVITDEEETSKKIADQLDNIVD 293

Query: 193  LREYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLLE--KRVDLLQRAEVHVCAFDIETTK 250
            +REYDVPYHIR +ID  +    WY+V        +E  +R DL++R +  V AFDIETTK
Sbjct: 294  MREYDVPYHIRLSIDLKIHVAHWYNVRYRGNAFPVEITRRDDLVERPDPVVLAFDIETTK 353

Query: 251  LPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNVNNE 310
            LPLKFPDA+ D IMMISYM+DGQGYLI NRE V EDIED E+TPKPE+EG F + N  +E
Sbjct: 354  LPLKFPDAETDQIMMISYMIDGQGYLITNREIVSEDIEDFEFTPKPEYEGPFCIFNEPDE 413

Query: 311  IELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDKNQGECRA 370
              L++ WF H+QE KP I VTYNGD+FDWPF+E RAA HG  M +E+GFQ D +QGE +A
Sbjct: 414  AHLIQRWFEHVQETKPTIMVTYNGDFFDWPFVEARAAVHGLSMQQEIGFQKD-SQGEYKA 472

Query: 371  KFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQMMASYS 430
                H+DC  WVKRDSYLP GS  LKA  KAKLGYDP+E++PEDM R A E+PQ +A+YS
Sbjct: 473  PQCIHMDCLRWVKRDSYLPVGSHNLKAAAKAKLGYDPVELDPEDMCRMATEQPQTLATYS 532

Query: 431  VSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVICPNK 490
            VSDAVATYYLYM YVHPFIF+L TIIPM PDEVLRKGSGTLCE LLMVQA+ AN+I PNK
Sbjct: 533  VSDAVATYYLYMKYVHPFIFALCTIIPMEPDEVLRKGSGTLCEALLMVQAFHANIIFPNK 592

Query: 491  HQSDPEKFYRN-HLLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQLLNNLDRDLQ 549
             + +  K   N H+L+SETY+GGHVE LESGVFRSD+P  F+++P+A++ LL  +++ L+
Sbjct: 593  QEQEFNKLTDNGHVLDSETYVGGHVEALESGVFRSDIPCRFRMNPAAFDFLLQRVEKTLR 652

Query: 550  YAIKVEGKMDLESVSNYDEVKNAIMEKLLRLQEEPIREECPLIYHLDVAAMYPNIILTNR 609
            +AI+ E K+ +E V+N++EV + I  KL  L++ P R ECPLIYHLDV AMYPNIILTNR
Sbjct: 653  HAIEEEEKVPVEQVTNFEEVCDEIKSKLASLKDVPSRIECPLIYHLDVGAMYPNIILTNR 712

Query: 610  LQPPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYYHLKKQIESE-----F 664
            LQP ++V +  C ACDFN+PG  C RK+ W WRGE     RS+Y+ ++ Q+ESE     F
Sbjct: 713  LQPSAMVDEATCAACDFNKPGANCQRKMAWQWRGEFMPASRSEYHRIQHQLESEKFPPLF 772

Query: 665  VDGTNGHLSKSFLDLPKMEQQSRLKDRLKKYCQKAYKRVLDKPVTELREAGICMRENSFY 724
             +G     +++F +L + EQ    K RL  YC+KAYK++    V E R   IC RENSFY
Sbjct: 773  PEGP----ARAFHELSREEQAKYEKRRLADYCRKAYKKIHITKVEE-RLTTICQRENSFY 827

Query: 725  VDTVRSFRDRRYEYKGLNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHKCILNS 784
            VDTVR+FRDRRYE+KGL+KVWK KLS A   G++ +++  ++M VLYDSLQLAHKCILNS
Sbjct: 828  VDTVRAFRDRRYEFKGLHKVWKKKLSAAVEVGDAAEVKRCKNMEVLYDSLQLAHKCILNS 887

Query: 785  FYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLPGSFPE 844
            FYGYVMRKGARWYSMEMAG+V +TGA II  AR LIE+IG+PLELDTDGIWCVLP SFPE
Sbjct: 888  FYGYVMRKGARWYSMEMAGIVCFTGANIITQARELIEQIGRPLELDTDGIWCVLPNSFPE 947

Query: 845  NFTFKTKDLKK-KLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEFEVD 903
            NF FKT ++KK K+TISYP  MLN+ V    TNDQYQ L +P S TY T SE SI FEVD
Sbjct: 948  NFVFKTTNVKKPKVTISYPGAMLNIMVKEGFTNDQYQELAEPSSLTYVTRSENSIFFEVD 1007

Query: 904  GPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFL 963
            GPY AMILPASKEEG  +KKRYAVFN+DG+LAELKGFE+KRRGEL+LIK+FQ+ +F+ FL
Sbjct: 1008 GPYLAMILPASKEEGKKLKKRYAVFNEDGSLAELKGFEVKRRGELQLIKIFQSSVFEAFL 1067

Query: 964  HGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLADYGEQKSCAV 1023
             GST+EE Y +VA VA+ WLD+L ++ K                 S +L D G  K    
Sbjct: 1068 KGSTLEEVYGSVAKVADYWLDVLYSKVKAYPPP------------SPALRDEGPCK---- 1111

Query: 1024 TTARRLSDFLGDTMVKDKGLRCQYIVACEPQGTPVSERAVPVAIFETDAEIMKFYLRKWC 1083
                             KG  C ++ +  P       RA+P+AIF+ +  + K +LRKW 
Sbjct: 1112 -----------------KGTPC-FLGSWRP-------RAIPLAIFQAEPTVRKHFLRKWL 1146

Query: 1084 KTSS--DVGIRSIVDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLYKKVREK 1141
            K+SS  D  IR+I+DW YY +RL SAIQKIITIPAA+Q+V NPVPRV HPDWL+KK+ EK
Sbjct: 1147 KSSSLQDFDIRAILDWDYYIERLGSAIQKIITIPAALQQVKNPVPRVKHPDWLHKKLLEK 1206

Query: 1142 EDKFRQRKLVDIFSSLKKDDFLNKTCNAETNLMDENVEDLEDFPKKRRNSVNGPRPIVRC 1201
             D ++Q+K+ ++F+   +         A  +    +  D+EDF       V  P P    
Sbjct: 1207 NDVYKQKKISELFTLEGRRQV--TMAEASEDSPRPSAPDMEDF-----GLVKLPHPAA-- 1257

Query: 1202 FEVNNEQKTVKTTDQVDSLRQQLEPS----EVSDQQPSSQNAIDTENIDRIVDYKGWLEL 1257
              V  ++K V    Q +S  Q L P+    E+  Q P    A+ T   + +V    WL  
Sbjct: 1258 -PVTVKRKRVLWESQEES--QDLTPTVPWQEILGQPP----ALGTTQEEWLV----WLRF 1306

Query: 1258 KKRKW----KDNLDRRKKQKLGSLRASHQANGVSESLGDMINHKEAQRRTGVGSYFRRQE 1313
             K+KW    +  L RRK+Q+L S     +   + +              TG+GS+ RR  
Sbjct: 1307 HKKKWQLQARQRLARRKRQRLESAEGVLRPGAIRDGPA-----------TGLGSFLRRTA 1355

Query: 1314 TAMTRCHWQIIQLVPSSQSGVFLAWVVVEGIMVRIPITVPRLFYLNSKDPIVEKFPG-RR 1372
             ++    WQI+Q+  +SQ+G+F  W +V   +  I +++PR+FY+N +    E+    R+
Sbjct: 1356 RSILDLPWQIVQISETSQAGLFRLWALVGSDLHCIRLSIPRVFYVNQRVAKAEEGASYRK 1415

Query: 1373 VNKTLPHGRRSFNLIEVMIDEDQFRKESKKLAALLADPEVE 1413
            VN+ LP     +NL E  + ED +++   ++ A L+ P++E
Sbjct: 1416 VNRVLPRSNVVYNLYEYSVPEDMYQEHINEINAELSAPDIE 1456



 Score =  320 bits (819), Expect = 8e-84,   Method: Compositional matrix adjust.
 Identities = 192/609 (31%), Positives = 308/609 (50%), Gaps = 70/609 (11%)

Query: 1442 LARYAHILWISDDGVPDLGGTSEEDECFA---DEVHQPVLTYPGAYRKVSVELKIHHLSV 1498
            L R+ H+LW+S    PDLGG   +D C     D+     +   G Y  V VEL + +L+V
Sbjct: 1709 LQRHNHLLWLSPTARPDLGGKEADDNCLVMEFDDQATVEINSSGCYSTVCVELDLQNLAV 1768

Query: 1499 NALLKSNQVNEMEGGGLFGFDQD----------MNSGPYNNELCGFDETTSSAPAFRVVK 1548
            N +L+S+ VN+MEG    G   D          +  G   +    +DET   +  FR++K
Sbjct: 1769 NTILQSHHVNDMEGADSMGISFDVIQQASLEDMITGGQAASAPASYDETALCSNTFRILK 1828

Query: 1549 QLIQRCLTDAVTSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEF 1608
             ++   + +     N++AD  + H YRWL SP S LHDP LHR LH +M+K+F  L+AEF
Sbjct: 1829 SMVVGWVKEITQYHNIYADNQVMHFYRWLRSPSSLLHDPALHRTLHNMMKKLFLQLIAEF 1888

Query: 1609 RKLGATIIFANFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLF 1668
            ++LG+++I+ANF+++I+ T K  +  A AY + +  ++ ++E+F  + +     W  LL+
Sbjct: 1889 KRLGSSVIYANFNRIILCTKKRRVEDAIAYVEYITSSIHSKEIFHSLTISFSRCWEFLLW 1948

Query: 1669 MDQYNYGGIPARADESLD---DDSQV-------------------------------DIV 1694
            MD  NYGGI  +    +     DSQ                                D++
Sbjct: 1949 MDLSNYGGIKGKVSSRIHCGLQDSQKAGGAEDEQENEDDEEERDGEEEEEAEESNVEDLL 2008

Query: 1695 -SSWNIAEYLPK--EIQDHFVLVVSEFMYIPWKHAQKLAASRASLQEGSSCTPSITVAAA 1751
             ++WNI ++LP+    Q++F+++VS ++   + H  K    R++   GS+       +  
Sbjct: 2009 ENNWNILQFLPQAASCQNYFLMIVSAYIVAVY-HCMKDGLRRSA--PGSTPVRRRGTSQL 2065

Query: 1752 ENFESHIVQYVKGEIS---SYFTGKLLSIVRDAIHHMKKMNNDQHNSPGVMQT-----AA 1803
                  +V  + G I+    Y   +L          ++K      NS  + +       +
Sbjct: 2066 SQEAEGVVGALPGMITFSQDYVANELTQSFFTITQKIQKKVTGSRNSTELSEMFPVLPGS 2125

Query: 1804 NIHKVDAPLEFIKHVCAAFALDQNVQHDVLVMRKNLLKYVRVREFAPEAEFRDPCPSFIL 1863
            ++   +  LEFIK+VC   +LD N+ + V  + ++LL+ V V EF+ EA+FRDPC S++L
Sbjct: 2126 HLLLNNPALEFIKYVCKVLSLDTNITNQVNKLNRDLLRLVDVGEFSEEAQFRDPCRSYVL 2185

Query: 1864 PNVICSYCNDCRDLDLCRDM------ALLAQDWHCAMPQCGQPYDREVMENALLQIVRQR 1917
            P VIC  CN CRDLDLC+D       A+L Q W C+   C  PYD   +E  L+++++++
Sbjct: 2186 PEVICRSCNFCRDLDLCKDSSFSEDGAVLPQ-WLCS--NCQAPYDSSAIEMTLVEVLQKK 2242

Query: 1918 ERLYHLQDLVCIRCNQVKAAHLAEQCACAGSFRCKEDASDFRSKMQIFLNIANRQGFQLL 1977
               + LQDLVC++C  VK   +   C+CAG F        F  ++ IF NIA   G   L
Sbjct: 2243 LMAFTLQDLVCLKCRGVKETSMPVYCSCAGDFALTIHTQVFMEQIGIFRNIAQHYGMSYL 2302

Query: 1978 QECTSWILE 1986
             E   W+L+
Sbjct: 2303 LETLEWLLQ 2311


>gi|347972282|ref|XP_315205.4| AGAP004615-PA [Anopheles gambiae str. PEST]
 gi|333469324|gb|EAA10584.4| AGAP004615-PA [Anopheles gambiae str. PEST]
          Length = 2219

 Score = 1338 bits (3463), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 691/1449 (47%), Positives = 951/1449 (65%), Gaps = 73/1449 (5%)

Query: 7    DRQDGRRTKKQKLIRSAE-EELEAKLGYDLFSEGDKRLGWLLTFASSSLEDEDTRKVYSC 65
            ++ DG  T +    +S E ++++ K G++   +  +R G+L+   S+ + +ED R++ + 
Sbjct: 12   EKADGDDTNEIGYRQSRENDQIDQKYGFERVKDTQERTGYLINIHSTEILNED-RRLVAA 70

Query: 66   IDLYFVSQDGSTFKSKYKFRPYFYAATKEKMEMDVEAYLRRRYESQIADIEILEKEDLDL 125
            +D+YF+  DGS +K+   + PY    T++   ++V  +L ++Y  Q+  +E ++KEDLDL
Sbjct: 71   LDMYFLQMDGSRYKTTVIYAPYLLLITRDGNSLEVAKFLGKKYSGQLLSVEHIQKEDLDL 130

Query: 126  KNHLSGLHKSYLKISFDTVQQLMDVKKDLLHVVERNQAKFDAAEAYESILT--------- 176
             NHLSGL ++ LK+SF    Q+  VK+DL   V +N+ +  A   Y  +L+         
Sbjct: 131  PNHLSGLKQNMLKLSFPNTTQMNKVKRDLSSAVRKNREREKANTYYMQMLSTSLSTAIRY 190

Query: 177  ------GKREQRPQDFLDCIVDLREYDVPYHIRFAIDNDVRCGQWYDVSI--SSTGPLLE 228
                  G    +  DF D IVD+RE+DVPYH+R +ID ++ CG WY V        P++ 
Sbjct: 191  DGIEAEGSGPNQNVDFYDYIVDIREHDVPYHVRVSIDLNIFCGTWYTVRCRGGEEPPVIT 250

Query: 229  KRVDLLQRAEVHVCAFDIETTKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIE 288
             R D+L R E  + AFDIETTKLPLKFPDA  D IMMISYM+DGQGYLI NRE +  D+ 
Sbjct: 251  PRPDILDRPEPVILAFDIETTKLPLKFPDAQTDQIMMISYMIDGQGYLITNREIISGDVN 310

Query: 289  DLEYTPKPEFEGYFKVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAH 348
            D EYTPKPEFEG F V N  NE+ LL+ +F H+ EVKP I+VTYNGD+FDWPF+E RAA 
Sbjct: 311  DFEYTPKPEFEGNFIVFNEPNELGLLQKFFDHVLEVKPHIFVTYNGDFFDWPFVEARAAV 370

Query: 349  HGFKMSEELGF-QCDKNQGECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDP 407
            +   M  E+GF + +   G    + A HLDC  WVKRDSYLP GSQGLKAV K+KL YDP
Sbjct: 371  YDLDMKREIGFSKVNGRDGNYLCRPAMHLDCLCWVKRDSYLPVGSQGLKAVAKSKLRYDP 430

Query: 408  LEVNPEDMVRFAKEKPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKG 467
            +E++PE+M R A E+PQ++A+YSVSDAVATYYLYM YVHPFIF+LATIIPM PDE+LRKG
Sbjct: 431  VELDPEEMCRMAVEQPQVLANYSVSDAVATYYLYMKYVHPFIFALATIIPMEPDEILRKG 490

Query: 468  SGTLCEMLLMVQAYKANVICPNKHQSDPEKFYRN-HLLESETYIGGHVECLESGVFRSDL 526
            SGTLCE LLM +A+K N++ PNK  S+  K   + H+L+SETY+GGHVE LESGVFR+D+
Sbjct: 491  SGTLCESLLMKEAFKVNIVFPNKQVSELNKLTNDGHVLDSETYVGGHVEALESGVFRADI 550

Query: 527  PTSFKLDPSAYEQLLNNLDRDLQYAIKVEGKMDLESVSNYDEVKNAIMEKLLRLQEEPIR 586
             T F+LDP   +QL  N+D+ L++AI  E  + L  V+N++EVK  I+  L +L + P R
Sbjct: 551  STRFRLDPDMIKQLQENVDKVLEHAIVTEEGVPLSEVTNFEEVKTEILSALQQLYDIPTR 610

Query: 587  EECPLIYHLDVAAMYPNIILTNRLQPPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEIF 646
             E P+IYHLDV AMYPNIILTNRLQP S+V D  C ACDFN+PG  C R +EW+WRGE+ 
Sbjct: 611  LEQPVIYHLDVGAMYPNIILTNRLQPSSMVNDADCAACDFNKPGARCKRDMEWLWRGEML 670

Query: 647  MGKRSDYYHLKKQIESE-FVDGTNGHLSKSFLDLPKMEQQSRLKDRLKKYCQKAYKRVLD 705
               R+++  +++Q+E+E F     G   ++F +L + +Q +  K RL  YC+KAYK+   
Sbjct: 671  PASRNEFQRIQQQLETEKFPPLFPGGPQRAFHELSREDQANYEKKRLSDYCRKAYKKT-- 728

Query: 706  KPVTEL--REAGICMRENSFYVDTVRSFRDRRYEYKGLNKVWKGKLSEAKASGNSIKIQE 763
              VT L  R + IC +ENSFYVDTVR+FRDRRYEYK L KV K  ++ A  SG++ +I+ 
Sbjct: 729  -KVTRLETRTSTICQKENSFYVDTVRAFRDRRYEYKALTKVAKAAVTAAVKSGDAGEIKA 787

Query: 764  AQDMVVLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKI 823
            A+   VLYDSLQLAHKCILNSFYGYVMRKGARW+SM MAG+V  TG+ II  AR +IE++
Sbjct: 788  AKGREVLYDSLQLAHKCILNSFYGYVMRKGARWHSMPMAGIVCLTGSNIITKAREIIERV 847

Query: 824  GKPLELDTDGIWCVLPGSFPENFTFKTKDLKKK-LTISYPCVMLNVDVARNNTNDQYQTL 882
            G+PLELDTDGIWC+LP SFP+ FT +T   KKK + +SYP  +LN  V  + TNDQY  L
Sbjct: 848  GRPLELDTDGIWCILPASFPQEFTIRTNHQKKKTINVSYPNAVLNTMVKDHFTNDQYHVL 907

Query: 883  VDPVSK-----TYETHSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAEL 937
              P +       Y   SE SI FEVDGPY AM+LPA+KEEG  +KKRYAVFN DG+LAEL
Sbjct: 908  ERPHTADGKQAEYSIRSENSIFFEVDGPYLAMVLPAAKEEGKKLKKRYAVFNFDGSLAEL 967

Query: 938  KGFEIKRRGELKLIKVFQAELFDKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSE 997
            KGFE+KRRGEL+LIK+FQ+ +F+ FL GST+E+CY++VA +A+ WLD+L ++G ++ DSE
Sbjct: 968  KGFEVKRRGELQLIKIFQSSVFEAFLQGSTLEQCYASVAKIADYWLDVLYSKGHNMPDSE 1027

Query: 998  LIDYISESSTMSKSLADYGEQKSCAVTTARRLSDFLGDTMVKDKGLRCQYIVACEPQGTP 1057
            L + ISE+ +MS+ L DYGEQKS +++TA+RL++FLGD MVKD GL C++I++ +P+G P
Sbjct: 1028 LFELISENRSMSRKLEDYGEQKSTSISTAKRLAEFLGDQMVKDAGLACKFIISRKPEGAP 1087

Query: 1058 VSERAVPVAIFETDAEIMKFYLRKWCK--TSSDVGIRSIVDWSYYKQRLSSAIQKIITIP 1115
            V+ERA+P+AIF+++  + + YLR+W K  T  D  IR ++DW+YY +RL   IQKIITIP
Sbjct: 1088 VTERAIPLAIFQSEISVRRHYLRRWLKDNTMGDADIRDVLDWNYYIERLGGTIQKIITIP 1147

Query: 1116 AAMQKVSNPVPRVVHPDWLYKKVREKEDKFRQRKLVDIFSSLKKDDFLNKTCNAETNLMD 1175
            AA+Q ++NPVPRV HPDWL+KK+ +K D  +QR++ ++FS                   +
Sbjct: 1148 AALQGLNNPVPRVQHPDWLHKKMLDKNDTLKQRRISEMFSIAPPKP-------------N 1194

Query: 1176 ENVEDLEDFPKKRRNSVNGPRPIV--RCFEVNNEQKTVKTTDQVDSLRQQLEPSEVSDQQ 1233
              V D+ED  +K+ N      PI   R  E + EQ     T+    + +    +      
Sbjct: 1195 REVTDVEDLVRKQTNGSLAGVPITHKRRREGSEEQDDCLQTEAEQPIPKTWREALGEPPL 1254

Query: 1234 PSSQNAIDTENIDRIVDYKGWLELKKRKWKDNLDRRKKQKLGSLRASHQANGVSESLGDM 1293
            P S  A   E ID       WL+  KRKW+  L +R   +    R    +  +  +  D 
Sbjct: 1255 PGSSRA---ELID-------WLQFHKRKWRWQLSQRNTHR----RDVRNSKRIRTTNDDS 1300

Query: 1294 INHKEAQRRTGVGSYFRRQETAMTRCHWQIIQLVPSSQSGVFLAWVVVEGIMVRIPITVP 1353
            +N   + R   +G + R+ + ++    WQIIQL+P    G F  W +V   + +I +TVP
Sbjct: 1301 VNVAVSARTATLGGFLRKTQRSLIEQSWQIIQLLPMDDMGNFTVWAMVGDELHKIRLTVP 1360

Query: 1354 RLFYLNSKDPIVEKFPG---------RRVNKTLPHGRRSFNLIEVMIDEDQFRKESKKLA 1404
            R+FY+N + P   +  G         ++V++ LP  R  ++L + ++ E  FR     L 
Sbjct: 1361 RIFYVNQRTPAPPEDAGAAGGSKTMWKKVHRVLPRARPVYHLYQYVVPEQVFRDNRLGLL 1420

Query: 1405 ALLADPEVE 1413
            A LA P++E
Sbjct: 1421 ADLATPDIE 1429



 Score =  278 bits (710), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 181/581 (31%), Positives = 278/581 (47%), Gaps = 92/581 (15%)

Query: 1442 LARYAHILWISDDGVPDLGGTSEEDECFADEVH---QPVLTYPGAYRKVSVELKIHHLSV 1498
            L R+  +LW S    PDLGG   +D     E       V    G YR V VEL +  L+V
Sbjct: 1696 LHRHNFVLWFSGGARPDLGGREADDSRLLAEFEDNISVVQNRSGFYRSVCVELTVESLAV 1755

Query: 1499 NALLKSNQVNEMEG-GGLFGFD--------QDMNSGPYNNELCGFDETTSSAPAFRVVKQ 1549
            +ALL++++V E+EG      FD        + + SGP   +L  +DET   + AFRV++ 
Sbjct: 1756 SALLQASKVQELEGTSSAITFDVMPQASLEEMITSGPNGQQLSNYDETALCSQAFRVMRM 1815

Query: 1550 LIQRCLTDAVTSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEFR 1609
            ++   L +   + NVF+D  + H YRW+ S  + L+DP L R L+ +M+K+F  ++AEFR
Sbjct: 1816 MVNTWLREVSINRNVFSDFQIIHFYRWVRSSRALLYDPALRRALNTIMRKLFLQIVAEFR 1875

Query: 1610 KLGATIIFANFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLFM 1669
            ++ ATII+A+F++++IDTGK  +  A +Y D +++ ++ RELF  + L     W  LL+ 
Sbjct: 1876 RMKATIIYADFNRIVIDTGKRTVGDAISYTDYIVQNIRNRELFHSVSLSFQQAWEFLLWN 1935

Query: 1670 DQYNYGGIPARADESLDDDSQVDIVSS--------------WNIAEYLPKEIQDHFVLVV 1715
            D  NYGG+     +   D ++ + ++S              W+I+E LP+E +       
Sbjct: 1936 DPTNYGGVRGNLPKEAIDSNEPNTLTSQDELDEEELALEMNWSISEQLPEERR------- 1988

Query: 1716 SEFMYIPWKHAQKLAASRASLQEGSSCTPSITVAAAENFESHIVQYVK----GEISSYFT 1771
                             RA                  NFES +V +++    G       
Sbjct: 1989 ----------------CRA------------------NFESFVVSFLQTMAEGVSPESAL 2014

Query: 1772 GKLLSIVRDAIHHMKKMNNDQHNSPGVMQTAANIHKVDAPLEFIKHVCAAFALDQNVQHD 1831
             KL  I    +  M        N P               LEFIK +  A A  +  +  
Sbjct: 2015 QKLACIAYGMVQKMHDGCARGANGPA--------------LEFIKAITKALAACKEAEDQ 2060

Query: 1832 VLVMRKNLLKYVRVREFAPEAEFRDPCPSFILPNVICSYCNDCRDLDLCRDMALLAQD-- 1889
            +  MR+N+L  V + +F+ +A +++   SFIL  VIC  CN CRDLDLC+D     +D  
Sbjct: 2061 LTTMRRNMLLLVGIGDFSDKAVWKESRKSFILTEVICQACNHCRDLDLCKDTHRALKDGE 2120

Query: 1890 ---WHCAMPQCGQPYDREVMENALLQIVRQRERLYHLQDLVCIRCNQVKAAHLAEQCACA 1946
               W CA  QC   YD   +E  LL +V+++   Y LQDL CI+C Q+K  +L++ C C 
Sbjct: 2121 LPVWLCA--QCNVDYDNVEIEMRLLDVVQRKLMSYTLQDLRCIKCKQIKRENLSQYCTCT 2178

Query: 1947 GSFRCKEDASDFRSKMQIFLNIANRQGFQLLQECTSWILEV 1987
            G F      S+ R  +Q F  +A      +L+E    +LE 
Sbjct: 2179 GCFENLISTSELRRLLQTFYTLAKDYRMSVLEETVQHLLET 2219


>gi|443895418|dbj|GAC72764.1| DNA polymerase epsilon, catalytic subunit A [Pseudozyma antarctica
            T-34]
          Length = 2305

 Score = 1337 bits (3461), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 696/1449 (48%), Positives = 934/1449 (64%), Gaps = 118/1449 (8%)

Query: 9    QDGRRTKKQKLIRSAEEELEAKLGYDLFSEGDKRLGWLLTFASSSLEDEDTRKVYSCIDL 68
            +DG   +++       ++++ KLG+    +G+ R  WL+    + + D D     S +D 
Sbjct: 52   EDGTAVEERFQEVKVRDDIDEKLGFHRLEQGETRQAWLVNMHPTLIRDPDHPTGKSGVDF 111

Query: 69   YFVSQDGSTFKSKYKFRPYFYAATKEKMEMDVEAYLRRRYESQIADIEILEKEDLDLKNH 128
            YF+  D S FK+   ++PYF    +   E  VE +LRRR+E  I  I+   KEDL L NH
Sbjct: 112  YFIEDDASMFKATVLYQPYFLVGCRPNSESSVEEWLRRRFEGLIQSIQRERKEDLKLPNH 171

Query: 129  LSGLHKSYLKISFDTVQQLMDVKKDLLHVVERNQAKFDAAEAYESIL------------- 175
            L G  + YL+++F  VQ L+ V+K+LL + +  Q K  A + Y  +L             
Sbjct: 172  LMGHKRLYLRLTFLNVQDLLSVRKELLPLAKAAQKKLSAVDTYADVLSAASAAAAGASIE 231

Query: 176  ------------------TGKREQRPQDFLD---CIVDLREYDVPYHIRFAIDNDVRCGQ 214
                              TG R++     LD   C+VD+REYD+PY++R AID D+R G 
Sbjct: 232  IEMDANGESSGLIGEDGWTGGRKRAAASALDPAECLVDIREYDIPYYLRVAIDQDIRVGL 291

Query: 215  WYDVSISSTGPLLEKRVDLLQRAEVHVCAFDIETTKLPLKFPDADYDIIMMISYMLDGQG 274
            WYDVS       L+     ++RA+  V AFDIETTK PLKFPDA+ D IMMISYM+DGQG
Sbjct: 292  WYDVSFKDGVVSLDMVPSRVKRADPVVMAFDIETTKQPLKFPDAETDAIMMISYMIDGQG 351

Query: 275  YLIINRECVGEDIEDLEYTPKPEFEGYFKVTNVNNEIELLRLWFAHMQEVKPGIYVTYNG 334
            +LI NRE V EDIED EYTPK E+EG F + N  +E+ LL+ +F+H +E  P +  TYNG
Sbjct: 352  FLITNREIVSEDIEDFEYTPKDEYEGPFIIFNEPDELALLQRFFSHFREASPTVVATYNG 411

Query: 335  DYFDWPFLETRAAHHGFKMSEELGFQCDKNQGECRAKFACHLDCFAWVKRDSYLPQGSQG 394
            D FD+PF++ RA  H   M +E+GF  D +  E +++   HLDCF WV+RDSYLPQGSQG
Sbjct: 412  DSFDFPFIDARARAHAINMMDEIGFAKDSDN-EYKSRACSHLDCFRWVQRDSYLPQGSQG 470

Query: 395  LKAVTKAKLGYDPLEVNPEDMVRFAKEKPQMMASYSVSDAVATYYLYMTYVHPFIFSLAT 454
            LKAVT AKLGYDP+E++PE M  +A E+PQ +A YSVSDAVATYYLYM YVHPFIFSL  
Sbjct: 471  LKAVTVAKLGYDPMELDPELMTPYAIEQPQTLAQYSVSDAVATYYLYMKYVHPFIFSLCN 530

Query: 455  IIPMSPDEVLRKGSGTLCEMLLMVQAYKANVICPNKHQSDPEKFYRNHLLESETYIGGHV 514
            IIP++PDEVLRKGSGTLCE LLMVQAYK N+I PN+H+      YR HLLESETY+GGHV
Sbjct: 531  IIPLNPDEVLRKGSGTLCETLLMVQAYKGNIIMPNRHEDPVGNTYRGHLLESETYVGGHV 590

Query: 515  ECLESGVFRSDLPTSFKLDPSAYEQLLNNLDRDLQYAIKVEGKMDLESVSNYDEVKNAIM 574
            E LE+GVFRSD+ T F++DP+A +QL+++LD  LQ++I+ EGK+ L+ + NY+EVK  I 
Sbjct: 591  EALEAGVFRSDIETDFRVDPAAIQQLIDDLDAALQFSIREEGKLALDDIENYEEVKAEIR 650

Query: 575  EKLLRLQEEPIREECPLIYHLDVAAMYPNIILTNRLQPPSIVTDEVCTACDFNRPGKTCL 634
              L  ++++P R++CPLIYHLDVAAMYPNI+L+ RLQP S+V++ +C  CD+NRPG  C 
Sbjct: 651  TMLEVMRDDPNRKDCPLIYHLDVAAMYPNIMLSYRLQPDSMVSEAMCATCDYNRPGMKCD 710

Query: 635  RKLEWVWRGEIFMGKRSDYYHLKKQIESE-FVDGTNGHLSKSFLDLPKMEQQSRLKDRLK 693
            ++++W WRGE F  KR +   ++  + SE F         ++F DL   E+ + L  RL 
Sbjct: 711  KRMDWAWRGEYFPAKRDEVNMIRNALASETFPPRFPNQPRRTFEDLEVSERTALLHKRLG 770

Query: 694  KYCQKAYKRVLDKPVTELREAGICMRENSFYVDTVRSFRDRRYEYKGLNKVWKGKLSEAK 753
             Y +K Y++  +   T +REA IC REN FY++TVR FRDRRYEYKGL+K WK  L +A 
Sbjct: 771  DYSRKVYRKTHETK-TVIREAVICQRENPFYINTVRDFRDRRYEYKGLHKTWKKNLDKAD 829

Query: 754  ASGNSIKIQEAQDMVVLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKII 813
            +  +++   EA+ M+VLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAG+   TGA II
Sbjct: 830  SLNDTM---EAKKMIVLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGITCLTGASII 886

Query: 814  QNARLLIEKIGKPLELDTDGIWCVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARN 873
            Q A+ L+E+IG+PLELDTDGIWC+LPG FPENF FK K   KK  ISYPC MLN  V   
Sbjct: 887  QMAKELVERIGRPLELDTDGIWCMLPGVFPENFNFKVKG-GKKFGISYPCTMLNHLVHEK 945

Query: 874  NTNDQYQTLVDPVSKTYETHSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGT 933
             TN QY  LVD  +  YE  SE SI FE+DGPYKAMILP+SKEE  L+KKRYAVFN+DG+
Sbjct: 946  FTNHQYHELVDKKTGRYEVRSENSIFFELDGPYKAMILPSSKEEDKLLKKRYAVFNEDGS 1005

Query: 934  LAELKGFEIKRRGELKLIKVFQAELFDKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDI 993
            LAELKGFE+KRRGEL+LIK FQ ++F+KFL G+T++ECY+AVA VAN+WLD+L ++G  +
Sbjct: 1006 LAELKGFEVKRRGELQLIKDFQKQIFEKFLLGTTLDECYAAVAKVANQWLDVLYSKGSTL 1065

Query: 994  ADSELIDYISESSTMSKSLADYGEQKSCAVTTARRLSDFLGDTMVKDKGLRCQYIVACEP 1053
             D ELID I+E+ +MSK+L +YG QKS A+TTA+RL++FLG  M+KDKGL C++I++ +P
Sbjct: 1066 HDEELIDLIAENKSMSKTLQEYGSQKSTAITTAKRLAEFLGAQMIKDKGLACKFIISAKP 1125

Query: 1054 QGTPVSERAVPVAIFETDAEIMKFYLRKWCKTSS--DVGIRSIVDWSYYKQRLSSAIQKI 1111
             G PV+ERAVPVA+F  +  + + YL+K+ + +S  D  IR+I+DW+YY +R    IQK+
Sbjct: 1126 FGAPVTERAVPVALFNAEPSVKQHYLKKFLRDNSITDFDIRNILDWNYYIERFGGVIQKL 1185

Query: 1112 ITIPAAMQKVSNPVPRVVHPDWLYKKVREKEDKFRQRKLVDIFSSLKKDDFLNKTCNAET 1171
            ITIPAAMQKVSNPVPRV HPDWL+K+V  +E                 D F         
Sbjct: 1186 ITIPAAMQKVSNPVPRVRHPDWLHKRVAARE-----------------DKF--------- 1219

Query: 1172 NLMDENVEDLEDFPKKRRNSVNGPRPIVRCFEVNNEQKTVKTTDQVDSLRQQLEPSEVSD 1231
                           K+R   +  RP  +   +  E  +        +  +++EP E+ +
Sbjct: 1220 ---------------KQRKLTDVFRPAAKPSAI--EASSASKPAAAAAPPKEVEP-EIEE 1261

Query: 1232 QQPSSQNAIDTENIDRIVDYKGWLELKKRKW-KDNLDRRKKQKLGSLRASHQANGVSESL 1290
              P           D  VDY GW+ + K+KW K  L R K++K    RA+  +   S SL
Sbjct: 1262 IAP-----------DMNVDYPGWVAVMKKKWRKQRLQRAKERKA---RAAGASVFGSSSL 1307

Query: 1291 GDMINHKEAQRRTGVGSYFRRQETAMTRCHWQIIQLVPSSQSGVFLAWVVVEGIMVRIPI 1350
            G          +  VGS F ++   M    W ++Q+ PSS+ G +  W+ ++  +  + +
Sbjct: 1308 G----------KGTVGSLFSQRSANMATAVWDVVQICPSSRPGEYRMWISIDQHLQALKL 1357

Query: 1351 TVPRLFYLNSK-DPIVEKF-PG----RRVNKTLPHGRRSFNLIEVMIDEDQFRKESKKLA 1404
             VPR FY+N K +P  E F PG     R+ KTLP      +L  + +DED ++++    +
Sbjct: 1358 KVPRQFYVNFKSNPGNEVFLPGVYEAERLVKTLPRDAPCRHLYRITVDEDVYQEQEAHFS 1417

Query: 1405 ALLADPEVE 1413
             L+  P VE
Sbjct: 1418 NLIHHPNVE 1426



 Score =  271 bits (694), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 196/690 (28%), Positives = 310/690 (44%), Gaps = 115/690 (16%)

Query: 1402 KLAALLADPEVEVLGWQQNAAKIGMQRCAASSQWFNERISLA------------------ 1443
            K+AA   + E+  LGWQ  +A+   Q    ++ W    I LA                  
Sbjct: 1622 KIAAAALEDELPALGWQLYSARRMFQCYLRAASWVRGWIDLAGHFDLPLCNLEKDFTIFG 1681

Query: 1444 ----------RYAHILWISDDGVPDLGGTSEEDECFA--DEVHQPVLTYPGAYRKVSVEL 1491
                      +   +LW S    PDLGG  ++    +  DE     L++PGAY  V +E+
Sbjct: 1682 ADIDFARRLVKQDMVLWWSPHSQPDLGGREQDIHAQSRWDEQESLELSHPGAYATVCLEV 1741

Query: 1492 KIHHLSVNALLKSNQVNEMEG--------GGLFGFDQDMNSGPYNNELCGFDETTSSAPA 1543
             +  L+V+A+L+S  VN+MEG        G     D+       ++ + G D   +SA  
Sbjct: 1742 GLVDLAVDAVLQSGTVNDMEGSSSGVAFEGASHNLDEYSRGTVESSTILG-DSVLTSA-V 1799

Query: 1544 FRVVKQLIQRCLTDAVTSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAM 1603
            F  VK +++          + F+  +  + +RW  S  S + +P L R L  +M+K    
Sbjct: 1800 FSAVKSMVKAWFMTKRRGRSQFSSLLSDNFWRWASSDASAMFEPALQRFLFGLMKKTLLQ 1859

Query: 1604 LLAEFRKLGATIIFANFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFW 1663
            LLAEF++LGA+I++A+F+++ + T K   + A AY   LL A+ +RELF+ ++L+ +H+W
Sbjct: 1860 LLAEFKRLGASIVYASFNRLFLLTTKPSAANAMAYSRYLLSAVTSRELFKHVQLDIIHYW 1919

Query: 1664 HSLLFMDQYNYGGIPARADESLDDDS---------------QVDIVSSWNIAEYLPKEIQ 1708
              LL+MD  N+GG+ A  D  +                     ++  +WNI  +LP  +Q
Sbjct: 1920 EYLLWMDTANFGGVIADVDSLVAPTEEAEAEAARTTKSGMPTFNVEMNWNIQTFLPLAVQ 1979

Query: 1709 DHFVLVVSEFMYIPWKHAQKLAAS----RASLQE-GSSCTPSITVAAAENFE-------- 1755
            D F + V  F++  ++H Q+ A +    R  L+      TP+   A+ ++ E        
Sbjct: 1980 DKFSIAVGSFIFSMYEHKQQAAVAGDLDRTPLRAVAEPNTPANGEASKDDAEDGGKDRDE 2039

Query: 1756 ------SHIVQYVKGEISSYFTGKLL-------------------SIVRDAIHHMKKMNN 1790
                  + + ++    I+   T K+L                   ++ RD       M  
Sbjct: 2040 VVGSAAAAVAKFSTDLINHTMTRKMLKQLASLKTAMQTSSDEINAAVARDEDEEYVDMLT 2099

Query: 1791 DQHNS-------PGVMQTAANIHKVDAPLEFIKHVCAAFALDQNVQHDVLVMRKNLLKYV 1843
             +H         PG     +N       LEFIK   A  AL +    +V ++++NLL  +
Sbjct: 2100 AEHKRAWAFPVLPGSWLAMSN-----PLLEFIKTTTAVLALSRENAIEVQILKRNLLDMI 2154

Query: 1844 RVREFAPEAEFRDPCPSFILPNVICSYCNDCRDLDLCRDMALLAQ--------DWHCAMP 1895
             VREFAPEAEFR+PC  F LP VIC++CND R LDLCRD  L+           W CA  
Sbjct: 2155 NVREFAPEAEFRNPCEPFKLPLVICAFCNDDRTLDLCRDPDLMPNPNAVAQTPKWKCA-- 2212

Query: 1896 QCGQPYDREVMENALLQIVRQRERLYHLQDLVCIRCNQVKAAHLAEQCACAGSFRCKEDA 1955
            +C  PY    +E  L+ I       +HLQDL C +C  +K+ +L   C C+GSF      
Sbjct: 2213 KCAFPYSVAQLEMRLVNIATSYLESFHLQDLRCNKCGALKSTNLQPHCECSGSFGLMVTR 2272

Query: 1956 SDFRSKMQIFLNIANRQGFQLLQECTSWIL 1985
             +   K++    IA       +Q     I+
Sbjct: 2273 KETLKKLRSLHTIAGFHSLHTVQAAVDHII 2302


>gi|328785920|ref|XP_393171.4| PREDICTED: DNA polymerase epsilon catalytic subunit A [Apis
            mellifera]
          Length = 2261

 Score = 1337 bits (3460), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 690/1416 (48%), Positives = 945/1416 (66%), Gaps = 74/1416 (5%)

Query: 32   GYDLFSEGDKRLGWLLTFASSSLEDEDTRKVYSCIDLYFVSQDGSTFKSKYKFRPYFYAA 91
            G+   ++  +R+G+L+   ++ +  ED +++ S +D YF+ +D + FK  Y + PYFY  
Sbjct: 50   GFHRVNDIKERIGYLINMHATEI-IEDDKRLMSGVDYYFLEEDCTRFKISYPYNPYFYIL 108

Query: 92   TKEKMEMDVEAYLRRRYESQIADIEILEKEDLDLKNHLSGLHKSYLKISFDTVQQLMDVK 151
             K+    +V   L ++Y   I  IE + KEDLDL NHL GL + YLK+SF     L  V+
Sbjct: 109  CKKDTYEEVSTGLNKKYTELIQKIETIYKEDLDLPNHLIGLKQKYLKLSFLNTVDLNKVR 168

Query: 152  KDLLHVVERNQAKFDAAEAYESILT---------GKREQRPQDFLDCIVDLREYDVPYHI 202
            +D++  V+ N+ +      Y ++L          G  + +  DF D I+D+REYDVP+HI
Sbjct: 169  RDIMKAVKLNKEREKNNTYYTNMLATVLNSDQDRGNHKMQTIDFTDNILDIREYDVPHHI 228

Query: 203  RFAIDNDVRCGQWYDVSISSTG-PLLEKRVDLLQRAEVHVCAFDIETTKLPLKFPDADYD 261
            R +ID  + CG WY +       PL+ K+ D++   +  V A+DIETTKLPLKFPDAD D
Sbjct: 229  RVSIDMKICCGSWYIIKTRGNDVPLITKKDDIIVPPDPIVLAYDIETTKLPLKFPDADID 288

Query: 262  IIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNVNNEIELLRLWFAHM 321
             IMMISYM+DGQGYLI NRE +  DIED EYTPKPEFEG+F V N  NE   ++ +F H+
Sbjct: 289  QIMMISYMIDGQGYLITNREIISCDIEDFEYTPKPEFEGFFTVFNEPNEKATIKKFFDHI 348

Query: 322  QEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDKNQGECRAKFACHLDCFAW 381
             +++P I+VTYNGD+FDWPF+ETRAA H   M  ++GF  +++ G   ++ A H+DC  W
Sbjct: 349  NDIRPHIFVTYNGDFFDWPFVETRAAFHNIDMKNKIGFSKNRD-GVYNSRPAMHMDCLCW 407

Query: 382  VKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQMMASYSVSDAVATYYLY 441
            V+RDSYLP GSQ LKAV KAKL YDP+E++PEDM R A E+P+ +A+YSVSDAVATYYLY
Sbjct: 408  VRRDSYLPVGSQNLKAVAKAKLRYDPVELDPEDMCRLASEEPETLANYSVSDAVATYYLY 467

Query: 442  MTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVICPNKHQSDPEKFYRN 501
              Y+HPFIF+L TIIPM PDEVLRKGSGTLCE LLMVQA++AN+I PNK + +  K  ++
Sbjct: 468  QKYIHPFIFALCTIIPMEPDEVLRKGSGTLCESLLMVQAFQANIIFPNKQEQELNKLTKD 527

Query: 502  -HLLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQLLNNLDRDLQYAIKVEGKMDL 560
             HLL+ ETY+GGHVE LESGVFR+D+P  FK+ PSA ++L+N +   L++AI+ E K+ +
Sbjct: 528  GHLLDQETYVGGHVEALESGVFRADIPCRFKIVPSAVDELINGVGHALKHAIQEEEKIPM 587

Query: 561  ESVSNYDEVKNAIMEKLLRLQEEPIREECPLIYHLDVAAMYPNIILTNRLQPPSIVTDEV 620
            E V+N++EV   I  KL  L+ +P+R E P+IYHLDV AMYPNIILTNRLQP ++V + V
Sbjct: 588  EMVTNFEEVIEEITVKLKGLRNQPLRLENPVIYHLDVGAMYPNIILTNRLQPSAMVDETV 647

Query: 621  CTACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYYHLKKQIESE-----FVDGTNGHLSKS 675
            C ACD+N+PG  C R ++W+WRGE F    S+Y  +++Q+E+E     F DG      ++
Sbjct: 648  CAACDYNKPGALCQRNMKWMWRGEYFAASLSEYQRMQQQLENEKFPPQFPDGPR----RA 703

Query: 676  FLDLPKMEQQSRLKDRLKKYCQKAYKRVLDKPVTELREAG--ICMRENSFYVDTVRSFRD 733
            F +L K EQ S  K RL +YC+KAYK+V    +T + E    +C +ENSFYVDTVR+FRD
Sbjct: 704  FHELSKEEQASYEKKRLTEYCKKAYKKV---KITNMEEKTQTVCQKENSFYVDTVRAFRD 760

Query: 734  RRYEYKGLNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHKCILNSFYGYVMRKG 793
            RRYEYK L K+ K +++ A A G++  I+ A++  VLYDSLQLAHKCILNSFYGYVMRKG
Sbjct: 761  RRYEYKALTKIAKQEVAVALAKGDAADIKSAKNREVLYDSLQLAHKCILNSFYGYVMRKG 820

Query: 794  ARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLPGSFPENFTFKTKD- 852
            +RW+SMEM G+V YTGA II  AR +IE++G+PLELDTDGIWCVLP SFP+N    T   
Sbjct: 821  SRWFSMEMGGIVCYTGAHIIMRAREIIEQVGRPLELDTDGIWCVLPASFPDNVVVHTTHP 880

Query: 853  LKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEFEVDGPYKAMILP 912
             KKKL ISYP  +LN  V    TND Y  LVD  + TY+   E SI FEVDGPY AM+LP
Sbjct: 881  KKKKLAISYPNAVLNFMVKNQFTNDVYHELVDSENFTYKVRHENSIFFEVDGPYLAMVLP 940

Query: 913  ASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFLHGSTIEECY 972
            A+KEEG  +KKRYAVFN DG+LAELKGFE+KRRGEL+LIKVFQ  +F+ FL G+T+EECY
Sbjct: 941  AAKEEGKKLKKRYAVFNFDGSLAELKGFEVKRRGELQLIKVFQTSVFESFLKGNTLEECY 1000

Query: 973  SAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLADYGEQKSCAVTTARRLSDF 1032
            ++VA  A+ WLD+L ++  D+ DSEL + ISE+ +MS+ L DYG QKS +++TA+RL++F
Sbjct: 1001 ASVAKDADYWLDILYSKCADMPDSELFELISENKSMSRKLEDYGGQKSTSISTAKRLAEF 1060

Query: 1033 LGDTMVKDKGLRCQYIVACEPQGTPVSERAVPVAIFETDAEIMKFYLRKWCKTSS--DVG 1090
            LGD MVKD GL C+YI+A +PQG PV+ERA+P+AIF+++  I K+YLRKW K  S  +  
Sbjct: 1061 LGDQMVKDAGLACKYIIANKPQGAPVTERAIPLAIFQSEPAIRKYYLRKWLKDPSLQNDD 1120

Query: 1091 IRSIVDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLYKKVREKEDKFRQRKL 1150
            IR+I+DWSYY +RL SAIQKIITIPAAMQ + NPVPRV HPDWL+K+V EK    +QRK+
Sbjct: 1121 IRNILDWSYYIERLGSAIQKIITIPAAMQGLPNPVPRVKHPDWLHKRVMEKSATHKQRKI 1180

Query: 1151 VDIFSSLKKDDFLNKTCNAETNLMDENVEDLEDFPKKRRNSVNGPRPIVR-CFEVNNEQK 1209
             D+FS + KD   +   N+E++    +  D+ED        + G  PI +    + N++K
Sbjct: 1181 TDVFSVIHKDKEKDNDHNSESS----DTCDVED--------IAGKAPIFKQPIPIANKRK 1228

Query: 1210 TVKTTDQVDSLRQQLEPSEVSDQQPS------SQNAIDTENIDRIVDYKGWLELKKRKWK 1263
                       RQ  E +E+ +   +      S   + T   +R+     WL+  K+KW 
Sbjct: 1229 -----------RQNSEENELENANKNWKDVLGSPPPMGTTKEERL----EWLKFHKQKWA 1273

Query: 1264 DNLDRRKKQKLGSLRASHQANGVSESLGDMINHKEAQRRTGVGSYFRRQETAMTRCHWQI 1323
                +R + +          NG   S G   N       + +G + RR +  +    WQI
Sbjct: 1274 YQAKQRAEYQKSKKSKHFNDNGDRISWGVTRN----INTSTLGGFLRRAQRKLFMTPWQI 1329

Query: 1324 IQLVPSSQSGVFLAWVVVEGIMVRIPITVPRLFYLNSKDPIVEKFPGRRVN-----KTLP 1378
            IQ+  +++ G++  W+++E    ++ + VPR+FY+N++ P  +  PG++V+     K LP
Sbjct: 1330 IQISQTNEPGLYRLWILIEKDFHQLRLVVPRIFYVNTRKPKPDPEPGKKVSWKKSMKILP 1389

Query: 1379 HGRRSFNLIEVMIDEDQFRKE-SKKLAALLADPEVE 1413
              R  +NL +  + E   +   SK+L   L+ PE+E
Sbjct: 1390 RSRPVYNLYQYSVSEINIKNTVSKELLEDLSKPEIE 1425



 Score =  295 bits (754), Expect = 3e-76,   Method: Compositional matrix adjust.
 Identities = 174/576 (30%), Positives = 297/576 (51%), Gaps = 44/576 (7%)

Query: 1442 LARYAHILWISDDGVPDLGGTSEEDECFA---DEVHQPVLTYPGAYRKVSVELKIHHLSV 1498
            L +   +LW S    PDLGG+  +D       +E  Q      G Y  V +EL+I +L+V
Sbjct: 1683 LQKNNFVLWCSPTEKPDLGGSEHDDNRLLTDFEESSQCAANNFGTYSSVCIELEIENLAV 1742

Query: 1499 NALLKSNQVNEMEGGGLF-GFD-------QDMNSG-PYNNELCGFDETTSSAPAFRVVKQ 1549
            N LL+ + +++++G   F  F        QDM  G    N +  +DE    +PAFR ++ 
Sbjct: 1743 NTLLQYHHIHDIDGTSNFVAFHNQQQTSVQDMAMGDSMTNTIPSYDEIVLCSPAFRSLRS 1802

Query: 1550 LIQRCLTDAVTSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEFR 1609
            ++   L D     NVFAD  + H YRWL SP++ L+DP L R LH  M+K+F  LLAEF+
Sbjct: 1803 MVNAWLLDVSVYKNVFADYQIIHFYRWLRSPNALLYDPALRRTLHTYMKKLFVQLLAEFK 1862

Query: 1610 KLGATIIFANFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLFM 1669
             LG+ I+FANF+K+I+ T K  ++ A  Y + +++ ++ +E+F  IE+     W  L ++
Sbjct: 1863 TLGSIIVFANFNKIIVCTKKRAVNDALGYIEFVVQTIRNKEIFHSIEITFEQCWEYLKWL 1922

Query: 1670 DQYNYGGIPARADESLDDD------------------SQVDIVSSWNIAEYLPKEI--QD 1709
            D +NY GI  +  +++ +                      +IV +WN+ E LPKE   Q 
Sbjct: 1923 DIHNYAGIKGKLTQNMQESIANKNVNDENSENEDEDEDTPEIVMNWNLMECLPKEAACQS 1982

Query: 1710 HFVLVVSEFMYIPWK--HAQKLAASRASLQEGSSCTPSITVAAAENFESHIVQYVKGEIS 1767
             F  +++ ++   ++     +L A         S    + + + EN  +   + + G++S
Sbjct: 1983 SFSAIIAGYINAIYQFISENELNAIPKRKSNSQSLAAQLGLGSLENTANFAKKLISGDMS 2042

Query: 1768 SYFTGKLLSIVRDAIHHMKKMNNDQHNSPGVMQTAANIHKVDAPLEFIKHVCAAFALDQN 1827
                 KL  IV+     + ++       P +     +  +++  LE +K VC   +LD+ 
Sbjct: 2043 Q----KLFQIVQKIYKKLPEVTLTIQEYPNLDLDGKDSKRINPALELVKSVCKVLSLDKE 2098

Query: 1828 VQHDVLVMRKNLLKYVRVREFAPEAEFRDPCPSFILPNVICSYCNDCRDLDLCRD-MALL 1886
            V+++V  ++ NLL+ +R+  F+ E E++DPC S ILP +IC  CN  RD+DLC+D   ++
Sbjct: 2099 VENEVYHLQTNLLRLIRIGSFSDEVEWKDPCISLILPEIICKACNHTRDIDLCKDNFCIM 2158

Query: 1887 AQD---WHCAMPQCGQPYDREVMENALLQIVRQRERLYHLQDLVCIRCNQVKAAHLAEQC 1943
             Q+   W C  P C   YD E +E  L+ ++ ++   Y LQDL C +C ++K  ++ E C
Sbjct: 2159 EQNRYIWKC--PLCKTSYDNEEIEFLLIDLLNRKSMGYILQDLQCCKCKEIKRENMNELC 2216

Query: 1944 ACAGSFRCKEDASDFRSKMQIFLNIANRQGFQLLQE 1979
            +C+G+F+      +    M+I  ++A +   + L E
Sbjct: 2217 SCSGNFKTLIPKDEIVKFMKICKSVARKCDMETLME 2252


>gi|336366075|gb|EGN94423.1| hypothetical protein SERLA73DRAFT_96562 [Serpula lacrymans var.
            lacrymans S7.3]
          Length = 2239

 Score = 1337 bits (3460), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 694/1428 (48%), Positives = 921/1428 (64%), Gaps = 102/1428 (7%)

Query: 25   EELEAKLGYDLFSEGDKRLGWLLTFASSSLEDEDTRKVYSCIDLYFVSQDGSTFKSKYKF 84
            +E++ KLG+    EG KR GWL+    + ++D D     + +D YF+  DG  FK   ++
Sbjct: 73   DEVDEKLGFARIQEGGKRDGWLINMHPTLIKDADYPSGKAAVDFYFIQDDGGMFKCTLQY 132

Query: 85   RPYFYAATKEKMEMDVEAYLRRRYESQIADIEILEKEDLDLKNHLSGLHKSYLKISFDTV 144
             PYFY A K   E  VE +L +RYE  I  I    KEDL L NHL G  + YL++ F  V
Sbjct: 133  EPYFYIACKSGAETMVEEWLMKRYEGIICRITRDRKEDLKLPNHLMGHRRLYLQLCFRNV 192

Query: 145  QQLMDVKKDLLHVVERNQAKFDAAEAYESILTGKREQ----------------------- 181
              L+ V++D+  +   N AK DA +AY  +++                            
Sbjct: 193  SDLLTVRRDIAPLALANGAKRDAVDAYAEVVSATASANINIELEGEWAEFGGSSTTGSSF 252

Query: 182  RPQDFLDCIVDLREYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLLEKRVDLLQRAEVHV 241
            R +D  +CI+D+REYDVPY++R AIDN++R G WY V+ ++  P   + V+ ++RA+  V
Sbjct: 253  RERDPGECIIDIREYDVPYYLRVAIDNELRVGLWYAVTFTAGQPSFTQIVERVKRADPVV 312

Query: 242  CAFDIETTKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGY 301
             A+DIETTK PLKFPD   D +MMISYM+DGQGYLI NRE V EDIED EYTPK  +EG 
Sbjct: 313  MAYDIETTKAPLKFPDQAIDQVMMISYMVDGQGYLITNREIVSEDIEDFEYTPKEGYEGP 372

Query: 302  FKVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQC 361
            F V N  +E   +  +F H+QEVKP +  T+NGD+FD+PFL  RA  +G  M  E GF  
Sbjct: 373  FIVFNEPDEAATMMRFFQHIQEVKPTVMATFNGDFFDFPFLCARAKANGIDMFLETGFAI 432

Query: 362  DKNQGECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKE 421
            D ++ E + +   H+DCF WVKRDSYLPQGSQGLKAVT AKLGY+P+E++PE M  +A E
Sbjct: 433  D-SEDEFKCRTCVHMDCFRWVKRDSYLPQGSQGLKAVTTAKLGYNPIELDPELMTPYAME 491

Query: 422  KPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAY 481
            +PQ++A YSVSDAVATYYLYM YVHPFIFSL  IIP+ PDEVLRKGSGTLCE LLMV+AY
Sbjct: 492  QPQVLAQYSVSDAVATYYLYMKYVHPFIFSLCNIIPLCPDEVLRKGSGTLCETLLMVEAY 551

Query: 482  KANVICPNKHQSDPEKFYRNHLLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQLL 541
            +  +I PN+H+      ++ HLL SETY+GGHVE LE+GVFRSD+P+ FK+ PSA +QL+
Sbjct: 552  RGRIIMPNRHEDAHGNMHQGHLLASETYVGGHVEALEAGVFRSDIPSDFKVVPSAVQQLI 611

Query: 542  NNLDRDLQYAIKVEGKMDLESVSNYDEVKNAIMEKLLRLQEEPIREECPLIYHLDVAAMY 601
            ++LD  L + I  E K  LE+V+NYDEVKN I   L  +++ P R + PLIYHLDVAAMY
Sbjct: 612  DDLDAALMFCIVEESKSSLENVTNYDEVKNEIQAALEVMRDNPKRTDKPLIYHLDVAAMY 671

Query: 602  PNIILTNRLQPPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYYHLKKQIE 661
            PNI+L+NRLQP S+V + VC  CD+NRPGKTC R+LEW WRGE F   R ++  ++  + 
Sbjct: 672  PNIMLSNRLQPDSMVDESVCAVCDYNRPGKTCDRRLEWAWRGEFFPAHRDEFNMIRHALN 731

Query: 662  SE-FVDGTNGHLSKSFLDLPKMEQQSRLKDRLKKYCQKAYKRVLDKPVTELREAGICMRE 720
             E F     G   + F DL + EQ + L  RL  Y +K YK++ D  + E RE+ +C RE
Sbjct: 732  QESFPSKRPGGPQRKFADLTETEQTALLHKRLGDYSRKVYKKIKDTKI-ETRESIVCQRE 790

Query: 721  NSFYVDTVRSFRDRRYEYKGLNKVWKGKLSEAKASGNSI-KIQEAQDMVVLYDSLQLAHK 779
            N FYVDTVR FRDRRYEYKGL+K WK  L      G SI ++ EA+ M+VLYDSLQLAHK
Sbjct: 791  NPFYVDTVRRFRDRRYEYKGLHKTWKKNLDTVVGEGRSIAEVDEAKKMIVLYDSLQLAHK 850

Query: 780  CILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLP 839
            CILNSFYGYVMRKGARW+SMEMAG+   TGA IIQ AR L+E+IG+PLELDTDGIWC+LP
Sbjct: 851  CILNSFYGYVMRKGARWHSMEMAGITCLTGATIIQMARALVEQIGRPLELDTDGIWCMLP 910

Query: 840  GSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIE 899
            G FPENF FK  +  K +  SYPC MLN  V    TN QY  L DP +  Y  HSE SI 
Sbjct: 911  GVFPENFKFKLNN-GKSIAFSYPCTMLNHLVHAQFTNHQYHDL-DPETGEYVVHSENSIF 968

Query: 900  FEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELF 959
            FE+DGPY+AMILP+SKEE  L+KKRYAVFNDDG+LAELKGFE+KRRGEL+LIK+FQ+++F
Sbjct: 969  FELDGPYRAMILPSSKEEDKLLKKRYAVFNDDGSLAELKGFEVKRRGELQLIKIFQSQIF 1028

Query: 960  DKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLADYGEQK 1019
            +KFL GST EECY+AVA VA++WLD+L ++ + + D EL+D I+E+ +MSK+LA+YG QK
Sbjct: 1029 EKFLLGSTTEECYAAVAEVADQWLDILFSKAETLGDDELVDLIAENRSMSKTLAEYGGQK 1088

Query: 1020 SCAVTTARRLSDFLGDTMVKDKGLRCQYIVACEPQGTPVSERAVPVAIFETDAEIMKFYL 1079
            S +++TA+RL++FLGD MVKDKGL C++I++  P G PV+ERA+P+AIF  +  + + YL
Sbjct: 1089 STSISTAKRLAEFLGDQMVKDKGLACKFIISARPMGAPVTERAIPIAIFSAEESVKRTYL 1148

Query: 1080 RKWCKTSS--DVGIRSIVDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLYKK 1137
            RKW K +S  +  +RSI+DW YY +RL S IQK+ITIPAAMQKV+NPVPRV HPDWL+++
Sbjct: 1149 RKWLKDNSLTNFDLRSILDWDYYIERLGSVIQKLITIPAAMQKVTNPVPRVRHPDWLHRR 1208

Query: 1138 VREKEDKFRQRKLVDIFSSLKKDDFLNKTCNAETNLMDENVEDLEDFPKKRRNSVNGPRP 1197
            V    DKF+Q K+ D FS +                  +   D+ED  K   N  + PR 
Sbjct: 1209 VAGAIDKFKQNKVTDFFSRVTPG--------------QQQEMDIEDSGK---NEFDRPR- 1250

Query: 1198 IVRCFEVNNEQKTVKTTDQVDSLRQQLEPSEVSDQQPSSQNAIDTENIDRIVDYKGWLEL 1257
                  V N ++T + +  +D        + + D +               + Y  WL  
Sbjct: 1251 ----IAVVNRKRTRRDSTPLDEDEDADIDAPLPDPR---------------ISYFSWLRA 1291

Query: 1258 KKRKWKDNLDRRKKQKLGSLRASHQANGVSESLGDMINHKEAQRRTGVGSYFRRQETAMT 1317
             K +WK    +R++ + G   A+     V  S+      K A+ RT              
Sbjct: 1292 MKPRWK----KRREARWGDSTAA-----VVPSM-----FKGARIRTN------------- 1324

Query: 1318 RCHWQIIQLVPSSQSGVFLAWVVVEGIMVRIPITVPRLFYLN----SKDPIVEK--FPGR 1371
               W I+Q+ PS   G F  W+ ++G +  + + +PR+FYL+     KD + +   +   
Sbjct: 1325 -HRWDIVQIRPSKIQGRFTLWLSIDGELTPVALRIPRVFYLHLKSLPKDDLFQTGHYSCD 1383

Query: 1372 RVNKTLPHGRRSFNLIEVMIDEDQFRKESKKLAALLADPEVEVLGWQQ 1419
            +V + LP G     L +V + ED +++  +    L+ DP V+ +  QQ
Sbjct: 1384 KVIRNLPRGLHCSYLYKVTVREDVYQEIQEHFTDLINDPNVDGVFEQQ 1431



 Score =  287 bits (734), Expect = 6e-74,   Method: Compositional matrix adjust.
 Identities = 192/631 (30%), Positives = 310/631 (49%), Gaps = 72/631 (11%)

Query: 1412 VEVLGWQQNAAKIGMQRCAASSQWFNERISLARY-----AHI------------------ 1448
            ++V  WQ + A+  + R  +   W +  + LA Y      HI                  
Sbjct: 1623 LDVFPWQTHVAQKLLYRYLSVGGWLDRLVVLADYYDVPIGHIEGDQPLLLSDITFARRLI 1682

Query: 1449 -----LWISDDGVPDLGGTSEEDECFADEVHQPVLTYPGAYRKVSVELKIHHLSVNALLK 1503
                 LW S    PDLGG  E+D    +E+       PG Y  V +++ + +L+VN++L 
Sbjct: 1683 QQDTVLWWSPSERPDLGGL-EDDFRPVEELQNTEFMSPGCYSNVCLDVAVRNLAVNSVLH 1741

Query: 1504 SNQVNEMEG-GGLFGFDQ------DMNSGPYNNELCGFDETTSSAPAFRVVKQLIQRCLT 1556
            S  VNE+EG GG   FD       + ++G    ++    E++ S   F +++ +++  L 
Sbjct: 1742 SVVVNELEGSGGTTAFDSVSRTLDEYSTGDAQRDIT-LGESSLSPQTFGILRTMVKGWLL 1800

Query: 1557 DAVTSGNVFADAIL--QHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEFRKLGAT 1614
            D +  GN  + A L   H +RW+ +  S +HDP +HR +H +M+K F  +LAEF++LGA 
Sbjct: 1801 DRI-QGNFDSPATLAIDHFWRWVSTSASNMHDPSIHRFVHGLMRKTFIQMLAEFKRLGAH 1859

Query: 1615 IIFANFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLFMDQYNY 1674
            +++A+FS +++ T K     A AY   +  A+ + ELF+ I L+   F+  LLFMD  N 
Sbjct: 1860 VVYADFSHILLATSK-PPGTAHAYATYVATAVTSHELFQHIYLKAERFYDFLLFMDPANM 1918

Query: 1675 GGIPARADESLDDDSQVDIVSSWNIAEYLPKEIQDHFVLVVSEFMYIPWKHAQKL-AASR 1733
            GG+      ++D   ++ I   WNI  +LP  IQD F  V+  F+   ++  QK   ASR
Sbjct: 1919 GGVVCEDPLAVDPPEELSIEMRWNIQTFLPPAIQDDFGKVLQYFIVELFQIRQKTNEASR 1978

Query: 1734 ASLQEGSSCTPSITVAAAENFESHIVQYVKGEISSYFTGKLLSIV-------RDAIHHMK 1786
              L+   +  P  T   A       +   +  I+   T +LL +V       RDA+    
Sbjct: 1979 VPLRVLKNSAPDTTQRDAGKVNE--MDATREFIARRLTRRLLKVVGSIQAKLRDAV---- 2032

Query: 1787 KMNNDQHNS------PGVMQTAANIHKVDAPLEFIKHVCAAFALDQNVQHDVLVMRKNLL 1840
              + D H        PG     +++H ++  LEFIK  CA   L Q  + +V ++++NLL
Sbjct: 2033 -TDEDLHEKFEFPLLPG-----SHLHLINPILEFIKFTCAVLGLAQEYRIEVGLLKRNLL 2086

Query: 1841 KYVRVREFAPEAEFRDPCPSFILPNVICSYCNDCRDLDLCRDMALLAQDWHCAMPQ---- 1896
                VREFA EA FR+PC    L NV C +C+  R+ D CRD  L+        P+    
Sbjct: 2087 DLAGVREFATEAIFRNPCEPLRLANVPCRHCDTLREFDFCRDPELMPNGLDITPPRWLCG 2146

Query: 1897 -CGQPYDREVMENALLQIVRQRERLYHLQDLVCIRCNQVKAAHLAEQCACAGSFRCKEDA 1955
             CG  YDR  +E  L+++V   ER +  QDL C +C QV++ +++  C C+G+++   + 
Sbjct: 2147 GCGVEYDRIAIELELMRMVCSLERSFAQQDLRCAKCKQVRSDNVSRYCQCSGAYQLTMNK 2206

Query: 1956 SDFRSKMQIFLNIANRQGFQLLQECTSWILE 1986
            ++ R +++  +N+A   G   L E     LE
Sbjct: 2207 AEVRRRLRTVVNVAIVHGMAKLAEIAQATLE 2237


>gi|299739048|ref|XP_001835018.2| DNA polymerase epsilon catalytic subunit A [Coprinopsis cinerea
            okayama7#130]
 gi|298403598|gb|EAU86784.2| DNA polymerase epsilon catalytic subunit A [Coprinopsis cinerea
            okayama7#130]
          Length = 2229

 Score = 1337 bits (3460), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 689/1425 (48%), Positives = 920/1425 (64%), Gaps = 105/1425 (7%)

Query: 22   SAEEELEAKLGYDLFSEGDKRLGWLLTFASSSLEDEDTRKVYSCIDLYFVSQDGSTFKSK 81
            +  +E++ KLG+    EG KR GWL+    ++++D D     + +D YF+  DG +FK  
Sbjct: 62   AVNDEVDEKLGFARIQEGPKREGWLINMHPTTVKDPDWPSGRAAVDYYFIQDDGGSFKCT 121

Query: 82   YKFRPYFYAATKEKMEMDVEAYLRRRYESQIADIEILEKEDLDLKNHLSGLHKSYLKISF 141
            +++ PYFY A K   E  VE ++++R+E  +  I   +KEDL + NHL G  + +L+I F
Sbjct: 122  FQYEPYFYIACKTGTETIVEEWMKKRFEGLVYRIARDKKEDLKMPNHLMGHRRLFLQICF 181

Query: 142  DTVQQLMDVKKDLLHVVERNQAKFDAAEAYESILTGKRE---------------QRPQDF 186
              +  L+ V+++++ +   N AK DA +AY  ++                     +P D 
Sbjct: 182  RNISDLLAVRREIMPLALANGAKRDAVDAYAEVVRATASMDIEMEDETQAWGASSKPSDT 241

Query: 187  --LDCIVDLREYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLLEKRVDLLQRAEVHVCAF 244
               +CI+D+REYDVPYH+R AIDND+R G WY ++ ++  P      + ++RA+  V A+
Sbjct: 242  DPRECIIDIREYDVPYHLRVAIDNDIRVGLWYAITFTAGQPTFTLIKERVKRADPVVMAY 301

Query: 245  DIETTKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKV 304
            DIETTK PLKFPD   D +MMISYM+DGQGYLI+NRE V EDIED EYTPK  +EG F V
Sbjct: 302  DIETTKAPLKFPDQAIDQVMMISYMVDGQGYLIVNREIVSEDIEDFEYTPKEGYEGPFIV 361

Query: 305  TNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDKN 364
             N  NE   ++ WF+H+QEVKP I  T+NGD+FD PF++ RA  +G  M  E GF  D  
Sbjct: 362  YNEPNEEATIKRWFSHIQEVKPTIMATFNGDFFDMPFIDARAKVNGLDMFLETGFAIDAE 421

Query: 365  QGECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQ 424
            + E +++   H+DCF WVKRDSYLPQGSQGLKAVT AKLGY+P+E++PE M  +A E+PQ
Sbjct: 422  E-EYKSRTCVHMDCFRWVKRDSYLPQGSQGLKAVTTAKLGYNPIELDPELMTPYAVEQPQ 480

Query: 425  MMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKAN 484
            ++A YSVSDAVATYYLYM YVHPFIFSL  II ++PDEVLRKGSGTLCE LLMV+AY+++
Sbjct: 481  VLAQYSVSDAVATYYLYMKYVHPFIFSLCNIIALNPDEVLRKGSGTLCETLLMVEAYRSH 540

Query: 485  VICPNKHQSDPEKFYRNHLLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYE----QL 540
            +I PNKH+      Y  HLL SETY+GGHVE LE+GVFRSD+ T FK+ P A      +L
Sbjct: 541  IIMPNKHEETHGNMYEGHLLSSETYVGGHVEALEAGVFRSDIATDFKVVPEALTFVSLKL 600

Query: 541  LNNLDRDLQYAIKVEGKMDLESVSNYDEVKNAIMEKLLRLQEEPIREECPLIYHLDVAAM 600
            +++LD  L + I  E K +L  V+NY+EVK  I +KL  +++ P R + PLIYHLDVAAM
Sbjct: 601  IDDLDAALTFCIVEESKANLADVTNYEEVKREIQDKLELMRDNPKRVDNPLIYHLDVAAM 660

Query: 601  YPNIILTNRLQPPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYYHLKKQI 660
            YPNI+L+NRLQP S+V +  C  CDFNRPGKTC R+L+W WRGE F   R ++  +K  +
Sbjct: 661  YPNIMLSNRLQPDSMVQESDCAVCDFNRPGKTCDRRLQWAWRGEYFPAHRDEFNMIKHAL 720

Query: 661  ESEFVDGTNGH-LSKSFLDLPKMEQQSRLKDRLKKYCQKAYKRVLDKPVTELREAGICMR 719
              E   G   H   + F DL   EQ + L  RL  Y +K Y +  +  V E R + +C R
Sbjct: 721  NQESFPGKRAHDPPRRFTDLSPAEQTALLHKRLGDYSRKVYSKTKETKV-ETRTSIVCQR 779

Query: 720  ENSFYVDTVRSFRDRRYEYKGLNKVWKGKLSEAKASGNSI-KIQEAQDMVVLYDSLQLAH 778
            EN FYVDTVR FRDRRYEYKGL+K WK  L    A   SI ++ EA+ M+VLYDSLQLAH
Sbjct: 780  ENPFYVDTVRRFRDRRYEYKGLHKKWKNNLDTYLAEARSIAEVDEAKKMIVLYDSLQLAH 839

Query: 779  KCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVL 838
            KCILNSFYGYVMRKGARW+SMEMAG+   TGA IIQ AR L+E+IG+PLELDTDGIWC+L
Sbjct: 840  KCILNSFYGYVMRKGARWHSMEMAGITCLTGATIIQMARALVEQIGRPLELDTDGIWCML 899

Query: 839  PGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSI 898
            PG FPENF F  K+  K +  SYPC MLN  V    TN QY  L +P +  YE HSE SI
Sbjct: 900  PGVFPENFKFNLKN-GKSIKFSYPCTMLNHLVHDKFTNHQYHDL-NPETGEYEVHSENSI 957

Query: 899  EFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAEL 958
             FE+DGPYKAMILP+SKEE  L+KKRYAVFNDDG+LAELKGFE+KRRGEL+LIK+FQ+++
Sbjct: 958  FFELDGPYKAMILPSSKEEDKLLKKRYAVFNDDGSLAELKGFEVKRRGELQLIKIFQSQI 1017

Query: 959  FDKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLADYGEQ 1018
            F+KFL G+T++ECY+AVA VA++WLD+L  +G+ ++D EL+D I+E+ +MSK+LA+YG Q
Sbjct: 1018 FEKFLLGTTLQECYAAVAEVADQWLDILYTRGETLSDEELVDLIAENRSMSKTLAEYGGQ 1077

Query: 1019 KSCAVTTARRLSDFLGDTMVKDKGLRCQYIVACEPQGTPVSERAVPVAIFETDAEIMKFY 1078
            KS +++TARRL++FLGD MVKDKGL C++I++ +P G+PV++RAVPVAIF  +  + + Y
Sbjct: 1078 KSTSISTARRLAEFLGDQMVKDKGLACKFIISAKPIGSPVTDRAVPVAIFSAEDSVKRTY 1137

Query: 1079 LRKWCKTSS--DVGIRSIVDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLYK 1136
            LRKW K SS  +  +R+I+DW YY +RL S IQK+ITIPAAMQKV+NPVPR+ HPDWL++
Sbjct: 1138 LRKWLKDSSLNNFDLRAILDWDYYIERLGSVIQKLITIPAAMQKVANPVPRIRHPDWLFR 1197

Query: 1137 KVREKEDKFRQRKLVDIFSSLKKDDFLNKTCNAETNLMDENVEDLEDFPKKRRNSVNGPR 1196
            +V  + DKF+Q K+ D F          K  NA     D+++EDL D           P+
Sbjct: 1198 RVAAQGDKFKQNKMTDFFKV--------KDPNAPPE--DKDMEDLAD-----------PK 1236

Query: 1197 PIVRCFEVNNEQKTVKTTDQVDSLRQQLEPSEVSDQQPSSQNAIDTEN---IDRIVDYKG 1253
            P                       R +L P E   + P  +   + +     D   +Y  
Sbjct: 1237 PN----------------------RLRLVPKEPKPKAPEPEVETEEDEGPMPDPTRNYSA 1274

Query: 1254 WLELKKRKWKDNLDRRKKQKLGSLRASHQANGVSESLGDMINHKEAQRRTGVGSYFRRQE 1313
            W++  + KWK  +  R      S+  S   + V+                       R +
Sbjct: 1275 WIKRMRPKWKAKIQARWTDPESSVVPSMFQSAVA-----------------------RAK 1311

Query: 1314 TAMTRCHWQIIQLVPSSQSGVFLAWVVVEGIMVRIPITVPRLFYLNSKDPIVEKF----- 1368
               TR  W I+Q+  S   G FL WV V+  +V IP+ +PR FY++ K P+ + F     
Sbjct: 1312 PVSTR--WDILQIRASKIPGRFLLWVYVDAKLVSIPLRIPREFYVHLKKPMPQLFRPEFY 1369

Query: 1369 PGRRVNKTLPHGRRSFNLIEVMIDEDQFRKESKKLAALLADPEVE 1413
               +V K LPH     NL ++ + ED ++   +    L  DP V+
Sbjct: 1370 SVEKVTKNLPHDLPCTNLFKISVREDVYQDIQEHFIDLTNDPNVD 1414



 Score =  286 bits (733), Expect = 7e-74,   Method: Compositional matrix adjust.
 Identities = 185/622 (29%), Positives = 316/622 (50%), Gaps = 61/622 (9%)

Query: 1415 LGWQQNAAKIGMQRCAASSQWFNERISLARY-----AHI--------------------- 1448
            L WQ  A    ++R  A   W +  I+LA Y      HI                     
Sbjct: 1614 LPWQSTAGVKILKRYLALGPWLDRMIALADYYDVPIGHIEGDTPLLLSDITYARRLIHQD 1673

Query: 1449 --LWISDDGVPDLGGTSEEDECFADEVHQPVLTYPGAYRKVSVELKIHHLSVNALLKSNQ 1506
              LW S   +PDLGG   + +   D      L+ PG Y  V +E+ + +L+VN++L+S  
Sbjct: 1674 TVLWWSPSDLPDLGGIEADIQALEDWPRTDFLS-PGVYSNVCLEVTVRNLAVNSVLQSVV 1732

Query: 1507 VNEMEG-GGLFGFDQ------DMNSGPYNNELCGFDETTSSAPAFRVVKQLIQRCLTDAV 1559
            +NE+EG GG   FD       D  SG    ++     +  S  AF ++K +++  L D +
Sbjct: 1733 INELEGSGGTTAFDSVSHTLDDYKSGDSQRDIT-LGGSRVSTHAFSILKNMLKGWLLDKI 1791

Query: 1560 T-SGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEFRKLGATIIFA 1618
                N  A   L H +RW+ S  S+L+DP LHR +H +M+K F  LLAEF++LG+ +++A
Sbjct: 1792 QHENNSPACLALDHFWRWVTSKGSQLYDPSLHRFIHGLMRKTFIQLLAEFKRLGSHVVYA 1851

Query: 1619 NFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLFMDQYNYGGIP 1678
            +FS +++ T K     A AY   +  A+ + ELF+ I L    F+  L+ MD+ N GG+ 
Sbjct: 1852 DFSTILLATSK-PPGTAHAYATYITTAVTSHELFQHIYLHTEKFYDFLICMDRANMGGVV 1910

Query: 1679 ARADESLDDDSQVDIVSSWNIAEYLPKEIQDHFVLVVSEFMYIPWKHAQKLAASRASLQE 1738
                 +++  +++ +  +WNI  +LP  IQ  F  VV  ++   ++  QK+ AS   +  
Sbjct: 1911 CEDPLAVEPPAELAVEMNWNIQHFLPPAIQHDFGSVVQYYIVELYRIRQKINASSRPIIR 1970

Query: 1739 G--SSCTPSITVAAAENFESH---IVQYVKGEISSYFTGKLLSIVRDAIHHMKKMNNDQH 1793
               +S  P  T  AA+  +S    IV +    I+  FT KLL ++  +++  ++ +    
Sbjct: 1971 PMLTSDGPDATQRAAQANDSEKSMIVDF----IARKFTRKLLKVI-GSVYERQQDDAMSP 2025

Query: 1794 NSPGVMQ----TAANIHKVDAPLEFIKHVCAAFALDQNVQHDVLVMRKNLLKYVRVREFA 1849
             S G  +      +++H     LE IK +CA F+L ++   ++ ++++NLL+ + VREFA
Sbjct: 2026 ESDGSFEFPTLPGSHLHMTHPTLELIKFLCAVFSLAKDYTVEIGLLKRNLLELINVREFA 2085

Query: 1850 PEAEFRDPCPSFILPNVICSYCNDCRDLDLCRDMALLAQD------WHCAMPQCGQPYDR 1903
             EA +R+PC    L NV C +C+  RD D CRD++LL  +      W C    C   YD+
Sbjct: 2086 QEAIYRNPCEPLKLSNVPCRHCDLLRDFDFCRDLSLLPNNTDVNPRWLCT--NCNGEYDK 2143

Query: 1904 EVMENALLQIVRQRERLYHLQDLVCIRCNQVKAAHLAEQCACAGSFRCKEDASDFRSKMQ 1963
             V+E +L+ + +  E+ +  QDL C +C Q+++ +++  C C+G+++   + ++ +  ++
Sbjct: 2144 TVIEFSLIDMTKSIEQKFARQDLRCSKCQQIQSDNVSRYCQCSGTYQYTLNKAEAKKTLK 2203

Query: 1964 IFLNIANRQGFQLLQECTSWIL 1985
              +NIA       L+E    +L
Sbjct: 2204 TMVNIAREYKLARLRETAQTLL 2225


>gi|410079182|ref|XP_003957172.1| hypothetical protein KAFR_0D03890 [Kazachstania africana CBS 2517]
 gi|372463757|emb|CCF58037.1| hypothetical protein KAFR_0D03890 [Kazachstania africana CBS 2517]
          Length = 2205

 Score = 1337 bits (3460), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 700/1419 (49%), Positives = 929/1419 (65%), Gaps = 92/1419 (6%)

Query: 21   RSAEEELEAKLGYDLFSEGDKRLGWLLTFASSSLEDEDT-----RKVYSCIDLYFVSQDG 75
            R    +   K+  D  S+   R+GWL+    + + +E T      K  + ID YF+ ++G
Sbjct: 54   RYTPPQFNGKVDVDNISQVPGRVGWLINIHPTMISNESTANSGSNKGVAGIDCYFLDEEG 113

Query: 76   STFKSKYKFRPYFY-AATKEKMEMDVEAYLRRRYESQIADIEILEKEDLDLKNHLSGLHK 134
             +FKS   F PYF+ A   + M  +VE +L++  ES +  I+I++K+DL L NHL GL +
Sbjct: 114  GSFKSSIVFDPYFFIAVNDDSMVNEVEEFLKKYLESCLKSIDIIQKDDLALDNHLLGLKR 173

Query: 135  SYLKISFDTVQQLMDVKKDLLHVVERNQAKFDAAEAYESILTGKREQRPQDFLDCIVDLR 194
            + +K+SF     L + +K L  ++  NQ        Y+      R+   Q    CI D+R
Sbjct: 174  TLIKLSFINSNHLFEARKLLRPILLDNQNNNTQRNVYKKAQANVRKDAKQ----CIEDIR 229

Query: 195  EYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLLEKRVDLLQRAEVHVCAFDIETTKLPLK 254
            EYDVPYH+R +ID ++R G+WY VS +      EK    +  A+  V AFDIETTK PLK
Sbjct: 230  EYDVPYHVRVSIDKNIRVGKWYKVSSAGFLECTEK----VAFADPVVLAFDIETTKPPLK 285

Query: 255  FPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNVNNEIELL 314
            FPDA  D IMMISYM+DG+GYLI NRE + EDIED EYTPKPE+ G F + N  +E+ LL
Sbjct: 286  FPDAAVDQIMMISYMIDGEGYLITNREIISEDIEDFEYTPKPEYHGQFSIFNEADELALL 345

Query: 315  RLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDKNQGECRAKFAC 374
            + +F H+++V+P +  T+NGD+FDWPF+ETRA  HG  M +E+GF  D ++GE ++ +  
Sbjct: 346  QRFFEHIRDVRPTVIATFNGDFFDWPFVETRAKIHGLDMFDEIGFAPD-SEGEYKSSYCS 404

Query: 375  HLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQMMASYSVSDA 434
            H+DC+ WVKRDSYLPQGSQGLKAVT+AKLGY+P+E++PE M  +A EKPQ ++ YSVSDA
Sbjct: 405  HMDCYRWVKRDSYLPQGSQGLKAVTQAKLGYNPIELDPELMTPYAYEKPQHLSEYSVSDA 464

Query: 435  VATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVICPNKHQSD 494
            VATYYLYM YVHPFIFSL TIIP++PDEVLRKG+GTLCEMLLMVQAY   ++ PNKH   
Sbjct: 465  VATYYLYMKYVHPFIFSLCTIIPLNPDEVLRKGTGTLCEMLLMVQAYDHGILLPNKHTDP 524

Query: 495  PEKFYRNHLLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQLLNNLDRDLQYAIKV 554
             E+FY  HLLE+ETY+GGHVE LE+GVFRSD+   F +DP+  + LL +L   L++ I+ 
Sbjct: 525  LERFYDGHLLETETYVGGHVESLEAGVFRSDIKNHFSVDPATIDDLLEDLPHALKFCIET 584

Query: 555  EGKMDLESVSNYDEVKNAIMEKLLRLQEEPIREECPLIYHLDVAAMYPNIILTNRLQPPS 614
            E K  ++ V N+DE+K+ I E+LL L+    R E PLIYH+DVA+MYPNI+ TNRLQP S
Sbjct: 585  ENKSSVDKVMNFDEIKDKITEQLLDLKNNVKRYELPLIYHVDVASMYPNIMATNRLQPDS 644

Query: 615  IVTDEVCTACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYYHLKKQIESEFVDGTNGHLSK 674
            I T+  C +CDFNRPG TC RKL+W WRGE F  K  +Y  +K+ +++E     N +  K
Sbjct: 645  IKTERDCASCDFNRPGSTCQRKLKWAWRGEFFPAKMDEYNMIKRALQNETFPNKNKYSKK 704

Query: 675  ---SFLDLPKMEQQSRLKDRLKKYCQKAYKRVLDKPVTELREAGICMRENSFYVDTVRSF 731
               SF +L   +Q   +K RL +YC+K Y RV    V E REA +C REN FYV+TVRSF
Sbjct: 705  PYLSFDELSYSDQVQHIKKRLTEYCKKVYHRVKVSEVVE-REAIVCQRENPFYVNTVRSF 763

Query: 732  RDRRYEYKGLNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHKCILNSFYGYVMR 791
            RDRRYE+KGL K WKGK+S   +S    K  EA+ MVVLYDSLQLAHK ILNSFYGYVMR
Sbjct: 764  RDRRYEFKGLAKTWKGKVSAIDSSDKHAK-DEAKKMVVLYDSLQLAHKVILNSFYGYVMR 822

Query: 792  KGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLPGSFPENFTFKTK 851
            KG+RWYSMEMAG+   TGA IIQ AR ++EKIG+PLELDTDGIWC+LP SFPENF F+  
Sbjct: 823  KGSRWYSMEMAGITCLTGATIIQMARSVVEKIGRPLELDTDGIWCILPKSFPENFFFQL- 881

Query: 852  DLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEFEVDGPYKAMIL 911
            D  KKL +SYPC MLN  V +  TN QYQTL DP+   YETHSE SI FEVDGPYKAMIL
Sbjct: 882  DNGKKLFLSYPCSMLNYKVHQKFTNHQYQTLSDPLKHKYETHSENSIFFEVDGPYKAMIL 941

Query: 912  PASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFLHGSTIEEC 971
            P SKEEG  IKKRYAVFN+DGTLAELKGFE+KRRGEL+LIK FQ+++F  FL G+++E C
Sbjct: 942  PTSKEEGKGIKKRYAVFNEDGTLAELKGFELKRRGELQLIKNFQSDIFKVFLEGNSLESC 1001

Query: 972  YSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLADYGEQKSCAVTTARRLSD 1031
            Y+AVA VANRWLD+LD  G  + D +LID I E+ +MSK+L +Y  QKS ++TTA+RL +
Sbjct: 1002 YTAVANVANRWLDVLDTHGAMLEDEDLIDLICENRSMSKTLKEYEGQKSTSITTAKRLGE 1061

Query: 1032 FLGDTMVKDKGLRCQYIVACEPQGTPVSERAVPVAIFETDAEIMKFYLRKWCKTSS--DV 1089
            FLG+ MVKDKGL+C+YI++  P G PV+ERA+PVAIF TD  + + +LR+W    +  D 
Sbjct: 1062 FLGEDMVKDKGLQCKYIISNRPVGAPVTERAIPVAIFSTDISVKRGFLRRWLSDPNLDDF 1121

Query: 1090 GIRSIVDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLYKKVREKEDKFRQRK 1149
             IR I+DW+YY++RL+S IQKIITIPAA+Q V NPVPR+ HPDWL KK+  +EDKF+Q  
Sbjct: 1122 DIRGIIDWAYYRERLASTIQKIITIPAALQNVPNPVPRIEHPDWLRKKILIREDKFKQTS 1181

Query: 1150 LVDIFSSLKKDDFLNKTCNAETNLMDENVEDLEDFPKKRRNSVNGPRPIVRCFEVNNEQK 1209
            L         + F +KT  A  +   +++EDL                    F+ ++E K
Sbjct: 1182 L---------NKFFSKTSKAPKSGKVKDIEDL--------------------FKEDDEMK 1212

Query: 1210 TVK---TTDQVDSLRQQLEPSEVSDQQ---PSSQNAIDTENIDRIVDYKGWLELKKRKWK 1263
             +K   TT +    +++    E+ +Q    PS+  +ID        DY  WL  +K KWK
Sbjct: 1213 KLKIARTTIKAKQNKKRKSMKEIEEQHLALPSNVPSIDG-------DYAEWLNYQKIKWK 1265

Query: 1264 DNLDRRKKQKLGSLRASHQANGVSESLGDMINHKEAQRRTGVGSYFRRQETAMTRCHWQI 1323
              + +R +Q+   L                 N + +  RT +GS  R+Q  +    +W+I
Sbjct: 1266 --IQQRDRQRRTQLFG---------------NSENSNERTALGSMIRKQAESYADANWEI 1308

Query: 1324 IQLVPSSQSGVFLAWVVVEGIMVRIPITVPRLFYLNSKD---PI--VEKFPGRRVNKTLP 1378
            IQ   SS  GV   ++ + G +  +   VP+  Y+  K    P+  ++     +VN TLP
Sbjct: 1309 IQYKQSSDPGVLDVYMYIHGKIQLLKFKVPKTVYIKFKTDAVPLGKIKHSQIEKVNVTLP 1368

Query: 1379 HGRR-----SFNLIEVMIDEDQFRKESKKLAALLADPEV 1412
            +  +     S N+  + + E  + +E +   ++L D  V
Sbjct: 1369 NNPKLKDSSSHNIFRLTLPEASYMEEIENNMSILNDDNV 1407



 Score =  206 bits (524), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 141/551 (25%), Positives = 263/551 (47%), Gaps = 26/551 (4%)

Query: 1448 ILWISDDG-VPDLGGTSEEDECFADEV----HQPVLTYPGAYRKVSVELKIHHLSVNALL 1502
            +LW ++D  +PD  G  ++ +  AD +    +   +  P  Y  V +++ + +L+VN +L
Sbjct: 1670 VLWWNEDSPLPDHAGVEKDFDPNADWIINGSNFSEINTPDIYDNVVLDISVGNLTVNTIL 1729

Query: 1503 KSNQVNEMEGGGLF--GFDQDMNSGPYNNELCGFDETTSSAPAFRVVKQLIQRCLTDAVT 1560
             S  +NE EG  L   G+D    +G        F +   S     V+K +++    +A+ 
Sbjct: 1730 GSTLINEAEGSDLANGGYDTFQGAGSSTE----FVQDAFSEQGLSVLKNMLKDWWDEAL- 1784

Query: 1561 SGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEFRKLGATIIFANF 1620
            S N+ AD ++     W+ SP S L D  L   +  + +K    L+ EF  LG+ +++A+ 
Sbjct: 1785 SENLTADLLVNSFINWVQSPDSGLFDGSLRYHVQNLTKKSMLQLMNEFDTLGSFVLYADR 1844

Query: 1621 SKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLFMDQYNYGGIP-A 1679
            +++++ T KF   +  AY    ++A++   +F +I+L+   +W  L++MD++NY G+   
Sbjct: 1845 NRLLVKTNKFSPGSCYAYSQYTIRAIKANPIFRYIDLKINRYWDVLIWMDKWNYSGLACT 1904

Query: 1680 RADESLDDDSQVDIVSSWNIAEYLPKEIQDHFVLVVSEFMYIPWKHAQKLAASRASLQEG 1739
               + +D D   D  S W I + LP   Q  F   +S  +    K  +K  AS    Q  
Sbjct: 1905 EIQDKVDQD--FDAYSEWQIKKALPTIFQSEFDDWMSIILDSMIKTKEKYMASHLGTQRA 1962

Query: 1740 SSCTPSITVAAAENFESHIVQYVKGEISSYFTGKLLSIVRDAIHHMKKMNNDQHNSP--G 1797
            +   P+ T   A + E   +  + G  +  F   L+  ++    + ++   D   S    
Sbjct: 1963 TQILPASTAGKANSEE---ISSISG-FTENFGTSLMKRMKKLFRNQQEFILDPEFSSDYA 2018

Query: 1798 VMQTAANIHKVDAP-LEFIKHVCAAFALDQNVQHDVLVMRKNLLKYVRVREFAPEAEFRD 1856
              +   +  ++  P LE +K +C    L Q    +   +RK LLK   +REFA  +EF+D
Sbjct: 2019 FPELPGSYLEMKNPLLELVKCLCQVMLLSQKTLLEARELRKELLKIFEIREFAKISEFKD 2078

Query: 1857 PCPSFILPNVICSYCNDCRDLDLCRDMALLAQDWHCAMPQCGQPYDREVMENALLQIVRQ 1916
            P  S  +   IC YC+   D+DLC+D     + + C  P C + +++ +++  L++ +  
Sbjct: 2079 PSLSMPINGFICEYCSYVSDIDLCKDSP--EKIFSC--PHCPKAFNKLILQEHLIKKIVS 2134

Query: 1917 RERLYHLQDLVCIRCNQVKAAHLAEQCACAGSFRCKEDASDFRSKMQIFLNIANRQGFQL 1976
            +   Y+ QDL C +C ++K  +++  C C+GS+       +F   +Q +  +A    F +
Sbjct: 2135 QFEAYYTQDLKCTKCKKIKEDYMSAHCNCSGSWEGVISDRNFLQDIQTYKQVARYYDFDM 2194

Query: 1977 LQECTSWILEV 1987
            L  C S + +V
Sbjct: 2195 LNSCISELCKV 2205


>gi|189238915|ref|XP_969200.2| PREDICTED: similar to DNA polymerase epsilon CG6768-PA [Tribolium
            castaneum]
          Length = 2185

 Score = 1337 bits (3459), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 692/1430 (48%), Positives = 947/1430 (66%), Gaps = 76/1430 (5%)

Query: 6    WDRQDGRRTKKQKLIRSAEEELEAKLGYDLFSEGDKRLGWLLTFASSSLEDEDTRKVYSC 65
            + R++    + +++I +  + ++AK G++   +  +R G+LL   +S + DED R V + 
Sbjct: 23   FSREETSEVRLRQVIEN--DAIDAKYGFERVRDNLERTGFLLNMHASEILDEDKRLV-AA 79

Query: 66   IDLYFVSQDGSTFKSKYKFRPYFYAATKEKMEMDVEAYLRRRYESQIADIEILEKEDLDL 125
            +D YF+ +DG+ FK  Y + PYFY  TK ++  +V  +L +++   I  IE++ KEDLDL
Sbjct: 80   VDFYFMEEDGARFKVSYCYMPYFYILTKIELIQEVSQFLTKKFSGTIGKIEVVTKEDLDL 139

Query: 126  KNHLSGLHKSYLKISFDTVQQLMDVKKDLLHVVERNQAKFDAAEAYESILT-------GK 178
             NHL GL + Y+K+SF     L+ V+K++L VV++N+ +  +   Y  +LT        +
Sbjct: 140  PNHLIGLQQKYIKLSFFNQTDLIKVRKEILKVVKKNKERESSNTYYTEMLTDILADKAAQ 199

Query: 179  REQRPQDFLDCIVDLREYDVPYHIRFAIDNDVRCGQWYDV---SISSTGPLLEKRVDLLQ 235
              +   D ++ I+D+REYDVPYH+R +ID  + CG WY V     ++  P++  R DL++
Sbjct: 200  TTKTNTDQMENILDIREYDVPYHVRVSIDLKIFCGLWYTVKCKGATTEPPVITLRPDLIE 259

Query: 236  RAEVHVCAFDIETTKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPK 295
            R E  V AFDIETTKLPLKFPDA  D IMMISYM+DGQG+LI NRE +  DIED EYTPK
Sbjct: 260  RPEPIVLAFDIETTKLPLKFPDAQTDQIMMISYMIDGQGFLITNREILSSDIEDFEYTPK 319

Query: 296  PEFEGYFKVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSE 355
            PEFEG F + N  NE+ L++ +F H+ +V+P ++VTYNGD+FDWPF+ETRAA +   M +
Sbjct: 320  PEFEGKFTIFNEPNELALIQKFFDHIMDVRPHVFVTYNGDFFDWPFVETRAAVYDLDMKQ 379

Query: 356  ELGFQCDKNQG-ECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPED 414
            E+GF  D+N    CR   A H+DC  WVKRDSYLP GS  LKAV KAKL YDP+E++PE+
Sbjct: 380  EIGFAKDRNDVYSCRP--AIHMDCLCWVKRDSYLPVGSHNLKAVAKAKLRYDPVELDPEE 437

Query: 415  MVRFAKEKPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEM 474
            M   A  +PQ++++YSVSDAVATYYLYM YVHPFIF+L TIIP  PDEVLRKGSGTLCE 
Sbjct: 438  MCPLAASQPQVLSNYSVSDAVATYYLYMQYVHPFIFALCTIIPCEPDEVLRKGSGTLCEA 497

Query: 475  LLMVQAYKANVICPNKHQSDPEKFYRN-HLLESETYIGGHVECLESGVFRSDLPTSFKLD 533
            LLMV+A+  N+I PNK ++   K   + H+L  ETY+GGHVE LESGVFR+D+P  F+L+
Sbjct: 498  LLMVEAFHCNIIFPNKEETVLNKLTDDGHVLHQETYVGGHVEALESGVFRADIPCRFRLE 557

Query: 534  PSAYEQLLNNLDRDLQYAIKVEGKMDLESVSNYDEVKNAIMEKLLRLQEEPIREECPLIY 593
              A  +L+  + + L +AI++E  + L  V+N +EV N I+ KL  L+E+P+R E PLIY
Sbjct: 558  TDALNKLIEQVPKTLAHAIEIEEGVPLTDVTNLEEVTNEIVAKLTSLKEQPMRLERPLIY 617

Query: 594  HLDVAAMYPNIILTNRLQPPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEIFMGKRSDY 653
            HLDV AMYPNIILTNRLQP +IV + +C ACD+N+ G  C R + W+WR E     R++Y
Sbjct: 618  HLDVGAMYPNIILTNRLQPCAIVDETICAACDYNKLGARCQRNMAWMWRAEYMPASRNEY 677

Query: 654  YHLKKQIESE-FVDGTNGHLSKSFLDLPKMEQQSRLKDRLKKYCQKAYKRVLDKPVTELR 712
            + +++Q+E+E F     G   ++F  L K EQ    K RL  YC+K YK+     + E R
Sbjct: 678  HRIQQQLETEKFPPQYPGGPQRAFHQLTKQEQADLEKKRLTVYCRKVYKKAKVTKIEE-R 736

Query: 713  EAGICMRENSFYVDTVRSFRDRRYEYKGLNKVWKGKLSEAKASGNSIKIQEAQDMVVLYD 772
               IC +ENSFYVDTVR+FRDRRYEYKGL+K  K  ++ A   G++ +I+ A++  VLYD
Sbjct: 737  TTTICQKENSFYVDTVRAFRDRRYEYKGLSKKAKQAVAAAIKGGDASEIKSAKNREVLYD 796

Query: 773  SLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTD 832
            SLQLAHKCILNSFYGYVMR+GARW+SMEMAG+V YTGA II  AR +IEK+G+PLELDTD
Sbjct: 797  SLQLAHKCILNSFYGYVMRRGARWHSMEMAGIVCYTGANIIMRAREIIEKVGRPLELDTD 856

Query: 833  GIWCVLPGSFPENFTFKTKDLKK-KLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYE 891
            GIWC+LP SFPENF  +T   KK K+ +SYP  +LN  V  + TNDQY  LVD  S  YE
Sbjct: 857  GIWCILPASFPENFVVRTNHEKKNKIVVSYPNAVLNAMVKEHFTNDQYHELVDAQSLKYE 916

Query: 892  THSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLI 951
              SE SI FEVDGPYKAM+LPASKEEG  +KKRYAVFN DGTLAELKGFE+KRRGEL+LI
Sbjct: 917  ERSENSIFFEVDGPYKAMVLPASKEEGKKLKKRYAVFNFDGTLAELKGFEVKRRGELQLI 976

Query: 952  KVFQAELFDKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKS 1011
            K FQ+ +F+ FL G T+E CY+AVA +A+ WLD+L + G+++ DSEL D ISE+ +MSK 
Sbjct: 977  KNFQSSVFEAFLKGDTLESCYAAVAQIADYWLDVLFSHGRNMPDSELFDLISENRSMSKK 1036

Query: 1012 LADYGEQKSCAVTTARRLSDFLGDTMVKDKGLRCQYIVACEPQGTPVSERAVPVAIFETD 1071
            L +YG QKS +++TA+RL++FLGD MVKD GL C+Y+++ +P G PV+ERA+P+AIF+++
Sbjct: 1037 LEEYGGQKSTSISTAKRLAEFLGDQMVKDAGLACKYVISKKPDGAPVTERAIPLAIFQSE 1096

Query: 1072 AEIMKFYLRKWCKTSS--DVGIRSIVDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVV 1129
              + ++YLRKW K +S  +V IR I+DW+YY +RL  AIQKIITIPAAMQ V NPVPRV 
Sbjct: 1097 VSVQRYYLRKWLKDNSINEVDIREILDWNYYIERLGGAIQKIITIPAAMQGVPNPVPRVR 1156

Query: 1130 HPDWLYKKVREKEDKFRQRKLVDIFSSLKKDDFLNKTCNAETNLMDENVEDLEDFPKKRR 1189
            HPDWL+KK+ EK D F+QR++ D+F++  K                + + D+EDF     
Sbjct: 1157 HPDWLHKKMLEKNDTFKQRRITDMFAACPK---------------PQTLPDIEDFGG--- 1198

Query: 1190 NSVNGPRPIVRCFEVNNEQKTVKTTDQVDSLRQQLEPS--EVSDQQPSSQNAIDTENIDR 1247
             S    RPIV          T+K     D   + L  +  EV    P      +      
Sbjct: 1199 TSSTDKRPIV---------TTIKRKRDSDKESEDLSKTWREVMGNPPPYGTTKE------ 1243

Query: 1248 IVDYKGWLELKKRKWKDNLDRRKKQKLGSLRASHQANGVSESLGDMINHKEAQRRTGVGS 1307
              ++  W+  +KRKW     +R +      +A   A+ +  ++            TG  S
Sbjct: 1244 --EHLAWITFQKRKWLFQAMQRAQGTRNRKKAKSSASVLRSTV------------TGTLS 1289

Query: 1308 YF--RRQETAMTRCHWQIIQLVPSSQSGVFLAWVVVEGIMVRIPITVPRLFYLNSKDPIV 1365
             F  + Q+T +T   WQ+IQ+ P+  +G +  W ++   + +I + VPR+FY N K+  V
Sbjct: 1290 GFLQKAQKTLLT-VPWQVIQVAPTPVAGEYKLWALILNELHQIKLVVPRIFYANLKESKV 1348

Query: 1366 --EKFPGRRVNKTLPHGRRSFNLIEVMIDEDQFRKESKKLAALLADPEVE 1413
              E    ++ N+TLP  R+ +NL    + E+ F++  +KL     DP VE
Sbjct: 1349 VEEGALFKKCNRTLPRTRQVYNLYMYSVPEEVFQEHGRKLYLDQTDPNVE 1398



 Score =  289 bits (739), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 178/566 (31%), Positives = 285/566 (50%), Gaps = 49/566 (8%)

Query: 1442 LARYAHILWISDDGVPDLGGTSEEDECFADEVHQ---PVLTYPGAYRKVSVELKIHHLSV 1498
            L ++ H+LW S    PDLGG  E D     E  +    V   PG Y  V +EL +  L++
Sbjct: 1648 LTKHNHVLWCSPTDKPDLGGVEENDSRLLAENQEGSSEVCNVPGWYSSVCIELDVDCLAI 1707

Query: 1499 NALLKSNQVNEMEGG---------GLFGFDQDMNSGPYNNELCGFDETTSSAPAFRVVKQ 1549
            N LL+S+ V ++EG          G    D  +   P       +DET   A AF++++ 
Sbjct: 1708 NTLLQSHHVTDIEGTSSATAFDGVGATSLDDLVGDNP-----TVYDETARCAEAFKILRT 1762

Query: 1550 LIQRCLTDAVTSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEFR 1609
            +    + D     N+FAD  + H YRWL +P + L+DP L R L  +M+K+F  L+AEF+
Sbjct: 1763 MASIWMRDISLYQNIFADFQVVHFYRWLRAPKALLYDPALLRTLQNLMKKLFLQLVAEFK 1822

Query: 1610 KLGATIIFANFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLFM 1669
            +LG TII+ANF+K++I + K  +  A    + ++ +++ +ELF  +++     W +L+++
Sbjct: 1823 RLGCTIIYANFNKIVICSKKKSVEDAMENVEFVVTSIRNKELFHSLDISFRQCWETLVWL 1882

Query: 1670 DQYNYGGIPARADESL------DDDSQVDIVSSWNIAEYLPKE--IQDHFVLVVSEFMYI 1721
            D  NY G+  +  E L      ++  Q +IV SWN+A+ LP+    + +F  V++   YI
Sbjct: 1883 DPANYAGVQGKLPEDLREEGNEEEKGQSNIVMSWNLAQRLPEAGGCRTNFSAVIAG--YI 1940

Query: 1722 PWKHAQKLAASRASLQEGSSCTPSITVAAAENFESHIVQYVKGEISSYFTGKLLSIVRDA 1781
                 +      +++    S  P+  + A E+    + QY K  +S   T +L  I    
Sbjct: 1941 NATFTKMKETENSTIARAVSSQPTFGIGANED----VRQYAKEILSGEITQELFQITERI 1996

Query: 1782 IHHMKKMNNDQHNSPGVMQTAANIHKVDAPLEFIKHVCAAFALDQNVQHDVLVMRKNLLK 1841
             + +K + +    SP               LEF+K VC    LD  ++  V  ++ NLL+
Sbjct: 1997 NNRLKPLPDG--TSPA--------------LEFVKAVCQVLGLDAALKDTVSHLKANLLR 2040

Query: 1842 YVRVREFAPEAEFRDPCPSFILPNVICSYCNDCRDLDLCRDMALLAQDWHCAMPQCGQPY 1901
             V V EF+ +AE+RD   S+++P VIC  CN CRD+DL RD       W C  P C   Y
Sbjct: 2041 LVGVGEFSEKAEWRDTSVSYVIPQVICKSCNHCRDIDLGRDTHRSEAAWVC--PLCDFAY 2098

Query: 1902 DREVMENALLQIVRQRERLYHLQDLVCIRCNQVKAAHLAEQCACAGSFRCKEDASDFRSK 1961
            D   +E  LL  + ++   Y+LQDL C +C Q+K  +L   C CAG F+C    S+    
Sbjct: 2099 DNGEIELFLLDTINRKFLAYNLQDLQCKKCAQIKLENLVFHCQCAGDFKCLISRSELVKL 2158

Query: 1962 MQIFLNIANRQGFQLLQECTSWILEV 1987
            ++ F  +A+      L+E T  IL++
Sbjct: 2159 IETFHLLADTFNMSALRENTEQILKL 2184


>gi|322700202|gb|EFY91958.1| DNA polymerase epsilon [Metarhizium acridum CQMa 102]
          Length = 2212

 Score = 1336 bits (3458), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 687/1414 (48%), Positives = 928/1414 (65%), Gaps = 70/1414 (4%)

Query: 25   EELEAKLGYDLFSEGDKRLGWLLTFASSSLEDEDTRKVYSCIDLYFVSQDGSTFKSKYKF 84
            + ++   G+  +  G K+ GWL+    +++EDE      + +D YF+  DG+TFK+  ++
Sbjct: 51   QTIDENFGFGRYDSGKKKEGWLVNVQPTAIEDERNPGGRAALDCYFIEHDGATFKATVEY 110

Query: 85   RPYFYAATKEKMEMDVEAYLRR-RYESQIADIEILEKEDLDLKNHLSGLHKSYLKISFDT 143
             PYF  A K+  E +VE +++R   +  I  I  +EK+DL + NHL G  +++L++ F  
Sbjct: 111  DPYFLIAVKKGHESEVEEWIKRVPGDGCIKTIRRVEKDDLKMPNHLLGYRRTFLELKFAN 170

Query: 144  VQQLMDVKKDLLHVVERNQAKFDAAEAYESILTG-----------KREQRPQDFL----D 188
            V  LM  ++D++ V E+N+   +A +AY  ++T            + ++R  +      D
Sbjct: 171  VPDLMAARRDIMPVAEKNKKNMNAMDAYAEVVTANGNFDLFDDDLRTDERTSNSFAEASD 230

Query: 189  CIVDLREYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLLEKRVDLLQRAEVHVCAFDIET 248
             IVD+REYDVPYH+R  ID D+R G+WY V +      +    D    A+  V AFDIET
Sbjct: 231  YIVDIREYDVPYHVRVMIDLDIRVGKWYYVEVKHGVTKILPNEDRSLPADPVVLAFDIET 290

Query: 249  TKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNVN 308
            TKLPLKFPDA  D IMMISYM+DGQG+LI NRE + EDI D +YTPKPE+ G F + N  
Sbjct: 291  TKLPLKFPDAAIDQIMMISYMIDGQGFLITNREIISEDIGDFDYTPKPEYPGPFMIFNEP 350

Query: 309  NEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDKNQGEC 368
            NE  ++  +F H++E +P +  TYNGD+FDWPF+E RA+ +G  M +E+G++ D ++ + 
Sbjct: 351  NEKAVIERFFLHIKEARPTVIATYNGDFFDWPFVEARASVNGIDMYQEIGWKKD-SEDQF 409

Query: 369  RAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQMMAS 428
            +  +  H+DCF WV RDSYLPQGS+GLKAVT AKLGYDP E++PE M  +A E+PQ +A 
Sbjct: 410  KCNYGVHMDCFHWVNRDSYLPQGSRGLKAVTVAKLGYDPDELDPELMTPYASERPQTLAE 469

Query: 429  YSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVICP 488
            YSVSDAVATY+LYM YVHPFIFSL TI+P+  D+ LRKG+GTLCEMLLMVQAY+  ++ P
Sbjct: 470  YSVSDAVATYFLYMKYVHPFIFSLCTILPLGGDDTLRKGTGTLCEMLLMVQAYQKEIVLP 529

Query: 489  NKHQSDPEKFYRNHLLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQLLNNLDRDL 548
            NKHQS  E F+  HLL+SETY+GGHVE +E+GVFR+D+P  F +D  A ++LL ++D  L
Sbjct: 530  NKHQSPKEAFWDGHLLDSETYVGGHVESIEAGVFRADIPVDFAVDTGAIDELLRDIDAAL 589

Query: 549  QYAIKVEGKMDLESVSNYDEVKNAIMEKLLRLQEEPIREECPLIYHLDVAAMYPNIILTN 608
            ++ I VE K  L+ V NYDEVK  I+ KL++L+E P R E PLIYHLDVA+MYPNI+ TN
Sbjct: 590  KFVITVEEKKSLDDVENYDEVKEQIVAKLMKLKETPNRRERPLIYHLDVASMYPNIMTTN 649

Query: 609  RLQPPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYYHLKKQIESEFVDGT 668
            RLQP S++ +  C ACDFNRPGKTC R+L W WRGE    KR +Y  ++  +E+E   G 
Sbjct: 650  RLQPDSMIDESDCAACDFNRPGKTCDRRLPWAWRGEYLPAKRDEYNMIRHALENEKFPGK 709

Query: 669  NGHLS-KSFLDLPKMEQQSRLKDRLKKYCQKAYKRVLDKPVTELREAGICMRENSFYVDT 727
              H   ++F DL   EQ S ++ RL+ Y QK Y ++ D   T +REA IC REN FY++T
Sbjct: 710  TPHAPMRTFADLSADEQASLVRKRLQVYSQKVYHKIHDS-TTIVREAIICQRENPFYINT 768

Query: 728  VRSFRDRRYEYKGLNKVWKGKLSEAKASGNSI-KIQEAQDMVVLYDSLQLAHKCILNSFY 786
            VR FRDRRY+YKG  KVWKGK    K+SG S  ++  A+ M++LYDSLQLAHK ILNSFY
Sbjct: 769  VRDFRDRRYDYKGKAKVWKGKTESLKSSGASASEVDAAKKMIILYDSLQLAHKVILNSFY 828

Query: 787  GYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLPGSFPENF 846
            GYVMRKG+RWYSMEMAGV   TGA IIQ AR L+E++G+PLELDTDGIWC+LP +FPENF
Sbjct: 829  GYVMRKGSRWYSMEMAGVTCLTGATIIQLARQLVERLGRPLELDTDGIWCMLPATFPENF 888

Query: 847  TFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEFEVDGPY 906
             FK K+  KKL ISYPCVMLN  V    TN QYQTLVD  +  YETHSE SI FEVDGPY
Sbjct: 889  AFKLKN-GKKLPISYPCVMLNHLVHDKFTNHQYQTLVDQKTFKYETHSENSIFFEVDGPY 947

Query: 907  KAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFLHGS 966
            KAMILP SKEE   +KKRYAVFNDDG+LAELKGFE+KRRGELKLIK+FQ ++F  FL G 
Sbjct: 948  KAMILPTSKEEDKNLKKRYAVFNDDGSLAELKGFEVKRRGELKLIKIFQQQIFKFFLEGE 1007

Query: 967  TIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLADYGEQKSCAVTTA 1026
             + +CY AVA VANRWLD+L N+G  +AD EL++ ISE+ +MSK+L +YG QKS ++TTA
Sbjct: 1008 DLTQCYGAVAKVANRWLDVLHNKGSTLADEELMELISENRSMSKTLEEYGSQKSTSITTA 1067

Query: 1027 RRLSDFLGDTMVKDKGLRCQYIVACEPQGTPVSERAVPVAIFETDAEIMKFYLRKWCKTS 1086
            +RL+DFLG+ MVKDKGL C++I+   P+  PV+ERAVPVAIF  +  I + YL+KW K  
Sbjct: 1068 KRLADFLGEQMVKDKGLNCKFIICARPRNAPVTERAVPVAIFSAEESIKRTYLKKWLKEE 1127

Query: 1087 -SDVGIRSIVDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLYKKVREKEDKF 1145
             +D   R+++DW YY +RL S IQK+ITIPAA+QKV NPVPRV HPDWL +++  K+DK 
Sbjct: 1128 PADTDPRALLDWDYYLERLGSVIQKLITIPAALQKVRNPVPRVPHPDWLQRRINIKDDKM 1187

Query: 1146 RQRKLVDIFSSLKKDDFLNKTCNAETNLMDENVEDLEDFPKKRRNSVNGPRPIVRCFEVN 1205
            +Q+KL D+F+     D         TN+    +EDLEDF +K    +  P+ +      +
Sbjct: 1188 KQKKLTDLFTKEPLGDI--------TNINGSRMEDLEDFGRK----LLKPKQVSTAVASS 1235

Query: 1206 NEQKTVKTTDQVDSLRQQLEPSEVSDQQPSSQNAIDTENIDRIVDYKGWLELKKRKWKDN 1265
                TV+        R+  EP+E +D   +    + + +     +Y  +L+ +K+KWK  
Sbjct: 1236 QPALTVQK-------RKSPEPTENTDPMAALPKVMPSPS----ENYPAFLKYQKQKWKLQ 1284

Query: 1266 LDRR-KKQKLGSLRASHQANGVSESLGDMINHKEAQRRTGVGSYFRRQETAMTRCHWQII 1324
               R ++++L   R     N + +S                   F +Q        WQ++
Sbjct: 1285 KQARIRRRQLFGDRRGLTGNNIQQS-------------------FMKQAHITFMNTWQLL 1325

Query: 1325 QLVPSSQSGVFLAWVVVEGIMVRIPITVPRLFYLNSK-----DPIVEKFPGRRVNKTLPH 1379
             L  +   GV  A V+++  +  + + VPR  +LN K     D  +      +VN TLP+
Sbjct: 1326 HLQTTDSPGVVTAHVLIDAKIHTVKVNVPRQVFLNLKGSELPDVDIAGCEVEQVNYTLPN 1385

Query: 1380 GRRSFNLIEVMIDEDQFRKESKKLAALLADPEVE 1413
            G  S +L ++ + E  +  E+ K + L   P VE
Sbjct: 1386 GHPSSHLFKLTVPEGVYFSEAAKFSLLFNHPSVE 1419



 Score =  241 bits (615), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 171/618 (27%), Positives = 280/618 (45%), Gaps = 72/618 (11%)

Query: 1408 ADPEVEVLGWQQNAAKIGMQRCAASSQWFNERISLARYAHI------------------- 1448
             D  +  LGWQ   A+  +        W     +LARY  +                   
Sbjct: 1616 TDSSLPPLGWQAVVARRLVGHYLGLGSWILHLTALARYGDVPLCNLEREDPRFLIDIAYA 1675

Query: 1449 ---------LWISDDGVPDLGGTSEEDECFA--DEVHQPVLTYPGAYRKVSVELKIHHLS 1497
                     LW S    PD  G  E+D+     D V  P +  PG +  V ++L + +L+
Sbjct: 1676 RRLQANGVVLWWSAGPRPDHAGY-EKDDILGPLDTVKMPNVNNPGTFASVCIDLDVRNLA 1734

Query: 1498 VNALLKSNQVNEMEGGGLFGFDQDMNSGPYNNELCGFDETTSSAPAFRVVKQLIQRCLTD 1557
            +N +L S+ +NE+EG     F+   +            ET +S  AF     L+ R +  
Sbjct: 1735 INTILTSSLINELEGADSVSFNPSADGS----------ETLASDNAFANAGVLVLREMVK 1784

Query: 1558 A----VTSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEFRKLGA 1613
            A       G+  AD ++QHL RW+ +P S ++D  LH  +  + +K F  L+A+FR++G+
Sbjct: 1785 AWWAEACKGSTMADVLVQHLVRWVENPDSFMYDRALHYYVQMMSRKAFQQLMADFRRVGS 1844

Query: 1614 TIIFANFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLFMDQYN 1673
             ++FAN +++I+ T K ++  A AY   ++K+++++ LF +I+LE   +W  L++ D++N
Sbjct: 1845 QVVFANANRLILQTTKAEVGNAFAYSQYIIKSIKSKPLFHFIDLEIKEYWDYLVWYDEFN 1904

Query: 1674 YGGIPARADESLDDDSQ-VDIVSSWNIAEYLPKEIQDHFVLVVSEFMYIPWKHAQKLAAS 1732
            YGG      E ++ + Q ++ +  W +A +LP  +Q  F   V  F+ +   H  K  AS
Sbjct: 1905 YGG--KGCQEVIEAEEQNLETIMHWQMATFLPVRLQPTFQEWVIAFIQL--MHNLKRPAS 1960

Query: 1733 RASLQEGSSCTPSITVAAAENFESHIVQYVKGEISSYFTGKLLSIV-----RDAIHHMKK 1787
                      TP +T     N E+   Q + G+       K ++ +     R+ +H    
Sbjct: 1961 -----NDPDSTPRLTQLPNRNDENGQGQIILGKAYEKPLKKAIASLISQQKRELLHPELA 2015

Query: 1788 MNNDQHNSPGVMQTAANIHKVDAP-LEFIKHVCAAFALDQNVQHDVLVMRKNLLKYVRVR 1846
             +    + PG   T        AP LE +K +    +LD+NV  +  ++RK LL    VR
Sbjct: 2016 EDYSFPSLPGSHLTPR------APVLELVKSLMQILSLDKNVTLEARLLRKELLALFDVR 2069

Query: 1847 EFAPEAEFRDPCPSFILPNVICSYCNDCRDLDLCRDMALLAQD---WHCAMPQCGQPYDR 1903
            EF+ E  F +P  S  L  + C  C   RDLDLCRD  L   D   W C+   CG  YDR
Sbjct: 2070 EFSKEGTFANPSESLKLVQISCDSCTLARDLDLCRDEDLQGSDGRGWQCSF--CGTEYDR 2127

Query: 1904 EVMENALLQIVRQRERLYHLQDLVCIRCNQVKAAHLAEQCACAGSFRCKEDASDFRSKMQ 1963
              +E  LL +V      +  QDL C RC  ++   L E C C+G ++      +   K+ 
Sbjct: 2128 VTIEERLLSMVEAWTVEWATQDLKCSRCGALRVNDLMEHCTCSGEWKEIVSRQETMRKLT 2187

Query: 1964 IFLNIANRQGFQLLQECT 1981
            +   +A     ++L +  
Sbjct: 2188 VMRRVAKYYSLRMLSDVV 2205


>gi|358394535|gb|EHK43928.1| hypothetical protein TRIATDRAFT_137902 [Trichoderma atroviride IMI
            206040]
          Length = 2217

 Score = 1335 bits (3456), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 692/1419 (48%), Positives = 931/1419 (65%), Gaps = 80/1419 (5%)

Query: 25   EELEAKLGYDLFSEGDKRLGWLLTFASSSLEDEDTRKVYSCIDLYFVSQDGSTFKSKYKF 84
            + ++ K+G+  +  G ++ GWL+    +S+EDE      + +D YF+  DGSTFK+  ++
Sbjct: 51   QSIDDKMGFARYESGKRKEGWLVNVQPTSIEDERIPGGRAALDCYFIELDGSTFKATVEY 110

Query: 85   RPYFYAATKEKMEMDVEAYLRRRYESQIA-DIEILEKEDLDLKNHLSGLHKSYLKISFDT 143
             PYF  A K+  E +VE +++R     +   +  +EKEDL + NHL G  ++++++ F  
Sbjct: 111  DPYFIIAVKKGRESEVEEWVKRVPGGGVVKSVRRMEKEDLSMPNHLMGYRRTFIELKFAN 170

Query: 144  VQQLMDVKKDLLHVVERNQAKFDAAEAYESI--LTGKREQRPQDFLD------------- 188
            V  LM  K+D++ + E+N+   +A +AY  +  ++G  +    D  D             
Sbjct: 171  VGDLMSAKRDIMPIAEKNRKNMNAMDAYAEVATMSGDFDLFDNDLRDDERNTSNSISEAS 230

Query: 189  -CIVDLREYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLLEKRVDLLQRAEVHVCAFDIE 247
              IVD+REYDVPYH+R  ID D+R G+WY V        +    D    A+  V A+DIE
Sbjct: 231  DFIVDIREYDVPYHVRVMIDLDIRAGKWYFVEAKHGVTKIIPNEDRSLPADPVVMAYDIE 290

Query: 248  TTKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNV 307
            T+KLPLKFPDA  D IMMISYM+DGQG+LI NRE + EDI D +YTPKPE+ G F + N 
Sbjct: 291  TSKLPLKFPDAATDQIMMISYMIDGQGFLITNREIISEDIGDFDYTPKPEYPGPFMIFNE 350

Query: 308  NNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDKNQGE 367
             +E  ++  +F H++E +P +  TYNGD+FDWPF+ETRA+ +G  M  E+G++ D ++ +
Sbjct: 351  PDEKAVIERFFLHIKEARPTVIATYNGDFFDWPFVETRASINGIDMYHEIGWKRD-SEDQ 409

Query: 368  CRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQMMA 427
             +  ++ H+DCF WV RDSYLPQGS+GLKAVT AKLGYDP E++PE M  +A+E+PQ +A
Sbjct: 410  FKCNYSVHMDCFHWVNRDSYLPQGSRGLKAVTVAKLGYDPDELDPELMTPYAQERPQTLA 469

Query: 428  SYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVIC 487
             YSVSDAVATYYLYM YVHPFIFSL TI+P+  D+VLRKG+GTLCEMLLMVQAY+  ++ 
Sbjct: 470  EYSVSDAVATYYLYMKYVHPFIFSLCTILPLGGDDVLRKGTGTLCEMLLMVQAYQKEIVL 529

Query: 488  PNKHQSDPEKFYRNHLLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQLLNNLDRD 547
            PNKH +  E F+  HLL+SETY+GGHVE +E+GVFRSD+P +F +DP A ++LL +LD  
Sbjct: 530  PNKHVTPKEAFWDGHLLDSETYVGGHVESIEAGVFRSDIPVNFAVDPGAVDELLRDLDNA 589

Query: 548  LQYAIKVEGKMDLESVSNYDEVKNAIMEKLLRLQEEPIREECPLIYHLDVAAMYPNIILT 607
            L + I VE    L+ V+NYDEVK  I  KL  L+E P R E PLIYHLDVA+MYPNI+ T
Sbjct: 590  LNFVITVEEHKSLDDVTNYDEVKQQIKSKLEALKETPNRNERPLIYHLDVASMYPNIMTT 649

Query: 608  NRLQPPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYYHLKKQIESEFVDG 667
            NRLQP S++++  C ACDFNRPGKTC R+L W WRGE    KR +Y  ++  +E+E   G
Sbjct: 650  NRLQPDSMISESDCAACDFNRPGKTCDRRLPWAWRGEYIPAKRDEYNMIRHALENEKFPG 709

Query: 668  TNGHL-SKSFLDLPKMEQQSRLKDRLKKYCQKAYKRVLDKPVTELREAGICMRENSFYVD 726
               +   ++F DL   EQ + ++ RL+ Y QK Y ++ D   T +REA IC REN FY++
Sbjct: 710  KTPYAPPRAFQDLSTDEQATLVRKRLQLYSQKVYHKIHDS-TTIVREAIICQRENPFYIN 768

Query: 727  TVRSFRDRRYEYKGLNKVWKGKLSEAKASGN-SIKIQEAQDMVVLYDSLQLAHKCILNSF 785
            TVR FRDRRY+YKG  KVWKGK    K+SG    +I +A+ M++LYDSLQLAHK ILNSF
Sbjct: 769  TVRDFRDRRYDYKGKAKVWKGKTDALKSSGAPGNEIDDAKKMIILYDSLQLAHKVILNSF 828

Query: 786  YGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLPGSFPEN 845
            YGYVMRKG+RWYSMEMAGV   TGA IIQ AR L+E++G+PLELDTDGIWC+LP +FPEN
Sbjct: 829  YGYVMRKGSRWYSMEMAGVTCLTGATIIQLARQLVERLGRPLELDTDGIWCMLPATFPEN 888

Query: 846  FTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEFEVDGP 905
            F+FK K+  KKL ISYPCVMLN  V    TN QYQTLVD  +  YETHS+ SI FEVDGP
Sbjct: 889  FSFKLKN-GKKLNISYPCVMLNHLVHDKFTNHQYQTLVDDKTHKYETHSDNSIFFEVDGP 947

Query: 906  YKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFLHG 965
            Y+AMILP SKEE   +KKRYAVFNDDG+LAELKGFE+KRRGELKLIK+FQ ++F  FL G
Sbjct: 948  YRAMILPTSKEEDKNLKKRYAVFNDDGSLAELKGFEVKRRGELKLIKIFQQQIFKFFLEG 1007

Query: 966  STIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLADYGEQKSCAVTT 1025
              + +CY+AVA VAN+WLD+LDN+G  +AD EL++ ISE+ +MSK+L +YG QKS ++TT
Sbjct: 1008 EDLSQCYTAVAKVANQWLDVLDNKGSTLADQELMELISENRSMSKTLEEYGSQKSTSITT 1067

Query: 1026 ARRLSDFLGDTMVKDKGLRCQYIVACEPQGTPVSERAVPVAIFETDAEIMKFYLRKWCKT 1085
            ARRL+DFLG+ MVKDKGL C++I+   P+  PV+ERAVPVAIF  D  + + YL+KW K 
Sbjct: 1068 ARRLADFLGEQMVKDKGLNCKFIICSRPRNAPVTERAVPVAIFSADEAVKRTYLKKWLKE 1127

Query: 1086 S-SDVGIRSIVDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLYKKVREKEDK 1144
              +D   R+++DW YY +RL S IQK+ITIPAA+QKV NPVPRV HPDWL +++  K+DK
Sbjct: 1128 EPADTDPRALLDWDYYSERLGSVIQKLITIPAALQKVRNPVPRVPHPDWLQRRINIKDDK 1187

Query: 1145 FRQRKLVDIFSSLKKDDFLNKTCNAETNLMDENVEDLEDFPKKRRNSVNGPRPIVRCFEV 1204
             +Q+KL D+FSS        +     TN+     ED+EDF  K    +  P+ +      
Sbjct: 1188 MKQKKLTDLFSS-------KEPLADITNI--NRAEDMEDFGAK----LLKPKQL------ 1228

Query: 1205 NNEQKTVKTTDQVDSLRQQLEPSEVSDQQPSSQNAIDTENIDRIVDYKGWLELKKRKWKD 1264
              E         V   R+  EP+E     P+   A+     D   DY G+LE +K+KWK 
Sbjct: 1229 -GELIASSQPPAVSQKRKSPEPAE----NPNPMAALPDNMPDPSDDYVGFLEYQKKKWKL 1283

Query: 1265 NLDR--RKKQKLGSLRASHQANGVSESLGDMINHKEAQRRTGVGSYFRRQETAMTRCHWQ 1322
                  R++Q  G  R++  +N                    +   F +Q        WQ
Sbjct: 1284 QKQARLRRRQLFGERRSNANSN--------------------IQQTFMKQAHFTFMNTWQ 1323

Query: 1323 IIQLVPSSQSGVFLAWVVVEGIMVRIPITVPRLFYLNSKDPIVEKFPG--------RRVN 1374
            ++ L  +   GV  A V+++  +  + I VPR  +LN K    E+ P          +VN
Sbjct: 1324 LLHLKATDTPGVVTAHVLIDAKIHTLKINVPRQVFLNLKK---EELPDVEIAGCEVEQVN 1380

Query: 1375 KTLPHGRRSFNLIEVMIDEDQFRKESKKLAALLADPEVE 1413
             TLP+G +S +L ++ + ED +  E++K + L   P VE
Sbjct: 1381 YTLPNGHQSKHLFKLTVPEDVYFNEAEKFSLLFNHPSVE 1419



 Score =  235 bits (600), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 159/614 (25%), Positives = 284/614 (46%), Gaps = 67/614 (10%)

Query: 1408 ADPEVEVLGWQQNAAKIGMQRCAASSQWFNERISLARYAHI------------------- 1448
             D  +  LGWQ   A+  +        W     +LARY  +                   
Sbjct: 1616 TDSSLPPLGWQAVVARRLVGHYLGLGSWILHLTALARYGDVPLCNLERDDPRFLIDIAYA 1675

Query: 1449 ---------LWISDDGVPDLGGTSEEDECFA-DEVHQPVLTYPGAYRKVSVELKIHHLSV 1498
                     LW S D  PD  G  ++D   + D V  P +  PG +  V ++L I +L++
Sbjct: 1676 RRLQANGVVLWWSPDPRPDHAGYEKDDITGSLDTVKMPSINNPGTFSSVCIDLDIRNLTI 1735

Query: 1499 NALLKSNQVNEMEGGGLFGFDQDMNSGPYNNELCGFDETTSSAPAFRVVKQLIQRCLTDA 1558
            N +L S+ +NE+EG     F    N     +E+   +   ++A    V++++++    +A
Sbjct: 1736 NTILTSSLINELEGAESISF----NPTADGSEILASENGFANAGVL-VLREMVKAWWAEA 1790

Query: 1559 VTSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEFRKLGATIIFA 1618
               G+  AD ++QHL RW+ +P S ++D  LH  +  + +K F  L+++FR++G+ +IFA
Sbjct: 1791 C-KGSTMADVLVQHLVRWVENPDSFMYDRALHYYVQMMSRKAFQQLMSDFRRVGSQVIFA 1849

Query: 1619 NFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLFMDQYNYGGIP 1678
            + +++I+ T K ++  A AY   ++K+++++ LF +I+LE   +W  L++ D++NYGG  
Sbjct: 1850 SANRLILQTTKAEVGNAYAYSQYIIKSIKSKSLFHFIDLEIKEYWDYLVWYDEFNYGG-- 1907

Query: 1679 ARADESLDDDSQVDI--VSSWNIAEYLPKEIQDHFVLVVSEFMYIPWKHAQKLAASRASL 1736
             RA + + +  + D+  +  W +A +LP  +Q  F   V EF+       Q +   +   
Sbjct: 1908 -RATQVVAESEEQDLETIMHWQMATFLPVRLQPIFQDWVIEFI-------QLMHKLKRPE 1959

Query: 1737 QEGSSCTPSITVAAAE----NFESHIV--QYVKGEISSYFTGKLLSIVRDAIHHMKKMNN 1790
                + TP +T         + E+ I+  +  +  +     G +    R+ +H     + 
Sbjct: 1960 TNDPNSTPRLTQLPNRKQDPDGETQIILGKAFEKPMKKVIAGLINQQKRELMHPELAEDY 2019

Query: 1791 DQHNSPGVMQTAANIHKVDAPLEFIKHVCAAFALDQNVQHDVLVMRKNLLKYVRVREFAP 1850
               + PG     +++   +  LE +K +    +LD+N+  +  ++RK LL    +REF+ 
Sbjct: 2020 SFPSLPG-----SHLPLRNPILELVKSIMQVLSLDKNITLEARLLRKELLALFEIREFSK 2074

Query: 1851 EAEFRDPCPSFILPNVICSYCNDCRDLDLCRDMALLA-------QDWHCAMPQCGQPYDR 1903
            +  F +P  S  L  V C  C   RDLDLCRD  L +       Q W C    C   YDR
Sbjct: 2075 DGTFANPSESLKLLQVSCDSCTMTRDLDLCRDEDLFSSSGENGGQSWQCGF--CNTEYDR 2132

Query: 1904 EVMENALLQIVRQRERLYHLQDLVCIRCNQVKAAHLAEQCACAGSFRCKEDASDFRSKMQ 1963
              +E  LL +V      +  QDL C RC  ++     E C C+G ++      +   K+ 
Sbjct: 2133 VSIEERLLAMVEGWTTEWACQDLKCERCGALRVNDFMEHCTCSGGWKEVLSRDEIVRKLA 2192

Query: 1964 IFLNIANRQGFQLL 1977
            +   +A   G ++L
Sbjct: 2193 VMRRVAKYYGLRML 2206


>gi|213406643|ref|XP_002174093.1| DNA polymerase epsilon catalytic subunit A [Schizosaccharomyces
            japonicus yFS275]
 gi|212002140|gb|EEB07800.1| DNA polymerase epsilon catalytic subunit A [Schizosaccharomyces
            japonicus yFS275]
          Length = 2185

 Score = 1335 bits (3456), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 686/1409 (48%), Positives = 924/1409 (65%), Gaps = 85/1409 (6%)

Query: 23   AEEELEAKLGYDLFSEGDKRLGWLLTFASSSLEDEDTRKVYSCIDLYFVSQDGSTFKSKY 82
            ++ E++ K+G+D    G  R+GWLL    +S+  +D     S I LYF+ +DG TF+   
Sbjct: 45   SKNEIDTKMGFDNIEAGPPRIGWLLNVHPTSVPSDDNANGKSAIALYFIQEDGETFRVTV 104

Query: 83   KFRPYFYAATKEKMEMDVEAYLRRRYESQIADIEILEKEDLDLKNHLSGLHKSYLKISFD 142
             +RPY Y +TKE  E +VE YL++ + + I D + + K+DL L NHL G  K ++++ FD
Sbjct: 105  PYRPYLYVSTKEGKEAEVEDYLKKAFPNLIKDCKHVYKDDLKLVNHLVGYQKLFVQLFFD 164

Query: 143  TVQQLMDVKKDLLHVVERNQAKFDAAEAYESILT---GKREQRPQDF-LDCIVDLREYDV 198
                L  V++ +L     N+ + +A   Y  I      K E    D  LD I+D+REYDV
Sbjct: 165  NQMDLFTVRRLVLSASRTNENRREATNTYADIFETKDNKDESTNADAPLDYILDVREYDV 224

Query: 199  PYHIRFAIDNDVRCGQWYDVSISSTGPLLEKRVDLLQRAEVHVCAFDIETTKLPLKFPDA 258
            PYH R  ID +VR GQW++VS     P +      ++RAE  + AFDIETTK PLKFPD+
Sbjct: 225  PYHSRSLIDLNVRVGQWFNVSFKHGEPSITLDESRIERAEPVIMAFDIETTKSPLKFPDS 284

Query: 259  DYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNVNNEIELLRLWF 318
             +D +MMISYM+DGQG+LI NRE + EDI+D EYTPKPEFEG F + N  NE+ LL+ +F
Sbjct: 285  TFDQVMMISYMIDGQGFLITNREIISEDIQDFEYTPKPEFEGPFVIFNEENEMALLQRFF 344

Query: 319  AHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDKNQGECRAKFACHLDC 378
             H++  KP I VTYNGD+FDWPF++ RA+ HG  M +E+GF  D+ + E ++ +  H+D 
Sbjct: 345  RHIRSAKPSIIVTYNGDFFDWPFVDARASCHGMDMFQEIGFSKDQ-EDEYKSTYCAHMDA 403

Query: 379  FAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQMMASYSVSDAVATY 438
            F WVKRDSYLPQGSQGLKAVT AKLGYDP+E++PE M  +A EKPQ++A YSVSDAVATY
Sbjct: 404  FRWVKRDSYLPQGSQGLKAVTVAKLGYDPIELDPELMTIYASEKPQVLAQYSVSDAVATY 463

Query: 439  YLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVICPNKHQSDPEKF 498
            YLYM YVHPFIFSL  IIP++PDEVLRKG+GTLCE LL VQA   N++ PNKH    EKF
Sbjct: 464  YLYMKYVHPFIFSLCNIIPLNPDEVLRKGTGTLCETLLTVQACTRNIVLPNKHVDPLEKF 523

Query: 499  YRNHLLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQLLNNLDRDLQYAIKVEGKM 558
            +  HLL SETY+GGHVE LESGVFR+D+PT F LDP+ Y++LL+ LD  L ++I +E K 
Sbjct: 524  FDGHLLASETYVGGHVESLESGVFRADIPTDFHLDPNVYQELLDQLDSALHFSITIENKK 583

Query: 559  DLESVSNYDEVKNAIMEKLLRLQEEPIREECPLIYHLDVAAMYPNIILTNRLQPPSIVTD 618
            ++E +SNYDEVK  I+EKL  L++ P R+E P IYHLDVA+MYPNI++TNRLQP SI  +
Sbjct: 584  NMEDISNYDEVKAGIVEKLTALRDSPTRKENPRIYHLDVASMYPNIMITNRLQPDSIKDE 643

Query: 619  EVCTACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYYHLKKQIESE-FVDGTNGHLSKSFL 677
              C +CD N PGKTC RK+ W WRGE +  KR++Y  ++  ++SE F         +SF 
Sbjct: 644  SFCASCDLNVPGKTCDRKMIWAWRGEYYPPKRNEYNMIRNALQSEVFPPKFKNGPPRSFD 703

Query: 678  DLPKMEQQSRLKDRLKKYCQKAYKRVLDKPVTELREAGICMRENSFYVDTVRSFRDRRYE 737
            DL   EQ  R++ RL  Y +K Y ++ D  +   +E  IC +ENSFY+DTV+SFRDRRY+
Sbjct: 704  DLSPPEQAERIQKRLSDYSKKVYHKLYDNTIIN-KETVICQKENSFYIDTVKSFRDRRYD 762

Query: 738  YKGLNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHKCILNSFYGYVMRKGARWY 797
            +KGL K W   L+E +  G    I+EA+ M+VLY+SLQLAHK ILNSFYGYVMRKG+RWY
Sbjct: 763  FKGLQKKWGKILAERQKGGTLSGIEEAKKMIVLYNSLQLAHKVILNSFYGYVMRKGSRWY 822

Query: 798  SMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLPGSFPENFTFKTKDLKKKL 857
            S+EMAG+   TGA IIQ AR ++E+ G+PLELDTDGIWC+LP SFPENFT KTK    K 
Sbjct: 823  SIEMAGITCLTGATIIQMARQIVERAGRPLELDTDGIWCILPESFPENFTLKTKT-GGKF 881

Query: 858  TISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEFEVDGPYKAMILPASKEE 917
            T+SYPCVMLN  V    TN Q+  L +  +  YET SE SI FEVDGPY+AM+LPASKEE
Sbjct: 882  TVSYPCVMLNHLVHEKFTNHQFSVLKNAETLEYETFSENSIFFEVDGPYRAMVLPASKEE 941

Query: 918  GILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFLHGSTIEECYSAVAA 977
            G  +KKRYAVFN DG+LAELKGFEIKRRGELKLIK FQA++F  FL G T+EECY+ VA 
Sbjct: 942  GKNLKKRYAVFNFDGSLAELKGFEIKRRGELKLIKTFQAQIFKVFLQGKTLEECYAEVAK 1001

Query: 978  VANRWLDLLDNQGKDIADSELIDYISESSTMSKSLADYGEQKSCAVTTARRLSDFLGDTM 1037
            VA+ WL++L ++G  + D EL D ISE+ +M+K+L +YG QKS ++TTARRL++FLG+ M
Sbjct: 1002 VADNWLEVLFSKGSSVDDDELFDLISENRSMTKTLKEYGNQKSTSITTARRLAEFLGEQM 1061

Query: 1038 VKDKGLRCQYIVACEPQGTPVSERAVPVAIFETDAEIMKFYLRKWCKTSSDVG-----IR 1092
            VKD+GL C++I++ +P+G+PV+ERA+PVAIF  +  + K+YLR W K   D G     IR
Sbjct: 1062 VKDRGLACKFIISSQPRGSPVAERAIPVAIFSAEEGVKKYYLRSWLK---DFGRDSFDIR 1118

Query: 1093 SIVDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLYKKVREKEDKFRQRKLVD 1152
            SI+DW YY +RL S +QK+I+IPA +Q+++NPVPR+  P+WL+K+V E+  KF+Q KL  
Sbjct: 1119 SILDWDYYLERLGSVVQKLISIPAVLQRIANPVPRIPLPNWLFKRVAEQNSKFQQVKLES 1178

Query: 1153 IFSSLKKDDFLNKTCNAETNLMDENVEDLEDFPKKRRNSVNGPRPIVRCFEVNNEQKTVK 1212
              S  K +D  NK            + D+ED     +  V+ P  IV+      ++K V 
Sbjct: 1179 FLSKQKVED-KNKPV----------INDIEDILSPAKAHVS-PIAIVK------KRKAVH 1220

Query: 1213 T-TDQVDSLRQQLEPSEVSDQQPSSQNAIDTENIDRIVDYKGWLELKKRKWKDNLDRRKK 1271
            + T+   + ++   P                  I+   DY+ WL   K+KW      R +
Sbjct: 1221 SATEAPLTFKETFVP------------------INE--DYRHWLVYAKKKWAFQKQVRDR 1260

Query: 1272 QKLGSLRASHQANGVSESLGDMINHKEAQRRTGVGSYFRRQETAMTRCHWQIIQLVPSSQ 1331
            ++     ++  +     S+ ++IN+                        W I+Q+ P+  
Sbjct: 1261 RRTIIGHSNSISGAFQSSMEELINNT-----------------------WHILQIRPTDV 1297

Query: 1332 SGVFLAWVVVEGIMVRIPITVPRLFYLNSKD---PIVEKFPGRRVNKT---LPHGRRSFN 1385
             G+ LAW+VV   +  + + V R FY+N K    P VE   G  + K+   LPHG+ + N
Sbjct: 1298 PGLLLAWIVVNKRLTSVKLKVHRKFYVNFKTNDLPEVE-IEGCVIEKSNCILPHGKPTNN 1356

Query: 1386 LIEVMIDEDQFRKESKKLAALLADPEVEV 1414
            L  ++I E  ++ E   L+ + +   VEV
Sbjct: 1357 LFSLIIPEKIYQSECDCLSLIFSHNSVEV 1385



 Score =  224 bits (570), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 159/616 (25%), Positives = 276/616 (44%), Gaps = 59/616 (9%)

Query: 1415 LGWQQNAAKIGMQRCAASSQWFNERISLARYAHI-------------------------- 1448
              W+   AK+ ++       W   +  LA YA I                          
Sbjct: 1578 FSWKSTYAKMMIRHYLGIGPWITHQRQLAAYASIPFCNFEKDNMQYLLDIEYARRLTEKQ 1637

Query: 1449 --LWISDDGVPDLGGTSEEDEC-FADEVHQPVLTYPGAYRKVSVELKIHHLSVNALLKSN 1505
              LW + + +PDLGG   +D            L Y GAY   SV++ I +L++ ++L S 
Sbjct: 1638 IILWWNKNPLPDLGGLEHDDILHLTSPSDNFELNYSGAYANASVDIHISNLAMCSILNSA 1697

Query: 1506 QVNEMEGGGLFGF--DQDMNSGPYNNEL-CGFDETTSSAPAFRVVKQLIQRCLTDAVTSG 1562
             VN+ EG   F    D  + S   N E   G  E      +  ++K L++    +A   G
Sbjct: 1698 IVNDAEGVEDFSALDDSYLASDSGNLEARFGASENFGLTYSLPILKDLVKELWLEA-GKG 1756

Query: 1563 NVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEFRKLGATIIFANFSK 1622
            ++ AD I+QHL RW+    + ++DPVL   +  +M+K F  LLAEFR+ G  +++AN  +
Sbjct: 1757 DLIADLIIQHLVRWVQQTDAHMYDPVLVTHVRLLMRKTFLQLLAEFRRFGVHVVYANAKR 1816

Query: 1623 VIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLFMDQYNYGGIPARAD 1682
            V+I T K  +  A ++ + +LK +++  LF +++     +W  LL+MD +NYGG     +
Sbjct: 1817 VLISTKKPAIQTAASFANYVLKTIKSLPLFHFVDFTIREYWDYLLWMDPFNYGGKACIPE 1876

Query: 1683 ESLDDDSQVDIVSSWNIAEYLPKEIQDHFVLVVSEFMYIPWKHAQKLAASRASLQEGSSC 1742
                 +  +    SW+I ++LP  +Q+ F   + EF+    +   KL   +   Q+    
Sbjct: 1877 SLAQTNCVLQTTVSWHIKKHLPSSMQNEFQNWIIEFV----EEIHKLKMEKNEEQKLRVR 1932

Query: 1743 TPSITVAAAENFESHIVQYVKGEISSYFTGKLLSIVRDAIHHMKK--MNNDQHNSPGVMQ 1800
              +      E+ E  I+    G I   F   L   +    H  +K  +N+D      + Q
Sbjct: 1933 VRN----NNEDVEEEILG--AGLIKRKFLAPLERQISQFQHQYQKSLLNSDVDVDFSIPQ 1986

Query: 1801 -TAANIHKVDAPLEFIKHVCAAFALDQNVQHDVLVMRKNLLKYVRVREFAPEAEFRDPCP 1859
                ++   +  LEF K +C  F L  N+  +V  ++K+L   + VR+F+ + EF  P  
Sbjct: 1987 LPGTHLSPKNPVLEFAKSICTVFNLAGNLSLEVRALQKSLYSILNVRDFSKDTEFIYPSK 2046

Query: 1860 SFILPNVICSYCNDCRDLDLCRDMAL-----------LAQDWHCAMPQCGQPYDREVMEN 1908
               L  V C +C + +D DLC +  L            +  WHC +  C   YDR   E 
Sbjct: 2047 RLQLEQVPCKHCGNSQDFDLCLNEELWPERTESGQLQFSTGWHCTI--CNLEYDRWAFEE 2104

Query: 1909 ALLQIVRQRERLYHLQDLVCIRCNQVKAAHLAEQCACAGSFRCKEDASDFRSKMQIFLNI 1968
             L+++++++   + +QD  C +C  ++ +     C+C+G+++       F   + ++ NI
Sbjct: 2105 MLVEVLQKQLLKFQVQDFHCAKCGNIRTSPFKSLCSCSGAWKMSYPQEKFLDLLSVYRNI 2164

Query: 1969 ANRQGFQLLQECTSWI 1984
            A    F +L+   S I
Sbjct: 2165 AEYYEFTMLKAMVSTI 2180


>gi|330802940|ref|XP_003289469.1| hypothetical protein DICPUDRAFT_94903 [Dictyostelium purpureum]
 gi|325080427|gb|EGC33983.1| hypothetical protein DICPUDRAFT_94903 [Dictyostelium purpureum]
          Length = 2236

 Score = 1335 bits (3455), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 683/1430 (47%), Positives = 936/1430 (65%), Gaps = 102/1430 (7%)

Query: 26   ELEAKLGYDLFSEGD---KRLGWLLTFASSSLEDEDTRKVYSCIDLYFVSQDGSTFKSKY 82
            E E K+  D+ +E     ++ GWL+    SS +D++     S ++L+F+  D S+F++  
Sbjct: 7    ENETKVDKDIQNESKYVYEKEGWLVNMQPSSSKDKELGIDKSSLELFFIQDDASSFRAWI 66

Query: 83   KFRPYFYAATKEKMEMDVEAYLRRRYESQIADIEILEKEDLDLKNHLSGLHKSYLKISFD 142
             + PYFY   KE  + +VE+YL++ YE +IA I+ILEKEDLDL+NHLSGL K YLKI F 
Sbjct: 67   PYNPYFYIYVKEGHQNEVESYLKKTYEKKIAGIDILEKEDLDLENHLSGLKKKYLKIRFH 126

Query: 143  TVQQLMDVKKDLLHVVERNQAKFDAAEAYE------------------------------ 172
             VQ LM ++ D+  ++++N+ K + +EAYE                              
Sbjct: 127  NVQTLMAIRNDIFPIIKKNKQKTNTSEAYEDETLSSILSSLNSNNNNNNNNNNNNYGNSK 186

Query: 173  -SILTGKREQRPQDFLDCIVDLREYDVPYHIRFAIDNDVRCGQWYDVSISS--TGPLLEK 229
                +    + P ++   I+D+REYDVPY++R AID ++R G WY VS SS  + P++ +
Sbjct: 187  NKNKSKHSNKMPTEY---ILDIREYDVPYYVRAAIDLNIRVGLWYTVSKSSQSSPPIVTE 243

Query: 230  RVDLLQRAEVHVCAFDIETTKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIED 289
              +   R +  V A+DIETTKLPLKFPD+  D IMMISYMLD QGYLI+NRE V EDI+D
Sbjct: 244  IPNRPYRPDPKVLAYDIETTKLPLKFPDSSIDSIMMISYMLDRQGYLIVNREIVSEDIKD 303

Query: 290  LEYTPKPEFEGYFKVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHH 349
             EYTPKPE+ G F V N  NE  ++  +F+H++E KP I+V+YNGD FDWPF+E RA HH
Sbjct: 304  FEYTPKPEYYGPFTVFNEPNEKAVIEKFFSHIKEEKPHIFVSYNGDMFDWPFVEARAVHH 363

Query: 350  GFKMSEELGFQCDKNQGECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLE 409
            G  M  E+GF+CD   GE ++K   H+D F WVKRDSYLP GS GLKAVT+ KL YDPLE
Sbjct: 364  GIDMLREIGFRCD--NGEYKSKTNPHMDAFCWVKRDSYLPHGSHGLKAVTREKLRYDPLE 421

Query: 410  VNPEDMVRFAKEKPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSG 469
            ++PE M++ A+E P+ +A+YSVSDAVATYYLYM YVHPFIFSL TIIP++PD+VLRKGSG
Sbjct: 422  LDPELMLKSAQEDPETLANYSVSDAVATYYLYMNYVHPFIFSLCTIIPLNPDDVLRKGSG 481

Query: 470  TLCEMLLMVQAYKANVICPNKHQSDPEKFYRNHLLESETYIGGHVECLESGVFRSDLPTS 529
            TLCE LLM QA+KANVI PNKH+ D    Y+ HL+ESETY+GGHVECLESGVFRSD+PTS
Sbjct: 482  TLCEALLMTQAFKANVIFPNKHKDDINSMYKGHLIESETYVGGHVECLESGVFRSDIPTS 541

Query: 530  FKLDPSAYEQLLNNLDRDLQYAIKVEGKMDLESVSNYDEVKNAIMEKLLRLQEEPIREEC 589
            F LDP++ E  +NN+D  L++A+K E K+D  ++ NY EVK+ I++K   LQE P +   
Sbjct: 542  FSLDPNSIEIQMNNVDAVLEFALK-EAKLDKSTIGNYQEVKDDIIKKFKNLQEHPKQLSH 600

Query: 590  PLIYHLDVAAMYPNIILTNRLQPPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEIFMGK 649
            PLIYHLDV+AMYPNIILTN+LQP ++V +E C  C +N+P   C R L+W WRG+     
Sbjct: 601  PLIYHLDVSAMYPNIILTNKLQPAAVVNEEFCATCVYNKPENKCQRTLDWQWRGDYSPSN 660

Query: 650  RSDYYHLKKQIESEFVDGTNGHLSKSFLDLPKMEQQSRLKDRLKKYCQKAYKRVLDKPVT 709
             S+Y  + +Q+ESE      G+ S  + DL + ++ + L+ RLK+Y +K Y++       
Sbjct: 661  HSEYRLILQQLESEKF----GNDSTPYNDLDEEQRNTLLRKRLKEYSKKVYRKT-HIISQ 715

Query: 710  ELREAGICMRENSFYVDTVRSFRDRRYEYKGLNKVWKGKLSEA-KASG--NSIKIQEAQD 766
            E+R   ICMRENSFYVDTVR+FRDRRY YK L++  K K  ++ K SG  NS+ + EAQ 
Sbjct: 716  EIRSDTICMRENSFYVDTVRNFRDRRYTYKNLHRDAKTKYDKSMKESGGANSVAVLEAQG 775

Query: 767  MVVLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKP 826
             V+LY+SLQLAHKCILNSFYGYVMRKGARWYSM+MAG+VT+TG+ II+ AR ++E++G+P
Sbjct: 776  EVILYESLQLAHKCILNSFYGYVMRKGARWYSMQMAGIVTHTGSNIIKEAREVVEQMGRP 835

Query: 827  LELDTDGIWCVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPV 886
            LE+DTDGIWC+LP  FPEN+T K+ D  KK+T SY C MLN  V++N TN QYQ   DP 
Sbjct: 836  LEIDTDGIWCILPSHFPENYTLKS-DNGKKITFSYICEMLNEKVSKNFTNHQYQDF-DPE 893

Query: 887  SKTYETHSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRG 946
            +K Y    ECSI FE DGPY+ M++P SKE+ + +KKRYAVFN +G + ELKGFEIKRRG
Sbjct: 894  TKEYTIRDECSILFECDGPYRCMLIPTSKEKDVKLKKRYAVFNKEGRICELKGFEIKRRG 953

Query: 947  ELKLIKVFQAELFDKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESS 1006
            ELKLIK FQ+++F +FL G +++ CY +VAAVANRWLD LD+  ++  + +LI+ I+ESS
Sbjct: 954  ELKLIKEFQSQVFKEFLGGDSLDGCYQSVAAVANRWLDFLDSHAENYEEKDLIELITESS 1013

Query: 1007 TMSKSLADYGEQKSCAVTTARRLSDFLGDTMVKDKGLRCQYIVACEPQGTPVSERAVPVA 1066
             MS+ L +YG QKS A++TA++L++FLGD MVKDKGL CQYI++ +P G  ++ERA+PVA
Sbjct: 1014 NMSRKLEEYGSQKSSAISTAKKLAEFLGDEMVKDKGLSCQYIISNKPTGAAITERAIPVA 1073

Query: 1067 IFETDAEIMKFYLRKWCK--TSSDVGIRSIVDWSYYKQRLSSAIQKIITIPAAMQKVSNP 1124
            IF+ D E   +YLRKW K  +S+D+ IR ++DW YY+QRLS  IQKIITIPAA+Q VSNP
Sbjct: 1074 IFDADYETRCYYLRKWIKSGSSNDLEIRELIDWDYYRQRLSGVIQKIITIPAALQNVSNP 1133

Query: 1125 VPRVVHPDWLYKKVREKEDKFRQRKLVDIFSSLKKDDFLNKTCNAETNLMDENVEDLEDF 1184
            VPRV HPDW+ K++R+ ED  +Q  +   F      +  +     +       ++D+E+ 
Sbjct: 1134 VPRVTHPDWILKEIRKNEDGRQQTSITSFFEPSSNSNNNDNDDQDQPG----EIQDIENM 1189

Query: 1185 PKKRRNSVNGPRPIVRCFEVNNEQKTVKTTDQVDSLRQQLEPSEVSDQQPSSQNAIDTEN 1244
               R  ++   +P V       + K +     + SL++    S + + Q   +  +  + 
Sbjct: 1190 FSSRFKNLPPVQPKV------TKHKRINQNSIISSLKKANSRSHLFNNQEEEERILKEKT 1243

Query: 1245 IDRIVDYKGWLELKKRKWKDNLDRRKKQKLGSLRASHQANGVSESLGDMINHKEAQRRTG 1304
                 D++GWLE  K+KW               R  HQ                      
Sbjct: 1244 PSYEKDFEGWLESSKKKW---------------RVQHQ---------------------- 1266

Query: 1305 VGSYFRRQETAMTRCHWQIIQLVP-SSQSGVFLAWVVVEGIMVRIPITVPRLFYLNSKDP 1363
            V  Y   Q   + R  W II + P  +Q+G++  W +++  ++ I +++ R+FYLNS D 
Sbjct: 1267 VQVYLISQSDLIKRGVWNIISIEPVPNQNGLYQFWSLIDDQIIPIKVSIDRVFYLNSIDK 1326

Query: 1364 IVEKFPGRRVNKTLPHGRRSFNLIEVMIDEDQFRKESKKLAALLADPEVE 1413
                      N   P  +   NL  + + E+ F +ES++L  L  +P +E
Sbjct: 1327 NPHPLAKEEPNVVPPRSKPKINLFSLSMSEETFLQESRELNTLFTNPMIE 1376



 Score =  149 bits (376), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 72/193 (37%), Positives = 116/193 (60%), Gaps = 12/193 (6%)

Query: 1802 AANIHKVDAPLEFIKHVCAAFALDQNVQHDVLVMRKNLLKYVRVREFAPEAEFRDPCPSF 1861
             +++   + PLEFIK VC   ++D+++   V  +RKNL+K + VREF+ EA+F DPC SF
Sbjct: 2039 GSHLELTNPPLEFIKFVCHVLSIDKSIASKVQRLRKNLMKMINVREFSEEAQFNDPCISF 2098

Query: 1862 ILPNVICSYCNDCRDLDLCRDMAL-----------LAQDWHCAMPQCGQPYDREVMENAL 1910
             LP+VICS C+ CRD+DL R+              +  D   +  QC   Y +  +E+ L
Sbjct: 2099 TLPDVICSSCHSCRDIDLLRNRNTTDSIDDDNGVSVNNDNELSCTQCKSKYCKNTIESQL 2158

Query: 1911 LQIVRQRERLYHLQDLVCIRCNQVKAAHLAEQCA-CAGSFRCKEDASDFRSKMQIFLNIA 1969
            ++I+++R   Y LQDL C +C+ +K+ +L+E CA C+G++ C ++ + F + + IF NIA
Sbjct: 2159 VEIIQRRSLSYQLQDLKCSKCHDIKSDNLSEICAQCSGNWECTQNNNQFLTDLIIFKNIA 2218

Query: 1970 NRQGFQLLQECTS 1982
                F+ L E  +
Sbjct: 2219 KFFNFEWLDETVT 2231


>gi|321263989|ref|XP_003196712.1| DNA polymerase epsilon, catalytic subunit a [Cryptococcus gattii
            WM276]
 gi|317463189|gb|ADV24925.1| DNA polymerase epsilon, catalytic subunit a, putative [Cryptococcus
            gattii WM276]
          Length = 2241

 Score = 1335 bits (3454), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 687/1441 (47%), Positives = 927/1441 (64%), Gaps = 110/1441 (7%)

Query: 8    RQDGRRTKKQKLIRSAEEELEAKLGYDLF----SEGDKRLGWLLTFASSSLEDEDTRKVY 63
            R DG    ++     A +E++ K+G+  F    +EG++++GWL+    + ++ +      
Sbjct: 48   RDDGTAATEKFEEVKAYDEIDEKIGFWRFESVRAEGEQKVGWLVNMHQTLMQSDAHPGGL 107

Query: 64   SCIDLYFVSQDGSTFKSKYKFRPYFYAATKEKMEMDVEAYLRRRYESQIADIEILEKEDL 123
            + +D YF+  DG +FK    + PYFY   +   E  VE +L +RYE  I  IE  +K DL
Sbjct: 108  AAVDYYFIQDDGGSFKVSIPYEPYFYLTCRGGTESIVEEWLLKRYEGIIIRIEREKKWDL 167

Query: 124  DLKNHLSGLHKSYLKISFDTVQQLMDVKKDLLHVVERNQAKFDAAEAYESILTGK----- 178
            +L NHL      +LK+ F     L  +++DLL +   N  KF A +AY  +++ +     
Sbjct: 168  NLPNHLLSAPPVFLKLFFHNTADLHTIRRDLLPLARSNSEKFTAVDAYADVVSAEAAANG 227

Query: 179  ---------------REQRPQDFLDCIVDLREYDVPYHIRFAIDNDVRCGQWYDVSISST 223
                           R+++ ++  +CI+++RE+D+ YH+R AID ++R G WY V+  + 
Sbjct: 228  HGDDESKAWGAEDDIRKKKDKEPSECIIEVREHDLAYHLRVAIDLNIRVGLWYTVTSRTG 287

Query: 224  GPLLEKRVDLLQRAEVHVCAFDIETTKLPLKFPDADYDIIMMISYMLDGQGYLIINRECV 283
               LE+  D ++RA+  V A+DIETTK PLKFPD   D IMMISYM+DG GYLI NRE V
Sbjct: 288  VITLERIPDRVKRADPVVMAYDIETTKQPLKFPDQQTDQIMMISYMIDGMGYLITNREIV 347

Query: 284  GEDIEDLEYTPKPEFEGYFKVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLE 343
            GEDI+D EYTPK E+ G F V N  +E  ++R WF H+++ KP +  TYNGD FD+PF++
Sbjct: 348  GEDIDDFEYTPKDEYPGEFTVFNEPDEPAVIRRWFEHIRDSKPTVIATYNGDSFDFPFVD 407

Query: 344  TRAAHHGFKMSEELGFQCDKNQGECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKL 403
             RA  HG  M EE+GF+ D  + E +++   H+DCF WVKRDSYLPQGSQGLKAVT AKL
Sbjct: 408  VRAKIHGISMYEEIGFKPDI-EDEYKSRSTMHMDCFRWVKRDSYLPQGSQGLKAVTTAKL 466

Query: 404  GYDPLEVNPEDMVRFAKEKPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEV 463
            GY+P+E++PE M  +A E+PQ++A YSVSDAVATYYLYM YVHPFIFSL  IIP+SPDEV
Sbjct: 467  GYNPIELDPELMTPYAIEQPQILAQYSVSDAVATYYLYMKYVHPFIFSLCNIIPLSPDEV 526

Query: 464  LRKGSGTLCEMLLMVQAYKANVICPNKHQSDPEKFYRNHLLESETYIGGHVECLESGVFR 523
            LRKG+GTLCE LLMV+AY A++I PN+H+      Y  HLL SETY+GGHVE LE+GVFR
Sbjct: 527  LRKGTGTLCETLLMVEAYDAHIIMPNRHEDPHGVTYEGHLLASETYVGGHVEALEAGVFR 586

Query: 524  SDLPTSFKLDPSAYEQLLNNLDRDLQYAIKVEGKMDLESVSNYDEVKNAIMEKLLRLQEE 583
            SD+PT FK+ PSA + L+++LD  LQ+++  EG++ LE V NYDE+K  I   L  +++E
Sbjct: 587  SDIPTHFKIVPSAIQGLIDDLDAALQFSLIEEGQVKLEDVENYDEIKQQIQTALETMRDE 646

Query: 584  PIREECPLIYHLDVAAMYPNIILTNRLQPPSIVTDEVCTACDFNRPGKTCLRKLEWVWRG 643
            P R + PLIYHLDVAAMYPNI+L+NRLQP S+  +  C  CD+NRP K C R++EW WRG
Sbjct: 647  PNRFDNPLIYHLDVAAMYPNIMLSNRLQPDSVKEEADCAVCDYNRPDKKCDRRMEWAWRG 706

Query: 644  EIFMGKRSDYYHLKKQIESEFVDGTNGHLSK-SFLDLPKMEQQSRLKDRLKKYCQKAYKR 702
            E F  KR +   ++  +E E       +  K  F+DL   EQ + L  RL  Y +K YK+
Sbjct: 707  EYFPAKRDEVNMVRYALEQEMFPPKRPYDPKRRFVDLSPAEQSALLHKRLGDYSRKVYKK 766

Query: 703  VLDKPVTELREAGICMRENSFYVDTVRSFRDRRYEYKGLNKVWKGKLSEAKASGNSI-KI 761
              D  +   +   IC RENSFY+DTVR+FRDRRYEYKGL+K WK  L +A   G ++  +
Sbjct: 767  THDTKIVT-KTTIICQRENSFYIDTVRAFRDRRYEYKGLHKTWKKNLDKAFEEGGAVAAV 825

Query: 762  QEAQDMVVLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIE 821
             EA+ M+VLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAG+   TGA IIQ AR L+E
Sbjct: 826  DEAKKMIVLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGITCLTGATIIQMARQLVE 885

Query: 822  KIGKPLELDTDGIWCVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQT 881
            +IG+PLELDTDGIWC+LPG FPE+F FK K+  KK  ISYPC MLN  V    TNDQY  
Sbjct: 886  QIGRPLELDTDGIWCMLPGVFPEDFNFKLKN-GKKFGISYPCTMLNHLVHAQFTNDQYHE 944

Query: 882  LVDPVSKTYETHSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFE 941
            LVD  S TY    E SI FE+DGPYKAMILP+SKEE  L+KKRYAVFN DG+LAELKGFE
Sbjct: 945  LVDNDSGTYNVKKENSIFFELDGPYKAMILPSSKEEDKLLKKRYAVFNPDGSLAELKGFE 1004

Query: 942  IKRRGELKLIKVFQAELFDKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDY 1001
            +KRRGEL++IK+FQ+++FDKFL G T EECY+AVA VA++WLD+L ++   + D EL+D 
Sbjct: 1005 VKRRGELQMIKIFQSQIFDKFLLGKTTEECYAAVATVADQWLDILQSKASSLHDDELVDL 1064

Query: 1002 ISESSTMSKSLADYGEQKSCAVTTARRLSDFLGDTMVKDKGLRCQYIVACEPQGTPVSER 1061
            I+E+ +MSK+LA+Y  QKS +++TARRL++FLG+ MVKDKGL C++I++ +P G PV+ER
Sbjct: 1065 IAENRSMSKTLAEYAGQKSTSISTARRLAEFLGEQMVKDKGLSCRFIISAKPNGAPVTER 1124

Query: 1062 AVPVAIFETDAEIMKFYLRKWCKTSS--DVGIRSIVDWSYYKQRLSSAIQKIITIPAAMQ 1119
            AVPVAIF  +  + + YLRKW K +S  D  +R+I+DW YY +RL S IQK+ITIPAA+Q
Sbjct: 1125 AVPVAIFTAEETVKRHYLRKWLKDNSLTDFDLRTILDWEYYTERLGSVIQKLITIPAALQ 1184

Query: 1120 KVSNPVPRVVHPDWLYKKVREKEDKFRQRKLVDIFSSLKKDDFLNKTCNAETNLMDENVE 1179
            KV NPVPR+ HPDWLYK++  KEDKF+Q K+ DIF+ LK                     
Sbjct: 1185 KVPNPVPRIRHPDWLYKRIATKEDKFQQHKITDIFTKLK--------------------- 1223

Query: 1180 DLEDFPKKRRNSVNGPRPIVRCFEVNNEQKTVKTTDQVDSLRQQLEPSEVSDQQPSSQNA 1239
            D+EDF                     + QK V     V   R + +  +  + +    + 
Sbjct: 1224 DMEDF--------------------GDGQKKVGPKLAVVRKRNKKQQEKEPEVEEVPPHP 1263

Query: 1240 IDTENIDRIVDYKGWLELKKRKWKDNLDRRKKQKLGSLRASHQANGVSESLGDMINHKEA 1299
             D        DY G++ + K+KW       +KQ+    RA                 K  
Sbjct: 1264 ED--------DYAGYIRVMKKKW-------RKQRHEKARA----------------RKSG 1292

Query: 1300 QRRTG-VGSYFRRQETAMTRCHWQIIQLVPSSQSGVFLAWVVVEGIMVRIPITVPRLFYL 1358
             R+ G + S  R Q + M    W +IQ+  +++ G F  W+ ++G    + + VPR FYL
Sbjct: 1293 LRQDGTIFSMLRTQTSTMNSKQWDVIQIASTNRPGEFKLWLAIDGTFQSVRLRVPREFYL 1352

Query: 1359 N-SKDP-----IVEKFPGRRVNKTLPHGRRSFNLIEVMIDEDQFRKESKKLAALLADPEV 1412
            N  KDP       +++    V +TLP G+ + +L ++ +DE  F +     + L+ +P V
Sbjct: 1353 NFKKDPDPQLLATDRYEAVEVVRTLPRGQPARHLYKLSVDEVLFMEGESHFSTLINNPNV 1412

Query: 1413 E 1413
            +
Sbjct: 1413 D 1413



 Score =  253 bits (646), Expect = 8e-64,   Method: Compositional matrix adjust.
 Identities = 164/569 (28%), Positives = 277/569 (48%), Gaps = 59/569 (10%)

Query: 1448 ILWISDDGVPDLGGTSEEDECFADEVHQPVLTYPGAYRKVSVELKIHHLSVNALLKSNQV 1507
            ++W S    PDLGG SEED   ++++  P ++  G Y    +EL++  L++NA+L+S  V
Sbjct: 1668 LIWWSSTPRPDLGG-SEEDANSSEDLVSPHISNRGCYSSTVLELEVSDLAINAVLQSALV 1726

Query: 1508 NEMEGGGL--FGFDQ------DMNSGPYNNELCGFDETTSSAPAFRVVKQLIQRCLTD-- 1557
            NEMEG G     FD       +   G  N  +   D   S+   F V+K +++    D  
Sbjct: 1727 NEMEGSGTGSLAFDSASHNLDEYAKGAVNAPVMLGDAVLSTQ-TFGVLKSMLRALYADKA 1785

Query: 1558 -AVTSGNVFADA--ILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEFRKLGAT 1614
             A   G+  + A  ++   +RW+ S  S + +P LHR LH +M+K F  LLAEF++LG  
Sbjct: 1786 RAHVKGDSVSPAELVVDQFWRWISSSTSSMFEPALHRFLHGLMRKTFLQLLAEFKRLGTQ 1845

Query: 1615 IIFANFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLFMDQYNY 1674
            +++A+F ++ + T K D  +A A+   L+ A  ++ELF  + ++ V FW+ L +MD  N+
Sbjct: 1846 VVYADFGRIFLLTSKPDAGSAFAFAKYLVAAANSQELFRHLIIDVVQFWNYLAWMDVANF 1905

Query: 1675 GGI---PARADESLDDDSQVDIVSSWNIAEYLPKEIQDHFVLVVSEFMYIPWKHAQKLAA 1731
            GG+   P  A        + +I   WNI  +LP  +Q  F   V+ F++  +   +  + 
Sbjct: 1906 GGVKVSPETAASREPPAKRFEISMDWNIQSFLPATLQPVFERNVASFIFSLYSAKRSSSD 1965

Query: 1732 SRASL---------QEGSSCTPSITVAAAENFESHIVQYVKGEISSYFTGKLLSIVRDAI 1782
             R  L         Q G+  T ++     +  ++         IS   T +LL      I
Sbjct: 1966 GREPLRVIHSLNIDQPGTEATSTVNPVKEKEKKAASKS-----ISQTLTRRLLF----DI 2016

Query: 1783 HHMKKMNNDQHNSPGVMQT-------AANIHKVDAPLEFIKHVCAAFALDQNVQHDVLVM 1835
              +K+     H  P    T        A   + +  LE IK +   +AL       V ++
Sbjct: 2017 AGVKRQQAAVHLEPEEAYTLAFPDLPGARSKRTNPTLELIKAITEVYALASEHSIHVQIL 2076

Query: 1836 RKNLLKYVRVREFAPEAEFRDPCPSFILPNVICSYCNDCRDLDLCRDMALLA-------- 1887
            ++NLL  + V+EF+ +A F  PC S  +P VIC  CN  RD+DLCRD   L         
Sbjct: 2077 KRNLLDLIGVKEFSSDAAFVPPCDSIEVPMVICKRCNAIRDVDLCRDPDRLPSVDPDSGD 2136

Query: 1888 ------QDWHCAMPQCGQPYDREVMENALLQIVRQRERLYHLQDLVCIRCNQVKAAHLAE 1941
                  + W C   +C   Y R  +E  L++++ +    Y +QD++C++C+Q K+ +LA 
Sbjct: 2137 MLEPARKSWVCH--KCDSEYGRFQIEQPLIEVITKMITNYQIQDVICLKCSQTKSDNLAA 2194

Query: 1942 QCACAGSFRCKEDASDFRSKMQIFLNIAN 1970
             C C G FR   + ++ ++K+++  ++ +
Sbjct: 2195 TCKCGGGFRTMSNRNELKTKLKMIKSVCD 2223


>gi|310791956|gb|EFQ27483.1| DNA polymerase family B [Glomerella graminicola M1.001]
          Length = 2233

 Score = 1335 bits (3454), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 685/1426 (48%), Positives = 937/1426 (65%), Gaps = 77/1426 (5%)

Query: 15   KKQKLIRSAEEELEAKLGYDLFSEGDKRLGWLLTFASSSLEDEDTRKVYSCIDLYFVSQD 74
            ++ +L+++ +E     +G+  +  G ++ GWL+    +S+ED+      + +D YF+  D
Sbjct: 47   ERTRLVQAIDE----NMGFARYEGGKRKEGWLVNVQPTSVEDDRIPGGRAALDCYFIEDD 102

Query: 75   GSTFKSKYKFRPYFYAATKEKMEMDVEAYLRR-RYESQIADIEILEKEDLDLKNHLSGLH 133
            GS FK+  ++ PYF  A K+  E +VE +L+R   +  +  I+ +EKEDL + NHL G  
Sbjct: 103  GSHFKATVEYNPYFLIAVKKGRESEVEEWLKRVPGDGVVKTIKRVEKEDLKMPNHLMGYR 162

Query: 134  KSYLKISFDTVQQLMDVKKDLLHVVERNQAKFDAAEAYESILTGKREQRPQ--------- 184
            +++L++ F  V  LM  +KD++ +  +N+   DA +AY  + T   +             
Sbjct: 163  RTFLELRFANVNDLMAARKDIMPIAAKNRKNVDALDAYAEVQTTNGDFDLFDDSRDDDRR 222

Query: 185  ------DFLDCIVDLREYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLLEKRVDLLQRAE 238
                  D  D IVD+REYDVPYH+R  ID D+R G+WY + +      +    D L  A+
Sbjct: 223  ANASFADASDFIVDIREYDVPYHVRVMIDMDIRVGKWYFIDVKHGVTKVTTNEDRLAMAD 282

Query: 239  VHVCAFDIETTKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEF 298
              V A+DIETTKLPLKFPDA  D +MMISYM+DGQG+LI NRE V EDI D +YTPKPE+
Sbjct: 283  PVVMAYDIETTKLPLKFPDAAIDQVMMISYMIDGQGFLITNREIVSEDISDFDYTPKPEY 342

Query: 299  EGYFKVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELG 358
             G F + N  +E  +L  +F H++E +P +  TYNGD+FDWPF++ RA+ +G  M +E+G
Sbjct: 343  PGSFMIFNEPDEKAVLERFFLHIKEARPTVIATYNGDFFDWPFVDARASVNGIDMYQEIG 402

Query: 359  FQCDKNQGECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRF 418
            ++ D ++ + +  ++ H+DCF WV RDSYLPQGS+GLKAVT AKLGYDP E++PE M  +
Sbjct: 403  WKKD-SEDQYKCSYSVHMDCFHWVNRDSYLPQGSRGLKAVTVAKLGYDPDELDPELMTPY 461

Query: 419  AKEKPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMV 478
            A E+PQ +A YSVSDAVATYYLYM YVHPFIFSL TI+P+  D+ LRKG+GTLCEMLLMV
Sbjct: 462  AAERPQTLAEYSVSDAVATYYLYMKYVHPFIFSLCTILPLGGDDTLRKGTGTLCEMLLMV 521

Query: 479  QAYKANVICPNKHQSDPEKFYRNHLLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYE 538
            QAY+  ++ PNKH S  E FY  HLL+SETY+GGHVE +E+GVFR+D+P +F +D  A +
Sbjct: 522  QAYQQEIVLPNKHVSPREAFYEGHLLDSETYVGGHVESIEAGVFRADIPVNFAVDTGAVD 581

Query: 539  QLLNNLDRDLQYAIKVEGKMDLESVSNYDEVKNAIMEKLLRLQEEPIREECPLIYHLDVA 598
            +LL +LD  L+++I VE K  ++ + NYDE++  I  +L  L+E P R E PLIYHLDVA
Sbjct: 582  ELLTDLDAALKFSITVEEKKSMDDIENYDEIREQIASRLRALKETPNRSERPLIYHLDVA 641

Query: 599  AMYPNIILTNRLQPPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYYHLKK 658
            +MYPNI+ TNRLQP S++ +  C ACDFNRPGKTC R+L W WRGE    KR +Y  ++ 
Sbjct: 642  SMYPNIMTTNRLQPDSMIQESDCAACDFNRPGKTCDRRLPWAWRGEYLPAKRDEYNMIRN 701

Query: 659  QIESEFVDGT-NGHLSKSFLDLPKMEQQSRLKDRLKKYCQKAYKRVLDKPVTELREAGIC 717
             +E+E   G       ++F DL   EQ + L+ RL+ + QK Y ++ D   T ++EA IC
Sbjct: 702  ALENEKFPGKWPNSPQRTFQDLSPDEQTALLRKRLQIFSQKVYHKIHDS-TTIVKEAIIC 760

Query: 718  MRENSFYVDTVRSFRDRRYEYKGLNKVWKGKLSEAKASG-NSIKIQEAQDMVVLYDSLQL 776
             REN FY++TVR FRDRRY+YKG  KVWKGK    K SG  S ++  A+ M++L+DSLQL
Sbjct: 761  QRENPFYINTVRDFRDRRYDYKGKAKVWKGKTEALKQSGATSSEVDAAKKMIILFDSLQL 820

Query: 777  AHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWC 836
            AHK ILNSFYGYVMRKG+RWYSMEMAGV   TGA IIQ AR L+E++G+PLELDTDGIWC
Sbjct: 821  AHKVILNSFYGYVMRKGSRWYSMEMAGVTCLTGATIIQLARSLVERLGRPLELDTDGIWC 880

Query: 837  VLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSEC 896
            +LP +FPENF FK K+  KKLTISYPC MLN  V    TN QYQTLVDP +  YETHS+ 
Sbjct: 881  MLPATFPENFAFKMKN-GKKLTISYPCTMLNHLVHAKFTNHQYQTLVDPKTLKYETHSDN 939

Query: 897  SIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQA 956
            SI FEVDGPYKAM+LP SKEE   +KKRYAVFNDDG+LAELKGFE+KRRGELKLIK+FQ 
Sbjct: 940  SIFFEVDGPYKAMVLPTSKEEDKNLKKRYAVFNDDGSLAELKGFEVKRRGELKLIKIFQQ 999

Query: 957  ELFDKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLADYG 1016
            ++F  FL G T+ +CY+AVA VAN+WLD+L  +G  +AD EL++ ISE+ +MSK+L +YG
Sbjct: 1000 QIFKFFLEGETLADCYAAVAKVANQWLDVLHGKGSTLADEELMELISENRSMSKTLEEYG 1059

Query: 1017 EQKSCAVTTARRLSDFLGDTMVKDKGLRCQYIVACEPQGTPVSERAVPVAIFETDAEIMK 1076
             QKS ++TTA+RL+DFLG+ MVKDKGL C++I+   P+  PV+ERAVPVAIF  +    +
Sbjct: 1060 SQKSTSITTAKRLADFLGEQMVKDKGLNCKFIICARPKNAPVTERAVPVAIFSAEETTKR 1119

Query: 1077 FYLRKWCKTS-SDVGIRSIVDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLY 1135
            FYL+KW K   +D   R+++DW YY +RL S IQK+ITIPAA+QKV NPVPRV HPDWL 
Sbjct: 1120 FYLKKWLKEEPADTDPRALLDWDYYLERLGSVIQKLITIPAALQKVRNPVPRVPHPDWLQ 1179

Query: 1136 KKVREKEDKFRQRKLVDIFSSLKKDDFLNKTCNAETNLMDENVEDLEDFPKKRRNSVNGP 1195
            +++  K+DK +Q+KL D+F+    +D         TNL   +  D+EDF  +        
Sbjct: 1180 RRINIKDDKMKQKKLTDLFAKGPLEDI--------TNLNGRSAADMEDFGSQ-------- 1223

Query: 1196 RPIVRCFEVNNEQKTVKTTDQVDSLRQQLEPSEVSDQQPSSQNAIDTENIDRIVDYKGWL 1255
              +++  +V +   + +        R+  EP+E +D  P +  A+  E      DY G+L
Sbjct: 1224 --LLKPKQVTSVVASSQAAASTSQKRKSPEPAENAD--PFA--ALPKEMPSPSDDYVGFL 1277

Query: 1256 ELKKRKWKDNLDR--RKKQKLGSLRASHQANGVSESLGDMINHKEAQRRTGVGSYFRRQE 1313
            + +K+KWK       R++Q  G  R ++Q N                    + + F +Q 
Sbjct: 1278 QYQKQKWKIQKQARIRRRQLFGDRRGNNQNN--------------------IQNTFMKQA 1317

Query: 1314 TAMTRCHWQIIQLVPSSQSGVFLAWVVVEGIMVRIPITVPRLFYLNSKD---PIVEKFPG 1370
                   WQ++ L P+   G+  A V+++  +  + I VPR  +LN K    P V+  PG
Sbjct: 1318 HLTFMSTWQLLHLKPTDTPGIVNAHVLIDAKIHSLKIKVPRQVFLNLKSGDMPDVD-IPG 1376

Query: 1371 ---RRVNKTLPHGRRSFNLIEVMIDEDQFRKESKKLAALLADPEVE 1413
                +VN TLP+G  S +L ++ + ED +  E+ K + L   P VE
Sbjct: 1377 CEVEQVNHTLPNGHSSVHLFKLTVPEDIYFSEADKFSLLFNHPSVE 1422



 Score =  246 bits (628), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 169/628 (26%), Positives = 295/628 (46%), Gaps = 74/628 (11%)

Query: 1408 ADPEVEVLGWQQNAAKIGMQRCAASSQWFNERISLARYAHI------------------- 1448
            AD  +  LGWQ   A+  +        W     +LARY  +                   
Sbjct: 1619 ADSSLPPLGWQTAVARRLVGHYLGLGSWIVHLTTLARYGEVPLCNLEREDPRFLIDIAYA 1678

Query: 1449 ---------LWISDDGVPDLGGTSEEDECFADE-VHQPVLTYPGAYRKVSVELKIHHLSV 1498
                     LW S    PD  G  ++D     E V  P +  PG +  V ++L++ +L++
Sbjct: 1679 RRLQNNNVVLWWSASPRPDHAGHEKDDITGPLETVQMPAVNNPGTFSSVCIDLEVRNLAI 1738

Query: 1499 NALLKSNQVNEMEGGGLFGFDQDMNSGPYNNELCGFDETTSSAPAFRVVKQLIQRCLTDA 1558
            N +L S+ +NE+EG     F+   +     +E+   + T ++A    V++++++    +A
Sbjct: 1739 NTILTSSLINELEGSDSISFNPAGDGNAAGDEVISSEGTFANAGVL-VLREMVKSWWQEA 1797

Query: 1559 VTSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEFRKLGATIIFA 1618
               G+  AD ++QHL RW+ SP S L+D  LH  +  + +K F  L+A+FR++G+ ++FA
Sbjct: 1798 C-KGSAMADVMVQHLVRWVESPDSFLYDRALHYYVQMMSRKAFQQLMADFRRVGSQVVFA 1856

Query: 1619 NFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLFMDQYNYGGIP 1678
            N +++++ T K ++  A AY   ++K+++++ LF +I+LE   +W  L++ D++NYGG  
Sbjct: 1857 NSNRLLLQTTKAEVGTAYAYSQYIIKSIKSKPLFHFIDLEIKEYWDYLVWYDEFNYGG-- 1914

Query: 1679 ARADESLDDDSQ-VDIVSSWNIAEYLPKEIQDHFVLVVSEFMYIPWKHAQKLAASRASLQ 1737
                E ++ + Q +D V  W +A +LP  +Q  F   V EF+        +L  +    Q
Sbjct: 1915 KACQEVVEAEQQTLDTVMHWQMATFLPIRLQPTFQDWVIEFI--------QLMHNFKRPQ 1966

Query: 1738 EGS-SCTPSIT----VAAAENFESHIV------QYVKGEISSYFTGKLLSIVRDAIHHMK 1786
             G  S TP +T     + AE  +  I+      + +K E+++    +     R+ +H   
Sbjct: 1967 NGDLSSTPRLTQLPQKSLAEGAQGQIILGKAFEKPLKKEMANLINLQ----KRELLHPEL 2022

Query: 1787 KMNNDQHNSPGVMQTAANIHKVDAPLEFIKHVCAAFALDQNVQHDVLVMRKNLLKYVRVR 1846
              +    + PG   T  ++   +A LE +K +    +LD+N+  +  ++RK LL    VR
Sbjct: 2023 AEDYSFPHLPGSHLT--HLSSRNAVLELVKALMQVLSLDKNITLEARLLRKELLAMFDVR 2080

Query: 1847 EFAPEAEFRDPCPSFILPNVICSYCNDCRDLDLCRDMALLAQ-------------DWHCA 1893
            EF+ E  F++P  S  +  + C  C   RDLD CRD  L+ +              W C 
Sbjct: 2081 EFSKEGAFQNPSESLKVIQLSCDSCTMARDLDFCRDEDLMPEMGPDGKRLGPETRPWRCT 2140

Query: 1894 MPQCGQPYDREVMENALLQIVRQRERLYHLQDLVCIRCNQVKAAHLAEQCACAGSFRCKE 1953
               C   YDR  +E  LL  V      +  QDL C +C  ++     E C C+G +    
Sbjct: 2141 F--CEAEYDRNAIEEMLLARVEAFVVEWTTQDLKCGKCGALRMNEFMEHCTCSGEWVESV 2198

Query: 1954 DASDFRSKMQIFLNIANRQGFQLLQECT 1981
              +D   ++ +F N+A   G ++L E T
Sbjct: 2199 RRADIVRRLNVFRNVAQFYGLKMLLEVT 2226


>gi|116204163|ref|XP_001227892.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
 gi|88176093|gb|EAQ83561.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
          Length = 2183

 Score = 1334 bits (3453), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 678/1418 (47%), Positives = 920/1418 (64%), Gaps = 97/1418 (6%)

Query: 26   ELEAKLGYDLFSEGDKRLGWLLTFASSSLEDEDT--RKVYSCIDLYFVSQDGSTFKSKYK 83
            +++  +G+  +  G +R GWL+    +S++D         S +D YF+ +DGSTFK+  +
Sbjct: 78   QIDENMGFSRYDAGKRREGWLVNIQPTSIDDPRVPGGGGRSALDCYFIEEDGSTFKATVE 137

Query: 84   FRPYFYAATKEKMEMDVEAYLRR-RYESQIADIEILEKEDLDLKNHLSGLHKSYLKISFD 142
            + PYF  A ++  E +VE + +R   E  +  ++ +EKEDL + NHL G  ++++++ F 
Sbjct: 138  YEPYFLIACRKGHEGEVEEWCKRVPGEGVVKGMKRVEKEDLKMPNHLLGYRRTFIELRFH 197

Query: 143  TVQQLMDVKKDLLHVVERNQAKFDAAEAYESILTGK----------------REQRPQDF 186
             VQ L+  ++D++ + E+N+   DA + Y  + T                        + 
Sbjct: 198  NVQDLLAARRDIMPIAEKNKKGMDAMDTYAEVATANGNFDLFDDDPRTDDRRNNASFAEA 257

Query: 187  LDCIVDLREYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLLEKRVDLLQRAEVHVCAFDI 246
             D IVD+REYDVPYH+R  ID D+R G WY V   +    + +  + L  A+  V AFDI
Sbjct: 258  SDFIVDIREYDVPYHVRVMIDLDIRVGNWYFVEAKNGVTTIIRNEERLAPADPVVMAFDI 317

Query: 247  ETTKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTN 306
            ET K PLKFPD+  D IMM+SYM+DGQG+LI NRE V  DI+D +Y PKPE+ G F + N
Sbjct: 318  ETCKAPLKFPDSAVDQIMMVSYMIDGQGFLITNREIVSADIDDFDYHPKPEYPGPFMIFN 377

Query: 307  VNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDKNQG 366
              +E  L+  +F H++E +P +  TYNGD+FDWPF+E RA+ +G  M  E+G++ D ++ 
Sbjct: 378  EPDEKALIERFFLHIKEARPTVIATYNGDFFDWPFVEARASFNGIDMYHEIGWKKD-SED 436

Query: 367  ECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQMM 426
            + +  ++ H+DCF WV RDSYLPQGS+GLKAVT AKLGYDP E++PE M  +A E+PQ +
Sbjct: 437  QFKCNYSVHMDCFHWVNRDSYLPQGSRGLKAVTVAKLGYDPDELDPELMTPYANERPQTL 496

Query: 427  ASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVI 486
            A YSVSDAVATYYLYM YVHPFIFSL TI+P+ PD+ LRKG+GTLCEMLLMVQAY+  ++
Sbjct: 497  AEYSVSDAVATYYLYMKYVHPFIFSLCTILPLGPDDTLRKGTGTLCEMLLMVQAYQKEIV 556

Query: 487  CPNKHQSDPEKFYRNHLLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQLLNNLDR 546
             PNKH +  E F+  HLL+SETY+GGHVE +E+GVFR+D+P +F +DP A ++LL +LD 
Sbjct: 557  LPNKHMAPKEAFWDGHLLDSETYVGGHVESIEAGVFRADIPVNFAVDPGAIDELLRDLDS 616

Query: 547  DLQYAIKVEGKMDLESVSNYDEVKNAIMEKLLRLQEEPIREECPLIYHLDVAAMYPNIIL 606
             L ++I VE K  ++ ++NY+E+K  I EKLL L+  P R E PLIYHLDVA+MYPNI+ 
Sbjct: 617  ALTFSITVEEKKSMDDITNYEEIKQQITEKLLDLKNTPNRSERPLIYHLDVASMYPNIMT 676

Query: 607  TNRLQPPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYYHLKKQIESEFVD 666
            TNRLQP S++++  C ACDFNRPGKTC R++ W WRGE    KR +Y  ++  +E+E   
Sbjct: 677  TNRLQPDSMISESDCAACDFNRPGKTCDRRMPWAWRGEYLPAKRDEYNMIRHALENEKFP 736

Query: 667  G--TNGHLSKSFLDLPKMEQQSRLKDRLKKYCQKAYKRVLDKPVTELREAGICMRENSFY 724
            G   N  L +S+ DL   EQ +  K R++ Y QK Y ++ D   T +REA IC REN FY
Sbjct: 737  GKFANSPL-RSWQDLSLDEQTTLTKKRMQLYSQKVYHKIRDS-TTIVREAIICQRENPFY 794

Query: 725  VDTVRSFRDRRYEYKGLNKVWKGKLSEAKASGN-SIKIQEAQDMVVLYDSLQLAHKCILN 783
            ++TVR FRDRRY+YKG  KVWKGK    K+SG  + ++  A+ M++L+DSLQLAHK ILN
Sbjct: 795  INTVRDFRDRRYDYKGKAKVWKGKTDALKSSGAPASEVDGAKKMIILFDSLQLAHKVILN 854

Query: 784  SFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLPGSFP 843
            SFYGYVMRKG+RWYSMEMAGV   TGA IIQ AR L+E++G+PLELDTDGIWC+LP +FP
Sbjct: 855  SFYGYVMRKGSRWYSMEMAGVTCLTGATIIQLARSLVERLGRPLELDTDGIWCMLPATFP 914

Query: 844  ENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEFEVD 903
            ENF FK K+  KKL ISYPCVMLN  V    TN QYQTLVDP +  YETHS+ SI FEVD
Sbjct: 915  ENFAFKLKN-GKKLAISYPCVMLNHLVHAKFTNHQYQTLVDPKTFKYETHSDNSIFFEVD 973

Query: 904  GPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFL 963
            GPYKAMILP SKEE   +KKRYAVFNDDG+LAELKGFE+KRRGELKLIK+FQ ++F  FL
Sbjct: 974  GPYKAMILPTSKEEDKNLKKRYAVFNDDGSLAELKGFEVKRRGELKLIKIFQQQIFKFFL 1033

Query: 964  HGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLADYGEQKSCAV 1023
             G+T+ ECY AVA VAN+WLD+L ++G  +AD EL+D ISE+ +M+K+L +YG QKS ++
Sbjct: 1034 EGTTLAECYGAVAKVANQWLDVLHSKGVTLADEELMDLISENRSMTKTLEEYGSQKSTSI 1093

Query: 1024 TTARRLSDFLGDTMVKDKGLRCQYIVACEPQGTPVSERAVPVAIFETDAEIMKFYLRKWC 1083
            TTA+RL+DFLG+ MVKDKGL C++I+   P+  PV+ERAVPVAIF  + E  + YL+KW 
Sbjct: 1094 TTAKRLADFLGEGMVKDKGLNCKFIICARPKSAPVTERAVPVAIFSAEEETKRLYLKKWL 1153

Query: 1084 KTS-SDVGIRSIVDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLYKKVREKE 1142
            K   +D   R+++DW YY +RL S IQK+ITIPAA+QKV NPVPRV HPDWL +++  K+
Sbjct: 1154 KEEPADTDPRALLDWDYYTERLGSVIQKLITIPAALQKVRNPVPRVPHPDWLQRRINIKD 1213

Query: 1143 DKFRQRKLVDIFSSLKKDDFLNKTCNAETNLMDENVEDLEDFPKKRRNSVNGPRPIVRCF 1202
            DK +Q+KL D+F    K   L +      NL+ + VED+                     
Sbjct: 1214 DKMKQKKLTDLFGPTSKGGPLEEIA---PNLLGD-VEDIGAL------------------ 1251

Query: 1203 EVNNEQKTVKTTDQVDSLRQQLEPSEVSDQQPSSQNAIDTENIDRIVDYKGWLELKKRKW 1262
                                 L+P  VS    +SQ      +  R  DY  +LE +K KW
Sbjct: 1252 ---------------------LKPKTVSSAISASQKTQAPRSQKRNEDYPAFLEYQKLKW 1290

Query: 1263 K--DNLDRRKKQKLGSLRASHQANGVSESLGDMINHKEAQRRTGVGSYFRRQETAMTRCH 1320
            K       R++   G  R++ Q+N                    +   FR Q     R  
Sbjct: 1291 KLQKQARARRRHLFGDRRSNLQSN--------------------IQQTFRNQAEITFRNT 1330

Query: 1321 WQIIQLVPSSQSGVFLAWVVVEGIMVRIPITVPRLFYLNSK-----DPIVEKFPGRRVNK 1375
            WQ++QL  +   G+ LA+V+++G +  + + VPR  +LN K     D  VE     +V  
Sbjct: 1331 WQVLQLRTTDSPGIVLAYVLIDGKIHAVKVNVPRQVFLNLKSKELPDIEVEGCHVEQVYH 1390

Query: 1376 TLPHGRRSFNLIEVMIDEDQFRKESKKLAALLADPEVE 1413
            TLP+G  S +L ++ + E+ +  E++K + L   P VE
Sbjct: 1391 TLPNGHSSVHLFKLTVPEEIYFAEAEKFSLLFNHPSVE 1428



 Score =  239 bits (610), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 153/549 (27%), Positives = 265/549 (48%), Gaps = 58/549 (10%)

Query: 1448 ILWISDDGVPDLGGTSEEDECFA-DEVHQPVLTYPGAYRKVSVELKIHHLSVNALLKSNQ 1506
            +LW SD   PD  G  ++D     D+V  P +  PG +  V ++L++ +L++N +L S+ 
Sbjct: 1645 VLWWSDSPRPDHAGYEKDDVAGPLDQVQMPSVNNPGTFASVCIDLEVRNLAINTILTSSL 1704

Query: 1507 VNEMEGGGLFGFDQDMNSGPYNNELCGFDETTSSAPAFRVVKQLIQRCLTDAVTSGNVFA 1566
            +NE+EG     F+   + G   NE    D   ++A   +V++++++    +A   G+  A
Sbjct: 1705 INELEGADAISFNPSGDGGADGNEALFADNAFANA-GVQVLREMVKSWWAEAC-KGSTMA 1762

Query: 1567 DAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEFRKLGATIIFANFSKVIID 1626
            D ++QHL RW+ SP S L+D  LH  +  + +K    L+A+FR++G+ +I+A+ +++++ 
Sbjct: 1763 DVMVQHLVRWVESPASCLYDRALHYYVQMMSRKALLQLMADFRRVGSQVIYASPNRLLLQ 1822

Query: 1627 TGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLFMDQYNYGGIPARADESLD 1686
            T K ++  A AY   +LK+++ + LF +I+LE   +W  L++ D++NYGG      E ++
Sbjct: 1823 TTKSEVGNAYAYAQYILKSIKGKPLFHFIDLEIKEYWDYLVWYDEFNYGG--KACQEVVE 1880

Query: 1687 DDSQ-VDIVSSWNIAEYLPKEIQDHFVLVVSEFMYIPWKHAQKLAASRASLQEGSSCTPS 1745
             D Q + ++  W +A +LP  +Q  F   V EF+ +   H+ K    R       + TP 
Sbjct: 1881 QDEQDLQMIMHWQMATFLPIRLQPTFRDWVVEFIEL--MHSIK----RPPTGSDPTATPR 1934

Query: 1746 IT-------VAAAENFESHIV------QYVKGEISSYFTGKLLSIVRDAI---------- 1782
            +T          AE+  + I+      + +K EI+S    +   ++   +          
Sbjct: 1935 LTQLPIRNNAGLAEDAPNQIILGNAFEKPLKKEITSLIATQKRELLHPELAADYTFPSLP 1994

Query: 1783 -HHMKKMNNDQHNSPGVMQTAAN---IHKVDAPLEFIKHVCAAFALDQNVQHDVLVMRKN 1838
              H+ ++      + G      N       +  LE +K +    +LD+N+  +  ++RK 
Sbjct: 1995 GSHLAQLTPQSTTTSGSTHKKNNNKPTASANPILELVKSLMQVLSLDKNITLEARLLRKE 2054

Query: 1839 LLKYVRVREFAPEAEFRDPCPSFILPNVICSYCNDCRDLDLCRDMALLAQ---------- 1888
            LL    VREF+ E  F++P  S  L  + C  C   RDLDLCRD  LL            
Sbjct: 2055 LLTLFEVREFSREGTFQNPSESLRLAQLSCDSCTMARDLDLCRDEDLLPASVTGETGAGG 2114

Query: 1889 -------DWHCAMPQCGQPYDREVMENALLQIVRQRERLYHLQDLVCIRCNQVKAAHLAE 1941
                    W C    C Q YDR  +E  LL  V+     +  QDL C RC  ++     E
Sbjct: 2115 AADEGAWSWRCGY--CEQEYDRNEVEERLLGDVQGLVVQWSTQDLKCARCGALRVNEFME 2172

Query: 1942 QCACAGSFR 1950
             C C+G ++
Sbjct: 2173 HCTCSGEWK 2181


>gi|321461276|gb|EFX72310.1| hypothetical protein DAPPUDRAFT_227571 [Daphnia pulex]
          Length = 2241

 Score = 1334 bits (3453), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 683/1402 (48%), Positives = 952/1402 (67%), Gaps = 52/1402 (3%)

Query: 27   LEAKLGYDLFSEGDKRLGWLLTFASSSLEDEDTRKVYSCIDLYFVSQDGSTFKSKYKFRP 86
            ++ K G+    E  +++G+L+   ++ + D   +++ S +D YFV +DGS FK+   F+P
Sbjct: 40   IDEKYGFFTPKESGEKIGYLVNMHTTEIFDA-AQQLISAVDYYFVQEDGSRFKASLPFKP 98

Query: 87   YFYAATKEKMEMDVEAYLRRRYESQIADIEILEKEDLDLKNHLSGLHKSYLKISFDTVQQ 146
            YFY   K++   +V ++L ++Y   IA IE   KEDLDL NHL GL ++YLK+SF +V  
Sbjct: 99   YFYILPKKECIQEVSSFLGKKYAGIIASIEQCSKEDLDLSNHLVGLKQTYLKLSFLSVTD 158

Query: 147  LMDVKKDLLHVVERNQAKFDAAEAYESILTGKREQRPQ--------DFLDCIVDLREYDV 198
            LM V+K+++    +N ++ ++A  Y  ++   + +  Q        D +D I+D+REYDV
Sbjct: 159  LMKVRKEIMPHARKNSSQTNSA--YSEMMAKFQNEAAQEESDKKVGDTMDNIIDIREYDV 216

Query: 199  PYHIRFAIDNDVRCGQWYDVSISSTGPL-LEKRVDLLQRAEVHVCAFDIETTKLPLKFPD 257
            PYHIR +ID ++  G WY +    +  + + +R D++   +  V AFDIETTKLPLKFPD
Sbjct: 217  PYHIRVSIDMNICVGLWYAIKFKGSETISITRREDIIDTPDTIVLAFDIETTKLPLKFPD 276

Query: 258  ADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNVNNEIELLRLW 317
               D I MISYM+DGQGYLI NRE V  D+ED EYTPKPEFEG F V N  NE+ L++ +
Sbjct: 277  PATDQIFMISYMIDGQGYLITNREIVAADVEDFEYTPKPEFEGPFIVFNEPNEVSLIQRF 336

Query: 318  FAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDKNQGECRAKFACHLD 377
              H+ EVKP I VTYNGD+FDW F+E RA  H   +++  G++ DK +G    + + H+D
Sbjct: 337  LDHVIEVKPHIIVTYNGDFFDWSFVEARATFHDMNVAKMTGWERDK-EGVYSCRPSIHMD 395

Query: 378  CFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQMMASYSVSDAVAT 437
            CF WVKRDSYLP GSQ LKAV KAKL YDP+E++PEDM R A E+PQ+MA+YSVSDAVAT
Sbjct: 396  CFNWVKRDSYLPVGSQNLKAVAKAKLRYDPVELDPEDMCRMAAEQPQVMANYSVSDAVAT 455

Query: 438  YYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVICPNKHQSDPEK 497
            YYLYM YVHPFIF+L TIIPM PDEVLRKGSGTLCE LLMV+A++AN+I PNK  S  + 
Sbjct: 456  YYLYMKYVHPFIFALCTIIPMEPDEVLRKGSGTLCESLLMVEAFRANIIFPNKQVSLLQN 515

Query: 498  FYRN-HLLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQLLNNLDRDLQYAIKVEG 556
            +  + HLL++ETY+GGHVE LESGVFRSD+P  F+L P A++ L+  ++R +++A++ E 
Sbjct: 516  WTDDGHLLDTETYVGGHVEALESGVFRSDIPCRFRLIPQAFDSLIEGIERTIKHAVEEEE 575

Query: 557  KMDLESVSNYDEVKNAIMEKLLRLQEEPIREECPLIYHLDVAAMYPNIILTNRLQPPSIV 616
             + +E V+N DEV + I EKL  L++ P R E P+IYHLDV AMYPNIILTNRLQP ++V
Sbjct: 576  HVPIEEVTNLDEVIDDIKEKLCSLRDAPNRIELPVIYHLDVGAMYPNIILTNRLQPSAMV 635

Query: 617  TDEVCTACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYYHLKKQIESE-FVDGTNGHLSKS 675
             + VC +CDFN+P   C R + W+WRG+     R ++  +++Q+E+E F     G  +++
Sbjct: 636  DESVCASCDFNQPEAQCQRSMSWMWRGDFMPATRGEFQRIQQQLENEKFPPVIPGMPTRA 695

Query: 676  FLDLPKMEQQSRLKDRLKKYCQKAYKRVLDKPVTELREAGICMRENSFYVDTVRSFRDRR 735
            F  LP+ EQ ++ K RL +YC+KAYK+V     TE R+  +C +ENSFYVDTVR+FRDRR
Sbjct: 696  FHQLPREEQSAKEKQRLSEYCRKAYKKV-RVTRTEERQQTVCQKENSFYVDTVRAFRDRR 754

Query: 736  YEYKGLNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHKCILNSFYGYVMRKGAR 795
            YEYK LNK  K +++EA A G++ +I+ A++  VLYDSLQLAHKCILNSFYGYVMRKGAR
Sbjct: 755  YEYKNLNKTAKKQIAEAIALGDAGEIKSAKNREVLYDSLQLAHKCILNSFYGYVMRKGAR 814

Query: 796  WYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLPGSFPENFTFKTKDLKK 855
            W+SMEMAG+V +TGA II+ AR LIE++G+PLELDTDGIWC+LP SFPEN+  KT  LKK
Sbjct: 815  WHSMEMAGIVCHTGAGIIRKARELIEQVGRPLELDTDGIWCMLPSSFPENYVIKTSSLKK 874

Query: 856  -KLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEFEVDGPYKAMILPAS 914
             K+TISYP  +LNV V    TN+QY  LVDP + +Y    E SI FEVDGPY AMILPAS
Sbjct: 875  PKITISYPGAVLNVMVKDAFTNNQYHELVDPETLSYLQRDENSIFFEVDGPYLAMILPAS 934

Query: 915  KEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFLHGSTIEECYSA 974
            KEEG  +KKRYAVFN DG+LAELKGFE+KRRGEL+LIK+FQ+ +F+ FL G T+E CY A
Sbjct: 935  KEEGKKLKKRYAVFNFDGSLAELKGFEVKRRGELQLIKIFQSSVFEAFLKGDTLETCYQA 994

Query: 975  VAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLADYGEQKSCAVTTARRLSDFLG 1034
            VA +A+ WLD+L ++ +++ DSEL + I+E+ +MS+ L +YG QKS +++TA+RL++FLG
Sbjct: 995  VAKIADYWLDVLYSKAENLPDSELFELITENRSMSRKLEEYGGQKSTSISTAKRLAEFLG 1054

Query: 1035 DTMVKDKGLRCQYIVACEPQGTPVSERAVPVAIFETDAEIMKFYLRKWCKTSS--DVGIR 1092
            D MVKD GL C++I++ +P+G PV++RA+P+AIF+++  + + YL+KW K +S  D  IR
Sbjct: 1055 DQMVKDAGLSCRFIISKKPEGAPVTDRAIPLAIFQSEPSVKRHYLKKWLKDNSMTDFDIR 1114

Query: 1093 SIVDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLYKKVREKEDKFRQRKLVD 1152
            +I+DW+YY +RL   IQKIITIPAA+Q V+NPVPRV HPDWL+K++ EK D  +QR++ +
Sbjct: 1115 TILDWNYYIERLGGCIQKIITIPAALQGVANPVPRVQHPDWLHKRMLEKNDVLKQRRINE 1174

Query: 1153 IFSSLKKDDFLNKTCNAETNLMD-ENVEDLEDFPKKRRNSVNGPRPIVRCFEVNNEQKTV 1211
            IF          K    ++N  D   V D+ED    +    N  RP V       ++ T 
Sbjct: 1175 IFK------VSIKPVGDDSNSQDLGEVGDIEDLGGSKNTENN--RPTVTS---KRKRGTS 1223

Query: 1212 KTTDQVDSLRQQLEPSEVSDQQPSSQNAIDTENIDRIVDYKGWLELKKRKWKDNLDRRKK 1271
            ++ +Q+D   +++        +P  +  I             W+   K+KW   L +R  
Sbjct: 1224 ESANQLDKNWREILGPPPPMGKPGEEREI-------------WIRYHKKKWAIQLKQRAA 1270

Query: 1272 QKLGSLRASHQANGVSESLGDMINHKEAQRRTGVGSYFRRQETAMTRCHWQIIQLVPSSQ 1331
            ++ G  + S+  +    + G   N      RT +G + RR +  +    WQI+Q++ +SQ
Sbjct: 1271 RR-GREQNSNTGSASVSTFGG--NSGAGVLRTNLGGFLRRAQQTLLSSMWQILQVMETSQ 1327

Query: 1332 SGVFLAWVVVEGIMVRIPITVPRLFYLNSKDPI-----VEKFPGRRVNKTLPHGRRSFNL 1386
             G+F  W +V   + +I +TVPR+FYLN K P+      E    R+VN+ LP   R +NL
Sbjct: 1328 PGMFRLWALVGNELHQIRLTVPRIFYLNKKKPLEKEASSESAVWRKVNRILPRSHRVYNL 1387

Query: 1387 IEVMIDEDQFRKESKKLAALLA 1408
             E  + E+ +++   +L A L+
Sbjct: 1388 YEYSVPEEVYQQNFNQLMADLS 1409



 Score =  305 bits (780), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 183/580 (31%), Positives = 297/580 (51%), Gaps = 49/580 (8%)

Query: 1442 LARYAHILWISDDGVPDLGGTSEEDECFADEVHQP----VLTYPGAYRKVSVELKIHHLS 1497
            L R   ILW S    PDLGG   +D     E+       V+  PG Y  V VE+ +  L+
Sbjct: 1671 LIRNNCILWCSPTERPDLGGKEADDNRLVTEIEDATTTLVVNNPGVYTNVCVEMDVDALA 1730

Query: 1498 VNALLKSNQVNEMEG-GGLFGFD------QDMNSGPYNNELCGFDETTSSAPAFRVVKQL 1550
            V  LL+S+QV ++EG      FD      +DM +  +  EL  + E+      FRV+K +
Sbjct: 1731 VTTLLQSHQVLDVEGTSSSTAFDVPQVSLKDMLNDNHTAELSSYSESAMCVTVFRVLKSV 1790

Query: 1551 IQRCLTDAVTSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEFRK 1610
            +   L D     NVFAD  + H YRWL SP + L+DP L R+L  +M+K F  LLAEF++
Sbjct: 1791 VASWLRDISVHRNVFADFQVIHFYRWLRSPTALLYDPALRRMLQNLMRKYFVQLLAEFQR 1850

Query: 1611 LGATIIFANFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLFMD 1670
            LGAT+++A+F ++++ T K  +  A +Y   +  +L  +ELF  +EL   H W  L+++D
Sbjct: 1851 LGATVVYADFGRIVLGTKKRRIPDALSYVSFVCASLHQKELFRSLELNVQHCWQLLVWLD 1910

Query: 1671 QYNYGGIPARADESL--------------DDDSQVDIVSSWNIAEYLPKE--IQDHFVLV 1714
              NYGG+  ++D                 +++    +  +W++ +Y P+E   Q++F  V
Sbjct: 1911 PANYGGVKGKSDSEKENEENNEDRSFVEDEEEESTAVEMNWDVVKYFPEEPPCQEYFNTV 1970

Query: 1715 VSEFMYIPWKHAQKLAASRASLQEGSSCTPSITVAAAENFESHIVQYVKGEISSYFTGKL 1774
            ++ ++     H  +    R         TP   + +++   S +      +    FT +L
Sbjct: 1971 IATYISAIHDHLAETYGDRI-----PGATPVRRIRSSQTQRSKVGP--TPDSLKEFTREL 2023

Query: 1775 L--SIVRDAIHHMKKMNNDQHNSPGVMQTAANIHKVDAPLEFIKHVCAAFALDQNVQHDV 1832
            +   I +     ++K++       G     +N       LEF+K VC  F LD N+  +V
Sbjct: 2024 VDQEIAQHLFRVVQKLHKQLQGHHGTENGLSN-----PSLEFVKAVCRVFQLDVNIVDEV 2078

Query: 1833 LVMRKNLLKYVRVREFAPEAEFRDPCPSFILPNVICSYCNDCRDLDLCRDMALLAQD--- 1889
              +R+NLLK + V EF+ EA+++D C S++LP VIC  CN CRD+DLCRD    ++D   
Sbjct: 2079 TRLRRNLLKLIGVGEFSQEADWKDSCLSYVLPEVICPTCNHCRDIDLCRD-PHESEDRGI 2137

Query: 1890 --WHCAMPQCGQPYDREVMENALLQIVRQRERLYHLQDLVCIRCNQVKAAHLAEQCACAG 1947
              W C  P C   YD   +E+ LL +V ++   + LQDL C +C Q+K  +L++ C+CAG
Sbjct: 2138 PTWQC--PLCKSSYDSTEIESMLLDVVNRKTMSFVLQDLQCKKCKQIKRENLSQFCSCAG 2195

Query: 1948 SFRCKEDASDFRSKMQIFLNIANRQGFQLLQECTSWILEV 1987
             F+  + ++     + IF  ++ + G  LL E    +L++
Sbjct: 2196 EFQLLQSSTGLLQTLSIFERVSRKFGLTLLHETVEQLLKM 2235


>gi|270010224|gb|EFA06672.1| hypothetical protein TcasGA2_TC009600 [Tribolium castaneum]
          Length = 2191

 Score = 1334 bits (3452), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 690/1432 (48%), Positives = 951/1432 (66%), Gaps = 74/1432 (5%)

Query: 6    WDRQDGRRTKKQKLIRSAEEELEAKLGYDLFSEGDKRLGWLLTFASSSLEDEDTRKVYSC 65
            + R++    + +++I +  + ++AK G++   +  +R G+LL   +S + DED R V + 
Sbjct: 23   FSREETSEVRLRQVIEN--DAIDAKYGFERVRDNLERTGFLLNMHASEILDEDKRLV-AA 79

Query: 66   IDLYFVSQDGSTFKSKYKFRPYFYAATKEKMEMDVEAYLRRRYESQIADIEILEKEDLDL 125
            +D YF+ +DG+ FK  Y + PYFY  TK ++  +V  +L +++   I  IE++ KEDLDL
Sbjct: 80   VDFYFMEEDGARFKVSYCYMPYFYILTKIELIQEVSQFLTKKFSGTIGKIEVVTKEDLDL 139

Query: 126  KNHLSGLHKSYLKISFDTVQQLMDVKKDLLHVVERNQAKFDAAEAYESILT-------GK 178
             NHL GL + Y+K+SF     L+ V+K++L VV++N+ +  +   Y  +LT        +
Sbjct: 140  PNHLIGLQQKYIKLSFFNQTDLIKVRKEILKVVKKNKERESSNTYYTEMLTDILADKAAQ 199

Query: 179  REQRPQDFLDCIVDLREYDVPYHIRFAIDNDVRCGQWYDV---SISSTGPLLEKRVDLLQ 235
              +   D ++ I+D+REYDVPYH+R +ID  + CG WY V     ++  P++  R DL++
Sbjct: 200  TTKTNTDQMENILDIREYDVPYHVRVSIDLKIFCGLWYTVKCKGATTEPPVITLRPDLIE 259

Query: 236  RAEVHVCAFDIETTKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPK 295
            R E  V AFDIETTKLPLKFPDA  D IMMISYM+DGQG+LI NRE +  DIED EYTPK
Sbjct: 260  RPEPIVLAFDIETTKLPLKFPDAQTDQIMMISYMIDGQGFLITNREILSSDIEDFEYTPK 319

Query: 296  PEFEGYFKVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSE 355
            PEFEG F + N  NE+ L++ +F H+ +V+P ++VTYNGD+FDWPF+ETRAA +   M +
Sbjct: 320  PEFEGKFTIFNEPNELALIQKFFDHIMDVRPHVFVTYNGDFFDWPFVETRAAVYDLDMKQ 379

Query: 356  ELGFQCDKNQG-ECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPED 414
            E+GF  D+N    CR   A H+DC  WVKRDSYLP GS  LKAV KAKL YDP+E++PE+
Sbjct: 380  EIGFAKDRNDVYSCRP--AIHMDCLCWVKRDSYLPVGSHNLKAVAKAKLRYDPVELDPEE 437

Query: 415  MVRFAKEKPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEM 474
            M   A  +PQ++++YSVSDAVATYYLYM YVHPFIF+L TIIP  PDEVLRKGSGTLCE 
Sbjct: 438  MCPLAASQPQVLSNYSVSDAVATYYLYMQYVHPFIFALCTIIPCEPDEVLRKGSGTLCEA 497

Query: 475  LLMVQAYKANVICPNKHQSDPEKFYRN-HLLESETYIGGHVECLESGVFRSDLPTSFKLD 533
            LLMV+A+  N+I PNK ++   K   + H+L  ETY+GGHVE LESGVFR+D+P  F+L+
Sbjct: 498  LLMVEAFHCNIIFPNKEETVLNKLTDDGHVLHQETYVGGHVEALESGVFRADIPCRFRLE 557

Query: 534  PSAYEQLLNNLDRDLQYAIKVEGKMDLESVSNYDEVKNAIMEKLLRLQEEPIREECPLIY 593
              A  +L+  + + L +AI++E  + L  V+N +EV N I+ KL  L+E+P+R E PLIY
Sbjct: 558  TDALNKLIEQVPKTLAHAIEIEEGVPLTDVTNLEEVTNEIVAKLTSLKEQPMRLERPLIY 617

Query: 594  HLDVAAMYPNIILTNRLQPPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEIFMGKRSDY 653
            HLDV AMYPNIILTNRLQP +IV + +C ACD+N+ G  C R + W+WR E     R++Y
Sbjct: 618  HLDVGAMYPNIILTNRLQPCAIVDETICAACDYNKLGARCQRNMAWMWRAEYMPASRNEY 677

Query: 654  YHLKKQIESE-FVDGTNGHLSKSFLDLPKMEQQSRLKDRLKKYCQKAYKRVLDKPVTELR 712
            + +++Q+E+E F     G   ++F  L K EQ    K RL  YC+K YK+     + E R
Sbjct: 678  HRIQQQLETEKFPPQYPGGPQRAFHQLTKQEQADLEKKRLTVYCRKVYKKAKVTKIEE-R 736

Query: 713  EAGICMRENSFYVDTVRSFRDRRYEYKGLNKVWKGKLSEAKASGNSIKIQEAQDMVVLYD 772
               IC +ENSFYVDTVR+FRDRRYEYKGL+K  K  ++ A   G++ +I+ A++  VLYD
Sbjct: 737  TTTICQKENSFYVDTVRAFRDRRYEYKGLSKKAKQAVAAAIKGGDASEIKSAKNREVLYD 796

Query: 773  SLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTD 832
            SLQLAHKCILNSFYGYVMR+GARW+SMEMAG+V YTGA II  AR +IEK+G+PLELDTD
Sbjct: 797  SLQLAHKCILNSFYGYVMRRGARWHSMEMAGIVCYTGANIIMRAREIIEKVGRPLELDTD 856

Query: 833  GIWCVLPGSFPENFTFKTKDLKK-KLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYE 891
            GIWC+LP SFPENF  +T   KK K+ +SYP  +LN  V  + TNDQY  LVD  S  YE
Sbjct: 857  GIWCILPASFPENFVVRTNHEKKNKIVVSYPNAVLNAMVKEHFTNDQYHELVDAQSLKYE 916

Query: 892  THSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLI 951
              SE SI FEVDGPYKAM+LPASKEEG  +KKRYAVFN DGTLAELKGFE+KRRGEL+LI
Sbjct: 917  ERSENSIFFEVDGPYKAMVLPASKEEGKKLKKRYAVFNFDGTLAELKGFEVKRRGELQLI 976

Query: 952  KVFQAELFDKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKS 1011
            K FQ+ +F+ FL G T+E CY+AVA +A+ WLD+L + G+++ DSEL D ISE+ +MSK 
Sbjct: 977  KNFQSSVFEAFLKGDTLESCYAAVAQIADYWLDVLFSHGRNMPDSELFDLISENRSMSKK 1036

Query: 1012 LADYGEQKSCAVTTARRLSDFLGDTMVKDKGLRCQYIVACEPQGTPVSERAVPVAIFETD 1071
            L +YG QKS +++TA+RL++FLGD MVKD GL C+Y+++ +P G PV+ERA+P+AIF+++
Sbjct: 1037 LEEYGGQKSTSISTAKRLAEFLGDQMVKDAGLACKYVISKKPDGAPVTERAIPLAIFQSE 1096

Query: 1072 AEIMKFYLRKWCKTSS--DVGIRSIVDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVV 1129
              + ++YLRKW K +S  +V IR I+DW+YY +RL  AIQKIITIPAAMQ V NPVPRV 
Sbjct: 1097 VSVQRYYLRKWLKDNSINEVDIREILDWNYYIERLGGAIQKIITIPAAMQGVPNPVPRVR 1156

Query: 1130 HPDWLYKKVREKEDKFRQRKLVDIFSSLKKDDFLNKTCNAETNLMDENVEDLEDFPKKRR 1189
            HPDWL+KK+ EK D F+QR++ D+F++  K                + + D+EDF     
Sbjct: 1157 HPDWLHKKMLEKNDTFKQRRITDMFAACPK---------------PQTLPDIEDFGG--- 1198

Query: 1190 NSVNGPRPIV----RCFEVNNEQKTVKTTDQVDSLRQQLEPSEVSDQQPSSQNAIDTENI 1245
             S    RPIV    R  + + E ++  T + +    +++  +      P        E++
Sbjct: 1199 TSSTDKRPIVTTIKRKRDSDKESESGFTEEDLSKTWREVMGN------PPPYGTTKEEHL 1252

Query: 1246 DRIVDYKGWLELKKRKWKDNLDRRKKQKLGSLRASHQANGVSESLGDMINHKEAQRRTGV 1305
                    W+  +KRKW     +R +      +A   A+ +  ++            TG 
Sbjct: 1253 -------AWITFQKRKWLFQAMQRAQGTRNRKKAKSSASVLRSTV------------TGT 1293

Query: 1306 GSYF--RRQETAMTRCHWQIIQLVPSSQSGVFLAWVVVEGIMVRIPITVPRLFYLNSKDP 1363
             S F  + Q+T +T   WQ+IQ+ P+  +G +  W ++   + +I + VPR+FY N K+ 
Sbjct: 1294 LSGFLQKAQKTLLT-VPWQVIQVAPTPVAGEYKLWALILNELHQIKLVVPRIFYANLKES 1352

Query: 1364 IV--EKFPGRRVNKTLPHGRRSFNLIEVMIDEDQFRKESKKLAALLADPEVE 1413
             V  E    ++ N+TLP  R+ +NL    + E+ F++  +KL     DP VE
Sbjct: 1353 KVVEEGALFKKCNRTLPRTRQVYNLYMYSVPEEVFQEHGRKLYLDQTDPNVE 1404



 Score =  289 bits (740), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 178/566 (31%), Positives = 285/566 (50%), Gaps = 49/566 (8%)

Query: 1442 LARYAHILWISDDGVPDLGGTSEEDECFADEVHQ---PVLTYPGAYRKVSVELKIHHLSV 1498
            L ++ H+LW S    PDLGG  E D     E  +    V   PG Y  V +EL +  L++
Sbjct: 1654 LTKHNHVLWCSPTDKPDLGGVEENDSRLLAENQEGSSEVCNVPGWYSSVCIELDVDCLAI 1713

Query: 1499 NALLKSNQVNEMEGG---------GLFGFDQDMNSGPYNNELCGFDETTSSAPAFRVVKQ 1549
            N LL+S+ V ++EG          G    D  +   P       +DET   A AF++++ 
Sbjct: 1714 NTLLQSHHVTDIEGTSSATAFDGVGATSLDDLVGDNP-----TVYDETARCAEAFKILRT 1768

Query: 1550 LIQRCLTDAVTSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEFR 1609
            +    + D     N+FAD  + H YRWL +P + L+DP L R L  +M+K+F  L+AEF+
Sbjct: 1769 MASIWMRDISLYQNIFADFQVVHFYRWLRAPKALLYDPALLRTLQNLMKKLFLQLVAEFK 1828

Query: 1610 KLGATIIFANFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLFM 1669
            +LG TII+ANF+K++I + K  +  A    + ++ +++ +ELF  +++     W +L+++
Sbjct: 1829 RLGCTIIYANFNKIVICSKKKSVEDAMENVEFVVTSIRNKELFHSLDISFRQCWETLVWL 1888

Query: 1670 DQYNYGGIPARADESL------DDDSQVDIVSSWNIAEYLPKE--IQDHFVLVVSEFMYI 1721
            D  NY G+  +  E L      ++  Q +IV SWN+A+ LP+    + +F  V++   YI
Sbjct: 1889 DPANYAGVQGKLPEDLREEGNEEEKGQSNIVMSWNLAQRLPEAGGCRTNFSAVIAG--YI 1946

Query: 1722 PWKHAQKLAASRASLQEGSSCTPSITVAAAENFESHIVQYVKGEISSYFTGKLLSIVRDA 1781
                 +      +++    S  P+  + A E+    + QY K  +S   T +L  I    
Sbjct: 1947 NATFTKMKETENSTIARAVSSQPTFGIGANED----VRQYAKEILSGEITQELFQITERI 2002

Query: 1782 IHHMKKMNNDQHNSPGVMQTAANIHKVDAPLEFIKHVCAAFALDQNVQHDVLVMRKNLLK 1841
             + +K + +    SP               LEF+K VC    LD  ++  V  ++ NLL+
Sbjct: 2003 NNRLKPLPDG--TSPA--------------LEFVKAVCQVLGLDAALKDTVSHLKANLLR 2046

Query: 1842 YVRVREFAPEAEFRDPCPSFILPNVICSYCNDCRDLDLCRDMALLAQDWHCAMPQCGQPY 1901
             V V EF+ +AE+RD   S+++P VIC  CN CRD+DL RD       W C  P C   Y
Sbjct: 2047 LVGVGEFSEKAEWRDTSVSYVIPQVICKSCNHCRDIDLGRDTHRSEAAWVC--PLCDFAY 2104

Query: 1902 DREVMENALLQIVRQRERLYHLQDLVCIRCNQVKAAHLAEQCACAGSFRCKEDASDFRSK 1961
            D   +E  LL  + ++   Y+LQDL C +C Q+K  +L   C CAG F+C    S+    
Sbjct: 2105 DNGEIELFLLDTINRKFLAYNLQDLQCKKCAQIKLENLVFHCQCAGDFKCLISRSELVKL 2164

Query: 1962 MQIFLNIANRQGFQLLQECTSWILEV 1987
            ++ F  +A+      L+E T  IL++
Sbjct: 2165 IETFHLLADTFNMSALRENTEQILKL 2190


>gi|320590899|gb|EFX03340.1| DNA polymerase catalytic subunit a [Grosmannia clavigera kw1407]
          Length = 2353

 Score = 1333 bits (3451), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 689/1437 (47%), Positives = 939/1437 (65%), Gaps = 74/1437 (5%)

Query: 27   LEAKLGYDLFSEGDKRLGWLLTFASSSLEDE--DTRKVYSCIDLYFV--SQDGS----TF 78
            ++ K+G+  F  G +R GWL+    +S+ED+  +     + +DLYF+    DGS    TF
Sbjct: 58   IDEKMGFARFEAGRRREGWLVNVQPTSIEDDRIEGGGGRAAVDLYFIDSGTDGSDEDTTF 117

Query: 79   KSKYKFRPYFYAATKEKMEMDVEAYLRRRYESQ--IADIEILEKEDLDLKNHLSGLHKSY 136
            K+  ++ PYF  A ++  E +VE + +R       +  I+ +EKEDL + NHL G  +S+
Sbjct: 118  KATVEYEPYFLVAVRKGHETEVEEWCKRVPGGGGLVKRIKRIEKEDLQMPNHLLGFRRSF 177

Query: 137  LKISFDTVQQLMDVKKDLLHVVERNQAKFDAAEAYESILTGKR-----------EQR-PQ 184
            L++ FD VQ L+ V++D+L + ++N+   +A + Y  +                E R P 
Sbjct: 178  LELRFDNVQNLLAVRRDILPIADKNKKGMNAMDTYAEMAASTNAFDLFDDARDDETRLPT 237

Query: 185  DFLDC---IVDLREYDVPYHIRFAIDNDVRCGQWYDV-----SISSTGPLLEKRVDLLQR 236
               D    +VD+REYDVPYH+R  ID D+R G+WY V     ++S T  + EKR   L  
Sbjct: 238  SVADASEFVVDIREYDVPYHVRVLIDMDIRVGKWYFVEAKHGTLSVT--INEKR---LAM 292

Query: 237  AEVHVCAFDIETTKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKP 296
            A+  V A+DIETTKLPLKFPDA  D +MMISYM+DGQG+LI NRE V EDI D EYTP+P
Sbjct: 293  ADPVVMAYDIETTKLPLKFPDAAIDQVMMISYMIDGQGFLITNREIVSEDISDFEYTPRP 352

Query: 297  EFEGYFKVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEE 356
            E++G F + N  +E  +L  +F H++E +P +  TYNGD+FDWPF+E RA+ +G  M  E
Sbjct: 353  EYQGPFMIFNEPDEKAVLERFFLHIKEARPTVIATYNGDFFDWPFVEARASANGIDMYHE 412

Query: 357  LGFQCDKNQGECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMV 416
            +G++ D +  + +  ++ H+DCF WV RDSYLPQGS+GLKAVT AKLGYDP E++PE M 
Sbjct: 413  IGWRRDTDD-QYKCNYSVHMDCFHWVNRDSYLPQGSRGLKAVTVAKLGYDPDELDPELMT 471

Query: 417  RFAKEKPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLL 476
             +A E+PQ +A YSVSDAVATYYLYM YVHPFIFSL TI+P+ PD+VLRKG+GTLCEMLL
Sbjct: 472  PYASERPQTLAEYSVSDAVATYYLYMKYVHPFIFSLCTILPLGPDDVLRKGTGTLCEMLL 531

Query: 477  MVQAYKANVICPNKHQSDPEKFYRNHLLESETYIGGHVECLESGVFRSDLPTSFKLDPSA 536
            MVQAY   ++ PNKH S  E F+  HLL++ETY+GGHVE +E+GVFR+D+P +F +DP A
Sbjct: 532  MVQAYIHEIVLPNKHVSPKEAFWEGHLLDAETYVGGHVESIEAGVFRADIPVNFAVDPKA 591

Query: 537  YEQLLNNLDRDLQYAIKVEGKMDLESVSNYDEVKNAIMEKLLRLQEEPIREECPLIYHLD 596
             ++LL +LD  L+++I +E K  ++ V+NYDEVK  I   L  L++ P R E PLIYHLD
Sbjct: 592  CDELLRDLDAALKFSITIEEKKSMDDVTNYDEVKEQIAACLTTLRDTPNRLERPLIYHLD 651

Query: 597  VAAMYPNIILTNRLQPPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYYHL 656
            VA+MYPNI+ TNRLQP S++ +  C  CDFNRPGKTC R+L W WRGE    KR +Y  +
Sbjct: 652  VASMYPNIMTTNRLQPDSMINESDCATCDFNRPGKTCDRRLPWAWRGEYIPAKRDEYNMI 711

Query: 657  KKQIESEFVDGT-NGHLSKSFLDLPKMEQQSRLKDRLKKYCQKAYKRVLDKPVTELREAG 715
            +  IE+E   G      +++F +LP  EQ + ++ RL+ Y QK Y ++ D   T +REA 
Sbjct: 712  RHAIENEKFPGKYRNAPTRTFQELPADEQAALIRKRLQLYSQKIYHKIHDS-TTIVREAV 770

Query: 716  ICMRENSFYVDTVRSFRDRRYEYKGLNKVWKGKLSEAKASGNS-IKIQEAQDMVVLYDSL 774
            IC REN FY+DTVR FRDRRY+YKG  KVWKGK    K+SG S  ++  A+ M++L+DSL
Sbjct: 771  ICQRENPFYIDTVRDFRDRRYDYKGKAKVWKGKTEALKSSGASAAEVDNAKKMIILFDSL 830

Query: 775  QLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGI 834
            QLAHK ILNSFYGYVMRKG+RWYS+EMAGV   TGA IIQ AR L+E++G+PLELDTDGI
Sbjct: 831  QLAHKVILNSFYGYVMRKGSRWYSLEMAGVTCLTGATIIQMARELVERLGRPLELDTDGI 890

Query: 835  WCVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHS 894
            WC+LP SFPENF FK K+  KKLTISYPCVMLN  V    TN QYQTLVDP +  YETHS
Sbjct: 891  WCMLPSSFPENFAFKLKN-GKKLTISYPCVMLNHLVHARFTNHQYQTLVDPKAFKYETHS 949

Query: 895  ECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVF 954
            + SI FEVDGPYKAM+LP SKEE   +KKRYAVFNDDG+LAELKGFE+KRRGELKLIK+F
Sbjct: 950  DNSIFFEVDGPYKAMVLPTSKEEDKNLKKRYAVFNDDGSLAELKGFEVKRRGELKLIKIF 1009

Query: 955  QAELFDKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLAD 1014
            Q ++F  FL G+T+ ECY+AVA VANRWLD+L ++G  +AD EL++ ISE+ +M+K+L +
Sbjct: 1010 QQQIFKFFLDGTTLAECYAAVAKVANRWLDVLHSKGATLADEELMELISENRSMAKTLEE 1069

Query: 1015 YGEQKSCAVTTARRLSDFLGDTMVKDKGLRCQYIVACEPQGTPVSERAVPVAIFETDAEI 1074
            YG QKS ++TTARRL+DFLG+ MVKDKGL C++I+   P+  PV+ERA+PVAIF  + + 
Sbjct: 1070 YGTQKSTSITTARRLADFLGEQMVKDKGLNCKFIICSRPRNAPVTERAIPVAIFSAEEQT 1129

Query: 1075 MKFYLRKWCKTS-SDVGIRSIVDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDW 1133
             + YL+KW K   +D   R+++DW YY +RL S IQK+ITIPAA+QKV NPVPRV HP+W
Sbjct: 1130 KRQYLKKWFKEEPADTDPRALLDWDYYLERLGSVIQKLITIPAALQKVRNPVPRVAHPEW 1189

Query: 1134 LYKKVREKEDKFRQRKLVDIFSSLKKDDF-----------LNKTCNAETNLMDENVEDLE 1182
            L +++  K+DK +Q+KL D+F++ K               LN    +          D+E
Sbjct: 1190 LQRRINIKDDKMKQKKLTDLFANPKATSISAGGPLGDITNLNNGILSRVTATVTVAADME 1249

Query: 1183 DFPKKRRNSVNGPRPIVRCFEVNNEQKTVKTTDQVDSLRQQLEP-SEVSDQQPSSQNAID 1241
            DF    +N +  P+                  + V   +++  P + V+D       ++ 
Sbjct: 1250 DFGAASQNLLK-PKTTAEAIAGMMAADATAADNAVTVQKRKFPPEAGVADASLDPMASLP 1308

Query: 1242 TENIDRIVDYKGWLELKKRKWKDNLDRRKKQKLGSLRASHQANGVSESLGDMINHKEAQR 1301
                    DY  +L+ +K+KW         QK   +R  H         GD  N    Q+
Sbjct: 1309 KVMPSPSEDYVAFLQYQKKKW-------AIQKQARIRRRHL-------FGDRSN-STLQK 1353

Query: 1302 RTGVGSYFRRQETAMTRCHWQIIQLVPSSQSGVFLAWVVVEGIMVRIPITVPRLFYLNSK 1361
             + +   F+ +     R  WQ++QL  S   G+  A+V+++  +  + I VPR  +LN K
Sbjct: 1354 SSNIQQSFQHRAEITFRNTWQLLQLRLSESPGIVSAFVLIDSRIHSLKIKVPRQVFLNLK 1413

Query: 1362 -----DPIVEKFPGRRVNKTLPHGRRSFNLIEVMIDEDQFRKESKKLAALLADPEVE 1413
                 D  ++     +VN TLP+G  S +L ++ + E+ +  E++K + L   P +E
Sbjct: 1414 SRELPDIEIDGCEVEQVNHTLPNGHSSVHLFKLTVPEEVYFAEAEKFSLLFNHPSIE 1470



 Score =  224 bits (571), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 169/664 (25%), Positives = 291/664 (43%), Gaps = 98/664 (14%)

Query: 1409 DPEVEVLGWQQNAAKIGMQRCAASSQWFNERISLARYAHI-------------------- 1448
            D  +  LGWQ   A+  +    A   W    + LARY  +                    
Sbjct: 1698 DSSLPPLGWQSVVARRLVNHYLALGSWVLHLVGLARYGDVPVCNLERDDPRFIIDVAYAR 1757

Query: 1449 --------LWISDDGVPDLGGTSEEDECFADE-VHQPVLTYPGAYRKVSVELKIHHLSVN 1499
                    LW S    PD  G  ++D     E V  P +  PG +  V +++ + +LS+N
Sbjct: 1758 RLQNNNVVLWWSGSPRPDHAGYEKDDVVGPLETVALPTVNNPGTFASVCIDIDVRNLSIN 1817

Query: 1500 ALLKSNQVNEMEGGGLFGFDQDMNSGPYNNELCG------------FDETTSSAPAFRVV 1547
             +L S+ +NE+EG      D  ++  P  +   G            + E   S  +  V+
Sbjct: 1818 TILTSSLINELEGA-----DAAVSFNPAADAAGGEDGAGDGGSGSLYSENAFSNASILVL 1872

Query: 1548 KQLIQRCLTDAVTSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAE 1607
            +++++    +A   GN  AD ++ +L RW+ +P S L+D  LH  +  + +K F  L+A+
Sbjct: 1873 REMVKAWWAEAC-KGNAMADLVVNNLVRWVENPDSFLYDRALHYYVQMMSRKAFQQLMAD 1931

Query: 1608 FRKLGATIIFANFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLL 1667
            FR++G+ +IFA+ +++++ T K ++  A AY   +LK++++R LF +IE++   +W  L+
Sbjct: 1932 FRRVGSQVIFASANRLLLQTTKAEVDNAYAYSQYVLKSIKSRPLFSFIEMDVKEYWDYLV 1991

Query: 1668 FMDQYNYGGIPARADESLDDDS--QVDIVSSWNIAEYLPKEIQDHFVLVVSEFMYIPWKH 1725
            + D+YNYGG   +  E +   S   ++ +  W +  +LP  +Q  F   V EF+ +   H
Sbjct: 1992 WYDEYNYGGKACQTIEDVPPGSLQPLETIMHWQMNTFLPVRLQPVFSDWVIEFIQL--MH 2049

Query: 1726 AQKLAA-------------SRASLQEGSSCTP-----SITVAAAENFESHIVQYVKG--- 1764
            + K  A               A L+ GSS         I++A   N  S +   + G   
Sbjct: 2050 SLKRPAIADDGSTQRLTQIPLAVLRGGSSSNSQTTLGGISMAGDGNGSSEVGPVILGPKF 2109

Query: 1765 --EISSYFTGKLLSIVRDAIHHMKKMNNDQHNSPGVMQTAANIHKVDAP--------LEF 1814
               +     G + +  R+ +H     + D    PG +  +     V +         LE 
Sbjct: 2110 EKPLKRAIAGLITARNREMLHPELANDYDFPVLPGSLVWSKGTSSVPSKASQSRNPVLEL 2169

Query: 1815 IKHVCAAFALDQNVQHDVLVMRKNLLKYVRVREFAPEAEFRDPCPSFILPNVICSYCNDC 1874
            +K +    +LD+N+  +  ++RK LL    VREF+ E  F++P  S  +  + C  C   
Sbjct: 2170 VKALMQVLSLDKNIAMEARLLRKELLAMFDVREFSREGAFQNPSESLRVSQLSCDNCTMA 2229

Query: 1875 RDLDLCRDMALLAQ-------------DWHCAMPQCGQPYDREVMENALLQIVRQRERLY 1921
            RDLD CRD  LL +              W C    C   YDR  +E  L+  V      +
Sbjct: 2230 RDLDFCRDETLLPELGPDGRRDASSMKPWICTF--CQAEYDRIALEERLVAAVEAIAIEW 2287

Query: 1922 HLQDLVCIRCNQVKAAHLAEQCACAGSFRCKEDASDFRSKMQIFLNIANRQGFQLLQECT 1981
             +QDL C RC  ++     + C C+G +       D  S++ I+ N+A   G ++L +  
Sbjct: 2288 TVQDLKCGRCGALRVNDFMDHCTCSGDWGPTVRREDI-SRLHIYRNVARFYGLRMLGDVV 2346

Query: 1982 SWIL 1985
              +L
Sbjct: 2347 QEVL 2350


>gi|340518945|gb|EGR49185.1| DNA polymerase epsilon, catalytic subunit A [Trichoderma reesei QM6a]
          Length = 2228

 Score = 1333 bits (3451), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 690/1419 (48%), Positives = 930/1419 (65%), Gaps = 77/1419 (5%)

Query: 25   EELEAKLGYDLFSEGDKRLGWLLTFASSSLEDEDTRKVYSCIDLYFVSQDGSTFKSKYKF 84
            + ++ ++G+  +  G K+ GWL+    +S+EDE      + +D YF+  DGSTFK+  ++
Sbjct: 51   QSIDDRMGFARYESGKKKEGWLVNVQPTSVEDERIPGGRAALDCYFIELDGSTFKATVEY 110

Query: 85   RPYFYAATKEKMEMDVEAYLRRRYESQIAD-IEILEKEDLDLKNHLSGLHKSYLKISFDT 143
             PYF  A K+  E +VE +++R     +   I  +EKEDL + NHL G  ++++++ F  
Sbjct: 111  DPYFIIAVKKGRESEVEEWVKRVPGGGVVKAIRRIEKEDLSMPNHLMGYRRTFIELRFAN 170

Query: 144  VQQLMDVKKDLLHVVERNQAKFDAAEAYESILTG-----------KREQRP-----QDFL 187
            V  LM  ++D+L + E+N+   +A +AY  + T            + ++R       +  
Sbjct: 171  VNDLMAARRDILPIAEKNKKNMNAMDAYAEVATNNGNFDLFDNDLRDDERNTSTSISEAS 230

Query: 188  DCIVDLREYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLLEKRVDLLQRAEVHVCAFDIE 247
            D IVD+REYDVPYH+R  ID D+R G+WY V        +         A+  V A+DIE
Sbjct: 231  DFIVDIREYDVPYHVRVMIDLDIRVGKWYFVEAKHGVTKVTVNEGRSLPADPVVMAYDIE 290

Query: 248  TTKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNV 307
            T+KLPLKFPDA  D IMMISYM+DGQG+LI NRE + EDI D +YTPKPE+ G F + N 
Sbjct: 291  TSKLPLKFPDAATDQIMMISYMIDGQGFLITNREIISEDIGDFDYTPKPEYPGPFMIFNE 350

Query: 308  NNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDKNQGE 367
             +E  ++  +F H++E +P +  TYNGD+FDWPF+E RA+ +G  M  E+G++ D ++ +
Sbjct: 351  PDEKSVIERFFLHIKEARPTVIATYNGDFFDWPFVEARASVNGIDMYHEIGWKKD-SEDQ 409

Query: 368  CRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQMMA 427
             +  ++ H+DCF WV RDSYLPQGS+GLKAVT AKLGYDP E++PE M  +A E+PQ +A
Sbjct: 410  YKCSYSVHMDCFHWVNRDSYLPQGSRGLKAVTVAKLGYDPDELDPELMTPYASERPQTLA 469

Query: 428  SYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVIC 487
             YSVSDAVATYYLYM YVHPFIFSL TI+P+  D+VLRKG+GTLCEMLLMVQAY+  ++ 
Sbjct: 470  EYSVSDAVATYYLYMKYVHPFIFSLCTILPLGADDVLRKGTGTLCEMLLMVQAYQQEIVL 529

Query: 488  PNKHQSDPEKFYRNHLLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQLLNNLDRD 547
            PNKH +  E F+  HLL+SETY+GGHVE +E+GVFRSD+P +F +DP A ++LL +LD  
Sbjct: 530  PNKHITPKEAFWDGHLLDSETYVGGHVESIEAGVFRSDIPVNFAVDPGAVDELLRDLDNA 589

Query: 548  LQYAIKVEGKMDLESVSNYDEVKNAIMEKLLRLQEEPIREECPLIYHLDVAAMYPNIILT 607
            L++ I VE K  L+ V+NYDEVK  IM KLL L+E P R E PLIYHLDVA+MYPNI+ T
Sbjct: 590  LKFVITVEEKKSLDDVTNYDEVKQQIMSKLLNLKETPNRNERPLIYHLDVASMYPNIMTT 649

Query: 608  NRLQPPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYYHLKKQIESE-FVD 666
            NRLQP S++++  C ACDFNRPGKTC R+L W WRGE    KR +Y  ++  +E+E F  
Sbjct: 650  NRLQPDSMISESDCAACDFNRPGKTCDRRLPWAWRGEYIPAKRDEYNMIRHALENEKFPG 709

Query: 667  GTNGHLSKSFLDLPKMEQQSRLKDRLKKYCQKAYKRVLDKPVTELREAGICMRENSFYVD 726
             T     ++F  L   EQ S ++ RL+ Y QK Y ++ D   T +REA IC REN FY++
Sbjct: 710  KTPKAPPRTFQQLSADEQASLVRKRLQLYSQKVYHKIHDS-TTIIREAIICQRENPFYIN 768

Query: 727  TVRSFRDRRYEYKGLNKVWKGKLSEAKASGN-SIKIQEAQDMVVLYDSLQLAHKCILNSF 785
            TVR FRDRRY+YKG  KVWKGK    KASG  S +I++A+ M ++YDSLQLAHK ILNSF
Sbjct: 769  TVRDFRDRRYDYKGKAKVWKGKTDALKASGAPSSEIEDAKKMSIVYDSLQLAHKVILNSF 828

Query: 786  YGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLPGSFPEN 845
            YGYVMRKG+RWYSMEMAGV   TGA IIQ AR L+E++G+PLELDTDGIWC+LP +FPEN
Sbjct: 829  YGYVMRKGSRWYSMEMAGVTCLTGATIIQLARQLVERLGRPLELDTDGIWCMLPATFPEN 888

Query: 846  FTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEFEVDGP 905
            F FK K+  KK+ ISYPCVMLN  V    TN QYQTLVDP +  YETHS+ SI FEVDGP
Sbjct: 889  FAFKLKN-GKKMNISYPCVMLNHLVHDKFTNHQYQTLVDPKTFRYETHSDNSIFFEVDGP 947

Query: 906  YKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFLHG 965
            YKAMILP SKEE   +KKRYAVFNDDG+LAELKGFE+KRRGELKLIK+FQ ++F  FL G
Sbjct: 948  YKAMILPTSKEEDKNLKKRYAVFNDDGSLAELKGFEVKRRGELKLIKIFQQQIFKFFLEG 1007

Query: 966  STIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLADYGEQKSCAVTT 1025
              + +CY+AVA VAN+WLD+L N+G  +AD EL++ ISE+ +MSK+L +YG QKS ++TT
Sbjct: 1008 EDLTQCYTAVAKVANQWLDVLHNKGSTLADEELMELISENRSMSKTLEEYGSQKSTSITT 1067

Query: 1026 ARRLSDFLGDTMVKDKGLRCQYIVACEPQGTPVSERAVPVAIFETDAEIMKFYLRKWCKT 1085
            ARRL+DFLG+ MVKDKGL C++I+   P+  PV+ERAVPVAIF  +  + + YL+KW K 
Sbjct: 1068 ARRLADFLGEQMVKDKGLNCKFIICSRPRNAPVTERAVPVAIFSAEETVKRAYLKKWLKE 1127

Query: 1086 S-SDVGIRSIVDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLYKKVREKEDK 1144
              +D   R+++DW YY +RL S IQK+ITIPAA+QKV NPVPRV HPDWL +++  K+DK
Sbjct: 1128 EPADTDPRALLDWDYYLERLGSVIQKLITIPAALQKVRNPVPRVPHPDWLQRRINIKDDK 1187

Query: 1145 FRQRKLVDIFSSLKKDDFLNKTCNAETNLMDENVEDLEDFPKKRRNSVNGPRPIVRCFEV 1204
             +Q+KL D+FSS        +     TN+     ED+EDF  K    +  P+ +      
Sbjct: 1188 MKQKKLTDLFSS-------KEPLADITNINGPRAEDMEDFGSK----LLKPKQL------ 1230

Query: 1205 NNEQKTVKTTDQVDSLRQQLEPSEVSDQQPSSQNAIDTENIDRIVDYKGWLELKKRKWKD 1264
                  +  + QV +   Q   S    ++P+    +     D   DY G+L+ +K+KWK 
Sbjct: 1231 ----GALIASSQVQAPSSQKRKSPEPAEEPNPIATLPDAMPDPSDDYVGFLQYQKKKWKL 1286

Query: 1265 NLDR--RKKQKLGSLRASHQANGVSESLGDMINHKEAQRRTGVGSYFRRQETAMTRCHWQ 1322
                  R++Q  G  R +  +N                    +   F +Q        WQ
Sbjct: 1287 QKQARIRRRQLFGERRGNVSSN--------------------IQQTFMKQAHLTFMNTWQ 1326

Query: 1323 IIQLVPSSQSGVFLAWVVVEGIMVRIPITVPRLFYLNSKDPIVEKFPG--------RRVN 1374
            ++ L  +   G+  A V+++  +  + I VPR  +LN K    E+ P          +VN
Sbjct: 1327 LLHLKATDTPGIVTAHVLIDAKIHTLKINVPRQVFLNLKK---EELPDVEIAGCEVEQVN 1383

Query: 1375 KTLPHGRRSFNLIEVMIDEDQFRKESKKLAALLADPEVE 1413
             TLP+G  S +L ++ + ED +  E++K + L   P VE
Sbjct: 1384 YTLPNGHESKHLFKLTVPEDVYFNEAEKFSLLFNHPSVE 1422



 Score =  236 bits (601), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 159/629 (25%), Positives = 284/629 (45%), Gaps = 71/629 (11%)

Query: 1408 ADPEVEVLGWQQNAAKIGMQRCAASSQWFNERISLARYAHI------------------- 1448
            +D  +  LGWQ   A+  +        W     +LARY  +                   
Sbjct: 1619 SDSSLPPLGWQAVVARRLVGHYLGLGSWILHLTALARYGDVPLCNLERDDPRFLIDIAYA 1678

Query: 1449 ---------LWISDDGVPDLGGTSEEDECFA-DEVHQPVLTYPGAYRKVSVELKIHHLSV 1498
                     LW S D  PD  G  ++D   + D V  P +  PG +  V ++L + +L++
Sbjct: 1679 RRLQANGVVLWWSPDPRPDHAGYEKDDITGSLDTVKMPSINNPGTFSSVCIDLDVRNLAI 1738

Query: 1499 NALLKSNQVNEMEGGGLFGFDQDMNSGPYNNELCGFDETTSSAPAFRVVKQLIQRCLTDA 1558
            N +L S+ +NE+EG     F    N     +E+   +   ++A    V++++++    +A
Sbjct: 1739 NTILTSSLINELEGAESISF----NPTADGSEILASENGFANAGVL-VLREMVKAWWAEA 1793

Query: 1559 VTSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEFRKLGATIIFA 1618
               G+  AD ++QHL RW+ +P S ++D  LH  +  + +K F  L+A+FR++G+ +IFA
Sbjct: 1794 C-KGSTMADVLVQHLVRWVENPDSFMYDRALHYYVQMMSRKAFQQLMADFRRVGSQVIFA 1852

Query: 1619 NFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLFMDQYNYGGIP 1678
            + +++I+ T K ++  A AY   ++K+++++ LF +I+LE   +W  L++ D++NYGG  
Sbjct: 1853 SANRLILQTTKAEVGNAFAYSQYIIKSIKSKSLFHFIDLEIKEYWDYLVWYDEFNYGG-K 1911

Query: 1679 ARADESLDDDSQVDIVSSWNIAEYLPKEIQDHFVLVVSEFMYIPWKHAQKLAASRASLQE 1738
            A    +  D+  ++ +  W +A +LP  +Q  F   V EF+       Q +   +     
Sbjct: 1912 ACQQVADSDEQNLETIMHWQMATFLPLRLQPIFQDWVIEFI-------QLMHKLKRPENN 1964

Query: 1739 GSSCTPSITVAAAEN----FESHIV--QYVKGEISSYFTGKLLSIVRDAIHHMKKMNNDQ 1792
                TP +T     N     ++ I+  +  +        G +    R+ +H     +   
Sbjct: 1965 DPDSTPRLTQLPNRNQDLDGDTQIILGKAFEKPFKKVIVGLINQQKRELLHPELAEDYSF 2024

Query: 1793 HNSPGVMQTAANIHKVDAPLEFIKHVCAAFALDQNVQHDVLVMRKNLLKYVRVREFAPEA 1852
             + PG     +++   +  LE +K +    +LD+N+  +  ++RK LL    +REF+ E 
Sbjct: 2025 PSLPG-----SHLQLRNPILELVKSIMQVLSLDKNITLEARLLRKELLALFEIREFSKEG 2079

Query: 1853 EFRDPCPSFILPNVICSYCNDCRDLDLCRDMALLA---------------QDWHCAMPQC 1897
             F +P  S  L  V C  C   RDLD CRD  L+                Q W C    C
Sbjct: 2080 TFTNPSESLKLLQVSCDSCTMARDLDFCRDEDLIGAPGDNNNNGGGGGGGQSWQCGF--C 2137

Query: 1898 GQPYDREVMENALLQIVRQRERLYHLQDLVCIRCNQVKAAHLAEQCACAGSFRCKEDASD 1957
            G  +DR  +E  LL +V      + +QDL C RC  ++     E C C+G ++      +
Sbjct: 2138 GSEFDRVGLEERLLAMVEGWATEWAVQDLKCERCGALRVNDFMEHCTCSGGWKEVLSREE 2197

Query: 1958 FRSKMQIFLNIANRQGFQLLQECTSWILE 1986
               K+ +   +A   G ++L      + E
Sbjct: 2198 VVRKLGVMRRVARYYGLKMLGNVVEGLYE 2226


>gi|405119264|gb|AFR94037.1| DNA polymerase epsilon catalytic subunit A [Cryptococcus neoformans
            var. grubii H99]
          Length = 2251

 Score = 1333 bits (3451), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 690/1455 (47%), Positives = 937/1455 (64%), Gaps = 117/1455 (8%)

Query: 1    MDRRR-------WDRQDGRRTKKQKLIRSAEEELEAKLGYDLF----SEGDKRLGWLLTF 49
            +DRRR         R+DG    ++       +E++ K+G+  F    +EG++++GWL+  
Sbjct: 44   IDRRRPAAPSNQATREDGTAATERFEEVKVYDEIDEKIGFWRFESVRAEGEEKIGWLVNM 103

Query: 50   ASSSLEDEDTRKVYSCIDLYFVSQDGSTFKSKYKFRPYFYAATKEKMEMDVEAYLRRRYE 109
              + ++ +      + +D YF+  DG +FK    F PYFY + +   E  VE +L +RYE
Sbjct: 104  HQTLMQSDVHPGGLAAVDYYFIQDDGGSFKVSIPFEPYFYLSCRGGTESIVEEWLLKRYE 163

Query: 110  SQIADIEILEKEDLDLKNHLSGLHKSYLKISFDTVQQLMDVKKDLLHVVERNQAKFDAAE 169
              I  IE  +K DL+L NHL      +LK+ F     L  +++DLL +   N  KF A +
Sbjct: 164  GIIIRIEREKKWDLNLPNHLLSAPPVFLKLFFHNTADLQTIRRDLLPLARTNSEKFTAVD 223

Query: 170  AYESILTGK--------------------REQRPQDFLDCIVDLREYDVPYHIRFAIDND 209
            AY  +++ +                    R+++ ++  +CI+++RE+D+ YH+R AID +
Sbjct: 224  AYADVVSAEAAANGHGDDENRAWGAEDDTRKKKDKEPSECIIEVREHDLAYHLRVAIDLN 283

Query: 210  VRCGQWYDVSISSTGPLLEKRVDLLQRAEVHVCAFDIETTKLPLKFPDADYDIIMMISYM 269
            +R G WY V+  +    LE+  D ++RA+  V A+DIETTK PLKFPD   D IMMISYM
Sbjct: 284  IRVGLWYTVTSRTGVITLERIPDRVKRADPVVMAYDIETTKQPLKFPDQQTDQIMMISYM 343

Query: 270  LDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNVNNEIELLRLWFAHMQEVKPGIY 329
            +DG GYLI NRE VGEDI+D EYTP+ E+ G F V N  +E  ++R WF H+++ KP + 
Sbjct: 344  IDGMGYLITNREIVGEDIDDFEYTPRDEYPGEFTVFNEPDEPAVIRRWFEHIRDSKPTVI 403

Query: 330  VTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDKNQGECRAKFACHLDCFAWVKRDSYLP 389
             TYNGD FD+PF++ RA  HG  M EE+GF+ D  + E +++   H+DCF WVKRDSYLP
Sbjct: 404  ATYNGDSFDFPFVDARAKVHGISMYEEIGFKPDIEE-EYKSRSTMHMDCFRWVKRDSYLP 462

Query: 390  QGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQMMASYSVSDAVATYYLYMTYVHPFI 449
            QGSQGLKAVT AKLGY+P+E++PE M  +A E+PQ++A YSVSDAVATYYLYM YVHPFI
Sbjct: 463  QGSQGLKAVTTAKLGYNPIELDPELMTPYAIEQPQILAQYSVSDAVATYYLYMKYVHPFI 522

Query: 450  FSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVICPNKHQSDPEKFYRNHLLESETY 509
            FSL  IIP+SPDEVLRKG+GTLCE LLMV+AY A++I PN+H+      Y  HLL SETY
Sbjct: 523  FSLCNIIPLSPDEVLRKGTGTLCETLLMVEAYDAHIIMPNRHEDPHGVTYEGHLLASETY 582

Query: 510  IGGHVECLESGVFRSDLPTSFKLDPSAYEQLLNNLDRDLQYAIKVEGKMDLESVSNYDEV 569
            +GGHVE LE+GVFRSD+PT FK+ PSA + L+++LD  L++++  EG++ LE V NYDEV
Sbjct: 583  VGGHVEALEAGVFRSDIPTHFKIVPSAIQGLIDDLDAALRFSLIEEGQVKLEDVENYDEV 642

Query: 570  KNAIMEKLLRLQEEPIREECPLIYHLDVAAMYPNIILTNRLQPPSIVTDEVCTACDFNRP 629
            K  I   L  +++EP R + PLIYHLDVAAMYPNI+L+NRLQP S+  +  C  CD+NRP
Sbjct: 643  KQQIQTALETMRDEPNRFDNPLIYHLDVAAMYPNIMLSNRLQPDSVKEEADCAVCDYNRP 702

Query: 630  GKTCLRKLEWVWRGEIFMGKRSDYYHLKKQIESE-FVDGTNGHLSKSFLDLPKMEQQSRL 688
             K C R++EW WRGE F  KR +   ++  +E E F         + F+DL   EQ + L
Sbjct: 703  DKKCDRRMEWAWRGEYFPAKRDEVNMVRYALEQETFPPKRPYDPKRRFVDLSPAEQSALL 762

Query: 689  KDRLKKYCQKAYKRVLDKPVTELREAGICMRENSFYVDTVRSFRDRRYEYKGLNKVWKGK 748
              RL  Y +K YK+  D  +   +   IC RENSFY+DTVR+FRDRRYEYKGL+K WK  
Sbjct: 763  HKRLGDYSRKVYKKTHDTKIV-TKTTIICQRENSFYIDTVRAFRDRRYEYKGLHKTWKKN 821

Query: 749  LSEAKASGNSI-KIQEAQDMVVLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTY 807
            L +A   G ++  + EA+ M+VLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAG+   
Sbjct: 822  LDKAFEEGGAVAAVDEAKKMIVLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGITCL 881

Query: 808  TGAKIIQNARLLIEKIGKPLELDTDGIWCVLPGSFPENFTFKTKDLKKKLTISYPCVMLN 867
            TGA IIQ AR L+E+IG+PLELDTDGIWC+LPG FPE+F+FK K+  KK  ISYPC MLN
Sbjct: 882  TGATIIQMARQLVEQIGRPLELDTDGIWCMLPGVFPEDFSFKLKN-GKKFGISYPCTMLN 940

Query: 868  VDVARNNTNDQYQTLVDPVSKTYETHSECSIEFEVDGPYKAMILPASKEEGILIKKRYAV 927
              V    TNDQY  LVD  S TY    E SI FE+DGPYKAMILP+SKEE  L+KKRYAV
Sbjct: 941  HLVHAQFTNDQYHELVDNDSGTYNVKKENSIFFELDGPYKAMILPSSKEEDKLLKKRYAV 1000

Query: 928  FNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFLHGSTIEECYSAVAAVANRWLDLLD 987
            FN DG+LAELKGFE+KRRGEL++IK+FQ+++FDKFL G T EECY+AVA VA++WLD+L 
Sbjct: 1001 FNPDGSLAELKGFEVKRRGELQMIKIFQSQIFDKFLLGKTTEECYAAVATVADQWLDILQ 1060

Query: 988  NQGKDIADSELIDYISESSTMSKSLADYGEQKSCAVTTARRLSDFLGDTMVKDKGLRCQY 1047
            ++   + D EL+D I+E+ +MSK+LA+Y  QKS +++TARRL++FLG+ MVKDKGL C++
Sbjct: 1061 SKASSLHDDELVDLIAENRSMSKTLAEYAGQKSTSISTARRLAEFLGEQMVKDKGLSCRF 1120

Query: 1048 IVACEPQGTPVSERAVPVAIFETDAEIMKFYLRKWCKTSS--DVGIRSIVDWSYYKQRLS 1105
            I++ +P G PV+ERAVPVAIF  +  + + YLRKW K +S  D  +R+I+DW YY +RL 
Sbjct: 1121 IISAKPNGAPVTERAVPVAIFTAEEPVKRHYLRKWLKDNSLTDFDLRTILDWEYYTERLG 1180

Query: 1106 SAIQKIITIPAAMQKVSNPVPRVVHPDWLYKKVREKEDKFRQRKLVDIFSSLKKDDFLNK 1165
            S IQK+ITIPAA+QKV NPVPR+ HPDWLYK++  KEDKF+Q K+ D+F+ LK       
Sbjct: 1181 SVIQKLITIPAALQKVPNPVPRIRHPDWLYKRIATKEDKFQQHKINDMFTKLK------- 1233

Query: 1166 TCNAETNLMDENVEDLEDFPKKRRNSVNGPRPIVRCFEVNNEQKTVKTTDQVDSLRQQLE 1225
                       ++EDL D  KK      GP+  V    V  + +  +          +  
Sbjct: 1234 -----------DMEDLGDRQKKV-----GPKLAV----VRRKNRKEQEK----ESEIEEI 1269

Query: 1226 PSEVSDQQPSSQNAIDTENIDRIVDYKGWLELKKRKWKDNLDRRKKQKLGSLRASHQANG 1285
            P    D                  DY G++ + K+KW     R+++Q+    R       
Sbjct: 1270 PPNPED------------------DYAGYIRVMKKKW-----RKQRQEKARAR------- 1299

Query: 1286 VSESLGDMINHKEAQRRTG-VGSYFRRQETAMTRCHWQIIQLVPSSQSGVFLAWVVVEGI 1344
                       K   R+ G + S  R Q + M    W +IQ+  +++ G F  W+ ++G 
Sbjct: 1300 -----------KSGLRQDGTISSMLRTQTSGMNSKQWDVIQIASTNRPGEFKLWLAIDGT 1348

Query: 1345 MVRIPITVPRLFYLNSK-DP-----IVEKFPGRRVNKTLPHGRRSFNLIEVMIDEDQFRK 1398
               + + VPR FYLN K DP      ++++    V +TLP G+ + +L ++ +DE  F +
Sbjct: 1349 FQSVRLRVPREFYLNFKEDPDPQMLAIDRYEAVEVVRTLPRGQPARHLYKLSVDEVLFME 1408

Query: 1399 ESKKLAALLADPEVE 1413
                 + L+ +P V+
Sbjct: 1409 GESHFSTLINNPNVD 1423



 Score =  258 bits (660), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 163/569 (28%), Positives = 279/569 (49%), Gaps = 59/569 (10%)

Query: 1448 ILWISDDGVPDLGGTSEEDECFADEVHQPVLTYPGAYRKVSVELKIHHLSVNALLKSNQV 1507
            ++W S    PDLGG SEED    +++  P ++  G Y    +E+++  L++NA+L+S  V
Sbjct: 1678 LIWWSSTPRPDLGG-SEEDANSGEDLVSPHISNRGCYSSTVLEMEVSDLAINAVLQSALV 1736

Query: 1508 NEMEGGGL--FGFDQ------DMNSGPYNNELCGFDETTSSAPAFRVVKQLIQRCLTD-- 1557
            NEMEG G     FD       +   G  N  +   D   S+   F V+K +++    D  
Sbjct: 1737 NEMEGSGTGSLAFDSASHNLDEYAKGTVNTSVILGDAVLSTQ-TFGVLKSMLRAWYADKA 1795

Query: 1558 -AVTSGNVF--ADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEFRKLGAT 1614
             A   G+    A+ ++   +RW+ S  S + +P LHR LH +M+K F  LLAEF++LGA 
Sbjct: 1796 RAHVKGDSVSPAEIVVDQFWRWISSSTSSMFEPALHRFLHGLMRKTFLQLLAEFKRLGAQ 1855

Query: 1615 IIFANFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLFMDQYNY 1674
            +++A+F +V + T K D  +A A+   L+ A  ++ELF  + ++   FW+ L +MD  N+
Sbjct: 1856 VVYADFGRVFLLTSKPDAGSAFAFAKYLVAAANSQELFRHLIIDVAQFWNYLAWMDVANF 1915

Query: 1675 GGI---PARADESLDDDSQVDIVSSWNIAEYLPKEIQDHFVLVVSEFMYIPWKHAQKLAA 1731
            GG+   P  A        + +I   WNI  +LP  +Q  F   V+ F++  +   +  + 
Sbjct: 1916 GGVKVSPETAASREPPAKRFEISMDWNIQSFLPGTLQPVFERNVASFIFSLYSAKRSSSD 1975

Query: 1732 SRASL---------QEGSSCTPSITVAAAENFESHIVQYVKGEISSYFTGKLLSIVRDAI 1782
             R  L         Q G+  T ++     +  ++         IS   T +LLS     I
Sbjct: 1976 GREPLKVIHSLNIDQPGTEATSTVNPTKEKEKKAASKS-----ISQTLTRRLLS----DI 2026

Query: 1783 HHMKKMNNDQHNSPGVMQT-------AANIHKVDAPLEFIKHVCAAFALDQNVQHDVLVM 1835
              +K+        P    T        A   + +  LE IK +   ++L      +V ++
Sbjct: 2027 AAVKRQQAAVQLEPEEAYTLAFPDLPGARSKRTNPTLELIKAITEVYSLASEHSIEVQIL 2086

Query: 1836 RKNLLKYVRVREFAPEAEFRDPCPSFILPNVICSYCNDCRDLDLCRD------------- 1882
            ++NLL  + V+EF+ +A F  PC S  +P VIC  CN  RD+DLCRD             
Sbjct: 2087 KRNLLDLIGVKEFSSDAAFNPPCDSIEVPMVICKKCNAIRDVDLCRDPDRLPSVDPDSGE 2146

Query: 1883 -MALLAQDWHCAMPQCGQPYDREVMENALLQIVRQRERLYHLQDLVCIRCNQVKAAHLAE 1941
             +  + + W C   +C   YDR  +E  L++++ +    Y +QD++C++C+Q K+ +LA 
Sbjct: 2147 MLEPVRKSWACH--KCDSEYDRFQIEQPLIEVITKTITNYQIQDVICLKCSQTKSDNLAA 2204

Query: 1942 QCACAGSFRCKEDASDFRSKMQIFLNIAN 1970
             C C G FR   + ++ ++K+++  ++ +
Sbjct: 2205 TCKCGGGFRTTSNRNELKTKLKMIKSVCD 2233


>gi|428168174|gb|EKX37122.1| DNA polymerase epsilon catalytic subunit [Guillardia theta CCMP2712]
          Length = 2158

 Score = 1332 bits (3448), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 687/1404 (48%), Positives = 922/1404 (65%), Gaps = 90/1404 (6%)

Query: 46   LLTFASSSLEDEDTRKVYSCIDLYFVSQDGSTFKSKYKFRPYFYAATKEKMEMDVEAYLR 105
            ++T+A  ++ D +T    S +D YF+ QDGS FK  +K+ PYFY AT+   E ++E+ LR
Sbjct: 1    MVTYAPVTISDSETGAEVSGVDYYFIQQDGSKFKVLFKYNPYFYIATEPGFEREIESVLR 60

Query: 106  RRYESQIADIEILEKEDLDLKNHLSGLHKSYLKISFDTVQQLMDVKKDLLHVVERN---- 161
            R+Y   +AD+   +  DLD+ NHL+GL ++ L++ F  V+ L++V+K+L  +V+RN    
Sbjct: 61   RKYAEVLADVVHKQMWDLDMPNHLAGLKRNMLQLKFRNVKDLVEVRKELSSMVQRNVERK 120

Query: 162  QAKFDAAEAYESILTGKREQRPQDFLDCIVDLREYDVPYHIRFAIDNDVRCGQWYDVSIS 221
            + K + + +++        +  +  LD I+D+REYDVPY +R AID++   G WY+V I 
Sbjct: 121  KEKENGSVSFDGQTNHLSNRLQESVLDMIIDMREYDVPYVMRVAIDHEFFVGLWYEVQIQ 180

Query: 222  STGPLLEKRVDLLQ---RAEVHVCAFDIETTKLPLKFPDADYDIIMMISYMLDGQGYLII 278
                 +  R +L +   RAE  V AFDIE TK PLKFPD++ D I MISYM+DG+G+LI+
Sbjct: 181  EGVVDIMPRPNLTEKWGRAEPRVLAFDIEVTKEPLKFPDSEIDTIYMISYMIDGEGFLIV 240

Query: 279  NRECVGEDIEDLEYTPKPEFEGYFKVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFD 338
            NRE V EDI+D +YTPK E+EG F   NV NE+ LL+ +  H++EVKP I+VTYNGD+FD
Sbjct: 241  NREIVTEDIDDFDYTPKKEYEGPFTCFNVPNELALLKRFIDHIKEVKPLIFVTYNGDFFD 300

Query: 339  WPFLETRAAHHGFKMSEELGFQCDKNQGECRAKFACHLDCFAWVKRDSYLPQGSQGLKAV 398
            +PF++ R   +G  M  E+G Q  +++ E  ++FACHLD F WV RDSYLPQGS+GLKAV
Sbjct: 301  FPFVDARMKKYGLNMEAEIGLQKQQSE-EYSSRFACHLDAFHWVNRDSYLPQGSRGLKAV 359

Query: 399  TKAKLGYDPLEVNPEDMVRFAKEKPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPM 458
            TK KLGYDP E++PEDM+ FA+E+PQ MASYSVSDAVATYYLYM YVHPFIFSL  IIPM
Sbjct: 360  TKHKLGYDPKEIDPEDMLPFARERPQEMASYSVSDAVATYYLYMQYVHPFIFSLCNIIPM 419

Query: 459  SPDEVLRKGSGTLCEMLLMVQAYKANVICPNKHQSDPEKFYRNHLLESETYIGGHVECLE 518
            +P +VLRKGSGTLCE LL V+AY+ N++CPNKH+ DP K Y+ HL+ESETYIGGHVE L 
Sbjct: 420  TPGDVLRKGSGTLCETLLQVEAYRGNIVCPNKHKDDPMKMYKGHLIESETYIGGHVEALN 479

Query: 519  SGVFRSDLPTSFKLDPSAYEQLLNNLDRDLQYAIKVEGKMDLESVSNYDEVKNAIMEKLL 578
            S                  ++L+ N+DRDL +AI VEG    E + +YD  K  I++ L 
Sbjct: 480  S------------------DELIANMDRDLHFAITVEGGKKFEDIEDYDAQKEKIVKMLE 521

Query: 579  RLQEEPIREECPLIYHLDVAAMYPNIILTNRLQPPSIVTDEVCTACDFNRPGKTCLRKLE 638
             L+E P REE P IYHLDVAAMYPNIILTNRLQPP++VT + C +CDF  P   C R+++
Sbjct: 522  ALRETPRREENPSIYHLDVAAMYPNIILTNRLQPPAMVTPQTCASCDFYHPEMNCRREMQ 581

Query: 639  WVWRGEIFMGKRSDYYHLKKQIESEFVDGTNGHLSKSFLDLPKMEQQSRLKDRLKKYCQK 698
            W WRGEIF   +++ + +  Q++         H S+ F ++   E + R+KD    YC K
Sbjct: 582  WQWRGEIFPATKNEIHQVTGQLK---------HDSEDF-EVSSTEVRKRVKD----YCSK 627

Query: 699  AYKRVLDKPVTELREAGICMRENSFYVDTVRSFRDRRYEYKGLNKVWKGKLSEAKASGNS 758
             YKR  D  +TE+R A IC RENSFY+DTVR+FRDRRY YKGL K W GKL EA+ SG+ 
Sbjct: 628  VYKRTHDT-LTEVRTAYICQRENSFYIDTVRAFRDRRYTYKGLTKSWGGKLKEAEKSGDP 686

Query: 759  IKIQEAQDMVVLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARL 818
               +E +  VVLYDSLQLAHKCILNSFYGYVMR+GARWYSMEMAGVVT+ G  II+ AR 
Sbjct: 687  AATKECKGFVVLYDSLQLAHKCILNSFYGYVMRRGARWYSMEMAGVVTHKGGNIIRVARQ 746

Query: 819  LIEKIGKPLELDTDGIWCVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQ 878
            L+E+IG PLELDTDGIWC LP SFP+   FK K  KK L +SYPC MLN     +  N Q
Sbjct: 747  LVERIGIPLELDTDGIWCCLPQSFPDGIEFKVKGEKKPLVVSYPCSMLNAQTHHDCVNHQ 806

Query: 879  YQTLVDPVSKTYETHSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELK 938
            Y TLVD   + Y  HSECSI FE+DGPYKAMILPA+KEEG  +KKRYAVFN DG+LAELK
Sbjct: 807  YHTLVDEEKQKYSVHSECSILFELDGPYKAMILPAAKEEGKKLKKRYAVFNFDGSLAELK 866

Query: 939  GFEIKRRGELKLIKVFQAELFDKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSEL 998
            GFE+KRRGEL+L+KVFQ+E+F +FL G+ + ECY++VAAVAN+WLD+LDN+G D+ D EL
Sbjct: 867  GFELKRRGELQLVKVFQSEVFKRFLDGTDLIECYNSVAAVANQWLDVLDNKGIDLEDEEL 926

Query: 999  IDYISESSTMSKSLADYGEQKSCAVTTARRLSDFLGDTMVKDKGLRCQYIVACEPQGTPV 1058
            ID ISES  MSKS+  YGE+KS A+TTA R+++FLG  M+KDKGL C+Y+V+  P+G+PV
Sbjct: 927  IDLISESCNMSKSMEAYGERKSMAITTANRIAEFLGGDMIKDKGLACKYVVSRNPEGSPV 986

Query: 1059 SERAVPVAIFETDAEIMKFYLRKWCKTS----SDVGIRSIVDWSYYKQRLSSAIQKIITI 1114
            +ERA+PV IF+ +  I   +L+KWC TS    S + +RSI+DW YYK RL+S+IQKI+TI
Sbjct: 987  TERAIPVEIFKAEPRIQNAFLKKWCNTSTLVDSSIDVRSILDWQYYKDRLASSIQKIVTI 1046

Query: 1115 PAAMQKVSNPVPRVVHPDWLYKKVREKEDKFRQRKLVDIFSSLKKDDFLNKTCNAETNLM 1174
            PAAMQ V NPV RV HPDWL + VRE+ D+F+Q+K+   F   +     +K    +++ M
Sbjct: 1047 PAAMQNVENPVGRVPHPDWLLRIVRERNDRFKQQKIGSFFKVDESGS--SKVSTEQSSAM 1104

Query: 1175 DE-NVEDLEDFPKKRRNSVNGPRPIVRCFEVNNEQKTVKTTDQVDSLRQQLEPSEVSDQQ 1233
            +   V D+E   +K     NG  P V    V ++    K      S+  ++   E   +Q
Sbjct: 1105 EHPTVMDIEGTVQKS----NGAFPTV----VRHKGTGKKGKKCQQSMEAEIFSEESVKRQ 1156

Query: 1234 PSSQNAIDTENIDRIVDYKGWLELKKRKWKDNLDRRKKQKLGSLRASHQANGVSESLGDM 1293
                  I TE I    D++ W    +  W   + +RK+++L             E  G  
Sbjct: 1157 EELLTKIKTEKITMESDFETWHSYMRTLWHMQVLQRKRKRL------------EEGEGYN 1204

Query: 1294 INHKEAQR---RTGVGSYFRRQETAMTRCHWQIIQLVPSSQSGVFLAWVVVE-GIMVRIP 1349
             +HK  ++     G+  +F+     M   +W I+++  +   G++  W ++E G M +I 
Sbjct: 1205 RDHKLPRKFVPAGGMTGFFKNLHHTMLSRYWDILKISETKTPGIYDVWAILEDGSMQKIE 1264

Query: 1350 ITVPRLFYLNSK--DPIVEKFPGRRVNKTLPHGRRSFNLIE----------------VMI 1391
            + VPR+FY+N +       K     V++ LP G++ +NL E                V +
Sbjct: 1265 MEVPRIFYVNQRFSPETSSKSTKNIVSRKLPFGKKCYNLEEVQSHVEFRTYSDHHDQVTM 1324

Query: 1392 DEDQFRKESKKLAALLADPEVEVL 1415
             E  +++ SK +A    DP VE L
Sbjct: 1325 SEYDYQEHSKTIATEHEDPTVEGL 1348



 Score =  261 bits (667), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 177/645 (27%), Positives = 299/645 (46%), Gaps = 86/645 (13%)

Query: 1402 KLAALLADPEVEVLGWQQNAAKIGMQRCAASSQWFNERISLARYAHI------------- 1448
            ++ A   D E E LGW+  A K  ++      ++F   +  ARY+HI             
Sbjct: 1539 EVPAYSTDNEYEPLGWETKAGKAFIKNLIEVDRFFEYVLKFARYSHIPICNISSNHADMA 1598

Query: 1449 ------------------LWISDDGVPDLGGTSEEDECFADEVHQPVLTYPGAYRKVSVE 1490
                              LW S    PD+G +        DE+  P   +PG++R+  V 
Sbjct: 1599 TTVSDILFGRLLKNNNYILWASPGCRPDVGSSEMLYAFECDELKNPDANFPGSFRQYCVT 1658

Query: 1491 LKIHHLSVNALLKSNQVNEMEGGGLFGFDQDMNSGPYNNEL------------CGF-DET 1537
            + + HL +  +    ++  ++   L  +  + +S  +N  L            C   DET
Sbjct: 1659 MDLEHLPLTGI----KLIPLKASLLTFYLSNSHSDDFNETLSMQMATGNIPLACTLVDET 1714

Query: 1538 TSSAPAFRVVKQLIQRCLTDAVTSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVM 1597
            T     F+ +  + +  + D + + N  AD +  HLY W+ S  S  + P + R +H++M
Sbjct: 1715 TFCLEPFKFIAYMAESWVNDTMKNSNPHADVLQMHLYNWINSSSSLFYAPAMVRFVHRLM 1774

Query: 1598 QKVFAMLLAEFRKLGATII---FANFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEW 1654
            +K + +LLA  R LGA +I   F +F ++I++  K     A+ YC  L+  +     F++
Sbjct: 1775 RKTYQLLLARIRSLGAEVIQALFLSFHQLILNLKKTQFEQAQEYCKFLVSEINEVTCFQF 1834

Query: 1655 IELEPVHFWHSLLFMDQYNYGGIPARADESLDDDSQVDIVSSWNIAEYLPKEIQDHFVLV 1714
            I ++P  FW  L++MD+YN+ G+ A             I SSW IA++LP+  Q  F  +
Sbjct: 1835 IRMDPQIFWARLVYMDRYNFAGLQAMQ----------SIRSSWEIADHLPRRHQKLFHDM 1884

Query: 1715 VSEFMYIPWKHAQKLAASRASLQEGSSCTPSITVAAAENFESHIVQYVKGEISSYFTGKL 1774
            V E++ +P K+  +L+    S  +G   TP  +   ++ F     +   GE  ++     
Sbjct: 1885 VHEYLCLPMKY--RLSNFEKSSSDGE--TPQTSQIFSQGFTQK--RRALGETINH----- 1933

Query: 1775 LSIVRDAIHHMKKMNNDQHNSPGVMQTAANIHKVDAPLEFIKHVCAAFALDQNVQHDVLV 1834
              I +     M K  N     P   +   ++      LE +KH+C  F+LD ++  +V  
Sbjct: 1934 -EIRKRLFEEMSKEINGMGEYP--YRPGTHLEFGSPQLELLKHLCHVFSLDSDISSEVAS 1990

Query: 1835 MRKNLLKYVRVREFAPEAEFRDPCPSFILPNVICS--YCNDCRDLDLCRDMALLAQ---- 1888
            M++ LLK ++VREF+ EA+F++P  S ILP++ CS   C+  RD+DLCR+   +A     
Sbjct: 1991 MKRGLLKLLQVREFSVEAQFKNPARSVILPDLFCSSVLCSASRDVDLCREQDFIAAVVNA 2050

Query: 1889 -----DWHCAMPQCGQPYDREVMENALLQIVRQRERLYHLQDLVCIRCNQVKAAHLAEQC 1943
                 D      QC  PYDR  +E  L+Q V Q    Y  QDL C +C++  +  +++ C
Sbjct: 2051 QAGQGDGEFRCHQCDLPYDRTAIEFRLVQTVSQLTTSYAQQDLRCNKCHRAASLMMSDYC 2110

Query: 1944 ACAGSFRCKEDASDFRSKMQIFLNIANRQGFQLLQECTSWILEVQ 1988
             C+G F      S    +++  L +A   GF+ L++  S  LEV+
Sbjct: 2111 QCSGKFEHALKPSAVTERLEALLGVAKFYGFKWLEQEISNHLEVE 2155


>gi|336378748|gb|EGO19905.1| hypothetical protein SERLADRAFT_363759 [Serpula lacrymans var.
            lacrymans S7.9]
          Length = 2223

 Score = 1332 bits (3447), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 691/1428 (48%), Positives = 915/1428 (64%), Gaps = 118/1428 (8%)

Query: 25   EELEAKLGYDLFSEGDKRLGWLLTFASSSLEDEDTRKVYSCIDLYFVSQDGSTFKSKYKF 84
            +E++ KLG+    EG KR GWL+    + ++D D     + +D YF+  DG  FK   ++
Sbjct: 73   DEVDEKLGFARIQEGGKRDGWLINMHPTLIKDADYPSGKAAVDFYFIQDDGGMFKCTLQY 132

Query: 85   RPYFYAATKEKMEMDVEAYLRRRYESQIADIEILEKEDLDLKNHLSGLHKSYLKISFDTV 144
             PYFY A K   E  VE +L +RYE  I  I    KEDL L NHL G  + YL++ F  V
Sbjct: 133  EPYFYIACKSGAETMVEEWLMKRYEGIICRITRDRKEDLKLPNHLMGHRRLYLQLCFRNV 192

Query: 145  QQLMDVKKDLLHVVERNQAKFDAAEAYESILTGKREQ----------------------- 181
              L+ V++D+  +   N AK DA +AY  +++                            
Sbjct: 193  SDLLTVRRDIAPLALANGAKRDAVDAYAEVVSATASANINIELEGEWAEFGGSSTTGSSF 252

Query: 182  RPQDFLDCIVDLREYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLLEKRVDLLQRAEVHV 241
            R +D  +CI+D+REYDVPY++R AIDN++R G WY V+ ++  P   + V+ ++RA+  V
Sbjct: 253  RERDPGECIIDIREYDVPYYLRVAIDNELRVGLWYAVTFTAGQPSFTQIVERVKRADPVV 312

Query: 242  CAFDIETTKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGY 301
             A+DIETTK PLKFPD   D +MMISYM+DGQGYLI NRE V EDIED EYTPK  +EG 
Sbjct: 313  MAYDIETTKAPLKFPDQAIDQVMMISYMVDGQGYLITNREIVSEDIEDFEYTPKEGYEGP 372

Query: 302  FKVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQC 361
            F V N  +E   +  +F H+QEVKP +  T+NGD+FD+PFL  RA  +G  M  E GF  
Sbjct: 373  FIVFNEPDEAATMMRFFQHIQEVKPTVMATFNGDFFDFPFLCARAKANGIDMFLETGFAI 432

Query: 362  DKNQGECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKE 421
            D ++ E + +   H+DCF WVKRDSYLPQGSQGLKAVT AKLGY+P+E++PE M  +A E
Sbjct: 433  D-SEDEFKCRTCVHMDCFRWVKRDSYLPQGSQGLKAVTTAKLGYNPIELDPELMTPYAME 491

Query: 422  KPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAY 481
            +PQ++A YSVSDAVATYYLYM YVHPFIFSL  IIP+ PDEVLRKGSGTLCE LLMV+AY
Sbjct: 492  QPQVLAQYSVSDAVATYYLYMKYVHPFIFSLCNIIPLCPDEVLRKGSGTLCETLLMVEAY 551

Query: 482  KANVICPNKHQSDPEKFYRNHLLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQLL 541
            +  +I PN+H+      ++ HLL SETY+GGHVE LE+GVFRSD+P+ FK+ PSA +QL+
Sbjct: 552  RGRIIMPNRHEDAHGNMHQGHLLASETYVGGHVEALEAGVFRSDIPSDFKVVPSAVQQLI 611

Query: 542  NNLDRDLQYAIKVEGKMDLESVSNYDEVKNAIMEKLLRLQEEPIREECPLIYHLDVAAMY 601
            ++LD  L + I  E K  LE+V+NYDEVKN I   L  +++ P R + PLIYHLDVAAMY
Sbjct: 612  DDLDAALMFCIVEESKSSLENVTNYDEVKNEIQAALEVMRDNPKRTDKPLIYHLDVAAMY 671

Query: 602  PNIILTNRLQPPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYYHLKKQIE 661
            PNI+L+NRLQP S+V + VC  CD+NRPGKTC R+LEW WRGE F   R ++  ++  + 
Sbjct: 672  PNIMLSNRLQPDSMVDESVCAVCDYNRPGKTCDRRLEWAWRGEFFPAHRDEFNMIRHALN 731

Query: 662  SE-FVDGTNGHLSKSFLDLPKMEQQSRLKDRLKKYCQKAYKRVLDKPVTELREAGICMRE 720
             E F     G   + F DL + EQ + L  RL  Y +K YK++ D  + E RE+ +C RE
Sbjct: 732  QESFPSKRPGGPQRKFADLTETEQTALLHKRLGDYSRKVYKKIKDTKI-ETRESIVCQRE 790

Query: 721  NSFYVDTVRSFRDRRYEYKGLNKVWKGKLSEAKASGNSI-KIQEAQDMVVLYDSLQLAHK 779
            N FYVDTVR FRDRRYEYKGL+K WK  L      G SI ++ EA+ M+VLYDSLQLAHK
Sbjct: 791  NPFYVDTVRRFRDRRYEYKGLHKTWKKNLDTVVGEGRSIAEVDEAKKMIVLYDSLQLAHK 850

Query: 780  CILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLP 839
            CILNSFYGYVMRKGARW+SMEMAG+   TGA IIQ AR L+E+IG+PLELDTDGIWC+LP
Sbjct: 851  CILNSFYGYVMRKGARWHSMEMAGITCLTGATIIQMARALVEQIGRPLELDTDGIWCMLP 910

Query: 840  GSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIE 899
            G FPENF FK  +  K +  SYPC MLN  V    TN QY  L DP +  Y  HSE SI 
Sbjct: 911  GVFPENFKFKLNN-GKSIAFSYPCTMLNHLVHAQFTNHQYHDL-DPETGEYVVHSENSIF 968

Query: 900  FEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELF 959
            FE+DGPY+AMILP+SKEE  L+KKRYAVFNDDG+LAELKGFE+KRRGEL+LIK+FQ+++F
Sbjct: 969  FELDGPYRAMILPSSKEEDKLLKKRYAVFNDDGSLAELKGFEVKRRGELQLIKIFQSQIF 1028

Query: 960  DKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLADYGEQK 1019
            +KFL GST EECY+AVA VA++WLD+L ++ + + D EL+D I+E+ +MSK+LA+YG QK
Sbjct: 1029 EKFLLGSTTEECYAAVAEVADQWLDILFSKAETLGDDELVDLIAENRSMSKTLAEYGGQK 1088

Query: 1020 SCAVTTARRLSDFLGDTMVKDKGLRCQYIVACEPQGTPVSERAVPVAIFETDAEIMKFYL 1079
            S +++TA+RL++FLGD MVKDKGL C++I++  P G PV+ERA+P+AIF  +  + + YL
Sbjct: 1089 STSISTAKRLAEFLGDQMVKDKGLACKFIISARPMGAPVTERAIPIAIFSAEESVKRTYL 1148

Query: 1080 RKWCKTSS--DVGIRSIVDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLYKK 1137
            RKW K +S  +  +RSI+DW YY +RL S IQK+ITIPAAMQKV+NPVPRV HPDWL+++
Sbjct: 1149 RKWLKDNSLTNFDLRSILDWDYYIERLGSVIQKLITIPAAMQKVTNPVPRVRHPDWLHRR 1208

Query: 1138 VREKEDKFRQRKLVDIFSSLKKDDFLNKTCNAETNLMDENVEDLEDFPKKRRNSVNGPRP 1197
            V    DKF+Q K+ D FS                                 RN  + PR 
Sbjct: 1209 VAGAIDKFKQNKVTDFFS---------------------------------RNEFDRPR- 1234

Query: 1198 IVRCFEVNNEQKTVKTTDQVDSLRQQLEPSEVSDQQPSSQNAIDTENIDRIVDYKGWLEL 1257
                  V N ++T + +  +D        + + D +               + Y  WL  
Sbjct: 1235 ----IAVVNRKRTRRDSTPLDEDEDADIDAPLPDPR---------------ISYFSWLRA 1275

Query: 1258 KKRKWKDNLDRRKKQKLGSLRASHQANGVSESLGDMINHKEAQRRTGVGSYFRRQETAMT 1317
             K +WK    +R++ + G   A+     V  S+      K A+ RT              
Sbjct: 1276 MKPRWK----KRREARWGDSTAA-----VVPSM-----FKGARIRTN------------- 1308

Query: 1318 RCHWQIIQLVPSSQSGVFLAWVVVEGIMVRIPITVPRLFYLN----SKDPIVEK--FPGR 1371
               W I+Q+ PS   G F  W+ ++G +  + + +PR+FYL+     KD + +   +   
Sbjct: 1309 -HRWDIVQIRPSKIQGRFTLWLSIDGELTPVALRIPRVFYLHLKSLPKDDLFQTGHYSCD 1367

Query: 1372 RVNKTLPHGRRSFNLIEVMIDEDQFRKESKKLAALLADPEVEVLGWQQ 1419
            +V + LP G     L +V + ED +++  +    L+ DP V+ +  QQ
Sbjct: 1368 KVIRNLPRGLHCSYLYKVTVREDVYQEIQEHFTDLINDPNVDGVFEQQ 1415



 Score =  286 bits (733), Expect = 7e-74,   Method: Compositional matrix adjust.
 Identities = 192/631 (30%), Positives = 310/631 (49%), Gaps = 72/631 (11%)

Query: 1412 VEVLGWQQNAAKIGMQRCAASSQWFNERISLARY-----AHI------------------ 1448
            ++V  WQ + A+  + R  +   W +  + LA Y      HI                  
Sbjct: 1607 LDVFPWQTHVAQKLLYRYLSVGGWLDRLVVLADYYDVPIGHIEGDQPLLLSDITFARRLI 1666

Query: 1449 -----LWISDDGVPDLGGTSEEDECFADEVHQPVLTYPGAYRKVSVELKIHHLSVNALLK 1503
                 LW S    PDLGG  E+D    +E+       PG Y  V +++ + +L+VN++L 
Sbjct: 1667 QQDTVLWWSPSERPDLGGL-EDDFRPVEELQNTEFMSPGCYSNVCLDVAVRNLAVNSVLH 1725

Query: 1504 SNQVNEMEG-GGLFGFDQ------DMNSGPYNNELCGFDETTSSAPAFRVVKQLIQRCLT 1556
            S  VNE+EG GG   FD       + ++G    ++    E++ S   F +++ +++  L 
Sbjct: 1726 SVVVNELEGSGGTTAFDSVSRTLDEYSTGDAQRDIT-LGESSLSPQTFGILRTMVKGWLL 1784

Query: 1557 DAVTSGNVFADAIL--QHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEFRKLGAT 1614
            D +  GN  + A L   H +RW+ +  S +HDP +HR +H +M+K F  +LAEF++LGA 
Sbjct: 1785 DRI-QGNFDSPATLAIDHFWRWVSTSASNMHDPSIHRFVHGLMRKTFIQMLAEFKRLGAH 1843

Query: 1615 IIFANFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLFMDQYNY 1674
            +++A+FS +++ T K     A AY   +  A+ + ELF+ I L+   F+  LLFMD  N 
Sbjct: 1844 VVYADFSHILLATSK-PPGTAHAYATYVATAVTSHELFQHIYLKAERFYDFLLFMDPANM 1902

Query: 1675 GGIPARADESLDDDSQVDIVSSWNIAEYLPKEIQDHFVLVVSEFMYIPWKHAQKL-AASR 1733
            GG+      ++D   ++ I   WNI  +LP  IQD F  V+  F+   ++  QK   ASR
Sbjct: 1903 GGVVCEDPLAVDPPEELSIEMRWNIQTFLPPAIQDDFGKVLQYFIVELFQIRQKTNEASR 1962

Query: 1734 ASLQEGSSCTPSITVAAAENFESHIVQYVKGEISSYFTGKLLSIV-------RDAIHHMK 1786
              L+   +  P  T   A       +   +  I+   T +LL +V       RDA+    
Sbjct: 1963 VPLRVLKNSAPDTTQRDAGKVNE--MDATREFIARRLTRRLLKVVGSIQAKLRDAV---- 2016

Query: 1787 KMNNDQHNS------PGVMQTAANIHKVDAPLEFIKHVCAAFALDQNVQHDVLVMRKNLL 1840
              + D H        PG     +++H ++  LEFIK  CA   L Q  + +V ++++NLL
Sbjct: 2017 -TDEDLHEKFEFPLLPG-----SHLHLINPILEFIKFTCAVLGLAQEYRIEVGLLKRNLL 2070

Query: 1841 KYVRVREFAPEAEFRDPCPSFILPNVICSYCNDCRDLDLCRDMALLAQDWHCAMPQ---- 1896
                VREFA EA FR+PC    L NV C +C+  R+ D CRD  L+        P+    
Sbjct: 2071 DLAGVREFATEAIFRNPCEPLRLANVPCRHCDTLREFDFCRDPELMPNGLDITPPRWLCG 2130

Query: 1897 -CGQPYDREVMENALLQIVRQRERLYHLQDLVCIRCNQVKAAHLAEQCACAGSFRCKEDA 1955
             CG  YDR  +E  L+++V   ER +  QDL C +C QV++ +++  C C+G+++   + 
Sbjct: 2131 GCGVEYDRIAIELELMRMVCSLERSFAQQDLRCAKCKQVRSDNVSRYCQCSGAYQLTMNK 2190

Query: 1956 SDFRSKMQIFLNIANRQGFQLLQECTSWILE 1986
            ++ R +++  +N+A   G   L E     LE
Sbjct: 2191 AEVRRRLRTVVNVAIVHGMAKLAEIAQATLE 2221


>gi|409077248|gb|EKM77615.1| hypothetical protein AGABI1DRAFT_61718 [Agaricus bisporus var.
            burnettii JB137-S8]
          Length = 2236

 Score = 1330 bits (3442), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 687/1424 (48%), Positives = 924/1424 (64%), Gaps = 95/1424 (6%)

Query: 25   EELEAKLGYDLFSEGDKRLGWLLTFASSSLEDEDTRKVYSCIDLYFVSQDGSTFKSKYKF 84
            +E++ K+G+    EG KR GWL+    + ++D +     + +D YF+  DG  FK  + +
Sbjct: 74   DEIDEKMGFPRVQEGGKREGWLVNMRPTLVKDPEWASGKAAVDFYFIQDDGGMFKCTFLY 133

Query: 85   RPYFYAATKEKMEMDVEAYLRRRYESQIADIEILEKEDLDLKNHLSGLHKSYLKISFDTV 144
             PYF  A K   E  VE +LR++YE  I+ I    KEDL L NHL G  + YL++ F  V
Sbjct: 134  EPYFCIACKPGTETAVEEWLRKKYEGLISRIVRDWKEDLKLPNHLMGHRRLYLQLCFRNV 193

Query: 145  QQLMDVKKDLLHVVERNQAKFDAAEAYESILTG--------------------KREQRPQ 184
              L+ V++D++ + + N AK DA +AY  +++                     K   R +
Sbjct: 194  GDLLAVRRDIVPLAQTNGAKRDAVDAYAEVVSATTGAASMDVDFEGELEGSSLKNSGREK 253

Query: 185  DFLDCIVDLREYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLLEKRVDLLQRAEVHVCAF 244
            D  +CI+D+REYDVPY++R AID ++R G WY V+ +   P   + V+ ++RA+  V A+
Sbjct: 254  DPRECILDVREYDVPYYLRVAIDVEIRVGLWYTVTFNEGQPSFSQMVERVKRADPVVMAY 313

Query: 245  DIETTKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKV 304
            DIETTK PLKFPD   D +MMISYM+DGQGYLI NRE V EDI+D EYTPK  +EG F V
Sbjct: 314  DIETTKAPLKFPDQAIDQVMMISYMIDGQGYLITNREIVSEDIDDFEYTPKEGYEGPFTV 373

Query: 305  TNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDKN 364
             N  NE E +R +F+H+QEVKP +  T+NGD+FD+PFL+ RA  +G  M  E GF  D+ 
Sbjct: 374  FNERNEAETIRRFFSHIQEVKPTVMATFNGDFFDFPFLDARAQVNGIDMYLETGFAKDQ- 432

Query: 365  QGECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQ 424
            + E ++    H+DCF WVKRDSYLPQGSQGLKAVT AKLGY+P+E++PE M  +A E+PQ
Sbjct: 433  EDEYKSNNCAHMDCFRWVKRDSYLPQGSQGLKAVTTAKLGYNPIELDPELMTPYAMEQPQ 492

Query: 425  MMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKAN 484
            ++A YSVSDAVATYYLYM YVHPFIFSL  IIP++PDEVLRKGSGTLCE LLMV+A++ +
Sbjct: 493  ILAQYSVSDAVATYYLYMKYVHPFIFSLCNIIPLNPDEVLRKGSGTLCETLLMVEAFRGH 552

Query: 485  VICPNKHQSDPEKFYRNHLLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQLLNNL 544
            +I PN+H+      +  HLL SETY+GGHVE LE+GVFRSD+ T FK+ P+A ++L++ L
Sbjct: 553  IIMPNRHEESHGNMHEGHLLASETYVGGHVEALEAGVFRSDIDTDFKIVPAAVQKLIDEL 612

Query: 545  DRDLQYAIKVEGKMDLESVSNYDEVKNAIMEKLLRLQEEPIREECPLIYHLDVAAMYPNI 604
            D  L + I  E K +LE V+NYD++K  I   L  +++ P R + PLIYHLDVAAMYPNI
Sbjct: 613  DAALTFCIVEESKANLEDVTNYDQIKQEIQTALEVMRDNPRRTDKPLIYHLDVAAMYPNI 672

Query: 605  ILTNRLQPPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYYHLKKQIESE- 663
            +L+NRLQP S+V + VC  CD NRPGKTC R+L+W WRGE F   R ++  +K  +  E 
Sbjct: 673  MLSNRLQPDSMVDESVCAVCDHNRPGKTCDRRLKWAWRGEFFPAHRDEFNMIKHALNQED 732

Query: 664  FVDGTNGHLSKSFLDLPKMEQQSRLKDRLKKYCQKAYKRVLDKPVTELREAGICMRENSF 723
            F     G   + F+DL   EQ + L  RL  Y +K Y +  +  V E REA +C +EN F
Sbjct: 733  FPPKRPGGPKRKFVDLAPSEQTALLHKRLGDYSRKVYAKTRETKV-EHREAIVCQKENPF 791

Query: 724  YVDTVRSFRDRRYEYKGLNKVWKGKLSEAKASGNSI-KIQEAQDMVVLYDSLQLAHKCIL 782
            YVDTVR FRDRRYEYKGL K  KG L      G S+ ++ EA+ M+VLYDSLQLAHKCIL
Sbjct: 792  YVDTVRRFRDRRYEYKGLLKKAKGALDSVLDEGRSLAEVDEAKKMIVLYDSLQLAHKCIL 851

Query: 783  NSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLPGSF 842
            NSFYGYVMRKGARW+SMEMAG+   TG+ IIQ AR L+E+IG+PLELDTDGIWC+LPG F
Sbjct: 852  NSFYGYVMRKGARWHSMEMAGITCLTGSTIIQMARALVEQIGRPLELDTDGIWCMLPGVF 911

Query: 843  PENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEFEV 902
            PENF FK  +  K +  SYPC MLN  V    TN QY    DP +  Y+ HSE SI FE+
Sbjct: 912  PENFKFKLAN-GKAIGFSYPCTMLNHLVYAQFTNHQYHDF-DPETGEYKVHSENSIFFEL 969

Query: 903  DGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKF 962
            DGPYKAMILP+SKEE  L+KKRYAVFNDDG+LAELKGFE+KRRGEL+LIK+FQ++LF+KF
Sbjct: 970  DGPYKAMILPSSKEEDKLLKKRYAVFNDDGSLAELKGFEVKRRGELQLIKIFQSQLFEKF 1029

Query: 963  LHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLADYGEQKSCA 1022
            L GST +ECY+ VA +AN+WLD+LD++ KD+ D EL++ I+E+ +MS++LA+Y  QKS +
Sbjct: 1030 LLGSTTQECYAFVAQIANQWLDVLDSRAKDLTDEELVELIAENRSMSRTLAEYAGQKSTS 1089

Query: 1023 VTTARRLSDFLGDTMVKDKGLRCQYIVACEPQGTPVSERAVPVAIFETDAEIMKFYLRKW 1082
            ++TARRL++FLGD MVKDKGL C++I++ +P G PV+ERAVPVAIF  +  + + YLRKW
Sbjct: 1090 ISTARRLAEFLGDQMVKDKGLACKFIISAKPLGAPVTERAVPVAIFSAEESVKRVYLRKW 1149

Query: 1083 CKTSS--DVGIRSIVDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLYKKVRE 1140
             K +   +  +RSI+DW YY +RL S IQK+ITIPAAMQKV+NPVPR+ HPDWL++++ +
Sbjct: 1150 LKDNGLINFDLRSILDWEYYIERLGSVIQKLITIPAAMQKVANPVPRIAHPDWLHRRIVK 1209

Query: 1141 KEDKFRQRKLVDIFSSLKKDDFLNKTCNAETNLMDENVEDLEDFPKKRRNSVNGPRPIVR 1200
              +KF+Q K+ D F   +  +      + ET  MD  +ED             G +  ++
Sbjct: 1210 LTEKFKQNKMTDFFGKKESKE------DQETQPMD--IEDA--------GGSEGAKTGIQ 1253

Query: 1201 CFEVNNEQKTVKTTDQVDSLRQQLEPSEVSDQQPSSQNAIDTENIDRIVDYKGWLELKKR 1260
             F V  ++   KT        +  EP E+    P+             + Y+ W++  + 
Sbjct: 1254 KFAVIRKKIREKTP-------EVKEPEEIPIPNPN-------------LHYRDWIKAMRP 1293

Query: 1261 KWKDNLDRRKKQKLGSLRASHQANGVSESLGDMINHKEAQRRTGVGSYFRRQETAMTRCH 1320
            +W      RK+++L         NG  ES   +I            S F   +   TR  
Sbjct: 1294 RW------RKRREL--------RNGDGESASVVI-----------PSMFNGAKV-RTRNR 1327

Query: 1321 WQIIQLVPSSQSGVFLAWVVVEGIMVRIPITVPRLFYLNSKDPIVEKF-PG----RRVNK 1375
            W ++Q+ P+S  G F+ W+ V   +V  PI +PR FY++ K P    F PG     +V +
Sbjct: 1328 WDVVQIRPTSTPGRFILWLSVGSELVAAPIRIPRQFYIHMKTPRENLFWPGYYHYEKVTR 1387

Query: 1376 TLPHGRRSFNLIEVMIDEDQFRKESKKLAALLADPEVEVLGWQQ 1419
             LPH     NL ++ + E+ +    +    L  DP V+ +  QQ
Sbjct: 1388 NLPHELPCDNLYKITVREETYHDIREHFIDLTNDPNVDGVYEQQ 1431



 Score =  276 bits (706), Expect = 8e-71,   Method: Compositional matrix adjust.
 Identities = 197/650 (30%), Positives = 321/650 (49%), Gaps = 65/650 (10%)

Query: 1392 DEDQFRKESKKLAAL--LADPE------VEVLGWQQNAAKIGMQRCAASSQWFNERISLA 1443
            D+  F ++  KLA    L+ P+      ++V  WQ + A   M R      W +  ++LA
Sbjct: 1593 DDAYFEQQLPKLAKFPTLSMPKAKAPHTLDVFPWQTHVAAKLMTRYLTMGSWIDRLVTLA 1652

Query: 1444 RY-----AHI-----------------------LWISDDGVPDLGGTSEEDECFADEVHQ 1475
             Y      HI                       LW S    PDLGG  E D   +++  +
Sbjct: 1653 DYYDIPMGHIEGDQPLHCIDVNFARKLIQQDIVLWWSSGERPDLGGI-ENDTHLSEDFPE 1711

Query: 1476 PVLTYPGAYRKVSVELKIHHLSVNALLKSNQVNEMEG-GGLFGFD------QDMNSGPYN 1528
               + PG Y  V +E+ + +L+VN++L+S  VNE+EG GG   FD       + +     
Sbjct: 1712 TEFSSPGVYSNVCLEITLRNLAVNSVLQSQLVNELEGSGGSTAFDSISHTLNEYSKADGQ 1771

Query: 1529 NELCGFDETTSSAPAFRVVKQLIQRCLTDAVTSGNVFADAI-LQHLYRWLCSPHSKLHDP 1587
             EL    E+  S+  F +++ L++  L D V +      A+ + H +RW+ S  S L+DP
Sbjct: 1772 RELT-LAESQISSQTFGIIRSLVKAWLLDKVRNDYESPAALAVDHFWRWVSSTTSGLYDP 1830

Query: 1588 VLHRILHKVMQKVFAMLLAEFRKLGATIIFANFSKVIIDTGKFDLSAAKAYCDSLLKALQ 1647
             +HR +H +M+K F  L+AEF++LG+T+++A+FS +++ T K     A AY   +  A  
Sbjct: 1831 TIHRFIHGLMRKTFIQLIAEFKRLGSTVVYADFSSILLATSK-PPGTAYAYATYIATAAT 1889

Query: 1648 TRELFEWIELEPVHFWHSLLFMDQYNYGGIPARADESLDDDSQVDIVSSWNIAEYLPKEI 1707
            + ELF+ I L    F+  L+FMD+ N   I      + +  + + +   WNI ++LP  I
Sbjct: 1890 SNELFQHIYLNTEKFYDFLIFMDRANMSAIHCEDPLATEPSNHISLEMRWNIQQFLPPAI 1949

Query: 1708 QDHFVLVVSEFMYIPWKHAQKL-AASRASLQEGSSCTPSITVA-AAENFESH-IVQYVKG 1764
             D F  +V  ++   +K  QK  A +R  L+   +  P  T   AA++ ES  IV+++  
Sbjct: 1950 HDDFAQIVQFYLIQLFKIKQKSNAIARKPLRILENGAPDNTQRDAAKSSESESIVEFIAH 2009

Query: 1765 EISSYFTGKLLSIVRDAIHHMKKMNNDQHNSPGV---MQTAANIHKVDAPLEFIKHVCAA 1821
            +++S    K+L  V       ++   D+  +            +H  +  LEFIK VC  
Sbjct: 2010 KLTS----KMLKTVGSMQERYRESMMDEEVAKSFEFPTLPGGYLHFDNPTLEFIKSVCEV 2065

Query: 1822 FALDQNVQHDVLVMRKNLLKYVRVREFAPEAEFRDPCPSFILPNVICSYCNDCRDLDLCR 1881
            F+L +    ++ +M++NLL+ V VREFA EA F++PC    L NV CS+C+  RD D CR
Sbjct: 2066 FSLAKAYDVEIRLMKRNLLELVGVREFAMEAAFKNPCEPLKLSNVPCSHCDVLRDFDFCR 2125

Query: 1882 DMALLAQD------WHCAMPQCGQPYDREVMENALLQIVRQRERLYHLQDLVCIRCNQVK 1935
            D  L A        W+C+   C   YDR  +E  L+ +V+  E  +  QDL C +C Q++
Sbjct: 2126 DPDLAASGQSATPKWYCS--SCNGEYDRVAIEFMLIGVVQAIEASFAQQDLRCPKCKQIR 2183

Query: 1936 AAHLAEQCACAGSFRCKEDASDFRSKMQIFLNIANRQGFQLLQECTSWIL 1985
            + +L+  C C+GS+    +  D R K++  +NIA       L+E +  +L
Sbjct: 2184 SDNLSRHCQCSGSYLYTSNKVDARRKLRTMVNIAIFYNLPRLKELSQMLL 2233


>gi|426193096|gb|EKV43030.1| hypothetical protein AGABI2DRAFT_188103 [Agaricus bisporus var.
            bisporus H97]
          Length = 2227

 Score = 1330 bits (3442), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 689/1426 (48%), Positives = 927/1426 (65%), Gaps = 99/1426 (6%)

Query: 25   EELEAKLGYDLFSEGDKRLGWLLTFASSSLEDEDTRKVYSCIDLYFVSQDGSTFKSKYKF 84
            +E++ K+G+    EG KR GWL+    + ++D +     + +D YF+  DG  FK  + +
Sbjct: 74   DEIDEKMGFPRVQEGGKREGWLVNMRPTLVKDPEWASGKAAVDFYFIQDDGGMFKCTFLY 133

Query: 85   RPYFYAATKEKMEMDVEAYLRRRYESQIADIEILEKEDLDLKNHLSGLHKSYLKISFDTV 144
             PYF  A K   E  VE +LR++YE  I+ I    KEDL L NHL G  + YL++ F  V
Sbjct: 134  EPYFCIACKPGTETAVEEWLRKKYEGLISRIVRDWKEDLKLPNHLMGHRRLYLQLCFRNV 193

Query: 145  QQLMDVKKDLLHVVERNQAKFDAAEAYESILTG--------------------KREQRPQ 184
              L+ V++D++ + + N AK DA +AY  +++                     K   R +
Sbjct: 194  GDLLAVRRDIVPLAQTNGAKRDAVDAYAEVVSATTGAASMDVDFEGELEGSSLKNSIRDK 253

Query: 185  DFLDCIVDLREYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLLEKRVDLLQRAEVHVCAF 244
            D  +CI+D+REYDVPY++R AID ++R G WY V+ +   P   + V+ ++RA+  V A+
Sbjct: 254  DPRECIIDVREYDVPYYLRVAIDVEIRVGLWYTVTFNEGQPSFSQMVERVKRADPVVMAY 313

Query: 245  DIETTKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKV 304
            DIETTK PLKFPD   D +MMISYM+DGQGYLI NRE V EDI+D EYTPK  +EG F V
Sbjct: 314  DIETTKAPLKFPDQAIDQVMMISYMIDGQGYLITNREIVSEDIDDFEYTPKEGYEGPFTV 373

Query: 305  TNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDKN 364
             N  NE E +R +F+H+QEVKP +  T+NGD+FD+PFL+ RA  +G  M  E GF  D+ 
Sbjct: 374  FNERNEAETIRRFFSHIQEVKPTVMATFNGDFFDFPFLDARAQVNGIDMYLETGFAKDQ- 432

Query: 365  QGECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQ 424
            + E ++    H+DCF WVKRDSYLPQGSQGLKAVT AKLGY+P+E++PE M  +A E+PQ
Sbjct: 433  EDEYKSNNCAHMDCFRWVKRDSYLPQGSQGLKAVTTAKLGYNPIELDPELMTPYAMEQPQ 492

Query: 425  MMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKAN 484
            ++A YSVSDAVATYYLYM YVHPFIFSL  IIP++PDEVLRKGSGTLCE LLMV+A++ +
Sbjct: 493  ILAQYSVSDAVATYYLYMKYVHPFIFSLCNIIPLNPDEVLRKGSGTLCETLLMVEAFRGH 552

Query: 485  VICPNKHQSDPEKFYRNHLLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQLLNNL 544
            +I PN+H+      +  HLL SETY+GGHVE LE+GVFRSD+ T FK+ P+A ++L++ L
Sbjct: 553  IIMPNRHEESHGIMHEGHLLASETYVGGHVEALEAGVFRSDIDTDFKIVPAAVQKLIDEL 612

Query: 545  DRDLQYAIKVEGKMDLESVSNYDEVKNAIMEKLLRLQEEPIREECPLIYHLDVAAMYPNI 604
            D  L + I  E K +LE V+NYD++K  I   L  +++ P R + PLIYHLDVAAMYPNI
Sbjct: 613  DAALTFCIVEESKANLEDVTNYDQIKQEIQTALEVMRDNPRRTDKPLIYHLDVAAMYPNI 672

Query: 605  ILTNRLQPPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYYHLKKQIESE- 663
            +L+NRLQP S+V + VC  CD NRPGKTC R+L+W WRGE F   R ++  +K  +  E 
Sbjct: 673  MLSNRLQPDSMVDESVCAVCDHNRPGKTCDRRLKWAWRGEFFPAHRDEFNMIKHALNQED 732

Query: 664  FVDGTNGHLSKSFLDLPKMEQQSRLKDRLKKYCQKAYKRVLDKPVTELREAGICMRENSF 723
            F     G   + F+DL   EQ + L  RL  Y +K Y +  +  V E REA +C +EN F
Sbjct: 733  FPPKRPGGPKRKFVDLAPSEQTALLHKRLGDYSRKVYAKTRETKV-EHREAIVCQKENPF 791

Query: 724  YVDTVRSFRDRRYEYKGLNKVWKGKLSEAKASGNSI-KIQEAQDMVVLYDSLQLAHKCIL 782
            YVDTVR FRDRRYEYKGL K  KG L      G S+ ++ EA+ M+VLYDSLQLAHKCIL
Sbjct: 792  YVDTVRRFRDRRYEYKGLLKKAKGALDSVLDEGRSLAEVDEAKKMIVLYDSLQLAHKCIL 851

Query: 783  NSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLPGSF 842
            NSFYGYVMRKGARW+SMEMAG+   TG+ IIQ AR L+E+IG+PLELDTDGIWC+LPG F
Sbjct: 852  NSFYGYVMRKGARWHSMEMAGITCLTGSTIIQMARALVEQIGRPLELDTDGIWCMLPGVF 911

Query: 843  PENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEFEV 902
            PENF FK  +  K +  SYPC MLN  V    TN QY    DP +  Y+ HSE SI FE+
Sbjct: 912  PENFKFKLAN-GKAIGFSYPCTMLNHLVYAQFTNHQYHDF-DPETGEYKVHSENSIFFEL 969

Query: 903  DGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKF 962
            DGPYKAMILP+SKEE  L+KKRYAVFNDDG+LAELKGFE+KRRGEL+LIK+FQ++LF+KF
Sbjct: 970  DGPYKAMILPSSKEEDKLLKKRYAVFNDDGSLAELKGFEVKRRGELQLIKIFQSQLFEKF 1029

Query: 963  LHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLADYGEQKSCA 1022
            L GST +ECY+ VA +AN+WLD+LD++ KD+ D EL++ I+E+ +MS++LA+Y  QKS +
Sbjct: 1030 LLGSTTQECYAFVAQIANQWLDVLDSRAKDLTDEELVELIAENRSMSRTLAEYAGQKSTS 1089

Query: 1023 VTTARRLSDFLGDTMVKDKGLRCQYIVACEPQGTPVSERAVPVAIFETDAEIMKFYLRKW 1082
            ++TARRL++FLGD MVKDKGL C++I++ +P G PV+ERAVPVAIF  +  + + YLRKW
Sbjct: 1090 ISTARRLAEFLGDQMVKDKGLACKFIISAKPLGAPVTERAVPVAIFSAEESVKRVYLRKW 1149

Query: 1083 CKTSS--DVGIRSIVDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLYKKVRE 1140
             K +   +  +RSI+DW YY +RL S IQK+ITIPAAMQKV+NPVPR+ HPDWL++++ +
Sbjct: 1150 LKDNGLINFDLRSILDWEYYIERLGSVIQKLITIPAAMQKVANPVPRIAHPDWLHRRIVK 1209

Query: 1141 KEDKFRQRKLVDIFSS--LKKDDFLNKTCNAETNLMDENVEDLEDFPKKRRNSVNGPRPI 1198
              +KF+Q K+ D F    LK+D         ET  MD  +ED+         +    +  
Sbjct: 1210 LTEKFKQNKMTDFFGKKELKEDQ--------ETQPMD--IEDV--------GASESAKTG 1251

Query: 1199 VRCFEVNNEQKTVKTTDQVDSLRQQLEPSEVSDQQPSSQNAIDTENIDRIVDYKGWLELK 1258
            ++ F V  ++   KT        +  EP E+    P+             + Y+ W++  
Sbjct: 1252 IQKFAVIRKKVREKTP-------EMKEPEEIPIPNPN-------------LHYRDWIKAM 1291

Query: 1259 KRKWKDNLDRRKKQKLGSLRASHQANGVSESLGDMINHKEAQRRTGVGSYFRRQETAMTR 1318
            + +W      RK+++L         NG  ES   +I            S F   +   TR
Sbjct: 1292 RPRW------RKRREL--------RNGDGESASVVI-----------PSMFNGAKV-RTR 1325

Query: 1319 CHWQIIQLVPSSQSGVFLAWVVVEGIMVRIPITVPRLFYLNSKDPIVEKF-PG----RRV 1373
              W ++Q+ P+S  G F+ W+ V   +V  PI +PR FY++ K P    F PG     +V
Sbjct: 1326 NRWDVVQIRPTSTPGRFILWLSVGSELVPAPIRIPRQFYIHMKTPRENLFWPGYYHYEKV 1385

Query: 1374 NKTLPHGRRSFNLIEVMIDEDQFRKESKKLAALLADPEVEVLGWQQ 1419
             + LPH     NL ++ + E+ + +  +    L  DP V+ +  QQ
Sbjct: 1386 TRNLPHELPCDNLYKITVREETYHEIREHFIDLTNDPNVDGVYEQQ 1431



 Score =  275 bits (704), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 195/650 (30%), Positives = 321/650 (49%), Gaps = 65/650 (10%)

Query: 1392 DEDQFRKESKKLAAL--LADPE------VEVLGWQQNAAKIGMQRCAASSQWFNERISLA 1443
            D+  F ++  KLA    L+ P+      ++V  WQ + A   + R      W +  ++LA
Sbjct: 1584 DDAYFEQQLPKLAKFPTLSMPKAKAPHTLDVFPWQTHVAAKLVTRYLTMGSWIDRLVTLA 1643

Query: 1444 RY-----AHI-----------------------LWISDDGVPDLGGTSEEDECFADEVHQ 1475
             Y      HI                       LW S    PDLGG  E D   +++  +
Sbjct: 1644 DYYDIPMGHIEGDQPLHCIDVNFARKLIQQDIVLWWSSGERPDLGGI-ENDTHLSEDFPE 1702

Query: 1476 PVLTYPGAYRKVSVELKIHHLSVNALLKSNQVNEMEG-GGLFGFD------QDMNSGPYN 1528
               + PG Y  V +E+ + +L+VN++L+S  VNE+EG GG   FD       + +     
Sbjct: 1703 TEFSSPGVYSNVCLEITLRNLAVNSVLQSQLVNELEGSGGSTAFDSISHTLNEYSKADGQ 1762

Query: 1529 NELCGFDETTSSAPAFRVVKQLIQRCLTDAVTSGNVFADAI-LQHLYRWLCSPHSKLHDP 1587
             EL    E+  S+  F +++ +++  L D V   +    A+ + H +RW+ S  S L+DP
Sbjct: 1763 RELT-LAESQISSQTFGIIRSMVKAWLLDKVRKDSESPAALAVDHFWRWVSSTTSGLYDP 1821

Query: 1588 VLHRILHKVMQKVFAMLLAEFRKLGATIIFANFSKVIIDTGKFDLSAAKAYCDSLLKALQ 1647
             +HR +H +M+K F  L+AEF++LG+T+++A+FS +++ T K     A AY   +  A  
Sbjct: 1822 TIHRFIHGLMRKTFIQLIAEFKRLGSTVVYADFSSILLATSK-PPGTAYAYATYIATAAT 1880

Query: 1648 TRELFEWIELEPVHFWHSLLFMDQYNYGGIPARADESLDDDSQVDIVSSWNIAEYLPKEI 1707
            + ELF+ I L    F+  L+FMD+ N   I      + +  + + +   WNI ++LP  I
Sbjct: 1881 SNELFQHIYLNTEKFYDFLIFMDRANMSAIHCEVPLATEPSNHISLEMRWNIQQFLPPAI 1940

Query: 1708 QDHFVLVVSEFMYIPWKHAQKL-AASRASLQEGSSCTPSITVA-AAENFESH-IVQYVKG 1764
             D F  +V  ++   +K  QK  A +R  L+   +  P  T   AA++ ES  IV+++  
Sbjct: 1941 HDDFAQIVQFYLIQLFKIKQKSNAIARKPLRILENGAPDNTQRDAAKSSESESIVEFIAH 2000

Query: 1765 EISSYFTGKLLSIVRDAIHHMKKMNNDQHNSPGV---MQTAANIHKVDAPLEFIKHVCAA 1821
            +++S    K+L  V       ++   D+  +            +H  +  LEFIK VC  
Sbjct: 2001 KLTS----KMLKTVGSMQERYRESMMDEEVAKSFEFPTLPGGYLHFDNPTLEFIKSVCEV 2056

Query: 1822 FALDQNVQHDVLVMRKNLLKYVRVREFAPEAEFRDPCPSFILPNVICSYCNDCRDLDLCR 1881
            F+L +    ++ +M++NLL+ V VREFA EA F++PC    L NV CS+C+  RD D CR
Sbjct: 2057 FSLAKAYDVEIRLMKRNLLELVGVREFAMEAAFKNPCEPLKLSNVPCSHCDVLRDFDFCR 2116

Query: 1882 DMALLAQD------WHCAMPQCGQPYDREVMENALLQIVRQRERLYHLQDLVCIRCNQVK 1935
            D  L A        W+C+   C   YDR  +E  L+ +V+  E  +  QDL C +C Q++
Sbjct: 2117 DPDLAASGQSATPKWYCS--SCNGEYDRVAIEFMLIGVVQAIEASFAQQDLRCPKCKQIR 2174

Query: 1936 AAHLAEQCACAGSFRCKEDASDFRSKMQIFLNIANRQGFQLLQECTSWIL 1985
            + +L+  C C+GS+    +  D R K++  +NIA       L+E +  +L
Sbjct: 2175 SDNLSRHCQCSGSYLYTSNKVDARRKLRTMVNIAIFYNLPRLKESSQMLL 2224


>gi|380472429|emb|CCF46782.1| DNA polymerase epsilon catalytic subunit A [Colletotrichum
            higginsianum]
          Length = 1398

 Score = 1330 bits (3441), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 680/1388 (48%), Positives = 918/1388 (66%), Gaps = 73/1388 (5%)

Query: 27   LEAKLGYDLFSEGDKRLGWLLTFASSSLEDEDTRKVYSCIDLYFVSQDGSTFKSKYKFRP 86
            ++  +G+  +  G ++ GWL+    +S+EDE      + +D YF+  DGS FK+  ++ P
Sbjct: 55   IDENMGFARYEGGKRKEGWLVNVQPTSVEDERIPGGRAALDCYFIEDDGSHFKATVEYEP 114

Query: 87   YFYAATKEKMEMDVEAYLRRRYESQIAD-IEILEKEDLDLKNHLSGLHKSYLKISFDTVQ 145
            YF  A K+  E +VE +L+R     +   I+ +EKEDL + NHL G  +++L++ F  + 
Sbjct: 115  YFLIAVKKGRESEVEEWLKRVPGGGVVKTIKRVEKEDLKMPNHLMGYRRTFLELRFSNIN 174

Query: 146  QLMDVKKDLLHVVERNQAKFDAAEAYESILTGKREQRPQ---------------DFLDCI 190
             LM  +KD++ +  +N+   DA +AY  + T   +                   D  D I
Sbjct: 175  DLMAARKDIMPIASKNRKNVDALDAYAEVQTTNGDFDLFDDSRDDDRRANASFADASDFI 234

Query: 191  VDLREYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLLEKRVDLLQRAEVHVCAFDIETTK 250
            VD+REYDVPYH+R  ID D+R  +WY V +      +    D L  A+  V A+DIETTK
Sbjct: 235  VDIREYDVPYHVRVMIDMDIRVAKWYFVDVKHGVTKITINEDRLAMADPVVMAYDIETTK 294

Query: 251  LPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNVNNE 310
            LPLKFPDA  D +MMISYM+DGQG+LI NRE V EDI D +YTPKPE+ G F + N  +E
Sbjct: 295  LPLKFPDAAIDQVMMISYMIDGQGFLITNREIVSEDISDFDYTPKPEYPGSFMIFNEPDE 354

Query: 311  IELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDKNQGECRA 370
              +L  +F H++E +P +  TYNGD+FDWPF+E RA+ +G  M +E+G++ D ++ + + 
Sbjct: 355  KAVLERFFLHIKEARPTVIATYNGDFFDWPFVEARASVNGIDMYQEIGWKKD-SEDQYKC 413

Query: 371  KFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQMMASYS 430
             ++ H+DCF WV RDSYLPQGS+GLKAVT AKLGYDP E++PE M  +A E+PQ +A YS
Sbjct: 414  SYSVHMDCFHWVNRDSYLPQGSRGLKAVTVAKLGYDPDELDPELMTPYAAERPQTLAEYS 473

Query: 431  VSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVICPNK 490
            VSDAVATYYLYM YVHPFIFSL TI+P+  D+ LRKG+GTLCEMLLMVQAY+  ++ PNK
Sbjct: 474  VSDAVATYYLYMKYVHPFIFSLCTILPLGGDDTLRKGTGTLCEMLLMVQAYQQEIVLPNK 533

Query: 491  HQSDPEKFYRNHLLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQLLNNLDRDLQY 550
            H S  E FY  HLL+SETY+GGHVE +E+GVFR+D+P +F +D  A ++LL +LD  L++
Sbjct: 534  HVSPREAFYDGHLLDSETYVGGHVESIEAGVFRADIPVNFAVDTGAVDELLKDLDAALKF 593

Query: 551  AIKVEGKMDLESVSNYDEVKNAIMEKLLRLQEEPIREECPLIYHLDVAAMYPNIILTNRL 610
            +I VE K  ++ + NYDE++  I  +L  L+E P R E PLIYHLDVA+MYPNI+ TNRL
Sbjct: 594  SITVEEKKSMDDIENYDEIREQIASRLRALKETPNRSERPLIYHLDVASMYPNIMTTNRL 653

Query: 611  QPPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYYHLKKQIESEFVDGT-N 669
            QP S++ +  C ACDFNRPGKTC R++ W WRGE    KR +Y  ++  +E+E   G   
Sbjct: 654  QPDSMIQESDCAACDFNRPGKTCDRRMPWAWRGEYLPAKRDEYNMIRNALENEKFPGKWP 713

Query: 670  GHLSKSFLDLPKMEQQSRLKDRLKKYCQKAYKRVLDKPVTELREAGICMRENSFYVDTVR 729
                ++F DL   EQ + L+ RL+ + QK Y ++ D   T ++EA IC REN FY++TVR
Sbjct: 714  NSPQRTFQDLSPDEQTALLRKRLQIFSQKVYHKIHDS-TTTVKEAIICQRENPFYINTVR 772

Query: 730  SFRDRRYEYKGLNKVWKGKLSEAKASG-NSIKIQEAQDMVVLYDSLQLAHKCILNSFYGY 788
             FRDRRY+YKG  KVWKGK    K SG  S ++  A+ M++L+DSLQLAHK ILNSFYGY
Sbjct: 773  DFRDRRYDYKGKAKVWKGKTESLKQSGATSSEVDAAKKMIILFDSLQLAHKVILNSFYGY 832

Query: 789  VMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLPGSFPENFTF 848
            VMRKG+RWYSMEMAGV   TGA IIQ AR L+E++G+PLELDTDGIWC+LP +FPENF F
Sbjct: 833  VMRKGSRWYSMEMAGVTCLTGATIIQLARSLVERLGRPLELDTDGIWCMLPATFPENFAF 892

Query: 849  KTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEFEVDGPYKA 908
            KTK+  KK+TISYPC MLN  V    TN QYQTLVDP +  YETHS+ SI FEVDGPYKA
Sbjct: 893  KTKN-GKKVTISYPCTMLNHLVHAKFTNHQYQTLVDPKTLKYETHSDNSIFFEVDGPYKA 951

Query: 909  MILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFLHGSTI 968
            M+LP SKEE   +KKRYAVFNDDG+LAELKGFE+KRRGELKLIK+FQ ++F  FL G T+
Sbjct: 952  MVLPTSKEEDKNLKKRYAVFNDDGSLAELKGFEVKRRGELKLIKIFQQQIFKFFLEGETL 1011

Query: 969  EECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLADYGEQKSCAVTTARR 1028
             ECY+AVA VAN+WLD+L ++G  +AD EL++ ISE+ +MSK+L +YG QKS ++TTA+R
Sbjct: 1012 AECYAAVAKVANQWLDVLHSKGSTLADEELMELISENRSMSKTLEEYGSQKSTSITTAKR 1071

Query: 1029 LSDFLGDTMVKDKGLRCQYIVACEPQGTPVSERAVPVAIFETDAEIMKFYLRKWCKTS-S 1087
            L+DFLG+ MVKDKGL C++I+   P+  PV+ERAVPVAIF  +    +FYL+KW K    
Sbjct: 1072 LADFLGEQMVKDKGLNCKFIICARPKNAPVTERAVPVAIFSAEETTKRFYLKKWLKEEPP 1131

Query: 1088 DVGIRSIVDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLYKKVREKEDKFRQ 1147
            D   R+++DW YY +RL S IQK+ITIPAA+QKV NPVPRV HPDWL +++  K+DK +Q
Sbjct: 1132 DTDPRALLDWDYYLERLGSVIQKLITIPAALQKVRNPVPRVAHPDWLQRRINIKDDKMKQ 1191

Query: 1148 RKLVDIFSSLKKDDFLNKTCNAETNLMDENVEDLEDFPKKRRNSVNGPRPIVRCFEVNNE 1207
            +KL D+F+    +D         TNL   +  D+EDF     + +  P+P+     V + 
Sbjct: 1192 KKLTDLFAKGPLEDI--------TNLNGRSAADMEDF----GSQLLKPKPVTSV--VASS 1237

Query: 1208 QKTVKTTDQVDSLRQQLEPSEVSDQQPSSQNAIDTENIDRIVDYKGWLELKKRKWKDNLD 1267
            Q    T+ +    R+   P+E +D  P +  A+  E      DY G+L+ +K+KWK    
Sbjct: 1238 QPAAPTSQK----RKSPGPAENAD--PFA--ALPKEMPSPSDDYVGFLQYQKQKWKIQKQ 1289

Query: 1268 R--RKKQKLGSLRASHQANGVSESLGDMINHKEAQRRTGVGSYFRRQETAMTRCHWQIIQ 1325
               R++Q  G  R ++Q N                    + + F +Q        WQ++ 
Sbjct: 1290 ARIRRRQLFGDRRGNNQNN--------------------IQNTFMKQAHMTFMNTWQLLH 1329

Query: 1326 LVPSSQSGVFLAWVVVEGIMVRIPITVPRLFYLNSKD---PIVEKFPG---RRVNKTLPH 1379
            L P+   G+  A V+++  +  + I VPR  +LN K    P V+  PG    +VN TLP+
Sbjct: 1330 LKPTETPGIVNAHVLIDAKIHSLKIKVPRQVFLNLKSGEMPDVD-IPGCEVEQVNHTLPN 1388

Query: 1380 GRRSFNLI 1387
            GR S +L 
Sbjct: 1389 GRSSVHLF 1396


>gi|400601928|gb|EJP69553.1| DNA polymerase family B [Beauveria bassiana ARSEF 2860]
          Length = 2218

 Score = 1328 bits (3436), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 693/1440 (48%), Positives = 934/1440 (64%), Gaps = 100/1440 (6%)

Query: 13   RTKKQKLIRSAEEELEAKLGYDLFSEGDKRLGWLLTFASSSLEDEDTRKVYSCIDLYFVS 72
            R ++ KL ++ +E     +G+  +  G ++ GWL+    +++ED+      + +D YF+ 
Sbjct: 43   RWERAKLAQTIDE----NMGFARYESGRRKEGWLVNVQPTAIEDDRLPAGRAALDCYFIE 98

Query: 73   QDGSTFKSKYKFRPYFYAATKEKMEMDVEAYLRRRYESQIA-DIEILEKEDLDLKNHLSG 131
            QDGSTFK+  ++ PYF  A K   E +VE +++R     +   I+ +EK+DL + NHL G
Sbjct: 99   QDGSTFKATVEYNPYFLIAVKRGHESEVEEWVKRIAGGGVVKSIQRVEKDDLSMPNHLLG 158

Query: 132  LHKSYLKISFDTVQQLMDVKKDLLHVVERNQAKFDAAEAYESILTGK------------- 178
              ++YL+++F  V  L+  ++D++ + E+N+    A +AY  + T               
Sbjct: 159  YRRTYLQLNFANVNDLLAARRDIMPIAEKNKKNMSAMDAYAEVATANGNGNFDLFDDAQD 218

Query: 179  ----REQRPQDFLDCIVDLREYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLLEKRVDLL 234
                      D  D IVDLREYDVPYH+R  ID D+R G+WY V        +    D  
Sbjct: 219  DQQHNANSYSDASDYIVDLREYDVPYHVRVMIDLDIRVGKWYFVEAKHGITKILPNPDRS 278

Query: 235  QRAEVHVCAFDIETTKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTP 294
              A+  V AFDIETTK+PLKFPDA  D +MMISYM+DGQG+LI NRE + EDI D +YTP
Sbjct: 279  LPADPVVLAFDIETTKMPLKFPDATIDQVMMISYMIDGQGFLITNREIISEDIGDFDYTP 338

Query: 295  KPEFEGYFKVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMS 354
            KPE+ G F + N  +E   L  +F H++E +P +  TYNGD+FDWPF+E RA+ +G  M 
Sbjct: 339  KPEYPGSFMIFNEPDEKATLDRFFLHIKEARPTVIATYNGDFFDWPFVEARASVNGIDMY 398

Query: 355  EELGFQCDKNQGECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPED 414
             E+G++ D +  + +  ++ H+DCF WV RDSYLPQGS+GLKAVT AKLGYDP E++PE 
Sbjct: 399  HEIGWKKDTDD-QYKCNYSVHMDCFHWVNRDSYLPQGSRGLKAVTVAKLGYDPDELDPEL 457

Query: 415  MVRFAKEKPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEM 474
            M+ +A E+PQ +A YSVSDAVATYYLYM YVHPFIFSL TI+P+  D+ LRKG+GTLCEM
Sbjct: 458  MLPYASERPQTLAEYSVSDAVATYYLYMKYVHPFIFSLCTILPLGGDDTLRKGTGTLCEM 517

Query: 475  LLMVQAYKANVICPNKHQSDPEKFYRNHLLESETYIGGHVECLESGVFRSDLPTSFKLDP 534
            LLMVQAY+  ++ PNKH +  E F+  HLLESETY+GGHVE +E+GVFR+D+P +F +D 
Sbjct: 518  LLMVQAYQREIVLPNKHVAPKEAFWDGHLLESETYVGGHVESIEAGVFRADIPVNFSVDT 577

Query: 535  SAYEQLLNNLDRDLQYAIKVEGKMDLESVSNYDEVKNAIMEKLLRLQEEPIREECPLIYH 594
             A ++L+ ++D  L++ I VE K  ++ V NY+EVK  I+ KL  L+E P R E PLIYH
Sbjct: 578  GAIDELIRDIDAALKFVITVEEKKSMDDVENYNEVKAQILAKLNLLKETPNRLERPLIYH 637

Query: 595  LDVAAMYPNIILTNRLQPPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYY 654
            LDVA+MYPNI+ TNRLQP S++T+  C ACDFNRPGKTC R++ W WRGE    KR +Y 
Sbjct: 638  LDVASMYPNIMTTNRLQPDSMITESDCAACDFNRPGKTCDRRMPWAWRGEYLPAKRDEYN 697

Query: 655  HLKKQIESEFVDG--TNGHLSKSFLDLPKMEQQSRLKDRLKKYCQKAYKRVLDKPVTELR 712
             ++  +E+E   G   N  + ++F DL   E+ + ++ RL+ Y QK Y ++ D   T +R
Sbjct: 698  MIRNALENEKFPGKWPNSPM-RTFQDLSADERANLVRKRLQLYSQKVYHKIHDS-TTIVR 755

Query: 713  EAGICMRENSFYVDTVRSFRDRRYEYKGLNKVWKGKLSEAKASGNSI-KIQEAQDMVVLY 771
            EA IC REN FY++TVR FRDRRY+YKG  KVWKGK    K+SG S  +++ A+ MV++Y
Sbjct: 756  EAVICQRENPFYINTVRDFRDRRYDYKGQAKVWKGKTDALKSSGASASEVEAAKKMVIVY 815

Query: 772  DSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDT 831
            DSLQLAHK ILNSFYGYVMRKG+RWYSMEMAGV   TGA IIQ AR L+E++G+PLELDT
Sbjct: 816  DSLQLAHKVILNSFYGYVMRKGSRWYSMEMAGVTCLTGATIIQLARQLVERLGRPLELDT 875

Query: 832  DGIWCVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYE 891
            DGIWC+LP +FPENF FK K+  KKL +SYPCVMLN  V    TN QYQTL DP +  YE
Sbjct: 876  DGIWCMLPATFPENFAFKLKN-GKKLNVSYPCVMLNHLVHDKFTNHQYQTLTDPKTFKYE 934

Query: 892  THSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLI 951
            THS+ SI FEVDGPYKAMILP SKEE   +KKRYAVFNDDG+LAELKGFE+KRRGELKLI
Sbjct: 935  THSDNSIFFEVDGPYKAMILPTSKEEDKNLKKRYAVFNDDGSLAELKGFEVKRRGELKLI 994

Query: 952  KVFQAELFDKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKS 1011
            K+FQ ++F  FL G  + +CY+AVA VANRWLD+L ++G  +AD EL++ ISE+ +MSK+
Sbjct: 995  KIFQQQIFKFFLEGEDLTQCYAAVAKVANRWLDVLHSKGSTLADEELMELISENRSMSKT 1054

Query: 1012 LADYGEQKSCAVTTARRLSDFLGDTMVKDKGLRCQYIVACEPQGTPVSERAVPVAIFETD 1071
            L +YG QKS ++TTA+RL+DFLG+ MVKDKGL C++I+   P+  PV+ERA+PVAIF  +
Sbjct: 1055 LEEYGSQKSTSITTAKRLADFLGEQMVKDKGLNCKFIICSRPRNAPVTERAIPVAIFSAE 1114

Query: 1072 AEIMKFYLRKWCKTS-SDVGIRSIVDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVH 1130
              + + YL+KW K   SD   R+++DW YY +RL S IQK+ITIPAA+QKV NPVPRV H
Sbjct: 1115 ESVKRTYLKKWLKEEPSDTDPRALLDWDYYLERLGSVIQKLITIPAALQKVRNPVPRVAH 1174

Query: 1131 PDWLYKKVREKEDKFRQRKLVDIFSSLKKDDFLNKTCNAETNLMDENVEDLEDFPKKRRN 1190
            PDWL +++  K DK +QRKL D+F      D         TNL    ++D+ED+  K   
Sbjct: 1175 PDWLQRRINIKNDKMKQRKLTDVFHKEPLSDI--------TNLSGSRMDDMEDYGAK--- 1223

Query: 1191 SVNGPRPIVRCFEVNNEQKTVKTTDQVDSLRQQLEPSEVSDQQ---PSSQNAIDTENIDR 1247
             +  P+P       +    T +        R+  EP E +D     P S   +       
Sbjct: 1224 -LLKPKPFNEAIAASQPAATAQK-------RKLPEPVENADPMAALPKSMPGLSE----- 1270

Query: 1248 IVDYKGWLELKKRKWKDNLDR--RKKQKLGSLRASHQANGVSESLGDMINHKEAQRRTGV 1305
              DY G+LE +K+KWK       R++Q  G                        +RR   
Sbjct: 1271 --DYVGFLEYQKKKWKLQKQARIRRRQLFG------------------------ERRGNA 1304

Query: 1306 GSYFRRQETAMTRCH------WQIIQLVPSSQSGVFLAWVVVEGIMVRIPITVPRLFYLN 1359
            GS    Q+T M + H      WQ++QL  +   G+  A+V+++  +  + + VPR  +LN
Sbjct: 1305 GSNL--QQTFMKQAHMTFMSTWQLLQLRATDTPGIVTAFVLIDAKIHTLKVRVPRQVFLN 1362

Query: 1360 --SKD-PIVEKFPG---RRVNKTLPHGRRSFNLIEVMIDEDQFRKESKKLAALLADPEVE 1413
              SKD P VE   G    +VN TLP+G  S +L ++ + ED +  E+ K + L   P VE
Sbjct: 1363 LRSKDLPDVE-IDGCEVEQVNYTLPNGHPSTHLFKLTVLEDTYYNEADKFSLLFNHPSVE 1421



 Score =  261 bits (668), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 172/618 (27%), Positives = 292/618 (47%), Gaps = 64/618 (10%)

Query: 1407 LADPEVEVLGWQQNAAKIGMQRCAASSQWFNERISLARYAHI------------------ 1448
            +AD  +  LGWQ   A+  +        W     +LARY  +                  
Sbjct: 1617 VADSSLPPLGWQAVVARRLVGHYLGLGSWVLHLTALARYGEVPLCNLERDDPRYLIDIAY 1676

Query: 1449 ----------LWISDDGVPDLGGTSEEDECFA-DEVHQPVLTYPGAYRKVSVELKIHHLS 1497
                      LW S    PD  G  ++D     D V  P +  PG Y  V ++L + +L+
Sbjct: 1677 ARRLQANNIVLWWSPGPRPDHAGHEKDDLVGPLDVVKMPNVNKPGTYSSVCIDLDVRNLA 1736

Query: 1498 VNALLKSNQVNEMEGGGLFGFDQDMNSGPYNNELCGFDETTSSAPAFRVVKQLIQRCLTD 1557
            +N +L S+ VNE+EG     F+   +    ++ L    E   S    +V++++++   T+
Sbjct: 1737 INTILTSSLVNELEGADSVSFNPSADG---SDSLAS--ENAFSNAGVQVLREMVKAWWTE 1791

Query: 1558 AVTSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEFRKLGATIIF 1617
            A   G+  AD ++QHL RW+ +P S ++D  LH  +  + +K F  L+ +FR++G+ ++F
Sbjct: 1792 AC-RGSTMADVLVQHLVRWVENPDSFMYDRALHYYVQMMSRKAFQQLMGDFRRVGSQVVF 1850

Query: 1618 ANFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLFMDQYNYGGI 1677
            AN +++I+ T K ++  A AY   ++K+++++ LF +I+LE   +W  L++ D++NYGG 
Sbjct: 1851 ANANRLILQTTKAEVGNAFAYSQYIIKSIRSKPLFHFIDLEIKEYWDYLVWYDEFNYGGK 1910

Query: 1678 PARADESLDDDSQ-VDIVSSWNIAEYLPKEIQDHFVLVVSEFMYIPWKHAQKLAASRASL 1736
              +  E ++ D Q ++ +  W +A +LPK ++  F   V EF  I   H  K    R ++
Sbjct: 1911 ACQ--EVVEADEQPLETIMHWQMAAFLPKRLEPSFQTWVIEF--IELMHGLK----RQAI 1962

Query: 1737 QEGSSCTPSITVAAAENFESHIVQYVKGE-----ISSYFTGKLLSIVRDAIHHMKKMNND 1791
             +  S TP +T     N E    Q + G+     +    +G +    R+ +H     +  
Sbjct: 1963 NDPDS-TPRLTQLPNRNKEKEEGQMILGKSYEKPLKKAISGLIAQQKRELMHPELAGDYS 2021

Query: 1792 QHNSPGVMQTAANIHKVDAPLEFIKHVCAAFALDQNVQHDVLVMRKNLLKYVRVREFAPE 1851
              + PG     +++   +A LE +K +    +LD+N+  +  ++RK LL    VREF+ E
Sbjct: 2022 FPDLPG-----SHLRPRNAILELVKSLMQILSLDKNITLEARLLRKELLALFDVREFSKE 2076

Query: 1852 AEFRDPCPSFILPNVICSYCNDCRDLDLCRDMALLA-------QDWHCAMPQCGQPYDRE 1904
              F +P  S  LP   C  C   RDLD CRD  LL+         W C    CG  YDR 
Sbjct: 2077 GTFTNPSESLKLPQFSCDSCTMARDLDFCRDEDLLSAGGSVSGAGWDCTF--CGAEYDRV 2134

Query: 1905 VMENALLQIVRQRERLYHLQDLVCIRCNQVKAAHLAEQCACAGSFRCKEDASDFRSKMQI 1964
             +E  LL +V      +  QDL C RCN ++     E C C+G ++      D   K+ +
Sbjct: 2135 AIEERLLAMVESWTVEWTTQDLKCTRCNALRLNDFMEHCTCSGEWKETVSREDIGRKLSV 2194

Query: 1965 FLNIANRQGFQLLQECTS 1982
               +A   G ++L +  +
Sbjct: 2195 VRRVAKYYGLRMLSDVAT 2212


>gi|402219536|gb|EJT99609.1| DNA/RNA polymerase [Dacryopinax sp. DJM-731 SS1]
          Length = 2135

 Score = 1327 bits (3435), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 678/1395 (48%), Positives = 900/1395 (64%), Gaps = 108/1395 (7%)

Query: 46   LLTFASSSLEDEDTRKVYSCIDLYFVSQDGSTFKSKYKFRPYFYAATKEKMEMDVEAYLR 105
            ++    + ++D+D     + +D YF+  DG  FK    + PYFY   K   E  VE +L 
Sbjct: 1    MVNMHPTLVKDDDYAGGKAGVDFYFLQDDGGMFKCTMLYEPYFYIGVKNGHETTVEEWLM 60

Query: 106  RRYESQIADIEILEKEDLDLKNHLSGLHKSYLKISFDTVQQLMDVKKDLLHVVERNQAKF 165
            +RYE  I+ I   +KEDL + NHL G  + YL++ F  V  L+ V++D+L + + NQ+K 
Sbjct: 61   KRYEGLISRISREKKEDLKMPNHLLGYRRLYLQLCFRNVSDLLTVRRDMLPLAQSNQSKA 120

Query: 166  DAAEAYESI-------------------LTGKREQRPQDFLDCIVDLREYDVPYHIRFAI 206
             A EAY  +                   + G R+  P++   CI D+REYDVPY++R  I
Sbjct: 121  SAIEAYAEVVGAADMGIEMEMTDGVAPEIRGGRKVEPEE---CIHDIREYDVPYYLRVGI 177

Query: 207  DNDVRCGQWYDVSISSTGPLLEKRVDLLQRAEVHVCAFDIETTKLPLKFPDADYDIIMMI 266
            D D+R G+WY V+ +S    L +  + + RAE  V AFDIET+K PLKFPD   D IMMI
Sbjct: 178  DKDIRVGKWYTVTAASGEITLAEMPERVARAEPVVLAFDIETSKAPLKFPDQSLDQIMMI 237

Query: 267  SYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNVNNEIELLRLWFAHMQEVKP 326
            SYM+DGQG+LI NRE V EDI+D EYTPK  FEG F V N  +E  L+R +F H+Q  KP
Sbjct: 238  SYMIDGQGFLITNREIVSEDIDDFEYTPKEGFEGPFTVYNEKDEEALIRRFFTHIQSAKP 297

Query: 327  GIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDKNQGECRAKFACHLDCFAWVKRDS 386
             +  TYNGD FD+PF++ RA HHG  M  E+GF  D N+ E +++   H+DCF WVKRDS
Sbjct: 298  TVIATYNGDSFDFPFVQARAQHHGIDMLTEIGFAKD-NEDEFKSRPCAHMDCFRWVKRDS 356

Query: 387  YLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQMMASYSVSDAVATYYLYMTYVH 446
            YLPQGSQGLKAVT AKLGY+P+E++PE M  +A E+PQ++A YSVSDAVATYYLYM YVH
Sbjct: 357  YLPQGSQGLKAVTTAKLGYNPIELDPELMTPYAMEQPQVLAQYSVSDAVATYYLYMKYVH 416

Query: 447  PFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVICPNKHQSDPEKFYRNHLLES 506
            PF+FSL  IIP++PDEVLRKG+GTLCE LLMVQAY++ VI PN+H+      +  HLL  
Sbjct: 417  PFVFSLCNIIPLNPDEVLRKGTGTLCETLLMVQAYQSAVIMPNRHEEPFGNTHEGHLLSF 476

Query: 507  ETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQLLNNLDRDLQYAIKVEGKMDLESVSNY 566
            ETY+GGHVE LE+GVFR+D+PT FK+ P+A +QL+++LDR LQ+AI  E K  L+ V+NY
Sbjct: 477  ETYVGGHVEALEAGVFRNDIPTHFKIVPAAAQQLIDDLDRALQFAIVTEFKTTLDDVTNY 536

Query: 567  DEVKNAIMEKLLRLQEEPIREECPLIYHLDVAAMYPNIILTNRLQPPSIVTDEVCTACDF 626
            D VK  I   L  L++ P+R++ PLIYHLDVAAMYPNI+L+NRLQP S+V + +C  CD 
Sbjct: 537  DIVKAQITALLEELRDNPMRQDKPLIYHLDVAAMYPNIMLSNRLQPDSVVDEAMCAVCDH 596

Query: 627  NRPGKTCLRKLEWVWRGEIFMGKRSDYYHLKKQIESE-FVDGTNGHLSKSFLDLPKMEQQ 685
            NRPGK C R++ W WRGE F  KR +   ++  +  E F     G   + ++DL   EQ 
Sbjct: 597  NRPGKECDRRMTWAWRGEFFPAKRDEVNMIRFALNKEMFPPKFPGGSKRRYVDLSPSEQN 656

Query: 686  SRLKDRLKKYCQKAYKRVLDKPVTELREAGICMRENSFYVDTVRSFRDRRYEYKGLNKVW 745
            + L  R+  Y ++ YK+  D  V  ++EA IC REN FY++TVRSFRDRRYEYKGL+K W
Sbjct: 657  ALLHKRIGDYSRRVYKKTKDTEVV-VKEAIICQRENPFYINTVRSFRDRRYEYKGLHKTW 715

Query: 746  KGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVV 805
            K  L +AK++ +  ++ EA  M+VLYDSLQLAHKCILNSFYGYVMRKGARW+SMEMAG+ 
Sbjct: 716  KKNLDKAKSAASMTQMDEANKMIVLYDSLQLAHKCILNSFYGYVMRKGARWHSMEMAGIT 775

Query: 806  TYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLPGSFPENFTFKTKDLKKKLTISYPCVM 865
              TGA IIQ AR L+E+IG+PLELDTDGIWC+LPG+FP+NF  +TK   KKL +SYPC M
Sbjct: 776  CLTGANIIQMARQLVEQIGRPLELDTDGIWCMLPGTFPDNFFLETKG-GKKLQLSYPCTM 834

Query: 866  LNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEFEVDGPYKAMILPASKEEGILIKKRY 925
            LN  V    TN QY  LVDP +  Y  HSE SI FE+DGPYKAMILP+SKEE  L+KKRY
Sbjct: 835  LNHLVHDRFTNHQYHDLVDPATGAYAVHSENSIFFELDGPYKAMILPSSKEEDKLLKKRY 894

Query: 926  AVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFLHGSTIEECYSAVAAVANRWLDL 985
            AVFN+DG+LAELKGFE+KRRGEL+LIK+FQ+E+F+KFL G T+++CY+ VA VA+ WLD+
Sbjct: 895  AVFNEDGSLAELKGFEVKRRGELQLIKIFQSEIFEKFLGGETLDQCYAEVAKVADSWLDV 954

Query: 986  LDNQGKDIADSELIDYISESSTMSKSLADYGEQKSCAVTTARRLSDFLGDTMVKDKGLRC 1045
            L  + + + D EL+D I E  +MSK+LA+YG QKS A++TA+RL++FLG  MVKDKGL C
Sbjct: 955  LYTKAEALTDQELVDLIGEYRSMSKTLAEYGAQKSTAISTAKRLAEFLGAQMVKDKGLAC 1014

Query: 1046 QYIVACEPQGTPVSERAVPVAIFETDAEIMKFYLRKWCKTSS--DVGIRSIVDWSYYKQR 1103
             +I++ +PQG PV+ERAVPVAIF  +  I + YLRKW K +S  +  +RSI+DW YY +R
Sbjct: 1015 NFIISAKPQGAPVTERAVPVAIFSAEESIKRHYLRKWLKDNSLINFDMRSILDWDYYIER 1074

Query: 1104 LSSAIQKIITIPAAMQKVSNPVPRVVHPDWLYKKVREKEDKFRQRKLVDIFSSLKKDDFL 1163
            L   IQK+ITIPAA QKVSNPVPRV HPDWL+++V  +EDKF+Q K+ + F S  K    
Sbjct: 1075 LGGVIQKLITIPAAFQKVSNPVPRVRHPDWLHRRVAAQEDKFQQHKITNFFQSGPK---- 1130

Query: 1164 NKTCNAETNLMDENVEDLEDFPKKRRNSVNGPRPIVRCFEVNNEQKTVKTTDQVDSLRQQ 1223
                      +     D+ED    +     G  P           K    T +V S + +
Sbjct: 1131 ----------VVAASADIEDMAGSQ-----GKVP---------RAKVAVVTKKVPSKKTK 1166

Query: 1224 LEPSEVSDQQPSSQNAIDTENIDRIVDYKGWLELKKRKWKDNLDRRKKQKLGSLRASHQA 1283
              P                   D   +Y GWL+  +R WK     +++++LG   A    
Sbjct: 1167 PLP-------------------DLKKNYPGWLKAMRRIWK----VKREERLGGSTA---- 1199

Query: 1284 NGVSESLGDMINHKEAQRRTGVGSYFRRQETAMTRCHWQIIQLVPSSQSGVFLAWVVVEG 1343
                     MI          V + FR  +    R  W I Q+ P+ + G F+ W+  + 
Sbjct: 1200 ---------MI----------VPAMFRGTQVREARS-WDIFQIRPTDKPGRFIMWLHTDT 1239

Query: 1344 IMVRIPITVPRLFYLNSKD-----PIVEKFPGRRVNKTLPHGRRSFNLIEVMIDEDQFRK 1398
              + IP+ VPR FY+N K+       +  +    + +TLPH +   NL  + + E  + +
Sbjct: 1240 EFMPIPLRVPRQFYVNYKEMPETGTFLPSYLAENLTRTLPHDQPCLNLFRITVPESLYLE 1299

Query: 1399 ESKKLAALLADPEVE 1413
            E      L+A+  V+
Sbjct: 1300 EESHFTGLIANVNVD 1314



 Score =  332 bits (851), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 199/623 (31%), Positives = 320/623 (51%), Gaps = 59/623 (9%)

Query: 1414 VLGWQQNAAKIGMQRCAASSQWFNERISLARYAHI------------------------- 1448
            V  WQ+      M R  +   W  + I  A Y  +                         
Sbjct: 1518 VFSWQKIVVSHMMSRYVSMGSWLYQEIQRAAYHDVPVGNVPADRELFYADVDFSRRLMDQ 1577

Query: 1449 ---LWISDDGVPDLGGTSEEDECFADEVHQPVLTYPGAYRKVSVELKIHHLSVNALLKSN 1505
               LW S    PDLGG  ++    ADEV  P ++ PG +  V+V L++  L+V+A+++S 
Sbjct: 1578 DILLWWSYTNRPDLGGREDDSNISADEVSNPEISAPGCFSNVAVALQLQQLAVDAVMQSA 1637

Query: 1506 QVNEMEGG-------GLFGFDQDMNSGPYNNELCGFDETTSSAPAFRVVKQLIQRCLTDA 1558
             VNEMEG        G    + D  +   ++      +    A  F ++K  ++    D 
Sbjct: 1638 LVNEMEGSVGGNAAIGAASHNLDEYTNGASDAAITLGDIVLPASTFAILKATVRSWHGDM 1697

Query: 1559 VTSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEFRKLGATIIFA 1618
            V  GN+ A  +L HL+RWLCS  +++ DP+L R +H++M+K F  LLAEFR+LG ++I A
Sbjct: 1698 V-HGNMDAKTVLDHLWRWLCSTDARMFDPILQRFVHQLMKKTFLQLLAEFRRLGCSVISA 1756

Query: 1619 NFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLFMDQYNYGGIP 1678
            +FS+VI+ T K     A A+   LL A++ +ELF ++ L     +  +LFMD+ N+GG  
Sbjct: 1757 DFSQVILLTSK-PPGTASAFLTYLLTAVENQELFRYVNLRIDRVYDFMLFMDRSNFGGFV 1815

Query: 1679 ARADESLDD-DSQVDIVSSWNIAEYLPKEIQDHFVLVVSEFMYIPWKHAQKLAASRASLQ 1737
                 +LD  D    ++  WNI  +LP  +Q+ F  ++ +FM   ++  QK   SR  L+
Sbjct: 1816 HEDLAALDKPDGTAALMMCWNIQRFLPPTLQNDFAQIIRKFMTDLYEDKQKRGHSRTPLR 1875

Query: 1738 EGSSCTPSIT-VAAAENFESHIVQYVKGEISSYFTGKLLSIVRDAIHHMKKMNNDQHNSP 1796
               + T   T VA A+  +   V+ V+  +S+  T +LL+ V+  +   +K  +    +P
Sbjct: 1876 VIQNLTQDQTAVATADKMQE--VERVRNYVSNRLTRRLLAKVQQVVERYEK--STMSEAP 1931

Query: 1797 GV-------MQTAANIHKVDAPLEFIKHVCAAFALDQNVQHDVLVMRKNLLKYVRVREFA 1849
             V       +   + I+    P+EF+K VC    L +++  +V V+++NLL  V VREFA
Sbjct: 1932 EVEEDFEFPLLPGSYINFTSPPVEFVKFVCEVLRLHKDLSLEVGVLKRNLLDLVHVREFA 1991

Query: 1850 PEAEFRDPCPSFILPNVICSYCNDCRDLDLCRDMALL-------AQDWHCAMPQCGQPYD 1902
             EA+F++PC SF LP VIC+ C+  RD+D CRD  L         + W CA   CG PYD
Sbjct: 1992 DEAQFKNPCESFKLPMVICTQCSSQRDMDFCRDEDLFPDPGSSNPKTWACA--DCGHPYD 2049

Query: 1903 REVMENALLQIVRQRERLYHLQDLVCIRCNQVKAAHLAEQCACAGSFRCKEDASDFRSKM 1962
            R  +E +L+  VR+    + LQD+ C +C Q+K+ +L+  CAC+G++       + R ++
Sbjct: 2050 RAAIEVSLIDSVRRLVTAFQLQDMRCGKCKQIKSDNLSAFCACSGTYGLTLGKQETRRRL 2109

Query: 1963 QIFLNIANRQGFQLLQECTSWIL 1985
            +  +N+A   G  LL++ T  +L
Sbjct: 2110 RTVVNVAAFHGLSLLRDYTEGVL 2132


>gi|429852705|gb|ELA27829.1| DNA polymerase catalytic subunit a [Colletotrichum gloeosporioides
            Nara gc5]
          Length = 2207

 Score = 1326 bits (3432), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 684/1417 (48%), Positives = 930/1417 (65%), Gaps = 100/1417 (7%)

Query: 26   ELEAKLGYDLFSEGDKRLGWLLTFASSSLEDEDTRKVYSCIDLYFVSQDGSTFKSKYKFR 85
            +++  +G+  +  G ++ GWL+    +S+ED+      + +D YF+  DG TFK+  ++ 
Sbjct: 53   QIDENMGFARYEGGKRKEGWLVNVQPTSVEDDRNPSGRAALDCYFLEDDGQTFKATVEYD 112

Query: 86   PYFYAATKEKMEMDVEAYLRRRYESQIA-DIEILEKEDLDLKNHLSGLHKSYLKISFDTV 144
            PYF  A K+  E +VE +++R     +   I+ +EKEDL + NHL G  +++L++ F  V
Sbjct: 113  PYFLIAVKKGRESEVEEWIKRVPGGGVVKTIKRVEKEDLKMPNHLLGYRRTFLELRFANV 172

Query: 145  QQLMDVKKDLLHVVERNQAKFDAAEAYESILTGKREQRPQ---------------DFLDC 189
              LM  +KD++ +  +N+   DA +AY  ++T   +                   D  D 
Sbjct: 173  NDLMAARKDIMPIAAKNRKNVDAMDAYAEVVTTNGDFDLFDDSRDDDRRANASFADASDF 232

Query: 190  IVDLREYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLLEKRVDLLQRAEVHVCAFDIETT 249
            IVD+REYDVPYH+R  ID D+R G+WY V +      +    D L  A+  V A+DIETT
Sbjct: 233  IVDIREYDVPYHVRVMIDMDIRVGKWYFVDVKHGVTKVTINEDRLAMADPVVMAYDIETT 292

Query: 250  KLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNVNN 309
            KLPLKFPDA  D +MMISYM+DGQG+LI NRE + EDI D +YTPKPE+ G F + N  +
Sbjct: 293  KLPLKFPDAAIDQVMMISYMIDGQGFLITNREIISEDIGDFDYTPKPEYPGPFMIFNEPD 352

Query: 310  EIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCD-KNQGEC 368
            E  +L  +F H++E +P +  TYNGD+FDWPF+E RA+ +G  M +E+G++ + ++Q +C
Sbjct: 353  EKAVLERFFLHIKEARPTVIATYNGDFFDWPFVEARASFNGIDMYQEIGWKKNSEDQYQC 412

Query: 369  RAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQMMAS 428
               ++ H+DCF WV RDSYLPQGS+GLKAVT AKLGYDP E++PE M  +A+E+PQ +A 
Sbjct: 413  --NYSVHMDCFHWVNRDSYLPQGSRGLKAVTVAKLGYDPDELDPELMTPYAQERPQTLAE 470

Query: 429  YSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVICP 488
            YSVSDAVATYYLYM YVHPFIFSL TI+P+  D+ LRKG+GTLCEMLLMVQAY+  ++ P
Sbjct: 471  YSVSDAVATYYLYMKYVHPFIFSLCTILPLGGDDTLRKGTGTLCEMLLMVQAYQKEIVLP 530

Query: 489  NKHQSDPEKFYRNHLLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQLLNNLDRDL 548
            NKH +  E FY  HLL+SETY+GGHVE +E+GVFR+D+P +F +DP A ++LL +LD  L
Sbjct: 531  NKHVAPREAFYEGHLLDSETYVGGHVESIEAGVFRADIPVNFAVDPGAVDELLKDLDAAL 590

Query: 549  QYAIKVEGKMDLESVSNYDEVKNAIMEKLLRLQEEPIREECPLIYHLDVAAMYPNIILTN 608
            +++I VE +  ++ + NYDE+K  I  KL  L+E P R E PLIYHLDVA+MYPNI+ TN
Sbjct: 591  KFSITVEEQKSMDDIVNYDEIKEQIAGKLRSLKETPNRSERPLIYHLDVASMYPNIMTTN 650

Query: 609  RLQPPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYYHLKKQIESEFVDG- 667
            RLQP S++ +  C ACDFNRPGKTC R+L W WRGE    KR +Y  ++  +E+E   G 
Sbjct: 651  RLQPDSMIQESDCAACDFNRPGKTCDRRLPWAWRGEYLPAKRDEYNMIRNALENEKFPGK 710

Query: 668  -TNGHLSKSFLDLPKMEQQSRLKDRLKKYCQKAYKRVLDKPVTELREAGICMRENSFYVD 726
              N  + ++F DL   EQ + L+ RL+ Y QK Y ++ D   T ++EA IC REN FY++
Sbjct: 711  WPNSPM-RTFQDLSPDEQTALLRKRLQLYSQKVYHKIHDS-TTIVKEAIICQRENPFYIN 768

Query: 727  TVRSFRDRRYEYKGLNKVWKGKLSEAKASG-NSIKIQEAQDMVVLYDSLQLAHKCILNSF 785
            TVR FRDRRY+YKG  KVWKGK    K+SG  S ++  A+ M++L+DSLQLAHK ILNSF
Sbjct: 769  TVRDFRDRRYDYKGKAKVWKGKTESLKSSGATSSEVDAAKKMIILFDSLQLAHKVILNSF 828

Query: 786  YGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLPGSFPEN 845
            YGYVMRKG+RWYSMEMAGV   TGA IIQ AR L+E++G+PLELDTDGIWC+LP +FPEN
Sbjct: 829  YGYVMRKGSRWYSMEMAGVTCLTGATIIQLARSLVERLGRPLELDTDGIWCMLPATFPEN 888

Query: 846  FTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEFEVDGP 905
            F FKTK+  KK+T+SYPC MLN  V    TN QYQTL DP +  YETHS+ SI FEVDGP
Sbjct: 889  FAFKTKN-GKKVTVSYPCTMLNHLVHAQFTNHQYQTLKDPKTFKYETHSDNSIFFEVDGP 947

Query: 906  YKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFLHG 965
            YKAMILP SKEE   +KKRYAVFNDDG+LAELKGFE+KRRGELKLIK+FQ ++F  FL G
Sbjct: 948  YKAMILPTSKEEDKNLKKRYAVFNDDGSLAELKGFEVKRRGELKLIKIFQQQIFKFFLEG 1007

Query: 966  STIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLADYGEQKSCAVTT 1025
            +T+ ECY+AVA VAN+WLD+L ++G  +AD EL++ ISE+ +MSK+L +YG QKS ++TT
Sbjct: 1008 TTLAECYTAVAKVANQWLDVLHSKGVTLADEELMELISENRSMSKTLEEYGSQKSTSITT 1067

Query: 1026 ARRLSDFLGDTMVKDKGLRCQYIVACEPQGTPVSERAVPVAIFETDAEIMKFYLRKWCKT 1085
            A+RL+DFLG+ MVKDKGL C++I+   P+  PV+ERAVPVAIF  +    +FYL+KW K 
Sbjct: 1068 AKRLADFLGEQMVKDKGLNCKFIICARPKNAPVTERAVPVAIFSAEETTKRFYLKKWLKE 1127

Query: 1086 S-SDVGIRSIVDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLYKKVREKEDK 1144
              +D   R+++DW YY +RL S IQK+ITIPAA+QKV NPVPRV HPDWL +++  KEDK
Sbjct: 1128 EPADTDPRALLDWDYYLERLGSVIQKLITIPAALQKVRNPVPRVPHPDWLQRRINIKEDK 1187

Query: 1145 FRQRKLVDIFSSLKKDDFLNKTCNAETNLMDENVEDLEDFPKKRRNSVNGPRPIVRCFEV 1204
             +Q+KL D+F+    +D         TNL   N+ D+EDF                  ++
Sbjct: 1188 MKQKKLTDLFTKGPLEDI--------TNLNGRNLNDMEDFGS----------------QL 1223

Query: 1205 NNEQKTVKTTDQVDSLRQQL-EPSEVSDQQPSSQNAIDTENIDRIVDYKGWLELKKRKWK 1263
               +   +  D   +L + +  PSE                     DY G+L+ +K+KWK
Sbjct: 1224 LKPKTPAENADPFAALPKVMPSPSE---------------------DYVGFLQYQKQKWK 1262

Query: 1264 DNLDRR-KKQKLGSLRASHQANGVSESLGDMINHKEAQRRTGVGSYFRRQETAMTRCHWQ 1322
                 R ++++L   R  +Q+N                    + + F +Q        WQ
Sbjct: 1263 IQKQARIRRRQLFGDRRGNQSN--------------------IQATFMKQAHMTFMNTWQ 1302

Query: 1323 IIQLVPSSQSGVFLAWVVVEGIMVRIPITVPRLFYLNSKD---PIVEKFPG---RRVNKT 1376
            ++ L  +   GV  A V+++  +  + I VPR  +LN K    P V+  PG    +VN T
Sbjct: 1303 LLHLKATETPGVVNAHVLIDAKIHTLKIKVPRQVFLNLKSGDMPDVD-IPGCEVEQVNHT 1361

Query: 1377 LPHGRRSFNLIEVMIDEDQFRKESKKLAALLADPEVE 1413
            LP+G  S +L ++ + ED +  E+ K + L   P VE
Sbjct: 1362 LPNGHSSVHLFKLTVPEDTYFAEADKFSLLFNHPSVE 1398



 Score =  240 bits (612), Expect = 8e-60,   Method: Compositional matrix adjust.
 Identities = 168/621 (27%), Positives = 281/621 (45%), Gaps = 62/621 (9%)

Query: 1408 ADPEVEVLGWQQNAAKIGMQRCAASSQWFNERISLARYAHI------------------- 1448
            AD  +  LGWQ   AK  +        W     +LARY  +                   
Sbjct: 1595 ADSSLPPLGWQAVVAKRLVGHYLGLGSWILHLTTLARYGDVPLCNLEREDPRFLIDITYA 1654

Query: 1449 ---------LWISDDGVPDLGGTSEEDECFA-DEVHQPVLTYPGAYRKVSVELKIHHLSV 1498
                     LW S    PD  G  ++D       V  P +  PG +  V ++L++ +L++
Sbjct: 1655 RRLQNNNIVLWWSGSPRPDHAGYEKDDITGPLQTVQMPSVNNPGTFSSVCIDLEVRNLAI 1714

Query: 1499 NALLKSNQVNEMEGGGLFGFDQDMNSGPYNNELCGFDETTSSAPAFRVVKQLIQRCLTDA 1558
            N +L S+ +NE+EG     F+   +S     E     E T +     V++++++    +A
Sbjct: 1715 NTILTSSLINELEGADSISFNPAGDSAA--GEEVITSEGTFANAGVLVLREMVKSWWQEA 1772

Query: 1559 VTSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEFRKLGATIIFA 1618
               G+  AD ++QHL RW+ +P S L+D  LH  +  + +K F  L+A+FR++G+ ++FA
Sbjct: 1773 C-KGDTMADVMVQHLVRWVENPDSFLYDRALHYYVQMMSRKAFQQLMADFRRVGSQVVFA 1831

Query: 1619 NFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLFMDQYNYGGIP 1678
            N +++++ T K ++  A AY   ++K+++++ LF +I+LE   +W  L++ D++NYGG  
Sbjct: 1832 NSNRLLLQTTKAEVGTAYAYSQYIIKSIKSKPLFHFIDLEIKEYWDYLVWYDEFNYGG-- 1889

Query: 1679 ARADESLDDDSQ-VDIVSSWNIAEYLPKEIQDHFVLVVSEFMYIPWKHAQKLAASRASLQ 1737
                E ++ + Q +D V  W +A +LP  +Q  F   V EF+ +       L   +    
Sbjct: 1890 KACQEVVEAEFQKLDTVMHWQMATFLPIRLQPTFQDWVIEFIQL----MHGLKRPQGEFD 1945

Query: 1738 EGSSCTPSITVAAAENFESHIVQYVKGEISSYFTGKLLSIV----RDAIHHMKKMNNDQH 1793
                 T     + AE  E  I+   K E        + ++V    R+ +H     +    
Sbjct: 1946 STPRLTQLPQKSLAEGAEGQIILGKKFE--KPLKKDIANLVNLQKRELLHPELAGDYSFP 2003

Query: 1794 NSPGVMQTAANIHKVDAPLEFIKHVCAAFALDQNVQHDVLVMRKNLLKYVRVREFAPEAE 1853
              PG     A++   +A LE +K +    +LD+NV  +  ++RK LL    VREF+ E  
Sbjct: 2004 QLPG--SHLAHLSSRNAVLELVKALMQVLSLDKNVTLEARLLRKELLAMFDVREFSKEGA 2061

Query: 1854 FRDPCPSFILPNVICSYCNDCRDLDLCRDMALLAQ-------------DWHCAMPQCGQP 1900
            F++P  S  L  + C  C   RDLD CRD  LL +              W C    C   
Sbjct: 2062 FQNPSESLKLLQLSCDSCTMARDLDFCRDEDLLPEVGPDGKRLGAETRPWRCTF--CEAE 2119

Query: 1901 YDREVMENALLQIVRQRERLYHLQDLVCIRCNQVKAAHLAEQCACAGSFRCKEDASDFRS 1960
            YDR  +E  LL  V      +  QDL C +C  ++     E C C+G +       +   
Sbjct: 2120 YDRNAIEEMLLAQVEAFVVEWSTQDLKCTKCGALRLNEFMEHCTCSGEWVESVRRQEILR 2179

Query: 1961 KMQIFLNIANRQGFQLLQECT 1981
            K+ ++ N+A   G ++L E T
Sbjct: 2180 KVGVYWNVAKFFGLRMLGEVT 2200


>gi|358056521|dbj|GAA97490.1| hypothetical protein E5Q_04168 [Mixia osmundae IAM 14324]
          Length = 2251

 Score = 1326 bits (3431), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 677/1433 (47%), Positives = 926/1433 (64%), Gaps = 119/1433 (8%)

Query: 25   EELEAKLGYDLFSEGDK-RLGWLLTFASSSLEDEDTRKVYSCIDLYFVSQDGSTFKSKYK 83
            + L+ +LG+  FSEG K ++GWL+    + ++D+      + +D YF+  DG  FK+   
Sbjct: 70   DSLDERLGFYRFSEGGKSKVGWLVNMHPTLIKDDLHSGGRAAVDFYFIQDDGELFKATMV 129

Query: 84   FRPYFYAATKEKMEMDVEAYLRRRYESQIADIEILEKEDLDLKNHLSGLHKSYLKISFDT 143
            + PYF+ A K+  E  VE +L +R+E+Q+  +E   K+DL L NHL G  ++++++ F  
Sbjct: 130  YEPYFFLACKKGTETQVEEWLNKRFETQLVRVERQRKDDLKLPNHLLGYSRTFIQLIFRN 189

Query: 144  VQQLMDVKKDLLHVVERNQAKFDAAEAYESILTGKREQRPQDFL---------------- 187
            V  L  V+++LL +  +N AK  A +AY  ++ G       + +                
Sbjct: 190  VNDLQLVRRELLPIASKNAAKLSAVDAYAEVIAGDSTANLANLVLVDDFAGVDIEEGAAF 249

Query: 188  ----------------DCIVDLREYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLLEKRV 231
                            + I+D+REYD+PY++R AID ++R G WY VS       LE   
Sbjct: 250  VAKASTRALGSAADPSEQILDVREYDIPYYLRVAIDKEIRVGLWYTVSSQQGDITLECIT 309

Query: 232  DLLQRAEVHVCAFDIETTKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLE 291
            + ++RA+  V AFDIETTK PLKFPDA +D IMMISYM+DGQG+LI NRE V EDI+D E
Sbjct: 310  ERVERADPVVLAFDIETTKGPLKFPDAAHDQIMMISYMIDGQGFLITNREIVSEDIDDFE 369

Query: 292  YTPKPEFEGYFKVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGF 351
            YTPK E+EG F V N  +E  LL  +F H++E KP +  TYNGD FDWPF+  RAA  G 
Sbjct: 370  YTPKAEYEGPFMVFNEADESALLARFFEHVREAKPTVIATYNGDSFDWPFVCNRAAARGI 429

Query: 352  KMSEELGFQCDKNQGECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVN 411
             M  E+G++ D  + E ++    H+DCF WVKRDSYLPQGSQGLKAVT AKLGY+P+E++
Sbjct: 430  DMYREIGWKIDA-EDEFKSANCIHMDCFRWVKRDSYLPQGSQGLKAVTVAKLGYNPIELD 488

Query: 412  PEDMVRFAKEKPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTL 471
            PE M  +A EKPQ++A YSVSDAVATYYLYM YVHPFIFSL  IIP++PDEVLRKGSGTL
Sbjct: 489  PELMTPYAVEKPQILAQYSVSDAVATYYLYMKYVHPFIFSLCNIIPLNPDEVLRKGSGTL 548

Query: 472  CEMLLMVQAYKANVICPNKHQSDPEKFYRNHLLESETYIGGHVECLESGVFRSDLPTSFK 531
            CE LLMV+AY+  +I PN+H       Y  HLLESETY+GGHVE LE+GVFR+D+P  F+
Sbjct: 549  CETLLMVEAYRGKIIMPNRHVEPTANMYEGHLLESETYVGGHVEALEAGVFRNDIPVDFR 608

Query: 532  LDPSAYEQLLNNLDRDLQYAIKVEGKMDLESVSNYDEVKNAIMEKLLRLQEEPIREECPL 591
            + P A ++L++ LD+ L +++K EGK+DL  V NYDEV+  I+  L  L+++P+R++ PL
Sbjct: 609  IAPDAIQKLIDELDQALTFSLKEEGKIDLADVENYDEVRGGILSMLEELRDKPMRQDKPL 668

Query: 592  IYHLDVAAMYPNIILTNRLQPPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEIFMGKRS 651
            IYHLDVAAMYPNI+L+NRLQP S+V + +C ACD+NRPGKTC R++ W WRGE F  K  
Sbjct: 669  IYHLDVAAMYPNIMLSNRLQPDSVVDESMCAACDYNRPGKTCDRRMTWAWRGEFFPAKLD 728

Query: 652  DYYHLKKQIESE-FVDGTNGHLSKSFLDLPKMEQQSRLKDRLKKYCQKAYKRVLDKPVTE 710
            ++  ++  +ESE F     G   + F+DL   EQ S L  RL  Y +K YKR  D  +  
Sbjct: 729  EFKMVRNALESESFPPKWPGKPPRRFVDLAPTEQTSFLHKRLGDYSRKVYKRTHDTKIIN 788

Query: 711  LREAGICMRENSFYVDTVRSFRDRRYEYKGLNKVWKGKLSEAKASGNSIKIQEAQDMVVL 770
             +EA IC REN FY+DTVR FRDRRY YKGL+K WK  L  A  +G+   + EA+ M+VL
Sbjct: 789  -KEAIICQRENPFYIDTVREFRDRRYTYKGLHKTWKKNLDGASVTGSLTDVVEAKKMIVL 847

Query: 771  YDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELD 830
            YDSLQLAHKCILNSFYGYVMRKGARWYSMEMAG+   TGA IIQ AR L+E+IG+PLELD
Sbjct: 848  YDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGITCLTGASIIQMARRLVEQIGRPLELD 907

Query: 831  TDGIWCVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTY 890
            TDGIWC+LPGSFPE+F F+ K+  K  +ISYPC MLN  V    TNDQY  LVD     Y
Sbjct: 908  TDGIWCMLPGSFPEDFKFRLKN-GKSFSISYPCTMLNHRVHDGFTNDQYHELVDKERGVY 966

Query: 891  ETHSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKL 950
            E   E SI FE+DGPY+AMILP+SKEE  L+KKRYAVFN+DG+LAELKGFE+KRRGEL+L
Sbjct: 967  EIRKENSIFFELDGPYRAMILPSSKEEDKLLKKRYAVFNEDGSLAELKGFEVKRRGELQL 1026

Query: 951  IKVFQAELFDKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSK 1010
            IK FQ ++F++FL G T+++CY+AVA  A+++LD+L ++   ++D+ELID I+E+ +MSK
Sbjct: 1027 IKTFQTQIFERFLLGDTLKDCYAAVATSADQFLDILTSKAASLSDAELIDLIAENRSMSK 1086

Query: 1011 SLADYGEQKSCAVTTARRLSDFLGDTMVKDKGLRCQYIVACEPQGTPVSERAVPVAIFET 1070
            +LA+Y  QKS +++TA+RL++FLGD MVKDKGL C++IV+ +P G PV+ERAVPVAIF  
Sbjct: 1087 TLAEYAGQKSTSISTAKRLAEFLGDQMVKDKGLACKFIVSAKPNGAPVTERAVPVAIFTA 1146

Query: 1071 DAEIMKFYLRKWCKTSS--DVGIRSIVDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRV 1128
            +  + + +LRKW K +S     +R I+DW YY  RL S IQK++TIPAA+QK+ NPVPR+
Sbjct: 1147 EPSVRQHFLRKWLKDNSLTSFDLRDILDWDYYIDRLGSVIQKLVTIPAALQKIPNPVPRI 1206

Query: 1129 VHPDWLYKKVREKEDKFRQRKLVDIFSSLKKDDFLNKTCNAETNLMDENVEDLEDFPKKR 1188
             HPDWL ++V   +DK++Q ++ D+F   +           + +   + + D++ F    
Sbjct: 1207 RHPDWLARRVASIDDKYKQHRITDMFVKQR----------IQASAAGKALTDVKSF---- 1252

Query: 1189 RNSVNGPRPIVRCFEVNNEQKTVKTTDQVDSLRQQLEPSEVSDQQPSSQNAIDTENIDRI 1248
                +GP+ +        +QK                P+ V D+ P           D  
Sbjct: 1253 ----SGPKLV--------KQK----------------PAVVIDEGPLP---------DPR 1275

Query: 1249 VDYKGWLELKKRKWKDNLDRRKKQKLGSLRASHQANGVSESLGDMINHKEAQRRTGVGSY 1308
             +Y  W++  K +W+      K+Q++ +  ++   +  S  LG+M+              
Sbjct: 1276 SNYSAWIKRMKPRWQ-----LKRQQMAAAASAGGPSSHSR-LGNML-------------- 1315

Query: 1309 FRRQETAMTRCHWQIIQLVP--SSQSGVFLAWVVVEGIMVRIPITVPRLFYLNSKDPIVE 1366
             R+Q  A+    W+I+Q+    SS+ G    W++++  +  I + V R FYLN K+ I  
Sbjct: 1316 -RQQAGAIMTSDWEILQVTESGSSREGELKIWLLIKNNLQAIKLRVSREFYLNVKNLITA 1374

Query: 1367 K--FPGR----RVNKTLPHGRRSFNLIEVMIDEDQFRKESKKLAALLADPEVE 1413
               FP       V K LP  +R  NL++V +DE  F  E    A LL +PE++
Sbjct: 1375 APYFPASCRVADVVKGLPSSQRRQNLVKVTVDEGTFTSEQAAYARLLNNPEID 1427



 Score =  274 bits (700), Expect = 5e-70,   Method: Compositional matrix adjust.
 Identities = 177/626 (28%), Positives = 297/626 (47%), Gaps = 73/626 (11%)

Query: 1408 ADPEVEVLGWQQNAAKIGMQRCAASSQWFNERISLA---------------------RYA 1446
            AD  +  L WQ+ A+K  +Q     S W  +RI+LA                      YA
Sbjct: 1631 ADNVLPALAWQEPASKRMLQHYLRVSHWLKDRIALAEEFDIPLCNLEGDVPIMVADIEYA 1690

Query: 1447 H-------ILWISDDGVPDLGGTSEEDECFADEVHQPVLTYPGAYRKVSVELKIHHLSVN 1499
                    +LW S    PDLGG  E+    A E  +P ++ PG Y    V+L +  L+VN
Sbjct: 1691 RRLISADLLLWWSPRAKPDLGGRDEDTFVSASETSEPEISRPGCYTNAVVDLDLRDLAVN 1750

Query: 1500 ALLKSNQVNEMEG--GGLFGFDQ-----DMNSGPYNNELCGFDETTSSAPAFRVVKQLIQ 1552
            A++++  V E+EG  G   GF +     D  +    +E     +   S   F +++ +++
Sbjct: 1751 AVMQAAFVYELEGAEGTSMGFGEASHNLDEYAKGSAHEAVNLGDVVLSPQTFAILRSMVR 1810

Query: 1553 RCLTDAVTSGNVFADAILQ-HLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEFRKL 1611
            + L   V+SG      ++  H +RW+CSP S + DP   + LH VM KV + LLAE R+L
Sbjct: 1811 QWL---VSSGKDNQSGMMTDHFWRWVCSPSSNMFDPATLKFLHGVMCKVLSQLLAELRRL 1867

Query: 1612 GATIIFANFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLFMDQ 1671
            G+ +++A+F+++++ T K D   A AY + ++ ++  R+LF+ I LE   ++  L++ D 
Sbjct: 1868 GSEVVYADFTRIMLVTTKPDSFNALAYINYIVSSISGRDLFKSIHLEATTYYDLLIWYDA 1927

Query: 1672 YNYGGIPARADESLDDDSQVDIVSSWNIAEYLPKEIQDHFVLVVSEFMYIPWKHAQKLAA 1731
             N+ G+  +       +    +V  WNI  +LP  +Q HF   ++ + +  +   ++   
Sbjct: 1928 ANFAGVICKDPNVEMTEKDTTVVMGWNICSFLPPVLQPHFSTAIATYAHNIYSIKRQCTR 1987

Query: 1732 S-RASLQEGSSCTPSITVAAAENFESHIVQYVKGEISSYFTGKLLSIVRDAIHHMKKMNN 1790
              R  L+   +   ++  A      S   +Y    IS  FT ++L  + D         N
Sbjct: 1988 DLRTPLRMIQNAAETVPNAGKLEEASLTAKY----ISESFTRRMLKTLSDL--------N 2035

Query: 1791 DQHNSPGVMQTA-----------ANIHKVDAPLEFIKHVCAAFALDQNVQHDVLVMRKNL 1839
             QH     +  A           +++ +    L +I  VCA  +L +    +   +++ L
Sbjct: 2036 RQHTRDTAVPEARQLWEFPRLPGSHLQQRKPLLAWIASVCAIVSLHKTNAVEAQSLKRML 2095

Query: 1840 LKYVRVREFAPEAEFRDPCPSFILPNVICSYCNDCRDLDLCRDMALLAQ--------DWH 1891
            L+ + VREF+ EA FR+PC S  +   +C +C + R +DLCRD  LLA          W 
Sbjct: 2096 LQQIGVREFSAEAAFRNPCISIKVQMAVCLHCANARTMDLCRDPTLLASANATSDQLAWQ 2155

Query: 1892 CAMPQCGQPYDREVMENALLQIVRQRERLYHLQDLVCIRCNQVKAAHLAEQCACAGSFRC 1951
            C  P+CG P DR  +EN+L+  + +    Y L+DL C RCN +K   L++ C C+GSF  
Sbjct: 2156 C--PRCGHPQDRGAIENSLIDTLLRAVAEYQLRDLKCARCNTIKVRDLSKDCECSGSFSI 2213

Query: 1952 KEDASDFRSKMQIFLNIANRQGFQLL 1977
            +E      +++  F  +A     +LL
Sbjct: 2214 EEARKSILTRLHSFELVAQYYNLELL 2239


>gi|383863067|ref|XP_003707004.1| PREDICTED: DNA polymerase epsilon catalytic subunit A-like [Megachile
            rotundata]
          Length = 2268

 Score = 1325 bits (3430), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 683/1404 (48%), Positives = 943/1404 (67%), Gaps = 52/1404 (3%)

Query: 32   GYDLFSEGDKRLGWLLTFASSSLEDEDTRKVYSCIDLYFVSQDGSTFKSKYKFRPYFYAA 91
            G+   ++  +R+G+L+   ++ +  ED +++ S +D YF+ +D S FK  + + PYFY  
Sbjct: 52   GFHRVTDTKERIGFLINMHTTEI-IEDDKRLLSGVDYYFLEEDCSRFKISFPYCPYFYIL 110

Query: 92   TKEKMEMDVEAYLRRRYESQIADIEILEKEDLDLKNHLSGLHKSYLKISFDTVQQLMDVK 151
             K+    +V   L ++Y   I  +E + KEDLDL NHL GL + YLK+ F     L  VK
Sbjct: 111  CKKDTYEEVSTGLNKKYADLIHKVETIYKEDLDLPNHLIGLKQKYLKLYFLNTVDLNKVK 170

Query: 152  KDLLHVVERNQAKFDAAEAYESILTG---------KREQRPQDFLDCIVDLREYDVPYHI 202
            +D++  V+ N+ +      Y  +L+            +++  DF D I+D+RE+DVP+H+
Sbjct: 171  RDIIKAVKLNKDREKGHTYYSDMLSTVLNPDQNVVDYKKQTIDFKDNILDIREHDVPHHV 230

Query: 203  RFAIDNDVRCGQWYDVSISSTG-PLLEKRVDLLQRAEVHVCAFDIETTKLPLKFPDADYD 261
            R +ID  + CG WY V       P++ KR D+++  E  + A+DIETTKLPLKFPDA+ D
Sbjct: 231  RVSIDMKIFCGSWYSVRTRDRDVPIITKRDDIIEPIEPIILAYDIETTKLPLKFPDANMD 290

Query: 262  IIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNVNNEIELLRLWFAHM 321
             IMMISYM+DGQGYLI NRE +  DIED EYTPKPEFEG+FK+ N  NE   ++ +F H+
Sbjct: 291  QIMMISYMIDGQGYLITNREIISCDIEDFEYTPKPEFEGFFKIFNEPNEKATIKRFFDHI 350

Query: 322  QEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDKNQGECRAKFACHLDCFAW 381
             +++P I+VTYNGD+FDWPF+ETRAA H   M + +GF  +++ G    + A H+DC +W
Sbjct: 351  NDIRPHIFVTYNGDFFDWPFVETRAAFHNMDMKDRIGFSKNRD-GVYTCRPAMHMDCLSW 409

Query: 382  VKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQMMASYSVSDAVATYYLY 441
            V+RDSYLP GSQ LKAV KAKL YDP+E++PEDM + A E+P+ +A+YSVSDAVATYYLY
Sbjct: 410  VRRDSYLPVGSQNLKAVAKAKLRYDPVELDPEDMCKLASEEPETLANYSVSDAVATYYLY 469

Query: 442  MTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVICPNKHQSDPEKFYRN 501
              YVHPFIF+L TIIPM PDEVLRKGSGTLCE LLMVQAY+AN+I PNK +++  K  ++
Sbjct: 470  HKYVHPFIFALCTIIPMEPDEVLRKGSGTLCESLLMVQAYQANIIFPNKQEAEFSKLTKD 529

Query: 502  -HLLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQLLNNLDRDLQYAIKVEGKMDL 560
             HLL+ ETY+GGHVE LESGVFR+D+P  FK+ PSA ++LLN +   L+YAI+ E K+ +
Sbjct: 530  GHLLDQETYVGGHVEALESGVFRADIPCRFKIIPSAIDELLNGVRSALKYAIEEEEKVPI 589

Query: 561  ESVSNYDEVKNAIMEKLLRLQEEPIREECPLIYHLDVAAMYPNIILTNRLQPPSIVTDEV 620
            + V+N+DEV   I  KL  L+++P+R E P+IYHLDV AMYPNIILTNRLQP ++V + V
Sbjct: 590  DMVTNFDEVVEEIKGKLQALRDQPLRLENPVIYHLDVGAMYPNIILTNRLQPSAMVDETV 649

Query: 621  CTACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYYHLKKQIESE-FVDGTNGHLSKSFLDL 679
            C ACDFN+PG  C R ++W+WRGE      S+Y  +++Q+E+E F     G   +++ +L
Sbjct: 650  CAACDFNKPGALCQRNMQWMWRGEYLAASLSEYQRIQQQLENEKFPPQFPGGPRRAYHEL 709

Query: 680  PKMEQQSRLKDRLKKYCQKAYKRVLDKPVTELREAGICMRENSFYVDTVRSFRDRRYEYK 739
             + EQ S  K RL +YC+KAYK+V    + E R   IC +ENSFYVDTVR+FRDRRYEYK
Sbjct: 710  SREEQASYEKKRLTEYCKKAYKKVKVTRMEE-RTQTICQKENSFYVDTVRAFRDRRYEYK 768

Query: 740  GLNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHKCILNSFYGYVMRKGARWYSM 799
             L KV K +++ A A G++  I+ A++  VLYDSLQLAHKCILNSFYGYVMRKG+RW+SM
Sbjct: 769  ALTKVAKQQVAAALAKGDAGDIKSAKNREVLYDSLQLAHKCILNSFYGYVMRKGSRWFSM 828

Query: 800  EMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLPGSFPENFTFKTKDLKK-KLT 858
            EM G+V YTGA II  AR +IEK+G+PLELDTDGIWCVLP SFP+N    T   KK K+ 
Sbjct: 829  EMGGIVCYTGAHIIMKAREIIEKVGRPLELDTDGIWCVLPASFPDNVIIHTTHEKKSKIV 888

Query: 859  ISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEFEVDGPYKAMILPASKEEG 918
            ISYP  +LN  V    TND Y  LVD  + TY+  SE SI FEVDGPY AM+LPA+KEEG
Sbjct: 889  ISYPNAILNFMVKDQFTNDVYHELVDSENLTYKIRSENSIFFEVDGPYLAMVLPAAKEEG 948

Query: 919  ILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFLHGSTIEECYSAVAAV 978
              +KKRYAVFN DG+LAELKGFE+KRRGEL+LIK+FQ  +F+ FL G+T+EECY++VA  
Sbjct: 949  KKLKKRYAVFNFDGSLAELKGFEVKRRGELQLIKIFQTSVFESFLKGNTLEECYASVAKD 1008

Query: 979  ANRWLDLLDNQGKDIADSELIDYISESSTMSKSLADYGEQKSCAVTTARRLSDFLGDTMV 1038
            A+ WLD+L ++ ++I DSEL + ISE+ +MS+ L DYG QKS +++TA+RL++FLGD MV
Sbjct: 1009 ADYWLDILYSKCENIPDSELFELISENKSMSRKLEDYGAQKSTSISTAKRLAEFLGDQMV 1068

Query: 1039 KDKGLRCQYIVACEPQGTPVSERAVPVAIFETDAEIMKFYLRKWCK---TSSDVGIRSIV 1095
            KD GL C+YI+A +PQG PV+ERA+P+AIF+++  I ++YLRKW K     SD  IR I+
Sbjct: 1069 KDAGLACKYIIANKPQGAPVTERAIPLAIFQSEPAIKRYYLRKWLKDPGLQSD-DIRQIL 1127

Query: 1096 DWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLYKKVREKEDKFRQRKLVDIFS 1155
            DW YY +RL S IQKIITIPAAMQ + NPVPRV HPDWL+K+V EK    +Q+K+ D+F+
Sbjct: 1128 DWGYYIERLGSTIQKIITIPAAMQGLPNPVPRVKHPDWLHKRVMEKGATHKQKKITDLFA 1187

Query: 1156 SLKKDDFLNKTCNAETNLMDE-NVEDLEDFPKKRRNSVNGPRPIVRCFEVNNEQKTVKTT 1214
            ++ K      T N  T + D  +  D+ED  +  +     P PI     VN +++     
Sbjct: 1188 TVPKS-----TENDNTQVTDSCDTPDIEDIAEAAQ-PFKKPMPI-----VNQKKRKHSEE 1236

Query: 1215 DQVDSLRQQLEPSEVSDQQPSSQNAIDTENIDRIVDYKGWLELKKRKWKDNLDRRKKQKL 1274
            D++D+ +      +V    P     I T   +++     WLE  K+KW     +R + ++
Sbjct: 1237 DKIDNNKSW---KDVLGSPP----PIGTTKEEKL----KWLEFHKQKWAYQAKQRAEHRI 1285

Query: 1275 GSLRASHQANGVSESLGDMINHKEAQRRTGVGSYFRRQETAMTRCHWQIIQLVPSSQSGV 1334
                 +   N    S G           + +G + R  +  +    WQIIQ+  +++ G+
Sbjct: 1286 SKRCKTTTDNREQSSWGIT----RTINTSTLGGFLRHAQKKLLISPWQIIQISATNEPGL 1341

Query: 1335 FLAWVVVEGIMVRIPITVPRLFYLNSKDPIVEKFPGRRV-----NKTLPHGRRSFNLIEV 1389
            +  WV+VE  + ++ + +PR+FY+N++ P  +  PG++V     +K LP  R  FNL   
Sbjct: 1342 YRLWVLVERELHQLRLIIPRIFYVNTRKPKPDPEPGKKVSWTKSSKILPRSRPVFNLYRY 1401

Query: 1390 MIDEDQFRKESKKLAALLADPEVE 1413
             + E  ++  S++L   L+ PE+E
Sbjct: 1402 SVPESLYQMHSQELLEDLSKPEIE 1425



 Score =  294 bits (753), Expect = 3e-76,   Method: Compositional matrix adjust.
 Identities = 168/547 (30%), Positives = 287/547 (52%), Gaps = 40/547 (7%)

Query: 1442 LARYAHILWISDDGVPDLGGTSEEDECFA---DEVHQPVLTYPGAYRKVSVELKIHHLSV 1498
            L +   +LW S    PDLGG+  +D       +E        PG Y    +EL+I +L+V
Sbjct: 1683 LQKSNFVLWCSSTEKPDLGGSENDDNRLLTDFEESSHCAANNPGTYSSDCIELEIENLAV 1742

Query: 1499 NALLKSNQVNEMEGGGLF-GFD-------QDMNSGPYN-NELCGFDETTSSAPAFRVVKQ 1549
            N LL+ + +++++G   F GF        QDM +G      +  +DET    PAFR ++ 
Sbjct: 1743 NTLLQYHHIHDIDGTSSFVGFHNQQQTSIQDMATGDSALTAIPSYDETALCNPAFRALRS 1802

Query: 1550 LIQRCLTDAVTSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEFR 1609
            ++   L D     NVFAD  + H YRWL SP++ L+DP L R LH  M+K+F  LLAEF+
Sbjct: 1803 MVNTWLLDVSVYKNVFADYQIIHFYRWLRSPNALLYDPALRRTLHTYMKKLFIQLLAEFK 1862

Query: 1610 KLGATIIFANFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLFM 1669
             LG+ II+ANF+K+I+ T K  ++ A  Y + +++ ++ +E+F  IE+     W  L+++
Sbjct: 1863 TLGSIIIYANFNKMIVCTKKRAVNDALGYIEFVVQTIRNKEIFHGIEITFEQCWEYLIWL 1922

Query: 1670 DQYNYGGIPARADESLDDDSQ-----------------VDIVSSWNIAEYLPKEI--QDH 1710
            D YNYGG+  +  +S+ D+ +                  +IV  WN+ E LPKE   Q  
Sbjct: 1923 DVYNYGGVRGKLPKSVKDNVEDTDINEYEEEEDEDEHSPEIVMQWNLMECLPKEAACQSS 1982

Query: 1711 FVLVVSEFMYIPWKHA---QKLAASRASLQEGSSCTPSITVAAAENFESHIVQYVKGEIS 1767
            F  +++ ++   +++    +++  S    +  +S + S+T         +   + K  IS
Sbjct: 1983 FSAIIAGYINAIYQYISENEQMNTSIKPRRRSNSLSQSLTAQLGLGSLENTADFAKKLIS 2042

Query: 1768 SYFTGKLLSIVRDAIHHMKKMNNDQHNSPGVMQTAANIHKVDAPLEFIKHVCAAFALDQN 1827
               + +L  I++     + +        P +        +++  LE IK VC   +LD+ 
Sbjct: 2043 GDLSQQLFQIIQKIHKKIPEKVLTIEEYPNLDLDGKETKRINPALELIKSVCKVLSLDKE 2102

Query: 1828 VQHDVLVMRKNLLKYVRVREFAPEAEFRDPCPSFILPNVICSYCNDCRDLDLCRD-MALL 1886
            ++++V  ++KN+L+ +++  F+   E++DPC S ILP +IC  CN  RD+DLC+D + ++
Sbjct: 2103 IENEVYSLQKNMLRLIKIGSFSDVVEWKDPCISLILPEIICKACNHTRDIDLCKDNLCVM 2162

Query: 1887 AQD---WHCAMPQCGQPYDREVMENALLQIVRQRERLYHLQDLVCIRCNQVKAAHLAEQC 1943
              D   W C  P C   YD E +E  L+ +  ++   Y LQDL C +C ++K  ++ E C
Sbjct: 2163 ENDKYMWKC--PLCKTNYDNEEIEFLLIDMSNRKSMGYILQDLQCRKCKEIKRENMNELC 2220

Query: 1944 ACAGSFR 1950
            +C+G F+
Sbjct: 2221 SCSGEFK 2227


>gi|349580686|dbj|GAA25845.1| K7_Pol2p [Saccharomyces cerevisiae Kyokai no. 7]
          Length = 2222

 Score = 1325 bits (3429), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 689/1412 (48%), Positives = 920/1412 (65%), Gaps = 104/1412 (7%)

Query: 42   RLGWLLTFASSSLEDED------------------TRKVYSCIDLYFVSQDGSTFKSKYK 83
            R+GWL    ++ +  E                   T +  S +D YF+ ++G +FKS   
Sbjct: 75   RVGWLTNMHATLVSQETLSSGSNGGGNSNDGERVTTNQGVSGVDFYFLDEEGGSFKSTVV 134

Query: 84   FRPYFYAATKEKMEM-DVEAYLRRRYESQIADIEILEKEDLDLKNHLSGLHKSYLKISFD 142
            + PYF+ A  ++  + DVE  +++  ES +  ++I+ KEDL + NHL GL K+ +K+SF 
Sbjct: 135  YDPYFFIACNDESRVNDVEELVKKYLESCLKSLQIIRKEDLTMDNHLLGLQKTLIKLSFV 194

Query: 143  TVQQLMDVKKDLLHVVERNQAKFDAAEAYESILTGKREQRPQDFLDCIVDLREYDVPYHI 202
               QL + +K L  +++ N         Y     G  +    D    I D+REYDVPYH+
Sbjct: 195  NSNQLFEARKLLRPILQDNANNNVQRNIYNVAANGSEKV---DAKHLIEDIREYDVPYHV 251

Query: 203  RFAIDNDVRCGQWYDVSISSTGPLLEKRVDLLQRAEVHVCAFDIETTKLPLKFPDADYDI 262
            R +ID D+R G+WY V+    G + + R   +  A+  V AFDIETTK PLKFPD+  D 
Sbjct: 252  RVSIDKDIRVGKWYKVT--QQGFIEDTRK--IAFADPVVMAFDIETTKPPLKFPDSAVDQ 307

Query: 263  IMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNVNNEIELLRLWFAHMQ 322
            IMMISYM+DG+G+LI NRE + EDIED EYTPKPE+ G+F + N N+E+ LL+ +F H++
Sbjct: 308  IMMISYMIDGEGFLITNREIISEDIEDFEYTPKPEYPGFFTIFNENDEVALLQRFFEHIR 367

Query: 323  EVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDKNQGECRAKFACHLDCFAWV 382
            +V+P +  T+NGD+FDWPF+  R+  HG  M +E+GF  D  +GE ++ +  H+DCF WV
Sbjct: 368  DVRPTVISTFNGDFFDWPFIHNRSKIHGLDMFDEIGFAPDA-EGEYKSSYCSHMDCFRWV 426

Query: 383  KRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQMMASYSVSDAVATYYLYM 442
            KRDSYLPQGSQGLKAVT++KLGY+P+E++PE M  +A EKPQ ++ YSVSDAVATYYLYM
Sbjct: 427  KRDSYLPQGSQGLKAVTQSKLGYNPIELDPELMTPYAFEKPQHLSEYSVSDAVATYYLYM 486

Query: 443  TYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVICPNKHQSDPEKFYRNH 502
             YVHPFIFSL TIIP++PDE LRKG+GTLCEMLLMVQAY+ N++ PNKH    E+FY  H
Sbjct: 487  KYVHPFIFSLCTIIPLNPDETLRKGTGTLCEMLLMVQAYQHNILLPNKHTDPIERFYDGH 546

Query: 503  LLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQLLNNLDRDLQYAIKVEGKMDLES 562
            LLESETY+GGHVE LE+GVFRSDL   FK+DPSA ++LL  L   L+++++VE K  ++ 
Sbjct: 547  LLESETYVGGHVESLEAGVFRSDLKNEFKIDPSAIDELLQELPEALKFSVEVENKSSVDK 606

Query: 563  VSNYDEVKNAIMEKLLRLQEEPIREECPLIYHLDVAAMYPNIILTNRLQPPSIVTDEVCT 622
            V+N++E+KN I +KLL L+E  IR E PLIYH+DVA+MYPNI+ TNRLQP SI T+  C 
Sbjct: 607  VTNFEEIKNQITQKLLELKENNIRNELPLIYHVDVASMYPNIMTTNRLQPDSIKTERDCA 666

Query: 623  ACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYYHLKKQIESEFVDGTNGHLSK---SFLDL 679
            +CDFNRPGKTC RKL+W WRGE F  K  +Y  +K+ +++E     N    K   +F +L
Sbjct: 667  SCDFNRPGKTCARKLKWAWRGEFFPSKMDEYNMIKRALQNETFPNKNKFSKKKVLTFDEL 726

Query: 680  PKMEQQSRLKDRLKKYCQKAYKRVLDKPVTELREAGICMRENSFYVDTVRSFRDRRYEYK 739
               +Q   +K RL +Y +K Y RV    + E REA +C REN FYVDTV+SFRDRRYE+K
Sbjct: 727  SYADQVIHIKKRLTEYSRKVYHRVKVSEIVE-REAIVCQRENPFYVDTVKSFRDRRYEFK 785

Query: 740  GLNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHKCILNSFYGYVMRKGARWYSM 799
            GL K WKG LS+   S    +  EA+ M+VLYDSLQLAHK ILNSFYGYVMRKG+RWYSM
Sbjct: 786  GLAKTWKGNLSKIDPSDKHAR-DEAKKMIVLYDSLQLAHKVILNSFYGYVMRKGSRWYSM 844

Query: 800  EMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLPGSFPENFTFKTKDLKKKLTI 859
            EMAG+   TGA IIQ AR L+E++G+PLELDTDGIWC+LP SFPE + F T +  KKL +
Sbjct: 845  EMAGITCLTGATIIQMARALVERVGRPLELDTDGIWCILPKSFPETYFF-TLENGKKLYL 903

Query: 860  SYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEFEVDGPYKAMILPASKEEGI 919
            SYPC MLN  V +  TN QYQ L DP++  YETHSE +I FEVDGPYKAMILP+SKEEG 
Sbjct: 904  SYPCSMLNYRVHQKFTNHQYQELKDPLNYIYETHSENTIFFEVDGPYKAMILPSSKEEGK 963

Query: 920  LIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFLHGSTIEECYSAVAAVA 979
             IKKRYAVFN+DG+LAELKGFE+KRRGEL+LIK FQ+++F  FL G T+E CYSAVA+V 
Sbjct: 964  GIKKRYAVFNEDGSLAELKGFELKRRGELQLIKNFQSDIFKVFLEGDTLEGCYSAVASVC 1023

Query: 980  NRWLDLLDNQGKDIADSELIDYISESSTMSKSLADYGEQKSCAVTTARRLSDFLGDTMVK 1039
            NRWLD+LD+ G  + D +L+  I E+ +MSK+L +Y  QKS ++TTARRL DFLG+ MVK
Sbjct: 1024 NRWLDVLDSHGLMLEDEDLVSLICENRSMSKTLKEYEGQKSTSITTARRLGDFLGEDMVK 1083

Query: 1040 DKGLRCQYIVACEPQGTPVSERAVPVAIFETDAEIMKFYLRKWCKTSS--DVGIRSIVDW 1097
            DKGL+C+YI++ +P   PV+ERA+PVAIF  D  I + +LR+W    S  D+ IR+I+DW
Sbjct: 1084 DKGLQCKYIISSKPFNAPVTERAIPVAIFSADIPIKRSFLRRWTLDPSLEDLDIRTIIDW 1143

Query: 1098 SYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLYKKVREKEDKFRQRKLVDIFSSL 1157
             YY++RL SAIQKIITIPAA+Q VSNPVPRV HPDWL +K+  KEDKF+Q  L   FS  
Sbjct: 1144 GYYRERLGSAIQKIITIPAALQGVSNPVPRVEHPDWLKRKIATKEDKFKQTSLTKFFS-- 1201

Query: 1158 KKDDFLNKTCNAETNLMDENVEDLEDFPKKRRNSVNGPRPIVRCFEVNNEQKTVKTTDQ- 1216
                   KT N  T    +++EDL +             P V   E N + K  +TT + 
Sbjct: 1202 -------KTKNVPTMGKIKDIEDLFE-------------PTVE--EDNAKIKVARTTKKK 1239

Query: 1217 --VDSLRQQLEPSEVSDQQPSSQNAIDTENIDRIVDYKGWLELKKRKWK-DNLDRRKKQK 1273
                  R QL   E     PS   ++D        DY GWL  +K KWK    DR+++ +
Sbjct: 1240 AVSKRKRNQLTNEEDPLVLPSEIPSMDE-------DYVGWLNYQKIKWKIQARDRKRRDQ 1292

Query: 1274 LGSLRASHQANGVSESLGDMINHKEAQRRTGVGSYFRRQETAMTRCHWQIIQLVPSSQSG 1333
            L                    N   ++ R+ +GS  R+Q  +     W+++Q   SS+ G
Sbjct: 1293 LFG------------------NTNSSRERSALGSMIRKQAESYANSTWEVLQYKDSSEPG 1334

Query: 1334 VFLAWVVVEGIMVRIPITVPRLFYLNSKDPIVEKFPGRRV--------NKTLPHGRRSFN 1385
            V   +V + G +  I   +P+  Y+  K    +  P +++        + +LP+  ++ N
Sbjct: 1335 VLEVFVTINGKVQNITFHIPKTIYMKFKS---QTMPLQKIKNCLIEKSSASLPNNPKTSN 1391

Query: 1386 -----LIEVMIDEDQFRKESKKLAALLADPEV 1412
                 L ++ + E  F +E +   ++  D  V
Sbjct: 1392 PTVGQLFKITLPESVFLEEKENCTSIFNDENV 1423



 Score =  214 bits (546), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 149/605 (24%), Positives = 278/605 (45%), Gaps = 48/605 (7%)

Query: 1415 LGWQQNAAKIGMQRCAASSQWFNERISLARYAHI-------------------------- 1448
            L WQ    K  +    +S  W +  I L++Y++I                          
Sbjct: 1625 LNWQPTLLKKLVNHVLSSGSWISHLIKLSQYSNIPICNLRLDSMDYVIDVLYARKLKKEN 1684

Query: 1449 --LWISDDG-VPDLGGTSEEDEC----FADEVHQPVLTYPGAYRKVSVELKIHHLSVNAL 1501
              LW ++   +PD GG   + +       ++   P +   G Y  V +++ + +L+VN +
Sbjct: 1685 IVLWWNEKAPLPDHGGIQNDFDLNTSWIMNDSEFPKINNSGVYDNVVLDVGVDNLTVNTI 1744

Query: 1502 LKSNQVNEMEGGGLFGFDQDMN-SGPYNNELCGFDETTSSAPAFRVVKQLIQRCLTDAVT 1560
            L S  +N+ EG  L   +  ++      N    F     S  A  V++ +++    +A+ 
Sbjct: 1745 LTSALINDAEGSDLVNNNMGIDDKDAVINSPSEFVHDAFSNDALNVLRGMLKEWWDEALK 1804

Query: 1561 SGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEFRKLGATIIFANF 1620
              N  AD ++  L  W+ +P++KL D +L   +H + +K    L+ EF  LG+TI++A+ 
Sbjct: 1805 E-NATADLLVNSLASWVQNPNAKLFDGLLRYHVHNLTKKALLQLVNEFSALGSTIVYADR 1863

Query: 1621 SKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLFMDQYNYGGIPAR 1680
            ++++I T K+      AY   ++KA++T  +F +++L    +W  L++MD++N+ G+   
Sbjct: 1864 NQILIKTNKYSPENCYAYSQYMMKAVRTNPMFSYLDLNIKRYWDLLIWMDKFNFSGLACI 1923

Query: 1681 ADESLDDDSQVDIVSSWNIAEYLPKEIQDHFVLVVSEFMYIPWKHAQKLAASRASLQEGS 1740
              E   ++      S W + ++L    Q  F     ++M I      K   S   L  G+
Sbjct: 1924 EIEE-KENQDYTAFSQWQLKKFLSPIYQPEF----EDWMMIILDSMLKTKQSYLKLNSGT 1978

Query: 1741 SCTPSITVAAAENFESHIVQYVKGEISSYFTGKLLSIVRDAIHHMKKMNND-QHNSPGVM 1799
                 I     ++ E  +   + G  S  F+  L+  V+    + ++   D Q+ +  V+
Sbjct: 1979 QRPTQIVNVKKQDEEDSVENSLNG-FSHLFSKPLMKRVKKLFKNQQEFILDPQYEADYVI 2037

Query: 1800 QTAANIH-KVDAP-LEFIKHVCAAFALDQNVQHDVLVMRKNLLKYVRVREFAPEAEFRDP 1857
                  H  V  P LE +K +C    L ++   ++  +RK LLK   +REFA  AEF+DP
Sbjct: 2038 PVLPGSHLNVKNPLLELVKSLCHVMLLSKSTILEIRTLRKELLKIFELREFAKVAEFKDP 2097

Query: 1858 CPSFILPNVICSYCNDCRDLDLCRDMALLAQDWHCAMPQCGQPYDREVMENALLQIVRQR 1917
              S ++P+ +C YC    D+D C+  A     + C   +C + +++ +++  L+Q +R  
Sbjct: 2098 SLSLVVPDFLCEYCFFISDIDFCK--AAPESIFSCV--RCHKAFNQVLLQEHLIQKLRSD 2153

Query: 1918 ERLYHLQDLVCIRCNQVKAAHLAEQCACAGSFRCKEDASDFRSKMQIFLNIANRQGFQLL 1977
               Y +QDL C RC++VK  +++  C CAG++           K+ +F  +A   GF +L
Sbjct: 2154 IESYLIQDLRCSRCHKVKRDYMSAHCPCAGAWEGTLPRESIVQKLNVFKQVAKYYGFDIL 2213

Query: 1978 QECTS 1982
              C +
Sbjct: 2214 LSCIA 2218


>gi|256272386|gb|EEU07369.1| Pol2p [Saccharomyces cerevisiae JAY291]
          Length = 2222

 Score = 1324 bits (3427), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 684/1409 (48%), Positives = 913/1409 (64%), Gaps = 98/1409 (6%)

Query: 42   RLGWLLTFASSSLEDED------------------TRKVYSCIDLYFVSQDGSTFKSKYK 83
            R+GWL    ++ +  E                   T +  S +D YF+ ++G +FKS   
Sbjct: 75   RVGWLTNMHATLVSQETLSSGSNGGGNSNDGERVTTNQGVSGVDFYFLDEEGGSFKSTVV 134

Query: 84   FRPYFYAATKEKMEM-DVEAYLRRRYESQIADIEILEKEDLDLKNHLSGLHKSYLKISFD 142
            + PYF+ A  ++  + DVE  +++  ES +  ++I+ KEDL + NHL GL K+ +K+SF 
Sbjct: 135  YDPYFFIACNDESRVNDVEELVKKYLESCLKSLQIIRKEDLTMDNHLLGLQKTLIKLSFV 194

Query: 143  TVQQLMDVKKDLLHVVERNQAKFDAAEAYESILTGKREQRPQDFLDCIVDLREYDVPYHI 202
               QL + +K L  +++ N         Y     G  +    D    I D+REYDVPYH+
Sbjct: 195  NSNQLFEARKLLRPILQDNANNNVQRNIYNVAANGSEKV---DAKHLIEDIREYDVPYHV 251

Query: 203  RFAIDNDVRCGQWYDVSISSTGPLLEKRVDLLQRAEVHVCAFDIETTKLPLKFPDADYDI 262
            R +ID D+R G+WY V+    G + + R   +  A+  V AFDIETTK PLKFPD+  D 
Sbjct: 252  RVSIDKDIRVGKWYKVT--QQGFIEDTRK--IAFADPVVMAFDIETTKPPLKFPDSAVDQ 307

Query: 263  IMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNVNNEIELLRLWFAHMQ 322
            IMMISYM+DG+G+LI NRE + EDIED EYTPKPE+ G+F + N N+E+ LL+ +F H++
Sbjct: 308  IMMISYMIDGEGFLITNREIISEDIEDFEYTPKPEYPGFFTIFNENDEVALLQRFFEHIR 367

Query: 323  EVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDKNQGECRAKFACHLDCFAWV 382
            +V+P +  T+NGD+FDWPF+  R+  HG  M +E+GF  D  +GE ++ +  H+DCF WV
Sbjct: 368  DVRPTVISTFNGDFFDWPFIHNRSKIHGLDMFDEIGFAPDA-EGEYKSSYCSHMDCFRWV 426

Query: 383  KRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQMMASYSVSDAVATYYLYM 442
            KRDSYLPQGSQGLKAVT++KLGY+P+E++PE M  +A EKPQ ++ YSVSDAVATYYLYM
Sbjct: 427  KRDSYLPQGSQGLKAVTQSKLGYNPIELDPELMTPYAFEKPQHLSEYSVSDAVATYYLYM 486

Query: 443  TYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVICPNKHQSDPEKFYRNH 502
             YVHPFIFSL TIIP++PDE LRKG+GTLCEMLLMVQAY+ N++ PNKH    E+FY  H
Sbjct: 487  KYVHPFIFSLCTIIPLNPDETLRKGTGTLCEMLLMVQAYQHNILLPNKHTDPIERFYDGH 546

Query: 503  LLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQLLNNLDRDLQYAIKVEGKMDLES 562
            LLESETY+GGHVE LE+GVFRSDL   FK+DPSA ++LL  L   L+++++VE K  ++ 
Sbjct: 547  LLESETYVGGHVESLEAGVFRSDLKNEFKIDPSAIDELLQELPEALKFSVEVENKSSVDK 606

Query: 563  VSNYDEVKNAIMEKLLRLQEEPIREECPLIYHLDVAAMYPNIILTNRLQPPSIVTDEVCT 622
            V+N++E+KN I +KLL L+E  IR E PLIYH+DVA+MYPNI+ TNRLQP SI T+  C 
Sbjct: 607  VTNFEEIKNQITQKLLELKENNIRNELPLIYHVDVASMYPNIMTTNRLQPDSIKTERDCA 666

Query: 623  ACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYYHLKKQIESEFVDGTNGHLSK---SFLDL 679
            +CDFNRPGKTC RKL+W WRGE F  K  +Y  +K+ +++E     N    K   +F +L
Sbjct: 667  SCDFNRPGKTCARKLKWAWRGEFFPSKMDEYNMIKRALQNETFPNKNKFSKKKALTFDEL 726

Query: 680  PKMEQQSRLKDRLKKYCQKAYKRVLDKPVTELREAGICMRENSFYVDTVRSFRDRRYEYK 739
               +Q   +K RL +Y +K Y RV    + E REA +C REN FYVDTV+SFRDRRYE+K
Sbjct: 727  SYADQVIHIKKRLTEYSRKVYHRVKVSEIVE-REAIVCQRENPFYVDTVKSFRDRRYEFK 785

Query: 740  GLNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHKCILNSFYGYVMRKGARWYSM 799
            GL K WKG LS+   S    +  EA+ M+VLYDSLQLAHK ILNSFYGYVMRKG+RWYSM
Sbjct: 786  GLAKTWKGNLSKIDPSDKHAR-DEAKKMIVLYDSLQLAHKVILNSFYGYVMRKGSRWYSM 844

Query: 800  EMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLPGSFPENFTFKTKDLKKKLTI 859
            EMAG+   TGA IIQ AR L+E++G+PLELDTDGIWC+LP SFPE + F T +  KKL +
Sbjct: 845  EMAGITCLTGATIIQMARALVERVGRPLELDTDGIWCILPKSFPETYFF-TLENGKKLYL 903

Query: 860  SYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEFEVDGPYKAMILPASKEEGI 919
            SYPC MLN  V +  TN QYQ L DP++  YETHSE +I FEVDGPYKAMILP+SKEEG 
Sbjct: 904  SYPCSMLNYRVHQKFTNHQYQELKDPLNYIYETHSENTIFFEVDGPYKAMILPSSKEEGK 963

Query: 920  LIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFLHGSTIEECYSAVAAVA 979
             IKKRYAVFN+DG+LAELKGFE+KRRGEL+LIK FQ+++F  FL G T+E CYSAVA+V 
Sbjct: 964  GIKKRYAVFNEDGSLAELKGFELKRRGELQLIKNFQSDIFKVFLEGDTLEGCYSAVASVC 1023

Query: 980  NRWLDLLDNQGKDIADSELIDYISESSTMSKSLADYGEQKSCAVTTARRLSDFLGDTMVK 1039
            NRWLD+LD+ G  + D +L+  I E+ +MSK+L +Y  QKS ++TTARRL DFLG+ MVK
Sbjct: 1024 NRWLDVLDSHGLMLEDEDLVSLICENRSMSKTLKEYEGQKSTSITTARRLGDFLGEDMVK 1083

Query: 1040 DKGLRCQYIVACEPQGTPVSERAVPVAIFETDAEIMKFYLRKWCKTSS--DVGIRSIVDW 1097
            DKGL+C+YI++ +P   PV+ERA+PVAIF  D  I + +LR+W    S  D+ IR+I+DW
Sbjct: 1084 DKGLQCKYIISSKPFNAPVTERAIPVAIFSADIPIKRSFLRRWTLDPSLEDLDIRTIIDW 1143

Query: 1098 SYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLYKKVREKEDKFRQRKLVDIFSSL 1157
             YY++RL SAIQKIITIPAA+Q VSNPVPRV HPDWL +K+  KEDKF+Q  L   FS  
Sbjct: 1144 GYYRERLGSAIQKIITIPAALQGVSNPVPRVEHPDWLKRKIATKEDKFKQTSLTKFFSKT 1203

Query: 1158 KKDDFLNKTCNAETNLMDENVEDLEDFPKKRRNSVNGPRPIVRCFEVNNEQKTVKTTDQV 1217
            K    + K            ++D+ED  +      N    I R         T K     
Sbjct: 1204 KNVPTMGK------------IKDIEDLFEPTVEEDNAKIKIAR---------TTKKKAVS 1242

Query: 1218 DSLRQQLEPSEVSDQQPSSQNAIDTENIDRIVDYKGWLELKKRKWK-DNLDRRKKQKLGS 1276
               R QL   E     PS   ++D        DY GWL  +K KWK    DR+++ +L  
Sbjct: 1243 KRKRNQLTNEEDPLVLPSEIPSMDE-------DYVGWLNYQKIKWKIQARDRKRRDQLFG 1295

Query: 1277 LRASHQANGVSESLGDMINHKEAQRRTGVGSYFRRQETAMTRCHWQIIQLVPSSQSGVFL 1336
                              N   ++ R+ +GS  R+Q  +     W+++Q   S + GV  
Sbjct: 1296 ------------------NTNSSRERSALGSMIRKQAESYANSTWEVLQYKDSGEPGVLE 1337

Query: 1337 AWVVVEGIMVRIPITVPRLFYLNSKDPIVEKFPGRRV--------NKTLPHGRRSFN--- 1385
             +V + G +  I   +P+  Y+  K    +  P +++        + +LP+  ++ N   
Sbjct: 1338 VFVTINGKVQNITFHIPKTIYMKFKS---QTMPLQKIKNCLIEKSSASLPNNPKTSNPAG 1394

Query: 1386 --LIEVMIDEDQFRKESKKLAALLADPEV 1412
              L ++ + E  F +E +   ++  D  V
Sbjct: 1395 GQLFKITLPESVFLEEKENCTSIFNDENV 1423



 Score =  216 bits (550), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 150/605 (24%), Positives = 279/605 (46%), Gaps = 48/605 (7%)

Query: 1415 LGWQQNAAKIGMQRCAASSQWFNERISLARYAHI-------------------------- 1448
            L WQ    K  +    +S  W +  I L++Y++I                          
Sbjct: 1625 LNWQPTLLKKLVNHVLSSGSWISHLIKLSQYSNIPICNLRLDSMDYVIDVLYARKLKKEN 1684

Query: 1449 --LWISDDG-VPDLGGTSEEDEC----FADEVHQPVLTYPGAYRKVSVELKIHHLSVNAL 1501
              LW ++   +PD GG   + +       ++   P +   G Y  V +++ + +L+VN +
Sbjct: 1685 IVLWWNEKAPLPDHGGIQNDFDLNTSWIMNDSEFPKINNSGVYDNVVLDVGVDNLTVNTI 1744

Query: 1502 LKSNQVNEMEGGGLFGFDQDMN-SGPYNNELCGFDETTSSAPAFRVVKQLIQRCLTDAVT 1560
            L S  +N+ EG  L   +  ++      N    F     S  A  V++ +++    +A+ 
Sbjct: 1745 LTSALINDAEGSDLVNNNMGIDDKDAVINSPSEFVHDAFSNDALNVLRGMLKEWWDEALK 1804

Query: 1561 SGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEFRKLGATIIFANF 1620
              N  AD ++  L  W+ +P++KL D +L   +H + +K    L+ EF  LG+TI++A+ 
Sbjct: 1805 E-NSTADLLVNSLASWVQNPNAKLFDGLLRYHVHNLTKKALLQLVNEFSALGSTIVYADR 1863

Query: 1621 SKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLFMDQYNYGGIPAR 1680
            ++++I T K+      AY   ++KA++T  +F +++L    +W  L++MD++N+ G+   
Sbjct: 1864 NQILIKTNKYSPENCYAYSQYMMKAVRTNPMFSYLDLNIKRYWDLLIWMDKFNFSGLACI 1923

Query: 1681 ADESLDDDSQVDIVSSWNIAEYLPKEIQDHFVLVVSEFMYIPWKHAQKLAASRASLQEGS 1740
              E   ++     VS W + ++L    Q  F     ++M I      K   S   L  G+
Sbjct: 1924 EIEE-KENQDYTAVSQWQLKKFLSPIYQPEF----EDWMMIILDSMLKTKQSYLKLNSGT 1978

Query: 1741 SCTPSITVAAAENFESHIVQYVKGEISSYFTGKLLSIVRDAIHHMKKMNND-QHNSPGVM 1799
                 I     ++ E  +   + G  S  F+  L+  V+    + ++   D Q+ +  V+
Sbjct: 1979 QRPTQIVNVKKQDKEDSVENSLNG-FSHLFSKPLMKRVKKLFKNQQEFILDPQYEADYVI 2037

Query: 1800 QTAANIH-KVDAP-LEFIKHVCAAFALDQNVQHDVLVMRKNLLKYVRVREFAPEAEFRDP 1857
                  H  V  P LE +K +C    L ++   ++  +RK LLK   +REFA  AEF+DP
Sbjct: 2038 PVLPGSHLNVKNPLLELVKSLCHVMLLSKSTILEIRTLRKELLKIFELREFAKVAEFKDP 2097

Query: 1858 CPSFILPNVICSYCNDCRDLDLCRDMALLAQDWHCAMPQCGQPYDREVMENALLQIVRQR 1917
              S ++P+ +C YC    D+D C+  A     + C   +C + +++ +++  L+Q +R  
Sbjct: 2098 SLSLVVPDFLCEYCFFISDIDFCK--AAPESIFSCV--RCHKAFNQVLLQEHLIQKLRSD 2153

Query: 1918 ERLYHLQDLVCIRCNQVKAAHLAEQCACAGSFRCKEDASDFRSKMQIFLNIANRQGFQLL 1977
               Y +QDL C RC++VK  +++  C CAG++           K+ +F  +A   GF +L
Sbjct: 2154 IESYLIQDLRCSRCHKVKRDYMSAHCPCAGAWEGTLPRESIVQKLNVFKQVAKYYGFDIL 2213

Query: 1978 QECTS 1982
              C +
Sbjct: 2214 LSCIA 2218


>gi|198432285|ref|XP_002121029.1| PREDICTED: similar to DNA polymerase epsilon catalytic subunit [Ciona
            intestinalis]
          Length = 2223

 Score = 1324 bits (3426), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 671/1413 (47%), Positives = 951/1413 (67%), Gaps = 74/1413 (5%)

Query: 25   EELEAKLGYDLFSEGDKRLGWLLTFASSSLEDEDTRKVYSCIDLYFVSQDGSTFKSKYKF 84
            E L+ K GY+   +  ++LGWL+  +++   DE+ R V S +D YF+  DG  FK    +
Sbjct: 31   EVLDEKYGYEKLKQPCQKLGWLINLSAADCLDENKRMV-SAVDYYFLQDDGKRFKVTLPY 89

Query: 85   RPYFYAATKEKMEMDVEAYLRRRYESQIADIEILEKEDLDLKNHLSGLHKSYLKISFDTV 144
             PYFY A K+  E +  +YL++++ S+I  IE+++KEDLDL NHL GL ++YLK+SF  V
Sbjct: 90   NPYFYLAVKKGTEQETLSYLKKKF-SRIHTIEVVKKEDLDLHNHLVGLKRTYLKLSFYHV 148

Query: 145  QQLMDVKKDLLHVVERNQAKFDAAEAYESI----LTGKREQ------RPQDFLDCIVDLR 194
              +  V++ +   V +N+ +   +  Y ++    L G+ EQ      + Q+ LD +VD+R
Sbjct: 149  DDMTSVRQAVHRSVRKNKEREKDSSVYSNMFSSELGGQSEQSYGSSSKTQEQLDNLVDIR 208

Query: 195  EYDVPYHIRFAIDNDVRCGQWYDVSI--SSTGPLLEKRVDLLQRAEVHVCAFDIETTKLP 252
            EYDVPYH+R  I+  +  G WY V    +S  P++  R DLL+R +  V A+DIETTKLP
Sbjct: 209  EYDVPYHVRVGINLKIHVGLWYKVQYRGNSLPPIITHRPDLLERPDPVVLAYDIETTKLP 268

Query: 253  LKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNVNNEIE 312
            LKFPDA+ D I+MISYM+DG GYLI NR+ V  D+ED E+TPKPEFEG F V N  +E+ 
Sbjct: 269  LKFPDAETDNIIMISYMIDGHGYLICNRDIVSMDVEDFEFTPKPEFEGRFTVFNEKDELS 328

Query: 313  LLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDKNQGECRAKF 372
             +  +F H+ EVKP ++VTYNGD+FDWPF+E+RA   G  M  E+GF  D +QGE +++ 
Sbjct: 329  TINRFFDHVLEVKPHVFVTYNGDFFDWPFVESRARILGLDMLREIGFSKD-SQGEYKSRQ 387

Query: 373  ACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQMMASYSVS 432
            A H+D + WVKRDSYLP GSQ LKA  KAKL YDP+E++PE++ R A E+PQ +A+YSVS
Sbjct: 388  ASHMDAYKWVKRDSYLPVGSQNLKAAAKAKLRYDPVELDPEEICRLASEEPQTLANYSVS 447

Query: 433  DAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVICPNKHQ 492
            DAVATYYLYM YVHPFIF+L TIIPM PD VLRKGSGTLCE LLMVQA+ AN++ PNK +
Sbjct: 448  DAVATYYLYMKYVHPFIFALCTIIPMEPDSVLRKGSGTLCEALLMVQAFHANIVFPNKQE 507

Query: 493  SDPEKFYRN-HLLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQLLNNLDRDLQYA 551
            +   K   + HLL+SETY+GGHVE LE GVFR+D+ +SF+ DP+AY+ L + ++R +++ 
Sbjct: 508  TVYNKLTNDGHLLDSETYVGGHVEALECGVFRADISSSFRGDPTAYQDLHDQVERTIKFC 567

Query: 552  IKVEGKMDLESVSNYDEVKNAIMEKLLRLQEEPIREECPLIYHLDVAAMYPNIILTNRLQ 611
            I+ E K+ LE V N DEV   I +KLL L++ PIR E P+IYHLDV AMYPNIILTNRLQ
Sbjct: 568  IETEEKIPLEEVVNMDEVCKDIKQKLLSLRDNPIRSENPVIYHLDVGAMYPNIILTNRLQ 627

Query: 612  PPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYYHLKKQIESEFVDGTNGH 671
            P ++V +  C ACDFN+PG TC R + W+WRGE     +++++ +++Q+E+E V   N  
Sbjct: 628  PSAMVNETTCAACDFNKPGSTCQRTMNWMWRGEYLPASKNEFHRIQQQLENERVPDPNIP 687

Query: 672  LSK-SFLDLPKMEQQSRLKDRLKKYCQKAYKRVLDKPVTELREAGICMRENSFYVDTVRS 730
              +  + ++ K EQ +  K RL+ YC++AYK+   K + E +   +C RENSFYVDTVR 
Sbjct: 688  GKQVPYQEVSKEEQANLAKSRLQAYCRRAYKKTKVKRLEE-KYTTVCQRENSFYVDTVRM 746

Query: 731  FRDRRYEYKGLNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHKCILNSFYGYVM 790
            FRDRRYE+K   K  K +++ A  +G++ ++++A+ + VLYDSLQLAHKCILNSFYGYVM
Sbjct: 747  FRDRRYEFKASLKRAKKQVAAAMETGDATEVKKAKGLEVLYDSLQLAHKCILNSFYGYVM 806

Query: 791  RKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLPGSFPENFTFKT 850
            R+GARWYSMEMAG+V +TGAKIIQ+AR LI+KIG+PLELDTDGIWC+LP SFPEN+T +T
Sbjct: 807  RRGARWYSMEMAGIVCFTGAKIIQDARKLIDKIGRPLELDTDGIWCILPSSFPENYTIET 866

Query: 851  KDLKK-KLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEFEVDGPYKAM 909
             + KK ++TISYP  +LNV V  N TN QY+ L +P + TYE  SE SI FEVDGPY  M
Sbjct: 867  TNAKKPEVTISYPGAILNVMVKDNFTNHQYEELTEPSTLTYERRSENSIFFEVDGPYLGM 926

Query: 910  ILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFLHGSTIE 969
            +LPA+KEEG  +KKRYAVFN DG+LAELKGFE+KRRGEL+LIK+FQ+ +F +FL G T+E
Sbjct: 927  VLPAAKEEGKSLKKRYAVFNFDGSLAELKGFEVKRRGELQLIKIFQSSVFGEFLKGKTLE 986

Query: 970  ECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLADYGEQKSCAVTTARRL 1029
            E Y A+A VA+ WLD+L ++  ++ DSEL + I+E+ +MS+ L DYG QKS +++TA+RL
Sbjct: 987  EVYQAIAKVADYWLDVLYSKAGNMPDSELFELITENRSMSRKLEDYGTQKSTSISTAKRL 1046

Query: 1030 SDFLGDTMVKDKGLRCQYIVACEPQGTPVSERAVPVAIFETDAEIMKFYLRKWCKTS--S 1087
            ++FLGD MVKD GL C++I++ +P+G PV+ERA+P+AIF+++  I + YLRKW K    +
Sbjct: 1047 AEFLGDQMVKDAGLSCRFIISHKPEGAPVTERAIPMAIFQSEDSIKRHYLRKWTKQGNMT 1106

Query: 1088 DVGIRSIVDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLYKKVREKEDKFRQ 1147
            D  IR+I+DW+YY +RL SA+QKIIT+PAA+Q ++NPVPR+ HPDWL+KK+ EK D ++Q
Sbjct: 1107 DFDIRAILDWNYYIERLGSAVQKIITLPAALQGITNPVPRIKHPDWLHKKLMEKNDVYKQ 1166

Query: 1148 RKLVDIFSSLKKDDFLNKTCNAETNLMD-ENVEDLEDFPKKRRNSVNGPRPIVRCFEVNN 1206
            +++ D+F    K   L+ +   E  ++D EN+            S +   P++       
Sbjct: 1167 KRITDMFQVCTKKRPLDGSSEEEDVVVDIENI-----------GSTSTRDPLLPSVTKRR 1215

Query: 1207 EQKTVKTTDQ-VDSLRQQL-EPSEVSDQQPSSQNAIDTENIDRIVDYKGWLELKKRKWKD 1264
            ++ +++  +  V   +  L  P  +SD     +   D            WL    +KW  
Sbjct: 1216 KKDSIEPVENDVGDWKSILGSPPPISDLFTGLRGQRDE-----------WLNFHYKKW-- 1262

Query: 1265 NLDRRKKQKLGSLRASHQANGVSESLGDMINHKEAQRRTGVG--SYFRRQETAMTRCHWQ 1322
              + +KKQ+ G                   N    + RTG G   +  +Q  ++    WQ
Sbjct: 1263 --ELQKKQRKG-------------------NKNITKTRTGKGLDRFIHQQTHSILNSRWQ 1301

Query: 1323 IIQLVPSSQSGVFLAWVVVEGIMVRIPITVPRLFYLNS---KDPIVEKFPGRRVNKTLPH 1379
            ++Q V +   G+F  + ++   +  + + VPR+FY+N    K+P  +  P R+V + LP 
Sbjct: 1302 VLQAVETETPGLFKIFALIGSELHTLKVYVPRIFYVNQKSKKEPGNKDVPWRKVFRLLPR 1361

Query: 1380 GRRSFNLIEVMIDEDQFRKESKKLAALLADPEV 1412
              +  NL E  + E+Q+++   ++ + L  P++
Sbjct: 1362 SAQVLNLYEYRMTEEQYQQHICEIRSELMSPDI 1394



 Score =  271 bits (692), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 167/574 (29%), Positives = 300/574 (52%), Gaps = 36/574 (6%)

Query: 1442 LARYAHILWISDDGVPDLGGTSEEDECFADEVHQPV---LTYPGAYRKVSVELKIHHLSV 1498
            L ++ H+LW S    PD+GG   ED+       +     +   G Y+ V ++L I  L+V
Sbjct: 1651 LRKHNHVLWCSTGDQPDVGGMETEDKRIGMNQRRNASIEINNSGFYQTVCIQLDISSLAV 1710

Query: 1499 NALLKSNQVNEMEGGGLFG--FDQDMNSGPYNNELC--GFDETTSSAPAFRVVKQLIQRC 1554
            N +L+S+ +N+ EG    G  F+ D+ S   +  +C   +DET   +  FR++K +I   
Sbjct: 1711 NTVLQSHNINDTEGMSSSGVCFEGDLVSSSNSAMVCLANYDETVLCSSTFRILKSMILGW 1770

Query: 1555 LTDAVTSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEFRKLGAT 1614
            L D     N  AD  LQ+ ++W+    S  +DP +H+ L  +M+K+   LL+E ++LG+T
Sbjct: 1771 LRDVSVHKNHLADNQLQNFHQWVTDKSSLFYDPSIHKSLQMMMKKLILRLLSELKRLGST 1830

Query: 1615 IIFANFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLFMDQYNY 1674
            IIFANFS +++ T K ++    +Y + +  ++ ++++F  + L     W  LL+MD  NY
Sbjct: 1831 IIFANFSSIVLCTKKQNVEDTLSYMEYISNSIVSKDIFHSMVLTVRKCWKHLLWMDNANY 1890

Query: 1675 GGIPARADES--LDDDSQV-------DIVSSWN--IAEYLPK--EIQDHFVLVVSEFMYI 1721
            GG+    + +  ++ DS         D+++  N  + +YLP   E+Q +F  V++ ++ +
Sbjct: 1891 GGMKVVLNHTNQVNSDSITNKLAPTGDVMAEMNFVLGQYLPSRAEVQQNFEAVIAGYISL 1950

Query: 1722 PWKHAQKLAASRAS-----LQEGSSCTP-SITVAAAENFESHIVQYVKGEISSYFTGKLL 1775
             +    K  + R       L  G++ T  S ++   ++ + HIV + +  I+     ++ 
Sbjct: 1951 VYNEYVKEKSGREPDSTPVLPRGNTQTQLSESINVEDSNKPHIVTFSQQLINKDVMEQMF 2010

Query: 1776 SIVRDAIHHMKKMNNDQHNSPGVM---QTAANIHKVDAPLEFIKHVCAAFALDQNVQHDV 1832
               R +   ++K++++  N    M      + +   +  LE +K +C   +LD+NV   V
Sbjct: 2011 ---RTSTTTLRKLSSNDANILSSMFPRLPGSQLQLNNPTLELVKSICHVLSLDENVTAQV 2067

Query: 1833 LVMRKNLLKYVRVREFAPEAEFRDPCPSFILPNVICSYCNDCRDLDLCRDMALLAQ--DW 1890
              +R+NLL+ + V EFAP A++ DPC S+I+ ++ CS C    DLD+CR    +     W
Sbjct: 2068 ESLRRNLLRLIGVGEFAPSADWIDPCASYIIGHMTCSSCALNHDLDVCRHAVTVNGTCKW 2127

Query: 1891 HCAMPQCGQPYDREVMENALLQIVRQRERLYHLQDLVCIRCNQVKAAHLAEQCACAGSFR 1950
             C    C  PYD + +E  L++ V+++   Y+LQD+VC +C  V  +++  +C CAG F+
Sbjct: 2128 LCR--GCRHPYDEKWIEQQLVEDVQRKMVEYNLQDIVCKKCKLVNQSNMNRRCECAGEFQ 2185

Query: 1951 CKEDASDFRSKMQIFLNIANRQGFQLLQECTSWI 1984
                +S F+  ++IF NIA+      L +   WI
Sbjct: 2186 LTNHSSSFKETLKIFRNIASFAKLDYLNKNIDWI 2219


>gi|431912092|gb|ELK14230.1| DNA polymerase epsilon catalytic subunit A [Pteropus alecto]
          Length = 1930

 Score = 1324 bits (3426), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 705/1510 (46%), Positives = 955/1510 (63%), Gaps = 177/1510 (11%)

Query: 8    RQDGRRTKKQKLIR----SAEEELEAKLGYDLFSEGDKRLGWLLTFASSSLEDEDTRKVY 63
            R DG  +    L R       ++++ + G++   E  ++ GWL+    + + DED R + 
Sbjct: 13   RDDGPSSSASALKRLERSQWTDKMDLRFGFERLKEPGEKTGWLINMHPTEVLDEDKRLI- 71

Query: 64   SCIDLYFVSQDGSTFKSKYKFRPYFYAATKEKMEMDVEAYLRRRYESQIADIEILEKEDL 123
            S +D YF+  DGS FK                 E +V ++L ++++ +IA +E + KEDL
Sbjct: 72   SAVDYYFIQDDGSRFKG---------------CEREVSSFLSKKFQGKIAKVETVPKEDL 116

Query: 124  DLKNHLSGLHKSYLKISFDTVQQLMDVKKDLLHVVERNQAKFDAAEAYESILTG------ 177
            DL NHL GL ++Y+K+SF+TV+ L+ V+K++   V++N+ +  A +AY ++L+       
Sbjct: 117  DLPNHLVGLKRNYVKLSFNTVEDLVRVRKEISPAVKKNREQSHARDAYTAMLSSVLQGGG 176

Query: 178  ------KREQRPQDFLDCIVDLREYDVPYHIRFAIDNDVRCGQWYDVSISSTG-PL-LEK 229
                  +  ++  D LD IVD+REYDVPYHIR +ID  +    WY+V       P+ L +
Sbjct: 177  AIVDEEETSKKIADQLDNIVDMREYDVPYHIRLSIDLKIHVAHWYNVRFRGNAFPVELTR 236

Query: 230  RVDLLQRA-EVH---------------------------------VCAFDIETTKLPLKF 255
            R DL++R  EV                                  V AFDIETTKLPLKF
Sbjct: 237  RDDLVERPLEVEQLVVGVERTTRVSRARLNVWPTQCYIVSLQDPVVLAFDIETTKLPLKF 296

Query: 256  PDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNVNNEIELLR 315
            PDA+ D IMMISYM+DGQGYLI NRE V EDI+D E+TPKPE+EG F V N  +E++   
Sbjct: 297  PDAETDQIMMISYMIDGQGYLITNREIVAEDIDDFEFTPKPEYEGPFCVFNEPDEVKR-- 354

Query: 316  LWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDKNQGECRAKFACH 375
                                    PF+E RAA HG  M +E+GFQ D +QGE +A    H
Sbjct: 355  ------------------------PFVEARAAAHGLSMYQEIGFQKD-SQGEYKAPQCIH 389

Query: 376  LDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQM---------- 425
            +DC  WVKRDSYLP GS  LKA  KAKLGYDP+E++PEDM R A E+PQ+          
Sbjct: 390  MDCLRWVKRDSYLPVGSHNLKAAAKAKLGYDPVELDPEDMCRMATEQPQVHVPLLSRLPG 449

Query: 426  ------------------------------MASYSVSDAVATYYLYMTYVHPFIFSLATI 455
                                          +A+YSVSDAVATYYLYM YVHPFIF+L TI
Sbjct: 450  NLGYGGGPRCWGVGLLEVLSPLPLTFSPQTLATYSVSDAVATYYLYMKYVHPFIFALCTI 509

Query: 456  IPMSPDEVLRKGSGTLCEMLLMVQAYKANVICPNKHQSDPEKFYRN-HLLESETYIGGHV 514
            IPM PDEVLRKGSGTLCE LLMVQA+ AN++ PNK + +  K   + H+L+SETY+GGHV
Sbjct: 510  IPMEPDEVLRKGSGTLCEALLMVQAFHANIVFPNKQEQEFNKLTDDGHVLDSETYVGGHV 569

Query: 515  ECLESGVFRSDLPTSFKLDPSAYEQLLNNLDRDLQYAIKVEGKMDLESVSNYDEVKNAIM 574
            E LESGVFRSD+P  F+++P+A++ LL  +++ +++AI+ E K+ +E V+N+ EV + I 
Sbjct: 570  EALESGVFRSDIPCRFRMNPAAFDFLLQRVEKTIRHAIEEEEKVPMEQVTNFQEVCDQIK 629

Query: 575  EKLLRLQEEPIREECPLIYHLDVAAMYPNIILTNRLQPPSIVTDEVCTACDFNRPGKTCL 634
             KL  L++ P R ECPLIYHLDV AMYPNIILTNRLQP ++V +  C ACDFN+PG  C 
Sbjct: 630  NKLTSLRDVPNRIECPLIYHLDVGAMYPNIILTNRLQPSAMVDEATCAACDFNKPGANCQ 689

Query: 635  RKLEWVWRGEIFMGKRSDYYHLKKQIESE-FVDGTNGHLSKSFLDLPKMEQQSRLKDRLK 693
            RK+ W WRGE     RS+Y+ ++ Q+ESE F   T    +++F +L + EQ    K RL 
Sbjct: 690  RKMAWQWRGEFMPASRSEYHRIQHQLESEKFPALTAEGPTRAFHELSREEQAKYEKRRLA 749

Query: 694  KYCQKAYKRVLDKPVTELREAGICMRENSFYVDTVRSFRDRRYEYKGLNKVWKGKLSEAK 753
             YC+KAYK++    V E R   IC RENSFYVDTVR+FRDRRYE+KGL+KVWK KL  A 
Sbjct: 750  DYCRKAYKKIHVTKVEE-RLTTICQRENSFYVDTVRAFRDRRYEFKGLHKVWKRKLCAAV 808

Query: 754  ASGNSIKIQEAQDMVVLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKII 813
             +G++ +++  ++M VLY+SLQLAHKCILNSFYGYVMRKGARWYSMEMAG+V +TGA II
Sbjct: 809  EAGDAAEVRRCKNMEVLYESLQLAHKCILNSFYGYVMRKGARWYSMEMAGIVCFTGASII 868

Query: 814  QNARLLIEKIGKPLELDTDGIWCVLPGSFPENFTFKTKDLKK-KLTISYPCVMLNVDVAR 872
              AR LIE+IG+PLELDTDGIWCVLP SFPENF  KT  +KK K+TISYP  MLN+ V  
Sbjct: 869  TQARELIEQIGRPLELDTDGIWCVLPNSFPENFVIKTTSVKKPKVTISYPGAMLNIMVKE 928

Query: 873  NNTNDQYQTLVDPVSKTYETHSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDG 932
              TNDQYQ L +P S TY T SE SI FEVDGPY AMILPASKEEG  +KKRYAVFN+DG
Sbjct: 929  GFTNDQYQELAEPASLTYVTRSENSIFFEVDGPYLAMILPASKEEGKKLKKRYAVFNEDG 988

Query: 933  TLAELKGFEIKRRGELKLIKVFQAELFDKFLHGSTIEECYSAVAAVANRWLDLLDNQGKD 992
            +LAELKGFE+KRRGEL+LIK+FQ+ +F+ FL GST+EE Y +VA VA+ WLD+L ++  +
Sbjct: 989  SLAELKGFEVKRRGELQLIKIFQSSVFEAFLKGSTLEEVYGSVAKVADYWLDVLYSKAAN 1048

Query: 993  IADSELIDYISESSTMSKSLADYGEQKSCAVTTARRLSDFLGDTMVKDKGLRCQYIVACE 1052
            + D+EL + ISE+ +MS+ L +YGEQKS +++TA+RL++FLGD MVKD GL C+YI++ +
Sbjct: 1049 MPDAELFELISENRSMSRKLEEYGEQKSTSISTAKRLAEFLGDQMVKDAGLSCRYIISRK 1108

Query: 1053 PQGTPVSERAVPVAIFETDAEIMKFYLRKWCKTSS--DVGIRSIVDWSYYKQRLSSAIQK 1110
            P+G+PV+ERA+P+AIF+ +  + + +LRKW K+SS  D  IR+I+DW YY +RL SAIQK
Sbjct: 1109 PEGSPVTERAIPLAIFQAEPTVRRHFLRKWLKSSSLQDFDIRTILDWDYYIERLGSAIQK 1168

Query: 1111 IITIPAAMQKVSNPVPRVVHPDWLYKKVREKEDKFRQRKLVDIFSSLKKDDFLNKTCNAE 1170
            IITIPAA+Q+V NPVPRV HPDWL+KK+ EK D ++Q+K+ ++F    +         A 
Sbjct: 1169 IITIPAALQQVKNPVPRVRHPDWLHKKLLEKNDIYKQKKISELFVLEGRRQV--SVAQAL 1226

Query: 1171 TNLMDENVEDLEDFPKKRRNSVNGPRPIVRCFEVNNEQKTVKTTDQVDS--LRQQLEPSE 1228
               +     D+EDF           +P      V+ ++K +    Q +S  L   +   E
Sbjct: 1227 AGTLSPGAPDMEDF--------GLAKPPHSAVPVSTKRKRILWESQEESQDLGLTVPWQE 1278

Query: 1229 VSDQQPSSQNAIDTENIDRIVDYKGWLELKKRKW----KDNLDRRKKQKLGSLRASHQAN 1284
            V  + P    A+ T   + +V    WL   K+KW    +  L RRK+Q+L +   + Q  
Sbjct: 1279 VLGRPP----ALGTTQEEWLV----WLRFHKKKWQLQARQRLARRKRQRLDTAEGAPQPG 1330

Query: 1285 GVSESLGDMINHKEAQRRTGVGSYFRRQETAMTRCHWQIIQLVPSSQSGVFLAWVVVEGI 1344
             V E              TG+G + RR   ++    WQI+Q+  +SQ+G F  W V+   
Sbjct: 1331 AVREGPA-----------TGLGGFLRRTARSILDLPWQIVQISETSQAGAFRLWAVIGSD 1379

Query: 1345 MVRIPITVPRLFYLNSKDPIVEKFPG-RRVNKTLPHGRRSFNLIEVMIDEDQFRKESKKL 1403
            +  I ++VPR+FY+N + P  E+ P  R+VN+ LP     +NL E  + ED +++   ++
Sbjct: 1380 LYCIKLSVPRVFYVNQRVPKAEEGPSYRKVNRVLPRSNMVYNLYEYSVPEDMYQEHINEI 1439

Query: 1404 AALLADPEVE 1413
               L+ P++E
Sbjct: 1440 NTELSAPDIE 1449



 Score =  154 bits (389), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 85/224 (37%), Positives = 126/224 (56%), Gaps = 13/224 (5%)

Query: 1442 LARYAHILWISDDGVPDLGGTSEEDECFADEVHQPV---LTYPGAYRKVSVELKIHHLSV 1498
            L R+ H+LW+S    PDLGG   +D     E        +   G Y  V VEL I +L+V
Sbjct: 1702 LQRHNHLLWLSPTSRPDLGGKEADDNRLVMEFEDQATVEINSSGCYSTVCVELDIQNLAV 1761

Query: 1499 NALLKSNQVNEMEGGGLFG--FD-------QDMNSG-PYNNELCGFDETTSSAPAFRVVK 1548
            N +L+S+ VN+MEG    G  FD       +DM +G    +    +DET   +  FRV+K
Sbjct: 1762 NTILQSHHVNDMEGADSMGVSFDVIQQASLEDMITGNQAASAPASYDETALCSSTFRVLK 1821

Query: 1549 QLIQRCLTDAVTSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEF 1608
             ++   + +     NV+AD  + H YRWL SP S LHDP LHR LH +M+K+F  L+AEF
Sbjct: 1822 SMVVGWVKEITQYRNVYADNQVMHFYRWLRSPASLLHDPALHRTLHSMMKKLFLQLIAEF 1881

Query: 1609 RKLGATIIFANFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELF 1652
            ++LG+++++ANF++V++ T K  +  A AY + +    Q R L 
Sbjct: 1882 KRLGSSVVYANFNRVVLCTKKRRVEDAVAYVEYITSRCQRRPLL 1925


>gi|392297089|gb|EIW08190.1| Pol2p [Saccharomyces cerevisiae CEN.PK113-7D]
          Length = 2221

 Score = 1323 bits (3424), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 688/1412 (48%), Positives = 919/1412 (65%), Gaps = 104/1412 (7%)

Query: 42   RLGWLLTFASSSLEDED------------------TRKVYSCIDLYFVSQDGSTFKSKYK 83
            R+GWL    ++ +  E                   T +  S +D YF+ ++G +FKS   
Sbjct: 74   RVGWLTNMHATLVSQETLSSGSNGGGNSNDGERVTTNQGVSGVDFYFLDEEGGSFKSTVV 133

Query: 84   FRPYFYAATKEKMEM-DVEAYLRRRYESQIADIEILEKEDLDLKNHLSGLHKSYLKISFD 142
            + PYF+ A  ++  + DVE  +++  ES +  ++I+ KEDL + NHL GL K+ +K+SF 
Sbjct: 134  YDPYFFIACNDESRVNDVEELVKKYLESCLKSLQIIRKEDLTMDNHLLGLQKTLIKLSFV 193

Query: 143  TVQQLMDVKKDLLHVVERNQAKFDAAEAYESILTGKREQRPQDFLDCIVDLREYDVPYHI 202
               QL + +K L  +++ N         Y     G  +    D    I D+REYDVPYH+
Sbjct: 194  NSNQLFEARKLLRPILQDNANNNVQRNIYNVAANGSEKV---DAKHLIEDIREYDVPYHV 250

Query: 203  RFAIDNDVRCGQWYDVSISSTGPLLEKRVDLLQRAEVHVCAFDIETTKLPLKFPDADYDI 262
            R +ID D+R G+WY V+    G + + R   +  A+  V AFDIETTK PLKFPD+  D 
Sbjct: 251  RVSIDKDIRVGKWYKVT--QQGFIEDTRK--IAFADPVVMAFDIETTKPPLKFPDSAVDQ 306

Query: 263  IMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNVNNEIELLRLWFAHMQ 322
            IMMISYM+DG+G+LI NRE + EDIED EYTPKPE+ G+F + N N+E+ LL+ +F H++
Sbjct: 307  IMMISYMIDGEGFLITNREIISEDIEDFEYTPKPEYPGFFTIFNENDEVALLQRFFEHIR 366

Query: 323  EVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDKNQGECRAKFACHLDCFAWV 382
            +V+P +  T+NGD+FDWPF+  R+  HG  M +E+GF  D  +GE ++ +  H+DCF WV
Sbjct: 367  DVRPTVISTFNGDFFDWPFIHNRSKIHGLDMFDEIGFAPDA-EGEYKSSYCSHMDCFRWV 425

Query: 383  KRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQMMASYSVSDAVATYYLYM 442
            KRDSYLPQGSQGLKAVT++KLGY+P+E++PE M  +A EKPQ ++ YSVSDAVATYYLYM
Sbjct: 426  KRDSYLPQGSQGLKAVTQSKLGYNPIELDPELMTPYAFEKPQHLSEYSVSDAVATYYLYM 485

Query: 443  TYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVICPNKHQSDPEKFYRNH 502
             YVHPFIFSL TIIP++PDE LRKG+GTLCEMLLMVQAY+ N++ PNKH    E+FY  H
Sbjct: 486  KYVHPFIFSLCTIIPLNPDETLRKGTGTLCEMLLMVQAYQHNILLPNKHTDPIERFYDGH 545

Query: 503  LLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQLLNNLDRDLQYAIKVEGKMDLES 562
            LLESETY+GGHVE LE+GVFRSDL   FK+DPSA ++LL  L   L+++++VE K  ++ 
Sbjct: 546  LLESETYVGGHVESLEAGVFRSDLKNEFKIDPSAIDELLQELPEALKFSVEVENKSSVDK 605

Query: 563  VSNYDEVKNAIMEKLLRLQEEPIREECPLIYHLDVAAMYPNIILTNRLQPPSIVTDEVCT 622
            V+N++E+KN I +KLL L+E  IR E PLIYH+DVA+MYPNI+ TNRLQP SI T+  C 
Sbjct: 606  VTNFEEIKNQITQKLLELKENNIRNELPLIYHVDVASMYPNIMTTNRLQPDSIKTERDCA 665

Query: 623  ACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYYHLKKQIESEFVDGTNGHLSK---SFLDL 679
            +CDFNRPGKTC RKL+W WRGE F  K  +Y  +K+ +++E     N    K   +F +L
Sbjct: 666  SCDFNRPGKTCARKLKWAWRGEFFPSKMDEYNMIKRALQNETFPNKNKFSKKKVLTFDEL 725

Query: 680  PKMEQQSRLKDRLKKYCQKAYKRVLDKPVTELREAGICMRENSFYVDTVRSFRDRRYEYK 739
               +Q   +K RL +Y +K Y RV    + E REA +C REN FYVDTV+SFRDRRYE+K
Sbjct: 726  SYADQVIHIKKRLTEYSRKVYHRVKVSEIVE-REAIVCQRENPFYVDTVKSFRDRRYEFK 784

Query: 740  GLNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHKCILNSFYGYVMRKGARWYSM 799
            GL K WKG LS+   S    +  EA+ M+VLYDSLQLAHK ILNSFYGYVMRKG+RWYSM
Sbjct: 785  GLAKTWKGNLSKIDPSDKHAR-DEAKKMIVLYDSLQLAHKVILNSFYGYVMRKGSRWYSM 843

Query: 800  EMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLPGSFPENFTFKTKDLKKKLTI 859
            EMAG+   TGA IIQ AR L+E++G+PLELDTDGIWC+LP SFPE + F T +  KKL +
Sbjct: 844  EMAGITCLTGATIIQMARALVERVGRPLELDTDGIWCILPKSFPETYFF-TLENGKKLYL 902

Query: 860  SYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEFEVDGPYKAMILPASKEEGI 919
            SYPC MLN  V +  TN QYQ L DP++  YETHSE +I FEVDGPYKAMILP+SKEEG 
Sbjct: 903  SYPCSMLNYRVHQKFTNHQYQELKDPLNYIYETHSENTIFFEVDGPYKAMILPSSKEEGK 962

Query: 920  LIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFLHGSTIEECYSAVAAVA 979
             IKKRYAVFN+DG+LAELKGFE+KRRGEL+LIK FQ+++F  FL G T+E CYSAVA+V 
Sbjct: 963  GIKKRYAVFNEDGSLAELKGFELKRRGELQLIKNFQSDIFKVFLEGDTLEGCYSAVASVC 1022

Query: 980  NRWLDLLDNQGKDIADSELIDYISESSTMSKSLADYGEQKSCAVTTARRLSDFLGDTMVK 1039
            NRWLD+LD+ G  + D +L+  I E+ +MSK+L +Y  QKS ++TTARRL DFLG+ MVK
Sbjct: 1023 NRWLDVLDSHGLMLEDEDLVSLICENRSMSKTLKEYEGQKSTSITTARRLGDFLGEDMVK 1082

Query: 1040 DKGLRCQYIVACEPQGTPVSERAVPVAIFETDAEIMKFYLRKWCKTSS--DVGIRSIVDW 1097
            DKGL+C+YI++ +P   PV+ERA+PVAIF  D  I + +LR+W    S  D+ IR+I+DW
Sbjct: 1083 DKGLQCKYIISSKPFNAPVTERAIPVAIFSADIPIKRSFLRRWTLDPSLEDLDIRTIIDW 1142

Query: 1098 SYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLYKKVREKEDKFRQRKLVDIFSSL 1157
             YY++RL SAIQKIITIPAA+Q VSNPVPRV HPDWL +K+  KEDKF+Q  L   FS  
Sbjct: 1143 GYYRERLGSAIQKIITIPAALQGVSNPVPRVEHPDWLKRKIATKEDKFKQTSLTKFFS-- 1200

Query: 1158 KKDDFLNKTCNAETNLMDENVEDLEDFPKKRRNSVNGPRPIVRCFEVNNEQKTVKTTDQ- 1216
                   KT N  T    +++EDL +             P V   E N + K  +TT + 
Sbjct: 1201 -------KTKNVPTMGKIKDIEDLFE-------------PTVE--EDNAKIKVARTTKKK 1238

Query: 1217 --VDSLRQQLEPSEVSDQQPSSQNAIDTENIDRIVDYKGWLELKKRKWK-DNLDRRKKQK 1273
                  R QL   E     PS   ++D        DY GWL  +K KWK    DR+++ +
Sbjct: 1239 AVSKRKRNQLTNEEDPLVLPSEIPSMDE-------DYVGWLNYQKIKWKIQARDRKRRDQ 1291

Query: 1274 LGSLRASHQANGVSESLGDMINHKEAQRRTGVGSYFRRQETAMTRCHWQIIQLVPSSQSG 1333
            L                    N   ++ R+ +GS  R+Q  +     W+++Q   S + G
Sbjct: 1292 LFG------------------NTNSSRERSALGSMIRKQAESYANSTWEVLQYKDSGEPG 1333

Query: 1334 VFLAWVVVEGIMVRIPITVPRLFYLNSKDPIVEKFPGRRV--------NKTLPHGRRSFN 1385
            V   +V + G +  I   +P+  Y+  K    +  P +++        + +LP+  ++ N
Sbjct: 1334 VLEVFVTINGKVQNITFHIPKTIYMKFKS---QTMPLQKIKNCLIEKSSASLPNNPKTSN 1390

Query: 1386 -----LIEVMIDEDQFRKESKKLAALLADPEV 1412
                 L ++ + E  F +E +   ++  D  V
Sbjct: 1391 PTVGQLFKITLPESVFLEEKENCTSIFNDENV 1422



 Score =  214 bits (546), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 149/605 (24%), Positives = 278/605 (45%), Gaps = 48/605 (7%)

Query: 1415 LGWQQNAAKIGMQRCAASSQWFNERISLARYAHI-------------------------- 1448
            L WQ    K  +    +S  W +  I L++Y++I                          
Sbjct: 1624 LNWQPTLLKKLVNHVLSSGSWISHLIKLSQYSNIPICNLRLDSMDYVIDVLYARKLKKEN 1683

Query: 1449 --LWISDDG-VPDLGGTSEEDEC----FADEVHQPVLTYPGAYRKVSVELKIHHLSVNAL 1501
              LW ++   +PD GG   + +       ++   P +   G Y  V +++ + +L+VN +
Sbjct: 1684 IVLWWNEKAPLPDHGGIQNDFDLNTSWIMNDSEFPKINNSGVYDNVVLDVGVDNLTVNTI 1743

Query: 1502 LKSNQVNEMEGGGLFGFDQDMN-SGPYNNELCGFDETTSSAPAFRVVKQLIQRCLTDAVT 1560
            L S  +N+ EG  L   +  ++      N    F     S  A  V++ +++    +A+ 
Sbjct: 1744 LTSALINDAEGSDLVNNNMGIDDKDAVINSPSEFVHDAFSNDALNVLRGMLKEWWDEALK 1803

Query: 1561 SGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEFRKLGATIIFANF 1620
              N  AD ++  L  W+ +P++KL D +L   +H + +K    L+ EF  LG+TI++A+ 
Sbjct: 1804 E-NATADLLVNSLASWVQNPNAKLFDGLLRYHVHNLTKKALLQLVNEFSALGSTIVYADR 1862

Query: 1621 SKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLFMDQYNYGGIPAR 1680
            ++++I T K+      AY   ++KA++T  +F +++L    +W  L++MD++N+ G+   
Sbjct: 1863 NQILIKTNKYSPENCYAYSQYMMKAVRTNPMFSYLDLNIKRYWDLLIWMDKFNFSGLACI 1922

Query: 1681 ADESLDDDSQVDIVSSWNIAEYLPKEIQDHFVLVVSEFMYIPWKHAQKLAASRASLQEGS 1740
              E   ++      S W + ++L    Q  F     ++M I      K   S   L  G+
Sbjct: 1923 EIEE-KENQDYTAFSQWQLKKFLSPIYQPEF----EDWMMIILDSMLKTKQSYLKLNSGT 1977

Query: 1741 SCTPSITVAAAENFESHIVQYVKGEISSYFTGKLLSIVRDAIHHMKKMNND-QHNSPGVM 1799
                 I     ++ E  +   + G  S  F+  L+  V+    + ++   D Q+ +  V+
Sbjct: 1978 QRPTQIVNVKKQDEEDSVENSLNG-FSHLFSKPLMKRVKKLFKNQQEFILDPQYEADYVI 2036

Query: 1800 QTAANIH-KVDAP-LEFIKHVCAAFALDQNVQHDVLVMRKNLLKYVRVREFAPEAEFRDP 1857
                  H  V  P LE +K +C    L ++   ++  +RK LLK   +REFA  AEF+DP
Sbjct: 2037 PVLPGSHLNVKNPLLELVKSLCHVMLLSKSTILEIRTLRKELLKIFELREFAKVAEFKDP 2096

Query: 1858 CPSFILPNVICSYCNDCRDLDLCRDMALLAQDWHCAMPQCGQPYDREVMENALLQIVRQR 1917
              S ++P+ +C YC    D+D C+  A     + C   +C + +++ +++  L+Q +R  
Sbjct: 2097 SLSLVVPDFLCEYCFFISDIDFCK--AAPESIFSCV--RCHKAFNQVLLQEHLIQKLRSD 2152

Query: 1918 ERLYHLQDLVCIRCNQVKAAHLAEQCACAGSFRCKEDASDFRSKMQIFLNIANRQGFQLL 1977
               Y +QDL C RC++VK  +++  C CAG++           K+ +F  +A   GF +L
Sbjct: 2153 IESYLIQDLRCSRCHKVKRDYMSAHCPCAGAWEGTLPRESIVQKLNVFKQVAKYYGFDIL 2212

Query: 1978 QECTS 1982
              C +
Sbjct: 2213 LSCIA 2217


>gi|409043779|gb|EKM53261.1| hypothetical protein PHACADRAFT_99155 [Phanerochaete carnosa
            HHB-10118-sp]
          Length = 2203

 Score = 1323 bits (3423), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 675/1431 (47%), Positives = 926/1431 (64%), Gaps = 111/1431 (7%)

Query: 24   EEELEAKLGYDLFSEGDKRLGWLLTFASSSLEDEDTRKVYSCIDLYFVSQDGSTFKSKYK 83
            ++E++ K+G+   SEG  + GWL+    + ++D +     + +D +F+  DG  F+   +
Sbjct: 43   QDEIDEKMGFARVSEGPTKEGWLINMHPTLVKDAEWPSGKAAVDFFFIQDDGGMFRCTLQ 102

Query: 84   FRPYFYAATKEKMEMDVEAYLRRRYESQIADIEILEKEDLDLKNHLSGLHKSYLKISFDT 143
            + PYFY A K  ME  +E +L ++YE  I  I   +KEDL + NHL G  + YL++ F  
Sbjct: 103  YEPYFYIACKSGMETVIEEWLLKKYEGVICRITRHKKEDLQMPNHLLGHRRLYLQLQFRN 162

Query: 144  VQQLMDVKKDLLHVVERNQAKFDAAEAY-------------------------ESILTGK 178
            V  L+ V+KD++ +   N AK DA +AY                         +S+ + +
Sbjct: 163  VSDLLAVRKDVMPLALANGAKLDAVDAYAEVVQATANEASMSIEVDSEWAMDVDSVASSR 222

Query: 179  REQRPQDFLDCIVDLREYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLLEKRVDLLQRAE 238
               + +D  + I+D+RE+DVPY++R A+DN++R G WY ++     P+ ++ V+ ++RA+
Sbjct: 223  PGGKDRDPREGIIDIREFDVPYYLRVAMDNEIRVGLWYAITFEGGQPIFKQLVERVKRAD 282

Query: 239  VHVCAFDIETTKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEF 298
              V A+DIETTK PLKFPD   D +MMISYM+DGQG+LI NRE V EDI+D EYTPK  +
Sbjct: 283  PVVMAYDIETTKAPLKFPDQAIDQVMMISYMVDGQGFLITNREIVSEDIDDFEYTPKEGY 342

Query: 299  EGYFKVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELG 358
            EG F V N  +E  ++R +F+H+QEVKP +  T+NGD+FD+PFL  RA  HG  M  E G
Sbjct: 343  EGPFVVFNEADEPSVIRRFFSHIQEVKPTVMATFNGDFFDFPFLYARAKVHGIDMFLETG 402

Query: 359  FQCDKNQGECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRF 418
            F  D  + E +++   H+DCF WVKRDSYLPQGSQGLKAVT AKLGY+P+E++PE M  +
Sbjct: 403  FVIDSEE-EYKSRTCAHMDCFRWVKRDSYLPQGSQGLKAVTTAKLGYNPIELDPELMTPY 461

Query: 419  AKEKPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMV 478
            A E+PQ++A YSVSDAVATYYLYM YVHPFIFSL  IIP+  DEVLRKGSGTLCE LLMV
Sbjct: 462  AMEQPQILAQYSVSDAVATYYLYMKYVHPFIFSLCNIIPLKADEVLRKGSGTLCETLLMV 521

Query: 479  QAYKANVICPNKHQSDPEKFYRNHLLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYE 538
            +A++ NVI PNKH+ +  K Y  HL+ +ETY+GGHVE LE+GVFRSD+ T FK++PSA +
Sbjct: 522  EAFRGNVIMPNKHEEEHGKMYEGHLVATETYVGGHVEALEAGVFRSDISTQFKIEPSAVQ 581

Query: 539  QLLNNLDRDLQYAIKVEGKMDLESVSNYDEVKNAIMEKLLRLQEEPIREECPLIYHLDVA 598
            QL++ LD  L + I  E K  LESV+NYDEVK  I  KL  +++ P+R + PLIYHLDVA
Sbjct: 582  QLIDQLDAALTFCIVEESKSSLESVTNYDEVKAQIQAKLEEMRDNPLRMDNPLIYHLDVA 641

Query: 599  AMYPNIILTNRLQPPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYYHLKK 658
            AMYPNI+L+NRLQP S+V + VC  CDFNRPGK C R++ W WRGE+F  +R ++  +K 
Sbjct: 642  AMYPNIMLSNRLQPDSVVDESVCAVCDFNRPGKVCDRRMTWAWRGELFPARRDEFNMIKH 701

Query: 659  QIESE-FVDGTNGHLSKSFLDLPKMEQQSRLKDRLKKYCQKAYKRVLDKPVTELREAGIC 717
             +  E F     G   + F DL   EQ + L  RL  Y +K YK+V D  V E R+A IC
Sbjct: 702  ALNQETFPPKKPGQPQRRFSDLAPAEQTALLHKRLGDYSRKVYKKVKDTKV-ENRQAIIC 760

Query: 718  MRENSFYVDTVRSFRDRRYEYKGLNKVWKGKLSEAKASGNSI-KIQEAQDMVVLYDSLQL 776
             REN FY+DTVR FRDRRYEYKGL+K WK  L    +   SI ++ EA+ M+VLYDSLQL
Sbjct: 761  QRENPFYIDTVRRFRDRRYEYKGLHKTWKKNLDTVLSESRSIAEVDEAKKMIVLYDSLQL 820

Query: 777  AHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWC 836
            AHKCILNSFYGYVMRKGARW+SMEMAG+   TGA IIQ AR L+E+IG+PLELDTDGIWC
Sbjct: 821  AHKCILNSFYGYVMRKGARWHSMEMAGITCLTGATIIQMARQLVEQIGRPLELDTDGIWC 880

Query: 837  VLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSEC 896
            +LPG FPENF FK ++  K +  SYPC MLN  V    TN QY  L DP +  Y+ HSE 
Sbjct: 881  MLPGVFPENFKFKLEN-GKAIAFSYPCTMLNHLVNAQFTNHQYHDL-DPETGDYKIHSEN 938

Query: 897  SIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQA 956
            SI FE+DGPYKAMILP+SKEE  L+KKRYAVFNDDG+LAELKGFE+KRRGEL+LIK+FQ+
Sbjct: 939  SIFFELDGPYKAMILPSSKEEDKLLKKRYAVFNDDGSLAELKGFEVKRRGELQLIKIFQS 998

Query: 957  ELFDKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLADYG 1016
            ++F+KFL G+T EECY+AVA +A+RWLD+L ++ + + D EL++ I+E+ +MS++LA+Y 
Sbjct: 999  QIFEKFLLGTTTEECYTAVAQIADRWLDVLFSKAESLGDDELVELIAENRSMSRTLAEYA 1058

Query: 1017 EQKSCAVTTARRLSDFLGDTMVKDKGLRCQYIVACEPQGTPVSERAVPVAIFETDAEIMK 1076
             QKS +++TA+RL++FLGD MVKDKGL C++I++ +P G PV+ERAVPVAIF  +  + +
Sbjct: 1059 GQKSTSISTAKRLAEFLGDQMVKDKGLACKFIISAKPLGAPVTERAVPVAIFSAEESVKR 1118

Query: 1077 FYLRKWCKTSS--DVGIRSIVDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDWL 1134
             YLRKW K +S  +  +RSI+DW YY +RL S IQK+ITIPAAMQKV+NPVPR+ HPDWL
Sbjct: 1119 AYLRKWLKDNSMTNFDLRSILDWGYYIERLGSVIQKLITIPAAMQKVANPVPRIRHPDWL 1178

Query: 1135 YKKVREKEDKFRQRKLVDIFSSLKKDDFLNKTCNAETNLMDENVEDLEDFPKKRRNSVNG 1194
            +++V  + DKF Q K+ + F  +  D                 +ED           + G
Sbjct: 1179 HRRVVAQGDKFHQHKMTEYFGKMTAD-----------------IED-----------IGG 1210

Query: 1195 PRPIVRCFEVNNEQKTVKTTDQVDSLRQQLEPSEVSDQQPSSQNAIDTENIDRIVDYKGW 1254
                    +  + +K +   ++  S R++         +P+S++ +    +   V+Y  W
Sbjct: 1211 T-------QSRDGRKRIAVVNRKPSRREETP-------EPASESQL--PKVKPEVNYSAW 1254

Query: 1255 LELKKRKWKDNLDRRKKQKLGSLRASHQANGVSESLGDMINHKEAQRRTGVGSYFRRQET 1314
            L   + +W     +R  +KLG        + V   +   +  K+  R             
Sbjct: 1255 LRGARVRWT----QRLAKKLG-----FNDDAVVPEMFKGVRVKDTGR------------- 1292

Query: 1315 AMTRCHWQIIQLVPSSQSGVFLAWVVVEGIMVRIPITVPRLFYLNSK-DPIVEKFPG--- 1370
                  W I+Q+      G F  W+  +  +V +P+ +PR FY++ +  P  + F     
Sbjct: 1293 ------WDIVQIRQMRTPGKFTLWLSTDTGLVSVPLRIPREFYVHLRITPKRDHFRTDMY 1346

Query: 1371 --RRVNKTLPHGRRSFNLIEVMIDEDQFRKESKKLAALLADPEVEVLGWQQ 1419
               +V +TLP  +   NL ++ + E+ F +E +    L  DP V+ +  QQ
Sbjct: 1347 SVEKVVRTLPRDQPCVNLYKLSVREETFLEEQEHFIHLTNDPSVDGVYEQQ 1397



 Score =  291 bits (746), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 191/621 (30%), Positives = 314/621 (50%), Gaps = 56/621 (9%)

Query: 1412 VEVLGWQQNAAKIGMQRCAASSQWFNERISLARY-----AHI------------------ 1448
            ++VL WQ  AA+  ++R      W +  I+LA Y      HI                  
Sbjct: 1589 LDVLPWQPAAAQKMIRRYLTMGAWLDRTIALADYYDVPVGHIDGDQPLLLADIEFARRLT 1648

Query: 1449 -----LWISDDGVPDLGGTSEEDECFADEVHQPVLTYPGAYRKVSVELKIHHLSVNALLK 1503
                 LW S    PDLGG  E+D    +E+ +     PG Y  V +E+ + +L+V+A+L 
Sbjct: 1649 AQDILLWWSPTDRPDLGGI-EDDRRPTEELPKTEFMSPGCYSNVCLEITVRNLAVDAVLH 1707

Query: 1504 SNQVNEMEG-GGLFGFDQDMNSGPYNNELCGFD----ETTSSAPAFRVVKQLIQRCLTDA 1558
            S  VNE+EG GG   FD   N   Y  +    D    E++ S   F +++ +++  L D 
Sbjct: 1708 SMIVNELEGSGGATAFDATKNLDQYTGDDTQKDLTLGESSVSPITFSILRGMVKTWLLDK 1767

Query: 1559 VTSGNVFADAIL--QHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEFRKLGATII 1616
            +  GN  + A L   H +RW+ S  S L++P LHR +H +M+K F  +LAEF++LG+ ++
Sbjct: 1768 I-RGNFESPASLAIDHFWRWISSNSSHLYEPSLHRFVHGLMRKTFIQILAEFKRLGSHVV 1826

Query: 1617 FANFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLFMDQYNYGG 1676
            +A+ S++++ T K     A AY   +  A+ + ELF+ + L    F+  L+FMD  N  G
Sbjct: 1827 YADLSRILLVTSK-PPGTAHAYATYITTAVTSHELFQHVYLHTERFYDFLIFMDPANLAG 1885

Query: 1677 IPARADESLDDDSQVDIVSSWNIAEYLPKEIQDHFVLVVSEFMYIPWKHAQKL-AASRAS 1735
            I      ++D   ++ +   WNI  +LP  +Q+ F   +  F+   +K  QK  A  RA 
Sbjct: 1886 IVCEDPLAVDPAEELCLEMRWNIQSFLPPALQEDFKKAIRYFLVEFFKVKQKSNAGGRAP 1945

Query: 1736 LQEGSSCTPSITVAAAENFESHIVQYVKGEISSYFTGKLLSIVRDAI--HHMKKMNND-- 1791
            L+   +  P  T   A   +    +  K  +      ++L +V + I  H    M+ +  
Sbjct: 1946 LRMIQNGPPGATQPDAGKTKEQ--EDSKEFVQRKLLRRMLKMVGNVIDQHRGAMMDEEIL 2003

Query: 1792 -QHNSPGVMQTAANIHKVDAPLEFIKHVCAAFALDQNVQHDVLVMRKNLLKYVRVREFAP 1850
             Q   P  +   +++H  +  LEF+K  CA FAL +  Q +V ++++NLL+ V VREF+ 
Sbjct: 2004 AQWQFP--VLPGSHLHMTNPVLEFVKFTCAIFALSKECQIEVGLLKRNLLELVGVREFSS 2061

Query: 1851 EAEFRDPCPSFILPNVICSYCNDCRDLDLCRDMALL------AQDWHCAMPQCGQPYDRE 1904
            EA F++PC    L NV C +C+  RD D CRD  L+      A  W C    C   YDR 
Sbjct: 2062 EAAFQNPCEPLKLSNVPCRHCDSLRDFDFCRDPELVELAGQGAPRWTCV--NCYGEYDRT 2119

Query: 1905 VMENALLQIVRQRERLYHLQDLVCIRCNQVKAAHLAEQCACAGSFRCKEDASDFRSKMQI 1964
            ++E AL+++V + ER +  QDL C +C Q+++ +++  C C+G+++     +D R +++ 
Sbjct: 2120 MIEFALIEMVWELERRFAQQDLRCTKCKQIQSDNVSRFCQCSGNYQLTISKADVRRRLRT 2179

Query: 1965 FLNIANRQGFQLLQECTSWIL 1985
             +N+A    F  L+EC   +L
Sbjct: 2180 MVNVALVHKFPKLRECAESLL 2200


>gi|1045247|emb|CAA63235.1| POL2 [Saccharomyces cerevisiae]
          Length = 2221

 Score = 1322 bits (3422), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 683/1409 (48%), Positives = 912/1409 (64%), Gaps = 98/1409 (6%)

Query: 42   RLGWLLTFASSSLEDED------------------TRKVYSCIDLYFVSQDGSTFKSKYK 83
            R+GWL    ++ +  E                   T +  S +D YF+ ++G +FKS   
Sbjct: 75   RVGWLTNMHATLVSQETLSSGSNGGGNSNDGERVTTNQGISGVDFYFLDEEGGSFKSTVV 134

Query: 84   FRPYFYAATKEKMEM-DVEAYLRRRYESQIADIEILEKEDLDLKNHLSGLHKSYLKISFD 142
            + PYF+ A  ++  + DVE  +++  ES +  ++I+ KEDL + NHL GL K+ +K+SF 
Sbjct: 135  YDPYFFIACNDESRVNDVEELVKKYLESCLKSLQIIRKEDLTMDNHLLGLQKTLIKLSFV 194

Query: 143  TVQQLMDVKKDLLHVVERNQAKFDAAEAYESILTGKREQRPQDFLDCIVDLREYDVPYHI 202
               QL + +K L  +++ N         Y     G  +    D    I D+REYDVPYH+
Sbjct: 195  NSNQLFEARKLLRPILQDNANNNVQRNIYNVAANGSEKV---DAKHLIEDIREYDVPYHV 251

Query: 203  RFAIDNDVRCGQWYDVSISSTGPLLEKRVDLLQRAEVHVCAFDIETTKLPLKFPDADYDI 262
            R +ID D+R G+WY V+    G + + R   +  A+  V AFDIETTK PLKFPD+  D 
Sbjct: 252  RVSIDKDIRVGKWYKVT--QQGFIEDTRK--IAFADPVVMAFDIETTKPPLKFPDSAVDQ 307

Query: 263  IMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNVNNEIELLRLWFAHMQ 322
            IMMISYM+DG+G+LI NRE + EDIED EYTPKPE+ G+F + N N+E+ LL+ +F H++
Sbjct: 308  IMMISYMIDGEGFLITNREIISEDIEDFEYTPKPEYPGFFTIFNENDEVALLQRFFEHIR 367

Query: 323  EVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDKNQGECRAKFACHLDCFAWV 382
            +V+P +  T+NGD+FDWPF+  R+  HG  M +E+GF  D  +GE ++ +  H+DCF WV
Sbjct: 368  DVRPTVISTFNGDFFDWPFIHNRSKIHGLDMFDEIGFAPDA-EGEYKSSYCSHMDCFRWV 426

Query: 383  KRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQMMASYSVSDAVATYYLYM 442
            KRDSYLPQGSQGLKAVT++KLGY+P+E++PE M  +A EKPQ ++ YSVSDAVATYYLYM
Sbjct: 427  KRDSYLPQGSQGLKAVTQSKLGYNPIELDPELMTPYAFEKPQHLSEYSVSDAVATYYLYM 486

Query: 443  TYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVICPNKHQSDPEKFYRNH 502
             YVHPFIFSL TIIP++PDE LRKG+GTLCEMLLMVQAY+ N++ PNKH    E+FY  H
Sbjct: 487  KYVHPFIFSLCTIIPLNPDETLRKGTGTLCEMLLMVQAYQHNILLPNKHTDPIERFYDGH 546

Query: 503  LLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQLLNNLDRDLQYAIKVEGKMDLES 562
            LLESETY+GGHVE LE+GVFRSDL   FK+DPSA ++LL  L   L+++++VE K  ++ 
Sbjct: 547  LLESETYVGGHVESLEAGVFRSDLKNEFKIDPSAIDELLQELPEALKFSVEVENKSSVDK 606

Query: 563  VSNYDEVKNAIMEKLLRLQEEPIREECPLIYHLDVAAMYPNIILTNRLQPPSIVTDEVCT 622
            V+N++E+KN I +KLL L+E  IR E PLIYH+DVA+MYPNI+ TNRLQP SI  +  C 
Sbjct: 607  VTNFEEIKNQITQKLLELKENNIRNELPLIYHVDVASMYPNIMTTNRLQPDSIKAERDCA 666

Query: 623  ACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYYHLKKQIESEFVDGTNGHLSK---SFLDL 679
            +CDFNRPGKTC RKL+W WRGE F  K  +Y  +K+ +++E     N    K   +F +L
Sbjct: 667  SCDFNRPGKTCARKLKWAWRGEFFPSKMDEYNMIKRALQNETFPNKNKFSKKKVLTFDEL 726

Query: 680  PKMEQQSRLKDRLKKYCQKAYKRVLDKPVTELREAGICMRENSFYVDTVRSFRDRRYEYK 739
               +Q   +K RL +Y +K Y RV    + E REA +C REN FYVDTV+SFRDRRYE+K
Sbjct: 727  SYADQVIHIKKRLTEYSRKVYHRVKVSEIVE-REAIVCQRENPFYVDTVKSFRDRRYEFK 785

Query: 740  GLNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHKCILNSFYGYVMRKGARWYSM 799
            GL K WKG LS+   S    +  EA+ M+VLYDSLQLAHK ILNSFYGYVMRKG+RWYSM
Sbjct: 786  GLAKTWKGNLSKIDPSDKHAR-DEAKKMIVLYDSLQLAHKVILNSFYGYVMRKGSRWYSM 844

Query: 800  EMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLPGSFPENFTFKTKDLKKKLTI 859
            EMAG+   TGA IIQ AR L+E++G+PLELDTDGIWC+LP SFPE + F T +  KKL +
Sbjct: 845  EMAGITCLTGATIIQMARALVERVGRPLELDTDGIWCILPKSFPETYFF-TLENGKKLYL 903

Query: 860  SYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEFEVDGPYKAMILPASKEEGI 919
            SYPC MLN  V +  TN QYQ L DP++  YETHSE +I FEVDGPYKAMILP+SKEEG 
Sbjct: 904  SYPCSMLNYRVHQKFTNHQYQELKDPLNYIYETHSENTIFFEVDGPYKAMILPSSKEEGK 963

Query: 920  LIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFLHGSTIEECYSAVAAVA 979
             IKKRYAVFN+DG+LAELKGFE+KRRGEL+LIK FQ+++F  FL G T+E CYSAVA+V 
Sbjct: 964  GIKKRYAVFNEDGSLAELKGFELKRRGELQLIKNFQSDIFKVFLEGDTLEGCYSAVASVC 1023

Query: 980  NRWLDLLDNQGKDIADSELIDYISESSTMSKSLADYGEQKSCAVTTARRLSDFLGDTMVK 1039
            NRWLD+LD+ G  + D +L+  I E+ +MSK+L +Y  QKS ++TTARRL DFLG+ MVK
Sbjct: 1024 NRWLDVLDSHGLMLEDEDLVSLICENRSMSKTLKEYEGQKSTSITTARRLGDFLGEDMVK 1083

Query: 1040 DKGLRCQYIVACEPQGTPVSERAVPVAIFETDAEIMKFYLRKWCKTSS--DVGIRSIVDW 1097
            DKGL+C+YI++ +P   PV+ERA+PVAIF  D  I + +LR+W    S  D+ IR+I+DW
Sbjct: 1084 DKGLQCKYIISSKPFNAPVTERAIPVAIFSADIPIKRSFLRRWTLDPSLEDLDIRTIIDW 1143

Query: 1098 SYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLYKKVREKEDKFRQRKLVDIFSSL 1157
             YY++RL SAIQKIITIPAA+Q VSNPVPRV HPDWL +K+  KEDKF+Q  L   FS  
Sbjct: 1144 GYYRERLGSAIQKIITIPAALQGVSNPVPRVEHPDWLKRKIATKEDKFKQTSLTKFFSKT 1203

Query: 1158 KKDDFLNKTCNAETNLMDENVEDLEDFPKKRRNSVNGPRPIVRCFEVNNEQKTVKTTDQV 1217
            K    + K            ++D+ED  +      N    I R         T K     
Sbjct: 1204 KNVPTMGK------------IKDIEDLFEPTVEEDNAKIKIAR---------TTKKKAVS 1242

Query: 1218 DSLRQQLEPSEVSDQQPSSQNAIDTENIDRIVDYKGWLELKKRKWK-DNLDRRKKQKLGS 1276
               R QL   E     PS   ++D        DY GWL  +K KWK    DR+++ +L  
Sbjct: 1243 KRKRNQLTNEEDPLVLPSEIPSMDE-------DYVGWLNYQKIKWKIQARDRKRRDQLFG 1295

Query: 1277 LRASHQANGVSESLGDMINHKEAQRRTGVGSYFRRQETAMTRCHWQIIQLVPSSQSGVFL 1336
                              N   ++ R+ +GS  R+Q  +     W+++Q   S + GV  
Sbjct: 1296 ------------------NTNSSRERSALGSMIRKQAESYANSTWEVLQYKDSGEPGVLE 1337

Query: 1337 AWVVVEGIMVRIPITVPRLFYLNSKDPIVEKFPGRRV--------NKTLPHGRRSFN--- 1385
             +V + G +  I   +P+  Y+  K    +  P +++        + +LP+  ++ N   
Sbjct: 1338 VFVTINGKVQNITFHIPKTIYMKFKS---QTMPLQKIKNCLIEKSSASLPNNPKTSNPAG 1394

Query: 1386 --LIEVMIDEDQFRKESKKLAALLADPEV 1412
              L ++ + E  F +E +   ++  D  V
Sbjct: 1395 GQLFKITLPESVFLEEKENCTSIFNDENV 1423



 Score =  216 bits (550), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 150/605 (24%), Positives = 279/605 (46%), Gaps = 48/605 (7%)

Query: 1415 LGWQQNAAKIGMQRCAASSQWFNERISLARYAHI-------------------------- 1448
            L WQ    K  +    +S  W +  I L++Y++I                          
Sbjct: 1625 LNWQPTLLKKLVNHVLSSGSWISHLIKLSQYSNIPICNLRLDSMDYIIDVLYARKLKKEN 1684

Query: 1449 --LWISDDG-VPDLGGTSEEDEC----FADEVHQPVLTYPGAYRKVSVELKIHHLSVNAL 1501
              LW ++   +PD GG   + +       ++   P +   G Y  V +++ + +L+VN +
Sbjct: 1685 IVLWWNEKAPLPDHGGIQNDFDLNTSWIMNDSEFPKINNSGVYDNVVLDVGVDNLTVNTI 1744

Query: 1502 LKSNQVNEMEGGGLFGFDQDMN-SGPYNNELCGFDETTSSAPAFRVVKQLIQRCLTDAVT 1560
            L S  +N+ EG  L   +  ++      N    F     S  A  V++ +++    +A+ 
Sbjct: 1745 LTSALINDAEGSDLVNNNMGIDDKDAVINSPSEFVHDAFSNDALNVLRGMLKEWWDEALK 1804

Query: 1561 SGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEFRKLGATIIFANF 1620
              N  AD ++  L  W+ +P++KL D +L   +H + +K    L+ EF  LG+TI++A+ 
Sbjct: 1805 E-NSTADLLVNSLASWVQNPNAKLFDGLLRYHVHNLTKKALLQLVNEFSALGSTIVYADR 1863

Query: 1621 SKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLFMDQYNYGGIPAR 1680
            ++++I T K+      AY   ++KA++T  +F +++L    +W  L++MD++N+ G+   
Sbjct: 1864 NQILIKTNKYSPENCYAYSQYMMKAVRTNPMFSYLDLNIKRYWDLLIWMDKFNFSGLACI 1923

Query: 1681 ADESLDDDSQVDIVSSWNIAEYLPKEIQDHFVLVVSEFMYIPWKHAQKLAASRASLQEGS 1740
              E   ++     VS W + ++L    Q  F     ++M I      K   S   L  G+
Sbjct: 1924 EIEE-KENQDYTAVSQWQLKKFLSPIYQPEF----EDWMMIILDSMLKTKQSYLKLNSGT 1978

Query: 1741 SCTPSITVAAAENFESHIVQYVKGEISSYFTGKLLSIVRDAIHHMKKMNND-QHNSPGVM 1799
                 I     ++ E  +   + G  S  F+  L+  V+    + ++   D Q+ +  V+
Sbjct: 1979 QRPTQIVNVKKQDKEDSVENSLNG-FSHLFSKPLMKRVKKLFKNQQEFILDPQYEADYVI 2037

Query: 1800 QTAANIH-KVDAP-LEFIKHVCAAFALDQNVQHDVLVMRKNLLKYVRVREFAPEAEFRDP 1857
                  H  V  P LE +K +C    L ++   ++  +RK LLK   +REFA  AEF+DP
Sbjct: 2038 PVLPGSHLNVKNPLLELVKSLCHVMLLSKSTILEIRTLRKELLKIFELREFAKVAEFKDP 2097

Query: 1858 CPSFILPNVICSYCNDCRDLDLCRDMALLAQDWHCAMPQCGQPYDREVMENALLQIVRQR 1917
              S ++P+ +C YC    D+D C+  A     + C   +C + +++ +++  L+Q +R  
Sbjct: 2098 SLSLVVPDFLCEYCFFISDIDFCK--AAPESIFSCV--RCHKAFNQVLLQEHLIQKLRSD 2153

Query: 1918 ERLYHLQDLVCIRCNQVKAAHLAEQCACAGSFRCKEDASDFRSKMQIFLNIANRQGFQLL 1977
               Y +QDL C RC++VK  +++  C CAG++           K+ +F  +A   GF +L
Sbjct: 2154 IESYLIQDLRCSRCHKVKRDYMSAHCPCAGAWEGTLPRESIVQKLNVFKQVAKYYGFDIL 2213

Query: 1978 QECTS 1982
              C +
Sbjct: 2214 LSCIA 2218


>gi|6324067|ref|NP_014137.1| Pol2p [Saccharomyces cerevisiae S288c]
 gi|118841|sp|P21951.1|DPOE_YEAST RecName: Full=DNA polymerase epsilon catalytic subunit A; AltName:
            Full=DNA polymerase II subunit A
 gi|171409|gb|AAA88711.1| DNA polymerase II [Saccharomyces cerevisiae]
 gi|1302317|emb|CAA96169.1| POL2 [Saccharomyces cerevisiae]
 gi|285814403|tpg|DAA10297.1| TPA: Pol2p [Saccharomyces cerevisiae S288c]
          Length = 2222

 Score = 1322 bits (3421), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 683/1409 (48%), Positives = 912/1409 (64%), Gaps = 98/1409 (6%)

Query: 42   RLGWLLTFASSSLEDED------------------TRKVYSCIDLYFVSQDGSTFKSKYK 83
            R+GWL    ++ +  E                   T +  S +D YF+ ++G +FKS   
Sbjct: 75   RVGWLTNMHATLVSQETLSSGSNGGGNSNDGERVTTNQGISGVDFYFLDEEGGSFKSTVV 134

Query: 84   FRPYFYAATKEKMEM-DVEAYLRRRYESQIADIEILEKEDLDLKNHLSGLHKSYLKISFD 142
            + PYF+ A  ++  + DVE  +++  ES +  ++I+ KEDL + NHL GL K+ +K+SF 
Sbjct: 135  YDPYFFIACNDESRVNDVEELVKKYLESCLKSLQIIRKEDLTMDNHLLGLQKTLIKLSFV 194

Query: 143  TVQQLMDVKKDLLHVVERNQAKFDAAEAYESILTGKREQRPQDFLDCIVDLREYDVPYHI 202
               QL + +K L  +++ N         Y     G  +    D    I D+REYDVPYH+
Sbjct: 195  NSNQLFEARKLLRPILQDNANNNVQRNIYNVAANGSEKV---DAKHLIEDIREYDVPYHV 251

Query: 203  RFAIDNDVRCGQWYDVSISSTGPLLEKRVDLLQRAEVHVCAFDIETTKLPLKFPDADYDI 262
            R +ID D+R G+WY V+    G + + R   +  A+  V AFDIETTK PLKFPD+  D 
Sbjct: 252  RVSIDKDIRVGKWYKVT--QQGFIEDTRK--IAFADPVVMAFDIETTKPPLKFPDSAVDQ 307

Query: 263  IMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNVNNEIELLRLWFAHMQ 322
            IMMISYM+DG+G+LI NRE + EDIED EYTPKPE+ G+F + N N+E+ LL+ +F H++
Sbjct: 308  IMMISYMIDGEGFLITNREIISEDIEDFEYTPKPEYPGFFTIFNENDEVALLQRFFEHIR 367

Query: 323  EVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDKNQGECRAKFACHLDCFAWV 382
            +V+P +  T+NGD+FDWPF+  R+  HG  M +E+GF  D  +GE ++ +  H+DCF WV
Sbjct: 368  DVRPTVISTFNGDFFDWPFIHNRSKIHGLDMFDEIGFAPDA-EGEYKSSYCSHMDCFRWV 426

Query: 383  KRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQMMASYSVSDAVATYYLYM 442
            KRDSYLPQGSQGLKAVT++KLGY+P+E++PE M  +A EKPQ ++ YSVSDAVATYYLYM
Sbjct: 427  KRDSYLPQGSQGLKAVTQSKLGYNPIELDPELMTPYAFEKPQHLSEYSVSDAVATYYLYM 486

Query: 443  TYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVICPNKHQSDPEKFYRNH 502
             YVHPFIFSL TIIP++PDE LRKG+GTLCEMLLMVQAY+ N++ PNKH    E+FY  H
Sbjct: 487  KYVHPFIFSLCTIIPLNPDETLRKGTGTLCEMLLMVQAYQHNILLPNKHTDPIERFYDGH 546

Query: 503  LLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQLLNNLDRDLQYAIKVEGKMDLES 562
            LLESETY+GGHVE LE+GVFRSDL   FK+DPSA ++LL  L   L+++++VE K  ++ 
Sbjct: 547  LLESETYVGGHVESLEAGVFRSDLKNEFKIDPSAIDELLQELPEALKFSVEVENKSSVDK 606

Query: 563  VSNYDEVKNAIMEKLLRLQEEPIREECPLIYHLDVAAMYPNIILTNRLQPPSIVTDEVCT 622
            V+N++E+KN I +KLL L+E  IR E PLIYH+DVA+MYPNI+ TNRLQP SI  +  C 
Sbjct: 607  VTNFEEIKNQITQKLLELKENNIRNELPLIYHVDVASMYPNIMTTNRLQPDSIKAERDCA 666

Query: 623  ACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYYHLKKQIESEFVDGTNGHLSK---SFLDL 679
            +CDFNRPGKTC RKL+W WRGE F  K  +Y  +K+ +++E     N    K   +F +L
Sbjct: 667  SCDFNRPGKTCARKLKWAWRGEFFPSKMDEYNMIKRALQNETFPNKNKFSKKKVLTFDEL 726

Query: 680  PKMEQQSRLKDRLKKYCQKAYKRVLDKPVTELREAGICMRENSFYVDTVRSFRDRRYEYK 739
               +Q   +K RL +Y +K Y RV    + E REA +C REN FYVDTV+SFRDRRYE+K
Sbjct: 727  SYADQVIHIKKRLTEYSRKVYHRVKVSEIVE-REAIVCQRENPFYVDTVKSFRDRRYEFK 785

Query: 740  GLNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHKCILNSFYGYVMRKGARWYSM 799
            GL K WKG LS+   S    +  EA+ M+VLYDSLQLAHK ILNSFYGYVMRKG+RWYSM
Sbjct: 786  GLAKTWKGNLSKIDPSDKHAR-DEAKKMIVLYDSLQLAHKVILNSFYGYVMRKGSRWYSM 844

Query: 800  EMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLPGSFPENFTFKTKDLKKKLTI 859
            EMAG+   TGA IIQ AR L+E++G+PLELDTDGIWC+LP SFPE + F T +  KKL +
Sbjct: 845  EMAGITCLTGATIIQMARALVERVGRPLELDTDGIWCILPKSFPETYFF-TLENGKKLYL 903

Query: 860  SYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEFEVDGPYKAMILPASKEEGI 919
            SYPC MLN  V +  TN QYQ L DP++  YETHSE +I FEVDGPYKAMILP+SKEEG 
Sbjct: 904  SYPCSMLNYRVHQKFTNHQYQELKDPLNYIYETHSENTIFFEVDGPYKAMILPSSKEEGK 963

Query: 920  LIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFLHGSTIEECYSAVAAVA 979
             IKKRYAVFN+DG+LAELKGFE+KRRGEL+LIK FQ+++F  FL G T+E CYSAVA+V 
Sbjct: 964  GIKKRYAVFNEDGSLAELKGFELKRRGELQLIKNFQSDIFKVFLEGDTLEGCYSAVASVC 1023

Query: 980  NRWLDLLDNQGKDIADSELIDYISESSTMSKSLADYGEQKSCAVTTARRLSDFLGDTMVK 1039
            NRWLD+LD+ G  + D +L+  I E+ +MSK+L +Y  QKS ++TTARRL DFLG+ MVK
Sbjct: 1024 NRWLDVLDSHGLMLEDEDLVSLICENRSMSKTLKEYEGQKSTSITTARRLGDFLGEDMVK 1083

Query: 1040 DKGLRCQYIVACEPQGTPVSERAVPVAIFETDAEIMKFYLRKWCKTSS--DVGIRSIVDW 1097
            DKGL+C+YI++ +P   PV+ERA+PVAIF  D  I + +LR+W    S  D+ IR+I+DW
Sbjct: 1084 DKGLQCKYIISSKPFNAPVTERAIPVAIFSADIPIKRSFLRRWTLDPSLEDLDIRTIIDW 1143

Query: 1098 SYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLYKKVREKEDKFRQRKLVDIFSSL 1157
             YY++RL SAIQKIITIPAA+Q VSNPVPRV HPDWL +K+  KEDKF+Q  L   FS  
Sbjct: 1144 GYYRERLGSAIQKIITIPAALQGVSNPVPRVEHPDWLKRKIATKEDKFKQTSLTKFFSKT 1203

Query: 1158 KKDDFLNKTCNAETNLMDENVEDLEDFPKKRRNSVNGPRPIVRCFEVNNEQKTVKTTDQV 1217
            K    + K            ++D+ED  +      N    I R         T K     
Sbjct: 1204 KNVPTMGK------------IKDIEDLFEPTVEEDNAKIKIAR---------TTKKKAVS 1242

Query: 1218 DSLRQQLEPSEVSDQQPSSQNAIDTENIDRIVDYKGWLELKKRKWK-DNLDRRKKQKLGS 1276
               R QL   E     PS   ++D        DY GWL  +K KWK    DR+++ +L  
Sbjct: 1243 KRKRNQLTNEEDPLVLPSEIPSMDE-------DYVGWLNYQKIKWKIQARDRKRRDQLFG 1295

Query: 1277 LRASHQANGVSESLGDMINHKEAQRRTGVGSYFRRQETAMTRCHWQIIQLVPSSQSGVFL 1336
                              N   ++ R+ +GS  R+Q  +     W+++Q   S + GV  
Sbjct: 1296 ------------------NTNSSRERSALGSMIRKQAESYANSTWEVLQYKDSGEPGVLE 1337

Query: 1337 AWVVVEGIMVRIPITVPRLFYLNSKDPIVEKFPGRRV--------NKTLPHGRRSFN--- 1385
             +V + G +  I   +P+  Y+  K    +  P +++        + +LP+  ++ N   
Sbjct: 1338 VFVTINGKVQNITFHIPKTIYMKFKS---QTMPLQKIKNCLIEKSSASLPNNPKTSNPAG 1394

Query: 1386 --LIEVMIDEDQFRKESKKLAALLADPEV 1412
              L ++ + E  F +E +   ++  D  V
Sbjct: 1395 GQLFKITLPESVFLEEKENCTSIFNDENV 1423



 Score =  216 bits (550), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 150/605 (24%), Positives = 279/605 (46%), Gaps = 48/605 (7%)

Query: 1415 LGWQQNAAKIGMQRCAASSQWFNERISLARYAHI-------------------------- 1448
            L WQ    K  +    +S  W +  I L++Y++I                          
Sbjct: 1625 LNWQPTLLKKLVNHVLSSGSWISHLIKLSQYSNIPICNLRLDSMDYIIDVLYARKLKKEN 1684

Query: 1449 --LWISDDG-VPDLGGTSEEDEC----FADEVHQPVLTYPGAYRKVSVELKIHHLSVNAL 1501
              LW ++   +PD GG   + +       ++   P +   G Y  V +++ + +L+VN +
Sbjct: 1685 IVLWWNEKAPLPDHGGIQNDFDLNTSWIMNDSEFPKINNSGVYDNVVLDVGVDNLTVNTI 1744

Query: 1502 LKSNQVNEMEGGGLFGFDQDMN-SGPYNNELCGFDETTSSAPAFRVVKQLIQRCLTDAVT 1560
            L S  +N+ EG  L   +  ++      N    F     S  A  V++ +++    +A+ 
Sbjct: 1745 LTSALINDAEGSDLVNNNMGIDDKDAVINSPSEFVHDAFSNDALNVLRGMLKEWWDEALK 1804

Query: 1561 SGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEFRKLGATIIFANF 1620
              N  AD ++  L  W+ +P++KL D +L   +H + +K    L+ EF  LG+TI++A+ 
Sbjct: 1805 E-NSTADLLVNSLASWVQNPNAKLFDGLLRYHVHNLTKKALLQLVNEFSALGSTIVYADR 1863

Query: 1621 SKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLFMDQYNYGGIPAR 1680
            ++++I T K+      AY   ++KA++T  +F +++L    +W  L++MD++N+ G+   
Sbjct: 1864 NQILIKTNKYSPENCYAYSQYMMKAVRTNPMFSYLDLNIKRYWDLLIWMDKFNFSGLACI 1923

Query: 1681 ADESLDDDSQVDIVSSWNIAEYLPKEIQDHFVLVVSEFMYIPWKHAQKLAASRASLQEGS 1740
              E   ++     VS W + ++L    Q  F     ++M I      K   S   L  G+
Sbjct: 1924 EIEE-KENQDYTAVSQWQLKKFLSPIYQPEF----EDWMMIILDSMLKTKQSYLKLNSGT 1978

Query: 1741 SCTPSITVAAAENFESHIVQYVKGEISSYFTGKLLSIVRDAIHHMKKMNND-QHNSPGVM 1799
                 I     ++ E  +   + G  S  F+  L+  V+    + ++   D Q+ +  V+
Sbjct: 1979 QRPTQIVNVKKQDKEDSVENSLNG-FSHLFSKPLMKRVKKLFKNQQEFILDPQYEADYVI 2037

Query: 1800 QTAANIH-KVDAP-LEFIKHVCAAFALDQNVQHDVLVMRKNLLKYVRVREFAPEAEFRDP 1857
                  H  V  P LE +K +C    L ++   ++  +RK LLK   +REFA  AEF+DP
Sbjct: 2038 PVLPGSHLNVKNPLLELVKSLCHVMLLSKSTILEIRTLRKELLKIFELREFAKVAEFKDP 2097

Query: 1858 CPSFILPNVICSYCNDCRDLDLCRDMALLAQDWHCAMPQCGQPYDREVMENALLQIVRQR 1917
              S ++P+ +C YC    D+D C+  A     + C   +C + +++ +++  L+Q +R  
Sbjct: 2098 SLSLVVPDFLCEYCFFISDIDFCK--AAPESIFSCV--RCHKAFNQVLLQEHLIQKLRSD 2153

Query: 1918 ERLYHLQDLVCIRCNQVKAAHLAEQCACAGSFRCKEDASDFRSKMQIFLNIANRQGFQLL 1977
               Y +QDL C RC++VK  +++  C CAG++           K+ +F  +A   GF +L
Sbjct: 2154 IESYLIQDLRCSRCHKVKRDYMSAHCPCAGAWEGTLPRESIVQKLNVFKQVAKYYGFDIL 2213

Query: 1978 QECTS 1982
              C +
Sbjct: 2214 LSCIA 2218


>gi|151944285|gb|EDN62563.1| DNA polymerase II [Saccharomyces cerevisiae YJM789]
          Length = 2222

 Score = 1322 bits (3421), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 683/1409 (48%), Positives = 912/1409 (64%), Gaps = 98/1409 (6%)

Query: 42   RLGWLLTFASSSLEDED------------------TRKVYSCIDLYFVSQDGSTFKSKYK 83
            R+GWL    ++ +  E                   T +  S +D YF+ ++G +FKS   
Sbjct: 75   RVGWLTNMHATLVSQETLSSGSNGGGNSNDGERVTTNQGISGVDFYFLDEEGGSFKSTVV 134

Query: 84   FRPYFYAATKEKMEM-DVEAYLRRRYESQIADIEILEKEDLDLKNHLSGLHKSYLKISFD 142
            + PYF+ A  ++  + DVE  +++  ES +  ++I+ KEDL + NHL GL K+ +K+SF 
Sbjct: 135  YDPYFFIACNDESRVNDVEELVKKYLESCLKSLQIIRKEDLTMDNHLLGLQKTLIKLSFV 194

Query: 143  TVQQLMDVKKDLLHVVERNQAKFDAAEAYESILTGKREQRPQDFLDCIVDLREYDVPYHI 202
               QL + +K L  +++ N         Y     G  +    D    I D+REYDVPYH+
Sbjct: 195  NSNQLFEARKLLRPILQDNANNNVQRNIYNVAANGSEKI---DAKHLIEDIREYDVPYHV 251

Query: 203  RFAIDNDVRCGQWYDVSISSTGPLLEKRVDLLQRAEVHVCAFDIETTKLPLKFPDADYDI 262
            R +ID D+R G+WY V+    G + + R   +  A+  V AFDIETTK PLKFPD+  D 
Sbjct: 252  RVSIDKDIRVGKWYKVT--QQGFIEDTRK--IAFADPVVMAFDIETTKPPLKFPDSAVDQ 307

Query: 263  IMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNVNNEIELLRLWFAHMQ 322
            IMMISYM+DG+G+LI NRE + EDIED EYTPKPE+ G+F + N N+E+ LL+ +F H++
Sbjct: 308  IMMISYMIDGEGFLITNREIISEDIEDFEYTPKPEYPGFFTIFNENDEVALLQRFFEHIR 367

Query: 323  EVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDKNQGECRAKFACHLDCFAWV 382
            +V+P +  T+NGD+FDWPF+  R+  HG  M +E+GF  D  +GE ++ +  H+DCF WV
Sbjct: 368  DVRPTVISTFNGDFFDWPFIHNRSKIHGLDMFDEIGFAPDA-EGEYKSSYCSHMDCFRWV 426

Query: 383  KRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQMMASYSVSDAVATYYLYM 442
            KRDSYLPQGSQGLKAVT++KLGY+P+E++PE M  +A EKPQ ++ YSVSDAVATYYLYM
Sbjct: 427  KRDSYLPQGSQGLKAVTQSKLGYNPIELDPELMTPYAFEKPQHLSEYSVSDAVATYYLYM 486

Query: 443  TYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVICPNKHQSDPEKFYRNH 502
             YVHPFIFSL TIIP++PDE LRKG+GTLCEMLLMVQAY+ N++ PNKH    E+FY  H
Sbjct: 487  KYVHPFIFSLCTIIPLNPDETLRKGTGTLCEMLLMVQAYQHNILLPNKHTDPIERFYDGH 546

Query: 503  LLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQLLNNLDRDLQYAIKVEGKMDLES 562
            LLESETY+GGHVE LE+GVFRSDL   FK+DPSA ++LL  L   L+++++VE K  ++ 
Sbjct: 547  LLESETYVGGHVESLEAGVFRSDLKNEFKIDPSAIDELLQELPEALKFSVEVENKSSVDK 606

Query: 563  VSNYDEVKNAIMEKLLRLQEEPIREECPLIYHLDVAAMYPNIILTNRLQPPSIVTDEVCT 622
            V+N++E+KN I +KLL L+E  IR E PLIYH+DVA+MYPNI+ TNRLQP SI  +  C 
Sbjct: 607  VTNFEEIKNQITQKLLELKENNIRNELPLIYHVDVASMYPNIMTTNRLQPDSIKAERDCA 666

Query: 623  ACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYYHLKKQIESEFVDGTNGHLSK---SFLDL 679
            +CDFNRPGKTC RKL+W WRGE F  K  +Y  +K+ +++E     N    K   +F +L
Sbjct: 667  SCDFNRPGKTCARKLKWAWRGEFFPSKMDEYNMIKRALQNETFPNKNKFSKKKVLTFDEL 726

Query: 680  PKMEQQSRLKDRLKKYCQKAYKRVLDKPVTELREAGICMRENSFYVDTVRSFRDRRYEYK 739
               +Q   +K RL +Y +K Y RV    + E REA +C REN FYVDTV+SFRDRRYE+K
Sbjct: 727  SYADQVIHIKKRLTEYSRKVYHRVKVSEIVE-REAIVCQRENPFYVDTVKSFRDRRYEFK 785

Query: 740  GLNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHKCILNSFYGYVMRKGARWYSM 799
            GL K WKG LS+   S    +  EA+ M+VLYDSLQLAHK ILNSFYGYVMRKG+RWYSM
Sbjct: 786  GLAKTWKGNLSKIDPSDKHAR-DEAKKMIVLYDSLQLAHKVILNSFYGYVMRKGSRWYSM 844

Query: 800  EMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLPGSFPENFTFKTKDLKKKLTI 859
            EMAG+   TGA IIQ AR L+E++G+PLELDTDGIWC+LP SFPE + F T +  KKL +
Sbjct: 845  EMAGITCLTGATIIQMARALVERVGRPLELDTDGIWCILPKSFPETYFF-TLENGKKLYL 903

Query: 860  SYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEFEVDGPYKAMILPASKEEGI 919
            SYPC MLN  V +  TN QYQ L DP++  YETHSE +I FEVDGPYKAMILP+SKEEG 
Sbjct: 904  SYPCSMLNYRVHQKFTNHQYQELKDPLNYIYETHSENTIFFEVDGPYKAMILPSSKEEGK 963

Query: 920  LIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFLHGSTIEECYSAVAAVA 979
             IKKRYAVFN+DG+LAELKGFE+KRRGEL+LIK FQ+++F  FL G T+E CYSAVA+V 
Sbjct: 964  GIKKRYAVFNEDGSLAELKGFELKRRGELQLIKNFQSDIFKVFLEGDTLEGCYSAVASVC 1023

Query: 980  NRWLDLLDNQGKDIADSELIDYISESSTMSKSLADYGEQKSCAVTTARRLSDFLGDTMVK 1039
            NRWLD+LD+ G  + D +L+  I E+ +MSK+L +Y  QKS ++TTARRL DFLG+ MVK
Sbjct: 1024 NRWLDVLDSHGLMLEDEDLVSLICENRSMSKTLKEYEGQKSTSITTARRLGDFLGEDMVK 1083

Query: 1040 DKGLRCQYIVACEPQGTPVSERAVPVAIFETDAEIMKFYLRKWCKTSS--DVGIRSIVDW 1097
            DKGL+C+YI++ +P   PV+ERA+PVAIF  D  I + +LR+W    S  D+ IR+I+DW
Sbjct: 1084 DKGLQCKYIISSKPFNAPVTERAIPVAIFSADIPIKRSFLRRWTLDPSLEDLDIRTIIDW 1143

Query: 1098 SYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLYKKVREKEDKFRQRKLVDIFSSL 1157
             YY++RL SAIQKIITIPAA+Q VSNPVPRV HPDWL +K+  KEDKF+Q  L   FS  
Sbjct: 1144 GYYRERLGSAIQKIITIPAALQGVSNPVPRVEHPDWLKRKIATKEDKFKQTSLTKFFSKT 1203

Query: 1158 KKDDFLNKTCNAETNLMDENVEDLEDFPKKRRNSVNGPRPIVRCFEVNNEQKTVKTTDQV 1217
            K    + K            ++D+ED  +      N    I R         T K     
Sbjct: 1204 KNVPTMGK------------IKDIEDLFEPTVEEDNAKIKIAR---------TTKKKAVS 1242

Query: 1218 DSLRQQLEPSEVSDQQPSSQNAIDTENIDRIVDYKGWLELKKRKWK-DNLDRRKKQKLGS 1276
               R QL   E     PS   ++D        DY GWL  +K KWK    DR+++ +L  
Sbjct: 1243 KRKRNQLTNEEDPLVLPSEIPSMDE-------DYVGWLNYQKIKWKIQARDRKRRDQLFG 1295

Query: 1277 LRASHQANGVSESLGDMINHKEAQRRTGVGSYFRRQETAMTRCHWQIIQLVPSSQSGVFL 1336
                              N   ++ R+ +GS  R+Q  +     W+++Q   S + GV  
Sbjct: 1296 ------------------NTNSSRERSALGSMIRKQAESYANSTWEVLQYKDSGEPGVLE 1337

Query: 1337 AWVVVEGIMVRIPITVPRLFYLNSKDPIVEKFPGRRV--------NKTLPHGRRSFN--- 1385
             +V + G +  I   +P+  Y+  K    +  P +++        + +LP+  ++ N   
Sbjct: 1338 VFVTINGKVQNITFHIPKTIYMKFKS---QTMPLQKIKNCLIEKSSASLPNNPKTSNPAG 1394

Query: 1386 --LIEVMIDEDQFRKESKKLAALLADPEV 1412
              L ++ + E  F +E +   ++  D  V
Sbjct: 1395 GQLFKITLPESVFLEEKENCTSIFNDENV 1423



 Score =  216 bits (550), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 150/605 (24%), Positives = 279/605 (46%), Gaps = 48/605 (7%)

Query: 1415 LGWQQNAAKIGMQRCAASSQWFNERISLARYAHI-------------------------- 1448
            L WQ    K  +    +S  W +  I L++Y++I                          
Sbjct: 1625 LNWQPTLLKKLVNHVLSSGSWISHLIKLSQYSNIPICNLRLDSMDYVIDVLYARKLKKEN 1684

Query: 1449 --LWISDDG-VPDLGGTSEEDEC----FADEVHQPVLTYPGAYRKVSVELKIHHLSVNAL 1501
              LW ++   +PD GG   + +       ++   P +   G Y  V +++ + +L+VN +
Sbjct: 1685 IVLWWNEKAPLPDHGGIQNDFDLNTSWIMNDSEFPKINNSGVYDNVVLDVGVDNLTVNTI 1744

Query: 1502 LKSNQVNEMEGGGLFGFDQDMN-SGPYNNELCGFDETTSSAPAFRVVKQLIQRCLTDAVT 1560
            L S  +N+ EG  L   +  ++      N    F     S  A  V++ +++    +A+ 
Sbjct: 1745 LTSALINDAEGSDLVNNNMGIDDKDAVINSPSEFVHDAFSNDALNVLRGMLKEWWDEALK 1804

Query: 1561 SGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEFRKLGATIIFANF 1620
              N  AD ++  L  W+ +P++KL D +L   +H + +K    L+ EF  LG+TI++A+ 
Sbjct: 1805 E-NSTADLLVNSLASWVQNPNAKLFDGLLRYHVHNLTKKALLQLVNEFSALGSTIVYADR 1863

Query: 1621 SKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLFMDQYNYGGIPAR 1680
            ++++I T K+      AY   ++KA++T  +F +++L    +W  L++MD++N+ G+   
Sbjct: 1864 NQILIKTNKYSPENCYAYSQYMMKAVRTNPMFSYLDLNIKRYWDLLIWMDKFNFSGLACI 1923

Query: 1681 ADESLDDDSQVDIVSSWNIAEYLPKEIQDHFVLVVSEFMYIPWKHAQKLAASRASLQEGS 1740
              E   ++     VS W + ++L    Q  F     ++M I      K   S   L  G+
Sbjct: 1924 EIEE-KENQDYTAVSQWQLKKFLSPIYQPEF----EDWMMIILDSMLKTKQSYLKLNSGT 1978

Query: 1741 SCTPSITVAAAENFESHIVQYVKGEISSYFTGKLLSIVRDAIHHMKKMNND-QHNSPGVM 1799
                 I     ++ E  +   + G  S  F+  L+  V+    + ++   D Q+ +  V+
Sbjct: 1979 QRPTQIVNVKKQDKEDSVENSLNG-FSHLFSKPLMKRVKKLFKNQQEFILDPQYEADYVI 2037

Query: 1800 QTAANIH-KVDAP-LEFIKHVCAAFALDQNVQHDVLVMRKNLLKYVRVREFAPEAEFRDP 1857
                  H  V  P LE +K +C    L ++   ++  +RK LLK   +REFA  AEF+DP
Sbjct: 2038 PVLPGSHLNVKNPLLELVKSLCHVMLLSKSTILEIRTLRKELLKIFELREFAKVAEFKDP 2097

Query: 1858 CPSFILPNVICSYCNDCRDLDLCRDMALLAQDWHCAMPQCGQPYDREVMENALLQIVRQR 1917
              S ++P+ +C YC    D+D C+  A     + C   +C + +++ +++  L+Q +R  
Sbjct: 2098 SLSLVVPDFLCEYCFFISDIDFCK--AAPESIFSCV--RCHKAFNQVLLQEHLIQKLRSD 2153

Query: 1918 ERLYHLQDLVCIRCNQVKAAHLAEQCACAGSFRCKEDASDFRSKMQIFLNIANRQGFQLL 1977
               Y +QDL C RC++VK  +++  C CAG++           K+ +F  +A   GF +L
Sbjct: 2154 IESYLIQDLRCSRCHKVKRDYMSAHCPCAGAWEGTLPRESIVQKLNVFKQVAKYYGFDIL 2213

Query: 1978 QECTS 1982
              C +
Sbjct: 2214 LSCIA 2218


>gi|403216226|emb|CCK70723.1| hypothetical protein KNAG_0F00540 [Kazachstania naganishii CBS 8797]
          Length = 2213

 Score = 1321 bits (3418), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 701/1445 (48%), Positives = 930/1445 (64%), Gaps = 97/1445 (6%)

Query: 17   QKLIRSAE-EELEAKLGYDL-----FSEGDK------RLGWLLTFASSSLEDEDTRKVYS 64
            Q+L+++   +E++A +G++      FS GD       R+GWL+      +  E      S
Sbjct: 39   QQLLQTQRVDEIDAVMGFERYRPPQFSGGDASGQVPGRVGWLVNMHPVVVSLESVHGSSS 98

Query: 65   C--------IDLYFVSQDGSTFKSKYKFRPYFYAA-TKEKMEMDVEAYLRRRYESQIADI 115
                     +D YF+ ++G  FKS   + PYF+   T ++M  DVE YL++  E  + +I
Sbjct: 99   GSGAGGIAGVDFYFLDEEGGGFKSTLTYDPYFFVTVTDDRMLNDVEEYLKKLLEGTLKNI 158

Query: 116  EILEKEDLDLKNHLSGLHKSYLKISFDTVQQLMDVKKDLLHVVERNQAKFDAAEAYESIL 175
            E L+KEDL L NHL GL K  +K+SF    QL + ++ L  +++ N         Y    
Sbjct: 159  EALQKEDLSLDNHLIGLKKPLIKLSFVNNNQLFEARRLLRPILQENSNTKTQRNIYRPHA 218

Query: 176  TGKREQRPQDFLDCIVDLREYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLLEKRVDLLQ 235
                    + F+D   ++REYDVPYH+R +ID DVR G+WY+V+        EK    + 
Sbjct: 219  VENTVGDAKRFID---EIREYDVPYHVRVSIDRDVRVGKWYNVTDLGFLECPEK----VA 271

Query: 236  RAEVHVCAFDIETTKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPK 295
             A+  V AFDIETTK PLKFPDA  D IMMISYM+DG GYLI NRE + EDIED EYTPK
Sbjct: 272  FADPVVLAFDIETTKPPLKFPDAAVDQIMMISYMIDGDGYLITNREIISEDIEDFEYTPK 331

Query: 296  PEFEGYFKVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSE 355
            PEF G F + N  +E+ LL+ +F H+++V+P +  T+NGD+FDWPF+ETRA  HG  M E
Sbjct: 332  PEFRGQFAIFNEQDELALLQRFFEHIRDVRPTVISTFNGDFFDWPFVETRARIHGLDMFE 391

Query: 356  ELGFQCDKNQGECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDM 415
            E+GF  D ++GE ++ + CH+DCF WVKRDSYLPQGSQGLKAVT+AKLGY+P+E++PE M
Sbjct: 392  EIGFAAD-SEGEYKSAYCCHMDCFRWVKRDSYLPQGSQGLKAVTQAKLGYNPIELDPELM 450

Query: 416  VRFAKEKPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEML 475
              +A  KPQ ++ YSVSDAVATYYLYM YVHPFIFSL +IIP++PDEVLRKG+GTLCEML
Sbjct: 451  TPYAYTKPQQLSEYSVSDAVATYYLYMKYVHPFIFSLCSIIPLNPDEVLRKGTGTLCEML 510

Query: 476  LMVQAYKANVICPNKHQSDPEKFYRNHLLESETYIGGHVECLESGVFRSDLPTSFKLDPS 535
            LMVQAYK N++ PNKH    E+FY  HLLESETY+GGHVE LE+GVFRSDL   F +DP+
Sbjct: 511  LMVQAYKNNILLPNKHTDPIERFYDGHLLESETYVGGHVESLEAGVFRSDLKNDFTIDPT 570

Query: 536  AYEQLLNNLDRDLQYAIKVEGKMDLESVSNYDEVKNAIMEKLLRLQEEPIREECPLIYHL 595
            A ++LL +L   L++ I+ E    L+ V+N +EVK  I   LL+L+E     E PLIYH+
Sbjct: 571  AVDELLADLPATLKFCIEKENNCSLDKVTNLEEVKEQITNSLLQLKENRKTHELPLIYHV 630

Query: 596  DVAAMYPNIILTNRLQPPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYYH 655
            DVA+MYPNI+ TNRLQP SI T+  C +CDFNRPGKTC R+L+W WRGE F  K  +Y  
Sbjct: 631  DVASMYPNIMTTNRLQPDSIKTERDCASCDFNRPGKTCARRLKWAWRGEFFPAKMDEYNM 690

Query: 656  LKKQIESEFVDGTNGHLSK---SFLDLPKMEQQSRLKDRLKKYCQKAYKRVLDKPVTELR 712
            +K+ +++E     N    K   +F +L   +Q + +K RL +Y +K Y RV    V E R
Sbjct: 691  IKRALQNETFPNKNKFSQKPILTFDELSYADQVAHIKKRLSEYSRKVYHRVKVSEVVE-R 749

Query: 713  EAGICMRENSFYVDTVRSFRDRRYEYKGLNKVWKGKLSEAKASGNSIKIQEAQDMVVLYD 772
            EA +C REN FYV+TVRSFRDRRYE+KGL K WKGK S+   +    K  EA  MVVLYD
Sbjct: 750  EAIVCQRENPFYVNTVRSFRDRRYEFKGLAKTWKGKASKIDPADKHEK-DEATKMVVLYD 808

Query: 773  SLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTD 832
            SLQLAHK ILNSFYGYVMRKG+RWYSMEMAG+   TGA IIQ AR L+E++G+PLELDTD
Sbjct: 809  SLQLAHKVILNSFYGYVMRKGSRWYSMEMAGITCLTGATIIQMARSLVERVGRPLELDTD 868

Query: 833  GIWCVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYET 892
            GIWC+LP SFP+N+TFK ++  KKL +SYPC MLN  V +  TNDQYQ LVDP    YET
Sbjct: 869  GIWCILPKSFPDNYTFKLEN-GKKLYLSYPCSMLNYRVHQQFTNDQYQELVDPEKLKYET 927

Query: 893  HSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIK 952
            HS+ SI FEVDGPY+AMILP SKEEG  IKKRYAVFN+DG+LAELKGFE+KRRGEL+LIK
Sbjct: 928  HSDNSIFFEVDGPYRAMILPTSKEEGKGIKKRYAVFNEDGSLAELKGFELKRRGELQLIK 987

Query: 953  VFQAELFDKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSL 1012
             FQ+++F  FL G +++ CY+AVA VANRWLD+LD +GK + D +LI+ I E+ +MSK+L
Sbjct: 988  NFQSDIFKLFLEGDSLQNCYNAVATVANRWLDVLDTEGKMLEDEDLIELICENRSMSKTL 1047

Query: 1013 ADYGEQKSCAVTTARRLSDFLGDTMVKDKGLRCQYIVACEPQGTPVSERAVPVAIFETDA 1072
             +Y  QKS ++TTA+RL DFLG+ MVKDKGL+C+YI++  P   PV+ERA+PVAIF  D 
Sbjct: 1048 KEYEGQKSTSITTAKRLGDFLGEEMVKDKGLQCKYIISSRPANAPVTERAIPVAIFSADI 1107

Query: 1073 EIMKFYLRKWCKTSS--DVGIRSIVDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVH 1130
             I + +LR+W    S  +  IR+I+DW YYK+RL S IQKIITIPAA+Q V NPVPRVVH
Sbjct: 1108 AIKRSFLRRWTADPSLDNFDIRTIIDWGYYKERLGSTIQKIITIPAALQNVENPVPRVVH 1167

Query: 1131 PDWLYKKVREKEDKFRQRKLVDIFSSLKKDDFLNKTCNAETNLMDENVEDLEDFPKKRRN 1190
            PDWL KK+    DKF+Q  L         + F  KT +     +   ++D+ED   K   
Sbjct: 1168 PDWLKKKINTMNDKFKQTSL---------NRFFTKTSDIP---VAGKIQDIEDILYK--- 1212

Query: 1191 SVNGPRPIVRCFEVNNEQKTVKTTDQVDSLRQQLE-PSEVSDQQPSSQNAIDTENIDRIV 1249
                PRP     +V+ + +  K       +   L  P E     PS              
Sbjct: 1213 GTEEPRPKKLSGKVSRKNRLAKRKRDQKEVEDSLTLPKEC----PSMHE----------- 1257

Query: 1250 DYKGWLELKKRKWKDNLDRRKKQKLGSLRASHQANGVSESLGDMINHKEAQRRTGVGSYF 1309
            DY GWL+ +K KWK     RK++              ++  GD   +     R+ +G+  
Sbjct: 1258 DYVGWLKYQKIKWKIQARDRKRR--------------TQLFGD---NNRTVDRSALGNMV 1300

Query: 1310 RRQETAMTRCHWQIIQLVPSSQSGVFLAWVVVEGIMVRIPITVPRLFYLNSKDPIVEKFP 1369
            R+Q        W+I+Q   +++ GV    +++ G + ++   +P+  Y+  K  +    P
Sbjct: 1301 RKQAETYANATWEILQYRKTNEPGVLEVHILINGKIQQLRFKIPKTVYVKLKTNVASLGP 1360

Query: 1370 GR-----RVNKTLPHGRR-----SFNLIEVMIDEDQFRKESKKLAALLADPEVEVLGWQQ 1419
             +     + N TLP+  +     S +L ++ + E  +R+E +K +++L D    VLG  +
Sbjct: 1361 IQDCMVEKSNATLPNHPQINRYPSGSLFKLTLPELVYREELEKRSSVLNDD--NVLGIFE 1418

Query: 1420 NAAKI 1424
             A  I
Sbjct: 1419 GAVDI 1423



 Score =  216 bits (549), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 153/608 (25%), Positives = 276/608 (45%), Gaps = 60/608 (9%)

Query: 1415 LGWQQNAAKIGMQRCAASSQWFNERISLARYAHI-------------------------- 1448
            L WQ N     + +  + S W    + +ARY++I                          
Sbjct: 1615 LNWQSNLCSKIINQIFSCSSWVAHMVKVARYSNIPVCNLQLDNMGYVIDVLYARKLRHEN 1674

Query: 1449 --LWISDDG-VPDLGGTSEEDE----CFADEVHQPVLTYPGAYRKVSVELKIHHLSVNAL 1501
              LW +++G +PDL G  +E +        E+  P +  P  Y K  +E++I +L++N +
Sbjct: 1675 IVLWWNENGPLPDLAGIEKEYDPNISGIMQELSFPDVNTPDIYDKTVLEIQIRNLTINTV 1734

Query: 1502 LKSNQVNEMEGGGLFGFDQDMNSGPYNNELCGFDETTSSAPAFRVVKQLIQRCLTDAVTS 1561
            L S  +NE EG  L   +    +   + +   F E   +A +  V+K L++    +A+  
Sbjct: 1735 LASTLINEAEGSDLTNVESSAMNSASSEKNSVFVEDAFNAESLTVLKNLLKDWWEEALNE 1794

Query: 1562 GNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEFRKLGATIIFANFS 1621
             +  AD ++     W+ +P S L D +L   +H + +K    LL EF  LG+T+IFA+ +
Sbjct: 1795 -DFTADLLVNAFISWVQNPESCLFDILLRYHVHNLTRKSLLQLLNEFNSLGSTVIFADRN 1853

Query: 1622 KVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLFMDQYNYGGIPARA 1681
            K+++ T KF      AY + ++KA++   LF++I+L    +W  L++MD++N+GG+    
Sbjct: 1854 KLMVKTNKFVPENCYAYSEYMVKAVKVNPLFKYIDLRIEKYWDVLIWMDKFNFGGLACST 1913

Query: 1682 DESLDDDSQVDIVSSWNIAEYLPKEIQDHFVLVVSEFMYIPWKHAQKLAASRASLQEGSS 1741
             +   D+   D  S W I   LP   Q  F     ++M I      K   +      G+ 
Sbjct: 1914 IQD-KDEQDYDAYSVWQIKNTLPPIFQTEF----DDWMAIILDSMTKTKRTYFEKNMGTQ 1968

Query: 1742 CTPSI--TVAAAENFESHIVQYVKGEISSYFTGKLLSIVRDAIHHMKKMNNDQH------ 1793
                I  T  +++  +  +        +  F   L+  V+    + ++   D        
Sbjct: 1969 RATQIIQTKKSSDGGDEEVNSL--SNFTELFAKPLIKRVKKLYRNQQEFILDPQYLEDYK 2026

Query: 1794 --NSPGVMQTAANIHKVDAPLEFIKHVCAAFALDQNVQHDVLVMRKNLLKYVRVREFAPE 1851
                PG+     N       LE +K +C   +L +    +V  +RK LLK   +REFA E
Sbjct: 2027 FPELPGLYLPLKN-----PLLELVKDLCQVMSLSKITLLEVRALRKELLKLFEIREFAKE 2081

Query: 1852 AEFRDPCPSFILPNVICSYCNDCRDLDLCRDMALLAQDWHCAMPQCGQPYDREVMENALL 1911
            AEF +PC + I+  V C YC     +D CR  +  + D+ C    C + +DR++++  L+
Sbjct: 2082 AEFSNPCKNLIINEVTCRYCFHATSIDFCRMDS--SGDFSCM--NCHKDFDRDLLQEFLI 2137

Query: 1912 QIVRQRERLYHLQDLVCIRCNQVKAAHLAEQCACAGSFRCKEDASDFRSKMQIFLNIANR 1971
            Q +      +  QDL C +C+++K  +++  C C+G +       D  +++ I+  +A+ 
Sbjct: 2138 QKLCSESDNFVSQDLHCSKCHKIKMDYMSTHCTCSGKWVNSAKTLDLENQVVIYRQVADY 2197

Query: 1972 QGFQLLQE 1979
              F LL++
Sbjct: 2198 FKFDLLKD 2205


>gi|392586304|gb|EIW75641.1| DUF1744-domain-containing protein [Coniophora puteana RWD-64-598 SS2]
          Length = 2282

 Score = 1320 bits (3417), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 686/1449 (47%), Positives = 916/1449 (63%), Gaps = 130/1449 (8%)

Query: 25   EELEAKLGYDLFSEGDKRLGWLLTFASSSLEDEDTRKVYSCIDLYFVSQDGSTFKSKYKF 84
            +E++ KLG+   SEG +R GWL+    + ++D D     + +D YF+  DG  FK   ++
Sbjct: 89   DEVDEKLGFARVSEGGRREGWLINMHPTLVKDPDYPGGKAAVDFYFIQDDGGMFKCTMQY 148

Query: 85   RPYFYAATKEKMEMDVEAYLRRRYESQIADIEILEKEDLDLKNHLSGLHKSYLKISFDTV 144
             PYFY A K   E  VE +L +R+E  I  I    KEDL L NHL G  + YL++ F  V
Sbjct: 149  EPYFYIACKPGSESSVEEWLMKRFEGLIVRITRDRKEDLKLPNHLMGHRRLYLQLCFRNV 208

Query: 145  QQLMDVKKDLLHVVERNQAKFDAAEAYESILTGK-------------------------- 178
              L+ V++D+  +   N AK DA +AY  +++                            
Sbjct: 209  SDLLAVRRDVAPLALANGAKRDAVDAYAEVVSATAGAGSYASGGTGGGGGAAMDIEMDGE 268

Query: 179  ------------------REQRPQDFLDCIVDLREYDVPYHIRFAIDNDVRCGQWYDVSI 220
                                 R +D  +CI+D+REYDVPY++R A+DN +R G WY V+ 
Sbjct: 269  YNAYAEIGGSSGAGRGGGASYRDRDPGECIIDVREYDVPYYLRVAMDNAMRVGLWYAVTF 328

Query: 221  SSTGPLLEKRVDLLQRAEVHVCAFDIETTKLPLKFPDADYDIIMMISYMLDGQGYLIINR 280
            ++  P      + ++RA+  V A+DIETTK PLKFPD   D +MMISYM+DG+GYLI NR
Sbjct: 329  TAGQPGFAPIAERVKRADPVVMAYDIETTKAPLKFPDHALDQVMMISYMIDGEGYLITNR 388

Query: 281  ECVGEDIEDLEYTPKPEFEGYFKVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWP 340
            E VGEDIED EYTPK  +EG F V N  +E   +  +F H+Q  KP +  T+NGD+FD+P
Sbjct: 389  EIVGEDIEDFEYTPKEGYEGPFTVFNEPDEAATIMRFFHHIQSAKPTVMATFNGDFFDFP 448

Query: 341  FLETRAAHHGFKMSEELGFQCDKNQGECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTK 400
            FL  R+  +G  M  E GF  D+ + E +++   H+DCF WVKRDSYLPQGSQGLKAVT 
Sbjct: 449  FLCARSKANGIDMFLETGFAIDQ-EDEFKSRCCVHMDCFRWVKRDSYLPQGSQGLKAVTT 507

Query: 401  AKLGYDPLEVNPEDMVRFAKEKPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSP 460
            AKLGY+P+E++PE M  +A E+PQ++A YSVSDAVATYYLYM YVHPFIFSL  IIP+ P
Sbjct: 508  AKLGYNPIELDPELMTPYAMEQPQVLAQYSVSDAVATYYLYMKYVHPFIFSLCNIIPLCP 567

Query: 461  DEVLRKGSGTLCEMLLMVQAYKANVICPNKHQSDPEKFYRNHLLESETYIGGHVECLESG 520
            DEVLRKGSGTLCE LLMV+AY+ ++I PN+H+      +  HLL SETY+GGHVE LE+G
Sbjct: 568  DEVLRKGSGTLCETLLMVEAYENHIIMPNRHEDAHFNMHEGHLLASETYVGGHVEALEAG 627

Query: 521  VFRSDLPTSFKLDPSAYEQLLNNLDRDLQYAIKVEGKMDLESVSNYDEVKNAIMEKLLRL 580
            VFRSD+PT FK+ P A +QL++ LD  L++ I  E K  L SV+NYDEVK+ I   L  +
Sbjct: 628  VFRSDIPTDFKIVPEAAQQLIDQLDDALKFCIVDESKASLASVTNYDEVKSEIQAALEEM 687

Query: 581  QEEPIREECPLIYHLDVAAMYPNIILTNRLQPPSIVTDEVCTACDFNRPGKTCLRKLEWV 640
            ++ P R + PLIYHLDVAAMYPNI+L+NRLQP SIV + VC  CD+NRPGKTC R+LEW 
Sbjct: 688  RDNPKRLDKPLIYHLDVAAMYPNIMLSNRLQPDSIVDESVCAVCDYNRPGKTCDRRLEWA 747

Query: 641  WRGEIFMGKRSDYYHLKKQIESE-FVDGTNGHLSKSFLDLPKMEQQSRLKDRLKKYCQKA 699
            WRGE F   R +Y  ++  +  E F     G   + F DL   EQ + L  RL  Y +K 
Sbjct: 748  WRGEFFPAHRDEYNMIRHALAQETFPSKRPGGPQRRFADLTDAEQTALLHKRLGDYSRKV 807

Query: 700  YKRVLDKPVTELREAGICMRENSFYVDTVRSFRDRRYEYKGLNKVWKGKLSEAKASGNSI 759
            YK++ D  V E+R + +C REN FYVDTVR FRDRRYEYKGL+K WK  L    + G SI
Sbjct: 808  YKKIKDTKV-EMRTSIVCQRENPFYVDTVRRFRDRRYEYKGLHKTWKKNLDAVVSEGKSI 866

Query: 760  -KIQEAQDMVVLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARL 818
             ++ EA+ M+VLYDSLQLAHKCILNSFYGYVMRKGARW+SMEMAG+   TGA IIQ AR 
Sbjct: 867  AEVDEAKKMIVLYDSLQLAHKCILNSFYGYVMRKGARWHSMEMAGITCLTGATIIQMARA 926

Query: 819  LIEKIGKPLELDTDGIWCVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQ 878
            L+E++G+PLELDTDGIWC+LPG FPENF FK  +  K L  SYPC MLN  V    TN  
Sbjct: 927  LVEQLGRPLELDTDGIWCMLPGVFPENFKFKLNN-GKALAFSYPCTMLNHLVHAQFTNHA 985

Query: 879  YQTLVDPVSKTYETHSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELK 938
            Y  L +P +  Y+ HSE SI FE+DGPY+AMILP+SKEE  L+KKRYAVFNDDG++AELK
Sbjct: 986  YHDL-NPETGDYDIHSENSIFFELDGPYRAMILPSSKEEDKLLKKRYAVFNDDGSMAELK 1044

Query: 939  GFEIKRRGELKLIKVFQAELFDKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSEL 998
            GFE+KRRGEL+LIK+FQ++LF++FL G+T EECY AVA  A++WLD+L ++ + ++D EL
Sbjct: 1045 GFEVKRRGELQLIKIFQSQLFERFLLGTTTEECYRAVAHAADQWLDILFSKAETLSDEEL 1104

Query: 999  IDYISESSTMSKSLADYGEQKSCAVTTARRLSDFLGDTMVKDKGLRCQYIVACEPQGTPV 1058
            +D I+E+ +MSK+LA+Y  QKS +++TA+RL++FLGD MVKDKGL C++I++ +P G PV
Sbjct: 1105 VDLIAENRSMSKTLAEYAGQKSTSISTAKRLAEFLGDQMVKDKGLACKFIISAQPHGAPV 1164

Query: 1059 SERAVPVAIFETDAEIMKFYLRKWCKTS--SDVGIRSIVDWSYYKQRLSSAIQKIITIPA 1116
            +ERAVPVAIF  +  + + YLRKW K +  +   +R+I+DW YY +RL S IQK+ITIPA
Sbjct: 1165 TERAVPVAIFSAEESVKRTYLRKWLKNNGLTSFELRAILDWDYYIERLGSVIQKLITIPA 1224

Query: 1117 AMQKVSNPVPRVVHPDWLYKKVREKEDKFRQRKLVDIFSSLKKDDFLNKTCNAETNLMDE 1176
            AMQKV+NPVPR+ HPDWL+++V  + DKF+Q K+ D F+         +    E+    +
Sbjct: 1225 AMQKVANPVPRIRHPDWLHRRVAGQVDKFKQNKMTDFFT---------RAPATESQFETQ 1275

Query: 1177 NVEDLEDF------PKKRRNSVNGPRPIVRCFEVNNEQKTVKTTDQVDSLRQQLEPSEVS 1230
            +  D+EDF      P + R +V   +P+ R       Q+T +         ++  P +V 
Sbjct: 1276 DDPDMEDFGQSSAQPSQARIAVVKRKPVAR-------QETPE---------EEEAPVDVP 1319

Query: 1231 DQQPSSQNAIDTENIDRIVDYKGWLELKKRKWKDNLDRRKKQKLGSLRASHQANGVSESL 1290
               P               +Y  W++  K +WK    RR++ + G   AS          
Sbjct: 1320 LPNPER-------------NYSAWIKAIKPRWK----RRREARWGDATAS---------- 1352

Query: 1291 GDMINHKEAQRRTGVGSYFRRQETAMTRCHWQIIQLVPSSQSGVFLAWVVVEGIMVRIPI 1350
                          V S F+  +    R  W IIQ+ PS   G F  W+ V+  +V IP+
Sbjct: 1353 -------------AVPSMFKGVKVRTAR-RWDIIQIRPSKILGRFNLWLSVDNSVVSIPL 1398

Query: 1351 TVPRLFYLNSKDPI------VEKFPGRRVNKTLPHGRRSFNLIEVMIDEDQFRKESKKLA 1404
             +PR FYL+ K P        E +   +V + LP   +  NL +V + ED +++  +   
Sbjct: 1399 RIPREFYLHFKTPPRDNLFHAEYYSCAKVVRHLPRNFQCNNLYKVSVKEDTYQEIEEHFT 1458

Query: 1405 ALLADPEVE 1413
             L  DP V+
Sbjct: 1459 DLTNDPNVD 1467



 Score =  291 bits (744), Expect = 4e-75,   Method: Compositional matrix adjust.
 Identities = 196/660 (29%), Positives = 324/660 (49%), Gaps = 70/660 (10%)

Query: 1386 LIEVMIDEDQFRKESKKLA--ALLADPE------VEVLGWQQNAAKIGMQRCAASSQWFN 1437
            ++  M D+  F   + KLA   +L+ P+      ++V  WQ + AK  + R      W +
Sbjct: 1632 VLSSMKDQSYFDMWTPKLAKFPVLSMPKTRKPHSLDVFPWQTHVAKNMLSRYLNVGSWLD 1691

Query: 1438 ERISLARY-----AHI-----------------------LWISDDGVPDLGGTSEEDECF 1469
              I+LA Y      H+                       LW S    PDLGG  E+D   
Sbjct: 1692 RSIALADYYDVPIGHVDGDQPILLSDISFARRLAEQDIVLWWSPSDRPDLGGV-EQDNRP 1750

Query: 1470 ADEVHQPVLTYPGAYRKVSVELKIHHLSVNALLKSNQVNEMEG-GGLFGFD------QDM 1522
             +E+       PG Y  V +E+ + +L+VN++L S  VNE+EG GG   FD       + 
Sbjct: 1751 TEELQTTEFNSPGCYSNVCLEITVRNLAVNSVLHSLVVNELEGAGGATSFDSVSRTLNEY 1810

Query: 1523 NSGPYNNELCGFDETTSSAPAFRVVKQLIQRCLTDAVTSGNVF---ADAILQHLYRWLCS 1579
            ++G    +L    E+  S+  F ++K LI+  L D +   N F   A   + H +RW+ S
Sbjct: 1811 SAGEQQRDLT-LGESQVSSITFGILKSLIKGWLIDKIE--NDFQSPATLTIDHFWRWVSS 1867

Query: 1580 PHSKLHDPVLHRILHKVMQKVFAMLLAEFRKLGATIIFANFSKVIIDTGKFDLSAAKAYC 1639
              S ++DP +HR +H +M+K F  ++AEF++LG+ +++A+FS++++ T K     A AY 
Sbjct: 1868 SASHMYDPNIHRFIHGLMRKTFIQMMAEFKRLGSHVVYADFSRILLATSK-PPGTAHAYA 1926

Query: 1640 DSLLKALQTRELFEWIELEPVHFWHSLLFMDQYNYGGIPARADESLDDDSQVDIVSSWNI 1699
              +  A+ + ELF+ I L    F+  LLFMDQ N GG+      +L+    + I   WNI
Sbjct: 1927 TYITTAVNSNELFQHIFLRTERFYDYLLFMDQANLGGVVCEDPLALEPPEDISIELRWNI 1986

Query: 1700 AEYLPKEIQDHFVLVVSEFMYIPWKHAQKLAAS-RASLQEGSSCTPSITVAAAENFESHI 1758
              +LP  IQ  F  ++   +   +K  QK   + R  L+   + TP  T    +  + + 
Sbjct: 1987 QTFLPAAIQQDFANIMQYCIVKLFKIRQKTNQTQRKPLRVLDNQTPDAT--QRDTAKENE 2044

Query: 1759 VQYVKGEISSYFTGKLLSIVRDAIHHMKKMNND-----QHNSPGVMQTAANIHKVDAPLE 1813
            ++  +  I+     KLLS V      ++    D     Q   P  ++  + +   +  LE
Sbjct: 2045 IELTRDFIARQLQRKLLSTVGKIQDRIRDAATDEELHEQFRFP--VRPGSYLALSNPVLE 2102

Query: 1814 FIKHVCAAFALDQNVQHDVLVMRKNLLKYVRVREFAPEAEFRDPCPSFILPNVICSYCND 1873
            F+K  CA F L ++   +V +++++LL    VREFA EA FR+PC    L NV C +C+ 
Sbjct: 2103 FVKFACAVFGLARDYSVEVGLLKRSLLDLAGVREFAAEAVFRNPCEPLKLSNVPCRHCDQ 2162

Query: 1874 CRDLDLCRDMAL-------LAQDWHCAMPQCGQPYDREVMENALLQIVRQRERLYHLQDL 1926
             RD D CRD  L       +   W C    CG  +DR  +E  L+++V   ER Y  QD+
Sbjct: 2163 LRDFDFCRDEELAPAPGGSVTVRWTCGT--CGGEFDRMAIELDLMKMVANLERAYTQQDM 2220

Query: 1927 VCIRCNQVKAAHLAEQCACAGSFRCKEDASDFRSKMQIFLNIANRQGFQLLQECTSWILE 1986
            VC++C Q+++ +++  C C+G+++     ++ R +++  +N+A   G   L+EC   +LE
Sbjct: 2221 VCVKCKQLRSDNVSRWCQCSGAYQLTIGKAEMRRRLRTIVNVALVHGLPRLKECAQTVLE 2280


>gi|170114426|ref|XP_001888410.1| predicted protein [Laccaria bicolor S238N-H82]
 gi|164636722|gb|EDR01015.1| predicted protein [Laccaria bicolor S238N-H82]
          Length = 2229

 Score = 1320 bits (3416), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 685/1446 (47%), Positives = 920/1446 (63%), Gaps = 107/1446 (7%)

Query: 8    RQDGRRTKKQKLIRSA-EEELEAKLGYDLFSEGDKRLGWLLTFASSSLEDEDTRKVYSCI 66
            R+D      ++  R+A  +E++ KLG+    EG ++ GWL+    + ++D D     + +
Sbjct: 50   REDDGTQLAERFERAALNDEVDEKLGFGRIQEGVRKEGWLVNMHPTLVKDPDWPSGKAAV 109

Query: 67   DLYFVSQDGSTFKSKYKFRPYFYAATKEKMEMDVEAYLRRRYESQIADIEILEKEDLDLK 126
            D YF+  DG  FK   ++ PYF  A K   E  VE +L+++YE  I  I   +KEDL + 
Sbjct: 110  DFYFIQDDGGMFKCTLQYEPYFCIACKSGTEASVEEWLKKKYEGLICRISREKKEDLKVP 169

Query: 127  NHLSGLHKSYLKISFDTVQQLMDVKKDLLHVVERNQAKFDAAEAYESILTGKREQRPQDF 186
            NHL G  + +L++ F  +  L+ V++D+L + + N AK DA +AY  ++   RE    D 
Sbjct: 170  NHLMGHRRLFLQLCFHNISDLLTVRRDILPLAQANSAKRDAVDAYAEVI---RETAAMDI 226

Query: 187  ------------------------LDCIVDLREYDVPYHIRFAIDNDVRCGQWYDVSISS 222
                                     + I+D+REYD+PY++R AIDND+R G WY V+ ++
Sbjct: 227  EMEDEAWATSVQPGRGGGGRDSDPREGIIDIREYDIPYYLRVAIDNDIRVGLWYAVTFTA 286

Query: 223  TGPLLEKRVDLLQRAEVHVCAFDIETTKLPLKFPDADYDIIMMISYMLDGQGYLIINREC 282
              P      + ++RA+  V A+DIETTK PLKFPD   D +MMISYM+DGQGYLI NRE 
Sbjct: 287  GHPSFCHIAERVKRADPVVMAYDIETTKAPLKFPDQAIDQVMMISYMVDGQGYLITNREI 346

Query: 283  VGEDIEDLEYTPKPEFEGYFKVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFL 342
            V EDIED EYTP+  +EG F + N  +E   ++ +F+H+Q+VKP +  T+NGD+FD+PFL
Sbjct: 347  VSEDIEDFEYTPREGYEGPFIIFNEKDEAATIKRFFSHIQDVKPTVMATFNGDFFDFPFL 406

Query: 343  ETRAAHHGFKMSEELGFQCDKNQGECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAK 402
            + R+  +G  M  E GF  D  + E +++   H+DCF WVKRDSYLPQGSQGLKAVT  K
Sbjct: 407  DARSKVNGIDMFLETGFAKDA-EDEYKSRTCVHMDCFRWVKRDSYLPQGSQGLKAVTTYK 465

Query: 403  LGYDPLEVNPEDMVRFAKEKPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDE 462
            LGY+P+E++PE M  +A E+PQ +A YSVSDAVATYYLYM YVHPFIFSL  IIP++PDE
Sbjct: 466  LGYNPIELDPELMTPYALEQPQALAQYSVSDAVATYYLYMKYVHPFIFSLCNIIPLNPDE 525

Query: 463  VLRKGSGTLCEMLLMVQAYKANVICPNKHQSDPEKFYRNHLLESETYIGGHVECLESGVF 522
            VLRKGSGTLCE LLMV+AY+ ++I PN+H+      Y  HLL SETY+GGHVE LE+GVF
Sbjct: 526  VLRKGSGTLCETLLMVEAYRGHIIMPNRHEDAHGSTYEGHLLASETYVGGHVEALEAGVF 585

Query: 523  RSDLPTSFKLDPSAYEQLLNNLDRDLQYAIKVEGKMDLESVSNYDEVKNAIMEKLLRLQE 582
            RSD+ T FK+ P+A +QL+++LD  L + I  E K  L+ V+NY+EVK  I   L  +++
Sbjct: 586  RSDIATDFKIVPAAVQQLMDDLDAALTFCITEESKCSLDDVTNYEEVKAEIKAALEVMRD 645

Query: 583  EPIREECPLIYHLDVAAMYPNIILTNRLQPPSIVTDEVCTACDFNRPGKTCLRKLEWVWR 642
             P R + PLIYHLDVAAMYPNI+L+NRLQP S+V + VC  CD+NRPGKTC R+LEW WR
Sbjct: 646  NPKRVDNPLIYHLDVAAMYPNIMLSNRLQPDSMVDESVCAVCDYNRPGKTCDRRLEWAWR 705

Query: 643  GEIFMGKRSDYYHLKKQIESE-FVDGTNGHLSKSFLDLPKMEQQSRLKDRLKKYCQKAYK 701
            GE F   R ++  +K  +  E F     G   + F DL   EQ + L  RL  Y +K YK
Sbjct: 706  GEFFPAHRDEFNMIKHALNQESFPPKRPGGPQRRFPDLNPTEQTALLHKRLGDYSRKVYK 765

Query: 702  RVLDKPVTELREAGICMRENSFYVDTVRSFRDRRYEYKGLNKVWKGKLSEAKASGNSI-K 760
            +  D  V E REA +C REN FYVDTVR FRDRRYEYKGL+K WK  L      G SI +
Sbjct: 766  KTKDTKV-ENREAIVCQRENPFYVDTVRRFRDRRYEYKGLHKTWKKNLDTFVGEGRSITE 824

Query: 761  IQEAQDMVVLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLI 820
            + EA+ M+VLYDSLQLAHKCILNSFYGYVMRKGARW+SMEMAG+   TGA IIQ AR L+
Sbjct: 825  VDEAKKMIVLYDSLQLAHKCILNSFYGYVMRKGARWHSMEMAGITCLTGATIIQMARALV 884

Query: 821  EKIGKPLELDTDGIWCVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQ 880
            E+IG+PLELDTDGIWC+LPG FPENF FK  +  K +  SYPC MLN  V    TN QY 
Sbjct: 885  EQIGRPLELDTDGIWCMLPGVFPENFKFKLTN-GKNIGFSYPCTMLNHLVHAKFTNHQYH 943

Query: 881  TLVDPVSKTYETHSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGF 940
             L DP +  Y  HSE SI FE+DGPYKAMILP+SKEE  L+KKRYAVFNDDG+LAELKGF
Sbjct: 944  DL-DPDTGEYVIHSENSIFFELDGPYKAMILPSSKEEDKLLKKRYAVFNDDGSLAELKGF 1002

Query: 941  EIKRRGELKLIKVFQAELFDKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELID 1000
            E+KRRGEL+LIK+FQ+++F+KFL G+T +ECY+AVA VA++WLD+L +Q + + D EL++
Sbjct: 1003 EVKRRGELQLIKIFQSQIFEKFLLGTTTQECYAAVAQVADQWLDVLYSQAESLGDDELVE 1062

Query: 1001 YISESSTMSKSLADYGEQKSCAVTTARRLSDFLGDTMVKDKGLRCQYIVACEPQGTPVSE 1060
             I+E+ +MSK+LA+YG QKS +++TA+RL++FLGD MVKDKGL C++I++ +P G PV+E
Sbjct: 1063 LIAENRSMSKTLAEYGSQKSTSISTAKRLAEFLGDQMVKDKGLACKFIISAKPMGAPVTE 1122

Query: 1061 RAVPVAIFETDAEIMKFYLRKWCKTSSDVG--IRSIVDWSYYKQRLSSAIQKIITIPAAM 1118
            RA+PVAIF  +  + + YLR+W K +  V   +RSI+DW+YY +RL S IQK+ITIPAAM
Sbjct: 1123 RAIPVAIFSAEESVKRTYLRRWLKDNGLVTFDLRSILDWNYYIERLGSVIQKLITIPAAM 1182

Query: 1119 QKVSNPVPRVVHPDWLYKKVREKEDKFRQRKLVDIFSSLKKDDFLNKTCNAETNLMDENV 1178
            QKVSNPVPRV HPDWL+++V    DKF+Q KL          DF  +         +   
Sbjct: 1183 QKVSNPVPRVRHPDWLFRRVAGAVDKFKQNKLT---------DFFRQKGEEGDEGEETQP 1233

Query: 1179 EDLEDFPKKRRNSVNGPRPIVRCFEVNNEQKTVKTTDQVDSLRQQLEPSEVSDQQPSSQN 1238
             D+EDF  + R  +      V+   V  E                  P +V+D+   +  
Sbjct: 1234 ADMEDFGLEPRQVIRPGFSFVKRGFVREES-----------------PEDVTDKPLPNPT 1276

Query: 1239 AIDTENIDRIVDYKGWLELKKRKWKDNLDRRKKQKLGSLRASHQANGVSESLGDMINHKE 1298
                      V+Y  W++  + +WK      KKQ+     A +    V  S+      + 
Sbjct: 1277 ----------VNYSAWIKAMRPRWK------KKQE-----ARYGGGTVIPSMFQGTRVRS 1315

Query: 1299 AQRRTGVGSYFRRQETAMTRCHWQIIQLVPSSQSGVFLAWVVVEGIMVRIPITVPRLFYL 1358
              R                   W I+QL PS   G F+ W+ V+  ++ +P+ VPR FY+
Sbjct: 1316 NHR-------------------WDIVQLRPSKVPGRFMLWLQVDSELLAVPLRVPREFYI 1356

Query: 1359 NSKDPI-----VEKFPGRRVNKTLPHGRRSFNLIEVMIDEDQFRKESKKLAALLADPEVE 1413
            + K P       E +   +V + LPH     NL ++++ E+ ++K  +    L  DP V+
Sbjct: 1357 HLKKPAENIFQTEYYSCEKVTRNLPHDLPCINLYKIIVREEVYQKIQEHFVDLTNDPNVD 1416

Query: 1414 VLGWQQ 1419
             +  QQ
Sbjct: 1417 GVFEQQ 1422



 Score =  297 bits (761), Expect = 4e-77,   Method: Compositional matrix adjust.
 Identities = 188/621 (30%), Positives = 314/621 (50%), Gaps = 56/621 (9%)

Query: 1412 VEVLGWQQNAAKIGMQRCAASSQWFNERISLARY-----AHI------------------ 1448
            +++  W  + A+  + R  +   W +  I LA Y      HI                  
Sbjct: 1615 LDIFPWHSHLAQKMLNRYLSLGLWLDRMIDLAEYYDVPVGHIEGDQPLMLSDISFARRLV 1674

Query: 1449 -----LWISDDGVPDLGGTSEEDECFADEVHQPVLTYPGAYRKVSVELKIHHLSVNALLK 1503
                 LW S    PDLGG  E D    +++ +      G Y  V +E+ + +L+VN++L+
Sbjct: 1675 QQDIVLWWSPGDQPDLGGI-EHDRRPTEDLPKTDFLSAGVYSNVCLEITVRNLAVNSILQ 1733

Query: 1504 SNQVNEMEG-GGLFGFDQ------DMNSGPYNNELCGFDETTSSAPAFRVVKQLIQRCLT 1556
            S  VNE+EG GG   FD       +  SG    +L    E+  SA  F ++K +++  L 
Sbjct: 1734 SVMVNELEGSGGATAFDSVSHTLDEYASGETQRDLT-LGESQVSAQTFGIMKNMLKSWLV 1792

Query: 1557 DAVTSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEFRKLGATII 1616
            D + +    A+  L H +RW+ S  S L+D  +HR +H +M+K F  LLAEF++LG+ ++
Sbjct: 1793 DKIQNIENPANLALDHFWRWITSSASHLYDQSIHRFVHGLMRKTFIQLLAEFKRLGSVVV 1852

Query: 1617 FANFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLFMDQYNYGG 1676
            +A+FS +++ T K     A AY   +  A+ + ELF+ I L    F+  L+ MD+ N GG
Sbjct: 1853 YADFSTILLATSK-PPGTAHAYATYITTAVTSHELFQHIYLNTERFYDFLVCMDRANLGG 1911

Query: 1677 IPARADESLDDDSQVDIVSSWNIAEYLPKEIQDHFVLVVSEFMYIPWKHAQKL-AASRAS 1735
            I      +L+   ++ +   WNI ++LP  IQ  F +++  F+   ++  QKL   S+  
Sbjct: 1912 IVCEDPLALEPPEELAMEMRWNIEQFLPPAIQGDFSMIIQYFIIELYRIKQKLNLTSKTP 1971

Query: 1736 LQEGSSCTPSITVAAAENFESHIVQYVKGEISSYFTGKLLSIV-----RDAIHHMKKMNN 1790
            L+   +  P  T   A   +++ ++ +   I+   T K+L +V     R   + M +  +
Sbjct: 1972 LRVLQNDAPDATQRDAA--KANEIELISEFIARRLTRKMLKVVANIHDRQREYQMLEEPS 2029

Query: 1791 DQHNSPGVMQTAANIHKVDAPLEFIKHVCAAFALDQNVQHDVLVMRKNLLKYVRVREFAP 1850
             + + P  +   + +H  +  LEF K  CA FAL +  +++V ++++NLL+ V VREFA 
Sbjct: 2030 GEFSFP--VLPGSYLHMSNPTLEFTKFACAVFALAKEYRNEVGILKRNLLELVGVREFAG 2087

Query: 1851 EAEFRDPCPSFILPNVICSYCNDCRDLDLCRDMALLAQD------WHCAMPQCGQPYDRE 1904
            EA FR+PC    L NV C +C+  RD D CRD  LL  +      W C    CG  YDR 
Sbjct: 2088 EATFRNPCEPLKLANVPCRHCDVLRDFDFCRDPELLPNNVDINPRWLCN--HCGGEYDRV 2145

Query: 1905 VMENALLQIVRQRERLYHLQDLVCIRCNQVKAAHLAEQCACAGSFRCKEDASDFRSKMQI 1964
             +E  L+++ R  ER +  QDL C +C Q+++ +++  C C+GS++     +D R K++ 
Sbjct: 2146 AIEFMLIEMTRALERNFAQQDLRCGKCQQIQSDNVSRYCRCSGSYQFTISKADMRRKLRT 2205

Query: 1965 FLNIANRQGFQLLQECTSWIL 1985
             +N+A       L+EC+  +L
Sbjct: 2206 IVNVAREYNLPRLKECSQTLL 2226


>gi|164663237|ref|XP_001732740.1| hypothetical protein MGL_0515 [Malassezia globosa CBS 7966]
 gi|159106643|gb|EDP45526.1| hypothetical protein MGL_0515 [Malassezia globosa CBS 7966]
          Length = 2189

 Score = 1319 bits (3414), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 677/1427 (47%), Positives = 912/1427 (63%), Gaps = 110/1427 (7%)

Query: 25   EELEAKLGYDLFSEGDKRLGWLLTFASSSLEDEDTRKVYSCIDLYFVSQDGSTFKSKYKF 84
            +E++ K+G+    +G+ R  W++    + L D+      S +D YF+  D S FK    +
Sbjct: 48   DEIDEKMGFLRLEQGETRQAWMVNMHPTLLPDDAHPSGRSGVDYYFIQDDTSMFKVTAVY 107

Query: 85   RPYFYAATKEKMEMDVEAYLRRRYESQIADIEILEKEDLDLKNHLSGLHKSYLKISFDTV 144
            +PYF        E  VE +LRRR+E  +  +E    +DL L NHL G  ++ L++ F  V
Sbjct: 108  QPYFLLGCYPGTESLVEEWLRRRFEGVLHSVERKHLDDLKLPNHLVGNQRTALQLRFMNV 167

Query: 145  QQLMDVKKDLLHVVERNQAKFDAAEAYESILTGKREQRPQDF---LD------------- 188
            Q L+ V++DLL + +  Q K  A EAY ++L+        D    LD             
Sbjct: 168  QDLLTVRRDLLPLAQDAQKKVSAVEAYANMLSDVSGPSSADVSVGLDMDGAYTMASASST 227

Query: 189  -------CIVDLREYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLLEKRVDLLQRAEVHV 241
                   CI+ L EYDVPY++R AIDND+R G WYDVS       L    + ++RA+  V
Sbjct: 228  GGKSAEQCIIALWEYDVPYYLRVAIDNDIRVGLWYDVSFHEGAVSLRAVPERVKRADPVV 287

Query: 242  CAFDIETTKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGY 301
             AFDIETTK PLKFPDA+ D IMMISYM+DGQG+LI NR+ + EDIED EYTPK E+EG 
Sbjct: 288  MAFDIETTKQPLKFPDAEIDAIMMISYMIDGQGFLITNRQIISEDIEDFEYTPKDEYEGP 347

Query: 302  FKVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQC 361
            F + N  +E+ LLR +FAH+QE +P +  TYNGD FD+ F++ RA  HG  M  E+GF  
Sbjct: 348  FIIFNEPDEVALLRRFFAHIQEARPTVIATYNGDSFDFMFVDVRARIHGINMKHEIGFAK 407

Query: 362  DKNQGECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKE 421
            D +  E +++   HLDCF WVKRDSYLPQGSQGLKAVT AKLGYDP+E++PE M  +A E
Sbjct: 408  DADD-EYKSRHCSHLDCFRWVKRDSYLPQGSQGLKAVTVAKLGYDPMELDPELMTPYASE 466

Query: 422  KPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAY 481
            +PQ +A YSVSDAVATYYLYM YVHPFIFSL  IIP++PDEVLRKG+GTLCE LLMVQAY
Sbjct: 467  QPQTLAQYSVSDAVATYYLYMKYVHPFIFSLCNIIPLNPDEVLRKGTGTLCETLLMVQAY 526

Query: 482  KANVICPNKHQSDPEKFYRNHLLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQLL 541
            K +++ PN+H    +  Y  H+LESETY+GGHVE LE+GVFRSD+PT F+++PS+ + L+
Sbjct: 527  KNHILMPNRHIDPIDNTYEGHILESETYVGGHVEALEAGVFRSDIPTDFRINPSSIQMLI 586

Query: 542  NNLDRDLQYAIKVEGKMDLESVSNYDEVKNAIMEKLLRLQEEPIREECPLIYHLDVAAMY 601
            ++LD  L ++I  EG+M L+ + NYDEV+  I   L  L+++PIR++ PLIYHLDVAAMY
Sbjct: 587  DDLDHALNFSITEEGRMTLDDIENYDEVRGTICGMLEALRDKPIRQDKPLIYHLDVAAMY 646

Query: 602  PNIILTNRLQPPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYYHLKKQIE 661
            PNI+L+NRLQP S+V + +C +C+FNRPG TC ++++W WRGE F  KR +   ++  ++
Sbjct: 647  PNIMLSNRLQPDSVVDEAMCASCNFNRPGMTCDKRMKWAWRGEYFPAKRDEINMIRHALD 706

Query: 662  SEFVDGTNGHLSK--SFLDLPKMEQQSRLKDRLKKYCQKAYKRVLDKPVTELREAGICMR 719
             E   G +   +K  ++ DL   EQ + L+ RL  Y +K YKR  D   T +REA IC R
Sbjct: 707  METFPGRDDRQTKTRTYQDLSPSEQSALLQKRLADYSRKVYKRAHDTK-TVIREAIICQR 765

Query: 720  ENSFYVDTVRSFRDRRYEYKGLNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHK 779
            EN FY++TVR FRDRRYEYKGL K WK  L +A   G      EA+ M+VLYDSLQLAHK
Sbjct: 766  ENPFYINTVRDFRDRRYEYKGLLKKWKKNLEKANEGGALNDTLEAKKMIVLYDSLQLAHK 825

Query: 780  CILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLP 839
            CILNSFYGYVMRKGARWYSMEMAG+   TGA IIQ A+ L++ IG+PLELDTDGIWC+LP
Sbjct: 826  CILNSFYGYVMRKGARWYSMEMAGITCLTGATIIQMAKELVDGIGRPLELDTDGIWCMLP 885

Query: 840  GSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIE 899
            G+FPENFTF+ ++  K   +SYPC MLN  V +  TN QY  LVD  +  Y+ HSE SI 
Sbjct: 886  GTFPENFTFRCRN-GKPFGVSYPCTMLNYMVHQRFTNHQYHDLVDSQTGEYKVHSENSIF 944

Query: 900  FEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELF 959
            FE+DGPY+AMILP+SKEE  L+KKRYAVF++DG+LAELKGFE+KRRGEL+LIK FQ ++F
Sbjct: 945  FELDGPYRAMILPSSKEEDKLLKKRYAVFDEDGSLAELKGFEVKRRGELQLIKDFQKQIF 1004

Query: 960  DKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLADYGEQK 1019
             KFL G T+E CY+AVA VA++WLD+L ++G  + D ELID I+E+ +MSK L++YG QK
Sbjct: 1005 SKFLLGDTLESCYAAVARVADQWLDVLYSKGSTLHDEELIDLIAENKSMSKLLSEYGAQK 1064

Query: 1020 SCAVTTARRLSDFLGDTMVKDKGLRCQYIVACEPQGTPVSERAVPVAIFETDAEIMKFYL 1079
            S A+TTARRL++ LG  +VKD+GL C++IV+ +P G PV++RAVPVAIF  + +I   +L
Sbjct: 1065 STAITTARRLAEILGQQVVKDRGLACKFIVSAKPHGAPVTDRAVPVAIFNAEPDIKAHFL 1124

Query: 1080 RKWCKTSS--DVGIRSIVDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLYKK 1137
            R++ +  S  +  +R I+DW+YY  R +  IQK+ITIPAAMQK+ NPVPRV HPDWL K+
Sbjct: 1125 RRFLRDPSLNNFDLRHILDWNYYIDRFAGVIQKLITIPAAMQKIPNPVPRVRHPDWLMKR 1184

Query: 1138 VREKEDKFRQRKLVDIFSSLKKDDFLNKTCNAETNLMDENVEDLEDFPKKRRNSVNGPRP 1197
            V  +EDK  Q KL  I +S                                  +V     
Sbjct: 1185 VAAREDKVSQVKLDRIMTS---------------------------------EAVRSRSK 1211

Query: 1198 IVRCFEVNNEQKTVKTTDQVDSLRQQLEPSEVSD--QQP--SSQNAIDTENIDRIVDYKG 1253
             V     ++EQ+T          R +++P  VSD  QQP  +S+  +   +ID   DY G
Sbjct: 1212 AVTAGVASSEQET----------RSRVDPVRVSDPVQQPKLTSERDVPIPSIDE--DYPG 1259

Query: 1254 WLELKKRKWKDNLDRRKKQKLGSLRASHQANGVSESLGDMINHKEAQRRTGVGSYFRRQE 1313
            W+   + +W+    +++ ++ G  R                       RT +G     + 
Sbjct: 1260 WVSAMRGRWR----KQRAERRGIERP----------------------RTTLGGLLEERS 1293

Query: 1314 TAMTRCHWQIIQLVPSSQSGVFLAWVVVEGIMVRIPITVPRLFYLNSKDP-----IVEKF 1368
            +AM    W I+QL P+ + G F  WV+V+  M  + + VPR  Y+N   P     +   +
Sbjct: 1294 SAMASATWDIVQLAPTIRPGEFRMWVLVDRQMHALRLQVPRQVYVNFLKPPQPGMLRASY 1353

Query: 1369 PGRRVNKTLPHGRRSFNLIEVMIDEDQFRKESKKLAALLADPEVEVL 1415
                V++TLP G +  +L+   I E ++       + LL  P V+ +
Sbjct: 1354 QAEVVHRTLPRGAKVHHLMRFTIPESEYVAREAHFSMLLNHPNVDAV 1400



 Score =  231 bits (590), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 175/629 (27%), Positives = 285/629 (45%), Gaps = 102/629 (16%)

Query: 1408 ADPEVEVLGWQQNAAKIGMQRCAASSQWFNERISLARYAHI------------------- 1448
            A+  +  LGWQ  AA+  +     +S W +  I LA +  I                   
Sbjct: 1595 AEDSMPALGWQPYAARRMVNCYLRTSVWLSRWIELAAHLDIPLGNMARDFAIFGSDLDMA 1654

Query: 1449 ---------LWISDDGVPDLGGTSEEDECF------ADEVHQPVLTYPGAYRKVSVELKI 1493
                     LW S    PDLGG   ED+        A++     +T PGAY  V +E+++
Sbjct: 1655 RRLQQNDMVLWWSPSPRPDLGG--REDDAHPGGGGAAEDWDALEVTNPGAYANVCLEVQV 1712

Query: 1494 HHLSVNALLKSNQVNEMEGGGLFGFDQDMNSGPYNNELCGFDETTSSAPAFRVVKQLIQR 1553
              L++N +L++  V+ MEG G                    D  + S   +   +  +  
Sbjct: 1713 TDLALNCVLQNASVHAMEGIGAASM--------------ALDTASHSLDEYARGQVPVSA 1758

Query: 1554 CLTDAVTSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEFRKLGA 1613
             L DAV +   F+                        R +H++M+K    LLA+ R+LG 
Sbjct: 1759 DLGDAVLTSQTFSTVRSM-------------------RFVHRLMRKTMLQLLADLRRLGV 1799

Query: 1614 TIIFANFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLFMDQYN 1673
             +++A++S++++ T +    +A AY   L+ A  T ++F  I L  VH W  L+F+D  N
Sbjct: 1800 QVVYASYSRLLLLTNRPTAGSAVAYGRYLMSAATTPDVFRHINLSIVHIWEYLIFLDMAN 1859

Query: 1674 YGGIPARADESLDDDSQVDIVSSWNIAEYLPKEIQDHFVLVVSEFMYIPWKHAQKLAA-- 1731
             GG+ A   E+ D    VDI  +WN+  +LP+ +QD F  +V  F+Y  ++  + + A  
Sbjct: 1860 MGGVIAHEPETTDLPEDVDIEMAWNVQAFLPQALQDRFAKIVGVFIYELYQAKRIMHARF 1919

Query: 1732 ---------SRASLQEGSSCTPSITVAAAENFESHIVQYVKGEISSYFTGKLLSIVRDAI 1782
                     S+ +    S+   +     AE+ ES   Q+   E + +    +++      
Sbjct: 1920 AERPVMRVLSQNTQPAESAAAAAAAAGMAEDKES--PQHASSENAQHIVAHVMT-----P 1972

Query: 1783 HHMKKMNNDQHNSPGVMQTAA---------NIHKVDAPLEFIKHVCAAFALDQNVQHDVL 1833
              ++ +N  Q    G M   A         ++   +  LEFIK      AL ++   +  
Sbjct: 1973 RLLRAVNEIQEEQKGPMDAEAWRFPQLPGSHLTMTNPTLEFIKATTRVLALQKDAALEAQ 2032

Query: 1834 VMRKNLLKYVRVREFAPEAEFRDPCPSFILPNVICSYCNDCRDLDLCRDMALLA----QD 1889
            V ++NLL  + VREF+P AE+ +PC  F LP VIC +CND R LDLCRD  L++    + 
Sbjct: 2033 VCKRNLLDLIGVREFSPAAEWHNPCLPFRLPWVICHFCNDDRTLDLCRDPDLISAREDRQ 2092

Query: 1890 WHCAMPQCGQPYDREVMENALLQIVRQRERLYHLQDLVCIRCNQVKAAHLAEQCACAGSF 1949
            W C   +C   YDR  +E  L+ +V+Q+   + +QDL C RC ++  ++LA  C C+GS+
Sbjct: 2093 WACT--RCNTLYDRTNIELRLITLVQQQVAQHAVQDLHCNRCGRINTSNLASYCICSGSW 2150

Query: 1950 RCKEDASDFRSKMQIFLNIANRQGFQLLQ 1978
              K   +D R ++   L IA    F LL+
Sbjct: 2151 VHKTSPADTRRRLLHALAIAQFHAFPLLE 2179


>gi|444314425|ref|XP_004177870.1| hypothetical protein TBLA_0A05580 [Tetrapisispora blattae CBS 6284]
 gi|387510909|emb|CCH58351.1| hypothetical protein TBLA_0A05580 [Tetrapisispora blattae CBS 6284]
          Length = 2236

 Score = 1319 bits (3413), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 669/1377 (48%), Positives = 917/1377 (66%), Gaps = 97/1377 (7%)

Query: 42   RLGWLLTFASSSLEDE---------DTRKVYSC----IDLYFVSQDGSTFKSKYKFRPYF 88
            R+GWL      +L  E          T  + S     +D YF+ ++G +FK+   + PYF
Sbjct: 86   RVGWLTNMHPVTLPQEVISGGQTKSSTNNMNSGGIAGVDFYFLDEEGGSFKATINYDPYF 145

Query: 89   YAATKEKMEMD-VEAYLRRRYESQIADIEILEKEDLDLKNHLSGLHKSYLKISFDTVQQL 147
            +    +   ++ +E +L++  E+ +  IEI+ KEDL L NHL GL ++ LK++F     L
Sbjct: 146  FVICNDVTRINEMEEFLKKFLETCLKSIEIITKEDLSLDNHLVGLKRTLLKLNFVNSNNL 205

Query: 148  MDVKKDLLHVVERNQAKFDAAEAYESIL--------TGKREQRPQDFLDCIVDLREYDVP 199
             + +K L  ++  N       + Y+  +            E+   D  + + D++EYDVP
Sbjct: 206  FEARKLLRPILTENSNTKRQRDIYKKNIHTFNTTTNNNNIEKELPDIKESLDDIKEYDVP 265

Query: 200  YHIRFAIDNDVRCGQWYDVSISSTGPLLEKRVDLLQRAEVHVCAFDIETTKLPLKFPDAD 259
            YH+R +ID ++R G+WY V+I   G   E  VD +  A+  V AFDIETTK PLKFPD+ 
Sbjct: 266  YHVRVSIDKNIRVGKWYKVTI---GGFFE--VDKVVFADPVVLAFDIETTKPPLKFPDSS 320

Query: 260  YDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNVNNEIELLRLWFA 319
             D +MMISYM+DG+GYLI NRE + EDIED EY+PKPE++G F + N ++E+ LL+ +F 
Sbjct: 321  VDQVMMISYMIDGEGYLITNREIISEDIEDFEYSPKPEYQGNFTIFNEDDELALLQRFFE 380

Query: 320  HMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDKNQGECRAKFACHLDCF 379
            H+++V+P +  T+NGD+FDWPF++TRA  HG  M +E+GF  D ++GE ++ +  H+DCF
Sbjct: 381  HIRDVRPTVIATFNGDFFDWPFIDTRAKFHGLDMFDEIGFAVD-SEGEYKSSYCSHMDCF 439

Query: 380  AWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQMMASYSVSDAVATYY 439
             WVKRDSYLPQGSQGLKAVT+AKLGY+P+E++PE M  +A EKPQ ++ YSVSDAVATYY
Sbjct: 440  RWVKRDSYLPQGSQGLKAVTQAKLGYNPIELDPELMTPYAYEKPQHLSEYSVSDAVATYY 499

Query: 440  LYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVICPNKHQSDPEKFY 499
            LYM YVHPF+FSL TIIP++PDEVLRKG+GTLCEMLLMVQAY+ N++ PNKH    E+FY
Sbjct: 500  LYMKYVHPFVFSLCTIIPLNPDEVLRKGTGTLCEMLLMVQAYQCNILLPNKHTDPIERFY 559

Query: 500  RNHLLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQLLNNLDRDLQYAIKVEGKMD 559
              HLLESETY+GGHVE LE+GVFRSD+P  FK+DP+  ++LL++L   L++ ++VE K  
Sbjct: 560  DGHLLESETYVGGHVESLEAGVFRSDIPNDFKIDPNMIDELLDDLPNALKFCVEVENKAK 619

Query: 560  LESVSNYDEVKNAIMEKLLRLQEEPIREECPLIYHLDVAAMYPNIILTNRLQPPSIVTDE 619
            +  V N+DE++  + + LL L+ +P R E PLIYH+DVA+MYPNI++TNRLQP S+ T+ 
Sbjct: 620  IGDVINFDEIQKQVKDSLLALKNDPKRYELPLIYHVDVASMYPNIMITNRLQPDSMKTER 679

Query: 620  VCTACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYYHLKKQIESEFVDGTNGHLSKSFL-- 677
             C +CDFNRPGK C R+L+W WRGE F  K  +Y  +K+ +++E     N +  K FL  
Sbjct: 680  DCASCDFNRPGKRCDRRLKWAWRGEYFPAKMDEYNMIKRALQNEVFPNKNKNSKKEFLTF 739

Query: 678  -DLPKMEQQSRLKDRLKKYCQKAYKRVLDKPVTELREAGICMRENSFYVDTVRSFRDRRY 736
             +L   +Q + +K RL  YC+K Y R     V E REA +C REN FY +TVRSFRDRRY
Sbjct: 740  DELSYSDQVAHIKKRLTDYCKKVYSRTKVSEVVE-REAIVCQRENPFYANTVRSFRDRRY 798

Query: 737  EYKGLNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHKCILNSFYGYVMRKGARW 796
            ++KGL K WK KL+         + +EA+  +VLYDSLQLAHK ILNSFYGYVMRKG+RW
Sbjct: 799  DFKGLAKTWKQKLAAIDKEDTHAR-EEAKKTIVLYDSLQLAHKVILNSFYGYVMRKGSRW 857

Query: 797  YSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLPGSFPENFTFKTKDLKKK 856
            YSMEMAG+   TGA IIQ AR ++EK+G+PLELDTDGIWC+LP SFPEN+ FK ++  KK
Sbjct: 858  YSMEMAGITCLTGATIIQMARSVVEKVGRPLELDTDGIWCILPKSFPENYFFKLEN-GKK 916

Query: 857  LTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEFEVDGPYKAMILPASKE 916
            L +SYPC MLN  V +  TN QYQTLVDP+   YETHSE SI FEVDGPYKA+ILP SKE
Sbjct: 917  LYMSYPCSMLNYKVHQKFTNHQYQTLVDPIKHKYETHSENSIFFEVDGPYKAIILPTSKE 976

Query: 917  EGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFLHGSTIEECYSAVA 976
            EG  IKKRYAVFNDDG+LAELKGFE+KRRGEL+LIK FQ+++F  FL G T+E CY AVA
Sbjct: 977  EGKGIKKRYAVFNDDGSLAELKGFELKRRGELQLIKNFQSDIFKVFLDGDTLENCYKAVA 1036

Query: 977  AVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLADYGEQKSCAVTTARRLSDFLGDT 1036
            AVANRWLD+LD++G+ + D +LI  I E+ +MSK+L +Y  QKS ++TTA+RL  FLG+ 
Sbjct: 1037 AVANRWLDVLDSKGQMLEDEDLISLICENRSMSKTLKEYEGQKSTSITTAKRLGQFLGED 1096

Query: 1037 MVKDKGLRCQYIVACEPQGTPVSERAVPVAIFETDAEIMKFYLRKWC--KTSSDVGIRSI 1094
            MVKDKGL+C+YI++ +P   PV+ERA+PVAIF TD +  + +LR+W    T  +  IR+I
Sbjct: 1097 MVKDKGLQCKYIISTKPLNAPVTERAIPVAIFSTDIDTKRTFLRRWTMDPTLDNFDIRTI 1156

Query: 1095 VDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLYKKVREKEDKFRQRKLVDIF 1154
            +DW YY++R++S +QKII+IPAA+Q VSNPVPRV HP+WL KK+ ++EDKF+Q  L   F
Sbjct: 1157 IDWEYYRERVASVVQKIISIPAALQNVSNPVPRVQHPEWLQKKISQQEDKFKQSSLTKFF 1216

Query: 1155 SSLKKDDFLNKTCNAETNLMDENVEDLEDFPKK--RRNSVNGPRPIVRCFEVNNEQKTVK 1212
            S+ K    + +            ++D+ED  K     N +N    I +  +++  + T K
Sbjct: 1217 STTKIPPKIGQ------------LKDIEDLFKATDENNGIN----IKKVAKISTRKMTPK 1260

Query: 1213 TTDQVDSLRQQLEPSEVSDQQPSSQNAIDTENIDRIVDYKGWLELKKRKWK-DNLDRRKK 1271
               Q     ++L+  E S   PS   +ID        DY+ WL  +K KWK    DR+++
Sbjct: 1261 RRRQ-----EELKNEEASLVLPSEMPSIDD-------DYEAWLGYQKIKWKIQARDRKRR 1308

Query: 1272 QKLGSLRASHQANGVSESLGDMINHKEAQRRTGVGSYFRRQETAMTRCHWQIIQLVPSSQ 1331
             +L    AS+  +G                RT +G+  RRQ  + ++  W+I+Q   SS+
Sbjct: 1309 AQL--FGASNSGSG----------------RTALGNMVRRQAESYSKSVWEILQYKSSSE 1350

Query: 1332 SGVFLAWVVVEGIMVRIPITVPRLFYLNSKDPIVEKFPGRRVNKTLPHGRRSFNLIE 1388
             G+   +V + G +  +   VP++ Y+  K            N  LPHG+ +  ++E
Sbjct: 1351 PGIVDVYVTINGKIQTLKFKVPKIIYIKVK------------NNLLPHGKINHCMVE 1395



 Score =  206 bits (524), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 147/602 (24%), Positives = 273/602 (45%), Gaps = 53/602 (8%)

Query: 1415 LGWQQNAAKIGMQRCAASSQWFNERISLARYAHI-------------------------- 1448
            L WQ    K   Q   +   W+   ++L++Y++I                          
Sbjct: 1643 LNWQGTMTKRISQYLVSLGSWYAHLLALSKYSNIPLCNLQLDNMGYVIDVIYARKLKREG 1702

Query: 1449 --LWISDDG-VPDLGGTSEEDECFA----DEVHQPVLTYPGAYRKVSVELKIHHLSVNAL 1501
              +W +++G +PDLGG  ++ +       + +  P +  P  Y  V +E+ I +L VN +
Sbjct: 1703 IIIWWNENGPLPDLGGKQKDFDINTSWTMNNLQFPRINVPDVYDNVILEIDIKNLVVNTV 1762

Query: 1502 LKSNQVNEMEGGGLFGFDQDMNSGPYNNELCGFDETTSSAPAFRVVKQLIQRCLTDAVTS 1561
            L     N+ EG  +     +      N +   F +   S P+  V++ +++    DA+  
Sbjct: 1763 LGITLFNDAEGSDMANASLNNTEDSVNGQSSTFIQDAFSGPSLLVLRNMLKDWWDDAMKQ 1822

Query: 1562 GNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEFRKLGATIIFANFS 1621
             N  AD ++  L  W+ +P SKL D  L   ++ + +K    L+ EF  LG ++++A+ +
Sbjct: 1823 -NSIADLLVNSLIAWVQNPDSKLFDGTLRYHINNLSKKAMLQLMNEFYSLGGSVVYADRN 1881

Query: 1622 KVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLFMDQYNYGGIPARA 1681
            K+ I T KF    + AY   ++KA++T   F ++EL  V +W  L++MD+YN+GG+    
Sbjct: 1882 KLFIKTTKFAPENSYAYGQYMMKAIRTNPCFNYLELNIVRYWDLLIWMDKYNFGGLACNT 1941

Query: 1682 DESLDDDSQ-VDIVSSWNIAEYLP----KEIQDHFVLVVSEFMYIPWKHAQKLAASRASL 1736
             E  D D Q     S W I ++LP     E +D  ++++   +       +K   ++   
Sbjct: 1942 IE--DRDKQDFRAYSQWQIKKFLPIALQAEFEDWIMIILDSMLRTKRSFFEKDVNTQRLT 1999

Query: 1737 QEGSSCTPSITVAAAENFESHIVQYVKGEISSYFTGKLLSIVRDAIHHMKKMNNDQHNSP 1796
            Q G      I   +     S    + K  I     GKL    +++  +     ++++  P
Sbjct: 2000 QLGPQSKQDIDEDSEGPLASFTDIFAKSLIQR--VGKLFRTQQESALYY----SEEYKFP 2053

Query: 1797 GVMQTAANIHKVDAPLEFIKHVCAAFALDQNVQHDVLVMRKNLLKYVRVREFAPEAEFRD 1856
             +  +  ++   +  L F+K +C    L +    +V  +RK LLK   VREF   AEF +
Sbjct: 2054 ELPGSYLDMR--NPVLVFVKFLCHIMLLSKKNTLEVRSLRKELLKTFEVREFHKSAEFVN 2111

Query: 1857 PCPSFILPNVICSYCNDCRDLDLCRDMALLAQDWHCAMPQCGQPYDREVMENALLQIVRQ 1916
            P  S  L N +C +C    DLD+C++     + ++C   +C +P ++  +E  L+Q +  
Sbjct: 2112 PSTSLELANCLCEHCYFTTDLDMCKEEP--GRLFNCE--RCQKPRNKTQIEEYLIQNLTT 2167

Query: 1917 RERLYHLQDLVCIRCNQVKAAHLAEQCACAGSFRCKEDASDFRSKMQIFLNIANRQGFQL 1976
              + Y  QD  C++C+ ++  +++  C C+G +            +++F N+A   GF  
Sbjct: 2168 GIQSYLSQDSRCVKCHTIRVDYMSPHCKCSGKWGNVTSHESILETIKVFDNVATFFGFTH 2227

Query: 1977 LQ 1978
            LQ
Sbjct: 2228 LQ 2229


>gi|254564619|ref|XP_002489420.1| Catalytic subunit of DNA polymerase (II) epsilon [Komagataella
            pastoris GS115]
 gi|238029216|emb|CAY67139.1| Catalytic subunit of DNA polymerase (II) epsilon [Komagataella
            pastoris GS115]
          Length = 2206

 Score = 1318 bits (3410), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 664/1424 (46%), Positives = 928/1424 (65%), Gaps = 77/1424 (5%)

Query: 16   KQKLIRSAEEELEAKLGYDLFSEGDKRLGWLLTFASSSLEDEDTRKVYSCIDLYFVSQDG 75
            K  L++ A++ +++  G+D +  G K++GWL+   ++++  ED  + YS +D YF+ ++G
Sbjct: 46   KLSLVQEADQ-IDSVFGFDRYESGPKKVGWLINMHTTTIPSEDLLQGYSGVDYYFLDEEG 104

Query: 76   STFKSKYKFRPYFYAATKEKMEMDVEAYLRRRYESQIADIEILEKEDLDLKNHLSGLHKS 135
              FK   ++ PYF+   K+  E +VE YLR++ E  +     +EK+DL L NHL GL ++
Sbjct: 105  GGFKVTKQYDPYFFVICKKSYESEVEEYLRKQLEGLLKKASRVEKDDLSLPNHLIGLKRT 164

Query: 136  YLKISFDTVQQLMDVKKDLLHVVERNQAKFDAAEAYESILT-------------GKREQR 182
             +++SF  +  L++ ++ +  +V++NQ   +  + Y S L               + + +
Sbjct: 165  LIQLSFHNISNLLEARRIIAPIVKQNQLFKEQRDVYNSDLNYNLLNEEEDLDFNTESKSK 224

Query: 183  PQDFLDCIVDLREYDVPYHIRFAIDNDVRCGQWYDVSISSTGPL-LEKRVDLLQRAEVHV 241
            P D   C+ D+REYDVPYH+R +IDN+ R G+WY +  + +  +   +  D +  A+  +
Sbjct: 225  PLDIAHCLEDIREYDVPYHVRVSIDNNYRIGKWYTLEATDSAQVSFTEMKDKIAFADPVI 284

Query: 242  CAFDIETTKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGY 301
             AFDIETTK PLKFPD+  D IMMISYM+DG+G+LI NRE +  +IED EYTPKPE+ G 
Sbjct: 285  LAFDIETTKAPLKFPDSSIDQIMMISYMIDGEGFLITNREIINAEIEDFEYTPKPEYPGL 344

Query: 302  FKVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQC 361
            F + N  +E  L+  +F H++EV+P +  T+NGD+FDWPF+E RA  HG  M  E+GF  
Sbjct: 345  FTIFNEPDEKALIERFFEHIREVRPTVIATFNGDFFDWPFVEKRAFFHGIDMFREIGFAK 404

Query: 362  DKNQGECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKE 421
            D  + E ++K+  H+DC+ WVKRDSYLPQGSQGLKAVT  KLGY+P E++PE M  +A E
Sbjct: 405  DV-EDEYKSKYCVHMDCYRWVKRDSYLPQGSQGLKAVTTVKLGYNPTELDPELMTPYAYE 463

Query: 422  KPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAY 481
            KPQ++A YSVSDAVATYYLY  YVHPF+FSL TIIP++PDEVLRKG+GTLCEMLLMVQAY
Sbjct: 464  KPQLLAEYSVSDAVATYYLYYKYVHPFVFSLCTIIPLNPDEVLRKGTGTLCEMLLMVQAY 523

Query: 482  KANVICPNKHQSDPEKFYRNHLLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQLL 541
            + N++ PNKH    E+FY  HL+ESETY+GGHVE LE+GVFRSD+ T F++DP+A +++L
Sbjct: 524  ENNILLPNKHTDPLERFYEGHLIESETYVGGHVESLEAGVFRSDISTDFRIDPTAIDEIL 583

Query: 542  NNLDRDLQYAIKVEGKMDLESVSNYDEVKNAIMEKLLRLQEEPIREECPLIYHLDVAAMY 601
            + LD+ L+++I+VE K  L+ ++NYDE+ + I  +LL L+  P R E PLIYH+DVA+MY
Sbjct: 584  STLDQSLKFSIEVESKKQLKDITNYDEIYDKIKGELLELKNNPKRHEAPLIYHVDVASMY 643

Query: 602  PNIILTNRLQPPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYYHLKKQIE 661
            PNI+ TNRLQP S+ TD+ C  CDFNRPGKTC R+L W WRGE +    S+Y  ++  + 
Sbjct: 644  PNIMTTNRLQPDSMKTDQDCAECDFNRPGKTCDRRLLWAWRGEFYPADYSEYKMIEHALS 703

Query: 662  SE-FVDGTNGHLSKSFLDLPKMEQQSRLKDRLKKYCQKAYKRVLDKPVTELREAGICMRE 720
            ++ F         K+F  L  +++ + +K  L +Y +K Y R+      E +EA +C RE
Sbjct: 704  NDTFAPDKPWLPRKTFDQLSHIQRAALVKSNLSEYSRKVYHRIKQTKTIE-KEAIVCQRE 762

Query: 721  NSFYVDTVRSFRDRRYEYKGLNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHKC 780
            N FYV+TVRSFRDRRYE+KGL KVWKGK S+         + EA+ M+VLYDSLQLAHK 
Sbjct: 763  NPFYVNTVRSFRDRRYEFKGLAKVWKGKASKIPKDDRH-SLDEAKKMIVLYDSLQLAHKV 821

Query: 781  ILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLPG 840
            ILNSFYGYVMRKG+RWYS+EMAG+   TGA IIQ AR L+E++G+PLELDTDGIWC+LP 
Sbjct: 822  ILNSFYGYVMRKGSRWYSVEMAGITCLTGATIIQLARSLVERLGRPLELDTDGIWCILPS 881

Query: 841  SFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEF 900
            SFPE+F FK KD  K LT+SYPC MLN  V    TN QYQ LVDPV+  Y+T+S+ SI F
Sbjct: 882  SFPEDFDFKMKD-GKTLTVSYPCSMLNFLVHEKFTNHQYQELVDPVTHKYKTYSDNSIFF 940

Query: 901  EVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFD 960
            E+DGPYKAMILP SKEEG  +KKRYAVFN DG+LAELKGFE+KRRGEL+LIK FQ+++F 
Sbjct: 941  ELDGPYKAMILPTSKEEGKGLKKRYAVFNFDGSLAELKGFELKRRGELQLIKNFQSDIFK 1000

Query: 961  KFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLADYGEQKS 1020
             FLHG T+E CY  VA VANRWLD+LD++G ++ D +LI+ I E+ +MSK+LA+YG QKS
Sbjct: 1001 LFLHGDTLEGCYQTVANVANRWLDVLDSKGVNVEDEDLIELICENRSMSKTLAEYGTQKS 1060

Query: 1021 CAVTTARRLSDFLGDTMVKDKGLRCQYIVACEPQGTPVSERAVPVAIFETDAEIMKFYLR 1080
             ++TTARRL +FLG+ MVKDKGL C+Y++A  P   P++ERAVPV IF +D EI K +LR
Sbjct: 1061 TSITTARRLGEFLGEEMVKDKGLACKYVIANRPLNAPITERAVPVTIFSSDTEIKKRFLR 1120

Query: 1081 KWCKTSS--DVGIRSIVDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLYKKV 1138
            +W   +S  +   R+I+DW YY +RL+S +QKIITIPAA+Q +SNPVPR+ HP+WL KKV
Sbjct: 1121 RWLGDNSLDNFDPRTIIDWEYYTERLASVVQKIITIPAALQNISNPVPRIAHPEWLQKKV 1180

Query: 1139 REKEDKFRQRKLVDIFSSLKKDDFLNKTCNAETNLMDENVEDLEDFPKKRRNSVNGPRPI 1198
              + D  +Q  L   F      D +    N          +D+EDF        NG    
Sbjct: 1181 NSQNDSKKQSSLAQFFGKTTNSDIMKDISN--------RFKDIEDFGA----DTNGM--- 1225

Query: 1199 VRCFEVNNEQKTVKTTDQVDSLRQQLEPSEVSDQQPSSQNAIDTENIDRIVDYKGWLELK 1258
                     +K  K T +    +Q+   S +++++   Q  ++ +  + +VDY  +L+ +
Sbjct: 1226 --------SRKMGKVTSR--KRKQKELESRIAEKE---QKLLEEDCPNELVDYGSFLKYQ 1272

Query: 1259 KRKWK-DNLDRRKKQKLGSLRASHQANGVSESLGDMINHKEAQRRTGVGSYFRRQETAMT 1317
            K KWK  + +R +++KL    A+    G                   +G+  R++  +  
Sbjct: 1273 KAKWKLQSQNRERRRKLFGASANTATRGT------------------IGNIMRKKAESYV 1314

Query: 1318 RCHWQIIQLVPSS--QSGVFLAWVVVEGIMVRIPITVPRLFYLNSKD------PIVEKFP 1369
               WQ++Q    S  + G   A V ++G +    I VP+  +L  K        I ++  
Sbjct: 1315 GSSWQVLQYKHDSTCKPGEVKALVFIDGRVQTFTIAVPKKVFLGLKTTDLGSLSIPDECT 1374

Query: 1370 GRRVNKTLPHGRRSFNLIEVMIDEDQFRKESKKLAALLADPEVE 1413
                   LP G +  NL ++ + E++F  E      L    +V+
Sbjct: 1375 VEPSTNHLPKGEKVENLFKLTMSEEKFNAERGNCNGLFQHEDVK 1418



 Score =  230 bits (587), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 150/554 (27%), Positives = 281/554 (50%), Gaps = 45/554 (8%)

Query: 1448 ILWISDDGVPDLGGTSEEDECFAD---EVHQPVLTYPGAYRKVSVELKIHHLSVNALLKS 1504
            +LW S + +PD GG  E D+  A+    +  P +  P  Y  V +EL + +L++N +L S
Sbjct: 1676 VLWWSPNPLPDHGGF-ELDQSMANIEKSLEFPTINKPEIYETVCLELNLSNLTINTILTS 1734

Query: 1505 NQVNEMEGGGLFGFDQDMNSGPYNNELCGFDETTSSAPAFRVVKQLIQRCLTDAVTSGNV 1564
              +NE EG         +  G  N     F E   S PA + ++ L++    DA+   NV
Sbjct: 1735 ALINEAEG---------LEIGD-NENTTSFAEDIFSTPALQALRFLLKSWWDDAL-KNNV 1783

Query: 1565 FADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEFRKLGATIIFANFSKVI 1624
             AD ++ +   W+    S L+DP L   ++ + +K    LL EF++LG+TIIFAN +K++
Sbjct: 1784 DADIMVFNFMSWVEKTSSYLYDPSLLYHVYNLTKKSLLHLLGEFKRLGSTIIFANRNKIV 1843

Query: 1625 IDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLFMDQYNYGGIPARADES 1684
            + T K  +  + AY   ++K ++++ +F ++E + V +W  L++MDQYNYGG    A+ +
Sbjct: 1844 LKTSKLLVENSYAYGQYIIKTVRSKSMFSYLEFQVVRYWDMLIWMDQYNYGG-NGCAEIT 1902

Query: 1685 LDDDSQVDIVSSWNIAEYLP----KEIQDHFVLVVSEFM---YIPWKHAQKLAASRASL- 1736
             ++   +++++ W + ++LP    +E +D  V+++  F+    +    +Q     R +  
Sbjct: 1903 SNEKQDLELINHWQLQQFLPPVLQQEFEDWVVVILDSFLKCKQLDLNGSQSNGTPRQTQI 1962

Query: 1737 --------QEGSSCTPSITVAAAENFESHIVQYVKGEISSYFTGKLLSIVRDAIHHMKKM 1788
                    Q+ S  T  +      N        ++  I +    +L +++  A+      
Sbjct: 1963 QHILKKQNQQQSLSTDFVYEKPENNIIDMFGNVLEKRIITLKERQLRTLLNPALKA---- 2018

Query: 1789 NNDQHNSPGVMQTAANIHKVDAPLEFIKHVCAAFALDQNVQHDVLVMRKNLLKYVRVREF 1848
               ++  P +  +  ++   D  LEF+K +C   +L ++   +V V+R+N+LK   V+EF
Sbjct: 2019 ---EYEFPKLAGSQLDLS--DPTLEFVKFLCHILSLSKSRNIEVRVLRRNILKLFDVKEF 2073

Query: 1849 APEAEFRDPCPSFILPNVICSYCNDCRDLDLCRDMALLAQDWHCAMPQCGQPYDREVMEN 1908
            + EA F++P  S  L NV C  CN   DLDLCRD     + ++C    C + +++  +E 
Sbjct: 2074 SAEATFKNPSASLRLYNVHCEICNHITDLDLCRDTE--TEIFNCQ--NCKRRFNKLALEE 2129

Query: 1909 ALLQIVRQRERLYHLQDLVCIRCNQVKAAHLAEQCACAGSFRCKEDASDFRSKMQIFLNI 1968
             L+    +    ++ QDL C +C++++++ L   C+C+GS+    +  D   +M+ F  +
Sbjct: 2130 RLIADAHKLLVHFYNQDLKCSKCHKLRSSELQLYCSCSGSWIGTVNRGDIVKRMKTFHTV 2189

Query: 1969 ANRQGFQLLQECTS 1982
            A    F +L+E T+
Sbjct: 2190 ARFYDFNMLKEVTT 2203


>gi|83766085|dbj|BAE56228.1| unnamed protein product [Aspergillus oryzae RIB40]
          Length = 2248

 Score = 1316 bits (3407), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 690/1410 (48%), Positives = 926/1410 (65%), Gaps = 111/1410 (7%)

Query: 27   LEAKLGYDLFSEGDKRLGWLLTFASSSLEDEDTRKVYSCIDLYFVSQDGSTFKSKYKFRP 86
            ++  LG+  F  G+KR+GWL    S+S+ED +     + +D YF+  +G +FK+  ++ P
Sbjct: 117  IDESLGFPRFESGEKRVGWLTNMHSTSVEDPNIPGGRAGVDYYFLEDNGGSFKATVEYDP 176

Query: 87   YFYAATKEKMEMDVEAYLRRRYESQIADIEILEKEDLDLKNHLSGLHKSYLKISFDTVQQ 146
            YF  A K+  E +VE + RR +E  I  +  +EKEDL L NHL G  +++L++ F  V  
Sbjct: 177  YFLIAVKKGHEAEVEEWCRRMFEGLIKKVTRVEKEDLKLPNHLLGHRRTFLQMYFANVSH 236

Query: 147  LMDVKKDLLHVVERNQAKFDAAEAYESILTGKREQRPQDFLDCIVDLREYDVPYHIRFAI 206
            L++V++ LL + E+N+   +  + Y  I                V LR            
Sbjct: 237  LLEVRRTLLPLAEKNKKNVNVMDTYVEI-------------SRFVGLR------------ 271

Query: 207  DNDVRCGQWYDVS-----ISSTGPLLEKRVDLLQRAEVHVCAFDIETTKLPLKFPDADYD 261
                   +WY V      IS T   +E+RV   QR +  V AFDIETTKLPLKFPD+  D
Sbjct: 272  -------KWYTVEAKHGVISLT--CIEERV---QRPDPVVLAFDIETTKLPLKFPDSVID 319

Query: 262  IIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNVNNEIELLRLWFAHM 321
             IMMISYM+DGQG+LI NRE V EDI D EYTPKPE+ G F + N  +E  +L  +F H+
Sbjct: 320  QIMMISYMIDGQGFLITNREIVSEDINDFEYTPKPEYYGPFMIFNEPDERSVLERFFGHI 379

Query: 322  QEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDKNQGECRAKFAC-HLDCFA 380
            +E KP +  TYNGD+FDWPF+E RA+  G  M  E+GF+  KN  +      C H+DCFA
Sbjct: 380  KEAKPTVIATYNGDFFDWPFVEARASVLGIDMYTEIGFR--KNSEDIYQSDHCVHMDCFA 437

Query: 381  WVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQMMASYSVSDAVATYYL 440
            WV RDSYLPQGS+GLKAVT AKLGYDP E++PE M  +A E+PQ +A YSVSDAVATYYL
Sbjct: 438  WVNRDSYLPQGSRGLKAVTVAKLGYDPDELDPELMTPYASERPQTLAEYSVSDAVATYYL 497

Query: 441  YMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVICPNKHQSDPEKFYR 500
            YM YVHPFIFSL TI+P++PD+ LRKG+GTLCEMLLMVQAY+  ++ PNKH+  PE FY 
Sbjct: 498  YMKYVHPFIFSLCTIVPLNPDDTLRKGTGTLCEMLLMVQAYQGEIVLPNKHKEPPEAFYE 557

Query: 501  NHLLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQLLNNLDRDLQYAIKVEGKMDL 560
             HLLESETY+GGHVE +E+GVFRSD+P +FK+DP+A ++LL +LD  L+++I+VE K  L
Sbjct: 558  GHLLESETYVGGHVESIEAGVFRSDIPVTFKIDPTAIDELLRDLDAALKFSIEVEEKKSL 617

Query: 561  ESVSNYDEVKNAIMEKLLRLQEEPIREECPLIYHLDVAAMYPNIILTNRLQPPSIVTDEV 620
            + V NY+EVK  I + L+ L+E P R+E P IYHLDVA+MYPNII TNRLQP +++ +  
Sbjct: 618  DDVVNYEEVKGQISKLLIALKENPNRDENPFIYHLDVASMYPNIITTNRLQPDAMIQESN 677

Query: 621  CTACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYYHLKKQIESE-FVDGTNGHLSKSFLDL 679
            C ACDFNRPGKTC R++ W WRGE    KR +Y  +++ + +E F   T     + F D+
Sbjct: 678  CAACDFNRPGKTCDRRMPWAWRGEFLPAKRDEYNMVRQAVANERFPGKTKNSPMRLFSDM 737

Query: 680  PKMEQQSRLKDRLKKYCQKAYKRVLDKPVTELREAGICMRENSFYVDTVRSFRDRRYEYK 739
               EQ + +K RL+ Y +K Y ++ D   T +REA IC REN FYV+TVR+FRDRRY++K
Sbjct: 738  SAEEQSAIVKKRLQDYSKKIYHKIHDSK-TIVREAIICQRENPFYVNTVRNFRDRRYDFK 796

Query: 740  GLNKVWKGKLSEAKASGNSIK-IQEAQDMVVLYDSLQLAHKCILNSFYGYVMRKGARWYS 798
            G  KVWK K    K+SG S   I+EA+ M++L+DSLQLAHK ILNSFYGYVMRKG+RWYS
Sbjct: 797  GKQKVWKNKTDSLKSSGASAADIEEAKKMIILFDSLQLAHKVILNSFYGYVMRKGSRWYS 856

Query: 799  MEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLPGSFPENFTFKTKDLKKKLT 858
            +EMAGV   TGA+IIQ AR L+E+IG+PLELDTDGIWC+LPGSFPENF+F  K+  KKL 
Sbjct: 857  LEMAGVTCLTGARIIQMARELVERIGRPLELDTDGIWCMLPGSFPENFSFTLKN-GKKLG 915

Query: 859  ISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEFEVDGPYKAMILPASKEEG 918
            ISYPCVMLN  V  + TN QYQTLVDP +  YETHS+ SI FEVDGPYKAMILP SKEE 
Sbjct: 916  ISYPCVMLNHLVHGSYTNHQYQTLVDPKTFRYETHSDNSIFFEVDGPYKAMILPTSKEED 975

Query: 919  ILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFLHGSTIEECYSAVAAV 978
              +KKRYAVFN DG+LAELKGFE+KRRGELKLIK+FQ ++F  FL G+++EE Y+AVA V
Sbjct: 976  KNLKKRYAVFNHDGSLAELKGFEVKRRGELKLIKIFQTQIFKFFLEGTSLEETYAAVARV 1035

Query: 979  ANRWLDLLDNQGKDIADSELIDYISESSTMSKSLADYGEQKSCAVTTARRLSDFLGDTMV 1038
            A+RWLD+L   G  +AD ELI+ ISE+ +M+K+L +YG QKS ++TTARRL++FLG+ MV
Sbjct: 1036 ADRWLDVLYEHGATLADEELIELISENRSMTKTLEEYGSQKSTSITTARRLAEFLGEQMV 1095

Query: 1039 KDKGLRCQYIVACEPQGTPVSERAVPVAIFETDAEIMKFYLRKWCK-TSSDVGIRSIVDW 1097
            KDKGL C+YI++  P+ TPV+ERA+PVAIF  +  + +F+LRKW K    D   R+++DW
Sbjct: 1096 KDKGLNCKYIISARPRNTPVTERAIPVAIFSAEENVKRFFLRKWLKDDPGDCDPRTVIDW 1155

Query: 1098 SYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLYKKVREKEDKFRQRKLVDIFSSL 1157
             YY +RL S +QK+ITIPAA+QKV NPVPRV HPDWL +++  K+DKF+Q K+ D+F+  
Sbjct: 1156 DYYLERLGSVVQKLITIPAALQKVRNPVPRVAHPDWLQRRINVKDDKFKQIKMTDVFAKS 1215

Query: 1158 KKDDFLNKTCNAETNLMDENVEDLEDF-------PKKRRNSVNGPRPIVRCFEVNNEQKT 1210
            +K    N   +  TN++D  V+   D         +K ++S N      R      E  T
Sbjct: 1216 EK----NPLTDISTNILDHRVQHAGDIGEVIASSTEKLKSSPNSKTSQKRKLP---EGPT 1268

Query: 1211 VKTTDQVDSLRQQLEPSEVSDQQPSSQNAIDTENIDRIVDYKGWLELKKRKWKDNLDR-- 1268
              + D   SL  ++ P  ++D                  DY G+L+ +K+KWK       
Sbjct: 1269 KTSLDPFASLPSRMPP--MAD------------------DYVGFLKYQKQKWKIQKQARI 1308

Query: 1269 RKKQKLGSLRASHQANGVSESLGDMINHKEAQRRTGVGSYFRRQETAMTRCHWQIIQLVP 1328
            R++Q  G      + N  ++SL  +               FR Q   +    WQ++QL  
Sbjct: 1309 RRRQLFG-----ERTNIANDSLSHL---------------FRNQAELLYISTWQVLQLSE 1348

Query: 1329 SSQSGVFLAWVVVEGIMVRIPITVPRLFYLNSK-----DPIVEKFPGRRVNKTLPHGRRS 1383
            +++ G+  A+V+++  +  + + VPR  Y+N K     D  V      +VN TLP+G  S
Sbjct: 1349 TTRPGIVRAFVLIDKKIHTLTVKVPRQMYINLKRESLPDVDVPDCEVEKVNHTLPNGHPS 1408

Query: 1384 FNLIEVMIDEDQFRKESKKLAALLADPEVE 1413
             +L ++ + E+ + +E+ K+  LL  P +E
Sbjct: 1409 VHLFKLTLSEETYLREADKMDTLLQHPSIE 1438



 Score =  248 bits (634), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 172/629 (27%), Positives = 299/629 (47%), Gaps = 64/629 (10%)

Query: 1407 LADPEVEVLGWQQNAAKIGMQRCAASSQWFNERISLARYAHI------------------ 1448
            ++D ++  LGWQ   A+  +      S W      LARY  +                  
Sbjct: 1633 VSDMDLPPLGWQAFIARRLVTHYLYLSAWIQHLTMLARYGDVPLCNLESDDPRYLIDISY 1692

Query: 1449 ----------LWISDDGVPDLGGTSEEDECFA-DEVHQPVLTYPGAYRKVSVELKIHHLS 1497
                      LW S    PD  G  ++D     ++V  P +  P AY  V +EL++ +L+
Sbjct: 1693 ARRLQQNNVVLWWSSGPRPDHAGYEKDDITGPLEKVSMPSVNVPSAYTTVCIELEVRNLA 1752

Query: 1498 VNALLKSNQVNEMEGGGLFGFDQDMNSGPYNNELCGFDETTSSAPAFRVVKQLIQRCLTD 1557
            +N +L S+ +NEMEG        + ++    + +   ++  +SA A  V++++++   T+
Sbjct: 1753 INTILTSSIINEMEGADTLLASSEPSADSNGSGVLYSEKAFASAGAI-VLREMVKHWWTE 1811

Query: 1558 AVTSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEFRKLGATIIF 1617
            A   GN  AD ++QHL RW+ SP S L+D  LH  +  + +K F  L+AEFR++G+ IIF
Sbjct: 1812 AC-EGNNMADIMVQHLIRWVESPVSCLYDRSLHNYVRMLSRKSFQRLMAEFRRVGSNIIF 1870

Query: 1618 ANFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLFMDQYNYGGI 1677
            A+ +++++ T K ++  A AY   +LK+++    F +I+LE   +W  L++ D+YNYGG 
Sbjct: 1871 ASSTRLLLQTTKAEVGNAYAYSQYVLKSIRANPSFHFIDLEIKEYWDYLIWYDEYNYGGK 1930

Query: 1678 PARADESLDDDSQVDIVSSWNIAEYLPKEIQDHFVLVVSEFMYI--PWKHAQKLAASRAS 1735
              R +    D+ +++ V  W ++ +LP  +Q  F   V E++ +    KH +   +S   
Sbjct: 1931 GCR-EVVGSDEQELETVMHWQLSRFLPGPMQTIFHDWVVEYIDLMHGVKHPESADSSTPR 1989

Query: 1736 LQEGSSCTPS------ITVAAAENFESHIVQYVKGEISSYFTGKLLSIVRDAIHHMKKMN 1789
            + +     P+      ++   AE F   + + + G         L+   R+ + H +  +
Sbjct: 1990 MTQIPIGRPTDEDDDEVSAVLAEKFSKPLKKQISG---------LIRRQREEMLHPELAS 2040

Query: 1790 NDQHNS-PGVMQTAANIHKVDAPLEFIKHVCAAFALDQNVQHDVLVMRKNLLKYVRVREF 1848
            +      PGV+ +  N  K +  LE +K +    +L +    +  ++R+ LL    VREF
Sbjct: 2041 DYLFPVLPGVL-SDPNEEKRNPVLELVKMLMQVLSLSKTTSLENRLLRRELLAMFEVREF 2099

Query: 1849 APEAEFRDPCPSFILPNVICSYCNDCRDLDLCRDMALL-----------AQDWHCAMPQC 1897
            + E  F +P  S  LP + CS C   RDLDLCRD  +L            + W C  P C
Sbjct: 2100 SKEGRFENPAASLKLPELTCSACCLIRDLDLCRDEDVLPDPGSDPSKAVTKPWRC--PFC 2157

Query: 1898 GQPYDREVMENALLQIVRQRERLYHLQDLVCIRCNQVKAAHLAEQCACAGSFRCKEDASD 1957
               YDR   E  L+  V      +  QDL C +C  +K +   E C+C+G +    D ++
Sbjct: 2158 QTEYDRLAQEEILIGQVHGLIVGWQTQDLKCSKCGGLKVSEFMEHCSCSGKWVETMDRAE 2217

Query: 1958 FRSKMQIFLNIANRQGFQLLQECTSWILE 1986
               K+++  ++A   G +LL+     +LE
Sbjct: 2218 AEKKLRVLNSVAKFHGLKLLENVVEGVLE 2246


>gi|353236356|emb|CCA68352.1| probable POL2-DNA polymerase epsilon, calytic subunit A
            [Piriformospora indica DSM 11827]
          Length = 2263

 Score = 1315 bits (3403), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 684/1438 (47%), Positives = 914/1438 (63%), Gaps = 111/1438 (7%)

Query: 25   EELEAKLGYDLFSEGDKRLGWLLTFASSSLEDEDTRKVYSCIDLYFVSQDGSTFKSKYKF 84
            +E++ KLG+    EG  R GWL+    +++  ++     + +D YF+  DG  FK  Y +
Sbjct: 67   DEIDEKLGFGRVQEGSAREGWLVNMHPTTIRTDEWASGRAAVDFYFIQDDGGMFKCTYAY 126

Query: 85   RPYFYAATKEKMEMDVEAYLRRRYESQIADIEILEKEDLDLKNHLSGLHKSYLKISFDTV 144
             PYFY A K  +E  +E +L ++YE  +  +    KEDL + NHL    + +L++ F  V
Sbjct: 127  DPYFYIACKVGLENTIEEWLTKKYEGLLLKVVRERKEDLKMPNHLLAHPRLFLQLVFRNV 186

Query: 145  QQLMDVKKDLLHVVERNQAKFDAAEAY------------------------------ESI 174
              L+ V++DL+ +   N AK +A +AY                              +S 
Sbjct: 187  TDLLAVRRDLMPLALANSAKMNAIDAYAEVVNAEAAASARIAVDGDDVNTTAWSMDVDSG 246

Query: 175  LTGKREQRPQDFLDCIVDLREYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLLEKRVDLL 234
             + K+    +D  + I+D+RE+DVPY++R AIDND+R G WY V++ S  P L + VD +
Sbjct: 247  QSTKKGSGDRDPREGIIDIREFDVPYYLRVAIDNDIRVGLWYSVAMESGQPTLTRLVDRV 306

Query: 235  QRAEVHVCAFDIETTKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTP 294
            +RAE  V A+DIETTK PLKFPD   D +MMISYM+D QGYLI+NR+ V EDIED EYTP
Sbjct: 307  KRAEPVVMAYDIETTKAPLKFPDQAVDQVMMISYMIDAQGYLIVNRDIVSEDIEDFEYTP 366

Query: 295  KPEFEGYFKVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMS 354
            K  +EG F   N  +E   +R +F H+Q  KP +  T+NGD FD+PFL  RA  HG  M 
Sbjct: 367  KDGYEGPFTTFNEPDEEATIRRFFEHIQSAKPTVMATFNGDSFDFPFLAARARVHGIDMY 426

Query: 355  EELGFQCDKNQGECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPED 414
             E GF  D ++ E +++   H+DCF WVKRDSYLPQGSQGLKAVTKAKLGY+P+E++PE 
Sbjct: 427  LETGFAKD-SEDEFKSRQCIHMDCFRWVKRDSYLPQGSQGLKAVTKAKLGYNPVELDPEL 485

Query: 415  MVRFAKEKPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEM 474
            M  +A E PQ +A YSVSDAVATYYLYM YVHPFIFSL  IIP++PDEVLRKGSGTLCE 
Sbjct: 486  MTPYALEHPQELAQYSVSDAVATYYLYMKYVHPFIFSLCNIIPLNPDEVLRKGSGTLCET 545

Query: 475  LLMVQAYKANVICPNKHQSDPEKFYRNHLLESETYIGGHVECLESGVFRSDLPTSFKLDP 534
            LLMV+AYKA++I PN+H+      +  HLL SETY+GGHVE LE+GVFRSD+PT FKL P
Sbjct: 546  LLMVEAYKAHIIMPNRHEEHFGNMFEGHLLASETYVGGHVEALEAGVFRSDIPTHFKLVP 605

Query: 535  SAYEQLLNNLDRDLQYAIKVEGKMDLESVSNYDEVKNAIMEKLLRLQEEPIREECPLIYH 594
            +  ++L+++LD  L++ I+ E  ++L+ VSN++E+K  I   L  +++ P R + PLIYH
Sbjct: 606  ATVQKLIDDLDHALKFCIQTESGLELDQVSNFEEIKGKIQSILEEMRDNPNRTDKPLIYH 665

Query: 595  LDVAAMYPNIILTNRLQPPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYY 654
            LDVAAMYPNI+L+NRLQP S++ +  C  CDFN   K C RKLEW WRGE F  +R +  
Sbjct: 666  LDVAAMYPNIMLSNRLQPDSMIDESACAVCDFNHEDKQCARKLEWAWRGEFFPAQRDELN 725

Query: 655  HLKKQIESEFVDGT-NGHLSKSFLDLPKMEQQSRLKDRLKKYCQKAYKRVLDKPVTELRE 713
             +K  +  E   G   G   + F DL   EQ + +  RL  Y ++ YK+V D  +   RE
Sbjct: 726  MIKHALYQETFPGKFKGGPPRKFSDLSSTEQTALIHKRLGDYSRRVYKKVKDTRIIT-RE 784

Query: 714  AGICMRENSFYVDTVRSFRDRRYEYKGLNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDS 773
            + +C REN FY+DTVRSFRDRRYEYKGL+K+WK  L +A   G   +I+EA+ M+VLYDS
Sbjct: 785  SIVCQRENPFYIDTVRSFRDRRYEYKGLHKMWKKNLDKALGGGELAEIEEAKKMIVLYDS 844

Query: 774  LQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDG 833
            LQLAHKCILNSFYGYVMRKGARW+SMEMAG+   TGAKIIQ AR L++ IG+PLELDTDG
Sbjct: 845  LQLAHKCILNSFYGYVMRKGARWHSMEMAGITCLTGAKIIQMARKLVDDIGRPLELDTDG 904

Query: 834  IWCVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETH 893
            IWC+LPG FPENF+FK  +  K L  SYPC MLN  V    TN QY TLV+     YE  
Sbjct: 905  IWCMLPGIFPENFSFKLVN-GKSLGFSYPCTMLNHLVHAGFTNHQYHTLVN---GKYEVK 960

Query: 894  SECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKV 953
            SE SI FE+DGPYKAMILP+SKEE  L+KKRYAVFNDDG+LAELKGFE+KRRGEL+LIK+
Sbjct: 961  SENSIFFELDGPYKAMILPSSKEEDKLLKKRYAVFNDDGSLAELKGFEVKRRGELQLIKI 1020

Query: 954  FQAELFDKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLA 1013
            FQ+++F+KFL G+T EECY+AVA VA++WLD+L ++   + D EL++ I+E+ +MSK+L 
Sbjct: 1021 FQSQIFEKFLLGTTTEECYAAVAKVADQWLDVLFSKAVALDDEELVELIAENRSMSKTLQ 1080

Query: 1014 DYGEQKSCAVTTARRLSDFLGDTMVKDKGLRCQYIVACEPQGTPVSERAVPVAIFETDAE 1073
            +YG QKS +++TA+RL++FLGD MVKDKGL C++I++ +P G PV+ERAVPVAIF     
Sbjct: 1081 EYGAQKSTSISTAKRLAEFLGDQMVKDKGLACKFIISAKPFGAPVTERAVPVAIFSAAES 1140

Query: 1074 IMKFYLRKWCKTSSDVG--IRSIVDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHP 1131
            I + YLRKW K +S V   +R+I+DW YY +RL S IQK+ITIPAAMQ VSNPVPR+ HP
Sbjct: 1141 IKRLYLRKWLKDNSLVNFDLRNILDWDYYIERLGSVIQKLITIPAAMQGVSNPVPRIRHP 1200

Query: 1132 DWLYKKVREKEDKFRQRKLVDIFSSLKKDDFLNKTCNAETNLMDENVE------DLEDFP 1185
            DWL ++V   +D+F+Q KL + F S        K  + E+   DEN +      D+ED  
Sbjct: 1201 DWLSRRVATAQDRFQQHKLTNFFKSGPARIKQPKNRDMESG-NDENSDEGDGSMDIEDIS 1259

Query: 1186 KKRRNSVNGPRPIVRCFEVNNEQKTVKTTDQVDSLRQQLEPSEVSDQQPSSQNAIDTENI 1245
            +  +     P+P V    VN +    KTT +         P       P+          
Sbjct: 1260 QPSK----APKPKVAV--VNRKVAGDKTTTK---------PVPKPLPNPT---------- 1294

Query: 1246 DRIVDYKGWLELKKRKWKDNLDRRKKQKLGSLRASHQANGVSESLGDMINHKEAQRRTGV 1305
               V+Y  WL+  +  WK+    R            QA GVS                 +
Sbjct: 1295 ---VNYSAWLKAIRPVWKEARTSRL-----------QAAGVSN----------------L 1324

Query: 1306 GSYFRRQETAMTR-CHWQIIQLVPSSQSGVFLAWVVVEGIMVRIPITVPRLFYLNSKDPI 1364
             S F+     + R   W +IQ+ P+ + G F+ W+  E  +V++ + + R FY+N K P 
Sbjct: 1325 PSIFKGAHQPIVRSAAWDVIQIRPTRRQGRFMMWLGTETDVVQVALRIKRQFYINLKSPP 1384

Query: 1365 VEKFP---------GRRVNKTLPHGRRSFNLIEVMIDEDQFRKESKKLAALLADPEVE 1413
            V   P           RVNK LP    S +L ++ + ED ++      A L+ +P+ +
Sbjct: 1385 VTTGPHATFSPDYDTERVNKILPRNHPSQHLYQISVTEDVYKSNVGHFAHLMHNPQTD 1442



 Score =  276 bits (705), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 175/569 (30%), Positives = 289/569 (50%), Gaps = 41/569 (7%)

Query: 1448 ILWISDDGVPDLGGTSEEDEC--FADEVHQPVLTYPGAYRKVSVELKIHHLSVNALLKSN 1505
            +LW S    PDLGG   +      +++V  P  + PG Y  V + +++ +L+V+A+L+S+
Sbjct: 1704 VLWWSPGMKPDLGGRETDGSAGGLSEDVTSPETSRPGCYTNVCLLIEMRNLAVDAVLQSS 1763

Query: 1506 QVNEMEG-GGLFGFD------QDMNSG-PYNNELCGFDETTSSAPAFRVVKQLIQRCLTD 1557
             VNE+EG GG   F+      +D  +G P+++   G  ++  S   F ++K L++  + D
Sbjct: 1764 LVNELEGSGGTTSFEAITHTLEDYANGEPHSSVTLG--DSVLSPQVFFILKNLVKGWMLD 1821

Query: 1558 AVTSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEFRKLGATIIF 1617
               S    A+  +   +RW+ SP S ++D  +HR +H +M K F  L AEF++LG+T+I+
Sbjct: 1822 KAGSAESPAEIAVAFFWRWISSPSSHMYDLGIHRFIHGLMTKTFFQLQAEFKRLGSTVIY 1881

Query: 1618 ANFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLFMDQYNYGGI 1677
            A+F ++++ T K     A AY   +  A+ + ELF+ + L    ++  LL++D  N GGI
Sbjct: 1882 ADFGQILLLTSK-PPGNATAYATYITTAVLSNELFKHLYLHTDRYYDFLLYLDSANQGGI 1940

Query: 1678 PARADESLDDDSQVDIVSSWNIAEYLPKEIQDHFVLVVSEFMYIPWKHAQKLAASRASLQ 1737
                  + +      + ++WNI  +LP  IQ  F   +S F+   ++   K  A+  +  
Sbjct: 1941 VCVDPRAKEPSPTPCMSNTWNIQAFLPPAIQSTFHQEISRFILDYYRIRTKHTAAGKTPM 2000

Query: 1738 EGSSCTPSITVAAAENFESHIVQYVKGEISSYFTGKLLSIVRDAIH-HMKKMNNDQHNS- 1795
               +   +  V   E F     + +K  IS   T +LL++V   +  H   M  ++ +  
Sbjct: 2001 RVLNPNYTTGVQPDERFVQEQDE-IKSYISRKLTRRLLAVVHKIVQQHRSAMMGEEPDLD 2059

Query: 1796 ------PGVMQTAANIHKVDAPLEFIKHVCAAFALDQNVQHDVLVMRKNLLKYVRVREFA 1849
                  PG   T  N       LEF+K +C  F L +    ++ +MR++LL  V VREFA
Sbjct: 2060 YDFPVLPGSYLTFTN-----PALEFVKSLCEVFGLAKEYSIEIGLMRRSLLDIVGVREFA 2114

Query: 1850 PEAEFRDPCPSFILPNVICSYCNDCRDLDLCRDMALLAQD------------WHCAMPQC 1897
             EA +R PC SF L  VIC YCN  RD D CRD+ LL Q             W CA   C
Sbjct: 2115 EEATWRQPCQSFKLSMVICHYCNQMRDFDFCRDVDLLPQPGKDGGVAKVSHRWACA--SC 2172

Query: 1898 GQPYDREVMENALLQIVRQRERLYHLQDLVCIRCNQVKAAHLAEQCACAGSFRCKEDASD 1957
               YDR  +E +++ +VR+ E  + +QDL C +C ++K  +L   C C+G+       ++
Sbjct: 2173 DTEYDRRAIERSMIDVVRRMELSFQVQDLKCTKCKRIKVDNLNLHCQCSGNVHWTVGKAE 2232

Query: 1958 FRSKMQIFLNIANRQGFQLLQECTSWILE 1986
             R K++  +N+A      +L+  TS +LE
Sbjct: 2233 ARRKLRTIVNVAVVHNLAMLKAYTSQVLE 2261


>gi|58260822|ref|XP_567821.1| DNA polymerase epsilon, catalytic subunit a [Cryptococcus neoformans
            var. neoformans JEC21]
 gi|134117225|ref|XP_772839.1| hypothetical protein CNBK2100 [Cryptococcus neoformans var.
            neoformans B-3501A]
 gi|338818011|sp|P0CN27.1|DPOE_CRYNB RecName: Full=DNA polymerase epsilon catalytic subunit A; AltName:
            Full=DNA polymerase II subunit A
 gi|338818012|sp|P0CN26.1|DPOE_CRYNJ RecName: Full=DNA polymerase epsilon catalytic subunit A; AltName:
            Full=DNA polymerase II subunit A
 gi|50255457|gb|EAL18192.1| hypothetical protein CNBK2100 [Cryptococcus neoformans var.
            neoformans B-3501A]
 gi|57229902|gb|AAW46304.1| DNA polymerase epsilon, catalytic subunit a, putative [Cryptococcus
            neoformans var. neoformans JEC21]
          Length = 2250

 Score = 1315 bits (3403), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 682/1441 (47%), Positives = 929/1441 (64%), Gaps = 108/1441 (7%)

Query: 7    DRQDGRRTKKQKLIRSAEEELEAKLGYDLF----SEGDKRLGWLLTFASSSLEDEDTRKV 62
            +R+DG    ++       +E++ K+G+  F    +EG++++GWL+    + +  +     
Sbjct: 56   NREDGTAATEKFEEVKVYDEIDEKIGFWRFESVRAEGEEKVGWLVNMHQTLVPSDVHPGG 115

Query: 63   YSCIDLYFVSQDGSTFKSKYKFRPYFYAATKEKMEMDVEAYLRRRYESQIADIEILEKED 122
             + +D YF+  DG +FK    + PYFY   +   E  VE +L +RYE  I  IE  +K D
Sbjct: 116  LAAVDYYFIQDDGGSFKVSIPYEPYFYLTCRGGTESIVEEWLLKRYEGIIIRIEREKKWD 175

Query: 123  LDLKNHLSGLHKSYLKISFDTVQQLMDVKKDLLHVVERNQAKFDAAEAYESILT------ 176
            L L NHL      +LK+ F     L  +++DLL +   N  KF A +AY  +++      
Sbjct: 176  LSLPNHLLSAPPVFLKLFFHNTADLQTIRRDLLPLARSNSEKFTAVDAYADVVSAEAAAN 235

Query: 177  --GKREQRP------------QDFLDCIVDLREYDVPYHIRFAIDNDVRCGQWYDVSISS 222
              G  E R             ++  +CI+++RE+D+ YH+R AID ++R G WY V+  +
Sbjct: 236  GHGDDENRAWGAEDDTKKKKDKEPSECIIEVREHDLAYHLRVAIDLNIRVGLWYTVTSRT 295

Query: 223  TGPLLEKRVDLLQRAEVHVCAFDIETTKLPLKFPDADYDIIMMISYMLDGQGYLIINREC 282
                LE+  D ++RA+  V A+DIETTK PLKFPD   D IMMISYM+DG GYLI NRE 
Sbjct: 296  GVITLERIPDRVKRADPVVMAYDIETTKQPLKFPDQQTDQIMMISYMIDGMGYLITNREI 355

Query: 283  VGEDIEDLEYTPKPEFEGYFKVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFL 342
            VGEDI+D EYTPK E+ G F V N  +E  ++R WF H+++ KP +  TYNGD FD+PF+
Sbjct: 356  VGEDIDDFEYTPKDEYPGEFTVFNEPDEPAVIRRWFEHIRDSKPTVIATYNGDSFDFPFV 415

Query: 343  ETRAAHHGFKMSEELGFQCDKNQGECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAK 402
            + RA  HG  M EE+GF+ D  + E +++   H+DCF WVKRDSYLPQGSQGLKAVT AK
Sbjct: 416  DARAKIHGISMYEEIGFKPDIEE-EYKSRSTMHMDCFRWVKRDSYLPQGSQGLKAVTTAK 474

Query: 403  LGYDPLEVNPEDMVRFAKEKPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDE 462
            LGY+P+E++PE M  +A E+PQ++A YSVSDAVATYYLYM YVHPFIFSL  IIP+SPDE
Sbjct: 475  LGYNPIELDPELMTPYAIEQPQILAQYSVSDAVATYYLYMKYVHPFIFSLCNIIPLSPDE 534

Query: 463  VLRKGSGTLCEMLLMVQAYKANVICPNKHQSDPEKFYRNHLLESETYIGGHVECLESGVF 522
            VLRKG+GTLCE LLMV+AY A++I PN+H+      Y  HLL SETY+GGHVE LE+GVF
Sbjct: 535  VLRKGTGTLCETLLMVEAYDAHIIMPNRHEDPHGVTYEGHLLASETYVGGHVEALEAGVF 594

Query: 523  RSDLPTSFKLDPSAYEQLLNNLDRDLQYAIKVEGKMDLESVSNYDEVKNAIMEKLLRLQE 582
            RSD+PT FK+ PSA ++L+++LD  L++++  EG++ LE V NYDEVK  I   L  +++
Sbjct: 595  RSDIPTHFKIVPSAIQELIDDLDAALRFSLIEEGQVKLEDVENYDEVKQQIQTALETMRD 654

Query: 583  EPIREECPLIYHLDVAAMYPNIILTNRLQPPSIVTDEVCTACDFNRPGKTCLRKLEWVWR 642
            EP R + PLIYHLDVAAMYPNI+L+NRLQP S+  +  C  CD+NRP K C R++EW WR
Sbjct: 655  EPNRFDNPLIYHLDVAAMYPNIMLSNRLQPDSVKEEADCAVCDYNRPDKKCDRRMEWAWR 714

Query: 643  GEIFMGKRSDYYHLKKQIESE-FVDGTNGHLSKSFLDLPKMEQQSRLKDRLKKYCQKAYK 701
            GE F  KR +   ++  +E E F         + F+DL   EQ + L  RL  Y +K YK
Sbjct: 715  GEYFPAKRDEVNMVRYALEQETFPPKRPYDPKRRFVDLTPTEQSALLHKRLGDYSRKVYK 774

Query: 702  RVLDKPVTELREAGICMRENSFYVDTVRSFRDRRYEYKGLNKVWKGKLSEAKASGNSI-K 760
            +  D  +   +   IC RENSFY+DTVR+FRDRRYEYKGL+K WK  L +A   G ++  
Sbjct: 775  KTHDTKIVT-KTTIICQRENSFYIDTVRAFRDRRYEYKGLHKTWKKNLDKAFEEGGAVAT 833

Query: 761  IQEAQDMVVLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLI 820
            + EA+ M+VLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAG+   TGA IIQ AR L+
Sbjct: 834  VDEAKKMIVLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGITCLTGATIIQMARQLV 893

Query: 821  EKIGKPLELDTDGIWCVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQ 880
            E+IG+PLELDTDGIWC+LPG FPE+F FK K+  KK  ISYPC MLN  V    TNDQY 
Sbjct: 894  EQIGRPLELDTDGIWCMLPGVFPEDFNFKLKN-GKKFGISYPCTMLNHLVHAQFTNDQYH 952

Query: 881  TLVDPVSKTYETHSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGF 940
             LV+  S TY    E SI FE+DGPYKAMILP+SKEE  L+KKRYAVFN DG+LAELKGF
Sbjct: 953  ELVNNDSGTYNVKKENSIFFELDGPYKAMILPSSKEEDKLLKKRYAVFNPDGSLAELKGF 1012

Query: 941  EIKRRGELKLIKVFQAELFDKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELID 1000
            E+KRRGEL++IK+FQ+++FDKFL G T EECY+AVA VA++WLD+L ++   + D EL+D
Sbjct: 1013 EVKRRGELQMIKIFQSQIFDKFLLGKTTEECYAAVATVADQWLDILQSKASSLHDDELVD 1072

Query: 1001 YISESSTMSKSLADYGEQKSCAVTTARRLSDFLGDTMVKDKGLRCQYIVACEPQGTPVSE 1060
             I+E+ +MSK+LA+Y  QKS +++TARRL++FLG+ MVKDKGL C++I++ +P G PV+E
Sbjct: 1073 LIAENRSMSKTLAEYAGQKSTSISTARRLAEFLGEQMVKDKGLSCRFIISAKPNGAPVTE 1132

Query: 1061 RAVPVAIFETDAEIMKFYLRKWCKTSS--DVGIRSIVDWSYYKQRLSSAIQKIITIPAAM 1118
            RAVPVAIF  +  + + YLRKW K +S  D  +R+I+DW YY +RL S IQK+ITIPAA+
Sbjct: 1133 RAVPVAIFTAEEPVKRHYLRKWLKDNSLTDFDLRTILDWDYYTERLGSVIQKLITIPAAL 1192

Query: 1119 QKVSNPVPRVVHPDWLYKKVREKEDKFRQRKLVDIFSSLKKDDFLNKTCNAETNLMDENV 1178
            QKV NPVPR+ HPDWLYK++  KEDKF+Q K+ D+F+ LK                  ++
Sbjct: 1193 QKVPNPVPRIRHPDWLYKRIATKEDKFQQHKITDMFTKLK------------------DM 1234

Query: 1179 EDLEDFPKKRRNSVNGPRPIVRCFEVNNEQKTVKTTDQVDSLRQQLEPSEVSDQQPSSQN 1238
            EDL D  KK      GP+  V                 V    ++ +  E   ++   + 
Sbjct: 1235 EDLGDGQKKV-----GPKLAV-----------------VRRRNRKEQEKESEVEEVPPEP 1272

Query: 1239 AIDTENIDRIVDYKGWLELKKRKWKDNLDRRKKQKLGSLRASHQANGVSESLGDMINHKE 1298
              D     RI+         K+KW+    +++++K  + ++  + +G   S+        
Sbjct: 1273 EYDYAGYIRIM---------KKKWR----KQRQEKARARKSGLRQDGTISSM-------- 1311

Query: 1299 AQRRTGVGSYFRRQETAMTRCHWQIIQLVPSSQSGVFLAWVVVEGIMVRIPITVPRLFYL 1358
                       R Q ++M    W +IQ+  +++ G F  W+ ++G    + + VPR FYL
Sbjct: 1312 ----------LRTQTSSMNSKQWDVIQIASTNRPGEFKLWLAIDGTFQSVRLKVPREFYL 1361

Query: 1359 NSK-DP-----IVEKFPGRRVNKTLPHGRRSFNLIEVMIDEDQFRKESKKLAALLADPEV 1412
            N K DP       +++    V +TLP G+ + +L ++ +DE  F +     + L+ +P V
Sbjct: 1362 NFKEDPEPQMLATDRYEAVEVVRTLPRGQPARHLYKLSVDEVLFMEGESHFSTLINNPNV 1421

Query: 1413 E 1413
            +
Sbjct: 1422 D 1422



 Score =  260 bits (664), Expect = 7e-66,   Method: Compositional matrix adjust.
 Identities = 165/569 (28%), Positives = 281/569 (49%), Gaps = 59/569 (10%)

Query: 1448 ILWISDDGVPDLGGTSEEDECFADEVHQPVLTYPGAYRKVSVELKIHHLSVNALLKSNQV 1507
            ++W S    PDLGG SEED   ++++  P ++  G Y    +E+++  L++NA+L+S  V
Sbjct: 1677 LIWWSSTPRPDLGG-SEEDANSSEDLVSPHISNRGCYSSTVLEMEVSDLAINAVLQSALV 1735

Query: 1508 NEMEGGGL--FGFDQ------DMNSGPYNNELCGFDETTSSAPAFRVVKQLIQRCLTD-- 1557
            NEMEG G     FD       +   G  N  +   D   S+   F V+K +++    D  
Sbjct: 1736 NEMEGSGTGSLAFDSASHNLDEYAKGAVNTSVMLGDAVLSTQ-TFGVLKSMLRAWYADKA 1794

Query: 1558 -AVTSGNVF--ADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEFRKLGAT 1614
             A   G+    A+ ++   +RW+ S  S + +P LHR LH +M+K F  LLAEF++LG  
Sbjct: 1795 RAHVKGDSLSPAEIVVDQFWRWISSSTSSMFEPALHRFLHGLMRKTFLQLLAEFKRLGTQ 1854

Query: 1615 IIFANFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLFMDQYNY 1674
            +++A+F +V + T K D  +A A+   L+ A  ++ELF  + ++   FW+ L +MD  N+
Sbjct: 1855 VVYADFGRVFLLTSKPDAGSAFAFAKYLVAAANSQELFRHLIIDVAQFWNYLAWMDVANF 1914

Query: 1675 GGI---PARADESLDDDSQVDIVSSWNIAEYLPKEIQDHFVLVVSEFMYIPWKHAQKLAA 1731
            GG+   P  A        + +I   WNI  +LP  +Q  F   V+ F++  +   +  + 
Sbjct: 1915 GGVKVSPETAASREPPAKRFEISMDWNIQSFLPGTLQPVFERNVASFIFSLYSAKRSSSD 1974

Query: 1732 SRASL---------QEGSSCTPSITVAAAENFESHIVQYVKGEISSYFTGKLLSIVRDAI 1782
             R  L         Q G+  T ++     +  ++         IS   T +LLS     I
Sbjct: 1975 GREPLRVIHSLNIDQPGTEATSTMNPTKEKEKKAASKS-----ISQTLTRRLLS----DI 2025

Query: 1783 HHMKKMNNDQHNSPGVMQT-------AANIHKVDAPLEFIKHVCAAFALDQNVQHDVLVM 1835
              +K+     H  P    T        A   +++  LE IK +   ++L      +V ++
Sbjct: 2026 AAVKRQQAAVHLEPEEAYTLAFPDLPGARSKRINPTLELIKAITEVYSLASEHSIEVQIL 2085

Query: 1836 RKNLLKYVRVREFAPEAEFRDPCPSFILPNVICSYCNDCRDLDLCRDMALLA-------- 1887
            ++NLL  + V+EF+ +A F  PC S  +P VIC  CN  RD+DLCRD   L         
Sbjct: 2086 KRNLLDLIGVKEFSSDAAFNPPCESIEVPMVICKKCNAIRDVDLCRDPDRLPSVNPDSGE 2145

Query: 1888 ------QDWHCAMPQCGQPYDREVMENALLQIVRQRERLYHLQDLVCIRCNQVKAAHLAE 1941
                  ++W C   +C   YDR  +E  L+++V +    Y +QD++C++C+Q K+ +LA 
Sbjct: 2146 MLEPARKNWVCH--KCDSEYDRFQIEQPLIEMVTKTITNYQIQDVICLKCSQTKSDNLAA 2203

Query: 1942 QCACAGSFRCKEDASDFRSKMQIFLNIAN 1970
             C C G FR   + ++ ++K+++  ++ +
Sbjct: 2204 TCKCGGGFRTTSNRNELKTKLKMIKSVCD 2232


>gi|365988288|ref|XP_003670975.1| hypothetical protein NDAI_0F04140 [Naumovozyma dairenensis CBS 421]
 gi|343769746|emb|CCD25732.1| hypothetical protein NDAI_0F04140 [Naumovozyma dairenensis CBS 421]
          Length = 2256

 Score = 1315 bits (3403), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 679/1372 (49%), Positives = 907/1372 (66%), Gaps = 82/1372 (5%)

Query: 66   IDLYFVSQDGSTFKSKYKFRPYFYAA-TKEKMEMDVEAYLRRRYESQIADIEILEKEDLD 124
            +D YF+ ++G +FK+   + PYF+ + T + M  DVE +L++  ES +  I IL+K+DL 
Sbjct: 140  VDYYFLDEEGGSFKTSINYDPYFFVSCTDDSMVNDVEEFLKKYLESCLKGIHILQKDDLA 199

Query: 125  LKNHLSGLHKSYLKISFDTVQQLMDVKKDLLHVVERNQAKFDAAEAYESILTGKREQRPQ 184
            + NHL  L K+ +K+ F    QL + +K L  ++  N+        Y +           
Sbjct: 200  MDNHLIWLKKTLIKLEFVNSNQLFEARKLLRPILADNKKNKLQRNIYNNNNAVSSNNNNN 259

Query: 185  DFL----DCIVDLREYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLLEKRVDLLQRAEVH 240
            D +      I D+REYDVPYH+R +ID D+R G+WY V+    G  +E   + +  A+  
Sbjct: 260  DTIVDAKQFIEDIREYDVPYHVRVSIDKDIRIGKWYKVT---AGGFIE-NTEKVAFADPV 315

Query: 241  VCAFDIETTKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEG 300
            V AFDIETTK PLKFPD+  D +MMISYM+DG+G+LI NRE + EDIED EYTP+PE+EG
Sbjct: 316  VLAFDIETTKAPLKFPDSAVDQVMMISYMIDGEGFLITNREIISEDIEDFEYTPRPEYEG 375

Query: 301  YFKVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQ 360
             F + N ++E  LL  +F H++EV+P +  T+NGD+FDWPF+ETRA  HG  M +E+GF 
Sbjct: 376  QFTIFNEDDEKALLERFFEHIREVRPTVISTFNGDFFDWPFVETRAKIHGLDMFDEIGFA 435

Query: 361  CDKNQGECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAK 420
             D ++GE ++ +  H+DCF WVKRDSYLPQGSQGLKAVT+AKLGY+P+E++PE M  +A 
Sbjct: 436  PD-SEGEYKSSYCSHMDCFRWVKRDSYLPQGSQGLKAVTQAKLGYNPIELDPELMTPYAY 494

Query: 421  EKPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQA 480
            EKPQ ++ YSVSDAV+TYYLYM YVHPFIFSL TI+P++PDEVLRKG+GTLCEMLLMVQA
Sbjct: 495  EKPQHLSEYSVSDAVSTYYLYMKYVHPFIFSLCTILPLNPDEVLRKGTGTLCEMLLMVQA 554

Query: 481  YKANVICPNKHQSDPEKFYRNHLLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQL 540
            YK  ++ PNKH    E+FY  HLLESETY+GGHVE LE+GVFRSDL   FK+DP+A ++L
Sbjct: 555  YKGGILLPNKHTDPIERFYDGHLLESETYVGGHVESLEAGVFRSDLKNEFKIDPTAIDEL 614

Query: 541  LNNLDRDLQYAIKVEGKMDLESVSNYDEVKNAIMEKLLRLQEEPIREECPLIYHLDVAAM 600
            + +L   L++AI+ E K D+  V+N+DE+K  I EKLL L+E   R E PLIYH+DVA+M
Sbjct: 615  IEDLPHALKFAIETENKADMNEVTNFDEIKTKITEKLLDLKENTKRNELPLIYHVDVASM 674

Query: 601  YPNIILTNRLQPPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYYHLKKQI 660
            YPNI+ TNRLQP SI T+  C +CDFNRPGKTC RKL+W WRGE F  K  +Y  +K+ +
Sbjct: 675  YPNIMTTNRLQPDSIKTERDCASCDFNRPGKTCARKLKWAWRGEFFPAKMDEYNMIKRAL 734

Query: 661  ESEFVDGTNGHLSKSFL---DLPKMEQQSRLKDRLKKYCQKAYKRVLDKPVTELREAGIC 717
            ++E     N +  K +L   +L   +Q + +K RL +Y +K Y R     + E REA +C
Sbjct: 735  QNETFPNKNKYSKKPYLTFDELSYSDQVAHIKKRLTEYSKKNYHRTKVSEIVE-REAIVC 793

Query: 718  MRENSFYVDTVRSFRDRRYEYKGLNKVWKGKLSEAKASGNSIK----IQEAQDMVVLYDS 773
             REN FYVDTVR FRDRRYE+KGL+K       E + S  SI     ++  Q M+VLYDS
Sbjct: 794  QRENPFYVDTVRGFRDRRYEFKGLSKKM-----ERENSLKSIHLINMVKMKQKMIVLYDS 848

Query: 774  LQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDG 833
            LQLAHK ILNSFYGYVMRKG+RWYSMEMAG+   TGA IIQ AR L+E++G+PLELDTDG
Sbjct: 849  LQLAHKVILNSFYGYVMRKGSRWYSMEMAGITCLTGATIIQMARSLVERVGRPLELDTDG 908

Query: 834  IWCVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETH 893
            IWC+LP SFPEN+ F  ++  KKL +SYPC MLN  V +  TN QYQTLVDPV   YETH
Sbjct: 909  IWCILPSSFPENYFFTLQN-GKKLFMSYPCSMLNYRVHQQFTNHQYQTLVDPVKHRYETH 967

Query: 894  SECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKV 953
            SE SI FEVDGPYKAMILP SKEEG  IKKRYAVFN+DGTLAELKGFE+KRRGEL+LIK 
Sbjct: 968  SENSIFFEVDGPYKAMILPTSKEEGKGIKKRYAVFNEDGTLAELKGFELKRRGELQLIKN 1027

Query: 954  FQAELFDKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLA 1013
            FQ+++F  FL G+++E CY+AVA+VANRWLD+LD +G  + D +LI  I E+ +MSKSL 
Sbjct: 1028 FQSDIFKVFLDGNSLESCYAAVASVANRWLDVLDTKGAMVEDEDLIALICENKSMSKSLK 1087

Query: 1014 DYGEQKSCAVTTARRLSDFLGDTMVKDKGLRCQYIVACEPQGTPVSERAVPVAIFETDAE 1073
            +Y  QKS ++TTA+RL +FLG+ MVKDKGL+C+YI++ +P   PV+ERA+PVAIF TD  
Sbjct: 1088 EYEGQKSTSITTAKRLGEFLGEDMVKDKGLQCKYIISTKPFNAPVTERAIPVAIFSTDIN 1147

Query: 1074 IMKFYLRKWC--KTSSDVGIRSIVDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHP 1131
            I + +LR+W   +   D  IR+I+DW YY++RL+S IQKIITIPAA+Q VSNPVPRV HP
Sbjct: 1148 IKRSFLRRWTMDRALDDFDIRTIIDWDYYRERLASTIQKIITIPAALQSVSNPVPRVEHP 1207

Query: 1132 DWLYKKVREKEDKFRQRKLVDIFSSLKKDDFLNKTCNAETNLMDENVEDLEDFPKKRRNS 1191
            DWL KK+  KEDKF+Q  L           FL+KT +       +++EDL  F      +
Sbjct: 1208 DWLKKKIAIKEDKFKQTSL---------SRFLSKTTDTPKAGKIKDIEDL--FKNSDDEN 1256

Query: 1192 VNGPRPIVRCFEVNNEQKTVKTTDQVDSLRQQLEPSEVSDQQPSSQNAIDTENIDRIVDY 1251
              G   I R    +   K  +  DQ ++  + L         PS + +ID       VDY
Sbjct: 1257 EGGHIKIARSTSKHKNGK--RRRDQKEAAVEVL-------VLPSEKPSID-------VDY 1300

Query: 1252 KGWLELKKRKWK-DNLDRRKKQKLGSLRASHQANGVSESLGDMINHKEAQRRTGVGSYFR 1310
            + WLE +K KWK  N DR ++ +L                    N   +  R   G+  R
Sbjct: 1301 EKWLEYQKIKWKIQNRDRNRRTQLFG------------------NTNSSSERGAFGNIIR 1342

Query: 1311 RQETAMTRCHWQIIQLVPSSQSGVFLAWVVVEGIMVRIPITVPRLFYLNSKDPI-----V 1365
            +Q        W+I+Q   S++ G+   + ++ G +  I + +P+  Y+  K+ I     +
Sbjct: 1343 KQAETYANSTWEILQYNKSNEPGILDVFTLINGRIQNIKVKIPKTIYIKFKNDIIPTHKI 1402

Query: 1366 EKFPGRRVNKTLPH-----GRRSFNLIEVMIDEDQFRKESKKLAALLADPEV 1412
            + F   + N +LP+        +  L ++ + E  + +E +  +++L D  V
Sbjct: 1403 KHFSIEKSNSSLPNIPQLVQSTNGTLYKLTVPEGTYLEELEDSSSILNDENV 1454



 Score =  191 bits (486), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 148/634 (23%), Positives = 270/634 (42%), Gaps = 53/634 (8%)

Query: 1390 MIDEDQFRKESKKLAALLADPEVEVLGWQQNAAKIGMQRCAASSQWFNERISLARYAHI- 1448
            M+   QF  +   +   L +  +  L WQ    K  +    +   W +  I LA+Y++I 
Sbjct: 1631 MMKSIQFLNQVPVVKLALNELNLPQLNWQNGLIKKLVSHLLSCGSWVSHLIELAKYSNIP 1690

Query: 1449 ----------------------------LWISDDGVPDLGGTSEEDEC----FADEVHQP 1476
                                         W  +  +PD GGT +E +       ++    
Sbjct: 1691 IGNLNLDTMNFIIDVLYARKLKQEGIIMWWNENVPLPDHGGTEKEFDLNTSWLMNDSSYI 1750

Query: 1477 VLTYPGAYRKVSVELKIHHLSVNALLKSNQVNEMEGGGLFGFDQDMNSGPYNNELCGFDE 1536
             +  P  Y    +E++I +L+VN +L S  +N+ EG  L   +  ++    N     F E
Sbjct: 1751 EMNNPNVYDNAVLEIEISNLTVNTVLGSALINDAEGSDLADINV-LDGNTNNGGSSAFVE 1809

Query: 1537 TTSSAPAFRVVKQLIQRCLTDAVTSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKV 1596
             + S  A  V++ +++    D     N  AD ++     W  +P  KL D  L   +  +
Sbjct: 1810 DSFSGAALTVLRNMLKEWW-DLALQDNSVADILVNSFVGWTQNPTCKLFDGSLRYHIQNL 1868

Query: 1597 MQKVFAMLLAEFRKLGATIIFANFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIE 1656
             +K    L+ EF  LG+ ++FA+ +K++I T KF      AY   ++K+++T  +F +++
Sbjct: 1869 TKKSLLQLINEFNTLGSNVVFADRNKLLIKTTKFSPENCYAYSQYMIKSIRTNPMFGYLD 1928

Query: 1657 LEPVHFWHSLLFMDQYNYGGIPARADESLDDDSQVDIVSSWNIAEYLPKEIQDHF----V 1712
            L+   +W  LL+M+QYN+ GI     E   +       S W I  +LP   Q  F    +
Sbjct: 1929 LKITRYWDILLWMNQYNFSGIACSEIEE-KEKQDFSAYSHWQIRNFLPSIFQSEFDDWMM 1987

Query: 1713 LVVSEFMYIPWKHAQKLAASRASLQEGSSCTPSITVAAAENFESHIVQYVKGEISSYFTG 1772
            +++   +     + +K A +    Q  +   P        N  S     +  + +  F G
Sbjct: 1988 IILDSMVKTKEAYLEKFAGNT---QRFTQIIPMKARNGNANDSSEETCSI-SQFTELFRG 2043

Query: 1773 KLLSIVRDAIHHMKKMNND-QHNSPGVMQTAANIH-KVDAP-LEFIKHVCAAFALDQNVQ 1829
             L+  +     + ++   D Q+ S          H  +  P LE +K +     L +   
Sbjct: 2044 PLIKRITKLFKNQQEFILDTQYASDYAFPVLPGSHLNLKNPLLELVKSLSHVMLLSKKTT 2103

Query: 1830 HDVLVMRKNLLKYVRVREFAPEAEFRDPCPSFILPNVICSYCNDCRDLDLCR-DMALLAQ 1888
             +V  +RK +LK   +REFA  +EF+DP  S ++   +C YC+   DLD C+ D   L  
Sbjct: 2104 LEVRELRKEVLKIFDIREFAKISEFKDPSTSLVIDGFLCEYCSYISDLDFCKADSETL-- 2161

Query: 1889 DWHCAMPQCGQPYDREVMENALLQIVRQRERLYHLQDLVCIRCNQVKAAHLAEQCACAGS 1948
             ++C    C + +++ +++  L++        Y  QDL C RC+++K  +++  C C+GS
Sbjct: 2162 -FNCK--NCHREFNKLLLQEHLIEKFYSTIETYVTQDLSCSRCHKIKQDYMSMHCDCSGS 2218

Query: 1949 FRCKEDASDFRSKMQIFLNIANRQGFQLLQECTS 1982
            +           ++QIF  +A    F ++    S
Sbjct: 2219 WEGVISPEKVTKEVQIFKQVAEYFEFDMVMNALS 2252


>gi|348683141|gb|EGZ22956.1| hypothetical protein PHYSODRAFT_310598 [Phytophthora sojae]
          Length = 2413

 Score = 1315 bits (3402), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 698/1450 (48%), Positives = 942/1450 (64%), Gaps = 103/1450 (7%)

Query: 38   EGDKRLGWLLTFASSSLED-EDTRKVYSCIDLYFVSQDGSTFKSKYKFRPYFYAATKEKM 96
            E   +LGWLL   + +L D  + +   S ++LYF+ QDG  FK++  ++PY Y   +   
Sbjct: 92   EDRAKLGWLLNLRACTLPDPAEGKHEVSGLELYFLEQDGKAFKTRVIYQPYLYVRPEPNR 151

Query: 97   EMDVEAYLRRRYESQIADIEILEKEDLDLKNHLSGLHKSYLKISFDTVQQLMDVKKDLLH 156
              DV AY  R++E  +A  E + +EDLD+  HL+G    Y+K+SF TV  LM VKK+L  
Sbjct: 152  SQDVIAYCLRKFEGLVAKAERVFREDLDMPGHLNGKRALYVKLSFATVSDLMAVKKELAP 211

Query: 157  VVERNQAKFDAAEAYESILTGK-REQRPQDFL--------------------DCIVDLRE 195
            +V RNQ +  A +AYE  + G+ REQ  +D L                      ++ LRE
Sbjct: 212  LVARNQERLQARQAYE--MQGQAREQVTEDDLIFGGGVDADGVKGAGTDESESALLALRE 269

Query: 196  YDVPYHIRFAIDNDVRCGQWYDVSISSTGPL----LEKRVDLLQRAEVHVCAFDIETTKL 251
            YDVPY +R AID D+R G WY V    T P     + ++ D++ +AE  VCAFDIE TK 
Sbjct: 270  YDVPYPMRVAIDLDIRVGAWYHVDYDPTAPYAPSDVRRQKDMVDKAEPVVCAFDIECTKA 329

Query: 252  PLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNVNNEI 311
            PLKFPDA  D I MISYM+D QGYLI+NRE V E+I+D EYTPK ++ G F V N  NE 
Sbjct: 330  PLKFPDAQVDQIYMISYMIDRQGYLIVNREFVSEEIQDFEYTPKEDYPGPFIVFNEENEE 389

Query: 312  ELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDKNQGECRAK 371
            +LL+ +F H+ E KP I+VTYNGD+FDWPF++ RA  HG  M+ E+G   D+  GE R +
Sbjct: 390  QLLKRFFEHVIEEKPHIFVTYNGDFFDWPFIDARAQVHGINMAHEIGVSLDERSGEYRGR 449

Query: 372  FACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQMMASYSV 431
             + H+D F WVKRDSYLPQGSQGLKAVTK KLGYDP+EV+ EDMV  A+++P  MASYSV
Sbjct: 450  CSVHMDAFCWVKRDSYLPQGSQGLKAVTKYKLGYDPVEVDAEDMVALARDEPLKMASYSV 509

Query: 432  SDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVICPNKH 491
            SDAVAT+YLY  YVH F+FSL TIIP+  ++VLRKGSGTLCE LLMV+A+  N+ICPNK 
Sbjct: 510  SDAVATFYLYDKYVHLFVFSLCTIIPLGSEDVLRKGSGTLCEALLMVEAFGGNIICPNKQ 569

Query: 492  QSD-PEKFYRNHLLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQLLNNLDRDLQY 550
             S   EKFY+ HL+ESETY+GGHVECLESGVFR+D    F+L PSA++QL++N+DRDL++
Sbjct: 570  SSAREEKFYKGHLVESETYVGGHVECLESGVFRADFLYDFQLVPSAFQQLIDNVDRDLRF 629

Query: 551  AIKVEGKMDLESVSNYDEVKNAIMEKLLRLQEEPIREECPLIYHLDVAAMYPNIILTNRL 610
            +++VE  + L+ V+NYDEVK  I+++L+ L+E P R+E PLIYHLDVAAMYPNIILTNRL
Sbjct: 630  SLEVEMNVPLDRVANYDEVKKDIVDRLVGLRERPNRKEQPLIYHLDVAAMYPNIILTNRL 689

Query: 611  QPPSIVTDEVCTACDFNR---------PGKTCLRKLEWVWRGEIFMGKRSDYYHLKKQIE 661
            QP +IV +  C AC +N             +C R+++WVWRG+ +   R +YY +K QIE
Sbjct: 690  QPCAIVNEADCAACAYNTECGRAAIKDKDASCQREMDWVWRGDFYPATRPEYYSIKTQIE 749

Query: 662  SEFV--------------DGTNGHLSK-SFLDLPKMEQQSRLKDRLKKYCQKAYKRVLDK 706
             E                  TNG  S   F  LP  +Q+  LK R K YC   YK+    
Sbjct: 750  YENFPLEKKGVPANTDAGKRTNGAASTVPFAQLPTDKQELLLKQRFKSYCSSVYKKT--- 806

Query: 707  PVTE--LREAGICMRENSFYVDTVRSFRDRRYEYKGLNKVWKGKLSEAKASGNSIKIQEA 764
             VTE   R A +CMREN FYV+TVR+FRDRRY+YKGL K WK K+S+A  + + +   +A
Sbjct: 807  KVTEEQKRSATVCMRENPFYVNTVRAFRDRRYDYKGLTKAWKKKVSQAAEAKDLLAKIDA 866

Query: 765  QDMVVLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIG 824
            Q+  ++YDSLQLAHKCILNSFYGYVMRKGARW+SMEMAG+VT+TG+ II  AR L+E+IG
Sbjct: 867  QNKCLVYDSLQLAHKCILNSFYGYVMRKGARWHSMEMAGIVTHTGSNIITGARELVEQIG 926

Query: 825  KPLELDTDGIWCVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVD 884
            +PLELDTDGIW +LP SFPE F+FK KD   + +ISYPCVMLN DV    TN QY  L D
Sbjct: 927  RPLELDTDGIWAILPKSFPETFSFKLKDGGSR-SISYPCVMLNADVHAKFTNPQYHEL-D 984

Query: 885  PVSKTYETHSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKR 944
            P S  Y TH ECSI FEVDGPYKAM+LPAS EEG L+KKRYAVFN D +LAELKGFE+KR
Sbjct: 985  PESGKYNTHKECSILFEVDGPYKAMVLPASTEEGKLLKKRYAVFNFDHSLAELKGFELKR 1044

Query: 945  RGELKLIKVFQAELFDKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISE 1004
            RGEL+LIK FQ+++F+ FL G ++EECY++VA  ANRWLD++D +GK + D EL+  I+E
Sbjct: 1045 RGELQLIKAFQSQVFECFLDGDSLEECYASVAKCANRWLDVIDTRGKSMDDEELMALITE 1104

Query: 1005 SSTMSKSLADYGEQKSCAVTTARRLSDFLGDTMVKDKGLRCQYIVACEPQGTPVSERAVP 1064
            + +MS  L +Y  QKS ++TTARRL +FLG+ M+KDKGL C+ I+A  P G  V+ERA+P
Sbjct: 1105 NKSMSGKLDEYEGQKSTSITTARRLGEFLGEEMIKDKGLTCKMIIAARPYGEKVTERAIP 1164

Query: 1065 VAIFETDAEIMKFYLRKWCKTS--SDVGIRSIVDWSYYKQRLSSAIQKIITIPAAMQKVS 1122
             AIF T+  + K +L+KW K     D  IRSI+DW YY+ R +S +QKII++PAA Q V 
Sbjct: 1165 TAIFATEDAVKKHFLKKWLKDPHLQDFDIRSILDWDYYRTRFASTVQKIISLPAAFQNVR 1224

Query: 1123 NPVPRVVHPDWLYKKVREKEDKFRQRKLVDIFSSLKKDDFLNKTCNAETNLMDENVEDLE 1182
            NPVPR+  PDW+ K+VREK  K +Q  +   F +  K        +A        + D+E
Sbjct: 1225 NPVPRIELPDWMRKQVREKNAKHQQGNMKQFFKAADK--------SASNGDYVAQLIDME 1276

Query: 1183 DFPKKRRNSVNGPRPIVRCFEVNNEQKTVKTTDQVDSLRQQLEPSEVSDQQPSSQNAIDT 1242
            D  K ++ S  G +P  R       ++  K +D  D+      P E  D        +  
Sbjct: 1277 DLMKGKQPSRAG-KPQSR-------KRGNKASDDTDN----SSPIEEIDDDDVEDVPVAK 1324

Query: 1243 ENIDRIVDYKGWLELKKRKWKDNLDRRKKQKL---------GSLRASHQANGVSESLGDM 1293
              +   V +  WL+ +K+KWK  L +R++++          G    ++ A+G ++     
Sbjct: 1325 VKLGE-VPFTDWLKNRKKKWKSMLGKRRREREERMRNFSGAGGFGMANSAHGSAKRFQSG 1383

Query: 1294 INHKEAQRRTGVG--SYFRRQETAMTRCHWQIIQLVPSSQSGVFLAWVVV--EGIMVRIP 1349
                 A +  GVG  ++     +A+ R +WQI++ +   Q G+F  WV+     ++ RI 
Sbjct: 1384 ATSALAAKGNGVGMENFVFDAGSALQREYWQIVE-IQQEQGGIFTCWVLTGQSRMLQRIT 1442

Query: 1350 ITVPRLFYL----NSKDPIVEKFPG-RRVNKTLPH-GRRSFNLIEVMIDEDQFRKESKKL 1403
            + +PR+FY+      ++ ++   PG RRV++ +PH   +  +++EVM+ E Q+++  K++
Sbjct: 1443 LKMPRVFYITCDEGDQENLLSLLPGSRRVSRIVPHYSSKPQSVLEVMLSERQYQQYHKEI 1502

Query: 1404 AALLADPEVE 1413
            + +L DP V+
Sbjct: 1503 SQILGDPHVK 1512



 Score =  282 bits (721), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 193/671 (28%), Positives = 324/671 (48%), Gaps = 118/671 (17%)

Query: 1414 VLGWQQNAAKIGMQRCAASSQWFNERISLARYAHI------------------------- 1448
             L W++   +  + RC   +Q++++ +  ARYAH+                         
Sbjct: 1741 ALTWRKLMGEKMLTRCFEMTQYYSDVLDCARYAHLPVGNFTGDHSIAILDTLYSRILTKH 1800

Query: 1449 ---LWISDDGVPDLGG------------------TSEEDECFADEVHQP------VLTYP 1481
                W S   +PDLGG                    +  +   D V Q       V+   
Sbjct: 1801 KHLWWHSPTSLPDLGGKEQEQQFQQLFSQSLLGSAQQSSKKKGDAVSQHRVDTSVVVCEK 1860

Query: 1482 GAYRKVSVELKIHHLSVNALLKSNQVNEMEGGGLF--------GFDQDMNSGPYNNE--- 1530
            G++  V VEL++  L+VNA+L ++Q++ +EG G+         G  +  +S   +N    
Sbjct: 1861 GSFVDVCVELELDGLAVNAILVASQIHSIEGLGVAHQMEIDFDGNGEGESSSKGDNAAAP 1920

Query: 1531 -LCGFDETTSSAPAFRVVKQLIQRCLTDAVTSGNVFADAILQHLYRWLCSPHSKLHDPVL 1589
             +   D   S   AFR+++ ++     D + S N FAD +LQ  YRWLCSP+S   DP L
Sbjct: 1921 AVAEGDAEESCHEAFRLLRVMVTTLFKDFLASRNKFADHVLQQFYRWLCSPNSLSFDPAL 1980

Query: 1590 HRILHKVMQKVFAMLLAEFRKLGATIIFANFSKVIIDTGKFDLSAAKAYCDSLLKALQTR 1649
            H ++ ++M+K+F  LLAEFR+LG+ I++A+FSK+I+ T K  +  A+ Y + +L+ + + 
Sbjct: 1981 HAMVKRLMEKLFLQLLAEFRRLGSQIVYADFSKIIVCTKKKSVRDAQTYLNFILQTVLSN 2040

Query: 1650 ELFEWIELEPVHFWHSLLFMDQYNYGGI------PARADESLD------DDSQVDIVSSW 1697
            ELF+ +   P  ++ +L F+D  NYG I      P    E  D      D+  ++IVS W
Sbjct: 2041 ELFQVLNFTPKKYFSNLFFLDAENYGCILLKNVVPEEEQEESDPDADASDEKPLEIVSHW 2100

Query: 1698 NIAEYLPKEIQDHFVLVVSEFMYIPWKHAQKLAASRASLQEGSSCTPSITVAAAENFE-- 1755
            NIA YLP+ + ++F+++V +F+       +     R  L+ G +   ++  A  +  +  
Sbjct: 2101 NIANYLPRGVDEYFLILVGQFI-----RRRAEFQRRRLLKGGDAKVDAVEDADDQPLDED 2155

Query: 1756 ----SHIVQYVKGEISSYFTGKLLSIVRDAIHHMKKMNNDQHNSPGVMQTAANIHKVDAP 1811
                S + +Y +  +SSYF+ K+L +V + + +    N D+ + P  +   +++      
Sbjct: 2156 EKQLSPLAKYSQRLVSSYFSDKMLRLVPEILTY----NMDRDSFP--VFAGSHLAMESPA 2209

Query: 1812 LEFIKHVCAAFALDQNVQHDVLVMRKNLLKYVRVREFAPEAEFRDPCPSFILPNVICSYC 1871
            LE +K V A F L+ +V+  V  MR+ LLK +R+ EFA EA+FR+P  SF + +VIC  C
Sbjct: 2210 LELVKFVSAVFLLEPSVETQVGKMRRTLLKLLRMSEFADEAQFRNPSLSFTVQDVICLCC 2269

Query: 1872 NDCRDLDLCRDMALL----------------------AQDWHCAMPQCGQPYDREVMENA 1909
            N CR +DLCRD  L                          WHC  P+C   YD+   E  
Sbjct: 2270 NLCRSVDLCRDPQLFKGSASRSDEKDGGQETGDNAEATSAWHC--PRCFALYDKTAFEMR 2327

Query: 1910 LLQIVRQRERLYHLQDLVCIRCNQVKAAHLAEQCACAGSFRCKEDASD-FRSKMQIFLNI 1968
            L+++V+ +   Y LQDL C +C+      + E C C+G++       +     +++   I
Sbjct: 2328 LVEMVQAQSVAYQLQDLYCRKCHLPAEHKMREYCPCSGTYALMPGVRESLLETLRLLNRI 2387

Query: 1969 ANRQGFQLLQE 1979
            A +  F+ L E
Sbjct: 2388 AQQHNFEWLLE 2398


>gi|71004978|ref|XP_757155.1| hypothetical protein UM01008.1 [Ustilago maydis 521]
 gi|74704124|sp|Q4PFV5.1|DPOE_USTMA RecName: Full=DNA polymerase epsilon catalytic subunit A; AltName:
            Full=DNA polymerase II subunit A
 gi|46096785|gb|EAK82018.1| hypothetical protein UM01008.1 [Ustilago maydis 521]
          Length = 2305

 Score = 1315 bits (3402), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 636/1171 (54%), Positives = 829/1171 (70%), Gaps = 42/1171 (3%)

Query: 25   EELEAKLGYDLFSEGDKRLGWLLTFASSSLEDEDTRKVYSCIDLYFVSQDGSTFKSKYKF 84
            +E++ KLG+    +G  R  WL+    + L D D     S +D YF+  D S FK+   +
Sbjct: 68   DEIDEKLGFHRLEQGQTRQAWLVNMHPTLLRDPDHPTGKSGVDFYFIEDDASMFKATVLY 127

Query: 85   RPYFYAATKEKMEMDVEAYLRRRYESQIADIEILEKEDLDLKNHLSGLHKSYLKISFDTV 144
            +PYF    +   E  VE +LRRRYE  +  I+   KEDL L NHL G  + YL+++F  V
Sbjct: 128  QPYFLVGCRPGTESSVEEWLRRRYEGLVQSIQRDRKEDLKLPNHLLGNQRLYLRLTFLNV 187

Query: 145  QQLMDVKKDLLHVVERNQAKFDAAEAYESIL----------------------------- 175
            Q L+ V+K+LL + +  Q K  A + Y  +L                             
Sbjct: 188  QDLLSVRKELLPIAKAAQKKLSAVDTYADVLSAASAAASASLGIQLDSDGHNAALDPDDG 247

Query: 176  -TGKREQRPQDFLD---CIVDLREYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLLEKRV 231
             TG R++     LD   C+VD+REYD+PY++R AID DVR G WYDVS       L    
Sbjct: 248  WTGARKRAAASALDPAECLVDIREYDIPYYLRVAIDQDVRVGLWYDVSFEDGIVSLNMVK 307

Query: 232  DLLQRAEVHVCAFDIETTKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLE 291
            D ++RA+  V AFDIETTK PLKFPDA+ D +MMISYM+DGQG+LI NRE V EDIED E
Sbjct: 308  DRVKRADPVVMAFDIETTKQPLKFPDAETDAVMMISYMIDGQGFLITNREIVSEDIEDFE 367

Query: 292  YTPKPEFEGYFKVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGF 351
            YTP+ E+EG F + N  +E+ +L+ +F+H +E +P +  TYNGD FD+PF++ RA  HG 
Sbjct: 368  YTPRDEYEGPFIIFNEPDELGVLQRFFSHFREARPTVVATYNGDLFDFPFIDARARAHGL 427

Query: 352  KMSEELGFQCDKNQGECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVN 411
             M  E+GF  D +  E +++   HLDCF WV+RDSYLPQGSQGLKAVT AKLGYDP+E++
Sbjct: 428  NMMSEIGFAKDSDN-EYKSRATAHLDCFRWVQRDSYLPQGSQGLKAVTVAKLGYDPMELD 486

Query: 412  PEDMVRFAKEKPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTL 471
            PE M  +A E+PQ +A YSVSDAVATYYLYM YVHPFIFSL  IIP++PDEVLRKGSGTL
Sbjct: 487  PELMTPYAIEQPQTLAQYSVSDAVATYYLYMKYVHPFIFSLCNIIPLNPDEVLRKGSGTL 546

Query: 472  CEMLLMVQAYKANVICPNKHQSDPEKFYRNHLLESETYIGGHVECLESGVFRSDLPTSFK 531
            CE LLMVQA+K N+I PN+H+      Y+ HLLESETY+GGHVE LE+GVFRSD+ T F+
Sbjct: 547  CETLLMVQAFKGNIIMPNRHEDPVGNTYKGHLLESETYVGGHVEALEAGVFRSDIETDFR 606

Query: 532  LDPSAYEQLLNNLDRDLQYAIKVEGKMDLESVSNYDEVKNAIMEKLLRLQEEPIREECPL 591
            +DP+A +QL+++LD  LQ++I+ EGK+DL+ + NYDEVK  I   L  ++++P+R++CPL
Sbjct: 607  VDPAAIQQLIDDLDAALQFSIREEGKLDLDDIENYDEVKAEIRTMLEVMRDQPVRKDCPL 666

Query: 592  IYHLDVAAMYPNIILTNRLQPPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEIFMGKRS 651
            IYHLDVAAMYPNI+L+ RLQP S+V++ +C  CD+NRPG  C ++++W WRGE F  KR 
Sbjct: 667  IYHLDVAAMYPNIMLSYRLQPDSMVSEAMCATCDYNRPGMKCDKRMDWAWRGEYFPAKRD 726

Query: 652  DYYHLKKQIESEFVDGTNGHLS-KSFLDLPKMEQQSRLKDRLKKYCQKAYKRVLDKPVTE 710
            +   ++  + +E       HL+ +++ DL   E+ + L  RL  Y +K Y++  +   T 
Sbjct: 727  EVNMIRNALSNETFPPKAAHLARRTYDDLDPNERTALLHKRLGDYSRKVYRKTHESK-TV 785

Query: 711  LREAGICMRENSFYVDTVRSFRDRRYEYKGLNKVWKGKLSEAKASGNSIKIQEAQDMVVL 770
            +REA IC REN FY++TVR FRDRRYEYKGL+K WK  L +A +  ++I   EA+ M+VL
Sbjct: 786  IREAVICQRENPFYINTVRDFRDRRYEYKGLHKTWKKNLDKADSLNDTI---EAKKMIVL 842

Query: 771  YDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELD 830
            YDSLQLAHKCILNSFYGYVMRKGARWYSMEMAG+   TGA IIQ A+ L+++IG+PLELD
Sbjct: 843  YDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGITCLTGASIIQMAKELVDRIGRPLELD 902

Query: 831  TDGIWCVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTY 890
            TDGIWC+LPG FPENF FK K   KK  ISYPC MLN  V    TN QY  LVD  +  Y
Sbjct: 903  TDGIWCMLPGVFPENFNFKVKG-GKKFGISYPCTMLNHLVHEKFTNHQYHELVDKQTGKY 961

Query: 891  ETHSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKL 950
            E  SE SI FE+DGPYKAMILP+SKEE  L+KKRYAVFN DG+LAELKGFE+KRRGEL+L
Sbjct: 962  EVRSENSIFFELDGPYKAMILPSSKEEDKLLKKRYAVFNTDGSLAELKGFEVKRRGELQL 1021

Query: 951  IKVFQAELFDKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSK 1010
            IK FQ ++F+KFL G+T+ ECY+AVA VAN+WLD+L ++G  + D ELID I+E+ +MSK
Sbjct: 1022 IKDFQKQIFEKFLLGTTLNECYAAVAKVANQWLDVLYSKGSTLHDEELIDLIAENKSMSK 1081

Query: 1011 SLADYGEQKSCAVTTARRLSDFLGDTMVKDKGLRCQYIVACEPQGTPVSERAVPVAIFET 1070
            +L +YG  KS A+TTA+RL++FLG  M+KDKGL C++I++ +P G PV+ERAVPVA+F  
Sbjct: 1082 TLQEYGSLKSTAITTAKRLAEFLGAQMIKDKGLACKFIISAKPFGAPVTERAVPVALFNA 1141

Query: 1071 DAEIMKFYLRKWCKTSS--DVGIRSIVDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRV 1128
            +  +  +YL+K+ + +S  D  IR+I+DW+YY +R    IQK+ITIPAAMQKVSNPVPRV
Sbjct: 1142 EPSVKHYYLKKFLRDNSITDFDIRNILDWNYYIERFGGVIQKLITIPAAMQKVSNPVPRV 1201

Query: 1129 VHPDWLYKKVREKEDKFRQRKLVDIFSSLKK 1159
             HPDWL+K+V  +EDKF+QRKL D+F    K
Sbjct: 1202 RHPDWLHKRVAAREDKFKQRKLTDVFRPAAK 1232



 Score =  272 bits (695), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 193/678 (28%), Positives = 313/678 (46%), Gaps = 112/678 (16%)

Query: 1402 KLAALLADPEVEVLGWQQNAAKIGMQRCAASSQWFNERISLARYAH-------------- 1447
            K+AA   + E+  LGWQ  +A+  +Q    +S W    I LA +                
Sbjct: 1623 KIAAAALEDELPALGWQLYSARRMLQCYLRASNWIRGWIDLASHFDLPLCNMEKDFTIFG 1682

Query: 1448 --------------ILWISDDGVPDLGGTSEEDECFA--DEVHQPVLTYPGAYRKVSVEL 1491
                          +LW S    PDLGG  ++    +  DE     +++ GAY  V +E+
Sbjct: 1683 ADIDFARRLVKQDMVLWWSPHPRPDLGGREQDIHAQSRWDEQESLEISHAGAYSTVCLEV 1742

Query: 1492 KIHHLSVNALLKSNQVNEMEGG-GLFGFD------QDMNSGPYNNELCGFDETTSSAPAF 1544
             +  L+V+++L+S  VNEMEG    F F+       + + G         D   +SA  F
Sbjct: 1743 GLVDLAVDSVLQSGSVNEMEGSTSGFAFEGASHNLDEYSRGTVETATILGDSVLTSA-VF 1801

Query: 1545 RVVKQLIQRCLTDAVTSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAML 1604
              VK +++   T    + + +A  +  + +RW  S  S L +P L R L  +M+K    L
Sbjct: 1802 AAVKGMVKAWYTTKRRNRSPYAALLSDNFWRWASSDGSALFEPALQRFLFGLMKKTLLQL 1861

Query: 1605 LAEFRKLGATIIFANFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWH 1664
            LAEF++LGA+I++A+F+++ + T K   + A AY   LL A+ +RELF+ ++L+ +H+W 
Sbjct: 1862 LAEFKRLGASIVYASFNRLFLLTSKPTAANAMAYSRYLLTAVTSRELFKHVQLDIIHYWE 1921

Query: 1665 SLLFMDQYNYGGIPARADESL---DDDSQ----------VDIVSSWNIAEYLPKEIQDHF 1711
             LL+MD  N+GG+ A  D  +   D+ +Q           ++  +WNI  +LP  +Q+ F
Sbjct: 1922 YLLWMDTANFGGVIADTDSLVAPTDEQAQEASAANQVATFNVEMNWNIQTFLPLAVQEKF 1981

Query: 1712 VLVVSEFMYIPWKHAQKLAAS--------RASLQEGSSCTP------------------S 1745
             + V  F+Y  +++ ++ A +        RA ++  +   P                   
Sbjct: 1982 SVAVGSFIYSLYEYKRRAALAGEHERTPLRAVVEPNTPADPVTLHGDGGQVNGDGGKDDR 2041

Query: 1746 ITVAAAENFESHIVQY------------VKGEISSYFTGKLLSIVRDAIHHMKKMNNDQH 1793
              +A A  F S ++ +            +K  + +       +I RD       M   +H
Sbjct: 2042 TALAPAAKFTSDLINHTMTRKLLKHLSELKSSMQTSSDEINAAIARDEDEEYIDMLTTEH 2101

Query: 1794 NS-------PGVMQTAANIHKVDAPLEFIKHVCAAFALDQNVQHDVLVMRKNLLKYVRVR 1846
                     PG   T +N       LEFIK   A  +L ++   +V ++++NLL  ++VR
Sbjct: 2102 RRMWSFPVLPGSWLTPSN-----PLLEFIKTTNAVLSLAKDHAIEVSILKRNLLDMIKVR 2156

Query: 1847 EFAPEAEFRDPCPSFILPNVICSYCNDCRDLDLCRDMALL---------AQDWHCAMPQC 1897
            EF+PEAEFR+PC  F LP VIC++CND R LDLCRD  L+         A  W CA  +C
Sbjct: 2157 EFSPEAEFRNPCEPFKLPLVICTFCNDDRTLDLCRDADLMPSAASNGGGAPKWKCA--KC 2214

Query: 1898 GQPYDREVMENALLQIVRQRERLYHLQDLVCIRCNQVKAAHLAEQCACAGSFRCKEDASD 1957
              PY+   +E  L+         +HLQDL C +C  +K  +L   C C+GSF       +
Sbjct: 2215 QFPYNIAALEMRLVNTANAYLESFHLQDLRCNKCGALKQTNLQPHCECSGSFGLMVTRKE 2274

Query: 1958 FRSKMQIFLNIANRQGFQ 1975
               +++    IA   G +
Sbjct: 2275 TLKRLKSLKTIAEFHGLE 2292


>gi|342876383|gb|EGU78005.1| hypothetical protein FOXB_11482 [Fusarium oxysporum Fo5176]
          Length = 2212

 Score = 1314 bits (3401), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 680/1419 (47%), Positives = 934/1419 (65%), Gaps = 83/1419 (5%)

Query: 27   LEAKLGYDLFSEGDKRLGWLLTFASSSLEDEDTRKVYSCIDLYFVSQDGSTFKSKYKFRP 86
            ++  +G+  +  G KR GWL+    +S+EDE      + +D YF+ +DGSTFK+  +F P
Sbjct: 53   IDENMGFARYESGKKREGWLVNIQPTSIEDERIPGGRAAVDCYFIEEDGSTFKATVEFDP 112

Query: 87   YFYAATKEKMEMDVEAYLRRRYESQIA-DIEILEKEDLDLKNHLSGLHKSYLKISFDTVQ 145
            YF  A K+  E +VE +++R     +   I  +EK+DL++ NHL G  +++L++ F  V 
Sbjct: 113  YFLIAVKKGRESEVEEWVKRVAGGGVVKSIRRVEKDDLNMPNHLLGYRRTFLELRFANVN 172

Query: 146  QLMDVKKDLLHVVERNQAKFDAAEAYESILTGKREQRP-----------------QDFLD 188
             LM  +KD++ + E+N+   +A +AY  +                           D  D
Sbjct: 173  DLMAARKDIMPIAEKNKKNMNAMDAYAELTRNSSNGDFDLFDDSRDDDRNMNTALSDASD 232

Query: 189  CIVDLREYDVPYHIRFAIDNDVRCGQWYDV----SISSTGPLLEKRVDLLQRAEVHVCAF 244
             IVD+REYDVPYH+R  ID D+R G+WY V     ++   P  E+ +     AE  V A+
Sbjct: 233  FIVDIREYDVPYHVRVMIDLDIRAGKWYFVEAKHGVTKIYPNEERSLP----AEPVVMAY 288

Query: 245  DIETTKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKV 304
            DIET+KLPLKFPDA  D I+MISYM+DGQG+LI NR+ + EDI D +YTPKPE+ G F +
Sbjct: 289  DIETSKLPLKFPDAATDQIIMISYMIDGQGFLITNRQILSEDIGDFDYTPKPEYPGPFMI 348

Query: 305  TNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDKN 364
             N  +E  ++  +F H++E +P +  TYNGD+FDWPF+E RA+ +G  M +E+G++ D N
Sbjct: 349  FNEPDEKAVIERFFLHIKEARPTVIATYNGDFFDWPFVEARASINGIDMYQEIGWKKD-N 407

Query: 365  QGECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQ 424
            + + +  ++ H+DCF WV RDSYLPQGS+GLKAVT AKLGYDP E++PE M  +A E+PQ
Sbjct: 408  EDQYKCNYSVHMDCFHWVNRDSYLPQGSRGLKAVTVAKLGYDPDELDPELMTPYATERPQ 467

Query: 425  MMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKAN 484
             +A YSVSDAVATYYLYM YVHPFIFSL TI+P+S DEVLRKG+GTLCEMLLMVQAY+  
Sbjct: 468  TLAEYSVSDAVATYYLYMKYVHPFIFSLCTILPLSGDEVLRKGTGTLCEMLLMVQAYQRE 527

Query: 485  VICPNKHQSDPEKFYRNHLLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQLLNNL 544
            ++ PNK+ +  E F+  HLL+SETY+GGHVE +E+GVFR+D+P  F +DP A ++LL +L
Sbjct: 528  IVLPNKYITPKEAFWDGHLLDSETYVGGHVESIEAGVFRADIPVDFAVDPGAIDELLGDL 587

Query: 545  DRDLQYAIKVEGKMDLESVSNYDEVKNAIMEKLLRLQEEPIREECPLIYHLDVAAMYPNI 604
            D  L++ I VE K + + V NY+EVK  I+E+L +L+E P R E PLIYHLDVA+MYPNI
Sbjct: 588  DAALKFVITVEEKKNFDDVENYEEVKAQIVERLNKLKETPNRNEKPLIYHLDVASMYPNI 647

Query: 605  ILTNRLQPPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYYHLKKQIESEF 664
            + TNRLQP S++ +  C ACDFNRPGKTC R+L W WRGE    KR +Y  +K  +++E 
Sbjct: 648  MTTNRLQPDSMIQESDCAACDFNRPGKTCDRRLPWAWRGEYLPPKRDEYNMIKNALQNEK 707

Query: 665  VDGT-NGHLSKSFLDLPKMEQQSRLKDRLKKYCQKAYKRVLDKPVTELREAGICMRENSF 723
              G       ++F +L   EQ + ++ RL+ Y QK Y ++ D   T +REA IC REN F
Sbjct: 708  FPGKYPSSPMRTFQELSADEQANLVRKRLQLYSQKVYHKIHDS-TTIVREAIICQRENPF 766

Query: 724  YVDTVRSFRDRRYEYKGLNKVWKGKLSEAKASGNS-IKIQEAQDMVVLYDSLQLAHKCIL 782
            Y++TVR FRDRRY+YKG  KVWKGK S  +++G +  ++  A+ M++LYDSLQLAHK IL
Sbjct: 767  YINTVRDFRDRRYDYKGKAKVWKGKTSSLQSAGAAQSEVDAAKKMIILYDSLQLAHKVIL 826

Query: 783  NSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLPGSF 842
            NSFYGYVMRKG+RWYS+EMAGV   TGA IIQ AR L+E++G+PLELDTDGIWC+LP +F
Sbjct: 827  NSFYGYVMRKGSRWYSLEMAGVTCLTGAHIIQMARQLVERLGRPLELDTDGIWCMLPATF 886

Query: 843  PENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEFEV 902
            PENF+FK K   KKL ISYPCVMLN  V    TN QYQTLVD  +  YETHS+ SI FEV
Sbjct: 887  PENFSFKLKG-GKKLNISYPCVMLNHHVHAKFTNHQYQTLVDKKTLKYETHSDNSIFFEV 945

Query: 903  DGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKF 962
            DGPYKAM+LP SKEE   +KKRYAVFNDDG+LAELKGFE+KRRGELKLIK+FQ ++F  F
Sbjct: 946  DGPYKAMVLPTSKEEDKNLKKRYAVFNDDGSLAELKGFEVKRRGELKLIKIFQQQIFKFF 1005

Query: 963  LHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLADYGEQKSCA 1022
            L G T+ ECY AVA VANRWLD+L ++G  +AD EL++ ISE+ +MSK+L +YG QKS +
Sbjct: 1006 LEGETLAECYGAVAKVANRWLDVLHSKGTTLADEELMELISENRSMSKTLEEYGNQKSTS 1065

Query: 1023 VTTARRLSDFLGDTMVKDKGLRCQYIVACEPQGTPVSERAVPVAIFETDAEIMKFYLRKW 1082
            +TTA+RL+DFLG+ MVKDKGL C++I+   P+  PV+ERAVPVAIF  +  + + YLRKW
Sbjct: 1066 ITTAKRLADFLGEQMVKDKGLNCKFIICARPKNAPVTERAVPVAIFSAEESVKRTYLRKW 1125

Query: 1083 CKTS-SDVGIRSIVDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLYKKVREK 1141
             K   +D   R+++DW YY +RL S IQK+ITIPAA+QKV NPVPRV HPDWL +++  K
Sbjct: 1126 LKEEPTDTDPRALLDWDYYLERLGSVIQKLITIPAALQKVRNPVPRVPHPDWLQRRINIK 1185

Query: 1142 EDKFRQRKLVDIFSSLKKDDFLNKTCNAETNLMDENVEDLEDFPKKRRNSVNGPRPIVRC 1201
            +DK +Q+KL D+F     +D  N         ++  ++D+EDF  K          +++ 
Sbjct: 1186 DDKLKQKKLTDLFKKSPLEDITN---------INGRLDDVEDFGSK----------LLKP 1226

Query: 1202 FEVNNEQKTVKTTDQVDSLRQQLEPSEVSDQQPSSQNAID--TENIDRIVDYKGWLELKK 1259
             +VN    + + T  V   R+  EP+E  D   +    +   +EN +  + Y+      +
Sbjct: 1227 KQVNAVIASSQATTTVQK-RKSPEPAENPDPMSALPEVMPSASENYEAFLMYQKKKWKLQ 1285

Query: 1260 RKWKDNLDRRKKQKLGSLRASHQANGVSESLGDMINHKEAQRRTGVGSYFRRQETAMTRC 1319
            ++ +     R++Q  G  R            G  +N+        +   F +Q       
Sbjct: 1286 KQAR----IRRRQLFGDRR------------GGAVNN--------LQQTFMKQAHTTYMS 1321

Query: 1320 HWQIIQLVPSSQSGVFLAWVVVEGIMVRIPITVPRLFYLNSK-----DPIVEKFPGRRVN 1374
            +WQ++ L  +   G+ +A+V+++  +  + + VPR  +LN K     D  VE     +VN
Sbjct: 1322 NWQVLHLKATETPGIVMAYVLIDAKIHTLKVNVPRQVFLNLKSKDLPDVEVEGCEVEQVN 1381

Query: 1375 KTLPHGRRSFNLIEVMIDEDQFRKESKKLAALLADPEVE 1413
             TLP+G  S +L ++ + ED +  ES+K + L   P VE
Sbjct: 1382 YTLPNGHPSSHLFKLTVSEDVYFNESEKFSLLFNHPSVE 1420



 Score =  259 bits (661), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 170/617 (27%), Positives = 288/617 (46%), Gaps = 69/617 (11%)

Query: 1407 LADPEVEVLGWQQNAAKIGMQRCAASSQWFNERISLARYAHI------------------ 1448
            +AD  +  LGWQ   AK  +        W     +LARY  +                  
Sbjct: 1616 VADSSLPPLGWQSVIAKRLVGHYLGLGSWILHLTALARYGDVPLCNLERDDPRFLIDVAY 1675

Query: 1449 ----------LWISDDGVPDLGGTSEEDECFA-DEVHQPVLTYPGAYRKVSVELKIHHLS 1497
                      LW S D  PD  G  ++D     D V  P +  PG +  V +++ + +L+
Sbjct: 1676 ARRLQANGVVLWWSPDARPDHAGYEKDDLLGPLDTVKMPNVNNPGTFSSVCIDIDVRNLA 1735

Query: 1498 VNALLKSNQVNEMEGGGLFGFDQDMNSGPYNNELCGFDETTSSAPAF-----RVVKQLIQ 1552
            +N +L S+ +NE+EG     F          N      ET +S  AF     +V++++++
Sbjct: 1736 INTILTSSLINELEGADSVSF----------NPAADDSETLASENAFANAGVQVLREMVK 1785

Query: 1553 RCLTDAVTSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEFRKLG 1612
               T+A   G+  AD ++QHL RW+ +P S ++D  LH  +  + +K F  L+A+FR++G
Sbjct: 1786 AWWTEAC-RGSTMADVLVQHLVRWVENPDSFMYDRALHYYVQMMSRKAFQQLMADFRRVG 1844

Query: 1613 ATIIFANFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLFMDQY 1672
            + +IFAN +++I+ T K ++  A AY + ++K+++++ LF +I+LE   +W  L++ D++
Sbjct: 1845 SQVIFANANRLILQTTKAEVGNAYAYSEYIIKSIKSKPLFHFIDLEIKEYWDYLVWYDEF 1904

Query: 1673 NYGGIPARADESLDDDSQ-VDIVSSWNIAEYLPKEIQDHFVLVVSEFMYIPWKHAQKLAA 1731
            NYGG      E ++ + Q ++ V  W +A +LP  +Q  F   V EF+       Q +  
Sbjct: 1905 NYGG--KACQEVIEAEEQNLETVMHWQMATFLPVRLQSTFQDWVIEFI-------QLMHQ 1955

Query: 1732 SRASLQEGSSCTPSITVAAAENFESHIVQYVKGE-----ISSYFTGKLLSIVRDAIHHMK 1786
             +         TP +T   ++  E H  Q + G+     +     G L    R+ +H   
Sbjct: 1956 LKRPHNGDPDATPRLTQLPSKGLEDHEGQILLGKAFEKPLKKDIIGLLNKQKRELLHPEL 2015

Query: 1787 KMNNDQHNSPGVMQTAANIHKVDAPLEFIKHVCAAFALDQNVQHDVLVMRKNLLKYVRVR 1846
              +      PG     ++++  +  LE +K +    +LD+N+  +  ++RK LL    VR
Sbjct: 2016 AQDYTFPVLPG-----SHLNPRNPILELVKSLMQVLSLDKNITLEARLLRKELLALFEVR 2070

Query: 1847 EFAPEAEFRDPCPSFILPNVICSYCNDCRDLDLCRDMALLAQD--WHCAMPQCGQPYDRE 1904
            EF+ +  F +P  S  LP + C  C   RDLDLCRD  L  +   W C    CG  +DR 
Sbjct: 2071 EFSKDGTFTNPSESLRLPQISCDSCTMMRDLDLCRDEDLFGEGAAWRCGF--CGTEFDRV 2128

Query: 1905 VMENALLQIVRQRERLYHLQDLVCIRCNQVKAAHLAEQCACAGSFRCKEDASDFRSKMQI 1964
             +E  LL IV      +  QDL C RC  ++     E C C+G ++      D   K+ +
Sbjct: 2129 AIEERLLGIVESWIVEWTTQDLKCARCGALRLNDFMEHCTCSGEWKEIVSRQDVSKKLGV 2188

Query: 1965 FLNIANRQGFQLLQECT 1981
               +A   G ++L +  
Sbjct: 2189 MKRVAKFYGLRMLSDVV 2205


>gi|66811008|ref|XP_639211.1| hypothetical protein DDB_G0283189 [Dictyostelium discoideum AX4]
 gi|74854710|sp|Q54RD4.1|DPOE1_DICDI RecName: Full=DNA polymerase epsilon catalytic subunit A; AltName:
            Full=DNA polymerase II subunit A
 gi|60467818|gb|EAL65833.1| hypothetical protein DDB_G0283189 [Dictyostelium discoideum AX4]
          Length = 2380

 Score = 1313 bits (3399), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 680/1427 (47%), Positives = 943/1427 (66%), Gaps = 79/1427 (5%)

Query: 44   GWLLTFASSSLEDE-DTRKVYSCIDLYFVSQDGSTFKSKYKFRPYFYAATKEKMEMDVEA 102
            GWLL     S +D  D  K  + ++L+F+  D ++F+    + PYFY   KE  + +VE+
Sbjct: 31   GWLLNMQPGSSKDGLDIEK--ASLELFFIQDDATSFRVWIPYNPYFYIYVKEGHQSEVES 88

Query: 103  YLRRRYESQIADIEILEKEDLDLKNHLSGLHKSYLKISFDTVQQLMDVKKDLLHVVERNQ 162
            YL+  YE  IA I+I++KEDLDL+NHLSGL + YLKI F  V  L+ V+ DL  +++RN+
Sbjct: 89   YLKSTYEKDIAGIDIMDKEDLDLENHLSGLKRKYLKIRFHNVSTLLSVRNDLFPIIKRNK 148

Query: 163  AKFDAA-----EAYESILTGKREQRPQDF------------------------------- 186
             K + +     E+   IL     +   +                                
Sbjct: 149  QKSNTSEAYEDESLNKILNSYYNKGNNNNNNHQNYNNNNNQNNNNFNKELNKDDNNNNNS 208

Query: 187  ------LDCIVDLREYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLLEKRVDLLQRAEVH 240
                   + I+D+REYDVPY++R AID ++R G WY V  +     + +    + R +  
Sbjct: 209  KLNKQATEYILDIREYDVPYYVRAAIDLNIRVGLWYTVIKNGRLTTVNELTTRVDRPDPK 268

Query: 241  VCAFDIETTKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEG 300
            V A+DIETTKLPLKFPD+  D IMMISYMLD QGYLI+NRE V EDI+D EYTPKPE+ G
Sbjct: 269  VLAYDIETTKLPLKFPDSSIDSIMMISYMLDKQGYLIVNREIVSEDIKDFEYTPKPEYYG 328

Query: 301  YFKVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQ 360
             F V N  +E  +L  +F+ ++  KP I+V+YNGD FDWPF+E+RA +HG  M  ++GF+
Sbjct: 329  PFTVFNEPDEKSVLERFFSEIKREKPHIFVSYNGDMFDWPFVESRAEYHGLSMFHQIGFR 388

Query: 361  CDKNQGECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAK 420
             D   GE R+K   H+D F WVKRDSYLP GS GLKAVT+ KL YDPLE++PE M++ A+
Sbjct: 389  ND--NGEYRSKINPHMDAFCWVKRDSYLPHGSHGLKAVTREKLRYDPLELDPELMLKSAQ 446

Query: 421  EKPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQA 480
            E P+ +A+YSVSDAVATYYLYM YVHPFIFSL TIIPM+PD+VLRKGSGTLCE LLM QA
Sbjct: 447  EDPETLANYSVSDAVATYYLYMNYVHPFIFSLCTIIPMNPDDVLRKGSGTLCEALLMTQA 506

Query: 481  YKANVICPNKHQSDPEKFYRNHLLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQL 540
            +KA+VI PNKH+ D    Y+ HLLESETY+GGHVECLESGVFRSD+PT+F LDP++ E+ 
Sbjct: 507  FKADVIFPNKHKDDINSMYKGHLLESETYVGGHVECLESGVFRSDIPTNFSLDPASIEKH 566

Query: 541  LNNLDRDLQYAIKVEGKMDLESVSNYDEVKNAIMEKLLRLQEEPIREECPLIYHLDVAAM 600
            + N+D+ L++A+K EG + L++VSNY EVK  +++K   L+E P ++  PLIYHLDV+AM
Sbjct: 567  MGNIDQVLKFALK-EGGIPLDTVSNYQEVKEDVLKKFTLLKENPKQQSHPLIYHLDVSAM 625

Query: 601  YPNIILTNRLQPPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYYHLKKQI 660
            YPNIILTN+LQP ++V DEVC  C +N+P   C R L+W WRG+     +S+Y  + +Q+
Sbjct: 626  YPNIILTNKLQPTAVVNDEVCATCVYNKPESQCQRTLDWQWRGDYSPSNQSEYRLILQQL 685

Query: 661  ESE-FVDGTNGHLSKSFLDLPKMEQQSRLKDRLKKYCQKAYKRVLDKPVTELREAGICMR 719
            ESE F DG      KSFL L + ++   L+ RLK+Y +K Y++   +   E+R   ICMR
Sbjct: 686  ESEKFGDGDE---RKSFLSLSEEKRNELLRKRLKEYSRKVYRKT-HQITQEIRSDTICMR 741

Query: 720  ENSFYVDTVRSFRDRRYEYKGLNKVWKGKLSEA-KASG--NSIKIQEAQDMVVLYDSLQL 776
            ENSFYVDTVR FRDRRY +K  ++ WK K  +A + SG  NS+ +  AQ MVVLY+SLQL
Sbjct: 742  ENSFYVDTVRLFRDRRYVFKNHHRDWKIKYDQAMQESGGTNSVAVVAAQGMVVLYESLQL 801

Query: 777  AHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWC 836
            AHKCILNSFYGYVMRKGARWYSM+MAG+VT+TG+ II+ AR ++E++G+PLE+DTDGIWC
Sbjct: 802  AHKCILNSFYGYVMRKGARWYSMQMAGIVTHTGSNIIKEAREVVEQMGRPLEIDTDGIWC 861

Query: 837  VLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSEC 896
            +LP  FPEN+T K+    KK+T SY C MLN  VA++ TN QYQ   +  + TY    EC
Sbjct: 862  ILPSHFPENYTLKSASTGKKVTFSYICEMLNEKVAKSFTNHQYQDY-NAETNTYTIRDEC 920

Query: 897  SIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQA 956
            SI FE DGPY+ M++P SKE+ + +KKRYAVFN +G + ELKGFEIKRRGELKLIK+FQ+
Sbjct: 921  SILFECDGPYRCMLIPTSKEKDVKLKKRYAVFNREGRICELKGFEIKRRGELKLIKLFQS 980

Query: 957  ELFDKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLADYG 1016
            E+F +FL G ++E CY +V AVANRWLD+LD+  ++  + +LI+ I+ESS MS+ L +YG
Sbjct: 981  EVFKEFLGGDSLEGCYQSVGAVANRWLDILDSHAENYEEKDLIELITESSNMSRKLEEYG 1040

Query: 1017 EQKSCAVTTARRLSDFLGDTMVKDKGLRCQYIVACEPQGTPVSERAVPVAIFETDAEIMK 1076
             QKS A++TA++L++FLGD M+KDKGL CQYI++ +P G+P++ERA+PVAIF+ D E   
Sbjct: 1041 TQKSSAISTAKKLAEFLGDDMIKDKGLSCQYIISNKPAGSPITERALPVAIFDADFETRC 1100

Query: 1077 FYLRKWCKT-SSDVGIRSIVDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLY 1135
             YLR+W K+ S D+ IR ++DW YY+QRLS  IQKIITIPAA+Q V+NPVPRV+HPDW+ 
Sbjct: 1101 HYLRRWTKSPSGDLDIRELIDWDYYRQRLSGVIQKIITIPAALQNVTNPVPRVIHPDWIL 1160

Query: 1136 KKVREKEDKFRQRKLVDIFSSLKKDDFLNKTCNAETNLMD------ENVEDLEDFPKKRR 1189
            K++R  ED  +Q  +   F   + +D  N   N   N  D      +  +D+E+    R 
Sbjct: 1161 KEIRRNEDGRQQTSITSFFEKTEDNDQDNDNDNDNDNDNDNDNSKPQQTDDIENMFSSRF 1220

Query: 1190 NSVNGPRPIVRCFEVNNEQKTVKTTDQVDSLRQQLEPSEVSDQQPSSQNAIDTENIDRIV 1249
              +    P V  F+ + +  +  ++  +   +  +E    +++Q        T +ID+  
Sbjct: 1221 KDLPAFNPKVTKFKRSKQSSSDVSSLLIKKSKSSIE--TFTNEQEKQIMETKTPSIDK-- 1276

Query: 1250 DYKGWLELKKRKWK-DNLDRRKKQKLGSLRASHQANGVSESLGDMINHKEAQRRTGVGSY 1308
            D++GWL + K+KWK   L ++++Q+LG          + +S    I  K   R +   S+
Sbjct: 1277 DFQGWLSISKKKWKIQRLLKKRRQRLGG--------SLFDSDSFRIGSKLTNRESSSSSF 1328

Query: 1309 FRRQETAMTRCHWQIIQLVP--SSQSGVFLAWVVVEGIMVRIPITVPRLFYLNSKDPIVE 1366
            F+ Q   + + +W II + P    + G++  W ++E  ++ I + + R+FYLNS D    
Sbjct: 1329 FKSQSDIIKKGYWNIISIEPIYGGEPGIYQMWSLIEDQLIPIKVDIGRVFYLNSIDTDPY 1388

Query: 1367 KFPGRRVNKTLPHGRRSFNLIEVMIDEDQFRKESKKLAALLADPEVE 1413
            +   +  N   P G++ FN+  V + E QF ++SK+L  L  +P +E
Sbjct: 1389 EDAQKNTNVIPPRGKQRFNVFSVTMSESQFLEQSKELNTLFTNPMIE 1435



 Score =  179 bits (453), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 102/359 (28%), Positives = 180/359 (50%), Gaps = 79/359 (22%)

Query: 1441 SLARYAHILWISDDGVPDLGGTSEEDECFADEVHQPVLTYPGAYRKVSVELKIHHLSVNA 1500
            SL    H+LW+SD   PDLGG+ E+D  F +E++   +     Y +V  EL I +L+ N 
Sbjct: 1676 SLVEQKHLLWMSDSNFPDLGGSEEDDAKFYEELNNVEINNSDCYNQVCFELDIENLATNT 1735

Query: 1501 LLKSNQVNEMEG--GGLFGFDQDM-------------------NSGPYNNELCGFD---- 1535
            +L+S  + E+EG  G   G + ++                   N    N+    FD    
Sbjct: 1736 ILESIHLAEIEGILGNELGDESNVAMFDDIKNTSNNSNTKNGANQNTTNDTTSSFDKLSI 1795

Query: 1536 ----------ETTSSAPAFRVVKQLIQRCLTDAVTSGNV--------FADAILQHLYRWL 1577
                      + +     F +++ L+ +   D V+  N         +++ +L H YRW+
Sbjct: 1796 TNKFRSAINHQISGCEKEFNILRNLVSKWKLDLVSGSNSKRNEISSRYSNYLLLHFYRWI 1855

Query: 1578 CSPHSKLHDPVLHRILHKVMQKVFAMLLAEFRKLGATIIFANFSKVIIDTGKFDLSAAKA 1637
             S +SKL+DP+L+R LH++M+KVF  L+ EF+KLG+ I++ANF+K+II + K  +  A++
Sbjct: 1856 SSTNSKLYDPILYRTLHQLMKKVFIQLIFEFKKLGSKIVYANFNKIIICSQKDSIEDARS 1915

Query: 1638 YCDSLLKALQTRELFEWIELEPVHFWHSLLFMDQYNYGGI-------------------- 1677
            YC+ +L  ++ +ELF WI  +  +++H+LL+++  NY GI                    
Sbjct: 1916 YCNYILAVIKKKELFSWINFKQTNYYHNLLWLNNSNYSGILYFNPLINKNQQQQQQQQDN 1975

Query: 1678 -----PARADESLDD-----------DSQVDIVSSWNIAEYLPKEIQDHFVLVVSEFMY 1720
                      E+ ++                I+++WNIAE+LP +IQ  F++++S+++Y
Sbjct: 1976 ADDDDDDDVSENEEEQQQNKNKKLKKIKNGKIITNWNIAEFLPPQIQTSFIIIISDYIY 2034



 Score =  127 bits (319), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 69/206 (33%), Positives = 107/206 (51%), Gaps = 35/206 (16%)

Query: 1809 DAPLEFIKHVCAAFALDQNVQHDVLVMRKNLLKYVRVREFAPEAEFRDPCPSFILPNVIC 1868
            + PLEFIK VC   ++D+++   V  +R  L+  ++VREF+ EA+F+DPC SF LP+VIC
Sbjct: 2166 NPPLEFIKFVCHVLSIDKSISSRVSRLRMKLMTSMKVREFSDEAKFKDPCVSFTLPDVIC 2225

Query: 1869 SYCNDCRDLDLCRDMALLA-----------------------------QDWHCAMP---- 1895
            S C+ CRD+DL R+    +                              D    +P    
Sbjct: 2226 SSCHSCRDIDLLRNTNTTSISSRLSSQQKSNNNDSDDSDDDNEENEGDDDNIIRVPELSC 2285

Query: 1896 -QCGQPYDREVMENALLQIVRQRERLYHLQDLVCIRCNQVKAAHLAEQCA-CAGSFRCKE 1953
             QC   Y +  +E+ L++I+++R   Y LQDL C +CN VK+ +L + C  C+G + C +
Sbjct: 2286 IQCKGHYSKNTIESQLVEIIQRRSLSYQLQDLRCSKCNDVKSDNLGDICPQCSGQWECTQ 2345

Query: 1954 DASDFRSKMQIFLNIANRQGFQLLQE 1979
              + F   + IF +IA    F+ L E
Sbjct: 2346 SNNLFSKDLIIFKSIAEYHNFEWLGE 2371


>gi|430811182|emb|CCJ31357.1| unnamed protein product [Pneumocystis jirovecii]
          Length = 2147

 Score = 1313 bits (3398), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 681/1433 (47%), Positives = 920/1433 (64%), Gaps = 94/1433 (6%)

Query: 27   LEAKLGYDLFSEGDKRLGWLLTF---------------ASSSLEDEDTRKVYSCIDLYFV 71
            ++ ++G+D    G    GWL+                   +SL D D++   S +  YF+
Sbjct: 39   IDERMGFDRLETGPPLEGWLINMHEVKIINYVLCLTVDIKTSLPD-DSQGGKSAMAFYFI 97

Query: 72   SQDGSTFKSKYKFRPYFYAATKEKMEMDVEAYLRRRYESQIADIEILEKEDLDLKNHLSG 131
             +DG+TFK+   F PYF+ A K   +++VEAYLR+ +++ I  I    KEDL + NHL+G
Sbjct: 98   QEDGNTFKTVMSFEPYFFVACKTGCDVEVEAYLRKTFQT-IIRISRCVKEDLQMPNHLTG 156

Query: 132  LHKSYLKISFDTVQQLMDVKKDLLHVVERNQAKFDAAEAYESILTGKRE--------QRP 183
              + +L++ F     L+ V+K L+ + E N+ K DA +    ++T   +        Q  
Sbjct: 157  YRRLFLQLFFKNTSDLLSVQKVLVPMAEANKRKMDALDVLNEVVTATSDVILHQETSQSS 216

Query: 184  QDFL--DCIVDLREYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLLEKRVDLLQRAEVHV 241
            +  L  D I+D REYDVPY +R A+DND+R G+WY V + +    +    D + RAE  V
Sbjct: 217  RLILSEDYIIDAREYDVPYSVRVAMDNDIRVGKWYHVKVQAGVVNMNTIEDRITRAEPVV 276

Query: 242  CAFDIETTKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGY 301
              FDIETTKLPLKFPD+  D I+MISYM+DGQG+LI NR+ V  DI++ EYTPKPE+EG 
Sbjct: 277  LVFDIETTKLPLKFPDSTIDQIIMISYMIDGQGFLITNRDVVSSDIDNFEYTPKPEYEGS 336

Query: 302  FKVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQC 361
            F + N ++E  L++ +F H+++VKP I  TYNGD FDWPF++ RA+ +   M EE+GF  
Sbjct: 337  FWIFNESDEKSLIQRFFNHIKDVKPTIIATYNGDVFDWPFIDARASMYSLNMYEEIGFMK 396

Query: 362  DKNQGECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKE 421
            +K+  E ++ +  H+DC+ WVKRDSYLPQGSQGLKAVTKAKLGY+P+E++PE M R+A E
Sbjct: 397  NKSD-EYQSSYCVHMDCYRWVKRDSYLPQGSQGLKAVTKAKLGYNPIELDPELMTRYASE 455

Query: 422  KPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAY 481
            KPQ++A YSVSDAV+TYYLYM YVHPFIFSL  IIP++P +VL KG+GTLCEMLLMVQA+
Sbjct: 456  KPQVLAQYSVSDAVSTYYLYMKYVHPFIFSLCNIIPLNPGDVLSKGTGTLCEMLLMVQAF 515

Query: 482  KANVICPNKHQSDPEKFYRNHLLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQLL 541
            K  +I PNKH    +K Y  HLLESETY+GGHVE LE+GVFRSD+   F +DP+  E+L+
Sbjct: 516  KKGIILPNKHIDRYDKHYEGHLLESETYVGGHVESLEAGVFRSDILEKFSIDPNIVEKLI 575

Query: 542  NNLDRDLQYAIKVEGKMDLESVSNYDEVKNAIMEKLLRLQEEPIREECPLIYHLDVAAMY 601
            + LD  L+++I+VE K  +  + NYDE+K  I+ +L   ++ PIR E P IYHLDVA+MY
Sbjct: 576  SELDPALKFSIEVEAKKKVSDIINYDEIKQQIILQLEEFKKNPIRTEYPKIYHLDVASMY 635

Query: 602  PNIILTNRLQPPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYYHLKKQIE 661
            PNI++TNRLQP S++ +  C +CDFN+PGK C +K+ W W G+ F  KR +Y  +K  + 
Sbjct: 636  PNIMITNRLQPDSMIDEFRCASCDFNKPGKLCDKKMTWSWHGDFFPAKRDEYNMIKHALR 695

Query: 662  SEFVDGTNGHLSKSFLDLPKMEQQSRLKDRLKKYCQKAYKRVLDKPVTELREAGICMREN 721
            +E   G     SKSF +LP +EQ S ++ RL +YC+K Y R+ D  V E RE  +C REN
Sbjct: 696  NESFPGKVSGTSKSFDELPVLEQSSIIQKRLTEYCKKIYGRIRDSSVVE-RETIVCQREN 754

Query: 722  SFYVDTVRSFRDRRYEYKGLNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHKCI 781
             FYVDTV+SFRDRRYE K L K WK KL  A  S  S +I EA+ M+VLYDSLQLAHK I
Sbjct: 755  PFYVDTVKSFRDRRYELKDLLKQWKQKLDSASPSDLS-QIDEARKMIVLYDSLQLAHKVI 813

Query: 782  LNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLPGS 841
            LNSFYGYVMRKG+RWYSMEMAGV   TGA+IIQ AR LIEK+G+PLELDTDGIWC+LP +
Sbjct: 814  LNSFYGYVMRKGSRWYSMEMAGVTCLTGARIIQTARQLIEKVGRPLELDTDGIWCILPST 873

Query: 842  FPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEFE 901
            FP+N+ F   +  K   ISYPCVMLN  +    TN QY  LVD V   YE  SE SI FE
Sbjct: 874  FPQNYLFNFSN-GKTFFISYPCVMLNYLIHSQFTNHQYHDLVDHVRYKYEVRSENSIFFE 932

Query: 902  VDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDK 961
            +DGPYKAMILP S EE   IKK+YAVFNDD T AELKGFE+KRRGELKLIK+FQ++ F  
Sbjct: 933  IDGPYKAMILPTSVEEDKTIKKKYAVFNDDNTFAELKGFEVKRRGELKLIKIFQSQTFKL 992

Query: 962  FLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLADYGEQKSC 1021
            FL G+T+EECY AVA VAN+WLD+L ++G  +AD ELID ISE+ +MSK+L +YG QKS 
Sbjct: 993  FLEGTTLEECYGAVATVANKWLDILYSKGSTLADEELIDLISENRSMSKTLEEYGVQKST 1052

Query: 1022 AVTTARRLSDFLGDTMVKDKGLRCQYIVACEPQGTPVSERAVPVAIFETDAEIMKFYLRK 1081
            +++TARRL++FLGD + KD+GL C++I++ +P+   + ERA+PVAIF  D  I K +LRK
Sbjct: 1053 SISTARRLAEFLGDQVTKDRGLLCRFIISSKPKDASIVERAIPVAIFSADESIKKHFLRK 1112

Query: 1082 WC--KTSSDVGIRSIVDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLYKKVR 1139
            W    + SD  IR+I+DW YY +RLSS IQK+ITIPAAMQ VSNPVPRV  P+WL ++  
Sbjct: 1113 WLHDNSLSDYDIRTIIDWDYYVKRLSSVIQKLITIPAAMQMVSNPVPRVAQPEWLQRRHA 1172

Query: 1140 EKEDKFRQRKLVDIFSSLKKDDFLNKTCNAETNLMDENVEDLEDFPKKRRNSVNGPRPIV 1199
             K DKF+Q  ++  F  L K   +    N +      +  D+E+FP +  + ++      
Sbjct: 1173 AKLDKFKQHSIMKSFKVLPK--VMEDITNTDKK---SSFIDIEEFPFQETSQIS------ 1221

Query: 1200 RCFEVNNEQKTV-KTTDQVDSLRQQLEPSEVSDQQPSSQNAIDTENIDRIVDYKGWLELK 1258
              F+  NE K + K  D+ D                     +D    D   DYK WL+ +
Sbjct: 1222 --FKATNEPKEITKEVDKDDFFA-----------------ILDLPAADIDYDYKSWLQHQ 1262

Query: 1259 KRKW---KDNLDRRKKQKLGSLRASHQANGVSESLGDMINHKEAQRRTGVGSYFRRQETA 1315
            K KW   K N DRR+     ++ A++   G                      +FR +   
Sbjct: 1263 KYKWRIQKQNRDRRRHLFGPNIDANNNLLG----------------------FFRDKAIF 1300

Query: 1316 MTRCHWQIIQLVPSSQSGVFLAWVVVEGIMVRIPITVPRLFYLNSKDPIVEKF-----PG 1370
                 W++++   +  +G   AWV+++ ++  I + +PR+ Y+N K   V +F       
Sbjct: 1301 TYTKTWEVLEFHQTDIAGELRAWVLIDNVLHSIKLVIPRIIYINFKSSDVPEFNIEDCEI 1360

Query: 1371 RRVNKTLPHGRRSFNLIEVMIDEDQFRKESKKLAALLADPEVEVLGWQQNAAK 1423
             +V+K LP G+ S  L E+ I E  +  + K L   L  P ++ +   Q + K
Sbjct: 1361 EKVSKILPTGKYSDYLFELKIPEQVYNNKQKSLLNFLNHPSIDGIFESQISTK 1413



 Score =  189 bits (481), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 162/617 (26%), Positives = 276/617 (44%), Gaps = 116/617 (18%)

Query: 1409 DPEVEVLGWQQNAAKIGMQRCAASSQWFNERISLARYAHI-------------------- 1448
            D  +  LGWQ    K  +      S + + RI L+RY++I                    
Sbjct: 1595 DNNIPSLGWQTYVGKKAITSFLHLSAFVSYRIKLSRYSNIPFCDILEDDSKFVIDVTFAR 1654

Query: 1449 --------LWISDDGVPDLGGTSEEDECFADE-VHQPVLTYPGAYRKVSVELKIHHLSVN 1499
                    LW S   VPD GG  ++   +  E +  P++  PG+Y  V +EL +  L+V+
Sbjct: 1655 CLMEHNYLLWWSRSSVPDYGGHEKDWTLYTQEGLDIPLVNNPGSYENVCIELDVRSLAVS 1714

Query: 1500 ALLKSNQVNEMEGGG-----LFGF-DQDMNSGPYNNELCGFDETTSSAPAFRVVKQLIQR 1553
            A+L S  VN  +         F F D D+ +G  N     F +   S+    V+K L++ 
Sbjct: 1715 AILNSALVNAFDSASDQIPDEFSFLDNDIYNGSEN-----FIDVNISSSVILVLKLLLKH 1769

Query: 1554 CLTDAVTSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEFRKLGA 1613
             L +A T GN  AD ++QH  RW+                            +  ++ G+
Sbjct: 1770 WLFEAST-GNRNADLMVQHFLRWV----------------------------SNLKRSGS 1800

Query: 1614 TIIFANFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLFMDQYN 1673
             I+FAN  +V                   L   Q + LF ++++    +W  LL+MD  N
Sbjct: 1801 KIVFANTFRV-------------------LNQNQNKPLFNFLDINIKEYWDYLLWMDDVN 1841

Query: 1674 YGGIPARADESLDDDSQVDIVSSWNIAEYLPKEIQDHFVLVVSEFMYIPWKHAQKLAASR 1733
            YGG   +A   + +   +D +  W+IA +LPK +QD F   ++EF+ + +K      +  
Sbjct: 1842 YGG---KACLEVKEGQNLDTILHWHIANFLPKILQDEFKAWIAEFISLMYK------SKM 1892

Query: 1734 ASLQEGSS-CTPSITVAAAENFESHIVQYVKGEISSYFTGKLLSIVRDAIHHMK----KM 1788
            ++L E S+       V  ++ FE      +  EI+     +   +V    +  +     +
Sbjct: 1893 SALDEYSTQYQYQDHVNKSQVFEELGQNAILNEIAKPLIKRTSLLVHQQNNSFRDSELAV 1952

Query: 1789 NNDQHNSPGVMQTAANIHKVDAPLEFIKHVCAAFALDQNVQHDVLVMRKNLLKYVRVREF 1848
            + +  N PG     +N       L F+K +CA F L +    DV ++R++LL+ + + EF
Sbjct: 1953 DFEVPNLPGSYLEISN-----PVLLFVKCICAIFELVKEFSLDVRMLRRDLLRTLDISEF 2007

Query: 1849 APEAEFRDPCPSFILPNVICSYCNDCRDLDLCRDMALLAQD------WHCAMPQCGQPYD 1902
            +PE+ F++P  S++L +VIC  C   RD+DLCRD  L + D      +     QC   Y+
Sbjct: 2008 SPESIFQNPSRSYVL-SVICQSCGFLRDIDLCRDNDLFSFDQFGKRMFVLKCTQCFSEYN 2066

Query: 1903 REVMENALLQIVRQRERLYHLQDLVCIRCNQVKAAHLAEQCACAGSFRCKEDASDFRSKM 1962
            +  +E  L+  V+    +Y +QD  C +C ++K ++L E C C+G++    D   ++   
Sbjct: 2067 KLAIEEMLIGKVQHMMMIYQIQDFRCEKCKKIKESNLQEYCTCSGNWVSTIDY--YQDLF 2124

Query: 1963 QIFLNIANRQGFQLLQE 1979
             IF NIA    F++L++
Sbjct: 2125 AIFNNIAVAYEFKMLED 2141


>gi|391871875|gb|EIT81024.1| DNA polymerase epsilon, catalytic subunit A [Aspergillus oryzae
            3.042]
          Length = 2238

 Score = 1313 bits (3398), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 687/1405 (48%), Positives = 922/1405 (65%), Gaps = 111/1405 (7%)

Query: 27   LEAKLGYDLFSEGDKRLGWLLTFASSSLEDEDTRKVYSCIDLYFVSQDGSTFKSKYKFRP 86
            ++  LG+  F  G+KR+GWL    S+S+ED +     + +D YF+  +G +FK+  ++ P
Sbjct: 117  IDESLGFPRFESGEKRVGWLTNMHSTSVEDPNIPGGRAGVDYYFLEDNGGSFKATVEYDP 176

Query: 87   YFYAATKEKMEMDVEAYLRRRYESQIADIEILEKEDLDLKNHLSGLHKSYLKISFDTVQQ 146
            YF  A K+  E +VE + RR +E  I  +  +EKEDL L NHL G  +++L++ F  V  
Sbjct: 177  YFLIAVKKGHEAEVEEWCRRMFEGLIKKVTRVEKEDLKLPNHLLGHRRTFLQMYFANVSH 236

Query: 147  LMDVKKDLLHVVERNQAKFDAAEAYESILTGKREQRPQDFLDCIVDLREYDVPYHIRFAI 206
            L++V++ LL + E+N+   +  + Y  I                            RFA 
Sbjct: 237  LLEVRRTLLPLAEKNKKNVNVMDTYVEI---------------------------SRFAK 269

Query: 207  DNDVRCGQWYDVSISSTGPLLEKRVDLLQRAEVHVCAFDIETTKLPLKFPDADYDIIMMI 266
                         IS T   +E+RV   QR +  V AFDIETTKLPLKFPD+  D IMMI
Sbjct: 270  HG----------VISLT--CIEERV---QRPDPVVLAFDIETTKLPLKFPDSVIDQIMMI 314

Query: 267  SYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNVNNEIELLRLWFAHMQEVKP 326
            SYM+DGQG+LI NRE V EDI D EYTPKPE+ G F + N  +E  +L  +F H++E KP
Sbjct: 315  SYMIDGQGFLITNREIVSEDINDFEYTPKPEYYGPFMIFNEPDERSVLERFFGHIKEAKP 374

Query: 327  GIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDKNQGECRAKFAC-HLDCFAWVKRD 385
             +  TYNGD+FDWPF+E RA+  G  M  E+GF+  KN  +      C H+DCFAWV RD
Sbjct: 375  TVIATYNGDFFDWPFVEARASVLGIDMYTEIGFR--KNSEDIYQSDHCVHMDCFAWVNRD 432

Query: 386  SYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQMMASYSVSDAVATYYLYMTYV 445
            SYLPQGS+GLKAVT AKLGYDP E++PE M  +A E+PQ +A YSVSDAVATYYLYM YV
Sbjct: 433  SYLPQGSRGLKAVTVAKLGYDPDELDPELMTPYASERPQTLAEYSVSDAVATYYLYMKYV 492

Query: 446  HPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVICPNKHQSDPEKFYRNHLLE 505
            HPFIFSL TI+P++PD+ LRKG+GTLCEMLLMVQAY+  ++ PNKH+  PE FY  HLLE
Sbjct: 493  HPFIFSLCTIVPLNPDDTLRKGTGTLCEMLLMVQAYQGEIVLPNKHKEPPEAFYEGHLLE 552

Query: 506  SETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQLLNNLDRDLQYAIKVEGKMDLESVSN 565
            SETY+GGHVE +E+GVFRSD+P +FK+DP+A ++LL +LD  L+++I+VE K  L+ V N
Sbjct: 553  SETYVGGHVESIEAGVFRSDIPVTFKIDPTAIDELLRDLDAALKFSIEVEEKKSLDDVVN 612

Query: 566  YDEVKNAIMEKLLRLQEEPIREECPLIYHLDVAAMYPNIILTNRLQPPSIVTDEVCTACD 625
            Y+EVK  I + L+ L+E P R+E P IYHLDVA+MYPNII TNRLQP +++ +  C ACD
Sbjct: 613  YEEVKGQISKLLIALKENPNRDENPFIYHLDVASMYPNIITTNRLQPDAMIQESNCAACD 672

Query: 626  FNRPGKTCLRKLEWVWRGEIFMGKRSDYYHLKKQIESE-FVDGTNGHLSKSFLDLPKMEQ 684
            FNRPGKTC R++ W WRGE    KR +Y  +++ + +E F   T     + F D+   EQ
Sbjct: 673  FNRPGKTCDRRMPWAWRGEFLPAKRDEYNMVRQAVANERFPGKTKNSPMRLFSDMSAEEQ 732

Query: 685  QSRLKDRLKKYCQKAYKRVLDKPVTELREAGICMRENSFYVDTVRSFRDRRYEYKGLNKV 744
             + +K RL+ Y +K Y ++ D   T +REA IC REN FYV+TVR+FRDRRY++KG  KV
Sbjct: 733  SAIVKKRLQDYSKKIYHKIHDSK-TIVREAIICQRENPFYVNTVRNFRDRRYDFKGKQKV 791

Query: 745  WKGKLSEAKASGNSIK-IQEAQDMVVLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAG 803
            WK K    K+SG S   I+EA+ M++L+DSLQLAHK ILNSFYGYVMRKG+RWYS+EMAG
Sbjct: 792  WKNKTDSLKSSGASAADIEEAKKMIILFDSLQLAHKVILNSFYGYVMRKGSRWYSLEMAG 851

Query: 804  VVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLPGSFPENFTFKTKDLKKKLTISYPC 863
            V   TGA+IIQ AR L+E+IG+PLELDTDGIWC+LPGSFPENF+F  K+  KKL ISYPC
Sbjct: 852  VTCLTGARIIQMARELVERIGRPLELDTDGIWCMLPGSFPENFSFTLKN-GKKLGISYPC 910

Query: 864  VMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEFEVDGPYKAMILPASKEEGILIKK 923
            VMLN  V  + TN QYQTLVDP +  YETHS+ SI FEVDGPYKAMILP SKEE   +KK
Sbjct: 911  VMLNHLVHGSYTNHQYQTLVDPKTFRYETHSDNSIFFEVDGPYKAMILPTSKEEDKNLKK 970

Query: 924  RYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFLHGSTIEECYSAVAAVANRWL 983
            RYAVFN DG+LAELKGFE+KRRGELKLIK+FQ ++F  FL G+++EE Y+AVA VA+RWL
Sbjct: 971  RYAVFNHDGSLAELKGFEVKRRGELKLIKIFQTQIFKFFLEGTSLEETYAAVARVADRWL 1030

Query: 984  DLLDNQGKDIADSELIDYISESSTMSKSLADYGEQKSCAVTTARRLSDFLGDTMVKDKGL 1043
            D+L   G  +AD ELI+ ISE+ +M+K+L +YG QKS ++TTARRL++FLG+ MVKDKGL
Sbjct: 1031 DVLYEHGATLADEELIELISENRSMTKTLEEYGSQKSTSITTARRLAEFLGEQMVKDKGL 1090

Query: 1044 RCQYIVACEPQGTPVSERAVPVAIFETDAEIMKFYLRKWCK-TSSDVGIRSIVDWSYYKQ 1102
             C+YI++  P+ TPV+ERA+PVAIF  +  + +F+LRKW K    D   R+++DW YY +
Sbjct: 1091 NCKYIISARPRNTPVTERAIPVAIFSAEENVKRFFLRKWLKDDPGDCDPRTVIDWDYYLE 1150

Query: 1103 RLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLYKKVREKEDKFRQRKLVDIFSSLKKDDF 1162
            RL S +QK+ITIPAA+QKV NPVPRV HPDWL +++  K+DKF+Q K+ D+F+  +K   
Sbjct: 1151 RLGSVVQKLITIPAALQKVRNPVPRVAHPDWLQRRINVKDDKFKQIKMTDVFAKSEK--- 1207

Query: 1163 LNKTCNAETNLMDENVEDLEDF-------PKKRRNSVNGPRPIVRCFEVNNEQKTVKTTD 1215
             N   +  TN++D  V+   D         +K ++S N      R      E  T  + D
Sbjct: 1208 -NPLTDISTNILDHRVQHAGDIGEVIASSTEKLKSSPNSKTSQKRKLP---EGPTKTSLD 1263

Query: 1216 QVDSLRQQLEPSEVSDQQPSSQNAIDTENIDRIVDYKGWLELKKRKWKDNLDR--RKKQK 1273
               SL  ++ P  ++D                  DY G+L+ +K+KWK       R++Q 
Sbjct: 1264 PFASLPSRMPP--MAD------------------DYVGFLKYQKQKWKIQKQARIRRRQL 1303

Query: 1274 LGSLRASHQANGVSESLGDMINHKEAQRRTGVGSYFRRQETAMTRCHWQIIQLVPSSQSG 1333
             G      + N  ++SL  +               FR Q   +    WQ++QL  +++ G
Sbjct: 1304 FG-----ERTNIANDSLSHL---------------FRNQAELLYISTWQVLQLSETTRPG 1343

Query: 1334 VFLAWVVVEGIMVRIPITVPRLFYLNSK-----DPIVEKFPGRRVNKTLPHGRRSFNLIE 1388
            +  A+V+++  +  + + VPR  Y+N K     D  V      +VN TLP+G  S +L +
Sbjct: 1344 IVRAFVLIDKKIHTLTVKVPRQMYINLKRESLPDVDVPDCEVEKVNHTLPNGHPSVHLFK 1403

Query: 1389 VMIDEDQFRKESKKLAALLADPEVE 1413
            + + E+ + +E+ K+  LL  P +E
Sbjct: 1404 LTLSEETYLREADKMDTLLQHPSIE 1428



 Score =  248 bits (634), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 172/629 (27%), Positives = 299/629 (47%), Gaps = 64/629 (10%)

Query: 1407 LADPEVEVLGWQQNAAKIGMQRCAASSQWFNERISLARYAHI------------------ 1448
            ++D ++  LGWQ   A+  +      S W      LARY  +                  
Sbjct: 1623 VSDMDLPPLGWQAFIARRLVTHYLYLSAWIQHLTMLARYGDVPLCNLESDDPRYLIDISY 1682

Query: 1449 ----------LWISDDGVPDLGGTSEEDECFA-DEVHQPVLTYPGAYRKVSVELKIHHLS 1497
                      LW S    PD  G  ++D     ++V  P +  P AY  V +EL++ +L+
Sbjct: 1683 ARRLQQNNVVLWWSSGPRPDHAGYEKDDITGPLEKVSMPSVNVPSAYTTVCIELEVRNLA 1742

Query: 1498 VNALLKSNQVNEMEGGGLFGFDQDMNSGPYNNELCGFDETTSSAPAFRVVKQLIQRCLTD 1557
            +N +L S+ +NEMEG        + ++    + +   ++  +SA A  V++++++   T+
Sbjct: 1743 INTILTSSIINEMEGADTLLASSEPSADSNGSGVLYSEKAFASAGAI-VLREMVKHWWTE 1801

Query: 1558 AVTSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEFRKLGATIIF 1617
            A   GN  AD ++QHL RW+ SP S L+D  LH  +  + +K F  L+AEFR++G+ IIF
Sbjct: 1802 AC-EGNNMADIMVQHLIRWVESPVSCLYDRSLHNYVRMLSRKSFQRLMAEFRRVGSNIIF 1860

Query: 1618 ANFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLFMDQYNYGGI 1677
            A+ +++++ T K ++  A AY   +LK+++    F +I+LE   +W  L++ D+YNYGG 
Sbjct: 1861 ASSTRLLLQTTKAEVGNAYAYSQYVLKSIRANPSFHFIDLEIKEYWDYLIWYDEYNYGGK 1920

Query: 1678 PARADESLDDDSQVDIVSSWNIAEYLPKEIQDHFVLVVSEFMYI--PWKHAQKLAASRAS 1735
              R +    D+ +++ V  W ++ +LP  +Q  F   V E++ +    KH +   +S   
Sbjct: 1921 GCR-EVVGSDEQELETVMHWQLSRFLPGPMQTIFHDWVVEYIDLMHGVKHPESADSSTPR 1979

Query: 1736 LQEGSSCTPS------ITVAAAENFESHIVQYVKGEISSYFTGKLLSIVRDAIHHMKKMN 1789
            + +     P+      ++   AE F   + + + G         L+   R+ + H +  +
Sbjct: 1980 MTQIPIGRPTDEDDDEVSAVLAEKFSKPLKKQISG---------LIRRQREEMLHPELAS 2030

Query: 1790 NDQHNS-PGVMQTAANIHKVDAPLEFIKHVCAAFALDQNVQHDVLVMRKNLLKYVRVREF 1848
            +      PGV+ +  N  K +  LE +K +    +L +    +  ++R+ LL    VREF
Sbjct: 2031 DYLFPVLPGVL-SDPNEEKRNPVLELVKMLMQVLSLSKTTSLENRLLRRELLAMFEVREF 2089

Query: 1849 APEAEFRDPCPSFILPNVICSYCNDCRDLDLCRDMALL-----------AQDWHCAMPQC 1897
            + E  F +P  S  LP + CS C   RDLDLCRD  +L            + W C  P C
Sbjct: 2090 SKEGRFENPAASLKLPELTCSACCLIRDLDLCRDEDVLPDPGSDPSKAVTKPWRC--PFC 2147

Query: 1898 GQPYDREVMENALLQIVRQRERLYHLQDLVCIRCNQVKAAHLAEQCACAGSFRCKEDASD 1957
               YDR   E  L+  V      +  QDL C +C  +K +   E C+C+G +    D ++
Sbjct: 2148 QTEYDRLAQEEILIGQVHGLIVGWQTQDLKCSKCGGLKVSEFMEHCSCSGKWVETMDRAE 2207

Query: 1958 FRSKMQIFLNIANRQGFQLLQECTSWILE 1986
               K+++  ++A   G +LL+     +LE
Sbjct: 2208 AEKKLRVLNSVAKFHGLKLLENVVEGVLE 2236


>gi|50291249|ref|XP_448057.1| hypothetical protein [Candida glabrata CBS 138]
 gi|74609249|sp|Q6FNY7.1|DPOE_CANGA RecName: Full=DNA polymerase epsilon catalytic subunit A; AltName:
            Full=DNA polymerase II subunit A
 gi|49527368|emb|CAG61008.1| unnamed protein product [Candida glabrata]
          Length = 2217

 Score = 1313 bits (3397), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 690/1461 (47%), Positives = 947/1461 (64%), Gaps = 116/1461 (7%)

Query: 10   DGRRTKKQKLIRSAE-EELEAKLGY--------------DLFSEGDKRLGWLLTFASSSL 54
            +G     Q+L+++A+ ++++A +G+              D   +   R GWL+    + +
Sbjct: 18   NGYAVTAQQLLQAAKVDDIDAMMGFERYVPPQYNGRVDPDRLDQVPGRTGWLVNMHPTLI 77

Query: 55   EDE----------DTRKVYSCIDLYFVSQDGSTFKSKYKFRPYFYAATKEKMEM-DVEAY 103
             +E           +    + +D YF+ ++G +FKS   + PYF+    +   + DVE +
Sbjct: 78   SEEIASGGGSDYNPSAAGIAGVDFYFLDEEGGSFKSSITYDPYFFVTVTDDARLNDVEEF 137

Query: 104  LRRRYESQIADIEILEKEDLDLKNHLSGLHKSYLKISFDTVQQLMDVKKDLLHVVERNQA 163
            L++  E+ + DI  L+KEDL L NHL GL KS +K+SF    QL + +K L  ++  N++
Sbjct: 138  LKKYLETCLKDISTLKKEDLKLDNHLLGLQKSLIKLSFVNSNQLFEARKLLRPILAENES 197

Query: 164  KFDAAEAYE--SILTGK-------------REQRPQDFLDCIVDLREYDVPYHIRFAIDN 208
                   ++  +I  G                Q  +D    I D+REYDVPYH+R +ID 
Sbjct: 198  NKQQRNVFKHSNISNGNGMLSSNVNRFASSSVQDKKDAKQYIEDIREYDVPYHVRVSIDK 257

Query: 209  DVRCGQWYDVSISSTGPLLEKRVDLLQRAEVHVCAFDIETTKLPLKFPDADYDIIMMISY 268
            D+R G+WY V+    G  +    D +  A+  V AFDIETTK PLKFP+A  D +MMISY
Sbjct: 258  DIRVGKWYKVT--HEGFFVWP--DKVAFADPVVLAFDIETTKAPLKFPEASVDQVMMISY 313

Query: 269  MLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNVNNEIELLRLWFAHMQEVKPGI 328
            M+DG G+LI NRE + EDIED EYTPKPE +G+  + N  +E+ +L+ +F H+++V+P +
Sbjct: 314  MIDGDGFLITNREIISEDIEDFEYTPKPELQGHVTIFNEVDELAVLQRFFEHIRDVRPTV 373

Query: 329  YVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDKNQGECRAKFACHLDCFAWVKRDSYL 388
              T+NGD+FDWPF+E RA+  G  M EE+GF  D ++GE ++ +  H+DCF WVKRDSYL
Sbjct: 374  ISTFNGDFFDWPFIEKRASVRGLDMFEEIGFAPD-SEGEYKSSYCVHMDCFRWVKRDSYL 432

Query: 389  PQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQMMASYSVSDAVATYYLYMTYVHPF 448
            PQGSQGLKAVT+AKLGY+P+E++PE M  +A E+PQ ++ YSVSDAVATYYLYM YVHPF
Sbjct: 433  PQGSQGLKAVTQAKLGYNPIELDPELMTPYAYERPQQLSEYSVSDAVATYYLYMKYVHPF 492

Query: 449  IFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVICPNKHQSDPEKFYRNHLLESET 508
            IFSL TIIP++PDEVLRKG+GTLCEMLLMVQAY+ N++ PNKH    E+FY  HLLESET
Sbjct: 493  IFSLCTIIPLNPDEVLRKGTGTLCEMLLMVQAYQGNILLPNKHTDPLERFYDGHLLESET 552

Query: 509  YIGGHVECLESGVFRSDLPTSFKLDPSAYEQLLNNLDRDLQYAIKVEGKMDLESVSNYDE 568
            Y+GGHVE LE+GVFRSDL T FK+D SA ++L+ +L   L++A++VE K  +E V+N++E
Sbjct: 553  YVGGHVESLEAGVFRSDLATEFKIDTSAIDELIEDLPHALKFAVEVENKAKMEDVTNFEE 612

Query: 569  VKNAIMEKLLRLQEEPIREECPLIYHLDVAAMYPNIILTNRLQPPSIVTDEVCTACDFNR 628
            +K  I E+LL L+E   R E PLIYH+DVA+MYPNI+ TNRLQP SI T++ C +CDFNR
Sbjct: 613  IKEQIKEQLLELKENNKRHEKPLIYHVDVASMYPNIMTTNRLQPDSIKTEKDCASCDFNR 672

Query: 629  PGKTCLRKLEWVWRGEIFMGKRSDYYHLKKQIESEFVDGTNGHLSKSFL---DLPKMEQQ 685
            PGK+C R+L+W WRGE +  K  +Y  +K+ +++E     N    K +L   +L   EQ 
Sbjct: 673  PGKSCARRLKWAWRGEFYPAKSDEYNMIKRALQNETFPNKNKFSKKPYLTFDELSYSEQV 732

Query: 686  SRLKDRLKKYCQKAYKRVLDKPVTELREAGICMRENSFYVDTVRSFRDRRYEYKGLNKVW 745
            + +K RL +Y +K Y R+    + E REA +C REN FYV+TV+SFRDRRYE+KGL K W
Sbjct: 733  AHIKKRLTEYSKKVYHRIKVSEIVE-REAIVCQRENPFYVNTVKSFRDRRYEFKGLAKKW 791

Query: 746  KGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVV 805
            KGK+S    +    K  EA  MVVLYDSLQLAHK ILNSFYGYVMRKG+RWYSMEMAG+ 
Sbjct: 792  KGKMSSIDRNDKHGK-DEANKMVVLYDSLQLAHKVILNSFYGYVMRKGSRWYSMEMAGIT 850

Query: 806  TYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLPGSFPENFTFKTKDLKKKLTISYPCVM 865
              TGA IIQ AR L+E++G+PLELDTDGIWC+LP SFPENF  K ++  KKL +SYPC M
Sbjct: 851  CLTGATIIQMARALVERVGRPLELDTDGIWCILPKSFPENFFLKLEN-GKKLFVSYPCSM 909

Query: 866  LNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEFEVDGPYKAMILPASKEEGILIKKRY 925
            LN  V +  TN QYQ LVDPV   YETHSE +I FEVDGPYKAMILP SKEEG  IKKRY
Sbjct: 910  LNYRVHQKFTNHQYQELVDPVKHKYETHSENTIFFEVDGPYKAMILPTSKEEGKGIKKRY 969

Query: 926  AVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFLHGSTIEECYSAVAAVANRWLDL 985
            AVFN+DG+LAELKGFE+KRRGEL+LIK FQ+++F  FL G T+EECY++VAAV+NRWLD+
Sbjct: 970  AVFNEDGSLAELKGFELKRRGELQLIKNFQSDIFKVFLDGKTLEECYASVAAVSNRWLDI 1029

Query: 986  LDNQGKDIADSELIDYISESSTMSKSLADYGEQKSCAVTTARRLSDFLGDTMVKDKGLRC 1045
            LDN+G  + D +L+  I E+ +MSKSL +Y  QKS ++TTA+RL +FLG+ MVKDKGL+C
Sbjct: 1030 LDNKGSMLEDEDLVSLICENRSMSKSLKEYEGQKSTSITTAKRLGEFLGEDMVKDKGLQC 1089

Query: 1046 QYIVACEPQGTPVSERAVPVAIFETDAEIMKFYLRKWCKTSS--DVGIRSIVDWSYYKQR 1103
            +YI++ +P G PV+ERA+PVAIF +D  + + +LR+W    S  +  IR+I+DW YY++R
Sbjct: 1090 KYIISSKPHGAPVTERAIPVAIFSSDINVKRSFLRRWTMDHSLDNFDIRTILDWGYYRER 1149

Query: 1104 LSSAIQKIITIPAAMQKVSNPVPRVVHPDWLYKKVREKEDKFRQRKLVDIFSSLKKDDFL 1163
            L+S IQKIITIPAA+Q V NPVPRV HPDWL +++  KEDKF+Q KL         + FL
Sbjct: 1150 LASVIQKIITIPAALQNVPNPVPRVEHPDWLKRRIAVKEDKFKQSKL---------ERFL 1200

Query: 1164 NKTCNAETNLMDENVEDL--EDFPKKRRNSVNGPRPIVRCFEVNNEQKTVKTTDQVDSLR 1221
            +K+     N   +++E+L  ED   KR          ++  +V +  K  +  D    ++
Sbjct: 1201 SKSSQEPQNRRIKDIEELFHEDDDIKR----------IKLAKVTSRNKNKRNRD----VQ 1246

Query: 1222 QQLEPSEVSDQQPSSQNAIDTENIDRIVDYKGWLELKKRKWKDNLDRRKKQKLGSLRASH 1281
            +  E S V    P++  +++        DY  WL  +K KWK  + RR + +   L    
Sbjct: 1247 KNDEESLV---LPATMPSMEE-------DYVSWLSYQKIKWK--IQRRDRIRRTQLFGK- 1293

Query: 1282 QANGVSESLGDMINHKEAQRRTGVGSYFRRQETAMTRCHWQIIQLVPSSQSGVFLAWVVV 1341
                            E   R+ +GS  R+Q        W+++Q   + ++G   A+V++
Sbjct: 1294 --------------SGETNSRSVLGSMIRKQAEMFANGSWEVLQYRDNYEAGAVDAYVII 1339

Query: 1342 EGIMVRIPITVPRLFYLNSKD---PI--VEKFPGRRVNKTLPHGRRSFN-----LIEVMI 1391
             G +  + I VPR  Y+N K    P+  ++     R N  LP+  R  N     L ++ +
Sbjct: 1340 NGKVQVLKIYVPRTLYINFKTDSVPLKKIKNCEVERSNAILPNDARINNDSASPLFKLTL 1399

Query: 1392 DEDQFRKESKKLAALLADPEV 1412
             E  +  E +   ++L D  V
Sbjct: 1400 SEQVYLDELEDSGSVLNDESV 1420



 Score =  203 bits (516), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 140/542 (25%), Positives = 259/542 (47%), Gaps = 21/542 (3%)

Query: 1448 ILWISDDG-VPDLGGTS----EEDECFADEVHQPVLTYPGAYRKVSVELKIHHLSVNALL 1502
            ILW ++   +PD GG      +      +++  P +  P  Y  V +E+ I +L VN +L
Sbjct: 1683 ILWWNEQSPLPDHGGMENDFDQNTSWIMNDLDFPNINVPDVYDNVVLEVSIENLVVNTIL 1742

Query: 1503 KSNQVNEMEGGGLFGFDQ-DMNSGPYNNELCGFDETTSSAPAFRVVKQLIQRCLTDAVTS 1561
             S  +NE EG  L   +  D++  P  N   G  + + S  A  V+K L++    D    
Sbjct: 1743 CSTLINEAEGSDLVDMNTVDVSDKPVGNN-QGIVQDSFSHDALAVLKSLLKEWW-DRALE 1800

Query: 1562 GNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEFRKLGATIIFANFS 1621
             N+ AD ++  L  W+ S  SKL D  L   +H + +K    L+ EF +LG+ I+ A+ +
Sbjct: 1801 KNITADLLVNSLVSWVYSTDSKLFDGSLRYHIHNLTKKSLFQLMNEFNELGSFIVSADRN 1860

Query: 1622 KVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLFMDQYNYGGIPARA 1681
            +++I T K       AY   ++K++++  +F +++L    +W  L++MD+YN+ G+    
Sbjct: 1861 RLLIKTNKISPETCYAYSHYMIKSIRSNPMFTYLDLNIERYWDLLIWMDKYNFSGLSCSQ 1920

Query: 1682 DESLDDDSQVDIVSSWNIAEYLPKEIQDHF---VLVVSEFMYIPWKHAQKLAASRASLQE 1738
             E  +        S+W I  YLP+  Q  F    +++ + M    K  +    S    Q 
Sbjct: 1921 IEEREKQDYT-AYSNWQIKYYLPRIYQSEFEDWAMIILDSMV---KTKRAFLESSYGTQR 1976

Query: 1739 GSSCTPSITVAAAENFESHIVQYVKGEISSYFTGKLLSIVRDAIHHMKKMNNDQHNSPGV 1798
             +     +T  +     S +  + K EI      ++  + R+    +      +  +  +
Sbjct: 1977 ATQIVTGLTPQSDTEDISPLSSFSK-EIGKPLLQRVNKLFRNQREFILDPGFSEDYAFPI 2035

Query: 1799 MQTAANIHKVDAPLEFIKHVCAAFALDQNVQHDVLVMRKNLLKYVRVREFAPEAEFRDPC 1858
            +   ++I   D  LEFIK +     L ++   +V  +RK +LK++ +REFA EAEF++P 
Sbjct: 2036 L-PGSHIKMDDPLLEFIKSLFQILLLSKSTTLEVRQLRKEVLKFLEIREFAKEAEFQNPS 2094

Query: 1859 PSFILPNVICSYCNDCRDLDLCRDMALLAQDWHCAMPQCGQPYDREVMENALLQIVRQRE 1918
             S ++  ++C YC+   DLDLCRD   L   + C  P+C +  +  +++  ++Q +    
Sbjct: 2095 DSLVINGILCEYCSYVSDLDLCRDG--LDGKFQC--PRCDKSINDSLLQEHMIQNLAIEY 2150

Query: 1919 RLYHLQDLVCIRCNQVKAAHLAEQCACAGSFRCKEDASDFRSKMQIFLNIANRQGFQLLQ 1978
            + Y  QDL C +C+ VK   ++  C C+G++ C        + ++I+  +A    + L++
Sbjct: 2151 QTYITQDLRCEKCHTVKRDLMSTNCNCSGNWVCTTKPEKLSNIVKIYKQVAEFYNYSLVK 2210

Query: 1979 EC 1980
              
Sbjct: 2211 NA 2212


>gi|150864288|ref|XP_001383043.2| DNA-directed DNA polymerase epsilon, catalytic subunit A
            [Scheffersomyces stipitis CBS 6054]
 gi|149385544|gb|ABN65014.2| DNA-directed DNA polymerase epsilon, catalytic subunit A
            [Scheffersomyces stipitis CBS 6054]
          Length = 2222

 Score = 1312 bits (3395), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 690/1452 (47%), Positives = 933/1452 (64%), Gaps = 92/1452 (6%)

Query: 3    RRRWDRQDGRR---------------TKKQKLIRSAEEELEAKLGYDLFSEGDK-----R 42
            R R  RQD R                TKK+ + R   + L++ +G+     G+      R
Sbjct: 27   RNRQPRQDARAIDPYIANNPMLNDSITKKELVARI--DALDSMMGFSRIEHGEADGMKPR 84

Query: 43   LGWLLTFASSSLEDEDTRKVYSCIDLYFVSQDGSTFKSKYKFRPYFYAATKEKMEMDVEA 102
             GWL+   ++++  ++    YS +D YF+ ++G +FK+  +F PYF+       E +VE 
Sbjct: 85   KGWLVNMHATTIPSDEYLTGYSGVDYYFLDEEGGSFKTTLQFDPYFFLDLIPGHESEVEE 144

Query: 103  YLRRRYES-QIADIEILEKEDLDLKNHLSGLHKSYLKISFDTVQQLMDVKKDLLHVVERN 161
            +L++  E   + ++  + KEDL L NHL GL K+ +K++F  VQ L+  ++ L  +++ N
Sbjct: 145  WLKKFLEECHVKNLSRVIKEDLALPNHLVGLQKNLIKLTFHNVQDLLAARRLLSPIIKDN 204

Query: 162  QAKFDAAEAYESILTGKREQRPQDFLDCIVD-------LREYDVPYHIRFAIDNDVRCGQ 214
            QAK  + + Y  +          DF D I D       +REYD+PYH+R +ID +VR G+
Sbjct: 205  QAKKGSRDIYNVMNFTNGNSNNSDFNDSIADPATLIDDMREYDMPYHVRVSIDINVRVGK 264

Query: 215  WYDVSISSTGPLLEKRVDLLQRAEVHVCAFDIETTKLPLKFPDADYDIIMMISYMLDGQG 274
            WYDV +  +   L +  D +  A+  V AFDIETTK PLKFPDA  D IMMISYM+DG G
Sbjct: 265  WYDVYVKHSQVTLVEDKDKIAFADPVVLAFDIETTKAPLKFPDAKIDQIMMISYMIDGDG 324

Query: 275  YLIINRECVGEDIEDLEYTPKPEFEGYFKVTNVNNEIELLRLWFAHMQEVKPGIYVTYNG 334
            +LI NRE + EDIED EYTPKPE+ G F + N  +E  +L  ++ H++E KP +  T+NG
Sbjct: 325  FLITNREIISEDIEDFEYTPKPEYPGMFTIFNEPDEKHVLMRFYEHIREAKPTVIATFNG 384

Query: 335  DYFDWPFLETRAAHHGFKMSEELGFQCDKNQGECRAKFACHLDCFAWVKRDSYLPQGSQG 394
            D+FDWPF+E R   H   M +E+GF  D N+GE ++K+  H+DCF WVKRDSYLPQGSQG
Sbjct: 385  DFFDWPFVENRTRFHDMDMFDEIGFAKD-NEGEYKSKYCVHMDCFRWVKRDSYLPQGSQG 443

Query: 395  LKAVTKAKLGYDPLEVNPEDMVRFAKEKPQMMASYSVSDAVATYYLYMTYVHPFIFSLAT 454
            LKAVT AKLGY+P E++PE M  +A E PQ+++ YSVSDAVATYYLY  YVHPFIFSL T
Sbjct: 444  LKAVTTAKLGYNPTELDPELMTPYAYEHPQLLSEYSVSDAVATYYLYFKYVHPFIFSLCT 503

Query: 455  IIPMSPDEVLRKGSGTLCEMLLMVQAYKANVICPNKHQSDPEKFYRNHLLESETYIGGHV 514
            IIP++PDEVLRKG+GTLCEMLL VQAY+  ++ PNKH    E+FY  HLLESETY+GGHV
Sbjct: 504  IIPLNPDEVLRKGTGTLCEMLLSVQAYENGILLPNKHSDPIERFYDGHLLESETYVGGHV 563

Query: 515  ECLESGVFRSDLPTSFKLDPSAYEQLLNNLDRDLQYAIKVEGKMDLESVSNYDEVKNAIM 574
            E LE+GVFRSD+P  FK+DP+A ++LL+NL   +++ I+VE    +E ++N+DEV N I 
Sbjct: 564  ESLEAGVFRSDIPYDFKVDPTAIDELLHNLHSSIKFCIEVENNKKMEQITNFDEVYNDIK 623

Query: 575  EKLLRLQEEPIREECPLIYHLDVAAMYPNIILTNRLQPPSIVTDEVCTACDFNRPGKTCL 634
             KLL L+E P R+E PLIYH+DVA+MYPNI+ +NRLQP S+ ++E C ACDFNRPGK C 
Sbjct: 624  SKLLALKETPKRKEEPLIYHVDVASMYPNIMTSNRLQPDSMKSEEDCAACDFNRPGKNCD 683

Query: 635  RKLEWVWRGEIFMGKRSDYYHLKKQIESEFVDGTNGHL-SKSFLDLPKMEQQSRLKDRLK 693
            R+L W WRGE F  + ++Y  +K+ +++E    +   L  +SF +L   EQ + +K R+ 
Sbjct: 684  RRLPWSWRGEYFPAEMNEYNMIKRTLQNETFPASRPWLPERSFDELSYTEQATLIKKRIS 743

Query: 694  KYCQKAYKRVLDKPVTELREAGICMRENSFYVDTVRSFRDRRYEYKGLNKVWKGKLSEAK 753
             Y +K Y RV    V   REA IC REN FYV+TV SFRDRRYE+KGL KVWKGK+S+  
Sbjct: 744  DYSRKVYHRVKKSKVVN-REAIICQRENPFYVNTVISFRDRRYEFKGLAKVWKGKVSKID 802

Query: 754  ASGNSIKIQEAQDMVVLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKII 813
               +SI   EA+ MVVLYDSLQLAHK ILNSFYGYVMRKG+RWYSMEMAGV   TGA II
Sbjct: 803  KH-DSIARDEAKKMVVLYDSLQLAHKVILNSFYGYVMRKGSRWYSMEMAGVTCLTGATII 861

Query: 814  QNARLLIEKIGKPLELDTDGIWCVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARN 873
            Q AR L+E+IG+PLELDTDGIWC+LP SFPEN+  K KD  KK+ + YPC MLN  V   
Sbjct: 862  QMARTLVERIGRPLELDTDGIWCILPKSFPENYNLKCKD-GKKIFLEYPCSMLNYLVHEQ 920

Query: 874  NTNDQYQTLVDPVSKTYETHSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGT 933
             TN QYQ LVDP +  Y+T S+ SI FEVDGPYKAMILP SKEEG  +KKRYAVFNDDG+
Sbjct: 921  FTNHQYQDLVDPATFKYKTRSDNSIFFEVDGPYKAMILPTSKEEGKGLKKRYAVFNDDGS 980

Query: 934  LAELKGFEIKRRGELKLIKVFQAELFDKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDI 993
            LAELKGFE+KRRGEL+LIK FQ+++F  FL GST+E+CY AVA VAN WLD+LD +G  +
Sbjct: 981  LAELKGFELKRRGELQLIKNFQSDIFKLFLEGSTLEQCYQAVATVANNWLDVLDTKGGML 1040

Query: 994  ADSELIDYISESSTMSKSLADYGEQKSCAVTTARRLSDFLGDTMVKDKGLRCQYIVACEP 1053
             D +LI+ I E+ +MSKSL +YG+QKS ++TTA+RL +FLG+ MVKD GL  +YI++ +P
Sbjct: 1041 EDEDLIELICENRSMSKSLEEYGDQKSTSITTAKRLGEFLGEEMVKDAGLATKYIISAKP 1100

Query: 1054 QGTPVSERAVPVAIFETDAEIMKFYLRKWCKTSS--DVGIRSIVDWSYYKQRLSSAIQKI 1111
             G PV+ERAVPV+IF +D +  +FYL+KW K  S    G R ++DW YY +RLSS +QKI
Sbjct: 1101 IGAPVTERAVPVSIFSSDKK--EFYLKKWLKDPSLQKFGPRDVIDWGYYHERLSSVVQKI 1158

Query: 1112 ITIPAAMQKVSNPVPRVVHPDWLYKKVREKEDKFRQRKLVDIFSSLKKDDFLNKTCNAET 1171
            ITIPAA+Q V NPVPRV HPDWL KK+  KED  +Q  +   F S  K + + K      
Sbjct: 1159 ITIPAALQDVKNPVPRVAHPDWLQKKIHTKEDSRQQSSISTFFGSANKKEVMEKQVKEIK 1218

Query: 1172 NLMDENVEDLEDFPKKRRNSVNGPRPIVRCFEVNNEQKTVKTTDQVDSLRQQLEPSEVSD 1231
             + D  +ED  D      ++V  P+  +                +V S +++   + +++
Sbjct: 1219 EIKD--IEDFGDI-----DTVGAPKSRI---------------GKVVSRKRRAARNAIAE 1256

Query: 1232 QQPSSQNA--IDTENIDRIVDYKGWLELKKRKWK---DNLDRRKKQKLGSLRASHQANGV 1286
             +   +N+  ++      I DY+ +L+ +K KWK    N +RRKK   GS          
Sbjct: 1257 AEEDERNSAILNAPCPSMIEDYECFLQYQKAKWKVQAGNRERRKKI-FGS---------- 1305

Query: 1287 SESLGDMINHKEAQRRTGVGSYFRRQETAMTRCHWQIIQL-VPSSQSGVFLAWVVVEGIM 1345
                     + E+  R+ VG   R+Q   +   +W+I++     S+ G     +   G +
Sbjct: 1306 ---------NSESSHRSTVGGMIRKQAENVAGSNWEILEYKADPSKPGEIKVHISAVGKI 1356

Query: 1346 VRIPITVPRLFYLNSKDPIV--EKFPG---RRVNKTLPHGRRSFNLIEVMIDEDQFRKES 1400
                  +P+  Y   K  +   ++  G    R N  LP+G    NL ++++ E +F +E 
Sbjct: 1357 HTFTFHIPKKIYAAYKSELQPRKQISGCEIERSNSILPNGHDGSNLYKLIMSESRFNEEI 1416

Query: 1401 KKLAALLADPEV 1412
              + + L D  +
Sbjct: 1417 TDVESALQDSNI 1428



 Score =  258 bits (660), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 180/674 (26%), Positives = 313/674 (46%), Gaps = 98/674 (14%)

Query: 1365 VEKFPGRRVNKTL-----PHGRRSFNLIEVMIDEDQFRKESKKLAALLADPEVEVLGWQQ 1419
            + K    R NK L     P+  +  NL+    D    R    +LA       +  +GWQ 
Sbjct: 1580 IGKLHASRSNKALFAVQSPYSSKILNLLSSTSDFPVVRMNVSELA-------LPAVGWQS 1632

Query: 1420 NAAKIGMQRCAASSQWFNERISLARYAHI----------------------------LWI 1451
              +   +      + W    ++LA+Y ++                            LW 
Sbjct: 1633 LISMRVINHYFVLANWIKNLVALAKYGNVPLCNLQIENVGYLIDIEYARRLSQNNIVLWW 1692

Query: 1452 SDDGVPDLGGTSEEDECFADEVHQPVLTYPGAYRKVSVELKIHHLSVNALLKSNQVNEME 1511
            S + +PD GG   +     + ++ P +  P  Y    +E++I +L++N  L S+ +NE E
Sbjct: 1693 SANPLPDHGGFELDKAPDYENLNFPTINNPEIYETACLEVEIGNLTINTFLTSSLINEAE 1752

Query: 1512 GGGLFG----FDQDMNSGPYNNELCGFDETTSSAPAFRVVKQLIQRCLTDAVTSGNVFAD 1567
            G  L      FD+       NN      E + S+PA  +++ +++    DA+ + N+ AD
Sbjct: 1753 GSDLADDGVVFDK-------NNGASTIAEDSFSSPALSILRGMVKEWWDDALKN-NINAD 1804

Query: 1568 AILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEFRKLGATIIFANFSKVIIDT 1627
            +++  L  W+    S L+D  LH  +H +  K    L+ EF+++ + ++FAN +K+II T
Sbjct: 1805 SMMNSLVTWVQRKDSFLYDYSLHYHIHNLTTKALLQLIGEFKRMNSQVVFANRNKLIIQT 1864

Query: 1628 GKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLFMDQYNYGGIPARADESLDD 1687
             K  +  + A+   +LKA +++ LF +++L  + +W  L++MD++N+GG   R  + + D
Sbjct: 1865 TKVSVENSYAFGQYILKAARSKPLFNFLDLNIIKYWDILVWMDEFNFGG---RCCKQITD 1921

Query: 1688 DSQVDI--VSSWNIAEYLPKEIQDHFVLVVSEFMYIPWKHAQKLAASRASLQEGSSCTPS 1745
            D   D+  V+SW I ++LP   +D F     ++M +      K    + +     S TP 
Sbjct: 1922 DDIQDLMPVNSWQIKQFLPVIFRDEF----EDWMVVFLDALTKFKNDKLT-GNTQSGTPR 1976

Query: 1746 ITVAAAENFESHIVQYVKGE---------ISSYFTGKLLSIVRDA----IHHMKKMNNDQ 1792
            +T          IV  +KG+             F G +  + R +    I  +    N+ 
Sbjct: 1977 VT---------QIVHILKGQRKLEAKEEEEEDIFNG-VFEVFRKSLQKRIERIYHRQNEA 2026

Query: 1793 HNSPGVMQ-------TAANIHKVDAPLEFIKHVCAAFALDQNVQHDVLVMRKNLLKYVRV 1845
              +P   Q         +++H  +  LE +K +CA F L +    +V V+RK LL    +
Sbjct: 2027 ILNPEFAQEYEFPKLPGSHLHMKNPALELVKFLCAVFGLSKKRTIEVRVLRKELLSIFDI 2086

Query: 1846 REFAPEAEFRDPCPSFILPNVICSYCNDCRDLDLCRDMALLAQDWHCAMPQCGQPYDREV 1905
            +EF+ EA FR+P  +  +P++IC YCN  RD+D CRD       W+C+   C +PY+R  
Sbjct: 2087 KEFSSEANFRNPSTTLKVPHIICDYCNFIRDVDFCRDSE--KDLWNCS--NCHRPYNRVS 2142

Query: 1906 MENALL-QIVRQRERLYHLQDLVCIRCNQVKAAHLAEQCACAGSFRCKEDASDFRSKMQI 1964
            ME  ++ Q ++   + Y  QD  C +CN V+  +L+  C C+G +      S+   K+ +
Sbjct: 2143 MEEEVITQYIKLITKFYS-QDFKCAKCNSVRVGNLSLFCKCSGKWEETISYSEVEKKLHV 2201

Query: 1965 FLNIANRQGFQLLQ 1978
            F NIAN   FQLL+
Sbjct: 2202 FANIANSYKFQLLK 2215


>gi|301098705|ref|XP_002898445.1| DNA polymerase epsilon catalytic subunit, putative [Phytophthora
            infestans T30-4]
 gi|262105216|gb|EEY63268.1| DNA polymerase epsilon catalytic subunit, putative [Phytophthora
            infestans T30-4]
          Length = 2403

 Score = 1312 bits (3395), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 688/1446 (47%), Positives = 945/1446 (65%), Gaps = 99/1446 (6%)

Query: 37   SEGDKRLGWLLTFASSSLEDE-DTRKVYSCIDLYFVSQDGSTFKSKYKFRPYFYAATKEK 95
             E   +LGWLL   + +L D  + +   S ++LYF+ QDG  FK++  ++PYFY  ++  
Sbjct: 91   GEDHAKLGWLLNLRACTLPDPVEGKNEVSGLELYFLEQDGKAFKTRIIYQPYFYVRSETN 150

Query: 96   MEMDVEAYLRRRYESQIADIEILEKEDLDLKNHLSGLHKSYLKISFDTVQQLMDVKKDLL 155
               +V AY  R++E  +A  E + +EDLD+ +HL+G    Y+K+SF+TV  LM VK++L 
Sbjct: 151  RSQEVIAYCLRQFEGLVAKAERVFREDLDMADHLNGKKALYVKLSFNTVSDLMTVKRELA 210

Query: 156  HVVERNQAKFDAAEAYESILTGK-REQRPQDFL------------------DCIVDLREY 196
             +V RNQ +  A +AYE  L G+ REQ  +D L                    +++LREY
Sbjct: 211  PLVARNQERLQARQAYE--LQGQTREQVTEDDLVFGADADGAKGAGTDESESSLLELREY 268

Query: 197  DVPYHIRFAIDNDVRCGQWYDVSISSTGPL----LEKRVDLLQRAEVHVCAFDIETTKLP 252
            DVPY +R AID D+R G WY V+   T P     ++++ D++ +AE  VCAFDIE TK P
Sbjct: 269  DVPYPMRVAIDLDIRVGAWYHVNYDPTAPYSPSDVKRQKDMVDKAEPVVCAFDIECTKAP 328

Query: 253  LKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNVNNEIE 312
            LKFPDA  D I MISYM+D QGYLI+NRE V E+I+D EYTPK ++ G F V N  NE +
Sbjct: 329  LKFPDAQIDQIYMISYMIDKQGYLIVNREFVSEEIQDFEYTPKEDYPGPFIVFNEENEEQ 388

Query: 313  LLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDKNQGECRAKF 372
            LL+ +F H+ E KP I+VTYNGD+FDWPF++ RA  HG  M+ E+G   D+  GE R + 
Sbjct: 389  LLKRFFEHVIEEKPHIFVTYNGDFFDWPFIDARAQVHGINMAHEIGVSLDERSGEYRGRC 448

Query: 373  ACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQMMASYSVS 432
            + H+D F WVKRDSYLPQGSQGLKAVTK KLGYDP+EV+ EDMV  A+++P  MASYSVS
Sbjct: 449  SVHMDAFCWVKRDSYLPQGSQGLKAVTKYKLGYDPVEVDAEDMVALARDEPLKMASYSVS 508

Query: 433  DAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVICPNKHQ 492
            DAVAT+YLY  YVH F+FSL TIIP+  ++VLRKGSGTLCE LLMV+A++ N+ICPNK  
Sbjct: 509  DAVATFYLYDKYVHLFVFSLCTIIPLGSEDVLRKGSGTLCEALLMVEAFEGNIICPNKQS 568

Query: 493  SD-PEKFYRNHLLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQLLNNLDRDLQYA 551
            S   EKFY+  L+ESETY+GGHVECLESGVFR+D    F+L PSA++QL++N+DRDL ++
Sbjct: 569  SAREEKFYKGRLVESETYVGGHVECLESGVFRADFLYDFQLVPSAFQQLIDNIDRDLTFS 628

Query: 552  IKVEGKMDLESVSNYDEVKNAIMEKLLRLQEEPIREECPLIYHLDVAAMYPNIILTNRLQ 611
            ++VE  + ++ V+NY+EVKN I+++L+ L+E P R+E PLIYHLDVAAMYPNIILTNRLQ
Sbjct: 629  LEVEMNVPVDRVANYEEVKNHIVDRLVGLRERPNRKEQPLIYHLDVAAMYPNIILTNRLQ 688

Query: 612  PPSIVTDEVCTACDFN---------RPGKTCLRKLEWVWRGEIFMGKRSDYYHLKKQIES 662
            P +IV +  C AC +N             +C R+++WVWRG+ +   R +YY +K QIE 
Sbjct: 689  PCAIVNEADCAACAYNTECGRAAIKEKDASCQREMDWVWRGDFYPATRPEYYSIKTQIEY 748

Query: 663  EFV------DGTNGHLSKS----------FLDLPKMEQQSRLKDRLKKYCQKAYKRVLDK 706
            E           NG  SK           +  LP   Q+  LK R K YC   YK+    
Sbjct: 749  ENFPVEKKGGAANGDASKGPNRSTQPAVPYAQLPNDRQELLLKQRFKSYCSSVYKKT--- 805

Query: 707  PVTE--LREAGICMRENSFYVDTVRSFRDRRYEYKGLNKVWKGKLSEAKASGNSIKIQEA 764
             VTE   R A +CMREN FYV+TVR+FRDRRYEYKGL KVWK K+ +A  + + +   +A
Sbjct: 806  KVTEEQKRSATVCMRENPFYVNTVRAFRDRRYEYKGLTKVWKKKVGQAAEAKDLLAKIDA 865

Query: 765  QDMVVLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIG 824
            Q+  ++YDSLQLAHKCILNSFYGYVMRKGARW+SMEMAG+VT+TG+ II  AR L+E+IG
Sbjct: 866  QNKCLVYDSLQLAHKCILNSFYGYVMRKGARWHSMEMAGIVTHTGSNIITGARELVEQIG 925

Query: 825  KPLELDTDGIWCVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVD 884
            +PLELDTDGIW +LP SFPE F+FK  D   + +ISYPCVMLN DV    TN QY  L D
Sbjct: 926  RPLELDTDGIWAILPKSFPETFSFKLNDGSSR-SISYPCVMLNADVHAKFTNPQYHEL-D 983

Query: 885  PVSKTYETHSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKR 944
            P +  Y +H ECSI FEVDGPYKAM+LPAS EEG L+KKRYAVFN D +LAELKGFE+KR
Sbjct: 984  PATGKYNSHKECSILFEVDGPYKAMVLPASTEEGKLLKKRYAVFNFDHSLAELKGFELKR 1043

Query: 945  RGELKLIKVFQAELFDKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISE 1004
            RGEL+LIK FQ+++F+ FL G ++EECY++VA  ANRWLD++D +GK + D EL+  I+E
Sbjct: 1044 RGELQLIKAFQSQVFECFLDGDSLEECYASVAKCANRWLDVIDTRGKSMDDEELMALITE 1103

Query: 1005 SSTMSKSLADYGEQKSCAVTTARRLSDFLGDTMVKDKGLRCQYIVACEPQGTPVSERAVP 1064
            + +MS  L +Y  QKS ++TTARRL +FLG+ M+KD+GL C+ I+A  P G  V+ERA+P
Sbjct: 1104 NKSMSGKLDEYEGQKSTSITTARRLGEFLGEDMLKDRGLTCKMIIAARPYGEKVTERAIP 1163

Query: 1065 VAIFETDAEIMKFYLRKWCKTS--SDVGIRSIVDWSYYKQRLSSAIQKIITIPAAMQKVS 1122
             AIF T+  + K +L+KW K     D  IRSI+DW YY+ R +S +QKII++PAA Q V 
Sbjct: 1164 TAIFATEDAVKKHFLKKWLKDPHLQDFDIRSILDWDYYRTRFASTVQKIISLPAAFQNVK 1223

Query: 1123 NPVPRVVHPDWLYKKVREKEDKFRQRKLVDIFSSLKKDDFLNKTCNAETNLMDENVEDLE 1182
            NPVPR+  PDW+ ++VREK  K +Q  +   F +  K         A+       + D+E
Sbjct: 1224 NPVPRIELPDWMRRQVREKNAKHQQGNMKQFFKAAAK--------GADKGDYVAKLIDME 1275

Query: 1183 DFPKKRRNSVNGPRPIVRCFEVNNEQKTVKTTDQVDSLRQQLEPSEVSDQQPSSQNAIDT 1242
            D  K ++ S    +P+ R       ++  KT+D  DS+    E  + +     + N    
Sbjct: 1276 DLIKGKQPS-RTDKPLSR-------KRGKKTSDGDDSISPIEEIDDDAVDDVPAANVKLG 1327

Query: 1243 ENIDRIVDYKGWLELKKRKWKDNLDRRKKQKL------GSLRASHQANGVSESLGDMINH 1296
            E     V +  WL+ +K+KWK  L +R++++            ++  +G ++        
Sbjct: 1328 E-----VPFTQWLKNRKKKWKSMLGKRRREREERMRDYSGFGMANSVHGNAKRFQSGSTR 1382

Query: 1297 KEAQRRTGVG--SYFRRQETAMTRCHWQIIQLVPSSQSGVFLAWVVV--EGIMVRIPITV 1352
              A +  GVG  ++     +A+   +WQI++ +   Q G+F  WV+     ++ RI + +
Sbjct: 1383 ALAAKGNGVGMENFVFNAGSALQHEYWQIVE-IQQEQGGIFTCWVLTAHSQMLQRITLKM 1441

Query: 1353 PRLFYLNSK----DPIVEKFPG-RRVNKTLPH-GRRSFNLIEVMIDEDQFRKESKKLAAL 1406
            PR+F++  +    + ++   PG RRV++ +PH   +  +++EVM+ E Q+++  K++  +
Sbjct: 1442 PRVFHITCEEEDHESLLSLLPGSRRVSRIVPHFSSKPQSVLEVMLSERQYQQYHKEINQI 1501

Query: 1407 LADPEV 1412
            L DP V
Sbjct: 1502 LGDPHV 1507



 Score =  278 bits (711), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 189/664 (28%), Positives = 328/664 (49%), Gaps = 107/664 (16%)

Query: 1414 VLGWQQNAAKIGMQRCAASSQWFNERISLARYAHI------------------------- 1448
             L W++   +  M RC   +Q++ + +  ARYAH+                         
Sbjct: 1734 ALTWRKIMGEKMMTRCFEMTQYYADVLDCARYAHLPVGNFTGDHSIAILDTLYSRILTKH 1793

Query: 1449 ---LWISDDGVPDLGG-----------------TSEEDECFADEVHQP----VLTYPGAY 1484
                W S   +PDLGG                 ++++ +  A   H+     V+   G++
Sbjct: 1794 KHLWWHSPTSLPDLGGKEQEQQFQQLFSQSLLGSAQKQKSDATSQHRVDTSVVVCDKGSF 1853

Query: 1485 RKVSVELKIHHLSVNALLKSNQVNEMEGGGL-------FGFDQDMNSGPYNNE---LCGF 1534
              V VEL++  L+VNA+L ++Q++ +EG G+       F  + +  +G        +   
Sbjct: 1854 VDVCVELELDGLAVNAILVASQIHSIEGLGVAHQMEIEFDGNGEGEAGATEGSAPAVAEG 1913

Query: 1535 DETTSSAPAFRVVKQLIQRCLTDAVTSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILH 1594
            D   S   AFR+++ ++     D + S N FAD +LQ  YRWLCSP+S   DP LH ++ 
Sbjct: 1914 DAEESCHEAFRLLRVMVTTLFKDFLASRNKFADHVLQQFYRWLCSPNSLSFDPALHAMVK 1973

Query: 1595 KVMQKVFAMLLAEFRKLGATIIFANFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEW 1654
            ++M+K+F  LLAEFR+LG+ I++A+FSK+I+ T K  +  A+ Y + +L+ + + ELF+ 
Sbjct: 1974 RLMEKLFLQLLAEFRRLGSQIVYADFSKIIVCTKKKSVRDAQTYLNFILQTVLSNELFQV 2033

Query: 1655 IELEPVHFWHSLLFMDQYNYGGIPAR--------------ADESLDDDS---QVDIVSSW 1697
            +   P  ++ +LLF+D  NYG +  +               +E+  DD+    ++IV+ W
Sbjct: 2034 LNFTPKKYFSNLLFLDAENYGCVLLKNVVPEEEQEQEKEEEEETEHDDAGEKPLEIVAHW 2093

Query: 1698 NIAEYLPKEIQDHFVLVVSEFMYIPWKHAQKLAASRASLQEGSSCTPSITVAAAENFESH 1757
            NIA YLP+ + ++F++++ +F+    +   ++ A   + +  ++      +   E   S 
Sbjct: 2094 NIANYLPRGVDEYFLILIGQFIRRRAEFQCRMLAKGDNAKLDAADEDEQPLDEDEKQLSP 2153

Query: 1758 IVQYVKGEISSYFTGKLLSIVRDAIHHMKKMNNDQHNSPGVMQTAANIHKVDAP-LEFIK 1816
            + +Y +  +SSYF+ K+L +V + + +    N D+ + P     A +   +++P LE +K
Sbjct: 2154 LAKYSQKLVSSYFSDKMLRLVPEILTY----NMDRDSFPVF---AGSHLPLESPALELVK 2206

Query: 1817 HVCAAFALDQNVQHDVLVMRKNLLKYVRVREFAPEAEFRDPCPSFILPNVICSYCNDCRD 1876
             V A F L+ +V+  V  MR+ LLK +R  EF  E++FR+P  SF + +VIC  CN CR 
Sbjct: 2207 FVTAVFQLEPSVETQVGKMRRTLLKLLRTSEFGEESQFRNPSLSFTVQDVICLSCNLCRS 2266

Query: 1877 LDLCRDMALL--------------------AQDWHCAMPQCGQPYDREVMENALLQIVRQ 1916
            +DLCRD  L                     A  WHC  P+C   YD+   E  L+++V+ 
Sbjct: 2267 VDLCRDPQLFKGSASQTDEDDEENGDDADAAAAWHC--PRCFALYDKTAFEMRLVELVQA 2324

Query: 1917 RERLYHLQDLVCIRCNQVKAAHLAEQCACAGSFRCKEDASD-FRSKMQIFLNIANRQGFQ 1975
            +   Y LQDL C +C+      + E C C+G++       +     M++   IA +  F+
Sbjct: 2325 QSVAYQLQDLYCRKCHLPAEHKMREYCPCSGTYALIPGVRESLLETMRLLKRIAQQHTFE 2384

Query: 1976 LLQE 1979
             L E
Sbjct: 2385 WLLE 2388


>gi|307178869|gb|EFN67414.1| DNA polymerase epsilon catalytic subunit A [Camponotus floridanus]
          Length = 2245

 Score = 1311 bits (3393), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 669/1405 (47%), Positives = 935/1405 (66%), Gaps = 50/1405 (3%)

Query: 26   ELEAKLGYDLFSEGDKRLGWLLTFASSSLEDEDTRKVYSCIDLYFVSQDGSTFKSKYKFR 85
            +++A  G+   ++  +R+G+LL   ++ +  ED +++ S ID YF+ +D + FK    + 
Sbjct: 43   KIDAAYGFRRVTDSKERIGFLLNMHATEIV-EDDKRLLSGIDYYFIEEDATRFKVSLPYS 101

Query: 86   PYFYAATKEKMEMDVEAYLRRRYESQIADIEILEKEDLDLKNHLSGLHKSYLKISFDTVQ 145
            PYFY   ++   ++V  +L ++Y   +  IE   KEDLDL NHL GL + YLK+SF    
Sbjct: 102  PYFYILCRKDTFVEVSTFLSKKYMGLLTKIETTYKEDLDLANHLIGLKQKYLKLSFANTV 161

Query: 146  QLMDVKKDLLHVVERNQAKFDAAEAYESILTGKREQRPQD-------FLDCIVDLREYDV 198
             L  VK+D++ VV+ N+ +  +   Y  +L    +   QD        +D I+D+REYDV
Sbjct: 162  DLTKVKRDIMRVVKVNKEREKSKTYYTDMLATTLQSNEQDNSKQTLDHMDNILDIREYDV 221

Query: 199  PYHIRFAIDNDVRCGQWYDVSI-SSTGPLLEKRVDLLQRAEVHVCAFDIETTKLPLKFPD 257
            P+H+R +ID ++ CG WY V    S  P++ ++ D+++  E  V A+DIETTKLPLKFPD
Sbjct: 222  PHHVRVSIDVNIFCGTWYSVKTRGSEPPIITRKEDMIEPPEPIVLAYDIETTKLPLKFPD 281

Query: 258  ADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNVNNEIELLRLW 317
            A  D IMMISYM+DGQGYLI NRE +  DI + EYTPKPEFEG F V N  NE   +  +
Sbjct: 282  ASIDQIMMISYMIDGQGYLITNRELISADIRNFEYTPKPEFEGPFTVFNEPNEKATITRF 341

Query: 318  FAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDKNQGECRAKFACHLD 377
            F H+ E++P I+VTYNGD+FDWPF+E RAA H   M E++GF  ++ +G    + A H+D
Sbjct: 342  FDHIDEIRPHIFVTYNGDFFDWPFVEARAAIHNMDMKEKIGFSKNR-EGVYVNRAAMHMD 400

Query: 378  CFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQMMASYSVSDAVAT 437
            C  WV+RDSYLP GSQ LKAV KAKL YDP+E++PEDM R A E+P+++A+YSVSDAVAT
Sbjct: 401  CLCWVRRDSYLPVGSQNLKAVAKAKLRYDPVELDPEDMCRLASEEPEVLANYSVSDAVAT 460

Query: 438  YYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVICPNKHQSDPEK 497
            +YLY  Y+HPFIF+L TIIPM PDEVLRKGSGTLCE LLMV+A+KAN+I PNK +++  K
Sbjct: 461  FYLYQKYIHPFIFALCTIIPMEPDEVLRKGSGTLCESLLMVEAFKANIIFPNKQETELNK 520

Query: 498  FYRN-HLLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQLLNNLDRDLQYAIKVEG 556
              ++ HLL+ ETY+GGHVE LESGVFR+D+P  FK+ P A  +L++ ++  L++ I+ E 
Sbjct: 521  LTKDGHLLDQETYVGGHVEALESGVFRADIPCRFKIIPRAVNELISGVENALKHTIQEEE 580

Query: 557  KMDLESVSNYDEVKNAIMEKLLRLQEEPIREECPLIYHLDVAAMYPNIILTNRLQPPSIV 616
            K+ +E V+N+DE+ + +  KL  L+++P+R E P+IYHLDV AMYPNIILTNRLQP +IV
Sbjct: 581  KVSVEMVTNFDEIVDEVKGKLKELRDQPLRLENPVIYHLDVGAMYPNIILTNRLQPSAIV 640

Query: 617  TDEVCTACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYYHLKKQIESE-FVDGTNGHLSKS 675
             +  C  CD+N+P   C RK++W+WRGE       +Y  +K+Q+E+E F     G   ++
Sbjct: 641  NEMDCAVCDYNKPDALCQRKMKWMWRGEYLAASLGEYQRVKQQLETERFPPQFPGGSKRA 700

Query: 676  FLDLPKMEQQSRLKDRLKKYCQKAYKRVLDKPVTELREAGICMRENSFYVDTVRSFRDRR 735
            F +L   EQ +  K+RL +YC+KAYK+V    + E R   IC +ENSFYVDTVR+FRDRR
Sbjct: 701  FHELTTKEQATFQKNRLTEYCKKAYKKVKITRMEE-RTQTICQKENSFYVDTVRAFRDRR 759

Query: 736  YEYKGLNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHKCILNSFYGYVMRKGAR 795
            YEYK L KV K +++ A A  ++ +I+ A+   VLYDSLQLAHKCILNSFYGYVMRKGAR
Sbjct: 760  YEYKALTKVAKRQVAAAIAKEDAAEIKSAKSREVLYDSLQLAHKCILNSFYGYVMRKGAR 819

Query: 796  WYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLPGSFPENFTFKTKDLKK 855
            W+SMEM G+V YTGA II  AR +IE+IG+PLELDTDGIWC+LP SFP++    T   KK
Sbjct: 820  WHSMEMGGIVCYTGAHIIMKAREIIEQIGRPLELDTDGIWCILPASFPDSLIVHTTSEKK 879

Query: 856  -KLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEFEVDGPYKAMILPAS 914
             K TISYP  +LN  V    TN  Y  LVD  + TYE  +E SI FEVDGPY AM+LPA+
Sbjct: 880  PKFTISYPNAVLNFMVKDQFTNQVYHELVDKDNLTYEIRNENSIFFEVDGPYLAMVLPAA 939

Query: 915  KEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFLHGSTIEECYSA 974
            KEEG  +KKRYAVFN DG+LAELKGFE+KRRGEL+LIK+FQA +F+ FL G+T+EECY++
Sbjct: 940  KEEGKKLKKRYAVFNFDGSLAELKGFEVKRRGELQLIKIFQASVFESFLKGNTLEECYAS 999

Query: 975  VAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLADYGEQKSCAVTTARRLSDFLG 1034
            VA  A+ WLDLL ++  ++ DSEL + ISE+ +MS+ L +YG QKS +++TA+RL++FLG
Sbjct: 1000 VAKDADYWLDLLYSKCANMPDSELFELISENKSMSRKLEEYGAQKSTSISTAKRLAEFLG 1059

Query: 1035 DTMVKDKGLRCQYIVACEPQGTPVSERAVPVAIFETDAEIMKFYLRKWCK--TSSDVGIR 1092
            D MVKD GL C+YI+A +PQ  PV+ERA+P+AIF+++  + + YL+KW K  T     IR
Sbjct: 1060 DEMVKDAGLACRYIIANKPQSAPVTERAIPLAIFQSEPAVRRHYLKKWLKDPTLYSDDIR 1119

Query: 1093 SIVDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLYKKVREKEDKFRQRKLVD 1152
             I+DW+YY +RL SAIQKIITIPAAMQ ++NPVPRV HP WL+KKV EK    RQ+K+ D
Sbjct: 1120 DILDWNYYIERLGSAIQKIITIPAAMQGLANPVPRVQHPPWLHKKVTEKNTSHRQKKITD 1179

Query: 1153 IFSSLKKDDFLNKTCNAETNLMDENVEDLEDFPKKRRNSVNGPRPIVRCFEVNNEQKTVK 1212
            IF+   K D L +T N+          D+ED  +   +  N P  +V      N++K   
Sbjct: 1180 IFTVTAKTDALQQTANS------IEPRDIEDLARPSTSFKNSPVSVV------NKRKRQH 1227

Query: 1213 TTDQVDSLRQQLEPSEVSDQQP-SSQNAIDTENIDRIVDYKGWLELKKRKWKDNLDRRKK 1271
              D  +++R +     +    P  +     TE          WLE  K+KW     +R +
Sbjct: 1228 AEDD-EAVRAKSWKEALGSPPPRGTTREGRTE----------WLEFHKKKWAFQAKQRHQ 1276

Query: 1272 QKLGSLRASHQANGVSESLGDMINHKEAQRRTGVGSYFRRQETAMTRCHWQIIQLVPSSQ 1331
             +    + + + +G++  +   I +      TG   + RR +  +    WQI+QL  + +
Sbjct: 1277 HRQKRSK-TDENDGITWGV---IRNTNTSTMTG---FLRRAQRKLLETPWQIVQLTETGE 1329

Query: 1332 SGVFLAWVVVEGIMVRIPITVPRLFYLNSKDPIVEKFPG---RRVNKTLPHGRRSFNLIE 1388
             G+F  W++++  + ++ + VPR+FY+N++    +  P    ++  K+LP  R  +NL  
Sbjct: 1330 PGMFRLWILLDTQLHQVRLVVPRIFYVNTRKARPDPGPNELWKKSFKSLPRSRPVYNLYR 1389

Query: 1389 VMIDEDQFRKESKKLAALLADPEVE 1413
              + E  F++ S++L   L+ PE+E
Sbjct: 1390 YSLPESLFQEHSRELLEDLSKPEIE 1414



 Score =  288 bits (738), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 181/603 (30%), Positives = 296/603 (49%), Gaps = 41/603 (6%)

Query: 1412 VEVLGWQQNAAKIGMQRCAASSQWFNERISLARYAH----ILWISDDGVPDLGGTSEEDE 1467
            VE++  Q       +    A    F   +  AR+ H    +LW S    PDLGG+  +D 
Sbjct: 1639 VELMAEQCRFFHAPIGNIPADPTLFGADLFYARHLHRNNFVLWCSPTEKPDLGGSENDDN 1698

Query: 1468 CFA---DEVHQPVLTYPGAYRKVSVELKIHHLSVNALLKSNQVNEMEGGGLF-GFD---- 1519
                  +E        PG Y  V V+L +  L+VNALL+ + +++++G   F  F     
Sbjct: 1699 RLLTDFEESSSCAANNPGTYSSVCVQLDVESLAVNALLQYHHIHDIDGTSTFVAFHNQQR 1758

Query: 1520 ---QDMNSGPYNNELCGFDETTSSAPAFRVVKQLIQRCLTDAVTSGNVFADAILQHLYRW 1576
               QDM +G     +  +DE T   PAF+ ++ ++   L +     NVFAD  L H YRW
Sbjct: 1759 PSVQDMATGDAAAIIPSYDEITLCNPAFKTLRSMVNAWLIEVSVYKNVFADYQLIHFYRW 1818

Query: 1577 LCSPHSKLHDPVLHRILHKVMQKVFAMLLAEFRKLGATIIFANFSKVIIDTGKFDLSAAK 1636
            L S ++ L+DP L R LH  M+K++  L+AEF+ LG  I+FANF+K+I+ T K  ++ A 
Sbjct: 1819 LRSSNALLYDPALRRTLHTYMKKLYIQLIAEFKTLGCIIVFANFNKIIVCTKKRSVADAL 1878

Query: 1637 AYCDSLLKALQTRELFEWIELEPVHFWHSLLFMDQYNYGGIPA-------RADESL--DD 1687
             Y + +++ ++ +ELF  IE+     W  L+++D +N+ G+         R DES   DD
Sbjct: 1879 GYMEFVVQTIRNKELFHSIEITYDQCWEYLIWLDLHNHAGVKGQLSKDDTRDDESTENDD 1938

Query: 1688 DSQVDIVSSWNIAEYLPKE--IQDHFVLVVSEFMYIPWK-----HAQKLAASRASLQEGS 1740
            D    IV SW++ E LPKE   Q  F  V++ ++ + ++          A  R    +  
Sbjct: 1939 DDTPQIVMSWSLMECLPKESGCQASFNAVIAGYINMIYRCMIENETNNTARPRRRGSQSQ 1998

Query: 1741 SCTPSITVAAAENFESHIVQYVKGEISSYFTGKLLSIVRDAIHHMKKMNNDQHNSPGVMQ 1800
            S    + + A EN      +Y K  IS   + KL  I +    ++ +        P +  
Sbjct: 1999 SFIAPLGLGALEN----TAEYAKKLISGEMSQKLFKITQKIHRNLPEKTLTLEEYPNLDM 2054

Query: 1801 TAANIHKVDAPLEFIKHVCAAFALDQNVQHDVLVMRKNLLKYVRVREFAPEAEFRDPCPS 1860
                  K++  LE IK VC   +LD+ V+H+V  ++ NLL+ + V   +   E+++PC S
Sbjct: 2055 NGKESTKINPALELIKAVCKILSLDKEVEHEVYNLKTNLLRLIGVGSHSDNVEWKEPCIS 2114

Query: 1861 FILPNVICSYCNDCRDLDLCRDMALLAQD----WHCAMPQCGQPYDREVMENALLQIVRQ 1916
             +LP +IC  CN  RD+DLCRD     ++    W C  P C   YD   +E  L+  + +
Sbjct: 2115 LVLPEIICKACNHTRDVDLCRDQQYTIENNRHMWKC--PICDTSYDNTEIEFLLIDKLNR 2172

Query: 1917 RERLYHLQDLVCIRCNQVKAAHLAEQCACAGSFRCKEDASDFRSKMQIFLNIANRQGFQL 1976
            +   Y LQDL C +C ++K  ++   C+C+G +       + +  + I  ++A++    +
Sbjct: 2173 KSMGYVLQDLQCRKCKEIKRENMNILCSCSGEYDNLIAQDEVKMLVNICKSVASKCKMNI 2232

Query: 1977 LQE 1979
            L E
Sbjct: 2233 LAE 2235


>gi|408396418|gb|EKJ75576.1| hypothetical protein FPSE_04219 [Fusarium pseudograminearum CS3096]
          Length = 2211

 Score = 1311 bits (3392), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 675/1418 (47%), Positives = 931/1418 (65%), Gaps = 82/1418 (5%)

Query: 27   LEAKLGYDLFSEGDKRLGWLLTFASSSLEDEDTRKVYSCIDLYFVSQDGSTFKSKYKFRP 86
            ++  +G+  +  G KR GWL+    +++ED+ T    + +D YF+ +DGSTFK+  +F P
Sbjct: 53   IDENMGFARYESGKKREGWLVNIQPTAIEDDKTPGGRAAVDCYFIEEDGSTFKATVEFEP 112

Query: 87   YFYAATKEKMEMDVEAYLRR-RYESQIADIEILEKEDLDLKNHLSGLHKSYLKISFDTVQ 145
            YF  A K+  E +VE + +R   +  +  I  +EK+DL++ NHL G  +++L++ F  V 
Sbjct: 113  YFLIAVKKGREAEVEEWAKRVPGDGVVKSIRRVEKDDLNMPNHLLGYRRTFLELKFTNVN 172

Query: 146  QLMDVKKDLLHVVERNQAKFDAAEAYESILT----------------GKREQRPQDFLDC 189
             LM  ++D++ + E+N+   +A +AY  + T                        D  D 
Sbjct: 173  DLMAARRDIMPIAEKNKKNMNAMDAYAEVATHGNGGFDLFDDSRDDDRNTNNAHADASDF 232

Query: 190  IVDLREYDVPYHIRFAIDNDVRCGQWYDV----SISSTGPLLEKRVDLLQRAEVHVCAFD 245
            IVD+REYDVPYH+R  ID D+R G WY V     ++   P  E+ +     A+  V A+D
Sbjct: 233  IVDIREYDVPYHVRVMIDLDIRAGTWYFVEAKHGVTKIYPNEERSLP----ADPVVMAYD 288

Query: 246  IETTKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVT 305
            IET+K PLKFPDA  D I+MISYM+DGQG+LI NR+ + EDI D +YTPKPE+ G F + 
Sbjct: 289  IETSKQPLKFPDAASDQIIMISYMIDGQGFLITNRQILSEDIGDFDYTPKPEYPGPFMIF 348

Query: 306  NVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDKNQ 365
            N  +E  L+  +F H++E +P +  TYNGD+FDWPF+E RA+ +G  M +E+G++ D N+
Sbjct: 349  NEPDEKSLIERFFLHIKEARPTVIATYNGDFFDWPFVEARASINGIDMYQEIGWKKD-NE 407

Query: 366  GECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQM 425
             + +  ++ H+DCF WV RDSYLPQGS+GLKAVT AKLGYDP E++PE M  +A E+PQ 
Sbjct: 408  DQYKCAYSVHMDCFHWVNRDSYLPQGSRGLKAVTVAKLGYDPDELDPELMTPYATERPQT 467

Query: 426  MASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANV 485
            +A YSVSDAVATYYLYM YVHPFIFSL TI+P+S DEVLRKG+GTLCEMLLMVQAY+  +
Sbjct: 468  LAEYSVSDAVATYYLYMKYVHPFIFSLCTILPLSGDEVLRKGTGTLCEMLLMVQAYQREI 527

Query: 486  ICPNKHQSDPEKFYRNHLLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQLLNNLD 545
            + PNK+ +  E F+  HLL+SETY+GGHVE +E+GVFR+D+P  F +DP A ++LL +LD
Sbjct: 528  VLPNKYITPKEAFWDGHLLDSETYVGGHVESIEAGVFRADIPVDFAVDPGAIDELLTDLD 587

Query: 546  RDLQYAIKVEGKMDLESVSNYDEVKNAIMEKLLRLQEEPIREECPLIYHLDVAAMYPNII 605
              L++ + VE +   E V NY+EVK  I+E+L +L+E P R E PLIYHLDVA+MYPNI+
Sbjct: 588  AALKFVVTVEEQKKFEDVENYEEVKAQIVERLNKLKETPNRHEKPLIYHLDVASMYPNIM 647

Query: 606  LTNRLQPPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYYHLKKQIESEFV 665
             TNRLQP S++ +  C ACDFNRPGKTC R++ W WRGE    KR +Y  ++  +E+E  
Sbjct: 648  TTNRLQPDSMIQESDCAACDFNRPGKTCDRRMPWAWRGEYVPAKRDEYNMIRHALENEKF 707

Query: 666  DGT-NGHLSKSFLDLPKMEQQSRLKDRLKKYCQKAYKRVLDKPVTELREAGICMRENSFY 724
             G       + F DL   EQ + ++ RL+ Y QK Y ++ D   T +REA IC REN FY
Sbjct: 708  PGKFPSSPMRPFQDLSADEQAALVRKRLQLYSQKVYHKIHDS-TTIVREAIICQRENPFY 766

Query: 725  VDTVRSFRDRRYEYKGLNKVWKGKLSEAKASGN-SIKIQEAQDMVVLYDSLQLAHKCILN 783
            ++TVR FRDRRY+YKG  KVWKGK S  +++G    ++  A+ M++LYDSLQLAHK ILN
Sbjct: 767  INTVRDFRDRRYDYKGKAKVWKGKTSTLQSAGAPQNEVDAAKKMIILYDSLQLAHKVILN 826

Query: 784  SFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLPGSFP 843
            SFYGYVMRKG+RWYS++MAGV   TGA IIQ AR L+E++G+PLELDTDGIWC+LP +FP
Sbjct: 827  SFYGYVMRKGSRWYSLDMAGVTCLTGAHIIQMARQLVERLGRPLELDTDGIWCMLPATFP 886

Query: 844  ENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEFEVD 903
            ENF+FK K   KKL ISYPCVMLN  V    TN QYQTLVD  +  YETHS+ SI FEVD
Sbjct: 887  ENFSFKLKG-GKKLNISYPCVMLNHLVHAKFTNHQYQTLVDQKTLKYETHSDNSIFFEVD 945

Query: 904  GPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFL 963
            GPYKAM+LP SKEE   +KKRYAVFNDDG+LAELKGFE+KRRGELKLIK+FQ ++F  FL
Sbjct: 946  GPYKAMVLPTSKEEDKNLKKRYAVFNDDGSLAELKGFEVKRRGELKLIKIFQQQIFKFFL 1005

Query: 964  HGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLADYGEQKSCAV 1023
             G T+ +CY AVA VANRWLD+L ++G  +AD EL++ ISE+ +MSK+L +YG QKS ++
Sbjct: 1006 EGETLADCYGAVAKVANRWLDVLHSKGTTLADEELMELISENRSMSKTLEEYGNQKSTSI 1065

Query: 1024 TTARRLSDFLGDTMVKDKGLRCQYIVACEPQGTPVSERAVPVAIFETDAEIMKFYLRKWC 1083
            TTA+RL+DFLG+ MVKDKGL C++I+   P+  PV+ERA+PVAIF  +  + + YL+KW 
Sbjct: 1066 TTAKRLADFLGEQMVKDKGLNCKFIICARPKNAPVTERAIPVAIFSAEESVKRTYLKKWL 1125

Query: 1084 KTS-SDVGIRSIVDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLYKKVREKE 1142
            K   +D   R+++DW YY +RL S IQK+ITIPAA+QKV NPVPRV HPDWL +++  K+
Sbjct: 1126 KEEPTDTDPRALLDWDYYLERLGSVIQKLITIPAALQKVRNPVPRVPHPDWLQRRINIKD 1185

Query: 1143 DKFRQRKLVDIFSSLKKDDFLNKTCNAETNLMDENVEDLEDFPKKRRNSVNGPRPIVRCF 1202
            DK +Q+KL DIF     +D         T L    ++D+EDF  K          +++  
Sbjct: 1186 DKLKQKKLTDIFKKSPLEDI--------TGLKGAGMDDVEDFGSK----------LLKPK 1227

Query: 1203 EVNNEQKTVKTTDQVDSLRQQLEPSEVSDQQPSSQNAIDTENIDRIVDYKGWLELKKRKW 1262
            +V      +  + Q  +++++  P  V +  P S  A+         +Y+ +L  +K+KW
Sbjct: 1228 QVG----AIIASSQAATVQKRKSPEPVENPDPMS--ALPEVMPSASENYEEFLMYQKQKW 1281

Query: 1263 KDNLDR--RKKQKLGSLRASHQANGVSESLGDMINHKEAQRRTGVGSYFRRQETAMTRCH 1320
            K   +   R++Q  G  R            G  +N+        +   F +Q       +
Sbjct: 1282 KIQKEARIRRRQLFGDRR------------GGAVNN--------LQQTFMKQAHTTYMSN 1321

Query: 1321 WQIIQLVPSSQSGVFLAWVVVEGIMVRIPITVPRLFYLNSK-----DPIVEKFPGRRVNK 1375
            WQ++ L  +   G+ +A+V+++  +  + + VPR  +LN K     D  V+     +VN 
Sbjct: 1322 WQVLHLKTTETPGIVMAYVLIDAKIHTLKVNVPRQVFLNLKSKDLPDVEVDGCEVEQVNY 1381

Query: 1376 TLPHGRRSFNLIEVMIDEDQFRKESKKLAALLADPEVE 1413
            TLP+G  S +L ++ + ED +  ES K + L   P VE
Sbjct: 1382 TLPNGHPSSHLFKLTVSEDIYFNESGKFSLLFNHPSVE 1419



 Score =  259 bits (662), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 171/617 (27%), Positives = 290/617 (47%), Gaps = 69/617 (11%)

Query: 1407 LADPEVEVLGWQQNAAKIGMQRCAASSQWFNERISLARYAHI------------------ 1448
            +AD  +  LGW    AK  +        W     +LARY  +                  
Sbjct: 1615 IADSSLPPLGWLSVIAKRLVGHYLGLGSWILHLTALARYGDVPLCNLERDDPRFLIDIAY 1674

Query: 1449 ----------LWISDDGVPDLGGTSEEDECFA-DEVHQPVLTYPGAYRKVSVELKIHHLS 1497
                      LW S D  PD  G  ++D     D V  P +  PG +  V ++L + +L+
Sbjct: 1675 ARRLQSNGVVLWWSPDARPDHAGYEKDDLLGPLDTVKMPNINNPGTFSSVCIDLDVRNLA 1734

Query: 1498 VNALLKSNQVNEMEGGGLFGFDQDMNSGPYNNELCGFDETTSSAPAFR-----VVKQLIQ 1552
            +N +L S+ +NE+EG     F          N      ET +S  AF      V++++++
Sbjct: 1735 INTILTSSLINELEGADSVSF----------NPAADDSETLTSENAFANAGVLVLREMVK 1784

Query: 1553 RCLTDAVTSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEFRKLG 1612
               T+A   G+  AD ++QHL RW+ +P S ++D  LH  +  + +K F  L+A+FR++G
Sbjct: 1785 AWWTEAC-RGSTMADVLVQHLVRWVENPDSFMYDRALHYYVQMMSRKAFQQLMADFRRVG 1843

Query: 1613 ATIIFANFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLFMDQY 1672
            + +IFAN +++I+ T K ++  A AY   ++K+++++ LF +I+LE   +W  L++ D++
Sbjct: 1844 SQVIFANANRLILQTTKAEVGNAYAYSQYIIKSIKSKPLFHFIDLEIKEYWDYLVWYDEF 1903

Query: 1673 NYGGIPARADESLDDDSQ-VDIVSSWNIAEYLPKEIQDHFVLVVSEFMYIPWKHAQKLAA 1731
            NYGG      E ++ + Q ++ + +W IA +LP  +Q  F   V EF+       Q +  
Sbjct: 1904 NYGG--KACQEVVEAEEQTLETIMNWQIATFLPVRLQSTFHDWVIEFI-------QLMHQ 1954

Query: 1732 SRASLQEGSSCTPSITVAAAENFESHIVQYVKGE-----ISSYFTGKLLSIVRDAIHHMK 1786
             +         TP +T   ++  E H  Q + G+     +     G L    R+ +H   
Sbjct: 1955 LKRPHNGDPDATPRLTQLPSKGLEEHEGQIILGKAFEKPLKKDIIGLLNRQKRELLH--P 2012

Query: 1787 KMNNDQHNSPGVMQTAANIHKVDAPLEFIKHVCAAFALDQNVQHDVLVMRKNLLKYVRVR 1846
            ++  D +  P +  +  N+   ++ LE +K +    +LD+N+  +  ++RK LL    +R
Sbjct: 2013 ELAGD-YTFPSLPGSHLNLR--NSILELVKSLMQILSLDKNITLEARLLRKELLALFEIR 2069

Query: 1847 EFAPEAEFRDPCPSFILPNVICSYCNDCRDLDLCRDMALLAQD--WHCAMPQCGQPYDRE 1904
            EF+ E  F +P  S  LP V C  C   RDLDLCRD  L  +   W C    CG  +DR 
Sbjct: 2070 EFSKEGTFANPSESLRLPQVSCDSCTMMRDLDLCRDEDLFGEGAAWCCGF--CGTEFDRV 2127

Query: 1905 VMENALLQIVRQRERLYHLQDLVCIRCNQVKAAHLAEQCACAGSFRCKEDASDFRSKMQI 1964
             +E  LL IV      +  QDL C+RC  ++     E C C+G ++      D   ++ +
Sbjct: 2128 AIEERLLGIVESWVVEWTTQDLKCVRCGALRTNDFMEHCTCSGEWKEVVSRQDVSKRLGV 2187

Query: 1965 FLNIANRQGFQLLQECT 1981
               +A   G ++L +  
Sbjct: 2188 MKRVAKFYGLRMLSDVV 2204


>gi|366986501|ref|XP_003673017.1| hypothetical protein NCAS_0A00660 [Naumovozyma castellii CBS 4309]
 gi|342298880|emb|CCC66626.1| hypothetical protein NCAS_0A00660 [Naumovozyma castellii CBS 4309]
          Length = 2223

 Score = 1310 bits (3391), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 677/1412 (47%), Positives = 914/1412 (64%), Gaps = 91/1412 (6%)

Query: 42   RLGWLL------------TFASSSLEDEDTRKVYSCIDLYFVSQDGSTFKSKYKFRPYFY 89
            R+GWLL            T  ++   D +     + +D YF+ ++G +FKS   + PYF+
Sbjct: 73   RVGWLLNMHPTIISQEIMTGTTNGKSDGNLSGGIAGVDYYFLDEEGGSFKSTITYDPYFF 132

Query: 90   -AATKEKMEMDVEAYLRRRYESQIADIEILEKEDLDLKNHLSGLHKSYLKISFDTVQQLM 148
             +   + M  DVE ++++  E+ +    I+ K+DL + NHL GL K+ +K+ F    QL 
Sbjct: 133  ISCIDDSMINDVEEFIKKYLENCLKSCSIIMKDDLKMDNHLLGLKKTLIKLEFVNSNQLF 192

Query: 149  DVKKDLLHVVERNQAKFDAAEAYESILTGKR----EQRPQ--DFLDCIVDLREYDVPYHI 202
            + +K L  ++  N+        Y+   T       E  P   D    I D+REYDVPYH+
Sbjct: 193  EARKLLKPILTDNENNKIQRNVYDKNRTNNNNNNNESTPSVADAKQFIEDIREYDVPYHV 252

Query: 203  RFAIDNDVRCGQWYDVSISSTGPLLEKRVDLLQRAEVHVCAFDIETTKLPLKFPDADYDI 262
            R +ID D+R G+WY V+       +EK    +  A+  V AFDIETTK PLKFPD+  D 
Sbjct: 253  RVSIDKDIRIGKWYKVTAGGFFEYVEK----VAFADPVVLAFDIETTKAPLKFPDSAVDQ 308

Query: 263  IMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNVNNEIELLRLWFAHMQ 322
            +MMISYM+DG+G+LI NRE + EDIED EYTP+PE+EG F + N  +E  LL  +F H++
Sbjct: 309  VMMISYMIDGEGFLITNREIISEDIEDFEYTPRPEYEGQFTIFNEVDEKALLERFFEHIR 368

Query: 323  EVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDKNQGECRAKFACHLDCFAWV 382
            EV+P +  T+NGD+FDWPF+ETRA  HG  M +E+GF  D  +GE ++ + CH+DC+ WV
Sbjct: 369  EVRPTVISTFNGDFFDWPFVETRAKIHGLDMFDEIGFAPDA-EGEYKSSYCCHMDCYRWV 427

Query: 383  KRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQMMASYSVSDAVATYYLYM 442
            KRDSYLPQGSQGLKAVT+AKLGY+P+E++PE M  +A EKPQ ++ YSVSDAVATYYLYM
Sbjct: 428  KRDSYLPQGSQGLKAVTQAKLGYNPIELDPELMTPYAYEKPQHLSEYSVSDAVATYYLYM 487

Query: 443  TYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVICPNKHQSDPEKFYRNH 502
             YVHPFIFSL TIIP++PDE LRKG+GTLCEMLLMVQAYK  ++ PNKH    E+FY  H
Sbjct: 488  KYVHPFIFSLCTIIPLNPDETLRKGTGTLCEMLLMVQAYKGRILLPNKHTDPIERFYDGH 547

Query: 503  LLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQLLNNLDRDLQYAIKVEGKMDLES 562
            LLESETY+GGHVE LE+GVFRSD+ + FK+DP+  ++LL +L   L++ I+ E K + + 
Sbjct: 548  LLESETYVGGHVESLEAGVFRSDINSKFKVDPTVIDELLEDLPYALKFCIETENKANFDD 607

Query: 563  VSNYDEVKNAIMEKLLRLQEEPIREECPLIYHLDVAAMYPNIILTNRLQPPSIVTDEVCT 622
            V+N+D++K+ I EKLL L+  P R+E PLIYH+DVA+MYPNI+ TNRLQP SI T+  C 
Sbjct: 608  VTNFDDIKDQITEKLLDLKNNPKRDEKPLIYHVDVASMYPNIMTTNRLQPDSIKTERDCA 667

Query: 623  ACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYYHLKKQIESEFVDGTNGHLSKSFL---DL 679
            +CDFNRPGKTC RKL+W WRGE +  K  +Y  +K+ +++E     N    K FL   +L
Sbjct: 668  SCDFNRPGKTCARKLKWAWRGEFYPAKMDEYNMIKRALQNETFPNKNKFSKKEFLTFDEL 727

Query: 680  PKMEQQSRLKDRLKKYCQKAYKRVLDKPVTELREAGICMRENSFYVDTVRSFRDRRYEYK 739
               +Q + +K RL +Y +K Y RV    + E REA +C REN FYVDTVR FRDRRYE+K
Sbjct: 728  SYTDQVAHIKKRLTEYSRKVYHRVKVSEIVE-REAIVCQRENPFYVDTVRGFRDRRYEFK 786

Query: 740  GLNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHKCILNSFYGYVMRKGARWYSM 799
            GL K WK K+     S    K  EA  MVVLYDSLQLAHK ILNSFYGYVMRKG+RWYSM
Sbjct: 787  GLAKTWKAKMKNIDPSDKHAK-DEANKMVVLYDSLQLAHKVILNSFYGYVMRKGSRWYSM 845

Query: 800  EMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLPGSFPENFTFKTKDLKKKLTI 859
            EMAG+   TGA IIQ AR ++E++G+PLELDTDGIWC++P SFP+ + F+  +  KKL +
Sbjct: 846  EMAGITCLTGATIIQMARSVVERVGRPLELDTDGIWCIIPSSFPDTYFFELSN-GKKLFL 904

Query: 860  SYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEFEVDGPYKAMILPASKEEGI 919
            SYPC MLN  V +  TN QYQTLVDPV   YETHSE SI FEVDGPY+AM+LP SKEEG 
Sbjct: 905  SYPCSMLNYRVHQQFTNHQYQTLVDPVKHRYETHSENSIFFEVDGPYRAMVLPTSKEEGK 964

Query: 920  LIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFLHGSTIEECYSAVAAVA 979
             IKKRYAVFN+DGTLAELKGFE+KRRGEL+LIK FQ+++F  FL G++++ECY +VA VA
Sbjct: 965  GIKKRYAVFNNDGTLAELKGFELKRRGELQLIKNFQSDIFKVFLEGTSLDECYGSVANVA 1024

Query: 980  NRWLDLLDNQGKDIADSELIDYISESSTMSKSLADYGEQKSCAVTTARRLSDFLGDTMVK 1039
            NRWLD+LD +G  + D +LI  I E+ +MSK+L +Y  QKS ++TTA+RL DFLG+ MVK
Sbjct: 1025 NRWLDVLDTKGSMLEDEDLIALICENRSMSKTLKEYEGQKSTSITTAKRLGDFLGEDMVK 1084

Query: 1040 DKGLRCQYIVACEPQGTPVSERAVPVAIFETDAEIMKFYLRKWC--KTSSDVGIRSIVDW 1097
            DKGL+C+YI++ +P   PV+ERA+PVAIF TD  I + +LR+W    T  D  IR+I+DW
Sbjct: 1085 DKGLQCKYIISTKPYNAPVTERAIPVAIFSTDISIKRLFLRRWTLDPTLEDFDIRTIIDW 1144

Query: 1098 SYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLYKKVREKEDKFRQRKLVDIFSSL 1157
            +YY++RL+S IQKIITIPAA+Q V+NPVPRV HPDWL KK+  ++DKF+Q  L   FS  
Sbjct: 1145 NYYRERLASTIQKIITIPAALQDVANPVPRVEHPDWLKKKIAIRDDKFKQTSLNRFFSK- 1203

Query: 1158 KKDDFLNKTCNAETNLMDENVEDLEDFPKKRRNSVNGPRPIVRCFEVNNEQKTVKTTDQV 1217
                       AE      +++D+ED    + ++      I R            T+ Q 
Sbjct: 1204 -----------AEAAPKFGHIKDIEDLFTNQEDNEGENLKIART-----------TSRQT 1241

Query: 1218 DSLRQQLEPSEVSDQQPSSQNA--IDTENIDRIVDYKGWLELKKRKWK-DNLDRRKKQKL 1274
                +        DQ+ + +++  + TE      DY  WL  +K KWK    DR+++ +L
Sbjct: 1242 KGKGKG---KRRRDQKAAEEHSLVLPTEKPSMEDDYAAWLNYEKIKWKIQARDRKRRTQL 1298

Query: 1275 GSLRASHQANGVSESLGDMINHKEAQRRTGVGSYFRRQETAMTRCHWQIIQLVPSSQSGV 1334
                                N+  +  R+  G+  R+Q        W+IIQ   S Q G+
Sbjct: 1299 FG------------------NNSTSTERSAFGNMIRKQAETYANSTWEIIQYKDSGQPGI 1340

Query: 1335 FLAWVVVEGIMVRIPITVPRLFYLNSKD---PI--VEKFPGRRVNKTLPHGRR-----SF 1384
               +  ++G +  I I VP++ Y+  K    P+  ++     + N  LP+  +     + 
Sbjct: 1341 LEVYASIDGRIQTINIKVPKVIYMKFKTDTLPVGKIKHCKIEKSNSVLPNIAKLNDANTN 1400

Query: 1385 NLIEVMIDEDQFRKESKKLAALLADPEVEVLG 1416
            NL ++ + E  + +E + + ++  D  V VLG
Sbjct: 1401 NLFKLTLPESTYLEEMEDIGSIFND--VNVLG 1430



 Score =  203 bits (517), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 151/620 (24%), Positives = 278/620 (44%), Gaps = 78/620 (12%)

Query: 1407 LADPEVEVLGWQQNAAKIGMQRCAASSQWFNERISLARYAHI------------------ 1448
            LA P+   L WQ    K  +    +   W +  I+L++Y++I                  
Sbjct: 1625 LALPQ---LNWQGVLIKKIVNHLLSCGSWVSHLITLSQYSNIPIGNLNLDNMSYVIDMIY 1681

Query: 1449 ----------LWISDD-GVPDLGGTSEEDEC----FADEVHQPVLTYPGAYRKVSVELKI 1493
                      LW +++  +PD GG   + +       +++  P L  P  Y    +E++I
Sbjct: 1682 VRRLKNEGIVLWWNENIPLPDHGGVQNDFDLNTSDMMNDLSFPELNQPNIYDNAVLEIEI 1741

Query: 1494 HHLSVNALLKSNQVNEMEG-----GGLFGFDQDMNSGPYNNELCGFDETTSSAPAFRVVK 1548
             +L+VN +L S  +NE EG      G  GFD + NS         F E   S  A  V++
Sbjct: 1742 GNLTVNTVLGSTLINEAEGSDLANNGSSGFDDNKNSN-------AFVEDAFSGAALSVLR 1794

Query: 1549 QLIQRCLTDAVTSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEF 1608
             +++     A+   N  AD ++     W  +P SKL D  L   +  + +K    L+ EF
Sbjct: 1795 NMLKEWWDQALKE-NSTADLLVNSFVNWSQNPTSKLFDGSLRYHIQNLTKKSLLQLMNEF 1853

Query: 1609 RKLGATIIFANFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLF 1668
              LG+ +I+A+ +K+++ T KF      AY + ++KA++T  +F +++L  V +W  L++
Sbjct: 1854 NTLGSNVIYADRNKLLVKTTKFSPENCYAYSNYMIKAIRTTPMFSYLDLNIVRYWDILIW 1913

Query: 1669 MDQYNYGGIPARADESLDDDSQVDIVSSWNIAEYLPKEIQ---DHFVLVVSEFMYIPWKH 1725
            M++YN+ GI     E   D   +   S W I ++LP   Q   D +++++ + M    +H
Sbjct: 1914 MNKYNFSGIACLEIEE-KDKQDLHAYSHWQIKKFLPPIFQPEFDDWMMIILDSMVKTKEH 1972

Query: 1726 AQKLAASRASLQEGSSCTPSITVAAAENFESHIVQYVKGEISSYFTGKLLSIVRDAIHHM 1785
              ++       Q  +   P       ++ ES +  +     + +F   LL  V+    + 
Sbjct: 1973 YLEV---NTGTQRATQLLPIKARDQKDDDESSLSTF-----TEHFARPLLKRVKKLFKNQ 2024

Query: 1786 KKMNNDQHNS--------PGVMQTAANIHKVDAPLEFIKHVCAAFALDQNVQHDVLVMRK 1837
            ++   D H +        PG      N       LE +K +C    L +    +V  +RK
Sbjct: 2025 QEFILDPHYAADYEFPILPGSYLMMKN-----PLLELVKSLCHVMLLSKKTTIEVRELRK 2079

Query: 1838 NLLKYVRVREFAPEAEFRDPCPSFILPNVICSYCNDCRDLDLCRDMALLAQDWHCAMPQC 1897
             LL    ++EFA  +EF+DP  S  +   +C YC+   DLD C+     A  ++C   +C
Sbjct: 2080 ELLTIFDIKEFAKISEFKDPSSSLDITGFLCEYCSHFSDLDFCKSDP--ATIFNCE--KC 2135

Query: 1898 GQPYDREVMENALLQIVRQRERLYHLQDLVCIRCNQVKAAHLAEQCACAGSFRCKEDASD 1957
             + +++ +++  L+Q +      Y  QDL C +CN++K  +++  C C+GS++       
Sbjct: 2136 HKEFNKLLLQEHLVQKLYGEIESYLTQDLCCSKCNKIKQDYMSTHCQCSGSWKGSISQDS 2195

Query: 1958 FRSKMQIFLNIANRQGFQLL 1977
                ++++  +A    F++L
Sbjct: 2196 VTKMIEVYKQVAGYYEFEVL 2215


>gi|312383312|gb|EFR28451.1| hypothetical protein AND_03591 [Anopheles darlingi]
          Length = 2234

 Score = 1310 bits (3390), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 676/1459 (46%), Positives = 949/1459 (65%), Gaps = 85/1459 (5%)

Query: 7    DRQDGRRTKKQKLIRSAE-EELEAKLGYDLFSEGDKRLGWLLTFASSSLEDEDTRKVYSC 65
            +R +G  T +    +S E ++++ K G++   +  +R G+L+   S+ + ++D R++ + 
Sbjct: 12   ERAEGDDTNEIGYRQSRENDQIDLKYGFERVKDTQERTGYLINMHSTEILNDD-RRLVAA 70

Query: 66   IDLYFVSQDGSTFKSKYKFRPYFYAATKEKMEMDVEAYLRRRYESQIADIEILEKEDLDL 125
            +D+YF+  DGS +K+   + PY    T+E   ++V  +L ++Y  Q+ ++E +++EDLDL
Sbjct: 71   LDMYFLQMDGSRYKTTVIYAPYLLLITREGHALEVAKFLGKKYSGQLLNVEHIQREDLDL 130

Query: 126  KNHLSGLHKSYLKISFDTVQQLMDVKKDLLHVVERNQAKFDAAEAYESIL---------- 175
             NHLSGL ++ LK++F    Q+  VK+DL   V++N+ +  A   Y  +L          
Sbjct: 131  ANHLSGLKQNLLKLTFPNTTQMNKVKRDLNIAVKKNREREKANTYYMQMLSNSLSTAIRW 190

Query: 176  ----TGKREQRPQ---DFLDCIVDLREYDVPYHIRFAIDNDVRCGQWYDV-----SISST 223
                TG+  + P    DF D IVD+RE+DVPYH+R +ID ++ CG WY V     + S  
Sbjct: 191  EEDETGREGRAPNQNVDFYDYIVDMREHDVPYHVRVSIDLNIFCGTWYTVRCRGGASSEE 250

Query: 224  GPLLEKRVDLLQRAEVHVCAFDIETTKLPLKFPDADYDIIMMISYMLDGQGYLIINRECV 283
             P++  R D++ R E  V AFDIETTKLPLKFPDA  D IMMISYM+DGQGYLI NRE +
Sbjct: 251  RPIITPRPDIIDRPEPVVLAFDIETTKLPLKFPDAQTDQIMMISYMIDGQGYLITNREII 310

Query: 284  GEDIEDLEYTPKPEFEGYFKVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLE 343
              D++D EYTPKPEFEG F V N  NE+ LL+ +F H+ +VKP I+VTYNGD+FDWPF+E
Sbjct: 311  SNDVDDFEYTPKPEFEGNFIVFNEPNELGLLQKFFDHILDVKPHIFVTYNGDFFDWPFVE 370

Query: 344  TRAAHHGFKMSEELGF-QCDKNQGECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAK 402
             RAA +   M  E+GF + +   G    + A HLDC  WVKRDSYLP GS GLKAV K+K
Sbjct: 371  ARAAVYELDMRREIGFSKVNARDGNYLCRPAMHLDCLCWVKRDSYLPVGSHGLKAVAKSK 430

Query: 403  LGYDPLEVNPEDMVRFAKEKPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDE 462
            L YDP+E++PE+M + A E+PQ++A+YSVSDAVATYYLYM YVHPFIF+LATIIP+ PDE
Sbjct: 431  LRYDPVELDPEEMCKMAVEQPQVLANYSVSDAVATYYLYMKYVHPFIFALATIIPLEPDE 490

Query: 463  VLRKGSGTLCEMLLMVQAYKANVICPNKHQSDPEKFYRN-HLLESETYIGGHVECLESGV 521
            +LRKGSGTLCE LLM +A+  N++ PNK   +  K   + H+L+SETY+GGHVE LESGV
Sbjct: 491  ILRKGSGTLCESLLMKEAFNVNIVFPNKQIGELNKLSTDGHVLDSETYVGGHVEALESGV 550

Query: 522  FRSDLPTSFKLDPSAYEQLLNNLDRDLQYAIKVEGKMDLESVSNYDEVKNAIMEKLLRLQ 581
            FR+D+ T F+LDP    QL  N+D+ L++AI  E  + L+ V N +EVK  I   L +L 
Sbjct: 551  FRADISTRFRLDPDMIRQLQQNVDKVLEHAIVTEEGVPLDDVLNLEEVKQTIQGALQQLH 610

Query: 582  EEPIREECPLIYHLDVAAMYPNIILTNRLQPPSIVTDEVCTACDFNRPGKTCLRKLEWVW 641
            + P R E P+IYHLDV AMYPNIILTNRLQP S+V+D  C AC +NRP   C R +EW+W
Sbjct: 611  DIPTRLEQPVIYHLDVGAMYPNIILTNRLQPSSMVSDSDCAACQYNRPEARCKRNMEWLW 670

Query: 642  RGEIFMGKRSDYYHLKKQIESE-FVDGTNGHLSKSFLDLPKMEQQSRLKDRLKKYCQKAY 700
            RGE+    R+++  +++Q+E+E F     G   ++F +L + +Q +  K RL  YC+KAY
Sbjct: 671  RGEMLPASRNEFQRIQQQLETEKFPPLFPGGAQRAFHELSREDQAAYEKKRLADYCRKAY 730

Query: 701  KRVLDKPVTEL--REAGICMRENSFYVDTVRSFRDRRYEYKGLNKVWKGKLSEAKASGNS 758
            K+     VT L  R + IC RENSFYVDTVR+FRDRRYEYKGL KV K  ++ A  SG++
Sbjct: 731  KKT---KVTRLETRTSTICQRENSFYVDTVRAFRDRRYEYKGLTKVAKAAVTAAVKSGDA 787

Query: 759  IKIQEAQDMVVLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARL 818
             +I+ A+   VLYDSLQLAHKCILNSFYGYVMRKGARW+SM MAG+V  TG+ II  AR 
Sbjct: 788  GEIKAAKGREVLYDSLQLAHKCILNSFYGYVMRKGARWHSMPMAGIVCLTGSNIITKARE 847

Query: 819  LIEKIGKPLELDTDGIWCVLPGSFPENFTFKTKDLKKK-LTISYPCVMLNVDVARNNTND 877
            +IE++G+PLELDTDGIWC+LP SFP+  TF TK  KKK + +SYP  +LN  V  + TND
Sbjct: 848  IIERVGRPLELDTDGIWCILPASFPQEVTFHTKHAKKKSINVSYPNAVLNTMVKDHFTND 907

Query: 878  QYQTLVDPVSKT-------YETHSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFND 930
            QY  L  P + +       Y    E SI FEVDGPY AM+LPA+KEEG  +KKRYAVFN 
Sbjct: 908  QYHVLERPAAPSEGREEAEYSVRKENSIFFEVDGPYLAMVLPAAKEEGKRLKKRYAVFNF 967

Query: 931  DGTLAELKGFEIKRRGELKLIKVFQAELFDKFLHGSTIEECYSAVAAVANRWLDLLDNQG 990
            DG+LAELKGFE+KRRGEL+LIK+FQ+ +F+ FL GST+E+CY+AVA +A+ WLD+L ++G
Sbjct: 968  DGSLAELKGFEVKRRGELQLIKIFQSSVFEAFLQGSTLEQCYAAVAKIADYWLDVLYSKG 1027

Query: 991  KDIADSELIDYISESSTMSKSLADYGEQKSCAVTTARRLSDFLGDTMVKDKGLRCQYIVA 1050
             ++ DSEL + ISE+ +MS+ L DYG+QKS +++TA+RL++FLGD MVKD GL C+++++
Sbjct: 1028 HNMPDSELFELISENRSMSRKLEDYGQQKSTSISTAKRLAEFLGDQMVKDAGLACKFVIS 1087

Query: 1051 CEPQGTPVSERAVPVAIFETDAEIMKFYLRKWCKTSS--DVGIRSIVDWSYYKQRLSSAI 1108
             +P+G PV+ERA+P+AIF+++  + + YLR+W K S+  D  IR ++DW YY +RL   I
Sbjct: 1088 RKPEGAPVTERAIPLAIFQSEPSVRRHYLRRWLKDSTMGDADIRDVLDWGYYIERLGGTI 1147

Query: 1109 QKIITIPAAMQKVSNPVPRVVHPDWLYKKVREKEDKFRQRKLVDIFSSLKKDDFLNKTCN 1168
            QKIITIPAA+Q ++NPVPRV HPDWL++K+ EK D  +QR++ ++F++  +         
Sbjct: 1148 QKIITIPAALQGLNNPVPRVQHPDWLHRKMLEKNDTLKQRRISEMFTARVEKP------- 1200

Query: 1169 AETNLMDENVEDLEDFPKKRRNSVNGPRPIVRCFEVNNEQKTVKTTDQVDSLRQQLEPSE 1228
                    ++ D+ED  + + N   G     +     + +       +  + R+ L    
Sbjct: 1201 -----APPSLTDVEDLVQSQSNGGTGTPGASKRQRERSVEVPATAEPEPKTWREAL---- 1251

Query: 1229 VSDQQPSSQNAIDTENIDRIVDYKGWLELKKRKWKDNLDRRKKQKLGSLRASHQA---NG 1285
                 P S      E I+       W+   KRKW+  L+ R +      R S +    +G
Sbjct: 1252 ---GDPPSPGNTREELIE-------WIRFHKRKWRWQLEYRDRHYREGRRGSKRMRRDDG 1301

Query: 1286 VSESLGDMINHKEAQRRTGVGSYFRRQETAMTRCHWQIIQLVPSSQSGVFLAWVVVEGIM 1345
             S S    +      R T +G + R+ + ++ +  WQI+Q++P    G F  W VV   +
Sbjct: 1302 ASTSATMTL---ATARATTLGGFLRKTQQSLIQQTWQIVQVLPVDDLGHFTIWAVVGEEL 1358

Query: 1346 VRIPITVPRLFYLNSKDPIVE-----------KFPGRRVNKTLPHGRRSFNLIEVMIDED 1394
             ++ +TVPR+FY+N + P+             K   ++V++ LP  R   +L + ++ E 
Sbjct: 1359 HKVRLTVPRIFYVNQRTPVPSEPTEDGSSSGNKSMWKKVHRVLPRARPVHHLYQYIVPEQ 1418

Query: 1395 QFRKESKKLAALLADPEVE 1413
             FR     L A LA P++E
Sbjct: 1419 VFRDNRLGLLADLATPDIE 1437



 Score =  278 bits (710), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 180/565 (31%), Positives = 287/565 (50%), Gaps = 58/565 (10%)

Query: 1442 LARYAHILWISDDGVPDLGGTSEEDECFADEVHQP---VLTYPGAYRKVSVELKIHHLSV 1498
            L R   +LW S  G PDLGG   +D     E       V    G YR V VEL +  L+V
Sbjct: 1708 LLRNNFVLWCSSGGRPDLGGREADDGRLLAEFEDSTSIVQNRAGLYRTVCVELTVESLAV 1767

Query: 1499 NALLKSNQVNEMEG-GGLFGFD-------QDMNSGPYNNELCGFDETTSSAPAFRVVKQL 1550
            +ALL++++V E+EG      FD       +++ +      L  +DET   + AFRV++ L
Sbjct: 1768 SALLQASKVQELEGTSSAITFDTVPQASLEELITAVGGQPLSSYDETALCSQAFRVMRSL 1827

Query: 1551 IQRCLTDAVTSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEFRK 1610
            +   L +   + NVFAD  + H YRW+ S  + L+DP L R L+ +M+K+F  ++AEF++
Sbjct: 1828 VNAWLREVSINRNVFADFQIVHFYRWVRSSRALLYDPALRRALNTLMRKLFLQIVAEFQR 1887

Query: 1611 LGATIIFANFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLFMD 1670
            + A II+A+F+++IIDTGK  +  A  Y D +++ +++RELF  + L     W  LL++D
Sbjct: 1888 MKADIIYADFNRIIIDTGKRTVVDAIGYTDYVVQNIRSRELFHSVSLSFQQAWEFLLWID 1947

Query: 1671 QYNYGGIPARADESLDDDSQVDIVSSWNIAEYLPKEIQDHFVLVVSEFMYIPWKHAQKLA 1730
              NYGG+ A   +     S          AE  P    +       + + + W  +++L 
Sbjct: 1948 PTNYGGVRANLPKEATSGS----------AEQ-PGTQVEDEQEEEEQALEMNWSLSEQLP 1996

Query: 1731 ASRASLQEGSSCTPSITVAAAENFESHIVQYVKGEISSYFTGKLLSIVRDAIHHM-KKMN 1789
             +R        C         ENFE+ +V +++           L  +  A + M +KM+
Sbjct: 1997 EAR-------RCR--------ENFENFLVSFLQAMAEGVTPASGLKRLACAAYAMVQKMH 2041

Query: 1790 NDQHNSPGVMQTAANIHKVDAP-LEFIKHVCAAFALDQNVQHDVLVMRKNLLKYVRVREF 1848
                   G  + A      D P LEF+K +  A  + ++   ++  MR+N+L+ + V EF
Sbjct: 2042 E------GYARGA------DGPALEFVKAITRALQVTKDTDEELTGMRRNMLRLIGVGEF 2089

Query: 1849 APEAEFRDPCPSFILPNVICSYCNDCRDLDLCRDMALLAQD-----WHCAMPQCGQPYDR 1903
            + +A +R+   S++LP VIC  CN CRDLDLC+D     +D     W CA  QC   YD 
Sbjct: 2090 SEKAHWREAVKSYVLPEVICQACNHCRDLDLCKDTHRALKDGQQPVWLCA--QCNVDYDN 2147

Query: 1904 EVMENALLQIVRQRERLYHLQDLVCIRCNQVKAAHLAEQCACAGSFRCKEDASDFRSKMQ 1963
              +E  LL +V+++   Y LQD  CI+C Q+K  +LA+ C C G++     A+D R  +Q
Sbjct: 2148 VEIEMRLLDVVQRKLMSYTLQDQRCIKCKQIKRENLAKHCPCTGAYENLISAADLRRLLQ 2207

Query: 1964 IFLNIANRQGFQLLQECTSWILEVQ 1988
             F  +A+     +L+E    +L+ Q
Sbjct: 2208 TFQALAHEYRMPILEETVQHVLQTQ 2232


>gi|46123375|ref|XP_386241.1| hypothetical protein FG06065.1 [Gibberella zeae PH-1]
          Length = 2852

 Score = 1310 bits (3389), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 674/1418 (47%), Positives = 932/1418 (65%), Gaps = 82/1418 (5%)

Query: 27   LEAKLGYDLFSEGDKRLGWLLTFASSSLEDEDTRKVYSCIDLYFVSQDGSTFKSKYKFRP 86
            ++  +G+  +  G KR GWL+    +++ED+ T    + +D YF+ +DGSTFK+  +F P
Sbjct: 53   IDENMGFARYESGKKREGWLVNIQPTAIEDDKTPGGRAAVDCYFIEEDGSTFKATVEFEP 112

Query: 87   YFYAATKEKMEMDVEAYLRR-RYESQIADIEILEKEDLDLKNHLSGLHKSYLKISFDTVQ 145
            YF  A K+  E +VE + +R   +  +  I  +EK+DL++ NHL G  +++L++ F  V 
Sbjct: 113  YFLIAVKKGHEAEVEDWAKRVPGDGVVKSIRRVEKDDLNMPNHLLGYRRTFLELKFTNVS 172

Query: 146  QLMDVKKDLLHVVERNQAKFDAAEAYESILTGKR----------------EQRPQDFLDC 189
             LM  ++D++ + E+N+   +A +AY  + T                        D  D 
Sbjct: 173  DLMAARRDIMPIAEKNKKNINAMDAYAEVATHNNGGFDLFDDSRDDDRNTNNAHSDASDF 232

Query: 190  IVDLREYDVPYHIRFAIDNDVRCGQWYDV----SISSTGPLLEKRVDLLQRAEVHVCAFD 245
            IVD+REYDVPYH+R  ID D+R G WY V     ++   P  E+ +     A+  V A+D
Sbjct: 233  IVDIREYDVPYHVRVMIDLDIRAGTWYFVEAKHGVTKIYPNEERSLP----ADPVVMAYD 288

Query: 246  IETTKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVT 305
            IET+K PLKFPDA  D I+MISYM+DGQG+LI NR+ + EDI D +YTPKPE+ G F + 
Sbjct: 289  IETSKQPLKFPDAASDQIIMISYMIDGQGFLITNRQILSEDIGDFDYTPKPEYPGPFMIF 348

Query: 306  NVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDKNQ 365
            N  +E  L+  +F H++E +P +  TYNGD+FDWPF+E RA+ +G  M +E+G++ D N+
Sbjct: 349  NEPDEKSLIERFFLHIKEARPTVIATYNGDFFDWPFVEARASINGIDMYQEIGWKKD-NE 407

Query: 366  GECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQM 425
             + +  ++ H+DCF WV RDSYLPQGS+GLKAVT AKLGYDP E++PE M  +A E+PQ 
Sbjct: 408  DQYKCAYSVHMDCFHWVNRDSYLPQGSRGLKAVTVAKLGYDPDELDPELMTPYATERPQT 467

Query: 426  MASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANV 485
            +A YSVSDAVATYYLYM YVHPFIFSL TI+P+S DEVLRKG+GTLCEMLLMVQAY+  +
Sbjct: 468  LAEYSVSDAVATYYLYMKYVHPFIFSLCTILPLSGDEVLRKGTGTLCEMLLMVQAYQREI 527

Query: 486  ICPNKHQSDPEKFYRNHLLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQLLNNLD 545
            + PNK+ +  E F+  HLL+SETY+GGHVE +E+GVFR+D+P  F +DP A ++LL +LD
Sbjct: 528  VLPNKYITPKEAFWDGHLLDSETYVGGHVESIEAGVFRADIPVDFAVDPGAIDELLTDLD 587

Query: 546  RDLQYAIKVEGKMDLESVSNYDEVKNAIMEKLLRLQEEPIREECPLIYHLDVAAMYPNII 605
              L++ + VE +   E V NY+EVK  I+E+L +L+E P R E PLIYHLDVA+MYPNI+
Sbjct: 588  AALKFVVTVEEQKKFEDVENYEEVKAQIVERLNKLKETPNRHEKPLIYHLDVASMYPNIM 647

Query: 606  LTNRLQPPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYYHLKKQIESEFV 665
             TNRLQP S++ +  C ACDFNRPGKTC R++ W WRGE    KR +Y  ++  +E+E  
Sbjct: 648  TTNRLQPDSMIQESDCAACDFNRPGKTCDRRMPWAWRGEYIPAKRDEYNMIRHALENEKF 707

Query: 666  DGT-NGHLSKSFLDLPKMEQQSRLKDRLKKYCQKAYKRVLDKPVTELREAGICMRENSFY 724
             G       + F DL   EQ + ++ RL+ Y QK Y ++ D   T +REA IC REN FY
Sbjct: 708  PGKFPSSPMRPFQDLSADEQAALVRKRLQLYSQKVYHKIHDS-TTIVREAIICQRENPFY 766

Query: 725  VDTVRSFRDRRYEYKGLNKVWKGKLSEAKASGN-SIKIQEAQDMVVLYDSLQLAHKCILN 783
            ++TVR FRDRRY+YKG  KVWKGK S  +++G    ++  A+ M++LYDSLQLAHK ILN
Sbjct: 767  INTVRDFRDRRYDYKGKAKVWKGKTSTLQSAGAPQNEVDAAKKMIILYDSLQLAHKVILN 826

Query: 784  SFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLPGSFP 843
            SFYGYVMRKG+RWYS++MAGV   TGA IIQ AR L+E++G+PLELDTDGIWC+LP +FP
Sbjct: 827  SFYGYVMRKGSRWYSLDMAGVTCLTGAHIIQMARQLVERLGRPLELDTDGIWCMLPATFP 886

Query: 844  ENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEFEVD 903
            ENF+FK K   KKL ISYPCVMLN  V    TN QYQTLVD  +  YETHS+ SI FEVD
Sbjct: 887  ENFSFKLKG-GKKLNISYPCVMLNHLVHAKFTNHQYQTLVDQKTLKYETHSDNSIFFEVD 945

Query: 904  GPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFL 963
            GPYKAM+LP SKEE   +KKRYAVFNDDG+LAELKGFE+KRRGELKLIK+FQ ++F  FL
Sbjct: 946  GPYKAMVLPTSKEEDKNLKKRYAVFNDDGSLAELKGFEVKRRGELKLIKIFQQQIFKFFL 1005

Query: 964  HGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLADYGEQKSCAV 1023
             G T+ +CY AVA VANRWLD+L ++G  +AD EL++ ISE+ +MSK+L +YG QKS ++
Sbjct: 1006 EGETLADCYGAVAKVANRWLDVLHSKGTTLADEELMELISENRSMSKTLEEYGNQKSTSI 1065

Query: 1024 TTARRLSDFLGDTMVKDKGLRCQYIVACEPQGTPVSERAVPVAIFETDAEIMKFYLRKWC 1083
            TTA+RL+DFLG+ MVKDKGL C++I+   P+  PV+ERA+PVAIF  +  + + YL+KW 
Sbjct: 1066 TTAKRLADFLGEQMVKDKGLNCKFIICARPKNAPVTERAIPVAIFSAEESVKRTYLKKWL 1125

Query: 1084 KTS-SDVGIRSIVDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLYKKVREKE 1142
            K   +D   R+++DW YY +RL S IQK+ITIPAA+QKV NPVPRV HPDWL +++  K+
Sbjct: 1126 KEEPTDTDPRALLDWDYYLERLGSVIQKLITIPAALQKVRNPVPRVPHPDWLQRRINIKD 1185

Query: 1143 DKFRQRKLVDIFSSLKKDDFLNKTCNAETNLMDENVEDLEDFPKKRRNSVNGPRPIVRCF 1202
            DK +Q+KL D+F     +D         T L    ++D+EDF  K          +++  
Sbjct: 1186 DKLKQKKLTDLFKKTPLEDI--------TGLKGAGMDDVEDFGSK----------LLKPK 1227

Query: 1203 EVNNEQKTVKTTDQVDSLRQQLEPSEVSDQQPSSQNAIDTENIDRIVDYKGWLELKKRKW 1262
            +V      +  + Q  +++++  P  V +  P S  A+         +Y+ +L  +K+KW
Sbjct: 1228 QVG----AIIASSQAATVQKRKSPEPVENPDPMS--ALPEVMPSASENYEEFLMYQKQKW 1281

Query: 1263 KDNLDR--RKKQKLGSLRASHQANGVSESLGDMINHKEAQRRTGVGSYFRRQETAMTRCH 1320
            K   +   R++Q  G  R            G  +N+ +          F +Q       +
Sbjct: 1282 KIQKEARIRRRQLFGDRR------------GGAVNNLQQT--------FMKQAHTTYMSN 1321

Query: 1321 WQIIQLVPSSQSGVFLAWVVVEGIMVRIPITVPRLFYLNSK-----DPIVEKFPGRRVNK 1375
            WQ++ L  +   G+ +A+V+++  +  + + VPR  +LN K     D  V+     +VN 
Sbjct: 1322 WQVLHLKTTETPGIVMAYVLIDAKIHTLKVNVPRQVFLNLKSKDLPDVEVDGCEVEQVNY 1381

Query: 1376 TLPHGRRSFNLIEVMIDEDQFRKESKKLAALLADPEVE 1413
            TLP+G  S +L ++ + ED +  ES+K + L   P VE
Sbjct: 1382 TLPNGHPSSHLFKLTVSEDIYFNESEKFSLLFNHPSVE 1419



 Score =  259 bits (661), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 170/628 (27%), Positives = 292/628 (46%), Gaps = 76/628 (12%)

Query: 1407 LADPEVEVLGWQQNAAKIGMQRCAASSQWFNERISLARYAHI------------------ 1448
            +AD  +  LGWQ   AK  +        W     +LARY  +                  
Sbjct: 1615 IADSSLPPLGWQSVIAKRLVGHYLGLGSWILHLTALARYGDVPLCNLERDDPRFLIDIAY 1674

Query: 1449 ----------LWISDDGVPDLGGTSEEDECFA-DEVHQPVLTYPGAYRKVSVELKIHHLS 1497
                      LW S D  PD  G  ++D     D V  P +  PG +  V ++L + +L+
Sbjct: 1675 ARRLQSNGVVLWWSPDARPDHAGYEKDDLLGPLDTVKMPNINNPGTFSSVCIDLDVRNLA 1734

Query: 1498 VNALLKSNQVNEMEGGGLFGFDQDMNSGPYNNELCGFDETTSSAPAFR-----VVKQLIQ 1552
            +N +L S+ +NE+EG     F          N      ET +S  AF      V++++++
Sbjct: 1735 INTILTSSLINELEGADSVSF----------NPAADDSETLTSESAFANAGVLVLREMVK 1784

Query: 1553 RCLTDAVTSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEFRKLG 1612
               T+A   G+  AD ++QHL RW+ +P S ++D  LH  +  + +K F  L+A+FR++G
Sbjct: 1785 SWWTEAC-RGSTMADVLVQHLVRWVENPDSFMYDRALHYYVQMMSRKAFQQLMADFRRVG 1843

Query: 1613 ATIIFANFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLFMDQY 1672
            + +IFAN +++I+ T K ++  A AY   ++K+++++ LF +I+LE   +W  L++ D++
Sbjct: 1844 SQVIFANANRLILQTTKAEVGNAYAYSQYIIKSIKSKPLFHFIDLEIKEYWDYLVWYDEF 1903

Query: 1673 NYGGIPARADESLDDDSQ-VDIVSSWNIAEYLPKEIQDHFVLVVSEFMYIPWKHAQKLAA 1731
            NYGG      E ++ + Q ++ + +W +A +LP ++Q  F   V EF+       Q +  
Sbjct: 1904 NYGG--KACQEVVEAEEQTLETIMNWQMATFLPAQLQSTFHDWVVEFI-------QLMHQ 1954

Query: 1732 SRASLQEGSSCTPSITVAAAENFESHIVQYVKGEISSYFTGKLLS--IVRDAIHHMKKMN 1789
             +         TP +T   ++  E H     +G+I     GK     + +D I  + +  
Sbjct: 1955 LKRPHNGDPDATPRLTQLPSKGLEEH-----EGQIGQIILGKAFEKPLKKDIIGLLNRQK 2009

Query: 1790 ND--------QHNSPGVMQTAANIHKVDAPLEFIKHVCAAFALDQNVQHDVLVMRKNLLK 1841
             +         +  P +  +  N+   +  LE +K +    +LD+N+  +  ++RK LL 
Sbjct: 2010 RELLHPELAGDYTFPSLPGSHLNLR--NPILELVKSLMQILSLDKNITLEARLLRKELLA 2067

Query: 1842 YVRVREFAPEAEFRDPCPSFILPNVICSYCNDCRDLDLCRDMALLAQD--WHCAMPQCGQ 1899
               +REF+ E  F +P  S  LP V C  C   RDLDLCRD  L  +   W C    CG 
Sbjct: 2068 LFEIREFSKEGAFANPSESLRLPQVSCDSCTMMRDLDLCRDEDLFGEGAAWRCGF--CGT 2125

Query: 1900 PYDREVMENALLQIVRQRERLYHLQDLVCIRCNQVKAAHLAEQCACAGSFRCKEDASDFR 1959
             +DR  +E  LL IV      +  QDL C+RC  ++     E C C+G ++      D  
Sbjct: 2126 EFDRVAIEERLLGIVESWVVEWTTQDLKCVRCGALRTNDFMEHCTCSGEWKEVVSRQDVS 2185

Query: 1960 SKMQIFLNIANRQGFQLLQECTSWILEV 1987
             ++ +   +A     ++L +    + +V
Sbjct: 2186 KRLGVMKRVAKFYELRMLSDVVEGLDQV 2213


>gi|307212306|gb|EFN88114.1| DNA polymerase epsilon catalytic subunit A [Harpegnathos saltator]
          Length = 2258

 Score = 1309 bits (3387), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 670/1412 (47%), Positives = 934/1412 (66%), Gaps = 52/1412 (3%)

Query: 24   EEELEAKLGYDLFSEGDK--RLGWLLTFASSSLEDEDTRKVYSCIDLYFVSQDGSTFKSK 81
            +E + A   YD     D+  R+G+LL   ++ ++D+  ++V S +D YF+ +D + FK  
Sbjct: 40   KENIRADELYDFHKTTDRKERIGFLLNMHATEMKDD--KQVLSGVDYYFIEEDATRFKVS 97

Query: 82   YKFRPYFYAATKEKMEMDVEAYLRRRYESQIADIEILEKEDLDLKNHLSGLHKSYLKISF 141
              + PYFY   ++   ++V  +L ++Y   +  IE + KEDLDL NHL GL + YLK+ F
Sbjct: 98   LPYSPYFYILCRQGTFVEVSTFLSKKYIGILTKIETVYKEDLDLPNHLIGLKQKYLKLYF 157

Query: 142  DTVQQLMDVKKDLLHVVERNQAKFDAAEAYESILTGKREQRPQ-------DFLDCIVDLR 194
              +  L  VK+D++  V+ N+ +  +   Y ++L    +   Q       D +D ++D+R
Sbjct: 158  ANIVDLTKVKRDIMRAVKINRVREKSNTHYTNMLATTLQSTEQGNSRQNLDRMDNVLDIR 217

Query: 195  EYDVPYHIRFAIDNDVRCGQWYDVSIS-STGPLLEKRVDLLQRAEVHVCAFDIETTKLPL 253
            E+DVP+H+R +ID ++ CG WY V  + S  P++ ++ D+++  E  V A+DIETTKLPL
Sbjct: 218  EHDVPHHVRVSIDANIFCGTWYSVKTNGSDPPIITRKEDIIEPPEPIVLAYDIETTKLPL 277

Query: 254  KFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNVNNEIEL 313
            KFPDA+ D IMMISYM+DGQGYLI NRE +  DI + EYTPKPEFEG F + N  NE   
Sbjct: 278  KFPDANIDQIMMISYMIDGQGYLITNRELISSDIRNFEYTPKPEFEGPFMIFNEPNEKAT 337

Query: 314  LRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDKNQGECRAKFA 373
            +  +F H+ E KP I+VTYNGD+FDWPF+E RA  H   M E +GF  +++ G   ++ A
Sbjct: 338  ITRFFDHINETKPHIFVTYNGDFFDWPFVEARATIHDISMKERIGFSKNRD-GIYVSRAA 396

Query: 374  CHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQMMASYSVSD 433
             H+DC  WV+RDSYLP GSQ LKAV KAKL YDP+E++PEDM R A E+P+++A+YSVSD
Sbjct: 397  MHMDCLCWVRRDSYLPVGSQNLKAVAKAKLRYDPVELDPEDMCRLASEEPEVLANYSVSD 456

Query: 434  AVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVICPNKHQS 493
            AVAT+YLY  Y+HPFIF+L TIIPM PDEVLRKGSGTLCE LLMVQA+KAN+I PNK ++
Sbjct: 457  AVATFYLYQKYIHPFIFALCTIIPMEPDEVLRKGSGTLCESLLMVQAFKANIIFPNKQET 516

Query: 494  DPEKFYRN-HLLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQLLNNLDRDLQYAI 552
            +  K  ++ HLL+ ETY+GGHVE LESGVFR+D+P  FK+ PSA ++L+N ++  L++ I
Sbjct: 517  ELNKLTKDGHLLDQETYVGGHVEALESGVFRADIPCRFKIVPSAVDELINGVENTLKHTI 576

Query: 553  KVEGKMDLESVSNYDEVKNAIMEKLLRLQEEPIREECPLIYHLDVAAMYPNIILTNRLQP 612
            + E K+ +E V+N+DE+ N +  KL  L+++P+R E P+IYHLDV AMYPNIILTNRLQP
Sbjct: 577  QEEEKVPIEMVTNFDEIANEVRGKLKELRDQPLRIENPVIYHLDVGAMYPNIILTNRLQP 636

Query: 613  PSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYYHLKKQIESE-FVDGTNGH 671
             +IV +  C  CD+N+P   C RK++W+WRGE       +Y  +K+Q+E+E F     G 
Sbjct: 637  SAIVNEMDCAVCDYNKPDALCQRKMQWMWRGEYLAANLGEYQRIKQQLETERFPPQFPGG 696

Query: 672  LSKSFLDLPKMEQQSRLKDRLKKYCQKAYKRVLDKPVTELREAGICMRENSFYVDTVRSF 731
              ++F  L   EQ +  K RL +YC+KAYK+V     TE R   IC +ENSFYVDTVR+F
Sbjct: 697  SKRAFHQLTAKEQATFEKTRLTEYCKKAYKKV-KITRTEERTQTICQKENSFYVDTVRAF 755

Query: 732  RDRRYEYKGLNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHKCILNSFYGYVMR 791
            RDRRYEYK L KV K +++ A   G++ +I+ A++  VLYDSLQLAHKCILNSFYGYVMR
Sbjct: 756  RDRRYEYKALTKVAKRQVAAAVTEGDAAEIKSAKNKEVLYDSLQLAHKCILNSFYGYVMR 815

Query: 792  KGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLPGSFPENFTFKTK 851
            KGARW+SMEM G+V YTGA II  AR +IEKIG+PLELDTDGIWC+LP SFP++    T 
Sbjct: 816  KGARWHSMEMGGIVCYTGAHIIMRAREIIEKIGRPLELDTDGIWCILPASFPDSIVVHTT 875

Query: 852  DLKK-KLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEFEVDGPYKAMI 910
              KK K TISYP  +LN  V    TND Y  LVD  + TYE  +E SI FEVDGPY AM+
Sbjct: 876  HEKKSKFTISYPNAVLNFMVKDQFTNDVYHDLVDKDNLTYEIRNENSIFFEVDGPYLAMV 935

Query: 911  LPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFLHGSTIEE 970
            LPA+KEEG  +KKRYAVFN DG+LAELKGFE+KRRGEL+LIK+FQA +F+ FL G+T+EE
Sbjct: 936  LPAAKEEGKKLKKRYAVFNFDGSLAELKGFEVKRRGELQLIKIFQASVFESFLKGNTLEE 995

Query: 971  CYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLADYGEQKSCAVTTARRLS 1030
            CY++VA  A+ WLDLL ++  ++ DSEL + ISE+ +MS+ L DYG QKS +++TA+RL+
Sbjct: 996  CYASVAKDADYWLDLLYSKCANMPDSELFELISENKSMSRKLEDYGAQKSTSISTAKRLA 1055

Query: 1031 DFLGDTMVKDKGLRCQYIVACEPQGTPVSERAVPVAIFETDAEIMKFYLRKWCK--TSSD 1088
            +FLGD MVKD GL C+YI+A +PQ  PV+ERA+P+AIF+++  + + YL+KW K  T   
Sbjct: 1056 EFLGDEMVKDAGLACRYIIANKPQSAPVTERAIPLAIFQSEPAVRRHYLKKWLKDPTLYT 1115

Query: 1089 VGIRSIVDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLYKKVREKEDKFRQR 1148
              IR I+DW+YY +RL + IQKIITIPAAMQ ++NPVPRV +P WL+KKV E+    RQ+
Sbjct: 1116 DDIRDILDWNYYIERLGNTIQKIITIPAAMQGLANPVPRVQYPPWLHKKVMERGASHRQK 1175

Query: 1149 KLVDIFSSLKKDDFLNKTCNAETNLMDENVEDLE--DFPKKRRNSVNGPRPIVRCFEVNN 1206
            K+ DIF+   K    +      ++    ++ED        K+ ++V    PIV      N
Sbjct: 1176 KITDIFTRTIKKTTSDSVDEGSSSKETRDIEDSAGPSCGSKKPSTV----PIV------N 1225

Query: 1207 EQKTVKTTDQVDSLRQQLEPSEVSDQQPSSQNAIDTENIDRIVDYKGWLELKKRKWKDNL 1266
            ++K   + ++ ++++ +     +    P  +            +   WLE  K+KW    
Sbjct: 1226 KRKRRPSEEENEAIKSRSWKEALGSPPPRGKTK---------EERMKWLEFHKKKWAFQA 1276

Query: 1267 DRR--KKQKLGSLRASHQANGVSESLGDMINHKEAQRRTGVGSYFRRQETAMTRCHWQII 1324
             +R   +QK   + +     GV   +      + A   T  G + RR +  +    WQII
Sbjct: 1277 KQRHQHRQKRNRMMSDESDGGVWGVI------RNANTSTMDG-FLRRAQRKLLETPWQII 1329

Query: 1325 QLVPSSQSGVFLAWVVVEGIMVRIPITVPRLFYLNSKDPIVEKFPG---RRVNKTLPHGR 1381
            QL  + + G+F  W++VE  + ++ + VPR FY+N++    +  P    R+  K+LP  R
Sbjct: 1330 QLSETGEPGMFRLWILVEAQLHQVRLVVPREFYVNTRKARPDPGPNELWRKSFKSLPRSR 1389

Query: 1382 RSFNLIEVMIDEDQFRKESKKLAALLADPEVE 1413
              +NL    + E  F++ S++L   L+ PE+E
Sbjct: 1390 PVYNLYRYSLPESLFQEHSRELLEDLSKPEIE 1421



 Score =  267 bits (683), Expect = 4e-68,   Method: Compositional matrix adjust.
 Identities = 172/591 (29%), Positives = 289/591 (48%), Gaps = 48/591 (8%)

Query: 1431 ASSQWFNERISLARYAH----ILWISDDGVPDLGGTSEEDECFA---DEVHQPVLTYPGA 1483
            A    F   +  AR+ H    +LW S    PDLGG+  +D       +E        PG 
Sbjct: 1664 ADPTLFGADLFYARHLHRNNFVLWCSPTEKPDLGGSENDDNRLLTDFEESSSCAANNPGT 1723

Query: 1484 YRKVSVELKIHHLSVNALLKSNQVNEMEGGGLF-GFD-------QDMNSGPYNNELCGFD 1535
            Y  V V+L +  L+VNALL+ + +++++G   F  F        QD+ +G     +  +D
Sbjct: 1724 YSSVCVQLDVESLAVNALLQYHHIHDIDGTSTFVAFHNQQRPSVQDIVTGDAATIIPSYD 1783

Query: 1536 ETTSSAPAFRVVKQLIQRCLTDAVTSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHK 1595
            E T   PAF+ ++ ++   L +     NVFAD  L H YRWL S ++ L+DP L R LH 
Sbjct: 1784 EITLCNPAFKTLRSMVNAWLLEVSVYKNVFADYQLIHFYRWLRSSNALLYDPALRRTLHT 1843

Query: 1596 VMQKVFAMLLAEFRKLGATIIFANFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWI 1655
             M+K++  L+AEF+ LG  ++FANF+K+I+ T K  ++ A +Y + +++ ++ +ELF  I
Sbjct: 1844 YMKKLYIQLIAEFKTLGCIVVFANFNKIIMCTRKRSVTDALSYMEFVVQTIRNKELFHSI 1903

Query: 1656 ELEPVHFWHSLLFMDQYNYGGIPA------RADESL----------DDDSQVDIVSSWNI 1699
            E+     W  L+++D +N+ GI         A+ S           D D   +IV +W++
Sbjct: 1904 EITFDQCWEYLVWLDLHNHAGIKGLIAKENDANNSTEESGNNTTENDKDDTPEIVMNWSL 1963

Query: 1700 AEYLPKEI--QDHFVLVVSEFM-----YIPWKHAQKLAASRASLQEGSSCTPSITVAAAE 1752
             E LPK    Q  F  VV+ ++     Y+      K    R    +  S T  + + A E
Sbjct: 1964 MECLPKGAGCQASFNAVVAGYINAVYQYMVENEVNKTTRPRRRQSQSQSFTMPLGLGALE 2023

Query: 1753 NFESHIVQYVKGEISSYFTGKLLSIVRDAIHHMKKMNNDQHNSPGVMQTAANIHKVDAPL 1812
            N      + + GE+S     KL  I +    ++ +        P +        K++  L
Sbjct: 2024 NTAEFAKKLISGEMSQ----KLFKITQKIYRNLPEKVLSLEEYPNLDMGGKESIKINPAL 2079

Query: 1813 EFIKHVCAAFALDQNVQHDVLVMRKNLLKYVRVREFAPEAEFRDPCPSFILPNVICSYCN 1872
            E IK +C   +LD+ V+++V  ++ NLL+ + V   +   ++++PC S IL  VIC  CN
Sbjct: 2080 ELIKAICKVLSLDKEVENEVYNLKSNLLRLIGVGSHSDSVDWKEPCISLILSEVICKACN 2139

Query: 1873 DCRDLDLCRDMALLAQD----WHCAMPQCGQPYDREVMENALLQIVRQRERLYHLQDLVC 1928
              RD+DLC+D     ++    W C  P C   YD   +E  L+  + ++   Y LQDL C
Sbjct: 2140 HTRDIDLCKDQHYTIENNKHIWKC--PICETSYDNAEIEFLLIDRLNRKSMGYVLQDLQC 2197

Query: 1929 IRCNQVKAAHLAEQCACAGSFRCKEDASDFRSKMQIFLNIANRQGFQLLQE 1979
             +C  +K  +++ QC+C+G +       +  + + +  +IA++    +L E
Sbjct: 2198 QKCKGIKRENMSMQCSCSGLYGNLIPQDEITTFVNVCKSIASKCKMNILAE 2248


>gi|391346519|ref|XP_003747520.1| PREDICTED: LOW QUALITY PROTEIN: DNA polymerase epsilon catalytic
            subunit A-like [Metaseiulus occidentalis]
          Length = 2195

 Score = 1309 bits (3387), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 666/1407 (47%), Positives = 935/1407 (66%), Gaps = 53/1407 (3%)

Query: 25   EELEAKLGYDLFSEGDKRLGWLLTFASSSLEDEDTRKVYSCIDLYFVSQDGSTFKSKYKF 84
            ++++A+ G++  +E  +R+G+++ F ++ + DED R + + +D YF+ ++G+ FK    F
Sbjct: 42   DKIDARYGFERCTEATERVGFMVNFQATEILDEDKRLI-AALDCYFLEENGTRFKISVPF 100

Query: 85   RPYFYAATKEKMEMDVEAYLRRRYESQIADIEILEKEDLDLKNHLSGLHKSYLKISFDTV 144
            +PY Y       E ++ +YL R+Y+  ++  E++ KEDLDL NHLSGL + Y+K +F   
Sbjct: 101  KPYLYVLVAGGTEQEISSYLLRKYQGYLSVCEMVMKEDLDLLNHLSGLKQQYIKCTFSNT 160

Query: 145  QQLMDVKKDLLHVVERNQAKFDAAEAYESILTGKREQRPQDFLDCIVDLREYDVPYHIRF 204
              L  V+++LL +V++N+    +A    S           D L  I+D+RE+DVPYH+R 
Sbjct: 161  TDLQKVRRELLPIVKKNKLDKTSAAGANS-----------DVLKNILDMREHDVPYHVRV 209

Query: 205  AIDNDVRCGQWYDVSIS-STGPLLEKRVDLLQRAEVHVCAFDIETTKLPLKFPDADYDII 263
            +ID  +  G WY V +  S  P++ ++ DLL   ++ V A+DIET+KLPLKFPD+  D I
Sbjct: 210  SIDLKLFVGLWYTVKVQHSKSPIITRKQDLLATPDICVLAYDIETSKLPLKFPDSASDQI 269

Query: 264  MMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNVNNEIELLRLWFAHMQE 323
            MMISYM+DG GYLI N+E V E++ED EYTPKPEF+G F + N  NE  LL  +F H+ +
Sbjct: 270  MMISYMIDGHGYLITNKEIVSENVEDFEYTPKPEFQGQFTIFNEENENALLVKFFDHILD 329

Query: 324  VKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDKNQGECRAKFACHLDCFAWVK 383
            V+P +  TYNGD FDW F+E RA  H   M++ +G+   + +G   ++   H+DC  WVK
Sbjct: 330  VQPLVIATYNGDNFDWMFVEARANFHKLDMNKYVGWSRGR-EGFYLSRACIHMDCLHWVK 388

Query: 384  RDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQMMASYSVSDAVATYYLYMT 443
            RDSYLP GSQ LKAV KAKL YDP+E++PE MV  A++ PQ++A+YSVSDAVATYYLYM 
Sbjct: 389  RDSYLPVGSQNLKAVAKAKLRYDPVELDPELMVAMAQDNPQVLANYSVSDAVATYYLYMK 448

Query: 444  YVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVICPNKHQSDPEKFYRN-H 502
            YVHPFIF+L TIIP  PDEVLRKGSGTLCE LLMV+A++A +I PNK ++   K   + H
Sbjct: 449  YVHPFIFALCTIIPTQPDEVLRKGSGTLCESLLMVKAFEAEIIYPNKQENIFNKISEDGH 508

Query: 503  LLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQLLNNLDRDLQYAIKVEGKMDLES 562
            +L+ ETY+GGHVE LESGVFR+D+P  F+L P A+++L++ +D  ++ AI VE  +  ES
Sbjct: 509  VLDQETYVGGHVEALESGVFRADIPCRFRLVPQAFQKLIDEVDETMKRAITVEESIPFES 568

Query: 563  VSNYDEVKNAIMEKLLRLQEEPIREECPLIYHLDVAAMYPNIILTNRLQPPSIVTDEVCT 622
            V N+DEV   I   L  L++ P R E P+IYHLDV AMYPNIILTNRLQP ++V    C 
Sbjct: 569  VQNFDEVCTDIKTALAGLRDCPNRLEKPIIYHLDVGAMYPNIILTNRLQPSAMVDVATCA 628

Query: 623  ACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYYHLKKQIESE-FVDGTNGHLSKSFLDLPK 681
            ACD+NRPG+ C R +EW WRGE+    R+++  +++Q+E+E FV   N      F +L  
Sbjct: 629  ACDYNRPGERCQRTMEWTWRGEMMPATRAEFQRIQQQLETETFVSPINPKKRVPFHELSD 688

Query: 682  MEQQSRLKDRLKKYCQKAYKRVLDKPVTELREAGICMRENSFYVDTVRSFRDRRYEYKGL 741
             ++ +  K RL+ YC++AY ++     T+L++  IC RENSFYVDTVR FRDRRYE+KGL
Sbjct: 689  EDRAAIEKKRLQDYCRRAYSKIRVTK-TQLKKTTICQRENSFYVDTVRQFRDRRYEFKGL 747

Query: 742  NKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHKCILNSFYGYVMRKGARWYSMEM 801
             K  KG ++EA   G++ +I+ A+++ +LYDSLQLAHKCILNSFYGYVMR+GARWYSMEM
Sbjct: 748  LKKAKGLVNEAVKRGDAAEIKSAKNLEILYDSLQLAHKCILNSFYGYVMRRGARWYSMEM 807

Query: 802  AGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLPGSFPENFTFKTKDLKK-KLTIS 860
            AG+V +TGA II  AR LIE+IG+PLELDTDGIWCVLP SFPENF  ++   KK K+ IS
Sbjct: 808  AGIVCHTGAGIIMKARELIEQIGRPLELDTDGIWCVLPASFPENFEIRSSFEKKPKVVIS 867

Query: 861  YPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEFEVDGPYKAMILPASKEEGIL 920
            YP  +LN+ V + NTNDQY  LVDPV + YE   E SI FEVDGPY AM+LPASKEEG  
Sbjct: 868  YPGAILNIMVQKLNTNDQYHELVDPVKRKYEIREENSIFFEVDGPYLAMVLPASKEEGKK 927

Query: 921  IKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFLHGSTIEECYSAVAAVAN 980
            +KKRYAVFN DG+LAELKGFE+KRRGEL+LIK+FQ+ +F+ FL G  +EECY++VA +A+
Sbjct: 928  LKKRYAVFNFDGSLAELKGFEVKRRGELQLIKIFQSSVFEAFLKGENLEECYASVAKIAD 987

Query: 981  RWLDLLDNQGKDIADSELIDYISESSTMSKSLADYGEQKSCAVTTARRLSDFLGDTMVKD 1040
             WLD+L ++   + D EL D ISE+ +MSK L DYG QKS +++TARRL++FLGD MVKD
Sbjct: 988  YWLDVLYSRASTMPDEELFDLISENRSMSKKLEDYGAQKSTSISTARRLAEFLGDQMVKD 1047

Query: 1041 KGLRCQYIVACEPQGTPVSERAVPVAIFETDAEIMKFYLRKW--CKTSSDVGIRSIVDWS 1098
             GL C+Y++A +P+G PV+ERA+P+AIF  +  + + +LRKW  C    D+ IRSI+DW+
Sbjct: 1048 AGLSCRYVIAKKPEGAPVTERAIPLAIFHAEPSVRRHFLRKWLKCYGDDDLDIRSILDWT 1107

Query: 1099 YYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLYKKVREKEDKFRQRKLVDIFS--S 1156
            YY +RL SAIQKIITIPAA+Q++ NPVPRV HP WL+KK+ EK+D  +Q+++ ++F+  +
Sbjct: 1108 YYIERLGSAIQKIITIPAALQQLRNPVPRVPHPSWLHKKLLEKDDVLKQKRINELFTAKA 1167

Query: 1157 LKKDDFLNKTCNAETNLMDENVEDLEDFPKKRRNSVNGPRPIVRCFEVNNEQKTVKTTDQ 1216
            L +    + +C    +   E  +D+ED       S   P        V++++   +  + 
Sbjct: 1168 LLRSIAFDSSCGXSKSSFQE--KDIEDMCGAATPSYMAP-----VMAVSHKRSRHEDAEN 1220

Query: 1217 VD-SLRQQLEPSEVSDQQPSSQNAIDTENIDRIVDYKGWLELKKRKWK-DNLDRRKKQKL 1274
            +D + R+ L P       PS     +        D+  WL   K KW    L R + +KL
Sbjct: 1221 IDKNWREILGPP------PSIGETSE--------DFDKWLTFHKNKWTHQKLQRDRLKKL 1266

Query: 1275 GSLRASHQANGVSESLGDMINHKEAQRRTG-----VGSYFRRQETAMTRCHWQIIQLVPS 1329
                 S+ A   +         K A+  +G     +G + ++ +  +    WQI+Q+VP+
Sbjct: 1267 AKRNKSNSAPLAAPGAESQPPLKRAKTCSGLKSNTLGGFLKKAQQNLLNSTWQIVQIVPA 1326

Query: 1330 SQSGVFLAWVVVEGIMVR-IPITVPRLFYLNSKDP--IVEKFPGRRVNKTLPHGRRSFNL 1386
             + GVF  WV++    +R + + VPR+FY+N + P    E    R+V + LP      +L
Sbjct: 1327 GEDGVFKVWVLIGNSELRQVRVGVPRIFYVNQRVPKDTEETTIYRKVMRHLPRAHPVHHL 1386

Query: 1387 IEVMIDEDQFRKESKKLAALLADPEVE 1413
             E  IDE  +   +  +AA L +P +E
Sbjct: 1387 YEYAIDESVYINNNDDIAAELGNPYIE 1413



 Score =  257 bits (656), Expect = 6e-65,   Method: Compositional matrix adjust.
 Identities = 168/563 (29%), Positives = 281/563 (49%), Gaps = 53/563 (9%)

Query: 1441 SLARYAHILWISDDGVPDLGGTSEEDECFADEVHQPVLTYPGAYRKVSVELKIHHLSVNA 1500
            +L +   +LW S    PDLGG   +D    +      +   G Y    VEL +  + V  
Sbjct: 1666 NLLKQNFLLWCSRSDRPDLGGKEADDNRSIEHDLCLQVNNEGMYTTTCVELDLQGIFVTT 1725

Query: 1501 LLKSNQVNEMEG-GGLFGFD-------QDMNSG--PYNNELCGFDETTSSAPAFRVVKQL 1550
            +L+++ + E+EG      FD       QDM SG     + + G+DE++  A AFR+++Q+
Sbjct: 1726 ILQAHTLAELEGISSNIAFDAVQAQTVQDMVSGGDQMGSNVSGYDESSQCAGAFRILRQM 1785

Query: 1551 IQRCLTDAVTSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEFRK 1610
            +   + D     N+FAD  L HL+RWL  PHS L +P L RIL  ++ K+F  L+AEF++
Sbjct: 1786 VSAFMKDVAVYQNIFADQQLSHLFRWLKDPHSLLFEPSLKRILDNLISKMFNQLVAEFQR 1845

Query: 1611 LGATIIFANFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLFMD 1670
            LG+ I+ A+ SK+I+ T +  +  A AY + ++ +++ +ELF  ++      +  LL+MD
Sbjct: 1846 LGSHIVHASLSKIILCTKRKTIEDASAYVEFVVNSMRNKELFHSVDFSVKQAYKILLWMD 1905

Query: 1671 QYNYGGIPARADESLDDDSQVDIVSSWNIAEYLPK-EIQDHFVLVVSEFMYIPWKHAQKL 1729
              N+GG+   AD+S D+   +     WN++++L    + + F + V  ++   ++H ++ 
Sbjct: 1906 PSNHGGVQRTADDSEDEVRML-----WNMSKFLSTPSLTESFNMTVGGYINALFQHLEQ- 1959

Query: 1730 AASRASLQEGSSCTPSITVAAAENFESHIVQYVKGEISSYFTGKLLSIVRDAIHHMKKMN 1789
                         TP          E + V+Y++  I   F+  L+++      H K   
Sbjct: 1960 -------------TPP---------EQNSVEYIQTLIREEFSQSLMTLTHKL--HEKYPT 1995

Query: 1790 NDQHNSPGVMQTAANIHKVDAPLEFIKHVCAAFALDQNVQHDV-LVMRKNLLKYV-RVRE 1847
             +   +  +  T A ++     LEF+K +    ++DQN+   V   ++++LLK    V  
Sbjct: 1996 GEFPKNALMKHTVARVY--SPSLEFVKMITRVLSVDQNIAQFVNSKLKRDLLKLCGGVGA 2053

Query: 1848 FAPEAEFRDPCPSFILPNVICSYCNDCRDLDLCRDMALLAQDWHCAMPQCGQPYDREVME 1907
            F+  A + DPC SF+L  VIC+ CN  RDLD+CRD       W C  PQC   Y+   +E
Sbjct: 2054 FSESAIWHDPCLSFVLSQVICTQCNCVRDLDVCRDTYTANGQWFC--PQCESLYEMAYIE 2111

Query: 1908 NAL---LQIVRQRERLYHLQDLVCIRCNQVKAAHLAEQCACAGSFRCKEDASDFRSKMQI 1964
            + +   LQ++  RE    LQDL C +CN VK  +++  C CAG F+   +  + +  +  
Sbjct: 2112 SLMVDSLQVISAREV---LQDLQCTKCNMVKEKNMSRYCECAGYFKNMTEVQNTKELLDT 2168

Query: 1965 FLNIANRQGFQLLQECTSWILEV 1987
            F  IA      +L E   W   V
Sbjct: 2169 FATIATAFKMDILLEHVKWTRSV 2191


>gi|195573120|ref|XP_002104543.1| GD21012 [Drosophila simulans]
 gi|194200470|gb|EDX14046.1| GD21012 [Drosophila simulans]
          Length = 2104

 Score = 1308 bits (3384), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 680/1413 (48%), Positives = 929/1413 (65%), Gaps = 88/1413 (6%)

Query: 25   EELEAKLGYDLFSEGDKRLGWLLTFASSSLEDEDTRKVYSCIDLYFVSQDGSTFKSKYKF 84
            +++++K G+D   +  +R G+L+   S+ + DED R++ + +DL+F+  DGS FK    +
Sbjct: 40   DKIDSKYGFDRVKDSQERTGYLINMHSNEVLDED-RRLIAALDLFFIQMDGSRFKCTVAY 98

Query: 85   RPYFYAATKEKMEMDVEAYLRRRYESQIADIEILEKEDLDLKNHLSGLHKSYLKISFDTV 144
            +PY     ++ M ++V  +L R+Y  QI+ +E + KEDLDL NHLSGL + Y+K+SF   
Sbjct: 99   QPYLLIRPEDNMHLEVARFLGRKYSGQISALEHITKEDLDLPNHLSGLQQQYIKLSFLNQ 158

Query: 145  QQLMDVKKDLLHVVERNQAKFDAAEAYESILTGKREQ------------RPQDFLDCIVD 192
              +  V+++L+  V+RNQ +  +   Y  +L     Q            R QD++DCIVD
Sbjct: 159  TAMTKVRRELMSAVKRNQERQKSNTYYMQMLATSLAQSSAGSEDATLGKRQQDYMDCIVD 218

Query: 193  LREYDVPYHIRFAIDNDVRCGQWYDVSISST--GPLLEKRVDLLQRAEVHVCAFDIETTK 250
            +RE+DVPYH+R +ID  + CGQWY++   S    P +  R D+L R E  V AFDIETTK
Sbjct: 219  IREHDVPYHVRVSIDLRIFCGQWYNIRCRSGVEMPTITCRPDILDRPEPVVLAFDIETTK 278

Query: 251  LPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNVNNE 310
            LPLKFPDA  D +MMISYM+DGQGYLI NRE +  +++D EYTPKPEFEG F V N  NE
Sbjct: 279  LPLKFPDAQTDQVMMISYMIDGQGYLITNREIISSNVDDFEYTPKPEFEGNFIVFNEENE 338

Query: 311  IELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDKNQGECRA 370
            ++LL+ +F H+ EV+P I VTYNGD+FDWPF+ETRAA +   M +E+GF   ++ G   +
Sbjct: 339  MQLLQRFFDHIMEVRPHIIVTYNGDFFDWPFVETRAAVYDLDMKQEIGFSKLRD-GNYLS 397

Query: 371  KFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQMMASYS 430
            + A H+DC  WVKRDSYLP GSQGLKAV KAKL YDP+E++PEDM R A E+PQ++A+YS
Sbjct: 398  RPAIHMDCLCWVKRDSYLPVGSQGLKAVAKAKLRYDPVELDPEDMCRMAVEQPQVLANYS 457

Query: 431  VSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVICPNK 490
            VSDAVATYYLYM YVHPFIF+L TIIPM PDE+LRKGSGTLCE LLMV+AY A ++ PNK
Sbjct: 458  VSDAVATYYLYMKYVHPFIFALNTIIPMEPDEILRKGSGTLCETLLMVEAYHAQIVYPNK 517

Query: 491  HQSDPEKFYR-NHLLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQLLNNLDRDLQ 549
            HQS+  K     H+L+SETY+GGHVE LESGVFR+D+P  F+LDP+  +QL   +D  L+
Sbjct: 518  HQSELNKLSNEGHVLDSETYVGGHVEALESGVFRADIPCRFRLDPAMVKQLQEQVDAVLR 577

Query: 550  YAIKVEGKMDLESVSNYDEVKNAIMEKLLRLQEEPIREECPLIYHLDVAAMYPNIILTNR 609
            +AI+VE  + LE V N DEV+  I++ L  L + P R E P+IYHLDV AMYPNIILTNR
Sbjct: 578  HAIEVEEGIPLEKVLNLDEVRQEIVQGLQGLHDIPNRLEQPVIYHLDVGAMYPNIILTNR 637

Query: 610  LQPPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYYHLKKQIESE-FVDGT 668
            LQP ++V+D  C ACDFN+PG  C R ++W+WRGE+    R+++  +++Q+E+E F    
Sbjct: 638  LQPSAMVSDLDCAACDFNKPGVRCKRSMDWLWRGEMLPASRNEFQRIQQQLETEKFPSLF 697

Query: 669  NGHLSKSFLDLPKMEQQSRLKDRLKKYCQKAYKRVLDKPVTELREAGICMRENSFYVDTV 728
             G   ++F +L K +Q              AY++                + NSFYVDTV
Sbjct: 698  PGGPQRAFHELSKEDQ-------------AAYEK---------------KQGNSFYVDTV 729

Query: 729  RSFRDRRYEYKGLNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHKCILNSFYGY 788
            R+F DRRYEYKGL KV K  ++ A ASG++ +I+ A+   VLYDSLQLAHKCILNSFYGY
Sbjct: 730  RAFPDRRYEYKGLTKVAKASVNAAVASGDAAEIKAAKGREVLYDSLQLAHKCILNSFYGY 789

Query: 789  VMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLPGSFPENFTF 848
            VMR+GARW+SM MAG+V  TG+ II  AR +IE++G+PLELDTDGIWC+LPGSFP+ FT 
Sbjct: 790  VMRRGARWHSMPMAGIVCLTGSNIITKAREIIERVGRPLELDTDGIWCILPGSFPQEFTI 849

Query: 849  KTK-DLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKT---YETHSECSIEFEVDG 904
             T  + KKK+ ISYP  +LN  V  + TNDQY  L          Y+   E SI FEVDG
Sbjct: 850  HTSHEKKKKINISYPNAVLNTMVKDHFTNDQYHELRKNKENNLPMYDIRDENSIFFEVDG 909

Query: 905  PYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFLH 964
            PY AM+LPA+KEEG  +KKRYAVFN DG+LAELKGFE+KRRGEL+LIK FQ+ +F+ FL 
Sbjct: 910  PYLAMVLPAAKEEGKKLKKRYAVFNFDGSLAELKGFEVKRRGELQLIKNFQSSVFEAFLA 969

Query: 965  GSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLADYGEQKSCAVT 1024
            GST+EECY++VA VA+ WLD+L ++G ++ DSE+   ISE+ +MSK L +YG QKS +++
Sbjct: 970  GSTLEECYASVAKVADYWLDVLYSRGSNLPDSEVFVLISENKSMSKKLEEYGAQKSTSIS 1029

Query: 1025 TARRLSDFLGDTMVKDKGLRCQYIVACEPQGTPVSERAVPVAIFETDAEIMKFYLRKWCK 1084
            TA+RL++FLG+ MVKD GL C+YI++ +P+G PV+ERA+P+AIF+++  + + +LR+W K
Sbjct: 1030 TAKRLAEFLGEQMVKDAGLACKYIISKKPEGAPVTERAIPLAIFQSEPSVRRHHLRRWLK 1089

Query: 1085 --TSSDVGIRSIVDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLYKKVREKE 1142
              T  D  IR ++DW+YY +RL   IQKIITIPAA+Q ++NPVPRV HPDWL+KK+ EK 
Sbjct: 1090 DNTMGDADIRDVLDWNYYIERLGGTIQKIITIPAALQGLANPVPRVQHPDWLHKKMLEKN 1149

Query: 1143 DKFRQRKLVDIFSSLKKDDFLNKTCNAETNLMDENVEDLEDFPKKRRNSVNGPRPIVRCF 1202
            D  +QR++ ++F+S  K   L           ++ + D+ED   K         PIV   
Sbjct: 1150 DVLKQRRINEMFTSRPKPKPLATE--------EDKLADMEDLAGKDGGEGAAGCPIV--- 1198

Query: 1203 EVNNEQKTVKTTDQVDSLRQQLEPSEVSDQQPSSQNAIDTENIDRIVDYKGWLELKKRKW 1262
                ++K V+  ++ +   Q   P   + +Q         E    IV+        ++KW
Sbjct: 1199 ---TKRKRVQLEEEDEEEAQ---PQATTWRQALGAPPPIGETRKTIVE--------RKKW 1244

Query: 1263 KDNLDRRKKQKLGSLRASHQANGVSESLGDMINHKEAQRRTGVGSYFRRQETAMTRCHWQ 1322
            K   D+R++ +  S R   +   V  + G             +G + RR +  +    WQ
Sbjct: 1245 KWQQDQRQRNRQASKRTRGEDPPVVRATGSTAT---------LGGFLRRAQRTLLDQPWQ 1295

Query: 1323 IIQLVPSSQSGVFLAWVVVEGIMVRIPITVPRLFYLN--SKDPIVEKFPGRRVNKTLPHG 1380
            I+QLVP    G F  W ++   + +I +TVPR+FY+N  S  P  E    R+VN+ LP  
Sbjct: 1296 IVQLVPVDDLGHFTVWALIGEELHKIKLTVPRIFYVNQRSAAPPEEGQLWRKVNRVLPRS 1355

Query: 1381 RRSFNLIEVMIDEDQFRKESKKLAALLADPEVE 1413
            R  FNL    + E  FR  S  + A LA P++E
Sbjct: 1356 RPVFNLYRYSVPEQLFRDNSLGMLADLATPDIE 1388



 Score =  207 bits (526), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 132/425 (31%), Positives = 220/425 (51%), Gaps = 28/425 (6%)

Query: 1572 HLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEFRKLGATIIFANFSKVIIDTGKFD 1631
            H YRW+ S ++ L+DP L R L+ +M+K+F  ++AEF++LGATII+A+F+++I+ TGK  
Sbjct: 1693 HFYRWVRSSNALLYDPALRRSLNNLMRKMFLRIIAEFKRLGATIIYADFNRIILSTGKKT 1752

Query: 1632 LSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLFMDQYNYGGIPARADESLDDDSQV 1691
            +S    Y D ++++L+ +E+F  I+L     W+ +L+MDQ N+ GI  +  + +D+ +  
Sbjct: 1753 VSDGLGYVDYIVQSLRNKEMFHSIQLSFEQCWNFMLWMDQANFSGIRGKLPKGIDE-TVS 1811

Query: 1692 DIVSSWNIAEYLPKEIQDHFVLVVSEFM-YIPWKHAQKLAASRASLQEGSSCTPSIT--V 1748
             IVS+  I +    +  +      +E    +    A++      SL+   +    +    
Sbjct: 1812 SIVSTTMIRDSERNQDDEEDEEEDAEIRDSVEGNEAEQDQEDELSLELNWTIGEHLPDEN 1871

Query: 1749 AAAENFESHIVQYVKGEISSYFTGKLLSIVR----DAIHHMKKMNNDQHNSPGVMQTAAN 1804
               E FES +  +++       T + +  +     D I  + K       SPG       
Sbjct: 1872 ECREKFESLLTLFMQSLAEKKTTEQAIKDISHCAFDFILKLHKNYGKGKPSPG------- 1924

Query: 1805 IHKVDAPLEFIKHVCAAFALDQNVQHDVLVMRKNLLKYVRVREFAPEAEFRDPCPSFILP 1864
                   LE I+ +  A ++D+ +   +  +R+N+L+ V + EF+  AE+ DPC S I+ 
Sbjct: 1925 -------LELIRTLIKALSVDKTLAEQINELRRNMLRLVGIGEFSDLAEWEDPCDSHIIN 1977

Query: 1865 NVICSYCNDCRDLDLCRDMALLAQD----WHCAMPQCGQPYDREVMENALLQIVRQRERL 1920
             VIC  CN CRDLDLC+D     +D    W CA  QC   YD E +E  +L  ++++   
Sbjct: 1978 EVICKACNHCRDLDLCKDKHRAMKDGVPVWLCA--QCYVAYDNEEIEMRMLDALQRKMMS 2035

Query: 1921 YHLQDLVCIRCNQVKAAHLAEQCACAGSFRCKEDASDFRSKMQIFLNIANRQGFQLLQEC 1980
            Y LQDL C RC+++K  +LAE C CAG+F       D ++ +  F  +A     QLLQ+ 
Sbjct: 2036 YVLQDLSCSRCSEIKRENLAEFCTCAGNFVPLISGKDIQTLLGTFSKVAANHKMQLLQQT 2095

Query: 1981 TSWIL 1985
                L
Sbjct: 2096 VHQAL 2100


>gi|195158371|ref|XP_002020065.1| GL13784 [Drosophila persimilis]
 gi|194116834|gb|EDW38877.1| GL13784 [Drosophila persimilis]
          Length = 2218

 Score = 1308 bits (3384), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 681/1419 (47%), Positives = 931/1419 (65%), Gaps = 89/1419 (6%)

Query: 25   EELEAKLGYDLFSEGDKRLGWLLTFASSSLEDEDTRKVYSCIDLYFVSQDGSTFKSKYKF 84
            +++++K G+D   +  +R G+L+   ++ + DED R++ + +DL+F+  DGS FK    +
Sbjct: 40   DKIDSKYGFDRVKDSQERTGYLINMHANEVLDED-RRLIAALDLFFIQMDGSRFKCTVAY 98

Query: 85   RPYFYAATKEKMEMDVEAYLRRRYESQIADIEILEKEDLDLKNHLSGLHKSYLKISFDTV 144
            +PY      + M ++V  +L R+Y  QIA +E + KEDLDL NHLSGL ++YLK+SF   
Sbjct: 99   KPYLLVRPDDNMHLEVARFLGRKYSGQIASLEHISKEDLDLPNHLSGLQQNYLKLSFLNQ 158

Query: 145  QQLMDVKKDLLHVVERNQAKFDAAEAYESILTGKREQ-----------RPQDFLDCIVDL 193
              +  V+++L+  V RN  +  +   Y  +L     Q           R QD++DCI+D+
Sbjct: 159  TAMTKVRRELMAAVRRNTERQKSNTYYMQMLATSLAQSSANTEEGLGKRQQDYMDCIMDI 218

Query: 194  REYDVPYHIRFAIDNDVRCGQWYDVSISST--GPLLEKRVDLLQRAEVHVCAFDIETTKL 251
            RE+DVPYH+R +ID  + CG WY++   S    P +  R D+L R E  V AFDIETTKL
Sbjct: 219  REHDVPYHVRVSIDLRIFCGLWYNIRCRSGVEMPHISPRPDILDRPEPVVLAFDIETTKL 278

Query: 252  PLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNVNNEI 311
            PLKFPDA  D IMMISYM+DGQG+LI NRE +  +++D EYTPKPEFEG F V N +NE+
Sbjct: 279  PLKFPDAQTDQIMMISYMIDGQGFLITNREIISSNVDDFEYTPKPEFEGNFVVYNEDNEM 338

Query: 312  ELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDKNQGECRAK 371
            +LL+ +F H+ EV+P I VTYNGD+FDWPF+ETRAA +   M +E+GF   ++ G   ++
Sbjct: 339  QLLQKFFDHIMEVRPHIIVTYNGDFFDWPFVETRAAVYDLDMKQEIGFSKMRD-GIYLSR 397

Query: 372  FACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQMMASYSV 431
             + H+DC  WVKRDSYLP GSQGLKAV KAKL YDP+E++PEDM R A E+PQ++A+YSV
Sbjct: 398  PSIHMDCLCWVKRDSYLPVGSQGLKAVAKAKLRYDPVELDPEDMCRMAVEQPQVLANYSV 457

Query: 432  SDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVICPNKH 491
            SDAVATYYLYM YVHPFIF+L TIIPM PDE+LRKGSGTLCE LL              H
Sbjct: 458  SDAVATYYLYMKYVHPFIFALNTIIPMEPDEILRKGSGTLCETLL--------------H 503

Query: 492  QSDPEKFYRNHLLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQLLNNLDRDLQYA 551
             S P                 HVE LESGVFR+D+P  F+LDP+  +QL+  +D  L++A
Sbjct: 504  GSCP--------WTPRPMSAAHVEALESGVFRADIPCRFRLDPTMVKQLMEQIDGVLRHA 555

Query: 552  IKVEGKMDLESVSNYDEVKNAIMEKLLRLQEEPIREECPLIYHLDVAAMYPNIILTNRLQ 611
            I VE  + +E V N +EVK  I++ L  L + P R E P+IYHLDV AMYPNIILTNRLQ
Sbjct: 556  IVVEEGIPMEQVLNLEEVKQEILQGLQGLHDIPNRLEQPVIYHLDVGAMYPNIILTNRLQ 615

Query: 612  PPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYYHLKKQIESE-FVDGTNG 670
            P ++V+D  C ACDFN+PG  C R ++W+WRGE+    R+++  +++Q+E+E F     G
Sbjct: 616  PSAMVSDLDCAACDFNKPGVRCKRSMDWLWRGEMLPASRNEFQRIQQQLETEKFPSLFPG 675

Query: 671  HLSKSFLDLPKMEQQSRLKDRLKKYCQKAYKRV-LDKPVTELREAGICMRENSFYVDTVR 729
              +++F +L K +Q +  K RL  YC+KAYK+  L K   E R + IC +ENSFYVDTVR
Sbjct: 676  GPTRAFHELSKEDQAAYEKKRLSDYCRKAYKKTKLTK--LETRNSTICQKENSFYVDTVR 733

Query: 730  SFRDRRYEYKGLNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHKCILNSFYGYV 789
            +FRDRRYEYKGL KV K  ++ A ASG++ +I+ A+   VLYDSLQLAHKCILNSFYGYV
Sbjct: 734  AFRDRRYEYKGLTKVAKASVTSAVASGDAAEIKAAKGREVLYDSLQLAHKCILNSFYGYV 793

Query: 790  MRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLPGSFPENFTFK 849
            MR+GARW+SM MAG+V  TG+ II  AR +IE++G+PLELDTDGIWC+LPGSFP+ FT +
Sbjct: 794  MRRGARWHSMPMAGIVCLTGSNIITKAREIIERVGRPLELDTDGIWCILPGSFPQEFTVQ 853

Query: 850  TK-DLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSK-------TYETHSECSIEFE 901
            T  + KKK+ ISYP  +LN  V  + TNDQY  L     K        Y+   E SI FE
Sbjct: 854  TSHEKKKKINISYPNAVLNTMVKDHFTNDQYHELRKNEDKEGEYPAPQYDIRDENSIFFE 913

Query: 902  VDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDK 961
            VDGPY AM+LPA+KEEG  +KKRYAVFN DG+LAELKGFE+KRRGEL+LIK FQ+ +F+ 
Sbjct: 914  VDGPYLAMVLPAAKEEGKKLKKRYAVFNFDGSLAELKGFEVKRRGELQLIKNFQSSVFEA 973

Query: 962  FLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLADYGEQKSC 1021
            FL GST+EECY +VA VA+ WLD+L ++G ++ DSEL + I+E+ +MSK L +YG QKS 
Sbjct: 974  FLAGSTLEECYGSVAKVADYWLDVLYSRGSNLPDSELFELIAENKSMSKKLEEYGAQKST 1033

Query: 1022 AVTTARRLSDFLGDTMVKDKGLRCQYIVACEPQGTPVSERAVPVAIFETDAEIMKFYLRK 1081
            +++TA+RL++FLG+ MVKD GL C+YI++ +P+G PV+ERA+P+AIF+++A + + +LR+
Sbjct: 1034 SISTAKRLAEFLGEQMVKDAGLACKYIISKKPEGAPVTERAIPLAIFQSEASVRRHHLRR 1093

Query: 1082 WCK--TSSDVGIRSIVDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLYKKVR 1139
            W K  T  D  IR ++DW+YY +RL   IQKIITIPAA+Q ++NPVPRV HPDWL+KK+ 
Sbjct: 1094 WLKDNTMGDADIRDVLDWNYYIERLGGTIQKIITIPAALQGLANPVPRVQHPDWLHKKML 1153

Query: 1140 EKEDKFRQRKLVDIFSSLKKDDFLNKTCNAETNLMDENVE--DLEDFPKKRRNSVNGPRP 1197
            EK D  +QR++ +IF+S  K          +  L D+ +E  D+ED   K      G   
Sbjct: 1154 EKNDVLKQRRINEIFTSRPK---------PKPALEDKQLELRDMEDLAGKEIEDPTGLPM 1204

Query: 1198 IVRCFEVNNEQKTVKTTDQVDSLRQQL-EPSEVSDQQPSSQNAIDTENIDRIVDYKGWLE 1256
            + +   V  E+   + T Q  + RQ L  P  + D + +            IV+   W+ 
Sbjct: 1205 VTKRKRVQLEEGEEEETPQATTWRQALGAPPAIGDTRKT------------IVE---WVR 1249

Query: 1257 LKKRKWKDNLDRRKKQKLGSLRASHQANGVSESLGDMINHKEAQRRTGVGSYFRRQETAM 1316
             +K+KWK   ++R++ +  S R  ++   +  + G             +G + RR +  +
Sbjct: 1250 FQKKKWKWQQEQRQRSRQASKRVRNEEAPIPRAPGAT---------ATLGGFLRRAQRTL 1300

Query: 1317 TRCHWQIIQLVPSSQSGVFLAWVVVEGIMVRIPITVPRLFYLN--SKDPIVEKFPGRRVN 1374
                WQI+QLVP    G F  W ++   + RI +TVPR+FY+N  S  P  E    R+VN
Sbjct: 1301 LDQPWQILQLVPVDDLGHFTVWALIGEELHRIKLTVPRIFYVNQRSAAPPEEGQLWRKVN 1360

Query: 1375 KTLPHGRRSFNLIEVMIDEDQFRKESKKLAALLADPEVE 1413
            + LP  R  FNL    + E  FR  S  + A LA P++E
Sbjct: 1361 RVLPRSRPMFNLYRYSVPEQLFRDNSLGMLADLATPDIE 1399



 Score =  268 bits (685), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 177/578 (30%), Positives = 287/578 (49%), Gaps = 72/578 (12%)

Query: 1442 LARYAHILWISDDGVPDLGGTSEEDECFADEVHQP---VLTYPGAYRKVSVELKIHHLSV 1498
            L R+  +LW S    PDLGG   +D     E  +    V    G Y  V VEL +  L+V
Sbjct: 1663 LQRHNFVLWWSASTRPDLGGREADDSRLLAEFEENISVVQNKAGFYPDVCVELALDSLAV 1722

Query: 1499 NALLKSNQVNEMEGGG-LFGFD-------QDMNSGPYNNELCGFDETTSSAPAFRVVKQL 1550
            +ALL+SN++ EMEG      FD       ++M        L  +DET   + AFRV++ +
Sbjct: 1723 SALLQSNKIQEMEGASSAITFDVMPQASLEEMIGTVPAATLPSYDETALCSAAFRVMRSM 1782

Query: 1551 IQRCLTDAVTSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEFRK 1610
            +   L +   + N+F+D  + H YRW+ S ++ L+DP L R L+ +M+K+F  ++AEF++
Sbjct: 1783 VNGWLREVSINRNIFSDFQIVHFYRWVRSSNALLYDPALRRSLNNLMRKMFLRIIAEFKR 1842

Query: 1611 LGATIIFANFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLFMD 1670
            LGATI++A+F+++I+ +GK  +S A  Y D ++++L+ +E+F  I+L     W+ +L++D
Sbjct: 1843 LGATIVYADFNRIILSSGKKTVSDALGYVDYIVQSLRNKEMFHSIQLSFEQCWNFMLWLD 1902

Query: 1671 QYNYGGIPARADESLDDDSQVDIVSS--------------------WNIAEYLPKEIQDH 1710
            Q N+ GI  +  + + D++   IVS+                           P    D 
Sbjct: 1903 QANFSGIRGKLPKGI-DETVSSIVSTTMRQERDRNREEDDDDDDDDDEEENRDPSANADQ 1961

Query: 1711 FVLVVSEF-MYIPWKHAQKLAASRASLQEGSSCTPSITVAAAENFESHIVQYVKGEISSY 1769
                  E  + + W   ++L        E + C         E FES I  +++      
Sbjct: 1962 EPEAEDELALELNWTIGERLP-------EENECR--------EKFESLITLFMQSLAERK 2006

Query: 1770 FTGKLLSIVR----DAIHHMKKMNNDQHNSPGVMQTAANIHKVDAPLEFIKHVCAAFALD 1825
             T + +  +     D I  + K       SPG              LE I+ +    ++D
Sbjct: 2007 TTEQAIRDISHCAFDFILKLHKNYGKGKPSPG--------------LELIRTMIKVLSVD 2052

Query: 1826 QNVQHDVLVMRKNLLKYVRVREFAPEAEFRDPCPSFILPNVICSYCNDCRDLDLCRDMAL 1885
            + +   +  +R+N+L+ V + EF+  AE++DPC S+I+  VIC  CN CRDLDLC+D   
Sbjct: 2053 KTLAEQINELRRNMLRLVGIGEFSDMAEWQDPCDSYIINEVICKACNHCRDLDLCKDKHR 2112

Query: 1886 LAQD----WHCAMPQCGQPYDREVMENALLQIVRQRERLYHLQDLVCIRCNQVKAAHLAE 1941
              +D    W CA  QC   YD E +E  +L  ++++   + LQDL C RCN++K  +LAE
Sbjct: 2113 AMKDGIPVWLCA--QCYVAYDNEEIEMRMLDALQRKMMSFVLQDLRCARCNEIKRENLAE 2170

Query: 1942 QCACAGSFRCKEDASDFRSKMQIFLNIANRQGFQLLQE 1979
             C CAG+F       D ++ +Q F  +A     QLLQ+
Sbjct: 2171 FCTCAGNFVPLISGKDIQTLLQTFSKVATNHKMQLLQQ 2208


>gi|241958982|ref|XP_002422210.1| DNA polymerase epsilon, catalytic subunit, putative [Candida
            dubliniensis CD36]
 gi|223645555|emb|CAX40214.1| DNA polymerase epsilon, catalytic subunit, putative [Candida
            dubliniensis CD36]
          Length = 2211

 Score = 1305 bits (3378), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 670/1408 (47%), Positives = 924/1408 (65%), Gaps = 74/1408 (5%)

Query: 25   EELEAKLGYDLFSEGDK-----RLGWLLTFASSSLEDEDTRKVYSCIDLYFVSQDGSTFK 79
            + +++ +G+D    G+      R GWL+   ++++  +D    YS +D YF+ ++G +FK
Sbjct: 69   DHIDSIMGFDRLEHGENDGNKPRKGWLINMHATTIPTDDYLTGYSGVDYYFLDEEGGSFK 128

Query: 80   SKYKFRPYFYA-ATKEKMEMDVEAYLRRRYES-QIADIEILEKEDLDLKNHLSGLHKSYL 137
            +  +F PYF+        E +VE ++R+  ES  +     + KEDL L NHL GL K+ +
Sbjct: 129  ATLQFDPYFFVDVLPGDHESEVEEWMRKYLESANVKGFGRVIKEDLKLPNHLLGLKKTLI 188

Query: 138  KISFDTVQQLMDVKKDLLHVVERNQAKFDAAEAYESILTGKREQRPQDFLDCIVDLREYD 197
            K+SF  +Q L+  ++ L  +++ NQ K ++   Y    T K  +   D    I D+REYD
Sbjct: 189  KLSFHNIQDLLAARRLLSPIIKDNQLKRESRNMY----TFKEIETIMDPSVYIDDIREYD 244

Query: 198  VPYHIRFAIDNDVRCGQWYDVSISSTGPLLEKRVDLLQRAEVHVCAFDIETTKLPLKFPD 257
            VPYH+R +ID +VR G+WYDV    +     +  + +  A+  V AFDIETTK PLKFPD
Sbjct: 245  VPYHVRVSIDKNVRVGKWYDVYAKHSKVEFVEDKEKIAFADPVVLAFDIETTKAPLKFPD 304

Query: 258  ADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNVNNEIELLRLW 317
            A  D IMMISYM+DG+G+LI NRE + EDI+D EYTPKPE+ G F + N  +E   L+ +
Sbjct: 305  AKIDQIMMISYMIDGEGFLITNREIISEDIDDFEYTPKPEYPGMFTIFNEPDEKHALKRF 364

Query: 318  FAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDKNQGECRAKFACHLD 377
            F H+++VKP +  T+NGD+FDWPF+E R   H   M EE+GF  D N+GE ++K+  H+D
Sbjct: 365  FEHIRDVKPTVIATFNGDFFDWPFVENRTRFHDMDMFEEIGFAKD-NEGEYKSKYCVHMD 423

Query: 378  CFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQMMASYSVSDAVAT 437
            CF WVKRDSYLPQGSQGLKAVT AKLGY+P E++PE M  +A +KPQ+++ YSVSDAVAT
Sbjct: 424  CFRWVKRDSYLPQGSQGLKAVTTAKLGYNPTELDPELMTPYAYDKPQLLSEYSVSDAVAT 483

Query: 438  YYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVICPNKHQSDPEK 497
            YYLY  YVHPFIFSL TIIP++PDEVLRKG+GTLCEMLL VQAY+ N++ PNKH    E+
Sbjct: 484  YYLYYKYVHPFIFSLCTIIPLNPDEVLRKGTGTLCEMLLSVQAYEGNILLPNKHSDPIER 543

Query: 498  FYRNHLLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQLLNNLDRDLQYAIKVEGK 557
            FY  HLLESETY+GGHVE LE+GVFRSD+PT FK+DPSA ++LL NL   +++ I+VE  
Sbjct: 544  FYDGHLLESETYVGGHVESLEAGVFRSDIPTHFKIDPSAIDELLGNLHNSIKFCIEVENG 603

Query: 558  MDLESVSNYDEVKNAIMEKLLRLQEEPIREECPLIYHLDVAAMYPNIILTNRLQPPSIVT 617
              +E V N+DE+ + I   LL L+  P REE PLIYH+DVA+MYPNI+ +NRLQP S+ +
Sbjct: 604  KKMEDVDNFDEIYSRIESSLLELKNNPSREEKPLIYHVDVASMYPNIMTSNRLQPDSMKS 663

Query: 618  DEVCTACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYYHLKKQIESEFVDGTNGHL-SKSF 676
            +E C ACDFNRPGK C R+L W WRGE +  + ++Y  +K+ +++E   G    L  ++F
Sbjct: 664  EEDCAACDFNRPGKNCDRRLPWAWRGEYYPAEMNEYNMIKRTLQNETFPGARPWLPPRTF 723

Query: 677  LDLPKMEQQSRLKDRLKKYCQKAYKRVLDKPVTELREAGICMRENSFYVDTVRSFRDRRY 736
             +L   EQ +++K R+  Y +K Y RV    V   REA IC REN FYVDTVRSFRDRRY
Sbjct: 724  DELSYAEQAAKIKKRISDYSRKVYHRVKSSKVVT-REAIICQRENPFYVDTVRSFRDRRY 782

Query: 737  EYKGLNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHKCILNSFYGYVMRKGARW 796
            E+KGL KVWKGK+ +  A+ ++I   EA+ MVVLYDSLQLAHK ILNSFYGYVMRKG+RW
Sbjct: 783  EFKGLAKVWKGKVGKI-AANDTIAKDEAKKMVVLYDSLQLAHKVILNSFYGYVMRKGSRW 841

Query: 797  YSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLPGSFPENFTFKTKDLKKK 856
            YSMEMAGV   TGA IIQ AR L+E+IG+PLELDTDGIWC+LP SFPENF  K KD  KK
Sbjct: 842  YSMEMAGVTCLTGATIIQMARALVERIGRPLELDTDGIWCILPKSFPENFNLKCKD-GKK 900

Query: 857  LTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEFEVDGPYKAMILPASKE 916
            + + YPC MLN  V    TN QYQ LVDP +  Y+T S+ SI FEVDGPYKAMILP SKE
Sbjct: 901  IFLEYPCSMLNYLVHEKFTNHQYQDLVDPDTFKYKTRSDNSIFFEVDGPYKAMILPTSKE 960

Query: 917  EGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFLHGSTIEECYSAVA 976
            EG  +KKRYAVFN+DG+LAELKGFE+KRRGEL+LIK FQ+++F  FL G T++ CY AVA
Sbjct: 961  EGKGLKKRYAVFNEDGSLAELKGFELKRRGELQLIKNFQSDIFKLFLEGDTLDTCYQAVA 1020

Query: 977  AVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLADYGEQKSCAVTTARRLSDFLGDT 1036
             VAN WLD+LD +G  + D +LI+ I E+ +MSKSLA+YG+QKS ++TTA+RL +FLG+ 
Sbjct: 1021 TVANNWLDVLDTKGGMLEDEDLIELICENRSMSKSLAEYGDQKSTSITTAKRLGEFLGEE 1080

Query: 1037 MVKDKGLRCQYIVACEPQGTPVSERAVPVAIFETDAEIMKFYLRKWCKTSS--DVGIRSI 1094
            MVKD GL  +YI++ +P G+PV+ERA+PV+IF +D +  + +L+KW K  S      R +
Sbjct: 1081 MVKDAGLATKYIISAKPIGSPVTERAIPVSIFSSDKK--EIFLKKWLKDPSLNKFSPRDV 1138

Query: 1095 VDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLYKKVREKEDKFRQRKLVDIF 1154
            +DW+YY +RL+S +QKIITIPAA+Q V NPVPRV HPDWL +KV+  ED  +Q+ + + F
Sbjct: 1139 IDWNYYYERLASVVQKIITIPAALQNVKNPVPRVPHPDWLQRKVKSSEDTMQQKSISNFF 1198

Query: 1155 SSLKKDDFLNKTCNAETNLMDENVEDLEDFPKKRRNSVNGPRPIVRCFEVNNEQKTVKTT 1214
                K++                ++D+EDF       V+   P  +  +V + ++     
Sbjct: 1199 KQTTKENI--------------KLKDIEDF-----GEVDASVPKGKVVKVTSRKRKSGKA 1239

Query: 1215 DQVDSLRQQLEPSEVSDQQPSSQNAIDTENIDRIVDYKGWLELKKRKWK-DNLDRRKKQK 1273
            + VD           +++   +Q  ++        DY+G+L+ +K KWK     R ++++
Sbjct: 1240 NIVDD----------AEEDEKNQAILNGPCPSMTEDYQGFLQYQKAKWKVQQAGRERRRR 1289

Query: 1274 LGSLRASHQANGVSESLGDMINHKEAQRRTGVGSYFRRQETAMTRCHWQIIQL-VPSSQS 1332
            L                     + E+ +R+ VG  FR++   +   +W+I++  + S++ 
Sbjct: 1290 LFG------------------TNSESSQRSTVGGMFRKRAENIAGSNWEILEYKLDSTKP 1331

Query: 1333 GVFLAWVVVEGIMVRIPITVPRLFYLNSKDPIVEK--FPGRRV---NKTLPHGRRSFNLI 1387
            G    +V     +      VP+  Y + K  + ++   PG  +   N  LP+G    NL 
Sbjct: 1332 GDLKVYVRASDKVHTFTFHVPKKVYASFKTKLSQRKSIPGCEIEESNAILPNGHDGTNLY 1391

Query: 1388 EVMIDEDQFRKESKKLAALLADPEVEVL 1415
            ++ + +  F+++   + +LL D  +  L
Sbjct: 1392 KLTMAQSVFQEQMSDVDSLLQDSNIRGL 1419



 Score =  254 bits (648), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 180/672 (26%), Positives = 313/672 (46%), Gaps = 91/672 (13%)

Query: 1364 IVEKFPGRRVNKTL-----PHGRRSFNLIEVMIDEDQFRKESKKLAALLADPEVEVLGWQ 1418
            ++ K    R NK       P+  R  N++    D    +    +L+       +  +GWQ
Sbjct: 1567 VIGKIHESRSNKAFLAIQSPYSSRILNVLNTTEDFPTIKMNISELS-------LPAVGWQ 1619

Query: 1419 QNAAKIGMQRCAASSQWFNERISLARYAHI----------------------------LW 1450
               +K  +        W     + A+YA+I                            LW
Sbjct: 1620 SLISKRVINHYFVLGSWIKNLTAFAKYANIPLCNLQIENIGFLVDIEYARRLSENNIVLW 1679

Query: 1451 ISDDGVPDLGGTSEEDECFADEVHQPVLTYPGAYRKVSVELKIHHLSVNALLKSNQVNEM 1510
             S + +PDLGG   +     D +  P +  P  Y    +E++I  L++N +L S  +NE 
Sbjct: 1680 WSPNPLPDLGGFEMDRMIDFDSLAFPTINNPEIYETACLEVEIGTLTINTILTSALINEA 1739

Query: 1511 EGGGLFGFDQDMNSGPYNNELCGFDETTSSAPAFRVVKQLIQRCLTDAVTSGNVFADAIL 1570
            EG  L   D++M+    NN    F E + S+PA  +++ +++    DA+ + NV AD+I+
Sbjct: 1740 EGTDLA--DENMHFDK-NNGASTFAEDSFSSPALSILRSMVKDWWDDALRN-NVNADSIM 1795

Query: 1571 QHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEFRKLGATIIFANFSKVIIDTGKF 1630
              L  W+    S L+DP LH  +H +  K    L++EF+++GA +IFAN +K++I T K 
Sbjct: 1796 NTLVTWVQRNDSMLYDPSLHYHVHNLTSKALLQLISEFKRMGAQVIFANRNKLLIQTSKI 1855

Query: 1631 DLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLFMDQYNYGGIPARADESLDDDSQ 1690
             +  + AY   +LKA +++ LF +++L  V +W  L++MD++NYGG   R+   + ++  
Sbjct: 1856 SVENSYAYGQYILKAARSKPLFNFLDLRIVKYWDILIWMDEFNYGG---RSCTEIVNEEM 1912

Query: 1691 VDIV--SSWNIAEYLPKEIQDHFVLVVSEFMYIPWKHAQKLAASRASLQEGSSCTPSITV 1748
             ++V  + W++ ++LP   Q+ F     +++ I      K        +   + TP +T 
Sbjct: 1913 QNLVPENHWHLQKFLPIIFQNEF----EDWLVIFLDALSKYKNENLLGKGVQANTPRVT- 1967

Query: 1749 AAAENFESHIVQYVKGE-----------------ISSYFTGKLLSIVRDAIHHMKKMNND 1791
                     IV  +KG+                 I ++    L  I +     ++ + N 
Sbjct: 1968 --------QIVHILKGQKKLQAQEVEEEEVDHGVIETFKKPILRRIEKLYRRQLEAILNP 2019

Query: 1792 QHNSPGVMQTAAN--IHKVDAPLEFIKHVCAAFALDQNVQHDVLVMRKNLLKYVRVREFA 1849
            +        T A   +H  +  LE +K +C  FAL +    +V +++K LL    VR+F+
Sbjct: 2020 EFKQEYEFPTLAGSYLHMKNPALELVKFLCHVFALSEKRSKEVRILKKELLLIFDVRDFS 2079

Query: 1850 PEAEFRDPCPSFILPNVICSYCNDCRDLDLCRDMALLAQDWHCAMPQCGQPYDREVMENA 1909
             +A FRDPC S  LP+VIC YCN  RD+DLCR+  +    W+C    C + Y++  +E  
Sbjct: 2080 KDATFRDPCTSLKLPHVICDYCNHIRDIDLCREEEI--NIWNCL--NCHKAYNKIALEE- 2134

Query: 1910 LLQIVRQRERL---YHLQDLVCIRCNQVKAAHLAEQCACAGSFRCKEDASDFRSKMQIFL 1966
              +I+ Q  +L   ++ QDL C +CNQ++  ++   C C+G++           + Q F+
Sbjct: 2135 --EIINQFNKLFVKFYGQDLKCNKCNQIRQNNMDLHCKCSGNWVETIGYHIVEKQFQTFV 2192

Query: 1967 NIANRQGFQLLQ 1978
            N+A     QLL 
Sbjct: 2193 NVAKFYNLQLLN 2204


>gi|157132081|ref|XP_001662453.1| DNA polymerase epsilon, catalytic subunit [Aedes aegypti]
 gi|108881738|gb|EAT45963.1| AAEL002800-PA [Aedes aegypti]
          Length = 2186

 Score = 1305 bits (3378), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 675/1436 (47%), Positives = 950/1436 (66%), Gaps = 68/1436 (4%)

Query: 7    DRQDGRRTKKQKLIRSAE-EELEAKLGYDLFSEGDKRLGWLLTFASSSLEDEDTRKVYSC 65
            D+ +G  T +    +S E ++++ K GYD   +  +R G+L+   S+ L + D R++ + 
Sbjct: 14   DKAEGDDTNEIGYRQSKENDKIDLKYGYDRVKDTQERTGYLVNMHSTELLNAD-RRLVAA 72

Query: 66   IDLYFVSQDGSTFKSKYKFRPYFYAATKEKMEMDVEAYLRRRYESQIADIEILEKEDLDL 125
            +DLYF+  DG+ +K    + PY    TKE   ++V  +L R+YE Q+  +E ++KEDLDL
Sbjct: 73   LDLYFLQMDGTRYKMSVIYAPYLLLITKEGHALEVAKFLSRKYEGQLQKVEHIQKEDLDL 132

Query: 126  KNHLSGLHKSYLKISFDTVQQLMDVKKDLLHVVERNQAKFDAAEAY----ESILTGKREQ 181
             NHLSGL ++ LK++F  +  +  VKKDL   V +N+ +  +   Y     S LT   E 
Sbjct: 133  PNHLSGLKQNLLKLTFANISHMNKVKKDLSAAVRKNKERDKSNTLYMQMLSSALTVSSEG 192

Query: 182  RPQ-------DFLDCIVDLREYDVPYHIRFAIDNDVRCGQWYDVSISSTG----PLLEKR 230
              Q       DF + I+D+RE+DVPYH+R +ID ++ CG WY  ++   G    P++  R
Sbjct: 193  EGQSASVQNTDFYESIMDMREHDVPYHVRVSIDLNIFCGLWY--TMRGRGDDEPPIITPR 250

Query: 231  VDLLQRAEVHVCAFDIETTKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDL 290
             D+L R E  V AFDIETTKLPLKFPDA  D IMMISYM+DGQGYLI NRE +  ++ED 
Sbjct: 251  PDILDRPEPVVLAFDIETTKLPLKFPDAQTDQIMMISYMIDGQGYLITNREIISAEVEDF 310

Query: 291  EYTPKPEFEGYFKVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHG 350
            EYTPKPEFEG F V N  +E+ L++ +F H+ +VKP I+VTYNGD+FDWPF+E RAA + 
Sbjct: 311  EYTPKPEFEGQFIVFNELSEMALIQKFFDHILDVKPHIFVTYNGDFFDWPFVEARAAVYD 370

Query: 351  FKMSEELGF-QCDKNQGECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLE 409
              M  E+GF + ++  G    + A H+DC  WVKRDSYLP GSQGLKAV K+KL YDP+E
Sbjct: 371  LDMKREIGFSKVNQRDGNYLCRPAMHMDCLCWVKRDSYLPVGSQGLKAVAKSKLRYDPVE 430

Query: 410  VNPEDMVRFAKEKPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSG 469
            ++PE+M + A E+PQ++++YSVSDAVATYYLYM YVHPFIF+LATIIPM PDE+LRKGSG
Sbjct: 431  LDPEEMCKMAVEQPQVLSNYSVSDAVATYYLYMKYVHPFIFALATIIPMEPDEILRKGSG 490

Query: 470  TLCEMLLMVQAYKANVICPNKHQSDPEKFYRN-HLLESETYIGGHVECLESGVFRSDLPT 528
            TLCE LLM +A+ A ++ PNK  S+  K   + H+L+ ETY+GGHVE LESGVFR+D+ T
Sbjct: 491  TLCESLLMKEAFHAQIVYPNKQVSELNKLTPDGHVLDMETYVGGHVEALESGVFRADIST 550

Query: 529  SFKLDPSAYEQLLNNLDRDLQYAIKVEGKMDLESVSNYDEVKNAIMEKLLRLQEEPIREE 588
             F+LD     QL +N+D+ L++AI  E  + L+ V+N +EV   I   L +L + P R E
Sbjct: 551  RFRLDQDMLMQLHDNVDKVLEHAIVTEEGVPLDQVTNLEEVAEQIRAALQQLHDAPTRIE 610

Query: 589  CPLIYHLDVAAMYPNIILTNRLQPPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEIFMG 648
             P+IYHLDV AMYPNIILTNRLQP S++++  C ACDFN+P   C R +EW+WRGE+   
Sbjct: 611  QPVIYHLDVGAMYPNIILTNRLQPSSMISETDCAACDFNKPDAKCKRNMEWMWRGEMLPA 670

Query: 649  KRSDYYHLKKQIESE-FVDGTNGHLSKSFLDLPKMEQQSRLKDRLKKYCQKAYKRVLDKP 707
             R+++  +++Q+E+E F     G   ++F +L K +Q +  K RL  YC+KAYK+     
Sbjct: 671  SRNEFQRIQQQLETEKFPPLFPGGPMRAFHELSKEDQANYEKKRLADYCRKAYKKTKITK 730

Query: 708  VTELREAGICMRENSFYVDTVRSFRDRRYEYKGLNKVWKGKLSEAKASGNSIKIQEAQDM 767
            + E R + IC +ENSFYVDTVR+FRDRRYEYK L KV K  ++ A  SG++ +I+ A+  
Sbjct: 731  L-ETRTSTICQKENSFYVDTVRAFRDRRYEYKALTKVAKAAVASALKSGDAGEIKAAKGR 789

Query: 768  VVLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPL 827
             VLYDSLQLAHKCILNSFYGYVMRKGARW+SM MAG+V  TGA II  AR +IE++G+PL
Sbjct: 790  EVLYDSLQLAHKCILNSFYGYVMRKGARWHSMSMAGIVCLTGANIITKAREIIERVGRPL 849

Query: 828  ELDTDGIWCVLPGSFPENFTFKTKDLKKK-LTISYPCVMLNVDVARNNTNDQYQTLVDPV 886
            ELDTDGIWC+LP SFP+ FT  T   KKK + +SYP  +LN  V  + TNDQY  L  P 
Sbjct: 850  ELDTDGIWCILPASFPQEFTVLTNHAKKKKINVSYPNAVLNTMVKDHFTNDQYHVLEKPY 909

Query: 887  S----KTYETHSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEI 942
                   Y    E SI FEVDGPY AM+LPA+KEEG  +KKRYAVFN DG+LAELKGFE+
Sbjct: 910  EPGSPAVYSIKPENSIFFEVDGPYLAMVLPAAKEEGKKLKKRYAVFNFDGSLAELKGFEV 969

Query: 943  KRRGELKLIKVFQAELFDKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYI 1002
            KRRGEL+LIK+FQ+ +F+ FL GST+E+CY++VA +A+ WLD+L ++G ++ DSEL + I
Sbjct: 970  KRRGELQLIKIFQSSVFEAFLQGSTLEQCYASVAKIADYWLDVLYSKGHNMPDSELFELI 1029

Query: 1003 SESSTMSKSLADYGEQKSCAVTTARRLSDFLGDTMVKDKGLRCQYIVACEPQGTPVSERA 1062
            SE+ +MS+ L DYGEQKS +++TA+RL++FLGD MVKD GL C+++++ +P G PV+ERA
Sbjct: 1030 SENRSMSRKLEDYGEQKSTSISTAKRLAEFLGDQMVKDAGLACKFVISKKPDGAPVTERA 1089

Query: 1063 VPVAIFETDAEIMKFYLRKWCKTSS--DVGIRSIVDWSYYKQRLSSAIQKIITIPAAMQK 1120
            +P+AIF+++  I + YLRKW K S+  D  IR ++DW YY +RL   IQKIITIPAA+Q 
Sbjct: 1090 IPLAIFQSEPSIRRHYLRKWLKDSTMGDADIRDVLDWQYYIERLGGTIQKIITIPAALQG 1149

Query: 1121 VSNPVPRVVHPDWLYKKVREKEDKFRQRKLVDIFSSLKKDDFLNKTCNAETNLMDENVED 1180
            ++NPVPRV HP+WL+KK+ EK D  +QR++ ++F+  +K                  ++D
Sbjct: 1150 LNNPVPRVQHPEWLHKKMLEKNDTLKQRRISEMFTVKEK----------------PAMKD 1193

Query: 1181 LEDFPKKRRNSVNGPR-PIVRCFEVNNEQKTVKTTDQVDSLRQQLEPSEVSDQQPSSQNA 1239
            +ED  + +R+   GP  PI      N++++   + ++ ++  +     E     P     
Sbjct: 1194 IEDLGRSQRSPSVGPNVPI-----ANSKRRRTPSVEEPEATPEAKTWREALGSPPPIG-- 1246

Query: 1240 IDTENIDRIVDYKGWLELKKRKWKDNLDRRKKQKLGSLRASHQANGVSESLGDMINHKEA 1299
             DT+      + + WL   K+KWK  L +R K +    + +      S S+   ++++ A
Sbjct: 1247 -DTKQ-----ELQAWLAFHKKKWKWQLAQRAKYRHTGNKRARTDEAPSSSI---VSNRPA 1297

Query: 1300 QRRTGVGSYFRRQETAMTRCHWQIIQLVPSSQSGVFLAWVVVEGIMVRIPITVPRLFYLN 1359
                 +G + R+ + ++    W ++Q+VPS + G F+ W +V   + +I + +PR+FY+N
Sbjct: 1298 ---ATLGGFLRKTQRSLIEQTWNVLQIVPSDEMGNFVVWAMVGEELHKIKLVIPRIFYVN 1354

Query: 1360 SK--DPIVEKFPGRRVNKTLPHGRRSFNLIEVMIDEDQFRKESKKLAALLADPEVE 1413
             +   P  E    ++V++ LP  R    L + ++ E  FR  S  L A LA P++E
Sbjct: 1355 QRWPAPPEEGALWKKVHRVLPRARPVHQLYQYVVPEQIFRDNSLGLLADLATPDIE 1410



 Score =  275 bits (703), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 190/576 (32%), Positives = 292/576 (50%), Gaps = 90/576 (15%)

Query: 1442 LARYAHILWISDDGVPDLGGTSEEDECFADEVH---QPVLTYPGAYRKVSVELKIHHLSV 1498
            L ++  +LW S +  PDLGG   +D     E       V    G Y  V VEL I  L+V
Sbjct: 1672 LQKHNFVLWCSPNSRPDLGGREADDSRLLAEFEDNISVVQNRQGFYGDVCVELTIDSLAV 1731

Query: 1499 NALLKSNQVNEMEGGG-LFGFD-------QDM--NSGPYNNELCGFDETTSSAPAFRVVK 1548
            +ALL++++V EMEG      FD        DM  N G     L  +DET   + AFRV++
Sbjct: 1732 SALLQASRVQEMEGAASAITFDVIPQASLDDMIANQG---QTLPSYDETALCSQAFRVMR 1788

Query: 1549 QLIQRCLTDAVTSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEF 1608
             ++   L D   + N FAD  + H YRW+ S  + L+DP + R L+ +M+K+F  +++EF
Sbjct: 1789 SMVNGWLRDVSLNKNAFADFQIIHFYRWVRSSRALLYDPAIRRALNTLMRKLFLQMISEF 1848

Query: 1609 RKLGATIIFANFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLF 1668
            ++L A II+A+F++++I+TGK  +S A AY D ++++++ +ELF  I +     W  LL+
Sbjct: 1849 QRLKAEIIYADFNRIVINTGKKTVSDAIAYTDYVVQSIRNKELFHSISISYRRAWEFLLW 1908

Query: 1669 MDQYNYGGIPA---------RADESLDDDSQVDIVSSWNIAEYLPKEI--QDHFVLVVSE 1717
            +D  NY GI A         +   S +  + ++I  SWNIAE LP+E   ++HF   +  
Sbjct: 1909 IDAANYSGISAPKRLNADGTQCTASAEQATHLEI--SWNIAENLPEEARCREHFDGFMIA 1966

Query: 1718 FMYIPWKHAQKLAASRASLQEGSSCTPSITVAAAENFESHIVQYVKGEISSYFTGKLLSI 1777
            FM       +KL             T  ++ A A    SH+                   
Sbjct: 1967 FM-------EKL-------------TQGVSPAKALKLLSHM------------------- 1987

Query: 1778 VRDAIHHMKKMNNDQHNSPGVMQTAANIHKVDAP-LEFIKHVCAAFALDQNVQHDVLVMR 1836
               A   ++KM    H + G          ++ P LEFIK VC   A+++++  ++  +R
Sbjct: 1988 ---AFGKVQKM----HKNYG--------RGMEGPALEFIKAVCKVLAVNKDIDEELTSLR 2032

Query: 1837 KNLLKYVRVREFAPEAEFRDPCPSFILPNVICSYCNDCRDLDLCRDMALLAQD----WHC 1892
            +N+L+ V + +F+ +A +R+P  S++L  VIC  CN CRD+DL +D     Q+    W C
Sbjct: 2033 RNMLQLVGIGDFSDKAVWREPQKSYVLSEVICKACNQCRDVDLRKDGHRAMQNGALVWMC 2092

Query: 1893 AMPQCGQPYDREVMENALLQIVRQRERLYHLQDLVCIRCNQVKAAHLAEQCACAGSFRCK 1952
            A  QC   YD   +E  LL++V ++   Y LQDL C RC Q+K  +LAE CACAGSF   
Sbjct: 2093 A--QCNLDYDTVDIEMRLLEVVERKMMSYTLQDLRCSRCKQIKRENLAEFCACAGSFENL 2150

Query: 1953 EDASDFRSKMQIFLNIANRQGFQLLQECTSWILEVQ 1988
              A + R  +  FL +A      LL+E    +L   
Sbjct: 2151 ISAGELRRLLGSFLTVAEDCKMALLKETVEQLLNTH 2186


>gi|328772524|gb|EGF82562.1| hypothetical protein BATDEDRAFT_86709 [Batrachochytrium dendrobatidis
            JAM81]
          Length = 2300

 Score = 1305 bits (3378), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 683/1452 (47%), Positives = 917/1452 (63%), Gaps = 136/1452 (9%)

Query: 25   EELEAKLGYDLFSEGDKRLGWLLTFASSSLEDEDTRKVYSCIDLYFVSQDGSTFKSKYKF 84
            ++L+ K+G+  F EG ++LGWL+    +++ D +     + +D+YF+ +DG TFK+   +
Sbjct: 77   DDLDEKMGFARFREGPEKLGWLVNIQPTTIADSECPTGKAGLDMYFIEEDGMTFKATLLY 136

Query: 85   RPYFYAATKEKMEMDVEAYLRRRYESQIADIEILEKEDLDLKNHLSGLHKSYLKISFDTV 144
             PYF+   K   E DVE Y++RR++  +  I  + K+DL L NHL    +S LK+SF  V
Sbjct: 137  EPYFFVICKPGTETDVEEYIKRRFQRNLLSICRVVKQDLTLANHLVSQQRSLLKLSFWNV 196

Query: 145  QQLMDVKKDLLHVVERNQAKFDAAEAYESILTGKREQRPQDFLD---------------- 188
             QL  VK  L  V+E+              LTG++     +FLD                
Sbjct: 197  HQLKTVKNGLFQVIEKRHG-----------LTGRKGFHNDEFLDEVYSTSGGLSNAQGTT 245

Query: 189  -C---------IVDLREYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLLEKRVDLLQRAE 238
             C         I++LREYD+ Y+ R AID  VR G WY VS ++    +  R ++L RAE
Sbjct: 246  TCRGLNVGEDGILELREYDIMYYTRVAIDCQVRIGLWYAVSAAAGKITVTSRPEMLHRAE 305

Query: 239  VHVCAFDIETTKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEF 298
              + AFDIETTKLPLKFPD+  D IMMISYM+DGQG+LI+NRE V +DI+D EYTPKPE+
Sbjct: 306  PVILAFDIETTKLPLKFPDSQIDSIMMISYMIDGQGFLIVNREIVSKDIDDFEYTPKPEY 365

Query: 299  EGYFKVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELG 358
            +G F          LL  +  H+Q  +P ++VTYNGD+FDWPF+E R   H   +  E+G
Sbjct: 366  QGNFA--------SLLGRFIEHIQVSRPTVFVTYNGDFFDWPFVEDRCKVHNIDLFMEIG 417

Query: 359  FQCDKNQGECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRF 418
            F  D + GE +++ A H+DCFAWVKRDSYLPQGSQGLKAVT  KLGY+P+E++PEDM RF
Sbjct: 418  FSKD-SSGEYKSRTAIHMDCFAWVKRDSYLPQGSQGLKAVTTHKLGYNPMEIDPEDMTRF 476

Query: 419  AKEKPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLM- 477
            A ++PQ++A YSVSDAVATYYLYM YV+PFIFSL TIIPM+PD+VLR+GSGTLCE LLM 
Sbjct: 477  AADQPQVLAQYSVSDAVATYYLYMKYVNPFIFSLCTIIPMNPDDVLRRGSGTLCEHLLMA 536

Query: 478  ------VQAYKANVICPNKHQSDPEKFYRNHLLESETYIGGHVECLESGVFRSDLPTSFK 531
                  V+A KANV+ PNKH     K +  HLLESETY+GGHVE LE+GVFRSD+PT+F 
Sbjct: 537  SCSTKTVEAVKANVVMPNKHSEKGGKLFEGHLLESETYVGGHVEALEAGVFRSDIPTNFS 596

Query: 532  LDPSAYEQLLNNLDRDLQYAIKVEGKMDLESVSNYDEVKNAIMEKLLRLQEEPIREECPL 591
            L P A  QL++ +D  L ++I VE K+  + V NY EV+++I++KL  L E P R E PL
Sbjct: 597  LVPEALRQLIDEIDEALTFSITVEHKVSKDDVLNYAEVRDSIIDKLDMLCETPQRNEEPL 656

Query: 592  IYHLDVAAMYPNIILTNRLQPPSIVTDEVCTACDFNR-PGKTCLRKLEWVWRGEIFMGKR 650
            IYHLDVAAMYPNIILTNRLQP ++V + VC ACDFN  P   C R + W WRGE F+  R
Sbjct: 657  IYHLDVAAMYPNIILTNRLQPNAVVDESVCAACDFNEGPDSICQRNMTWSWRGEYFLASR 716

Query: 651  SDYYHLKKQIESE-FVDGTN-----GHLSKSFLDLPKMEQQSRLKDRLKKYCQKAYKRVL 704
             +   ++ Q++ E FV  +N       ++K+F +L   EQ + L  R+ +Y +K Y R  
Sbjct: 717  GEVNMIQNQLQQEQFVVPSNIFEPSNTVTKAFHELRINEQDTHLTKRVSEYSRKVYGRAH 776

Query: 705  DKPVTELREAGICMRENSFYVDTVRSFRDRRYEYKGLNKVWKGKLSEAKASGNSIKIQEA 764
            +  V E RE+ +C RE+ FYV+TVR FRDRRYEYK L+K WKGKL     + +     EA
Sbjct: 777  ETKVVE-RESIVCQREHPFYVNTVRDFRDRRYEYKSLHKSWKGKLDALLKTNDLPAADEA 835

Query: 765  QDMVVLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIG 824
            + M+++YDSLQLAHKCILNSFYGYVMRKGARW+SMEMAG+V  TGAKIIQ AR  +EK+G
Sbjct: 836  KRMIIIYDSLQLAHKCILNSFYGYVMRKGARWFSMEMAGIVCLTGAKIIQLARTRVEKLG 895

Query: 825  KPLELDTDGIWCVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVD 884
            +PLELDTDGIWC+LP SFPENF  K K+  K+L ISYPCVMLN  V    TN QYQ L++
Sbjct: 896  RPLELDTDGIWCILPKSFPENFKLKLKN-GKELFISYPCVMLNHLVHAEFTNHQYQDLIE 954

Query: 885  PVSKTYETHSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKR 944
                 Y   SE SI FEVDGPY AMILPAS +E  L+KKRYAVFN DG+LAELKGFE+KR
Sbjct: 955  ---DKYVVTSENSIFFEVDGPYHAMILPASTQEDKLLKKRYAVFNHDGSLAELKGFEVKR 1011

Query: 945  RGELKLIKVFQAELFDKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISE 1004
            RGELKLIK FQ+ +F  FL G++++ECY+ V A ANRWLD+L ++  D++D+EL D ISE
Sbjct: 1012 RGELKLIKNFQSSIFKVFLEGTSLKECYTMVGAAANRWLDILFSKAVDLSDAELFDLISE 1071

Query: 1005 SSTMSKSLADYGEQKSCAVTTARRLSDFLGDTMVKDKGLRCQYIVACEPQGTPVSERAVP 1064
            + +MSK+L +YG QKS ++ TARRL++FLGD MVKDKGL C++I++ +P   PVSERA+P
Sbjct: 1072 NRSMSKALDEYGAQKSTSIKTARRLAEFLGDQMVKDKGLACKFIISAKPYDLPVSERAIP 1131

Query: 1065 VAIFETDAEIMKFYLRKWCKTSS--DVGIRSIVDWSYYKQRLSSAIQKIITIPAAMQKVS 1122
            +AIF+ ++ + +F+LRKW K SS  +V IR I+DW YY +R  S IQK+ITIPAAMQ+VS
Sbjct: 1132 IAIFQAESSVRRFFLRKWLKDSSIIEVNIRDILDWQYYIERFGSVIQKLITIPAAMQQVS 1191

Query: 1123 NPVPRVVHPDWLYKKVREKEDKFRQRKLVDIFSSLKKDDFLNKTCNAETNLMDENVEDLE 1182
            NP+PRV HPDWL K+V  +EDK +QR++ D F  + K  F+N                  
Sbjct: 1192 NPIPRVRHPDWLLKRVSAQEDKLKQRRITDAFIKVDKQTFIN------------------ 1233

Query: 1183 DFPKKRRNSVNGPRPIVRCFEVNNEQKTVKTTDQVDSLRQQLEPSEVSDQQPSSQNAIDT 1242
            ++  +   S    +P+    E           D    +  +L P E             T
Sbjct: 1234 NYSAEATESAKLIKPLNLSIE-----------DDGSDILDELTPEE------------RT 1270

Query: 1243 ENIDRIVDYKGWLELKKRKWKDNLDRRKKQKLGSLRASHQANGVSESLGDMINHKEAQRR 1302
            E ++   DY  WL + K++W     R K+     L+ +      + S  D+    + +RR
Sbjct: 1271 ELVE--TDYLQWLAISKQRW-----RTKQLAQAELKQAQAKGARNSSNIDIAETAKPKRR 1323

Query: 1303 TGVGSY----------FRRQETAMTRCHW-----QIIQLVPSSQSGVFLAWVVVEGIMVR 1347
             G   Y          F+   +     +      Q++++V S  +G F+ WV+    + +
Sbjct: 1324 IGSTVYTTYAGHSSKRFKSGSSTSATMYAGSSGVQLLEIVESEIAGTFILWVLFSSGIQQ 1383

Query: 1348 IPITVPRLFYLNSKDPIVEKFPGR------RVNKTLPHGRRSFNLIEVMIDEDQFRKESK 1401
            + + VPR  Y+NSK     K P        + ++ LP      +L E+ + E  + + + 
Sbjct: 1384 VRLNVPRRLYMNSKVSDPGKLPNHPQLTVTKRSRILPRNHTCHHLYELEMPESFYIENNS 1443

Query: 1402 KLAALLADPEVE 1413
              AAL   P+V+
Sbjct: 1444 LFAALFNHPDVD 1455



 Score =  239 bits (609), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 174/678 (25%), Positives = 296/678 (43%), Gaps = 140/678 (20%)

Query: 1409 DPEVEVLGWQQNAAKIGMQRCAASSQWFNERISLARYAHI-------------------- 1448
            D +   +GWQQ+  +           +  +RI LARYA I                    
Sbjct: 1654 DVQFPPIGWQQHGLRRMFGHFLNLDDFITDRIKLARYADIPLCNIESDYTMFLSDVFMAR 1713

Query: 1449 --------LWISDDGVPDLGGTSEEDECFADEV-HQPVLTYPGAYRKVSVELKIHHLSVN 1499
                    LW S  G PDLGG   ED  FA  V   P +  PG++  + +E+ I  L++N
Sbjct: 1714 RLTKADALLWFSLSGKPDLGGAENEDTHFAYAVPTNPEINKPGSFSSMCIEMDIWDLALN 1773

Query: 1500 ALLKSNQVNEMEGGGLFGFDQDMNSGPYNNE----------------------------- 1530
             +L+++ +++ME          ++S  YN                               
Sbjct: 1774 TILQTDLLHDMEN--------PISSTSYNQHQVVTSMQLDHSEKLGDTSAKMIKEDSYDE 1825

Query: 1531 --------LCGFDETTSSAPAFRVVKQLIQRCLTDAVTSGNVFADAILQHLYRWLCSPHS 1582
                    L   D  T S P + V + +I+  + D V   N FA  +L+HLYRW+ SP +
Sbjct: 1826 QGTLTLSMLDDADRDTISRPVYNVFRGMIKGWM-DEVRRKNRFASHLLEHLYRWITSPSA 1884

Query: 1583 KLHDPVLHRILHKVMQKVFAMLLAEFRKLGATIIFANFSKVIIDTGKFDLSAAKAYCDSL 1642
            +  DP L R +H +M++VF+ L+   RKLG+ +I+A+F K+++ T K  L  A  Y    
Sbjct: 1885 RFFDPALFRFVHDLMKRVFSSLVNHLRKLGSEVIYASFEKIVVSTNKMTLPNAVGYIAYT 1944

Query: 1643 LKALQTRELFEWIELEPVHFWHSLLFMDQYNYGGIPARADESLDDDSQVDIVSS------ 1696
            + A+  R+LF  IE++PV FW  +++MD +N+ GI    +ES D  + VD   +      
Sbjct: 1945 VAAMSKRDLFAHIEIKPVRFWRHMMWMDVFNWAGIELVQNES-DGTTHVDSAHAFNKENM 2003

Query: 1697 ----------WNIAEYLPKEIQDHFVLVVSEFMYIPWKHAQKLAASRASLQEGSSCTPSI 1746
                      W++ + LP   Q  F+ +V+E++                         S+
Sbjct: 2004 DEENARVDMKWSMIDGLPARHQHEFMRLVTEYL------------------------DSV 2039

Query: 1747 TVAAAENFESHIVQYVKGEISSYFTGKLLSIVRDAIHHMKKMNNDQHNSPGVMQT----- 1801
             V  A    S +V++V   + + F  +L+++VR+    + K +    ++ G  ++     
Sbjct: 2040 RVCHATT-RSALVEHVSKLLQTTFKRQLMTVVREFSKTVTKKSISPASTNGKSESTWDNG 2098

Query: 1802 AANIHKVDAPLEFIKHVCAAFALDQNVQHDVLVMRKNLLKYVRVREFAPEAEFRDPCPSF 1861
            + N    DA LEF+K + A   LD+ ++  V  ++++LL  + V +F+  A F       
Sbjct: 2099 SYNRTFKDANLEFVKLISAVLGLDEQLEPQVRALKRDLLSILGVTQFSKSAVFAPAQERL 2158

Query: 1862 ILPNVICSYCNDCRDLDLCRDMALLAQD---------------WHCAMPQCGQPYDREVM 1906
            +L  VIC +C+ CRDLDL RD      +               W C+   C   YDR  +
Sbjct: 2159 VLHQVICEFCSFCRDLDLTRDCDFHVLEDIEDDTVPRAEQNPFWACS--ACHMEYDRLSL 2216

Query: 1907 ENALLQIVRQRERLYHLQDLVCIRCNQVKAAHLAEQCA-CAGSFRCKEDASDFRSKMQIF 1965
            E  L+    ++  ++ LQD+ C  C  VKA  L   C  C       ++ ++     +  
Sbjct: 2217 EQRLVDTAIKKMTVWQLQDVRCTNCRFVKAEDLRNSCPRCTSKVVTVQNINEMLFMFKEL 2276

Query: 1966 LNIANRQGFQLLQECTSW 1983
              I+++ G ++L+E  ++
Sbjct: 2277 ELISHKHGMEMLKEVAAF 2294


>gi|328851637|gb|EGG00789.1| hypothetical protein MELLADRAFT_39519 [Melampsora larici-populina
            98AG31]
          Length = 2282

 Score = 1305 bits (3377), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 687/1462 (46%), Positives = 927/1462 (63%), Gaps = 153/1462 (10%)

Query: 26   ELEAKLGYDLFSEGDKRLGWLLTFASSSLEDEDTRKVYSCIDLYFVSQDGSTFKSKYKFR 85
            EL+ KLG+    +G  R+GWL+     ++ D+   +  + +DLYF+  DG  F++   +R
Sbjct: 73   ELDEKLGFTRIEDGSPRVGWLINI-QPAVPDKSPSQPNAAVDLYFIQDDGEMFRATMSYR 131

Query: 86   PYFYAATKEKMEMDVEAYLRRRYESQIADIEILEKEDLDLKNHLSGLHKSYLKISFDTVQ 145
            PYFY AT+   E +VE +L+RR+E      E + KEDL L NHL+G  + ++KI F  ++
Sbjct: 132  PYFYIATRSGKEGEVEDWLQRRFEGLFFKSERVFKEDLQLPNHLTGYRRQFIKIHFRNIE 191

Query: 146  QLMDVKKDLLHVVERNQAKFDAAEAYESILTGK------------REQRPQDFLDC---- 189
             L+ V+++LL +  +N+ K DA + Y  ++ G                +  D+L+     
Sbjct: 192  LLLRVRRELLSLATKNRDKMDALDTYAEMIQGGCSNLDLADMEDVEYTQEDDYLEVEGGA 251

Query: 190  --------------------------IVDLREYDVPYHIRFAIDND-------------V 210
                                      I+D+REYDVPY++R AID               +
Sbjct: 252  QRNRHKSMATAKSHAASAAATDPAEWIIDIREYDVPYYLRVAIDRGKQFPYRSAFTYIYL 311

Query: 211  RCGQWYDVSISSTGPLLEKRVDLLQRAEVHVCAFDIETTKLPLKFPDADYDIIMMISYML 270
            R G WY V+ +    L  +  D ++RAE  V A+DIETTK PLKFP++  D IMMISYM+
Sbjct: 312  RVGLWYTVTATHEEVLCFRIPDRVERAEPVVMAYDIETTKAPLKFPESSSDQIMMISYMI 371

Query: 271  DGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNVNNEIELLRLWFAHMQEVKPGIYV 330
            DGQG+LI NRE VG+DI+D +Y+PKPE++G F + N  +E  L+R WF H+Q+ +P +  
Sbjct: 372  DGQGFLITNREIVGDDIDDFDYSPKPEYDGPFTIFNEASESALIRRWFEHIQQSRPTVIA 431

Query: 331  TYNGDYFDWPFLETRAAHHGFKMSEELGFQCDKNQGECRAKFACHLDCFAWVKRDSYLPQ 390
            TYNGD FD+PF+  RA+ HG  M +E GF+ D ++G+ +++   H+DCF WVKRDSYLPQ
Sbjct: 432  TYNGDSFDFPFVAARASAHGIDMFKETGFRLD-SEGDFKSRTCIHMDCFRWVKRDSYLPQ 490

Query: 391  GSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQMMASYSVSDAVATYYLYMTYVHPFIF 450
            GSQGLKAVT AKLGY+P+E++PE M  +A E+PQ++A YSVSDAVATYYLYM YVHPFIF
Sbjct: 491  GSQGLKAVTVAKLGYNPIELDPELMTPYAIEQPQVLAQYSVSDAVATYYLYMKYVHPFIF 550

Query: 451  SLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVICPNKHQSDPEKFYRNHLLESETYI 510
            SL  IIP++PDEVLRKGSGTLCE LLMV+AY  ++I PN+H +     Y  HLLE+ETY+
Sbjct: 551  SLCNIIPLNPDEVLRKGSGTLCETLLMVEAYVGDIIMPNRHVNAHGTMYEGHLLENETYV 610

Query: 511  GGHVECLESGVFRSDLPTSFKLDPSAYEQLLNNLDRDLQYAIKVEGKMDLESVSNYDEVK 570
            GGHVE LE+GVFRSD+P+ FKL P   +QL+++LD  L+++I  EG+  LE V NYDE+K
Sbjct: 611  GGHVEALEAGVFRSDIPSDFKLVPRRCQQLIDDLDSALKFSIVEEGQYSLEDVVNYDEIK 670

Query: 571  NAIMEKLLRLQEEPIREECPLIYHLDVAAMYPNIILTNRLQPPSIVTDEVCTACDFNRPG 630
             AI   L  +++ P R++ PLIYHLDVAAMYPNI+L+NRLQP S+V +  C ACDFNRPG
Sbjct: 671  FAIQSGLETMRDHPNRQDTPLIYHLDVAAMYPNIMLSNRLQPDSVVDEATCAACDFNRPG 730

Query: 631  KTCLRKLEWVWRGEIFMGKRSDYYHLKKQIESE-FVDGTNGHLSKSFLDLPKMEQQSRLK 689
            KTC R++ W WRGE F  K  +Y  ++  +ESE F      +  + F DL   EQ S L 
Sbjct: 731  KTCDRRMTWAWRGEYFPAKLDEYKMVRNALESESFPPKWPNNPPRKFSDLAPAEQTSLLH 790

Query: 690  DRLKKYCQKAYKRVLDKPVTELREAGICMRENSFYVDTVRSFRDRRYEYKGLNKVWKGKL 749
             RL  Y +K YK+  +  + E +EA IC REN FY+DTVR+FRDRRY+YKGL+K WK   
Sbjct: 791  KRLGDYSRKVYKKTHETKIVE-KEAIICQRENPFYIDTVRAFRDRRYKYKGLHKQWKTTA 849

Query: 750  SEAKASGNSI-KIQEAQDMVVLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYT 808
               + +G S+  I EA+ M+V+YDSLQLAHKCILNSFYGYVMRKGARW+SMEMAG+   T
Sbjct: 850  EVTQKNGGSVGDIAEAKKMIVIYDSLQLAHKCILNSFYGYVMRKGARWHSMEMAGITCLT 909

Query: 809  GAKIIQNARLLIEKIGKPLELDTDGIWCVLPGSFPENFTFKTKDLKKKLTISYPCVMLNV 868
            GAKIIQ AR +IE++G+PLELDTDGIWC+LPG FPENF FK  +  K   ISYPC MLN 
Sbjct: 910  GAKIIQMAREIIEEVGRPLELDTDGIWCMLPGIFPENFNFKLSN-GKTYRISYPCSMLNH 968

Query: 869  DVARNNTNDQYQTLVDPVSKTYETHSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVF 928
             V +  TN QY    +P  K Y+  +E SI FE+DGPYKAMILP+SKEE  L+KKRYAVF
Sbjct: 969  LVHQKFTNHQYHEF-NPQFKKYDVRAENSIFFELDGPYKAMILPSSKEEDKLLKKRYAVF 1027

Query: 929  NDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFLHGSTIEECYSAVAAVANRWLDLLDN 988
            N DG+LAELKGFE+KRRGEL+LIK+FQ  +F+KFL GST++ECY AVA VANRWLD+L  
Sbjct: 1028 NPDGSLAELKGFEVKRRGELQLIKIFQTAIFEKFLKGSTLKECYDAVAEVANRWLDVLST 1087

Query: 989  QGKDIADSELIDYISESSTMSKSLADYGEQKSCAVTTARRLSDFLGDTMVKDKGLRCQYI 1048
            +   + D ELI+ ISE+ +MSK+LA+YG QKS ++ TA+RLS+FLG+ MVKDKGL C++I
Sbjct: 1088 KAISMHDEELIELISENRSMSKTLAEYGTQKSTSIRTAKRLSEFLGEQMVKDKGLSCRFI 1147

Query: 1049 VACEPQGTPVSERAVPVAIFETDAEIMKFYLRKWCKTSS--DVGIRSIVDWSYYKQRLSS 1106
            ++ +P G+PV+ERAVPVAIF  +  + + YLR+W K +S  D+ +RSI+DW YY +RL S
Sbjct: 1148 ISAKPYGSPVTERAVPVAIFSAEPSVQQHYLRRWLKDNSLVDLSLRSILDWPYYTERLGS 1207

Query: 1107 AIQKIITIPAAMQKVSNPVPRVVHPDWLYKKVREKEDKFRQRKLVDIFSSLK-------- 1158
             IQK+ITIPAAMQKVSNPVPR+ HPDWL +++  +ED F+Q K+ D+FS  K        
Sbjct: 1208 VIQKLITIPAAMQKVSNPVPRIHHPDWLARRLATREDTFKQHKITDMFSRQKPIPQDVIS 1267

Query: 1159 KDDFLNKTCNAETNLMDENVEDLEDFPKKRRNSVNGPRPIVRCFEVNNEQKTVKTTDQVD 1218
              D L  T   ET L  ++ E  E  P +       PRP                     
Sbjct: 1268 TRDLLQAT---ETALTTKSHEVREPLPSR-------PRP--------------------- 1296

Query: 1219 SLRQQLEPSEVSDQQPSSQNAIDTENIDRIVDYKGWLELKKRKWKDN-LDRRKKQKLGSL 1277
                                       D  VDY GW+   K  WK+  + R+ ++ +G  
Sbjct: 1297 ---------------------------DISVDYSGWIAAMKPVWKEQRMARKSERTMGLS 1329

Query: 1278 RASHQANGVSESLGDMINHKEAQRRTGVGSYFRRQETAMTRCHWQIIQLVPSS-QSGVFL 1336
            RAS     +  + GD            + S  ++Q   +     +I+ ++P   + G F 
Sbjct: 1330 RAS----ALRSNKGD------------ITSLLQQQTRRLASSLMEIVHILPDPHKPGEFR 1373

Query: 1337 AWVVVEGIMVRIPITVPRLFYLNSK-DPIVEKFPG----RRVNKTLPHGRRSFNLIEVMI 1391
             W +V+ ++  + + +PR FY+N K  P    FP       V KTLP  +    L +V +
Sbjct: 1374 IWCLVQEVLHPLKVIIPREFYINLKRHPGPNFFPKSCHVEPVVKTLPRSQTRLYLYKVSV 1433

Query: 1392 DEDQFRKESKKLAALLADPEVE 1413
             E+ F +++ +   +   PEVE
Sbjct: 1434 AENAFIEDASEYLRMFTAPEVE 1455



 Score =  280 bits (715), Expect = 7e-72,   Method: Compositional matrix adjust.
 Identities = 178/601 (29%), Positives = 304/601 (50%), Gaps = 78/601 (12%)

Query: 1408 ADPEVEVLGWQQNAAKIGMQRCAASSQWFNERI--------------------------- 1440
            AD + E  GWQ+ AA+  +Q    +S +  ERI                           
Sbjct: 1653 ADNKFEAFGWQRYAAERMVQHFLRASSFIQERILQAEQFDVPVCNFESDAASFLMDLEFC 1712

Query: 1441 -SLARYAHILWISDDGVPDLGGTSEEDECFADEV----HQPVLTYPGAYRKVSVELKIHH 1495
              L R  HILW S    PDLGG   E++  A +V      P ++  GAY   S+EL I  
Sbjct: 1713 KKLTRSDHILWWSSSPKPDLGG--RENDINAQQVLETLSSPEISVMGAYSNASIELSIVD 1770

Query: 1496 LSVNALLKSNQVNEMEGG-GLFGFDQ------DMNSGPYNNE--LCGFDETTSSAPAFRV 1546
            L+++A+L+S  V E + G    GF        D + G  N+   L   D TT +   F +
Sbjct: 1771 LAIDAVLQSATVYEGDKGESTIGFQNASHNLDDYSKGSANSHHILGDSDLTTQT---FAL 1827

Query: 1547 VKQLIQRCLTDAVTSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLA 1606
             + +++  + ++V S       +++H +RW+ S  SK+ DP L+  +H +M+KVF+ LL 
Sbjct: 1828 FRSMVRVWMAESVKSNGHHYRGLIRHFWRWISSASSKMFDPALYHFVHGLMKKVFSQLLT 1887

Query: 1607 EFRKLGATIIFANFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSL 1666
            EFR+LG  +I+A+FS++ + T K   S A AY   ++ A+ +R+LF+++EL+ V FW  L
Sbjct: 1888 EFRRLGTKVIYADFSRIFLLTSKTTSSNAYAYSCYIVSAVNSRDLFKFLELDIVRFWDQL 1947

Query: 1667 LFMDQYNYGGIPARADESLDDDSQVDIVS---SWNIAEYLPKEIQDHFVLVVSEFMYIPW 1723
            L++D  N+ GI     ++ +D  ++D+      WN+  +LP  +Q  F+ V+  F++   
Sbjct: 1948 LWVDVTNFAGIICNRPDATEDSGELDLQHVDMHWNMVNFLPPAVQQDFLQVICVFIH--- 2004

Query: 1724 KHAQKLAASRASLQEGSSCTPSITVAAAENFESHIVQ-YVKGEISSYFTGKLLSIVRDAI 1782
                 +   ++      S +  IT A  +  E+ +++  +K +++      + S+    I
Sbjct: 2005 ----DINQCKSQTTSDHSQSQPITDADHKQMEAELLRPLIKQKLTRQLMKLVTSLTDRQI 2060

Query: 1783 HHMKKMNN----DQHNSPGVMQTAANIHKVDAPLEFIKHVCAAFALDQNVQHDVLVMRKN 1838
              M + +     +    PG     ++I      LEF+K +C    L + V  ++  M++ 
Sbjct: 2061 EAMSQSDTRATFEFPRLPG-----SHILMKKPVLEFVKMICFIMELAKPVASEIRTMKRL 2115

Query: 1839 LLKYVRVREFAPEAEFRDPCPSFILPNVICSYCNDCRDLDLCRDMALL----------AQ 1888
            LL  + VREFA EA F++PC  F +P  IC +CN  R++DLCRD  LL          + 
Sbjct: 2116 LLDLIGVREFASEAVFKNPCVPFAIPVTICKHCNVMRNIDLCRDPDLLPSARSSSANHSS 2175

Query: 1889 DWHCAMPQCGQPYDREVMENALLQIVRQRERLYHLQDLVCIRCNQVKAAHLAEQCACAGS 1948
            DWHCA   CG  Y++  +E ++++ +  +  ++ LQD+ C RC+Q+KA  ++ +C C+G 
Sbjct: 2176 DWHCA--HCGHEYNKLAIETSIVEQLGNQVSMFQLQDIRCSRCSQIKADDMSLRCHCSGE 2233

Query: 1949 F 1949
            +
Sbjct: 2234 Y 2234


>gi|68486906|ref|XP_712675.1| hypothetical protein CaO19.9901 [Candida albicans SC5314]
 gi|68486947|ref|XP_712655.1| hypothetical protein CaO19.2365 [Candida albicans SC5314]
 gi|46434061|gb|EAK93482.1| hypothetical protein CaO19.2365 [Candida albicans SC5314]
 gi|46434084|gb|EAK93504.1| hypothetical protein CaO19.9901 [Candida albicans SC5314]
          Length = 2211

 Score = 1305 bits (3376), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 672/1404 (47%), Positives = 920/1404 (65%), Gaps = 72/1404 (5%)

Query: 25   EELEAKLGYDLFSEGDK-----RLGWLLTFASSSLEDEDTRKVYSCIDLYFVSQDGSTFK 79
            + +++ +G+D    G+      R GWL+   ++++  +D    YS +D YF+ ++G +FK
Sbjct: 69   DHIDSIMGFDRLEHGENDGNKPRKGWLINMHATTIPTDDYLAGYSGVDYYFLDEEGGSFK 128

Query: 80   SKYKFRPYFYA-ATKEKMEMDVEAYLRRRYES-QIADIEILEKEDLDLKNHLSGLHKSYL 137
            +  +F PYF+        E +VE ++R+  E+  +     + KEDL L NHL GL K+ +
Sbjct: 129  ATLQFDPYFFVDVLPGDHESEVEEWMRKYLETANVKSYSRVIKEDLKLPNHLLGLQKTLI 188

Query: 138  KISFDTVQQLMDVKKDLLHVVERNQAKFDAAEAYESILTGKREQRPQDFLDCIVDLREYD 197
            K+SF  +Q L+  ++ L  +++ NQ K ++   Y    T K  +   D    I D+REYD
Sbjct: 189  KLSFHNIQDLLAARRLLSPIIKDNQLKKESRNMY----TFKEIETIMDPSVYIDDIREYD 244

Query: 198  VPYHIRFAIDNDVRCGQWYDVSISSTGPLLEKRVDLLQRAEVHVCAFDIETTKLPLKFPD 257
            VPYH+R +ID +VR G+WYDV    +     +  + +  A+  V AFDIETTK PLKFPD
Sbjct: 245  VPYHVRVSIDRNVRVGKWYDVYAKHSKVDFVEDKEKIAFADPVVLAFDIETTKAPLKFPD 304

Query: 258  ADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNVNNEIELLRLW 317
            A  D IMMISYM+DG+G+LI NRE + EDI+D EYTPKPE+ G F + N  +E  +L+ +
Sbjct: 305  AKIDQIMMISYMIDGEGFLITNREIISEDIDDFEYTPKPEYPGLFTIFNEPDEKHVLKRF 364

Query: 318  FAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDKNQGECRAKFACHLD 377
            F H+++VKP +  T+NGD+FDWPF+E R   H   M EE+GF  D N+GE ++K+  H+D
Sbjct: 365  FEHIRDVKPTVIATFNGDFFDWPFVENRTRFHDMDMFEEIGFAKD-NEGEYKSKYCVHMD 423

Query: 378  CFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQMMASYSVSDAVAT 437
            CF WVKRDSYLPQGSQGLKAVT AKLGY+P E++PE M  +A +KPQ+++ YSVSDAVAT
Sbjct: 424  CFRWVKRDSYLPQGSQGLKAVTTAKLGYNPTELDPELMTPYAYDKPQLLSEYSVSDAVAT 483

Query: 438  YYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVICPNKHQSDPEK 497
            YYLY  YVHPFIFSL TIIP++PDEVLRKG+GTLCEMLL VQAY+ N++ PNKH    E+
Sbjct: 484  YYLYYKYVHPFIFSLCTIIPLNPDEVLRKGTGTLCEMLLSVQAYEGNILLPNKHSDPIER 543

Query: 498  FYRNHLLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQLLNNLDRDLQYAIKVEGK 557
            FY  HLLESETY+GGHVE LE+GVFRSD+PT FK+DP+A ++LL NL   +++ I+VE  
Sbjct: 544  FYEGHLLESETYVGGHVESLEAGVFRSDIPTHFKIDPTAIDELLGNLHNSIKFCIEVENG 603

Query: 558  MDLESVSNYDEVKNAIMEKLLRLQEEPIREECPLIYHLDVAAMYPNIILTNRLQPPSIVT 617
              +E V N+DE+   I   LL L+  P R+E PLIYH+DVA+MYPNI+ +NRLQP S+ +
Sbjct: 604  KKMEDVENFDEIYTQIESSLLELKNNPSRQEKPLIYHVDVASMYPNIMTSNRLQPDSMKS 663

Query: 618  DEVCTACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYYHLKKQIESEFVDGTNGHL-SKSF 676
            +E C ACDFNRPGK C R+L W WRGE +  + ++Y  +K+ +++E   G    L  ++F
Sbjct: 664  EEDCAACDFNRPGKNCDRRLPWAWRGEYYPAEMNEYNMIKRTLQNETFPGARPWLPPRTF 723

Query: 677  LDLPKMEQQSRLKDRLKKYCQKAYKRVLDKPVTELREAGICMRENSFYVDTVRSFRDRRY 736
             +L   EQ +++K R+  Y +K Y RV    V   REA IC REN FYVDTVRSFRDRRY
Sbjct: 724  DELSYAEQAAKIKKRISDYSRKVYHRVKSSKVV-TREAIICQRENPFYVDTVRSFRDRRY 782

Query: 737  EYKGLNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHKCILNSFYGYVMRKGARW 796
            E+KGL KVWKGK+ +  AS ++I   EA+ MVVLYDSLQLAHK ILNSFYGYVMRKG+RW
Sbjct: 783  EFKGLAKVWKGKVGKI-ASNDTIARDEAKKMVVLYDSLQLAHKVILNSFYGYVMRKGSRW 841

Query: 797  YSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLPGSFPENFTFKTKDLKKK 856
            YSMEMAGV   TGA IIQ AR L+E+IG+PLELDTDGIWC+LP SFPENF  K KD  KK
Sbjct: 842  YSMEMAGVTCLTGATIIQMARALVERIGRPLELDTDGIWCILPKSFPENFNLKCKD-GKK 900

Query: 857  LTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEFEVDGPYKAMILPASKE 916
            + + YPC MLN  V    TN QYQ LVDP +  Y+T S+ SI FEVDGPYKAMILP SKE
Sbjct: 901  IFLEYPCSMLNYLVHERFTNHQYQDLVDPETFKYKTRSDNSIFFEVDGPYKAMILPTSKE 960

Query: 917  EGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFLHGSTIEECYSAVA 976
            EG  +KKRYAVFN+DG+LAELKGFE+KRRGEL+LIK FQ+++F  FL G T++ CY AVA
Sbjct: 961  EGKGLKKRYAVFNEDGSLAELKGFELKRRGELQLIKNFQSDIFKLFLEGDTLDTCYQAVA 1020

Query: 977  AVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLADYGEQKSCAVTTARRLSDFLGDT 1036
             VAN WLD+LD +G  + D +LI+ I E+ +MSKSLADYG+QKS ++TTA+RL +FLG+ 
Sbjct: 1021 TVANNWLDVLDTKGGMLEDEDLIELICENRSMSKSLADYGDQKSTSITTAKRLGEFLGEE 1080

Query: 1037 MVKDKGLRCQYIVACEPQGTPVSERAVPVAIFETDAEIMKFYLRKWCKTSS--DVGIRSI 1094
            MVKD GL  +YI++ +P G+PV+ERA+PV+IF +D +  + +L+KW K  S      R +
Sbjct: 1081 MVKDAGLATKYIISAKPIGSPVTERAIPVSIFSSDKK--EIFLKKWLKDPSLNKFSPRDV 1138

Query: 1095 VDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLYKKVREKEDKFRQRKLVDIF 1154
            +DW+YY +RL+S +QKIITIPAA+Q V NPVPRV HPDWL KKV+  ED  +Q+ + + F
Sbjct: 1139 IDWNYYYERLASVVQKIITIPAALQDVKNPVPRVPHPDWLQKKVKNSEDIMQQKSISNFF 1198

Query: 1155 SSLKKDDFLNKTCNAETNLMDENVEDLEDFPKKRRNSVNGPRPIVRCFEVNNEQKTVKTT 1214
                K+D                ++D+EDF       V+   P  +  +V + ++     
Sbjct: 1199 KKTTKEDI--------------KLKDIEDF-----GEVDASVPKGKVVKVTSRKRKSGKA 1239

Query: 1215 DQVDSLRQQLEPSEVSDQQPSSQNAIDTENIDRIVDYKGWLELKKRKWKDNLDRRKKQKL 1274
            + V          E +++   +Q  ++        DY+G+L+ +K KW       K Q+ 
Sbjct: 1240 NMV----------EDAEEDEKNQAILNGPCPSMTEDYQGFLQYQKAKW-------KVQQA 1282

Query: 1275 GSLRASHQANGVSESLGDMINHKEAQRRTGVGSYFRRQETAMTRCHWQIIQL-VPSSQSG 1333
            G  R        SES           +R+ VG  FR++   +   +W+I++  +  ++ G
Sbjct: 1283 GRERRRRLFGANSES----------SQRSTVGGMFRKRAENIAGTNWEILEYKLDPTKPG 1332

Query: 1334 VFLAWVVVEGIMVRIPITVPRLFYLNSKDPIVEK--FPGRRV---NKTLPHGRRSFNLIE 1388
                +V     +      VP+  Y + K  + ++   PG  +   N  LP+G    NL +
Sbjct: 1333 DLKVYVRAGDKVHTFNFHVPKKVYASFKTKLSQRKSIPGCEIEESNAILPNGHDGTNLYK 1392

Query: 1389 VMIDEDQFRKESKKLAALLADPEV 1412
            + + +  F+++   + +LL D  +
Sbjct: 1393 LTMAQSVFQEQMSDVDSLLQDSNI 1416



 Score =  261 bits (667), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 181/672 (26%), Positives = 320/672 (47%), Gaps = 77/672 (11%)

Query: 1364 IVEKFPGRRVNKTL-----PHGRRSFNLIEVMIDEDQFRKESKKLAALLADPEVEVLGWQ 1418
            ++ K    R NK       P+  R  N++    D    +    +L+       +  +GWQ
Sbjct: 1567 VIGKIHESRSNKAFLAIQSPYSSRILNVLNTTDDFPTIKMNISELS-------LPAVGWQ 1619

Query: 1419 QNAAKIGMQRCAASSQWFNERISLARYAHI----------------------------LW 1450
               +K  +        W    ++ A+YA++                            LW
Sbjct: 1620 SLISKRVINHYFVLGSWIKNLVAFAKYANVPLCNLQIENIGFLVDIEYARRLSENNIVLW 1679

Query: 1451 ISDDGVPDLGGTSEEDECFADEVHQPVLTYPGAYRKVSVELKIHHLSVNALLKSNQVNEM 1510
             S + +PDLGG   +     D +  P +  P  Y    +E++I  L++N +L S  +NE 
Sbjct: 1680 WSPNPLPDLGGFEMDRMIDFDSLAFPTINNPEIYETACLEVEIGTLTINTILTSALINEA 1739

Query: 1511 EGGGLFGFDQDMNSGPYNNELCGFDETTSSAPAFRVVKQLIQRCLTDAVTSGNVFADAIL 1570
            EG  L   D++M+    NN    F E + S+PA  +++ +++    DA+ S N+ AD+I+
Sbjct: 1740 EGTDLA--DENMHFDN-NNGASTFAEDSFSSPALSILRSMVKDWWDDAL-SNNINADSIM 1795

Query: 1571 QHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEFRKLGATIIFANFSKVIIDTGKF 1630
              L  W+    S L+DP LH  +H +  K    L++EF+++GA +IFAN +K++I T K 
Sbjct: 1796 NTLVTWVQRNDSMLYDPSLHYHVHNLTSKALLQLISEFKRMGAQVIFANRNKMLIQTSKI 1855

Query: 1631 DLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLFMDQYNYGGIPARADESLDDDSQ 1690
             +  + AY   +LKA +++ LF +++L  V +W  L++MD++NYGG   R+   + ++  
Sbjct: 1856 SVENSYAYGQYILKAARSKPLFNFLDLRIVKYWDILIWMDEFNYGG---RSCTEIVNEEM 1912

Query: 1691 VDIV--SSWNIAEYLPKEIQDHFVLVVSEFMYIPWKHAQKLAASRASLQEGSSCTPSIT- 1747
             ++V  + W++ ++LP   Q+ F     +++ I      K        +   + TP +T 
Sbjct: 1913 QNLVPENHWHLQKFLPIIFQNEF----EDWLVIFLDALTKYKNENLLGKGAQANTPRVTQ 1968

Query: 1748 -VAAAENFESHIVQYVKGEISSYFTGKLLSIVRDAIHHMKKMNNDQHNS---PGVMQ--- 1800
             V   +  +    Q V+ E   +  G + +  +  +  M+K+   Q  +   P   Q   
Sbjct: 1969 IVHILKGQKKLQAQEVEEEDDDH--GVIETFKKPILRRMEKLYRRQLEAILNPEFKQEYE 2026

Query: 1801 ----TAANIHKVDAPLEFIKHVCAAFALDQNVQHDVLVMRKNLLKYVRVREFAPEAEFRD 1856
                  + +H  +  LE +K +C  FAL +    +V +++K LL    VR+F+ +A FRD
Sbjct: 2027 FPTLAGSYLHMKNPALELVKFLCHVFALSEKRSKEVRILKKELLLIFDVRDFSKDATFRD 2086

Query: 1857 PCPSFILPNVICSYCNDCRDLDLCRDMALLAQDWHCAMPQCGQPYDREVMENALLQIVRQ 1916
            PC S  LP+VIC YCN  RD+DLCR+  +    W+C    C + Y++  +E    +I+ Q
Sbjct: 2087 PCTSLKLPHVICDYCNHIRDIDLCREEEI--NIWNCL--NCHKAYNKIALEE---EIINQ 2139

Query: 1917 RERL---YHLQDLVCIRCNQVKAAHLAEQCACAGSFRCKEDASDFRSKMQIFLNIANRQG 1973
              +L   ++ QDL C +CNQ++  ++   C C+G++    D      + Q F+N+A    
Sbjct: 2140 FNKLFVKFYGQDLKCNKCNQIRQNNMDLHCKCSGNWIETVDYHAIEKQFQTFVNVAKFYN 2199

Query: 1974 FQLLQECTSWIL 1985
             QLL      I+
Sbjct: 2200 LQLLNGLVEEII 2211


>gi|238880111|gb|EEQ43749.1| DNA polymerase epsilon [Candida albicans WO-1]
          Length = 2211

 Score = 1303 bits (3371), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 670/1404 (47%), Positives = 920/1404 (65%), Gaps = 72/1404 (5%)

Query: 25   EELEAKLGYDLFSEGDK-----RLGWLLTFASSSLEDEDTRKVYSCIDLYFVSQDGSTFK 79
            + +++ +G+D    G+      R GWL+   ++++  +D    YS +D YF+ ++G +FK
Sbjct: 69   DHIDSIMGFDRLEHGENDGNKPRKGWLINMHATTIPTDDYLAGYSGVDYYFLDEEGGSFK 128

Query: 80   SKYKFRPYFYA-ATKEKMEMDVEAYLRRRYES-QIADIEILEKEDLDLKNHLSGLHKSYL 137
            +  +F PYF+        E +VE ++R+  E+  +     + KEDL L NHL GL K+ +
Sbjct: 129  ATLQFDPYFFVDVLPGDHESEVEEWMRKYLETANVKSYSRVIKEDLKLPNHLLGLQKTLI 188

Query: 138  KISFDTVQQLMDVKKDLLHVVERNQAKFDAAEAYESILTGKREQRPQDFLDCIVDLREYD 197
            K+SF  +Q L+  ++ L  +++ NQ K ++   Y    T K  +   D    I D+REYD
Sbjct: 189  KLSFHNIQDLLAARRLLSPIIKDNQLKKESRNMY----TFKEIETIMDPSVYIDDIREYD 244

Query: 198  VPYHIRFAIDNDVRCGQWYDVSISSTGPLLEKRVDLLQRAEVHVCAFDIETTKLPLKFPD 257
            VPYH+R +ID +VR G+WYDV    +     +  + +  A+  V AFDIETTK PLKFPD
Sbjct: 245  VPYHVRVSIDRNVRVGKWYDVYAKHSKVDFVEDKEKIAFADPVVLAFDIETTKAPLKFPD 304

Query: 258  ADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNVNNEIELLRLW 317
            A  D IMMISYM+DG+G+LI NRE + EDI+D EYTPKPE+ G F + N  +E  +L+ +
Sbjct: 305  AKIDQIMMISYMIDGEGFLITNREIISEDIDDFEYTPKPEYPGLFTIFNEPDEKHVLKRF 364

Query: 318  FAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDKNQGECRAKFACHLD 377
            F H+++VKP +  T+NGD+FDWPF+E R   H   M EE+GF  D N+GE ++K+  H+D
Sbjct: 365  FEHIRDVKPTVIATFNGDFFDWPFVENRTRFHDMDMFEEIGFAKD-NEGEYKSKYCVHMD 423

Query: 378  CFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQMMASYSVSDAVAT 437
            CF WVKRDSYLPQGSQGLKAVT AKLGY+P E++PE M  +A +KPQ+++ YSVSDAVAT
Sbjct: 424  CFRWVKRDSYLPQGSQGLKAVTTAKLGYNPTELDPELMTPYAYDKPQLLSEYSVSDAVAT 483

Query: 438  YYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVICPNKHQSDPEK 497
            YYLY  YVHPFIFSL TIIP++PDEVLRKG+GTLCEMLL VQAY+ N++ PNKH    E+
Sbjct: 484  YYLYYKYVHPFIFSLCTIIPLNPDEVLRKGTGTLCEMLLSVQAYEGNILLPNKHSDPIER 543

Query: 498  FYRNHLLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQLLNNLDRDLQYAIKVEGK 557
            FY  HLLESETY+GGHVE LE+GVFRSD+PT FK+DP+A ++LL NL   +++ I+VE  
Sbjct: 544  FYEGHLLESETYVGGHVESLEAGVFRSDIPTHFKIDPTAIDELLGNLHNSIKFCIEVENG 603

Query: 558  MDLESVSNYDEVKNAIMEKLLRLQEEPIREECPLIYHLDVAAMYPNIILTNRLQPPSIVT 617
              +E V N+DE+   I   LL L+  P R+E PLIYH+DVA+MYPNI+ +NRLQP S+ +
Sbjct: 604  KKMEDVENFDEIYTQIESSLLELKNNPSRQEKPLIYHVDVASMYPNIMTSNRLQPDSMKS 663

Query: 618  DEVCTACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYYHLKKQIESEFVDGTNGHL-SKSF 676
            +E C ACDFNRPGK C R+L W WRGE +  + ++Y  +K+ +++E   G    L  ++F
Sbjct: 664  EEDCAACDFNRPGKNCDRRLPWAWRGEYYPAEMNEYNMIKRTLQNETFPGARPWLPPRTF 723

Query: 677  LDLPKMEQQSRLKDRLKKYCQKAYKRVLDKPVTELREAGICMRENSFYVDTVRSFRDRRY 736
             +L   EQ +++K R+  Y +K Y RV    V   REA IC REN FYVDTVRSFRDRRY
Sbjct: 724  DELSYAEQAAKIKKRISDYSRKVYHRVKSSKVV-TREAIICQRENPFYVDTVRSFRDRRY 782

Query: 737  EYKGLNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHKCILNSFYGYVMRKGARW 796
            E+KGL KVWKGK+ +  AS ++I   EA+ MVVLYDSLQLAHK ILNSFYGYVMRKG+RW
Sbjct: 783  EFKGLAKVWKGKVGKI-ASNDTIARDEAKKMVVLYDSLQLAHKVILNSFYGYVMRKGSRW 841

Query: 797  YSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLPGSFPENFTFKTKDLKKK 856
            YSMEMAGV   TGA IIQ AR L+E+IG+PLELDTDGIWC+LP SFPENF  K KD  KK
Sbjct: 842  YSMEMAGVTCLTGATIIQMARALVERIGRPLELDTDGIWCILPKSFPENFNLKCKD-GKK 900

Query: 857  LTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEFEVDGPYKAMILPASKE 916
            + + YPC MLN  V    TN QYQ LVDP +  Y+T S+ SI FEVDGPYKAMILP SKE
Sbjct: 901  IFLEYPCSMLNYLVHERFTNHQYQDLVDPETFKYKTRSDNSIFFEVDGPYKAMILPTSKE 960

Query: 917  EGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFLHGSTIEECYSAVA 976
            EG  +KKRYAVFN+DG+LAELKGFE+KRRGEL+LIK FQ+++F  FL G T++ CY AVA
Sbjct: 961  EGKGLKKRYAVFNEDGSLAELKGFELKRRGELQLIKNFQSDIFKLFLEGDTLDTCYQAVA 1020

Query: 977  AVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLADYGEQKSCAVTTARRLSDFLGDT 1036
             VAN WLD+LD +G  + D +LI+ I E+ +MSKSLA+YG+QKS ++TTA+RL +FLG+ 
Sbjct: 1021 TVANNWLDVLDTKGGMLEDEDLIELICENRSMSKSLAEYGDQKSTSITTAKRLGEFLGEE 1080

Query: 1037 MVKDKGLRCQYIVACEPQGTPVSERAVPVAIFETDAEIMKFYLRKWCKTSS--DVGIRSI 1094
            MVKD GL  +YI++ +P G+PV+ERA+PV+IF +D +  + +L+KW K  S      R +
Sbjct: 1081 MVKDAGLATKYIISAKPIGSPVTERAIPVSIFSSDKK--EIFLKKWLKDPSLNKFSPRDV 1138

Query: 1095 VDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLYKKVREKEDKFRQRKLVDIF 1154
            +DW+YY +RL+S +QKIITIPAA+Q V NPVPRV HPDWL +KV+  ED  +Q+ + + F
Sbjct: 1139 IDWNYYYERLASVVQKIITIPAALQDVKNPVPRVPHPDWLQRKVKNSEDIMQQKSISNFF 1198

Query: 1155 SSLKKDDFLNKTCNAETNLMDENVEDLEDFPKKRRNSVNGPRPIVRCFEVNNEQKTVKTT 1214
                K+D                ++D+EDF       V+   P  +  +V + ++     
Sbjct: 1199 KKTTKEDI--------------KLKDIEDF-----GEVDASVPKGKVVKVTSRKRKSGKA 1239

Query: 1215 DQVDSLRQQLEPSEVSDQQPSSQNAIDTENIDRIVDYKGWLELKKRKWKDNLDRRKKQKL 1274
            + V          E +++   +Q  ++        DY+G+L+ +K KW       K Q+ 
Sbjct: 1240 NMV----------EDAEEDEKNQAILNGPCPSMTEDYQGFLQYQKAKW-------KVQQA 1282

Query: 1275 GSLRASHQANGVSESLGDMINHKEAQRRTGVGSYFRRQETAMTRCHWQIIQL-VPSSQSG 1333
            G  R        SES           +R+ VG  FR++   +   +W+I++  +  ++ G
Sbjct: 1283 GRERRRRLFGANSES----------SQRSTVGGMFRKRAENIAGTNWEILEYKLDPTKPG 1332

Query: 1334 VFLAWVVVEGIMVRIPITVPRLFYLNSKDPIVEK--FPGRRV---NKTLPHGRRSFNLIE 1388
                +V     +      VP+  Y + K  + ++   PG  +   N  LP+G    NL +
Sbjct: 1333 DLKVYVRAGDKIHTFNFHVPKKVYASFKTKLSQRKSIPGCEIEESNAILPNGHDGTNLYK 1392

Query: 1389 VMIDEDQFRKESKKLAALLADPEV 1412
            + + +  F+++   + +LL D  +
Sbjct: 1393 LTMAQSVFQEQMSDVDSLLQDSNI 1416



 Score =  259 bits (661), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 180/672 (26%), Positives = 320/672 (47%), Gaps = 77/672 (11%)

Query: 1364 IVEKFPGRRVNKTL-----PHGRRSFNLIEVMIDEDQFRKESKKLAALLADPEVEVLGWQ 1418
            ++ K    R NK       P+  R  N++    D    +    +L+       +  +GWQ
Sbjct: 1567 VIGKIHESRSNKAFLAIQSPYSSRILNVLNTTDDFPTIKMNISELS-------LPAVGWQ 1619

Query: 1419 QNAAKIGMQRCAASSQWFNERISLARYAHI----------------------------LW 1450
               +K  +        W    ++ A+YA++                            LW
Sbjct: 1620 SLISKRVINHYFVLGSWIKNLVAFAKYANVPLCNLQIENIGFLVDIEYARRLSENNIVLW 1679

Query: 1451 ISDDGVPDLGGTSEEDECFADEVHQPVLTYPGAYRKVSVELKIHHLSVNALLKSNQVNEM 1510
             S + +PDLGG   +     D +  P +  P  Y    +E++I  L++N +L S  +NE 
Sbjct: 1680 WSPNPLPDLGGFEMDRMIDFDSLAFPTINNPEIYETACLEVEIGTLTINTILTSALINEA 1739

Query: 1511 EGGGLFGFDQDMNSGPYNNELCGFDETTSSAPAFRVVKQLIQRCLTDAVTSGNVFADAIL 1570
            EG  L   D++M+    NN    F E + S+PA  +++ +++    DA+ S N+ AD+I+
Sbjct: 1740 EGTDLA--DENMHFDN-NNGASTFAEDSFSSPALSILRSMVKDWWDDAL-SNNINADSIM 1795

Query: 1571 QHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEFRKLGATIIFANFSKVIIDTGKF 1630
              L  W+    S L+DP LH  +H +  K    L++EF+++GA +IFAN +K++I T K 
Sbjct: 1796 NTLVTWVQRNDSMLYDPSLHYHVHNLTSKALLQLISEFKRMGAQVIFANRNKMLIQTSKI 1855

Query: 1631 DLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLFMDQYNYGGIPARADESLDDDSQ 1690
             +  + AY   +LKA +++ LF +++L  V +W  L++MD++NYGG   R+   + ++  
Sbjct: 1856 SVENSYAYGQYILKAARSKPLFNFLDLRIVKYWDILIWMDEFNYGG---RSCTDIVNEEM 1912

Query: 1691 VDIV--SSWNIAEYLPKEIQDHFVLVVSEFMYIPWKHAQKLAASRASLQEGSSCTPSIT- 1747
             ++V  + W++ ++LP   Q+ F     +++ I      K        +   + TP +T 
Sbjct: 1913 QNLVPENHWHLQKFLPIIFQNEF----EDWLVIFLDALTKYKNENLLGKGAQANTPRVTQ 1968

Query: 1748 -VAAAENFESHIVQYVKGEISSYFTGKLLSIVRDAIHHMKKMNNDQHNS---PGVMQ--- 1800
             V   +  +    Q V+ E   +  G + +  +  +  M+K+   Q  +   P   Q   
Sbjct: 1969 IVHILKGQKKLQAQEVEEEDDDH--GVIETFKKPILRRMEKLYRRQLEAILNPEFKQEYE 2026

Query: 1801 ----TAANIHKVDAPLEFIKHVCAAFALDQNVQHDVLVMRKNLLKYVRVREFAPEAEFRD 1856
                  + +H  +  LE +K +C  FAL +    +V +++K LL    VR+F+ +A FRD
Sbjct: 2027 FPTLAGSYLHMKNPVLELVKFLCHVFALSEKRSKEVRILKKELLLIFDVRDFSKDATFRD 2086

Query: 1857 PCPSFILPNVICSYCNDCRDLDLCRDMALLAQDWHCAMPQCGQPYDREVMENALLQIVRQ 1916
            PC S  LP+VIC YCN  RD+DLCR+  +    W+C    C + +++  +E    +I+ Q
Sbjct: 2087 PCTSLKLPHVICDYCNHIRDIDLCREEEI--NIWNCL--NCHKAHNKIALEE---EIINQ 2139

Query: 1917 RERL---YHLQDLVCIRCNQVKAAHLAEQCACAGSFRCKEDASDFRSKMQIFLNIANRQG 1973
              +L   ++ QDL C +CNQ++  ++   C C+G++    D      + Q F+N+A    
Sbjct: 2140 FNKLFVKFYGQDLKCNKCNQIRQNNMDLHCKCSGNWIETVDYHAIEKQFQTFVNVAKFYN 2199

Query: 1974 FQLLQECTSWIL 1985
             QLL      I+
Sbjct: 2200 LQLLNGLVEEII 2211


>gi|50304713|ref|XP_452312.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
 gi|74607133|sp|Q6CUS7.1|DPOE_KLULA RecName: Full=DNA polymerase epsilon catalytic subunit A; AltName:
            Full=DNA polymerase II subunit A
 gi|49641445|emb|CAH01163.1| KLLA0C02585p [Kluyveromyces lactis]
          Length = 2185

 Score = 1302 bits (3370), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 695/1481 (46%), Positives = 950/1481 (64%), Gaps = 122/1481 (8%)

Query: 17   QKLIRSAE-EELEAKLGYDLF----SEGDKRLGWL-----LTFASSSLEDED-----TRK 61
            Q+L+ S + +E++  +G+  F    +  D ++GWL        +   LE+E      T  
Sbjct: 31   QQLLNSKKVDEIDEMMGFPRFIPSPALSDSKVGWLSNMHPTIISQEMLEEEGNLHSATVS 90

Query: 62   VYSCIDLYFVSQDGSTFKSKYKFRPYFYAA-TKEKMEMDVEAYLRRRYESQIADIEILEK 120
              S +D YF+ ++G +FK+   + PYF+ + T E    D+E YL++  E  I  +E++ K
Sbjct: 91   GISGVDFYFIDEEGGSFKTTVTYDPYFFVSCTDETRIHDIEEYLKKTLEQCIKKVELVLK 150

Query: 121  EDLDLKNHLSGLHKSYLKISFDTVQQLMDVKKDLLHVVERNQAKFDAAEAYESILTGKRE 180
            +DL + NHL GL K  +K+SF    QL + ++ L  +++ N+ +    + Y    TG  +
Sbjct: 151  DDLAMNNHLVGLKKHLIKLSFSNSNQLFEARRILRPILKINEDENGKKDIYN---TGS-D 206

Query: 181  QRPQDFLDCIVDLREYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLLEKRVDLLQRAEVH 240
               +D    I D+REYDVPYH+R +ID ++R G+WY VS      L EK    +  A+  
Sbjct: 207  YSTRDVKTLIEDIREYDVPYHVRVSIDKNIRVGKWYAVSAQGLVELEEK----VTFADPV 262

Query: 241  VCAFDIETTKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEG 300
            V AFDIETTK PLKFPD+  D IMMISYM+DG+G+LI NRE + EDIED EYTPK E++G
Sbjct: 263  VLAFDIETTKAPLKFPDSAIDQIMMISYMIDGEGFLITNREIISEDIEDFEYTPKDEYKG 322

Query: 301  YFKVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQ 360
             F + N  +E+ LL+ +F H+++V+P +  T+NGD+FDWPF+E RA  HG  M +E+GF 
Sbjct: 323  QFAIFNEPDEMALLQRFFEHIRDVRPTVISTFNGDFFDWPFVENRAKFHGLNMFDEIGFA 382

Query: 361  CDKNQGECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAK 420
             D ++GE ++ +  H+DCF WVKRDSYLPQGSQGLKAVT+AKLGY+PLE++PE M  +A 
Sbjct: 383  PD-SEGEYKSSYCTHMDCFRWVKRDSYLPQGSQGLKAVTQAKLGYNPLELDPELMTPYAY 441

Query: 421  EKPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQA 480
            EKPQ+++ YSVSDAVATYYLYM YVHPFIFSL TIIP++PDEVLRKG+GTLCEMLLMVQA
Sbjct: 442  EKPQILSEYSVSDAVATYYLYMKYVHPFIFSLCTIIPLNPDEVLRKGTGTLCEMLLMVQA 501

Query: 481  YKANVICPNKHQSDPEKFYRNHLLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQL 540
            Y+ +V+ PNKH    E+FY  HLLESETY+GGHVE LE+GVFRSDL   FK+DP+  + L
Sbjct: 502  YQNSVLLPNKHTDPIERFYDGHLLESETYVGGHVESLEAGVFRSDLKNDFKIDPTVIDIL 561

Query: 541  LNNLDRDLQYAIKVEGKMDLESVSNYDEVKNAIMEKLLRLQEEPIREECPLIYHLDVAAM 600
            L +L   L++ I+VE   ++E V+N++E+K  I  +L  L+    R E PLIYH+DVA+M
Sbjct: 562  LEDLPYALKFCIEVENNGNMEDVTNFEEIKQQITAQLTDLKINNKRNELPLIYHVDVASM 621

Query: 601  YPNIILTNRLQPPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYYHLKKQI 660
            YPNI+ TNRLQP S+  ++ C +CDFNRPGK+C R+L+W WRGE F  K  +Y  +K+ +
Sbjct: 622  YPNIMTTNRLQPDSMKDEKDCASCDFNRPGKSCDRRLKWAWRGEFFPAKMDEYGMVKRAL 681

Query: 661  ESEFVDGTNGHLSKSFL---DLPKMEQQSRLKDRLKKYCQKAYKRVLDKPVTEL--REAG 715
            ++E     N    K FL   +L   +Q S +K RL  Y +K Y RV    VTE   REA 
Sbjct: 682  QNELFPNKNPKSKKQFLTFEELSYSDQVSHIKKRLTDYSRKVYHRV---KVTETVEREAI 738

Query: 716  ICMRENSFYVDTVRSFRDRRYEYKGLNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQ 775
            +C REN FYV+TVRSFRDRRYE+KGL K+WKGKLS+ K      K  EA+ M+VLYDSLQ
Sbjct: 739  VCQRENPFYVNTVRSFRDRRYEFKGLAKLWKGKLSKIKPDDVHSK-DEAKKMIVLYDSLQ 797

Query: 776  LAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIW 835
            LAHK ILNSFYGYVMRKG+RWYSMEMAG+   TGA IIQ AR ++E+IG+PLELDTDGIW
Sbjct: 798  LAHKVILNSFYGYVMRKGSRWYSMEMAGITCLTGANIIQMARSVVERIGRPLELDTDGIW 857

Query: 836  CVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSE 895
            C+LP SFPENF  K ++  KKL +SYPC MLN  V +  TN QYQ LVDP+   Y+T S+
Sbjct: 858  CILPKSFPENFEIKLRN-GKKLFLSYPCSMLNYKVHQKYTNHQYQDLVDPMKFKYQTKSD 916

Query: 896  CSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQ 955
             SI FEVDGPYKAMILP SKEEG  IKKRYAVFN+DG+LAELKGFE+KRRGEL+LIK FQ
Sbjct: 917  NSIFFEVDGPYKAMILPTSKEEGKGIKKRYAVFNEDGSLAELKGFELKRRGELQLIKNFQ 976

Query: 956  AELFDKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLADY 1015
            +++F  FL G+T+E CY+AVA VANRWLD+LD++G  +   +LI+ I E+ +MSK+L +Y
Sbjct: 977  SDIFKLFLEGTTLESCYAAVATVANRWLDVLDSKGAMLETEDLIELICENKSMSKTLKEY 1036

Query: 1016 GEQKSCAVTTARRLSDFLGDTMVKDKGLRCQYIVACEPQGTPVSERAVPVAIFETDAEIM 1075
              QKS ++TTARRL +FLG+ MVKD GL+C++I++ +P   PV+ERA+PVAIF +D  + 
Sbjct: 1037 QGQKSTSITTARRLGEFLGEAMVKDAGLQCKFIISSKPHNAPVTERAIPVAIFSSDLHVK 1096

Query: 1076 KFYLRKWCKTSS--DVGIRSIVDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDW 1133
            + +LR+W   SS  D   R+I+DW YY++RL+S +QKIITIPAA+Q + NPVPRV HPDW
Sbjct: 1097 RTFLRRWLLDSSLNDFDPRAIIDWDYYRERLASVVQKIITIPAALQNIKNPVPRVEHPDW 1156

Query: 1134 LYKKVREKEDKFRQRKLVDIFSSLKKDDFLNKTCNAETNLMDENVEDLEDFPKKRRNSVN 1193
            L KK+   EDKF+Q  L   F S K                   V+D+ED      +S N
Sbjct: 1157 LRKKIAVSEDKFKQTSLNRFFKSTK---------------APPEVKDIED--SFDEHSAN 1199

Query: 1194 GPRPIVRCFEVNNEQKTVKTTDQVDSLRQQLEPSEVSDQQPSSQNAIDTENIDRIVDYKG 1253
              R     ++  ++++   T  + +SL   L PSE+                  + DY G
Sbjct: 1200 KSRIAKVTYKRKSKRRNGDTALEEESL---LLPSEMPPM---------------LDDYVG 1241

Query: 1254 WLELKKRKWK-DNLDRRKKQKLGSLRASHQANGVSESLGDMINHKEAQRRTGVGSYFRRQ 1312
            WL+ +K KWK  ++DR+K++KL    +                   A  R+ +G+  R+ 
Sbjct: 1242 WLQYQKTKWKIQHIDRKKREKLFGKTS------------------RASDRSALGNLIRKH 1283

Query: 1313 ETAMTRCHWQIIQLVPSSQSGVFLAWVVVEGIMVRIPITVPRLFYLNSKDPIVEKFPG-- 1370
              +     W+I+Q  PS   GV   + +++  +  + + +P+   +N K    E FP   
Sbjct: 1284 VESYADKSWEILQCKPSIDLGVVEIYALIDRKIQLLKVNIPKTVLMNFK---TENFPSGG 1340

Query: 1371 ------RRVNKTLP-----HGRRSFNLIEVMIDEDQFRKESKKLAALLADPEVEVLGWQQ 1419
                   + N  LP     +   S  L ++ + ED +  E  K +++L +  V       
Sbjct: 1341 IENCIVEKSNAELPNVKGINNESSSQLFKLTMSEDTYFNEVNKASSVLNNENV------- 1393

Query: 1420 NAAKIGMQRCAASSQWFNERISLARYAHILWISDDGVPDLG 1460
                +G+   + SS   NER+ + R    +  S + +  LG
Sbjct: 1394 ----LGIYESSISS---NERV-IMRLGTCIQFSSEKMGALG 1426



 Score =  213 bits (541), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 160/633 (25%), Positives = 299/633 (47%), Gaps = 75/633 (11%)

Query: 1400 SKKLAALLADPEVEV---------LGWQQNAAKIGMQRCAASSQWFNERISLARYAHI-- 1448
            +K L  L A P VE+         L WQ    +  +    +   W +  I+L++Y++I  
Sbjct: 1571 AKLLQPLNAFPVVEIATAETHLPALNWQGQLMRKAVNHILSLGSWISNLITLSKYSNIPI 1630

Query: 1449 --------------------------LWISDDG-VPDLGGTSEE-----DECFADEVHQP 1476
                                      LW +D   +PD GG   +      E   D V  P
Sbjct: 1631 CNLKVDNLGYIIDLMYARQLKKNNIVLWWNDKSPLPDHGGVERDFDPRKAELMTDLVF-P 1689

Query: 1477 VLTYPGAYRKVSVELKIHHLSVNALLKSNQVNEMEGGGLFGFDQDMNSGPYNNELCGFDE 1536
            ++  P  Y  V  E+ +++  VN +L S  +NE EG  L        +     E  GF E
Sbjct: 1690 IMNNPDIYDDVIFEISVYNSVVNTVLSSTMLNEAEGTDL------AQNSTSKEESFGFVE 1743

Query: 1537 TTSSAPAFRVVKQLIQRCLTDAVTSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKV 1596
             + S+ A  V++ L++    DA+   N+ AD+++     W+ +P +KL D  L   +H +
Sbjct: 1744 DSFSSSALSVLRALLKELWDDAL-GDNITADSLVHAFIGWVYNPDAKLFDYALRYHIHTL 1802

Query: 1597 MQKVFAMLLAEFRKLGATIIFANFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIE 1656
             QK    L+ EF+  G+++IFA+ +K++I T K  +  + AY   L+KA++++ +F +++
Sbjct: 1803 TQKAVLQLINEFKLAGSSLIFADRNKLLIKTQKRSVENSYAYGQYLMKAIRSKPMFAYLD 1862

Query: 1657 LEPVHFWHSLLFMDQYNYGGIPARADESLDDD--SQVDIVSSWNIAEYLP----KEIQDH 1710
            L+   +W  L++MD+YNYGG   RA   ++D         S W+I ++LP    +E  D 
Sbjct: 1863 LKIDRYWDVLIWMDKYNYGG---RACLQIEDKEVQSFQAYSHWHIKDFLPAIYQQEFDDW 1919

Query: 1711 FVLVVSEFMYIPWKHAQKLAASRASLQEGSSCTPSITVAAAENFESHIVQYVKGEISSYF 1770
             V+++   +     + ++ A+++   Q      P  T+A ++  +S       G  +  F
Sbjct: 1920 LVVILDSMVKTKEAYHERNASTQRLTQ-----LPKNTLADSD-VDSQTDSL--GGFTHNF 1971

Query: 1771 TGKLLSIVRDAIHHMKKMNNDQHNSPGVMQ-TAANIHKV--DAPLEFIKHVCAAFALDQN 1827
            +  L+        + ++   D +     +  T    H V  +  LE +K++    +L  N
Sbjct: 1972 SKALIKRAEKLYKNQQEYILDPNFGKDYLSPTIPGSHLVVKNPLLELVKYLSHILSLSSN 2031

Query: 1828 VQHDVLVMRKNLLKYVRVREFAPEAEFRDPCPSFILPNVICSYCNDCRDLDLCRDMALLA 1887
               +   +RK LLK   +REF   AEF+DP  SF++P+ IC +C+   D+D+CR+   + 
Sbjct: 2032 HLLEGRALRKELLKTFEIREFDRLAEFKDPSTSFVIPSFICEHCSYISDIDICRES--ME 2089

Query: 1888 QDWHCAMPQCGQPYDREVMENALLQIVRQRERLYHLQDLVCIRCNQVKAAHLAEQCACAG 1947
            + + C    C +  ++ ++E  +++ ++ +   +  QD+ C +C+++K   ++  C C+G
Sbjct: 2090 RVFICQ--SCNRSLNKNLIEEHVIERLQAQVASFITQDVKCNKCHKIKEDAMSPYCPCSG 2147

Query: 1948 SFRCKEDASDFRSKMQIFLNIANRQGFQLLQEC 1980
             +        F +++QIF N+A    F+ L+E 
Sbjct: 2148 KWELAVSKESFMAQLQIFKNLAESFDFRTLKET 2180


>gi|170045261|ref|XP_001850234.1| DNA polymerase epsilon [Culex quinquefasciatus]
 gi|167868221|gb|EDS31604.1| DNA polymerase epsilon [Culex quinquefasciatus]
          Length = 2195

 Score = 1302 bits (3369), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 678/1442 (47%), Positives = 947/1442 (65%), Gaps = 75/1442 (5%)

Query: 7    DRQDGRRTKKQKLIRSAE-EELEAKLGYDLFSEGDKRLGWLLTFASSSLEDEDTRKVYSC 65
            +R DG  T +    +S E ++++ K G++   +  +R G+L+   S+ + ++D R++ + 
Sbjct: 14   ERTDGDDTNEIGYRQSKENDKIDLKYGFERVKDTQERTGYLVNMHSTEILNQD-RRLVAA 72

Query: 66   IDLYFVSQDGSTFKSKYKFRPYFYAATKEKMEMDVEAYLRRRYESQIADIEILEKEDLDL 125
            +DLYF+  DG+ +K    F PY    T+E   ++V  +L ++Y  Q+   E ++KEDLDL
Sbjct: 73   LDLYFLQMDGTRYKMTVVFAPYLLLITREGHALEVAKFLAKKYSGQLLRCEHVQKEDLDL 132

Query: 126  KNHLSGLHKSYLKISFDTVQQLMDVKKDLLHVVERNQAKFDAAEAY------ESILTGKR 179
             NHLSGL ++ LK++F    Q+  V+KDL   V +N+ + D A  Y       S+  G  
Sbjct: 133  PNHLSGLKQNLLKLTFANTGQMQKVRKDLAAAVRKNKER-DKANTYYMQMLSSSLAVGGE 191

Query: 180  EQ--------RPQDFLDCIVDLREYDVPYHIRFAIDNDVRCGQWYDVSISSTG--PLLEK 229
            E         + QDF + I+D+RE+DVPYH+R +ID ++ CG WY +        P++  
Sbjct: 192  EGEGSAVAGGQNQDFYESIMDMREHDVPYHVRVSIDLNIFCGLWYTMRCRGGDEPPIVTP 251

Query: 230  RVDLLQRAEVHVCAFDIETTKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIED 289
            R D+L R E  V AFDIETTKLPLKFPDA  D IMMISYM+DGQGYLI NRE +  D+ED
Sbjct: 252  RPDILDRPEPVVLAFDIETTKLPLKFPDAQTDQIMMISYMIDGQGYLITNREIISADVED 311

Query: 290  LEYTPKPEFEGYFKVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHH 349
             EYTPKPEFEG F V N  NE+ L++ +F H+ +VKP I+VTYNGD+FDWPF+ETRAA +
Sbjct: 312  FEYTPKPEFEGQFIVFNEPNEMGLIQRFFDHILDVKPHIFVTYNGDFFDWPFVETRAAVY 371

Query: 350  GFKMSEELGF-QCDKNQGECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPL 408
               M  E+GF + +   G    + A H+DC  WVKRDSYLP GSQGLKAV K+KL YDP+
Sbjct: 372  DLDMKREIGFSKTNARDGNYLCRPAMHMDCLCWVKRDSYLPVGSQGLKAVAKSKLRYDPV 431

Query: 409  EVNPEDMVRFAKEKPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGS 468
            E+ PEDM R A E+PQ++++YSVSDAVATYYLYM YVHPFIF+LATIIPM PDE+LRKGS
Sbjct: 432  ELEPEDMCRMAVEQPQVLSNYSVSDAVATYYLYMKYVHPFIFALATIIPMEPDEILRKGS 491

Query: 469  GTLCEMLLMVQAYKANVICPNKHQSDPEKFYRN-HLLESETYIGGHVECLESGVFRSDLP 527
            GTLCE LLM +A+  N++ PNK  S+  K   + H+L+ ETY+GGHVE LESGVFR+D+ 
Sbjct: 492  GTLCESLLMKEAFHVNIVYPNKQVSELNKLTPDGHVLDMETYVGGHVEALESGVFRADIA 551

Query: 528  TSFKLDPSAYEQLLNNLDRDLQYAIKVEGKMDLESVSNYDEVKNAIMEKLLRLQEEPIRE 587
            T F+LD    +QL  N+ + L++AI  E  + L+ V+N +EV   I   L +L + P R 
Sbjct: 552  TRFRLDQGMLKQLQGNVAKVLEHAIVTEEGVPLDQVTNLEEVTEQIKAALQQLHDTPTRI 611

Query: 588  ECPLIYHLDVAAMYPNIILTNRLQPPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEIFM 647
            E P+IYHLDV AMYPNIILTNRLQP S++++  C ACDFN+P   C R +EW+WRGE+  
Sbjct: 612  EQPVIYHLDVGAMYPNIILTNRLQPSSMISETDCAACDFNKPDARCKRDMEWMWRGEMLP 671

Query: 648  GKRSDYYHLKKQIESE-FVDGTNGHLSKSFLDLPKMEQQSRLKDRLKKYCQKAYKRVLDK 706
              R+++  +++Q+E+E F     G   ++F +L K +Q +  K RL  YC+KAYK+    
Sbjct: 672  ATRNEFQRIQQQLETEKFPPLFPGGPPRAFHELSKEDQANYEKKRLGDYCRKAYKKTKIT 731

Query: 707  PVTELREAGICMRENSFYVDTVRSFRDRRYEYKGLNKVWKGKLSEAKASGNSIKIQEAQD 766
             + E R + IC +ENSFYVDTVR+FRDRRYEYK L KV K  +S A  SG++ +I+ A+ 
Sbjct: 732  KL-ETRTSTICQKENSFYVDTVRAFRDRRYEYKALTKVAKASVSAALKSGDAGEIKAAKG 790

Query: 767  MVVLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKP 826
              VLYDSLQLAHKCILNSFYGYVMRKGARW+SM MAG+V  TGA II  AR +IE++G+P
Sbjct: 791  REVLYDSLQLAHKCILNSFYGYVMRKGARWHSMSMAGIVCLTGANIITKAREIIERVGRP 850

Query: 827  LELDTDGIWCVLPGSFPENFTFKTKDLKK-KLTISYPCVMLNVDVARNNTNDQYQTLVDP 885
            LELDTDGIWC+LP SFP+ FT  TK  KK KL +SYP  +LN  V  + TN+QY  L  P
Sbjct: 851  LELDTDGIWCILPASFPQEFTVLTKHPKKGKLNVSYPNAVLNTMVKDHFTNEQYHVLEKP 910

Query: 886  VS----KTYETHSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFE 941
                    Y    E SI FEVDGPY AM+LPA+KEEG  +KKRYAVFN DG+LAELKGFE
Sbjct: 911  YKDGSPAEYSIQPENSIFFEVDGPYLAMVLPAAKEEGKKLKKRYAVFNFDGSLAELKGFE 970

Query: 942  IKRRGELKLIKVFQAELFDKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDY 1001
            +KRRGEL+LIK+FQ+ +F+ FL GST+E+CY++VA +A+ WLD+L ++G ++ DSEL + 
Sbjct: 971  VKRRGELQLIKIFQSSVFEAFLQGSTLEQCYASVAKIADYWLDVLYSKGHNMPDSELFEL 1030

Query: 1002 ISESSTMSKSLADYGEQKSCAVTTARRLSDFLGDTMVKDKGLRCQYIVACEPQGTPVSER 1061
            ISE+ +MS+ L DYG QKS +++TA+RL++FLGD MVKD GL C++I++ +P G PV+ER
Sbjct: 1031 ISENRSMSRKLEDYGAQKSTSISTAKRLAEFLGDQMVKDAGLACKFIISRKPDGAPVTER 1090

Query: 1062 AVPVAIFETDAEIMKFYLRKWCK--TSSDVGIRSIVDWSYYKQRLSSAIQKIITIPAAMQ 1119
            A+P+AIF+++  + + YLR+W K  T  D  IR ++DW YY +RL   IQKIITIPAA+Q
Sbjct: 1091 AIPLAIFQSEPSVRRHYLRRWLKDNTMGDADIRDVLDWQYYIERLGGTIQKIITIPAALQ 1150

Query: 1120 KVSNPVPRVVHPDWLYKKVREKEDKFRQRKLVDIFSSLKKDDFLNKTCNAETNLMDENVE 1179
             ++NPVPRV HPDWL+KK+ EK D  +QR++ ++F + +K                  + 
Sbjct: 1151 GLNNPVPRVQHPDWLHKKMLEKNDTLKQRRISEMFVAKEK----------------PAMA 1194

Query: 1180 DLEDFPKKRRNSVNGPR-PIVRCFEVNNEQKTVKTTDQVDSLRQQLEPSE--VSDQQPSS 1236
            D+ED  +       GPR P V    VN++++ V ++++        +PS+  V+     +
Sbjct: 1195 DIEDLGR-------GPRSPSVGLPIVNSKRRRVPSSEEP-------QPSQEAVAKTWKEA 1240

Query: 1237 QNAIDTENIDRIVDYKGWLELKKRKWKDNLDRRKKQKLGSLRASH---QANGVSESLGDM 1293
              A       R  + + WL   K+KWK  L +R K +  S + S    + + ++ S G M
Sbjct: 1241 LGAPPPPGTTR-AELQEWLRFHKKKWKWLLAQRSKHRDPSSKRSRRDDEESQLASSSGTM 1299

Query: 1294 INHKEAQRRTGVGSYFRRQETAMTRCHWQIIQLVPSSQSGVFLAWVVVEGIMVRIPITVP 1353
                  +    +G + R+ + ++    WQ+IQ++ + + G F  W +V   + +I + +P
Sbjct: 1300 ------RPVATLGGFLRKTQRSLIEQPWQVIQVIATDEMGHFTIWAMVGEELHKIRLLIP 1353

Query: 1354 RLFYLNSKDPIV--EKFPGRRVNKTLPHGRRSFNLIEVMIDEDQFRKESKKLAALLADPE 1411
            R+FY+N + P    E    ++V++ LP  R   +L + ++ E  FR     + A LA P+
Sbjct: 1354 RIFYVNQRTPAPPEEGSMWKKVHRILPRARPVCHLYQYVVPEQVFRDNRLGMLADLATPD 1413

Query: 1412 VE 1413
            +E
Sbjct: 1414 IE 1415



 Score =  274 bits (701), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 180/574 (31%), Positives = 279/574 (48%), Gaps = 86/574 (14%)

Query: 1442 LARYAHILWISDDGVPDLGGTSEEDECFADEVH---QPVLTYPGAYRKVSVELKIHHLSV 1498
            L +   ILW S    PDLGG   +D     E       V    G Y  V VEL I  L+V
Sbjct: 1679 LLKSNFILWWSPSSRPDLGGREADDSRLLAEFEDNISVVQNRSGFYGTVCVELSIESLAV 1738

Query: 1499 NALLKSNQVNEMEGGG-LFGFD-------QDM--NSGPYNNELCGFDETTSSAPAFRVVK 1548
            +ALL++ +V EMEG      FD        DM  N G     L  +DET   + AFRV++
Sbjct: 1739 SALLQAGKVQEMEGASSAITFDVIPQASLDDMISNQGGVQT-LPSYDETALCSQAFRVMR 1797

Query: 1549 QLIQRCLTDAVTSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEF 1608
             ++   L +   + N+F+D  + H YRW+ S  + L+DP L R L+ +M+K+F  ++AEF
Sbjct: 1798 SMVNGWLREVSINRNIFSDFQIIHFYRWVRSSKALLYDPALRRALNTLMRKLFLQIIAEF 1857

Query: 1609 RKLGATIIFANFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLF 1668
            ++L A II+A+F++++I+TGK  +  A AY D ++++++ +ELF  + L     W  LL+
Sbjct: 1858 QRLKAEIIYADFNRIVINTGKKAVMDAIAYTDYVVQSIRNKELFHSVSLSYQQSWEFLLW 1917

Query: 1669 MDQYNYGGIPARADESLDDD-------SQVDIVSSWNIAEYLPKEIQDHFVLVVSEFMYI 1721
            +D  N+GGI        D+D        ++ +  SWNIAE LP+E               
Sbjct: 1918 IDSSNFGGIRGNPQTGNDEDVPQADEPEELSLEMSWNIAEQLPEE--------------- 1962

Query: 1722 PWKHAQKLAASRASLQEGSSCTPSITVAAAENFESHIVQYVK----GEISSYFTGKLLSI 1777
                               +C           FE  +++Y++    G  +     KL  +
Sbjct: 1963 ------------------GNCRVY--------FEQFLIKYLESLADGVAAQKTIKKLSHV 1996

Query: 1778 VRDAIHHMKKMNNDQHNSPGVMQTAANIHKVDAPLEFIKHVCAAFALDQNVQHDVLVMRK 1837
              D +  M K        P               LEFIK +C   A+++ +  ++  +R+
Sbjct: 1997 AYDMVQKMHKNYGRGKEGPA--------------LEFIKALCKVLAVNKEIDEELTTLRR 2042

Query: 1838 NLLKYVRVREFAPEAEFRDPCPSFILPNVICSYCNDCRDLDLCRDMALLAQD----WHCA 1893
            N+L  V + +F+ +A ++DP  S++L  VIC  CN CRDLDLC+D     +D    W CA
Sbjct: 2043 NMLLLVGIGDFSDKAVWKDPLRSYVLAEVICKACNHCRDLDLCKDNHRALKDGLPVWLCA 2102

Query: 1894 MPQCGQPYDREVMENALLQIVRQRERLYHLQDLVCIRCNQVKAAHLAEQCACAGSFRCKE 1953
              QC   YD   +E  LL +V+++   Y LQDL C RC Q+K  ++A+ C CAG+F    
Sbjct: 2103 --QCNVDYDNVDIEMRLLDVVQRKMMSYTLQDLRCNRCRQIKRENIAQFCPCAGAFENLI 2160

Query: 1954 DASDFRSKMQIFLNIANRQGFQLLQECTSWILEV 1987
             A + R  +  FL +A+     LL+E    +L+ 
Sbjct: 2161 SAGELRRLLGTFLTVADDHRMPLLKETIEHVLKT 2194


>gi|302915653|ref|XP_003051637.1| predicted protein [Nectria haematococca mpVI 77-13-4]
 gi|256732576|gb|EEU45924.1| predicted protein [Nectria haematococca mpVI 77-13-4]
          Length = 2818

 Score = 1302 bits (3369), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 674/1415 (47%), Positives = 925/1415 (65%), Gaps = 73/1415 (5%)

Query: 27   LEAKLGYDLFSEGDKRLGWLLTFASSSLEDEDTRKVYSCIDLYFVSQDGSTFKSKYKFRP 86
            ++  +G+  +  G K+ GWL+    +S+EDE      + +D YF+ +DGSTFK+  ++ P
Sbjct: 53   IDENMGFGRYESGKKKEGWLVNIQPTSIEDERIPGGRAAVDCYFIEEDGSTFKATVEYDP 112

Query: 87   YFYAATKEKMEMDVEAYLRRRYESQIA-DIEILEKEDLDLKNHLSGLHKSYLKISFDTVQ 145
            YF  A ++  E +VE + +R     +   I  +EK+DL++ NHL G  +++L++ F  V 
Sbjct: 113  YFLIAVRKGHESEVEEWAKRVPGGGVVKSIRRVEKDDLNMPNHLVGYRRTFLELRFANVN 172

Query: 146  QLMDVKKDLLHVVERNQAKFDAAEAYESILTGKREQRP----------------QDFLDC 189
             L+  +KD++ + E+N+   +A +AY  +                          D  D 
Sbjct: 173  DLLAARKDIMPIAEKNKKNMNAMDAYAEVAAAANGDFDLFDDSRDDDRQMNNAFTDASDF 232

Query: 190  IVDLREYDVPYHIRFAID--NDVRCGQWYDVSISSTGPLLEKRVDLLQRAEVHVCAFDIE 247
            IVD+REYDVPYH+R  ID   D+R G WY V        +         A+  V A+DIE
Sbjct: 233  IVDIREYDVPYHVRVMIDMVADIRVGTWYFVEAKHGVTKISPNDTRSLPADPVVMAYDIE 292

Query: 248  TTKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNV 307
            T+K PLKFPDA  D I+MISYM+DGQG+LI NR  + EDI D +YTPKPE+ G F + N 
Sbjct: 293  TSKAPLKFPDAAVDQIIMISYMIDGQGFLITNRTILSEDIGDFDYTPKPEYPGPFMIFNE 352

Query: 308  NNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDKNQGE 367
             +E  ++  +F H++E +P +  TYNGD+FDWPF+E RA+ +G  M  E+G++ D ++ +
Sbjct: 353  PDEKAVIERFFLHIKEARPTVIATYNGDFFDWPFVEARASVNGIDMYHEIGWKKD-SEDQ 411

Query: 368  CRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQMMA 427
             +  ++ H+DCF WV RDSYLPQGS+GLKAVT AKLGYDP E++PE M  +A E+PQ +A
Sbjct: 412  YKCNYSVHMDCFHWVNRDSYLPQGSRGLKAVTVAKLGYDPDELDPELMTPYASERPQTLA 471

Query: 428  SYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVIC 487
             YSVSDAVATYYLYM YVHPFIFSL TI+P+  D+VLRKG+GTLCEMLLMVQAY+  ++ 
Sbjct: 472  EYSVSDAVATYYLYMKYVHPFIFSLCTILPLGGDDVLRKGTGTLCEMLLMVQAYQREIVL 531

Query: 488  PNKHQSDPEKFYRNHLLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQLLNNLDRD 547
            PNK+ +  E F+  HLL+SETY+GGHVE +E+GVFR+D+P  F ++PSA ++LL +LD  
Sbjct: 532  PNKYITPKEAFWDGHLLDSETYVGGHVESIEAGVFRADIPVDFAVEPSAIDELLKDLDAA 591

Query: 548  LQYAIKVEGKMDLESVSNYDEVKNAIMEKLLRLQEEPIREECPLIYHLDVAAMYPNIILT 607
            L++ I+VE     + V NYDEVK  I+E+L +L+E P R E PLIYHLDVA+MYPNI+ T
Sbjct: 592  LRFVIEVEENKKFDDVENYDEVKAQIVERLNKLKETPNRNERPLIYHLDVASMYPNIMTT 651

Query: 608  NRLQPPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYYHLKKQIESEFVDG 667
            NRLQP S++ +  C ACDFNRPGKTC R++ W WRGE    KR +Y  ++  +E+E   G
Sbjct: 652  NRLQPDSMIKEADCAACDFNRPGKTCDRRMPWAWRGEYIPAKRDEYNMIRHALENERFPG 711

Query: 668  TNGHL-SKSFLDLPKMEQQSRLKDRLKKYCQKAYKRVLDKPVTELREAGICMRENSFYVD 726
             + +   ++F +L   EQ   ++ RL+ Y QK Y ++ D   T +REA IC REN FY++
Sbjct: 712  KHPNAPQRTFQELSADEQAGLIRKRLQLYSQKVYHKIHDS-TTIVREAIICQRENPFYIN 770

Query: 727  TVRSFRDRRYEYKGLNKVWKGKLSEAKASGNS-IKIQEAQDMVVLYDSLQLAHKCILNSF 785
            TVR FRDRRY+YKG  KVWKGK S  ++SG S  +++ A+ M+VLYDSLQLAHK ILNSF
Sbjct: 771  TVRDFRDRRYDYKGKAKVWKGKTSSLQSSGASPSEVEAAKKMIVLYDSLQLAHKVILNSF 830

Query: 786  YGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLPGSFPEN 845
            YGYVMRKG+RWYS+EMAGV   TGA IIQ AR L+E++G+PLELDTDGIWC+LP +FPEN
Sbjct: 831  YGYVMRKGSRWYSLEMAGVTCLTGAHIIQMARSLVERLGRPLELDTDGIWCMLPATFPEN 890

Query: 846  FTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEFEVDGP 905
            F+FK K   KKL ISYPCVMLN  V    TN QYQTLVD  +  YETHS+ SI FEVDGP
Sbjct: 891  FSFKMKG-GKKLNISYPCVMLNHLVHAKFTNHQYQTLVDKKTLKYETHSDNSIFFEVDGP 949

Query: 906  YKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFLHG 965
            YKAM+LP SKEE   +KKRYAVFNDDG+LAELKGFE+KRRGELKLIK+FQ ++F  FL G
Sbjct: 950  YKAMVLPTSKEEDKNLKKRYAVFNDDGSLAELKGFEVKRRGELKLIKIFQQQIFKFFLEG 1009

Query: 966  STIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLADYGEQKSCAVTT 1025
            +T+ ECY+AVA VANRWLD+L ++G  +AD EL++ ISE+ +MSK+L +YG QKS ++TT
Sbjct: 1010 TTLAECYAAVAKVANRWLDVLHSKGTTLADEELMELISENRSMSKTLEEYGSQKSTSITT 1069

Query: 1026 ARRLSDFLGDTMVKDKGLRCQYIVACEPQGTPVSERAVPVAIFETDAEIMKFYLRKWCKT 1085
            A+RL+DFLG+ MVKDKGL C++I+   P+  PV+ERAVPVAIF  +  + + YL+KW K 
Sbjct: 1070 AKRLADFLGEGMVKDKGLNCKFIICARPKNAPVTERAVPVAIFSAEESVKRTYLKKWLKE 1129

Query: 1086 S-SDVGIRSIVDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLYKKVREKEDK 1144
              +D   R+++DW YY +RL S IQK+ITIPAA+QKV NPVPRV HPDWL +++  K+DK
Sbjct: 1130 EPADTDPRALLDWDYYLERLGSVIQKLITIPAALQKVRNPVPRVPHPDWLQRRINIKDDK 1189

Query: 1145 FRQRKLVDIFSSLKKDDFLNKTCNAETNLMDENVEDLEDFPKKRRNSVNGPRPIVRCFEV 1204
             +Q+KL D+F     +D         TN+    + DLEDF     N +  P+ +      
Sbjct: 1190 MKQKKLTDLFKKSPLEDI--------TNINGTQMNDLEDF----GNKLLKPKSVSSAVAA 1237

Query: 1205 NNEQKTVKTTDQVDSLRQQLEPSEVSDQQPSSQNAIDTENIDRIVDYKGWLELKKRKWKD 1264
            +    TV+        R+  EP+E  D   +    + + +     DY+ +L  +K+KWK 
Sbjct: 1238 SQAATTVQK-------RKSPEPAENPDPMAALPKVMPSPS----EDYEAFLMYQKKKWKL 1286

Query: 1265 NLDRR-KKQKLGSLRASHQANGVSESLGDMINHKEAQRRTGVGSYFRRQETAMTRCHWQI 1323
                R ++++L   R  H  N + ++                   F +Q       +WQ+
Sbjct: 1287 QKQARIRRRQLFGDRRGHAGNNIQQT-------------------FMKQAHVTYMNNWQV 1327

Query: 1324 IQLVPSSQSGVFLAWVVVEGIMVRIPITVPRLFYLNSK-----DPIVEKFPGRRVNKTLP 1378
            + L  +   G+  A V+++  +  + I VPR  +LN K     D  V+     +VN TLP
Sbjct: 1328 LHLKATDTPGIVTAHVLIDAKIHTLKINVPRQVFLNLKSKDLPDVEVDGCEVEQVNYTLP 1387

Query: 1379 HGRRSFNLIEVMIDEDQFRKESKKLAALLADPEVE 1413
            +G  S +L ++ + ED +  ES+K + L   P VE
Sbjct: 1388 NGHPSSHLFKLTVPEDIYFNESEKFSLLFNHPSVE 1422



 Score =  252 bits (644), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 170/614 (27%), Positives = 281/614 (45%), Gaps = 69/614 (11%)

Query: 1408 ADPEVEVLGWQQNAAKIGMQRCAASSQWFNERISLARYAHI------------------- 1448
            AD  +  LGWQ   AK  +        W     +LARY  +                   
Sbjct: 1619 ADSSLPPLGWQSVIAKRLVGHYLGLGSWILHLTALARYGDVPLCNLERDDPRFLIDVAYA 1678

Query: 1449 ---------LWISDDGVPDLGGTSEEDECFA-DEVHQPVLTYPGAYRKVSVELKIHHLSV 1498
                     LW S    PD  G  ++D     D V  P +  PG +  V +++ + +L++
Sbjct: 1679 RRLQANGVVLWWSPGSRPDHAGYEKDDLLGPLDNVKMPSVNNPGTFSSVCIDIDVRNLAI 1738

Query: 1499 NALLKSNQVNEMEGGGLFGFDQDMNSGPYNNELCGFDETTSSAPAFRVVKQLIQRCLTDA 1558
            N +L S+ +NE+EG     F          N      ET +S  AF     L+ R +  A
Sbjct: 1739 NTILTSSLINELEGADSVSF----------NPAADDSETLTSESAFANAGVLVLREMVKA 1788

Query: 1559 ----VTSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEFRKLGAT 1614
                   G+  AD ++QHL RW+ +P S ++D  LH  +  + +K F  L+A+FR++G+ 
Sbjct: 1789 WWAEACRGSTMADVLVQHLVRWVENPDSFMYDRALHYYVQMMSRKAFQQLMADFRRVGSQ 1848

Query: 1615 IIFANFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLFMDQYNY 1674
            ++FAN +++I+ T K ++  A AY   ++K+++++ LF +I+LE   +W  L++ D++NY
Sbjct: 1849 VVFANANRLILQTTKAEVGNAYAYSQYIIKSIKSKPLFHFIDLEIKEYWDYLVWYDEFNY 1908

Query: 1675 GGIPARADESLDDDSQ-VDIVSSWNIAEYLPKEIQDHFVLVVSEFMYIPWKHAQKLAASR 1733
            GG      E ++ + Q ++ V +W +A +LP  +Q  F   V EF+        +L    
Sbjct: 1909 GG--KACQEVIEAEEQNLETVMNWQMATFLPVRLQPTFQDWVIEFI--------QLMHQL 1958

Query: 1734 ASLQEG-SSCTPSITVAAAENFESHIVQYVKGE-ISSYFTGKLLSIV----RDAIHHMKK 1787
               Q G    TP +T   ++  E+H  Q + G+         +L ++    R+ +H    
Sbjct: 1959 KRPQNGDPDATPQLTQLPSKGLENHEGQIILGKTFEKPLKKDILGLINKQKRELLHPELA 2018

Query: 1788 MNNDQHNSPGVMQTAANIHKVDAPLEFIKHVCAAFALDQNVQHDVLVMRKNLLKYVRVRE 1847
             +    + PG   T  N       LE +K +    +LD+N+  +  ++RK LL    VRE
Sbjct: 2019 EDYSFPSLPGSHLTPRN-----PILELVKSLMQVLSLDKNITLEARLLRKELLALFEVRE 2073

Query: 1848 FAPEAEFRDPCPSFILPNVICSYCNDCRDLDLCRDMALLAQD--WHCAMPQCGQPYDREV 1905
            F+ +  F +P  S  L  V C  C   RDLDLCRD  L  +   W C    CG  +DR  
Sbjct: 2074 FSKDGTFTNPSESLRLLQVSCDSCTMARDLDLCRDEDLFGEGTAWRCGF--CGSEFDRVA 2131

Query: 1906 MENALLQIVRQRERLYHLQDLVCIRCNQVKAAHLAEQCACAGSFRCKEDASDFRSKMQIF 1965
            +E  LL +V      +  QDL C+RC  ++     E C C+G ++      D   K+ + 
Sbjct: 2132 IEERLLGMVESWVVEWTTQDLKCVRCGALRLNDFMEHCTCSGEWKEIVSRQDVSKKLGVM 2191

Query: 1966 LNIANRQGFQLLQE 1979
              +A   G ++L +
Sbjct: 2192 RRVAKFYGLRMLSD 2205


>gi|19113146|ref|NP_596354.1| DNA polymerase epsilon catalytic subunit Pol2 [Schizosaccharomyces
            pombe 972h-]
 gi|3913534|sp|P87154.1|DPOE_SCHPO RecName: Full=DNA polymerase epsilon catalytic subunit A; AltName:
            Full=DNA polymerase II subunit A
 gi|2104462|emb|CAB08772.1| DNA polymerase epsilon catalytic subunit Pol2 [Schizosaccharomyces
            pombe]
          Length = 2199

 Score = 1301 bits (3366), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 669/1404 (47%), Positives = 894/1404 (63%), Gaps = 76/1404 (5%)

Query: 24   EEELEAKLGYDLFSEGDKRLGWLLTFASSSLEDEDTRKVYSCIDLYFVSQDGSTFKSKYK 83
            + E++  +G+D +  G  R  WLL    + +E        S +D YF+  DG TF+    
Sbjct: 51   KNEIDRMMGFDSYEGGQPREAWLLNVHPTVIESTKGNSTLSAVDFYFIQDDGDTFRCTIP 110

Query: 84   FRPYFYAATKEKMEMDVEAYLRRRYESQIADIEILEKEDLDLKNHLSGLHKSYLKISFDT 143
            + PYFY A +E  E  V+ YL++++   I     + KEDL LKNH+ G  K Y+K+ FD 
Sbjct: 111  YSPYFYIAAREGKEALVDDYLKKKFVGLIKSTTRIFKEDLQLKNHIVGYQKLYIKLVFDN 170

Query: 144  VQQLMDVKKDLLHVVERNQAKFDAAEAYESI----LTGKREQRPQDFLDCIVDLREYDVP 199
            +  L  V+K L+  V+ N ++ DA +AY ++    L G  E   +D L+ ++D+REYDVP
Sbjct: 171  LNDLQAVRKSLMSAVKANSSQQDAVDAYTNLSSENLNGIIENAFEDPLNHVLDIREYDVP 230

Query: 200  YHIRFAIDNDVRCGQWYDVSISSTGPLLEKRVDLLQRAEVHVCAFDIETTKLPLKFPDAD 259
            YH R  ID ++R GQWY VS       +      ++RAE  + AFDIETTKLPLKFPD+ 
Sbjct: 231  YHSRTLIDLNIRVGQWYTVSYHEGHVQISLLASRIERAEPTIMAFDIETTKLPLKFPDSS 290

Query: 260  YDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNVNNEIELLRLWFA 319
            +D IMMISYM+DGQG+LI NRE + ++IED  YTP+ EFEG F + N  +E+ LL  +F 
Sbjct: 291  FDKIMMISYMIDGQGFLITNREIISQNIEDFHYTPREEFEGPFIIFNEPDEVGLLHRFFK 350

Query: 320  HMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDKNQGECRAKFACHLDCF 379
            H++  KP + VTYNGD+FDWPF++ RAA HG  ++EE GF  D  + E ++ +  H+D F
Sbjct: 351  HIRSAKPSVIVTYNGDFFDWPFVDARAAFHGLNLTEETGFFRDA-EDEYKSSYCSHMDAF 409

Query: 380  AWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQMMASYSVSDAVATYY 439
             WVKRDSYLPQGSQGLKAVT +KLGY+P+E++PE M  +A EKPQ++A YSVSDAVATY+
Sbjct: 410  RWVKRDSYLPQGSQGLKAVTVSKLGYNPIELDPELMTPYASEKPQVLAQYSVSDAVATYF 469

Query: 440  LYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVICPNKHQSDPEKFY 499
            LYM YVHPFIFSL  IIP++PDEVLRKG+GTLCE LL V+A   N+I PNKH    +KF+
Sbjct: 470  LYMKYVHPFIFSLCNIIPLNPDEVLRKGTGTLCETLLTVEACTKNIILPNKHVDASQKFF 529

Query: 500  RNHLLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQLLNNLDRDLQYAIKVEGKMD 559
              HLL SETY+GGHVE LESGVFRSDLPT+F +DP  YE+L+  LD+ L +++ VE  ++
Sbjct: 530  DGHLLASETYVGGHVESLESGVFRSDLPTNFNMDPKVYEELILQLDKALDFSLTVENNVN 589

Query: 560  LESVSNYDEVKNAIMEKLLRLQEEPIREECPLIYHLDVAAMYPNIILTNRLQPPSIVTDE 619
            ++ + NY+EV+++I++KL  L++ P R E P IYHLDVA+MYPNI++TNRLQP S+  + 
Sbjct: 590  VDEIENYEEVRDSILKKLSDLRDRPKRSEKPRIYHLDVASMYPNIMITNRLQPDSVKDES 649

Query: 620  VCTACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYYHLKKQIESE-FVDGTNGHLSKSFLD 678
             C  CD N P KTC R++ W WRGE +  K+ +Y+ +   ++SE F   T     +SF +
Sbjct: 650  FCATCDLNVPNKTCDRRMVWAWRGEYYPAKKGEYHMIYSALQSERFPGPTPFSPFRSFQE 709

Query: 679  LPKMEQQSRLKDRLKKYCQKAYKRVLDKPVTELREAGICMRENSFYVDTVRSFRDRRYEY 738
            L   EQ + ++ R+  Y +K Y R+ D  V E RE  IC +ENSFY+DTV+SFRDRRY++
Sbjct: 710  LSPSEQAAMVQKRIADYSRKVYHRLYDNTVIE-RETIICQKENSFYIDTVKSFRDRRYDF 768

Query: 739  KGLNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHKCILNSFYGYVMRKGARWYS 798
            KGL K W  +L+  K  G   +I+EA+ MVVLYDSLQLAHK ILNSFYGYVMRKG+RWYS
Sbjct: 769  KGLQKKWVKQLAAIKEKGGLAEIEEAKKMVVLYDSLQLAHKVILNSFYGYVMRKGSRWYS 828

Query: 799  MEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLPGSFPENFTFKTKDLKKKLT 858
            +EMAG+   TGA IIQ AR ++E+ G+PLELDTDGIWC+LP SFPENF FK K    K+ 
Sbjct: 829  IEMAGITCLTGATIIQMARQIVERAGRPLELDTDGIWCILPESFPENFEFKKKS-GGKVF 887

Query: 859  ISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEFEVDGPYKAMILPASKEEG 918
            ISYPCVMLN  V    TN QY  L DP    YET SE SI FEVDGPY+AMILPAS EEG
Sbjct: 888  ISYPCVMLNHLVHEKFTNHQYSALKDPEKLVYETTSENSIFFEVDGPYRAMILPASTEEG 947

Query: 919  ILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFLHGSTIEECYSAVAAV 978
              +KKRYAVFN DG+LAELKGFE+KRRGELKLIK FQ+++F  FL G ++EECY  VA V
Sbjct: 948  KNLKKRYAVFNFDGSLAELKGFEVKRRGELKLIKDFQSQIFKVFLKGDSLEECYQEVAYV 1007

Query: 979  ANRWLDLLDNQGKDIADSELIDYISESSTMSKSLADYGEQKSCAVTTARRLSDFLGDTMV 1038
            A+ WL++L  +G ++ D ELI+ ISE+ +MSK+L++YG QKS ++TTARRL+DFLGD M 
Sbjct: 1008 ADTWLEILFTKGSNLTDDELIELISENRSMSKALSEYGSQKSTSITTARRLADFLGDQMT 1067

Query: 1039 KDKGLRCQYIVACEPQGTPVSERAVPVAIFETDAEIMKFYLRKWCKTSS--DVGIRSIVD 1096
            KDKGL C++I++  P+G PV+ERAVPVAIF  +  + + +LR W K +   DV IR I+D
Sbjct: 1068 KDKGLACRFIISASPKGRPVAERAVPVAIFFAEESVKRHFLRLWLKDNGLYDVDIRDIID 1127

Query: 1097 WSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLYKKVREKEDKFRQRKLVDIFSS 1156
            W YY +RL S +QK+I+IPAA+Q++SNPV R   PDWL K+V     K++Q+K+  IFS 
Sbjct: 1128 WDYYLKRLGSVVQKLISIPAALQRISNPVTRFPLPDWLQKRVAVLNSKYQQKKIDSIFS- 1186

Query: 1157 LKKDDFLNKTCNAETNLMDENVEDLEDFPKKRRNSVNGPRPIVRCFEVNNEQKTVKTTDQ 1216
                  L  T  +  N  +  V D+ED                    V ++ K +     
Sbjct: 1187 ------LAPTNPSTIN--NTKVTDIEDLG-----------------SVTHKDKRIVARVT 1221

Query: 1217 VDSLRQQLEPSEVSDQQPSSQNAIDTENIDRIVDYKGWLELKKRKWKDNLDRRKKQKLGS 1276
               L QQ   SE     P S    + + +  +  Y  WL+  K+KW       K QK   
Sbjct: 1222 KRKLLQQSGNSEA----PVS---FEVKPVSFMDGYSNWLKYAKKKW-------KYQKQVK 1267

Query: 1277 LRASHQANGVSESLGDMINHKEAQRRTGVGSYFRRQETAMTRCHWQIIQLVPSSQSGVFL 1336
            LR  H     S    +++               +     M    W I+Q+  +   G+  
Sbjct: 1268 LRRRHLIGFQSRQFTNVL---------------QSSAEVMFENLWHILQIRETDVPGILH 1312

Query: 1337 AWVVVEGIMVRIPITVPRLFYLNSKDPIVEKFPGRRV--------NKTLPHGRRSFNLIE 1388
            AWV++   +  I   V R F++  KD   E  P   +        N  LPHG  S  L  
Sbjct: 1313 AWVIIRNRLTSIRFIVNRKFFVCFKD---ETLPNVEIEGCLIEKSNAILPHGSTSDKLFL 1369

Query: 1389 VMIDEDQFRKESKKLAALLADPEV 1412
            + I E  +  E   ++ + A P V
Sbjct: 1370 LEIPEKSYLTEKVSISMIFAHPSV 1393



 Score =  249 bits (635), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 174/623 (27%), Positives = 295/623 (47%), Gaps = 62/623 (9%)

Query: 1412 VEVLGWQQNAAKIGMQRCAASSQWFNERISLARYAHI----------------------- 1448
            ++ L W+Q+ A   +Q   A   W   RI L+R++ I                       
Sbjct: 1590 IQSLSWKQHIATKMIQHFLAIGSWLFHRIQLSRFSDIPLCNFESDDIQYSIDVVYSRKLK 1649

Query: 1449 -----LWISDDGVPDLGGTSEEDECFADEVHQPV-LTYPGAYRKVSVELKIHHLSVNALL 1502
                 LW +    PDLGG  ++          P+ +  PGAY    V++ + +L++ ++L
Sbjct: 1650 EHNIILWWNKGPTPDLGGIEKDSILQIASPKDPLEVNNPGAYSNACVDISLSNLALCSIL 1709

Query: 1503 KSNQVNEMEGGGLFGFDQDMNSGPYNNEL---CGFDETTSSAPAFRVVKQLIQRCLTDAV 1559
             S  +N++EG G      D      N++L    G  +      +  V+K L++    +A 
Sbjct: 1710 NSALINDIEGIGDMAALNDNYMTAINDDLEEKLGIHDNIGLTHSLPVLKALVKTWWNEA- 1768

Query: 1560 TSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEFRKLGATIIFAN 1619
             SGN  AD I+QHL RW+ S  S L+ P+L   +  +M+K F  LL+E ++LGA II A+
Sbjct: 1769 ASGNNLADLIIQHLARWISSSKSYLYSPLLSSHVEVIMRKTFLQLLSEIKRLGAHIIHAS 1828

Query: 1620 FSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLFMDQYNYGGIPA 1679
             +K++I T K  +  A  Y + LLK+++T  LF +++L    +W  LL+MD  NYGG   
Sbjct: 1829 ANKILIKTSKLIVQNAVTYSNYLLKSIKTLPLFHFLDLNVTEYWDYLLWMDSVNYGGKMV 1888

Query: 1680 RADESLDDDSQVDIVSSWNIAEYLPKEIQDHFVLVVSEFMYIPWKHAQKLAASRASLQ-- 1737
             A+ S  ++    +V SW+I  +LP  IQ  F   + EF+   +K  QKL  S   +   
Sbjct: 1889 AANFSATNEEPQTVV-SWHIKSHLPPIIQPEFQSWIVEFIEEVYK--QKLEKSNTKVGFV 1945

Query: 1738 --EGSSCTPSITVAAAENFESHIVQYVKGEISSYFTGKLLSIVRDAIHHMKKMNNDQHNS 1795
              + ++      +  +   +S ++  +K +++          VR     ++   N + + 
Sbjct: 1946 RVKNNNADEDSEIVGSGILKSKLIHPLKRKVAQ---------VRRCFQELQLDENTREDL 1996

Query: 1796 PGVMQTAANIHKVDAPLEFIKHVCAAFALDQNVQHDVLVMRKNLLKYVRVREFAPEAEFR 1855
                   + ++  D  LE +K +CA F L  ++  +V  ++K+LL  ++++EF+ +A FR
Sbjct: 1997 KFPKLPGSFLNYTDGALELVKSICAVFELSHDLNLEVRFLKKSLLSLLQIQEFSTQAVFR 2056

Query: 1856 DPCPSFILPNVICSYCNDCRDLDLC---------RDMALL--AQDWHCAMPQCGQPYDRE 1904
             P     L  + C  C   +D DLC          DM  L  +  W C+   C   YDR 
Sbjct: 2057 YPSRRLSLDQIPCKQCGVHQDFDLCLHEHLWPTRDDMGTLVFSDGWSCS--SCNLVYDRW 2114

Query: 1905 VMENALLQIVRQRERLYHLQDLVCIRCNQVKAAHLAEQCACAGSFRCKEDASDFRSKMQI 1964
            V E  L+  +  +  LY LQDL+C +C  VK   L E+C+C+G +  +   + FR  + +
Sbjct: 2115 VFEETLVDNLYHQLTLYQLQDLICSKCKTVKQWSLKERCSCSGEWVLQLSPTKFREMLNV 2174

Query: 1965 FLNIANRQGFQLLQECTSWILEV 1987
            + ++A+   F +LQ     IL V
Sbjct: 2175 YQSVADFYEFSILQNSVQSILSV 2197


>gi|346326771|gb|EGX96367.1| DNA polymerase epsilon [Cordyceps militaris CM01]
          Length = 2213

 Score = 1300 bits (3365), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 670/1433 (46%), Positives = 919/1433 (64%), Gaps = 86/1433 (6%)

Query: 13   RTKKQKLIRSAEEELEAKLGYDLFSEGDKRLGWLLTFASSSLEDEDTRKVYSCIDLYFVS 72
            R ++ KL ++ +E     +G+  +  G ++ GWL+    +++ED+      + +D YF+ 
Sbjct: 43   RWERAKLAQTIDE----NMGFGRYESGKRKEGWLVNVQPTAIEDDKAPAGRAALDCYFIE 98

Query: 73   QDGSTFKSKYKFRPYFYAATKEKMEMDVEAYLRR-RYESQIADIEILEKEDLDLKNHLSG 131
             DGSTFK+  ++ PYF  A K   E +VE +++R   +  +  +  +EKEDL + NHL G
Sbjct: 99   LDGSTFKATIEYEPYFLIAVKRGYESEVEEWVKRVPGDGVVRSMRRVEKEDLSMANHLLG 158

Query: 132  LHKSYLKISFDTVQQLMDVKKDLLHVVERNQAKFDAAEAYESILTG-------------- 177
              ++Y++++F  V  L+  +KD++ +  +N     A +AY  + T               
Sbjct: 159  YRRTYIQLNFANVNDLLAARKDIMPIALKNMKNMSAMDAYAEVATTNGNGNFDLFDNVQE 218

Query: 178  -KREQRPQ--DFLDCIVDLREYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLLEKRVDLL 234
             KR       D  D IVDLREYDVPYH+R  I+ D+R G+WY V +      +    +  
Sbjct: 219  DKRHTNISHADASDYIVDLREYDVPYHVRVMINLDIRVGKWYFVDVKHGVTKIIPNEERS 278

Query: 235  QRAEVHVCAFDIETTKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTP 294
              A+  V AFDIETTKLPLKFPDA  D +MMISY++DGQG+LI NRE + EDI D +YTP
Sbjct: 279  LPADPVVLAFDIETTKLPLKFPDATIDQVMMISYIVDGQGFLITNREIISEDIGDFDYTP 338

Query: 295  KPEFEGYFKVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMS 354
            KPE+ G F + N  +E   L  +F H++E +P +  TYNGD+FDWPF+E RA+ +G  M 
Sbjct: 339  KPEYPGPFMIFNEPDEKATLERFFLHIKEARPTVIATYNGDFFDWPFVEARASVNGIDMY 398

Query: 355  EELGFQCDKNQGECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPED 414
             E+G++   +  + +  +  H+DCF WV RDSYLPQGS+GLKAVT AKLGYDP E++PE 
Sbjct: 399  HEIGWKKGTDD-QYKCSYGVHMDCFHWVNRDSYLPQGSRGLKAVTVAKLGYDPDELDPEL 457

Query: 415  MVRFAKEKPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEM 474
            M  +A+E+PQ +A YSVSDAVATYYLYM YVHPFIFSL TI+P+  D+ LRKG+GTLCEM
Sbjct: 458  MTPYARERPQTLAEYSVSDAVATYYLYMKYVHPFIFSLCTILPLGGDDTLRKGTGTLCEM 517

Query: 475  LLMVQAYKANVICPNKHQSDPEKFYRNHLLESETYIGGHVECLESGVFRSDLPTSFKLDP 534
            LLMVQAY+  ++ PNKH +  E F+  HLL+SETY+GGHVE +E+GVFR+D+P  F +D 
Sbjct: 518  LLMVQAYQREIVLPNKHIAPREAFWDGHLLDSETYVGGHVESIEAGVFRADIPVDFTVDT 577

Query: 535  SAYEQLLNNLDRDLQYAIKVEGKMDLESVSNYDEVKNAIMEKLLRLQEEPIREECPLIYH 594
             A ++L+ ++D  L++ I VE K  L+ V NYDEVK  I+ KL   +E P R E PLIYH
Sbjct: 578  GAVDELIRDIDAALEFVITVEEKKSLDDVENYDEVKAQILGKLNLFKETPNRHERPLIYH 637

Query: 595  LDVAAMYPNIILTNRLQPPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYY 654
            LDVA+MYPNI+ TNRLQP S+V +  C ACDFNRPGKTC R+L W WRGE    KR +Y 
Sbjct: 638  LDVASMYPNIMTTNRLQPDSMVKESDCAACDFNRPGKTCDRRLPWAWRGEYLPAKRDEYN 697

Query: 655  HLKKQIESEFVDGTNGHLS-KSFLDLPKMEQQSRLKDRLKKYCQKAYKRVLDKPVTELRE 713
             ++  +E+E   G   +   ++FLDL   EQ + ++ RL+ + QK Y ++ D   T +RE
Sbjct: 698  MIRHTLENEKFPGLYPNSPMRTFLDLSADEQANLVRKRLQIFSQKVYHKIHDS-TTTVRE 756

Query: 714  AGICMRENSFYVDTVRSFRDRRYEYKGLNKVWKGKLSEAKASGNSI-KIQEAQDMVVLYD 772
            A +C REN FY++TVR FRDRRY+YKG  KVWKGK    KASG S  +I+ A+ M ++YD
Sbjct: 757  AIVCQRENPFYINTVRDFRDRRYDYKGKAKVWKGKTDTLKASGASASEIEAAKKMTIVYD 816

Query: 773  SLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTD 832
            SLQLAHK ILNSFYGYVMRKG+RWYS+EMAGV   TGA IIQ AR L+E++G+PLELDTD
Sbjct: 817  SLQLAHKVILNSFYGYVMRKGSRWYSLEMAGVTCLTGATIIQLARKLVERLGRPLELDTD 876

Query: 833  GIWCVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYET 892
            GIWC+LP +FPENF FK K+  KKL ISYPCVMLN  V    TN QYQTL D  +  Y+T
Sbjct: 877  GIWCMLPATFPENFAFKLKN-GKKLNISYPCVMLNHLVHDKFTNHQYQTLTDEKTFKYKT 935

Query: 893  HSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIK 952
            HS+ SI FEVDGPY+AM+LP SKEE   +KKRYAVFNDDG+LAELKGFE+KRRGELKLIK
Sbjct: 936  HSDNSIFFEVDGPYRAMVLPTSKEEDKNLKKRYAVFNDDGSLAELKGFEVKRRGELKLIK 995

Query: 953  VFQAELFDKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSL 1012
            +FQ ++F  FL G  + +CY+AVA VANRWLD+L ++G  +AD EL++ ISE+  MSK+L
Sbjct: 996  IFQQQIFKFFLEGEDLTQCYTAVAKVANRWLDVLHSKGSTLADEELMELISENRNMSKTL 1055

Query: 1013 ADYGEQKSCAVTTARRLSDFLGDTMVKDKGLRCQYIVACEPQGTPVSERAVPVAIFETDA 1072
             +YG QKS ++TTA+RL+DFLG  MVKD+GL C++I+   P+  PV+ERA+PVAIF  + 
Sbjct: 1056 EEYGSQKSTSITTAKRLADFLGPQMVKDRGLNCKFIICSRPRNAPVTERAIPVAIFSAEE 1115

Query: 1073 EIMKFYLRKWCKTS-SDVGIRSIVDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHP 1131
             + + YL+KW K   +D   R+++DW YY +RL S IQK+ITIPAA+Q++ NPVPRV HP
Sbjct: 1116 SVKRTYLKKWLKEEPADTDPRALLDWDYYLERLGSVIQKLITIPAALQEIRNPVPRVAHP 1175

Query: 1132 DWLYKKVREKEDKFRQRKLVDIFSSLKKDDFLNKTCNAETNLMDENVEDLEDFPKKRRNS 1191
            DWL +++  K DK +QRKL+D+       D         TNL    ++D+ED+       
Sbjct: 1176 DWLQRRINVKNDKLKQRKLMDLVHKEPVGDI--------TNLNGSRMDDMEDYGA----V 1223

Query: 1192 VNGPRPIVRCFEVNNEQKTVKTTDQVDSLRQQLEPSEVSDQQPSSQNAIDTENIDRIVDY 1251
            +  P P+      +    T +        R+ LEP E +D   +    +   +     DY
Sbjct: 1224 LLKPEPVNAAIAASQPAPTSQK-------RKSLEPVESTDPMAALPKTMPGPS----EDY 1272

Query: 1252 KGWLELKKRKWKDNLDRRKKQKLGSLRASHQANGVSESLGDMINHKEAQRRTGVGSYFRR 1311
             G+L+ +K+KWK                                    +RR   GS    
Sbjct: 1273 IGFLDYQKKKWK----------------------FQRQARVRRRQLFGERRGNAGSNL-- 1308

Query: 1312 QETAMTRCH------WQIIQLVPSSQSGVFLAWVVVEGIMVRIPITVPRLFYLN--SKDP 1363
            Q+T M + H      WQ++QL  +   G+  A+V+++  +  + + VPR  +L+  SKD 
Sbjct: 1309 QQTFMKQAHMTFMNTWQLLQLRATDIPGIVTAFVLIDAKIHTLKVRVPRQVFLSLRSKDL 1368

Query: 1364 IVEKFPG---RRVNKTLPHGRRSFNLIEVMIDEDQFRKESKKLAALLADPEVE 1413
               +  G   ++ N TLP+G  S +L+++ + ED +  E+ K + L   P V+
Sbjct: 1369 PDLEIDGCEVQKCNHTLPNGHPSTHLLKLTVLEDIYYNEAAKFSLLFNHPSVD 1421



 Score =  261 bits (666), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 170/613 (27%), Positives = 289/613 (47%), Gaps = 63/613 (10%)

Query: 1409 DPEVEVLGWQQNAAK--IGMQRCAASSQWFNERISLARYAHI------------------ 1448
            D  +  LGWQ   A+  +G   C  S  W     +LARY  +                  
Sbjct: 1619 DSSLPPLGWQAVVARRLVGHYLCLGS--WILHFTALARYGDVPLCNLERDDPRYLIDIAY 1676

Query: 1449 ----------LWISDDGVPDLGGTSEEDECFADEV-HQPVLTYPGAYRKVSVELKIHHLS 1497
                      LW S    PD  G   +D     EV   P +  PG Y  V ++L + +L+
Sbjct: 1677 ARRLQANKIVLWWSPGPRPDHAGLENDDLTGPLEVVKTPNVNNPGTYSSVCIDLDVRNLT 1736

Query: 1498 VNALLKSNQVNEMEGGGLFGFDQDMNSGPYNNELCGFDETTSSAPAFRVVKQLIQRCLTD 1557
            +N +L S+ VN++EG     F    N     ++    D   S+A    V++++++   T+
Sbjct: 1737 INTILTSSLVNDLEGTDSVSF----NPSAGGSDSFASDNAFSNAGVL-VLREMVKAWWTE 1791

Query: 1558 AVTSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEFRKLGATIIF 1617
            A   G+  AD ++QHL RW+ +P S ++D  LH  +  + +K F  L+ +FR++G+ ++F
Sbjct: 1792 AC-QGSAMADILVQHLVRWVENPDSFMYDRALHYYVQMMSKKAFQQLMEDFRRVGSQVVF 1850

Query: 1618 ANFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLFMDQYNYGGI 1677
            A+ +++I+ T + ++  A AY   ++K+++++ LF +I+LE   +W  L++ D++N+GG 
Sbjct: 1851 ASANRLILQTTRAEVGNAFAYSQYIIKSIKSKPLFHFIDLEIKEYWDYLVWYDEFNFGG- 1909

Query: 1678 PARADESLDDDSQ-VDIVSSWNIAEYLPKEIQDHFVLVVSEFMYIPWKHAQKLAASRASL 1736
                 E ++ D Q +  +  W +A +LPK ++  F   V EF+       Q +   +  +
Sbjct: 1910 -KACQEVVEADEQPLQTIMHWQMAAFLPKRLEPSFQQWVVEFI-------QLMHGLKRQV 1961

Query: 1737 QEGSSCTPSITVAAAENFESHIVQYVKGE-----ISSYFTGKLLSIVRDAIHHMKKMNND 1791
                  TP +T     N E    Q + G+     +    +G +    R+ +H     +  
Sbjct: 1962 TNDPDSTPRLTQLPYRNIEKEEGQIILGKSFERPLKKAISGLIAQQKRELLHPELAGDFS 2021

Query: 1792 QHNSPGVMQTAANIHKVDAPLEFIKHVCAAFALDQNVQHDVLVMRKNLLKYVRVREFAPE 1851
              + PG      ++H  +A LE +K +    +LD+N+  +  ++RK LL +  VREF+ E
Sbjct: 2022 FPDLPGT-----HLHPRNAILELVKCLMQILSLDKNITLEARLLRKELLAFFDVREFSKE 2076

Query: 1852 AEFRDPCPSFILPNVICSYCNDCRDLDLCRDMALLA--QDWHCAMPQCGQPYDREVMENA 1909
              F +P  S  LP + C  C   RDLD CRD  LL+    WHC  P CG  YDR  +E  
Sbjct: 2077 GTFTNPSESLKLPQLSCDSCTMARDLDFCRDEELLSAGAGWHC--PFCGAEYDRVAIEER 2134

Query: 1910 LLQIVRQRERLYHLQDLVCIRCNQVKAAHLAEQCACAGSFRCKEDASDFRSKMQIFLNIA 1969
            LL +V      + LQDL C RC  ++     E C C+G +R      +   K+ +   +A
Sbjct: 2135 LLAMVESWTVEWTLQDLKCARCGALRMNEYMEHCTCSGKWRETVSREEIGRKLDVMRRVA 2194

Query: 1970 NRQGFQLLQECTS 1982
               G ++L +   
Sbjct: 2195 RFYGLRMLSDVAG 2207


>gi|294657947|ref|XP_002770523.1| DEHA2E22000p [Debaryomyces hansenii CBS767]
 gi|218512015|sp|Q6BNG2.2|DPOE_DEBHA RecName: Full=DNA polymerase epsilon catalytic subunit A; AltName:
            Full=DNA polymerase II subunit A
 gi|199433072|emb|CAR65865.1| DEHA2E22000p [Debaryomyces hansenii CBS767]
          Length = 2226

 Score = 1300 bits (3364), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 674/1424 (47%), Positives = 924/1424 (64%), Gaps = 87/1424 (6%)

Query: 25   EELEAKLGYDLFSEGD-----KRLGWLLTFASSSLEDEDTRKVYSCIDLYFVSQDGSTFK 79
            ++L++ +G+D    G+      R GWL+   ++++  ++    YS +D YF+ ++G +FK
Sbjct: 59   DQLDSIMGFDRIEHGEMDGAKPRRGWLVNMHATTIPTDEYLAGYSGVDYYFLDEEGGSFK 118

Query: 80   SKYKFRPYFYAATKEKMEMDVEAYLRRRYES-QIADIEILEKEDLDLKNHLSGLHKSYLK 138
            +  ++ PYFY       E +VE  LR+  E   +  +  + KEDL L NHL GL K+ +K
Sbjct: 119  ATIRYDPYFYLVVIPGHESEVEEMLRKVLEPCSLKGLLRVAKEDLSLPNHLVGLKKTLVK 178

Query: 139  ISFDTVQQLMDVKKDLLHVVERNQAKFDAAEAYESI----------------LTGKREQR 182
            +SF  V  L+  ++ L  +++ N+ K D  + Y+ +                   K  ++
Sbjct: 179  LSFHNVVDLLSARRLLNPIIKDNKMKRDTRDIYQVMNFNNVNNANGTEIQTNFNDKSTEQ 238

Query: 183  PQDFLDCIVDLREYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLLEKRVDLLQRAEVHVC 242
              D    I D+REYDVPYH+R +ID  +R G+WY+V +  +   LE+  + +  A+  + 
Sbjct: 239  IADPATLIDDIREYDVPYHVRVSIDEKIRVGKWYNVFVKHSEVRLEEDKEKIAFADPVIL 298

Query: 243  AFDIETTKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYF 302
            AFDIETTK PLKFPDA  D IMMISYM+DG+G+LI NRE + EDIED EYTPKPE+ G F
Sbjct: 299  AFDIETTKAPLKFPDAKTDQIMMISYMIDGEGFLITNREIISEDIEDFEYTPKPEYPGLF 358

Query: 303  KVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCD 362
             + N  +E  +L  +F H+++ +P +  T+NGD+FDWPF+E R   H   M EE+GF  D
Sbjct: 359  TIFNEPDEKMVLVRFFEHIRDSRPTVIATFNGDFFDWPFVEKRTTFHDMDMFEEIGFAKD 418

Query: 363  KNQGECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEK 422
             N+GE ++K+  H+DC+ WVKRDSYLPQGSQGLKAVT AKLGY+P E++PE M  +A EK
Sbjct: 419  -NEGEYKSKYCVHMDCYRWVKRDSYLPQGSQGLKAVTTAKLGYNPTELDPELMTPYAYEK 477

Query: 423  PQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYK 482
            PQ+++ YSVSDAVATYYLY  YVHPFIFSL TIIP++PDEVLRKG+GTLCEMLLMVQAY+
Sbjct: 478  PQLLSEYSVSDAVATYYLYYKYVHPFIFSLCTIIPLNPDEVLRKGTGTLCEMLLMVQAYE 537

Query: 483  ANVICPNKHQSDPEKFYRNHLLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQLLN 542
              ++ PNKH    E+FY  HLLESETY+GGHVE LE+GVFRSDLP  FK+DP+A +++L 
Sbjct: 538  NGIVLPNKHTEPIERFYDGHLLESETYVGGHVESLEAGVFRSDLPNDFKVDPTAVDEILG 597

Query: 543  NLDRDLQYAIKVEGKMDLESVSNYDEVKNAIMEKLLRLQEEPIREECPLIYHLDVAAMYP 602
            +L   L++ I+VE    +E V NYDEV N I + L+ L+E PIR E PLI+H+DVA+MYP
Sbjct: 598  DLHNALKFCIEVENNKKVEDVENYDEVYNQIKDSLVNLRETPIRHENPLIFHVDVASMYP 657

Query: 603  NIILTNRLQPPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYYHLKKQIES 662
            NI+ +NRLQP S+ ++E C ACDFNRPGK C R+L W WRGE +  + ++Y  +K+ +++
Sbjct: 658  NIMTSNRLQPDSMKSEEDCAACDFNRPGKNCDRRLPWSWRGEYYPAEMNEYGMIKRTLQN 717

Query: 663  EFVDGTNGHL-SKSFLDLPKMEQQSRLKDRLKKYCQKAYKRVLDKPVTELREAGICMREN 721
            E        L +K+F +L   EQ S +K RL  Y +K Y R+  +  T  REA +C REN
Sbjct: 718  ETFPPAKPWLPAKTFDELSYSEQASLIKKRLSDYSRKVYHRI-KQSKTVSREAIVCQREN 776

Query: 722  SFYVDTVRSFRDRRYEYKGLNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHKCI 781
             FYVDTVRSFRDRRYE+K L KVWKGK ++     ++I   EA+ MVVLYDSLQLAHK I
Sbjct: 777  PFYVDTVRSFRDRRYEFKTLVKVWKGKTAKIDKH-DTIAKDEAKKMVVLYDSLQLAHKVI 835

Query: 782  LNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLPGS 841
            LNSFYGYVMRKG+RWYSMEMAG+   TGA IIQ AR L+E++G+PLELDTDGIWC+LP S
Sbjct: 836  LNSFYGYVMRKGSRWYSMEMAGITCLTGATIIQMARSLVERLGRPLELDTDGIWCILPKS 895

Query: 842  FPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEFE 901
            FPEN+ FK KD  K + + YPC MLN  V    TN QYQ LVDP +  Y+T SE SI FE
Sbjct: 896  FPENYYFKCKD-GKNIFLEYPCSMLNYLVHDKFTNHQYQDLVDPNTFKYKTRSENSIFFE 954

Query: 902  VDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDK 961
            VDGPYKAM+LP SKEEG  +KKRYAVFNDDG+LAELKGFE+KRRGEL+LIK FQ+++F  
Sbjct: 955  VDGPYKAMVLPTSKEEGKGLKKRYAVFNDDGSLAELKGFELKRRGELQLIKNFQSDIFKL 1014

Query: 962  FLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLADYGEQKSC 1021
            FL G ++E CY +VA VAN WLD+LD +G  + D +LI+ I E+ +MSKSLA+YG QKS 
Sbjct: 1015 FLDGDSLENCYKSVATVANNWLDVLDTKGGMLEDEDLIELICENRSMSKSLAEYGNQKST 1074

Query: 1022 AVTTARRLSDFLGDTMVKDKGLRCQYIVACEPQGTPVSERAVPVAIFETDAEIMKFYLRK 1081
            ++TTA+RL +FLG+ M+KD GL C+YI++ +P G+PV+ERAVPV+IF ++ +  +F+L+K
Sbjct: 1075 SITTAKRLGEFLGEEMIKDAGLACKYIISSKPIGSPVTERAVPVSIFSSEKK--EFFLKK 1132

Query: 1082 WCKTSS--DVGIRSIVDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLYKKVR 1139
            W K  S  +   RS++DW+YY +RL+S +QKII+IPAA+Q + NPVPRV HP+WL KK+ 
Sbjct: 1133 WLKDPSLENFDPRSVIDWNYYYERLASVVQKIISIPAALQDIKNPVPRVPHPEWLQKKIN 1192

Query: 1140 EKEDKFRQRKLVDIFSSLKKDDFLNKTCNAETNLMDENVEDLEDFPKKRRNSVNGPRPIV 1199
             KED  +Q  +   F    K + L K+  +        ++D+EDF       ++   P  
Sbjct: 1193 SKEDSKQQSSISSFFGQATKKEVLQKSIKS--------IQDIEDF-----GELDASIPKG 1239

Query: 1200 RCFEVNNEQKTVKTTDQVDSLRQQLEPSEVSDQQPSSQN--AIDTENIDRIVDYKGWLEL 1257
            R  +V + +            R+  + + VSD +   +N   ++ E      DY G+L+ 
Sbjct: 1240 RVSKVTSRK------------RRNGKANNVSDSEEEERNNAILNGECPSMTEDYAGFLQY 1287

Query: 1258 KKRKWK---DNLDRRKKQKLGSLRASHQANGVSESLGDMINHKEAQRRTGVGSYFRRQET 1314
            +K KWK    N +RRKK   GS                   + E+  R+ VG   RRQ  
Sbjct: 1288 QKAKWKVQEKNRERRKKL-FGS-------------------NAESSHRSSVGGIIRRQAE 1327

Query: 1315 AMTRCHWQIIQL-VPSSQSGVFLAWVVVEGIMVRIPITVPRLFYLNSKDPIVEKFPGR-- 1371
             +    W+I++     S+ G    +V     +      VP+  Y + K  +  K   R  
Sbjct: 1328 NIAGSDWEILEYKADPSKPGDIKVYVSASNKVHSFTFHVPKKVYASFKTELSPKKAIRNC 1387

Query: 1372 ---RVNKTLPHGRRSFNLIEVMIDEDQFRKESKKLAALLADPEV 1412
               +    LP+G    NL ++ + E+ + +ES K+ +LL D  +
Sbjct: 1388 EIEKSTAVLPNGHDGSNLYKLTMPEETYLEESTKVESLLQDSNI 1431



 Score =  240 bits (613), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 165/611 (27%), Positives = 289/611 (47%), Gaps = 68/611 (11%)

Query: 1414 VLGWQQNAAKIGMQRCAASSQWFNERISLARYAHI------------------------- 1448
             +GWQ    K  +      + W  + ISLA+Y ++                         
Sbjct: 1630 AVGWQSLIIKRVVNHYFVLASWIKKLISLAKYGNVPLCNLQIENMGYLIDIEYARRLSQS 1689

Query: 1449 ---LWISDDGVPDLGGTSEEDECFADEVHQPVLTYPGAYRKVSVELKIHHLSVNALLKSN 1505
               LW+S   +PD GG   +     + +  P +  P  Y    +E++I  L++N +L S 
Sbjct: 1690 NIVLWLSSRPLPDHGGFEMDKAQDFENLEFPTINNPEIYETACLEVEIGTLTINTILTSA 1749

Query: 1506 QVNEMEGGGLFGFDQDMNSGPYNNELCGFDETTSSAPAFRVVKQLIQRCLTDAVTSGNVF 1565
             +NE EG  L     D      NN      E + S PA  +++ +++    DA+ + N  
Sbjct: 1750 LINEAEGTDL---ADDAVQFDNNNGASTIAEDSFSTPALSILRGMVKDWWDDALKN-NDN 1805

Query: 1566 ADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEFRKLGATIIFANFSKVII 1625
            AD+++ +L  W+    S L+D  LH  +H +  K    L+ EF+++ A +IFAN +K++I
Sbjct: 1806 ADSMMNNLVTWVQRSDSLLYDYSLHYHVHNLTTKALLQLIGEFKRMNAQVIFANRNKMLI 1865

Query: 1626 DTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLFMDQYNYGGIPARADESL 1685
             T K  +  + AY   +LKA +++ LF +++L  V +W  L++MD+YN+GG      E  
Sbjct: 1866 QTTKVSIENSYAYGQYILKAARSKPLFNFLDLRIVKYWDLLVWMDEYNFGG--RCCTEIT 1923

Query: 1686 DDDSQVDI-VSSWNIAEYLPKEIQDHFVLVVSEFMYIPWKHAQKLAASRASLQEGS-SCT 1743
            +D+ Q  I V+ W I ++LP   Q+ F     +++ I      K      +L  G+ + T
Sbjct: 1924 NDEVQNLIPVNKWQITKFLPVIFQNEF----EDWLIIFLDSLTKFKND--TLIPGTQTGT 1977

Query: 1744 PSITVAAAENFESHIVQYVKG---------EISSYFTGKLLSIVRDAIHHMKKMNNDQHN 1794
            P +T  A      HI++  K           IS+         ++  I  + +  N+   
Sbjct: 1978 PRVTQIA------HILKGQKKLDSNETEEESISNGVMELFRKPLQKRIEKLARRQNESIL 2031

Query: 1795 SPGVMQ-------TAANIHKVDAPLEFIKHVCAAFALDQNVQHDVLVMRKNLLKYVRVRE 1847
            +P + Q         +     +  LE +K +CA F L +    +V ++R+ LL    ++E
Sbjct: 2032 NPELRQEYEFPKLPGSYTSMKNPSLELVKFLCAVFGLSRKRNIEVRLLRRELLSIFDIKE 2091

Query: 1848 FAPEAEFRDPCPSFILPNVICSYCNDCRDLDLCRDMALLAQDWHCAMPQCGQPYDREVME 1907
            F+ EA F++P  S  +P+VIC YCN  RD+D CRD       W+C+   C + Y+R  +E
Sbjct: 2092 FSDEAAFKNPSSSLKIPHVICDYCNYIRDIDFCRDEQ--KNIWNCS--NCNKTYNRVAIE 2147

Query: 1908 NALLQIVRQRERLYHLQDLVCIRCNQVKAAHLAEQCACAGSFRCKEDASDFRSKMQIFLN 1967
              L+    +    +++QDL C +C+Q+K+ +++E C C+G +      ++   ++QIF N
Sbjct: 2148 EELVAQYNKLLTKFYIQDLKCSKCHQIKSDNMSEYCKCSGKWTETLKYTEVDKRLQIFSN 2207

Query: 1968 IANRQGFQLLQ 1978
            +      QLL+
Sbjct: 2208 VGGFFNLQLLK 2218


>gi|388851568|emb|CCF54758.1| probable POL2-DNA polymerase epsilon, calytic subunit A [Ustilago
            hordei]
          Length = 2297

 Score = 1299 bits (3362), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 635/1173 (54%), Positives = 826/1173 (70%), Gaps = 44/1173 (3%)

Query: 25   EELEAKLGYDLFSEGDKRLGWLLTFASSSLEDEDTRKVYSCIDLYFVSQDGSTFKSKYKF 84
            +E++ KLG+    +G  R  WL+    + L D D     S +D YF+  D S FK+   +
Sbjct: 69   DEIDEKLGFHRLEQGQTRQAWLVNMHPTLLRDPDHPTGKSGVDFYFIEDDASMFKATVLY 128

Query: 85   RPYFYAATKEKMEMDVEAYLRRRYESQIADIEILEKEDLDLKNHLSGLHKSYLKISFDTV 144
            +PYF    +   E  VE +LRRR++  I  I+   KEDL L NHL G  + YL+++F  V
Sbjct: 129  QPYFLVGCRPASESSVEEWLRRRFQGLIQSIQRDRKEDLKLPNHLLGHQRLYLRLTFLNV 188

Query: 145  QQLMDVKKDLLHVVERNQAKFDAAEAYESIL----------------------------- 175
            Q L+ V+K+LL + +  Q K  A + Y  +L                             
Sbjct: 189  QDLLSVRKELLPIAKAAQKKLSAVDTYADVLSAASAATASASIEIEMDAAHGESAGLVGE 248

Query: 176  ---TGKREQRPQDFLD---CIVDLREYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLLEK 229
               TG+R++     LD   C+VD+REYD+PY++R AID D+R G WYDVS       L+ 
Sbjct: 249  DGWTGERKRAAASALDPAECLVDIREYDIPYYLRVAIDQDIRVGLWYDVSFEDGIVSLKM 308

Query: 230  RVDLLQRAEVHVCAFDIETTKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIED 289
              D ++RA+  V AFDIE TK PLKFPDA+ D +MMISYM+DGQGYLI NRE V EDIED
Sbjct: 309  VTDRVKRADPVVMAFDIEVTKQPLKFPDAETDAVMMISYMIDGQGYLITNREIVSEDIED 368

Query: 290  LEYTPKPEFEGYFKVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHH 349
             EYTPK E+EG F + N  NE+ +L+ +F H ++ +P +  TYNGD FD+PF++ RA  H
Sbjct: 369  FEYTPKDEYEGPFIIFNEPNELRVLQRFFEHFRDARPTVVATYNGDSFDFPFIDARARAH 428

Query: 350  GFKMSEELGFQCDKNQGECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLE 409
            G  M  E+GF  D +  E +++   HLDCF WV+RDSYLPQGSQGLKAVT AKLGYDP+E
Sbjct: 429  GLNMMNEIGFSKDSDN-EYKSRATAHLDCFRWVQRDSYLPQGSQGLKAVTVAKLGYDPME 487

Query: 410  VNPEDMVRFAKEKPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSG 469
            ++PE M  +A E+PQ +A YSVSDAVATYYLYM YVHPFIFSL  IIP++PDEVLRKGSG
Sbjct: 488  LDPELMTPYAIEQPQTLAQYSVSDAVATYYLYMKYVHPFIFSLCNIIPLNPDEVLRKGSG 547

Query: 470  TLCEMLLMVQAYKANVICPNKHQSDPEKFYRNHLLESETYIGGHVECLESGVFRSDLPTS 529
            TLCE LLMVQA+K N+I PN+H+      Y+ HLLESETY+GGHVE LE+GVFRSD+ T 
Sbjct: 548  TLCETLLMVQAFKGNIIMPNRHEDPVGNTYKGHLLESETYVGGHVEALEAGVFRSDIKTD 607

Query: 530  FKLDPSAYEQLLNNLDRDLQYAIKVEGKMDLESVSNYDEVKNAIMEKLLRLQEEPIREEC 589
            F++DP+A +QL+++LD  LQ++I+ EGK+ LE + NYDEVK  +   L  +++ PIR++ 
Sbjct: 608  FRVDPAAIQQLIDDLDAALQFSIREEGKLALEDIENYDEVKAEVRTMLEVMRDNPIRKDP 667

Query: 590  PLIYHLDVAAMYPNIILTNRLQPPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEIFMGK 649
            PLIYHLDVAAMYPNI+L+ RLQP S+V++ +C  CD+NRPG  C ++++W WRGE F  K
Sbjct: 668  PLIYHLDVAAMYPNIMLSYRLQPDSMVSEAMCATCDYNRPGMKCDKRMDWAWRGEYFPAK 727

Query: 650  RSDYYHLKKQIESEFVDGTNGHLS-KSFLDLPKMEQQSRLKDRLKKYCQKAYKRVLDKPV 708
            R +   ++  + +E       HL+ ++F DL + E+ + L  RL  Y +K Y++  +   
Sbjct: 728  RDEVNMIRNALANETFPPKAAHLARRTFDDLEQNERTALLHKRLGDYSRKVYRKTHESK- 786

Query: 709  TELREAGICMRENSFYVDTVRSFRDRRYEYKGLNKVWKGKLSEAKASGNSIKIQEAQDMV 768
            T +REA IC REN FY++TVR FRDRRYEYKGL+K WK  L  A++  ++I   EA+ M+
Sbjct: 787  TVIREAVICQRENPFYINTVRDFRDRRYEYKGLHKTWKKNLDSAESLNDTI---EAKKMI 843

Query: 769  VLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLE 828
            VLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAG+   TGA IIQ A+ L+E+IG+PLE
Sbjct: 844  VLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGITCLTGASIIQMAKELVERIGRPLE 903

Query: 829  LDTDGIWCVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSK 888
            LDTDGIWC+LPG FPE+         KK  ISYPC MLN  V    TN QY  LVD  + 
Sbjct: 904  LDTDGIWCMLPGVFPED-FKFKVKGGKKFGISYPCTMLNHLVHEKFTNHQYHELVDKSTG 962

Query: 889  TYETHSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGEL 948
             YE  SE SI FE+DGPYKAMILP+SKEE  L+KKRYAVFN DG+LAELKGFE+KRRGEL
Sbjct: 963  RYEIRSENSIFFELDGPYKAMILPSSKEEDKLLKKRYAVFNPDGSLAELKGFEVKRRGEL 1022

Query: 949  KLIKVFQAELFDKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTM 1008
            +LIK FQ ++F+KFL G+T+EECY+AVA VAN+WLD+L ++G  + D ELID I+E+ +M
Sbjct: 1023 QLIKDFQKQIFEKFLLGTTLEECYAAVAKVANQWLDVLFSKGATLHDEELIDLIAENKSM 1082

Query: 1009 SKSLADYGEQKSCAVTTARRLSDFLGDTMVKDKGLRCQYIVACEPQGTPVSERAVPVAIF 1068
            SK+L +YG QKS A+TTA+RL++FLG  MVKDKGL C++I++ +P G PV+ERAVPVA+F
Sbjct: 1083 SKTLQEYGSQKSTAITTAKRLAEFLGAQMVKDKGLACKFIISAKPFGAPVTERAVPVALF 1142

Query: 1069 ETDAEIMKFYLRKWCKTSS--DVGIRSIVDWSYYKQRLSSAIQKIITIPAAMQKVSNPVP 1126
              +  + + YL+K+ + +S  D  IR+I+DW+YY +R    IQK+ITIPAAMQKVSNPVP
Sbjct: 1143 NAEPSVKQHYLKKFLRDNSIMDFDIRNILDWNYYIERFGGVIQKLITIPAAMQKVSNPVP 1202

Query: 1127 RVVHPDWLYKKVREKEDKFRQRKLVDIFSSLKK 1159
            RV HPDWL+K+V  +EDKF+QRKL D+F S  K
Sbjct: 1203 RVRHPDWLHKRVAAREDKFKQRKLTDVFRSAAK 1235



 Score =  268 bits (685), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 193/686 (28%), Positives = 316/686 (46%), Gaps = 109/686 (15%)

Query: 1402 KLAALLADPEVEVLGWQQNAAKIGMQRCAASSQWFNERISLARYAH-------------- 1447
            K+AA   + E+  LGWQ  +A+   Q    +S W    I LA +                
Sbjct: 1620 KIAAAALEDELPALGWQLYSARRMFQCYLRASSWIKGWIDLASHFDLPLCNMEKDFTIFG 1679

Query: 1448 --------------ILWISDDGVPDLGGTSEEDECFA--DEVHQPVLTYPGAYRKVSVEL 1491
                          +LW S    PDLGG  E+    +  DE     +++ GAY  V +E+
Sbjct: 1680 ADIDFARRLVKQDMVLWWSPHPQPDLGGREEDIHAQSRWDEQESLEISHAGAYSTVCLEV 1739

Query: 1492 KIHHLSVNALLKSNQVNEMEG--------GGLFGFDQDMNSGPYNNELCGFDETTSSAPA 1543
             +  L+V+++L+S+ VNEMEG        G     D+       ++ + G    TS+  A
Sbjct: 1740 GLVDLAVDSVLQSSTVNEMEGSTSSLAFEGTSHSLDEYSRGTVESSTILGDSVLTSAVLA 1799

Query: 1544 FRVVKQLIQRCLTDAVTSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAM 1603
               VK +++   T    S + ++  +  + +RW  S  S L +P L R L  +M+K    
Sbjct: 1800 --AVKSMVRTWYTTKRRSRSPYSSLLSDNFWRWASSDSSALFEPALQRFLFGLMKKTLLQ 1857

Query: 1604 LLAEFRKLGATIIFANFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFW 1663
            LLAEF++LGA+I++A+FS++ + T K   + A AY   L+ A+ +RELF+ ++LE +H+W
Sbjct: 1858 LLAEFKRLGASIVYASFSRLFLLTSKPGAANAMAYSRYLMTAVTSRELFKHVQLEIIHYW 1917

Query: 1664 HSLLFMDQYNYGGI---------PARADESLDDDS-------QVDIVSSWNIAEYLPKEI 1707
              LL+MD  N+GG+         PA  +E+ ++           ++  +WNI  +LP  +
Sbjct: 1918 EYLLWMDSANFGGVIADTTDLATPANLEEAGEEAGGRGKEGVAFNVEMNWNIQTFLPLAV 1977

Query: 1708 QDHFVLVVSEFMYIPWKHAQKLAAS----RASLQEGSSCTPS--------------ITVA 1749
            Q+ F + V  F+Y  ++  ++ A +    R  ++     TP+                +A
Sbjct: 1978 QEKFSVAVGSFIYSLYEFKRRAALAGDLERTPVRAVEPNTPAQSTPSHGDKDEGCLTGIA 2037

Query: 1750 AAENFESHIVQYVK--------GEISSYFTGKL----LSIVRDAIHHMKKMNNDQHNS-- 1795
            A+  F + ++ +           E+ S           +IVRD       M   +H    
Sbjct: 2038 ASTKFSADLINHTMTRKLLKQLSELKSAMQASSDEINAAIVRDEDEEYIDMLTTEHKRIW 2097

Query: 1796 -----PGVMQTAANIHKVDAPLEFIKHVCAAFALDQNVQHDVLVMRKNLLKYVRVREFAP 1850
                 PG   T +N       LEFIK   A   L +    +V ++++NLL  + VREF+ 
Sbjct: 2098 SFPVLPGSYLTLSN-----PLLEFIKTTTAVLGLAKENSIEVQILKRNLLDMINVREFSA 2152

Query: 1851 EAEFRDPCPSFILPNVICSYCNDCRDLDLCRDMALL---------AQDWHCAMPQCGQPY 1901
            EAEFR+PC SF L  VIC++CND R LDLCRD  L+            W C+  +C  PY
Sbjct: 2153 EAEFRNPCESFKLALVICTFCNDDRTLDLCRDPDLMPAGAEAGGAVAKWKCS--KCAFPY 2210

Query: 1902 DREVMENALLQIVRQRERLYHLQDLVCIRCNQVKAAHLAEQCACAGSFRCKEDASDFRSK 1961
            +   +E+ L+ I       +HLQDL C +C  +K  +L + C C+G++       +   +
Sbjct: 2211 NIAQLESRLVNIALGYLESFHLQDLRCNKCGALKHTNLQQHCDCSGAYGLMVTRKETLRR 2270

Query: 1962 MQIFLNIANRQGFQLLQECTSWILEV 1987
            ++  L IA   G   ++     IL +
Sbjct: 2271 LRSLLTIAQFHGLGSVRVAVEGILAM 2296


>gi|190345598|gb|EDK37515.2| hypothetical protein PGUG_01613 [Meyerozyma guilliermondii ATCC 6260]
          Length = 2208

 Score = 1297 bits (3357), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 680/1423 (47%), Positives = 916/1423 (64%), Gaps = 87/1423 (6%)

Query: 25   EELEAKLGYDLFSEGD-----KRLGWLLTFASSSLEDEDTRKVYSCIDLYFVSQDGSTFK 79
            +++++ +G++    G+      R GWL+   ++++  ED    YS +D YF+ ++G TFK
Sbjct: 45   DKIDSMMGFNRMDHGELDGTKPRKGWLVNMHTTTVPSEDYLAGYSGVDYYFIDEEGGTFK 104

Query: 80   SKYKFRPYFYAATKEKMEMDVEAYLRRRYES-QIADIEILEKEDLDLKNHLSGLHKSYLK 138
            S  +F PYF+ +     E +VE  LR+R ES  I  I  + KEDL L NHL GL K+ LK
Sbjct: 105  STIQFDPYFFLSVVPGRESEVEETLRKRLESCNIKSINRVVKEDLSLPNHLVGLKKTLLK 164

Query: 139  ISFDTVQQLMDVKKDLLHVVERNQAKFDAAEAYESI----LTGKRE--------QRPQDF 186
            + F  +  L+  ++ L  ++  N+ + +  + Y ++    L G  +            D 
Sbjct: 165  LIFHNISDLLAARRILSPIIRDNEMQNETRDVYSALKISGLNGNTKFDISHSSTNEYTDP 224

Query: 187  LDCIVDLREYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLLEKRVDLLQRAEVHVCAFDI 246
               I D+REYDVPYH+R +ID ++R G+WY V    +   L +  + +  A+  V AFDI
Sbjct: 225  TQLISDIREYDVPYHVRVSIDANIRVGKWYYVYAKHSEVTLVEDKETIAFADPVVLAFDI 284

Query: 247  ETTKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTN 306
            ET K PLKFPD+  D IMMISYM+DG GYLI NR  + EDI+D EYTPKPE+ GYF + N
Sbjct: 285  ETCKAPLKFPDSKTDQIMMISYMIDGDGYLITNRNVIAEDIDDFEYTPKPEYPGYFTIFN 344

Query: 307  VNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDKNQG 366
              +E+ +L+ +F H++EV+P +  T+NGD+FDWP++E RA  H   M EE+GF  D N G
Sbjct: 345  EADEVSMLKRFFEHIREVRPTVIATFNGDFFDWPYVEDRARQHQLDMFEEIGFAKD-NDG 403

Query: 367  ECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQMM 426
            E ++K+  H+DCF WVKRDSYLPQGSQGLKAVT AKLGY+P E++PE M  +A E+PQ++
Sbjct: 404  EYKSKYCVHMDCFRWVKRDSYLPQGSQGLKAVTTAKLGYNPTELDPELMTPYASEQPQLL 463

Query: 427  ASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVI 486
            + YSVSDAVATYYLY  YVHPFIFSL TIIP++PDEVLRKG+GTLCEMLLMVQAY+ N++
Sbjct: 464  SEYSVSDAVATYYLYYKYVHPFIFSLCTIIPLNPDEVLRKGTGTLCEMLLMVQAYQKNIL 523

Query: 487  CPNKHQSDPEKFYRNHLLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQLLNNLDR 546
             PNK+    E+F+  HLLESETY+GGHVE LE+GVFRSDLP  F +DPSA +++L+NL  
Sbjct: 524  LPNKYTDPIERFFEGHLLESETYVGGHVESLEAGVFRSDLPCKFNVDPSAVQEILDNLHN 583

Query: 547  DLQYAIKVEGKMDLESVSNYDEVKNAIMEKLLRLQEEPIREECPLIYHLDVAAMYPNIIL 606
             L++ I+VE K  L+ V NYDE+ N I E LL L+  P+REE PLIYH+DVA+MYPNI+ 
Sbjct: 584  SLRFCIEVENKKSLDDVENYDEIYNKIKETLLDLKNNPVREENPLIYHVDVASMYPNIMT 643

Query: 607  TNRLQPPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYYHLKKQI-ESEFV 665
            +NRLQP S+ ++E C ACDFNRPGKTC R+LEW WRGE +     DY ++K+ + E+   
Sbjct: 644  SNRLQPDSMKSEEDCAACDFNRPGKTCDRRLEWSWRGEFYPTNMGDYNNVKRNLQEANER 703

Query: 666  DGTNGHLSKSFLDLPKMEQQSRLKDRLKKYCQKAYKRVLDKPVTELREAGICMRENSFYV 725
              T       F D+P  +Q   +K+RL +  +K Y R L +  T  R+A +C REN FYV
Sbjct: 704  FQTRSGRRIPFNDMPYPDQAQVIKNRLAEVSKKNYHR-LKQSKTVKRDAIVCQRENPFYV 762

Query: 726  DTVRSFRDRRYEYKGLNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHKCILNSF 785
            +TVR FRDRRYE+K L KVWKGK S+   + +SI  +EA+ MVVLYDSLQLAHK ILNSF
Sbjct: 763  NTVRDFRDRRYEFKTLAKVWKGKSSKMDTT-DSIGREEAKKMVVLYDSLQLAHKVILNSF 821

Query: 786  YGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLPGSFPEN 845
            YGYVMRKG+RWYSMEMAG+   TGAKIIQ AR L+E++G+PLELDTDGIWC+LP SFPEN
Sbjct: 822  YGYVMRKGSRWYSMEMAGITCLTGAKIIQMARSLVERLGRPLELDTDGIWCILPTSFPEN 881

Query: 846  FTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEFEVDGP 905
            +  K KD  KK+ + YPC MLN  V +  TN QYQ LVD  +  Y T SE SI FEVDGP
Sbjct: 882  YNLKCKD-GKKILLEYPCSMLNYLVHQQFTNHQYQDLVDENTFKYSTRSENSIFFEVDGP 940

Query: 906  YKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFLHG 965
            YKAMILP SKEEG  +KKRYAVFNDDG+LAELKGFE+KRRGEL+LIK FQ+++F  FL G
Sbjct: 941  YKAMILPTSKEEGKGLKKRYAVFNDDGSLAELKGFELKRRGELQLIKNFQSDIFKLFLEG 1000

Query: 966  STIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLADYGEQKSCAVTT 1025
             T+E CY AVA+VAN WLD+LD +G  + D +LI+ I E+ +MSKSLA+YG QKS ++TT
Sbjct: 1001 DTLEGCYKAVASVANNWLDVLDTKGGMLEDEDLIELICENRSMSKSLAEYGNQKSTSITT 1060

Query: 1026 ARRLSDFLGDTMVKDKGLRCQYIVACEPQGTPVSERAVPVAIFETDAEIMKFYLRKWCKT 1085
            A+RL +FLG+ MVKD GL C+YI++ +P G P++ERAVPV+IF  + +  + YLR W   
Sbjct: 1061 AKRLGEFLGEEMVKDAGLACKYIISAKPVGKPITERAVPVSIFSHEEK--QKYLRNWLGD 1118

Query: 1086 SSDVGI--RSIVDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLYKKVREKED 1143
             S      RS++DW YY +RL+S +QKIITIPAA+Q V NPVPRV HPDWL KKV   ED
Sbjct: 1119 QSLTSFDPRSVIDWDYYYERLASVVQKIITIPAALQGVKNPVPRVDHPDWLRKKVLASED 1178

Query: 1144 KFRQRKLVDIFSSLKKDDFLNKTCNAETNLMDENVEDLEDFPKKRRNSVNGPRPIVRCFE 1203
            K +Q  +   FS   K+D       AE+ +    ++D+EDF     ++  G R + +   
Sbjct: 1179 KKKQSSIGSFFSKASKED-AAAAAAAESRV----IKDIEDFGSVEYST--GTRKVSKVTS 1231

Query: 1204 -----VNNEQKTVKTTDQVDSLRQQLEPSEVSDQQPSSQNAIDTENIDRIVDYKGWLELK 1258
                 +NN        +++ ++ Q+  P                       DY G+L  +
Sbjct: 1232 RKRKGINNANSDPLEEEKIAAILQKPCPKMTE-------------------DYAGFLAYQ 1272

Query: 1259 KRKWKDNLDRRKKQKLGSLRASHQANGVSESLGDMINHKEAQRRTGVGSYFRRQETAMTR 1318
            K KW+  +  R +++  +L                    +   R+ VG+ +RRQ  ++  
Sbjct: 1273 KAKWR--VQARNRERRRTLFGPSA---------------DTSFRSSVGTLYRRQAESVAG 1315

Query: 1319 CHWQIIQLVPS-SQSGVFLAWVVVEGIMVRIPITVPRLFYLNSKDPIVEKFPGRRV---- 1373
             +W+I+Q  P  S+ G     V     +      +P++ Y   K    E  P RR+    
Sbjct: 1316 SNWEILQYKPDPSKPGALKVHVFSNNKVHTFSFQIPKIVYAALKS---ELSPRRRLREAR 1372

Query: 1374 ----NKTLPHGRRSFNLIEVMIDEDQFRKESKKLAALLADPEV 1412
                N  LP+G  + +L ++ + E  F +E   + +LL    V
Sbjct: 1373 IDPSNAILPNGHDASHLYKITMPEAVFEEEMLSVDSLLQGSTV 1415



 Score =  234 bits (597), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 156/618 (25%), Positives = 284/618 (45%), Gaps = 76/618 (12%)

Query: 1411 EVEVLGWQQNAAKIGMQRCAASSQWFNERISLARYAHI---------------------- 1448
            ++  +GWQ   +K  +        W    IS+++Y +I                      
Sbjct: 1611 KLPAIGWQSLISKRIVNHYFVLGAWIKNLISISKYGNIPLCNLEIDNLGYLIDVEYARRL 1670

Query: 1449 ------LWISDDGVPDLGGTSEEDECFADEVHQPVLTYPGAYRKVSVELKIHHLSVNALL 1502
                  LW S   +PD GG   +     +    P    P  Y   S+E+++  L++N +L
Sbjct: 1671 SMNNVVLWWSPKALPDHGGFENDSAQDYENFDFPQFNNPEVYDTTSLEIELGTLTINTIL 1730

Query: 1503 KSNQVNEMEGGGL----FGFDQDMNSGPYNNELCGFDETTSSAPAFRVVKQLIQRCLTDA 1558
             S  +N  EG  L      FD +  +G   ++       + SAPA ++++ +++    DA
Sbjct: 1731 TSALINGAEGTDLADEVVEFDNNNGAGSIASD-------SFSAPAMQILRSMVKNWWDDA 1783

Query: 1559 VTSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEFRKLGATIIFA 1618
            + + +V ADA++ +L  W+    S L+D  LH  +H +  K    LL EF++ G+ +IFA
Sbjct: 1784 L-NNDVNADALMNNLEMWIQRKESHLYDYALHYQVHNLTIKSLLQLLGEFKRSGSNVIFA 1842

Query: 1619 NFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLFMDQYNYGGIP 1678
            N +KVI+ T K  +    A    L+KA + + LF ++++  V +W  L++MD++N+GG  
Sbjct: 1843 NRNKVILSTPKVSVEQTYASTQYLVKATRAKPLFNFLDMRVVKYWDILVWMDRFNFGGRS 1902

Query: 1679 ARADESLDDDSQVDIVSSWNIAEYLPKEIQDHFVLVVSEFMYIPWKHAQKLAASRASLQE 1738
             + + + +++  + I S+W I ++LP   QD F   V  F+    KH  K     + +  
Sbjct: 1903 CK-EITAEENQNLTIESNWLIKKFLPIMFQDEFEDWVLIFIQALAKHKSKTILQSSQMGR 1961

Query: 1739 GSSCTPSITVAAAENFESHIVQYVKGE-------ISSYFTGKLLSIVR----DAIHHMKK 1787
                T              I   +KG+           +   ++ + R      I  + +
Sbjct: 1962 TQRVT-------------QIAHRIKGKKEDGEENEEDEYNYDVVDVFRLPLLKRIEKLYR 2008

Query: 1788 MNNDQHNSPGVMQ-------TAANIHKVDAPLEFIKHVCAAFALDQNVQHDVLVMRKNLL 1840
              N+   +P + Q         ++++  +  LE +K +CA F+L      +V ++RK+LL
Sbjct: 2009 RQNESIINPELEQEYRFPVLPGSHLNMKNPALELVKFLCAVFSLSHRQNIEVRMLRKDLL 2068

Query: 1841 KYVRVREFAPEAEFRDPCPSFILPNVICSYCNDCRDLDLCRDMALLAQDWHCAMPQCGQP 1900
                V+EF+PEA F+DPC S +L    C YCN  R++D CRD  +    W+C    C + 
Sbjct: 2069 SIFDVKEFSPEANFKDPCVSLVLSQFRCDYCNHVREIDFCRDTEVDV--WNCT--NCHKQ 2124

Query: 1901 YDREVMENALLQIVRQRERLYHLQDLVCIRCNQVKAAHLAEQCACAGSFRCKEDASDFRS 1960
            +++  +E  L+    +    +  QDL C +C Q+K+ +++E C C+G +           
Sbjct: 2125 HNKASLEEQLITQYLKTVTKFQCQDLKCSKCGQIKSDNMSEFCRCSGKWVGTIPYEHIAQ 2184

Query: 1961 KMQIFLNIANRQGFQLLQ 1978
            ++QI+  +A     +LL+
Sbjct: 2185 ELQIYAGVAKAYNLELLR 2202


>gi|255721985|ref|XP_002545927.1| DNA polymerase epsilon [Candida tropicalis MYA-3404]
 gi|240136416|gb|EER35969.1| DNA polymerase epsilon [Candida tropicalis MYA-3404]
          Length = 2207

 Score = 1296 bits (3355), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 677/1405 (48%), Positives = 918/1405 (65%), Gaps = 74/1405 (5%)

Query: 25   EELEAKLGYDLFSEGDK-----RLGWLLTFASSSLEDEDTRKVYSCIDLYFVSQDGSTFK 79
            + +++ +G+D F  G+      R GWL+ F ++++  ++    YS +D YF+ ++G +FK
Sbjct: 64   DNIDSLMGFDRFDHGENDGNKPRKGWLINFHATTIPSDEYLTGYSGVDYYFLDEEGGSFK 123

Query: 80   SKYKFRPYFYA-ATKEKMEMDVEAYLRRRYES-QIADIEILEKEDLDLKNHLSGLHKSYL 137
            +  ++ PYF+        E +VE +LR+  ES  +     + K+ L+L NHL GL K+ +
Sbjct: 124  ATLQYDPYFFIDVLPGDHESEVEEWLRKNLESCNVKKFSRVIKDALELPNHLLGLKKNLI 183

Query: 138  KISFDTVQQLMDVKKDLLHVVERNQAKFDAAEAYESILTGKREQRPQDFLDCIVDLREYD 197
            K+SF   Q L+  K+ L  +++ NQ K ++ + Y +         P  ++D   D+REYD
Sbjct: 184  KLSFHNNQDLLAAKRILTPIIKDNQLKRESRDLY-NFKDVDSSSDPSTYID---DIREYD 239

Query: 198  VPYHIRFAIDNDVRCGQWYDVSISSTGPLLEKRVDLLQRAEVHVCAFDIETTKLPLKFPD 257
            VPYH+R +ID  +R G+WYDV    +   + +  + +  A+  V AFDIETTK PLKFPD
Sbjct: 240  VPYHVRVSIDKQLRVGKWYDVYAKHSKIEIVEDKEKIAFADPVVLAFDIETTKAPLKFPD 299

Query: 258  ADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNVNNEIELLRLW 317
            A  D IMMISYM+DG+G+LI NRE + EDIED EYTPKPE+ G F + N  +E  LL  +
Sbjct: 300  AKVDQIMMISYMIDGEGFLITNREIISEDIEDFEYTPKPEYPGLFTIFNEPDEKHLLMRF 359

Query: 318  FAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDKNQGECRAKFACHLD 377
            F H++EVKP +  T+NGD+FDWPF+E RA  H   M +E+GF  D N+ E ++K+  H+D
Sbjct: 360  FEHVREVKPTVIATFNGDFFDWPFVEKRARFHDMDMFDEIGFAKD-NEDEYKSKYCVHMD 418

Query: 378  CFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQMMASYSVSDAVAT 437
            CF WVKRDSYLPQGSQGLKAVT  KLGY+P E++PE M  +A EKPQ+++ YSVSDAVAT
Sbjct: 419  CFRWVKRDSYLPQGSQGLKAVTTVKLGYNPTELDPELMTPYAYEKPQLLSEYSVSDAVAT 478

Query: 438  YYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVICPNKHQSDPEK 497
            YYLY  YVHPFIFSL TIIP++PDEVLRKG+GTLCEMLL VQAY+ N++ PNKH    E+
Sbjct: 479  YYLYYKYVHPFIFSLCTIIPLNPDEVLRKGTGTLCEMLLSVQAYEGNILLPNKHADPIER 538

Query: 498  FYRNHLLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQLLNNLDRDLQYAIKVEGK 557
            FY  HLLESETY+GGHVE LE+GVFRSD+ T FK+DP+A ++LL NL   +Q+ I+VE  
Sbjct: 539  FYDGHLLESETYVGGHVESLEAGVFRSDIDTDFKVDPTAIDELLGNLRNSMQFCIEVENG 598

Query: 558  MDLESVSNYDEVKNAIMEKLLRLQEEPIREECPLIYHLDVAAMYPNIILTNRLQPPSIVT 617
              LE V N++E+ + I   LL L+  PIR E PLIYH+DVA+MYPNI+ TNRLQP S+ T
Sbjct: 599  KKLEDVENFEEIYSKIESSLLNLKNTPIRHEKPLIYHVDVASMYPNIMTTNRLQPDSMKT 658

Query: 618  DEVCTACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYYHLKKQIESEFVDGTNGHL-SKSF 676
            +E C ACDFNRPGK C R+L W WRGE +  + ++Y  +K+ +++E   G    L  ++F
Sbjct: 659  EEDCAACDFNRPGKNCDRRLPWAWRGEYYPAEMNEYNMIKRTLQNETFPGAKPWLPPRTF 718

Query: 677  LDLPKMEQQSRLKDRLKKYCQKAYKRVLDKPVTELREAGICMRENSFYVDTVRSFRDRRY 736
             +LP  EQ S +K R+  Y +K Y RV    V   REA IC REN FYV+TVRSFRDRRY
Sbjct: 719  DELPYAEQASLIKKRISDYSRKVYHRVKASKVV-TREAIICQRENPFYVNTVRSFRDRRY 777

Query: 737  EYKGLNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHKCILNSFYGYVMRKGARW 796
            E+KGL KVWKGK+ +  AS ++I   EA+ MVVLYDSLQLAHK ILNSFYGYVMRKG+RW
Sbjct: 778  EFKGLAKVWKGKVGKIDAS-DTIARDEAKKMVVLYDSLQLAHKVILNSFYGYVMRKGSRW 836

Query: 797  YSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLPGSFPENFTFKTKDLKKK 856
            YSMEMAGV   TGA IIQ AR L+E+IG+PLELDTDGIWC+LP +FP+ ++ K KD  KK
Sbjct: 837  YSMEMAGVTCLTGATIIQMARSLVERIGRPLELDTDGIWCILPSTFPDRYSLKCKD-GKK 895

Query: 857  LTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEFEVDGPYKAMILPASKE 916
            + + YPC MLN  V +  TN QYQ LVDP +  YET S+ SI FE+DGPYKAMILP SKE
Sbjct: 896  IHLEYPCSMLNYLVHQTYTNHQYQDLVDPETFKYETRSDNSIFFELDGPYKAMILPTSKE 955

Query: 917  EGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFLHGSTIEECYSAVA 976
            EG  +KKRYAVFNDDG+LAELKGFE+KRRGEL+LIK FQ+++F  FL G+T+E CY AVA
Sbjct: 956  EGKGLKKRYAVFNDDGSLAELKGFELKRRGELQLIKNFQSDIFKLFLEGNTLETCYQAVA 1015

Query: 977  AVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLADYGEQKSCAVTTARRLSDFLGDT 1036
             VAN WLD+LD +G  + D +LI+ I E+ +MSKSLA+YG QKS ++TTARRL +FLG+ 
Sbjct: 1016 TVANNWLDVLDTKGGMLEDEDLIELICENKSMSKSLAEYGAQKSTSITTARRLGEFLGEE 1075

Query: 1037 MVKDKGLRCQYIVACEPQGTPVSERAVPVAIFETDAEIMKFYLRKWCKTSS--DVGIRSI 1094
            MVKD GL  +YI++ +P G PV+ERAVPV+IF +D +  + +L+KW K  S      R I
Sbjct: 1076 MVKDAGLATKYIISAKPIGAPVTERAVPVSIFSSDKK--ELFLKKWLKDPSLNKFSPRDI 1133

Query: 1095 VDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLYKKVREKEDKFRQRKLVDIF 1154
            +DW YY +RL+S IQKIITIPAA+Q V NPVPRV HP+WL + V+ KED   Q  +   F
Sbjct: 1134 LDWDYYAERLASVIQKIITIPAALQNVKNPVPRVQHPEWLKRIVKNKEDTKHQSSISSFF 1193

Query: 1155 SSLKKDDFLNKTCNAETNLMDENVEDLEDFPKKRRNSVNGPRPIVRCFEVNNEQKTVKTT 1214
            +         KT   E  L     +D+EDF       V       +  +V + ++     
Sbjct: 1194 T---------KTTKQEAKL-----KDIEDF-----GEVAASVEKTKISKVTSRKRKSGRA 1234

Query: 1215 DQVDSLRQQLEPSEVSDQQPSSQNAIDTENIDRIVDYKGWLELKKRKWK-DNLDRRKKQK 1273
            + VD          +++++  +Q  ++      + DY+G+L+ +K KWK     R +++K
Sbjct: 1235 NMVD----------LAEEEERNQAILNGPCPSMLDDYQGFLQYQKAKWKVQATGRERRRK 1284

Query: 1274 LGSLRASHQANGVSESLGDMINHKEAQRRTGVGSYFRRQETAMTRCHWQIIQLVPS-SQS 1332
            L    A                  E+ +R+ VG   R++   +   +W+I++  P  S+ 
Sbjct: 1285 LFGSNA------------------ESSQRSTVGGMIRKRAENIAGSNWEILEYKPDPSKP 1326

Query: 1333 GVFLAWVVVEGIMVRIPITVPRLFYLNSKDPIVEK--FPGRRVNKT---LPHGRRSFNLI 1387
            G    ++     +      VP+  Y   K  +  K   PG  V K+   LP+G  + NL 
Sbjct: 1327 GDLKVYISAGEKVHSFNFHVPKKVYATFKSELSTKKIIPGCEVEKSNAILPNGHDATNLY 1386

Query: 1388 EVMIDEDQFRKESKKLAALLADPEV 1412
            ++ + +  F+ + K +  +L D  +
Sbjct: 1387 KLTMPQSVFQDQLKDVDGILQDSNI 1411



 Score =  250 bits (639), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 171/617 (27%), Positives = 295/617 (47%), Gaps = 78/617 (12%)

Query: 1414 VLGWQQNAAKIGMQRCAASSQWFNERISLARYAHI------------------------- 1448
             +GWQ   +K  +      + W    ++ A+YA +                         
Sbjct: 1610 AVGWQTLISKRVINHFFVLASWIKNLVTFAKYAKVPLCNLQIENLGFLIDIEYARRLSEN 1669

Query: 1449 ---LWISDDGVPDLGGTSEEDECFADEVHQPVLTYPGAYRKVSVELKIHHLSVNALLKSN 1505
               LW S +  PDLGG   +     + +  P +  P  Y    +E++I  L++N +L S+
Sbjct: 1670 NIVLWWSSNPTPDLGGFELDRVHDFENLEFPTINNPEIYETTCLEVEIGTLTINTILTSS 1729

Query: 1506 QVNEMEGGGLF--GFDQDMNSGPYNNELCGFDETTSSAPAFRVVKQLIQRCLTDAVTSGN 1563
             +NE EG  L   G   DMN+G        F E + S+PA  +++ +++    DA+ + N
Sbjct: 1730 LINEAEGTDLAEDGVQFDMNNGA-----STFAEDSFSSPALAILRSMVKDWWDDALRN-N 1783

Query: 1564 VFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEFRKLGATIIFANFSKV 1623
            V AD+I+  L  W+    S L+DP LH  +H +  K    L+ EF+K+GA +IFAN +++
Sbjct: 1784 VNADSIMNALVTWVNKNESLLYDPALHYHVHNLTSKALLQLINEFKKMGAQVIFANRNRM 1843

Query: 1624 IIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLFMDQYNYGGIPARADE 1683
            ++ T K  +  + AY   +LKA +++ LF +++L+ V +W  L++MD++NYGG      E
Sbjct: 1844 LVQTTKVSVENSYAYGQYILKAARSKPLFNFLDLKIVKYWDLLVWMDEFNYGG--RCCTE 1901

Query: 1684 SLDDDSQVDIVSS-WNIAEYLPKEIQDHFVLVVSEFMYIPWKHAQKLAASRASLQEGSSC 1742
             ++++ Q  I  + W++ ++LP   Q+ F   +  F+    K+  +       L  G + 
Sbjct: 1902 IVNEEIQNLIPENHWHLQKFLPILFQNEFEDWIVIFLDALSKYKSE------HLLGGGTQ 1955

Query: 1743 TPSITVAAAENFESHIVQYVKG-------EISSY-FTGKLLSIVRDAI-HHMKKMNNDQ- 1792
             P+   A      + IV  ++G       EI        ++ I R  +   ++K+   Q 
Sbjct: 1956 NPNTPRA------TQIVHILRGQKKLEAKEIDEEDINNGVIEIFRKPLTRRIEKLYRRQL 2009

Query: 1793 -----------HNSPGVMQTAANIHKVDAPLEFIKHVCAAFALDQNVQHDVLVMRKNLLK 1841
                       +  P +  +  N+   +  LE +K +CA FAL Q    +V ++RK LL+
Sbjct: 2010 EAILNPEFKKEYEFPKLAGSHLNLK--NPVLELVKFLCAIFALSQKRTIEVRLLRKELLQ 2067

Query: 1842 YVRVREFAPEAEFRDPCPSFILPNVICSYCNDCRDLDLCRDMALLAQDWHCAMPQCGQPY 1901
               +REF+ EA F +P  S  LP VIC YCN   D+D C         W+C+   C +PY
Sbjct: 2068 IFDIREFSKEAVFNNPSSSLKLPQVICDYCNHITDIDFCCQNE--ESVWNCS--NCHKPY 2123

Query: 1902 DREVMENALLQIVRQRERLYHLQDLVCIRCNQVKAAHLAEQCACAGSFRCKEDASDFRSK 1961
            D+  +E  ++  + +    ++ QDL C +CNQ++  ++   C C+GS+    D+     K
Sbjct: 2124 DKSAIEEGIISQLNKLFVKFYSQDLKCDKCNQIRGNYMDLHCKCSGSWIETMDSRSMEKK 2183

Query: 1962 MQIFLNIANRQGFQLLQ 1978
             QIF N+AN    + L+
Sbjct: 2184 FQIFNNVANFYNLKTLR 2200


>gi|328722326|ref|XP_003247545.1| PREDICTED: DNA polymerase epsilon catalytic subunit A-like isoform 2
            [Acyrthosiphon pisum]
          Length = 2069

 Score = 1295 bits (3352), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 672/1421 (47%), Positives = 926/1421 (65%), Gaps = 71/1421 (4%)

Query: 18   KLIRSAEEEL-EAKLGYDLFSEGDKRLGWLLTFASSSLEDEDTRKVYSCIDLYFVSQDGS 76
            +L +S E +L + K G+    +  +  G+L+   S+ + DED R V + +D YF+  DGS
Sbjct: 29   RLKQSIENDLIDNKYGFFRVKDYQEHTGYLINMHSTEIVDEDKRLV-AAVDYYFIKDDGS 87

Query: 77   TFKSKYKFRPYFYAATKEKMEMDVEAYLRRRYESQIADIEILEKEDLDLKNHLSGLHKSY 136
             F+    F+PYFY   K++   +V AY+ +++      I+ + KEDLDL NHL GL + Y
Sbjct: 88   RFRVTQPFQPYFYLLAKKEYIQEVVAYISKKFAGSFTCIDTVMKEDLDLPNHLIGLKQRY 147

Query: 137  LKISFDTVQQLMDVKKDLLHVVERNQAKFDAAEAYESILTGK--------REQRPQDFLD 188
            +KISF TV ++  +++ ++  V +N+        Y  +LT            ++  D ++
Sbjct: 148  IKISFATVTEMNKMRQAIMPAVRKNRLALKNNSYYTEMLTESLANLSEVVSSKKQVDHME 207

Query: 189  CIVDLREYDVPYHIRFAIDNDVRCGQWYDVSISSTGP----LLEKRVDLLQRAEVHVCAF 244
             I+D+REYDV YHIR + D  +  G WY  ++   GP       +R D++ R ++ V AF
Sbjct: 208  NIIDIREYDVVYHIRVSTDLKIFTGLWY--TVQCRGPYNQATFTQRDDIIDRPDMIVLAF 265

Query: 245  DIETTKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKV 304
            DIETTKLPLKFPDA+ D IMMISYM+DGQGYLI NRE +  D+ D EYTPKPEFEG F +
Sbjct: 266  DIETTKLPLKFPDANTDQIMMISYMIDGQGYLINNREIISADVVDFEYTPKPEFEGLFTI 325

Query: 305  TNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDKN 364
             N  +E  L+  +F H+ E++P I VTYNGD+FDWPF+ETRAA H   MS+E+GF     
Sbjct: 326  FNEPDEAALINRFFEHIMEIRPHIIVTYNGDFFDWPFVETRAAVHDLNMSQEIGFS-KNT 384

Query: 365  QGECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQ 424
             G    + A H+DC  WVKRDSYLP GSQ LKAV KAKL YDP+E++PEDM R A ++PQ
Sbjct: 385  AGVYSCRPAMHMDCLCWVKRDSYLPVGSQNLKAVAKAKLRYDPVELDPEDMCRLATDEPQ 444

Query: 425  MMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKAN 484
            ++++YSVSDAVATYYLYM YVHPFIF+L TIIPM PDEVLRKGSGTLCE LLMV+A+ AN
Sbjct: 445  VLSNYSVSDAVATYYLYMKYVHPFIFALCTIIPMEPDEVLRKGSGTLCESLLMVEAFHAN 504

Query: 485  VICPNKHQSDPEKFYRN-HLLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQLLNN 543
            +I PNK + +  K   + H+L+ ETY+GGHVE LESGVFR+D+P  F+LD SA++ L+  
Sbjct: 505  IIFPNKQEQELNKLSDDGHVLDQETYVGGHVEALESGVFRADIPCRFRLDTSAFDMLIEK 564

Query: 544  LDRDLQYAIKVEGKMDLESVSNYDEVKNAIMEKLLRLQEEPIREECPLIYHLDVAAMYPN 603
                L++AI+ E K+ ++SV+N DE+   ++EKL  L+ +P     PLIYHLDV AMYPN
Sbjct: 565  ASEILKFAIEEEEKVPMDSVTNLDEILKDVVEKLEALKADPYPLLKPLIYHLDVGAMYPN 624

Query: 604  IILTNRLQPPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYYHLKKQIESE 663
            IILTNRLQP ++V +E+C ACDFN PG  C R + W WRGE+    R+++  +++Q+E+E
Sbjct: 625  IILTNRLQPSAMVNEEICAACDFNIPGAKCQRTMTWQWRGELMPASRTEFQRIQQQLETE 684

Query: 664  FVDGT-NGHLSKSFLDLPKMEQQSRLKDRLKKYCQKAYKRVLDKPVTELREAGICMRENS 722
               G       ++F  L + E+ +  K RL +YC+K YK+     + E R   IC +ENS
Sbjct: 685  KFPGQFPNDPPRAFHQLRRDERATWEKKRLTEYCRKVYKKTHITKIEE-RSTTICQKENS 743

Query: 723  FYVDTVRSFRDRRYEYKGLNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHKCIL 782
            FYVDTVR+FRDRRYEYKGL KV K ++SEA   G+ ++I+ A++  +LYDSLQLAHKCIL
Sbjct: 744  FYVDTVRAFRDRRYEYKGLCKVAKKQISEAITIGDPVEIKSAKNREILYDSLQLAHKCIL 803

Query: 783  NSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLPGSF 842
            NSFYGYVMRKGARW+SMEMAG+V  TGA II+ AR +IEKIG+PLELDTDGIWCVLP +F
Sbjct: 804  NSFYGYVMRKGARWHSMEMAGIVCCTGAAIIKKAREIIEKIGRPLELDTDGIWCVLPSTF 863

Query: 843  PENFTFKTKDLKK-KLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEFE 901
            PEN+  K+   KK K T+S+P  +LN  V  + TN  Y  LVD  +  YE  SE SI FE
Sbjct: 864  PENYNVKSTHTKKTKFTVSFPNAVLNSMVKEHFTNHIYHDLVDSKNLIYEQRSENSIFFE 923

Query: 902  VDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDK 961
            VDGPY AM+LPASKEEG  +KKRYAVFN D +LAELKGFE+KRRGEL++IK+FQ+ +F+ 
Sbjct: 924  VDGPYLAMVLPASKEEGKKLKKRYAVFNLDKSLAELKGFEVKRRGELQIIKIFQSSVFEA 983

Query: 962  FLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLADYGEQKSC 1021
            FL G T+E+CY +VA VA+ WLD+L ++GK++ DSEL + ISE+ +MS+ L DYG QKS 
Sbjct: 984  FLKGDTLEKCYESVATVADYWLDVLYSKGKNMPDSELFELISENRSMSRKLEDYGAQKST 1043

Query: 1022 AVTTARRLSDFLGDTMVKDKGLRCQYIVACEPQGTPVSERAVPVAIFETDAEIMKFYLRK 1081
            +++TA+RL++FLGD MVKDKGL C++I++ +P+GTPV++RA+P+AIF+++  + + YLR+
Sbjct: 1044 SISTAKRLAEFLGDQMVKDKGLACRFIISKKPEGTPVTQRAIPLAIFQSELSVKRHYLRR 1103

Query: 1082 WCKTSS--DVGIRSIVDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLYKKVR 1139
            W   +S  D+ IR ++DW YY +RLS  IQKIITIPA +Q ++NPVPRV HPDWL+KK+ 
Sbjct: 1104 WLGDNSIDDIDIRDVLDWDYYIERLSGTIQKIITIPATLQGIANPVPRVKHPDWLHKKML 1163

Query: 1140 EKEDKFRQRKLVDIFSSLKKDDFLNKTCNAETNLMDEN-VEDLEDFPKKRRNSVNG--PR 1196
             K D  +QRK+  +F ++            + NL +++ ++D+EDF +   N+     PR
Sbjct: 1164 MKADPLKQRKITTMFQAM--------PVRVQDNLTEQHALQDIEDFGENEDNNYVEIRPR 1215

Query: 1197 PIVRCFEVNNEQKTVKTTDQVDSLRQQLEPSEVSDQQPSSQNAIDTENIDRIVDYKGWLE 1256
            PI     V  ++K   +     + ++ L P       PS+             D + W+ 
Sbjct: 1216 PI-----VTKKRKRDPSPIDARNWKEALGPP------PSAS------------DIQNWIV 1252

Query: 1257 LKKRKWKDNLDRRKKQKLGSLRASHQANGVSESLGDMINHKEAQRRTGVGSYFRRQETAM 1316
             +K+KW   L+ R K     +   H      + + D   H    R   +G + RR +  +
Sbjct: 1253 YQKKKWNWQLEMRAK-----IVGKH-----GKRMRDDQIHVPKGRAGTLGGFLRRAQQTL 1302

Query: 1317 TRCHWQIIQLVPSSQSGVFLAWVVVEGIMVRIPITVPRLFYLNSKDP---IVEK-FPGRR 1372
                WQIIQ+  S + GV   W ++   +  I + VPR FY+N +     I EK     +
Sbjct: 1303 LSQPWQIIQVCQSGEPGVLKLWAMIGDELHNIRMNVPRFFYVNQRQTEIDISEKHISCTK 1362

Query: 1373 VNKTLPHGRRSFNLIEVMIDEDQFRKESKKLAALLADPEVE 1413
            VN  LP  R   NL +  + E  F +        L+ P VE
Sbjct: 1363 VNMILPRARPILNLYQYTVLEKDFGETKDHFMCNLSKPGVE 1403



 Score =  174 bits (441), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 122/419 (29%), Positives = 200/419 (47%), Gaps = 49/419 (11%)

Query: 1407 LADPE-VEVLGWQQNAAKIGMQRCAASSQWFNERISLARYA----HILWISDDGVPDLGG 1461
            L  PE + ++  Q    +I +    A    F   I  AR+      +LWIS+   PDLGG
Sbjct: 1619 LNSPENINIMLEQCRYLQIPLGNLPADVTLFASDIFFARHLMKHNFVLWISETDKPDLGG 1678

Query: 1462 TSEEDECF---ADEVHQPVLTYPGAYRKVSVELKIHHLSVNALLKSNQVNEMEGGGL-FG 1517
               +D      ++E    ++   G Y    +EL+I  L V  LL+S+ +++ EG      
Sbjct: 1679 RESDDNRMLMDSEESSSMLVNNEGCYTSYCIELEIDALPVTTLLQSHHIHDFEGTSAGVA 1738

Query: 1518 FDQD--------MNSGPYNNELCGFDETTSSAPAFRVVKQLIQRCLTDAVTSGNVFADAI 1569
            FDQ         M+ G +      +DE    + AFRV++ ++     D V   N FAD  
Sbjct: 1739 FDQIPQASLEEIMDGGTFVTP--TYDEIALCSAAFRVLRSMVNVWFRDVVLHKNPFADFQ 1796

Query: 1570 LQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEFRKLGATIIFANFSKVIIDTGK 1629
            + H YRWL SP++ L+DP L + L+ +M+K+F  L+AEF++LG+TIIFANF+K++I T K
Sbjct: 1797 MVHFYRWLRSPNALLYDPALRKTLYSLMRKLFMQLIAEFKRLGSTIIFANFNKIVICTKK 1856

Query: 1630 FDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLFMDQYNYGGIPARADESLD--- 1686
              L  A  Y   +++ +  +ELF  +++     W  L+++D +NY G+ A+  + L    
Sbjct: 1857 KSLEDAIFYVRYVVQNITNKELFHSLQISLGPCWEYLMWLDLWNYSGVKAKFSDKLKEAM 1916

Query: 1687 -----------------------DDSQVDIVSSWNIAEYLPK--EIQDHFVLVVSEFMYI 1721
                                   D  +V I  +WNI+E+LP     + HF   ++ +M  
Sbjct: 1917 GDIIDMSNEDVEHLLKEHKAPGPDIEEVGIEMNWNISEFLPNVCHARKHFEETIAVYMSA 1976

Query: 1722 PWKHAQKL-AASRASLQEGSSCTPSITVAAAENFESHIVQYVKGEISSYFTGKLLSIVR 1779
             +KH + + + +   + E  S      +    + ES   +Y K  IS   T +L SI +
Sbjct: 1977 IYKHMRSIDSVTLNRISESLSQVTQSNMLGVASCES-TAEYAKTVISDELTTRLFSITQ 2034


>gi|156848125|ref|XP_001646945.1| hypothetical protein Kpol_2000p54 [Vanderwaltozyma polyspora DSM
            70294]
 gi|156117627|gb|EDO19087.1| hypothetical protein Kpol_2000p54 [Vanderwaltozyma polyspora DSM
            70294]
          Length = 2211

 Score = 1295 bits (3350), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 673/1440 (46%), Positives = 928/1440 (64%), Gaps = 98/1440 (6%)

Query: 14   TKKQKLIRSAEEELEAKLGYDLF--------------SEGDKRLGWLLTFASSSLEDEDT 59
            T +Q L  S  +E++  +G++ +              ++   R+GW++    + + ++  
Sbjct: 31   TAQQLLQSSKVDEIDTMMGFERYIPPQFSGSVDPNKLNQVPGRVGWMINMHPTVISEDTL 90

Query: 60   RKVY-----------SCIDLYFVSQDGSTFKSKYKFRPYFYAATKEKMEM-DVEAYLRRR 107
               +           + +D YF+ ++G +FKS   F PYF+    +   + DVE +L++ 
Sbjct: 91   HGTHEGSSNGGNIGIAGVDFYFLDEEGGSFKSSITFNPYFFVTCTDDTRINDVEEFLKKY 150

Query: 108  YESQIADIEILEKEDLDLKNHLSGLHKSYLKISFDTVQQLMDVKKDLLHVVERNQAKFDA 167
             ES +  ++I+ K+DLD+ NHL GL K+ +K+SF    QL + +K L  ++  N+     
Sbjct: 151  LESCLKSVDIIYKDDLDMDNHLVGLKKTLIKLSFINSNQLFEARKLLRPILADNENNKLQ 210

Query: 168  AEAYESILTGKREQRPQDFLDCIVDLREYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLL 227
             + Y   L    + +  D    I D+REYDVPYH+R +ID DVR G+WY V+ +      
Sbjct: 211  RDLYNKNLNN--QGKNVDAKQLIHDIREYDVPYHVRVSIDKDVRVGKWYKVTAAGFIEYT 268

Query: 228  EKRVDLLQRAEVHVCAFDIETTKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDI 287
            EK    +  A+  V AFDIETTK PLKFP +  D IMMISYM+DG+GYLI NRE + EDI
Sbjct: 269  EK----VAFADPVVLAFDIETTKAPLKFPVSSVDQIMMISYMIDGEGYLITNREIISEDI 324

Query: 288  EDLEYTPKPEFEGYFKVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAA 347
            +D EYTPKPE++G F + N  +E+ LL+ +F H+++V+P +  T+NGD+FDWPF+ETR+ 
Sbjct: 325  DDFEYTPKPEYQGIFTIFNEVDELALLQRFFEHIRDVRPTVISTFNGDFFDWPFVETRSK 384

Query: 348  HHGFKMSEELGFQCDKNQGECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDP 407
             HG  M EE+GF  D ++GE ++ +  H+DC+ WVKRDSYLPQGSQGLKAVT++KLGY+P
Sbjct: 385  IHGLDMFEEIGFAPD-SEGEYKSSYCVHMDCYRWVKRDSYLPQGSQGLKAVTQSKLGYNP 443

Query: 408  LEVNPEDMVRFAKEKPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKG 467
            +E++PE M  +A EKPQ ++ YSVSDAVATYYLYM YVHPFIFSL TIIP++PDEVLRKG
Sbjct: 444  IELDPELMTPYAYEKPQYLSEYSVSDAVATYYLYMKYVHPFIFSLCTIIPLNPDEVLRKG 503

Query: 468  SGTLCEMLLMVQAYKANVICPNKHQSDPEKFYRNHLLESETYIGGHVECLESGVFRSDLP 527
            +GTLCEMLLMVQAY+ N++ PNKH    E+FY  HLLESETY+GGHVE LE+GVFRSD+ 
Sbjct: 504  TGTLCEMLLMVQAYQKNIVLPNKHTDPIERFYDGHLLESETYVGGHVESLEAGVFRSDIK 563

Query: 528  TSFKLDPSAYEQLLNNLDRDLQYAIKVEGKMDLESVSNYDEVKNAIMEKLLRLQEEPIRE 587
              FK+DP   + +LN+L   L++A++VE   DL  V+N+DE+KN I  KLL ++    R+
Sbjct: 564  NKFKIDPEVVDDVLNDLTDALKFAVEVENNADLSKVTNFDEIKNDITTKLLDMKNNLDRD 623

Query: 588  ECPLIYHLDVAAMYPNIILTNRLQPPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEIFM 647
            E PLIYH+DVA+MYPNI+ TNRLQP S+ T+  C +CDFNRPGK C R+L+W WRG  F 
Sbjct: 624  ELPLIYHVDVASMYPNIMTTNRLQPDSMKTERDCASCDFNRPGKNCDRRLKWAWRGNFFP 683

Query: 648  GKRSDYYHLKKQIESEFVDGTNGHLSKSFL---DLPKMEQQSRLKDRLKKYCQKAYKRVL 704
             K  +Y  +K+ +++E     N    K FL   +L   +Q + +K RL  Y +K Y R  
Sbjct: 684  SKMDEYNMVKRALQNETFKNKNKFSKKPFLTFDELSYTDQVTHIKKRLTDYSKKVYHRTK 743

Query: 705  DKPVTELREAGICMRENSFYVDTVRSFRDRRYEYKGLNKVWKGKLSEAKASGNSIKIQEA 764
               V E REA +C REN FYV+TVRSFRDRRYE+KGL K WK  +S+   S    K +EA
Sbjct: 744  VAEVVE-REAIVCQRENPFYVNTVRSFRDRRYEFKGLAKTWKQNMSKIDKSDKHAK-EEA 801

Query: 765  QDMVVLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIG 824
            + M+VLYDSLQLAHK ILNSFYGYVMRKG+RWYSMEMAG+   TGA IIQ AR ++E +G
Sbjct: 802  KKMIVLYDSLQLAHKVILNSFYGYVMRKGSRWYSMEMAGITCLTGATIIQMARSVVEGVG 861

Query: 825  KPLELDTDGIWCVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVD 884
            +PLELDTDGIWC+LP SFPEN+ F+ ++  KKL +SYPC MLN  V +  TNDQYQ L+D
Sbjct: 862  RPLELDTDGIWCILPKSFPENYFFELEN-GKKLFMSYPCTMLNYKVHQKFTNDQYQELID 920

Query: 885  PVSKTYETHSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKR 944
            P+   Y+TH++ SI FEVDGPYKAM+LP SKEEG  IKKRYAVFN DG+LAELKGFE+KR
Sbjct: 921  PIRHKYKTHNDNSIFFEVDGPYKAMVLPTSKEEGKGIKKRYAVFNHDGSLAELKGFELKR 980

Query: 945  RGELKLIKVFQAELFDKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISE 1004
            RGEL+LIK FQ ++F  FL G ++E CY AVA VANRWLD+LD +G  + D +LI+ I E
Sbjct: 981  RGELQLIKNFQGDIFKVFLDGDSLESCYKAVADVANRWLDVLDTKGTMLEDEDLIELICE 1040

Query: 1005 SSTMSKSLADYGEQKSCAVTTARRLSDFLGDTMVKDKGLRCQYIVACEPQGTPVSERAVP 1064
            + +MSK+L +Y  QKS ++TTA+RL +FLG+ +VKDKGL+C+YI++ +P   PV+ERA+P
Sbjct: 1041 NRSMSKTLKEYEGQKSTSITTAKRLGEFLGNEIVKDKGLQCKYIISSKPVNAPVTERAIP 1100

Query: 1065 VAIFETDAEIMKFYLRKWC--KTSSDVGIRSIVDWSYYKQRLSSAIQKIITIPAAMQKVS 1122
            VAIF  D ++ + +LR+W    T  D   R+I+DW YY++R++S +QKIITIPAA+Q VS
Sbjct: 1101 VAIFSADIQVKRSFLRRWLMDPTLEDFDPRTIIDWDYYRERVASVVQKIITIPAALQDVS 1160

Query: 1123 NPVPRVVHPDWLYKKVREKEDKFRQRKLVDIFSSLKKDDFLNKTCNAETNLMDENVEDLE 1182
            NPVPRV HP+WL KK+ +K DK +Q       SSL K  F  KT    +N     V D+E
Sbjct: 1161 NPVPRVEHPEWLQKKIAKKNDKSKQ-------SSLNK--FFTKTSELPSN---RKVNDIE 1208

Query: 1183 DFPKKRRNSVNGPRPIVRCFEVNNEQKTVKTTDQVDSLRQQLEPSEVSDQQPSSQNAIDT 1242
            D      +  +G +P V   +V+ ++   K        R+Q    E S   P+   +++ 
Sbjct: 1209 DM---FNSEADGIKPKVA--KVSTKKSIAKRR------REQKTAEEESLVLPTEMPSMEE 1257

Query: 1243 ENIDRIVDYKGWLELKKRKWKDNLDRRKKQKLGSLRASHQANGVSESLGDMINHKEAQRR 1302
                   DY  WL+ +K KWK  + RR + +   L                 N   +  R
Sbjct: 1258 -------DYVAWLKYQKIKWK--IQRRDRNRRAQLFG---------------NSSTSADR 1293

Query: 1303 TGVGSYFRRQETAMTRCHWQIIQLVPSSQSGVFLAWVVVEGIMVRIPITVPRLFYLNSKD 1362
            + +GS  R+Q        W++IQ  PS Q G    +V + G +  +   VP+  Y+  K+
Sbjct: 1294 SMLGSLIRQQAETYANSVWEVIQYKPSGQPGELDVFVNINGKIQLLKFKVPKTIYMKFKN 1353

Query: 1363 ---PI--VEKFPGRRVNKTLPHGR-----RSFNLIEVMIDEDQFRKESKKLAALLADPEV 1412
               P+  ++     + N  LP+       R  +L ++ + E ++  E +   ++L D  V
Sbjct: 1354 ETLPLSKIKSCIAEKSNYLLPNNHVLNYSRDGSLFKLTLPEAEYLNEREDSTSILNDEGV 1413



 Score =  199 bits (506), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 146/614 (23%), Positives = 283/614 (46%), Gaps = 60/614 (9%)

Query: 1415 LGWQQNAAKIGMQRCAASSQWFNERISLARYAHI-------------------------- 1448
            L WQ   A+          QW +  + L+RY++I                          
Sbjct: 1615 LNWQSVLARKICSHILLCGQWLSHLVELSRYSNIPIGNLQLNNIGYIIDILYARKLKSES 1674

Query: 1449 --LWISDDG-VPDLGGTSEE----DECFADEVHQPVLTYPGAYRKVSVELKIHHLSVNAL 1501
              LW +++  + D+GG  +E         + +  P +  P  Y  V++E+ I++L+VN +
Sbjct: 1675 IVLWWNENSPLADIGGIQKEFDLNSSWIMNNLDFPEINNPDVYDNVTLEVSINNLTVNTV 1734

Query: 1502 LKSNQVNEMEGGGL--FGFDQDMNSGPYNNELCGFDETTSSAPAFRVVKQLIQRCLTDAV 1559
            L S  +N+ EG  L   GF  +  SG  ++ L  F + + S+ +  V++ L+ +   D  
Sbjct: 1735 LTSALINDAEGSDLADVGFSNNTESGETSSSL--FIQDSFSSTSLIVLRNLL-KTWWDHA 1791

Query: 1560 TSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEFRKLGATIIFAN 1619
               N  AD ++     W+ +  SKL D  L   ++ + +K    L+ EF  LG+T+++A+
Sbjct: 1792 LKENSTADLLVNSFVSWVQNSDSKLFDGSLRYHVYNLTKKSLLQLMNEFTSLGSTVVYAD 1851

Query: 1620 FSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLFMDQYNYGGIPA 1679
             +K+++ T K   +   AY   ++KA+++   F +++L    +W  L++MD++N+GG+  
Sbjct: 1852 RNKLLVKTSKQSPANCYAYGQYIIKAIRSSTTFTYLDLNIERYWDLLIWMDKFNFGGLAC 1911

Query: 1680 RADESLDDDSQVDIVSSWNIAEYLPKEIQDHF---VLVVSEFMYIPWKHAQKLAASRASL 1736
               E+  +  ++   S W I  +LP   Q  F   +L++ + MY   K  +K   + A  
Sbjct: 1912 VKIENT-EKQELSAYSQWQIKNFLPSIYQSEFDDWMLIILDSMY---KSKEKYLETNAGT 1967

Query: 1737 QEGSSCTPSITVAAAENFESHIVQYVKGEISSYFTGKLLSIVRDAIHHMKKMNNDQHNSP 1796
            Q  +   P       ++  + +  +     +  F   LL  ++    + ++   D   S 
Sbjct: 1968 QRLTQLPPQRNQEIEDDEVTSLNHF-----TDLFNKPLLKRMQKLFRNQQEFILDPQYSQ 2022

Query: 1797 GV---MQTAANIHKVDAPLEFIKHVCAAFALDQNVQHDVLVMRKNLLKYVRVREFAPEAE 1853
                 +   +++   +  LE +K++C    L      +V  +RK LLK   VREF    E
Sbjct: 2023 DYAFPLLPGSHLQMKNPLLELVKYLCHVMLLSSKTILEVRELRKELLKIFEVREFDKSGE 2082

Query: 1854 FRDPCPSFILPNVICSYCNDCRDLDLCRDMALLAQDWHCAMPQCGQPYDREVMENALLQI 1913
            F++P  +  +   +C  C    D+D CR  A  +  ++C   +C +  ++E +E  L+Q 
Sbjct: 2083 FQNPSNNLTISGFLCENCFFISDIDFCR--ADSSTIFNC--DRCQKALNKETLEEHLIQK 2138

Query: 1914 VRQRERLYHLQDLVCIRCNQVKAAHLAEQCACAGSFRCKEDASDFRSKMQIFLNIANRQG 1973
            +      Y +QD  C +C+++K  +++E C+C+G + C    S     +++F  +A+   
Sbjct: 2139 LCSEVEAYIVQDSRCSKCHKIKEDYMSEHCSCSGRWECIIPQSRMLKSLKVFGQVAS--- 2195

Query: 1974 FQLLQECTSWILEV 1987
            +  L+  TS I+EV
Sbjct: 2196 YYKLEGLTSSIMEV 2209


>gi|328722324|ref|XP_001945457.2| PREDICTED: DNA polymerase epsilon catalytic subunit A-like isoform 1
            [Acyrthosiphon pisum]
          Length = 2242

 Score = 1295 bits (3350), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 672/1421 (47%), Positives = 926/1421 (65%), Gaps = 71/1421 (4%)

Query: 18   KLIRSAEEEL-EAKLGYDLFSEGDKRLGWLLTFASSSLEDEDTRKVYSCIDLYFVSQDGS 76
            +L +S E +L + K G+    +  +  G+L+   S+ + DED R V + +D YF+  DGS
Sbjct: 29   RLKQSIENDLIDNKYGFFRVKDYQEHTGYLINMHSTEIVDEDKRLV-AAVDYYFIKDDGS 87

Query: 77   TFKSKYKFRPYFYAATKEKMEMDVEAYLRRRYESQIADIEILEKEDLDLKNHLSGLHKSY 136
             F+    F+PYFY   K++   +V AY+ +++      I+ + KEDLDL NHL GL + Y
Sbjct: 88   RFRVTQPFQPYFYLLAKKEYIQEVVAYISKKFAGSFTCIDTVMKEDLDLPNHLIGLKQRY 147

Query: 137  LKISFDTVQQLMDVKKDLLHVVERNQAKFDAAEAYESILTGK--------REQRPQDFLD 188
            +KISF TV ++  +++ ++  V +N+        Y  +LT            ++  D ++
Sbjct: 148  IKISFATVTEMNKMRQAIMPAVRKNRLALKNNSYYTEMLTESLANLSEVVSSKKQVDHME 207

Query: 189  CIVDLREYDVPYHIRFAIDNDVRCGQWYDVSISSTGP----LLEKRVDLLQRAEVHVCAF 244
             I+D+REYDV YHIR + D  +  G WY  ++   GP       +R D++ R ++ V AF
Sbjct: 208  NIIDIREYDVVYHIRVSTDLKIFTGLWY--TVQCRGPYNQATFTQRDDIIDRPDMIVLAF 265

Query: 245  DIETTKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKV 304
            DIETTKLPLKFPDA+ D IMMISYM+DGQGYLI NRE +  D+ D EYTPKPEFEG F +
Sbjct: 266  DIETTKLPLKFPDANTDQIMMISYMIDGQGYLINNREIISADVVDFEYTPKPEFEGLFTI 325

Query: 305  TNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDKN 364
             N  +E  L+  +F H+ E++P I VTYNGD+FDWPF+ETRAA H   MS+E+GF     
Sbjct: 326  FNEPDEAALINRFFEHIMEIRPHIIVTYNGDFFDWPFVETRAAVHDLNMSQEIGFS-KNT 384

Query: 365  QGECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQ 424
             G    + A H+DC  WVKRDSYLP GSQ LKAV KAKL YDP+E++PEDM R A ++PQ
Sbjct: 385  AGVYSCRPAMHMDCLCWVKRDSYLPVGSQNLKAVAKAKLRYDPVELDPEDMCRLATDEPQ 444

Query: 425  MMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKAN 484
            ++++YSVSDAVATYYLYM YVHPFIF+L TIIPM PDEVLRKGSGTLCE LLMV+A+ AN
Sbjct: 445  VLSNYSVSDAVATYYLYMKYVHPFIFALCTIIPMEPDEVLRKGSGTLCESLLMVEAFHAN 504

Query: 485  VICPNKHQSDPEKFYRN-HLLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQLLNN 543
            +I PNK + +  K   + H+L+ ETY+GGHVE LESGVFR+D+P  F+LD SA++ L+  
Sbjct: 505  IIFPNKQEQELNKLSDDGHVLDQETYVGGHVEALESGVFRADIPCRFRLDTSAFDMLIEK 564

Query: 544  LDRDLQYAIKVEGKMDLESVSNYDEVKNAIMEKLLRLQEEPIREECPLIYHLDVAAMYPN 603
                L++AI+ E K+ ++SV+N DE+   ++EKL  L+ +P     PLIYHLDV AMYPN
Sbjct: 565  ASEILKFAIEEEEKVPMDSVTNLDEILKDVVEKLEALKADPYPLLKPLIYHLDVGAMYPN 624

Query: 604  IILTNRLQPPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYYHLKKQIESE 663
            IILTNRLQP ++V +E+C ACDFN PG  C R + W WRGE+    R+++  +++Q+E+E
Sbjct: 625  IILTNRLQPSAMVNEEICAACDFNIPGAKCQRTMTWQWRGELMPASRTEFQRIQQQLETE 684

Query: 664  FVDGT-NGHLSKSFLDLPKMEQQSRLKDRLKKYCQKAYKRVLDKPVTELREAGICMRENS 722
               G       ++F  L + E+ +  K RL +YC+K YK+     + E R   IC +ENS
Sbjct: 685  KFPGQFPNDPPRAFHQLRRDERATWEKKRLTEYCRKVYKKTHITKIEE-RSTTICQKENS 743

Query: 723  FYVDTVRSFRDRRYEYKGLNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHKCIL 782
            FYVDTVR+FRDRRYEYKGL KV K ++SEA   G+ ++I+ A++  +LYDSLQLAHKCIL
Sbjct: 744  FYVDTVRAFRDRRYEYKGLCKVAKKQISEAITIGDPVEIKSAKNREILYDSLQLAHKCIL 803

Query: 783  NSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLPGSF 842
            NSFYGYVMRKGARW+SMEMAG+V  TGA II+ AR +IEKIG+PLELDTDGIWCVLP +F
Sbjct: 804  NSFYGYVMRKGARWHSMEMAGIVCCTGAAIIKKAREIIEKIGRPLELDTDGIWCVLPSTF 863

Query: 843  PENFTFKTKDLKK-KLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEFE 901
            PEN+  K+   KK K T+S+P  +LN  V  + TN  Y  LVD  +  YE  SE SI FE
Sbjct: 864  PENYNVKSTHTKKTKFTVSFPNAVLNSMVKEHFTNHIYHDLVDSKNLIYEQRSENSIFFE 923

Query: 902  VDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDK 961
            VDGPY AM+LPASKEEG  +KKRYAVFN D +LAELKGFE+KRRGEL++IK+FQ+ +F+ 
Sbjct: 924  VDGPYLAMVLPASKEEGKKLKKRYAVFNLDKSLAELKGFEVKRRGELQIIKIFQSSVFEA 983

Query: 962  FLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLADYGEQKSC 1021
            FL G T+E+CY +VA VA+ WLD+L ++GK++ DSEL + ISE+ +MS+ L DYG QKS 
Sbjct: 984  FLKGDTLEKCYESVATVADYWLDVLYSKGKNMPDSELFELISENRSMSRKLEDYGAQKST 1043

Query: 1022 AVTTARRLSDFLGDTMVKDKGLRCQYIVACEPQGTPVSERAVPVAIFETDAEIMKFYLRK 1081
            +++TA+RL++FLGD MVKDKGL C++I++ +P+GTPV++RA+P+AIF+++  + + YLR+
Sbjct: 1044 SISTAKRLAEFLGDQMVKDKGLACRFIISKKPEGTPVTQRAIPLAIFQSELSVKRHYLRR 1103

Query: 1082 WCKTSS--DVGIRSIVDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLYKKVR 1139
            W   +S  D+ IR ++DW YY +RLS  IQKIITIPA +Q ++NPVPRV HPDWL+KK+ 
Sbjct: 1104 WLGDNSIDDIDIRDVLDWDYYIERLSGTIQKIITIPATLQGIANPVPRVKHPDWLHKKML 1163

Query: 1140 EKEDKFRQRKLVDIFSSLKKDDFLNKTCNAETNLMDEN-VEDLEDFPKKRRNSVNG--PR 1196
             K D  +QRK+  +F ++            + NL +++ ++D+EDF +   N+     PR
Sbjct: 1164 MKADPLKQRKITTMFQAMP--------VRVQDNLTEQHALQDIEDFGENEDNNYVEIRPR 1215

Query: 1197 PIVRCFEVNNEQKTVKTTDQVDSLRQQLEPSEVSDQQPSSQNAIDTENIDRIVDYKGWLE 1256
            PI     V  ++K   +     + ++ L P       PS+             D + W+ 
Sbjct: 1216 PI-----VTKKRKRDPSPIDARNWKEALGPP------PSAS------------DIQNWIV 1252

Query: 1257 LKKRKWKDNLDRRKKQKLGSLRASHQANGVSESLGDMINHKEAQRRTGVGSYFRRQETAM 1316
             +K+KW   L+ R K     +   H      + + D   H    R   +G + RR +  +
Sbjct: 1253 YQKKKWNWQLEMRAK-----IVGKH-----GKRMRDDQIHVPKGRAGTLGGFLRRAQQTL 1302

Query: 1317 TRCHWQIIQLVPSSQSGVFLAWVVVEGIMVRIPITVPRLFYLNSKDP---IVEK-FPGRR 1372
                WQIIQ+  S + GV   W ++   +  I + VPR FY+N +     I EK     +
Sbjct: 1303 LSQPWQIIQVCQSGEPGVLKLWAMIGDELHNIRMNVPRFFYVNQRQTEIDISEKHISCTK 1362

Query: 1373 VNKTLPHGRRSFNLIEVMIDEDQFRKESKKLAALLADPEVE 1413
            VN  LP  R   NL +  + E  F +        L+ P VE
Sbjct: 1363 VNMILPRARPILNLYQYTVLEKDFGETKDHFMCNLSKPGVE 1403



 Score =  293 bits (750), Expect = 7e-76,   Method: Compositional matrix adjust.
 Identities = 187/623 (30%), Positives = 311/623 (49%), Gaps = 56/623 (8%)

Query: 1407 LADPE-VEVLGWQQNAAKIGMQRCAASSQWFNERISLARYA----HILWISDDGVPDLGG 1461
            L  PE + ++  Q    +I +    A    F   I  AR+      +LWIS+   PDLGG
Sbjct: 1619 LNSPENINIMLEQCRYLQIPLGNLPADVTLFASDIFFARHLMKHNFVLWISETDKPDLGG 1678

Query: 1462 TSEEDECF---ADEVHQPVLTYPGAYRKVSVELKIHHLSVNALLKSNQVNEMEGGGL-FG 1517
               +D      ++E    ++   G Y    +EL+I  L V  LL+S+ +++ EG      
Sbjct: 1679 RESDDNRMLMDSEESSSMLVNNEGCYTSYCIELEIDALPVTTLLQSHHIHDFEGTSAGVA 1738

Query: 1518 FDQD--------MNSGPYNNELCGFDETTSSAPAFRVVKQLIQRCLTDAVTSGNVFADAI 1569
            FDQ         M+ G +      +DE    + AFRV++ ++     D V   N FAD  
Sbjct: 1739 FDQIPQASLEEIMDGGTFVTP--TYDEIALCSAAFRVLRSMVNVWFRDVVLHKNPFADFQ 1796

Query: 1570 LQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEFRKLGATIIFANFSKVIIDTGK 1629
            + H YRWL SP++ L+DP L + L+ +M+K+F  L+AEF++LG+TIIFANF+K++I T K
Sbjct: 1797 MVHFYRWLRSPNALLYDPALRKTLYSLMRKLFMQLIAEFKRLGSTIIFANFNKIVICTKK 1856

Query: 1630 FDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLFMDQYNYGGIPARADESLD--- 1686
              L  A  Y   +++ +  +ELF  +++     W  L+++D +NY G+ A+  + L    
Sbjct: 1857 KSLEDAIFYVRYVVQNITNKELFHSLQISLGPCWEYLMWLDLWNYSGVKAKFSDKLKEAM 1916

Query: 1687 -----------------------DDSQVDIVSSWNIAEYLPK--EIQDHFVLVVSEFMYI 1721
                                   D  +V I  +WNI+E+LP     + HF   ++ +M  
Sbjct: 1917 GDIIDMSNEDVEHLLKEHKAPGPDIEEVGIEMNWNISEFLPNVCHARKHFEETIAVYMSA 1976

Query: 1722 PWKHAQKL-AASRASLQEGSSCTPSITVAAAENFESHIVQYVKGEISSYFTGKLLSIVRD 1780
             +KH + + + +   + E  S      +    + ES   +Y K  IS   T +L SI + 
Sbjct: 1977 IYKHMRSIDSVTLNRISESLSQVTQSNMLGVASCES-TAEYAKTVISDELTTRLFSITQK 2035

Query: 1781 AIHHMKKMNNDQHNSPGVMQTAANIHKVDAPLEFIKHVCAAFALDQNVQHDVLVMRKNLL 1840
                   ++ +   +          H ++  L+F+K VC   +LD  ++ D++ ++KNLL
Sbjct: 2036 MYKKYPVLDVELQETLSPFLQNKGKH-LNPALQFVKTVCKVLSLDFGIEEDIMKLKKNLL 2094

Query: 1841 KYVRVREFAPEAEFRDPCPSFILPNVICSYCNDCRDLDLCRD--MALL--AQDWHCAMPQ 1896
            + + V  F+ EA++ DPC S+ LP VIC  CN CRD+DLC+D   ++L   + W C  P 
Sbjct: 2095 RLISVGNFSDEADWTDPCLSWTLPEVICKSCNHCRDIDLCKDSHRSVLNGKKTWLC--PN 2152

Query: 1897 CGQPYDREVMENALLQIVRQRERLYHLQDLVCIRCNQVKAAHLAEQCACAGSFRCKEDAS 1956
            C   YD  ++E+ L+  + ++   Y LQDL C +C+++K  +L   C+CAG++      +
Sbjct: 2153 CNSSYDNMLIEHFLIDALGRKVMAYTLQDLQCTKCSEIKMENLNAYCSCAGNYTTVIPRN 2212

Query: 1957 DFRSKMQIFLNIANRQGFQLLQE 1979
            D  S ++ F  IA+     LLQ+
Sbjct: 2213 DMMSYLKTFKAIADYYDMTLLQQ 2235


>gi|146419966|ref|XP_001485942.1| hypothetical protein PGUG_01613 [Meyerozyma guilliermondii ATCC 6260]
          Length = 2208

 Score = 1294 bits (3349), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 678/1423 (47%), Positives = 914/1423 (64%), Gaps = 87/1423 (6%)

Query: 25   EELEAKLGYDLFSEGD-----KRLGWLLTFASSSLEDEDTRKVYSCIDLYFVSQDGSTFK 79
            +++++ +G++    G+      R GWL+   ++++  ED    YS +D YF+ ++G TFK
Sbjct: 45   DKIDSMMGFNRMDHGELDGTKPRKGWLVNMHTTTVPSEDYLAGYSGVDYYFIDEEGGTFK 104

Query: 80   SKYKFRPYFYAATKEKMEMDVEAYLRRRYES-QIADIEILEKEDLDLKNHLSGLHKSYLK 138
            S  +F PYF+       E +VE  LR+R ES  I  I  + KEDL L NHL GL K+ LK
Sbjct: 105  STIQFDPYFFLLVVPGRESEVEETLRKRLESCNIKSINRVVKEDLSLPNHLVGLKKTLLK 164

Query: 139  ISFDTVQQLMDVKKDLLHVVERNQAKFDAAEAYESI------------LTGKREQRPQDF 186
            + F  +  L+  ++ L  ++  N+ + +  + Y ++            ++        D 
Sbjct: 165  LIFHNISDLLAARRILSPIIRDNEMQNETRDVYSALKISGLNGNTKFDISHSSTNEYTDP 224

Query: 187  LDCIVDLREYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLLEKRVDLLQRAEVHVCAFDI 246
               I D+REYDVPYH+R +ID ++R G+WY V    +   L +  + +  A+  V AFDI
Sbjct: 225  TQLISDIREYDVPYHVRVSIDANIRVGKWYYVYAKHSEVTLVEDKETIAFADPVVLAFDI 284

Query: 247  ETTKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTN 306
            ET K PLKFPD+  D IMMISYM+DG GYLI NR  + EDI+D EYTPKPE+ GYF + N
Sbjct: 285  ETCKAPLKFPDSKTDQIMMISYMIDGDGYLITNRNVIAEDIDDFEYTPKPEYPGYFTIFN 344

Query: 307  VNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDKNQG 366
              +E+ +L+ +F H++EV+P +  T+NGD+FDWP++E RA  H   M EE+GF  D N G
Sbjct: 345  EADEVLMLKRFFEHIREVRPTVIATFNGDFFDWPYVEDRARQHQLDMFEEIGFAKD-NDG 403

Query: 367  ECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQMM 426
            E ++K+  H+DCF WVKRDSYLPQGSQGLKAVT AKLGY+P E++PE M  +A E+PQ++
Sbjct: 404  EYKSKYCVHMDCFRWVKRDSYLPQGSQGLKAVTTAKLGYNPTELDPELMTPYASEQPQLL 463

Query: 427  ASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVI 486
            + YSVSDAVATYYLY  YVHPFIFSL TIIP++PDEVLRKG+GTLCEMLLMVQAY+ N++
Sbjct: 464  SEYSVSDAVATYYLYYKYVHPFIFSLCTIIPLNPDEVLRKGTGTLCEMLLMVQAYQKNIL 523

Query: 487  CPNKHQSDPEKFYRNHLLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQLLNNLDR 546
             PNK+    E+F+  HLLESETY+GGHVE LE+GVFRSDLP  F +DPSA +++L+NL  
Sbjct: 524  LPNKYTDPIERFFEGHLLESETYVGGHVESLEAGVFRSDLPCKFNVDPSAVQEILDNLHN 583

Query: 547  DLQYAIKVEGKMDLESVSNYDEVKNAIMEKLLRLQEEPIREECPLIYHLDVAAMYPNIIL 606
             L++ I+VE K  L+ V NYDE+ N I E LL L+  P+REE PLIYH+DVA+MYPNI+ 
Sbjct: 584  SLRFCIEVENKKSLDDVENYDEIYNKIKETLLDLKNNPVREENPLIYHVDVASMYPNIMT 643

Query: 607  TNRLQPPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYYHLKKQI-ESEFV 665
            +NRLQP S+ ++E C ACDFNRPGKTC R+LEW WRGE +     DY ++K+ + E+   
Sbjct: 644  SNRLQPDSMKSEEDCAACDFNRPGKTCDRRLEWSWRGEFYPTNMGDYNNVKRNLQEANER 703

Query: 666  DGTNGHLSKSFLDLPKMEQQSRLKDRLKKYCQKAYKRVLDKPVTELREAGICMRENSFYV 725
              T       F D+P  +Q   +K+RL +  +K Y R L +  T  R+A +C REN FYV
Sbjct: 704  FQTRSGRRIPFNDMPYPDQAQVIKNRLAEVSKKNYHR-LKQSKTVKRDAIVCQRENPFYV 762

Query: 726  DTVRSFRDRRYEYKGLNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHKCILNSF 785
            +TVR FRDRRYE+K L KVWKGK S+   + +SI  +EA+ MVVLYDSLQLAHK ILNSF
Sbjct: 763  NTVRDFRDRRYEFKTLAKVWKGKSSKMDTT-DSIGREEAKKMVVLYDSLQLAHKVILNSF 821

Query: 786  YGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLPGSFPEN 845
            YGYVMRKG+RWYSMEMAG+   TGAKIIQ AR L+E++G+PLELDTDGIWC+LP SFPEN
Sbjct: 822  YGYVMRKGSRWYSMEMAGITCLTGAKIIQMARSLVERLGRPLELDTDGIWCILPTSFPEN 881

Query: 846  FTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEFEVDGP 905
            +  K KD  KK+ + YPC MLN  V +  TN QYQ LVD  +  Y T SE SI FEVDGP
Sbjct: 882  YNLKCKD-GKKILLEYPCSMLNYLVHQQFTNHQYQDLVDENTFKYSTRSENSIFFEVDGP 940

Query: 906  YKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFLHG 965
            YKAMILP SKEEG  +KKRYAVFNDDG+LAELKGFE+KRRGEL+LIK FQ+++F  FL G
Sbjct: 941  YKAMILPTSKEEGKGLKKRYAVFNDDGSLAELKGFELKRRGELQLIKNFQSDIFKLFLEG 1000

Query: 966  STIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLADYGEQKSCAVTT 1025
             T+E CY AVA+VAN WLD+LD +G  + D +LI+ I E+ +MSKSLA+YG QKS ++TT
Sbjct: 1001 DTLEGCYKAVASVANNWLDVLDTKGGMLEDEDLIELICENRSMSKSLAEYGNQKSTSITT 1060

Query: 1026 ARRLSDFLGDTMVKDKGLRCQYIVACEPQGTPVSERAVPVAIFETDAEIMKFYLRKWCKT 1085
            A+RL +FLG+ MVKD GL C+YI++ +P G P++ERAVPV+IF  + +  + YLR W   
Sbjct: 1061 AKRLGEFLGEEMVKDAGLACKYIISAKPVGKPITERAVPVSIFSHEEK--QKYLRNWLGD 1118

Query: 1086 SSDVGI--RSIVDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLYKKVREKED 1143
             S      RS++DW YY +RL+S +QKIITIPAA+Q V NPVPRV HPDWL KKV   ED
Sbjct: 1119 QSLTSFDPRSVIDWDYYYERLASVVQKIITIPAALQGVKNPVPRVDHPDWLRKKVLASED 1178

Query: 1144 KFRQRKLVDIFSSLKKDDFLNKTCNAETNLMDENVEDLEDFPKKRRNSVNGPRPIVRCFE 1203
            K +Q  +   FS   K+D       AE+ +    ++D+EDF     ++  G R + +   
Sbjct: 1179 KKKQSSIGSFFSKASKED-AAAAAAAESRV----IKDIEDFGSVEYST--GTRKVSKVTS 1231

Query: 1204 -----VNNEQKTVKTTDQVDSLRQQLEPSEVSDQQPSSQNAIDTENIDRIVDYKGWLELK 1258
                 +NN        +++ ++ Q+  P                       DY G+L  +
Sbjct: 1232 RKRKGINNANSDPLEEEKIAAILQKPCPKMTE-------------------DYAGFLAYQ 1272

Query: 1259 KRKWKDNLDRRKKQKLGSLRASHQANGVSESLGDMINHKEAQRRTGVGSYFRRQETAMTR 1318
            K KW+  +  R +++  +L                    +   R+ VG+ +RRQ  ++  
Sbjct: 1273 KAKWR--VQARNRERRRTLFGPSA---------------DTSFRSSVGTLYRRQAESVAG 1315

Query: 1319 CHWQIIQLVPS-SQSGVFLAWVVVEGIMVRIPITVPRLFYLNSKDPIVEKFPGRRV---- 1373
             +W+I+Q  P  S+ G     V     +      +P++ Y   K    E  P RR+    
Sbjct: 1316 SNWEILQYKPDPSKPGALKVHVFSNNKVHTFSFQIPKIVYAALKS---ELSPRRRLREAR 1372

Query: 1374 ----NKTLPHGRRSFNLIEVMIDEDQFRKESKKLAALLADPEV 1412
                N  LP+G  + +L ++ + E  F +E   + +LL    V
Sbjct: 1373 IDPSNAILPNGHDASHLYKITMPEAVFEEEMLLVDSLLQGSTV 1415



 Score =  236 bits (601), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 157/618 (25%), Positives = 285/618 (46%), Gaps = 76/618 (12%)

Query: 1411 EVEVLGWQQNAAKIGMQRCAASSQWFNERISLARYAHI---------------------- 1448
            ++  +GWQ   +K  +        W    IS+++Y +I                      
Sbjct: 1611 KLPAIGWQSLISKRIVNHYFVLGAWIKNLISISKYGNIPLCNLEIDNLGYLIDVEYARRL 1670

Query: 1449 ------LWISDDGVPDLGGTSEEDECFADEVHQPVLTYPGAYRKVSVELKIHHLSVNALL 1502
                  LW S   +PD GG   +     +    P    P  Y   S+E+++  L++N +L
Sbjct: 1671 SMNNVVLWWSPKALPDHGGFENDSAQDYENFDFPQFNNPEVYDTTSLEIELGTLTINTIL 1730

Query: 1503 KSNQVNEMEGGGL----FGFDQDMNSGPYNNELCGFDETTSSAPAFRVVKQLIQRCLTDA 1558
             S  +N  EG  L      FD +  +G   ++       + SAPA ++++ +++    DA
Sbjct: 1731 TSALINGAEGTDLADEVVEFDNNNGAGSIASD-------SFSAPAMQILRSMVKNWWDDA 1783

Query: 1559 VTSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEFRKLGATIIFA 1618
            + + +V ADA++ +L  W+    S L+D  LH  +H +  K    LL EF++LG+ +IFA
Sbjct: 1784 L-NNDVNADALMNNLEMWIQRKESHLYDYALHYQVHNLTIKSLLQLLGEFKRLGSNVIFA 1842

Query: 1619 NFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLFMDQYNYGGIP 1678
            N +KVI+ T K  +    A    L+KA + + LF ++++  V +W  L++MD++N+GG  
Sbjct: 1843 NRNKVILLTPKVSVEQTYASTQYLVKATRAKPLFNFLDMRVVKYWDILVWMDRFNFGGRS 1902

Query: 1679 ARADESLDDDSQVDIVSSWNIAEYLPKEIQDHFVLVVSEFMYIPWKHAQKLAASRASLQE 1738
             + + + +++  + I S+W I ++LP   QD F   V  F+    KH  K     + +  
Sbjct: 1903 CK-EITAEENQNLTIESNWLIKKFLPIMFQDEFEDWVLIFIQALAKHKSKTILQSSQMGR 1961

Query: 1739 GSSCTPSITVAAAENFESHIVQYVKGE-------ISSYFTGKLLSIVR----DAIHHMKK 1787
                T              I   +KG+           +   ++ + R      I  + +
Sbjct: 1962 TQRVT-------------QIAHRIKGKKEDGEENEEDEYNYDVVDVFRLPLLKRIEKLYR 2008

Query: 1788 MNNDQHNSPGVMQ-------TAANIHKVDAPLEFIKHVCAAFALDQNVQHDVLVMRKNLL 1840
              N+   +P + Q         ++++  +  LE +K +CA F+L      +V ++RK+LL
Sbjct: 2009 RQNESIINPELEQEYRFPVLPGSHLNMKNPALELVKFLCAVFSLSHRQNIEVRMLRKDLL 2068

Query: 1841 KYVRVREFAPEAEFRDPCPSFILPNVICSYCNDCRDLDLCRDMALLAQDWHCAMPQCGQP 1900
                V+EF+PEA F+DPC S +L    C YCN  R++D CRD  +    W+C    C + 
Sbjct: 2069 SIFDVKEFSPEANFKDPCVSLVLSQFRCDYCNHVREIDFCRDTEVDV--WNCT--NCHKQ 2124

Query: 1901 YDREVMENALLQIVRQRERLYHLQDLVCIRCNQVKAAHLAEQCACAGSFRCKEDASDFRS 1960
            +++  +E  L+    +    +  QDL C +C Q+K+ +++E C C+G +           
Sbjct: 2125 HNKASLEEQLITQYLKTVTKFQCQDLKCSKCGQIKSDNMSEFCRCSGKWVGTIPYEHIAQ 2184

Query: 1961 KMQIFLNIANRQGFQLLQ 1978
            ++QI+  +A     +LL+
Sbjct: 2185 ELQIYAGVAKAYNLELLR 2202


>gi|448113212|ref|XP_004202294.1| Piso0_001783 [Millerozyma farinosa CBS 7064]
 gi|359465283|emb|CCE88988.1| Piso0_001783 [Millerozyma farinosa CBS 7064]
          Length = 2218

 Score = 1293 bits (3347), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 667/1427 (46%), Positives = 920/1427 (64%), Gaps = 84/1427 (5%)

Query: 14   TKKQKLIRSAEEELEAKLGYDLF----SEGDKRLGWLLTFASSSLEDEDTRKVYSCIDLY 69
            T K+ L+   +  +++ +G+D      S    + GWL+   ++++  ++    Y+ +D Y
Sbjct: 49   TSKRDLVEKVDR-IDSIMGFDRIEYNESNTKPKKGWLINMHTTTVISDEYIPGYAGVDYY 107

Query: 70   FVSQDGSTFKSKYKFRPYFYAATKEKMEMDVEAYLRRRYES-QIADIEILEKEDLDLKNH 128
            F+ ++G +FK   ++ PYF+       E +V+  LR+  E   +  I  L KEDL L NH
Sbjct: 108  FLDEEGGSFKVTKRYDPYFHLVIMPGRESEVDEMLRKMLEGCGLKSIVRLSKEDLSLPNH 167

Query: 129  LSGLHKSYLKISFDTVQQLMDVKKDLLHVVERNQAKFDAAEAYESI-------LTGKREQ 181
            L GL ++ L+++F  +  L++ +K L+ +V+ N+ K D    Y+ +       L G  + 
Sbjct: 168  LVGLKRTLLQLNFHNISDLLNARKILMPIVQDNRMKRDTRNIYQVMNFNNVNNLKGDNDS 227

Query: 182  -------RPQDFLDCIVDLREYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLLEKRVDLL 234
                    P D    I D+REYDVPYH+R +IDND+R G+WY+V++ +   ++E+    +
Sbjct: 228  YFNEYNSEPTDPATLIDDIREYDVPYHVRVSIDNDIRIGKWYNVTVKAHDVIMEEDTGTI 287

Query: 235  QRAEVHVCAFDIETTKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTP 294
              A+  + AFDIETTK PLKFPD+  D IMMISYM+DG+GYLI NRE + EDIED EYTP
Sbjct: 288  AFADPIILAFDIETTKAPLKFPDSKVDQIMMISYMIDGEGYLITNREIISEDIEDFEYTP 347

Query: 295  KPEFEGYFKVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMS 354
            KPE+ G F + N  +E  +L  +F H++E +P +  T+NGD+FDWPF++ RA  H   + 
Sbjct: 348  KPEYPGPFTIFNEPDEKGVLDRFFEHIRETRPTVIATFNGDFFDWPFVDDRARFHDMDLF 407

Query: 355  EELGFQCDKNQGECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPED 414
            EE+GF  D ++GE ++ +  H+DCF WVKRDSYLPQGSQGLKAVT AKLGY+P E++PE 
Sbjct: 408  EEIGFAKD-SEGEYKSNYCAHMDCFRWVKRDSYLPQGSQGLKAVTTAKLGYNPTELDPEL 466

Query: 415  MVRFAKEKPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEM 474
            M  +A EKPQ+++ YSVSDAVATYYLY  YVHPFIFSL TIIP++PDEVLRKG+GTLCEM
Sbjct: 467  MTPYAYEKPQLLSEYSVSDAVATYYLYFKYVHPFIFSLCTIIPLNPDEVLRKGTGTLCEM 526

Query: 475  LLMVQAYKANVICPNKHQSDPEKFYRNHLLESETYIGGHVECLESGVFRSDLPTSFKLDP 534
            LLMVQAYK N++ PNKH    E+FY  HLLESETY+GGHVE LE+GVFRSDLP  F +DP
Sbjct: 527  LLMVQAYKGNILLPNKHSDPIERFYEGHLLESETYVGGHVESLEAGVFRSDLPNDFSIDP 586

Query: 535  SAYEQLLNNLDRDLQYAIKVEGKMDLESVSNYDEVKNAIMEKLLRLQEEPIREECPLIYH 594
            +A ++LL++L   L++ I+VE K  LE + N++E+++ I  KLL L+E P R E PLIYH
Sbjct: 587  TAIDELLSDLPNALKFCIEVENKKKLEDIENFEEIQDQIKSKLLELKENPKRSETPLIYH 646

Query: 595  LDVAAMYPNIILTNRLQPPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYY 654
            +DVA+MYPNI+ +NRLQP S+ ++E C ACDFNRPGKTC R+L W WRGE    + ++Y 
Sbjct: 647  VDVASMYPNIMTSNRLQPDSMKSEEDCAACDFNRPGKTCDRRLPWSWRGEFVPAQMNEYG 706

Query: 655  HLKKQIESEFVDGTNGHL-SKSFLDLPKMEQQSRLKDRLKKYCQKAYKRVLDKPVTELRE 713
             +K+ +++E   G+   L  ++F +LP  EQ   +K RL +Y +K Y RV  +  T  RE
Sbjct: 707  MIKRSLQNETFPGSRPWLPERTFDELPYSEQAQLIKKRLNEYSKKVYHRV-KQSKTVTRE 765

Query: 714  AGICMRENSFYVDTVRSFRDRRYEYKGLNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDS 773
            A +C REN FYV+TVRSFRDRRYE+K L KVWK K S      N+I   EA+ MVVLYDS
Sbjct: 766  AIVCQRENPFYVNTVRSFRDRRYEFKTLAKVWKNKTSSV-PKNNTIGRDEAKKMVVLYDS 824

Query: 774  LQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDG 833
            LQLAHK ILNSFYGYVMRKG+RWYSMEMAG+   TGA IIQ AR L+E++G+PLELDTDG
Sbjct: 825  LQLAHKVILNSFYGYVMRKGSRWYSMEMAGITCLTGATIIQMARSLVERLGRPLELDTDG 884

Query: 834  IWCVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETH 893
            IWC+LP SFPEN+ FKTKD  KKL + YPC MLN  V +  TN QYQ LVDP +  Y T 
Sbjct: 885  IWCILPSSFPENYNFKTKD-GKKLFLEYPCSMLNYIVHQRFTNHQYQDLVDPATFKYSTR 943

Query: 894  SECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKV 953
            SE SI FEVDGPYKAM+LP SKEE   +KKRYAVFN DG+LAELKGFE+KRRGEL+L+K 
Sbjct: 944  SENSIFFEVDGPYKAMVLPTSKEEDKGLKKRYAVFNHDGSLAELKGFELKRRGELQLVKN 1003

Query: 954  FQAELFDKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLA 1013
            FQ+++F  FL G T+EECY +VA VAN WLD+LD +G  + D +LI+ I E+ +MSKSL 
Sbjct: 1004 FQSDIFKLFLEGKTLEECYKSVAIVANNWLDVLDTKGGMLEDEDLIELICENKSMSKSLE 1063

Query: 1014 DYGEQKSCAVTTARRLSDFLGDTMVKDKGLRCQYIVACEPQGTPVSERAVPVAIFETDAE 1073
            +YG QKS ++TTA+RL +FLG+ MVKD GL C+YI++ +P G+PV++RA+PV+IF +D +
Sbjct: 1064 EYGNQKSTSITTAKRLGEFLGEEMVKDAGLVCKYIISEKPLGSPVTDRAIPVSIFSSDKK 1123

Query: 1074 IMKFYLRKWCKTSS--DVGIRSIVDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHP 1131
              +F+L+KW K  S  +   RS++DW YY  RL+S +QKII+IPAA+Q V NPVPRV HP
Sbjct: 1124 --EFFLKKWLKDPSLDNFDPRSVIDWKYYYDRLASVVQKIISIPAALQGVKNPVPRVPHP 1181

Query: 1132 DWLYKKVREKEDKFRQRKLVDIFSSLKKDDFLNKTCNAETNLMDENVEDLEDFPKKRRNS 1191
            DWL +++  +ED  +Q  + + F    K + L +            ++D+EDF       
Sbjct: 1182 DWLQRRINIREDSKQQSSIGNFFQKGSKTEELRR-----------QIQDIEDF-----GE 1225

Query: 1192 VNGPRPIVRCFEVNNEQKTVKTTDQVDSLRQQLEPSEVSDQQPSSQNAIDTENIDRIVDY 1251
            V       +  +V + ++     + V            S++   S   ++      +VDY
Sbjct: 1226 VGSGVRKSKVGKVTSRKRKAHAANHVAE----------SEEDERSIAVLNGPCPSPLVDY 1275

Query: 1252 KGWLELKKRKWK---DNLDRRKKQKLGSLRASHQANGVSESLGDMINHKEAQRRTGVGSY 1308
             G+L+ +K KW+     ++RRKK    ++  S+                    R+ VG  
Sbjct: 1276 VGFLQYQKAKWRVQEKKMERRKKLFGENITTSY--------------------RSSVGDM 1315

Query: 1309 FRRQETAMTRCHWQIIQL-VPSSQSGVFLAWVVVEGIMVRIPITVPRLFYLNSKDPIVEK 1367
             R+Q   +    W+IIQ     +  G    +V     +      +P+  + + K  +  K
Sbjct: 1316 MRKQAEKVAGSDWEIIQYKADPATPGDVKVYVSAHNKVHTFTFHIPKQIFASFKTELSPK 1375

Query: 1368 FPGR-----RVNKTLPHGRRSFNLIEVMIDEDQFRKESKKLAALLAD 1409
               R     R +  LP+G     L ++ + E  + +E  K+  LL D
Sbjct: 1376 KSIRDCEIERSSAILPNGHDGTYLYKLTMPETVYAEEINKIEGLLND 1422



 Score =  258 bits (659), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 181/684 (26%), Positives = 325/684 (47%), Gaps = 81/684 (11%)

Query: 1352 VPRLFYLNSKDPIVEKFPGRRVNKTL-----PHGRRSFNLIEVMIDEDQFRKESKKLAAL 1406
            +P+L  L   D  + K    R NK +     P+  R   ++EV+    ++      ++ L
Sbjct: 1566 MPKL--LKKLDSTISKIDESRSNKAILAVQSPYTSR---ILEVLKSSSEYPVIRMNISEL 1620

Query: 1407 LADPEVEVLGWQQNAAKIGMQRCAASSQWFNERISLARYAHI------------------ 1448
                 +  +GWQ    K  +      + W  + ISL+RY+++                  
Sbjct: 1621 T----LPAIGWQSLIIKRVVNHYFVLATWLRKLISLSRYSNVPLCNLQIENMGYLIDMEY 1676

Query: 1449 ----------LWISDDGVPDLGGTSEEDECFADEVHQPVLTYPGAYRKVSVELKIHHLSV 1498
                      LW+S   +PD GG   + +   + +  P +  P  Y    +E++I  L++
Sbjct: 1677 ARRLSENNIVLWLSSKPLPDHGGFENDRQSSFNSIDFPTINNPEIYETTCLEIEIGTLTI 1736

Query: 1499 NALLKSNQVNEMEGGGLFGFDQDMNSGPYNNELCGFDETTSSAPAFRVVKQLIQRCLTDA 1558
            N +L S+ +NEMEG  L     D+     NN      E + SAPA  +++ +++    DA
Sbjct: 1737 NTILTSSLINEMEGTDL---ADDVIEFDKNNGASTMAEDSFSAPALSILRAMVKDWWEDA 1793

Query: 1559 VTSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEFRKLGATIIFA 1618
            + + N  AD+++  L  W+    S L+D  LH  +  +  K    L+ EF+++ A ++FA
Sbjct: 1794 LRN-NENADSMMNSLVTWVQRSDSLLYDYALHYHVQNLTMKALLQLIGEFKRMNAHVVFA 1852

Query: 1619 NFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLFMDQYNYGGIP 1678
            N +K+I+ T K  +  + AY   L+ A +++ LF ++++    +W  L++MD+YNYGG  
Sbjct: 1853 NRNKLILQTSKVSVENSYAYGQYLVTATRSKPLFNFLDIRITRYWDLLIWMDEYNYGGRC 1912

Query: 1679 ARADESLDDDSQVDIVSSWNIAEYLPKEIQDHFVLVVSEFMYIPWKHAQKLAASRASLQE 1738
                 S +D   +  V+ W I ++LP   Q+ F   +  F+         L  ++     
Sbjct: 1913 CLEITS-NDVQNLFPVNQWQIKKFLPIIFQNEFEDWIIIFL-------DALVKNKNESLS 1964

Query: 1739 GSS--CTPSITVAAAENFESHIVQYVKGEISS----YFTGKLLSIVRDA----IHHMKKM 1788
            G+S   TP IT  A      H+++ ++ + ++     +   ++ I R      I  + + 
Sbjct: 1965 GNSQIATPRITQVA------HLMKNLQNQAANDDQEDWANGVIEIFRKPLTRRIAKLYRK 2018

Query: 1789 NNDQHNSPGVMQTAA-------NIHKVDAPLEFIKHVCAAFALDQNVQHDVLVMRKNLLK 1841
             N+   +P +    A       +IH     LE +K + A F+L ++   +V V+RK LL 
Sbjct: 2019 QNESILNPELKNEYAFPKLPGSHIHMKSPCLELVKFLVAVFSLSKSRTIEVRVLRKELLA 2078

Query: 1842 YVRVREFAPEAEFRDPCPSFILPNVICSYCNDCRDLDLCRDMALLAQDWHCAMPQCGQPY 1901
               V+EF+PE+ F +P  S  +P+VIC YCN  RD+D CRD  +    W+C   QC +PY
Sbjct: 2079 IFDVKEFSPESVFVNPSVSLTVPSVICDYCNYIRDIDFCRDEEI--NLWNCT--QCQKPY 2134

Query: 1902 DREVMENALLQIVRQRERLYHLQDLVCIRCNQVKAAHLAEQCACAGSFRCKEDASDFRSK 1961
            +R  +E  L+    +    ++LQD  C +C+Q+++ +++E C C+G +    D  D  +K
Sbjct: 2135 NRVSLEEQLVSEFYKMLTQFYLQDFKCSKCHQIRSDNMSEYCKCSGEWVESVDRRDMETK 2194

Query: 1962 MQIFLNIANRQGFQLLQECTSWIL 1985
            +  F+NIA+     LL++    +L
Sbjct: 2195 LNTFVNIADYFKLHLLKDLIEEVL 2218


>gi|346979105|gb|EGY22557.1| DNA polymerase epsilon catalytic subunit A [Verticillium dahliae
            VdLs.17]
          Length = 2218

 Score = 1291 bits (3341), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 672/1415 (47%), Positives = 919/1415 (64%), Gaps = 89/1415 (6%)

Query: 27   LEAKLGYDLFSEGDKRL-GWLLTFASSSLEDEDTRKVYSCIDLYFVSQDGSTFKSKYKFR 85
            ++  +G+     G +R  GWL+  A+              +D  F+   G+TFK+  ++ 
Sbjct: 56   IDEAMGFARHEGGGRRCKGWLVNRAA--------------LDWSFMEDGGATFKATVEYE 101

Query: 86   PYFYAATKEKMEMDVEAYLRR-RYESQIADIEILEKEDLDLKNHLSGLHKSYLKISFDTV 144
            PYF  A K+  E +VE +L+R   +  +  I  +EKEDL + NHL G  + +L++ F  V
Sbjct: 102  PYFLVAVKKGRESEVEEWLKRVPGDGCVKTIRRVEKEDLKVPNHLLGYRRPFLELRFLNV 161

Query: 145  QQLMDVKKDLLHVVERNQAKFDAAEAYESILTGK---------REQRPQ------DFLDC 189
              L+  ++D++ +  +N+   D  EAY  + T           RE   +      D  D 
Sbjct: 162  NDLLAARRDIMPIAAKNKKNVDVMEAYAEVATANGDIDLFDDSREDDRRANASFADASDF 221

Query: 190  IVDLREYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLLEKRVDLLQRAEVHVCAFDIETT 249
            IVD+REYDVPYH+R  ID ++R G+WY V        +    + L  A+  V A+DIET+
Sbjct: 222  IVDIREYDVPYHVRVMIDLNIRVGKWYLVDSKHGVTSIICNEERLAMADPVVMAYDIETS 281

Query: 250  KLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNVNN 309
            KLPLKFPDA  D IMMISYM+DGQG+LI NRE V EDI D EYTPKPE+ G F + N  +
Sbjct: 282  KLPLKFPDAATDQIMMISYMIDGQGFLITNREIVSEDISDFEYTPKPEYPGAFMIFNEKD 341

Query: 310  EIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCD-KNQGEC 368
            E  ++  +F H++E +P +  TYNGD+FDWPF+ETRA+ HG  M +E+G++ + ++Q +C
Sbjct: 342  EKNVIERFFEHIKEARPTVIATYNGDFFDWPFVETRASFHGIDMYQEIGWKKNSEDQYQC 401

Query: 369  RAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQMMAS 428
               +  H+DCF WV RDSYLPQGS+GLKAVT AKLGYDP E++PE M  +A E+PQ +A 
Sbjct: 402  --SYGVHMDCFHWVNRDSYLPQGSRGLKAVTVAKLGYDPDELDPELMTPYAAERPQTLAE 459

Query: 429  YSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVICP 488
            YSVSDAVATYYLYM YVHPF+FSL TI+P+  D+ LRKG+GTLCEMLLMVQAY+  ++ P
Sbjct: 460  YSVSDAVATYYLYMKYVHPFVFSLCTILPLGGDDTLRKGTGTLCEMLLMVQAYERKIVLP 519

Query: 489  NKHQSDPEKFYRNHLLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQLLNNLDRDL 548
            NKH +  E F+  HLL+SETY+GGHVE +E+GVFR+D+P +F +DP+A ++LL++LD  L
Sbjct: 520  NKHMAPKEAFWDGHLLDSETYVGGHVESIEAGVFRADIPVNFAVDPTAVDELLHDLDSAL 579

Query: 549  QYAIKVEGKMDLESVSNYDEVKNAIMEKLLRLQEEPIREECPLIYHLDVAAMYPNIILTN 608
            ++ I+VE K  +  V NY+EVK  +  +L  L+E P R E PLIYHLDVA+MYPNI+ TN
Sbjct: 580  RFTIEVEEKKSMADVENYEEVKAQVAARLQALKETPNRMERPLIYHLDVASMYPNIMTTN 639

Query: 609  RLQPPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYYHLKKQIESEFVDGT 668
            RLQP S+V +  C ACDFNRPGKTC R+L W WRGE    KR +Y  ++  +ESE   G 
Sbjct: 640  RLQPDSMVQESDCAACDFNRPGKTCDRRLPWSWRGEYIPAKRDEYNMIRNALESEKFPGK 699

Query: 669  NGHLS-KSFLDLPKMEQQSRLKDRLKKYCQKAYKRVLDKPVTELREAGICMRENSFYVDT 727
              +   + F DL + EQ + ++ RL+ Y QK Y ++ D  +   +EA IC REN FY++T
Sbjct: 700  YPNSPMRPFQDLSQDEQTALIRKRLQMYSQKIYHKIHDSTIIT-KEAIICQRENPFYINT 758

Query: 728  VRSFRDRRYEYKGLNKVWKGKLSEAKASG-NSIKIQEAQDMVVLYDSLQLAHKCILNSFY 786
            VR FRDRRY+YKG  KVWKGK    K+SG +S +++ A+ M++L+DSLQLAHK ILNSFY
Sbjct: 759  VRDFRDRRYDYKGKAKVWKGKTEALKSSGASSTEVEAAKKMIILFDSLQLAHKVILNSFY 818

Query: 787  GYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLPGSFPENF 846
            GYVMRKG+RWYS+EMAGV   TGA IIQ AR L+E++G+PLELDTDGIWC+LP +FPENF
Sbjct: 819  GYVMRKGSRWYSLEMAGVTCLTGATIIQLARGLVERLGRPLELDTDGIWCMLPATFPENF 878

Query: 847  TFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEFEVDGPY 906
            +FK K   KK+T+SYPCVMLN  V    TN QYQTLVD  +  YETHS+ SI FEVDGPY
Sbjct: 879  SFKMKG-GKKVTVSYPCVMLNHLVHAKFTNHQYQTLVDEKTFKYETHSDNSIFFEVDGPY 937

Query: 907  KAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFLHGS 966
            KAM+LP SKEE   +KKRYAVFNDDG+LAELKGFE+KRRGELKLIK+FQ ++F  FL G+
Sbjct: 938  KAMVLPTSKEEDKNLKKRYAVFNDDGSLAELKGFEVKRRGELKLIKIFQQQIFKFFLEGT 997

Query: 967  TIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLADYGEQKSCAVTTA 1026
            T+ ECY+AVA VANRWLD+L ++G  + D EL++ ISE+ +MSK+L +YG QKS ++TTA
Sbjct: 998  TLAECYTAVAKVANRWLDILHSKGASLEDEELMELISENRSMSKTLEEYGSQKSTSITTA 1057

Query: 1027 RRLSDFLGDTMVKDKGLRCQYIVACEPQGTPVSERAVPVAIFETDAEIMKFYLRKWCKTS 1086
            +RL+DFLG+ MVKDKGL C++I+   P+  PV+ERAVPVAIF  + +  + YL+KW K  
Sbjct: 1058 KRLADFLGEQMVKDKGLNCKFIICARPKNAPVTERAVPVAIFSAEEQTKRAYLKKWLKEE 1117

Query: 1087 -SDVGIRSIVDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLYKKVREKEDKF 1145
             +D   R+++DW YY +RL S IQK+ITIPAA+QKV NPVPRV HPDWL +++  K+DK 
Sbjct: 1118 PADTDPRALLDWDYYLERLGSVIQKLITIPAALQKVRNPVPRVPHPDWLQRRINIKDDKM 1177

Query: 1146 RQRKLVDIFSSLKKDDFLNKTCNAETNLMDENVEDLEDFPKKRRNSVNGPRPIVRCFEVN 1205
            +Q+K+ D+F+    +D         TNL     ED+EDF  K    +  P+ +      +
Sbjct: 1178 KQKKMTDMFTKGPLEDI--------TNLNGRGAEDMEDFGTK----LLKPKTVTSLVAAS 1225

Query: 1206 NEQKTVKTTDQVDSLRQQLEPSEVSDQQPSSQNAIDTENIDRIVDYKGWLELKKRKWKDN 1265
                T +        R+  EP+E  D   +    + + +     +Y  +LE +K+KWK  
Sbjct: 1226 QSAATSQK-------RKSPEPTESLDPFAALPKTMPSPS----ENYPAFLEYQKQKWKIQ 1274

Query: 1266 LDRR--KKQKLGSLRASHQANGVSESLGDMINHKEAQRRTGVGSYFRRQETAMTRCHWQI 1323
               R  +++  G  R + Q+N                    + + F  Q       +W +
Sbjct: 1275 RQARIQRRKLFGDRRNNMQSN--------------------IQTTFMHQAHNTFTNNWHL 1314

Query: 1324 IQLVPSSQSGVFLAWVVVEGIMVRIPITVPRLFYLNSK-----DPIVEKFPGRRVNKTLP 1378
            + L  +   GV  A+V++   +  + I VPR+ +LN K     D  +      +VN TLP
Sbjct: 1315 LHLKTTETPGVVNAYVLIHAKIHTVKIKVPRVVFLNLKSNDMPDVDIAGCEVEQVNHTLP 1374

Query: 1379 HGRRSFNLIEVMIDEDQFRKESKKLAALLADPEVE 1413
            +G  S +L ++ + ED +  E+   + L   P VE
Sbjct: 1375 NGHSSTHLFKLTVPEDVYFNEADSFSTLFNHPSVE 1409



 Score =  252 bits (643), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 164/614 (26%), Positives = 291/614 (47%), Gaps = 50/614 (8%)

Query: 1408 ADPEVEVLGWQQNAAKIGMQRCAASSQWFNERISLARYAHI------------------- 1448
             D  +  LGWQ  AA+  +        W    +SLARY  +                   
Sbjct: 1606 TDSSLPPLGWQTVAARRLVGHYLGLGSWVMHLMSLARYGDVPLCNLERDDPRFLIDIAYA 1665

Query: 1449 ---------LWISDDGVPDLGGTSEEDECFADE-VHQPVLTYPGAYRKVSVELKIHHLSV 1498
                     LW S    PD  G  ++D     E V  P +  PG +  V ++L++ +L++
Sbjct: 1666 RRLQNNNVVLWWSASPRPDHAGYEKDDVTGPLETVSMPNVNKPGTFASVCIDLEVRNLAI 1725

Query: 1499 NALLKSNQVNEMEGGGLFGFDQDMNSGPYNNELCGFDETTSSAPAFRVVKQLIQRCLTDA 1558
            N +L S+ +N++EG     F+    +G   +E+  FD   ++A    V++++++    +A
Sbjct: 1726 NTILTSSLINDLEGADSVSFNPAAEAGANADEVISFDNAFANAGVL-VLREMVKAWWVEA 1784

Query: 1559 VTSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEFRKLGATIIFA 1618
               GN  AD ++QHL RW+ SP S L+D  LH  +  + +K F  L+ +FRK+G+ +IFA
Sbjct: 1785 C-KGNTMADVMVQHLVRWVESPDSFLYDRALHYYVQMMSRKAFQQLMGDFRKVGSQVIFA 1843

Query: 1619 NFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLFMDQYNYGGIP 1678
            N +++++ T K ++  A AY + ++K+++++ LF +I+LE   +W  L++ D++NYGG  
Sbjct: 1844 NSNRLLLQTTKAEVGTAYAYSNYVIKSIKSKPLFHFIDLEIKEYWDYLVWYDEFNYGG-- 1901

Query: 1679 ARADESLDDDSQ-VDIVSSWNIAEYLPKEIQDHFVLVVSEFMYIPWKHAQKLAASRASLQ 1737
                E ++ D+Q ++ +  W ++ +LP+ +Q  F   V EF+ +  ++ +       S Q
Sbjct: 1902 KACQEVVEADNQNLETIMHWQMSTFLPERLQPIFQEWVIEFINLMHRNKRAFDIEDFSTQ 1961

Query: 1738 EGSSCTPSITVAAAENFESHIV--QYVKGEISSYFTGKLLSIVRDAIHHMKKMNNDQHNS 1795
              +   PS       N ES ++  +  +  +    +  L    R+ +H     +      
Sbjct: 1962 RLTQLPPS---RKDPNDESALLLGKSFEKPLKKTISNLLAVQKRELLHPELAGDYSFPVL 2018

Query: 1796 PG---VMQTAANIHKVDAPLEFIKHVCAAFALDQNVQHDVLVMRKNLLKYVRVREFAPEA 1852
            PG      T     +    LE +K +    +LD+N+  +  ++RK LL    VREF+  A
Sbjct: 2019 PGSHLATYTDGAGARSGPLLELVKSLMQVLSLDRNITLEARLLRKELLAMFDVREFSKGA 2078

Query: 1853 EFRDPCPSFILPNVICSYCNDCRDLDLCRDMALLA------QDWHCAMPQCGQPYDREVM 1906
             F++P  S  +P + C  C   RD+D CRD  LL       + W C    C   YDR  +
Sbjct: 2079 TFQNPSASLKMPQLSCDVCTMARDMDFCRDADLLPDQGQTHKPWRCGF--CEAEYDRNTI 2136

Query: 1907 ENALLQIVRQRERLYHLQDLVCIRCNQVKAAHLAEQCACAGSFRCKEDASDFRSKMQIFL 1966
            E  L+  V      +  QD+ C +C  ++     E C C+G++       D   K+ ++ 
Sbjct: 2137 EERLIAQVEGFAVEWASQDVQCEKCRALRLNEFMEHCVCSGAWVESVSREDILKKVAVYG 2196

Query: 1967 NIANRQGFQLLQEC 1980
            N+A   G ++L+E 
Sbjct: 2197 NVAKFYGLRMLKEV 2210


>gi|393246094|gb|EJD53603.1| DUF1744-domain-containing protein [Auricularia delicata TFB-10046
            SS5]
          Length = 2220

 Score = 1290 bits (3338), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 688/1490 (46%), Positives = 919/1490 (61%), Gaps = 126/1490 (8%)

Query: 10   DGRRTKKQKLIRSAEEELEAKLGYDLFSEGDKRLGWLLTFASSSLEDEDTRKVYSCIDLY 69
            DG R +++     A ++++AKLG+    +G K+ GWL+    + ++D D     + +D Y
Sbjct: 43   DGTRQEERYEEIRARDDIDAKLGFARLDDGPKQEGWLVNMQPTLVKDPDWPTGRAAVDFY 102

Query: 70   FVSQDGSTFKSKYKFRPYFYAATKEKMEMDVEAYLRRRYESQIADIEILEKEDLDLKNHL 129
            F+  DG  FK  Y++ PYFY A K   E  VE +L ++YE  +  +   +KEDL L NHL
Sbjct: 103  FIQDDGGMFKCTYEYDPYFYIACKLGTETVVEEWLMKKYEGLLIRVVRQKKEDLKLPNHL 162

Query: 130  SGLHKSYLKISFDTVQQLMDVKKDLLHVVERNQAKFDAAEAYESILTGKREQRPQ----- 184
             G  K YL++ F  V  L+ V++D++ +   N AK +A +AY  ++  +   R Q     
Sbjct: 163  MGHRKLYLQLCFKNVTDLLAVRRDIMPLALANSAKMNAVDAYAEVVNAEAALRVQWEQEA 222

Query: 185  ---------------DFLDCIVDLREYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLLEK 229
                           D  + IVD+RE+DVPY +R AIDN++R G WY V+ S+  P + +
Sbjct: 223  RTEAWGADGEVHKDKDPRESIVDIREFDVPYFLRVAIDNEIRVGLWYTVTFSAGKPTITR 282

Query: 230  RVDLLQRAEVHVCAFDIETTKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIED 289
                +QRAE  V A+DIETTK PLKFPD   D +MMISYM+DGQG+LI NR+ + EDI+D
Sbjct: 283  LESRVQRAEPVVMAYDIETTKAPLKFPDQQIDQVMMISYMIDGQGFLITNRDIISEDIDD 342

Query: 290  LEYTPKPEFEGYFKVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHH 349
             EYTPK  +EG F V N  +E   ++ +F H+Q  KP +  T+NGD+FD+PFL  RA  H
Sbjct: 343  FEYTPKEGYEGPFTVFNEPDEAATIKRFFQHIQTAKPTVMATFNGDFFDFPFLCARAKVH 402

Query: 350  GFKMSEELGFQCDKNQGECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLE 409
               M  E GF  D ++ E ++    H+DCF WVKRDSYLPQGSQGLKAVT AKLGY+P+E
Sbjct: 403  DIDMLLETGFAKD-SEDEFKSNTCVHMDCFRWVKRDSYLPQGSQGLKAVTTAKLGYNPIE 461

Query: 410  VNPEDMVRFAKEKPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSG 469
            ++PE M  +A E+PQ +A YSVSDAVATYYLYM YVHPFIFSL TIIP+ PDEVLRKGSG
Sbjct: 462  LDPELMTPYALEQPQTLAQYSVSDAVATYYLYMKYVHPFIFSLCTIIPLRPDEVLRKGSG 521

Query: 470  TLCEMLLMVQAYKANVICPNKHQSDPEKFYRNHLLESETYIGGHVECLESGVFRSDLPTS 529
            TLCE LLMV+AY+A VI PNKH+      +  HLL SETY+GGHVE LE+GVFR+D+PT 
Sbjct: 522  TLCETLLMVEAYRAGVIFPNKHEDPHGNTFEGHLLASETYVGGHVEALEAGVFRADIPTH 581

Query: 530  FKLDPSAYEQLLNNLDRDLQYAIKVEGKMDLESVSNYDEVKNAIMEKLLRLQEEPIREEC 589
            FK+ PSA ++L++ LD  L++ I  E KMD+  V+NY+++K+ I   L  +++ P+R + 
Sbjct: 582  FKIVPSACQELIDGLDAALKFCIVEESKMDIADVTNYEDIKSQIQSALEEMRDNPMRMDK 641

Query: 590  PLIYHLDVAAMYPNIILTNRLQPPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEIFMGK 649
            P IYHLDVAAMYPNI+L+NRLQP S+V +  C  CD+NRPGKTC R++ W WRGE +  +
Sbjct: 642  PRIYHLDVAAMYPNIMLSNRLQPDSVVDEATCAVCDYNRPGKTCDRRMTWAWRGEYYPAQ 701

Query: 650  RSDYYHLKKQIESE-FVDGTNGHLSKSFLDLPKMEQQSRLKDRLKKYCQKAYKRVLDKPV 708
            R +Y  ++  +  E F     G   + F++L + EQ + L  RL  Y +K YK+  +  V
Sbjct: 702  RDEYNMIRHALAQEMFPPRRPGLPKRRFVELGEAEQAALLHKRLGDYSRKVYKKTKETRV 761

Query: 709  TELREAGICMRENSFYVDTVRSFRDRRYEYKGLNKVWKGKLSEAKASGNSIKIQEAQDMV 768
             E REA IC REN FYV+TVR+FRDRRYEYKGL+K WK  L    + G+   I+EA+ M+
Sbjct: 762  VE-REAIICQRENPFYVETVRTFRDRRYEYKGLHKTWKKNLDNLASGGSVADIEEAKKMI 820

Query: 769  VLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLE 828
            VLYDSLQLAHKCILNSFYGYV RKGARW SMEMAG+   TGA IIQ AR L+E+IG+PLE
Sbjct: 821  VLYDSLQLAHKCILNSFYGYVNRKGARWQSMEMAGITCLTGAHIIQMARQLVEQIGRPLE 880

Query: 829  LDTDGIWCVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSK 888
            LDTDGIWC+LP  FPE+FTF+     K L  SYPC MLN  V    TN QY  L +  + 
Sbjct: 881  LDTDGIWCMLPDVFPEDFTFQVSK-GKPLKFSYPCTMLNHLVHDKFTNHQYHDL-EKETG 938

Query: 889  TYETHSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGEL 948
             ++ HSE SI FE+DGPY AMILP+SKEE  L+KKRYAVFN D +LAELKGFE+KRRGEL
Sbjct: 939  EFKVHSENSIFFELDGPYLAMILPSSKEEDKLLKKRYAVFNYDKSLAELKGFEVKRRGEL 998

Query: 949  KLIKVFQAELFDKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTM 1008
            +LIK+FQ+E+FDKFL GST EECY+AVA +AN+WLD+L ++   ++D EL + I+E+ +M
Sbjct: 999  QLIKIFQSEIFDKFLLGSTTEECYAAVAEIANQWLDILFSRANSMSDDELFELIAENRSM 1058

Query: 1009 SKSLADYGEQKSCAVTTARRLSDFLGDTMVKDKGLRCQYIVACEPQGTPVSERAVPVAIF 1068
            S++LA+Y  QKS +++TA+RL++FLG+ MVKDKGL C++I++ +P G PV+ERAVPVAIF
Sbjct: 1059 SRTLAEYAGQKSTSISTAKRLAEFLGEQMVKDKGLACKFIISAKPIGAPVTERAVPVAIF 1118

Query: 1069 ETDAEIMKFYLRKWCKTSS--DVGIRSIVDWSYYKQRLSSAIQKIITIPAAMQKVSNPVP 1126
              D  + + YLR+W K +S     +RSI+DW YY +RL S IQK+ITIPAAMQKVSNPVP
Sbjct: 1119 SADEAVKRTYLRRWLKDNSLSTFDLRSILDWDYYIERLGSVIQKLITIPAAMQKVSNPVP 1178

Query: 1127 RVVHPDWLYKKVREKEDKFRQRKLVDIFSSLKKDDFLNKTCNAETNLMDENVEDLEDFPK 1186
            R+ HPDWL+K+V   +DKF Q K+ D F                              P 
Sbjct: 1179 RIRHPDWLFKRVAALDDKFHQHKVTDFFK-----------------------------PA 1209

Query: 1187 KRRNSVNGPRPIVRCFEVNNEQKTVKTTDQVDSLRQQLEPSEVSDQQPSSQNAIDTENID 1246
             +++  NG        + + E           + +  L        +      I   N  
Sbjct: 1210 TKQSHANG--------DFDMEDIAGGGRGGSSAKKAALAKVTKKAPKSKPPPVIPDPN-- 1259

Query: 1247 RIVDYKGWLELKKRKWKDNLDRRKKQKLGSLRASHQANGVSESLGDMINHKEAQRRTGVG 1306
               DY G+L   +  W               R  H A   SE+              G+ 
Sbjct: 1260 --KDYSGYLRAMRPIW---------------RERHAARATSENT------------IGMP 1290

Query: 1307 SYFR----RQETAMTRCHWQIIQLVPSSQSGVFLAWVVVEGIMVRIPITVPRLFYLNSKD 1362
            S FR    R  TA     W ++Q+ P+   G F  W+     +V I + +PR FY+N K 
Sbjct: 1291 SMFRGARIRSYTA-----WDVVQIRPTRIPGRFALWLSTGSDLVSITLRIPREFYINLKR 1345

Query: 1363 PIVEKF--PG---RRVNKTLPHGRRSFNLIEVMIDEDQFRKESKKLAALLADP------E 1411
                 F  PG    +V +TLP  R S +L +V + E+ +       A L  +       E
Sbjct: 1346 APSANFFDPGYLSEQVARTLPRNRPSGSLWKVTVPEEVYLGSETHFAELTNNTNVDGVYE 1405

Query: 1412 VEVLGWQQNAAKIGMQRCAASSQWFNERISLARYAHILWISDDGVPDLGG 1461
            +EVL   +   ++G     A S +    ++ AR        DDGV DL G
Sbjct: 1406 LEVLHVVRAILRLGNSCSPAGSSYLT--LNKAR--------DDGV-DLTG 1444



 Score =  293 bits (749), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 191/642 (29%), Positives = 337/642 (52%), Gaps = 38/642 (5%)

Query: 1363 PIVEKFPGRRVNKTLPHGRRSFNLIEVMIDEDQFRKESKKLAALLADPEVEVLGWQQNAA 1422
            P VE+FP   +  +L    RS + +E+    +  ++   +   L A P +  L  Q    
Sbjct: 1582 PKVERFPVVMMTSSL----RSTHSLELNWHVEVVKRMCTRY--LAAGPWLHSLVGQATYY 1635

Query: 1423 KIGMQRCAASSQWFNERISLARYA----HILWISDDGVPDLGGTSEEDECFADEVHQPVL 1478
             + +    +    F   +  AR       ILW S    PDLGG  E+D    +EV  P L
Sbjct: 1636 NVPIGNVESDRALFFADVDFARRLLKEDMILWWSSGSRPDLGGI-EDDVRTTEEVINPQL 1694

Query: 1479 TYPGAYRKVSVELKIHHLSVNALLKSNQVNEMEG-GGLFGFDQDMNSGPYNNELCGFDET 1537
              PG Y  V + +++ +L++N++L+S+ VNEMEG GG   FD  +++   N+ + G  ++
Sbjct: 1695 VVPGCYDNVCLSVQVRNLAINSVLQSSLVNEMEGAGGSTAFDSTLHT--LNDHMSGTAQS 1752

Query: 1538 TS-------SAPAFRVVKQLIQRCLTDAVTSGNVFADAILQHLYRWLCSPHSKLHDPVLH 1590
            ++       S   F V+K +++  L D     +  AD ++ H +RW+ S  +++HDP L 
Sbjct: 1753 STTLGDAAVSPLTFNVIKSMVRSWLLDKARDLDGPADLVISHFWRWMSSIAAQMHDPGLM 1812

Query: 1591 RILHKVMQKVFAMLLAEFRKLGATIIFANFSKVIIDTGKFDLSAAKAYCDSLLKALQTRE 1650
            R +H +M K F  +LAEF++LG+ ++ A+F  +++ T K     A AY   L  A+ + E
Sbjct: 1813 RFVHGLMHKTFMQMLAEFKRLGSNVVAADFGSILLVTSK-PPGTAYAYGTYLKGAVTSHE 1871

Query: 1651 LFEWIELEPVHFWHSLLFMDQYNYGGIPARADESLDDDSQ-VDIVSSWNIAEYLPKEIQD 1709
            LF+ + LE   ++  L++MD  N   +  +  + ++   + + +  +WNI  +LP  +Q 
Sbjct: 1872 LFKHMYLEIDRYYDYLVYMDNANQAAVVCQNPQEVEPPKKSLAVTMAWNIENFLPPAVQR 1931

Query: 1710 HFVLVVSEFMYIPWKHAQKLA-ASRASLQEGSSCTPSITVAAAENFESHI-VQYVKGEIS 1767
             F   V+ FM   ++  ++ A +SR  LQ   + T +   A  ++   +  ++ V+  I+
Sbjct: 1932 IFHESVNFFMISMYRIKREHAESSRLPLQLLRNLTLTQDAAGPKDSSRNKEMEAVRSFIA 1991

Query: 1768 SYFTGKLLSIVRDAIHHMKKMNNDQHNSPGVMQ----TAANIHKVDAPLEFIKHVCAAFA 1823
            +  T K+L  V + +   K+    Q  +PG         +++   +  LEF+K VCA FA
Sbjct: 1992 TRLTRKMLRSVSNILEEHKEALM-QSAAPGEFAFPVLPGSHLTLHNPALEFVKAVCAVFA 2050

Query: 1824 LDQNVQHDVLVMRKNLLKYVRVREFAPEAEFRDPCPSFILPNVICSYCNDCRDLDLCRDM 1883
            L ++ + ++ ++++N+L  V VREFA EA FR+PC  F L  VIC  C D RD+D CRD+
Sbjct: 2051 LAKDFKTEIGILKRNMLDLVGVREFAEEAVFRNPCEPFTLTMVICPCCADMRDMDFCRDV 2110

Query: 1884 ALLA------QDWHCAMPQCGQPYDREVMENALLQIVRQRERLYHLQDLVCIRCNQVKAA 1937
             LL         W CA  QCG  +D++ ++ AL+ I+ + E  +  QDL C +C QV++ 
Sbjct: 2111 DLLPSAPGARSAWQCA--QCGYDFDKQEIDFALVSIIERLEASFTTQDLRCSKCKQVRSD 2168

Query: 1938 HLAEQCACAGSFRCKEDASDFRSKMQIFLNIANRQGFQLLQE 1979
            ++++ C C+G +R     ++FR +++  +N+A      LL++
Sbjct: 2169 NVSKHCICSGEWRYILSKAEFRRRLRTAVNVATVHNLPLLRD 2210


>gi|344303851|gb|EGW34100.1| DNA-directed DNA polymerase epsilon, catalytic subunit A [Spathaspora
            passalidarum NRRL Y-27907]
          Length = 2208

 Score = 1289 bits (3336), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 670/1417 (47%), Positives = 923/1417 (65%), Gaps = 90/1417 (6%)

Query: 25   EELEAKLGYDLFSEGDK-----RLGWLLTFASSSLEDEDTRKVYSCIDLYFVSQDGSTFK 79
            ++L++ +G+D F  G+      R GWL+   ++++  +     YS +D YF+ ++G +FK
Sbjct: 58   DKLDSIMGFDRFEHGEHDGAKPRKGWLVNMHATTIPSDQYLTGYSGVDYYFLDEEGGSFK 117

Query: 80   SKYKFRPYFYAATKEKMEMDVEAYLRRRYES-QIADIEILEKEDLDLKNHLSGLHKSYLK 138
            +  ++ PYF+       E +VE + ++  ES  +  +  + KEDL L NHL GL K+ +K
Sbjct: 118  ATLQYDPYFFVEVLPGHESEVEEWAKKFLESCNVKSLTRVSKEDLALPNHLLGLKKNLIK 177

Query: 139  ISFDTVQQLMDVKKDLLHVVERNQAKFDAAEAYE--SILTGKREQR------PQDFLDCI 190
            ++F  V  L+  ++ L  +++ NQ K D+ E Y+  +   G   +       P  FLD  
Sbjct: 178  LTFHNVSDLLGARRLLSPIIKENQMKRDSREIYKVMNFSNGHTNEESTNTTDPSTFLD-- 235

Query: 191  VDLREYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLLEKRVDLLQRAEVHVCAFDIETTK 250
             D++EYDVPYH+R +ID  +R G+WYDV    +   L +  + +  A+  V AFDIETTK
Sbjct: 236  -DIKEYDVPYHVRVSIDKQIRVGKWYDVFAKHSKVHLVEDKEKIAFADPVVLAFDIETTK 294

Query: 251  LPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNVNNE 310
             PLKFPDA  D IMMISYM+DG+G+LI NRE + EDIED EYTPKPE+ G F + N  +E
Sbjct: 295  APLKFPDAKIDQIMMISYMIDGEGFLITNREIISEDIEDFEYTPKPEYPGLFTIFNEPDE 354

Query: 311  IELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDKNQGECRA 370
              +L  ++ H+++ KP +  T+NGD+FDWPF+ETR+  H   M +E+GF  D N+GE ++
Sbjct: 355  KHVLLRFYEHIRDAKPTVIATFNGDFFDWPFVETRSRFHDLDMFDEIGFAKD-NEGEYKS 413

Query: 371  KFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQMMASYS 430
            K+  H+DCF WVKRDSYLPQGSQGLKAVT  KLGY+P E++PE M  +A EKPQ+++ YS
Sbjct: 414  KYCVHMDCFRWVKRDSYLPQGSQGLKAVTTVKLGYNPTELDPELMTPYAYEKPQLLSEYS 473

Query: 431  VSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVICPNK 490
            VSDAVATYYLY  YVHPFIFSL TIIP++PDEVLRKG+GTLCEMLL VQAY+ N++ PNK
Sbjct: 474  VSDAVATYYLYYKYVHPFIFSLCTIIPLNPDEVLRKGTGTLCEMLLSVQAYENNILLPNK 533

Query: 491  HQSDPEKFYRNHLLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQLLNNLDRDLQY 550
            H    E+FY  HLLESETY+GGHVE LE+GVFRSD+ T FK+D +A ++LL +L   +++
Sbjct: 534  HSDPIERFYDGHLLESETYVGGHVESLEAGVFRSDIATDFKIDTAAIDELLRDLHNSIKF 593

Query: 551  AIKVEGKMDLESVSNYDEVKNAIMEKLLRLQEEPIREECPLIYHLDVAAMYPNIILTNRL 610
             ++VE    LE V N+D+V   I  KLL L+  P R+E PLIYH+DVA+MYPNI+ +NRL
Sbjct: 594  CVEVENGKKLEDVENFDQVYKEIESKLLELKSNPSRKETPLIYHVDVASMYPNIMTSNRL 653

Query: 611  QPPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYYHLKKQIESEFVDGTNG 670
            QP S+ ++E C ACDFNRPGK C R+L W WRGE F  + ++Y  +K+ ++SE    +  
Sbjct: 654  QPDSMKSEEDCAACDFNRPGKNCDRRLPWSWRGEYFPAEMNEYNMIKRTLQSETFPNSRS 713

Query: 671  HL-SKSFLDLPKMEQQSRLKDRLKKYCQKAYKRVLDKPVTELREAGICMRENSFYVDTVR 729
             L  ++F +L   EQ S +K R+  Y +K Y RV    V   REA IC REN FYVDTVR
Sbjct: 714  WLPPRTFDELSYTEQASLIKKRISDYSRKVYHRVKQSKVV-TREAIICQRENPFYVDTVR 772

Query: 730  SFRDRRYEYKGLNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHKCILNSFYGYV 789
            SFRDRRYE+KGL KVWKGK S+   +       EA+ MVVLYDSLQLAHK ILNSFYGYV
Sbjct: 773  SFRDRRYEFKGLAKVWKGKASKLDGADKD----EAKKMVVLYDSLQLAHKVILNSFYGYV 828

Query: 790  MRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLPGSFPENFTFK 849
            MRKG+RWYSMEMAGV   TGA IIQ AR L+E+IG+PLELDTDGIWC+LP SFPENF  K
Sbjct: 829  MRKGSRWYSMEMAGVTCLTGATIIQMARALVERIGRPLELDTDGIWCILPKSFPENFNLK 888

Query: 850  TKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEFEVDGPYKAM 909
             KD  KK+ + YPC MLN  V +  TNDQYQ LVDP +  Y T S+ SI FEVDGPYKAM
Sbjct: 889  CKD-GKKIFLEYPCSMLNYLVHQRFTNDQYQDLVDPETFKYSTRSDNSIFFEVDGPYKAM 947

Query: 910  ILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFLHGSTIE 969
            ILP SKEEG  +KKRYAVFN DG+LAELKGFE+KRRGEL+LIK FQ+++F  FL G+T+E
Sbjct: 948  ILPTSKEEGKGLKKRYAVFNHDGSLAELKGFELKRRGELQLIKNFQSDIFKLFLEGNTLE 1007

Query: 970  ECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLADYGEQKSCAVTTARRL 1029
             CY AV+ VAN WLD+LD +G  + D +LI+ I E+ +MSKSLA+YG+QKS ++TTA+RL
Sbjct: 1008 SCYQAVSTVANNWLDVLDTKGGMLEDEDLIELICENRSMSKSLAEYGDQKSTSITTAKRL 1067

Query: 1030 SDFLGDTMVKDKGLRCQYIVACEPQGTPVSERAVPVAIFETDAEIMKFYLRKWCK--TSS 1087
             +FLG+ MVKD GL  +YI++ +P G PV+ERA+PV+IF +D + +  +L+KW K  + S
Sbjct: 1068 GEFLGEEMVKDAGLATKYIISAKPIGAPVTERAIPVSIFSSDKKAI--FLKKWLKDPSLS 1125

Query: 1088 DVGIRSIVDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLYKKVREKEDKFRQ 1147
            +   R ++DW YY++RL+S IQKIITIPAA+Q V NPVPRV HPDWL +KV  +ED  +Q
Sbjct: 1126 NFSPRDVIDWDYYRERLASVIQKIITIPAALQNVKNPVPRVQHPDWLKRKVTIREDSKQQ 1185

Query: 1148 RKLVDIFSSLKKDDFLNKTCNAETNLMDENVEDLEDFPKKRRNSVNGPRPIVRCFEVNNE 1207
              +   F             ++++ +M++ V+D+EDF +                + + +
Sbjct: 1186 SSIATFFGK-----------SSKSEIMEKQVKDIEDFGEA---------------DYSMK 1219

Query: 1208 QKTVKTTDQVDSLRQQLEPSEVSDQQPSSQN--AIDTENIDRIVDYKGWLELKKRKW--- 1262
             K  K T +    R+    + V+D +   +N   ++        DY+G+L  +K KW   
Sbjct: 1220 SKVGKVTSKK---RRAGRANLVADTEEEERNLAILNGPCPSMTEDYQGFLAYQKAKWTMQ 1276

Query: 1263 KDNLDRRKKQKLGSLRASHQANGVSESLGDMINHKEAQRRTGVGSYFRRQETAMTRCHWQ 1322
            + N +RR+K   GS                   + E+ +R+ VGS  R+Q   +   +W+
Sbjct: 1277 ESNRERRRKL-FGS-------------------NAESSQRSTVGSMIRKQAENVAGSNWE 1316

Query: 1323 IIQLVPS-SQSGVFLAWVVVEGIMVRIPITVPRLFYLNSKDPIVEK---FPG---RRVNK 1375
            I+Q     ++ G    +V     +      +P+  Y + K  + E+     G    + N 
Sbjct: 1317 ILQYKEDPTKPGNLKVYVSAGNKLHSFTFCIPKKVYASFKTELSERRLNVAGCDVEKSNA 1376

Query: 1376 TLPHGRRSFNLIEVMIDEDQFRKESKKLAALLADPEV 1412
             LP+G  + NL +  + +  ++++   + ++L D  +
Sbjct: 1377 ILPNGHDATNLYKFTMPQSTYQEQMTDVDSVLQDTNI 1413



 Score =  256 bits (653), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 174/643 (27%), Positives = 304/643 (47%), Gaps = 66/643 (10%)

Query: 1378 PHGRRSFNLIEVMIDEDQFRKESKKLAALLADPEVEVLGWQQNAAKIGMQRCAASSQWFN 1437
            P+  R  N++   +D    R    +LA       +  LGWQ   +K  +      + W  
Sbjct: 1583 PYASRLLNVLTSTVDFPTIRMNISELA-------LPALGWQALISKRVINHYFVLASWVK 1635

Query: 1438 ERISLARYAHI----------------------------LWISDDGVPDLGGTSEEDECF 1469
              ISL++Y  +                            LW S   + D GG   +    
Sbjct: 1636 NLISLSKYGGVPLCNLQIENVGYLIDIAYARRLVQGNIVLWWSSKPLADHGGFEFDKVTD 1695

Query: 1470 ADEVHQPVLTYPGAYRKVSVELKIHHLSVNALLKSNQVNEMEGGGLFGFDQDMNSGPYNN 1529
             + +  P +  P  Y    +E++I  L +N +L S+ +NE EG  L     D      NN
Sbjct: 1696 YENLEFPTINNPEIYETACLEVEIGTLEINTILTSSLINEAEGTDL---ADDAVRFDNNN 1752

Query: 1530 ELCGFDETTSSAPAFRVVKQLIQRCLTDAVTSGNVFADAILQHLYRWLCSPHSKLHDPVL 1589
                F E + SAPA  +++ +++    DA+ + N+ AD+++ +L  W+    S L+D  L
Sbjct: 1753 GASSFAEDSFSAPALAILRSMVKDWWDDALKN-NINADSMMNNLVTWVQRKDSFLYDYDL 1811

Query: 1590 HRILHKVMQKVFAMLLAEFRKLGATIIFANFSKVIIDTGKFDLSAAKAYCDSLLKALQTR 1649
               +H +  K    L+ EF+++ A +IFAN +K++I T K  +  + AY   +LKA +++
Sbjct: 1812 RYHVHNLTSKALLQLIGEFKRMNAHVIFANRNKMLIQTSKVSVENSYAYGQYILKAARSK 1871

Query: 1650 ELFEWIELEPVHFWHSLLFMDQYNYGGIPARADESLDDDSQVDIV--SSWNIAEYLPKEI 1707
             LF +++L+ V +W  L++MD++NYGG   R    + ++   ++V  + W + +YLP   
Sbjct: 1872 PLFNFLDLKIVKYWDLLIWMDEFNYGG---RCCTEITNEEMQNLVPENQWQLKKYLPVIF 1928

Query: 1708 QDHFVLVVSEFMYIPWKHAQKLAASRASLQEGSSCTPSITVAAAE-NFESHIVQYVKGEI 1766
            Q+ F   +  F+    KH  +      +       T  + +   + N E+      K   
Sbjct: 1929 QNEFEDWLVIFLDALSKHKIETLTGGGTQTGTPRVTQIMHILKGQKNLEA------KETE 1982

Query: 1767 SSYFTGKLLSIVRDAIH-HMKKMNNDQHNS---PGVMQ-------TAANIHKVDAPLEFI 1815
                T  ++ + R  +   M+K+   Q+ +   P   +         +++H  +  LE +
Sbjct: 1983 EEDITNGVIELFRRPLEKRMEKLYRRQNEAILNPEFKKEYEFPKLVGSHLHLRNPALELV 2042

Query: 1816 KHVCAAFALDQNVQHDVLVMRKNLLKYVRVREFAPEAEFRDPCPSFILPNVICSYCNDCR 1875
            K +CA FAL Q    +V ++RK LL+   ++EF+ EA FR+P  S  LP+VIC YCN  R
Sbjct: 2043 KFLCAIFALSQKRNIEVRLLRKELLQLFDIKEFSKEASFRNPSASLKLPHVICDYCNYVR 2102

Query: 1876 DLDLCRDMALLAQDWHCAMPQCGQPYDREVMENALLQIVRQRERLYHLQDLVCIRCNQVK 1935
            D+DLCR+  +    WHC   QC +PY++  +E  ++    +    ++ QDL C +CNQ++
Sbjct: 2103 DIDLCREEEI--NIWHCV--QCHKPYNKIAIEEEIIAQFNKTLTKFYNQDLKCSKCNQIR 2158

Query: 1936 AAHLAEQCACAGSFRCKEDASDFRSKMQIFLNIANRQGFQLLQ 1978
            A +L   C C+G++       D   K+ +F N+A+    QLL+
Sbjct: 2159 AGNLDLFCKCSGNWTETVSHHDVEKKLMVFENVASVFNLQLLK 2201


>gi|403176859|ref|XP_003335473.2| DNA polymerase epsilon subunit 1 [Puccinia graminis f. sp. tritici
            CRL 75-36-700-3]
 gi|375172430|gb|EFP91054.2| DNA polymerase epsilon subunit 1 [Puccinia graminis f. sp. tritici
            CRL 75-36-700-3]
          Length = 2267

 Score = 1289 bits (3335), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 630/1191 (52%), Positives = 837/1191 (70%), Gaps = 66/1191 (5%)

Query: 24   EEELEAKLGYDLFSEGDKRLGWLLTFASSSLED---------EDTRKVYSCIDLYFVSQD 74
            + E++  LG+  F +G  R+GWL+    + +++         E   +  + +DLYF+  D
Sbjct: 69   DREIDESLGFVRFDQGQPRVGWLINIQPTLVQEALGPQTDKAEGPSQPSAAVDLYFLQDD 128

Query: 75   GSTFKSKYKFRPYFYAATKEKMEMDVEAYLRRRYESQIADIEILEKEDLDLKNHLSGLHK 134
            GS F+S   + PYF  A++   E +VE ++R++Y+ Q+  +E + KEDL L NHL+G  +
Sbjct: 129  GSMFRSTLIYHPYFLIASRVGKEAEVEEWIRKKYDGQVMKVEGVIKEDLKLPNHLAGHKR 188

Query: 135  SYLKISFDTVQQLMDVKKDLLHVVERNQAKFDAAEAYESILTGKREQ------------- 181
             +LK+ F  V QL+ V++DLL V   N AK DA ++Y  ++   R +             
Sbjct: 189  RFLKLVFRNVDQLLRVRRDLLAVALSNNAKMDALDSYAEVVKAGRGEFDGMDIEDFDSLD 248

Query: 182  --RPQDFL----------------------------DCIVDLREYDVPYHIRFAIDNDVR 211
                QD L                            + IVD+REYD+PY++R AID ++R
Sbjct: 249  FNGVQDTLGGTASRKGKLRSLVSKSNSLQPAATLPSEWIVDIREYDIPYYLRVAIDKNLR 308

Query: 212  CGQWYDVSISS---TGPLLEKRVDLLQRAEVHVCAFDIETTKLPLKFPDADYDIIMMISY 268
             G WY V+I     T  ++ +RV   +RAE  V A+DIETTK PLKFPD+  D IMMISY
Sbjct: 309  VGLWYTVAIEQNNVTCTIIPERV---ERAEPVVMAYDIETTKAPLKFPDSANDQIMMISY 365

Query: 269  MLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNVNNEIELLRLWFAHMQEVKPGI 328
            M+DGQG+LI NRE V +DI D +Y+PKPE+EG F + N  NE+ L+R WF H+++ +P +
Sbjct: 366  MIDGQGFLITNREIVADDIADFDYSPKPEYEGQFTIFNEENELALIRRWFDHIRDARPTV 425

Query: 329  YVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDKNQGECRAKFACHLDCFAWVKRDSYL 388
              TYNGD FD+PF+  RAA HG  M +E+GF  D ++ E R++   H+DCF WVKRDSYL
Sbjct: 426  MATYNGDSFDFPFVYARAAIHGLDMFKEIGFNPD-SESEFRSRTCIHMDCFKWVKRDSYL 484

Query: 389  PQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQMMASYSVSDAVATYYLYMTYVHPF 448
            PQGSQGLKAVT AKLGY+P+E++PE M  +A E+PQ++A YSVSDAVATYYLYM YVHPF
Sbjct: 485  PQGSQGLKAVTVAKLGYNPIELDPELMTPYAVEQPQILAQYSVSDAVATYYLYMKYVHPF 544

Query: 449  IFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVICPNKHQSDPEKFYRNHLLESET 508
            IFSL  IIP++PDEVLRKGSGTLCE LLMV+A+ +++I PN+H       Y  HLLESET
Sbjct: 545  IFSLCNIIPLNPDEVLRKGSGTLCETLLMVEAFNSSIIMPNRHTDPHGTMYNGHLLESET 604

Query: 509  YIGGHVECLESGVFRSDLPTSFKLDPSAYEQLLNNLDRDLQYAIKVEGKMDLESVSNYDE 568
            Y+GGHVE LE+GVFRSD+ + FKL PS  +QL++ LD  L+++I  EG+  LE V NYD+
Sbjct: 605  YVGGHVEALEAGVFRSDILSDFKLVPSRCQQLIDELDSALKFSIVEEGQYALEDVVNYDD 664

Query: 569  VKNAIMEKLLRLQEEPIREECPLIYHLDVAAMYPNIILTNRLQPPSIVTDEVCTACDFNR 628
            V+ AI E L  +++EP R+E PLIYHLDVAAMYPNI+L+NRLQP S+V++ +C ACD+NR
Sbjct: 665  VRAAIQEALETMRDEPDRQEFPLIYHLDVAAMYPNIMLSNRLQPDSVVSEGMCAACDYNR 724

Query: 629  PGKTCLRKLEWVWRGEIFMGKRSDYYHLKKQIESE-FVDGTNGHLSKSFLDLPKMEQQSR 687
            P KTC R+++W WRGE F  K  +Y  ++  IESE F     G   + F DL   EQ + 
Sbjct: 725  PNKTCDRRMQWAWRGEYFPAKLDEYKMIRNAIESEVFPSKKPGQPPRKFGDLAPAEQTTL 784

Query: 688  LKDRLKKYCQKAYKRVLDKPVTELREAGICMRENSFYVDTVRSFRDRRYEYKGLNKVWKG 747
            L  RL  Y +K Y++  +  + E + A IC REN FY+DTVR+FRDRRY YKGL+K WK 
Sbjct: 785  LHKRLGDYSRKVYRKTHETTIEE-KTAIICQRENPFYIDTVRAFRDRRYTYKGLHKTWKK 843

Query: 748  KLSEAKASGNSI-KIQEAQDMVVLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVT 806
            K  +A+  G S+ +I EA+ M+V+YDSLQLAHKCILNSFYGYVMRKGARW+SMEMAG+  
Sbjct: 844  KADQAQQEGRSVGEIAEAKKMIVIYDSLQLAHKCILNSFYGYVMRKGARWHSMEMAGITC 903

Query: 807  YTGAKIIQNARLLIEKIGKPLELDTDGIWCVLPGSFPENFTFKTKDLKKKLTISYPCVML 866
             TGA+IIQ AR +IE++G+PLELDTDGIWC+LP  FP+NFTFK  +  K   ISYPC +L
Sbjct: 904  LTGARIIQAAREIIEEVGRPLELDTDGIWCMLPKIFPDNFTFKLTN-GKTHAISYPCSIL 962

Query: 867  NVDVARNNTNDQYQTLVDPVSKTYETHSECSIEFEVDGPYKAMILPASKEEGILIKKRYA 926
            N  V +  TND Y    +P +KTY+  +E SI FE+DGPY+AMILP+SKEE  L+KKRYA
Sbjct: 963  NHLVHQRFTNDAYHQW-NPETKTYDVRNENSIFFELDGPYRAMILPSSKEEDKLLKKRYA 1021

Query: 927  VFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFLHGSTIEECYSAVAAVANRWLDLL 986
            VFN DG+LAELKGFE+KRRGEL+LIK+FQ  +F+KFL G  ++ CY AVA VANRWLD+L
Sbjct: 1022 VFNPDGSLAELKGFEVKRRGELQLIKIFQTSIFEKFLVGDDLKACYDAVAQVANRWLDVL 1081

Query: 987  DNQGKDIADSELIDYISESSTMSKSLADYGEQKSCAVTTARRLSDFLGDTMVKDKGLRCQ 1046
              +   + D ELID ISE+ +MSK+LA+YG QKS ++ TA+RLS+FLG+ MVKDKGL C+
Sbjct: 1082 ATKAISMHDEELIDLISENRSMSKTLAEYGAQKSTSIRTAKRLSEFLGNQMVKDKGLSCR 1141

Query: 1047 YIVACEPQGTPVSERAVPVAIFETDAEIMKFYLRKWCKTSS--DVGIRSIVDWSYYKQRL 1104
            +I++ +P G+PV++RAVPVAIF  +  + K +LRKW K +S  D+ +RSI+DW YY +RL
Sbjct: 1142 FIISAKPHGSPVTDRAVPVAIFSAEPSVQKHFLRKWLKDNSLVDLSLRSILDWGYYTERL 1201

Query: 1105 SSAIQKIITIPAAMQKVSNPVPRVVHPDWLYKKVREKEDKFRQRKLVDIFS 1155
             S IQK+ITIPAAMQKV NPVPR+ HPDWL +++  +ED F+Q K+ D+F+
Sbjct: 1202 GSVIQKLITIPAAMQKVLNPVPRIHHPDWLARRLATREDTFKQHKIDDMFA 1252



 Score =  276 bits (705), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 189/646 (29%), Positives = 311/646 (48%), Gaps = 93/646 (14%)

Query: 1408 ADPEVEVLGWQQNAAKIGMQRCAASSQWFNERIS-------------------------- 1441
            AD + E  GWQ+ AA+  +Q    +S +  ER++                          
Sbjct: 1641 ADNKFEAFGWQRFAAERMVQHYVRASSFLRERVAQAEQFDVPVANFEMDAPRSLMDLEFA 1700

Query: 1442 --LARYAHILWISDDGVPDLGGTSEE--DECFADEVHQPVLTYPGAYRKVSVELKIHHLS 1497
              L +  H++W S    PDLGG   +   E   D +  P ++  GAY   SVEL I HL+
Sbjct: 1701 RRLTKADHLIWWSASRKPDLGGKEADLNTELVMDVLSNPEISVMGAYSDASVELTIQHLA 1760

Query: 1498 VNALLKSNQVNEMEGG--GLFGFDQ------DMNSGPYNNELCGFDETTSSAPAFRVVKQ 1549
            +N++L+S+ V E+ GG  G  GF        D + G   + L G  ++      F + + 
Sbjct: 1761 MNSVLQSSWVYEISGGTGGSLGFQDASHNLDDYSKGSVASSLLG--DSDLPVQTFTLFRT 1818

Query: 1550 LIQRCLTDAVTSGNVFA-DAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEF 1608
            +++  + ++  +G       +++H +RWL S  S + DP L+R +H +M+KVF+ LLAEF
Sbjct: 1819 MVRAWIAESARAGTGHHYVGLIKHFWRWLSSSSSSMFDPALYRFVHGLMKKVFSQLLAEF 1878

Query: 1609 RKLGATIIFANFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLF 1668
            R+LG  II+A+F ++ + T K + ++A AY   ++ A+  R+LF+++EL+ V FW  LL+
Sbjct: 1879 RRLGTRIIYADFGRIFLLTSKPNSASALAYASYIVTAINGRDLFKFLELDIVRFWEQLLW 1938

Query: 1669 MDQYNYGGIPARADESLDDDSQV--DIVSSWNIAEYLPKEIQDHFVLVVSEFMY-IPWKH 1725
            +D  N+ GI    D     DS+V  +I  +WN+  +LP  +Q  F+ VV  ++Y +   H
Sbjct: 1939 VDATNFAGITC-GDPLKASDSEVVENIDMNWNMVNFLPPALQQDFLHVVCLYVYDLHQCH 1997

Query: 1726 AQKLAASRASLQEGSSCTPSITVAAAENFESHIVQYVKGEISSYFTGKLLSIVRDAIHHM 1785
             Q  +  +  L+              +  E+   Q ++  ++S  T + L IV   I   
Sbjct: 1998 GQASSNDQIQLE-----------VDRKQIEA---QLLRSLVNSKITRQTLKIVNQIIERQ 2043

Query: 1786 KKMNNDQH--------NSPGVMQTAANIHKVDAPLEFIKHVCAAFALDQNVQHDVLVMRK 1837
             K   D            PG     ++I      LEF+K VC    L   V  +V +M++
Sbjct: 2044 NKAAADDELRTTFDFPRLPG-----SHIAMKKPVLEFVKMVCFVMELATLVTAEVRIMKR 2098

Query: 1838 NLLKYVRVREFAPEAEFRDPCPSFILPNVICSYCNDCRDLDLCRDMALLAQ--------- 1888
             LL  + VREF+ EA F++PC  F +P+ IC +C+  R  DL RD  LLA          
Sbjct: 2099 VLLDLIGVREFSNEAVFKNPCIPFKIPDTICRHCSAVRSFDLSRDSDLLASASTRRVGQP 2158

Query: 1889 -DWHCAMPQCGQPYDREVMENALLQIVRQRERLYHLQDLVCIRCNQVKAAHLAEQCACAG 1947
             +W C    CGQ YDR  +E  L++ + ++   + LQDL C RC Q+K   ++ +C C+G
Sbjct: 2159 PEWLCG--HCGQSYDRLGIEAMLIEQLHKQVASFQLQDLRCSRCAQLKEDTMSLRCPCSG 2216

Query: 1948 SFRCKEDA---------SDFRSKMQIFLNIANRQGFQLLQECTSWI 1984
             +    DA         +    ++ +  ++A      +L E   W+
Sbjct: 2217 EYILAGDAGSQADRPSSAHLERRLAVARSVAEAHQLDVLLEFVQWL 2262



 Score = 55.5 bits (132), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 42/171 (24%), Positives = 75/171 (43%), Gaps = 27/171 (15%)

Query: 1249 VDYKGWLELKKRKWKDNLDRRKKQKLGSLRASHQANGVSESLGDMINHKEAQRRTGVGSY 1308
            +DY GW+   K  W+     +K        A+  +  V  S+  M+             +
Sbjct: 1294 IDYSGWIAAMKPIWRAQRTAKK--------ATSGSKFVPGSIASML-------------H 1332

Query: 1309 FRRQETAMTRCHWQIIQLVPSS-QSGVFLAWVVVEGIMVRIPITVPRLFYLNSK-DPIVE 1366
             +  +      H +++QL P+  + G F AWV+   ++    ITV R FY+N K +P  +
Sbjct: 1333 VQNLKVVSHSSHLELVQLSPNPLKPGEFQAWVLFNDVLQPARITVLREFYVNLKHEPGPD 1392

Query: 1367 KFP----GRRVNKTLPHGRRSFNLIEVMIDEDQFRKESKKLAALLADPEVE 1413
             FP       + KTLP  +   NL ++ + E  + +++     ++  PEVE
Sbjct: 1393 FFPESCMAEPIVKTLPRSQARINLFKISVTEKSYIEDASYYQKMVTSPEVE 1443


>gi|448115826|ref|XP_004202915.1| Piso0_001783 [Millerozyma farinosa CBS 7064]
 gi|359383783|emb|CCE79699.1| Piso0_001783 [Millerozyma farinosa CBS 7064]
          Length = 2219

 Score = 1287 bits (3331), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 669/1432 (46%), Positives = 926/1432 (64%), Gaps = 93/1432 (6%)

Query: 14   TKKQKLIRSAEEELEAKLGYDL--FSEGDKR--LGWLLTFASSSLEDEDTRKVYSCIDLY 69
            T K+ L+   +  +++ +G+D   ++E + R   GWL+   ++++  ++    Y+ +D Y
Sbjct: 49   TSKRDLVEKVDR-IDSIMGFDRIEYNESNTRPKKGWLINMHTTTVISDEYIPGYAGVDYY 107

Query: 70   FVSQDGSTFKSKYKFRPYFYAATKEKMEMDVEAYLRRRYES-QIADIEILEKEDLDLKNH 128
            F+ ++G +FK   ++ PYF+       E +V+  LR+  E   +  I  L KEDL L NH
Sbjct: 108  FLDEEGGSFKVTKRYDPYFHLVVIPGRESEVDEMLRKMLEGCGLKSIVKLFKEDLSLPNH 167

Query: 129  LSGLHKSYLKISFDTVQQLMDVKKDLLHVVERNQAKFDAAEAYESI-------LTGKREQ 181
            L GL ++ L+++F  +  L++ +K L+ +V+ N+ K D    Y+ +       L G  + 
Sbjct: 168  LVGLKRTLLQLNFHNISDLLNARKLLMPLVQDNRMKRDTRNIYQVMNFNNVNNLKGDNDS 227

Query: 182  --------RPQDFLDCIVDLREYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLLEKRVDL 233
                     P D    I D+REYDVPYH+R +IDND+R G+WY+V++ +   ++E+    
Sbjct: 228  SYFNEYNSEPTDPATLIDDIREYDVPYHVRVSIDNDIRIGKWYNVTVKAHDVIMEEDTGT 287

Query: 234  LQRAEVHVCAFDIETTKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYT 293
            +  A+  + AFDIETTK PLKFPD+  D IMMISYM+DG+GYLI NRE + EDIED EYT
Sbjct: 288  IAFADPIILAFDIETTKAPLKFPDSKVDQIMMISYMIDGEGYLITNREIISEDIEDFEYT 347

Query: 294  PKPEFEGYFKVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKM 353
            PKPE+ G F + N  +E  +L  +F H++E +P +  T+NGD+FDWPF++ R+  H   +
Sbjct: 348  PKPEYPGPFTIFNEPDEKGVLDRFFEHIRETRPTVIATFNGDFFDWPFVDDRSRFHDMDL 407

Query: 354  SEELGFQCDKNQGECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPE 413
             EE+GF  D ++GE ++ +  H+DCF WVKRDSYLPQGSQGLKAVT AKLGY+P E++PE
Sbjct: 408  FEEIGFAKD-SEGEYKSNYCAHMDCFRWVKRDSYLPQGSQGLKAVTTAKLGYNPTELDPE 466

Query: 414  DMVRFAKEKPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCE 473
             M  +A EKPQ+++ YSVSDAVATYYLY  YVHPFIFSL TIIP++PDEVLRKG+GTLCE
Sbjct: 467  LMTPYAYEKPQLLSEYSVSDAVATYYLYFKYVHPFIFSLCTIIPLNPDEVLRKGTGTLCE 526

Query: 474  MLLMVQAYKANVICPNKHQSDPEKFYRNHLLESETYIGGHVECLESGVFRSDLPTSFKLD 533
            MLLMVQAYK N+I PNKH    E+FY  HLLESETY+GGHVE LE+GVFRSDLP  F +D
Sbjct: 527  MLLMVQAYKGNIILPNKHSDPIERFYEGHLLESETYVGGHVESLEAGVFRSDLPNDFSID 586

Query: 534  PSAYEQLLNNLDRDLQYAIKVEGKMDLESVSNYDEVKNAIMEKLLRLQEEPIREECPLIY 593
             SA ++LL++L   L++ I+VE K  LE V N++E+ + I  KLL L+E P R E PLIY
Sbjct: 587  HSAIDELLSDLPNALKFCIEVENKKKLEDVENFEEIHDEIKSKLLELKENPKRSETPLIY 646

Query: 594  HLDVAAMYPNIILTNRLQPPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEIFMGKRSDY 653
            H+DVA+MYPNI+ +NRLQP S+ ++E C ACDFNRPGKTC R+L W WRGE    + ++Y
Sbjct: 647  HVDVASMYPNIMTSNRLQPDSMKSEEDCAACDFNRPGKTCDRRLPWSWRGEFVPAQMNEY 706

Query: 654  YHLKKQIESEFVDGTNGHL-SKSFLDLPKMEQQSRLKDRLKKYCQKAYKRVLDKPVTELR 712
              +K+ +++E   G+   L  ++F +LP  EQ   +K RL +Y +K Y RV  +  T  R
Sbjct: 707  GMIKRSLQNETFPGSKPWLPERTFDELPYSEQAQLIKKRLNEYSKKVYHRV-KQSKTVTR 765

Query: 713  EAGICMRENSFYVDTVRSFRDRRYEYKGLNKVWKGKLSEAKASGNSIKIQEAQDMVVLYD 772
            EA +C REN FYV+TVRSFRDRRY++K L KVWK K S    S ++I   EA+ MV+LYD
Sbjct: 766  EAIVCQRENPFYVNTVRSFRDRRYDFKTLAKVWKNKTSSVPKS-DTIARDEAKKMVILYD 824

Query: 773  SLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTD 832
            SLQLAHK ILNSFYGYVMRKG+RWYSMEMAG+   TGA IIQ AR L+E++G+PLELDTD
Sbjct: 825  SLQLAHKVILNSFYGYVMRKGSRWYSMEMAGITCLTGATIIQMARSLVERLGRPLELDTD 884

Query: 833  GIWCVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYET 892
            GIWC+LP SFPEN+ FKTKD  KKL + YPC MLN  V +  TN QYQ L DP S  Y T
Sbjct: 885  GIWCILPSSFPENYNFKTKD-GKKLFLEYPCSMLNYIVHQRFTNHQYQDLADPASFKYST 943

Query: 893  HSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIK 952
             SE SI FEVDGPYKAM+LP SKEE   +KKRYAVFN DG+LAELKGFE+KRRGEL+L+K
Sbjct: 944  RSENSIFFEVDGPYKAMVLPTSKEEDKGLKKRYAVFNHDGSLAELKGFELKRRGELQLVK 1003

Query: 953  VFQAELFDKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSL 1012
             FQ+++F  FL G T+EECY +V+ VAN WLD+LD +G  + D +LI+ I E+ +MSKSL
Sbjct: 1004 NFQSDIFKLFLQGKTLEECYKSVSIVANNWLDVLDTKGGMLEDEDLIELICENKSMSKSL 1063

Query: 1013 ADYGEQKSCAVTTARRLSDFLGDTMVKDKGLRCQYIVACEPQGTPVSERAVPVAIFETDA 1072
             +YG QKS ++TTA+RL +FLG+ MVKD GL C+YI++ +P G+PV++RA+PV+IF +D 
Sbjct: 1064 EEYGNQKSTSITTAKRLGEFLGEEMVKDAGLVCKYIISEKPLGSPVTDRAIPVSIFSSDK 1123

Query: 1073 EIMKFYLRKWCKTSS--DVGIRSIVDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVH 1130
            +  +F+L+KW K  S  +   RS++DW YY  RL+S +QKII+IPAA+Q V NPVPRV H
Sbjct: 1124 K--EFFLKKWLKDPSLDNFDPRSVIDWKYYYDRLASVVQKIISIPAALQGVKNPVPRVPH 1181

Query: 1131 PDWLYKKVREKEDKFRQRKLVDIFSSLKKDDFLNKTCNAETNLMDENVEDLEDFPK---- 1186
            PDWL +++  +ED  +Q  + + F              ++T  +   ++D+EDF +    
Sbjct: 1182 PDWLQRRINIREDSKQQSSIGNFFQK-----------GSKTEELKRQIQDIEDFGEVGFD 1230

Query: 1187 KRRNSVNGPRPIVRCFEVNNEQKTVKTTDQVDSLRQQLEPSEVSDQQPSSQNAIDTENID 1246
             RR+ V          +V + ++   T + V            S++   S   ++     
Sbjct: 1231 VRRSKVG---------KVTSRKRKANTANHVAE----------SEEDERSIAVLNGPCPS 1271

Query: 1247 RIVDYKGWLELKKRKWK---DNLDRRKKQKLGSLRASHQANGVSESLGDMINHKEAQRRT 1303
             +VDY G+L+ +K KW+     ++RRKK    ++  S+                    R+
Sbjct: 1272 PLVDYVGFLQYQKAKWRVQEKKMERRKKLFGENITTSY--------------------RS 1311

Query: 1304 GVGSYFRRQETAMTRCHWQIIQLVPSSQS-GVFLAWVVVEGIMVRIPITVPRLFYLNSKD 1362
             VG   R+Q   +    W+IIQ      S G    +V     +      +P+  + + K 
Sbjct: 1312 SVGDMMRKQAEKIAGSDWEIIQYKTDPASPGDVKVYVSAHNRIHTFTFHIPKQIFASFKM 1371

Query: 1363 PIVEKFPGR-----RVNKTLPHGRRSFNLIEVMIDEDQFRKESKKLAALLAD 1409
             +  K   R     R +  LP+G    +L ++ + E  + +E  K+  LL D
Sbjct: 1372 ELSPKKSIRDCEIERSSAVLPNGHDGTHLYKLTMPETVYAEEINKIEGLLND 1423



 Score =  253 bits (646), Expect = 9e-64,   Method: Compositional matrix adjust.
 Identities = 178/684 (26%), Positives = 322/684 (47%), Gaps = 81/684 (11%)

Query: 1352 VPRLFYLNSKDPIVEKFPGRRVNKTL-----PHGRRSFNLIEVMIDEDQFRKESKKLAAL 1406
            +P+L  L   D  + K    R NK +     P+  R   ++EV+    ++      ++ L
Sbjct: 1567 MPKL--LKKLDSAISKIDESRSNKAILAVQSPYTSR---ILEVLKSSSEYPVIRMNISEL 1621

Query: 1407 LADPEVEVLGWQQNAAKIGMQRCAASSQWFNERISLARYAHI------------------ 1448
                 +  +GWQ    +  +      + W  + ISL+RY+++                  
Sbjct: 1622 T----LPAIGWQSLIIRRAVNHYFVLATWLRKLISLSRYSNVPLCNLQIENMGYLIDMEY 1677

Query: 1449 ----------LWISDDGVPDLGGTSEEDECFADEVHQPVLTYPGAYRKVSVELKIHHLSV 1498
                      LW+S   +PD GG   + +     +  P +  P  Y    +E++I  L++
Sbjct: 1678 ARRLSENNIVLWLSSKPLPDHGGFENDRQSSFHSIDFPTINNPEIYETTCLEIEIGTLTI 1737

Query: 1499 NALLKSNQVNEMEGGGLFGFDQDMNSGPYNNELCGFDETTSSAPAFRVVKQLIQRCLTDA 1558
            N +L S+ +NEMEG  L     D+     NN      E + SAPA  +++ +++    DA
Sbjct: 1738 NTILTSSLINEMEGTDL---ADDVIEFDKNNGASTMAEDSFSAPALSILRAMVKDWWEDA 1794

Query: 1559 VTSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEFRKLGATIIFA 1618
            + + N  AD+++  L  W+    S L+D  LH  +  +  K    L+ EF+++ A ++FA
Sbjct: 1795 LRN-NENADSMMNSLVTWVQRSDSLLYDYALHYHVQNLTMKALLQLIGEFKRMNAHVVFA 1853

Query: 1619 NFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLFMDQYNYGGIP 1678
            N +K+I+ T K  +  + AY   L+ A +++ LF ++++    +W  L++MD+YNYGG  
Sbjct: 1854 NRNKLILQTSKVSVENSYAYGQYLVTATRSKPLFNFLDIRITRYWDLLIWMDEYNYGGRC 1913

Query: 1679 ARADESLDDDSQVDIVSSWNIAEYLPKEIQDHFVLVVSEFMYIPWKHAQKLAASRASLQE 1738
                 S +D   +  V+ W I ++LP   Q+ F   +  F+         L  ++     
Sbjct: 1914 CLEITS-NDVQNLFPVNQWQIKKFLPIIFQNEFEDWIIIFL-------DALVKNKNESLS 1965

Query: 1739 GSS--CTPSITVAAAENFESHIVQYVKGEIS----SYFTGKLLSIVRDA----IHHMKKM 1788
            G+S   TP IT  A      H+V+ ++ + +      +   ++ I R      I  + + 
Sbjct: 1966 GNSQIATPRITQVA------HLVKNLQNQAADDDQEDWANGVIEIFRKPLTRRIAKLYRK 2019

Query: 1789 NNDQHNSPGVMQTAA-------NIHKVDAPLEFIKHVCAAFALDQNVQHDVLVMRKNLLK 1841
             N+   +P +    A       + H  +  LE +K + A F+L ++   +V ++RK LL 
Sbjct: 2020 QNESILNPELKNEYAFPKLPGSHAHMKNPCLELVKFLVAVFSLSKSRTIEVSLLRKELLA 2079

Query: 1842 YVRVREFAPEAEFRDPCPSFILPNVICSYCNDCRDLDLCRDMALLAQDWHCAMPQCGQPY 1901
               V+EF+PE+ F +P  S  +P+VIC YCN  RD+D CRD  +    W+C   QC +PY
Sbjct: 2080 TFDVKEFSPESVFVNPSVSLTVPSVICDYCNYIRDIDFCRDEEI--NLWNCT--QCQKPY 2135

Query: 1902 DREVMENALLQIVRQRERLYHLQDLVCIRCNQVKAAHLAEQCACAGSFRCKEDASDFRSK 1961
            +R  +E  L+    +    ++LQD  C +C+Q+++ +++E C C+G +    D  D  +K
Sbjct: 2136 NRVSLEEQLVSEFYKMLTQFYLQDFKCSKCHQIRSDNMSEYCKCSGEWIESVDRRDMETK 2195

Query: 1962 MQIFLNIANRQGFQLLQECTSWIL 1985
            +  F+N A+     LL++    +L
Sbjct: 2196 LNTFVNTADYFKLHLLKDLIEEVL 2219


>gi|242061728|ref|XP_002452153.1| hypothetical protein SORBIDRAFT_04g020730 [Sorghum bicolor]
 gi|241931984|gb|EES05129.1| hypothetical protein SORBIDRAFT_04g020730 [Sorghum bicolor]
          Length = 2135

 Score = 1287 bits (3331), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 609/768 (79%), Positives = 689/768 (89%), Gaps = 1/768 (0%)

Query: 13  RTKKQKLIRSAEEELEAKLGYDLFSEGDKRLGWLLTFASSSLEDEDTRKVYSCIDLYFVS 72
           + K+Q+L   AEE LE++LG+  +++G++RLGWLLTF+ SS EDEDT K+YSC+DLYFVS
Sbjct: 27  KAKEQRLRLGAEELLESRLGFAPYTDGERRLGWLLTFSPSSWEDEDTGKIYSCVDLYFVS 86

Query: 73  QDGSTFKSKYKFRPYFYAATKEKMEMDVEAYLRRRYESQIADIEILEKEDLDLKNHLSGL 132
           QDGSTFK KYKFRPYFYAATK+KME++VEAY+RRRYE +I+DIEI+EKEDLDLKNHLSGL
Sbjct: 87  QDGSTFKVKYKFRPYFYAATKDKMELEVEAYIRRRYEGEISDIEIIEKEDLDLKNHLSGL 146

Query: 133 HKSYLKISFDTVQQLMDVKKDLLHVVERNQAKFDAAEAYESILTGKREQRPQDFLDCIVD 192
            + YLK+ FDTVQQLM V+ DLLHVVE+N+ K DA EA+ESI   KR +RPQD+++ I+D
Sbjct: 147 KRKYLKLQFDTVQQLMHVRNDLLHVVEKNEEKLDAVEAFESIHGVKRVERPQDYINYIID 206

Query: 193 LREYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLLEKRVDLLQRAEVHVCAFDIETTKLP 252
           LREYDVPYH+RFAIDNDVR GQWY+VS+S +  LL++R DLLQRAEVHVCAFDIETTKLP
Sbjct: 207 LREYDVPYHVRFAIDNDVRSGQWYNVSVSGSDVLLQRREDLLQRAEVHVCAFDIETTKLP 266

Query: 253 LKFPDADYDIIMMISYMLDGQGYLI-INRECVGEDIEDLEYTPKPEFEGYFKVTNVNNEI 311
           LKFPDA+YD +MMISYM+DGQG        CVGEDIEDLEYTPKPEFEGYF+V NV  E+
Sbjct: 267 LKFPDAEYDTVMMISYMIDGQGISFRYVSYCVGEDIEDLEYTPKPEFEGYFRVKNVQTEL 326

Query: 312 ELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDKNQGECRAK 371
           +LL+ WF+HMQEVKPGIYVTYNGD+FDWPFLE RAAHHG KM+EE+GFQCD NQGECRAK
Sbjct: 327 DLLKAWFSHMQEVKPGIYVTYNGDFFDWPFLEKRAAHHGIKMNEEIGFQCDNNQGECRAK 386

Query: 372 FACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQMMASYSV 431
           F+CHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFA E+PQ MASYSV
Sbjct: 387 FSCHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAMEQPQTMASYSV 446

Query: 432 SDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVICPNKH 491
           SDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQA+KA+VICPNKH
Sbjct: 447 SDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAFKASVICPNKH 506

Query: 492 QSDPEKFYRNHLLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQLLNNLDRDLQYA 551
           Q+D EKFY N LLESETYIGGHVECLE+GVFRSDLPT F+L+P AYEQL+ NLDRDLQYA
Sbjct: 507 QADLEKFYNNRLLESETYIGGHVECLETGVFRSDLPTKFQLEPLAYEQLIGNLDRDLQYA 566

Query: 552 IKVEGKMDLESVSNYDEVKNAIMEKLLRLQEEPIREECPLIYHLDVAAMYPNIILTNRLQ 611
           I VEGK+D++SV+NYDEVK+AI +KL+ L++ PIREE PLIYHLDVAAMYPNIILTNRLQ
Sbjct: 567 IAVEGKLDIDSVTNYDEVKDAIEQKLVALRDHPIREERPLIYHLDVAAMYPNIILTNRLQ 626

Query: 612 PPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYYHLKKQIESEFVDGTNGH 671
           PPSIVTD  CTACDFNRPGK CLRKLEWVWRGE +M K++DYYH+K+QIESE +      
Sbjct: 627 PPSIVTDVDCTACDFNRPGKNCLRKLEWVWRGETYMAKKNDYYHIKRQIESELIQSGGIA 686

Query: 672 LSKSFLDLPKMEQQSRLKDRLKKYCQKAYKRVLDKPVTELREAGICMRENSFYVDTVRSF 731
            SK FLDL K E   +LKDRLKKYCQKA+KRV+DKP+TE+REAGICMRENSFYVDTVRSF
Sbjct: 687 SSKPFLDLSKPEHLLKLKDRLKKYCQKAHKRVVDKPITEVREAGICMRENSFYVDTVRSF 746

Query: 732 RDRRYEYKGLNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHK 779
           RDRRYEYKGLNK WKGKL+EAKASGNS+KIQEAQDMVVLYDSLQLAHK
Sbjct: 747 RDRRYEYKGLNKTWKGKLAEAKASGNSMKIQEAQDMVVLYDSLQLAHK 794



 Score =  867 bits (2241), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 404/610 (66%), Positives = 481/610 (78%), Gaps = 31/610 (5%)

Query: 1409 DPEVEVLGWQQNAAKIGMQRCAASSQWFNERISLARYAHI-------------------- 1448
            D   + LGWQ  A +  MQRCAAS+QWFNERISLARYAH+                    
Sbjct: 1527 DNNYQALGWQATAGRTSMQRCAASTQWFNERISLARYAHVPLGNFELDWLLFTADVFFSR 1586

Query: 1449 --------LWISDDGVPDLGGTSEEDECFADEVHQPVLTYPGAYRKVSVELKIHHLSVNA 1500
                    LWISDDG+PDLGGT E + CFADEV QP LTYPGAYR+VSVELKIHHL+VNA
Sbjct: 1587 ALRDQQQVLWISDDGIPDLGGTYEGETCFADEVIQPALTYPGAYRRVSVELKIHHLAVNA 1646

Query: 1501 LLKSNQVNEMEGGGLFGFDQDMNSGPYNNELCGFDETTSSAPAFRVVKQLIQRCLTDAVT 1560
            LLKS+QV+EMEGG +  F  D+  GP+  E   FD+ +   PAF+V+KQLIQRC++DAV+
Sbjct: 1647 LLKSSQVDEMEGGSIGSFGNDVPPGPHGTE-TDFDDASLCIPAFQVLKQLIQRCISDAVS 1705

Query: 1561 SGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEFRKLGATIIFANF 1620
            SGNVFADAILQHLYRWLCSP SKLHDP LHR+LH VM+KVFA+LLAEFRKLGA +IFANF
Sbjct: 1706 SGNVFADAILQHLYRWLCSPRSKLHDPALHRLLHNVMKKVFALLLAEFRKLGANVIFANF 1765

Query: 1621 SKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLFMDQYNYGGIPAR 1680
            SK+IIDTGK DLS+A AYCDSLLK LQTR+LFEWIELEP+HFWHSLLFMDQYNYGGI A+
Sbjct: 1766 SKIIIDTGKVDLSSAHAYCDSLLKTLQTRDLFEWIELEPLHFWHSLLFMDQYNYGGIQAK 1825

Query: 1681 AD--ESLDDDSQVDIVSSWNIAEYLPKEIQDHFVLVVSEFMYIPWKHAQKLAASRASLQE 1738
            A   +S D D+ +DIVSSWN+AE LPK+ QDHFVL+VSEF+YIPWK  ++  A++A++++
Sbjct: 1826 AQNVDSSDGDNDIDIVSSWNMAEDLPKDTQDHFVLIVSEFLYIPWKFMKEQVATQATIRD 1885

Query: 1739 GSSCTPSITVAAAENFESHIVQYVKGEISSYFTGKLLSIVRDAIHHMKKMNNDQHNSPGV 1798
             +SCTPS+TV AAEN E  ++ +++ +IS+YF  KLL  V D +HH K  +  + + P  
Sbjct: 1886 DTSCTPSVTVMAAENLEGQVIAHLRDKISNYFADKLLRTVSDILHHFKGKSKHESDEPAN 1945

Query: 1799 MQTAANIHKVDAPLEFIKHVCAAFALDQNVQHDVLVMRKNLLKYVRVREFAPEAEFRDPC 1858
             ++  + HK DA LEFIKHVCA  ALDQNVQHD+L MRKNLLK VRV+EFAPEA+F+DPC
Sbjct: 1946 RESDPHTHKGDAALEFIKHVCAVLALDQNVQHDILRMRKNLLKLVRVKEFAPEAQFQDPC 2005

Query: 1859 PSFILPNVICSYCNDCRDLDLCRDMALLAQDWHCAMPQCGQPYDREVMENALLQIVRQRE 1918
             SF LPNVICSYCNDCRDLDLCRD  L  Q+W CA+PQCGQPY RE MENALLQ+VRQRE
Sbjct: 2006 ASFTLPNVICSYCNDCRDLDLCRDSTLQGQEWRCAVPQCGQPYHREQMENALLQVVRQRE 2065

Query: 1919 RLYHLQDLVCIRCNQVKAAHLAEQCACAGSFRCKEDASDFRSKMQIFLNIANRQGFQLLQ 1978
            RLYHLQDLVC+RC QVKAAHL+EQC+C GSFRCKE++S F SKM++FL +A  Q FQLLQ
Sbjct: 2066 RLYHLQDLVCVRCRQVKAAHLSEQCSCGGSFRCKEESSYFLSKMRVFLKVAVNQKFQLLQ 2125

Query: 1979 ECTSWILEVQ 1988
            +C  WILEV+
Sbjct: 2126 DCVQWILEVR 2135



 Score =  739 bits (1909), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 380/565 (67%), Positives = 439/565 (77%), Gaps = 23/565 (4%)

Query: 855  KKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEFEVDGPYKAMILPAS 914
            KKLTISYPCVMLNVDVARNNTNDQYQTL DPV+KTY THSECSIEFEVDGPYKAMILPAS
Sbjct: 797  KKLTISYPCVMLNVDVARNNTNDQYQTLKDPVNKTYTTHSECSIEFEVDGPYKAMILPAS 856

Query: 915  KEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFLHGSTIEECYSA 974
            KEEGILIKKRYAVFN+DGTLAELKGFEIKRRGELKLIKVFQAE+FDKFLHGST+EECYSA
Sbjct: 857  KEEGILIKKRYAVFNEDGTLAELKGFEIKRRGELKLIKVFQAEVFDKFLHGSTLEECYSA 916

Query: 975  VAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLADYGEQKSCAVTTARRLSDFLG 1034
            VA+VANRWLDLLDNQG DIADSEL+D+ISESSTMSKSL DYGEQKSCAVTTA+RL++FLG
Sbjct: 917  VASVANRWLDLLDNQGIDIADSELLDFISESSTMSKSLVDYGEQKSCAVTTAKRLAEFLG 976

Query: 1035 DTMVKDKGLRCQYIVACEPQGTPVSERAVPVAIFETDAEIMKFYLRKWCKTSSDVGIRSI 1094
            D+MVKDKGL CQYIVA EPQGTPVSERAVPVAIFETD EI K YLRKWC+ SSD  IRSI
Sbjct: 977  DSMVKDKGLHCQYIVAREPQGTPVSERAVPVAIFETDPEIAKHYLRKWCRISSDASIRSI 1036

Query: 1095 VDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLYKKVREKEDKFRQRKLVDIF 1154
            VDWSYYKQRLSSAIQKIITIPAAMQK+SNPVPRV+HPDWL+KKVREK+D+FRQRKL DIF
Sbjct: 1037 VDWSYYKQRLSSAIQKIITIPAAMQKISNPVPRVLHPDWLHKKVREKDDRFRQRKLRDIF 1096

Query: 1155 SSLKKDDFLNKTCNAETNLMDENVEDLEDFPKKRRNSVNGPRPIVRCFEVNNEQKTVKTT 1214
            S L K++ L        NL      D+ED     ++    P   +   + NN       T
Sbjct: 1097 SPLAKEEGLQ-------NL--NRTGDMEDLLISNKDLRKNPSHGLDIDKENNPNGASVGT 1147

Query: 1215 DQVDSLRQQLEPSEVSDQQPSS--QNAIDTENIDRIVDYKGWLELKKRKWKDNLDRRKKQ 1272
               +S +QQ   + + +  P+S  QN    E +D+  DY+GWL+ KKRKWK   +++K++
Sbjct: 1148 GLNNSKKQQNCITGL-NVPPASQIQNDAAEETVDKSTDYQGWLDAKKRKWKYVREQKKRR 1206

Query: 1273 KLGSLRASHQANGVSESLGDMINHKEAQRRTG----VGSYFRRQETAMTRCHWQIIQLVP 1328
            +LG       A    +S   +++ + A +  G      ++F++QE A+ R HWQIIQL  
Sbjct: 1207 RLG-------AAATFDSPNALLSARHANQLPGNSRNRSTFFQKQELALFRSHWQIIQLAS 1259

Query: 1329 SSQSGVFLAWVVVEGIMVRIPITVPRLFYLNSKDPIVEKFPGRRVNKTLPHGRRSFNLIE 1388
            S+  G F AWVV EGIM +IPI VPR FYLNSK P+ E+FPGRRV K LPHGR  FNLIE
Sbjct: 1260 STVPGHFFAWVVAEGIMFKIPINVPRTFYLNSKAPVTEEFPGRRVKKILPHGRPCFNLIE 1319

Query: 1389 VMIDEDQFRKESKKLAALLADPEVE 1413
            V+  E+QFR E KKLAA LA+P+VE
Sbjct: 1320 VVTTEEQFRAEGKKLAAHLAEPDVE 1344


>gi|344229815|gb|EGV61700.1| DNA-directed DNA polymerase epsilon, catalytic subunit A [Candida
            tenuis ATCC 10573]
          Length = 2226

 Score = 1286 bits (3327), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 664/1411 (47%), Positives = 920/1411 (65%), Gaps = 79/1411 (5%)

Query: 25   EELEAKLGYDLFSEGDK-----RLGWLLTFASSSLEDEDTRKVYSCIDLYFVSQDGSTFK 79
            + L++ +G+D    G++     R GWL+   S+++  +D    YS +D YF+ Q+G +FK
Sbjct: 63   DRLDSLMGFDRLQHGEQDGNKPRKGWLINMHSTTIPSDDYLAGYSGVDYYFLDQEGGSFK 122

Query: 80   SKYKFRPYFYAATKEKMEMDVEAYLRRRYE-SQIADIEILEKEDLDLKNHLSGLHKSYLK 138
              Y+F PYF+ + +   E +VE  L+R  E S +  +  L KEDL L NHL GL K  LK
Sbjct: 123  VTYQFDPYFFLSVRVGSESEVEEMLKRFLETSNLKTVGRLYKEDLALPNHLVGLKKCLLK 182

Query: 139  ISFDTVQQLMDVKKDLLHVVERNQAKFDAAEAYESI---------LTGKREQRPQ--DFL 187
            ++F  V  L+  ++ L  +++ N  K D+ + Y  +          +  ++ + Q  D L
Sbjct: 183  LTFHNVTDLLTARRLLAPIIKDNLMKKDSRDIYHGMNLANANYNEFSSSKDGKDQANDPL 242

Query: 188  DCIVDLREYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLLEKRVDLLQRAEVHVCAFDIE 247
              + D+REYDVPYH+R +ID D+R G+WY+V +  +    E+  + +   +  + AFDIE
Sbjct: 243  ILLEDIREYDVPYHVRVSIDKDLRVGKWYNVWVKHSIVTFEEDKETIAFPDPVILAFDIE 302

Query: 248  TTKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNV 307
            TTK PLKFPD+  D +MMISYM+DG+G+LI NRE + EDIED EYTPKPE+ G F + N 
Sbjct: 303  TTKAPLKFPDSRIDQVMMISYMIDGEGFLITNREIISEDIEDFEYTPKPEYPGVFTIFNE 362

Query: 308  NNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDKNQGE 367
             +E  LL  +F H+++ +P +  T+NGD+FDWPF+ETR+  H   M +E+GF  D N GE
Sbjct: 363  PDEKSLLLRFFEHIRDARPTVIATFNGDFFDWPFVETRSRFHDLDMFDEIGFAKD-NDGE 421

Query: 368  CRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQMMA 427
             ++K+  H+DC+ WVKRDSYLPQGSQGLKAVT AKLGY+P E++PE M  +A E+PQ ++
Sbjct: 422  YKSKYCVHMDCYRWVKRDSYLPQGSQGLKAVTTAKLGYNPTELDPELMTPYAYERPQYLS 481

Query: 428  SYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVIC 487
             YSVSDAVATYYLY  YVHPFIFSL TIIP++PDEVLRKG+GTLCEMLLMVQAY   ++ 
Sbjct: 482  EYSVSDAVATYYLYYKYVHPFIFSLCTIIPLNPDEVLRKGTGTLCEMLLMVQAYHHGIVL 541

Query: 488  PNKHQSDPEKFYRNHLLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQLLNNLDRD 547
            PNK+    E+FY  HLLESETY+GGHVE LE+GVFRSD+PT FK+D +A ++L+N+L + 
Sbjct: 542  PNKYSDPVERFYNGHLLESETYVGGHVESLEAGVFRSDIPTQFKMDTTAIDELINDLPKA 601

Query: 548  LQYAIKVEGKMDLESVSNYDEVKNAIMEKLLRLQEEPIREECPLIYHLDVAAMYPNIILT 607
            L++ ++VE K  ++ + N+DEV  +I  +L+ L+  P+R E PLIYH+DVA+MYPNI+ +
Sbjct: 602  LRFFVEVESKKKMDDIENFDEVLESIKAELMELKNNPVRHEVPLIYHVDVASMYPNIMTS 661

Query: 608  NRLQPPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYYHLKKQIESEFVDG 667
            NRLQP S+ ++E C +CDFNRPGK+C R+L+W WRGE    + ++Y  +K+ +++E    
Sbjct: 662  NRLQPDSMKSEEDCASCDFNRPGKSCDRRLQWSWRGEYLPAEMNEYGMIKRSLQNETFPA 721

Query: 668  TNGHL-SKSFLDLPKMEQQSRLKDRLKKYCQKAYKRVLDKPVTELREAGICMRENSFYVD 726
                L  +SF +L   EQ +R+K RL  Y +K Y +V  +  T  RE+ +C REN FYV+
Sbjct: 722  AKPWLPPRSFEELSYSEQATRIKKRLSDYSRKVYHKV-KQTETITRESIVCQRENPFYVN 780

Query: 727  TVRSFRDRRYEYKGLNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHKCILNSFY 786
            TVR FRDRRYE+KGL KVWKGK S+   S ++I   EA+ MVVLYDSLQLAHK ILNSFY
Sbjct: 781  TVRDFRDRRYEFKGLAKVWKGKASKIDKS-DTIGKDEAKKMVVLYDSLQLAHKVILNSFY 839

Query: 787  GYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLPGSFPENF 846
            GYVMRKG+RWYSMEMAG+   TG+ IIQ AR L+E++G+PLELDTDGIWC+LP SFPENF
Sbjct: 840  GYVMRKGSRWYSMEMAGITCLTGSTIIQMARGLVERLGRPLELDTDGIWCILPKSFPENF 899

Query: 847  TFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEFEVDGPY 906
                KD  KKL + YPC MLN  V    TN QYQ LVDP +  YETHSE SI FEVDGPY
Sbjct: 900  PLNCKD-GKKLVVEYPCTMLNYIVHEKFTNHQYQDLVDPDTFKYETHSENSIFFEVDGPY 958

Query: 907  KAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFLHGS 966
            KAMILP SKEEG  +KKRYAVFNDDG+LAELKGFE+KRRGEL+LIK FQ+++F  FL G 
Sbjct: 959  KAMILPTSKEEGKGLKKRYAVFNDDGSLAELKGFELKRRGELQLIKNFQSDIFKLFLEGD 1018

Query: 967  TIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLADYGEQKSCAVTTA 1026
            T++ CY+AVA+VAN WLD+LD +G  + D +LI+ I E+ +MSKSLA+YG+QKS ++TTA
Sbjct: 1019 TLDSCYAAVASVANNWLDVLDTKGGMLEDEDLIELICENRSMSKSLAEYGDQKSTSITTA 1078

Query: 1027 RRLSDFLGDTMVKDKGLRCQYIVACEPQGTPVSERAVPVAIFETDAEIMKFYLRKWCKTS 1086
            +RL +FLG+ MVKD GL  +YI++ +P G+PV+ERAVPV+IF +D +  +++L+KW K  
Sbjct: 1079 KRLGEFLGEEMVKDAGLATKYIISAKPIGSPVTERAVPVSIFSSDKK--EYFLKKWLKDP 1136

Query: 1087 S--DVGIRSIVDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLYKKVREKEDK 1144
            S  +   RS++DW YY +RL+S +QKIITIPAA+Q V NPVPRV HP+WL +++  KEDK
Sbjct: 1137 SLTNFDPRSVIDWDYYYERLASVVQKIITIPAALQDVKNPVPRVPHPEWLQRRISTKEDK 1196

Query: 1145 FRQRKLVDIFSSLKKDDFLNKTCNAETNLMDENVEDLEDFPKKRRNSVNGPRPIVRCFEV 1204
             +Q  L   F   K  D    T  A        ++D+EDF                  EV
Sbjct: 1197 KQQSSLTAFFQ--KPSD----TAKA------RKIKDMEDFGNI-------------ASEV 1231

Query: 1205 NNEQKTVKTTDQVDSLRQQLEPSEVSDQQPSSQNAIDTENIDRIVDYKGWLELKKRKWK- 1263
              + K  K T +   L +  +  +  + +      ++    D +VDY+ +L  +K KWK 
Sbjct: 1232 -GKAKVGKVTSRKRKLTRNKKLVDTEEDEERDNAILNGPCPDMLVDYEAFLIYQKAKWKV 1290

Query: 1264 -DNLDRRKKQKLGSLRASHQANGVSESLGDMINHKEAQRRTGVGSYFRRQETAMTRCHWQ 1322
             +    R+K+  G    S Q                    + VG   RRQ   +    WQ
Sbjct: 1291 QEKSRERRKKLFGQSSESSQR-------------------SSVGGLIRRQAENVAGSDWQ 1331

Query: 1323 IIQLVPS-SQSGVFLAWVVVEGIMVRIPITVPRLFYLNSK-----DPIVEKFPGRRVNKT 1376
            I++     ++ G    +++  G +      +P+  Y + K       ++ +    + N  
Sbjct: 1332 ILEYKEDPNKPGDLKVFIIASGKVHSFNFHIPKRLYASFKTELDLSKVIVQGDVEKSNAI 1391

Query: 1377 LPHGRRSFNLIEVMIDEDQFRKESKKLAALL 1407
            LP+G    NL +  + +  +++E   + ++L
Sbjct: 1392 LPNGHDGTNLYKFTMPQSVYQQEISNVDSIL 1422



 Score =  233 bits (595), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 158/616 (25%), Positives = 281/616 (45%), Gaps = 75/616 (12%)

Query: 1414 VLGWQQNAAKIGMQRCAASSQWFNERISLARYAHI------------------------- 1448
             +GW     K  +      + W    ISL++Y +I                         
Sbjct: 1626 AVGWHSLVTKRVVNHFFVLASWMKNLISLSKYGNIPICNLQAENISYLIDIEYARRLSNS 1685

Query: 1449 ---LWISDDGVPDLGGTSEEDECFADEVHQPVLTYPGAYRKVSVELKIHHLSVNALLKSN 1505
               LW SD  + D GG   +     + +  PV+  P  Y    +E+ I  LS+N +L S+
Sbjct: 1686 NMVLWWSDTPLADHGGFEMDKAPDYENLDFPVINNPEIYETACLEIDIGTLSINTILTSS 1745

Query: 1506 QVNEMEGGGLFG----FDQDMNSGPYNNELCGFDETTSSAPAFRVVKQLIQRCLTDAVTS 1561
             +NE EG  L      FD        NN      E +       V++ +++    DA+ +
Sbjct: 1746 IINEAEGADLVDEGTVFDN-------NNGASTLMEDSFGNAQLNVLRSMVKNWWDDAL-N 1797

Query: 1562 GNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEFRKLGATIIFANFS 1621
             ++ AD+++ HL  W+    S L+D  LH  +H +  K    L+ EF+++ A ++FAN +
Sbjct: 1798 NDINADSMMNHLVSWIQRNSSYLYDFALHYHIHNLTTKALYQLIGEFKRMNANVVFANRN 1857

Query: 1622 KVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLFMDQYNYGGIPARA 1681
            K+ I T K  +  + AY   ++KA + + LF ++E+E V +W  LL+MD+YN+GG   R 
Sbjct: 1858 KIFIQTSKVSVENSYAYGHYIVKAARAKPLFSFLEMEIVKYWDILLWMDEYNFGG---RY 1914

Query: 1682 DESLDDDSQVDI--VSSWNIAEYLP----KEIQDHFVLVV-------SEFMYIPWKHAQK 1728
               + +D   D+  V++W + ++LP     E +D  ++ +       S+ +  P +    
Sbjct: 1915 CTQITNDEIQDLRPVNNWQLQQFLPVIFQNEFEDWLIIFLDALTKFKSDTLKGPTQANTP 1974

Query: 1729 LAASRASLQEGSSCTPSI--TVAAAENFESHIVQYVKGE----ISSYFTGKLLSIVRDAI 1782
                 A + +G     S      A ++F   + +  + +    + S F  +  SI+   +
Sbjct: 1975 RVTQIAHILKGQRKLDSQDDNEEADDDFHDGVTEMFRKQLFKRVKSLFKKQTDSIINPEL 2034

Query: 1783 HHMKKMNNDQHNSPGVMQTAANIHKVDAPLEFIKHVCAAFALDQNVQHDVLVMRKNLLKY 1842
                     ++  P +    +++H  +  L+ +K  CA   L      +V V+R+ LL  
Sbjct: 2035 QK-------EYEFPKL--PGSHLHLRNPCLQLVKFFCAIMGLSTKRSIEVRVLRQELLSI 2085

Query: 1843 VRVREFAPEAEFRDPCPSFILPNVICSYCNDCRDLDLCRDMALLAQDWHCAMPQCGQPYD 1902
              +REF+ EA F +P  S ++P VIC +C+  RD+D+CRD       W C M  C + Y+
Sbjct: 2086 FEIREFSNEAAFHNPSSSLVIPQVICDHCSYTRDIDVCRDPE--KAIWSCTM--CNKSYN 2141

Query: 1903 REVMENALLQIVRQRERLYHLQDLVCIRCNQVKAAHLAEQCACAGSFRCKEDASDFRSKM 1962
            R  +E  L+    +    +  QD+ C +CNQ+K+ +L+E C C+G +       +   ++
Sbjct: 2142 RVAIEEELVTQFSRYFTKFLRQDMKCSKCNQIKSNNLSEYCQCSGKWEETVSYLELEKRI 2201

Query: 1963 QIFLNIANRQGFQLLQ 1978
             +F N+A     QLL+
Sbjct: 2202 HVFQNVAATYNLQLLR 2217


>gi|255716090|ref|XP_002554326.1| KLTH0F02640p [Lachancea thermotolerans]
 gi|238935709|emb|CAR23889.1| KLTH0F02640p [Lachancea thermotolerans CBS 6340]
          Length = 2200

 Score = 1285 bits (3325), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 672/1451 (46%), Positives = 922/1451 (63%), Gaps = 125/1451 (8%)

Query: 7    DRQDG----RRTKKQKLIRSAE-EELEAKLGYDLFS------------EGDKRLGWLLTF 49
            DR +G      T  Q+L+ S + +E++  +G++ ++            E   R GWL+  
Sbjct: 20   DRSNGINTAVNTTAQQLVESTKKDEIDTLMGFERYTAPQHNGKNVSIEETPGRTGWLVNM 79

Query: 50   ASSSLEDED--------TRKVYSCIDLYFVSQDGSTFKSKYKFRPYFYAATKEKMEM-DV 100
              + +  +         +    S +D YF+ ++G  FKS   F PYF  A +++ +  DV
Sbjct: 80   HPTLVPQDSGLTKGSALSPTGVSGVDFYFLDEEGGGFKSTITFDPYFLVACRDESKTNDV 139

Query: 101  EAYLRRRYESQIADIEILEKEDLDLKNHLSGLHKSYLKISFDTVQQLMDVKKDLLHVVER 160
            E YL++  E  +  +E++ K DL + NHL GL ++ LK++F     L + +K L  +V  
Sbjct: 140  EEYLKKHLEHCLKRVEVVIKNDLSMSNHLVGLQRTMLKLTFANTNNLFEARKILRPIVMD 199

Query: 161  NQAKFDAAEAYESILTGKREQRPQDFLDCIVDLREYDVPYHIRFAIDNDVRCGQWYDVSI 220
            N+        Y S          QD    I D+REYDVPYH+R AID D+R G+WY V+ 
Sbjct: 200  NENNQLQRSMYSS-----NNGTAQDTKMLISDIREYDVPYHVRVAIDKDIRVGKWYKVAS 254

Query: 221  SSTGPLLEKRVDLLQRAEVHVCAFDIETTKLPLKFPDADYDIIMMISYMLDGQGYLIINR 280
                 + EK    +  A+  V AFDIETTK PLKFP A  D IMMISYM+DG G+LI NR
Sbjct: 255  QGFLEIKEK----VAFADPVVLAFDIETTKAPLKFPVATVDQIMMISYMIDGDGFLITNR 310

Query: 281  ECVGEDIEDLEYTPKPEFEGYFKVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWP 340
            E + EDIED EY+PKPE+ GYF + N  +E+ LL  +F H+++V+P +  T+NGD+FDWP
Sbjct: 311  EIISEDIEDFEYSPKPEYPGYFTIFNEADELALLERFFEHIRDVRPTVISTFNGDFFDWP 370

Query: 341  FLETRAAHHGFKMSEELGFQCDKNQGECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTK 400
            F+ETRA  +G  M EE+GF  D ++GE ++ +  H+DC+ WVKRDSYLPQGSQGLKAVT+
Sbjct: 371  FVETRAKINGLDMYEEIGFAPD-SEGEYKSTYCAHMDCYRWVKRDSYLPQGSQGLKAVTQ 429

Query: 401  AKLGYDPLEVNPEDMVRFAKEKPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSP 460
            AKLGY+P+E++PE M  +A EKPQ+++ YSVSDAVATYYLYM YVHPF+FSL TIIP++P
Sbjct: 430  AKLGYNPIELDPELMTPYAYEKPQLLSEYSVSDAVATYYLYMKYVHPFVFSLCTIIPLNP 489

Query: 461  DEVLRKGSGTLCEMLLMVQAYKANVICPNKHQSDPEKFYRNHLLESETYIGGHVECLESG 520
            DEVLRKG+GTLCEMLL VQA+K +++ PNKH    E+FY  HLLESETY+GGHVE LE+G
Sbjct: 490  DEVLRKGTGTLCEMLLTVQAFKGDILLPNKHTDPIERFYDGHLLESETYVGGHVESLEAG 549

Query: 521  VFRSDLPTSFKLDPSAYEQLLNNLDRDLQYAIKVEGKMDLESVSNYDEVKNAIMEKLLRL 580
            VFRSD+   F +DP   + LL +L   L++ ++VE    +E V N++EV+ A+ ++L  L
Sbjct: 550  VFRSDIKNHFNIDPEVIDDLLEDLPHALKFCVEVENNCKVEDVVNFEEVRQAVEKRLFDL 609

Query: 581  QEEPIREECPLIYHLDVAAMYPNIILTNRLQPPSIVTDEVCTACDFNRPGKTCLRKLEWV 640
            ++   R E PLIYH+DVA+MYPNI++TNRLQP S+ +D  C +CDFNRPGK+C RKL+W 
Sbjct: 610  KDNTKRHELPLIYHVDVASMYPNIMITNRLQPDSVKSDRDCASCDFNRPGKSCDRKLQWS 669

Query: 641  WRGEIFMGKRSDYYHLKKQIESEFVDGTNGHLSKSFLDLPKM---EQQSRLKDRLKKYCQ 697
            WRGE F  K  +Y  +K+ +++E     N    K FL   ++   +Q + +K RL  YC+
Sbjct: 670  WRGEFFPSKMDEYNMVKRALQNETFPNKNKKSYKQFLSFEELSYSDQVAHIKKRLTDYCK 729

Query: 698  KAYKRVLDKPVTELREAGICMRENSFYVDTVRSFRDRRYEYKGLNKVWKGKLSEAKASGN 757
            K Y RV    V E R A IC REN FYV+TVRSFRDRRYE+KGL K WK K S   +S  
Sbjct: 730  KVYHRVKTNEVVE-RTAIICQRENPFYVNTVRSFRDRRYEFKGLAKNWKQKHSSI-SSEQ 787

Query: 758  SIKIQEAQDMVVLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNAR 817
              +  EA+ MV+LYDSLQLAHK ILNSFYGYVMRKG+RWYSMEMAG+   TGA IIQ AR
Sbjct: 788  KHERDEAKKMVILYDSLQLAHKVILNSFYGYVMRKGSRWYSMEMAGITCLTGATIIQMAR 847

Query: 818  LLIEKIGKPLELDTDGIWCVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTND 877
             ++EKIG+PLELDTDGIWC++P SFP+ F F  K+  KKL +SYPC MLN  V +  TN 
Sbjct: 848  SIVEKIGRPLELDTDGIWCIIPESFPDEFKFNLKN-GKKLFLSYPCSMLNYKVHQKFTNH 906

Query: 878  QYQTLVDPVSKTYETHSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAEL 937
            QYQTLVDPV   YET S+ SI FEVDGPY+AM+LP SKEEG  IKKRYAVFN+DG+LAEL
Sbjct: 907  QYQTLVDPVRHKYETESDNSIFFEVDGPYRAMVLPTSKEEGKGIKKRYAVFNNDGSLAEL 966

Query: 938  KGFEIKRRGELKLIKVFQAELFDKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSE 997
            KGFE+KRRGEL+LIK FQ+++F  FL G ++E CY++VAAVANRWLD+LD++G  + D +
Sbjct: 967  KGFELKRRGELQLIKNFQSDIFKVFLEGDSLEACYASVAAVANRWLDVLDSKGIMLEDED 1026

Query: 998  LIDYISESSTMSKSLADYGEQKSCAVTTARRLSDFLGDTMVKDKGLRCQYIVACEPQGTP 1057
            LI+ I E+ +M+K+L +Y  QKS ++TTA+RL +FLG+ MVKDKGL+C+YI++  P  TP
Sbjct: 1027 LIELICENRSMTKTLKEYEGQKSTSITTAKRLGEFLGEEMVKDKGLQCKYIISSRPLNTP 1086

Query: 1058 VSERAVPVAIFETDAEIMKFYLRKWCKTSS--DVGIRSIVDWSYYKQRLSSAIQKIITIP 1115
            V+ERA+PVAIF  D  + + +LR+W   SS  +   R+I+DW YY++RL+S +QKIITIP
Sbjct: 1087 VTERAIPVAIFSADLALKRSFLRRWLADSSLENFDPRAIIDWDYYRERLASVVQKIITIP 1146

Query: 1116 AAMQKVSNPVPRVVHPDWLYKKVREKEDKFRQRKLVDIFSSLKKDDFLNKTCNAETNLMD 1175
            AA+Q + NPVPRV HPDWL K++   +DKF+Q  L   F S K                 
Sbjct: 1147 AALQSIQNPVPRVEHPDWLKKRISVNDDKFKQTSLTSFFKSSK----------------- 1189

Query: 1176 ENVEDLEDFPKKRRNSVNGPRPIVRCFEVNNEQKTVKTTDQVDSLRQQLEPSEVSDQQPS 1235
                                +P+VR  E   E++ +   ++V  +         S +   
Sbjct: 1190 -------------------VKPLVRDIEDAFEERPISIQNKVGRV--------TSKKHQK 1222

Query: 1236 SQNAIDTENIDRIV---------DYKGWLELKKRKWKDNLDRRKKQKLGSLRASHQANGV 1286
             +N I+ E  + ++         DY GWL  +K KWK  +  R KQ+   L  S   +G+
Sbjct: 1223 RKNMIEEEQENLVLPPTFPSMEEDYIGWLSYQKIKWK--IQARDKQRRTQLFGSR--SGI 1278

Query: 1287 SESLGDMINHKEAQRRTGVGSYFRRQETAMTRCHWQIIQLVPSSQSGVFLAWVVVEGIMV 1346
            SE             RT +G+  R+   +     W+I++   +SQ GV    V+++  + 
Sbjct: 1279 SE-------------RTALGNIMRKHAESYANSTWEILEYRQTSQPGVLDVSVLLDRKIH 1325

Query: 1347 RIPITVPRLFYLNSK----------DPIVEKFPGRRVNKTLPHGRRSFNLIEVMIDEDQF 1396
             +   +P+  Y+  K          + IVEK P     K++    ++  L ++ + ED +
Sbjct: 1326 TLKFKIPKSIYMKFKTNQPSGHGIENCIVEKSPAILPYKSVGSESKT-PLYKLTLPEDDY 1384

Query: 1397 RKESKKLAALL 1407
             +E +K  ++L
Sbjct: 1385 LEEIEKTTSVL 1395



 Score =  187 bits (475), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 151/629 (24%), Positives = 274/629 (43%), Gaps = 89/629 (14%)

Query: 1404 AALLADPEVEVLGWQQNAAKIGMQRCAASSQWFNERISLARYAHI--------------- 1448
            +A LA P    L WQ    K       +  +W    ++L+RY++I               
Sbjct: 1594 SAELALPH---LKWQHIVTKKITNHILSLGKWLQNLMNLSRYSNIPICNIRLEKMSFVID 1650

Query: 1449 -------------LWISDD-GVPDLGGTSEED-----ECFADEVHQPVLTYPGAYRKVSV 1489
                         LW +D   +PD GG SE+D          ++   +   P  Y  V +
Sbjct: 1651 VMYARRLKKDNIVLWWNDVYPLPDHGG-SEKDFNPSMASLMSDLDISITNSPSVYDTVVL 1709

Query: 1490 ELKIHHLSVNALLKSNQVNEMEGGGLFGFDQDMNSGPYNNELCGFDETTSSAPAFRVVKQ 1549
            E+++ +L++N +L S  +NE EG  L   +  +             E + S  +  V++ 
Sbjct: 1710 EIEMSNLTINTVLTSAVINEAEGSDLAESNFSIGGEGEYIGGGALVEDSFSGVSLSVLRA 1769

Query: 1550 LIQRCLTDAVTSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEFR 1609
            L++    DA+   N  AD+++     W+ S  SKL D  L   +H + +K    L+   +
Sbjct: 1770 LLKSLWDDALDE-NETADSLVHAFIHWVQSADSKLFDYALKYHVHNLTKKAILQLVNVCK 1828

Query: 1610 KLGATIIFANFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLFM 1669
             LG+  I+A+  K+++ T K  + +  AY   L+KA++T  LF +++L    +W  L++M
Sbjct: 1829 NLGSEAIYADRGKLLLKTNKVTVESCYAYSQYLIKAIRTAPLFSFLDLSITRYWDLLIWM 1888

Query: 1670 DQYNYGGIPARADESLDDDSQVDI--VSSWNIAEYLPK----EIQDHFVLVVSEFMYIPW 1723
            D +N+GG   RA  S+ D    D+   S W+I  +LP+    E  D  ++++   +    
Sbjct: 1889 DSFNFGG---RACTSIVDSESQDLRAYSQWHIKSFLPRIYQQEFDDWMIIILDSMVKAKE 1945

Query: 1724 KHAQKLAASRASLQEGSSCTPSITVAAAENFESHIVQYVKGEISSYFTGKLLSIVRDAIH 1783
            +H    A S+   Q        IT   + + E         E+     G      +  IH
Sbjct: 1946 RHYFDNAQSQRLTQ--------ITTGKSNDDE---------EVDGVLAGFTHRFGQPLIH 1988

Query: 1784 HMKKMNNDQH---------------NSPGVMQTAANIHKVDAPLEFIKHVCAAFALDQNV 1828
             ++K+   Q                N PG     +++   +  LE +K++C    L +  
Sbjct: 1989 RVQKLFKTQKEYILDPNFSADYAPPNLPG-----SHLKTHNPLLELVKNLCHIMMLSKTQ 2043

Query: 1829 QHDVLVMRKNLLKYVRVREFAPEAEFRDPCPSFILPNVICSYCNDCRDLDLCRDMALLAQ 1888
              +V  +RK LLK   VREF  E+EF+DP  S  + N+ C +C    D+D C+    + +
Sbjct: 2044 TLEVRSLRKELLKIFEVREFDWESEFKDPSYSLKVSNLACEHCAFITDIDFCK----VER 2099

Query: 1889 DWHCAMPQCGQPYDREVMENALLQIVRQRERLYHLQDLVCIRCNQVKAAHLAEQCACAGS 1948
                   QC + ++  +++  L+Q ++   + Y++QDL C +C ++K   ++  C C+GS
Sbjct: 2100 KEFLVCEQCQRLFNNNLLQEHLVQTLQIELQNYYVQDLKCAKCGKIKDELMSSHCPCSGS 2159

Query: 1949 FRCKEDASDFRSKMQIFLNIANRQGFQLL 1977
            +           K+ ++  +A    F ++
Sbjct: 2160 WINSISEEALNKKIIVYRRVAEYFAFDIV 2188


>gi|332019185|gb|EGI59695.1| DNA polymerase epsilon catalytic subunit A [Acromyrmex echinatior]
          Length = 2242

 Score = 1285 bits (3325), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 665/1401 (47%), Positives = 933/1401 (66%), Gaps = 56/1401 (3%)

Query: 32   GYDLFSEGDKRLGWLLTFASSSLEDEDTRKVYSCIDLYFVSQDGSTFKSKYKFRPYFYAA 91
            G+   ++  +R+G+LL   ++ +  ED + + S +D YF+ +D + FK    F PYFY  
Sbjct: 50   GFRRVTDSRERIGFLLNMHATEIV-EDDKHMLSGVDYYFIEEDSTRFKVSLPFSPYFYIL 108

Query: 92   TKEKMEMDVEAYLRRRYESQIADIEILEKEDLDLKNHLSGLHKSYLKISFDTVQQLMDVK 151
             ++    +V  +L ++Y   +  IE + KEDLDL NHL GL + YLK+SF  +  L  VK
Sbjct: 109  CRKDTFEEVSTFLFKKYTGILTKIETIYKEDLDLPNHLIGLKQKYLKLSFANIIDLTKVK 168

Query: 152  KDLLHVVERNQAKFDAAEAYESILTGKREQRPQ--------DFLDCIVDLREYDVPYHIR 203
            +D++  V  N+ +  +   Y  +L    +   Q        D +D I+D+RE+DVP+H+R
Sbjct: 169  RDIMRFVRVNKEREKSNTYYTDMLATTLQPNEQQDSGKQILDHMDNILDIREHDVPHHVR 228

Query: 204  FAIDNDVRCGQWYDV-SISSTGPLLEKRVDLLQRAEVHVCAFDIETTKLPLKFPDADYDI 262
             +ID ++ CG WY V S  S  P++ ++ D+++  E  V A+DIETTKLPLKFPDA  D 
Sbjct: 229  VSIDANIFCGIWYSVKSRGSEPPIIMRKEDMIEPPEPIVLAYDIETTKLPLKFPDASIDQ 288

Query: 263  IMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNVNNEIELLRLWFAHMQ 322
            IMMISYM+DGQGYLI NRE +  DI+D EYTPKPEFEG F + N  NE   +  +F H+ 
Sbjct: 289  IMMISYMIDGQGYLITNRELISADIQDFEYTPKPEFEGPFTIFNEPNEKAAITKFFDHIN 348

Query: 323  EVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDKNQGECRAKFACHLDCFAWV 382
            E++P I+VTYNGD+FDWPF+E RAA H   M E++GF  ++ +G   ++ A H+DC  WV
Sbjct: 349  EIRPHIFVTYNGDFFDWPFVEARAAVHNMDMKEKIGFYKNR-EGVYVSRAAMHMDCLCWV 407

Query: 383  KRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQMMASYSVSDAVATYYLYM 442
            +RDSYLP GSQ LKAV KAKL YDP+E++PEDM R A E+P+++A+YSVSDAVAT+YLY 
Sbjct: 408  RRDSYLPVGSQNLKAVAKAKLRYDPVELDPEDMCRLASEEPEILANYSVSDAVATFYLYQ 467

Query: 443  TYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVICPNKHQSDPEKFYRN- 501
             Y+HPFIF+L TIIPM PDEVLRKGSGTLCE LLMVQA++AN+I PNK +++  K  ++ 
Sbjct: 468  KYIHPFIFALCTIIPMEPDEVLRKGSGTLCESLLMVQAFQANIIFPNKQETELNKLTKDG 527

Query: 502  HLLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQLLNNLDRDLQYAIKVEGKMDLE 561
            HLL+ ETY+GGHVE LESGVFR+D+P  FK+ PSA ++L+  +++ L++ I+ E K+ ++
Sbjct: 528  HLLDQETYVGGHVEALESGVFRADIPCRFKIVPSAVDELIGGVEKALKHTIQEEEKVPID 587

Query: 562  SVSNYDEVKNAIMEKLLRLQEEPIREECPLIYHLDVAAMYPNIILTNRLQPPSIVTDEVC 621
             V+N++E+ N I  KL  L+++P+R E P+IYHLDV AMYPNIILTNRLQP +IV +  C
Sbjct: 588  MVTNFNEIVNEIKGKLKELKDQPLRLENPVIYHLDVGAMYPNIILTNRLQPSAIVNETDC 647

Query: 622  TACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYYHLKKQIESE-FVDGTNGHLSKSFLDLP 680
              CD+N+P   C RK++W+WRGE       +Y  +K+Q+E+E F     G   ++F +L 
Sbjct: 648  AVCDYNKPNALCQRKMKWMWRGEYLAASLGEYQRVKQQLETERFPPQFPGGPKRAFHELT 707

Query: 681  KMEQQSRLKDRLKKYCQKAYKRVLDKPVTELREAGICMRENSFYVDTVRSFRDRRYEYKG 740
              +Q +  K+RL  YC+KAYK+     + E R   IC +ENSFYVDTVR+FRDRRYEYK 
Sbjct: 708  TKDQATYQKNRLTDYCKKAYKKAKITKMEE-RTQMICQKENSFYVDTVRAFRDRRYEYKA 766

Query: 741  LNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHKCILNSFYGYVMRKGARWYSME 800
            L KV K +++ A A G++  I+ A++  VLYDSLQLAHKCILNSFYGYVMR+GARW+SME
Sbjct: 767  LTKVAKRQVAAAIAKGDAADIKSAKNREVLYDSLQLAHKCILNSFYGYVMRRGARWHSME 826

Query: 801  MAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLPGSFPENFTFKTK-DLKKKLTI 859
            M G+V YTGA II  AR +IE+IG+PLELDTDGIWC+LP SFP++    T  + K K T+
Sbjct: 827  MGGIVCYTGAHIIMKAREIIEQIGRPLELDTDGIWCILPASFPDSIIVHTTYEKKSKFTV 886

Query: 860  SYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEFEVDGPYKAMILPASKEEGI 919
            SYP  +LN  V    TN+ Y  LV+  + TYE  SE SI FEVDGPY AM+LPA+KEEG 
Sbjct: 887  SYPNAVLNFMVKDQFTNEVYHELVNKDNLTYEIKSENSIFFEVDGPYLAMVLPAAKEEGK 946

Query: 920  LIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFLHGSTIEECYSAVAAVA 979
             +KKRYAVFN DG+LAELKGFE+KRRGEL+LIK+FQA +F+ FL G+T+EECY++VA  A
Sbjct: 947  KLKKRYAVFNFDGSLAELKGFEVKRRGELQLIKIFQASVFESFLKGNTLEECYASVAKDA 1006

Query: 980  NRWLDLLDNQGKDIADSELIDYISESSTMSKSLADYGEQKSCAVTTARRLSDFLGDTMVK 1039
            + WLDLL ++  ++ DSEL + ISE+ +MS+ L +YG QKS +++TA+RL++FLGD MVK
Sbjct: 1007 DYWLDLLYSKCANMPDSELFELISENKSMSRKLEEYGAQKSTSISTAKRLAEFLGDEMVK 1066

Query: 1040 DKGLRCQYIVACEPQGTPVSERAVPVAIFETDAEIMKFYLRKWCK--TSSDVGIRSIVDW 1097
            D GL C+Y++A +PQ  PV+ERA+P+AIF+++  + + YL+KW K  T     IR I+DW
Sbjct: 1067 DAGLACRYVIANKPQSAPVTERAIPLAIFQSEPAVRRHYLKKWLKDPTLYSEDIRDILDW 1126

Query: 1098 SYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLYKKVREKEDKFRQRKLVDIFSSL 1157
            +YY +RL SAIQKIITIPAAMQ +SNPVPRV HP WL+KKV EK    RQ+K+ DIFS +
Sbjct: 1127 NYYIERLGSAIQKIITIPAAMQGLSNPVPRVQHPPWLHKKVMEKSSSHRQKKITDIFSVV 1186

Query: 1158 KKDDFLNKTCNAETNLMDENVEDLEDFPKKRRNSVNGPRPIV--RCFEVNNEQKTVKTTD 1215
             KD  ++   +AE         D+ED       S   P  IV  R  + ++E +T++   
Sbjct: 1187 DKD--ISHANSAEEPC------DIEDLAGP-STSFTTPMSIVNKRKRQHSDEDETIRAKS 1237

Query: 1216 QVDSLRQQLEPSEVSDQQPSSQNAIDTENIDRIVDYKGWLELKKRKWKDNLDRRKKQKLG 1275
              ++L             P        E +        WLE  K+KW     +R + +  
Sbjct: 1238 WKEAL-----------GSPPPMGKTKEERLK-------WLEFHKKKWAFQAKQRNQHQKK 1279

Query: 1276 SLRASHQANGVSESLGDMINHKEAQRRTGVGSYFRRQETAMTRCHWQIIQLVPSSQSGVF 1335
              + + + +G+      +I +      TG   + RR +  +    W+IIQL  +S+ G+F
Sbjct: 1280 RSK-TDEIDGIG---WGVIRNTNTSTMTG---FLRRAQRKLLETPWEIIQLSETSEPGMF 1332

Query: 1336 LAWVVVEGIMVRIPITVPRLFYLNSKDPIVEKFPG---RRVNKTLPHGRRSFNLIEVMID 1392
              W++V+  + ++ + VPR+FY+N++    +  P    ++  ++LP  R  +NL +  + 
Sbjct: 1333 RLWILVDTQLHQVRLVVPRIFYVNTRKARPDPGPNELWKKSFRSLPRSRPIYNLYQYSLP 1392

Query: 1393 EDQFRKESKKLAALLADPEVE 1413
            E  F++ S++L   L  PE+E
Sbjct: 1393 ESLFQEHSRELLEDLNKPEIE 1413



 Score =  271 bits (694), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 167/572 (29%), Positives = 284/572 (49%), Gaps = 42/572 (7%)

Query: 1441 SLARYAHILWISDDGVPDLGGTSEEDECFA---DEVHQPVLTYPGAYRKVSVELKIHHLS 1497
            +L R   +LW S    PDLGG+  +D       +E        PG Y  V V+L++ +L+
Sbjct: 1670 NLYRNNFVLWCSPTEKPDLGGSENDDNRLLTDFEESSSCAANNPGTYSSVCVQLEVDYLA 1729

Query: 1498 VNALLKSNQVNEMEGGGLF-GFD-------QDMNSGP-YNNELCGFDETTSSAPAFRVVK 1548
            V+ALL+ N +++++G   F  F        QDM  G      +  +DE T   P+F++++
Sbjct: 1730 VSALLQYNHIHDIDGTSTFVAFHNQQRPSIQDMAMGSDAATVIPSYDEITLCNPSFKILR 1789

Query: 1549 QLIQRCLTDAVTSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEF 1608
             ++   L D     N FAD  L H YRWL S ++ L+DP L R LH  M+K++  L+A+F
Sbjct: 1790 NMVNTWLLDVSLYKNTFADYQLIHFYRWLRSSNALLYDPALRRTLHTYMKKLYIQLIAQF 1849

Query: 1609 RKLGATIIFANFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLF 1668
            + LG  I+FANF+K+I+ T K  +S A  Y + +++ +Q +ELF  I++     W  L++
Sbjct: 1850 KTLGCIIVFANFNKIIVCTKKRSVSDALGYIEFVVQTIQNKELFHSIDISCEQCWEYLVW 1909

Query: 1669 MDQYNYGGIPARADESLDDDSQVD----------IVSSWNIAEYLPKEI--QDHFVLVVS 1716
            +D +N+ GI     +S  DD+  +          ++ +W++ E LP E   Q  F  VV+
Sbjct: 1910 LDLHNHAGIKG---QSPKDDTGDENTENDDDDTLLIMNWSLMECLPTEAGCQASFNAVVA 1966

Query: 1717 EFMYIPWK-----HAQKLAASRASLQEGSSCTPSITVAAAENFESHIVQYVKGEISSYFT 1771
             ++   ++             R    +  S    + + A EN      + + GEIS    
Sbjct: 1967 GYIRAVYQCMIENETNNTIRPRRRQSQSQSFIAPLGLGALENTAEFAKKLISGEISQ--- 2023

Query: 1772 GKLLSIVRDAIHHMKKMNNDQHNSPGVMQTAANIHKVDAPLEFIKHVCAAFALDQNVQHD 1831
             +L  I +    ++ +        P +        K++  LE IK VC   +LD+ ++H+
Sbjct: 2024 -RLFKIAQKIHRNLTEKTLTLEEYPNLNMNGKESIKINPALELIKAVCKVLSLDKEMEHE 2082

Query: 1832 VLVMRKNLLKYVRVREFAPEAEFRDPCPSFILPNVICSYCNDCRDLDLCRDMALLAQD-- 1889
            V  ++ NLL+ + V  ++   E+++PC S +LP VIC  CN  RD+DLC+D     ++  
Sbjct: 2083 VYNLKTNLLRLIGVGSYSDNVEWKEPCISLVLPQVICKVCNRTRDIDLCKDEYFTNENNK 2142

Query: 1890 --WHCAMPQCGQPYDREVMENALLQIVRQRERLYHLQDLVCIRCNQVKAAHLAEQCACAG 1947
              W C  P C   YD   +E +L+  + ++   Y LQDL C +C ++K  ++   C+C+G
Sbjct: 2143 FMWKC--PNCDASYDNTEIEFSLIDKLNRKSMAYVLQDLQCRKCKEIKRDNMNLLCSCSG 2200

Query: 1948 SFRCKEDASDFRSKMQIFLNIANRQGFQLLQE 1979
             +       +  S + I  +IA +    +L E
Sbjct: 2201 EYDNLISRDEVTSYVNICKSIATKCKMNILAE 2232


>gi|448527576|ref|XP_003869526.1| Pol2 DNA polymerase epsilon [Candida orthopsilosis Co 90-125]
 gi|380353879|emb|CCG23391.1| Pol2 DNA polymerase epsilon [Candida orthopsilosis]
          Length = 2205

 Score = 1283 bits (3320), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 659/1384 (47%), Positives = 897/1384 (64%), Gaps = 84/1384 (6%)

Query: 25   EELEAKLGYDLFSEGDK-----RLGWLLTFASSSLEDEDTRKVYSCIDLYFVSQDGSTFK 79
            +++++ +G+D F  G+      R GWL+   ++++  ++    YS +D YF+ ++G +FK
Sbjct: 63   DQMDSLMGFDRFEHGENDGNKPRKGWLINMHTTTIPSDNYLTGYSGVDYYFLDEEGGSFK 122

Query: 80   SKYKFRPYFYAAT-KEKMEMDVEAYLRRRYE-SQIADIEILEKEDLDLKNHLSGLHKSYL 137
            +  ++ PYF+  T     E +VE ++R+  E   +     + KEDL L NHL GL K+ +
Sbjct: 123  ASLQYDPYFFIETISSGHESEVEEWMRKFLEICNVKSFGRVTKEDLSLPNHLLGLKKNLI 182

Query: 138  KISFDTVQQLMDVKKDLLHVVERNQAKFDAAEAYESILTGKREQRPQDFLDCIVDLREYD 197
            K++F  +Q L+  ++ L  +++ NQ K D+ +    +     E    D    I D++EYD
Sbjct: 183  KLTFHNIQDLLSARRLLTPIIKDNQMKRDSRD----VFNFNNEVDASDPSQLINDIKEYD 238

Query: 198  VPYHIRFAIDNDVRCGQWYDVSISSTGPLLEKRVDLLQRAE------VHVCAFDIETTKL 251
            VPYH+R +ID  VR G+WY V    +      +VD+++  E        V AFDIETTK 
Sbjct: 239  VPYHVRVSIDKQVRVGKWYYVYAKHS------KVDIVEDKEKVVFPDPVVLAFDIETTKA 292

Query: 252  PLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNVNNEI 311
            PLKFPDA  D IMMISYM+DG+G+LI NRE + EDIED EYTPKPE+ G F + N  +E 
Sbjct: 293  PLKFPDAKIDQIMMISYMIDGEGFLITNREIISEDIEDFEYTPKPEYPGLFTIFNEQDEK 352

Query: 312  ELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDKNQGECRAK 371
             +L  +F H+++ +P +  T+NGD+FDWPF+E RA  H   M +E+GF  D N+GE ++K
Sbjct: 353  HVLVRFFEHIRDARPTVIATFNGDFFDWPFVENRARFHDLDMFDEIGFAKD-NEGEYKSK 411

Query: 372  FACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQMMASYSV 431
            +  H+DCF WVKRDSYLPQGSQGLKAVT AKLGY+P E++PE M  +A EKPQ+++ YSV
Sbjct: 412  YCVHMDCFRWVKRDSYLPQGSQGLKAVTTAKLGYNPTELDPELMTPYAYEKPQLLSEYSV 471

Query: 432  SDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVICPNKH 491
            SDAVATYYLY  YVHPFIFSL TIIP++PDEVLRKG+GTLCEMLL VQAY+ N++ PNKH
Sbjct: 472  SDAVATYYLYYKYVHPFIFSLCTIIPLNPDEVLRKGTGTLCEMLLSVQAYENNILLPNKH 531

Query: 492  QSDPEKFYRNHLLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQLLNNLDRDLQYA 551
                E+FY  HLLESETY+GGHVE LE+GVFRSD+ T FK+DP+A ++LL NL   +++ 
Sbjct: 532  SDPIERFYDGHLLESETYVGGHVESLEAGVFRSDIETDFKVDPTAIDELLGNLHNSIKFC 591

Query: 552  IKVEGKMDLESVSNYDEVKNAIMEKLLRLQEEPIREECPLIYHLDVAAMYPNIILTNRLQ 611
            I+VE    ++ V N+DEV N I E LL ++  P+R E PLIYH+DVA+MYPNI+ +NRLQ
Sbjct: 592  IEVENNKKMDDVENFDEVYNEIKETLLDMKNNPVRNERPLIYHVDVASMYPNIMTSNRLQ 651

Query: 612  PPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYYHLKKQIESEFVDGTNGH 671
            P S+ ++E C ACDFNRPGK C R+L W WRGE +  + ++Y  +K+ +++E   G    
Sbjct: 652  PDSMKSEEDCAACDFNRPGKNCDRRLPWSWRGEYYPAEMNEYNMMKRSLQNEQFPGQKPW 711

Query: 672  L-SKSFLDLPKMEQQSRLKDRLKKYCQKAYKRVLDKPVTELREAGICMRENSFYVDTVRS 730
            L  ++F +L   EQ S +K R+  Y +K Y RV    V   REA IC REN FYVDTVRS
Sbjct: 712  LPPRTFDELSYAEQASAIKKRVSDYSRKVYHRVKQSQVV-TREAIICQRENPFYVDTVRS 770

Query: 731  FRDRRYEYKGLNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHKCILNSFYGYVM 790
            FRDRRYE+KGL KVWKGK+S+   +  + +  +A  MVVLYDSLQLAHK ILNSFYGYVM
Sbjct: 771  FRDRRYEFKGLAKVWKGKVSKIDKNDKAAR-DDANKMVVLYDSLQLAHKVILNSFYGYVM 829

Query: 791  RKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLPGSFPENFTFKT 850
            RKG+RWYSMEMAGV   TGA IIQ AR L+E+IG+PLELDTDGIWC+LP SFPENF  K 
Sbjct: 830  RKGSRWYSMEMAGVTCLTGATIIQMARALVERIGRPLELDTDGIWCILPKSFPENFNLKC 889

Query: 851  KDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEFEVDGPYKAMI 910
            KD  KK+ + YPC MLN  V    TNDQYQ LVDP +  Y+T S+ SI FEVDGPYKAMI
Sbjct: 890  KD-GKKIFLEYPCSMLNYLVHERFTNDQYQDLVDPETFKYKTRSDNSIFFEVDGPYKAMI 948

Query: 911  LPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFLHGSTIEE 970
            LP SKEEG  +KKRYAVFNDDG+LAELKGFE+KRRGEL+LIK FQ+++F  FL G ++E 
Sbjct: 949  LPTSKEEGKGLKKRYAVFNDDGSLAELKGFELKRRGELQLIKNFQSDIFKLFLEGDSLES 1008

Query: 971  CYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLADYGEQKSCAVTTARRLS 1030
            CY AVA VAN WLD+LD +G  + D +LI+ I E+ +MSKSLA+YG+QKS ++TTARRL 
Sbjct: 1009 CYQAVATVANNWLDVLDTKGGMLEDEDLIELICENRSMSKSLAEYGDQKSTSITTARRLG 1068

Query: 1031 DFLGDTMVKDKGLRCQYIVACEPQGTPVSERAVPVAIFETDAEIMKFYLRKWCKTSS--D 1088
            +FLG+ MVKD GL  +YI++ +P G PV+ERA+PV+IF ++ +  + +++KW K  S   
Sbjct: 1069 EFLGEDMVKDSGLATKYIISAKPIGAPVTERAIPVSIFSSEKK--EIFMKKWLKDPSLNK 1126

Query: 1089 VGIRSIVDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLYKKVREKEDKFRQR 1148
               R ++DW YY +RL+S +QKIITIPAA+Q V NPVPRV HPDWL K+V  +E   +Q+
Sbjct: 1127 FSPRDVIDWGYYYERLASVVQKIITIPAALQNVKNPVPRVPHPDWLRKRVENRESTKQQK 1186

Query: 1149 KLVDIFSSLKKDDFLNKTCNAETNLMDENVEDLEDFPKKRRNSVNGPRPIVRCFEVNNEQ 1208
             +   F++  K+              +  V+D+EDF +    +V      VR      ++
Sbjct: 1187 SIAQFFNAGTKE--------------ETKVQDIEDFGEIDTGAVKAKVSAVRL----KKR 1228

Query: 1209 KTVKTTDQVDSLRQQLEPSEVSDQQPSSQNAIDTENIDRIVDYKGWLELKKRKWKDNLDR 1268
            K  +     D            +++  +Q  ++    D   DY G+L+ +K KW      
Sbjct: 1229 KAGRANLVYD-----------FEEEEKNQAVLNGNCPDMTEDYTGFLQFQKAKW------ 1271

Query: 1269 RKKQKLGSLRASHQANGVSESLGDMINHKEAQRRTGVGSYFRRQETAMTRCHWQIIQLVP 1328
                       + QA+G         +  ++ +R+ VG   R+Q   +   +W+I++  P
Sbjct: 1272 -----------TMQASGRERRRKLFGSQAQSAQRSTVGGMMRKQAENIAGSNWEILEYKP 1320

Query: 1329 SS-QSGVFLAWVVVEGIMVRIPITVPRLFYLNSKDPIVEKFP-----GRRVNKTLPHGRR 1382
               + G    +V     +      VP+  Y + K P+  K         + N  LP+   
Sbjct: 1321 DPMKPGDLKVYVSAGEKIHTFNFHVPKRIYASFKSPLTSKSAIIGCEIEKSNAVLPNSHD 1380

Query: 1383 SFNL 1386
            + NL
Sbjct: 1381 ATNL 1384



 Score =  240 bits (612), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 159/605 (26%), Positives = 292/605 (48%), Gaps = 57/605 (9%)

Query: 1415 LGWQQNAAKIGMQRCAASSQWFNERISLARYAHI-------------------------- 1448
            +GWQ   +K  +    A + W    I+L++Y  +                          
Sbjct: 1610 IGWQVLISKRVINHYFALASWIKNLIALSKYGRVPLCNLQIENVGYLIDVEYARRLTENN 1669

Query: 1449 --LWISDDGVPDLGGTSEEDECFADEVHQPVLTYPGAYRKVSVELKIHHLSVNALLKSNQ 1506
              LW S + +PD GG   +     + +  P +  P  Y    +E++I  L++N +L S+ 
Sbjct: 1670 IVLWWSPNPLPDHGGFEMDRVISVESLEFPTINNPEIYETACLEVEIGTLTINTILTSSL 1729

Query: 1507 VNEMEGGGLFGFDQDMNSGPYNNELCGFDETTSSAPAFRVVKQLIQRCLTDAVTSGNVFA 1566
            +NE EG  L    +D      NN    F E + S+PA  +++ +++    DA+   N  A
Sbjct: 1730 INEAEGTDL---AEDGVQFDNNNGASTFAEDSFSSPALSILRSMVKDWWDDAL-GNNANA 1785

Query: 1567 DAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEFRKLGATIIFANFSKVIID 1626
            D ++  L  W+    S L+DP LH  +H +  K    L++EF+++GA +IFA+ +K++I 
Sbjct: 1786 DFVMSSLITWVQKKDSFLYDPSLHYHVHNLSSKALLQLVSEFKRMGAQVIFASRTKMLIQ 1845

Query: 1627 TGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLFMDQYNYGGIPARADESLD 1686
            T K  +  + AY   +LKA +++ LF +++L+ V +W  L++MD++N+GG      E   
Sbjct: 1846 TSKVSVENSFAYGQYILKAARSKPLFHFLDLKIVKYWDILIWMDEFNFGG--RSCTEITS 1903

Query: 1687 DDSQVDIVSS-WNIAEYLPKEIQDHFVLVVSEFMYIPWKHAQKLAASRASLQEGSSCTPS 1745
            +++Q  IV + W I ++LP   Q+ F   V  F+++      K+       Q G   TP 
Sbjct: 1904 EETQDLIVENYWQIKKFLPIVFQNEFEDWV--FIFLDALSQYKMKNLTGGTQSG---TPR 1958

Query: 1746 IT-----VAAAENFESHIVQYVKGEISSYFTGKLLSIVRDAIHHMKKMNNDQHNSPGVMQ 1800
            +T     +   +  ++  VQ V  +I +         ++  I  + +   D   +P   +
Sbjct: 1959 VTQILHILNGQKKLQTQEVQEV-DDIDNGVIEIFRKPLQKRIEKLYRKQIDSIINPEFKK 2017

Query: 1801 -------TAANIHKVDAPLEFIKHVCAAFALDQNVQHDVLVMRKNLLKYVRVREFAPEAE 1853
                     ++++  +  LE +K +CA F+L +    +V +++K LL+   ++EF+ +A 
Sbjct: 2018 EYEFPKLPGSHLNMRNPALELVKFICAVFSLSKKRNIEVRLLKKELLQIFDIKEFSSQAN 2077

Query: 1854 FRDPCPSFILPNVICSYCNDCRDLDLCRDMALLAQDWHCAMPQCGQPYDREVMENALLQI 1913
            F +P  S  L +V+C YCN  RD+DLCRD  +    W+C    C +PY++  +E   +  
Sbjct: 2078 FINPSTSLKLAHVVCDYCNHIRDVDLCRDEEINV--WNCTA--CHRPYNKIALEEETIAN 2133

Query: 1914 VRQRERLYHLQDLVCIRCNQVKAAHLAEQCACAGSFRCKEDASDFRSKMQIFLNIANRQG 1973
            + +    ++ QDL C +C  ++  +L   C C+G++    D  +   ++QIF N+     
Sbjct: 2134 LMKLFTDFYNQDLQCDKCGSIRHGNLDLFCTCSGNWVETVDHVEVDQRVQIFANVGKFYN 2193

Query: 1974 FQLLQ 1978
             QLL+
Sbjct: 2194 MQLLK 2198


>gi|390468377|ref|XP_002807211.2| PREDICTED: LOW QUALITY PROTEIN: DNA polymerase epsilon catalytic
            subunit A [Callithrix jacchus]
          Length = 2199

 Score = 1279 bits (3309), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 686/1458 (47%), Positives = 922/1458 (63%), Gaps = 174/1458 (11%)

Query: 3    RRRWD--------RQDGRRTKKQKLIR----SAEEELEAKLGYDLFSEGDKRLGWLLTFA 50
            RRR D        R DG  +    L R       ++++ + G++   E  ++ GWL+   
Sbjct: 8    RRRADPGVDGEAGRDDGPTSSVSALKRLERSQWTDKMDLRFGFERLKEPGEKTGWLINMH 67

Query: 51   SSSLEDEDTRKVYSCIDLYFVSQDGSTFKSKYKFRPYFYAATKEKMEMDVEAYLRRRYES 110
             + + DED R V S +D YF+  DGS FK    ++PYFY AT++  E +V ++L ++++ 
Sbjct: 68   PTEILDEDKRLV-SAVDYYFIQDDGSRFKVALPYKPYFYIATRKGCEREVSSFLSKKFQG 126

Query: 111  QIADIEILEKEDLDLKNHLSGLHKSYLKISFDTVQQLMDVKKDLLHVVERNQAKFDAAEA 170
            +IA +E + KEDLDL NHL GL ++Y+K+SF TV+ L+ V+K++   V++N+ +  A++ 
Sbjct: 127  KIAKVETVPKEDLDLPNHLVGLKRNYIKLSFHTVEDLVKVRKEIFPAVKKNREQDHASDT 186

Query: 171  YESILTG------------KREQRPQDFLDCIVDLREYDVPYHIRFAIDNDVRCGQWYDV 218
            Y ++L+             +  ++  D LD IVD+REYDVPYHIR +ID  +    WY+V
Sbjct: 187  YTAMLSSVLQRTSVITDEEEASKKIADQLDNIVDMREYDVPYHIRLSIDLKIHVAHWYNV 246

Query: 219  SISSTGPLLE--KRVDLLQRAEVHVCAFDIETTKLPLKFPDADYDIIMMISYMLDGQGYL 276
                    +E  +R DL++R +  V AFDIETTKLPLKFPDA+ D IMM+SYM+DGQGYL
Sbjct: 247  RYRGNAFPVEITRRDDLVERPDPVVLAFDIETTKLPLKFPDAETDQIMMVSYMIDGQGYL 306

Query: 277  IINRECVGEDIEDLEYTPKPEFEGYFKVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDY 336
            I NRE V EDIED E+TPKPE+EG F V N  +E  L++ WF H+QE +P + VTYNGD+
Sbjct: 307  ITNREIVSEDIEDFEFTPKPEYEGPFCVFNEPDEAHLIQRWFEHVQETRPTVMVTYNGDF 366

Query: 337  FDWPFLETRAAHHGFKMSEELGFQCDKNQGECRAKFACHLDCFAWVKRDSYLPQGSQGLK 396
            FDWPF+E RAA HG  M +E+GFQ D +QGE +A    H+DC  WVKRDSYLP GS  LK
Sbjct: 367  FDWPFVEARAAVHGLSMQQEIGFQKD-SQGEYKAPQCIHMDCLRWVKRDSYLPVGSHNLK 425

Query: 397  AVTKAKLGYDPLEVNPEDMVRFAKEKPQMMASYSVSDAVATYYLYMTYVHPFIFSLATII 456
            A  KAKLGYDP+E++PEDM R A E+PQ +A+YSVSDAVATYYLYM YVHPFIF+L TII
Sbjct: 426  AAAKAKLGYDPVELDPEDMCRMATEQPQTLATYSVSDAVATYYLYMKYVHPFIFALCTII 485

Query: 457  PMSPDEVLRKGSGTLCEMLLMVQAYKANVICPNKHQSDPEKFYRN-HLLESETYIGGHVE 515
            PM PDEVLRKGSGTLCE LLMVQA+ AN+I PNK + +  K   + H+L+SETY+GGHVE
Sbjct: 486  PMEPDEVLRKGSGTLCEALLMVQAFHANIIFPNKQEQEFNKLTDDGHVLDSETYVGGHVE 545

Query: 516  CLESGVFRSDLPTSFKLDPSAYEQLLNNLDRDLQYAIKVEGKMDLESVSNYDEVKNAIME 575
             LESGVFRSD+P  F+++P+A++ LL  +++ L++AI+ E K+ +E V+N+ E+ + I  
Sbjct: 546  ALESGVFRSDIPCRFRMNPAAFDFLLQRVEKTLRHAIEEEEKVPVEQVTNFQELCDQIKS 605

Query: 576  KLLRLQEEPIREECPLIYHLDVAAMYPNIILTNRLQPPSIVTDEVCTACDFNRPGKTCLR 635
            KL  L+E P R ECPLIYHLDV AMYPNIILTNRLQP ++V +  C ACDFN+PG  C R
Sbjct: 606  KLASLKEVPNRIECPLIYHLDVGAMYPNIILTNRLQPSAMVDEATCAACDFNKPGANCQR 665

Query: 636  KLEWVWRGEIFMGKRSDYYHLKKQIESE-----FVDGTNGHLSKSFLDLPKMEQQSRLKD 690
            +      GE     RS+Y+ ++ Q+ESE     F +G     +++F +L + EQ    K 
Sbjct: 666  RWSCSXEGEFMPASRSEYHRIQHQLESEKFPSLFPEGP----ARAFHELSREEQAKYEKR 721

Query: 691  RLKKYCQKAYKRVLDKPVTELREAGICMRENSFYVDTVRSFRDRRYEYKGLNKVWKGKLS 750
            RL  YC+KAYK++    V E R   IC RENSFYVDTVR+FRDRRYE+KGL+KVWK KLS
Sbjct: 722  RLADYCRKAYKKIHITKVEE-RLTTICQRENSFYVDTVRAFRDRRYEFKGLHKVWKKKLS 780

Query: 751  EAKASGNSIKIQEAQDMVVLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGA 810
             A   G++ +++  ++M VLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAG+V +TGA
Sbjct: 781  AAVEVGDAAEVKRCKNMEVLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGIVCFTGA 840

Query: 811  KIIQNARLLIEKIGKPLELDTDGIWCVLPGSFPENFTFKTKDLKK-KLTISYPCVMLNVD 869
             II  AR LIE+IG+PLELDTDGIWCVLP SFPENF FKT ++KK K+TISYP  MLN+ 
Sbjct: 841  NIITQARELIEQIGRPLELDTDGIWCVLPNSFPENFVFKTTNVKKPKVTISYPGAMLNLM 900

Query: 870  VARNNTNDQYQTLVDPVSKTYETHSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFN 929
            V    TNDQYQ L +P S TY T SE SI FEVDGPY AMILPASKEEG  +KKRYAVFN
Sbjct: 901  VKEGFTNDQYQELAEPSSLTYVTRSENSIFFEVDGPYLAMILPASKEEGKKLKKRYAVFN 960

Query: 930  DDGTLAELKGFEIKRRGELKLIKVFQAELFDKFLHGSTIEECYSAVAAVANRWLDLLDNQ 989
            +DG+LA                 +  +ELF+                             
Sbjct: 961  EDGSLAA---------------NMPDSELFE----------------------------- 976

Query: 990  GKDIADSELIDYISESSTMSKSLADYGEQKSCAVTTARRLSDFLGDTMVKDKGLRCQYIV 1049
                        ISE+ +MS+ L DYGEQKS +++TA+RL++FLGD MVKD GL C+YI+
Sbjct: 977  -----------LISENRSMSRKLEDYGEQKSTSISTAKRLAEFLGDQMVKDAGLSCRYII 1025

Query: 1050 ACEPQGTPVSERAVPVAIFETDAEIMKFYLRKWCKTSS--DVGIRSIVDWSYYKQRLSSA 1107
            + +P+G+PV+ERA+P+AIF+ +  + K +LRKW K+SS  D  IR+I+DW YY +RL SA
Sbjct: 1026 SRKPEGSPVTERAIPLAIFQAEPTVRKHFLRKWLKSSSLQDFDIRAILDWDYYIERLGSA 1085

Query: 1108 IQKIITIPAAMQKVSNPVPRVVHPDWLYKKVREKEDKFRQRKLVDIFSSLKKDDFLNKTC 1167
            IQKIITIPAA+Q+V NPVPRV HPDWL+KK+ EK D ++Q+K+ ++F+   +   +    
Sbjct: 1086 IQKIITIPAALQQVKNPVPRVKHPDWLHKKLLEKNDVYKQKKISELFTLEGRRQVM--MA 1143

Query: 1168 NAETNLMDENVEDLEDFPKKRRNSVNGPRPIVRCFEVNNEQKTVKTTDQVDSLRQQLEPS 1227
             A  + +  +  D+EDF       V  P P      +  ++K V    Q +S  Q L P+
Sbjct: 1144 QAPGDSLRPSAPDMEDF-----GLVKPPHPPA---HIAVKRKRVLWESQEES--QDLTPT 1193

Query: 1228 ----EVSDQQPSSQNAIDTENIDRIVDYKGWLELKKRKW----KDNLDRRKKQKLGSLRA 1279
                E+  Q P    A+ T   + +V    WL   K+KW    +  L RRK+Q+L S   
Sbjct: 1194 VPWQEILGQPP----ALGTTQEEWLV----WLRFHKKKWQLQARQRLARRKRQRLESAEG 1245

Query: 1280 SHQANGVSESLGDMINHKEAQRRTGVGSYFRRQETAMTRCHWQIIQ----LVPSSQSGVF 1335
              +   + +              TG+GS+ RR   ++    WQI+Q    L P ++S ++
Sbjct: 1246 VPRPGAIRDGPA-----------TGLGSFLRRTARSILDLPWQIVQVHCHLHPMTRSSLY 1294

Query: 1336 LAWVVVEGIMVRIPITVPRLFYLNSKDPIVEKFPGRRVNKTLPHGRRSFNLIEVMIDEDQ 1395
                                                +VN+ LP     +NL E  + ED 
Sbjct: 1295 SC----------------------------------QVNRVLPRSNVVYNLYEYSVPEDM 1320

Query: 1396 FRKESKKLAALLADPEVE 1413
            +++   ++   L+ P++E
Sbjct: 1321 YQEHINEINTELSAPDIE 1338



 Score =  314 bits (805), Expect = 3e-82,   Method: Compositional matrix adjust.
 Identities = 187/607 (30%), Positives = 303/607 (49%), Gaps = 67/607 (11%)

Query: 1442 LARYAHILWISDDGVPDLGGTSEEDECFA---DEVHQPVLTYPGAYRKVSVELKIHHLSV 1498
            L R+ H+LW+S    PDLGG   +D       D+     +   G Y  V +EL + +L+V
Sbjct: 1591 LQRHNHLLWLSPTARPDLGGKEADDNRLVMEFDDQATVEINSSGCYSTVCMELDLQNLAV 1650

Query: 1499 NALLKSNQVNEMEGGGLFGFDQD----------MNSGPYNNELCGFDETTSSAPAFRVVK 1548
            N +L+S+ VN+MEG    G   D          +  G   +    +DET   +  FR++K
Sbjct: 1651 NTILQSHHVNDMEGADSMGISFDVIQQASLEDMITGGQAASAPASYDETALCSNTFRILK 1710

Query: 1549 QLIQRCLTDAVTSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEF 1608
             ++   + +     N++AD  + H YRWL SP S L+DP LHR LH +M+K+F  L+AEF
Sbjct: 1711 SMVVGWVKEITQYHNIYADNQVMHFYRWLRSPSSLLYDPALHRTLHNMMKKLFLQLIAEF 1770

Query: 1609 RKLGATIIFANFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLF 1668
            ++LG+++I+ANF+++I+ T K  +  A AY + +  ++ ++E+F  + +     W  LL+
Sbjct: 1771 KRLGSSVIYANFNRIILCTKKRRVEDAIAYVEYITSSIHSKEIFHSLTISFSRCWEFLLW 1830

Query: 1669 MDQYNYGGIPARADESLD---DDSQVD-------------------------------IV 1694
            MD  NYGGI  +    +     DSQ                                 + 
Sbjct: 1831 MDPSNYGGIKGKVSSRIHCGLQDSQKAGGAADEQEDEDEEEEREGEEEDAEESDVEDLLE 1890

Query: 1695 SSWNIAEYLPK--EIQDHFVLVVSEFMYIPWKHAQKLAASRASLQEGSSCTPSITVAAAE 1752
            +SWNI ++LP+    Q +F+++VS ++   + H  K    R++   GS+       +   
Sbjct: 1891 NSWNILQFLPQAASCQSYFLMIVSAYIVAVY-HCMKDGLRRSA--PGSTPVRRRGASQLS 1947

Query: 1753 NFESHIVQYVKGEIS---SYFTGKLLSIVRDAIHHMKKMNNDQHNSPGVMQT-----AAN 1804
                     + G I+    Y   +L          ++K      NS  + +       ++
Sbjct: 1948 QEAEETAGALPGMITFSQDYVANELTQSFFTITQKIQKKVTGSRNSAELSEMFPVLPGSH 2007

Query: 1805 IHKVDAPLEFIKHVCAAFALDQNVQHDVLVMRKNLLKYVRVREFAPEAEFRDPCPSFILP 1864
            +   +  LEFIK+VC   +LD N+ + V  + ++LL+ V V EF+ EA+FRDPC S++LP
Sbjct: 2008 LLLNNPALEFIKYVCKVLSLDTNITNQVNKLNRDLLRLVDVGEFSEEAQFRDPCRSYVLP 2067

Query: 1865 NVICSYCNDCRDLDLCRDMA-----LLAQDWHCAMPQCGQPYDREVMENALLQIVRQRER 1919
             VIC  CN CRDLDLC+D +     ++   W C  P C   YD   +E AL+++++++  
Sbjct: 2068 EVICRSCNFCRDLDLCKDSSFSEDGVVLPQWLC--PNCQAAYDSSAIEMALVEVLQKKLM 2125

Query: 1920 LYHLQDLVCIRCNQVKAAHLAEQCACAGSFRCKEDASDFRSKMQIFLNIANRQGFQLLQE 1979
             + LQDLVC++C  VK  H+   C+CAG F        F  +++IF NIA   G   L E
Sbjct: 2126 AFTLQDLVCLKCRGVKETHMPVYCSCAGDFALTIHTKVFMEQIRIFQNIAQHYGMSYLLE 2185

Query: 1980 CTSWILE 1986
               W+L+
Sbjct: 2186 TLEWLLQ 2192


>gi|354546168|emb|CCE42897.1| hypothetical protein CPAR2_205400 [Candida parapsilosis]
          Length = 2219

 Score = 1277 bits (3305), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 663/1386 (47%), Positives = 898/1386 (64%), Gaps = 88/1386 (6%)

Query: 25   EELEAKLGYDLFSEGDK-----RLGWLLTFASSSLEDEDTRKVYSCIDLYFVSQDGSTFK 79
            +++++ +G+D F  G+      R GWL+   ++++  +     YS +D YF+ ++G +FK
Sbjct: 64   DQMDSLMGFDRFEHGENDGNKPRKGWLINMHATTIPSDGYLTGYSGVDYYFLDEEGGSFK 123

Query: 80   SKYKFRPYFYAAT-KEKMEMDVEAYLRRRYE-SQIADIEILEKEDLDLKNHLSGLHKSYL 137
            +  ++ PYF+  T     E +VE ++R+  E   +     + KEDL L NHL GL K+ +
Sbjct: 124  ATLQYDPYFFIETIAPGHESEVEEWMRKHLEICNVKSFGRVTKEDLSLPNHLLGLKKNLI 183

Query: 138  KISFDTVQQLMDVKKDLLHVVERNQAKFDAAEAYESILTGKREQRPQDFLDCIVDLREYD 197
            K++F  +Q L+  ++ L  +++ NQ K ++ +    +     E    D    I D++EYD
Sbjct: 184  KLTFHNIQDLLSARRLLTPIIKDNQMKRESRD----VFNFSNEVDASDPSQLISDIKEYD 239

Query: 198  VPYHIRFAIDNDVRCGQWYDVSISSTGPLLEKRVDLLQRAE------VHVCAFDIETTKL 251
            VPYH+R +ID  VR G+WY V    +      +VD+++  E        V AFDIETTK 
Sbjct: 240  VPYHVRVSIDKQVRVGKWYYVYAKHS------KVDIVEDKEKVVFPDPVVLAFDIETTKA 293

Query: 252  PLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNVNNEI 311
            PLKFPDA  D +MMISYM+DG+G+LI NRE + EDIED EYTPKPE+ G F + N  +E 
Sbjct: 294  PLKFPDAKIDQVMMISYMIDGEGFLITNREIISEDIEDFEYTPKPEYPGLFTIFNEQDEK 353

Query: 312  ELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDKNQGECRAK 371
             +L  +F H+++ +P +  T+NGD+FDWPF+E RA  H   M  E+GF  D N+GE ++K
Sbjct: 354  HVLMRFFEHIRDARPTVIATFNGDFFDWPFVENRARFHDLDMFNEIGFAKD-NEGEYKSK 412

Query: 372  FACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQMMASYSV 431
            +  H+DCF WVKRDSYLPQGSQGLKAVT AKLGY+P E++PE M  +A EKPQ+++ YSV
Sbjct: 413  YCVHMDCFRWVKRDSYLPQGSQGLKAVTTAKLGYNPTELDPELMTPYAYEKPQLLSEYSV 472

Query: 432  SDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVICPNKH 491
            SDAVATYYLY  YVHPFIFSL TIIP++PDEVLRKG+GTLCEMLL VQAY+ N++ PNKH
Sbjct: 473  SDAVATYYLYYKYVHPFIFSLCTIIPLNPDEVLRKGTGTLCEMLLSVQAYENNILLPNKH 532

Query: 492  QSDPEKFYRNHLLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQLLNNLDRDLQYA 551
                E+FY  HLLESETY+GGHVE LE+GVFRSD+ T FK+DP+A ++LL NL   +++ 
Sbjct: 533  SDPIERFYDGHLLESETYVGGHVESLEAGVFRSDIETDFKVDPTAIDELLGNLHNSIKFC 592

Query: 552  IKVEGKMDLESVSNYDEVKNAIMEKLLRLQEEPIREECPLIYHLDVAAMYPNIILTNRLQ 611
            I+VE    +E V N+DEV N I E LL ++  P+R+E PLIYH+DVA+MYPNI+ +NRLQ
Sbjct: 593  IEVENNKKMEDVENFDEVYNEIKETLLDMKNNPVRKEVPLIYHVDVASMYPNIMTSNRLQ 652

Query: 612  PPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYYHLKKQIESEFVDGTNGH 671
            P S+ T+E C  CDFNRPGK C R+L W WRGE +  + ++Y  +K+ +++E   G    
Sbjct: 653  PDSMKTEEDCATCDFNRPGKNCDRRLPWSWRGEYYPAEMNEYNMMKRTLQNEKFPGLKPW 712

Query: 672  L-SKSFLDLPKMEQQSRLKDRLKKYCQKAYKRVLDKPVTELREAGICMRENSFYVDTVRS 730
            L  ++F +L   EQ S +K R+  Y +K Y RV    V   REA IC REN FYVDTVRS
Sbjct: 713  LPPRTFDELSYAEQASAIKKRVSDYSRKVYHRVKQSQVV-TREAIICQRENPFYVDTVRS 771

Query: 731  FRDRRYEYKGLNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHKCILNSFYGYVM 790
            FRDRRYE+KGL KVWKGK+++   +  + +  +A  MVVLYDSLQLAHK ILNSFYGYVM
Sbjct: 772  FRDRRYEFKGLAKVWKGKVNKIDRNDKAAR-DDANKMVVLYDSLQLAHKVILNSFYGYVM 830

Query: 791  RKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLPGSFPENFTFKT 850
            RKG+RWYSMEMAGV   TGA IIQ AR L+E+IG+PLELDTDGIWC+LP SFPENF  K 
Sbjct: 831  RKGSRWYSMEMAGVTCLTGATIIQMARALVERIGRPLELDTDGIWCILPKSFPENFNLKC 890

Query: 851  KDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEFEVDGPYKAMI 910
            KD  KK+ + YPC MLN  V    TNDQYQ LVDP +  Y+T S+ SI FEVDGPYKAMI
Sbjct: 891  KD-GKKIFLEYPCSMLNYLVHERFTNDQYQDLVDPETFKYKTRSDNSIFFEVDGPYKAMI 949

Query: 911  LPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFLHGSTIEE 970
            LP SKEEG  +KKRYAVFNDDG+LAELKGFE+KRRGEL+LIK FQ+++F  FL G ++E 
Sbjct: 950  LPTSKEEGKGLKKRYAVFNDDGSLAELKGFELKRRGELQLIKNFQSDIFKLFLEGDSLES 1009

Query: 971  CYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLADYGEQKSCAVTTARRLS 1030
            CY AVA VAN WLD+LD +G  + D +LI+ I E+ +MSKSLA+YG+QKS ++TTARRL 
Sbjct: 1010 CYQAVATVANNWLDVLDTKGGMLEDEDLIELICENRSMSKSLAEYGDQKSTSITTARRLG 1069

Query: 1031 DFLGDTMVKDKGLRCQYIVACEPQGTPVSERAVPVAIFETDAEIMKFYLRKWCKTSS--D 1088
            +FLG+ MVKD GL  +YI++ +P G PV+ERA+PV+IF ++ +  + +++KW K  S   
Sbjct: 1070 EFLGEDMVKDAGLATKYIISAKPIGAPVTERAIPVSIFSSEKK--EIFMKKWLKDPSLNK 1127

Query: 1089 VGIRSIVDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLYKKVREKEDKFRQR 1148
               R ++DW YY +RL+S +QKIITIPAA+Q V NPVPRV HPDW+ K+V  +E   +Q+
Sbjct: 1128 FSPRDVIDWGYYYERLASVVQKIITIPAALQNVKNPVPRVPHPDWMRKRVENRESSKQQK 1187

Query: 1149 KLVDIFSSLKKDDFLNKTCNAETNLMDENVEDLEDFPKKRRNSVNGPRPIVRCFEVNNEQ 1208
             +   F++  KDD  NK            V+D+EDF +    +V      V+      ++
Sbjct: 1188 SIGQFFNAATKDD--NK------------VQDIEDFGEIDTGAVKAKMSSVKL----RKR 1229

Query: 1209 KTVKTTDQVDSLRQQLEPSEVSDQQPSSQNAIDTENIDRIVDYKGWLELKKRKWKDNLDR 1268
            K  +     D           S+++  +Q  ++    D   DY G+L  +K KW      
Sbjct: 1230 KAGRANLVYD-----------SEEEEKNQAILNGTCPDMTKDYVGFLLFQKAKWAMQASS 1278

Query: 1269 RKKQK--LGSLRASHQANGVSESLGDMINHKEAQRRTGVGSYFRRQETAMTRCHWQIIQL 1326
            R++++   GS   S Q                   R+ VG   R+Q   +   +W+I++ 
Sbjct: 1279 RERRRKLFGSQAQSAQ-------------------RSTVGGMMRKQAENIAGSNWEILEY 1319

Query: 1327 VPSS-QSGVFLAWVVVEGIMVRIPITVPRLFYLNSKDPIVEK--FPG---RRVNKTLPHG 1380
             P   + G    +V     +      VP+  Y + K P+  K    G    + N  LP+ 
Sbjct: 1320 KPDPMKPGDLKVYVSAGEKIHTFNFHVPKRVYASFKSPLTAKQSIVGCEIEKSNAILPNS 1379

Query: 1381 RRSFNL 1386
              + NL
Sbjct: 1380 HDATNL 1385



 Score =  237 bits (604), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 161/626 (25%), Positives = 295/626 (47%), Gaps = 70/626 (11%)

Query: 1407 LADPEVEVLGWQQNAAKIGMQRCAASSQWFNERISLARYAHI------------------ 1448
            +++  +  +GWQ   +K  M    A + W    I+L++Y  +                  
Sbjct: 1603 ISELTLPAIGWQVLISKRVMNHYFALASWIKNLIALSKYGRVPLCNLQIENVGYLIDVEY 1662

Query: 1449 ----------LWISDDGVPDLGGTSEEDECFADEVHQPVLTYPGAYRKVSVELKIHHLSV 1498
                      LW S + +PD GG   +     + +  P +     Y    +E++I  L++
Sbjct: 1663 ARRLTENNIVLWWSPNPLPDHGGFEMDRVLNLESLEFPTINNSEVYETTCLEVEIGTLTI 1722

Query: 1499 NALLKSNQVNEMEGGGLF--GFDQDMNSGPYNNELCGFDETTSSAPAFRVVKQLIQRCLT 1556
            N +L S+ +NE EG  L   G   D N G        F E + S+PA  +++ +++    
Sbjct: 1723 NTILTSSLINEAEGTDLAEDGVQFDNNHGA-----STFAEDSFSSPALSLLRSMVKDWWD 1777

Query: 1557 DAVTSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEFRKLGATII 1616
            DA+   NV AD ++  L  W+    S L+DP LH  +H +  K    L++EF+++GA +I
Sbjct: 1778 DAL-GNNVNADFVMSALITWVQKKDSFLYDPSLHYHVHNLSSKALLQLVSEFKRMGAQVI 1836

Query: 1617 FANFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLFMDQYNYGG 1676
            FAN +K++I T K  +  + AY   +LKA +++ LF +++L+ V +W  L++MD++NYGG
Sbjct: 1837 FANRTKMLIQTSKVSVENSFAYGQYILKAARSKPLFNFLDLKIVKYWDILIWMDEFNYGG 1896

Query: 1677 IPARADESLDDDSQVDIVSSWNIAEYLPKEIQDHFVLVVSEFM-YIPWKHAQKLAASRAS 1735
                 + + ++  ++ + ++W I ++LP   Q+ F   +  F+  +    A+ L  + A 
Sbjct: 1897 -RGCIEITREERQELVVENNWQIKKFLPIVFQNEFEDWIFIFLDALSQYKAKNLTGAGAG 1955

Query: 1736 LQEGSSC-------TPSIT----------------VAAAENFESHIVQYVKGEISSYFTG 1772
               G+         TP +T                +   +N ++ +++  +  +      
Sbjct: 1956 AGAGAGAGGATQFGTPRVTQIFHILNGQKKLQTQEIQEVDNLDNGVIEIFRKPLQKRIEK 2015

Query: 1773 KLLSIVRDAIHHMKKMNNDQHNSPGVMQTAANIHKVDAPLEFIKHVCAAFALDQNVQHDV 1832
                 +   I+   K   +  N PG      N       LE +K +CA F+L +N   +V
Sbjct: 2016 LYRKQIDSIINPEFKKEYEFPNLPGSYLKMRN-----PALELVKFICAVFSLSKNRNIEV 2070

Query: 1833 LVMRKNLLKYVRVREFAPEAEFRDPCPSFILPNVICSYCNDCRDLDLCRDMALLAQDWHC 1892
             +++K LL+   V+EF+ +A F +P  S  LP+VIC YCN  RD+DLCRD  +    W+C
Sbjct: 2071 RLLKKELLQIFDVKEFSSQANFINPSTSLRLPHVICDYCNHIRDVDLCRDEEINV--WNC 2128

Query: 1893 AMPQCGQPYDREVMENALLQIVRQRERLYHLQDLVCIRCNQVKAAHLAEQCACAGSFRCK 1952
                C +PY++  +E   +  + +    ++ QDL C +C  ++  +L   C C+G++   
Sbjct: 2129 T--ACHRPYNKIALEEETIARLMKILTDFYSQDLQCDKCGSIRQGNLDLFCTCSGNWVET 2186

Query: 1953 EDASDFRSKMQIFLNIANRQGFQLLQ 1978
             + ++    +Q+F N+      QLL 
Sbjct: 2187 VNHAEVDKWVQVFANVGKYYNMQLLN 2212


>gi|406701363|gb|EKD04511.1| DNA polymerase epsilon, catalytic subunit a [Trichosporon asahii var.
            asahii CBS 8904]
          Length = 2211

 Score = 1276 bits (3301), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 658/1422 (46%), Positives = 898/1422 (63%), Gaps = 134/1422 (9%)

Query: 25   EELEAKLGYDLFSEG----DKRLGWLLTFASSSLEDEDTRKVYSCIDLYFVSQDGSTFKS 80
            + ++  LG+  F  G    + R GWL+   S+ LE +      + +D YF+  DGS FK+
Sbjct: 67   DAIDEALGFPRFESGRVGGESREGWLVNMHSTLLESDTHAGGLAAVDYYFIQDDGSMFKA 126

Query: 81   KYKFRPYFYAATKEKMEMDVEAYLRRRYESQIADIEILEKEDLDLKNHLSGLHKSYLKIS 140
                 PYFY   +   E  VE +L +R+E  +      +K DL + NHL       LK+ 
Sbjct: 127  TIPHEPYFYLTCRAGTETMVEEWLVKRFEGLVVRTAREKKWDLAVPNHLLSAPPVLLKLF 186

Query: 141  FDTVQQLMDVKKDLLHVVERNQAKFDAAEAYESILTGKREQRP----------------- 183
            F     L  V+++LL +   N +KF A +AY  ++  +  QR                  
Sbjct: 187  FHNTADLQAVRRELLPLAIANASKFTAVDAYADVVGAEANQREDEDAEQAWGEDEDARKR 246

Query: 184  --QDFLDCIVDLREYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLLEKRVDLLQRAEVHV 241
              ++  +CIV++RE+D+ YH+R AID ++R G WY V+        E+  D + RAE  V
Sbjct: 247  KEREPSECIVEIREHDIAYHLRVAIDLNIRVGLWYSVTSDMGQVKFERVTDRVARAEPVV 306

Query: 242  CAFDIETTKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGY 301
             A+DIETTK PLKFPD   D IMMISYM+DGQGYLI NRE V EDI+D EYTPKPE+EG 
Sbjct: 307  MAYDIETTKQPLKFPDPQTDQIMMISYMIDGQGYLITNREIVSEDIDDFEYTPKPEYEGD 366

Query: 302  FKVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQC 361
            F V N  +E  L+R WF H++E KP +  TYNGD FD+PF++ RA  HG  M  E+GF+ 
Sbjct: 367  FTVFNEPDEPALIRRWFEHIRESKPTVMATYNGDSFDFPFVDARAKIHGISMYSEIGFKI 426

Query: 362  DKNQGECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKE 421
            D N+GE + +   H+DCF WVKRDSYLPQGSQGLKAVT AKLGY+P+E++PE M  +A E
Sbjct: 427  D-NEGEYKCRACMHMDCFRWVKRDSYLPQGSQGLKAVTTAKLGYNPVELDPELMTPYAIE 485

Query: 422  KPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAY 481
            +PQ++A+YSVSDAVATYYLYM           +++  S                  V+AY
Sbjct: 486  QPQILATYSVSDAVATYYLYMK---------VSLLSNS-----------------QVEAY 519

Query: 482  KANVICPNKHQSDPEKFYRNHLLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQLL 541
             A++I PN+H+    + Y  HLL SETY+GGHVE LE+GVFR+D+PT+FK+ P A +QLL
Sbjct: 520  DAHIIMPNRHEDPHGQTYEGHLLASETYVGGHVEALEAGVFRADIPTNFKVVPEAIQQLL 579

Query: 542  NNLDRDLQYAIKVEGKMDLESVSNYDEVKNAIMEKLLRLQEEPIREECPLIYHLDVAAMY 601
            ++LD  L++++  EG + LE V NYDEVK  I + L  +++EP R + PLIYHLDVAAMY
Sbjct: 580  DDLDNALKFSLVEEGNVKLEDVENYDEVKGEITKMLETIRDEPNRFDKPLIYHLDVAAMY 639

Query: 602  PNIILTNRLQPPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYYHLKKQIE 661
            PNI+L+NRLQP S+  +  C  CD+NRP K C R+LEW WRGE F  KR +   ++  ++
Sbjct: 640  PNIMLSNRLQPDSVKDEAECAVCDYNRPDKKCDRRLEWAWRGEYFPAKRDEVNMVRYALD 699

Query: 662  SE-FVDGTNGHLSKSFLDLPKMEQQSRLKDRLKKYCQKAYKRVLDKPVTELREAGICMRE 720
             E F         + F+DL + EQ + +  RL  Y +K YK+  +  V   + A IC RE
Sbjct: 700  QEMFPPKYPNGPRRRFVDLAQAEQSALIHKRLGDYSRKVYKKTHETKVVT-KTAIICQRE 758

Query: 721  NSFYVDTVRSFRDRRYEYKGLNKVWKGKLSEAKASGNSIK-IQEAQDMVVLYDSLQLAHK 779
            NSFY+DTVR+FRDRRYEYKGL+K WK  L +A  +G +++ + EA+ M+VLYDSLQLAHK
Sbjct: 759  NSFYIDTVRAFRDRRYEYKGLHKTWKKNLDKAFENGGALQEVDEAKKMIVLYDSLQLAHK 818

Query: 780  CILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLP 839
            CILNSFYGYVMRKGARWYSMEMAG+   TGA IIQ AR L+E+IG+PLELDTDGIWC+LP
Sbjct: 819  CILNSFYGYVMRKGARWYSMEMAGITCLTGATIIQMARQLVEQIGRPLELDTDGIWCMLP 878

Query: 840  GSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIE 899
            G FPE+F FK K   KK  ISYPC MLN  V    TN QY  LVD     YE   E SI 
Sbjct: 879  GVFPEDFNFKLKG-GKKFGISYPCTMLNHLVHERFTNHQYHDLVDKEKGVYEVRKENSIF 937

Query: 900  FEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELF 959
            FE+DGPYKAMILP+SKEE  L+KKRYAVFN DG+LAELKGFE+KRRGEL++IK+FQ+++F
Sbjct: 938  FELDGPYKAMILPSSKEEDKLLKKRYAVFNFDGSLAELKGFEVKRRGELQMIKIFQSQIF 997

Query: 960  DKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLADYGEQK 1019
            DKFL GSTIEECY+AVA VA++WLD+L ++G  ++D+EL+D I+E+ +MSK+LA+Y  QK
Sbjct: 998  DKFLLGSTIEECYAAVATVADQWLDILQSKGSSLSDTELVDLIAENRSMSKTLAEYAGQK 1057

Query: 1020 SCAVTTARRLSDFLGDTMVKDKGLRCQYIVACEPQGTPVSERAVPVAIFETDAEIMKFYL 1079
            S +++TARRL++FLG+ MVKDKGL C++I++ +P G PV+ERAVPVAIF+ D  + + +L
Sbjct: 1058 STSISTARRLAEFLGEQMVKDKGLSCRFIISAKPNGAPVTERAVPVAIFDADPTVKQHFL 1117

Query: 1080 RKWCKTS--SDVGIRSIVDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLYKK 1137
            RKW K +  +D  +RSI+DW YY +RL S IQK+ITIPAA+QKV+NPVPR+ HPDWL+K+
Sbjct: 1118 RKWLKDNALTDFDMRSILDWGYYTERLGSVIQKLITIPAALQKVANPVPRIRHPDWLFKR 1177

Query: 1138 VREKEDKFRQRKLVDIFSSLKKDDFLNKTCNAETNLMDENVEDLEDFPKKRRNSVNGPRP 1197
            V  KEDKF+Q KL D+F+ ++ +                   D+EDF KK      GP+P
Sbjct: 1178 VAAKEDKFQQHKLTDMFAKMRTN------------------TDIEDFGKKS----TGPKP 1215

Query: 1198 IVRCFEVNNEQKTVKTTDQVDSLRQQLEPSEVSDQQPSSQNAIDTENIDRIVDYKGWLEL 1257
             +   +                 R++ +  E+ +  PS ++           DY G++ +
Sbjct: 1216 KIAVVK-----------------RRKAKSPEIEEIAPSPED-----------DYSGYIRV 1247

Query: 1258 KKRKW-KDNLDRRKKQKLGSLRASHQANGVSESLGDMINHKEAQRRTGVGSYFRRQETAM 1316
             ++KW K  ++R + +K G  R                          V S  R Q   +
Sbjct: 1248 MRKKWRKQRIERSRARKNGGPRMDGT----------------------VSSMIRTQSVNL 1285

Query: 1317 TRCHWQIIQLVPSSQSGVFLAWVVVEGIMVRIPITVPRLFYLNSK-----DPIVEKFPGR 1371
                W I+Q+  +++ G F  W+ ++G    + + VPR FYLN K     D   + +   
Sbjct: 1286 ASRQWDIVQIACTTRPGEFRLWLAIDGTFQSVRLRVPREFYLNFKNQPASDTFSDMYEAA 1345

Query: 1372 RVNKTLPHGRRSFNLIEVMIDEDQFRKESKKLAALLADPEVE 1413
            +V + LP G+ + NL ++ ++E  F +     ++L+ +PEV+
Sbjct: 1346 QVARVLPRGQATRNLFKIAVEESLFVEGESHFSSLINNPEVD 1387



 Score =  271 bits (692), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 171/570 (30%), Positives = 280/570 (49%), Gaps = 36/570 (6%)

Query: 1448 ILWISDDGVPDLGGTSEEDECFADEVHQPVLTYPGAYRKVSVELKIHHLSVNALLKSNQV 1507
            +LW S    PDLGG SEED    +E   P ++  G Y  V +E++I  +++NA+L+S  V
Sbjct: 1643 VLWWSPSPRPDLGG-SEEDANGGEEPTPPQISTKGVYSTVVLEMEIADMAINAVLQSALV 1701

Query: 1508 NEMEGGG----LFGFDQ---DMNSGPYNNELCGFDETTSSAPAFRVVKQLIQRCLTDAVT 1560
            NEMEG G     FG      D  +    N      + T S   F V+K ++     D   
Sbjct: 1702 NEMEGSGSGSMAFGSASHTLDEYAQGTANASVMLGDATLSIQTFTVLKSMVHSWFVDKAR 1761

Query: 1561 SG-----NVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEFRKLGATI 1615
            +      +  ++ ++   +RW+ S  S + +P L+R L  +M+K    LLAEF++LG  +
Sbjct: 1762 AHVRGVYDAPSNLVVDQFWRWISSASSCMFEPALYRFLMGLMRKTLLQLLAEFKRLGTKV 1821

Query: 1616 IFANFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLFMDQYNYG 1675
            ++A+ ++V + T K D S+A A+   L+ A  + +LF  + ++   FW+ L +MD  NYG
Sbjct: 1822 VYADLNRVFLLTSKPDASSAFAFAKYLVTAANSHDLFRHVVIDVTQFWNYLAWMDVANYG 1881

Query: 1676 GI---PARADESLDDDSQVDIVSSWNIAEYLPKEIQDHFVLVVSEFMYIPWKHAQKLAAS 1732
            G+   P+ A      +   DI   WNI  +LP  +Q  F   V++F+Y  +   +     
Sbjct: 1882 GVKIAPSVAGSQETQEGMFDISMDWNIQAFLPPMLQPKFERRVADFIYELYTAKKSATDG 1941

Query: 1733 RASLQEGSSCTPSITVAAAENFESHIVQYVKGEISSYFTGKLLSIVR--DAIHHMKKMNN 1790
            R  L+         T  A +  +    +     IS+  T  LL  V      H   + N 
Sbjct: 1942 RGPLRPMFDLNVD-TSGAVDPAKEKAEKAAAKAISTTLTRHLLEDVTKIKKRHAQAQANG 2000

Query: 1791 DQHNSPGV--MQTAANIHKVDAPLEFIKHVCAAFALDQNVQHDVLVMRKNLLKYVRVREF 1848
            D+  +     +  A N+ + +A L FIK VC  ++L  ++   V V+R+NLL  V VREF
Sbjct: 2001 DEDETMAFPHLPGARNVKETNAALAFIKAVCEVYSLASDLSVSVQVLRRNLLDLVGVREF 2060

Query: 1849 APEAEFRDPCPSFILPNVICSYCNDCRDLDLCRDMALLA-------------QDWHCAMP 1895
            + +A+FR+P  S ++P V C  CN  RD+DL RD   L              + W C   
Sbjct: 2061 SSDAQFRNPGESLVVPMVSCVRCNAIRDVDLGRDPDCLPSVTERGHIEPAPCKFWTCH-- 2118

Query: 1896 QCGQPYDREVMENALLQIVRQRERLYHLQDLVCIRCNQVKAAHLAEQCACAGSFRCKEDA 1955
            +CG  Y+R+ +E  L++ V +    +  QD+VC++C Q+K  +LA+ C C GSF+     
Sbjct: 2119 KCGAGYERDAIEFPLIEHVNRLITRWQTQDVVCLKCGQIKEDNLAQTCRCGGSFKPSLHR 2178

Query: 1956 SDFRSKMQIFLNIANRQGFQLLQECTSWIL 1985
             D  +K+ +  +++     +L +E    +L
Sbjct: 2179 GDITAKLNMLRSVSEYHNLELTKEYVGAVL 2208


>gi|401882508|gb|EJT46764.1| DNA polymerase epsilon, catalytic subunit a [Trichosporon asahii var.
            asahii CBS 2479]
          Length = 2211

 Score = 1275 bits (3299), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 657/1422 (46%), Positives = 898/1422 (63%), Gaps = 134/1422 (9%)

Query: 25   EELEAKLGYDLFSEG----DKRLGWLLTFASSSLEDEDTRKVYSCIDLYFVSQDGSTFKS 80
            + ++  LG+  F  G    + R GWL+   S+ LE +      + +D YF+  DGS FK+
Sbjct: 67   DAIDEALGFPRFESGRVGGESREGWLVNMHSTLLESDTHAGGLAAVDYYFIQDDGSMFKA 126

Query: 81   KYKFRPYFYAATKEKMEMDVEAYLRRRYESQIADIEILEKEDLDLKNHLSGLHKSYLKIS 140
                 PYFY   +   E  VE +L +R+E  +      +K DL + NHL       LK+ 
Sbjct: 127  TIPHEPYFYLTCRAGTETMVEEWLVKRFEGLVVRTAREKKWDLAVPNHLLSAPPVLLKLF 186

Query: 141  FDTVQQLMDVKKDLLHVVERNQAKFDAAEAYESILTGKREQRP----------------- 183
            F     L  V+++LL +   N +KF A +AY  ++  +  QR                  
Sbjct: 187  FHNTADLQAVRRELLPLAIANASKFTAVDAYADVVGAEANQREDEDAEQAWGEDEDARKR 246

Query: 184  --QDFLDCIVDLREYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLLEKRVDLLQRAEVHV 241
              ++  +CIV++RE+D+ YH+R AID ++R G WY V+        E+  D + RAE  V
Sbjct: 247  KEREPSECIVEIREHDIAYHLRVAIDLNIRVGLWYSVTSDMGQVKFERVTDRVARAEPVV 306

Query: 242  CAFDIETTKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGY 301
             A+DIETTK PLKFPD   D IMMISYM+DGQGYLI NRE V EDI+D EYTPKPE+EG 
Sbjct: 307  MAYDIETTKQPLKFPDPQTDQIMMISYMIDGQGYLITNREIVSEDIDDFEYTPKPEYEGD 366

Query: 302  FKVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQC 361
            F V N  +E  L+R WF H++E KP +  TYNGD FD+PF++ RA  HG  M  E+GF+ 
Sbjct: 367  FTVFNEPDEPALIRRWFEHIRESKPTVMATYNGDSFDFPFVDARAKIHGISMYSEIGFKI 426

Query: 362  DKNQGECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKE 421
            D N+GE + +   H+DCF WVKRDSYLPQGSQGLKAVT AKLGY+P+E++PE M  +A E
Sbjct: 427  D-NEGEYKCRACMHMDCFRWVKRDSYLPQGSQGLKAVTTAKLGYNPVELDPELMTPYAIE 485

Query: 422  KPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAY 481
            +PQ++A+YSVSDAVATYYLYM           +++  S                  V+AY
Sbjct: 486  QPQILATYSVSDAVATYYLYMK---------VSLLSNS-----------------QVEAY 519

Query: 482  KANVICPNKHQSDPEKFYRNHLLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQLL 541
             A++I PN+H+    + Y  HLL SETY+GGHVE LE+GVFR+D+PT+F++ P A +QLL
Sbjct: 520  DAHIIMPNRHEDPHGQTYEGHLLASETYVGGHVEALEAGVFRADIPTNFRVVPEAIQQLL 579

Query: 542  NNLDRDLQYAIKVEGKMDLESVSNYDEVKNAIMEKLLRLQEEPIREECPLIYHLDVAAMY 601
            ++LD  L++++  EG + LE V NYDEVK  I + L  +++EP R + PLIYHLDVAAMY
Sbjct: 580  DDLDNALKFSLVEEGNVKLEDVENYDEVKGEITKMLETIRDEPNRFDKPLIYHLDVAAMY 639

Query: 602  PNIILTNRLQPPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYYHLKKQIE 661
            PNI+L+NRLQP S+  +  C  CD+NRP K C R+LEW WRGE F  KR +   ++  ++
Sbjct: 640  PNIMLSNRLQPDSVKDEAECAVCDYNRPDKKCDRRLEWAWRGEYFPAKRDEVNMVRYALD 699

Query: 662  SE-FVDGTNGHLSKSFLDLPKMEQQSRLKDRLKKYCQKAYKRVLDKPVTELREAGICMRE 720
             E F         + F+DL + EQ + +  RL  Y +K YK+  +  V   + A IC RE
Sbjct: 700  QEMFPPKYPNGPRRRFVDLAQAEQSALIHKRLGDYSRKVYKKTHETKVVT-KTAIICQRE 758

Query: 721  NSFYVDTVRSFRDRRYEYKGLNKVWKGKLSEAKASGNSIK-IQEAQDMVVLYDSLQLAHK 779
            NSFY+DTVR+FRDRRYEYKGL+K WK  L +A  +G +++ + EA+ M+VLYDSLQLAHK
Sbjct: 759  NSFYIDTVRAFRDRRYEYKGLHKTWKKNLDKAFENGGALQEVDEAKKMIVLYDSLQLAHK 818

Query: 780  CILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLP 839
            CILNSFYGYVMRKGARWYSMEMAG+   TGA IIQ AR L+E+IG+PLELDTDGIWC+LP
Sbjct: 819  CILNSFYGYVMRKGARWYSMEMAGITCLTGATIIQMARQLVEQIGRPLELDTDGIWCMLP 878

Query: 840  GSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIE 899
            G FPE+F FK K   KK  ISYPC MLN  V    TN QY  LVD     YE   E SI 
Sbjct: 879  GVFPEDFNFKLKG-GKKFGISYPCTMLNHLVHERFTNHQYHDLVDKEKGVYEVRKENSIF 937

Query: 900  FEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELF 959
            FE+DGPYKAMILP+SKEE  L+KKRYAVFN DG+LAELKGFE+KRRGEL++IK+FQ+++F
Sbjct: 938  FELDGPYKAMILPSSKEEDKLLKKRYAVFNFDGSLAELKGFEVKRRGELQMIKIFQSQIF 997

Query: 960  DKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLADYGEQK 1019
            DKFL GSTIEECY+AVA VA++WLD+L ++G  ++D+EL+D I+E+ +MSK+LA+Y  QK
Sbjct: 998  DKFLLGSTIEECYAAVATVADQWLDILQSKGSSLSDTELVDLIAENRSMSKTLAEYAGQK 1057

Query: 1020 SCAVTTARRLSDFLGDTMVKDKGLRCQYIVACEPQGTPVSERAVPVAIFETDAEIMKFYL 1079
            S +++TARRL++FLG+ MVKDKGL C++I++ +P G PV+ERAVPVAIF+ D  + + +L
Sbjct: 1058 STSISTARRLAEFLGEQMVKDKGLSCRFIISAKPNGAPVTERAVPVAIFDADPTVKQHFL 1117

Query: 1080 RKWCKTS--SDVGIRSIVDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLYKK 1137
            RKW K +  +D  +RSI+DW YY +RL S IQK+ITIPAA+QKV+NPVPR+ HPDWL+K+
Sbjct: 1118 RKWLKDNALTDFDMRSILDWGYYTERLGSVIQKLITIPAALQKVANPVPRIRHPDWLFKR 1177

Query: 1138 VREKEDKFRQRKLVDIFSSLKKDDFLNKTCNAETNLMDENVEDLEDFPKKRRNSVNGPRP 1197
            V  KEDKF+Q KL D+F+ ++ +                   D+EDF KK      GP+P
Sbjct: 1178 VAAKEDKFQQHKLTDMFAKMRTN------------------TDIEDFGKKS----TGPKP 1215

Query: 1198 IVRCFEVNNEQKTVKTTDQVDSLRQQLEPSEVSDQQPSSQNAIDTENIDRIVDYKGWLEL 1257
             +   +                 R++ +  E+ +  PS ++           DY G++ +
Sbjct: 1216 KIAVVK-----------------RRKAKSPEIEEIAPSPED-----------DYSGYIRV 1247

Query: 1258 KKRKW-KDNLDRRKKQKLGSLRASHQANGVSESLGDMINHKEAQRRTGVGSYFRRQETAM 1316
             ++KW K  ++R + +K G  R                          V S  R Q   +
Sbjct: 1248 MRKKWRKQRIERSRARKNGGPRMDGT----------------------VSSMIRTQSVNL 1285

Query: 1317 TRCHWQIIQLVPSSQSGVFLAWVVVEGIMVRIPITVPRLFYLNSK-----DPIVEKFPGR 1371
                W I+Q+  +++ G F  W+ ++G    + + VPR FYLN K     D   + +   
Sbjct: 1286 ASRQWDIVQIACTTRPGEFRLWLAIDGTFQSVRLRVPREFYLNFKNQPASDTFSDMYEAA 1345

Query: 1372 RVNKTLPHGRRSFNLIEVMIDEDQFRKESKKLAALLADPEVE 1413
            +V + LP G+ + NL ++ ++E  F +     ++L+ +PEV+
Sbjct: 1346 QVARVLPRGQATRNLFKIAVEESLFVEGESHFSSLINNPEVD 1387



 Score =  271 bits (693), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 171/570 (30%), Positives = 281/570 (49%), Gaps = 36/570 (6%)

Query: 1448 ILWISDDGVPDLGGTSEEDECFADEVHQPVLTYPGAYRKVSVELKIHHLSVNALLKSNQV 1507
            +LW S    PDLGG SEED    +E   P ++  G Y  V +E++I  +++NA+L+S  V
Sbjct: 1643 VLWWSPSPRPDLGG-SEEDANGGEEPTPPQISTKGVYSTVVLEMEIADMAINAVLQSALV 1701

Query: 1508 NEMEGGG----LFGFDQ---DMNSGPYNNELCGFDETTSSAPAFRVVKQLIQRCLTDAVT 1560
            NEMEG G     FG      D  +    N      + T S   F V+K +++    D   
Sbjct: 1702 NEMEGSGSGSMAFGSASHTLDEYAQGTANASVMLGDATLSIQTFTVLKSMVRSWFVDKAR 1761

Query: 1561 SG-----NVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEFRKLGATI 1615
            +      +  ++ ++   +RW+ S  S + +P L+R L  +M+K    LLAEF++LG  +
Sbjct: 1762 AHVRGVYDAPSNLVVDQFWRWISSASSCMFEPALYRFLMGLMRKTLLQLLAEFKRLGTKV 1821

Query: 1616 IFANFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLFMDQYNYG 1675
            ++A+ ++V + T K D S+A A+   L+ A  + +LF  + ++   FW+ L +MD  NYG
Sbjct: 1822 VYADLNRVFLLTSKPDASSAFAFAKYLVTAANSHDLFRHVVIDVTQFWNYLAWMDVANYG 1881

Query: 1676 GI---PARADESLDDDSQVDIVSSWNIAEYLPKEIQDHFVLVVSEFMYIPWKHAQKLAAS 1732
            G+   P+ A      +   DI   WNI  +LP  +Q  F   V++F+Y  +   +     
Sbjct: 1882 GVKIAPSVAGSQETQEGMFDISMDWNIQAFLPPMLQPKFERRVADFIYELYTAKKSATDG 1941

Query: 1733 RASLQEGSSCTPSITVAAAENFESHIVQYVKGEISSYFTGKLLSIVR--DAIHHMKKMNN 1790
            R  L+         T  A +  +    +     IS+  T  LL  V      H   + N 
Sbjct: 1942 RGPLRPMFDLNVD-TSGAVDPAKEKAEKAAAKAISTTLTRHLLEDVTKIKKRHAQAQANG 2000

Query: 1791 DQHNSPGV--MQTAANIHKVDAPLEFIKHVCAAFALDQNVQHDVLVMRKNLLKYVRVREF 1848
            D+  +     +  A N+ + +A L FIK VC  ++L  ++   V V+R+NLL  V VREF
Sbjct: 2001 DEDETMAFPHLPGARNVKETNAALAFIKAVCEVYSLASDLSVSVQVLRRNLLDLVGVREF 2060

Query: 1849 APEAEFRDPCPSFILPNVICSYCNDCRDLDLCRDMALLA-------------QDWHCAMP 1895
            + +A+FR+P  S ++P V C  CN  RD+DL RD   L              + W C   
Sbjct: 2061 SSDAQFRNPGESLVVPMVSCVRCNAIRDVDLGRDPDCLPSVTERGHIEPAPCKFWTCH-- 2118

Query: 1896 QCGQPYDREVMENALLQIVRQRERLYHLQDLVCIRCNQVKAAHLAEQCACAGSFRCKEDA 1955
            +CG  Y+R+ +E  L++ V +    +  QD+VC++C Q+K  +LA+ C C GSF+     
Sbjct: 2119 KCGAGYERDAIEFPLIEHVNRLITRWQTQDVVCLKCGQIKEDNLAQTCRCGGSFKPSLHR 2178

Query: 1956 SDFRSKMQIFLNIANRQGFQLLQECTSWIL 1985
             D  +K+ +  +++     +L +E    +L
Sbjct: 2179 GDITAKLNMLRSVSEYHNLELTKEYVGAVL 2208


>gi|367012415|ref|XP_003680708.1| hypothetical protein TDEL_0C06080 [Torulaspora delbrueckii]
 gi|359748367|emb|CCE91497.1| hypothetical protein TDEL_0C06080 [Torulaspora delbrueckii]
          Length = 2211

 Score = 1274 bits (3297), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 654/1330 (49%), Positives = 880/1330 (66%), Gaps = 73/1330 (5%)

Query: 66   IDLYFVSQDGSTFKSKYKFRPYFYAATKEKMEM-DVEAYLRRRYESQIADIEILEKEDLD 124
            +D YF+ ++G +FKS   + PYF+    +   + +VE Y+++  E+ +  + I+EK+DL 
Sbjct: 105  VDFYFLDEEGGSFKSTITYDPYFFIKCSDPSRVAEVEEYIKKYLETCLKSVTIVEKDDLS 164

Query: 125  LKNHLSGLHKSYLKISFDTVQQLMDVKKDLLHVVERNQAKFDAAEAYESILTGKREQRPQ 184
            L NHL GL ++ +K++F    +L + +K L  ++  N+        Y   + G  +    
Sbjct: 165  LDNHLLGLKRTLIKLTFINSNKLFEARKLLRPILAHNENNNTQKNLYSGQMMGNPKT--- 221

Query: 185  DFLDCIVDLREYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLLEKRVDLLQRAEVHVCAF 244
            D    I D+REYDVPYH+R +ID  +R G+WY V+      L EK    +  AE  V AF
Sbjct: 222  DVKSLIEDIREYDVPYHVRVSIDKGIRVGKWYKVTSGGFFELKEK----VAFAEPVVLAF 277

Query: 245  DIETTKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKV 304
            DIETTK PLKFPD+  D +MMISYM+DG+G+LI NRE + EDIED EY+PKPE+ G F +
Sbjct: 278  DIETTKAPLKFPDSAIDQVMMISYMIDGEGFLITNREIISEDIEDFEYSPKPEYLGQFTI 337

Query: 305  TNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDKN 364
             N  +E+ LL+ +F H+++V+P +  T+NGD+FDWPF+E R+  HG  M EE+GF  D +
Sbjct: 338  FNEVDELALLQRFFEHIRDVRPTVISTFNGDFFDWPFIENRSKIHGLDMFEEIGFAPDSD 397

Query: 365  QGECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQ 424
             GE ++ +  H+DCF WVKRDSYLPQGSQGLKAVT+AKLGY+P+E++PE M  +A EKPQ
Sbjct: 398  -GEYKSSYCSHMDCFRWVKRDSYLPQGSQGLKAVTQAKLGYNPIELDPELMTPYAFEKPQ 456

Query: 425  MMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKAN 484
             ++ YSVSDAVATYYLYM YVHPFIFSL TIIP++PDE LRKG+GTLCEMLLMVQAY  N
Sbjct: 457  QLSEYSVSDAVATYYLYMKYVHPFIFSLCTIIPLNPDETLRKGTGTLCEMLLMVQAYDGN 516

Query: 485  VICPNKHQSDPEKFYRNHLLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQLLNNL 544
            ++ PNK+    E+FY  HLLESETY+GGHVE LE+GVFRSD+P+ FK+DP+  ++LL++L
Sbjct: 517  IMLPNKYTDPIERFYDGHLLESETYVGGHVESLEAGVFRSDIPSDFKVDPTVIDELLDDL 576

Query: 545  DRDLQYAIKVEGKMDLESVSNYDEVKNAIMEKLLRLQEEPIREECPLIYHLDVAAMYPNI 604
               L++ ++VE    +E V+N+ ++ + I  KL  L+ +  R E PLIYH+DVA+MYPNI
Sbjct: 577  PHALKFCVEVENNSKIEDVTNFQDIMDEITVKLKDLKVKNERSELPLIYHVDVASMYPNI 636

Query: 605  ILTNRLQPPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYYHLKKQIESEF 664
            + TNRLQP S+ ++  C +CDFNRPGKTC R+L+W WRGE F  K  +Y  +K+ +++E 
Sbjct: 637  MTTNRLQPDSMKSERDCASCDFNRPGKTCDRRLKWSWRGEFFPAKMDEYNMVKRALQNET 696

Query: 665  VDGTNGHLSKSFL---DLPKMEQQSRLKDRLKKYCQKAYKRVLDKPVTELREAGICMREN 721
                N    K FL   +L   EQ + +K RL  Y +K Y RV    V E RE+ +C REN
Sbjct: 697  FPNKNRFSKKKFLTFDELSYAEQVTHIKKRLTDYSRKVYHRVKVSEVVE-RESIVCQREN 755

Query: 722  SFYVDTVRSFRDRRYEYKGLNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHKCI 781
             FY DTVRSFRDRRYE+KGL K WKGKL+   +S    K  EA+ M+VLYDSLQLAHK I
Sbjct: 756  PFYADTVRSFRDRRYEFKGLAKTWKGKLAAIPSSDKHAK-DEAKKMIVLYDSLQLAHKVI 814

Query: 782  LNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLPGS 841
            LNSFYGYVMRKG+RWYSMEMAG+   TGA IIQ AR L+E+IG+PLELDTDGIWC++P S
Sbjct: 815  LNSFYGYVMRKGSRWYSMEMAGITCLTGATIIQMARALVERIGRPLELDTDGIWCIVPKS 874

Query: 842  FPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEFE 901
            FPEN++F+  +  K+L +SYPC MLN  V +  TN QYQ L DPV   Y+TH E SI FE
Sbjct: 875  FPENYSFQMNN-GKRLFLSYPCSMLNYKVHQKFTNTQYQELSDPVRHKYKTHDENSIFFE 933

Query: 902  VDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDK 961
            VDGPY+AMILP SKEEG  IKKRYAVFN+DG+LAELKGFE+KRRGEL+LIK FQ++LF  
Sbjct: 934  VDGPYRAMILPTSKEEGKGIKKRYAVFNEDGSLAELKGFELKRRGELQLIKNFQSDLFKV 993

Query: 962  FLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLADYGEQKSC 1021
            FL G  ++ CY AVAAVANRW D+LD +G  + D +LI+ I E+ +MSK+L +Y  QKS 
Sbjct: 994  FLEGDDLQSCYGAVAAVANRWFDILDTKGAMLEDEDLIELICENRSMSKTLKEYEGQKST 1053

Query: 1022 AVTTARRLSDFLGDTMVKDKGLRCQYIVACEPQGTPVSERAVPVAIFETDAEIMKFYLRK 1081
            ++TTA+RL +FLG+ MVKDKGL+C+YI++  P   PV+ERA+PVAIF  +  + + +LR+
Sbjct: 1054 SITTAKRLGEFLGEEMVKDKGLQCKYIISSLPPNAPVTERAIPVAIFSAEISVKRSFLRR 1113

Query: 1082 WCKTSS--DVGIRSIVDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLYKKVR 1139
            W   +S  D   R+I+DW YYK+R++S IQKIITIPAA+Q + NPVPRV HP WL K++ 
Sbjct: 1114 WTLDTSLEDFDPRAIIDWDYYKERVASVIQKIITIPAALQNIPNPVPRVEHPVWLKKRLA 1173

Query: 1140 EKEDKFRQRKLVDIFSSLKKDDFLNKTCNAETNLMDENVEDLEDFPKKRRNSVNGPRPIV 1199
             KEDKF+Q        SL K  FL K   A  +   +++EDL       +N+ +  +   
Sbjct: 1174 TKEDKFKQ-------DSLSK--FLVKASQAPASGQIKDIEDL------FKNNADITKETS 1218

Query: 1200 RCFEVNNEQKTVKTTDQVDSLRQQLEPSEV-SDQQPSSQNAIDTENIDRIVDYKGWLELK 1258
            +  +V++ +   K        R++ +P EV S   PS   ++D        DY  WLE +
Sbjct: 1219 KIAKVSSRKDRNK--------RKRQQPPEVESLVLPSVMPSMDD-------DYVAWLEYQ 1263

Query: 1259 KRKWK-DNLDR-RKKQKLGSLRASHQANGVSESLGDMINHKEAQRRTGVGSYFRRQETAM 1316
            K KWK  + DR R+ Q  GS   S                     R+ +G   R+Q    
Sbjct: 1264 KIKWKIQSRDRIRRAQLFGSTGNSAD-------------------RSALGGLMRKQAETY 1304

Query: 1317 TRCHWQIIQLVPSSQSGVFLAWVVVEGIMVRIPITVPRLFYLNSKDPIVEKFPGRRV--- 1373
                W+++Q   S+Q G    +V ++G +  +   VP+  Y+N +       P   V   
Sbjct: 1305 ANSTWEVLQYRISAQPGTLDVFVSIQGQIQVLKFKVPKTVYVNFRSIPHVSTPEHLVMEP 1364

Query: 1374 -NKTLPHGRR 1382
             N TLP+  R
Sbjct: 1365 SNATLPNNSR 1374



 Score =  201 bits (510), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 138/543 (25%), Positives = 260/543 (47%), Gaps = 19/543 (3%)

Query: 1446 AHILWISDDG-VPDLGGTSEEDEC----FADEVHQPVLTYPGAYRKVSVELKIHHLSVNA 1500
             ++LW +D+  +PD GG   + +       +++  P +  P  Y +V +E+ + +L++NA
Sbjct: 1670 GYVLWWNDNSPLPDHGGAQRDFDLNTSWLMNDLAFPEVNNPAVYDQVVLEIGVGNLTINA 1729

Query: 1501 LLKSNQVNEMEGGGLFGFD--QDMNSGPYNNELCGFDETTSSAPAFRVVKQLIQRCLTDA 1558
            +L S  +NE EGG   G D    +NSG +N+     ++  S   +  V++ L++    D+
Sbjct: 1730 VLGSALINEAEGGDPMGMDVSNSLNSGDHNSGDNLVNDAFSGG-SLLVLRNLLKEWW-DS 1787

Query: 1559 VTSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEFRKLGATIIFA 1618
              + N  +D ++     W+ +P SKL DP L   +  + +K    L+ EF  LG+++ +A
Sbjct: 1788 ALANNSTSDLLINSFVNWIQNPDSKLFDPSLRYHVRNLTKKSLLQLMNEFHNLGSSVTYA 1847

Query: 1619 NFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLFMDQYNYGGIP 1678
            + +K+++ T K+      AY   ++KA++   +F +++L    +W  L++MD++N+GG+ 
Sbjct: 1848 DRNKILVKTNKYSPETCYAYGQYIIKAVRKNLVFTYLDLRIEKYWDLLIWMDKHNFGGL- 1906

Query: 1679 ARADESLDDDSQVDIVSSWNIAEYLPKEIQDHFVLVVSEFMYIPWKHAQKLAASRASLQE 1738
            A  D    +   V   S W+I E+LP   +  F   +  F+    K  +    S    Q 
Sbjct: 1907 ACTDIQEKEVQDVRAFSKWHIKEFLPLIYKPEFDDWMMIFLDSMVKTKRNYLQSTEGTQR 1966

Query: 1739 GSSCTPSITVAAAENFESHIVQYVKGEISSYFTGKLLSIVRDAIHHMKKMNND-QHNSPG 1797
             +   P  T    + F     Q    + +  F+  L++ +     + KK   D ++ +  
Sbjct: 1967 LTQILPIKT--NKDGFSDDDDQGPLTDFTRMFSAPLINRIEKLYQNEKKFILDPKYAAEY 2024

Query: 1798 VMQTAANIH-KVDAP-LEFIKHVCAAFALDQNVQHDVLVMRKNLLKYVRVREFAPEAEFR 1855
                    H  + AP LE +K++C    L ++   +V  +RK LLK   VREF   AEF 
Sbjct: 2025 TFPILPGSHLSMKAPLLELVKYLCQVMLLSKSNLLEVRELRKELLKVFEVREFDTRAEFI 2084

Query: 1856 DPCPSFILPNVICSYCNDCRDLDLCRDMALLAQDWHCAMPQCGQPYDREVMENALLQIVR 1915
            +P  S ++   +C +C    D+D C+D          A P C + ++R +++  ++Q + 
Sbjct: 2085 NPSTSLVVNGFLCEFCFFTTDIDFCKDDPTTI----FACPSCHKKFNRVLLQEHMIQKLY 2140

Query: 1916 QRERLYHLQDLVCIRCNQVKAAHLAEQCACAGSFRCKEDASDFRSKMQIFLNIANRQGFQ 1975
                 Y  QDL C RC ++K  +++  C+C+GS+      +    K  ++  +     F 
Sbjct: 2141 ADVESYLTQDLQCSRCRRMKQDNMSTYCSCSGSWVGSVSKNSLIEKALVYRQVTEYYDFD 2200

Query: 1976 LLQ 1978
            LL+
Sbjct: 2201 LLR 2203


>gi|260950575|ref|XP_002619584.1| hypothetical protein CLUG_00743 [Clavispora lusitaniae ATCC 42720]
 gi|238847156|gb|EEQ36620.1| hypothetical protein CLUG_00743 [Clavispora lusitaniae ATCC 42720]
          Length = 1337

 Score = 1272 bits (3292), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 656/1301 (50%), Positives = 881/1301 (67%), Gaps = 74/1301 (5%)

Query: 25   EELEAKLGYDLFSEGD-----KRLGWLLTFASSSLEDEDTRKVYSCIDLYFVSQDGSTFK 79
            ++L+A +G++ F +G+      R GWL+   ++++  +D    YS +D YF+ Q+G +FK
Sbjct: 63   DQLDAMMGFERFDQGEYDGSKPRKGWLINMHATTVPTDDYLAGYSGVDFYFLDQEGGSFK 122

Query: 80   SKYKFRPYFYAATKEKMEMDVEAYLRRRYES-QIADIEILEKEDLDLKNHLSGLHKSYLK 138
            +  ++ PYF+       E DVE  L+R  E   +  I    KEDL L NHL GL ++ +K
Sbjct: 123  ATLQYDPYFFLMVVPGKEPDVEESLKRLLEDFHVKSISRELKEDLSLPNHLVGLKRTLIK 182

Query: 139  ISFDTVQQLMDVKKDLLHVVERNQAKFDA---------------AEAYESILTGKREQR- 182
            ++F     L+  ++ L  +++ NQAK D                + A +   + + +Q  
Sbjct: 183  LTFHNTTDLIGARRLLNPIIKENQAKRDTRDVFRIYNFNNPSGISSATDGFQSNESKQDA 242

Query: 183  ---PQDFLDCIVDLREYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLLEKRVDLLQRAEV 239
               P  F+D   D+REYDVPYH+R +IDN+VR G+WYDV         E+  + +  A+ 
Sbjct: 243  STDPTTFID---DIREYDVPYHVRVSIDNNVRVGKWYDVYAKHGKITFEEDKEKIAFADP 299

Query: 240  HVCAFDIETTKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFE 299
             V AFDIETTK PLKFPDA  D IMMISYM+DG+G+LI NRE + EDIED EYTPKPE+ 
Sbjct: 300  VVLAFDIETTKAPLKFPDAKVDQIMMISYMIDGEGFLITNREIISEDIEDFEYTPKPEYP 359

Query: 300  GYFKVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGF 359
            G F + N  +E  +L  +F H+++V+P +  T+NGD+FDWPF+E R   HG  +  E+GF
Sbjct: 360  GNFTIFNEPDEKHVLMRFFEHIRDVRPTVIATFNGDFFDWPFVENRTNFHGMDLFNEIGF 419

Query: 360  QCDKNQGECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFA 419
              D ++ E ++K+  H+DC+ WVKRDSYLPQGSQGLKAVT AKLGY+PLE++PE M  +A
Sbjct: 420  AKD-DEDEYKSKYCVHMDCYRWVKRDSYLPQGSQGLKAVTTAKLGYNPLELDPELMTPYA 478

Query: 420  KEKPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQ 479
             E+PQ+++ YSVSDAVATYYLY  YVHPFIFSL TI+P++PDEVLRKG+GTLCEMLL VQ
Sbjct: 479  YERPQILSEYSVSDAVATYYLYYKYVHPFIFSLCTILPLNPDEVLRKGTGTLCEMLLSVQ 538

Query: 480  AYKANVICPNKHQSDPEKFYRNHLLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQ 539
            AY+ N++ PNK+    E+FY  HLLESETY+GGHVE LE+GVFRSD+ T FK+DP+A +Q
Sbjct: 539  AYEGNILLPNKYTDPIERFYEGHLLESETYVGGHVESLEAGVFRSDIATDFKIDPTAIDQ 598

Query: 540  LLNNLDRDLQYAIKVEGKMDLESVSNYDEVKNAIMEKLLRLQEEPIREECPLIYHLDVAA 599
            LL +L   L++ I+VE    +E V N++EV  AI ++L  L++ P+R E PLIYH+DVA+
Sbjct: 599  LLRDLRETLKFTIEVENHKSMEDVENFEEVYIAIKKQLESLRDSPVRNETPLIYHVDVAS 658

Query: 600  MYPNIILTNRLQPPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYYHLKKQ 659
            MYPNI+ + RLQP S+ ++E C ACDFNRPGK C R++ W WRGE +  ++++Y  +K+ 
Sbjct: 659  MYPNIMTSYRLQPDSMKSEEDCAACDFNRPGKNCDRRMTWAWRGEFYPAEQNEYGMVKRT 718

Query: 660  IESEFVDGTNGHL-SKSFLDLPKMEQQSRLKDRLKKYCQKAYKRVLDKPVTELREAGICM 718
            +++E   GT   L ++SF +LP  EQ S +K R+  Y +K Y R+  +  T  REA +C 
Sbjct: 719  LQNETFPGTRPWLPARSFDELPYAEQASLIKKRISDYSRKVYNRI-KQTKTVNREAIVCQ 777

Query: 719  RENSFYVDTVRSFRDRRYEYKGLNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAH 778
            REN FYVDTVR FRDRRYE+K L KVWKGK S+ K    SI   EA  MV+LYDSLQLAH
Sbjct: 778  RENPFYVDTVRGFRDRRYEFKTLAKVWKGKASKCK---ESISKDEANKMVILYDSLQLAH 834

Query: 779  KCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVL 838
            K ILNSFYGYVMRKG+RWYSMEMAG+   TGA IIQ AR L+E++G+PLELDTDGIWC+L
Sbjct: 835  KVILNSFYGYVMRKGSRWYSMEMAGITCLTGATIIQMARALVERLGRPLELDTDGIWCIL 894

Query: 839  PGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSI 898
            P SFPENF  K KD  KK+ + YPC MLN  V +  TN QYQ L+D  +  Y+T SE SI
Sbjct: 895  PKSFPENFNLKCKD-GKKIFVEYPCSMLNYLVHQQFTNHQYQDLIDADTFKYKTRSENSI 953

Query: 899  EFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAEL 958
             FEVDGPYKAM+LP SKEEG  +KKRYAVFN DG+LAELKGFE+KRRGEL+LIK FQ+++
Sbjct: 954  FFEVDGPYKAMVLPTSKEEGKGLKKRYAVFNKDGSLAELKGFELKRRGELQLIKNFQSDI 1013

Query: 959  FDKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLADYGEQ 1018
            F  FL G ++E CY AV+ VAN WLD+L+ +G  + D +LI+ I E+ +MSK+L++Y  Q
Sbjct: 1014 FKLFLEGDSLESCYQAVSTVANNWLDVLETKGGMLEDEDLIELICENRSMSKALSEYEGQ 1073

Query: 1019 KSCAVTTARRLSDFLGDTMVKDKGLRCQYIVACEPQGTPVSERAVPVAIFETDAEIMKFY 1078
            KS ++TTA+RL +FLG+ MVKD GL C+YI++ +P  +PV+ERA+PV+IF   +E  + Y
Sbjct: 1074 KSTSITTAKRLGEFLGEEMVKDAGLACKYIISAKPLESPVTERAIPVSIFS--SEHKEIY 1131

Query: 1079 LRKWCKTSS--DVGIRSIVDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLYK 1136
            L+KW K  S  D   RS++DW YY++RL+S IQKIITIPAA+Q V NPVPRV HPDWL K
Sbjct: 1132 LKKWLKDPSLTDFDPRSVIDWDYYRERLASVIQKIITIPAALQNVKNPVPRVSHPDWLQK 1191

Query: 1137 KVREKEDKFRQRKLVDIFSSLKKDDFLNKTCNAETNLMDENVEDLEDFPKKRRNSVNGPR 1196
            ++R KEDKF+Q       +SL K  F NK  N E     + ++D+EDF       V+   
Sbjct: 1192 RIRVKEDKFQQ-------TSLSK--FFNKASNEEVKT--KAIKDIEDF-----GEVDEGV 1235

Query: 1197 PIVRCFEVNNEQKTVKTTDQVDSLRQQLEPSEVSDQQPSSQNAIDTENIDRIVDYKGWLE 1256
            P  +  +V     TVK     ++ R Q E  E +    +S     TE      DY  +L+
Sbjct: 1236 PKTKLGKV-----TVKKRKMREAQRLQAEEDEKAVAILNSPCPSMTE------DYVSFLQ 1284

Query: 1257 LKKRKWK---DNLDRRKKQKLGSLRASHQANGVSESLGDMI 1294
             +K KW+    N DRRKK    ++ +S+++     S+G M 
Sbjct: 1285 YQKAKWRVQSKNRDRRKKLFGENVDSSYRS-----SVGSMF 1320


>gi|366999610|ref|XP_003684541.1| hypothetical protein TPHA_0B04380 [Tetrapisispora phaffii CBS 4417]
 gi|357522837|emb|CCE62107.1| hypothetical protein TPHA_0B04380 [Tetrapisispora phaffii CBS 4417]
          Length = 2215

 Score = 1272 bits (3292), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 664/1447 (45%), Positives = 925/1447 (63%), Gaps = 99/1447 (6%)

Query: 8    RQDGRRTKKQKLIRSAE-EELEAKLGYDL-----FSEGDK---------RLGWLLTFASS 52
            +++G     Q+L++S + +E++  +G++      FS   K         R+GWL+    +
Sbjct: 27   QRNGFALSAQQLLQSGKVDEIDTMMGFERYIPPQFSGSIKNTKLQNIPGRVGWLVNMHPT 86

Query: 53   SLEDED--------TRKVYSCIDLYFVSQDGSTFKSKYKFRPYFYAATKEKMEM-DVEAY 103
             L  +         +    + +D YF+ ++G +FKS   + PYF+    +   + DVE +
Sbjct: 87   VLSQDSIYSSSGSNSNVGVAGVDFYFLDEEGGSFKSSVVYDPYFFITVTDDSRINDVEEF 146

Query: 104  LRRRYESQIADIEILEKEDLDLKNHLSGLHKSYLKISFDTVQQLMDVKKDLLHVVERNQA 163
            L++  ES + +I +L K+DL   NHL GL K+ +K+SF    QL + + +LL  + R+ A
Sbjct: 147  LKKYLESCLKNISVLIKDDLAKDNHLIGLKKTLIKLSFVNSNQLFEAR-NLLRPILRDNA 205

Query: 164  KFDAAEAYESILTGKREQRPQDFLDCIVDLREYDVPYHIRFAIDNDVRCGQWYDVSISST 223
                     +          Q  ++   D+REYDVPYH+R +ID D+R G+WY   I+S 
Sbjct: 206  NNRMQRNIYNQNNNNTAVEAQKVIE---DIREYDVPYHVRVSIDKDIRVGKWY--KITSQ 260

Query: 224  GPLLEKRVDLLQRAEVHVCAFDIETTKLPLKFPDADYDIIMMISYMLDGQGYLIINRECV 283
            G    +  D +  A+  V AFDIETTK PLKFPDA  D IMMISYM+DG GYLI NRE +
Sbjct: 261  G--FFEHTDKVAFADPVVLAFDIETTKPPLKFPDAQLDQIMMISYMIDGDGYLITNREII 318

Query: 284  GEDIEDLEYTPKPEFEGYFKVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLE 343
             EDIED EYTPK E++G F + N  +E+ LL  +F H++E KP +  T+NGD+FDWPF+E
Sbjct: 319  SEDIEDFEYTPKQEYQGLFTIFNEVDEVGLLNRFFEHIREAKPTVISTFNGDFFDWPFVE 378

Query: 344  TRAAHHGFKMSEELGFQCDKNQGECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKL 403
            TR+  HG  M +E+GF  D  +GE ++ +  H+DC+ WVKRDSYLPQGSQGLKAVT+AKL
Sbjct: 379  TRSKIHGINMYDEIGFAADA-EGEYKSSYCAHMDCYRWVKRDSYLPQGSQGLKAVTQAKL 437

Query: 404  GYDPLEVNPEDMVRFAKEKPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEV 463
            GY+P+E++PE M  +A EKPQ+++ YSVSDAVATYYLYM YVHPFIFSL TIIP++PDE 
Sbjct: 438  GYNPIELDPELMTPYAYEKPQILSEYSVSDAVATYYLYMKYVHPFIFSLCTIIPLNPDET 497

Query: 464  LRKGSGTLCEMLLMVQAYKANVICPNKHQSDPEKFYRNHLLESETYIGGHVECLESGVFR 523
            LRKG+GTLCEMLLMVQAY+  +I PNKH    E+FY  HLLESETY+GGHVE LE+GVFR
Sbjct: 498  LRKGTGTLCEMLLMVQAYQNEIILPNKHTDPIERFYDGHLLESETYVGGHVESLEAGVFR 557

Query: 524  SDLPTSFKLDPSAYEQLLNNLDRDLQYAIKVEGKMDLESVSNYDEVKNAIMEKLLRLQEE 583
            SD+P  F +DP+  E L+  L   ++++I+VE    +E V+N++E+K  I  KL  ++  
Sbjct: 558  SDIPNKFTIDPNTVENLMEELTGAMKFSIEVECNSKIEDVTNFEEIKADIANKLTDMKLN 617

Query: 584  PIREECPLIYHLDVAAMYPNIILTNRLQPPSIVTDEVCTACDFNRPGKTCLRKLEWVWRG 643
            P R+E PLIYH+DVA+MYPNI++TNRLQP SI ++  C +CDFNRP K C R+L+W WRG
Sbjct: 618  PQRDELPLIYHVDVASMYPNIMITNRLQPDSIKSERDCASCDFNRPSKKCDRRLKWAWRG 677

Query: 644  EIFMGKRSDYYHLKKQIESEFVDGTNGHLSKSFL---DLPKMEQQSRLKDRLKKYCQKAY 700
              F  K  +Y  +K+ +++E     N    K FL   +L   EQ  ++K RL  Y +K Y
Sbjct: 678  NFFPTKMDEYNMIKRALQNETFKNKNKMSKKPFLTFDELSYTEQVEQIKKRLTDYSKKVY 737

Query: 701  KRVLDKPVTELREAGICMRENSFYVDTVRSFRDRRYEYKGLNKVWKGKLSEAKASGNSIK 760
             +     + E RE+ +C REN FY+DTVRSFRDRRYE+KGL K WKGK+S         K
Sbjct: 738  HKTKVSEIIE-RESIVCQRENPFYIDTVRSFRDRRYEFKGLAKTWKGKMSSLDKDDFHGK 796

Query: 761  IQEAQDMVVLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLI 820
             +EA+ M+VLYDSLQLAHK ILNSFYGYVMRKG+RWYSMEMAG+   TGA IIQ AR ++
Sbjct: 797  -EEAKKMIVLYDSLQLAHKVILNSFYGYVMRKGSRWYSMEMAGITCLTGATIIQMARSIV 855

Query: 821  EKIGKPLELDTDGIWCVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQ 880
            + IG+PLELDTDGIWC++P SFPEN+TF  ++  KKL +SYPC MLN  V +  +N+QYQ
Sbjct: 856  DGIGRPLELDTDGIWCIIPKSFPENYTFTLRN-GKKLFMSYPCSMLNYKVHQQFSNEQYQ 914

Query: 881  TLVDPVSKTYETHSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGF 940
            TL+DP+ K Y+   E SI FEVDGPYKAM+LP SKEEG  IKKRYAVFNDDG+LAELKGF
Sbjct: 915  TLIDPIKKKYKVQKENSIFFEVDGPYKAMVLPTSKEEGKGIKKRYAVFNDDGSLAELKGF 974

Query: 941  EIKRRGELKLIKVFQAELFDKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELID 1000
            E+KRRGEL+LIK FQ+++F  FL G T+E CY +VA VANRWLD+LD +G  + D +LI+
Sbjct: 975  ELKRRGELQLIKNFQSDIFKVFLEGDTLENCYKSVADVANRWLDILDTRGSMLEDEDLIE 1034

Query: 1001 YISESSTMSKSLADYGEQKSCAVTTARRLSDFLGDTMVKDKGLRCQYIVACEPQGTPVSE 1060
             I E+ +MSK+L +Y  QKS ++TTA+RL +FLG+ +V+DKGL+C+YI++ +P   PV+E
Sbjct: 1035 LICENRSMSKTLKEYEGQKSTSITTAKRLGEFLGEEIVRDKGLQCKYIISSKPINAPVTE 1094

Query: 1061 RAVPVAIFETDAEIMKFYLRKWCK--TSSDVGIRSIVDWSYYKQRLSSAIQKIITIPAAM 1118
            RA+PVAIF +D +I + YLR+W +  T  +   RSI+DW YY++R++S +QKIITIPAA+
Sbjct: 1095 RAIPVAIFSSDIQIKRTYLRRWLQDPTLENFDPRSIIDWDYYRERVASVVQKIITIPAAL 1154

Query: 1119 QKVSNPVPRVVHPDWLYKKVREKEDKFRQRKLVDIFSSLKKDDFLN--KTCNAETNLMDE 1176
            Q V+NPVPRV HPDWL KK+  K +K +Q  L   FS  K +D L   K  + E    D 
Sbjct: 1155 QDVTNPVPRVEHPDWLKKKISTKTEKAKQSSLTRFFS--KSNDNLEHRKVNDIEDMFKDT 1212

Query: 1177 NVEDLEDFPKKRRNSVNGPRPIVRCFEVNNEQKTVKTTDQVDSLRQQLEPSEVSDQQPSS 1236
            N E +E F   +          V   +   ++K ++  ++  +    + P+E     P+ 
Sbjct: 1213 NDELIEKFKVGK----------VMSRKFGGKRKRIQDKNENTAEENMVLPAEF----PAI 1258

Query: 1237 QNAIDTENIDRIVDYKGWLELKKRKWK-DNLDRRKKQKLGSLRASHQANGVSESLGDMIN 1295
            ++           +Y GWL+ +K KWK    DR ++ +L                    N
Sbjct: 1259 ED-----------NYVGWLKYQKIKWKIQQKDRNRRNELFG------------------N 1289

Query: 1296 HKEAQRRTGVGSYFRRQETAMTRCHWQIIQLVPSSQSGVFLAWVVVEGIMVRIPITVPRL 1355
            +  +  R  + S  R+Q  +     W+IIQ     Q G    +V++   +  +   +P+ 
Sbjct: 1290 NNSSSGRNMLSSMIRKQAESYANSTWEIIQYKKGDQPGELEVYVLINQKIQVLNFKIPKT 1349

Query: 1356 FYLNSKD---PI--VEKFPGRRVNKTLPHGR-----RSFNLIEVMIDEDQFRKESKKLAA 1405
             ++  K+   PI  ++K    + N  LP+       ++ +L ++ + E  +  ES+   +
Sbjct: 1350 LFIKFKNEEIPINKIKKCTVEKSNAMLPNNHFLNEGKNGSLFKLTLPEKIYEAESEDPTS 1409

Query: 1406 LLADPEV 1412
            +L D  V
Sbjct: 1410 ILNDEGV 1416



 Score =  199 bits (505), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 153/617 (24%), Positives = 292/617 (47%), Gaps = 65/617 (10%)

Query: 1415 LGWQQNAAKIGMQRCAASSQWFNERISLARYAHI-------------------------- 1448
            L WQ   +KI +    +S    +  I+L+ Y++I                          
Sbjct: 1618 LNWQTILSKIIVSNLVSSGSSLHTLITLSHYSNIPICNLKLHEMNFIIDVLYARKLKNEG 1677

Query: 1449 --LWISDDG-VPDLGGTSEEDECFADEVHQPV----LTYPGAYRKVSVELKIHHLSVNAL 1501
              LW +D   +PD GGT +E +     +   +    +  P  Y  V++EL I++L+VN +
Sbjct: 1678 IVLWWNDKTPLPDYGGTQKEFDLNTSWIMNDLKFLEINNPDVYDNVTLELSINNLTVNTV 1737

Query: 1502 LKSNQVNEMEGGGLFGFDQDM-NSGPYNNELCGFDETTSSAPAFRVVKQLIQRCLTDAVT 1560
            L S  ++ ++G  L   +  M N+   N     F + + S  +  V++ ++ +   D   
Sbjct: 1738 LTSAVISSIDGSDLAEVNSLMINNNNENGTGSSFVQDSFSTGSLSVLRSVL-KSWWDQAL 1796

Query: 1561 SGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEFRKLGATIIFANF 1620
             G+V AD ++     W+ +P SKL D  L   ++ + +K    L+ EF  LG+++++A+ 
Sbjct: 1797 KGDVSADLLVNSFVSWVQNPDSKLFDGTLRYHVNNLTKKSLLQLINEFVSLGSSVVYADR 1856

Query: 1621 SKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLFMDQYNYGGIPAR 1680
            +K+ I T K       AY   ++KA+++   F +++L    +W  L++MD++N+ G+   
Sbjct: 1857 NKLFIKTSKTSPENCYAYGQYIVKAIRSSSSFCYLDLSVERYWDILIWMDKFNFSGLA-- 1914

Query: 1681 ADESLDDDSQ-VDIVSSWNIAEYLPKEIQ---DHFVLVVSEFMYIPWKHAQKLAASRASL 1736
             +E  D ++Q +   S W I ++LP   Q   D +++++ + M    K   +   S+A  
Sbjct: 1915 CNEITDSETQEMSAYSQWQIKDFLPAIYQPEFDDWIMIILDSMV---KSKDQYYESKAGT 1971

Query: 1737 QEGSSCTPSITVAAAENFESHIVQYVKGEISSY---FTGKLLSIVRDAIHHMKKMNND-Q 1792
            Q  +   P +     ++ E+       G + +Y   F   LL  V+    + ++   D Q
Sbjct: 1972 QRLTQL-PIVKDRNNDDDET-------GPLENYTKMFYQTLLQRVQKLFRNQQEFILDPQ 2023

Query: 1793 HNSPGVMQTAANIH-KVDAP-LEFIKHVCAAFALDQNVQHDVLVMRKNLLKYVRVREFAP 1850
            + +  +       H  +  P LEF+K +C    L      +V  +RK LLK   +REF  
Sbjct: 2024 YKNDYIFPVVPGSHLNMKNPLLEFVKFICQVMLLSTKTTLEVRELRKELLKIFEIREFEK 2083

Query: 1851 EAEFRDPCPSFILPNVICSYCNDCRDLDLCRDMALLAQDWHCAMPQCGQPYDREVMENAL 1910
            ++EF++P  S ++   +C +C    D+D+C+  A +   + C   +C +P  +++ E+ L
Sbjct: 2084 KSEFQNPSSSLVINCFLCEHCYHITDIDICK--ANIETVFSCE--RCEKPLAKQLFEDHL 2139

Query: 1911 LQIVRQRERLYHLQDLVCIRCNQVKAAHLAEQCACAGSFRCKEDASDFRSKMQIFLNIAN 1970
            +Q++      Y+ QD  C++C +VK   ++E C C+G++      ++   K++I+  +AN
Sbjct: 2140 IQMLVSDFEAYYTQDPRCVKCRRVKKDLMSEHCPCSGNWINTISQAELLQKVKIYNQVAN 2199

Query: 1971 RQGFQLLQECTSWILEV 1987
               F  L   TS I EV
Sbjct: 2200 HYNFIRL---TSAITEV 2213


>gi|299473108|emb|CBN78684.1| DNA polymerase [Ectocarpus siliculosus]
          Length = 1416

 Score = 1271 bits (3288), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 676/1429 (47%), Positives = 891/1429 (62%), Gaps = 110/1429 (7%)

Query: 11   GRRTKKQKL-IRSAEEELEAKLGYDLFSEGDKRLGWLLTFASSSLEDEDTRKVYSCIDLY 69
            GR+    K  +R   + L+ + GYD +SEG  RLGW+     +S+ D    +  S +D+Y
Sbjct: 61   GRKESAVKAALREQGDALDKRFGYDRYSEGPPRLGWIFNMLPTSIPDASGNE-KSGLDMY 119

Query: 70   FVSQDGSTFKSKYKFRPYFYAATKEKMEM-DVEAYLRRRYESQIADIEILEKEDLDLKNH 128
            F+ QDG TFK+   ++PYFY   KE+  + D    +RRR+E    ++ +++KEDLD+ NH
Sbjct: 120  FLEQDGGTFKATVFYKPYFYVLVKEERYIQDCIQCIRRRFEDSAVEVTVVDKEDLDMPNH 179

Query: 129  LSGLHKSYLKISFDTVQQLMDVKKDLLHVVERNQAKFDAAEAYESILTGKREQRPQDFLD 188
            LSG  + +LK+SF +V  LM+VK+ L+  ++ N+ + +A +AY  +    REQ+P DFL 
Sbjct: 180  LSGKLRRFLKLSFHSVADLMEVKRALMPTIQANKTRAEAQDAY--MHAEAREQQPSDFLS 237

Query: 189  CIVDLREYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLLEKRVDLLQRAEVHVCAFDIET 248
             +VD REYDVPY++R +ID D+R G WY V+    G  +  + +++ +AE  V A+DIE 
Sbjct: 238  VLVDAREYDVPYYVRCSIDLDIRVGAWYMVTPQEEGVDVAWQKEMVDKAEPKVLAYDIEC 297

Query: 249  TKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNVN 308
            TK PLKFP+ + D + MISYM+DGQGYLII+RE V ED+E+ EYTPKP F G F + N  
Sbjct: 298  TKAPLKFPNVEIDQVFMISYMVDGQGYLIISREVVSEDVENFEYTPKPSFPGPFHIFNEP 357

Query: 309  NEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDKNQGEC 368
            NE  ++R +F H+ E++P I VTYNGD+FDWPF++ RA  +G  M +E+G     N GE 
Sbjct: 358  NEEAVIRRFFKHVAELRPQIIVTYNGDFFDWPFVDERAKGYGLDMEKEIGVGLQAN-GEY 416

Query: 369  RAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQMMAS 428
            R +   H+D   WVKRDSYLPQGS GLKAVTK KLGYDP+EV+PEDMVR+A E+P  MA+
Sbjct: 417  RGRCVAHMDAIYWVKRDSYLPQGSHGLKAVTKYKLGYDPVEVDPEDMVRYASERPTEMAA 476

Query: 429  YSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVICP 488
            YSVSDAVATYYLY TYVH F+FSL TIIPM PD+VLRKGSGTLCE LLMV+AY+ N++CP
Sbjct: 477  YSVSDAVATYYLYQTYVHMFVFSLCTIIPMGPDDVLRKGSGTLCEALLMVEAYRGNIVCP 536

Query: 489  NKHQSDPEKFYRNHLLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQLLNNLDRDL 548
            NKH     KF+  HL+ESETYIGGHVECLE+GVFRSDLP  F+L PSA + L++N+DRDL
Sbjct: 537  NKHSEPLTKFHDGHLVESETYIGGHVECLETGVFRSDLPEKFRLVPSALQALIDNVDRDL 596

Query: 549  QYAIKVEGKMDLESVSNYDEVKNAIMEKLLRLQEEPIREECPLIYHLDVAAMYPNIILTN 608
             +AI+VE  +  ++VSNYDEV++ I+E+L  L++ P+REE P IYHLDVAAMYPNIIL+N
Sbjct: 597  TFAIEVESGVQRDTVSNYDEVRSEIIEQLEMLRDSPLREEEPFIYHLDVAAMYPNIILSN 656

Query: 609  RLQPPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYYHLKKQIESEFVDGT 668
            RLQP +IV   +C +CDFN+    C R L W WRG++    R++Y  +K Q+  E VDG 
Sbjct: 657  RLQPGAIVNKAMCASCDFNQDSNNCKRSLTWKWRGDMTPASRTEYQSVKMQLTYENVDG- 715

Query: 669  NGHLSKSFLDLPKMEQQSRLKDRLKKYCQKAYKRV-LDKPVTELREAGICMRENSFYVDT 727
                 K F++L + +Q + ++ RLK Y  K YK+  + K   E R   +CMREN FYV+T
Sbjct: 716  -----KPFVELDEADQATNVRARLKNYAHKVYKKTKITK--EEERVDTVCMRENPFYVNT 768

Query: 728  VRSFRDRRYEYKGLNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHKCILNSFYG 787
            VR+FRDRRY+YK L K  K   S+A   G+++  +EA D   ++DSLQLAHKCILNSFYG
Sbjct: 769  VRAFRDRRYDYKILTKKAKKAKSKAAEEGDAVGAKEAGDRAQVFDSLQLAHKCILNSFYG 828

Query: 788  YVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLPGSFPENFT 847
            YVMRKGARW SMEMAG+VTYTGA +I+ AR L+E+IG+PLELDTDGIWC+LP SFPENFT
Sbjct: 829  YVMRKGARWRSMEMAGIVTYTGAMLIKQARELVEQIGRPLELDTDGIWCILPSSFPENFT 888

Query: 848  FKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEFEVDGPYK 907
            F TK    K+ ISYPCVMLN DV  N TN QYQ L DP ++ Y T SECSI FEVDGPY+
Sbjct: 889  FTTKS-GGKIRISYPCVMLNADVHENYTNHQYQDLQDPATRKYNTKSECSIFFEVDGPYR 947

Query: 908  AMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFLHGST 967
             M+LP+S EEG L+KKRYAVFN DG+LAELKGFE+KRRGEL++IKVFQ++          
Sbjct: 948  CMVLPSSTEEGKLLKKRYAVFNHDGSLAELKGFELKRRGELEVIKVFQSQ---------- 997

Query: 968  IEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLADYGEQKSCAVTTAR 1027
                                                 S T ++ LAD             
Sbjct: 998  -----------------------------------GTSQTTARRLAD------------- 1009

Query: 1028 RLSDFLGDTMVKDKGLRCQYIVACEPQGTPVSERAVPVAIFETDAEIMKFYLRKWCKTSS 1087
                FLG  MVKDKGL C+ I++  P G PV++RAVP AIF  +  + K YLRKW K  +
Sbjct: 1010 ----FLGAEMVKDKGLNCRMILSNRPHGAPVTDRAVPTAIFSAEPAVKKHYLRKWLKDPA 1065

Query: 1088 --DVGIRSIVDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLYKKVREKEDKF 1145
              D  IRSI+DW YY  RL + I+KIITIPAAMQKV NP PRV HPDWL K VRE  D +
Sbjct: 1066 MEDFDIRSILDWDYYLDRLGNCIRKIITIPAAMQKVENPCPRVKHPDWLRKIVREINDGY 1125

Query: 1146 RQRKLVDIFSSLKKDDFLNKTCNAETNLMDE---NVEDLEDF-------PKKRRNSVNGP 1195
            RQ K+  +F +            A T           D+ED              S+ G 
Sbjct: 1126 RQTKIDQLFKAAPPGTPQLTNAGASTKAKPTPAPAATDIEDMAGGGGGGGGAAGRSILGA 1185

Query: 1196 RPIVRCFEVNNEQKTVKTTDQVDSLRQQLEPSEVSDQQPSSQNAIDTENIDRIVDYKGWL 1255
            R  V    + N            S  ++        Q+   +   +   I R  D++GWL
Sbjct: 1186 RARV-TKRIGNGAAAGGALAPDGSPGKENADVGGGGQEEEEEEEEEAVPIRREDDFQGWL 1244

Query: 1256 ELKKRKWKDNLDRRKKQKLGSLRASHQAN---------GVSESLGDMINHKEAQRRT--- 1303
              +K  WK   ++ + ++    R+   A+             +        E +RRT   
Sbjct: 1245 AQQKAGWKKRREQNRLKRRTEARSQAMASFRGSGSSGARGGTAGLGAAGAAEKRRRTAAM 1304

Query: 1304 ---GVGSYFRRQETAMTRCHWQIIQLVPSSQSGVFLAWVVV-EGIMVRIPITVPRLFYLN 1359
               G+  Y    + A+ R  WQ++++ PS   G F  + +   G +  IPIT+PR+FY+N
Sbjct: 1305 GKSGLQGYLTSAQDALLRGFWQVVEIRPSDNPGSFTVFAMTGPGELQVIPITIPRVFYVN 1364

Query: 1360 ---SKDPIVEKFPGRRVNKTLPHGRRSFNLIEVMIDEDQFRKESKKLAA 1405
                K P      GRRV +TLP+G  S  L EV +DE +F++  K+  A
Sbjct: 1365 CLEDKGPAGSSAMGRRVARTLPNGHGSPFLYEVAMDEAKFQRNEKQPVA 1413


>gi|380089161|emb|CCC12927.1| unnamed protein product [Sordaria macrospora k-hell]
          Length = 2226

 Score = 1270 bits (3286), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 667/1421 (46%), Positives = 901/1421 (63%), Gaps = 113/1421 (7%)

Query: 22   SAEEELEAKLGYDLFSEGDKRLGWLLTFASSSLEDE--DTRKVYSCIDLYFVSQDGSTFK 79
            +A   ++  +G+  +  G KR GWL+   +++++D         + +D YF+ +DGSTFK
Sbjct: 32   AASASIDENMGFARYDAGKKREGWLVNVQATAIDDPRIPGGGGRAALDCYFIEEDGSTFK 91

Query: 80   SKYKFRPYFYAATKEKMEMDVEAYLRRRYESQ-IADIEILEKEDLDLKNHLSGLHKSYLK 138
            +  ++ PYF  A ++  E +VE + +R      +  I  +EKEDL + NHL G  +++L+
Sbjct: 92   ATVEYEPYFLVACRKGHEGEVEEWCKRVPGGGCVKSIRRVEKEDLKMPNHLLGYRRTFLE 151

Query: 139  ISFDTVQQLMDVKKDLLHVVERNQAKFDAAEAYESILTG-----------KREQRPQDF- 186
            + F  VQ LM  K+D++ + E+N+   DA + Y  + +            + ++R  +  
Sbjct: 152  LRFHNVQDLMSAKRDVMPIAEKNKEGMDAMDTYAEVASANGGFDLFDDDSRNDERRHNAG 211

Query: 187  ----LDCIVDLREYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLLEKRVDLLQRAEVHVC 242
                 D IVD+REYDVPYH+R  ID D+R  +WY V   +    ++   + L  A+  V 
Sbjct: 212  FAEASDFIVDIREYDVPYHVRVMIDLDIRVARWYHVEAKNGVTTIKVNEERLAMADPVVM 271

Query: 243  AFDIETTKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYF 302
            A+DIETTKLPLKFPDA  D IMM+SYM+DGQG+LI NRE + EDI D +YTPKPE++G F
Sbjct: 272  AYDIETTKLPLKFPDAAIDQIMMVSYMIDGQGFLITNREIISEDISDFDYTPKPEYQGPF 331

Query: 303  KVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCD 362
             + N  +E  L+  +F H++E +P +  TYNGD+FDWPF+E RA+ +G  M  E+G++ D
Sbjct: 332  MIFNEPDEKALIERFFLHIKEARPTVIATYNGDFFDWPFVEARASINGIDMYHEIGWKKD 391

Query: 363  KNQGECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEK 422
             ++ + +  ++ H+DCF WV RDSYLPQGS+GLKAVT AKLGYDP E++PE M  +A E+
Sbjct: 392  -SEDQYKCNYSVHMDCFHWVNRDSYLPQGSRGLKAVTVAKLGYDPDELDPELMTPYASER 450

Query: 423  PQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYK 482
            PQ +A YSVSDAVATYYLYM YVHPFIFSL TI+P+ PD+ LRKG+GTLCEMLLMVQAY+
Sbjct: 451  PQTLAEYSVSDAVATYYLYMKYVHPFIFSLCTILPLGPDDTLRKGTGTLCEMLLMVQAYQ 510

Query: 483  ANVICPNKHQSDPEKFYRNHLLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQLLN 542
              ++ PNKH    E F+  HLL+SET                                  
Sbjct: 511  KEIVLPNKHVQPKESFWEGHLLDSET---------------------------------- 536

Query: 543  NLDRDLQYAIKVEGKMDLESVSNYDEVKNAIMEKLLRLQEEPIREECPLIYHLDVAAMYP 602
                     I VE K +L  ++NYDEVK  I  +L+ L+E P R E PLIYHLDVA+MYP
Sbjct: 537  ---------ITVEEKKELSDITNYDEVKKQITARLVNLKETPNRLERPLIYHLDVASMYP 587

Query: 603  NIILTNRLQPPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYYHLKKQIES 662
            NI+ TNRLQP S++++  C ACDFNRPGKTC R+L W WRGE    KR +Y  ++  +E+
Sbjct: 588  NIMTTNRLQPDSMISESNCAACDFNRPGKTCDRRLPWAWRGEYLPAKRDEYNMIRHALEN 647

Query: 663  EFVDGTNGHLS-KSFLDLPKMEQQSRLKDRLKKYCQKAYKRVLDKPVTELREAGICMREN 721
            E   G   +   +SF DL   EQ + ++ RL+ Y QK Y ++ D   T +REA IC REN
Sbjct: 648  ERFPGKYPNSPMRSFQDLSADEQATLIRKRLQLYSQKVYHKIHDS-TTIVREAIICQREN 706

Query: 722  SFYVDTVRSFRDRRYEYKGLNKVWKGKLSEAKASGNSI-KIQEAQDMVVLYDSLQLAHKC 780
             FY++TVR FRDRRY+YKG  KVWKGK    K +G S  ++  A+ M++L+DSLQLAHK 
Sbjct: 707  PFYINTVRDFRDRRYDYKGKAKVWKGKTDALKTAGASASEVDNAKKMIILFDSLQLAHKV 766

Query: 781  ILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLPG 840
            ILNSFYGYVMRKG+RWYSMEMAGV   TGA IIQ AR LI+++G+PLELDTDGIWC+LP 
Sbjct: 767  ILNSFYGYVMRKGSRWYSMEMAGVTCLTGATIIQLARQLIDRLGRPLELDTDGIWCMLPA 826

Query: 841  SFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEF 900
            +FPENF FK K+  KK+TISYPCVMLN  V    TN QYQ LVDP +  YETHS+ SI F
Sbjct: 827  TFPENFVFKLKN-GKKMTISYPCVMLNHLVHDKFTNHQYQDLVDPKTFKYETHSDNSIFF 885

Query: 901  EVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFD 960
            EVDGPYK M+LP SKEE   +KKRYAVFNDDG+LAELKGFE+KRRGELKLIK+FQ ++F 
Sbjct: 886  EVDGPYKCMVLPTSKEEDKNLKKRYAVFNDDGSLAELKGFEVKRRGELKLIKIFQQQIFK 945

Query: 961  KFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLADYGEQKS 1020
             FL G+T+ ECY+AVA VANRWLD+L ++G  +AD EL++ ISE+ +MSK+L +YG QKS
Sbjct: 946  FFLEGTTLAECYTAVAKVANRWLDVLHSKGATLADEELMELISENRSMSKTLEEYGSQKS 1005

Query: 1021 CAVTTARRLSDFLGDTMVKDKGLRCQYIVACEPQGTPVSERAVPVAIFETDAEIMKFYLR 1080
             ++TTARRL+DFLG+ MVKDKGL C++I+   P+  PV+ERAVPVAIF  + E  + YL+
Sbjct: 1006 TSITTARRLADFLGEQMVKDKGLNCKFIICARPKNAPVTERAVPVAIFSAEEETKRMYLK 1065

Query: 1081 KWCKTS-SDVGIRSIVDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLYKKVR 1139
            KW K   +D   R+++DW YY +RL S IQK+ITIPAA+QKV NPVPRV HPDWL +++ 
Sbjct: 1066 KWLKEEPADTDPRALLDWDYYLERLGSVIQKLITIPAALQKVRNPVPRVPHPDWLQRRIN 1125

Query: 1140 EKEDKFRQRKLVDIFSSLKKDDFLNKTCNAETNLMDENVEDLEDFPKKRRNSVNGPRPIV 1199
             KEDK +Q+KL D+F    K    + T +A +      + D+EDF        N  +P  
Sbjct: 1126 IKEDKMKQKKLTDLFGPTTKGPLQDITHHANST----QLGDMEDFG-------NLLKPKT 1174

Query: 1200 RCFEVNNEQKTVKTTDQVDSLRQQLEPSEVSDQQPSSQNAIDTENIDRIVDYKGWLELKK 1259
                ++  QKT     + D      EP+   +  P +  A+  +      DY  +LE +K
Sbjct: 1175 VSDAISATQKTASAQKRKDP-----EPAAAENLDPFA--ALPPKMPSPSEDYAAFLEYQK 1227

Query: 1260 RKWKDNLDRRKKQK--LGSLRASHQANGVSESLGDMINHKEAQRRTGVGSYFRRQETAMT 1317
            +KWK     R +++   G  R + Q+N                    +   FR Q     
Sbjct: 1228 QKWKLQKQARARRRHLFGEKRGNVQSN--------------------IQQTFRSQAEMTF 1267

Query: 1318 RCHWQIIQLVPSSQSGVFLAWVVVEGIMVRIPITVPRLFYLNSK-----DPIVEKFPGRR 1372
            R  WQ++QL  S   G+  A V+++  +  + I VPR  +LN K     D  VE     +
Sbjct: 1268 RNTWQLLQLRASDSPGIVTAHVLIDAKIHTLKINVPRQVFLNLKSRDLPDIEVEGCHVEQ 1327

Query: 1373 VNKTLPHGRRSFNLIEVMIDEDQFRKESKKLAALLADPEVE 1413
            VN TLP+G  S +L ++ + ED +  E++K + L   P VE
Sbjct: 1328 VNHTLPNGHSSVHLFKLTVPEDIYFAEAEKFSLLFNHPSVE 1368



 Score =  229 bits (583), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 166/665 (24%), Positives = 290/665 (43%), Gaps = 109/665 (16%)

Query: 1408 ADPEVEVLGWQQNAAKIGMQRCAASSQWFNERISLARYAHI------------------- 1448
             D  +  LGWQ   A+  +    +   W     +LARY  +                   
Sbjct: 1565 GDSSLPPLGWQSVVARRLVNHYLSLGSWITHMTALARYGDVPLCNLERDDPRFLIDIAYA 1624

Query: 1449 ---------LWISDDGVPDLGGTSEEDECFA-DEVHQPVLTYPGAYRKVSVELKIHHLSV 1498
                     LW S    PD  G  ++D     D+V  P +  PG Y  V ++L++ +L++
Sbjct: 1625 RRLMANNVVLWWSPSPRPDHAGYEKDDVVGPLDQVQMPSVNNPGTYASVCIDLEVRNLAI 1684

Query: 1499 NALLKSNQVNEMEGGGLFGFDQDMNS-GPYNNELCGFDETTSSAPAFRVVKQLIQRCLTD 1557
            N +L S+ +NE+EG     F+   +S G  + E   + E   +    +V++++++    +
Sbjct: 1685 NTILTSSLINELEGADSISFNPAADSNGNGDGEEFLYSENAFANAGVQVLREMVKSWWAE 1744

Query: 1558 AVTSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEFRKLGATIIF 1617
            A   G+  AD ++QHL RW+ SP S L+D  LH  +  + +K    L+A+FR++G+ +IF
Sbjct: 1745 AC-KGSTMADVMVQHLVRWVESPASCLYDRALHYYVQMMSRKALLQLMADFRRVGSHVIF 1803

Query: 1618 ANFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLFMDQYNYGGI 1677
            A+ +++++ T K ++  A AY   +LK+++ + LF +I+LE   +W  L++ D++NYGG 
Sbjct: 1804 ASSNRLLLQTTKSEVGNAYAYAQYILKSIKGKPLFHFIDLEIKEYWDYLVWYDEFNYGG- 1862

Query: 1678 PARADESLDDDSQ-VDIVSSWNIAEYLPKEIQDHFVLVVSEFMYIPWKHAQKLAASRASL 1736
                 E L+ D Q + ++  W +A +LP  +Q  F   V EF+ +   H  K    R S 
Sbjct: 1863 -KATQEVLEQDEQDLQMIMHWQMATFLPVRLQPIFRDWVVEFIQL--MHGIK----RPSF 1915

Query: 1737 QEGSSCTPSIT----------------VAAAENFESHIVQYVKGEISS------------ 1768
                + TP +T                +   + FE  + + +   I++            
Sbjct: 1916 GSDPTATPRLTQLPVNMRGGEDGAVGQIILGKAFEKPLKKEIANLINTQNRELLHPELAG 1975

Query: 1769 -YFTGKLLSIVRDAIHHMKKMNNDQHNSP-GVMQTAANIHKVDAPLEFIKHVCAAFALDQ 1826
             Y   +L       +      ++   N+  G  + AA+ + V   LE +K +    +LD+
Sbjct: 1976 DYTFPQLPGSHLSHLSSSTSKSSMTKNAAGGGKKVAASANPV---LELVKALMQVLSLDK 2032

Query: 1827 NVQHDVLVMRKNLLKYVRVREFAPEAEFRDPCPSFILPNVICSYCNDCRDLDLCRDMALL 1886
            N+  +  ++RK LL    VREF+ +  F++P  S  L    C  C   RD+DLCRD   +
Sbjct: 2033 NITLEARLLRKELLAMFDVREFSKDGAFQNPSESLRLAQFSCDNCTMARDIDLCRDEDFM 2092

Query: 1887 AQD----------------------------------WHCAMPQCGQPYDREVMENALLQ 1912
                                                 W C  P C   YDR  +E  L+ 
Sbjct: 2093 GSSAAAAASDALGGGGGGAAELDGGQQGQGQGQEKGRWKC--PYCEMDYDRNEIEERLVA 2150

Query: 1913 IVRQRERLYHLQDLVCIRCNQVKAAHLAEQCACAGSFRCKEDASDFRSKMQIFLNIANRQ 1972
             V      +  QDL C RC  ++     E C C+G +R      +   +++++ N+A   
Sbjct: 2151 EVEAMVVEWTTQDLKCGRCGALRVNEFMEHCTCSGEWRELVKREEVMRRLKVYRNVARYY 2210

Query: 1973 GFQLL 1977
            G ++L
Sbjct: 2211 GLRML 2215


>gi|406604446|emb|CCH44105.1| DNA polymerase epsilon subunit 1 [Wickerhamomyces ciferrii]
          Length = 2193

 Score = 1269 bits (3284), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 663/1405 (47%), Positives = 907/1405 (64%), Gaps = 72/1405 (5%)

Query: 25   EELEAKLGYDLFSEGDKRLGWLLTFASSSLEDEDTRKVYSCIDLYFVSQDGSTFKSKYKF 84
            ++++  +G++ F  G  + GWL    ++++  +D     S +D YF+ ++G TFK+  ++
Sbjct: 55   DQIDTMMGFERFDSGPSKTGWLCNMHATTIPSKDYIAGVSGVDYYFLDEEGGTFKATIQY 114

Query: 85   RPYFYAATKEKMEMDVEAYLRRRYESQIADIEILEKEDLDLKNHLSGLHKSYLKISFDTV 144
             PYF        E +VE  L+++ E  +  +  +EK+DL + NHL G+  S L+++F + 
Sbjct: 115  DPYFLVVCTPGSEAEVEELLKKKLEQYLKSVAKIEKDDLAIPNHLIGIKSSLLRLNFPSS 174

Query: 145  QQLMDVKKDLLHVVERNQAKFDAAEAYESI---------LTGKREQRPQDFLDCIVDLRE 195
              + + KK +  +V+ NQ K D  + Y ++         L  K E    D  D I D+RE
Sbjct: 175  SDMFEAKKIIQPIVKENQTKKDTKDLYSAVNNNYTDAFSLQNKVESH-VDATDYIEDIRE 233

Query: 196  YDVPYHIRFAIDNDVRCGQWYDVSISSTGPLLEKRVDLLQRAEVHVCAFDIETTKLPLKF 255
            +DVPY  R +ID ++R G+WY VS        E+  D +   +  + AFDIE TK PLKF
Sbjct: 234  HDVPYCTRVSIDKNLRVGKWYKVSADQGDVETEEIPDRIDFGDAVILAFDIEATKRPLKF 293

Query: 256  PDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNVNNEIELLR 315
            PD+  D +MMISYM+DG G+LI NRE + EDI+D EYTPK E+ G F V N  +E   L 
Sbjct: 294  PDSSIDQVMMISYMIDGDGFLITNREIISEDIDDFEYTPKAEYPGLFTVFNEPDEKATLE 353

Query: 316  LWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDKNQGECRAKFACH 375
             +F H++E KP I  T+NGD+FDWPF+E RA  H   M +E+GF  D  +GE ++ +  H
Sbjct: 354  RFFEHIREAKPTIIATFNGDFFDWPFIEARANVHDLDMFDEIGFAID-GEGEYKSTYCAH 412

Query: 376  LDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQMMASYSVSDAV 435
            +DCF WVKRDSYLPQGSQGLKAVT +KLGY+P+E++PE M  +A  KPQ+++ YSVSDAV
Sbjct: 413  MDCFRWVKRDSYLPQGSQGLKAVTTSKLGYNPIELDPELMTPYAYSKPQLLSEYSVSDAV 472

Query: 436  ATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVICPNKHQSDP 495
            ATYYLY   +  FI SL  I+P++PDE+LRKG+GTLCEMLLMVQAY+ +++ PNKH    
Sbjct: 473  ATYYLYKKIISNFIISLGIIVPLNPDELLRKGTGTLCEMLLMVQAYENDILLPNKHVDPL 532

Query: 496  EKFYRNHLLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQLLNNLDRDLQYAIKVE 555
            E+FY  HLLESETY+GGHVE LE+GVFRSDL + FK+DP+A ++L+ +LD  L+++I VE
Sbjct: 533  ERFYDGHLLESETYVGGHVESLEAGVFRSDLESEFKIDPTAIDELIADLDNALKFSIVVE 592

Query: 556  GKMDLESVSNYDEVKNAIMEKLLRLQEEPIREECPLIYHLDVAAMYPNIILTNRLQPPSI 615
             K+ LE V NYDEV N +  +LL L+E P R E PLIYH+DVA+MYPNI+ +NRLQP S+
Sbjct: 593  SKVKLEDVENYDEVYNDVKSQLLALRENPKRSEKPLIYHVDVASMYPNIMCSNRLQPDSM 652

Query: 616  VTDEVCTACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYYHLKKQIESE-FVDGTNGHLSK 674
             T++ C ACDFNRPGKTC R++ W WRGE +  K  +Y  +K+ +++E F         +
Sbjct: 653  KTEKDCAACDFNRPGKTCDRRMTWAWRGEYYPPKMDEYGMVKRSLQNETFPPKKPYQPRR 712

Query: 675  SFLDLPKMEQQSRLKDRLKKYCQKAYKRVLDKPVTELREAGICMRENSFYVDTVRSFRDR 734
            +F DL   EQ +++K RL+ Y +K Y +V      E RE+ IC REN FYVDTVRSFRDR
Sbjct: 713  TFEDLSYQEQVAQIKKRLQDYSRKNYHKVKQSETVE-RESIICQRENPFYVDTVRSFRDR 771

Query: 735  RYEYKGLNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHKCILNSFYGYVMRKGA 794
            RYE+KGL KV+K K S+ K   +    +EA+  VV YDSLQLA K ILNSFYGYVMRKG+
Sbjct: 772  RYEFKGLAKVYKKK-SDTK---DRTAKEEAEKRVVYYDSLQLAFKVILNSFYGYVMRKGS 827

Query: 795  RWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLPGSFPENFTFKTKDLK 854
            RWYS+EMAG+   TGA IIQ AR LIE++G+PLELDTDGIWC+LP SFPE+FTF  K+ K
Sbjct: 828  RWYSIEMAGITCLTGATIIQMARGLIERLGRPLELDTDGIWCILPKSFPEDFTFNLKNGK 887

Query: 855  KKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEFEVDGPYKAMILPAS 914
            K    SYPC MLN  V    TN QYQTLVDPV+K YETHS+ SI FEVDGPYKAM+LP S
Sbjct: 888  KAFC-SYPCSMLNYLVHEQFTNHQYQTLVDPVTKKYETHSDNSIFFEVDGPYKAMVLPTS 946

Query: 915  KEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFLHGSTIEECYSA 974
            KEEG  +KKRYAVFNDDG+LAELKGFE+KRRGEL+LIK FQ+++F  FL G T+E CY A
Sbjct: 947  KEEGKGLKKRYAVFNDDGSLAELKGFELKRRGELQLIKNFQSDIFKLFLEGDTLEGCYGA 1006

Query: 975  VAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLADYGEQKSCAVTTARRLSDFLG 1034
            VA VANRWLD+LD +G+ + D +LI+ I E+ +MSKSL +Y  QKS ++TTARRL +FLG
Sbjct: 1007 VANVANRWLDVLDTKGRMLEDEDLIELICENKSMSKSLEEYEGQKSTSITTARRLGEFLG 1066

Query: 1035 DTMVKDKGLRCQYIVACEPQGTPVSERAVPVAIFETDAEIMKFYLRKWCKTSS--DVGIR 1092
              MVKDKGL+ +YI++  P   PV+ERA+PVAIF +D  + + +LR+W    S  D   R
Sbjct: 1067 AEMVKDKGLQVKYIISERPINAPVTERAIPVAIFSSDITVKRNFLRRWLLDPSLDDFDAR 1126

Query: 1093 SIVDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLYKKVREKEDKFRQRKLVD 1152
            +I+DW+YYK+RL S IQKIITIPAA+Q + NPV RV HPDWL K++   +DK +Q  L  
Sbjct: 1127 NIIDWNYYKERLESVIQKIITIPAALQDIENPVSRVAHPDWLQKRIATSKDKKKQSSL-- 1184

Query: 1153 IFSSLKKDDFLNKTCNAETNLMDENVEDLEDFPKKRRNSVNGPRPIVRCFEVNNEQKTVK 1212
                     F  KT +   ++M    +D+ED  K+  N ++G +P+V             
Sbjct: 1185 -------STFFTKTKSNPIDIM----KDIEDIGKE--NELSGKKPLV------------- 1218

Query: 1213 TTDQVDSLRQQLEPSEVSDQQPSSQNAIDTENIDRIVDYKGWLELKKRKWKDNLDRRKKQ 1272
               +V S +++   +E S+      N ++        DY G+L  +K KWK     R+++
Sbjct: 1219 --GKVTSKKRKNHHTESSEPSEEDTNLLNGPCPAPDEDYVGFLAYQKVKWKVQKKSRERR 1276

Query: 1273 KLGSLRASHQANGVSESLGDMINHKEAQRRTGVGSYFRRQETAMTRCHWQIIQLVPSSQS 1332
            K     +S                 E+  R+ VG+  R Q        WQ++Q    S  
Sbjct: 1277 KALFGESS-----------------ESSYRSTVGNMVRNQAENFAGSTWQVLQYKLDSNP 1319

Query: 1333 GVFLAWVVVEGIMVRIPITVPRLFYLNSK-----DPIVEKFPGRRVNKTLPHGRRSFNLI 1387
            G   A+V+++G +      +PR  Y++ +     D  +      +VN  LP+G ++ NL 
Sbjct: 1320 GDIKAFVLIDGKIQSFIFHIPRKLYMSFRSSVLPDGTIPSCEVEKVNSILPNGHKASNLF 1379

Query: 1388 EVMIDEDQFRKESKKLAALLADPEV 1412
            ++ + E  ++ E  K  ++L +P V
Sbjct: 1380 KLTMPETVYQDELSKAGSVLQNPNV 1404



 Score =  252 bits (644), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 171/614 (27%), Positives = 294/614 (47%), Gaps = 73/614 (11%)

Query: 1412 VEVLGWQQNAAKIGMQRCAASSQWFNERISLARYAHI----------------------- 1448
            V  +GWQ    K       A + W    ++LA+Y +I                       
Sbjct: 1601 VPAIGWQGIVLKRVCNHYLALASWIKHLLALAKYGNIPLCNLRADNIGYLIDIEYARRLK 1660

Query: 1449 -----LWISDDGVPDLGGTSEEDECFADEVHQ-PVLTYPGAYRKVSVELKIHHLSVNALL 1502
                 LW S    PD GG  ++     +E ++ P++  P  Y  V++E+ + +L++N +L
Sbjct: 1661 KSDIVLWWSPRPTPDYGGLEKDSILMDNENYEFPIINNPEIYETVALEVDVSNLTINTVL 1720

Query: 1503 KSNQVNEMEGGGLFGFD--QDMNSGPYNNELCGFDETTSSAPAFRVVKQLIQRCLTDAVT 1560
             S  +NE EG  L   +   D NSG        F E + S P   V++ +++    DAV 
Sbjct: 1721 TSALINEAEGTDLAEVELIHDENSG-----TSTFAEDSFSGPGLSVLRTMVKDWWDDAVK 1775

Query: 1561 SGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEFRKLGATIIFANF 1620
              N  AD+++     W+    S L+D  L   +H + +K    L+ EF KLG+++IFAN 
Sbjct: 1776 D-NANADSMVHTFVSWVQDSQSYLYDSSLKYHVHNLTKKALLQLVGEFSKLGSSVIFANR 1834

Query: 1621 SKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLFMDQYNYGGIPAR 1680
            SK+I+ T K  +  + AY   ++KA+++R LF +++L+   +W  L++MD++N+GG   R
Sbjct: 1835 SKIILRTSKVSVETSYAYAQYVVKAVRSRPLFNYLDLQIDKYWDLLIWMDEHNFGG---R 1891

Query: 1681 ADESLDDDSQVDIV--SSWNIAEYLPKEIQDHFVLVVSEFMYIPWKHAQKLAASRASLQE 1738
            A   + +  + D++  S W I +YLP  IQ  F   V  F+    K   K+A   +    
Sbjct: 1892 ACLEISEKEEQDLIGLSKWQIKQYLPSIIQPEFEDWVIIFLDALIKDKNKMANVLS---- 1947

Query: 1739 GSSCTPSITVAAAENFESHIVQYVKGE----------ISSYFTGKLLSIVRDAIHHMKK- 1787
                TP +T        +HI++  +G           +   F   LL  V+  + +  + 
Sbjct: 1948 ----TPRVTQI------NHILKKNQGTKTQDEDIQNGLFESFRKPLLKRVKQLLRNQTEA 1997

Query: 1788 -MNNDQHNSPGVMQTAANIHKVDAP-LEFIKHVCAAFALDQNVQHDVLVMRKNLLKYVRV 1845
             ++ D  N     +   +   +  P LE +K +CA F+L +     V ++RK LL    +
Sbjct: 1998 ILDTDLINEYEFPRLPGSSTVLKNPVLELVKFLCAIFSLSKKRNLSVRLLRKELLNIFEI 2057

Query: 1846 REFAPEAEFRDPCPSFILPNVICSYCNDCRDLDLCRDMALLAQDWHCAMPQCGQPYDREV 1905
            REFA E+ F +P  S  +P ++C YC+  RDLD CRD A     W C   +C   Y++ +
Sbjct: 2058 REFAKESVFYNPSKSLKVPGILCEYCHHIRDLDFCRDEA--KHLWKCE--KCDHNYNKAL 2113

Query: 1906 MENALLQIVRQRERLYHLQDLVCIRCNQVKAAHLAEQCACAGSFRCKEDASDFRSKMQIF 1965
            +E  L+  + +    + +QDL C +CN+VK +++++ C+C+G F   +   D  S ++ F
Sbjct: 2114 IEERLINTLEKTITNFFVQDLKCEKCNRVKESNMSDYCSCSGQFVESQTKQDVSSSVETF 2173

Query: 1966 LNIANRQGFQLLQE 1979
              I+     +LL++
Sbjct: 2174 DRISAFYDLRLLKD 2187


>gi|389742512|gb|EIM83698.1| DUF1744-domain-containing protein [Stereum hirsutum FP-91666 SS1]
          Length = 2145

 Score = 1269 bits (3283), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 663/1424 (46%), Positives = 893/1424 (62%), Gaps = 97/1424 (6%)

Query: 54   LEDEDTRKVYSCIDLYFVSQDGSTFKSKYKFRPYFYAATKEKMEMDVEAYLRRRYESQIA 113
            ++D D     + +D YF+  DG  FK  Y + PYFY A    ME  +E +L ++YE  I 
Sbjct: 6    MKDPDWPGGKAAVDYYFIQDDGGMFKCTYFYEPYFYIACTNGMETIIEEWLIKKYEGVIC 65

Query: 114  DIEILEKEDLDLKNHLSGLHKSYLKISFDTVQQLMDVKKDLLHVVERNQAKFDAAEAYES 173
             I    KEDL   NHL G  + YL++ F  V  L+ V++D++ +   N AK  A +AY  
Sbjct: 66   RIVRERKEDLKQPNHLLGHRRLYLQLCFRNVSDLLAVRRDIVPLALANSAKRSAVDAYAE 125

Query: 174  ILTGKRE------------------QRP----QDFLDCIVDLREYDVPYHIRFAIDNDVR 211
            ++    +                   RP    +D  + I+D+REYDVPY++R A+DN++R
Sbjct: 126  VVNATADGGMSLDGDESWGGEASTSSRPIGHDRDPREGIIDVREYDVPYYLRTAMDNELR 185

Query: 212  CGQWYDVSISSTGPLLEKRVDLLQRAEVHVCAFDIETTKLPLKFPDADYDIIMMISYMLD 271
             G WY V+ ++  P   +  + ++R +  V A+DIETTK PLKFPD   D +MMISYM+D
Sbjct: 186  VGMWYGVTFNAGQPEFVQITERVKRPDPVVMAYDIETTKAPLKFPDQAIDQVMMISYMVD 245

Query: 272  GQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNVNNEIELLRLWFAHMQEVKPGIYVT 331
            GQGYLI NRE V EDI+D EYTPK  +EG F + N  +E   +R +F H+QEVKP +  T
Sbjct: 246  GQGYLITNREIVSEDIDDFEYTPKEGYEGPFIIFNEADEAATIRRFFQHIQEVKPTVMAT 305

Query: 332  YNGDYFDWPFLETRAAHHGFKMSEELGFQCDKNQGECRAKFACHLDCFAWVKRDSYLPQG 391
            +NGD+FD+PFL  RA  H   M  E+GF  D ++ E +++   H+DCF WVKRDSYLPQG
Sbjct: 306  FNGDFFDFPFLCARAQTHDIDMFLEIGFAKD-SEDEFKSRTCVHMDCFRWVKRDSYLPQG 364

Query: 392  SQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQMMASYSVSDAVATYYLYMTYVHPFIFS 451
            SQGLKAVT AKLGY+P+E++PE M  +A E+PQ++A YSVSDAVATYYLYM YVHPFIFS
Sbjct: 365  SQGLKAVTVAKLGYNPIELDPELMTPYAMEQPQVLAQYSVSDAVATYYLYMKYVHPFIFS 424

Query: 452  LATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVICPNKHQSDPEKFYRNHLLESETYIG 511
            L  +IP+ PDEVLRKG+GTLCE LLMV+A++ ++I PN+H+ +    Y+ HLL SETY+G
Sbjct: 425  LCNVIPLCPDEVLRKGTGTLCETLLMVEAFRGHIIMPNRHEEEHGNMYQGHLLASETYVG 484

Query: 512  GHVECLESGVFRSDLPTSFKLDPSAYEQLLNNLDRDLQYAIKVEGKMDLESVSNYDEVKN 571
            GHVE LE+GVFRSD+ T FK+ PSA ++L++ LD  L + I  E K  ++ V+NYDEVK 
Sbjct: 485  GHVEALEAGVFRSDIETDFKIVPSAAQKLIDELDAALTFCITDESKCSMDDVTNYDEVKQ 544

Query: 572  AIMEKLLRLQEEPIREECPLIYHLDVAAMYPNIILTNRLQPPSIVTDEVCTACDFNRPGK 631
             I   L  +++    +  PLIYHLDVAAMYPNI+L+NRLQP S+V +  C  CD+NRPGK
Sbjct: 545  QIQTALEFMRDNTSLQAKPLIYHLDVAAMYPNIMLSNRLQPDSVVDEAACAVCDYNRPGK 604

Query: 632  TCLRKLEWVWRGEIFMGKRSDYYHLKKQIESE-FVDGTNGHLSKSFLDLPKMEQQSRLKD 690
            TC R+L W WRGE F  +R ++  +K  +  E F     G   + F DL   EQ + L  
Sbjct: 605  TCDRRLTWAWRGEFFPARRDEFNMIKHALNQETFPPKRVGLPPRRFPDLSPSEQTALLHK 664

Query: 691  RLKKYCQKAYKRVLDKPVTELREAGICMRENSFYVDTVRSFRDRRYEYKGLNKVWKGKLS 750
            RL  Y +K YK++ D  V E RE  IC REN FYVDTVR FRDRRYEYKGL+K WK  L 
Sbjct: 665  RLGDYSRKVYKKIKDTKV-ENRETIICQRENPFYVDTVRRFRDRRYEYKGLHKTWKKNLD 723

Query: 751  EAKASGNSI-KIQEAQDMVVLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTG 809
                 G S+ ++ EA+ ++V+YDSLQLAHKCILNSFYGYVMRKGARW+SMEMAGV   TG
Sbjct: 724  NILGEGRSLAEVDEAKKLIVVYDSLQLAHKCILNSFYGYVMRKGARWHSMEMAGVTCLTG 783

Query: 810  AKIIQNARLLIEKIGKPLELDTDGIWCVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVD 869
            A IIQ AR L+E++G+PLELDTDGIWC+LPG FPENF FK  +  K +  SYPC MLN  
Sbjct: 784  ATIIQMARQLVEQVGRPLELDTDGIWCMLPGCFPENFKFKLTN-GKSIGFSYPCTMLNHL 842

Query: 870  VARNNTNDQYQTLVDPVSKTYETHSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFN 929
            V    TN QY  L D  S  Y+ HSE SI FE+DGPY+AMILP+SKEE  L+KKRYAVFN
Sbjct: 843  VHDQFTNHQYHDL-DLESGEYKVHSENSIFFELDGPYRAMILPSSKEEDKLLKKRYAVFN 901

Query: 930  DDGTLAELKGFEIKRRGELKLIKVFQAELFDKFLHGSTIEECYSAVAAVANRWLDLLDNQ 989
            DDGTLAELKGFE+KRRGEL+LIK+FQ+++F+KFL G+T ++CY+AVA VA++WLD+L ++
Sbjct: 902  DDGTLAELKGFEVKRRGELQLIKIFQSQIFEKFLLGTTTQQCYAAVAEVADQWLDVLFSK 961

Query: 990  GKDIADSELIDYISESSTMSKSLADYGEQKSCAVTTARRLSDFLGDTMVKDKGLRCQYIV 1049
              D+ D EL++ I+E+ +MSK+LA+YG QKS +++TA+RL++FLGD MVKDKGL C++I+
Sbjct: 962  AADLTDEELVELIAENRSMSKTLAEYGGQKSTSISTAKRLAEFLGDQMVKDKGLACKFII 1021

Query: 1050 ACEPQGTPVSERAVPVAIFETDAEIMKFYLRKWCKTS--SDVGIRSIVDWSYYKQRLSSA 1107
            +  P G PV++RAVPVAIF  +  + + YLRKW K +  ++  +RSI+DW YY +RL S 
Sbjct: 1022 SARPLGMPVTDRAVPVAIFSAEESVKRMYLRKWLKDNGLTNFDLRSILDWDYYIERLGSV 1081

Query: 1108 IQKIITIPAAMQKVSNPVPRVVHPDWLYKKVREKEDKFRQRKLVDIFSSLKKDDFLNKTC 1167
            IQK+ITIPAAMQKV NPVPRV HPDWL+++V    D FRQ K+ D F   K  +  ++  
Sbjct: 1082 IQKLITIPAAMQKVPNPVPRVRHPDWLHRRVAALGDTFRQHKMTDFFK--KPGEIADQPT 1139

Query: 1168 NAETNLMDENVEDLEDFPKKRRNSVNGPRPIVRCFEVNNEQKTVKTTDQVDSLRQQLEPS 1227
              +T    +++ED+ D     R+S    RP +       ++K V+  D    L    +PS
Sbjct: 1140 QTQT----QDIEDIGD--SGDRSS----RPRIAVVNRKLKRKVVEDADTPKRLPPPPDPS 1189

Query: 1228 EVSDQQPSSQNAIDTENIDRIVDYKGWLELKKRKWKDNLDRRKKQKLGSLRASHQANGVS 1287
            +                      Y  W+   + +WK                        
Sbjct: 1190 K---------------------SYSSWIRAMRPRWKQR---------------------- 1206

Query: 1288 ESLGDMINHKEAQRRTGVGSYFRRQETAMTRCHWQIIQLVPSSQSGVFLAWVVVEGIMVR 1347
                             + + FR      T   W ++QL P+S  G F  W+ V   +V 
Sbjct: 1207 -----RAARTADPAAANMPAMFRGVAQMKTSSRWDVVQLRPTSTPGRFNLWLQVNTELVA 1261

Query: 1348 IPITVPRLFYLNSKDPIVEK------FPGRRVNKTLPHGRRSFNLIEVMIDEDQFRKESK 1401
            +P+ +PR FY++ +    E       +   +V K LP      NL +V + ED + +E +
Sbjct: 1262 LPVRIPREFYVHMRSAPPEDLFQPELYSCDKVVKNLPRNTPCLNLYKVSVREDTYVEEQE 1321

Query: 1402 KLAALLADPEVE-VLGWQQNAAKIGMQRCAASSQWFNERISLAR 1444
                L  +P V+ V   Q      G+ +   + Q  +  ++L R
Sbjct: 1322 HFVDLTNNPNVDGVFELQVPLVVRGLLKLGKTCQTKDNVMTLNR 1365



 Score =  301 bits (770), Expect = 3e-78,   Method: Compositional matrix adjust.
 Identities = 193/614 (31%), Positives = 302/614 (49%), Gaps = 53/614 (8%)

Query: 1412 VEVLGWQQNAAKIGMQRCAASSQWFNERISLARY-----AHI------------------ 1448
            ++V  WQ N A   + R  +   W +  ++LA Y      HI                  
Sbjct: 1531 LDVFPWQSNVAHKMLSRYISLGSWMDRMVALAEYYDVPVGHIDGDQPLFLSDLEFARRLI 1590

Query: 1449 -----LWISDDGVPDLGGTSEEDECFADEVHQPVLTYPGAYRKVSVELKIHHLSVNALLK 1503
                 LW S  G PDLGG  E D+ + +E+       PG Y  VS+E+ + +L+VN++L 
Sbjct: 1591 SQDCVLWWSPSGSPDLGGM-EGDQRYTEELPHTEFKSPGCYSNVSLEITVRNLAVNSVLH 1649

Query: 1504 SNQVNEMEG-GGLFGFDQ------DMNSGPYNNELCGFDETTSSAPAFRVVKQLIQRCLT 1556
            S  VNE+EG GG   FD       +   G    +L    E   S   F ++K +++  L 
Sbjct: 1650 SVVVNELEGSGGTTAFDSVSHTIDEFKDGEAQRDLT-LGEANISPQTFGIMKSIVKGWLL 1708

Query: 1557 DAVTSG-NVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEFRKLGATI 1615
            D +  G    A   + H +RW+ S  S L+DP +HR ++ +M+K F  LLAEF++LG+ +
Sbjct: 1709 DKIRHGVESPASLTIDHFWRWVTSKSSHLYDPSIHRFIYGLMRKTFIQLLAEFKRLGSHV 1768

Query: 1616 IFANFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLFMDQYNYG 1675
            ++A+FS++++ T K     A AY   L  A+ + ELF+ I L+   F+  LLFMDQ N G
Sbjct: 1769 VYADFSRILLVTSK-PPGTAHAYATYLTTAVSSNELFQHIFLQTERFYDFLLFMDQANLG 1827

Query: 1676 GIPARADESLDDDSQVDIVSSWNIAEYLPKEIQDHFVLVVSEFMYIPWKHAQKL-AASRA 1734
            G+      ++     V I   WNI +YLP  IQ  F   V  F+   +K  QK   +SR 
Sbjct: 1828 GVVCEDPLAVVPSRDVSINMQWNIQKYLPPAIQRDFADFVRYFLVELYKARQKSNESSRG 1887

Query: 1735 SLQEGSSCTPSITVAAAENFESHIVQYVKGEISSYFTGKLLSIVRDAIHHMKKMNNDQHN 1794
             L+   +  P  T    +   S  V  VK  I+   T KL   +       +  + D+  
Sbjct: 1888 PLRVLENGAPDAT--QKDTSRSKEVDSVKEFIARKLTRKLFKYIDSVQTRHRAASADEEL 1945

Query: 1795 SPGV---MQTAANIHKVDAPLEFIKHVCAAFALDQNVQHDVLVMRKNLLKYVRVREFAPE 1851
            S      +   + +  VD  LEFIK  CA   L ++ Q ++ ++++N L+ + V+ F   
Sbjct: 1946 SVDFEFPLLPGSYLRLVDPTLEFIKFACAVLELAKDFQSEIGLLKRNALELIGVKSFNER 2005

Query: 1852 AEFRDPCPSFILPNVICSYCNDCRDLDLCRDMALLAQD------WHCAMPQCGQPYDREV 1905
            A FR+PC    L NV C +C+  RD D CRDM LL  +      W CA+  CG  YDR  
Sbjct: 2006 AVFRNPCEPLKLSNVPCRHCDALRDFDFCRDMDLLPNNLEVSPKWLCAV--CGGEYDRTA 2063

Query: 1906 MENALLQIVRQRERLYHLQDLVCIRCNQVKAAHLAEQCACAGSFRCKEDASDFRSKMQIF 1965
            +E  L+++V   E+ +  QDL C +C QV++ +++  C+C+G+++     +D R K++  
Sbjct: 2064 IELELMEMVHALEQTFAQQDLKCGKCKQVRSDNVSRICSCSGTYQPTLSKADVRRKLRTI 2123

Query: 1966 LNIANRQGFQLLQE 1979
            +N+A       L+E
Sbjct: 2124 VNVAIVHNLGRLKE 2137


>gi|297734822|emb|CBI17056.3| unnamed protein product [Vitis vinifera]
          Length = 2723

 Score = 1268 bits (3282), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 624/813 (76%), Positives = 678/813 (83%), Gaps = 80/813 (9%)

Query: 608  NRLQPPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYYHLKKQIESEFVDG 667
            +R +P SIV+DE+CTACDFNRPGK CLRKLEWVWRGE FM K+SDYYHLK+QIESE VDG
Sbjct: 1084 DRAEPSSIVSDEICTACDFNRPGKNCLRKLEWVWRGEAFMAKKSDYYHLKRQIESELVDG 1143

Query: 668  TNGHLSKSFLDLPKMEQQSRLKDRLKKYCQKAYKRVLDKPVTELREAGICMRENSFYVDT 727
             +   SKSF+DLPK EQQ +LK+RLKKYCQKAYKRVLDKP TELREAGICMRENSFY+DT
Sbjct: 1144 GDSRFSKSFIDLPKTEQQLKLKERLKKYCQKAYKRVLDKPATELREAGICMRENSFYIDT 1203

Query: 728  VRSFRDRRYEYKGLNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHKCILNSFYG 787
            VRSFRDRRYEYKGLNKVWKGKLSEAKASGNSI+IQEAQDMVVLYDSLQLAHKCILNSFYG
Sbjct: 1204 VRSFRDRRYEYKGLNKVWKGKLSEAKASGNSIRIQEAQDMVVLYDSLQLAHKCILNSFYG 1263

Query: 788  YVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLPGSFPENFT 847
            YVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIG+PLELDTDGIWCVLPGSFPENFT
Sbjct: 1264 YVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGRPLELDTDGIWCVLPGSFPENFT 1323

Query: 848  FKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEFEVDGPYK 907
            F+TKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDP++KTY THSECSIEFEVDGPYK
Sbjct: 1324 FRTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPINKTYATHSECSIEFEVDGPYK 1383

Query: 908  AMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFLHGST 967
            AMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFLHGST
Sbjct: 1384 AMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFLHGST 1443

Query: 968  IEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLADYGEQKSCAVTTAR 1027
            +EECY+AVA+VANRWLDLLDNQGKDI DSEL+DYISESSTMSKSLADYGEQKSCAVTTAR
Sbjct: 1444 LEECYAAVASVANRWLDLLDNQGKDIVDSELLDYISESSTMSKSLADYGEQKSCAVTTAR 1503

Query: 1028 RLSDFLGDTMVKDKGLRCQYIVACEPQGTPVSERAVPVAIFETDAEIMKFYLRKWCKTSS 1087
            RL+DFLGDTMVKDKGLRCQYIVACEP+GTPVSERAVPVAIFETDAEIMKFY+RKWCK SS
Sbjct: 1504 RLADFLGDTMVKDKGLRCQYIVACEPRGTPVSERAVPVAIFETDAEIMKFYVRKWCKISS 1563

Query: 1088 DVGIRSIVDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLYKKVREKEDKFRQ 1147
            DVGIRSIVDWSYYKQRL SAIQKIITIPAAMQKV+NPVPRVVHPDWLYKKVREKE+KFRQ
Sbjct: 1564 DVGIRSIVDWSYYKQRLGSAIQKIITIPAAMQKVANPVPRVVHPDWLYKKVREKEEKFRQ 1623

Query: 1148 RKLVDIFSSLKKDDFLNKTCNAETNLMDENVEDLEDFPKKRRNSVNGPRPIVRCFEVNNE 1207
            RKLVD+F S                                  S  GPRPIV        
Sbjct: 1624 RKLVDMFGS---------------------------------TSSAGPRPIV-------- 1642

Query: 1208 QKTVKTTDQVDSLRQQLEPSEVSDQQPSSQNAIDTENIDRIVDYKGWLELKKRKWKDNLD 1267
                +  +  +S    ++P+++S           T+NIDR VDY+GWLE+KKRKWKD  +
Sbjct: 1643 ----QPANHSESALTPMQPTDIS-----------TDNIDRNVDYQGWLEMKKRKWKDARE 1687

Query: 1268 RRKKQKL-------GSLRASHQANGVSESLGDMINHKEAQRRTGVGSYFRRQETAMTRCH 1320
            +RK+Q+L         L  +  A G                 TGV SYFRR E A+T  +
Sbjct: 1688 KRKRQRLLDDHIFLTFLVPAFLALG-----------------TGVNSYFRRHELALTHSY 1730

Query: 1321 WQIIQLVPSSQSGVFLAWVVVEGIMVRIPITVPRLFYLNSKDPIVEKFPGRRVNKTLPHG 1380
            WQIIQL PSSQ G F AWV+VEG+M++IPITVPR+FYLNSK  I E+FPGRRVNKTLPHG
Sbjct: 1731 WQIIQLAPSSQHGQFFAWVIVEGVMLKIPITVPRVFYLNSKALITEEFPGRRVNKTLPHG 1790

Query: 1381 RRSFNLIEVMIDEDQFRKESKKLAALLADPEVE 1413
              S+NLIE++IDEDQFR ES+KLAA LADPEVE
Sbjct: 1791 HHSYNLIEIIIDEDQFRGESRKLAAHLADPEVE 1823



 Score =  961 bits (2484), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 472/597 (79%), Positives = 504/597 (84%), Gaps = 62/597 (10%)

Query: 4   RRWDRQDGRRTKKQKLIRSAEEELEAKLGYDLFSEGDKRLGWLLTFASSSLEDEDTRKVY 63
           RR DR D  + KKQKLIR+AEEE+E+KLG DLFSEG+KRLGWLLTFASSS EDE+T KVY
Sbjct: 6   RRRDRADVWKHKKQKLIRNAEEEVESKLGLDLFSEGEKRLGWLLTFASSSWEDEETHKVY 65

Query: 64  SCIDLYFVSQDGSTFKSKYKFRPYFYAATKEKMEMDVEAYLRRRYESQIADIEILEKEDL 123
           SC+DLYFVSQDGS+FKSKYKFRPYFYAATK+KMEMDVEAYLRRRYE QIADIEI+ KEDL
Sbjct: 66  SCVDLYFVSQDGSSFKSKYKFRPYFYAATKDKMEMDVEAYLRRRYEGQIADIEIMYKEDL 125

Query: 124 DLKNHLSGLHKSYLKISFDTVQQLMDVKKDLLHVVERNQAKFDAAEAYESILTGKR---- 179
           DLKNHLSGL KSYLKISFD VQQLM VK DLLHVVERN+AKFDAAEAYESILTGKR    
Sbjct: 126 DLKNHLSGLCKSYLKISFDNVQQLMHVKSDLLHVVERNRAKFDAAEAYESILTGKRYGSI 185

Query: 180 -----EQRPQDFLDCIVDLREYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLLEKRVDLL 234
                E+    F+D IVDLREYDVPYH+RFAID DVRCGQWYDV++SS G +LE+R DLL
Sbjct: 186 IAAPAEKAFLYFIDYIVDLREYDVPYHVRFAIDKDVRCGQWYDVNVSSAGVMLERRTDLL 245

Query: 235 QRAEVHVCAFDIETTKLPLKFPDADYDIIMMISYMLDGQGYLIINRE------------- 281
           QRAEVHVCAFDIETTKLPLKFPDA+YD++MMISYM+DGQGYLIINRE             
Sbjct: 246 QRAEVHVCAFDIETTKLPLKFPDAEYDLVMMISYMVDGQGYLIINREVLIIDLIIFTCFR 305

Query: 282 ----------------------------------CVGEDIEDLEYTPKPEFEGYFKVTNV 307
                                             CVGEDIE+LEYTPKPEFEG FKVTNV
Sbjct: 306 MAVFFFCSSLWLLETCNCVLKMGSNYSIALHLFQCVGEDIEELEYTPKPEFEGCFKVTNV 365

Query: 308 NNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDKNQGE 367
            NE ELLR+WFAHM+EVKPGIYVTYNGD+FDWPFLE+RAAHHG KMS+E+GFQCDKNQGE
Sbjct: 366 KNEKELLRMWFAHMREVKPGIYVTYNGDFFDWPFLESRAAHHGLKMSDEVGFQCDKNQGE 425

Query: 368 CRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQMMA 427
           CRAKF+CHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKE PQMMA
Sbjct: 426 CRAKFSCHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKELPQMMA 485

Query: 428 SYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQ------AY 481
           SYSVSDAV+TYYLYMTYVHPFIFSLATIIPM PDEVLRKGSGTLCEMLLMVQ      AY
Sbjct: 486 SYSVSDAVSTYYLYMTYVHPFIFSLATIIPMPPDEVLRKGSGTLCEMLLMVQVGSLVHAY 545

Query: 482 KANVICPNKHQSDPEKFYRNHLLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYE 538
           KANVICPNKHQSDPEKFY N LLESETYIGGHVECLESGVFRSDLPTSFKLDPS+YE
Sbjct: 546 KANVICPNKHQSDPEKFYHNQLLESETYIGGHVECLESGVFRSDLPTSFKLDPSSYE 602



 Score =  956 bits (2472), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 465/624 (74%), Positives = 509/624 (81%), Gaps = 57/624 (9%)

Query: 1409 DPEVEVLGWQQNAAKIGMQRCAASSQWFNERISLARYAHI-------------------- 1448
            D   + LGWQ  AAKIGMQRCAA++QW NERISLARYAH+                    
Sbjct: 2113 DSHYQALGWQIVAAKIGMQRCAAATQWLNERISLARYAHVPLGNFEPDWLIFTADLFFSR 2172

Query: 1449 --------LWISDDGVPDLGGTSEEDECFADEVHQPVLTYPGAYRKVSVELKIHHLSVNA 1500
                    LWISD+G+PDLGG +EED CFADEVHQPVLTYPGAYRKVSVELKIHHL+VNA
Sbjct: 2173 ALRDQQQVLWISDNGIPDLGGLNEEDTCFADEVHQPVLTYPGAYRKVSVELKIHHLAVNA 2232

Query: 1501 LLKSNQVNEMEGGGLFGFDQDMNSGPYN-NELCGFDETTSSAPAFRVVKQLIQRCLTDAV 1559
            LLKSNQVNEMEGG LFGF+QDMN G +  NE CGFDE T  AP FRV+KQLIQRCL DAV
Sbjct: 2233 LLKSNQVNEMEGGALFGFEQDMNMGAHGFNEQCGFDEATLCAPTFRVLKQLIQRCLADAV 2292

Query: 1560 TSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEFRKLGATIIFAN 1619
            +SGNVFADAILQHLYRWL SP SKLHDP LHRILHKVMQKVFA+LLAEFRKLGATI+FAN
Sbjct: 2293 SSGNVFADAILQHLYRWLYSPQSKLHDPALHRILHKVMQKVFALLLAEFRKLGATIVFAN 2352

Query: 1620 FSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLFMDQYNYGGIPA 1679
            FSKVIIDTGK DLSAAKAYCDSLLK LQTR+LFEWIE+EP+HFWHSLLFMDQYNYGG+ A
Sbjct: 2353 FSKVIIDTGKSDLSAAKAYCDSLLKTLQTRDLFEWIEIEPLHFWHSLLFMDQYNYGGVQA 2412

Query: 1680 RA------------DESLDDDSQVDIVSSWNIAEYLPKEIQDHFVLVVSEFMYIPWKHAQ 1727
            R+             ES++D+SQVDIVSSWNIAE LPK IQDHFVL+VSEFMY PWK+A+
Sbjct: 2413 RSHGGSLIGSSDPTSESIEDESQVDIVSSWNIAEQLPKTIQDHFVLIVSEFMYTPWKYAR 2472

Query: 1728 KLAASRASLQEGSSCTPSITVAAAENFESHIVQYVKGEISSYFTGKLLSIVRDAIHHMKK 1787
            + AA+RAS + G SCTPSIT AAAE FESHI +Y+K +ISSYF  KLL IVRD + HMK 
Sbjct: 2473 EQAANRASARNGDSCTPSITAAAAEVFESHITEYLKEQISSYFADKLLRIVRDTVLHMKG 2532

Query: 1788 MN---NDQHNSPGVMQTAANIHKVDAPLEFIKHVCAAFALDQNVQHDVLVMRKNLLKYVR 1844
            MN   NDQH               DA LEFIKHVCA  ALDQNVQHD+LVMRKNLLKYV 
Sbjct: 2533 MNRSENDQHTG-------------DAALEFIKHVCAVLALDQNVQHDILVMRKNLLKYVH 2579

Query: 1845 VREFAPEAEFRDPCPSFILPNVICSYCNDCRDLDLCRDMALLAQDWHCAMPQCGQPYDRE 1904
            VREFAPEAEF DPC SFILPNVICSYCNDCRDLDLCRD ALLAQ+W CA+PQCGQPYDRE
Sbjct: 2580 VREFAPEAEFCDPCQSFILPNVICSYCNDCRDLDLCRDSALLAQEWRCAVPQCGQPYDRE 2639

Query: 1905 VMENALLQIVRQRERLYHLQDLVCIRCNQVKAAHLAEQCACAGSFRCKEDASDFRSKMQI 1964
            VMENALLQIVRQRERLYH+QDLVC++CNQVKAAHLAEQC+CAGSFRCKED S+F+SKMQ+
Sbjct: 2640 VMENALLQIVRQRERLYHVQDLVCLKCNQVKAAHLAEQCSCAGSFRCKEDVSEFQSKMQV 2699

Query: 1965 FLNIANRQGFQLLQECTSWILEVQ 1988
            FL IA  Q FQLLQECTSWILE++
Sbjct: 2700 FLKIAMLQKFQLLQECTSWILEIR 2723



 Score =  108 bits (269), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 52/58 (89%), Positives = 55/58 (94%)

Query: 554 VEGKMDLESVSNYDEVKNAIMEKLLRLQEEPIREECPLIYHLDVAAMYPNIILTNRLQ 611
           VEGKMD+ESVSNYDEVKNAI EKL++LQ EPIREE PLIYHLDVAAMYPNIILTNRLQ
Sbjct: 702 VEGKMDVESVSNYDEVKNAIKEKLMKLQGEPIREEFPLIYHLDVAAMYPNIILTNRLQ 759


>gi|254584692|ref|XP_002497914.1| ZYRO0F16412p [Zygosaccharomyces rouxii]
 gi|186703700|emb|CAQ43393.1| DNA polymerase epsilon catalytic subunit A [Zygosaccharomyces rouxii]
 gi|238940807|emb|CAR28981.1| ZYRO0F16412p [Zygosaccharomyces rouxii]
          Length = 2194

 Score = 1264 bits (3272), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 658/1393 (47%), Positives = 902/1393 (64%), Gaps = 78/1393 (5%)

Query: 42   RLGWLLTFASSSLEDED-TRKV-----YSCIDLYFVSQDGSTFKSKYKFRPYFYAATKEK 95
            R+GWL+    +++  E  T K       S +D YF+ ++G +FKS   + PYF+    + 
Sbjct: 59   RVGWLINMHPTTVTSESMTGKSEFAGGISAVDYYFLDEEGGSFKSTVSYDPYFFVKCSDD 118

Query: 96   MEM-DVEAYLRRRYESQIADIEILEKEDLDLKNHLSGLHKSYLKISFDTVQQLMDVKKDL 154
              + +VE +L++  ES + ++ +++++DL + NHL GL +S +K++F    QL + +K L
Sbjct: 119  YRVQEVEEFLKKYLESCVKEVSVVQRKDLKMDNHLVGLERSLVKLTFINSNQLFEARKLL 178

Query: 155  LHVVERNQAKFDAAEAYESILTGKREQRPQDFLDCIVDLREYDVPYHIRFAIDNDVRCGQ 214
              ++ +N+        Y   +  +   + +D    I D+RE+DVPYH+R +ID D+R G+
Sbjct: 179  RPILAQNENNKVQKNTYRVHVPHRTSNKFEDAKALIEDIREHDVPYHVRVSIDKDIRVGK 238

Query: 215  WYDVSISSTGPLLEKRVDLLQRAEVHVCAFDIETTKLPLKFPDADYDIIMMISYMLDGQG 274
            WY V+ +      EK    +  A+  V AFDIETTK PLKFPD+  D IMMISYM+DG G
Sbjct: 239  WYKVTSAGFFECAEK----VAFADPVVLAFDIETTKAPLKFPDSSTDQIMMISYMIDGDG 294

Query: 275  YLIINRECVGEDIEDLEYTPKPEFEGYFKVTNVNNEIELLRLWFAHMQEVKPGIYVTYNG 334
            +LI NRE + EDIED EY+P  EF G F + N  +E+ LL+ +F H+++V+P +  T+NG
Sbjct: 295  FLITNREIISEDIEDFEYSPTQEFLGNFAIFNEADELSLLQRFFEHIRDVRPSVIATFNG 354

Query: 335  DYFDWPFLETRAAHHGFKMSEELGFQCDKNQGECRAKFACHLDCFAWVKRDSYLPQGSQG 394
            D+FDWPF++ RA  +G  M EE+GF  D  +GE ++ +  H+DCF WVKRDSYLPQGSQG
Sbjct: 355  DFFDWPFVDNRAKINGLDMYEEIGFAPDA-EGEYKSPYCSHMDCFRWVKRDSYLPQGSQG 413

Query: 395  LKAVTKAKLGYDPLEVNPEDMVRFAKEKPQMMASYSVSDAVATYYLYMTYVHPFIFSLAT 454
            LKAVT+AKLGY+P+E++PE M  +A EKPQ ++ YSVSDAVATYYLYM YVHPFIFSL T
Sbjct: 414  LKAVTQAKLGYNPIELDPELMTPYAFEKPQQLSEYSVSDAVATYYLYMKYVHPFIFSLCT 473

Query: 455  IIPMSPDEVLRKGSGTLCEMLLMVQAYKANVICPNKHQSDPEKFYRNHLLESETYIGGHV 514
            IIP++PDEVLRKG+GTLCEMLL VQAYK N++ PNK+    E+FY  HLLESETY+GGHV
Sbjct: 474  IIPLNPDEVLRKGTGTLCEMLLTVQAYKGNILLPNKYTDPIERFYDGHLLESETYVGGHV 533

Query: 515  ECLESGVFRSDLPTSFKLDPSAYEQLLNNLDRDLQYAIKVEGKMDLESVSNYDEVKNAIM 574
            E LE+GVFR D+   F +DP A + LL  L   L++ I+VE K  ++ ++NY +V++ I 
Sbjct: 534  ESLEAGVFRKDIKNHFNIDPEAIDNLLEELPHALKFCIEVENKTPMDKITNYQQVEDEIR 593

Query: 575  EKLLRLQEEPIREECPLIYHLDVAAMYPNIILTNRLQPPSIVTDEVCTACDFNRPGKTCL 634
             KLL L+    R E PLIYH+DVA+MYPNI+++NRLQP S+ T+  C +CDFNRPGK C 
Sbjct: 594  SKLLDLKHNNKRHEYPLIYHVDVASMYPNIMISNRLQPDSMKTERDCASCDFNRPGKNCD 653

Query: 635  RKLEWVWRGEIFMGKRSDYYHLKKQIESEFVDGTNGHLSKSFL---DLPKMEQQSRLKDR 691
            R+++W WRGE F  K  +Y  +K+ +++E     N    K FL   +L   +Q S +K R
Sbjct: 654  RRMKWAWRGEFFPAKMDEYNMIKRALQNETFPNPNKMSKKQFLTFDELSYAQQVSHIKKR 713

Query: 692  LKKYCQKAYKRVLDKPVTELREAGICMRENSFYVDTVRSFRDRRYEYKGLNKVWKGKLSE 751
            L  Y +K Y R+    V E REA IC REN FY +TVR+FRDRRYE+KGL K WK K S 
Sbjct: 714  LTDYSKKNYHRIKASEVVE-REAIICQRENPFYANTVRAFRDRRYEFKGLVKKWKNKKSS 772

Query: 752  AKASGNSIKIQEAQDMVVLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAK 811
               S    +  E+Q MV+LYDSLQLAHK ILNSFYGYVMRKG+RWYSMEMAG+   TGA 
Sbjct: 773  LDKSDKHGR-DESQKMVILYDSLQLAHKVILNSFYGYVMRKGSRWYSMEMAGITCLTGAT 831

Query: 812  IIQNARLLIEKIGKPLELDTDGIWCVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVA 871
            +IQ AR L+E++G PLELDTDGIWC +P SFP+ F F T +  KKL++SYPC MLN  V 
Sbjct: 832  LIQMARSLVERLGIPLELDTDGIWCTIPQSFPDEFKF-TLENGKKLSLSYPCSMLNYRVH 890

Query: 872  RNNTNDQYQTLVDPVSKTYETHSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDD 931
            +  TN QYQ LVDP +  YET SE SI FE+DGPY+AM+LP SKEEG  IKKRYAVFNDD
Sbjct: 891  QKFTNHQYQNLVDPANYKYETLSENSIFFELDGPYRAMVLPTSKEEGKGIKKRYAVFNDD 950

Query: 932  GTLAELKGFEIKRRGELKLIKVFQAELFDKFLHGSTIEECYSAVAAVANRWLDLLDNQGK 991
            G+LAELKGFE+KRRGEL+LIK FQ +LF  FL G T+E CY+AV  +ANRWLD+LD +G 
Sbjct: 951  GSLAELKGFELKRRGELQLIKNFQGDLFKVFLEGDTLENCYAAVGKIANRWLDILDYKGS 1010

Query: 992  DIADSELIDYISESSTMSKSLADYGEQKSCAVTTARRLSDFLGDTMVKDKGLRCQYIVAC 1051
             + D +L+D I E+ +MSK+L +YG QKS ++TTARRL +FLG+ MVKDKGL+C+Y+++ 
Sbjct: 1011 MLEDEDLVDLICENKSMSKTLKEYGGQKSTSITTARRLGEFLGEEMVKDKGLQCKYVISA 1070

Query: 1052 EPQGTPVSERAVPVAIFETDAEIMKFYLRKWCKTSS--DVGIRSIVDWSYYKQRLSSAIQ 1109
            +P  TPV++RA+PVAIF  +  + + +LR+W    S  D  +R+I+DW YY++R++S IQ
Sbjct: 1071 KPFNTPVTDRAIPVAIFLAETSVKRSFLRRWTMDMSLEDFDLRNILDWGYYRERVASVIQ 1130

Query: 1110 KIITIPAAMQKVSNPVPRVVHPDWLYKKVREKEDKFRQRKLVDIFSSLKKDDFLNKTCNA 1169
            KIITIPAA+Q + NPVPRV HP WL K++  + DKF+Q  L   F  +KKDD        
Sbjct: 1131 KIITIPAALQGIPNPVPRVEHPPWLQKRIAAQGDKFKQTSLNRFF--VKKDD-------- 1180

Query: 1170 ETNLMDENVEDLEDFPKKRRNSVNGPRPIVRCFEVNNEQKTVKTTDQVDSLRQQLEPSEV 1229
              +  +  V+D+ED       S  G +   +  +V+  +K  K        R++ E ++V
Sbjct: 1181 --SPANGRVKDIEDM----FTSKEGEQATRKVAKVSTAKKVSK--------RRRDESNQV 1226

Query: 1230 SDQ--QPSSQNAIDTENIDRIVDYKGWLELKKRKWKDNLDRRKKQKLGSLRASHQANGVS 1287
             +    P+   ++D        DY  WL  +K KWK     R ++              S
Sbjct: 1227 EEALVLPTEMPSMDE-------DYVAWLNYQKIKWKIQARDRARR--------------S 1265

Query: 1288 ESLGDMINHKEAQRRTGVGSYFRRQETAMTRCHWQIIQLVPSSQSGVFLAWVVVEGIMVR 1347
            +  G+  N  E   RT +GS  R+Q  +     W+I+Q  PS+Q GV   +V +   +  
Sbjct: 1266 QLFGESNNSVE---RTALGSMIRKQAESYADSTWEILQYKPSAQPGVLDVYVSINDKIQT 1322

Query: 1348 IPITVPRLFYLNSK-DPIVE-KF-PGRRVNKTLPHG-----RRSFNLIEVMIDEDQFRKE 1399
            +   +P+  Y   K  P  E K+    R N  LP+        S NL ++ + E+ F ++
Sbjct: 1323 LKFIIPKTIYAKFKMTPYAEMKYCVLERTNAVLPNSPEMKDTSSQNLYKITLPENVFLEQ 1382

Query: 1400 SKKLAALLADPEV 1412
             +   + L D  V
Sbjct: 1383 IEDSTSSLNDENV 1395



 Score =  172 bits (437), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 127/546 (23%), Positives = 251/546 (45%), Gaps = 22/546 (4%)

Query: 1442 LARYAHILWISDDG-VPDLGGTSEE----DECFADEVHQPVLTYPGAYRKVSVELKIHHL 1496
            L +   ++W +++  + D GG  ++         +++  PV+   G Y K  +E+++ +L
Sbjct: 1652 LKKEGMVMWWNENSPLADHGGVQKDYDPNTAWLQNDLEFPVINNVGVYDKAVLEIEMSNL 1711

Query: 1497 SVNALLKSNQVNEMEGGGLFGFDQDMNSG-PYNNELCGFDETTSSAPAFRVVKQLIQRCL 1555
            +VN +L S  + E EG  L   D + ++     + +  F +   S+ +  V++ +++   
Sbjct: 1712 TVNTVLGSALITEAEGCDLAEADAENDAALRATSSMGAFVQDAFSSGSLAVLRNMLKDWW 1771

Query: 1556 TDAVTSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEFRKLGATI 1615
             D+    N+ AD ++     W+  P SKL D  L   +H + +K    L+ EF  LG+T+
Sbjct: 1772 -DSALKDNMIADLLVNSFVNWVQDPDSKLFDNALRYHVHNLTKKSQLQLINEFYNLGSTV 1830

Query: 1616 IFANFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLFMDQYNYG 1675
            ++++ S++++ T K+      AY   ++KA++T   F +++L+   +W  L++MD YN+G
Sbjct: 1831 VYSDRSRLLVKTKKYSPETCYAYGQYIIKAIRTNPAFTYLDLKIDRYWDLLIWMDNYNFG 1890

Query: 1676 GIPARADESLDDDSQ-VDIVSSWNIAEYLPKEIQDHFVLVVSEFMYIPWKHAQKLAASRA 1734
            G+     E  D ++Q     S W+I  +LP   Q  F     ++M I      K      
Sbjct: 1891 GLACT--EIRDKETQDFRAYSQWHIRNFLPPIYQQEF----DDWMMIILDSMLKTKTQYL 1944

Query: 1735 SLQEGSSCTPSITVAAAENFESHIVQYVKGEISSYFTGKLLSIVRDAIHHMKK-MNNDQH 1793
              + G+     +     +N   +         +  F+G L+  V+    + ++ + N  +
Sbjct: 1945 ESKTGTQRLTQLHHLPQDNNPENEENGPLTNFTEIFSGPLIKRVQKLYRNQQEFILNPSY 2004

Query: 1794 NSPGVMQT--AANIHKVDAPLEFIKHVCAAFALDQNVQHDVLVMRKNLLKYVRVREFAPE 1851
             S         +N    +  LE +K++C    L +    +V  +RK LLK   VREF   
Sbjct: 2005 ASDYAFPVLPGSNTVSRNPLLELVKYLCHIMLLCKETILEVRSLRKTLLKIFEVREFDKS 2064

Query: 1852 AEFRDPCPSFILPNVICSYCNDCRDLDLCRDMALLAQDWHCAMPQCGQPYDREVMENALL 1911
            +EF DP    ++  ++C YC    ++D C+         H A  +C + +D  +++  L+
Sbjct: 2065 SEFTDPGSKLVISGLLCEYCFFMNNIDFCQ-----GGTTHFACAKCQRNFDHTLIQEHLI 2119

Query: 1912 QIVRQRERLYHLQDLVCIRCNQVKAAHLAEQCACAGSFRCKEDASDFRSKMQIFLNIANR 1971
              +      Y  QDL C RC++++   ++  C C+G +     +   +   +I+  +A  
Sbjct: 2120 YKLLAEIDSYLTQDLRCSRCHKIRQDLMSPHCDCSGKWEGTISSDQVQKSCKIYKQVAQF 2179

Query: 1972 QGFQLL 1977
              F LL
Sbjct: 2180 FDFDLL 2185


>gi|342319231|gb|EGU11181.1| DNA polymerase epsilon catalytic subunit A [Rhodotorula glutinis ATCC
            204091]
          Length = 2246

 Score = 1263 bits (3269), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 616/1172 (52%), Positives = 817/1172 (69%), Gaps = 46/1172 (3%)

Query: 25   EELEAKLGYDLFSEGDKRLGWLLTFASSSLEDEDTRKVYSCIDLYFVSQDGSTFKSKYKF 84
            +EL+ KLG+  F EG KR GWL+    + + DE      + +D YF+  DG  FK+   +
Sbjct: 64   DELDHKLGFAKFQEGAKRQGWLVNMKETLVPDETKTSARAGVDYYFIQDDGGMFKATLAY 123

Query: 85   RPYFYAATKEKMEMDVEAYLRRRYESQIADIEILEKEDLDLKNHLSGLHKSYLKISFDTV 144
             PYFY AT+   E  VE +L R+YE  I  +  + KEDL L NHL G  + Y+ +SF   
Sbjct: 124  EPYFYIATRSGYEGVVEEWLMRKYEDLITKVSRVRKEDLKLPNHLMGYRRDYISLSFRNQ 183

Query: 145  QQLMDVKKDLLHVVERNQAKFDAAEAYESILTGKRE------------------------ 180
              L  V++DLL +  +N+   DA + Y  ++ G+++                        
Sbjct: 184  TDLFTVRRDLLPLATKNREMLDAVDTYAEVVAGEQKFGQVGMEYDMEDGFGGEGFVKNVG 243

Query: 181  ------QRPQDFLDCIVDLREYDVPYHIRFAIDNDVRCGQWYDVSISS---TGPLLEKRV 231
                      D  D I+D+REYDVPY++R AID ++R G WY+V+  +   +  LLE+RV
Sbjct: 244  GAGGKGANAMDPKDAIIDIREYDVPYYLRVAIDKNIRVGLWYEVTADAGEISFRLLEERV 303

Query: 232  DLLQRAEVHVCAFDIETTKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLE 291
                RAE  V AFDIETTK PLKFPD   D +MMISYM+DGQG+LI NRE VG DIED E
Sbjct: 304  ---ARAEPVVMAFDIETTKAPLKFPDQLTDQVMMISYMIDGQGFLITNREIVGADIEDFE 360

Query: 292  YTPKPEFEGYFKVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGF 351
            YTPKP++EG F + N  +E   +  +F H +E +P +  TYNGD FD+PFL  RA  HG 
Sbjct: 361  YTPKPDYEGPFTIFNEADEAATILRFFEHFREARPTVCATYNGDSFDFPFLLARANVHGI 420

Query: 352  KMSEELGFQCDKNQGECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVN 411
             M +E+GF  D  + E +++   H+DCF WVKRDSYLPQGSQGLKAVT AKLGY+P+E++
Sbjct: 421  DMYKEIGFAKDSEE-EFKSRSCVHMDCFRWVKRDSYLPQGSQGLKAVTVAKLGYNPIELD 479

Query: 412  PEDMVRFAKEKPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTL 471
            PE M  +A ++PQ +A YSVSDAVATYYLYM YVHPF+FSL  IIP++PDEVLRKGSGTL
Sbjct: 480  PELMTPYAADQPQTLAQYSVSDAVATYYLYMKYVHPFVFSLCNIIPLNPDEVLRKGSGTL 539

Query: 472  CEMLLMVQAYKANVICPNKHQSDPEKFYRNHLLESETYIGGHVECLESGVFRSDLPTSFK 531
            CE LLMV+AY++NV+ PN+H       Y  HLLESETY+GGHVE LE+GVFRSD+ T FK
Sbjct: 540  CETLLMVEAYRSNVVYPNRHVESHNNMYDGHLLESETYVGGHVEALEAGVFRSDIETDFK 599

Query: 532  LDPSAYEQLLNNLDRDLQYAIKVEGK--MDLESVSNYDEVKNAIMEKLLRLQEEPIREEC 589
            + PSA ++L+++LD  L++A+  EGK  + +E V NYDEVK  I+  L  L++ P+R + 
Sbjct: 600  IVPSAIQELIDDLDDALKFALAKEGKKPIPIEDVENYDEVKGEIIRMLEELRDRPLRADT 659

Query: 590  PLIYHLDVAAMYPNIILTNRLQPPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEIFMGK 649
            PLIYHLDVAAMYPNI+L+NRLQP S+VT+  C ACDFNRPGK C R+++W WRGE F  +
Sbjct: 660  PLIYHLDVAAMYPNIMLSNRLQPDSVVTEADCAACDFNRPGKQCQRRMKWAWRGEYFPAQ 719

Query: 650  RSDYYHLKKQIESE-FVDGTNGHLSKSFLDLPKMEQQSRLKDRLKKYCQKAYKRVLDKPV 708
             ++Y  ++  +E E F     G   + F +L   EQ S L  RL  Y +K Y +  +  +
Sbjct: 720  LNEYKMIRNALEQETFPPKWPGKPERRFTELSPSEQTSLLHKRLGDYSRKVYAKTKETKI 779

Query: 709  TELREAGICMRENSFYVDTVRSFRDRRYEYKGLNKVWKGKLSEAKASGNSIKIQEAQDMV 768
             E +EA IC REN FY+DTVR+FRDRRY YKGL+K WK KL +A   G   +I EA+ M+
Sbjct: 780  -ETKEAIICQRENPFYIDTVRTFRDRRYTYKGLHKDWKKKLDQASGGGGVQEIVEAKAMI 838

Query: 769  VLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLE 828
            VLYDSLQLAHKCILNSFYGYVMRKGARW+SMEMAG+   TGA IIQ AR L+E+IG+PLE
Sbjct: 839  VLYDSLQLAHKCILNSFYGYVMRKGARWHSMEMAGITCLTGASIIQMARKLVEQIGRPLE 898

Query: 829  LDTDGIWCVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSK 888
            LDTDGIWC+LP +FP+ F FK +    K  ISYPC MLN  V ++ TNDQY         
Sbjct: 899  LDTDGIWCMLPSTFPDGFAFKLRG-GGKFPISYPCTMLNHIVHKDFTNDQYHEATP--DG 955

Query: 889  TYETHSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGEL 948
             +    E SI FE+DGPY+AMILP+SKEE  L+KKRYAVFN+DG+LAELKGFE+KRRGEL
Sbjct: 956  RHVVREENSIFFELDGPYRAMILPSSKEEDKLLKKRYAVFNEDGSLAELKGFEVKRRGEL 1015

Query: 949  KLIKVFQAELFDKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTM 1008
            +LIK FQ+++F+KFL G T+++CY+AVA VA++WLD+L  +   + D EL++ I+E+ +M
Sbjct: 1016 QLIKTFQSQIFEKFLLGGTLKDCYAAVATVADKWLDVLFTKAVSLPDDELVELIAENRSM 1075

Query: 1009 SKSLADYGEQKSCAVTTARRLSDFLGDTMVKDKGLRCQYIVACEPQGTPVSERAVPVAIF 1068
            SK+LA+Y  QKS +++TARRL++FLG+ MVKDKGL C++I++ +P G PV+ERAVPVAIF
Sbjct: 1076 SKTLAEYAGQKSTSISTARRLAEFLGEQMVKDKGLACKFIISTKPVGAPVTERAVPVAIF 1135

Query: 1069 ETDAEIMKFYLRKWCKTSS--DVGIRSIVDWSYYKQRLSSAIQKIITIPAAMQKVSNPVP 1126
              +  + + +LRKW K ++  +  +RSI+DW YY +RL S +QK+ITIPAA+QK+ NPVP
Sbjct: 1136 SAELSVKRHFLRKWLKDNALEEFDLRSILDWDYYIERLGSVVQKLITIPAALQKIPNPVP 1195

Query: 1127 RVVHPDWLYKKVREKEDKFRQRKLVDIFSSLK 1158
            R+ HPDWL+++V  ++DK +Q ++ ++F+  K
Sbjct: 1196 RIRHPDWLHRRVANQDDKIKQHRVDEMFARQK 1227



 Score =  297 bits (760), Expect = 4e-77,   Method: Compositional matrix adjust.
 Identities = 189/622 (30%), Positives = 307/622 (49%), Gaps = 65/622 (10%)

Query: 1415 LGWQQNAAKIGMQRCAASSQWFNERISLA----------------------------RYA 1446
            L WQ  A +  +Q    ++ W  ERI LA                            +  
Sbjct: 1630 LAWQAPACRRMIQHYLRAAVWIRERIELADRFDVPVCNLEKDVPLFLADIDFARRLSKAD 1689

Query: 1447 HILWISDDGVPDLGGTSEEDEC--FADEVHQPVLTYPGAYRKVSVELKIHHLSVNALLKS 1504
             +LW S    PDLGG   +       DE+  P L  PG Y    +E+++ +L+V+A+L+S
Sbjct: 1690 CVLWWSPAARPDLGGREADANASQLGDELINPELGKPGCYSNACLEVEVRNLAVDAVLQS 1749

Query: 1505 NQVNEMEGGGLFGFDQDMNSGPYNNELCGFDETTSSAP-----------AFRVVKQLIQR 1553
              V E+EGG   G D+  ++      L  + + T+ AP            F +V+ +++ 
Sbjct: 1750 ALVYELEGGEGGGIDEAAHN------LDDYAKGTAHAPHVLGDAILPTSTFNMVRAMVKA 1803

Query: 1554 CLTDAVTSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEFRKLGA 1613
               +A          +L H +RW  SP +KL+DP L+R +H +M+K F+ LLAEFR+LG+
Sbjct: 1804 WSVEAAKPDGAHWRLMLDHFWRWTSSPAAKLYDPALYRFVHGLMRKTFSQLLAEFRRLGS 1863

Query: 1614 TIIFANFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLFMDQYN 1673
             I+ A+F ++ + T K   S A AY + L+ ++ TRELF +++LE V FW  L++MD  N
Sbjct: 1864 DIVHADFGRIFLLTSKPSSSTAYAYANYLVSSVTTRELFRYVQLEIVRFWDQLVWMDAAN 1923

Query: 1674 YGGI----PARADESLDDDSQVDIVSSWNIAEYLPKEIQDHFVLVVSEFMY----IPWKH 1725
              GI    P   ++ LD   QV++   +N+A YLP  +QD F  V+  F++       + 
Sbjct: 1924 SAGIVCPRPDLDEQPLD---QVEVEMQFNVATYLPDAVQDDFTKVIGRFVHGMLVAKRQQ 1980

Query: 1726 AQKLAASRASLQEGSSCTPSITVAAAENFESHIVQYVKGEISSYFTGKLL-SIVRDAIHH 1784
            +  L      LQ G            ++ +          IS   T + L ++ R    +
Sbjct: 1981 SADLRTPLRILQNGLETVERGKAIGDKDGDDDAKSPANTLISETLTRQFLKAVTRLKDAY 2040

Query: 1785 MKKMNNDQHNSPGVMQTAANIHKVDAPLEFIKHVCAAFALDQNVQHDVLVMRKNLLKYVR 1844
              K + +  + P +    +++   +  LEFIK  CA  AL ++V  +V+++++NLL  + 
Sbjct: 2041 ADKEDPEAFDFPEL--PGSHLRPKNPVLEFIKTTCAVLALAKDVSEEVVILKRNLLDLIG 2098

Query: 1845 VREFAPEAEFRDPCPSFILPNVICSYCNDCRDLDLCRDMALLAQD--WHCAMPQCGQPYD 1902
            VREFA EA F +PC  F +P V+C  CN  RDLDLCR++A L +D  W C   +C   YD
Sbjct: 2099 VREFAKEAIFVNPCLPFKVPMVVCRSCNSIRDLDLCRNVAFLVKDQPWLCE--RCSTEYD 2156

Query: 1903 REVMENALLQIVRQRERLYHLQDLVCIRCNQVKAAHLAEQCACAGSFRCKEDASDFRSKM 1962
            R  +E  ++  +++R   Y LQDL C +C  +K+ +L   C C+G ++  E   D   ++
Sbjct: 2157 RAAIEALIIDSLQRRLVSYQLQDLRCGKCKTMKSENLRSHCDCSGEYQMSETRQDLVKRL 2216

Query: 1963 QIFLNIANRQGFQLLQECTSWI 1984
            Q+   +A+    Q+L     W+
Sbjct: 2217 QVTSKVADFHNLQVLATAVEWM 2238



 Score = 65.9 bits (159), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 43/175 (24%), Positives = 83/175 (47%), Gaps = 26/175 (14%)

Query: 1246 DRIVDYKGWLELKKRKWKDNLDRRKKQKLGSLRASHQANGVSESLGDMINHKEAQRRTGV 1305
            D +  Y  W+   K  W++    ++K+ L S ++S    G + +LG M++ +        
Sbjct: 1260 DIMKTYSAWVAYMKPIWRE----KRKELLASQKSSSGFGGRAGTLGSMMHQRS------- 1308

Query: 1306 GSYFRRQETAMTRCHWQIIQLVP-SSQSGVFLAWVVVEGIMVRIPITVPRLFYLNSKD-P 1363
                    T ++   W I+Q+ P S + G F  W+++   +  + + +PR F++N  + P
Sbjct: 1309 --------TFLSSAVWDIVQITPVSDRPGEFKMWLLIADSLQSVRLRIPRQFFVNFVELP 1360

Query: 1364 IVEK-FPG----RRVNKTLPHGRRSFNLIEVMIDEDQFRKESKKLAALLADPEVE 1413
              +  FP       ++++LP G+RS NL+ +   ED F ++      LL  P V+
Sbjct: 1361 TADGVFPEACEVEPISRSLPRGQRSLNLVRLSTSEDDFVRDEPLYGELLNGPNVD 1415


>gi|281203118|gb|EFA77319.1| putative DNA polymerase epsilon subunit A [Polysphondylium pallidum
            PN500]
          Length = 2313

 Score = 1263 bits (3269), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 652/1433 (45%), Positives = 913/1433 (63%), Gaps = 79/1433 (5%)

Query: 4    RRWDR---QDGRRTKKQKLIRSAEEELEAKLGYDLFSEGDK----RLGWLLTFASSSLED 56
            +RWD    +D       ++I +  E++ +   +    + D+    R GWLL    SS +D
Sbjct: 102  KRWDNDDIEDSGDEDNNEVIDNDIEDVSSHTNHTDKDDRDQFQPLRTGWLLNMKPSSSKD 161

Query: 57   EDTRKVYSCIDLYFVSQDGSTFKSKYKFRPYFYAATKEKMEMDVEAYLRRRYESQIADIE 116
            +++    + I+L+F+ +D ++F++   + PYFY   K+    +VE YL+R+YE++IA I+
Sbjct: 162  KESGVDRASIELFFIQEDATSFRAWVIYNPYFYIYVKDNHHTEVETYLKRQYENKIAGID 221

Query: 117  ILEKEDLDLKNHLSGLHKSYLKISFDTVQQLMDVKKDLLHVVERNQAKFDAAEAYESILT 176
            +++KEDLDL+NHLSG+ K YLKI F  VQ L++++ D+L +V+RN+ +    EAYE    
Sbjct: 222  LIDKEDLDLENHLSGIKKKYLKIRFHNVQTLLEIRSDILPLVKRNKLRQSTTEAYEDPFA 281

Query: 177  G--------KREQRPQDFLDCIVDLREYDVPYHIRFAIDNDVRCGQWYDVSISS-TGP-- 225
                     ++    +   + I+D+REYDV Y+ R AID ++R G WY+V   S T P  
Sbjct: 282  AYSVVSRSDRKSAHSKQATEYILDIREYDVTYYQRAAIDLEIRVGLWYEVKRDSPTAPTT 341

Query: 226  ---LLEKRVDLLQRAEVHVCAFDIETTKLPLKFPDADYDIIMMISYMLDGQGYLIINREC 282
               LLE+     +R +  V AFDIETT LP KFPD + D IMMISYMLD QG+LI+NRE 
Sbjct: 342  VRHLLERE----ERPDPKVLAFDIETTHLPQKFPDPEIDSIMMISYMLDRQGFLIVNREI 397

Query: 283  VGEDIEDLEYTPKPEFEGYFKVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFL 342
            V  DI+D EYTPKPE+EG F V N  +E   L  +F+H++E++P I+VTY+GD FDWPF+
Sbjct: 398  VAADIDDFEYTPKPEYEGPFTVFNEPDERATLERFFSHIRELRPHIFVTYHGDGFDWPFV 457

Query: 343  ETRAAHHGFKMSEELGFQCDKNQGECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAK 402
            + R  HHG  +  E+GF+   ++ + R + A H+D F WVKRDSYLP GS  LK V + K
Sbjct: 458  DARTKHHGMDLYREIGFRKTVDE-DYRGQTAVHMDAFCWVKRDSYLPHGSHRLKEVVRKK 516

Query: 403  LGYDPLEVNPEDMVRFAKEKPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDE 462
            L Y+PLE++PE+MVR A+E P+ +A+YSVSDAVATYYLYM+Y+HPFIFSL  IIP++PD+
Sbjct: 517  LRYNPLELDPEEMVRSAREDPERLANYSVSDAVATYYLYMSYIHPFIFSLCNIIPLNPDD 576

Query: 463  VLRKGSGTLCEMLLMVQAYKANVICPNKHQSDPEKFYRNHLLESETYIGGHVECLESGVF 522
            VLRKGSG+LCE LLM QA++ANVI PNKH  +  K Y+ HL+ESETY+GGHVECLESG+F
Sbjct: 577  VLRKGSGSLCEALLMTQAFRANVIFPNKHIDEQRKIYKGHLVESETYVGGHVECLESGIF 636

Query: 523  RSDLPTSFKLDPSAYEQLLNNLDRDLQYAIKVEGKMDLESVSNYDEVKNAIMEKLLRLQE 582
            RSD+PT F LD  A +  ++ +D  +Q A+K  G  D + ++N+ ++K+ I+ +L  L+E
Sbjct: 637  RSDIPTHFSLDAEAIQTHIDAVDNIIQQAMKETGVSD-DDLTNFQQIKDDIVARLTGLRE 695

Query: 583  EPIREECPLIYHLDVAAMYPNIILTNRLQPPSIVTDEVCTACDFNRPGKTCLRKLEWVWR 642
             P ++  PLIYHLDV+AMYPNIILTNRLQP SIVTDE C  CDFN+P   C R L W WR
Sbjct: 696  NPKQQSKPLIYHLDVSAMYPNIILTNRLQPTSIVTDEFCATCDFNKPESNCQRTLNWEWR 755

Query: 643  GEIFMGKRSDYYHLKKQIESEFVDGTNGHLSKSFLDLPKMEQQSRLKDRLKKYCQKAYKR 702
            G+      S+Y  + +Q+ESE      G   K F +  + EQ   L+ RLK+Y +K YK+
Sbjct: 756  GDYSPSNFSEYRLILQQLESERF----GPEEKPFSEHTEEEQNIMLRKRLKEYSKKVYKK 811

Query: 703  VLDKPVTELREAGICMRENSFYVDTVRSFRDRRYEYKGLNKVWKGKLSEAKASGNSIKIQ 762
                   E++   +CMRENSFYVDTV+ FRDRRY YK L+  WKG L  A+   +S  + 
Sbjct: 812  T-HIISNEIKSDTVCMRENSFYVDTVKLFRDRRYVYKDLHGQWKGHLDSAQKGSSSHDLG 870

Query: 763  EAQDMVVLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEK 822
            + Q+MV++Y+S+QLAHKCILNSFYGYVMRKG+RWYSM+MAG+VT+TG+ II+NAR+ +E+
Sbjct: 871  KCQNMVIMYESMQLAHKCILNSFYGYVMRKGSRWYSMQMAGIVTHTGSNIIKNARIAVEQ 930

Query: 823  IGKPLELDTDGIWCVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTL 882
            +G+PLELDTDGIWC+LP SFPE ++ K K+ K K   ++   +LN  VA   TN QYQ L
Sbjct: 931  LGRPLELDTDGIWCILPESFPEEYSLKLKNGKSK-KFNFLNALLNARVAELYTNHQYQEL 989

Query: 883  VDPVSKTYETHSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEI 942
                +  Y T SECSI+FE DGPY  M +P  KE+ + +KKRYAVFN  G + ELKGFEI
Sbjct: 990  --GPNGEYITRSECSIQFESDGPYGCMFIPTGKEKDVKLKKRYAVFNKQGGVQELKGFEI 1047

Query: 943  KRRGELKLIKVFQAELFDKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYI 1002
            KRRGEL+LIK FQ ELF  FL G+T+E CY A+AAVAN WLD+LD+      + ELI  I
Sbjct: 1048 KRRGELELIKTFQTELFQCFLQGNTLETCYHAIAAVANHWLDVLDSHADGYDEKELIRLI 1107

Query: 1003 SESSTMSKSLADYGEQKSCAVTTARRLSDFLGDTMVKDKGLRCQYIVACEPQGTPVSERA 1062
            +ESS MSK L +Y  QKS A+ TA +L +FLG  +VKD GL+CQYI+A +P G PV+ER 
Sbjct: 1108 TESSKMSKKLEEYDRQKSTAIGTAFKLKEFLGPEIVKDAGLQCQYIIANKPAGAPVTERT 1167

Query: 1063 VPVAIFETDAEIMKFYLRKWCKTSSDVGIRSIVDWSYYKQRLSSAIQKIITIPAAMQKVS 1122
            +P  IF  D E+   +LRKW K   DVG+R I+DW YY+QRLS  IQK+IT+PAA+Q V 
Sbjct: 1168 IPTEIFAADEEVRVMFLRKWTK-GKDVGLRDIIDWDYYRQRLSGVIQKMITLPAALQNVE 1226

Query: 1123 NPVPRVVHPDWLYKKVREKEDKFRQRKLVDIFSSLKKDDFLNKTCNAETNLMDENVEDLE 1182
            NPVPRV+HPDW+ K+++ + D  +Q ++   F+ + K                ++++D+E
Sbjct: 1227 NPVPRVLHPDWILKELKRQNDSRQQTQITSFFNKVDK---------------AQHMDDIE 1271

Query: 1183 DFPKKRRNSVNGPRPIVRCFEVNNEQKTVKTTDQVDSLRQQLEPSEVSDQQPSSQNAIDT 1242
            D  K +        P+   F  +        +D   + +++ +  ++  + P  +     
Sbjct: 1272 DMFKDKFQDAASKPPM---FTKHKRTGATTASDLAANKKKRHQEEQLIGECPKYE----- 1323

Query: 1243 ENIDRIVDYKGWLELKKRKWKDNLDRRKKQKLGSLRASHQANGVSESLGDMINHKEAQRR 1302
                  VD+ GWL+ KK  W+    R K +K G            E   D +   ++   
Sbjct: 1324 ------VDFDGWLKHKKVHWRKLRSRIKAKKTG-----------KEVDFDELKTVQSNSA 1366

Query: 1303 TGVGSYFRRQETAMTRCHWQIIQLVPSSQSGVFLAWVVVEGIMVRIPITVPRLFYLNS-- 1360
                 +F  Q  A+ +  W II + P++  G +  W ++   ++ I + + R FYLNS  
Sbjct: 1367 KSFNGFFTSQNEAVRKGVWHIISIDPTNHPGFYTFWSLIGDQLIPIKVELQRHFYLNSFQ 1426

Query: 1361 KDPIVEKFPGRRVNKTLPHGRRSFNLIEVMIDEDQFRKESKKLAALLADPEVE 1413
            +DP     P    N   P  +   +L +  + ED+F K SK+L+ L   P++E
Sbjct: 1427 RDPYDGANPVVS-NAVPPRSKPRLHLTQHSMSEDEFIKNSKELSTLFTLPQIE 1478



 Score =  215 bits (548), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 119/399 (29%), Positives = 206/399 (51%), Gaps = 55/399 (13%)

Query: 1385 NLIEVMIDEDQFRKESK-KLAALLADPEVEVLGWQQNAAKIGMQRCAASSQWFNERISLA 1443
            N++E+  D    R+ +K ++ +   D +     W+ +A K  + R      +      LA
Sbjct: 1630 NIVEMYHDIPLLREFAKVQMISHEYDSQYSPFNWEVHALKPLLTRIGEVDNYIKYFTGLA 1689

Query: 1444 RYA----------------------------HILWISDDGVPDLGGTSEEDECFADEVHQ 1475
            RYA                            H+LW+S    PDLGG+ E+D  F +E+ +
Sbjct: 1690 RYANIPIGNLKGDYASFVSDVCYSRMLKESNHLLWMSLSNCPDLGGSEEDDAKFHEELGK 1749

Query: 1476 PVLTYPGAYRKVSVELKIHHLSVNALLKSNQVNEMEG--GG--------LFGFDQDMNSG 1525
              +  PG Y     EL I  L+VN +L+S+ + ++EG  GG           FD  ++  
Sbjct: 1750 TEINQPGCYNSACFELNIGGLAVNTILESSHLADIEGIIGGQLNNGDSETLNFDNSVDKQ 1809

Query: 1526 PYNNEL----CGFDETTSSAPAFRVVKQLIQRCLTDAVTSG---NVFADAILQHLYRWLC 1578
            P   ++       ++  S    F ++++++ R   D V      N   D +L H YRW+ 
Sbjct: 1810 PNYEKIVKTSAAMEQFNSCDKEFNILRKMVTRWSLDLVMGNRRNNPTPDLLLTHFYRWIS 1869

Query: 1579 SPHSKLHDPVLHRILHKVMQKVFAMLLAEFRKLGATIIFANFSKVIIDTGKFDLSAAKAY 1638
            SP+S ++DP++HR LH +M+KVF  L+ EF+KLG  +I+ NF+++I+ + K  +  AK Y
Sbjct: 1870 SPYSGMYDPIIHRTLHGLMKKVFLQLIFEFKKLGCKVIYGNFNRIILCSQKTSIEDAKQY 1929

Query: 1639 CDSLLKALQTRELFEWIELEPVHFWHSLLFMDQYNYGGI---PARADES------LDDDS 1689
            C  ++  ++ +ELF WI ++P  FW++LL+MD  N+GG+   P   D++         + 
Sbjct: 1930 CSYIITVIKKKELFSWITIKPTKFWNNLLWMDVSNFGGVYQQPPSQDQNNKVSPDTTSNQ 1989

Query: 1690 QVDIVSSWNIAEYLPKEIQDHFVLVVSEFMYIPWKHAQK 1728
              D++S WN++E+LP  IQ+ F+LV+S+F++  + H +K
Sbjct: 1990 TTDLISHWNLSEFLPPSIQNSFLLVISDFIHKLYIHNEK 2028



 Score =  156 bits (395), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 75/186 (40%), Positives = 119/186 (63%), Gaps = 4/186 (2%)

Query: 1802 AANIHKVDAPLEFIKHVCAAFALDQNVQHDVLVMRKNLLKYVRVREFAPEAEFRDPCPSF 1861
             +++H  +  LEF+K VC    LDQ++ + V  +RKNL++ + +REF+ EA F+DPC S+
Sbjct: 2129 GSHLHFTNPALEFVKSVCHVLMLDQSLHNQVQRLRKNLMRIINIREFSEEAVFKDPCLSY 2188

Query: 1862 ILPNVICSYCNDCRDLDLCRDMALLAQDWHCAMPQCGQPYDREVMENALLQIVRQRERLY 1921
            ++ +VICSYC  CRD+DL RD A       CA  QCG  Y++  +E+ L++ V++R   Y
Sbjct: 2189 VMSDVICSYCYSCRDIDLLRDNA-TNNKLVCA--QCGNNYNKGQIESVLVETVQRRSLSY 2245

Query: 1922 HLQDLVCIRCNQVKAAHLAEQC-ACAGSFRCKEDASDFRSKMQIFLNIANRQGFQLLQEC 1980
            HLQDL C +C Q+K  +L++ C  C+G ++C+E +S  + ++ IF NIA    F  LQE 
Sbjct: 2246 HLQDLKCSKCAQIKIDNLSDICHTCSGQYQCREPSSTLQKELIIFGNIAKFYEFVWLQEI 2305

Query: 1981 TSWILE 1986
               +++
Sbjct: 2306 VEGLVK 2311


>gi|444726433|gb|ELW66967.1| DNA polymerase epsilon catalytic subunit A, partial [Tupaia
            chinensis]
          Length = 2293

 Score = 1260 bits (3261), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 623/1163 (53%), Positives = 822/1163 (70%), Gaps = 88/1163 (7%)

Query: 25   EELEAKLGYDLFSEGDKRLGWLLTFASSSLEDEDTRKVYSCIDLYFVSQDGSTFKSKYKF 84
            ++++A+ G++   E  ++ GWL+    + + DED R V S +D YF+  DGS FK    +
Sbjct: 22   DKMDARFGFERLKEPGEKTGWLINMHPTEVLDEDKRLV-SAVDYYFIQDDGSRFKVALPY 80

Query: 85   RPYFYAATKEKMEMDVEAYLRRRYESQIADIEILEKEDLDLKNHLSGLHKSYLKISFDTV 144
            RPYFY AT            R++++ +IA +E + KEDLDL NHL GL ++Y+K+SF TV
Sbjct: 81   RPYFYIAT------------RKKFQGKIAKVETVPKEDLDLPNHLVGLKRNYIKLSFHTV 128

Query: 145  QQLMDVKKDLLHVVERNQAKFDAAEAYESILTG------------KREQRPQDFLDCIVD 192
              L+ V+K++   V++N+ +  A++AY ++L+             +  ++  D LD IVD
Sbjct: 129  DDLVKVRKEISPAVKKNRERAHASDAYTAMLSSVLQGGSIVPDEEEASKKTADQLDNIVD 188

Query: 193  LREYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLLE--KRVDLLQRAEVHVCAFDIETTK 250
            +REYDVPYHIR +ID  +    WY+V +  +   +E  +R DL++R +  V AFDIETTK
Sbjct: 189  MREYDVPYHIRLSIDLKIHVAHWYNVRLRGSAFPVEITRRDDLVERPDPVVLAFDIETTK 248

Query: 251  LPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNVNNE 310
            LPLKFPDA  D IMMISYM+DGQ                                     
Sbjct: 249  LPLKFPDAQTDQIMMISYMIDGQ------------------------------------- 271

Query: 311  IELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDKNQGECRA 370
            + L++ WF H+QE KP I VTYNGD+FDWPF+E RAA HG  M +E+GFQ D +QGE +A
Sbjct: 272  VRLIQRWFEHVQETKPTIMVTYNGDFFDWPFVEARAAVHGLSMHQEIGFQQD-SQGEYKA 330

Query: 371  KFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQMMASYS 430
                H+DC  WVKRDSYLP GS  LKA  KAKLGYDP+E++PEDM R A E+PQ      
Sbjct: 331  PQCIHMDCLRWVKRDSYLPVGSHNLKAAAKAKLGYDPVELDPEDMCRMATEQPQ------ 384

Query: 431  VSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVICPNK 490
               A+ATYYLYM YVHPFIF+L TIIPM PDEVLRKGSGTLCE LLMVQA+ AN+I PNK
Sbjct: 385  ---ALATYYLYMKYVHPFIFALCTIIPMEPDEVLRKGSGTLCEALLMVQAFHANIIFPNK 441

Query: 491  HQSDPEKFYRN-HLLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQLLNNLDRDLQ 549
             + +  K   + H+L++ETY+GGHVE LESGVFRSD+P  F+++P+A++ LL  +++ ++
Sbjct: 442  QEQEFNKLTDDGHVLDAETYVGGHVEALESGVFRSDIPCRFRMNPAAFDFLLQRVEKTMR 501

Query: 550  YAIKVEGKMDLESVSNYDEVKNAIMEKLLRLQEEPIREECPLIYHLDVAAMYPNIILTNR 609
            +AI+ E K+ +E V+N+ EV + I  KL  L++ P R ECPLIYHLDV AMYPNIILTNR
Sbjct: 502  HAIEEEEKVPMEQVTNFHEVCDQIKTKLTCLKDVPNRIECPLIYHLDVGAMYPNIILTNR 561

Query: 610  LQPPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYYHLKKQIESE-----F 664
            LQP ++V +  C ACDFN+PG  C R++ W WRGE     RS+Y+ ++ Q+ESE     F
Sbjct: 562  LQPSAMVNEATCAACDFNKPGANCQRRMAWQWRGEFMPASRSEYHRIQHQLESEKFPALF 621

Query: 665  VDGTNGHLSKSFLDLPKMEQQSRLKDRLKKYCQKAYKRVLDKPVTELREAGICMRENSFY 724
             +G     +++F +L + EQ    K RL  YC+KAY++     V E R   +C RENSFY
Sbjct: 622  PEGP----ARAFHELSREEQAKYEKRRLADYCRKAYRKTHVTKVEE-RLTTVCQRENSFY 676

Query: 725  VDTVRSFRDRRYEYKGLNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHKCILNS 784
            VDTVR+FRDRRYE+KGL+KVWK KL+ A  +G++  ++  ++M VLYDSLQLAHKCILNS
Sbjct: 677  VDTVRAFRDRRYEFKGLHKVWKKKLAAAVEAGDASGVKRCRNMEVLYDSLQLAHKCILNS 736

Query: 785  FYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLPGSFPE 844
            FYGYVMRKGARWYSMEMAG+V +TGA II  AR LIE+IG+PLELDTDGIWCVLP SFPE
Sbjct: 737  FYGYVMRKGARWYSMEMAGIVCFTGANIITQARELIEQIGRPLELDTDGIWCVLPNSFPE 796

Query: 845  NFTFKTKDLKK-KLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEFEVD 903
            NF  +T  +KK K+TISYP  MLN+ V    TNDQYQ L +P S TY T SE SI FEVD
Sbjct: 797  NFVIQTTSVKKPKITISYPGAMLNIMVKEGFTNDQYQELTEPSSLTYVTRSENSIFFEVD 856

Query: 904  GPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFL 963
            GPY AMILPASKEEG  +KKRYAVFN+DG+LAELKGFE+KRRGEL+LIK+FQ+ +F+ FL
Sbjct: 857  GPYLAMILPASKEEGKKLKKRYAVFNEDGSLAELKGFEVKRRGELQLIKIFQSSVFEAFL 916

Query: 964  HGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLADYGEQKSCAV 1023
             GST+EE Y +VA VA+ WLD+L ++  ++ DSEL + ISE+ +MS+ L DYGEQKS ++
Sbjct: 917  KGSTLEEVYGSVAKVADYWLDVLYSKAANMPDSELFELISENRSMSRKLEDYGEQKSTSI 976

Query: 1024 TTARRLSDFLGDTMVKDKGLRCQYIVACEPQGTPVSERAVPVAIFETDAEIMKFYLRKWC 1083
            +TA+RL++FLGD MVKD GL C+YI++ +P+G+PV+ERA+P+AIF+ +  + + +LRKW 
Sbjct: 977  STAKRLAEFLGDQMVKDAGLSCRYIISRKPEGSPVTERAIPLAIFQAEPTVRRHFLRKWL 1036

Query: 1084 KTSS--DVGIRSIVDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLYKKVREK 1141
            K+SS  D  IR+I+DW YY +RL SAIQKIITIPAA+Q+V NPVPRV HPDWL+KK+ EK
Sbjct: 1037 KSSSLQDFDIRTILDWDYYLERLGSAIQKIITIPAALQQVKNPVPRVKHPDWLHKKLLEK 1096

Query: 1142 EDKFRQRKLVDIFSSLKKDDFLN 1164
             D ++Q+K+ ++F  + K   L+
Sbjct: 1097 NDVYKQKKISELFVPVGKRQILD 1119



 Score =  302 bits (773), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 195/638 (30%), Positives = 315/638 (49%), Gaps = 111/638 (17%)

Query: 1442 LARYAHILWISDDGVPDLGGTSEEDECFA---DEVHQPVLTYPGAYRKVSVELKIHHLSV 1498
            L R+ H+LW+S    PDLGG   +D       D+     +  PG Y  V VEL + +L+V
Sbjct: 1667 LQRHNHLLWLSPTARPDLGGKEADDNRLVMEWDDQATVEINSPGCYSTVCVELDVQNLAV 1726

Query: 1499 NALLKSNQVNEMEGGGLFG--FD-------QDMNSG-PYNNELCGFDETTSSAPAFRVVK 1548
            N +L+S+ VN+MEG    G  FD       +DM +G    +    +DET   +  FR++K
Sbjct: 1727 NTILQSHHVNDMEGSDSVGISFDVIQQASLEDMITGNQAASAPASYDETALCSSTFRILK 1786

Query: 1549 QLIQRCLTDAVTSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEF 1608
             ++   + + +   NV+AD  + H YRWL SP S LHDP LHR L+ +M+K+F  L+AEF
Sbjct: 1787 SMVVGWVREIMQYHNVYADNQVVHFYRWLRSPSSLLHDPALHRTLYSMMKKLFLQLIAEF 1846

Query: 1609 RKLGATIIFANFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLF 1668
            ++LG+++++ANF+++I+ T K  +  A AY + +  ++ ++E+F  + L     W  LL+
Sbjct: 1847 KRLGSSVVYANFNRIILCTKKRQIDDAIAYVEYITNSIYSKEIFHSLTLSFSRCWEFLLW 1906

Query: 1669 MDQYNYGGIPAR------------------ADESLDDDSQVD--------------IVSS 1696
            MD  NYGGI  +                   D+  D+DS+                + ++
Sbjct: 1907 MDPSNYGGIKGKVPPTIHCGQQDSQTGERAGDDQEDEDSREQEDGGGAEESSVEDLLENN 1966

Query: 1697 WNIAEYLPK--EIQDHFVLVVSEFMYIPWKH--------------AQKLAASRASLQEGS 1740
            WNI ++LP+    Q +F+++VS ++   +                 ++  AS+ S + G 
Sbjct: 1967 WNILQFLPQAASCQSYFLMIVSAYIVAVYHSMKDELRRSAPGSTPVRRRGASQFSQEAGG 2026

Query: 1741 SCTPSITVAAAENFESHIVQYVKGEIS-SYFTGKLLSIVRDAIHHMKKMNNDQHNSPGVM 1799
             C       A     +    YV  E++ S+FT             ++K      NS  + 
Sbjct: 2027 VC------GALPGVITFSQDYVANELTQSFFT---------ITQKIQKKVTGSRNSTELS 2071

Query: 1800 QT-----AANIHKVDAPLEFIKHVCAAFALDQNVQHDVLVMRKNLLKYVRVREFAPEAEF 1854
            +       +++   +  LEFIK+VC   +LD N+ + V  + ++LL+ V V EF+ EA+F
Sbjct: 2072 EMFPLLPGSHLVLNNPALEFIKYVCKVLSLDTNITNQVNKLNRDLLRLVDVAEFSEEAQF 2131

Query: 1855 RDPCPSFILPNVICSYCNDCRDLDLCR-----DMALLAQDWHCAMPQCGQPYDREVMENA 1909
            RDPC S++LP V+C  C+ CRDLDLCR     D A+L Q W C+   C   YD   +E A
Sbjct: 2132 RDPCRSYVLPEVVCRSCSSCRDLDLCRGSSSQDGAVLPQ-WLCS--NCQVAYDSAAIEMA 2188

Query: 1910 LLQIVRQRERLYHLQD---------------------LVCIRCNQVKAAHLAEQCACAGS 1948
            L++ ++++   + LQD                     L+C++C  VK  ++   C+CAG 
Sbjct: 2189 LVEALQKKLMAFTLQDLSSSTSPADCRGPSAGFLDSLLICLKCRGVKETNMPVYCSCAGD 2248

Query: 1949 FRCKEDASDFRSKMQIFLNIANRQGFQLLQECTSWILE 1986
            F        F  ++ IF NIA   G   L E   W+L+
Sbjct: 2249 FDLTVHTQVFMEQVGIFRNIAQHYGMAYLMETLDWLLQ 2286


>gi|313226700|emb|CBY21845.1| unnamed protein product [Oikopleura dioica]
          Length = 2091

 Score = 1257 bits (3252), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 661/1411 (46%), Positives = 910/1411 (64%), Gaps = 98/1411 (6%)

Query: 22   SAEEELEAKLGYDLFSEGDKRLGWLLTFASSSLEDEDTRKVYSCIDLYFVSQDGSTFKSK 81
            + E EL+   GY    E     GWL+   +    +E+   V SC+  YF+ QDG  FK +
Sbjct: 33   TQENELDELYGYQEPEEPGVSTGWLVNMHAGDTINEEGHLV-SCVHYYFIKQDGERFKVR 91

Query: 82   YKFRPYFYAATKEKMEMDVEAYLRRRYESQI-ADIEILEKEDLDLKNHLSGLHKSYLKIS 140
              ++PYFY   +  +E ++  Y+ RR+E  +   +E++ KEDLDL NHLSGL ++++K++
Sbjct: 92   LTYQPYFYIEPRLGLEHEIANYVSRRFEKMVNVKVELVAKEDLDLNNHLSGLKRNFVKLT 151

Query: 141  FDTVQQLMDVKKDLLHVVERNQAKFDAAEAYESI--LTGKREQRPQDFLDCIVDLREYDV 198
            FD V  +  V K L   V RN+ K    +A + +  L G ++    D +D IVD+REYDV
Sbjct: 152  FDHVDDMQIVLKPLRMAVARNK-KLAENKASDLVMALDGDQDAVSSDMMDEIVDMREYDV 210

Query: 199  PYHIRFAIDNDVRCGQWYDVSISSTG--PLLEKRVDLLQRAEVHVCAFDIETTKLPLKFP 256
            P+H+R +ID  +    WYDV+ +     P  ++R DLL R +  V A+DIETTKLPLKFP
Sbjct: 211  PFHVRVSIDKQIFVAHWYDVNWTGQHEIPTFKRRDDLLTRPDPVVLAYDIETTKLPLKFP 270

Query: 257  DADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNVNNEIELLRL 316
            +++ D IMMISYM+DGQGYLI NR  +  D+ED E+TP+PEFEG F V N  +E   +R 
Sbjct: 271  NSEIDHIMMISYMVDGQGYLINNRAILSADVEDFEFTPRPEFEGPFIVYNEEDEFATIRK 330

Query: 317  WFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDKNQGE----CRAKF 372
            +F H+QE+KP + VTYNGD+FDWPF++ RA  HG  M  E+GF+ + + G+    CR   
Sbjct: 331  FFDHIQELKPHVIVTYNGDFFDWPFVDDRAKIHGLSMKREIGFERETHGGDDTFLCRQ-- 388

Query: 373  ACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQMMASYSVS 432
              H+D + WVKRDSYLP GSQGLKA  KAKL +DP+E++PE M + A E+PQ++A+YSVS
Sbjct: 389  CLHMDAYKWVKRDSYLPVGSQGLKAAAKAKLRFDPVELDPELMCKMACEQPQVLATYSVS 448

Query: 433  DAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVICPNKHQ 492
            DA+ATYYLY  YVHPFIF+L  IIPM PDEVLRKGSGTLCE LLM  AYKANVI PNK Q
Sbjct: 449  DALATYYLYQKYVHPFIFALCMIIPMEPDEVLRKGSGTLCEALLMDYAYKANVIYPNKQQ 508

Query: 493  SDPEKFYRNHLLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQLLNNLDRDLQYAI 552
            ++ +K +  HLLESETY+GG VE +E GVFR+D P  F+LDP AY+ LL+ +D  +++++
Sbjct: 509  TNMDKTFEGHLLESETYVGGRVEAIECGVFRADFPEKFRLDPDAYQALLDAVDETMKFSL 568

Query: 553  KVEGKMDLESVSNYDEVKNAIMEKLLRLQEEPIREECPLIYHLDVAAMYPNIILTNRLQP 612
            + E  + ++ V +YDEV + I EKL  L++ P R E PLIYHLDV AMYPNIILTNRLQP
Sbjct: 569  EKEEGVPIDQVEDYDEVCSQIKEKLESLRDTPNRIENPLIYHLDVGAMYPNIILTNRLQP 628

Query: 613  PSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYYHLKKQIESEFVDGTNGHL 672
            P+I+ +  C  CD+N P   C R+++W+WRGEI        +  + Q  S     TN   
Sbjct: 629  PAIINENTCVTCDWNTPDADCRRRMDWMWRGEILPS-----FEKRNQSHS----ATN--- 676

Query: 673  SKSFLDLPKMEQQSRLKDRLKKYCQKAYKRVLDKPVTELREAGICMRENSFYVDTVRSFR 732
            +  F  LPK +Q ++++ RL +Y ++AYK+V      ELR   IC REN+FY++TVR FR
Sbjct: 677  NVPFFKLPKRDQDAKVRQRLAEYSRRAYKKV-KTTKEELRNDIICQRENAFYINTVRMFR 735

Query: 733  DRRYEYKGLNKVWKGKLSEAKASG-NSIKIQEAQDMVVLYDSLQLAHKCILNSFYGYVMR 791
            D+RYEYKGL K  K  L  A+ +G ++ +I++    VVLYDSLQLAHKCILNSFYGYVMR
Sbjct: 736  DKRYEYKGLLKKSKKLLEGAQQNGADATEIKDMNGKVVLYDSLQLAHKCILNSFYGYVMR 795

Query: 792  KGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLPGSFPENFTFKT- 850
            KG+RW+SMEMAG+V YTGA II+NAR+++EKIG+ LELDTDGIWC+LP +FPENFTFKT 
Sbjct: 796  KGSRWFSMEMAGIVCYTGANIIKNARMIVEKIGRGLELDTDGIWCILPATFPENFTFKTR 855

Query: 851  KDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEFEVDGPYKAMI 910
            K+ KKK+TISYP  +LN    +  TN+QY  L D  +  Y    E SI FEVDGPYKAMI
Sbjct: 856  KEGKKKVTISYPGSILNYMCDQKFTNEQYHDL-DQQTGKYTKRDENSIFFEVDGPYKAMI 914

Query: 911  LPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFLHGSTIEE 970
            LPAS E+G  +KKRYAVFN DG+LAELKGFE+KRRGEL+L+K+FQ  +FD FL G T++E
Sbjct: 915  LPASTEQGRKLKKRYAVFNFDGSLAELKGFEVKRRGELQLVKLFQMSVFDSFLKGKTLKE 974

Query: 971  CYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLADYGEQKSCAVTTARRLS 1030
            CY+ VA VA+ W+D+L ++   + D EL D I+E   MSK L++YGEQKS ++TTA+RL+
Sbjct: 975  CYAEVAKVADYWIDVLYSKAAHMPDEELFDLIAEKRNMSKKLSEYGEQKSTSITTAKRLA 1034

Query: 1031 DFLGDTMVKDKGLRCQYIVACEPQGTPVSERAVPVAIFETDAEIMKFYLRKWCKTSS--D 1088
            +FLGD MVKD GL C + V+  P G P +ER +P+AIF+ +  I  +Y+RKWCK S+  D
Sbjct: 1035 EFLGDEMVKDSGLACNFFVSKYPAGAPTTERTIPLAIFQAENSIKNYYVRKWCKDSTLHD 1094

Query: 1089 VGIRSIVDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLYKKVREKEDKFRQR 1148
              IR ++DW+YY +R  + IQKIITIPAA+Q +SNPVPR+ HPDWL+K++ ++ D FRQ 
Sbjct: 1095 TDIRDLIDWAYYLERFGATIQKIITIPAALQNISNPVPRIKHPDWLHKELLQRNDPFRQG 1154

Query: 1149 KLVDIFSSLKKDDFLNKTCNAETNLMDENVEDLEDF----PKKRRNSVNGPRPIVRCFEV 1204
            K++D F   K      +T   E N  +    D+E+     P+ R+  VN  R        
Sbjct: 1155 KMMDHFKVTK------RTTTEEINEKENKAPDIENLCGEKPQPRKPLVNFSR-------- 1200

Query: 1205 NNEQKTVKTTDQVDSLRQQLEPSEVSDQQPSSQNAIDTENIDRIVDYKGWLELKKRKWKD 1264
                                            + A + E++    +++ W + +K KW+ 
Sbjct: 1201 --------------------------------KRAREDESLFIGQNWRKWFKFQKLKWE- 1227

Query: 1265 NLDRRKKQKLGSLRASHQANGVSESLGDMINHKEAQRRTGVGSYFRRQETAMTRCHWQII 1324
               R+K++ L       ++    ES+G  +           G+  +R +T + +  W II
Sbjct: 1228 -FQRKKRRILKKSGKVDRSGRQGESVGGTL-----------GAIKKRAKTVLDQ-FWSII 1274

Query: 1325 QLVPSSQSGVFLAWVVVEGIMVRIPITVPRLFYLNSKDPIVEKFPG--RRVNKTLPHGRR 1382
            Q V   Q+G F  W  +   +  + ++VPR+FY+N K P  ++     +RV K+LP    
Sbjct: 1275 Q-VDELQNGEFKLWTQIGNELHHMTVSVPRIFYVNRKTPKAKELGPVWKRVQKSLPRSTP 1333

Query: 1383 SFNLIEVMIDEDQFRKESKKLAALLADPEVE 1413
            +  L +  I+E  F+    ++   L  P+VE
Sbjct: 1334 ADYLYQYSINESDFKNHYHEIQTELNGPDVE 1364



 Score =  190 bits (483), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 142/552 (25%), Positives = 251/552 (45%), Gaps = 55/552 (9%)

Query: 1441 SLARYAHILWISDDGVPDLGGTSEEDECFADEVHQ--PVLTYPGAYRKVSVELKIHHLSV 1498
            +L R   +LW S    PDLGG   +      E  +  P+   PG  + ++VE+ I+ +  
Sbjct: 1569 ALQRSNQLLWCSKSARPDLGGRERDLARLEAEPSELVPLFDKPGLSQSITVEMTINGMFE 1628

Query: 1499 NALLKSNQVNEMEGGGLF---GFDQDMNS-GPYNNELCGFDETTSSAPAFRVVKQLIQRC 1554
             ALL+S+ + E++G   F     D+   + G  N     + E+T + P +R++K L+   
Sbjct: 1629 AALLQSHNLTELDGFETFQQGTVDKQFKAEGQLNT---NYAESTLALPQYRILKNLVAVW 1685

Query: 1555 LTDAVTSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEFRKLGAT 1614
            + D     + FADA +QHL R++ S  S L DP +  +L   + +++ +L  E +++G  
Sbjct: 1686 VKDIAQYDSSFADAQVQHLMRYITSTASLLFDPAIQELLVSAVYRLYKLLCNELKRIGCE 1745

Query: 1615 IIFANFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLFMDQYNY 1674
             I  +  K+I+ T K +++ A  Y D + K L+ +ELF+ I+ +    W +LL+ +Q NY
Sbjct: 1746 AIHVSPRKLILVTKKKNIAEAIGYVDFIEKTLRKKELFQAIDFKFTAAWETLLWHNQNNY 1805

Query: 1675 GGIPARADESLDDDSQVDIVSSWNIAEYLPKEIQDHFVLVVSEFMYIPW-KHAQKLAASR 1733
            GGI       + +    DI+   +    + +   +   +V    M   W +H    A  R
Sbjct: 1806 GGI------QVQNSIIRDIMGQEDEDSDVEEAEDEEDEMV----MKFEWAEHLPTEAGMR 1855

Query: 1734 ASLQEGSSCTPSITVAAAENFESHIVQYVKGEISSYFTGKLLSIVRDAIHHMKKMNNDQH 1793
            AS  +      S+      +   H       EI     G  L++   A+ + K       
Sbjct: 1856 ASFTQVVQAQESLLKPILVDCWIHQGTKRAKEIFPKLAGSYLTLDHPALFYAKT------ 1909

Query: 1794 NSPGVMQTAANIHKVDAPLEFIKHVCAAFALDQNVQHDVLVMRKNLLKYVRVREFAPEAE 1853
                                 I  V +A A    V  ++  +R+N+ + + V EF+ + +
Sbjct: 1910 ---------------------ITQVLSAHA---TVSEELQSLRRNVFRLLGVSEFSEKGQ 1945

Query: 1854 FRDPCPSFILPNVICSYCNDCRDLDLCRDMALLAQDWHCAMPQCGQPYDREVMENALLQI 1913
            + DP    IL +V+C+ C   +DLDL  D   L  D  C      +   + ++E  L++ 
Sbjct: 1946 WVDPAAKLILKDVVCTQCGVSQDLDLSVD---LNPDCECEF--FDEKTHKRIIEARLIEE 2000

Query: 1914 VRQRERLYHLQDLVCIRCNQVKAAHLAEQCACAGSFRCKEDASDFRSKMQIFLNIANRQG 1973
            ++++   ++LQD+VC+RCNQV+   +   C CAG F+C E+  D ++  +    +A    
Sbjct: 2001 LKKKVIGWNLQDVVCMRCNQVRHGDMGHLCECAGRFKCIENGKDLQTYFRTIRQLAAFYK 2060

Query: 1974 FQLLQECTSWIL 1985
               L     WIL
Sbjct: 2061 MNHLSSTMDWIL 2072


>gi|60098799|emb|CAH65230.1| hypothetical protein RCJMB04_10a23 [Gallus gallus]
          Length = 1128

 Score = 1254 bits (3245), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 609/1092 (55%), Positives = 803/1092 (73%), Gaps = 30/1092 (2%)

Query: 8    RQDGRRTKKQKLIRSAE--EELEAKLGYDLFSEGDKRLGWLLTFASSSLEDEDTRKVYSC 65
            R DG      K +  ++  ++L+A  G++  +E  +R GWL+    + + DED R V S 
Sbjct: 17   RDDGPALSALKRLERSQRTDQLDALFGFERPAEPCERTGWLINMHPTEVLDEDRRAV-SA 75

Query: 66   IDLYFVSQDGSTFKSKYKFRPYFYAATKEKMEMDVEAYLRRRYESQIADIEILEKEDLDL 125
            +D YF+ +DGS FK    +RPYFY AT++  E +V ++L ++++ +IA +E + KEDLDL
Sbjct: 76   VDYYFIQEDGSRFKVALPYRPYFYVATQQGCEREVSSFLAKKFQGKIAKLETVPKEDLDL 135

Query: 126  KNHLSGLHKSYLKISFDTVQQLMDVKKDLLHVVERNQAKFDAAEAYESILTGK------- 178
             NHL GL + YLK+SF TV +L+ V+K++   V +N+ +  A + Y S+L+         
Sbjct: 136  PNHLVGLKRHYLKLSFSTVDELVKVRKEISPAVRKNRERDQANDVYTSMLSSALAGGSLT 195

Query: 179  -----REQRPQDFLDCIVDLREYDVPYHIRFAIDNDVRCGQWYDVSI--SSTGPLLEKRV 231
                   ++  + +D IVD+REYDVPYH+R +ID  +    WY+V    S+  P + +R 
Sbjct: 196  TSEEGASKKVTNQMDNIVDMREYDVPYHMRLSIDLKIHVAHWYNVRYRGSTFPPEITRRD 255

Query: 232  DLLQRAEVHVCAFDIETTKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLE 291
            DL++R +  V AFDIETTKLPLKFPD + D IMMISYM+DGQGYLI NRE V EDIED E
Sbjct: 256  DLVERPDPVVLAFDIETTKLPLKFPDPETDQIMMISYMIDGQGYLITNREIVSEDIEDFE 315

Query: 292  YTPKPEFEGYFKVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGF 351
            +TPKPE+EG F V N  +E  L++ WF H+QE KP I VTYNGD+FDWPF+E RAA HG 
Sbjct: 316  FTPKPEYEGPFCVFNEPDEAHLIQRWFEHVQETKPTIIVTYNGDFFDWPFVEARAAAHGI 375

Query: 352  KMSEELGFQCDKNQGECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVN 411
             M +E+GFQ D +QGE +A    H+DC  WVKRDSYLP GS  LKA  KAKLGYDP+E++
Sbjct: 376  NMYQEIGFQKD-SQGEYKASQCIHMDCLRWVKRDSYLPVGSHNLKAAAKAKLGYDPVELD 434

Query: 412  PEDMVRFAKEKPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTL 471
            PE+M R A E+PQ +A+YSVSDAVATYY+YM YVHPFIF+L TIIPM PDEVLRKG+GTL
Sbjct: 435  PEEMCRMATEEPQTLATYSVSDAVATYYMYMKYVHPFIFALCTIIPMEPDEVLRKGAGTL 494

Query: 472  CEMLLMVQAYKANVICPNKHQSDPEKFYRN-HLLESETYIGGHVECLESGVFRSDLPTSF 530
            CE LLMVQAY AN+I PNK + +  K   + H+L+SETY+GGHVE LESGVFRSD+P  F
Sbjct: 495  CEALLMVQAYHANIIFPNKQEQEFNKLTEDGHVLDSETYVGGHVEALESGVFRSDIPCRF 554

Query: 531  KLDPSAYEQLLNNLDRDLQYAIKVEGKMDLESVSNYDEVKNAIMEKLLRLQEEPIREECP 590
            K++P+A++ L+ N+++ L++AI+ E ++ L+ V+++ EV + I  KL  L++ P R ECP
Sbjct: 555  KMNPAAFDYLVQNVEKTLRHAIEEEERLPLDQVTSFQEVCDEIKVKLNSLKDVPNRIECP 614

Query: 591  LIYHLDVAAMYPNIILTNRLQPPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEIFMGKR 650
            LIYHLDV AMYPNIILTNRLQP ++V +  C ACDFN+PG  C R++ W WRGE     R
Sbjct: 615  LIYHLDVGAMYPNIILTNRLQPSAMVDEATCAACDFNKPGANCQRRMTWQWRGEFMPASR 674

Query: 651  SDYYHLKKQIESE-----FVDGTNGHLSKSFLDLPKMEQQSRLKDRLKKYCQKAYKRVLD 705
            S+Y+ +++Q+ESE     + DG      ++F +L + EQ    K RL  YC+KAYK++  
Sbjct: 675  SEYHRIQQQLESEKFPPLYPDGA----PRAFHELSREEQAKYEKKRLADYCRKAYKKIHV 730

Query: 706  KPVTELREAGICMRENSFYVDTVRSFRDRRYEYKGLNKVWKGKLSEAKASGNSIKIQEAQ 765
              V E R   IC RENSFYVDTVR+FRDRRYE+KGL+KVWK KLS A  +G++ +++  +
Sbjct: 731  TKVEE-RVTTICQRENSFYVDTVRAFRDRRYEFKGLHKVWKKKLSAAMETGDASEVKRCK 789

Query: 766  DMVVLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGK 825
            +M +LYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAG+V +TGA II  AR LIE+IG+
Sbjct: 790  NMEILYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGIVCFTGANIITQARELIEQIGR 849

Query: 826  PLELDTDGIWCVLPGSFPENFTFKTKDLKK-KLTISYPCVMLNVDVARNNTNDQYQTLVD 884
            PLELDTDGIWCVLP SFPENF  K+ + KK K+TISYP  MLN+ V    TNDQYQ L D
Sbjct: 850  PLELDTDGIWCVLPNSFPENFVIKSTNAKKPKVTISYPGAMLNILVKEGFTNDQYQELQD 909

Query: 885  PVSKTYETHSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKR 944
            P S TY T SE SI FEVDGPY AMILPASKEEG  +KKRYAVFN+DG+LAELKGFE+KR
Sbjct: 910  PASLTYVTRSENSIFFEVDGPYLAMILPASKEEGKKLKKRYAVFNEDGSLAELKGFEVKR 969

Query: 945  RGELKLIKVFQAELFDKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISE 1004
            RGEL+L+K+FQ+ +F+ FL G+T+EE Y++VA VA+ WLD+L ++  ++ DSEL + ISE
Sbjct: 970  RGELQLVKIFQSSVFEAFLKGTTLEEVYASVAKVADYWLDVLYSKAANMPDSELFELISE 1029

Query: 1005 SSTMSKSLADYGEQKSCAVTTARRLSDFLGDTMVKDKGLRCQYIVACEPQGTPVSERAVP 1064
            + +MS+ L DYGEQKS +++TA+RL++FLGD MVKD GL C++I++ +P+G+PV+ERA+P
Sbjct: 1030 NRSMSRKLEDYGEQKSTSISTAKRLAEFLGDQMVKDAGLSCRFIISKKPEGSPVTERAIP 1089

Query: 1065 VAIFETDAEIMK 1076
            +AIF+ +  + K
Sbjct: 1090 LAIFQAEPSVRK 1101


>gi|363747908|ref|XP_003644172.1| hypothetical protein Ecym_1099 [Eremothecium cymbalariae DBVPG#7215]
 gi|356887804|gb|AET37355.1| hypothetical protein Ecym_1099 [Eremothecium cymbalariae DBVPG#7215]
          Length = 2184

 Score = 1251 bits (3238), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 668/1435 (46%), Positives = 923/1435 (64%), Gaps = 114/1435 (7%)

Query: 17   QKLIRSAE-EELEAKLGYDLF----------SEGDKRLGWLLTFASSSLEDE----DTRK 61
            Q+L++S + +EL++ +G+D +          ++GD R+GWL     + + D+        
Sbjct: 30   QQLLQSNKVDELDSIMGFDRYIPPQHGSGSGADGD-RVGWLCNMHPTMVTDDVNGGGLNV 88

Query: 62   VYSCIDLYFVSQDGSTFKSKYKFRPYFYAATKEKMEM-DVEAYLRRRYESQIADIEILEK 120
              + +D YF+ ++G  FKS   +  YF  + +++  + DVE +L++  E+ +  +EI++K
Sbjct: 89   GVAGVDFYFLDEEGGYFKSTITYDSYFLVSCRDENRIHDVEEFLKKYLETCLKSVEIIQK 148

Query: 121  EDLDLKNHLSGLHKSYLKISFDTVQQLMDVKKDLLHVVERNQAKFDAAEAYESILTGKRE 180
            +DL + NHL GL K+ LK++F     L + +K L  ++  N       + Y S    +  
Sbjct: 149  DDLSMDNHLLGLRKTLLKLNFANNNNLFEARKLLRPIIRENTGNKLQRDIYHS----EDN 204

Query: 181  QRPQDFLDCIVDLREYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLLEKRVDLLQRAEVH 240
               +D    I D+REYDVP+H+R +ID ++R G+WY ++        EK    +  A+  
Sbjct: 205  IASRDAKLLIEDIREYDVPFHVRVSIDKNIRVGKWYKITSQGFIEYTEK----VAFADPV 260

Query: 241  VCAFDIETTKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEG 300
            V AFDIETTK PLKFPD+  D IMMISYM+DG+G+LI NRE + EDIED EYTP+PE+ G
Sbjct: 261  VLAFDIETTKAPLKFPDSSIDQIMMISYMIDGEGFLITNREIISEDIEDFEYTPRPEYPG 320

Query: 301  YFKVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQ 360
             F V N  +E+ LL+ +F H+++V+P +  T+NGD+FDWPF++TR+  HG  M +E+GF 
Sbjct: 321  QFTVFNEADELALLQRFFEHIRDVRPTVISTFNGDFFDWPFVDTRSKIHGLNMFDEIGFA 380

Query: 361  CDKNQGECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAK 420
             D ++GE ++ +  H+DC+ WVKRDSYLPQGSQGLKAVT+ KLGY+P+E++PE M  +A 
Sbjct: 381  VD-SEGEYKSSYCTHMDCYRWVKRDSYLPQGSQGLKAVTQVKLGYNPIELDPELMTPYAY 439

Query: 421  EKPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQA 480
            E+PQ ++ YSVSDAVATYYLYM YVHPFIFSL TIIP++PDEVLRKG+GTLCEMLLMVQA
Sbjct: 440  ERPQHLSEYSVSDAVATYYLYMKYVHPFIFSLCTIIPLNPDEVLRKGTGTLCEMLLMVQA 499

Query: 481  YKANVICPNKHQSDPEKFYRNHLLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQL 540
            Y+  ++ PNKH    E+FY  HLLESETY+GGHVE LE+GVFRSD+  +F +DP+  ++L
Sbjct: 500  YEKGILLPNKHTDPIERFYDGHLLESETYVGGHVESLEAGVFRSDITNNFSIDPTVIDEL 559

Query: 541  LNNLDRDLQYAIKVEGKMDLESVSNYDEVKNAIMEKLLRLQEEPIREECPLIYHLDVAAM 600
            L+ L   L++ I+ E K +++ V+N+DE+K  I +KLL  +    R E PLIYH+DVA+M
Sbjct: 560  LDELPNALRFCIEAENKTNIDEVTNFDEIKQEITDKLLDFKVNNRRTELPLIYHVDVASM 619

Query: 601  YPNIILTNRLQPPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYYHLKKQI 660
            YPNI+ TNRLQP S+ T+  C +CDFNRPGKTC R+L+W WRGE    K  +Y  +K+ +
Sbjct: 620  YPNIMTTNRLQPDSMKTERDCASCDFNRPGKTCDRRLKWSWRGEFLPAKMDEYGMVKRAL 679

Query: 661  ESEFVDGTNGHLSKSFL---DLPKMEQQSRLKDRLKKYCQKAYKRVLDKPVTEL--REAG 715
            ++E     + +  K FL   +L   EQ S ++ RL  Y +K Y +V    VTE   REA 
Sbjct: 680  QNELFPNKHKNSGKKFLAFDELSYSEQVSHIRKRLADYSKKVYHKV---KVTETIEREAI 736

Query: 716  ICMRENSFYVDTVRSFRDRRYEYKGLNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQ 775
            +C REN FYV+TVRSFRDRRYE+KGL K WK  LS    S +  +  EA+ M+VLYDSLQ
Sbjct: 737  VCQRENPFYVNTVRSFRDRRYEFKGLAKKWKSNLS-GIDSNDKCERDEAKKMIVLYDSLQ 795

Query: 776  LAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIW 835
            LAHK ILNSFYGYVMRKG+RWYSMEMAG+   TGA IIQ AR ++E+IG+PLELDTDGIW
Sbjct: 796  LAHKVILNSFYGYVMRKGSRWYSMEMAGITCLTGATIIQMARSVVERIGRPLELDTDGIW 855

Query: 836  CVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSE 895
            C++P SFPENF F  K+  +KL +SYPC MLN  V    TN QYQ LVD V   Y T+S+
Sbjct: 856  CIIPNSFPENFEFTLKN-GRKLFLSYPCSMLNYKVHEKFTNHQYQELVDDVKHRYRTYSD 914

Query: 896  CSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQ 955
             SI FEVDGPY+AMILP SKEEG  IKKRYAVFN DGTLAELKGFE+KRRGEL+LIK FQ
Sbjct: 915  NSIFFEVDGPYRAMILPTSKEEGKGIKKRYAVFNPDGTLAELKGFELKRRGELQLIKNFQ 974

Query: 956  AELFDKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLADY 1015
             ++F  FL G  +E CY AVAAVANRWLD+LD +G  +   +LID I E+ +MSK L +Y
Sbjct: 975  KDIFKVFLEGKDLESCYFAVAAVANRWLDVLDLKGAMLETEDLIDLICENKSMSKKLKEY 1034

Query: 1016 GEQKSCAVTTARRLSDFLGDTMVKDKGLRCQYIVACEPQGTPVSERAVPVAIFETDAEIM 1075
              QKS ++TTARRL +FLG+ MVKD GL+C++I++C P   PV+ERA+PVAIF  +  + 
Sbjct: 1035 EGQKSTSITTARRLGEFLGEDMVKDAGLQCKFIISCRPLNAPVTERAIPVAIFSAEMNVQ 1094

Query: 1076 KFYLRKWCKTSS--DVGIRSIVDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDW 1133
            K +LR+W   SS  D   R+I+DW YY++RL S IQKIITIPAA+Q + NPVPRV HP+W
Sbjct: 1095 KLFLRRWLVDSSLNDFDPRAIIDWEYYRERLVSVIQKIITIPAALQNIKNPVPRVDHPEW 1154

Query: 1134 LYKKVREKEDKFRQRKLVDIFSSLKKDDFLNKTCNAETNLMDENVEDLED--FPKKRRNS 1191
            L KK+   E KF+Q  +   F   KK D + +            ++D+ED  F     N+
Sbjct: 1155 LQKKIAISEGKFKQTTIGKFF---KKIDIIPQ------------IKDIEDSLFTADAPNT 1199

Query: 1192 VNGPRPIVRCFEVNNEQKTVKTTDQVDSLRQQLEPSEVSDQQPSSQNAIDTENIDRIVDY 1251
                R            K  K   QVD   + L         PS   +++        DY
Sbjct: 1200 AKAARVT----------KVRKRKRQVDQANEDL-------VLPSFMPSMEE-------DY 1235

Query: 1252 KGWLELKKRKWK-DNLDRRKKQKLGSLRASHQANGVSESLGDMINHKEAQRRTGVGSYFR 1310
              WL+ +K KWK    +R++++KL    AS++ N                 R+ +G+   
Sbjct: 1236 VEWLKYQKIKWKIQARERQRREKL--FGASNRPND----------------RSALGNIIL 1277

Query: 1311 RQETAMTRCHWQIIQLVPSSQSGVFLAWVVVEGIMVRIPITVPRLFYLNSKDPIVEKFPG 1370
            +   +     W+++Q  PS++ GV     +++G +  + + VP++ Y+N K   +   PG
Sbjct: 1278 KHAESYANSTWEVLQYKPSTEVGVVDIHALIQGKIQTLKLYVPKIIYINFKTDNLP--PG 1335

Query: 1371 -------RRVNKTLPH------GRRSFNLIEVMIDEDQFRKESKKLAALLADPEV 1412
                    + N  LP+      G RS +L ++ + E+ F  E KK +++L + ++
Sbjct: 1336 SIQNCTIEKSNAILPNNPADNGGSRS-SLFKLTVPEETFLDEEKKTSSILNNEDL 1389



 Score =  230 bits (587), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 175/669 (26%), Positives = 307/669 (45%), Gaps = 81/669 (12%)

Query: 1371 RRVNKTLPHGRRSFNLIEVMIDEDQFRKESKKLAALLAD-PEVEV---------LGWQQN 1420
            R ++K L +         +++ +  F K+ +K   +L+  P VE+         L WQ  
Sbjct: 1537 RSLSKHLENLSEEKGFQSILLLQSPFTKKLQKTIRVLSQIPTVEISMGELILPNLNWQTL 1596

Query: 1421 AAKIGMQRCAASSQWFNERISLARYAHI----------------------------LWIS 1452
              K  +    +   W +  +SL++Y +I                            LW +
Sbjct: 1597 LIKKIVNYILSLGSWVSNLVSLSKYTNIPICNLKLENLGYVIDILYSRKLKESNVVLWWN 1656

Query: 1453 D-DGVPDLGGTSEEDEC----FADEVHQPVLTYPGAYRKVSVELKIHHLSVNALLKSNQV 1507
            D   +PD GG   + +      +  +  PV+  P  Y    +EL+I++L+VN +L S  +
Sbjct: 1657 DKQPLPDYGGIQNQHDPHKMHLSMSLDSPVINNPEIYDSAVLELEINNLTVNTVLTSTLI 1716

Query: 1508 NEMEGGGLFGFDQDMNSGPYNNELCGFDETTSSAPAFRVVKQLIQRCLTDAVTSGNVFAD 1567
            NE EG      D D N+   N     F E   S  +  V++ L++    DA+   N  AD
Sbjct: 1717 NEAEGSDFGNLDIDGNAQEKN--AVRFVEDAFSNLSLNVLRSLLKDWWDDAL-GNNSTAD 1773

Query: 1568 AILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEFRKLGATIIFANFSKVIIDT 1627
            +++     W+ SP SKL D  L   +H + +K    L+ EFR LG+++++A+ +KV++ T
Sbjct: 1774 SLVHSFISWVQSPDSKLFDYTLRYHVHTLAKKALFQLMNEFRFLGSSVVYADRNKVMLKT 1833

Query: 1628 GKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLFMDQYNYGGIPA-RADESLD 1686
             K+ +  + AY   L+KA++T+ LF +++L    +W  L++MDQ+NYGG    R +E   
Sbjct: 1834 NKYSVDNSYAYGQYLIKAVRTKPLFSYLDLNIQKYWDLLIWMDQFNYGGCACLRIEEKEK 1893

Query: 1687 DDSQVDIVSSWNIAEYLPKEIQ---DHFVLVVSEFMYIPWKHAQKLAASRASLQEGSSCT 1743
             D Q    S W+I  +L    Q   D ++L++ + M    +  Q+L +++ +  + +   
Sbjct: 1894 QDIQA--YSFWHIKNFLAPIYQLEFDDWLLIILDSMIKAKRQFQELNSTQLTPLQNNQVN 1951

Query: 1744 PSITVAAAENFESHIVQYVKGEISSYFTGKLLSIVRDAIHHMKKMNNDQHNSPGVMQTAA 1803
             +      ++                FTG      +  I  +KK+  +Q       Q  A
Sbjct: 1952 GADESTPKDD---------------AFTGFTNRFSQPLIKRIKKLLKNQQEYILDPQFVA 1996

Query: 1804 NIHKVDAP----------LEFIKHVCAAFALDQNVQHDVLVMRKNLLKYVRVREFAPEAE 1853
            +      P          LE +K +C    L ++   +V  +RK LLK   +REF   AE
Sbjct: 1997 DYTATKLPGSYLEPKNPLLELVKSLCHILLLSKDHTLEVRALRKELLKVFEIREFDIIAE 2056

Query: 1854 FRDPCPSFILPNVICSYCNDCRDLDLCRDMALLAQDWHCAMPQCGQPYDREVMENALLQI 1913
            F++P  S ++ NVIC  C+  RDLD+CR+   +   + C   +C +  ++ ++E  L+Q 
Sbjct: 2057 FKNPSASLVVHNVICENCSHIRDLDMCREDPEVI--FKCQ--KCHRTLNKSLIEENLIQK 2112

Query: 1914 VRQRERLYHLQDLVCIRCNQVKAAHLAEQCACAGSFRCKEDASDFRSKMQIFLNIANRQG 1973
            ++     Y +QDL C +C +VK   ++E C C+G++            +Q+F ++A   G
Sbjct: 2113 LQSELNGYMVQDLRCGKCRRVKTDIMSEYCQCSGTWMPSISRESLAKNVQLFYSMAEYYG 2172

Query: 1974 FQLLQECTS 1982
            FQLL    S
Sbjct: 2173 FQLLLSAIS 2181


>gi|358337090|dbj|GAA28756.2| DNA polymerase epsilon subunit 1 [Clonorchis sinensis]
          Length = 2604

 Score = 1251 bits (3236), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 678/1515 (44%), Positives = 939/1515 (61%), Gaps = 141/1515 (9%)

Query: 14   TKKQKLIRSAEEEL-EAKLGYDLFSEGDKRLGWLLTFASSSLEDEDTRKVYSCIDLYFVS 72
            + + + +R+   E+ + + G++ F     R+GWL+    + + D D +++ S +D YF+ 
Sbjct: 59   SNEARFLRAKANEISDRRYGFEQFLGPGDRVGWLVNMHPTDMLD-DAKRLVSAVDFYFIQ 117

Query: 73   QDGSTFKSKYKFRPYFYAATK--EKMEMDVEAYLRRRYESQIADIEILEKEDLDLKNHLS 130
            +DGS FK    + PYF+   +     E D   YL RRY  +IA IE+++KEDLDL NHL 
Sbjct: 118  EDGSRFKVTRPYAPYFFVFVRGGPAAERDATTYLLRRYSGRIAGIEVVQKEDLDLPNHLV 177

Query: 131  GLHKSYLKISFDTVQQLMDVKKDLLHVVERNQAKFDAAEAY-----------------ES 173
            G+  +YLK+ F +V +L+ V+++L   V  NQ    +   Y                  S
Sbjct: 178  GIKATYLKLLFYSVDELVRVRRELALRVRANQELASSESTYTEMLAEHFAGNADPQTSNS 237

Query: 174  ILTGKREQRPQDFLDCIVDLREYDVPYHIRFAIDNDVRCGQWYDVSISSTGPL-LEKRVD 232
             L+ K  +   D LD I+D+RE DVPY +R  ID  V  G WY        P+ L K  +
Sbjct: 238  ALSTKDTRTRGDPLDTIMDIRESDVPYLMRVCIDLSVFAGCWYVTRCRPGLPVELLKHEE 297

Query: 233  LLQRAEVHVCAFDIETTKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEY 292
             +   E  V AFDIETTKLPLKFPDAD D IMMISYMLDG G+L+ NRE + ED+E+ E+
Sbjct: 298  TVAWPEPVVLAFDIETTKLPLKFPDADIDQIMMISYMLDGAGFLLCNREILSEDVENFEF 357

Query: 293  TPKPEFEGYFKVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFK 352
            TP+PEF G+F V N+ +E++ +R +F H+Q V+P ++VTYNGD FDWPF+E+RAAH+G  
Sbjct: 358  TPRPEFPGHFTVHNLASELDCIRFFFEHIQRVRPNVFVTYNGDMFDWPFIESRAAHYGLS 417

Query: 353  MSEELGFQCDKNQ---------GECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKL 403
            MSEE+ F   K+          GE  ++ A H+DC  WVKRDSYLP G++GLKAV KAKL
Sbjct: 418  MSEEIAFSRHKSTAGPGRSGSTGEYLSRPAVHIDCLCWVKRDSYLPVGARGLKAVAKAKL 477

Query: 404  GYDPLEVNPEDMVRFAKEKPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEV 463
             YDP+EV+PE M + A+E P+ +A+YSVSDAVATYYLYM YVHPF+F+L TI+P++PD+V
Sbjct: 478  HYDPVEVDPEVMCQMAREAPRELANYSVSDAVATYYLYMKYVHPFVFALCTILPLNPDDV 537

Query: 464  LRKGSGTLCEMLLMVQAYKANVICPNKHQ----SDP--------EKFYR----NHLLESE 507
            LRKGSGTLCE LLMVQAY ANV+ P+K      S P        E   R      L++SE
Sbjct: 538  LRKGSGTLCEALLMVQAYAANVVFPHKQTVNTDSGPGGLLPVGSEGLGRFTEDGRLIDSE 597

Query: 508  TYIGGHVECLESGVFRSDLPTSFKLDPSAYEQLLNNLDRDLQYAIKVE-GKMDLESVSN- 565
            TY+GGHVE LE+GVFR+D+P  F+L P+A E L +++ R L+ A++ E G  D +++ + 
Sbjct: 598  TYVGGHVEALEAGVFRADIPVRFRLVPAALEMLRSDVTRCLKRALQTEVGAEDDDTLHSL 657

Query: 566  -----YDEVKNAIMEKLLRLQEEPIREECPLIYHLDVAAMYPNIILTNRLQPPSIVTDEV 620
                 +++V   + E L +L   P R ECP+IYHLDV AMYPNIILTNRLQP ++ ++  
Sbjct: 658  VPKEVFNKVCRRVEESLSQLAATPNRIECPVIYHLDVGAMYPNIILTNRLQPSAVDSNST 717

Query: 621  --CTACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYYHLKKQIESE-----FVDGTNGH-- 671
              C+ C F +PG +C R + W WR E++   R + Y ++ Q+  E       D   G   
Sbjct: 718  ARCSNCQFYKPGVSCQRFMPWTWRAELWTASRPEVYRVQAQLSQERFPVKVTDAVTGQPR 777

Query: 672  -LSKSFLDLPKMEQQSRLKDRLKKYCQKAYKRVLDKPVTELREAGICMRENSFYVDTVRS 730
             + K+F +L K EQ    K RL  +C++AYKR+     TE R A IC RENSFYVDTVR+
Sbjct: 778  TMLKAFHELSKEEQLVVEKKRLTDFCRRAYKRI-HTTRTEERVAMICQRENSFYVDTVRA 836

Query: 731  FRDRRYEYKGLNKVWKGKLSEAK-----ASGNSIKIQEAQDMVVLYDSLQLAHKCILNSF 785
            FRDRRY++KGL KVWK +  EA       +G+S  ++EA  M+VLYDSLQLAHKCILNSF
Sbjct: 837  FRDRRYKFKGLTKVWKRRSDEAAAALAAGTGDSSSLKEANAMLVLYDSLQLAHKCILNSF 896

Query: 786  YGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLPGSFPEN 845
            YGYVMR+GARWYSMEMAG+V +TGA+II  +R LIE++G+ LELDTDGIWC+LP SFP+N
Sbjct: 897  YGYVMRRGARWYSMEMAGIVCHTGAQIITKSRELIEQVGRGLELDTDGIWCILPASFPQN 956

Query: 846  FTFKTKDLK-KKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEFEVDG 904
              F+T   K  +++ISYP  +LN+ V    TN+QY  L+DP + TY+  SE SI FEVDG
Sbjct: 957  LEFQTTGSKPSRISISYPGAVLNIMVQDLFTNEQYHELIDPSTMTYKVRSENSIFFEVDG 1016

Query: 905  PYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFLH 964
            PYKAM+LPA+KEEG  +KKRYAVFN DG+LAELKGFEIKR GEL+LIK+FQ+ +F+ FLH
Sbjct: 1017 PYKAMVLPAAKEEGKRLKKRYAVFNFDGSLAELKGFEIKRNGELQLIKIFQSSVFEAFLH 1076

Query: 965  GSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLADYGEQKSCAVT 1024
            G+T+ E Y++VA VA+ WLD+L ++G D+ DSEL D ISE+ +MS+ L DYG QKS +++
Sbjct: 1077 GTTLTEVYASVARVADHWLDILYSKGSDMPDSELFDLISENRSMSRRLEDYGSQKSTSLS 1136

Query: 1025 TARRLSDFLGDTMVKDKGLRCQYIVACEPQGTPVSERAVPVAIFETDAEIMKFYLRKWCK 1084
            TARR+++FLGD +VKD GL C+++++ +P+G PV+ERA+P+AIF+ +  + + YLRKW K
Sbjct: 1137 TARRMAEFLGDQIVKDAGLSCRFVISRQPEGAPVTERAIPLAIFQAEPSVKRHYLRKWLK 1196

Query: 1085 TSS---DVGIRSIVDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLYKKVREK 1141
             +S   D  +R I+DWSYY +RL S IQKIITIPAA+Q++ NPVPRV HPDWL +++ EK
Sbjct: 1197 DTSLDEDTDLRDILDWSYYLERLGSCIQKIITIPAALQQIPNPVPRVSHPDWLLRRLSEK 1256

Query: 1142 EDKFRQRKLVD-IFSSLKKDDFLNKTCNAETNLMDENVEDLEDFP-KKRRNSVNGPRP-I 1198
             D  +QRKL + +F +  K     K      N  D++  D+E+        +     P I
Sbjct: 1257 TDTCKQRKLTEMMFPATAK-----KPEQQLLNFGDKDAGDIEELSLGSDVCTTEAVHPVI 1311

Query: 1199 VRCFEVNNEQKTVK-----TTDQVDSLRQQL-EPSEVSDQQPSSQNAIDTENIDRIVDYK 1252
            VR         +VK     +       R+QL +P  + D    ++ A             
Sbjct: 1312 VRHRPSGRLGTSVKRGRSPSAGPPKPWREQLGDPPLLKDATTPAKLAT------------ 1359

Query: 1253 GWLELKKRKWKDNLDRRKKQKLGSLRASHQA----NGVSESLGDMINHKEAQRRTGVGSY 1308
             WL   + KW+   +RR+  +       HQA    N   E     +    A+R+ G+  Y
Sbjct: 1360 -WLAFHQEKWRIQAERRQYAR------KHQAQVMDNSALEDEQAALFLGAAKRQRGMERY 1412

Query: 1309 FRRQETAMTRCHWQIIQLVP-SSQSGVFLAWVVVEG-------IMVRIPITVPRLFYLNS 1360
              +   A+    WQ+I++ P   Q G + AW+ V+         +  + I VPR FY+N 
Sbjct: 1413 LTQTRLALYTSIWQLIEITPDPGQLGRYTAWISVDSADQYAPPTLHNVSILVPRRFYVNL 1472

Query: 1361 KDP----------IVEKFP------------GRRVNKTLPHGRRSFNLIEVMIDEDQFRK 1398
            + P           V   P            G    + LP     ++L E  + ED +  
Sbjct: 1473 RTPKPQDSGPLYRKVAGLPTSQNGGPAASGCGSVSGRLLPRSHSVYHLYEYNVPEDVYAI 1532

Query: 1399 ESKKLAALLADPEVE 1413
             + ++AA LA P++E
Sbjct: 1533 HASEIAADLARPDIE 1547



 Score =  164 bits (415), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 110/404 (27%), Positives = 196/404 (48%), Gaps = 50/404 (12%)

Query: 1442 LARYAHILWISDDGVPDLGGTSEEDECFADEVHQPV---LTYPGAYRKVSVELKIHHLSV 1498
            LA+  HILW S  G PDLGG   +D+    E+ +     ++ PG+Y  V+VEL++ +L+V
Sbjct: 1892 LAKQNHILWCSPTGCPDLGGKESDDQRLLLEMEEAGVIEISRPGSYPHVTVELELSNLAV 1951

Query: 1499 NALLKSNQVNEMEGGGLFGFDQ-DMNSGPYNNEL----------CGFDETTSSAPAFRVV 1547
            N LL ++++ E+EG  L  FD+ D    P   ++            +DET + + AFRV+
Sbjct: 1952 NTLLVASRIPELEGATLLSFDRLDATDRPLEEQINQGVNLGANITSYDETAACSAAFRVL 2011

Query: 1548 KQLIQRCLTDAVTSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAE 1607
            + ++   + D     N  AD  + + Y+WL SP S L+DP L R + ++M+KVF  L+ E
Sbjct: 2012 RTMVTGWVRDVTQYQNPLADEQIIYFYQWLRSPRSLLYDPALRRAVQRLMKKVFLKLVDE 2071

Query: 1608 FRKLGATIIFANFSKVIIDTGKFDLSAAKAYCDSLLKALQTR--ELFEWIELEPVHFWHS 1665
               L   +++ANFS++I+ T + +L  A A  +   + L+TR   LF  ++++ V  W  
Sbjct: 2072 LNHLNVDVVYANFSRLIVATRRMELPEALARVNHFTELLRTRPATLFAHLDMQYVRSWRQ 2131

Query: 1666 LLFMDQYNYGGIPARADESLDD---------------DSQV-------DIVSSWNIAEYL 1703
            LL+MD  N+ G+ A  +  +D                +SQ        ++   W+IA YL
Sbjct: 2132 LLWMDAANFAGVKANVESLVDGKDNEWGEYDVSGDAHESQTTTKLPEPELDMHWHIARYL 2191

Query: 1704 P--KEIQDHFVLVVSEFMYIPWKHAQKLAASRASLQEGSSCTPSITVAAAENFESHIVQY 1761
            P  + ++  F  +++ ++   +   +       SL      T   +VA    F + + Q 
Sbjct: 2192 PETRGLRAKFQTLLAGYLLSVYTAVRTEHRRLRSLHNSQMNT---SVAGVRQFGTELAQN 2248

Query: 1762 VKGEISSYFTGKLLSIVRDAIHHMKKMNNDQHNSPGVMQTAANI 1805
            ++ + ++           D       + +D   SPGV+++   +
Sbjct: 2249 IEEQGTNNSDA-------DRTSFTVALQSDASISPGVLESTEQL 2285



 Score = 82.8 bits (203), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 58/219 (26%), Positives = 91/219 (41%), Gaps = 45/219 (20%)

Query: 1812 LEFIKHVCAAFALDQNVQHDVLVMRKNLLKYVRVREFAPEAEFRDP-----CPSF----- 1861
            L+FIK +C   +L+ ++   V  +R++LL+ + V EF+PEA +  P      P       
Sbjct: 2382 LDFIKAICEILSLEPSIGRHVAGIRRDLLRLIGVGEFSPEAVWVPPHLNQETPVLGDHHT 2441

Query: 1862 -------------ILPNVICSYCNDCRDLDLCRDMALL------------AQDWHCAMPQ 1896
                          LP V C  CN  RD+D+CRD  L+               W    P 
Sbjct: 2442 TVGSSGVLRSLLVYLPEVACPTCNFTRDIDVCRDTHLVQLSDGTNLAGEPTVHWTWICPH 2501

Query: 1897 CGQPYDREVMENALLQIVRQRERLYHLQDLVCIRC---NQVKAAHLAEQCACAGSFRCK- 1952
            C   Y R  ME AL+Q + Q    + LQDL C +C     ++   LA+  + +    C  
Sbjct: 2502 CRTVYPRGRMEEALVQQLEQIALQHCLQDLQCPKCLTGGGIQETILAQGGSVSHCAECSS 2561

Query: 1953 ------EDASDFRSKMQIFLNIANRQGFQLLQECTSWIL 1985
                     +  + +  ++  I    GF  L++  SW+L
Sbjct: 2562 RLILTVSTGTTLQKRFLVYREIGTHFGFACLEQTASWLL 2600


>gi|345492705|ref|XP_001599797.2| PREDICTED: DNA polymerase epsilon catalytic subunit A-like [Nasonia
            vitripennis]
          Length = 2185

 Score = 1251 bits (3236), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 632/1240 (50%), Positives = 854/1240 (68%), Gaps = 38/1240 (3%)

Query: 195  EYDVPYHIRFAIDNDVRCGQWYDVSI--SSTGPLLEKRVDLLQRAEVHVCAFDIETTKLP 252
            E+DVP+H+R +ID  +  G+WY +    S   P+++ + ++++  E  V A+DIETTKLP
Sbjct: 159  EHDVPHHVRVSIDLKIFVGKWYSIKTRGSQEPPIIKAKPEIVEPPEPVVLAYDIETTKLP 218

Query: 253  LKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNVNNEIE 312
            LKFPDA+ D IMMISYMLDGQG+LI NRE +  D+ED E+TPKPEFEG+F V N  NE  
Sbjct: 219  LKFPDANTDQIMMISYMLDGQGFLINNREIISADVEDFEFTPKPEFEGFFTVWNEVNEKA 278

Query: 313  LLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDKNQGECRAKF 372
            +L  +F H+ EVKP I+VTYNGD+FDWPF+ETRA  HG  M + +GF  +K+ G   ++ 
Sbjct: 279  VLNKFFNHINEVKPHIFVTYNGDFFDWPFVETRAEIHGMSMKDRIGFAKNKD-GIYASRA 337

Query: 373  ACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQMMASYSVS 432
            A HLDC  WVKRDSYLP GSQ LKAV KAKL YDP+E++PE+M + A E+P++M SYSVS
Sbjct: 338  AMHLDCLCWVKRDSYLPVGSQSLKAVAKAKLRYDPVELDPEEMCKLAAEQPEVMCSYSVS 397

Query: 433  DAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVICPNKHQ 492
            DAVATYYLY  YVHPFIF+L TIIPM PDEVLRKGSGTLCE LLMV+AY+ANVI PNK +
Sbjct: 398  DAVATYYLYQKYVHPFIFALCTIIPMEPDEVLRKGSGTLCESLLMVEAYQANVIYPNKQE 457

Query: 493  SDPEKFYRN-HLLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQLLNNLDRDLQYA 551
            ++  KF  + HLL+ ETY+GGHVE LESGVFR+D+P  FK+ PSA +QL+  ++  L++A
Sbjct: 458  AELTKFTTDGHLLDIETYVGGHVEALESGVFRADIPYRFKIIPSAVDQLIAGVENALKHA 517

Query: 552  IKVEGKMDLESVSNYDEVKNAIMEKLLRLQEEPIREECPLIYHLDVAAMYPNIILTNRLQ 611
            I+ E K+ L  V+N+DE+   I  KL  L+ +P+R E P+IYHLDV AMYPNIILTNRLQ
Sbjct: 518  IEEEEKVPLADVTNFDEIVKEIKGKLESLRAQPLRTEKPIIYHLDVGAMYPNIILTNRLQ 577

Query: 612  PPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYYHLKKQIESE-FVDGTNG 670
            P ++V + VC ACDFN+P   C R +EW+WRGE       +Y   ++Q+E E F     G
Sbjct: 578  PYAMVDESVCAACDFNKPDAMCQRNMEWMWRGEYLKASAGEYQRTQQQLEMEKFPPLIPG 637

Query: 671  HLSKSFLDLPKMEQQSRLKDRLKKYCQKAYKRVLDKPVTELREAGICMRENSFYVDTVRS 730
               ++F +L K EQ +  K RL +YC++ YK+V  +  TE+R   IC RENSFYVDTVR+
Sbjct: 638  GKHRAFHELSKQEQAAIEKKRLSEYCRRTYKKV-KETRTEVRTQTICQRENSFYVDTVRA 696

Query: 731  FRDRRYEYKGLNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHKCILNSFYGYVM 790
            FRDRRYEYKG+ K  K ++++A A+ ++ +I++A+   VL+DSLQLAHKCILNSFYGYVM
Sbjct: 697  FRDRRYEYKGMTKKAKAQVAQAIANNDAAEIKKAKSREVLFDSLQLAHKCILNSFYGYVM 756

Query: 791  RKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLPGSFPENFTFKT 850
            RKG+RW+SMEM G+V YTGA II  AR +IE++G+PLELDTDGIWC+LPGSFP+NF  K 
Sbjct: 757  RKGSRWFSMEMGGIVCYTGAHIIMRAREIIEQVGRPLELDTDGIWCILPGSFPDNFVVKL 816

Query: 851  KDLKK-KLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEFEVDGPYKAM 909
             + KK K+ +SYP  +LN  V    TNDQY  LVDP +  Y+  SE SI FEVDGPY AM
Sbjct: 817  NNPKKPKMVVSYPNAVLNFMVKDLFTNDQYHELVDPANCEYKIRSENSIFFEVDGPYLAM 876

Query: 910  ILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFLHGSTIE 969
            +LPA+KEEG  +KKRYAVFN DG+LAELKGFE+KRRGEL+LIK+FQ+ +F+ FL G+T+E
Sbjct: 877  VLPAAKEEGKKLKKRYAVFNFDGSLAELKGFEVKRRGELRLIKIFQSSVFEAFLKGTTLE 936

Query: 970  ECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLADYGEQKSCAVTTARRL 1029
            ECY++VA VAN WLD+L ++G  + D+EL D ISE+ +MSK L +YG QKS +++TA+RL
Sbjct: 937  ECYASVAKVANYWLDVLYSKGSSLPDAELFDLISENKSMSKKLDEYGAQKSTSISTAKRL 996

Query: 1030 SDFLGDTMVKDKGLRCQYIVACEPQGTPVSERAVPVAIFETDAEIMKFYLRKWCKTSS-- 1087
            ++FLGD MVKD GL CQYI++ +P G+PV+ERA+P+AIF++D  + + YLR+W K  S  
Sbjct: 997  AEFLGDEMVKDAGLACQYIISQKPLGSPVTERAIPLAIFQSDPSVARHYLRRWLKDPSIQ 1056

Query: 1088 DVGIRSIVDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLYKKVREKEDKFRQ 1147
            ++ IR I+DW YY +RL SAIQKIITIPAA+Q VSNPVPRV HPDWL+KK+ EK D  +Q
Sbjct: 1057 EIDIREILDWKYYIERLGSAIQKIITIPAALQGVSNPVPRVQHPDWLHKKMLEKTDGRKQ 1116

Query: 1148 RKLVDIFS------SLKKDDFLNKTCNAETNLMDENVEDLEDF-----PKKRRNSVNGPR 1196
            RK+ DIF       + + ++  +   +++ +   ++V D+EDF       K R  V    
Sbjct: 1117 RKITDIFQVDENYKANQNNEDSDTGSDSDGDKTADSVPDMEDFGNEGGSNKHRGVVATVT 1176

Query: 1197 PIVRCFEVNNEQKTVK-TTDQVDSLRQQLEPSEVSDQQPSSQNAIDTENIDRIVDYKGWL 1255
               R F  ++E++  K  T   D+ R+ L      +  P  + A          + + WL
Sbjct: 1177 KRKRAFSDDDEEEAPKENTLLTDNWRKVL-----GNPPPMGETA---------EELRAWL 1222

Query: 1256 ELKKRKWKDNLDRRKKQKLGSLRASHQANGVSESLGDMINHKEAQRRTGVGSYFRRQETA 1315
            E  K KWK    +R ++K        + +    + G    HK       +G + +R +  
Sbjct: 1223 EFHKEKWKYQAKQRAERKKQCATKRKKFDNNPHTAGHARPHKNPTSNL-LGGFLQRAQQK 1281

Query: 1316 MTRCHWQIIQLVPSSQSGVFLAWVVVEGIMVRIPITVPRLFYLNSKDPIVEKFPG--RRV 1373
            +    WQIIQ+  +++ G+F  W++V+  +  I +TVPR+FY+N +    E      ++ 
Sbjct: 1282 LLETPWQIIQIYETNEPGLFRMWILVDKELHHIRLTVPRIFYVNIRTERKESEASLWKKC 1341

Query: 1374 NKTLPHGRRSFNLIEVMIDEDQFRKESKKLAALLADPEVE 1413
            +KTLP  R   +L    + E  F+  S+ L   L DP++E
Sbjct: 1342 HKTLPRSRPVHHLYRYSVPEQYFKTHSQTLMNDLIDPDIE 1381



 Score =  269 bits (687), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 177/632 (28%), Positives = 302/632 (47%), Gaps = 93/632 (14%)

Query: 1413 EVLGWQQNAAKIGMQRCAASSQWFNERISLARYAH------------------------- 1447
            + L WQ+  +K+ ++    S     + +  ARY +                         
Sbjct: 1584 DTLDWQRTGSKMLLRHYFKSEDVLKQLVEQARYFYAPVGNLPPDVVIFGADLFYARHLQK 1643

Query: 1448 ---ILWISDDGVPDLGGTSEEDECFADEVHQP---VLTYPGAYRKVSVELKIHHLSVNAL 1501
               +LW S    PD GG+  +D     +  +    +   PG Y  V  EL +  L+V AL
Sbjct: 1644 ANFVLWWSPTEKPDFGGSENDDSRLLTDFEESSGCLKNNPGVYSNVCFELDVISLAVTAL 1703

Query: 1502 LKSNQVNEMEGGGLF-GFD-------QDM----NSGPYNNELCGFDETTSSAPAFRVVKQ 1549
            +++N +N+++G   +  F        QDM     S P    +  +DET    PAFR+++ 
Sbjct: 1704 VQANHINDIDGTSSYVAFHNAQQTSLQDMVTNDGSAP---SIPSYDETALCGPAFRILRL 1760

Query: 1550 LIQRCLTDAVTSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEFR 1609
            ++   L +     N FAD +L H YRWL SP S L+DP L R LH   +K+F  L++E +
Sbjct: 1761 MVATWLKEVSNFKNPFADFLLIHFYRWLRSPTSFLYDPALRRTLHNYSKKLFVQLVSELQ 1820

Query: 1610 KLGATIIFANFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLFM 1669
            +LGATIIFA+F+K+I+ T K     A  Y   +++++  +E+F  I  +  + W  L+++
Sbjct: 1821 RLGATIIFADFTKIILCTKKRVTEDAYGYTQFIIQSILNKEIFHSIHFDVRNCWEYLIWL 1880

Query: 1670 DQYNYGGIP------ARADESLDDDSQVDIVSSWNIAEYLPKEI-QDHFVLVVSEFMYIP 1722
            D  N+ G+           ES + D +++ + +W++ +Y+P EI Q  F   +S +    
Sbjct: 1881 DLSNHAGVKKCLQNEGNTQESEEGD-KIEFIMNWSMIDYIPIEICQATFTKTISAYFGNI 1939

Query: 1723 WKHAQKLAASRASLQEGSSCTPSITVAAAENFES-----HIVQYVKGEISSYFTGKLLSI 1777
            +   Q             + +P      A N  S      + QY++  I   F  K+L++
Sbjct: 1940 YTEMQ-------------TKSPEAITEFARNLVSGDMSQKLFQYIQS-IHKKFPEKVLTV 1985

Query: 1778 VRDAIHHMKKMNNDQHNSPGVMQTAANIHKVDAPLEFIKHVCAAFALDQNVQHDVLVMRK 1837
              +   H+   NN    +            ++  LE  K +C   +LD  ++ +V  + K
Sbjct: 1986 --EEYPHLDFENNSTKIT------------INPALELSKAICKVLSLDSQIEQEVENLHK 2031

Query: 1838 NLLKYVRVREFAPEAEFRDPCPSFILPNVICSYCNDCRDLDLCRDMALLAQD----WHCA 1893
            NLL+ + V  F+ +AE++DPC SFILP V+C  CN  RD+DLC+D     +D    W C 
Sbjct: 2032 NLLRLIDVGAFSDKAEWKDPCISFILPEVLCENCNHVRDIDLCKDTFQDIEDNKHVWKC- 2090

Query: 1894 MPQCGQPYDREVMENALLQIVRQRERLYHLQDLVCIRCNQVKAAHLAEQCACAGSFRCKE 1953
             P C   YD   +E +LL  + ++   Y +QD+ C++C++VK  ++A +C+C+G F+   
Sbjct: 2091 -PNCELVYDNNQIEFSLLDTLNRKSMAYIIQDVQCLKCSEVKQDNIAARCSCSGFFKTLL 2149

Query: 1954 DASDFRSKMQIFLNIANRQGFQLLQECTSWIL 1985
                F   ++IF  I+ +    +L E   ++L
Sbjct: 2150 PRDKFVRTLKIFRMISTKCQMPILAESVQFML 2181



 Score = 70.9 bits (172), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 36/128 (28%), Positives = 74/128 (57%), Gaps = 6/128 (4%)

Query: 5   RWDRQDGRRTKKQKLIRSAEEELEAKLGYDLFSEGDKRLGWLLTFASSSLEDEDTRKVYS 64
           R +  +GR  + ++ I+     ++A  G+   ++  +R+G+L+   ++ +  ED +++ +
Sbjct: 27  RENTAEGRLNQVKENIK-----IDALYGFHRVTDVRERIGFLINMHTTDIV-EDDKQLVT 80

Query: 65  CIDLYFVSQDGSTFKSKYKFRPYFYAATKEKMEMDVEAYLRRRYESQIADIEILEKEDLD 124
            +D YF+ +D + FK    + PYFY   ++    +V  +L +++   +  +EI+ KEDLD
Sbjct: 81  GVDYYFLQEDCTRFKVSLPYHPYFYILCRDGSNQEVITFLLKKFNGFLLKVEIVTKEDLD 140

Query: 125 LKNHLSGL 132
           L NHL+GL
Sbjct: 141 LPNHLTGL 148


>gi|290980239|ref|XP_002672840.1| predicted protein [Naegleria gruberi]
 gi|284086419|gb|EFC40096.1| predicted protein [Naegleria gruberi]
          Length = 2160

 Score = 1250 bits (3235), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 624/1168 (53%), Positives = 816/1168 (69%), Gaps = 77/1168 (6%)

Query: 38   EGDKRLGWLLTFASSSL------------EDEDTRKV-YSCIDLYFVSQDGSTFKSKYKF 84
            EG K LGWL+ F ++S+            +D ++  +  + + LYF+S +G +F     F
Sbjct: 63   EGTKNLGWLVNFRATSVPEKLTMGGSGGEDDANSSDMDLAAVVLYFMSDEGDSFSVTKVF 122

Query: 85   RPYFYAATKEKMEM-DVEAYLRRRYESQIADIEILEKEDLDLKNHLSGLHKSYLKISFDT 143
             PYFY A K+     +V  YL       I  ++I++KEDLD  NHLSG+   YLK+ F  
Sbjct: 123  EPYFYIAVKDDNSFTEVCNYLTSM--DPIVSLDIVDKEDLDKVNHLSGIKAKYLKLRFKN 180

Query: 144  VQQLMDVKKDLLHVVERNQAK---------------------FDAAEAYESILTGKREQR 182
            VQQLM+++  LL ++E+N+ K                      D  + YE  +  KR+ +
Sbjct: 181  VQQLMEMRSKLLPIIEKNKKKSQDSFELLEEELLNEEMEDQFLDDLDDYERGIRRKRKAK 240

Query: 183  PQ--DFLDCIVDLREYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLLEKRVDLLQRAEVH 240
                D +D IVD+REYD+ YHIR AID D+R G WYD+S+     L+ KR D+ +RA   
Sbjct: 241  LSTIDCVDKIVDIREYDIKYHIRCAIDTDLRVGYWYDISVEEGNVLISKREDIEERAVPK 300

Query: 241  VCAFDIETTKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEG 300
            VCAFDIETTK PL FPD   D IMMISYM+DG GYLI+NRE V EDIE+ +YTPK EF G
Sbjct: 301  VCAFDIETTKPPLMFPDPQSDRIMMISYMIDGHGYLIVNREIVAEDIENFDYTPKDEFPG 360

Query: 301  YFKVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQ 360
            YF+V NV NE ELL  WF+HMQE KP +YVTYNGD+FDWPF+E RA+ +   + + +G+ 
Sbjct: 361  YFEVFNVENEKELLLKWFSHMQEEKPCVYVTYNGDFFDWPFIEQRASVYSLNLRDHVGYY 420

Query: 361  CDKNQGECR---------AKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVN 411
              +  G+C+         + F  H+DC  WV RDSYLPQGS GLKAVTKAKL YDP+EV+
Sbjct: 421  --RMSGDCKKLGSDTLYGSSFGLHIDCLYWVIRDSYLPQGSHGLKAVTKAKLKYDPIEVD 478

Query: 412  PEDMVRFAKEKPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTL 471
            PEDM+ FA  +PQ +ASYSVSDAV+TYYLYM Y++PFIFSL  IIPM PDEVLRKGSGTL
Sbjct: 479  PEDMLPFATSQPQKLASYSVSDAVSTYYLYMKYINPFIFSLCNIIPMPPDEVLRKGSGTL 538

Query: 472  CEMLLMVQAYKANVICPNKHQSDPEKFYRNHLLESETYIGGHVECLESGVFRSDLPTSFK 531
            CE LLMVQA+K N+I PN++QSDPEK Y+ HLL SETYIGG VE L+SGV+RSD+P  FK
Sbjct: 539  CETLLMVQAFKGNIIFPNRYQSDPEKMYKGHLLASETYIGGRVEGLKSGVYRSDIPYKFK 598

Query: 532  LDPSAYEQLLNNLDRDLQYAIKVEGKMDLESVSNYDEVKNAIMEKLLRLQEEPIREECPL 591
            L+P  Y+QL++N+DR +++AI+VE ++ +E V+N++E+K  I++ LL+L+E+P REECP 
Sbjct: 599  LNPDRYQQLVDNVDRVIRFAIEVEQQLKVEDVANFEELKQEIIDGLLKLKEKPEREECPK 658

Query: 592  IYHLDVAAMYPNIILTNRLQPPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEIFMGKRS 651
            +YHLDV AMYPNIILT+RLQP +IV ++ C  C +N+P   C R ++W +R E F   RS
Sbjct: 659  LYHLDVGAMYPNIILTHRLQPSAIVNEDTCAQCIYNKPENDCKRIMKWHFRAEYFTASRS 718

Query: 652  DYYHLKKQIESEFVDGTNGHLSKSFLDLPKMEQQSRLKDRLKKYCQKAYKRVLDKPVTEL 711
            ++   K  + ++  + TN  L K                R+ +  QKA+K+  +K  + +
Sbjct: 719  EFNIAKNSLMNDNPNFTNEELRK----------------RVGEISQKAHKKKYNKE-SMV 761

Query: 712  REAGICMRENSFYVDTVRSFRDRRYEYKGLNKVWKGKLSEAKASGNSIKIQEAQDMVVLY 771
            ++A IC REN FYV+TVR FRDRRY  K  +K WK K  + +        ++++ M+VLY
Sbjct: 762  KDATICQRENPFYVNTVREFRDRRYVLKDKSKEWKDKSKDPEFE------EKSKVMLVLY 815

Query: 772  DSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDT 831
            DSLQLAHKCILNSFYGYVMRK ARWYSMEMAGVVTY GA+II+ AR LI+ IG  LELDT
Sbjct: 816  DSLQLAHKCILNSFYGYVMRKAARWYSMEMAGVVTYNGAQIIRMARELIDDIGISLELDT 875

Query: 832  DGIWCVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYE 891
            DGIWC+LPGSFPEN+T K  + KK+ TISYPC+MLN DVA+N +NDQYQ   +P +  ++
Sbjct: 876  DGIWCMLPGSFPENYTLKLTNGKKR-TISYPCLMLNADVAQNFSNDQYQNF-NPETGKWD 933

Query: 892  THSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLI 951
              +ECSI FEVDGPY+AMILPASKEEG  IKKRYAVFN DGTLAELKGFEIKRRGELKLI
Sbjct: 934  KRAECSIFFEVDGPYRAMILPASKEEGKSIKKRYAVFNHDGTLAELKGFEIKRRGELKLI 993

Query: 952  KVFQAELFDKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKS 1011
            K+FQ+++F++FL G ++ ECY  VA +ANRWLD+L  +G+ I   +L DYI+ESS MSK 
Sbjct: 994  KIFQSQVFEQFLKGYSLSECYQHVAEIANRWLDILYTKGEGIETKQLFDYITESSNMSKR 1053

Query: 1012 LADYGEQKSCAVTTARRLSDFLGDTMVKDKGLRCQYIVACEPQGTPVSERAVPVAIFETD 1071
            L +YG QK+  +T A+RL D  G+ MV+DKGL C YIVA +P+   V+ER +P  +F+ +
Sbjct: 1054 LEEYGNQKAARITAAKRLVDLFGEQMVRDKGLVCSYIVAKKPENASVTERVIPTVVFQKE 1113

Query: 1072 AEIMKFYLRKWCKTSS--DVGIRSIVDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVV 1129
              +   +L+KW K +S  ++ ++ IVDW YY +RL SAIQKIITIPAA+Q + NPVPRV 
Sbjct: 1114 ESVCLSFLKKWTKDTSMTEIDLKEIVDWDYYIERLGSAIQKIITIPAALQAIDNPVPRVK 1173

Query: 1130 HPDWLYKKVREKEDKFRQRKLVDIFSSL 1157
            HPDWL KK+RE   + +QR L+D+   +
Sbjct: 1174 HPDWLLKKLRENASQSKQRSLMDMLKKI 1201



 Score =  238 bits (606), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 155/562 (27%), Positives = 275/562 (48%), Gaps = 82/562 (14%)

Query: 1447 HILWISDDGVPDLGGTSEEDECFADEVHQPVL--------------TYPGAYRKVSVELK 1492
            ++LW+S    PDLGG      C  D + Q  L               +   Y  V VE  
Sbjct: 1656 YVLWLSKANKPDLGG------CENDALQQQALLSDDQLYSRSGTFINHSACYHSVCVEFD 1709

Query: 1493 IHHLSVNALLKSNQVNEMEGGGLFGFDQDMNSGPYNNELCGFDETTSSAPAFRVVKQLIQ 1552
            I HL +NA+L+S+ + E         D+  NS  +          ++    F++ KQ++ 
Sbjct: 1710 ISHLDINAILQSSFIEETID------DKISNSSKF----------STVTEIFKIFKQVVS 1753

Query: 1553 RCLTDAVTSGNV---FADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEFR 1609
            +   D     N      D +L +LYRW C+ H+KL  P +   ++++ +KVF  L A F+
Sbjct: 1754 KMFADVHNDDNTCPDVPDLLLSNLYRWCCNTHAKLFHPEILAFIYRLQKKVFLQLCAHFK 1813

Query: 1610 KLGATIIFANFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLFM 1669
            K G  II+ANF+K+I+DTGK     AK Y D L  ++Q ++LF W+++E  + W +LL+ 
Sbjct: 1814 KCGCRIIYANFTKIIVDTGKNTTDEAKVYTDYLKSSIQQQKLFTWVDIEVKNTWSNLLWF 1873

Query: 1670 DQYNYGGIP--ARADESLDDDSQVDIVSSWNIAEYLPKEIQDHFVLVVSEFMYIPWKHAQ 1727
            +Q N+ G       +  L  D  +D++S       LP+ ++ H V  +S +MY   K+  
Sbjct: 1874 NQDNFLGFKEDQETETGLSSDPHIDLLSE------LPESVRVHLVFYLSTYMYECLKY-- 1925

Query: 1728 KLAASRASLQEGSSCTPSITVAAAENFESHIVQYVKGEISSYFTGKLLSIVRDAIHHMKK 1787
                 R SL E  S   +  V   +  E H  +Y    +++ F+  L+ ++ + +  +  
Sbjct: 1926 -----RRSLDEKISTMKAEEVQKIQ--EEHAQEY----LTTKFSEGLMEVMSNQLKELS- 1973

Query: 1788 MNNDQHNSPGVMQTAANIHKVDAPLEFIKHVCAAFALDQNVQHDVLVMRKNLLKYVRVRE 1847
                       +Q  +   + D  LEF+  +C   ++D  ++ +V V++++LLK + V+E
Sbjct: 1974 -----------LQLES---EKDIRLEFVNAICHMLSIDLFIRDEVNVLKRSLLKLLGVKE 2019

Query: 1848 FAPEAEFRDPCPSFILPNVICSYCNDCRDLDLCRDMALLAQDWHCAMPQCGQPYDREVME 1907
            F+ E+ F+     F +P++ICS+C+ C DL+L +        + C    C   +D+ ++E
Sbjct: 2020 FSSESMFKRSQNIFKVPDMICSFCSSCCDLELGKPTT--ENIFKCK--HCSNDFDKSLIE 2075

Query: 1908 NALLQIVRQRERLYHLQDLVCIRCNQVKAAHLAEQCACAG---SFRCKEDASDFRSKMQI 1964
              L+  V+ +   Y LQDL C RC+Q+ A ++ E+C C+G   S + +  +      + +
Sbjct: 2076 GRLIDYVQNKMVGYQLQDLQCSRCSQINANNVLERCHCSGKWISAQVENKSEKVADTIHL 2135

Query: 1965 FLNIANRQGFQLLQECTSWILE 1986
              +I+ +  F  L E  S++L+
Sbjct: 2136 IHSISQQHNFDTLNEIISYMLK 2157


>gi|336269226|ref|XP_003349374.1| hypothetical protein SMAC_06069 [Sordaria macrospora k-hell]
          Length = 2198

 Score = 1249 bits (3232), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 661/1419 (46%), Positives = 890/1419 (62%), Gaps = 137/1419 (9%)

Query: 22   SAEEELEAKLGYDLFSEGDKRLGWLLTFASSSLEDE--DTRKVYSCIDLYFVSQDGSTFK 79
            +A   ++  +G+  +  G KR GWL+   +++++D         + +D YF+ +DGSTFK
Sbjct: 32   AASASIDENMGFARYDAGKKREGWLVNVQATAIDDPRIPGGGGRAALDCYFIEEDGSTFK 91

Query: 80   SKYKFRPYFYAATKEKMEMDVEAYLRRRYESQ-IADIEILEKEDLDLKNHLSGLHKSYLK 138
            +  ++ PYF  A ++  E +VE + +R      +  I  +EKEDL + NHL G  +++L+
Sbjct: 92   ATVEYEPYFLVACRKGHEGEVEEWCKRVPGGGCVKSIRRVEKEDLKMPNHLLGYRRTFLE 151

Query: 139  ISFDTVQQLMDVKKDLLHVVERNQAKFDAAEAYESILTG-----------KREQRPQDF- 186
            + F  VQ LM  K+D++ + E+N+   DA + Y  + +            + ++R  +  
Sbjct: 152  LRFHNVQDLMSAKRDVMPIAEKNKEGMDAMDTYAEVASANGGFDLFDDDSRNDERRHNAG 211

Query: 187  ----LDCIVDLREYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLLEKRVDLLQRAEVHVC 242
                 D IVD+REYDVPYH+R  ID D+R  +WY V   +    ++   + L  A+  V 
Sbjct: 212  FAEASDFIVDIREYDVPYHVRVMIDLDIRVARWYHVEAKNGVTTIKVNEERLAMADPVVM 271

Query: 243  AFDIETTKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYF 302
            A+DIETTKLPLKFPDA  D IMM+SYM+DGQG+LI NRE + EDI D +YTPKPE++G F
Sbjct: 272  AYDIETTKLPLKFPDAAIDQIMMVSYMIDGQGFLITNREIISEDISDFDYTPKPEYQGPF 331

Query: 303  KVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCD 362
             + N  +E  L+  +F H++E +P +  TYNGD+FDWPF+E RA+ +G  M  E+G++ D
Sbjct: 332  MIFNEPDEKALIERFFLHIKEARPTVIATYNGDFFDWPFVEARASINGIDMYHEIGWKKD 391

Query: 363  KNQGECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEK 422
             ++ + +  ++ H+DCF WV RDSYLPQGS+GLKAVT AKLGYDP E++PE M  +A E+
Sbjct: 392  -SEDQYKCNYSVHMDCFHWVNRDSYLPQGSRGLKAVTVAKLGYDPDELDPELMTPYASER 450

Query: 423  PQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYK 482
            PQ +A YSVSDAVATYYLYM YVHPFIFSL TI+P+ PD+ LRKG+GTLCEMLLMVQAY+
Sbjct: 451  PQTLAEYSVSDAVATYYLYMKYVHPFIFSLCTILPLGPDDTLRKGTGTLCEMLLMVQAYQ 510

Query: 483  ANVICPNKHQSDPEKFYRNHLLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQLLN 542
              ++ PNKH    E F+  HLL+SET                                  
Sbjct: 511  KEIVLPNKHVQPKESFWEGHLLDSET---------------------------------- 536

Query: 543  NLDRDLQYAIKVEGKMDLESVSNYDEVKNAIMEKLLRLQEEPIREECPLIYHLDVAAMYP 602
                     I VE K +L  ++NYDEVK  I  +L+ L+E P R E PLIYHLDVA+MYP
Sbjct: 537  ---------ITVEEKKELSDITNYDEVKKQITARLVNLKETPNRLERPLIYHLDVASMYP 587

Query: 603  NIILTNRLQPPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYYHLKKQIES 662
            NI+ TNRLQP S++++  C ACDFNRPGKTC R+L W WRGE    KR +Y  ++  +E+
Sbjct: 588  NIMTTNRLQPDSMISESNCAACDFNRPGKTCDRRLPWAWRGEYLPAKRDEYNMIRHALEN 647

Query: 663  EFVDGTNGHLS-KSFLDLPKMEQQSRLKDRLKKYCQKAYKRVLDKPVTELREAGICMREN 721
            E   G   +   +SF DL   EQ + ++ RL+ Y QK Y ++ D   T +REA IC REN
Sbjct: 648  ERFPGKYPNSPMRSFQDLSADEQATLIRKRLQLYSQKVYHKIHDS-TTIVREAIICQREN 706

Query: 722  SFYVDTVRSFRDRRYEYKGLNKVWKGKLSEAKASGNSI-KIQEAQDMVVLYDSLQLAHKC 780
             FY++TVR FRDRRY+YKG  KVWKGK    K +G S  ++  A+ M++L+DSLQLAHK 
Sbjct: 707  PFYINTVRDFRDRRYDYKGKAKVWKGKTDALKTAGASASEVDNAKKMIILFDSLQLAHKV 766

Query: 781  ILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLPG 840
            ILNSFYGYVMRKG+RWYSMEMAGV   TGA IIQ AR LI+++G+PLELDTDGIWC+LP 
Sbjct: 767  ILNSFYGYVMRKGSRWYSMEMAGVTCLTGATIIQLARQLIDRLGRPLELDTDGIWCMLPA 826

Query: 841  SFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEF 900
            +FPENF FK K+  KK+TISYPCVMLN  V    TN QYQ LVDP +  YETHS+ SI F
Sbjct: 827  TFPENFVFKLKN-GKKMTISYPCVMLNHLVHDKFTNHQYQDLVDPKTFKYETHSDNSIFF 885

Query: 901  EVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFD 960
            EVDGPYK M+LP SKEE   +KKRYAVFNDDG+LAELKGFE+KRRGELKLIK+FQ ++F 
Sbjct: 886  EVDGPYKCMVLPTSKEEDKNLKKRYAVFNDDGSLAELKGFEVKRRGELKLIKIFQQQIFK 945

Query: 961  KFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLADYGEQKS 1020
             FL G+T+ ECY+AVA VANRWLD+L ++G  +AD EL++ ISE+ +MSK+L +YG QKS
Sbjct: 946  FFLEGTTLAECYTAVAKVANRWLDVLHSKGATLADEELMELISENRSMSKTLEEYGSQKS 1005

Query: 1021 CAVTTARRLSDFLGDTMVKDKGLRCQYIVACEPQGTPVSERAVPVAIFETDAEIMKFYLR 1080
             ++TTARRL+DFLG+ MVKDKGL C++I+   P+  PV+ERAVPVAIF  + E  + YL+
Sbjct: 1006 TSITTARRLADFLGEQMVKDKGLNCKFIICARPKNAPVTERAVPVAIFSAEEETKRMYLK 1065

Query: 1081 KWCKTS-SDVGIRSIVDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLYKKVR 1139
            KW K   +D   R+++DW YY +RL S IQK+ITIPAA+QKV NPVPRV HPDWL +++ 
Sbjct: 1066 KWLKEEPADTDPRALLDWDYYLERLGSVIQKLITIPAALQKVRNPVPRVPHPDWLQRRIN 1125

Query: 1140 EKEDKFRQRKLVDIFSSLKKDDFLNKTCNAETNLMDENVEDLEDFPKKRRNSVNGPRPIV 1199
             KEDK +Q+KL D+F    K    + T +A +      + D+EDF        N  +P  
Sbjct: 1126 IKEDKMKQKKLTDLFGPTTKGPLQDITHHANST----QLGDMEDFG-------NLLKPKT 1174

Query: 1200 RCFEVNNEQKTVKTTDQVDSLRQQLEPSEVSDQQPSSQNAIDTENIDRIVDYKGWLELKK 1259
                ++  QKT     + D      EP+   +  P +  A+  +      DY  +LE +K
Sbjct: 1175 VSDAISATQKTASAQKRKDP-----EPAAAENLDPFA--ALPPKMPSPSEDYAAFLEYQK 1227

Query: 1260 RKWKDNLDRRKKQKLGSLRASHQANGVSESLGDMINHKEAQRRTGVGSYFRRQETAMTRC 1319
            +KWK     R                             A+RR                 
Sbjct: 1228 QKWKLQKQAR-----------------------------ARRR----------------- 1241

Query: 1320 HWQIIQLVPSSQSGVFLAWVVVEGIMVRIPITVPRLFYLNSK-----DPIVEKFPGRRVN 1374
            H  ++QL  S   G+  A V+++  +  + I VPR  +LN K     D  VE     +VN
Sbjct: 1242 HLSLLQLRASDSPGIVTAHVLIDAKIHTLKINVPRQVFLNLKSRDLPDIEVEGCHVEQVN 1301

Query: 1375 KTLPHGRRSFNLIEVMIDEDQFRKESKKLAALLADPEVE 1413
             TLP+G  S +L ++ + ED +  E++K + L   P VE
Sbjct: 1302 HTLPNGHSSVHLFKLTVPEDIYFAEAEKFSLLFNHPSVE 1340



 Score =  229 bits (583), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 166/665 (24%), Positives = 290/665 (43%), Gaps = 109/665 (16%)

Query: 1408 ADPEVEVLGWQQNAAKIGMQRCAASSQWFNERISLARYAHI------------------- 1448
             D  +  LGWQ   A+  +    +   W     +LARY  +                   
Sbjct: 1537 GDSSLPPLGWQSVVARRLVNHYLSLGSWITHMTALARYGDVPLCNLERDDPRFLIDIAYA 1596

Query: 1449 ---------LWISDDGVPDLGGTSEEDECFA-DEVHQPVLTYPGAYRKVSVELKIHHLSV 1498
                     LW S    PD  G  ++D     D+V  P +  PG Y  V ++L++ +L++
Sbjct: 1597 RRLMANNVVLWWSPSPRPDHAGYEKDDVVGPLDQVQMPSVNNPGTYASVCIDLEVRNLAI 1656

Query: 1499 NALLKSNQVNEMEGGGLFGFDQDMNS-GPYNNELCGFDETTSSAPAFRVVKQLIQRCLTD 1557
            N +L S+ +NE+EG     F+   +S G  + E   + E   +    +V++++++    +
Sbjct: 1657 NTILTSSLINELEGADSISFNPAADSNGNGDGEEFLYSENAFANAGVQVLREMVKSWWAE 1716

Query: 1558 AVTSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEFRKLGATIIF 1617
            A   G+  AD ++QHL RW+ SP S L+D  LH  +  + +K    L+A+FR++G+ +IF
Sbjct: 1717 AC-KGSTMADVMVQHLVRWVESPASCLYDRALHYYVQMMSRKALLQLMADFRRVGSHVIF 1775

Query: 1618 ANFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLFMDQYNYGGI 1677
            A+ +++++ T K ++  A AY   +LK+++ + LF +I+LE   +W  L++ D++NYGG 
Sbjct: 1776 ASSNRLLLQTTKSEVGNAYAYAQYILKSIKGKPLFHFIDLEIKEYWDYLVWYDEFNYGG- 1834

Query: 1678 PARADESLDDDSQ-VDIVSSWNIAEYLPKEIQDHFVLVVSEFMYIPWKHAQKLAASRASL 1736
                 E L+ D Q + ++  W +A +LP  +Q  F   V EF+ +   H  K    R S 
Sbjct: 1835 -KATQEVLEQDEQDLQMIMHWQMATFLPVRLQPIFRDWVVEFIQL--MHGIK----RPSF 1887

Query: 1737 QEGSSCTPSIT----------------VAAAENFESHIVQYVKGEISS------------ 1768
                + TP +T                +   + FE  + + +   I++            
Sbjct: 1888 GSDPTATPRLTQLPVNMRGGEDGAVGQIILGKAFEKPLKKEIANLINTQNRELLHPELAG 1947

Query: 1769 -YFTGKLLSIVRDAIHHMKKMNNDQHNSP-GVMQTAANIHKVDAPLEFIKHVCAAFALDQ 1826
             Y   +L       +      ++   N+  G  + AA+ + V   LE +K +    +LD+
Sbjct: 1948 DYTFPQLPGSHLSHLSSSTSKSSMTKNAAGGGKKVAASANPV---LELVKALMQVLSLDK 2004

Query: 1827 NVQHDVLVMRKNLLKYVRVREFAPEAEFRDPCPSFILPNVICSYCNDCRDLDLCRDMALL 1886
            N+  +  ++RK LL    VREF+ +  F++P  S  L    C  C   RD+DLCRD   +
Sbjct: 2005 NITLEARLLRKELLAMFDVREFSKDGAFQNPSESLRLAQFSCDNCTMARDIDLCRDEDFM 2064

Query: 1887 AQD----------------------------------WHCAMPQCGQPYDREVMENALLQ 1912
                                                 W C  P C   YDR  +E  L+ 
Sbjct: 2065 GSSAAAAASDALGGGGGGAAELDGGQQGQGQGQEKGRWKC--PYCEMDYDRNEIEERLVA 2122

Query: 1913 IVRQRERLYHLQDLVCIRCNQVKAAHLAEQCACAGSFRCKEDASDFRSKMQIFLNIANRQ 1972
             V      +  QDL C RC  ++     E C C+G +R      +   +++++ N+A   
Sbjct: 2123 EVEAMVVEWTTQDLKCGRCGALRVNEFMEHCTCSGEWRELVKREEVMRRLKVYRNVARYY 2182

Query: 1973 GFQLL 1977
            G ++L
Sbjct: 2183 GLRML 2187


>gi|374109438|gb|AEY98344.1| FAFR657Cp [Ashbya gossypii FDAG1]
          Length = 2180

 Score = 1246 bits (3223), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 657/1394 (47%), Positives = 894/1394 (64%), Gaps = 100/1394 (7%)

Query: 41   KRLGWLLTFASSSLEDEDTRKV----YSCIDLYFVSQDGSTFKSKYKFRPYFYAATKEKM 96
            +R+GWL     + + DE          + +D YF+ ++G +FKS   + PYF  + ++  
Sbjct: 63   ERIGWLCNMHPTVVADELNAGASGVGVAGVDFYFLDEEGGSFKSTILYDPYFLLSCQDSN 122

Query: 97   EM-DVEAYLRRRYESQIADIEILEKEDLDLKNHLSGLHKSYLKISFDTVQQLMDVKKDLL 155
             + DVE +L++  E  +  +E+++K+DL + NHL GL ++ LK++F     L + +K L 
Sbjct: 123  RVHDVEEFLKKYLEGCLKTVEVVQKDDLAMDNHLVGLKRTLLKLNFVNTNNLFEARKLLR 182

Query: 156  HVVERNQAKFDAAEAYESILTGKREQRPQDFLDCIVDLREYDVPYHIRFAIDNDVRCGQW 215
             +++ N+      + Y    T  R    +D    I D+REYDVPYH+R  ID ++R G+W
Sbjct: 183  PILKDNEENQQQRDIYSLNDTTNR----RDAKMLIDDIREYDVPYHVRVCIDKEIRVGKW 238

Query: 216  YDVSISSTGPLLEKRVDLLQRAEVHVCAFDIETTKLPLKFPDADYDIIMMISYMLDGQGY 275
            Y V+   +G L+E   D +  A+  V AFDIETTK PLKFPD+  D IMMISYM+DG+GY
Sbjct: 239  YRVT---SGGLVE-YTDKVAFADPVVLAFDIETTKAPLKFPDSAIDQIMMISYMIDGEGY 294

Query: 276  LIINRECVGEDIEDLEYTPKPEFEGYFKVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGD 335
            LI NRE + EDIED EYTPKPE++G F V N  +E  LL  +F H+++V+P +  T+NGD
Sbjct: 295  LITNREIISEDIEDFEYTPKPEYQGLFTVFNEEDERSLLERFFEHIRDVRPTVISTFNGD 354

Query: 336  YFDWPFLETRAAHHGFKMSEELGFQCDKNQGECRAKFACHLDCFAWVKRDSYLPQGSQGL 395
            +FDWPF+E R+   G  M +E+GF  D ++GE ++ +  H+DC+ WVKRDSYLPQGSQGL
Sbjct: 355  FFDWPFVEARSKIRGLSMFDEIGFAPD-SEGEYKSSYCAHMDCYRWVKRDSYLPQGSQGL 413

Query: 396  KAVTKAKLGYDPLEVNPEDMVRFAKEKPQMMASYSVSDAVATYYLYMTYVHPFIFSLATI 455
            KAVT+ KLGY+P+E++PE M  +A EKPQ ++ YSVSDAVATYYLYM YVHPFIFSL T+
Sbjct: 414  KAVTQVKLGYNPIELDPELMTPYAYEKPQHLSEYSVSDAVATYYLYMKYVHPFIFSLCTV 473

Query: 456  IPMSPDEVLRKGSGTLCEMLLMVQAYKANVICPNKHQSDPEKFYRNHLLESETYIGGHVE 515
            +P++PDEVLRKG+GTLCEMLLMVQAY   ++ PNKH    E+FY  HLLESETY+GGHVE
Sbjct: 474  LPLNPDEVLRKGTGTLCEMLLMVQAYDHGILLPNKHTEPIERFYDGHLLESETYVGGHVE 533

Query: 516  CLESGVFRSDLPTSFKLDPSAYEQLLNNLDRDLQYAIKVEGKMDLESVSNYDEVKNAIME 575
             LE+GVFRSD+   F +D +A ++LL +L   L++ I+VE K  +E V +++++ N I E
Sbjct: 534  SLEAGVFRSDIDCDFTIDSTAIDELLQDLPHALKFCIEVENKTKVEDVLDFEDILNTITE 593

Query: 576  KLLRLQEEPIREECPLIYHLDVAAMYPNIILTNRLQPPSIVTDEVCTACDFNRPGKTCLR 635
            +L  L+    R+E PLIYH+DVA+MYPNI+ TNRLQP S+ T+  C +CDFNRPGK C R
Sbjct: 594  QLQELKMNNKRKELPLIYHVDVASMYPNIMTTNRLQPDSMKTERDCASCDFNRPGKKCDR 653

Query: 636  KLEWVWRGEIFMGKRSDYYHLKKQIESEFVDGTNGHLSKSFL---DLPKMEQQSRLKDRL 692
            +L+W WRGE    K  +Y  +K+ + +E       + +K  L   +L   EQ S +K RL
Sbjct: 654  RLKWTWRGEFLPAKMDEYAMVKRALMNEVFPNKYKNTTKKLLTFDELSYSEQVSHIKKRL 713

Query: 693  KKYCQKAYKRVLDKPVTE--LREAGICMRENSFYVDTVRSFRDRRYEYKGLNKVWKGKLS 750
             +Y +K Y RV    VTE  +RE+ +C REN FYV+TVRSFRDRRYE+KG  K WK KLS
Sbjct: 714  SEYSRKVYHRV---KVTESVVRESIVCQRENPFYVNTVRSFRDRRYEFKGHAKTWKKKLS 770

Query: 751  EAKASGNSIKIQEAQDMVVLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGA 810
            +     + +   EA+ M+VLYDSLQLAHK ILNSFYGY MRKG+RWYS+EMAG+   TGA
Sbjct: 771  QIDPE-DKVARDEARKMIVLYDSLQLAHKVILNSFYGYAMRKGSRWYSIEMAGITCSTGA 829

Query: 811  KIIQNARLLIEKIGKPLELDTDGIWCVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDV 870
             IIQ AR L+E+IG+PLELDTDGIWC++P SFPENF F  K+  KKL +SYPC MLN  V
Sbjct: 830  TIIQMARALVERIGRPLELDTDGIWCIIPRSFPENFEFTLKN-GKKLYLSYPCSMLNYKV 888

Query: 871  ARNNTNDQYQTLVDPVSKTYETHSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFND 930
             ++ TN QYQ LV+     Y+  S+ SI FEVDGPYKAMILP SKEEG  IKKRYAVFN+
Sbjct: 889  HQSFTNHQYQELVNDAKHKYKISSDNSIFFEVDGPYKAMILPTSKEEGKGIKKRYAVFNE 948

Query: 931  DGTLAELKGFEIKRRGELKLIKVFQAELFDKFLHGSTIEECYSAVAAVANRWLDLLDNQG 990
            DG+LAELKGFE+KRRGEL+LIK FQ ++F  FL G T+EECY AVA VANRWLD+LD++G
Sbjct: 949  DGSLAELKGFELKRRGELQLIKNFQQDIFKVFLEGRTLEECYGAVAKVANRWLDILDSKG 1008

Query: 991  KDIADSELIDYISESSTMSKSLADYGEQKSCAVTTARRLSDFLGDTMVKDKGLRCQYIVA 1050
              +   +LID I E+ +MSK L +Y  QKS ++TTARRL +FLG  MVKD GL+C++I++
Sbjct: 1009 SMLETEDLIDLICENKSMSKKLKEYDGQKSTSITTARRLGEFLGQEMVKDAGLQCKFIIS 1068

Query: 1051 CEPQGTPVSERAVPVAIFETDAEIMKFYLRKWCKTSS--DVGIRSIVDWSYYKQRLSSAI 1108
             +P   PV+ERA+PVAIF  D  I K +LRKW   SS  +  +R+I+DW+YY++RL+S I
Sbjct: 1069 SKPANAPVTERAIPVAIFSADHNIKKLFLRKWLLDSSLDNFDLRAILDWNYYRERLASVI 1128

Query: 1109 QKIITIPAAMQKVSNPVPRVVHPDWLYKKVREKEDKFRQRKLVDIFSSLKKDDFLNKTCN 1168
            QKIITIPAA+Q V+NPVPRV HP+WL KK+   E KF+Q  +   F              
Sbjct: 1129 QKIITIPAALQNVNNPVPRVDHPEWLRKKIATSESKFKQTSIGRFFK------------- 1175

Query: 1169 AETNLMDENVEDLEDFPKKRRNSVNGPRPIVRCFEVNNEQKTVKTTDQVDSLRQQLEPSE 1228
             ++N M E + D+ED                     + E  +     +V + +++   +E
Sbjct: 1176 -KSNGMPE-IADIEDNA------------------FSTESSSGAKVARVVTKKKRKRENE 1215

Query: 1229 VSDQQ---PSSQNAIDTENIDRIVDYKGWLELKKRKWKDNLDRRKKQKLGSLRASHQANG 1285
              D Q   PS   AID        DY GWL  +K KW+   + R ++K        Q  G
Sbjct: 1216 TKDNQPVLPSVMPAIDE-------DYVGWLNYQKIKWQLQAEERHRRK--------QLFG 1260

Query: 1286 VSESLGDMINHKEAQRRTGVGSYFRRQETAMTRCHWQIIQLVPSSQSGVFLAWVVVEGIM 1345
             S +L D         R+ +G+  ++   +     W+I+Q   SS+ GV     ++ G +
Sbjct: 1261 SSSTLND---------RSALGNIIKKHAESYANSDWEILQYKNSSEPGVVEVHALISGKV 1311

Query: 1346 VRIPITVPRLFYLNSKDPIVEKFPG-------RRVNKTLPHGRR-SFN----LIEVMIDE 1393
              +   + +  +L  K   +   PG        + N  LP+ +  S+N    L  V   E
Sbjct: 1312 QSLKFHIHKTVFLKFKTDTLP--PGGIPNCVIEKSNAILPNTKEDSYNTSSSLFRVTCPE 1369

Query: 1394 DQFRKESKKLAALL 1407
              F  E  K++++ 
Sbjct: 1370 TVFLDEQNKVSSVF 1383



 Score =  199 bits (505), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 138/538 (25%), Positives = 256/538 (47%), Gaps = 25/538 (4%)

Query: 1448 ILWISDDGVPDLGGTSEEDE----CFADEVHQPVLTYPGAYRKVSVELKIHHLSVNALLK 1503
            + W     +PD GG   E        A ++  PV+  P  Y    +E+++++L VN +L 
Sbjct: 1652 LWWNQKQPLPDRGGIQNEYNPHTLSLATDLTSPVINNPEFYDSAVLEIEVNNLLVNTILT 1711

Query: 1504 SNQVNEMEGGGLFGFDQDMNSGPYNNELCGFDETTSSAPAFRVVKQLIQRCLTDAVTSGN 1563
            S  +NE EGG + G +     G       GF E   S  +  +++ L++    DA+ + N
Sbjct: 1712 STLINEAEGGDVAGPESGGREG------GGFVEDAFSTASVNILRSLLKDLWDDALQN-N 1764

Query: 1564 VFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEFRKLGATIIFANFSKV 1623
              AD+++     W+ S  SKL D  L   ++ + +K    L+ EFR +G+ ++F + +K+
Sbjct: 1765 STADSLVHSFIGWVQSVDSKLFDYTLRYYVNMLTKKALFQLINEFRFMGSQVVFLDRNKI 1824

Query: 1624 IIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLFMDQYNYGGIPARADE 1683
            ++ T K  +  + AY   L+KA++TR LF +++L+ V +W  LL+MDQYN+GG      E
Sbjct: 1825 LLKTSKNTIDNSYAYGQYLIKAIRTRPLFSYLDLKIVRYWDILLWMDQYNHGGCACLKIE 1884

Query: 1684 SLDDDSQVDIVSSWNIAEYLPKEIQDHF---VLVVSEFMYIPWKHAQKLAASRASLQEGS 1740
               +   +   SSW+I  +L    Q  F   ++++ + M    +   +L+ ++   Q   
Sbjct: 1885 E-KERQDIQAYSSWHIKNFLAPIYQQEFDDWLVIILDSMIKCKQQFYELSGTQRLTQ--- 1940

Query: 1741 SCTPSITVAAAENFESHIVQYVKGEISSYFTGKLLSIVRDAIHHMKKMN-NDQHNSPGVM 1799
               P+ + AA E+ E+ +           F  ++  + +    ++   +    +  P + 
Sbjct: 1941 --LPNRSQAADEDDENSVFAGFTKRFYQPFINRISKLYKTQQEYILDPHFRADYIIPDLP 1998

Query: 1800 QTAANIHKVDAPLEFIKHVCAAFALDQNVQHDVLVMRKNLLKYVRVREFAPEAEFRDPCP 1859
                 +   +  LE +K +C    L +    +V  +RK  L+   +REF   A F +P  
Sbjct: 1999 GRNPKMKAGNPLLELVKSLCHVLLLCKERTLEVRALRKEALEVFEIREFDSSASFENPAS 2058

Query: 1860 SFILPNVICSYCNDCRDLDLCRDMALLAQDWHCAMPQCGQPYDREVMENALLQIVRQRER 1919
            S I+ N +C  C    DLD+C  M+ L   + C+  +C +   +  +E  L+Q ++ +  
Sbjct: 2059 SLIINNFMCENCAYFSDLDIC--MSDLRSMFKCS--KCYRTLRKPFIEENLIQKLQIQTI 2114

Query: 1920 LYHLQDLVCIRCNQVKAAHLAEQCACAGSFRCKEDASDFRSKMQIFLNIANRQGFQLL 1977
             Y  QDL C +C ++K+  ++  C C+G +        +   +Q+F ++A   GF LL
Sbjct: 2115 AYISQDLRCAKCRKIKSDTMSAYCTCSGKWVQTISKDTYLKNVQLFYHVAEYFGFSLL 2172


>gi|302309022|ref|NP_986205.2| AFR657Cp [Ashbya gossypii ATCC 10895]
 gi|442570135|sp|Q752B8.2|DPOE_ASHGO RecName: Full=DNA polymerase epsilon catalytic subunit A; AltName:
            Full=DNA polymerase II subunit A
 gi|299790907|gb|AAS54029.2| AFR657Cp [Ashbya gossypii ATCC 10895]
          Length = 2180

 Score = 1246 bits (3223), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 657/1394 (47%), Positives = 894/1394 (64%), Gaps = 100/1394 (7%)

Query: 41   KRLGWLLTFASSSLEDEDTRKV----YSCIDLYFVSQDGSTFKSKYKFRPYFYAATKEKM 96
            +R+GWL     + + DE          + +D YF+ ++G +FKS   + PYF  + ++  
Sbjct: 63   ERIGWLCNMHPTVVADELNAGASGVGVAGVDFYFLDEEGGSFKSTILYDPYFLLSCQDSN 122

Query: 97   EM-DVEAYLRRRYESQIADIEILEKEDLDLKNHLSGLHKSYLKISFDTVQQLMDVKKDLL 155
             + DVE +L++  E  +  +E+++K+DL + NHL GL ++ LK++F     L + +K L 
Sbjct: 123  RVHDVEEFLKKYLEGCLKTVEVVQKDDLAMDNHLVGLKRTLLKLNFVNTNNLFEARKLLR 182

Query: 156  HVVERNQAKFDAAEAYESILTGKREQRPQDFLDCIVDLREYDVPYHIRFAIDNDVRCGQW 215
             +++ N+      + Y    T  R    +D    I D+REYDVPYH+R  ID ++R G+W
Sbjct: 183  PILKDNEENQQQRDIYSLNDTTNR----RDAKMLIDDIREYDVPYHVRVCIDKEIRVGKW 238

Query: 216  YDVSISSTGPLLEKRVDLLQRAEVHVCAFDIETTKLPLKFPDADYDIIMMISYMLDGQGY 275
            Y V+   +G L+E   D +  A+  V AFDIETTK PLKFPD+  D IMMISYM+DG+GY
Sbjct: 239  YRVT---SGGLVE-YTDKVAFADPVVLAFDIETTKAPLKFPDSAIDQIMMISYMIDGEGY 294

Query: 276  LIINRECVGEDIEDLEYTPKPEFEGYFKVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGD 335
            LI NRE + EDIED EYTPKPE++G F V N  +E  LL  +F H+++V+P +  T+NGD
Sbjct: 295  LITNREIISEDIEDFEYTPKPEYQGLFTVFNEEDERSLLERFFEHIRDVRPTVISTFNGD 354

Query: 336  YFDWPFLETRAAHHGFKMSEELGFQCDKNQGECRAKFACHLDCFAWVKRDSYLPQGSQGL 395
            +FDWPF+E R+   G  M +E+GF  D ++GE ++ +  H+DC+ WVKRDSYLPQGSQGL
Sbjct: 355  FFDWPFVEARSKIRGLSMFDEIGFAPD-SEGEYKSSYCAHMDCYRWVKRDSYLPQGSQGL 413

Query: 396  KAVTKAKLGYDPLEVNPEDMVRFAKEKPQMMASYSVSDAVATYYLYMTYVHPFIFSLATI 455
            KAVT+ KLGY+P+E++PE M  +A EKPQ ++ YSVSDAVATYYLYM YVHPFIFSL T+
Sbjct: 414  KAVTQVKLGYNPIELDPELMTPYAYEKPQHLSEYSVSDAVATYYLYMKYVHPFIFSLCTV 473

Query: 456  IPMSPDEVLRKGSGTLCEMLLMVQAYKANVICPNKHQSDPEKFYRNHLLESETYIGGHVE 515
            +P++PDEVLRKG+GTLCEMLLMVQAY   ++ PNKH    E+FY  HLLESETY+GGHVE
Sbjct: 474  LPLNPDEVLRKGTGTLCEMLLMVQAYDHGILLPNKHTEPIERFYDGHLLESETYVGGHVE 533

Query: 516  CLESGVFRSDLPTSFKLDPSAYEQLLNNLDRDLQYAIKVEGKMDLESVSNYDEVKNAIME 575
             LE+GVFRSD+   F +D +A ++LL +L   L++ I+VE K  +E V +++++ N I E
Sbjct: 534  SLEAGVFRSDIDCDFTIDSTAIDELLQDLPHALKFCIEVENKTKVEDVLDFEDILNTITE 593

Query: 576  KLLRLQEEPIREECPLIYHLDVAAMYPNIILTNRLQPPSIVTDEVCTACDFNRPGKTCLR 635
            +L  L+    R+E PLIYH+DVA+MYPNI+ TNRLQP S+ T+  C +CDFNRPGK C R
Sbjct: 594  QLQELKMNNKRKELPLIYHVDVASMYPNIMTTNRLQPDSMKTERDCASCDFNRPGKKCDR 653

Query: 636  KLEWVWRGEIFMGKRSDYYHLKKQIESEFVDGTNGHLSKSFL---DLPKMEQQSRLKDRL 692
            +L+W WRGE    K  +Y  +K+ + +E       + +K  L   +L   EQ S +K RL
Sbjct: 654  RLKWTWRGEFLPAKMDEYAMVKRALMNEVFPNKYKNTTKKLLTFDELSYSEQVSHIKKRL 713

Query: 693  KKYCQKAYKRVLDKPVTE--LREAGICMRENSFYVDTVRSFRDRRYEYKGLNKVWKGKLS 750
             +Y +K Y RV    VTE  +RE+ +C REN FYV+TVRSFRDRRYE+KG  K WK KLS
Sbjct: 714  SEYSRKVYHRV---KVTESVVRESIVCQRENPFYVNTVRSFRDRRYEFKGHAKTWKKKLS 770

Query: 751  EAKASGNSIKIQEAQDMVVLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGA 810
            +     + +   EA+ M+VLYDSLQLAHK ILNSFYGY MRKG+RWYS+EMAG+   TGA
Sbjct: 771  QIDPE-DKVARDEARKMIVLYDSLQLAHKVILNSFYGYAMRKGSRWYSIEMAGITCSTGA 829

Query: 811  KIIQNARLLIEKIGKPLELDTDGIWCVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDV 870
             IIQ AR L+E+IG+PLELDTDGIWC++P SFPENF F  K+  KKL +SYPC MLN  V
Sbjct: 830  TIIQMARALVERIGRPLELDTDGIWCIIPRSFPENFEFTLKN-GKKLYLSYPCSMLNYKV 888

Query: 871  ARNNTNDQYQTLVDPVSKTYETHSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFND 930
             ++ TN QYQ LV+     Y+  S+ SI FEVDGPYKAMILP SKEEG  IKKRYAVFN+
Sbjct: 889  HQSFTNHQYQELVNDAKHKYKISSDNSIFFEVDGPYKAMILPTSKEEGKGIKKRYAVFNE 948

Query: 931  DGTLAELKGFEIKRRGELKLIKVFQAELFDKFLHGSTIEECYSAVAAVANRWLDLLDNQG 990
            DG+LAELKGFE+KRRGEL+LIK FQ ++F  FL G T+EECY AVA VANRWLD+LD++G
Sbjct: 949  DGSLAELKGFELKRRGELQLIKNFQQDIFKVFLEGRTLEECYGAVAKVANRWLDILDSKG 1008

Query: 991  KDIADSELIDYISESSTMSKSLADYGEQKSCAVTTARRLSDFLGDTMVKDKGLRCQYIVA 1050
              +   +LID I E+ +MSK L +Y  QKS ++TTARRL +FLG  MVKD GL+C++I++
Sbjct: 1009 SMLETEDLIDLICENKSMSKKLKEYDGQKSTSITTARRLGEFLGQEMVKDAGLQCKFIIS 1068

Query: 1051 CEPQGTPVSERAVPVAIFETDAEIMKFYLRKWCKTSS--DVGIRSIVDWSYYKQRLSSAI 1108
             +P   PV+ERA+PVAIF  D  I K +LRKW   SS  +  +R+I+DW+YY++RL+S I
Sbjct: 1069 SKPANAPVTERAIPVAIFSADHNIKKLFLRKWLLDSSLDNFDLRAILDWNYYRERLASVI 1128

Query: 1109 QKIITIPAAMQKVSNPVPRVVHPDWLYKKVREKEDKFRQRKLVDIFSSLKKDDFLNKTCN 1168
            QKIITIPAA+Q V+NPVPRV HP+WL KK+   E KF+Q  +   F              
Sbjct: 1129 QKIITIPAALQNVNNPVPRVDHPEWLRKKIATSESKFKQTSIGRFFK------------- 1175

Query: 1169 AETNLMDENVEDLEDFPKKRRNSVNGPRPIVRCFEVNNEQKTVKTTDQVDSLRQQLEPSE 1228
             ++N M E + D+ED                     + E  +     +V + +++   +E
Sbjct: 1176 -KSNGMPE-IADIEDNA------------------FSTESSSGAKVARVVTKKKRKRENE 1215

Query: 1229 VSDQQ---PSSQNAIDTENIDRIVDYKGWLELKKRKWKDNLDRRKKQKLGSLRASHQANG 1285
              D Q   PS   AID        DY GWL  +K KW+   + R ++K        Q  G
Sbjct: 1216 TKDNQPVLPSVMPAIDE-------DYVGWLNYQKIKWQLQAEERHRRK--------QLFG 1260

Query: 1286 VSESLGDMINHKEAQRRTGVGSYFRRQETAMTRCHWQIIQLVPSSQSGVFLAWVVVEGIM 1345
             S +L D         R+ +G+  ++   +     W+I+Q   SS+ GV     ++ G +
Sbjct: 1261 SSSTLND---------RSALGNIIKKHAESYANSDWEILQYKNSSEPGVVEVHALISGKV 1311

Query: 1346 VRIPITVPRLFYLNSKDPIVEKFPG-------RRVNKTLPHGRR-SFN----LIEVMIDE 1393
              +   + +  +L  K   +   PG        + N  LP+ +  S+N    L  V   E
Sbjct: 1312 QSLKFHIHKTVFLKFKTDTLP--PGGIPNCVIEKSNAILPNTKEDSYNTSSSLFRVTCPE 1369

Query: 1394 DQFRKESKKLAALL 1407
              F  E  K++++ 
Sbjct: 1370 TVFLDEQNKVSSVF 1383



 Score =  201 bits (511), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 139/538 (25%), Positives = 256/538 (47%), Gaps = 25/538 (4%)

Query: 1448 ILWISDDGVPDLGGTSEEDE----CFADEVHQPVLTYPGAYRKVSVELKIHHLSVNALLK 1503
            + W     +PD GG   E        A ++  PV+  P  Y    +E+++++L VN +L 
Sbjct: 1652 LWWNQKQPLPDRGGIQNEYNPHTLSLATDLTSPVINNPEFYDSAVLEIEVNNLLVNTILT 1711

Query: 1504 SNQVNEMEGGGLFGFDQDMNSGPYNNELCGFDETTSSAPAFRVVKQLIQRCLTDAVTSGN 1563
            S  +NE EGG + G +     G       GF E   S  +  +++ L++    DA+ + N
Sbjct: 1712 STLINEAEGGDVAGPESGGREG------GGFVEDAFSTASVNILRSLLKDLWDDALQN-N 1764

Query: 1564 VFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEFRKLGATIIFANFSKV 1623
              AD+++     W+ S  SKL D  L   ++ + +K    L+ EFR +G+ ++F + +K+
Sbjct: 1765 STADSLVHSFIGWVQSVDSKLFDYTLRYYVNMLTKKALFQLINEFRFMGSQVVFLDRNKI 1824

Query: 1624 IIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLFMDQYNYGGIPARADE 1683
            ++ T K  +  + AY   L+KA++TR LF +++L+ V +W  LL+MDQYN+GG      E
Sbjct: 1825 LLKTSKNTIDNSYAYGQYLIKAIRTRPLFSYLDLKIVRYWDILLWMDQYNHGGCACLKIE 1884

Query: 1684 SLDDDSQVDIVSSWNIAEYLPKEIQDHF---VLVVSEFMYIPWKHAQKLAASRASLQEGS 1740
               +   +   SSW+I  +L    Q  F   ++++ + M    +   +L+ ++   Q   
Sbjct: 1885 E-KERQDIQAYSSWHIKNFLAPIYQQEFDDWLVIILDSMIKCKQQFYELSGTQRLTQ--- 1940

Query: 1741 SCTPSITVAAAENFESHIVQYVKGEISSYFTGKLLSIVRDAIHHMKKMN-NDQHNSPGVM 1799
               P+ + AA E+ E+ +           F  ++  + +    ++   N    +  P + 
Sbjct: 1941 --LPNRSQAADEDDENSVFAGFTKRFYQPFINRISKLYKTQQEYILDPNFRADYIIPDLP 1998

Query: 1800 QTAANIHKVDAPLEFIKHVCAAFALDQNVQHDVLVMRKNLLKYVRVREFAPEAEFRDPCP 1859
                 +   +  LE +K +C    L +    +V  +RK  L+   +REF   A F +P  
Sbjct: 1999 GRNPKMKAGNPLLELVKSLCHVLLLCKERTLEVRALRKEALEVFEIREFDSSASFENPAS 2058

Query: 1860 SFILPNVICSYCNDCRDLDLCRDMALLAQDWHCAMPQCGQPYDREVMENALLQIVRQRER 1919
            S I+ N +C  C    DLD+C  M+ L   + C+  +C +   +  +E  L+Q ++ +  
Sbjct: 2059 SLIINNFMCENCAYFSDLDIC--MSDLRSMFKCS--KCYRTLRKPFIEENLIQKLQIQTI 2114

Query: 1920 LYHLQDLVCIRCNQVKAAHLAEQCACAGSFRCKEDASDFRSKMQIFLNIANRQGFQLL 1977
             Y  QDL C +C ++K+  ++  C C+G +        +   +Q+F ++A   GF LL
Sbjct: 2115 AYISQDLRCAKCRKIKSDTMSAYCTCSGKWVQTISKDTYLKNVQLFYHVAEYFGFSLL 2172


>gi|322789347|gb|EFZ14659.1| hypothetical protein SINV_08892 [Solenopsis invicta]
          Length = 2261

 Score = 1244 bits (3219), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 668/1432 (46%), Positives = 928/1432 (64%), Gaps = 85/1432 (5%)

Query: 27   LEAKLGYDLFSEGDKRLGWLLTFASSSLEDEDTRKVYSCIDLYFVSQDGSTFKSKYKFRP 86
            ++A  G+   ++  +R+G+LL   ++ + ++D R V S +D YF+ +D + FK    F P
Sbjct: 45   VDAVYGFRRVTDSKERIGFLLNMHATEIAEDDKRLV-SGVDYYFIEEDATRFKVSVPFSP 103

Query: 87   YFYAATKEKMEMDVEAYLRRRYESQIADIEILEKEDLDLKNHLSGLHKSYLKISFDTVQQ 146
            YFY   ++    +V  +L ++Y   +  IE + KEDLDL NHL GL + YLK+SF  +  
Sbjct: 104  YFYILCRKNTYEEVSTFLSKKYMGILTKIETVYKEDLDLPNHLIGLKQKYLKLSFANIFD 163

Query: 147  LMDVKKDLLHVVERNQAKFDAAEAYESILTGKREQRPQ------DFLDCIVDLREYDVPY 200
            L  VK++++ VV  N+ +  +   Y  +L    +   Q      D +D I+D+RE+DVP+
Sbjct: 164  LTKVKRNIMRVVRVNKEREKSNTYYTDMLATTLQPNEQESKQTLDHMDNILDIREHDVPH 223

Query: 201  HIRFAIDNDVRCGQWYDVSISSTGP-LLEKRVDLLQRAEVHVCAFDIETTKLPLKFPDAD 259
            H+R +ID ++ CG WY V      P ++ ++ D+++  E  V A+DIETTKLPLKFPD+ 
Sbjct: 224  HVRVSIDANIFCGIWYSVKTKGNDPPIITRKKDMIEPPEPIVLAYDIETTKLPLKFPDSS 283

Query: 260  YDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNVNNEIELLRLWFA 319
             D IMMISYM+DG+GYLI NRE +  DIE+ EYTPKPEFEG F V N  NE   +  +F 
Sbjct: 284  IDQIMMISYMIDGEGYLITNRELISADIENFEYTPKPEFEGPFTVFNEPNEKAAITKFFD 343

Query: 320  HMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDKNQGECRAKFA------ 373
            H+ E++P I+VTYNGD+FDWPF+E RAA H   M E++GF  ++        F       
Sbjct: 344  HINEIRPHIFVTYNGDFFDWPFVEARAAIHNMDMKEKIGFYKNREGVYVNLLFYNYFILL 403

Query: 374  ---CHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQMMASYS 430
                H    +WV+RDSYLP GSQ LKAV KAKL YDP+E++PEDM R A E+P+ +A+YS
Sbjct: 404  YKYYHKTFLSWVRRDSYLPVGSQNLKAVAKAKLRYDPVELDPEDMCRLASEEPETLANYS 463

Query: 431  VSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLR-------KGSGTLCEMLLMVQAYKA 483
            VSDAVAT+YLY  Y+HPFIF+L TIIPM PDEV +       KGSGTLCE LLMVQA++A
Sbjct: 464  VSDAVATFYLYQKYIHPFIFALCTIIPMEPDEVSKIFVNVHVKGSGTLCESLLMVQAFQA 523

Query: 484  NVICPNKHQSDPEKFYRN-HLLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQLLN 542
            N+I PNK +++  K  ++ HLL+ ETY+GGHVE LESGVFR+D+P  FK+ P+A ++L+N
Sbjct: 524  NIIFPNKQETELNKLTKDGHLLDQETYVGGHVEALESGVFRADIPCRFKIVPNAIDELIN 583

Query: 543  NLDRDLQYAIKVEGKMDLESVSNYDEVKNAIMEKLLRLQEEPIREECPLIYHLDVAAMYP 602
             ++  L++ I+ E K+ ++ V+N++E+ + +  KL  L+ +P+R E P+IYHLDV AMYP
Sbjct: 584  GVENALKHTIQEEEKVSIDMVTNFNEIVDEVKGKLKELKNQPLRLENPVIYHLDVGAMYP 643

Query: 603  NIILTNRLQPPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGE--------IFMGKRSDYY 654
            NIILTNRLQP +IV +  C  CD+N+P   C R ++W+WRGE               +Y 
Sbjct: 644  NIILTNRLQPSAIVNEMDCAVCDYNKPDALCQRNMKWMWRGEYCKFGYNITMAASLGEYQ 703

Query: 655  HLKKQIESE-FVDGTNGHLSKSFLDLPKMEQQSRLKDRLKKYCQKAYKRVLDKPVTELRE 713
             +K+Q+E E F     G   ++F +LP  EQ +  K+RL +YC+KAYK+     + E R 
Sbjct: 704  RVKQQLEIERFPPQFPGGPKRAFHELPIKEQATFQKNRLTEYCKKAYKKAKITRMEE-RT 762

Query: 714  AGICMRENSFYVDTVRSFRDRRYEYKGLNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDS 773
              IC +ENSFYVDTVR+FRDRRYEYK L KV K +++ A A G++  I+ A++  VLYDS
Sbjct: 763  QTICQKENSFYVDTVRAFRDRRYEYKALTKVAKRQVAAAIAKGDAADIKSAKNREVLYDS 822

Query: 774  LQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDG 833
            LQLAHKCILNSFYGYVMRKGARW+SMEM G+V YTGA II+ AR +IE+IG+PLELDTDG
Sbjct: 823  LQLAHKCILNSFYGYVMRKGARWHSMEMGGIVCYTGAHIIRKAREIIEQIGRPLELDTDG 882

Query: 834  IWCVLPGSFPENFTFKTKDLKK-KLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYET 892
            IWC+LP SFP++    T   KK K TISYP  +LN  V    TN+ Y  LVD  + TYE 
Sbjct: 883  IWCILPASFPDSLIVHTTHEKKSKFTISYPNAVLNFMVKDQFTNEVYHDLVDKDNLTYEI 942

Query: 893  HSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIK 952
             SE SI FEVDGPY AM+LPA+KEEG  +KKRYAVFN DG+LAELKGFE+KRRGEL+LIK
Sbjct: 943  RSENSIFFEVDGPYLAMVLPAAKEEGKKLKKRYAVFNFDGSLAELKGFEVKRRGELQLIK 1002

Query: 953  VFQAELFDKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSL 1012
            +FQA +F+ FL G+T+EECY++VA  A+ WLDLL ++  ++ DSEL + ISE+ +MS+ L
Sbjct: 1003 IFQASVFESFLKGNTLEECYASVAKDADYWLDLLYSKCANMPDSELFELISENKSMSRKL 1062

Query: 1013 ADYGEQKSCAVTTARRLSDFLGDTMVKDKGLRCQYIVACEPQGTPVSERAVPVAIFETDA 1072
             DYG QKS +++TA+RL++FLGD MVKD GL C+YI+A +PQ  PV+ERA+P+AIF+++ 
Sbjct: 1063 EDYGAQKSTSISTAKRLAEFLGDEMVKDAGLACRYIIANKPQSAPVTERAIPLAIFQSEL 1122

Query: 1073 EIMKFYLRKWCK--TSSDVGIRSIVDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVH 1130
             + + YL+KW K  T     IR I+DW+YY +RL SAIQKIITIPAAMQ ++NPVPRV H
Sbjct: 1123 AVRRHYLKKWLKDPTLYSDDIRDILDWNYYIERLGSAIQKIITIPAAMQGLANPVPRVQH 1182

Query: 1131 PDWLYKKVREKEDKFRQRKLVDIFS-SLKKDDFLNKTCNAETNLMDENVEDLEDFPKKRR 1189
            P WL+KKV EK    RQ+K+ DIFS  +K+    + T         E   D+ED      
Sbjct: 1183 PPWLHKKVSEKSMSHRQKKITDIFSVKVKEPSHASNT---------EEPRDIED------ 1227

Query: 1190 NSVNGPRPIVRC-FEVNNEQKTVKTTDQVDSLRQQLEPSEVSDQQPSSQNAIDTENIDRI 1248
              + GP    +    V N++K     D+ + +R +     +    P       T   +RI
Sbjct: 1228 --IAGPSTSFKTPVSVVNKRKR-HHLDEDEEIRARSWKEALGSPPPKG-----TTRQERI 1279

Query: 1249 VDYKGWLELKKRKWKDNLDRR--KKQKLGSLRASHQANGVSESLGDMINHKEAQRRTGVG 1306
                 WLE  K+KW     +R   +QK   +  + Q      S G +I +      TG  
Sbjct: 1280 ----KWLEFHKKKWAFQAKQRHQHRQKRSKIDETDQI-----SWG-VIRNTNTSTMTG-- 1327

Query: 1307 SYFRRQETAMTRCHWQIIQLVPSSQSGVFLAWVVVEGIMVRIPITVPRLFYLNSKDPIVE 1366
             + RR +  +    WQIIQL  + + G+F  W++V+  + ++ + +PR+FY+N++     
Sbjct: 1328 -FLRRAQRKLLETPWQIIQLSETGEPGMFRLWILVDTQLHQVRLVIPRIFYVNTRK--AR 1384

Query: 1367 KFPG-----RRVNKTLPHGRRSFNLIEVMIDEDQFRKESKKLAALLADPEVE 1413
              PG     ++  K+LP  R  +NL +  + E  F++ S++L   L+ PE+E
Sbjct: 1385 SVPGPNELWKKSFKSLPRSRPVYNLYQYSLPESLFQEHSRELLEDLSKPEIE 1436



 Score =  266 bits (679), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 176/580 (30%), Positives = 290/580 (50%), Gaps = 46/580 (7%)

Query: 1422 AKIGMQRCAASSQWFNERISLARYAH----ILWISDDGVPDLGGTSEEDECFA---DEVH 1474
            A IG     + +  F   +  AR+ H    +LW S    PDLGG+  +D       +E  
Sbjct: 1670 APIG--NVPSDATLFGTDLFYARHLHRNNFVLWCSPTEKPDLGGSENDDNRLLTDFEESS 1727

Query: 1475 QPVLTYPGAYRKVSVELKIHHLSVNALLKSNQVNEMEGGGLF-GFD-------QDMNSGP 1526
                  PG Y  V V+L +  L+VNAL++ + +++++G   F  F        QDM  G 
Sbjct: 1728 SCAANNPGTYSSVCVQLSVDSLAVNALMQYHHIHDIDGTSTFVAFHNQQRPSVQDMAMGG 1787

Query: 1527 YNNELCGFDETTSSAPAFRVVKQLIQRCLTDAVTSGNVFADAILQHLYRWLCSPHSKLHD 1586
                +  +DE T   PAF+ ++ ++   + D     N FAD  L H YRWL S ++ L+D
Sbjct: 1788 DAATIPSYDEITLCNPAFKTLRSMVNTWMLDVGAYKNKFADYQLIHFYRWLRSSNALLYD 1847

Query: 1587 PVLHRILHKVMQKVFAMLLAEFRKLGATIIFANFSKVIIDTGKFDLSAAKAYCDSLLKAL 1646
            P L R LH  M+K++  L+AEF+ LG  I+FANF+K+I+ T K  ++ A  Y   +++ +
Sbjct: 1848 PALRRTLHTYMKKLYIQLIAEFKMLGCIIVFANFNKIIVCTKKRSVNDALGYISFVVETI 1907

Query: 1647 QTRELFEWIELEPVHFWHSLLFMDQYNYGGIPA------RADESLDDDSQVDIVSSWNIA 1700
              +ELF  I++     W  L+++D +N+ GI          DE+ DDD+   I+ +W++ 
Sbjct: 1908 NNKELFHSIDINYDKCWEYLIWLDLHNHAGIKGFTPPNDADDENNDDDNMPQIMMNWSLE 1967

Query: 1701 EYLPKEI--QDHFVLVVSEFMYIPW-----KHAQKLAASRASLQEGSSCTPSITVAAAEN 1753
            E LPKE   Q  F  V++ ++   +       A      R    +  S    + + A EN
Sbjct: 1968 ECLPKEAGCQASFKAVIAGYINAVYHCMIENEANNTIRPRRRQSQSQSFIAPLGLGALEN 2027

Query: 1754 FESHIVQYVKGEISSYFTGKLLSIVRDAIHHMKKMNNDQHNSPGV-MQTAANIHKVDAPL 1812
                  + + GE+S     +L  I +    ++ +        P + M    NI K++  L
Sbjct: 2028 TAEFAKKLISGEMSQ----RLFKITQKIHRNLPEKTLTLEEYPNLDMGGKENI-KINPAL 2082

Query: 1813 EFIKHVCAAFALDQNVQHDVLVMRKNLLKYVRVREFAPEAEFRDPCPSFILPNVICSYCN 1872
            E IK +C   +LD+ V+++V  ++ NLL+ + V  F  + E++DPC S +LP VIC  CN
Sbjct: 2083 ELIKAICKVLSLDKEVENEVYNLKANLLRLIGVGSFGDQVEWKDPCISLVLPEVICKTCN 2142

Query: 1873 DCRDLDLCRDMALLAQD----WHCAMPQCGQPYDREVMENALLQIVRQRERLYHLQDLVC 1928
              RD+DLC+D     ++    W C  P C   YD   +E +L+  + ++   Y LQDL C
Sbjct: 2143 HTRDIDLCKDEHYTNENNRHMWKC--PVCDNSYDNTEIEFSLIDKLNRKSMGYVLQDLQC 2200

Query: 1929 IRCNQVKAAHLAEQCACAGSFRCKEDASDFRSKMQIFLNI 1968
             +C Q+K  ++   C+C+G +    D    R+++ ++ NI
Sbjct: 2201 RKCKQIKRENMNMLCSCSGEY----DNLISRNEITMYANI 2236


>gi|219129675|ref|XP_002185008.1| DNA polymerase epsilon catalytic subunit that participates with PCNA
            in late in S phase DNA replication [Phaeodactylum
            tricornutum CCAP 1055/1]
 gi|217403503|gb|EEC43455.1| DNA polymerase epsilon catalytic subunit that participates with PCNA
            in late in S phase DNA replication [Phaeodactylum
            tricornutum CCAP 1055/1]
          Length = 2155

 Score = 1239 bits (3206), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 663/1370 (48%), Positives = 885/1370 (64%), Gaps = 98/1370 (7%)

Query: 66   IDLYFVSQDGSTFKSKYKFRPYFY------AATKEKMEMDVE---AYLRRRYESQIADIE 116
            +DLYF +  G +FKS   +RPYFY          E + + +E     L R  E+ +    
Sbjct: 3    LDLYFSTDSGHSFKSTILYRPYFYVLPDLTGVGPEHVAIVLELLQTTLTRLGETALHGCH 62

Query: 117  ILEKEDLDLKNHLSGLH-----KSYLKISFDTVQQLMDVKKDLLHVVERNQAKFDAAEAY 171
            I+ K DLD  NHL+  H     +  LK+  D+VQQLM +++ +  VV +NQA+  +A  +
Sbjct: 63   IVTKTDLDQPNHLAPKHQHPNGRKVLKMVCDSVQQLMQLREIVRDVVHQNQARKTSAPTF 122

Query: 172  ESILTGKREQRPQDFLDCIVDLREYDVPYHIRFAIDNDVRCGQWYDVSI-----SSTGPL 226
            +       +   QD L  +VD+REYDVPY +R   D D+R G WYDV +        G +
Sbjct: 123  QP---HNDQAYLQDPLALLVDMREYDVPYVVRTCTDLDIRAGTWYDVHLLDDPEDDFGGV 179

Query: 227  LEKRVDLLQRAEVHVCAFDIETTKLPLKFPDADYDIIMMISYMLD----GQGYLIINREC 282
              +  D   +A     AFDIE TK PLKFP AD D I MISYM+     GQG+L+ +R  
Sbjct: 180  RLRNPDRESKANPTFLAFDIECTKAPLKFPSADVDEIFMISYMVSTPQGGQGFLVTSRSV 239

Query: 283  VGEDIEDLEYTPKPEFEGYFKVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFL 342
            V  D+ D EYTP+P + G F + N  NE  LL  +FA  Q  KP I VTYNGD+FDWPF+
Sbjct: 240  VAADVHDFEYTPQPNYPGPFTIFNEANEQALLERFFAEYQRWKPQIVVTYNGDFFDWPFV 299

Query: 343  ETRAAHHGFKMSEELGFQCDKNQGECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAK 402
            E RA  +G  + ++ G  C + Q E   + + HLD F WV+RDSYLPQG+QGLKAVTK K
Sbjct: 300  EARAKLYGLDLYQQTGV-C-RIQDEYCGRTSVHLDAFHWVQRDSYLPQGAQGLKAVTKYK 357

Query: 403  LGYDPLEVNPEDMVRFAKEKPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDE 462
            LGYDP+EV+PEDM+RFA EKP  MA+YSVSDAVATYYLY  YVH FIFSL+TIIPM P++
Sbjct: 358  LGYDPVEVDPEDMLRFAHEKPVHMATYSVSDAVATYYLYEKYVHLFIFSLSTIIPMGPED 417

Query: 463  VLRKGSGTLCEMLLMVQAYKANVICPNKHQSDPEKFYRNHLLESETYIGGHVECLESGVF 522
            VLRKGSGTLCE LLMVQA + ++ICPNK   +  KF++ HLLESETYIGG VECLE+GV+
Sbjct: 418  VLRKGSGTLCEALLMVQACQKSIICPNKQVDEVAKFHKGHLLESETYIGGKVECLETGVY 477

Query: 523  RSDLPTSFKLDPSAYEQLLNNLDRDLQYAIKVEGKMDLESVSNYDEVKNAIMEKLLRLQE 582
            RSD+   F L PSA++QL++N+DRDL +AI+VEG    + + NY E++  I+ +L +L++
Sbjct: 478  RSDIEYEFDLQPSAFQQLIDNVDRDLTFAIEVEGGQQRDDIVNYGEIRTQIVHELEQLRD 537

Query: 583  EPIREECPLIYHLDVAAMYPNIILTNRLQPPSIVTDEVCTACDFNRPGKTCLRKLEWVWR 642
             P R E P IYHLDV AMYPNIILTNRLQP +IV D  C ACD+N+    C R +EWVWR
Sbjct: 538  RPQRTEKPYIYHLDVGAMYPNIILTNRLQPSAIVDDATCAACDYNQEKNGCKRPMEWVWR 597

Query: 643  GEIFMGKRSDYYHLKKQIESEFVDGTNGHLSKSFLDLPKMEQQSRLKDRLKKYCQKAYKR 702
            G+     R++Y   K Q+  E         + SF  LP  EQ   + +RLK Y +KAYKR
Sbjct: 598  GDHNPATRNEYDRTKDQLARE-----PQRDNLSFAQLPDSEQAILVAERLKTYARKAYKR 652

Query: 703  VLDKPVTE--LREAGICMRENSFYVDTVRSFRDRRYEYKGLNKVWKGKLSEAKASGNSIK 760
                 VTE   R+  +CMREN+FYVDTVR FRDRRYEYK LNK WK ++S AK +     
Sbjct: 653  T---KVTEENTRQDVVCMRENNFYVDTVRQFRDRRYEYKKLNKTWKKRVSSAKDAATK-- 707

Query: 761  IQEAQDMVVLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLI 820
             +E +D V++YDSLQ+AHKCILNSFYGYVMR+GARW SMEMAG+VT TGA II  AR+L+
Sbjct: 708  -KECEDRVLVYDSLQIAHKCILNSFYGYVMRRGARWRSMEMAGIVTKTGADIITQARVLV 766

Query: 821  EKIGKPLELDTDGIWCVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQ 880
            E+IG+PLELDTDGIWC+LP SFP+ +TF+++D    L + YPCVMLN DV    TN QYQ
Sbjct: 767  EQIGRPLELDTDGIWCILPRSFPDVYTFQSRD-GSHLKLEYPCVMLNADVHNKFTNHQYQ 825

Query: 881  TLVDPVSKTYETHSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGF 940
            TLVDPV   YET SECSI FEVDGPY+ M+LPAS EEG L+KKRYAVFN DG+LAELKGF
Sbjct: 826  TLVDPVRGIYETRSECSIFFEVDGPYRCMVLPASTEEGKLLKKRYAVFNFDGSLAELKGF 885

Query: 941  EIKRRGELKLIKVFQAELFDKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELID 1000
            E+KRRGEL+LIK FQ+++F++FL GS++++CY +VA VAN W+D++D +G  + D EL+ 
Sbjct: 886  ELKRRGELELIKTFQSQVFERFLDGSSLKDCYESVAEVANHWIDVIDTRGDSLDDEELVG 945

Query: 1001 YISESSTMSKSLADYGEQKSCAVTTARRLSDFLGDTMVKDKGLRCQYIVACEPQGTPVSE 1060
             ISE+ +MS+ L DYG+QK  + TTARRL +FLG  ++KDKGL C++I+A +P G PV++
Sbjct: 946  LISENRSMSRQLDDYGDQKGTSQTTARRLGEFLGAEIIKDKGLNCKFIIAEQPYGAPVTD 1005

Query: 1061 RAVPVAIFETDAEIMKFYLRKWCKTSSDVG----IRSIVDWSYYKQRLSSAIQKIITIPA 1116
            RA+P AI++ ++ +MK +LRKW K+    G    IR+++DW YY  RL  +IQKIITIPA
Sbjct: 1006 RAIPTAIWKAESSVMKHFLRKWLKSPGLDGDALDIRNVLDWDYYLDRLGKSIQKIITIPA 1065

Query: 1117 AMQKVSNPVPRVVHPDWLYKKVREKEDKFRQRKLVDIFSSLKKDDFLNKTCNAETNLMDE 1176
            A+QK+ NPVPRV HP WL  KV    D+F+Q+ +   FS             A+  L+  
Sbjct: 1066 ALQKIPNPVPRVEHPGWLTSKVNHLNDRFQQQSIQSAFS-----------VQAKNPLVRI 1114

Query: 1177 NVEDLEDFPKKRRNSVNGPRPIVRCFEVNNEQKTVKTTDQVDSLRQQLEPSEVSDQQPSS 1236
            N  D+ED     R S    RP+V      +  KT+ +T +VD+     EP  + ++   S
Sbjct: 1115 NELDIEDSGPSSRES---KRPVVHRMR-RHRVKTLDSTVEVDA-----EPHAIKERVSLS 1165

Query: 1237 QNAIDTENIDRIVDYKGWLELKKRKWKDNLDRRKKQKLGSLRA-SHQANGVSESLGDMIN 1295
            +             +  WL  KK+ W+         KL S R+   +++GV  +      
Sbjct: 1166 KEK-----------FGDWLAQKKKLWR---------KLRSQRSVPAKSDGVDRA------ 1199

Query: 1296 HKEAQRRTGVGSYFRRQETAMTRCHWQIIQLVPSSQSGVFLAWVVV-EGIMVRIPITVPR 1354
             K+A+    + SY R    A+++  WQI+++   S SG  + W +V    + +I +TVPR
Sbjct: 1200 DKKARTAHTIESYVRDAALAISQKEWQIVEMREISGSGELVLWTMVGTDSLQKIVVTVPR 1259

Query: 1355 LFYLNSKDPIV----EKFPGRRVNKTLPHGRRSFNLIEVMIDEDQFRKES 1400
              Y++++   +    +    R+V++ LP GR +  L EV + E  +R +S
Sbjct: 1260 TVYISTRVEAICTSSDIHSFRKVDRHLPRGRCTSYLYEVCMPEYVYRDQS 1309



 Score =  238 bits (608), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 162/580 (27%), Positives = 283/580 (48%), Gaps = 72/580 (12%)

Query: 1455 GVPDLGGT--SEEDECFAD--EVHQPVLTYPGAYRKVSVELKIHHLSVNALLKSNQVNEM 1510
            G PDLG      EDE + D  E+  PV+  PG YR + V++ ++ L++ AL   +     
Sbjct: 1593 GKPDLGANFMVSEDEIWGDDDELVSPVIRRPGCYRSICVDIDVYDLAIAALTDLSSSLAT 1652

Query: 1511 EGGGLFGFDQDMNSGPYNNEL--CGFDETTSSAP---------AFRVVKQLIQRCLTDAV 1559
             G GL    Q   S P N  L    F  +T + P         +  + + L+   L DA+
Sbjct: 1653 GGPGLLA-SQANPSSPNNVALFDSSFGMSTIAGPLGDEMSTVVSLPIARALVCGWLKDAM 1711

Query: 1560 TSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEFRKLGATIIFAN 1619
             + +  AD +L H+YR + SP + LHDP LHR +H +M+  F  +L E ++LG +II+A+
Sbjct: 1712 NAQSDVADELLHHVYRLISSPQALLHDPALHRAVHGLMKTAFFRILGELQRLGCSIIYAS 1771

Query: 1620 FSKVIIDTGKFDLSAAKAYCDSLLKALQTR--------ELFEWIELEPVHFWHSLLFMDQ 1671
            F ++ + T K +L+ A+ Y + ++   + R        +    + L P  F    +F+D+
Sbjct: 1772 FHRITVATNKIELADAEEYINFVIATARKRANENNEQGDSLSRVALRPRQFHTHFVFLDE 1831

Query: 1672 YNYGGIPARADESLDDDSQVD----------------IVSSWNIAEYLPKEI-QDHFVLV 1714
            YN+G +     E LD +S+ D                ++++W++  YL  +I  ++F  +
Sbjct: 1832 YNFGSVQLERVEKLDLESENDFNIPESEHKSTVVVPSVITAWSVMNYLGSQIGHEYFRAI 1891

Query: 1715 VSEFMYIPWKHAQKLAASRASLQEGSSCTPSITVAAAENFESHIV----QYVKGEISSYF 1770
            +  F    +K   +L A              +++    +F+S ++    Q V+   +SY 
Sbjct: 1892 IGRFSKDVFKKQMELVA----------LGDRLSLTGINDFDSQLLDHKRQMVRKHFASYL 1941

Query: 1771 TGKLLSIVRDAIHHMKKMNNDQHNSPGVMQTAANIHKVDAPLEFIKHVCAAFALDQNVQH 1830
            T  +  I++D+         D    P  M T  +   V A LEFIK+V     LD +++ 
Sbjct: 1942 TRAVSEILKDSAE-------DLILPP--MYTGKSSPIVPA-LEFIKNVTVILELDSDIET 1991

Query: 1831 DVLVMRKNLLKYVRVREFAPEAEFRDPCPSFILPNVICSYCNDCRDLDLC----RDM-AL 1885
            +V V++++LL  + V E+A  A + +PCP +ILP+V C+ C + RDL+LC    R++   
Sbjct: 1992 EVHVLKRSLLAQIGVAEYAKAALWENPCPKYILPDVFCTECYESRDLNLCYVPPREIDNK 2051

Query: 1886 LAQDWHCAMPQCGQPYDREVMENALLQIVRQRERLYHLQDLVCIRCNQVKAAHLAEQCAC 1945
            + +DW C    CG  YD  V+E  L+ +V ++   Y LQD+ C + N+V    LA    C
Sbjct: 2052 VEKDWVCE--DCGSSYDVGVIERRLISLVNRKVVRYQLQDVRCTKTNRVATRALAALSDC 2109

Query: 1946 AGSFRCKEDASDFRSKMQIFLNIANRQGFQLLQECTSWIL 1985
            +   +        + ++ +  ++A+  G + L++ T  IL
Sbjct: 2110 SAGLKLDLTPKSAKIEVTLLRSLADYHGLECLRDTTDSIL 2149


>gi|256078981|ref|XP_002575770.1| DNA polymerase epsilon catalytic subunit [Schistosoma mansoni]
          Length = 3291

 Score = 1238 bits (3203), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 682/1480 (46%), Positives = 919/1480 (62%), Gaps = 123/1480 (8%)

Query: 23   AEEELEAKLGYDLFSEGDKRLGWLLTFASSSLEDEDTRKVYSCIDLYFVSQDGSTFKSKY 82
            A E  + + G++ F    +R+GWL+    + L D D++++ S IDLYF+  DG+ FK   
Sbjct: 62   ANEITDRRYGFEAFVGPGERIGWLVNMHPTDLLD-DSKRLVSGIDLYFLQTDGNRFKVSR 120

Query: 83   KFRPYFYAATK--EKMEMDVEAYLRRRYESQIADIEILEKEDLDLKNHLSGLHKSYLKIS 140
             + PYFY   +  +  E D  +YL +R+  ++A IEI+ K DLDL NHL G   +YLK+ 
Sbjct: 121  PYLPYFYVLVRGGQAAERDANSYLLKRFSGRLAGIEIVSKNDLDLPNHLVGAKATYLKML 180

Query: 141  FDTVQQLMDVKKDLLHVVERNQAKFDAAEAYESILTG--------------KREQRPQDF 186
            F +V +L+ V+K+L   +  N+    +  +Y  IL                  +Q   D 
Sbjct: 181  FYSVDELVRVRKELAVRIRANRELASSGSSYTDILAEHFRNDDYGIVTNQLSVKQNRSDP 240

Query: 187  LDCIVDLREYDVPYHIRFAIDNDVRCGQWYDVSISSTG--PLLEKRVDLLQRAEVHVCAF 244
            LD + DLRE DVPY  R  ID ++  G WY V+    G  P  +   D +   E  V AF
Sbjct: 241  LDNLFDLRESDVPYLTRVCIDLNIFAGCWY-VTTCKPGCPPEFKHHEDTVAWPEPVVLAF 299

Query: 245  DIETTKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKV 304
            DIETTK+PLKFPD   D I+MISYMLDG G+LI NRE + EDIED +YTP+PEF G+F V
Sbjct: 300  DIETTKMPLKFPDPTNDQIIMISYMLDGAGHLICNREILSEDIEDFDYTPRPEFPGHFTV 359

Query: 305  TNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQC--- 361
             N+  E++ +  +F H+Q V+P I VTYNGD+FDWPF+E RAA +G  MSEE GF     
Sbjct: 360  HNLKTELDCITFFFEHIQRVRPNILVTYNGDHFDWPFIEVRAASYGLSMSEETGFSRQKG 419

Query: 362  ------DKNQGECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDM 415
                  D + GE  ++ A H+DC  WVKRDSYLP G++GLKAV KAKL YDP+EV+PE M
Sbjct: 420  TVGPGRDGSSGEYLSRPAVHIDCLCWVKRDSYLPVGARGLKAVAKAKLRYDPIEVDPELM 479

Query: 416  VRFAKEKPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEML 475
             R A E P+ +A+YSVSDAVATYYLYM YVHPF+F+L TI+P++PD+VLRKGSGTLCE L
Sbjct: 480  CRMAHESPRELANYSVSDAVATYYLYMKYVHPFVFALCTILPLNPDDVLRKGSGTLCEAL 539

Query: 476  LMVQAYKANVICPNKHQSDPEKFYRN----------------HLLESETYIGGHVECLES 519
            LMVQAY ANVI P+K Q+D E    N                HL++S+TY+GGHVE LE+
Sbjct: 540  LMVQAYAANVIFPHK-QTDGESGPNNLLLSDSGISGKFTEDGHLIDSQTYVGGHVEALEA 598

Query: 520  GVFRSDLPTSFKLDPSAYEQLLNNLDRDLQYAIKVEGKMDLESVSNYDEVKNAIMEKLLR 579
            GVFR+D+P  F+L P+A E L  ++ R +  A++ E   DL   ++  ++   +   L +
Sbjct: 599  GVFRADIPVRFRLVPAALEALRADVKRCISRALQAEIASDLFVFTH--QICGQVENTLQQ 656

Query: 580  LQEEPIREECPLIYHLDVAAMYPNIILTNRLQPPSIVTDEV--CTACDFNRPGKTCLRKL 637
            L   P R ECP+IYHLDV AMYPNIILTNRLQP ++ +     C  C+F +PG +C R +
Sbjct: 657  LASTPNRIECPVIYHLDVGAMYPNIILTNRLQPSAVDSGSAAKCADCEFYKPGISCQRFM 716

Query: 638  EWVWRGEIFMGKRSDYYHLKKQIESE-----FVDGTNGH---LSKSFLDLPKMEQQSRLK 689
             W WR E++   R + Y +  Q+  E       D        + KSF +L + EQ +  K
Sbjct: 717  PWTWRAELWTASRPEVYRIHAQLSQERFPIKLTDANEKFPKTVMKSFHELSREEQAAVEK 776

Query: 690  DRLKKYCQKAYKRV-LDKPVTELREAGICMRENSFYVDTVRSFRDRRYEYKGLNKVWKGK 748
             R+  YC++AYKR+ L +  TE R A +C RENSFYVDTV++FRDRRY++KGL K WK  
Sbjct: 777  KRITDYCRRAYKRIHLTR--TEERIAMVCQRENSFYVDTVKAFRDRRYKFKGLTKTWKRH 834

Query: 749  LSEAKA-----SGNSIKIQEAQDMVVLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAG 803
              +A A     +G+S  ++EA  M+VLYDSLQLAHKCILNSFYGYVMR+GARWYSMEMAG
Sbjct: 835  YDDACAALSAGTGDSNAVKEANAMLVLYDSLQLAHKCILNSFYGYVMRRGARWYSMEMAG 894

Query: 804  VVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLPGSFPENFTFKTKDLK-KKLTISYP 862
            +V +TGA II  +R ++E+IG+ LELDTDGIWC+LP SFP+N  F     K  +++ISYP
Sbjct: 895  IVCHTGANIITKSREIVEQIGRALELDTDGIWCILPASFPQNIEFTAVASKPSRISISYP 954

Query: 863  CVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEFEVDGPYKAMILPASKEEGILIK 922
              +LN+ V    TN QY  LVD  + TY+  SE SI FEVDGPYKAM+LPA+KEEG  +K
Sbjct: 955  GALLNIMVQDFFTNHQYHELVDQETLTYKIRSENSIYFEVDGPYKAMVLPAAKEEGKRLK 1014

Query: 923  KRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFLHGSTIEECYSAVAAVANRW 982
            KRYAVFN DG+LAELKGFEIKR GEL+LIK+FQ+ +F+ FL G ++ E YS+VA+VA+ W
Sbjct: 1015 KRYAVFNFDGSLAELKGFEIKRNGELQLIKIFQSSVFEAFLRGDSLVEAYSSVASVADHW 1074

Query: 983  LDLLDNQGKDIADSELIDYISESSTMSKSLADYGEQKSCAVTTARRLSDFLGDTMVKDKG 1042
            LD+L ++G D+ DSEL D ISE+ +MS+ L DYG QKS +++TARR+++FLGD +VKD G
Sbjct: 1075 LDVLYSKGADMPDSELFDLISENRSMSRKLEDYGSQKSTSLSTARRMAEFLGDQIVKDAG 1134

Query: 1043 LRCQYIVACEPQGTPVSERAVPVAIFETDAEIMKFYLRKWCKTSS---DVGIRSIVDWSY 1099
            L C+YI+A +P G PV+ERA+P+AIF+ +  I + YL+KW K S+      IR I+DWSY
Sbjct: 1135 LSCRYIIARQPDGAPVTERAIPLAIFQAEGSIKRHYLQKWLKDSNLDEHTDIREILDWSY 1194

Query: 1100 YKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLYKKVREKEDKFRQRKLVDIFSSLKK 1159
            Y +RLSSAIQKIITIPAA+Q+VSNPVPRV HPDWL +K+ EK D  +QRKL ++F  + K
Sbjct: 1195 YIERLSSAIQKIITIPAALQQVSNPVPRVSHPDWLLRKLAEKMDTCKQRKLTEVF--VLK 1252

Query: 1160 DDFLNKTCNAETNLMDENVEDLEDFPKKRRNSVNGPRPIV-RCFEVNNEQKTVKTTDQVD 1218
            +   NK     T+L      DLE    +    V    PIV R F V   ++         
Sbjct: 1253 NPVTNKLQEQTTDL-----PDLETLCSRNDEKVKSTTPIVTRHFPV---KRFRSPNGPFK 1304

Query: 1219 SLRQQL-EPSEVSDQQPSSQNAIDTENIDRIVDYKGWLELKKRKWKDNLDRRKKQKLGSL 1277
            S R+QL EP  + D   S +                WL   + KW   L++R  Q     
Sbjct: 1305 SWREQLGEPPNLDDANTSKK-------------LTEWLAFHQAKWHFQLEQR--QYFTKS 1349

Query: 1278 RASHQANGVSESLGDMINHKEAQRRTGVGSYFRRQETAMTRCHWQIIQLVP-SSQSGVFL 1336
              + + NG S+     +    A+R+ G+  Y  +    +    WQ+I++VP   Q G + 
Sbjct: 1350 MGNAKINGDSDHGYSFL--PSAKRQRGLARYLNQTRVNLFTAVWQVIEIVPDPGQIGHYT 1407

Query: 1337 AWVVV---EGIMV----RIPITVPRLFYLNSK-------DPIVEKFPGR--RVNKT---- 1376
             WV++   E  +V     + ITV R FY+N +        P+  K  G     N+T    
Sbjct: 1408 LWVLINSPESGLVPSLNAVDITVSRNFYVNMRTPKPKDSGPLFRKVSGNVSMGNETRSAS 1467

Query: 1377 ---LPHGRRSFNLIEVMIDEDQFRKESKKLAALLADPEVE 1413
               LP     ++L E  + E  + + + ++A  LA P+VE
Sbjct: 1468 GLILPRNHTVYHLYEYNVPESVYTEHASEIATDLARPDVE 1507



 Score =  159 bits (402), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 87/261 (33%), Positives = 142/261 (54%), Gaps = 16/261 (6%)

Query: 1442 LARYAHILWISDDGVPDLGGTSEEDECFADEVHQPV---LTYPGAYRKVSVELKIHHLSV 1498
            L ++ H+LW S  G PDLGG   +D+    E+ +     +  PG Y  V+VEL+  +L+V
Sbjct: 1800 LVKHNHVLWCSSSGRPDLGGKETDDQRLLLEMEESGVVEINRPGLYPYVNVELEFTNLAV 1859

Query: 1499 NALLKSNQVNEMEGGGLFGFD----------QDMNSG-PYNNELCGFDETTSSAPAFRVV 1547
            N L+ +N++ E+EG  L  FD          + +N G      +  +DET + + AFR++
Sbjct: 1860 NTLIIANRIPELEGATLLSFDRLSAADRTLEEQLNQGVNLGTHITSYDETAACSAAFRIL 1919

Query: 1548 KQLIQRCLTDAVTSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAE 1607
            + ++   + D     N  AD  + + Y+WL SP S  +DP L R + K+M+KVF  L+ E
Sbjct: 1920 RNMVLAWVRDVTQYQNPLADEQIIYFYQWLRSPRSLFYDPALRRTVQKLMKKVFLKLVDE 1979

Query: 1608 FRKLGATIIFANFSKVIIDTGKFDLSAAKAYCDSLLKALQTRE--LFEWIELEPVHFWHS 1665
                   +I+ANFS++I+ T + +L  A A  D   + L+TR+  LF  ++L+ V  W  
Sbjct: 1980 ITHFHVDVIYANFSRLIMSTHRIELPEALARVDYFTQLLRTRQGTLFTHLDLQYVTSWRQ 2039

Query: 1666 LLFMDQYNYGGIPARADESLD 1686
            L++MD  NY G+ A  +  +D
Sbjct: 2040 LIWMDSANYAGVKASVENLVD 2060



 Score = 72.0 bits (175), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 46/159 (28%), Positives = 71/159 (44%), Gaps = 38/159 (23%)

Query: 1812 LEFIKHVCAAFALDQNVQHDVLVMRKNLLKYVRVREFAPEAEFRDP-----CP------- 1859
            L+FIK +C   +L+ + +  +  +R +LL+ + V EF+PEA +  P     CP       
Sbjct: 2298 LDFIKSLCEVLSLEPSAKLHIESIRHDLLRLINVGEFSPEAIWISPHMIRDCPLNQDPNK 2357

Query: 1860 -----------SFILPNVICSYCNDCRDLDLCRDMALL---------------AQDWHCA 1893
                          LP V C  CN  RD+D+CRD+ ++               +  W   
Sbjct: 2358 YTFETTAIRSLLIYLPEVACPTCNFTRDIDVCRDIHVVWIMASMDSMHAETRQSGCWAWV 2417

Query: 1894 MPQCGQPYDREVMENALLQIVRQRERLYHLQDLVCIRCN 1932
             P C   Y R+ +E AL+Q + Q    + LQDL C +C 
Sbjct: 2418 CPHCRTVYPRDKLEEALVQQLEQFSLQHCLQDLQCPKCT 2456


>gi|62089390|dbj|BAD93139.1| DNA polymerase epsilon catalytic subunit variant [Homo sapiens]
          Length = 983

 Score = 1237 bits (3201), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 599/969 (61%), Positives = 746/969 (76%), Gaps = 17/969 (1%)

Query: 185  DFLDCIVDLREYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLLE--KRVDLLQRAEVHVC 242
            D LD IVD+REYDVPYHIR +ID  +    WY+V        +E  +R DL++R +  V 
Sbjct: 21   DQLDNIVDMREYDVPYHIRLSIDLKIHVAHWYNVRYRGNAFPVEITRRDDLVERPDPVVL 80

Query: 243  AFDIETTKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYF 302
            AFDIETTKLPLKFPDA+ D IMMISYM+DGQGYLI NRE V EDIED E+TPKPE+EG F
Sbjct: 81   AFDIETTKLPLKFPDAETDQIMMISYMIDGQGYLITNREIVSEDIEDFEFTPKPEYEGPF 140

Query: 303  KVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCD 362
             V N  +E  L++ WF H+QE KP I VTYNGD+FDWPF+E RAA HG  M +E+GFQ D
Sbjct: 141  CVFNEPDEAHLIQRWFEHVQETKPTIMVTYNGDFFDWPFVEARAAVHGLSMQQEIGFQKD 200

Query: 363  KNQGECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEK 422
             +QGE +A    H+DC  WVKRDSYLP GS  LKA  KAKLGYDP+E++PEDM R A E+
Sbjct: 201  -SQGEYKAPQCIHMDCLRWVKRDSYLPVGSHNLKAAAKAKLGYDPVELDPEDMCRMATEQ 259

Query: 423  PQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYK 482
            PQ +A+YSVSDAVATYYLYM YVHPFIF+L TIIPM PDEVLRKGSGTLCE LLMVQA+ 
Sbjct: 260  PQTLATYSVSDAVATYYLYMKYVHPFIFALCTIIPMEPDEVLRKGSGTLCEALLMVQAFH 319

Query: 483  ANVICPNKHQSDPEKFYRN-HLLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQLL 541
            AN+I PNK + +  K   + H+L+SETY+GGHVE LESGVFRSD+P  F+++P+A++ LL
Sbjct: 320  ANIIFPNKQEQEFNKLTDDGHVLDSETYVGGHVEALESGVFRSDIPCRFRMNPAAFDFLL 379

Query: 542  NNLDRDLQYAIKVEGKMDLESVSNYDEVKNAIMEKLLRLQEEPIREECPLIYHLDVAAMY 601
              +++ L++A++ E K+ +E V+N++EV + I  KL  L++ P R ECPLIYHLDV AMY
Sbjct: 380  QRVEKTLRHALEEEEKVPVEQVTNFEEVCDEIKSKLASLKDVPSRIECPLIYHLDVGAMY 439

Query: 602  PNIILTNRLQPPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYYHLKKQIE 661
            PNIILTNRLQP ++V +  C ACDFN+PG  C RK+ W WRGE     RS+Y+ ++ Q+E
Sbjct: 440  PNIILTNRLQPSAMVDEATCAACDFNKPGANCQRKMAWQWRGEFMPASRSEYHRIQHQLE 499

Query: 662  SE-----FVDGTNGHLSKSFLDLPKMEQQSRLKDRLKKYCQKAYKRVLDKPVTELREAGI 716
            SE     F +G     +++F +L + EQ    K RL  YC+KAYK++    V E R   I
Sbjct: 500  SEKFPPLFPEGP----ARAFHELSREEQAKYEKRRLADYCRKAYKKIHITKVEE-RLTTI 554

Query: 717  CMRENSFYVDTVRSFRDRRYEYKGLNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQL 776
            C RENSFYVDTVR+FRDRRYE+KGL+KVWK KLS A   G++ +++  ++M VLYDSLQL
Sbjct: 555  CQRENSFYVDTVRAFRDRRYEFKGLHKVWKKKLSAAVEVGDAAEVKRCKNMEVLYDSLQL 614

Query: 777  AHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWC 836
            AHKCILNSFYGYVMRKGARWYSMEMAG+V +TGA II  AR LIE+IG+PLELDTDGIWC
Sbjct: 615  AHKCILNSFYGYVMRKGARWYSMEMAGIVCFTGANIITQARELIEQIGRPLELDTDGIWC 674

Query: 837  VLPGSFPENFTFKTKDLKK-KLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSE 895
            VLP SFPENF FKT ++KK K+TISYP  MLN+ V    TNDQYQ L +P S TY T SE
Sbjct: 675  VLPNSFPENFVFKTTNVKKPKVTISYPGAMLNIMVKEGFTNDQYQELAEPSSLTYVTRSE 734

Query: 896  CSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQ 955
             SI FEVDGPY AMILPASKEEG  +KKRYAVFN+DG+LAELKGFE+KRRGEL+LIK+FQ
Sbjct: 735  NSIFFEVDGPYLAMILPASKEEGKKLKKRYAVFNEDGSLAELKGFEVKRRGELQLIKIFQ 794

Query: 956  AELFDKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLADY 1015
            + +F+ FL GST+EE Y +VA VA+ WLD+L ++  ++ DSEL + ISE+ +MS+ L DY
Sbjct: 795  SSVFEAFLKGSTLEEVYGSVAKVADYWLDVLYSKAANMPDSELFELISENRSMSRKLEDY 854

Query: 1016 GEQKSCAVTTARRLSDFLGDTMVKDKGLRCQYIVACEPQGTPVSERAVPVAIFETDAEIM 1075
            GEQKS +++TA+RL++FLGD MVKD GL C+YI++ +P+G+PV+ERA+P+AIF+ +  + 
Sbjct: 855  GEQKSTSISTAKRLAEFLGDQMVKDAGLSCRYIISRKPEGSPVTERAIPLAIFQAEPTVR 914

Query: 1076 KFYLRKWCKTSS--DVGIRSIVDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDW 1133
            K +LRKW K+SS  D  IR+I+DW YY +RL SAIQKIITIPAA+Q+V NPVPRV HPDW
Sbjct: 915  KHFLRKWLKSSSLQDFDIRAILDWDYYIERLGSAIQKIITIPAALQQVKNPVPRVKHPDW 974

Query: 1134 LYKKVREKE 1142
            L+KK   +E
Sbjct: 975  LHKKTAGEE 983


>gi|323447586|gb|EGB03502.1| hypothetical protein AURANDRAFT_33973 [Aureococcus anophagefferens]
          Length = 2253

 Score = 1237 bits (3200), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 660/1417 (46%), Positives = 906/1417 (63%), Gaps = 80/1417 (5%)

Query: 42   RLGWLLTFASSSLEDEDTRKVYSCIDLYFVSQDG-STFKSKYKFRPYFYAATKEKMEM-- 98
            RLGWLL    ++ +  D+    + ++L+ +S+D  S F+      PYFY A   K     
Sbjct: 32   RLGWLLNMVPTTFQRGDSE--LAGLELFLLSKDAKSNFRVTIAHAPYFYVAVALKFASFG 89

Query: 99   -DVEAYLRRRYESQIADIEILEKEDLDLKNHLSGLHKSYLKISFDTVQQLMDVKKDLLHV 157
              V + L RR+E +   +E +  EDLD  NH++G  ++YLK+SFD V++LM+VK++L  V
Sbjct: 90   EQVRSSLARRFEVEGCVVEAVTLEDLDAPNHVAGAKRTYLKLSFDNVRELMNVKRELAPV 149

Query: 158  VERNQAKFDA-AEAYESILTGKREQRPQDFLDCIVDLREYDVPYHIRFAIDNDVRCGQWY 216
            V  N+ +F+A A +      G+    P+D LD + ++REYDVPY++R AID ++R G W+
Sbjct: 150  VWANRDRFEAEARSSGGGAAGEARSAPEDVLDMLDEIREYDVPYYMRAAIDLNIRVGAWH 209

Query: 217  DVSISSTGPLLEK----------------RVDLLQRAEVHVCAFDIETTKLPLKFPDADY 260
             VS  +     ++                + D++++    V AFDIE TK PLKFP+AD 
Sbjct: 210  TVSPDAAKGGGDEDAADGADVAGAFQAVWQQDVIEKPAPRVLAFDIECTKAPLKFPNADV 269

Query: 261  DIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNVNNEIELLRLWFAH 320
            D + MISYM+DG GYLII+RE V EDI+D EYTPKP F G F V N  +E+ LL+ +  H
Sbjct: 270  DEVFMISYMVDGVGYLIISREVVSEDIDDFEYTPKPAFPGPFSVFNEPDELALLKKFINH 329

Query: 321  MQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDKN---QGECRAKFAC-HL 376
             +E+KP ++VTYNGD+FDWPFL  R   HG  +  ELG + +KN   QGE R +  C HL
Sbjct: 330  CKEIKPHVFVTYNGDFFDWPFLANRCEKHGISLQNELGIE-NKNHPEQGEWRGRAGCVHL 388

Query: 377  DCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQMMASYSVSDAVA 436
            DCFAWVKRDSYLPQGSQGLKAVTK KLGYDP+EV+PEDMV+FA  +P +MA+YSVSDAVA
Sbjct: 389  DCFAWVKRDSYLPQGSQGLKAVTKYKLGYDPVEVDPEDMVKFAHTQPNVMAAYSVSDAVA 448

Query: 437  TYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVICPNKHQSDPE 496
            TYYLY  YV+ FIFSL T+IP   ++VLRKGSGTLCE LLMV+AY+A+V+CPNK Q++P 
Sbjct: 449  TYYLYEVYVNLFIFSLCTVIPNGAEDVLRKGSGTLCEALLMVEAYRASVVCPNK-QNEPH 507

Query: 497  KFYR-NHLLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQLLNNLDRDLQYAIKVE 555
               +   ++ESETY+GGHVE LESGVFRSD+ T F +DP+A E L+ N+DRDL++  K E
Sbjct: 508  LLRKEGRVVESETYVGGHVESLESGVFRSDIATHFSVDPAALETLIANVDRDLEFHAKTE 567

Query: 556  G-KMDLESVSNYDEVKNAIMEKLLRLQEEPIREECPLIYHLDVAAMYPNIILTNRLQPPS 614
            G     + V+N+D+V+  I+  L  L++ P   ECP IYHLDV+AMYPNIILTNRLQP +
Sbjct: 568  GDGATKDQVANFDDVRAQIVASLQALRDAPETTECPKIYHLDVSAMYPNIILTNRLQPTA 627

Query: 615  IVTDEVCTACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYYHLKKQIESEFVDGTNGHLSK 674
            IV    C  CD+N+    C R ++W+WRGE+     S+   L +Q++ E VDGT   L  
Sbjct: 628  IVDRAACAGCDYNQDRNGCKRPMDWIWRGELNPAAPSEVAQLNRQLQYEVVDGTQHTL-- 685

Query: 675  SFLDLPKMEQQSRLKDRLKKYCQKAYKR---VLDKPVTELREAGICMRENSFYVDTVRSF 731
                L K +Q  RLK RLK Y QK YK+   V ++P T++    +CMRENSFYVDTVR+F
Sbjct: 686  ----LSKKDQAQRLKARLKDYSQKVYKKTREVKEEPRTDV----VCMRENSFYVDTVRAF 737

Query: 732  RDRRYEYKGLNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHKCILNSFYGYVMR 791
            RDRRYEYKGL K WK K  +A+A+ +S   + A+D  +L+DSLQLAHKCILNSFYGYVMR
Sbjct: 738  RDRRYEYKGLTKAWKKKRVKAEAAKDSKARKTAEDKELLFDSLQLAHKCILNSFYGYVMR 797

Query: 792  KGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLPGSFPENFTFK-- 849
            KGARW SM MAG+VT TGA +I  AR L+EK+G+PLELDTDGIWC+LP SFPE++T +  
Sbjct: 798  KGARWRSMPMAGIVTLTGANLITQARELVEKVGRPLELDTDGIWCMLPSSFPEDYTLEIV 857

Query: 850  -TKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEFEVDGPYKA 908
                   KL  SYPC MLN DV  N TN Q QTL    +  ++T SECSI FEVDGPYK 
Sbjct: 858  GADGSTSKLPFSYPCGMLNADVHANYTNHQMQTLNG--AGGFDTTSECSIFFEVDGPYKC 915

Query: 909  MILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFLHGSTI 968
            M++P+S EEG L+KKRYAVFN DGTLAELKGFE+KRRGEL+LIK FQ ELFD FL G T+
Sbjct: 916  MVIPSSTEEGKLLKKRYAVFNPDGTLAELKGFELKRRGELELIKAFQGELFDTFLAGDTL 975

Query: 969  EECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLADYGEQKSCAVTTARR 1028
            E CY+AVA VAN WLD++D +G D+ D EL+D ISE+ ++S+ + +Y  +K  ++TTA+R
Sbjct: 976  ESCYAAVADVANAWLDVMDAKGGDMDDEELLDLISENRSLSREVKEYEGRKMTSLTTAQR 1035

Query: 1029 LSDFLGDTMVKDKGLRCQYIVACEPQGTPVSERAVPVAIFETDAEIMKFYLRKWCK--TS 1086
            ++DFLGD M++  GL+C+ +++  P+GTPV+ERAVP  IF  +  + K YLRKW K   +
Sbjct: 1036 IADFLGDDMIQGSGLQCKLVISERPRGTPVTERAVPTIIFSAEPAVRKHYLRKWLKDPAA 1095

Query: 1087 SDVGIRSIVDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLYKKVREKEDKFR 1146
             ++GI+ ++DW YY++RL + I+KIITIPAA+Q V NPVPRV HP+WL KKV E++D  +
Sbjct: 1096 QNLGIKDVIDWKYYRERLDAVIRKIITIPAALQGVENPVPRVPHPEWLRKKVAERDDGRK 1155

Query: 1147 QRKLVDIFSSLKKDDFLNKTCNAETNLMDENVEDLEDFPKKRRNSVNGPRPIVRCFEVNN 1206
            Q K+ D+F+     +  N        L+     DLED          G    +       
Sbjct: 1156 QTKIDDLFAKAAAKE--NDGTKRRKKLL-----DLEDIAGGAPAGGAGVARRIGTPGAGT 1208

Query: 1207 EQKTVKTTDQVDSLRQQLEPSEVSDQQPSSQNAIDTENIDRIVDYKGWLELKKRKWKDNL 1266
            ++K     +  D+   +   +E+   + + Q  +  + +    D++ WL         + 
Sbjct: 1209 QRKRPLGANAPDAPAPE---AELCAGKDAPQLGLAAKKVPE-ADFRAWLA--------DR 1256

Query: 1267 DRRKKQKLGSLRASHQANGVSESLGDMINHKEAQ-RRTGVGSYFRRQETAMTRCHWQIIQ 1325
             +R +++     AS          G +   K+   +R  V    ++   ++TR  W++++
Sbjct: 1257 KQRWRRRRAKATASTATKAFRSRPGALAAPKKGPGKRLNVSDLVKQSTRSLTRGTWRVLE 1316

Query: 1326 LVPSSQSGVFLAWVVVE-GIMVRIPITVPRLFYLNSKDPIVEK-----FPGRRV-NKTLP 1378
            L  +   G+  A+VV + G + R+ ++V +  Y++S +    K     F GR+  N T+P
Sbjct: 1317 LRDTETPGLLNAFVVTDVGHLQRVAVSVAKTLYVSSSNEACLKIARDTFGGRKAPNLTVP 1376

Query: 1379 HG--RRSFNLIEVMIDEDQFRKESKKLAALLADPEVE 1413
                RR   L+E+             LA  L  P ++
Sbjct: 1377 GDELRRGAQLLELRAAARDVDAHDGALARFLHHPGLD 1413



 Score =  201 bits (511), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 168/682 (24%), Positives = 273/682 (40%), Gaps = 169/682 (24%)

Query: 1408 ADPEVEVLGWQQNAAKIGMQRCAASSQWFNERISLARYA--------------------- 1446
            AD +  +LGWQ +A K  ++  A    W  ER +L  +                      
Sbjct: 1628 ADCDYPLLGWQSHACKALLEGIARVPGWLAERRTLGAFGNVPLGNLGAAPLVTVADAVFG 1687

Query: 1447 -------HILWISDDGVPDLGGTSEEDECFADEVHQ----PVLTYPGAYRKVSVELKIHH 1495
                   H+LW S+   PDLGG    +    D+  +     V+ +PGAYR VSV+L +  
Sbjct: 1688 RELRKHRHVLWASEADAPDLGGPRYGNSSIGDDDDELPIRGVVEHPGAYRTVSVKLDVFG 1747

Query: 1496 LSVNALLKSNQVNEMEGGGLFGFDQDMNSGPYNNELCGFDETTSSAPAFRVVKQLIQRCL 1555
              VNA++ S+ +++       G     +                 A AFRV++  +   +
Sbjct: 1748 SCVNAVMVSDALDDAGDLDDGGGWHATHG--------------ECAHAFRVLRAALAAWI 1793

Query: 1556 TDAVTSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEFRKLGATI 1615
             D     +  ADA+L H+ RWL    S LH P L R++    ++V A+L+AE R+LG  +
Sbjct: 1794 DDVAAKRDPVADALLVHVDRWLHDKRSVLHYPALRRLVGSATRRVHALLVAELRRLGVKV 1853

Query: 1616 IFANFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLFMDQYNYG 1675
            + A+   ++++T + D + A ++ D ++  +  R +F ++ L PV ++ SLL++D +N+G
Sbjct: 1854 VHASEGSIVVNTRETDAAHAASHMDFVISTVAARPVFRFLHLRPVAYFKSLLWLDGHNFG 1913

Query: 1676 GIPARAD---------------------------------ESLDD-------DSQVD--- 1692
             I    D                                 E+LD        DSQV    
Sbjct: 1914 AIEILGDDEEELLTQEKATDEDESQEAVGAAEAPEEPDSQEALDSPEAAGSADSQVQKLL 1973

Query: 1693 ---------IVSSWNIAEYLPKEIQDHFVLVVSEFMYIPWKHAQKLAASRASLQEGSSCT 1743
                      VS W +++ LP   +D F ++V  F++ P                     
Sbjct: 1974 KAPAAVQDRFVSEWALSDGLPDAARDWFAVLVGAFLHKP--------------------- 2012

Query: 1744 PSITVAAAENFESHIVQYVKGEISSYFTGKLLSIVRDAIHHMKKMNNDQHNSPGVMQTAA 1803
                + AA   E    +Y +  + S+ T KLLS+V                        A
Sbjct: 2013 ----LVAATGDEERDAEYARDFVQSFTTSKLLSVV------------------------A 2044

Query: 1804 NIHK----VDAPLEFIKHVCAAFALDQNVQHDVLVMRKNLLKYVRVREFAPEAEFRDPCP 1859
             +HK       PL+F+   C A ALD      V   R+ LL ++ VREFAP A  +    
Sbjct: 2045 ELHKDFLHTSVPLDFVVLCCRALALDDRCDDAVQRARRLLLAHLGVREFAPAAAIKPRPI 2104

Query: 1860 SFILPNVICSYCNDCRDLDL--CRDMALLAQDWH--------------CAMPQCGQPYDR 1903
            +  + NVIC +C+   D+DL  C+   L   D                CA  +CG     
Sbjct: 2105 AVNVANVICPHCDATLDVDLHACKGRDLRNGDARELDDKGDPLPRRVPCA--KCGGALST 2162

Query: 1904 EVMENALLQIVRQRERLYHLQDLVCIRCNQVKAAHLAEQCACAGSFRCKEDASDFRSKMQ 1963
              +E  L+++V      Y +QD+ C +C +V    + + C CAG +    D        +
Sbjct: 2163 AQLELKLIELVNAVSVRYAVQDMRCCKCKRVARTTMRKTCECAGEYVTDIDTDKLNDYFR 2222

Query: 1964 IFLNIANRQGFQLLQECTSWIL 1985
            +    A      +L E T++ L
Sbjct: 2223 VVNACAGHYDMLMLAEITAFFL 2244


>gi|360044000|emb|CCD81546.1| putative dna polymerase epsilon, catalytic subunit [Schistosoma
            mansoni]
          Length = 2064

 Score = 1235 bits (3196), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 682/1480 (46%), Positives = 919/1480 (62%), Gaps = 123/1480 (8%)

Query: 23   AEEELEAKLGYDLFSEGDKRLGWLLTFASSSLEDEDTRKVYSCIDLYFVSQDGSTFKSKY 82
            A E  + + G++ F    +R+GWL+    + L D D++++ S IDLYF+  DG+ FK   
Sbjct: 62   ANEITDRRYGFEAFVGPGERIGWLVNMHPTDLLD-DSKRLVSGIDLYFLQTDGNRFKVSR 120

Query: 83   KFRPYFYAATK--EKMEMDVEAYLRRRYESQIADIEILEKEDLDLKNHLSGLHKSYLKIS 140
             + PYFY   +  +  E D  +YL +R+  ++A IEI+ K DLDL NHL G   +YLK+ 
Sbjct: 121  PYLPYFYVLVRGGQAAERDANSYLLKRFSGRLAGIEIVSKNDLDLPNHLVGAKATYLKML 180

Query: 141  FDTVQQLMDVKKDLLHVVERNQAKFDAAEAYESILTG--------------KREQRPQDF 186
            F +V +L+ V+K+L   +  N+    +  +Y  IL                  +Q   D 
Sbjct: 181  FYSVDELVRVRKELAVRIRANRELASSGSSYTDILAEHFRNDDYGIVTNQLSVKQNRSDP 240

Query: 187  LDCIVDLREYDVPYHIRFAIDNDVRCGQWYDVSISSTG--PLLEKRVDLLQRAEVHVCAF 244
            LD + DLRE DVPY  R  ID ++  G WY V+    G  P  +   D +   E  V AF
Sbjct: 241  LDNLFDLRESDVPYLTRVCIDLNIFAGCWY-VTTCKPGCPPEFKHHEDTVAWPEPVVLAF 299

Query: 245  DIETTKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKV 304
            DIETTK+PLKFPD   D I+MISYMLDG G+LI NRE + EDIED +YTP+PEF G+F V
Sbjct: 300  DIETTKMPLKFPDPTNDQIIMISYMLDGAGHLICNREILSEDIEDFDYTPRPEFPGHFTV 359

Query: 305  TNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQC--- 361
             N+  E++ +  +F H+Q V+P I VTYNGD+FDWPF+E RAA +G  MSEE GF     
Sbjct: 360  HNLKTELDCITFFFEHIQRVRPNILVTYNGDHFDWPFIEVRAASYGLSMSEETGFSRQKG 419

Query: 362  ------DKNQGECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDM 415
                  D + GE  ++ A H+DC  WVKRDSYLP G++GLKAV KAKL YDP+EV+PE M
Sbjct: 420  TVGPGRDGSSGEYLSRPAVHIDCLCWVKRDSYLPVGARGLKAVAKAKLRYDPIEVDPELM 479

Query: 416  VRFAKEKPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEML 475
             R A E P+ +A+YSVSDAVATYYLYM YVHPF+F+L TI+P++PD+VLRKGSGTLCE L
Sbjct: 480  CRMAHESPRELANYSVSDAVATYYLYMKYVHPFVFALCTILPLNPDDVLRKGSGTLCEAL 539

Query: 476  LMVQAYKANVICPNKHQSDPEKFYRN----------------HLLESETYIGGHVECLES 519
            LMVQAY ANVI P+K Q+D E    N                HL++S+TY+GGHVE LE+
Sbjct: 540  LMVQAYAANVIFPHK-QTDGESGPNNLLLSDSGISGKFTEDGHLIDSQTYVGGHVEALEA 598

Query: 520  GVFRSDLPTSFKLDPSAYEQLLNNLDRDLQYAIKVEGKMDLESVSNYDEVKNAIMEKLLR 579
            GVFR+D+P  F+L P+A E L  ++ R +  A++ E   DL   ++  ++   +   L +
Sbjct: 599  GVFRADIPVRFRLVPAALEALRADVKRCISRALQAEIASDLFVFTH--QICGQVENTLQQ 656

Query: 580  LQEEPIREECPLIYHLDVAAMYPNIILTNRLQPPSIVTDEV--CTACDFNRPGKTCLRKL 637
            L   P R ECP+IYHLDV AMYPNIILTNRLQP ++ +     C  C+F +PG +C R +
Sbjct: 657  LASTPNRIECPVIYHLDVGAMYPNIILTNRLQPSAVDSGSAAKCADCEFYKPGISCQRFM 716

Query: 638  EWVWRGEIFMGKRSDYYHLKKQIESE-----FVDGTNGH---LSKSFLDLPKMEQQSRLK 689
             W WR E++   R + Y +  Q+  E       D        + KSF +L + EQ +  K
Sbjct: 717  PWTWRAELWTASRPEVYRIHAQLSQERFPIKLTDANEKFPKTVMKSFHELSREEQAAVEK 776

Query: 690  DRLKKYCQKAYKRV-LDKPVTELREAGICMRENSFYVDTVRSFRDRRYEYKGLNKVWKGK 748
             R+  YC++AYKR+ L +  TE R A +C RENSFYVDTV++FRDRRY++KGL K WK  
Sbjct: 777  KRITDYCRRAYKRIHLTR--TEERIAMVCQRENSFYVDTVKAFRDRRYKFKGLTKTWKRH 834

Query: 749  LSEAKA-----SGNSIKIQEAQDMVVLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAG 803
              +A A     +G+S  ++EA  M+VLYDSLQLAHKCILNSFYGYVMR+GARWYSMEMAG
Sbjct: 835  YDDACAALSAGTGDSNAVKEANAMLVLYDSLQLAHKCILNSFYGYVMRRGARWYSMEMAG 894

Query: 804  VVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLPGSFPENFTFKTKDLK-KKLTISYP 862
            +V +TGA II  +R ++E+IG+ LELDTDGIWC+LP SFP+N  F     K  +++ISYP
Sbjct: 895  IVCHTGANIITKSREIVEQIGRALELDTDGIWCILPASFPQNIEFTAVASKPSRISISYP 954

Query: 863  CVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEFEVDGPYKAMILPASKEEGILIK 922
              +LN+ V    TN QY  LVD  + TY+  SE SI FEVDGPYKAM+LPA+KEEG  +K
Sbjct: 955  GALLNIMVQDFFTNHQYHELVDQETLTYKIRSENSIYFEVDGPYKAMVLPAAKEEGKRLK 1014

Query: 923  KRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFLHGSTIEECYSAVAAVANRW 982
            KRYAVFN DG+LAELKGFEIKR GEL+LIK+FQ+ +F+ FL G ++ E YS+VA+VA+ W
Sbjct: 1015 KRYAVFNFDGSLAELKGFEIKRNGELQLIKIFQSSVFEAFLRGDSLVEAYSSVASVADHW 1074

Query: 983  LDLLDNQGKDIADSELIDYISESSTMSKSLADYGEQKSCAVTTARRLSDFLGDTMVKDKG 1042
            LD+L ++G D+ DSEL D ISE+ +MS+ L DYG QKS +++TARR+++FLGD +VKD G
Sbjct: 1075 LDVLYSKGADMPDSELFDLISENRSMSRKLEDYGSQKSTSLSTARRMAEFLGDQIVKDAG 1134

Query: 1043 LRCQYIVACEPQGTPVSERAVPVAIFETDAEIMKFYLRKWCKTSS---DVGIRSIVDWSY 1099
            L C+YI+A +P G PV+ERA+P+AIF+ +  I + YL+KW K S+      IR I+DWSY
Sbjct: 1135 LSCRYIIARQPDGAPVTERAIPLAIFQAEGSIKRHYLQKWLKDSNLDEHTDIREILDWSY 1194

Query: 1100 YKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLYKKVREKEDKFRQRKLVDIFSSLKK 1159
            Y +RLSSAIQKIITIPAA+Q+VSNPVPRV HPDWL +K+ EK D  +QRKL ++F  + K
Sbjct: 1195 YIERLSSAIQKIITIPAALQQVSNPVPRVSHPDWLLRKLAEKMDTCKQRKLTEVF--VLK 1252

Query: 1160 DDFLNKTCNAETNLMDENVEDLEDFPKKRRNSVNGPRPIV-RCFEVNNEQKTVKTTDQVD 1218
            +   NK     T+L      DLE    +    V    PIV R F V   ++         
Sbjct: 1253 NPVTNKLQEQTTDL-----PDLETLCSRNDEKVKSTTPIVTRHFPV---KRFRSPNGPFK 1304

Query: 1219 SLRQQL-EPSEVSDQQPSSQNAIDTENIDRIVDYKGWLELKKRKWKDNLDRRKKQKLGSL 1277
            S R+QL EP  + D   S +                WL   + KW   L++R  Q     
Sbjct: 1305 SWREQLGEPPNLDDANTSKK-------------LTEWLAFHQAKWHFQLEQR--QYFTKS 1349

Query: 1278 RASHQANGVSESLGDMINHKEAQRRTGVGSYFRRQETAMTRCHWQIIQLVP-SSQSGVFL 1336
              + + NG S+     +    A+R+ G+  Y  +    +    WQ+I++VP   Q G + 
Sbjct: 1350 MGNAKINGDSDHGYSFL--PSAKRQRGLARYLNQTRVNLFTAVWQVIEIVPDPGQIGHYT 1407

Query: 1337 AWVVV---EGIMV----RIPITVPRLFYLNSK-------DPIVEKFPGR--RVNKT---- 1376
             WV++   E  +V     + ITV R FY+N +        P+  K  G     N+T    
Sbjct: 1408 LWVLINSPESGLVPSLNAVDITVSRNFYVNMRTPKPKDSGPLFRKVSGNVSMGNETRSAS 1467

Query: 1377 ---LPHGRRSFNLIEVMIDEDQFRKESKKLAALLADPEVE 1413
               LP     ++L E  + E  + + + ++A  LA P+VE
Sbjct: 1468 GLILPRNHTVYHLYEYNVPESVYTEHASEIATDLARPDVE 1507



 Score =  157 bits (396), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 85/252 (33%), Positives = 138/252 (54%), Gaps = 16/252 (6%)

Query: 1442 LARYAHILWISDDGVPDLGGTSEEDECFADEVHQPV---LTYPGAYRKVSVELKIHHLSV 1498
            L ++ H+LW S  G PDLGG   +D+    E+ +     +  PG Y  V+VEL+  +L+V
Sbjct: 1800 LVKHNHVLWCSSSGRPDLGGKETDDQRLLLEMEESGVVEINRPGLYPYVNVELEFTNLAV 1859

Query: 1499 NALLKSNQVNEMEGGGLFGFD----------QDMNSG-PYNNELCGFDETTSSAPAFRVV 1547
            N L+ +N++ E+EG  L  FD          + +N G      +  +DET + + AFR++
Sbjct: 1860 NTLIIANRIPELEGATLLSFDRLSAADRTLEEQLNQGVNLGTHITSYDETAACSAAFRIL 1919

Query: 1548 KQLIQRCLTDAVTSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAE 1607
            + ++   + D     N  AD  + + Y+WL SP S  +DP L R + K+M+KVF  L+ E
Sbjct: 1920 RNMVLAWVRDVTQYQNPLADEQIIYFYQWLRSPRSLFYDPALRRTVQKLMKKVFLKLVDE 1979

Query: 1608 FRKLGATIIFANFSKVIIDTGKFDLSAAKAYCDSLLKALQTRE--LFEWIELEPVHFWHS 1665
                   +I+ANFS++I+ T + +L  A A  D   + L+TR+  LF  ++L+ V  W  
Sbjct: 1980 ITHFHVDVIYANFSRLIMSTHRIELPEALARVDYFTQLLRTRQGTLFTHLDLQYVTSWRQ 2039

Query: 1666 LLFMDQYNYGGI 1677
            L++MD  NY G+
Sbjct: 2040 LIWMDSANYAGV 2051


>gi|393222996|gb|EJD08480.1| DUF1744-domain-containing protein [Fomitiporia mediterranea MF3/22]
          Length = 2060

 Score = 1235 bits (3195), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 628/1319 (47%), Positives = 856/1319 (64%), Gaps = 108/1319 (8%)

Query: 131  GLHKSYLKISFDTVQQLMDVKKDLLHVVERNQAKFDAAEAYESI---------------- 174
            G  + YL++ F  V  L+ V+++++ +   N AK  A +AY  +                
Sbjct: 2    GHRRLYLQLCFRNVSDLLAVRREIVPLAMENGAKLSAVDAYAEVVNMSESNMQVEVETSW 61

Query: 175  ------LTGK-REQRPQDFLDCIVDLREYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLL 227
                  L G+ +  +  D  D I+D+RE+DVPY++R AIDN++R G WY+VS ++  P  
Sbjct: 62   AAEADALNGQSKSAKDIDPRDAIIDVREFDVPYYLRVAIDNELRVGLWYNVSFTAGQPQF 121

Query: 228  EKRVDLLQRAEVHVCAFDIETTKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDI 287
             + +D ++R +  V A+DIETTK PLKFPD+  D +MMISYM+DGQG+LI NRE V EDI
Sbjct: 122  SQ-MDRVKRPDPVVLAYDIETTKAPLKFPDSATDQVMMISYMIDGQGFLITNREIVSEDI 180

Query: 288  EDLEYTPKPEFEGYFKVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAA 347
            +D EYTPK   EG F + N  +E   +  +F H QEVKP +  T+NGD+FD+PFL  RA 
Sbjct: 181  DDFEYTPKEGLEGPFTIFNEPDEAATITRFFQHFQEVKPTVVATFNGDFFDFPFLCARAM 240

Query: 348  HHGFKMSEELGFQCDKNQGECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDP 407
             HG  M  E+GF  D ++ E +++   H+DCF WVKRDSYLPQGSQGLKAVT AKLGYDP
Sbjct: 241  VHGIDMFLEIGFSKD-SEDEYKSRTCVHMDCFRWVKRDSYLPQGSQGLKAVTTAKLGYDP 299

Query: 408  LEVNPEDMVRFAKEKPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKG 467
            +E++PE M  +A E+PQ +A YSVSDAVATYYLYM YVHPFIFSL  IIP++PDEVLRKG
Sbjct: 300  IELDPELMTPYAMEQPQTLAQYSVSDAVATYYLYMKYVHPFIFSLCNIIPLNPDEVLRKG 359

Query: 468  SGTLCEMLLMVQAYKANVICPNKHQSDPEKFYRNHLLESETYIGGHVECLESGVFRSDLP 527
            +GTLCE LLMV+AY+ ++I PN+H+      +  HLL SETY+GGHVE LE+GVFRSD+P
Sbjct: 360  TGTLCETLLMVEAYRGHIIMPNRHEDPHGNMFEGHLLSSETYVGGHVEALEAGVFRSDIP 419

Query: 528  TSFKLDPSAYEQLLNNLDRDLQYAIKVEGKMDLESVSNYDEVKNAIMEKLLRLQEEPIRE 587
            T+FK+ P A ++L++ LD  L + I  E K  ++ V NY++VK  I   L  ++++P+R 
Sbjct: 420  TNFKIVPEAAQKLIDELDAALTFCIVEESKCSMDDVVNYEQVKGQIQAALELMRDKPLRF 479

Query: 588  ECPLIYHLDVAAMYPNIILTNRLQPPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEIFM 647
            + PLIYHLDVAAMYPNI+L+NRLQP S+V + VC  CD+NRPGKTC R++ W WRGE F 
Sbjct: 480  DKPLIYHLDVAAMYPNIMLSNRLQPDSVVDESVCAVCDYNRPGKTCDRRMTWAWRGEYFP 539

Query: 648  GKRSDYYHLKKQIESE-FVDGTNGHLSKSFLDLPKMEQQSRLKDRLKKYCQKAYKRVLDK 706
             +R +Y  ++  +  E F     G   + F +L   EQ + L  RL  Y +K YK+  + 
Sbjct: 540  AQRDEYNMVRHALNQEQFPAKRPGGPQRRFNELSPAEQSALLHKRLGDYSRKVYKKTKET 599

Query: 707  PVTELREAGICMRENSFYVDTVRSFRDRRYEYKGLNKVWKGKLSEAKASGNSIKIQEAQD 766
             + + RE  IC REN FYVDTVR FRDRRYEYKGL+K WK  L    ++G   +++EA+ 
Sbjct: 600  RIVQ-RETIICQRENPFYVDTVRRFRDRRYEYKGLHKTWKKNLDGLGSNGAVAEVEEAKK 658

Query: 767  MVVLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKP 826
            M+V+YDSLQLAHKCILNSFYGYVMRKGARW+SMEMAG+   TGA IIQ AR L+E+IG+P
Sbjct: 659  MIVIYDSLQLAHKCILNSFYGYVMRKGARWHSMEMAGITCLTGATIIQMARQLVEQIGRP 718

Query: 827  LELDTDGIWCVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPV 886
            LELDTDGIWC+LP  FPENF F+  +  K +  SYPC MLN  V    TN QY  L DP 
Sbjct: 719  LELDTDGIWCMLPEVFPENFKFQLAN-GKTIGFSYPCTMLNHLVHAKFTNHQYHDL-DPE 776

Query: 887  SKTYETHSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRG 946
            +  Y+ HSE SI FE+DGPYKAMILP+SKEE  L+KKRYAVFNDDG+LAELKGFE+KRRG
Sbjct: 777  TSQYKVHSENSIFFELDGPYKAMILPSSKEEDKLLKKRYAVFNDDGSLAELKGFEVKRRG 836

Query: 947  ELKLIKVFQAELFDKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESS 1006
            EL+LIK+FQ+++F+KFL GST +ECY+AVA +A+RWLD+L ++ + ++D EL++ I+E+ 
Sbjct: 837  ELQLIKIFQSQIFEKFLLGSTTQECYAAVAEIADRWLDVLYSRAESLSDEELVELIAENR 896

Query: 1007 TMSKSLADYGEQKSCAVTTARRLSDFLGDTMVKDKGLRCQYIVACEPQGTPVSERAVPVA 1066
            +MS++LA+Y  QKS +++TARRL++FLGD MVKDKGL C+++++ +P G PV+ERAVP+A
Sbjct: 897  SMSRTLAEYAGQKSTSISTARRLAEFLGDQMVKDKGLACKFVISAKPIGAPVTERAVPIA 956

Query: 1067 IFETDAEIMKFYLRKWCKTSS--DVGIRSIVDWSYYKQRLSSAIQKIITIPAAMQKVSNP 1124
            IF  +  + + YLRKW K +S     +R+I+DW YY +RL S IQK+ITIPAAMQKV NP
Sbjct: 957  IFSAEESVKRTYLRKWLKDNSLASFDLRAILDWDYYIERLGSVIQKLITIPAAMQKVPNP 1016

Query: 1125 VPRVVHPDWLYKKVREKEDKFRQRKLVDIFSSLKKDDFLNKTCNAETNLMDENVEDLEDF 1184
            VPR+ HPDWL+++V   +DKF+Q K+          DF  K+   E++   +N+ D ED 
Sbjct: 1017 VPRIRHPDWLHRRVVALDDKFKQHKVT---------DFFKKSLADESHTQPQNLPDFEDL 1067

Query: 1185 PKKRRNSVNGPRPIVRCFEVNNEQKTVKTTDQVDSLRQQLEPSEVSDQQPSSQNAIDTEN 1244
              +     +G RP               ++D++   ++       ++  P S+  +    
Sbjct: 1068 TLE-----DGDRP---------------SSDRIAITKKASRKITENNDLPVSETRLP--- 1104

Query: 1245 IDRIVDYKGWLELKKRKWKDNLDRRKKQKLGSLRASHQANGVSESLGDMINHKEAQRRTG 1304
             +   +Y  WL+  K++W+  L+ R  +                                
Sbjct: 1105 -NPYKNYPKWLKAVKKRWRAQLEARDNEDPS---------------------------MA 1136

Query: 1305 VGSYFRRQETAMTRCHWQIIQLVPSSQSGVFLAWVVVEGIMVRIPITVPRLFYLNSKDPI 1364
            V S FR   + +TR HW I+Q + S   G F  W+ V   ++ + + +PR FYLN K P 
Sbjct: 1137 VPSMFRGVRSVITR-HWDIVQ-IRSISRGRFTMWLCVNAELIPVTLRIPREFYLNFKAP- 1193

Query: 1365 VEKFPGR----------RVNKTLPHGRRSFNLIEVMIDEDQFRKESKKLAALLADPEVE 1413
                PGR          RV +TLP  R  F+L +  + E+ F          + +P V+
Sbjct: 1194 ----PGRDEFEEHYIRDRVIRTLPRDRPCFHLYKYSMSEETFLNGESHFTNEINNPNVD 1248



 Score =  289 bits (739), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 188/622 (30%), Positives = 311/622 (50%), Gaps = 69/622 (11%)

Query: 1412 VEVLGWQQNAAKIGMQRCAASSQWFNERISLARY-----AHI------------------ 1448
            +++  WQ   AK    R  + + W    I+ A Y      HI                  
Sbjct: 1447 LDIFPWQSAIAKKMFLRYFSLAPWLQRTIAQAAYYDIPVGHIEDDQPLFFCDIELARRLS 1506

Query: 1449 -----LWISDDGVPDLGGTSEEDECFADEVHQPVLTYPGAYRKVSVELKIHHLSVNALLK 1503
                 LW S    PDLGG  E D   A+E+  P    PG Y KV + +++ +L+++++L+
Sbjct: 1507 AQDMVLWWSAGEKPDLGGF-ENDMPPAEELTNPEFLSPGLYSKVCLSIQVGNLAIDSVLQ 1565

Query: 1504 SNQVNEMEG-GGLFGFDQ------DMNSGPYNNELCGFDETTSSAPAFRVVKQLIQRCLT 1556
            S  VNE+EG GG   FD       D ++G     +    ++  S   F ++KQ+++  L 
Sbjct: 1566 SALVNELEGSGGTTAFDSTSHTLDDYSTGDAQPNVT-LGDSNLSPQMFAIIKQMVRAWLL 1624

Query: 1557 DAVTSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEFRKLGATII 1616
            D     N      L H +RW+ S  + +++P + R +H +M+K F  LLAEF++LG+ ++
Sbjct: 1625 DKARDSNSPVSVTLDHFWRWVSSSSAMMYEPSVQRFIHGLMRKTFIQLLAEFKRLGSNVV 1684

Query: 1617 FANFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLFMDQYNYGG 1676
            +A+FS++++ T K     A AY   +  A+ + +LF+ I L    F+  LL+MD  NYG 
Sbjct: 1685 YADFSRILLVTSK-PPGTAHAYATYITTAVTSHDLFKHIYLRTERFYDFLLYMDPANYGA 1743

Query: 1677 IPARADESLDDDSQVDIVSSWNIAEYLPKEIQDHFVLVVSEFMYIPWKHAQKLAASRASL 1736
            +      +++   Q+ I S+WNI ++LP  +Q HF  VV  F+        ++A  R  +
Sbjct: 1744 VVCEDPLAIEPPKQIAISSTWNINKFLPPAVQGHFRTVVRYFI-------AQMAKIRREV 1796

Query: 1737 QEGSSCTPSITVAAAENFESHIVQYVKGEI----------SSYFTGKLLSIVRDAIHHMK 1786
            ++ +  TP   +   +N    + Q   G+I          +   T ++L +V       K
Sbjct: 1797 EQNTR-TP---LRVVQNLGPDVTQRDTGKIKEIDESKVFIAQKLTRRMLQVVSVIQDEHK 1852

Query: 1787 KMNNDQHNSPGV---MQTAANIHKVDAPLEFIKHVCAAFALDQNVQHDVLVMRKNLLKYV 1843
            +   D+  SP     +   + +H  +  LEFIK  CA F+L Q+ Q ++ +M++NLL+ V
Sbjct: 1853 RSIMDEGESPEYAFPVLPGSYLHMTEPTLEFIKFSCAVFSLAQDYQIEIGLMKRNLLELV 1912

Query: 1844 RVREFAPEAEFRDPCPSFILPNVICSYCNDCRDLDLCRDMALLAQD-----WHCAMPQCG 1898
             VREF+ +A FR+PC    L  V C YC+  RD D CRD  LL        W+C  P+C 
Sbjct: 1913 GVREFSDQALFRNPCDPLKLSMVTCCYCDHIRDFDFCRDDDLLPTSLEQAKWYC--PECD 1970

Query: 1899 QPYDREVMENALLQIVRQRERLYHLQDLVCIRCNQVKAAHLAEQCACAGSFRCKEDASDF 1958
              YDR  +E AL+Q + + ER +  QDL C RC Q+++ +++  C C+G+++     +D 
Sbjct: 1971 GEYDRTAIEFALIQHLHRLERNFVQQDLRCARCKQIQSDNVSRHCECSGNYQLTTSKADV 2030

Query: 1959 RSKMQIFLNIANRQGFQLLQEC 1980
            R K++  +N+A       L+EC
Sbjct: 2031 RRKLRTIINVAITHNLTRLKEC 2052


>gi|440797074|gb|ELR18169.1| polymerase (DNA directed), epsilon, putative [Acanthamoeba
            castellanii str. Neff]
          Length = 2220

 Score = 1227 bits (3174), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 682/1408 (48%), Positives = 896/1408 (63%), Gaps = 131/1408 (9%)

Query: 54   LEDEDTRKVYSCIDLYFVSQDGSTFKSKYKFRPYFYAATKEKMEMDVEAYLRRRYESQIA 113
            +E+++T      ID YF+  DGSTFK      PYFY   KEK   +VEAYL+R+YE  + 
Sbjct: 1    MEEKETGITKMAIDYYFLQDDGSTFKVTVPHSPYFYLDVKEKFIPEVEAYLKRKYEG-VQ 59

Query: 114  DIEILEKEDLDLKNHLSGLHKSYLKISFDTVQQLMDVKKDLLHVVERNQAKFDAAEAYE- 172
            +I+ ++KEDL++ NHL+GL K YLKISF T++ L+ ++KDL+ +++ N+ K     AY+ 
Sbjct: 60   NIQSVDKEDLEMSNHLNGLRKRYLKISFHTIKDLLGMRKDLVKIIDANRKKKGLGSAYDG 119

Query: 173  -----SILTGKREQRPQDFLDCIVDLREYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLL 227
                 S+    +  +     D I+D+RE DVPY+IR AID+ +R G WYD+     G  L
Sbjct: 120  DLGMRSVYGEAKTSKHGSLKDHIIDIRESDVPYYIRCAIDHGIRVGLWYDIIPVEGGFEL 179

Query: 228  EKRVDLLQRAEVHVCAFDIETTKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDI 287
             K+ D   R E  VCAFDIETTKLPLKFPD ++D +MMISYMLDGQGYLI+NRE + EDI
Sbjct: 180  RKKDDE-HRPEPRVCAFDIETTKLPLKFPDPEFDRVMMISYMLDGQGYLIVNREIITEDI 238

Query: 288  EDLEYTPKPEFEGYFKVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAA 347
            +D EYTPKPE+ G F V N  +E+ LLR +F HM+EVKP IYVT+NGDYFDWPF+E RA 
Sbjct: 239  DDFEYTPKPEYPGPFIVWNEADEVGLLRRFFDHMKEVKPNIYVTFNGDYFDWPFVERRAE 298

Query: 348  HHGFKMSEELGFQCDKNQ----GECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKL 403
             HG  M  E+G  CD+ +     E R++FA H+D F WVKRDSYLPQGSQGLKAVTKAKL
Sbjct: 299  VHGISMFNEIGM-CDRAKEGTAAEYRSRFASHMDAFKWVKRDSYLPQGSQGLKAVTKAKL 357

Query: 404  GYDPLEVNPEDMVRFAKEKPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEV 463
            GYDPLE++PEDM       P+     +VSDAV TYYLYM YV+PFIFSL  I+PM+PD+V
Sbjct: 358  GYDPLELDPEDM------GPEE----TVSDAVCTYYLYMQYVNPFIFSLCNILPMNPDDV 407

Query: 464  LRKGSGTLCEMLLMVQAYKANVICPNKHQSDPEKFYRNHLLESETYIGGHVECLESGVFR 523
            LRKGSGTLCE LLMV+A+  N+I PNK +SDP K Y+ HLLESETYIGGHVECLESGVFR
Sbjct: 408  LRKGSGTLCETLLMVEAFVKNIIYPNKQESDPSKTYKGHLLESETYIGGHVECLESGVFR 467

Query: 524  SDLPTSFKLDPSAYEQLLNNLDRDLQYAIKVEGKMDLESVSNYDEVKNAI---MEKLLRL 580
             DLP   ++      QL+ +LD  L+  ++V G +  E VSN+D V++ I   +  LL L
Sbjct: 468  RDLPVKMRIHKPHVRQLIEDLDAALEMELEVNG-LKKEDVSNFDAVRDDITAQLSSLLSL 526

Query: 581  QEEPIREE-------------------------CPLIYHLDVAAMYPNIILTNRLQPPSI 615
            +E+  R +                          P+I HLDVAAMYPNIILTNRLQP +I
Sbjct: 527  EEDSERTKEKEDLMKKKDTIVDDADDEWLYVKTLPVIMHLDVAAMYPNIILTNRLQPSAI 586

Query: 616  VTDEVCTACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYYHLKKQIESEFVDGTNGHLSKS 675
            ++   C+            RK+ W W+GE     R++Y  +K ++E+E++        + 
Sbjct: 587  LSPSFCSQ-----------RKMNWTWKGEYIPATRTEYELVKSKLETEWI--------QK 627

Query: 676  FLDLPKMEQQSRLKDRLKKYCQKAYKRVLDKPVTELREAGICMRENSFYVDTVRSFRDRR 735
             + LP+ +Q+  ++ RLK+Y Q  YK+   K   E REA +CMREN FYVDTVR+FRDRR
Sbjct: 628  GIRLPEAKQRKEIQKRLKQYSQTVYKKQKVK-EEEEREAIVCMRENPFYVDTVRAFRDRR 686

Query: 736  YEYKGLNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHKCILNSFYGYVMRKGAR 795
            Y YK   KVW+GKL  A+ + +   +  A+  V+LYDSLQLAHKCILNSFYGYVMR+GAR
Sbjct: 687  YTYKNALKVWQGKLKSAENARSEGDVYNAKGRVILYDSLQLAHKCILNSFYGYVMRRGAR 746

Query: 796  WYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLPGSFPENFTFKTKDLKK 855
            WYSMEMAGVVT+TGA+II+ AR  +EK+G+PLELDTDGIWC LP  FP  F FK K   K
Sbjct: 747  WYSMEMAGVVTHTGAQIIRQARQSVEKLGRPLELDTDGIWCALPDQFPMTFDFKIKASGK 806

Query: 856  KLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTY-ETHSECSIEFEVDGPYKAMILPAS 914
                 YPC MLN  VA + TNDQY T  DP +  + E   ECS+ FE DGPYKAMILPAS
Sbjct: 807  SHIFMYPCTMLNKLVADHFTNDQYHT-TDPDNPEHIEIKKECSVLFEGDGPYKAMILPAS 865

Query: 915  KEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFLHGSTIEECYSA 974
            KEEG LIKKRYAVF+    L ELKGFE+KRRGEL++IKVFQAE+F+KFL G T+EECY+A
Sbjct: 866  KEEGKLIKKRYAVFDKHDRLVELKGFEVKRRGELRMIKVFQAEVFEKFLEGKTLEECYAA 925

Query: 975  VAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLADYGEQKSCAVTTARRLSDFLG 1034
            V  VAN ++DLL N+G  + D EL+D ISES  MSK+LA+YG QKS ++TTA+RL +FLG
Sbjct: 926  VGKVANDYMDLLYNKGSKLPDEELLDLISESRNMSKTLAEYGTQKSTSITTAKRLGEFLG 985

Query: 1035 DTMVKDKGLRCQYIVACEPQGTPVSERAVPVAIF--ETDAEIMKFYLRKWCKTS--SDVG 1090
              MV++KG+ C+YIVA +P G  V++RAVPV IF  E   E  +++L+KWC+    ++  
Sbjct: 986  LEMVQEKGITCKYIVAKKPAGAQVTDRAVPVKIFSSEVAPERRQYFLKKWCQDERMTNFA 1045

Query: 1091 IRSIVDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLYKKVREKEDKFRQRKL 1150
            IR I+DW YY +RL   +QKIITIPAA+Q V NPVPRVVHP WL ++++E     +Q ++
Sbjct: 1046 IRDIIDWDYYIERLGGTVQKIITIPAALQNVENPVPRVVHPPWLLQRLKEH----KQTRI 1101

Query: 1151 VDIFSSLKK---DDFLNKTC-NAETNLM--DENVE--DLEDFPKKRRNSVNGPRPIVRCF 1202
               F  +KK   D   +K   + E  LM  D+     D+  FP         P+ IVR  
Sbjct: 1102 NSHFFFVKKIGGDKGKDKVVGDIEDGLMHLDKGAADGDMVKFP---------PKAIVRLH 1152

Query: 1203 ------EVNNEQKTVKTTD--QVDSLRQQLEPSEVSDQQPSSQNAIDTENIDRIVDYKGW 1254
                  +V  +  T    D  Q    R++ +    +D++        T   D+  DY  W
Sbjct: 1153 KRGRNDDVEQDDGTAGMMDSPQRQPERKKTKGKSKADEEEELLAEETTPEPDQEEDYVEW 1212

Query: 1255 LELKKRKWKDNLDRRKKQKLGSLRASHQANGVSESLGDMINHKEAQRRTGVGSYFRRQET 1314
            L  KKR+WK         ++ +LR   +  G    +G  +N         V SY RRQ  
Sbjct: 1213 LRWKKRQWK---------RMRALRKLRRKEGAQPGVG--VN--------SVVSYARRQRA 1253

Query: 1315 AMTRCHWQIIQLVPSSQS-GVFLAWVVVEGIMVRIPITVPRLFYLN-SKDPIVEKFP--G 1370
            A+    W+II++ P + S   F  WV+V   +  + + VPR++Y+N  K P   + P   
Sbjct: 1254 ALLEGVWEIIEIRPLAHSVNHFRTWVLVGDALHSLTLEVPRVYYINYRKAPSPHELPPNA 1313

Query: 1371 RRVNK-TLPHGRRSFNLIEVMIDEDQFR 1397
             +V+K  LP      +L +V   E +++
Sbjct: 1314 TKVDKVVLPRNTEVQHLYQVQATELEYQ 1341



 Score =  302 bits (774), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 199/663 (30%), Positives = 328/663 (49%), Gaps = 99/663 (14%)

Query: 1415 LGWQQNAAKIGMQRCAASSQWFNERISLARYAHI-------------------------- 1448
            L W+  AA +   R   S+QW+  ++ +  YA++                          
Sbjct: 1563 LAWEDYAADVLTSRFGDSAQWWESQVGMCNYANVPIGNMTSDCMVLISDILFARMLKRDN 1622

Query: 1449 --LWISDDGVPDLGGTSEEDECF-----ADEVHQPVLTYPGAYRKVSVELKIHHLSVNAL 1501
              LW ++   PD  G   +D  F      DE+  P +  P  Y  +  EL IH L++N +
Sbjct: 1623 QVLWAAERERPDFAGKEGDDNFFDSMATTDEMLYPEVVTPDCYSCICAELNIHLLAMNTV 1682

Query: 1502 LKSNQVNEMEGGG--------LFGFDQDMNSGPYNNELCGF-----------DETTSSAP 1542
            L+SN+++E+EG            G D  +      ++  GF           DE +    
Sbjct: 1683 LESNRIHEIEGTAADNVVTFSFTGSDPSLGLCCIYSDWLGFQLLALHQVLRVDEASGCGK 1742

Query: 1543 AFRVVKQLIQRCLTDAVTSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFA 1602
            AF ++K ++ R  +D    GN +AD ++ H YRWL +  S L+DP +HR +  +M+KVF 
Sbjct: 1743 AFSMLKAMLGRWDSDC-NQGNNYADVLVTHFYRWLSNTRSLLYDPAIHRYVQLLMRKVFL 1801

Query: 1603 MLLAEFRKLGATIIFANFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHF 1662
             L+A+F+ LG  I++A F+K+II T K +L +A+ Y + +L   +   +F+ + LEP  +
Sbjct: 1802 HLIAQFKHLGGKIVYATFNKLIISTNKPELESAEQYMNYILGETRKNPMFKSLVLEPRQY 1861

Query: 1663 WHSLLFMDQYNYGGIPARADESL------------------------DDDSQVDIVSSWN 1698
            W +LLF D+ N+GGIPA   E++                        D +S   I+S WN
Sbjct: 1862 WATLLFKDRANHGGIPAIDKENVAVVMGEENGPQSQSEPQSQSQSKGDGES---IISHWN 1918

Query: 1699 IAEYLPKEIQDHFVLVVSEFMYIPWKHA---QKLAASRASLQEGSSCTPSI-------TV 1748
            +AE+LP ++QDHF++ +S F+    K+     KL   R +L + S  +           V
Sbjct: 1919 MAEFLPTKLQDHFIIAISSFILSVHKNRLLHYKLQKDRKTLGDASETSTGKRANVLDQRV 1978

Query: 1749 AAAENFESHIVQYVKGEISSYFTGKLLSIVRDAIHHMKKMNNDQHNSPGVMQTAANIHKV 1808
             + E+ E+  V+ +K  I   F  KL ++V+D      +++ DQ    G  Q+ A    +
Sbjct: 1979 YSEEDEEASEVKELKEIIPLRFMQKLFTLVQDIQKITIEISEDQKRRRGRYQSFAISKAI 2038

Query: 1809 D--APLEFIKHVCAAFALDQNVQHDVLVMRKNLLKYVRVREFAPEAEFRDPCPSFILPNV 1866
            D    LEF+K V  A ++D+ ++     +RK+LLK + V  F+ EA++++PC SF LP V
Sbjct: 2039 DKNPTLEFVKFVSHAMSIDKTLRPQTDKLRKSLLKLINVMPFSQEAQYQEPCQSFRLP-V 2097

Query: 1867 ICSYCNDCRDLDLCRDMALLAQD--WHCAMPQCGQPYDREVMENALLQIVRQRERLYHLQ 1924
            IC++C+  RD+DL RD+ LL  D  W C    C    D++ +E  L+ I ++    Y  Q
Sbjct: 2098 ICTFCSATRDVDLLRDVDLLQGDEGWRCMY--CKHGIDKQEVEMRLVSIFQKHCLAYQFQ 2155

Query: 1925 DLVCIRCNQVKAAHLAEQC-ACAGS-FRCKEDASDFRSKMQIFLNIANRQGFQLLQECTS 1982
            D+ C +C+ VKA  +  +C  C+ S F  +   + FR +M+ FL++A    F  L+    
Sbjct: 2156 DVTCKKCSTVKADFMGVRCKKCSTSEFVPRIPPAQFRKRMREFLDVAEVHQFDYLRSAAE 2215

Query: 1983 WIL 1985
             +L
Sbjct: 2216 DVL 2218


>gi|341903743|gb|EGT59678.1| hypothetical protein CAEBREN_25675 [Caenorhabditis brenneri]
          Length = 1880

 Score = 1225 bits (3169), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 657/1421 (46%), Positives = 889/1421 (62%), Gaps = 93/1421 (6%)

Query: 10   DGRRTKKQKLIRSAEEELEAKLGYDLFSEGDKRLGWLLTFASSSLEDEDTRKVYSCIDLY 69
            D    ++  LIRS  +E++AKLG+  ++   ++ G+L+    S L DE T+ + S +D +
Sbjct: 15   DANYKERLALIRS-NDEIDAKLGFVRYTGIQEKKGFLINIQPSELVDEQTKVIVSVVDYF 73

Query: 70   FVSQDGSTFKSKYKFRPYFYAATKEKMEMDVEAYLRRRYESQIADIEILEKEDLDLKNHL 129
            F+S     FK  Y FRPYFY AT +  E  V +YL ++Y +Q   +E +EKEDLDLK+HL
Sbjct: 74   FISDMDERFKISYPFRPYFYIATIDGFEFQVSSYLSKKYGAQ-THVEHIEKEDLDLKDHL 132

Query: 130  SGLHKSYLKISFDTVQQLMDVKKDLLHVVERNQAKFDAAEAYESILT----GK------R 179
            SGL K+Y+K+SF +  +L  V+KDL+ ++ +N  +     AY   L     GK       
Sbjct: 133  SGLQKTYIKLSFTSTVELQKVRKDLMPLIRKNTDRIKKESAYADYLARNLGGKGAASSGA 192

Query: 180  EQRPQDFLDCIVDLREYDVPYHIRFAIDNDVRCGQWYDVSISSTG--PLLEKRVDLLQRA 237
            E    D L+ IVD+REYDVP+H+R +ID  +  G WYDV        P ++K+      A
Sbjct: 193  EVLDGDILNQIVDIREYDVPFHMRVSIDEKIFVGLWYDVKGVGPNRVPTIKKKDLAFFHA 252

Query: 238  EVHVCAFDIETTKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPE 297
            +  V AFDIETTKLPLKFPD + D IMMISYM+DG+G+LIINRE V  DI   EYTPKPE
Sbjct: 253  KPKVLAFDIETTKLPLKFPDRESDEIMMISYMVDGRGFLIINREIVSADINAFEYTPKPE 312

Query: 298  FEGYFKVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEEL 357
            ++G F V N  +E  L+R +F H  +V+P I VTYNGD+FDWPF+E RA   GF M  E+
Sbjct: 313  YKGEFTVWNEKDETALIRKFFDHFLQVRPNIVVTYNGDFFDWPFVEARAKIRGFNMEREI 372

Query: 358  GFQCDKNQGECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVR 417
            GF  D +  E +++   H+D F WVKRDSYLP GSQ LKAVTKAKL YDP+EV PE M +
Sbjct: 373  GFSKD-SADEYKSRNCIHMDAFRWVKRDSYLPVGSQNLKAVTKAKLRYDPVEVEPELMCK 431

Query: 418  FAKEKPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLM 477
             A+E+PQ +A+YSVSDAV+TYYLYM YVHPF+F+L TIIP+  D+VLRKGSGTLCE LLM
Sbjct: 432  MAREQPQQLANYSVSDAVSTYYLYMKYVHPFVFALCTIIPLGADDVLRKGSGTLCEALLM 491

Query: 478  VQAYKANVICPNKHQSDPE-KFYRN-HLLESETYIGGHVECLESGVFRSDLPTSFKLDPS 535
            V+A+  N++ PNK+    E KF ++ H +ESETY+GGHVE LE+GVFR+D+P  F+L   
Sbjct: 492  VEAFHCNIVFPNKYTGPEETKFSKDGHRVESETYVGGHVEALEAGVFRADIPARFRLQLD 551

Query: 536  AYEQLLNNLDRDLQYAIKVEGKMDLESVSNYDEVKNAIMEKLLRLQEEPIREECPLIYHL 595
            A +QL + +   L+  +  E ++ L+ V ++DE    + +    L   P R E P IYHL
Sbjct: 552  ALQQLKSEVQETLKKELAREFEVSLDQVVDFDEQCAEVEQAFDGLIAAPTRLENPRIYHL 611

Query: 596  DVAAMYPNIILTNRLQPPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYYH 655
            DV AMYPNIILTNRLQP ++V +E+C  C +N+P   C R + W WRGE+    R +Y  
Sbjct: 612  DVGAMYPNIILTNRLQPCAMVNEEICMGCSYNKPDAECKRTMAWEWRGELIPASRGEYQQ 671

Query: 656  LKKQIESEFVDGTNGHLSKSFLDLPKMEQQSRLKDRLKKYCQKAYKRV-LDKPVTELREA 714
            + +Q+E+E    + G   K F  L + E+++    R+K YC++ Y +  L K   E+RE 
Sbjct: 672  IMQQLEAE----SFGKPPKHFHMLERSEREAIEMKRVKDYCRRVYGKTHLTK--LEMRET 725

Query: 715  GICMRENSFYVDTVRSFRDRRYEYKGLNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSL 774
             IC REN FYV+TV++FRDRRYEYK + K  KG+  +A    +   +  ++  +VL++SL
Sbjct: 726  TICQRENHFYVETVKAFRDRRYEYKDMLKKAKGRFDKAVVENDLSTVATSKLEMVLFESL 785

Query: 775  QLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGI 834
            QLAHKCILNSFYGYVMRKG+RW+SMEMAG+V +TGA II+ AR L++KIGKPLELDTDGI
Sbjct: 786  QLAHKCILNSFYGYVMRKGSRWFSMEMAGIVCHTGANIIREARKLVDKIGKPLELDTDGI 845

Query: 835  WCVLPGSFPENFTFKTKDLKKK-LTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETH 893
            WC++P SFPEN TFK K+ K+  +T+SYP  MLN  V    TN QY TL      +Y   
Sbjct: 846  WCLIPASFPENVTFKLKNHKRSSVTVSYPGAMLNALVYEGFTNHQYHTLEK--DGSYSKS 903

Query: 894  SECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKV 953
            SE SI FEVDGPY+ MILPASKEEG  +KKRYAVFN DG+LAE+KGFE+KRRGEL +IK 
Sbjct: 904  SENSIYFEVDGPYQCMILPASKEEGKKLKKRYAVFNLDGSLAEMKGFELKRRGELNIIKH 963

Query: 954  FQAELFDKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLA 1013
            FQ  +F  FL+G T++E Y AVA  AN WLD+L + G D+ D EL D ISE+ +MS+ L 
Sbjct: 964  FQGSVFKTFLNGKTLDEVYKAVAGDANHWLDILHSHGSDLTDEELFDLISENRSMSRKLE 1023

Query: 1014 DYGEQKSCAVTTARRLSDFLGDTMVKDKGLRCQYIVACEPQGTPVSERAVPVAIFETDAE 1073
            +YG QKS +++TA+RL++FLGD MVKD GL C ++++  P G PV+ERA+PVAIF+ D++
Sbjct: 1024 EYGAQKSTSISTAKRLAEFLGDDMVKDAGLACMFVISKHPIGAPVTERAIPVAIFKADSK 1083

Query: 1074 IMKFYLRKWCKTS---SDVGIRSIVDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVH 1130
            +   Y+RKW K +    D  IR ++DW YY +R  S IQKIITIPAA+Q +SNPVPRV H
Sbjct: 1084 VRSHYVRKWTKQTDFDEDTDIRDMLDWDYYIERFGSCIQKIITIPAALQGISNPVPRVAH 1143

Query: 1131 PDWLYKKVREKEDKFRQRKLVDIFSSLKK--------DDFLNKTCNAETNLMDENVEDLE 1182
            PDWL  K+R K +  +Q  +  IF+  +K           L      E    D +VE LE
Sbjct: 1144 PDWLQNKIRNKFEAHKQPLINQIFAKCQKPAAPANMNGKRLRSPLEGEDGDSD-DVEVLE 1202

Query: 1183 DFPKKRRNSVNGPRPIVRCFEVNNEQKTVKTTDQVDSLRQQLEPSEVSDQQPSSQNAIDT 1242
            D  + + N  +  RP           K+ KTT       Q  EP  V +++  + +  D+
Sbjct: 1203 DDGEDKENGSHAKRP-----------KSGKTTQS-----QTPEPP-VLEKKTLADHGFDS 1245

Query: 1243 ENIDRIVDYKGWLELKKRKWKDNLDRRKKQKLGSLRASHQANGVSESLGDMINHKEAQRR 1302
                       WL   K+KWK     RK QKL    AS  ++ VS               
Sbjct: 1246 -----------WLGFLKQKWKIQRKERKAQKL----ASRDSDAVS--------------- 1275

Query: 1303 TGVGSYFRRQETAMTRCHWQIIQLVPSSQSGVFLAWVVVEGIMVRIPITVPRLFYLNSKD 1362
                +  R    A +   W I+ + P++ +  +  W+  +G M ++ + + R   ++S+ 
Sbjct: 1276 ----AIVRGAREAESEREWHILSIEPTADASFYNIWISTQGQMHKVTMKIGRKILVDSRA 1331

Query: 1363 PIVEKFPGRRVNKTLPHGRRSFNLIEVMIDEDQFRKESKKL 1403
            P  ++   RR+   LPH +    L E   DE Q      KL
Sbjct: 1332 PRGDRDTVRRI---LPHHKPPGFLYEFKTDEAQLTALMDKL 1369



 Score =  114 bits (284), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 73/249 (29%), Positives = 129/249 (51%), Gaps = 14/249 (5%)

Query: 1442 LARYAHILWISDDGVPDLGGTSEEDECFADE-----VHQPVLTYPGAYRKVS-VELKIHH 1495
            L +  H LW +    PDLGG   +D   + +     V   VL    A+   + VEL++  
Sbjct: 1626 LQKSGHALWATKSSRPDLGGKELDDIRLSIDWNPLSVDDTVLLNREAFCDTACVELQLSA 1685

Query: 1496 LSVNALLKSNQVNEMEGGG-LFGFD------QDMNSGPYNNELCGFDETTSSAPAFRVVK 1548
            ++V AL++ ++V E EG   +  FD      Q   +G   +  C +DE  +   + +++K
Sbjct: 1686 VAVTALVQRSRVLEAEGADDVVTFDSMSTIAQQSITGAGQSIAC-YDEGAAVDASIKILK 1744

Query: 1549 QLIQRCLTDAVTSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEF 1608
            Q++  C+      GN  AD ++  + RWL +  + L D  L R +  +  K+  +L AE 
Sbjct: 1745 QMLTECVRHIAHQGNRHADEVVMTVSRWLNTRSALLFDSALTRSISVLESKLVLLLCAEC 1804

Query: 1609 RKLGATIIFANFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLF 1668
             ++GA +I A   K++++TGK     AK + + L+++L T  +F  + + PV F+ S+L+
Sbjct: 1805 ERIGAKVIHATAQKLVLNTGKMTSEEAKGFVEMLIQSLSTNVVFAALHITPVKFFDSMLW 1864

Query: 1669 MDQYNYGGI 1677
            MD +N+ GI
Sbjct: 1865 MDAHNHTGI 1873


>gi|328872066|gb|EGG20436.1| putative DNA polymerase epsilon subunit A [Dictyostelium
            fasciculatum]
          Length = 2328

 Score = 1223 bits (3165), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 641/1433 (44%), Positives = 889/1433 (62%), Gaps = 106/1433 (7%)

Query: 42   RLGWLLTFASSSLEDEDTRKVYSCIDLYFVSQDGSTFKSKYKFRPYFYAATKEKMEMDVE 101
            R GWL+    SS  D++T    + ++L F+  D + F+    + PYFY   KE  + +VE
Sbjct: 78   RHGWLININPSSTRDKETGVDKASLELVFIQDDATAFREWIIYNPYFYIFVKEGHQSEVE 137

Query: 102  AYLRRRYESQIADIEILEKEDLDLKNHLSGLHKSYLKISFDTVQQLMDVKKDLLHVVERN 161
            +YL+R+YE++IA IE  EKEDLDL+NHLSG+ K YLKI F  VQ LM+++ +L+ ++++N
Sbjct: 138  SYLKRKYENKIAGIEACEKEDLDLENHLSGIKKVYLKIRFFNVQTLMEIRNELIPIIKKN 197

Query: 162  QAKFDAAEAYESILTG----------------KREQRPQDFLDCIVDLREYDVPYHIRFA 205
            + +    EAYE   +                 K+  + +   + I+D+RE DV Y+ R A
Sbjct: 198  KIRVSTTEAYEDPYSKYNSISSMSGTSSHNSKKQHHQLKSATEYIMDMRESDVTYYQRGA 257

Query: 206  IDNDVRCGQWYDVS-----ISSTGPLLEKRVDLLQRAEVHVCAFDIETTKLPLKFPDADY 260
            ID ++R G WY+++     + +T  +L +RVD   R +  V AFDIETT LPLKF +A+Y
Sbjct: 258  IDLEIRVGLWYEITKESPTMPTTVRVLHERVD---RPDPRVLAFDIETTHLPLKFSNAEY 314

Query: 261  DIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNVNNEIELLRLWFAH 320
            D IMMISYM+D QG+LI NR  V  D+ D EYTPKPE+EG F+V N  NE +LL  +F+H
Sbjct: 315  DEIMMISYMVDRQGFLITNRSIVSADVGDFEYTPKPEYEGPFQVFNEPNERDLLVKFFSH 374

Query: 321  MQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDKNQGECRAKFACHLDCFA 380
            +++++P I+VTYNGD FDWPF+E RA  HG  M  E+G +    Q E R + A H+D F 
Sbjct: 375  VRQIRPHIFVTYNGDSFDWPFIEARALVHGLDMFREIGVR--NKQDEYRGRTAVHMDAFY 432

Query: 381  WVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQMMASYSVSDAVATYYL 440
            WVKRDSYLP GS  LK V + KL Y+P+E++ E+M+  A++ P+ +A+YSVSD V TYYL
Sbjct: 433  WVKRDSYLPHGSHRLKEVIRKKLRYNPVEIDAEEMITAARDDPETLANYSVSDTVGTYYL 492

Query: 441  YMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVICPNKHQSDPEKFYR 500
            YMTYVHPFIFSL  IIP +P++VLRKGSG+LCE LLM +A++ NVI PNKH  D  KFY+
Sbjct: 493  YMTYVHPFIFSLCNIIPYNPEDVLRKGSGSLCEALLMTEAFRVNVIYPNKHIEDNRKFYK 552

Query: 501  NHLLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQLLNNLDRDLQYAIKVEGKMDL 560
             HLLE+ETY+GGHVECLE G+FR D+PT F LD +A  + + N+DR L  A+K     D 
Sbjct: 553  GHLLETETYVGGHVECLECGIFRYDVPTQFNLDVNALNEHIKNIDRILNQAMKEAELTDK 612

Query: 561  ESVSNYDEVKNAIMEKLLRLQEEPIREECPLIYHLDVAAMYPNIILTNRLQPPSIVTDEV 620
              + NY+ ++  I+++L  L+ EP     PLIYHLDV+AMYPNIILTNRLQP S+V++E 
Sbjct: 613  NDIVNYESIRQDILDRLTHLRNEPNSMSNPLIYHLDVSAMYPNIILTNRLQPTSMVSEEY 672

Query: 621  CTACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYYHLKKQIESEFVDGTNGHLSKSFLDLP 680
            C  C +N+P   C R L W WRG+      S+Y  + +Q+E E     NG   KSF DLP
Sbjct: 673  CATCVYNKPESNCQRTLNWQWRGDYIPATSSEYKLILQQLEYE-NHVFNGE-QKSFNDLP 730

Query: 681  KMEQQSRLKDRLKKYCQKAYKRVLDKPVTELREAGICMRENSFYVDTVRSFRDRRYEYKG 740
              EQ   LK RLK+Y +K YK+      +E+R   +CMRENSFYVDTV+ FRDRRYEYK 
Sbjct: 731  NEEQNILLKKRLKEYSRKVYKKN-HIVSSEIRSDTVCMRENSFYVDTVKLFRDRRYEYKA 789

Query: 741  LNKVWKGKLSEA-KASGNSIKIQEAQDMVVLYDSLQLAHKCILNSFYGYVMRKGARWYSM 799
            L+  WK  L ++ K +  S   Q+   MVV+Y+S+QLAHKCILNSFYGYVMRKG+RWYSM
Sbjct: 790  LHSEWKNNLDQSQKGASGSHDYQKCVGMVVMYESMQLAHKCILNSFYGYVMRKGSRWYSM 849

Query: 800  EMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLPGSFPENFTFKTKDLKKKLTI 859
            EMAG+VT+TG+ II+NAR  +E++G+PLELDTDGIWC+LP  FPE F        K    
Sbjct: 850  EMAGIVTHTGSNIIKNARESVEQLGRPLELDTDGIWCILPERFPEEFA-FKTKGGKTKKF 908

Query: 860  SYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEFEVDGPYKAMILPASKEEGI 919
            ++  V+LN  VA + TN QYQ   DP++KTY   +ECSI+FE DGPY  M +P  KE+ +
Sbjct: 909  NFLNVLLNDKVAESFTNHQYQEY-DPITKTYTIRNECSIQFESDGPYGCMFIPTGKEKDV 967

Query: 920  LIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFLHGSTIEECYSAVAAVA 979
             +KKRY VFN  G + ELKGFE+KRRGEL+LIK FQ ELF  F+ G ++E CY+A+A  A
Sbjct: 968  KLKKRYVVFNKQGGICELKGFEVKRRGELELIKSFQTELFQYFMKGDSLESCYNAIATTA 1027

Query: 980  NRWLDLLDNQGKDIADSELIDYISESSTMSKSLADYGEQKSCAVTTARRLSDFLGDTMVK 1039
            NRWLDLLD+      + ELI  I+ESS MS+ L +Y  QKS A+ TAR++ +FLGD +VK
Sbjct: 1028 NRWLDLLDSHADGYEEDELIRLITESSKMSRKLTEYEGQKSSAIGTARKMCEFLGDEIVK 1087

Query: 1040 DKGLRCQYIVACEPQGTPVSERAVPVAIFETDAEIMKFYLRKWCKTSSDVGIRSIVDWSY 1099
            D GL   YI++C+P G PV+ER +PV IF+TD +   F+L+KW    S   ++ I+DW Y
Sbjct: 1088 DAGLFTSYIISCKPHGAPVTERTIPVEIFKTDEDKRAFFLKKWTNGYSQ--LKDIIDWDY 1145

Query: 1100 YKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLYKKVREKEDKFRQRKLVDIFSSLKK 1159
            Y+QRLS  IQK+ITIPAA+Q VSNPVPRV+HPDW+ K+++++ +  +Q  +   FS+   
Sbjct: 1146 YRQRLSGVIQKMITIPAALQNVSNPVPRVIHPDWILKELKKQTELRKQTSITSFFSA--- 1202

Query: 1160 DDFLNKTCNAETNLMDENVEDLEDFPKKRRNSVNGPRPIVRCFEVNNEQKTVKTTDQVDS 1219
                 K   A+T      V D+E    KR   +  P+P+   F  + ++  ++  D  D 
Sbjct: 1203 ----QKPGEADTGAAAGEV-DMESMFDKRFAHL--PKPV---FTKHKKRAKIQVIDSDDE 1252

Query: 1220 LRQ---------------------QLEPSEV------------SDQQPSSQNAIDTENID 1246
              Q                     QL+  +              D    + +A     I 
Sbjct: 1253 DHQPKDKDDDDNDDDDDDEEDEQVQLKSKKKIKQQSITDFFKKGDSTVDATSAAARPTIS 1312

Query: 1247 RIV----DYKGWLELKKRKWKDNLDRRKKQKLGSLRASHQANGVSESLGDMINHKEAQRR 1302
            +      ++ GWL  KK++W+   +R K +KLG                      E  R 
Sbjct: 1313 KAPKMEDNFSGWLSCKKKEWRKLRERIKAKKLGRFTG------------------EENRV 1354

Query: 1303 TGVGSYFRRQETAMTRCHWQIIQLVPSSQSGVFLAWVVVEGIMVRIPITVPRLFYLN--S 1360
              +   F  Q  A+ +  WQ+I + PS   GVF+ W ++  ++V I + V R+FY+N  S
Sbjct: 1355 GHLAQQFSTQNEAVKKGLWQVISIEPSGAVGVFIFWSLIGDMIVPIKVQVNRVFYINSFS 1414

Query: 1361 KDPIVEKFPGRRVNKTLPHGRRSFNLIEVMIDEDQFRKESKKLAALLADPEVE 1413
            ++P +E    ++V    P  +    L    + E+ +  +S+ ++ +  DP+ E
Sbjct: 1415 EEPPLEG--AKKVLVAPPRSKERLYLTRNSMSEEDYITQSRSISNIFTDPDTE 1465



 Score =  188 bits (478), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 110/332 (33%), Positives = 176/332 (53%), Gaps = 64/332 (19%)

Query: 1442 LARYAHILWISDDGVPDLGGTSEEDECFADEVHQPVLTYPGAYRKVSVELKIHHLSVNAL 1501
            L   +H+LW+S    PDLGGT E+D  F +E+ +  +  P +Y  V  EL + +L+VN +
Sbjct: 1705 LTDSSHLLWMSYSNSPDLGGTEEDDAKFHEELPKIEINQPDSYSTVCFELDLANLAVNTI 1764

Query: 1502 LKSNQVNEMEG--GGLFGFDQDMNSGP---------------------------YNNELC 1532
            L+S  + ++EG  GG      ++N+G                             NN+  
Sbjct: 1765 LESAHLADIEGIIGG------ELNNGDPTIFTQASQLQHQQQQQQQTPTQAPSRLNNK-- 1816

Query: 1533 GFDETTSSAPAFRVVKQLIQRCLTDAVTS---GNVFADAILQHLYRWLCSPHSKLHDPVL 1589
                  S    F ++++L+ +   D V      + +   +L H YRW+ SP+S L+DP+L
Sbjct: 1817 QMTHLNSCDKEFNILRKLVTKWSLDLVMGNKRAHQYPSILLTHFYRWISSPYSGLYDPIL 1876

Query: 1590 HRILHKVMQKVFAMLLAEFRKLGATIIFANFSKVIIDTGKFDLSAAKAYCDSLLKALQTR 1649
            HR LH +M+KVF  L+ EF+KLGA II+ NF+K+II T K  +  AKAYC  +L  ++ +
Sbjct: 1877 HRTLHGLMKKVFLQLVFEFKKLGAKIIYGNFNKLIICTQKQTVEDAKAYCQYILAVIKKK 1936

Query: 1650 ELFEWIELEPVHFWHSLLFMDQYNYGGIPA---------------------RADESLDD- 1687
            ELF W+ ++PV  WH+LL+MD  NY G+                       R + S D  
Sbjct: 1937 ELFSWLNIKPVKCWHNLLWMDSSNYSGVSVEEEKDQEQEEEEEELEGSTEKRRNHSPDTI 1996

Query: 1688 DSQVDIVSSWNIAEYLPKEIQDHFVLVVSEFM 1719
            D +++  S WNI+++LP+ +Q  F+LV+S+++
Sbjct: 1997 DGKLE--SHWNISDFLPQSLQTSFLLVISDYI 2026



 Score =  160 bits (404), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 82/210 (39%), Positives = 126/210 (60%), Gaps = 21/210 (10%)

Query: 1780 DAIHHMKKMNNDQHNSPGVMQTAANIHKVDAPLEFIKHVCAAFALDQNVQHDVLVMRKNL 1839
            DAIH    +       PG     +++   +  LEF+K VC   +LD+++  +V  +RKNL
Sbjct: 2130 DAIHLFPSL-------PG-----SHLSMTNPSLEFVKFVCHTLSLDRSLYSNVQRLRKNL 2177

Query: 1840 LKYVRVREFAPEAEFRDPCPSFILPNVICSYCNDCRDLDLCR-DMALLAQDWHCAMPQCG 1898
            +K + +REF+ EA+F DPC SF++P+VIC  C +CRDLDL R D +        A   C 
Sbjct: 2178 MKMINIREFSDEAKFNDPCLSFVMPDVICPTCYNCRDLDLLREDHSSTDGTSKLACSACH 2237

Query: 1899 QPYDREVMENALLQIVRQRERLYHLQDLVCIRCNQVKAAHLAEQCA-CAGSFRCKEDASD 1957
             PY+R ++E+ L++ V++R   YHLQD  C +C Q+KA +L+E CA C+G ++C+ ++SD
Sbjct: 2238 NPYNRSLIESVLVETVQRRSLSYHLQDFKCQKCGQIKADNLSEICATCSGQWQCRLNSSD 2297

Query: 1958 FRSKMQIFLNIANRQGFQLLQECTSWILEV 1987
            F   + IF NIA    F+       W+LE+
Sbjct: 2298 FNRDLTIFKNIAKYYQFE-------WLLEI 2320


>gi|403354822|gb|EJY76971.1| DNA polymerase [Oxytricha trifallax]
          Length = 2288

 Score = 1223 bits (3164), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 629/1410 (44%), Positives = 906/1410 (64%), Gaps = 86/1410 (6%)

Query: 25   EELEAKLGYDLFSEGDKRLGWLLTFASSSLEDEDTRKVYSCIDLYFVSQDGSTFKSKYKF 84
            +  E+ +G +      K++G+L  F + S +D++   + S I +YF+   G  FK+  ++
Sbjct: 21   DNFESSIGINFEELPAKKIGYLANFKTISFQDQNGGDL-SAILMYFIEPHGQWFKAMLQY 79

Query: 85   RPYFYAATKEKMEMDVEAYLRRRYESQIADIEILEKEDLDLKNHLSGLHKSYLKISFDTV 144
             PYFY     +   ++  YL + +E+ I+ I+ ++KEDL+L NHLSG  + YLK+SF  +
Sbjct: 80   EPYFYILCANEAVKEIVFYLNKTFENTISKIDYVDKEDLNLINHLSGKTQKYLKLSFKNI 139

Query: 145  QQLMDVKKDLLHVVERNQAKFDAAEAYESIL----TGKREQRPQDFLDCIVDLREYDVPY 200
            Q L+ V+ +L  +V+RN    +  E YE          ++     +L  I +LREYDV Y
Sbjct: 140  QDLVTVRNELQIIVQRNLKYKETMEVYEGFYDSSNLANQQMDSSQYLSKIYELREYDVNY 199

Query: 201  HIRFAIDNDVRCGQWYDVSISSTGPL---LEKRVDLLQRAEVHVCAFDIETTKLPLKFPD 257
            HIR AID ++R   WY+V +   GPL   ++   D L +A++ + AFDIETTK  LKFPD
Sbjct: 200  HIRVAIDLEIRTAFWYEVDMD--GPLVTNIKHLKDKLDKADLRILAFDIETTKAALKFPD 257

Query: 258  ADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFE-GYFKVTNVNNEIELLRL 316
            + +D IMMISY++DG+G+LI NR+ VG D+ED EY+PKPE++ G F V N  +E  LL  
Sbjct: 258  SRFDQIMMISYVIDGKGFLITNRQIVGGDVEDFEYSPKPEYDIGIFTVFNEADEKGLLDK 317

Query: 317  WFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDKNQGECRAKFACHL 376
            +F+H++E +P I+ T+NGD+FDW F++ R   +   + +++G  C+ +Q E   +FA H+
Sbjct: 318  FFSHIRETRPFIFTTFNGDFFDWVFIQDRCKFYDMTLEDQIGVYCN-SQSEYSGRFAVHM 376

Query: 377  DCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQMMASYSVSDAVA 436
            DCF WV+RD+YLPQGS GLKAVTKAKLGYDP+E++PE MV +AKE+PQ +A YSVSDAVA
Sbjct: 377  DCFYWVQRDAYLPQGSHGLKAVTKAKLGYDPVELDPELMVPYAKERPQELAEYSVSDAVA 436

Query: 437  TYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVICPNKHQSDPE 496
            TY+LY   +H FIF+L TIIP +PDEVLRKGSGTLCE LLM QA++ N+I PNK     E
Sbjct: 437  TYFLYQKMIHDFIFALCTIIPTNPDEVLRKGSGTLCEDLLMAQAFRCNIIFPNKQSDKFE 496

Query: 497  KFYRNHLLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQLLNNLDRDLQYAIKVEG 556
            KFY  HL++S+TYIGGHVECL +GV+RSD+P  F+L+ + Y+ L++  +  + +A+KVE 
Sbjct: 497  KFYHGHLIDSDTYIGGHVECLRTGVYRSDIPVKFRLEKAGYQHLIDQTEAIMDFALKVEL 556

Query: 557  KMDLESVSNYDEVKNAIMEKLLRLQEE-PIREECPLIYHLDVAAMYPNIILTNRLQPPSI 615
             +D   V+NYDE+++ I+ KL  +Q++ P  E  PLIYH+DVAAMYPNIIL+NRLQP +I
Sbjct: 557  NVDKNLVTNYDELRDDIIAKLQSIQQKCPSYEVEPLIYHVDVAAMYPNIILSNRLQPVAI 616

Query: 616  VTDEVCTACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYYHLKKQIESEFVDGTNGHLSKS 675
            V +++C  C FN+    C R L W W+GE F   R +Y  +K Q+E E ++  N +    
Sbjct: 617  VNEQICAGCIFNKDENNCKRNLNWQWKGEYFPLTRKEYEGVKTQLEYE-LEKDNENKPAQ 675

Query: 676  F---LDLPKMEQQSRLKDRLKKYCQKAYKRVLDKPVTELREAGICMRENSFYVDTVRSFR 732
            +   ++L    +Q  LK R+KKYC   YK V    + +L+   +CMRENSFYVDTVR FR
Sbjct: 676  YQREINLNTQNEQLLLKQRVKKYCSNVYKHVHQTKI-DLKSDTVCMRENSFYVDTVRDFR 734

Query: 733  DRRYEYKGLNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHKCILNSFYGYVMRK 792
            DRRY+YK L KVW GK +EA    N++KI+EA++++ LY+SLQLAHK ILNSFYGYVMR+
Sbjct: 735  DRRYDYKHLVKVWAGKYNEAVQENNALKIEEAKNLMNLYESLQLAHKIILNSFYGYVMRR 794

Query: 793  GARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLPGSFPENFTFKTKD 852
            GARWYSMEMA +VT+TG  II ++R L ++IG PLELDTDGIW +LP  FPE F+F+  +
Sbjct: 795  GARWYSMEMAAMVTHTGGSIIMDSRSLYDQIGMPLELDTDGIWTLLPKGFPEQFSFQLSN 854

Query: 853  LKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEFEVDGPYKAMILP 912
              KK   S+ C M NV +     N QYQTLVD  +  YET +E S+ FE+DGPY+AM++P
Sbjct: 855  -GKKANFSFICTMSNVLIYDKYGNKQYQTLVDKKTLEYETRTEMSVFFEIDGPYRAMVIP 913

Query: 913  ASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFLHGSTIEECY 972
            ASKEE  ++KKRYAVFN  G + E+KGFE+KRRGELKLIK+FQ E+F KFL G T++ECY
Sbjct: 914  ASKEENKMLKKRYAVFNHAGKMTEVKGFELKRRGELKLIKIFQEEVFSKFLEGKTLQECY 973

Query: 973  SAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLADYGEQKSCAVTTARRLSDF 1032
             A   VA RW D+LD +G+ + DSELI+YI ES  +SK+L++Y  +K+  VT A RLS+F
Sbjct: 974  DACGEVAERWYDILDTEGEYVDDSELIEYIGESRFLSKALSEYDGKKASMVTCAHRLSEF 1033

Query: 1033 LGDTMVKDKGLRCQYIVACEPQGTPVSERAVPVAIFETDAEIMKFYLRKWCKTSS--DVG 1090
            LG  +VK KG+  ++I++ +P    +++RA+P AIFE D  +MK +LRKW K +   D  
Sbjct: 1034 LGPEIVKGKGINVKFIISRKPVDAKIAQRAIPTAIFEADPNVMKKFLRKWMKDAGLQDFD 1093

Query: 1091 IRSIVDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLYKKVREKEDKFRQRKL 1150
            +RSI+DW YYK R+SS IQKIITIPAA+QK  NPVPR+ +PDWL+K+++ +++KF+Q+ +
Sbjct: 1094 MRSIIDWQYYKDRVSSTIQKIITIPAALQKCLNPVPRIQYPDWLHKRIKVQDEKFKQKDM 1153

Query: 1151 VDIFSSLKKDDFLNKTCNAETNLMDENVEDLEDFPKKRRNSVNGPRPIVRCFEVNNEQKT 1210
               F +  K                  + D+ED     ++S+  P   ++   +N+    
Sbjct: 1154 KYFFKNQVK---------------QPAIRDIED---SAQSSIAKP---IQKLSLNS---- 1188

Query: 1211 VKTTDQVDSLRQQLEPSE-----VSDQQPSSQNAIDTENIDRIVDYKGWLELKKRKWKDN 1265
              +T+QV++ + ++   +     + D  P   N            +K WL+ +K  W+  
Sbjct: 1189 --STNQVNAKKPEISAPQDKYGKIEDCPPPEDN------------FKDWLKYQKSNWRKI 1234

Query: 1266 LDRRKKQKLGSLRASHQANGVSESLGDMINHKEAQRRTGVGSYFRRQETAMTRCHWQIIQ 1325
                K++K                   +I     Q+  G+ S+ R  +  + +  W I+Q
Sbjct: 1235 RKDIKEEK------------------QVIKQTTVQKSQGLNSFIRNMDEVVLKSTWHILQ 1276

Query: 1326 LVPSSQSGVFLAWVVVE-GIMVRIPITVPRLFYLNSKDPIVEKFPGRRVNKTLPHGRRSF 1384
            +  + + GV   W + E G M  + + +PR  Y+NSK  + E    ++V K LP  R+++
Sbjct: 1277 ISETFEPGVMKVWAMTESGQMFAVKLKIPRTIYINSK-TVCEDADFKKVQKILPRERKAY 1335

Query: 1385 NLIEVMIDEDQFRKESKKLA-ALLADPEVE 1413
            +L E    ED F ++   L    L +P VE
Sbjct: 1336 HLYEWESSEDTFLEKFHNLTYHHLMNPTVE 1365



 Score =  182 bits (463), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 124/446 (27%), Positives = 211/446 (47%), Gaps = 76/446 (17%)

Query: 1408 ADPEVEVLGWQQNAAKIGMQRCAASSQWFNERISLARYA--------------------- 1446
             D E   L W + A K    R    + W  ++I+ ARY+                     
Sbjct: 1564 TDQEYPALDWIRFACKNMSIRFTEINDWVRDKINFARYSFVPVCNLDGDSSLFIIDTLYA 1623

Query: 1447 -------HILWISDDGVPDLGGTSEEDE--CFADEVHQPVLTYPGAYRKVSVELKIHHLS 1497
                   HILW SD   PDLGG  ++D    F DE+  P +   G YR  +VE+ I   +
Sbjct: 1624 RNLSQNRHILWYSDTSKPDLGGHEDKDFRIYFQDEIENPEIIQKGFYRNYTVEIDITEFA 1683

Query: 1498 VNALLKSNQVNEMEGGGLFGF-----DQDMNSGP----------YNNELCGFDETTSSAP 1542
            +N +L+S  + + E   +        D++ N G           ++N+L   DE  + A 
Sbjct: 1684 LNTILQSEYLKDFEEASMLATQYRQEDKNGNRGEGNFAKVAKQDFDNDL---DEYVTCAG 1740

Query: 1543 AFRVVKQLIQRCLTDAVTSGNVFADAILQHLYRWLCSPH-SKLHDPVLHRILHKVMQKVF 1601
             F+ ++ L+  C    +   + +AD +   LYRW+ SP  +KL+DP+LHR++H++M+K F
Sbjct: 1741 IFKRLRDLVN-CWIKDIIEDDQYADRLTHSLYRWITSPTGAKLYDPLLHRLVHQLMKKTF 1799

Query: 1602 AMLLAEFRKLGATIIFANFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVH 1661
              ++   +KLG  +I+ANF K+II T +     A+ + + +   ++   +F +I + P  
Sbjct: 1800 YQMIYRLKKLGCQVIYANFHKLIIHTQRDTFEEAENFINFVTHTIKQDPMFSFITMTPNE 1859

Query: 1662 FWHSLLFMDQYNYGGIPARADESLDDDSQVDIVSSWNIAEYLPKEIQDHFVLVVSEFMYI 1721
            ++  LLF D YN+GGI         + +   + + W+I  +LP+ IQ  F++ + EF+  
Sbjct: 1860 YYKILLFKDYYNFGGIK--------ESNPSKVSNKWDICLHLPEAIQKKFLITIGEFILK 1911

Query: 1722 PWKHAQKLAAS----RASLQEGSSCTPSITVAAAEN---FESHI--VQYVKGE------- 1765
             +KH +K+  S    RA +  GS+    +     E+    ES++  V  +K E       
Sbjct: 1912 VYKHNKKMLESGQYDRAHMAAGSNQDNGLKEMMNEDSKKIESYMDTVDDIKKERDHDYIV 1971

Query: 1766 --ISSYFTGKLLSIVRDAIHHMKKMN 1789
              IS YF+ KL  +V + +   + MN
Sbjct: 1972 HVISEYFSQKLFPLVGELLAKKEDMN 1997



 Score = 99.0 bits (245), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 53/161 (32%), Positives = 85/161 (52%), Gaps = 20/161 (12%)

Query: 1809 DAPLEFIKHVCA-AFALDQNVQHDVLVMRKNLLKYVRVREFAPEA-EFRDPCPSFILPNV 1866
            +A LEF K VC   F LD+  Q  V  +++NLL  +R +EF+       +P    ++P+V
Sbjct: 2077 NAALEFSKQVCKNVFGLDEAFQTQVTTLKRNLLSIIREKEFSTTVVSATEPSLILVVPDV 2136

Query: 1867 ICSYCNDCRDLDLCRDMAL---LAQD-------------WHCAMPQCGQPYDREVMENAL 1910
            IC++C   +DLD+CRD +L   L Q+             W C   QC    ++ ++E  L
Sbjct: 2137 ICTFCQTSKDLDICRDPSLNKDLHQNNLTTEQISAENSQWFCQ--QCDSALNKGLIERRL 2194

Query: 1911 LQIVRQRERLYHLQDLVCIRCNQVKAAHLAEQCACAGSFRC 1951
            ++++ +R   Y +QDL CI+C  VK   ++  C C G F+ 
Sbjct: 2195 VELLNRRAVGYQIQDLKCIKCLMVKNTIVSRYCQCTGQFKA 2235


>gi|268570106|ref|XP_002640693.1| Hypothetical protein CBG19758 [Caenorhabditis briggsae]
          Length = 2152

 Score = 1217 bits (3148), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 657/1418 (46%), Positives = 889/1418 (62%), Gaps = 91/1418 (6%)

Query: 10   DGRRTKKQKLIRSAEEELEAKLGYDLFSEGDKRLGWLLTFASSSLEDEDTRKVYSCIDLY 69
            D    ++  LI+S  + ++AKLG+  ++   ++ G+L+    S L DE T+ + S +D +
Sbjct: 15   DANYKERLSLIKS-NDAIDAKLGFVRYTGIQEKKGFLINIQPSELVDEQTKVIVSVVDYF 73

Query: 70   FVSQDGSTFKSKYKFRPYFYAATKEKMEMDVEAYLRRRYESQIADIEILEKEDLDLKNHL 129
            F+S     FK  Y FRPYFY AT +  E  V +YL ++Y +Q A +E ++KEDLDLK+HL
Sbjct: 74   FISDMDERFKISYPFRPYFYIATLDGFEFQVSSYLSKKYGAQ-AQVEHMDKEDLDLKDHL 132

Query: 130  SGLHKSYLKISFDTVQQLMDVKKDLLHVVERNQAKFDAAEAYESILT----GKR------ 179
            SGL K+Y+K+SF +  ++M ++KDL+ +V +N  +     AY   L     GK       
Sbjct: 133  SGLKKTYIKLSFTSTVEMMKIRKDLMPLVRKNTDRIKKESAYADYLARNLGGKGGSGTSD 192

Query: 180  EQRPQDFLDCIVDLREYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLLEKRVDLLQR--- 236
             Q   D L+ IVD+REYDVP+H+R +ID  +  G WYDV     GP    RV  ++R   
Sbjct: 193  AQLNGDILNQIVDIREYDVPFHMRVSIDEKIFVGLWYDVK--GVGP---NRVPTIKRKDL 247

Query: 237  ----AEVHVCAFDIETTKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEY 292
                A+  V AFDIETTKLPLKFPD + D IMMISYM+DG+G+LIINRE V  DI   EY
Sbjct: 248  AFFHAKPRVLAFDIETTKLPLKFPDRESDEIMMISYMVDGRGFLIINREIVSADINAFEY 307

Query: 293  TPKPEFEGYFKVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFK 352
            TPK E++G F V N  +E  L+R +F H  +V+P I VTYNGD+FDWPF+E RA   GF 
Sbjct: 308  TPKAEYKGEFTVWNEKDETALIRKFFDHFLQVRP-IVVTYNGDFFDWPFVEARAKIRGFN 366

Query: 353  MSEELGFQCDKNQGECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNP 412
            M +E+GF  D +  E +++   H+D F WVKRDSYLP GSQ LKAVTKAKL YDP+EV P
Sbjct: 367  MEKEIGFSKD-SADEYKSRNCIHMDAFRWVKRDSYLPVGSQNLKAVTKAKLRYDPVEVEP 425

Query: 413  EDMVRFAKEKPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLC 472
            E M + A+E+PQ +A+YSVSDAV+TYYLYM YVH FIF+L TIIP+  D+VLRKGSGTLC
Sbjct: 426  ELMCKMAREQPQQLANYSVSDAVSTYYLYMKYVHQFIFALCTIIPLGADDVLRKGSGTLC 485

Query: 473  EMLLMVQAYKANVICPNKHQSDPE-KFYRN-HLLESETYIGGHVECLESGVFRSDLPTSF 530
            E LLMV+A+ +N++ PNK+    E +F ++ H +ESETY+GGHVE LE+GVFR+D+P  F
Sbjct: 486  EALLMVEAFHSNIVFPNKYTGPEETRFSKDGHRVESETYVGGHVEALEAGVFRADIPARF 545

Query: 531  KLDPSAYEQLLNNLDRDLQYAIKVEGKMDLESVSNYDEVKNAIMEKLLRLQEEPIREECP 590
            +L   A EQL + +   L+  +  E ++ L+ V N+++    + E    L   P R E P
Sbjct: 546  RLSVDALEQLKSEVPETLRKELAREFEVSLDHVENFEQQCAEVEEAFDGLIAVPNRLENP 605

Query: 591  LIYHLDVAAMYPNIILTNRLQPPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEIFMGKR 650
             IYHLDV AMYPNIILTNRLQP ++V +E+C  C FN P   C R + W WRGE+    R
Sbjct: 606  RIYHLDVGAMYPNIILTNRLQPCAMVNEEICMGCSFNMPDAECKRTMAWEWRGELTPATR 665

Query: 651  SDYYHLKKQIESEFVDGTNGHLSKSFLDLPKMEQQSRLKDRLKKYCQKAYKRV-LDKPVT 709
             +Y  + +Q+E+E    + G   K F  L + E+++    R+K Y ++ Y +  L K   
Sbjct: 666  GEYQQIMQQLEAE----SFGKPPKHFHMLERAEREAIEMKRVKDYSRRVYGKTHLTK--L 719

Query: 710  ELREAGICMRENSFYVDTVRSFRDRRYEYKGLNKVWKGKLSEAKASGNSIKIQEAQDMVV 769
            E+RE  IC REN FYV+TV++FRDRRYEYK + K  KG+  +A+A  +   +  ++  +V
Sbjct: 720  EMRETMICQRENHFYVETVKAFRDRRYEYKDMLKKAKGRFDQAQAENDLATVATSKLEMV 779

Query: 770  LYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLEL 829
            LY+SLQLAHKCILNSFYGYVMRKG+RWYSMEMAG+V +TGA II+ AR L++KIGKPLEL
Sbjct: 780  LYESLQLAHKCILNSFYGYVMRKGSRWYSMEMAGIVCHTGANIIKEARKLVDKIGKPLEL 839

Query: 830  DTDGIWCVLPGSFPENFTFKTKDLKK-KLTISYPCVMLNVDVARNNTNDQYQTLVDPVSK 888
            DTDGIWC++P SFPEN TFK K+ K+ ++T+SYP  MLN  V    TN QY TL    S 
Sbjct: 840  DTDGIWCLIPASFPENVTFKLKNHKRNQVTVSYPGAMLNALVYEGFTNHQYFTLQKDGS- 898

Query: 889  TYETHSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGEL 948
             Y   SE SI FEVDGPY+ M+LPASKEEG  +KKRYAVFN DG+LAE+KGFE+KRRGEL
Sbjct: 899  -YLKSSENSIYFEVDGPYQCMVLPASKEEGKKLKKRYAVFNLDGSLAEMKGFELKRRGEL 957

Query: 949  KLIKVFQAELFDKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTM 1008
             +IK FQ+ +F  FL+G T+EE Y AVA  AN WLD+L + G++I+D EL D ISE+ +M
Sbjct: 958  NIIKHFQSHVFKTFLNGKTLEETYKAVAGDANHWLDILHSHGEEISDEELFDLISENRSM 1017

Query: 1009 SKSLADYGEQKSCAVTTARRLSDFLGDTMVKDKGLRCQYIVACEPQGTPVSERAVPVAIF 1068
            S+ L DYG QKS +++TA+RL++FLGD MVKD GL C +I++  P G PV+ERA+PVAIF
Sbjct: 1018 SRKLEDYGSQKSTSISTAKRLAEFLGDDMVKDAGLACMFIISRHPVGAPVTERAIPVAIF 1077

Query: 1069 ETDAEIMKFYLRKWCKTS---SDVGIRSIVDWSYYKQRLSSAIQKIITIPAAMQKVSNPV 1125
            + D+++   Y+RKW K      D  IR ++DW YY +R  S IQKIITIPAA+Q V NPV
Sbjct: 1078 KADSKVKSHYIRKWTKQQDYDEDTDIRDMLDWDYYIERFGSCIQKIITIPAALQGVVNPV 1137

Query: 1126 PRVVHPDWLYKKVREKEDKFRQRKLVDIFSSLKKDDFLNKTCNAETNLMDENVEDLEDFP 1185
            PRV HPDWL  K+R K D  +Q ++  IF++ +K    N T          +V+  +D  
Sbjct: 1138 PRVPHPDWLQNKIRNKVDAHKQPRINQIFAACQKPSTSNNTLENGKRRRSPDVDSSDDVI 1197

Query: 1186 KKRRNSVNGPRPIVRCFEVNNEQKTVKTTDQVDSLRQQLEPSEVSDQQPSSQNAIDTENI 1245
             +  +S  G           +++   K    V++ + Q   +EV +++    +  D    
Sbjct: 1198 AEDVDSQEG-----------DKENLAKRKKAVETKKNQ--EAEVLEKKTLVDHGFD---- 1240

Query: 1246 DRIVDYKGWLELKKRKWKDNLDRRKKQKLGSLRASHQANGVSESLGDMINHKEAQRRTGV 1305
                    WL   K+KW+     RK Q                        K A+    V
Sbjct: 1241 -------DWLGFLKKKWRIQRKERKNQL-----------------------KTARDSDAV 1270

Query: 1306 GSYFRRQETAMTRCHWQIIQLVPSSQSGVFLAWVVVEGIMVRIPITVPRLFYLNSKDPIV 1365
             +  R    A +   W I+ + P++ S  F  W+ V+G M ++ + V R   ++S+ P  
Sbjct: 1271 DTIVRGAREAESEREWHILSVEPTADSSFFNVWMSVQGQMQKLTLKVGRKILVDSRAPRG 1330

Query: 1366 EKFPGRRVNKTLPHGRRSFNLIEVMIDEDQFRKESKKL 1403
             +   RRV   LPH +    L E   DE Q      KL
Sbjct: 1331 NRETVRRV---LPHHKPPGYLYEFKTDEAQLTALMDKL 1365



 Score =  157 bits (396), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 141/582 (24%), Positives = 245/582 (42%), Gaps = 89/582 (15%)

Query: 1442 LARYAHILWISDDGVPDLGGTSEEDECFADE-----VHQPVLTYPGAYRKVS-VELKIHH 1495
            L +  H LW +    PDLGG   +D   + +     V   VL     + + + VEL++  
Sbjct: 1623 LKKSGHALWATKSSRPDLGGKELDDIRLSIDWNPLSVDDTVLLNRETFCETACVELQLSA 1682

Query: 1496 LSVNALLKSNQVNEMEGGG-LFGFD------QDMNSGPYNNELCGFDETTSSAPAFRVVK 1548
            ++V AL++ ++V E EG   +  FD      Q   +G   N +  +DE    A + +++K
Sbjct: 1683 VAVTALVQRSRVLEAEGADDVVTFDSMNTIAQQSVTGGTQNSIACYDEAAVDA-SIKILK 1741

Query: 1549 QLIQRCLTDAVTSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEF 1608
            Q++  C+      GN  AD ++  + RWL +  + L D  L R +  +  K+  +L AE 
Sbjct: 1742 QMLTECVRHIAHQGNRHADEVVMTVSRWLNTRSALLFDSALTRSISVLESKLVLLLCAEC 1801

Query: 1609 RKLGATIIFANFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLF 1668
             ++GA +I A   K++++TGK     AK + + L+ +L T  +F  + + PV F+ S+L+
Sbjct: 1802 ERIGAKVIHATAQKLVLNTGKMTSEEAKGFVEMLILSLSTNVVFAALHITPVKFFDSMLW 1861

Query: 1669 MDQYNYGGI---------PARADESLDDDS--------QVDIVSSWNIAEYLPKE--IQD 1709
            MD +N+ GI         P   D+S+   S        Q +  + W IAE +P E  I+D
Sbjct: 1862 MDAHNHTGICIVDGDSDSPDVIDDSVPTSSSSQPQATRQFETTAIWKIAEEMPDESNIRD 1921

Query: 1710 HFVLVVSEFMYIPWKHAQKLAASRASLQEGSSCTPSITVAAAENFESHIVQYVKGEISSY 1769
             F+ ++  F+       + L  +R                +A  F + +       IS  
Sbjct: 1922 EFLQMIGAFIL------EFLETNREV---------QFDTESAATFRADV-------ISQK 1959

Query: 1770 FTGKLLSIVRDAIHHMKKMNNDQHNSPGVMQTAANIHKVDAPLEFIKHVCAAFALDQNVQ 1829
             + +L  +V   +H+                   N          +  +C A + DQ  Q
Sbjct: 1960 ISHRLYRVVNKLVHN-------------------NAESAHCATYLVNAICRALSCDQTSQ 2000

Query: 1830 HDVLVMRKN---LLKYVRVR-EFAPEAEFRDPCPSFILPNVICSYCNDCRDLDLCRDMAL 1885
              V  +R N   LL  V V  +  P  +      +  + NV CS C+   ++ L     +
Sbjct: 2001 LAVEGVRDNARRLLHNVVVEVDMTPLRQ-----TTLFVSNVFCSSCSQASNVFLSSTDEI 2055

Query: 1886 LAQDWHCAMPQCGQPYDREVMENALLQIVRQRERLYHLQDLVCIRCNQVKAAHLAEQCAC 1945
            L     C    C    + +V++  +   + Q    Y +QD  C +C  V+   L   C C
Sbjct: 2056 LT----CTT--CQSKLNSDVIDMMICDRLNQLLTAYQIQDHQCAKCRSVRHDTLPLYCEC 2109

Query: 1946 AGSFRCKEDASDFRSKMQIFLNIANRQGFQLLQECTSWILEV 1987
               F  +   S  + +      +AN + F L  E  +WIL++
Sbjct: 2110 CSPFNPQITPSQLKHEATTVETVANIRNFTLSSELATWILKM 2151


>gi|453080730|gb|EMF08780.1| DUF1744-domain-containing protein [Mycosphaerella populorum SO2202]
          Length = 1958

 Score = 1214 bits (3142), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 614/1188 (51%), Positives = 808/1188 (68%), Gaps = 67/1188 (5%)

Query: 243  AFDIETTKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYF 302
            A+DIETTKLPLKFPDA  D IMMISYM+DGQG+LI NRE V EDIED +YTPKPEFEG F
Sbjct: 2    AYDIETTKLPLKFPDAAIDQIMMISYMIDGQGFLITNREIVSEDIEDFDYTPKPEFEGPF 61

Query: 303  KVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCD 362
             + N +NE  +L  +F+ ++E +P + VTYNGD+FDWPF+E RA+ HG  M +E+GF+  
Sbjct: 62   MIFNESNEEAVLVRFFSCIKEARPTVMVTYNGDFFDWPFVEARASVHGMDMYQEIGFR-- 119

Query: 363  KNQGECRAKFAC-HLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKE 421
            KN  +      C H+D FAWV RDSYLPQGS+GLKAVT AKLGYDP E++PE M  +A+E
Sbjct: 120  KNSEDVYQSTHCAHMDAFAWVSRDSYLPQGSRGLKAVTVAKLGYDPDELDPELMTPYAQE 179

Query: 422  KPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAY 481
            +PQ +A YSVSDAVATYYLYM YVHPFIFSL TIIP+ PD+VLRKG+GTLCEMLLMVQAY
Sbjct: 180  RPQTLAEYSVSDAVATYYLYMKYVHPFIFSLCTIIPLGPDDVLRKGTGTLCEMLLMVQAY 239

Query: 482  KANVICPNKHQSDPEKFYRNHLLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQLL 541
            +  ++ PNKH    E F+  HLLESETY+GGHVE +E GVFRSD+P +F +D +A ++LL
Sbjct: 240  QKEIVLPNKHVQARESFWEGHLLESETYVGGHVESIECGVFRSDIPNNFAIDTTAIDELL 299

Query: 542  NNLDRDLQYAIKVEGKMDLESVSNYDEVKNAIMEKLLRLQEEPIREECPLIYHLDVAAMY 601
              LD  L++ I+VE K + + V NY+E+K  I+++L++L+  P R E PLIYHLDVA+MY
Sbjct: 300  EGLDAALRFTIEVEEKKNFDDVENYEEIKAQIVDRLMQLKATPNRSERPLIYHLDVASMY 359

Query: 602  PNIILTNRLQPPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYYHLKKQIE 661
            PNI+ TNRLQP S+V +  C ACDFNRPGKTC R++ W WRGE    KR +Y  ++  +E
Sbjct: 360  PNIMTTNRLQPDSMVDEADCAACDFNRPGKTCDRRMPWSWRGEFLPAKRDEYNMIRHALE 419

Query: 662  SEFVDGTNG--HLSKSFLDLPKMEQQSRLKDRLKKYCQKAYKRVLDKPVTELREAGICMR 719
            +E   G  G    +++F DL   EQ   ++ RL  Y +K Y ++ +    E REA IC R
Sbjct: 420  NEKFPGKFGPDSAARAFQDLSLDEQAGLVRKRLTDYSKKIYHKIHETKTIE-REAIICQR 478

Query: 720  ENSFYVDTVRSFRDRRYEYKGLNKVWKGKLSEAKASGNSI-KIQEAQDMVVLYDSLQLAH 778
            EN FYVDTV+ FRDRRY++KG  KVWKGK SE + +G +  +I EA+ M+VL+DSLQLAH
Sbjct: 479  ENPFYVDTVKDFRDRRYDFKGKQKVWKGKTSELEKAGAAPGEIDEAKKMIVLFDSLQLAH 538

Query: 779  KCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVL 838
            K ILNSFYGYVMRKG+RWYSMEMAGV   TGA+IIQ AR ++E++G+PLELDTDGIWC+L
Sbjct: 539  KVILNSFYGYVMRKGSRWYSMEMAGVTCLTGARIIQMARQIVERVGRPLELDTDGIWCIL 598

Query: 839  PGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSI 898
            P +FPENF FK K+  KKL ISYPC MLN  V    TN QY+ L DP +  YE HS+ +I
Sbjct: 599  PATFPENFAFKMKN-GKKLAISYPCAMLNHLVHAGFTNHQYEELKDPTTFKYEKHSDNTI 657

Query: 899  EFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAEL 958
             FEVDGPY+AMILP SK+E   +KKRYAVFNDDG+LAELKGFE+KRRGEL+LIK+FQ ++
Sbjct: 658  FFEVDGPYRAMILPTSKDEDRNLKKRYAVFNDDGSLAELKGFEVKRRGELRLIKIFQQQI 717

Query: 959  FDKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLADYGEQ 1018
            F  FL GST+ E Y AVA VAN+WLD+L + G  +AD ELID I E+ +M+K+L +YG Q
Sbjct: 718  FKFFLEGSTLAETYGAVAKVANKWLDVLHSHGSMLADEELIDLICENKSMTKTLEEYGAQ 777

Query: 1019 KSCAVTTARRLSDFLGDTMVKDKGLRCQYIVACEPQGTPVSERAVPVAIFETDAEIMKFY 1078
            KS A+TTA+RL++FLG+ MVKDKGL C+YI++  P+  PV+ERA+PVAI   +  + ++Y
Sbjct: 778  KSTAITTAKRLAEFLGEQMVKDKGLNCKYIISSRPKNAPVTERAIPVAILSAEDSVKRYY 837

Query: 1079 LRKWCKTS-SDVGIRSIVDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLYKK 1137
            LRKW K     +  R ++DW YY +RL S IQK+ITIPAA+QK+ NPVPRV HPDWL ++
Sbjct: 838  LRKWMKEDPGSMDPRDLIDWDYYLERLGSVIQKLITIPAALQKIKNPVPRVAHPDWLNRR 897

Query: 1138 VREKEDKFRQRKLVDIF--SSLKKDDFLNKTCNAETNLMDENVEDLEDF-PKKRRNSVNG 1194
            + +KEDKF+Q K+ D+F   +LK+ D   +   +  ++ D     L  F P     +V  
Sbjct: 898  IAQKEDKFQQAKMTDMFQKQALKERDANRQPVRSSGDMEDFGSTALSKFKPGSATKAVAS 957

Query: 1195 PRPIVRCFEVNNEQKTVKTTDQVDSLRQQLEPSEVSDQQPSSQNAIDTENIDRIVDYKGW 1254
             +  +R     +E     T +  DSL             P+   +I TE      DY GW
Sbjct: 958  QKRKIR-----DEPTLPATINPYDSL-------------PAVMPSI-TE------DYVGW 992

Query: 1255 LELKKRKWKDNLDRRKKQKLGSLRASHQANGVSESLGDMINHKEAQRRTGVGSYFRRQET 1314
            L+ +K+KWK     RK+++                   +   K       +G++FR Q  
Sbjct: 993  LQYQKKKWKIQKAARKRRR------------------QLFGEKRQDATDAIGTFFRNQAE 1034

Query: 1315 AMTRCHWQIIQLVPSSQSGVFLAWVVVEGIMVRIPITVPRLFYLNSKDPIVEKFPG---- 1370
             +    WQI+QL  +   G   A+++++  + ++ + VPR  YLN KD   E+ P     
Sbjct: 1035 LLYTADWQILQLRETDSPGEVRAFILIDKKVHQLKVVVPRQIYLNLKD---EELPDVTVD 1091

Query: 1371 -----RRVNKTLPHGRRSFNLIEVMIDEDQFRKESKKLAALLADPEVE 1413
                 + VN TLP+G  S +L ++ + E  + KE++KL+ L     VE
Sbjct: 1092 GVKAEKIVNHTLPNGHPSTHLFKLTMPEQVYVKETEKLSMLFNHSSVE 1139



 Score =  220 bits (561), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 167/636 (26%), Positives = 289/636 (45%), Gaps = 71/636 (11%)

Query: 1400 SKKLAALLADPEVEVLGWQQNAAKIGMQRCAASSQWFNERISLARYAH------------ 1447
            S +L A  +D ++  LGWQ   AK  +        W +  +  ARY +            
Sbjct: 1327 SLRLKADESDKQLPPLGWQSFVAKRLVSHYLDLGSWISHLLEFARYGNVPLCNLEMDDPR 1386

Query: 1448 ----------------ILWISDDGVPDLGGTSEEDECFADEV-HQPVLTYPGAYRKVSVE 1490
                            ILW S+D  PD  G  ++D     EV   P +  PG Y  V ++
Sbjct: 1387 FLIDIAYARRLQKERVILWWSEDARPDHAGHEKDDILGGMEVVDMPSVNNPGTYSSVCID 1446

Query: 1491 LKIHHLSVNALLKSNQVNEMEG--GGLFGFDQDMNSGPYNNELCGFDETTSSAPAFR--- 1545
            L I +L++N +L S  +N+ EG  G   G      +G   + L    +   S  AF    
Sbjct: 1447 LSIKNLAINTILSSAVLNDAEGSSGDPLGVS---GAGAQEDALDDTAQNLQSENAFASAG 1503

Query: 1546 --VVKQLIQRCLTDAVTS-GNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFA 1602
               ++++++     A  S G   AD ++QHL RW+ SP S L+D  LH  +  + +K F 
Sbjct: 1504 IGALREMVRAWWQQACASDGCPMADTLVQHLVRWVESPSSHLYDRNLHYYVQTMSRKAFQ 1563

Query: 1603 MLLAEFRKLGATIIFANFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHF 1662
             L++EFR++G+ ++FAN  ++++ T K ++  A AY + +LK + T+  F +++L    +
Sbjct: 1564 QLMSEFRRVGSHVVFANAGRLLLQTSKAEVGNAFAYSEYILKTINTKPAFHFLDLAITEY 1623

Query: 1663 WHSLLFMDQYNYGG-----IPARADESLDDDSQVDIVSSWNIAEYLPKEIQDHFVLVVSE 1717
            W  L + D++NYGG     + A ++++LD       +  W IA +LP+ +Q  F   V E
Sbjct: 1624 WDYLAWYDEFNYGGKGCVEVVAESEQTLD------TIMHWQIATFLPEILQPFFNQWVVE 1677

Query: 1718 FMYIPWKHAQKLAASRASLQEGSSCTPSITVAAAENFESHIV-QYVKGEI-SSYFTGKLL 1775
              YI   H +K  A    L  G++   +     A  F S    Q   G +    F+  L 
Sbjct: 1678 --YIEIMHGRKRPAG---LMNGATPRATQLPIHASIFNSEKDDQTTPGTVLQKTFSKPLH 1732

Query: 1776 SIVRDAIHHMKKMN-NDQHNSPGVMQT--AANIHKVDAPLEFIKHVCAAFALDQNVQHDV 1832
              ++  I   +  + +++  S     T   +++H  +  LE +K +    +LD+ +  + 
Sbjct: 1733 KQIQHLIKRQRTESLHEELFSDWTFPTMPGSHLHPQNPVLELVKSLMQVLSLDKTISLEA 1792

Query: 1833 LVMRKNLLKYVRVREFAPEAEFRDPCPSFILPNVICSYCNDCRDLDLCRDMALLAQDWHC 1892
             ++RK+LL    +REF+ E  F +P  +  +  + C  C   +D+DLCRD  L       
Sbjct: 1793 RLLRKDLLHLFDIREFSSEGTFSNPSSTLCIKQLSCPQCCVPKDIDLCRDSDLALPTNSN 1852

Query: 1893 AM-------PQ---CGQPYDREVMENALLQIVRQRERLYHLQDLVCIRCNQVKAAHLAEQ 1942
                     PQ   C   +D   +E  LL  V +    +  QDL C +C +V+     E 
Sbjct: 1853 NNNNEIILSPQCDNCSHRFDFLAIEERLLSDVSKLALQWMSQDLTCKKCKRVRTNDFMEH 1912

Query: 1943 CACAGSFRCKEDASDFRSKMQIFLNIANRQGFQLLQ 1978
            CACAG +    D      +++++ +++   G ++L+
Sbjct: 1913 CACAGEWVGTVDRGKILRELKVYESVSRFYGLKMLE 1948


>gi|17507143|ref|NP_493616.1| Protein F33H2.5 [Caenorhabditis elegans]
 gi|3876643|emb|CAB04263.1| Protein F33H2.5 [Caenorhabditis elegans]
          Length = 2144

 Score = 1214 bits (3141), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 649/1411 (45%), Positives = 885/1411 (62%), Gaps = 79/1411 (5%)

Query: 10   DGRRTKKQKLIRSAEEELEAKLGYDLFSEGDKRLGWLLTFASSSLEDEDTRKVYSCIDLY 69
            D    ++  LIRS  +E++AKLG+  ++   ++ G+L+    S L DE T+ + S +D +
Sbjct: 15   DSNYKERLALIRS-NDEIDAKLGFSRYTGLQEKKGFLINIQPSELVDEQTKVIISVVDYF 73

Query: 70   FVSQDGSTFKSKYKFRPYFYAATKEKMEMDVEAYLRRRYESQIADIEILEKEDLDLKNHL 129
            F+S     FK  Y FRPYFY AT +  E  V +YL ++Y +Q A +E +++EDLDLK+HL
Sbjct: 74   FISDMDERFKISYPFRPYFYIATLDGFEFQVSSYLSKKYGAQTA-VEHMDREDLDLKDHL 132

Query: 130  SGLHKSYLKISFDTVQQLMDVKKDLLHVVERNQAKFDAAEAYESILT---------GKRE 180
            SGL K+Y+K+SF +  +L+ ++K+L+ +V +N  +     AY   L           K +
Sbjct: 133  SGLKKTYIKLSFTSTVELIKIRKELMPLVRKNTDRIKKESAYADYLARNLSGKGGDSKDQ 192

Query: 181  QRPQDFLDCIVDLREYDVPYHIRFAIDNDVRCGQWYDV-SISSTGPLLEKRVDL-LQRAE 238
            Q   D L+ IVD+REYDVP+H+R +ID  +  G WYDV  I        KR DL L  A+
Sbjct: 193  QLNGDILNQIVDIREYDVPFHMRVSIDEKIFVGLWYDVKGIGPNRVPTIKRKDLPLFHAK 252

Query: 239  VHVCAFDIETTKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEF 298
              V AFDIETTKLPLKFPD + D IMMISYM+DG+G+LIINRE V  DI   EYTPK E+
Sbjct: 253  PKVLAFDIETTKLPLKFPDRESDEIMMISYMVDGRGFLIINREIVSADINAFEYTPKAEY 312

Query: 299  EGYFKVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELG 358
             G F V N  +E  L+R +F H  +V+P I VTYNGD+FDWPF+E RA   GF M  E+G
Sbjct: 313  IGEFTVWNEKDEAALIRKFFDHFLQVRPNIVVTYNGDFFDWPFVEARAKIRGFNMEREIG 372

Query: 359  FQCDKNQGECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRF 418
            F  D +  E +++   H+D F WVKRDSYLP GSQ LKAVTKAKL YDP+EV PE M + 
Sbjct: 373  FSKD-SADEYKSRNCIHMDAFRWVKRDSYLPVGSQNLKAVTKAKLRYDPVEVEPELMCKM 431

Query: 419  AKEKPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMV 478
            A+E+PQ +A+YSVSDAV+TYYLYM YVH FIF+L TIIP+  D+VLRKGSGTLCE LLMV
Sbjct: 432  AREQPQQLANYSVSDAVSTYYLYMKYVHQFIFALCTIIPLGADDVLRKGSGTLCEALLMV 491

Query: 479  QAYKANVICPNKHQSDPE-KFYRN-HLLESETYIGGHVECLESGVFRSDLPTSFKLDPSA 536
            +A+  N++ PNK+    E +F ++ H +ESETY+GGHVE LE+GVFR+D+P  F+L   A
Sbjct: 492  EAFHNNIVFPNKYTGPEETRFSKDGHRVESETYVGGHVEALEAGVFRADIPAKFRLSVPA 551

Query: 537  YEQLLNNLDRDLQYAIKVEGKMDLESVSNYDEVKNAIMEKLLRLQEEPIREECPLIYHLD 596
             EQL + +   L+  +  E ++ L+ V ++DE    + +    +   P R E P IYHLD
Sbjct: 552  LEQLKSEIQETLRKELAREFEVTLDQVVDFDEQCAEVQDAFDGMINVPTRLENPRIYHLD 611

Query: 597  VAAMYPNIILTNRLQPPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYYHL 656
            V AMYPNIILTNRLQP ++VT+E+C  C +N+P   C R + W WRGE+    R +Y  +
Sbjct: 612  VGAMYPNIILTNRLQPCAMVTEEICMGCSYNKPDAECKRTMAWEWRGELTPATRGEYQQI 671

Query: 657  KKQIESEFVDGTNGHLSKSFLDLPKMEQQSRLKDRLKKYCQKAYKRVLDKPVTELREAGI 716
             +Q+E+E    + G   K F  L + E+++    R+K Y ++ Y +     + E+RE  I
Sbjct: 672  MQQLEAE----SFGKPPKHFHMLERSEREAIEMKRIKDYSRRVYGKTHLTRL-EMRETTI 726

Query: 717  CMRENSFYVDTVRSFRDRRYEYKGLNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQL 776
            C REN FYV+TV++FRDRRYEYK + K  KG+  +A+A+ +   +  ++  +VLY+SLQL
Sbjct: 727  CQRENHFYVETVKAFRDRRYEYKDMLKKAKGRFDQAQATNDLATMTTSKLEMVLYESLQL 786

Query: 777  AHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWC 836
            AHKCILNSFYGYVMRKG+RW+SMEMAG+V +TGA II+ AR L+E+IG PLELDTDGIWC
Sbjct: 787  AHKCILNSFYGYVMRKGSRWFSMEMAGIVCHTGANIIREARKLVEQIGTPLELDTDGIWC 846

Query: 837  VLPGSFPENFTFKTKDLKKK-LTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSE 895
            ++P SFPEN TFK K+ K+  +T+SYP  MLN  V    TN QY TL    S  Y   SE
Sbjct: 847  LIPASFPENVTFKLKNHKRSSVTVSYPGAMLNALVYEGFTNHQYHTLEKDGS--YSKSSE 904

Query: 896  CSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQ 955
             SI FEVDGPY+ MILPASKEEG  +KKRYAVFN DG+LAE+KGFE+KRRGEL +IK FQ
Sbjct: 905  NSIYFEVDGPYQCMILPASKEEGKKLKKRYAVFNLDGSLAEMKGFELKRRGELNIIKHFQ 964

Query: 956  AELFDKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLADY 1015
              +F  FL+G T+EE Y AVAA A+ WLD+L + G D+ D EL D ISE+ +MS+ L DY
Sbjct: 965  GCVFKTFLNGKTLEETYKAVAADADHWLDILHSHGADLTDEELFDLISENRSMSRKLEDY 1024

Query: 1016 GEQKSCAVTTARRLSDFLGDTMVKDKGLRCQYIVACEPQGTPVSERAVPVAIFETDAEIM 1075
            G QKS +++TA+RL++FLGD MVKD GL C +I++  P G PV+ERA+PVAIF++DA++ 
Sbjct: 1025 GAQKSTSISTAKRLAEFLGDDMVKDAGLACMFIISKHPIGAPVTERAIPVAIFKSDAKVR 1084

Query: 1076 KFYLRKWCKT---SSDVGIRSIVDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPD 1132
              Y+RKW K    + D  IR ++DW YY +R  S IQKIITIPAA+Q +SNPVPRV HPD
Sbjct: 1085 SHYIRKWTKQVDFNEDTDIRDMLDWDYYLERFGSCIQKIITIPAALQGISNPVPRVPHPD 1144

Query: 1133 WLYKKVREKEDKFRQRKLVDIFSSLKKDDFLNKTCNAETNLMDENVEDLEDFPKKRRNSV 1192
            WL  K+R K D  RQ ++  IF++ +K               D++V           +++
Sbjct: 1145 WLQNKIRNKFDAHRQPRINQIFAACQKPSTSQMDNGKRRRTPDDDVAS--------EDAM 1196

Query: 1193 NGPRPIVRCFEVNNEQKTVKTTDQVDSLRQQLEPSEVSDQQPSSQNAIDTENIDRIVDYK 1252
            +    I+   +  N  K  K T +V +    LE   + +                   + 
Sbjct: 1197 DSQDDIIIDDDKENGAKRQKNTKKVHTTEVVLEKKTLVEH-----------------GFD 1239

Query: 1253 GWLELKKRKWKDNLDRRKKQKLGSLRASHQANGVSESLGDMINHKEAQRRTGVGSYFRRQ 1312
             W+   K+KW+     RK Q       S + + V E++                   R  
Sbjct: 1240 EWMGFLKKKWRVQRKERKTQ------LSSKDSDVVEAI------------------VRGA 1275

Query: 1313 ETAMTRCHWQIIQLVPSSQSGVFLAWVVVEGIMVRIPITVPRLFYLNSKDPIVEKFPGRR 1372
              A     W I+ + P++ +  F  W+ V+G M ++ + + R   ++S+ P  ++   RR
Sbjct: 1276 REAEHDKEWHILSVEPTADASFFNVWLAVQGQMHKVIMKIGRRIIVDSRAPRGDRDTIRR 1335

Query: 1373 VNKTLPHGRRSFNLIEVMIDEDQFRKESKKL 1403
            +   LPH +    L E   DE+Q      KL
Sbjct: 1336 I---LPHHKTPGFLYEFRTDENQLTALMDKL 1363



 Score =  148 bits (373), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 132/575 (22%), Positives = 248/575 (43%), Gaps = 79/575 (13%)

Query: 1441 SLARYAHILWISDDGVPDLGGTSEEDECFADE-----VHQPVLTYPGAYRKVS-VELKIH 1494
            +L +  H LW +    PDLGG   +D   + +     +   VL     + + + VEL++ 
Sbjct: 1620 NLQKSGHALWATRASRPDLGGKEMDDVRLSVDWNPLSIDDTVLLNRETFCETACVELQLS 1679

Query: 1495 HLSVNALLKSNQVNEMEGGG-LFGFD-------QDMNSGPYNNELCGFDETTSSAPAFRV 1546
             ++V AL++ ++V E EG   +  FD       Q +  G  N+  C +DE  +     +V
Sbjct: 1680 AVAVTALVQRSRVLEAEGADDVVTFDSMNTIAQQSVTGGAVNSIAC-YDEGAAVDATIKV 1738

Query: 1547 VKQLIQRCLTDAVTSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLA 1606
            +KQ++  C+      GN  AD ++  + RWL +  + L D  L R +  +  K+  +L A
Sbjct: 1739 LKQMLTECVRHIAHQGNARADEVVMTVSRWLNTRSALLFDAALTRSVSVLESKLVLLLCA 1798

Query: 1607 EFRKLGATIIFANFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSL 1666
            E  ++GA +I A   K++++TGK     AK + + L+++L T  +F  + + PV F+ ++
Sbjct: 1799 ECERIGAKVIHATAQKLVLNTGKSTSEEAKGFAEMLIQSLSTNVVFAALHITPVKFFDAM 1858

Query: 1667 LFMDQYNYGGIPAR----------ADESLDDDSQVDIVSSWNIAEYLPKE--IQDHFVLV 1714
            L+MD +N+ GI             ADE     ++ +  + W IAE +P E  IQ+ F+ +
Sbjct: 1859 LWMDAHNHTGIRISEKTESSPDVIADEEESSCTEFETTAIWKIAEEMPTEANIQEEFLQM 1918

Query: 1715 VSEFMYIPWKHAQKLAASRASLQEGSSCTPSITVAAAENFESHIVQYVKGE-ISSYFTGK 1773
            +  ++    +  +K+                       +F+S      + + IS   + +
Sbjct: 1919 IGAYILEFLETNRKM-----------------------HFDSESGATFRSDCISQKISHR 1955

Query: 1774 LLSIVRDAIHHMKKMNNDQHNSPGVMQTAANIHKVDAPLEFIKHVCAAFALDQNVQHDVL 1833
            L  IV   +H+    N D  +    +  A               +C A + DQ  Q  V 
Sbjct: 1956 LYRIVNKMVHN----NADIAHCSVYLANA---------------LCRALSCDQTSQLAVE 1996

Query: 1834 VMRKNLLKYVRVREFAPEAEFRD-PCPSFILPNVICSYCNDCRDLDLCRDMALLAQDWHC 1892
             +R N  + +       EA+       +  + NV C+ C+   ++ L     +L     C
Sbjct: 1997 GIRDNAKRLLH--NSVVEADMTPLRSTTLFVSNVFCNSCSQASNVFLSSTDEILT----C 2050

Query: 1893 AMPQCGQPYDREVMENALLQIVRQRERLYHLQDLVCIRCNQVKAAHLAEQCACAGSFRCK 1952
            A   C    + +V++  +   + Q    Y +QD  C +C  V+   L+  C C   F  +
Sbjct: 2051 AT--CQSKLNSDVIDMMICDRLNQLLTAYQIQDHQCTKCKSVRHDTLSMYCECCSQFIPQ 2108

Query: 1953 EDASDFRSKMQIFLNIANRQGFQLLQECTSWILEV 1987
               +  + +      ++  + F L  E  +W+L++
Sbjct: 2109 ITPAQLKHEASTVETVSIVRNFALSSELATWVLKM 2143


>gi|223998724|ref|XP_002289035.1| DNA polymerase [Thalassiosira pseudonana CCMP1335]
 gi|220976143|gb|EED94471.1| DNA polymerase [Thalassiosira pseudonana CCMP1335]
          Length = 2154

 Score = 1208 bits (3125), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 651/1350 (48%), Positives = 862/1350 (63%), Gaps = 113/1350 (8%)

Query: 104  LRRRYESQ-IADIEILEKEDLDLKNHLSGLH------KSYLKISFDTVQQLMDVKKDLLH 156
            L R Y+ + +  +E+L K DLD  NHL G+       +  +K+ FD V QL  VKK+++ 
Sbjct: 5    LLRLYQPKGLNRVELLRKMDLDAPNHL-GIRSQQLGGRPIIKLIFDNVDQLQRVKKEVMD 63

Query: 157  VVERNQAK----------------FDAAEAYESIL---TGKREQRPQDFLDCIVDLREYD 197
            V+++N+A+                +DA  ++++     T     +  D L  ++D+RE+D
Sbjct: 64   VLKKNEARRKDQGDEFQFSGSFATYDATYSHDNNNNDDTAAITAQKGDPLASLLDIREHD 123

Query: 198  VPYHIRFAIDNDVRCGQWYDVSISSTGPLLEKRVDLLQRAEVHVCAFDIETTKLPLKFPD 257
            VPY +R  ID  +R G WY ++   +G +     + LQ+A   V AFDIE TK PLKFPD
Sbjct: 124  VPYLVRVCIDLSLRAGCWYTLTPLQSGGVSLSDPNNLQKANPTVLAFDIECTKAPLKFPD 183

Query: 258  ADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNVNNEIELLRLW 317
            A+ D I MISYM++GQGYL+++R  VG+D+ + EYTPKP++ G F V N   E  L+R +
Sbjct: 184  ANVDSIFMISYMVNGQGYLLLSRHVVGKDVANFEYTPKPKYPGPFIVMNELTEEALIRRF 243

Query: 318  FAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGF-----------QCDKNQG 366
                Q   P I VTYNGD+FDWPFLE RAA +G  + +E+GF               N  
Sbjct: 244  LQEFQRHVPQIVVTYNGDFFDWPFLERRAAVYGLDLRKEIGFYNAAGSGGGGGGTMDNSS 303

Query: 367  ECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQMM 426
            E R + A HLD F WVKRDSYLPQGSQGLKAVTK KLGYDP+EV+PEDMVR+A+++P  M
Sbjct: 304  EYRGRTAVHLDAFCWVKRDSYLPQGSQGLKAVTKYKLGYDPVEVDPEDMVRYARDRPSHM 363

Query: 427  ASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVI 486
            ASYSVSDAVATYYLY  YVH FIFSL TIIPM P++VLRKGSGTLCE LLMV+A   ++I
Sbjct: 364  ASYSVSDAVATYYLYDKYVHMFIFSLCTIIPMGPEDVLRKGSGTLCEALLMVEACTKSII 423

Query: 487  CPNKHQSDPEKFY-RNHLLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQLLNNLD 545
            CPNK      KF  + +LLESETYIGG VECLE+GV+RSD+   F   P  ++ L++N+D
Sbjct: 424  CPNKQVDPIAKFTEKGNLLESETYIGGKVECLETGVYRSDIEYKFDTKPEGFQSLIDNVD 483

Query: 546  RDLQYAIKVEGKMDLESVSNYDEVKNAIMEKLLRLQEEPIREECPLIYHLDVAAMYPNII 605
            RD+ +AI+VEG +D   ++NYDEV+  I+EKL  L++ P R E P +YH+DV AMYPNII
Sbjct: 484  RDMTFAIEVEGGIDRRKITNYDEVRAEIVEKLELLRDRPSRMETPYVYHIDVGAMYPNII 543

Query: 606  LTNRLQPPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYYHLKKQIESEFV 665
            LTNRLQP +IV D  C +CDFN+    C RK++WVWRG+     + +Y   K Q+  E  
Sbjct: 544  LTNRLQPSAIVDDATCASCDFNQIRNDCKRKMQWVWRGDYNPATKGEYDRTKDQLSRE-- 601

Query: 666  DGTNGHLSKSFLDLPKMEQQSRLKDRLKKYCQKAYKRVLDKPVTE--LREAGICMRENSF 723
             G NG   +SF DL + EQ   + DRLK Y + AYK+     VTE   R   +CMREN F
Sbjct: 602  TGVNGE-GQSFNDLDEREQAKAVSDRLKLYSKNAYKKT---KVTEEITRTDTVCMRENDF 657

Query: 724  YVDTVRSFRDRRYEYKGLNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHKCILN 783
            YVDTVR FRDRRYEYK L KVW  K+  A         ++A+D  ++YDSLQ+AHKCILN
Sbjct: 658  YVDTVRQFRDRRYEYKKLTKVWGKKIGSATTPQQK---RQAEDTALVYDSLQVAHKCILN 714

Query: 784  SFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLPGSFP 843
            SFYGYVMRKGARW SMEMAG+VT TGA +I  AR LIE+IG+PLELDTDGIWC+LPGSFP
Sbjct: 715  SFYGYVMRKGARWRSMEMAGIVTKTGADLIVQARKLIEQIGRPLELDTDGIWCILPGSFP 774

Query: 844  ENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEFEVD 903
              FTFK  D      + YPC+MLN DV  N TN QYQTL DP++KTYE  SECSI FE+D
Sbjct: 775  NIFTFKLDD-GSTFRLEYPCIMLNADVHDNFTNHQYQTLKDPITKTYEAKSECSIFFELD 833

Query: 904  GPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFL 963
            GPY+ M+LPAS EEG L+KKRYAVFN DG+LAELKGFE+KRRGEL+LIK FQA++F++FL
Sbjct: 834  GPYRCMVLPASTEEGKLLKKRYAVFNFDGSLAELKGFELKRRGELELIKTFQAQVFERFL 893

Query: 964  HGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLADYGEQKSCAV 1023
             GS++ +CY++VA +AN W+D+LD +G+ +   EL+D ISE+  MS+ L DYG+QK  + 
Sbjct: 894  DGSSLVDCYTSVAEIANHWIDILDTRGESLDTDELVDLISENRNMSRQLDDYGDQKGTSQ 953

Query: 1024 TTARRLSDFLGDTMVKDKGLRCQYIVACEPQGTPVSERAVPVAIFETDAEIMKFYLRKWC 1083
            TTARRL +FLG  ++KDKGL C++I++  P G PV++RAVP AI++ +  +MK YLRKW 
Sbjct: 954  TTARRLGEFLGAEIIKDKGLNCKFIISQLPHGAPVTDRAVPTAIWKAEPAVMKHYLRKWL 1013

Query: 1084 KT----SSDVGIRSIVDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLYKKVR 1139
            K       D  IR+++DW YY +RL++ I+KIITIPAA+QKV NPVPRV HPDWL   VR
Sbjct: 1014 KAPEMEGDDFDIRNVLDWDYYIERLNNTIRKIITIPAALQKVPNPVPRVPHPDWLQTTVR 1073

Query: 1140 EKEDKFRQRKLVDIFS---SLKKDDFLNKTCNAETNLMDENVEDLEDFPKKRRNSVNGPR 1196
            +  D+++Q+ +  +F    ++  D   ++  NA+       V D+EDF  K   SV   R
Sbjct: 1074 KMNDRYKQKYITSMFGGKKAIATDIESSQKGNAK-------VLDIEDFQSK---SVGPGR 1123

Query: 1197 PIVRCFEVNNEQKTVKTTDQVDSLRQQLEPSEVSDQQPSSQNAI--DTENIDRIVDYKGW 1254
            PIV                   S RQ+  P+  + +   ++  I    EN+        W
Sbjct: 1124 PIVHS-----------------SRRQRKSPTSATAEGGIAEARIKLTKENL------PAW 1160

Query: 1255 LELKKRKWKDNLDRRKKQKLGSLRASHQANGVSESLGDMINHKEAQRRTGVGSYFRRQET 1314
            L+ KK  W++    R+K+ + S R         + L    + K+      +  Y R    
Sbjct: 1161 LKKKKELWRNQRKERRKRAVASER---------DQLAPDASKKQKIALGSMEGYMRSAAE 1211

Query: 1315 AMTRCHWQIIQL------VPSSQSGVFLAWVVV-EGIMVRIPITVPRLFYLNSKDPIVEK 1367
            A+T   WQ+I++        SS  G FL WV+V    + RI I + R   ++S+  + + 
Sbjct: 1212 ALTHHEWQVIEVRELASSDGSSSDGTFLLWVMVGNKSLQRIRIKLNRTVIVDSRVELQQG 1271

Query: 1368 FPG----RRVNKTLPHGRRSFNLIEVMIDE 1393
              G    +RV K LPH + S  L EV + E
Sbjct: 1272 LIGALLVKRVEKHLPHNKSSGILYEVSMPE 1301



 Score =  246 bits (627), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 171/600 (28%), Positives = 295/600 (49%), Gaps = 71/600 (11%)

Query: 1441 SLARYAHILWISD-DGVPDLGGTS------EEDECFADE--VHQPVLTYPGAYRKVSVEL 1491
            +L +   +LW SD    PD+GG          ++ + D+  +  PV+  PGAYR V VE+
Sbjct: 1567 NLNKSRAVLWASDMPNNPDVGGFRHVETDLNNNDIWGDDDALVSPVILRPGAYRCVCVEI 1626

Query: 1492 KIHHLSVNALLKSNQVN--------EMEGGGLFGFDQDM------NSGPYNNELCGFDET 1537
             ++ LS+ AL  S+  +          + G LF  + ++      +S P  +E+      
Sbjct: 1627 DVYDLSIAALTDSSLASLPGASLPTSNQTGALFDTETNIPNQVISSSNPLGDEM------ 1680

Query: 1538 TSSAPAFRVVKQLIQRCLTDAVTSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVM 1597
             S+A +  +++ L+   L DA  + +  AD +L  +YR + SP + L+DP LHR++H +M
Sbjct: 1681 -STAISLPILRSLVNSWLRDAYQTNSQTADDLLHDVYRLISSPDALLNDPALHRVVHSLM 1739

Query: 1598 QKVFAMLLAEFRKLGATIIFANFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIEL 1657
            + +F  LL E ++LG+TII A+F KV+I T K  +  AK Y + ++  +  R     + L
Sbjct: 1740 KTIFLRLLGELQRLGSTIISADFHKVVIATNKSQIYDAKEYVEFVISTVLKRAGLARVSL 1799

Query: 1658 EPVHFWHSLLFMDQYNYGGIPARADESLDD---------DSQVD----------IVSSWN 1698
             P +F+   LF+DQ N+GGI     E  DD         +S V+          +V  WN
Sbjct: 1800 RPNNFYTHYLFLDQNNFGGIHFEQREIEDDEENEMTQLFNSVVEEDGSSSIVPTVVCGWN 1859

Query: 1699 IAEYLPKEI-QDHFVLVVSEFMYIPWKHAQKLAASRASLQEGSSCTPSITVAAAENFES- 1756
            I +YL  +I QD+F  ++  F    ++  Q L   +   +  S    S+T +  E+ E+ 
Sbjct: 1860 IMQYLANDIAQDYFRTIIGRFSKDVFRK-QLLIEHKEKSKISSISPISVTKSNDEDDENS 1918

Query: 1757 -------HIVQYVKGEISSYFTGKLLSIVRDAIHHMKKMNNDQHNSPGVMQTAANIHKVD 1809
                    ++ Y K  IS +F   L  +V + I           + P +    + +H  +
Sbjct: 1919 SFLSPQEQLLNYKKKMISKHFANYLTRVVGELIDD----GGGAESFPKL--PGSYLHLSN 1972

Query: 1810 APLEFIKHVCAAFALDQNVQHDVLVMRKNLLKYVRVREFAPEAEFRDPCPSFILPNVICS 1869
              LEF+K+V     LD +V+ +V+ ++K+L   + V+E++   ++++P  +F+LP+V C 
Sbjct: 1973 PALEFVKNVLVVLNLDPDVKQEVIYLKKSLFAQIGVQEYSAVTQWKNPAAAFVLPDVYCM 2032

Query: 1870 YCNDCRDLDLC----RDMALLAQDWHCAMPQCGQPYDREVMENALLQIVRQRERLYHLQD 1925
             C++CRD+DLC     D     + W C    C  PY+ + ME  L+ IV+++   Y LQD
Sbjct: 2033 ECHECRDVDLCVMPPDDDESTVKQWLCD--GCASPYNVDQMERRLVDIVQKKCIRYQLQD 2090

Query: 1926 LVCIRCNQVKAAHLAEQCACAGSFRCKEDASDFRSKMQIFLNIANRQGFQLLQECTSWIL 1985
            L C +  QV    ++    C+ + +     S+F  ++ I  N+A+  G   L E    +L
Sbjct: 2091 LRCTKTQQVAVRSMSRTSDCSAALKLDIPRSEFLGQITILRNLADFYGLDWLLETVDGVL 2150


>gi|324500002|gb|ADY40015.1| DNA polymerase epsilon catalytic subunit A, partial [Ascaris suum]
          Length = 2143

 Score = 1207 bits (3124), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 643/1419 (45%), Positives = 891/1419 (62%), Gaps = 90/1419 (6%)

Query: 23   AEEELEAKLGYDLFSEGDKRLGWLLTFASSSLEDEDTRKVYSCIDLYFVSQDGSTFKSKY 82
            A E +++K GY  ++E + R  WL+    S + +E ++ + S  D YF+ +DG  FK  Y
Sbjct: 23   ATEAIDSKFGYHRYTECEIRNAWLINVQPSEMVEEQSKVIISVCDFYFIEEDGQRFKISY 82

Query: 83   KFRPYFYAATKEKMEMDVEAYLRRRYESQIADIEILEKEDLDLKNHLSGLHKSYLKISFD 142
             FRPY Y  T    E  V +YL ++Y + I   E++EKEDLDLKNHL+GL +++LKI+F 
Sbjct: 83   PFRPYLYLGTLPSYEHQVSSYLLKKY-AGIITTEVVEKEDLDLKNHLAGLKRTFLKITFP 141

Query: 143  TVQQLMDVKKDLLHVVERNQAKFDAAEAYESILT-----GKREQRPQDFLDCIVDLREYD 197
            ++ +L   K+D+   + +NQ +   + +Y ++L+      K      + ++ ++D+RE+D
Sbjct: 142  SMSELQKFKRDVSGTIRKNQEREKNSTSYTTLLSRHLGSDKISADDGEVMENVIDIREHD 201

Query: 198  VPYHIRFAIDNDVRCGQWYDVSISSTG--PLLEKRVDLLQRAEVHVCAFDIETTKLPLKF 255
            VPY +R  ID  +  G WY+V        P +     L+ + +  V A+DIE TKLPLKF
Sbjct: 202  VPYEMRVCIDEKIFVGLWYEVVGRDVNRRPSMRPHPTLIDQPDPVVLAYDIEVTKLPLKF 261

Query: 256  PDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNVNNEIELLR 315
            PD+ +D IMMISYM+D +G+LI+NR+ V +++ED EYTP+PE++G F++ N+ NE   ++
Sbjct: 262  PDSTFDEIMMISYMIDARGFLIVNRQIVADNVEDFEYTPRPEYKGRFEIFNMENEAATIK 321

Query: 316  LWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDKNQGECRAKFACH 375
             +F H+  V+P I+VTYNGD FDWPF+E RAA HGF M  E+GF  D + GE ++  A H
Sbjct: 322  CFFDHIIRVRPSIFVTYNGDSFDWPFVEARAAMHGFDMRAEIGFAKD-SAGEYKSTNAVH 380

Query: 376  LDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQMMASYSVSDAV 435
            +D F WVKRDSYLP GSQ LKA TKAKL YDPLE++PE M   A+E+PQ +A+YSVSDAV
Sbjct: 381  MDAFKWVKRDSYLPVGSQNLKACTKAKLRYDPLELDPEQMCAMAREQPQTLANYSVSDAV 440

Query: 436  ATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVICPNKH-QSD 494
            ATYYLYM YVHPFIF+L TIIP+ PD VLRKGSGTLCE LLMV+A+  N+I PNK  Q+ 
Sbjct: 441  ATYYLYMKYVHPFIFALCTIIPLGPDNVLRKGSGTLCEALLMVEAFHNNIIFPNKQVQTS 500

Query: 495  PEKFYRNHLLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQLLNNLDRDLQYAIKV 554
             +     H++ESETY+GGHVE LESGVFR+DLP  F++ PSA   L  N+ + L+ A+ +
Sbjct: 501  NKHTADGHVIESETYVGGHVEALESGVFRADLPERFRIVPSAILMLQANVKKTLKDALTL 560

Query: 555  EGKMDLESVSNYDEVKNAIMEKLLRLQEEPIREECPLIYHLDVAAMYPNIILTNRLQPPS 614
            E  + ++ V+++D +   I++++      P+R E P IYHLDV AMYPNIILTNRLQPP+
Sbjct: 561  ELGVKMDEVTDFDAICEEIVQQMEDFIRRPMRIENPKIYHLDVGAMYPNIILTNRLQPPA 620

Query: 615  IVTDEVCTACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYYHLKKQIESEFVDGTNGHLSK 674
            +VT+E C AC +N     C R + W WRGEI    + +Y  + +Q+E+E      G   K
Sbjct: 621  VVTEEDCIACIYNTADAKCKRTMRWEWRGEIMPATKGEYERILQQLENE----KFGKPPK 676

Query: 675  SFLDLPKMEQQSRLKDRLKKYCQKAYKRVLDKPVTELREAGICMRENSFYVDTVRSFRDR 734
             F  L + E+    + R++ +C++AY R       E R+  IC REN FYVDTV++FRDR
Sbjct: 677  PFHGLSRDERILIERKRVQDFCKRAYGRT-HITRNEYRDTTICQRENGFYVDTVKAFRDR 735

Query: 735  RYEYKGLNKVWKGKLSEAKASG-NSIKIQEAQDMVVLYDSLQLAHKCILNSFYGYVMRKG 793
            RY+YK L K  K  LSE      N++K   AQ  VVLY+SLQLAHKCILNSFYGYVMRKG
Sbjct: 736  RYQYKALLKKAKLALSEVPEDDINALK--SAQGRVVLYESLQLAHKCILNSFYGYVMRKG 793

Query: 794  ARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLPGSFPENFTFKTKDL 853
            +RW+SMEMAG+V +TGA II  AR L+E+IGKPLELDTDGIWC++P SFPEN TF  ++ 
Sbjct: 794  SRWFSMEMAGIVCHTGANIITEARKLVEQIGKPLELDTDGIWCLIPASFPENITFTLRNP 853

Query: 854  KKK-LTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEFEVDGPYKAMILP 912
            KKK +T+SYP  MLN  V    TN+QY +   P   TY+  SE SI FEVDGPY AMILP
Sbjct: 854  KKKSVTVSYPGAMLNALVRDRFTNEQYHSF-QP-DGTYKVTSENSIFFEVDGPYLAMILP 911

Query: 913  ASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFLHGSTIEECY 972
            ASKEEG  +KKRYAVFN DG+LAELKGFE+KRRGEL +IK FQ  +F  FL G    E Y
Sbjct: 912  ASKEEGKKLKKRYAVFNFDGSLAELKGFEVKRRGELAMIKYFQTCVFKAFLKGKNHYEAY 971

Query: 973  SAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLADYGEQKSCAVTTARRLSDF 1032
              VA  A+ WLD+L ++G D++DSE+ D ISE+ +MSK L DYG QKS +++TA+RL++F
Sbjct: 972  QNVAREADYWLDVLFSKGADLSDSEVFDLISENRSMSKKLDDYGSQKSTSISTAKRLAEF 1031

Query: 1033 LGDTMVKDKGLRCQYIVACEPQGTPVSERAVPVAIFETDAEIMKFYLRKWCK----TSSD 1088
            LGD +VKD GL C++I++ +P G PV+ERA+P+AIF+    +   +LRKW +    T  +
Sbjct: 1032 LGDDVVKDAGLACRFIISRKPIGAPVTERAIPLAIFQATPAVAAHFLRKWTRDSEITKDN 1091

Query: 1089 VGIRSIVDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLYKKVREKEDKFRQR 1148
            + IR I+DW YY +R+   IQKIITIPAA+Q V NPVPR+  P+WL  + R++    +Q 
Sbjct: 1092 IDIRKIIDWDYYIERVGGTIQKIITIPAALQNVPNPVPRIPFPEWLESRRRQRASDHKQP 1151

Query: 1149 KLVDIFSSLKKD--------------DFLNKTCNAETNLMDENVEDLEDFPKKRRNSVNG 1194
            K+ D+F  +  +                LN+T     N + ++   L    + R + V G
Sbjct: 1152 KITDVFKPISNNIIESQFDVEDICEGSALNRTTETADNSICDDTVTLRK--RARDDEVEG 1209

Query: 1195 PRPIVRCFEVNNEQKTVKTTDQVDSLRQQLEPSEVSDQQPSSQNAIDTENIDRIVDYKGW 1254
                       NEQ+      Q+   R        +++ P  +  I  + +        W
Sbjct: 1210 ------IASSENEQR------QLKHFR--------TEELPVERKTITGDGV------VAW 1243

Query: 1255 LELKKRKWKDNLDRRKKQKLGSLRASHQANGVSESLGDMINHKEAQRRTGVGSYFRRQET 1314
            +   K +WK    + K++K+    +S   N    +L  M+   E+ RRT           
Sbjct: 1244 IRYLKARWK--WQKEKQRKVMFTPSSRGLN----ALQSMV---ESNRRT----------- 1283

Query: 1315 AMTRCHWQIIQLVPSSQSGVFLAWVVVEGIMVRIPITVPRLFYLNSKDPIVEKFPGRRVN 1374
             M   +WQ++QL  S   G+   WV+V G M+R+ + VPR+FY+N ++    +  G  V 
Sbjct: 1284 -MRETYWQLLQLSESLSRGILTMWVIVNGRMLRMNLHVPRIFYVNDRES--NEAQGTLVK 1340

Query: 1375 KTLPHGRRSFNLIEVMIDEDQFRKESKKLAALLADPEVE 1413
            KTLP  +   NL    +DE +F+     L   L    VE
Sbjct: 1341 KTLPRMKPVINLYRYSVDESRFQSSLNVLNRELCAMRVE 1379



 Score =  212 bits (540), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 144/565 (25%), Positives = 271/565 (47%), Gaps = 68/565 (12%)

Query: 1441 SLARYAHILWISDDGVPDLGGTSEEDEC---------FADEVHQPVLTYPGAYRKVSVEL 1491
            +L RY ++LW S    PDLGG  E D+C            E    ++ +     +V VEL
Sbjct: 1624 NLCRYGYVLWASPTRRPDLGG-KELDDCRIGVDWNSLCVSEQPAAIVNHSRLCTEVCVEL 1682

Query: 1492 KIHHLSVNALLKSNQVNEMEGG-GLFGFDQDMNSGPYNNE--------LCGFDETTSSAP 1542
            ++  L+V+AL+   ++ E EGG G  GF   ++S   + +        +  +DE  + + 
Sbjct: 1683 ELGALAVSALVHGARIAEAEGGSGSVGF---LSSASLSADALFGRVRTIAHYDEAAAVSG 1739

Query: 1543 AFRVVKQLIQRCLTDAVTSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFA 1602
            A +V++ ++Q C+ D   + N  AD ++ ++YRW+ +P + L++P + R    ++ K+  
Sbjct: 1740 ALKVLRLMLQDCVKDIHANSNPIADQLIVNIYRWIHTPRAFLYEPAIARAADMLVTKLCL 1799

Query: 1603 MLLAEFRKLGATIIFANFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHF 1662
            +L+AE  ++G  ++ A+  ++I+ T +  +  A+A+ ++L+  L+   LF  + + P+++
Sbjct: 1800 LLVAEINRMGGEVLHASQLRLIVCTKRGSMQLAQAFVNTLISTLRQNPLFAALYIAPLNY 1859

Query: 1663 WHSLLFMDQYNYGGIPARADESLDDDSQVD-IVSSWNIAEYLPK--EIQDHFVLVVSEFM 1719
            W+ LL+M+  NY GI         +DS+ D + S  +I   LP+    ++ F  ++  ++
Sbjct: 1860 WNVLLWMNTQNYVGI------KFGEDSEEDHVTSKLSIGNLLPEAAACKETFAQIIVGYI 1913

Query: 1720 YIPWKHAQKLAASRASLQEGSSCTPSITVAAAENFESHIVQYVKGEISSYFTGKLLSIVR 1779
             +    A+   +S +                       +++Y +  I +  + +L  ++ 
Sbjct: 1914 SMIGAKAKSEVSSES-----------------------LMRYREELIENELSERLFCVIS 1950

Query: 1780 DAIHHMKKMNNDQHNSPGVMQTAANIHKVDAPLEFIKHVCAAFALDQNVQHDVLVMRKNL 1839
                + + ++  +  S     +   +H  +APL+  K +    ALD  +   +  +R  L
Sbjct: 1951 KLAAYKEDISMPERTS-----SREPLH--NAPLQLAKCIIHFLALDAPLAQAIDKLRSQL 2003

Query: 1840 LKYVRVREFAPEAEFRDPCPSFILPNVICSYCNDCRDLDLCRDMALLAQDWHCAMPQCGQ 1899
            L+ +   E A EA +R  C    L  V C  CN   DLD C++ A     W+C    C +
Sbjct: 2004 LRLLGYGESAEEAVWRPMCVCCTLSQVFCEACNQFSDLDACQEDA-----WNCV--SCRK 2056

Query: 1900 PYDREVMENALLQIVRQRERLYHLQDLVCIRCNQVKAAHLAEQCACAGSFRCKEDASDFR 1959
            P   + +E  L++ V Q    Y LQD  C++C  ++   LA  C C+G F      S+FR
Sbjct: 2057 PLLTDAIERLLVERVNQLLIAYSLQDFKCVKCGSIRKDSLARSCECSGRFEGLVPESEFR 2116

Query: 1960 SKMQIFLNIANRQGFQLLQECTSWI 1984
              M++F  I  R+G  LL E   W+
Sbjct: 2117 FNMRVFARIGARRGLTLLSEACEWM 2141


>gi|308490432|ref|XP_003107408.1| hypothetical protein CRE_13961 [Caenorhabditis remanei]
 gi|308251776|gb|EFO95728.1| hypothetical protein CRE_13961 [Caenorhabditis remanei]
          Length = 2200

 Score = 1201 bits (3108), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 656/1441 (45%), Positives = 883/1441 (61%), Gaps = 117/1441 (8%)

Query: 10   DGRRTKKQKLIRSAEEELEAKLGYDLFSEGDKRLGWLLTFASSSLEDEDTRKVYSCIDLY 69
            D    ++  LI+S  + ++AKLG+  ++   ++ G+L+    S L DE T+ + S +D +
Sbjct: 28   DSNYKERLALIKS-NDSIDAKLGFVRYTGIQEKKGFLINIQPSELVDEQTKIIVSVVDYF 86

Query: 70   FVSQDGSTFKSKYKFRPYFYAATKEKMEMDVEAYLRRRYESQIADIEILEKEDLDLKNHL 129
            F+S     FK  Y FRPYFY AT +  E  V +YL ++Y +Q A +E ++KEDLDLK+HL
Sbjct: 87   FISDMDERFKISYPFRPYFYIATLDGFEFQVSSYLSKKYGAQTA-VEHMDKEDLDLKDHL 145

Query: 130  SGLHKSYLKISFDTVQQLMDVKKDLLHVVERNQAKFDAAEAYESIL-----------TGK 178
            SG+ K+Y+K+SF +  +LM V+KDL+ +V +N  +     AY   L           +G 
Sbjct: 146  SGIKKTYIKLSFASTVELMKVRKDLMPLVRKNTDRIKKESAYADYLAKNLGGKGCGASGS 205

Query: 179  REQRPQDFLDCIVDLREYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLLEKRVDLLQR-- 236
             +    D L+ IVD+REYDVP+H+R +ID  +  G WYDV     GP    RV  ++R  
Sbjct: 206  VDLIDGDILNQIVDIREYDVPFHMRVSIDEKIFVGLWYDVK--GVGP---NRVPTIKRKD 260

Query: 237  -----AEVHVCAFDIETTKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLE 291
                 A+  V AFDIETTKLPLKFPD + D IMMISYM+DG+G+LIINRE V  DI   E
Sbjct: 261  LAFFHAKPKVLAFDIETTKLPLKFPDRESDEIMMISYMVDGRGFLIINREIVSADINAFE 320

Query: 292  YTPKPEFEGYFKVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGF 351
            YTPK E++G F V N  +E  L+R +F H  +V+P I VTYNGD+FDWPF+E RA   GF
Sbjct: 321  YTPKAEYKGEFTVWNEKDETALIRKFFDHFLQVRPNIVVTYNGDFFDWPFVEARAKIRGF 380

Query: 352  KMSEELGFQCDKNQGECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVN 411
             M  E+GF  D +  E +++   H+D F WVKRDSYLP GSQ LKAVTKAKL YDP+EV 
Sbjct: 381  NMEREIGFSKD-SADEYKSRNCIHMDAFRWVKRDSYLPVGSQNLKAVTKAKLRYDPVEVE 439

Query: 412  PEDMVRFAKEKPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTL 471
            PE M + A+E+PQ +A+YSVSDAV+TYYLYM YVH FIF+L TIIP+  D+VLRKGSGTL
Sbjct: 440  PELMCKMAREQPQQLANYSVSDAVSTYYLYMKYVHQFIFALCTIIPLGADDVLRKGSGTL 499

Query: 472  CEMLLMVQAYKANVICPNKHQSDPE-KFYR-NHLLESETYIGGHVECLESGVFRSDLPTS 529
            CE LLMV+A+  N++ PNK+    E KF +  H +ESETY+GGHVE LE+GVFR+D+P  
Sbjct: 500  CEALLMVEAFHNNIVFPNKYTGPEETKFSKEGHRVESETYVGGHVEALEAGVFRADIPAR 559

Query: 530  FKLDPSAYEQLLNNLDRDLQYAIKVEGKMDLESVSNYDEVKNAIMEKLLRLQEEPIREEC 589
            F+L   A EQL +     L+  +  E ++ L+ V +++E  + + E    L E P R E 
Sbjct: 560  FRLAVPALEQLKSEAKETLRKELAREFEVTLDQVIDFEEQCSEVEEAFNGLIEVPTRLEN 619

Query: 590  PLIYHLDVAAMYPNIILTNRLQPPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEIFMGK 649
            P IYHLDV AMYPNIILTNRLQP ++V +E+C  C FN+P   C R + W WRGE+    
Sbjct: 620  PRIYHLDVGAMYPNIILTNRLQPCAMVNEEICMGCSFNKPDAECKRTMAWEWRGELLPAS 679

Query: 650  RSDYYHLKKQIESEFVDGTNGHLSKSFLDLPKMEQQSRLKDRLKKYCQKAYKRV-LDKPV 708
            R +Y  + +Q+E+E    + G   K F  L + E+++    R+K YC++ Y +  L K  
Sbjct: 680  RGEYQQIMQQLEAE----SFGKPPKHFHMLERSEREAIEMKRVKDYCRRVYGKTHLTK-- 733

Query: 709  TELREAGICMRENSFYVDTVRSFRDRRYEYKGLNKVWKGKLSEAKASGNSIKIQEAQDMV 768
             E+RE  IC REN FYV+TV++FRDRRYEYK + K  KG+  +A+AS +   +  A+  +
Sbjct: 734  NEMRETTICQRENHFYVETVKAFRDRRYEYKDMLKKAKGRFDQAQASNDLATVATAKLEM 793

Query: 769  VLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLE 828
            VLY+SLQLAHKCILNSFYGYVMRKG+RWYSMEMAG+V +TGA II+ A  L+++IGKPLE
Sbjct: 794  VLYESLQLAHKCILNSFYGYVMRKGSRWYSMEMAGIVCHTGANIIKEATKLVDQIGKPLE 853

Query: 829  LDTDGIWCVLPGSFPENFTFKTKDLKK----------------KLTISYPCVMLNVDVAR 872
            LDTDGIWC++P SFPEN TFK K+ K+                KL   +P  MLN  V  
Sbjct: 854  LDTDGIWCLIPASFPENVTFKLKNHKRNSVTVSYPGRLKTSRNKLIFFFPGAMLNALVYE 913

Query: 873  NNTNDQYQTLVDPVSKTYETHSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDG 932
              TN QY TL    S  Y   SE SI FEVDGPY+ M+LPASKEEG  +KKRYAVFN DG
Sbjct: 914  GFTNHQYHTLEKDGS--YLKSSENSIYFEVDGPYQCMVLPASKEEGKKLKKRYAVFNLDG 971

Query: 933  TLAELKGFEIKRRGELKLIKVFQAELFDKFLHGSTIEECYSAVAAVANRWLDLLDNQGKD 992
            ++AE+KGFE+KRRGEL +IK FQ+ +F  FL G T+EE Y AVA  AN WLD+L   G D
Sbjct: 972  SMAEMKGFELKRRGELNIIKHFQSHVFKTFLVGKTLEETYKAVAGDANHWLDILHTHGAD 1031

Query: 993  IADSELIDYISESSTMSKSLADYGEQKSCAVTTARRLSDFLGDTMVKDKGLRCQYIVACE 1052
            I D EL D ISE+ +MS+ L +YG QKS +++TA+RL++FLGD MVKD GL C +I++  
Sbjct: 1032 ITDDELFDLISENRSMSRKLEEYGSQKSTSISTAKRLAEFLGDDMVKDAGLACMFIISRH 1091

Query: 1053 PQGTPVSERAVPVAIFETDAEIMKFYLRKWCKTS---SDVGIRSIVDWSYYKQRLSSAIQ 1109
            P G+PV++RA+PVAIF+ + ++   Y+RKW K S    D  IR ++DW YY +R  S IQ
Sbjct: 1092 PIGSPVTDRAIPVAIFKAEPKVRSHYIRKWTKQSDFDEDTDIRDMLDWDYYIERFGSCIQ 1151

Query: 1110 KIITIPAAMQKVSNPVPRVVHPDWLYKKVREKEDKFRQRKLVDIFSSLKKDDFLNKTCNA 1169
            KIITIPAA Q V NPVPRV HPDWL  K+R K D  +Q ++  IF++ +K          
Sbjct: 1152 KIITIPAAYQGVVNPVPRVPHPDWLQNKIRNKIDAHKQPRINQIFAACQKP--------- 1202

Query: 1170 ETNLMDENVEDLEDFPKKRRNSV-NGPRPIVRCFE----VNNEQKTVKTTDQVDSLRQQL 1224
                       LE+  ++R  S  N     V   E     N E K      Q  ++ +  
Sbjct: 1203 --------TTTLENGKRRRTPSCDNDDSDDVVAIEGSDFQNEEDKENGAKRQKSAVSKNP 1254

Query: 1225 EPSEVSDQQPSSQNAIDTENIDRIVDYKGWLELKKRKWKDNLDRRKKQKLGSLRASHQAN 1284
            +P E   + P  +  +     D       W+   K+KW+  + R++++ L   R S    
Sbjct: 1255 KPKEA--EAPLEKKTLIDHGFDE------WMGFLKKKWR--IQRKERKTLLKSRDSDT-- 1302

Query: 1285 GVSESLGDMINHKEAQRRTGVGSYFRRQETAMTRCHWQIIQLVPSSQSGVFLAWVVVEGI 1344
                                V S  R    A +   W I+ + P++ +  F  W+ V+G 
Sbjct: 1303 --------------------VESIVRGTREAESEREWHILSVEPTADTSFFNVWLSVQGQ 1342

Query: 1345 MVRIPITVPRLFYLNSKDPIVEKFPGRR--VNKTLPHGRRSFNLIEVMIDEDQFRKESKK 1402
            + ++ + + R   ++S+ P      G R  V +TLPH +    L E   DE Q      K
Sbjct: 1343 LQKVTMKIGRKILVDSRAP-----RGNRETVRRTLPHHKPPGFLYEFKTDEAQLTALMDK 1397

Query: 1403 L 1403
            L
Sbjct: 1398 L 1398



 Score =  145 bits (365), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 142/595 (23%), Positives = 247/595 (41%), Gaps = 99/595 (16%)

Query: 1442 LARYAHILWISDDGVPDLGGTSEEDECFADE-----VHQPVLTYPGAYRKVS-VELKIHH 1495
            L +  H LW +    PDLGG   +D   + +     V   VL     +   + VEL++  
Sbjct: 1655 LQKTGHALWATKASRPDLGGKELDDIRLSIDWNPLSVDDTVLLNREVFSDTACVELQLSA 1714

Query: 1496 LSVNALLKSNQVNEMEGGG-LFGFD-------QDMNSGPYNNELCGFDETTSSAPAFRVV 1547
            ++V AL++ ++V E EG   +  FD       Q +  G  N   C +DE  +   + +++
Sbjct: 1715 VAVTALVQRSRVLEAEGADDVVTFDSMNTIAQQSITGGTVNAIAC-YDEGAAVDASIKIL 1773

Query: 1548 KQLIQRCLTDAVTSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAE 1607
            KQ++  C+      GN  AD ++  + RWL +  + L D  L R +  +  K+  +L AE
Sbjct: 1774 KQMLTECVRHIAHQGNRHADEVVMTVSRWLNTRSALLFDSALTRSISVLESKLVLLLCAE 1833

Query: 1608 FRKLGATIIFANFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLL 1667
              ++GA +I A   K++++TGK     AK + + L+++L T  +F  + + PV F+ ++L
Sbjct: 1834 CERIGAKVIHATAQKLVLNTGKLTSEEAKGFVEMLIQSLSTNVVFAALHITPVKFFDAML 1893

Query: 1668 FMDQYNYGGI-------PARADESLD-------DDSQVDIVSSWNIAEYLPKEIQDHFVL 1713
            +MD +N+ GI       P  AD   D       D+ Q +  + W IAE +P E       
Sbjct: 1894 WMDAHNHTGIRISQNDEPESADIIDDSEPAESSDEPQYETTAIWKIAEEMPDESN----- 1948

Query: 1714 VVSEFMYIPWKHAQKLAASRASLQEGSSCTPSITVAAAENFESHIVQYVKGEISSYFTGK 1773
            +  EF+ +   +  +   +   +Q  S         +A  F +         IS   + +
Sbjct: 1949 IREEFLQMIGAYILEFLETNREMQFDSE--------SAATFRADT-------ISQKISHR 1993

Query: 1774 LLSIVRDAIHHMKKMNNDQHNSPGVMQTAANIHKVDAPLEFIKHVCAAFALDQNVQHDVL 1833
            L  +V   +H           S          + VD+       +C A + DQ  Q  V 
Sbjct: 1994 LYRVVNKLVH-----------SSAAESAHCATYLVDS-------LCRALSCDQTSQLAVE 2035

Query: 1834 VMRKN---LLKYVRVR-EFAPEAEFRDPCPSFILPNVICSYCNDCRDLDLCRDMALLAQD 1889
             +R+N   LL  V V  +  P    R    +  + NV C+ C+   ++ L     +L   
Sbjct: 2036 GVRENAKRLLHNVVVEVDMTP---LRST--TLFVSNVFCNSCSQASNVFLSSTNEILT-- 2088

Query: 1890 WHCAMPQCGQPYDREVMENALLQIVRQRERLYHLQDLVCIRCNQVKAA------------ 1937
              C    C    + +V++  +   + Q    Y +QD  C +C  V +A            
Sbjct: 2089 --CHT--CQSKLNSDVIDMMICDRLNQLLTAYQIQDHQCSKCKSVSSAPFVHLHANPLSL 2144

Query: 1938 -----HLAEQCACAGSFRCKEDASDFRSKMQIFLNIANRQGFQLLQECTSWILEV 1987
                  L+  C C   F  +   S  + +      +AN + F L  E  +WIL++
Sbjct: 2145 QVRHDSLSLYCECCSPFVPQITPSQLKHEAATVETVANVRNFALSSELATWILKM 2199


>gi|47226522|emb|CAG08538.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 1768

 Score = 1191 bits (3080), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 610/1170 (52%), Positives = 801/1170 (68%), Gaps = 124/1170 (10%)

Query: 64   SCIDLYFVSQDGSTFKSKYKFRPYFYAATKEKMEMDVEAYLRRRYESQIADIEILEKEDL 123
            S +D YF+ +DGS FK+                E +V +Y+ ++++ ++A ++I+ KEDL
Sbjct: 3    SAVDYYFIQEDGSRFKN---------------CEREVSSYVSKKFQGKVAKLDIVPKEDL 47

Query: 124  DLKNHLSGLHKSYLKISFDTVQQLMDVKKDLLHVVERNQAKFDAAEAYESILTGKRE--- 180
            DL NHL GL +SY+K+SF+TV  L+ VK+++   V +N+ +  + +AY S+L+       
Sbjct: 48   DLPNHLVGLKRSYIKLSFNTVDDLIKVKREITPAVRKNREREQSNDAYTSMLSSALSGGH 107

Query: 181  ----------QRPQDFLDCIVDLREYDVPYHIRFAIDNDVRCGQWYDVSI--SSTGPLLE 228
                      +   D L  IVD+REYDVPYH+R +ID  +    WY+V    S+  P + 
Sbjct: 108  VTSADDEGMLKNISDQLHNIVDMREYDVPYHVRLSIDLKIHVAHWYNVRYRGSAYPPEIV 167

Query: 229  KRVDLLQRAEVHVCAFDIETTKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIE 288
            +R DL++R +  V AFDIETTKLPLKFPDA+ D IMMISYM+DGQG+LI NRE V E+IE
Sbjct: 168  RRDDLVERPDPVVLAFDIETTKLPLKFPDAETDQIMMISYMIDGQGFLITNREIVSENIE 227

Query: 289  DLEYTPKPEFEGYFKVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAH 348
            D E+TPKPE+EG F V N ++E   L +   H+ ++                FL  R   
Sbjct: 228  DFEFTPKPEYEGPFTVFNEDDERFPLFMCIDHLSDI----------------FLHGR--- 268

Query: 349  HGFKMSEELGFQCDKNQGECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPL 408
                                            WVKRDSYLP GS  LKA  KAKLGYDP+
Sbjct: 269  --------------------------------WVKRDSYLPVGSHNLKAAAKAKLGYDPV 296

Query: 409  EVNPEDMVRFAKEKPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGS 468
            E++PE+M R A E+PQ +A+YSVSDAVATYYLYM YVHPFIF+L TIIPM PDEVLRKGS
Sbjct: 297  ELDPEEMCRMATEEPQTLATYSVSDAVATYYLYMKYVHPFIFALCTIIPMEPDEVLRKGS 356

Query: 469  GTLCEMLLMVQAYKANVICPNKHQSDPEKFYRN-HLLESETYIGGHVECLESGVFRSDLP 527
            GTLCE LLMVQA+ AN+I PNK +    K   + H+L+SETY+GGHVE LESGVFRSD+P
Sbjct: 357  GTLCEALLMVQAFHANIIFPNKQEQVFNKLTDDGHVLDSETYVGGHVEALESGVFRSDIP 416

Query: 528  TSFKLDPSAYEQLLNNLDRDLQYAIKVEGKMDLESVSNYDEVK----------------- 570
              FK++P+A++ LL  +++ +++AI+ E K+ L  V+N++EV                  
Sbjct: 417  CRFKMNPAAFDFLLQRVEKTMRHAIEEEEKIPLHQVTNFNEVCWLPVWSLSPQRFQLNVV 476

Query: 571  ----------NAIMEKLLRLQEEPIREECPLIYHLDVAAMYPNIILTNRLQPPSIVTDEV 620
                      + I  KL  L+E P R ECPLIYHLDV AMYPNIILTNRLQP ++V +  
Sbjct: 477  ERLWRFFQVCDEIKTKLTSLKEVPNRIECPLIYHLDVGAMYPNIILTNRLQPSAMVDEAT 536

Query: 621  CTACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYYHLKKQIESE-FVDGTNGHLSKSFLDL 679
            C ACDFN+PG  C R++ W WRGEI    RS+++ +++Q+ESE F         ++F  L
Sbjct: 537  CAACDFNKPGAACQRRMTWQWRGEIMPASRSEFHRIQQQLESEKFPPFFPNGPPRAFHTL 596

Query: 680  PKMEQQSRLKDRLKKYCQKAYKRVLDKPVTELRE--AGICMRENSFYVDTVRSFRDRRYE 737
             K EQ    K RL  YC+KAYK+     VT+L E    IC RENSFYVDTVR+FRDRRYE
Sbjct: 597  SKEEQAKHEKKRLADYCKKAYKKT---HVTKLEERVTTICQRENSFYVDTVRAFRDRRYE 653

Query: 738  YKGLNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHKCILNSFYGYVMRKGARWY 797
            +KGL+KVWK KLS A+ SG++ +++  ++M +LYDSLQLAHKCILNSFYGYVMRKGARWY
Sbjct: 654  FKGLHKVWKKKLSGAQESGDAAEVKRCKNMEILYDSLQLAHKCILNSFYGYVMRKGARWY 713

Query: 798  SMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLPGSFPENFTFKTKDLKK-K 856
            SMEMAG+V +TGA II  AR LIE+IG+PLELDTDGIWCVLP +FPENF  KT + KK K
Sbjct: 714  SMEMAGIVCFTGANIITQARELIEQIGRPLELDTDGIWCVLPNTFPENFVVKTSNEKKPK 773

Query: 857  LTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEFEVDGPYKAMILPASKE 916
            +T+SYP  MLN+ V    TN+QY  LV+P S TY   SE SI FEVDGPY AMILPASKE
Sbjct: 774  VTVSYPGAMLNIMVKEGFTNEQYHELVEPASLTYNVKSENSIFFEVDGPYLAMILPASKE 833

Query: 917  EGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFLHGSTIEECYSAVA 976
            EG  +KKRYAVFN+DG+LAELKGFE+KRRGEL+LIK+FQ+ +F+ FL G+T+EE Y++VA
Sbjct: 834  EGKKLKKRYAVFNEDGSLAELKGFEVKRRGELQLIKIFQSSVFEAFLKGTTLEEVYASVA 893

Query: 977  AVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLADYGEQKSCAVTTARRLSDFLGDT 1036
             VA+ WLD+L ++  ++ D+EL + ISE+ +MS+ L DYGEQKS +++TA+RL++FLGD 
Sbjct: 894  KVADYWLDVLYSKAANMPDAELFELISENRSMSRKLEDYGEQKSTSISTAKRLAEFLGDQ 953

Query: 1037 MVKDKGLRCQYIVACEPQGTPVSERAVPVAIFETDAEIMKFYLRKWCKTSS--DVGIRSI 1094
            MVKD GL C+Y+++ +P+G+PV+ERA+P+AIF+ +  + K +LRKW K  S  D+ IRSI
Sbjct: 954  MVKDAGLSCRYVISRKPEGSPVTERAIPLAIFQAEPSVKKHFLRKWLKMPSLHDLDIRSI 1013

Query: 1095 VDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLYKKVREKEDKFRQRKLVDIF 1154
            +DWSYY +RL SAIQKIITIPAA+Q+V NPVPRV HPDWL+KK+ EK D ++Q+K+ ++F
Sbjct: 1014 LDWSYYIERLGSAIQKIITIPAALQQVKNPVPRVRHPDWLHKKLLEKNDIYKQKKINELF 1073

Query: 1155 SSLKKDDFLNKTCNAETNLMDENVEDLEDF 1184
            +S  K    ++   A        V D+EDF
Sbjct: 1074 TSEGKRQVSHQPLEA------GQVADMEDF 1097



 Score =  121 bits (304), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 73/244 (29%), Positives = 119/244 (48%), Gaps = 34/244 (13%)

Query: 1442 LARYAHILWISDDGVPDLGGTSEEDECFADEVHQPVLTYPGAYRKVSVELKIHHLSVNAL 1501
            L ++ H+LW+S    PDLGG   +D     +             K SVE       +NA 
Sbjct: 1434 LRKHNHLLWLSPTSRPDLGGKEADDSRLVMDSDD----------KGSVE-------INA- 1475

Query: 1502 LKSNQVNEMEGGGLFGFDQDMNSGPYNNELCGFDETTSSAPAFRVVKQLIQRCLTDAVTS 1561
                       G      Q+ + G     L  F +         ++K ++   + +    
Sbjct: 1476 ----------QGCYSTGTQNRDGGEIRPMLLYFGKQR------LILKSMVVGWVREITQF 1519

Query: 1562 GNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEFRKLGATIIFANFS 1621
             NV+AD  + H YRWL SP S LHDP LHR LH +M+KVF  L++EF++LG+T+++ NF+
Sbjct: 1520 HNVYADNQVMHFYRWLRSPSSLLHDPALHRTLHNMMKKVFLQLISEFKRLGSTVVYGNFN 1579

Query: 1622 KVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLFMDQYNYGGIPARA 1681
            ++I+ T K  +  A  Y + +  ++ ++E+F  + +     W  LL+MD  NYGG+  + 
Sbjct: 1580 RIILCTKKRRIDDAIGYVEYITNSIHSKEIFHSLSISFSRCWEFLLWMDPANYGGVKGKL 1639

Query: 1682 DESL 1685
              S+
Sbjct: 1640 PSSV 1643



 Score = 94.0 bits (232), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 48/113 (42%), Positives = 73/113 (64%), Gaps = 9/113 (7%)

Query: 1821 AFALDQNVQHDVLVMRKNLLKYVRVREFAPEAEFRDPCPSFILPNVICSYCNDCRDLDLC 1880
              +LD N+ + +  ++++LL+ V V EF+ EA+F DPC S+ILP VIC +CN CRDLDLC
Sbjct: 1648 VLSLDANIINQMNKLKRDLLRLVDVGEFSDEAQFHDPCNSYILPEVICHHCNFCRDLDLC 1707

Query: 1881 RDMALLAQD------WHCAMPQCGQPYDREVMENALLQIVRQRERLYHLQDLV 1927
            +D + +AQD      W C+   C   Y+   +E AL++ ++++   Y LQDLV
Sbjct: 1708 KDPS-VAQDGSVLPQWFCS--NCQAQYETSTIEMALVEALQKKLMSYTLQDLV 1757


>gi|324500039|gb|ADY40032.1| DNA polymerase epsilon catalytic subunit A, partial [Ascaris suum]
          Length = 2104

 Score = 1188 bits (3074), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 634/1390 (45%), Positives = 875/1390 (62%), Gaps = 90/1390 (6%)

Query: 52   SSLEDEDTRKVYSCIDLYFVSQDGSTFKSKYKFRPYFYAATKEKMEMDVEAYLRRRYESQ 111
            S + +E ++ + S  D YF+ +DG  FK  Y FRPY Y  T    E  V +YL ++Y + 
Sbjct: 13   SEMVEEQSKVIISVCDFYFIEEDGQRFKISYPFRPYLYLGTLPSYEHQVSSYLLKKY-AG 71

Query: 112  IADIEILEKEDLDLKNHLSGLHKSYLKISFDTVQQLMDVKKDLLHVVERNQAKFDAAEAY 171
            I   E++EKEDLDLKNHL+GL +++LKI+F ++ +L   K+D+   + +NQ +   + +Y
Sbjct: 72   IITTEVVEKEDLDLKNHLAGLKRTFLKITFPSMSELQKFKRDVSGTIRKNQEREKNSTSY 131

Query: 172  ESILT-----GKREQRPQDFLDCIVDLREYDVPYHIRFAIDNDVRCGQWYDVSISSTG-- 224
             ++L+      K      + ++ ++D+RE+DVPY +R  ID  +  G WY+V        
Sbjct: 132  TTLLSRHLGSDKISADDGEVMENVIDIREHDVPYEMRVCIDEKIFVGLWYEVVGRDVNRR 191

Query: 225  PLLEKRVDLLQRAEVHVCAFDIETTKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVG 284
            P +     L+ + +  V A+DIE TKLPLKFPD+ +D IMMISYM+D +G+LI+NR+ V 
Sbjct: 192  PSMRPHPTLIDQPDPVVLAYDIEVTKLPLKFPDSTFDEIMMISYMIDARGFLIVNRQIVA 251

Query: 285  EDIEDLEYTPKPEFEGYFKVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLET 344
            +++ED EYTP+PE++G F++ N+ NE   ++ +F H+  V+P I+VTYNGD FDWPF+E 
Sbjct: 252  DNVEDFEYTPRPEYKGRFEIFNMENEAATIKCFFDHIIRVRPSIFVTYNGDSFDWPFVEA 311

Query: 345  RAAHHGFKMSEELGFQCDKNQGECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLG 404
            RAA HGF M  E+GF  D + GE ++  A H+D F WVKRDSYLP GSQ LKA TKAKL 
Sbjct: 312  RAAMHGFDMRAEIGFAKD-SAGEYKSTNAVHMDAFKWVKRDSYLPVGSQNLKACTKAKLR 370

Query: 405  YDPLEVNPEDMVRFAKEKPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVL 464
            YDPLE++PE M   A+E+PQ +A+YSVSDAVATYYLYM YVHPFIF+L TIIP+ PD VL
Sbjct: 371  YDPLELDPEQMCAMAREQPQTLANYSVSDAVATYYLYMKYVHPFIFALCTIIPLGPDNVL 430

Query: 465  RKGSGTLCEMLLMVQAYKANVICPNKH-QSDPEKFYRNHLLESETYIGGHVECLESGVFR 523
            RKGSGTLCE LLMV+A+  N+I PNK  Q+  +     H++ESETY+GGHVE LESGVFR
Sbjct: 431  RKGSGTLCEALLMVEAFHNNIIFPNKQVQTSNKHTADGHVIESETYVGGHVEALESGVFR 490

Query: 524  SDLPTSFKLDPSAYEQLLNNLDRDLQYAIKVEGKMDLESVSNYDEVKNAIMEKLLRLQEE 583
            +DLP  F++ PSA   L  N+ + L+ A+ +E  + ++ V+++D +   I++++      
Sbjct: 491  ADLPERFRIVPSAILMLQANVKKTLKDALTLELGVKMDEVTDFDAICEEIVQQMEDFIRR 550

Query: 584  PIREECPLIYHLDVAAMYPNIILTNRLQPPSIVTDEVCTACDFNRPGKTCLRKLEWVWRG 643
            P+R E P IYHLDV AMYPNIILTNRLQPP++VT+E C AC +N     C R + W WRG
Sbjct: 551  PMRIENPKIYHLDVGAMYPNIILTNRLQPPAVVTEEDCIACIYNTADAKCKRTMRWEWRG 610

Query: 644  EIFMGKRSDYYHLKKQIESEFVDGTNGHLSKSFLDLPKMEQQSRLKDRLKKYCQKAYKRV 703
            EI    + +Y  + +Q+E+E      G   K F  L + E+    + R++ +C++AY R 
Sbjct: 611  EIMPATKGEYERILQQLENE----KFGKPPKPFHGLSRDERILIERKRVQDFCKRAYGRT 666

Query: 704  LDKPVTELREAGICMRENSFYVDTVRSFRDRRYEYKGLNKVWKGKLSEAKASG-NSIKIQ 762
                  E R+  IC REN FYVDTV++FRDRRY+YK L K  K  LSE      N++K  
Sbjct: 667  -HITRNEYRDTTICQRENGFYVDTVKAFRDRRYQYKALLKKAKLALSEVPEDDINALK-- 723

Query: 763  EAQDMVVLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEK 822
             AQ  VVLY+SLQLAHKCILNSFYGYVMRKG+RW+SMEMAG+V +TGA II  AR L+E+
Sbjct: 724  SAQGRVVLYESLQLAHKCILNSFYGYVMRKGSRWFSMEMAGIVCHTGANIITEARKLVEQ 783

Query: 823  IGKPLELDTDGIWCVLPGSFPENFTFKTKDLKKK-LTISYPCVMLNVDVARNNTNDQYQT 881
            IGKPLELDTDGIWC++P SFPEN TF  ++ KKK +T+SYP  MLN  V    TN+QY +
Sbjct: 784  IGKPLELDTDGIWCLIPASFPENITFTLRNPKKKSVTVSYPGAMLNALVRDRFTNEQYHS 843

Query: 882  LVDPVSKTYETHSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFE 941
               P   TY+  SE SI FEVDGPY AMILPASKEEG  +KKRYAVFN DG+LAELKGFE
Sbjct: 844  F-QP-DGTYKVTSENSIFFEVDGPYLAMILPASKEEGKKLKKRYAVFNFDGSLAELKGFE 901

Query: 942  IKRRGELKLIKVFQAELFDKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDY 1001
            +KRRGEL +IK FQ  +F  FL G    E Y  VA  A+ WLD+L ++G D++DSE+ D 
Sbjct: 902  VKRRGELAMIKYFQTCVFKAFLKGKNHYEAYQNVAREADYWLDVLFSKGADLSDSEVFDL 961

Query: 1002 ISESSTMSKSLADYGEQKSCAVTTARRLSDFLGDTMVKDKGLRCQYIVACEPQGTPVSER 1061
            ISE+ +MSK L DYG QKS +++TA+RL++FLGD +VKD GL C++I++ +P G PV+ER
Sbjct: 962  ISENRSMSKKLDDYGSQKSTSISTAKRLAEFLGDDVVKDAGLACRFIISRKPIGAPVTER 1021

Query: 1062 AVPVAIFETDAEIMKFYLRKWCK----TSSDVGIRSIVDWSYYKQRLSSAIQKIITIPAA 1117
            A+P+AIF+    +   +LRKW +    T  ++ IR I+DW YY +R+   IQKIITIPAA
Sbjct: 1022 AIPLAIFQAAPAVAAHFLRKWTRDSEITKDNIDIRKIIDWDYYIERVGGTIQKIITIPAA 1081

Query: 1118 MQKVSNPVPRVVHPDWLYKKVREKEDKFRQRKLVDIFSSLKKD--------------DFL 1163
            +Q V NPVPR+  P+WL  + R++    +Q K+ D+F  +  +                L
Sbjct: 1082 LQNVPNPVPRIPFPEWLESRRRQRASDHKQPKITDVFKPISNNIIESQFDVEDICEGSAL 1141

Query: 1164 NKTCNAETNLMDENVEDLEDFPKKRRNSVNGPRPIVRCFEVNNEQKTVKTTDQVDSLRQQ 1223
            N+T     N + ++   L    + R + V G           NEQ+      Q+   R  
Sbjct: 1142 NRTTETADNSICDDTVTLRK--RARDDEVEG------IASSENEQR------QLKHFR-- 1185

Query: 1224 LEPSEVSDQQPSSQNAIDTENIDRIVDYKGWLELKKRKWKDNLDRRKKQKLGSLRASHQA 1283
                  +++ P  +  I  + +        W+   K +WK    + K++K+    +S   
Sbjct: 1186 ------TEELPVERKTITGDGV------VAWIRYLKARWK--WQKEKQRKVMFTPSSRGL 1231

Query: 1284 NGVSESLGDMINHKEAQRRTGVGSYFRRQETAMTRCHWQIIQLVPSSQSGVFLAWVVVEG 1343
            N    +L  M+   E+ RRT            M   +WQ++QL  S   G+   WV+V G
Sbjct: 1232 N----ALQSMV---ESNRRT------------MRETYWQLLQLSESLSRGILTMWVIVNG 1272

Query: 1344 IMVRIPITVPRLFYLNSKDPIVEKFPGRRVNKTLPHGRRSFNLIEVMIDEDQFRKESKKL 1403
             M+R+ + VPR+FY+N ++    +  G  V KTLP  +   NL    +DE +F+     L
Sbjct: 1273 RMLRMNLHVPRIFYVNDRES--NEAQGTLVKKTLPRMKPVINLYRYSVDESRFQSSLNVL 1330

Query: 1404 AALLADPEVE 1413
               L    VE
Sbjct: 1331 NRELCAMRVE 1340



 Score =  212 bits (540), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 144/565 (25%), Positives = 271/565 (47%), Gaps = 68/565 (12%)

Query: 1441 SLARYAHILWISDDGVPDLGGTSEEDEC---------FADEVHQPVLTYPGAYRKVSVEL 1491
            +L RY ++LW S    PDLGG  E D+C            E    ++ +     +V VEL
Sbjct: 1585 NLCRYGYVLWASPTRRPDLGG-KELDDCRIGVDWNSLCVSEQPAAIVNHSRLCTEVCVEL 1643

Query: 1492 KIHHLSVNALLKSNQVNEMEGG-GLFGFDQDMNSGPYNNE--------LCGFDETTSSAP 1542
            ++  L+V+AL+   ++ E EGG G  GF   ++S   + +        +  +DE  + + 
Sbjct: 1644 ELGALAVSALVHGARIAEAEGGSGSVGF---LSSASLSADALFGRVRTIAHYDEAAAVSG 1700

Query: 1543 AFRVVKQLIQRCLTDAVTSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFA 1602
            A +V++ ++Q C+ D   + N  AD ++ ++YRW+ +P + L++P + R    ++ K+  
Sbjct: 1701 ALKVLRLMLQDCVKDIHANSNPIADQLIVNIYRWIHTPRAFLYEPAIARAADMLVTKLCL 1760

Query: 1603 MLLAEFRKLGATIIFANFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHF 1662
            +L+AE  ++G  ++ A+  ++I+ T +  +  A+A+ ++L+  L+   LF  + + P+++
Sbjct: 1761 LLVAEINRMGGEVLHASQLRLIVCTKRGSMQLAQAFVNTLISTLRQNPLFAALYIAPLNY 1820

Query: 1663 WHSLLFMDQYNYGGIPARADESLDDDSQVD-IVSSWNIAEYLPK--EIQDHFVLVVSEFM 1719
            W+ LL+M+  NY GI         +DS+ D + S  +I   LP+    ++ F  ++  ++
Sbjct: 1821 WNVLLWMNTQNYVGI------KFGEDSEEDHVTSKLSIGNLLPEAAACKETFAQIIVGYI 1874

Query: 1720 YIPWKHAQKLAASRASLQEGSSCTPSITVAAAENFESHIVQYVKGEISSYFTGKLLSIVR 1779
             +    A+   +S +                       +++Y +  I +  + +L  ++ 
Sbjct: 1875 SMIGAKAKSEVSSES-----------------------LMRYREELIENELSERLFCVIS 1911

Query: 1780 DAIHHMKKMNNDQHNSPGVMQTAANIHKVDAPLEFIKHVCAAFALDQNVQHDVLVMRKNL 1839
                + + ++  +  S     +   +H  +APL+  K +    ALD  +   +  +R  L
Sbjct: 1912 KLAAYKEDISMPERTS-----SREPLH--NAPLQLAKCIIHFLALDAPLAQAIDKLRSQL 1964

Query: 1840 LKYVRVREFAPEAEFRDPCPSFILPNVICSYCNDCRDLDLCRDMALLAQDWHCAMPQCGQ 1899
            L+ +   E A EA +R  C    L  V C  CN   DLD C++ A     W+C    C +
Sbjct: 1965 LRLLGYGESAEEAVWRPMCVCCTLSQVFCEACNQFSDLDACQEDA-----WNCV--SCRK 2017

Query: 1900 PYDREVMENALLQIVRQRERLYHLQDLVCIRCNQVKAAHLAEQCACAGSFRCKEDASDFR 1959
            P   + +E  L++ V Q    Y LQD  C++C  ++   LA  C C+G F      S+FR
Sbjct: 2018 PLLTDAIERLLVERVNQLLIAYSLQDFKCVKCGSIRKDSLARSCECSGRFEGLVPESEFR 2077

Query: 1960 SKMQIFLNIANRQGFQLLQECTSWI 1984
              M++F  I  R+G  LL E   W+
Sbjct: 2078 FNMRVFARIGARRGLTLLSEACEWM 2102


>gi|357630899|gb|EHJ78718.1| hypothetical protein KGM_00715 [Danaus plexippus]
          Length = 2169

 Score = 1184 bits (3063), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 632/1427 (44%), Positives = 889/1427 (62%), Gaps = 108/1427 (7%)

Query: 12   RRTKKQKLIRSA--EEELEAKLGYDLFSEGDKRLGWLLTFASSSLEDEDTRKVYSCIDLY 69
            R    +  +R+A   +++++K G+D   +  +R G+L+   ++ + DED R V + +D Y
Sbjct: 28   REESSESRLRNALDNDKIDSKYGFDRVRDTKERTGYLINMHTAEILDEDKRLV-AAVDYY 86

Query: 70   FVSQDGSTFKSKYKFRPYFYAATKEKMEMDVEAYLRRRYESQIADIEILEKEDLDLKNHL 129
            F+  DGS FK    F+PYF    +++ E +V  YL +++   I  IE++EKEDLDL NHL
Sbjct: 87   FIEMDGSRFKVSLVFQPYFLVLARKECEQEVIQYLSKKFAGTIHKIEVVEKEDLDLPNHL 146

Query: 130  SGLHKSYLKISFDTVQQLMDVKKDLLHVVERNQAKFDAAEAYESILTG--------KREQ 181
            SG+ + Y+K+SF +  ++M V+K+LL    +++ +      Y  +LT         +  +
Sbjct: 147  SGIKQRYIKLSFMSQNEMMKVRKELLTAANKSKEREKKDAIYSEMLTNVLTNAAAIEHAK 206

Query: 182  RPQDFLDCIVDLREYDVPYHIRFAIDNDVRCGQWYDV-SISSTGPLLEKRVDLLQRAEVH 240
            +  D L+ I+D+RE+DVPYHIR +ID  + CG WY V S  +  P+  KR D+L+R +  
Sbjct: 207  KTTDHLENIIDIREHDVPYHIRVSIDMKIFCGTWYTVKSRGNDTPIFTKRDDILERPDPI 266

Query: 241  VCAFDIETTKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEG 300
            V AFDIETTKLPLKFPD+  D IMMISYM+D QGYLI NRE +  D+ED EYTPKPEFEG
Sbjct: 267  VLAFDIETTKLPLKFPDSQTDQIMMISYMIDAQGYLITNREIISTDVEDFEYTPKPEFEG 326

Query: 301  YFKVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQ 360
             F V N  NE+ L++ +F H+ ++KP I+VTYNGD+FDWPF+E RAA  G  M +E+GF 
Sbjct: 327  QFIVFNEPNELALIQKFFDHIMDIKPHIFVTYNGDFFDWPFVEARAAALGLDMRQEIGFS 386

Query: 361  CDKNQGECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAK 420
                 G    + A H+DC  WVKRDSYLP GSQGLKAV KAKL YDP+E++PEDM R A 
Sbjct: 387  RLTRDGTYACRPAMHMDCLCWVKRDSYLPVGSQGLKAVAKAKLRYDPVELDPEDMCRMAS 446

Query: 421  EKPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQA 480
            E+PQ++++YSVSDAVATYYLYM YV PFIF+L TIIP+ PDEVLRKGSGTLCE LLMV+A
Sbjct: 447  EQPQVLSNYSVSDAVATYYLYMKYVQPFIFALCTIIPLEPDEVLRKGSGTLCESLLMVEA 506

Query: 481  YKANVICPNKHQSDPEKFYRN-HLLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQ 539
            + AN++ PNK   +  K   + H+LE+ETY+GGHVE LESGVFR+D+   F++ PSA E+
Sbjct: 507  FHANIVFPNKQVDELNKLTSDGHVLETETYVGGHVEALESGVFRADIKCKFRIVPSAVEK 566

Query: 540  LLNNLDRDLQYAIKVEGKMDLESVSNYDEVKNAIMEKLLRLQEEPIREECPLIYHLDVAA 599
            L+ N+++ +++AI+VE  + LE V+N+DEV + I EKL  +++ P R+E PLIYHLDV A
Sbjct: 567  LIENIEKTMKHAIEVEEAVPLELVTNFDEVCSEIREKLQHMKDHPRRDENPLIYHLDVGA 626

Query: 600  MYPNIILTNRLQPPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYYHLKKQ 659
            MYPNIILTNRLQP ++V+   C ACD NRPG  C R+++W WRG+     RS+Y  +++Q
Sbjct: 627  MYPNIILTNRLQPSAMVSASACAACDHNRPGARCQRRMDWTWRGDYLPATRSEYQRIQQQ 686

Query: 660  IESEFVDGTNGHLSKSFLDLPKMEQQSRLKDRLKKYCQKAYKRVLDKPVTELREAGICMR 719
            +E+E                                               L   G  + 
Sbjct: 687  LETE-------------------------------------------KFPPLHPGGPNIY 703

Query: 720  ENSFYVDTVRSFRDRRYEYKGLNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHK 779
            E + ++  +    DRRYEYK LNK  K  ++EA  +G++  I+ A+   VLYDSLQLAHK
Sbjct: 704  EYTLHLPYI--IMDRRYEYKALNKQAKALVAEAVRAGDAADIKNARSREVLYDSLQLAHK 761

Query: 780  CILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLP 839
            CILNSFYGYVMR+GARW+SMEMAG+V +TGA II  AR +IE++G+PLELDTDGIWC+LP
Sbjct: 762  CILNSFYGYVMRRGARWHSMEMAGIVCHTGANIIMRAREIIEQVGRPLELDTDGIWCILP 821

Query: 840  GSFPENFTFKTK-DLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSI 898
             SFPEN T  T    KKK+ +SYP  +LN  V    TNDQY  LVDPV K YE  SE SI
Sbjct: 822  SSFPENVTINTTHHKKKKINVSYPNAVLNAMVKDYFTNDQYYELVDPVEKKYEVRSENSI 881

Query: 899  EFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAEL 958
             FEVDGPY AM+LPASKEEG  +KKRYAVFN DG+LAELKGFE+KRRGEL+LIK+FQ+ +
Sbjct: 882  FFEVDGPYLAMVLPASKEEGKKLKKRYAVFNFDGSLAELKGFEVKRRGELQLIKIFQSSV 941

Query: 959  FDKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLADYGEQ 1018
            F+ FL G+ ++ CY AVA VA+ WLD+L ++G ++ DSEL + ISE+ +MSK L DYG Q
Sbjct: 942  FEAFLKGNDLKSCYGAVAKVADYWLDVLYSKGSNMPDSELFELISENRSMSKKLEDYGGQ 1001

Query: 1019 KSCAVTTARRLSDFLGDTMVKDKGLRCQYIVACE-PQGTPVSERAVPVAIFETDAEIMKF 1077
            KS +++TA+RL++FLGD MVKD GL C + V  +       +                + 
Sbjct: 1002 KSTSISTAKRLAEFLGDEMVKDAGLACSFRVNRKYTHTHTHTRTHTHTHTHTHTHTHTQA 1061

Query: 1078 YLRKWCKTSS-DVGIRSIVDWSYYKQRLS-SAIQKI-ITIPAAMQKVSNPVPRVVHPDWL 1134
            Y   WC  S  D G   +++ +    RLS + I ++  T+  +   + NPVPRV +PDWL
Sbjct: 1062 YYILWCTCSGLDTGFLFVLELTRDAIRLSETYIGRVSYTVYKSRPSLDNPVPRVQYPDWL 1121

Query: 1135 YKKVREKEDKFRQRKLVDIFSSLKKDDFLNKTCNAETNLMDENVEDLEDFPKKRRNSVNG 1194
            +KK+  K DK++ RK+ ++F+S  K+    + C       +    D+ED  K+   +   
Sbjct: 1122 HKKILAKTDKYKTRKITEMFTSKPKEI---RNCEDADAACESTEVDIEDIGKE--CTAKP 1176

Query: 1195 PRPIVRCFEVNNEQKTVKTTDQVDSLRQQLEPSEVSDQQPSSQNAIDTENIDRIVDYKGW 1254
             +P+        ++K   +  +  S R+ L P       PS  +  +            W
Sbjct: 1177 IQPVAH----RVKRKREPSPRRASSWREALGPP------PSFGDTKEQRT--------AW 1218

Query: 1255 LELKKRKWKDNL------DRRKKQKLGSLRASHQANGVSESLGDMINHKEAQRRTGVGSY 1308
            +  +K+KW   +      DR K+ K+ S       + +S+SLG             +G +
Sbjct: 1219 IVFQKKKWMWQMEQRGVRDRNKRGKVDS-----DVSLMSKSLGPA---------NTLGGF 1264

Query: 1309 FRRQETAMTRCHWQIIQLVPSSQSGVFLAWVVVEGIMVRIPITVPRLFYLNSKDPIV-EK 1367
             +R +  +    WQ+IQ+  +++ GVF  W +V   + ++ +TVPR FY+N + P+  + 
Sbjct: 1265 IKRAQRTLLNTPWQVIQIQETAEPGVFRVWSLVGSELHQLKLTVPRQFYVNRRVPLTCDT 1324

Query: 1368 FPG-RRVNKTLPHGRRSFNLIEVMIDEDQFRKESKKLAALLADPEVE 1413
             P  RRV++ LP  R + +L    + E  +R+  ++L + L+ PE+E
Sbjct: 1325 GPHWRRVSRVLPRSRPAHHLYLYTVPEALYRERCQELMSELSAPEIE 1371



 Score =  266 bits (679), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 171/566 (30%), Positives = 278/566 (49%), Gaps = 56/566 (9%)

Query: 1442 LARYAHILWISDDGVPDLGGTSEEDECF---ADEVHQPVLTYPGAYRKVSVELKIHHLSV 1498
            L ++  +LW S    PDLGG   +D      +DE     +   G+Y  V V L    L+V
Sbjct: 1635 LLKHNFVLWCSGSERPDLGGREIDDNRLVSESDEWSSCRVCSRGSYGGVCVALTGDALAV 1694

Query: 1499 NALLKSNQVNEMEGGGL---FGFD----QDMNSGPYNNELCGFDETTSSAPAFRVVKQLI 1551
            +ALL+++ + + EG  +   FG      QD+ +   +N    +DET   + AF++++ ++
Sbjct: 1695 SALLQAHTILQTEGTSVATSFGAQHANIQDVMASTGSNATETYDETAQCSAAFKILRTMV 1754

Query: 1552 QRCLTDAVTSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEFRKL 1611
               L D     NVFAD  + H YRWL SP S L+DP L R L+ +M+K+F ML+AEFR+L
Sbjct: 1755 ASWLRDVTHYKNVFADFQISHFYRWLKSPTSLLYDPALRRTLYSLMKKLFLMLVAEFRRL 1814

Query: 1612 GATIIFANFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLFMDQ 1671
            G+ II+A+F+K+I+ T K  L     Y + ++++++ +ELF  I++     W  LL++D+
Sbjct: 1815 GSQIIYADFNKIILYTKKHSLMDGIGYVEFVVQSIRNKELFHGIDIRYKQCWTYLLWLDE 1874

Query: 1672 YNYGGIPARADESL------------DDDSQVDIVSSWNIAEYLPKEIQDHFVLVVSEFM 1719
             NY GI  +    L            D + + +I   WNI+ ++P   ++ FV  V+ F+
Sbjct: 1875 ANYAGIEGKLPAGLVEVGSSQIPDNTDVEEEGEITMEWNISRFMPGITRESFVSCVAGFL 1934

Query: 1720 YIPWKHAQKLAASRASLQEGSSCTPSITVAAAENFESHIVQYVKGEISSYFTGKLLSIVR 1779
                        S A    G+                     +K  ++   T K   +  
Sbjct: 1935 ------------SAAHADSGT---------------------LKAMLAGEMTQKFFQLAE 1961

Query: 1780 DAIHHMKKMNNDQHNSPGVMQTAANIHKVDAPLEFIKHVCAAFALDQNVQHDVLVMRKNL 1839
                 M  ++ +    P       ++      L F+  +C    LD N++ +V ++R+NL
Sbjct: 1962 KINRRMPTLSLED-IGPQAGLREESLEGATPALLFVNALCHVLGLDTNLEDEVTLLRRNL 2020

Query: 1840 LKYVRVREFAPEAEFRDPCPSFILPNVICSYCNDCRDLDLCRDMALLAQDWHCAMPQCGQ 1899
            L+ + V EF+  AE+RDPC S +L  + C  CN  +DLDLCR      +   C  P CG 
Sbjct: 2021 LRLLSVGEFSSLAEWRDPCASCVLAELSCRVCNHSQDLDLCRTQHHDNEQPVCLCPTCGT 2080

Query: 1900 PYDREVMENALLQIVRQRERLYHLQDLVCIRCNQVKAAHLAEQCACAGSFRCKEDASDFR 1959
             YD + +E  L++ + +R   Y LQDL+C RC+QVK  +L+  C CAG F       + R
Sbjct: 2081 AYDNQELEWKLIETMNRRAMSYTLQDLICTRCHQVKRENLSTVCDCAGEFTTMVSLKEIR 2140

Query: 1960 SKMQIFLNIANRQGFQLLQECTSWIL 1985
            +++  +  IA      LL E  ++ L
Sbjct: 2141 TQLMTYKTIAEYYKMPLLMELIAYNL 2166


>gi|296419855|ref|XP_002839507.1| hypothetical protein [Tuber melanosporum Mel28]
 gi|295635668|emb|CAZ83698.1| unnamed protein product [Tuber melanosporum]
          Length = 2165

 Score = 1179 bits (3050), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 577/1055 (54%), Positives = 752/1055 (71%), Gaps = 21/1055 (1%)

Query: 26   ELEAKLGYDLFSEGDKRLGWLLTFASSSLEDEDTRKVYSCIDLYFVSQDGSTFKSKYKFR 85
            +++ ++G+  F  G K++GWL+   S+ LED       + +D YF+   G +FK+   + 
Sbjct: 60   DIDERMGFARFEAGPKKVGWLVNMKSTILEDGQVTGGKAGVDYYFLDDYGGSFKATVLYD 119

Query: 86   PYFYAATKEKMEMDVEAYLRRRYESQIADIEILEKEDLDLKNHLSGLHKSYLKISFDTVQ 145
            PYF  ATK   E +VE +LRR++E  I     L KEDL + NHL G  ++++K+ F  V 
Sbjct: 120  PYFLIATKRGNEPEVEEWLRRKFEGIIKKTSRLTKEDLRMPNHLLGYRRTFIKLEFVNVT 179

Query: 146  QLMDVKKDLLHVVERNQAKFDAAEAYESILTG-------------KREQRPQDFLDCIVD 192
             L+  +K L+ + E+N+   +A +AY  + +              +R     +  D I+D
Sbjct: 180  NLLAARKVLMPIAEKNRKNVNAMDAYAEVASASAGFDFIDEGNDLRRSTNMVEACDFIID 239

Query: 193  LREYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLLEKRVDLLQRAEVHVCAFDIETTKLP 252
            +REYDVPYH+R AID ++R G+WY V        L    D L++AE  V A+DIETTKLP
Sbjct: 240  IREYDVPYHVRVAIDQEIRIGKWYTVEAKHGIVSLTCIEDRLKQAEPVVLAWDIETTKLP 299

Query: 253  LKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNVNNEIE 312
            LKFPDA  D IMMISYM++G G+LI NRE V +DIED EYTP+PE+EG+F V N  +E  
Sbjct: 300  LKFPDASIDQIMMISYMIEGSGFLITNREIVSQDIEDFEYTPRPEYEGHFMVFNEPDEKA 359

Query: 313  LLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDKNQGECR-AK 371
            +L  +F H++E KP + VTYNGD+FDWPF+E RA+  G  +  E+GF+  KN  +   + 
Sbjct: 360  VLERFFDHIKEAKPTVMVTYNGDFFDWPFVEARASQLGIDVYREIGFR--KNSEDVYYSN 417

Query: 372  FACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQMMASYSV 431
            ++ H+D FAWVKRDSYLPQGSQGLKAVT AKLGYDP E++PE M R+A EKPQ++A YSV
Sbjct: 418  YSAHMDAFAWVKRDSYLPQGSQGLKAVTTAKLGYDPDELDPELMTRYAMEKPQVLAEYSV 477

Query: 432  SDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVICPNKH 491
            SDAVATYYLYM YVHPF+F+L TIIP+ PD+VLRKG+GTLCEMLLMVQAY+  ++ PNKH
Sbjct: 478  SDAVATYYLYMKYVHPFVFALCTIIPLGPDDVLRKGTGTLCEMLLMVQAYRKEIVLPNKH 537

Query: 492  QSDPEKFYRNHLLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQLLNNLDRDLQYA 551
            +   E F+  HLL SETY+GGHVE +E+GVFRSD+P +F +D  A ++L+ +LD  LQ++
Sbjct: 538  KQVEEAFFDGHLLGSETYVGGHVESIEAGVFRSDIPANFVIDTGAIDKLIEDLDSALQFS 597

Query: 552  IKVEGKMDLESVSNYDEVKNAIMEKLLRLQEEPIREECPLIYHLDVAAMYPNIILTNRLQ 611
            I VEGK  +E V+NYDEVK  I  KL +L++ P R E P IYHLDVA+MYPNI+ TNRLQ
Sbjct: 598  IVVEGK-KMEDVTNYDEVKEQIRSKLQQLRDLPARNERPSIYHLDVASMYPNIMTTNRLQ 656

Query: 612  PPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYYHLKKQIESE-FVDGTNG 670
            P S++++  C ACDFNRPGKTC R+L W WRGE    KR +Y  ++  +E+E F      
Sbjct: 657  PDSMISESDCAACDFNRPGKTCDRRLPWAWRGEYLPAKRDEYNMIRYSLENEKFPPKHPK 716

Query: 671  HLSKSFLDLPKMEQQSRLKDRLKKYCQKAYKRVLDKPVTELREAGICMRENSFYVDTVRS 730
               +++ DL   EQ S +K RL  Y +K Y ++ +    E +EA IC REN FYVDTV++
Sbjct: 717  SPQRTWDDLTSEEQASAIKKRLADYSKKVYHKIHETKTIE-KEAIICQRENPFYVDTVKN 775

Query: 731  FRDRRYEYKGLNKVWKGKLSEAKASG-NSIKIQEAQDMVVLYDSLQLAHKCILNSFYGYV 789
            FRDRRY++KG  K WK K  + KASG  + +I EA  M VL+DS+QLAHK ILNSFYGYV
Sbjct: 776  FRDRRYDFKGKQKAWKRKADDLKASGATAAEIDEANKMTVLFDSMQLAHKVILNSFYGYV 835

Query: 790  MRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLPGSFPENFTFK 849
            MRKG+RWYSMEMAGV   TGA IIQ A+ ++E+IG+PLELDTDGIWC+LPG+FPENF F 
Sbjct: 836  MRKGSRWYSMEMAGVTCLTGAHIIQLAKEIVERIGRPLELDTDGIWCILPGTFPENFAF- 894

Query: 850  TKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEFEVDGPYKAM 909
            T +  KKL ISYPCVMLN  V    TN QY  LVDP +  Y+THSE +I FEVDGPY+AM
Sbjct: 895  TLEGGKKLPISYPCVMLNHLVHAKFTNHQYSELVDPATHRYKTHSENTIFFEVDGPYRAM 954

Query: 910  ILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFLHGSTIE 969
            ILP SKEE   +KKRYAVFN DG+LAELKGFE+KRRGELKLIK+FQ+++F  FL G+++E
Sbjct: 955  ILPTSKEEDKNLKKRYAVFNHDGSLAELKGFEVKRRGELKLIKIFQSQIFKFFLEGTSLE 1014

Query: 970  ECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLADYGEQKSCAVTTARRL 1029
            ECY AVA  ANRWLD+L  +G+ +AD ELID I E+ +MSK+LA+YG QKS ++TTA+RL
Sbjct: 1015 ECYGAVAKTANRWLDVLHLRGRTLADEELIDLICENRSMSKTLAEYGSQKSTSITTAKRL 1074

Query: 1030 SDFLGDTMVKDKGLRCQYIVACEPQGTPVSERAVP 1064
            ++FLG+ MVKDKGL C+YIV+ +P+  P  +  VP
Sbjct: 1075 AEFLGEQMVKDKGLNCKYIVSAKPRNAPKVDNPVP 1109



 Score =  246 bits (629), Expect = 7e-62,   Method: Compositional matrix adjust.
 Identities = 160/619 (25%), Positives = 293/619 (47%), Gaps = 63/619 (10%)

Query: 1415 LGWQQNAAKIGMQRCAASSQWFNERISLARYAHI-------------------------- 1448
            LGWQ   AK  +    A   W    + LARY  I                          
Sbjct: 1559 LGWQTFVAKRIVTHYLALGAWILHLVELARYGRIPLCNLERDDPTFLIDIDYARRLQKNN 1618

Query: 1449 --LWISDDGVPDLGGTSEEDECFADE-VHQPVLTYPGAYRKVSVELKIHHLSVNALLKSN 1505
              LW S    PD GG  ++D   + E V  P +  PG+Y  V +E+++ +L++N +L S+
Sbjct: 1619 VVLWWSPSPKPDHGGYEKDDILGSMETVDMPAINNPGSYSSVCIEIEVRNLAINTILTSS 1678

Query: 1506 QVNEMEGGGLFGFDQDMNSG--PYNNELCGFDETTSSAPAFRVVKQLIQRCLTDAVTSGN 1563
             +NE+EG      +     G  P +     F     +     V+++++ +  +   T G 
Sbjct: 1679 LINELEGSDSVAMNPAAPQGDDPTDGTNIIFANNAFTTAGVAVLREMV-KAWSALATRGQ 1737

Query: 1564 VFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEFRKLGATIIFANFSKV 1623
              A+ +++HL RW+ SP S L+D  LH  +  + +K F  LL +FR++G+ I+FAN +K+
Sbjct: 1738 PVAEIMVEHLVRWVESPDSFLYDRALHYYVQTMSKKAFLQLLTDFRRVGSHIVFANVNKL 1797

Query: 1624 IIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLFMDQYNYGGIPARADE 1683
            ++ T K D+  A AY + ++KA++ + LF +++L+   +W  L++ D+ N+GG   +A E
Sbjct: 1798 LVQTTKTDVGNAYAYSEYIIKAIRAKPLFNFLDLKINEYWDYLVWYDEMNHGG---KACE 1854

Query: 1684 SL--DDDSQVDIVSSWNIAEYLPKEIQDHFVLVVSEFMYIPWKHAQKLAASRASLQEGSS 1741
             +   ++ +++I+  W  A++LP+ +Q  F   V EF  +   HAQK  +  AS    S+
Sbjct: 1855 KIVEAENQELNIIMHWQFAKFLPQTLQTIFHDWVVEF--VEAIHAQKNPS--ASGPNAST 1910

Query: 1742 CTPS-ITVAAAENFESHIVQYVKGEISSYFTGKLLSIVR----DAIHHMKKMNNDQHNSP 1796
              P+ I    +E+    ++  +  E       ++  ++R      IH    ++ +  + P
Sbjct: 1911 PWPTQIFFKMSEDSGDKVI--LGNEFKKPLRKQIGQLIRRQQESMIHPEIDVDFEFPSLP 1968

Query: 1797 GVMQTAANIHKVDAPLEFIKHVCAAFALDQNVQHDVLVMRKNLLKYVRVREFAPEAEFRD 1856
            G  +   N       L+ ++ + A F L + +  +  ++RK LL  + ++EF+ E  F +
Sbjct: 1969 GAYRDMKN-----PVLQLVRSLTAVFGLAKEINTEARILRKELLALLDIKEFSKEGTFEN 2023

Query: 1857 PCPSFILPNVICSYCNDCRDLDLCRDMALL----------AQDWHCAMPQCGQPYDREVM 1906
            P  +     VIC  C   RD+DLC+D  L+           + W C    CG  +DR   
Sbjct: 2024 PSETLKFSQVICKNCALPRDMDLCKDEDLMPEVTADGQLRGRAWKCKFDFCGGEFDRLAF 2083

Query: 1907 ENALLQIVRQRERLYHLQDLVCIRCNQVKAAHLAEQCACAGSFRCKEDASDFRSKMQIFL 1966
            E  ++  + Q    Y++QDL C +C  +K     E C+C+G +    +      ++ ++ 
Sbjct: 2084 EEKMISQLHQFVTAYNVQDLKCGKCQTLKVNEFMEHCSCSGPWVLTAEREVLVKRLHVYK 2143

Query: 1967 NIANRQGFQLLQECTSWIL 1985
            ++A    F++L+     I+
Sbjct: 2144 SVAEHYSFRMLEGVVGDIM 2162



 Score =  122 bits (306), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 86/305 (28%), Positives = 146/305 (47%), Gaps = 49/305 (16%)

Query: 1115 PAAMQKVSNPVPRVVHPDWLYKKVREKEDKFRQRKLVDIFSSLKKDDFLNKTCNAETNLM 1174
            P    KV NPVPRV HPDWL +++  ++D+F+Q+K+ D+F    + + +    +      
Sbjct: 1098 PRNAPKVDNPVPRVPHPDWLQRRIDIEDDRFKQKKMTDMFQKRTELEIVPPGVSM----- 1152

Query: 1175 DENVEDLEDFPKKRRNSVNGPRPIVRCFEVNNEQKTVKTTDQVDSLRQQLEPSEVSDQQP 1234
              +++D+EDF       +N  RP++   +   ++K   T            P+ V     
Sbjct: 1153 --HLDDMEDFGGTTTMPLN--RPMLATAKRLGKRKAPDT------------PAPVGGDPF 1196

Query: 1235 SSQNAIDTENIDRIVDYKGWLELKKRKWK-DNLDRRKKQKLGSLRASHQANGVSESLGDM 1293
            +S  A+     +   DYKGWL+ +K+KWK     R ++++L   R+S QA+         
Sbjct: 1197 ASLPAVMPPMTE---DYKGWLQYQKKKWKIQKHARTRRRQLFGDRSSLQAD--------- 1244

Query: 1294 INHKEAQRRTGVGSYFRRQETAMTRCHWQIIQLVPSSQSGVFLAWVVVEGIMVRIPITVP 1353
                       +G +FR Q   M    W+I+QL P+   G   A+++V   ++ + I VP
Sbjct: 1245 ----------SIGGFFRNQTEFMLSNTWEILQLRPTDMPGEVRAFILVGRKIITLKIKVP 1294

Query: 1354 RLFYLNSK-----DPIVEKFPGRRVNKTLPHGRRSFNLIEVMIDEDQFRKESKKLAALLA 1408
            R  ++N K     D  V+     RVN TLP+G  S NL ++++ ED +  E K  + + +
Sbjct: 1295 RQIFINFKSEELPDVTVKGCIVERVNHTLPNGHPSGNLFKLVVPEDTYISEQKAFSIIFS 1354

Query: 1409 DPEVE 1413
               VE
Sbjct: 1355 HASVE 1359


>gi|405959766|gb|EKC25760.1| DNA polymerase epsilon catalytic subunit A [Crassostrea gigas]
          Length = 1004

 Score = 1172 bits (3032), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 568/987 (57%), Positives = 744/987 (75%), Gaps = 14/987 (1%)

Query: 57   EDTRKVYSCIDLYFVSQDGSTFKSKYKFRPYFYAATKEKMEMDVEAYLRRRYESQIADIE 116
            ++ +++ S +D YF+ +DGS FK+   F+PYF+ ATK+  E +V +YL +++  ++A +E
Sbjct: 8    DENKQLISAVDYYFLEEDGSRFKATLPFKPYFFVATKQGCEREVASYLTKKFSGKLATVE 67

Query: 117  ILEKEDLDLKNHLSGLHKSYLKISFDTVQQLMDVKKDLLHVVERNQAKFDAAEAYESILT 176
             + KEDLDL NHL GL + YLK+SF +V+ L  V++++   V +N+ +  ++EAY ++L+
Sbjct: 68   TVFKEDLDLPNHLVGLKRQYLKLSFLSVEDLTKVRREIQPAVRKNKEREQSSEAYTTLLS 127

Query: 177  G--------KREQRPQDFLDCIVDLREYDVPYHIRFAIDNDVRCGQWYDVSISSTGPL-L 227
                       E +  + ++ I+D+REYDVPYH+R +ID  +  G WY V    + P+ +
Sbjct: 128  NHLLGADGDNSENKATNQMENIIDIREYDVPYHVRVSIDLKIFVGHWYTVRGRGSLPVEI 187

Query: 228  EKRVDLLQRAEVHVCAFDIETTKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDI 287
              R DL+ R +  V AFDIETTKLPLKFPD+  D I+MISYM+DGQG+LI NRE V +D+
Sbjct: 188  RHREDLVDRPDPVVLAFDIETTKLPLKFPDSQTDQIIMISYMIDGQGFLICNREIVSQDV 247

Query: 288  EDLEYTPKPEFEGYFKVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAA 347
            ED EYTP+PEFEG F V N  +E  LLR +F H+ EVKP I+VTYNGD FDWPF+ETRAA
Sbjct: 248  EDFEYTPRPEFEGPFTVFNEPDEEALLRRFFDHILEVKPQIFVTYNGDSFDWPFVETRAA 307

Query: 348  HHGFKMSEELGFQCDKNQGECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDP 407
             H   MS E+GFQ D NQGE +++ A H+DC+ WVKRDSYLP GSQ LKAV KAKL Y+P
Sbjct: 308  IHDIDMSLEIGFQKD-NQGEYKSRPAVHMDCYRWVKRDSYLPVGSQNLKAVAKAKLRYNP 366

Query: 408  LEVNPEDMVRFAKEKPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKG 467
            +E++PE+M R A E+PQ++A+YSVSDAVATYYLYM YVHPF F+L TIIPM PDEVLRKG
Sbjct: 367  VELDPEEMCRMASEEPQVLANYSVSDAVATYYLYMKYVHPFTFALCTIIPMEPDEVLRKG 426

Query: 468  SGTLCEMLLMVQAYKANVICPNKHQSDPEKFYRN-HLLESETYIGGHVECLESGVFRSDL 526
            SGTLCE LLMVQAY AN++ PNK ++   K   + H+L+SETY+GGHVE LESGVFR+++
Sbjct: 427  SGTLCEALLMVQAYHANIVFPNKQEAIWNKMTDDGHVLDSETYVGGHVEALESGVFRANI 486

Query: 527  PTSFKLDPSAYEQLLNNLDRDLQYAIKVEGKMDLESVSNYDEVKNAIMEKLLRLQEEPIR 586
            P  F++ P A++ L++ +D+ +++AI+VE K+ +E V+N+DEV   I+E L  L++ P R
Sbjct: 487  PCRFRMVPEAFQNLIDKVDKTMKHAIEVEEKIPMEEVTNFDEVCADIIESLSMLRDCPNR 546

Query: 587  EECPLIYHLDVAAMYPNIILTNRLQPPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEIF 646
             E P+IYHLDV AMYPNIILTNRLQPP+I+ +  C ACDFN+PG TC RKL W+WRGE  
Sbjct: 547  LENPIIYHLDVGAMYPNIILTNRLQPPAIIDESTCAACDFNKPGATCQRKLPWMWRGEYM 606

Query: 647  MGKRSDYYHLKKQIESE-FVDGTNGHLSKSFLDLPKMEQQSRLKDRLKKYCQKAYKRVLD 705
               R++++ +++Q+E+E F     G   ++F  L K EQ +  K RL  YC+KAYK+V  
Sbjct: 607  PASRNEFHRIQQQLENEKFPPYQPGGPPRAFHQLTKEEQATAEKKRLSDYCRKAYKKVHS 666

Query: 706  KPVTELREAGICMRENSFYVDTVRSFRDRRYEYKGLNKVWKGKLSEAKASGNSIKIQEAQ 765
              + E R A IC RENSFYVDTVR+FRDRRYE+KGLNK W  KL+EAK SG++ +I++A 
Sbjct: 667  TRIEE-RIATICQRENSFYVDTVRAFRDRRYEFKGLNKAWGKKLAEAKKSGDAAEIKKAN 725

Query: 766  DMVVLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGK 825
             MVVLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVV YTGA II  AR ++E+IG+
Sbjct: 726  GMVVLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVCYTGANIITKAREIVEQIGR 785

Query: 826  PLELDTDGIWCVLPGSFPENFTFKTKDLKK-KLTISYPCVMLNVDVARNNTNDQYQTLVD 884
            PLELDTDGIWCVLP +FPEN+  KT + KK K+T+SYP  MLN+ V    TNDQYQ L D
Sbjct: 786  PLELDTDGIWCVLPATFPENYVVKTTNAKKPKVTVSYPGAMLNIMVKDFFTNDQYQELED 845

Query: 885  PVSKTYETHSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKR 944
              S  Y   SE SI FEVDGPY AMILPASKEEG  +KKRYAVFN DG+LAELKGFE+KR
Sbjct: 846  ARSLKYSVRSENSIFFEVDGPYLAMILPASKEEGKKLKKRYAVFNFDGSLAELKGFEVKR 905

Query: 945  RGELKLIKVFQAELFDKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISE 1004
            RGEL+LIK+FQ+ +F+ FL G+T++ECY+AVA VA+ WLD+L ++  ++ DSEL + I+E
Sbjct: 906  RGELELIKIFQSSVFEAFLKGTTLDECYAAVAKVADYWLDVLFSKAANMPDSELFELIAE 965

Query: 1005 SSTMSKSLADYGEQKSCAVTTARRLSD 1031
               MS++LADYGEQKS +++TA+RL++
Sbjct: 966  KRNMSRTLADYGEQKSTSISTAKRLAE 992


>gi|170590157|ref|XP_001899839.1| DNA polymerase family B, exonuclease domain containing protein
            [Brugia malayi]
 gi|158592758|gb|EDP31355.1| DNA polymerase family B, exonuclease domain containing protein
            [Brugia malayi]
          Length = 2067

 Score = 1167 bits (3019), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 623/1374 (45%), Positives = 860/1374 (62%), Gaps = 83/1374 (6%)

Query: 56   DEDTRKVYSCIDLYFVSQDGSTFKSKYKFRPYFYAATKEKMEMDVEAYLRRRYESQIADI 115
            DE T+ + +  D YF+ +DG  FK  Y FRPY Y AT    E  V +YL ++Y S I   
Sbjct: 3    DEQTKNIIAVCDFYFIQEDGGRFKISYPFRPYLYIATLPSFEHQVLSYLSKKYAS-IITT 61

Query: 116  EILEKEDLDLKNHLSGLHKSYLKISFDTVQQLMDVKKDLLHVVERNQAKFDAAEAYESIL 175
             I+EKEDLDLKNHLSGL ++YLKISF ++ +L+  KKD+  +++RNQ +     +Y ++L
Sbjct: 62   NIVEKEDLDLKNHLSGLKRTYLKISFPSLSELLKFKKDITPILKRNQEREKQTTSYTNLL 121

Query: 176  T---GKREQRPQD--FLDCIVDLREYDVPYHIRFAIDNDVRCGQWYDVSISSTG--PLLE 228
            T   G +E    +   L+ I+DLRE+D+PY +R  ID +V  G WY V+       P + 
Sbjct: 122  TRHFGLQEVLSDEGGVLEKIIDLREHDLPYQMRVCIDLEVFVGLWYRVTGRDLDRKPKIT 181

Query: 229  KRVDLLQRAEVHVCAFDIETTKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIE 288
            +   L+   E  V A+DIE TKLPLKFPD+ +D IMMISYM++G G+LIINR+ +  D++
Sbjct: 182  RHPTLIDPPEPVVLAYDIEVTKLPLKFPDSSFDEIMMISYMVNGNGFLIINRQIISSDVD 241

Query: 289  DLEYTPKPEFEGYFKVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAH 348
            D EYTP+PE++G F+V N+ +E  +++ +F H+  ++P ++VTYNGD FDWPF+E RAA 
Sbjct: 242  DFEYTPRPEYKGIFRVINLPDEKTVIKYFFDHIIRLRPTVFVTYNGDSFDWPFVEARAAV 301

Query: 349  HGFKMSEELGFQCDKNQGECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPL 408
            H   M  E+G     + GE RA  A HLD F WVKRDSYLP GSQ LKA TKAKL YDP+
Sbjct: 302  HNLNMQTEIGVS-RNSSGEYRATNAVHLDAFKWVKRDSYLPVGSQNLKACTKAKLRYDPV 360

Query: 409  EVNPEDMVRFAKEKPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGS 468
            E++PE M   AK++PQM+A+YSVSDAVATYYLY+ YVHPFIF+L TIIP+ PD+VLRKGS
Sbjct: 361  ELDPEQMCAMAKDEPQMLANYSVSDAVATYYLYIKYVHPFIFALCTIIPLGPDDVLRKGS 420

Query: 469  GTLCEMLLMVQAYKANVICPNKHQSDPEKFYRN-HLLESETYIGGHVECLESGVFRSDLP 527
            GTLCE LLMV+A++ N+I PNK      K+  + H++ESETY+GGHVE LESGVFR+D+P
Sbjct: 421  GTLCEALLMVKAFQNNIIFPNKSLHYGTKYTTDGHVIESETYVGGHVEALESGVFRADIP 480

Query: 528  TSFKLDPSAYEQLLNNLDRDLQYAIKVEGKMDLESVSNYDEVKNAIMEKLLRLQEEPIRE 587
              F++ P+A   L  ++ + L  ++  E  + ++ V ++D+V + +  +L    + P+R 
Sbjct: 481  EKFRIIPAAILDLKRDVRKTLSDSLIREFGVTMDEVIDFDKVVSKVETQLDDFIKRPLRL 540

Query: 588  ECPLIYHLDVAAMYPNIILTNRLQPPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEIFM 647
            E P IYHLDV AMYPNIILTNRLQP ++VT+E C AC +N P   C R + W WRGEI  
Sbjct: 541  ETPKIYHLDVGAMYPNIILTNRLQPSAVVTNEDCIACVYNSPEAKCQRTMRWEWRGEIMP 600

Query: 648  GKRSDYYHLKKQIESEFVDGTNGHLSKSFLDLPKMEQQSRLKDRLKKYCQKAYKRVLDKP 707
              R +Y  + +Q+E+E    T G   ++F  L   ++      R+K +C++AY +     
Sbjct: 601  ASRGEYERILQQLENE----TFGKPPRAFHSLDYEQRVQIEAKRVKDFCKRAYGKT-HIT 655

Query: 708  VTELREAGICMRENSFYVDTVRSFRDRRYEYKGLNKVWKGKLSEAKASGNSI-KIQEAQD 766
              E R   IC REN+FYVDTV+SFRDRRYEYK + K  K K    + S + I  ++ AQ 
Sbjct: 656  RNEYRYTTICERENAFYVDTVKSFRDRRYEYKAMLKASKAKAVLDEVSEDDIHALKTAQG 715

Query: 767  MVVLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKP 826
             +VLY+SLQLAHKCILNSFYGYVMRKGARW+SMEMAG+V +TGA II  AR L+E+IGKP
Sbjct: 716  RIVLYESLQLAHKCILNSFYGYVMRKGARWFSMEMAGIVCHTGANIITEARKLVERIGKP 775

Query: 827  LELDTDGIWCVLPGSFPENFTFKTKDLKKK-LTISYPCVMLNVDVARNNTNDQYQTLVDP 885
            LELDTDGIWC++PG+FPEN TF     K+K +T+SYP  +LN  +    TN+Q+  L +P
Sbjct: 776  LELDTDGIWCLIPGTFPENITFTLNSSKRKTVTVSYPGAILNALIHDKFTNNQFHQL-EP 834

Query: 886  VSKTYETHSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRR 945
               TY   SE SI FEVDGPY AMILPAS+EEG  +KKRYAVFN DG+LAELKGFE+KRR
Sbjct: 835  -DGTYSVTSENSIFFEVDGPYLAMILPASREEGKKLKKRYAVFNFDGSLAELKGFEVKRR 893

Query: 946  GELKLIKVFQAELFDKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISES 1005
            GEL LIK FQ+ +F  FL G +  E Y   A  AN WLD+L ++G  + D EL D I+E+
Sbjct: 894  GELALIKYFQSSVFKAFLKGESRAEAYEHAAKEANYWLDVLFSKGASLPDYELFDLIAEN 953

Query: 1006 STMSKSLADYGEQKSCAVTTARRLSDFLGDTMVKDKGLRCQYIVACEPQGTPVSERAVPV 1065
             +MSK L DYGEQKS +++TA+RL++FLGD MVKD GL C++I++  P   PV++RA+P+
Sbjct: 954  RSMSKKLDDYGEQKSTSISTAKRLAEFLGDDMVKDVGLACRFIISKMPLDAPVAQRAIPL 1013

Query: 1066 AIFETDAEIMKFYLRKWCK----TSSDVGIRSIVDWSYYKQRLSSAIQKIITIPAAMQKV 1121
            AIF+    +   YLRKW K    T  ++ IR+I+DW YY +R  + IQKII+IPAA+Q V
Sbjct: 1014 AIFQATPNVCAHYLRKWTKDTKITKDNIDIRNIIDWEYYIERFGATIQKIISIPAALQNV 1073

Query: 1122 SNPVPRVVHPDWLYKKVREKEDKFRQRKLVDIFSSLKKDDFLNKTCNAETNLMDENVEDL 1181
             NPVPRV  PDWL  K +++++  +Q K+ +IF       F                 D+
Sbjct: 1074 PNPVPRVPFPDWLENKRQQRKNDHKQPKINEIFKKTAAPAF---------------TPDI 1118

Query: 1182 EDFPKKRRNSVNGPRPIVRCFEVNNEQKTVKTTDQVDSLRQQLEPSEVSDQQPSSQNAID 1241
            E     R  + +                   + D V         +  +D Q   + +I 
Sbjct: 1119 ESISISRATNYS-------------------SLDNV---------TFFNDSQNLEKGSIS 1150

Query: 1242 TENIDR--IVDYKGWLELKKRKWKDNLDRRKKQKLGSLRASHQANGVSESLGDMINHKEA 1299
             +  DR  ++  K  +E    +W   L  + K++    +   Q N +S+ +  +I     
Sbjct: 1151 IQKTDRWMVIQKKTIVEHGVEEWLRYLKAKWKKEREEKKRKRQ-NALSKGITPII----- 1204

Query: 1300 QRRTGVGSYFRRQETAMTRCHWQIIQLVPSSQSGVFLAWVVVEGIMVRIPITVPRLFYLN 1359
                   S   R +  M    WQII++  +   G+ + W ++   MV++ + +PR+ Y+N
Sbjct: 1205 -------SVLERGKQMMQDTVWQIIKISETPSKGLMVLWCIILDKMVKLNVRMPRIIYVN 1257

Query: 1360 SKDPIVEKFPGRRVNKTLPHGRRSFNLIEVMIDEDQFRKESKKLAALLADPEVE 1413
            +++       G  V + LP  +  FNL   +IDE  F     +L   L    +E
Sbjct: 1258 NREE--NGNSGILVKRILPRLKPVFNLRRYVIDERIFESSLNQLNKELCAMRIE 1309



 Score =  107 bits (266), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 73/253 (28%), Positives = 131/253 (51%), Gaps = 18/253 (7%)

Query: 1441 SLARYAHILWISDDGVPDLGGTSEEDECFADEVHQP---------VLTYPGAYRKVSVEL 1491
            SL    ++LW S    PDLGG  E D+   + V            V+        + VEL
Sbjct: 1556 SLINQGYVLWASPLSRPDLGG-KELDDARLNAVWSSLSVNKQSICVVNESCLETDICVEL 1614

Query: 1492 KIHHLSVNALLKSNQVNEMEGG-GLFGF------DQDMNSGPYNNELCGFDETTSSAPAF 1544
            ++  + V A+++S  + + EGG    GF        D   G Y   +  +DE  + A   
Sbjct: 1615 ELGAVDVTAIVQSASIADAEGGVDSVGFLTGTVLSADALLG-YVRSIAQYDEGAAVAGPL 1673

Query: 1545 RVVKQLIQRCLTDAVTSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAML 1604
            +V++ L+  C+ D    GN  AD ++  L RWL + H+ ++DP + R++  ++ K+  +L
Sbjct: 1674 KVLRLLLHDCIKDIHLYGNKIADQVIISLDRWLRTQHALMYDPAIVRVVDILITKLILLL 1733

Query: 1605 LAEFRKLGATIIFANFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWH 1664
            +AE  +LG  +I+A+ S++I+ T +  L  A+++ +SLL +L+   +F  + ++ + FW 
Sbjct: 1734 VAELNRLGGRVIYASNSRLIMCTKRSSLEHAQSFVNSLLLSLEEHSIFASLNVKAIKFWD 1793

Query: 1665 SLLFMDQYNYGGI 1677
             LL++D  +Y GI
Sbjct: 1794 ILLWIDTNDYIGI 1806



 Score = 75.9 bits (185), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 49/182 (26%), Positives = 80/182 (43%), Gaps = 7/182 (3%)

Query: 1804 NIHKVDAPLEFIKHVCAAFALDQNVQHDVLVMRKNLLKYVRVREFAPEAEFRDPCPSFIL 1863
            NI   D+ +  +K +     LD  V   +  +R  LL+ + V + + +  ++    S  L
Sbjct: 1892 NIDLRDSIILMVKGISHFIGLDCIVYESISKLRYQLLRMLDVNDASYDGTWQSLNVSCTL 1951

Query: 1864 PNVICSYCNDCRDLDLCRDMALLAQDWHCAMPQCGQPYDREVMENALLQIVRQRERLYHL 1923
              + C+ C    DLD+C+  A     W C  P CG+ +D   +E  L++ V Q    Y +
Sbjct: 1952 TQLFCTVCCQSNDLDICQSEA-----WIC--PSCGKHFDSFTIEQLLIERVNQLLIAYTI 2004

Query: 1924 QDLVCIRCNQVKAAHLAEQCACAGSFRCKEDASDFRSKMQIFLNIANRQGFQLLQECTSW 1983
            QDL C RC  V+  +L+  C C G        ++ R  ++    IA +     L E   W
Sbjct: 2005 QDLKCTRCGAVRRHNLSLFCDCCGVEENIISPAELRFNLETIGKIAQQHDLMCLSELCEW 2064

Query: 1984 IL 1985
             L
Sbjct: 2065 TL 2066


>gi|302418234|ref|XP_003006948.1| DNA polymerase epsilon catalytic subunit A [Verticillium albo-atrum
            VaMs.102]
 gi|261354550|gb|EEY16978.1| DNA polymerase epsilon catalytic subunit A [Verticillium albo-atrum
            VaMs.102]
          Length = 2076

 Score = 1162 bits (3005), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 596/1156 (51%), Positives = 783/1156 (67%), Gaps = 69/1156 (5%)

Query: 39   GDKRLGWLLTFASSSLEDEDTRKVYSCIDLYFVSQDGSTFKSKYKFRPYFYAATKEKMEM 98
            G +R GWL+    +++ED+      + +D YF+  DG+TFK+                  
Sbjct: 69   GRRREGWLVNVQPTAVEDDRNPGGRAALDCYFMEDDGATFKATVD--------------- 113

Query: 99   DVEAYLRRRYESQ-IADIEILEKEDLDLKNHLSGLHKSYLKISFDTVQQLMDVKKDLLHV 157
            +VE +L+R   +  +  I+ +EKEDL + NH +GL  + L  +    Q+L    +  L +
Sbjct: 114  EVEEWLKRVPATGCVKTIKRIEKEDLKVPNHFAGLPTAVLGAALSQRQRLAGGAQGHLCL 173

Query: 158  V--ERNQAKFDAAEAYESILTGKREQRPQDFLDCIVDLREYDVPYHIRFAIDNDVRCGQW 215
            +  E  +   D  EAY  + T +      D  D IVD+REYDVP          +R G+W
Sbjct: 174  LPAEEIRRNVDVMEAYAEVAT-RANASFADASDFIVDIREYDVPVPY-------IRVGKW 225

Query: 216  YDVSISSTGPLLEKRVDLLQRAEVHVCAFDIETTKLPLKFPDADYDIIMMISYMLDGQGY 275
            Y V        +    + L  A+  V A+DIET+KLPLKFPDA  D IMMISYM+DGQG+
Sbjct: 226  YFVDSKHGITSVICNEERLAMADPVVMAYDIETSKLPLKFPDAATDQIMMISYMIDGQGF 285

Query: 276  LIINRECVGEDIEDLEYTPKPEFEGYFKVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGD 335
            LI NRE V EDI D EYTPKPE+ G F + N  +E  ++  +F H++E +P +  TYNGD
Sbjct: 286  LITNREIVSEDISDFEYTPKPEYPGAFMIFNEKDEKNVIERFFEHIKEARPTVIATYNGD 345

Query: 336  YFDWPFLETRAAHHGFKMSEELGFQCD-KNQGECRAKFACHLDCFAWVKRDSYLPQGSQG 394
            +FDWPF+ETRA+ HG  M +E+G++ + ++Q +C   +  H+DCF WV RDSYLPQGS+G
Sbjct: 346  FFDWPFVETRASFHGIDMYQEIGWKKNSEDQYQC--SYGVHMDCFHWVNRDSYLPQGSRG 403

Query: 395  LKAVTKAKLGYDPLEVNPEDMVRFAKEKPQMMASYSVSDAVATYYLYMTYVHPFIFSLAT 454
            LKAVT AKLGYDP E++PE M  +A E+PQ +A YSVSDAVATYYLYM YVHPF+FSL T
Sbjct: 404  LKAVTVAKLGYDPDELDPELMTPYAAERPQTLAEYSVSDAVATYYLYMKYVHPFVFSLCT 463

Query: 455  IIPMSPDEVLRKGSGTLCEMLLMVQAYKANVICPNKHQSDPEKFYRNHLLESETYIGGHV 514
            I+P+  D+ LRKG+GTLCEMLLMVQAY+  ++ PNKH +  E F+  HLL+SETY+GGHV
Sbjct: 464  ILPLGGDDTLRKGTGTLCEMLLMVQAYERKIVLPNKHMAPKEAFWDGHLLDSETYVGGHV 523

Query: 515  ECLESGVFRSDLPTSFKLDPSAYEQLLNNLDRDLQYAIKVEGKMDLESVSNYDEVKNAIM 574
            E +E+                            L++ I+VE K  +  V NY+EVK  + 
Sbjct: 524  ESIEAA---------------------------LRFTIEVEEKKSMADVENYEEVKAQVA 556

Query: 575  EKLLRLQEEPIREECPLIYHLDVAAMYPNIILTNRLQPPSIVTDEVCTACDFNRPGKTCL 634
             +L  L+E P R E PLIYHLDVA+MYPNI+ TNRLQP S+V +  C ACDFNRPGKTC 
Sbjct: 557  ARLQALKETPNRMERPLIYHLDVASMYPNIMTTNRLQPDSMVQESDCAACDFNRPGKTCD 616

Query: 635  RKLEWVWRGEIFMGKRSDYYHLKKQIESEFVDGTNGHLS-KSFLDLPKMEQQSRLKDRLK 693
            R+L W WRGE    KR +Y  ++  +ESE   G   +   + F DL + EQ + ++ RL+
Sbjct: 617  RRLPWSWRGEYIPAKRDEYNMIRNALESEKFPGKYPNSPMRPFQDLSQDEQTALIRKRLQ 676

Query: 694  KYCQKAYKRVLDKPVTELREAGICMRENSFYVDTVRSFRDRRYEYKGLNKVWKGKLSEAK 753
             Y QK Y ++ D  +   +EA IC REN FY++TVR FRDRRY+YKG  KVWKGK    K
Sbjct: 677  MYSQKIYHKIHDSTIIT-KEAIICQRENPFYINTVRDFRDRRYDYKGKAKVWKGKTEALK 735

Query: 754  ASG-NSIKIQEAQDMVVLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKI 812
            +SG +S +++ A+ M++L+DSLQLAHK ILNSFYGYVMRKG+RWYS+EMAGV   TGA I
Sbjct: 736  SSGASSTEVEAAKKMIILFDSLQLAHKVILNSFYGYVMRKGSRWYSLEMAGVTCLTGATI 795

Query: 813  IQNARLLIEKIGKPLELDTDGIWCVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVAR 872
            IQ AR L+E++G+PLELDTDGIWC+LP +FPENF+FK K   KK+T+SYPCVMLN  V  
Sbjct: 796  IQLARGLVERLGRPLELDTDGIWCMLPATFPENFSFKMKG-GKKVTVSYPCVMLNHLVHA 854

Query: 873  NNTNDQYQTLVDPVSKTYETHSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDG 932
              TN QYQTLVD  +  YETHS+ SI FEVDGPYKAM+LP SKEE   +KKRYAVFNDDG
Sbjct: 855  KFTNHQYQTLVDEKTFKYETHSDNSIFFEVDGPYKAMVLPTSKEEDKNLKKRYAVFNDDG 914

Query: 933  TLAELKGFEIKRRGELKLIKVFQAELFDKFLHGSTIEECYSAVAAVANRWLDLLDNQGKD 992
            +LAELKGFE+KRRGELKLIK+FQ ++F  FL G+T+ ECY+AVA VANRWLD+L ++G  
Sbjct: 915  SLAELKGFEVKRRGELKLIKIFQQQIFKFFLEGTTLAECYTAVAKVANRWLDILHSKGAS 974

Query: 993  IADSELIDYISESSTMSKSLADYGEQKSCAVTTARRLSDFLGDTMVKDKGLRCQYIVACE 1052
            + D EL++ ISE+ +MSK+L +YG QKS ++TTA+RL+DFLG+ MVKDKGL C++I+   
Sbjct: 975  LEDEELMELISENRSMSKTLEEYGSQKSTSITTAKRLADFLGEQMVKDKGLNCKFIICAR 1034

Query: 1053 PQGTPVSERAVPVAIFETDAEIMKFYLRKWCKTS-SDVGIRSIVDWSYYKQRLSSAIQKI 1111
            P+  PV+ERAVPVAIF  + +  + YL+KW K   +D   R+++DW YY +RL S IQK+
Sbjct: 1035 PKNAPVTERAVPVAIFSAEEQTKRAYLKKWLKEEPADTDPRALLDWDYYLERLGSVIQKL 1094

Query: 1112 ITIPAAMQKVSNPVPRVVHPDWLYKKVREKEDKFRQRKLVDIFSSLKKDDFLNKTCNAET 1171
            ITIPAA+QKV NPVPRV HPDWL +++  K+DK +Q+K+ D+F+    +D         T
Sbjct: 1095 ITIPAALQKVRNPVPRVPHPDWLQRRINIKDDKMKQKKMTDMFTKGPLEDI--------T 1146

Query: 1172 NLMDENVEDLEDFPKK 1187
            NL     ED+EDF  K
Sbjct: 1147 NLNGRGAEDMEDFGTK 1162



 Score =  248 bits (632), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 163/612 (26%), Positives = 293/612 (47%), Gaps = 70/612 (11%)

Query: 1408 ADPEVEVLGWQQNAAKIGMQRCAASSQWFNERISLARYAHI------------------- 1448
             D  +  LGWQ  AA+  +        W    +SLARY  +                   
Sbjct: 1486 TDSSLPPLGWQTVAARRLVGHYLGLGSWVMHLMSLARYGDVPLCNLERDDPRFLIDIAYA 1545

Query: 1449 ---------LWISDDGVPDLGGTSEEDECFADE-VHQPVLTYPGAYRKVSVELKIHHLSV 1498
                     LW S    PD  G  ++D     E V  P +  PG +  V ++L++ +L++
Sbjct: 1546 RRLQNNNVVLWWSASPRPDHAGYEKDDVTGPLETVSMPNVNKPGTFASVCIDLEVRNLAI 1605

Query: 1499 NALLKSNQVNEMEGGGLFGFDQDMNSGPYNNELCGFDETTSSAPAFRVVKQLIQRCLTDA 1558
            N +L S+ +N++EG     F+   ++G   +E+  FD   ++A    V++++++    +A
Sbjct: 1606 NTILTSSLINDLEGADSVSFNPAADAGANADEVISFDNAFANAGVL-VLREMVKAWWVEA 1664

Query: 1559 VTSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEFRKLGATIIFA 1618
               GN  AD ++QHL RW+ SP S L+D  LH  +  + +K F  L+ +FRK+G+ +IFA
Sbjct: 1665 C-KGNTMADVMVQHLVRWVESPDSFLYDRALHYYVQMMSRKAFQQLMGDFRKVGSQVIFA 1723

Query: 1619 NFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLFMDQYNYGGIP 1678
            N +++++ T K ++  A AY + ++K+++++ LF +I+LE   +W  L++ D++NYGG  
Sbjct: 1724 NSNRLLLQTTKAEVGTAYAYSNYVIKSIKSKPLFHFIDLEIKEYWDYLVWYDEFNYGG-- 1781

Query: 1679 ARADESLDDDSQ-VDIVSSWNIAEYLPKEIQDHFVLVVSEFMYIPWKHAQKLAASRASLQ 1737
                E ++ D+Q ++ +  W ++ +LP+ +Q  F            K+ Q+L     S +
Sbjct: 1782 KACQEVVEADNQNLETIMHWQMSTFLPERLQPTF------------KNGQRLTQLTPSRK 1829

Query: 1738 EGSSCTPSITVAAAENFESHIVQYVKGEISSYFTGKLLSIVRDAIHHMKKMNNDQHNSPG 1797
            + +  +    +   ++FE  +    K  IS+     LL++ +  + H +   +       
Sbjct: 1830 DPNDES---ALLLGKSFEKPL----KKTISN-----LLAVQKRELLHPELAGDYSFPVLP 1877

Query: 1798 VMQTAANIHKVDAP----LEFIKHVCAAFALDQNVQHDVLVMRKNLLKYVRVREFAPEAE 1853
                AA      A     LE +K +    +LD+N+  +  ++RK LL    VREF+  A 
Sbjct: 1878 GSHLAAYTDGAGARSGPLLELVKSLMQVLSLDRNITLEARLLRKELLAMFDVREFSKGAT 1937

Query: 1854 FRDPCPSFILPNVICSYCNDCRDLDLCRDMALLA------QDWHCAMPQCGQPYDREVME 1907
            F++P  S  +P + C  C   RD+D CRD  LL       + W C    C   YDR  +E
Sbjct: 1938 FQNPSASLKMPQLSCDVCTMARDMDFCRDADLLPDQGQTHKPWRCGF--CEAEYDRNTIE 1995

Query: 1908 NALLQIVRQRERLYHLQDLVCIRCNQVKAAHLAEQCACAGSFRCKEDASDFRSKMQIFLN 1967
              L+  V      +  QD+ C +C+ ++     E C C+G++       D   K+ ++ N
Sbjct: 1996 ERLIAQVEGFAVEWASQDVQCEKCHALRLNEFMEHCVCSGAWVESVSREDILKKVAVYGN 2055

Query: 1968 IANRQGFQLLQE 1979
            +A   G ++L+E
Sbjct: 2056 VAKFYGLRMLKE 2067



 Score = 52.0 bits (123), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 33/113 (29%), Positives = 54/113 (47%), Gaps = 11/113 (9%)

Query: 1312 QETAMTRCH------WQIIQLVPSSQSGVFLAWVVVEGIMVRIPITVPRLFYLNSK---- 1361
            Q T M + H      W ++ L  +   GV  A+V++   +  + I V R+ +LN K    
Sbjct: 1177 QTTFMHQAHNTFTNNWHLLHLKTTETPGVVNAYVLIHAKIHTVKIKVSRVVFLNLKSNDM 1236

Query: 1362 -DPIVEKFPGRRVNKTLPHGRRSFNLIEVMIDEDQFRKESKKLAALLADPEVE 1413
             D  +      +VN TLP+G  S +L ++M+ ED +  E+   + L   P VE
Sbjct: 1237 PDVDIAGCEVEQVNHTLPNGHSSTHLFKLMVPEDVYFNEADSFSTLFNHPSVE 1289


>gi|325180435|emb|CCA14840.1| DNA polymerase epsilon catalytic subunit A putative [Albugo laibachii
            Nc14]
          Length = 2560

 Score = 1151 bits (2977), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 610/1253 (48%), Positives = 817/1253 (65%), Gaps = 125/1253 (9%)

Query: 24   EEELEAKLGYDLFSEG-DKRLGWLLTFASSSLEDE--DTRKVYSCIDLYFVSQDGSTFKS 80
            E ELE   G ++++E   +RLGWLL F +S++ ++  + ++  S IDLY++ QDG  FK+
Sbjct: 176  ENELEEAGGTNIWNESCTERLGWLLNFRASTMIEKINEVKREVSTIDLYYIQQDGHGFKT 235

Query: 81   KYKFRPYFYAATKEKMEMDVEA--YLRRRYESQIADIEILEKEDLDLKNHLSGLHKSYLK 138
            +  +RPYFY    E   +   A  +L++++E  +  IE + +EDLDL NHLSG     LK
Sbjct: 236  RVVYRPYFYVRLDEHGAVAQRAILFLQKKFEGLMESIERVYREDLDLPNHLSGKKALLLK 295

Query: 139  ISFDTVQQLMDVKKDLLHVVERNQAKFDAAEAY-ESILTGKREQRPQDFLDCIV------ 191
            ++F TV  L+ V+  L  ++ RN+++  + EAY  S       Q+  D  D ++      
Sbjct: 296  LAFATVIDLIQVRNALSSLIHRNKSQQKSKEAYLSSTACTSSTQKLLDLEDLVLSDDEES 355

Query: 192  ---------------------DLREYDVPYHIRFAIDNDVRCGQWYDVSISSTGPL---- 226
                                 +LREYDVPY +R AID D+R G WY V  +   P     
Sbjct: 356  GLNATLSMQPGMGDPIEASFLELREYDVPYAMRVAIDLDLRVGSWYHVKYNHMAPYDPCH 415

Query: 227  LEKRVDLLQRAEVHVCAFDIETTKLPLKFPDADY-DIIMMISYMLDGQGYLIINRECVGE 285
            + K   L+ +AE  VCAFDIETTK PLKFPDA+  D I MISYM+D +GYLI+NRE V E
Sbjct: 416  ISKDAQLVDKAEPIVCAFDIETTKQPLKFPDANAGDQIYMISYMIDRRGYLIVNREFVSE 475

Query: 286  DIEDLEYTPKPEFEGYFKVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETR 345
             I   EYTPK  + G F+V NV+NE +LL  + +H++E +P IYVTYNGD+FDWPFLE R
Sbjct: 476  SISAFEYTPKSVYPGEFEVINVDNEQKLLEAFISHLKEARPHIYVTYNGDFFDWPFLEIR 535

Query: 346  AAHHGFKMSEELGF---------------------QCDKNQGE-----------CRAKFA 373
               H   +S  LG                      + D   GE            R    
Sbjct: 536  CQEHHIDISNALGIFKVRAGMNNKKGKRVESEGCTEDDTANGEKKVDSSNITYEYRGHAC 595

Query: 374  CHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQMMASYSVSD 433
             HLD F WVKRDSYLPQGSQGLKAVTK KLGYDP+EV+ EDM+  A+E P  MA+YSVSD
Sbjct: 596  VHLDAFCWVKRDSYLPQGSQGLKAVTKYKLGYDPVEVDAEDMLTLAQEDPMQMATYSVSD 655

Query: 434  AVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVICPNKH-- 491
            AVAT+YLY  YVH F+FSL TIIP+  ++VLRKGSGTLCE LLMV+A++ N+ICPNK   
Sbjct: 656  AVATFYLYEKYVHLFVFSLCTIIPLPSEDVLRKGSGTLCEALLMVEAFRGNIICPNKSTN 715

Query: 492  -----QSDPEKFYRN-HLLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQLLNNLD 545
                 + + EKF+R+ +LLE+ETY+GGHVECLESGVFRSDL   FK++  A + L+ NLD
Sbjct: 716  GIKWSEGEEEKFHRDMYLLENETYVGGHVECLESGVFRSDLEYDFKIETKAIDLLIENLD 775

Query: 546  RDLQYAIKVE---GKMDLES-VSNYDEVKNAIMEKLLRLQEEPIREECPLIYHLDVAAMY 601
             DL+ A++ E      D+E+ V +Y  VK+ +MEKLL L+ +P R E PLIYH DV AMY
Sbjct: 776  GDLKSALENECGIASCDVEAQVLDYSIVKSQVMEKLLSLKLKPQRRELPLIYHFDVGAMY 835

Query: 602  PNIILTNRLQPPSIVTDEVCTACDFNRP-GKT-----------------CLRKLEWVWRG 643
            PNIILTNRLQP +IVT+  C AC FN   G+T                 C R+L+WVWRG
Sbjct: 836  PNIILTNRLQPCAIVTERECAACTFNTTCGQTMLQTQTGDGDILSSSDVCQRELDWVWRG 895

Query: 644  EIFMGKRSDYYHLKKQIESEFV-----DGTNGHLSK--SFLDLPKMEQQSRLKDRLKKYC 696
            + +  ++ +Y  LK Q++ E       D  +  + K   ++ L K  Q   LK+RLK YC
Sbjct: 896  DYYPARKQEYLSLKTQVQYENFPISSKDRQDAEMIKMVPYISLSKNTQGRILKERLKSYC 955

Query: 697  QKAYKRVLDKPVT--ELREAGICMRENSFYVDTVRSFRDRRYEYKGLNKVWKGKLSEAKA 754
               YK+     +T  E R+A ICMREN FYV+TVR+FRDRRYEYK L K WK   +EA+ 
Sbjct: 956  SNVYKK---NKITREESRQATICMRENPFYVNTVRAFRDRRYEYKSLTKNWKKASAEAEK 1012

Query: 755  SGNSIKIQEAQDMVVLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQ 814
              +++ ++ AQD  ++YDSLQLAHKCILNSFYGYVMRKGARW+SMEMAGVVT+TG++II+
Sbjct: 1013 EQDALNMKYAQDKSLVYDSLQLAHKCILNSFYGYVMRKGARWHSMEMAGVVTHTGSQIIK 1072

Query: 815  NARLLIEKIGKPLELDTDGIWCVLPGSFPENFTFK-------TKDLKKKLTISYPCVMLN 867
             AR  IE+IG+PLELDTDGIWC+LP SFP+N  F+         +  +   ISYPC++LN
Sbjct: 1073 QAREWIEQIGRPLELDTDGIWCILPSSFPDNIRFQFVSSAQDPIENAQTREISYPCILLN 1132

Query: 868  VDVARNNTNDQYQTLVDPVSKTYETHSECSIEFEVDGPYKAMILPASKEEGILIKKRYAV 927
              V ++  N QY       +  ++T SECSI FE+DGPY+ M+LPAS +EG L+KKRYAV
Sbjct: 1133 ALVQKSFHNPQYHE--QDGNGVWKTRSECSIYFEIDGPYRCMVLPASTDEGRLLKKRYAV 1190

Query: 928  FNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFLHGSTIEECYSAVAAVANRWLDLLD 987
            F++DGTLAELKGFE+KRRGEL+L+K FQ+ +FD FL G+T++ECY++VAA ANRWLD+L+
Sbjct: 1191 FHEDGTLAELKGFELKRRGELELVKAFQSRVFDAFLDGTTLDECYASVAACANRWLDILE 1250

Query: 988  NQGKDIADSELIDYISESSTMSKSLADYGEQKSCAVTTARRLSDFLGDTMVKDK-GLRCQ 1046
            ++G  + DSE+++ ++E  TMS S++ YG+QKS ++TTA+RL++ LGD +++ + GL C+
Sbjct: 1251 SRGAGMHDSEVLELLTEKKTMSSSVSQYGDQKSTSLTTAKRLAELLGDDLLQGRSGLTCE 1310

Query: 1047 YIVACEPQGTPVSERAVPVAIFETDAEIMKF-YLRKWCKTSS--DVGIRSIVDWSYYKQR 1103
            YI+A +P    V+ERA+P AIF    + +K+ YLRKWCK S    + +  ++DW YY QR
Sbjct: 1311 YIIASKPSHEKVTERAIPAAIFAIQDDAVKWHYLRKWCKDSELMSINVCDLLDWEYYWQR 1370

Query: 1104 LSSAIQKIITIPAAMQKVSNPVPRVVHPDWLYKKVREKEDKFRQRKLVDIFSS 1156
             +S +QKII+IPAA Q + NPVPRV  PDW  KKVRE+  K +Q  ++    S
Sbjct: 1371 FASTVQKIISIPAAFQNIQNPVPRVALPDWTLKKVREQNAKHQQGSMLKYLVS 1423



 Score =  241 bits (614), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 172/565 (30%), Positives = 275/565 (48%), Gaps = 80/565 (14%)

Query: 1477 VLTYPGAYRKVSVELKIHHLSVNALLKSNQVNEMEGGGLFGFDQDMNS---GPYNNELCG 1533
            +++  G+Y  V VEL++  L+V ++L S+Q+  +E    F   +   S     + N    
Sbjct: 2007 LVSNAGSYPHVCVELELDGLAVCSILTSSQLALLEVDFSFCVSESGKSRLGTQHLNSETL 2066

Query: 1534 FDETTSSAPAFRVVKQLIQRCLTDAVTSGNVFADAILQHLYRWLCSPHSKL-HDPVLHRI 1592
             + +  S+ AF +++ L+     D V + N FAD +LQ +YRWLC+ H  L +D  L  +
Sbjct: 2067 LNTSEPSSVAFTLLRSLVTTLFKDFVATRNHFADYLLQQVYRWLCASHGALSYDRELVEM 2126

Query: 1593 LHKVMQKVFAMLLAEFRKLGATIIFANF--SKVIIDTGKFDLSAAKAYCDSLLKALQTRE 1650
            +  +M+K    LLAEFR+LGA +I+A+   SK++++T +  +  A++Y + +L  +  +E
Sbjct: 2127 VQLLMRKALLQLLAEFRRLGAEVIYADVGNSKILLNTKRNSMKEAQSYLNFVLTTIAKQE 2186

Query: 1651 LFEWIELEPVHFWHSLLFMDQYNYGGI-------PARADESLDDDS---QVDIVSSWNIA 1700
            LF+ ++L P  +   L F D  NYG I         +    ++DD+    + ++S WNIA
Sbjct: 2187 LFQVLQLTPKKYVSHLFFYDIENYGAIVWDTESIGPKNQAPIEDDATTMSLQVISHWNIA 2246

Query: 1701 EYLPKEIQDHFVLVVSEFMYIPWK-HAQKLAASRASLQEGSSCTPSITVAAAENFESHIV 1759
             +LP  +  +FVL+V +F+    K H Q        +++         +    + E H  
Sbjct: 2247 NFLPAGVDQYFVLLVGQFIRRYAKFHLQPKKEEIRQMED--------PIDDYFDLEMHTK 2298

Query: 1760 Q----YVKGEISSYFTGKLLSIVRDAIHHMKKMNNDQHNSPGVMQTAANIH-KVDAP-LE 1813
            Q    Y++  + SYF  K+L I+ +         ND    P      A  H  V +P LE
Sbjct: 2299 QQLPKYLQNLMRSYFANKMLRIITEI--------NDSGLGPSSFPIYAGSHLPVQSPALE 2350

Query: 1814 FIKHVCAAFALDQNVQHDVLVMRKNLLKYVRVREFAPEAEFRDPCPSFILPNVICSYCND 1873
             +K V A FAL+  V  +V  +++ LL+ + V EFA  A FR+P  SFI+P VICS CN 
Sbjct: 2351 LLKSVTAVFALEPAVAIEVENVKQTLLRVLNVSEFAEVARFRNPSLSFIIPQVICSTCNL 2410

Query: 1874 CRDLDLCRDMAL------------LAQD----------------WHCAMPQCGQPYDREV 1905
            CR +D+CRD  L            L QD                WHC  P+C   YD E 
Sbjct: 2411 CRSIDVCRDPQLFQVNLVGEDANNLTQDENTAQEENVMLQIQSAWHC--PRCLTSYDLEH 2468

Query: 1906 MENALLQIVRQRERLYHLQDLVCIRCNQVKAAHLAEQCACAGSFRCKED----------- 1954
            ME  L+++V+     Y LQDL C +C+  K   +++ C C+G++   +            
Sbjct: 2469 MELLLVEMVQFTSLNYQLQDLYCYKCHLPKEHKMSQYCKCSGNYTLLQGKHQSRNQWSYL 2528

Query: 1955 ASDFRSKMQIFLNIANRQGFQLLQE 1979
              D    + I   IA +  F  LQE
Sbjct: 2529 GGDIYQTIHILSRIAEQHQFYYLQE 2553



 Score = 53.1 bits (126), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 52/197 (26%), Positives = 88/197 (44%), Gaps = 43/197 (21%)

Query: 1254 WLELKKRKWKDNLDRRKKQKLGSLRASHQANGVSESL-----------GDMINHKEAQRR 1302
            WL+ +K  WK+ L +R +     LR   + N  +E L            D +      RR
Sbjct: 1472 WLQARKYIWKEMLQKRSR-----LRMMREKNIRNERLMSSLSKRNRCKDDSLPEGRNLRR 1526

Query: 1303 TGVGSYFRRQETAMTRCH-----WQIIQLVPSSQS-GVFLAWVVVEG--IMVRIPITVPR 1354
             G   +        TR       W+++++     S G  + W++     ++ RI + VPR
Sbjct: 1527 KGTSPFMMENFVFNTRKTLANEPWELLEIFQEENSVGRLICWLITSESRLLQRIELKVPR 1586

Query: 1355 LFYLN--SKDP-------IVEK---FPGRRVNKTLPH------GRRSFNLIEVMIDEDQF 1396
            +FYL   +KD        ++EK      +RV++TLPH            L+E+ + E+Q+
Sbjct: 1587 VFYLECIAKDEEEDERLQMLEKRLASVAKRVHRTLPHDGGQSQSTEGLVLLELRLSEEQY 1646

Query: 1397 RKESKKLAA-LLADPEV 1412
            +K+ K+L   +LADP V
Sbjct: 1647 QKKQKQLIPDILADPLV 1663


>gi|300121938|emb|CBK22512.2| unnamed protein product [Blastocystis hominis]
          Length = 1936

 Score = 1143 bits (2956), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 579/1237 (46%), Positives = 813/1237 (65%), Gaps = 63/1237 (5%)

Query: 32   GYDLFSEGDKRLGWLLTFASSSLEDEDTRKVYSCIDLYFVSQDGSTFKSKYKFRPYFYAA 91
            GY+ FS G KRLGWLL   ++++    +    S +D +F+ Q+G+ FKS   +RPYFY A
Sbjct: 209  GYETFSSGPKRLGWLLNLVNTTVPKIGSPD-QSGLDCFFIEQNGNLFKSTLIYRPYFYIA 267

Query: 92   TKEKMEMDVEAYLRRRYESQIADIEILEKEDLDLKNHLSGLHKSYLKISFDTVQQLMDVK 151
            TK+  E  V  YL R+Y  Q++++ I+EK DLD   H+ G   +YL++ F  V  LM+V+
Sbjct: 268  TKKNREKLVAGYLERKYRQQLSEVVIIEKLDLDKIEHIVGDKSTYLRLLFHNVSDLMEVR 327

Query: 152  KDLLHVVERNQAKFDAAEAYESILTGKREQRPQDFLDCIVDLREYDVPYHIRFAIDNDVR 211
             D+ + V++N +     E  ES      +   +D    I+D+RE+DVPY  R  ID ++R
Sbjct: 328  SDIQYFVKKNTSSDLVIEPDES-----DDLSSEDPTSAILDIREFDVPYLARVCIDLNIR 382

Query: 212  CGQWYDVSISSTGPLLEKRVDLLQRAEVHVCAFDIETTKLPLKFPDADYDIIMMISYMLD 271
             G WY+V     G  L ++  +L  +   V AFDIET+K PLKFPDA  D I MIS M+D
Sbjct: 383  VGCWYEVVPEPAGIRLLRQEHILTPSNPKVFAFDIETSKAPLKFPDATKDAIYMISIMID 442

Query: 272  GQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNVNNEIELLRLWFAHMQEVKPGIYVT 331
            GQG LIINRE V +DI D E+TP P+++G F V N  +E +LLR ++A ++  KP I+VT
Sbjct: 443  GQGVLIINREIVSKDISDFEFTPHPDYKGPFHVFNEPSEEQLLRRFYAIIETEKPNIFVT 502

Query: 332  YNGDYFDWPFLETRAAHHGFKMSEELGFQCDKNQGECRAKFACHLDCFAWVKRDSYLPQG 391
            +NGD+FDWPF+  R+  +G  + EELG +  +  GE R + + HLD FAWVKRDSYLP G
Sbjct: 503  FNGDFFDWPFVRDRSQLYGINLQEELGIR--EVNGEFRGRASVHLDAFAWVKRDSYLPHG 560

Query: 392  SQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQMMASYSVSDAVATYYLYMTYVHPFIFS 451
            SQGLKAVTKAKLG+DP+E+N EDM+RFA E P  MASYSVSDAV+TYYLYM YVH FI+S
Sbjct: 561  SQGLKAVTKAKLGFDPIEINAEDMLRFAVEDPFYMASYSVSDAVSTYYLYMKYVHLFIYS 620

Query: 452  LATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVICPNKHQSDPEKFYRNHLLESETYIG 511
            L T++P++ ++VLRKGSGTLCEMLLMV+++   +I PNK    P +F+  HLLES++YIG
Sbjct: 621  LCTVLPLNAEDVLRKGSGTLCEMLLMVESFNNGIIYPNKQIESPLRFFDGHLLESDSYIG 680

Query: 512  GHVECLESGVFRSDLPTSFKLDPSAYEQLLNNLDRDLQYAIKVEGKMDLESVSNYDEVKN 571
            G VECLESGV+R+DLP+ F +D SA+E+L+  +D+ L ++I++E  +    ++NYDE++ 
Sbjct: 681  GTVECLESGVYRNDLPSDFAMDASAFEELIAAVDQMLTFSIEMENGLRRHDIANYDEIRQ 740

Query: 572  AIMEKLLRLQEEPIREECPLIYHLDVAAMYPNIILTNRLQPPSIVTDEVCTACDFNRPGK 631
             ++  L  L++ P R E P+IYHLDV AMYPNIIL+NRLQP +I   E C +C +     
Sbjct: 741  KLVYMLELLRDRPTRRETPVIYHLDVGAMYPNIILSNRLQPSAITCKERCASCPYRSEES 800

Query: 632  TCLRKLEWVWRGEIFMGKRSDYYHLKKQIESEFVDGTNGHLSKSFLDLPKMEQQ--SRLK 689
             CLR + W WRGE F  KR ++ HL+ Q +               LD P+ E+   + LK
Sbjct: 801  NCLRAMAWRWRGEYFPLKRQEFDHLRSQYQ---------------LDKPQNEEALPAELK 845

Query: 690  DRLKKYCQKAYKRVLDKPVTELREAGICMRENSFYVDTVRSFRDRRYEYKGLNKVWKGKL 749
             R+++YC+  Y +  +  + E+REA IC RE+ FYV+T+++FRDRRYE+ GL    + + 
Sbjct: 846  RRVREYCRTVYGKQKETKI-EMREAWICQREHPFYVNTIKAFRDRRYEW-GLGPEMRSRY 903

Query: 750  SEAKASGNSIKIQEAQDMVVLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTG 809
             +       + +++A+ +V+LYDSLQLAHKCILNSFYGYVMRKGARW S++MAGV T+ G
Sbjct: 904  KKL----TKVAVKKAKSLVLLYDSLQLAHKCILNSFYGYVMRKGARWRSIQMAGVTTHLG 959

Query: 810  AKIIQNARLLIEKIGKPLELDTDGIWCVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVD 869
              II  AR L+E++G+PLELDTDGIWC+LP SFP++F +KTKD  K+  ++YPC MLN  
Sbjct: 960  GTIITGARKLVERVGRPLELDTDGIWCILPHSFPQSFKWKTKD-GKEFPMAYPCTMLNYQ 1018

Query: 870  VARNNTNDQYQTLVDPVSKTYETHSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFN 929
            V +  TN QYQT +D V   + T SE SI FE+DGPY+AM+LPAS EEG L+KKRYAVFN
Sbjct: 1019 VHKLYTNHQYQTEIDSVHHVFNTRSENSIFFELDGPYRAMVLPASTEEGRLLKKRYAVFN 1078

Query: 930  DDGTLAELKGFEIKRRGELKLIKVFQAELFDKFLHGSTIEECYSAVAAVANRWLDLLDNQ 989
             DG++AELKGFE+KRRGEL++IK+FQ ++F++FL GS ++ECY  VA +AN WLD+L  +
Sbjct: 1079 LDGSMAELKGFEMKRRGELQIIKIFQTQVFERFLLGSNLKECYQEVAKIANYWLDVLFRK 1138

Query: 990  GKDIADSELIDYISESSTMSKSLADYGEQKSCAVTTARRLSDFLGDTMVKDKGLRCQYIV 1049
            G+ + D EL++ ISES +MS+ + +YG+QKS ++TTARRL++FLG+ M++  G     I+
Sbjct: 1139 GEGLEDEELLELISESKSMSRKIEEYGKQKSTSLTTARRLAEFLGNEMIQSAGTTSNMII 1198

Query: 1050 ACEPQGTPVSERAVPVAIFETDAEIMKFYLRKWCKTSS--DVGIRSIVDWSYYKQRLSSA 1107
            +  P G PV+ERA+P  IF T+++I  ++LRKW   SS  D  IR+ +DW YY  R S+ 
Sbjct: 1199 SRFPAGQPVTERAIPTPIFNTESKIRNYFLRKWSHDSSITDFDIRNFIDWDYYIDRFSNT 1258

Query: 1108 IQKIITIPAAMQKVSNPVPRVVHPDWLYKKVREKEDKFRQRKLVDIFSSLKKDDFLNKTC 1167
            IQKIITIPA +Q + NP+ RV  PDWL + +        Q K+   FS       ++K  
Sbjct: 1259 IQKIITIPAGIQNIDNPIDRVKEPDWLKRLMERNRSSANQSKISGFFS-------VSKIP 1311

Query: 1168 NAETNLMDENVEDLEDFPKKRRNSVNGPRPIVRCFEVNNEQKTVKTTDQVDSLRQQLEPS 1227
                      + + E   +     +  P  I    E+    +TV+T              
Sbjct: 1312 AGVKTAKKAPIGESEKPRESEAAEIESPNEINEINEIKEINETVET-------------- 1357

Query: 1228 EVSDQQPSSQNAIDTENIDRIVDYKGWLELKKRKWKD 1264
             V  ++P +       ++ R  D+  WL  +KR+W++
Sbjct: 1358 -VETEKPRA-------SVKRNADFPAWLAERKRQWRE 1386



 Score = 62.4 bits (150), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 54/236 (22%), Positives = 90/236 (38%), Gaps = 56/236 (23%)

Query: 1408 ADPEVEVLGWQQNAAKIGMQRCAASSQWFNERISLARYAHI------------------- 1448
            A+  V  L W++  A I ++  A S   F++RI  ARYA I                   
Sbjct: 1712 AEGHVGELTWRRELAGIAIRAFAESFTSFHDRIQCARYARIPAGNVASDMSTQINDVLFA 1771

Query: 1449 ---------LWISDDGVPDLGGTSEED----------ECFADEVHQPVLTYPGAYRKVSV 1489
                     LW S    PD GG S             +C       P +   G  R    
Sbjct: 1772 RYLTANKCILWCSPRETPDFGGVSLRGLGGRFMFGGFKCVDWVGSIPAVNESGLVRSFVF 1831

Query: 1490 ELKIHHLSVNALLKSNQVNEMEGGGLFGFDQDMNSGPYNNELCGFDETTSSAPAFRVVKQ 1549
            ++ +H++ +NA+ + +Q+    GG +   D          + CG          F V++ 
Sbjct: 1832 DVSVHNVVLNAIRQCDQLQCSLGGDVVSAD----------DRCGH--------VFEVLRL 1873

Query: 1550 LIQRCLTDAVTSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLL 1605
             +   L D V   +  A+  L HL+RWL    +    P+L R++H++ + +   +L
Sbjct: 1874 FVAGLLQDVVAEHSSIANFALMHLHRWLLCRQALCFHPLLLRVVHRLTKILLNSVL 1929


>gi|402592006|gb|EJW85935.1| DNA polymerase, partial [Wuchereria bancrofti]
          Length = 1672

 Score = 1131 bits (2926), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 608/1345 (45%), Positives = 835/1345 (62%), Gaps = 96/1345 (7%)

Query: 82   YKFRPYFYAATKEKMEMDVEAYLRRRYESQIADIEILEKEDLDLKNHLSGLHKSYLKISF 141
            Y FRPY Y AT    E  V +YL ++Y + I    I+EKEDLDLKNHLSGL ++YLKISF
Sbjct: 3    YPFRPYLYIATLPSFEHQVLSYLSKKYANVIT-TNIVEKEDLDLKNHLSGLKRTYLKISF 61

Query: 142  DTVQQLMDVKKDLLHVVERNQAKFDAAEAYESILTGKREQRPQDFLDCIVDLREYDVPYH 201
             ++ +L+  KKD+  +++RNQ +     +Y ++LT                 RE+D+PY 
Sbjct: 62   PSLSELLKFKKDITPILKRNQEREKQTTSYTNLLT-----------------REHDLPYQ 104

Query: 202  IRFAIDNDVRCGQWYDVSISSTG--PLLEKRVDLLQRAEVHVCAFDIETTKLPLKFPDAD 259
            +R  ID +V  G WY V+       P + +   L+   E  + A+DIE TKLPLKFPD+ 
Sbjct: 105  MRVCIDLEVFVGLWYRVTGRDLDRKPKITRHPTLIDPPEPIILAYDIEVTKLPLKFPDST 164

Query: 260  YDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNVNNEIELLRLWFA 319
            +D IMMISYM++G G+LIINR+ +  D++D EYTP+PE++G F+V N+ +E  +++ +F 
Sbjct: 165  FDEIMMISYMVNGNGFLIINRQIISSDVDDFEYTPRPEYKGIFRVINLPDEKAVIKYFFD 224

Query: 320  HMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDKNQGECRAKFACHLDCF 379
            H+  ++P ++VTYNGD FDWPF+E RAA H   M  E+G     + GE RA  A HLD F
Sbjct: 225  HIIRLRPTVFVTYNGDSFDWPFVEARAAVHNLNMQTEIGVS-KNSSGEYRAANAVHLDAF 283

Query: 380  AWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQMMASYSVSDAVATYY 439
             WVKRDSYLP GSQ LKA TKAKL YDP+E++PE M   AK++PQ +A+YSVSDAVATYY
Sbjct: 284  KWVKRDSYLPVGSQNLKACTKAKLRYDPVELDPEQMCAMAKDEPQTLANYSVSDAVATYY 343

Query: 440  LYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVICPNKHQSDPEKFY 499
            LY+ YVHPFIF+L TIIP+ PD+VLRKGSGTLCE LLMV+A++ N+I PNK      K+ 
Sbjct: 344  LYIKYVHPFIFALCTIIPLGPDDVLRKGSGTLCEALLMVKAFQNNIIFPNKLLHYGTKYT 403

Query: 500  RN-HLLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQLLNNLDRDLQYAIKVEGKM 558
             + H++ESETY+GGHVE LESGVFR+D+P  F++ P+A   L  N+ + L  ++  E  +
Sbjct: 404  SDGHVIESETYVGGHVEALESGVFRADIPEKFRIVPAAVLDLKRNVRKTLSDSLIREFGV 463

Query: 559  DLESVSNYDEVKNAIMEKLLRLQEEPIREECPLIYHLDVAAMYPNIILTNRLQPPSIVTD 618
             ++ V ++D V + +  +L    + P+R E P IYHLDV AMYPNIILTNRLQP ++VT+
Sbjct: 464  TMDEVIDFDSVVSKVETQLDDFIKRPLRLETPKIYHLDVGAMYPNIILTNRLQPSAVVTN 523

Query: 619  EVCTACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYYHLKKQIESEFVDGTNGHLSKSFLD 678
            E C AC +N P   C R + W WRGEI    R +Y  + +Q+E+E    T G   + F  
Sbjct: 524  EDCIACVYNSPDAKCQRTMRWEWRGEIMPASRGEYERILQQLENE----TFGKPPRPFHS 579

Query: 679  LPKMEQQSRLKDRLKKYCQKAYKRV-LDKPVTELREAGICMRENSFYVDTVRSFRDRRYE 737
            L   ++      R+K +C++AY +  + K   E R   IC REN+FYVDTV++FRDRRYE
Sbjct: 580  LDHEQRVQIEAKRIKDFCKRAYGKTHITK--NEYRYTTICERENAFYVDTVKAFRDRRYE 637

Query: 738  YKGLNKVWKGKLSEAKASGNSI-KIQEAQDMVVLYDSLQLAHKCILNSFYGYVMRKGARW 796
            YK + K  K K    + S + I  ++ AQ  +VLY+SLQLAHKCILNSFYGYVMRKGARW
Sbjct: 638  YKAMLKASKAKAVLDEVSEDDIHALKTAQGRIVLYESLQLAHKCILNSFYGYVMRKGARW 697

Query: 797  YSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLPGSFPENFTFKTKDLKKK 856
            +SMEMAG+V +TGA II  AR L+E+IGKPLELDTDGIWC++PG+FPEN TF     K+K
Sbjct: 698  FSMEMAGIVCHTGANIITEARKLVERIGKPLELDTDGIWCLIPGTFPENITFTLNSSKRK 757

Query: 857  -LTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEFEVDGPYKAMILPASK 915
             +T+SYP  +LN  +    TN+Q+  L +P   TY   SE SI FEVDGPY AMILPAS+
Sbjct: 758  TVTVSYPGAILNALIHDKFTNNQFHQL-EP-DGTYSVTSENSIFFEVDGPYLAMILPASR 815

Query: 916  EEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFLHGSTIEECYSAV 975
            EEG  +KKRYAVFN DG+LAELKGFE+KRRGEL LIK FQ+ +F  FL G +  E Y   
Sbjct: 816  EEGKKLKKRYAVFNFDGSLAELKGFEVKRRGELALIKYFQSSVFKAFLKGKSHAEAYEHA 875

Query: 976  AAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLADYGEQKSCAVTTARRLSDFLGD 1035
            A  AN WLD+L ++G  + D EL D I+E+ +MSK L DYGEQKS +++TA+RL++FLGD
Sbjct: 876  AKEANYWLDVLFSKGASLPDYELFDLIAENRSMSKKLDDYGEQKSTSISTAKRLAEFLGD 935

Query: 1036 TMVKDKGLRCQYIVACEPQGTPVSERAVPVAIFETDAEIMKFYLRKWCK----TSSDVGI 1091
             MVKD GL C++I++  P   PV++RA+P+AIF+    +   YLRKW K    T  ++ I
Sbjct: 936  DMVKDVGLACRFIISKMPLDAPVAQRAIPLAIFQAAPNVSAHYLRKWTKDTTITKDNIDI 995

Query: 1092 RSIVDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLYKKVREKEDKFRQRKLV 1151
            R+I+DW YY +R  + IQKII+IPAA+Q V NPVPRV  PDWL  K +++++  +Q K+ 
Sbjct: 996  RNIIDWEYYIERFGATIQKIISIPAALQNVPNPVPRVPFPDWLENKRKQRKNDHKQPKIN 1055

Query: 1152 DIFSSLKKDDFLNKTCNAETNLMDENVEDLED--FPKKRRNSVNGPRPIVRCFEVNNEQK 1209
            +IF       F      + +N    N   L++  F    RN   G  P            
Sbjct: 1056 EIFKKTAAPAF-TPDIESISNSRATNCSSLDNVTFLNNSRNLEEGSTP------------ 1102

Query: 1210 TVKTTDQVDSL-RQQLEPSEVSDQQPSSQNAIDTENIDRIVDYKGWLELKKRKWKDNLDR 1268
             ++ TDQ   + ++QL   E+ +                     G + +   KW      
Sbjct: 1103 -IQKTDQWMVIQKKQLLNMELKNGY-------------------GIVFVFLAKW------ 1136

Query: 1269 RKKQKLGSLRASHQANGVSESLGDMINHKEAQRRTGVGSYFRRQETAMTRCHWQIIQLVP 1328
               QK    +   + N +S+ +            T + S   R +  M    WQII++  
Sbjct: 1137 ---QKEREEKKRRRQNALSKGI------------TPIMSVLERGKQMMQDTVWQIIKISE 1181

Query: 1329 SSQSGVFLAWVVVEGIMVRIPITVPRLFYLNSKDPIVEKFPGRRVNKTLPHGRRSFNLIE 1388
            +   G+ + W ++   MV++ + +PR+ Y+N+++       G  V + LP  +  FNL  
Sbjct: 1182 TPSKGLLVLWCMILDKMVKLNLRMPRIIYVNNREE--NGNSGILVKRILPRLKPVFNLRR 1239

Query: 1389 VMIDEDQFRKESKKLAALLADPEVE 1413
             +IDE  F     +L   L    +E
Sbjct: 1240 YVIDERIFESSLNQLNKELCAMRIE 1264



 Score = 65.9 bits (159), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 50/183 (27%), Positives = 86/183 (46%), Gaps = 18/183 (9%)

Query: 1441 SLARYAHILWISDDGVPDLGGTSEEDECFADEVHQP---------VLTYPGAYRKVSVEL 1491
            SL    ++LW S    PDLGG  E D+   + V            V+        + VEL
Sbjct: 1492 SLINQGYVLWASPLSRPDLGG-KELDDARLNAVWSSLSVNKQSVCVVNESCFETDICVEL 1550

Query: 1492 KIHHLSVNALLKSNQVNEMEGG-GLFGF------DQDMNSGPYNNELCGFDETTSSAPAF 1544
            ++  + V A+++S  + + EGG    GF        D   G Y   +  +DE  + A   
Sbjct: 1551 ELGAVDVTAIVQSASIADAEGGVDSVGFLTGTVLSADALLG-YVRSIAQYDEGAAVAGPL 1609

Query: 1545 RVVKQLIQRCLTDAVTSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAML 1604
            +V++ L+  C+ D    G+  AD ++  L RWL + H+ ++DP + R++  ++ K+   L
Sbjct: 1610 KVLRLLLHDCIKDIHLYGSKIADQVIISLDRWLRTQHALMYDPAIVRVVDILITKLILFL 1669

Query: 1605 LAE 1607
            +AE
Sbjct: 1670 VAE 1672


>gi|339232932|ref|XP_003381583.1| DNA polymerase family B, exonuclease domain protein [Trichinella
            spiralis]
 gi|316979593|gb|EFV62363.1| DNA polymerase family B, exonuclease domain protein [Trichinella
            spiralis]
          Length = 2148

 Score = 1122 bits (2902), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 567/1152 (49%), Positives = 779/1152 (67%), Gaps = 44/1152 (3%)

Query: 21   RSAEEELEAKLGYDLFSEGDKRLGWLLTFASSSLEDEDTRKVYSCIDLYFVSQDGSTFKS 80
            RS    ++++ GYD+     ++  WL+   ++ + +++ R + S ++ YF+  DG+ FK 
Sbjct: 16   RSIRSAIDSRFGYDICDGKVEKAAWLINMHATEISNKNGR-MESAMEYYFLQADGTKFKL 74

Query: 81   KYKFRPYFYAATKEKMEMDVEAYLRRRYESQIADIEILEKEDLDLKNHLSGLHKSYLKIS 140
             Y +RPYF+ + +E  E D    + + +   +   EI+EK DLD  NHLSGL + Y+K+ 
Sbjct: 75   LYSYRPYFFVSVREGSEADFVVMVTKLFAGLVDSAEIVEKNDLDQTNHLSGLRRLYVKLY 134

Query: 141  FDTVQQLMDVKKDLLHVVERNQAKFDAAEAYESILTGKREQRP--QDFLDCIVDLREYDV 198
            F     L+ V+ ++++ VE N+    +   + S  T         Q+ L+ ++D+REYD+
Sbjct: 135  FLNTSDLVKVRNEIMYKVEDNKKVISSQWLFSSANTDSEFSNAGFQERLESVLDIREYDI 194

Query: 199  PYHIRFAIDNDVRCGQWYDVSISSTGPL--LEKRVDLLQRAEVHVCAFDIETTKLPLKFP 256
            PY+IR  ID  +  G WYD+S ++ G +  +E   D + R E  V AFDIETTK PLKFP
Sbjct: 195  PYYIRATIDLKIFVGLWYDIS-ATNGKITKIEPIRDRINRPEPCVLAFDIETTKAPLKFP 253

Query: 257  DADYDIIMMISYMLDGQ-GYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNVNNEIELLR 315
            D+  D IMMISYM++GQ G+LIINRE V ED+ED EY+PKPEFEG+F V N  NE  LL 
Sbjct: 254  DSSCDEIMMISYMINGQVGFLIINREVVSEDVEDFEYSPKPEFEGHFSVFNEANEQSLLL 313

Query: 316  LWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDKNQGECRAKFACH 375
             +F   Q+  P I VTYNGD FDWPF+E RA   G  M   LGF+ + + GE +++ + H
Sbjct: 314  RFFGEFQKYAPDIVVTYNGDAFDWPFVEARATACGLDMYTSLGFRRNAS-GEYKSRQSSH 372

Query: 376  LDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQMMASYSVSDAV 435
            +D F WVKRDSYLP GS  LKA  + KL YDP+E++PE++V  A+ KPQ +A+YSVSDAV
Sbjct: 373  MDAFKWVKRDSYLPMGSHNLKACARIKLRYDPVELDPEELVPMARSKPQAVANYSVSDAV 432

Query: 436  ATYYLYMTYVHPFIFSLATIIPMSPDEV-----LRKGSGTLCEMLLMVQAYKANVICPNK 490
            ATYYLYM YVHPF F+L TIIPM+PD+V     LRKGSGTLCE LLMVQAY++N+I PNK
Sbjct: 433  ATYYLYMIYVHPFTFALCTIIPMNPDDVCNLTVLRKGSGTLCEALLMVQAYQSNIIFPNK 492

Query: 491  HQSDPEKFYRN-HLLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQLLNNLDRDLQ 549
              +D +KF  + HL+ SETY+GGHVE LE GV++SD+   F +D +  ++L+++L+  L 
Sbjct: 493  KGADVKKFTADGHLVMSETYVGGHVEALECGVYKSDIACQFDVDLTTVQKLMDDLENTLL 552

Query: 550  YAIKVEGKMDLESVSNYDEVKNAIMEKLLRLQEEPIREECPLIYHLDVAAMYPNIILTNR 609
            Y+++ +  + L+ + N+ EV N I EKL  L++ P R E PLIYHLDV AMYPNIILTNR
Sbjct: 553  YSLQADS-VTLDQIDNFTEVCNEIKEKLQSLKDSPSRHETPLIYHLDVGAMYPNIILTNR 611

Query: 610  LQPPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYYHLKKQIESEFVDGTN 669
            LQPP+IV + VC  CDFNRPG  C                +S+Y  + +Q+  E +   +
Sbjct: 612  LQPPAIVNESVCAVCDFNRPGAKCR-----------LPANKSEYQWIMQQLNKEKLSTAS 660

Query: 670  GHLSKSFLDLPKMEQQSRLKDRLKKYCQKAYKRVLDKPVTELREAGICMRENSFYVDTVR 729
               S+ F  L   E+      RLK+YC+KAY R  D   TE+++  +C RENSFYVDT+R
Sbjct: 661  NSSSRHFHHLSDDEKSEFENKRLKEYCRKAYGRNHDFR-TEVKKTLVCQRENSFYVDTIR 719

Query: 730  SFRDRRYEYKGLNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHKCILNSFYGYV 789
            +FRDRRYEYK L K  K KL+EA A+ N  +I++ +   VLYDSLQLAHK          
Sbjct: 720  AFRDRRYEYKCLLKSAKKKLAEATAACNFEQIKDFKASCVLYDSLQLAHK---------- 769

Query: 790  MRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLPGSFPENFTFK 849
                +RW+SMEMAG+V +TGA II+ +R LI+KIG+PLELDTDGIWC+LP SFPE   FK
Sbjct: 770  ----SRWHSMEMAGIVCHTGAMIIKKSRELIDKIGRPLELDTDGIWCILPSSFPEQAIFK 825

Query: 850  TKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEFEVDGPYKAM 909
             +D   K+T+SYP  +LN+ V++  TNDQY  L++  + +Y+  SE +I FEVDGPYKA+
Sbjct: 826  LRDGGGKVTVSYPAALLNMMVSQCFTNDQYHELINQSTLSYKVRSENTIAFEVDGPYKAI 885

Query: 910  ILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFLHGSTIE 969
            +LP+SKEEG  +KKRYAV+N DG++AELKGFEIKRRGEL+LIK+FQ+ +FD FL GS++E
Sbjct: 886  VLPSSKEEGKKLKKRYAVYNFDGSIAELKGFEIKRRGELQLIKIFQSAVFDGFLKGSSLE 945

Query: 970  ECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLADYGEQKSCAVTTARRL 1029
            E Y +VA VAN WLDLL ++  DI D+EL D ISE+ ++SK + +YG QKS  +  A+RL
Sbjct: 946  EVYGSVAEVANYWLDLLYSKAVDITDAELFDLISENRSLSKKIEEYGNQKSAPIIAAKRL 1005

Query: 1030 SDFLGDTMVKDKGLRCQYIVACEPQGTPVSERAVPVAIFETDAEIMKFYLRKW---CKTS 1086
            ++FLGD M+K+ GL C+ ++  EP+G P SERAVPVAIF+ DA I + +L++W   C  S
Sbjct: 1006 AEFLGDEMIKNSGLNCRTVILKEPRGAPTSERAVPVAIFQADANIARHFLKRWLKRCDFS 1065

Query: 1087 SDVGIRSIVDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLYKKVREKEDKFR 1146
             +  IR I+DW YY  RL S I K+I+IPAA+Q V+NPVPR+  PDW+  KV   ++  +
Sbjct: 1066 ENFDIREIIDWDYYIDRLGSTILKLISIPAAIQGVTNPVPRIPLPDWVRNKVAVTDNSRK 1125

Query: 1147 QRKLVDIFSSLK 1158
            Q +L D+F  ++
Sbjct: 1126 QVRLNDLFRPMQ 1137



 Score =  228 bits (581), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 154/549 (28%), Positives = 265/549 (48%), Gaps = 71/549 (12%)

Query: 1442 LARYAHILWISDDGVPDLGGTSEEDECF---ADEVHQPVLTYPGAYRKVSVELKIHHLSV 1498
            L +  H+LW S+  VPD GG   +D      +D+     +   G Y+ ++ EL I  L +
Sbjct: 1589 LCKSGHVLWCSNSDVPDFGGKETDDHRLNVDSDDAVDSQINRAGFYKNITFELNIVSLPI 1648

Query: 1499 NALLKSNQVNEMEGGGLF----------GFDQDMNSGPYNNELCGFDETTSSAPAFRVVK 1548
             A+L ++++ + +    F          G     +   YNN     DE+   + AF+V+K
Sbjct: 1649 AAVLSTSRILDFDNSEAFFKASSTTKKTGVATLHSLNSYNN-----DESILLSSAFKVMK 1703

Query: 1549 QLIQRCLTDAVTSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEF 1608
            Q++   L +     NVFAD  + H YRWL S  S L DP L R +  +M+K++ ML+AE 
Sbjct: 1704 QMVHGWLKEVTLFQNVFADNHMIHFYRWLGSTDSLLFDPCLKRAVDSLMKKLYLMLIAEL 1763

Query: 1609 RKLGATIIFANFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLF 1668
             ++G  I+ A+ ++VI+ +G+     A A+ D +L+ +Q +E+F  ++L     W+ LL+
Sbjct: 1764 DQMGLQIVHADLNRVILSSGRPKYDDAVAHVDYILRTIQNKEIFSVVDLLKSKIWNLLLW 1823

Query: 1669 MD--------QYNYGGI-----------PARADESLDDDSQVDIVSSWNIAEYLPKEI-- 1707
            +D        Q NYGG+           P RAD +  D+  + +  +W +  +LP     
Sbjct: 1824 LDEKKMKNILQNNYGGVEQCTTQGARTDPMRADTTTTDN--IGLTMNWQLLHFLPSAFNC 1881

Query: 1708 QDHFVLVVSEFMYIPWKHA--QKLAASRASLQEG------SSCTPSITVAAAENFESHIV 1759
            Q+ F ++++ ++ + +       L ++ A L         ++  P+I+    +   S  +
Sbjct: 1882 QESFKMIIAGYIMLIYNFLIDSDLQSNSADLDNNDEQMMMTTTQPTISQGLMQQKASMKL 1941

Query: 1760 QY----------VKGEISSYFTGKLLSIVRDAIHHMKKMNNDQHNSPGVMQTAANIHKVD 1809
             Y          + GE+S     KL + VR  +    K++ D   S       +++H  +
Sbjct: 1942 NYERLKQFSLELLNGELSE----KLFNTVR-KVQRAAKLHPDTVASTFPRFVGSHLHLTN 1996

Query: 1810 APLEFIKHVCAAFALDQNVQHDVLVMRKNLLKYVRVREFAPEAEFRDPCPSFILPNVICS 1869
              LE  K +C   +LD+ +  ++  ++++LL  + V EFA  AE+++P  S IL +  C 
Sbjct: 1997 PALELAKTLCKVLSLDEMIADEIYPIKRDLLAILNVGEFAEIAEWKNPSLSMILRDFPCK 2056

Query: 1870 YCNDCRDLDLCRDMALLAQD-----WHCAMPQCGQPYDREVMENALLQIVRQRERLYHLQ 1924
             CN CRDLDLCRD  L + D     W C+  +C   YD   +E  LLQ +    + Y  Q
Sbjct: 2057 QCNLCRDLDLCRDFELNSNDSETEIWRCS--RCKTVYDIGDIEFRLLQYLNNFCKSYFTQ 2114

Query: 1925 DLVCIRCNQ 1933
            DL C +C +
Sbjct: 2115 DLKCEKCQE 2123



 Score = 47.4 bits (111), Expect = 0.087,   Method: Compositional matrix adjust.
 Identities = 23/85 (27%), Positives = 45/85 (52%), Gaps = 2/85 (2%)

Query: 1321 WQIIQLVPSSQSGVFLAWVVVEGIMVRIPITVPRLFYLNSKDP--IVEKFPGRRVNKTLP 1378
            W IIQ++ + + G+F  WV +   +  + +  PR+FY+N + P  I      R+  +TLP
Sbjct: 1248 WNIIQILKNKEPGLFTLWVSIGSELHNVRLRAPRIFYVNQRIPKQIDSTDVYRKCIRTLP 1307

Query: 1379 HGRRSFNLIEVMIDEDQFRKESKKL 1403
                 ++L E  + E+++ +   +L
Sbjct: 1308 RSHPVYHLYEYEVPEEKYERHLHQL 1332


>gi|452825358|gb|EME32355.1| DNA polymerase epsilon subunit 1 [Galdieria sulphuraria]
          Length = 2012

 Score = 1115 bits (2884), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 610/1434 (42%), Positives = 858/1434 (59%), Gaps = 99/1434 (6%)

Query: 12   RRTKKQKLIRSAEEELEAKLGYD-LFSEGDKRLGWLLTFASSSLEDEDTRKVYSCIDLYF 70
            RR K+ K       +L+   G++ L S    ++GWL    ++++ED   ++V   +DL+F
Sbjct: 30   RRRKQGKF-----HKLDRDSGFEPLLSLTGSKVGWLFNAVATTVEDPTNKRVTQAVDLFF 84

Query: 71   VSQDGSTFKSKYKFRPYFYAATKEKMEMDVEAYLRRRYESQIADIEILEKEDLDLKNHLS 130
            +  DG+ F++    RPYFY   KE  E +VE  L++ +  ++  I+ +   D  + NH++
Sbjct: 85   IGADGNHFRATMICRPYFYLKVKEGSEEEVEFALKKYFRDKLYAIKQVALHDQSVPNHVA 144

Query: 131  GLHK-SYLKISFDTVQQLMDVKKDLLHVVERNQAKFDAAEAYESILTGKREQR--PQDFL 187
             + K S L I F T+ +L +V   +L  +E    +F  +       T + E++    D  
Sbjct: 145  SMTKRSLLAIEFRTMSELNEVSSFVLRRLE----EFSTSRNLLLEETKENEEKLTRSDGF 200

Query: 188  DCIVDLREYDVPYHIRFAIDNDVRCGQWYDVSI-SSTGPLLEKRVDLLQRAEVHVCAFDI 246
              I+++ EYD+    R  I  ++  G WY+V + S +  +L    ++++R +  V AFDI
Sbjct: 201  HSILEIFEYDISPISRTMISQNIHVGLWYNVRVDSKSNAVLHPLSEIVERPQPVVLAFDI 260

Query: 247  ETTKLPLKFPDADY-DIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVT 305
            ETTK PLKFPDA   D +MMIS+M+DG+GYL +NRE V  +I+D  Y+PK EF G F V 
Sbjct: 261  ETTKAPLKFPDAKTGDQVMMISWMIDGKGYLGVNREIVAANIDDFTYSPKDEFPGDFTVF 320

Query: 306  NVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDKNQ 365
            N N+E  LL  +   +Q   P I+VTYNGD FDWPF+  RA ++   + +E+G  C  NQ
Sbjct: 321  NENDERSLLLRFLDEIQLHTPQIFVTYNGDMFDWPFVFERARYYDIDIEKEIGISC--NQ 378

Query: 366  GECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQM 425
             E R +   HLDC  WV RDSYLPQGS+GLKAVT++ LGYDPLE++PE+M+  A+  PQ+
Sbjct: 379  RETRGRATIHLDCMHWVNRDSYLPQGSRGLKAVTRSLLGYDPLELDPEEMMPAARSNPQL 438

Query: 426  MASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANV 485
            +ASYSVSDAV TYYLYM YVHPFIFSL  I+P+ P++VLR+GSGTLCE LLM +AY+ ++
Sbjct: 439  LASYSVSDAVCTYYLYMRYVHPFIFSLCNIVPLPPEDVLRRGSGTLCENLLMKEAYQQDI 498

Query: 486  ICPNKHQSDPEKFYRNHLLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQLLNNLD 545
            +CPNKHQ+  EK+Y  HLLE+ETYIGGHVE L++GVFRSDL   F L       L   LD
Sbjct: 499  LCPNKHQTTLEKYYDGHLLENETYIGGHVEALQAGVFRSDLSVRFSLSEEVLGDLTRRLD 558

Query: 546  RDLQYAIKVEGKMDLESVSNYDEVKNAIMEKLLRLQEEPIREECPLIYHLDVAAMYPNII 605
              LQ+A+    K+D   V+NY ++ +++ E L  L+      + P+IYHLDV AMYPN+I
Sbjct: 559  EILQHAMN-RLKVDPSKVTNYVQLSSSLTESLKALKHTHAFNDFPVIYHLDVGAMYPNVI 617

Query: 606  LTNRLQPPSIVTDEVCTACDFNR-PGKTCLRKLEWVWRGEIFMGKRSDYYHLKKQIESEF 664
            LTNRLQP +IV+   C +C FN      C R L+W W+GE F     +      QI  + 
Sbjct: 618  LTNRLQPHAIVSKHQCASCAFNELEDSQCKRNLKWTWKGEYFPATHGE----TNQIRRDI 673

Query: 665  VDGTNGHLSKSFLDLPKMEQQSRLKDRLKKYCQKAYKRVLDKPVTELREAGICMRENSFY 724
            +   NG+       +  +      + RLK+YCQK YK+ LD   TE REA +C RE+ FY
Sbjct: 674  LSNPNGN------QVENVRSSEEFRRRLKQYCQKIYKKTLDS-YTEEREATVCQREHPFY 726

Query: 725  VDTVRSFRDRRYEYKGLNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHKCILNS 784
            V+TVR+FRDRRYEYK L K WK KL +A+ + +   I+EA+ M VLY+SLQLAHKCILNS
Sbjct: 727  VNTVRAFRDRRYEYKKLLKQWKRKLQDAQGNKDWKSIEEAKKMCVLYESLQLAHKCILNS 786

Query: 785  FYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLPGSFPE 844
            FYGYVMRK ARWYSMEMAGVVT  GA II+ AR +++ +G  LELDTDGIWC LP SFPE
Sbjct: 787  FYGYVMRKAARWYSMEMAGVVTQIGANIIRYARSVVDGVGIALELDTDGIWCALPKSFPE 846

Query: 845  NFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEFEVDG 904
               F+T D +     S+ C +LN  + +  +N QYQ+LV+   K +E  + CSIEFE DG
Sbjct: 847  KIVFQTHD-QVTYESSFICEILNYGIFQQFSNPQYQSLVNTERKEFERETVCSIEFEFDG 905

Query: 905  PYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFLH 964
            PY+AMILPASKEEG  IKKRYAVF+ DG++AELKGFE+KRRGELKLIK+FQ++LF +FL 
Sbjct: 906  PYRAMILPASKEEGKSIKKRYAVFHMDGSMAELKGFEMKRRGELKLIKIFQSDLFQRFLL 965

Query: 965  GSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLADY--GEQKSCA 1022
            G T+EECY  V   AN WL++L+ QG   ++ E+I+ ++E +TMSKSL +Y   +QKS A
Sbjct: 966  GETLEECYQKVGEAANNWLEVLETQGASCSEQEIIELLAEQNTMSKSLGEYLKLKQKSLA 1025

Query: 1023 VTTARRLSDFLGDTMVKDKGLRCQYIVACEPQGTPVSERAVPVAIFETDAEIMKFYLRKW 1082
            +TTA+RL++FLG  MV+DKGL C+Y++A +P+   V+ERA+P+ IF  +  I + +L+KW
Sbjct: 1026 ITTAKRLAEFLGPQMVRDKGLACKYVIARKPENAQVTERAIPIQIFSAEQSIRESFLKKW 1085

Query: 1083 CKT--SSDVGIRSIVDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLYKKVRE 1140
             K   S  + +R  +DW YYK+RL+S IQKIITIPAA Q V NPVPRV HP+WL  K+R+
Sbjct: 1086 LKETDSEAIQLREFLDWQYYKERLASTIQKIITIPAAFQSVENPVPRVAHPEWLSAKLRD 1145

Query: 1141 KEDKFRQRKLVDIFSSLKKDDFLNKTCNAETNLMDENVEDLEDFPKKRRNSVNGPRPIVR 1200
               + +Q  + D F+            N  +    E++ DLED              +VR
Sbjct: 1146 ISCRAKQSMVADFFAK----------SNENSGFQKESMPDLEDI------------SVVR 1183

Query: 1201 CFEVNNEQKTVKTTDQVDSLRQQLEPSEVSDQQPSSQNAIDTENIDRIVDYKGWLELKKR 1260
               ++   K ++     + + Q             +  A D  NI +   +  WL   + 
Sbjct: 1184 MLSLSQRTKQIENVSASEEMAQN-----------DNLRAEDKPNIQK--SFYSWLVYMRN 1230

Query: 1261 KWKDNLDRRKKQKLGSLRASHQANGVSESLGDMINHKEAQRRTGVGSYFRRQETAMT--- 1317
             W+  L+RR K  +  ++     N  S    D++     ++R  +  +     T  +   
Sbjct: 1231 IWR--LERRNK-VVKRVQKRQHENFESRYDKDVLPPSRQRQRKDIRRFIAPDPTVASEEF 1287

Query: 1318 --RCHWQIIQLVPSSQSGVFLAWVVVEGIMVRIP----------------ITVPRLFYLN 1359
              +    I+ +  +   G F  W     I+ R P                I+  R  Y+N
Sbjct: 1288 QLQTELHILSIQATETPGEFQIW-----ILPRFPQDTRTDKPLEKPFSCFISSKRTLYVN 1342

Query: 1360 SKDPIVEKFPGRRVNKTLPHGRRSFNLIEVMIDEDQFRKESKKLAALLADPEVE 1413
             + P       +  N  LP  R+   L +V ++E  F ++  +L  L+   EVE
Sbjct: 1343 CRQPSSRAIGPQIFNVRLPRYRKPCYLYQVEVEESAFLRQQNELNDLVPLSEVE 1396



 Score =  123 bits (308), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 81/281 (28%), Positives = 138/281 (49%), Gaps = 23/281 (8%)

Query: 1448 ILWISDDGVPDLGGTSEED------ECFADEVHQPVLTYPGAYRKVSVELKIHHLSVNAL 1501
            ILW+SD  VPDLGG   E       E     V +     PG Y  + VE ++ ++++  +
Sbjct: 1656 ILWMSDRAVPDLGGHESEYQLHDLLELREPSVEEKEYLLPGLYENICVEFELQNVALCTI 1715

Query: 1502 LKSNQVNEMEGG------GLF-GFDQDMNSGPYNNELCGFDETTSSAPAFRVVKQLIQRC 1554
            L  + ++EMEG        LF  FD++++S   N E  G+++     PAF V++Q + R 
Sbjct: 1716 LSQDILSEMEGSEIPFVTDLFQNFDKELDSSS-NEEAVGYEKIL---PAFSVLRQTLLRL 1771

Query: 1555 LTDAVTSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEFRKLGAT 1614
             ++   S     + +  HL RW+    S +++P+L   +   M KV  +L+   ++LGA 
Sbjct: 1772 FSNVNKS--FITETLQNHLLRWILKETSLMYEPLLVSFVQHQMHKVLVILVNSLKQLGAI 1829

Query: 1615 IIFANFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHS-LLFMDQYN 1673
            +  A + ++II T +     A  YC  L   ++  +LF ++   P+ F H  L+ +D +N
Sbjct: 1830 VPLATYHRMIIATKRSHAMDAMRYCGFLANTIRENQLFHYLRFAPILFVHRCLILVDSFN 1889

Query: 1674 YGGIPARADE--SLDDDSQVDIVSSWNIAEYLPKEIQDHFV 1712
            YG IP   DE   L  ++    + S   A  +  ++ DHF 
Sbjct: 1890 YGSIPV-VDEIHILRGEALKGYIESERPASRMQWDLADHFT 1929


>gi|294878213|ref|XP_002768314.1| DNA polymerase epsilon, catalytic subunit A, putative [Perkinsus
            marinus ATCC 50983]
 gi|239870562|gb|EER01032.1| DNA polymerase epsilon, catalytic subunit A, putative [Perkinsus
            marinus ATCC 50983]
          Length = 1315

 Score = 1108 bits (2865), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 568/1185 (47%), Positives = 784/1185 (66%), Gaps = 43/1185 (3%)

Query: 1    MDRRRWDRQ-DGRRTKKQKLIRSAEEELEAKLGYDLFSEGDKRLGWLLTFASSSL----- 54
            M +  W +  DG   KK++L    +  LE K G ++  E ++R+G+L     S       
Sbjct: 26   MRQTGWSKGVDGAPNKKRRL-GDQDVTLEEKFGIEILQENEERIGYLFNMKESVAPPKVV 84

Query: 55   ---EDEDTRKV--YSCIDLYFVSQDGSTFKSKYKFRPYFYAATKEKME-----MDVEAYL 104
                D D  ++   S + LYF+ +DG+TF++ Y++RPYF      ++      M+V   L
Sbjct: 85   NVDNDADQTELVDVSALLLYFIQKDGTTFRATYRYRPYFLVDINPQISNYEYMMEV---L 141

Query: 105  RRRYESQIADIEILEKEDLDLKNHLSGLHKSY--LKISFDTVQQLMDVKKDLLHVVERNQ 162
             RR+E Q  ++  + + +L   +HL+  +K Y  +K  F   + + D ++ L  +++ N+
Sbjct: 142  GRRFEHQKVNVGTVIRHNLGAVDHLAP-NKMYKLIKCEFPNTELMNDARRTLERILKANR 200

Query: 163  AK---FDAAEAYESILTGKREQRPQDFLDCIVDLREYDVPYHIRFAIDNDVRCGQWYDVS 219
             +    D  +  +    G       D +D I+ L EYD+ + +R +ID+++RCG+WY V 
Sbjct: 201  LRVSHLDHLDDNDPFKEGDGIGSGADPMDSIIGLFEYDLIHTVRTSIDSNIRCGKWYKVV 260

Query: 220  ISSTGPL-LEKRVDLLQRAEVHVCAFDIETTKLPLKFPDADYDIIMMISYMLDGQGYLII 278
             S  G + L  + DLL +  + + A+DIET+K PLKFPDA  D IMMIS M+DG GYLI+
Sbjct: 261  NSMQGMVALTVQEDLLMKPPLRILAWDIETSKAPLKFPDAQQDEIMMISVMVDGDGYLIV 320

Query: 279  NRECVGEDIEDLEYTPKPEFEGYFKVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFD 338
            NRE V   IED EY+P+PEFEG+F+  N +NE ELL  +F  +   +P I VT+NGD+FD
Sbjct: 321  NREEVHGYIEDFEYSPRPEFEGFFECINCDNEKELLVAFFDLLLRTRPHITVTFNGDFFD 380

Query: 339  WPFLETRAAHHGFKMSEELG--FQCDKNQGECRAKFACHLDCFAWVKRDSYLPQGSQGLK 396
             P++  RA  H   +  ++G  +     Q E   +F  H+DC+ WVKRDSYLPQGSQGLK
Sbjct: 381  LPYVHDRAQIHSLNLHHQVGLIYIPTPTQIEIACRFMVHMDCYCWVKRDSYLPQGSQGLK 440

Query: 397  AVTKAKLGYDPLEVNPEDMVRFAKEKPQMMASYSVSDAVATYYLYMTYVHPFIFSLATII 456
            AVT+AKL YDP+E++PE MV +A+E+PQ +ASYSVSDA+ATY+LY  Y+H F+F+LA+II
Sbjct: 441  AVTRAKLKYDPVELDPELMVPYAREQPQELASYSVSDALATYHLYCKYIHDFVFALASII 500

Query: 457  PMSPDEVLRKGSGTLCEMLLMVQAYKANVICPNKHQSDPEKFYRNHLLESETYIGGHVEC 516
            PM+PD+VLR+GSGTLCE LLM QA +A V+ PNKHQ     ++   L+E+ TY GG VEC
Sbjct: 501  PMNPDDVLRRGSGTLCEALLMAQATEAGVLYPNKHQQPGLAYHDGRLIENSTYEGGRVEC 560

Query: 517  LESGVFRSDLPTSFKLDPSAYEQLLNNLDRDLQYAIKVEGKMDLESVSNYDEVKNAIMEK 576
            L +G+FRSD+   F+LD +A ++L+ + D+  ++ ++ E K  ++ + N++EV   + E 
Sbjct: 561  LRTGIFRSDIEEKFRLDTNAIDELIESADKTCRFFVETEEKTTVDEIDNFEEVVTELTEA 620

Query: 577  LLRLQEEPIREECPLIYHLDVAAMYPNIILTNRLQPPSIVTDEVCTACDFNRP--GKTCL 634
            L  L+  P R E PLIYHLDVAAMYPNIIL+NRLQP +IVT + C  C ++ P     C 
Sbjct: 621  LKELRRNPNRSEEPLIYHLDVAAMYPNIILSNRLQPSAIVTPDYCNQCSYSDPQLKSDCK 680

Query: 635  RKLEWVWRGEIFMGKRSDYYHLKKQIESEFVDGTNGHLSKSFLDLPKMEQQSRLKDRLKK 694
            R LEW WRG+++M  R+D  H + ++          H    + +L + E+   L   ++ 
Sbjct: 681  RHLEWKWRGDLYMATRADVQHQQSELSGP------RHKKVGWDELTERERMEILIKNVRN 734

Query: 695  YCQKAYKRVLDKPVTELREAGICMRENSFYVDTVRSFRDRRYEYKGLNKVWKGKLSEAKA 754
            +  KAYKRV    V E++   +C REN FY+DTVR+FRDRRY YKGL K W  KL EA+A
Sbjct: 735  FSLKAYKRV-KSSVFEVKTDTVCQRENPFYIDTVRAFRDRRYTYKGLVKTWGKKLGEAEA 793

Query: 755  SGNSIKIQEAQDMVVLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQ 814
            S +++K+ EA+DM++L+DSLQLAHKCILNSFYGYVMRKGARW+SM MAG+VTYTG+ +I+
Sbjct: 794  SKDALKMSEAKDMILLFDSLQLAHKCILNSFYGYVMRKGARWHSMTMAGIVTYTGSGLIR 853

Query: 815  NARLLIEKIGKPLELDTDGIWCVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNN 874
             AR  ++++G PLELDTDGIWC+LP SFPENF FK K   + LT+ YPC +LNV V    
Sbjct: 854  EARAFVDRLGLPLELDTDGIWCMLPKSFPENFQFKLKS-GRVLTMPYPCSVLNVRVHEKY 912

Query: 875  TNDQYQTLVDPVSKTYETHSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTL 934
            TN QYQ L      TY   S+ SI FE+DGPYK M+LPAS EE  L+KKRYAVFN+DG+L
Sbjct: 913  TNHQYQDLQP--DGTYAKSSQNSIFFEIDGPYKCMLLPASTEEDRLLKKRYAVFNEDGSL 970

Query: 935  AELKGFEIKRRGELKLIKVFQAELFDKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIA 994
            AELKGFEIKRRGELKLI+VFQ ELF K L G +IEE Y+AV  VANRWL++LD +G  + 
Sbjct: 971  AELKGFEIKRRGELKLIQVFQEELFPKCLEGGSIEEAYAAVGQVANRWLEVLDTKGSSLT 1030

Query: 995  DSELIDYISESSTMSKSLADYGEQKSCAVTTARRLSDFLGDTMVKDKGLRCQYIVACEPQ 1054
            D E+I  ISE  TMSKS+ D G  KS ++TTA R+++FLG +++++KG+ C  I+A +P 
Sbjct: 1031 DEEVIHLISEKKTMSKSVEDSGALKSTSITTATRMAEFLGPSILREKGISCHLIIARKPL 1090

Query: 1055 GTPVSERAVPVAIFETDAEIMKFYLRKWCKTSS--DVGIRSIVDWSYYKQRLSSAIQKII 1112
            G   +ERA+PV IF  +  +   YLRKW    S  +  IR I+DW YY+ RL +AIQKII
Sbjct: 1091 GATPTERAIPVNIFSAEEHVKTKYLRKWMGDPSIRNFDIRDIIDWQYYRTRLGAAIQKII 1150

Query: 1113 TIPAAMQKVSNPVPRVVHPDWLYKKVREKEDKFRQRKLVDIFSSL 1157
             IPA  Q V NP P V  P W  K+VRE+ED F+Q+KL D+F+ +
Sbjct: 1151 GIPAMNQHVKNPCPSVELPQWAKKRVREREDTFKQKKLTDMFARM 1195


>gi|449018611|dbj|BAM82013.1| DNA polymerase epsilon, catalytic subunit [Cyanidioschyzon merolae
            strain 10D]
          Length = 2223

 Score = 1104 bits (2856), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 568/1137 (49%), Positives = 760/1137 (66%), Gaps = 35/1137 (3%)

Query: 41   KRLGWLLTFASSSLEDEDTRKVYSCIDLYFVSQD--GSTFKSKYKFRPYFYAATKEKMEM 98
            +R+GWLL  A +++ D  + +  S +D YF+S D  G  F+    +RPYFY       E 
Sbjct: 68   ERIGWLLNVAVAAVHDPASGRQVSALDCYFLSGDEGGGDFRVTLCYRPYFYVGCTPGKET 127

Query: 99   DVEAYLRRRYESQIADIEILEKEDLDLKNHLSG-LHKSYLKISFDTVQQLMDVKKDLLHV 157
            DVE+ L+R +   ++ I   E EDLD+ NHL+    + +L++   T   L+ ++  LL  
Sbjct: 128  DVESALKRDFSDVLSGIHRAELEDLDMLNHLATRARRLFLRVETFTTDDLVRIRSHLLSY 187

Query: 158  VERNQ------AKFDAAEAYESILTGKREQRPQDFLDCIVDLREYDVPYHIRFAIDNDVR 211
                Q             +       +R +R  D  + IV+LREYDVPY  R  ID D+R
Sbjct: 188  ANGKQNPSLIPGDLSTDASASLSSAAQRIRR-TDPYENIVELREYDVPYVTRVCIDCDIR 246

Query: 212  CGQWYDV--SISSTG--PLLEKRVDLLQRAEVHVCAFDIETTKLPLKFPD--ADYDIIMM 265
            CG WY V  S+SS G  P L    +L++RA   V A+DIE TK PLKFPD  AD D IMM
Sbjct: 247  CGYWYRVEHSLSSGGAAPKLHLLSELVERANPTVLAYDIECTKAPLKFPDPYAD-DEIMM 305

Query: 266  ISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNVNNEIELLRLWFAHMQEVK 325
            IS+MLDG+GYL +NR+ + EDI    Y PKPEFE  F V N  +E  LLR +FA  +  +
Sbjct: 306  ISWMLDGRGYLGVNRQIIAEDIHGFTYAPKPEFESSFVVFNEPDEASLLRRFFAEARAAQ 365

Query: 326  PGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDKNQGECRAKFACHLDCFAWVKRD 385
            P +YVTYNGD FDW F+  RA+  G  + +++G      +G CR + A H+DC  WV RD
Sbjct: 366  PRVYVTYNGDAFDWFFVHVRASRLGINILDKIGMSFSAARGLCRGRAAVHMDCIHWVNRD 425

Query: 386  SYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQMMASYSVSDAVATYYLYMTYV 445
            SYLPQGS+GLKAVT+A LGY+P E++PE+M+  A+ +PQ +A+YSVSDAVATY LYM YV
Sbjct: 426  SYLPQGSRGLKAVTRALLGYEPHELDPEEMLTAARTRPQELAAYSVSDAVATYQLYMKYV 485

Query: 446  HPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVICPNKHQSDP-EKFYRNHLL 504
             PFIFSL  I+P  PD+VLRKGSGTLCE LLM +A++ N++ PNK +++  E+ +++ LL
Sbjct: 486  QPFIFSLCNILPFGPDDVLRKGSGTLCESLLMCEAHRRNIVAPNKFKNNATERTFQSRLL 545

Query: 505  ESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQLLNNLDRDLQYAIKVEGKMDLESVS 564
             +ETYIGGHVE L+SG++R+DLP  F++D +A  +L  NLD+ LQ+AI+ E  + LE ++
Sbjct: 546  ANETYIGGHVEALQSGIYRADLPIPFRIDTAAVRELQENLDQFLQFAIEREQDLHLEEIT 605

Query: 565  NYDEVKNAIMEKLLRLQEEPIREECPLIYHLDVAAMYPNIILTNRLQPPSIVTDEVCTAC 624
            +Y+ V+  + E+L RL E+P+ +E PLI HLDV AMYPNIILTNRLQP + VT E C AC
Sbjct: 606  DYENVRADLAERLKRLAEQPLLQERPLILHLDVGAMYPNIILTNRLQPHACVTRETCAAC 665

Query: 625  DFNRPGKTCLRKLEWVWRGEIFMGKRSDYYHLKKQIESEFVDGTNGHLSKSFLDLPKMEQ 684
            DFN     C RK+ WVWRGE +     +   ++  + +  V        K   D    + 
Sbjct: 666  DFNGTSD-CRRKMHWVWRGECYPATIGEVQSIRASVLTT-VRARRRQGEKVSDD----DA 719

Query: 685  QSRLKDRLKKYCQKAYKRVLDKPVTELREAGICMRENSFYVDTVRSFRDRRYEYKGLNKV 744
            ++  + RL++YC K +KRVL+ P  + REA IC REN FYVDTVR+FRDRRYEYK L K 
Sbjct: 720  EAMYRKRLREYCMKVHKRVLE-PTVQTREAWICQRENPFYVDTVRAFRDRRYEYKRLLKQ 778

Query: 745  WKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGV 804
            W+  L+E  + G SI   EA++M ++YDS+QLAHKCILNSFYGYVMR+ ARWYSMEMAGV
Sbjct: 779  WRKALAE--SGGASI---EARNMCIVYDSMQLAHKCILNSFYGYVMRRAARWYSMEMAGV 833

Query: 805  VTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLPGSFPENFTFKTKDLKKKLTISYPCV 864
            VT TGA II+ AR  IE++G PLELDTDGIWC +P +FP + T  T+   ++++IS  C 
Sbjct: 834  VTQTGASIIRLAREWIERVGLPLELDTDGIWCAIPATFPNDITLHTRS-GREISISLLCT 892

Query: 865  MLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEFEVDGPYKAMILPASKEEGILIKKR 924
            +LN  VA   TN QYQ    P   TY+  SE SI FE+DGPY+AM+LPAS+EEG  IKKR
Sbjct: 893  VLNTKVAAQYTNHQYQEW-SPDEGTYKQRSEFSIFFEIDGPYRAMVLPASREEGKSIKKR 951

Query: 925  YAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFLHGSTIEECYSAVAAVANRWLD 984
            YAVF  DG+LAE+KGFE+KRRGELKLIKV Q+E+F +FL GST+ ECY+AV   AN WLD
Sbjct: 952  YAVFQRDGSLAEIKGFELKRRGELKLIKVLQSEIFGRFLEGSTLAECYAAVGETANLWLD 1011

Query: 985  LLDNQGKDIADSELIDYISESSTMSKSLADY--GEQKSCAVTTARRLSDFLGDTMVKDKG 1042
            +LD+ G  ++D+EL++ ++E + MSK LA Y    QKS A+T A+R+ +FLG  MV+DKG
Sbjct: 1012 VLDSNGGLLSDAELLELVAEQTHMSKPLAAYIQAGQKSSAITCAKRIQEFLGKDMVRDKG 1071

Query: 1043 LRCQYIVACEPQGTPVSERAVPVAIFETDAEIMKFYLRKWCKTSSDVGIRSIVDWSYYKQ 1102
            L C+Y++A  P GT V+ERA+PV IF  D E  +  LRKW +       R I+DW YY+ 
Sbjct: 1072 LACRYVIARYPLGTQVTERAIPVQIFSADLEQRQALLRKWLREPV-YNFREILDWDYYRG 1130

Query: 1103 RLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLYKKVREKEDKFRQRKLVDIFSSLKK 1159
            RL++ +Q+II+IPAA Q V NPVPR+ HPDWL +++R+     +Q  L   F + +K
Sbjct: 1131 RLANTVQRIISIPAACQGVPNPVPRIEHPDWLRRRLRDLACAQKQTTLKSFFRADQK 1187



 Score = 63.9 bits (154), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 48/195 (24%), Positives = 91/195 (46%), Gaps = 29/195 (14%)

Query: 1476 PVLTYPGAYRKVSVELKIHHLSVNALLKSNQVNEMEGGGLFGFDQDMNSGPYNNELCGFD 1535
            P ++ PGAY  + ++L+I  L + A+L+++ +  M          D +  P  + L    
Sbjct: 1750 PQVSVPGAYSGICIDLEIQDLPLVAILEADTLYAM----------DRSQAPSGSLL---- 1795

Query: 1536 ETTSSAPAFRVVKQLIQRCLTDAVTSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHK 1595
                     +V++ L+Q        +G+  A  +  HL+RW+    +     +L   L  
Sbjct: 1796 --------VQVLRPLVQ-TWVGLEANGDQSAALLTSHLHRWIVRGLAGRTSRMLCAELLH 1846

Query: 1596 VMQKVFAMLLAEFRKLGATIIFANFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWI 1655
            +++K F  L+    ++ A++I A   ++++ T +  LS AKAYC  LL++ +TR +   +
Sbjct: 1847 LIRKTFHHLMETLAEMNASVIHATPFRLMLCTHRRQLSEAKAYCRFLLESCRTRPVLRRL 1906

Query: 1656 ELEPV------HFWH 1664
               PV       FWH
Sbjct: 1907 IFAPVLRYIRAAFWH 1921


>gi|390356725|ref|XP_793813.3| PREDICTED: DNA polymerase epsilon catalytic subunit A-like
            [Strongylocentrotus purpuratus]
          Length = 2578

 Score = 1084 bits (2803), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 555/1085 (51%), Positives = 744/1085 (68%), Gaps = 43/1085 (3%)

Query: 345  RAAHHGFKMSEELGFQCDKNQGECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLG 404
            R  + G  M  E+GFQ D   GE + +   H+D + WVKRDSYLP GSQ LKA ++AKL 
Sbjct: 669  RGDYSGLDMYREIGFQKDA-AGEYKCRSVIHMDAYRWVKRDSYLPVGSQNLKAASRAKLR 727

Query: 405  YDPLEVNPEDMVRFAKEKPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVL 464
            YDP+E++PEDM R A E+PQ +A+YSVSDAVATYYLYM YVHPFIF+L TIIPM PDEVL
Sbjct: 728  YDPIEMDPEDMCRMASEQPQTLANYSVSDAVATYYLYMKYVHPFIFALCTIIPMEPDEVL 787

Query: 465  RKGSGTLCEMLLMVQAYKANVICPNKHQSDPEKFYRN-HLLESETYIGGHVECLESGVFR 523
            RKGSGTLCE LLMVQAY AN+I PNK +    K  R+ HLLE+ETY+GGHVE LESGVFR
Sbjct: 788  RKGSGTLCEALLMVQAYHANIIFPNKQEQVFNKLTRDGHLLETETYVGGHVEALESGVFR 847

Query: 524  SDLPTSFKLDPSAYEQLLNNLDRDLQYAIKVEGKMDLESVSNYDEVKNAIMEKLLRLQEE 583
            SDLP  F++ P A++QL+ +++R +++AI+ E K+ L +V+N++E+   I EKL  L++ 
Sbjct: 848  SDLPCRFRMVPEAFQQLMEDVERTMKHAIEEEEKIPLSTVTNFEEICEEIREKLAALRDN 907

Query: 584  PIREECPLIYHLDVAAMYPNIILTNRLQPPSIVTDEVCTACDFNRPGKTCLRKLEWVWRG 643
            P R E P+IYHLDV AMYPNIILTNRLQP ++V + VC ACDFN+PG  C R++ W+WRG
Sbjct: 908  PARLENPVIYHLDVGAMYPNIILTNRLQPSAMVDEAVCAACDFNKPGARCQREMSWMWRG 967

Query: 644  EIFMGKRSDYYHLKKQIESEFVDGTN-GHLSKSFLDLPKMEQQSRLKDRLKKYCQKAYKR 702
            +     R +Y+ +++Q+E E +   N G   + F +L K EQ    K RL++YC+KAYK+
Sbjct: 968  DYMPASRGEYHRIQQQLEIERIPPANPGEPHRVFHELGKEEQALLEKKRLQEYCRKAYKK 1027

Query: 703  VLDKPVTELREAGICMRENSFYVDTVRSFRDRRYEYKGLNKVWKGKLSEAKASGNSIKIQ 762
                   E +   IC RENSFYVDTVR+FRDRRYE+KGL KVWK K++ A   G++ +I+
Sbjct: 1028 T-KITKQEEKHTTICQRENSFYVDTVRAFRDRRYEFKGLLKVWKRKVAGAMEKGDAAEIK 1086

Query: 763  EAQDMVVLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEK 822
             A++  +LYDSLQLAHKCILNSFYGYVMRKG+RWYSMEMAG+V YTGA II  AR LIE+
Sbjct: 1087 SARNKEILYDSLQLAHKCILNSFYGYVMRKGSRWYSMEMAGIVCYTGAGIITRARELIEQ 1146

Query: 823  IGKPLELDTDGIWCVLPGSFPENFTFKTKDLKK-KLTISYPCVMLNVDVARNNTNDQYQT 881
            IG+PLELDTDGIWCV+P SFPENF  KT + KK K+ ISYP  MLN+ V   NTNDQYQ 
Sbjct: 1147 IGRPLELDTDGIWCVMPASFPENFDIKTTNPKKPKVAISYPGAMLNIMVWDYNTNDQYQE 1206

Query: 882  LVDPVSKTYETHSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFE 941
            LVDP + TYE   E SI FEVDGPY AMILPASKEEG  +KKRYAVFN DG+LAELKGFE
Sbjct: 1207 LVDPSNLTYEVRKENSIFFEVDGPYLAMILPASKEEGKKLKKRYAVFNFDGSLAELKGFE 1266

Query: 942  IKRRGELKLIKVFQAELFDKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDY 1001
            +KR GEL+LIK+FQA +F+ FL G+T+EECY+AVA +A+ WLD+L ++  D+ D EL   
Sbjct: 1267 VKRNGELQLIKIFQASVFEAFLKGTTLEECYAAVAKIADYWLDVLYSKAVDMPDCELFHL 1326

Query: 1002 ISESSTMSKSLADYGEQKSCAVTTARRLSDFLGDTMVKDKGLRCQYIVACEPQGTPVSER 1061
            ISE+ +MS+ L DYGEQKS +++TA+RL++FLGD MVKDKGL C++++A +P G PV+ER
Sbjct: 1327 ISENRSMSRKLEDYGEQKSTSISTAKRLAEFLGDQMVKDKGLACKFVIAKKPDGAPVTER 1386

Query: 1062 AVPVAIFETDAEIMKFYLRKWCK--TSSDVGIRSIVDWSYYKQRLSSAIQKIITIPAAMQ 1119
            A+P+AIF+ +  I K YL+KW K  T +D  IR+I+DW+YY +RL S I KIITIPAA+Q
Sbjct: 1387 AIPMAIFQAEPSIKKHYLKKWLKFQTMTDFDIRTILDWNYYIERLGSTISKIITIPAALQ 1446

Query: 1120 KVSNPVPRVVHPDWLYKKVREKEDKFRQRKLVDIFSSLKKDDFLNKTCNAETNLMDEN-- 1177
            +VSNPVPRV HP+WL+KK+ EK D F+Q+K+ ++F  ++K   + +      ++  E+  
Sbjct: 1447 QVSNPVPRVAHPEWLHKKLCEKNDVFKQQKISEMF--VRKPKTVEQEPEPSLDMEPESQP 1504

Query: 1178 -VEDLEDFPKKRRNSVNGPRPIVRCFEVNNEQKTVKTTDQVDSLRQQLEPSEVSDQQ--- 1233
             + D+EDF           +  V          T +  D   S   ++E S    +    
Sbjct: 1505 EIVDMEDFGGPSGGKKKPSKVAV---------ATKRKRDDAGSRAARVESSAALTESWED 1555

Query: 1234 ---PSSQNAIDTENIDRIVDYKGWLELKKRKWKDNLDRRKKQKLGSLRASHQANGVSESL 1290
               P+       + I      K W++ +K+KW     +RK++K   L      +G+   +
Sbjct: 1556 VLGPAPGMGRKRKTI------KKWVQYQKQKWALQARQRKERKRRRLD-----DGMDAGV 1604

Query: 1291 GDMINHKEAQRRTGVGSYFRRQETAMTRCHWQIIQLVPSSQSGVFLAWVVVEGIMVRIPI 1350
            G ++    A   TG+GS+FRR    M    WQIIQ++ +   G+F  W ++   +  I +
Sbjct: 1605 GGVV---RAGASTGLGSFFRRTAKTMLDSPWQIIQIMETGHPGLFKLWALIGSDLHNIKL 1661

Query: 1351 TVPRLFYLNSKDPI--VEKFPGRRVNKTLPHGRRSFNLIEVMIDEDQFRKESKKLAALLA 1408
             VPR+FY+N + P   +E    ++V +TLP      NL +  + E+ +++ + +L A LA
Sbjct: 1662 MVPRVFYVNQRTPKENIEGAMWKKVTRTLPRSNPVLNLYQYTVPEELYQQHANELTADLA 1721

Query: 1409 DPEVE 1413
             P++E
Sbjct: 1722 APDIE 1726



 Score =  718 bits (1854), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 354/661 (53%), Positives = 465/661 (70%), Gaps = 23/661 (3%)

Query: 5   RWDRQDGRRTKKQ------KLIRSA-EEELEAKLGYDLFSEGDKRLGWLLTFASSSLEDE 57
           R D  DG   KK       +L RS   +EL+   G+D + E  +R+GWL+    + + DE
Sbjct: 13  RSDNADGGWAKKSEDSSEARLQRSVINDELDLLYGFDRYKEPAERVGWLINMHPADILDE 72

Query: 58  DTRKVYSCIDLYFVSQDGSTFKSKYKFRPYFYAATKEKMEMDVEAYLRRRYESQIADIEI 117
            ++K+ S +D YF+  DGS FK    FRPYFY  TK++ E +V AYL R++   +A +E 
Sbjct: 73  -SKKLISAVDYYFLQDDGSRFKVSLPFRPYFYIVTKKECEREVSAYLTRKHFGTLASVET 131

Query: 118 LEKEDLDLKNHLSGLHKSYLKISFDTVQQLMDVKKDLLHVVERNQAKFDAAEAYESILT- 176
           + KEDLDL NHL GL  S LK+SF + Q LM V+++++  V +N+ +  ++ AY ++LT 
Sbjct: 132 VYKEDLDLPNHLVGLKCSCLKLSFHSTQDLMKVRREIMPRVRKNREREKSSSAYTALLTS 191

Query: 177 --------GKRE---QRPQDFLDCIVDLREYDVPYHIRFAIDNDVRCGQWYDV-SISSTG 224
                   G R    ++  D +D I+D+REYDVPYH+R AID  +  G WY V    S  
Sbjct: 192 HLGGDDNPGGRAAGGKKINDQMDNIIDIREYDVPYHVRVAIDKKIHVGHWYSVQGRGSMA 251

Query: 225 PLLEKRVDLLQRAEVHVCAFDIETTKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVG 284
           P++ +R DLL+R +  V AFDIETTKLPLKFPDA+ D +MMISYM+DGQGYLI NRE + 
Sbjct: 252 PIITQRDDLLERPDPVVLAFDIETTKLPLKFPDAETDSVMMISYMIDGQGYLITNREIIA 311

Query: 285 EDIEDLEYTPKPEFEGYFKVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLET 344
           ED+ED EYTPKPE+EG F V N + E+  L+ +  H+ EVKP I VTYNGD FDWPF+ET
Sbjct: 312 EDVEDFEYTPKPEYEGPFIVYNEDTEMTCLQKFIDHVLEVKPNIIVTYNGDMFDWPFIET 371

Query: 345 RAAHHGFKMSEELGFQCDKNQGECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLG 404
           R  H+G  M  E+GFQ D   GE + +   H+D + WVKRDSYLP GSQ LKA ++AKL 
Sbjct: 372 RYKHYGIDMYREIGFQKDA-AGEYKCRSVIHMDAYRWVKRDSYLPVGSQNLKAASRAKLR 430

Query: 405 YDPLEVNPEDMVRFAKEKPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVL 464
           YDP+E++PEDM R A E+PQ +A+YSVSDAVATYYLYM YVHPFIF+L TIIPM PDEVL
Sbjct: 431 YDPIEMDPEDMCRMASEQPQTLANYSVSDAVATYYLYMKYVHPFIFALCTIIPMEPDEVL 490

Query: 465 RKGSGTLCEMLLMVQAYKANVICPNKHQSDPEKFYRN-HLLESETYIGGHVECLESGVFR 523
           RKGSGTLCE LLMVQAY AN+I PNK +    K  ++ HLLE+ETY+GGHVE LESGVFR
Sbjct: 491 RKGSGTLCEALLMVQAYHANIIFPNKQEQVFNKLTKDGHLLETETYVGGHVEALESGVFR 550

Query: 524 SDLPTSFKLDPSAYEQLLNNLDRDLQYAIKVEGKMDLESVSNYDEVKNAIMEKLLRLQEE 583
           SDLP  F++ P A++QL+ +++R +++AI+ E K+ L +V+N++E+   I EKL  L++ 
Sbjct: 551 SDLPCRFRMVPEAFQQLMEDVERTMKHAIEEEEKIPLSTVTNFEEICEEIREKLAALRDN 610

Query: 584 PIREECPLIYHLDVAAMYPNIILTNRLQPPSIVTDEVCTACDFNRPGKTCLRKLEWVWRG 643
           P R E P+IYHLDV AMYPNIILTNRLQP ++V + VC ACDFN+PG  C R++ W+WRG
Sbjct: 611 PARLENPVIYHLDVGAMYPNIILTNRLQPSAMVDEAVCAACDFNKPGARCQREMSWMWRG 670

Query: 644 E 644
           +
Sbjct: 671 D 671



 Score =  335 bits (859), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 201/603 (33%), Positives = 317/603 (52%), Gaps = 72/603 (11%)

Query: 1442 LARYAHILWISDDGVPDLGGTSEEDECFA---DEVHQPVLTYPGAYRKVSVELKIHHLSV 1498
            L ++ H++W S    PDLGG   +D       DE     L + G Y+ V V+L + +L+V
Sbjct: 1981 LNKHGHVMWASPTNRPDLGGKEADDNRLVTEFDESGGVELNHSGCYQTVCVDLDMANLAV 2040

Query: 1499 NALLKSNQVNEMEGG-GLFGFD-------QDMNSGPYNN--ELCGFDETTSSAPAFRVVK 1548
            N LL+S+QV+E+EG  G   FD       +DM SG       L  +DET     AFR++K
Sbjct: 2041 NTLLQSHQVSELEGAAGSIAFDAIQQTSLEDMVSGQPGAAASLASYDETALCTVAFRIMK 2100

Query: 1549 QLIQRCLTDAVTSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEF 1608
             ++   L D  T  NVFAD  + H YRWLCSP + L+DP L R L+ +M+K+F  L++EF
Sbjct: 2101 TMVHGWLRDVTTYHNVFADYQIMHYYRWLCSPSALLYDPALRRTLNGLMKKLFLQLMSEF 2160

Query: 1609 RKLGATIIFANFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLF 1668
            ++LGA I+ AN+++++I T K  +  A  Y D +   +++ +LF  +EL     W  +++
Sbjct: 2161 KRLGAVIVHANYNQIVICTKKTRIVDAVTYVDYVTNTIKSNDLFHGVELSYKQCWQLIMW 2220

Query: 1669 MDQYNYGGIPARADESL----------DD----------DSQVDIVSSWNIAEYLP--KE 1706
            +D  N+GG+  +  E+L          DD          D++ ++  +WN+  YLP  + 
Sbjct: 2221 LDTANHGGVKGKIPEALEGENSENTEEDDVVMATPPNQKDTEEEVEMNWNLMHYLPTAEN 2280

Query: 1707 IQDHFVLVVSEFMYIPWKHAQKLAASRASLQEGSSCTPSITVAAAENFESH--------- 1757
             Q  F ++++ ++    KH Q         +E    TP  T     N +S          
Sbjct: 2281 CQTTFNMIIAGYILAIHKHIQ---------EEQDRVTPGNTPIRRRNNQSQTQKTQGDLT 2331

Query: 1758 ----IVQYVKGEISSYFTGKLLSIVRDAIHHMKKMNNDQHN----SPGVMQTAANIHKVD 1809
                +V Y +G +    + +L +I +D     K+++  + +    S    +   +   ++
Sbjct: 2332 TTPSLVGYSQGLVDEELSQRLFAITQDI---QKRLSGSRQSRLEPSSEFPRLPGSYLPLN 2388

Query: 1810 AP-LEFIKHVCAAFALDQNVQHDVLVMRKNLLKYVRVREFAPEAEFRDPCPSFILPNVIC 1868
             P LEF+K +    +LD N+   V  M++NLL+ + V EF+ +A++RDPC S+ILP VIC
Sbjct: 2389 NPSLEFVKAITKVLSLDSNIVSQVSRMKRNLLRLISVGEFSDDADWRDPCLSYILPEVIC 2448

Query: 1869 SYCNDCRDLDLCRDMALLAQD----WHCAMPQCGQPYDREVMENALLQIVRQRERLYHLQ 1924
             +CN CRDLDLCRD  +L QD    W C   QC   YD   +E +L++ +++    Y LQ
Sbjct: 2449 RFCNHCRDLDLCRD-PMLIQDGQVLWQCI--QCQSEYDVSAIEESLVEALQKASMAYTLQ 2505

Query: 1925 DLVCIRCNQVKAAHLAEQCACAGSFRCKEDASDFRSKMQIFLNIANRQGFQLLQECTSWI 1984
            DL C +C+QVK +++A  C CAG F        F +KM+ F NIA     +LLQE  + I
Sbjct: 2506 DLSCTKCHQVKLSNMANYCECAGQFATVITHEAFLNKMKTFSNIARHYDMKLLQETVTMI 2565

Query: 1985 LEV 1987
            L +
Sbjct: 2566 LRM 2568


>gi|50554027|ref|XP_504422.1| YALI0E26367p [Yarrowia lipolytica]
 gi|74633323|sp|Q6C4J0.1|DPOE_YARLI RecName: Full=DNA polymerase epsilon catalytic subunit A; AltName:
            Full=DNA polymerase II subunit A
 gi|49650291|emb|CAG80023.1| YALI0E26367p [Yarrowia lipolytica CLIB122]
          Length = 2183

 Score = 1075 bits (2781), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 585/1451 (40%), Positives = 851/1451 (58%), Gaps = 96/1451 (6%)

Query: 1    MDRRRWDRQDGRRTKKQKLIRSAEEELEAKLGYDLFSEGDKRLGWLLTFASSSLEDEDTR 60
             +RRR +R +    K   + R   + ++ ++G+  FS  +KR+GWL+    + L+ E   
Sbjct: 20   FERRRLERIEQLGQKFAAVER--RDAIDDRMGFTRFSGDEKRVGWLVNMHETLLQSETAE 77

Query: 61   KVYSCIDLYFVSQDGSTFKSKYKFRPYFYAATKEKMEMDVEAYLRRRYESQIADIEILEK 120
            +  + +D YF  ++G  FKS   FRPYF+   K   E  V+  + + +E  +A  EI+ K
Sbjct: 78   RGLAAVDYYFYDEEGGNFKSTVVFRPYFFVICKPHTEHAVKDLMEKMFERVLASTEIVTK 137

Query: 121  EDLDLKNHLSGLHKSYLKISFDTVQQLMDVKKDLLHVVER-NQAKFDAAEAYESILTGKR 179
            EDL+L NHL+G  +  +K+ F   + L   +  L  +V+R  Q        YE  L G  
Sbjct: 138  EDLNLTNHLTGKKRKAVKLEFHNSEDLSSTRFTLSKIVDRQTQQTEQHLNIYE--LEGDV 195

Query: 180  EQRPQDFLDCIVDLREYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLLEKRVDLLQRAEV 239
            +    D    I  ++E+DVP+  R AID D+R G WY+V+  +   +L+  V+   RA+ 
Sbjct: 196  DTS-TDVESSITGIKEFDVPFETRVAIDLDIRVGNWYEVTKENDTAVLKHMVEREYRADP 254

Query: 240  HVCAFDIETTKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFE 299
             V A+DIET K PL+FPD+  D IMMISYM+DG+G+LI NRE V EDIED EYTPKPEF 
Sbjct: 255  VVMAYDIETEKAPLRFPDSAVDRIMMISYMIDGEGFLITNREMVSEDIEDFEYTPKPEFP 314

Query: 300  GYFKVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGF 359
            G F + N  NE  +L  WF H+++V P +  +YNGD+FD+PF++ R A HG  + +E+G+
Sbjct: 315  GNFTIFNEPNEKAVLEKWFEHIRDVCPTVMTSYNGDFFDFPFIDKRTAFHGMNLYDEIGW 374

Query: 360  Q-CDKNQGECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRF 418
            +  ++ + EC   +  H+DC  WVKRDSYLPQGSQGLKAVTK KL YDP E++PE M  +
Sbjct: 375  KKVEEERYEC--SYCVHMDCLNWVKRDSYLPQGSQGLKAVTKVKLSYDPKELDPEKMTPY 432

Query: 419  AKEKPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMV 478
            A++ PQ++A YSVSDAVATYYLYM YVHPFIFSL  IIP++PD VLRKG+GTLCEMLLMV
Sbjct: 433  ARDHPQILAEYSVSDAVATYYLYMKYVHPFIFSLCCIIPLNPDAVLRKGTGTLCEMLLMV 492

Query: 479  QAYKANVICPNKHQSDPEKFYRNHLLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYE 538
            +AY+  +I P+KH+   E+ Y+ HL+++ETY GGHVE L +GVFRSD+   F +D ++ +
Sbjct: 493  KAYEGRIILPDKHKPALERHYKGHLVDNETYTGGHVESLAAGVFRSDIMVDFDIDTNSID 552

Query: 539  QLLNNLDRDLQYAIKVEGKMDLESVSNYDEVKNAIMEKLLRLQEEPIREECPLIYHLDVA 598
            +LL NLD  L++ + VE         N DEV++ I+E+L  L+  P R + PLIYH+DVA
Sbjct: 553  ELLVNLDETLEFCVTVEAGKKSSDFENLDEVRDQIIEQLQELKSNPKRSDYPLIYHVDVA 612

Query: 599  AMYPNIILTNRLQPPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYYHLKK 658
            +MYPNI+ TNRLQP S+V ++ C  CD+NRP KTC R+LEW  R + +   + D  +LK+
Sbjct: 613  SMYPNIMTTNRLQPDSMVDEKDCAVCDYNRPDKTCARELEWARRVDYYPVSKGDVNNLKQ 672

Query: 659  QIESEFVDGTNGHLS-------------------KSFLDLPKMEQQSRLKDRLKKYCQKA 699
             +  E+  G  G+ S                   K +  L   EQ ++LK+R+  +  K 
Sbjct: 673  GLVEEYSGGRFGNGSSVEISYDEGMTEREKFQKRKGWAGLSGQEQANKLKERVAAFSLKT 732

Query: 700  YKRVLDKPVTELREAGICMRENSFYVDTVRSFRDRRYEYKGLNKVWKGKLSEAKASGNSI 759
              R  D   T +++  +C REN FYVD V+ F+ RR +YK   K W     EA ++ +  
Sbjct: 733  KARKTDSETT-VQKTIVCQRENPFYVDVVQEFKQRRIDYKTKAKRWN---KEAASASDPA 788

Query: 760  KIQEAQDMVVLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLL 819
              +EA+ M +  DS+QLAHK ILNSFYGYVMRKG+RWYSMEMAGV  YTGAKII+ AR  
Sbjct: 789  SREEAKKMAITNDSMQLAHKVILNSFYGYVMRKGSRWYSMEMAGVTCYTGAKIIKIARQT 848

Query: 820  IEKIGKPLELDTDGIWCVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQY 879
            +E +G PLELDTDGIWC+LP +FPE F  K KD      + YPC ++N  V R+ TN QY
Sbjct: 849  MEGLGIPLELDTDGIWCMLPKTFPEKFKCKFKD-GSSYELEYPCSIMNYLVHRDFTNHQY 907

Query: 880  QTLVDPVSKTYETHSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKG 939
            Q L +P +  Y+THSE SI FE+DGPYK M++P S ++G  +KKRY VF+D   + ELKG
Sbjct: 908  QKL-NPETGKYDTHSENSIFFELDGPYKCMMMPTSTDKGKGLKKRYVVFDDRNKIVELKG 966

Query: 940  FEIKRRGELKLIKVFQAELFDKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELI 999
            FE+KRRGEL LIK FQ++L+D FL GS + ECY+A A VA  WL ++D++GK+++D ELI
Sbjct: 967  FEVKRRGELSLIKKFQSQLWDTFLEGSNLVECYAAQARVAEAWLAVIDSRGKNLSDEELI 1026

Query: 1000 DYISESSTMSKSLADYGEQKSCAVTTARRLSDFLGDTMVKDKGLRCQYIVACEPQGT-PV 1058
            D + E+ +MSK + +YG QKS A+TTARRL++ +GD+++    L  +YI+A   + + PV
Sbjct: 1027 DLVCENKSMSKPVHEYGSQKSTALTTARRLAEIMGDSILTGGKLSTKYIIAVRTKNSMPV 1086

Query: 1059 SE-------------RAVPVAIFETDA--EIMKFYLRKWCKTS-SDVGIRSIVDWSYYKQ 1102
             E             RA+P  +FET++  E ++F L++W          R ++DW YY++
Sbjct: 1087 PEAKKGSDEDSSTADRAIPTLVFETESLDEKLRF-LKRWMGPRWESTDPRDVIDWMYYRE 1145

Query: 1103 RLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLYKKVREKEDKFRQRKLVDIFSSLKKDDF 1162
            RL++ I K++ IPA +  + NPV     P+W    ++++++  +Q  L   F   K    
Sbjct: 1146 RLATTINKLVVIPAILLGLKNPVRGCDPPEWASDIIKQRDNPIKQSTLSSYFVKGKLPT- 1204

Query: 1163 LNKTCNAETNLMDENVEDLEDFPKKRRNSVNGPRPIVRCFEVNNEQKTVKTTDQVDSLRQ 1222
                 + E  +M+  V D+E        S   P    R       +KTV+ TD+      
Sbjct: 1205 PEPILSEEDEVMEIQVGDIESIGTTPSPS-RPPGVPARVVVSKRVRKTVEETDK------ 1257

Query: 1223 QLEPSEVSDQQPSSQNAIDTENIDRIVDYKGWLELKKRKWKDNLDRRKKQKLGSLRASHQ 1282
                         S  ++  +  D   DY  +++  K KWK    +R ++          
Sbjct: 1258 -------------STPSLPHKAPDPFADYAAYIKYAKVKWKHQKAQRDRRA--------- 1295

Query: 1283 ANGVSESLGDMINHKEAQRRTGVGSYFRRQETAMTRCHWQIIQLVPSSQSGVFLAWVVVE 1342
                         H   +   G+ S +  +   + +  W ++ +  + + G   A V++ 
Sbjct: 1296 -------------HLFGESDNGIASSWVSKNAHLAQDAWHLVSIHAAEKPGQVEASVIIG 1342

Query: 1343 GIMVRIPITVPRLFYLNSKDPIV-EKFPGRRVNKTLPHGRRSFNLIEVMIDEDQFRKESK 1401
              M R+ I VPR  Y+ S++P+  +KF        +    +   L   ++ ED ++ E  
Sbjct: 1343 DKMQRVQINVPRKVYVGSREPLKWDKFTDVTNAMAVAEEEQPKYLYRAVMSEDMYQTEMT 1402

Query: 1402 KLAALLADPEV 1412
               + L DP V
Sbjct: 1403 NPESPLKDPHV 1413



 Score =  186 bits (473), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 150/631 (23%), Positives = 275/631 (43%), Gaps = 83/631 (13%)

Query: 1380 GRRSFNLIEVMIDEDQFRKESKKLAALL---------ADPEVEVLGWQQNAAKIGMQRCA 1430
            G R+  L+  +   D  R   +K+AAL            P    +GWQ++  +  +    
Sbjct: 1569 GSRNGQLVFALHSPD--RNVDEKVAALARIPCIRLRPVPPSTAAVGWQRDLVRRLIASFL 1626

Query: 1431 ASSQWFNERISLARYAH--------------------------ILWISDDGVPDLGGTSE 1464
            +     +  + +ARYA                           +LW S       GG   
Sbjct: 1627 SHGANISYLVEMARYAKMPLCHVQDTRDVIDVSYARRLIQNSVVLWWS--AALSTGG--- 1681

Query: 1465 EDECFADEVHQPVLTYPGAYRKVSVELKIHHLSVNALLKSNQVNEMEGGGLFGFDQDMNS 1524
                  D+   PV   PG Y  +  E+KI HL +NALL+S  + + EG            
Sbjct: 1682 ---ALTDQAEVPVANNPGLYTNICFEIKIEHLVLNALLQSAVIQDTEGD----------- 1727

Query: 1525 GPYNNELCGFDETTSSAPAFRVVKQLIQRCLTDAVTSGNVFADAILQHLYRWLCSPHSKL 1584
               +NEL        +  A + +K +++                +L +   W+ +P S+L
Sbjct: 1728 --IHNELLS---NAFNPHALKTLKMVVKEWWEHG--DKKRPPQDLLDNFTVWVYAPESRL 1780

Query: 1585 HDPVLHRILHKVMQKVFAMLLAEFRKLGATIIFANFSKVIIDTGKFDLSAAKAYCDSLLK 1644
              P L      + +K F  L  E RK  A +++A+  K+++ T K +L    +Y + +++
Sbjct: 1781 FSPQLLYHTQNLTKKTFLYLAQECRKHQAQLVYADQHKLVLQTEKTELQLVYSYSNYIVR 1840

Query: 1645 ALQTRELFEWIELEPVHFWHSLLFMDQYNYGGIPARADESLDDDSQVD-IVSSWNIAEYL 1703
             ++T  + +++ ++   +W + L+MD++NYGG    +D  +D   Q + ++  W+IA +L
Sbjct: 1841 QIRTHPILKYVSVDITRYWDTFLWMDKWNYGGY--SSDVIVDPSKQSESLLMHWHIANFL 1898

Query: 1704 PKEIQDHFVLVVSEFMYIPWKHAQKLAASRAS-LQEGSSCTPSITVAAAENFESHIVQYV 1762
            P+ +Q  F   V E++++     +K   +R + + +  S TP +T    ++      ++ 
Sbjct: 1899 PETLQQEFSKWVQEYIHL--LRLRKYPENRTTDVDDMPSDTPMLTDGDKDDAALLSDKFF 1956

Query: 1763 KGEISSYFTGKLLSIVRDAIHHMKKM--NNDQHNS------PGVMQTAANIHKVDAPLEF 1814
               + SY   KL+  V+     +  +  + D  ++      PG M       + +  +EF
Sbjct: 1957 GKGVVSYLHPKLVRRVKLLAQKLSDVLSSGDSIDAFKFPVLPGSMIQP----ETNPVVEF 2012

Query: 1815 IKHVCAAFALDQNVQHDVLVMRKNLLKYVRVREFAPEAEFRDPCPSFILPNVICSYCNDC 1874
             K+VC  + ++     +V ++ ++LL    + EF+ E  FRDP  S  L N++C  C + 
Sbjct: 2013 AKYVCHIYGINAKANFEVQILLRDLLNIFDINEFSEEGTFRDPSMSLKLTNMMCFKCKNP 2072

Query: 1875 RDLDLCRDMALLAQDWHCAMPQCGQPYDREVMENALLQIVRQRERLYHLQDLVCIRCNQV 1934
             DLDLC+D       + C  P C   YD  ++E  L+  +++    Y  QD  C +C +V
Sbjct: 2073 CDLDLCKDSCCTKSGFRC--PLCNSLYDMVIVEQRLVGQLQRMILEYETQDFRCDKCRRV 2130

Query: 1935 KAAHLAEQCACAGSFRCKEDASDFRSKMQIF 1965
            K   L E C C+GS+     A D   ++ I+
Sbjct: 2131 KEYELTEFCPCSGSWVTIMSAEDVHKELSIY 2161


>gi|118354772|ref|XP_001010647.1| DNA polymerase family B, exonuclease domain containing protein
            [Tetrahymena thermophila]
 gi|89292414|gb|EAR90402.1| DNA polymerase family B, exonuclease domain containing protein
            [Tetrahymena thermophila SB210]
          Length = 2298

 Score = 1073 bits (2775), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 542/1155 (46%), Positives = 765/1155 (66%), Gaps = 44/1155 (3%)

Query: 12   RRTKKQKLIRSAEEELEAKLGYDLFSEGDKRLGWLLTFASSSLEDEDTRKVYSCIDLYFV 71
            ++ +KQ++    +E ++ K G +   +G  RLG++  F ++S+ DED  +  S + +Y+V
Sbjct: 2    QKGEKQRI----QEIVDQKFGIETVKDGPDRLGFIANFKTASIVDEDMNE-RSVLQIYYV 56

Query: 72   SQDGSTFKSKYKFRPYFYAATKEKMEMDVEAYLRRRYESQIADIEILEKEDLDLKNHLSG 131
              +G+  KS   ++PYFY A +  +E ++  +L +++E++I+ +EI+EK DL+  NHLSG
Sbjct: 57   EDNGNWCKSTILYQPYFYVACERNLEKEIAFFLEKKFENKISKVEIVEKIDLEQINHLSG 116

Query: 132  LHKSYLKISFDTVQQLMDVKKDLLHVVERN-QAKFDAAEAYESILTGKREQRPQDF---- 186
              K Y+KISF T+Q L+ V+  L   +++  Q   ++   Y +   G       DF    
Sbjct: 117  KKKKYIKISFKTIQDLLGVRGQLKPKIDKKKQQDQNSLSIYSNNFNGHMSSTITDFNKLD 176

Query: 187  -LDCIVDLREYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLLEKRV---DLLQRAEVHVC 242
             L+ I D+REYDVPYH R  ID ++R G+W+ +S      L++K V   D+++R ++   
Sbjct: 177  LLEYISDIREYDVPYHSRVCIDLNIRAGKWFKISFKDN--LVDKIVCMEDIVERPDLKYL 234

Query: 243  AFDIETTKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYF 302
            AFDIET+K  L+FPDA  D +MMIS M +G  YLI+NR+  G+D+   +Y P PEFE   
Sbjct: 235  AFDIETSKAELRFPDAKTDCVMMISLMYEGDAYLIVNRDFCGQDVVGFDYAPTPEFECSI 294

Query: 303  KVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCD 362
             V N  NE   ++ +F  + + K  I  ++NGD FDWPF+  R    G  + +E+G   +
Sbjct: 295  TVYNEPNEKACIKKFFDIIVDYKAFIITSFNGDKFDWPFIHERCNQLGLSLEKEIGIHLE 354

Query: 363  KNQGECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEK 422
            +   E   ++  HLDC  WV RD+YLPQGS GLKAVT++KLGY+P+EV+PE+MV  A+  
Sbjct: 355  EG-PEYFGRYLTHLDCLYWVIRDAYLPQGSHGLKAVTRSKLGYEPIEVDPEEMVPLARNN 413

Query: 423  PQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYK 482
             Q +A YSVSDAVATY++Y  ++H FIF+L TIIP   DEVLRKGSGTLCE LLM +A+ 
Sbjct: 414  TQELAEYSVSDAVATYFIYKKHIHDFIFALCTIIPCYSDEVLRKGSGTLCENLLMTEAFN 473

Query: 483  ANVICPNKHQSDPEKFYRNHLLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQLLN 542
             N+I PNK   + EK ++ H L+SETYIGG VECL+SGVFRSD+ + FK + +A++ L++
Sbjct: 474  RNIIFPNKKMEEKEKMHKGHWLDSETYIGGKVECLKSGVFRSDIKSKFKFEKNAFQTLID 533

Query: 543  NLDRDLQYAIKVEGKMDLESVSNYDEVKNAIMEKLLRLQEEP---IREECPLIYHLDVAA 599
            N+D+ L + +++E   +++ V  Y++++ ++++KL  L++ P     +  PLIYHLDVAA
Sbjct: 534  NIDKLLDFVVRIEQNKEVKDVDGYEQLRASVVQKLEFLRDVPNPNCHDAFPLIYHLDVAA 593

Query: 600  MYPNIILTNRLQPPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYYHLKKQ 659
            MYPNIILTNRLQP +IV +++C+ C FN     C R L+W WRGE F   R+++  LK  
Sbjct: 594  MYPNIILTNRLQPVAIVNEQICSGCLFNSAQNECKRPLDWQWRGEYFPLNRNEFEKLKSD 653

Query: 660  IESEFVDGTNGHLSKSFLDLPKMEQQSRLKDRLKKYCQKAYKRVLDKPVTELREAGICMR 719
            +E E     + H + +       E    LK R+K Y QK YK +  K  T  ++  +CMR
Sbjct: 654  LEYERA-ANDQHQNNT------EEFYKALKQRVKTYSQKTYKTIHVKE-TLTKQNTVCMR 705

Query: 720  ENSFYVDTVRSFRDRRYEYKGLNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHK 779
            ENSFY+DTV++FRDRRY +K L KVWKGK  EA   G+++  +EA  M  LY+S+QLAHK
Sbjct: 706  ENSFYIDTVKAFRDRRYTFKHLVKVWKGKADEASKKGDAVGKKEANLMEALYESMQLAHK 765

Query: 780  CILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLP 839
             ILNSFYGYVMRKGARWYSMEMA +VT+ G+ II +A+  ++ +G PLELDTDGIWC+LP
Sbjct: 766  IILNSFYGYVMRKGARWYSMEMAAMVTHIGSSIISDAKAFVDCVGIPLELDTDGIWCLLP 825

Query: 840  GSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIE 899
              FPE+F  K KD  KK  + YPC +LN  V     N QYQTLVDP +  Y+T+ E SI 
Sbjct: 826  EGFPEDFFIKFKD-GKKARMDYPCSILNYLVYEKYCNRQYQTLVDPANLKYQTNLEMSIF 884

Query: 900  FEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELF 959
            FE+DGPY+AMI+PA++EEG L+KKRY VFN  G L ELKGFEIKRR           E+F
Sbjct: 885  FELDGPYRAMIIPAAREEGKLLKKRYVVFNKSGKLTELKGFEIKRR-----------EIF 933

Query: 960  DKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLADYGEQK 1019
             +FL G  ++ECY A A VA +WL+LL N+G+ + + ELIDYI ES  +SK LA+YGEQK
Sbjct: 934  SQFLAGKDLKECYEACAKVAKKWLNLLKNRGEGLNNEELIDYIGESKVLSKELAEYGEQK 993

Query: 1020 SCAVTTARRLSDFLGDTMVKDKGLRCQYIVACEPQGTPVSERAVPVAIFETDAEIMKFYL 1079
               +T A+RL + LG  +VK K L C Y+++ +PQ    +ERA+P+ IF +D  I K +L
Sbjct: 994  GVGITCAKRLKELLGPDIVKGKSLCCNYVMSKKPQEASKAERAIPIQIFNSDPTIKKKFL 1053

Query: 1080 RKWCKTSS----DVGIRSIVDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLY 1135
            RKW K ++     + +R I+DW YY +RLS+ IQKII IPAA Q V N +P V  PDWL 
Sbjct: 1054 RKWLKDNTLDDKQLEMREILDWDYYIERLSNTIQKIIIIPAATQGVFNILPDVSVPDWLT 1113

Query: 1136 KKVREKEDKFRQRKL 1150
            K+++E+EDKF+Q+KL
Sbjct: 1114 KQIKEQEDKFQQQKL 1128



 Score =  135 bits (339), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 80/306 (26%), Positives = 159/306 (51%), Gaps = 27/306 (8%)

Query: 1478 LTYPGAYRKVSVELKIHHLSVNALLKSNQVNEM--EGGGLFGFDQDMNSGPYNNELCGF- 1534
            +++ G Y   +VE+ I  L++N +  ++++  +  E   L  + +  N    N +   + 
Sbjct: 1620 ISFSGLYTSHTVEIDIGLLALNTIAHADELKNIDKEASKLIDYSRVNNKQNKNKKGVQYQ 1679

Query: 1535 -------DETTSSAPAFRVVKQLIQRCLTDAVTSGNVFADAILQHLYRWLCSPHSKLHDP 1587
                   DE T +  +F+ ++Q++Q  + D     N  AD  + +++ WL +  SK +DP
Sbjct: 1680 QQDHEEIDELTQAKQSFKNLQQMVQYWIHDVQQFENPIADFFITNIHSWLTTKESKFYDP 1739

Query: 1588 VLHRILHKVMQKVFAMLLAEFRKLGATIIFANFSKVIIDTGKFDLSAAKAYCDSLLKALQ 1647
            +L ++L K+M+K+F   +++ R LGA I+ +  +K+I+DTGK  L+ AK+Y   +L+ + 
Sbjct: 1740 ILSKMLQKLMKKIFQYFISKLRGLGAKIVHSTMNKIILDTGKNTLNEAKSYTQYILQTVL 1799

Query: 1648 TRELFEWIELEPVHFWHSLLFMDQYNYGGIP------ARADESLDDDSQVDIVSSWNIAE 1701
             + LF+ + L P  ++  LLF D +NY  +          +    + +Q  ++S+W+I++
Sbjct: 1800 GQPLFKVLTLTPQRYFKILLFKDSHNYMALQEFDSSNEEKETGQPNQTQHSVISNWHISD 1859

Query: 1702 YLPKEIQDHFVLVVSEFMYIPWKHAQKLAASRASLQEGSSCTPSITVAAAENFESHIVQY 1761
            +LP +++ +F LVV E++Y       K+   +A L    +  P       E  ES   +Y
Sbjct: 1860 FLPPKLKHYFQLVVLEYLY-------KITQQKAEL----ATNPEYANTLVEEIESFCKKY 1908

Query: 1762 VKGEIS 1767
            +   +S
Sbjct: 1909 ISVNLS 1914



 Score =  103 bits (257), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 52/188 (27%), Positives = 102/188 (54%), Gaps = 21/188 (11%)

Query: 1809 DAPLEFIKHVCAAFALDQNVQHDVLVMRKNLLKYVRVREFAPEAEFRDPCPSFILPNVIC 1868
            ++ LEF+  +   F+LDQNV+ +++ ++++ LK++++ +F+ EA+F++PC      +++C
Sbjct: 2121 NSILEFVNFLMHVFSLDQNVKDELIQVKRDCLKFLKMNDFSNEAQFKEPCVIIKAADIVC 2180

Query: 1869 SYCNDCRDLDLCRDMALLAQDWHCAMPQCGQPYDREVMENALLQIVRQRERLYHLQDLVC 1928
              C    +LD+ RD      DW C   +C  PYD   +EN  +++++     Y  QD+ C
Sbjct: 2181 KSCLQVCELDIFRD------DWICQ--ECRTPYDLHYLENKFIELIKNSLTFYQFQDIYC 2232

Query: 1929 IRCNQVKAAHLAEQCACAGSFRCKEDAS-------DFRSKMQIFLNIANRQGF----QLL 1977
             +C  +K   L+  C C+GS+  + D +       D +   + F  +A    F    Q++
Sbjct: 2233 KKCKMIKEDLLSNLCKCSGSYFFQIDENILPIIGPDSKKIRRAFTELAQTNNFNTLLQMI 2292

Query: 1978 QECTSWIL 1985
            Q+  +WI+
Sbjct: 2293 QQ--TWII 2298


>gi|145490728|ref|XP_001431364.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124398468|emb|CAK63966.1| unnamed protein product [Paramecium tetraurelia]
          Length = 2209

 Score = 1059 bits (2739), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 580/1437 (40%), Positives = 840/1437 (58%), Gaps = 131/1437 (9%)

Query: 13   RTKKQKLIRSAEEELEAKLGYDLFSEGDKRLGWLLTFASSSLEDEDTRKVYSCIDLYFVS 72
            R +KQ L+    +E+E K   +      + L W+      S  DE + K ++ + +Y ++
Sbjct: 2    RKQKQNLL----DEIELKFNVEWVRSQKELLAWVANMKVISTYDE-SEKEFTALLVYVIT 56

Query: 73   QDGSTF-KSKYKFRPYFYAATKEKMEMDVEAYLRRRYESQIADIEILEKEDLDLKNHLSG 131
            Q+G+ F K  Y   PYFY    ++   ++  +L  +YE QI  ++I+E+ DLD  NHL G
Sbjct: 57   QNGTIFLKLMYDIPPYFYVECNQEHITELAMHLENKYEKQILKVDIIERVDLDKANHLIG 116

Query: 132  LHKSYLKISFDTVQQLMDVKKDLLHVVERNQAKFDAAEAYESILTGKREQRPQDFLDCIV 191
              + ++K+ F  +Q L+ V+  +    E+N+   D     E+ +  K+    +D  D ++
Sbjct: 117  KKEKFIKLQFRLIQDLVQVRNLIRARCEKNRRNVD-----ENDMLIKKPSTSKDIQDQLI 171

Query: 192  DLREYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLLEKRV-------DLLQRAEVHVCAF 244
             +REYDVPYH R  ID  +RC +W+   +       E+R+       +++   E+   AF
Sbjct: 172  GVREYDVPYHCRVCIDTGLRCCKWFKFVLK------ERRIAECIEVKEMMSMPELKYLAF 225

Query: 245  DIETTKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKV 304
            DIET K PLKFPDA  D IMMIS        LI N + +G+++++ +Y PKPEF     +
Sbjct: 226  DIETYKQPLKFPDAKNDQIMMISITHSQNSILITNMQTLGQEVQNFDYAPKPEFATQAII 285

Query: 305  TNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDKN 364
             N  +E  LL  +F  + + KP I  ++NGD FDWP++E R   HGF + +E+G + ++ 
Sbjct: 286  YNQPDEKSLLLKFFQVILDYKPNIISSFNGDRFDWPYIEERCLTHGFYLEQEIGIKKNEE 345

Query: 365  QGECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQ 424
              E   ++  H+DCFAWV+RD+YLPQGS GLKAVTKAKLGY P+EV+PE MV  A +  Q
Sbjct: 346  NNEYYGRYIIHMDCFAWVERDAYLPQGSHGLKAVTKAKLGYQPIEVDPEKMVPMALQDSQ 405

Query: 425  MMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKAN 484
              A YS+SD+VATY+LY  ++H FI +L TIIP+SPDEVLRKGSGTLCE LLM QA++  
Sbjct: 406  QFAGYSISDSVATYWLYRKHIHDFILALCTIIPLSPDEVLRKGSGTLCECLLMAQAFQRE 465

Query: 485  VICPNKHQSDPEKFYRNHLLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQLLNNL 544
            +I PNK  +  E+F+  HL++SETYIGG VECL SG++RSD+   FK+D    + + + +
Sbjct: 466  IIFPNKTTTLLERFHDGHLIDSETYIGGKVECLRSGIYRSDIDVEFKIDKECMQSMWSTV 525

Query: 545  DRDLQYAIKVEGK-MDLESVSNYDEVKNAIMEKLLRLQEEPIREECPLIYHLDVAAMYPN 603
            D  +++  K+E +    E +    E   + ++ L+   E  + +E PLIYHLDVAAMYPN
Sbjct: 526  DSLIRFVGKIENETFSEEEIEKCSEQIRSKLDVLINRGE--VFKEKPLIYHLDVAAMYPN 583

Query: 604  IILTNRLQPPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYYHLKKQIESE 663
            IILTNRLQP SIV D++C+ C FN+P   C R+LEW W+G+ F  KR++Y  +K+Q+E E
Sbjct: 584  IILTNRLQPVSIVGDQICSQCYFNQPQNRCQRQLEWQWKGDFFPLKRTEYEFVKQQLEQE 643

Query: 664  ----------------FVDG--TNGHLSKSFLDLPKMEQQSRLKDRLKKYCQKAYKRVLD 705
                              +G  T     K F DL   EQ  R+K R+ ++C+K YK +  
Sbjct: 644  QTEKERKENEEKKKQMLKEGLDTRRLQLKGFSDLAPDEQIKRIKQRVIEHCKKTYKTIHH 703

Query: 706  KPVTELREAGICMRENSFYVDTVRSFRDRRYEYKGLNKVWKGKLSEAKASGNSIKIQEAQ 765
              V EL++  +CMREN FYV TVR FRDRRYE+K L KV+K KL +AK  G  + ++E  
Sbjct: 704  HSV-ELKKDTVCMRENDFYVQTVRDFRDRRYEFKELVKVYKNKLEQAKKEG--VGVKECH 760

Query: 766  DMVVLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGK 825
            D + LY+SLQLAHK ILNSFYGYVMRKGARWYSM MAG+VT+ G++II  A+  +++IG 
Sbjct: 761  DFMALYESLQLAHKIILNSFYGYVMRKGARWYSMPMAGIVTHMGSQIISTAKQRVDQIGL 820

Query: 826  PLELDTDGIWCVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDP 885
            PLELDTDGIWC+LP  FPE+F  K++   + L  SYPC +LN  V     N+QYQ L DP
Sbjct: 821  PLELDTDGIWCLLPSGFPEDFLIKSQT-GRNLKFSYPCYILNELVYEKYKNNQYQWLKDP 879

Query: 886  VSKTYETHSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRR 945
             S  Y   SE SI FEVDGPY+ MI+PA++EE   +KKRY V+N +G++AE+KGFEIKRR
Sbjct: 880  NSFEYGIRSEMSIFFEVDGPYRCMIIPAAREENKQLKKRYVVYNKNGSIAEVKGFEIKRR 939

Query: 946  GELKLIKVFQAELFDKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISES 1005
            GEL++IK FQ ELF +FL G+ + ECY A A V  + L +L   G+ I+  EL+D I ES
Sbjct: 940  GELQIIKQFQQELFSEFLKGTNLTECYQACAEVGKKLLRILMTGGEGISQQELLDLIGES 999

Query: 1006 STMSKSLADYGEQKSCAVTTARRLSDFLGDTMVKDKGLRCQYIVACEPQGTPVSERAVPV 1065
              +SK +++Y  +K  A+T  +R++++LG   V+   L CQYI+   P  TPV+ER++P+
Sbjct: 1000 RVLSKEISEYDNKKGVAITAGKRIAEYLGSDQVRGGSLNCQYIITKLPHNTPVNERSIPL 1059

Query: 1066 AIFETDAEIMKFYLRKWCK----TSSDVGIRSIVDWSYYKQRLSSAIQKIITIPAAMQKV 1121
             IFE+  E  K YLRKW K       D+ +  IVDW YY +RL + I K++ IPAA+Q +
Sbjct: 1060 LIFESSFETRKKYLRKWLKEPQLQDEDLTLSKIVDWDYYIERLKNTILKLLVIPAALQNI 1119

Query: 1122 SNPVPRVVHPDWLYKKVREKEDKFRQRKLVDIFSSLKKDDFLNKTCNAETNLMDENVEDL 1181
             NP+P+V  P+WL KK+REK    +Q K+   FS + K    ++    +   MD  +E+ 
Sbjct: 1120 ENPIPQVEPPEWLLKKLREKASGLQQTKINQYFSQINK--LAHQLAQFKFQPMD--IEEN 1175

Query: 1182 EDFPKKRRNSVNGPRPIVRCFEVNNEQKTVKTTDQVDSLRQQLEPSEVSDQQPSSQNAID 1241
            +    K++  +N                                     D Q    N  +
Sbjct: 1176 KQLSNKKKLQIN------------------------------------EDNQKQLHNQYN 1199

Query: 1242 TENIDRIVDYKGWLELKKRKWKDNLDRRKKQKLGSLRASHQANGVSESLGDMINHKEAQR 1301
             E      D+K +L+++K+ W      +++ K          NG   +L +MI   + Q 
Sbjct: 1200 ME-----TDFKNFLQVQKQIWTKEFRNKQQNK--------NINGRG-NLKNMIKFNKQQL 1245

Query: 1302 RTGVGSYFRRQETAMTRCHWQIIQLVPSSQSGVFLAWVVVE-GIMVRIPITVPRLFYLN- 1359
               V               WQ++Q     + G+FL W+++E G +  + I V R  Y N 
Sbjct: 1246 LNSV---------------WQVLQFY-EVEPGLFLTWILLENGTLTSVQIQVDRTIYTNQ 1289

Query: 1360 -SKDPIVEKFPGRRVNKTLPHGRRSFNLIEVMIDEDQFRKESKKLAALLADPEVEVL 1415
             +K+P ++      + KTLP  ++   L  + +DE  F+ E K+L    A+P  E L
Sbjct: 1290 LTKEPELQT-----IKKTLPRDKKVHYLYPLTMDESAFQLEHKQLFQYEANPNTESL 1341



 Score =  107 bits (266), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 78/310 (25%), Positives = 152/310 (49%), Gaps = 21/310 (6%)

Query: 1481 PGAYRKVSVELKIHHLSVNALLKSNQVNEM--EGGGLFGFDQDMNSGPYNNELCGFDETT 1538
            PG Y   + E+ I H S+N + +S ++  +  E   L G  Q+  S   +N     DE  
Sbjct: 1645 PGIYIGYTCEIDILHFSINTIAQSEEIKNLDKEASQLVG--QNGKSDMLDN----LDELG 1698

Query: 1539 SSAPAFRVVKQLIQRCLTDAVTSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQ 1598
             +  AFR+++ L+   L D    G   +D  + ++  W+ S  S L+DP L ++L+++  
Sbjct: 1699 GAKIAFRLLQMLVSSWLDDIYAKGEKVSDDHILNINIWIYSGLSPLYDPYLGKLLNRLNF 1758

Query: 1599 KVFAMLLAEFRKLGATIIFANFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELE 1658
            K F++L  + ++ G  I+ A+ +K+++ TGK     AK+  + ++   Q   LF+ +  +
Sbjct: 1759 KFFSILTNKLKEFGIKIVKASPTKLLLYTGKQQKDMAKSLIEYIINTFQQSNLFKHVTFK 1818

Query: 1659 PVHFWHSLLFMDQYNYGGIPARADESLDDDSQVDIVSSWNIAEYLPKEIQDHFVLVVSEF 1718
               F+ SL++ D++NY G     D + DD   VD      + ++LP  +   FV ++ E 
Sbjct: 1819 AQKFFTSLIYKDKHNYLG--KDVDYNTDD---VDFDYKLKLQDFLPPILSSLFVRLLFEI 1873

Query: 1719 MYIPWKHAQKLAASRASLQEGSSCTPS-ITVAAAENFESHIVQYVKGEISSYFTGKLLSI 1777
            +        K+   R+S  E  +  P+ + ++   N ++ I+  +   I+S ++ ++  I
Sbjct: 1874 LL-------KVEELRSSQIEEINILPTNLQISRITNLQTDIINLLVQYINSSYSQRIYDI 1926

Query: 1778 VRDAIHHMKK 1787
            + D     KK
Sbjct: 1927 IIDQSEKYKK 1936



 Score = 90.1 bits (222), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 46/145 (31%), Positives = 74/145 (51%), Gaps = 8/145 (5%)

Query: 1810 APLEFIKHVCAAFALDQNVQHDVLVMRKNLLKYVRVREFAPEAEFRDPCPSFILPNVICS 1869
            A L    ++CA  ++D+ V   +  ++    K V+V E + EAEF DPC   IL NV C 
Sbjct: 2035 AILRTFIYLCAILSVDEEVHQQMKRIKNVCCKTVKVSESSKEAEFEDPCFDLILQNVPCY 2094

Query: 1870 YCNDCRDLDLCRDMALLAQDWHCAMPQCGQPYDREVMENALLQIVRQRERLYHLQDLVCI 1929
             C   +++++ +D+      W C    C   YD + ME  + Q V Q+   Y +QDL C+
Sbjct: 2095 QCYMVQEVNVFKDI------WKCE--GCKNDYDLDTMEKLICQFVEQQLLFYQIQDLYCV 2146

Query: 1930 RCNQVKAAHLAEQCACAGSFRCKED 1954
            +C Q +     + C+C+  F+ K D
Sbjct: 2147 KCKQTQDYSFQKICSCSAQFQLKSD 2171


>gi|340508170|gb|EGR33934.1| DNA-directed polymerase epsilon, putative [Ichthyophthirius
            multifiliis]
          Length = 1148

 Score = 1059 bits (2739), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 530/1111 (47%), Positives = 750/1111 (67%), Gaps = 37/1111 (3%)

Query: 24   EEELEAKLGYDLFSEGDKRLGWLLTFASSSLEDEDTRKVYSCIDLYFVSQDGSTFKSKYK 83
            +E ++ K G +   +G  RLG++  F +S ++DE+  +  S + +Y++ ++G+  KS  +
Sbjct: 8    QELVDKKFGIETVKDGRDRLGFIANFKTSIIKDEELNE-RSVLQIYYIEENGNWCKSIIQ 66

Query: 84   FRPYFYAATKEKMEMDVEAYLRRRYESQIADIEILEKEDLDLKNHLSGLHKSYLKISFDT 143
            + PYFY + +  +E ++  +L ++Y+  I+ +EI+EK DL++ NHLSG  K Y+K+ F+T
Sbjct: 67   YNPYFYLSCENNLEKEIAFFLEKKYQKNISKVEIIEKVDLEMPNHLSGRKKKYIKLKFNT 126

Query: 144  VQQLMDVKKDLLHVVERNQAK--FDAAEAYESILTGKREQRPQ--------DFLDCIVDL 193
            V +LM V         RNQ K   D  + Y+ ++   +   P+        D  + I D+
Sbjct: 127  VSELMYV---------RNQIKPQIDRRKQYKPVIQNTQTLFPETINLNKNTDLTEYITDI 177

Query: 194  REYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLLEKRV---DLLQRAEVHVCAFDIETTK 250
            REYDVPYH R  ID ++R  +WY +S      ++ + V   ++++R E+   AFDIET+K
Sbjct: 178  REYDVPYHSRVCIDLNIRAAKWYKISFKDN--VVNQIVCMENIVERPELKYLAFDIETSK 235

Query: 251  LPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNVNNE 310
              L+FPDA  D++MMIS M +G  YLI+NRE  G+D+E  EY PKPEFE    + NV NE
Sbjct: 236  AQLQFPDAKIDVVMMISLMYEGDAYLIVNREFCGQDVEGFEYAPKPEFECTVNIFNVKNE 295

Query: 311  IELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDKNQGECRA 370
             E ++ +F  +   +  I  ++NGD FDWPF+  R    G  + +E+G   ++   E   
Sbjct: 296  YECIKKFFDIIVSYRAFIITSFNGDKFDWPFIHERCNQVGLSLEKEIGINLEEGP-EYFG 354

Query: 371  KFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQMMASYS 430
            +F  HLDC  WV RD+YLPQGS GLK+VTKAKLGY P+EV+PE MV  AKE  Q++A YS
Sbjct: 355  RFITHLDCLYWVIRDAYLPQGSHGLKSVTKAKLGYQPIEVDPEKMVFLAKENTQILAEYS 414

Query: 431  VSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVICPNK 490
            VSDAVATY+LY  ++H FIF+L TIIP   DEVLRKGSGTLCE LLM +A+  N+I PNK
Sbjct: 415  VSDAVATYFLYKKHIHDFIFALCTIIPCYSDEVLRKGSGTLCENLLMTEAFNRNIIFPNK 474

Query: 491  HQSDPEKFYRNHLLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQLLNNLDRDLQY 550
               + EK ++ H L+SETY GG VECL SGVFRSD+ T F+L+ +A++ L++N+D+ L++
Sbjct: 475  KMENKEKMHKGHWLDSETYQGGKVECLRSGVFRSDIKTKFQLEKNAFQTLIDNVDKLLEF 534

Query: 551  AIKVEGKMDLESVSNYDEVKNAIMEKLLRLQEEP---IREECPLIYHLDVAAMYPNIILT 607
             +K+E    +E + NY++V+N I+E L +L++ P     E+ PLIYHLDVAAMYPNIILT
Sbjct: 535  VMKIEQNRQVEELENYEDVRNQIVEGLEKLRDIPNVNNYEDYPLIYHLDVAAMYPNIILT 594

Query: 608  NRLQPPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYYHLKKQIESE-FVD 666
            NRLQP +IV +++C++C FN P   C R LEW+W+GE F   RS++  +K  +E E  ++
Sbjct: 595  NRLQPVAIVNEQICSSCLFNSPENQCKRPLEWMWKGEYFPLNRSEFETIKSNLEYERALN 654

Query: 667  GTNGHLSKSFLDLPKMEQ-QSRLKDRLKKYCQKAYKRVLDKPVTELREAGICMRENSFYV 725
              N +  K++ ++   E    +LK R+K Y QK YK  +    T L++  +CMRENSFY+
Sbjct: 655  SENNNKDKNYYEINNTEDFYKQLKQRVKVYSQKTYK-TMHISETTLKQNTVCMRENSFYI 713

Query: 726  DTVRSFRDRRYEYKGLNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHKCILNSF 785
            DTVR+FRDRRY YK L KVWKGK  EA   G++   +EA ++  LY+S+QLAHK ILNSF
Sbjct: 714  DTVRAFRDRRYTYKTLVKVWKGKAEEASQKGDTEGKKEAGNLEALYESMQLAHKIILNSF 773

Query: 786  YGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLPGSFPEN 845
            YGYVMRKGARWYSMEMA +VT+ G+ II +A+  I+ +GKPLELDTDGIWC+LP  FPE+
Sbjct: 774  YGYVMRKGARWYSMEMAAMVTHIGSSIILDAKNFIDCVGKPLELDTDGIWCLLPKGFPES 833

Query: 846  FTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEFEVDGP 905
            F  K  D  KK  I YPC +LN  +     NDQYQTL D  +  YE++ E SI FE+DGP
Sbjct: 834  FQLKFVD-GKKWKIEYPCSILNYLIYEKYCNDQYQTLKDETNLKYESNKEMSIFFELDGP 892

Query: 906  YKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFLHG 965
            YKAM++PA++EEG L+KK Y V+N +G +AE+KGFEIKRRGEL+++K+FQ+E+F +F  G
Sbjct: 893  YKAMVIPAAREEGKLLKKGYVVYNHNGKIAEIKGFEIKRRGELEILKIFQSEIFSEFPAG 952

Query: 966  STIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLADYGEQKSCAVTT 1025
            S+++ECY A A VA +WL+LL  +G+ + D ELIDYI ++  +SK L DYGEQK   +T 
Sbjct: 953  SSLKECYEACAFVARKWLNLLIMKGQGLTDDELIDYICQTKVLSKQLQDYGEQKGVGLTC 1012

Query: 1026 ARRLSDFLGDTMVKDKGLRCQYIVACEPQGTPVSERAVPVAIFETDAEIMKFYLRKWCKT 1085
            A+RL +FLG  + K K L C Y+++ +P     +ERA+PV IF +D EI K +L+KW K 
Sbjct: 1013 AKRLKEFLGPDVAKGKSLNCIYVMSAKPVELSRAERAIPVQIFGSDNEIRKRFLKKWLKD 1072

Query: 1086 SS----DVGIRSIVDWSYYKQRLSSAIQKII 1112
            +S     + +R+I+DW YY +RL+  I +II
Sbjct: 1073 NSLGDEQLELRNILDWDYYIERLNWHILQII 1103


>gi|159490578|ref|XP_001703250.1| DNA polymerase epsilon catalytic subunit A/1 [Chlamydomonas
            reinhardtii]
 gi|158280174|gb|EDP05932.1| DNA polymerase epsilon catalytic subunit A/1 [Chlamydomonas
            reinhardtii]
          Length = 2367

 Score = 1025 bits (2651), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 551/1074 (51%), Positives = 654/1074 (60%), Gaps = 230/1074 (21%)

Query: 184  QDFLDCIVDLREYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLLEKRVDLLQRAEVHVCA 243
            QD  +  +++REYDVPYHIRFAID DVR G WY V        L++R DLLQRAE  +CA
Sbjct: 244  QDIREAFLEMREYDVPYHIRFAIDTDVRVGHWYTVRCHEGVTSLDRRHDLLQRAEPRICA 303

Query: 244  FDIETTKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFK 303
            FDIETTKLPL+FP+A+YD + MISYMLD QGYLI+NRE VG DI D EYTPKPEFEG FK
Sbjct: 304  FDIETTKLPLQFPNAEYDQVFMISYMLDRQGYLIVNREVVGADIADFEYTPKPEFEGPFK 363

Query: 304  VTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDK 363
            VTN  NE ELL+ +F+HM+  +P IYVTYNGD+FD+PF+E R A  G  M E +GF+C  
Sbjct: 364  VTNAANERELLQAFFSHMRSAQPAIYVTYNGDFFDFPFIEARCAVLGLDMHESIGFRCRG 423

Query: 364  NQG-------ECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMV 416
             QG       EC ++ A H+DC  WV RDSYLPQGS+GLK+VTK KLGYDP+EV+PEDMV
Sbjct: 424  GQGSGPGAAKECLSRSAVHMDCMHWVDRDSYLPQGSRGLKSVTKYKLGYDPVEVHPEDMV 483

Query: 417  RFAKEKPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLL 476
            R A+E PQ MASYSVSDAV+TYYLYMTYVHPFIFSLATIIPM PDEVLRKGSGTLCE LL
Sbjct: 484  RLARETPQAMASYSVSDAVSTYYLYMTYVHPFIFSLATIIPMPPDEVLRKGSGTLCEQLL 543

Query: 477  MVQAYKANVICPNKHQSDPEKFYRNHLLESETYIGGHVECLESGVFRSDLPTSFKLDPSA 536
            MV+AY+AN+ CPNKH  + E  YR HLL++ETYIGG                        
Sbjct: 544  MVEAYRANIACPNKHVGEREAMYRGHLLQAETYIGG------------------------ 579

Query: 537  YEQLLNNLDRDLQYAIKVEGKMDL--ESVSNYDEVKNAIMEKLLRLQEEPIREECPLIYH 594
             + LL+NLDRDL YA+  E K     E  +NY  V+ AI  KL  L++ P R        
Sbjct: 580  -KMLLDNLDRDLGYALVHEAKWGAGQEDAANYAAVREAIAAKLTALRDAPNR-------- 630

Query: 595  LDVAAMYPNIILTNRLQPPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYY 654
                               +IVT+E C ACDFN PGK CLR++EWVWRGE +   RS+Y 
Sbjct: 631  -------------------AIVTEEDCAACDFNAPGKRCLRQMEWVWRGEHYSASRSEYL 671

Query: 655  HLKKQIESEFVDGTNGHLSKS-------------------------------------FL 677
             +K Q+ +E           S                                     + 
Sbjct: 672  QIKAQLAAETFPPAPPRFPNSGFGGGGGGGGGGGYGGGGGYGGGGGGGADGDMGGPRTWA 731

Query: 678  DLPKMEQQSRLKDRLKKYCQKAYKRVLDKPVTELREAGICMRENSFYVDTVRSFRDRRYE 737
            +L + EQQ  L++RLKKYCQK YKRVLDKPVTELR AGIC RENSFY+DT          
Sbjct: 732  ELGQEEQQKFLQERLKKYCQKVYKRVLDKPVTELRVAGICQRENSFYIDT---------- 781

Query: 738  YKGLNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHKCILNSFYGYVMRKGARWY 797
                  VWKGKL EAKA GN +KIQEA DM VLY+SLQLAHKCILNSFYGYVMRKGARWY
Sbjct: 782  ------VWKGKLDEAKAGGNPLKIQEAADMCVLYESLQLAHKCILNSFYGYVMRKGARWY 835

Query: 798  SMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLPGSFPENFTFKTKDLKKKL 857
            SMEMAGVVTYTGA IIQ A  L+  +G+ LELDTDGIWC LPGSFPENF FK K+  K+ 
Sbjct: 836  SMEMAGVVTYTGANIIQRANKLVLDLGRTLELDTDGIWCALPGSFPENFKFKNKN-GKEF 894

Query: 858  TISYPCVMLNVDVARNNTNDQYQTLVDPVSKT--------YETHSECSIEFEVDGPYK-- 907
             +SYPC +LNV VA++NTNDQYQTLV P            Y   SE SIEFEVDGPYK  
Sbjct: 895  KLSYPCCVLNVMVAQHNTNDQYQTLVQPPPGQPPPAGPPRYTVSSEMSIEFEVDGPYKRH 954

Query: 908  ------------------------------------AMILPASKEEGILIKKRYAVFNDD 931
                                                AMILPASKEEG  IKKRYAVFN D
Sbjct: 955  QQPQTPPLQPATPIPSPPPPRPRPPPPCIYGPAPEPAMILPASKEEGKSIKKRYAVFNFD 1014

Query: 932  GTLAELKGFEIKRRGELKLIKVFQAELFDKFLHGSTIEECYSAVAAVANRWLDLLDNQGK 991
            G+LAELKGFE+KRRGELKLIKV +                 S   + ANR          
Sbjct: 1015 GSLAELKGFEVKRRGELKLIKVSR-------------RSRKSCAISTANR---------- 1051

Query: 992  DIADSELIDYISESSTMSKSLADYGEQKSCAVTTARRLSDFLGDTMVKDKGLRCQYIVAC 1051
                  L  ++ +     K L       +C    AR                        
Sbjct: 1052 ------LAAFLGDERIKDKGL-------NCTYVIAR------------------------ 1074

Query: 1052 EPQGTPVSERAVPVAIFETDAEIMKFYLRKWCKTSSDVG-------IRSIVDWSYYKQRL 1104
            +P   P SERA+PV+IF+ +  + + +LRKWC    DVG       +R IVDW YY++RL
Sbjct: 1075 QPASQPTSERAIPVSIFQAEPAVARAWLRKWC--GGDVGSTDGVPDVRDIVDWDYYRERL 1132

Query: 1105 SSAIQKIITIPAAMQKVSNPVPRVVHPDWLYKKVREKEDKFRQRKLVDIFSSLK 1158
             SA+QKIITIPAA+Q ++NPVPRV HPDWL+K++RE+ DK +Q K+ D+ + ++
Sbjct: 1133 GSAVQKIITIPAALQGLANPVPRVKHPDWLHKRIRERTDKCQQLKMHDLLARMR 1186



 Score =  213 bits (541), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 163/577 (28%), Positives = 248/577 (42%), Gaps = 134/577 (23%)

Query: 1415 LGWQQNAAKIGMQRCAASSQWFNERISLARYAH--------------------------- 1447
            L WQ  AA+  + RCA +  W  ER +L RYAH                           
Sbjct: 1710 LQWQARAARRALHRCAGAGLWLAERAALCRYAHAPLANLDPSGGGCGAGAGGAGGAGGAG 1769

Query: 1448 --------------------------ILWISDDGVPDLGGT------SEEDECFADEVH- 1474
                                       L + D  +PDLGGT        ED    + V  
Sbjct: 1770 GGEALGGGIGSVADMLMCRRLRDAGLTLPVVDPALPDLGGTETAEGDPREDSGAGEAVFN 1829

Query: 1475 ----QPVLTYPGAYRKVSVELKIHHLSVNALLKSNQVNEMEGGGLFGFDQDMNSGPYNNE 1530
                +  L YPG YR V V L++HHL+V A+  +  + E+                    
Sbjct: 1830 AGRPRSELHYPGVYRSVCVTLRLHHLAVAAVEAAEALAEL-----------EGGAVGGAG 1878

Query: 1531 LCGFDETTSSAPAFRVVKQLIQRCLTDAVTSGNVFADAILQHLYRWLCSPHSKLHDPVLH 1590
              G       +  F+V++ L    + DA  + N+ AD +LQ+LYRWL SP S LHDP LH
Sbjct: 1879 GAGAGGAGVGSGVFKVLRALQAAWIRDATANRNMIADTLLQNLYRWLSSPASPLHDPGLH 1938

Query: 1591 RILHKVMQKVFAMLLAEFRKLGATIIFANFSKVIIDTGKFDLSAAKAYCDSLLKALQTRE 1650
            R +  +  K+F  L AE R+LGA I+ AN + + I TGK  + AA  Y   LL AL+ RE
Sbjct: 1939 RAVLVLQHKLFLQLCAELRRLGAVIVAANTNAITICTGKRHVRAAAGYTRFLLDALKGRE 1998

Query: 1651 LFEWIELEPVHFWHSLLFMDQYNYGGIPARADES-------------------------- 1684
            LF W++L P  ++H+ ++ D YN+ G+ + A  +                          
Sbjct: 1999 LFRWLDLHPAAWYHAYMYRDGYNWAGLESAAAPAEWRRLAEAGAGAGTAAAAEEEAGQEG 2058

Query: 1685 -----LDDDSQVDIVSSWNIAEYLPKEIQDHFVLVVSEFMYIPWKHAQKLAASR------ 1733
                  DD+  V  V  WN+ E+LP  +Q   VL+++EF+Y+PW+ A+K    +      
Sbjct: 2059 DAAAAADDEPVVKFV--WNLKEHLPPAVQQDLVLLLTEFLYLPWREARKALQQQQQQQQA 2116

Query: 1734 ---------------ASLQEGSSCTPSITVAAAENFESHIVQYVKGEISSYFTGKLLSIV 1778
                               +G S   ++    AE  +S    ++   ++  FT +LL+ V
Sbjct: 2117 GAAAAGADAGGGSQAVPASQGGSTQAAVASTRAEEVQS---TFLGSLVADVFTQRLLARV 2173

Query: 1779 RDAIHHMKKMNNDQHNSPGVMQTAANIHKVDAP-LEFIKHVCAAFALDQNVQHDVLVMRK 1837
                  +   +  +   P +  +     ++  P L F++      ALD  V   VL++R+
Sbjct: 2174 -SVWRAVTPGSAPEWTFPQLAGSYLRPDELGHPALAFVRVATHLLALDGRVGEAVLLLRR 2232

Query: 1838 NLLKYVRVREFAPEAEFRDPCPSFILPNVICSYCNDC 1874
             LLK + V EF+ EAEF++ C  F++P+VICS C  C
Sbjct: 2233 QLLKALHVNEFSTEAEFKELCQPFVMPDVICSLCGLC 2269



 Score =  128 bits (321), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 65/162 (40%), Positives = 97/162 (59%), Gaps = 13/162 (8%)

Query: 23  AEEELEAKLGYDLFSEGDKRLGWLLTFASSSLEDEDTRKVYSCIDLYFV----------- 71
           AE+ L+  LG+ LF+ G+ RLGWL+   SS + D+DT +  S +    V           
Sbjct: 22  AEDALDEGLGWKLFTTGEDRLGWLMNIQSSHMADKDTGQTDSTLPSSGVRRLRGAPPPGC 81

Query: 72  --SQDGSTFKSKYKFRPYFYAATKEKMEMDVEAYLRRRYESQIADIEILEKEDLDLKNHL 129
             S DGS FK++  F PYFY   +E  E++ E YLRR+ E  + ++ ++E+EDLDLKNHL
Sbjct: 82  AASGDGSMFKARLAFAPYFYVRVQEGREVEAENYLRRKCEGAVREVAVVEREDLDLKNHL 141

Query: 130 SGLHKSYLKISFDTVQQLMDVKKDLLHVVERNQAKFDAAEAY 171
           SG+ +  L++S  TVQQLM+V+K++  +V  N  +     AY
Sbjct: 142 SGIRRRLLRVSTYTVQQLMEVRKEVAPLVAANTRRAATTSAY 183



 Score = 55.5 bits (132), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 42/190 (22%), Positives = 73/190 (38%), Gaps = 22/190 (11%)

Query: 1245 IDRIVDYKGWLELKKRKWKDNLDRRKKQKLGSLRASHQANGVSESLGDMINHKEAQRRTG 1304
            +D    Y+GW+  +K +W+      K+++L + +A+        S               
Sbjct: 1298 VDIADSYRGWVAGQKSRWRHMRQDAKRRRLEAAKAAEAVRRAGGSAAAAAAAAAGAAPLS 1357

Query: 1305 VGSYFRRQETAMTRCHWQIIQLVPSSQSGVFLAWVVVEGIMVRIPITVPRLFYLNSKDPI 1364
            + S    Q  A+T   WQ++ LV ++  G    W +  G +  + + VPR F ++S+   
Sbjct: 1358 MRSLLANQAAAVTAVPWQVVALVETATPGHLKMWCLALGKLHSVTLVVPRSFLVDSRLQA 1417

Query: 1365 VEKFPGRRVNK----------------------TLPHGRRSFNLIEVMIDEDQFRKESKK 1402
             E                                LP GRR  +L  V + E  +R E+ +
Sbjct: 1418 PELLAAALSAGVAAGGGGAHGLGLEVAAVGGAVALPGGRRPQHLYRVTLPEAAYRSEAPR 1477

Query: 1403 LAALLADPEV 1412
            LAA L+   V
Sbjct: 1478 LAAALSAEHV 1487


>gi|328349848|emb|CCA36248.1| DNA polymerase epsilon subunit 1 [Komagataella pastoris CBS 7435]
          Length = 1789

 Score = 1020 bits (2638), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 520/1052 (49%), Positives = 698/1052 (66%), Gaps = 61/1052 (5%)

Query: 376  LDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQMMASYSVSDAV 435
            +DC+ WVKRDSYLPQGSQGLKAVT  KLGY+P E++PE M  +A EKPQ++A YSVSDAV
Sbjct: 1    MDCYRWVKRDSYLPQGSQGLKAVTTVKLGYNPTELDPELMTPYAYEKPQLLAEYSVSDAV 60

Query: 436  ATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVICPNKHQSDP 495
            ATYYLY  YVHPF+FSL TIIP++PDEVLRKG+GTLCEMLLMVQAY+ N++ PNKH    
Sbjct: 61   ATYYLYYKYVHPFVFSLCTIIPLNPDEVLRKGTGTLCEMLLMVQAYENNILLPNKHTDPL 120

Query: 496  EKFYRNHLLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQLLNNLDRDLQYAIKVE 555
            E+FY  HL+ESETY+GGHVE LE+GVFRSD+ T F++DP+A +++L+ LD+ L+++I+VE
Sbjct: 121  ERFYEGHLIESETYVGGHVESLEAGVFRSDISTDFRIDPTAIDEILSTLDQSLKFSIEVE 180

Query: 556  GKMDLESVSNYDEVKNAIMEKLLRLQEEPIREECPLIYHLDVAAMYPNIILTNRLQPPSI 615
             K  L+ ++NYDE+ + I  +LL L+  P R E PLIYH+DVA+MYPNI+ TNRLQP S+
Sbjct: 181  SKKQLKDITNYDEIYDKIKGELLELKNNPKRHEAPLIYHVDVASMYPNIMTTNRLQPDSM 240

Query: 616  VTDEVCTACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYYHLKKQIESE-FVDGTNGHLSK 674
             TD+ C  CDFNRPGKTC R+L W WRGE +    S+Y  ++  + ++ F         K
Sbjct: 241  KTDQDCAECDFNRPGKTCDRRLLWAWRGEFYPADYSEYKMIEHALSNDTFAPDKPWLPRK 300

Query: 675  SFLDLPKMEQQSRLKDRLKKYCQKAYKRVLDKPVTELREAGICMRENSFYVDTVRSFRDR 734
            +F  L  +++ + +K  L +Y +K Y R+      E +EA +C REN FYV+TVRSFRDR
Sbjct: 301  TFDQLSHIQRAALVKSNLSEYSRKVYHRIKQTKTIE-KEAIVCQRENPFYVNTVRSFRDR 359

Query: 735  RYEYKGLNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHKCILNSFYGYVMRKGA 794
            RYE+KGL KVWKGK S+         + EA+ M+VLYDSLQLAHK ILNSFYGYVMRKG+
Sbjct: 360  RYEFKGLAKVWKGKASKIPKDDRH-SLDEAKKMIVLYDSLQLAHKVILNSFYGYVMRKGS 418

Query: 795  RWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLPGSFPENFTFKTKDLK 854
            RWYS+EMAG+   TGA IIQ AR L+E++G+PLELDTDGIWC+LP SFPE+F FK KD  
Sbjct: 419  RWYSVEMAGITCLTGATIIQLARSLVERLGRPLELDTDGIWCILPSSFPEDFDFKMKD-G 477

Query: 855  KKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEFEVDGPYKAMILPAS 914
            K LT+SYPC MLN  V    TN QYQ LVDPV+  Y+T+S+ SI FE+DGPYKAMILP S
Sbjct: 478  KTLTVSYPCSMLNFLVHEKFTNHQYQELVDPVTHKYKTYSDNSIFFELDGPYKAMILPTS 537

Query: 915  KEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFLHGSTIEECYSA 974
            KEEG  +KKRYAVFN DG+LAELKGFE+KRRGEL+LIK FQ+++F  FLHG T+E CY  
Sbjct: 538  KEEGKGLKKRYAVFNFDGSLAELKGFELKRRGELQLIKNFQSDIFKLFLHGDTLEGCYQT 597

Query: 975  VAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLADYGEQKSCAVTTARRLSDFLG 1034
            VA VANRWLD+LD++G ++ D +LI+ I E+ +MSK+LA+YG QKS ++TTARRL +FLG
Sbjct: 598  VANVANRWLDVLDSKGVNVEDEDLIELICENRSMSKTLAEYGTQKSTSITTARRLGEFLG 657

Query: 1035 DTMVKDKGLRCQYIVACEPQGTPVSERAVPVAIFETDAEIMKFYLRKWCKTSS--DVGIR 1092
            + MVKDKGL C+Y++A  P   P++ERAVPV IF +D EI K +LR+W   +S  +   R
Sbjct: 658  EEMVKDKGLACKYVIANRPLNAPITERAVPVTIFSSDTEIKKRFLRRWLGDNSLDNFDPR 717

Query: 1093 SIVDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLYKKVREKEDKFRQRKLVD 1152
            +I+DW YY +RL+S +QKIITIPAA+Q +SNPVPR+ HP+WL KKV  + D  +Q  L  
Sbjct: 718  TIIDWEYYTERLASVVQKIITIPAALQNISNPVPRIAHPEWLQKKVNSQNDSKKQSSLAQ 777

Query: 1153 IFSSLKKDDFLNKTCNAETNLMDENVEDLEDFPKKRRNSVNGPRPIVRCFEVNNEQKTVK 1212
             F      D +    N          +D+EDF        NG             +K  K
Sbjct: 778  FFGKTTNSDIMKDISN--------RFKDIEDFGA----DTNGM-----------SRKMGK 814

Query: 1213 TTDQVDSLRQQLEPSEVSDQQPSSQNAIDTENIDRIVDYKGWLELKKRKWK-DNLDRRKK 1271
             T +    +Q+   S +++++   Q  ++ +  + +VDY  +L+ +K KWK  + +R ++
Sbjct: 815  VTSR--KRKQKELESRIAEKE---QKLLEEDCPNELVDYGSFLKYQKAKWKLQSQNRERR 869

Query: 1272 QKLGSLRASHQANGVSESLGDMINHKEAQRRTGVGSYFRRQETAMTRCHWQIIQLVPSS- 1330
            +KL    A+    G                   +G+  R++  +     WQ++Q    S 
Sbjct: 870  RKLFGASANTATRGT------------------IGNIMRKKAESYVGSSWQVLQYKHDST 911

Query: 1331 -QSGVFLAWVVVEGIMVRIPITVPRLFYLNSKD------PIVEKFPGRRVNKTLPHGRRS 1383
             + G   A V ++G +    I VP+  +L  K        I ++         LP G + 
Sbjct: 912  CKPGEVKALVFIDGRVQTFTIAVPKKVFLGLKTTDLGSLSIPDECTVEPSTNHLPKGEKV 971

Query: 1384 FNLIEVMIDEDQFRKESKKLAALLADPEVEVL 1415
             NL ++ + E++F  E      L    +V+ +
Sbjct: 972  ENLFKLTMSEEKFNAERGNCNGLFQHEDVKCV 1003



 Score =  230 bits (586), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 150/554 (27%), Positives = 281/554 (50%), Gaps = 45/554 (8%)

Query: 1448 ILWISDDGVPDLGGTSEEDECFAD---EVHQPVLTYPGAYRKVSVELKIHHLSVNALLKS 1504
            +LW S + +PD GG  E D+  A+    +  P +  P  Y  V +EL + +L++N +L S
Sbjct: 1259 VLWWSPNPLPDHGGF-ELDQSMANIEKSLEFPTINKPEIYETVCLELNLSNLTINTILTS 1317

Query: 1505 NQVNEMEGGGLFGFDQDMNSGPYNNELCGFDETTSSAPAFRVVKQLIQRCLTDAVTSGNV 1564
              +NE EG         +  G  N     F E   S PA + ++ L++    DA+   NV
Sbjct: 1318 ALINEAEG---------LEIGD-NENTTSFAEDIFSTPALQALRFLLKSWWDDAL-KNNV 1366

Query: 1565 FADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEFRKLGATIIFANFSKVI 1624
             AD ++ +   W+    S L+DP L   ++ + +K    LL EF++LG+TIIFAN +K++
Sbjct: 1367 DADIMVFNFMSWVEKTSSYLYDPSLLYHVYNLTKKSLLHLLGEFKRLGSTIIFANRNKIV 1426

Query: 1625 IDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLFMDQYNYGGIPARADES 1684
            + T K  +  + AY   ++K ++++ +F ++E + V +W  L++MDQYNYGG    A+ +
Sbjct: 1427 LKTSKLLVENSYAYGQYIIKTVRSKSMFSYLEFQVVRYWDMLIWMDQYNYGG-NGCAEIT 1485

Query: 1685 LDDDSQVDIVSSWNIAEYLP----KEIQDHFVLVVSEFM---YIPWKHAQKLAASRASL- 1736
             ++   +++++ W + ++LP    +E +D  V+++  F+    +    +Q     R +  
Sbjct: 1486 SNEKQDLELINHWQLQQFLPPVLQQEFEDWVVVILDSFLKCKQLDLNGSQSNGTPRQTQI 1545

Query: 1737 --------QEGSSCTPSITVAAAENFESHIVQYVKGEISSYFTGKLLSIVRDAIHHMKKM 1788
                    Q+ S  T  +      N        ++  I +    +L +++  A+      
Sbjct: 1546 QHILKKQNQQQSLSTDFVYEKPENNIIDMFGNVLEKRIITLKERQLRTLLNPALKA---- 1601

Query: 1789 NNDQHNSPGVMQTAANIHKVDAPLEFIKHVCAAFALDQNVQHDVLVMRKNLLKYVRVREF 1848
               ++  P +  +  ++   D  LEF+K +C   +L ++   +V V+R+N+LK   V+EF
Sbjct: 1602 ---EYEFPKLAGSQLDLS--DPTLEFVKFLCHILSLSKSRNIEVRVLRRNILKLFDVKEF 1656

Query: 1849 APEAEFRDPCPSFILPNVICSYCNDCRDLDLCRDMALLAQDWHCAMPQCGQPYDREVMEN 1908
            + EA F++P  S  L NV C  CN   DLDLCRD     + ++C    C + +++  +E 
Sbjct: 1657 SAEATFKNPSASLRLYNVHCEICNHITDLDLCRDTE--TEIFNCQ--NCKRRFNKLALEE 1712

Query: 1909 ALLQIVRQRERLYHLQDLVCIRCNQVKAAHLAEQCACAGSFRCKEDASDFRSKMQIFLNI 1968
             L+    +    ++ QDL C +C++++++ L   C+C+GS+    +  D   +M+ F  +
Sbjct: 1713 RLIADAHKLLVHFYNQDLKCSKCHKLRSSELQLYCSCSGSWIGTVNRGDIVKRMKTFHTV 1772

Query: 1969 ANRQGFQLLQECTS 1982
            A    F +L+E T+
Sbjct: 1773 ARFYDFNMLKEVTT 1786


>gi|149063731|gb|EDM14054.1| polymerase (DNA directed), epsilon (mapped) [Rattus norvegicus]
          Length = 1515

 Score = 1018 bits (2631), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 522/1004 (51%), Positives = 693/1004 (69%), Gaps = 51/1004 (5%)

Query: 426  MASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANV 485
            +A+YSVSDAVATYYLYM YVHPFIF+L TIIPM PDEVLRKGSGTLCE LLMVQA+ AN+
Sbjct: 23   LATYSVSDAVATYYLYMKYVHPFIFALCTIIPMEPDEVLRKGSGTLCEALLMVQAFHANI 82

Query: 486  ICPNKHQSDPEKFYRN-HLLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQLLNNL 544
            I PNK + +  K   + H+L++ETY+GGHVE LESGVFRSD+P  F+++P+A++ LL  +
Sbjct: 83   IFPNKQEQEFNKLTDDGHVLDAETYVGGHVEALESGVFRSDIPCRFRMNPAAFDFLLQRV 142

Query: 545  DRDLQYAIKVEGKMDLESVSNYDEVKNAIMEKLLRLQEEPIREECPLIYHLDVAAMYPNI 604
            ++ +++AI+ E K+ +E  +N+ EV   I  KL  L++ P R ECPLIYHLDV AMYPNI
Sbjct: 143  EKTMRHAIEEEEKVPVEQATNFQEVCEQIKTKLTSLKDVPNRIECPLIYHLDVGAMYPNI 202

Query: 605  ILTNRLQPPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYYHLKKQIESE- 663
            ILTNRLQP +IV +  C ACDFN+PG TC RK+ W WRGE     RS+Y+ ++ Q+ESE 
Sbjct: 203  ILTNRLQPSAIVDEATCAACDFNKPGATCQRKMAWQWRGEFMPASRSEYHRIQHQLESEK 262

Query: 664  ----FVDGTNGHLSKSFLDLPKMEQQSRLKDRLKKYCQKAYKRVLDKPVTELREAGICMR 719
                F +G     +++F +L + EQ    K RL  YC+KAYK++    V E R   IC R
Sbjct: 263  FPPLFPEGP----ARAFHELSREEQAKYEKRRLADYCRKAYKKIHMTKVEE-RLTTICQR 317

Query: 720  ENSFYVDTVRSFRDRRYEYKGLNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHK 779
            ENSFYVDTVR+FRDRRYE+KGL+KVWK KLS A   G++ +++  ++M +LYDSLQLAHK
Sbjct: 318  ENSFYVDTVRAFRDRRYEFKGLHKVWKKKLSAAVEVGDASEVKRCKNMEILYDSLQLAHK 377

Query: 780  CILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLP 839
            CILNSFYGYVMRKGARWYSMEMAG+V +TGA II  AR LIE+IG+PLELDTDGIWCVLP
Sbjct: 378  CILNSFYGYVMRKGARWYSMEMAGIVCFTGANIITQARELIEQIGRPLELDTDGIWCVLP 437

Query: 840  GSFPENFTFKTKDLKK-KLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSI 898
             SFPENF  KT ++KK KLTISYP  MLN+ V    TN QYQ L +P S TY T SE SI
Sbjct: 438  NSFPENFVIKTTNVKKPKLTISYPGAMLNIMVKEGFTNHQYQELTEPSSLTYVTRSENSI 497

Query: 899  EFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAEL 958
             FEVDGPY AMILPASKEEG  +KKRYAVFN+DG+LAELKGFE+KRRGEL+LIK+FQ+ +
Sbjct: 498  FFEVDGPYLAMILPASKEEGKKLKKRYAVFNEDGSLAELKGFEVKRRGELQLIKIFQSSV 557

Query: 959  FDKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLADYGEQ 1018
            F+ FL GST+EE Y++VA VA+ WLD+L ++  ++ DSEL + ISE+ +MS+ L DYGEQ
Sbjct: 558  FEAFLKGSTLEEVYASVAKVADYWLDVLYSKAANMPDSELFELISENRSMSRKLEDYGEQ 617

Query: 1019 KSCAVTTARRLSDFLGDTMVKDKGLRCQYIVACEPQGTPVSERAVPVAIFETDAEIMKFY 1078
            KS +++TA+RL++FLGD MVKD GL C+YI++ +P+G+PV+ERA+P+AIF+ +  + K +
Sbjct: 618  KSTSISTAKRLAEFLGDQMVKDAGLSCRYIISRKPEGSPVTERAIPLAIFQAEPTVRKHF 677

Query: 1079 LRKWCKTSS--DVGIRSIVDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLYK 1136
            LRKW K+SS  D  IR+I+DW YY +RL SAIQKIITIPAA+Q+V NPVPRV HPDWL+K
Sbjct: 678  LRKWLKSSSLQDFDIRTILDWDYYIERLGSAIQKIITIPAALQQVKNPVPRVKHPDWLHK 737

Query: 1137 KVREKEDKFRQRKLVDIFSSLKKDDFLNKTCNAETNLMDENVEDLEDF--PKKRRNSVNG 1194
            K+ EK D ++Q+K+ ++F    K   +     A  N +     D+EDF   K   ++V  
Sbjct: 738  KLLEKNDIYKQKKISELFVLEGKRQIV--MAQASENSLSLCTPDMEDFGLTKPYHSTVPV 795

Query: 1195 PRPIVRCFEVNNEQKTVKTTDQVDSLRQQLEPSEVSDQQPSSQNAIDTENIDRIVDYKGW 1254
                 R +E   E + +  T         +   EV  Q PS    + T   + +V    W
Sbjct: 796  ATKRKRVWESQKESQDITLT---------VPWQEVLGQPPS----LGTTQEEWLV----W 838

Query: 1255 LELKKRKW----KDNLDRRKKQKLGSLRASHQANGVSESLGDMINHKEAQRRTGVGSYFR 1310
            L+  K+KW    +  L RRKKQ+L S     +   + E              TG+GS+ R
Sbjct: 839  LQFHKKKWQLQAQQRLARRKKQRLESAEDMPRLGAIREGPA-----------TGLGSFLR 887

Query: 1311 RQETAMTRCHWQIIQLVPSSQSGVFLAWVVVEGIMVRIPITVPRLFYLNSKDPIVEKFPG 1370
            R   ++    WQIIQ+  + Q+G+F  W ++   +  I +++PR+FY+N +    E  P 
Sbjct: 888  RTARSIMDLPWQIIQISETRQAGLFRLWAIIGSDLHCIKLSIPRVFYVNQRVAKAEDGPS 947

Query: 1371 -RRVNKTLPHGRRSFNLIEVMIDEDQFRKESKKLAALLADPEVE 1413
             R+VN+ LP     +NL E  + ED +++   ++   L+ P++E
Sbjct: 948  YRKVNRALPRSNIVYNLYEYSVPEDMYQEHINEINTELSAPDIE 991



 Score =  156 bits (395), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 84/222 (37%), Positives = 129/222 (58%), Gaps = 13/222 (5%)

Query: 1442 LARYAHILWISDDGVPDLGGTSEEDECFA---DEVHQPVLTYPGAYRKVSVELKIHHLSV 1498
            L R+ H+LW+S    PDLGG   +D       D+     +   G Y  V VEL I +L+V
Sbjct: 1244 LQRHNHLLWLSPTSRPDLGGKEADDNRLVMEFDDRATVEINNSGCYSTVCVELDIQNLAV 1303

Query: 1499 NALLKSNQVNEMEGGGLFG--FD-------QDMNSG-PYNNELCGFDETTSSAPAFRVVK 1548
            N +L+S+ VN+MEG G  G  FD       +DM +G    + L  +DET   +  FR++K
Sbjct: 1304 NTILQSHHVNDMEGAGSMGISFDVIQQASLEDMVTGNQAASALASYDETALCSSTFRILK 1363

Query: 1549 QLIQRCLTDAVTSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEF 1608
             ++   + +     N++AD  + H YRWL SP S LHDP LHR LH +M+K+F  L+AEF
Sbjct: 1364 SMVVGWVKEITQYHNIYADNQVMHFYRWLQSPCSLLHDPALHRTLHNMMKKLFLQLIAEF 1423

Query: 1609 RKLGATIIFANFSKVIIDTGKFDLSAAKAYCDSLLKALQTRE 1650
            ++LG+++I+ANF+++I+ T K  +  A AY + +  +   R+
Sbjct: 1424 KRLGSSVIYANFNRIILCTKKRRIEDALAYVEYITNSKTPRQ 1465


>gi|119575217|gb|EAW54830.1| polymerase (DNA directed), epsilon, isoform CRA_a [Homo sapiens]
 gi|119575220|gb|EAW54833.1| polymerase (DNA directed), epsilon, isoform CRA_a [Homo sapiens]
          Length = 1816

 Score =  992 bits (2565), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 511/990 (51%), Positives = 684/990 (69%), Gaps = 54/990 (5%)

Query: 442  MTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVICPNKHQSDPEKFYRN 501
            M YVHPFIF+L TIIPM PDEVLRKGSGTLCE LLMVQA+ AN+I PNK + +  K   +
Sbjct: 1    MKYVHPFIFALCTIIPMEPDEVLRKGSGTLCEALLMVQAFHANIIFPNKQEQEFNKLTDD 60

Query: 502  -HLLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQLLNNLDRDLQYAIKVEGKMDL 560
             H+L+SETY+GGHVE LESGVFRSD+P  F+++P+A++ LL  +++ L++A++ E K+ +
Sbjct: 61   GHVLDSETYVGGHVEALESGVFRSDIPCRFRMNPAAFDFLLQRVEKTLRHALEEEEKVPV 120

Query: 561  ESVSNYDEVKNAIMEKLLRLQEEPIREECPLIYHLDVAAMYPNIILTNRLQPPSIVTDEV 620
            E V+N++EV + I  KL  L++ P R ECPLIYHLDV AMYPNIILTNRLQP ++V +  
Sbjct: 121  EQVTNFEEVCDEIKSKLASLKDVPSRIECPLIYHLDVGAMYPNIILTNRLQPSAMVDEAT 180

Query: 621  CTACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYYHLKKQIESE-----FVDGTNGHLSKS 675
            C ACDFN+PG  C RK+ W WRGE     RS+Y+ ++ Q+ESE     F +G     +++
Sbjct: 181  CAACDFNKPGANCQRKMAWQWRGEFMPASRSEYHRIQHQLESEKFPPLFPEGP----ARA 236

Query: 676  FLDLPKMEQQSRLKDRLKKYCQKAYKRVLDKPVTELREAGICMRENSFYVDTVRSFRDRR 735
            F +L + EQ    K RL  YC+KAYK++    V E R   IC RENSFYVDTVR+FRDRR
Sbjct: 237  FHELSREEQAKYEKRRLADYCRKAYKKIHITKVEE-RLTTICQRENSFYVDTVRAFRDRR 295

Query: 736  YEYKGLNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHKCILNSFYGYVMRKGAR 795
            YE+KGL+KVWK KLS A   G++ +++  ++M VLYDSLQLAHKCILNSFYGYVMRKGAR
Sbjct: 296  YEFKGLHKVWKKKLSAAVEVGDAAEVKRCKNMEVLYDSLQLAHKCILNSFYGYVMRKGAR 355

Query: 796  WYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLPGSFPENFTFKTKDLKK 855
            WYSMEMAG+V +TGA II  AR LIE+IG+PLELDTDGIWCVLP SFPENF FKT ++KK
Sbjct: 356  WYSMEMAGIVCFTGANIITQARELIEQIGRPLELDTDGIWCVLPNSFPENFVFKTTNVKK 415

Query: 856  -KLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEFEVDGPYKAMILPAS 914
             K+TISYP  MLN+ V    TNDQYQ L +P S TY T SE SI FEVDGPY AMILPAS
Sbjct: 416  PKVTISYPGAMLNIMVKEGFTNDQYQELAEPSSLTYVTRSENSIFFEVDGPYLAMILPAS 475

Query: 915  KEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFLHGSTIEECYSA 974
            KEEG  +KKRYAVFN+DG+LAELKGFE+KRRGEL+LIK+FQ+ +F+ FL GST+EE Y +
Sbjct: 476  KEEGKKLKKRYAVFNEDGSLAELKGFEVKRRGELQLIKIFQSSVFEAFLKGSTLEEVYGS 535

Query: 975  VAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLADYGEQKSCAVTTARRLSDFLG 1034
            VA VA+ WLD+L ++  ++ DSEL + ISE+ +MS+ L DYGEQKS +++TA+RL++FLG
Sbjct: 536  VAKVADYWLDVLYSKAANMPDSELFELISENRSMSRKLEDYGEQKSTSISTAKRLAEFLG 595

Query: 1035 DTMVKDKGLRCQYIVACEPQGTPVSERAVPVAIFETDAEIMKFYLRKWCKTSS--DVGIR 1092
            D MVKD GL C+YI++ +P+G+PV+ERA+P+AIF+ +  + K +LRKW K+SS  D  IR
Sbjct: 596  DQMVKDAGLSCRYIISRKPEGSPVTERAIPLAIFQAEPTVRKHFLRKWLKSSSLQDFDIR 655

Query: 1093 SIVDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLYKKVREKEDKFRQRKLVD 1152
            +I+DW YY +RL SAIQKIITIPAA+Q+V NPVPRV HPDWL+KK+ EK D ++Q+K+ +
Sbjct: 656  AILDWDYYIERLGSAIQKIITIPAALQQVKNPVPRVKHPDWLHKKLLEKNDVYKQKKISE 715

Query: 1153 IFSSLKKDDFLNKTCNAETNLMDENVEDLEDFPKKRRNSVNGPRPIVRCFEVNNEQKTVK 1212
            +F+   +         A  +    +  D+EDF       V  P P      V  ++K V 
Sbjct: 716  LFTLEGRRQV--TMAEASEDSPRPSAPDMEDF-----GLVKLPHPAA---PVTVKRKRVL 765

Query: 1213 TTDQVDSLRQQLEPS----EVSDQQPSSQNAIDTENIDRIVDYKGWLELKKRKW----KD 1264
               Q +S  Q L P+    E+  Q P    A+ T   + +V    WL   K+KW    + 
Sbjct: 766  WESQEES--QDLTPTVPWQEILGQPP----ALGTSQEEWLV----WLRFHKKKWQLQARQ 815

Query: 1265 NLDRRKKQKLGSLRASHQANGVSESLGDMINHKEAQRRTGVGSYFRRQETAMTRCHWQII 1324
             L RRK+Q+L S     +   + +              TG+GS+ RR   ++    WQI+
Sbjct: 816  RLARRKRQRLESAEGVLRPGAIRDGPA-----------TGLGSFLRRTARSILDLPWQIV 864

Query: 1325 QLVPSSQSGVFLAWVVVEGIMVRIPITVPRLFYLNSKDPIVEKFPG-RRVNKTLPHGRRS 1383
            Q+  +SQ+G+F  W +V   +  I +++PR+FY+N +    E+    R+VN+ LP     
Sbjct: 865  QISETSQAGLFRLWALVGSDLHCIRLSIPRVFYVNQRVAKAEEGASYRKVNRVLPRSNMV 924

Query: 1384 FNLIEVMIDEDQFRKESKKLAALLADPEVE 1413
            +NL E  + ED +++   ++ A L+ P++E
Sbjct: 925  YNLYEYSVPEDMYQEHINEINAELSAPDIE 954



 Score =  317 bits (811), Expect = 6e-83,   Method: Compositional matrix adjust.
 Identities = 192/609 (31%), Positives = 305/609 (50%), Gaps = 70/609 (11%)

Query: 1442 LARYAHILWISDDGVPDLGGTSEEDECFADEVHQPV---LTYPGAYRKVSVELKIHHLSV 1498
            L R+ H+LW+S    PDLGG   +D C   E        +   G Y  V VEL + +L+V
Sbjct: 1207 LQRHNHLLWLSPTARPDLGGKEADDNCLVMEFDDQATVEINSSGCYSTVCVELDLQNLAV 1266

Query: 1499 NALLKSNQVNEMEGGGLFGFDQD----------MNSGPYNNELCGFDETTSSAPAFRVVK 1548
            N +L+S+ VN+MEG    G   D          +  G   +    +DET   +  FR++K
Sbjct: 1267 NTILQSHHVNDMEGADSMGISFDVIQQASLEDMITGGQAASAPASYDETALCSNTFRILK 1326

Query: 1549 QLIQRCLTDAVTSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEF 1608
             ++   + +     N++AD  + H YRWL SP S LHDP LHR LH +M+K+F  L+AEF
Sbjct: 1327 SMVVGWVKEITQYHNIYADNQVMHFYRWLRSPSSLLHDPALHRTLHNMMKKLFLQLIAEF 1386

Query: 1609 RKLGATIIFANFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLF 1668
            ++LG+++I+ANF+++I+ T K  +  A AY + +  ++ ++E F  + +     W  LL+
Sbjct: 1387 KRLGSSVIYANFNRIILCTKKRRVEDAIAYVEYITSSIHSKETFHSLTISFSRCWEFLLW 1446

Query: 1669 MDQYNYGGIPARADESLD---DDSQV-------------------------------DIV 1694
            MD  NYGGI  +    +     DSQ                                D++
Sbjct: 1447 MDPSNYGGIKGKVSSRIHCGLQDSQKAGGAEDEQENEDDEEERDGEEEEEAEESNVEDLL 1506

Query: 1695 -SSWNIAEYLPK--EIQDHFVLVVSEFMYIPWKHAQKLAASRASLQEGSSCTPSITVAAA 1751
             ++WNI ++LP+    Q++F+++VS ++   + H  K    R++   GS+       +  
Sbjct: 1507 ENNWNILQFLPQAASCQNYFLMIVSAYIVAVY-HCMKDGLRRSA--PGSTPVRRRGASQL 1563

Query: 1752 ENFESHIVQYVKGEIS---SYFTGKLLSIVRDAIHHMKKMNNDQHNSPGVMQT-----AA 1803
                   V  + G I+    Y   +L          ++K      NS  + +       +
Sbjct: 1564 SQEAEGAVGALPGMITFSQDYVANELTQSFFTITQKIQKKVTGSRNSTELSEMFPVLPGS 1623

Query: 1804 NIHKVDAPLEFIKHVCAAFALDQNVQHDVLVMRKNLLKYVRVREFAPEAEFRDPCPSFIL 1863
            ++   +  LEFIK+VC   +LD N+ + V  + ++LL+ V V EF+ EA+FRDPC S++L
Sbjct: 1624 HLLLNNPALEFIKYVCKVLSLDTNITNQVNKLNRDLLRLVDVGEFSEEAQFRDPCRSYVL 1683

Query: 1864 PNVICSYCNDCRDLDLCRDM------ALLAQDWHCAMPQCGQPYDREVMENALLQIVRQR 1917
            P VIC  CN CRDLDLC+D       A+L Q W C+   C  PYD   +E  L+++++++
Sbjct: 1684 PEVICRSCNFCRDLDLCKDSSFSEDGAVLPQ-WLCS--NCQAPYDSSAIEMTLVEVLQKK 1740

Query: 1918 ERLYHLQDLVCIRCNQVKAAHLAEQCACAGSFRCKEDASDFRSKMQIFLNIANRQGFQLL 1977
               + LQDLVC++C  VK   +   C+CAG F        F  ++ IF NIA   G   L
Sbjct: 1741 LMAFTLQDLVCLKCRGVKETSMPVYCSCAGDFALTIHTQVFMEQIGIFRNIAQHYGMSYL 1800

Query: 1978 QECTSWILE 1986
             E   W+L+
Sbjct: 1801 LETLEWLLQ 1809


>gi|149238682|ref|XP_001525217.1| hypothetical protein LELG_03145 [Lodderomyces elongisporus NRRL
           YB-4239]
 gi|146450710|gb|EDK44966.1| hypothetical protein LELG_03145 [Lodderomyces elongisporus NRRL
           YB-4239]
          Length = 981

 Score =  989 bits (2557), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 487/920 (52%), Positives = 648/920 (70%), Gaps = 16/920 (1%)

Query: 16  KQKLIRSAEEELEAKLGYDLFSEGDK-----RLGWLLTFASSSLEDEDTRKVYSCIDLYF 70
           ++K + S  +++++ +G++ F  G+      R GWL+   ++++  ++    YS +D YF
Sbjct: 61  QKKELVSRIDQIDSLMGFERFEHGENDGNKPRKGWLINLHATTIPSDNYLTGYSGVDYYF 120

Query: 71  VSQDGSTFKSKYKFRPYFYA-ATKEKMEMDVEAYLRRRYES-QIADIEILEKEDLDLKNH 128
           + ++G +FK+  ++ PYF+          ++E ++RR  E+ ++   + + KEDL L NH
Sbjct: 121 LDEEGGSFKATLQYDPYFFVDILSADYASEIEEWMRRFLETCKVKSFDRVVKEDLSLPNH 180

Query: 129 LSGLHKSYLKISFDTVQQLMDVKKDLLHVVERNQAKFDAAEAYESILTGKREQRPQDFLD 188
           L GL KS +K++F  +Q L+  ++ L  +++ NQ   ++ + +   +    +    D L 
Sbjct: 181 LVGLKKSLIKLTFHNIQDLLMARRLLTPIIKENQMNKESRDMFNFNM----DIDASDPLK 236

Query: 189 CIVDLREYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLLEKRVDLLQRAEVHVCAFDIET 248
            + D++EYDVPYH+R AID  +R G+WY+V          +  +L+  A+  V AFDIET
Sbjct: 237 LLSDIKEYDVPYHVRVAIDKQIRVGKWYNVFAKHGKVEFVEDKELIAFADPVVLAFDIET 296

Query: 249 TKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNVN 308
           TK PLKFPDA  D +MMISYM+DG+G+LI NRE + EDI D EYTPKPE+ G F + N  
Sbjct: 297 TKAPLKFPDAKIDQVMMISYMIDGEGFLITNREIISEDIADFEYTPKPEYPGLFTIFNEP 356

Query: 309 NEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDKNQGEC 368
           +E  +L  +F H+++V+P +  T+NGD+FDWPF+E R+  H   M +E+GF  D N+GE 
Sbjct: 357 DEKHVLLRFFEHIRDVRPTVIATFNGDFFDWPFVENRSRFHDIDMFDEIGFAKD-NEGEY 415

Query: 369 RAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQMMAS 428
           ++K+  H+DCF WVKRDSYLPQGSQGLKAVT AKLGY+P E++PE M  +A EKPQ++A 
Sbjct: 416 KSKYCVHMDCFRWVKRDSYLPQGSQGLKAVTTAKLGYNPTELDPELMTPYAYEKPQLLAE 475

Query: 429 YSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVICP 488
           YSVSDAVATYYLY  YVHPFIFSL TIIP++PDEVLRKG+GTLCEMLL VQAY+ N++ P
Sbjct: 476 YSVSDAVATYYLYYKYVHPFIFSLCTIIPLNPDEVLRKGTGTLCEMLLSVQAYEGNILLP 535

Query: 489 NKHQSDPEKFYRNHLLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQLLNNLDRDL 548
           NKH    E+FY  HLLESETY+GGHVE LE+GVFRSD+PT FK+DP+A ++LL NL + +
Sbjct: 536 NKHSDPIERFYDGHLLESETYVGGHVESLEAGVFRSDIPTHFKIDPNAIDELLGNLHKSI 595

Query: 549 QYAIKVEGKMDLESVSNYDEVKNAIMEKLLRLQEEPIREECPLIYHLDVAAMYPNIILTN 608
           ++ I+VE    +E V N+DEV + I   L  L++ P R E PLIYH+DVA+MYPNI+ +N
Sbjct: 596 KFCIEVENNKKMEEVENFDEVYSQIEAALTELKQNPARNEKPLIYHVDVASMYPNIMTSN 655

Query: 609 RLQPPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYYHLKKQIESEFVDGT 668
           RLQP S+ ++E C ACDFNRPGK C R+L W WRGE +  + ++Y  +K+ +++E     
Sbjct: 656 RLQPDSMKSEEDCAACDFNRPGKNCDRRLPWSWRGEYYPAEMNEYNMIKRTLQNEEFPPQ 715

Query: 669 NGHL-SKSFLDLPKMEQQSRLKDRLKKYCQKAYKRVLDKPVTELREAGICMRENSFYVDT 727
              L  ++F +L   EQ S +K R+  Y +K Y RV    V   REA IC REN FYVDT
Sbjct: 716 KPWLPPRTFDELSYAEQASAIKKRISDYSRKVYHRVKQSKVV-TREAIICQRENPFYVDT 774

Query: 728 VRSFRDRRYEYKGLNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHKCILNSFYG 787
           VRSFRDRRYE+KGL KVWKGK ++   S N+I   EA  MVVLYDSLQLAHK ILNSFYG
Sbjct: 775 VRSFRDRRYEFKGLAKVWKGKANKISKS-NTIARDEANKMVVLYDSLQLAHKVILNSFYG 833

Query: 788 YVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLPGSFPENFT 847
           YVMRKG+RWYSMEMAG+   TGA IIQ AR L+E+IG+PLELDTDGIWC+LP SFPENF+
Sbjct: 834 YVMRKGSRWYSMEMAGITCLTGATIIQMARKLVERIGRPLELDTDGIWCILPQSFPENFS 893

Query: 848 FKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEFEVDGPYK 907
            K KD  KK+ + YPC MLN  V ++ TNDQYQTLVDP +  YET S+ SI FEVDGPYK
Sbjct: 894 LKCKD-GKKILLEYPCSMLNYLVHKDFTNDQYQTLVDPETFKYETRSDNSIFFEVDGPYK 952

Query: 908 AMILPASKEEGILIKKRYAV 927
           AMILP SKEEG  +KKRYAV
Sbjct: 953 AMILPTSKEEGKGLKKRYAV 972


>gi|66359706|ref|XP_627031.1| DNA polymerase epsilon catalytic subunit [Cryptosporidium parvum Iowa
            II]
 gi|46228472|gb|EAK89342.1| DNA polymerase epsilon catalytic subunit [Cryptosporidium parvum Iowa
            II]
          Length = 2728

 Score =  941 bits (2433), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 520/1177 (44%), Positives = 715/1177 (60%), Gaps = 99/1177 (8%)

Query: 52   SSLEDEDTRKVYSCIDLYFVSQDGSTFKSKYKFRPYFYAATKEKMEMD-VEAYLRRRYES 110
            SS E  ++ K  SC++LYF+++ G TFKS + FRPYFY   ++ +++  +   L  +Y  
Sbjct: 83   SSSELIESYKERSCLNLYFINKQGMTFKSPFFFRPYFYLEAQKAVDIHWILTNLEHKYRD 142

Query: 111  QIADIEILEKEDLDLKNHLSGLHKSYLKISFDTVQQLMDVKKDLLHVVERNQAKFDAAEA 170
               +   + KEDL L NHL G  +  +K SFD V++L+ ++ ++L  ++RN+ +    E+
Sbjct: 143  TTIEFTNIMKEDLTLDNHLIGEKREVIKASFDNVKELVSIRNEILDHIKRNKLEKKKNES 202

Query: 171  ----YESILTGKREQRPQDFLDCIVDLREYDVPYHIRFAIDNDVRCGQWYDVSISSTGPL 226
                Y+       E +  D LD I ++ EYDV Y  R  IDN +  G WYD S+  T  L
Sbjct: 203  LSAYYDQDQQNNYENKTLDVLDSISEIYEYDVQYEARVMIDNSISIGMWYD-SVRWTHEL 261

Query: 227  LE-KRVDLLQRA-EVHVCAFDIETTKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVG 284
            LE K +D    A ++   A+DIETTK PLKFP+ + D IMMIS M +GQGYLI NRE V 
Sbjct: 262  LELKCLDHDTSAPDLRSLAWDIETTKDPLKFPNVEKDQIMMISCMFEGQGYLITNREIVS 321

Query: 285  EDIEDLEYTPKPEFEGYFKVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLET 344
             DI D EY+PK E+E +FK  N  +E EL+  +   +Q ++P I  +YNGD FD+PFL  
Sbjct: 322  ADIYDFEYSPKKEYESFFKCINYPDEKELIWGFIKLIQTLRPHIIASYNGDNFDFPFLYE 381

Query: 345  RAAHHGFKMSEELGFQCDKN-------QGECRAKFA----CHLDCFAWVKRDSYLPQGSQ 393
            RA  +   +S+E G + + +       Q   +  F+     HLDCF WV+RDSYLP GS+
Sbjct: 382  RAKKYDIDVSKEWGIRMEIDHSSGGGLQSSNKTIFSGTNIIHLDCFRWVERDSYLPCGSR 441

Query: 394  GLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQMMASYSVSDAVATYYLYMTYVHPFIFSLA 453
            GLK+VTKAKL Y+P+E++PE MV +AK  PQ +A YSVSDAVATY+LY TYVH FIF+LA
Sbjct: 442  GLKSVTKAKLRYNPVELDPELMVPYAKTNPQGLAEYSVSDAVATYFLYKTYVHRFIFALA 501

Query: 454  TIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVICPNKHQSDPEKFYRNHLLESETYIGGH 513
            TIIP+S +++LRKGSGTLCE LLM +A+  N++ PNK   +  +FY+N  + + TY+GG 
Sbjct: 502  TIIPLSGEDLLRKGSGTLCEHLLMKEAFTKNILFPNKKVQETMEFYQNRPILNSTYVGGT 561

Query: 514  VECLESGVFRSDLPTSFKLDPSAYEQLLNNLDRDLQYAIKVEGKMDLESVSNYDEVKNAI 573
            VE L SGVFR+D+P  F L+    + L+  LD  L + IK  G   ++++ NY++V+N I
Sbjct: 562  VESLCSGVFRADIPEKFCLNTDTLKHLIKILDTTLNFGIKDSGTT-IDNIENYEQVRNEI 620

Query: 574  MEKLLRLQEEPIREECPLIYHLDVAAMYPNIILTNRLQPPSIVTDEVCTACDFNRPGKTC 633
            +EKL  L E P  +  PLIYHLDVAAMYPNIILTNRLQP +++ +  C  C FN   K C
Sbjct: 621  LEKLQSLLESPRIKIEPLIYHLDVAAMYPNIILTNRLQPTAVIEETTCMKCPFNSESKLC 680

Query: 634  LRKLEWVWRGEIFMGKRSDYYHLKKQIESEFVDGTNGHLS-----KSFLD---------- 678
             R++ W W+G++F   + +   +   I+ E  +     +      K F D          
Sbjct: 681  QRRMNWRWKGDVFPISKGEMERMINHIQIETFENVKNEIGAVNKKKKFEDHESDSENDDK 740

Query: 679  --------------------LPKMEQQSRLKDRLKKYCQKAYKRVLDKPVTELREAGICM 718
                                L   +Q   L  R+K YC K Y++  +  + E R + +C 
Sbjct: 741  MEFTGENVNINNKEKIKWSSLTPRQQSEILIQRMKAYCNKIYRKQTEN-IEETRSSIVCQ 799

Query: 719  RENSFYVDTVRSFRDRRYEYKGLNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAH 778
            REN FY+DTVR FRDRRY YKG  K  + KL  A+  G+ + +QEAQ+  +LY+SLQLAH
Sbjct: 800  RENPFYIDTVRRFRDRRYVYKGKKKEAEEKLKRAELLGDLLAVQEAQNEELLYESLQLAH 859

Query: 779  KCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVL 838
            KCILNSFYGYVMRKG+RW+SMEMA +VT+ G  +I+ AR L+E IG+PLELDTDGIW +L
Sbjct: 860  KCILNSFYGYVMRKGSRWFSMEMAAIVTWVGGNVIREARSLMEGIGRPLELDTDGIWAIL 919

Query: 839  PGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSI 898
            P  FPE  TF+ KD  KK  I Y C +LN  V ++ TNDQY      + K Y    E SI
Sbjct: 920  PKGFPEEITFRLKDGGKK-KIHYICTLLNQQVHKSWTNDQYLEYDADLGK-YNIKVENSI 977

Query: 899  EFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAEL 958
             FEVDGPYK   +PAS ++  L+KKRYAVF+ +  L ELKGFE+KRRGEL+LIK+ Q EL
Sbjct: 978  YFEVDGPYKCFFIPASDKQNKLLKKRYAVFDFENRLKELKGFELKRRGELQLIKILQEEL 1037

Query: 959  FDKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSE-LIDYISESSTMSKSLADYGE 1017
            F  FL G++ +E Y  VAA++ +WL L+D +G+ I D E L   ISES  MSKS+   G 
Sbjct: 1038 FPAFLKGNSKKEAYDHVAAISKKWLSLIDTKGRGILDDEQLFFLISESKNMSKSVQQMGN 1097

Query: 1018 QKSCAVTTARRLSDFLGD-TMVKDKGLRCQYIVACEPQGTPVSERAVPVAIFETDAEIMK 1076
             KS ++TTA+RL +FL + + ++DK + C++IV+  P+G   S+RAVP++IF T  E   
Sbjct: 1098 AKSMSITTAKRLFEFLQNPSYIQDKNIVCKFIVSEFPKGEDKSQRAVPLSIFSTPLETRV 1157

Query: 1077 FYLRKWCKTSSDVG---------------------------------------IRSIVDW 1097
             +L KW + S   G                                       +R+I+DW
Sbjct: 1158 SWLSKWLRISKSGGRREKDELVEHRRKADVDITSGSGGGSGILNKENENNKWNVRNILDW 1217

Query: 1098 SYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDWL 1134
             YYK RL++ I KI+ IPA  Q V NP+P +  P W+
Sbjct: 1218 EYYKNRLTNTILKIVIIPAINQGVPNPLPELEVPSWV 1254



 Score = 47.8 bits (112), Expect = 0.066,   Method: Compositional matrix adjust.
 Identities = 46/204 (22%), Positives = 83/204 (40%), Gaps = 35/204 (17%)

Query: 1796 PGVMQTAANIHKVDAPLEFIKHVCAAFALDQNVQHD---------VLVMRKNLLKYVRVR 1846
            P  +  A N +K    LE IK     + LD++   D         ++ M   + + V + 
Sbjct: 2498 PPCIGKAYNGNKPSLSLELIKLFIYIWGLDKSFSIDESKQKQYEQIIFM---VCQAVDIS 2554

Query: 1847 EFAP--EAEFRDPCPSFILPNVICSYCNDCRDLDLC-------RDMALLAQD-------- 1889
            EF P    ++  P   +I+ +  C  C +  D D          D+ L + +        
Sbjct: 2555 EFNPIVTEKWTSPLIPYIIKDFSCPNCFEIEDFDFTGNAIQDEDDLGLSSNNYNNIIRPR 2614

Query: 1890 --WHCAMPQCGQPYDREVMENALLQIVRQRERLYHLQDLVCIRCNQVKAAHLAEQC-ACA 1946
              W+C+   C    D E++E  LL    +R  +   QD++C RCN V+  ++ + C  C 
Sbjct: 2615 FTWYCS--HCNFSIDNEILEEKLLLEFFERLEVIQSQDILCSRCNSVQIGYMQKHCDECM 2672

Query: 1947 GSFRCK-EDASDFRSKMQIFLNIA 1969
            G    +  +   F +   +F ++A
Sbjct: 2673 GELTTRLGNHKTFHNFFTLFNSVA 2696


>gi|326438058|gb|EGD83628.1| DNA polymerase II [Salpingoeca sp. ATCC 50818]
          Length = 2107

 Score =  941 bits (2431), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 458/856 (53%), Positives = 598/856 (69%), Gaps = 32/856 (3%)

Query: 14  TKKQKLIR--SAEEELEAKLGYDLFSEGDKRLGWLLTFASSSLEDEDTRKVYSCIDLYFV 71
           +K  +L++   A++ ++A+ G+  F+ G  RLGWLL   S+   D +   V S +D YF+
Sbjct: 73  SKLDRLVKMAQADDRMDARFGFTKFTSGPTRLGWLLNMQSTVFRDSEGH-VRSAVDFYFM 131

Query: 72  SQDGSTFKSKYKFRPYFYAATKEKMEMDVEAYLRRRYESQIADIEILEKEDLDLKNHLSG 131
            +DG  FK  Y + PYF+   K    ++VE YLRR++++++A ++ ++KEDL L NHL G
Sbjct: 132 EEDGGRFKVAYPYLPYFFIKVKSNTAIEVEQYLRRKFDAKLASLDRIDKEDLSLPNHLVG 191

Query: 132 LHKSYLKISFDTVQQLMDVKKDLLHVVERNQ-----AKFDAAEAYESILTGKREQ----- 181
           L + YLK+SF  V  LM VK  L+  + +NQ     +++ +A    + +   R       
Sbjct: 192 LRQLYLKLSFLNVHDLMHVKSKLMPRIRKNQQQAKESRYSSAALDTAAIARTRRHGHDSD 251

Query: 182 ----------------RPQDFLDCIVDLREYDVPYHIRFAIDNDVRCGQWYDVSISSTGP 225
                              D LD IVD+REYDVPYH+R +IDN + CG+WYD +I+    
Sbjct: 252 DDDDDGGAQTDTNARVHSDDVLDNIVDIREYDVPYHMRVSIDNKIACGKWYDAAITGNQV 311

Query: 226 LLEKRVDLLQRAEVHVCAFDIETTKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGE 285
           L+ +R D L R +  V A+DIETTKLPLKFPD + D IMMISYM+DGQGYLIINRE V E
Sbjct: 312 LITERADKLLRPDPIVLAWDIETTKLPLKFPDMETDQIMMISYMIDGQGYLIINREIVSE 371

Query: 286 DIEDLEYTPKPEFEGYFKVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETR 345
           DIED EYTPKPEF G F V N  +E   +  +F H+++V+P I  TYNGD+FDWPFLE R
Sbjct: 372 DIEDFEYTPKPEFPGPFTVMNEQDEHATISRFFQHIRDVRPHIMATYNGDFFDWPFLERR 431

Query: 346 AAHHGFKMSEELGFQCDKNQGECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGY 405
           A   G  M +E+G++ D NQGE +A+FA H+DCF WVKRDSYLP GSQGLKAVT+AKL Y
Sbjct: 432 AEILGMNMFQEIGYRPD-NQGEYKARFAPHMDCFRWVKRDSYLPVGSQGLKAVTRAKLRY 490

Query: 406 DPLEVNPEDMVRFAKEKPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLR 465
           DPLE++ E++ R A E+PQ +A+YSVSDAVATYYLYM YV+PFIF+L TIIP+ PD+VLR
Sbjct: 491 DPLEIHYEEICRMAAEEPQQLANYSVSDAVATYYLYMKYVNPFIFALCTIIPLGPDDVLR 550

Query: 466 KGSGTLCEMLLMVQAYKANVICPNKHQSDPEKFYRNHLLESETYIGGHVECLESGVFRSD 525
           KGSGTLCE LLM  AY AN+I PNK Q++  K +   LL+SETYIGGHVE LESGVFRSD
Sbjct: 551 KGSGTLCESLLMFNAYHANIIMPNKKQAELNKLHGGRLLDSETYIGGHVEALESGVFRSD 610

Query: 526 LPTSFKLDPSAYEQLLNNLDRDLQYAIKVEGKMDLESVSNYDEVKNAIMEKLLRLQEEPI 585
           +P  F++ PSA + L++NLD  L+YAI+VE K D  +++NY+EVK  I+ +L  L++ P 
Sbjct: 611 IPCRFRIVPSAVQTLIDNLDNTLRYAIEVEEKRDFSTITNYEEVKAEIVRRLEDLRDNPY 670

Query: 586 REECPLIYHLDVAAMYPNIILTNRLQPPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEI 645
           R+E PLIYHLDVAAMYPNIILTNRLQPP++V + +C AC FN+PG  C RK+ W WRGE+
Sbjct: 671 RQEVPLIYHLDVAAMYPNIILTNRLQPPAMVDEAMCAACSFNKPGANCQRKMPWKWRGEV 730

Query: 646 FMGKRSDYYHLKKQIESEFVDGTN-GHLSKSFLDLPKMEQQSRLKDRLKKYCQKAYKRVL 704
               R++Y  +K Q+ESE   G N G   + F DL   +Q + +K RL  Y ++ YK+  
Sbjct: 731 SPASRNEYESIKAQLESEVFPGENEGDPPRPFHDLTPDDQAALIKKRLHAYARRVYKKTH 790

Query: 705 DKPVTELREAGICMRENSFYVDTVRSFRDRRYEYKGLNKVWKGKLSEAKASGNSIKIQEA 764
              V E R A +C REN FY++TVR+FRDRRY +KG  K  K    + + +G+ +KI+E 
Sbjct: 791 ITTV-EDRTATVCQRENPFYINTVRNFRDRRYVFKGKLKEAKKTFEKVQETGDPVKIKET 849

Query: 765 QDMVVLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIG 824
            ++VVLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAG+V  TGA II  AR ++E++G
Sbjct: 850 SNLVVLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGIVCLTGANIITRAREIVEQLG 909

Query: 825 KPLELDTDGIWCVLPG 840
           +PLELDTDGIWC LPG
Sbjct: 910 RPLELDTDGIWCCLPG 925



 Score =  172 bits (435), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 98/304 (32%), Positives = 154/304 (50%), Gaps = 41/304 (13%)

Query: 1414 VLGWQQNAAKIGMQRCAASSQWFNERISLARYAHI------------------------- 1448
             L WQ+ A    +  C    +WF   + +ARYAH+                         
Sbjct: 1412 ALNWQKQALHDMLAHCCMFPRWFAITLKVARYAHVPIGNLPADHHLFICDVFYARQLRKQ 1471

Query: 1449 ---LWISDDGVPDLGGTSEEDECFAD---EVHQPVLTYPGAYRKVSVELKIHHLSVNALL 1502
               LW S    PDLGG  E+D        E H  +   PG Y    V++ +  L + A+L
Sbjct: 1472 NFLLWASPSHRPDLGGKEEDDNRLMSDDSETHWEI-NNPGVYSTACVDITLSSLPMAAVL 1530

Query: 1503 KSNQVNEMEGGG--LFGFD-------QDMNSGPYNNELCGFDETTSSAPAFRVVKQLIQR 1553
             ++ ++E E G   +  FD       ++M       EL  FDE+    PAF+V++ ++  
Sbjct: 1531 YADDIHETENGASMIATFDSNPKSSLEEMVQEKTGFELTVFDESAQCMPAFKVLRLMLNT 1590

Query: 1554 CLTDAVTSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEFRKLGA 1613
             L + +  GN  AD  L H +RWL SP S L+DP + R++  +M+K+F  L++E RKLG+
Sbjct: 1591 WLKEVIRFGNTHADEQLVHFFRWLKSPDSLLYDPAMLRLVRGLMKKLFLRLISELRKLGS 1650

Query: 1614 TIIFANFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLFMDQYN 1673
             I+FANF++++I T K ++  A AY + +LK ++ +E+F  + L+P   W  L++MD  N
Sbjct: 1651 QIVFANFARLLIKTDKTNVEDATAYTNFILKVIREQEVFRIVYLQPTMVWDYLVWMDVNN 1710

Query: 1674 YGGI 1677
            YGGI
Sbjct: 1711 YGGI 1714



 Score =  156 bits (395), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 92/302 (30%), Positives = 152/302 (50%), Gaps = 13/302 (4%)

Query: 1690 QVDIVSSWNIAEYLPKEIQDHFVLVVSEFMYIPWKHAQKLAASRASLQEGSSCTPSITVA 1749
             V++ + WNIA +LPK  Q+ F  +V  ++ + +    K+ A R     G +     T  
Sbjct: 1808 HVNVETHWNIAAFLPKMCQEVFEEIVGRWILLCYN--AKVEARRRRGGMGLTPLKEQTTE 1865

Query: 1750 AAENFESHIVQYVKGEISSYFTGKLLSIVRDAIHHMKKMNNDQHNSPGVMQTAANIHKVD 1809
                 +    Q +K  +S     K ++ V   +    +      + P  M   +++    
Sbjct: 1866 EIALAKKQAYQQIKETLSEMLM-KAVAFVNQNLPGDARAQGQSADFP--MLPGSHLPLKH 1922

Query: 1810 APLEFIKHVCAAFALDQNVQHDVLVMRKNLLKYVRVREFAPEAEFRDPCPSFILPNVICS 1869
              LE  K +C    LD++   D+  +++NLL+ + VREF+ EA+F+DPC SF+L + +C+
Sbjct: 1923 PALELTKSICHVLMLDKSHASDMARLKRNLLQLISVREFSSEAKFKDPCLSFVLSDFVCT 1982

Query: 1870 YCNDCRDLDLCRDMALLAQD-----WHCAMPQCGQPYDREVMENALLQIVRQRERLYHLQ 1924
            +CN  RDLDLCRD  L   D     W C   +C   YDR V+E  L++ + Q   +Y LQ
Sbjct: 1983 FCNTYRDLDLCRDSTLSTNDDGTTVWKCH--ECDSEYDRGVIEQQLIEHINQIIMMYQLQ 2040

Query: 1925 DLVCIRCNQVKAAHLAEQCACAGSFRCKEDA-SDFRSKMQIFLNIANRQGFQLLQECTSW 1983
            D+ CI+C QVK  ++ + C C+G+F     A  + + ++     IA     +LL+E T+W
Sbjct: 2041 DVRCIKCKQVKDTNMHKFCECSGTFNTASTAPGELKQQLSTMQRIAQGHKLELLEEMTTW 2100

Query: 1984 IL 1985
             L
Sbjct: 2101 AL 2102



 Score = 79.0 bits (193), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 46/176 (26%), Positives = 86/176 (48%), Gaps = 16/176 (9%)

Query: 1250 DYKGWLELKKRKWK-DNLDRRKKQKLGSLRASHQANGVSESLGDMINH------------ 1296
            D+  WL  +K+KW+     R  ++++G    + +A G S    +  NH            
Sbjct: 1032 DFGAWLRYQKKKWRIQRTQRNLRKQMGVSADTVRAFGASSQTPE--NHHSSGGGSVGGGM 1089

Query: 1297 KEAQRRTGVGSYFRRQETAMTRCHWQIIQLVPSSQSGVFLAWVVVEGIMVRIPITVPRLF 1356
            +  +R   +  + R+++  +   HW+IIQ+  + + G+   W +V G +  + + VPR F
Sbjct: 1090 RMGKRLLNMAQFLRQKQGNLNSTHWEIIQIAETREPGIMKVWCMVAGDLHCMRMNVPRRF 1149

Query: 1357 YLNSKDPIVEKFPGRRVNKTLPHGRRSFNLIEVMIDEDQFRKESKKLAALLADPEV 1412
            Y+N + P        RVNK LP   + ++L E  + E +F +  + LAA L+ P++
Sbjct: 1150 YVNLRTPDTSG-TRERVNKILPRHHKCYHLYEFRMREREFLQRQRVLAAKLSHPDI 1204


>gi|209876836|ref|XP_002139860.1| DNA polymerase epsilon catalytic subunit [Cryptosporidium muris RN66]
 gi|209555466|gb|EEA05511.1| DNA polymerase epsilon catalytic subunit, putative [Cryptosporidium
            muris RN66]
          Length = 2514

 Score =  936 bits (2419), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 575/1489 (38%), Positives = 848/1489 (56%), Gaps = 185/1489 (12%)

Query: 63   YSCIDLYFVSQDGSTFKSKYKFRPYFYAATKEKMEMDVEAY-----LRRRYESQIADIEI 117
            ++C+ LYFV++ G TFKS + +RPYF+  T    +++ + +     L  +Y  +  + +I
Sbjct: 89   HACLYLYFVNKRGETFKSPFFYRPYFFLET----DLNTKKHWFINNLENKYRDEGLEADI 144

Query: 118  LEKEDLDLKNHLSGLHKSYLKISFDTVQQLMDVKKDLLHVVERNQAKFDAAEAYESILTG 177
            +EK+DL+L NHL G  K  +K+SF+ V+ L+ V+ ++L  ++ N+ K        ++   
Sbjct: 145  VEKDDLNLSNHLIGEKKELIKVSFNNVKNLVTVRNEILLFIKENKKKKSDNNPLSTV--- 201

Query: 178  KREQRPQDFLDCIVDLREYDVPYHIRFAIDNDVRCGQWYDV-SISSTGPLLEKRVDLLQR 236
                +  DF   I+++ EYD+ Y +R  IDN++  G WY+V   ++    L+       +
Sbjct: 202  ---AKLDDFSLNIIEIYEYDILYSVRVLIDNNISIGMWYEVIRWTNELLELKLLEKDTSQ 258

Query: 237  AEVHVCAFDIETTKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKP 296
             ++   A+DIETTK PLKFP+ + D IMMIS + +GQGYLI+NR  V  DI D EY+PKP
Sbjct: 259  PDLRCLAWDIETTKEPLKFPNVEIDEIMMISCVFEGQGYLIVNRNIVSSDISDFEYSPKP 318

Query: 297  EFEGYFKVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEE 356
            EF   F   N  NE  L+R +   +Q+++P +  +YNGD FD+PFL  R   +G  ++E+
Sbjct: 319  EFTAPFSCINCENEETLIRYYVKLVQKLRPHVISSYNGDNFDFPFLFERGLKYGLDLTEQ 378

Query: 357  LGF--QCDKNQGEC-----RAKF----ACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGY 405
             G   Q +++ G       +  F      HLDCF WV+RDSYLP GS+ LK+VTK KL Y
Sbjct: 379  WGIIRQVEQSGGSAIVGNSKTNFLGTNMLHLDCFRWVERDSYLPCGSRSLKSVTKDKLRY 438

Query: 406  DPLEVNPEDMVRFAKEKPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLR 465
            +P+E++PE MV +A+E P+++A YSVSDAVATYYLY TYVH FIF+LATIIP+  +E+LR
Sbjct: 439  NPVELDPELMVPYARENPEVLAEYSVSDAVATYYLYKTYVHRFIFALATIIPLPGEELLR 498

Query: 466  KGSGTLCEMLLMVQAYKANVICPNKHQSDPEKFYRNHLLESETYIGGHVECLESGVFRSD 525
            +G+GTLCE LLM +A+K N++ PNK  ++  +F+ N  + + TY+GG VE L SG+FRSD
Sbjct: 499  RGTGTLCEHLLMKEAFKKNILFPNKKINESMEFHENRPILNSTYVGGTVEALCSGIFRSD 558

Query: 526  LPTSFKLDPSAYEQLLNNLDRDLQYAIKVEGKMDLESVSNYDEVKNAIMEKLLRLQEEPI 585
            +P  F LD +  + L+ +LD  L++ I+   K  +E  +NY +VK+ I++ L   +E   
Sbjct: 559  IPELFCLDTATLDILIKDLDSTLKFGIEKANK-KVEDCTNYQDVKDEILQILTSFRENNK 617

Query: 586  REECPLIYHLDVAAMYPNIILTNRLQPPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEI 645
                PLIYHLD+AAMYPNIILTNRLQP +IV+D+ C  C F      C R + W W+G+I
Sbjct: 618  LSVNPLIYHLDIAAMYPNIILTNRLQPTAIVSDDQCRRCTFYSEANKCQRIMNWRWKGDI 677

Query: 646  FM-----------------------------GKRSDYYHLKKQIESEFVDGTN-GHLS-- 673
            F                               + SD  H   + +SE +D T  G+++  
Sbjct: 678  FPLSKGEMDRIIKYLKIESFDVNSYKVKYDDDQNSDSDHSNYEEKSENLDITTPGNMNSN 737

Query: 674  ---------KSFLDLPKMEQQSRLKDRLKKYCQKAYKRVLDKPVTELREAGICMRENSFY 724
                     +S+  L   +Q   L  RLKKYC K Y+R     + E R + +C RENSFY
Sbjct: 738  KVSNKSNGQRSWDSLTARQQSEILIQRLKKYCSKVYRRQ-TISIEETRSSIVCQRENSFY 796

Query: 725  VDTVRSFRDRRYEYKGLNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHKCILNS 784
            VDTVR FRDRRY YK   K  + KL +A+   + I I+ AQ+  +LY+SLQLAHKCILNS
Sbjct: 797  VDTVRCFRDRRYIYKDKKKDAEEKLRQAELKEDIIAIKSAQNEELLYESLQLAHKCILNS 856

Query: 785  FYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLPGSFPE 844
            FYGYVMR+G+RW+SMEMA +VT+ G  +I+ AR+L+E IGK LELDTDGIW +LP  FP+
Sbjct: 857  FYGYVMRRGSRWFSMEMAAIVTWLGGNVIREARVLVENIGKVLELDTDGIWAILPRGFPD 916

Query: 845  NFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEFEVDG 904
              TF+ KD  KK  I Y C +LN  V +N TNDQY    DP+SK Y    E SI FEVDG
Sbjct: 917  EITFRFKDESKK-KIHYVCTLLNHQVHKNWTNDQYLDF-DPISKKYIAKVENSIYFEVDG 974

Query: 905  PYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFLH 964
            PYK   +PAS ++  L+KKRYAV+  D  L ELKGFE+KRRGEL+LIK+ Q E+F  FLH
Sbjct: 975  PYKCFFIPASDKQDKLLKKRYAVYGFDNKLKELKGFELKRRGELQLIKILQEEIFPAFLH 1034

Query: 965  GSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDY-ISESSTMSKSLADYGEQKSCAV 1023
            GS+ EE Y +VA    RWL+L++ +G  I D E + Y ISE+  MSKS+   G  KS A+
Sbjct: 1035 GSSKEEAYESVAKTTLRWLNLIETRGSGILDDEQLFYLISETKNMSKSVEQMGSAKSMAI 1094

Query: 1024 TTARRLSDFLGD-TMVKDKGLRCQYIVACEPQGTPVSERAVPVAIFETDAEIMKFYLRKW 1082
            TTARRL  FL + + + DK + C++IV+  P+G   S+RA+P++IF    EI  ++L KW
Sbjct: 1095 TTARRLFQFLQNPSYLVDKNVACKFIVSEYPKGEDKSQRAIPLSIFSAPLEIRAYWLSKW 1154

Query: 1083 CKTS-------------------------------------------SDVGIRSIVDWSY 1099
             + +                                           S+  +R+I+DWSY
Sbjct: 1155 LRLTKVPIQNKEDNNELHDHESKEQLKGNISNNSEEITMIGNKKLKESNWDVRNILDWSY 1214

Query: 1100 YKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLYKKVREKEDKFRQRKLVDIFSSLKK 1159
            YK+RL + I KI+ IPA  Q V+NP+P +  P W+  K + +     Q+K+   FS  K 
Sbjct: 1215 YKKRLINTILKIVIIPAIYQGVNNPLPSLPLPTWI--KNQAELSGPNQQKISQYFSIKKV 1272

Query: 1160 DDFLNKTCNAETNL---------MDENVEDL-----EDFPKKRRNSVNGPRPIVRCF--E 1203
            +   +++ + ETNL          ++N++++     E+   ++RNS +    + + F  E
Sbjct: 1273 N---SESISQETNLSKPQCQITTQEKNIDEVCINNNENSKIEKRNSNSDMLELEKEFGKE 1329

Query: 1204 VNNEQKTVKTTDQVDSLRQQLEPSEVSDQQPSSQNAIDTENIDRI-VDYKGWLELKKRKW 1262
            VN++           ++ Q+LE +  S++   +     +E    +  ++KGWL  + ++W
Sbjct: 1330 VNSK-----------NVIQELEKTSHSNKVLHTGTLSKSERSKLLQTNFKGWLSYQTKRW 1378

Query: 1263 KDNLDRRKKQ--KLGSLRASHQANGVS---ESLGDMINHKEAQRRTGVGSYFRRQETAMT 1317
                +  K+   K+     +   N  +   ++  + IN+KE      + SY     T +T
Sbjct: 1379 LLKYESLKQTQVKINKKLENKMVNTSTLQFKNKSNQINNKEV-----MSSY-----TFLT 1428

Query: 1318 RCHWQIIQLVPSSQS------GVFLAWVVVEGI--MVRIPITVPRLFYLNSKDPIV---- 1365
            + + QI+ + P + S      G +   +  E    M   P    R F + S  PI     
Sbjct: 1429 KGNLQILDIYPFNTSDGNKYHGHYNILLYSESYRKMYVAPFEFSRRFLVASSVPIKLAED 1488

Query: 1366 ---EKFPGRRVN--KTLPHGRRSFNLIEVMIDEDQFRKESKKLAALLAD 1409
               ++F  + +   K LP G     L+EV + E+ F  ESK  ++L+ D
Sbjct: 1489 TKDKQFSCKNITSEKELPRGVAYNYLMEVGMSENLF-IESK--SSLICD 1534



 Score = 75.1 bits (183), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 45/182 (24%), Positives = 89/182 (48%), Gaps = 12/182 (6%)

Query: 1552 QRCLTDAVTSGNVFADAIL---QHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEF 1608
            Q+     + + N+ ++ I+   +  YRWLCSP S + DP L R+      K F +L  E 
Sbjct: 1987 QKSEESIINTNNILSEFIINVQEQFYRWLCSPQSLMFDPALVRMTKSYSSKFFKILQDEL 2046

Query: 1609 RKLGATIIFANFSKVIIDTGKFDLS-AAKAYCDSLLKALQTRELFEWIELEPVHFWHSLL 1667
              +   I++ N  ++++ T    +   ++ Y   +++ L  + LF  + L P+  + +LL
Sbjct: 2047 SNIDIKIVYGNIRRIVLTTNLNRIEDESRQYFKQMMELLNNKPLFSGLSLVPIVEYKALL 2106

Query: 1668 FMDQYNYGGIPARADESLDDDSQVDIVSSWNIAEYLPKEIQDHFVLVVSEFMYIPWKHAQ 1727
             +D+ NY         +LD ++  DI  S  I  YLP   +   +  +S+F+ +P +  +
Sbjct: 2107 QIDKSNY------FRRTLDPENPYDIHLS--ILNYLPINTRQFILDEISDFLMLPIRKTR 2158

Query: 1728 KL 1729
            ++
Sbjct: 2159 EI 2160



 Score = 45.8 bits (107), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 38/129 (29%), Positives = 52/129 (40%), Gaps = 27/129 (20%)

Query: 1857 PCPSFILPNVICSYCNDCRDLDL-----------CRDMALLAQD--------WHCAMPQC 1897
            P  SFI+ ++IC  C    DLDL            RD+ L            W C    C
Sbjct: 2350 PFNSFIIKDLICPNCLGIDDLDLIGSLTLDEELGVRDLDLDGSTRKFISSLYWKCIY--C 2407

Query: 1898 GQPYDREVMENALLQIVRQRERLYHLQDLVCIRCNQVKAAHLAEQ-CA-CAGSFRCK--- 1952
              P D  ++E  L+    +R      QD+VC +C  VK   L+   C+ C G F  +   
Sbjct: 2408 NIPIDTHIIEERLIIEFYERLAAIQSQDVVCKQCKAVKVGKLSNSICSYCMGEFTTRLFN 2467

Query: 1953 -EDASDFRS 1960
             E+  DF S
Sbjct: 2468 LEEFKDFFS 2476


>gi|255958342|gb|ACU43538.1| MIP12077p [Drosophila melanogaster]
          Length = 909

 Score =  934 bits (2415), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 455/843 (53%), Positives = 604/843 (71%), Gaps = 21/843 (2%)

Query: 25  EELEAKLGYDLFSEGDKRLGWLLTFASSSLEDEDTRKVYSCIDLYFVSQDGSTFKSKYKF 84
           +++++K G+D   +  +R G+L+   S+ + DED R++ + +DL+F+  DGS FK    +
Sbjct: 61  DKIDSKYGFDRVKDSQERTGYLINMHSNEVLDED-RRLIAALDLFFIQMDGSRFKCTVAY 119

Query: 85  RPYFYAATKEKMEMDVEAYLRRRYESQIADIEILEKEDLDLKNHLSGLHKSYLKISFDTV 144
           +PY     ++ M ++V  +L R+Y  QI+ +E + KEDLDL NHLSGL + Y+K+SF   
Sbjct: 120 QPYLLIRPEDNMHLEVARFLGRKYSGQISGLEHITKEDLDLPNHLSGLQQQYIKLSFLNQ 179

Query: 145 QQLMDVKKDLLHVVERNQAKFDAAEAYESILTGKREQ------------RPQDFLDCIVD 192
             +  V+++L+  V+R+Q +  +   Y  +L     Q            R QD++DCIVD
Sbjct: 180 TAMTKVRRELMSAVKRDQERQKSNTYYMQMLATSLAQSSAGSEDATLGKRQQDYMDCIVD 239

Query: 193 LREYDVPYHIRFAIDNDVRCGQWYDVSISSTG--PLLEKRVDLLQRAEVHVCAFDIETTK 250
           +RE+DVPYH+R +ID  + CGQWY++   S    P +  R D+L R E  V AFDIETTK
Sbjct: 240 IREHDVPYHVRVSIDLRIFCGQWYNIRCRSGVELPTITCRPDILDRPEPVVLAFDIETTK 299

Query: 251 LPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNVNNE 310
           LPLKFPDA  D +MMISYM+DGQGYLI NRE +  +++D EYTPKPEFEG F V N  NE
Sbjct: 300 LPLKFPDAQADQVMMISYMIDGQGYLITNREIISSNVDDFEYTPKPEFEGNFIVFNEENE 359

Query: 311 IELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDKNQGECRA 370
           ++LL+ +F H+ EV+P I VTYNGD+FDWPF+ETRAA +   M +E+GF   ++ G   +
Sbjct: 360 MQLLQRFFDHIMEVRPHIIVTYNGDFFDWPFVETRAAVYDLDMKQEIGFSKLRD-GNYLS 418

Query: 371 KFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQMMASYS 430
           + A H+DC  WVKRDSYLP GSQGLKAV KAKL YDP+E++PEDM R A E+PQ++A+YS
Sbjct: 419 RPAIHMDCLCWVKRDSYLPVGSQGLKAVAKAKLRYDPVELDPEDMCRMAVEQPQVLANYS 478

Query: 431 VSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVICPNK 490
           VSDAVATYYLYM YVHPFIF+L TIIPM PDE+LRKGSGTLCE LLMV+AY A ++ PNK
Sbjct: 479 VSDAVATYYLYMKYVHPFIFALNTIIPMEPDEILRKGSGTLCETLLMVEAYHAQIVYPNK 538

Query: 491 HQSDPEKFYR-NHLLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQLLNNLDRDLQ 549
           HQS+  K     H+L+SETY+GGHVE LESGVFR+D+P  F+LDP+  +QL   +D  L+
Sbjct: 539 HQSELNKLSNEGHVLDSETYVGGHVEALESGVFRADIPCRFRLDPAMVKQLQEQVDAVLR 598

Query: 550 YAIKVEGKMDLESVSNYDEVKNAIMEKLLRLQEEPIREECPLIYHLDVAAMYPNIILTNR 609
           +AI+VE  + LE V N DEV+  I++ L  L + P R E P+IYHLDV AMYPNIILTNR
Sbjct: 599 HAIEVEEGIPLEKVLNLDEVRQEIVQGLQGLHDIPNRLEQPVIYHLDVGAMYPNIILTNR 658

Query: 610 LQPPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYYHLKKQIESE-FVDGT 668
           LQP ++V+D  C ACDFN+PG  C R ++W+WRGE+    R+++  +++Q+E+E F    
Sbjct: 659 LQPSAMVSDLDCAACDFNKPGVRCKRSMDWLWRGEMLPASRNEFQRIQQQLETEKFPPLF 718

Query: 669 NGHLSKSFLDLPKMEQQSRLKDRLKKYCQKAYKRV-LDKPVTELREAGICMRENSFYVDT 727
            G   ++F +L K +Q +  K RL  YC+KAYK+  L K   E R + IC +ENSFYVDT
Sbjct: 719 PGGPQRAFHELSKEDQAAYEKKRLTDYCRKAYKKTKLTK--LETRTSTICQKENSFYVDT 776

Query: 728 VRSFRDRRYEYKGLNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHKCILNSFYG 787
           VR+FRDRRYEYKGL KV K  ++ A ASG++ +I+ A+   VLYDSLQLAHKCILNSFYG
Sbjct: 777 VRAFRDRRYEYKGLTKVAKASVNAAVASGDAAEIKAAKGREVLYDSLQLAHKCILNSFYG 836

Query: 788 YVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLPGSFPENFT 847
           YVMR+GARW+SM MAG+V  TG+ II  AR +IE++G+PLELDTDGIWC+LPGSFP+ FT
Sbjct: 837 YVMRRGARWHSMPMAGIVCLTGSNIITKAREIIERVGRPLELDTDGIWCILPGSFPQEFT 896

Query: 848 FKT 850
             T
Sbjct: 897 IHT 899


>gi|413936998|gb|AFW71549.1| putative DNA polymerase epsilon catalytic subunit family protein
           [Zea mays]
          Length = 1856

 Score =  885 bits (2286), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 416/498 (83%), Positives = 456/498 (91%)

Query: 282 CVGEDIEDLEYTPKPEFEGYFKVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPF 341
           CVGEDI+DLEYTPKPEFEGYF+V NV  E++LL+ WF+HMQEVKPGIYVTYNGD+FDWPF
Sbjct: 20  CVGEDIDDLEYTPKPEFEGYFRVKNVQTELDLLKAWFSHMQEVKPGIYVTYNGDFFDWPF 79

Query: 342 LETRAAHHGFKMSEELGFQCDKNQGECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKA 401
           LE RAAHHG KM+EE+GFQCD NQGECRAKF+CHLDCFAWVKRDSYLPQGSQGLKAVTKA
Sbjct: 80  LEKRAAHHGIKMNEEIGFQCDNNQGECRAKFSCHLDCFAWVKRDSYLPQGSQGLKAVTKA 139

Query: 402 KLGYDPLEVNPEDMVRFAKEKPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPD 461
           KLGYDPLEVNPEDMVRFA E+PQ MASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPD
Sbjct: 140 KLGYDPLEVNPEDMVRFAMEQPQTMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPD 199

Query: 462 EVLRKGSGTLCEMLLMVQAYKANVICPNKHQSDPEKFYRNHLLESETYIGGHVECLESGV 521
           EVLRKGSGTLCEMLLMVQA+KA+VICPNKHQ+D EKFY N LLESETYIGGHVECLE+GV
Sbjct: 200 EVLRKGSGTLCEMLLMVQAFKASVICPNKHQADLEKFYNNRLLESETYIGGHVECLETGV 259

Query: 522 FRSDLPTSFKLDPSAYEQLLNNLDRDLQYAIKVEGKMDLESVSNYDEVKNAIMEKLLRLQ 581
           FRSDLPT F+L+P AYEQL+ NLDRDL Y I VEGK+D++SV+NYDEVK+AI +KL+ L+
Sbjct: 260 FRSDLPTKFQLEPLAYEQLIGNLDRDLHYVIAVEGKLDIDSVTNYDEVKDAIEQKLVALR 319

Query: 582 EEPIREECPLIYHLDVAAMYPNIILTNRLQPPSIVTDEVCTACDFNRPGKTCLRKLEWVW 641
           + PIREE PLIYHLDVAAMYPNIILTNRLQPPSIVTD  CTACDFNRPGK CLRKLEWVW
Sbjct: 320 DHPIREERPLIYHLDVAAMYPNIILTNRLQPPSIVTDVDCTACDFNRPGKNCLRKLEWVW 379

Query: 642 RGEIFMGKRSDYYHLKKQIESEFVDGTNGHLSKSFLDLPKMEQQSRLKDRLKKYCQKAYK 701
           RGE +M K++DYYH+K+QIESE +       SK FLDL K E   +LKDRLKKYCQKA+K
Sbjct: 380 RGETYMAKKNDYYHIKRQIESELIQSGGIASSKPFLDLSKPEHLLKLKDRLKKYCQKAHK 439

Query: 702 RVLDKPVTELREAGICMRENSFYVDTVRSFRDRRYEYKGLNKVWKGKLSEAKASGNSIKI 761
           RV+DKP+TE+REAGICMRENSFYVDTVRSFRDRRYEYKGLNK WKGKL+EAKASGNS+KI
Sbjct: 440 RVVDKPITEVREAGICMRENSFYVDTVRSFRDRRYEYKGLNKTWKGKLAEAKASGNSMKI 499

Query: 762 QEAQDMVVLYDSLQLAHK 779
           QEAQDMVVLYDSLQLAHK
Sbjct: 500 QEAQDMVVLYDSLQLAHK 517



 Score =  847 bits (2189), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 396/610 (64%), Positives = 476/610 (78%), Gaps = 33/610 (5%)

Query: 1409 DPEVEVLGWQQNAAKIGMQRCAASSQWFNERISLARYAHI-------------------- 1448
            D   + LGWQ  A +  MQRCAAS+QWFNERISLA+YAH+                    
Sbjct: 1250 DNNYQALGWQATAGRTSMQRCAASTQWFNERISLAKYAHVPLGNFELDWLLFTADVFFSR 1309

Query: 1449 --------LWISDDGVPDLGGTSEEDECFADEVHQPVLTYPGAYRKVSVELKIHHLSVNA 1500
                    LWISDDG+PDLGGT E + CFADEV QP LTYPGAYR+VSVELKIHHL+VNA
Sbjct: 1310 ALRDQQQVLWISDDGIPDLGGTYEGETCFADEVIQPALTYPGAYRRVSVELKIHHLAVNA 1369

Query: 1501 LLKSNQVNEMEGGGLFGFDQDMNSGPYNNELCGFDETTSSAPAFRVVKQLIQRCLTDAVT 1560
            LLKS+QV+EMEGG +  F  D+  G    E   FD+ +   PAF+V+KQLIQRC++DAV+
Sbjct: 1370 LLKSSQVDEMEGGSIGSFGNDVPPGSNATE-TDFDDASLCIPAFQVLKQLIQRCISDAVS 1428

Query: 1561 SGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEFRKLGATIIFANF 1620
            SGNVFADAILQHLYRWLCSP SKLHDP LHR+LH VM+KVFA+LLAE RKLGA +IFANF
Sbjct: 1429 SGNVFADAILQHLYRWLCSPRSKLHDPALHRLLHNVMKKVFALLLAELRKLGANVIFANF 1488

Query: 1621 SKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLFMDQYNYGGIPAR 1680
            SK+IIDTGK DLS+A AYCDSLL+ LQTR+LFEWIELEP+HFWHSLLFMDQYNYGGI A+
Sbjct: 1489 SKIIIDTGKVDLSSAHAYCDSLLRTLQTRDLFEWIELEPLHFWHSLLFMDQYNYGGIQAK 1548

Query: 1681 AD--ESLDDDSQVDIVSSWNIAEYLPKEIQDHFVLVVSEFMYIPWKHAQKLAASRASLQE 1738
                +S D D+ +DIVSSWN+AE LPK+ QDHFVL+VSEF+YIPWK  ++  A++A++++
Sbjct: 1549 TQNVDSSDGDNDIDIVSSWNMAEDLPKDTQDHFVLIVSEFLYIPWKFMKEQVAAQATIRD 1608

Query: 1739 GSSCTPSITVAAAENFESHIVQYVKGEISSYFTGKLLSIVRDAIHHMKKMNNDQHNSPGV 1798
             +SCTPS+T+ AAEN E  ++++++ +IS+YF  KLL  V D +HH K  +  + + P  
Sbjct: 1609 DTSCTPSVTIMAAENLEGQVIEHLRDKISNYFADKLLRTVSDILHHFKGKSKHESDEPA- 1667

Query: 1799 MQTAANIHKVDAPLEFIKHVCAAFALDQNVQHDVLVMRKNLLKYVRVREFAPEAEFRDPC 1858
             ++  + HK DA LEFIKH+CA  ALDQNVQHD+L MRKNLLK VRV+EFAPEA+F+DPC
Sbjct: 1668 -KSDPHTHKGDAALEFIKHICAVLALDQNVQHDILRMRKNLLKLVRVKEFAPEAQFQDPC 1726

Query: 1859 PSFILPNVICSYCNDCRDLDLCRDMALLAQDWHCAMPQCGQPYDREVMENALLQIVRQRE 1918
             SF LPNVICSYCNDCRDLDLCRD AL  Q+W CA+PQCGQPY RE MENALLQ+VRQRE
Sbjct: 1727 ASFTLPNVICSYCNDCRDLDLCRDSALQGQEWRCAVPQCGQPYHREQMENALLQVVRQRE 1786

Query: 1919 RLYHLQDLVCIRCNQVKAAHLAEQCACAGSFRCKEDASDFRSKMQIFLNIANRQGFQLLQ 1978
            RLYHLQDLVC+RC QVKAAHL+EQC+C GSFRCKE+ S F SKM++FL +A  Q F LLQ
Sbjct: 1787 RLYHLQDLVCVRCRQVKAAHLSEQCSCGGSFRCKEEPSYFLSKMRVFLKVAVSQKFPLLQ 1846

Query: 1979 ECTSWILEVQ 1988
            +C  WILE +
Sbjct: 1847 DCVQWILEAR 1856



 Score =  735 bits (1898), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 379/568 (66%), Positives = 435/568 (76%), Gaps = 29/568 (5%)

Query: 855  KKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEFEVDGPYKAMILPAS 914
            KKLTISYPCVMLN DVARNNTNDQYQTL DPV+KTY THSECSIEFEVDGPYKAMILPAS
Sbjct: 520  KKLTISYPCVMLNADVARNNTNDQYQTLKDPVNKTYTTHSECSIEFEVDGPYKAMILPAS 579

Query: 915  KEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFLHGSTIEECYSA 974
            KEEGILIKKRYAVFN+DGTLAELKGFEIKRRGELKLIKVFQAE+FDKFLHGST+EECYSA
Sbjct: 580  KEEGILIKKRYAVFNEDGTLAELKGFEIKRRGELKLIKVFQAEVFDKFLHGSTLEECYSA 639

Query: 975  VAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLADYGEQKSCAVTTARRLSDFLG 1034
            VA+VANRWLDLLDNQG DIADSEL+D+ISESSTMSKSL DYGEQKSCAVTTA+RL++FLG
Sbjct: 640  VASVANRWLDLLDNQGIDIADSELLDFISESSTMSKSLVDYGEQKSCAVTTAKRLAEFLG 699

Query: 1035 DTMVKDKGLRCQYIVACEPQGTPVSERAVPVAIFETDAEIMKFYLRKWCKTSSDVGIRSI 1094
            D+MVKDKGL CQYIVA EPQGTPVSERAVPVAIFETD EI K YLRKW + SSD  IRSI
Sbjct: 700  DSMVKDKGLHCQYIVAREPQGTPVSERAVPVAIFETDPEIAKHYLRKWFRFSSDANIRSI 759

Query: 1095 VDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLYKKVREKEDKFRQRKLVDIF 1154
            VDWSYYKQRLSSAIQKIITIPAAMQK+SNPVPRV+HPDWL+KKVREK+D+FRQRKL DIF
Sbjct: 760  VDWSYYKQRLSSAIQKIITIPAAMQKISNPVPRVLHPDWLHKKVREKDDRFRQRKLRDIF 819

Query: 1155 SSLKKDDF---LNKTCNAETNLMDENVEDLEDFPKK-----RRNSVNGPRPIVRCFEVNN 1206
            S L K++    LN+T + E  L+    +DL   P       + N+ NG   +     ++ 
Sbjct: 820  SPLAKEEGLHNLNRTGDMEDLLISN--KDLRKNPSHGLDIDKENNPNGAS-VGSGLNISK 876

Query: 1207 EQKTVKTTDQVDSLRQQLEPSEVSDQQPSSQNAIDTENIDRIVDYKGWLELKKRKWKDNL 1266
            +Q+   T   V    Q              QNA   E +D+  DY+GWL+ KKRKWK   
Sbjct: 877  KQQNCMTGLNVPCTSQ-------------IQNAASYETVDKGTDYQGWLDAKKRKWKYVR 923

Query: 1267 DRRKKQKLGSLRASHQANG-VSESLGDMINHKEAQRRTGVGSYFRRQETAMTRCHWQIIQ 1325
            +++K+++LG+       N  +S    + +      R T    +F++QE A+ R HWQIIQ
Sbjct: 924  EQKKRRRLGAAATFDDPNALLSARHANQLPVNSRNRST----FFQKQELALFRSHWQIIQ 979

Query: 1326 LVPSSQSGVFLAWVVVEGIMVRIPITVPRLFYLNSKDPIVEKFPGRRVNKTLPHGRRSFN 1385
            L  S+  G F AWVV EGIM +IPI VPR FYLNSK P+ E+FPGRRV K LPHGR  FN
Sbjct: 980  LASSTVPGHFFAWVVAEGIMFKIPINVPRTFYLNSKAPVTEEFPGRRVKKILPHGRPCFN 1039

Query: 1386 LIEVMIDEDQFRKESKKLAALLADPEVE 1413
            LIEV+  E+QFR E KKLAA LA+P+VE
Sbjct: 1040 LIEVVTTEEQFRAEGKKLAAHLAEPDVE 1067


>gi|240280736|gb|EER44240.1| DNA polymerase epsilon catalytic subunit A [Ajellomyces capsulatus
            H143]
          Length = 2111

 Score =  883 bits (2282), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 466/951 (49%), Positives = 631/951 (66%), Gaps = 76/951 (7%)

Query: 483  ANVICPNKHQSDPEKFYRNHLLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQLLN 542
             N+I PNKH   PE F+  HLL+S+TY+GGHVE +E+GVFRSD+P +F +DP+A ++LL+
Sbjct: 401  GNIILPNKHTEPPEAFWNGHLLDSQTYVGGHVESIEAGVFRSDIPVNFTVDPAAIDELLH 460

Query: 543  NLDRDLQYAIKVEGKMDLESVSNYDEVKNAIMEKLLRLQEEPIREECPLIYHLDVAAMYP 602
            +LD  L+++I VE K  L+ V+NYD+VK  I +KLL L+E P R E P IYHLDVA+MYP
Sbjct: 461  DLDAALKFSIVVEEKKALDDVTNYDKVKAQIAKKLLNLKETPNRNERPSIYHLDVASMYP 520

Query: 603  NIILTNRLQPPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYYHLKKQIES 662
            NI+ TNRLQP S++ +  C  CDFNRPGKTC R++ W WRGE    KR +Y  +++ + +
Sbjct: 521  NIMTTNRLQPDSMIQESDCAVCDFNRPGKTCDRRMPWSWRGEYIPAKRDEYNMIRRAVAN 580

Query: 663  E-FVDGTNGHLSKSFLDLPKMEQQSRLKDRLKKYCQKAYKRVLDKPVTELREAGICMREN 721
            E F   T     ++F +L   EQ + +K RL+ Y +K Y R+ +    + REA IC REN
Sbjct: 581  EKFPGKTKKSPMRAFEELSTSEQATIVKKRLQDYSKKIYHRIYESKTVQ-REAIICQREN 639

Query: 722  SFYVDTVRSFRDRRYEYKGLNKVWKGKLSEAKASGN-SIKIQEAQDMVVLYDSLQLAHKC 780
             FYVDTVRSFRDRRY++KG  KVWKGK    KA+G  +++I+EA+ M++L+DSLQLAHK 
Sbjct: 640  PFYVDTVRSFRDRRYDFKGQQKVWKGKTDSLKAAGAPAVEIEEAKKMIILFDSLQLAHKV 699

Query: 781  ILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLPG 840
            ILNSFYGYVMRKG+RWYSMEMAGV   TGA IIQ AR L+E+IG+PLELDTDGIWC+LPG
Sbjct: 700  ILNSFYGYVMRKGSRWYSMEMAGVTCLTGAHIIQMARELVERIGRPLELDTDGIWCMLPG 759

Query: 841  SFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEF 900
            +FPENF F  K+  KKL ISYPCVMLN  V    TN QYQTLVDP +  YETHS+ SI F
Sbjct: 760  TFPENFAFTLKN-GKKLPISYPCVMLNHLVHGRFTNHQYQTLVDPKTFRYETHSDNSIFF 818

Query: 901  EVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFD 960
            EVDGPY+AMILP SKEE   +KKRYAVFN DG+LAELKGFE+KRRGELKLIK+FQ ++F 
Sbjct: 819  EVDGPYRAMILPTSKEEDKNLKKRYAVFNHDGSLAELKGFEVKRRGELKLIKIFQTQIFK 878

Query: 961  KFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLADYGEQKS 1020
             FL G+T+ E Y+AVA VANRWLD+L   G  +AD ELID I E+ +MSK+L +YG QKS
Sbjct: 879  FFLEGTTLTETYAAVAEVANRWLDVLHMHGTTLADEELIDLICENRSMSKTLEEYGNQKS 938

Query: 1021 CAVTTARRLSDFLGDTMVKDKGLRCQYIVACEPQGTPVSERAVPVAIFETDAEIMKFYLR 1080
             ++TTA+RL++FLGD MVKDKGL C+YI++ +P+ +P+++RA+PVAIF  +  + +F+LR
Sbjct: 939  TSITTAKRLAEFLGDQMVKDKGLNCKYIISSKPRTSPITDRAIPVAIFSAEYSVKRFFLR 998

Query: 1081 KWCK-TSSDVGIRSIVDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLYKKVR 1139
            KW K    D+  R+I+DW YY +RL S +QK+ITIPAA+QK+ NPVPRV HP+WL +++ 
Sbjct: 999  KWLKDDPGDMDPRTIIDWDYYLERLGSVVQKLITIPAALQKIRNPVPRVPHPEWLQRRIN 1058

Query: 1140 EKEDKFRQRKLVDIFSSLKKDDFLNKTCNAETNLMDENVE---DLEDF-----PKKRRNS 1191
             K+DKF+Q+K+ ++F      D         TN+MD  +    D+ED       K R N 
Sbjct: 1059 IKDDKFKQKKMTELFEKTPLSDL-------PTNIMDHRLPASGDIEDMVSQSTQKHRYNI 1111

Query: 1192 VNGPRPIVRCFEVNNEQKTVKTTDQVDSLRQQLEPSEVSDQQPSSQNAIDTENIDRIVDY 1251
            VN               K  +    +++   QL+P       P++  +I TE      DY
Sbjct: 1112 VN---------------KGAQKRKVLENSASQLDPFA---SLPATMPSI-TE------DY 1146

Query: 1252 KGWLELKKRKWKDNLDRR-KKQKLGSLRASHQANGVSESLGDMINHKEAQRRTGVGSYFR 1310
            + WL+ +K+KWK     R +++KL   R S   N                    +G++FR
Sbjct: 1147 ESWLKYQKQKWKIQKQARIRRRKLFGERTSTTTN-------------------VIGNFFR 1187

Query: 1311 RQETAMTRCHWQIIQLVPSSQSGVFLAWVVVEGIMVRIPITVPRLFYLNSKDPIVEKFPG 1370
             Q   +    WQI+QL  +   G    +V+++  +  + + VPR  ++N K    E  P 
Sbjct: 1188 NQAELVYVKTWQILQLKETDIPGEVRMFVLIDHKIHALTVKVPRHIFINLKH---EDLPD 1244

Query: 1371 --------RRVNKTLPHGRRSFNLIEVMIDEDQFRKESKKLAALLADPEVE 1413
                    ++VN +LP+G  S +L ++++ ED + KE+ K++ LL  P VE
Sbjct: 1245 VNLVDCSVQKVNHSLPNGHPSVHLFKLIMPEDTYLKEADKISILLNHPSVE 1295



 Score =  271 bits (693), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 144/356 (40%), Positives = 211/356 (59%), Gaps = 25/356 (7%)

Query: 15  KKQKLIRSAEEELEAKLGYDLFSEGDKRLGWLLTFASSSLEDEDTRKVYSCIDLYFVSQD 74
           +K + +R A    EA +G+  F  G  R            ED       + ++ YF+  +
Sbjct: 43  EKYQAVRLANSIDEA-MGFPRFEAGKPRT-----------EDPKVPGGRAGVEYYFLDDN 90

Query: 75  GSTFKSKYKFRPYFYAATKEKMEMDVEAYLRRRYESQIADIEILEKEDLDLKNHLSGLHK 134
           G++FK+  ++ PYF  ATK   E +VE + +R +E  +  ++ +EKEDL + NHL G  +
Sbjct: 91  GTSFKAIVEYDPYFLIATKRGHEGEVEEWCKRMFEGMVKSVKQVEKEDLQMPNHLLGHKR 150

Query: 135 SYLKISFDTVQQLMDVKKDLLHVVERNQAKFDAAEAYESILTG---------KREQRPQD 185
            +L++SF  V  L+ V+K +L + ++N+   +A + Y  + +          +   RPQ 
Sbjct: 151 RFLQLSFANVGDLLGVRKSILPIAQKNKKNVNAMDTYAEMASSNVGFDLFDEEVNDRPQK 210

Query: 186 -FLDC---IVDLREYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLLEKRVDLLQRAEVHV 241
            F+D    +VD+REYDVPYH+R +ID D+R G+WY V   +    L    D L+RA+  V
Sbjct: 211 AFIDASEYVVDIREYDVPYHVRVSIDKDIRIGKWYSVQSKNGVISLSCIEDRLKRADPVV 270

Query: 242 CAFDIETTKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGY 301
            A+DIETTKLPLKFPD   D IMMISYM+DGQG+LI NRE V EDI D EYTPKPE++G 
Sbjct: 271 LAYDIETTKLPLKFPDPVIDQIMMISYMIDGQGFLITNREIVSEDIADFEYTPKPEYDGP 330

Query: 302 FKVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEEL 357
           F + N  +E  ++  +FAH++E KP +  TYNGD+FDW F+E RA+  G  +   L
Sbjct: 331 FTIFNEPDEKRVIERFFAHIKEAKPTVIATYNGDFFDWAFVEARASVQGIDIGNIL 386



 Score =  236 bits (601), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 173/635 (27%), Positives = 298/635 (46%), Gaps = 73/635 (11%)

Query: 1408 ADPEVEVLGWQQNAAKIGMQRCAASSQWFNERISLARYAHI------------------- 1448
            +D ++  LGWQ   AK       A   W      LARY  +                   
Sbjct: 1492 SDNDLPPLGWQPFVAKQITMHYLALGSWLYHLGELARYGDVPICNLEKDDPKYLIDIAYA 1551

Query: 1449 ---------LWISDDGVPDLGGTSEEDECFA--DEVHQPVLTYPGAYRKVSVELKIHHLS 1497
                     LW S   +PD  G  E+D+      +V  P    PGAY  V +EL+I +L+
Sbjct: 1552 RRLEQNNIVLWWSPSPLPDHAGY-EKDDILGPMQKVDMPSSNNPGAYSSVCIELEIRNLA 1610

Query: 1498 VNALLKSNQVNEMEGG--GLFGFDQDMNSGPYNNELCGFDETTSSAPAFRVVKQLIQRCL 1555
            +N +L S+ +NE+EG    L        +G  +     + +T  ++    V++ L++   
Sbjct: 1611 INTILTSSLINELEGSESTLLNPVAPNETGASDGTGVLYSDTAFASAGILVLRDLVKSWW 1670

Query: 1556 TDAVTSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEFRKLGATI 1615
             +A   GN  AD ++QHL RW+ S  S L+D  LH  +  + +K F  L+ +FR++G+ I
Sbjct: 1671 AEAC-QGNGMADIMVQHLIRWVESSDSFLYDRSLHYHVQMMSKKAFQQLMTDFRRVGSQI 1729

Query: 1616 IFANFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLFMDQYNYG 1675
            IFA+ S++++ T K +++ A AY   ++K+++ + LF +++LE   +W  L++ D++N+G
Sbjct: 1730 IFASPSRLLLQTTKGEVANAYAYSQYIVKSIKEKPLFHFLDLEIKEYWDYLVWYDEFNFG 1789

Query: 1676 GIPARADESLDDDSQ-VDIVSSWNIAEYLPKEIQDHFVLVVSEFMYIPWKHAQKLAASRA 1734
            G      E ++ ++Q ++ V  W ++++LP  +Q  F+  V E  YI   H  K    R 
Sbjct: 1790 G--KGCQEVVEAENQELETVMHWQLSKFLPTPLQTVFLDWVVE--YIELMHGLK----RP 1841

Query: 1735 SLQEGSSCTPSITVAAAENFESHIVQYVKGEISSYFTGKLLSIVRDAIHHMKKMNNDQ-- 1792
            ++    +  P  T      F+S I     GE++S  T      ++  I  + +   D+  
Sbjct: 1842 TIDNEGADPPRATQLP---FQS-ITDSDSGEMTSILTESFSKPLKRQIAGLIRRQRDELL 1897

Query: 1793 ----------HNSPGVMQTAANIHKVDAPLEFIKHVCAAFALDQNVQHDVLVMRKNLLKY 1842
                         PG    A+  H+ +  LE +K +    +L +    +  ++R+ LL  
Sbjct: 1898 HPELASDYVFPTIPGASWRASK-HERNPTLELVKSLMQVLSLCKTTTLETRLLRRELLAL 1956

Query: 1843 VRVREFAPEAEFRDPCPSFILPNVICSYCNDCRDLDLCRDMALLAQD-----------WH 1891
              V+EF+ E  F +P  S   P +IC++C   RDLD+CRD  LL ++           W 
Sbjct: 1957 FEVKEFSDEGRFENPSGSLKFPQLICNHCTMTRDLDICRDGDLLPENSADNIAAGSKPWC 2016

Query: 1892 CAMPQCGQPYDREVMENALLQIVRQRERLYHLQDLVCIRCNQVKAAHLAEQCACAGSFRC 1951
            C    C   YDR  +E  L+  V+     +  QDL C +C  ++ +   E C+C+GS+  
Sbjct: 2017 CL--SCATEYDRLALEERLIGQVQGLVVEWQTQDLKCSKCKSLRVSEFMEHCSCSGSWIA 2074

Query: 1952 KEDASDFRSKMQIFLNIANRQGFQLLQECTSWILE 1986
              D S    K+ +F ++A   G ++L   T+ +LE
Sbjct: 2075 TVDLSGIEKKLNLFKSVAKFYGLKMLTTVTNGVLE 2109


>gi|429963243|gb|ELA42787.1| hypothetical protein VICG_00102 [Vittaforma corneae ATCC 50505]
          Length = 1806

 Score =  873 bits (2255), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 467/1144 (40%), Positives = 695/1144 (60%), Gaps = 55/1144 (4%)

Query: 24   EEELEAKLGYDLFSEGDKRLGWLLTFASSSLEDEDTRKVYSCIDLYFVSQDGSTFKSKYK 83
            E  L+ + GYD +   + + GWLL+++    +++        +  YFV +  + FK +  
Sbjct: 9    ESLLDLQFGYDFYYGFEPKHGWLLSYSIEKNKNDSLN-----VTFYFVDEFSNNFKVQVP 63

Query: 84   FRPYFYAATKEKMEMDVEAYLRRRYESQIADIEILEKEDLDLKNHLSGLHKSYLKISFDT 143
            + P      KE++   VE YL++RYE  I   E++EK D+   NHL+   K +LK+ F T
Sbjct: 64   YFPSIIVECKEELS-SVEGYLKKRYEGCIQSTEVVEKIDVKEYNHLNKPPKKFLKLYFRT 122

Query: 144  VQQLMDVKKDLLHVVERNQAKFDAAEAYESILTGKREQRPQDFLDCIVDLREYDVPYHIR 203
                 +  K+L  V+  +       E Y  +    +E+   D    I+ + EYD+PY I 
Sbjct: 123  ETSFQECIKNLKDVILESTKNRYKNEIYSDLF---QEKCANDIASEIIQIHEYDIPYEIH 179

Query: 204  FAIDNDVRCGQWYDVSISSTGPLLEKRVDLLQRAEVHVCAFDIETTKLPLKFPDADYDII 263
               ++ +RCG WY++S       +E     +   ++ + AFDIETTK PLKFP+ + D +
Sbjct: 180  VGNEHKIRCGCWYEISYDGESYKIELDKQKIAYPDLRIFAFDIETTKPPLKFPNPESDQV 239

Query: 264  MMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNVNNEIELLRLWFAHMQE 323
            MMIS M D  G LI NR+ V EDI+  EY  K +    F+V+N  +E  LL  +   + E
Sbjct: 240  MMISIMTDEFGELITNRQIVSEDIQVFEYHAKDDMRCMFRVSNEPSEEALLIRFLEVILE 299

Query: 324  VKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDKNQGECRAKFACHLDCFAWVK 383
             +P I  TYNG +FDWPF+  R + +   +   + F+      +C   F  HLDC+ WVK
Sbjct: 300  HRPHIITTYNGSFFDWPFICKRLSKYNMNLFNSIQFKEVNEYFDC--PFIIHLDCYKWVK 357

Query: 384  RDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQMMASYSVSDAVATYYLYMT 443
            RDSYLP  +QGLK V + KLGY P E++PEDM R A E PQ +ASYSVSDAVATYYLY+ 
Sbjct: 358  RDSYLPMNNQGLKDVARIKLGYFPDEIDPEDMFRLASEDPQRLASYSVSDAVATYYLYLK 417

Query: 444  YVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVICPNKHQSDPEKFYRNHL 503
            YVH  IFS+ ++IP+ P +VL KG+GTLCE LL+ ++    ++ P K ++D  ++Y+  L
Sbjct: 418  YVHSHIFSVCSLIPLPPVQVLCKGAGTLCESLLLAESVSYKILVPLKKRTDGLEYYKGRL 477

Query: 504  LESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQLLNNLDRDLQYAIKVEGKMDLESV 563
            +E+ TY+GGHVE L +G++RSD    F +D    E +++NLD+ L+         D  S 
Sbjct: 478  IENLTYVGGHVESLRAGIYRSDFYQEFNIDDQVVELIIDNLDQILE---------DYTSC 528

Query: 564  SNYDEVKNAIMEKLLRLQEEPIREECPLIYHLDVAAMYPNIILTNRLQPPSIVTDEVCTA 623
            ++Y   K   + ++     + + + C  IYHLDV AMYPNIILTNRLQP S+V D+VC  
Sbjct: 529  TDYQAKKEQYICEIKSCIGKIMSKGC--IYHLDVGAMYPNIILTNRLQPISVVNDDVCIR 586

Query: 624  CDFNRPGKTCLRKLEWVWRGEIFMGKRSDYYHLKKQIESE-FVDGTNGHLSK-SFLDLPK 681
            CD+N     C +K++W+ R E    + ++   ++ Q+E+E F D  +G L K ++ DLP+
Sbjct: 587  CDYNDEKNQCRKKMQWISRVEYMPPEANEINMIRNQLENETFADFNSGILEKVAYKDLPE 646

Query: 682  MEQQSRLKDRLKKYCQKAYKRVLDKPVTELRE-AGICMRENSFYVDTVRSFRDRRYEYKG 740
              + + LKDR+ +Y +K YKRV  K V E +E   IC RE  FYV+TVR FRD+RY YK 
Sbjct: 647  GRRNAILKDRISEYSKKIYKRV--KKVEENKEDIYICQREIPFYVETVRKFRDQRYVYKN 704

Query: 741  LNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHKCILNSFYGYVMRKGARWYSME 800
            L   +K    E + +  S    E +  +V+Y+SLQ+A+KCILNSFYGY MR+G+RW+S+E
Sbjct: 705  L---YKKAAQEYEKNPTS----ENKKNLVVYNSLQVAYKCILNSFYGYAMREGSRWFSLE 757

Query: 801  MAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLPGSFPENFTFKTKDLKKKLTIS 860
            MA  V   G +II+ A+ L+EKIG PLELDTDGIW +LP  FP   +F  K      ++S
Sbjct: 758  MAATVCNVGGQIIRLAKELVEKIGMPLELDTDGIWGMLPIRFPHTISFNGK------SVS 811

Query: 861  YPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEFEVDGPYKAMILPASKEEGIL 920
               ++LN  V +  TN QYQ  V      ++   + SI FE+DGPYK M++P+S EE  L
Sbjct: 812  VLSLILNYFVCKKFTNHQYQ--VANGHGGFDAVQQNSIFFELDGPYKTMVIPSSTEENKL 869

Query: 921  IKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFLHGSTIEECYSAVAAVAN 980
            +KKRY VFN+D  + ELKGFE+KRRGEL  IK FQ ++F+ F  G+T++ECY ++A++ N
Sbjct: 870  LKKRYVVFNEDNKIVELKGFELKRRGELHFIKKFQEDIFNHFNDGTTLKECYDSLASICN 929

Query: 981  RWLDLLDNQGKDIADSELIDYISESSTMSKSLADYGEQKSCAVTTARRLSDFLGDTMVKD 1040
             W+ ++D QG  + D  +    SES  MSKS+  Y  +KS  ++TA+RLS+FLGD ++++
Sbjct: 930  YWMGIIDQQGGPLDDESIFYLFSESRNMSKSVESYANRKSNILSTAKRLSEFLGDDILEE 989

Query: 1041 KGLRCQYIVACEPQGTPVSERAVPVAIFETDAEIMKFYLRKWCKTSSDVGIRSIVDWSYY 1100
            K L+C++I++  P   P+ +RA+PV IF +  +   FYL+KW KT+++  +R I+DW YY
Sbjct: 990  K-LKCEFIISKFPTSAPIVDRAIPVMIFRSAEK--DFYLKKWLKTANNTDLRDILDWGYY 1046

Query: 1101 KQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDWL----------YKKVREKEDKFRQRKL 1150
            ++R  + +Q++I IPA +Q + NP+P V  P+W+          +  V++ ED   ++ L
Sbjct: 1047 RKRFENILQRLIVIPAYLQNIENPIPSVSLPNWMKDASKRERLEFSVVKDIEDSVVKKNL 1106

Query: 1151 VDIF 1154
             D+F
Sbjct: 1107 SDVF 1110


>gi|378756087|gb|EHY66112.1| DNA polymerase II [Nematocida sp. 1 ERTm2]
          Length = 2008

 Score =  859 bits (2219), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 477/1179 (40%), Positives = 671/1179 (56%), Gaps = 66/1179 (5%)

Query: 33   YDLFSEGDKRLGWLLTFASSSLEDEDTRKVYSCIDLYFVSQDGSTFKSKYKFRPYFYAAT 92
            Y+++S    + GWLL +    +   + +++ +    YF+  + + F+ +  F P      
Sbjct: 16   YNMYSGEAAKEGWLLNYQVKDIMSSEKKRLLTTAVFYFIDAENNNFRVEMPFSPKILLEV 75

Query: 93   KEKMEMDVEAYLRRRYESQIADIEILEKEDLDLKNHLSGLHKSYLKISFDTVQQLMDVKK 152
                   VE YL  RY   I    I  + DL   NHL+     YL IS  + +    ++K
Sbjct: 76   AASSLSSVEDYLNGRYPDSIKATGIATRTDLQKMNHLATDGSEYLVISMYSEKDAQQIRK 135

Query: 153  DLLHVVERNQAKFDAAEAYESILTGKREQR-----PQDFLDCIVDLREYDVPYHIRFAID 207
            ++  +  RN A+    E+  ++L  K ++      P+++   I+ + EYD+   I+ AI+
Sbjct: 136  EIDEITRRNTAR--QKESAVTLLFAKEKRACLLPDPEEY---ILSICEYDISASIQMAIE 190

Query: 208  NDVRCGQWYDVSISSTGPLLEKRVDLLQRAEVHVCAFDIETTKLPLKFPDADYDIIMMIS 267
             D+  G+WY V     G ++     +L   ++ + +FDIETTK PLKFP AD D +MMIS
Sbjct: 191  LDINAGKWYTVQYMG-GYIIGPSTRVLP-PDLRIFSFDIETTKDPLKFPSADKDQVMMIS 248

Query: 268  YMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNVNNEIELLRLWFAHMQEVKPG 327
             M    G+LI NRE VGEDI   E+ PK +  G F++ N  NE  +L  +   +   KP 
Sbjct: 249  IMSTQDGWLITNREIVGEDIMPFEFRPKSDIGGEFEICNEKNEKNVLNKFVEILLAYKPH 308

Query: 328  IYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDKNQGECRAKFACHLDCFAWVKRDSY 387
            +  TYNGD+FDWPF+E R A HG  M   +GF     + E       HLDC+ WVKRDSY
Sbjct: 309  VVTTYNGDFFDWPFVEARLAVHGINMQTSIGFYKTAME-EYICHHILHLDCYKWVKRDSY 367

Query: 388  LPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQMMASYSVSDAVATYYLYMTYVHP 447
            LP GSQGLK+VTKAKLGY P E++PE MV  AK  P++MASYSVSDAVAT++LY+ YVHP
Sbjct: 368  LPAGSQGLKSVTKAKLGYFPDEIDPEYMVECAKSNPKLMASYSVSDAVATHFLYLKYVHP 427

Query: 448  FIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVICPNKHQSDPEKFYRNHLLESE 507
            FIFSLA++IP+ PD+VLRKGSGTLCE LLM +AY   V+ P+K +S     Y  ++ ES 
Sbjct: 428  FIFSLASLIPLPPDDVLRKGSGTLCEALLMKEAYGCGVLIPSKKKSHILHNYNGYMAESL 487

Query: 508  TYIGGHVECLESGVFRSDLPTSFKLDPSAYEQLLNNLDRDLQYAIKVEGKMDLESVSNYD 567
            +Y+GGHVECL+SG++RSD    F  +    E+++       Q    V+ +++ +   N  
Sbjct: 488  SYVGGHVECLKSGLYRSDFEYEFAFNRQDLEKMVE------QVGCVVDSELEGKECYNRS 541

Query: 568  EVKNAIMEKLLRLQEEPIREECPLIYHLDVAAMYPNIILTNRLQPPSIVTDEVCTACDFN 627
            +V + I EKL  LQ+       P IYHLDV AMYPNIILTNRLQP +++ D+ C  C + 
Sbjct: 542  QVISEIQEKLRILQKSEKARMKPHIYHLDVGAMYPNIILTNRLQPTAVMDDKACAHCAYA 601

Query: 628  RPGKTCLRKLEWVWRGEIFMGKRSDYYHLKKQIESEFV---------------DGTNGHL 672
                 C RK+ W  R E+    + D   + K+  + F+               +  +   
Sbjct: 602  PEKDICQRKMRWKGRAEVLAVGKKDVQTITKKTRNMFIARKRAQNVQDKTKAEEAIDKRG 661

Query: 673  SKSF-LDLPKMEQ-QSRLKDRLKKYCQKAYKRVLDKPVTELREAGICMRENSFYVDTVRS 730
            ++ +  D P+ +  +  L+D L  + +   K+  +  V E +E+ IC REN FYV+ VR 
Sbjct: 662  NQPYKKDTPRQQSFEECLRDNLIAHAKNTSKKTRE-VVIEDKESIICQRENPFYVNAVRK 720

Query: 731  FRDRRYEYKGLNKVWKGKLSEAKASGNSIKIQEAQ------DMVVLYDSLQLAHKCILNS 784
            FRDRR EYK L K       EAK      + ++AQ          +YDSLQ+AHKC+LNS
Sbjct: 721  FRDRRNEYKRLAK-------EAKEQAKKAEKEDAQLAGDWKKKAGIYDSLQIAHKCVLNS 773

Query: 785  FYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLPGSFPE 844
            FYGYVM+KGARW+SMEMA VV  TG+ IIQN + +I+  G  LELDTDGIW +LP SFP 
Sbjct: 774  FYGYVMKKGARWHSMEMAAVVCQTGSNIIQNTKAVIDAFGITLELDTDGIWALLPESFPL 833

Query: 845  NFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEFEVDG 904
            N+T  T D    +  SY C +LN  +    +N QY  L    S  Y   +E SI FE+DG
Sbjct: 834  NYTLNTPD--GSVRFSYICSLLNFMLLDKFSNPQY--LKKEESGKYTVSTENSIRFEIDG 889

Query: 905  PYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFLH 964
            PYKAM LP S +EG  IKKRY V N    ++ELKGFE KRRGELK +K FQ E F+  L 
Sbjct: 890  PYKAMFLPGSMKEGESIKKRYIVINSAEKISELKGFEFKRRGELKFVKAFQEETFNLLLQ 949

Query: 965  GSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLADYGEQKSCAVT 1024
            G T++ECY+ +A  A+ W+D+++ + + ++   +  Y  E+ ++ KS   Y   KS ++T
Sbjct: 950  GKTLQECYAVLAECADYWIDIIETRAESMSQDVIFGYFGETRSLGKSADAYSSVKSTSLT 1009

Query: 1025 TARRLSDFLGDTMVKDKGLRCQYIVACEPQGTPVSERAVPVAIFETDAEIMKFYLRKWCK 1084
             A RLS+ LG   V  KG  C +I+   P+  PV+ R+VP A+F +D E    YL+KW +
Sbjct: 1010 AAARLSELLGQG-VAAKGTACSFIIVKYPENAPVTSRSVPQAVFHSDPETRTRYLQKWLE 1068

Query: 1085 TS-SDVGIRSIVDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLYKKVREKED 1143
                   IR I+DWSYY +RLSS I +I+ +PA++Q +SNPV RV  P W          
Sbjct: 1069 VKVVPEDIREIIDWSYYLERLSSIITRILIVPASLQGISNPVHRVQAPSW---------- 1118

Query: 1144 KFRQRKLVDIFSSLKKDDFLNKTCNAETNLMDENVEDLE 1182
              R RK+ D      K   + K    E N+    +E+L+
Sbjct: 1119 AIRHRKITDFLPCASKKAEVAKELIGEENVGAVTLEELQ 1157


>gi|326519380|dbj|BAJ96689.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 727

 Score =  851 bits (2199), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 398/613 (64%), Positives = 476/613 (77%), Gaps = 34/613 (5%)

Query: 1409 DPEVEVLGWQQNAAKIGMQRCAASSQWFNERISLARYAHI-------------------- 1448
            D   + LGWQ  A +  MQRCAAS+QWFNERISLARYAH+                    
Sbjct: 116  DNNYQALGWQATAGRTSMQRCAASTQWFNERISLARYAHVPLGNFELDWLLFTADVFFSR 175

Query: 1449 --------LWISDDGVPDLGGTSEEDECFADEVHQPVLTYPGAYRKVSVELKIHHLSVNA 1500
                    LWISDDG+PDLGGT E D CFADEV QP LTYPGAYR+VSVELKIHHL+VN+
Sbjct: 176  ALHDQQQVLWISDDGIPDLGGTYEGDTCFADEVIQPALTYPGAYRRVSVELKIHHLAVNS 235

Query: 1501 LLKSNQVNEMEGGGLFGFDQDMNSGPYNNELCGFDETTSSAPAFRVVKQLIQRCLTDAVT 1560
            LLKS+QV+EMEGG +  F+ D+  GP   E   +++ +   PAF+V+KQLIQRC++DAV+
Sbjct: 236  LLKSSQVDEMEGGSIGNFENDIPPGPNATET-DYNDASLCLPAFQVLKQLIQRCISDAVS 294

Query: 1561 SGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEFRKLGATIIFANF 1620
            SGNVFADAILQHLYRWLCSP S+LHDP LHR+LH VM+KVFA+LLAEFRKLGA +IFANF
Sbjct: 295  SGNVFADAILQHLYRWLCSPRSRLHDPALHRLLHNVMKKVFALLLAEFRKLGANVIFANF 354

Query: 1621 SKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLFMDQYNYGGIPAR 1680
            SK+IIDTGK DL +A+AYCDSLLK LQTR+LFEWIELEP+H+WHSLLFMDQYNYGGI A+
Sbjct: 355  SKIIIDTGKVDLPSARAYCDSLLKTLQTRDLFEWIELEPLHYWHSLLFMDQYNYGGIQAK 414

Query: 1681 AD-----ESLDDDSQVDIVSSWNIAEYLPKEIQDHFVLVVSEFMYIPWKHAQKLAASRAS 1735
                   +S D +  +DIVSSWNIAEYLPK  QDHFVL+VSEF+Y+PWK+ ++  A RA+
Sbjct: 415  TQNVTSVDSSDGEDDIDIVSSWNIAEYLPKATQDHFVLIVSEFLYVPWKYMKEQVACRAA 474

Query: 1736 LQEGSSCTPSITVAAAENFESHIVQYVKGEISSYFTGKLLSIVRDAIHHMKKMNNDQHNS 1795
            +++ +SCTPSIT+ AAEN E  +V Y++G+I +YF  KLL+IV D + H K     +   
Sbjct: 475  VRDDTSCTPSITIMAAENLEGQVVDYLRGQIGTYFAEKLLTIVSDILLHFKGKGKSESVG 534

Query: 1796 PGVMQTAANIHKVDAPLEFIKHVCAAFALDQNVQHDVLVMRKNLLKYVRVREFAPEAEFR 1855
            P   +   ++HK DA LEFIKH+CA  ALDQNVQHD+L MRKNLLK VRV+EFAPEA+F+
Sbjct: 535  PSNRELDPHLHKGDAALEFIKHICAVLALDQNVQHDILRMRKNLLKLVRVKEFAPEAQFQ 594

Query: 1856 DPCPSFILPNVICSYCNDCRDLDLCRDMALLAQDWHCAMPQCGQPYDREVMENALLQIVR 1915
            DPC +FILPNVICSYCNDCRDLDLCRD  L   +W CA+PQCGQPY RE MENALLQIVR
Sbjct: 595  DPCAAFILPNVICSYCNDCRDLDLCRDSTLQGHEWRCAVPQCGQPYHREEMENALLQIVR 654

Query: 1916 QRERLYHLQDLVCIRCNQVKAAHLAEQCACAGSFRCKEDASDFRSKMQIFLNIANRQGFQ 1975
            QRERLYHLQDLVC+RC QVKAAH++EQC C GSFRCKE+A  F  KM++FLN+A  Q F+
Sbjct: 655  QRERLYHLQDLVCVRCRQVKAAHVSEQCNCGGSFRCKEEAPQFLGKMRVFLNVAVSQKFE 714

Query: 1976 LLQECTSWILEVQ 1988
            LLQ+C  WILEV+
Sbjct: 715  LLQDCVRWILEVR 727


>gi|413937000|gb|AFW71551.1| putative DNA polymerase epsilon catalytic subunit family protein [Zea
            mays]
          Length = 1717

 Score =  848 bits (2192), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 396/610 (64%), Positives = 476/610 (78%), Gaps = 33/610 (5%)

Query: 1409 DPEVEVLGWQQNAAKIGMQRCAASSQWFNERISLARYAHI-------------------- 1448
            D   + LGWQ  A +  MQRCAAS+QWFNERISLA+YAH+                    
Sbjct: 1111 DNNYQALGWQATAGRTSMQRCAASTQWFNERISLAKYAHVPLGNFELDWLLFTADVFFSR 1170

Query: 1449 --------LWISDDGVPDLGGTSEEDECFADEVHQPVLTYPGAYRKVSVELKIHHLSVNA 1500
                    LWISDDG+PDLGGT E + CFADEV QP LTYPGAYR+VSVELKIHHL+VNA
Sbjct: 1171 ALRDQQQVLWISDDGIPDLGGTYEGETCFADEVIQPALTYPGAYRRVSVELKIHHLAVNA 1230

Query: 1501 LLKSNQVNEMEGGGLFGFDQDMNSGPYNNELCGFDETTSSAPAFRVVKQLIQRCLTDAVT 1560
            LLKS+QV+EMEGG +  F  D+  G    E   FD+ +   PAF+V+KQLIQRC++DAV+
Sbjct: 1231 LLKSSQVDEMEGGSIGSFGNDVPPGSNATE-TDFDDASLCIPAFQVLKQLIQRCISDAVS 1289

Query: 1561 SGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEFRKLGATIIFANF 1620
            SGNVFADAILQHLYRWLCSP SKLHDP LHR+LH VM+KVFA+LLAE RKLGA +IFANF
Sbjct: 1290 SGNVFADAILQHLYRWLCSPRSKLHDPALHRLLHNVMKKVFALLLAELRKLGANVIFANF 1349

Query: 1621 SKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLFMDQYNYGGIPAR 1680
            SK+IIDTGK DLS+A AYCDSLL+ LQTR+LFEWIELEP+HFWHSLLFMDQYNYGGI A+
Sbjct: 1350 SKIIIDTGKVDLSSAHAYCDSLLRTLQTRDLFEWIELEPLHFWHSLLFMDQYNYGGIQAK 1409

Query: 1681 AD--ESLDDDSQVDIVSSWNIAEYLPKEIQDHFVLVVSEFMYIPWKHAQKLAASRASLQE 1738
                +S D D+ +DIVSSWN+AE LPK+ QDHFVL+VSEF+YIPWK  ++  A++A++++
Sbjct: 1410 TQNVDSSDGDNDIDIVSSWNMAEDLPKDTQDHFVLIVSEFLYIPWKFMKEQVAAQATIRD 1469

Query: 1739 GSSCTPSITVAAAENFESHIVQYVKGEISSYFTGKLLSIVRDAIHHMKKMNNDQHNSPGV 1798
             +SCTPS+T+ AAEN E  ++++++ +IS+YF  KLL  V D +HH K  +  + + P  
Sbjct: 1470 DTSCTPSVTIMAAENLEGQVIEHLRDKISNYFADKLLRTVSDILHHFKGKSKHESDEPA- 1528

Query: 1799 MQTAANIHKVDAPLEFIKHVCAAFALDQNVQHDVLVMRKNLLKYVRVREFAPEAEFRDPC 1858
             ++  + HK DA LEFIKH+CA  ALDQNVQHD+L MRKNLLK VRV+EFAPEA+F+DPC
Sbjct: 1529 -KSDPHTHKGDAALEFIKHICAVLALDQNVQHDILRMRKNLLKLVRVKEFAPEAQFQDPC 1587

Query: 1859 PSFILPNVICSYCNDCRDLDLCRDMALLAQDWHCAMPQCGQPYDREVMENALLQIVRQRE 1918
             SF LPNVICSYCNDCRDLDLCRD AL  Q+W CA+PQCGQPY RE MENALLQ+VRQRE
Sbjct: 1588 ASFTLPNVICSYCNDCRDLDLCRDSALQGQEWRCAVPQCGQPYHREQMENALLQVVRQRE 1647

Query: 1919 RLYHLQDLVCIRCNQVKAAHLAEQCACAGSFRCKEDASDFRSKMQIFLNIANRQGFQLLQ 1978
            RLYHLQDLVC+RC QVKAAHL+EQC+C GSFRCKE+ S F SKM++FL +A  Q F LLQ
Sbjct: 1648 RLYHLQDLVCVRCRQVKAAHLSEQCSCGGSFRCKEEPSYFLSKMRVFLKVAVSQKFPLLQ 1707

Query: 1979 ECTSWILEVQ 1988
            +C  WILE +
Sbjct: 1708 DCVQWILEAR 1717



 Score =  736 bits (1900), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 379/568 (66%), Positives = 435/568 (76%), Gaps = 29/568 (5%)

Query: 855  KKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEFEVDGPYKAMILPAS 914
            KKLTISYPCVMLN DVARNNTNDQYQTL DPV+KTY THSECSIEFEVDGPYKAMILPAS
Sbjct: 381  KKLTISYPCVMLNADVARNNTNDQYQTLKDPVNKTYTTHSECSIEFEVDGPYKAMILPAS 440

Query: 915  KEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFLHGSTIEECYSA 974
            KEEGILIKKRYAVFN+DGTLAELKGFEIKRRGELKLIKVFQAE+FDKFLHGST+EECYSA
Sbjct: 441  KEEGILIKKRYAVFNEDGTLAELKGFEIKRRGELKLIKVFQAEVFDKFLHGSTLEECYSA 500

Query: 975  VAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLADYGEQKSCAVTTARRLSDFLG 1034
            VA+VANRWLDLLDNQG DIADSEL+D+ISESSTMSKSL DYGEQKSCAVTTA+RL++FLG
Sbjct: 501  VASVANRWLDLLDNQGIDIADSELLDFISESSTMSKSLVDYGEQKSCAVTTAKRLAEFLG 560

Query: 1035 DTMVKDKGLRCQYIVACEPQGTPVSERAVPVAIFETDAEIMKFYLRKWCKTSSDVGIRSI 1094
            D+MVKDKGL CQYIVA EPQGTPVSERAVPVAIFETD EI K YLRKW + SSD  IRSI
Sbjct: 561  DSMVKDKGLHCQYIVAREPQGTPVSERAVPVAIFETDPEIAKHYLRKWFRFSSDANIRSI 620

Query: 1095 VDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLYKKVREKEDKFRQRKLVDIF 1154
            VDWSYYKQRLSSAIQKIITIPAAMQK+SNPVPRV+HPDWL+KKVREK+D+FRQRKL DIF
Sbjct: 621  VDWSYYKQRLSSAIQKIITIPAAMQKISNPVPRVLHPDWLHKKVREKDDRFRQRKLRDIF 680

Query: 1155 SSLKKDDF---LNKTCNAETNLMDENVEDLEDFPKK-----RRNSVNGPRPIVRCFEVNN 1206
            S L K++    LN+T + E  L+    +DL   P       + N+ NG   +     ++ 
Sbjct: 681  SPLAKEEGLHNLNRTGDMEDLLISN--KDLRKNPSHGLDIDKENNPNGAS-VGSGLNISK 737

Query: 1207 EQKTVKTTDQVDSLRQQLEPSEVSDQQPSSQNAIDTENIDRIVDYKGWLELKKRKWKDNL 1266
            +Q+   T   V    Q              QNA   E +D+  DY+GWL+ KKRKWK   
Sbjct: 738  KQQNCMTGLNVPCTSQ-------------IQNAASYETVDKGTDYQGWLDAKKRKWKYVR 784

Query: 1267 DRRKKQKLGSLRASHQANG-VSESLGDMINHKEAQRRTGVGSYFRRQETAMTRCHWQIIQ 1325
            +++K+++LG+       N  +S    + +      R T    +F++QE A+ R HWQIIQ
Sbjct: 785  EQKKRRRLGAAATFDDPNALLSARHANQLPVNSRNRST----FFQKQELALFRSHWQIIQ 840

Query: 1326 LVPSSQSGVFLAWVVVEGIMVRIPITVPRLFYLNSKDPIVEKFPGRRVNKTLPHGRRSFN 1385
            L  S+  G F AWVV EGIM +IPI VPR FYLNSK P+ E+FPGRRV K LPHGR  FN
Sbjct: 841  LASSTVPGHFFAWVVAEGIMFKIPINVPRTFYLNSKAPVTEEFPGRRVKKILPHGRPCFN 900

Query: 1386 LIEVMIDEDQFRKESKKLAALLADPEVE 1413
            LIEV+  E+QFR E KKLAA LA+P+VE
Sbjct: 901  LIEVVTTEEQFRAEGKKLAAHLAEPDVE 928



 Score =  605 bits (1559), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 293/356 (82%), Positives = 322/356 (90%)

Query: 424 QMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKA 483
           Q MASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQA+KA
Sbjct: 23  QTMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAFKA 82

Query: 484 NVICPNKHQSDPEKFYRNHLLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQLLNN 543
           +VICPNKHQ+D EKFY N LLESETYIGGHVECLE+GVFRSDLPT F+L+P AYEQL+ N
Sbjct: 83  SVICPNKHQADLEKFYNNRLLESETYIGGHVECLETGVFRSDLPTKFQLEPLAYEQLIGN 142

Query: 544 LDRDLQYAIKVEGKMDLESVSNYDEVKNAIMEKLLRLQEEPIREECPLIYHLDVAAMYPN 603
           LDRDL Y I VEGK+D++SV+NYDEVK+AI +KL+ L++ PIREE PLIYHLDVAAMYPN
Sbjct: 143 LDRDLHYVIAVEGKLDIDSVTNYDEVKDAIEQKLVALRDHPIREERPLIYHLDVAAMYPN 202

Query: 604 IILTNRLQPPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYYHLKKQIESE 663
           IILTNRLQPPSIVTD  CTACDFNRPGK CLRKLEWVWRGE +M K++DYYH+K+QIESE
Sbjct: 203 IILTNRLQPPSIVTDVDCTACDFNRPGKNCLRKLEWVWRGETYMAKKNDYYHIKRQIESE 262

Query: 664 FVDGTNGHLSKSFLDLPKMEQQSRLKDRLKKYCQKAYKRVLDKPVTELREAGICMRENSF 723
            +       SK FLDL K E   +LKDRLKKYCQKA+KRV+DKP+TE+REAGICMRENSF
Sbjct: 263 LIQSGGIASSKPFLDLSKPEHLLKLKDRLKKYCQKAHKRVVDKPITEVREAGICMRENSF 322

Query: 724 YVDTVRSFRDRRYEYKGLNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHK 779
           YVDTVRSFRDRRYEYKGLNK WKGKL+EAKASGNS+KIQEAQDMVVLYDSLQLAHK
Sbjct: 323 YVDTVRSFRDRRYEYKGLNKTWKGKLAEAKASGNSMKIQEAQDMVVLYDSLQLAHK 378


>gi|387595811|gb|EIJ93434.1| DNA polymerase II [Nematocida parisii ERTm1]
          Length = 1902

 Score =  844 bits (2180), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 468/1117 (41%), Positives = 666/1117 (59%), Gaps = 41/1117 (3%)

Query: 42   RLGWLLTFASSSLEDEDTRKVYSCIDLYFVSQDGSTFKSKYKFRPYFYAATKEKMEMDVE 101
            R GWLL +        DT+++ +C  LYF+  D   F+ +  F P       E     VE
Sbjct: 32   RDGWLLNYHMKEKVCPDTKRLITCAILYFIDSDNENFRVEVPFPPKILVEAPEHALSAVE 91

Query: 102  AYLRRRYESQIADIEILEKEDLDLKNHLSGLHKSYLKISFDTVQQLMDVKKDLLHVVERN 161
             YL  +Y+  I  I I ++ DL   NHL+     YL +S  + +    +K+++  +  RN
Sbjct: 92   DYLIGKYQDSIKTIGITKRIDLQKVNHLASDGSQYLILSMYSEKDASLIKREVEEISRRN 151

Query: 162  QAKFDAAEAYESILTGKR-----EQRPQDFLDCIVDLREYDVPYHIRFAIDNDVRCGQWY 216
              K    E   S+L  +      E  P++F   I ++ EYD+P  ++ AI+ ++  G+WY
Sbjct: 152  MIK--KKEDATSLLFAREKRQCNEPEPEEF---IKNVYEYDIPVSVQMAIELNINAGKWY 206

Query: 217  DVSISSTGPLLEKRVDLLQRAEVHVCAFDIETTKLPLKFPDADYDIIMMISYMLDGQGYL 276
             +  +    + E     +   ++ + +FDIETTK PLKFP AD D IMMIS M    G+L
Sbjct: 207  TIEYNGKYTITES--SKVIPPDLRIFSFDIETTKDPLKFPSADKDQIMMISVMTTLGGWL 264

Query: 277  IINRECVGEDIEDLEYTPKPEFEGYFKVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDY 336
            +INRE VG DI+  E+ P  +  G F + N  +E  LL  +   +   KP +  TYNGD+
Sbjct: 265  LINRETVGADIQPFEFRPTSDIGGEFDIFNEKSEKHLLNKFMELLHTYKPHVITTYNGDF 324

Query: 337  FDWPFLETRAAHHGFKMSEELGFQCDKNQGECRAKFACHLDCFAWVKRDSYLPQGSQGLK 396
            FDWPF+E R   HG  +   LGF+ +  + E    +  HLDC+ WVKRDSYLP GSQGLK
Sbjct: 325  FDWPFVEKRLEVHGINLHTSLGFK-NNTKDEYVCDYILHLDCYKWVKRDSYLPAGSQGLK 383

Query: 397  AVTKAKLGYDPLEVNPEDMVRFAKEKPQMMASYSVSDAVATYYLYMTYVHPFIFSLATII 456
            +VTKAKLGY P E++PE+MV FA+  P++MASYSVSDA+AT++LY+ YVHPFIFSLA++I
Sbjct: 384  SVTKAKLGYFPDEIDPENMVHFARTNPKLMASYSVSDAIATHFLYLKYVHPFIFSLASLI 443

Query: 457  PMSPDEVLRKGSGTLCEMLLMVQAYKANVICPNKHQSDPEKFYRNHLLESETYIGGHVEC 516
            P+ PD+VLRKGSGTLCE LL+ +AY  +V+ P K ++     Y   + ES +Y+GGHVEC
Sbjct: 444  PLPPDDVLRKGSGTLCETLLVKEAYFCHVLIPEKKRAPLLHNYNGRMAESISYVGGHVEC 503

Query: 517  LESGVFRSDLPTSFKLDPSAYEQLLNNLDRDLQYAIKVEGKMDLESVSNYDEVKNAIMEK 576
            L+SG++RSD    F  +    +++++ ++  +   ++++GK  L    N  EV   I  K
Sbjct: 504  LKSGIYRSDFEYEFTFNKEYIDRMISEVESIVD--VELKGKECL----NKKEVVEDIQIK 557

Query: 577  LLRLQEEPIREECPLIYHLDVAAMYPNIILTNRLQPPSIVTDEVCTACDFNRPGKTCLRK 636
            L  L         P IYHLDV AMYPNIILTNRLQP +I  ++ C  C +      C RK
Sbjct: 558  LKDLASMNKAYMKPHIYHLDVGAMYPNIILTNRLQPSAITDEKKCGQCIYAEGKDICQRK 617

Query: 637  LEWVWRGEIFMGKRSDYYHLKKQIESEF------VDGTNGHL-SKSFLDLPKMEQQSRLK 689
            + W  R E+    +     + K     F      +    G L ++    +P+ E+Q   K
Sbjct: 618  MNWKGRAEVLAVDKKSVETISKSTREAFYKQRRDILTNKGTLPNQKGGKMPRFEEQ--FK 675

Query: 690  DRLKKYCQKAYKRVLDKPVTELREAGICMRENSFYVDTVRSFRDRRYEYKGLNKVWKGKL 749
            + L ++ +K  K+  +  V E +++ IC REN FYV+ VR FRDRR EYK L K  K K 
Sbjct: 676  NNLIEHAKKTSKKTRE-IVIEDKKSIICQRENPFYVNAVRKFRDRRNEYKRLAKQAKTKT 734

Query: 750  SEAKAS---GNSIKIQEAQDMVVLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVT 806
             EA+A    G    ++ A+   + YDSLQ+AHKC+LNSFYGYVM+KGARW+SMEMA VV 
Sbjct: 735  KEAEAEAGPGTETAVEWAKKAGI-YDSLQIAHKCVLNSFYGYVMKKGARWHSMEMAAVVC 793

Query: 807  YTGAKIIQNARLLIEKIGKPLELDTDGIWCVLPGSFPENFTFKTKDLKKKLTISYPCVML 866
             TG+ IIQN + +I+  G  LELDTDGIW +LP SFP N+T  TK+    +  SY C +L
Sbjct: 794  QTGSSIIQNTKTVIDAFGVTLELDTDGIWALLPESFPLNYTLNTKE--GPIGFSYICSLL 851

Query: 867  NVDVARNNTNDQYQTLVDPVSKTYETHSECSIEFEVDGPYKAMILPASKEEGILIKKRYA 926
            N  +    +N QYQ  +   +  Y   SE SI+FE+DGPY+AM LP S ++G  IKKRY 
Sbjct: 852  NYMLLDLFSNHQYQ--IKEETGEYAVTSENSIQFEIDGPYRAMFLPGSTKQGESIKKRYI 909

Query: 927  VFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFLHGSTIEECYSAVAAVANRWLDLL 986
            V N+   ++ELKGFE KRRGELK +K FQ E+F+  L G+T+EECY  +A  A+ W+D++
Sbjct: 910  VINNKEKISELKGFEFKRRGELKFVKSFQEEMFNLLLSGNTLEECYMTLAECADYWIDII 969

Query: 987  DNQGKDIADSELIDYISESSTMSKSLADYGEQKSCAVTTARRLSDFLGDTMVKDKGLRCQ 1046
            + + + +A  E+ +Y  E+  MSKS       K+  +T A RLS+ LG  +V  KG+ C 
Sbjct: 970  ETKAQALAQDEIFNYFGETRNMSKSADALSMVKTTCLTAAERLSELLGQNVVV-KGMSCS 1028

Query: 1047 YIVACEPQGTPVSERAVPVAIFETDAEIMKFYLRKWCKTSSDVG-IRSIVDWSYYKQRLS 1105
            +I++  P+  PV+ RA+P ++F  +    + YL+KW +  +    IR I+DWSYY +RLS
Sbjct: 1029 FIISKYPENEPVTSRAIPQSVFYAEKGQKEKYLQKWLRMKTVPNDIREIIDWSYYLERLS 1088

Query: 1106 SAIQKIITIPAAMQKVSNPVPRVVHPDWL--YKKVRE 1140
            + I +II IPA++Q + NPV RV  P W   +KK+ E
Sbjct: 1089 NIIARIIIIPASLQGLKNPVGRVNPPQWAVHHKKITE 1125


>gi|26327237|dbj|BAC27362.1| unnamed protein product [Mus musculus]
          Length = 716

 Score =  839 bits (2168), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 409/654 (62%), Positives = 501/654 (76%), Gaps = 13/654 (1%)

Query: 340 PFLETRAAHHGFKMSEELGFQCDKNQGECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVT 399
           PF+E RAA HG  M +E+GFQ D +QGE +A    H+DC  WVKRDSYLP GS  LKA  
Sbjct: 36  PFVEARAAIHGLSMYQEIGFQKD-SQGEYKAPQCIHMDCLRWVKRDSYLPVGSHNLKAAA 94

Query: 400 KAKLGYDPLEVNPEDMVRFAKEKPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMS 459
           KAKLGYDP+E++PEDM R A E+PQ +A+YSVSDAVATYYLYM YVHPFIF+L TIIPM 
Sbjct: 95  KAKLGYDPVELDPEDMCRMATEQPQTLATYSVSDAVATYYLYMKYVHPFIFALCTIIPME 154

Query: 460 PDEVLRKGSGTLCEMLLMVQAYKANVICPNKHQSDPEKFYRN-HLLESETYIGGHVECLE 518
           PDEVLRKGSGTLCE LLMVQA+ AN+I PNK + +  K   + H+L++ETY+GGHVE LE
Sbjct: 155 PDEVLRKGSGTLCEALLMVQAFHANIIFPNKQEQEFNKLTDDGHMLDAETYVGGHVEALE 214

Query: 519 SGVFRSDLPTSFKLDPSAYEQLLNNLDRDLQYAIKVEGKMDLESVSNYDEVKNAIMEKLL 578
           SGVFRSD+P  F+++P+A++ LL  +++ +++AI+ E K+ +E  +N+ EV   I  KL 
Sbjct: 215 SGVFRSDIPCRFRMNPAAFDFLLQRVEKTMRHAIEEEEKVPVEQATNFQEVCEQIKTKLT 274

Query: 579 RLQEEPIREECPLIYHLDVAAMYPNIILTNRLQPPSIVTDEVCTACDFNRPGKTCLRKLE 638
            L++ P R ECPLIYHLDV AMYPNIILTNRLQP +IV +  C ACDFN+PG +C RK+ 
Sbjct: 275 SLKDVPNRIECPLIYHLDVGAMYPNIILTNRLQPSAIVDEATCAACDFNKPGASCQRKMA 334

Query: 639 WVWRGEIFMGKRSDYYHLKKQIESE-----FVDGTNGHLSKSFLDLPKMEQQSRLKDRLK 693
           W WRGE     RS+Y+ ++ Q+ESE     F +G     +++F +L + EQ    K RL 
Sbjct: 335 WQWRGEFMPASRSEYHRIQHQLESEKFPPLFPEGP----ARAFHELSREEQAKYEKRRLA 390

Query: 694 KYCQKAYKRVLDKPVTELREAGICMRENSFYVDTVRSFRDRRYEYKGLNKVWKGKLSEAK 753
            YC+KAYK++    V E R   IC RENSFYVDTVR+FRDRRYE+KGL+KVWK KLS A 
Sbjct: 391 DYCRKAYKKIHVTKVEE-RLTTICQRENSFYVDTVRAFRDRRYEFKGLHKVWKKKLSAAV 449

Query: 754 ASGNSIKIQEAQDMVVLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKII 813
             G++ +++  ++M +LYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAG+V +TGA II
Sbjct: 450 EVGDASEVKRCKNMEILYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGIVCFTGANII 509

Query: 814 QNARLLIEKIGKPLELDTDGIWCVLPGSFPENFTFKTKDLKK-KLTISYPCVMLNVDVAR 872
             AR LIE+IG+PLELDTDGIWCVLP SFPENF  KT + KK KLTISYP  MLN+ V  
Sbjct: 510 TQARELIEQIGRPLELDTDGIWCVLPNSFPENFVIKTTNAKKPKLTISYPGAMLNIMVKE 569

Query: 873 NNTNDQYQTLVDPVSKTYETHSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDG 932
             TN QYQ L +P S TY THSE SI FEVDGPY AMILPASKEEG  +KKRYAVFN+DG
Sbjct: 570 GFTNHQYQELTEPSSLTYVTHSENSIFFEVDGPYLAMILPASKEEGKKLKKRYAVFNEDG 629

Query: 933 TLAELKGFEIKRRGELKLIKVFQAELFDKFLHGSTIEECYSAVAAVANRWLDLL 986
           +LAELKGFE+KRRGEL+LIK+FQ+ +F+ FL GST+EE Y +VA VA+ WLD+L
Sbjct: 630 SLAELKGFEVKRRGELQLIKIFQSSVFEAFLKGSTLEEVYGSVAKVADYWLDVL 683


>gi|3387878|gb|AAC72340.1| DNA polymerase epsilon [Trichomonas vaginalis]
          Length = 883

 Score =  824 bits (2129), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 430/879 (48%), Positives = 572/879 (65%), Gaps = 29/879 (3%)

Query: 191  VDLREYDVPYHIRFAIDNDVRCGQWYDVSISSTGPL--LEKRVDLLQRA--EVHVCAFDI 246
             +LRE DV Y+ RF ID +VR G+WY++   +  P   LE   D  +R      + AFDI
Sbjct: 22   AELRECDVQYYQRFCIDTNVRVGRWYNIDNVNGEPQISLEAENDDAERPGPTPRILAFDI 81

Query: 247  ETTKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTN 306
            E +K PL+FP+ + D IMMISYMLDG GYL+INRE   E+IED EY+P PE+   F VTN
Sbjct: 82   ECSKQPLQFPNTETDQIMMISYMLDGTGYLVINREWFSEEIEDFEYSPLPEYFCEFHVTN 141

Query: 307  VNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDKNQG 366
              NE E+L+ WF H++EVKP I+VT+NGD+FDW F++ RA      M  E+GF   K   
Sbjct: 142  YPNEREMLKGWFNHIREVKPHIFVTFNGDFFDWEFIQERARILNLSMYYEIGFH--KFGE 199

Query: 367  ECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQMM 426
            E  + +A H+DCF WV+RDSYLP GSQGLKAVTKAKL Y+PLE++PED+     E PQ +
Sbjct: 200  EFVSNYAPHIDCFHWVQRDSYLPAGSQGLKAVTKAKLNYNPLELDPEDICPLGMEDPQRL 259

Query: 427  ASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVI 486
            A+YS SDA ATYYLY  Y+H FIFSL+TIIP+ PD+ LR+G+GTLCE LLM +AY+ N+ 
Sbjct: 260  ANYSASDAYATYYLYEKYIHGFIFSLSTIIPLHPDDCLRRGTGTLCESLLMSEAYRNNIF 319

Query: 487  CPNKHQSDPEKFYRNHLLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQLLNNLDR 546
             PNK  +D  K +  H+L SETY GG VE +ESG+FR     S     +  +        
Sbjct: 320  FPNKTTNDEMKEHEGHVLISETYSGGRVEAIESGIFRVIFQQSSMSTLNNIKISSTESRE 379

Query: 547  DLQYAIKVEGKMDLESVSNYDEVKNAIMEKLLRLQEEPIREECPLIYHLDVAAMYPNIIL 606
                +   + K+  E ++N DEVK+ I+  L  L++ P R   P+I HLDVAAMYPNIIL
Sbjct: 380  SSISSXTQKLKIKEEDIANLDEVKHNIISALEDLRDNPHRSVSPVIMHLDVAAMYPNIIL 439

Query: 607  TNRLQPPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYYHLKKQIESEFVD 666
            TNRLQP +IVT++ C  C     G  C RK++W+WRGE F    ++   + +Q+E+E  +
Sbjct: 440  TNRLQPTAIVTEDFCAKCRMK--GDQCQRKMQWIWRGEWFPSTPNENKAIIRQLETETFE 497

Query: 667  GTNGHLSKSFLDLPKMEQQSRLKDRLKKYCQKAYKRVLDKPVTE---LREAGICMRENSF 723
            G      +S+  L   ++    K RL  +C+K Y+    KP  E   ++ + ICM+ + F
Sbjct: 498  G------QSWYKLSTQDKAKYYKQRLNNFCKKHYQ----KPKVEKEIMKTSIICMKAHDF 547

Query: 724  YVDTVRSFRDRRYEYKGLNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHKCILN 783
            Y++TVR+FRDRRY YK   K +  +L+ AK        + A+ M++L DSLQLAHK ILN
Sbjct: 548  YIETVRAFRDRRYVYKNKVKYYTKQLNLAKTPAER---ELAKKMILLNDSLQLAHKAILN 604

Query: 784  SFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLPGSFP 843
            SFYGYVMR  ARW SMEMAGVVT TGA II+  R +I  +G+PLELDTDGIWC LP +FP
Sbjct: 605  SFYGYVMRAAARWRSMEMAGVVTNTGATIIKQTRAIISGLGRPLELDTDGIWCALPDTFP 664

Query: 844  ENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVD----PVSKTYETHSECSIE 899
               T   K+ +KK   ++PC MLN +V     N QY TLV          Y  H E SI 
Sbjct: 665  MFQTLIMKNGEKK-GFNFPCSMLNENVDNGFANHQYHTLVQRGATEADDIYRVHKENSIF 723

Query: 900  FEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELF 959
            FE DGPY AM LPA++EEG  +KKRYAVFN  G + ELKGFEIKRRGE K+IK+ Q ++F
Sbjct: 724  FEPDGPYHAMFLPAAREEGKKLKKRYAVFNSHGRITELKGFEIKRRGEWKMIKMLQKDVF 783

Query: 960  DKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLADYGEQK 1019
            + +++G T +E Y  VA V  ++L++L   G+ I D+EL+D +SESSTM KSL +YG +K
Sbjct: 784  ESYMYGHTRQEVYDHVADVCRQYLNVLTTHGRTIDDNELLDLLSESSTMIKSLTEYGNRK 843

Query: 1020 SCAVTTARRLSDFLGDTMVKDKGLRCQYIVACEPQGTPV 1058
            S A TTA+RL++ LGD+++  + L+C+YI++  P    V
Sbjct: 844  STASTTAKRLAEVLGDSILNSRSLKCEYIISRLPTSASV 882


>gi|19074730|ref|NP_586236.1| DNA POLYMERASE EPSILON [Encephalitozoon cuniculi GB-M1]
 gi|19069372|emb|CAD25840.1| DNA POLYMERASE EPSILON [Encephalitozoon cuniculi GB-M1]
          Length = 1799

 Score =  822 bits (2122), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 463/1114 (41%), Positives = 654/1114 (58%), Gaps = 64/1114 (5%)

Query: 24   EEELEAKLGYDLFSEGDKRLGWLLTFASSSLEDEDTRKVYSCIDLYFVSQDGSTFKSKYK 83
            +E LE + G+  + EG +R GWLL +A+ +L+D   +       LY +  +G  F  K  
Sbjct: 7    DELLEEQYGFVPYYEGRRREGWLLNYATVTLKDGRMK-----TKLYLIDGEGVEFLVKI- 60

Query: 84   FRPYFYAATKEKMEMDV-EAYLRRRYESQIADIEILEKEDLDLKNHLSGLHKSYLKISFD 142
              PYF +   +  + DV E YLR+RY  +I DIE   + D    NHLS     +LK+ F 
Sbjct: 61   --PYFPSFLVKASDYDVVEEYLRKRYSGEIHDIERTHRVDFKEYNHLSKEPGVFLKVRFK 118

Query: 143  TVQQLMDVKKDLLHVVERNQAKFDAAEAYESILTGKREQRPQDFLDCIVDLREYDVPYHI 202
            T     D  KD+  VV RN  K    + Y+    G R    +DF   IV + E+D+P  +
Sbjct: 119  TDTGFGDAVKDVRRVVARN--KVQRRDEYDCFGEG-RGLNAEDF---IVSICEHDIPVEV 172

Query: 203  RFAIDNDVRCGQWYDVSISSTGPLLEKRVDLLQRAEVHVCAFDIETTKLPLKFPDADYDI 262
              A D  +RCG+WY    +    ++EK  + +   ++ + AFDIET+K PLKFP+AD D 
Sbjct: 173  CAANDLGIRCGRWYGFRYTGEMYVIEKS-ERIVFPDLRILAFDIETSKRPLKFPNADSDE 231

Query: 263  IMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNVNNEIELLRLWFAHMQ 322
            +MMIS   +G G LI+NR  V +DI   EY+PK + +  F   N ++E  +L  +   +Q
Sbjct: 232  VMMISVKTEGYGELIVNRGLVSKDIRGFEYSPKEDMQCTFCAVNESSEEGVLIRFVETIQ 291

Query: 323  EVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDKNQGECRAKFACHLDCFAWV 382
              +P +  T+NG  FD+PFLE R   +G  + E  GF   +      + F  HLDC+ WV
Sbjct: 292  RHRPHLITTFNGALFDFPFLEKRMLRYGISLRETAGFV--RRDEYYISPFIVHLDCYKWV 349

Query: 383  KRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQMMASYSVSDAVATYYLYM 442
            +RDSYLP GSQGLKAVTKAKLGY P EV+PEDMV  A   P+ M SYS SD+VATY+LY+
Sbjct: 350  RRDSYLPAGSQGLKAVTKAKLGYFPDEVDPEDMVGLAVSDPERMGSYSASDSVATYFLYI 409

Query: 443  TYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVICPNKHQSDPEKFYRNH 502
             YV P +FS+ ++IP+ P   L +GSGTLCE LL+ +A    V+ P K +    + +  H
Sbjct: 410  KYVQPHVFSMCSLIPLPPTSALCQGSGTLCEALLISEATAYGVLVPEKRRETKMQEHNGH 469

Query: 503  LLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQLLNNLDRDLQYAIKVEGKMDLES 562
            + ES TY+GGHVECL+SG+FRSD    F +D    + +   +D  L      EG  D+  
Sbjct: 470  IAESITYVGGHVECLKSGIFRSDFEYEFDVDKEFIDTVALKIDEMLSEYRGEEGFEDMRG 529

Query: 563  VSNYDEVKNAIMEKLLR-LQEE--PIREECPLIYHLDVAAMYPNIILTNRLQPPSIVTDE 619
                         K+LR LQE     R E  LIYHLDV AMYPNIILTN+LQP +IV ++
Sbjct: 530  -------------KVLRNLQENRGGFRRE-GLIYHLDVGAMYPNIILTNKLQPIAIVDED 575

Query: 620  VCTACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYYHLKKQIESEFVDGTNGHLSKSFLDL 679
             C  CDF+     C +++EW  + E     R +   ++KQI  E          K F   
Sbjct: 576  ACIRCDFSDESNGCKKRMEWTLKVEYIPAGREETERIRKQIRRE----------KGFAG- 624

Query: 680  PKMEQQSRLKDRLKKYCQKAYKRVLDKPVTELREAGICMRENSFYVDTVRSFRDRRYEYK 739
               ++   L+ R ++Y +  Y+R   +    +R + +C RE  FYV+TVR FRD+RY YK
Sbjct: 625  ---DENEELRQRARRYSKDTYRRAKVRESC-IRSSTVCQREIPFYVETVRKFRDQRYVYK 680

Query: 740  GLNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHKCILNSFYGYVMRKGARWYSM 799
             L+   +     A +       + A   VV+Y SLQ+AHKC+LNSFYGYVMRK +RWYSM
Sbjct: 681  KLHSQAQKAFESASSDEER---KHAMKSVVVYSSLQIAHKCVLNSFYGYVMRKSSRWYSM 737

Query: 800  EMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLPGSFPENFTFKTKDLKKKLTI 859
            EMA +V   G  II+ A+ ++EKIG  LELDTDGIWC++P S   ++T     L      
Sbjct: 738  EMAAIVCNVGGNIIKRAKEVVEKIGISLELDTDGIWCIVPSSLISSYT-----LPSGRRF 792

Query: 860  SYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEFEVDGPYKAMILPASKEEGI 919
            S+   +LN  V +  TN QYQ  VD     Y   +E SI FE+DGPY+AM+LP+S EE  
Sbjct: 793  SFLSSLLNHFVCKEFTNWQYQERVD---GKYVMRAENSIFFEIDGPYRAMLLPSSTEESK 849

Query: 920  LIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFLHGSTIEECYSAVAAVA 979
            L+KKRYA+ + +  +AELKGFEIKRRGEL+++K FQ ELF  FL GS +EECY ++A V 
Sbjct: 850  LLKKRYAIIDSNNRIAELKGFEIKRRGELEIVKKFQEELFLHFLDGSNLEECYESLAGVC 909

Query: 980  NRWLDLLDNQGKDIADSELIDYISESSTMSKSLADYGEQKSCAVTTARRLSDFLGDTMVK 1039
              WLD+L ++G+ + D  +++ +SES +MSK   +Y  +KS    TA R+S+ LG+ +++
Sbjct: 910  RYWLDILKSRGEYLDDDTILELLSESRSMSKGFGEYRGRKSNLTVTALRMSELLGEGILE 969

Query: 1040 DKGLRCQYIVACEPQGTPVSERAVPVAIFETDAEIMKFYLRKWCKTSSDVGIRSIVDWSY 1099
            +K L+C+YIVA  P+   V+ERA+PV +F ++ +  + +LR+W        IR+I+DW Y
Sbjct: 970  EK-LKCEYIVAVYPENGSVAERAIPVVVFRSEQK--EEFLRRWMGRDYLGDIRAIIDWDY 1026

Query: 1100 YKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDW 1133
            Y+QRL   +Q+++ +PA  Q V NP+  +  P W
Sbjct: 1027 YRQRLECVVQRMVILPALSQGVRNPLREIQVPVW 1060



 Score = 44.3 bits (103), Expect = 0.72,   Method: Compositional matrix adjust.
 Identities = 40/179 (22%), Positives = 70/179 (39%), Gaps = 36/179 (20%)

Query: 1811 PLEFIKHVCAAFALDQNVQHDVLVMRKNLLKYVRVREF----APEAEFRDPCPSFILPNV 1866
            PLE  + +    +L Q+ Q     +  N  + + + EF      E +    CPS  + NV
Sbjct: 1629 PLESSRIILRLLSLRQDAQ----TLMSNCYRLLHLSEFEEEKGTEMQLDIGCPSCGMENV 1684

Query: 1867 ICSYCNDCRDLDLCRDMALLAQDWHCAMPQCGQPYDREVMENALLQIVRQRERLYHLQDL 1926
            + S C                        +C +PY ++ +    +   +    L   +DL
Sbjct: 1685 LRSRC-----------------------IKCYKPYPKDAVLEVCMAHAKHLLWLELSRDL 1721

Query: 1927 VCIRCNQVKAAHLAEQCACAGSFRCK---EDASDFR--SKMQIFLNIANRQGFQLLQEC 1980
             C+RC +V    L++ C C G+F+ +   ++  + R  +   IF     R     LQEC
Sbjct: 1722 YCVRCGRVNETKLSDFCKCGGAFKKRGYMKELEELRKVASSPIFDEFCRRISKHFLQEC 1780


>gi|396082315|gb|AFN83925.1| DNA polymerase type-B epsilon [Encephalitozoon romaleae SJ-2008]
          Length = 1779

 Score =  820 bits (2119), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 468/1120 (41%), Positives = 668/1120 (59%), Gaps = 76/1120 (6%)

Query: 24   EEELEAKLGYDLFSEGDKRLGWLLTFASSSLEDEDTRKVYSCIDLYFVSQDGSTFKSKYK 83
            +E LE + G+  + E  +R GW+L +   +L D   +       LY + ++G  F  K  
Sbjct: 7    DELLEEQYGFVPYYENRRREGWVLNYTVVTLRDGRMK-----TKLYLIDEEGGEFLVKI- 60

Query: 84   FRPYFYAATKEKMEMDV-EAYLRRRYESQIADIEILEKEDLDLKNHLSGLHKSYLKISFD 142
              PYF +      + D+ E YLR++Y  +I D+E   + D   +NHL+     +LK+ F 
Sbjct: 61   --PYFPSFLVRASDYDITEEYLRKKYAGEIHDMERTHRIDFKEENHLNKEPGMFLKVRFK 118

Query: 143  TVQQLMDVKKDLLHVVERNQAKFDAAEAYESILTGKREQRPQDFLDCIVDLREYDVPYHI 202
            T     +  K+L  +V RN+ +    +++E    G  E+R  +  + I  + E+D+P  +
Sbjct: 119  TESGFGEALKELKRIVARNRVQ----KSHEYDCFG--EERTTNAENLIESIHEHDIPTEV 172

Query: 203  RFAIDNDVRCGQWYDVSISSTGPLLEKRVDLLQRAEVHVCAFDIETTKLPLKFPDADYDI 262
                D  +RCG+WY    +    ++EK  + +   ++ + AFDIET+K PLKFP+ + D 
Sbjct: 173  ATVNDLKIRCGKWYGFYYTGEMYVVEKS-ERIVFPDLRILAFDIETSKKPLKFPNPESDE 231

Query: 263  IMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNVNNEIELLRLWFAHMQ 322
            +MMIS   +  G LI+NR  V + I   EY PK + +  F V N ++E  +L  +   +Q
Sbjct: 232  VMMISIKTECGGELIVNRRLVSKSIRRFEYNPKEDMQCVFDVVNESDEEGVLIRFVEMIQ 291

Query: 323  EVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDKNQGECRAKFACHLDCFAWV 382
              +P +  T+NG  FD+PFLE R + +G  + E  GF   K++    + F  HLDC+ WV
Sbjct: 292  RHRPHLVTTFNGASFDFPFLEKRMSRYGISLRETAGF-AQKDEYYI-SPFIVHLDCYKWV 349

Query: 383  KRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQMMASYSVSDAVATYYLYM 442
            KRDSYLP GSQGLKAVTKAKLGY P EV+PEDMV  A   P  MASYSVSD+VATY+LY+
Sbjct: 350  KRDSYLPAGSQGLKAVTKAKLGYFPDEVDPEDMVGLAISDPDRMASYSVSDSVATYFLYI 409

Query: 443  TYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVICPNKHQSDPEKFYRNH 502
             YV P +FS+ ++IP+ P   L +GSGTLCE LL+ +A +  V+ P K +    + Y  H
Sbjct: 410  KYVQPHVFSICSLIPLPPALALCQGSGTLCEALLISEAIEYKVVIPEKRKEKKIQEYNGH 469

Query: 503  LLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQLLNNLDRDLQYAIKVEGKMDLES 562
            + ES TY+GG+VECL+SG+FRSD    F++D    +++  NLD               E 
Sbjct: 470  IAESITYVGGYVECLKSGIFRSDFEYDFEMDEGFIDEMALNLD---------------EM 514

Query: 563  VSNYDE---VKNAIMEKLLRLQEE--PIREECPLIYHLDVAAMYPNIILTNRLQPPSIVT 617
            VS Y+E   +++  ++ L  LQE    IR E  LIYHLDV AMYPNIILTN+LQP SIV 
Sbjct: 515  VSEYNEEEGLESMKIQILKSLQENKGKIRRE-GLIYHLDVGAMYPNIILTNKLQPISIVD 573

Query: 618  DEVCTACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYYHLKKQIESEFVDGTNGHLSKSFL 677
            ++ C  CDF+     C +++EW  + E     R +   +KKQI+ E          K F+
Sbjct: 574  EDTCIRCDFSDELNECQKRMEWTMKVEYIAASREETERIKKQIKKE----------KGFV 623

Query: 678  DLPKMEQQSRLKDRLKKYCQKAYKRVLDKPVTELREAGICMRENSFYVDTVRSFRDRRYE 737
                 ++   LK R KKY ++ Y +   K    +R + +C RE  FYV+TVR FRD+RY 
Sbjct: 624  G----DRDEELKQRAKKYSKEIYGKAKRKENC-VRSSTVCQREVPFYVETVRKFRDQRYV 678

Query: 738  YKGLNKVWKGKLSEAKASGNSIKIQE----AQDMVVLYDSLQLAHKCILNSFYGYVMRKG 793
            YK L        SEA+ +  + + +E    A   VV+Y SLQ+AHKC+LNSFYGYVMRK 
Sbjct: 679  YKRL-------YSEAQKAFEAARTEEERKHAMKSVVVYSSLQIAHKCVLNSFYGYVMRKS 731

Query: 794  ARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLPGSFPENFTFKTKDL 853
            +RWYSMEMA +V   G  II+ AR ++EKIG  LELDTDGIWC++P S   ++T  +   
Sbjct: 732  SRWYSMEMAAIVCNVGGNIIKKAREIVEKIGISLELDTDGIWCLVPSSLISSYTLPS--- 788

Query: 854  KKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEFEVDGPYKAMILPA 913
             KK ++     +LN  V +  TN QYQ  VD     Y T  E SI FE+DGPYKAM+LPA
Sbjct: 789  GKKFSLLSS--LLNHFVCKKFTNHQYQEKVDG---RYITRMENSIFFEIDGPYKAMLLPA 843

Query: 914  SKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFLHGSTIEECYS 973
            S EE  L+KKRY + + +  +AELKGFE+KRRGEL++IK FQ ELF  FL GS + ECY 
Sbjct: 844  STEENRLLKKRYVIIDRNNRIAELKGFEVKRRGELEIIKKFQEELFLHFLDGSNLRECYE 903

Query: 974  AVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLADYGEQKSCAVTTARRLSDFL 1033
            ++A V   WLD+L ++G+ I D  +++ +SES +MSK    YG +KS    TA R+S+ L
Sbjct: 904  SLAEVCRYWLDILRSRGEYIDDDTILELLSESRSMSKGFDGYGGRKSSLTVTALRMSEVL 963

Query: 1034 GDTMVKDKGLRCQYIVACEPQGTPVSERAVPVAIFETDAEIMKFYLRKWCKTSSDVGIRS 1093
            G+ ++++K L+C+YI+A  P+   V+ERA+PV IF +D +  + +L +W + +    IRS
Sbjct: 964  GEGILEEK-LKCEYIIAAYPENRSVAERAIPVIIFRSDRK--EEFLGRWLQRNYSGDIRS 1020

Query: 1094 IVDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDW 1133
            I+DW YYK RL   IQ+++ +PA  Q+V NP+  V  P W
Sbjct: 1021 IIDWDYYKLRLECVIQRMVILPALSQRVGNPLKEVQVPGW 1060


>gi|449329858|gb|AGE96126.1| DNA polymerase epsilon [Encephalitozoon cuniculi]
          Length = 1799

 Score =  820 bits (2118), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 463/1114 (41%), Positives = 653/1114 (58%), Gaps = 64/1114 (5%)

Query: 24   EEELEAKLGYDLFSEGDKRLGWLLTFASSSLEDEDTRKVYSCIDLYFVSQDGSTFKSKYK 83
            +E LE + G+  + EG +R GWLL +A+ +L+D   +       LY +  +G  F  K  
Sbjct: 7    DELLEEQYGFVPYYEGRRREGWLLNYATVTLKDGRMK-----TKLYLIDGEGVEFLVKI- 60

Query: 84   FRPYFYAATKEKMEMDV-EAYLRRRYESQIADIEILEKEDLDLKNHLSGLHKSYLKISFD 142
              PYF +   +  + DV E YLR+RY  +I DIE   + D    NHLS     +LK+ F 
Sbjct: 61   --PYFPSFLVKASDYDVVEEYLRKRYSGEIHDIERTHRVDFKEYNHLSKEPGVFLKVRFK 118

Query: 143  TVQQLMDVKKDLLHVVERNQAKFDAAEAYESILTGKREQRPQDFLDCIVDLREYDVPYHI 202
            T     D  KD+  VV RN  K    + Y+    G R    +DF   IV + E+D+P  +
Sbjct: 119  TETGFGDAVKDVRRVVARN--KVQRRDEYDCFGEG-RGLNAEDF---IVSICEHDIPVEV 172

Query: 203  RFAIDNDVRCGQWYDVSISSTGPLLEKRVDLLQRAEVHVCAFDIETTKLPLKFPDADYDI 262
              A D  +RCG+WY    +    ++EK  + +   ++ + AFDIET+K PLKFP+AD D 
Sbjct: 173  CAANDLGIRCGRWYGFRYTGEMYVIEKS-ERIVFPDLRILAFDIETSKRPLKFPNADSDE 231

Query: 263  IMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNVNNEIELLRLWFAHMQ 322
            +MMIS   +G G LI+NR  V +DI   EY+PK + +  F   N ++E  +L      +Q
Sbjct: 232  VMMISVKTEGYGELIVNRGLVSKDIRGFEYSPKEDMQCTFCAVNESSEEGVLIRSVETIQ 291

Query: 323  EVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDKNQGECRAKFACHLDCFAWV 382
              +P +  T+NG  FD+PFLE R   +G  + E  GF   +      + F  HLDC+ WV
Sbjct: 292  RHRPHLITTFNGALFDFPFLEKRMLRYGISLRETAGFV--RRDEYYISPFIVHLDCYKWV 349

Query: 383  KRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQMMASYSVSDAVATYYLYM 442
            +RDSYLP GSQGLKAVTKAKLGY P EV+PEDMV  A   P+ M SYS SD+VATY+LY+
Sbjct: 350  RRDSYLPAGSQGLKAVTKAKLGYFPDEVDPEDMVGLAVSDPERMGSYSASDSVATYFLYI 409

Query: 443  TYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVICPNKHQSDPEKFYRNH 502
             YV P +FS+ ++IP+ P   L +GSGTLCE LL+ +A    V+ P K +    + +  H
Sbjct: 410  KYVQPHVFSMCSLIPLPPTSALCQGSGTLCEALLISEATAYGVLVPEKRRETKMQEHNGH 469

Query: 503  LLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQLLNNLDRDLQYAIKVEGKMDLES 562
            + ES TY+GGHVECL+SG+FRSD    F +D    + +   +D  L      EG  D+  
Sbjct: 470  IAESITYVGGHVECLKSGIFRSDFEYEFDVDKEFIDTVALKIDEMLSEYRGEEGFEDMRG 529

Query: 563  VSNYDEVKNAIMEKLLR-LQEE--PIREECPLIYHLDVAAMYPNIILTNRLQPPSIVTDE 619
                         K+LR LQE     R E  LIYHLDV AMYPNIILTN+LQP +IV ++
Sbjct: 530  -------------KVLRNLQENRGGFRRE-GLIYHLDVGAMYPNIILTNKLQPIAIVDED 575

Query: 620  VCTACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYYHLKKQIESEFVDGTNGHLSKSFLDL 679
             C  CDF+     C +++EW  + E     R +   ++KQI  E          K F   
Sbjct: 576  ACIRCDFSDESNGCKKRMEWTLKVEYIPAGREETERIRKQIRRE----------KGFAG- 624

Query: 680  PKMEQQSRLKDRLKKYCQKAYKRVLDKPVTELREAGICMRENSFYVDTVRSFRDRRYEYK 739
               ++   L+ R ++Y +  Y+R   +    +R + +C RE  FYV+TVR FRD+RY YK
Sbjct: 625  ---DENEELRQRARRYSKDTYRRAKVRESC-IRSSTVCQREIPFYVETVRKFRDQRYVYK 680

Query: 740  GLNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHKCILNSFYGYVMRKGARWYSM 799
             L+   +     A +       + A   VV+Y SLQ+AHKC+LNSFYGYVMRK +RWYSM
Sbjct: 681  KLHSQAQKAFESASSDEER---KHAMKSVVVYSSLQIAHKCVLNSFYGYVMRKSSRWYSM 737

Query: 800  EMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLPGSFPENFTFKTKDLKKKLTI 859
            EMA +V   G  II+ A+ ++EKIG  LELDTDGIWC++P S   ++T     L      
Sbjct: 738  EMAAIVCNVGGNIIKRAKEVVEKIGISLELDTDGIWCIVPSSLISSYT-----LPSGRRF 792

Query: 860  SYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEFEVDGPYKAMILPASKEEGI 919
            S+   +LN  V +  TN QYQ  VD     Y   +E SI FE+DGPY+AM+LP+S EE  
Sbjct: 793  SFLSSLLNHFVCKEFTNWQYQERVD---GKYVMRAENSIFFEIDGPYRAMLLPSSTEESK 849

Query: 920  LIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFLHGSTIEECYSAVAAVA 979
            L+KKRYA+ + +  +AELKGFEIKRRGEL+++K FQ ELF  FL GS +EECY ++A V 
Sbjct: 850  LLKKRYAIIDSNNRIAELKGFEIKRRGELEIVKKFQEELFLHFLDGSNLEECYESLAGVC 909

Query: 980  NRWLDLLDNQGKDIADSELIDYISESSTMSKSLADYGEQKSCAVTTARRLSDFLGDTMVK 1039
              WLD+L ++G+ + D  +++ +SES +MSK   +Y  +KS    TA R+S+ LG+ +++
Sbjct: 910  RYWLDILKSRGEYLDDDTILELLSESRSMSKGFGEYRGRKSNLTVTALRMSELLGEGILE 969

Query: 1040 DKGLRCQYIVACEPQGTPVSERAVPVAIFETDAEIMKFYLRKWCKTSSDVGIRSIVDWSY 1099
            +K L+C+YIVA  P+   V+ERA+PV +F ++ +  + +LR+W        IR+I+DW Y
Sbjct: 970  EK-LKCEYIVAVYPENGSVAERAIPVVVFRSEQK--EEFLRRWMGRDYLGDIRAIIDWDY 1026

Query: 1100 YKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDW 1133
            Y+QRL   +Q+++ +PA  Q V NP+  +  P W
Sbjct: 1027 YRQRLECVVQRMVILPALSQGVRNPLREIQVPVW 1060



 Score = 44.3 bits (103), Expect = 0.72,   Method: Compositional matrix adjust.
 Identities = 40/179 (22%), Positives = 70/179 (39%), Gaps = 36/179 (20%)

Query: 1811 PLEFIKHVCAAFALDQNVQHDVLVMRKNLLKYVRVREF----APEAEFRDPCPSFILPNV 1866
            PLE  + +    +L Q+ Q     +  N  + + + EF      E +    CPS  + NV
Sbjct: 1629 PLESSRIILRLLSLRQDAQ----TLMSNCYRLLHLSEFEEEKGTEMQLDIGCPSCGMENV 1684

Query: 1867 ICSYCNDCRDLDLCRDMALLAQDWHCAMPQCGQPYDREVMENALLQIVRQRERLYHLQDL 1926
            + S C                        +C +PY ++ +    +   +    L   +DL
Sbjct: 1685 LRSRC-----------------------IKCYKPYPKDAVLEVCMAHAKHLLWLELSRDL 1721

Query: 1927 VCIRCNQVKAAHLAEQCACAGSFRCK---EDASDFR--SKMQIFLNIANRQGFQLLQEC 1980
             C+RC +V    L++ C C G+F+ +   ++  + R  +   IF     R     LQEC
Sbjct: 1722 YCVRCGRVNETKLSDFCKCGGAFKKRGYMKELEELRKVASSPIFDEFCRRISKHFLQEC 1780


>gi|147791988|emb|CAN64257.1| hypothetical protein VITISV_040149 [Vitis vinifera]
          Length = 1251

 Score =  808 bits (2088), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 390/444 (87%), Positives = 413/444 (93%), Gaps = 8/444 (1%)

Query: 611  QPPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYYHLKKQIESEFVDGTNG 670
            +P SIV+DE+CTACDFNRPGK CLRKLEWVWRGE FM K+SDYYHLK+QIESE VDG + 
Sbjct: 82   EPSSIVSDEICTACDFNRPGKNCLRKLEWVWRGEAFMAKKSDYYHLKRQIESELVDGGDS 141

Query: 671  HLSKSFLDLPKMEQQSRLKDRLKKYCQKAYKRVLDKPVTELREAGICMRENSFYVDTVRS 730
              SKSF+DLPK EQQ +LK+RLKKYCQKAYKRVLDKP TELREAGICMRENSFY+DTVRS
Sbjct: 142  RFSKSFIDLPKTEQQLKLKERLKKYCQKAYKRVLDKPATELREAGICMRENSFYIDTVRS 201

Query: 731  FRDRRYEYKGLNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHKCILNSFYGYVM 790
            FRDRRYEYKGLNKVWKGKLSEAKASGNSI+IQEAQDMVVLYDSLQLAHKCILNSFYGYVM
Sbjct: 202  FRDRRYEYKGLNKVWKGKLSEAKASGNSIRIQEAQDMVVLYDSLQLAHKCILNSFYGYVM 261

Query: 791  RKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLPGSFPENFTFKT 850
            RKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIG+PLELDTD    +    F        
Sbjct: 262  RKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGRPLELDTDDXDHICGTHF-------- 313

Query: 851  KDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEFEVDGPYKAMI 910
            +DLKKKLTISYPCVMLNVDVARNNTNDQYQTL+DP++KTY THSECSIEFEVDGPYKAMI
Sbjct: 314  RDLKKKLTISYPCVMLNVDVARNNTNDQYQTLIDPINKTYATHSECSIEFEVDGPYKAMI 373

Query: 911  LPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFLHGSTIEE 970
            LPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFLHGS +EE
Sbjct: 374  LPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFLHGSXLEE 433

Query: 971  CYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLADYGEQKSCAVTTARRLS 1030
            CY+AVA+VANRWLDLLDNQGKDI DSEL+DYISESSTMSKSLADYGEQKSCAVTTARRL+
Sbjct: 434  CYAAVASVANRWLDLLDNQGKDIVDSELLDYISESSTMSKSLADYGEQKSCAVTTARRLA 493

Query: 1031 DFLGDTMVKDKGLRCQYIVACEPQ 1054
            DFLGDTMVKDKGLRCQYIVACEP+
Sbjct: 494  DFLGDTMVKDKGLRCQYIVACEPR 517


>gi|401827807|ref|XP_003888196.1| DNA polymerase epsilon [Encephalitozoon hellem ATCC 50504]
 gi|392999396|gb|AFM99215.1| DNA polymerase epsilon [Encephalitozoon hellem ATCC 50504]
          Length = 1772

 Score =  808 bits (2086), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 452/1131 (39%), Positives = 670/1131 (59%), Gaps = 60/1131 (5%)

Query: 24   EEELEAKLGYDLFSEGDKRLGWLLTFASSSLEDEDTRKVYSCIDLYFVSQDGSTFKSKYK 83
            +E LE + G+  + E  +R GW+L +   +L D   R       LY + ++G  F  K  
Sbjct: 3    DELLEEQYGFVSYYESRRREGWVLNYTVVTLRDGRMR-----TKLYLIDEEGREFLVKI- 56

Query: 84   FRPYFYAATKEKMEMD-VEAYLRRRYESQIADIEILEKEDLDLKNHLSGLHKSYLKISFD 142
              PYF +   +  + D VE YLR++Y  +I D+E  ++ D   KNHL+    ++LKI F 
Sbjct: 57   --PYFPSLLVKASDYDIVEEYLRKKYAGEIQDMERTQRIDFKEKNHLNKEPGTFLKIRFR 114

Query: 143  TVQQLMDVKKDLLHVVERNQAKFDAAEAYESILTGKREQRPQDFLDCIVDLREYDVPYHI 202
            T    ++  K++  +  RN+ +   +  Y+       E R  +    I  + E+D+P  +
Sbjct: 115  TEPGFVEALKEIKRIAARNRVQ--KSNEYDCF----GEDRAFNAEGLIESVHEHDIPAEV 168

Query: 203  RFAIDNDVRCGQWYDVSISSTGPLLEKRVDLLQRAEVHVCAFDIETTKLPLKFPDADYDI 262
              A D  +RCG+WY    +    ++EK   ++   ++ + AFDIET+K PLKFP+ + D 
Sbjct: 169  STANDLRIRCGKWYGFYYTGETYVIEKSEKIVF-PDLRILAFDIETSKKPLKFPNPESDE 227

Query: 263  IMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNVNNEIELLRLWFAHMQ 322
            +MMIS   +  G LI+NR+ V +DI   EY PK + +  F+V N ++E  +L  +   +Q
Sbjct: 228  VMMISAKTECGGELIVNRKLVSKDIRRFEYNPKEDMQCVFEVVNEDDEEGVLIRFIEMIQ 287

Query: 323  EVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDKNQGECRAKFACHLDCFAWV 382
              +P +  T+NG  FD+PFLE R A +G  + E  GF   K++    A F  HLDC+ WV
Sbjct: 288  RHRPHLVTTFNGALFDFPFLEKRMARYGISLRETAGF-VQKDEYYISA-FIVHLDCYKWV 345

Query: 383  KRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQMMASYSVSDAVATYYLYM 442
            KRDSYLP GSQGLKAVTKAKLGY P E++PEDMV  A   P  MASYSVSD+VATY+LY 
Sbjct: 346  KRDSYLPAGSQGLKAVTKAKLGYFPDEIDPEDMVGLAVSDPDKMASYSVSDSVATYFLYT 405

Query: 443  TYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVICPNKHQSDPEKFYRNH 502
             YV P IFS+ ++IP+ P   L +GSGTLCE LL+ +A +  VI P K +    + +  H
Sbjct: 406  KYVQPHIFSMCSLIPLPPASALCQGSGTLCEALLISEASEYKVIIPEKRRERKIQEHNGH 465

Query: 503  LLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQLLNNLDRDLQYAIKVEGKMDLES 562
            + ES TY+GG+VECL+SG+FRSD    F++D    ++++  LD  +      +G  D++S
Sbjct: 466  IAESITYVGGYVECLKSGIFRSDFEYDFEMDEGFIDEIVLKLDEVISEYSGEKGFEDMKS 525

Query: 563  VSNYDEVKNAIMEKLLRLQEEPIREECPLIYHLDVAAMYPNIILTNRLQPPSIVTDEVCT 622
                 ++  ++ E   R++ E       LIYHLDV AMYPNIILTN+LQP SIV ++ C 
Sbjct: 526  -----QILKSLQENRGRIRRE------GLIYHLDVGAMYPNIILTNKLQPVSIVDEDTCI 574

Query: 623  ACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYYHLKKQIESEFVDGTNGHLSKSFLDLPKM 682
             CDF+     C +++EW  + E     R +   +++QI+ E          K F+     
Sbjct: 575  RCDFSDELNGCKKRMEWTLKVEYIAANRGETERIRRQIKKE----------KGFVG---- 620

Query: 683  EQQSRLKDRLKKYCQKAYKRVLDKPVTELREAGICMRENSFYVDTVRSFRDRRYEYKGLN 742
            ++   L+ R+K+Y +  Y++   K     R + +C RE  FYV+TVR FRD+RY YK   
Sbjct: 621  DKDEELRQRVKRYSKGIYRKAKRKESC-TRRSTVCQREVPFYVETVRKFRDQRYVYK--- 676

Query: 743  KVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMA 802
            +++       +A+    + + A   V++Y SLQ+AHKC+LNSFYGYVMRK +RWYSMEMA
Sbjct: 677  RLYFEAQKAFEAAETEEEKKHAMKSVIVYSSLQVAHKCVLNSFYGYVMRKSSRWYSMEMA 736

Query: 803  GVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLPGSFPENFTFKTKDLKKKLTISYP 862
             +V   G  II+ AR ++EKIG  LE+DTDGIWC++P S   ++      L      S+ 
Sbjct: 737  AIVCNVGGNIIKKAREVVEKIGISLEMDTDGIWCIVPSSLVSSYV-----LPSGRKFSFL 791

Query: 863  CVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEFEVDGPYKAMILPASKEEGILIK 922
              +LN  V +  TN QYQ   + V   Y T +E SI FE+DGPY AM+LPAS EE  L+K
Sbjct: 792  SSILNHFVCKKFTNYQYQ---ERVGGEYITRAENSIFFEIDGPYNAMLLPASTEENKLLK 848

Query: 923  KRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFLHGSTIEECYSAVAAVANRW 982
            KRY + + +  +AELKGFE+KRRGEL++IK FQ ELF  FL G  ++ECY ++A V   W
Sbjct: 849  KRYVIIDGNNRIAELKGFEVKRRGELEIIKKFQEELFLHFLDGRNLKECYESLAGVCRYW 908

Query: 983  LDLLDNQGKDIADSELIDYISESSTMSKSLADYGEQKSCAVTTARRLSDFLGDTMVKDKG 1042
            LD+L ++G+ + D  +++ +SES +MSK L DY  +KS    TA R+S+ LG+ ++++K 
Sbjct: 909  LDMLKSKGEYLDDDVILELLSESRSMSKGLGDYRGRKSNLTVTALRMSEVLGEGILEEK- 967

Query: 1043 LRCQYIVACEPQGTPVSERAVPVAIFETDAEIMKFYLRKWCKTSSDVGIRSIVDWSYYKQ 1102
            L+C+YI+A  P+   V+ERA+PV  F +D +  + +L++W +      IR+I+DW YY+ 
Sbjct: 968  LKCEYIIAAYPENWSVAERAIPVVTFRSDRK--EEFLKRWLQRDYSGDIRAIIDWDYYRL 1025

Query: 1103 RLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLYKKVREKEDKFRQRKLVDI 1153
            RL   +Q+++ +PA  Q + NP+  V  P W   K + +   F  +K  DI
Sbjct: 1026 RLECIVQRMVILPALFQGIKNPLKEVEVPKW--AKTKSELKGFSIKKTNDI 1074


>gi|303391142|ref|XP_003073801.1| DNA polymerase type-B epsilon [Encephalitozoon intestinalis ATCC
            50506]
 gi|303302949|gb|ADM12441.1| DNA polymerase type-B epsilon [Encephalitozoon intestinalis ATCC
            50506]
          Length = 1776

 Score =  808 bits (2086), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 467/1171 (39%), Positives = 684/1171 (58%), Gaps = 73/1171 (6%)

Query: 24   EEELEAKLGYDLFSEGDKRLGWLLTFASSSLEDEDTRKVYSCIDLYFVSQDGSTFKSKYK 83
            +E LE + G+    E  +R GW+L + ++  +D           LY +    + F  K  
Sbjct: 3    DELLEEQYGFISHHESRRREGWVLNYITTVFKDGRMEA-----KLYLIDDKRAEFLVKI- 56

Query: 84   FRPYFYAATKEKMEMD-VEAYLRRRYESQIADIEILEKEDLDLKNHLSGLHKSYLKISFD 142
              PYF +   +  + D VE YLRR+Y ++I  +E + + D +  NHL+     +L++ F 
Sbjct: 57   --PYFPSLLLKASDYDSVEEYLRRKYAAEIYSMERVHRIDFNEYNHLNKDPGVFLEVRFR 114

Query: 143  TVQQLMDVKKDLLHVVERNQAKFDAAEAYESILTGK-REQRPQDFLDCIVDLREYDVPYH 201
            T        KD   +V RN  K      Y+    GK R    ++ ++ I    EYD+P  
Sbjct: 115  TESGFSTAVKDFKKIVARN--KVQKNNEYDCF--GKDRTLCAEELMEGIF---EYDIPVE 167

Query: 202  IRFAIDNDVRCGQWYDVSISSTGPLLEKRVDLLQRAEVHVCAFDIETTKLPLKFPDADYD 261
            +  A +  +RCG+WY    +    ++EK  + +   ++ + AFDIET K PLKFP+ DYD
Sbjct: 168  VCTANNLKIRCGKWYTFYYTGETYVIEKS-ERVVFPDLRILAFDIETFKKPLKFPNPDYD 226

Query: 262  IIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNVNNEIELLRLWFAHM 321
             +MMIS   + +G LI+NR  V +DI   EY P+ + E  F V+N  +E  +L  +   +
Sbjct: 227  EVMMISVKTECRGELIVNRRLVSKDIRKFEYNPREDMECVFDVSNEGDEEGVLIRFVELI 286

Query: 322  QEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDKNQGECRAKFACHLDCFAW 381
            Q+ KP +  T+NG  FD+PFLE R  ++G  + E  GF          + F  HLDC+ W
Sbjct: 287  QKHKPHLITTFNGALFDFPFLEKRMKNYGISLRETTGFTLKDEY--YISPFIVHLDCYKW 344

Query: 382  VKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQMMASYSVSDAVATYYLY 441
            VKRDSYLP GSQGLK VTK KLGY P E++PEDMVR A   P  MASYSVSD+VATY+LY
Sbjct: 345  VKRDSYLPAGSQGLKEVTKVKLGYFPDEIDPEDMVRLAMSDPDKMASYSVSDSVATYFLY 404

Query: 442  MTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVICPNKHQSDPEKFYRN 501
              YV P +FSL +++P+SP   L +GSGTLCE LL+ +A +  V+ P + +    + +  
Sbjct: 405  TKYVQPHVFSLCSLVPLSPTSALCQGSGTLCEALLVSEAIEYGVLIPERRRESKTREHNG 464

Query: 502  HLLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQLLNNLDRDLQYAIKVEGKMDLE 561
            H+ ES TY+GG+VECL SG+FRSDL   F +      +++++LD ++ Y  K EG     
Sbjct: 465  HIAESITYVGGYVECLRSGIFRSDLEHEFNISKEFIGEVVSSLD-EILYEYKEEG----- 518

Query: 562  SVSNYDEVKNAIMEKLLRLQEEP--IREECPLIYHLDVAAMYPNIILTNRLQPPSIVTDE 619
                ++E+K  I   L  LQE    +R+E  LIYHLDV AMYPNIILTN+LQP SIV +E
Sbjct: 519  ---GFEEMKAQI---LANLQENKGRLRKE-GLIYHLDVGAMYPNIILTNKLQPVSIVNEE 571

Query: 620  VCTACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYYHLKKQIESEFVDGTNGHLSKSFLDL 679
            +C  CDF+     C +++EW  + E     + +   +++Q+E E          K+F   
Sbjct: 572  ICIRCDFSDESNNCKKRMEWSLKVEYIPAGKRETEMIRRQVEKE----------KNF--- 618

Query: 680  PKMEQQSRLKDRLKKYCQKAYKRVLDKPVTELREAGICMRENSFYVDTVRSFRDRRYEYK 739
             +  ++  +K R+++Y +  Y +  +K +   R + +C RE  FYV+TVR FRD+RY YK
Sbjct: 619  -EGNEEEEVKKRVRRYSKSMYGKKREKKIC-TRSSTVCQREIPFYVETVRKFRDQRYVYK 676

Query: 740  GLNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHKCILNSFYGYVMRKGARWYSM 799
             L    +    EA         + A   VV+Y SLQ+AHKC+LNSFYGYVMRK +RWYSM
Sbjct: 677  RLQAQAQKAAEEATTDEER---KYAMKSVVVYSSLQVAHKCVLNSFYGYVMRKSSRWYSM 733

Query: 800  EMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLPGSFPENFTFKTKDLKKKLTI 859
            EMA +V   G  II+ AR ++EKIG  LELDTDGIWC++P S   ++   +    KK ++
Sbjct: 734  EMAAIVCNVGGNIIKKAREIVEKIGISLELDTDGIWCIVPSSLVSSYVLPS---GKKFSL 790

Query: 860  SYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEFEVDGPYKAMILPASKEEGI 919
                 +LN  V +  TN+QYQ  +D     Y T SE SI FE+DGPY+AM+LP S EE  
Sbjct: 791  LSG--LLNHFVCKKFTNNQYQEKIDG---EYATRSENSIFFEIDGPYRAMLLPTSTEESK 845

Query: 920  LIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFLHGSTIEECYSAVAAVA 979
            L+KKRYA+ +D+  +AELKGFE+KRRGEL++ K FQ ELF  FL GS + ECY ++A V 
Sbjct: 846  LLKKRYAIIDDNNKIAELKGFEMKRRGELQITKKFQEELFLHFLDGSNLNECYESLAEVC 905

Query: 980  NRWLDLLDNQGKDIADSELIDYISESSTMSKSLADYGEQKSCAVTTARRLSDFLGDTMVK 1039
              WLD+L ++G+ + D  +++ +SES +MSK   +Y  +KS    TA R+S+ LG+ +++
Sbjct: 906  RYWLDILKSKGEYLDDDTILELLSESRSMSKGFGEYRGRKSNLTVTAVRMSEVLGEGILE 965

Query: 1040 DKGLRCQYIVACEPQGTPVSERAVPVAIFETDAEIMKFYLRKWCKTSSDVGIRSIVDWSY 1099
            +K L+C+YIVA  P+   V+ERA+PV +F ++ +  + +LRKW +      IR+++DW Y
Sbjct: 966  EK-LKCEYIVAAYPENKSVAERAIPVVVFRSEQK--EEFLRKWLERDYSGDIRAVIDWEY 1022

Query: 1100 YKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLYKKVREKEDKFRQRKLVDIFSSLKK 1159
            Y+ RL   IQ+++ +PA  Q + NP+  V  P+W   K + +   F  R + DI     +
Sbjct: 1023 YRVRLECVIQRMVILPALSQGIKNPLSEVGIPEW--AKAKTQLRGFDLRNVDDI-----E 1075

Query: 1160 DDFLNKTCNAETNLMDENVEDLEDFPKKRRN 1190
            D F     + +T    E  +  EDF + + N
Sbjct: 1076 DAFCKARLSKDTEAGREKCK--EDFEEDKEN 1104


>gi|297693518|ref|XP_002824066.1| PREDICTED: LOW QUALITY PROTEIN: DNA polymerase epsilon catalytic
           subunit A [Pongo abelii]
          Length = 2056

 Score =  807 bits (2084), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 404/774 (52%), Positives = 536/774 (69%), Gaps = 39/774 (5%)

Query: 3   RRRWD--------RQDGRRTKKQKLIR----SAEEELEAKLGYDLFSEGDKRLGWLLTFA 50
           RRR D        R DG  +    L R       ++++ + G++   E  ++ GWL+   
Sbjct: 8   RRRADPGADGEASRDDGATSSVSALKRLERSQWTDKMDLRFGFERLKEPGEKTGWLINMH 67

Query: 51  SSSLEDEDTRKVYSCIDLYFVSQDGSTFKSKYKFRPYFYAATKEKMEMDVEAYLRRRYES 110
            + + DED R V S +D YF+  DGS FK    ++PYFY AT++  E +V ++L ++++ 
Sbjct: 68  PTEILDEDKRLV-SAVDYYFIQDDGSRFKVALPYKPYFYIATRKGCEREVSSFLSKKFQG 126

Query: 111 QIADIEILEKEDLDLKNHLSGLHKSYLKISFDTVQQLMDVKKDLLHVVERNQAKFDAAEA 170
           +IA +E + KEDLDL NHL GL ++Y+K+SF TV+ L+ V+K++   V++N+ +  A++A
Sbjct: 127 KIAKVETVPKEDLDLPNHLVGLKRNYIKLSFHTVEDLVKVRKEISPAVKKNREQDHASDA 186

Query: 171 YESILTG------------KREQRPQDFLDCIVDLREYDVPYHIRFAIDNDVRCGQWYDV 218
           Y ++L+             +  ++  D LD IVD+REYDVPYHIR +ID  +    WY+V
Sbjct: 187 YTALLSSVLQRGGVITDEEETSKKIADQLDNIVDMREYDVPYHIRLSIDLKIHVAHWYNV 246

Query: 219 SISSTGPLLE--KRVDLLQRAEVHVCAFDIETTKLPLKFPDADYDIIMMISYMLDGQGYL 276
                   +E  +R DL++R +  V AFDIETTKLPLKFPDA+ D IMMISYM+DGQGYL
Sbjct: 247 RYRGNAFPVEITRRDDLVERPDPVVLAFDIETTKLPLKFPDAETDQIMMISYMIDGQGYL 306

Query: 277 IINRECVGEDIEDLEYTPKPEFEGYFKVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDY 336
           I NRE V EDIED E+TPKPE+EG F V N  +E  L++ WF H+QE KP I VTYNGD+
Sbjct: 307 ITNREIVSEDIEDFEFTPKPEYEGPFCVFNEPDEAHLIQRWFEHVQETKPTIMVTYNGDF 366

Query: 337 FDWPFLETRAAHHGFKMSEELGFQCDKNQGECRAKFACHLDCFAWVKRDSYLPQGSQGLK 396
           FDWPF+E RAA HG  M +E+GFQ D +QGE +A    H+DC  WVKRDSYLP GS  LK
Sbjct: 367 FDWPFVEARAAVHGLSMQQEIGFQKD-SQGEYKAPQCIHMDCLRWVKRDSYLPVGSHNLK 425

Query: 397 AVTKAKLGYDPLEVNPEDMVRFAKEKPQMMASYSVSDAVATYYLYMTYVHPFIFSLATII 456
           A  KAKLGYDP+E++PEDM R A E+PQ +A+YSVSDAVATYYLYM YVHPFIF+L TII
Sbjct: 426 AAAKAKLGYDPVELDPEDMCRMATEQPQTLATYSVSDAVATYYLYMKYVHPFIFALCTII 485

Query: 457 PMSPDEVLRKGSGTLCEMLLMVQAYKANVICPNKHQSDPEKFYRN-HLLESETYIGGHVE 515
           PM PDEVLRKGSGTLCE LLMVQA+ AN+I PNK + +  K   + H+L+SETY+GGHVE
Sbjct: 486 PMEPDEVLRKGSGTLCEALLMVQAFHANIIFPNKQEQEFNKLTDDGHVLDSETYVGGHVE 545

Query: 516 CLESGVFRSDLPTSFKLDPSAYEQLLNNLDRDLQYAIKVEGKMDLESVSNYDEVKNAIME 575
            LESGVFRSD+P  F+++P+A++ LL  +++ L++AI+ E K+ +E VSN++EV + I  
Sbjct: 546 ALESGVFRSDIPCRFRMNPAAFDFLLQRVEKTLRHAIEEEEKVPVEQVSNFEEVCDEIKS 605

Query: 576 KLLRLQEEPIREECPLIYHLDVAAMYPNIILTNRLQPPSIVTDEVCTACDFNRPGKTCLR 635
           KL  L++ P R ECPLIYHLDV AMYPNIILTNRLQP ++V +  C ACDFN+PG  C R
Sbjct: 606 KLASLKDIPSRIECPLIYHLDVGAMYPNIILTNRLQPSAMVDEATCAACDFNKPGANCQR 665

Query: 636 KLEWVWRGEIFMGKRSDYYHLKKQIESE-----FVDGTNGHLSKSFLDLPKMEQQSRLKD 690
           K+ W WRGE     RS+Y+ ++ Q+ESE     F +G     +++F +L + EQ    K 
Sbjct: 666 KMAWQWRGEFMPASRSEYHRIQHQLESEKFPPLFPEGP----ARAFHELSREEQAKYEKR 721

Query: 691 RLKKYCQKAYKRVLDKPVTELREAGICMRENSFYVDTVRSFRDRRYEYKGLNKV 744
           RL  YC+KAYK++    V E R   IC RENSFYVDTVR+FRDRRYE+KGL+K+
Sbjct: 722 RLADYCRKAYKKIHITKVEE-RLTTICQRENSFYVDTVRAFRDRRYEFKGLHKL 774



 Score =  317 bits (811), Expect = 5e-83,   Method: Compositional matrix adjust.
 Identities = 192/610 (31%), Positives = 307/610 (50%), Gaps = 72/610 (11%)

Query: 1442 LARYAHILWISDDGVPDLGGTSEEDECFADEVHQPV---LTYPGAYRKVSVELKIHHLSV 1498
            L R+ H+LW+S    PDLGG   +D C   E        +   G Y  V VEL + +L+V
Sbjct: 1447 LQRHNHLLWLSPTARPDLGGKEADDNCLVMEFDDQATVEINSSGCYSTVCVELDLQNLAV 1506

Query: 1499 NALLKSNQVNEMEGGGLFGFDQD----------MNSGPYNNELCGFDETTSSAPAFRVVK 1548
            N +L+S+ VN+MEG    G   D          +  G   +    +DET   +  FR++K
Sbjct: 1507 NTILQSHHVNDMEGADSMGISFDVIQQASLEDMITGGQAASAPASYDETALCSNTFRILK 1566

Query: 1549 QLIQRCLTDAVTSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEF 1608
             ++   + +     N++AD  + H YRWL SP S LHDP LHR LH +M+K+F  L+AEF
Sbjct: 1567 SMVVGWVKEITQYHNIYADNQVMHFYRWLRSPSSLLHDPALHRTLHNMMKKLFLQLIAEF 1626

Query: 1609 RKLGATIIFANFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLF 1668
            ++LG+++I+ANF+++I+ T K  +  A AY + + +++ ++E+F  + +     W  LL+
Sbjct: 1627 KRLGSSVIYANFNRIILCTKKRRVEDAIAYVEYVTRSIHSKEIFHSLTISFSRCWEFLLW 1686

Query: 1669 MDQYNYGGIPARADESLD---DDSQV-------------------------------DIV 1694
            MD  NYGGI  +    +     DSQ                                D++
Sbjct: 1687 MDPSNYGGIKGKVSSRIHCGLQDSQKAGGADDEQENEDDEEERDGEEEEEAEESNMEDLL 1746

Query: 1695 -SSWNIAEYLPK--EIQDHFVLVVSEFMYIPWKHAQKLAASRAS------LQEGSSCTPS 1745
             ++WNI ++LP+    Q++F+++VS ++   + H  K    R++       + G+S    
Sbjct: 1747 ENNWNILQFLPQAASCQNYFLMIVSAYIVAVY-HCMKDGLRRSAPGSTPVRRRGASQLSQ 1805

Query: 1746 ITVAAAENFESHIV---QYVKGEISSYFTGKLLSIVRDAIHHMKKMNNDQHNSPGVMQTA 1802
                AA      I     YV  E++  F      I +         N+ + +    +   
Sbjct: 1806 EAEGAAGALPGMITFSQDYVANELTQSFFNITQKIQKKVT---GSRNSTELSEMFPVLPG 1862

Query: 1803 ANIHKVDAPLEFIKHVCAAFALDQNVQHDVLVMRKNLLKYVRVREFAPEAEFRDPCPSFI 1862
            +++   +  LEFIK+VC   +LD N+ + V  + ++LL+ V V EF+ EA+FRDPC S++
Sbjct: 1863 SHLLLNNPALEFIKYVCKVLSLDTNITNQVNKLNRDLLRLVDVGEFSEEAQFRDPCRSYV 1922

Query: 1863 LPNVICSYCNDCRDLDLCRDM------ALLAQDWHCAMPQCGQPYDREVMENALLQIVRQ 1916
            LP VIC  CN CRDLDLC+D       A+L Q W C+   C  PYD   +E  L++++++
Sbjct: 1923 LPEVICRSCNFCRDLDLCKDSSFSEDGAVLPQ-WLCS--NCQAPYDSSAIEMTLVEVLQK 1979

Query: 1917 RERLYHLQDLVCIRCNQVKAAHLAEQCACAGSFRCKEDASDFRSKMQIFLNIANRQGFQL 1976
            +   + LQDLVC++C  VK   +   C+CAG F        F  ++ IF NIA       
Sbjct: 1980 KLMAFTLQDLVCLKCRGVKETSMPVYCSCAGDFALTIHTQVFMEQIGIFRNIAQHYSMSY 2039

Query: 1977 LQECTSWILE 1986
            L E   W+L+
Sbjct: 2040 LLETLEWLLQ 2049



 Score =  293 bits (749), Expect = 8e-76,   Method: Compositional matrix adjust.
 Identities = 168/435 (38%), Positives = 257/435 (59%), Gaps = 42/435 (9%)

Query: 990  GKDIADSELIDYISESSTMSKSLADYGEQKSCAVTTARRLSDFLGDTMVKDKGLRCQYIV 1049
              ++ DSEL + ISE+ +MS+ L DYGEQKS +++TA+RL++FLGD MVKD GL C+YI+
Sbjct: 791  AANMPDSELFELISENRSMSRKLEDYGEQKSTSISTAKRLAEFLGDQMVKDAGLSCRYII 850

Query: 1050 ACEPQGTPVSERAVPVAIFETDAEIMKFYLRKWCKTSS--DVGIRSIVDWSYYKQRLSSA 1107
            + +P+G+PV+ERA+P+AIF+ +  + K +LRKW K+SS  D  IR+I+DW YY +RL SA
Sbjct: 851  SRKPEGSPVTERAIPLAIFQAEPTVRKHFLRKWLKSSSLQDFDIRAILDWDYYIERLGSA 910

Query: 1108 IQKIITIPAAMQKVSNPVPRVVHPDWLYKKVREKEDKFRQRKLVDIFSSLKKDDFLNKTC 1167
            IQKIITIPAA+Q+V NPVPRV HPDWL+KK+ EK D ++Q+K+ ++F+   +      T 
Sbjct: 911  IQKIITIPAALQQVKNPVPRVKHPDWLHKKLLEKNDVYKQKKISELFTLEGRRQV--TTA 968

Query: 1168 NAETNLMDENVEDLEDFPKKRRNSVNGPRPIVRCFEVNNEQKTVKTTDQVDSLRQQLEPS 1227
             A  +    +  D+EDF       V  P P      V  ++K V    Q +S  Q L P+
Sbjct: 969  EASEDSPRPSAPDMEDF-----GLVKLPHPAA---PVTVKRKRVLWESQEES--QDLTPT 1018

Query: 1228 ----EVSDQQPSSQNAIDTENIDRIVDYKGWLELKKRKW----KDNLDRRKKQKLGSLRA 1279
                E+  Q P    A+ T   + +V    WL   K+KW    +  L RRK+Q+L S   
Sbjct: 1019 VPWQEILGQPP----ALGTTQEEWLV----WLRFHKKKWQLQARQRLARRKRQRLESAEG 1070

Query: 1280 SHQANGVSESLGDMINHKEAQRRTGVGSYFRRQETAMTRCHWQIIQLVPSSQSGVFLAWV 1339
              +   + +              TG+GS+ RR   ++    WQI+Q+  +SQ+G+F  W 
Sbjct: 1071 VLRPGAIRDGPA-----------TGLGSFLRRTARSILDLPWQIVQISETSQAGLFRLWA 1119

Query: 1340 VVEGIMVRIPITVPRLFYLNSKDPIVEKFPG-RRVNKTLPHGRRSFNLIEVMIDEDQFRK 1398
            +V   +  I +++PR+FY+N +    E+    R+VN+ LP     +NL E  + ED +++
Sbjct: 1120 LVGSDLHCIRLSIPRVFYVNQRVAKAEEGTSYRKVNRVLPRSNVVYNLYEYSVPEDMYQE 1179

Query: 1399 ESKKLAALLADPEVE 1413
               ++ A L+ P++E
Sbjct: 1180 HINEINAELSAPDIE 1194


>gi|221504343|gb|EEE30018.1| DNA polymerase epsilon catalytic subunit, putative [Toxoplasma gondii
            VEG]
          Length = 3059

 Score =  793 bits (2048), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 535/1587 (33%), Positives = 803/1587 (50%), Gaps = 232/1587 (14%)

Query: 27   LEAKLGYDLFSEGDKRLGWLLTFASSSLE---DEDTRKVYSCIDLYFVSQDGSTFKSKYK 83
            LE +L   ++S    + G+L        E    ED ++  S + LYFVS+ G+++++   
Sbjct: 207  LERELRVSVWSGVGTKRGYLYNMVQMQAEVATSEDKKETVSGLHLYFVSETGASWRTSLL 266

Query: 84   FRPYFYAATKEKMEMDVEAYLRRRYESQIADIEI-LEK---EDLDLKNHLSGLH------ 133
            +RPYFY + +       E  L+      + D ++  EK   EDL    HL  L       
Sbjct: 267  YRPYFYISLRRTRASYFEQ-LKEALMDLLGDADVRFEKTFREDLSDPLHLRTLLSGGPAP 325

Query: 134  --------KSYLKISFDTVQQLMDVKKDLLHVV--------------------ERNQAKF 165
                    + +++ISF  V+QL+D + +L  +V                    E+ +AK 
Sbjct: 326  DEGTNSSLREFVQISFANVKQLVDARDELRKIVRRNQERRARQREEERLASFAEKTKAKD 385

Query: 166  DAAEAY---------------------------------------ESILTGKREQRPQDF 186
             A  +Y                                       E     +++Q+ +D 
Sbjct: 386  GAFASYSHARFAAPDDINFADIAFSNSCQADEGRDGRDMPRGGRQEDSKNRRKKQQGEDV 445

Query: 187  LDCIVDLREYDVPYHIRFAIDNDVRCGQWYDVSISSTG---PL-LEKRVDLLQRAEVHVC 242
               I D+ E DV Y  R  ID  +RCG W+DV  SS+    P+ L    +      + V 
Sbjct: 446  TALIEDIFEADVLYITRCCIDLKLRCGLWHDVQRSSSALASPVALTPLPNCATAPPLRVL 505

Query: 243  AFDIETTKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGY- 301
            A+DIE +K PLKFPD++ D +++ISYM +GQGYLI+NR+ + EDI   E+  K   EG  
Sbjct: 506  AWDIECSKQPLKFPDSNTDNVILISYMFNGQGYLIVNRQWLSEDIHPFEFRAKKGMEGAG 565

Query: 302  -FKVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQ 360
             F + N   E ELL  +  H+ +++P I  TYNGD FD+PF+  R   +G       G  
Sbjct: 566  PFIIFNEKGEKELLSRFVQHVLKLRPHILATYNGDTFDFPFVYKRGELNGLDFISSFGIT 625

Query: 361  CDKNQGECRAKFA-CHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFA 419
               +    +   A  H+DCF WV+RDSYLPQGS+ LK V K KL ++P+EV+PEDMV  A
Sbjct: 626  PFTSDNSFQGNSALIHIDCFKWVERDSYLPQGSRTLKLVCKEKLRFNPVEVDPEDMVPLA 685

Query: 420  KEKPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQ 479
              +PQ +A YSVSDAVAT++LY  Y+H FI +L TIIPM+P+ VLR+GSGTLCE LLM +
Sbjct: 686  LNRPQELAVYSVSDAVATFFLYEKYIHNFILALCTIIPMTPEYVLRQGSGTLCEQLLMAE 745

Query: 480  AYKANVICPNKHQSDPEKFYRN------HLLESETYIGGHVECLESGVFRSDLPTSFKLD 533
            A   NV+ PNKHQ    +++R+      HL+  ++Y+GG VE L+ G+FR+DL  +F LD
Sbjct: 746  AAGRNVLFPNKHQHRYLQYWRDEKSKKMHLVLEDSYVGGRVESLKCGIFRNDLEETFTLD 805

Query: 534  PSAYEQLLNNLDRDLQYAIKVE-----GKMDLESVSNYDEVKNAIMEKLLRLQEEPIREE 588
              AY+ L++ LD  L + +  E       +  E   ++   +  I+E+L  L++  +   
Sbjct: 806  SDAYQFLIDTLDETLLFWLDQENGSSSSPLTPEDFPDWQVHRQDILERLTSLRDSRVLRC 865

Query: 589  CPLIYHLDVAAMYPNIILTNRLQPPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEIFMG 648
             P+IYHLDV+AMYPNIILT+RLQPP++V +E C+ C F++    C R++ W  + E+   
Sbjct: 866  LPVIYHLDVSAMYPNIILTHRLQPPAMVDEEYCSQCPFSKEAPQCQRRMTWRRKLEVSPA 925

Query: 649  KRSDYYHLKKQIESEFVD--------------------------------------GTNG 670
            ++     L+++++ +  D                                      G  G
Sbjct: 926  EKGHILPLQQKLQMKLFDVASSDRREKQQSPKEEAREDEDTESEEEWDEEGAKKKRGRGG 985

Query: 671  HLS-----------KSFLDLPKMEQQSRLKDRLKKYCQKAYKRV-LDKPVTELREAGICM 718
                          K++ +L + ++   L   +K +  KAYK+  + K V +  EA +C 
Sbjct: 986  FARSEETEAARASRKTWTELTEKQKHMELIKVVKDFSLKAYKKTKVQKEVDQ--EAIVCQ 1043

Query: 719  RENSFYVDTVRSFRDRRYEYKGLNKVWKGKLSEAKASGNSIK-IQEAQDMVVLYDSLQLA 777
            REN FYVDTVR+FRDRRY +K   K  +    + +  G S +  ++A D+++L DSLQLA
Sbjct: 1044 RENPFYVDTVRAFRDRRYIFKRRLKAAERLREKLEKEGGSFQEKKDADDVILLNDSLQLA 1103

Query: 778  HKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCV 837
            HKCILNSFYGYV R  ARWYSM+M  VVT  GA IIQ A+ +I+ +G  +ELDTDGIWC+
Sbjct: 1104 HKCILNSFYGYVKRDAARWYSMQMGAVVTKAGADIIQGAKNMIDGLGVTMELDTDGIWCM 1163

Query: 838  LPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECS 897
            LP  FP+ + F  K   K+    +P  +LN DV R  TNDQY    D  S+T++  +   
Sbjct: 1164 LPQKFPQKYMFLDK-TGKEFRFEFPTTILNQDVHRRYTNDQYLDF-DEDSRTFKRQTRNE 1221

Query: 898  IEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAE 957
            + FE+DGP++AM LPAS++   L+KKRY +F  DGT++ELKGFE+KRRGEL++IK+FQ E
Sbjct: 1222 VYFELDGPWRAMFLPASEKSDDLLKKRYVIFALDGTISELKGFEVKRRGELQIIKLFQTE 1281

Query: 958  LFDKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSE-LIDYISESSTMSKSLADYG 1016
            +F K + G T EE Y A AAVA R+ DLL +QG  + D E L + I     + K +   G
Sbjct: 1282 VFPKLIEGKTKEEAYGAAAAVAYRYRDLLTSQGVSVQDDEDLEELIVTKKVLGKPVVSQG 1341

Query: 1017 EQKSCAVTTARRLSDFL-GDTMVKDKGLRCQYIVACEPQGTPVSERAVPVAIFETDAEIM 1075
              KS ++TT +RL++ L  +T + D  +  QYIV   P G   + RAVPV +F +  E  
Sbjct: 1342 LGKSMSITTGKRLAELLRNETYLTDAPVSTQYIVVNRPVGVEKTARAVPVQLFHSSPETK 1401

Query: 1076 KFYLRKWC---------------KTSSD------------VGIRSIVDWSYYKQRLSSAI 1108
             FY  KW                + S D            + IR ++DWSYY +RL    
Sbjct: 1402 AFYYHKWLGISPSSVASFSSSSGEISGDASGSASTHALASIDIRQLIDWSYYSERLDVQF 1461

Query: 1109 QKIITIPAAMQKVSNPVPRVVHPDWLYKKVREKEDKFRQRKLVDIF----------SSLK 1158
            QKI+ IPA  Q + NP+P V  P+WL K+  +  +   Q K+   F          +  +
Sbjct: 1462 QKILCIPAMRQGLPNPIPEVAVPEWLKKQ--QATNNPLQSKMEHFFKWKKHAAPPTTETQ 1519

Query: 1159 KDDFLNKTCNAETNLMDENVEDLEDFPKKRRNSVNGPRPIVRCFEVNNEQKTVKTTDQVD 1218
            K+D   +  + +     E   D+E+ P+   N + G R   R  ++  EQK ++   +  
Sbjct: 1520 KEDRQERAESGDLFADGEAAVDVENIPEV--NCMQGSRLETRASQLPEEQKGLQARREER 1577

Query: 1219 SLRQQLEPSEVSDQQPSSQNAIDTENIDRIVDYKGWLELKKRKWKDNLDRRKKQKLGSLR 1278
              + + +  E    +                D   W+  +K+KWK   +R ++ +  +L 
Sbjct: 1578 ERQMEQKQEEKRMWKH---------------DIVAWVAAQKQKWKQQRERLRQSRARALS 1622

Query: 1279 ASHQ-ANGVSESLGDMINHKEAQRRTGVGSYFRRQETAMTRCHWQIIQ-LVPSSQSGVFL 1336
            A  +   G++ ++    N   A+     G         +T+  W ++   V S   G+F 
Sbjct: 1623 AVQRLPAGLTPAILTR-NPGAAKLMKHWGLSLHDVALLLTQ-PWHLLDFFVDSRDPGLFF 1680

Query: 1337 AWVVVEGI--MVRIPITVPRLFYLNSKDPIVEKFPGRRVNK--------------TLPHG 1380
              V  +       +P+ V R  +LN+K  I E    R +                 LP G
Sbjct: 1681 CRVATDASRGFYTVPVQVYRQVFLNTKREIGELLQDRNILSPDADISLKPLRGVYALPRG 1740

Query: 1381 RRSFNLIEVMIDEDQFRKESKKLAALL 1407
             R   L+E+ + E  F++E  KL +L 
Sbjct: 1741 VRQHELVEMSMPESLFQREKNKLPSLF 1767



 Score = 60.1 bits (144), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 40/168 (23%), Positives = 85/168 (50%), Gaps = 10/168 (5%)

Query: 1519 DQDMNSGPYNNELCGFDETTSSAPA-FRVVKQLIQRCLTDAVT-SGNVFADAILQHL--- 1573
            ++D ++   +  L  F  TT   PA FR + + +++   D  +  G V   ++++HL   
Sbjct: 2409 EKDYDADGPDESLADFHSTTQFHPAAFRTLGRSLEKLYRDLSSLRGRVTYPSVVRHLVAL 2468

Query: 1574 ----YRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEF-RKLGATIIFANFSKVIIDTG 1628
                Y W+CSP S L DP LH+ + +     F++ L+E   +   +++FAN  ++++ T 
Sbjct: 2469 PNFFYSWVCSPESLLFDPALHQKVLRYCTVYFSLFLSELSERRNLSVVFANPRRLLVATP 2528

Query: 1629 KFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLFMDQYNYGG 1676
               LS  + +  S++  L +  LF+ + +     + +++ +D  ++ G
Sbjct: 2529 HVLLSEGEKHLKSIICHLHSNALFDALPVTVSSAFVAVVQLDASSWIG 2576



 Score = 52.0 bits (123), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 34/134 (25%), Positives = 53/134 (39%), Gaps = 9/134 (6%)

Query: 1854 FRDPCPSFILPNVICSYCNDCRDLDL---------CRDMALLAQDWHCAMPQCGQPYDRE 1904
            +R P  S  L +V C  C    D+DL           +   L     C  P+CG+ +   
Sbjct: 2907 WRSPLKSLSLRDVECGACRTVDDVDLLLCIREEQEALENGELVDFKTCNCPRCGEAFPDA 2966

Query: 1905 VMENALLQIVRQRERLYHLQDLVCIRCNQVKAAHLAEQCACAGSFRCKEDASDFRSKMQI 1964
            ++E  L + V ++   Y  QD  C  CN V A +   +C C    R +    D+   ++ 
Sbjct: 2967 LIEAHLYRAVGEKYYAYAAQDHPCSSCNAVNALYRRSKCRCGKPLRARLKEEDWEEFIES 3026

Query: 1965 FLNIANRQGFQLLQ 1978
                A   G+  LQ
Sbjct: 3027 VQEFAVEMGYDKLQ 3040


>gi|335309279|ref|XP_003361572.1| PREDICTED: DNA polymerase epsilon catalytic subunit A, partial [Sus
           scrofa]
          Length = 742

 Score =  791 bits (2044), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 389/745 (52%), Positives = 522/745 (70%), Gaps = 31/745 (4%)

Query: 27  LEAKLGYDLFSEGDKRLGWLLTFASSSLEDEDTRKVYSCIDLYFVSQDGSTFKSKYKFRP 86
           ++ + G++   E  ++ GWL+    + + DED R + S +D YF+  DGS FK    ++P
Sbjct: 1   MDLRFGFERLKEPGEKTGWLINMHPTEILDEDKRLI-SAVDYYFIQDDGSRFKVALPYKP 59

Query: 87  YFYAATKEKMEMDVEAYLRRRYESQIADIEILEKEDLDLKNHLSGLHKSYLKISFDTVQQ 146
           YFY AT++  E +V ++L ++++ +IA +E + KEDLDL NHL GL ++Y+K+SF+TV+ 
Sbjct: 60  YFYIATRKGCEREVSSFLSKKFQGKIAKVETVPKEDLDLPNHLVGLKRNYIKLSFNTVED 119

Query: 147 LMDVKKDLLHVVERNQAKFDAAEAYESILTG------------KREQRPQDFLDCIVDLR 194
           L+ V+K++   V++N+ +  A++AY ++L+             +  ++  D LD IVD+R
Sbjct: 120 LVKVRKEISPAVKKNREQGHASDAYTAMLSSVLQGGSVVMDEEETSKKIADQLDNIVDMR 179

Query: 195 EYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLLE--KRVDLLQRAEVHVCAFDIETTKLP 252
           EYDVPYHIR +ID  +    WY+V        +E  +R DL++R +  V AFDIETTKLP
Sbjct: 180 EYDVPYHIRLSIDLKIHVAHWYNVRYRGNAFPVEIARRDDLVERPDPVVLAFDIETTKLP 239

Query: 253 LKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNVNNEIE 312
           LKFPDA+ D IMMISYM+DGQGYLI NRE V EDIED E+TPKPE+EG F V N  +E+ 
Sbjct: 240 LKFPDAETDQIMMISYMIDGQGYLITNREIVSEDIEDFEFTPKPEYEGPFCVFNEPDEVH 299

Query: 313 LLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDKNQGECRAKF 372
           L++ WF H+QE KP I VTYNGD+FDWPF+E RAA HG  M +E+GFQ D +QGE ++  
Sbjct: 300 LIQRWFEHVQETKPTIMVTYNGDFFDWPFVEARAAVHGLSMYQEIGFQKD-SQGEYKSSQ 358

Query: 373 ACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQMMASYSVS 432
             H+DC  WVKRDSYLP GS  LKA  KAKLGYDP+E++PEDM R A E+PQ +A+YSVS
Sbjct: 359 CIHMDCLRWVKRDSYLPVGSHNLKAAAKAKLGYDPVELDPEDMCRMATEQPQTLATYSVS 418

Query: 433 DAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVICPNKHQ 492
           DAVATYYLYM YVHPFIF+L TIIPM PDEVLRKGSGTLCE LLMVQA+ AN+I PNK +
Sbjct: 419 DAVATYYLYMKYVHPFIFALCTIIPMEPDEVLRKGSGTLCEALLMVQAFHANIIFPNKQE 478

Query: 493 SDPEKFYRN-HLLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQLLNNLDRDLQYA 551
            +  K   + H+L++ETY+GGHVE LESGVFRSD+P  F+++P+A++ LL  +++ + +A
Sbjct: 479 QEFNKLTDDGHVLDAETYVGGHVEALESGVFRSDIPCRFRMNPAAFDFLLQRVEKTMHHA 538

Query: 552 IKVEGKMDLESVSNYDEVKNAIMEKLLRLQEEPIREECPLIYHLDVAAMYPNIILTNRLQ 611
           I+ E K+ ++ V+N+ EV + I  KL  L++ P R ECPLIYHLDV AMYPNIILTNRLQ
Sbjct: 539 IEEEEKVPMDQVTNFQEVCDQIKTKLTSLKDVPNRIECPLIYHLDVGAMYPNIILTNRLQ 598

Query: 612 PPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYYHLKKQIESE-FVDGTNG 670
           P ++V +  C ACDFN+PG  C RK+ W WRGE     RS+Y+ ++ Q+ESE F   T  
Sbjct: 599 PSAMVDEATCAACDFNKPGANCQRKMAWQWRGEFMPASRSEYHRIQHQLESEKFPPLTPE 658

Query: 671 HLSKSFLDLPKMEQQSRLKDRL------------KKYCQKAYKRVLDKPVTELREAGICM 718
             +++F +L + EQ    K RL              YC+KAYK++    V E R   IC 
Sbjct: 659 GPARAFHELSREEQAKYEKRRLAGFLSSPSSHECSDYCRKAYKKIHVTKVEE-RLTTICQ 717

Query: 719 RENSFYVDTVRSFRDRRYEYKGLNK 743
           RENSFYVDTVR+FRDRRYE+KGL+K
Sbjct: 718 RENSFYVDTVRAFRDRRYEFKGLHK 742


>gi|156101235|ref|XP_001616311.1| DNA polymerase epsilon, catalytic subunit a [Plasmodium vivax Sal-1]
 gi|148805185|gb|EDL46584.1| DNA polymerase epsilon, catalytic subunit a, putative [Plasmodium
            vivax]
          Length = 2892

 Score =  782 bits (2020), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 474/1272 (37%), Positives = 702/1272 (55%), Gaps = 151/1272 (11%)

Query: 176  TGKREQRPQDFLDCIVDLREYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLLEKRV---D 232
            T K+    ++ L  I ++ EYDV Y  R  ID ++RCG WY ++        E      +
Sbjct: 278  TKKQILSKEEILQEITEMYEYDVKYTTRICIDQNIRCGLWYRITRDEEELYTETEAVHFE 337

Query: 233  LLQR---AEVHVCAFDIETTKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIED 289
            +L +   A ++V A+DIE  K  LKFPD + D I++ISYM + QGYLI+NR  + ++I +
Sbjct: 338  VLNKKVLAPLNVLAWDIECYKDELKFPDKEKDEIILISYMYNAQGYLIVNRNVMSKNIRE 397

Query: 290  LEYTPKPEFEG--YFKVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAA 347
              Y P  E+ G   FK+ N  NE  LL+ +  H++ +K  I+VTYNGD+FD P+L  R  
Sbjct: 398  FLYKPNEEYSGAGTFKIFNEQNEYFLLKRFLEHIKILKIHIFVTYNGDFFDIPYLFRRCE 457

Query: 348  HHGFKMSEELGFQCDKNQGECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDP 407
             +   + +E+GF  + N+ EC   F  ++D + WV+RDSYLP GS+ LK+V K KL Y+P
Sbjct: 458  INNLSVPKEIGFIMNNNKQECACNFILNIDAYKWVERDSYLPNGSRTLKSVCKIKLKYNP 517

Query: 408  LEVNPEDMVRFAKEKPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKG 467
             EV+PE MV  A++ PQ +A YSVSDAVAT+YLY  ++H F+F+L +IIPM+PD VLR+G
Sbjct: 518  TEVDPELMVSIARKNPQHLAVYSVSDAVATFYLYDKFIHNFLFALCSIIPMNPDNVLRQG 577

Query: 468  SGTLCEMLLMVQAYKANVICPNKHQSDPEKFY------RNHLLESETYIGGHVECLESGV 521
            SGTLCE LLM +AYK N++ PNK +    +++      + + +  ++++GG V+ L+ G+
Sbjct: 578  SGTLCEQLLMAEAYKKNILFPNKFKPAYNQYFTDVENKKKYFIYDDSFVGGTVQSLKCGI 637

Query: 522  FRSDLPTSFKLDPSAYEQLLNNLDRDLQYAIKV----------EGKMDLESVSNYDEVKN 571
            +R DL   F LD   Y+ LL N+D  + + ++           +  ++   + N  ++K+
Sbjct: 638  YRDDLKEHFNLDVDTYKYLLQNVDSIIDFWVQKDLNKNCSPSDQKYINKNQIVNLKQIKS 697

Query: 572  AIMEKLLRLQEEPIREECPLIYHLDVAAMYPNIILTNRLQPPSIVTDEVCTACDFNRPGK 631
             IM+KL    + P    CP IYHLDVAAMYPNIIL++RLQP +I+T + C  C F +   
Sbjct: 698  DIMDKLNFFIQNPSISICPNIYHLDVAAMYPNIILSHRLQPNAIITQDHCFNCSFYKQRH 757

Query: 632  TCLRKLEWVWRGEI-------------------FMGKRSDYYHLKKQIESEFVDGTNG-- 670
             C +++ W  + EI                   F  ++S ++ +  + ES+     N   
Sbjct: 758  LCQKQMVWKRKLEISPIDYGHVLSLKQDLKTRLFYPQKS-FFKMNNKEESDSSTNDNSAD 816

Query: 671  ---HLSKSFLDLPKMEQQSRLKDRLKKYCQKAYKRVLDKPVTELREAG-ICMRENSFYVD 726
                  KS+ +L + +Q   L   +K+  Q+ +K+   K   E+  +  +C REN FYVD
Sbjct: 817  VPLSKKKSWNELTEKQQHDELMKVIKECSQRVFKKT--KVAKEVDASSLVCQRENPFYVD 874

Query: 727  TVRSFRDRRYEY-KGLNKVWKGKLSEAKASG-NSIKIQEAQDMVVLYDSLQLAHKCILNS 784
            TVR+FRDRRY Y KGL +    K    KA+  + IKIQE  D ++L DSLQLAHKCILNS
Sbjct: 875  TVRTFRDRRYVYKKGLKESEHEKKELLKANKIDYIKIQELDDKILLNDSLQLAHKCILNS 934

Query: 785  FYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLPGSFPE 844
            FYGYV RK +RWYS +M  +VTYTG++II  A  LI KIG P+ELDTDGIWC+LP  FPE
Sbjct: 935  FYGYVKRKSSRWYSDQMGAIVTYTGSQIINGAFNLINKIGIPMELDTDGIWCMLPKKFPE 994

Query: 845  NF----------------------TFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTL 882
             +                        K     KK+   +P  +LN ++ +  TNDQY  +
Sbjct: 995  IYDVYIVEKSALNKMKEYEDKTEEELKNDSSVKKVEFEFPTNILNFEMHKKWTNDQY-LI 1053

Query: 883  VDPVSKTYETHSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEI 942
             +  +  YE  S+  I FE+DGP+  M LPAS++   L+KKRY VFND   ++ELKGFEI
Sbjct: 1054 YNESTDDYECISKNEIFFELDGPWHGMFLPASEKSDDLLKKRYVVFNDKYKISELKGFEI 1113

Query: 943  KRRGELKLIKVFQAELFDKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDI-ADSELIDY 1001
            KRRGEL++I+ FQ+E+F+ FL G T EE Y   +  AN+W +L+D++  DI  D EL D 
Sbjct: 1114 KRRGELRIIQKFQSEIFNHFLKGKTKEESYYYASLTANKWKNLIDSKAIDIDNDDELFDL 1173

Query: 1002 ISESSTMSKSLADYGEQKSCAVTTARRLSDFLGDT-MVKDKGLRCQYIVACEPQGTPVSE 1060
            I     ++KS+ +    KS  +TTA+RLS+ L +T  V+D  +  Q+IVA +P G+ ++ 
Sbjct: 1174 ILAKKVLNKSVKEQPNAKSFGITTAKRLSELLCNTSYVEDNNVSTQFIVASKPIGSDITF 1233

Query: 1061 RAVPVAIFETDAEIMKFYLRKW--CKTSSD--VGIRSIVDWSYYKQRLSSAIQKIITIPA 1116
            RA+P+ IF+T+ E    YL KW   K   D  V +R I+DW YYKQ+L   I K++ IPA
Sbjct: 1234 RAIPIQIFKTNVETQIHYLGKWLGVKFPPDVPVNVRDIIDWDYYKQKLEVQILKLVIIPA 1293

Query: 1117 AMQKVSNPVPRVVHPDWLYKKVREKEDKFRQRKLVDIF--SSLKKDD----FLNKTCNAE 1170
              Q ++NP+  +  P+WL K++   E K  Q+K+   F   ++KK+       N    + 
Sbjct: 1294 IKQNINNPITSISVPEWLKKQINISEGK--QKKITAFFVKKTVKKESTPEGISNDPAGSS 1351

Query: 1171 TNLMDENVEDLE--DFPKKRRNSVNGPRPI-VRCFEVNNEQKTVKT-----TDQVDSLRQ 1222
            T L  E  E+++  D P  R      P P+   C  +N     +         +  SL Q
Sbjct: 1352 TPLKGETDEEVKKADDPSLRSLEKKSPFPVETACTAMNVSNDPLHNGAPPLGAKKRSLEQ 1411

Query: 1223 QLEPSEVSDQQPSSQ----------------------NAIDTE---------------NI 1245
             L  + +S ++   Q                      N++DT                NI
Sbjct: 1412 CLLENFISKRKKLGQLNDNSLAGLTHSNSGSMVYKKVNSLDTYLDNNNNVIIINHEKINI 1471

Query: 1246 DRI----------VDYKGWLELKKRKWKDNLDRRKKQKLGSLRASHQANGVSESLGDMIN 1295
            + +           D+K W+++  R WK+N  + KK     +R   ++     SLGD   
Sbjct: 1472 NNLKYTELFEMFQTDFKKWMQINNRIWKNNRSQIKK-----IRNEDRSKRKKYSLGDDEE 1526

Query: 1296 HKEAQRRTGVGS 1307
             +  ++RTG  S
Sbjct: 1527 DERGRKRTGANS 1538



 Score = 64.7 bits (156), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 41/146 (28%), Positives = 76/146 (52%), Gaps = 9/146 (6%)

Query: 26  ELEAKLGYDLFSEGDKRLGWLLTFASSSL----EDEDTRKVYSCIDLYFVSQDGSTFKSK 81
           +LE+K     +    ++ G+L     + L    ++ +  +  + + +YFVS +  T++  
Sbjct: 27  KLESKFNIKPWLSKGQKEGYLYNIVPTVLNVVVKNSNKSQKKTGVHMYFVSDNSKTWRLT 86

Query: 82  YKFRPYFYAATKEKMEMD-VEAYLRRRYESQIADIEILEKEDLDLKNHL----SGLHKSY 136
             +RPYFY  TK     + V  YL++  +    +I+ ++KEDL L +HL    S L   +
Sbjct: 87  LFYRPYFYLKTKNIHNYEAVTKYLKKELDKYNVEIDYVKKEDLSLYDHLNKKRSYLSNIF 146

Query: 137 LKISFDTVQQLMDVKKDLLHVVERNQ 162
            K+SFDT+  LM  +  +  ++ERN+
Sbjct: 147 FKLSFDTIDNLMSARDFISKIIERNK 172



 Score = 61.2 bits (147), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 30/130 (23%), Positives = 60/130 (46%), Gaps = 8/130 (6%)

Query: 1854 FRDPCPSFILPNVICSYCNDCRDLDLCRDMALLAQD------WHCAMPQCGQPYDREVME 1907
            ++ PC   IL ++ C  C+    +++   +     +      W C    C   YD + +E
Sbjct: 2753 WKSPCQELILKDIFCENCSSVYHMNVVTSLVEAEINGKPSFIWLCK--NCNSKYDNDFIE 2810

Query: 1908 NALLQIVRQRERLYHLQDLVCIRCNQVKAAHLAEQCACAGSFRCKEDASDFRSKMQIFLN 1967
              +L ++++    Y+ QDLVC  CN +K+ +    C C  +F  + D +++   ++I  N
Sbjct: 2811 LKILSLLQETFDAYNAQDLVCNNCNAIKSFYRRAICKCGQTFTPRLDITNWTRTLEIMEN 2870

Query: 1968 IANRQGFQLL 1977
            +A      +L
Sbjct: 2871 LATMLNMPIL 2880


>gi|82595318|ref|XP_725800.1| DNA polymerase epsilon catalytic subunit [Plasmodium yoelii yoelii
            17XNL]
 gi|23480935|gb|EAA17365.1| DNA polymerase epsilon catalytic subunit-related [Plasmodium yoelii
            yoelii]
          Length = 2036

 Score =  780 bits (2014), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 432/1063 (40%), Positives = 639/1063 (60%), Gaps = 90/1063 (8%)

Query: 184  QDFLDCIVDLREYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLLEK-RVDLLQR---AEV 239
            ++ +  +V+L EYDV Y  R  ID ++RCG WY V+        E+   ++L++   A +
Sbjct: 272  EEIMSELVELYEYDVKYTTRLCIDKNIRCGLWYKVTRLEDEIYTEQIYFEVLKKEILAPL 331

Query: 240  HVCAFDIETTKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFE 299
            +V A+DIE  K  LKFPD + D I++ISYM + QGYLI+NR  + ++I +  Y P  E+ 
Sbjct: 332  NVLAWDIECYKDELKFPDKEKDEIILISYMYNAQGYLIVNRNVMSKNIREFLYKPNNEYS 391

Query: 300  G--YFKVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEEL 357
            G   FK+ N  NE  LL+ +  H++ ++  I+VTYNGD+FD P+L  R   +   + +E+
Sbjct: 392  GAGTFKIFNEQNEYFLLKRFIEHIKLLRIHIFVTYNGDFFDIPYLCRRCEINNISVPKEI 451

Query: 358  GFQCDKNQGECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVR 417
            GF  + N+ EC   F  ++D + WV+RDSYLP GS+ LK+V K KL Y+P EV+PE MV 
Sbjct: 452  GFIMN-NKKECSCNFILNIDAYKWVERDSYLPNGSRTLKSVCKIKLKYNPTEVDPELMVP 510

Query: 418  FAKEKPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLM 477
             A+  PQ +A YSVSDAVAT+YLY  ++H F+F+L +IIPM+PD VLR+GSGTLCE LLM
Sbjct: 511  IARNNPQHLAVYSVSDAVATFYLYDKFIHSFLFALCSIIPMNPDNVLRQGSGTLCEQLLM 570

Query: 478  VQAYKANVICPNKHQSDPEKFY------RNHLLESETYIGGHVECLESGVFRSDLPTSFK 531
             +AYK N++ PNK +    +++      + + +  ++++GG V+ L+ G++R DL  +F 
Sbjct: 571  AEAYKKNILFPNKSKPIYNQYFTDVNNKKKYFIYDDSFVGGKVQSLKCGIYRDDLKENFH 630

Query: 532  LDPSAYEQLLNNLD--------RDLQYAIKVEGK--MDLESVSNYDEVKNAIMEKLLRLQ 581
            L+   Y+ LLNN+D        +DL   + +  K  ++ + + N + +KN I++KL    
Sbjct: 631  LNSDTYKYLLNNVDNIIDFWIQKDLNKNLNINDKKYVNKKQILNLENIKNDIIQKLTFFI 690

Query: 582  EEPIREECPLIYHLDVAAMYPNIILTNRLQPPSIVTDEVCTACDFNRPGKTCLRKLEWVW 641
            + P    CP IYHLDVAAMYPNIIL++RLQP +I+T + C  C + +    C +K+ W  
Sbjct: 691  QNPNISSCPNIYHLDVAAMYPNIILSHRLQPNAIITPDHCFNCSYYKQRHLCQKKMIWKR 750

Query: 642  RGEIFMGKRSDYYH---LKKQIESEFVDGTNGHL-----------------------SKS 675
            + EI      DY H   LK+ +++      N +                         KS
Sbjct: 751  KLEI---SPIDYGHILSLKQDLKTRLFYPQNPYFKMENNEDSESTANDAVMKPVVNKKKS 807

Query: 676  FLDLPKMEQQSRLKDRLKKYCQKAYKRVLDKPVTELREAG-ICMRENSFYVDTVRSFRDR 734
            + +L + +Q   L   +K+  QK +K+   K   E+  +  IC REN FYVDTV++FRDR
Sbjct: 808  WNELTEKQQHDELMKVIKECSQKVFKKT--KLAKEVDASSLICQRENPFYVDTVKTFRDR 865

Query: 735  RYEYK-GLNKVWKGKLSEAKASG-NSIKIQEAQDMVVLYDSLQLAHKCILNSFYGYVMRK 792
            RY YK GL +    K    K S  + +KI E  + ++L DSLQLAHKCILNSFYGYV RK
Sbjct: 866  RYVYKRGLKECEHEKRELLKQSKIDYVKIHELDEKILLNDSLQLAHKCILNSFYGYVKRK 925

Query: 793  GARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLPGSFPENFTFKTKD 852
             +RWYS +M  VVTYTG++II +A  LI+KIG P+ELDTDGIWC+LP  FPE +     D
Sbjct: 926  SSRWYSDQMGAVVTYTGSQIINDAFKLIDKIGIPMELDTDGIWCMLPKRFPEIYDVYILD 985

Query: 853  LKKKLT-----------------------ISYPCVMLNVDVARNNTNDQYQTLVDPVSKT 889
             K +L                          +P  +LN+++ +  TN+QY  + +  +  
Sbjct: 986  -KDELNNIKQYENMTEDAIKNNKNIKKMNFEFPTNILNLEMHKKWTNNQY-LVYNEKTND 1043

Query: 890  YETHSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELK 949
            Y+  S+  I FE+DGP+ +M LPAS++   L+KKRY VFND   ++ELKGFEIKRRGEL+
Sbjct: 1044 YDCISKNEIFFELDGPWHSMFLPASEKSDDLLKKRYVVFNDKYQISELKGFEIKRRGELR 1103

Query: 950  LIKVFQAELFDKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIA-DSELIDYISESSTM 1008
            +I+ FQ+E+F+ FL G T EE Y   +  AN+W +L+D++  DI  D EL D I     +
Sbjct: 1104 IIQRFQSEIFNNFLKGKTKEESYYYASLTANKWKNLIDSKAIDIENDDELFDLILAKKVL 1163

Query: 1009 SKSLADYGEQKSCAVTTARRLSDFLGDT-MVKDKGLRCQYIVACEPQGTPVSERAVPVAI 1067
            +KS+ +    KS  +TTA+RLS+ L +T  ++D  +  Q+IVA +P G+ V+ RA+P+ I
Sbjct: 1164 NKSVKEQPNAKSLGITTAKRLSELLSNTSYIEDNNVSTQFIVASKPIGSDVTFRAIPIQI 1223

Query: 1068 FETDAEIMKFYLRKWCKT----SSDVGIRSIVDWSYYKQRLSSAIQKIITIPAAMQKVSN 1123
            F+T+ +   FYL KW       +  V +R I+DW YYKQ+L   I K++ IPA  Q ++N
Sbjct: 1224 FKTNVDTQIFYLSKWLGMQFPPNVPVNVRDIIDWDYYKQKLEVQILKLVIIPAIKQNINN 1283

Query: 1124 PVPRVVHPDWLYKKVREKEDKFRQRKLVDIFSSLKKDDFLNKT 1166
            P+  +  PDWL K++   E+K  Q+K+   F   +K + L+ T
Sbjct: 1284 PITSISIPDWLEKQINISEEK--QKKITSFFVKKEKPEMLSNT 1324



 Score = 62.4 bits (150), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 40/150 (26%), Positives = 78/150 (52%), Gaps = 9/150 (6%)

Query: 26  ELEAKLGYDLFSEGDKRLGWLLTFASSSL----EDEDTRKVYSCIDLYFVSQDGSTFKSK 81
           +LE K     + +  ++ G+L     +++    +D    +  + + +YFVS +  T++  
Sbjct: 27  KLEGKFKIKTWIDKGEKEGYLYNIVPTTMSVLVKDSTKTQKKTGVHMYFVSDNNKTWRLT 86

Query: 82  YKFRPYFYAATKEKMEMD-VEAYLRRRYESQIADIEILEKEDLDLKNHL----SGLHKSY 136
             +RPYFY  TK     + V  +L++       +IE ++K+D+ L +HL    S L+  +
Sbjct: 87  LFYRPYFYLKTKNIYNYESVSNFLKKELGKYNVEIEFVKKDDISLFDHLNKKRSYLNNIF 146

Query: 137 LKISFDTVQQLMDVKKDLLHVVERNQAKFD 166
            K+SFDT++ L+  +  L  ++ERN+   D
Sbjct: 147 FKLSFDTIENLVRSRTFLERIIERNKKSKD 176


>gi|410047562|ref|XP_522564.4| PREDICTED: DNA polymerase epsilon catalytic subunit A, partial [Pan
           troglodytes]
          Length = 829

 Score =  779 bits (2011), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 386/733 (52%), Positives = 511/733 (69%), Gaps = 47/733 (6%)

Query: 51  SSSLEDEDTRKVYSCIDLYFVSQDGSTFKSKYKFRPYFYAATKEKMEMDVEAYLRRRYES 110
           ++ + DED R + S +D YF+  DGS FK    ++PYFY AT++  E +V ++L ++++ 
Sbjct: 104 ATEILDEDKR-LGSAVDYYFIQDDGSRFKVALPYKPYFYIATRKGCEREVSSFLSKKFQG 162

Query: 111 QIADIEILEKEDLDLKNHLSGLHKSYLKISFDTVQQLMDVKKDLLHVVERNQAKFDAAEA 170
           +IA +E + KEDLDL NHL GL ++Y+++SF TV+ L+ V+K++   V++N+ +  A++A
Sbjct: 163 KIAKVETVPKEDLDLPNHLVGLKRNYIRLSFHTVEDLVKVRKEISPAVKKNREQDHASDA 222

Query: 171 YESILTG--------------------------------KREQRPQDFLDCIVDLREYDV 198
           Y ++L+                                 +  ++  D LD IVD+REYDV
Sbjct: 223 YTALLSRPIVAATTLAAELVALLLIPSVLQRGGVITDEEETSKKIADQLDNIVDMREYDV 282

Query: 199 PYHIRFAIDNDVRCGQWYDVSISSTGPLLE--KRVDLLQRAEVHVCAFDIETTKLPLKFP 256
           PYHIR +ID  +    WY+V        +E  +R DL++R +  V AFDIETTKLPLKFP
Sbjct: 283 PYHIRLSIDLKIHVAHWYNVRYRGNAFPVEITRRDDLVERPDPVVLAFDIETTKLPLKFP 342

Query: 257 DADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNVNNEIELLRL 316
           DA+ D IMMISYM+DGQGYLI NRE V EDIED E+TPKPE+EG F V N  +E  L++ 
Sbjct: 343 DAETDQIMMISYMIDGQGYLITNREIVSEDIEDFEFTPKPEYEGPFCVFNEPDEAHLIQR 402

Query: 317 WFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDKNQGECRAKFACHL 376
           WF H+QE KP I VTYNGD+FDWPF+E RAA HG  M +E+GFQ D +QGE +A    H+
Sbjct: 403 WFEHVQETKPTIMVTYNGDFFDWPFVEARAAVHGLSMQQEIGFQKD-SQGEYKAPQCIHM 461

Query: 377 DCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQMMASYSVSDAVA 436
           DC  WVKRDSYLP GS  LKA  KAKLGYDP+E++PEDM R A E+PQ +A+YSVSDAVA
Sbjct: 462 DCLRWVKRDSYLPVGSHNLKAAAKAKLGYDPVELDPEDMCRMATEQPQTLATYSVSDAVA 521

Query: 437 TYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVICPNKHQSDPE 496
           TYYLYM YVHPFIF+L TIIPM PDEVLRKGSGTLCE LLMVQA+ AN+I PNK + +  
Sbjct: 522 TYYLYMKYVHPFIFALCTIIPMEPDEVLRKGSGTLCEALLMVQAFHANIIFPNKQEQEFN 581

Query: 497 KFYRN-HLLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQLLNNLDRDLQYAIKVE 555
           K   + H+L+SETY+GGHVE LESGVFRSD+P  F+++P+A++ LL  +++ L++A++ E
Sbjct: 582 KLTDDGHVLDSETYVGGHVEALESGVFRSDIPCRFRMNPAAFDFLLQRVEKTLRHALEEE 641

Query: 556 GKMDLESVSNYDEVKNAIMEKLLRLQEEPIREECPLIYHLDVAAMYPNIILTNRLQPPSI 615
            K+ +E V+N++EV + I  KL  L++ P R ECPLIYHLDV AMYPNIILTNRLQP ++
Sbjct: 642 EKVPVEQVTNFEEVCDEIKSKLASLKDVPSRIECPLIYHLDVGAMYPNIILTNRLQPSAM 701

Query: 616 VTDEVCTACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYYHLKKQIESE-----FVDGTNG 670
           V +  C ACDFN+PG  C RK+ W WRGE     RS+Y+ ++ Q+ESE     F +G   
Sbjct: 702 VDEATCAACDFNKPGANCQRKMAWQWRGEFMPASRSEYHRIQHQLESEKFPPLFPEGP-- 759

Query: 671 HLSKSFLDLPKMEQQSRLKDRLKKYCQKAYKRVLDKPVTELREAGICMRENSFYVDTVRS 730
             +++F +L + EQ    K RL  YC+KAYK++    V E R   IC RENSFYVDTVR+
Sbjct: 760 --ARAFHELSREEQAKYEKRRLADYCRKAYKKIHITKVEE-RLTTICQRENSFYVDTVRA 816

Query: 731 FRDRRYEYKGLNK 743
           FRDRRYE+KGL+K
Sbjct: 817 FRDRRYEFKGLHK 829


>gi|86171816|ref|XP_966285.1| DNA polymerase epsilon, catalytic subunit a, putative [Plasmodium
            falciparum 3D7]
 gi|46361254|emb|CAG25115.1| DNA polymerase epsilon, catalytic subunit a, putative [Plasmodium
            falciparum 3D7]
          Length = 2907

 Score =  778 bits (2009), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 440/1080 (40%), Positives = 637/1080 (58%), Gaps = 93/1080 (8%)

Query: 196  YDVPYHIRFAIDNDVRCGQWYDVSISSTGPLLEK-RVDLLQR---AEVHVCAFDIETTKL 251
            YDV Y  R  ID ++RCG WY V         E  + ++L +   A +++ A+DIE  K 
Sbjct: 291  YDVKYLTRICIDKNIRCGLWYKVKREEDELYTELIQFEILNKKVLAPLNILAWDIECYKD 350

Query: 252  PLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEG--YFKVTNVNN 309
             LKFPD + D I++ISYM + QGYLI+NR  + ++I +  Y P  E+ G   FK+ N  N
Sbjct: 351  ELKFPDKEKDEIILISYMYNAQGYLIVNRNVMSKNIREFLYKPNEEYSGAGTFKIFNEKN 410

Query: 310  EIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDKNQGECR 369
            E  LL+ +  H++ +K  I+VTYNGD+FD P+L  R   +   +S E+GF  + N+ EC 
Sbjct: 411  EYFLLKRFLEHIRLLKIHIFVTYNGDFFDIPYLYRRCEINNLSVSREIGFIMN-NKQECS 469

Query: 370  AKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQMMASY 429
              F  ++D + WV+RDSYLP GS+ LK+V K KL Y+P EV+PE MV  AK  PQ +A Y
Sbjct: 470  CNFILNIDAYKWVERDSYLPNGSRTLKSVCKIKLKYNPTEVDPELMVPIAKNNPQHLAVY 529

Query: 430  SVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVICPN 489
            SVSDAVAT+YLY  ++H F+F+L++IIPM+PD VLR+GSGTLCE LLM +AY+ N++ PN
Sbjct: 530  SVSDAVATFYLYDKFIHNFLFALSSIIPMNPDNVLRQGSGTLCEQLLMAEAYRKNILFPN 589

Query: 490  KHQ-------SDPEKFYRNHLLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQLLN 542
            K +       +DPE   + + +  ++++GG V+ L+ G++R DL   F LD   Y+ L N
Sbjct: 590  KSKPIYNQYFTDPEN-KKKYFIYDDSFVGGTVQSLKCGIYRDDLKEFFSLDVDTYKYLYN 648

Query: 543  NLDRDLQYAIKVE----------GKMDLESVSNYDEVKNAIMEKLLRLQEEPIREECPLI 592
            ++D  + + I+ +            ++   + N D++K  I  KL    E P    CP I
Sbjct: 649  SIDHIIDFWIQKDLNKNANINDTKYINKNQIINLDQIKQDIKNKLNFFIENPNINICPNI 708

Query: 593  YHLDVAAMYPNIILTNRLQPPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEI------- 645
            YHLDVAAMYPNIIL++RLQP +I+T + C  C F +    C +K+ W  + EI       
Sbjct: 709  YHLDVAAMYPNIILSHRLQPNAIITPDHCFNCSFYKQRHLCQKKMIWKRKLEISPIDYGH 768

Query: 646  ------------FMGKRSDYYHLKKQIESEFVDG-----TNGHLSKSFLDLPKMEQQSRL 688
                        F  ++S +Y ++ + ES+  +       N    KS+ +L   +Q   L
Sbjct: 769  VLSLKQDLKTRLFFPQKS-FYKMQNKEESDSTENENSMDINASKKKSWNELTDKQQHDEL 827

Query: 689  KDRLKKYCQKAYKRVLDKPVTELREAG-ICMRENSFYVDTVRSFRDRRYEY-KGLNKVWK 746
               +K   QK +K+   K   E+  +  +C REN FYVD V++FRDRRY Y KGL +   
Sbjct: 828  MKVIKDCSQKVFKKT--KVSKEVDASSLVCQRENPFYVDAVKTFRDRRYVYKKGLKECEH 885

Query: 747  GKLSEAKASG-NSIKIQEAQDMVVLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVV 805
             K    K S  + IKIQE  D ++L DSLQLAHKCILNSFYGYV R+ +RWYS +M  +V
Sbjct: 886  EKRELLKQSKIDYIKIQELDDKILLNDSLQLAHKCILNSFYGYVKRRSSRWYSDQMGAIV 945

Query: 806  TYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLPGSFPENFTF---------KTKDLK-- 854
            TYTG++II  A  LI KIG P+ELDTDGIWC+LP +FPE +           K KD +  
Sbjct: 946  TYTGSQIINGAFNLINKIGIPMELDTDGIWCMLPKNFPEMYDVYILDKKELNKKKDYETK 1005

Query: 855  -----------KKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEFEVD 903
                       KK+   +P  +LN ++ +  TNDQY  + +  +  YE  S+  I FE+D
Sbjct: 1006 SEEELKNDNNVKKVDFEFPTNILNFEMHKKWTNDQY-LVYNEHTDDYECISKNEIFFELD 1064

Query: 904  GPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFL 963
            GP+  M LPAS++   L+KKRY VFN+   ++ELKGFEIKRRGEL++I+ FQ+E+F+ FL
Sbjct: 1065 GPWHGMFLPASEKSDDLLKKRYVVFNNKYKISELKGFEIKRRGELRIIQRFQSEIFNHFL 1124

Query: 964  HGSTIEECYSAVAAVANRWLDLLDNQGKDI-ADSELIDYISESSTMSKSLADYGEQKSCA 1022
             G T EE Y   +  AN+W +L+D +  DI  D EL D I     ++KS+ +    KS  
Sbjct: 1125 KGKTKEESYYHASLTANKWKNLIDTKAIDIDNDDELFDLILAKKVLNKSVKEQPNAKSFG 1184

Query: 1023 VTTARRLSDFLGD-TMVKDKGLRCQYIVACEPQGTPVSERAVPVAIFETDAEIMKFYLRK 1081
            +TTA+RLS+ L + + ++D  +  Q+IV  +P G+ ++ RA+P+ IF+T+ +    YL K
Sbjct: 1185 ITTAKRLSELLNNASYIEDNNVSTQFIVVSKPIGSDITFRAIPIQIFKTNIDTQIHYLSK 1244

Query: 1082 WCKT----SSDVGIRSIVDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLYKK 1137
            W  T    +  V +R I+DW YYKQ+L   I K++ IPA  Q ++NP+  +  PDWL K+
Sbjct: 1245 WLGTKFPPNVPVNVRDIIDWDYYKQKLEVQILKLVIIPAIKQNINNPITSISVPDWLKKQ 1304

Query: 1138 VREKEDKFRQRKLVDIF--SSLKKDDFLNKTCNAETNLMDENVEDLEDFPKKRRNSVNGP 1195
            +   E K  Q+K+   F   ++KK+D  +   +A+  L    V D+ DF K    + N P
Sbjct: 1305 INISEGK--QKKITSFFVKKNIKKEDTTSPLHSADVKL----VNDIHDF-KDSNETTNTP 1357



 Score = 61.6 bits (148), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 33/100 (33%), Positives = 59/100 (59%), Gaps = 5/100 (5%)

Query: 66  IDLYFVSQDGSTFKSKYKFRPYFYAATKEKMEMD-VEAYLRRRYESQIADIEILEKEDLD 124
           + +YFVS +  T++    +RPYFY  TK     + V  +L++  +    +I+ ++KEDL 
Sbjct: 71  VHMYFVSDNNKTWRLTLFYRPYFYLKTKNIHNYEQVTKFLKKELDKYNVEIDYVKKEDLS 130

Query: 125 LKNHL----SGLHKSYLKISFDTVQQLMDVKKDLLHVVER 160
           L +HL    S L   + K+S+DT++ LM+ +  L+ ++ER
Sbjct: 131 LYDHLNKKRSYLSNIFFKLSYDTIENLMNARDFLVKIIER 170



 Score = 60.5 bits (145), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 31/135 (22%), Positives = 62/135 (45%), Gaps = 8/135 (5%)

Query: 1854 FRDPCPSFILPNVICSYCNDCRDLDLCRDMALLAQD------WHCAMPQCGQPYDREVME 1907
            ++ PC   IL ++ C +C+    +++   +            W C    C   +D E +E
Sbjct: 2768 WKSPCHELILKDIFCDHCSSVYHMNVVTSLVEAEISGKPSFIWLCK--NCNFKFDNEFIE 2825

Query: 1908 NALLQIVRQRERLYHLQDLVCIRCNQVKAAHLAEQCACAGSFRCKEDASDFRSKMQIFLN 1967
              +L ++++    Y+ QDLVC  CN +K+ H    C C   F  + + +++   ++I  N
Sbjct: 2826 LKILSLLQETFDAYNAQDLVCNNCNAIKSFHRRPICKCGQIFTPRLEINNWMQTLEIVEN 2885

Query: 1968 IANRQGFQLLQECTS 1982
            +A+     LL +  +
Sbjct: 2886 LASMLNMPLLTDVLT 2900


>gi|221483633|gb|EEE21945.1| DNA polymerase epsilon catalytic subunit, putative [Toxoplasma gondii
            GT1]
          Length = 2769

 Score =  775 bits (2002), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 487/1356 (35%), Positives = 722/1356 (53%), Gaps = 151/1356 (11%)

Query: 178  KREQRPQDFLDCIVDLREYDVPYHIRFAIDNDVRCGQWYDVSISSTG---PL-LEKRVDL 233
            +++Q+ +D    I D+ E DV Y  R  ID  +RCG W+DV  SS+    P+ L    + 
Sbjct: 147  RKKQQGEDVTALIEDIFEADVLYITRCCIDLKLRCGLWHDVQRSSSALASPVALTPLPNC 206

Query: 234  LQRAEVHVCAFDIETTKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYT 293
                 + V A+DIE +K PLKFPD++ D +++ISYM +GQGYLI+NR+ + EDI   E+ 
Sbjct: 207  ATAPPLRVLAWDIECSKQPLKFPDSNTDNVILISYMFNGQGYLIVNRQWLSEDIHPFEFR 266

Query: 294  PKPEFEGY--FKVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGF 351
             K   EG   F + N   E ELL  +  H+ +++P I  TYNGD FD+PF+  R   +G 
Sbjct: 267  AKKGMEGAGPFIIFNEKGEKELLSRFVQHVLKLRPHILATYNGDTFDFPFVYKRGELNGL 326

Query: 352  KMSEELGFQCDKNQGECRAKFA-CHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEV 410
                  G     +    +   A  H+DCF WV+RDSYLPQGS+ LK V K KL ++P+EV
Sbjct: 327  DFISSFGITPFTSDNSFQGNSALIHIDCFKWVERDSYLPQGSRTLKLVCKEKLRFNPVEV 386

Query: 411  NPEDMVRFAKEKPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGT 470
            +PEDMV  A  +PQ +A YSVSDAVAT++LY  Y+H FI +L TIIPM+P+ VLR+GSGT
Sbjct: 387  DPEDMVPLALNRPQELAVYSVSDAVATFFLYEKYIHNFILALCTIIPMTPEYVLRQGSGT 446

Query: 471  LCEMLLMVQAYKANVICPNKHQSDPEKFYRN------HLLESETYIGGHVECLESGVFRS 524
            LCE LLM +A   NV+ PNKHQ    +++R+      HL+  ++Y+GG VE L+ G+FR+
Sbjct: 447  LCEQLLMAEAAGRNVLFPNKHQHRYLQYWRDEKSKKMHLVLEDSYVGGRVESLKCGIFRN 506

Query: 525  DLPTSFKLDPSAYEQLLNNLDRDLQYAIKVE-----GKMDLESVSNYDEVKNAIMEKLLR 579
            DL  +F LD  AY+ L++ LD  L + +  E       +  E   ++   +  I+E+L  
Sbjct: 507  DLEETFTLDSDAYQFLIDTLDETLLFWLDQENGSSSSPLTPEDFPDWQVHREDILERLTS 566

Query: 580  LQEEPIREECPLIYHLDVAAMYPNIILTNRLQPPSIVTDEVCTACDFNRPGKTCLRKLEW 639
            L++  +    P+IYHLDV+AMYPNIILT+RLQPP++V +E C+ C F++    C R++ W
Sbjct: 567  LRDSRVLRCLPVIYHLDVSAMYPNIILTHRLQPPAMVDEEYCSQCPFSKEAPQCQRRMTW 626

Query: 640  VWRGEIFMGKRSDYYHLKKQIESEFVD--------------------------------- 666
              + E+   ++     L+++++ +  D                                 
Sbjct: 627  RRKLEVSPAEKGHILPLQQKLQMKLFDVASSDRREKQQSPKEEAREDEDTESEEEWDEEG 686

Query: 667  -----GTNGHLS-----------KSFLDLPKMEQQSRLKDRLKKYCQKAYKRV-LDKPVT 709
                 G  G              K++ +L + ++   L   +K +  KAYK+  + K V 
Sbjct: 687  AKKKRGRGGFARSEETEAARASRKTWTELTEKQKHMELIKVVKDFSLKAYKKTKVQKEVD 746

Query: 710  ELREAGICMRENSFYVDTVRSFRDRRYEYKGLNKVWKGKLSEAKASGNSIK-IQEAQDMV 768
            +  EA +C REN FYVDTVR+FRDRRY +K   K  +    + +  G S +  ++A D++
Sbjct: 747  Q--EAIVCQRENPFYVDTVRAFRDRRYIFKRRLKAAERLREKLEKEGGSFQEKKDADDVI 804

Query: 769  VLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLE 828
            +L DSLQLAHKCILNSFYGYV R  ARWYSM+M  VVT  GA IIQ A+ +I+ +G  +E
Sbjct: 805  LLNDSLQLAHKCILNSFYGYVKRDAARWYSMQMGAVVTKAGADIIQGAKNMIDGLGVTME 864

Query: 829  LDTDGIWCVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSK 888
            LDTDGIWC+LP  FP+ + F  K   K+    +P  +LN DV R  TNDQY    D  S+
Sbjct: 865  LDTDGIWCMLPQKFPQKYMFLDK-TGKEFRFEFPTTILNQDVHRRYTNDQYLDF-DEDSR 922

Query: 889  TYETHSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGEL 948
            T++  +   + FE+DGP++AM LPAS++   L+KKRY +F  DGT++ELKGFE+KRRGEL
Sbjct: 923  TFKRQTRNEVYFELDGPWRAMFLPASEKSDDLLKKRYVIFALDGTISELKGFEVKRRGEL 982

Query: 949  KLIKVFQAELFDKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSE-LIDYISESST 1007
            ++IK+FQ E+F K + G T EE Y A AAVA R+ DLL +QG  + D E L + I     
Sbjct: 983  QIIKLFQTEVFPKLIEGKTKEEAYGAAAAVAYRYRDLLTSQGVSVQDDEDLEELIVTKKV 1042

Query: 1008 MSKSLADYGEQKSCAVTTARRLSDFL-GDTMVKDKGLRCQYIVACEPQGTPVSERAVPVA 1066
            + K +   G  KS ++TT +RL++ L  +T + D  +  QYIV   P G   + RAVPV 
Sbjct: 1043 LGKPVVSQGLGKSMSITTGKRLAELLRNETYLTDAPVSTQYIVVNRPVGVEKTARAVPVQ 1102

Query: 1067 IFETDAEIMKFYLRKWCKTS---------------------------SDVGIRSIVDWSY 1099
            +F +  E   FY  KW   S                           + + IR ++DWSY
Sbjct: 1103 LFHSSPETKAFYYHKWLGISPSSVASFSSSSGEITGDASGSASTHALASIDIRQLIDWSY 1162

Query: 1100 YKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLYKKVREKEDKFRQRKLVDIF----- 1154
            Y +RL    QKI+ IPA  Q + NP+P V  P+WL K+  +  +   Q K+   F     
Sbjct: 1163 YSERLDVQFQKILCIPAMRQGLPNPIPEVAVPEWLKKQ--QATNNPLQSKMEHFFKWKKH 1220

Query: 1155 -----SSLKKDDFLNKTCNAETNLMDENVEDLEDFPKKRRNSVNGPRPIVRCFEVNNEQK 1209
                 +  +K+D   +  + +     E   D+E+ P+   N + G R   R  ++  EQK
Sbjct: 1221 AAPATTETQKEDRQERAESGDLFADGEAAVDVENIPEV--NCMQGSRLETRASQLPEEQK 1278

Query: 1210 TVKTTDQVDSLRQQLEPSEVSDQQPSSQNAIDTENIDRIVDYKGWLELKKRKWKDNLDRR 1269
             ++   +    + + +  E    +                D   W+  +K+KWK   +R 
Sbjct: 1279 GLQARREERERQMEQKQEEKRMWKH---------------DIVAWVAAQKQKWKQQRERL 1323

Query: 1270 KKQKLGSLRASHQ-ANGVSESLGDMINHKEAQRRTGVGSYFRRQETAMTRCHWQIIQ-LV 1327
            ++ +  +L A  +   G++ ++    N   A+     G         +T+  W ++   V
Sbjct: 1324 RQSRARALSAVQRLPAGLTPAILTR-NPGAAKLMKHWGLSLHDVALLLTQ-PWHLLDFFV 1381

Query: 1328 PSSQSGVFLAWVVVEGI--MVRIPITVPRLFYLNSKDPIVEKFPGRRVNK---------- 1375
             S   G+F   V  +       +P+ V R  +LN+K  I E    R +            
Sbjct: 1382 DSRDPGLFFCRVATDASRGFYTVPVQVYRQVFLNTKREIGELLQDRNILSPDADISLKPL 1441

Query: 1376 ----TLPHGRRSFNLIEVMIDEDQFRKESKKLAALL 1407
                 LP G R   L+E+ + E  F++E  KL +L 
Sbjct: 1442 RGVYALPRGVRQHELVEMSMPESLFQREKNKLPSLF 1477



 Score = 60.1 bits (144), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 40/168 (23%), Positives = 85/168 (50%), Gaps = 10/168 (5%)

Query: 1519 DQDMNSGPYNNELCGFDETTSSAPA-FRVVKQLIQRCLTDAVT-SGNVFADAILQHL--- 1573
            ++D ++   +  L  F  TT   PA FR + + +++   D  +  G V   ++++HL   
Sbjct: 2119 EKDYDADGPDESLADFHSTTQFHPAAFRTLGRSLEKLYRDLSSLRGRVTYPSVVRHLVAL 2178

Query: 1574 ----YRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEF-RKLGATIIFANFSKVIIDTG 1628
                Y W+CSP S L DP LH+ + +     F++ L+E   +   +++FAN  ++++ T 
Sbjct: 2179 PNFFYSWVCSPESLLFDPALHQKVLRYCTVYFSLFLSELSERRNLSVVFANPRRLLVATP 2238

Query: 1629 KFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLFMDQYNYGG 1676
               LS  + +  S++  L +  LF+ + +     + +++ +D  ++ G
Sbjct: 2239 HVLLSEGEKHLKSIICHLHSNTLFDALPVTVSSAFVAVVQLDASSWIG 2286



 Score = 51.6 bits (122), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 34/134 (25%), Positives = 53/134 (39%), Gaps = 9/134 (6%)

Query: 1854 FRDPCPSFILPNVICSYCNDCRDLDL---------CRDMALLAQDWHCAMPQCGQPYDRE 1904
            +R P  S  L +V C  C    D+DL           +   L     C  P+CG+ +   
Sbjct: 2617 WRSPLKSLSLRDVECGACRTVDDVDLLLCIREEQEALENGELVDFKTCNCPRCGEAFPDA 2676

Query: 1905 VMENALLQIVRQRERLYHLQDLVCIRCNQVKAAHLAEQCACAGSFRCKEDASDFRSKMQI 1964
            ++E  L + V ++   Y  QD  C  CN V A +   +C C    R +    D+   ++ 
Sbjct: 2677 LIEAHLYRAVGEKYYAYAAQDHPCSSCNAVNALYRRSKCRCGKPLRARLKEEDWEEFIES 2736

Query: 1965 FLNIANRQGFQLLQ 1978
                A   G+  LQ
Sbjct: 2737 VQEFAVEMGYDKLQ 2750


>gi|221057720|ref|XP_002261368.1| DNA polymerase epsilon, catalytic subunit [Plasmodium knowlesi strain
            H]
 gi|194247373|emb|CAQ40773.1| DNA polymerase epsilon, catalytic subunit,putative [Plasmodium
            knowlesi strain H]
          Length = 2856

 Score =  772 bits (1994), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 470/1271 (36%), Positives = 699/1271 (54%), Gaps = 148/1271 (11%)

Query: 174  ILTGKREQRPQDFLDCIVDLREYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLLEKRV-- 231
            I T K+    ++ L  I ++ EYDV Y  R  ID ++RCG WY ++        E     
Sbjct: 276  INTKKQILSKEEILQEITEIYEYDVKYTTRICIDQNIRCGLWYRITRDEDELYTETEAVH 335

Query: 232  -DLLQR---AEVHVCAFDIETTKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDI 287
             ++L +   A ++V A+DIE  K  LKFPD + D I++ISYM + QGYLI+NR  + ++I
Sbjct: 336  FEVLNKKVLAPLNVLAWDIECYKDELKFPDKEKDEIILISYMYNAQGYLIVNRNVMSKNI 395

Query: 288  EDLEYTPKPEFEG--YFKVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETR 345
             +  Y P  E+ G   FK+ N  NE  LL+ +  H++ +K  I+VTYNGD+FD P+L  R
Sbjct: 396  REFLYKPNEEYSGAGTFKIFNEQNEYFLLKRFLEHIRILKIHIFVTYNGDFFDIPYLFRR 455

Query: 346  AAHHGFKMSEELGFQCDKNQGECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGY 405
               +   + +E+GF  +  + EC   F  ++D + WV+RDSYLP GS+ LK+V K KL Y
Sbjct: 456  CEINNLSVPKEIGFIMNYTKQECACNFILNIDAYKWVERDSYLPNGSRTLKSVCKIKLKY 515

Query: 406  DPLEVNPEDMVRFAKEKPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLR 465
            +P EV+PE MV  AK+ PQ +A YSVSDAVAT+YLY  ++H F+F+L +IIPM+PD VLR
Sbjct: 516  NPTEVDPELMVSIAKKNPQHLAVYSVSDAVATFYLYDKFIHNFLFALCSIIPMNPDNVLR 575

Query: 466  KGSGTLCEMLLMVQAYKANVICPNKHQSDPEKFY------RNHLLESETYIGGHVECLES 519
            +GSGTLCE LLM +AYK N++ PNK +    +++      + + +  ++++GG V+ L+ 
Sbjct: 576  QGSGTLCEQLLMAEAYKKNILFPNKFKPAYNQYFTDVESKKKYFIYDDSFVGGTVQSLKC 635

Query: 520  GVFRSDLPTSFKLDPSAYEQLLNNLDRDLQYAIKVE----------GKMDLESVSNYDEV 569
            G++R DL   F LD   Y+ L+ N+D  + + ++ +            ++   + N  ++
Sbjct: 636  GIYRDDLKEHFNLDVDTYKYLVENVDNIIDFWVQKDLNKNCSPSDPKYINKNQIINLKQI 695

Query: 570  KNAIMEKLLRLQEEPIREECPLIYHLDVAAMYPNIILTNRLQPPSIVTDEVCTACDFNRP 629
            KN I++KL      P    CP IYHLDVAAMYPNIIL++RLQP +IVT + C  C F + 
Sbjct: 696  KNDIIDKLNFFIHNPSISICPNIYHLDVAAMYPNIILSHRLQPNAIVTQDHCFNCSFYKQ 755

Query: 630  GKTCLRKLEWVWRGEI-------------------FMGKRSDYYHLKKQIESEFVDGTNG 670
               C +++ W  + EI                   F  ++S Y+ +  + ES+     N 
Sbjct: 756  RHLCQKQMVWKRKLEISPIDYGHVLSLMQDLKTRLFYPQKS-YFKMNNKEESDSSTNENS 814

Query: 671  -----HLSKSFLDLPKMEQQSRLKDRLKKYCQKAYKRVLDKPVTELREAG-ICMRENSFY 724
                    KS+ +L + +Q   L   +K+  Q+ +K+   K   E+  +  +C REN FY
Sbjct: 815  ADVPLSKKKSWNELTEKQQHDELMIVIKECSQRVFKKT--KVAKEVDASSLVCQRENPFY 872

Query: 725  VDTVRSFRDRRYEY-KGLNKVWKGKLSEAKASG-NSIKIQEAQDMVVLYDSLQLAHKCIL 782
            VDTVR+FRDRRY Y KGL +    K    KA   + +KIQE  D ++L DSLQLAHKCIL
Sbjct: 873  VDTVRTFRDRRYVYKKGLKECEHEKKELLKAKKIDYMKIQELDDKILLNDSLQLAHKCIL 932

Query: 783  NSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLPGSF 842
            NSFYGYV RK +RWYS +M  +VTYTG++II  A  LI KIG P+ELDTDGIWC+LP  F
Sbjct: 933  NSFYGYVKRKSSRWYSDQMGAIVTYTGSQIINGAFNLINKIGIPVELDTDGIWCMLPKKF 992

Query: 843  PENFTF------KTKDLK----------------KKLTISYPCVMLNVDVARNNTNDQYQ 880
            PE +        +  ++K                KK+   +P  +LN ++ +  TN QY 
Sbjct: 993  PEIYDMYIVEKSRLNNMKEYEDKTEEELKNDASVKKVEFEFPTNILNFEMHKKWTNHQY- 1051

Query: 881  TLVDPVSKTYETHSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGF 940
             + +  +  YE  S+  I FE+DGP+  M LPAS++   L+KKRY VFND   ++ELKGF
Sbjct: 1052 LIYNENTDDYECISKNEIFFELDGPWHGMFLPASEKSDELLKKRYVVFNDKYKISELKGF 1111

Query: 941  EIKRRGELKLIKVFQAELFDKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDI-ADSELI 999
            EIKRRGEL++I+ FQ+E+F+ FL G T EE Y   +  AN+W +L+D++  DI  D EL 
Sbjct: 1112 EIKRRGELRIIQKFQSEIFNHFLKGKTKEESYYYASLTANKWKNLIDSKAVDIDNDDELF 1171

Query: 1000 DYISESSTMSKSLADYGEQKSCAVTTARRLSDFLGDT-MVKDKGLRCQYIVACEPQGTPV 1058
            D I     ++KS+ +    KS  +TTA+RLS+ L +T  V+D  +  Q+IVA +P G+ +
Sbjct: 1172 DLILAKKVLNKSVKEQPNAKSFGITTAKRLSELLCNTSYVEDNNVSTQFIVASKPIGSDI 1231

Query: 1059 SERAVPVAIFETDAEIMKFYLRKWCKTS----SDVGIRSIVDWSYYKQRLSSAIQKIITI 1114
            + RA+P+ IF+T+ E    YL KW   +      V +R I+DW YYKQ+L   I K++ I
Sbjct: 1232 TFRAIPIQIFKTNVETQIHYLGKWLGVTFPPDVPVNVRDIIDWDYYKQKLEVQILKLVII 1291

Query: 1115 PAAMQKVSNPVPRVVHPDWLYKKVREKEDKFRQRKLVDIF--SSLKKDDFLNKTCNAETN 1172
            PA  Q ++NP+  +  P+WL K++   E K  Q+K+   F   ++KK+   N   N+ T 
Sbjct: 1292 PAIKQNINNPITSISVPEWLKKQINISEGK--QKKITAFFVKKNVKKECISNDEANSSTP 1349

Query: 1173 L---MD--ENVEDLE-DFPKKRRNSVNGPRPIVRCFEVNN--EQKTVKTTDQVDSLRQQL 1224
            L   MD  EN + L+ D P  R      P  +   F   N   +   K    V S ++ L
Sbjct: 1350 LKGEMDEQENEKKLKVDDPSLRSLEKKSPFQVDATFTAMNISSESLHKDAPPVGSKKRSL 1409

Query: 1225 EP------------------------------SEVSDQQPSSQNAIDTENIDRI------ 1248
            +                               S +  +  S  N +D  N+  I      
Sbjct: 1410 DECLLENFISKRKKLGQLHDNSMAALTHGNSGSMIYKKVNSFDNYLDNNNVIIINHEKIS 1469

Query: 1249 ------------VDYKGWLELKKRKWKDNLDRRKKQKLGSLRASHQANGVSESLGDMINH 1296
                         D+K W+++  R WK+N     + ++  +R   ++      LGD    
Sbjct: 1470 NLKYTELLEIFQTDFKKWMQINSRIWKNN-----RSQIRKIRNEDKSKRKKYPLGDEEED 1524

Query: 1297 KEAQRRTGVGS 1307
            ++ +++TG  S
Sbjct: 1525 QQGRKKTGANS 1535



 Score = 65.5 bits (158), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 41/146 (28%), Positives = 77/146 (52%), Gaps = 9/146 (6%)

Query: 26  ELEAKLGYDLFSEGDKRLGWLLTFASSSL----EDEDTRKVYSCIDLYFVSQDGSTFKSK 81
           +LE K     +    ++ G+L     + L    ++ +  +  + + +YFVS +  T++  
Sbjct: 27  KLENKFNIKPWLSKGQKEGYLYNIVPTVLNVVVKNSNKSQKKTGVHMYFVSDNNKTWRLT 86

Query: 82  YKFRPYFYAATKEKMEMD-VEAYLRRRYESQIADIEILEKEDLDLKNHL----SGLHKSY 136
             +RPYFY  TK     + V  YLR+  +    +I+ ++KEDL L +HL    S L   +
Sbjct: 87  MFYRPYFYLKTKNIHNYEAVTKYLRKELDKYNVEIDYVKKEDLSLYDHLNKKRSYLSNIF 146

Query: 137 LKISFDTVQQLMDVKKDLLHVVERNQ 162
            K+SFDT++ L++ +  +  ++ERN+
Sbjct: 147 FKLSFDTIENLLNARDFISKIIERNK 172



 Score = 64.7 bits (156), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 30/130 (23%), Positives = 61/130 (46%), Gaps = 8/130 (6%)

Query: 1854 FRDPCPSFILPNVICSYCNDCRDLDLCRDMALLAQD------WHCAMPQCGQPYDREVME 1907
            ++ PCP  IL ++ C  C+    +++   +     +      W C    C   YD + +E
Sbjct: 2717 WKSPCPELILKDIFCENCSSVYHMNVVTSLVEAEINGKPSFIWLCK--NCNSKYDNDFIE 2774

Query: 1908 NALLQIVRQRERLYHLQDLVCIRCNQVKAAHLAEQCACAGSFRCKEDASDFRSKMQIFLN 1967
              +L ++++    Y+ QDLVC  CN +K+ +    C C  +F  + D ++++  ++I  N
Sbjct: 2775 LKILSLLQETFDAYNAQDLVCNNCNAIKSFYRRAICKCGQTFTPRLDITNWKRTLEIMEN 2834

Query: 1968 IANRQGFQLL 1977
            +       +L
Sbjct: 2835 LGTMLNMPIL 2844


>gi|429329897|gb|AFZ81656.1| DNA polymerase epsilon, catalytic subunit a, putative [Babesia equi]
          Length = 2293

 Score =  768 bits (1984), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 447/1208 (37%), Positives = 676/1208 (55%), Gaps = 131/1208 (10%)

Query: 64   SCIDLYFVSQDGSTFKSKYKFRPYFYAATKEKMEMDVE-AYLRRRYESQIADIEILE--- 119
            S + LYFVS DGS + +   + PYFY +  +   +DV   +L  +++S      +LE   
Sbjct: 69   SALSLYFVSDDGSEWHTSIIYAPYFYVSITDPGCVDVTLQFLYNKFKSHSIGPVLLEPCT 128

Query: 120  KEDLDLKNHLSGLHKS----------YLKISFDTVQQLMDVKKDLLHVVERNQAK----- 164
            K DL L NHL  +  +           ++I F TV QL +  +DL+  ++R   K     
Sbjct: 129  KIDLSLPNHLEKIDPTDGTSKHNIGQLIRIYFSTVDQL-ERGRDLIVGLKRQFEKEIALH 187

Query: 165  --------FDAAE-----------------------AYESILTGKREQ------RPQDFL 187
                    +D A                        AY+     K E            +
Sbjct: 188  TDLSSTLGYDPANESSVKSAFSESFLYNDSENSLNLAYQDSWKYKNEHFEGKKYNTNPSI 247

Query: 188  DCIVDLREYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLLEKRVDLLQRAEVHVCAFDIE 247
              I D+ EYD+ Y  R  ID  +RCG WYDV  +     L +++ +   A ++V A+DIE
Sbjct: 248  SNIGDIYEYDIKYVNRVCIDLSIRCGTWYDVERNGYDVKL-RQLSITSVAPLNVLAWDIE 306

Query: 248  TTKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGY--FKVT 305
              K PLKFPD + D I++IS + +GQGYLI+NR  V +DI +  Y P  +  G   FK+ 
Sbjct: 307  CYKAPLKFPDMETDEIILISVVFNGQGYLIVNRSVVAKDILEFSYQPSEDMIGTASFKIF 366

Query: 306  NVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDKNQ 365
            N  NE++LL+ +F  +  +KP I VTYNGD FD+P++  R+  +G  + + LGF    + 
Sbjct: 367  NEANELDLLQRFFNLILALKPHIVVTYNGDNFDFPYVSRRSEINGIPIGKVLGF-FHSSS 425

Query: 366  GECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQM 425
            G        ++DC+ WV+RDSYLP GS+ LK V K  L Y+P+E++PEDMV FA+  PQ 
Sbjct: 426  GLFTNSAILNMDCYKWVERDSYLPFGSRTLKQVCKLMLKYNPVEIDPEDMVHFARSAPQK 485

Query: 426  MASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANV 485
            +A YSVSDAVATY+L++ ++H FIF+L +I+P+ P++ LR+G+GTLCE LLM +AY  N+
Sbjct: 486  LAVYSVSDAVATYFLFIKFIHNFIFALCSIVPLPPNDTLRQGTGTLCENLLMAEAYSNNI 545

Query: 486  ICPNKHQSDPEKFYRN------HLLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQ 539
            + PNKH     ++Y N      HL+   +YIGG VE L  G+FR D    FKL+ ++Y+ 
Sbjct: 546  LFPNKHTQKSIRYYTNPDTDKQHLIYENSYIGGRVESLRCGIFRDDQAEQFKLNSASYQM 605

Query: 540  LLNNLDRDLQYAIKVEGKMDLESV--------------------------SNYDEVKNAI 573
            L++ ++  L Y  K     D+E++                           N++EV   +
Sbjct: 606  LIDTIEETLLYWAKNNIDGDIETLICDEDVSSSNIDFAPSEKLCRIFSKFENFNEVYRDL 665

Query: 574  MEKLLRLQEEPIREECPLIYHLDVAAMYPNIILTNRLQPPSIVTDEVCTACDFNRPGKTC 633
              +L  L++ P+ +  P IYHLDV AMYPNII++ RLQP +IVT++ C  C + +    C
Sbjct: 666  YTRLCTLRDNPMIKTFPRIYHLDVGAMYPNIIISQRLQPTAIVTEDFCRKCSYYKESLLC 725

Query: 634  LRKLEWVWRGEIFMGKRSDYYHLKKQIESEFVDGTN-----------------------G 670
             +K+ W  R EI    +S    L + ++      TN                        
Sbjct: 726  QKKMNWKQRLEISPIDKSQILILAQDLKGRAYKSTNIQYNNTIKDEDTESEEDEIETISK 785

Query: 671  HLSKSFLDLPKMEQQSRLKDRLKKYCQKAYKRVLDKPVTELR-EAGICMRENSFYVDTVR 729
              ++++  L + E+ + L+  +K Y QK +K+   K   E+  E+ IC REN FYV TV 
Sbjct: 786  STNRTWYQLNERERGAELQKAVKLYSQKIFKK--SKINREIDVESIICQRENPFYVQTVS 843

Query: 730  SFRDRRYEYKGLNKVWKGKLSEA--KASGNSIKIQEAQDMVVLYDSLQLAHKCILNSFYG 787
            +FRDRRY YK L K  + +L +   + + +S+KI++A++ +++ DSLQLA+KCILNSFYG
Sbjct: 844  TFRDRRYTYKHLKKEGENELKQLLRELNPDSVKIKQAREKILINDSLQLAYKCILNSFYG 903

Query: 788  YVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLPGSFPE--N 845
            YV R G+RWYSMEM  +VT+ GA II +AR LIE +G P+ELDTDGIWC+LP  FP   +
Sbjct: 904  YVKRAGSRWYSMEMGAIVTFAGASIIDSARKLIENVGIPIELDTDGIWCMLPDIFPAVLD 963

Query: 846  FTFKTKDLKKKLT-ISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEFEVDG 904
              F + +   K+  + Y   +LN+ +A+  TNDQY  L + + K Y T     I FE+DG
Sbjct: 964  LKFGSGESAGKIKELEYMTTVLNMLIAKKWTNDQYLEL-EEIGK-YRTTRRNEIAFELDG 1021

Query: 905  PYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFLH 964
            P+ AM LPAS++   L+KKRY V+N    + ELKGFEIKRRGE+++I++FQ ++F ++L 
Sbjct: 1022 PWHAMFLPASEKSEELLKKRYVVYNHQNKIVELKGFEIKRRGEMRMIQLFQEDIFPQYLL 1081

Query: 965  GSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLADYGEQKSCAVT 1024
            G T ++ Y   A VA  +  +LD++   + + ++ D +    T+ K +      K    T
Sbjct: 1082 GKTKDDAYKNAAKVALCYRQILDSRAAGLVEDDMFDLLVAKKTVKKPVNQQPALKCFGTT 1141

Query: 1025 TARRLSD-FLGDTMVKDKGLRCQYIVACEPQGTPVSERAVPVAIFETDAEIMKFYLRKWC 1083
            +A+RL++ F  DT + D  L   +++A  P+  P + RA+P+  F+ D+ +   +L KW 
Sbjct: 1142 SAKRLAELFKNDTYLNDGNLSMSFLLASHPEDAPRTSRAIPIQTFKVDSAVRSQFLSKWL 1201

Query: 1084 K---TSSDV-GIRSIVDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLYKKVR 1139
            K   + ++V   R I+DW YYK++L + I K+I +PA MQ V+NP+P +  P W+ KK  
Sbjct: 1202 KIQLSKANVSSARDILDWDYYKEKLDTQILKLICLPAIMQGVTNPIPHIDMPKWIKKKQS 1261

Query: 1140 EKEDKFRQ 1147
              E+K RQ
Sbjct: 1262 LAENKQRQ 1269



 Score = 48.1 bits (113), Expect = 0.051,   Method: Compositional matrix adjust.
 Identities = 106/556 (19%), Positives = 201/556 (36%), Gaps = 78/556 (14%)

Query: 1448 ILW-----ISDDGVPDLGGTSEED-ECFADEVHQPVLTYPGAYRKVSVELKIHH-LSVNA 1500
            ILW      SD GVP     +  D +   +E      T PG YR   V +  +  L  NA
Sbjct: 1752 ILWGTRDLSSDLGVPHFSNKTHSDFDIITNE--NLNFTVPGIYRGYGVNITFNQSLMYNA 1809

Query: 1501 LLKSNQVNEMEGGGLFGFDQDMNSGPY----------NNELCGFDETTSSAPAFRVVKQL 1550
            ++  ++   ++G   F     + S  Y          N+ L  F        AFR +   
Sbjct: 1810 IVLESK---LDGNIQFNNPNTLKSDEYKCYDEVQLDSNSHLSLFHPL-----AFRALGAT 1861

Query: 1551 IQRCL---------TDAVTSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVF 1601
            ++  +          D  T  N+    I   L  WL    + L+DP L+ +     QK  
Sbjct: 1862 LENLMKLTNLVFQKVDYGTFQNIVN--ICSFLKPWLSDAGAILYDPSLYAMAVMSTQKYL 1919

Query: 1602 AMLLAEFRKLGAT-IIFANFSKVIIDTGKFDLSAAKAYCDSLLKALQT-RELFEWIELEP 1659
              L+  F  +    +I+   + +++DT    ++  +      L+ L +    F  I   P
Sbjct: 1920 KKLIYHFSSVHKLRVIYVTSTSIVVDTNTTSITKGRNKIYEALEDLSSAHSKFRNI---P 1976

Query: 1660 VHFWHSLLFMDQYNYGGIPARADESLDDDSQVDIVSSWNIAEYLPKEIQDHFVLVVSEFM 1719
             H     + M Q +        D    D S+ +   +  + EYLP  ++      +    
Sbjct: 1977 FHVEEEFVAMAQLDNTYYIRYKD--YIDASKSNCSENLKVLEYLPCAVEMFIRYFIKTIA 2034

Query: 1720 YIP-WKHAQKLAASRAS------LQEGSSCTPSITVAAAENFESHIVQYVKGEISSYFTG 1772
              P W+  +K   +  +       QE      + ++   E  E HI+ +   +  ++F+ 
Sbjct: 2035 LDPLWQSLKKFYMNETTDDKQIGQQEPLELINTDSLDIQEQIEKHII-HDWHQPGTHFS- 2092

Query: 1773 KLLSIVRDAIHHMKKMNNDQHNS-------PGVMQTAANIHKVDAP--LEFIKHVCAAFA 1823
            KL  I+ D    ++  +    +S       PG +    +  K++    L +I  +  A  
Sbjct: 2093 KLYDILSDNDSFLRMFDRSGSHSQLNFPALPGSIFEGKDCWKLETVKLLIYIIQIDRALD 2152

Query: 1824 LDQNVQHDVLVMRKNLLKYVRVREFAPEAEFRDPCPSFILPNVICSYCNDCRDLDLCRDM 1883
               N+ +     + + L  +          +  P     + ++ C  C    D+D+   +
Sbjct: 2153 WKNNILNTSFEEKIHQLFMLTGESEYVSKNWNPPMRKMEINSITCEKCFMVSDIDVVSGL 2212

Query: 1884 AL-------LAQDWHCAMPQCGQPYDREVMENALLQIVRQRERLYH---LQDLVCIRCNQ 1933
                     ++  W C +  C  P + + +E   ++I++  E ++H    QD +C  C  
Sbjct: 2213 TYIDDNDGNISYQWPCQI--CSDPLNSKQIE---VKIIQYLENIFHAQQAQDSICPDCKT 2267

Query: 1934 VKAAHLAEQCACAGSF 1949
            VK  +    C C   +
Sbjct: 2268 VKTVYRRRGCKCGKKY 2283


>gi|399218643|emb|CCF75530.1| unnamed protein product [Babesia microti strain RI]
          Length = 2276

 Score =  764 bits (1972), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 450/1191 (37%), Positives = 668/1191 (56%), Gaps = 126/1191 (10%)

Query: 62   VYSCIDLYFVSQDGSTFKSKYKFRPYFYAATKEKMEMD-VEAYLRRRYESQIADIEILEK 120
             +S + L+FVS+DG  + +     PYFY        +D V+ +L +  +  +   E + +
Sbjct: 55   TFSALKLFFVSEDGQDWFTNLVHLPYFYVGLSNDNYLDHVKHFLEQNVKGLV---EKVYR 111

Query: 121  EDLDLKNHL-------SGLHKSYLKISFDTVQQLMDVKKDLLHVVERNQAKFDAAEAYES 173
            EDL   NH+           +S+LKISF T+    D+ +  L  +   ++++  + AY++
Sbjct: 112  EDLSRPNHIKNPKLSKQATKRSFLKISFATI----DLLRQGLQYIRSIKSRYKDSNAYDT 167

Query: 174  I----------------LTGKREQRPQDF-LDCIV---DLREYDVPYHIRFAIDNDVRCG 213
                             L      +  DF  DC+    +  E DV Y  R  ID ++RC 
Sbjct: 168  SKLNNNACLRFSHVKQHLNNLCNDQFNDFNPDCLAYIDECYEADVRYITRVLIDKNIRCA 227

Query: 214  QWYDVSISSTGPLLE--KRVDLLQRAEVHVCAFDIETTKLPLKFPDADYDIIMMISYMLD 271
             WY+V I+ST  L     ++D      ++V A+DIE  K PLKFPD + D I++IS+M +
Sbjct: 228  SWYNVEIASTDNLTLSLNQIDRTILPPLNVLAWDIECYKAPLKFPDMEVDPIILISFMFN 287

Query: 272  GQGYLIINRECVGEDIEDLEYTPKPEFEG--YFKVTNVNNEIELLRLWFAHMQEVKPGIY 329
            GQGYL++NRE V  DIED  Y P  +  G   F+V N  NE  ++  +F  ++ +   I 
Sbjct: 288  GQGYLLVNREYVSHDIEDFSYKPNHDLSGAGTFRVFNEPNEYAIISRFFECVKNLGTHIL 347

Query: 330  VTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDKNQGECRAKFACHLDCFAWVKRDSYLP 389
            VTYNGD FD+P+L  RA  +  +    L    +      R++F  ++DC+ WV+RDSYLP
Sbjct: 348  VTYNGDNFDFPYLYRRAQINNVR--NPLANIKNMENKFTRSEF-LNMDCYKWVERDSYLP 404

Query: 390  QGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQMMASYSVSDAVATYYLYMTYVHPFI 449
             GS+ LK V + KL Y+P EV+PE+M+  A   PQ +A+YSVSDAVATYYLY+ ++H F+
Sbjct: 405  NGSRTLKQVCRIKLKYNPAEVDPEEMITLAINDPQTLATYSVSDAVATYYLYIKFIHNFV 464

Query: 450  FSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVICPNKHQSDPEKFYRN------HL 503
             +L+ IIP++ ++VLR+GSGTLCE LLM +AY   +I PNKHQS+   +Y++      HL
Sbjct: 465  LALSYIIPLAVEDVLRQGSGTLCENLLMAEAYAKEIIFPNKHQSESSSYYKDENTGKFHL 524

Query: 504  LESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQLLNNLDRDLQYAIK---------- 553
            +  ++Y+GG VE L  G++R DLP  F +D +AY+QL++N+   + +  K          
Sbjct: 525  IYDDSYVGGKVETLRCGLYRDDLPEQFTIDHNAYQQLIDNIAETISHWGKNLNPPKHCSC 584

Query: 554  ------------VEGKMD--LESVSNYDEVKNAIMEKLLRLQEEPIREECPLIYHLDVAA 599
                        + GKMD  L   +N  ++ + I  KL  L+        P + HLDV A
Sbjct: 585  SVDTLEHNESDLIVGKMDRNLHYFTNIRDIYDEIHSKLTDLKNAKQLYCLPKVIHLDVGA 644

Query: 600  MYPNIILTNRLQPPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEI-------------- 645
            MYPNIILT+RLQP +IV +E C+ C +      C ++++W  + EI              
Sbjct: 645  MYPNIILTHRLQPTAIVNEEFCSKCSYYSEAHECQKRMKWKRKIEISPIDHSHIMPILNE 704

Query: 646  -----FMGKRSDYYHLKKQIESE--------FVDGTNGHLSK--------SFLDLPKMEQ 684
                 +   +  +Y+    I SE          DG N +L K         +  L   EQ
Sbjct: 705  LKTRVYKPTQRKFYNSVTNIASEDDISDFGSDSDGENINLKKPEAKVTSVKWNQLSAKEQ 764

Query: 685  QSRLKDRLKKYCQKAYKRVLDKPVTELR-EAGICMRENSFYVDTVRSFRDRRYEYK-GLN 742
             + L   +K Y  K  ++   K V E+  E+ +C REN FYV+TV  FRDRRY +K  + 
Sbjct: 765  NTELMKAVKAYSLKTTQK--SKLVKEVEVESIVCQRENPFYVNTVLKFRDRRYVFKRNVK 822

Query: 743  KVWKGKLSEAKAS-GNSIKIQEAQDMVVLYDSLQLAHKCILNSFYGYVMRKGARWYSMEM 801
            +  + K +  ++S  + +K++E  + +++ DSLQLAHKCILNSFYGYV R G+RW+SMEM
Sbjct: 823  QAERIKHNILQSSVVDIVKLKEINESILINDSLQLAHKCILNSFYGYVKRNGSRWFSMEM 882

Query: 802  AGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLPGSFPENFTFK-------TKDLK 854
              +VT+TG++II+ AR LI+KIG  +ELDTDGIWC+LP  FP  F  +       T    
Sbjct: 883  GAIVTFTGSQIIEFARKLIDKIGIAIELDTDGIWCMLPEKFPFIFNLQYFVCTCGTNQKL 942

Query: 855  KKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEFEVDGPYKAMILPAS 914
             KLT  YP  MLN+ + +N  N QY    D +++ Y       +EFE+DGP+  M LPAS
Sbjct: 943  DKLTFEYPTNMLNLLIDKNWANTQYLEY-DELTEKYRIERHNHVEFELDGPWYGMFLPAS 1001

Query: 915  KEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFLHGSTIEECYSA 974
            ++   L+KKRY V+N    ++ELKGFEIKRRGEL+LI+ FQ E+F KF  G+T +E +S 
Sbjct: 1002 EKSEELLKKRYVVYNHQKCISELKGFEIKRRGELQLIQRFQEEIFGKFALGTTKQEAFSH 1061

Query: 975  VAAVANRWLDLLDNQGKDIADS-ELIDYISESSTMSKSLADYGEQKSCAVTTARRLSDFL 1033
             AAV  RW   LD++ K I+D  EL D +   S + KS+ +    K   +TTARRLS+ L
Sbjct: 1062 AAAVGIRWRRTLDDKAKCISDDMELFDLLMSKSVIKKSVLEQPNMKGFGITTARRLSELL 1121

Query: 1034 GDTM-VKDKGLRCQYIVACEPQGTPVSERAVPVAIFETDAEIMKFYLRKWCKTS----SD 1088
             + M ++D+ +  Q+++  +P     + RA+P+ +F ++      ++ KW K S    S 
Sbjct: 1122 NNPMYIQDRNVSTQFLITNKPSDADKTARAIPIQLFLSEDTTRHAFISKWLKVSLSQASQ 1181

Query: 1089 VGIRSIVDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLYKKVR 1139
            +  R I+DW YY+QRL   + K+I IP  +Q V NP+P +  PDWLY+K R
Sbjct: 1182 LNSRDILDWDYYRQRLDIQLLKLICIPCIIQGVPNPIPFIKIPDWLYRKER 1232



 Score = 41.6 bits (96), Expect = 4.7,   Method: Compositional matrix adjust.
 Identities = 18/81 (22%), Positives = 38/81 (46%)

Query: 1897 CGQPYDREVMENALLQIVRQRERLYHLQDLVCIRCNQVKAAHLAEQCACAGSFRCKEDAS 1956
            C +P+D+E +E  L+  + +     H Q+  C+ C+  + ++ +  C C   +    D +
Sbjct: 2185 CNEPWDQETIELKLIDYLEEFFYALHAQNFRCVYCSHARISYQSTNCNCGNVYADSLDIN 2244

Query: 1957 DFRSKMQIFLNIANRQGFQLL 1977
             +   ++I   IA    + LL
Sbjct: 2245 TWLYAVEIVRKIAKTNEYHLL 2265


>gi|84997449|ref|XP_953446.1| DNA polymerase epsilon (catalytic subunit) [Theileria annulata strain
            Ankara]
 gi|65304442|emb|CAI76821.1| DNA polymerase epsilon (catalytic subunit), putative [Theileria
            annulata]
          Length = 2210

 Score =  763 bits (1969), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 472/1276 (36%), Positives = 699/1276 (54%), Gaps = 160/1276 (12%)

Query: 64   SCIDLYFVSQDGSTFKSKYKFRPYFYAATKEKMEMDVE-AYLRRRYESQIADIEILE--- 119
            S + L+FVS+DG+ + +   + PYFY A   +  MD+   +L   + S      +LE   
Sbjct: 75   SALTLHFVSEDGAEWSTSLIYSPYFYIAVLREELMDIALQFLYNNFRSHSIGPVLLEPCR 134

Query: 120  KEDLDLKNHLS------GLHKSYL----KISFDTVQQLMDVKKDLLHVVER--------N 161
            + DL L NHL       G+ K  L    KISF T+ QL +  +D++  ++R        N
Sbjct: 135  RIDLSLPNHLEKVDPVEGVSKHNLAKLIKISFKTIDQL-ERGRDMITSLKRQFEKDNQIN 193

Query: 162  QAKFDAAEAYESILTGKREQRPQ---------------------------DFLDCIVDLR 194
            ++K +  E  E + +   + + Q                             L  I +L 
Sbjct: 194  ESKNEYDEFDEDVFSSNYQSKTQYDNFNTVSKDSEITVEGMGLSKKYASNSVLRIIGELY 253

Query: 195  EYDVPYHIRFAIDNDVRCGQWYDVSIS----STGPLLEKRVDLLQRAEVHVCAFDIETTK 250
            E+DV Y  R  ID  +RCG WY+V       S  PL +  V  L     +V A+DIE  K
Sbjct: 254  EHDVLYINRVCIDLGIRCGTWYEVRREDFNVSVTPLEKTSVPPL-----NVFAWDIECYK 308

Query: 251  LPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGY--FKVTNVN 308
             PLKFPD + D IM+IS M +GQGYLI+NR  V +DI +  Y P+ +  G   FK+ N  
Sbjct: 309  PPLKFPDMETDEIMLISVMFNGQGYLIVNRTIVSKDIAEFLYQPREDIVGNACFKIYNER 368

Query: 309  NEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDKNQGEC 368
             E +LL  +F  +  +KP I+VTYNGD FD+P++  RA  +G  M++  G        + 
Sbjct: 369  TERDLLMRFFYLINYLKPHIFVTYNGDNFDFPYVNRRAEINGIHMNKVSGLHLSSELFQH 428

Query: 369  RAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQMMAS 428
             A    ++DC+ WV+RDSYLP GS+ LK V K  L Y+P+E++PEDMV  A+  PQ +A 
Sbjct: 429  AA--ILNMDCYKWVERDSYLPFGSRTLKQVCKLMLKYNPVEIDPEDMVHLARVTPQKLAV 486

Query: 429  YSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVICP 488
            YSVSDAVATY+LYM ++H FI +L+ I+P++P+EVLR+G+GTLCE LLM QAY  N++ P
Sbjct: 487  YSVSDAVATYHLYMKFIHNFILALSYIVPLAPNEVLRQGAGTLCENLLMAQAYANNILFP 546

Query: 489  NKHQSDPEKFY------RNHLLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQLLN 542
            NKH     +FY      R HL+   TYIGG VE L  G+FR D   +F+L  S Y+ L+N
Sbjct: 547  NKHIQKAIRFYTNPETERQHLVYENTYIGGRVESLRCGIFRDDQAENFELSSSTYDDLIN 606

Query: 543  NLDRDLQY--------------------AIKVEGKMDLES-------------------- 562
            NL+  L Y                     +K    M++++                    
Sbjct: 607  NLENSLIYWAKHSKIINNIDEIDIISETPMKTNNPMEIDNSMETDNPVRTENSVGIPSER 666

Query: 563  -------VSNYDEVKNAIMEKLLRLQEEPIREECPLIYHLDVAAMYPNIILTNRLQPPSI 615
                     N+++V   +  +L RL++EP     P IYHLDV AMYPNII+T RLQP +I
Sbjct: 667  LRRIFSRFDNFEQVYKELCVRLGRLRDEPNVRTYPRIYHLDVGAMYPNIIITQRLQPTAI 726

Query: 616  VTDEVCTACDFNRPGKTCLRKLEWVWRGEI-------------------FMGKRSDYYHL 656
            V ++ C  C +    + C +++ W  R EI                   +      Y H 
Sbjct: 727  VDEKFCEKCSYYSESERCQKRMRWKQRLEISPIDKSQILVVMQNLKARTYQPSEIPYQHR 786

Query: 657  KKQIESEFVDGTNGHLS-----KSFLDLPKMEQQSRLKDRLKKYCQKAYKRVLDKPVTEL 711
            ++  E   VD            +++  L + E+ + L+  +K   QK +K+       ++
Sbjct: 787  EETFEDSEVDSDTQESELKPKVRTWEQLTEREKGAHLQRAVKACSQKIFKKTRIYKEADV 846

Query: 712  REAGICMRENSFYVDTVRSFRDRRYEYKGLNKVWKGKLSEAKASG--NSIKIQEAQDMVV 769
             E+ IC REN FYV TV++FRDRRY +K L K  + +L E   +G  + + I+  ++ ++
Sbjct: 847  -ESIICQRENHFYVQTVQTFRDRRYAFKHLKKEGENELKELIKNGCNDPVLIKSVREKIL 905

Query: 770  LYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLEL 829
            + DSLQLA+KCILNSFYGYV R G+RWYSMEM  +VTYTGA II +AR LIEKIG P+EL
Sbjct: 906  INDSLQLAYKCILNSFYGYVKRTGSRWYSMEMGAIVTYTGASIIDSARKLIEKIGIPIEL 965

Query: 830  DTDGIWCVLPGSFPE----NFTFKTKDLKKK--LTISYPCVMLNVDVARNNTNDQYQTLV 883
            DTDGIWC+LP  FP      +T  T + +KK  + + Y   +LN+ +A   TN+QY  L 
Sbjct: 966  DTDGIWCMLPDIFPAVLDLTYTVNTPEGEKKKSVELEYMTTVLNMLIAEEWTNEQYLDLE 1025

Query: 884  DPVSKTYETHSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIK 943
            +  S  Y T  +  I FE+DGP+ AM LPAS++   L+KKRY V+N +G + ELKGFEIK
Sbjct: 1026 E--SGRYVTVQKNEIFFELDGPWHAMFLPASEKSEELLKKRYVVYNHNGQIVELKGFEIK 1083

Query: 944  RRGELKLIKVFQAELFDKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYIS 1003
            RR E+++I++FQ ++F ++L G T E+ Y   A VA  +  +LD +  D+AD +L D + 
Sbjct: 1084 RRSEMRMIQLFQEDIFPQYLMGQTKEQAYQNAAKVAISYRKILDTRASDLADDDLFDLLL 1143

Query: 1004 ESSTMSKSLADYGEQKSCAVTTARRLSD-FLGDTMVKDKGLRCQYIVACEPQGTPVSERA 1062
               T+ K + +   QK   +T+ARRLS+ F  D+ + D  L   +++A +P   P + RA
Sbjct: 1144 SKKTVRKPVIEQPHQKCFGITSARRLSELFKNDSYLNDANLSMSFLLASQPTDAPRTARA 1203

Query: 1063 VPVAIFETDAEIMKFYLRKWCK----TSSDVGIRSIVDWSYYKQRLSSAIQKIITIPAAM 1118
            +P+  F+ D  +   +L KW K    T+  +  R I+DW+YYK+R+ + I K++ +PA M
Sbjct: 1204 IPIQTFKVDKTVRSQFLAKWLKIQLSTAMRMSSRDILDWNYYKERIDTQILKLVVLPAIM 1263

Query: 1119 QKVSNPVPRVVHPDWLYKKVREKEDKFRQRKLVDIFSSLKKDDF-LNKTC-NAETNLMDE 1176
            Q + NP+P+V  P W+ +K    ++K     +   F+++ ++    N T  N E  ++D+
Sbjct: 1264 QGLINPIPQVELPKWVKRKQSILDNK--HHTISSYFNTITQNIINTNHTVKNIENEIVDD 1321

Query: 1177 NVEDLEDFPKKRRNSV 1192
             ++ LE+  KK   SV
Sbjct: 1322 VIDWLEELKKKWIKSV 1337


>gi|11493740|gb|AAG35631.1| DNA polymerase epsilon [Xenopus laevis]
          Length = 1636

 Score =  761 bits (1965), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 394/800 (49%), Positives = 540/800 (67%), Gaps = 34/800 (4%)

Query: 622  TACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYYHLKKQIESE-FVDGTNGHLSKSFLDLP 680
             ACDFN+PG  C R++ W WRGE     RS+Y+ +++Q+ESE F     G   ++F +L 
Sbjct: 1    AACDFNKPGAACQRQMTWQWRGECMPASRSEYHRIQQQLESEKFPPLFPGKPPRAFHELT 60

Query: 681  KMEQQSRLKDRLKKYCQKAYKRVLDKPVTELRE--AGICMRENSFYVDTVRSFRDRRYEY 738
            + EQ    K RL  YC+KAYK++    VT L E    IC RENSFYVDTVR+FRDRRYE+
Sbjct: 61   REEQAKYEKKRLADYCRKAYKKI---HVTRLEEKVTTICQRENSFYVDTVRAFRDRRYEF 117

Query: 739  KGLNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHKCILNSFYGYVMRKGARWYS 798
            KGL+KVWK KLS A  SG++ +I+  ++M +LY+SLQLAHKCILNSFYGYVMRKGARWYS
Sbjct: 118  KGLHKVWKKKLSSASESGDAAEIKRCKNMEILYESLQLAHKCILNSFYGYVMRKGARWYS 177

Query: 799  MEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLPGSFPENFTFKTKDLKK-KL 857
            MEMAG+V YTGA II  AR L+E+IG+PLELDTDGIWCVLP SFPENF  K+ + KK K+
Sbjct: 178  MEMAGIVCYTGANIITQARELVEQIGRPLELDTDGIWCVLPNSFPENFVIKSTNAKKPKV 237

Query: 858  TISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEFEVDGPYKAMILPASKEE 917
            TI+YP  MLN+ V    TN QYQ L DP + TY T SE SI FEVDGPY AMILPASKEE
Sbjct: 238  TITYPGAMLNILVKEGFTNHQYQELSDPATLTYVTRSENSIFFEVDGPYLAMILPASKEE 297

Query: 918  GILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFLHGSTIEECYSAVAA 977
            G  +KKRYAVFN+DG+LAELKGFE+KRRGEL+LIK+FQ+ +F+ FL GST+EE Y++VA 
Sbjct: 298  GKKLKKRYAVFNEDGSLAELKGFEVKRRGELQLIKIFQSSVFEAFLKGSTLEEVYASVAK 357

Query: 978  VANRWLDLLDNQGKDIADSELIDYISESSTMSKSLADYGEQKSCAVTTARRLSDFLGDTM 1037
            VA+ WLD+L ++  ++ D+EL + ISE+ +MS+ L DYGEQKS +++TA+RL++FLGD M
Sbjct: 358  VADYWLDVLYSKAANMPDAELFELISENRSMSRRLEDYGEQKSTSISTAKRLAEFLGDQM 417

Query: 1038 VKDKGLRCQYIVACEPQGTPVSERAVPVAIFETDAEIMKFYLRKWCKTSS--DVGIRSIV 1095
            VKD GL C+Y+++ +P+G+PV+ERA+P+AIF+ +  + + YLRKW K  S  D+ IRSI+
Sbjct: 418  VKDAGLSCRYVISRKPEGSPVTERAIPLAIFQAEVGVKRHYLRKWLKNPSLQDLDIRSIL 477

Query: 1096 DWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLYKKVREKEDKFRQRKLVDIFS 1155
            DW YY +RL SAIQKIITIPAA+Q+V NPVPRV HPDWL+KK+ EK D ++Q+++ ++F+
Sbjct: 478  DWDYYIERLGSAIQKIITIPAALQQVKNPVPRVRHPDWLHKKLLEKNDIYKQKRINELFT 537

Query: 1156 SLKKDDFLNKTCNAETNLMDENVEDLEDFPKKRRNSVNGPRPIVRCFEVNNEQKTVKTTD 1215
            S  K     +    +++       D+EDF   +R     P        ++ ++K V T +
Sbjct: 538  SEGKRQITAQMQQPDSS----QTPDMEDFGVGKRLQPAVP--------ISTKRKRVPTAE 585

Query: 1216 QVDSLRQQLEPSEVSDQQPSSQNAIDTENIDRIVDYKGWLELKKRKWKDNLDRRK-KQKL 1274
            +     Q L  ++   +       + T   +R+V    WL   K+KW+    +RK +QK 
Sbjct: 586  ESQGDSQDLALTQSWREVLGQPPPLGTTKEERLV----WLRYHKKKWELQARQRKERQKK 641

Query: 1275 GSLRASHQANGVSESLGDMINHKEAQRRTGVGSYFRRQETAMTRCHWQIIQLVPSSQSGV 1334
              L     A G     G +I   +A    G+GS+ RR   ++    WQI+Q+  SSQ G+
Sbjct: 642  RRLEDGEVAPGA----GGVIRETQA---AGLGSFLRRTARSILDMPWQIVQIGESSQPGL 694

Query: 1335 FLAWVVVEGIMVRIPITVPRLFYLNSKDPIVEKFPG-RRVNKTLPHGRRSFNLIEVMIDE 1393
            F  W V+   +  I + +PRLFY+N + P  E+    R+VN+ LP     ++L E  + E
Sbjct: 695  FRLWAVIGNDLHCIKLNIPRLFYVNQRVPKPEEGAVYRKVNRILPRSNPVYHLYEYTVPE 754

Query: 1394 DQFRKESKKLAALLADPEVE 1413
            D +++   ++ A L+ P++E
Sbjct: 755  DMYQEHINEINADLSAPDIE 774



 Score =  328 bits (841), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 185/605 (30%), Positives = 310/605 (51%), Gaps = 62/605 (10%)

Query: 1442 LARYAHILWISDDGVPDLGGTSEEDECFA---DEVHQPVLTYPGAYRKVSVELKIHHLSV 1498
            L R+ H+LW+S    PDLGG   +D       DE     +  PG Y  V VEL I  L+V
Sbjct: 1027 LRRHNHLLWLSPSARPDLGGKEADDNRLVMEFDERASVEINNPGCYNTVCVELDIQSLAV 1086

Query: 1499 NALLKSNQVNEMEGGGLFG--FD-------QDMNSGPYNNELCGFDETTSSAPAFRVVKQ 1549
            N++L+S+ +N++EG G  G  FD       +DM +G   + +  +DET   +  FR++K 
Sbjct: 1087 NSILQSHHINDLEGAGSMGISFDVLQQASLEDMVTGNQASSVASYDETALCSNTFRILKS 1146

Query: 1550 LIQRCLTDAVTSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEFR 1609
            ++   + +     NV+AD  + H YRWL SP S L+DP LHR LH +M+K+F  L+AEF+
Sbjct: 1147 MVVGWVKEITQYHNVYADNQVMHFYRWLRSPSSLLYDPALHRTLHNMMKKLFLQLVAEFK 1206

Query: 1610 KLGATIIFANFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLFM 1669
            +LG+++++ANF+++I+ T K  +  A AY + + +++ +RE+F  + +     W  LL+M
Sbjct: 1207 RLGSSVVYANFNRIILCTKKRRVEDAVAYVEYITQSIHSREIFHSLTISVSRCWEFLLWM 1266

Query: 1670 DQYNYGGI------------------------------------PARADESLDDDSQVDI 1693
            D  NYGGI                                    P  +D+  +D  +  +
Sbjct: 1267 DPANYGGIKGKLPSSVHYGESAKKKKVQNGEEDDCSEEEEEEDQPVNSDDESEDQVEESL 1326

Query: 1694 VSSWNIAEYLPK--EIQDHFVLVVSEFMYIPW----KHAQKLAASRASLQEGSSCTPSIT 1747
             ++WNI +YLP+    Q +F+++VS ++   +    +  ++ A     ++   +   S  
Sbjct: 1327 ENNWNIVQYLPQTASCQSYFLMIVSAYIVAVYHSMREEMRRNAPGNTPIKRRQNSQVSQE 1386

Query: 1748 VAAAENFESHIVQYVKGEISSYFTGKLLSIVRDAIHHMKKMNNDQHNSPGVMQTAANIHK 1807
                      ++ + +  +++  T    +I +     +    N    S        +   
Sbjct: 1387 TNGDGGAMPGLITFSQDYVANELTQNFFTITQKIQKKVTGTRNATEPSEMFPSLPGSHLP 1446

Query: 1808 VDAP-LEFIKHVCAAFALDQNVQHDVLVMRKNLLKYVRVREFAPEAEFRDPCPSFILPNV 1866
            ++ P LEFIK+VC   ALD N+ + V  ++++LL+ V V EF+ +A+FRDPC S+ILP +
Sbjct: 1447 LNNPALEFIKYVCEVLALDSNITNQVNKLKRDLLRLVDVGEFSEDAQFRDPCRSYILPEI 1506

Query: 1867 ICSYCNDCRDLDLCRDMAL-----LAQDWHCAMPQCGQPYDREVMENALLQIVRQRERLY 1921
            IC  CN CRDLDLC+D AL     +   W C    C   Y+ + +E AL++ ++++   +
Sbjct: 1507 ICRSCNFCRDLDLCKDPALNQDGSVLPQWVCT--NCQAEYESDAIEMALVEALQKKMMAF 1564

Query: 1922 HLQDLVCIRCNQVKAAHLAEQCACAGSFRCKEDASDFRSKMQIFLNIANRQGFQLLQECT 1981
             LQDLVC++C  VK +++   C+CAG F           ++ +F NIA       L E  
Sbjct: 1565 TLQDLVCLKCKGVKESNMPVYCSCAGDFALTISVKALLEQINVFRNIAQHYNMAHLLETI 1624

Query: 1982 SWILE 1986
             WI++
Sbjct: 1625 VWIMQ 1629


>gi|269859732|ref|XP_002649590.1| DNA polymerase epsilon, catalytic subunit A [Enterocytozoon bieneusi
            H348]
 gi|220066953|gb|EED44422.1| DNA polymerase epsilon, catalytic subunit A [Enterocytozoon bieneusi
            H348]
          Length = 1787

 Score =  758 bits (1957), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 429/1118 (38%), Positives = 654/1118 (58%), Gaps = 69/1118 (6%)

Query: 26   ELEAKLGYDLFSEGDKRLGWLLTFASSSLEDEDTRKVYSCIDLYFVSQDGSTFKSKYKFR 85
            E+E K G+  +   DK+LGWLL +  +SL +           LYF+  D S FK K  + 
Sbjct: 9    EIEKKFGFSDYFGLDKQLGWLLNYQINSLGNTMEA------SLYFIKTDKSGFKIKVPYY 62

Query: 86   PYFYAATKEKMEMDVEAYLRRRYESQIADIEILEKEDLDLKNHLSGLHKSYLKISFDTVQ 145
            P F   T +     V  Y+ ++Y  +I  I I EK +    NHL+   K YLKI      
Sbjct: 63   PTFLLETTDNAA--VTEYMYKKYRKEIHKIIIREKVNTKDYNHLNIPKKQYLKIY----- 115

Query: 146  QLMDVKKDLLHVVERNQAKFDAAEAYESILTGKREQRPQDF---------LDCIVDLREY 196
                    +LH  + N+   D     ++I   KR+   + +          + I++  EY
Sbjct: 116  --------VLHENDLNRLIRDI----KTIFFNKRKSSNETYNIHDDDVEVTNKILNFYEY 163

Query: 197  DVPYHIRFAIDNDVRCGQWYDVSISSTGPLLEKRVDLLQRAEVHVCAFDIETTKLPLKFP 256
            D+P  I  A + + R G WYDV+      +++     +   ++ + A+DIET KLPLKFP
Sbjct: 164  DIPRDIAIADELNFRVGMWYDVAYDGENYIIQACATKILFPDLKIFAYDIETYKLPLKFP 223

Query: 257  DADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNVNNEIELLRL 316
            + D D I+MIS   +  GYLIINRE V +DI+   Y PKPE +  F V N  NE  LL  
Sbjct: 224  NPDNDPIIMISIRTESNGYLIINREYVSQDIKSFSYAPKPELKTEFIVYNEKNEEMLLTK 283

Query: 317  WFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDKNQGECRAKFACHL 376
            +    Q  KP +  T+NG++FD+PF+E R   H + +++  G Q  K      A +  HL
Sbjct: 284  FIELFQMHKPHVITTFNGEFFDFPFIEKRLKIHNYSLTQLTGIQ--KQVNSYSAPWTIHL 341

Query: 377  DCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQMMASYSVSDAVA 436
            DC+ WVKRDSYLP  SQGLK+ TKAKLGY P E++PEDMV+ A E PQ MASYS SDAVA
Sbjct: 342  DCYKWVKRDSYLPISSQGLKSATKAKLGYIPDEIDPEDMVKCAMECPQKMASYSASDAVA 401

Query: 437  TYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVICPNKHQSDPE 496
            TY+LY+ +VH  IFSL T+IP+ P ++L KGSG+LCE LL+ QA   +++ PN  Q    
Sbjct: 402  TYFLYIKFVHAHIFSLGTLIPLPPIKILSKGSGSLCEALLITQANLFDILIPNVPQEQSL 461

Query: 497  KFYRNHLLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQLLNNLDRDLQYAIKVEG 556
             +Y ++++E+ +YIGGHVE L++G+FR+D    F+ +      +++NLD   +       
Sbjct: 462  TYYDDYIIENTSYIGGHVESLKAGIFRADFFHLFEYNDEIIRLIIDNLDDIFE------- 514

Query: 557  KMDLESVSNYDEVKNAIMEKLLRLQEEPIREECPLIYHLDVAAMYPNIILTNRLQPPSIV 616
            K  LE    Y   K  I+ +L + +   I ++   IYH DV AMYPNIILTNRLQP S+V
Sbjct: 515  KYKLEET--YINEKQRIVSELNKCK-GTISDQGN-IYHFDVGAMYPNIILTNRLQPTSVV 570

Query: 617  TDEVCTACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYYHLKKQIE-SEFVDGTNGHLSKS 675
               +C  CD+N     C + L+W  R E +   R++  ++  Q++  EF +  N  +  +
Sbjct: 571  DPSICIRCDYNDENNNCKKVLDWTNRIEYYPLTRAEVNNIINQLDKQEFFNENNDKI--T 628

Query: 676  FLDLPKMEQQSRLKDRLKKYCQKAYKRVLDKPVTELREAGICMRENSFYVDTVRSFRDRR 735
            F +LP+ ++   +K  ++ Y +K   + +      +++  IC RE  FYV+T+++F+++R
Sbjct: 629  FKELPENQRTILIKKHVEMYSKKI-YKKIKYKKEIIKKTIICQREIPFYVNTIKTFKNQR 687

Query: 736  YEYKGLNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHKCILNSFYGYVMRKGAR 795
            Y  K   K ++  + E K +      ++  + +V+Y+SLQ+A+KC+LNSFYGYVMRKG+R
Sbjct: 688  YIMK---KKYQQSIKEFKLNPT----KDNMEQMVVYNSLQVAYKCVLNSFYGYVMRKGSR 740

Query: 796  WYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLPGSFPENFTFKTKDLKK 855
            W+S+E A +    G +II+ A+  +   G PLELDTDGIW ++P  FP   T        
Sbjct: 741  WWSIETAAITCKIGGEIIKLAKNFLSGFGIPLELDTDGIWTIIPKYFPNEITIGNTK--- 797

Query: 856  KLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEFEVDGPYKAMILPASK 915
               IS+   +LN  V  + TN QYQ  ++  S  Y+   + SI FE+DGPYK M++P+S 
Sbjct: 798  ---ISFLQEILNYFVCNSFTNTQYQEKLNDGS--YKISDQNSIVFEIDGPYKTMVIPSSI 852

Query: 916  EEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFLHGSTIEECYSAV 975
            EE  L+KK+Y V+N D  + E+KGFEIKR+GEL  IK FQ ++F +F  G+T+ ECY+ +
Sbjct: 853  EENKLLKKKYIVYNFDNQIIEIKGFEIKRQGELNFIKKFQEDIFQQFCSGNTLTECYTNL 912

Query: 976  AAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLADYGEQKSCAVTTARRLSDFLGD 1035
            +  AN WL++L  +G+ + D  L D   ES  MSKS+ DY ++KS  ++ AR+L++ LG+
Sbjct: 913  SNTANYWLNILLTKGQYVDDETLFDLFVESRNMSKSIDDYYDKKSNILSAARKLAEILGE 972

Query: 1036 TMVKDKGLRCQYIVACEPQGTPVSERAVPVAIFETDAEIMKFYLRKWCKTSSDVGIRSIV 1095
             ++K+K L+C++I++  P+   +++R +P+ IF++D +  + +L+KW        IR I+
Sbjct: 973  DILKEK-LKCEFIISKFPENLSIADRCLPLIIFKSDDK--ETFLKKWIGERESYQIRDII 1029

Query: 1096 DWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDW 1133
            DW YYK R +  +Q++I IPA +Q ++N +  + +  W
Sbjct: 1030 DWDYYKSRFTIVLQRLIIIPAHLQGLNNILTSIDNVKW 1067


>gi|156089253|ref|XP_001612033.1| DNA polymerase family B, exonuclease domain containing protein
            [Babesia bovis]
 gi|154799287|gb|EDO08465.1| DNA polymerase family B, exonuclease domain containing protein
            [Babesia bovis]
          Length = 2346

 Score =  756 bits (1953), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 455/1236 (36%), Positives = 674/1236 (54%), Gaps = 131/1236 (10%)

Query: 39   GDKRLGWLLTFASSSLEDEDTRKVYSCIDLYFVSQDGSTFKSKYKFRPYFYAATKEKMEM 98
            G  R+      +++S  D+ +R   + + +YFVS+D + + +   + PYFY +  +   +
Sbjct: 46   GSGRVAGSTLKSTTSDSDKVSR---TALSVYFVSEDCTEWHTTVLYAPYFYISVLDSSVV 102

Query: 99   D-VEAYLRRRYESQIADIEILE---KEDLDLKNHLSGLH----------KSYLKISFDTV 144
            D +  +L +++ S+     +LE   + DL L NH+  L           +  +K SF+T+
Sbjct: 103  DQLIDFLNQKFASKGVGPTLLEHCTRVDLSLPNHIERLDPLTGKPIHATRHLIKASFNTI 162

Query: 145  QQLMDVKKDLLHVVERNQAKFDAAEAYESILT---------------------------- 176
             QL +  + +L  + R + K +     ES  T                            
Sbjct: 163  DQL-ERARSVLQNLRRTKDKHNEDNVLESYNTSLPQGLTSLNTQYVNDDIDTVHRADHGN 221

Query: 177  ---GKREQRPQDFLD-------CIVDLREYDVPYHIRFAIDNDVRCGQWYDVSISSTGPL 226
               G   Q P+D +D        + D+ E+DV Y  R  ID  +RCG WYDV  +  G  
Sbjct: 222  SPRGTETQYPEDAVDRSQQIVQHLGDIYEHDVKYITRVCIDLGIRCGTWYDVERTHHGVD 281

Query: 227  LEKRVDLLQRAEVHVCAFDIETTKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGED 286
              K +D      ++V A+DIE  K PLKFPD + D I++IS M +GQGYLI+NR  V  D
Sbjct: 282  F-KALDKSTMPPLNVFAWDIECYKAPLKFPDMETDEIILISAMFNGQGYLIVNRSVVARD 340

Query: 287  IEDLEYTPKPEFE--GYFKVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLET 344
            I +  Y P  E    G F+V N   E ELL+ +F  +  + P I VTYNGD FD+P++  
Sbjct: 341  ISEFRYHPCDEMSGAGAFRVYNEPGEKELLQRFFKLVVSLAPHIIVTYNGDVFDFPYVRR 400

Query: 345  RAAHHGFKMSEELGFQCDKNQGECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLG 404
            RA  +G  M + LG                ++DC+ WV+RDSYLP GS+ LK V K KL 
Sbjct: 401  RAEINGLSMDKSLGMYM-TGSDIITGNAMINMDCYRWVERDSYLPFGSRTLKQVCKIKLK 459

Query: 405  YDPLEVNPEDMVRFAKEKPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVL 464
            Y+P E++PE+MV  A+  PQ +A YSVSDAVATYYLYM Y+H FIF+L  I+P+ P++VL
Sbjct: 460  YNPTELDPEEMVPCARNDPQTLAVYSVSDAVATYYLYMKYIHSFIFALCYIVPLQPNDVL 519

Query: 465  RKGSGTLCEMLLMVQAYKANVICPNKHQSDPEKFYRN------HLLESETYIGGHVECLE 518
            R+GSGTLCE LLM +AY   V+ PNKH+    +++++      HL+   +YIG  V  L 
Sbjct: 520  RQGSGTLCESLLMAEAYSNQVLFPNKHKQSGIRYFKDPVTSKHHLIYDNSYIGARVASLR 579

Query: 519  SGVFRSDLPTSFKLDPSAYEQLLNNLDRDLQYAIKVEG------------KMDLESVS-- 564
             G+FR DL   F+L  SAY++L+++LD+ L       G              D  S++  
Sbjct: 580  CGLFRDDLKERFELKSSAYQELIDDLDQCLNAWADGNGVDKGTGEPPDTTSADFTSLAPE 639

Query: 565  ----------NYDEVKNAIMEKLLRLQEEPIREECPLIYHLDVAAMYPNIILTNRLQPPS 614
                      N+DEV   I E+L++L+++P+    P IYHLDV AMYPNII++ RLQP +
Sbjct: 640  WLRRRFSNFENFDEVYTTIRERLVKLRDQPVINTFPRIYHLDVGAMYPNIIISQRLQPTA 699

Query: 615  IVTDEVCTACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYYHLKKQIESEFVDGTNGHLS- 673
            +VT+E C  C +      C ++++W  + EI    R+    L K +ES    GT  + + 
Sbjct: 700  VVTEEFCQKCSYYSESNVCQKRMQWKQKLEISPVDRNHILPLMKDLESRTYRGTVQYSTR 759

Query: 674  --------------------------KSFLDLPKMEQQSRLKDRLKKYCQKAYKRVLDKP 707
                                      +++  L + EQ S L+  +K Y QK + ++  K 
Sbjct: 760  DQTNRDSDASSDESDSLEPEYPRVKMRTWKQLTEREQASELQKVIKSYSQKVFNKM--KV 817

Query: 708  VTELR-EAGICMRENSFYVDTVRSFRDRRYEYKGLNKVWKGKLSE--AKASGNSIKIQEA 764
              EL  E+ +C REN FY+ TV+ FRD+RY YK L K  +  L E      G+S++I+E 
Sbjct: 818  TRELDVESIVCQRENPFYLFTVQKFRDKRYVYKRLKKEAENGLKELLKNPVGHSVEIKEM 877

Query: 765  QDMVVLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIG 824
            +D +++ DSLQLAHKCILNSFYGYV R G+RWYSMEM  +VTY GA+II  A  LI  +G
Sbjct: 878  RDRILVSDSLQLAHKCILNSFYGYVKRGGSRWYSMEMGAIVTYAGAEIIDAAHKLIRDVG 937

Query: 825  KPLELDTDGIWCVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVD 884
             P+ELDTDGIWC+LP  FP     K K   K L + Y   +LN  + R  TNDQY  + D
Sbjct: 938  IPIELDTDGIWCMLPDIFPAVVDLKCKGSNKTLELEYMTTVLNRLIERQWTNDQYLEMED 997

Query: 885  PVSKTYETHSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKR 944
             + K Y       I FE+DGP+ AM LPAS++   L+KKRY VFN +  + ELKGFEIKR
Sbjct: 998  -IGK-YRRVRRNEILFELDGPWHAMFLPASEKSEDLLKKRYVVFNHNKQIVELKGFEIKR 1055

Query: 945  RGELKLIKVFQAELFDKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISE 1004
            RGE+++I++ Q E+F K+L G T E+ Y   A++   +   LD    ++ D ++ D +  
Sbjct: 1056 RGEMRMIQLLQEEIFPKYLLGVTKEDAYRHAASIGLGYRTSLDMHATNMDDDDMFDLLVA 1115

Query: 1005 SSTMSKSLADYGEQKSCAVTTARRLSD-FLGDTMVKDKGLRCQYIVACEPQGTPVSERAV 1063
              T+ + ++     K   +TTA+RL++ F  D+ + D  L   +++   P   P + RA+
Sbjct: 1116 RKTVKQPVSKQPNSKCFGITTAKRLAELFKDDSYINDGNLCMSFLLVSHPSEAPRTARAI 1175

Query: 1064 PVAIFETDAEIMKFYLRKWCK----TSSDVGIRSIVDWSYYKQRLSSAIQKIITIPAAMQ 1119
            P+  F  +  +    L +W K    T+ + G+R I+DW YY+++L + + K++ IPA +Q
Sbjct: 1176 PIQSFMVEPGLRAQCLARWLKIQLSTALNSGVRDILDWDYYREKLDTQMLKLVCIPAVLQ 1235

Query: 1120 KVSNPVPRVVHPDWLYKKVREKEDKFRQRKLVDIFS 1155
             + NP+P +  P WL KK +E  D  RQ+ +   F+
Sbjct: 1236 GLDNPLPMIQLPPWL-KKRKEATDT-RQKDITSFFT 1269



 Score = 46.6 bits (109), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 27/105 (25%), Positives = 44/105 (41%), Gaps = 9/105 (8%)

Query: 1852 AEFRDPCPSFILPNVICSYCNDCRDLDLCR-------DMALLAQDWHCAMPQCGQPYDRE 1904
             E+  P     L +V C +C+   +L++         +   +   W C +  C    D  
Sbjct: 2205 GEWYPPIQRLELSSVCCRHCSMVFNLEVVSTFISDELESGEVDHYWRCEL--CSSRLDNR 2262

Query: 1905 VMENALLQIVRQRERLYHLQDLVCIRCNQVKAAHLAEQCACAGSF 1949
             +E +L++ +      Y  QDLVC  C  +K  HL+  C C G F
Sbjct: 2263 DVEVSLIRFLENLFCAYQSQDLVCRDCKSIKQLHLSRMCTCGGQF 2307


>gi|393911471|gb|EJD76321.1| DNA polymerase [Loa loa]
          Length = 2288

 Score =  754 bits (1946), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 422/967 (43%), Positives = 581/967 (60%), Gaps = 57/967 (5%)

Query: 461  DEVLRKGSGTLCEMLLMVQAYKANVICPNKHQSDPEKFYRN-HLLESETYIGGHVECLES 519
            DEVLRKGSGTLCE LLMV+A+  N+I PNK      K+  + H++ESETY+GG+VE LES
Sbjct: 607  DEVLRKGSGTLCEALLMVKAFHNNIIFPNKSLPYGAKYASDGHVIESETYVGGYVEALES 666

Query: 520  GVFRSDLPTSFKLDPSAYEQLLNNLDRDLQYAIKVEGKMDLESVSNYDEVKNAIMEKLLR 579
            GVFR+D+P  F++ P+A   L  N+ + L  ++  E  ++++ V N+D V + I  +L  
Sbjct: 667  GVFRADIPEKFRIVPAAILDLKRNVRKTLSDSLTHEFGVNMDEVVNFDSVVSKIETQLDD 726

Query: 580  LQEEPIREECPLIYHLDVAAMYPNIILTNRLQPPSIVTDEVCTACDFNRPGKTCLRKLEW 639
              + P+R E P IYHLDV AMYPNIILTNRLQP ++VT+E C AC +N P   C R + W
Sbjct: 727  FIKRPLRLETPKIYHLDVGAMYPNIILTNRLQPSAVVTNEDCIACVYNSPDAKCRRTMRW 786

Query: 640  VWRGEIFMGKRSDYYHLKKQIESEFVDGTNGHLSKSFLDLPKMEQQSRLKDRLKKYCQKA 699
             WRGEI    R +Y  + +Q+E+E    T G   ++F  L   ++      R+K +C++A
Sbjct: 787  EWRGEIMPASRGEYERILQQLENE----TFGKPPRAFHSLDHDQRIQIEIKRVKDFCKRA 842

Query: 700  YKRVLDKPVTELREAGICMRENSFYVDTVRSFRDRRYEYKGLNKVWKGKLSEAKASGNSI 759
            Y +       E R   IC REN+FYVDTV++FRDRRYEYK + K  K  L E   S + I
Sbjct: 843  YGKT-HITKNEYRYTTICQRENAFYVDTVKAFRDRRYEYKAMLKKAKAVLDEV--SDDDI 899

Query: 760  -KIQEAQDMVVLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARL 818
              ++ AQ  VVLY+SLQLAHKCILNSFYGYVMRKGARW+SMEMAG+V +TGA II  AR 
Sbjct: 900  HALKTAQGRVVLYESLQLAHKCILNSFYGYVMRKGARWFSMEMAGIVCHTGANIITEARK 959

Query: 819  LIEKIGKPLELDTDGIWCVLPGSFPENFTFKTKDLKKK-LTISYPCVMLNVDVARNNTND 877
            L+E+IGKPLELDTDGIWC++PG+FPEN TF   + K+K +TISYP  +LN  +    TN+
Sbjct: 960  LVERIGKPLELDTDGIWCLIPGTFPENITFTLNNSKRKTVTISYPGAILNALIHDKFTNN 1019

Query: 878  QYQTLVDPVSKTYETHSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAEL 937
            Q+  L   +  TY   SE SI FEVDGPY AMILPAS+EEG  +KKRYAVFN DG+LAEL
Sbjct: 1020 QFHQL--ELDGTYSITSENSIFFEVDGPYLAMILPASREEGKRLKKRYAVFNFDGSLAEL 1077

Query: 938  KGFEIKRRGELKLIKVFQAELFDKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSE 997
            KGFE+KRRGEL LIK FQ+ +F  FL G    E Y   A  AN WLD+L ++G  I D E
Sbjct: 1078 KGFEVKRRGELALIKYFQSSVFKAFLKGKNHPEAYEHAAKEANYWLDVLFSKGATIPDYE 1137

Query: 998  LIDYISESSTMSKSLADYGEQKSCAVTTARRLSDFLGDTMVKDKGLRCQYIVACEPQGTP 1057
            L D I+E+ +MSK L DYGEQKS +++TA+RL++FLGD MVKD GL C++I++  P   P
Sbjct: 1138 LFDLIAENRSMSKKLDDYGEQKSTSISTAKRLAEFLGDDMVKDVGLACRFIISKMPLDAP 1197

Query: 1058 VSERAVPVAIFETDAEIMKFYLRKWCK----TSSDVGIRSIVDWSYYKQRLSSAIQKIIT 1113
            V++RA+P+AIF+    +   YLRKW K    T  ++ IR+I+DW YY +R  + IQKII+
Sbjct: 1198 VAQRAIPLAIFQAAPNVSAHYLRKWTKDTTITKDNINIRNIIDWEYYIERFGATIQKIIS 1257

Query: 1114 IPAAMQKVSNPVPRVVHPDWLYKKVREKEDKFRQRKLVDIFSSLKKDDFLNKTCNAETNL 1173
            IPAA+Q V NPVPRV  PDWL  K +++++  +Q K+ +IF       F     N  ++ 
Sbjct: 1258 IPAALQNVPNPVPRVPFPDWLENKRQQRKNDHKQPKINEIFKKATTLAFTPDIENINSSR 1317

Query: 1174 MD-----ENVEDLEDFPKKRRNSVNGPRPIVRCFEVNNEQKT--VKTTDQVDSLRQQLEP 1226
                    NV  L + P   ++S      +         Q +   K TD+ +   + L  
Sbjct: 1318 AASNSSLNNVTLLSNSPNSEKDSSTTTTCVFLNVAAKQSQSSSLTKITDRWERFLRILMM 1377

Query: 1227 SEVSDQQPSSQNAIDTENIDRIVDYKGWLELKKRKWKDNLDRRKKQKLGSLRASHQANGV 1286
              V D        I  ++    V  + +L+ K +K +   +RRK+  L        + G+
Sbjct: 1378 KTVKD-------VIGFQS-SNFVTKRTYLKAKWQKERAEKNRRKQNAL--------SKGI 1421

Query: 1287 SESLGDMINHKEAQRRTGVGSYFRRQETAMTRCHWQIIQLVPSSQSGVFLAWVVVEGIMV 1346
                            T + S   R +  M    WQI+++  +   G+   W ++   M+
Sbjct: 1422 ----------------TPIMSMLERGKQMMRDTAWQIVKISETPSKGMLALWCIILDKMM 1465

Query: 1347 RIPITVPRLFYLNSKDPIVEKFPGRRVNKTLPHGRRSFNLIEVMIDEDQFRKESKKLAAL 1406
            +I + +PR+ Y+N+++       G  V + LP  +  FNL + +IDE  F     +L   
Sbjct: 1466 KINLRMPRIIYVNNREE--NGNSGILVKRILPRLKPVFNLRQYVIDERIFESSLNQLNKE 1523

Query: 1407 LADPEVE 1413
            L    +E
Sbjct: 1524 LCAMRIE 1530



 Score =  544 bits (1401), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 275/571 (48%), Positives = 385/571 (67%), Gaps = 22/571 (3%)

Query: 5   RWDRQDGRRTKKQKLIRSAEEELEAKLGYDLFSEGDKRLGWLLTFASSSLEDEDTRKVYS 64
           + D   G R +K   IRS+E  L+ K G+  +++ + +  WLL   S+ + DE T+ + +
Sbjct: 49  KLDSSYGSRLQK---IRSSEI-LDQKFGFQRYTDIEWKNAWLLNVQSAEMIDEQTKNIIA 104

Query: 65  CIDLYFVSQDGSTFKSKYKFRPYFYAATKEKMEMDVEAYLRRRYESQIADIEILEKEDLD 124
             D YF+ +DG  FK  Y FRPY Y AT    E  V +YL ++Y S I   +I+EKEDLD
Sbjct: 105 VCDFYFLEEDGGRFKISYPFRPYLYIATLPSFEHQVLSYLSKKYTSVIT-TDIVEKEDLD 163

Query: 125 LKNHLSGLHKSYLKISFDTVQQLMDVKKDLLHVVERNQAKFDAAEAYESILT---GKREQ 181
           LKNHL+GL ++YLKISF ++ +L+  KKD++ ++ RNQ +     +Y ++LT   G RE 
Sbjct: 164 LKNHLAGLKRTYLKISFPSLSELLKFKKDIMPILRRNQEREKQTTSYTNLLTRHFGPREV 223

Query: 182 RPQD--FLDCIVDLREYDVPYHIRFAIDNDVRCGQWYDVSISSTG------PLLEKRVDL 233
              +   L+ I+DLRE+D+PY +R  ID +V  G WY V    TG      P + +   L
Sbjct: 224 LFDEGGVLEKIIDLREHDLPYQMRVCIDMEVFVGLWYRV----TGRDFDRRPKITRHPTL 279

Query: 234 LQRAEVHVCAFDIETTKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYT 293
           +   E  + A+DIE TKLPLKFPD+ +D IMMISYM++G G+LIINR+ +  D++D EYT
Sbjct: 280 IDPPEPIILAYDIEVTKLPLKFPDSTFDEIMMISYMVNGNGFLIINRQIISTDVDDFEYT 339

Query: 294 PKPEFEGYFKVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKM 353
           PKPE++G F+V N+ +E  +++ +F H+  ++P ++VTYNGD FDWPF+E RAA HG  M
Sbjct: 340 PKPEYKGIFRVINLPDEKAVIKYFFDHIIRLRPSVFVTYNGDSFDWPFVEARAAVHGLNM 399

Query: 354 SEELGFQCDKNQGECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPE 413
             E+G     + GE R   A HLD F WVKRDSYLP GSQ LK+ TKAKL YDP+E++PE
Sbjct: 400 LTEIGVS-KNSSGEYRTTNAVHLDAFRWVKRDSYLPVGSQNLKSCTKAKLRYDPVELDPE 458

Query: 414 DMVRFAKEKPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCE 473
           +M   AK++PQ +A+YSVSDAVATYYLY+ YVHPFIF+L TIIP+ PD+VLRKGSGTLCE
Sbjct: 459 EMCAMAKDEPQTLANYSVSDAVATYYLYIKYVHPFIFALCTIIPLGPDDVLRKGSGTLCE 518

Query: 474 MLLMVQAYKANVICPNKHQSDPEKFYRN-HLLESETYIGGHVECLESGVFRSDLPTSFKL 532
            LLMV+A+  N+I PNK      K+  + H++ESETY+GG+VE LESGVFR+D+P  F++
Sbjct: 519 ALLMVKAFHNNIIFPNKSLPYGAKYASDGHVIESETYVGGYVEALESGVFRADIPEKFRI 578

Query: 533 DPSAYEQLLNNLDRDLQYAIKVEGKMDLESV 563
            P+A   L  N+ + L  ++  E  ++++ V
Sbjct: 579 VPAAILDLKRNVRKTLSDSLTHEFGVNMDEV 609



 Score =  107 bits (266), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 74/253 (29%), Positives = 131/253 (51%), Gaps = 18/253 (7%)

Query: 1441 SLARYAHILWISDDGVPDLGGTSEEDECFADEVHQP---------VLTYPGAYRKVSVEL 1491
            SL    ++LW S    PDLGG  E D+   + V            V+        V +EL
Sbjct: 1777 SLINQGYVLWASPLSRPDLGG-KELDDTRLNAVWSSLSINKQSVCVVNESSFETDVCIEL 1835

Query: 1492 KIHHLSVNALLKSNQVNEMEGGG-LFGF------DQDMNSGPYNNELCGFDETTSSAPAF 1544
            ++  + V A+++S  + + EGG    GF        D   G Y   +  +DE  + A   
Sbjct: 1836 ELGAVDVTAIVQSASIADAEGGADSVGFLTGSVLSADALLG-YVRSIAQYDEGAAVAGPL 1894

Query: 1545 RVVKQLIQRCLTDAVTSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAML 1604
            +V++ L+  C+ D    G+  AD ++  L RWL + HS ++DP + R++  ++ K+  +L
Sbjct: 1895 KVLRLLLHDCIKDIHLYGSKIADQVIISLDRWLRTQHSLMYDPAIVRVVDILITKLILLL 1954

Query: 1605 LAEFRKLGATIIFANFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWH 1664
            +AE  +LG  +I+A+ S++I+ T +  L  A+++ +SLL +L+   +F  + ++ V FW 
Sbjct: 1955 VAELNRLGGRVIYASSSQLIMCTQRSTLEHAQSFVNSLLLSLENHAIFASLNVKAVKFWD 2014

Query: 1665 SLLFMDQYNYGGI 1677
             LL++D  +Y GI
Sbjct: 2015 ILLWVDANDYIGI 2027



 Score = 73.9 bits (180), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 53/211 (25%), Positives = 91/211 (43%), Gaps = 9/211 (4%)

Query: 1775 LSIVRDAIHHMKKMNNDQHNSPGVMQTAANIHKVDAPLEFIKHVCAAFALDQNVQHDVLV 1834
            L++VR+ +   ++M +  +N    +    N    D+ +  +K +     LD  V   V  
Sbjct: 2086 LNLVRNEV--TEQMFDFLNNLSSSVDIRENTDLRDSIILIVKGISHFIGLDCTVYESVAK 2143

Query: 1835 MRKNLLKYVRVREFAPEAEFRDPCPSFILPNVICSYCNDCRDLDLCRDMALLAQDWHCAM 1894
            +R  LL+ + V + + +  ++    S  L  + CS C    DLD+C+  A     W C  
Sbjct: 2144 LRYQLLRMLDVDDSSHDDTWQSLNVSCTLTQLFCSVCCQSNDLDVCQSEA-----WIC-- 2196

Query: 1895 PQCGQPYDREVMENALLQIVRQRERLYHLQDLVCIRCNQVKAAHLAEQCACAGSFRCKED 1954
            P CG+ +    +E  L++ V Q    Y +QD  C RC  V+  +L+  C C G       
Sbjct: 2197 PSCGKQFHSSTIEQLLIERVNQLLIAYTIQDFKCTRCEAVRRHNLSLFCDCCGVEENVIS 2256

Query: 1955 ASDFRSKMQIFLNIANRQGFQLLQECTSWIL 1985
             ++ R  ++    IA +     L E   W L
Sbjct: 2257 PAELRFNLETVGKIAQQHNLTRLAELCGWTL 2287


>gi|237841111|ref|XP_002369853.1| DNA polymerase epsilon catalytic subunit, putative [Toxoplasma gondii
            ME49]
 gi|211967517|gb|EEB02713.1| DNA polymerase epsilon catalytic subunit, putative [Toxoplasma gondii
            ME49]
          Length = 3124

 Score =  753 bits (1943), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 534/1655 (32%), Positives = 804/1655 (48%), Gaps = 300/1655 (18%)

Query: 27   LEAKLGYDLFSEGDKRLGWLLTFASSSLE---DEDTRKVYSCIDLYFVSQDGSTFKSKYK 83
            LE +L   ++S    + G+L        E    ED ++  S + LYFVS+ G+++++   
Sbjct: 204  LERELRVSVWSGVGTKRGYLYNMVQMQAEVATSEDKKETVSGLHLYFVSETGASWRTSLL 263

Query: 84   FRPYFYAATKEKMEMDVEAYLRRRYESQIADIEI-LEK---EDLDLKNHLSGLH------ 133
            +RPYFY + +       E  L+      + D ++  EK   EDL    HL  L       
Sbjct: 264  YRPYFYISLRRTRASYFEQ-LKEALMDLLGDADVRFEKTFREDLSDPLHLRTLLPGGPAP 322

Query: 134  --------KSYLKISFDTVQQLMDVKKDLLHVV--------------------ERNQAKF 165
                    + +++ISF  V+QL+D + +L  +V                    E+ +AK 
Sbjct: 323  DEGTNSSLREFVQISFANVKQLVDARDELRKIVRRNQERRARQREEERLASFAEKTKAKD 382

Query: 166  DAAEAY---------------------------------------ESILTGKREQRPQDF 186
             A  +Y                                       E   + +++Q+ +D 
Sbjct: 383  GAFASYSHARFAAPDDINFADIAFSNSCQADEGRDGRDMPRGGRQEDSKSRRKKQQGEDV 442

Query: 187  LDCIVDLREYDVPYHIRFAIDNDVRCGQWYDVSISSTG---PL-LEKRVDLLQRAEVHVC 242
               I D+ E DV Y  R  ID  +RCG W+DV  SS+    P+ L    +      + V 
Sbjct: 443  TALIEDIFEADVLYITRCCIDLKLRCGLWHDVQRSSSALASPVALTPLPNCATAPPLRVL 502

Query: 243  AFDIETTKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGY- 301
            A+DIE +K PLKFPD++ D +++ISYM +GQGYLI+NR+ + EDI   E+  K   EG  
Sbjct: 503  AWDIECSKQPLKFPDSNTDNVILISYMFNGQGYLIVNRQWLSEDIHPFEFRAKKGMEGAG 562

Query: 302  -FKVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQ 360
             F + N   E ELL  +  H+ +++P I  TYNGD FD+PF+  R   +G       G  
Sbjct: 563  PFIIFNEKGEKELLSRFVQHVLKLRPHILATYNGDTFDFPFVYKRGELNGLDFISSFGIT 622

Query: 361  CDKNQGECRAKFA-CHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFA 419
               +    +   A  H+DCF WV+RDSYLPQGS+ LK V K KL ++P+EV+PEDMV  A
Sbjct: 623  PFTSDNSFQGNSALIHIDCFKWVERDSYLPQGSRTLKLVCKEKLRFNPVEVDPEDMVPLA 682

Query: 420  KEKPQMMASYSVSDAVATYYLYMTYVH--------------------------------- 446
              +PQ +A YSVSDAVAT++LY  Y+H                                 
Sbjct: 683  LNRPQELAVYSVSDAVATFFLYEKYIHNFILALCTIIPMTVRRSRMRVRLIRSAALRCCR 742

Query: 447  ------PFIF------------SLAT-------------IIPMS----PDEVLRKGSGTL 471
                  PF+F            SLAT               P++    P+ VLR+GSGTL
Sbjct: 743  FSLRRAPFVFLDGYSIGLRLWPSLATPRCSDGEPSLSLRCSPIARVPQPEYVLRQGSGTL 802

Query: 472  CEMLLMVQAYKANVICPNKHQSDPEKFYRN------HLLESETYIGGHVECLESGVFRSD 525
            CE LLM +A   NV+ PNKHQ    +++R+      HL+  ++Y+GG VE L+ G+FR+D
Sbjct: 803  CEQLLMAEAAGRNVLFPNKHQHRYLQYWRDEKSKKMHLVLEDSYVGGRVESLKCGIFRND 862

Query: 526  LPTSFKLDPSAYEQLLNNLDRDLQYAIKVE-----GKMDLESVSNYDEVKNAIMEKLLRL 580
            L  +F LD  AY+ L++ LD  L + +  E       +  E   ++   +  I+E+L  L
Sbjct: 863  LEETFTLDSDAYQFLIDTLDETLLFWLDQENGSSSSPLTPEDFPDWQVHREDILERLTSL 922

Query: 581  QEEPIREECPLIYHLDVAAMYPNIILTNRLQPPSIVTDEVCTACDFNRPGKTCLRKLEWV 640
            ++  +    P+IYHLDV+AMYPNIILT+RLQPP++V +E C+ C F++    C R++ W 
Sbjct: 923  RDSRVLRCLPVIYHLDVSAMYPNIILTHRLQPPAMVDEEYCSQCPFSKEAPQCQRRMTWR 982

Query: 641  WRGEIFMGKRSDYYHLKKQIESEFVD---------------------------------- 666
             + E+   ++     L+++++ +  D                                  
Sbjct: 983  RKLEVSPAEKGHILPLQQKLQMKLFDVASSDRREKQQSPKEEAREDEDTESEEEWDEEGA 1042

Query: 667  ----GTNGHLS-----------KSFLDLPKMEQQSRLKDRLKKYCQKAYKRV-LDKPVTE 710
                G  G              K++ +L + ++   L   +K +  KAYK+  + K V +
Sbjct: 1043 KKKRGRGGFARSEETEAARASRKTWTELTEKQKHMELIKVVKDFSLKAYKKTKVQKEVDQ 1102

Query: 711  LREAGICMRENSFYVDTVRSFRDRRYEYKGLNKVWKGKLSEAKASGNSIK-IQEAQDMVV 769
              EA +C REN FYVDTVR+FRDRRY +K   K  +    + +  G S +  ++A D+++
Sbjct: 1103 --EAIVCQRENPFYVDTVRAFRDRRYIFKRRLKAAERLREKLEKEGGSFQEKKDADDVIL 1160

Query: 770  LYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLEL 829
            L DSLQLAHKCILNSFYGYV R  ARWYSM+M  VVT  GA IIQ A+ +I+ +G  +EL
Sbjct: 1161 LNDSLQLAHKCILNSFYGYVKRDAARWYSMQMGAVVTKAGADIIQGAKNMIDGLGVTMEL 1220

Query: 830  DTDGIWCVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKT 889
            DTDGIWC+LP  FP+ + F  K   K+    +P  +LN DV R  TNDQY    D  S+T
Sbjct: 1221 DTDGIWCMLPQKFPQKYMFLDK-TGKEFRFEFPTTILNQDVHRRYTNDQYLDF-DEDSRT 1278

Query: 890  YETHSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELK 949
            ++  +   + FE+DGP++AM LPAS++   L+KKRY +F  DGT++ELKGFE+KRRGEL+
Sbjct: 1279 FKRQTRNEVYFELDGPWRAMFLPASEKSDDLLKKRYVIFALDGTISELKGFEVKRRGELQ 1338

Query: 950  LIKVFQAELFDKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSE-LIDYISESSTM 1008
            +IK+FQ E+F K + G T EE Y A AAVA R+ DLL +QG  + D E L + I     +
Sbjct: 1339 IIKLFQTEVFPKLIEGKTKEEAYGAAAAVAYRYRDLLTSQGVSVQDDEDLEELIVTKKVL 1398

Query: 1009 SKSLADYGEQKSCAVTTARRLSDFL-GDTMVKDKGLRCQYIVACEPQGTPVSERAVPVAI 1067
             K +   G  KS ++TT +RL++ L  +T + D  +  QYIV   P G   + RAVPV +
Sbjct: 1399 GKPVVSQGLGKSMSITTGKRLAELLRNETYLTDAPVSTQYIVVNRPVGVEKTARAVPVQL 1458

Query: 1068 FETDAEIMKFYLRKWCKTS---------------------------SDVGIRSIVDWSYY 1100
            F +  E   FY  KW   S                           + + IR ++DWSYY
Sbjct: 1459 FHSSPETKAFYYHKWLGISPSSVASFSSSSGEITGDASGSASTHALASIDIRQLIDWSYY 1518

Query: 1101 KQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLYKKVREKEDKFRQRKLVDIF------ 1154
             +RL    QKI+ IPA  Q + NP+P V  P+WL K+  +  +   Q K+   F      
Sbjct: 1519 SERLDVQFQKILCIPAMRQGLPNPIPEVAVPEWLKKQ--QATNNPLQSKMEHFFKWKKHA 1576

Query: 1155 ----SSLKKDDFLNKTCNAETNLMDENVEDLEDFPKKRRNSVNGPRPIVRCFEVNNEQKT 1210
                +  +K+D   +  + +     E   D+E+ P+   N + G R   R  ++  EQK 
Sbjct: 1577 APATTETQKEDRQERAESGDLFADGEAAVDVENIPEV--NCMQGSRLETRASQLPEEQKG 1634

Query: 1211 VKTTDQVDSLRQQLEPSEVSDQQPSSQNAIDTENIDRIVDYKGWLELKKRKWKDNLDRRK 1270
            ++   +    + + +  E    +                D   W+  +K+KWK   +R +
Sbjct: 1635 LQARREERERQMEQKQEEKRMWKH---------------DIVAWVAAQKQKWKQQRERLR 1679

Query: 1271 KQKLGSLRASHQ-ANGVSESLGDMINHKEAQRRTGVGSYFRRQETAMTRCHWQIIQ-LVP 1328
            + +  +L A  +   G++ ++    N   A+     G         +T+  W ++   V 
Sbjct: 1680 QSRARALSAVQRLPAGLTPAILTR-NPGAAKLMKHWGLSLHDVALLLTQ-PWHLLDFFVD 1737

Query: 1329 SSQSGVFLAWVVVEGI--MVRIPITVPRLFYLNSKDPIVEKFPGRRVNK----------- 1375
            S   G+F   V  +       +P+ V R  +LN+K  I E    R +             
Sbjct: 1738 SRDPGLFFCRVATDASRGFYTVPVQVYRQVFLNTKREIGELLQDRNILSPDADISLKPLR 1797

Query: 1376 ---TLPHGRRSFNLIEVMIDEDQFRKESKKLAALL 1407
                LP G R   L+E+ + E  F++E  KL +L 
Sbjct: 1798 GVYALPRGVRQHELVEMSMPESLFQREKNKLPSLF 1832



 Score = 60.1 bits (144), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 40/168 (23%), Positives = 85/168 (50%), Gaps = 10/168 (5%)

Query: 1519 DQDMNSGPYNNELCGFDETTSSAPA-FRVVKQLIQRCLTD-AVTSGNVFADAILQHL--- 1573
            ++D ++   +  L  F  TT   PA FR + + +++   D +   G V   ++++HL   
Sbjct: 2474 EKDYDADGPDESLADFHSTTQFHPAAFRTLGRSLEKLYRDLSSLRGRVTYPSVVRHLVAL 2533

Query: 1574 ----YRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEF-RKLGATIIFANFSKVIIDTG 1628
                Y W+CSP S L DP LH+ + +     F++ L+E   +   +++FAN  ++++ T 
Sbjct: 2534 PNFFYSWVCSPESLLFDPALHQKVLRYCTVYFSLFLSELSERRNLSVVFANPRRLLVATP 2593

Query: 1629 KFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLFMDQYNYGG 1676
               LS  + +  S++  L +  LF+ + +     + +++ +D  ++ G
Sbjct: 2594 HVLLSEGEKHLKSIICHLHSNTLFDALPVTVSSAFVAVVQLDASSWIG 2641



 Score = 52.0 bits (123), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 34/134 (25%), Positives = 53/134 (39%), Gaps = 9/134 (6%)

Query: 1854 FRDPCPSFILPNVICSYCNDCRDLDL---------CRDMALLAQDWHCAMPQCGQPYDRE 1904
            +R P  S  L +V C  C    D+DL           +   L     C  P+CG+ +   
Sbjct: 2972 WRSPLKSLSLRDVECGACRTVDDVDLLLCIREEQEALENGELVDFKTCNCPRCGEAFPDA 3031

Query: 1905 VMENALLQIVRQRERLYHLQDLVCIRCNQVKAAHLAEQCACAGSFRCKEDASDFRSKMQI 1964
            ++E  L + V ++   Y  QD  C  CN V A +   +C C    R +    D+   ++ 
Sbjct: 3032 LIEAHLYRAVGEKYYAYAAQDHPCSSCNAVNALYRRSKCRCGKPLRARLKEEDWEEFIES 3091

Query: 1965 FLNIANRQGFQLLQ 1978
                A   G+  LQ
Sbjct: 3092 VQEFAVEMGYDKLQ 3105


>gi|154278273|ref|XP_001539952.1| hypothetical protein HCAG_05419 [Ajellomyces capsulatus NAm1]
 gi|150413537|gb|EDN08920.1| hypothetical protein HCAG_05419 [Ajellomyces capsulatus NAm1]
          Length = 774

 Score =  751 bits (1938), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 365/680 (53%), Positives = 483/680 (71%), Gaps = 19/680 (2%)

Query: 117 ILEKEDLDLKNHLSGLHKSYLKISFDTVQQLMDVKKDLLHVVERNQAKFDAAEAYESILT 176
           I+EKEDL + NHL G  + +L++SF  V  L+ V+K +L + ++N+   +A + Y  + +
Sbjct: 97  IVEKEDLQMPNHLLGHKRRFLQLSFANVGDLLGVRKSILPIAQKNKKNVNAMDTYAEMAS 156

Query: 177 G---------KREQRPQD-FLDC---IVDLREYDVPYHIRFAIDNDVRCGQWYDVSISST 223
                     +   RPQ  F+D    IVD+REYDVPYH+R +ID D+R G+WY V   + 
Sbjct: 157 SNVGFDLFDEEVNDRPQKAFIDASEYIVDIREYDVPYHVRVSIDKDIRIGKWYSVQSKNG 216

Query: 224 GPLLEKRVDLLQRAEVHVCAFDIETTKLPLKFPDADYDIIMMISYMLDGQGYLIINRECV 283
              L    D L+RA+  V A+DIETTKLPLKFPD   D IMMISYM+DGQG+LI NRE V
Sbjct: 217 VISLSCIEDRLKRADPVVLAYDIETTKLPLKFPDPVIDQIMMISYMIDGQGFLITNREIV 276

Query: 284 GEDIEDLEYTPKPEFEGYFKVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLE 343
            EDI D EYTPKPE++G F + N  +E  ++  +FAH++E KP +  TYNGD+FDW F+E
Sbjct: 277 SEDIADFEYTPKPEYDGPFTIFNEPDEKRVIERFFAHIKEAKPTVIATYNGDFFDWAFVE 336

Query: 344 TRAAHHGFKMSEELGFQCDKNQGEC-RAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAK 402
            RA+  G  M  E+GF+  KN  +  ++ +  H+DCFAWV RDSYLPQGS+GLKAVT AK
Sbjct: 337 ARASVQGIDMYAEIGFR--KNSEDIYQSNYCVHMDCFAWVNRDSYLPQGSRGLKAVTVAK 394

Query: 403 LGYDPLEVNPEDMVRFAKEKPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDE 462
           LGYDP E++PE M R+A E+PQ +A YSVSDAVATYYLYM Y+HPFIFSL TIIP++PD+
Sbjct: 395 LGYDPDELDPEVMTRYASERPQTLAEYSVSDAVATYYLYMKYIHPFIFSLCTIIPLNPDD 454

Query: 463 VLRKGSGTLCEMLLMVQAYKANVICPNKHQSDPEKFYRNHLLESETYIGGHVECLESGVF 522
           VLRKG+GTLCEMLLMVQAY+ N+I PNKH   PE F+  HLL+S+TY+GGHVE +E+GVF
Sbjct: 455 VLRKGTGTLCEMLLMVQAYRGNIILPNKHTEPPEAFWNGHLLDSQTYVGGHVESIEAGVF 514

Query: 523 RSDLPTSFKLDPSAYEQLLNNLDRDLQYAIKVEGKMDLESVSNYDEVKNAIMEKLLRLQE 582
           RSD+P +F +DP+A ++LL++LD  L+++I VE K  L+ V NYD+VK  I +KLL L+E
Sbjct: 515 RSDIPVNFTVDPAAIDELLHDLDAALKFSIVVEEKKALDDVINYDKVKAQIAKKLLNLKE 574

Query: 583 EPIREECPLIYHLDVAAMYPNIILTNRLQPPSIVTDEVCTACDFNRPGKTCLRKLEWVWR 642
            P R E P IYHLDVA+MYPNI+ TNRLQP S++ +  C  CDFNRPGKTC R++ W WR
Sbjct: 575 TPNRNEKPSIYHLDVASMYPNIMTTNRLQPDSMIQESDCAVCDFNRPGKTCDRRMPWSWR 634

Query: 643 GEIFMGKRSDYYHLKKQIESE-FVDGTNGHLSKSFLDLPKMEQQSRLKDRLKKYCQKAYK 701
           GE    KR +Y  +++ + +E F   T     ++F +L   EQ + +K RL+ Y +K Y 
Sbjct: 635 GEYIPAKRDEYNMIRRAVANEKFPGKTKKSPMRAFEELSTSEQATIVKKRLQDYSKKIYH 694

Query: 702 RVLDKPVTELREAGICMRENSFYVDTVRSFRDRRYEYKGLNKVWKGKLSEAKASGN-SIK 760
           R+ +    + REA IC REN FYVDTVRSFRDRRY++KG  KVWK K    KA+G  +++
Sbjct: 695 RIYESKTVQ-REAIICQRENPFYVDTVRSFRDRRYDFKGQQKVWKVKTDSLKAAGAPAVE 753

Query: 761 IQEAQDMVVLYDSLQLAHKC 780
           I+EA+ M++L+DSLQLAHK 
Sbjct: 754 IEEAKKMIILFDSLQLAHKS 773


>gi|403223604|dbj|BAM41734.1| DNA polymerase epsilon catalytic subunit [Theileria orientalis strain
            Shintoku]
          Length = 2283

 Score =  740 bits (1911), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 440/1200 (36%), Positives = 664/1200 (55%), Gaps = 116/1200 (9%)

Query: 64   SCIDLYFVSQDGSTFKSKYKFRPYFYAATKEKMEMDVE-AYLRRRYESQIADIEILE--- 119
            S + LYF+S+DG+ + +     PYFY +  ++  +DV   +L  +++       +LE   
Sbjct: 69   SALSLYFISEDGTEWNTSVIHSPYFYVSVLKEDYIDVVLQFLYNKFQVNAIGPVLLEPCK 128

Query: 120  KEDLDLKNHLS------GLHK----SYLKISFDTVQQLMDVKKDLLHVVERNQAK----- 164
            K DL L NHL       G+ K    + +KISF T+ QL +  +D++  ++R   K     
Sbjct: 129  KIDLSLPNHLEKVDAVEGVSKHNLATLIKISFKTIDQL-ERGRDMIAAMKRQYEKDNLLI 187

Query: 165  --------FDAAEAYESI----------------------LTGKREQRPQDFLDCIVDLR 194
                    FD   +Y  +                      ++G ++      L  I ++ 
Sbjct: 188  NASNDYDEFDEDVSYNKVDRNRYDTYNLSNRDHLEYSMGEMSGSQKTLSSQTLRFIGNIY 247

Query: 195  EYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLLEKRVDLLQRAEVHVCAFDIETTKLPLK 254
            E+DV Y  R  ID  +RCG WY+V         E  +D    A ++V A+DIE  K PLK
Sbjct: 248  EHDVKYINRVCIDLSIRCGTWYEVEREDFNVKFEP-MDKRSVAPLNVFAWDIECYKAPLK 306

Query: 255  FPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEG--YFKVTNVNNEIE 312
            FPD + D IM+IS M +GQGYLI+NR  V  DI +  Y P+ +  G   FK+ N   E +
Sbjct: 307  FPDMETDEIMLISVMFNGQGYLIVNRSIVSRDITEFLYRPREDIVGNAAFKIHNEKTERD 366

Query: 313  LLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDKNQGECRAKF 372
            LL  +F  +++++P I VTYNGD FD+P++  RA  +G  M++  GF    + G      
Sbjct: 367  LLTRFFTLVRQLRPQILVTYNGDNFDFPYVNRRAEINGLNMNKLAGFHL--SNGVFVNAA 424

Query: 373  ACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQMMASYSVS 432
              ++DC+ WV+RDSYLP GS+ LK V K  L Y P+E++PEDMV  A+  PQ +A YSVS
Sbjct: 425  VLNMDCYKWVERDSYLPFGSRTLKQVCKLMLKYSPVEIDPEDMVAMARTDPQKLAVYSVS 484

Query: 433  DAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVICPNKHQ 492
            DAVATY LY+ ++H FI +L+ I+P+ P+E+LR+G+GT+CE LLM +AY   ++ PNKH 
Sbjct: 485  DAVATYNLYIKFIHNFILALSYIVPLPPNEILRQGAGTMCENLLMAEAYGNGILLPNKHT 544

Query: 493  SDPEKFYRN------HLLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQLLNNLDR 546
                +FY N      HL+   TYIGG VE L  G+FR D    F+L  +AY+ L+NNLD 
Sbjct: 545  QKAIRFYTNPETEKQHLVYENTYIGGRVESLRCGIFRDDQEEQFELSAAAYDDLINNLDA 604

Query: 547  DLQYAIKVE-GKMDLESVSNYDEVKNAIMEKLLRLQEEPIREECPLIYHL-DVAAMYPNI 604
             L Y  K    K+  E +  Y+E  +       R   EP +    +  H  +   +Y  +
Sbjct: 605  LLIYWAKNNMSKITKEPLKLYEEEDDEEDGT--RRPGEPSKRLKKIFEHFENFEDVYREL 662

Query: 605  IL----------TNRLQPPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYY 654
             +             LQP +IVT++ C  C +      C ++++W  R E+    +S   
Sbjct: 663  YVRLCRLRDESSIKTLQPTAIVTEKFCEKCSYYSESHLCQKRMKWKQRLEVSPIDKSQIL 722

Query: 655  HLKKQIESEFVDGT--------------------------NGHLS-KSFLDLPKMEQQSR 687
             L + ++S    G                           NG ++ +++  L + EQ ++
Sbjct: 723  VLLQNLKSRTYQGAAASKNESRVKAEQEEDSDADSEELEGNGKVAFRTWDQLTEREQGAQ 782

Query: 688  LKDRLKKYCQKAYKRVLDKPVTELREAGICMRENSFYVDTVRSFRDRRYEYKGLNKVWKG 747
            L+  +K + QK +K+       ++ E+ IC REN FYV TV +FRDRRY +K L K  + 
Sbjct: 783  LQKAVKNHSQKIFKKTKIYKEADV-ESIICQRENHFYVQTVMTFRDRRYTFKHLKKEGEN 841

Query: 748  KLSEAKASGNS--IKIQEAQDMVVLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVV 805
            +L      G S  +K++  ++ +++ DSLQLA+KCILNSFYGYV R G+RWYSMEM  +V
Sbjct: 842  ELKALLKQGCSDPVKMKSVREKILINDSLQLAYKCILNSFYGYVKRTGSRWYSMEMGAIV 901

Query: 806  TYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLPGSFPE--NFTFKTKDLKKKLTISYPC 863
            TYTGA II +AR L+EKIG P+ELDTDGIWC+LP  FP   +  +  +   K + + Y  
Sbjct: 902  TYTGASIIDSARKLVEKIGIPIELDTDGIWCMLPDVFPAVLDLKYAAEGKTKTVELEYMT 961

Query: 864  VMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEFEVDGPYKAMILPASKEEGILIKK 923
             +LN+ +A   TNDQY  L D  +  Y T     I FE+DGP+ AM LPAS++   L+KK
Sbjct: 962  TVLNMLIANEWTNDQYLDLED--TGKYRTIKRNEIFFELDGPWHAMFLPASEKSEELLKK 1019

Query: 924  RYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFLHGSTIEECYSAVAAVANRWL 983
            RY V+N +  + ELKGFEIKRRGE++LI++FQ ++F ++L G+T E+ Y + A VA  + 
Sbjct: 1020 RYVVYNSNNQIVELKGFEIKRRGEMRLIQLFQEDIFPQYLLGATKEDAYQSAAKVALSYR 1079

Query: 984  DLLDNQGKDIADSELIDYISESSTMSKSLADYGEQKSCAVTTARRLSD-FLGDTMVKDKG 1042
             +L+ + +++ D +L + +    T+ K++ +   QK   +T ARRLS+ F  DT + D  
Sbjct: 1080 RVLETRAQELKDDDLFELLLSKKTVKKAVNEQPHQKCFGITAARRLSELFKNDTYLNDPN 1139

Query: 1043 LRCQYIVACEPQGTPVSERAVPVAIFETDAEIMKFYLRKWCK----TSSDVGIRSIVDWS 1098
            +   +++A  PQ  P + RA+P+  F+ +  +   YL KW K    T++ +  R I+DW 
Sbjct: 1140 IIMSFLLASHPQEAPRTARAIPIQTFKVEEAVRSQYLSKWLKIQLSTATKMSSRDILDWE 1199

Query: 1099 YYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLYKKVREKEDKFRQRKLVDIFSSLK 1158
            YYK+R+ + I K+I +PA MQ + NP+P +  P W+ KK    E+  RQR +V  F++ K
Sbjct: 1200 YYKERVDTQILKLICLPAIMQGLKNPIPEIEMPKWVKKKQAMMEN--RQRGIVTFFATTK 1257



 Score = 45.8 bits (107), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 97/555 (17%), Positives = 212/555 (38%), Gaps = 78/555 (14%)

Query: 1446 AHILWISDDGVPDLGGTSEEDECFAD-EVHQPV----LTYPGAYRKVSVELKIHH-LSVN 1499
            + +LW + +   DLG     +   +D ++H+       T PG YR    +++ +  +  N
Sbjct: 1751 SSLLWGTSEMGVDLGLIQASNLEHSDYDIHENENRLDFTIPGVYRCYGAKIRFNQSMMYN 1810

Query: 1500 ALLKSNQVNEMEGGGLFGFDQDMNSGPYNNELCGFDETTS------SAPAFRVVKQLIQR 1553
            A+L  ++        +  F     +   N E    D  T+         +F+++  +++ 
Sbjct: 1811 AILLQSK--------MMDFANHEKAETRNEEAAVVDLETNFHVSMFHPNSFKILGTMLEN 1862

Query: 1554 CLT---------DAVTSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAML 1604
             +          D  T  N+    +  +L  WL    S L+DP L+ +    M++    L
Sbjct: 1863 LMNSTNLVYQKVDYATFQNIVN--LCSYLKSWLSDARSILYDPALYSMALGAMKEYLKKL 1920

Query: 1605 LAEFR-KLGATIIFANFSKVIIDTGKFDLSAAKAYCDSLLKAL-QTRELFEWIELEPVHF 1662
            +         T I  + + +++++    ++  +      L  L  T+  F+ I  +    
Sbjct: 1921 VKHISVNHKLTTIHMDPTYMVVESDCISVTKGRTRVQEALTDLAATQSKFKNIPFQVEEE 1980

Query: 1663 WHSLLFMDQYNYGGIPARADESLDDDSQVDIVSSWNIAEYLPKEIQDHFVLVVSEFMYIP 1722
            + +++ +D+ NY       D S ++ S+     +    EY+P  ++      +      P
Sbjct: 1981 YVAMVQLDKVNYIRYKNYIDASRENCSE-----NLKALEYMPLAVEMFIRYFMKTIALDP 2035

Query: 1723 -WKHAQKLAASRA-SLQEGSSCTPSITVAAAENFESHI---VQYVKGEISSYFTGKLLSI 1777
             W+  +    S +    E +   P +           I   + Y   +  SYF+ +L  +
Sbjct: 2036 LWRSVRSFYESDSYEATEENYEPPKLVRTDFHKLAKKIHDRIYYDWYQPGSYFS-RLYEL 2094

Query: 1778 VRDAIHHMKKMN-NDQH------NSPGVMQTAANIHKVDAPLEFIKHVCAAFALDQNVQH 1830
            + D     +  + N +H        PG     ++    D  +E IK +     +D+++  
Sbjct: 2095 IADTETFARTFDKNSKHLKMDFPKLPGTKLQGSD----DWKVETIKLLLYIMQIDKSLDW 2150

Query: 1831 DVLVMRKNLLKYV-RVREFAPEAEFRD-----PCPSFILPNVICSYCNDCRDLDLCRDMA 1884
                +  +L + + ++     ++E+ D     P     L ++ C +C+   D+D+   ++
Sbjct: 2151 TNYSLISSLDEKIHKLYMLTSQSEYTDRNWKAPSRELKLASLRCGHCHMVSDIDIVSTLS 2210

Query: 1885 LLAQD--------WHCAMPQCGQPYDREVMENALLQIVRQRERLYHL-------QDLVCI 1929
            LL  +        W C +  C +P+D   +E  ++Q +      Y +       QD +C 
Sbjct: 2211 LLQNEEDETISYSWLCQI--CSKPFDSRQVEAKIIQYLENVFYAYQVSRASAIAQDSICP 2268

Query: 1930 RCNQVKAAHLAEQCA 1944
             C  VK  +    C+
Sbjct: 2269 SCRSVKTMYRRNSCS 2283


>gi|297263916|ref|XP_001086545.2| PREDICTED: DNA polymerase epsilon catalytic subunit A [Macaca
           mulatta]
          Length = 1471

 Score =  737 bits (1902), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 377/765 (49%), Positives = 507/765 (66%), Gaps = 47/765 (6%)

Query: 3   RRRWD--------RQDGRRTKKQKLIR----SAEEELEAKLGYDLFSEGDKRLGWLLTFA 50
           RRR D        R DG  +    L R       ++++ + G++   E  ++ GWL+   
Sbjct: 8   RRRADPGADGEASRDDGATSSVSALKRLERSQWTDKMDLRFGFERLKEPGEKTGWLINMH 67

Query: 51  SSSLEDEDTRKVYSCIDLYFVSQDGSTFKSKYKFRPYFYAATKEKMEMDVEAYLRRRYES 110
            + + DED R V S +D YF+  DGS FK    ++PYFY AT++  E +V ++L ++++ 
Sbjct: 68  PTEILDEDKRLV-SAVDYYFIQDDGSRFKVALPYKPYFYIATRKGCEREVSSFLSKKFQG 126

Query: 111 QIADIEILEKEDLDLKNHLSGLHKSYLKISFDTVQQLMDVKKDLLHVVERNQAKFDAAEA 170
           +IA +E + KEDLDL NHL GL ++Y+K+SF TV+ L+ V+K++   V++N+ +  A++A
Sbjct: 127 KIAKVETVPKEDLDLPNHLVGLKRNYIKLSFHTVEDLVKVRKEISPAVKKNREQDHASDA 186

Query: 171 YESILTG------------KREQRPQDFLDCIVDLREYDVPYHIRFAIDNDVRCGQWYDV 218
           Y ++L+             +  ++  D LD IVD+REYDVPYHIR +ID  +    WY+V
Sbjct: 187 YTALLSSVLQRGGVITDEEETSKKIADQLDNIVDMREYDVPYHIRLSIDLKIHVAHWYNV 246

Query: 219 SISSTGPLLE--KRVDLLQRAEVHVCAFDIETTKLPLKFPDADYDIIMMISYMLDGQGYL 276
                   +E  +R DL++R +  V AFDIETTKLPLKFPDA+ D IMMISYM+DGQGYL
Sbjct: 247 RYRGNAFPVEITRRDDLVERPDPVVLAFDIETTKLPLKFPDAETDQIMMISYMIDGQGYL 306

Query: 277 IINRECVGEDIEDLEYTPKPEFEGYFKVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDY 336
           I NRE V EDIED E+TPKPE+EG F V N  +E  L++ WF H+QE KP I VTYNGD+
Sbjct: 307 ITNREIVSEDIEDFEFTPKPEYEGPFCVFNEPDEAHLIQRWFEHVQETKPTIMVTYNGDF 366

Query: 337 FDWPFLETRAAHHGFKMSEELGFQCDKNQGECRAKFACHLDCFAWVKRDSYLPQGSQGLK 396
           FDWPF+E RAA HG  M +E+GFQ D +QGE +A    H+DC  WVKRDSYLP GS  LK
Sbjct: 367 FDWPFVEARAAVHGLSMQQEIGFQKD-SQGEYKAPQCIHMDCLRWVKRDSYLPVGSHNLK 425

Query: 397 AVTKAKLGYDPLEVNPEDMVRFAKEKPQMMASYSVSDAVATYYLYMTYVHPFIFSLATII 456
           A  KAKLGYDP+E++PEDM R A E+PQ +A+YSVSDAVATYYLYM YVHPFIF+L TII
Sbjct: 426 AAAKAKLGYDPVELDPEDMCRMATEQPQTLATYSVSDAVATYYLYMKYVHPFIFALCTII 485

Query: 457 PMSPDEVLRKGSGTLCEMLLMVQAYKANVICPNKHQSDPEKFYRN-HLLESETYIGGHVE 515
           PM PDEVLRKGSGTLCE LLMVQA+ AN+I PNK + +  K   + H+L+SETY+GGHVE
Sbjct: 486 PMEPDEVLRKGSGTLCEALLMVQAFHANIIFPNKQEQEFNKLTDDGHVLDSETYVGGHVE 545

Query: 516 CLESGVFRSDLPTSFKLDPSAYEQLLNNLDRDLQYAIKVEGKMDLESVSNYDEVKNAIME 575
            LESGVFRSD+P  F+++P+A++ LL  +++ L++AI+ E K+ +E V+N++EV + I  
Sbjct: 546 ALESGVFRSDIPCRFRMNPAAFDFLLQRVEKTLRHAIEEEEKVPVEQVTNFEEVCDEIKS 605

Query: 576 KLLRLQEEPIREECPLIYHLDVAAMYPNIILTNRLQPPSIVTDEVCTACDFNRPGKTCLR 635
           KL  L++ P R ECPLIYHLDV AMYPNIILTNRLQP ++V +  C ACDFN+PG  C R
Sbjct: 606 KLASLKDVPSRIECPLIYHLDVGAMYPNIILTNRLQPSAMVDEATCAACDFNKPGANCQR 665

Query: 636 KLEWVWRGEIFMGKRSDYYHLKKQIESE----------FVDGTNGHLSKSFLDLPKMEQQ 685
           K+ W WRGE     RS+Y+ ++ Q+ESE          F   + G + +S      +E  
Sbjct: 666 KMAWQWRGEFMPASRSEYHRIQHQLESEKFPALGCRVLFKIASRGQM-RSLAQFSYLEPG 724

Query: 686 SRLKDRLKKYCQKAYKRVLDKPVTELREAGICMRENSFYVDTVRS 730
           S     L  + Q  +K +    +   R A +      F +DTVRS
Sbjct: 725 SIRHIYLYHHAQ-GHKALFGIFIPSQRRASV------FVLDTVRS 762



 Score =  285 bits (729), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 179/603 (29%), Positives = 284/603 (47%), Gaps = 115/603 (19%)

Query: 1442 LARYAHILWISDDGVPDLGGTSEEDECFADEVHQPV---LTYPGAYRKVSVELKIHHLSV 1498
            L R+ H+LW+S    PDLGG   +D C   E        +   G Y  V VEL + +L+V
Sbjct: 919  LHRHNHLLWLSPTARPDLGGKEADDNCLVMEFDDQATVEINSSGCYSTVCVELDLQNLAV 978

Query: 1499 NALLKSNQVNEMEGGGLFGFDQD----------MNSGPYNNELCGFDETTSSAPAFRVVK 1548
            N +L+S+ VN++EG    G   D          +  G   +    +DET   +  FR++K
Sbjct: 979  NTILQSHHVNDVEGADSMGISFDVIQQASLEDMITGGQAASAPASYDETALCSNTFRILK 1038

Query: 1549 QLIQRCLTDAVTSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEF 1608
             ++   + +     N++AD  + H YRWL SP S LHDP LHR LH +M+K+F  L+ EF
Sbjct: 1039 SMVVGWVKEITQYHNIYADNQVMHFYRWLRSPSSLLHDPALHRTLHNMMKKLFLQLITEF 1098

Query: 1609 RKLGATIIFANFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLF 1668
            ++LG+++++ANF+++I+ T K  +  A AY + +  ++  +E+F  + +     W  LL+
Sbjct: 1099 KRLGSSVVYANFNRIILCTKKRRVEDAIAYVEYITSSIHAKEIFHSLTISFSRCWEFLLW 1158

Query: 1669 MDQYNYGGI----PARADESLDDDSQV-------------------------------DI 1693
            MD  NYGGI     +R    L D  +V                                +
Sbjct: 1159 MDPSNYGGIKGKVSSRVHHGLQDSQKVQGAEDEQENEDNEEERNGEEEEDAEESSVEDSL 1218

Query: 1694 VSSWNIAEYLPK--EIQDHFVLVVS--EFMYIPWKHAQKLAASRASLQEGSSCTPSITVA 1749
             ++WNI ++LP+    Q +F+++VS  EF     +  QK      +  E S   P +   
Sbjct: 1219 ENNWNILQFLPQAASCQSYFLMIVSGLEFANQAVQKIQKKVTGSRNSTELSEMFP-VLPG 1277

Query: 1750 AAENFESHIVQYVKGEISSYFTGKLLSIVRDAIHHMKKMNNDQHNSPGVMQTAANIHKVD 1809
            +     +  ++++K      +  K+LS+  +  + + K+N D                  
Sbjct: 1278 SHLLLNNPALEFIK------YVCKVLSLDTNITNQVNKLNRD------------------ 1313

Query: 1810 APLEFIKHVCAAFALDQNVQHDVLVMRKNLLKYVRVREFAPEAEFRDPCPSFILPNVICS 1869
                                         LL+ V V EF+ EA+FRDPC S++LP VIC 
Sbjct: 1314 -----------------------------LLRLVDVGEFSEEAQFRDPCRSYVLPEVICR 1344

Query: 1870 YCNDCRDLDLCRDM------ALLAQDWHCAMPQCGQPYDREVMENALLQIVRQRERLYHL 1923
             CN CRDLDLC+D       A+L Q W C+   C  PYD  V+E  L+++++++   + L
Sbjct: 1345 SCNFCRDLDLCKDSSFSEDGAVLPQ-WLCS--NCQAPYDSSVIEMTLVEVLQKKLMAFTL 1401

Query: 1924 QDLVCIRCNQVKAAHLAEQCACAGSFRCKEDASDFRSKMQIFLNIANRQGFQLLQECTSW 1983
            QDL+C++C  VK   +   C+CAG F        F  ++ IF NIA   G   L E   W
Sbjct: 1402 QDLICLKCRGVKETSMPVYCSCAGGFALTIHTQVFMEQIGIFRNIAQHYGMSYLLETLEW 1461

Query: 1984 ILE 1986
            +L+
Sbjct: 1462 LLQ 1464


>gi|312085173|ref|XP_003144573.1| DNA polymerase epsilon catalytic subunit [Loa loa]
          Length = 1613

 Score =  726 bits (1873), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 407/951 (42%), Positives = 567/951 (59%), Gaps = 57/951 (5%)

Query: 477  MVQAYKANVICPNKHQSDPEKFYRN-HLLESETYIGGHVECLESGVFRSDLPTSFKLDPS 535
            MV+A+  N+I PNK      K+  + H++ESETY+GG+VE LESGVFR+D+P  F++ P+
Sbjct: 1    MVKAFHNNIIFPNKSLPYGAKYASDGHVIESETYVGGYVEALESGVFRADIPEKFRIVPA 60

Query: 536  AYEQLLNNLDRDLQYAIKVEGKMDLESVSNYDEVKNAIMEKLLRLQEEPIREECPLIYHL 595
            A   L  N+ + L  ++  E  ++++ V N+D V + I  +L    + P+R E P IYHL
Sbjct: 61   AILDLKRNVRKTLSDSLTHEFGVNMDEVVNFDSVVSKIETQLDDFIKRPLRLETPKIYHL 120

Query: 596  DVAAMYPNIILTNRLQPPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYYH 655
            DV AMYPNIILTNRLQP ++VT+E C AC +N P   C R + W WRGEI    R +Y  
Sbjct: 121  DVGAMYPNIILTNRLQPSAVVTNEDCIACVYNSPDAKCRRTMRWEWRGEIMPASRGEYER 180

Query: 656  LKKQIESEFVDGTNGHLSKSFLDLPKMEQQSRLKDRLKKYCQKAYKRVLDKPVTELREAG 715
            + +Q+E+E    T G   ++F  L   ++      R+K +C++AY +       E R   
Sbjct: 181  ILQQLENE----TFGKPPRAFHSLDHDQRIQIEIKRVKDFCKRAYGKT-HITKNEYRYTT 235

Query: 716  ICMRENSFYVDTVRSFRDRRYEYKGLNKVWKGKLSEAKASGNSI-KIQEAQDMVVLYDSL 774
            IC REN+FYVDTV++FRDRRYEYK + K  K  L E   S + I  ++ AQ  VVLY+SL
Sbjct: 236  ICQRENAFYVDTVKAFRDRRYEYKAMLKKAKAVLDEV--SDDDIHALKTAQGRVVLYESL 293

Query: 775  QLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGI 834
            QLAHKCILNSFYGYVMRKGARW+SMEMAG+V +TGA II  AR L+E+IGKPLELDTDGI
Sbjct: 294  QLAHKCILNSFYGYVMRKGARWFSMEMAGIVCHTGANIITEARKLVERIGKPLELDTDGI 353

Query: 835  WCVLPGSFPENFTFKTKDLKKK-LTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETH 893
            WC++PG+FPEN TF   + K+K +TISYP  +LN  +    TN+Q+  L   +  TY   
Sbjct: 354  WCLIPGTFPENITFTLNNSKRKTVTISYPGAILNALIHDKFTNNQFHQL--ELDGTYSIT 411

Query: 894  SECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKV 953
            SE SI FEVDGPY AMILPAS+EEG  +KKRYAVFN DG+LAELKGFE+KRRGEL LIK 
Sbjct: 412  SENSIFFEVDGPYLAMILPASREEGKRLKKRYAVFNFDGSLAELKGFEVKRRGELALIKY 471

Query: 954  FQAELFDKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLA 1013
            FQ+ +F  FL G    E Y   A  AN WLD+L ++G  I D EL D I+E+ +MSK L 
Sbjct: 472  FQSSVFKAFLKGKNHPEAYEHAAKEANYWLDVLFSKGATIPDYELFDLIAENRSMSKKLD 531

Query: 1014 DYGEQKSCAVTTARRLSDFLGDTMVKDKGLRCQYIVACEPQGTPVSERAVPVAIFETDAE 1073
            DYGEQKS +++TA+RL++FLGD MVKD GL C++I++  P   PV++RA+P+AIF+    
Sbjct: 532  DYGEQKSTSISTAKRLAEFLGDDMVKDVGLACRFIISKMPLDAPVAQRAIPLAIFQAAPN 591

Query: 1074 IMKFYLRKWCK----TSSDVGIRSIVDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVV 1129
            +   YLRKW K    T  ++ IR+I+DW YY +R  + IQKII+IPAA+Q V NPVPRV 
Sbjct: 592  VSAHYLRKWTKDTTITKDNINIRNIIDWEYYIERFGATIQKIISIPAALQNVPNPVPRVP 651

Query: 1130 HPDWLYKKVREKEDKFRQRKLVDIFSSLKKDDFLNKTCNAETNLMD-----ENVEDLEDF 1184
             PDWL  K +++++  +Q K+ +IF       F     N  ++         NV  L + 
Sbjct: 652  FPDWLENKRQQRKNDHKQPKINEIFKKATTLAFTPDIENINSSRAASNSSLNNVTLLSNS 711

Query: 1185 PKKRRNSVNGPRPIVRCFEVNNEQKT--VKTTDQVDSLRQQLEPSEVSDQQPSSQNAIDT 1242
            P   ++S      +         Q +   K TD+ +   + L    V D        I  
Sbjct: 712  PNSEKDSSTTTTCVFLNVAAKQSQSSSLTKITDRWERFLRILMMKTVKD-------VIGF 764

Query: 1243 ENIDRIVDYKGWLELKKRKWKDNLDRRKKQKLGSLRASHQANGVSESLGDMINHKEAQRR 1302
            ++    V  + +L+ K +K +   +RRK+            N +S+ +            
Sbjct: 765  QS-SNFVTKRTYLKAKWQKERAEKNRRKQ------------NALSKGI------------ 799

Query: 1303 TGVGSYFRRQETAMTRCHWQIIQLVPSSQSGVFLAWVVVEGIMVRIPITVPRLFYLNSKD 1362
            T + S   R +  M    WQI+++  +   G+   W ++   M++I + +PR+ Y+N+++
Sbjct: 800  TPIMSMLERGKQMMRDTAWQIVKISETPSKGMLALWCIILDKMMKINLRMPRIIYVNNRE 859

Query: 1363 PIVEKFPGRRVNKTLPHGRRSFNLIEVMIDEDQFRKESKKLAALLADPEVE 1413
                   G  V + LP  +  FNL + +IDE  F     +L   L    +E
Sbjct: 860  E--NGNSGILVKRILPRLKPVFNLRQYVIDERIFESSLNQLNKELCAMRIE 908



 Score =  107 bits (268), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 74/253 (29%), Positives = 131/253 (51%), Gaps = 18/253 (7%)

Query: 1441 SLARYAHILWISDDGVPDLGGTSEEDECFADEVHQP---------VLTYPGAYRKVSVEL 1491
            SL    ++LW S    PDLGG  E D+   + V            V+        V +EL
Sbjct: 1155 SLINQGYVLWASPLSRPDLGG-KELDDTRLNAVWSSLSINKQSVCVVNESSFETDVCIEL 1213

Query: 1492 KIHHLSVNALLKSNQVNEMEGGG-LFGF------DQDMNSGPYNNELCGFDETTSSAPAF 1544
            ++  + V A+++S  + + EGG    GF        D   G Y   +  +DE  + A   
Sbjct: 1214 ELGAVDVTAIVQSASIADAEGGADSVGFLTGSVLSADALLG-YVRSIAQYDEGAAVAGPL 1272

Query: 1545 RVVKQLIQRCLTDAVTSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAML 1604
            +V++ L+  C+ D    G+  AD ++  L RWL + HS ++DP + R++  ++ K+  +L
Sbjct: 1273 KVLRLLLHDCIKDIHLYGSKIADQVIISLDRWLRTQHSLMYDPAIVRVVDILITKLILLL 1332

Query: 1605 LAEFRKLGATIIFANFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWH 1664
            +AE  +LG  +I+A+ S++I+ T +  L  A+++ +SLL +L+   +F  + ++ V FW 
Sbjct: 1333 VAELNRLGGRVIYASSSQLIMCTQRSTLEHAQSFVNSLLLSLENHAIFASLNVKAVKFWD 1392

Query: 1665 SLLFMDQYNYGGI 1677
             LL++D  +Y GI
Sbjct: 1393 ILLWVDANDYIGI 1405



 Score = 57.0 bits (136), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 41/157 (26%), Positives = 71/157 (45%), Gaps = 9/157 (5%)

Query: 1775 LSIVRDAIHHMKKMNNDQHNSPGVMQTAANIHKVDAPLEFIKHVCAAFALDQNVQHDVLV 1834
            L++VR+ +   ++M +  +N    +    N    D+ +  +K +     LD  V   V  
Sbjct: 1464 LNLVRNEV--TEQMFDFLNNLSSSVDIRENTDLRDSIILIVKGISHFIGLDCTVYESVAK 1521

Query: 1835 MRKNLLKYVRVREFAPEAEFRDPCPSFILPNVICSYCNDCRDLDLCRDMALLAQDWHCAM 1894
            +R  LL+ + V + + +  ++    S  L  + CS C    DLD+C+  A     W C  
Sbjct: 1522 LRYQLLRMLDVDDSSHDDTWQSLNVSCTLTQLFCSVCCQSNDLDVCQSEA-----WIC-- 1574

Query: 1895 PQCGQPYDREVMENALLQIVRQRERLYHLQDLVCIRC 1931
            P CG+ +    +E  L++ V Q    Y +QD  C RC
Sbjct: 1575 PSCGKQFHSSTIEQLLIERVNQLLIAYTIQDFKCTRC 1611


>gi|443710216|gb|ELU04510.1| hypothetical protein CAPTEDRAFT_97442, partial [Capitella teleta]
          Length = 706

 Score =  725 bits (1871), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 348/671 (51%), Positives = 477/671 (71%), Gaps = 13/671 (1%)

Query: 25  EELEAKLGYDLFSEGDKRLGWLLTFASSSLEDEDTRKVYSCIDLYFVSQDGSTFKSKYKF 84
           E+++ + G++   E  +++GWL+   SS + DED + V S +D YF+ +DG+ FK    F
Sbjct: 37  EDIDLRYGFERHKESSEKIGWLINMHSSEILDEDKQFV-SAVDYYFIQEDGNRFKVSLPF 95

Query: 85  RPYFYAATKEKMEMDVEAYLRRRYESQIADIEILEKEDLDLKNHLSGLHKSYLKISFDTV 144
           +PYFY AT++  E +V ++L +R+  +++ +E + KEDLDL NHL+ L + YLK+SF  V
Sbjct: 96  KPYFYVATRKGCEREVSSFLLKRFAGKLSSVETISKEDLDLDNHLTNLKQKYLKLSFLNV 155

Query: 145 QQLMDVKKDLLHVVERNQAKFDAAEAYESILTG--------KREQRPQDFLDCIVDLREY 196
            +LM VK++L   + +N+ +  A +AY ++LT            ++  D ++ I+ +REY
Sbjct: 156 DELMKVKRELFPAILKNKEQEKARDAYSTLLTSHLAGEEAVSVSKKISDQMENIIGIREY 215

Query: 197 DVPYHIRFAIDNDVRCGQWYDV-SISSTGPLLEKRVDLLQRAEVHVCAFDIETTKLPLKF 255
           DVPYH+R +ID  +  G WY V  ++   P +  R DL+ R E  V A+DIETTKLPLKF
Sbjct: 216 DVPYHVRVSIDLKIHVGLWYSVKGVAQGSPEITHREDLVDRPEPIVLAYDIETTKLPLKF 275

Query: 256 PDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNVNNEIELLR 315
           PDA  D +MMISYM+DGQGYLI NRE +  D+ED EYTP+PEFEG F V N  NE +LL+
Sbjct: 276 PDAQIDQVMMISYMIDGQGYLICNREIISHDVEDFEYTPRPEFEGPFIVFNEENEAQLLQ 335

Query: 316 LWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDKNQGECRAKFACH 375
            +F H+ EVKP I+VTYNGD+FDWPF+E RA+ HG  M +E+GFQ D +QGE  ++ A H
Sbjct: 336 KFFEHILEVKPNIFVTYNGDFFDWPFVEARASVHGLDMLQEIGFQKD-SQGEYGSRPAIH 394

Query: 376 LDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQMMASYSVSDAV 435
           +D F WVKRDSYLP GSQGLKAV KAKL YDP+E++PEDM R A E+PQ++A+YSVSDAV
Sbjct: 395 MDAFKWVKRDSYLPVGSQGLKAVAKAKLRYDPVELDPEDMCRMASEQPQVLATYSVSDAV 454

Query: 436 ATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVICPNKHQSDP 495
           ATYYLYM YVHPFIF+L TIIPM PDEVLRKGSGTLCE LLMVQA+ AN++ PNK ++  
Sbjct: 455 ATYYLYMKYVHPFIFALCTIIPMEPDEVLRKGSGTLCEALLMVQAFHANIVFPNKQEAVL 514

Query: 496 EKFYRN-HLLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQLLNNLDRDLQYAIKV 554
            K   + H+LESETY+GGHVE LESGVFR+++P  F++ P A++ L+  ++  + +AI  
Sbjct: 515 NKMTPDGHILESETYVGGHVEALESGVFRANIPCRFRMVPEAFQNLIQKVEATMIHAITE 574

Query: 555 EGKMDLESVSNYDEVKNAIMEKLLRLQEEPIREECPLIYHLDVAAMYPNIILTNRLQPPS 614
           E K+ L+SV+N+ E+ + + EKL  L++ P R E P+IYHLDVAAMYPNIILTNRLQPP+
Sbjct: 575 EEKIPLDSVTNFKEICDDVTEKLSVLRDCPNRLESPIIYHLDVAAMYPNIILTNRLQPPA 634

Query: 615 IVTDEVCTACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYYHLKKQIESE-FVDGTNGHLS 673
           IV +  C ACDFN+P   C R ++W WR E     R++Y+ ++ Q+E+E F     G   
Sbjct: 635 IVDEATCAACDFNKPDAPCQRNMKWAWRAEHLPANRNEYHRIQHQLENEKFPPQFPGGQP 694

Query: 674 KSFLDLPKMEQ 684
           ++F  LP++EQ
Sbjct: 695 RAFHQLPRVEQ 705


>gi|114306822|dbj|BAF31292.1| DNA polymerase epsilon catalytic subunit [Xenopus laevis]
          Length = 674

 Score =  720 bits (1858), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 352/665 (52%), Positives = 467/665 (70%), Gaps = 26/665 (3%)

Query: 4   RRWDRQDGRRTKKQKLIRSAEEELE---------AKLGYDLFSEGDKRLGWLLTFASSSL 54
           R   R DG+  +      SA + LE         A+ G++   E  ++ GWLL    + +
Sbjct: 10  RAESRGDGQNQQDDASASSAAKRLERSQWTDKIDAQYGFERIREPGEKTGWLLNMHPNEI 69

Query: 55  EDEDTRKVYSCIDLYFVSQDGSTFKSKYKFRPYFYAATKEKMEMDVEAYLRRRYESQIAD 114
            DED R V S +D YF+ +DGS FK    ++PYFY ATK+  E +V ++L ++++ ++A 
Sbjct: 70  LDEDKRLV-SAVDYYFIQEDGSRFKVALPYKPYFYVATKKGCEREVSSFLSKKFQGKLAK 128

Query: 115 IEILEKEDLDLKNHLSGLHKSYLKISFDTVQQLMDVKKDLLHVVERNQAKFDAAEAYESI 174
            E + KEDLDL NHL GL + Y+K+SF +V  L+ V+K++   V +N+ +  A++ Y ++
Sbjct: 129 SETIPKEDLDLPNHLVGLKRGYIKLSFHSVDDLIKVRKEISPAVRKNKERDHASDTYTAM 188

Query: 175 LT--------GKREQRPQ----DFLDCIVDLREYDVPYHIRFAIDNDVRCGQWYDVSI-- 220
           L+        G  E+ P     D ++ IVD+REYDVPYH+R +ID  +    WY++    
Sbjct: 189 LSSALTGNNMGAEEEGPSKKISDQMENIVDMREYDVPYHVRVSIDLKIHVAHWYNIRYRG 248

Query: 221 SSTGPLLEKRVDLLQRAEVHVCAFDIETTKLPLKFPDADYDIIMMISYMLDGQGYLIINR 280
           SS+ P + +R DL++R +  V AFDIETTKLPLKFPDA+ D IMMISYM+DGQGYLI NR
Sbjct: 249 SSSPPEITRRDDLVERPDPVVMAFDIETTKLPLKFPDAETDQIMMISYMIDGQGYLITNR 308

Query: 281 ECVGEDIEDLEYTPKPEFEGYFKVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWP 340
           E V EDIED E+TPKPE+EG F + N  +E  L++ WF H+QE KP I VTYNGD+FDWP
Sbjct: 309 EIVSEDIEDFEFTPKPEYEGPFCIFNEADEAHLIQRWFEHIQETKPNIIVTYNGDFFDWP 368

Query: 341 FLETRAAHHGFKMSEELGFQCDKNQGECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTK 400
           F+ETRA  HG  M +E+GFQ D NQGE ++    H+DC  WVKRDSYLP GS  LKA  K
Sbjct: 369 FVETRATVHGMSMLQEIGFQKD-NQGEYKSPPCIHMDCLRWVKRDSYLPVGSHNLKAAAK 427

Query: 401 AKLGYDPLEVNPEDMVRFAKEKPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSP 460
           AKLGYDP+E++PE+M R A E+PQ++A+YSVSDAVATYY+YM YVHPFIF+L TIIPM P
Sbjct: 428 AKLGYDPVELDPEEMCRMATEEPQVLATYSVSDAVATYYMYMKYVHPFIFALCTIIPMEP 487

Query: 461 DEVLRKGSGTLCEMLLMVQAYKANVICPNKHQSDPEKFYRN-HLLESETYIGGHVECLES 519
           DEVLRKGSGTLCE LLMVQAY AN++ PNK ++   K   + H+L+SETY+GGHVE LES
Sbjct: 488 DEVLRKGSGTLCEALLMVQAYHANIVFPNKQETVFNKLTNDGHVLDSETYVGGHVEALES 547

Query: 520 GVFRSDLPTSFKLDPSAYEQLLNNLDRDLQYAIKVEGKMDLESVSNYDEVKNAIMEKLLR 579
           GVFRSD+P  FK++P+A++ LL  ++  L++AI+ E K+ LE ++N+ EV + I +KL  
Sbjct: 548 GVFRSDIPCRFKMNPAAFDFLLQRVELTLRHAIEEEEKIPLEQITNFQEVCDEIKKKLNS 607

Query: 580 LQEEPIREECPLIYHLDVAAMYPNIILTNRLQPPSIVTDEVCTACDFNRPGKTCLRKLEW 639
           L+E P R ECPLIYHLDV AMYPNIILTNRLQP ++V +  C ACDFN+PG  C R++ W
Sbjct: 608 LKEVPNRIECPLIYHLDVGAMYPNIILTNRLQPSAMVDEVTCAACDFNKPGAACQRQMTW 667

Query: 640 VWRGE 644
            WRGE
Sbjct: 668 QWRGE 672


>gi|71029614|ref|XP_764450.1| DNA polymerase epsilon, catalytic subunit A [Theileria parva strain
            Muguga]
 gi|68351404|gb|EAN32167.1| DNA polymerase epsilon, catalytic subunit A, putative [Theileria
            parva]
          Length = 1430

 Score =  720 bits (1858), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 451/1208 (37%), Positives = 658/1208 (54%), Gaps = 148/1208 (12%)

Query: 64   SCIDLYFVSQDGSTFKSKYKFRPYFYAATKEKMEMDVE-AYLRRRYESQIADIEILE--- 119
            S + ++FVS+DG+ + +   + PYFY +   +  MD+   +L   + S      +LE   
Sbjct: 75   SALTMHFVSEDGTEWSTSLIYSPYFYISVLREELMDIALQFLYNNFRSHSIGPVLLEPCR 134

Query: 120  KEDLDLKNHLS------GLHKSYL----KISFDTVQQLMDVKKDLLHVVER--------N 161
            + DL L NHL       G+ K  L    KISF T+ QL +  +D++  ++R        N
Sbjct: 135  RIDLSLPNHLEKVDPVEGVSKHNLAKLIKISFKTIDQL-ERGRDMIISLKRQFEKDNQIN 193

Query: 162  QAKFDAAEAYESILTGKREQRPQ---------------------------DFLDCIVDLR 194
            ++K +  E  E + T   + + Q                             L  I DL 
Sbjct: 194  ESKNEYDEFDEDVFTSNYQSKTQYDTFNTGSKDNEISVDGMGLTQKYASNSVLRIIGDLY 253

Query: 195  EYDVPYHIRFAIDNDVRCGQWYDVSIS----STGPLLEKRVDLLQRAEVHVCAFDIETTK 250
            E+DV Y  R  ID  +RCG WY+V       S  PL +  V  L     +V A+DIE  K
Sbjct: 254  EHDVLYINRVCIDLGIRCGTWYEVRREDFNVSVTPLEKTSVPPL-----NVFAWDIECYK 308

Query: 251  LPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGY--FKVTNVN 308
             PLKFPD + D IM+IS M +GQGYLI+NR  V  DIE+  Y P+ +  G   FK+ N  
Sbjct: 309  APLKFPDMETDEIMLISVMFNGQGYLIVNRTIVSRDIEEFLYQPREDIVGNACFKIYNER 368

Query: 309  NEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDKNQGEC 368
             E +LL  +F  +  +KP I+VTYNGD FD+P++  RA  +G  M++  G        + 
Sbjct: 369  TERDLLMRFFYLINYLKPHIFVTYNGDNFDFPYVNRRAEINGIHMNKVSGLHLSSELFQH 428

Query: 369  RAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQMMAS 428
             +    ++DC+ WV+RDSYLP GS+ LK V K  L Y+P+E++PEDMV  A+  PQ +A 
Sbjct: 429  AS--ILNMDCYKWVERDSYLPFGSRTLKQVCKLMLKYNPVEIDPEDMVHLARVTPQKLAV 486

Query: 429  YSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVICP 488
            YSVSDAVATY+LYM ++H FI +L+ I+P++P+EVLR+G+GTLCE LLM QAY  N++ P
Sbjct: 487  YSVSDAVATYHLYMKFIHNFILALSYIVPLAPNEVLRQGAGTLCENLLMAQAYANNILFP 546

Query: 489  NKHQSDPEKFY------RNHLLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQLLN 542
            NKH     +FY      R HL+   TYIGG VE L  G+FR D   +F+L  + Y+ L+N
Sbjct: 547  NKHIQKAIRFYTNPETERQHLVYENTYIGGRVESLRCGIFRDDQAENFELSAATYDDLIN 606

Query: 543  NLDRDLQYAIKVEGKM---------------DLESVSNYDEVKNAIMEKLLRLQEEPIRE 587
            NL+  L Y  K    +               D    S  D   N + E+      EP+ E
Sbjct: 607  NLENSLIYWAKHSNIISTIGDNTRVEDFTMADNSQSSATDNTNNIVTEET---HVEPVAE 663

Query: 588  ECP------------LIYHLD-VAAMYPNIIL--------TNRLQPPSIVTDEVCTACDF 626
              P            +    D    +Y  + +          RLQP +IV ++ C  C +
Sbjct: 664  RVPEPVGTPSARLRRIFSRFDNFDQVYKELWVRLSRLRDEPTRLQPTAIVDEKFCEKCSY 723

Query: 627  NRPGKTCLRKLEWVWRGEIFMGKRSD--------------------YYHLKKQIESEFVD 666
                + C +++ W  R EI    +S                     Y+H +   +SE   
Sbjct: 724  YSESERCQKRMRWKQRLEISPIDKSQILVVMQNLKARTYQPSEMSFYHHEEAAEDSEAES 783

Query: 667  GTNGHLSK----SFLDLPKMEQQSRLKDRLKKYCQKAYKRVLDKPVTELREAGICMRENS 722
             T  +  K    ++  L + E+ + L+  +K   QK +K+       ++ E+ IC REN 
Sbjct: 784  DTPENEPKLKLRTWDQLTEREKGAHLQRAVKACSQKIFKKTRIYKEADV-ESIICQRENH 842

Query: 723  FYVDTVRSFRDRRYEYKGLNKVWKGKLSEAKASG--NSIKIQEAQDMVVLYDSLQLAHKC 780
            FYV TV++FRDRRY +K L K  + +L E   +G  + + ++  ++ +++ DSLQLA+KC
Sbjct: 843  FYVQTVQTFRDRRYAFKHLKKEGENELKELIKNGCTDPVLMKTVREKILINDSLQLAYKC 902

Query: 781  ILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLPG 840
            ILNSFYGYV R G+RWYSMEM  +VTYTGA II +AR LIEKIG P+ELDTDGIWC+LP 
Sbjct: 903  ILNSFYGYVKRTGSRWYSMEMGAIVTYTGASIIDSARKLIEKIGIPIELDTDGIWCMLPD 962

Query: 841  SFPE----NFTFKTK--DLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHS 894
             FP      +T  T   D KK + + Y   +LN+ +A   TN+QY  L D  S  Y T  
Sbjct: 963  IFPAVLDLTYTVHTPEGDKKKSVELEYMTTVLNMLIAEEWTNEQYLDLED--SGRYVTVQ 1020

Query: 895  ECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVF 954
            +  I FE+DGP+ AM LPAS++   L+KKRY V+N +G + ELKGFEIKRR E+++I++F
Sbjct: 1021 KNEIFFELDGPWHAMFLPASEKSEELLKKRYVVYNHNGQIVELKGFEIKRRSEMRMIQLF 1080

Query: 955  QAELFDKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLAD 1014
            Q ++F ++L G T E+ Y   A VA  +  +LD +  D+AD +L D +    T+ K++ +
Sbjct: 1081 QEDIFPQYLMGQTKEQAYQNAAKVAVSYRKILDTRASDLADDDLFDLLLSKKTVRKAVIE 1140

Query: 1015 YGEQKSCAVTTARRLSD-FLGDTMVKDKGLRCQYIVACEPQGTPVSERAVPVAIFETDAE 1073
               QK   +T+ARRLS+ F  DT + D  L   +++A +P   P + RA+P+  F+ D  
Sbjct: 1141 QPHQKCFGITSARRLSELFKNDTYLNDANLSMSFLLASQPSDAPRTARAIPIQTFKVDKT 1200

Query: 1074 IMKFYLRKWCK----TSSDVGIRSIVDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVV 1129
            +   +L KW K    T+  +  R I+DW+YYK+R+ + I K++ +PA MQ + NPVP+V 
Sbjct: 1201 VRSQFLAKWLKIQLSTAMRMSSRDILDWNYYKERIDTQILKLVVLPAIMQGLVNPVPQVE 1260

Query: 1130 HPDWLYKK 1137
             P W+ +K
Sbjct: 1261 LPKWVKRK 1268


>gi|68068807|ref|XP_676314.1| DNA polymerase epsilon, catalytic subunit a [Plasmodium berghei
            strain ANKA]
 gi|56495956|emb|CAH95954.1| DNA polymerase epsilon, catalytic subunit a, putative [Plasmodium
            berghei]
          Length = 1242

 Score =  664 bits (1714), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 368/906 (40%), Positives = 540/906 (59%), Gaps = 82/906 (9%)

Query: 334  GDYFDWPFLETRAAHHGFKMSEELGFQCDKNQGECRAKFACHLDCFAWVKRDSYLPQGSQ 393
            G  +D P+L  R   +   + +E+GF  + N+ EC   F  ++D + WV+RDSYLP GS+
Sbjct: 2    GICYDIPYLCRRCEINNISVPKEIGFIMN-NKKECSCNFILNIDAYKWVERDSYLPNGSR 60

Query: 394  GLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQMMASYSVSDAVATYYLYMTYVHPFIFSLA 453
             LK+V K KL Y+P EV+PE MV  A+  PQ +A YSVSDAVAT+YLY  ++H F+F+L 
Sbjct: 61   TLKSVCKIKLKYNPTEVDPELMVPIARNNPQHLAVYSVSDAVATFYLYDKFIHSFLFALC 120

Query: 454  TIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVICPNKHQSDPEKFY------RNHLLESE 507
            +IIPM+PD VLR+GSGTLCE LLM +AYK N++ PNK +    +++      + + +  +
Sbjct: 121  SIIPMNPDNVLRQGSGTLCEQLLMAEAYKKNILFPNKSKPIYNQYFTDVNNKKKYFIYDD 180

Query: 508  TYIGGHVECLESGVFRSDLPTSFKLDPSAYEQLLNNLD--------RDLQYAIKVEGK-- 557
            +++GG V+ L+ G++R DL  +F L+   Y+ LLNN+D        +DL   + +  K  
Sbjct: 181  SFVGGKVQSLKCGIYRDDLKENFHLNSDTYKYLLNNVDNIIDFWIQKDLNKNLNINDKKY 240

Query: 558  MDLESVSNYDEVKNAIMEKLLRLQEEPIREECPLIYHLDVAAMYPNIILTNRLQPPSIVT 617
            +  + + N + +KN I++KL    + P    CP IYHLDVAAMYPNIIL++RLQP +I+T
Sbjct: 241  VSKKQILNLENIKNDIIQKLTFFIQNPNISSCPNIYHLDVAAMYPNIILSHRLQPNAIIT 300

Query: 618  DEVCTACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYYH---LKKQIESEFVDGTNGHL-- 672
             + C  C + +    C +K+ W  + EI      DY H   LK+ +++      N +   
Sbjct: 301  PDHCFNCSYYKQRHLCQKKMIWKRKLEI---SPIDYGHILSLKQDLKTRLFYPQNPYFKM 357

Query: 673  ---------------------SKSFLDLPKMEQQSRLKDRLKKYCQKAYKRVLDKPVTEL 711
                                  KS+ +L + +Q   L   +K+  QK +K+   K   E+
Sbjct: 358  ENNEDSESTANDAVMKPMVNKKKSWNELTEKQQHDELMKVIKECSQKVFKKT--KLAKEV 415

Query: 712  REAG-ICMRENSFYVDTVRSFRDRRYEYK-GLNKVWKGKLSEAKASG-NSIKIQEAQDMV 768
              +  IC REN FYVDTV++FRDRRY YK GL +    K    K S  + +KI E  + +
Sbjct: 416  DASSLICQRENPFYVDTVKTFRDRRYVYKRGLKECEHEKRELLKQSKIDYVKIHELDEKI 475

Query: 769  VLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLE 828
            +L DSLQLAHKCILNSFYGYV RK +RWYS +M  VVTYTG++II +A  LI+KIG P+E
Sbjct: 476  LLNDSLQLAHKCILNSFYGYVKRKSSRWYSDQMGAVVTYTGSQIINDAFKLIDKIGIPME 535

Query: 829  LDTDGIWCVLPGSFPENFTFKTKDLKKKLTIS----------------------YPCVML 866
            LDTDGIWC+LP  FPE +     D  +   I                       +P  +L
Sbjct: 536  LDTDGIWCMLPKRFPEIYDVYILDKDELNNIKQYENMTEDAIKNNKNIKKMNFEFPTNIL 595

Query: 867  NVDVARNNTNDQYQTLVDPVSKTYETHSECSIEFEVDGPYKAMILPASKEEGILIKKRYA 926
            N+++ +  TN+QY  + +  +  Y+  S+  I FE+DGP+ +M LPAS++   L+KKRY 
Sbjct: 596  NLEMHKKWTNNQY-LVYNEKTNDYDCISKNEIFFELDGPWHSMFLPASEKSDDLLKKRYV 654

Query: 927  VFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFLHGSTIEECYSAVAAVANRWLDLL 986
            VFND   ++ELKGFEIKRRGEL++I+ FQ+E+F+ FL G T EE Y   +  AN+W +L+
Sbjct: 655  VFNDKYQISELKGFEIKRRGELRIIQRFQSEIFNNFLKGKTKEESYYYASLTANKWKNLI 714

Query: 987  DNQGKDIA-DSELIDYISESSTMSKSLADYGEQKSCAVTTARRLSDFLGDT-MVKDKGLR 1044
            D++  DI  D EL D I     ++KS+ +    KS  +TTA+RLS+ L +T  ++D  + 
Sbjct: 715  DSKAIDIENDDELFDLILAKKVLNKSVKEQPNAKSLGITTAKRLSELLSNTSYIEDNNVS 774

Query: 1045 CQYIVACEPQGTPVSERAVPVAIFETDAEIMKFYLRKWCKT----SSDVGIRSIVDWSYY 1100
             Q+IVA +P G+ V+ RA+P+ IF+T+ +   FYL KW       +  V +R I+DW YY
Sbjct: 775  TQFIVASKPIGSDVTFRAIPIQIFKTNVDTQIFYLSKWLSMQFPPNVPVNVRDIIDWDYY 834

Query: 1101 KQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLYKKVREKEDKFRQRKLVDIFSSLKKD 1160
            KQ+L   I K++ IPA  Q ++NP+  +  PDWL K++   E+K  Q+K+   F   +K 
Sbjct: 835  KQKLEVQILKLVIIPAIKQNINNPITSISIPDWLEKQINISEEK--QKKITSFFLKKEKP 892

Query: 1161 DFLNKT 1166
            + L+ T
Sbjct: 893  EMLSNT 898


>gi|341897453|gb|EGT53388.1| hypothetical protein CAEBREN_30414 [Caenorhabditis brenneri]
          Length = 677

 Score =  632 bits (1631), Expect = e-178,   Method: Compositional matrix adjust.
 Identities = 324/661 (49%), Positives = 436/661 (65%), Gaps = 22/661 (3%)

Query: 9   QDGRRTKKQKLIRSAEEELEAKLGYDLFSEGDKRLGWLLTFASSSLEDEDTRKVYSCIDL 68
            D    ++  LIRS  +E++AKLG+  ++   ++ G+L+    S L DE T+ + S +D 
Sbjct: 14  NDANYKERLALIRS-NDEIDAKLGFVRYTGIQEKKGFLINIQPSELVDEQTKVIVSVVDY 72

Query: 69  YFVSQDGSTFKSKYKFRPYFYAATKEKMEMDVEAYLRRRYESQIADIEILEKEDLDLKNH 128
           +F+S     FK  Y FRPYFY AT +  E  V +YL ++Y +Q   +E +EKEDLDLK+H
Sbjct: 73  FFISDMDERFKISYPFRPYFYIATIDGFEFQVSSYLSKKYGAQ-THVEHVEKEDLDLKDH 131

Query: 129 LSGLHKSYLKISFDTVQQLMDVKKDLLHVVERNQAKFDAAEAYESILT----GK------ 178
           LSGL K+Y+K+SF +  +L  V+KDL+ ++ +N  +     AY   L     GK      
Sbjct: 132 LSGLQKTYIKLSFTSTVELQKVRKDLMPLIRKNTDRIKKESAYADYLARNLGGKGAASSG 191

Query: 179 REQRPQDFLDCIVDLREYDVPYHIRFAIDNDVRCGQWYDVSISSTG--PLLEKRVDLLQR 236
            E    D L+ IVD+REYDVP+H+R +ID  +  G WYDV        P ++K+      
Sbjct: 192 AEVLDGDILNQIVDIREYDVPFHMRVSIDEKIFVGLWYDVKGVGPNRVPTIKKKDLAFFH 251

Query: 237 AEVHVCAFDIETTKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKP 296
           A+  V AFDIETTKLPLKFPD + D IMMISYM+DG+G+LIINRE V  DI   EYTPKP
Sbjct: 252 AKPKVLAFDIETTKLPLKFPDRESDEIMMISYMVDGRGFLIINREIVSADINAFEYTPKP 311

Query: 297 EFEGYFKVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEE 356
           E++G F V N  +E  L+R +F H  +V+P I VTYNGD+FDWPF+E RA   GF M  E
Sbjct: 312 EYKGEFTVWNEKDETALIRKFFDHFLQVRPNIVVTYNGDFFDWPFVEARAKIRGFNMERE 371

Query: 357 LGFQCDKNQGECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMV 416
           +GF  D +  E +++   H+D F WVKRDSYLP GSQ LKAVTKAKL YDP+EV PE M 
Sbjct: 372 IGFSKD-SADEYKSRNCIHMDAFRWVKRDSYLPVGSQNLKAVTKAKLRYDPVEVEPELMC 430

Query: 417 RFAKEKPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLL 476
           + A+E+PQ +A+YSVSDAV+TYYLYM YVHPF+F+L TIIP+  D+VLRKGSGTLCE LL
Sbjct: 431 KMAREQPQQLANYSVSDAVSTYYLYMKYVHPFVFALCTIIPLGADDVLRKGSGTLCEALL 490

Query: 477 MVQAYKANVICPNKHQSDPE-KFYRN-HLLESETYIGGHVECLESGVFRSDLPTSFKLDP 534
           MV+A+  N++ PNK+    E KF ++ H +ESETY+GGHVE LE+GVFR+D+P  F+L  
Sbjct: 491 MVEAFHCNIVFPNKYTGPEETKFSKDGHRVESETYVGGHVEALEAGVFRADIPARFRLQL 550

Query: 535 SAYEQLLNNLDRDLQYAIKVEGKMDLESVSNYDEVKNAIMEKLLRLQEEPIREECPLIYH 594
            A +QL + +   L+  +  E ++ L+ V ++DE    + +    L   P R E P IYH
Sbjct: 551 DALQQLKSEVQETLKKELAREFEVSLDQVVDFDEQCAEVEQAFDGLIAAPTRLENPRIYH 610

Query: 595 LDVAAMYPNIILTNRLQPPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYY 654
           LDV AMYPNIILTNRLQP ++V +E+C  C +N+P   C R + W WRGE+     S+Y+
Sbjct: 611 LDVGAMYPNIILTNRLQPCAMVNEEICMGCSYNKPDAECKRTMAWEWRGEL-----SEYF 665

Query: 655 H 655
           +
Sbjct: 666 Y 666


>gi|389595221|ref|XP_003722833.1| putative DNA polymerase epsilon catalytic subunit [Leishmania major
           strain Friedlin]
 gi|323364061|emb|CBZ13067.1| putative DNA polymerase epsilon catalytic subunit [Leishmania major
           strain Friedlin]
          Length = 2304

 Score =  615 bits (1586), Expect = e-173,   Method: Compositional matrix adjust.
 Identities = 318/652 (48%), Positives = 412/652 (63%), Gaps = 28/652 (4%)

Query: 38  EGDKRLGWLLTFASSS---LEDEDT----RKVYSCIDLYFVSQDGSTFKSKYKFRPYFYA 90
           E   R+GWL  +  ++    E+ED         + + L F    G TF     + PY   
Sbjct: 6   ESGTRVGWLFNYHPTTEVLQEEEDAFTGEGAQRAVLVLLFQDLAGDTFYVHLHYDPYILV 65

Query: 91  ATKEKMEMDVEAYLRRRYESQI-ADIEILEKEDLDLKNHLSGLHKSYLKISFDTVQQLMD 149
              E  E +VE  L   +  QI ++I  +EKEDLDL NHLSG  + YLK+ F  VQ L  
Sbjct: 66  QAVEGHEREVELGLMSTFGQQIISEIVAVEKEDLDLVNHLSGKKRVYLKVVFRNVQDLTT 125

Query: 150 VKKDLLHVVERNQAKFDAAEAYESILTGK---------------REQRPQDFLDCIVDLR 194
           V+  L   V+ N A   +     S  +G                       ++D + D+R
Sbjct: 126 VRGRLEKTVKLN-ASLGSENPLRSQFSGSLGDAMAKTFAEDPLYSAAGSGRWMDWVQDIR 184

Query: 195 EYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLLEKRVD-LLQRAEVHVCAFDIETTKLPL 253
           EYDV YH+R AID  V CG WYDV+++  G  +++  D     A   V AFDIETTK PL
Sbjct: 185 EYDVKYHMRVAIDMKVYCGLWYDVTVTEGGARVQRCDDSRYAPAMPRVIAFDIETTKAPL 244

Query: 254 KFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNVNNEIEL 313
           +FP  + D + MISYMLDG+GYLIINRE V EDI   EYTPKPE+EG+F   N  NE   
Sbjct: 245 RFPQPEVDEVYMISYMLDGRGYLIINREIVTEDIAPFEYTPKPEYEGFFDTFNEENEAAT 304

Query: 314 LRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDKNQGECRAKFA 373
           LR +F  M++ KP +YVTYNGDYFD+PF+  RA +HG  M  E+GF      G    K  
Sbjct: 305 LRRFFDEMRKYKPNVYVTYNGDYFDFPFIHARALYHGMNMRNEIGF-TQMADGAFLNKQI 363

Query: 374 CHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQMMASYSVSD 433
            HLDCF WVKRDSYLPQGSQGLKAVTK KLGY+P+EV+PEDM+  A+ +PQ MASYSVSD
Sbjct: 364 PHLDCFYWVKRDSYLPQGSQGLKAVTKYKLGYEPIEVDPEDMLPLAQSQPQRMASYSVSD 423

Query: 434 AVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVICPNKHQS 493
           AV+T+YLY  YVHPFIFSLATIIPM PD+VLRKGSG LCE LLMVQA   NV+ PNK + 
Sbjct: 424 AVSTWYLYQKYVHPFIFSLATIIPMPPDDVLRKGSGGLCESLLMVQAEANNVVFPNKKEI 483

Query: 494 DPEKFYRNHLLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQLLNNLDRDLQYAIK 553
           + E+FY  HL+++ETYIGG VE L SGV+RSD+P +F ++P  Y+ L++++D  L++ ++
Sbjct: 484 ERERFYEGHLIDTETYIGGRVEALRSGVYRSDIPMTFDMNPDTYQSLMDDVDEALRFTLE 543

Query: 554 VEGKMDLESVSNYDEVKNAIMEKLLRLQEEPIREECPLIYHLDVAAMYPNIILTNRLQPP 613
           VE  + +E V+N +EV+ A++ KL  L++ P ++E P IYHLDV AMYPNIILTNRLQP 
Sbjct: 544 VENGVKVEEVTNLEEVRAAVLAKLTNLRDRPHQQEKPFIYHLDVGAMYPNIILTNRLQPY 603

Query: 614 SIVTDEVCTACDFNRPGK--TCLRKLEWVWRGEIFMGKRSDYYHLKKQIESE 663
           +I   +VC  C FN P     C R + W WR E+F   R ++  +K Q+E+E
Sbjct: 604 AIARPDVCAGCCFNSPNNEAQCKRVMSWKWRAELFTAGRYEFQRVKAQLENE 655



 Score =  525 bits (1352), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 266/487 (54%), Positives = 352/487 (72%), Gaps = 11/487 (2%)

Query: 674  KSFLDLPKMEQQSRLKDRLKKYCQKAYKRVLDKPVTELREAGICMRENSFYVDTVRSFRD 733
            K++  L +  Q + LK RL +Y +KAY ++ +     +R   +C RENSFYVDTVR FRD
Sbjct: 751  KAYHKLNENTQFNMLKRRLSEYSRKAYGKIHETREV-MRSNVVCQRENSFYVDTVRLFRD 809

Query: 734  RRYEYKGLNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHKCILNSFYGYVMRKG 793
            RRYEYK   K WK +L  AK   +S + +  Q   V  +SLQLAHKCILNSFYGYVMRKG
Sbjct: 810  RRYEYKAALKTWKKRLDAAK---DSDERKVCQSRCVQMESLQLAHKCILNSFYGYVMRKG 866

Query: 794  ARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLPGSFPENFTFKTKDL 853
            +RW SMEMAG+VTY GA +IQ AR L+++IG  LELDTDGIWC LP +FPENFT  T + 
Sbjct: 867  SRWSSMEMAGIVTYLGATLIQMARSLVQQIGVTLELDTDGIWCCLPNTFPENFTLTTTNP 926

Query: 854  KK-KLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEFEVDGPYKAMILP 912
             K K++ISYPCV+LN  V    +N QYQ LV   +  Y+THSECSI FEVDGPY AM+LP
Sbjct: 927  SKPKISISYPCVVLNKMVHDRYSNHQYQDLVS--TGVYKTHSECSIYFEVDGPYLAMLLP 984

Query: 913  ASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFLHGSTIEECY 972
            AS+EEG  IKKRYAVFN DG+LAELKGFE+KRRGEL L+K FQ+++F +FL GST+ + Y
Sbjct: 985  ASREEGKSIKKRYAVFNPDGSLAELKGFELKRRGELMLVKDFQSQVFRRFLDGSTLADAY 1044

Query: 973  SAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLADYGE-QKSCAVTTARRLSD 1031
            ++ A VA+  LD+L++QG+     E+++ I+ESS M++ LA+Y E QKS A+TTARR+++
Sbjct: 1045 ASAAVVADAALDMLESQGEGYDTEEILEKITESSNMTRRLAEYPESQKSLAITTARRIAE 1104

Query: 1032 FLGDTMVKDKGLRCQYIVACEPQGTPVSERAVPVAIFETDAEIMKFYLRKW---CKTSSD 1088
            FLG  MVKDKGL C +I++  P G PV+ERA+PV IF  D  +   +LRKW       S+
Sbjct: 1105 FLGPQMVKDKGLACHFIISRMPTGRPVTERAIPVTIFRADPAVRTHFLRKWTADATVPSE 1164

Query: 1089 VGIRSIVDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLYKKVREKEDKFRQR 1148
            + +++++DW YY  R S+ +QKI++IPAA+Q + NPVPRV HPDWL K++R +  ++RQ 
Sbjct: 1165 LNLKTLLDWDYYTARFSACVQKIVSIPAALQSLPNPVPRVEHPDWLEKRIRHRNSRYRQV 1224

Query: 1149 KLVDIFS 1155
             L+ + S
Sbjct: 1225 SLLGMLS 1231



 Score =  121 bits (304), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 139/612 (22%), Positives = 244/612 (39%), Gaps = 87/612 (14%)

Query: 1406 LLADPEVEVLGWQQNAAKIGMQRCAASSQWFNERISLARYA------------------- 1446
            LL+DP      W +  A+   +R  AS  W  ER++L+R +                   
Sbjct: 1733 LLSDP----FRWTRLLARRLFERFFASLLWVEERLALSRVSGIPLCNIAQDSCVHVLDVL 1788

Query: 1447 ---------HILWISDDGVPDLGGTSEEDECFADEVHQPVLTYPGAYRKVSVELKIHHLS 1497
                     H+LW S D +       E             +   G Y    VE  +  L 
Sbjct: 1789 YSRALHRRHHVLWCSSDPLITFDTVEERPR---------EVCMTGGYTSWCVEFSLSRLD 1839

Query: 1498 VNALLKSNQVNEMEGGGLFGFDQDMNSGPYNNELCGFDETTSSAPAFRVVKQLIQRCLTD 1557
            V ALL               F Q +  G   N     D   S+   F +++ L+   L  
Sbjct: 1840 VVALL---------------FSQAIEEGDDPNARVLSDRGVSTH--FNILRDLVADLLGQ 1882

Query: 1558 AVTSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEFRKLGATIIF 1617
            A+   N+ AD +L ++ RWL  P S  ++P L  +L  +  +    +L    KLG   + 
Sbjct: 1883 AME--NILADTLLNNVARWLRDPASSCYEPRLVELLSSLAHRALTGILLRLAKLGGRAVK 1940

Query: 1618 ANFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLFMDQYNYGGI 1677
             + S V + T K+ L  A ++   +  +LQ + +   + L+P+ +W   + +D  +Y G+
Sbjct: 1941 VDGSSVTVLTSKYSLQEAVSFARFMTASLQDQPMLLLLSLQPLRYWCPYVVLDPCDYAGL 2000

Query: 1678 PARADE-SLDDD-----SQVDIVSSWNIAEYLPKEIQDHFVLVVSEFMYIPWKHAQKLAA 1731
                D   L D      S + +     +A  LP  ++  F   V E +Y       +L A
Sbjct: 2001 FITEDAIKLKDGEEPTRSDLHVAHQLTMASRLPSRVRSTFAKRVVETLY-------QLNA 2053

Query: 1732 SRASLQEGSSCTPSITVAAAENFESHIVQYVKGEISSYFTGKLLSIVRDAIHHM---KKM 1788
            S   +  G+    ++T+A       H+ + +  +    F G L + + D +  +   + +
Sbjct: 2054 STRHVYCGTVADHTVTLATRHE---HLTRRLLQDSQKLFEGDLQTEIMDEVQRVTDTRDL 2110

Query: 1789 NNDQHNSPGVMQTAANIHKVDAPLEFIKHVCAAFALDQNVQHDVLVMRKNLLKYVRVREF 1848
              ++ ++                LE+ K VC    L       V  +R N ++   +  F
Sbjct: 2111 YTEEEHAAHERGELTLWSSGAVALEYAKCVCRVLELIP-CNGAVGKVRNNCMRLCGISPF 2169

Query: 1849 APEAEFR-DPCPSFILPNVICSYCNDCRDLDLCRDMALLAQDWHCAMPQCGQPYDREVME 1907
            + +++F+ DP  +  L +V CS+CN    +DL      +   + C       P     ME
Sbjct: 2170 SAQSQFQADPFLAHRLQSVTCSFCNSHILIDLLVRRKSVTSPFTCTACA--APIAAASME 2227

Query: 1908 NALLQIVRQRERLYHLQDLVCIRCNQVKAAHLAEQCACAGSFRCKEDASDFRSKMQIFLN 1967
              L++ V Q  R+Y+ QD VC +C ++   ++AE+  C G+   K  A+    +++   +
Sbjct: 2228 GTLVRHVSQLLRVYNQQDFVCTKCREMTTTYVAER--CCGALVGK--AAPVEGELRAVHH 2283

Query: 1968 IANRQGFQLLQE 1979
            IA  QGF  L E
Sbjct: 2284 IAKIQGFAWLAE 2295


>gi|389603126|ref|XP_001568535.2| putative DNA polymerase epsilon catalytic subunit [Leishmania
           braziliensis MHOM/BR/75/M2904]
 gi|322505737|emb|CAM43651.2| putative DNA polymerase epsilon catalytic subunit [Leishmania
           braziliensis MHOM/BR/75/M2904]
          Length = 2305

 Score =  614 bits (1584), Expect = e-172,   Method: Compositional matrix adjust.
 Identities = 319/654 (48%), Positives = 416/654 (63%), Gaps = 32/654 (4%)

Query: 38  EGDKRLGWLLTFASSS---LEDEDT----RKVYSCIDLYFVSQDGSTFKSKYKFRPYFYA 90
           E   R+GWL  +  ++    EDED         + + L F    G TF     F PY   
Sbjct: 6   ESGTRVGWLFNYHPTTEVLQEDEDAIAGEGAQRAALVLLFQDLAGDTFCVHLHFDPYILV 65

Query: 91  ATKEKMEMDVEAYLRRRYESQI-ADIEILEKEDLDLKNHLSGLHKSYLKISFDTVQQLMD 149
              E  E +VE  L   +  QI + I  +E+EDLDL NHLSG  + YLK+ F  VQ L  
Sbjct: 66  QAVEGHEREVELGLMSTFGPQIISKIVAVEREDLDLVNHLSGKKRVYLKVVFRNVQDLTT 125

Query: 150 VKKDLLHVVE-----------RNQAKFDAAEAY------ESILTGKREQRPQDFLDCIVD 192
           ++  +  +V+           RNQ     ++A       +S+ +     R   ++D + D
Sbjct: 126 LRGQVEKIVKLNASLSSENPLRNQFSGSLSDAMAKPFVEDSLYSAAGSSR---WMDWVQD 182

Query: 193 LREYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLLEKRVD-LLQRAEVHVCAFDIETTKL 251
           +REYDV YH+R AID  V CG WYDV+++     +E+  D     A   V AFDIETTK 
Sbjct: 183 IREYDVKYHMRVAIDMKVYCGLWYDVTVTEGEARVERCDDSRYAPAMPRVIAFDIETTKA 242

Query: 252 PLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNVNNEI 311
           PL+FP  + D + MISYMLDG+GYLI+NRE V EDI   EYTPKPE+EG+F   N  NE 
Sbjct: 243 PLRFPQPEVDEVYMISYMLDGRGYLIVNREIVTEDIAPFEYTPKPEYEGFFDTFNEENEA 302

Query: 312 ELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDKNQGECRAK 371
             LR +F  M++ KP +YVTYNGDYFD+PFL  RA HHG  M +E+GF      G    +
Sbjct: 303 ATLRRFFDEMRKYKPNVYVTYNGDYFDFPFLHARALHHGMHMHKEIGF-TQMVDGAFLNQ 361

Query: 372 FACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQMMASYSV 431
              HLDCF WVKRDSYLPQGSQGLKAVTK KLGY+P+EV+PEDM+  A+ +PQ MASYSV
Sbjct: 362 QIPHLDCFYWVKRDSYLPQGSQGLKAVTKYKLGYEPIEVDPEDMLPLAQSQPQRMASYSV 421

Query: 432 SDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVICPNKH 491
           SDA++T+YLY  YVHPFIFSLATIIPM PD+VLRKGSG LCE LLMVQA   NV+ PNK 
Sbjct: 422 SDALSTWYLYQKYVHPFIFSLATIIPMPPDDVLRKGSGGLCESLLMVQAEANNVVFPNKK 481

Query: 492 QSDPEKFYRNHLLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQLLNNLDRDLQYA 551
           +   E+FY  HL+++ETYIGG VE L SGV+RSD+P +F ++P  Y+ L++++D  L++A
Sbjct: 482 EIVRERFYEGHLIDTETYIGGRVEALRSGVYRSDIPMTFDMNPDTYQSLMDDVDEALRFA 541

Query: 552 IKVEGKMDLESVSNYDEVKNAIMEKLLRLQEEPIREECPLIYHLDVAAMYPNIILTNRLQ 611
           ++VE  + +E V+N +EV+ A++ KL  L+  P ++E P IYHLDV AMYPNIILTNRLQ
Sbjct: 542 LEVENGVKVEEVTNLEEVRAAVLAKLTNLRNRPHQQEKPFIYHLDVGAMYPNIILTNRLQ 601

Query: 612 PPSIVTDEVCTACDFNRPGK--TCLRKLEWVWRGEIFMGKRSDYYHLKKQIESE 663
           P +I   +VC  C FN P     C R + W WR E+F   R ++  +K Q+E+E
Sbjct: 602 PYAIARPDVCAGCCFNSPNNEAQCKRVMSWKWRAELFTAGRYEFQRVKAQLENE 655



 Score =  513 bits (1322), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 269/517 (52%), Positives = 364/517 (70%), Gaps = 16/517 (3%)

Query: 674  KSFLDLPKMEQQSRLKDRLKKYCQKAYKRVLDKPVTELREAGI-CMRENSFYVDTVRSFR 732
            K++  L +  Q + LK RL +Y +KAY ++ +    E+ ++ + C RENSFYVDTVR FR
Sbjct: 753  KAYHKLTENTQFNMLKRRLSEYSRKAYGKIHE--TREVMQSNVVCQRENSFYVDTVRLFR 810

Query: 733  DRRYEYKGLNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHKCILNSFYGYVMRK 792
            DRRYEYK   K+WK KL  AK   ++ + +  Q   V  +SLQLAHKCILNSFYGYVMRK
Sbjct: 811  DRRYEYKAALKIWKKKLDAAK---DADERKLCQSRCVQMESLQLAHKCILNSFYGYVMRK 867

Query: 793  GARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLPGSFPENFTFKTKD 852
            G+RW SMEMAG+VTY GA +IQ AR L+++IG  LELDTDGIWC LP +FPENFTF T +
Sbjct: 868  GSRWSSMEMAGIVTYLGATLIQMARSLVQQIGVTLELDTDGIWCCLPNTFPENFTFTTTN 927

Query: 853  LKK-KLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEFEVDGPYKAMIL 911
              K +++ISYPCV+LN  V    TN QYQ L+   +  Y THSECSI FEVDGPY AM+L
Sbjct: 928  ASKPQISISYPCVVLNKMVHDRYTNHQYQNLLS--TGVYRTHSECSIYFEVDGPYLAMLL 985

Query: 912  PASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFLHGSTIEEC 971
            PAS+EEG  IKKRYAVFN DG+LAELKG  + RRGEL L+K FQ+++F +FL GST+ + 
Sbjct: 986  PASREEGKSIKKRYAVFNPDGSLAELKG--LSRRGELMLVKDFQSQVFRRFLDGSTLADA 1043

Query: 972  YSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLADYGE-QKSCAVTTARRLS 1030
            Y++ A VAN  LD+L+++G+     E+++ I+ESS M++ L++Y E QKS A+TTARR++
Sbjct: 1044 YASAAVVANAALDMLESKGEGYDTEEILEKITESSNMTRRLSEYPESQKSLAITTARRIA 1103

Query: 1031 DFLGDTMVKDKGLRCQYIVACEPQGTPVSERAVPVAIFETDAEIMKFYLRKWCKTS---S 1087
            +FLG  MVKDKGL C +I++  P G PV+ERA+PV IF  D  I   +LRKW   +   S
Sbjct: 1104 EFLGPQMVKDKGLACHFIISRMPAGRPVTERAIPVTIFRADQAIRTHFLRKWTADTTVPS 1163

Query: 1088 DVGIRSIVDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLYKKVREKEDKFRQ 1147
            ++ +++++DW YY  R S+ +QKI++IPAA+Q + NPVPRV +PDWL K++R    ++RQ
Sbjct: 1164 ELNLKALLDWDYYIARFSACVQKIVSIPAALQSLPNPVPRVAYPDWLEKRIRHSNSRYRQ 1223

Query: 1148 RKLVDIFSSLK-KDDFLNKTCNAETNLMDENVEDLED 1183
              L  + S ++ K + L    +A       NV+ +ED
Sbjct: 1224 VSLRSMLSKVQSKSEGLGGKFSAAAAATTINVDAVED 1260



 Score =  105 bits (261), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 137/619 (22%), Positives = 244/619 (39%), Gaps = 100/619 (16%)

Query: 1406 LLADPEVEVLGWQQNAAKIGMQRCAASSQWFNERISLARYA------------------- 1446
            LL+DP      W +  A+   +R  AS  W  ER++L+R +                   
Sbjct: 1733 LLSDP----FRWTRLLARRLFERFFASLLWVEERLALSRISGIPLCNIAQDSCVHVLDVL 1788

Query: 1447 ---------HILWISDDGVPDLGGTSEE--DECFADEVHQPVLTYPGAYRKVSVELKIHH 1495
                     H+LW S D +       E   + C A           G Y    VE  +  
Sbjct: 1789 YIRALHRRNHVLWCSSDPLITFDTVEERPREVCMA-----------GGYASWCVEFGLSR 1837

Query: 1496 LSVNALLKSNQVNEMEGGGLFGFDQDMNSGPYNNELCGFDETTSSAPAFRVVKQLIQRCL 1555
            L V ALL               F Q +  G   N     D   S+   F +++ L+   L
Sbjct: 1838 LDVVALL---------------FSQTIEEGDDQNARVLSDRGVSTH--FNILRDLVADVL 1880

Query: 1556 TDAVTSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEFRKLGATI 1615
              AV   N+ AD +L ++ RWL  P S  ++P L  +L  +  +    +L    KLG   
Sbjct: 1881 GQAVD--NILADTLLNNVARWLRDPLSSCYEPRLVELLSSLAHRALTGILLRLAKLGGRT 1938

Query: 1616 IFANFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLFMDQYNYG 1675
            +  + S V + T K+ L  A ++   L  +LQ + +   + L+P+ +W   + +D  +Y 
Sbjct: 1939 VKVDGSSVTVLTSKYSLQEAVSFASFLTASLQDQPMLLLLSLQPLRYWCPYIVLDPRDYA 1998

Query: 1676 GIPARADESL-----DDDSQVD--IVSSWNIAEYLPKEIQDHFVLVVSEFMYIPWKHAQK 1728
            G+   A++++     ++ ++ D  +     +A  LP  +++  V  V   +Y       +
Sbjct: 1999 GLFIFAEDAIKFMKGEEPTRADLHVAHQLTMASRLPNRVRNTLVARVVGTLY-------Q 2051

Query: 1729 LAASRASLQEGSSCTPSITVAAAENFESHIVQYVKGEISSYFTGKLLSIVRDAIHHM--- 1785
            L      +   +    ++T+A   N    + + V  +    F   + + + D +  M   
Sbjct: 2052 LNEIVHRVYCHTVADHTVTLATRHN---QLTRRVLEDSQRLFEDVMQADIMDEVQRMTDA 2108

Query: 1786 KKMNNDQHNSPGVMQTAANIHKVDAPLEFIKHVCAAFALDQNVQHDVLVMRKNLLKYVRV 1845
            + +  ++ ++                LE+ K VC    L       V  +R N ++   +
Sbjct: 2109 RDLYTEEEHTAHERGELTLWSSGAVGLEYAKCVCRVLELIP-CNGAVGKVRNNAMRLCGI 2167

Query: 1846 REFAPEAEFR-DPCPSFILPNVICSYCNDCRDLDLCRDMALLAQDWHCAMP----QCGQP 1900
              F+ +++F+ DP  +  L  V CS+CN    +D      LL +    A P     C  P
Sbjct: 2168 SPFSAQSQFQTDPFLAHRLQPVTCSFCNSHISID------LLVRRKSAASPFTCPACAAP 2221

Query: 1901 YDREVMENALLQIVRQRERLYHLQDLVCIRCNQVKAAHLAEQCACAGSFRCKEDASDFRS 1960
                 ME  L++ V Q  R+Y  QD VC +C ++   ++ E+  C G+   K  A+    
Sbjct: 2222 IAAVAMEGTLVRRVSQLLRVYTQQDFVCTKCREMITTYVGER--CCGALVGK--AAPVEG 2277

Query: 1961 KMQIFLNIANRQGFQLLQE 1979
            +++    +A  Q F  L E
Sbjct: 2278 ELRALQYLAKIQSFSWLAE 2296


>gi|401429902|ref|XP_003879433.1| DNA polymerase epsilon catalytic subunit,putative [Leishmania
           mexicana MHOM/GT/2001/U1103]
 gi|322495683|emb|CBZ30989.1| DNA polymerase epsilon catalytic subunit,putative [Leishmania
           mexicana MHOM/GT/2001/U1103]
          Length = 2304

 Score =  613 bits (1580), Expect = e-172,   Method: Compositional matrix adjust.
 Identities = 316/652 (48%), Positives = 412/652 (63%), Gaps = 28/652 (4%)

Query: 38  EGDKRLGWLLTFASSS---LEDEDT----RKVYSCIDLYFVSQDGSTFKSKYKFRPYFYA 90
           E   ++GWL  +  ++    E+ED         + + L F    G TF     + PY   
Sbjct: 6   ESGTKVGWLFNYHPTTEVLQEEEDAVAGEGAQRAALVLLFQDLAGDTFYVHLHYDPYILV 65

Query: 91  ATKEKMEMDVEAYLRRRYESQI-ADIEILEKEDLDLKNHLSGLHKSYLKISFDTVQQLMD 149
              E  E +VE  L   +  QI ++I  +EKEDLDL NHLSG  + YLK+ F  VQ L  
Sbjct: 66  QAVEGHEREVELGLMSTFGPQIISEIIAVEKEDLDLVNHLSGKKRVYLKVVFRNVQDLTT 125

Query: 150 VKKDLLHVVERNQAKFDAAEAYESILTGK---------------REQRPQDFLDCIVDLR 194
           V+  L   V+ N A   +     S  +G                       ++D + D+R
Sbjct: 126 VRGRLEKTVKLN-ASLGSENPLRSQFSGSLGDAMAKTFAEDPLYSAAGSSRWMDWVQDIR 184

Query: 195 EYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLLEKRVD-LLQRAEVHVCAFDIETTKLPL 253
           EYDV Y++R AID  V CG WYDV+++  G  +++  D     A   V AFDIETTK PL
Sbjct: 185 EYDVKYYMRVAIDMKVYCGLWYDVTVTERGARVQRCDDSRYAPAMPRVIAFDIETTKAPL 244

Query: 254 KFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNVNNEIEL 313
           +FP  + D + MISYMLDG+GYLIINRE V EDI   EYTPKPE+EG+F   N  NE   
Sbjct: 245 RFPQPEVDEVYMISYMLDGRGYLIINREIVTEDIAPFEYTPKPEYEGFFDTFNEENEAAT 304

Query: 314 LRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDKNQGECRAKFA 373
           LR +F  M++ KP +YVTYNGDYFD+PF+  RA +HG  M  E+GF      G    K  
Sbjct: 305 LRRFFDEMRKYKPNVYVTYNGDYFDFPFIHARALYHGMNMRNEIGF-TQTADGAFLNKQI 363

Query: 374 CHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQMMASYSVSD 433
            HLDCF WVKRDSYLPQGSQGLKAVTK KLGY+P+EV+PEDM+  A+ +PQ MASYSVSD
Sbjct: 364 PHLDCFYWVKRDSYLPQGSQGLKAVTKYKLGYEPIEVDPEDMLPLAQSQPQRMASYSVSD 423

Query: 434 AVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVICPNKHQS 493
           AV+T+YLY  YVHPFIFSLATIIPM PD+VLRKGSG LCE LLMVQA   NV+ PNK ++
Sbjct: 424 AVSTWYLYQKYVHPFIFSLATIIPMPPDDVLRKGSGGLCESLLMVQAEANNVVFPNKKEA 483

Query: 494 DPEKFYRNHLLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQLLNNLDRDLQYAIK 553
           + E+FY  HL+++ETYIGG VE L SGV+RSD+P +F ++P  Y+ L++++D  L++ ++
Sbjct: 484 ERERFYEGHLIDTETYIGGRVEALRSGVYRSDIPMTFDMNPDTYQSLMDDVDEALRFTLE 543

Query: 554 VEGKMDLESVSNYDEVKNAIMEKLLRLQEEPIREECPLIYHLDVAAMYPNIILTNRLQPP 613
           VE  + +E V+N  EV+ A++ KL  L++ P ++E P IYHLDV AMYPNIILTNRLQP 
Sbjct: 544 VENGVKVEEVTNLKEVRAAVLAKLTNLRDRPHQQEKPFIYHLDVGAMYPNIILTNRLQPY 603

Query: 614 SIVTDEVCTACDFNRPGK--TCLRKLEWVWRGEIFMGKRSDYYHLKKQIESE 663
           +I   +VC  C FN P     C R + W WR E+F   R ++  +K Q+E+E
Sbjct: 604 AIARPDVCAGCCFNSPNNEAQCKRVMSWKWRAELFTAGRYEFQRVKAQLENE 655



 Score =  525 bits (1351), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 264/490 (53%), Positives = 357/490 (72%), Gaps = 11/490 (2%)

Query: 674  KSFLDLPKMEQQSRLKDRLKKYCQKAYKRVLDKPVTELREAGICMRENSFYVDTVRSFRD 733
            K++  L +  Q + LK RL +Y +KAY ++ +     +R   +C RENSFYVDTVR FRD
Sbjct: 750  KAYHKLNENTQFNMLKRRLSEYSRKAYGKIHETREV-MRSNVVCQRENSFYVDTVRLFRD 808

Query: 734  RRYEYKGLNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHKCILNSFYGYVMRKG 793
            RRYEYK   K WK +L  AK   +S + +  Q   V  +SLQLAHKCILNSFYGYVMRKG
Sbjct: 809  RRYEYKAALKTWKKRLDAAK---DSDERKVCQSRCVQMESLQLAHKCILNSFYGYVMRKG 865

Query: 794  ARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLPGSFPENFTFKTKDL 853
            +RW SMEMAG+VTY GA +IQ AR L+++IG  LELDTDGIWC LP +FPENFTF T + 
Sbjct: 866  SRWSSMEMAGIVTYLGATLIQMARSLVQQIGVTLELDTDGIWCCLPNTFPENFTFTTTNP 925

Query: 854  KK-KLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEFEVDGPYKAMILP 912
             K K++ISYPCV+LN  V    +N QYQ LV   +  Y+TH+ECSI FEVDGPY AM+LP
Sbjct: 926  SKPKISISYPCVVLNKMVHDRYSNHQYQDLVS--TGVYKTHNECSIYFEVDGPYLAMLLP 983

Query: 913  ASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFLHGSTIEECY 972
            AS+EEG  IKKRYAVFN DG+LAELKGFE+KRRGEL L+K FQ+++F +FL GST+ + Y
Sbjct: 984  ASREEGKSIKKRYAVFNPDGSLAELKGFELKRRGELMLVKDFQSQVFRRFLDGSTLADAY 1043

Query: 973  SAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLADYGE-QKSCAVTTARRLSD 1031
            ++ A VA+  LD+L+++G+     E+++ I+ESS M++ L++Y E QKS A+TTARR+++
Sbjct: 1044 ASAAVVADAALDMLESKGEGYDTEEILEKIAESSNMTRRLSEYPESQKSLAITTARRIAE 1103

Query: 1032 FLGDTMVKDKGLRCQYIVACEPQGTPVSERAVPVAIFETDAEIMKFYLRKWCKTS---SD 1088
            FLG  MVKDKGL C +I++  P G PV+ERA+PV IF  D  +   +LRKW   +   S+
Sbjct: 1104 FLGPQMVKDKGLACHFIISRMPAGRPVTERAIPVTIFRADPAVRTHFLRKWTADTSVPSE 1163

Query: 1089 VGIRSIVDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLYKKVREKEDKFRQR 1148
            + +++++DW YY  R S+ +QKI++IPAA+Q + NPVPRVVHP+WL K++R +  ++RQ 
Sbjct: 1164 LNLKTLLDWDYYTARFSACVQKIVSIPAALQSLPNPVPRVVHPEWLEKRIRHRNSRYRQV 1223

Query: 1149 KLVDIFSSLK 1158
             L+ + S ++
Sbjct: 1224 SLLGMLSKVQ 1233



 Score =  131 bits (329), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 137/622 (22%), Positives = 247/622 (39%), Gaps = 107/622 (17%)

Query: 1406 LLADPEVEVLGWQQNAAKIGMQRCAASSQWFNERISLAR--------------------- 1444
            LL+DP      W +  A+   +R  AS  W  ER++L+R                     
Sbjct: 1733 LLSDP----FRWTRLLARRLFERFFASLLWVEERLALSRVSGIPLCNIAQDSCVHVLDVL 1788

Query: 1445 -------YAHILWISDDGVPDLGGTSEE--DECFADEVHQPVLTYPGAYRKVSVELKIHH 1495
                   + H+LW S D +       E   + C A           G Y    VE  +  
Sbjct: 1789 YSRALHRHNHVLWCSSDPLITFDTVEERPREVCMA-----------GGYTSWCVEFGLSR 1837

Query: 1496 LSVNALLKSNQVNEMEGGGLFGFDQDMNSGPYNNELCGFDETTSSAPAFRVVKQLIQRCL 1555
            L V ALL               F Q +  G   N     D   S+   F +++ L+   L
Sbjct: 1838 LDVVALL---------------FSQAIEEGDDPNARVLSDRGVSTH--FNILRDLVADLL 1880

Query: 1556 TDAVTSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEFRKLGATI 1615
              A+   N+  D +L ++ RWL  P S  ++P L  +L  +  +    +L    KLG   
Sbjct: 1881 GQAME--NILVDTLLNNVARWLRDPASSCYEPRLVELLSSLAHRALTGILLRLAKLGGRA 1938

Query: 1616 IFANFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLFMDQYNYG 1675
            +  + S V + T K+ L  A ++   +  +LQ + +   + L P+ +W   + +D  +Y 
Sbjct: 1939 VKVDGSSVTVLTSKYSLQEAVSFARFMTASLQDQPMLVLLSLHPLRYWCPYVVLDPCDYA 1998

Query: 1676 GI--------------PARADESLDDDSQVDIVSSWNIAEYLPKEIQDHFVLVVSEFMYI 1721
            G+              P R+D        + +     +A  LP  +++ F+  V E +Y 
Sbjct: 1999 GLFITEDAIKFKEAEGPTRSD--------LHVAHQLTMASRLPSRVRNTFLERVVETLY- 2049

Query: 1722 PWKHAQKLAASRASLQEGSSCTPSITVAAAENFESHIVQYVKGEISSYFTGKLLSIVRDA 1781
                  +L AS   +   +    ++T+A   +   H+ + +  +   +F G L + + D 
Sbjct: 2050 ------RLNASAHRVYCDTVVDHTVTLATRHD---HLTRRLLQDSQKFFEGVLQTDIMDE 2100

Query: 1782 IHHM---KKMNNDQHNSPGVMQTAANIHKVDAPLEFIKHVCAAFALDQNVQHDVLVMRKN 1838
            +  +   + +  ++ ++                LE+ K VC    L       V  +R N
Sbjct: 2101 VQRVTDTRDLYTEEEHAAHERGELTLWSSGAVALEYAKCVCRVLELIP-CNGAVGKVRNN 2159

Query: 1839 LLKYVRVREFAPEAEFR-DPCPSFILPNVICSYCNDCRDLDLCRDMALLAQDWHCAMPQC 1897
             ++   +  F+ +++F+ DP  +  L +V CS+CN    +DL      +   + C     
Sbjct: 2160 CMRLCGISPFSAQSQFQADPFLAHRLQSVTCSFCNSNISIDLLVRRKSVTSPFTCTACA- 2218

Query: 1898 GQPYDREVMENALLQIVRQRERLYHLQDLVCIRCNQVKAAHLAEQCACAGSFRCKEDASD 1957
              P     ME  L++ V Q  R+Y+ QD VC +C ++   ++AE+  C G+   K  A+ 
Sbjct: 2219 -APIAAASMEGTLVRHVSQLLRVYNQQDFVCTKCREMATTYVAER--CCGALVSK--AAP 2273

Query: 1958 FRSKMQIFLNIANRQGFQLLQE 1979
               +++   ++A  QGF  L E
Sbjct: 2274 VEGELRALHHLAKIQGFAWLAE 2295


>gi|407408319|gb|EKF31808.1| DNA polymerase epsilon catalytic subunit, putative [Trypanosoma
           cruzi marinkellei]
          Length = 2237

 Score =  607 bits (1564), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 321/654 (49%), Positives = 407/654 (62%), Gaps = 31/654 (4%)

Query: 38  EGDKRLGWLLTFA--------SSSLEDEDTRKVYSCIDLYFVSQDGSTFKSKYKFRPYFY 89
           E   R GWL  +          SS E +      + + L     DG  F     +RPY +
Sbjct: 12  ESGSRTGWLFNYHPTTVMLPDESSAERQGGSGGRAALVLLLQDHDGEIFSVNLFYRPYIF 71

Query: 90  AATKEKMEMDVEAYLRRRYESQ-IADIEILEKEDLDLKNHLSGLHKSYLKISFDTVQQLM 148
            +  E  E +VE  L   +  Q I  +E +EKEDLDL NHLSG  + YLK+ F  VQ L 
Sbjct: 72  VSVVEGHEHEVELGLMSLFGPQLIYHVETVEKEDLDLVNHLSGRRRLYLKVVFRNVQDLT 131

Query: 149 DVKKDLLHVVERNQAKFDAAE--------AYESILTGKREQRPQD-------FLDCIVDL 193
            V+  L   V+RN A   A          +   ++    E  P D       ++D + ++
Sbjct: 132 VVRGRLEKFVKRN-ASMGATNPLLNPFEGSLRDVMAKTFEDDPFDTNVSSERWVDWVQEM 190

Query: 194 REYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLLEKRVD--LLQRAEVHVCAFDIETTKL 251
           REYDV YH+R AID  +  G WYDV +   G     R D      A   VCAFDIETTK 
Sbjct: 191 REYDVKYHMRVAIDLGIFVGVWYDVLVHE-GETKVTRCDDSAYAPAMPRVCAFDIETTKA 249

Query: 252 PLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNVNNEI 311
           PLKFP  + D I MISYMLDG+GYLI+NR+ V  DI   EYTP+PE+EG F+  N  NE 
Sbjct: 250 PLKFPQPEVDQIYMISYMLDGRGYLIVNRDIVSMDIHPFEYTPRPEYEGVFETFNEPNEK 309

Query: 312 ELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDKNQGECRAK 371
            LLR ++  M++ KP +YVTYNGDYFD+PF+  R+  H   M EE+GF    +      K
Sbjct: 310 ALLRRFYDEMRKYKPNVYVTYNGDYFDFPFIHARSLFHQLSMREEIGFTQGADGAFLNHK 369

Query: 372 FACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQMMASYSV 431
              HLDCF WVKRDSYLPQGSQGLKAVTK KLGYDP+EVNPE+M+  A+  PQ MASYSV
Sbjct: 370 IP-HLDCFYWVKRDSYLPQGSQGLKAVTKHKLGYDPIEVNPEEMLPLAQTNPQQMASYSV 428

Query: 432 SDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVICPNKH 491
           SDAV+T+YLY  YVHPFI+SL+TIIPMSPD+VLRKGSG LCE LLMVQAY  NVI PNK 
Sbjct: 429 SDAVSTWYLYQKYVHPFIYSLSTIIPMSPDDVLRKGSGGLCESLLMVQAYANNVIFPNKK 488

Query: 492 QSDPEKFYRNHLLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQLLNNLDRDLQYA 551
           +   EKF+  HL++SETYIGG VE L SGVFRSD+P  F ++P  Y++L+++LD  L++A
Sbjct: 489 EQQLEKFFNGHLIDSETYIGGRVEALRSGVFRSDIPLGFNMNPDMYQKLIDDLDDALRFA 548

Query: 552 IKVEGKMDLESVSNYDEVKNAIMEKLLRLQEEPIREECPLIYHLDVAAMYPNIILTNRLQ 611
           ++VE  + +  V+NY+EV+ A+  KL  L++ P +   P+IYHLDV AMYPNIILTNRLQ
Sbjct: 549 LEVENGVQVNDVTNYEEVQMAMKAKLEFLRDHPRQSSEPIIYHLDVGAMYPNIILTNRLQ 608

Query: 612 PPSIVTDEVCTACDFNRPGK--TCLRKLEWVWRGEIFMGKRSDYYHLKKQIESE 663
           P +I   +VC  C FN P     C R + W W+GE     R +Y  +K Q+E+E
Sbjct: 609 PYAIPKPDVCAGCCFNSPNNEHQCKRTMTWKWKGEFLTASRHEYQRVKAQLENE 662



 Score =  524 bits (1349), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 269/493 (54%), Positives = 354/493 (71%), Gaps = 11/493 (2%)

Query: 674  KSFLDLPKMEQQSRLKDRLKKYCQKAYKRVLDKPVTELREAGICMRENSFYVDTVRSFRD 733
            K+F  L    Q + LK RL +Y +KAY ++ +     LR   +C RENSFYVDTVR FRD
Sbjct: 756  KAFHKLQDTTQFNLLKKRLAEYSRKAYGKIHESREI-LRTDVVCQRENSFYVDTVRLFRD 814

Query: 734  RRYEYKGLNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHKCILNSFYGYVMRKG 793
            RRYEYK   K WK +L  AK      +++  +   V  +SLQLAHKCILNSFYGYVMRKG
Sbjct: 815  RRYEYKAALKTWKKRLDAAKEVE---EVKLCKSRCVQMESLQLAHKCILNSFYGYVMRKG 871

Query: 794  ARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLPGSFPENFTFKTKDL 853
            +RWYSMEMAG+VTY GA +IQ AR L+++IG  LELDTDGIWC LP  FPENF F T + 
Sbjct: 872  SRWYSMEMAGIVTYLGATLIQMARALVQQIGVTLELDTDGIWCCLPKEFPENFIFTTSNP 931

Query: 854  KK-KLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEFEVDGPYKAMILP 912
             K K+TISYPCV+LN  V  + TN QYQT + P    YE  SECSI FEVDGPY AM+LP
Sbjct: 932  SKPKVTISYPCVVLNKMVHDDYTNHQYQTCIAP--GVYEQRSECSIYFEVDGPYLAMLLP 989

Query: 913  ASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFLHGSTIEECY 972
            AS+EEG  IKKRYAVFN DG LAELKGFE+KRRGEL LIK FQ+++F +FL G+++ + Y
Sbjct: 990  ASREEGKSIKKRYAVFNPDGGLAELKGFELKRRGELMLIKDFQSQVFRRFLDGNSLVDSY 1049

Query: 973  SAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLADYGE-QKSCAVTTARRLSD 1031
            ++ A VAN  LD+L ++G+     E+++ +SESS M++ LA+Y + QKS A+TTARR+++
Sbjct: 1050 ASAAVVANAALDMLYSKGEGYETEEILEKLSESSNMTRRLAEYPDSQKSLALTTARRIAE 1109

Query: 1032 FLGDTMVKDKGLRCQYIVACEPQGTPVSERAVPVAIFETDAEIMKFYLRKWCKTSS---D 1088
            FLG  MVKDKGL CQ++++  P G PV+ER +P+ IF  D  +   +LRKW   +S   +
Sbjct: 1110 FLGPQMVKDKGLACQFVISRLPAGRPVTERPIPLTIFRADPTLRVHFLRKWTGDNSLSLE 1169

Query: 1089 VGIRSIVDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLYKKVREKEDKFRQR 1148
            V +R ++DW YY  R ++ +QKIITIPAA+QKV NPVPRV +P+WL+K+V+++  +FRQ 
Sbjct: 1170 VDLRQLLDWDYYIARFNACVQKIITIPAALQKVPNPVPRVPYPEWLHKRVQQQNSRFRQV 1229

Query: 1149 KLVDIFSSLKKDD 1161
             L  +F+ +K ++
Sbjct: 1230 SLTGMFAKMKANE 1242



 Score =  127 bits (320), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 158/703 (22%), Positives = 275/703 (39%), Gaps = 113/703 (16%)

Query: 1324 IQLVPSSQSGVFLAWVVVEGIMVRIPIT--VPRLFYLNSKDPIVEKFPGRRVNKTLPHGR 1381
            ++ +    S +  AW ++  +++ +  +   P    L S  P     P     + LPH  
Sbjct: 1604 LEFMTEVASDITSAWKIIYRVLMEVMESGRSPLFAVLESGVPT----PQLLTQRCLPHSL 1659

Query: 1382 RSFNLIEVMIDEDQFRKESKKLAALLADPEVEVLGWQQNAAKIGMQRCAASSQWFNERIS 1441
                ++  + DE            LLADP      W +  AK  +QR  AS  W  ERI+
Sbjct: 1660 PYLRVLGAVEDE-----------RLLADP----FRWTRLLAKRLLQRYFASLLWIEERIA 1704

Query: 1442 LARYA----------------------------HILWISDDGVPDLGGTSEEDECFADEV 1473
             +R +                            H+LW S D        S   E   +  
Sbjct: 1705 FSRLSGIPLCNLAQDTCAHVWDVMFSRSLHSRSHVLWNSHD-------ISIAYEAVEERS 1757

Query: 1474 HQPVLTYPGAYRKVSVELKIHHLSVNALLKSNQVNEMEGGGLFGFDQDMNSGPYNNELCG 1533
             Q V+  PG Y    VE  +  L V A+L S  + E               GP  + LC 
Sbjct: 1758 RQVVM--PGGYFSWCVEFSLARLDVVAVLFSQIIQE-------------EDGPNVHILCD 1802

Query: 1534 FDETTSSAPAFRVVKQLIQRCLTDAVTSGNVFADAILQHLYRWLCSPHSKLHDPVLHRIL 1593
               TT     F +++ L+   L   V   N  ADA+L    RW+  P S  ++P L  ++
Sbjct: 1803 RGVTTH----FNILRDLVSDLLGQVV--ANPVADALLASFARWIRDPVSCCYEPRLLELV 1856

Query: 1594 HKVMQKVFAMLLAEFRKLGATIIFANFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFE 1653
             K+  +    +L    KLG   +  +   +++ T K  +  A  +   ++ +LQ + +  
Sbjct: 1857 SKLAHRALTSVLIRLAKLGGRTVKVDGDSIVVLTPKHTVQDAVNFARYMVDSLQDQPMLL 1916

Query: 1654 WIELEPVHFWHSLLFMDQYNYGGIPARADESLD-------DDSQVDIVSSWNIAEYLPKE 1706
             + L+P+ +W   + +D+ ++  +   ++++L           ++ + +++ I   LPK+
Sbjct: 1917 LLSLQPIRYWCPFMVLDKRDFACLCLSSEDALGLKEREQMPPERLRVENAFTIWGRLPKK 1976

Query: 1707 IQDHFVLVVSEFMYIPWKHAQKLAASRASLQEGSSCTPSITVAA-AENFESHIVQYVKGE 1765
            +++ F   V   + +       +A  R  + +     P++ +A  +E      V+  K  
Sbjct: 1977 VKNIFFRRVESTLRL-------IAEIREKVFQEIQADPTVVLATKSEQILLRQVKAFKAA 2029

Query: 1766 ISSYFTGKLLSIVRDAIHHMKKMNNDQHNSPGVMQTAANIHKVDAPLEFIKHVCAAFALD 1825
            I +   G+L+    D +H + +   D +    V      +  V   LE+ K +C    L 
Sbjct: 2030 IENKLHGELI----DEVHGLME-RKDLYEEGEVPSGETPLSGVAVALEYTKTICRLLDLF 2084

Query: 1826 QNVQHDVLV--MRKNLLKYVRVREFAPEAEF-RDPCPSFILPNVICSYCNDCRDLDLCRD 1882
             N   D +V  MR N L+   V  F+P A+   D      L  V CS+CN    LDL   
Sbjct: 2085 HN---DGVVGKMRNNCLRLCGVSPFSPLAQLIPDVEAECRLLMVRCSFCNHDLFLDLGVQ 2141

Query: 1883 MALLAQDWHCAMPQCGQPYDREVMENALLQIVRQRERLYHLQDLVCIRCNQVKAAHLAEQ 1942
               L  DW      C  P     +E+ L++ V      +  QD  C +CN+V ++ +++ 
Sbjct: 2142 EKRLRCDW------CHAPISTSALESHLVRRVNDLVMNHLQQDFKCSKCNEVASSFMSQS 2195

Query: 1943 CACAGSFRCKEDASDFRSKMQIFLNIANRQGFQLLQECTSWIL 1985
            C      + K  A    S++Q     A  Q F  L+E     L
Sbjct: 2196 CCGPLVGKGKPIA----SQLQALRKFALIQEFPWLKESVDLAL 2234


>gi|71661155|ref|XP_817603.1| DNA polymerase epsilon catalytic subunit [Trypanosoma cruzi strain
           CL Brener]
 gi|70882804|gb|EAN95752.1| DNA polymerase epsilon catalytic subunit, putative [Trypanosoma
           cruzi]
          Length = 2237

 Score =  606 bits (1563), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 321/654 (49%), Positives = 408/654 (62%), Gaps = 31/654 (4%)

Query: 38  EGDKRLGWLLTFA--------SSSLEDEDTRKVYSCIDLYFVSQDGSTFKSKYKFRPYFY 89
           E   R GWL  +          SS+E +      + + L     DG  F     +RPY +
Sbjct: 12  ESGSRTGWLFNYHPTTVMVADESSVERQGGSGGRAALVLLLQDHDGEIFFVNLFYRPYIF 71

Query: 90  AATKEKMEMDVEAYLRRRYESQ-IADIEILEKEDLDLKNHLSGLHKSYLKISFDTVQQLM 148
            +  E  E +VE  L   +  Q I ++E +EKEDLDL NHLSG  + YLK+ F  VQ L 
Sbjct: 72  VSVVEGHEHEVELGLMSLFGPQLIYNVETVEKEDLDLVNHLSGRRRLYLKVVFRNVQDLT 131

Query: 149 DVKKDLLHVVERNQAKFDAAE--------AYESILTGKREQRPQD-------FLDCIVDL 193
            V+  L   V+RN A   A          +   ++    E  P D       ++D + ++
Sbjct: 132 VVRGRLEKFVKRN-ASMGATNPLLNPFEGSLRDVMAKTFEDDPFDSNISSERWVDWVQEM 190

Query: 194 REYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLLEKRVD--LLQRAEVHVCAFDIETTKL 251
           REYDV YH+R AID  +  G WYDV I   G     R D      A   VCAFDIETTK 
Sbjct: 191 REYDVKYHMRVAIDLGIFVGVWYDV-IVHEGEAKVTRCDDSAYAPAMPRVCAFDIETTKA 249

Query: 252 PLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNVNNEI 311
           PLKFP  + D I MISYMLDG+GYLI+NR+ V  DI   EYTP+PE+EG F+  N  NE 
Sbjct: 250 PLKFPQPEVDQIYMISYMLDGRGYLIVNRDIVSMDIHPFEYTPRPEYEGIFETFNEPNEK 309

Query: 312 ELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDKNQGECRAK 371
            LLR ++  M++ KP +YVTYNGDYFD+PF+  R+  H   M EE+GF           K
Sbjct: 310 ALLRRFYDEMRKYKPNVYVTYNGDYFDFPFIHARSLFHQLSMREEIGFTQGAEGAFLNHK 369

Query: 372 FACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQMMASYSV 431
              HLDCF WVKRDSYLPQGSQGLKAVTK KLGYDP+EVNPE+M+  A+  PQ MASYSV
Sbjct: 370 IP-HLDCFYWVKRDSYLPQGSQGLKAVTKHKLGYDPIEVNPEEMLPLAQTNPQQMASYSV 428

Query: 432 SDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVICPNKH 491
           SDAV+T+YLY  YVHPFI+SL+TIIPM+PD+VLRKGSG LCE LLMVQAY  NVI PNK 
Sbjct: 429 SDAVSTWYLYQKYVHPFIYSLSTIIPMAPDDVLRKGSGGLCESLLMVQAYANNVIFPNKK 488

Query: 492 QSDPEKFYRNHLLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQLLNNLDRDLQYA 551
           +   EKF+  HL++SETYIGG VE L SGVFRSD+P  F ++P  Y++L+++LD  L++A
Sbjct: 489 EQQLEKFFNGHLIDSETYIGGRVEALRSGVFRSDIPLGFNMNPDMYQKLIDDLDDALRFA 548

Query: 552 IKVEGKMDLESVSNYDEVKNAIMEKLLRLQEEPIREECPLIYHLDVAAMYPNIILTNRLQ 611
           ++VE  + +  V+NY+EV+ A+  KL  L++ P +   P+IYHLDV AMYPNIILTNRLQ
Sbjct: 549 LEVENDVKVNDVTNYEEVQMAMKAKLEFLRDHPRQSSEPIIYHLDVGAMYPNIILTNRLQ 608

Query: 612 PPSIVTDEVCTACDFNRPGK--TCLRKLEWVWRGEIFMGKRSDYYHLKKQIESE 663
           P +I   +VC  C FN P     C R + W W+GE     R +Y  +K Q+E+E
Sbjct: 609 PYAIPKPDVCAGCCFNSPNNEHQCKRTMTWKWKGEFLTASRHEYQRVKAQLENE 662



 Score =  525 bits (1353), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 333/775 (42%), Positives = 459/775 (59%), Gaps = 71/775 (9%)

Query: 674  KSFLDLPKMEQQSRLKDRLKKYCQKAYKRVLDKPVTELREAGICMRENSFYVDTVRSFRD 733
            K+F  L    Q + LK RL +Y +KAY ++ +     LR   +C RENSFYVDTVR FRD
Sbjct: 756  KAFHKLQDTTQFNLLKRRLAEYSRKAYGKIHESREI-LRTDVVCQRENSFYVDTVRLFRD 814

Query: 734  RRYEYKGLNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHKCILNSFYGYVMRKG 793
            RRYEYK   K WK +L  AK      +++  +   V  +SLQLAHKCILNSFYGYVMRKG
Sbjct: 815  RRYEYKAALKKWKKRLDAAKEVE---EVKLCKSRCVQMESLQLAHKCILNSFYGYVMRKG 871

Query: 794  ARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLPGSFPENFTFKTKD- 852
            +RWYSMEMAG+VTY GA++IQ AR L+++IG  LELDTDGIWC LP  FPENF F T   
Sbjct: 872  SRWYSMEMAGIVTYLGARLIQMARALVQQIGVALELDTDGIWCCLPKEFPENFIFTTSHP 931

Query: 853  LKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEFEVDGPYKAMILP 912
            LK K+TISYPCV+LN  V  + TN QYQT + P    YE  SECSI FEVDGPY AM+LP
Sbjct: 932  LKSKVTISYPCVVLNKMVHDDYTNHQYQTCIAP--GVYEKRSECSIYFEVDGPYLAMLLP 989

Query: 913  ASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFLHGSTIEECY 972
            AS+EEG  IKKRYAVFN DG LAELKGFE+KRRGEL LIK FQ+++F +FL G+++ + Y
Sbjct: 990  ASREEGKSIKKRYAVFNPDGGLAELKGFELKRRGELMLIKDFQSQVFCRFLDGNSLVDSY 1049

Query: 973  SAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLADYGE-QKSCAVTTARRLSD 1031
            ++ A VAN  LD+L ++G+     E+++ +SESS M++ LA+Y + QKS A+TTARR+++
Sbjct: 1050 ASAAVVANAALDMLYSKGEGYETEEILEKLSESSNMTRRLAEYPDSQKSLALTTARRIAE 1109

Query: 1032 FLGDTMVKDKGLRCQYIVACEPQGTPVSERAVPVAIFETDAEIMKFYLRKWCKTSS---D 1088
            FLG  MVKDKGL CQ++++  P G PV+ER +P+ IF  D  +   +LRKW   +S   D
Sbjct: 1110 FLGPQMVKDKGLACQFVISRLPAGRPVTERPIPLTIFRADPTLRLHFLRKWTGDNSLSLD 1169

Query: 1089 VGIRSIVDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLYKKVREKEDKFRQR 1148
            V +R ++DW YY  R ++ +QKIITIPAA+QKV NPVPRV +P+WL+K+++++  +FRQ 
Sbjct: 1170 VDLRQLLDWDYYIARFNACVQKIITIPAALQKVPNPVPRVPYPEWLHKRLQQQNSRFRQV 1229

Query: 1149 KLVDIFSSLKKDDFLNKTCNAETNLMDENVEDLEDFPK---------KRRNS-VNGPRPI 1198
             L  + + +K +         E+ + D  VE+L    K          RRN+  NG +  
Sbjct: 1230 SLTGMLAKMKAN---------ESAIPD--VEELIPLNKAGVPCTVTLARRNTKKNGVKE- 1277

Query: 1199 VRCFEVN-NEQKTVKTTDQVDSLRQ--------QLEPSEVSDQQPSSQNAIDTENIDRIV 1249
               FE +  E       D VD +RQ         ++  +     P S  A+DT       
Sbjct: 1278 -EDFESDCGEDLESVFDDDVDRIRQEEEAREEEAVDALKAKYFSPKSTVALDTAFFT-AS 1335

Query: 1250 DYKGWLELKKRKWKDNLDRRKKQKLGSLRASHQANGVSESLGDMINHKEAQRRTGVGSYF 1309
              K WL+ ++  W                 +H+A    E L D  N       T V ++F
Sbjct: 1336 GLKTWLQRQRDAW-----------------THRAKLRREMLLDA-NDTLLVDGTAVSNHF 1377

Query: 1310 RRQETAMTRCHWQIIQLVP-SSQSGVFLAWVVVEGIMVRIPITVPRLFYLNSKDPIVEKF 1368
               ++      W I+++     ++G+      +E  +      VPR   +++   +  + 
Sbjct: 1378 IDIKSKALTATWHILEVRSDKEETGMVTVIAALEKTLHTFRCVVPRRVIVDAT--LQFQA 1435

Query: 1369 PGRR-VN--KTLPHGRRSFNLIEVMIDEDQFRKESKKLAALLADPEVEVLGWQQN 1420
            PG + +N  + LP GR + NL +  ID     K  + L ALL+  E +VL   +N
Sbjct: 1436 PGAKGLNNARILPRGRLATNLQQ--IDIPPGSKGERVLNALLSTRE-DVLAVYEN 1487



 Score =  120 bits (302), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 156/703 (22%), Positives = 280/703 (39%), Gaps = 113/703 (16%)

Query: 1324 IQLVPSSQSGVFLAWVVVEGIMVRIPIT-VPRLF-YLNSKDPIVEKFPGRRVNKTLPHGR 1381
            ++ +    S +  AW ++  +++ +  +  P LF  L S  P ++    R + ++LP+ R
Sbjct: 1604 LEFMTEVASDITSAWKLIYRVLMEVMESGRPPLFAVLESGVPTLQLLTQRCLPQSLPYLR 1663

Query: 1382 RSFNLIEVMIDEDQFRKESKKLAALLADPEVEVLGWQQNAAKIGMQRCAASSQWFNERIS 1441
                ++  + DE            LLADP      W +  AK  +QR  AS  W  ERI+
Sbjct: 1664 ----VLGAVEDE-----------RLLADP----FRWTRLLAKRLLQRYFASLLWIEERIA 1704

Query: 1442 LARYA----------------------------HILWISDDGVPDLGGTSEEDECFADEV 1473
             +R +                            H+LW S D        S   E   +  
Sbjct: 1705 FSRLSGIPLCNLAQDTCAHAWDVMFSRSLHSRSHVLWNSHD-------ISIAYEAVEERS 1757

Query: 1474 HQPVLTYPGAYRKVSVELKIHHLSVNALLKSNQVNEMEGGGLFGFDQDMNSGPYNNELCG 1533
             Q V+  PG Y    VE  +  L V A+L S  + E +G  +             + LC 
Sbjct: 1758 RQVVM--PGGYFSWCVEFSLARLDVVAVLFSQIIQEEDGLNV-------------HTLCD 1802

Query: 1534 FDETTSSAPAFRVVKQLIQRCLTDAVTSGNVFADAILQHLYRWLCSPHSKLHDPVLHRIL 1593
               TT     F +++ L+   L   V   N  ADA+L    RW+  P S  ++P L  ++
Sbjct: 1803 RGVTTH----FNILRDLVSDLLGQVV--ANPVADALLASFARWIRDPVSCCYEPRLLELV 1856

Query: 1594 HKVMQKVFAMLLAEFRKLGATIIFANFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFE 1653
             K+  +    +L    KLG   +  +   +++ T K  +  A  +   ++ +LQ + +  
Sbjct: 1857 SKLAHRALTNVLIRLAKLGGRTVKVDGDSIVVLTPKHTIQDAVNFARYMVDSLQDQPMLL 1916

Query: 1654 WIELEPVHFWHSLLFMDQYNYGGIPARADESLD-------DDSQVDIVSSWNIAEYLPKE 1706
             + L+P+ +W   + +D+ ++  +   ++++L           ++ + +++ I   LP +
Sbjct: 1917 LLSLQPIRYWCPFMVLDKRDFACLCLSSEDALGLKEREQMPPERLRVENAFTIWGRLPNK 1976

Query: 1707 IQDHFVLVVSEFMYIPWKHAQKLAASRASLQEGSSCTPSITVAA-AENFESHIVQYVKGE 1765
            ++  F   V   + +       +A  R  + +     P++ +A  +E      V+  K  
Sbjct: 1977 VKSVFFRRVESTLRL-------IAEIREKVFQEIQADPTVVLATKSEQILLRQVKAFKAA 2029

Query: 1766 ISSYFTGKLLSIVRDAIHHMKKMNNDQHNSPGVMQTAANIHKVDAPLEFIKHVCAAFALD 1825
            I +   G+L+    D +H + +   D +    V      +  +   LE+ K +C    L 
Sbjct: 2030 IENKLHGELI----DEVHGLME-RKDLYEEGEVPSGDTPLSGIAVALEYTKTICRLLDLF 2084

Query: 1826 QNVQHDVLV--MRKNLLKYVRVREFAPEAEF-RDPCPSFILPNVICSYCNDCRDLDLCRD 1882
             N   D +V  M  N L+   V  F+P A+   D      L  V CS+CN    LDL   
Sbjct: 2085 HN---DGVVGKMHNNCLRLCGVSPFSPLAQLIPDVEAECRLLMVRCSFCNHDLFLDLGVQ 2141

Query: 1883 MALLAQDWHCAMPQCGQPYDREVMENALLQIVRQRERLYHLQDLVCIRCNQVKAAHLAEQ 1942
               L  DW      C  P     +E+ L++ V      +  QD  C +CN+V ++ +++ 
Sbjct: 2142 EKRLRCDW------CHAPISTSALESHLVRRVNDLVMNHLQQDFKCSKCNEVASSFISQS 2195

Query: 1943 CACAGSFRCKEDASDFRSKMQIFLNIANRQGFQLLQECTSWIL 1985
            C      + K  A    S++Q     A  Q F  L+E     L
Sbjct: 2196 CCGPLVGKGKPIA----SQLQALRKFALIQDFPWLKESVDLAL 2234


>gi|407847559|gb|EKG03236.1| DNA polymerase epsilon catalytic subunit, putative [Trypanosoma
           cruzi]
          Length = 2237

 Score =  606 bits (1562), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 320/654 (48%), Positives = 408/654 (62%), Gaps = 31/654 (4%)

Query: 38  EGDKRLGWLLTFA--------SSSLEDEDTRKVYSCIDLYFVSQDGSTFKSKYKFRPYFY 89
           E   R GWL  +          SS+E +      + + L     DG  F     +RPY +
Sbjct: 12  ESGSRTGWLFNYHPTTVMVADESSVERQGGSGGRAALVLLLQDHDGEIFFVNLFYRPYIF 71

Query: 90  AATKEKMEMDVEAYLRRRYESQ-IADIEILEKEDLDLKNHLSGLHKSYLKISFDTVQQLM 148
            +  E  E +VE  L   +  Q I  +E +EKEDLDL NHLSG  + YLK+ F  VQ L 
Sbjct: 72  VSVVEGHEHEVELGLMSLFGPQLIYHVETVEKEDLDLVNHLSGRRRLYLKVVFRNVQDLT 131

Query: 149 DVKKDLLHVVERNQAKFDAAE--------AYESILTGKREQRPQD-------FLDCIVDL 193
            V+  +   V+RN A   A          +   ++    E  P D       ++D + ++
Sbjct: 132 VVRGRIEKFVKRN-ASMGATNPLLNPFEGSLRDVMAKTFEDDPFDSNTSSERWVDWVQEM 190

Query: 194 REYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLLEKRVD--LLQRAEVHVCAFDIETTKL 251
           REYDV YH+R AID  +  G WYDV I   G     R D      A   VCAFDIETTK 
Sbjct: 191 REYDVKYHMRVAIDLGIFVGVWYDV-IVHEGEAKVTRCDDSAYAPAMPRVCAFDIETTKA 249

Query: 252 PLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNVNNEI 311
           PLKFP  + D I MISYMLDG+GYLI+NR+ V  DI   EYTP+PE+EG F+  N  NE 
Sbjct: 250 PLKFPQPEVDQIYMISYMLDGRGYLIVNRDIVSMDIHPFEYTPRPEYEGIFETFNEPNEK 309

Query: 312 ELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDKNQGECRAK 371
            LLR ++  M++ KP +YVTYNGDYFD+PF+  R+  H   M EE+GF           K
Sbjct: 310 ALLRRFYDEMRKYKPNVYVTYNGDYFDFPFIHARSLFHQLNMREEIGFTQGAEGAFLNHK 369

Query: 372 FACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQMMASYSV 431
              HLDCF WVKRDSYLPQGSQGLKAVTK KLGYDP+EVNPE+M+  A+  PQ MASYSV
Sbjct: 370 IP-HLDCFYWVKRDSYLPQGSQGLKAVTKHKLGYDPIEVNPEEMLPLAQTNPQQMASYSV 428

Query: 432 SDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVICPNKH 491
           SDAV+T+YLY  YVHPFI+SL+TIIPM+PD+VLRKGSG LCE LLMVQAY  NVI PNK 
Sbjct: 429 SDAVSTWYLYQKYVHPFIYSLSTIIPMAPDDVLRKGSGGLCESLLMVQAYANNVIFPNKK 488

Query: 492 QSDPEKFYRNHLLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQLLNNLDRDLQYA 551
           +   EKF+  HL++SETYIGG VE L+SGVFRSD+P SF ++P  Y++L+++LD  L++A
Sbjct: 489 EQQLEKFFNGHLIDSETYIGGRVEALQSGVFRSDIPLSFNMNPDMYQKLIDDLDDALRFA 548

Query: 552 IKVEGKMDLESVSNYDEVKNAIMEKLLRLQEEPIREECPLIYHLDVAAMYPNIILTNRLQ 611
           ++VE  + +  V+NY+EV+  +  KL  L++ P +   P+IYHLDV AMYPNIILTNRLQ
Sbjct: 549 LEVENDVKVNDVTNYEEVQMTMKAKLEFLRDHPRQSSEPIIYHLDVGAMYPNIILTNRLQ 608

Query: 612 PPSIVTDEVCTACDFNRPGK--TCLRKLEWVWRGEIFMGKRSDYYHLKKQIESE 663
           P +I   +VC  C FN P     C R + W W+GE     R +Y  +K Q+E+E
Sbjct: 609 PYAIPKPDVCAGCCFNSPNNEHQCKRTMTWKWKGEFLTASRHEYQRVKAQLENE 662



 Score =  529 bits (1362), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 330/771 (42%), Positives = 457/771 (59%), Gaps = 53/771 (6%)

Query: 674  KSFLDLPKMEQQSRLKDRLKKYCQKAYKRVLDKPVTELREAGICMRENSFYVDTVRSFRD 733
            K+F  L    Q + LK RL +Y +KAY ++ +     LR   +C RENSFYVDTVR FRD
Sbjct: 756  KAFHKLQDTTQFNLLKRRLAEYSRKAYGKIHESREI-LRTDVVCQRENSFYVDTVRLFRD 814

Query: 734  RRYEYKGLNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHKCILNSFYGYVMRKG 793
            RRYEYK   K WK +L  AK +    +++  +   V  +SLQLAHKCILNSFYGYVMRKG
Sbjct: 815  RRYEYKAALKTWKKRLDAAKEAE---EVKLCKSRCVQMESLQLAHKCILNSFYGYVMRKG 871

Query: 794  ARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLPGSFPENFTFKTKD- 852
            +RWYSMEMAG+VTY GA++IQ AR L+++IG  LELDTDGIWC LP  FPENF F T   
Sbjct: 872  SRWYSMEMAGIVTYLGARLIQMARALVQQIGVTLELDTDGIWCCLPKEFPENFIFTTSHP 931

Query: 853  LKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEFEVDGPYKAMILP 912
             K K+TISYPCV+LN  V  + TN QYQT + P    YE  SECSI FEVDGPY AM+LP
Sbjct: 932  SKSKVTISYPCVVLNKMVHDDYTNHQYQTCIAP--GVYEKRSECSIYFEVDGPYLAMLLP 989

Query: 913  ASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFLHGSTIEECY 972
            AS+EEG  IKKRYAVFN DG LAELKGFE+KRRGEL LIK FQ+++F +FL G+++ + Y
Sbjct: 990  ASREEGKSIKKRYAVFNPDGGLAELKGFELKRRGELMLIKDFQSQVFCRFLDGNSLVDSY 1049

Query: 973  SAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLADYGE-QKSCAVTTARRLSD 1031
            ++ A VAN  LD+L ++G+     E+++ +SESS M++ LA+Y + QKS A+TTARR+++
Sbjct: 1050 ASAAVVANAALDMLYSKGEGYETEEILEKLSESSNMTRRLAEYPDSQKSLALTTARRIAE 1109

Query: 1032 FLGDTMVKDKGLRCQYIVACEPQGTPVSERAVPVAIFETDAEIMKFYLRKWCKTSS---D 1088
            FLG  MVKDKGL CQ++++  P G PV+ER +P+ IF  D  +   +LRKW   +S   D
Sbjct: 1110 FLGPQMVKDKGLACQFVISRLPAGRPVTERPIPLTIFRADPTLRLHFLRKWTGDNSLSLD 1169

Query: 1089 VGIRSIVDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLYKKVREKEDKFRQR 1148
            V +R ++DW YY  R ++ +QKIITIPAA+QKV NPVPRV +P+WL+K+++++  +FRQ 
Sbjct: 1170 VDLRQLLDWDYYIARFNACVQKIITIPAALQKVPNPVPRVPYPEWLHKRLQQQNSRFRQV 1229

Query: 1149 KLVDIFSSLKKDDFLNKTCNAETNLMDENVEDLEDFPKKRRN-SVNGPRPIVRCFEVN-N 1206
             L  + + +K ++  +   + E  +     E        RRN   NG +     FE +  
Sbjct: 1230 SLTGMLAKMKANE--SAIPDVEELIPVNKAEVPCTVTLARRNMKKNGVKE--EDFESDCG 1285

Query: 1207 EQKTVKTTDQVDSLRQ--------QLEPSEVSDQQPSSQNAIDTENIDRIVDYKGWLELK 1258
            E +     D VD +RQ         ++  +     P S  A+DT         K WL+ +
Sbjct: 1286 EDRESVFDDDVDRIRQEEEAREEEAVDAFKAKYFSPKSTVALDTAFFT-ASGLKTWLQRQ 1344

Query: 1259 KRKWKDNLDRRKKQKLGSLRASHQANGVSESLGDMINHKEAQRRTGVGSYFRRQETAMTR 1318
            +  W                 +H+A    E L D  N       T V ++F   ++    
Sbjct: 1345 RDAW-----------------THRAKLRREMLLDA-NDTLLVDGTAVSNHFIDIKSKALT 1386

Query: 1319 CHWQIIQLVP-SSQSGVFLAWVVVEGIMVRIPITVPRLFYLNSKDPIVEKFPGRR-VNKT 1376
              W I+++     ++G+      +E  +      VPR   +++   +  + PG + +N T
Sbjct: 1387 ATWHILEVRSDKEETGMVTVIAALEKTLHTFRCVVPRRVIVDAT--LQFQAPGAKGLNNT 1444

Query: 1377 --LPHGRRSFNLIEVMIDEDQFRKESKKLAALLADPEVEVLGWQQNAAKIG 1425
              LP GR + NL +  ID     K  + L ALL+  E +VL   +N    G
Sbjct: 1445 RILPRGRLATNLQQ--IDIPPGSKGERVLNALLSTRE-DVLAVYENHITRG 1492



 Score =  121 bits (304), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 157/703 (22%), Positives = 281/703 (39%), Gaps = 113/703 (16%)

Query: 1324 IQLVPSSQSGVFLAWVVVEGIMVRIPIT-VPRLF-YLNSKDPIVEKFPGRRVNKTLPHGR 1381
            ++ +    S +  AW ++  +++ +  +  P LF  L S  P ++    R + ++LP+ R
Sbjct: 1604 LEFMTEVASDITSAWKLIYRVLMEVMESGRPPLFAVLESGVPTLQLLTQRCLPQSLPYLR 1663

Query: 1382 RSFNLIEVMIDEDQFRKESKKLAALLADPEVEVLGWQQNAAKIGMQRCAASSQWFNERIS 1441
                ++  + DE            LLADP      W +  +K  +QR  AS  W  ERI+
Sbjct: 1664 ----VLGAVEDE-----------RLLADP----FRWTRLLSKRLLQRYFASLLWIEERIA 1704

Query: 1442 LARYA----------------------------HILWISDDGVPDLGGTSEEDECFADEV 1473
             +R +                            H+LW S D        S   E   +  
Sbjct: 1705 FSRLSGIPLCNLAQDTCVHVWDVMFSRSLHSRSHVLWNSHD-------ISIAYEAVEERS 1757

Query: 1474 HQPVLTYPGAYRKVSVELKIHHLSVNALLKSNQVNEMEGGGLFGFDQDMNSGPYNNELCG 1533
             Q V+  PG Y    VE  +  L V A+L S  + E +G  +             + LC 
Sbjct: 1758 RQVVM--PGGYFSWCVEFSLARLDVVAVLFSQIIQEEDGLNV-------------HILCD 1802

Query: 1534 FDETTSSAPAFRVVKQLIQRCLTDAVTSGNVFADAILQHLYRWLCSPHSKLHDPVLHRIL 1593
               TT     F +++ L+   L   V   N  ADA+L    RW+  P S  ++P L  ++
Sbjct: 1803 RGVTTH----FNILRDLVSDLLGQVV--ANPVADALLASFARWIRDPVSCCYEPRLLELV 1856

Query: 1594 HKVMQKVFAMLLAEFRKLGATIIFANFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFE 1653
             K+  +    +L    KLG   +  +   +++ T K  +  A  +   ++ +LQ + +  
Sbjct: 1857 SKLAHRALTNVLIRLAKLGGRTVKVDGDSIVVLTPKHTIQDAVNFARYMVDSLQDQPMLL 1916

Query: 1654 WIELEPVHFWHSLLFMDQYNYGGIPARADESLD-------DDSQVDIVSSWNIAEYLPKE 1706
             + L+P+ +W   + +D+ ++  +   ++++L           ++ + +++ I   LPK+
Sbjct: 1917 LLSLQPIRYWCPFMVLDKRDFACLCLSSEDALGLKEREQMPPERLRVENAFTIWGRLPKK 1976

Query: 1707 IQDHFVLVVSEFMYIPWKHAQKLAASRASLQEGSSCTPSITVAA-AENFESHIVQYVKGE 1765
            ++  F   V   + +       +A  R  + +     P++ +A  +E      V+  K  
Sbjct: 1977 VKSVFFRRVESTLRL-------IAEIREKVFQEIQADPTVVLATKSEQILLRQVKAFKAA 2029

Query: 1766 ISSYFTGKLLSIVRDAIHHMKKMNNDQHNSPGVMQTAANIHKVDAPLEFIKHVCAAFALD 1825
            I +   G+L+    D +H + +   D +    V      +  V   LE+ K +C    L 
Sbjct: 2030 IENKLHGELI----DEVHGLME-RKDLYEEGEVPSGDTPLSGVAVALEYTKTICRLLDLF 2084

Query: 1826 QNVQHDVLV--MRKNLLKYVRVREFAPEAEF-RDPCPSFILPNVICSYCNDCRDLDLCRD 1882
             N   D +V  M  N L+   V  F+P A+   D      L  V CS+CN    LDL   
Sbjct: 2085 HN---DGVVGKMHNNCLRLCGVSPFSPLAQLIPDVEAECRLLMVRCSFCNHDLLLDLGVQ 2141

Query: 1883 MALLAQDWHCAMPQCGQPYDREVMENALLQIVRQRERLYHLQDLVCIRCNQVKAAHLAEQ 1942
               L  DW      C  P     +E+ L++ V      +  QD  C +CN+V ++ +++ 
Sbjct: 2142 EKRLRCDW------CHAPISTSALESHLVRRVNDLVMNHLQQDFKCSKCNEVASSFISQS 2195

Query: 1943 CACAGSFRCKEDASDFRSKMQIFLNIANRQGFQLLQECTSWIL 1985
            C      + K  A    S++Q     A  Q F  L+E     L
Sbjct: 2196 CCGPLVGKGKPIA----SQLQALRKFALIQDFPWLKESVDLAL 2234


>gi|342183518|emb|CCC92998.1| putative DNA polymerase epsilon catalytic subunit [Trypanosoma
           congolense IL3000]
          Length = 2273

 Score =  602 bits (1553), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 310/653 (47%), Positives = 413/653 (63%), Gaps = 30/653 (4%)

Query: 38  EGDKRLGWL-------LTFASSSLEDEDTRKVYSCIDLYFVSQDGSTFKSKYKFRPYFYA 90
           E   R GWL       +T   S+    +  +V + + L F   D   F+    + PY + 
Sbjct: 47  ESGSRTGWLFNYHPTSITAPESAFNRHNASEVRTALTLLFQDHDREVFQVNLFYNPYIFL 106

Query: 91  ATKEKMEMDVEAYLRRRYESQ-IADIEILEKEDLDLKNHLSGLHKSYLKISFDTVQQLMD 149
           +T E  E +VE  +   +  Q I+ +E +EKEDLDL NHLSG  + YLK+SF  VQ L  
Sbjct: 107 STVEGHEHEVEVGMMGLFGPQLISQMEFVEKEDLDLINHLSGRRRLYLKVSFANVQDLTT 166

Query: 150 VKKDLLHVVERNQAKFDA---------------AEAYESILTGKREQRPQDFLDCIVDLR 194
           V+  L  +V+RN +                   A+ +E  L        + + D + ++R
Sbjct: 167 VRGRLEKIVKRNTSMGTGNPLLNPFGTSLGDVMAKTFEDDLVNNNTYS-ERWFDWVREIR 225

Query: 195 EYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLLEKRVD--LLQRAEVHVCAFDIETTKLP 252
           EYDV Y +R  ID  +  G WYD++++  G +   R D      A   VCAFDIETTK P
Sbjct: 226 EYDVKYSMRVGIDLGIFVGSWYDITVNE-GDVRLTRCDNNAYAPAMPRVCAFDIETTKAP 284

Query: 253 LKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNVNNEIE 312
           LKFP  + D I MISY+LDG+GYLI+NRE V  DI   EYTPKPE+EG F+  N  +E  
Sbjct: 285 LKFPQPEVDQIYMISYVLDGRGYLIVNREIVAMDISQFEYTPKPEYEGIFETFNEPDEKA 344

Query: 313 LLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDKNQGECRAKF 372
           LL+ +++ M   +P +YVTYNGDYFD+PF+  R+  H   M EELGF  +       +K 
Sbjct: 345 LLQRFYSEMHRYQPTVYVTYNGDYFDFPFMYARSQFHRLNMREELGFAQNAEGAFVNSKL 404

Query: 373 ACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQMMASYSVS 432
             HLDCF WVKRDSYLPQGSQGLKAVTK KLGY+P+EV+PEDM+  A+  PQ MASYSVS
Sbjct: 405 -IHLDCFYWVKRDSYLPQGSQGLKAVTKYKLGYEPIEVDPEDMLPLAQSNPQQMASYSVS 463

Query: 433 DAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVICPNKHQ 492
           DA++T++LY  YVHPFIFSLATIIPMSPD+VLRKGSG LCE LLMVQAY  NV+ PNK +
Sbjct: 464 DALSTWFLYQKYVHPFIFSLATIIPMSPDDVLRKGSGGLCESLLMVQAYANNVVFPNKKE 523

Query: 493 SDPEKFYRNHLLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQLLNNLDRDLQYAI 552
              E+FY  HL++SETYIGG VE L SGV+RSD+P  F +    Y++L+++LD  LQ+++
Sbjct: 524 IQLERFYEGHLIDSETYIGGRVEALRSGVYRSDIPLHFNMCADMYQKLIDDLDNALQFSL 583

Query: 553 KVEGKMDLESVSNYDEVKNAIMEKLLRLQEEPIREECPLIYHLDVAAMYPNIILTNRLQP 612
           ++E  + +  V+NY+EV++AI  KL  L+++P ++  P+IYHLDV AMYPNIILTNRLQP
Sbjct: 584 EIENGVKMNEVTNYEEVRDAIRAKLESLRDQPRQDIKPIIYHLDVGAMYPNIILTNRLQP 643

Query: 613 PSIVTDEVCTACDFNRPGKT--CLRKLEWVWRGEIFMGKRSDYYHLKKQIESE 663
            +I   EVC  C FN P     C R + W W+ E     R +++ +K Q+E+E
Sbjct: 644 YAIPKPEVCAGCCFNSPSNEYHCKRTMAWKWKAEFLTAGRHEFHRVKAQLENE 696



 Score =  531 bits (1368), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 302/650 (46%), Positives = 412/650 (63%), Gaps = 58/650 (8%)

Query: 674  KSFLDLPKMEQQSRLKDRLKKYCQKAYKRVLDKPVTELREAGICMRENSFYVDTVRSFRD 733
            K++  L +  + + LK RL +Y +KAY ++ +     +R   +C RENSFYVDTVR FRD
Sbjct: 786  KAYYKLQESTKFNMLKKRLAEYSRKAYGKIHESREI-MRSDVVCQRENSFYVDTVRLFRD 844

Query: 734  RRYEYKGLNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHKCILNSFYGYVMRKG 793
            RRYEYK   K+WK KL  AK   ++ +I+  +   V  +SLQLAHKCILNSFYGYVMRKG
Sbjct: 845  RRYEYKAALKMWKKKLDMAK---DTEEIKLCKSRCVQMESLQLAHKCILNSFYGYVMRKG 901

Query: 794  ARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLPGSFPENFTFKTKD- 852
            +RWYSMEMAG+VTY GA +IQ AR L+++IG  LELDTDGIWC LP SFPENFTF T + 
Sbjct: 902  SRWYSMEMAGIVTYLGATLIQMARALVQQIGITLELDTDGIWCCLPQSFPENFTFTTNNP 961

Query: 853  LKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEFEVDGPYKAMILP 912
               K+TISYPCV+LN  V  + TN QYQT   P    YE  SECSI FEVDGPY AM+LP
Sbjct: 962  SSSKVTISYPCVVLNKMVHDDYTNHQYQTCTSP--GVYERRSECSIYFEVDGPYLAMMLP 1019

Query: 913  ASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFLHGSTIEECY 972
            AS+EEG  IKKRYAVF+ DG LA+LKGFE+KRRGEL LIK FQ+++F +FL G+T+ E Y
Sbjct: 1020 ASREEGKSIKKRYAVFDPDGRLADLKGFELKRRGELMLIKDFQSQVFRRFLDGTTLVEAY 1079

Query: 973  SAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLADYGE-QKSCAVTTARRLSD 1031
             + + VAN  LD+L ++G+     E+++ +SESS M++ L++Y E QKS A+TTARR++D
Sbjct: 1080 ESASVVANVALDMLYSKGEGYEADEILEKLSESSNMTRRLSEYPESQKSLALTTARRIAD 1139

Query: 1032 FLGDTMVKDKGLRCQYIVACEPQGTPVSERAVPVAIFETDAEIMKFYLRKWC---KTSSD 1088
            FLG  MVKDKGL CQ++++  P G PV+ERA+P+ IF  D  +   +LRKW      S++
Sbjct: 1140 FLGPQMVKDKGLACQFVISRLPSGRPVTERAIPLTIFRADPTVRTHFLRKWTGDNTLSAN 1199

Query: 1089 VGIRSIVDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLYKKVREKEDKFRQR 1148
            + ++ ++DW YY  R S+ +QKIITIPAA+Q V NPVPRV +P+WL K+V+++  +F+Q 
Sbjct: 1200 IDLQHLLDWDYYIARYSACVQKIITIPAALQHVPNPVPRVPYPEWLQKRVQQRSSRFKQI 1259

Query: 1149 KLVDIFSSLKKDDFLNKTCNAETNLMDENVEDLEDFPKKRRNSVNGPRPIVRCFE-VNNE 1207
             L  +F  +K +              + ++ D+ED      N+        R    V  +
Sbjct: 1260 SLTGMFEKMKSN--------------EGDIPDVEDLVNNSDNT--------RLHRGVGGD 1297

Query: 1208 QKTVKTTDQVDSLRQQLEPSEVSDQQPSSQNAIDT-ENIDRIVDYKGWLELKKRKWKDNL 1266
             +    T  VD     +E  E SD Q SS +A  + +  DR++D    LE       D +
Sbjct: 1298 LQRNGATSGVDHSAYDVE--EKSDNQSSSDSAAGSHDGHDRLLDQAMALE-------DGV 1348

Query: 1267 DRRKKQKLGSLRASHQANGVSESL-GDMINHKEAQRRTGVGSYFRRQETA 1315
                   + +L+  + A G + SL  D  N+       GV ++  RQ+ A
Sbjct: 1349 -------VNALKDKYFAPGSTHSLDADFFNNP------GVDAWLIRQKQA 1385



 Score =  101 bits (251), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 134/621 (21%), Positives = 237/621 (38%), Gaps = 101/621 (16%)

Query: 1406 LLADPEVEVLGWQQNAAKIGMQRCAASSQWFNERISLARYA------------------- 1446
            LL+DP      W +   +  +QR  +S QW  ER++ +R +                   
Sbjct: 1710 LLSDP----FRWVRLLGRRLLQRYCSSPQWIEERVAFSRLSKIPICNLKQDTSVHAWDVL 1765

Query: 1447 ---------HILWISDDGVPDLGGTSEEDECFADEVHQPVLTYPGAYRKVSVELKIHHLS 1497
                     H+LW S D         E             +  PG +    VE  +  L 
Sbjct: 1766 YTRCLHSRNHVLWNSSDVSIAFDSIEERTR---------TVVMPGGHLSWGVEFSLVRLD 1816

Query: 1498 VNALLKSNQVNEMEGGGLFGFDQDMNSGPYNNELCGFDETTSSAPAFRVVKQLIQRCLTD 1557
            V A+L S  + E                P    LC    TT     F +++ L+   L  
Sbjct: 1817 VVAVLFSQMIQE-------------GDDPNAYLLCNQGVTTH----FNIMRDLVSDLLGQ 1859

Query: 1558 AVTSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEFRKLGATIIF 1617
                    AD +L    RW+  P S  ++P L  ++  +  +   + L +  K G   + 
Sbjct: 1860 VKMCPA--ADVLLAGFSRWVRDPISSCYEPRLLELVSTLAHRALTLALIDVGKAGGRAVK 1917

Query: 1618 ANFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLFMDQYNYGGI 1677
             +   +++ T K  +  A ++   ++++ + + +   + L+PV +    + +D+ ++  +
Sbjct: 1918 VDGDSIVVLTPKHTVQDAISFARVMVESHKDQPMLLLLSLKPVRYLCPFVILDKRDFIFL 1977

Query: 1678 PARADES--------LDDDSQVDIVSSWNIAEYLPKEIQDHFVLVVSEFMYIPWKHAQKL 1729
             A++D++        ++ +  V I  S  I   LP   +   +  +   +       + L
Sbjct: 1978 TAQSDQARVLRERDRMNTEEMV-IDHSITIWSKLPPTGRRVLLNRIEGVL-------RSL 2029

Query: 1730 AASRASLQEGSSCTPSITVAAAENFESHIVQYVKGEISSYFT----GKLLSIVRDAIHHM 1785
            AA+R  +   +   PS+ +A          + +K  I+  FT    GKL   V   +H +
Sbjct: 2030 AAAREEILLEAQSDPSVVLATRN-------EQIKLRITKAFTALIEGKLHGEVIGEVHSL 2082

Query: 1786 KKMNNDQHNSPGVMQTAANIHKVDAPLEFIKHVCAAFALDQNVQHDVLVMRKNLLKYVRV 1845
              M      S       A ++     LE+ K +C    L  N    V+ +R N L+   V
Sbjct: 2083 --MECKDLYSEDFPHGEAPLNGTGIALEYTKVLCRFLELFPN-DGAVVKVRNNCLRLCGV 2139

Query: 1846 REFAPEAEF-RDPCPSFILPNVICSYCNDCRDLDLCRDMALLAQDWHCAMPQCGQPYDRE 1904
              F+P A+F  D    +    V CS+CN    LDL    ++  +   C    C  P    
Sbjct: 2140 SPFSPLAQFVSDTDIEWCFLQVQCSFCNAGVFLDL----SVCEKRMRCD--GCSAPISAA 2193

Query: 1905 VMENALLQIVRQRERLYHLQDLVCIRCNQVKAAHLAEQCACAGSFRCKEDASDFRSKMQI 1964
             +E+ L++ V      Y  QD VC +C +V    + +   C G F  K  A   ++++Q+
Sbjct: 2194 AIESHLVRRVNALVMNYTNQDFVCSKCREVTPNFIKQN--CCGPFVGK--AKPIQAQLQV 2249

Query: 1965 FLNIANRQGFQLLQECTSWIL 1985
               +A  QGF  L EC    L
Sbjct: 2250 LKKVATTQGFSWLDECVEAAL 2270


>gi|146101953|ref|XP_001469245.1| putative DNA polymerase epsilon catalytic subunit [Leishmania
           infantum JPCM5]
 gi|134073614|emb|CAM72348.1| putative DNA polymerase epsilon catalytic subunit [Leishmania
           infantum JPCM5]
          Length = 2224

 Score =  600 bits (1547), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 298/570 (52%), Positives = 382/570 (67%), Gaps = 20/570 (3%)

Query: 112 IADIEILEKEDLDLKNHLSGLHKSYLKISFDTVQQLMDVKKDLLHVVERNQAKFDAAEAY 171
           I++I  +EKEDLDL NHLSG  + YLK+ F  VQ L  V+  L   V+ N A   +    
Sbjct: 9   ISEIIAVEKEDLDLVNHLSGKKRVYLKVVFRNVQDLTTVRGRLEKTVKLN-ASLGSENPL 67

Query: 172 ESILTGK---------------REQRPQDFLDCIVDLREYDVPYHIRFAIDNDVRCGQWY 216
            S  +G                       ++D + D+REYDV YH+R AID  V CG WY
Sbjct: 68  RSQFSGSLGDAMAKPFAEDPLYSAAGSSRWMDWVQDIREYDVKYHMRVAIDMKVYCGLWY 127

Query: 217 DVSISSTGPLLEKRVD-LLQRAEVHVCAFDIETTKLPLKFPDADYDIIMMISYMLDGQGY 275
           DV+++  G  +++  D     A   V AFDIETTK PL+FP  + D + MISYMLDG+GY
Sbjct: 128 DVTVTEGGARVQRCDDSRYAPAMPRVIAFDIETTKAPLRFPQPEVDEVYMISYMLDGRGY 187

Query: 276 LIINRECVGEDIEDLEYTPKPEFEGYFKVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGD 335
           LIINRE V EDI   EYTPKPE+EG+F   N  NE   LR +F  M++ KP +YVTYNGD
Sbjct: 188 LIINREIVTEDIAPFEYTPKPEYEGFFDTFNEENEAATLRRFFDEMRKYKPNVYVTYNGD 247

Query: 336 YFDWPFLETRAAHHGFKMSEELGFQCDKNQGECRAKFACHLDCFAWVKRDSYLPQGSQGL 395
           YFD+PF+  RA +HG  M  E+GF      G    K   HLDCF WVKRDSYLPQGSQGL
Sbjct: 248 YFDFPFIHARALYHGMNMRNEIGF-TQMADGAFLNKQIPHLDCFYWVKRDSYLPQGSQGL 306

Query: 396 KAVTKAKLGYDPLEVNPEDMVRFAKEKPQMMASYSVSDAVATYYLYMTYVHPFIFSLATI 455
           KAVTK KLGY+P+EV+PEDM+  A+ +PQ MASYSVSDAV+T+YLY  YVHPFIFSLATI
Sbjct: 307 KAVTKYKLGYEPIEVDPEDMLPLAQSQPQRMASYSVSDAVSTWYLYQKYVHPFIFSLATI 366

Query: 456 IPMSPDEVLRKGSGTLCEMLLMVQAYKANVICPNKHQSDPEKFYRNHLLESETYIGGHVE 515
           IPM PD+VLRKGSG LCE LLMVQA   NV+ PNK +++ E+FY  HL+++ETYIGG VE
Sbjct: 367 IPMPPDDVLRKGSGGLCESLLMVQAEANNVVFPNKKETERERFYEGHLIDTETYIGGRVE 426

Query: 516 CLESGVFRSDLPTSFKLDPSAYEQLLNNLDRDLQYAIKVEGKMDLESVSNYDEVKNAIME 575
            L SGV+RSD+P +F ++P  Y+ L++++D  L++ ++VE  + +E V+N +EV+ AI+ 
Sbjct: 427 ALRSGVYRSDIPMTFDMNPDTYQSLIDDVDEALRFTLEVENGVKVEEVTNLEEVRAAILA 486

Query: 576 KLLRLQEEPIREECPLIYHLDVAAMYPNIILTNRLQPPSIVTDEVCTACDFNRPGK--TC 633
           KL  L++ P ++E P IYHLDV AMYPNIILTNRLQP +I   +VC  C FN P     C
Sbjct: 487 KLTNLRDRPHQQEKPFIYHLDVGAMYPNIILTNRLQPYAIARPDVCAGCCFNSPNNEAQC 546

Query: 634 LRKLEWVWRGEIFMGKRSDYYHLKKQIESE 663
            R + W WR E+F   R ++  +K Q+E+E
Sbjct: 547 KRVMSWKWRAELFTAGRYEFQRVKAQLENE 576



 Score =  519 bits (1337), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 263/490 (53%), Positives = 354/490 (72%), Gaps = 11/490 (2%)

Query: 674  KSFLDLPKMEQQSRLKDRLKKYCQKAYKRVLDKPVTELREAGICMRENSFYVDTVRSFRD 733
            K++  L +  Q + LK RL +Y +KAY ++ +     +R   +C RENSFYVDTVR FRD
Sbjct: 671  KAYHKLNENTQFNMLKRRLSEYSRKAYGKIHETREV-MRSNVVCQRENSFYVDTVRLFRD 729

Query: 734  RRYEYKGLNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHKCILNSFYGYVMRKG 793
            RRYEYK   K WK +L  AK   +S + +  Q   V  +SLQLAHKCILNSFYGYVMRKG
Sbjct: 730  RRYEYKAALKTWKKRLDAAK---DSDERKVCQSRCVQMESLQLAHKCILNSFYGYVMRKG 786

Query: 794  ARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLPGSFPENFTFKTKDL 853
            +RW SMEMAG+VTY GA +IQ AR L+++IG  LELDTDGIWC LP +FPENFT  T + 
Sbjct: 787  SRWSSMEMAGIVTYLGATLIQMARSLVQQIGVTLELDTDGIWCCLPNTFPENFTLATTNP 846

Query: 854  KK-KLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEFEVDGPYKAMILP 912
             K K++ISYPCV+LN  V    +N QYQ LV   +  Y+T SECSI FEVDGPY AM+LP
Sbjct: 847  SKPKISISYPCVVLNKMVHDRYSNHQYQDLVS--TGVYKTRSECSIYFEVDGPYLAMLLP 904

Query: 913  ASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFLHGSTIEECY 972
            AS+EEG  IKKRYAVF+ DG+LAELKGFE+KRRGEL L+K FQ+++F +FL G T+ + Y
Sbjct: 905  ASREEGKSIKKRYAVFSPDGSLAELKGFELKRRGELMLVKDFQSQVFRRFLDGRTLADAY 964

Query: 973  SAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLADYGE-QKSCAVTTARRLSD 1031
            ++ A VA+  LD+L+++G+     E+++ I+ESS M++ L++Y E QKS A+TTARR+++
Sbjct: 965  ASAAVVADAALDMLESKGEGYDTEEILEKITESSNMTRRLSEYPESQKSLAITTARRIAE 1024

Query: 1032 FLGDTMVKDKGLRCQYIVACEPQGTPVSERAVPVAIFETDAEIMKFYLRKWCKTS---SD 1088
            FLG  MVKDKGL C +I++  P G PV+ERA+PV IF  D  +   +LRKW   +   S+
Sbjct: 1025 FLGPQMVKDKGLACHFIISRMPAGRPVTERAIPVTIFRADPAVRTHFLRKWTADTTVPSE 1084

Query: 1089 VGIRSIVDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLYKKVREKEDKFRQR 1148
            + +++++DW YY  R S+ +QKI++IPAA+Q + NPVPRVVHPDWL K++R +  ++RQ 
Sbjct: 1085 LNLKTLLDWDYYTARFSACVQKIVSIPAALQSLPNPVPRVVHPDWLEKRIRHRNSRYRQV 1144

Query: 1149 KLVDIFSSLK 1158
             LV + S ++
Sbjct: 1145 SLVGMLSKVQ 1154



 Score =  122 bits (305), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 141/622 (22%), Positives = 246/622 (39%), Gaps = 107/622 (17%)

Query: 1406 LLADPEVEVLGWQQNAAKIGMQRCAASSQWFNERISLARYA------------------- 1446
            LL+DP      W +  A+   +R  AS  W  ER++L+R +                   
Sbjct: 1653 LLSDP----FRWTRLLARRLFERFFASLLWVEERLALSRVSGIPLCNIAQDSCVHVLDVL 1708

Query: 1447 ---------HILWISDDGVPDLGGTSEE--DECFADEVHQPVLTYPGAYRKVSVELKIHH 1495
                     H+LW S D +       E   + C A           G Y    VE  +  
Sbjct: 1709 YSRALHRRHHVLWCSSDPLITFDTVEERPREVCMA-----------GGYTSWCVEFGLSR 1757

Query: 1496 LSVNALLKSNQVNEMEGGGLFGFDQDMNSGPYNNELCGFDETTSSAPAFRVVKQLIQRCL 1555
            L V ALL S  + E                P    LC    +T     F +++ L+   L
Sbjct: 1758 LDVVALLFSQAIEE-------------GDDPNARVLCDRGVSTH----FNILRDLVADLL 1800

Query: 1556 TDAVTSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEFRKLGATI 1615
              A+   N+ AD +L ++ RWL  P S  ++P L  +L  +  +    +L    KLG   
Sbjct: 1801 GQAME--NILADTLLNNVARWLRDPASSCYEPRLVELLSSLAHRALTGILLRLAKLGGRA 1858

Query: 1616 IFANFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLFMDQYNYG 1675
            +  + S V + T K+ L  A ++   L  +LQ + +   + L+P+ +W   + +D  +Y 
Sbjct: 1859 VKVDGSSVTVLTSKYSLQEAVSFARFLTASLQDQPMLLLLSLQPLRYWCPYVVLDPCDYA 1918

Query: 1676 GI--------------PARADESLDDDSQVDIVSSWNIAEYLPKEIQDHFVLVVSEFMYI 1721
            G+              P RAD        + +     +A  LP   ++ FV  V E +Y 
Sbjct: 1919 GLFITEDAIKLKQGEEPTRAD--------LHVAHQLTMASRLPSRARNTFVERVVETLY- 1969

Query: 1722 PWKHAQKLAASRASLQEGSSCTPSITVAAAENFESHIVQYVKGEISSYFTGKLLSIVRDA 1781
                  +L AS   +   +    ++T+A   +   H+ + +  +    F G L + + D 
Sbjct: 1970 ------QLNASTHHVYCDTVGDHTVTLATRHD---HLTRRLLQDSQKLFEGVLQTDIMDE 2020

Query: 1782 IHHM---KKMNNDQHNSPGVMQTAANIHKVDAPLEFIKHVCAAFALDQNVQHDVLVMRKN 1838
            +  +   + +  ++ ++                LE+ K VC    L       V  +R N
Sbjct: 2021 VQRVMDTRDLYTEEEHAAHERGELTLWSSGAVALEYAKCVCRVLELIP-CNGAVGKVRNN 2079

Query: 1839 LLKYVRVREFAPEAEFR-DPCPSFILPNVICSYCNDCRDLDLCRDMALLAQDWHCAMPQC 1897
             ++   +  F+ +++F+ DP  +  L +V CS+CN    +DL      +   + C     
Sbjct: 2080 CMRLCGISPFSAQSQFQADPFLAHRLQSVTCSFCNSHISIDLLVRRKSVTSPFTCTACA- 2138

Query: 1898 GQPYDREVMENALLQIVRQRERLYHLQDLVCIRCNQVKAAHLAEQCACAGSFRCKEDASD 1957
              P     ME  L++ V Q  R+Y+ QD VC +C ++   ++AE+  C G+   K  A+ 
Sbjct: 2139 -APIAAASMEGTLVRHVSQLLRVYNQQDFVCTKCREMTTTYVAER--CCGALVGK--AAP 2193

Query: 1958 FRSKMQIFLNIANRQGFQLLQE 1979
               +++    +A  QGF  L E
Sbjct: 2194 VEGELRALHRLAKIQGFAWLAE 2215


>gi|71414065|ref|XP_809148.1| DNA polymerase epsilon catalytic subunit [Trypanosoma cruzi strain
           CL Brener]
 gi|70873485|gb|EAN87297.1| DNA polymerase epsilon catalytic subunit, putative [Trypanosoma
           cruzi]
          Length = 2195

 Score =  600 bits (1547), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 313/620 (50%), Positives = 397/620 (64%), Gaps = 23/620 (3%)

Query: 64  SCIDLYFVSQDGSTFKSKYKFRPYFYAATKEKMEMDVEAYLRRRYESQ-IADIEILEKED 122
           + + L     DG  F     +RPY + +  E  E +VE  L   +  Q I  +E +EKED
Sbjct: 4   AALVLLLQDHDGEIFFVNLFYRPYMFVSVVEGHEHEVELGLMSLFGPQLIYHVETVEKED 63

Query: 123 LDLKNHLSGLHKSYLKISFDTVQQLMDVKKDLLHVVERNQAKFDAAE--------AYESI 174
           LDL NHLSG  + YLK+ F  VQ L  V+  L   V+RN A   A          +   +
Sbjct: 64  LDLVNHLSGRRRLYLKVVFRNVQDLTVVRGRLEKFVKRN-ASMGATNPLLNPFEGSLRDV 122

Query: 175 LTGKREQRPQD-------FLDCIVDLREYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLL 227
           +    E  P D       ++D + ++REYDV YH+R AID  +  G WYDV I   G   
Sbjct: 123 MAKTFEDDPFDSNTSSERWVDWVQEMREYDVKYHMRVAIDLGIFVGVWYDV-IVHEGETK 181

Query: 228 EKRVD--LLQRAEVHVCAFDIETTKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGE 285
             R D      A   VCAFDIETTK PLKFP  + D I MISYMLDG+GYLI+NR+ V  
Sbjct: 182 VTRCDDSAYAPAMPRVCAFDIETTKAPLKFPQPEVDQIYMISYMLDGRGYLIVNRDIVSM 241

Query: 286 DIEDLEYTPKPEFEGYFKVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETR 345
           DI   EYTP+PE+EG F+  N  NE  LLR ++  M++ KP +YVTYNGDYFD+PF+  R
Sbjct: 242 DIHPFEYTPRPEYEGIFETFNEPNEKALLRRFYDEMRKYKPNVYVTYNGDYFDFPFIHAR 301

Query: 346 AAHHGFKMSEELGFQCDKNQGECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGY 405
           +  H   M EE+GF           K   HLDCF WVKRDSYLPQGSQGLKAVTK KLGY
Sbjct: 302 SLFHQLNMREEIGFTQGAEGAFLNHKIP-HLDCFYWVKRDSYLPQGSQGLKAVTKHKLGY 360

Query: 406 DPLEVNPEDMVRFAKEKPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLR 465
           DP+EVNPE+M+  A+  PQ MASYSVSDAV+T+YLY  YVHPFI+SL+TIIPM+PD+VLR
Sbjct: 361 DPIEVNPEEMLPLAQTNPQQMASYSVSDAVSTWYLYQKYVHPFIYSLSTIIPMAPDDVLR 420

Query: 466 KGSGTLCEMLLMVQAYKANVICPNKHQSDPEKFYRNHLLESETYIGGHVECLESGVFRSD 525
           KGSG LCE LLMVQAY  NVI PNK +   EKF+  HL++SETYIGG VE L+SGVFRSD
Sbjct: 421 KGSGGLCESLLMVQAYANNVIFPNKKEQQLEKFFNGHLIDSETYIGGRVEALQSGVFRSD 480

Query: 526 LPTSFKLDPSAYEQLLNNLDRDLQYAIKVEGKMDLESVSNYDEVKNAIMEKLLRLQEEPI 585
           +P  F ++P  Y++L+++LD  L++A++VE  + +  V+NY+EV+ A+  KL  L++ P 
Sbjct: 481 IPLGFNMNPDMYQKLIDDLDDALRFALEVENDVKVNDVTNYEEVQMAMKAKLEFLRDHPR 540

Query: 586 REECPLIYHLDVAAMYPNIILTNRLQPPSIVTDEVCTACDFNRPGK--TCLRKLEWVWRG 643
           +   P+IYHLDV AMYPNIILTNRLQP +I   +VC  C FN P     C R + W W+G
Sbjct: 541 QSSEPIIYHLDVGAMYPNIILTNRLQPYAIPKPDVCAGCCFNSPNNEHQCKRTMTWKWKG 600

Query: 644 EIFMGKRSDYYHLKKQIESE 663
           E     R +Y  +K Q+E+E
Sbjct: 601 EFLTASRHEYQRVKAQLENE 620



 Score =  530 bits (1366), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 332/775 (42%), Positives = 459/775 (59%), Gaps = 71/775 (9%)

Query: 674  KSFLDLPKMEQQSRLKDRLKKYCQKAYKRVLDKPVTELREAGICMRENSFYVDTVRSFRD 733
            K+F  L    Q + LK RL +Y +KAY ++ +     LR   +C RENSFYVDTVR FRD
Sbjct: 714  KAFHKLQDTTQFNLLKRRLAEYSRKAYGKIHESREI-LRTDVVCQRENSFYVDTVRLFRD 772

Query: 734  RRYEYKGLNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHKCILNSFYGYVMRKG 793
            RRYEYK   K WK +L  AK +    +++  +   V  +SLQLAHKCILNSFYGYVMRKG
Sbjct: 773  RRYEYKAALKTWKKRLDAAKEAE---EVKLCKSRCVQMESLQLAHKCILNSFYGYVMRKG 829

Query: 794  ARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLPGSFPENFTFKTKD- 852
            +RWYSMEMAG+VTY GA++IQ AR L+++IG  LELDTDGIWC LP  FPENF F T   
Sbjct: 830  SRWYSMEMAGIVTYLGARLIQMARALVQQIGVTLELDTDGIWCCLPKEFPENFIFTTSHP 889

Query: 853  LKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEFEVDGPYKAMILP 912
             K K+TISYPCV+LN  V  + TN QYQT + P    YE  SECSI FEVDGPY AM+LP
Sbjct: 890  SKSKVTISYPCVVLNKMVHDDYTNHQYQTCIAP--GVYEKRSECSIYFEVDGPYLAMLLP 947

Query: 913  ASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFLHGSTIEECY 972
            AS+EEG  IKKRYAVFN DG LAELKGFE+KRRGEL LIK FQ+++F +FL G+++ + Y
Sbjct: 948  ASREEGKSIKKRYAVFNPDGGLAELKGFELKRRGELMLIKDFQSQVFCRFLDGNSLVDSY 1007

Query: 973  SAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLADYGE-QKSCAVTTARRLSD 1031
            ++ A VAN  LD+L ++G+     E+++ +SESS M++ LA+Y + QKS A+TTARR+++
Sbjct: 1008 ASAAVVANAALDMLYSKGEGYETEEILEKLSESSNMTRRLAEYPDSQKSLALTTARRIAE 1067

Query: 1032 FLGDTMVKDKGLRCQYIVACEPQGTPVSERAVPVAIFETDAEIMKFYLRKWCKTSS---D 1088
            FLG  MVKDKGL CQ++++  P G PV+ER +P+ IF  D  +   +LRKW   +S   D
Sbjct: 1068 FLGPQMVKDKGLACQFVISRLPAGRPVTERPIPLTIFRADPTLRLHFLRKWTGDNSLSLD 1127

Query: 1089 VGIRSIVDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLYKKVREKEDKFRQR 1148
            V +R ++DW YY  R ++ +QKIITIPAA+QKV NPVPRV +P+WL+K+++++  +FRQ 
Sbjct: 1128 VDLRQLLDWDYYIARFNACVQKIITIPAALQKVPNPVPRVPYPEWLHKRLQQQNSRFRQV 1187

Query: 1149 KLVDIFSSLKKDDFLNKTCNAETNLMDENVEDLEDFPK---------KRRNS-VNGPRPI 1198
             L  + + +K +         E+ + D  VE+L    K          RRN+  NG +  
Sbjct: 1188 SLTGMLAKMKAN---------ESAIPD--VEELIPLNKAGVPCTVTLARRNTKKNGVKE- 1235

Query: 1199 VRCFEVN-NEQKTVKTTDQVDSLRQ--------QLEPSEVSDQQPSSQNAIDTENIDRIV 1249
               FE +  E +     D VD +RQ         ++  +     P S  A+DT       
Sbjct: 1236 -EDFESDCGEDRESVFDDDVDRIRQEEEAREEEAVDALKAKYFSPKSTVALDTAFFT-AS 1293

Query: 1250 DYKGWLELKKRKWKDNLDRRKKQKLGSLRASHQANGVSESLGDMINHKEAQRRTGVGSYF 1309
              K WL+ ++  W                 +H+A    E L D  N       T V ++F
Sbjct: 1294 GLKTWLQRQRDAW-----------------THRAKLRREMLLDA-NDTLLVDGTAVSNHF 1335

Query: 1310 RRQETAMTRCHWQIIQLVP-SSQSGVFLAWVVVEGIMVRIPITVPRLFYLNSKDPIVEKF 1368
               ++      W I+++     ++G+      +E  +      VPR   +++   +  + 
Sbjct: 1336 IDIKSKALTATWHILEVRSDKEETGMVTVIAALEKTLHTFRCVVPRRVIVDAT--LQFQA 1393

Query: 1369 PGRRV---NKTLPHGRRSFNLIEVMIDEDQFRKESKKLAALLADPEVEVLGWQQN 1420
            PG +V    + LP GR + NL +  ID     K  + L ALL+  E +VL   +N
Sbjct: 1394 PGAKVLNNTRILPRGRLATNLQQ--IDIPPGSKGERVLNALLSTRE-DVLAVYEN 1445



 Score =  124 bits (311), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 158/703 (22%), Positives = 282/703 (40%), Gaps = 113/703 (16%)

Query: 1324 IQLVPSSQSGVFLAWVVVEGIMVRIPIT-VPRLF-YLNSKDPIVEKFPGRRVNKTLPHGR 1381
            ++ +    S +  AW ++  +++ +  +  P LF  L S  P ++    R + ++LP+ R
Sbjct: 1562 LEFMTEVASDITSAWKLIYRVLMEVMESGRPPLFAVLESGVPTLQLLTQRSLPQSLPYLR 1621

Query: 1382 RSFNLIEVMIDEDQFRKESKKLAALLADPEVEVLGWQQNAAKIGMQRCAASSQWFNERIS 1441
                ++  + DE            LLADP      W +  AK  +QR  AS  W  ERI+
Sbjct: 1622 ----VLGAVEDE-----------RLLADP----FRWTRLLAKRLLQRYFASLLWIEERIA 1662

Query: 1442 LARYA----------------------------HILWISDDGVPDLGGTSEEDECFADEV 1473
             +R +                            H+LW S D        S   E   +  
Sbjct: 1663 FSRLSGIPLCNLAQDTCAHVWDVMFSRSLHSRSHVLWNSHD-------ISIAYEAVEERS 1715

Query: 1474 HQPVLTYPGAYRKVSVELKIHHLSVNALLKSNQVNEMEGGGLFGFDQDMNSGPYNNELCG 1533
             Q V+  PG Y    VE  +  L V A+L S  + E +G  +             + LC 
Sbjct: 1716 RQVVM--PGGYFSWCVEFSLARLDVVAVLFSQIIQEEDGLNV-------------HILCD 1760

Query: 1534 FDETTSSAPAFRVVKQLIQRCLTDAVTSGNVFADAILQHLYRWLCSPHSKLHDPVLHRIL 1593
               TT     F +++ L+   L   V   N  ADA+L    RW+  P S  ++P L  ++
Sbjct: 1761 RGVTTH----FNILRDLVSDLLGQVV--ANPVADALLASFARWIRDPVSCCYEPRLLELV 1814

Query: 1594 HKVMQKVFAMLLAEFRKLGATIIFANFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFE 1653
             K+  +    +L    KLG   +  +   +++ T K  +  A ++   ++ +LQ + +  
Sbjct: 1815 SKLAHRALTNVLIRLAKLGGRTVKVDGDSIVVLTPKHTIQDAVSFARYMVDSLQDQPMLL 1874

Query: 1654 WIELEPVHFWHSLLFMDQYNYGGIPARADESLD-------DDSQVDIVSSWNIAEYLPKE 1706
             + L+P+ +W   + +D+ ++  +   ++++L           ++ + +++ I   LPK+
Sbjct: 1875 LLSLQPIRYWCPFMVLDKRDFACLCLSSEDALGLKEREQMPPERLRVENAFTIWGRLPKK 1934

Query: 1707 IQDHFVLVVSEFMYIPWKHAQKLAASRASLQEGSSCTPSITVAA-AENFESHIVQYVKGE 1765
            ++  F   V   + +       +A  R  + +     P++ +A  +E      V+  K  
Sbjct: 1935 VKSVFFRRVESTLRL-------IAEIREKVFQEIQADPTVVLATKSEQILLRQVKAFKAA 1987

Query: 1766 ISSYFTGKLLSIVRDAIHHMKKMNNDQHNSPGVMQTAANIHKVDAPLEFIKHVCAAFALD 1825
            I +   G+L+    D +H + +   D +    V      +  V   LE+ K +C    L 
Sbjct: 1988 IENKLHGELI----DEVHGLME-RKDLYEEGEVPSGDTPLSGVAVALEYTKTICRLLDLF 2042

Query: 1826 QNVQHDVLV--MRKNLLKYVRVREFAPEAEF-RDPCPSFILPNVICSYCNDCRDLDLCRD 1882
             N   D +V  M  N L+   V  F+P A+   D      L  V CS+CN    LDL   
Sbjct: 2043 HN---DGVVGKMHNNCLRLCGVSPFSPLAQLIPDVEAECRLLMVRCSFCNHDLLLDLGVQ 2099

Query: 1883 MALLAQDWHCAMPQCGQPYDREVMENALLQIVRQRERLYHLQDLVCIRCNQVKAAHLAEQ 1942
               L  DW      C  P     +E+ L++ V      +  QD  C +CN+V ++ +++ 
Sbjct: 2100 EKRLRCDW------CHAPISTSALESHLVRRVNDLVMNHLQQDFKCSKCNEVASSFISQS 2153

Query: 1943 CACAGSFRCKEDASDFRSKMQIFLNIANRQGFQLLQECTSWIL 1985
            C      + K  A    S++Q     A  Q F  L+E     L
Sbjct: 2154 CCGPLVGKGKPIA----SQLQALRKFALIQDFPWLKESVDLAL 2192


>gi|398023719|ref|XP_003865021.1| DNA polymerase epsilon catalytic subunit, putative [Leishmania
           donovani]
 gi|322503257|emb|CBZ38342.1| DNA polymerase epsilon catalytic subunit, putative [Leishmania
           donovani]
          Length = 2223

 Score =  598 bits (1543), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 298/570 (52%), Positives = 381/570 (66%), Gaps = 20/570 (3%)

Query: 112 IADIEILEKEDLDLKNHLSGLHKSYLKISFDTVQQLMDVKKDLLHVVERNQAKFDAAEAY 171
           I++I  +EKEDLDL NHLSG  + YLK+ F  VQ L  V+  L   V+ N A   +    
Sbjct: 9   ISEIIAVEKEDLDLVNHLSGKKRVYLKVVFRNVQDLTTVRGRLEKTVKLN-ASLGSENPL 67

Query: 172 ESILTGK---------------REQRPQDFLDCIVDLREYDVPYHIRFAIDNDVRCGQWY 216
            S  +G                       ++D + D+REYDV YH+R AID  V CG WY
Sbjct: 68  RSQFSGSLGDAMAKPFAEDPLYSAAGSSRWMDWVQDIREYDVKYHMRVAIDMKVYCGLWY 127

Query: 217 DVSISSTGPLLEKRVD-LLQRAEVHVCAFDIETTKLPLKFPDADYDIIMMISYMLDGQGY 275
           DV+++  G  +++  D     A   V AFDIETTK PL+FP  + D + MISYMLDG+GY
Sbjct: 128 DVTVTEGGARVQRCDDSRYAPAMPRVIAFDIETTKAPLRFPQPEVDEVYMISYMLDGRGY 187

Query: 276 LIINRECVGEDIEDLEYTPKPEFEGYFKVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGD 335
           LIINRE V EDI   EYTPKPE+EG+F   N  NE   LR +F  M++ KP +YVTYNGD
Sbjct: 188 LIINREIVTEDIAPFEYTPKPEYEGFFDTFNEENEAATLRRFFDEMRKYKPNVYVTYNGD 247

Query: 336 YFDWPFLETRAAHHGFKMSEELGFQCDKNQGECRAKFACHLDCFAWVKRDSYLPQGSQGL 395
           YFD+PF+  RA +HG  M  E+GF      G    K   HLDCF WVKRDSYLPQGSQGL
Sbjct: 248 YFDFPFIHARALYHGMNMRNEIGFT-QMADGAFLNKQIPHLDCFYWVKRDSYLPQGSQGL 306

Query: 396 KAVTKAKLGYDPLEVNPEDMVRFAKEKPQMMASYSVSDAVATYYLYMTYVHPFIFSLATI 455
           KAVTK KLGY+P+EV+PEDM+  A+ +PQ MASYSVSDAV+T+YLY  YVHPFIFSLATI
Sbjct: 307 KAVTKYKLGYEPIEVDPEDMLPLAQSQPQRMASYSVSDAVSTWYLYQKYVHPFIFSLATI 366

Query: 456 IPMSPDEVLRKGSGTLCEMLLMVQAYKANVICPNKHQSDPEKFYRNHLLESETYIGGHVE 515
           IPM PD+VLRKGSG LCE LLMVQA   NV+ PNK + + E+FY  HL+++ETYIGG VE
Sbjct: 367 IPMPPDDVLRKGSGGLCESLLMVQAEANNVVFPNKKEIERERFYEGHLIDTETYIGGRVE 426

Query: 516 CLESGVFRSDLPTSFKLDPSAYEQLLNNLDRDLQYAIKVEGKMDLESVSNYDEVKNAIME 575
            L SGV+RSD+P +F ++P  Y+ L++++D  L++ ++VE  + +E V+N +EV+ AI+ 
Sbjct: 427 ALRSGVYRSDIPMTFDMNPDTYQSLIDDVDEALRFTLEVENGVKVEEVTNLEEVRAAILA 486

Query: 576 KLLRLQEEPIREECPLIYHLDVAAMYPNIILTNRLQPPSIVTDEVCTACDFNRPGK--TC 633
           KL  L++ P ++E P IYHLDV AMYPNIILTNRLQP +I   +VC  C FN P     C
Sbjct: 487 KLTNLRDRPHQQEKPFIYHLDVGAMYPNIILTNRLQPYAIARPDVCAGCCFNSPNNEAQC 546

Query: 634 LRKLEWVWRGEIFMGKRSDYYHLKKQIESE 663
            R + W WR E+F   R ++  +K Q+E+E
Sbjct: 547 KRVMSWKWRAELFTAGRYEFQRVKAQLENE 576



 Score =  518 bits (1334), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 262/490 (53%), Positives = 354/490 (72%), Gaps = 11/490 (2%)

Query: 674  KSFLDLPKMEQQSRLKDRLKKYCQKAYKRVLDKPVTELREAGICMRENSFYVDTVRSFRD 733
            K++  L +  Q + LK RL +Y +KAY ++ +     +R   +C RENSFYVDTVR FRD
Sbjct: 671  KAYHKLNENTQFNMLKRRLSEYSRKAYGKIHETREV-MRSNVVCQRENSFYVDTVRLFRD 729

Query: 734  RRYEYKGLNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHKCILNSFYGYVMRKG 793
            RRYEYK   K WK +L  AK   +S + +  Q   V  +SLQLAHKCILNSFYGYVMRKG
Sbjct: 730  RRYEYKAALKTWKKRLDAAK---DSDERKVCQSRCVQMESLQLAHKCILNSFYGYVMRKG 786

Query: 794  ARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLPGSFPENFTFKTKDL 853
            +RW SMEMAG+VTY GA +IQ AR L+++IG  LELDTDGIWC LP +FPENFT  T + 
Sbjct: 787  SRWSSMEMAGIVTYLGATLIQMARSLVQQIGVTLELDTDGIWCCLPNTFPENFTLATTNP 846

Query: 854  KK-KLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEFEVDGPYKAMILP 912
             K K++ISYPCV+LN  V    +N QYQ LV   +  Y+T SECSI FEVDGPY AM+LP
Sbjct: 847  SKPKISISYPCVVLNKMVHDRYSNHQYQDLVS--TGVYKTRSECSIYFEVDGPYLAMLLP 904

Query: 913  ASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFLHGSTIEECY 972
            AS+EEG  IKKRYAVF+ DG+LAELKGFE+KRRGEL L+K FQ+++F +FL G T+ + Y
Sbjct: 905  ASREEGKSIKKRYAVFSPDGSLAELKGFELKRRGELMLVKDFQSQVFRRFLDGRTLADAY 964

Query: 973  SAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLADYGE-QKSCAVTTARRLSD 1031
            ++ A VA+  LD+L+++G+     E+++ I+ESS M++ L++Y E QKS A+TTARR+++
Sbjct: 965  ASAAVVADAALDMLESKGEGYDTEEILEKITESSNMTRRLSEYPESQKSLAITTARRIAE 1024

Query: 1032 FLGDTMVKDKGLRCQYIVACEPQGTPVSERAVPVAIFETDAEIMKFYLRKWCKTS---SD 1088
            FLG  MVKDKGL C +I++  P G PV+ERA+PV IF  D  +   +LRKW   +   S+
Sbjct: 1025 FLGPQMVKDKGLACHFIISRMPAGRPVTERAIPVTIFRADPAVRTHFLRKWTADTTVPSE 1084

Query: 1089 VGIRSIVDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLYKKVREKEDKFRQR 1148
            + +++++DW YY  R S+ +QKI++IPAA+Q + NPVPRVVHPDWL K++R +  ++RQ 
Sbjct: 1085 LNLKTLLDWDYYTARFSACVQKIVSIPAALQSLPNPVPRVVHPDWLEKRIRHRNSRYRQV 1144

Query: 1149 KLVDIFSSLK 1158
             L+ + S ++
Sbjct: 1145 SLLGMLSKVQ 1154



 Score =  120 bits (301), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 140/622 (22%), Positives = 246/622 (39%), Gaps = 107/622 (17%)

Query: 1406 LLADPEVEVLGWQQNAAKIGMQRCAASSQWFNERISLARYA------------------- 1446
            LL+DP      W +  A+   +R  AS  W  ER++L+R +                   
Sbjct: 1652 LLSDP----FRWTRLLARRLFERFFASLLWVEERLALSRVSGIPLCNIAQDSCVHVLDVL 1707

Query: 1447 ---------HILWISDDGVPDLGGTSEE--DECFADEVHQPVLTYPGAYRKVSVELKIHH 1495
                     H+LW S D +       E   + C A           G Y    VE  +  
Sbjct: 1708 YSRALHRRHHVLWCSSDPLITFDTVEERPREVCMA-----------GGYTSWCVEFGLSR 1756

Query: 1496 LSVNALLKSNQVNEMEGGGLFGFDQDMNSGPYNNELCGFDETTSSAPAFRVVKQLIQRCL 1555
            L V ALL S  + E                P    LC    +T     F +++ L+   L
Sbjct: 1757 LDVVALLFSQAIEE-------------GDDPNARVLCDRGVSTH----FNILRDLVADLL 1799

Query: 1556 TDAVTSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEFRKLGATI 1615
              A+   N+ AD +L ++ RWL  P S  ++P L  +L  +  +    +L    KLG   
Sbjct: 1800 GQAME--NILADTLLNNVARWLRDPASSCYEPRLVELLSSLAHRALTGILLRLAKLGGRA 1857

Query: 1616 IFANFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLFMDQYNYG 1675
            +  + S V + T K+ L  A ++   L  +LQ + +   + L+P+ +W   + +D  +Y 
Sbjct: 1858 VKVDGSSVTVLTSKYSLQEAVSFARFLTASLQDQPMLLLLSLQPLRYWCPYVVLDPCDYA 1917

Query: 1676 GI--------------PARADESLDDDSQVDIVSSWNIAEYLPKEIQDHFVLVVSEFMYI 1721
            G+              P RAD        + +     +A  LP   ++ FV  V E +Y 
Sbjct: 1918 GLFITEDAIKLKQGEEPTRAD--------LHVAHQLTMASRLPSRARNTFVERVVETLY- 1968

Query: 1722 PWKHAQKLAASRASLQEGSSCTPSITVAAAENFESHIVQYVKGEISSYFTGKLLSIVRDA 1781
                  +L AS   +   +    ++T+A   +   H+ + +  +    F G L + + D 
Sbjct: 1969 ------QLNASTHHVYCDTVGDHTVTLATRHD---HLTRRLLQDSQKLFEGVLQTDIMDE 2019

Query: 1782 IHHM---KKMNNDQHNSPGVMQTAANIHKVDAPLEFIKHVCAAFALDQNVQHDVLVMRKN 1838
            +  +   + +  ++ ++                LE+ K VC    L       V  +R N
Sbjct: 2020 VQRVMDTRDLYTEEEHAAHERGELTLWSSGAVALEYAKCVCRVLELIP-CNGAVGKVRNN 2078

Query: 1839 LLKYVRVREFAPEAEFR-DPCPSFILPNVICSYCNDCRDLDLCRDMALLAQDWHCAMPQC 1897
             ++   +  F+ +++F+ DP  +  L +V CS+CN    +DL      +   + C     
Sbjct: 2079 CMRLCGISPFSAQSQFQADPFLAHRLQSVTCSFCNSHISIDLLVRRKSVTSPFTCTACA- 2137

Query: 1898 GQPYDREVMENALLQIVRQRERLYHLQDLVCIRCNQVKAAHLAEQCACAGSFRCKEDASD 1957
              P     ME  L++ V Q  R+Y+ +D VC +C ++   ++AE   C G+   K  A+ 
Sbjct: 2138 -APIAAASMEGTLVRHVSQLLRVYNQEDFVCTKCREMTTTYVAE--TCCGALVGK--AAP 2192

Query: 1958 FRSKMQIFLNIANRQGFQLLQE 1979
               +++   ++A  QGF  L E
Sbjct: 2193 VEGELRALHHLAKIQGFAWLAE 2214


>gi|261331536|emb|CBH14530.1| DNA polymerase epsilon catalytic subunit,putative [Trypanosoma
           brucei gambiense DAL972]
          Length = 2246

 Score =  597 bits (1538), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 310/653 (47%), Positives = 412/653 (63%), Gaps = 30/653 (4%)

Query: 38  EGDKRLGWLLTFASSSLEDEDT-------RKVYSCIDLYFVSQDGSTFKSKYKFRPYFYA 90
           E   R GWL  +  +S+   ++         V + + L F   +   F+    + PY + 
Sbjct: 18  ESGTRTGWLFNYHPTSVAAPESAFDRHGGSGVRAALVLLFTDHEREVFQVNLFYNPYIFV 77

Query: 91  ATKEKMEMDVEAYLRRRYESQ-IADIEILEKEDLDLKNHLSGLHKSYLKISFDTVQQLMD 149
           +  E  E +VE  +   +  Q I  IEI+EKEDLDL NHLSG  + YLK+SF  VQ L  
Sbjct: 78  SAVEGHEHEVELGMMSLFGPQLICHIEIVEKEDLDLINHLSGRKRLYLKVSFSNVQDLTT 137

Query: 150 VKKDLLHVVERNQAKFDAAE--------AYESILTGKREQRP-------QDFLDCIVDLR 194
           V+  L  +V+RN A   A+         +   ++    E  P       + + D + ++R
Sbjct: 138 VRGRLEKIVKRN-ASMGASNTLLNPLDRSIGDVMAKTFEDDPINSTTASERWFDWVHEIR 196

Query: 195 EYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLLEKRVDLLQRAEV--HVCAFDIETTKLP 252
           EYDV Y +R  ID  V  G WYDV +   G     R DL   A     VCAFDIETTK P
Sbjct: 197 EYDVKYSMRVGIDLGVFVGLWYDVKVHE-GETQLIRCDLNAYAPAMPRVCAFDIETTKAP 255

Query: 253 LKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNVNNEIE 312
           LKFP  + D I MISY+LDG+GYLI+NRE V  DI   EYTPKPE+EG F   N  +E  
Sbjct: 256 LKFPQPEVDQIYMISYVLDGRGYLIVNREIVATDIHQFEYTPKPEYEGIFDTFNEPDEKA 315

Query: 313 LLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDKNQGECRAKF 372
           LL+ +++ M+  +P +YVTYNGDYFD+PF+  R+  H   M EELGF    ++G   A  
Sbjct: 316 LLQRFYSEMRLYQPTVYVTYNGDYFDFPFIHARSLFHHLSMREELGFS-QNSEGAFVANK 374

Query: 373 ACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQMMASYSVS 432
             HLDCF WVKRDSYLPQGSQGLKAVTK KLGY+P+EV+PEDM+  A+  PQ MASYSVS
Sbjct: 375 LVHLDCFYWVKRDSYLPQGSQGLKAVTKYKLGYEPIEVDPEDMLPLAQSNPQQMASYSVS 434

Query: 433 DAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVICPNKHQ 492
           DA++T++LY  YVHPFI+SL+TIIPM+PD+VLRKGSG LCE LLMVQAY  NVI PNK +
Sbjct: 435 DALSTWFLYQKYVHPFIYSLSTIIPMAPDDVLRKGSGGLCESLLMVQAYANNVIFPNKKE 494

Query: 493 SDPEKFYRNHLLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQLLNNLDRDLQYAI 552
              E+F+  HL++SETYIGG VE L SGV+RSD+P  F++    Y++L+++LD  L++++
Sbjct: 495 IKLERFFNGHLIDSETYIGGRVEALRSGVYRSDIPIHFQMSADMYQKLIDDLDDALRFSL 554

Query: 553 KVEGKMDLESVSNYDEVKNAIMEKLLRLQEEPIREECPLIYHLDVAAMYPNIILTNRLQP 612
           +VE  + +  V+NY+E++++I  +L  L++ P +   P+IYHLDV AMYPNIILTNRLQP
Sbjct: 555 EVENSVKMNEVTNYEEIRDSIKARLEVLRDRPSQYATPIIYHLDVGAMYPNIILTNRLQP 614

Query: 613 PSIVTDEVCTACDFNRPGKT--CLRKLEWVWRGEIFMGKRSDYYHLKKQIESE 663
            +I   EVC  C FN P     C R + W W+GE     R +Y  +K Q+E+E
Sbjct: 615 YAIPKAEVCAGCCFNSPTNEHFCKRTMAWKWKGEFLTAGRHEYQRVKAQLENE 667



 Score =  527 bits (1358), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 322/773 (41%), Positives = 442/773 (57%), Gaps = 75/773 (9%)

Query: 674  KSFLDLPKMEQQSRLKDRLKKYCQKAYKRVLDKPVTELREAGICMRENSFYVDTVRSFRD 733
            K++  L +  + + LK RL +Y +KAY ++ +     +R   +C RENSFYVDTVR FRD
Sbjct: 757  KAYYKLQESTKFNMLKKRLAEYSRKAYGKIHESREI-MRSDVVCQRENSFYVDTVRLFRD 815

Query: 734  RRYEYKGLNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHKCILNSFYGYVMRKG 793
            RRYEYK   K WK +L  AK   ++ +I+  +   V  +SLQLAHKCILNSFYGYVMRKG
Sbjct: 816  RRYEYKAALKTWKKRLDNAK---DTEEIKLCKSRCVQMESLQLAHKCILNSFYGYVMRKG 872

Query: 794  ARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLPGSFPENFTFKTKDL 853
            +RWYSMEMAG+VTY GA +IQ AR L+++IG  LELDTDGIWC LP +FPENFTF T + 
Sbjct: 873  SRWYSMEMAGIVTYLGATLIQMARALVQQIGVTLELDTDGIWCCLPNTFPENFTFTTTNP 932

Query: 854  KK-KLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEFEVDGPYKAMILP 912
               K+TISYPC++LN  V    TN QYQT V P    YE  SECSI FEVDGPY AM+LP
Sbjct: 933  STPKVTISYPCIVLNKMVHDGYTNHQYQTCVGP--GLYERRSECSIYFEVDGPYLAMMLP 990

Query: 913  ASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFLHGSTIEECY 972
            AS+EEG  IKKRYAVF+ DG LA+LKGFE+KRRGEL LIK FQ+++F +FL G+T+ E Y
Sbjct: 991  ASREEGKGIKKRYAVFDPDGRLADLKGFELKRRGELMLIKDFQSQVFRRFLDGTTLVESY 1050

Query: 973  SAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLADYGE-QKSCAVTTARRLSD 1031
            ++ A  AN  LD+L ++G+     E+++ +SESS M++ L++Y + QKS A+TTARR+ D
Sbjct: 1051 ASAAVAANVALDMLYSKGEGYDPEEILEKLSESSNMTRRLSEYPDSQKSLALTTARRIGD 1110

Query: 1032 FLGDTMVKDKGLRCQYIVACEPQGTPVSERAVPVAIFETDAEIMKFYLRKWC---KTSSD 1088
            FLG  MVKDKGL CQ++++  P G PV+ERA+P+ IF  D  I   +LRKW      S++
Sbjct: 1111 FLGPQMVKDKGLACQFVISRLPSGRPVTERAIPLTIFRADPAIRTHFLRKWTGDNSISAN 1170

Query: 1089 VGIRSIVDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLYKKVREKEDKFRQR 1148
            V ++ ++DW YY  R ++ +QKIITIPAA+Q+V NPVPRV +PDWL K+V++   +F+Q 
Sbjct: 1171 VDLQHLLDWDYYIARYNACVQKIITIPAALQQVPNPVPRVPYPDWLQKRVQQLNSRFKQT 1230

Query: 1149 KLVDIFSSLKKDDFLNKTCNAETNLMDENVEDLEDFPKKRRNSVNGPRPIVRCFEVNNEQ 1208
             L ++F   K  D      + E  +  + V       K  R   NG   +V   +V   Q
Sbjct: 1231 TLTNMFVKAKPGD--GGVPDVEDLVTGDGVAPSSGGEKDVRRKKNGSAGVVNG-DVYYLQ 1287

Query: 1209 KTVKTTDQVDS-----------LRQQLEPSEVSDQQ--------PSSQNAIDTENIDRIV 1249
            ++  T   V S           L ++ E  E+ D +        P+S + +D        
Sbjct: 1288 ESEGTDSDVASIVNVSDDEGYRLLREAELREIEDVEMLKSKYFAPNSNHPMDAAFFAD-A 1346

Query: 1250 DYKGWLELKKRKW--KDNLDRRKKQKLGSLRASHQANGVSESLGDMINHKEAQRRTGVGS 1307
                WL+L+K+ W  +  L R+  ++  SL A  Q                        S
Sbjct: 1347 RVGAWLKLQKQAWTRRATLRRQMMKESESLTADGQPT---------------------SS 1385

Query: 1308 YFRRQETAMTRCHWQIIQL-VPSSQSGVFLAWVVVEGIMVRIPITVPRLF--------YL 1358
            +F   +T      W I+++    +  G       ++  +      VPR          +L
Sbjct: 1386 HFIDVKTKALSTTWHIMEIRTDKADDGTVAVIAALDKTLYTFRCLVPRRIVVDADHNAFL 1445

Query: 1359 NSKDPIVEKFPGRRVNKTLPHGRRSFNLIEVMIDEDQFRKESKKLAALLADPE 1411
             S  P+            LP  R S NL+ V  D    R+  + L  LL   E
Sbjct: 1446 PSAKPVTNAL-------VLPRSRSSTNLLHV--DLPPGREGERMLNGLLTGRE 1489



 Score =  119 bits (297), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 142/621 (22%), Positives = 245/621 (39%), Gaps = 99/621 (15%)

Query: 1406 LLADPEVEVLGWQQNAAKIGMQRCAASSQWFNERISLARY-------------------- 1445
            LL+DP      W +  A+  +QR  AS  W  ERIS +R                     
Sbjct: 1683 LLSDP----FRWTRLLARRLLQRYCASLLWVEERISFSRLSRIPLCNLMQDTSVHAWDVL 1738

Query: 1446 --------AHILWISDDGVPDLGGTSEEDECFADEVHQPVLTYPGAYRKVSVELKIHHLS 1497
                    AH+LW S D        S   +   +   Q V+  PG Y    VE  +  L 
Sbjct: 1739 FTRALHARAHVLWNSRD-------VSIAFDSIEERPRQVVM--PGGYLSWGVEFSLARLD 1789

Query: 1498 VNALLKSNQVNEMEGGGLFGFDQDMNSGPYNNELCGFDETTSSAPAFRVVKQLIQRCLTD 1557
            V A+L S  + E                P  + LC    TT     F +++ L+   L  
Sbjct: 1790 VVAVLFSQLIQE-------------GDDPNAHALCNQGVTTH----FNILRDLVSDLLGQ 1832

Query: 1558 AVTSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEFRKLGATIIF 1617
              T  N  AD +L    RW+  P S  ++P L  ++  +  +    +L    KLG   + 
Sbjct: 1833 VRT--NAVADVLLASFSRWIRDPVSSCYEPRLLELVSTLAHRALTTVLFSLAKLGGRTVK 1890

Query: 1618 ANFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLFMDQ--YNYG 1675
             +   +++ T K  +    ++   ++ +L+ + +   + L+P+ +W   + +D+  Y + 
Sbjct: 1891 VDGDSIVVLTPKHTIQDTVSFARFMVDSLKDQPMLLLLSLKPIRYWCPFVILDKRDYVFL 1950

Query: 1676 GIPARADESLDDDSQVD-----IVSSWNIAEYLPKEIQDHFVLVVSEFMYIPWKHAQKLA 1730
             + +   +SL +  QV      +  S+ I   LPK+++D  ++ +   +       + +A
Sbjct: 1951 YVTSEGCKSLKEKDQVVLDEMLVEYSFTIWSKLPKKVRDILLVRIEGTL-------RAIA 2003

Query: 1731 ASRASLQEGSSCTPSITVAAAENFESHIVQYVKGEISSYFTGKLLSIVRDAIHHMKKMNN 1790
              R S+       P++ +A        I+  + G       GKL + + + +H + +   
Sbjct: 2004 LERESVLVEVQEDPTVVLATKNE---QILTRIVGVYKKLVEGKLHTELIEEVHDLTE-RK 2059

Query: 1791 DQHNSPGVMQTAANIHKVDAPLEFIKHVCAAFALDQNVQHDVL-VMRKNLLKYVRVREFA 1849
            D H   GV      +      LE+ K VC    L  N    VL  +R N L+   V  F+
Sbjct: 2060 DLHEK-GVPAGETTLTGAAVALEYTKVVCRLLELFPN--DGVLGKVRNNCLRLCGVSPFS 2116

Query: 1850 PEAEFR----DPCPSFILPNVICSYCNDCRDLDLCRDMALLAQDWHCAMPQCGQPYDREV 1905
            P A+        C   +     CS+CN     D+  D+++  +   C    C  P     
Sbjct: 2117 PLAQITADADTDCHQLMFQ---CSFCN----ADVLLDLSIREKRMRCN--GCSAPIFASA 2167

Query: 1906 MENALLQIVRQRERLYHLQDLVCIRCNQVKAAHLAEQCACAGSFRCKEDASDFRSKMQIF 1965
            +E+ L++ V      Y  QD VC +C++V A  + +   C G    K  A    +++Q  
Sbjct: 2168 VESYLVRKVNTLVMSYTNQDFVCGKCHEVTANSINQ--TCCGPLVGK--AKPIHTQLQAL 2223

Query: 1966 LNIANRQGFQLLQECTSWILE 1986
              +A  QGF  L+EC    L+
Sbjct: 2224 KKVAVIQGFAWLEECVETALQ 2244


>gi|71745396|ref|XP_827328.1| DNA polymerase epsilon catalytic subunit [Trypanosoma brucei
           TREU927]
 gi|70831493|gb|EAN76998.1| DNA polymerase epsilon catalytic subunit, putative [Trypanosoma
           brucei brucei strain 927/4 GUTat10.1]
          Length = 2246

 Score =  597 bits (1538), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 310/653 (47%), Positives = 412/653 (63%), Gaps = 30/653 (4%)

Query: 38  EGDKRLGWLLTFASSSLEDEDT-------RKVYSCIDLYFVSQDGSTFKSKYKFRPYFYA 90
           E   R GWL  +  +S+   ++         V + + L F   +   F+    + PY + 
Sbjct: 18  ESGTRTGWLFNYHPTSVAAPESAFDRHGGSGVRAALVLLFTDHEREVFQVNLFYNPYIFV 77

Query: 91  ATKEKMEMDVEAYLRRRYESQ-IADIEILEKEDLDLKNHLSGLHKSYLKISFDTVQQLMD 149
           +  E  E +VE  +   +  Q I  IEI+EKEDLDL NHLSG  + YLK+SF  VQ L  
Sbjct: 78  SAVEGHEHEVELGMMSLFGPQLICHIEIVEKEDLDLINHLSGRKRLYLKVSFSNVQDLTT 137

Query: 150 VKKDLLHVVERNQAKFDAAE--------AYESILTGKREQRP-------QDFLDCIVDLR 194
           V+  L  +V+RN A   A+         +   ++    E  P       + + D + ++R
Sbjct: 138 VRGRLEKIVKRN-ASMGASNTLLNPLDRSIGDVMAKTFEDDPVNSTTASERWFDWVHEIR 196

Query: 195 EYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLLEKRVDLLQRAEV--HVCAFDIETTKLP 252
           EYDV Y +R  ID  V  G WYDV +   G     R DL   A     VCAFDIETTK P
Sbjct: 197 EYDVKYSMRVGIDLGVFVGLWYDVKVHE-GETQLIRCDLNAYAPAMPRVCAFDIETTKAP 255

Query: 253 LKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNVNNEIE 312
           LKFP  + D I MISY+LDG+GYLI+NRE V  DI   EYTPKPE+EG F   N  +E  
Sbjct: 256 LKFPQPEVDQIYMISYVLDGRGYLIVNREIVATDIHQFEYTPKPEYEGIFDTFNEPDEKA 315

Query: 313 LLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDKNQGECRAKF 372
           LL+ +++ M+  +P +YVTYNGDYFD+PF+  R+  H   M EELGF    ++G   A  
Sbjct: 316 LLQRFYSEMRLYQPTVYVTYNGDYFDFPFIHARSLFHHLSMREELGFS-QNSEGAFVANK 374

Query: 373 ACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQMMASYSVS 432
             HLDCF WVKRDSYLPQGSQGLKAVTK KLGY+P+EV+PEDM+  A+  PQ MASYSVS
Sbjct: 375 LVHLDCFYWVKRDSYLPQGSQGLKAVTKYKLGYEPIEVDPEDMLPLAQSNPQQMASYSVS 434

Query: 433 DAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVICPNKHQ 492
           DA++T++LY  YVHPFI+SL+TIIPM+PD+VLRKGSG LCE LLMVQAY  NVI PNK +
Sbjct: 435 DALSTWFLYQKYVHPFIYSLSTIIPMAPDDVLRKGSGGLCESLLMVQAYANNVIFPNKKE 494

Query: 493 SDPEKFYRNHLLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQLLNNLDRDLQYAI 552
              E+F+  HL++SETYIGG VE L SGV+RSD+P  F++    Y++L+++LD  L++++
Sbjct: 495 IKLERFFNGHLIDSETYIGGRVEALRSGVYRSDIPIHFQMSADMYQKLIDDLDDALRFSL 554

Query: 553 KVEGKMDLESVSNYDEVKNAIMEKLLRLQEEPIREECPLIYHLDVAAMYPNIILTNRLQP 612
           +VE  + +  V+NY+E++++I  +L  L++ P +   P+IYHLDV AMYPNIILTNRLQP
Sbjct: 555 EVENSVKMNEVTNYEEIRDSIKARLEVLRDRPSQYATPIIYHLDVGAMYPNIILTNRLQP 614

Query: 613 PSIVTDEVCTACDFNRPGKT--CLRKLEWVWRGEIFMGKRSDYYHLKKQIESE 663
            +I   EVC  C FN P     C R + W W+GE     R +Y  +K Q+E+E
Sbjct: 615 YAIPKAEVCAGCCFNSPTNEHFCKRTMAWKWKGEFLTAGRHEYQRVKAQLENE 667



 Score =  525 bits (1352), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 321/775 (41%), Positives = 441/775 (56%), Gaps = 79/775 (10%)

Query: 674  KSFLDLPKMEQQSRLKDRLKKYCQKAYKRVLDKPVTELREAGICMRENSFYVDTVRSFRD 733
            K++  L +  + + LK RL +Y +KAY ++ +     +R   +C RENSFYVDTVR FRD
Sbjct: 757  KAYYKLQESTKFNMLKKRLAEYSRKAYGKIHESREI-MRSDVVCQRENSFYVDTVRLFRD 815

Query: 734  RRYEYKGLNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHKCILNSFYGYVMRKG 793
            RRYEYK   K WK +L  AK   ++ +I+  +   V  +SLQLAHKCILNSFYGYVMRKG
Sbjct: 816  RRYEYKAALKTWKKRLDNAK---DTEEIKLCKSRCVQMESLQLAHKCILNSFYGYVMRKG 872

Query: 794  ARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLPGSFPENFTFKTKDL 853
            +RWYSMEMAG+VTY GA +IQ AR L+++IG  LELDTDGIWC LP +FPENFTF T + 
Sbjct: 873  SRWYSMEMAGIVTYLGATLIQMARALVQQIGVTLELDTDGIWCCLPNTFPENFTFTTTNP 932

Query: 854  KK-KLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEFEVDGPYKAMILP 912
               K+TISYPC++LN  V    TN QYQT V P    YE  SECSI FEVDGPY AM+LP
Sbjct: 933  STPKVTISYPCIVLNKMVHDGYTNHQYQTCVGP--GLYERRSECSIYFEVDGPYLAMMLP 990

Query: 913  ASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFLHGSTIEECY 972
            AS+EEG  IKKRYAVF+ DG LA+LKGFE+KRRGEL LIK FQ+++F +FL G+T+ E Y
Sbjct: 991  ASREEGKGIKKRYAVFDPDGRLADLKGFELKRRGELMLIKDFQSQVFRRFLDGTTLVESY 1050

Query: 973  SAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLADYGE-QKSCAVTTARRLSD 1031
            ++ A  AN  LD+L ++G+     E+++ +SESS M++ L++Y + QKS A+TTARR+ D
Sbjct: 1051 ASAAVAANVALDMLYSKGEGYDPEEILEKLSESSNMTRRLSEYPDSQKSLALTTARRIGD 1110

Query: 1032 FLGDTMVKDKGLRCQYIVACEPQGTPVSERAVPVAIFETDAEIMKFYLRKWC---KTSSD 1088
            FLG  MVKDKGL CQ++++  P G PV+ERA+P+ IF  D  I   +LRKW      S++
Sbjct: 1111 FLGPQMVKDKGLACQFVISRLPSGRPVTERAIPLTIFRADPAIRTHFLRKWTGDNSISAN 1170

Query: 1089 VGIRSIVDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLYKKVREKEDKFRQR 1148
            V ++ ++DW YY  R ++ +QKIITIPAA+Q+V NPVPRV +PDWL K+V++   +F+Q 
Sbjct: 1171 VDLQHLLDWDYYIARYNACVQKIITIPAALQQVPNPVPRVPYPDWLQKRVQQLNSRFKQT 1230

Query: 1149 KLVDIFSSLKKDDFLNKTCNAETNLMDENVEDLEDFPKKRRNSVNGPRPIVRCFEVNNEQ 1208
             L ++F   K  D      + E  +  + V       K  R   NG   +V   +V   Q
Sbjct: 1231 TLTNMFVKAKPGD--GGVPDVEDLVTGDGVAPSSGGEKDVRRKKNGSAGVVNG-DVYYLQ 1287

Query: 1209 KTVKTTDQVDS-----------LRQQLEPSEVSDQQ--------PSSQNAIDTENIDRIV 1249
            ++  T   V S           L ++ E  E+ D +        P+S + +D        
Sbjct: 1288 ESEGTDSDVASIVNVSDDEGYRLVREAELHEIEDVEMLKSKYFAPNSNHPMDAAFFAD-A 1346

Query: 1250 DYKGWLELKKRKWKDNLDRRKKQKLGSLRASHQANGVSESLGDMINHKEAQRRTGVG--- 1306
                WL+L+K+ W      R++                         KE++  T  G   
Sbjct: 1347 RVGAWLKLQKQAWTRRATLRRQMM-----------------------KESELLTADGQPT 1383

Query: 1307 -SYFRRQETAMTRCHWQIIQL-VPSSQSGVFLAWVVVEGIMVRIPITVPRLF-------- 1356
             S+F   +T      W I+++    +  G       ++  +      VPR          
Sbjct: 1384 SSHFIDVKTKALSTTWHIMEIRTDKADDGTVAVIAALDKTLYTFRCIVPRRIVVDADHNA 1443

Query: 1357 YLNSKDPIVEKFPGRRVNKTLPHGRRSFNLIEVMIDEDQFRKESKKLAALLADPE 1411
            +L S  P+            LP  R S NL+ V  D    R+  + L  LL   E
Sbjct: 1444 FLPSAKPVTNAL-------VLPRSRSSTNLLHV--DLPPGREGERMLNGLLTGRE 1489



 Score =  117 bits (293), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 141/621 (22%), Positives = 245/621 (39%), Gaps = 99/621 (15%)

Query: 1406 LLADPEVEVLGWQQNAAKIGMQRCAASSQWFNERISLARY-------------------- 1445
            LL+DP      W +  A+  +QR  AS  W  ERIS +R                     
Sbjct: 1683 LLSDP----FRWTRLLARRLLQRYCASLLWVEERISFSRLSRIPLCNLMQDTSVHAWDVL 1738

Query: 1446 --------AHILWISDDGVPDLGGTSEEDECFADEVHQPVLTYPGAYRKVSVELKIHHLS 1497
                    AH+LW S D        S   +   +   Q V+  PG Y    VE  +  L 
Sbjct: 1739 FTRALHARAHVLWNSRD-------VSIAFDSIEERPRQVVM--PGGYLSWGVEFSLARLD 1789

Query: 1498 VNALLKSNQVNEMEGGGLFGFDQDMNSGPYNNELCGFDETTSSAPAFRVVKQLIQRCLTD 1557
            V A+L S  + E                P  + LC    TT     F +++ L+   L  
Sbjct: 1790 VVAVLFSQLIQE-------------GDDPNAHALCNQGVTTH----FNILRDLVSDLLGQ 1832

Query: 1558 AVTSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEFRKLGATIIF 1617
              T  N  AD +L    RW+  P S  ++P L  ++  +  +    +L    KLG   + 
Sbjct: 1833 VRT--NAVADVLLASFSRWIRDPVSSCYEPRLLELVSTLAHRALTTVLFSLAKLGGRTVK 1890

Query: 1618 ANFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLFMDQ--YNYG 1675
             +   +++ T K  +    ++   ++ +L+ + +   + L+P+ +W   + +D+  Y + 
Sbjct: 1891 VDGDSIVVLTPKHTIQDTVSFARFMVDSLKDQPMLLLLSLKPIRYWCPFVILDKRDYVFL 1950

Query: 1676 GIPARADESLDDDSQVD-----IVSSWNIAEYLPKEIQDHFVLVVSEFMYIPWKHAQKLA 1730
             + +   +SL +  QV      +  S+ I   LPK+++D  ++ +   +       + +A
Sbjct: 1951 YVTSEGCKSLKEKDQVVLDEMLVEYSFTIWSKLPKKVRDILLVRIEGTL-------RAIA 2003

Query: 1731 ASRASLQEGSSCTPSITVAAAENFESHIVQYVKGEISSYFTGKLLSIVRDAIHHMKKMNN 1790
             +R S+       P++ +A        I+  + G       GKL + + + +H + +   
Sbjct: 2004 LARESVLVEVQEDPTVVLATKNE---QILTRIVGVYKKLVEGKLHTELIEEVHDLTE-RK 2059

Query: 1791 DQHNSPGVMQTAANIHKVDAPLEFIKHVCAAFALDQNVQHDVL-VMRKNLLKYVRVREFA 1849
            D H   G       +      LE+ K VC    L  N    VL  +R N L+   V  F+
Sbjct: 2060 DLHEK-GFPAGETTLTGAAVALEYTKVVCRLLELFPN--DGVLGKVRNNCLRLCGVSPFS 2116

Query: 1850 PEAEFR----DPCPSFILPNVICSYCNDCRDLDLCRDMALLAQDWHCAMPQCGQPYDREV 1905
            P A+        C   +     CS+CN     D+  D+++  +   C    C  P     
Sbjct: 2117 PLAQITADADTDCHQLMFQ---CSFCN----ADVLLDLSIREKRMRCN--GCSAPIFASA 2167

Query: 1906 MENALLQIVRQRERLYHLQDLVCIRCNQVKAAHLAEQCACAGSFRCKEDASDFRSKMQIF 1965
            +E+ L++ V      Y  QD VC +C++V A  + +   C G    K  A    +++Q  
Sbjct: 2168 VESYLVRKVNTLVMSYTKQDFVCGKCHEVTANSINQ--TCCGPLVGK--AKPIHTQLQAL 2223

Query: 1966 LNIANRQGFQLLQECTSWILE 1986
              +A  QGF  L+EC    L+
Sbjct: 2224 KKVAVIQGFAWLEECVETALQ 2244


>gi|340056316|emb|CCC50647.1| DNA polymerase epsilon catalytic subunit,putative, (fragment)
           [Trypanosoma vivax Y486]
          Length = 2224

 Score =  593 bits (1529), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 309/651 (47%), Positives = 410/651 (62%), Gaps = 26/651 (3%)

Query: 38  EGDKRLGWLLTFASSSLEDEDTRKVY-------SCIDLYFVSQDGSTFKSKYKFRPYFYA 90
           E   + GWL  + +++L +  T   +       + + L F   +   F++   + PY + 
Sbjct: 12  ESGSKTGWLFNYHAATLTESKTTAEHQHSHAGRAVLVLLFQDHEREIFQANLFYNPYIFV 71

Query: 91  ATKEKMEMDVEAYLRRRYESQ-IADIEILEKEDLDLKNHLSGLHKSYLKISFDTVQQLMD 149
           +T E  E +VE  +   +  Q I  +EI+EKEDLDL NHLSG  + YLK+ F  VQ L  
Sbjct: 72  STVEGHEHEVELGITSLFGPQLIVSVEIVEKEDLDLVNHLSGRKRLYLKVVFSNVQDLTT 131

Query: 150 VKKDLLHVVERNQA---------KFDAAEAYESILTGKRE-----QRPQDFLDCIVDLRE 195
           V+  L  +V+RN +          FD++       T + E        + ++D + ++RE
Sbjct: 132 VRGQLEKIVKRNASLASSSMLLNSFDSSIGDLMAKTFEEEGFNFNASSERWVDWVQEIRE 191

Query: 196 YDVPYHIRFAIDNDVRCGQWYDVSISSTGPLLEKRVD-LLQRAEVHVCAFDIETTKLPLK 254
           YDV Y++R AID  V  G WYD+++      L +  D     A   VCAFDIETTK PLK
Sbjct: 192 YDVRYYMRVAIDLGVFVGVWYDITVQEGEARLTRCDDSAYPPAMPRVCAFDIETTKAPLK 251

Query: 255 FPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNVNNEIELL 314
           FP  + D I MISY+LDG+GYLIINRE V  DI   EYTPKPE+EG F   N  +E  LL
Sbjct: 252 FPQPEVDQIYMISYVLDGRGYLIINREIVAMDIHQFEYTPKPEYEGVFDTFNEPDEKALL 311

Query: 315 RLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDKNQGECRAKFAC 374
             +++ M+  +P +YVTYNGDYFD+PF+  R+  H   M EE+GF          +K   
Sbjct: 312 ERFYSEMRRYQPNVYVTYNGDYFDFPFIYARSLFHRLSMKEEIGFSQGPEGAFLNSKIP- 370

Query: 375 HLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQMMASYSVSDA 434
           HLDCF WVKRDSYLPQGSQGLK VTK KLGY+P+EV+PE+M+  A+  PQ MASYSVSDA
Sbjct: 371 HLDCFYWVKRDSYLPQGSQGLKEVTKHKLGYEPIEVDPEEMLPLAQSNPQQMASYSVSDA 430

Query: 435 VATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVICPNKHQSD 494
           ++T++LY  Y+HPFIFSLATIIPM PD+VLRKGSG LCE LLMVQAY  NVI PNK +  
Sbjct: 431 LSTWFLYQKYIHPFIFSLATIIPMPPDDVLRKGSGGLCESLLMVQAYANNVIFPNKKEQQ 490

Query: 495 PEKFYRNHLLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQLLNNLDRDLQYAIKV 554
            EKF+  HL++SETYIGG VE L SGV+RSD+P  F +    Y++L+++LD  L++AI+V
Sbjct: 491 LEKFFNGHLIDSETYIGGRVEALCSGVYRSDIPLHFNMSSDRYQKLIDDLDSALRFAIEV 550

Query: 555 EGKMDLESVSNYDEVKNAIMEKLLRLQEEPIREECPLIYHLDVAAMYPNIILTNRLQPPS 614
           E  + +E V+NY EV ++I  KL  L++ P ++  P+IYHLDV AMYPNIILTNRLQP +
Sbjct: 551 ENGVRVEEVTNYKEVHDSIKAKLECLRDNPSQKANPIIYHLDVGAMYPNIILTNRLQPYA 610

Query: 615 IVTDEVCTACDFNRPGK--TCLRKLEWVWRGEIFMGKRSDYYHLKKQIESE 663
           I   + C  C FN P     C R + W WRGE     R +Y  +K Q+E+E
Sbjct: 611 IPKPDTCARCCFNSPTNEHMCKRMMSWKWRGEYLTAGRHEYERVKAQLENE 661



 Score =  514 bits (1324), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 273/523 (52%), Positives = 359/523 (68%), Gaps = 31/523 (5%)

Query: 666  DGTNGHLSKSFLDLPKMEQQSRLKDRLKKYCQKAYKRVLDKPVTELREAGICMRENSFYV 725
            +  N  LSK F           LK RL +Y +KAY ++ +     ++   +C RENSFYV
Sbjct: 729  EARNALLSKEF---------DMLKKRLAEYSRKAYGKIHESREI-IQNDVVCQRENSFYV 778

Query: 726  DTVRSFRDRRYEYKGLNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHKCILNSF 785
            DTVR FRDRRYEYK   K WK +L  AK   ++ +++  +   V  +SLQLAHKCILNSF
Sbjct: 779  DTVRLFRDRRYEYKAALKEWKKRLEGAK---DTDEVKMCRSRCVQMESLQLAHKCILNSF 835

Query: 786  YGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLPGSFPEN 845
            YGYVMRKG+RWYSMEMAG+VTY GA +IQ AR L+++IG  LELDTDGIWC LP  FPEN
Sbjct: 836  YGYVMRKGSRWYSMEMAGIVTYLGATLIQMARSLVQQIGVTLELDTDGIWCCLPKDFPEN 895

Query: 846  FTFKTKDLKK-KLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEFEVDG 904
            F F T + K  ++TISYPC++LN  V  + TN QYQT V P    YE  SECSI FEVDG
Sbjct: 896  FVFTTSNAKAARITISYPCIVLNKMVHDDYTNHQYQTCVAP--GVYERRSECSIYFEVDG 953

Query: 905  PYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFLH 964
            PY AM+LPAS+EEG  IKKRYAVFN DG LAELKGFE+KRRGEL LIK FQ+++F +FL 
Sbjct: 954  PYLAMLLPASREEGKSIKKRYAVFNPDGRLAELKGFELKRRGELMLIKDFQSQVFRRFLE 1013

Query: 965  GSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLADY-GEQKSCAV 1023
            GS++ E Y++ A VAN  LD+L ++G+     E+++ +SESS M++ L++Y   QKS A+
Sbjct: 1014 GSSLVESYASAAVVANVALDMLYSKGEGYEMEEVLEKLSESSNMTRRLSEYPSSQKSLAL 1073

Query: 1024 TTARRLSDFLGDTMVKDKGLRCQYIVACEPQGTPVSERAVPVAIFETDAEIMKFYLRKWC 1083
            TTARR+++FLG  MVKDKGL C ++++  P G PV+ERA+P+ IF  D  +   +LRKW 
Sbjct: 1074 TTARRIAEFLGPQMVKDKGLACHFVISRLPLGRPVTERAIPLTIFRADPTVRTHFLRKWT 1133

Query: 1084 KTSS---DVGIRSIVDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLYKKVRE 1140
              +S   ++ ++ ++DW YY  R ++ +QKIITIPAA+Q+V NPVPRV +PDWL K+V++
Sbjct: 1134 GDNSLPVELDLQQLLDWDYYITRFNACVQKIITIPAALQQVQNPVPRVPYPDWLQKRVQQ 1193

Query: 1141 KEDKFRQRKLVDIFSSLKKDDFLNKTCNAETNLMDENVEDLED 1183
               KFRQ  L  +F          K    E +++D  VEDL +
Sbjct: 1194 LNSKFRQTSLTSLFV---------KANTRENSILD--VEDLAE 1225



 Score =  124 bits (311), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 137/621 (22%), Positives = 247/621 (39%), Gaps = 96/621 (15%)

Query: 1406 LLADPEVEVLGWQQNAAKIGMQRCAASSQWFNERISLARYA------------------- 1446
            LLADP      W +  A+  +QR  AS  W  ERI+ +R +                   
Sbjct: 1660 LLADP----FRWTRLLARRLLQRYCASILWVEERIAFSRLSGIPLCNLAQDTSVHAWDVL 1715

Query: 1447 ---------HILWISDDGVPDLGGTSEEDECFADEVHQPVLTYPGAYRKVSVELKIHHLS 1497
                     HI+W S D        S   +   +   Q V+  PG Y   SVE  +  L 
Sbjct: 1716 FTRSLHSRGHIMWNSQD-------VSIAFDAVEERPRQVVM--PGGYFSWSVEFSLARLD 1766

Query: 1498 VNALLKSNQVNEMEGGGLFGFDQDMNSGPYNNELCGFDETTSSAPAFRVVKQLIQRCLTD 1557
            V A+L S  + E                P  + LC    T+     F +++ ++   L  
Sbjct: 1767 VVAVLFSQMIRE-------------GDDPNAHTLCHQGVTSH----FNILRDVVSDLLGQ 1809

Query: 1558 AVTSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEFRKLGATIIF 1617
                G+  AD +L    RW+  P S  ++P L  ++  +  +    +L    KLG   + 
Sbjct: 1810 --VKGSSVADVLLASFSRWIRDPVSSSYEPRLLELVSHLAHRALTAVLVRLAKLGGKTVK 1867

Query: 1618 ANFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLFMDQYNYGGI 1677
             +   +++ T K  +  A ++   ++ +L+ + +   + L+PV FW  L+ +D+ ++  +
Sbjct: 1868 VDGDSIVVLTPKHSIQDAMSFARFMVDSLKDQPMLLLLSLQPVRFWCPLVILDRCDFACM 1927

Query: 1678 PARA-------DESLDDDSQVDIVSSWNIAEYLPKEIQDHFVLVVSEFMYIPWKHAQKLA 1730
              R+       + S    S + +  S  +    PK+++D F+  +   +       Q +A
Sbjct: 1928 ALRSEVAATLHESSSAPASLMRVEHSITLCNKFPKKVRDIFLKRIEGTL-------QLIA 1980

Query: 1731 ASRASLQEGSSCTPSITVAAAENFESHIVQYVKGEISSYFTGKLLSIVRDAIHHMKKMNN 1790
              R ++       P+I +A        I++ +     +   G+L + + + +H + +   
Sbjct: 1981 ECRDTILSEVRSDPAIVLATKNE---QILERISNAFKALVEGRLHTELIEEVHDLME-RR 2036

Query: 1791 DQHNSPGVMQTAANIHKVDAPLEFIKHVCAAFALDQNVQHDVLVMRKNLLKYVRVREFAP 1850
            D +    +   A  +      LEF K +C    L  +    V  +R N L+   V  F+P
Sbjct: 2037 DLYEDSDLPAGAVQMSSAALGLEFTKAICCFLELFHS-DGAVGKLRNNCLRLCGVSPFSP 2095

Query: 1851 EAE----FRDPCPSFILPNVICSYCNDCRDLDLCRDMALLAQDWHCAMPQCGQPYDREVM 1906
             A+      + C + +   V CS+CN     D+  D+   A++ H     C  P     +
Sbjct: 2096 LAQNTPDVFNECRALM---VRCSFCN----FDILLDLG--ARERHLRCDGCHAPISSTAL 2146

Query: 1907 ENALLQIVRQRERLYHLQDLVCIRCNQVKAAHLAEQCACAGSFRCKEDASDFRSKMQIFL 1966
            E+ L++ V      Y  QD +C +C +V A  ++++  C G    K  A     ++Q   
Sbjct: 2147 ESHLVRRVNALVANYTKQDFICTKCREVTADVISQR--CCGPLVGK--ARPIEPQLQAIK 2202

Query: 1967 NIANRQGFQLLQECTSWILEV 1987
             IA  QGF  L EC    L +
Sbjct: 2203 KIAGVQGFAWLAECVDAALRL 2223


>gi|341897451|gb|EGT53386.1| hypothetical protein CAEBREN_30894 [Caenorhabditis brenneri]
          Length = 1511

 Score =  573 bits (1478), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 330/770 (42%), Positives = 444/770 (57%), Gaps = 104/770 (13%)

Query: 679  LPKMEQQSRLKDRLKKYCQKAYKRV-LDKPVTELREAGICMRENSFYVDTVRSFRDRRYE 737
            L + E+++    R+K YC++ Y +  L K   E+RE  IC REN FYV+TV++FRDRRYE
Sbjct: 2    LERSEREAIEMKRVKDYCRRVYGKTHLTK--LEMRETTICQRENHFYVETVKAFRDRRYE 59

Query: 738  YKGLNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHKCILNSFYGYVMRKGARWY 797
            YK + K  KG+  +A    +   +  ++  +VL++SLQLAHKCILNSFYGYVMRKG+RW+
Sbjct: 60   YKDMLKKAKGRFDKAVVENDLSTVATSKLEMVLFESLQLAHKCILNSFYGYVMRKGSRWF 119

Query: 798  SMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLPGSFPENFTFKTKDLKK-K 856
            SMEMAG+V +TGA II+ AR L++KIGKPLELDTDGIWC++P SFPEN TFK K+ K+  
Sbjct: 120  SMEMAGIVCHTGANIIREARKLVDKIGKPLELDTDGIWCLIPASFPENVTFKLKNHKRSS 179

Query: 857  LTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEFEVDGPYKAMILPASKE 916
            +T+SYP  MLN  V    TN QY TL    S  Y   SE SI FEVDGPY+ MILPASKE
Sbjct: 180  VTVSYPGAMLNALVYEGFTNHQYHTLEKDGS--YSKSSENSIYFEVDGPYQCMILPASKE 237

Query: 917  EGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFD---------------- 960
            EG  +KKRYAVFN DG+LAE+KGFE+KRRGEL +IK FQ  LFD                
Sbjct: 238  EGKKLKKRYAVFNLDGSLAEMKGFELKRRGELNIIKHFQVNLFDFTQKYGSHPENLKATV 297

Query: 961  ----------------KFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISE 1004
                             FL+G T++E Y AVA  AN WLD+L + G D+ D EL D ISE
Sbjct: 298  SGTISKFSFFQGSVFKTFLNGKTLDEVYKAVAGDANHWLDILHSHGSDLTDEELFDLISE 357

Query: 1005 SSTMSKSLADYGEQKSCAVTTARRLSDFLGDTMVKDKGLRCQYIVACEPQGTPVSERAVP 1064
            + +MS+ L +YG QKS +++TA+RL++FLGD MVKD GL C +I++  P G PV+ERA+P
Sbjct: 358  NRSMSRKLEEYGAQKSTSISTAKRLAEFLGDDMVKDAGLACMFIISKHPIGAPVTERAIP 417

Query: 1065 VAIFETDAEIMKFYLRKWCKTS---SDVGIRSIVDWSYYKQRLSSAIQKIITIPAAMQKV 1121
            VAIF+ D++I   Y+RKW K +    D  IR ++DW YY +R  S IQKIITIPAA+Q +
Sbjct: 418  VAIFKADSKIRSHYVRKWTKQTDFDEDTDIRDMLDWDYYIERFGSCIQKIITIPAALQGI 477

Query: 1122 SNPVPRVVHPDWLYKKVREKEDKFRQRKLVDIFSSLKK--------DDFLNKTCNAETNL 1173
            SNPVPRV HPDWL  K+R K +  +Q  +  IF+  +K           L      E   
Sbjct: 478  SNPVPRVAHPDWLQNKIRNKFEAHKQPLINQIFAKCQKPAAPANMNGKRLRSPLEGEDGD 537

Query: 1174 MDENVEDLEDFPKKRRNSVNGPRPIVRCFEVNNEQKTVKTTDQVDSLRQQLEPSEVSDQQ 1233
             D+ VE LED  + + N  +  RP           K+ K+        Q  EP  V +++
Sbjct: 538  SDD-VEILEDDGEDKENGSHAKRP-----------KSGKSAQS-----QAPEPP-VLEKK 579

Query: 1234 PSSQNAIDTENIDRIVDYKGWLELKKRKWKDNLDRRKKQKLGSLRASHQANGVSESLGDM 1293
              + +  D+           WL   K+KWK     RK QKL    AS  ++ VS      
Sbjct: 580  TLTDHGFDS-----------WLGFLKQKWKIQRKERKAQKL----ASRDSDAVS------ 618

Query: 1294 INHKEAQRRTGVGSYFRRQETAMTRCHWQIIQLVPSSQSGVFLAWVVVEGIMVRIPITVP 1353
                         +  R    A +   W I+ + P++ +  +  W+  +G M ++ + + 
Sbjct: 619  -------------AIVRGAREAESEREWHILSIEPTADASFYNIWISTQGQMHKVTMKIG 665

Query: 1354 RLFYLNSKDPIVEKFPGRRVNKTLPHGRRSFNLIEVMIDEDQFRKESKKL 1403
            R   ++S+ P  ++   RR+   LPH +    L E   DE Q      KL
Sbjct: 666  RKILVDSRAPRGDRDTVRRI---LPHHKPPGFLYEFKTDEAQLTALMDKL 712



 Score =  150 bits (380), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 144/590 (24%), Positives = 252/590 (42%), Gaps = 92/590 (15%)

Query: 1442 LARYAHILWISDDGVPDLGGTSEEDECFADE-----VHQPVLTYPGAYRKVS-VELKIHH 1495
            L +  H LW +    PDLGG   +D   + +     V   VL    A+   + VEL++  
Sbjct: 969  LQKSGHALWATKSSRPDLGGKELDDIRLSIDWNPLSVDDTVLLNREAFCDTACVELQLSA 1028

Query: 1496 LSVNALLKSNQVNEMEGGG-LFGFD------QDMNSGPYNNELCGFDETTSSAPAFRVVK 1548
            ++V AL++ ++V E EG   +  FD      Q   +G   +  C +DE  +   + +++K
Sbjct: 1029 VAVTALVQRSRVLEAEGADDVVTFDSMSTIAQQSITGAGQSIAC-YDEGAAVDASIKILK 1087

Query: 1549 QLIQRCLTDAVTSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEF 1608
            Q++  C+      GN  AD ++  + RWL +  + L D  L R +  +  K+  +L AE 
Sbjct: 1088 QMLTECVRHIAHQGNRHADEVVMTVSRWLNTRSALLFDSALTRSISVLESKLVLLLCAEC 1147

Query: 1609 RKLGATIIFANFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLF 1668
             ++GA +I A   K++++TGK     AK + + L+++L T  +F  + + PV F+ S+L+
Sbjct: 1148 ERIGAKVIHATAQKLVLNTGKTTSEEAKGFVEMLIQSLSTNVVFAALHITPVKFFDSMLW 1207

Query: 1669 MDQYNYGGI---PARADES---LDDD--------------SQVDIVSSWNIAEYLPKE-- 1706
            MD +N+ GI   P    ES   LDD+              +Q +  + W IAE +P E  
Sbjct: 1208 MDAHNHTGIRIVPQDEMESPDVLDDEPTTSSSSSQPQSQQNQYETTAIWKIAEEMPTESH 1267

Query: 1707 IQDHFVLVVSEFMYIPWKHAQKLAASRASLQEGSSCTPSITVAAAENFESHIVQYVKGEI 1766
            I+D F+ +V  F+       + L  +R    +  S            F S +       I
Sbjct: 1268 IRDEFLQMVGAFIL------EFLETNREMQFDPES---------GATFRSDL-------I 1305

Query: 1767 SSYFTGKLLSIVRDAIHHMKKMNNDQHNSPGVMQTAANIHKVDAPLEFIKHVCAAFALDQ 1826
            S   + +L  IV   +H+                   N       +  +  +C A + DQ
Sbjct: 1306 SQKISHRLYRIVNKLVHN-------------------NAESAHCAVYLVNALCRALSCDQ 1346

Query: 1827 NVQHDVLVMRKN--------LLKYVRVREFAPEAEFRDPCPSFILPNVICSYCNDCRDLD 1878
              Q  V  +R N        + K VR+R  A     R    +  + NV C+ C+   ++ 
Sbjct: 1347 TAQLAVEGVRDNAKRLLHNVVGKLVRLRLEADMTPLRST--TLFVSNVFCTSCSQASNVF 1404

Query: 1879 LCRDMALLAQDWHCAMPQ-CGQPYDREVMENALLQIVRQRERLYHLQDLVCIRCNQVKAA 1937
            L     +L     C+  Q      + + ++  +   + Q    Y +QD  C +C  V+  
Sbjct: 1405 LSSTDEILT----CSTCQDVSFKLNSDNIDMMICDRLNQLLTAYQIQDHQCTKCKSVRHD 1460

Query: 1938 HLAEQCACAGSFRCKEDASDFRSKMQIFLNIANRQGFQLLQECTSWILEV 1987
            +L+  C C   F  +   S  + +      +A+ + F L  E  +WIL++
Sbjct: 1461 NLSMYCECCSQFVPQITPSQLKHEASTVETVASVRNFVLSAELATWILKM 1510


>gi|313240246|emb|CBY32592.1| unnamed protein product [Oikopleura dioica]
          Length = 576

 Score =  545 bits (1403), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 274/564 (48%), Positives = 377/564 (66%), Gaps = 14/564 (2%)

Query: 2   DRRRWDRQDGRRTKKQKLIR-SAEEELEAKLGYDLFSEGDKRLGWLLTFASSSLEDEDTR 60
           D    ++      K Q++ + + E EL+   GY    E     GWL+   +    +E+  
Sbjct: 12  DNENEEKPSTSSAKSQRIEKLTQENELDELYGYQEPEEPGVSTGWLVNMHAGDTINEEGH 71

Query: 61  KVYSCIDLYFVSQDGSTFKSKYKFRPYFYAATKEKMEMDVEAYLRRRYESQI-ADIEILE 119
            V SC+  YF+ QDG  FK +  ++PYFY   +  +E ++  Y+ RR+E  +   +E++ 
Sbjct: 72  LV-SCVHYYFIKQDGERFKVRLTYQPYFYIEPRLGLEHEIANYVSRRFEKMVNVKVELVA 130

Query: 120 KEDLDLKNHLSGLHKSYLKISFDTVQQLMDVKKDLLHVVERNQAKFDAAEAYESI--LTG 177
           KEDLDL NHLSGL ++++K++FD V  +  V K L   V RN+ K    +A + +  L G
Sbjct: 131 KEDLDLNNHLSGLKRNFVKLTFDHVDDMQIVLKPLRMAVARNK-KLAENKASDLVMALDG 189

Query: 178 KREQRPQDFLDCIVDLREYDVPYHIRFAIDNDVRCGQWYDVSISSTG--PLLEKRVDLLQ 235
            ++    D +D IVD+REYDVP+H+R +ID  +    WYDV+ +     P  ++R DLL 
Sbjct: 190 DQDAVSSDMMDEIVDMREYDVPFHVRVSIDKQIFVAHWYDVNWTGQHEIPTFKRRDDLLT 249

Query: 236 RAEVHVCAFDIETTKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPK 295
           R +  V A+DIETTKLPLKFP+++ D IMMISYM+DGQGYLI NR  +  D+ED E+TP+
Sbjct: 250 RPDPVVLAYDIETTKLPLKFPNSEIDHIMMISYMVDGQGYLINNRAILSADVEDFEFTPR 309

Query: 296 PEFEGYFKVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSE 355
           PEFEG F V N  +E   +R +F H+QE+KP + VTYNGD+FDWPF++ RA  HG  M  
Sbjct: 310 PEFEGPFIVYNEEDEFATIRKFFDHIQELKPHVIVTYNGDFFDWPFVDDRAKIHGLSMKR 369

Query: 356 ELGFQCDKNQGE----CRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVN 411
           E+GF+ + + G+    CR     H+D + WVKRDSYLP GSQGLKA  KAKL +DP+E++
Sbjct: 370 EIGFERETHGGDDTFLCRQ--CLHMDAYKWVKRDSYLPVGSQGLKAAAKAKLRFDPVELD 427

Query: 412 PEDMVRFAKEKPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTL 471
           PE M + A E+PQ++A+YSVSDA+ATYYLY  YVHPFIF+L  IIPM PDEVLRKGSGTL
Sbjct: 428 PELMCKMACEQPQVLATYSVSDALATYYLYQKYVHPFIFALCMIIPMEPDEVLRKGSGTL 487

Query: 472 CEMLLMVQAYKANVICPNKHQSDPEKFYRNHLLESETYIGGHVECLESGVFRSDLPTSFK 531
           CE LLM  AYKANVI PNK Q++ +K +  HLLESETY+GG VE +E GVFR+D P  F+
Sbjct: 488 CEALLMDYAYKANVIYPNKQQTNMDKTFEGHLLESETYVGGRVEAIECGVFRADFPEKFR 547

Query: 532 LDPSAYEQLLNNLDRDLQYAIKVE 555
           LDP AY+ LL+ +D  ++++++ E
Sbjct: 548 LDPDAYQALLDAVDETMKFSLEKE 571


>gi|312097554|ref|XP_003149012.1| DNA polymerase epsilon catalytic subunit [Loa loa]
          Length = 481

 Score =  509 bits (1311), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 250/480 (52%), Positives = 338/480 (70%), Gaps = 10/480 (2%)

Query: 56  DEDTRKVYSCIDLYFVSQDGSTFKSKYKFRPYFYAATKEKMEMDVEAYLRRRYESQIADI 115
           DE T+ + +  D YF+ +DG  FK  Y FRPY Y AT    E  V +YL ++Y S I   
Sbjct: 3   DEQTKNIIAVCDFYFLEEDGGRFKISYPFRPYLYIATLPSFEHQVLSYLSKKYTSVIT-T 61

Query: 116 EILEKEDLDLKNHLSGLHKSYLKISFDTVQQLMDVKKDLLHVVERNQAKFDAAEAYESIL 175
           +I+EKEDLDLKNHL+GL ++YLKISF ++ +L+  KKD++ ++ RNQ +     +Y ++L
Sbjct: 62  DIVEKEDLDLKNHLAGLKRTYLKISFPSLSELLKFKKDIMPILRRNQEREKQTTSYTNLL 121

Query: 176 T---GKREQRPQD--FLDCIVDLREYDVPYHIRFAIDNDVRCGQWYDVSISSTG--PLLE 228
           T   G RE    +   L+ I+DLRE+D+PY +R  ID +V  G WY V+       P + 
Sbjct: 122 TRHFGPREVLFDEGGVLEKIIDLREHDLPYQMRVCIDMEVFVGLWYRVTGRDFDRRPKIT 181

Query: 229 KRVDLLQRAEVHVCAFDIETTKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIE 288
           +   L+   E  + A+DIE TKLPLKFPD+ +D IMMISYM++G G+LIINR+ +  D++
Sbjct: 182 RHPTLIDPPEPIILAYDIEVTKLPLKFPDSTFDEIMMISYMVNGNGFLIINRQIISTDVD 241

Query: 289 DLEYTPKPEFEGYFKVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAH 348
           D EYTPKPE++G F+V N+ +E  +++ +F H+  ++P ++VTYNGD FDWPF+E RAA 
Sbjct: 242 DFEYTPKPEYKGIFRVINLPDEKAVIKYFFDHIIRLRPSVFVTYNGDSFDWPFVEARAAV 301

Query: 349 HGFKMSEELGFQCDKNQGECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPL 408
           HG  M  E+G     + GE R   A HLD F WVKRDSYLP GSQ LK+ TKAKL YDP+
Sbjct: 302 HGLNMLTEIGVS-KNSSGEYRTTNAVHLDAFRWVKRDSYLPVGSQNLKSCTKAKLRYDPV 360

Query: 409 EVNPEDMVRFAKEKPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGS 468
           E++PE+M   AK++PQ +A+YSVSDAVATYYLY+ YVHPFIF+L TIIP+ PD+VLRKGS
Sbjct: 361 ELDPEEMCAMAKDEPQTLANYSVSDAVATYYLYIKYVHPFIFALCTIIPLGPDDVLRKGS 420

Query: 469 GTLCEMLLMVQAYKANVICPNKHQSDPEKFYRN-HLLESETYIGGHVECLESGVFRSDLP 527
           GTLCE LLMV+A+  N+I PNK      K+  + H++ESETY+GG+VE LESGVFR+D+P
Sbjct: 421 GTLCEALLMVKAFHNNIIFPNKSLPYGAKYASDGHVIESETYVGGYVEALESGVFRADIP 480


>gi|253747076|gb|EET01966.1| DNA polymerase epsilon, catalytic subunit [Giardia intestinalis ATCC
            50581]
          Length = 2580

 Score =  494 bits (1272), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 283/672 (42%), Positives = 386/672 (57%), Gaps = 101/672 (15%)

Query: 564  SNYDEVKNAIMEKLLRLQEEPIREECPLIYHLDVAAMYPNIILTNRLQPPSIV-TDEVCT 622
            SNY +V+N I+E L+           PL+YHLDVAAMYPNI+LTN+LQP +IV    +C 
Sbjct: 691  SNYSKVRNTIIEGLITCSS--TVHSKPLLYHLDVAAMYPNIMLTNKLQPTAIVEPSTMCA 748

Query: 623  ACDFN--RPGKTCLRKLEWVWRGEIFMGKRSDYYHLKKQIESEFVDGTNGHLSKSFLDLP 680
            +CDF+  +  + C R +EW WRG  +    S+Y  +K Q  S+  +    H       L 
Sbjct: 749  SCDFSTVKEAQVCQRVMEWDWRGSYYPLDFSEYLMIKNQTISQVGNDKWTH------TLT 802

Query: 681  KMEQQSRLKDRLKKYCQKAYKRVLDKPVTELREAGI-CMRENSFYVDTVRSFRDRRYEYK 739
            + E+   L +RL+ Y +  YK  L +   ELR   I C RENSF++DTVR FRDRRY +K
Sbjct: 803  EAEKARLLHERLETYSKSQYK--LKQKTEELRRKTIVCQRENSFFIDTVRKFRDRRYRFK 860

Query: 740  GLNKVWKGKLSEAKA------------SGNSIKIQEAQD----MVVLYDSLQLAHKCILN 783
            G  K    KLS+AKA            SG    ++   D    ++VL +SLQLAHKCILN
Sbjct: 861  GEQKEHSAKLSKAKAQLAKLIEAGEEASGEVQNLRREVDSQTGLIVLKESLQLAHKCILN 920

Query: 784  SFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLPGSFP 843
            SFYGY MRKG+RWYS+EMA  VT+ GA II+ AR LIE IG  LELDTDGIWC LP +FP
Sbjct: 921  SFYGYAMRKGSRWYSLEMAAAVTHAGANIIKRARTLIEMIGFVLELDTDGIWCCLPSAFP 980

Query: 844  ENFTFKTKD-------LKKKLTISYPCVMLN-------------VDVARN---------- 873
            E FTF   D       + +K++ SYP  +LN             V+V RN          
Sbjct: 981  ETFTFIVIDPTNGDAKVSRKVSFSYPGTILNALTQTQNTNKQYLVNVLRNKNSPSHDSDV 1040

Query: 874  ---------------NTNDQYQTLVDPVS---------------------KTYETHSECS 897
                           ++ND    L  P                       K ++  +EC+
Sbjct: 1041 LLAHNKSARETFSGFDSNDMSLLLYRPSLSKDSLSVKGAFSSSNQAESSLKAWKRINECT 1100

Query: 898  IEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAE 957
            IEFEVDGPY  M+L A++EEG+ IKK+YAVF+  G L+ELKGFE+KRRGELK+IK FQ  
Sbjct: 1101 IEFEVDGPYSCMVLSAAREEGVRIKKKYAVFDLAGNLSELKGFELKRRGELKIIKSFQTR 1160

Query: 958  LFDKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSL-ADYG 1016
            +F +FL G ++ + YS  A +AN +LD++  +G  + D +LI  ISE+ST+  SL +   
Sbjct: 1161 VFSQFLKGESLNDAYSHAAKIANTYLDIIYARGSFLTDQQLISLISEASTLKNSLNSTPK 1220

Query: 1017 EQKSCAVTTARRLSDFLGDTMVKDKGLRCQYIVACEPQGTPVSERAVPVAIFETDAEIMK 1076
             +KS ++T ARR++ FL        GL  +YI++  P+GTPVSERAVP+ IF +   I  
Sbjct: 1221 NRKSTSITCARRMASFLDPLFASVDGLSVEYIISRLPEGTPVSERAVPIQIFSSPDYIRY 1280

Query: 1077 FYLRKWC---KTSSDVGIRSIVDWSYYKQRLSSAIQKIITIPAAMQKV-SNPVPRVVHPD 1132
             +LR+W    KT +   IR ++DW+YY  RLS AI KII +P+ +Q + ++P+ R+  PD
Sbjct: 1281 KFLRQWVGDHKTDNITDIRELIDWNYYLTRLSGAIYKIIIVPSGLQGIATSPIQRIAFPD 1340

Query: 1133 WLYKKVREKEDK 1144
            WL +   +  +K
Sbjct: 1341 WLVQSQNQSSNK 1352



 Score =  411 bits (1056), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 247/638 (38%), Positives = 362/638 (56%), Gaps = 64/638 (10%)

Query: 3   RRRWDR-QDGRRTKKQKLIRSAEEELEAKLG-YDLFSEGDKRLGWLLTF---------AS 51
           RR  D+ Q G    K++L+  A E  +A  G Y L   G  + GWL            A 
Sbjct: 4   RRPKDQVQTGTEQMKEQLL--AIERADAIYGCYRLTIPGTYQ-GWLYNVYETVFFGDPAE 60

Query: 52  SSLEDEDTRKVYSCIDLYFVSQDGSTFKSKYKFRPYFYAATKEKMEMDVEAYLRRRYESQ 111
           + +       VY+ ++ YF++     FK+    +PYFY     +    ++  +  +Y   
Sbjct: 61  ARMSSAQGTPVYAAVECYFMTAGLELFKAVVPVKPYFYIQAPVENYTFIQERIFLQYPDL 120

Query: 112 IADIEILEKEDLDLKNHLSGLHKSYLKISFDTVQQLMDVKKDLLHVVERNQAKFDAAEAY 171
             ++ ++E+ DL ++NH++    ++L++SF+ +  L  V   LL ++ R +     ++ Y
Sbjct: 121 HINMTLVERNDLSVQNHIANEGIAHLRLSFNNLTDLRTVSATLLGLL-RQKELSTVSDIY 179

Query: 172 ESILTGKREQRP-----------QDFLDCIVDLREYDVPYHIRFAIDNDVRCGQWYDVSI 220
               TG     P           +  +D I ++ E+DV    RF IDN++    WY V++
Sbjct: 180 NK--TGTARITPHTDTKSIPRTLKSLVDYIGNVLEHDVNLTARFLIDNNLTMSTWYKVTV 237

Query: 221 SSTGPLLEK-RVDLLQRAEVH------VCAFDIETTKLPLKFPDADY-DIIMMISYMLDG 272
               P LE   ++ L+  E        V A+DIETTK PL+FP+A+  D IM ISYM D 
Sbjct: 238 R---PELEPPSLERLEGGEFELPPVPKVLAYDIETTKKPLRFPNAEAGDQIMCISYMFDD 294

Query: 273 QGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNVNNEIELLRLWFAHMQEVKPGIYVTY 332
           QGYL+INR     DI D EYTPKPEF G F   N+  E +LL  +F H++  +P I+ T+
Sbjct: 295 QGYLLINRSIFSRDITDFEYTPKPEFPGKFACFNLPTEKDLLVFFFTHIRTARPNIFATF 354

Query: 333 NGDYFDWPFLETRAAHHGFKMSEELGFQCDKNQGEC-------RAKFACHLDCFAWVKRD 385
           NGD+FDWPF++ RAA +G  + +E+G    +++           A+   HLDCF WV+RD
Sbjct: 355 NGDFFDWPFVDVRAASYGMNLLDEIGVLKSESRSRAGLVEKQYYARAVPHLDCFRWVRRD 414

Query: 386 SYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQMMASYSVSDAVATYYLYMTYV 445
           SYLPQGSQGLKAVT+AKL Y P E++PE MV +A+  PQ++ASYSVSDAVATYYLY  YV
Sbjct: 415 SYLPQGSQGLKAVTRAKLKYHPDELSPELMVSYAQTDPQVLASYSVSDAVATYYLYRKYV 474

Query: 446 HPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVICPNKHQSDP------EKFY 499
           HPFIF+L TI+P++PD++LR+G+GTLCE LLMV+AY+ANV  PNKH +DP      +   
Sbjct: 475 HPFIFALGTILPLNPDDILRRGTGTLCEHLLMVEAYQANVPFPNKH-NDPLLQVVLDANK 533

Query: 500 RNHLLESETYIGGHVECLESGVFRSDLPTSFKLDPSA--------YEQLLNNLDRDLQYA 551
              +L S+TY+GG VE + +GV+R+D+   F    +A        Y  LL  +DRDL   
Sbjct: 534 EKRILLSQTYVGGKVEAINAGVYRNDIAYDFGYYSAAFKTKRSEGYGHLLRYIDRDLVIQ 593

Query: 552 IKVEGKMDLESVSNYDEVKNAIMEKLLRLQEEPIREEC 589
             V  K+  E V+ Y +  N + E  ++L+++ I   C
Sbjct: 594 FSV-SKICNEYVAAYQDALNMLEE--IKLKQKAIENMC 628


>gi|343472131|emb|CCD15631.1| unnamed protein product, partial [Trypanosoma congolense IL3000]
          Length = 876

 Score =  470 bits (1210), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 261/552 (47%), Positives = 354/552 (64%), Gaps = 54/552 (9%)

Query: 772  DSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDT 831
            +SLQLAHKCILNSFYGYVMRKG+RWYSMEMAG+VTY GA +IQ AR L+++IG  LELDT
Sbjct: 2    ESLQLAHKCILNSFYGYVMRKGSRWYSMEMAGIVTYLGATLIQMARALVQQIGITLELDT 61

Query: 832  DGIWCVLPGSFPENFTFKTKD-LKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTY 890
            DGIWC LP SFPENFTF T +    K+TISYPCV+LN  V  + TN QYQT + P    Y
Sbjct: 62   DGIWCCLPQSFPENFTFTTNNPSSSKVTISYPCVVLNKMVHDDYTNHQYQTCISP--GVY 119

Query: 891  ETHSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKL 950
            E  SECSI FEVDGPY AM+LPAS+EEG  IKKRYAVF+ DG LA+LKGFE+KRRGEL L
Sbjct: 120  ERRSECSIYFEVDGPYLAMMLPASREEGKSIKKRYAVFDPDGRLADLKGFELKRRGELML 179

Query: 951  IKVFQAELFDKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSK 1010
            IK FQ+++F +FL G+T+ E Y + + VAN  LD+L ++G+     E+++ +SESS M++
Sbjct: 180  IKDFQSQVFRRFLDGTTLVEAYESASVVANVALDMLYSKGEGYEADEILEKLSESSNMTR 239

Query: 1011 SLADYGE-QKSCAVTTARRLSDFLGDTMVKDKGLRCQYIVACEPQGTPVSERAVPVAIFE 1069
             L++Y E QKS A+TTARR++DFLG  MVKDKGL CQ++++  P G PV+ERA+P+ IF 
Sbjct: 240  RLSEYPESQKSLALTTARRIADFLGPQMVKDKGLACQFVISRLPSGRPVTERAIPLTIFR 299

Query: 1070 TDAEIMKFYLRKWC---KTSSDVGIRSIVDWSYYKQRLSSAIQKIITIPAAMQKVSNPVP 1126
             D  +   +LRKW      S+++ ++ ++DW YY  R S+ +QKIITIPAA+Q V NPVP
Sbjct: 300  ADPTVRTHFLRKWTGDNTLSANIDLQHLLDWDYYIARYSACVQKIITIPAALQHVPNPVP 359

Query: 1127 RVVHPDWLYKKVREKEDKFRQRKLVDIFSSLKKDDFLNKTCNAETNLMDENVEDLEDFPK 1186
            RV +P+WL K+V+++  +F+Q  L  +F  +K +              + ++ D+ED   
Sbjct: 360  RVPYPEWLQKRVQQRSSRFKQISLTGMFEKMKSN--------------EGDIPDVEDLVN 405

Query: 1187 KRRNSVNGPRPIVRCFE-VNNEQKTVKTTDQVDSLRQQLEPSEVSDQQPSSQNAIDT-EN 1244
               N+        R    V  + +    T  VD     +E  E SD Q SS +A  + + 
Sbjct: 406  NSDNT--------RLHRGVGGDLQRNGATSGVDHSAYDVE--EKSDNQSSSDSAAGSHDG 455

Query: 1245 IDRIVDYKGWLELKKRKWKDNLDRRKKQKLGSLRASHQANGVSESL-GDMINHKEAQRRT 1303
             DR++D    LE       D +       + +L+  + A G + SL  D  N+       
Sbjct: 456  HDRLLDQAMALE-------DGV-------VNALKDKYFAPGSTHSLDADFFNNP------ 495

Query: 1304 GVGSYFRRQETA 1315
            GV ++  RQ+ A
Sbjct: 496  GVDAWLTRQKQA 507


>gi|159115199|ref|XP_001707823.1| DNA polymerase epsilon, catalytic subunit [Giardia lamblia ATCC
            50803]
 gi|157435930|gb|EDO80149.1| DNA polymerase epsilon, catalytic subunit [Giardia lamblia ATCC
            50803]
          Length = 2590

 Score =  462 bits (1189), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 280/690 (40%), Positives = 380/690 (55%), Gaps = 111/690 (16%)

Query: 536  AYEQLLNNLDRDLQYAIKVEGKMDLESVSNYDEVKNAIMEKLLRLQEEPIREECPLIYHL 595
            +Y   ++NL R ++  I           SNY EV+N I+E L+        +  PL+YHL
Sbjct: 673  SYGNHVDNLIRHVETTI----------CSNYSEVRNYIIEGLVACSNTVTSK--PLLYHL 720

Query: 596  DVAAMYPNIILTNRLQPPSIV-TDEVCTACDFN--RPGKTCLRKLEWVWRGEIFMGKRSD 652
            DVAAMYPNI+LTN+LQP +IV  +  C +CDF+  +  + C R +EW WRG  +    S+
Sbjct: 721  DVAAMYPNIMLTNKLQPTAIVDPNTTCASCDFSTIKEAQVCQRIMEWDWRGSYYPLDFSE 780

Query: 653  YYHLKKQIESEFVDGTNGHLSKSFLDLPKMEQQSRLKDRLKKYCQKAYKRVLDKPVTELR 712
            Y  +K Q  S+       H       L + E+   L +RL+ Y +  YK  L +   E+R
Sbjct: 781  YLMIKNQTISQIGADRWMHA------LTESEKARLLHERLETYSKSQYK--LKQKTEEMR 832

Query: 713  EAGI-CMRENSFYVDTVRSFRDRRYEYKGLNKVWKGKLSEAK------------ASGNSI 759
               I C RENSF++DTVR FRDRRY +K   K    KLS+AK            AS ++ 
Sbjct: 833  RKTIVCQRENSFFIDTVRKFRDRRYRFKREQKDHSLKLSKAKKQLTELMEAGLEASEDAQ 892

Query: 760  KIQEAQD----MVVLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQN 815
             ++   D    ++VL +SLQLAHKCILNSFYGY MRKG+RWYS+EMA  VT+ GA II+ 
Sbjct: 893  NLRREIDSQTGLIVLKESLQLAHKCILNSFYGYAMRKGSRWYSLEMAAAVTHAGATIIKR 952

Query: 816  ARLLIEKIGKPLELDTDGIWCVLPGSFPENFTFKTKD-------LKKKLTISYPCVMLNV 868
            AR LIE IG  LELDTDGIWC LP SFPE  TF   D         ++++ SYP  MLN 
Sbjct: 953  ARTLIEMIGFVLELDTDGIWCCLPSSFPETCTFTIIDPGNTDAQSSRRVSFSYPGTMLNA 1012

Query: 869  DVARNNTNDQYQTLV----DPVSKTYETHSEC---------------------------- 896
                 NTN QY   V    DP S  +    +C                            
Sbjct: 1013 LTQTQNTNKQYLINVIHNKDPPSHDHGIKLKCDKNAQGSLPGFDSNDMSLLLYASSPSRD 1072

Query: 897  --------SIEFEVDGPYKA-------------------MILPASKEEGILIKKRYAVFN 929
                    S   +++ P KA                   M+L A++EEG+ IKK+YAVF+
Sbjct: 1073 LLLGKNTSSSSTQLESPIKAWKRVNECTIEFEVDGPYSCMVLSAAREEGVRIKKKYAVFD 1132

Query: 930  DDGTLAELKGFEIKRRGELKLIKVFQAELFDKFLHGSTIEECYSAVAAVANRWLDLLDNQ 989
              G L+ELKGFE+KRRGELK+IK FQ  +F +FL G T+E+ Y   A VAN +LD++  +
Sbjct: 1133 LTGGLSELKGFELKRRGELKIIKSFQTRVFSQFLKGGTLEDAYDHAARVANTYLDIIYTK 1192

Query: 990  GKDIADSELIDYISESSTMSKSL-ADYGEQKSCAVTTARRLSDFLGDTMVKDKGLRCQYI 1048
            G  + D +LI  ISE+ST+  SL +    +KS ++T ARR++ FL        GL  +YI
Sbjct: 1193 GSFLTDQQLITLISEASTLKNSLNSTPKNRKSTSITCARRMTSFLDPLFASVDGLSVEYI 1252

Query: 1049 VACEPQGTPVSERAVPVAIFETDAEIMKFYLRKWC---KTSSDVGIRSIVDWSYYKQRLS 1105
            ++  P+G+PVSERAVPV IF +   +   +LR+W    K  +   IR ++DW YY  RLS
Sbjct: 1253 ISKLPEGSPVSERAVPVQIFNSPEHVRFKFLRQWIGDHKGDTVADIRELIDWDYYLARLS 1312

Query: 1106 SAIQKIITIPAAMQKV-SNPVPRVVHPDWL 1134
             AI KII +P+ +Q + ++PV R+  PDWL
Sbjct: 1313 GAIYKIIVVPSGLQGIAASPVQRIAFPDWL 1342



 Score =  405 bits (1041), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 248/641 (38%), Positives = 356/641 (55%), Gaps = 65/641 (10%)

Query: 1   MDRRRWDRQDGRRTKKQKLIRSAEEELEAKLG-YDLFSEGDKRLGWLLTFASSSL----- 54
           M  R+   Q    T++ K    A E  +A  G Y   + G  R GWL     + L     
Sbjct: 1   MASRKPSEQPRTGTEQIKEQLLAIERADALYGCYRTTTPGVYR-GWLYNLYETVLFGDPN 59

Query: 55  ----EDEDTRKVYSCIDLYFVSQDGSTFKSKYKFRPYFYAATKEKMEMDVEAYLRRRYES 110
                   +  +Y+ ++ YF++     FK     +PYFY     +  + ++  L   Y  
Sbjct: 60  EARIPSAQSPPLYAAVECYFMTAALDLFKIIIPVKPYFYIQAPVENYLFIQERLLLHYPD 119

Query: 111 QIADIEILEKEDLDLKNHLSGLHKSYLKISFDTVQQLMDVKKDLLHVVER---------- 160
              ++ ++E+ DL ++NH++    ++L++SFD +  L  V   LL ++ +          
Sbjct: 120 LHIEMTLIERNDLSVQNHIANDGIAHLRLSFDNLTNLRTVSTALLGLLRQKELSAVGDIY 179

Query: 161 NQAKFDAAEAYESILTGKREQRPQDFLDCIVDLREYDVPYHIRFAIDNDVRCGQWYDVSI 220
           N+A          I +  R  +    +D I ++ E+DV    RF IDN++    WY V++
Sbjct: 180 NKAGIARITPNTDIKSIPRTLK--SLVDYIGNVLEHDVNLTARFLIDNELTMSTWYSVTV 237

Query: 221 SST--GPLLEKRVDLLQRAEVH------VCAFDIETTKLPLKFPDADY-DIIMMISYMLD 271
                 PLLE+    L+  E        V A+DIETTK PL+FP+A+  D IM ISYM D
Sbjct: 238 KPELETPLLER----LEGGEFELPPVPKVLAYDIETTKKPLRFPNAEAGDQIMCISYMFD 293

Query: 272 GQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNVNNEIELLRLWFAHMQEVKPGIYVT 331
            QGYL+INR     DI D EYTPKPEF G F   N+  E +LL  +F H++  +P I+ T
Sbjct: 294 DQGYLLINRSIFSRDITDFEYTPKPEFPGKFACFNLPTEKDLLIFFFTHIRTARPNIFAT 353

Query: 332 YNGDYFDWPFLETRAAHHGFKMSEELGFQCDKNQGECRA---------KFACHLDCFAWV 382
           +NGD+FDWPF++ RAA +G  + +E+G    K++   RA         +   HLDCF WV
Sbjct: 354 FNGDFFDWPFVDVRAAAYGMDLLDEIGVL--KSESTSRAGLVEKQYYARAVPHLDCFRWV 411

Query: 383 KRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQMMASYSVSDAVATYYLYM 442
           +RDSYLPQGSQGLKAVT+AKL Y P E++PE MV +A+  PQ++ASYSVSDAVATYYLY 
Sbjct: 412 RRDSYLPQGSQGLKAVTRAKLKYHPDELSPELMVSYAQTDPQVLASYSVSDAVATYYLYR 471

Query: 443 TYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVICPNKHQSDP------E 496
            YVHPFIF+L TI+P++PD++LR+G+GTLCE LLMV+AY+ANV  PNKH +DP      +
Sbjct: 472 KYVHPFIFALGTILPLNPDDILRRGTGTLCEHLLMVEAYQANVPFPNKH-NDPLLQVVFD 530

Query: 497 KFYRNHLLESETYIGGHVECLESGVFRSDLPTSFKLDPSA--------YEQLLNNLDRDL 548
                 +L ++TY+GG VE + +GV+R+D+   F     A        Y  LL  +DRDL
Sbjct: 531 ANKEKRILLNQTYVGGKVEAINAGVYRNDIAYDFGYYSEAFKTRRFEGYGYLLRYIDRDL 590

Query: 549 QYAIKVEGKMDLESVSNYDEVKNAIMEKLLRLQEEPIREEC 589
              + V  K+  E  S Y  V N + E  + L+++ I   C
Sbjct: 591 IIQLNV-SKVCNEHTSAYQSVLNILEE--ISLEQKTIESIC 628


>gi|401399655|ref|XP_003880602.1| DNA polymerase, related [Neospora caninum Liverpool]
 gi|325115013|emb|CBZ50569.1| DNA polymerase, related [Neospora caninum Liverpool]
          Length = 2896

 Score =  461 bits (1186), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 316/994 (31%), Positives = 487/994 (48%), Gaps = 126/994 (12%)

Query: 522  FRSDLPTSFKLDPSAYEQLLNNLDRDLQYAIKVE-----GKMDLESVSNYDEVKNAIMEK 576
            FR+DL  +F LD  AY+ L+++LD  L + +  E       +  E   ++   +  I+++
Sbjct: 692  FRNDLEETFTLDSDAYQFLIDSLDETLLFWLNQENASSSSSLTPEDFPDWQVHRQDILDR 751

Query: 577  LLRLQEEPIREECPLIYHLDVAAMYPNIILTNRLQPPSIVTDEVCTACDFNRPGKTCLRK 636
            L+ L+   +    P+IYHLDV+AMYPNIILT+RLQPP++V +E C+ C F++    C R+
Sbjct: 752  LVSLRNARVLRSLPVIYHLDVSAMYPNIILTHRLQPPAVVDEEFCSQCPFSKEAALCQRR 811

Query: 637  LEWVWRGEIFMGKRSDYYHLKKQIESEFVDGTNGH------------------------- 671
            + W  + E+   ++     L+++++ +  + T                            
Sbjct: 812  MTWRRKLEVSPAEKGHILPLQQKLKMKLFEVTGDRREKASQAAKEAQGEDEASEDDWEED 871

Query: 672  -----------------------LSKSFLDLPKMEQQSRLKDRLKKYCQKAYKRV-LDKP 707
                                     K++ +L + ++   L   +K +  KAYK+  + K 
Sbjct: 872  EEGEKKKRGREGFGREETQAARATKKTWTELTEKQKHMELIKVVKDFSLKAYKKTKMQKE 931

Query: 708  VTELREAGICMRENSFYVDTVRSFRDRRYEYKGLNKVWKGKLSEA--KASGNSIKIQEAQ 765
            V +  EA +C REN FYVDTVR+FRDRRY +K   K  + +L E   +  G   + ++A 
Sbjct: 932  VDQ--EAIVCQRENPFYVDTVRAFRDRRYIFKRRLKAAE-RLREKLEREGGTFQEKKDAD 988

Query: 766  DMVVLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGK 825
            D+++L DSLQLAHKCILNSFYGYV R  ARWYSM+M  VVT  GA IIQ A+ +I+ +G 
Sbjct: 989  DVILLNDSLQLAHKCILNSFYGYVKRDAARWYSMQMGAVVTKAGADIIQGAKNMIDGLGV 1048

Query: 826  PLELDTDGIWCVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDP 885
             +ELDTDGIWC+LP  FP+ + F  K   K+    +P  +LN DV R  TNDQY    D 
Sbjct: 1049 TMELDTDGIWCMLPQKFPQKYVFHDKS-GKEFRFEFPTTILNQDVHRRYTNDQYLDF-DE 1106

Query: 886  VSKTYETHSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRR 945
             ++T++      + FE+DGP++AM LPAS++   L+KKRY +F  DG+++ELKGFE+KRR
Sbjct: 1107 ETQTFKRQVRNEVYFELDGPWRAMFLPASEKSDDLLKKRYVIFAQDGSISELKGFEVKRR 1166

Query: 946  GELKLIKVFQAELFDKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSE-LIDYISE 1004
            GEL+++K+FQ E+F K + G T EE Y A AAVA R+ DLL +QG  + D E L + I  
Sbjct: 1167 GELQIVKLFQTEVFPKLIEGKTKEEAYRAAAAVAYRYRDLLTSQGVSVQDDEDLEELIVT 1226

Query: 1005 SSTMSKSLADYGEQKSCAVTTARRLSDFL-GDTMVKDKGLRCQYIVACEPQGTPVSERAV 1063
               + K +   G  KS ++TT +RL++ L  +T + D  +  QYIV   P G   + RAV
Sbjct: 1227 KKVLGKPVVSQGLGKSMSITTGKRLAELLRNETYLTDAPVSTQYIVVNRPVGVEKTARAV 1286

Query: 1064 PVAIFETDAEIMKFYLRKWCKTS------------------------------SDVGIRS 1093
            PV +F +  E   FY +KW   +                              + + IR 
Sbjct: 1287 PVQLFHSSPETKAFYYQKWLNLTPTSVSSFSASGQTFGGAGDAGASAANTLALASIDIRQ 1346

Query: 1094 IVDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLYKKVREKEDKFRQRKLVDI 1153
            ++DWSYY +RL    QKI+ IPA  Q + NP+P V  P+WL K+  +  +   Q K+   
Sbjct: 1347 LIDWSYYSERLDVQFQKILCIPAMRQGLPNPIPEVAVPEWLKKQ--QATNNPLQAKMEHF 1404

Query: 1154 FSSLKKDDFLNKTCNAETNLMDENVE-DLEDFPKKRRNSVNGPRPIVRCFEVNNEQKTVK 1212
            F   KK+   N   +       E  E + ++ P    +       +V    +       +
Sbjct: 1405 F-RWKKNKLENAPESPRAEAKGERGEAETQERPPSADDLFGDEETVVDVENITEANGVRR 1463

Query: 1213 TTDQVDSLRQ-QLEPSEVSDQQPSSQNAIDTENIDRIVDYKGWLELKKRKWKDNLDRRKK 1271
               + D L Q Q E  E   +Q   +  +         D   W+  +K+KWK   +  ++
Sbjct: 1464 KPSEEDKLLQTQREERERQAKQRREEKRMWKH------DVGAWVAAQKQKWKQQREHLRQ 1517

Query: 1272 QKLGSLRASHQANGVSESLGDMINHKEAQRRTGVGSYFRRQETAMTRCH-WQIIQ-LVPS 1329
             +  S      A      L   +   +  +  G+  +    + A+     W +    V  
Sbjct: 1518 SRAFSAVQRLPAGLTPAVLTRNLGAVKLMKNWGLSLH----DVALLLTQPWHLFDFFVDP 1573

Query: 1330 SQSGVFLAWVVVEGI--MVRIPITVPRLFYLNSKDPIVEKFPGRRVNK------------ 1375
               G+F   V  +       +P+ V R  +LN+K  I E    R +              
Sbjct: 1574 RDPGLFYCRVSTDASRGFYTVPVQVYRQVFLNTKRDIGELLQDRNILSPDADISLKPLRG 1633

Query: 1376 --TLPHGRRSFNLIEVMIDEDQFRKESKKLAALL 1407
               LP G R  +L+E+ + E  F++E  KL +L 
Sbjct: 1634 VFALPRGMRQHDLVEMTMPESLFQREKNKLPSLF 1667



 Score =  211 bits (538), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 153/470 (32%), Positives = 222/470 (47%), Gaps = 90/470 (19%)

Query: 39  GDKRLGWLLTFASSSLE---DEDTRKVYSCIDLYFVSQDGSTFKSKYKFRPYFYAATKEK 95
           G KR G+L        E    ED ++  S + LYFVS+ G+T+++    RPYFY + +  
Sbjct: 222 GTKR-GYLYNMVQMQAEVATSEDKKETVSGLHLYFVSETGATWRTSLLHRPYFYISLRRT 280

Query: 96  MEMDVEAYLRRRYESQIADIEI-LEK---EDLDLKNHLSGL--------------HKSYL 137
                E  L+      + D E+  EK   EDL    HL  L               + ++
Sbjct: 281 RASYFEQ-LKEALMDLLGDAEVRFEKTFREDLSDPVHLGPLLPGWQAPEESKTSSLREFV 339

Query: 138 KISFDTVQQLMDVKKDLLHVVERNQ------------AKF-------------------- 165
           +ISF  V+QL+D + +L  +V RNQ            A F                    
Sbjct: 340 QISFANVKQLVDARDELRKIVRRNQEARDRQREEERLANFAEKTKAKNGAFASHTQSRFA 399

Query: 166 -----------------DAAEAYESILTGKRE-----------QRPQDFLDCIVDLREYD 197
                            D  + ++    G+RE           ++ +D    I D+ E D
Sbjct: 400 APDDMNFADVAFRNCAGDERDGHDPQRGGRREDGKGRGRKTRQEQGEDVTALIEDVFEAD 459

Query: 198 VPYHIRFAIDNDVRCGQWYDVSISSTG---PL-LEKRVDLLQRAEVHVCAFDIETTKLPL 253
           V Y  R  ID  +RCG W+DV  SS+    P+ L    +      + V A+DIE +K PL
Sbjct: 460 VLYITRCCIDLKLRCGLWHDVHRSSSALASPVALTPLPNCATAPPLRVLAWDIECSKQPL 519

Query: 254 KFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGY--FKVTNVNNEI 311
           KFPD++ D +++ISYM +GQGYLI+NR+ + EDI   E+  K   EG   F + N   E 
Sbjct: 520 KFPDSNTDHVILISYMFNGQGYLIVNRQWLSEDIHPFEFRAKKGMEGAGPFIIFNEKGEK 579

Query: 312 ELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDKNQGECRAK 371
           ELL  +  H+ +++P I  TYNGD FD+PF+  R   +G       G     +    +  
Sbjct: 580 ELLTRFVQHVLKLRPHILATYNGDSFDFPFVYKRGDVNGLDFISSFGITPFTSDSSYQGN 639

Query: 372 FA-CHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAK 420
            A  H+DCF WV+RDSYLPQGS+ LK V K KL ++P+EV+PEDM+   +
Sbjct: 640 SALIHIDCFKWVERDSYLPQGSRTLKLVCKEKLRFNPVEVDPEDMLSIGR 689



 Score = 57.0 bits (136), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 44/186 (23%), Positives = 89/186 (47%), Gaps = 15/186 (8%)

Query: 1483 AYRKVSVELKIHHLSVNALLKSNQVNEMEGGGLFGFDQDMNSGPYN-----NELCGFDET 1537
            A R+ ++  K  H S+++  +  +  E    G  G ++++    Y+       L  F  T
Sbjct: 2190 AVRRETLLKKEEHQSLSSPRRETESEERRKRGQKGINEELQEKDYDANGPDESLADFHST 2249

Query: 1538 TSSAPA-FRVVKQLIQRCLTD-AVTSGNVFADAILQHL-------YRWLCSPHSKLHDPV 1588
            +   PA FR + + +++   D +   G V   ++++HL       Y W+CSP + L DP 
Sbjct: 2250 SQFHPAAFRTLGRSLEKLYRDLSSLRGRVAYPSVVRHLVSLPNFFYAWVCSPEALLFDPA 2309

Query: 1589 LHRILHKVMQKVFAMLLAEF-RKLGATIIFANFSKVIIDTGKFDLSAAKAYCDSLLKALQ 1647
            LH+ + +     F++ L+E   +   +++FAN  ++++ T    LS  +    S++  L 
Sbjct: 2310 LHQKVLRYCTVYFSLFLSELSERRNLSVVFANPRRLLVATPHVLLSEGEKQLRSVIGHLN 2369

Query: 1648 TRELFE 1653
            +  LF+
Sbjct: 2370 STALFD 2375



 Score = 53.1 bits (126), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 45/183 (24%), Positives = 74/183 (40%), Gaps = 17/183 (9%)

Query: 1812 LEFIKHVCAAFALDQNVQHDVLV-------MRKNLLKYVRVREFAPEAEFRDPCPSFILP 1864
            LE +K +    A+D+ +   V          R  L       EF   A +R P  S +L 
Sbjct: 2696 LEAVKFLVRLLAMDRAIDFTVDSWAEAFDERRHELFALTGESEFCHLA-WRSPLKSLMLR 2754

Query: 1865 NVICSYCNDCRDLDL---CRDMALLAQDWH------CAMPQCGQPYDREVMENALLQIVR 1915
            +V C  C+   DLDL    R+   + ++        C  P+CG+ +   ++E  L + V 
Sbjct: 2755 DVECGACHTVDDLDLLLCIREEQEVLENGEVVDFKTCNCPRCGEAFPDPLVEALLYRAVG 2814

Query: 1916 QRERLYHLQDLVCIRCNQVKAAHLAEQCACAGSFRCKEDASDFRSKMQIFLNIANRQGFQ 1975
            ++   Y  QD  C  CN V A +   +C C    + +    D+   ++     A   G+ 
Sbjct: 2815 EKYYAYAAQDHPCSSCNAVNALYRRSKCRCGKPLKPRLKEEDWEEFIESVQEFAVEMGYD 2874

Query: 1976 LLQ 1978
             LQ
Sbjct: 2875 KLQ 2877


>gi|402471525|gb|EJW05242.1| hypothetical protein EDEG_00707 [Edhazardia aedis USNM 41457]
          Length = 2582

 Score =  446 bits (1146), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 243/665 (36%), Positives = 358/665 (53%), Gaps = 128/665 (19%)

Query: 590  PLIYHLDVAAMYPNIILTNRLQPPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEIFMGK 649
            P IYH+DVAAMYPNII+TNRLQP S++T+E C  CDF +    C RK+ W  R + +  K
Sbjct: 785  PKIYHMDVAAMYPNIIITNRLQPVSVITNENCIKCDFYQSNANCQRKMNWKMRVQFYPSK 844

Query: 650  RSDYYHLKKQIESE---------------------------------FVDGTNGH----- 671
              +   +K+Q+  E                                 F DG         
Sbjct: 845  SGEILQIKRQLSCEKIGYKELEKIGYFTNNKNFNDPNISHSSNNQAVFSDGKKQQSYIEK 904

Query: 672  --LSKSFLDLPKMEQQSRLKDRLKKYCQKAYKRVLDKPVTELREAGICMRENSFYVDTVR 729
               S +F +L   +Q+  LK+R+  + +  Y++     + +++   +C R+  FYV+ V+
Sbjct: 905  DKFSINFDELSLADQKLILKERILNHSKNIYRKTNLTEIIDMQNI-VCQRDEPFYVEVVK 963

Query: 730  SFRDRRYEYK-----------GLNKVW---------------KGKLSEAKASGNSIKIQE 763
            +FRD+RYEYK            L K +               K ++ E +     + + E
Sbjct: 964  NFRDKRYEYKCKYNEIRSDHENLKKQYDQLIKDNLIIPDTNVKMEIIENEKLSKLVLLNE 1023

Query: 764  AQDMV----VLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLL 819
              D V    ++++SLQ+AHKCILNSFYGYVMRKGARWYSMEMA +V  TG++II+ A+  
Sbjct: 1024 EIDNVKNKMIIFESLQIAHKCILNSFYGYVMRKGARWYSMEMAAIVCNTGSQIIKTAKEF 1083

Query: 820  IEKIGKPLELDTDGIWCVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQY 879
            ++ IG PLELDTDGIWC++P  FP+ +T     L    + S+   +LN  V+   TN QY
Sbjct: 1084 VDDIGLPLELDTDGIWCLIPTIFPDIYT-----LNNGKSFSFLVSILNFLVSEKFTNYQY 1138

Query: 880  Q-----------------------------------------TLVDP----------VSK 888
            Q                                         T  +P          +S+
Sbjct: 1139 QDEIFEKIENSFSRNTVAGYKVKSSSDKTSENTSFTNKRKKITCFEPDVEKLTRKNSISR 1198

Query: 889  TYETHSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGEL 948
             YE +   +I FE+DGPYKAMILPAS +EG LIKK+Y V N+   + ELKGFE KRRGEL
Sbjct: 1199 KYEINKINTISFEIDGPYKAMILPASTDEGKLIKKKYVVINNQDKICELKGFETKRRGEL 1258

Query: 949  KLIKVFQAELFDKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTM 1008
            ++IK FQ +LF  F+ GST+EECYS +  +   WL L+ N+G  + D ++ +  SES  M
Sbjct: 1259 EIIKKFQEDLFQLFVLGSTLEECYSNIKDLCQYWLSLVTNKGNVLTDHDIFELFSESKNM 1318

Query: 1009 SKSLADYGEQKSCAVTTARRLSDFLGDTMVKDKGLRCQYIVACEPQGTPVSERAVPVAIF 1068
            SK    Y  +K+ A  TA RLS+FLG+ ++K+ GL+CQY+++  P+  P++ RA+PV +F
Sbjct: 1319 SKEYKQYMGRKTTATCTAIRLSEFLGENILKESGLKCQYVISKFPENCPITARAIPVEVF 1378

Query: 1069 ETDAEIMKFYLRKWCKTSSDVGIRSIVDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRV 1128
            + +A    ++L KW        ++ I+DW YY++RL + I K++ +PA +Q + N +P V
Sbjct: 1379 QIEASKKDYFLEKWTGRKF-TSLKDILDWEYYRERLENVILKVVVLPAILQGIGNILPGV 1437

Query: 1129 VHPDW 1133
              P+W
Sbjct: 1438 KVPEW 1442



 Score =  210 bits (535), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 98/194 (50%), Positives = 133/194 (68%), Gaps = 5/194 (2%)

Query: 375 HLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQMMASYSVSDA 434
           HLDCF WVKRDSYLP G Q LK+ TKAKLGY P E++PE+M+ F +  PQ +A YSVSDA
Sbjct: 474 HLDCFLWVKRDSYLPMGMQSLKSATKAKLGYQPDEIDPEEMMWFMQNDPQKLAVYSVSDA 533

Query: 435 VATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVICPNKHQSD 494
           ++TY LY  YVHPFIFSL T+IPM+ ++VL KGSGTLCE LL+ + +K N++ P +   D
Sbjct: 534 ISTYLLYTKYVHPFIFSLCTLIPMNSEDVLSKGSGTLCEALLISEGFKKNILIPERKIGD 593

Query: 495 PEKFYRNHLLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQLLNNLDRDLQYAIKV 554
            + +Y+  L E   Y+GGHVECL SG+FRSD   +F ++    E +  N+   L+Y+   
Sbjct: 594 -DFYYKGRLCEEVNYVGGHVECLRSGIFRSDFNYNFHINLQRLEWIKENIQNILRYS--- 649

Query: 555 EGKMDLESVSNYDE 568
            G +D   + N ++
Sbjct: 650 -GDIDETEIHNLEK 662



 Score =  132 bits (332), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 113/353 (32%), Positives = 174/353 (49%), Gaps = 44/353 (12%)

Query: 29  AKLGYDLFSEGDKRLGWLLTFASSSLEDEDTRKVYSCIDLYFVSQDGSTFKSKYKFRPYF 88
           +  GY       K+ G+LL  +  S    ++  VY   +LYFV++    F  K +  P F
Sbjct: 38  SHFGYTELPPFIKKEGYLLNISLES----NSSGVY--FNLYFVTE-SEKFCVKKRHFPSF 90

Query: 89  YAATKEKMEMDVEAYLRRRYESQIADIEILEKEDLDLKNHLSGLHKSYLKI-SFDTVQQL 147
              +     M     +++ + + I  +EI+++ D    NHL+   K YL++  FD  +  
Sbjct: 91  LVESMNNHVM--SELIKKEFCTSIERVEIVQRIDPTESNHLNKKPKEYLRVFCFDEQKHK 148

Query: 148 M---DVKK----------DLLHVV--ERNQAKF-------DAAEAYE--SILTGKREQRP 183
           M   D+KK          D +++   E  + KF       D   A+E   I   K E   
Sbjct: 149 MLVNDLKKLAKYRRKTKSDDIYIEKDEDEEDKFYKMYKTLDDYLAFEDFKIFFDKTENDI 208

Query: 184 QDFLDCIVDLREYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLLEKRVDLLQRAEVHVCA 243
               + ++D+ E+D+PY I F   N++R G++Y +S +     + +   +L    V V A
Sbjct: 209 LTIDNLLIDIAEFDIPYEIDFLSTNNIRIGKYYFISKNDVDIYISESSQILPPKLV-VLA 267

Query: 244 FDIETTKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYT-PKPEFEGYF 302
           FDIE TK PLKFP A+ D I+MIS++++G+G+L+ NRE V E+IED  Y   +      F
Sbjct: 268 FDIEVTKDPLKFPCAEKDEIVMISFVVNGEGFLLTNREFVSEEIEDFYYNIEEHNLVTNF 327

Query: 303 KVTNVNNEIELL----RLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGF 351
           K+ N++ E  LL     L F H    KP I  TYNG  FD PF+E R A+  F
Sbjct: 328 KIFNMDCEALLLCKFIELIFLH----KPDIVTTYNGTTFDIPFIERRLANLNF 376


>gi|294917261|ref|XP_002778437.1| dna polymerase epsilon, catalytic subunit, putative [Perkinsus
            marinus ATCC 50983]
 gi|239886830|gb|EER10232.1| dna polymerase epsilon, catalytic subunit, putative [Perkinsus
            marinus ATCC 50983]
          Length = 1449

 Score =  430 bits (1105), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 210/370 (56%), Positives = 265/370 (71%), Gaps = 5/370 (1%)

Query: 790  MRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLPGSFPENFTFK 849
            MRKGARW+SM MAG+VTYTG+ +I+ AR  ++++G PLELDTDGIWC+LP SFPENF FK
Sbjct: 1    MRKGARWHSMTMAGIVTYTGSGLIREARAFVDRLGLPLELDTDGIWCMLPKSFPENFQFK 60

Query: 850  TKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEFEVDGPYKAM 909
             K   + LT+ YPC +LNV V    TN QYQ L      TY   S+ SI FE+DGPYK M
Sbjct: 61   LKS-GRVLTMPYPCSVLNVRVHEKYTNHQYQDLQP--DGTYARSSQNSIFFEIDGPYKCM 117

Query: 910  ILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFLHGSTIE 969
            +LPAS EE  L+KKRYAVFN+DG+LAELKGFEIKRRGELKLI+VFQ ELF K L G  IE
Sbjct: 118  LLPASTEEDRLLKKRYAVFNEDGSLAELKGFEIKRRGELKLIQVFQEELFPKCLEGGNIE 177

Query: 970  ECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLADYGEQKSCAVTTARRL 1029
            E Y+AV  VANRWL++LD +G  + D E+I  ISE  TMSKS+ D G  KS ++TTA R+
Sbjct: 178  EAYAAVGQVANRWLEVLDTKGASLTDEEVIHLISEKKTMSKSVEDSGALKSTSITTATRM 237

Query: 1030 SDFLGDTMVKDKGLRCQYIVACEPQGTPVSERAVPVAIFETDAEIMKFYLRKWCKTSS-- 1087
            ++FLG +++++KG+ C  I+A +P G   +ERA+PV IF  +  +   YLRKW    S  
Sbjct: 238  AEFLGPSILREKGISCHLIIARKPLGATPTERAIPVNIFSAEEHVKTKYLRKWMGDPSIR 297

Query: 1088 DVGIRSIVDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLYKKVREKEDKFRQ 1147
            +  IR I+DW YY+ RL +AIQKII IPA  Q V NP P V  P W  K+VRE+ED F+Q
Sbjct: 298  NFDIRDIIDWQYYRTRLGAAIQKIIGIPAMNQHVKNPCPSVELPQWAKKRVREREDTFKQ 357

Query: 1148 RKLVDIFSSL 1157
            +KL D+F+ +
Sbjct: 358  KKLTDMFARM 367


>gi|308160519|gb|EFO63005.1| DNA polymerase epsilon, catalytic subunit [Giardia lamblia P15]
          Length = 2589

 Score =  420 bits (1079), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 258/662 (38%), Positives = 355/662 (53%), Gaps = 101/662 (15%)

Query: 564  SNYDEVKNAIMEKLLRLQEEPIREECPLIYHLDVAAMYPNIILTNRLQPPSIV-TDEVCT 622
            SNY EV++ I+E L+      I    PL+YHLDVAAMYPNI+LTN+LQP +IV  +  C 
Sbjct: 691  SNYSEVRSHIIEGLIACSN--IVTSKPLLYHLDVAAMYPNIMLTNKLQPTAIVDPNTTCA 748

Query: 623  ACDFN--RPGKTCLRKLEWVWRGEIFMGKRSDYYHLKKQIESEFVDGTNGHLSKSFLDLP 680
             CDF+  +  + C R +EW WRG  +    S+Y  +K Q  S+       H       L 
Sbjct: 749  CCDFSTIKEAQVCQRIMEWDWRGSYYPLDFSEYLMIKNQAISQIGADRWMH------ALT 802

Query: 681  KMEQQSRLKDRLKKYCQKAYKRVLDKPVTELREAGI-CMRENSFYVDTVRSFRDRRYEYK 739
            + E+   L +RL+ Y +  YK  L +   E+R   I C RENSF++DTVR FRDRRY +K
Sbjct: 803  EFEKARLLHERLETYSKSQYK--LKQKTEEMRRKTIVCQRENSFFIDTVRKFRDRRYRFK 860

Query: 740  GLNKVWKGKLSEAK------------ASGNSIKIQEAQD----MVVLYDSLQLAHKCILN 783
               K    KLS AK            AS ++  ++   D    ++VL +SLQLAHKCILN
Sbjct: 861  REQKDHSLKLSTAKKQLAKLIEAGLEASEDAQNLRREIDSQAGLIVLKESLQLAHKCILN 920

Query: 784  SFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLPGSFP 843
            SFYGY MRKG+RWYS+EMA  VT+ GA II+ AR LIE IG  LELDTDGIWC LP SFP
Sbjct: 921  SFYGYAMRKGSRWYSLEMAAAVTHAGATIIKRARTLIEMIGFVLELDTDGIWCCLPSSFP 980

Query: 844  ENFTFKTKD-------LKKKLTISYPCVMLNVDVARNNTNDQY--QTLVDPVSKTYETHS 894
            E  TF   D         +K++ SYP  MLN      NTN QY    + + +S +++  +
Sbjct: 981  ETCTFIIIDPGNADAQSSRKVSFSYPGTMLNALTQTQNTNKQYLINVIHNKISPSHDHDA 1040

Query: 895  ECSIEFEVDGPYKA--------MILPASKEEGILIKKRYAV------------------- 927
                +    G +          ++  +S    +L+ K  +                    
Sbjct: 1041 NLKCDKNAQGSFSGFDSNDMSLLLYASSPSRNLLLGKSISSSNTQLESPIKAWKRVNECT 1100

Query: 928  --FNDDG---------------------TLAELKG-------FEIKRRGELKLIKVFQAE 957
              F  DG                      + +L G       FE+KRRGELK+IK FQ  
Sbjct: 1101 IEFEVDGPYSCMVLSAAREEGVRIKKKYAVFDLSGGLSELKGFELKRRGELKIIKSFQTR 1160

Query: 958  LFDKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSL-ADYG 1016
            +F +FL G T+E+ Y   A +AN +LD++  +G  + D +LI  ISE+ST+  SL +   
Sbjct: 1161 VFSQFLKGRTLEDAYGHAAKIANTYLDIIYAKGSFLTDQQLITLISEASTLKNSLNSTPK 1220

Query: 1017 EQKSCAVTTARRLSDFLGDTMVKDKGLRCQYIVACEPQGTPVSERAVPVAIFETDAEIMK 1076
             +KS ++T ARR++ FL        GL  +YI++  P+GTPVSERAVPV IF +   +  
Sbjct: 1221 NRKSTSITCARRIASFLDPLFASVDGLSVEYIISKFPEGTPVSERAVPVQIFNSPEYVRS 1280

Query: 1077 FYLRKWC---KTSSDVGIRSIVDWSYYKQRLSSAIQKIITIPAAMQKV-SNPVPRVVHPD 1132
             +LR+W    K  +   IR ++DW YY  RLS AI KII +P+ +Q + ++PV R+  PD
Sbjct: 1281 KFLRQWIGDHKGDTVADIRELIDWDYYLARLSGAIYKIIVVPSGLQGIATSPVQRITFPD 1340

Query: 1133 WL 1134
            WL
Sbjct: 1341 WL 1342



 Score =  405 bits (1042), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 234/580 (40%), Positives = 336/580 (57%), Gaps = 56/580 (9%)

Query: 64  SCIDLYFVSQDGSTFKSKYKFRPYFYAATKEKMEMDVEAYLRRRYESQIADIEILEKEDL 123
           + ++ YF++     FK     +PYFY     +  + ++  L   Y     D+ ++E+ DL
Sbjct: 73  AAVECYFMTTALDLFKIVIPVKPYFYIQAPVENYLFIQERLLLHYSDLHIDMTLVERNDL 132

Query: 124 DLKNHLSGLHKSYLKISFDTVQQLMDVKKDLLHVVERNQAKFDAAEAYESILTGKREQRP 183
            ++NH++    ++L++SFD +  L  V   LL ++ R +      + Y    TG     P
Sbjct: 133 SVQNHIANDGIAHLRLSFDNLTNLRTVSAALLGLL-RQKELSAVGDIYNR--TGIARITP 189

Query: 184 -----------QDFLDCIVDLREYDVPYHIRFAIDNDVRCGQWYDVSISST--GPLLEKR 230
                      +  +D I ++ E+DV    RF IDN++    WY+V++      PLLE+ 
Sbjct: 190 NMDIQSIPRTLKSLVDYIGNVLEHDVNLTARFLIDNELTMSTWYNVTVKPELETPLLER- 248

Query: 231 VDLLQRAEVH------VCAFDIETTKLPLKFPDADY-DIIMMISYMLDGQGYLIINRECV 283
              L+  E        V A+DIETTK PL+FP+A+  D IM ISYM D QGYL+INR   
Sbjct: 249 ---LEGGEFELPPVPKVLAYDIETTKKPLRFPNAEAGDQIMCISYMFDDQGYLLINRSIF 305

Query: 284 GEDIEDLEYTPKPEFEGYFKVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLE 343
             DI D EYTPKPEF G F   N+  E +LL  +F H++  +P I+ T+NGD+FDWPF++
Sbjct: 306 SRDITDFEYTPKPEFPGKFACFNLPTEKDLLIFFFTHIRTARPNIFATFNGDFFDWPFVD 365

Query: 344 TRAAHHGFKMSEELGFQCDKNQGECRA---------KFACHLDCFAWVKRDSYLPQGSQG 394
            RAA +G  + +E+G    K++   RA         +   HLDCF WV+RDSYLPQGSQG
Sbjct: 366 VRAAAYGMNLLDEIGIL--KSESTSRAGLIEKQYYARAVPHLDCFRWVRRDSYLPQGSQG 423

Query: 395 LKAVTKAKLGYDPLEVNPEDMVRFAKEKPQMMASYSVSDAVATYYLYMTYVHPFIFSLAT 454
           LKAVT+AKL Y P E++PE MV +A+  PQ++ASYSVSDAVATYYLY  YVHPFIF+L T
Sbjct: 424 LKAVTRAKLKYHPDELSPELMVSYAQTDPQVLASYSVSDAVATYYLYRKYVHPFIFALGT 483

Query: 455 IIPMSPDEVLRKGSGTLCEMLLMVQAYKANVICPNKHQSDP------EKFYRNHLLESET 508
           I+P++PD++LR+G+GTLCE LLMV+AY+ANV  PNKH +DP      +      +L ++T
Sbjct: 484 ILPLNPDDILRRGTGTLCEHLLMVEAYQANVPFPNKH-NDPLLQVVFDASKEKRILLNQT 542

Query: 509 YIGGHVECLESGVFRSDLPTSFKLDPSA--------YEQLLNNLDRDLQYAIKVEGKMDL 560
           Y+GG VE + +GV+R+D+   F     A        Y  LL  +DRDL   + V  K+  
Sbjct: 543 YVGGKVEAINAGVYRNDIAYDFGYYSEAFRTKRFEGYGYLLRYIDRDLIIQLSV-SKICN 601

Query: 561 ESVSNYDEVKNAIMEKLLRLQEEPIREECPLIYHLDVAAM 600
           E ++ Y  V N + E  + L+++ I   C    H  V  +
Sbjct: 602 EHMTTYQSVLNMLEE--ISLEQKVIESICERDSHSSVTEL 639


>gi|300709035|ref|XP_002996686.1| hypothetical protein NCER_100184 [Nosema ceranae BRL01]
 gi|239606006|gb|EEQ83015.1| hypothetical protein NCER_100184 [Nosema ceranae BRL01]
          Length = 1758

 Score =  415 bits (1067), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 295/1139 (25%), Positives = 550/1139 (48%), Gaps = 85/1139 (7%)

Query: 25   EELEAKLGYDLFSEGDKRLGWLLTFASSSLEDEDTRKVYSCIDLYFVSQDGSTFKSKYKF 84
            E+LE +  +  +   DK  G++  +    L   D    Y  I  YF+S+D   F  K   
Sbjct: 6    EDLELQFKFQEYLFSDKVEGYIFNY---QLITGDILPSYGKI--YFISKDIQNFFIK--- 57

Query: 85   RPYFYAATKEKMEM-DVEAYLRRRYESQIADIEILEKEDLDLKNHLSGLHKSYLKISFDT 143
             P++++   E + + DV+ YL+ +Y       E++E+ D++  NHL+   K +LK+    
Sbjct: 58   VPFYHSLLIECINISDVQEYLKIKYAEGYHHYELVERFDIEEYNHLNKPKKMFLKVFIKN 117

Query: 144  VQQLMDVKKDLLHVVERNQAKFDAAEAYESILTGKREQRPQDFLDCIVDLREYDVPYHIR 203
                  + +DL  +V RN+      + Y+ ++  + E +  D    I+++ ++D+P  I 
Sbjct: 118  QAIYSKIVRDLKQIVLRNKNNRSINDVYKEMMYSEDENKF-DVKTNILNIYDFDIPSEIL 176

Query: 204  FAIDNDVRCGQWYDVSISSTGPLLEKRVDLLQRAEVHVCAFDIETTKLPLKFPDADYDII 263
            FA    +R G W++ S +    ++   V++L+       AF I TT      PD++ D  
Sbjct: 177  FAEMYKIRVGCWFEFSYNGEVHIIS-AVNMLKIPNFRKLAFSIITTNQDYLNPDSNTDQA 235

Query: 264  MMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNVNNEIELLRLWFAHMQE 323
            +MIS   D    L+IN+  + E++ +LEYT   E    F + NV+ E +LL  +   +Q 
Sbjct: 236  IMISVKTDTTNILLINQNIIKENLNELEYTYGNE-SNIFTIYNVSCEEDLLLKFIEIIQI 294

Query: 324  VKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDKNQGECRAKFACHLDCFAWVK 383
             KP I +TYNG+ FD+ F+ETR   +G  M   +G     +   C   F  H DCF W+ 
Sbjct: 295  YKPHILITYNGNLFDFSFIETRLLKYGLIMKNLIGITRIFDYFSC--PFILHFDCFTWIS 352

Query: 384  RDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQMMASYSVSDAVATYYLYMT 443
            +   +P  +  L+   K  L      +    +  F  ++   + +  V + +  Y ++  
Sbjct: 353  KYGNIPYKNFTLEIAAKHMLDISIDNLVQSKIKFFGDKRFCALVNSIVKEVLVVYDIFNQ 412

Query: 444  YVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVICPNKHQSDPEKFYRNHL 503
             +    FSLATI+P    +++ +    L E +L+V++   +++ P+ +Q    K     +
Sbjct: 413  KIFYQTFSLATIVPFPICKIISEILEFLYESILIVESLNCSLLIPSINQKTKFKIQNGKI 472

Query: 504  LESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQLLNNLDRDLQYAIKVEGKMDLESV 563
            +   T    +  C + G+FR+D   +F L    +E +  N+D  L+         D  + 
Sbjct: 473  INKLTKNTLNPFCTKEGIFRADFEHNFILKDEEFEYICKNIDIFLK---------DFRNE 523

Query: 564  SNYDEVKNAIMEKLLRLQEEPIREECPLIYHLDVAAMYPNIILTNRLQPPSIVTDEVCTA 623
             +Y+ +K +I++ L +L      +    IYH+D+ ++Y +IIL  RLQP S VT   C  
Sbjct: 524  IDYNSIKTSIIDNLTKLNTGLNTKGN--IYHIDIKSLYTDIILALRLQPTSFVTKNTCIR 581

Query: 624  CDFNRPGKTCLRKLEWVWRGEIFMGKRSDYYHLKKQIESEFVDGTNGHLSK--------- 674
            CDF +    C+  L+W  + + F+ +  ++    KQ++ + +D  N    K         
Sbjct: 582  CDFYKNEFNCILHLDWQAKVDYFLLEPDEF----KQVKKDVIDDYNKKYHKDDGYKLENS 637

Query: 675  ------------SFLDLPKMEQQSRLKDRLKKYCQKAYKRVLDKPVTELREAGICMRENS 722
                        +F DL    Q+  L+++++ Y  + YK+   K V E  ++ +C  E S
Sbjct: 638  VKKYKTEASNYSNFDDLSTDMQKKILRNKIEDYSCEKYKKSSYK-VIENFQSIVCQLEFS 696

Query: 723  FYVDTVRSFRDRRYEYKGLNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHKCIL 782
            F ++ ++ F++    YK   +  K +L E  +S N  K +       L  S+  AH+ + 
Sbjct: 697  FMLNVLKKFKEYFILYKNNLENIKKELKENYSSENLKKSK-------LTSSIYWAHEYLY 749

Query: 783  NSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLPGSF 842
            NSF  Y+  +GARWYS EM  ++     +II+N   L+     PL ++++ IW +LP +F
Sbjct: 750  NSFCKYIYYEGARWYSTEMTIILDSIATEIIKNCTTLLNNFSLPLIVNSESIWTLLPFTF 809

Query: 843  PENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSEC-----S 897
            P+   FK+    KK   ++    +N  + +N            + +  +  +EC      
Sbjct: 810  PQEVEFKS---GKKF--NFLESFINFKILKN------------LKQQVKWKNECKEIEDK 852

Query: 898  IEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAE 957
            I F + GP+KA+I+P++ +E   ++ RY   N DGT+   K   +  + +   +   Q +
Sbjct: 853  INFNIYGPFKALIVPSTLQENNHLRSRYLALNFDGTIY--KKSSLYEKKDFDFLSNLQKK 910

Query: 958  LFDKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLADYGE 1017
            L+  F +G+ +EECY  ++ +    LD++DN+G  +  +E+    S+ + +  +  +  +
Sbjct: 911  LYLSFNYGNNLEECYCNLSKIIRESLDVIDNKGCFLTTNEICSLFSQYNILKNNGLEVAD 970

Query: 1018 QKSCAVTTARRLSDFLGDTMVKDKGLRCQYIVACEPQGTPVSERAVPVAIFETDAEIMKF 1077
            + + A   A+++++ + D+      L  +YI++  P   P+  R +P+++FET     K 
Sbjct: 971  KNNIAFHIAQKITEII-DSQYYFNFLEDKYIISIYPLNEPIYNRTIPISVFETQEN--KH 1027

Query: 1078 YLRKWCKTSSDVGIRSIVDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLYK 1136
             ++KWCK   ++ IR I+DW+YYK  +   + K+I +P+  Q+  N  P +   + +YK
Sbjct: 1028 LIKKWCKLDKELDIREIIDWNYYKSCIEETVIKLIVLPSRGQQAGNYFPFLKVSNNVYK 1086


>gi|413937001|gb|AFW71552.1| putative DNA polymerase epsilon catalytic subunit family protein [Zea
            mays]
          Length = 288

 Score =  408 bits (1048), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 185/290 (63%), Positives = 232/290 (80%), Gaps = 2/290 (0%)

Query: 1699 IAEYLPKEIQDHFVLVVSEFMYIPWKHAQKLAASRASLQEGSSCTPSITVAAAENFESHI 1758
            +AE LPK+ QDHFVL+VSEF+YIPWK  ++  A++A++++ +SCTPS+T+ AAEN E  +
Sbjct: 1    MAEDLPKDTQDHFVLIVSEFLYIPWKFMKEQVAAQATIRDDTSCTPSVTIMAAENLEGQV 60

Query: 1759 VQYVKGEISSYFTGKLLSIVRDAIHHMKKMNNDQHNSPGVMQTAANIHKVDAPLEFIKHV 1818
            +++++ +IS+YF  KLL  V D +HH K  +  + + P   ++  + HK DA LEFIKH+
Sbjct: 61   IEHLRDKISNYFADKLLRTVSDILHHFKGKSKHESDEPA--KSDPHTHKGDAALEFIKHI 118

Query: 1819 CAAFALDQNVQHDVLVMRKNLLKYVRVREFAPEAEFRDPCPSFILPNVICSYCNDCRDLD 1878
            CA  ALDQNVQHD+L MRKNLLK VRV+EFAPEA+F+DPC SF LPNVICSYCNDCRDLD
Sbjct: 119  CAVLALDQNVQHDILRMRKNLLKLVRVKEFAPEAQFQDPCASFTLPNVICSYCNDCRDLD 178

Query: 1879 LCRDMALLAQDWHCAMPQCGQPYDREVMENALLQIVRQRERLYHLQDLVCIRCNQVKAAH 1938
            LCRD AL  Q+W CA+PQCGQPY RE MENALLQ+VRQRERLYHLQDLVC+RC QVKAAH
Sbjct: 179  LCRDSALQGQEWRCAVPQCGQPYHREQMENALLQVVRQRERLYHLQDLVCVRCRQVKAAH 238

Query: 1939 LAEQCACAGSFRCKEDASDFRSKMQIFLNIANRQGFQLLQECTSWILEVQ 1988
            L+EQC+C GSFRCKE+ S F SKM++FL +A  Q F LLQ+C  WILE +
Sbjct: 239  LSEQCSCGGSFRCKEEPSYFLSKMRVFLKVAVSQKFPLLQDCVQWILEAR 288


>gi|385301905|gb|EIF46063.1| dna-directed dna polymerase catalytic subunit a [Dekkera
           bruxellensis AWRI1499]
          Length = 296

 Score =  400 bits (1028), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 180/293 (61%), Positives = 231/293 (78%), Gaps = 1/293 (0%)

Query: 264 MMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNVNNEIELLRLWFAHMQE 323
           MMISYM+DG+GYLI NRE + EDI+D EYTP+PE+ G F + N  NE  LL  +F H+++
Sbjct: 1   MMISYMIDGEGYLITNREIISEDIQDFEYTPRPEYPGSFTIFNEPNEKALLEKFFQHIRD 60

Query: 324 VKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDKNQGECRAKFACHLDCFAWVK 383
           V+P +  T+NGD+FDWPF+E+RA++HG  M  E+GF  DK+  E ++ + CH+DCF WVK
Sbjct: 61  VRPTVIATFNGDFFDWPFVESRASYHGLDMHHEIGFARDKDD-EYKSTYCCHMDCFRWVK 119

Query: 384 RDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQMMASYSVSDAVATYYLYMT 443
           RDSYLPQG+QGLKAVT AKLGY+P E++PE M  +A EKPQ ++ YSVSDAVATYYLY  
Sbjct: 120 RDSYLPQGAQGLKAVTTAKLGYNPTELDPELMTPYAYEKPQTLSEYSVSDAVATYYLYYK 179

Query: 444 YVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVICPNKHQSDPEKFYRNHL 503
           YVHPFIFSL TIIP++PDEVLRKG+GTLCEMLLMV AY+  ++ PNKH    E+F+  HL
Sbjct: 180 YVHPFIFSLCTIIPLNPDEVLRKGTGTLCEMLLMVHAYQNGIVLPNKHTDPLERFFNGHL 239

Query: 504 LESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQLLNNLDRDLQYAIKVEG 556
           +ESETY+GGHVE LE+GVFR+DL + FK+DP+A + LL +L   L++AI  EG
Sbjct: 240 IESETYVGGHVESLEAGVFRADLDSDFKIDPTAVDMLLGDLRNALKFAITEEG 292


>gi|389584524|dbj|GAB67256.1| DNA polymerase epsilon catalytic subunit a [Plasmodium cynomolgi
            strain B]
          Length = 2061

 Score =  395 bits (1015), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 215/469 (45%), Positives = 292/469 (62%), Gaps = 33/469 (7%)

Query: 716  ICMRENSFYVDTVRSFRDRRYEYK-GLNKVWKGKLSEAKASG-NSIKIQEAQDMVVLYDS 773
            +C REN FYVDTVR+FRDRRY YK GL +    K    KA+  + IKIQE  D ++L DS
Sbjct: 27   VCQRENPFYVDTVRTFRDRRYVYKKGLKECEHEKKELLKANKIDYIKIQELDDKILLNDS 86

Query: 774  LQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDG 833
            LQLAHKCILNSFYGYV RK +RWYS +M  +VTYTG++II  A  LI KIG P+ELDTDG
Sbjct: 87   LQLAHKCILNSFYGYVKRKSSRWYSDQMGAIVTYTGSQIINGAFNLINKIGIPVELDTDG 146

Query: 834  IWCVLPGSFPENF----------------------TFKTKDLKKKLTISYPCVMLNVDVA 871
            IWC+LP  FPE +                        K     KK+   +P  +LN ++ 
Sbjct: 147  IWCMLPKKFPEIYDVYILERSVLNKMKEYEDKTEEELKNDTSVKKVEFEFPTNILNFEMH 206

Query: 872  RNNTNDQYQTLVDPVSKTYETHSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDD 931
            +  TNDQY  + +  +  YE  S+  I FE+DGP+  M LPAS++   L+KKRY VFND 
Sbjct: 207  KKWTNDQY-LIYNESTDDYECISKNEIFFELDGPWHGMFLPASEKSDDLLKKRYVVFNDK 265

Query: 932  GTLAELKGFEIKRRGELKLIKVFQAELFDKFLHGSTIEECYSAVAAVANRWLDLLDNQGK 991
              ++ELKGFEIKRRGEL++I+ FQ+E+F+ FL G T EE Y   +  AN+W +L+D++  
Sbjct: 266  YKISELKGFEIKRRGELRIIQKFQSEIFNHFLKGKTKEESYYYASLTANKWKNLIDSKAV 325

Query: 992  DI-ADSELIDYISESSTMSKSLADYGEQKSCAVTTARRLSDFLGDT-MVKDKGLRCQYIV 1049
            DI  D EL D I     ++KS+ +    KS  +TTA+RLS+ L +T  V+D  +  Q+IV
Sbjct: 326  DIDNDDELFDLILAKKVLNKSVKEQPNAKSFGITTAKRLSELLCNTSYVEDNNVSTQFIV 385

Query: 1050 ACEPQGTPVSERAVPVAIFETDAEIMKFYLRKW--CKTSSD--VGIRSIVDWSYYKQRLS 1105
            A +P G+ ++ RA+P+ IF+T+ E    YL KW   K   D  V +R I+DW YYKQ+L 
Sbjct: 386  ASKPVGSDITFRAIPIQIFKTNVETQIHYLGKWLGVKFPPDVPVNVRDIIDWDYYKQKLE 445

Query: 1106 SAIQKIITIPAAMQKVSNPVPRVVHPDWLYKKVREKEDKFRQRKLVDIF 1154
              I K++ IPA  Q ++NP+  +  P+WL K++   E K  Q+K+   F
Sbjct: 446  VQILKLVIIPAIKQNINNPITSISVPEWLKKQINISEGK--QKKITAFF 492


>gi|413936997|gb|AFW71548.1| putative DNA polymerase epsilon catalytic subunit family protein
           [Zea mays]
          Length = 349

 Score =  390 bits (1002), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 181/256 (70%), Positives = 221/256 (86%)

Query: 6   WDRQDGRRTKKQKLIRSAEEELEAKLGYDLFSEGDKRLGWLLTFASSSLEDEDTRKVYSC 65
           W R    + K+Q+L   AEE LE++LG+  +++G++RLGWLLTF+ SS EDEDT K+YSC
Sbjct: 24  WRRSGSAKAKEQRLRLGAEELLESRLGFAPYTDGERRLGWLLTFSPSSWEDEDTGKIYSC 83

Query: 66  IDLYFVSQDGSTFKSKYKFRPYFYAATKEKMEMDVEAYLRRRYESQIADIEILEKEDLDL 125
           +DLYFVSQDGSTFK KYKFRPYFYAATK+KME++VEAY+RRRYE +I+DIEI+EKEDLDL
Sbjct: 84  VDLYFVSQDGSTFKVKYKFRPYFYAATKDKMELEVEAYIRRRYEGEISDIEIIEKEDLDL 143

Query: 126 KNHLSGLHKSYLKISFDTVQQLMDVKKDLLHVVERNQAKFDAAEAYESILTGKREQRPQD 185
           KNHLSGL + YLK+ FDTVQQLM V+ DLLHVVE+N+ K DA EA+ESI   KR +RPQD
Sbjct: 144 KNHLSGLKRKYLKLQFDTVQQLMRVRNDLLHVVEKNEEKIDAVEAFESIHGVKRVERPQD 203

Query: 186 FLDCIVDLREYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLLEKRVDLLQRAEVHVCAFD 245
           +++ I+DLREYDVPYH+RFAIDNDVR GQWY+V++S +  LL++R DLLQRAEVHVCAFD
Sbjct: 204 YINYIIDLREYDVPYHVRFAIDNDVRSGQWYNVNVSGSDVLLQRREDLLQRAEVHVCAFD 263

Query: 246 IETTKLPLKFPDADYD 261
           IETTKLPLKFPDA+YD
Sbjct: 264 IETTKLPLKFPDAEYD 279


>gi|297264001|ref|XP_001117877.2| PREDICTED: DNA polymerase epsilon catalytic subunit A-like [Macaca
            mulatta]
          Length = 386

 Score =  380 bits (976), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 176/283 (62%), Positives = 232/283 (81%), Gaps = 2/283 (0%)

Query: 875  TNDQYQTLVDPVSKTYETHSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTL 934
            TNDQYQ L +P S TY T SE SI FEVDGPY AMILPASKEEG  +KKRYAVFN+DG+L
Sbjct: 84   TNDQYQELAEPSSLTYVTRSENSIFFEVDGPYLAMILPASKEEGKKLKKRYAVFNEDGSL 143

Query: 935  AELKGFEIKRRGELKLIKVFQAELFDKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIA 994
            AELKGFE+KRRGEL+LIK+FQ+ +F+ FL GST+EE Y +VA VA+ WLD+L ++  ++ 
Sbjct: 144  AELKGFEVKRRGELQLIKIFQSSVFEAFLKGSTLEEVYGSVAKVADYWLDVLYSKAANMP 203

Query: 995  DSELIDYISESSTMSKSLADYGEQKSCAVTTARRLSDFLGDTMVKDKGLRCQYIVACEPQ 1054
            DSEL + ISE+ +MS+ L DYGEQKS +++TA+RL++FLGD MVKD GL C+YI++ +P+
Sbjct: 204  DSELFELISENRSMSRKLEDYGEQKSTSISTAKRLAEFLGDQMVKDAGLSCRYIISRKPE 263

Query: 1055 GTPVSERAVPVAIFETDAEIMKFYLRKWCKTSS--DVGIRSIVDWSYYKQRLSSAIQKII 1112
            G+PV+ERA+P+AIF+ +  + K +LRKW K+SS  D  IR+I+DW YY +RL SAIQKII
Sbjct: 264  GSPVTERAIPLAIFQAEPMVRKHFLRKWLKSSSLQDFDIRAILDWDYYIERLGSAIQKII 323

Query: 1113 TIPAAMQKVSNPVPRVVHPDWLYKKVREKEDKFRQRKLVDIFS 1155
            TIPAA+Q+V NPVPRV HPDWL+KK+ EK D ++Q+K+ ++F+
Sbjct: 324  TIPAALQQVKNPVPRVKHPDWLHKKLLEKNDVYKQKKISELFT 366


>gi|385301906|gb|EIF46064.1| dna-directed dna polymerase catalytic subunit a [Dekkera bruxellensis
            AWRI1499]
          Length = 263

 Score =  372 bits (954), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 177/264 (67%), Positives = 214/264 (81%), Gaps = 1/264 (0%)

Query: 767  MVVLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKP 826
            M+VLYDS+QLAHK ILNSFYGYVMRKG+RWYSMEMAGV   TGA IIQ AR LI ++G+P
Sbjct: 1    MLVLYDSMQLAHKVILNSFYGYVMRKGSRWYSMEMAGVTCLTGATIIQMARALIGRLGRP 60

Query: 827  LELDTDGIWCVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPV 886
            LELDTDGIWC LP SFP+ FTFK K+  K  + +YPC MLN  V +  TN+QYQTLVDPV
Sbjct: 61   LELDTDGIWCALPKSFPDTFTFKLKN-GKTTSTTYPCSMLNYIVHQRFTNEQYQTLVDPV 119

Query: 887  SKTYETHSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRG 946
               YE  SE +I FE DGPYKAMILP SKEEG  +KKRYAVFN DG+LAELKGFE+KRRG
Sbjct: 120  KMRYEVKSENTIFFEADGPYKAMILPTSKEEGKGLKKRYAVFNFDGSLAELKGFELKRRG 179

Query: 947  ELKLIKVFQAELFDKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESS 1006
            EL+LIK FQ+++F  FL G+T+EECY+ VA VANRWLD+LD+ GK + D +LI+ I E+ 
Sbjct: 180  ELQLIKNFQSDIFKLFLDGTTLEECYATVANVANRWLDVLDSHGKMLEDEDLIELICENR 239

Query: 1007 TMSKSLADYGEQKSCAVTTARRLS 1030
            +MSK+LA+YG+QKS ++TTA+R+ 
Sbjct: 240  SMSKTLAEYGQQKSTSITTAKRIG 263


>gi|70938082|ref|XP_739763.1| hypothetical protein [Plasmodium chabaudi chabaudi]
 gi|56516998|emb|CAH84337.1| hypothetical protein PC300986.00.0 [Plasmodium chabaudi chabaudi]
          Length = 488

 Score =  370 bits (950), Expect = 5e-99,   Method: Compositional matrix adjust.
 Identities = 185/427 (43%), Positives = 276/427 (64%), Gaps = 19/427 (4%)

Query: 237 AEVHVCAFDIETTKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKP 296
           A ++V A+DIE  K  LKFPD + D I++ISYM + QGYLI+NR  + ++I +  Y P  
Sbjct: 22  APLNVLAWDIECYKDELKFPDKEKDEIILISYMYNAQGYLIVNRNVMSKNIREFLYKPNN 81

Query: 297 EFEG--YFKVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMS 354
           E+ G   FK+ N  NE  LL+ +  H++ ++  I+VTYNGD+FD P+L  R   +   + 
Sbjct: 82  EYSGAGTFKIFNEQNEYFLLKRFIEHIKLLRIHIFVTYNGDFFDIPYLYRRCEINNISIP 141

Query: 355 EELGFQCDKNQGECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPED 414
           +E+GF  + N+ EC   F  ++D + WV+RDSYLP GS+ LK+V K KL Y+P EV+PE 
Sbjct: 142 KEIGFVMN-NKKECSCNFILNIDAYKWVERDSYLPNGSRTLKSVCKIKLKYNPTEVDPEL 200

Query: 415 MVRFAKEKPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEM 474
           MV  A+  PQ +A YSVSDAVAT+YLY  ++H F+F+L +IIPM+PD VLR+GSGTLCE 
Sbjct: 201 MVPIARNNPQHLAVYSVSDAVATFYLYDKFIHSFLFALCSIIPMNPDNVLRQGSGTLCEQ 260

Query: 475 LLMVQAYKANVICPNKHQSDPEKFY------RNHLLESETYIGGHVECLESGVFRSDLPT 528
           LLM +AYK N++ PNK +    +++      + + +  ++++GG V+ L+ G++R DL  
Sbjct: 261 LLMAEAYKKNILFPNKSKPIYNQYFTDASNKKKYFIYDDSFVGGKVQSLKCGIYRDDLKE 320

Query: 529 SFKLDPSAYEQLLNNLD--------RDLQYAIKVEGK--MDLESVSNYDEVKNAIMEKLL 578
           +F LD + Y+ LLNN+D        +DL   + +  K  ++ + + N + +KN I++KL 
Sbjct: 321 NFHLDANTYKYLLNNVDNIIDFWIQKDLNKNLNINDKKYVNKKQILNLESIKNDIIQKLT 380

Query: 579 RLQEEPIREECPLIYHLDVAAMYPNIILTNRLQPPSIVTDEVCTACDFNRPGKTCLRKLE 638
              + P    CP IYHLDVAAMYPNIIL++RLQP +I+T + C  C + +    C +K+ 
Sbjct: 381 FFIQNPNISSCPNIYHLDVAAMYPNIILSHRLQPNAIITHDHCFNCSYYKQRHLCQKKMT 440

Query: 639 WVWRGEI 645
           W  + EI
Sbjct: 441 WKRKLEI 447


>gi|74137998|dbj|BAE25406.1| unnamed protein product [Mus musculus]
          Length = 1198

 Score =  323 bits (828), Expect = 6e-85,   Method: Compositional matrix adjust.
 Identities = 196/609 (32%), Positives = 320/609 (52%), Gaps = 70/609 (11%)

Query: 1442 LARYAHILWISDDGVPDLGGTSEEDECFA---DEVHQPVLTYPGAYRKVSVELKIHHLSV 1498
            L  + H+LW+S    PDLGG   +D       D+     +   G Y  V VEL I +L+V
Sbjct: 591  LQHHNHLLWLSPTSRPDLGGKEADDNRLVMEFDDRATVEINSSGCYSTVCVELDIQNLAV 650

Query: 1499 NALLKSNQVNEMEGGGLFG--FD-------QDMNSG-PYNNELCGFDETTSSAPAFRVVK 1548
            N +L+S+ VN+MEG G  G  FD       +DM +G    + L  +DET   +  FR++K
Sbjct: 651  NTILQSHHVNDMEGAGSMGISFDVIQQASLEDMVTGNQAASALANYDETALCSSTFRILK 710

Query: 1549 QLIQRCLTDAVTSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEF 1608
             ++   + +     N++AD  + H YRWL SP S LHDP LHR LH +M+K+F  L+AEF
Sbjct: 711  SMVVGWVKEITQYHNIYADNQVMHFYRWLQSPCSLLHDPALHRTLHNMMKKLFLQLIAEF 770

Query: 1609 RKLGATIIFANFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLF 1668
            ++LG+++++ANF+++I+ T K  +  A AY + +  ++ ++E+F  + +     W  LL+
Sbjct: 771  KRLGSSVVYANFNRIILCTKKRRIEDALAYVEYITNSIHSKEIFHSLTISFSRCWEFLLW 830

Query: 1669 MDQYNYGGIPARADESL------DDDSQV--------------------------DIV-S 1695
            MD  NYGGI  +   S+      + DSQ                           D++ +
Sbjct: 831  MDPSNYGGIKGKVPSSIHCGQVKEQDSQAREETDEEEEDKEKDEEEEGMGESEVEDLLEN 890

Query: 1696 SWNIAEYLPK--EIQDHFVLVVSEFMYIPWKHAQK-----LAASRASLQEGSSCTPSITV 1748
            +WNI ++LP+    Q +F+++VS ++   ++  ++        S    ++G+S     + 
Sbjct: 891  NWNILQFLPQAASCQSYFLMIVSAYIVAVYQSMKEELRHSAPGSTPVKRKGASQFSQESE 950

Query: 1749 AAAENFESHIV---QYVKGEIS-SYFTGKLLSIVRDAIHHMKKMNNDQHNSPGVMQTAAN 1804
             A  +    I     YV  E++ S+FT  +   ++  +   +         P +    ++
Sbjct: 951  GATGSLPGMITFSQDYVANELTQSFFT--ITQKIQKKVTGSRNTTEPSEMFPVL--PGSH 1006

Query: 1805 IHKVDAPLEFIKHVCAAFALDQNVQHDVLVMRKNLLKYVRVREFAPEAEFRDPCPSFILP 1864
            +   +  LEFIK+VC   +LD N+ + V  + ++LL+ V V EF+ EA+FRDPC S++LP
Sbjct: 1007 LLLNNPALEFIKYVCKVLSLDTNITNQVNKLNRDLLRLVDVGEFSEEAQFRDPCHSYVLP 1066

Query: 1865 NVICSYCNDCRDLDLCRDM------ALLAQDWHCAMPQCGQPYDREVMENALLQIVRQRE 1918
             VIC  CN CRDLDLC+D       A+L Q W C+   C  PYD   +E+AL++ ++++ 
Sbjct: 1067 EVICHSCNFCRDLDLCKDSSFSQDGAILPQ-WLCS--NCQAPYDSSAIESALVEALQRKL 1123

Query: 1919 RLYHLQDLVCIRCNQVKAAHLAEQCACAGSFRCKEDASDFRSKMQIFLNIANRQGFQLLQ 1978
              + LQDLVC++C  +K  H+   C+CAG F        F  +++IF NIA       LQ
Sbjct: 1124 MAFTLQDLVCLKCRGMKETHMPVYCSCAGDFTLTIRTEVFMEQIRIFQNIAKYYSMSYLQ 1183

Query: 1979 ECTSWILEV 1987
            E   W+L+ 
Sbjct: 1184 ETIEWLLQT 1192



 Score =  211 bits (537), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 129/368 (35%), Positives = 198/368 (53%), Gaps = 39/368 (10%)

Query: 1055 GTPVSERAVPVAIFETDAEIMKFYLRKWCKTSS--DVGIRSIVDWSYYKQRLSSAIQKII 1112
            G+PV+ERA+P+AIF+ +  + K +LRKW K+SS  D  IR+I+DW YY +RL SAIQKII
Sbjct: 1    GSPVTERAIPLAIFQAEPTVRKHFLRKWLKSSSLQDFDIRTILDWDYYIERLGSAIQKII 60

Query: 1113 TIPAAMQKVSNPVPRVVHPDWLYKKVREKEDKFRQRKLVDIFSSLKKDDFLNKTCNAETN 1172
            TIPAA+Q+V NPVPRV HPDWL+KK+ EK D ++Q+K+ ++F    K   +     A  N
Sbjct: 61   TIPAALQQVKNPVPRVKHPDWLHKKLLEKNDIYKQKKISELFVLEGKRQIV--MAQASEN 118

Query: 1173 LMDENVEDLED--FPKKRRNSVNGPRPIVRCFEVNNEQKTVKTTDQVDSLRQQLEPSEVS 1230
             +     D+ED    K   ++V       R +E   E + +  T         +   EV 
Sbjct: 119  SLSLCTPDMEDIGLTKPHHSTVPVATKRKRVWETQKESQDIALT---------VPWQEVL 169

Query: 1231 DQQPSSQNAIDTENIDRIVDYKGWLELKKRKW----KDNLDRRKKQKLGSLRASHQANGV 1286
             Q PS    + T   + +V    WL+  K+KW    +  L  RKKQ+L S     +   +
Sbjct: 170  GQPPS----LGTTQEEWLV----WLQFHKKKWQLQAQQRLALRKKQRLESAEDMPRLGPI 221

Query: 1287 SESLGDMINHKEAQRRTGVGSYFRRQETAMTRCHWQIIQLVPSSQSGVFLAWVVVEGIMV 1346
             E              TG+GS+ RR   ++    WQIIQ+  + Q+G+F  W ++   + 
Sbjct: 222  REGPS-----------TGLGSFLRRTARSIMDLPWQIIQISETRQAGLFRLWAIIGNDLH 270

Query: 1347 RIPITVPRLFYLNSKDPIVEKFPG-RRVNKTLPHGRRSFNLIEVMIDEDQFRKESKKLAA 1405
             I +++PR+FY+N +    E  P  R+VN+ LP     +NL E  + ED +++   ++  
Sbjct: 271  CIKLSIPRVFYVNQRVAKAEDGPAYRKVNRALPRSNIVYNLYEYSVPEDMYQEHINEINT 330

Query: 1406 LLADPEVE 1413
             L+ P++E
Sbjct: 331  ELSVPDIE 338


>gi|355712638|gb|AES04415.1| polymerase , epsilon [Mustela putorius furo]
          Length = 809

 Score =  322 bits (824), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 194/602 (32%), Positives = 316/602 (52%), Gaps = 61/602 (10%)

Query: 1442 LARYAHILWISDDGVPDLGGTSEEDECFA---DEVHQPVLTYPGAYRKVSVELKIHHLSV 1498
            L R++H+LW+S    PDLGG   +D       D+     +  PG Y  V VEL + +L+V
Sbjct: 206  LQRHSHLLWLSPTSRPDLGGKEADDNRLVMEFDDQASVEINCPGCYSTVCVELDLQNLAV 265

Query: 1499 NALLKSNQVNEMEGGGLFG--FD-------QDMNSG-PYNNELCGFDETTSSAPAFRVVK 1548
            N +L+S+ +N+MEG    G  FD       +DM +G    + L  +DET   +  FR++K
Sbjct: 266  NTILQSHHINDMEGADSVGISFDVLQQASLEDMITGNQAASALASYDETALCSSTFRILK 325

Query: 1549 QLIQRCLTDAVTSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEF 1608
             ++   + +     NV+AD  + H YRWL +P S LHDP LHR LH +M+K+F  L+AEF
Sbjct: 326  SMVVGWVKEITQYRNVYADNQVMHFYRWLRAPSSLLHDPALHRTLHSMMKKLFLQLIAEF 385

Query: 1609 RKLGATIIFANFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLF 1668
            ++LG+++++ANF+++I+ T K  +  A AY + +  ++ ++ELF  + +     W  LL+
Sbjct: 386  KRLGSSVVYANFNRIILCTKKRRVEDALAYVEYVTNSIHSKELFHSLTISFSRSWEFLLW 445

Query: 1669 MDQYNYGGI----PAR---------------------------ADESLDDDSQVDIVSSW 1697
            MD  NYGGI    P+R                            D + + D +  + ++W
Sbjct: 446  MDPSNYGGIKGSVPSRIHCGQGSPEEDREEEEEEEEAEAEEEEGDGAPEPDVEDKLENNW 505

Query: 1698 NIAEYLPK--EIQDHFVLVVSEFMYIPW----KHAQKLAASRASLQEGSSCTPSITVAAA 1751
            NI ++LP+    Q +F+++VS ++   +    +  ++ A     L+       S    AA
Sbjct: 506  NIVQFLPQAASCQSYFLMIVSAYIVAVYHSMKEELRRSAPGSTPLRRRGPSQLSQDAPAA 565

Query: 1752 ENFESHIVQYVKGEISSYFTGKLLSIVRDAIHHMKKMNNDQHNSPGVMQTAANIHKVDAP 1811
                  ++ + +  +++  T    SI +     +    N    S    Q   +   ++ P
Sbjct: 566  GALPG-MITFSQDYVANELTQSFFSITQKIQKKVTGSRNSAELSSLFPQLPGSHLLLNNP 624

Query: 1812 -LEFIKHVCAAFALDQNVQHDVLVMRKNLLKYVRVREFAPEAEFRDPCPSFILPNVICSY 1870
             LEF+K+VC   +LD N+ + V  + ++LL+ V V EF+ EA+FRDPC S++LP VIC  
Sbjct: 625  ALEFVKYVCKVLSLDTNITNQVNKLNRDLLRLVDVGEFSEEAQFRDPCRSYMLPEVICRS 684

Query: 1871 CNDCRDLDLCR------DMALLAQDWHCAMPQCGQPYDREVMENALLQIVRQRERLYHLQ 1924
            CN CRDLDLC+      D A+L Q W C+   C   YD  V+E AL++ ++++   + LQ
Sbjct: 685  CNFCRDLDLCKESSSSQDGAVLPQ-WLCS--NCQVAYDTSVIEMALVEALQKKLMAFTLQ 741

Query: 1925 DLVCIRCNQVKAAHLAEQCACAGSFRCKEDASDFRSKMQIFLNIANRQGFQLLQECTSWI 1984
            DL+C++C  VK A++   C+CAG+F        F  ++ IF NIA   G   L E   W+
Sbjct: 742  DLICLKCRGVKEANMPVFCSCAGAFALTIRTKVFMEQIGIFQNIAQHYGMSYLMETLEWL 801

Query: 1985 LE 1986
            L+
Sbjct: 802  LQ 803


>gi|74200255|dbj|BAE22929.1| unnamed protein product [Mus musculus]
          Length = 863

 Score =  321 bits (823), Expect = 3e-84,   Method: Compositional matrix adjust.
 Identities = 200/613 (32%), Positives = 323/613 (52%), Gaps = 78/613 (12%)

Query: 1442 LARYAHILWISDDGVPDLGGTSEEDECFA---DEVHQPVLTYPGAYRKVSVELKIHHLSV 1498
            L  + H+LW+S    PDLGG   +D       D+     +   G Y  V VEL I +L+V
Sbjct: 256  LQHHNHLLWLSPTSRPDLGGKEADDNRLVMEFDDRATVEINSSGCYSTVCVELDIQNLAV 315

Query: 1499 NALLKSNQVNEMEGGGLFG--FD-------QDMNSG-PYNNELCGFDETTSSAPAFRVVK 1548
            N +L+S+ VN+MEG G  G  FD       +DM +G    + L  +DET   +  FR++K
Sbjct: 316  NTILQSHHVNDMEGAGSMGISFDVIQQASLEDMVTGNQAASALANYDETALCSSTFRILK 375

Query: 1549 QLIQRCLTDAVTSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEF 1608
             ++   + +     N++AD  + H YRWL SP S LHDP LHR LH +M+K+F  L+AEF
Sbjct: 376  SMVVGWVKEITQYHNIYADNQVMHFYRWLQSPCSLLHDPALHRTLHNMMKKLFLQLIAEF 435

Query: 1609 RKLGATIIFANFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLF 1668
            ++LG+++++ANF+++I+ T K  +  A AY + +  ++ ++E+F  + +     W  LL+
Sbjct: 436  KRLGSSVVYANFNRIILCTKKRRIEDALAYVEYITNSIHSKEIFHSLTISFSRCWEFLLW 495

Query: 1669 MDQYNYGGIPARADESL------DDDSQV--------------------------DIV-S 1695
            MD  NYGGI  +   S+      + DSQ                           D++ +
Sbjct: 496  MDPSNYGGIKGKVPSSIHCGQVKEQDSQAREETDEEEEDKEKDEEEEGMGESEVEDLLEN 555

Query: 1696 SWNIAEYLPK--EIQDHFVLVVSEFMYIPWKHAQK-----LAASRASLQEGSSCTPSITV 1748
            +WNI ++LP+    Q +F+++VS ++   ++  ++        S    ++G+S     + 
Sbjct: 556  NWNILQFLPQAASCQSYFLMIVSAYIVAVYQSMKEELRHSAPGSTPVKRKGASQFSQESE 615

Query: 1749 AAAENFESHIV---QYVKGEIS-SYFTGKLLSIVRDAIHHMKKMNNDQHNS-PGVM---Q 1800
             A  +    I     YV  E++ S+FT      +   I   KK+   ++ + P  M    
Sbjct: 616  GATGSLPGMITFSQDYVANELTQSFFT------ITQKIQ--KKVTGSRNTTEPSEMFPVL 667

Query: 1801 TAANIHKVDAPLEFIKHVCAAFALDQNVQHDVLVMRKNLLKYVRVREFAPEAEFRDPCPS 1860
              +++   +  LEFIK+VC   +LD N+ + V  + ++LL+ V V EF+ EA+FRDPC S
Sbjct: 668  PGSHLLLNNPALEFIKYVCKVLSLDTNITNQVNKLNRDLLRLVDVGEFSEEAQFRDPCHS 727

Query: 1861 FILPNVICSYCNDCRDLDLCRDM------ALLAQDWHCAMPQCGQPYDREVMENALLQIV 1914
            ++LP VIC  CN CRDLDLC+D       A+L Q W C+   C  PYD   +E+AL++ +
Sbjct: 728  YVLPEVICHSCNFCRDLDLCKDSSFSQDGAILPQ-WLCS--NCQAPYDSSAIESALVEAL 784

Query: 1915 RQRERLYHLQDLVCIRCNQVKAAHLAEQCACAGSFRCKEDASDFRSKMQIFLNIANRQGF 1974
            +++   + LQDLVC++C  +K  H+   C+CAG F        F  +++IF NIA     
Sbjct: 785  QRKLMAFTLQDLVCLKCRGMKETHMPVYCSCAGDFTLTIRTEVFMEQIRIFQNIAKYYSM 844

Query: 1975 QLLQECTSWILEV 1987
              LQE   W+L+ 
Sbjct: 845  SYLQETIEWLLQT 857


>gi|14043221|gb|AAH07599.1| Unknown (protein for IMAGE:3347229), partial [Homo sapiens]
 gi|56584977|gb|AAH87613.1| POLE protein, partial [Homo sapiens]
          Length = 797

 Score =  313 bits (802), Expect = 6e-82,   Method: Compositional matrix adjust.
 Identities = 192/609 (31%), Positives = 306/609 (50%), Gaps = 70/609 (11%)

Query: 1442 LARYAHILWISDDGVPDLGGTSEEDECFA---DEVHQPVLTYPGAYRKVSVELKIHHLSV 1498
            L R+ H+LW+S    PDLGG   +D C     D+     +   G Y  V VEL + +L+V
Sbjct: 188  LQRHNHLLWLSPTARPDLGGKEADDNCLVMEFDDQATVEINSSGCYSTVCVELDLQNLAV 247

Query: 1499 NALLKSNQVNEMEGGGLFGFDQD----------MNSGPYNNELCGFDETTSSAPAFRVVK 1548
            N +L+S+ VN+MEG    G   D          +  G   +    +DET   +  FR++K
Sbjct: 248  NTILQSHHVNDMEGADSMGISFDVIQQASLEDMITGGQAASAPASYDETALCSNTFRILK 307

Query: 1549 QLIQRCLTDAVTSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEF 1608
             ++   + +     N++AD  + H YRWL SP S LHDP LHR LH +M+K+F  L+AEF
Sbjct: 308  SMVVGWVKEITQYHNIYADNQVMHFYRWLRSPSSLLHDPALHRTLHNMMKKLFLQLIAEF 367

Query: 1609 RKLGATIIFANFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLF 1668
            ++LG+++I+ANF+++I+ T K  +  A AY + +  ++ ++E F  + +     W  LL+
Sbjct: 368  KRLGSSVIYANFNRIILCTKKRRVEDAIAYVEYITSSIHSKETFHSLTISFSRCWEFLLW 427

Query: 1669 MDQYNYGGIPARADESLD---DDSQV-------------------------------DIV 1694
            MD  NYGGI  +    +     DSQ                                D++
Sbjct: 428  MDPSNYGGIKGKVSSRIHCGLQDSQKAGGAEDEQENEDDEEERDGEEEEEAEESNVEDLL 487

Query: 1695 -SSWNIAEYLPK--EIQDHFVLVVSEFMYIPWKHAQKLAASRASLQEGSSCTPSITVAAA 1751
             ++WNI ++LP+    Q++F+++VS ++ +   H  K    R++   GS+       +  
Sbjct: 488  ENNWNILQFLPQAASCQNYFLMIVSAYI-VAVYHCMKDGLRRSA--PGSTPVRRRGASQL 544

Query: 1752 ENFESHIVQYVKGEIS---SYFTGKLLSIVRDAIHHMKKMNNDQHNSPGVMQT-----AA 1803
                   V  + G I+    Y   +L          ++K      NS  + +       +
Sbjct: 545  SQEAEGAVGALPGMITFSQDYVANELTQSFFTITQKIQKKVTGSRNSTELSEMFPVLPGS 604

Query: 1804 NIHKVDAPLEFIKHVCAAFALDQNVQHDVLVMRKNLLKYVRVREFAPEAEFRDPCPSFIL 1863
            ++   +  LEFIK+VC   +LD N+ + V  + ++LL+ V V EF+ EA+FRDPC S++L
Sbjct: 605  HLLLNNPALEFIKYVCKVLSLDTNITNQVNKLNRDLLRLVDVGEFSEEAQFRDPCRSYVL 664

Query: 1864 PNVICSYCNDCRDLDLCRDM------ALLAQDWHCAMPQCGQPYDREVMENALLQIVRQR 1917
            P VIC  CN CRDLDLC+D       A+L Q W C+   C  PYD   +E  L+++++++
Sbjct: 665  PEVICRSCNFCRDLDLCKDSSFSEDGAVLPQ-WLCS--NCQAPYDSSAIEMTLVEVLQKK 721

Query: 1918 ERLYHLQDLVCIRCNQVKAAHLAEQCACAGSFRCKEDASDFRSKMQIFLNIANRQGFQLL 1977
               + LQDLVC++C  VK   +   C+CAG F        F  ++ IF NIA   G   L
Sbjct: 722  LMAFTLQDLVCLKCRGVKETSMPVYCSCAGDFALTIHTQVFMEQIGIFRNIAQHYGMSYL 781

Query: 1978 QECTSWILE 1986
             E   W+L+
Sbjct: 782  LETLEWLLQ 790


>gi|332840869|ref|XP_003314083.1| PREDICTED: DNA polymerase epsilon catalytic subunit A-like [Pan
            troglodytes]
          Length = 876

 Score =  307 bits (786), Expect = 5e-80,   Method: Compositional matrix adjust.
 Identities = 190/609 (31%), Positives = 304/609 (49%), Gaps = 70/609 (11%)

Query: 1442 LARYAHILWISDDGVPDLGGTSEEDECFADEVHQPV---LTYPGAYRKVSVELKIHHLSV 1498
            L R+ H+LW+S    PDLGG   +D     E        +   G Y  V VEL + +L+V
Sbjct: 267  LQRHNHLLWLSPTARPDLGGKEADDNYLVMEFDDQATVEINSSGCYSTVCVELDLQNLAV 326

Query: 1499 NALLKSNQVNEMEGGGLFGFDQD----------MNSGPYNNELCGFDETTSSAPAFRVVK 1548
            N +L+S+ VN+MEG    G   D          +  G   +    +DET   +  FR++K
Sbjct: 327  NTILQSHHVNDMEGADSMGISFDVIQQASLEDMITGGQAASAPASYDETALCSNTFRILK 386

Query: 1549 QLIQRCLTDAVTSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEF 1608
             ++   + +     N++AD  + H YRWL SP S LHDP LHR LH +M+K+F  L+AEF
Sbjct: 387  SMVVGWVKEITQYHNIYADNQVMHFYRWLRSPSSLLHDPALHRTLHNMMKKLFLQLIAEF 446

Query: 1609 RKLGATIIFANFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLF 1668
            ++LG+++I+ANF+++I+ T K  +  A AY + +  ++ ++E+F  + +     W  LL+
Sbjct: 447  KRLGSSVIYANFNRIILCTKKRRVEDAIAYVEYITSSIHSKEIFHSLTISFSRCWEFLLW 506

Query: 1669 MDQYNYGGIPARADESLD---DDSQV-------------------------------DIV 1694
            MD  NYGGI  +    +     DSQ                                D++
Sbjct: 507  MDPSNYGGIKGKVSSRIHCGLQDSQKAGGAEDEQENEDDEEERDGEEEEEAEESNVEDLL 566

Query: 1695 -SSWNIAEYLPK--EIQDHFVLVVSEFMYIPWKHAQKLAASRASLQEGSSCTPSITVAAA 1751
             ++WNI ++LP+    Q++F+++VS ++ +   H  K    R++   GS+       +  
Sbjct: 567  ENNWNILQFLPQAASCQNYFLMIVSAYI-VAVYHCMKDGLRRSA--PGSTPVRRRGASQL 623

Query: 1752 ENFESHIVQYVKGEIS---SYFTGKLLSIVRDAIHHMKKMNNDQHNSPGVMQT-----AA 1803
                   V  + G I+    Y   +L          ++K      NS  + +       +
Sbjct: 624  SQEAEGAVGALPGMITFSQDYVANELTQSFFTITQKIQKKVTGSRNSTELSEMFPVLPGS 683

Query: 1804 NIHKVDAPLEFIKHVCAAFALDQNVQHDVLVMRKNLLKYVRVREFAPEAEFRDPCPSFIL 1863
            ++   +  LEFIK+VC   +LD N+ + V  + ++LL+ V V EF+ EA+FRDPC S++L
Sbjct: 684  HLLLNNPALEFIKYVCKVLSLDTNITNQVNKLNRDLLRLVDVGEFSEEAQFRDPCRSYVL 743

Query: 1864 PNVICSYCNDCRDLDLCRDM------ALLAQDWHCAMPQCGQPYDREVMENALLQIVRQR 1917
            P VIC  CN CRDLDLC+D       A+L Q W C+   C  PYD   +E  L+++++++
Sbjct: 744  PEVICRSCNFCRDLDLCKDSSFSEDGAVLPQ-WLCS--NCQAPYDSSAIEMTLVEVLQKK 800

Query: 1918 ERLYHLQDLVCIRCNQVKAAHLAEQCACAGSFRCKEDASDFRSKMQIFLNIANRQGFQLL 1977
               + LQDLVC++C  VK   +   C+CAG F        F  ++ IF NIA       L
Sbjct: 801  LMAFTLQDLVCLKCRGVKETSMPVYCSCAGDFALTIHTQVFMEQIGIFRNIAQHYSMSYL 860

Query: 1978 QECTSWILE 1986
             E   W+L+
Sbjct: 861  LETLEWLLQ 869


>gi|405959765|gb|EKC25759.1| DNA polymerase epsilon catalytic subunit A [Crassostrea gigas]
          Length = 1248

 Score =  304 bits (778), Expect = 4e-79,   Method: Compositional matrix adjust.
 Identities = 188/615 (30%), Positives = 303/615 (49%), Gaps = 88/615 (14%)

Query: 1442 LARYAHILWISDDGVPDLGGTSEEDECFADEVHQPV---LTYPGAYRKVSVELKIHHLSV 1498
            L +  H+LW S    PDLGG   +D     E+ +     +  PG +  V VEL I  L+V
Sbjct: 646  LQKNNHVLWCSPTERPDLGGKEADDNRLCMELEESTSVEVNNPGTFPTVCVELGISSLAV 705

Query: 1499 NALLKSNQVNEMEGGGLFGFD-----------QDMNSGPYNNELCGFDETTSSAPAFRVV 1547
            N +++S  VN+ EG     FD           Q   +  Y   L  +DET   + +FR++
Sbjct: 706  NTIIESAHVNDQEGASAVSFDTLPQSSLEEMVQGQGAATY---LASYDETALCSTSFRIL 762

Query: 1548 KQLIQRCLTDAVTSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAE 1607
            K ++   + D     N+FAD  + H YRWL S ++ L+DP L R LH +M+KVF  L++E
Sbjct: 763  KTMVHGWVRDVTLYNNIFADNQIIHFYRWLRSSNALLYDPALRRTLHNMMKKVFLQLISE 822

Query: 1608 FRKLGATIIFANFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLL 1667
            F++LG+ +++ NF+++I+ T K  L  A  Y + +  +++TR+LF+ +E+     W  L+
Sbjct: 823  FKRLGSNVVYGNFNRLILCTKKRRLVDALGYVEYITNSIKTRDLFKLVEMSYEQCWEYLM 882

Query: 1668 FMDQYNYGGIPAR--ADESLD---------------------------------DDSQVD 1692
            ++D  N+GG+  +  ++  L+                                 D+ + +
Sbjct: 883  WLDPANHGGVKGKLPSESPLEQTQPDPEKEGGPDSEEEGEETEREEREVLNRSEDEDEPE 942

Query: 1693 IVSSWNIAEYLPKE--IQDHFVLVVSEFMYIPWKHAQKLAASRASLQEGSSCTPSIT-VA 1749
            I  +WNI  +LP+    Q +F L+V+ ++   +   Q         +E    TP  T V 
Sbjct: 943  IEMNWNIMHFLPEAGACQTNFNLIVAGYILSVYNQLQ---------EEQKVQTPGNTPVK 993

Query: 1750 AAENFESH-IVQYVKGEISSYFTGKLLS--------IVRDAIH----HMKKMNNDQHNSP 1796
               N +S  +V+      S  F  +L++        ++   IH    H+  M+ +  N P
Sbjct: 994  RRHNSQSQKVVETTTTPQSVTFAQELVAGDLAQQMFLLTQKIHKKFGHISDMSGEFPNRP 1053

Query: 1797 GVMQTAANIHKVDAPLEFIKHVCAAFALDQNVQHDVLVMRKNLLKYVRVREFAPEAEFRD 1856
            G     +++   +  LEFIK VC   +LD N+   V+ ++++LLK + + EFA EA F D
Sbjct: 1054 G-----SHLSMQNPALEFIKCVCKVLSLDSNINLQVIKLKRDLLKLIGIGEFAEEAAFSD 1108

Query: 1857 PCPSFILPNVICSYCNDCRDLDLCRDMALLAQ----DWHCAMPQCGQPYDREVMENALLQ 1912
            PC S++LP VIC  CN  RDLDLCRD  L  +     W C   QC  PYD + +E+ LL 
Sbjct: 1109 PCLSYVLPEVICKSCNHIRDLDLCRDPYLSQERSDSSWSCV--QCKAPYDMDEIEDTLLD 1166

Query: 1913 IVRQRERLYHLQDLVCIRCNQVKAAHLAEQCACAGSFRCKEDASDFRSKMQIFLNIANRQ 1972
             + ++   + LQDL C++CN +K  ++ + C CAG F     A+D    +  F  IA   
Sbjct: 1167 AIHRKSMAFILQDLKCVKCNGIKENNMRKYCRCAGDFTNTVPAADLYKTLMTFRGIARHY 1226

Query: 1973 GFQLLQECTSWILEV 1987
               LL     WIL++
Sbjct: 1227 EMVLLMGTVDWILKM 1241



 Score =  223 bits (568), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 131/399 (32%), Positives = 213/399 (53%), Gaps = 43/399 (10%)

Query: 1029 LSDFLGDTMVKDKGLRCQYIVACEPQGTPVSERAVPVAIFETDAEIMKFYLRKWCKTSS- 1087
            L  FLGD MVKD GL C Y+++ +P+G PV+ERA+P+AIF+ +  + K YLRKW K+ S 
Sbjct: 23   LLQFLGDQMVKDAGLNCHYVISKKPEGAPVTERAIPLAIFQAEPSVTKHYLRKWLKSPSL 82

Query: 1088 -DVGIRSIVDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLYKKVREKEDKFR 1146
             D GIR I+DW YY +RL   +QKIITIPAA+Q+V+NPVPRV HP WL+KK+ E+ D F+
Sbjct: 83   TDFGIREILDWEYYIERLGGCVQKIITIPAALQQVANPVPRVPHPPWLHKKLMERNDVFK 142

Query: 1147 QRKLVDIFSSLKKDDFLNKTCNAETNLMDE------NVEDLEDFPKKRRNSVNGPRPIVR 1200
            Q+K+ +IF+  ++     +  ++E  L  +      +V D+ED    ++ + NG   IV 
Sbjct: 143  QKKISEIFAPAQRKK--TEEISSERELFSQEDEQTPSVTDMEDMMNFKKPT-NG---IVL 196

Query: 1201 CFEVNNEQKTVKTTDQVDSLRQQLEPSEVSDQQPSSQNAIDTENIDRIVDYKGWLELKKR 1260
              +   ++ ++  ++     +      E+    P   N  +        + K WLE  K+
Sbjct: 197  SHKRKRDRSSIGDSEASQDSQGSQTWREILGTPPPMGNTKE--------ERKVWLEYHKK 248

Query: 1261 KW----KDNLDR-RKKQKLGSLRASHQANGVSESLGDMINHKEAQRRTGVGSYFRRQETA 1315
            KW    KD  +R R++ + G +       G                ++G+  + RR   +
Sbjct: 249  KWQLQAKDRTERKRRRVEFGDVPTGTYLGG---------------NKSGLSGFLRRTARS 293

Query: 1316 MTRCHWQIIQLVPSSQSGVFLAWVVVEGIMVRIPITVPRLFYLNSKDPI-VEKFPGRRVN 1374
            +    WQI+QL+ +   G F  W ++   +  + + VPR+FY+N + P   E    ++V 
Sbjct: 294  IMDMPWQIVQLMETGHPGQFKLWALIGNDLHAMKVNVPRIFYVNQRTPKEGEGAMWKKVI 353

Query: 1375 KTLPHGRRSFNLIEVMIDEDQFRKESKKLAALLADPEVE 1413
            KTLP       L E  + ED + +   +++A L+ P++E
Sbjct: 354  KTLPRSHPVMYLYEYSVPEDVYEEHINEISADLSSPDIE 392


>gi|238599285|ref|XP_002394839.1| hypothetical protein MPER_05209 [Moniliophthora perniciosa FA553]
 gi|215464518|gb|EEB95769.1| hypothetical protein MPER_05209 [Moniliophthora perniciosa FA553]
          Length = 333

 Score =  296 bits (758), Expect = 8e-77,   Method: Compositional matrix adjust.
 Identities = 135/228 (59%), Positives = 182/228 (79%), Gaps = 2/228 (0%)

Query: 936  ELKGFEIKRRGELKLIKVFQAELFDKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIAD 995
            ELKGFE+KRRGEL+LIK+FQ++LF+KFL G+T EECY+AVA VA++WLD+L ++  D+ D
Sbjct: 1    ELKGFEVKRRGELQLIKIFQSQLFEKFLLGTTTEECYAAVAEVADQWLDILFSKAVDLED 60

Query: 996  SELIDYISESSTMSKSLADYGEQKSCAVTTARRLSDFLGDTMVKDKGLRCQYIVACEPQG 1055
             EL++ I+E+ +MSK+LA+YG QKS +++TARRL++FLGD MVKDKGL C++I++  P G
Sbjct: 61   EELVELIAENRSMSKTLAEYGGQKSTSISTARRLAEFLGDQMVKDKGLACKFIISARPVG 120

Query: 1056 TPVSERAVPVAIFETDAEIMKFYLRKWCKTSS--DVGIRSIVDWSYYKQRLSSAIQKIIT 1113
             PV+ERA+PVAIF  +  + + YLRKW K +S  D  +RSI+DW YY +RL S IQK+IT
Sbjct: 121  APVTERAIPVAIFSAEESVKRTYLRKWLKDNSLVDFDLRSILDWQYYIERLGSVIQKLIT 180

Query: 1114 IPAAMQKVSNPVPRVVHPDWLYKKVREKEDKFRQRKLVDIFSSLKKDD 1161
            IPAAMQKVSNPVPR+ HPDWL+++V  + DKF+Q KL D F    + D
Sbjct: 181  IPAAMQKVSNPVPRIHHPDWLHRRVANQVDKFKQNKLTDFFKPAGEQD 228


>gi|159154996|gb|AAI54500.1| LOC553405 protein [Danio rerio]
          Length = 565

 Score =  286 bits (731), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 180/572 (31%), Positives = 296/572 (51%), Gaps = 84/572 (14%)

Query: 1487 VSVELKIHHLSVNALLKSNQVNEMEGGGLFG--FD-------QDMNSGPYN-NELCGFDE 1536
            V VEL I  L+VN +L+S  VN+MEGG   G  FD       ++M SG    N +  +DE
Sbjct: 5    VCVELDIQSLAVNTILQSQHVNDMEGGASIGVSFDVIQHASLEEMMSGNQGANAVASYDE 64

Query: 1537 TTSSAPAFRVVKQLIQRCLTDAVTSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKV 1596
            T   +  FR++K ++   + +     NV+AD  + H YRWL SP S L+DP LHR L  +
Sbjct: 65   TALCSNTFRILKSMVVGWVREITQYHNVYADNQVMHFYRWLRSPSSLLYDPALHRTLLNM 124

Query: 1597 MQKVFAMLLAEFRKLGATIIFANFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIE 1656
            M+K+F  L+AEF++LG+++I+ NF+++I+ T K  +  A AY + +  ++ T+E+F  + 
Sbjct: 125  MKKIFLQLVAEFKRLGSSVIYGNFNRLILCTKKRRIDDAIAYVEYITNSIHTKEIFHSLS 184

Query: 1657 LEPVHFWHSLLFMDQYNYGGIPARADESL---DDDSQVD--------------------- 1692
            +     W  LL+MD  N GG+  +   SL   + DS+                       
Sbjct: 185  ITFSRCWEFLLWMDPANCGGVKGKLPSSLLYGEHDSEKKKKDGAEEDGSDDEDEHEENQE 244

Query: 1693 --------------IVSSWNIAEYLPK--EIQDHFVLVVSEFMYIPWKHA---------- 1726
                          I S+WNI +YLP+    Q +F++++S ++   +             
Sbjct: 245  EDEEQDREEDVEDLIESNWNIMQYLPQTASCQKYFLMIISAYIAAVYHSMRQELRRNAPG 304

Query: 1727 ----QKLAASRASLQEGSSCTPSITVAAAENFESHIVQYVKGEIS-SYFTGKLLSIVRDA 1781
                ++  A++AS Q      PS  V+A     +   +YV  E++ ++FT  +   ++  
Sbjct: 305  ATPIKRRGATQASQQ------PSGDVSALPGLITFSQEYVSSELTQNFFT--ITQKIQKK 356

Query: 1782 IHHMKKMNNDQHNSPGVMQTAANIHKVDAPLEFIKHVCAAFALDQNVQHDVLVMRKNLLK 1841
            +   + +       P  +   +++   +  LEFIK+VC   +LD N+ + V  ++++LL+
Sbjct: 357  VSSTRSVTLPSEMFP--VLPGSHLPLNNPALEFIKYVCQVLSLDANIVNQVNKLKRDLLR 414

Query: 1842 YVRVREFAPEAEFRDPCPSFILPNVICSYCNDCRDLDLCRDMALLAQD------WHCAMP 1895
             V V EF+ +A+FRDPC S++LP VIC +CN CRDLDLC+D A ++QD      W C+  
Sbjct: 415  LVDVGEFSEDAQFRDPCKSYVLPEVICHHCNFCRDLDLCKDPA-VSQDGSVLPQWFCS-- 471

Query: 1896 QCGQPYDREVMENALLQIVRQRERLYHLQDLVCIRCNQVKAAHLAEQCACAGSFRCKEDA 1955
             C   YD E +E AL++ ++++   Y LQD+ C +C  VK A++   C+CAG F      
Sbjct: 472  NCQAQYDTESIEMALVEALQKKLMSYTLQDVECAKCKGVKEANMPLYCSCAGDFNLTFTT 531

Query: 1956 SDFRSKMQIFLNIANRQGFQLLQECTSWILEV 1987
              F  ++++F NIA       L E   WI+ +
Sbjct: 532  KSFSEQVEVFRNIAAHYNMSFLLETIDWIISM 563


>gi|70946101|ref|XP_742800.1| DNA polymerase epsilon, catalytic subunit a [Plasmodium chabaudi
           chabaudi]
 gi|56521980|emb|CAH76257.1| DNA polymerase epsilon, catalytic subunit a, putative [Plasmodium
           chabaudi chabaudi]
          Length = 587

 Score =  285 bits (730), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 142/305 (46%), Positives = 203/305 (66%), Gaps = 7/305 (2%)

Query: 184 QDFLDCIVDLREYDVPYHIRFAIDNDVRCGQWYDVS-ISSTGPLLEKRVDLLQR---AEV 239
           ++ +  I++L EYDV Y  R  ID ++RCG WY V+ +       E   ++L++   A +
Sbjct: 283 EEIMSEIIELYEYDVKYTTRLCIDKNIRCGLWYKVTRLEDELYTEEIYFEVLKKEILAPL 342

Query: 240 HVCAFDIETTKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFE 299
           +V A+DIE  K  LKFPD + D I++ISYM + QGYLI+NR  + ++I +  Y P  E+ 
Sbjct: 343 NVLAWDIECYKDELKFPDKEKDEIILISYMYNAQGYLIVNRNVMSKNIREFLYKPNNEYS 402

Query: 300 G--YFKVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEEL 357
           G   FK+ N  NE  LL+ +  H++ ++  I+VTYNGD+FD P+L  R   +   + +E+
Sbjct: 403 GAGTFKIFNEQNEYFLLKRFIEHIKLLRIHIFVTYNGDFFDIPYLYRRCEINNISIPKEI 462

Query: 358 GFQCDKNQGECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVR 417
           GF  + N+ EC   F  ++D + WV+RDSYLP GS+ LK+V K KL Y+P EV+PE MV 
Sbjct: 463 GFVMN-NKKECSCNFILNIDAYKWVERDSYLPNGSRTLKSVCKIKLKYNPTEVDPELMVP 521

Query: 418 FAKEKPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLM 477
            A+  PQ +A YSVSDAVAT+YLY  ++H F+F+L +IIPM+PD VLR+GSGTLCE LLM
Sbjct: 522 IARNNPQHLAVYSVSDAVATFYLYDKFIHSFLFALCSIIPMNPDNVLRQGSGTLCEQLLM 581

Query: 478 VQAYK 482
            +AYK
Sbjct: 582 AEAYK 586



 Score = 62.8 bits (151), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 44/159 (27%), Positives = 82/159 (51%), Gaps = 14/159 (8%)

Query: 17  QKLIRSAEEELEAKLGYDLFSEGDKRLGWLLTFASSSL----EDEDTRKVYSCIDLYFVS 72
           +KLI+     LE K     + +  ++ G+L     +++    +D    +  + + +YFVS
Sbjct: 23  EKLIK-----LEDKFKIKTWIDKGEKEGYLYNIVPTTMSVLVKDSSKTQKKTGVHMYFVS 77

Query: 73  QDGSTFKSKYKFRPYFYAATKEKMEMD-VEAYLRRRYESQIADIEILEKEDLDLKNHL-- 129
            +  T++    +RPYFY  TK     + V  YL++       +IE ++K+D+ L +HL  
Sbjct: 78  DNNKTWRLTLFYRPYFYLKTKNIYNYEAVSNYLKKELGKYNVEIEFVKKDDISLFDHLNK 137

Query: 130 --SGLHKSYLKISFDTVQQLMDVKKDLLHVVERNQAKFD 166
             S L+  + K+SFDT++ L+  +  L  ++ERN+   D
Sbjct: 138 KRSYLNNIFFKLSFDTIENLVRSRSFLEKIIERNKKSKD 176


>gi|328349847|emb|CCA36247.1| DNA polymerase epsilon subunit 1 [Komagataella pastoris CBS 7435]
          Length = 394

 Score =  282 bits (721), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 134/345 (38%), Positives = 216/345 (62%), Gaps = 15/345 (4%)

Query: 16  KQKLIRSAEEELEAKLGYDLFSEGDKRLGWLLTFASSSLEDEDTRKVYSCIDLYFVSQDG 75
           K  L++ A++ +++  G+D +  G K++GWL+   ++++  ED  + YS +D YF+ ++G
Sbjct: 46  KLSLVQEADQ-IDSVFGFDRYESGPKKVGWLINMHTTTIPSEDLLQGYSGVDYYFLDEEG 104

Query: 76  STFKSKYKFRPYFYAATKEKMEMDVEAYLRRRYESQIADIEILEKEDLDLKNHLSGLHKS 135
             FK   ++ PYF+   K+  E +VE YLR++ E  +     +EK+DL L NHL GL ++
Sbjct: 105 GGFKVTKQYDPYFFVICKKSYESEVEEYLRKQLEGLLKKASRVEKDDLSLPNHLIGLKRT 164

Query: 136 YLKISFDTVQQLMDVKKDLLHVVERNQAKFDAAEAYESILT-------------GKREQR 182
            +++SF  +  L++ ++ +  +V++NQ   +  + Y S L               + + +
Sbjct: 165 LIQLSFHNISNLLEARRIIAPIVKQNQLFKEQRDVYNSDLNYNLLNEEEDLDFNTESKSK 224

Query: 183 PQDFLDCIVDLREYDVPYHIRFAIDNDVRCGQWYDVSISSTGPL-LEKRVDLLQRAEVHV 241
           P D   C+ D+REYDVPYH+R +IDN+ R G+WY +  + +  +   +  D +  A+  +
Sbjct: 225 PLDIAHCLEDIREYDVPYHVRVSIDNNYRIGKWYTLEATDSAQVSFTEMKDKIAFADPVI 284

Query: 242 CAFDIETTKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGY 301
            AFDIETTK PLKFPD+  D IMMISYM+DG+G+LI NRE +  +IED EYTPKPE+ G 
Sbjct: 285 LAFDIETTKAPLKFPDSSIDQIMMISYMIDGEGFLITNREIINAEIEDFEYTPKPEYPGL 344

Query: 302 FKVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRA 346
           F + N  +E  L+  +F H++EV+P +  T+NGD+FDWPF+E RA
Sbjct: 345 FTIFNEPDEKALIERFFEHIREVRPTVIATFNGDFFDWPFVEKRA 389


>gi|62531229|gb|AAH93432.1| LOC553405 protein [Danio rerio]
          Length = 539

 Score =  265 bits (678), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 168/550 (30%), Positives = 281/550 (51%), Gaps = 84/550 (15%)

Query: 1509 EMEGGGLFG--FD-------QDMNSGPYN-NELCGFDETTSSAPAFRVVKQLIQRCLTDA 1558
            +MEGG   G  FD       ++M SG    N +  +DET   +  FR++K ++   + + 
Sbjct: 1    DMEGGASIGVSFDVIQHASLEEMMSGNQGANAVASYDETALCSNTFRILKSMVVGWVREI 60

Query: 1559 VTSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEFRKLGATIIFA 1618
                NV+AD  + H YRWL SP S L+DP LHR L  +M+K+F  L+AEF++LG+++I+ 
Sbjct: 61   TQYHNVYADNQVMHFYRWLRSPSSLLYDPALHRTLLNMMKKIFLQLVAEFKRLGSSVIYG 120

Query: 1619 NFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLFMDQYNYGGIP 1678
            NF+++I+ T K  +  A AY + +  ++ T+E+F  + +     W  LL+MD  N GG+ 
Sbjct: 121  NFNRLILCTKKRRIDDAIAYVEYITNSIHTKEIFHSLSITFSRCWEFLLWMDPANCGGVK 180

Query: 1679 ARADESL---DDDSQVD-----------------------------------IVSSWNIA 1700
             +   SL   + DS+                                     I S+WNI 
Sbjct: 181  GKLPSSLLYGEHDSEKKKKDGAEEDGSDDEDEHEENQEEDEEQDREEDVEDLIESNWNIM 240

Query: 1701 EYLPK--EIQDHFVLVVSEFMYIPWKHA--------------QKLAASRASLQEGSSCTP 1744
            +YLP+    Q +F++++S ++   +                 ++  A++AS Q      P
Sbjct: 241  QYLPQTASCQKYFLMIISAYIAAVYHSMRQELRRNAPGATPIKRRGATQASQQ------P 294

Query: 1745 SITVAAAENFESHIVQYVKGEIS-SYFTGKLLSIVRDAIHHMKKMNNDQHNSPGVMQTAA 1803
            S  V+A     +   +YV  E++ ++FT  +   ++  +   + +       P  +   +
Sbjct: 295  SGDVSALPGLITFSQEYVSSELTQNFFT--ITQKIQKKVSSTRSVTLPSEMFP--VLPGS 350

Query: 1804 NIHKVDAPLEFIKHVCAAFALDQNVQHDVLVMRKNLLKYVRVREFAPEAEFRDPCPSFIL 1863
            ++   +  LEFIK+VC   +LD N+ + V  ++++LL+ V V EF+ +A+FRDPC S++L
Sbjct: 351  HLPLNNPALEFIKYVCQVLSLDANIVNQVNKLKRDLLRLVDVGEFSEDAQFRDPCKSYVL 410

Query: 1864 PNVICSYCNDCRDLDLCRDMALLAQD------WHCAMPQCGQPYDREVMENALLQIVRQR 1917
            P VIC +CN CRDLDLC+D A ++QD      W C+   C   YD E +E AL++ ++++
Sbjct: 411  PEVICHHCNFCRDLDLCKDPA-VSQDGSVLPQWFCS--NCQAQYDTESIEMALVEALQKK 467

Query: 1918 ERLYHLQDLVCIRCNQVKAAHLAEQCACAGSFRCKEDASDFRSKMQIFLNIANRQGFQLL 1977
               Y LQD+ C +C  VK A++   C+CAG F        F  ++++F NIA       L
Sbjct: 468  LMSYTLQDVECAKCKGVKEANMPLYCSCAGDFNLTFTTKSFSEQVEVFRNIAAHYNMSFL 527

Query: 1978 QECTSWILEV 1987
             E   WI+ +
Sbjct: 528  LETIDWIISM 537


>gi|16769898|gb|AAL29168.1| SD09005p [Drosophila melanogaster]
          Length = 711

 Score =  261 bits (667), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 176/560 (31%), Positives = 287/560 (51%), Gaps = 39/560 (6%)

Query: 1442 LARYAHILWISDDGVPDLGGTSEEDECFADEVHQPVLTY---PGAYRKVSVELKIHHLSV 1498
            L R+  +LW S    PDLGG   +D     E  + +       G Y  V VEL +  L+V
Sbjct: 159  LQRHNFVLWWSASTRPDLGGREADDSRLLAEFEESISVVQNKAGFYPDVCVELALDSLAV 218

Query: 1499 NALLKSNQVNEMEGGG-LFGFD-------QDMNSGPYNNELCGFDETTSSAPAFRVVKQL 1550
            +ALL+S ++ EMEG      FD       ++M        L  +DET   + AFRV++ +
Sbjct: 219  SALLQSTRIQEMEGASSAITFDVMPQVSLEEMIGTVPAATLPSYDETALCSAAFRVMRSM 278

Query: 1551 IQRCLTDAVTSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEFRK 1610
            +   L +   + N+F+D  + H YRW+ S ++ L+DP L R L+ +M+K+F  ++AEF++
Sbjct: 279  VNGWLREVSINRNIFSDFQIVHFYRWVRSSNALLYDPALRRSLNNLMRKMFLRIIAEFKR 338

Query: 1611 LGATIIFANFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLFMD 1670
            LGATII+A+F+++I+ +GK  +S A  Y D ++++L+ +E+F  I+L     W+ +L+MD
Sbjct: 339  LGATIIYADFNRIILSSGKKTVSDALGYVDYIVQSLRNKEMFHSIQLSFEQCWNFMLWMD 398

Query: 1671 QYNYGGIPARADESLDDDSQVDIVSSWNIAEYLPKEIQDHFVLVVSEFMY-IPWKHAQKL 1729
            Q N+ GI  +  + + D++   IVS+  I +    +  D      SE    +    A++ 
Sbjct: 399  QANFSGIRGKLPKGI-DETVSSIVSTTMIRDSERNQDDDEDEEEDSENRDPVESNEAEQD 457

Query: 1730 AASRASLQEGSSCTPSIT--VAAAENFESHIVQYVKGEISSYFTGKLLSIVR----DAIH 1783
                 SL+   +    +       E FES +  +++       T + +  +     D I 
Sbjct: 458  QEDELSLELNWTIGEHLPDENECREKFESLLTLFMQSLAEKKTTEQAIKDISHCAFDFIL 517

Query: 1784 HMKKMNNDQHNSPGVMQTAANIHKVDAPLEFIKHVCAAFALDQNVQHDVLVMRKNLLKYV 1843
             + K       SPG              LE I+ +  A ++D+ +   +  +R+N+L+ V
Sbjct: 518  KLHKNYGKGKPSPG--------------LELIRTLIKALSVDKTLAEQINELRRNMLRLV 563

Query: 1844 RVREFAPEAEFRDPCPSFILPNVICSYCNDCRDLDLCRDMALLAQD----WHCAMPQCGQ 1899
             + EF+  AE+ DPC S I+  VIC  CN CRDLDLC+D     +D    W CA  QC  
Sbjct: 564  GIGEFSDLAEWEDPCDSHIINEVICKACNHCRDLDLCKDKHRAMKDGVPVWLCA--QCYV 621

Query: 1900 PYDREVMENALLQIVRQRERLYHLQDLVCIRCNQVKAAHLAEQCACAGSFRCKEDASDFR 1959
             YD E +E  +L  ++++   Y LQDL C RC+++K  +LAE C CAG+F       D +
Sbjct: 622  AYDNEEIEMRMLDALQRKMMSYVLQDLRCSRCSEIKRENLAEFCTCAGNFVPLISGKDIQ 681

Query: 1960 SKMQIFLNIANRQGFQLLQE 1979
            + +  F  +A     QLLQ+
Sbjct: 682  TLLGTFNKVAANHKMQLLQQ 701


>gi|193787430|dbj|BAG52636.1| unnamed protein product [Homo sapiens]
          Length = 496

 Score =  252 bits (644), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 154/492 (31%), Positives = 251/492 (51%), Gaps = 57/492 (11%)

Query: 1546 VVKQLIQRCLTDAVTSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLL 1605
            ++K ++   + +     N++AD  + H YRWL SP S LHDP LHR LH +M+K+F  L+
Sbjct: 4    ILKSMVVGWVKEITQYHNIYADNQVMHFYRWLRSPSSLLHDPALHRTLHNMMKKLFLQLI 63

Query: 1606 AEFRKLGATIIFANFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHS 1665
            AEF++LG+++I+ANF+++I+ T K  +  A AY + +  ++ ++E F  + +     W  
Sbjct: 64   AEFKRLGSSVIYANFNRIILCTKKRRVEDAIAYVEYITSSIHSKETFHSLTISFSRCWEF 123

Query: 1666 LLFMDQYNYGGIPARADESLD---DDSQV------------------------------- 1691
            LL+MD  NYGGI  +    +     DSQ                                
Sbjct: 124  LLWMDPSNYGGIKGKVSSRIHCGLQDSQKAGGAEDEQENEDDEEERDGEEEEEAEESNVE 183

Query: 1692 DIV-SSWNIAEYLPK--EIQDHFVLVVSEFMYIPWKHAQKLAASRASLQEGSSCTPSITV 1748
            D++ ++WNI ++LP+    Q++F+++VS ++ +   H  K    R++   GS+       
Sbjct: 184  DLLENNWNILQFLPQAASCQNYFLMIVSAYI-VAVYHCMKDGLRRSA--PGSTPVRRRGA 240

Query: 1749 AAAENFESHIVQYVKGEIS---SYFTGKLLSIVRDAIHHMKKMNNDQHNSPGVMQT---- 1801
            +         V  + G I+    Y   +L          ++K      NS  + +     
Sbjct: 241  SQLSQEAEGAVGALPGMITFSQDYVANELTQSFFTITQKIQKKVTGSRNSTELSEMFPVL 300

Query: 1802 -AANIHKVDAPLEFIKHVCAAFALDQNVQHDVLVMRKNLLKYVRVREFAPEAEFRDPCPS 1860
              +++   +  LEFIK+VC   +LD N+ + V  + ++LL+ V V EF+ EA+FRDPC S
Sbjct: 301  PGSHLLLNNPALEFIKYVCKVLSLDTNITNQVNKLNRDLLRLVDVGEFSEEAQFRDPCRS 360

Query: 1861 FILPNVICSYCNDCRDLDLCRDM------ALLAQDWHCAMPQCGQPYDREVMENALLQIV 1914
            ++LP VIC  CN CRDLDLC+D       A+L Q W C+   C  PYD   +E  L++++
Sbjct: 361  YVLPEVICRSCNFCRDLDLCKDSSFSEDGAVLPQ-WLCS--NCQAPYDSSAIEMTLVEVL 417

Query: 1915 RQRERLYHLQDLVCIRCNQVKAAHLAEQCACAGSFRCKEDASDFRSKMQIFLNIANRQGF 1974
            +++   + LQDLVC++C  VK   +   C+CAG F        F  ++ IF NIA   G 
Sbjct: 418  QKKLMAFTLQDLVCLKCRGVKETSMPVYCSCAGDFALTIHTQVFMEQIGIFRNIAQHYGM 477

Query: 1975 QLLQECTSWILE 1986
              L E   W+L+
Sbjct: 478  SYLLETLEWLLQ 489


>gi|260819554|ref|XP_002605101.1| hypothetical protein BRAFLDRAFT_84229 [Branchiostoma floridae]
 gi|229290432|gb|EEN61111.1| hypothetical protein BRAFLDRAFT_84229 [Branchiostoma floridae]
          Length = 540

 Score =  252 bits (643), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 163/553 (29%), Positives = 265/553 (47%), Gaps = 94/553 (16%)

Query: 1510 MEGGGLFGFDQDMNSGPYNNE-----------LCGFDETTSSAPAFRVVKQLIQRCLTDA 1558
            MEGG       D    P+  E           L  +DET   +  FR++K ++   L D 
Sbjct: 1    MEGGAGSSISFDTIQQPFLEEMIAGQNTPGANLASYDETALCSGTFRILKSMVYGWLRDV 60

Query: 1559 VTSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEFRKLGATIIFA 1618
                NV+AD  +   YRWL +P + L+DP L R LH +M+K+F  L++EF++LG+ ++FA
Sbjct: 61   THYNNVYADYQIMQFYRWLGTPSATLYDPALRRTLHTMMKKLFLQLVSEFKRLGSIVVFA 120

Query: 1619 NFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLFMDQYNYGGIP 1678
            NF+K+++ T K  +  A AY + +  ++++RELF  +++ P   W  L+++D  N+GG+ 
Sbjct: 121  NFNKIVVCTKKRRVEDALAYVEYITNSIRSRELFHGVDITPQKCWDILMWLDPANHGGMK 180

Query: 1679 ARADESL---DDDSQ----------------------------VDIVS-----------S 1696
                +S    DDD Q                            VD+             +
Sbjct: 181  VEIPKSFLHEDDDGQNEREGQEKDGEDAEEEEEEENRDQEEEGVDLAEEEDDDEQPVEMN 240

Query: 1697 WNIAEYLPKE--IQDHFVLVVSEFMYIPWKHAQ--------------KLAASRASLQEGS 1740
            WN+  YLP+    Q +F +VV+ ++    KH Q              +   S++  Q G 
Sbjct: 241  WNLMYYLPEAAACQYNFSMVVAGYISNLHKHMQAEMRRAMPGNTPVRRRGGSQSQTQVGD 300

Query: 1741 SCTPSITVAAAENFESHIVQYVKGEISSYFTGKLLSIVRDAIHHMKKMNNDQHNSPGVMQ 1800
            S T   TV  A+       + V GE++    G +   +   I   +   +     P +  
Sbjct: 301  SSTTPSTVHYAQ-------ELVAGEMAQKLYG-ITQKIHKKIAGTRSRTDPAEEFPSL-- 350

Query: 1801 TAANIHKVDAPLEFIKHVCAAFALDQNVQHDVLVMRKNLLKYVRVREFAPEAEFRDPCPS 1860
              +++   +  LEF+       +LD N+ + V  +R++LLK + V +F+ +AEF+DP  S
Sbjct: 351  PGSHLPLNNPALEFV------LSLDSNITNQVNKLRRDLLKLIGVGDFSEQAEFKDPSLS 404

Query: 1861 FILPNVICSYCNDCRDLDLCRDMALLAQD------WHCAMPQCGQPYDREVMENALLQIV 1914
            +ILP VIC  CN CRD+DLC+D  LL QD      W C    CG  YD + +E++L+  +
Sbjct: 405  YILPEVICKVCNYCRDIDLCKD-PLLVQDGTAAPAWQCC--HCGSQYDVDAIEHSLVSSL 461

Query: 1915 RQRERLYHLQDLVCIRCNQVKAAHLAEQCACAGSFRCKEDASDFRSKMQIFLNIANRQGF 1974
             ++   + LQDL C++C  VK  +L   C CAG F        F  K++IF NIA     
Sbjct: 462  HKKSMAFVLQDLQCLKCKGVKDLNLPIYCKCAGDFTNTIGVQQFAEKLRIFRNIARHYSM 521

Query: 1975 QLLQECTSWILEV 1987
             +L++   W +++
Sbjct: 522  AVLEDTVEWFVQM 534


>gi|356551219|ref|XP_003543975.1| PREDICTED: uncharacterized protein LOC100792022 [Glycine max]
          Length = 558

 Score =  249 bits (637), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 122/161 (75%), Positives = 129/161 (80%), Gaps = 22/161 (13%)

Query: 723 FYVDTVRSFRDRRYEYKGLNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHKCIL 782
           F V    SFRDRRYEYKGLNK                      DMVVLYDSLQLAHKCIL
Sbjct: 390 FVVGYNVSFRDRRYEYKGLNK----------------------DMVVLYDSLQLAHKCIL 427

Query: 783 NSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLPGSF 842
           NSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLL+EKIGKPLELDTDGIWC LPGSF
Sbjct: 428 NSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLVEKIGKPLELDTDGIWCALPGSF 487

Query: 843 PENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLV 883
           PENFTFKT+D KK+ TISYPCV+LNVDVA NN+NDQYQ ++
Sbjct: 488 PENFTFKTRDPKKQFTISYPCVILNVDVAINNSNDQYQLVL 528


>gi|70935597|ref|XP_738862.1| hypothetical protein [Plasmodium chabaudi chabaudi]
 gi|56515414|emb|CAH79030.1| hypothetical protein PC000045.03.0 [Plasmodium chabaudi chabaudi]
          Length = 380

 Score =  246 bits (629), Expect = 8e-62,   Method: Compositional matrix adjust.
 Identities = 145/353 (41%), Positives = 206/353 (58%), Gaps = 40/353 (11%)

Query: 529 SFKLDPSAYEQLLNNLD--------RDLQYAIKVEGK--MDLESVSNYDEVKNAIMEKLL 578
           +F LD + Y+ LLNN+D        +DL   + +  K  ++ + + N + +KN I++KL 
Sbjct: 2   NFHLDGNTYKYLLNNVDNIIDFWIQKDLNKNLNINDKKYVNKKQILNLESIKNDIIQKLT 61

Query: 579 RLQEEPIREECPLIYHLDVAAMYPNIILTNRLQPPSIVTDEVCTACDFNRPGKTCLRKLE 638
              + P    CP IYHLDVAAMYPNIIL++RLQP +I+T + C  C + +    C +K+ 
Sbjct: 62  FFIQNPNISSCPNIYHLDVAAMYPNIILSHRLQPNAIITHDHCFNCSYYKQRHLCQKKMT 121

Query: 639 WVWRGEI------------------FMGKRSDYYHLKKQIESEFVDGTNGHLS------K 674
           W  + EI                      ++ Y+ ++   +SE     +G +       K
Sbjct: 122 WKRKLEISPIDYGHILSLKQDLKSRLFYPQAPYFKMENNEDSEST-SNDGMIKPVVNKKK 180

Query: 675 SFLDLPKMEQQSRLKDRLKKYCQKAYKRVLDKPVTELREAG-ICMRENSFYVDTVRSFRD 733
           S+ +L + +Q   L   +K+  QK +K+   K   E+  +  IC REN FYVDTV++FRD
Sbjct: 181 SWNELTEKQQHDELMKVIKECSQKVFKKT--KVAKEVDASSLICQRENPFYVDTVKTFRD 238

Query: 734 RRYEYK-GLNKVWKGKLSEAKASG-NSIKIQEAQDMVVLYDSLQLAHKCILNSFYGYVMR 791
           RRY YK GL +    +    K S  + +KI E  + ++L DSLQLAHKCILNSFYGYV R
Sbjct: 239 RRYVYKRGLKECEHERRELLKQSKIDYVKIHELDEKILLNDSLQLAHKCILNSFYGYVKR 298

Query: 792 KGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLPGSFPE 844
           K +RWYS +M  VVTYTG++II +A  LI+KIG P+ELDTDGIWC+LP  FPE
Sbjct: 299 KSSRWYSDQMGAVVTYTGSQIINDAFQLIDKIGIPMELDTDGIWCMLPKRFPE 351


>gi|70938258|ref|XP_739827.1| hypothetical protein [Plasmodium chabaudi chabaudi]
 gi|56517110|emb|CAH81758.1| hypothetical protein PC000801.04.0 [Plasmodium chabaudi chabaudi]
          Length = 503

 Score =  245 bits (626), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 125/304 (41%), Positives = 193/304 (63%), Gaps = 9/304 (2%)

Query: 866  LNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEFEVDGPYKAMILPASKEEGILIKKRY 925
            LN+++ +  TN QY  + +  +  Y+  S+  I FE+DGP+ +M LPAS++   L+KKRY
Sbjct: 1    LNMEMHKKWTNHQY-LVYNEKTNDYDCISKNEIFFELDGPWHSMFLPASEKSDDLLKKRY 59

Query: 926  AVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFLHGSTIEECYSAVAAVANRWLDL 985
             VFND   ++ELKGFEIKRRGEL++I+ FQ+E+F+ FL G T EE Y   +  AN+W +L
Sbjct: 60   VVFNDKYRISELKGFEIKRRGELRIIQKFQSEIFNNFLKGKTKEESYYYASLTANKWKNL 119

Query: 986  LDNQGKDIA-DSELIDYISESSTMSKSLADYGEQKSCAVTTARRLSDFLGDT-MVKDKGL 1043
            +D++  DI  D EL D I     ++KS+ +    KS  +TTA+RLS+ L +T  ++D  +
Sbjct: 120  MDSKAIDIENDDELFDLILAKKVLNKSVKEQPNAKSLGITTAKRLSELLSNTSYIEDNNV 179

Query: 1044 RCQYIVACEPQGTPVSERAVPVAIFETDAEIMKFYLRKWCKT----SSDVGIRSIVDWSY 1099
              Q+I+A +P G+ V+ RA+P+ IF+T+ +   FYL KW       ++ V +R I+DW Y
Sbjct: 180  STQFIIASKPMGSDVTFRAIPIQIFKTNVDTQIFYLSKWLGVQLPPNTPVNVRDIIDWDY 239

Query: 1100 YKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLYKKVREKEDKFRQRKLVDIFSSLKK 1159
            YKQ+L   I K++ IPA  Q ++NP+  +  PDWL K++   E+K  Q+K+   F   +K
Sbjct: 240  YKQKLEVQILKLVIIPAIKQNINNPITSISIPDWLEKQINISEEK--QKKITSFFVKKEK 297

Query: 1160 DDFL 1163
             + L
Sbjct: 298  PEML 301


>gi|149238686|ref|XP_001525219.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
            YB-4239]
 gi|146450712|gb|EDK44968.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
            YB-4239]
          Length = 1177

 Score =  243 bits (621), Expect = 7e-61,   Method: Compositional matrix adjust.
 Identities = 166/616 (26%), Positives = 293/616 (47%), Gaps = 65/616 (10%)

Query: 1415 LGWQQNAAKIGMQRCAASSQWFNERISLARYAHI-------------------------- 1448
            +GWQ   +K  +        W    I+L+RY  +                          
Sbjct: 581  VGWQVLISKRVINHYFVLGSWLQNLIALSRYGGVPLCNLQIENMSYLIDVEYARRLIENN 640

Query: 1449 --LWISDDGVPDLGGTSEEDECFADEVHQPVLTYPGAYRKVSVELKIHHLSVNALLKSNQ 1506
              LW S + +PD GG   +    ++ +  PV+  P  Y    +E++I  L++N +L S+ 
Sbjct: 641  IVLWWSPNPLPDHGGFENDKPINSESLKFPVINNPEVYETACLEVEIGTLTINTILTSSI 700

Query: 1507 VNEMEGGGLFGFDQDMNSGPYNNELCGFDETTSSAPAFRVVKQLIQRCLTDAVTSGNVFA 1566
            +NE EG  L     D      NN    F   + S PA  +++ +++    DA+ S N  A
Sbjct: 701  INEAEGTDL---ADDSVQYDNNNGAGSFAVDSFSTPALLILRAMVKDWWDDAL-SNNQSA 756

Query: 1567 DAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEFRKLGATIIFANFSKVIID 1626
            D+++  L  W+    S L+DP LH  +H +  K    L+ EF+K+G+ +IFAN +K+++ 
Sbjct: 757  DSVMNALIPWVQKKDSYLYDPALHYHVHNLSSKALLQLVNEFKKMGSQVIFANRTKLLLQ 816

Query: 1627 TGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLFMDQYNYGGIPARADESLD 1686
            T K  +  + AY   ++KA +++ LF +++L  V +W  L++MD++NYGG       S D
Sbjct: 817  TSKISVENSYAYGQYIIKAARSKPLFNFLDLRIVKYWDLLIWMDEFNYGGRCCPEIISAD 876

Query: 1687 DDSQVDIVSSWNIAEYLPKEIQDHFVLVVSEFMYIPWKHAQKLAASRASLQEGSSCTPSI 1746
            + + + + + W + +YLP   QD F   +  F+    ++ QK   +    Q G   TP I
Sbjct: 877  EQN-LTVENKWLLKKYLPVVFQDEFEDWIIIFLNALLQYKQK---TLMGTQSGG--TPRI 930

Query: 1747 TVAA-------------AENFESHIVQYVKGEISSYFTGKLLSIVR---DAIHHMKKMNN 1790
            T  A              E+ E  +   V  E       ++  + R   DAI  +     
Sbjct: 931  TQIAHILNGQKKLQNKELEHEEVDLTNGVAEEFRKPLLVRMEKLYRRQIDAI--LNPEFK 988

Query: 1791 DQHNSPGVMQTAANIHKVDAPLEFIKHVCAAFALDQNVQHDVLVMRKNLLKYVRVREFAP 1850
             ++  P +    ++I   +  LE +K +CA  +L +    ++ V+RK LL+   ++EF+ 
Sbjct: 989  KEYEFPKL--PGSHISLRNPALELVKFICAVLSLSKKRNIEIRVLRKELLQIFDIKEFSA 1046

Query: 1851 EAEFRDPCPSFILPNVICSYCNDCRDLDLCRDMALLAQDWHCAMPQCGQPYDREVMENAL 1910
            +A F +P  S ++P+VIC YCN  RD+D+CR+       W+C    C +P+++  +E  +
Sbjct: 1047 QANFINPATSLVIPHVICDYCNQVRDIDICREEE--GGVWNCTF--CHKPFNKVGLEEEI 1102

Query: 1911 LQIVRQRERLYHLQDLVCIRCNQVKAAHLAEQCACAGSFRCKEDASDFRSKMQIFLNIAN 1970
            +         Y+ QDL C +C+ ++  +L   C C+G++    + +D   ++ I+ N+AN
Sbjct: 1103 IAQFTHLFVEYYGQDLKCEKCSTIRKNNLDLFCKCSGNWVETINVADVDKQVHIYNNVAN 1162

Query: 1971 RQGFQLLQECTSWILE 1986
                QLL+    WI E
Sbjct: 1163 FYNLQLLK---GWIEE 1175



 Score =  201 bits (512), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 131/424 (30%), Positives = 218/424 (51%), Gaps = 58/424 (13%)

Query: 993  IADSELIDYISESSTMSKSLADYGEQKSCAVTTARRLSDFLGDTMVKDKGLRCQYIVACE 1052
            + D +LI+ I E+ +MSKSLA+YG+QKS ++TTA+RL +FLG+ MVKD GL  +YI++ +
Sbjct: 2    LEDEDLIELICENRSMSKSLAEYGDQKSTSITTAKRLGEFLGEEMVKDAGLATKYIISAK 61

Query: 1053 PQGTPVSERAVPVAIFETDAEIMKFYLRKWCKTSS--DVGIRSIVDWSYYKQRLSSAIQK 1110
            P G PV+ERA+PV+IF ++ +  + +++KW K  S      + ++DW YY +RL+S +QK
Sbjct: 62   PIGAPVTERAIPVSIFSSEKK--EIFMKKWMKDPSMTKFSPKDVIDWDYYYERLASVVQK 119

Query: 1111 IITIPAAMQKVSNPVPRVVHPDWLYKKVREKEDKFRQRKLVDIFSSLKKDDFLNKTCNAE 1170
            IITIPAA+Q V NPVPRV HPDWL K++  +    +Q  +   F++  KD          
Sbjct: 120  IITIPAALQNVKNPVPRVPHPDWLKKRIDNQGSSKQQSSIAKFFNAGTKD---------- 169

Query: 1171 TNLMDENVEDLEDFPKKRRNSVNGPRPIVRCFEVNNEQKTVKTTDQVDSLRQQLEPSEVS 1230
                +  V D+EDF      S+           ++N +K  K  +   SL Q++E  E  
Sbjct: 170  ----ESKVRDIEDFGGLDTESIRT--------NLDNLRKKRKARNA--SLVQEMEEREER 215

Query: 1231 DQQPSSQNAIDTENIDRIV-DYKGWLELKKRKWKDNLDRRKKQKLGSLRASHQANGVSES 1289
            +Q      A+   +   I  DY G+L+ +K KW                 S QA+G    
Sbjct: 216  NQ------ALLNGSCPSIADDYTGFLQYQKAKW-----------------SLQASGRERK 252

Query: 1290 LGDMINHKEAQRRTGVGSYFRRQETAMTRCHWQIIQLVPSS-QSGVFLAWVVVEGIMVRI 1348
                 +  ++ +R+ VG  F++Q   +    W+I++      + G    +V     +   
Sbjct: 253  RKLFGSQAQSSQRSTVGGMFKKQAENVAGTDWEILEYKEDPMKPGDLKVYVSAAEKIHTF 312

Query: 1349 PITVPRLFYLNSKDPIVEK--FPG---RRVNKTLPHGRRSFNLIEVMIDEDQFRKESKKL 1403
               VP+  + + K P+  +   PG    +    LP+G    NL ++ + + +++ +   +
Sbjct: 313  TFHVPKKVFASFKTPLSSRQSIPGCITEKSTAILPNGHDGSNLYKLTMPQSEYQDQISNV 372

Query: 1404 AALL 1407
             +LL
Sbjct: 373  ESLL 376


>gi|380481472|emb|CCF41823.1| DNA polymerase epsilon catalytic subunit A, partial [Colletotrichum
            higginsianum]
          Length = 1080

 Score =  242 bits (618), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 169/627 (26%), Positives = 294/627 (46%), Gaps = 72/627 (11%)

Query: 1408 ADPEVEVLGWQQNAAKIGMQRCAASSQWFNERISLARYAHI------------------- 1448
            AD  +  LGWQ   A+  +        W     +LARY  +                   
Sbjct: 466  ADSSLPPLGWQAVVARRLVGHYLGLGSWIVHLNTLARYGEVPLCNLEREDPRFLIDIAYA 525

Query: 1449 ---------LWISDDGVPDLGGTSEEDECFADE-VHQPVLTYPGAYRKVSVELKIHHLSV 1498
                     LW S    PD  G  ++D     E V  P    PG +  V ++L++ +L++
Sbjct: 526  RRLQNNNVVLWWSAGPRPDHAGHEKDDITGPLETVQMPATNNPGTFSSVCIDLEVRNLAI 585

Query: 1499 NALLKSNQVNEMEGGGLFGFDQDMNSGPYNNELCGFDETTSSAPAFRVVKQLIQRCLTDA 1558
            N +L S+ +N++EG     F+   +     +E+   + T ++A    V++++++    +A
Sbjct: 586  NTILTSSLINDLEGSESISFNPAGDGNAAGDEVISSEGTFANAGVL-VLREMVKSWWQEA 644

Query: 1559 VTSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEFRKLGATIIFA 1618
               G+  AD ++QHL RW+ +P S L+D  LH  +  + +K F  L+A+FR++G+ +IFA
Sbjct: 645  C-KGSAMADVMVQHLVRWVENPDSFLYDRALHYYVQMMSRKAFQQLMADFRRVGSQVIFA 703

Query: 1619 NFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLFMDQYNYGGIP 1678
            N +++++ T K ++  A AY   ++K+++++ LF +I+LE   +W  L++ D++NYGG  
Sbjct: 704  NSNRLLLQTTKAEVGTAFAYSQYIIKSIKSKPLFHFIDLEIKEYWDYLVWYDEFNYGG-- 761

Query: 1679 ARADESLDDDSQ-VDIVSSWNIAEYLPKEIQDHFVLVVSEFMYIPWKHAQKLAASRASLQ 1737
                E ++ + Q +D V  W +A +LP  +Q  F   V EF+       Q +   +  L 
Sbjct: 762  KACQEVVEAEQQTLDTVMHWQMATFLPIRLQPTFQDWVIEFI-------QLMHNLKRPLN 814

Query: 1738 EGSSCTPSITV----AAAENFESHIV------QYVKGEISSYFTGKLLSIVRDAIHHMKK 1787
               S TP +T     + AE  E  I+      + +K +I++    +     R+ +H    
Sbjct: 815  GDPSSTPRLTQLPQKSLAEGAEGQIILGKAFEKPLKKDIANLINLQ----KRELLHPELA 870

Query: 1788 MNNDQHNSPGVMQTAANIHKVDAPLEFIKHVCAAFALDQNVQHDVLVMRKNLLKYVRVRE 1847
             +    + PG   T  ++   +A LE +K +    +LD+N+  +  ++RK LL    VRE
Sbjct: 871  EDYSFPHLPGSHLT--HLSSRNAVLELVKALMQVLSLDKNITLEARLLRKELLAMFDVRE 928

Query: 1848 FAPEAEFRDPCPSFILPNVICSYCNDCRDLDLCRDMALLAQ-------------DWHCAM 1894
            F+ E  F++P  S  +  + C  C   RDLD CRD  LL +              W C  
Sbjct: 929  FSKEGAFQNPSESLKVIQLSCDSCTMARDLDFCRDEDLLPEMGPDGKRLSPETRPWRCTF 988

Query: 1895 PQCGQPYDREVMENALLQIVRQRERLYHLQDLVCIRCNQVKAAHLAEQCACAGSFRCKED 1954
              C   YDR  +E  LL  V      +  QDL C +C  ++   L + C C+G +     
Sbjct: 989  --CEAEYDRNAIEEMLLARVEAFVVEWTTQDLKCGKCGALRMNELMDHCTCSGEWVESVR 1046

Query: 1955 ASDFRSKMQIFLNIANRQGFQLLQECT 1981
             +D   ++ +F N+A   G ++L E T
Sbjct: 1047 RADIVRRLGVFWNVAKFYGLKMLLEVT 1073



 Score =  120 bits (302), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 98/312 (31%), Positives = 154/312 (49%), Gaps = 51/312 (16%)

Query: 1110 KIITIPAAMQKVSNPVPRVVHPDWLYKKVREKEDKFRQRKLVDIFSSLKKDDFLNKTCNA 1169
            K+ITIPAA+QKV NPVPRV HPDWL +++  K+DK +Q+KL D+F+    +D  N T  +
Sbjct: 1    KLITIPAALQKVRNPVPRVAHPDWLQRRINIKDDKMKQKKLTDLFAKGPLEDITNPTVIS 60

Query: 1170 ETNLMDENVEDLEDFPKKRRNSVNGPRPIVRCFEVNNEQKTVKTTDQVDSLRQQLEPSEV 1229
                      D+EDF  +    +  P+P+     V + Q    T+ +    R+   P+E 
Sbjct: 61   AA--------DMEDFGSQ----LLKPKPVTSV--VASSQPAAPTSQK----RKSPGPAEN 102

Query: 1230 SDQQPSSQNAIDTENIDRIVDYKGWLELKKRKWKDNLDR--RKKQKLGSLRASHQANGVS 1287
            +D  P +  A+  E      DY G+L+ +K+KWK       R++Q  G  R ++Q N   
Sbjct: 103  AD--PFA--ALPKEMPSPSDDYVGFLQYQKQKWKIQKQARIRRRQLFGDRRGNNQNN--- 155

Query: 1288 ESLGDMINHKEAQRRTGVGSYFRRQETAMTRCHWQIIQLVPSSQSGVFLAWVVVEGIMVR 1347
                             + + F +Q        WQ++ L P+   G+  A V+++  +  
Sbjct: 156  -----------------IQNTFMKQAHMTFMNTWQLLHLKPTETPGIVNAHVLIDAKIHS 198

Query: 1348 IPITVPRLFYLNSKD---PIVEKFPG---RRVNKTLPHGRRSFNLIEVMIDEDQFRKESK 1401
            + I VPR  +LN K    P V+  PG    +VN TLP+G  S +L ++ + ED +  E+ 
Sbjct: 199  LKIKVPRQVFLNLKSGEMPDVD-IPGCEVEQVNHTLPNGHSSVHLFKLTVPEDVYFAEAD 257

Query: 1402 KLAALLADPEVE 1413
            K + L   P VE
Sbjct: 258  KFSLLFNHPSVE 269


>gi|154278269|ref|XP_001539951.1| predicted protein [Ajellomyces capsulatus NAm1]
 gi|150413536|gb|EDN08919.1| predicted protein [Ajellomyces capsulatus NAm1]
          Length = 821

 Score =  241 bits (614), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 170/607 (28%), Positives = 297/607 (48%), Gaps = 53/607 (8%)

Query: 1408 ADPEVEVLGWQQNAAKIGMQRCAASSQWFNERISLARYAHILWISDDGVPDLGGTSEEDE 1467
            +D ++  LGWQ   AK       A   W         Y  +LW S   +PD  G  E+D+
Sbjct: 238  SDNDLPPLGWQPFVAKQITMHYLALGSWL--------YHLVLWWSPSPLPDHAGY-EKDD 288

Query: 1468 CFA--DEVHQPVLTYPGAYRKVSVELKIHHLSVNALLKSNQVNEMEGG--GLFGFDQDMN 1523
                  +V  P    PGAY  V +EL+I +L++N +L S+ +NE+EG    L        
Sbjct: 289  ILGPMQKVDMPSSNNPGAYSSVCIELEIRNLAINTILTSSLINELEGSESTLLNPVAPNE 348

Query: 1524 SGPYNNELCGFDETTSSAPAFRVVKQLIQRCLTDAVTSGNVFADAILQHLYRWLCSPHSK 1583
            +G  +     + +T  ++    V++ L++    +A   GN  AD ++QHL RW+ S  S 
Sbjct: 349  TGASDGTGVLYSDTAFASAGILVLRDLVKSWWAEAC-QGNGMADIMVQHLIRWVESSDSF 407

Query: 1584 LHDPVLHRILHKVMQKVFAMLLAEFRKLGATIIFANFSKVIIDTGKFDLSAAKAYCDSLL 1643
            L+D  LH  +  + +K F  L+ +FR++G+ IIFA+ S++++ T K +++ A AY   ++
Sbjct: 408  LYDRSLHYHVQMMSKKAFQQLMTDFRRMGSQIIFASPSRLLLQTTKGEVANAYAYSQYIV 467

Query: 1644 KALQTRELFEWIELEPVHFWHSLLFMDQYNYGGIPARADESLDDDSQ-VDIVSSWNIAEY 1702
            K+++ + LF +++LE   +W  L++ D++N+GG      E ++ ++Q ++ V  W ++++
Sbjct: 468  KSIKEKPLFHFLDLEIKEYWDYLVWYDEFNFGG--KGCQEVVETENQELETVMHWQLSKF 525

Query: 1703 LPKEIQDHFVLVVSEFMYIPWKHAQKLAASRASLQEGSSCTPSITVAAAENFESHIVQYV 1762
            LP  +Q  F+  V E  YI   H  K    R ++    +  P  T      F+S I +  
Sbjct: 526  LPTPLQTVFLDWVVE--YIELMHGLK----RPTIDNEGADPPRATQLP---FQS-ITESD 575

Query: 1763 KGEISSYFTGKLLSIVRDAIHHMKKMNNDQ------------HNSPGVMQTAANIHKVDA 1810
             GE++S  T      ++  I  + +   D+               PG    A+  H+ + 
Sbjct: 576  SGEMTSILTESFSKPLKRQIAGLIRRQRDELLHPELASDYVFPTLPGASWRASK-HERNP 634

Query: 1811 PLEFIKHVCAAFALDQNVQHDVLVMRKNLLKYVRVREFAPEAEFRDPCPSFILPNVICSY 1870
             LE +K +    +L +    +  ++R+ LL    V+EF+ E  F +P  S   P +IC++
Sbjct: 635  TLELVKSLMQVLSLCKTTTLETRLLRRELLALFEVKEFSDEGRFENPSGSLKFPQLICNH 694

Query: 1871 CNDCRDLDLCRDMALLAQD-----------WHCAMPQCGQPYDREVMENALLQIVRQRER 1919
            C   RDLD+CRD  LL ++           W C    C   YDR  +E  L+  V+    
Sbjct: 695  CTMTRDLDICRDGDLLPENSADNIAAGSNPWCCL--SCATEYDRLALEERLIGQVQGLVV 752

Query: 1920 LYHLQDLVCIRCNQVKAAHLAEQCACAGSFRCKEDASDFRSKMQIFLNIANRQGFQLLQE 1979
             +  QDL C +C  ++ +   E C+C+GS+    D S  + K+ +F ++A   G ++L  
Sbjct: 753  EWQTQDLKCSKCKSLRVSEFMEHCSCSGSWVATVDLSGIKKKLSLFKSVAEFYGLRMLTT 812

Query: 1980 CTSWILE 1986
             T+ +LE
Sbjct: 813  VTNGVLE 819


>gi|238612026|ref|XP_002398111.1| hypothetical protein MPER_01343 [Moniliophthora perniciosa FA553]
 gi|215473987|gb|EEB99041.1| hypothetical protein MPER_01343 [Moniliophthora perniciosa FA553]
          Length = 277

 Score =  239 bits (611), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 129/274 (47%), Positives = 161/274 (58%), Gaps = 35/274 (12%)

Query: 563 VSNYDEVKNAIMEKLLRLQEEPIREECPLIYHLDVAAMYPNIILTNRLQPPSIVTDEVCT 622
           V+NYDEVK+ I   L  L++ P R + PLIYHLDVAAMYPNI+L+NRLQP S+V + VC 
Sbjct: 2   VTNYDEVKSEIQAALEILRDNPKRTDNPLIYHLDVAAMYPNIMLSNRLQPDSMVDESVCA 61

Query: 623 ACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYYHLKKQIESE-FVDGTNGHLSKSFLDLPK 681
            CD+NRPGKTC R+LEW WRGE F   R +Y  ++  +  E F     G L + + DL  
Sbjct: 62  VCDYNRPGKTCDRRLEWAWRGEFFPAHRDEYNMIRHALNQESFPAKRPGGLQRRYADLTP 121

Query: 682 MEQQSRLKDRLKKYCQKAYKRVLDKPVTELREAGICMRENSFYVDTVRSFRDRRYEYKGL 741
            EQ + L  RL  Y +K YK+  D  V E RE+ +C REN FYVDTVR FRDRRYEYKGL
Sbjct: 122 AEQTALLHKRLGDYSRKVYKKTKDTKV-ERRESIVCQRENPFYVDTVRRFRDRRYEYKGL 180

Query: 742 NKVWKGKLSEAKASGNSI-KIQEAQDMVVLYDSLQLAHKCILNSFYGYVMRKGARWYSME 800
           +K WK  L      G SI +++E + M+                                
Sbjct: 181 HKTWKKNLGNVVNEGRSIAEVEETKKMI-------------------------------- 208

Query: 801 MAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGI 834
           MAG+    GA IIQ AR L+E+IG+PLEL T GI
Sbjct: 209 MAGITCLCGATIIQMARALVEQIGRPLELHTHGI 242


>gi|260950577|ref|XP_002619585.1| hypothetical protein CLUG_00744 [Clavispora lusitaniae ATCC 42720]
 gi|238847157|gb|EEQ36621.1| hypothetical protein CLUG_00744 [Clavispora lusitaniae ATCC 42720]
          Length = 946

 Score =  237 bits (604), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 174/662 (26%), Positives = 305/662 (46%), Gaps = 69/662 (10%)

Query: 1362 DPIVEKFPGRRVNKTL-----PHGRRSFNLIEVMIDEDQFRKESKKLAALLADPEVEVLG 1416
            + +  KF   R NK L     P+  +  +L+E   D    +    +++       +  +G
Sbjct: 299  NSVFRKFHESRSNKALLSIQSPYCNKVLDLLEAASDFPTIKLSVGEIS-------LPAVG 351

Query: 1417 WQQNAAKIGMQRCAASSQWFNERISLARYAHI---------------------------- 1448
            WQ   AK  +    + + W     SL+ Y  +                            
Sbjct: 352  WQSLIAKRIVNHYFSLASWLKNMTSLSSYGKVPLCNLQIETPGYLIDIEYSRRLTQNNVV 411

Query: 1449 LWISDDGVPDLGGTSEEDECFADEVHQPVLTYPGAYRKVSVELKIHHLSVNALLKSNQVN 1508
            LW S+   PD GG   +     D      +  P  Y    +E++I +L++N +L S+ +N
Sbjct: 412  LWWSNKPYPDHGGFQNDHVQDFDNFDFITINSPEIYETACLEVEIGNLTINTILTSSLIN 471

Query: 1509 EMEGGGLFGFDQDMNSGPYNNELCGFDETTSSAPAFRVVKQLIQRCLTDAVTSGNVFADA 1568
            E EG  L     D   G  NN        T S  A  +++ +++    DAV S N  AD+
Sbjct: 472  EAEGTDL---SDDPLLGDANNGASTLALDTFSPVALGILRSMVKDWWDDAV-SNNANADS 527

Query: 1569 ILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEFRKLGATIIFANFSKVIIDTG 1628
            ++  L  W+    S L+D  LH  +H +  K    L+ EFR++ A ++FAN SK+II T 
Sbjct: 528  MMNSLVSWVQRQDSLLYDFTLHHHIHNLTSKALLQLVGEFRRMNANVVFANRSKLIIQTT 587

Query: 1629 KFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLFMDQYNYGGIPARADESLDDD 1688
            K  +  + A+   ++ A +++ LF +++L+ V +W  L++MD++N+ G     + + DD 
Sbjct: 588  KISVENSYAFGKYVVNATRSKPLFNFLDLKIVRYWDILVWMDEFNFAG-RCCTEITNDDV 646

Query: 1689 SQVDIVSSWNIAEYLPKEIQDHF--VLVVSEFMYIPWKHAQKLAASRASLQEGSSCTPSI 1746
             Q+  VS W+I ++LP   Q+ F   LV+       +K+   L +++   Q  +      
Sbjct: 647  QQLLPVSKWHIKKFLPIIFQNDFDDWLVIFLDALAKYKNETLLGSTQKGTQRVTQLAH-- 704

Query: 1747 TVAAAENFESHIVQYVKGEISSYFTGKLLSIVRDA----IHHMKKMNNDQHNSPGVMQ-- 1800
             +   +  +S+       E    FTG++++  R      I  + +  N+   +P + +  
Sbjct: 705  ILKGQQKMDSN-----DAEEEDQFTGEVMNNFRKPLQRRIEKLYRRQNESILNPEMAKEY 759

Query: 1801 ----TAANIHKVDAP-LEFIKHVCAAFALDQNVQHDVLVMRKNLLKYVRVREFAPEAEFR 1855
                   ++ K+  P LE +K +CA FAL +    +V ++RK+LL  + V+EF+PE+ F 
Sbjct: 760  EFPTLPGSVLKMKNPVLELVKFLCAVFALSKKRSIEVRMLRKDLLSVMDVKEFSPESIFS 819

Query: 1856 DPCPSFILPNVICSYCNDCRDLDLCRDMALLAQDWHCAMPQCGQPYDREVMENALLQIVR 1915
             P  S  + +VIC YC+  RD+D CR+       W C    C   Y++  +E  L+  + 
Sbjct: 820  SPSASLKVSSVICDYCSFIRDIDFCREEE--KNIWTCT--HCHHVYNKVFLEEELIAQLH 875

Query: 1916 QRERLYHLQDLVCIRCNQVKAAHLAEQCACAGSFRCKEDASDFRSKMQIFLNIANRQGFQ 1975
            +    Y  QD  C RC+ VKA +++E C C+G++       DF  ++ IF N+A   G +
Sbjct: 876  RNISKYLTQDYTCQRCHAVKADNMSEFCKCSGAWVETLKFDDFSKRVNIFRNVAKAYGMK 935

Query: 1976 LL 1977
            +L
Sbjct: 936  ML 937


>gi|226493233|ref|NP_001145877.1| uncharacterized protein LOC100279392 [Zea mays]
 gi|219884803|gb|ACL52776.1| unknown [Zea mays]
          Length = 213

 Score =  226 bits (577), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 96/121 (79%), Positives = 109/121 (90%)

Query: 280 RECVGEDIEDLEYTPKPEFEGYFKVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDW 339
           + CVGEDI+DL+YTPKPEFEGYF+V NV  E++LL+ WF+HMQEVKPGIYVTYN D+FDW
Sbjct: 48  KGCVGEDIDDLQYTPKPEFEGYFRVKNVQTELDLLKAWFSHMQEVKPGIYVTYNDDFFDW 107

Query: 340 PFLETRAAHHGFKMSEELGFQCDKNQGECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVT 399
           PFLE RAAHHG KM+EE+GFQCD NQGECRAKF+CHLDCFAWVKRDSYLPQGSQGLK   
Sbjct: 108 PFLEKRAAHHGIKMNEEIGFQCDNNQGECRAKFSCHLDCFAWVKRDSYLPQGSQGLKHTC 167

Query: 400 K 400
           +
Sbjct: 168 R 168


>gi|385301907|gb|EIF46065.1| dna-directed dna polymerase catalytic subunit a [Dekkera bruxellensis
            AWRI1499]
          Length = 924

 Score =  223 bits (568), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 158/553 (28%), Positives = 274/553 (49%), Gaps = 19/553 (3%)

Query: 1442 LARYAHILWISDDGVPDLGGTSEEDECF-ADEVHQ-PVLTYPGAYRKVSVELKIHHLSVN 1499
            L +   ILW S   +PD GG  ++   F +DE  Q P    P  Y  V +EL + +L++N
Sbjct: 374  LQKAGIILWWSPRPLPDYGGMEKDTTLFESDESLQFPHFNSPEIYETVCMELSLRNLTIN 433

Query: 1500 ALLKSNQVNEMEGGGLFGFDQDMNSGPYNNELCGFDETTSSAPAFRVVKQLIQRCLTDAV 1559
             +L S+ +NE EG  +    +  ++   +       + + S PA  V++ L++    DA+
Sbjct: 434  TVLTSSWINEAEGVFISETGERNDADGEDAGSSTLADDSFSGPALAVLRGLVRHWWDDAI 493

Query: 1560 TSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEFRKLGATIIFAN 1619
              GN  AD+++     W  S  S L+D  LH  +H + +K F  LL EF+++GA I+FA+
Sbjct: 494  -KGNSEADSMVHDFITWYSSSSSMLYDSSLHYHVHNLTKKSFVQLLGEFKRIGAGIVFAD 552

Query: 1620 FSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLFMDQYNYGGIPA 1679
             +K+I+ T K  +  + AY   L+ +++++ LF  +EL    +W  L++MD+YNY G   
Sbjct: 553  RNKIILRTSKTVVENSYAYGQYLISSVRSKPLFNLLELNVXRYWDMLIWMDKYNYAGSFC 612

Query: 1680 RADESLDDDSQVDIVSSWNIAEYLPKEIQDHFVLVVSEFMYIPWKHAQKLAASRASLQEG 1739
               +  + + + D VS+W I  YLP  +Q  F   V  F+    K  ++   S +S    
Sbjct: 613  NEIQG-EGEQKFDYVSNWQIKNYLPMIMQGEFEDWVILFLDAFIKDREREYNSGSSQSXL 671

Query: 1740 SSCTPSITVAAAE-------NFESHI-VQYVKGEISSYFTGKLLSIVRDAIHHMKKM--N 1789
            S     IT    +       N E  I +  +   +  YF   L+  V+  I    +M  +
Sbjct: 672  SPRRTQITQILKQHXFNNRRNGEEDIDMSEITNGVCEYFRSALIKRVKTLIRKQNEMLLD 731

Query: 1790 NDQHNSPGVMQTAANIHKVDAP-LEFIKHVCAAFALDQNVQHDVLVMRKNLLKYVRVREF 1848
            +         + A +   +B P LE +K +C   +L +    +V ++R+ LL    V+EF
Sbjct: 732  SAMQQEFEFPKLAGSHLPMBNPTLELVKFLCHILSLSKRRDIEVRILRRELLSLFEVKEF 791

Query: 1849 APEAEFRDPCPSFILPNVICSYCNDCRDLDLCRDMALLAQDWHCAMPQCGQPYDREVMEN 1908
            + EA F++P  S I+P  IC+YC+  +D+D+CRD       + C +  C + Y++ ++E 
Sbjct: 792  SDEAXFKNPSASLIIPQFICNYCDHTKDIDVCRDDE--ETIFRCDL--CHKAYNKLIIEE 847

Query: 1909 ALLQIVRQRERLYHLQDLVCIRCNQVKAAHLAEQCACAGSFRCKEDASDFRSKMQIFLNI 1968
             L+  + +    Y  QDL C +C ++K   ++  C C+G +          S+++ F N 
Sbjct: 848  RLIYELHRTITKYLTQDLRCNKCGRMKDKEISLHCQCSGDWVATISXKQALSRVKTFQNA 907

Query: 1969 ANRQGFQLLQECT 1981
            A+   FQLL+E T
Sbjct: 908  ADAYQFQLLREVT 920


>gi|355712635|gb|AES04414.1| polymerase , epsilon [Mustela putorius furo]
          Length = 183

 Score =  214 bits (545), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 97/172 (56%), Positives = 138/172 (80%), Gaps = 2/172 (1%)

Query: 985  LLDNQGKDIADSELIDYISESSTMSKSLADYGEQKSCAVTTARRLSDFLGDTMVKDKGLR 1044
            +L ++  ++ DSEL + ISE+ +MS+ L DYGEQKS +++TA+RL++FLGD MV+D GL 
Sbjct: 1    VLYSKAANMPDSELFELISENRSMSRKLEDYGEQKSTSISTAKRLAEFLGDQMVRDAGLS 60

Query: 1045 CQYIVACEPQGTPVSERAVPVAIFETDAEIMKFYLRKWCKTSS--DVGIRSIVDWSYYKQ 1102
            C+YI++ +P+G+PV+ERA+P+AIF+ +  + K +LRKW K+SS  D  IR+I+DW YY +
Sbjct: 61   CRYIISRKPEGSPVTERAIPLAIFQAEPTVRKHFLRKWLKSSSLQDFDIRTILDWDYYIE 120

Query: 1103 RLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLYKKVREKEDKFRQRKLVDIF 1154
            RL SAIQKIITIPAA+Q+V NPVPRV HPDWL+KK+ EK D  RQ+K+ ++F
Sbjct: 121  RLGSAIQKIITIPAALQQVKNPVPRVKHPDWLHKKLLEKSDVCRQKKISELF 172


>gi|70930595|ref|XP_737181.1| hypothetical protein [Plasmodium chabaudi chabaudi]
 gi|56512351|emb|CAH86820.1| hypothetical protein PC302172.00.0 [Plasmodium chabaudi chabaudi]
          Length = 277

 Score =  207 bits (526), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 121/273 (44%), Positives = 165/273 (60%), Gaps = 28/273 (10%)

Query: 683 EQQSRLKDRLKKYCQKAYKRVLDKPVTELREAG-ICMRENSFYVDTVRSFRDRRYEYK-G 740
           +Q   L   +K+  QK +K+   K   E+  +  IC REN FYVDTV++FRDRRY YK G
Sbjct: 8   QQHDELMKVIKECSQKVFKKT--KVAKEVDASSLICQRENPFYVDTVKTFRDRRYVYKRG 65

Query: 741 LNKVWKGKLSEAKASG-NSIKIQEAQDMVVLYDSLQLAHKCILNSFYGYVMRKGARWYSM 799
           L +    +    K S  + +KI E  + ++L DSLQLAHKCILNSFYGYV RK +RWYS 
Sbjct: 66  LKECEHERRELLKQSKIDYVKIHELDEKILLNDSLQLAHKCILNSFYGYVKRKSSRWYSD 125

Query: 800 EMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLPGSFPENFTFKTKD------- 852
           +M  VVTYTG++II +A  LI+KIG P+ELDTDGIWC+LP  FPE +     D       
Sbjct: 126 QMGAVVTYTGSQIINDAFQLIDKIGIPMELDTDGIWCMLPKRFPEIYDVYILDKNELNNI 185

Query: 853 -LKKKLT--------------ISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECS 897
            L + +T                +P  +LN+++ +  TN QY  + +  +  Y+  S+  
Sbjct: 186 KLYENMTEDEIKNNKNIKKTNFEFPTNILNMEMHKKWTNHQY-LVYNEKTNDYDCISKNE 244

Query: 898 IEFEVDGPYKAMILPASKEEGILIKKRYAVFND 930
           I FE+DGP+ +M LPAS++   L+KKRY VFND
Sbjct: 245 IFFELDGPWHSMFLPASEKSDDLLKKRYVVFND 277


>gi|347835686|emb|CCD50258.1| hypothetical protein [Botryotinia fuckeliana]
          Length = 510

 Score =  204 bits (519), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 142/529 (26%), Positives = 258/529 (48%), Gaps = 42/529 (7%)

Query: 1476 PVLTYPGAYRKVSVELKIHHLSVNALLKSNQVNEMEGGGLFGFDQDMNS--GPYNNELCG 1533
            P +  PG Y  V +EL + +L++N +L S+ +NE+EG     F+    S   P +     
Sbjct: 2    PSVNNPGTYPSVCIELDVRNLAINTILTSSLINELEGSDSISFNPAAPSDDAPSDGTNVL 61

Query: 1534 FDETTSSAPAFRVVKQLIQRCLTDAVTSGNVFADAILQHLYRWLCSPHSKLHDPVLHRIL 1593
            + E   +     V++++++   T+A   G+  AD ++QHL RW+ +P S L+D  LH  +
Sbjct: 62   YAENAFATAGVTVLREMVKAWWTEA-CRGSSMADIMVQHLVRWVENPDSFLYDRSLHYYV 120

Query: 1594 HKVMQKVFAMLLAEFRKLGATIIFANFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFE 1653
              + +K F  L+ +FR++G+ ++FAN +++++ T K ++  A AY   +LK+++ + LF 
Sbjct: 121  QMMSRKAFQQLMTDFRRVGSHVVFANSNRLLLQTTKAEVGNAYAYSQYILKSIKAKPLFH 180

Query: 1654 WIELEPVHFWHSLLFMDQYNYGGIPARADESLDDDSQ-VDIVSSWNIAEYLPKEIQDHFV 1712
            +++LE   +W  L++ D++NYGG      E ++ ++Q +D +  W ++ +LP ++Q  F 
Sbjct: 181  FLDLEIKEYWDYLVWYDEFNYGG--KGCSEVVEAENQALDNIMHWQLSNFLPDKLQQIFN 238

Query: 1713 LVVSEFMYIPWKHAQKLAASRASLQEGSSCTPSITVAAAENF----ESHIVQYVKGEISS 1768
              V EF+ I   H  K        + G   TP  T     N     E  I+      +  
Sbjct: 239  DWVLEFIDI--MHGLK------KPRLGIDSTPRATQIPVRNLGDDKEDKII------LGK 284

Query: 1769 YFTGKLLSIVRDAIHHMKKMNNDQHNSPGVMQ-------TAANIHKVDAPLEFIKHVCAA 1821
             F   L   +   I   K    D+   P + +         +++   +  LE +K +   
Sbjct: 285  SFEKPLKKQIAGIIRRQK----DEMLHPELAEDYKFPVLPGSHLKSTNPALELVKSLMQV 340

Query: 1822 FALDQNVQHDVLVMRKNLLKYVRVREFAPEAEFRDPCPSFILPNVICSYCNDCRDLDLCR 1881
             +LD+N+  +  ++RK LL+   +REF+  A+F++P  S  L +V+C  C   RD+D CR
Sbjct: 341  LSLDKNITLEARLLRKELLEMFEIREFSNAAKFQNPSTSAKLFSVVCDSCTTSRDMDFCR 400

Query: 1882 DMALL-----AQDWHCAMPQCGQPYDREVMENALLQIVRQRERLYHLQDLVCIRCNQVKA 1936
            D  LL     +  W C    C   ++   +E  ++  V      +  QDL C+RC  +K 
Sbjct: 401  DEDLLPNSEGSWSWKCLF--CNGEFEHLGIEERIIGEVMGCVGEWVGQDLKCVRCKGLKV 458

Query: 1937 AHLAEQCACAGSFRCKEDASDFRSKMQIFLNIANRQGFQLLQECTSWIL 1985
              L + C C G +    D  D + K++ +  +A   G ++L      +L
Sbjct: 459  NDLRQGCGCGGEWGESVDKGDVKMKVEGWGRVARSYGLRMLGAVVEEVL 507


>gi|332840873|ref|XP_509496.3| PREDICTED: DNA polymerase epsilon catalytic subunit A-like, partial
           [Pan troglodytes]
          Length = 106

 Score =  177 bits (449), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 84/105 (80%), Positives = 92/105 (87%), Gaps = 1/105 (0%)

Query: 767 MVVLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKP 826
           M VLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAG+V +TGA II  AR LIE+IG+P
Sbjct: 1   MEVLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGIVCFTGANIITQARELIEQIGRP 60

Query: 827 LELDTDGIWCVLPGSFPENFTFKTKDLKK-KLTISYPCVMLNVDV 870
           LELDTDGIWCVLP SFPENF FKT ++KK K+TISYP  MLN+ V
Sbjct: 61  LELDTDGIWCVLPNSFPENFVFKTTNVKKPKVTISYPGAMLNIMV 105


>gi|449689901|ref|XP_004212179.1| PREDICTED: DNA polymerase epsilon catalytic subunit A-like [Hydra
            magnipapillata]
          Length = 603

 Score =  177 bits (448), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 153/559 (27%), Positives = 241/559 (43%), Gaps = 110/559 (19%)

Query: 1442 LARYAHILWISDDGVPDLGGTSEEDECFADEVHQ---PVLTYPGAYRKVSVELKIHHLSV 1498
            L ++ H+LW+S    PDLGG  E+D     E+ +   P +  PG Y  V VEL +  ++V
Sbjct: 121  LQKHNHLLWMSSTDRPDLGGKEEDDNRIVTEIDEGGSPEINQPGCYSTVCVELSLDAIAV 180

Query: 1499 NALLKSNQVNEMEGGGLFGFDQDMNSGPYNNELCGFDETTSSAPAFRVVKQLIQRCLTDA 1558
            N +L+S  +++ E     G DQ                      +F +V+Q     L + 
Sbjct: 181  NTVLQSQHIHDAE-----GVDQ----------------------SFDIVQQ---ASLEEM 210

Query: 1559 VTSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEFRKLGATIIFA 1618
            + SG      +  +     CS                          A FR L  +++F 
Sbjct: 211  LNSGPGSISNLTTYDEGAACS--------------------------ASFRIL-KSLVFN 243

Query: 1619 NFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPV--HFWHSLL--FMDQYNY 1674
             FS+V+     F    A        + L++ E   +   +P    F H L+  +  Q N 
Sbjct: 244  WFSEVVTYKNPF----ADNQLIHFYRYLRSPEAMLY---DPALCRFIHGLMKKYFMQSNQ 296

Query: 1675 GGI-----PAR-------ADESLDDDSQVDIVS-SWNIAEYLPKEIQDHFVLVVSEFMYI 1721
            GGI     P            ++DD+   D+VS +  IA  +   I   +V ++ E   +
Sbjct: 297  GGIYLSEIPNNFYKNGELCISTVDDEEDTDLVSLAKQIA--IAGHIHAVYVHIIEETARL 354

Query: 1722 PWKHAQKLAASRASLQ----EGSSCTPSITVAAAENFESHIVQYVKGEISSYFTGKLLSI 1777
            P      +     S Q      + CTPS+            VQ+ +  I +  T +L  I
Sbjct: 355  PSGVDTPVKRRGISTQLERMAETVCTPSM------------VQFSQERIQNVLTEQLFGI 402

Query: 1778 VRDAIHHMKKMNNDQHNSPGVMQTAANIHKVDAP-LEFIKHVCAAFALDQNVQHDVLVMR 1836
             +  IH     + ++   P     A +   + +P LEF+K VC    LD N+Q  V  ++
Sbjct: 403  TQ-KIHRSVSTSVNKDGDPVFPLLAGSYLPLKSPALEFVKAVCQVLRLDVNIQSQVDKLK 461

Query: 1837 KNLLKYVRVREFAPEAEFRDPCPSFILPNVICSYCNDCRDLDLCRDMALL------AQDW 1890
            ++LLK + V  FA EA F+DPC S ++P VIC YCN CRDLDLCRD  +           
Sbjct: 462  RDLLKLIGVGSFADEANFQDPCMSLVVPEVICEYCNSCRDLDLCRDACITPARGNQPASI 521

Query: 1891 HCAMPQCGQPYDREVMENALLQIVRQRERLYHLQDLVCIRCNQVKAAHLAEQCACAGSFR 1950
             C+ P+CG  Y  EV+E  L+ ++ +R   Y LQDL C +C  +K  ++++ C CAG++ 
Sbjct: 522  RCSNPECGVNYSLEVIEQHLISMLMRRSMTYTLQDLKCTKCKMIKDKNMSKYCDCAGTYS 581

Query: 1951 CKEDASDFRSKMQIFLNIA 1969
                   F  K++I L + 
Sbjct: 582  NNIPRDQFMQKLKIALPLG 600


>gi|74221399|dbj|BAE42175.1| unnamed protein product [Mus musculus]
          Length = 410

 Score =  174 bits (441), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 115/392 (29%), Positives = 194/392 (49%), Gaps = 57/392 (14%)

Query: 1646 LQTRELFEWIELEPVHFWHSLLFMDQYNYGGIPARADESL------DDDSQV-------- 1691
            + ++E+F  + +     W  LL+MD  NYGGI  +   S+      + DSQ         
Sbjct: 20   IHSKEIFHSLTISFSRCWEFLLWMDPSNYGGIKGKVPSSIHCGQVKEQDSQAREETDEEE 79

Query: 1692 ------------------DIV-SSWNIAEYLPK--EIQDHFVLVVSEFMYIPWKHAQK-- 1728
                              D++ ++WNI ++LP+    Q +F+++VS ++   ++  ++  
Sbjct: 80   EDKEKDEEEEGMGESEVEDLLENNWNILQFLPQAASCQSYFLMIVSAYIVAVYQSMKEEL 139

Query: 1729 ---LAASRASLQEGSSCTPSITVAAAENFESHIV---QYVKGEIS-SYFTGKLLSIVRDA 1781
                  S    ++G+S     +  A  +    I     YV  E++ S+FT  +   ++  
Sbjct: 140  RHSAPGSTPVKRKGASQFSQESEGATGSLPGMITFSQDYVANELTQSFFT--ITQKIQKK 197

Query: 1782 IHHMKKMNNDQHNSPGVMQTAANIHKVDAPLEFIKHVCAAFALDQNVQHDVLVMRKNLLK 1841
            +   +         P  +   +++   +  LEFIK+VC   +LD N+ + V  + ++LL+
Sbjct: 198  VTGSRNTTEPSEMFP--ILPGSHLLLNNPALEFIKYVCKVLSLDTNITNQVNKLNRDLLR 255

Query: 1842 YVRVREFAPEAEFRDPCPSFILPNVICSYCNDCRDLDLCRDM------ALLAQDWHCAMP 1895
             V V EF+ EA+FRDPC S++LP VIC  CN CRDLDLC+D       A+L Q W C+  
Sbjct: 256  LVDVGEFSEEAQFRDPCHSYVLPEVICHSCNFCRDLDLCKDSSFSQDGAILPQ-WLCS-- 312

Query: 1896 QCGQPYDREVMENALLQIVRQRERLYHLQDLVCIRCNQVKAAHLAEQCACAGSFRCKEDA 1955
             C  PYD   +E+AL++ ++++   + LQDLVC++C  +K  H+   C+CAG F      
Sbjct: 313  NCQAPYDSSAIESALVEALQRKLMAFTLQDLVCLKCRGMKETHMPVYCSCAGDFTLTIRT 372

Query: 1956 SDFRSKMQIFLNIANRQGFQLLQECTSWILEV 1987
              F  +++IF NIA       LQE   W+L+ 
Sbjct: 373  EVFMEQIRIFQNIAKYYSMSYLQETIEWLLQT 404


>gi|294927250|ref|XP_002779099.1| dna polymerase epsilon, catalytic subunit, putative [Perkinsus
           marinus ATCC 50983]
 gi|239888080|gb|EER10894.1| dna polymerase epsilon, catalytic subunit, putative [Perkinsus
           marinus ATCC 50983]
          Length = 201

 Score =  174 bits (441), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 87/181 (48%), Positives = 121/181 (66%), Gaps = 1/181 (0%)

Query: 185 DFLDCIVDLREYDVPYHIRFAIDNDVRCGQWYDVSISSTGPL-LEKRVDLLQRAEVHVCA 243
           D +D I+ L EYD+ + +R +ID+++RCG+WY VS S  G + L  + DLL +  + + A
Sbjct: 8   DPMDSIIGLFEYDLIHTVRTSIDSNIRCGKWYKVSNSMQGMVALTVQEDLLMKPPLRILA 67

Query: 244 FDIETTKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFK 303
           +DIET+K PLKFPDA  D IMMIS M+DG GYLI+NRE V   IED EY+P+PEFEG+F+
Sbjct: 68  WDIETSKAPLKFPDAQQDEIMMISVMVDGDGYLIVNREEVHGYIEDFEYSPRPEFEGFFE 127

Query: 304 VTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDK 363
             N +NE ELL  +F  +   +P I VT+NGD+FD P++  RA  H   +  + G    +
Sbjct: 128 CINCDNEKELLVAFFDLLLRTRPHITVTFNGDFFDLPYVHDRAQIHSLNLYHQCGISRPR 187

Query: 364 N 364
           N
Sbjct: 188 N 188


>gi|397639615|gb|EJK73672.1| hypothetical protein THAOC_04692, partial [Thalassiosira oceanica]
          Length = 561

 Score =  173 bits (439), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 123/453 (27%), Positives = 216/453 (47%), Gaps = 67/453 (14%)

Query: 1524 SGPYNNELCGFDETTSSAPAFRVVKQLIQRCLTDAVTSGNVFADAILQHLYRWLCSPHSK 1583
            S P  +E+       S+A +  V++ ++   L DA  S +  AD +L  +YR + SP   
Sbjct: 31   SAPLGDEM-------SAAVSLPVLRSVVLSWLKDACQSNSRVADDLLHDVYRLVSSPDVL 83

Query: 1584 LHDPVLHRILHKVMQKVFAMLLAEFRKLGATIIFANFSKVIIDTGKFDLSAAKAYCDSLL 1643
            L+DP LHR++H +M+  F  LL E ++LG+TI+ A+F +V+I TGK DL  A+ Y + ++
Sbjct: 84   LNDPALHRVVHALMRTTFLRLLGELQRLGSTIVSADFHRVVIATGKSDLFDAREYVEFVI 143

Query: 1644 KALQTR----------ELFEWIELEPVHFWHSLLFMDQYNYGGIPARADESLDD------ 1687
              +  R          E    I L P  F+   LF+D+ N+GG+     +  DD      
Sbjct: 144  STILKRAGGGDGAAPAEGLGRISLRPNGFYSHYLFLDRNNFGGVHFEQRDVEDDEENELA 203

Query: 1688 ----DSQVD--------------IVSSWNIAEYLPKEI-QDHFVLVVSEFMYIPWKHAQK 1728
                D+ V               +V  WNI +YL  ++ QD+F  V+  F    ++  Q 
Sbjct: 204  RLFNDNAVGAEDERRGGASIVPTVVCGWNIMQYLANDVAQDYFRTVIGRFSKDVFRK-QL 262

Query: 1729 LAASRASLQEGSSCTPSITVAAAENF-------ESHIVQYVKGEISSYFTGKLLSIVRDA 1781
            +    +  ++G + +P+    A ++        +  ++ Y +  IS +F   L   V + 
Sbjct: 263  MIEQSSRTRKGLTVSPTSVRGADDDEDDADLSPQEQLLAYKRKMISKHFANYLTRAVGEL 322

Query: 1782 IHHMKKMNNDQHNSPGVMQTAANIHKVDAP-LEFIKHVCAAFALDQNVQHDVLVMRKNLL 1840
            I        D        Q   +  ++  P LEF+K++     LD + + +   +RK+L 
Sbjct: 323  IE-------DGGGPEAFPQLPGSHLRLTNPALEFVKNILVVLDLDPDTRQETTYLRKSLF 375

Query: 1841 KYVRVREFAPEAEFRDPCPSFILPNVICSYCNDCRDLDLC-------RDMALLAQDWHCA 1893
              + ++E++   ++R+P  SF+LP+V C+ C++C D+DLC              + W C+
Sbjct: 376  AQIGIQEYSAVTKWRNPAASFVLPDVHCAECHECIDVDLCATPPDDDDGGPSGGRHWSCS 435

Query: 1894 MPQCGQPYDREVMENALLQIVRQRERLYHLQDL 1926
               CG  Y  E +E  L++IV+++   Y LQD+
Sbjct: 436  --NCGARYGSERVEGRLVEIVQRKCLRYQLQDV 466


>gi|395755991|ref|XP_002833770.2| PREDICTED: DNA polymerase epsilon catalytic subunit A-like [Pongo
           abelii]
          Length = 156

 Score =  172 bits (437), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 84/122 (68%), Positives = 99/122 (81%)

Query: 865 MLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEFEVDGPYKAMILPASKEEGILIKKR 924
           MLN+ V    TNDQYQ L +P S TY T SE SI FEVDGPY AMILPASKEEG  +KKR
Sbjct: 1   MLNIMVKEGFTNDQYQELAEPSSLTYITRSENSIFFEVDGPYLAMILPASKEEGKKLKKR 60

Query: 925 YAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFLHGSTIEECYSAVAAVANRWLD 984
           YAVFN+DG+LAELKGFE+KRRGEL+LIK+FQ+ +F+ FL GST+EE Y +VA VA+ WLD
Sbjct: 61  YAVFNEDGSLAELKGFEVKRRGELQLIKIFQSSVFEAFLKGSTLEEVYGSVAKVADYWLD 120

Query: 985 LL 986
           +L
Sbjct: 121 VL 122


>gi|299473107|emb|CBN78683.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 1044

 Score =  172 bits (437), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 111/336 (33%), Positives = 160/336 (47%), Gaps = 51/336 (15%)

Query: 1693 IVSSWNIAEYLPKEIQDHFVLVVSEFMYIPWKHAQKLAASR----ASL------------ 1736
            IVS WN+AEYLP  ++  F+++VS F+  P + A++L        ASL            
Sbjct: 677  IVSHWNLAEYLPASVRQVFLILVSTFLLKPHEKARQLRLDHERMVASLSNQLTQSSQPNG 736

Query: 1737 ---------QEGSSCTPS--------ITVAAA-----ENFESHIVQYVKGEISSYFTGKL 1774
                     + G    P+        + V AA      N    +  ++K  ++   T K+
Sbjct: 737  PASPGTDRGESGGGGVPASQGGMDAALAVQAALRKEEANESQSMADFLKHLVTRTLTDKV 796

Query: 1775 LSIVRDAIHHMKKMNNDQHNS-PGVMQTAANIHKVDAPLEFIKHVCAAFALDQNVQHDVL 1833
            L  V  AI        D   S PG  +   N       LEFIK +C   +LD  V  +V 
Sbjct: 797  LETV-PAIKKYSGSGPDAFPSKPGAARELTN-----PALEFIKSLCHVLSLDPTVTDEVE 850

Query: 1834 VMRKNLLKYVRVREFAPEAEFRDPCPSFILPNVICSYCNDCRDLDLCRDMALLAQD---- 1889
             +RK  L  V VR+F+ E ++ DPC SF+LP+VICS+CN CRDLDLCRD  L+ +D    
Sbjct: 851  TLRKQALAEVGVRQFSAEGQYSDPCVSFVLPDVICSFCNLCRDLDLCRDARLMDEDEEER 910

Query: 1890 WHCAMPQCGQPYDREVMENALLQIVRQRERLYHLQDLVCIRCNQVKAAHLAEQCACAGSF 1949
            W C   QC  PY+R  +E +L++ V++R   Y LQD+ C +C  V    ++  C C+G  
Sbjct: 911  WQCI--QCNHPYERSSIELSLVEAVQRRSVRYQLQDMKCAKCGAVATRSMSLTCPCSGPL 968

Query: 1950 RCKEDASDFRSKMQIFLNIANRQGFQLLQECTSWIL 1985
              +E   DF   M++   +A    F  L E    IL
Sbjct: 969  VAEESQQDFHKTMKLLRQLAIFHSFGWLLETVENIL 1004



 Score =  145 bits (367), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 64/137 (46%), Positives = 94/137 (68%)

Query: 1541 APAFRVVKQLIQRCLTDAVTSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKV 1600
            A AFR++K L+   L +    GN  AD++L H YRW+C+  S LH+  LHR++H++M KV
Sbjct: 403  ASAFRILKVLVTTWLDEVTHMGNAHADSLLVHFYRWICARQSLLHNATLHRLVHRLMHKV 462

Query: 1601 FAMLLAEFRKLGATIIFANFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPV 1660
            F+ L+AE R+LGA ++FA+F KVII T K D+ AA+ Y   ++  + +R+LF  ++LEP 
Sbjct: 463  FSRLIAELRRLGACVVFASFQKVIIATNKSDVKAARDYAKFVVSTVTSRDLFNTLQLEPK 522

Query: 1661 HFWHSLLFMDQYNYGGI 1677
             FW  LLF+D  +YGGI
Sbjct: 523  MFWEQLLFLDDQDYGGI 539


>gi|125539615|gb|EAY86010.1| hypothetical protein OsI_07371 [Oryza sativa Indica Group]
          Length = 152

 Score =  166 bits (419), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 80/112 (71%), Positives = 96/112 (85%)

Query: 14  TKKQKLIRSAEEELEAKLGYDLFSEGDKRLGWLLTFASSSLEDEDTRKVYSCIDLYFVSQ 73
            K Q+L   AEE LE++LG+  +++ ++RLGWLLTF+ SS EDEDT K+YSC+DLYFVSQ
Sbjct: 36  AKDQRLRLGAEELLESRLGFAPYTDSERRLGWLLTFSPSSWEDEDTGKIYSCVDLYFVSQ 95

Query: 74  DGSTFKSKYKFRPYFYAATKEKMEMDVEAYLRRRYESQIADIEILEKEDLDL 125
           DGSTFK KYKF PYFYAATK+KME++VEAYLRRRYE  IADIEI+EKEDLDL
Sbjct: 96  DGSTFKVKYKFPPYFYAATKDKMELEVEAYLRRRYEGDIADIEIIEKEDLDL 147


>gi|431912093|gb|ELK14231.1| DNA polymerase epsilon catalytic subunit A [Pteropus alecto]
          Length = 365

 Score =  164 bits (414), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 95/305 (31%), Positives = 156/305 (51%), Gaps = 16/305 (5%)

Query: 1695 SSWNIAEYLPK--EIQDHFVLVVSEFMYIPWKHAQ----KLAASRASLQEGSSCTPSITV 1748
            ++WN+  +LP+    Q +F+++VS ++   +   Q    + A     ++   +  PS   
Sbjct: 57   NNWNVVRFLPQAASCQSYFLMIVSAYIVAVYHSLQEELGRSAPGSTPVRRRGASQPSQEA 116

Query: 1749 AAAENFESHIVQYVKGEISSYFTGKLLSIVRDAIHHMKKMNNDQHNSPGVMQTAANIHKV 1808
              A      ++ + +  +++  T    +I +     +    N    S        +   +
Sbjct: 117  QGAAGALPGVITFSQDYVANELTQNFFTITQKIRKKVTGSRNSAELSALFPVLPGSHLPL 176

Query: 1809 DAP-LEFIKHVCAAFALDQNVQHDVLVMRKNLLKYVRVREFAPEAEFRDPCPSFILPNVI 1867
            + P LEFIK+VC   +LD N+ + V  + ++LL+ V V EF+ EA+FRDPC S++LP VI
Sbjct: 177  NNPALEFIKYVCKVLSLDTNITNQVNKLNRDLLRLVDVGEFSEEAQFRDPCRSYVLPEVI 236

Query: 1868 CSYCNDCRDLDLCRDMALLAQD------WHCAMPQCGQPYDREVMENALLQIVRQRERLY 1921
            C  CN C+DLDLCRD + ++QD      W C+   C   YD  V+E AL++ ++++   +
Sbjct: 237  CRSCNFCQDLDLCRDPS-VSQDGAVLPQWLCS--NCQAAYDSSVIEAALVEALQKKLMAF 293

Query: 1922 HLQDLVCIRCNQVKAAHLAEQCACAGSFRCKEDASDFRSKMQIFLNIANRQGFQLLQECT 1981
             LQDL C+RC  VK  H++  C CAGSF        F  ++  F NIA   G   L E  
Sbjct: 294  TLQDLACLRCGGVKETHMSVYCTCAGSFALTIRTKVFMEQIGTFRNIAQHCGMSYLMETL 353

Query: 1982 SWILE 1986
             W+L+
Sbjct: 354  EWLLQ 358


>gi|390356723|ref|XP_792042.3| PREDICTED: DNA polymerase epsilon catalytic subunit A-like
            [Strongylocentrotus purpuratus]
          Length = 340

 Score =  163 bits (413), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 85/229 (37%), Positives = 136/229 (59%), Gaps = 10/229 (4%)

Query: 1471 DEVHQPVLTYPGAYRKVSVELKIHHLSVNALLKSNQVNEMEGG-GLFGFD-------QDM 1522
            DE     L + G Y+ V V+L + +L+VN LL+S+QV+E+EG  G   FD       +DM
Sbjct: 11   DESGGVELNHSGCYQTVCVDLDMANLAVNTLLQSHQVSELEGAAGSIAFDAIQQTSLEDM 70

Query: 1523 NSGP--YNNELCGFDETTSSAPAFRVVKQLIQRCLTDAVTSGNVFADAILQHLYRWLCSP 1580
             SG       L  +DET     AFR++K ++   L D  T  NVFAD  + H YRWLCSP
Sbjct: 71   VSGQPGAAASLASYDETALCTVAFRIMKTMVHGWLRDVTTYHNVFADYQIMHYYRWLCSP 130

Query: 1581 HSKLHDPVLHRILHKVMQKVFAMLLAEFRKLGATIIFANFSKVIIDTGKFDLSAAKAYCD 1640
             + L+DP L R L+ +M+K+F  L++EF++LGA I+ AN+++++I T K  +  A  Y D
Sbjct: 131  SALLYDPALRRTLNGLMKKLFLQLMSEFKRLGAVIVHANYNQIVICTKKTRIVDAVTYVD 190

Query: 1641 SLLKALQTRELFEWIELEPVHFWHSLLFMDQYNYGGIPARADESLDDDS 1689
             +   +++ +LF  +EL     W  ++++D  N+GG+  +  E+L+ ++
Sbjct: 191  YVTNTIKSNDLFHGVELSYKQCWQLIMWLDTANHGGVKGKIPEALEGEN 239


>gi|10437532|dbj|BAB15063.1| unnamed protein product [Homo sapiens]
          Length = 370

 Score =  159 bits (402), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 98/308 (31%), Positives = 159/308 (51%), Gaps = 22/308 (7%)

Query: 1695 SSWNIAEYLPK--EIQDHFVLVVSEFMYIPWKHAQKLAASRASLQEGSSCTPSITVAAAE 1752
            ++WNI ++LP+    Q++F+++VS ++   + H  K    R++   GS+       +   
Sbjct: 62   NNWNILQFLPQAASCQNYFLMIVSAYIVAVY-HCMKDGLRRSA--PGSTPVRRRGASQLS 118

Query: 1753 NFESHIVQYVKGEIS---SYFTGKLLSIVRDAIHHMKKMNNDQHNSPGVMQT-----AAN 1804
            +     V  + G I+    Y   +L          ++K      NS  + +       ++
Sbjct: 119  HEAEGAVGALPGMITFSQDYVANELTQSFFTITQKIQKKVTGSRNSTELSEMFPVLPGSH 178

Query: 1805 IHKVDAPLEFIKHVCAAFALDQNVQHDVLVMRKNLLKYVRVREFAPEAEFRDPCPSFILP 1864
            +   +  LEFIK+VC   +LD N+ + V  + ++LL+ V V EF+ EA+FRDPC S++LP
Sbjct: 179  LLLNNPALEFIKYVCKVLSLDTNITNQVNKLNRDLLRLVDVGEFSEEAQFRDPCRSYVLP 238

Query: 1865 NVICSYCNDCRDLDLCRDM------ALLAQDWHCAMPQCGQPYDREVMENALLQIVRQRE 1918
             VIC  CN CRDLDLC+D       A+L Q W C+   C  PYD   +E  L+++++++ 
Sbjct: 239  EVICRSCNFCRDLDLCKDSSFSEDGAVLPQ-WLCS--NCQAPYDSSAIEMTLVEVLQKKL 295

Query: 1919 RLYHLQDLVCIRCNQVKAAHLAEQCACAGSFRCKEDASDFRSKMQIFLNIANRQGFQLLQ 1978
              + LQDLVC++C  VK   +   C+CAG F        F  ++ IF NIA   G   L 
Sbjct: 296  MAFTLQDLVCLKCRGVKETSMPVYCSCAGDFALTIHTQVFMEQIGIFRNIAQHYGMSYLL 355

Query: 1979 ECTSWILE 1986
            E   W+L+
Sbjct: 356  ETLEWLLQ 363


>gi|18204295|gb|AAH21559.1| POLE protein [Homo sapiens]
          Length = 370

 Score =  159 bits (402), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 98/308 (31%), Positives = 158/308 (51%), Gaps = 22/308 (7%)

Query: 1695 SSWNIAEYLPK--EIQDHFVLVVSEFMYIPWKHAQKLAASRASLQEGSSCTPSITVAAAE 1752
            ++WNI ++LP+    Q++F+++VS ++   + H  K    R++   GS+       +   
Sbjct: 62   NNWNILQFLPQAASCQNYFLMIVSAYIVAVY-HCMKDGLRRSA--PGSTPVRRRGASQLS 118

Query: 1753 NFESHIVQYVKGEIS---SYFTGKLLSIVRDAIHHMKKMNNDQHNSPGVMQT-----AAN 1804
                  V  + G I+    Y   +L          ++K      NS  + +       ++
Sbjct: 119  QEAEGAVGALPGMITFSQDYVANELTQSFFTITQKIQKKVTGSRNSTELSEMFPVLPGSH 178

Query: 1805 IHKVDAPLEFIKHVCAAFALDQNVQHDVLVMRKNLLKYVRVREFAPEAEFRDPCPSFILP 1864
            +   +  LEFIK+VC   +LD N+ + V  + ++LL+ V V EF+ EA+FRDPC S++LP
Sbjct: 179  LLLNNPALEFIKYVCKVLSLDTNITNQVNKLNRDLLRLVDVGEFSEEAQFRDPCRSYVLP 238

Query: 1865 NVICSYCNDCRDLDLCRDM------ALLAQDWHCAMPQCGQPYDREVMENALLQIVRQRE 1918
             VIC  CN CRDLDLC+D       A+L Q W C+   C  PYD   +E  L+++++++ 
Sbjct: 239  EVICRSCNFCRDLDLCKDSSFSEDGAVLPQ-WLCS--NCQAPYDSSAIEMTLVEVLQKKL 295

Query: 1919 RLYHLQDLVCIRCNQVKAAHLAEQCACAGSFRCKEDASDFRSKMQIFLNIANRQGFQLLQ 1978
              + LQDLVC++C  VK   +   C+CAG F        F  ++ IF NIA   G   L 
Sbjct: 296  MAFTLQDLVCLKCRGVKETSMPVYCSCAGDFALTIHTQVFMEQIGIFRNIAQHYGMSYLL 355

Query: 1979 ECTSWILE 1986
            E   W+L+
Sbjct: 356  ETLEWLLQ 363


>gi|238583871|ref|XP_002390381.1| hypothetical protein MPER_10345 [Moniliophthora perniciosa FA553]
 gi|215453723|gb|EEB91311.1| hypothetical protein MPER_10345 [Moniliophthora perniciosa FA553]
          Length = 658

 Score =  159 bits (401), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 92/271 (33%), Positives = 150/271 (55%), Gaps = 11/271 (4%)

Query: 1457 PDLGGTSEEDECFADEVHQPVLTYPGAYRKVSVELKIHHLSVNALLKSNQVNEMEG-GGL 1515
            PDLGG  E D+   DE+        G Y  V +EL + +L+VN+++ S  VNE+EG GG 
Sbjct: 341  PDLGGI-ENDKRPTDELPNTEFFVAGVYPNVCLELTVRNLAVNSVIHSVVVNELEGSGGT 399

Query: 1516 FGFDQ------DMNSGPYNNELCGFDETTSSAPAFRVVKQLIQRCLTDAVTSGNVFADAI 1569
              FD       +   G  + +L    E+  S+  F ++K +++  L D ++S       +
Sbjct: 400  TVFDSVSKTLDEYAEGTGSRDLT-LGESNVSSHTFSILKNMVRGWLLDRISSNETSPATL 458

Query: 1570 -LQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEFRKLGATIIFANFSKVIIDTG 1628
             + H +RW+ S  S ++D  +HR +H +M+K F  LLAEF++LG+ +++A+FS++++ T 
Sbjct: 459  SIDHFWRWISSSTSNMYDSSIHRFVHGLMRKTFVQLLAEFKRLGSHVVYADFSRILLGTS 518

Query: 1629 KFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLFMDQYNYGGIPARADESLDDD 1688
            K     A AY   +  A+ + ELF+ I L    F+  L+FMDQ N GGI      +L+  
Sbjct: 519  K-PPGTAHAYATYINTAVTSHELFQHIYLRTERFYDYLVFMDQANMGGIVCEDPLALEPS 577

Query: 1689 SQVDIVSSWNIAEYLPKEIQDHFVLVVSEFM 1719
            +++ I   WNIAE+LP  +Q  F  +V  F+
Sbjct: 578  NELSIEMRWNIAEFLPGAVQKQFQAMVQYFI 608



 Score = 48.5 bits (114), Expect = 0.038,   Method: Compositional matrix adjust.
 Identities = 24/84 (28%), Positives = 45/84 (53%), Gaps = 5/84 (5%)

Query: 1335 FLAWVVVEGIMVRIPITVPRLFYLNSKDPIVEKFPG-----RRVNKTLPHGRRSFNLIEV 1389
            ++ W+ V+G +V +P+ +PR FY++ + P    F G      RV + LP      NL ++
Sbjct: 10   YMLWLSVDGELVPVPLRIPREFYVHMRTPNETIFRGGSYSFERVTRNLPRDLPCVNLYKI 69

Query: 1390 MIDEDQFRKESKKLAALLADPEVE 1413
             + ED +++  +    L +DP V+
Sbjct: 70   TVREDTYQEIREHFIDLASDPNVD 93


>gi|12805591|gb|AAH02275.1| Pole protein [Mus musculus]
          Length = 320

 Score =  154 bits (389), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 77/182 (42%), Positives = 111/182 (60%), Gaps = 9/182 (4%)

Query: 1812 LEFIKHVCAAFALDQNVQHDVLVMRKNLLKYVRVREFAPEAEFRDPCPSFILPNVICSYC 1871
            LEFIK+VC   +LD N+ + V  + ++LL+ V V EF+ EA+FRDPC S++LP VIC  C
Sbjct: 136  LEFIKYVCKVLSLDTNITNQVNKLNRDLLRLVDVGEFSEEAQFRDPCHSYVLPEVICHSC 195

Query: 1872 NDCRDLDLCRDM------ALLAQDWHCAMPQCGQPYDREVMENALLQIVRQRERLYHLQD 1925
            N CRDLDLC+D       A+L Q W C+   C  PYD   +E+AL++ ++++   + LQD
Sbjct: 196  NFCRDLDLCKDSSFSQDGAILPQ-WLCS--NCQAPYDSSAIESALVEALQRKLMAFTLQD 252

Query: 1926 LVCIRCNQVKAAHLAEQCACAGSFRCKEDASDFRSKMQIFLNIANRQGFQLLQECTSWIL 1985
            LVC++C  +K  H+   C+CAG F        F  +++IF NIA       LQE   W+L
Sbjct: 253  LVCLKCRGMKETHMPVYCSCAGDFTLTIRTEVFMEQIRIFQNIAKYYSMSYLQETIEWLL 312

Query: 1986 EV 1987
            + 
Sbjct: 313  QT 314


>gi|397616990|gb|EJK64232.1| hypothetical protein THAOC_15055, partial [Thalassiosira oceanica]
          Length = 709

 Score =  147 bits (371), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 109/360 (30%), Positives = 167/360 (46%), Gaps = 39/360 (10%)

Query: 1075 MKFYLRKWCKTSS----DVGIRSIVDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVH 1130
            MK YLRKW K+      D  IR+++DW YY +RL++ I+KIITIPAA+QKV NPVPRV H
Sbjct: 1    MKHYLRKWLKSPGMEDDDFDIRNVLDWDYYIERLNNTIRKIITIPAALQKVPNPVPRVPH 60

Query: 1131 PDWLYKKVREKEDKFRQRKLVDIFSSLKKDDFLNKTCNAETNLMDENVEDLEDFPKKRRN 1190
            PDWL   VR   DK +Q+ +  +F        + K    +  +   ++ D+EDF  +   
Sbjct: 61   PDWLQTTVRRMNDKRKQKSIKSMFG-------VKKPVLGDAEVSSPSLVDMEDFGGRSAA 113

Query: 1191 SVNGPRPIVRCFEVNNEQKTVKTTDQVDSLRQQLEPSEVSDQQPSSQNAIDTENIDRIV- 1249
            +    RP+V        +   + +  V S     E    +    +   A+  E   R+  
Sbjct: 114  AAGPGRPVVHS---RRRRALPRLSPDVASATDSAEAGTAASPALAGGAAVTPEKEVRVRL 170

Query: 1250 ---DYKGWLELKKRKWKDNLDRRKKQKLGSLRASHQANGVSESLGDMINHKEAQRRTGVG 1306
                   WL  KK  W      RK++K    RA   A     + GD  + K+ + ++G+G
Sbjct: 171  SNETVPEWLTQKKALW------RKQRK--DRRAKRAAESSQIAKGDSSDPKKQKTKSGLG 222

Query: 1307 S---YFRRQETAMTRCHWQIIQLV-----PSSQSGVFLAWVVV-EGIMVRIPITVPRLFY 1357
            S   Y R    A+    W ++++       +S  G    W +V  G + RI I +PR+ Y
Sbjct: 223  SMEGYVRNAAEALKTSEWHVLEVRDLSSDGTSSDGTLQVWAMVGNGSLQRIRIKLPRIVY 282

Query: 1358 LNSKDPIVEKFPG----RRVNKTLPHGRRSFNLIEVMIDEDQFRKESKKLAALLADPEVE 1413
            ++S+  + +   G    +RV + LPH R    L EV + E  F+          +DP VE
Sbjct: 283  VDSRVELKQGLVGQLLVKRVERHLPHNRSCGMLYEVSMPERLFQTGDWIGQLKPSDPSVE 342


>gi|385301904|gb|EIF46062.1| dna polymerase epsilon catalytic subunit a [Dekkera bruxellensis
           AWRI1499]
          Length = 306

 Score =  140 bits (354), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 72/232 (31%), Positives = 119/232 (51%), Gaps = 24/232 (10%)

Query: 25  EELEAKLGYDLFSEGDKRLGWLLTFASSSLEDEDTRKVYSCIDLYFVSQDGSTFKSKYKF 84
           +  ++ +G+D F  G KR GWL+ F ++ + ++   + Y+ +D YF+ ++G  FK    +
Sbjct: 63  DRFDSVVGFDRFESGPKRTGWLVNFHTTFVPNDKILQGYAAVDYYFLDEEGGYFKVTMXY 122

Query: 85  RPYFYAATKEKMEMDVEAYLRRRYESQIADIEILEKEDLDLKNHLSGLHKSYLKISFDTV 144
            PYF    +E  E +VE YLR+  ES + ++E + KEDL   NHL G+ +  LK+SF  +
Sbjct: 123 DPYFLVKCREGTETEVEEYLRKFLESTVKNVEQITKEDLRQPNHLLGIRRKLLKLSFHNI 182

Query: 145 QQLMDVKKDLLHVVERNQAKFDAAEAYESIL------------------------TGKRE 180
             L++ +  L  +V+ N    ++ + Y S+                          G   
Sbjct: 183 NDLLEARSMLQPIVKXNHENKESNDIYRSVNLNYNNLLKXDSXSTNSFSSSEISANGGXP 242

Query: 181 QRPQDFLDCIVDLREYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLLEKRVD 232
              +D  + I +LREYDVPYH R +ID D+R G+W+DV +      L +R D
Sbjct: 243 SHHEDPSELIEELREYDVPYHARVSIDKDIRVGKWFDVEVDRGNVTLTERKD 294


>gi|387593988|gb|EIJ89012.1| DNA polymerase II [Nematocida parisii ERTm3]
          Length = 863

 Score =  137 bits (345), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 72/186 (38%), Positives = 115/186 (61%), Gaps = 4/186 (2%)

Query: 958  LFDKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLADYGE 1017
            +F+  L G+T+EECY  +A  A+ W+D+++ + + +A  E+ +Y  E+  MSKS      
Sbjct: 1    MFNLLLSGNTLEECYMTLAECADYWIDIIETKAQALAQDEIFNYFGETRNMSKSADALSM 60

Query: 1018 QKSCAVTTARRLSDFLGDTMVKDKGLRCQYIVACEPQGTPVSERAVPVAIFETDAEIMKF 1077
             K+  +T A RLS+ LG  +V  KG+ C +I++  P+  PV+ RA+P ++F  +    + 
Sbjct: 61   VKTTCLTAAERLSELLGQNVVV-KGMSCSFIISKYPENEPVTSRAIPQSVFYAEKGQKEK 119

Query: 1078 YLRKWCKTSSDVG-IRSIVDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDWL-- 1134
            YL+KW +  +    IR I+DWSYY +RLS+ I +II IPA++Q + NPV RV  P W   
Sbjct: 120  YLQKWLRMKTVPNDIREIIDWSYYLERLSNIIARIIIIPASLQGLKNPVGRVNPPQWAVH 179

Query: 1135 YKKVRE 1140
            +KK+ E
Sbjct: 180  HKKITE 185


>gi|326431652|gb|EGD77222.1| hypothetical protein PTSG_08314 [Salpingoeca sp. ATCC 50818]
          Length = 124

 Score =  137 bits (344), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 69/121 (57%), Positives = 94/121 (77%)

Query: 909  MILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFLHGSTI 968
            MILPASKE+   +KKRYAVF+DDG L ELKGFEIKR GELKLIK+FQ+ +F+ FL G  +
Sbjct: 1    MILPASKEKDKKLKKRYAVFDDDGNLCELKGFEIKRNGELKLIKIFQSSVFEAFLQGDNL 60

Query: 969  EECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLADYGEQKSCAVTTARR 1028
            EE Y AVA VA+ WLD+L ++G+ ++  EL D ISE+ +MS++L +Y  QKS +++TA+ 
Sbjct: 61   EEVYEAVATVADHWLDILYSKGEGLSSQELFDLISENRSMSRTLKEYEGQKSTSISTAKS 120

Query: 1029 L 1029
            +
Sbjct: 121  V 121


>gi|169418|gb|AAA02565.1| DNA polymerase II, partial [Pneumocystis carinii]
          Length = 102

 Score =  135 bits (340), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 62/102 (60%), Positives = 79/102 (77%)

Query: 241 VCAFDIETTKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEG 300
           V AFDIETTKLPLKFPD+  D IMMISYM+DGQG+LI NR+ V  DI++ EYTPKPE+EG
Sbjct: 1   VMAFDIETTKLPLKFPDSAIDQIMMISYMIDGQGFLITNRDIVLLDIDNFEYTPKPEYEG 60

Query: 301 YFKVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFL 342
            F + N  +E  L++ +F H+++ KP I  TYNGD+FD PF+
Sbjct: 61  PFWIFNEPDEKSLIQRFFNHIRDAKPTIISTYNGDFFDLPFI 102


>gi|147791987|emb|CAN64256.1| hypothetical protein VITISV_040148 [Vitis vinifera]
          Length = 2099

 Score =  134 bits (337), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 71/105 (67%), Positives = 78/105 (74%), Gaps = 3/105 (2%)

Query: 538  EQLLNNLDRDLQYAIKVEGKMDLESVSNYDEVKNAIMEKLLRLQEEPIREECPLIYHLDV 597
            +QL+ NLDRDLQYAI+VEGKMD+ESVSNYDEVKNAI EKL++LQ EPIREE PLIYHLDV
Sbjct: 1936 KQLIVNLDRDLQYAIRVEGKMDVESVSNYDEVKNAIKEKLMKLQGEPIREEFPLIYHLDV 1995

Query: 598  AAMYPNIILTNRLQPPSIVTDEVCTACDFNRPGKTCLRKLEWVWR 642
            AAMYPNIILTNRLQ    V      A      G     K + VWR
Sbjct: 1996 AAMYPNIILTNRLQ---WVLPATVKATLLGWDGSFVGEKRKGVWR 2037


>gi|294929744|ref|XP_002779354.1| dna polymerase epsilon, catalytic subunit, putative [Perkinsus
           marinus ATCC 50983]
 gi|239888419|gb|EER11149.1| dna polymerase epsilon, catalytic subunit, putative [Perkinsus
           marinus ATCC 50983]
          Length = 196

 Score =  132 bits (332), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 68/185 (36%), Positives = 106/185 (57%), Gaps = 11/185 (5%)

Query: 530 FKLDPSAYEQLLNNLDRDLQYAIKVEGKMDLESVSNYDEVKNAIMEKLLRLQEEPIREEC 589
           F+LD +A ++L+ + D+  ++ ++ E K  ++ + N++EV   + E L  L+  P R E 
Sbjct: 1   FRLDTNAIDELIESADKTCRFFVETEEKTTVDEIENFEEVVGELTEALKELRRNPHRSEE 60

Query: 590 PLIYHLDVAAMYPNIILTNRLQPPSIVTDEVCTACDFNRP--GKTCLRKLEWVWRGEIFM 647
           PLIYHLDVAAMYPNIIL+NRLQP +IV  + C  C ++ P     C R LEW WRG+++M
Sbjct: 61  PLIYHLDVAAMYPNIILSNRLQPSAIVNPDYCNQCSYSDPQLKSDCKRHLEWKWRGDLYM 120

Query: 648 GKRSDYYHLKKQIESEF---------VDGTNGHLSKSFLDLPKMEQQSRLKDRLKKYCQK 698
             R+D  H + ++              DGT+      + +L + E+   L   ++ +  K
Sbjct: 121 ATRADVQHQQSELSGPRHKYTTTVTEADGTSTVRKVGWDELTERERMEILIKNVRNFSLK 180

Query: 699 AYKRV 703
           AYKRV
Sbjct: 181 AYKRV 185


>gi|238566483|ref|XP_002386074.1| hypothetical protein MPER_15846 [Moniliophthora perniciosa FA553]
 gi|215436914|gb|EEB87004.1| hypothetical protein MPER_15846 [Moniliophthora perniciosa FA553]
          Length = 113

 Score =  123 bits (309), Expect = 9e-25,   Method: Composition-based stats.
 Identities = 59/115 (51%), Positives = 79/115 (68%), Gaps = 3/115 (2%)

Query: 265 MISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNVNNEIELLRLWFAHMQEV 324
           MISYM+DGQGYLI NRE V EDIED EYTPK  +EG F + N  +E   ++ +F+H+QEV
Sbjct: 1   MISYMVDGQGYLITNREIVSEDIEDFEYTPKEGYEGPFIIFNEPDEAATIKRFFSHIQEV 60

Query: 325 KPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCD-KNQGECRAKFACHLDC 378
           KP +  T+NGD+FD+PFL+ RA  +   M  E GF  D +++ +CR     H+DC
Sbjct: 61  KPAVMATFNGDFFDFPFLDARAKANDINMFFETGFAKDVEDEYKCRT--CVHMDC 113


>gi|195331289|ref|XP_002032335.1| GM26500 [Drosophila sechellia]
 gi|194121278|gb|EDW43321.1| GM26500 [Drosophila sechellia]
          Length = 289

 Score =  122 bits (306), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 66/172 (38%), Positives = 99/172 (57%), Gaps = 6/172 (3%)

Query: 1812 LEFIKHVCAAFALDQNVQHDVLVMRKNLLKYVRVREFAPEAEFRDPCPSFILPNVICSYC 1871
            LE I+ +  A ++D+ +   +  +R+N+L+ V + EF+  AE+ DPC S I+  VIC  C
Sbjct: 110  LELIRTLIKALSVDKTLAEQINELRRNMLRLVGIGEFSDLAEWEDPCDSHIINEVICKAC 169

Query: 1872 NDCRDLDLCRDMALLAQD----WHCAMPQCGQPYDREVMENALLQIVRQRERLYHLQDLV 1927
            N CRDLDLC+D     +D    W CA  QC   YD E +E  +L  ++++   Y LQDL 
Sbjct: 170  NHCRDLDLCKDKHRAMKDGVPVWLCA--QCYVAYDNEEIEMRMLDALQRKMMSYVLQDLR 227

Query: 1928 CIRCNQVKAAHLAEQCACAGSFRCKEDASDFRSKMQIFLNIANRQGFQLLQE 1979
            C RC+++K  +LAE C CAG+F       D ++ +  F  +A     QLLQ+
Sbjct: 228  CSRCSEIKHENLAEFCTCAGNFVPLISGKDIQTLLGTFSKVAANHKMQLLQQ 279


>gi|300121939|emb|CBK22513.2| unnamed protein product [Blastocystis hominis]
          Length = 202

 Score =  118 bits (295), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 64/183 (34%), Positives = 106/183 (57%), Gaps = 8/183 (4%)

Query: 1803 ANIHKVDAP-LEFIKHVCAAFALDQNVQHDVLVMRKNLLKYVRVREFAPEAEFRDPCPSF 1861
             +++++  P LE +K +C   +LD+ V+ + +++R+ LL+ ++V+EFA EA+F DP  SF
Sbjct: 14   TSLYRLTTPILELVKLLCKVISLDKTVEQEAVIIRRQLLRNLKVKEFAGEAQFSDPFHSF 73

Query: 1862 ILPNVICSYCNDCRDLDLCRDMALL----AQDWHCAMPQCGQPYDREVMENALLQIVRQR 1917
            ++P V+C YCN   +LD+C D  L      + W C   +C  PYD   +E AL+++  Q 
Sbjct: 74   VIPAVVCPYCNFTVNLDICSDPELQESAKIRPWRCR--ECDSPYDMMSIEMALIEMCGQM 131

Query: 1918 ERLYHLQDLVCIRCNQVKAAHLAEQCACAGSFRCKE-DASDFRSKMQIFLNIANRQGFQL 1976
               Y  QDL C +C Q++ ++L   C+C+G++  KE  A   R  M+I    A   G + 
Sbjct: 132  VYGYATQDLSCKKCQQIQRSNLDMYCSCSGNWGNKEMQAEKVRELMKIVKEKAEFHGMKW 191

Query: 1977 LQE 1979
            L E
Sbjct: 192  LSE 194


>gi|74139068|dbj|BAE38433.1| unnamed protein product [Mus musculus]
          Length = 193

 Score =  117 bits (294), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 55/152 (36%), Positives = 99/152 (65%), Gaps = 1/152 (0%)

Query: 25  EELEAKLGYDLFSEGDKRLGWLLTFASSSLEDEDTRKVYSCIDLYFVSQDGSTFKSKYKF 84
           ++++ + G++   E  +R GWL+    + + DED R V S +D YF+  DGS FK    +
Sbjct: 42  DKMDLRFGFERLKEPGERTGWLINMHPTEILDEDKRLV-SAVDYYFIQDDGSRFKVALPY 100

Query: 85  RPYFYAATKEKMEMDVEAYLRRRYESQIADIEILEKEDLDLKNHLSGLHKSYLKISFDTV 144
            PYFY A ++  + +V ++L ++++ +IA +E + KEDLDL NHL  L +SY+K+SF TV
Sbjct: 101 MPYFYIAARKGCDREVSSFLSKKFQGKIAKLENVPKEDLDLPNHLVDLKRSYIKLSFHTV 160

Query: 145 QQLMDVKKDLLHVVERNQAKFDAAEAYESILT 176
           + L+ V+K++   V++N+ +  A++ Y ++L+
Sbjct: 161 EDLVKVRKEISPAVKKNREQDHASDEYTTMLS 192


>gi|261402213|ref|YP_003246437.1| DNA-directed DNA polymerase [Methanocaldococcus vulcanius M7]
 gi|261369206|gb|ACX71955.1| DNA-directed DNA polymerase [Methanocaldococcus vulcanius M7]
          Length = 1657

 Score =  109 bits (273), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 104/417 (24%), Positives = 186/417 (44%), Gaps = 52/417 (12%)

Query: 141 FDTVQQLMDVKKDLLHVVER----NQAKFDAAEAYESILTGKREQRPQ----DFLDCIVD 192
            D +++ + +K+DLL  VE     N+      +    I+    ++ P+       D + +
Sbjct: 57  IDKIKEFL-LKEDLLKFVENLEVVNKTILKKEKEIVKIIATHPQRVPKLRKIKECDIVKE 115

Query: 193 LREYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLLEKRVDL-LQRAEVHVCAFDIETTKL 251
           + E+D+P+  R+ ID+D+    ++D          E R  + ++  ++   +FD+E    
Sbjct: 116 IYEHDIPFAKRYLIDSDIVPMTYWD---------FENRKQVSIEIPKLKTVSFDMEVYNR 166

Query: 252 PLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNVNNEI 311
             + PD + D I+M S+  D  G +I  +     +IE                  VN+E 
Sbjct: 167 DTE-PDPEKDPILMASFWDDNGGKVITYKHFDHSNIE-----------------VVNSEK 208

Query: 312 ELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKM-----SEELGFQCDKNQG 366
           +L++     +++    +  TYNGD FD+P+L+ RA  +G  +      EEL  +    + 
Sbjct: 209 DLIKKIVEMLRQY--DVIFTYNGDNFDFPYLKARAKIYGIDIKLGRDGEELKIKRGGMEF 266

Query: 367 ECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQMM 426
                   H+D +   +R   L      L+ V     G + L++    +V +     +++
Sbjct: 267 RSYIPGRVHIDLYPISRR--LLKLTKYTLEDVVYNLFGIEKLKIPHTKIVDYWANNDKIL 324

Query: 427 ASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVI 486
             YS+ DA  T+ +   Y  P     + I+  +P E+ R  SG + E LLM  A+K N+I
Sbjct: 325 IEYSLQDAKYTHKI-GKYFFPLEVMFSRIVNQTPFEITRMSSGQMVEYLLMKNAFKENMI 383

Query: 487 CPNKHQSDPEKFYRNHLLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQLLNN 543
            PNK     EK YR  LL S  Y GG+V+  E G+F   +   F+  P   + ++ N
Sbjct: 384 VPNKPD---EKEYRKRLLTS--YEGGYVKEPEKGMFEDIISMDFRCHPRGTKVIVKN 435


>gi|256811403|ref|YP_003128772.1| DNA-directed DNA polymerase [Methanocaldococcus fervens AG86]
 gi|256794603|gb|ACV25272.1| DNA-directed DNA polymerase [Methanocaldococcus fervens AG86]
          Length = 1647

 Score =  109 bits (272), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 119/458 (25%), Positives = 198/458 (43%), Gaps = 74/458 (16%)

Query: 84  FRPYFYAATKEKMEMDVEAYLRRRYESQIADIEILEKEDLDLKNHLSGLHKSYLKISFDT 143
           F+PYFY                  Y+ ++ D +I   +D  LKN L              
Sbjct: 37  FKPYFYVEL---------------YDDKVKDEDIETIKDFLLKNGL-----------LRF 70

Query: 144 VQQLMDVKKDLLHVVERNQAKFDAAEAYESILTGKREQRPQDFLDCIVDLREYDVPYHIR 203
           V+ +  VKK +L   E+   K  A    +     K ++ P      + ++ E+D+P+  R
Sbjct: 71  VENIEVVKKIILRK-EKELIKIIATHPQKIPKLRKIKECP-----IVKEIYEHDIPFAKR 124

Query: 204 FAIDNDVRCGQWYDVSISSTGPLLEKRVDLLQRAEVHVCAFDIETTKLPLKFPDADYDII 263
           + IDN++    ++D    +  P+       ++  ++ V AFD+E      + PD + D I
Sbjct: 125 YLIDNEIIPMTYWD--FENRKPVS------IEIPKLKVVAFDMEVYNRDTE-PDPERDPI 175

Query: 264 MMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNVNNEIELLRLWFAHMQE 323
           +M S+  +  G +I  ++    +IE +E                 NE  L++     +++
Sbjct: 176 LMASFWDENGGRVITYKKFNHPNIEVVE-----------------NEKILIKRIIETLRQ 218

Query: 324 VKPGIYVTYNGDYFDWPFLETRAAHHGFKM-----SEELGFQCDKNQGECRAKFACHLDC 378
               I  TYNGD FD+P+L+ RA  +G  +      EEL  +    +         H+D 
Sbjct: 219 Y--DIIYTYNGDNFDFPYLKARAKFYGIDVELGREGEELKIKRGGMEYRSYIPGRVHIDL 276

Query: 379 FAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQMMASYSVSDAVATY 438
           +   +R   L      L+ VT    G + L++    +V +     + +  YS+ DA  TY
Sbjct: 277 YPISRR--LLKLTKYTLEDVTYNLFGVEKLKIPHTKIVEYWANNDETLIEYSLQDAKYTY 334

Query: 439 YLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVICPNKHQSDPEKF 498
            +   Y  P     + I+  +P E  R  SG + E LLM +A+K N+I PNK     E+ 
Sbjct: 335 RI-GNYFFPLEVMFSRIVNQTPFETTRMSSGQMVEYLLMKKAFKENMIVPNKPD---EEE 390

Query: 499 YRNHLLESETYIGGHVECLESGVFRSDLPTSFK-LDPS 535
           YR  LL   TY GG+V+  E G+F   +   F+ L PS
Sbjct: 391 YRRRLL--TTYEGGYVKEPEKGMFEDIINMDFRSLYPS 426


>gi|195069837|ref|XP_001997042.1| GH12980 [Drosophila grimshawi]
 gi|193892739|gb|EDV91605.1| GH12980 [Drosophila grimshawi]
          Length = 256

 Score =  107 bits (267), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 57/149 (38%), Positives = 87/149 (58%), Gaps = 6/149 (4%)

Query: 1835 MRKNLLKYVRVREFAPEAEFRDPCPSFILPNVICSYCNDCRDLDLCRDMALLAQD----W 1890
            +R++  +   V EF+  A++ DPC + I+  VIC  CN CRDLDLC+D     +D    W
Sbjct: 100  LRQSQARSEDVGEFSDLADWTDPCDTHIINEVICKACNHCRDLDLCKDKQRALKDGIPVW 159

Query: 1891 HCAMPQCGQPYDREVMENALLQIVRQRERLYHLQDLVCIRCNQVKAAHLAEQCACAGSFR 1950
             CA  QC   YD E +E  ++ +++++   Y LQDL C+RCN++K  +LAE C CAG+F 
Sbjct: 160  LCA--QCYVAYDNEEIEMRMIDVLQRKVMSYVLQDLRCVRCNEIKRENLAEFCTCAGNFV 217

Query: 1951 CKEDASDFRSKMQIFLNIANRQGFQLLQE 1979
                  +  + +  F N+A+    QLLQ+
Sbjct: 218  PLISGKEIETLLNTFNNVASYHKMQLLQQ 246



 Score = 70.1 bits (170), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 29/88 (32%), Positives = 61/88 (69%)

Query: 1600 VFAMLLAEFRKLGATIIFANFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEP 1659
            +F  ++AEF++LGATI++A+F+++I+ + K  +S A  Y D ++++L+ +E+F  ++L  
Sbjct: 1    MFLRIIAEFKRLGATIVYADFNRIILSSVKKSVSDALGYVDYVVQSLRNKEMFHSMQLSF 60

Query: 1660 VHFWHSLLFMDQYNYGGIPARADESLDD 1687
               W+ +L++DQ N+ GI  +  + +D+
Sbjct: 61   EQCWNFMLWLDQSNFFGIRGKLPKGIDE 88


>gi|15669075|ref|NP_247880.1| DNA polymerase B1 [Methanocaldococcus jannaschii DSM 2661]
 gi|3915679|sp|Q58295.2|DPOL_METJA RecName: Full=DNA polymerase; Contains: RecName: Full=Mja pol-1
           intein; Contains: RecName: Full=Mja pol-2 intein
 gi|2826345|gb|AAB98889.1| DNA polymerase B1 [Methanocaldococcus jannaschii DSM 2661]
          Length = 1634

 Score =  107 bits (267), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 93/354 (26%), Positives = 159/354 (44%), Gaps = 41/354 (11%)

Query: 188 DCIVDLREYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLLEKRVDLLQRAEVHVCAFDIE 247
           + + ++ E+D+P+  R+ IDN++    ++D           K+   ++  ++   AFD+E
Sbjct: 113 EIVKEIYEHDIPFAKRYLIDNEIIPMTYWDFE--------NKKPVSIEIPKLKSVAFDME 164

Query: 248 TTKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNV 307
                 + P+ + D I+M S+  +  G +I  +E    +IE                  V
Sbjct: 165 VYNRDTE-PNPERDPILMASFWDENGGKVITYKEFNHPNIE-----------------VV 206

Query: 308 NNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGF-----KMSEELGFQCD 362
            NE EL++     ++E    +  TYNGD FD+P+L+ RA  +G      K  EEL  +  
Sbjct: 207 KNEKELIKKIIETLKEY--DVIYTYNGDNFDFPYLKARAKIYGIDINLGKDGEELKIKRG 264

Query: 363 KNQGECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEK 422
             +         H+D +   +R   L      L+ V     G + L++    +V +    
Sbjct: 265 GMEYRSYIPGRVHIDLYPISRR--LLKLTKYTLEDVVYNLFGIEKLKIPHTKIVDYWANN 322

Query: 423 PQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYK 482
            + +  YS+ DA  TY +   Y  P     + I+  +P E+ R  SG + E LLM +A+K
Sbjct: 323 DKTLIEYSLQDAKYTYKI-GKYFFPLEVMFSRIVNQTPFEITRMSSGQMVEYLLMKRAFK 381

Query: 483 ANVICPNKHQSDPEKFYRNHLLESETYIGGHVECLESGVFRSDLPTSFKLDPSA 536
            N+I PNK   D E++ R  L    TY GG+V+  E G+F   +   F+  P  
Sbjct: 382 ENMIVPNK--PDEEEYRRRVL---TTYEGGYVKEPEKGMFEDIISMDFRCHPKG 430



 Score = 52.8 bits (125), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 66/263 (25%), Positives = 103/263 (39%), Gaps = 54/263 (20%)

Query: 783  NSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIG-KPLELDTDGIWCVLPGS 841
            NS YGY+    AR+YS E A +VTY G K I       EK G K L +DTDG + +    
Sbjct: 1358 NSVYGYLAFPRARFYSRECAEIVTYLGRKYILETVKEAEKFGFKVLYIDTDGFYAIWKEK 1417

Query: 842  FP-ENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEF 900
               E    K  +  + +    P  M                                 E 
Sbjct: 1418 ISKEELIKKAMEFVEYINSKLPGTM---------------------------------EL 1444

Query: 901  EVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFD 960
            E +G +K  I         + KKRYA+ +++G +  +KG E  RR    + K+ Q  + +
Sbjct: 1445 EFEGYFKRGIF--------VTKKRYALIDENGRVT-VKGLEFVRRDWSNIAKITQRRVLE 1495

Query: 961  KFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDY--ISESSTMSKSLADYGEQ 1018
              L   +IE+    +  V        D + K I   +LI Y  +++     K+ A + E 
Sbjct: 1496 ALLVEGSIEKAKKIIQDVIK------DLREKKIKKEDLIIYTQLTKDPKEYKTTAPHVEI 1549

Query: 1019 KSCAVTTARRL--SDFLGDTMVK 1039
                +   +R+   D +G  +VK
Sbjct: 1550 AKKLMREGKRIKVGDIIGYIIVK 1572


>gi|18976584|ref|NP_577941.1| DNA-directed DNA polymerase [Pyrococcus furiosus DSM 3638]
 gi|397650711|ref|YP_006491292.1| DNA-directed DNA polymerase [Pyrococcus furiosus COM1]
 gi|48428875|sp|P61875.1|DPOL_PYRFU RecName: Full=DNA polymerase; AltName: Full=Pfu polymerase
 gi|48428876|sp|P61876.1|DPOL_PYRWO RecName: Full=DNA polymerase; AltName: Full=Pwo polymerase
 gi|216918|dbj|BAA02362.1| DNA polymerase [Pyrococcus furiosus]
 gi|2347063|gb|AAB67984.1| DNA-dependent DNA polymerase [Pyrococcus woesei]
 gi|18892147|gb|AAL80336.1| DNA-directed DNA polymerase [Pyrococcus furiosus DSM 3638]
 gi|393188302|gb|AFN03000.1| DNA-directed DNA polymerase [Pyrococcus furiosus COM1]
          Length = 775

 Score =  107 bits (266), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 107/387 (27%), Positives = 175/387 (45%), Gaps = 66/387 (17%)

Query: 189 CIVDLREYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLLEKRVDLLQRAEVHVCAFDIET 248
            +VD+ EYD+P+  R+ ID  +                    + +    E+ + AFDIET
Sbjct: 105 AVVDIFEYDIPFAKRYLIDKGL--------------------IPMEGEEELKILAFDIET 144

Query: 249 TKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNVN 308
             L  +  +     I+MISY  + +  +I  +        DL Y           V  V+
Sbjct: 145 --LYHEGEEFGKGPIIMISYADENEAKVITWKNI------DLPY-----------VEVVS 185

Query: 309 NEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMS-----EELGFQCDK 363
           +E E+++ +   ++E  P I VTYNGD FD+P+L  RA   G K++      E   Q   
Sbjct: 186 SEREMIKRFLRIIREKDPDIIVTYNGDSFDFPYLAKRAEKLGIKLTIGRDGSEPKMQRIG 245

Query: 364 NQGECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRF--AKE 421
           +      K   H D +  + R   LP  +  L+AV +A  G    +V  +++ +   + E
Sbjct: 246 DMTAVEVKGRIHFDLYHVITRTINLP--TYTLEAVYEAIFGKPKEKVYADEIAKAWESGE 303

Query: 422 KPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAY 481
             + +A YS+ DA ATY L   ++ P    L+ ++     +V R  +G L E  L+ +AY
Sbjct: 304 NLERVAKYSMEDAKATYELGKEFL-PMEIQLSRLVGQPLWDVSRSSTGNLVEWFLLRKAY 362

Query: 482 KANVICPNKHQSDPEKFYRNHLLESETYIGGHVECLESGVFRSDLPTSFK-LDPSAYEQL 540
           + N + PNK     E+ Y+  L ES  Y GG V+  E G++ + +   F+ L PS    +
Sbjct: 363 ERNEVAPNKPS---EEEYQRRLRES--YTGGFVKEPEKGLWENIVYLDFRALYPSII--I 415

Query: 541 LNNLDRDLQYAIKVEGKMDLESVSNYD 567
            +N+  D          ++LE   NYD
Sbjct: 416 THNVSPDT---------LNLEGCKNYD 433



 Score = 72.8 bits (177), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 67/226 (29%), Positives = 95/226 (42%), Gaps = 46/226 (20%)

Query: 760 KIQEAQDMV--VLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNA- 816
           K++E QD +  +L D  Q A K + NSFYGY     ARWY  E A  VT  G K I+   
Sbjct: 467 KMKETQDPIEKILLDYRQKAIKLLANSFYGYYGYAKARWYCKECAESVTAWGRKYIELVW 526

Query: 817 RLLIEKIG-KPLELDTDGIWCVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNT 875
           + L EK G K L +DTDG++  +PG   E    K  +  K +    P ++          
Sbjct: 527 KELEEKFGFKVLYIDTDGLYATIPGGESEEIKKKALEFVKYINSKLPGLL---------- 576

Query: 876 NDQYQTLVDPVSKTYETHSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLA 935
                                  E E +G YK            + KKRYAV +++G + 
Sbjct: 577 -----------------------ELEYEGFYKRGFF--------VTKKRYAVIDEEGKVI 605

Query: 936 ELKGFEIKRRGELKLIKVFQAELFDKFLHGSTIEECYSAVAAVANR 981
             +G EI RR   ++ K  QA + +  L    +EE    V  V  +
Sbjct: 606 -TRGLEIVRRDWSEIAKETQARVLETILKHGDVEEAVRIVKEVIQK 650


>gi|195069350|ref|XP_001996962.1| GH19664 [Drosophila grimshawi]
 gi|193891980|gb|EDV90846.1| GH19664 [Drosophila grimshawi]
          Length = 277

 Score =  106 bits (264), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 57/150 (38%), Positives = 86/150 (57%), Gaps = 6/150 (4%)

Query: 1834 VMRKNLLKYVRVREFAPEAEFRDPCPSFILPNVICSYCNDCRDLDLCRDMALLAQD---- 1889
             +R++  +   V EF+  A++ DPC + I+  VIC  CN CRDLDLC+D  L  +D    
Sbjct: 120  TLRQSQARSEDVGEFSDLADWTDPCDTHIINEVICKACNHCRDLDLCKDKQLALKDGIPV 179

Query: 1890 WHCAMPQCGQPYDREVMENALLQIVRQRERLYHLQDLVCIRCNQVKAAHLAEQCACAGSF 1949
            W CA  QC   YD E +E  ++ +++ +   Y LQDL C+RCN++K  +LAE C  AG+F
Sbjct: 180  WLCA--QCYVAYDNEEIEMRMIDVLQHKVMSYVLQDLRCVRCNEIKRENLAEFCTYAGNF 237

Query: 1950 RCKEDASDFRSKMQIFLNIANRQGFQLLQE 1979
                   +  + +  F N+A+    QLLQ+
Sbjct: 238  VPLISGKEIETLLNTFNNVASYHKMQLLQQ 267



 Score = 54.3 bits (129), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 22/74 (29%), Positives = 47/74 (63%)

Query: 1613 ATIIFANFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLFMDQY 1672
            ATI++ +F+++I+ +GK  +S    Y D  +++L+ +E+F  ++L     W+ +L++DQ 
Sbjct: 35   ATIVYVDFNRIILSSGKKSVSDVLGYVDYTVQSLRNKEMFHSMQLSFEQCWNFMLWLDQS 94

Query: 1673 NYGGIPARADESLD 1686
            N+ GI  +  + +D
Sbjct: 95   NFFGIRGKLPKGID 108


>gi|185177517|pdb|2JGU|A Chain A, Crystal Structure Of Dna-directed Dna Polymerase
          Length = 775

 Score =  106 bits (264), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 106/387 (27%), Positives = 175/387 (45%), Gaps = 66/387 (17%)

Query: 189 CIVDLREYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLLEKRVDLLQRAEVHVCAFDIET 248
            +VD+ EYD+P+  R+ ID  +                    + +    E+ + AFDIET
Sbjct: 105 AVVDIFEYDIPFAKRYLIDKGL--------------------IPMEGEEELKILAFDIET 144

Query: 249 TKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNVN 308
             L  +  +     I+MISY  + +  +I  +        DL Y           V +V+
Sbjct: 145 --LYHEGEEFGKGPIIMISYADENEARVITWKNI------DLPY-----------VESVS 185

Query: 309 NEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMS-----EELGFQCDK 363
            E E+++ +   ++E  P I VTYNGD FD+P+L  RA   G K++      E   Q   
Sbjct: 186 TEKEMIKRFLRIIREKDPDIIVTYNGDSFDFPYLAKRAEKLGIKLTIGRDGSEPKMQRIG 245

Query: 364 NQGECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRF--AKE 421
           +      K   H D +  ++    LP  +  L+AV +A  G    +V  +++ +   + E
Sbjct: 246 DMTAVEVKGRIHFDLYHVIRTTINLP--TYTLEAVYEAIFGKPKEKVYADEIAKAWESGE 303

Query: 422 KPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAY 481
             + +A YS+ DA ATY L   ++ P    L+ ++     +V R  +G L E  L+ +AY
Sbjct: 304 NLERVAKYSMEDAKATYELGKEFL-PMEIQLSRLVGQPLWDVSRSSTGNLVEWFLLRKAY 362

Query: 482 KANVICPNKHQSDPEKFYRNHLLESETYIGGHVECLESGVFRSDLPTSFK-LDPSAYEQL 540
           + N + PNK     E+ Y+  L ES  Y GG V+  E G++ + +   +K L PS    +
Sbjct: 363 ERNEVAPNKPS---EEEYQRRLRES--YTGGFVKEPEKGLWENIVYLDYKSLYPSII--I 415

Query: 541 LNNLDRDLQYAIKVEGKMDLESVSNYD 567
            +N+  D          ++LE   NYD
Sbjct: 416 THNVSPDT---------LNLEGCKNYD 433



 Score = 72.8 bits (177), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 67/226 (29%), Positives = 95/226 (42%), Gaps = 46/226 (20%)

Query: 760 KIQEAQDMV--VLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNA- 816
           K++E QD +  +L D  Q A K + NSFYGY     ARWY  E A  VT  G K I+   
Sbjct: 467 KMKETQDPIEKILLDYRQKAIKLLANSFYGYYGYAKARWYCKECAESVTAWGRKYIELVW 526

Query: 817 RLLIEKIG-KPLELDTDGIWCVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNT 875
           + L EK G K L +DTDG++  +PG   E    K  +  K +    P ++          
Sbjct: 527 KELEEKFGFKVLYIDTDGLYATIPGGESEEIKKKALEFVKYINSKLPGLL---------- 576

Query: 876 NDQYQTLVDPVSKTYETHSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLA 935
                                  E E +G YK            + KKRYAV +++G + 
Sbjct: 577 -----------------------ELEYEGFYKRGFF--------VTKKRYAVIDEEGKVI 605

Query: 936 ELKGFEIKRRGELKLIKVFQAELFDKFLHGSTIEECYSAVAAVANR 981
             +G EI RR   ++ K  QA + +  L    +EE    V  V  +
Sbjct: 606 -TRGLEIVRRDWSEIAKETQARVLETILKHGDVEEAVRIVKEVIQK 650


>gi|315231385|ref|YP_004071821.1| DNA polymerase I [Thermococcus barophilus MP]
 gi|315184413|gb|ADT84598.1| archaeal DNA polymerase I [Thermococcus barophilus MP]
          Length = 1138

 Score =  105 bits (263), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 106/390 (27%), Positives = 178/390 (45%), Gaps = 69/390 (17%)

Query: 190 IVDLREYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLLEKRVDLLQRAEVHVCAFDIET- 248
           ++D+ EYD+P+  R+ ID  +                    + +    E+ + AFDIET 
Sbjct: 106 VIDIFEYDIPFAKRYLIDKGL--------------------IPMEGDEELKLLAFDIETF 145

Query: 249 TKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNVN 308
                +F + +   I+MISY  + +  +I  ++       DL Y           V  V+
Sbjct: 146 YHEGEQFGEGE---IIMISYADENEAKVITWKKI------DLPY-----------VEVVS 185

Query: 309 NEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKM-------SEELGFQC 361
           +E E+++ +   ++E  P + +TYNGD FD P+L  RA   G ++       + E   Q 
Sbjct: 186 SEREMIKRFVQIIREKDPDVLITYNGDNFDLPYLIKRAQKLGLRLFISRDKENPEPKIQR 245

Query: 362 DKNQGECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRF--A 419
             ++     K   H D F  V+R   LP  +  L+AV +A LG    ++   ++     +
Sbjct: 246 MGDRFAVEIKGRIHFDLFPVVRRTINLP--TYTLEAVYEAVLGKKKTKLEAAEITAIWES 303

Query: 420 KEKPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQ 479
           +E  + +A YS+ DA ATY L   +  P    LA +I  S  +V R  +G L E  L+  
Sbjct: 304 EEGMKELAKYSMEDAKATYELGREFF-PMEAELARLIGQSVWDVSRSSTGNLVEWFLLRI 362

Query: 480 AYKANVICPNKHQSDPEKFYRNHLLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQ 539
           AY+ N + PNK  SD E  Y+  L    TY+GG+V+  E G++ + +   F+  P+    
Sbjct: 363 AYQRNELAPNK-PSDEE--YQRRL--RTTYLGGYVKEPERGLWENIVYLDFRCHPA---- 413

Query: 540 LLNNLDRDLQYAIKVEGKMDLESVSNYDEV 569
                  D +  +K +G +++  V   D V
Sbjct: 414 -------DTKVVVKGKGIVNISEVREGDYV 436



 Score = 61.6 bits (148), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 68/263 (25%), Positives = 109/263 (41%), Gaps = 57/263 (21%)

Query: 770  LYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQ-NARLLIEKIG-KPL 827
            + D  Q A K + NS YGY+    ARWYS E A  VT  G   I+   + + EK G K L
Sbjct: 843  MLDYRQKAVKLLANSHYGYMGYPKARWYSKECAESVTAWGRTYIEMTIKEIEEKFGFKVL 902

Query: 828  ELDTDGIWCVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVS 887
              DTDG++  +P +  E    K K+  K +    P ++                      
Sbjct: 903  YADTDGLYATIPDADAETIKKKAKEFLKYINSKLPGLL---------------------- 940

Query: 888  KTYETHSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGE 947
                       E E +G Y             + KKRYAV +++G +   +G E+ RR  
Sbjct: 941  -----------ELEYEGFYLRGFF--------VTKKRYAVIDEEGKIT-TRGLEVVRRDW 980

Query: 948  LKLIKVFQAELFDKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSEL-IDYISESS 1006
             ++ K  QA++ +  L   ++E+    V  V            +D+A  ++ ++ +    
Sbjct: 981  SEIAKETQAKVLEAILKDGSVEKAVEIVKKVV-----------EDLAKYKVPLEKLVIHE 1029

Query: 1007 TMSKSLADYGEQKSCAVTTARRL 1029
             ++KSL +Y +     V  ARRL
Sbjct: 1030 QITKSLDEY-KATGPHVAVARRL 1051


>gi|242398902|ref|YP_002994326.1| DNA polymerase [Thermococcus sibiricus MM 739]
 gi|242265295|gb|ACS89977.1| DNA polymerase [Thermococcus sibiricus MM 739]
          Length = 1469

 Score =  104 bits (260), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 105/360 (29%), Positives = 164/360 (45%), Gaps = 63/360 (17%)

Query: 189 CIVDLREYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLLEKRVDLLQRAEVHVCAFDIET 248
            + D+ EYD+P+  R+ IDN +                    + +    E+ + AFDIET
Sbjct: 105 AVQDIYEYDIPFAKRYLIDNGL--------------------IPMEGDEELKMLAFDIET 144

Query: 249 TKLPLKFPDAD---YDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVT 305
                 + + D      I+MISY  D +G  +I  + +     DL Y           V 
Sbjct: 145 F-----YHEGDEFGKGEIIMISYA-DEEGARVITWKNI-----DLPY-----------VD 182

Query: 306 NVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKM-------SEELG 358
            V+NE E+++ +   ++E  P + +TYNGD FD P+L  RA   G ++       +    
Sbjct: 183 VVSNEREMIKRFIQIIKEKDPDVIITYNGDNFDLPYLIKRAEKLGLRLILSRDNENPVPK 242

Query: 359 FQCDKNQGECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRF 418
            Q   N      K   H D F  VKR   LP  +  L+AV +  LG    ++  E++   
Sbjct: 243 IQRMGNSFAVEIKGRIHFDLFPVVKRAVNLP--TYTLEAVYETVLGKHKSKLGAEEIAAI 300

Query: 419 --AKEKPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLL 476
              +E  + +A YS+ DA ATY L   +  P    LA +I  S  +V R  +G L E  +
Sbjct: 301 WETEEGLKKLAQYSMEDAKATYELGREF-FPMEVELAKLIGQSVWDVSRSSTGNLVEWYM 359

Query: 477 MVQAYKANVICPNKHQSDPEKFYRNHLLESETYIGGHVECLESGVFRSDLPTSFK-LDPS 535
           +  AY+ N + PN+  SD E  Y+  L    TY+GG+V+  E G++ + +   F+ L PS
Sbjct: 360 LRVAYERNELAPNR-PSDEE--YKRRL--RTTYLGGYVKEPERGLWENIIYLDFRSLYPS 414


>gi|375082407|ref|ZP_09729467.1| DNA polymerase family B [Thermococcus litoralis DSM 5473]
 gi|232020|sp|P30317.1|DPOL_THELI RecName: Full=DNA polymerase; AltName: Full=Vent DNA polymerase;
           Contains: RecName: Full=Endonuclease PI-TliII; AltName:
           Full=IVPS2; AltName: Full=Tli pol-1 intein; Contains:
           RecName: Full=Endonuclease PI-TliI; AltName: Full=IVPS1;
           AltName: Full=Tli pol-2 intein
 gi|154686|gb|AAA72100.1| DNA-dependent DNA polymerase precursor [Thermococcus litoralis]
 gi|374742900|gb|EHR79278.1| DNA polymerase family B [Thermococcus litoralis DSM 5473]
          Length = 1702

 Score =  103 bits (258), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 106/374 (28%), Positives = 166/374 (44%), Gaps = 68/374 (18%)

Query: 175 LTGKREQRPQDFLDCIVDLREYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLLEKRVDLL 234
           + GK  + P      +VD+ EYD+P+  R+ ID  +                    + + 
Sbjct: 96  MRGKIREHP-----AVVDIYEYDIPFAKRYLIDKGL--------------------IPME 130

Query: 235 QRAEVHVCAFDIETTKLPLKFPDAD---YDIIMMISYMLDGQGYLIINRECVGEDIEDLE 291
              E+ + AFDIET      + + D      I+MISY  + +  +I  +        DL 
Sbjct: 131 GDEELKLLAFDIETF-----YHEGDEFGKGEIIMISYADEEEARVITWKNI------DLP 179

Query: 292 YTPKPEFEGYFKVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGF 351
           Y           V  V+NE E+++ +   ++E  P + +TYNGD FD P+L  RA   G 
Sbjct: 180 Y-----------VDVVSNEREMIKRFVQVVKEKDPDVIITYNGDNFDLPYLIKRAEKLGV 228

Query: 352 KM-------SEELGFQCDKNQGECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLG 404
           ++         E   Q   +      K   H D F  V+R   LP  +  L+AV +A LG
Sbjct: 229 RLVLGRDKEHPEPKIQRMGDSFAVEIKGRIHFDLFPVVRRTINLP--TYTLEAVYEAVLG 286

Query: 405 YDPLEVNPEDMVRF--AKEKPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDE 462
               ++  E++      +E  + +A YS+ DA ATY L   +  P    LA +I  S  +
Sbjct: 287 KTKSKLGAEEIAAIWETEESMKKLAQYSMEDARATYELGKEF-FPMEAELAKLIGQSVWD 345

Query: 463 VLRKGSGTLCEMLLMVQAYKANVICPNKHQSDPEKFYRNHLLESETYIGGHVECLESGVF 522
           V R  +G L E  L+  AY  N + PNK   D E++ R       TY+GG+V+  E G++
Sbjct: 346 VSRSSTGNLVEWYLLRVAYARNELAPNK--PDEEEYKRRL---RTTYLGGYVKEPEKGLW 400

Query: 523 RSDLPTSFK-LDPS 535
            + +   F+ L PS
Sbjct: 401 ENIIYLDFRSLYPS 414


>gi|3913524|sp|O33845.1|DPOL_THEAG RecName: Full=DNA polymerase; AltName: Full=Pol Tfu; Contains:
           RecName: Full=Tag pol-1 intein; AltName: Full=Intein I;
           AltName: Full=Tsp-TY pol-1; Contains: RecName: Full=Tag
           pol-2 intein; AltName: Full=Intein II; AltName:
           Full=Tsp-TY pol-2; Contains: RecName: Full=Tag pol-3
           intein; AltName: Full=Intein III; AltName: Full=Tsp-TY
           pol-3
 gi|2293389|emb|CAA73475.1| DNA-directed DNA polymerase [Thermococcus sp.]
          Length = 1829

 Score =  103 bits (258), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 107/377 (28%), Positives = 166/377 (44%), Gaps = 75/377 (19%)

Query: 175 LTGKREQRPQDFLDCIVDLREYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLLEKRVDLL 234
           L GK  + P      ++D+ EYD+P+  R+ ID  +                    + + 
Sbjct: 96  LRGKIREHP-----AVIDIYEYDIPFAKRYLIDKGL--------------------IPME 130

Query: 235 QRAEVHVCAFDIETTKLPLKFPDAD---YDIIMMISYMLDGQGYLIINRECVGEDIEDLE 291
              E+ + AFDIET      + + D      I+MISY  + +  +I  +        DL 
Sbjct: 131 GDEELKLMAFDIETF-----YHEGDEFGKGEIIMISYADEEEARVITWKNI------DLP 179

Query: 292 YTPKPEFEGYFKVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGF 351
           Y           V  V+NE E+++ +   ++E  P + +TYNGD FD P+L  RA     
Sbjct: 180 Y-----------VDVVSNEREMIKRFVQIVREKDPDVLITYNGDNFDLPYLIKRAE---- 224

Query: 352 KMSEELGFQCDKNQGECR-----------AKFACHLDCFAWVKRDSYLPQGSQGLKAVTK 400
           K+   L    DK   E +            K   H D F  V+R   LP  +  L+AV +
Sbjct: 225 KLGVTLLLGRDKEHPEPKIHRMGDSFAVEIKGRIHFDLFPVVRRTINLP--TYTLEAVYE 282

Query: 401 AKLGYDPLEVNPEDMVRF--AKEKPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPM 458
           A LG    ++  E++      +E  + +A YS+ DA ATY L   +  P    LA +I  
Sbjct: 283 AVLGKTKSKLGAEEIAAIWETEESMKKLAQYSMEDARATYELGKEFF-PMEAELAKLIGQ 341

Query: 459 SPDEVLRKGSGTLCEMLLMVQAYKANVICPNKHQSDPEKFYRNHLLESETYIGGHVECLE 518
           S  +V R  +G L E  L+  AY+ N + PNK     E+ YR  L    TY+GG+V+  E
Sbjct: 342 SVWDVSRSSTGNLVEWYLLRVAYERNELAPNKPD---EEEYRRRL--RTTYLGGYVKEPE 396

Query: 519 SGVFRSDLPTSFKLDPS 535
            G++ +     F+  P+
Sbjct: 397 RGLWENIAYLDFRCHPA 413


>gi|301030555|gb|ADK47977.1| type B polymerase [Thermococcus litoralis]
          Length = 774

 Score =  103 bits (257), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 102/360 (28%), Positives = 163/360 (45%), Gaps = 63/360 (17%)

Query: 189 CIVDLREYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLLEKRVDLLQRAEVHVCAFDIET 248
            ++D+ EYD+P+  R+ ID  +                    + +    E+ + AFDIET
Sbjct: 105 AVIDIYEYDIPFAKRYLIDKGL--------------------IPMEGDEELKLLAFDIET 144

Query: 249 TKLPLKFPDAD---YDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVT 305
                 + + D      I+MISY  + +  +I  +        DL Y           V 
Sbjct: 145 F-----YHEGDEFGKGEIIMISYADEEEARVITWKNI------DLPY-----------VD 182

Query: 306 NVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKM-------SEELG 358
            V+NE E+++ +   ++E  P + +TYNGD FD P+L  RA   G ++       + E  
Sbjct: 183 VVSNEREMIKRFVQVVKEKDPDVIITYNGDNFDLPYLIKRAEKLGVRLVLGRDKENPEPK 242

Query: 359 FQCDKNQGECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRF 418
            Q   +      K   H D F  V+R   LP  +  L+AV +A LG    ++  E++   
Sbjct: 243 IQRMGDSFAVEIKGRIHFDLFPVVRRTINLP--TYTLEAVYEAVLGKTKSKLGAEEIAAI 300

Query: 419 --AKEKPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLL 476
              +E  + +A YS+ DA ATY L   +  P    LA +I  S  +V R  +G L E  L
Sbjct: 301 WETEESMKKLAQYSMEDARATYELGKEF-FPMEAELAKLIGQSVWDVSRSSTGNLVEWYL 359

Query: 477 MVQAYKANVICPNKHQSDPEKFYRNHLLESETYIGGHVECLESGVFRSDLPTSFK-LDPS 535
           +  AY+ N + PNK   D E++ R       TY+GG+V+  E G++ + +   F+ L PS
Sbjct: 360 LRVAYERNELAPNK--PDEEEYKRRL---RTTYLGGYVKEPEKGLWENIIYLDFRSLYPS 414



 Score = 59.7 bits (143), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 56/214 (26%), Positives = 87/214 (40%), Gaps = 44/214 (20%)

Query: 770 LYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQ-NARLLIEKIG-KPL 827
           + D  Q A K + NS+YGY+    ARWYS E A  VT  G   I+   + + EK G K L
Sbjct: 481 MLDYRQRAVKLLANSYYGYMGYPKARWYSKECAESVTAWGRHYIEMTIKEIEEKFGFKVL 540

Query: 828 ELDTDGIWCVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVS 887
             DTDG +  + G  PE    K ++    +    P ++                      
Sbjct: 541 YADTDGFYATISGEKPEIIKKKAREFLNYINSKLPGLL---------------------- 578

Query: 888 KTYETHSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGE 947
                      E E +G Y             + KKRYAV +++G +   +G E+ RR  
Sbjct: 579 -----------ELEYEGFYLRGFF--------VTKKRYAVIDEEGRIT-TRGLEVVRRDW 618

Query: 948 LKLIKVFQAELFDKFLHGSTIEECYSAVAAVANR 981
            ++ K  QA++ +  L   ++E+    V  V  +
Sbjct: 619 SEIAKETQAKVLEAILKDGSVEKAVEIVRDVLEK 652


>gi|348689|gb|AAA72101.1| DNA dependent DNA polymerase [Thermococcus litoralis]
          Length = 774

 Score =  103 bits (257), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 106/374 (28%), Positives = 166/374 (44%), Gaps = 68/374 (18%)

Query: 175 LTGKREQRPQDFLDCIVDLREYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLLEKRVDLL 234
           + GK  + P      +VD+ EYD+P+  R+ ID  +                    + + 
Sbjct: 96  MRGKIREHP-----AVVDIYEYDIPFAKRYLIDKGL--------------------IPME 130

Query: 235 QRAEVHVCAFDIETTKLPLKFPDAD---YDIIMMISYMLDGQGYLIINRECVGEDIEDLE 291
              E+ + AFDIET      + + D      I+MISY  + +  +I  +        DL 
Sbjct: 131 GDEELKLLAFDIETF-----YHEGDEFGKGEIIMISYADEEEARVITWKNI------DLP 179

Query: 292 YTPKPEFEGYFKVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGF 351
           Y           V  V+NE E+++ +   ++E  P + +TYNGD FD P+L  RA   G 
Sbjct: 180 Y-----------VDVVSNEREMIKRFVQVVKEKDPDVIITYNGDNFDLPYLIKRAEKLGV 228

Query: 352 KM-------SEELGFQCDKNQGECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLG 404
           ++         E   Q   +      K   H D F  V+R   LP  +  L+AV +A LG
Sbjct: 229 RLVLGRDKEHPEPKIQRMGDSFAVEIKGRIHFDLFPVVRRTINLP--TYTLEAVYEAVLG 286

Query: 405 YDPLEVNPEDMVRF--AKEKPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDE 462
               ++  E++      +E  + +A YS+ DA ATY L   +  P    LA +I  S  +
Sbjct: 287 KTKSKLGAEEIAAIWETEESMKKLAQYSMEDARATYELGKEF-FPMEAELAKLIGQSVWD 345

Query: 463 VLRKGSGTLCEMLLMVQAYKANVICPNKHQSDPEKFYRNHLLESETYIGGHVECLESGVF 522
           V R  +G L E  L+  AY  N + PNK   D E++ R       TY+GG+V+  E G++
Sbjct: 346 VSRSSTGNLVEWYLLRVAYARNELAPNK--PDEEEYKRRL---RTTYLGGYVKEPEKGLW 400

Query: 523 RSDLPTSFK-LDPS 535
            + +   F+ L PS
Sbjct: 401 ENIIYLDFRSLYPS 414



 Score = 65.9 bits (159), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 59/214 (27%), Positives = 88/214 (41%), Gaps = 44/214 (20%)

Query: 770 LYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQ-NARLLIEKIG-KPL 827
           + D  Q A K + NS+YGY+    ARWYS E A  VT  G   I+   R + EK G K L
Sbjct: 481 MLDYRQRAIKLLANSYYGYMGYPKARWYSKECAESVTAWGRHYIEMTIREIEEKFGFKVL 540

Query: 828 ELDTDGIWCVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVS 887
             DTDG +  +PG  PE    K K+    +    P ++                      
Sbjct: 541 YADTDGFYATIPGEKPELIKKKAKEFLNYINSKLPGLL---------------------- 578

Query: 888 KTYETHSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGE 947
                      E E +G Y             + KKRYAV +++G +   +G E+ RR  
Sbjct: 579 -----------ELEYEGFYLRGFF--------VTKKRYAVIDEEGRIT-TRGLEVVRRDW 618

Query: 948 LKLIKVFQAELFDKFLHGSTIEECYSAVAAVANR 981
            ++ K  QA++ +  L   ++E+    V  V  +
Sbjct: 619 SEIAKETQAKVLEAILKEGSVEKAVEVVRDVVEK 652


>gi|86753389|gb|ABD14868.1| PolA precursor [Thermococcus zilligii]
          Length = 1467

 Score =  103 bits (256), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 99/355 (27%), Positives = 165/355 (46%), Gaps = 56/355 (15%)

Query: 189 CIVDLREYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLLEKRVDLLQRAEVHVCAFDIET 248
            +VD+ EYD+P+  R+ ID  +                    + +    E+ + AFDIET
Sbjct: 105 AVVDIYEYDIPFAKRYLIDRGL--------------------IPMEGDEELRMLAFDIET 144

Query: 249 TKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNVN 308
             L  +  +     I+MISY  D +G  +I  + +     DL Y           V +V+
Sbjct: 145 --LYHEGEEFGEGPILMISYA-DEEGARVITWKNI-----DLPY-----------VESVS 185

Query: 309 NEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKM-----SEELGFQCDK 363
            E E+++ +   +QE  P + +TYNGD FD+ +L+ R+   G K        E   Q   
Sbjct: 186 TEKEMIKRFLKVIQEKDPDVLITYNGDNFDFAYLKKRSETLGVKFILGRDGSEPKIQRMG 245

Query: 364 NQGECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRF--AKE 421
           ++     K   H D +  ++R   LP  +  L+ V +A  G    +V  E++ R   + E
Sbjct: 246 DRFAVEVKGRIHFDLYPVIRRTINLP--TYTLETVYEAIFGQPKEKVYAEEIARAWESGE 303

Query: 422 KPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAY 481
             + +A YS+ DA ATY L   +  P    L+ ++  S  +V R  +G L E  L+ +AY
Sbjct: 304 GLERVARYSMEDAKATYELGKEF-FPMEAQLSRLVGQSLWDVSRSSTGNLVEWFLLRKAY 362

Query: 482 KANVICPNKHQSDPEKFYRNHLLESETYIGGHVECLESGVFRSDLPTSFK-LDPS 535
           + N + PNK    P++  R     +E+Y GG+V+  E G++ + +   +K L PS
Sbjct: 363 ERNELAPNK----PDE--RELARRAESYAGGYVKEPEKGLWENIVYLDYKSLYPS 411


>gi|409095984|ref|ZP_11216008.1| DNA polymerase, family B [Thermococcus zilligii AN1]
          Length = 1467

 Score =  102 bits (255), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 99/355 (27%), Positives = 165/355 (46%), Gaps = 56/355 (15%)

Query: 189 CIVDLREYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLLEKRVDLLQRAEVHVCAFDIET 248
            +VD+ EYD+P+  R+ ID  +                    + +    E+ + AFDIET
Sbjct: 105 AVVDIYEYDIPFAKRYLIDRGL--------------------IPMEGDEELRMLAFDIET 144

Query: 249 TKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNVN 308
             L  +  +     I+MISY  D +G  +I  + +     DL Y           V +V+
Sbjct: 145 --LYHEGEEFGEGPILMISYA-DEEGARVITWKNI-----DLPY-----------VESVS 185

Query: 309 NEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKM-----SEELGFQCDK 363
            E E+++ +   +QE  P + +TYNGD FD+ +L+ R+   G K        E   Q   
Sbjct: 186 TEKEMIKRFLKVIQEKDPDVLITYNGDNFDFAYLKKRSEMLGVKFILGRDGSEPKIQRMG 245

Query: 364 NQGECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRF--AKE 421
           ++     K   H D +  ++R   LP  +  L+ V +A  G    +V  E++ R   + E
Sbjct: 246 DRFAVEVKGRIHFDLYPVIRRTINLP--TYTLETVYEAVFGQPKEKVYAEEIARAWESGE 303

Query: 422 KPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAY 481
             + +A YS+ DA ATY L   +  P    L+ ++  S  +V R  +G L E  L+ +AY
Sbjct: 304 GLERVARYSMEDAKATYELGKEF-FPMEAQLSRLVGQSLWDVSRSSTGNLVEWFLLRKAY 362

Query: 482 KANVICPNKHQSDPEKFYRNHLLESETYIGGHVECLESGVFRSDLPTSFK-LDPS 535
           + N + PNK    P++  R     +E+Y GG+V+  E G++ + +   +K L PS
Sbjct: 363 ERNELAPNK----PDE--RELARRTESYAGGYVKEPERGLWENIVYLDYKSLYPS 411


>gi|378813034|gb|AFC60629.1| family B DNA polymerase precursor [Thermococcus waiotapuensis]
          Length = 1467

 Score =  101 bits (252), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 98/355 (27%), Positives = 165/355 (46%), Gaps = 56/355 (15%)

Query: 189 CIVDLREYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLLEKRVDLLQRAEVHVCAFDIET 248
            +VD+ EYD+P+  R+ ID  +                    + +    E+ + AFDIET
Sbjct: 105 AVVDIYEYDIPFAKRYLIDKGL--------------------IPMEGNEELRMLAFDIET 144

Query: 249 TKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNVN 308
             L  +  +     I+MISY  D +G  +I  + +     DL Y           V +V+
Sbjct: 145 --LYHEGEEFGEGPILMISYA-DEEGARVITWKNI-----DLPY-----------VESVS 185

Query: 309 NEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKM-----SEELGFQCDK 363
            E E+++ +   +QE  P + +TYNGD FD+ +L+ R+   G K        E   Q   
Sbjct: 186 TEKEMIKRFLKVIQEKDPDVLITYNGDNFDFAYLKKRSETLGVKFILGRDGSEPKIQRMG 245

Query: 364 NQGECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRF--AKE 421
           ++     K   H D +  ++R   LP  +  L+ V +A  G    +V  E++ +   + E
Sbjct: 246 DRFAVEVKGRIHFDLYPVIRRTINLP--TYTLETVYEAIFGQPKEKVYAEEIAQAWESGE 303

Query: 422 KPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAY 481
             + +A YS+ DA ATY L   +  P    L+ ++  S  +V R  +G L E  L+ +AY
Sbjct: 304 GLERVARYSMEDAKATYELGKEF-FPMEAQLSRLVGQSLWDVSRSSTGNLVEWFLLRKAY 362

Query: 482 KANVICPNKHQSDPEKFYRNHLLESETYIGGHVECLESGVFRSDLPTSFK-LDPS 535
           + N + PNK    P++  R     +E+Y GG+V+  E G++ + +   +K L PS
Sbjct: 363 ERNELAPNK----PDE--RELARRAESYAGGYVKEPEKGLWENIVYLDYKSLYPS 411


>gi|74507171|sp|Q7SIG7.1|DPOL_DESST RecName: Full=DNA polymerase; AltName: Full=D Tok Pol
 gi|6435708|pdb|1QQC|A Chain A, Crystal Structure Of An Archaebacterial Dna Polymerase
           D.Tok
          Length = 773

 Score =  101 bits (252), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 97/355 (27%), Positives = 161/355 (45%), Gaps = 56/355 (15%)

Query: 189 CIVDLREYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLLEKRVDLLQRAEVHVCAFDIET 248
            +VD+ EYD+P+  R+ ID  +                    + +    E+ + AFDIET
Sbjct: 105 AVVDIYEYDIPFAKRYLIDRGL--------------------IPMEGDEELRMLAFDIET 144

Query: 249 TKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNVN 308
             L  +  +     I+MISY  D +G  +I  + +     DL Y           V +V+
Sbjct: 145 --LYHEGEEFGEGPILMISYA-DEEGARVITWKNI-----DLPY-----------VESVS 185

Query: 309 NEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKM-----SEELGFQCDK 363
            E E+++ +   +QE  P + +TYNGD FD+ +L+ R+   G K        E   Q   
Sbjct: 186 TEKEMIKRFLKVIQEKDPDVLITYNGDNFDFAYLKKRSEMLGVKFILGRDGSEPKIQRMG 245

Query: 364 NQGECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRF--AKE 421
           ++     K   H D +  ++R   LP  +  L+ V +   G    +V  E++ R   + E
Sbjct: 246 DRFAVEVKGRIHFDLYPVIRRTINLP--TYTLETVYEPVFGQPKEKVYAEEIARAWESGE 303

Query: 422 KPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAY 481
             + +A YS+ DA ATY L   +  P    L+ ++  S  +V R  +G L E  L+ +AY
Sbjct: 304 GLERVARYSMEDAKATYELGKEFF-PMEAQLSRLVGQSLWDVSRSSTGNLVEWFLLRKAY 362

Query: 482 KANVICPNKHQSDPEKFYRNHLLESETYIGGHVECLESGVFRSDLPTSFK-LDPS 535
           + N + PNK         R     +E+Y GG+V+  E G++ + +   +K L PS
Sbjct: 363 ERNDVAPNKPDE------RELARRTESYAGGYVKEPEKGLWENIVYLDYKSLYPS 411



 Score = 45.8 bits (107), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 76/302 (25%), Positives = 116/302 (38%), Gaps = 60/302 (19%)

Query: 770  LYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNA-RLLIEKIG-KPL 827
            L D  Q A K + NS+YGY     ARWY  E A  VT  G + I+   R + EK G K L
Sbjct: 478  LLDYRQRAIKILANSYYGYYAYANARWYCRECAESVTAWGRQYIETTMREIEEKFGFKVL 537

Query: 828  ELDTDGIWCVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVS 887
              DTDG +  +PG+  E    K K+    +    P ++                      
Sbjct: 538  YADTDGFFATIPGADAETVKNKAKEFLNYINPRLPGLL---------------------- 575

Query: 888  KTYETHSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGE 947
                       E E +G Y+            + KK+YAV +++  +   +G EI RR  
Sbjct: 576  -----------ELEYEGFYRRGFF--------VTKKKYAVIDEEDKIT-TRGLEIVRRDW 615

Query: 948  LKLIKVFQAELFDKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESST 1007
             ++ K  QA + +  L    +EE    V  V  +          ++   +L+ Y      
Sbjct: 616  SEIAKETQARVLEAILKHGDVEEAVRIVKEVTEKL------SRHEVPPEKLVIY----EQ 665

Query: 1008 MSKSLADYGEQKSCAVTTARRLSDFLGDTMVKDKGLRCQYIVACEPQGTPVSERAVPVAI 1067
            +++ L  Y       V  A+RL+      +    G    YIV   P    V +RA+P   
Sbjct: 666  ITRDLRSY-RATGPHVAVAKRLA---ARGIKIRPGTVISYIVLKGPGR--VGDRAIPFDE 719

Query: 1068 FE 1069
            F+
Sbjct: 720  FD 721


>gi|1749654|dbj|BAA13884.1| unnamed protein product [Schizosaccharomyces pombe]
          Length = 313

 Score =  101 bits (251), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 81/307 (26%), Positives = 141/307 (45%), Gaps = 29/307 (9%)

Query: 1694 VSSWNIAEYLPKEIQDHFVLVVSEFMYIPWKHAQKLAASRASLQ----EGSSCTPSITVA 1749
            V SW+I  +LP  IQ  F   + EF+   +K  QKL  S   +     + ++      + 
Sbjct: 12   VVSWHIKSHLPPIIQPEFQSWIVEFIEEVYK--QKLEKSNTKVGFVRVKNNNADEDSEIV 69

Query: 1750 AAENFESHIVQYVKGEISSYFTGKLLSIVRDAIHHMKKMNNDQHNSPGVMQTAANIHKVD 1809
             +   +S ++  +K +++          VR     ++   N + +        + ++  D
Sbjct: 70   GSGILKSKLIHPLKRKVAQ---------VRRCFQELQLDENTREDLKFPKLPGSFLNYTD 120

Query: 1810 APLEFIKHVCAAFALDQNVQHDVLVMRKNLLKYVRVREFAPEAEFRDPCPSFILPNVICS 1869
              LE +K +CA F L  ++  +V  ++K+LL  ++++EF+ +A FR P     L  + C 
Sbjct: 121  GALELVKSICAVFELSHDLNLEVRFLKKSLLSLLQIQEFSTQAVFRYPSRRLSLDQIPCK 180

Query: 1870 YCNDCRDLDLCR---------DMALL--AQDWHCAMPQCGQPYDREVMENALLQIVRQRE 1918
             C   +D DLC          DM  L  +  W C+   C   YDR V+   L  I   + 
Sbjct: 181  QCGVHQDFDLCLHEHLWPTRDDMGTLVFSDGWSCS--SCNLVYDRWVLRK-LWWITYNQL 237

Query: 1919 RLYHLQDLVCIRCNQVKAAHLAEQCACAGSFRCKEDASDFRSKMQIFLNIANRQGFQLLQ 1978
             LY LQDL+C +C  VK   L E+C+C+G +  +   + FR  + ++ ++A+   F +LQ
Sbjct: 238  TLYQLQDLICSKCKTVKQWSLKERCSCSGEWVLQLSPTKFREMLNVYQSVADFNEFSILQ 297

Query: 1979 ECTSWIL 1985
                 IL
Sbjct: 298  NSVQSIL 304


>gi|355712632|gb|AES04413.1| polymerase , epsilon [Mustela putorius furo]
          Length = 75

 Score =  100 bits (250), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 50/75 (66%), Positives = 54/75 (72%), Gaps = 1/75 (1%)

Query: 831 TDGIWCVLPGSFPENFTFKTKDLKK-KLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKT 889
           TDGIWCVLP SFPENF  KT  +KK KLTISYP  MLN+ V    TNDQYQ L +P S +
Sbjct: 1   TDGIWCVLPNSFPENFVIKTTSVKKPKLTISYPGAMLNIMVKEGFTNDQYQELTEPSSLS 60

Query: 890 YETHSECSIEFEVDG 904
           Y T SE SI FEVDG
Sbjct: 61  YVTRSENSIFFEVDG 75


>gi|67622645|ref|XP_667817.1| DNA polymerase epsilon catalytic subunit -related [Cryptosporidium
            hominis TU502]
 gi|54658980|gb|EAL37583.1| DNA polymerase epsilon catalytic subunit -related [Cryptosporidium
            hominis]
          Length = 1660

 Score =  100 bits (250), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 57/173 (32%), Positives = 85/173 (49%), Gaps = 46/173 (26%)

Query: 1008 MSKSLADYGEQKSCAVTTARRLSDFLGD-TMVKDKGLRCQYIVACEPQGTPVSERAVPVA 1066
            MSKS+   G  KS ++TTA+RL +FL + + ++DK + C++IV+  P+G   S+RAVP++
Sbjct: 1    MSKSVQQMGNAKSMSITTAKRLFEFLQNPSYIQDKNIVCKFIVSEFPKGEDKSQRAVPLS 60

Query: 1067 IFETDAEIMKFYLRKWCKTSSDVG------------------------------------ 1090
            IF T  E    +L KW + S   G                                    
Sbjct: 61   IFSTPLETRISWLSKWLRISKSGGRREKDELVEHRRKADVDITSGSGSGSGSGSGNGILN 120

Query: 1091 ---------IRSIVDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDWL 1134
                     +R+I+DW YYK RL++ I KI+ IPA  Q V NP+P +  P W+
Sbjct: 121  KENETNKWNVRNILDWEYYKNRLTNTILKIVIIPAINQGVPNPLPELEVPSWV 173



 Score = 60.1 bits (144), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 47/210 (22%), Positives = 93/210 (44%), Gaps = 20/210 (9%)

Query: 1565 FADAILQHLYRWLCSPHSKLHDPVLHRILHKVMQKVFAMLLAEFRKLGATIIFANFSKVI 1624
            F   + +  Y WL SP+S L+DP L  +        F  L ++ R++G  +++ N  K+I
Sbjct: 1071 FMVTLQERFYSWLSSPNSLLYDPALIEMTKDYAHWYFKSLESDMREMGIQVVYGNIRKMI 1130

Query: 1625 IDTGKFDLSAAKAYCDS--------LLKALQTRELFEWIELEPVHFWHSLLFMDQYNY-- 1674
            +     +L       +S        L++ L  REL+  I L+P   + +++ +D+ NY  
Sbjct: 1131 LTFNLDELKNNSIRNNSDLQNQFSKLMQILNNRELYSGISLDPTVEYKAMIQIDRTNYIR 1190

Query: 1675 GGIPARADESLDDDSQVDIVSSWNIAEYLPKEIQDHFVLVVSEFMYIPWKHAQKL--AAS 1732
              +       L+D  ++++    ++  Y P   + + V  +S F+  P +  +      S
Sbjct: 1191 RTLGGGGSGGLEDPYEMNL----SLLNYFPVNSRKYIVGEISNFLMEPLRELRNYFKKNS 1246

Query: 1733 RASLQEGSSCTPSITVAA----AENFESHI 1758
              SL+E       I +      +ENF++ +
Sbjct: 1247 NLSLKESLQILGDIVLEQFGPFSENFQNFL 1276



 Score = 48.9 bits (115), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 43/186 (23%), Positives = 76/186 (40%), Gaps = 34/186 (18%)

Query: 1796 PGVMQTAANIHKVDAPLEFIKHVCAAFALDQNVQHD---------VLVMRKNLLKYVRVR 1846
            P  +  A N +K    LE IK     + LD++   D         ++ M   + + V + 
Sbjct: 1430 PPCIGKAYNGNKPSLSLELIKLFIYIWGLDKSFSMDESKQKQYEQIIFM---VCQTVDIS 1486

Query: 1847 EFAP--EAEFRDPCPSFILPNVICSYCNDCRDLDLC-------RDMALLAQD-------- 1889
            EF P    ++  P   +I+ +  C  C +  D D          D+ L + +        
Sbjct: 1487 EFNPIVTEKWTSPLIPYIIKDFSCPNCFEIEDFDFTGNAIQDEDDLGLSSNNYNNIIRPR 1546

Query: 1890 --WHCAMPQCGQPYDREVMENALLQIVRQRERLYHLQDLVCIRCNQVKAAHLAEQC-ACA 1946
              W+C+   C    D E++E  LL    +R  +   QD++C RCN V+ +++ + C  C 
Sbjct: 1547 FTWYCS--HCNFSIDNEILEEKLLLEFFERLEVIQSQDILCSRCNSVQISYMQKHCDECM 1604

Query: 1947 GSFRCK 1952
            G    +
Sbjct: 1605 GELTTR 1610


>gi|262367838|pdb|3A2F|A Chain A, Crystal Structure Of Pyrococcus Furiosus Dna
           PolymerasePCNA Monomer Mutant Complex
          Length = 775

 Score =  100 bits (250), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 108/387 (27%), Positives = 172/387 (44%), Gaps = 66/387 (17%)

Query: 189 CIVDLREYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLLEKRVDLLQRAEVHVCAFDIET 248
            +VD+ EYD+P+  R+ ID  +         I   G             E+ + AFDIET
Sbjct: 105 AVVDIFEYDIPFAKRYLIDKGL---------IPXEG-----------EEELKILAFDIET 144

Query: 249 TKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNVN 308
             L  +  +     I+ ISY  + +  +I  +        DL Y           V  V+
Sbjct: 145 --LYHEGEEFGKGPIIXISYADENEAKVITWKNI------DLPY-----------VEVVS 185

Query: 309 NEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMS-----EELGFQCDK 363
           +E E ++ +   ++E  P I VTYNGD FD+P+L  RA   G K++      E   Q   
Sbjct: 186 SEREXIKRFLRIIREKDPDIIVTYNGDSFDFPYLAKRAEKLGIKLTIGRDGSEPKXQRIG 245

Query: 364 NQGECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRF--AKE 421
           +      K   H D +  + R   LP  +  L+AV +A  G    +V  +++ +   + E
Sbjct: 246 DXTAVEVKGRIHFDLYHVITRTINLP--TYTLEAVYEAIFGKPKEKVYADEIAKAWESGE 303

Query: 422 KPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAY 481
             + +A YS  DA ATY L   ++ P    L+ ++     +V R  +G L E  L+ +AY
Sbjct: 304 NLERVAKYSXEDAKATYELGKEFL-PXEIQLSRLVGQPLWDVSRSSTGNLVEWFLLRKAY 362

Query: 482 KANVICPNKHQSDPEKFYRNHLLESETYIGGHVECLESGVFRSDLPTSFK-LDPSAYEQL 540
           + N + PNK     E+ Y+  L ES  Y GG V+  E G++ + +   F+ L PS    +
Sbjct: 363 ERNEVAPNKPS---EEEYQRRLRES--YTGGFVKEPEKGLWENIVYLDFRALYPSII--I 415

Query: 541 LNNLDRDLQYAIKVEGKMDLESVSNYD 567
            +N+  D          ++LE   NYD
Sbjct: 416 THNVSPDT---------LNLEGCKNYD 433



 Score = 72.0 bits (175), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 67/226 (29%), Positives = 94/226 (41%), Gaps = 46/226 (20%)

Query: 760 KIQEAQDMV--VLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNA- 816
           K +E QD +  +L D  Q A K + NSFYGY     ARWY  E A  VT  G K I+   
Sbjct: 467 KXKETQDPIEKILLDYRQKAIKLLANSFYGYYGYAKARWYCKECAESVTAWGRKYIELVW 526

Query: 817 RLLIEKIG-KPLELDTDGIWCVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNT 875
           + L EK G K L +DTDG++  +PG   E    K  +  K +    P ++          
Sbjct: 527 KELEEKFGFKVLYIDTDGLYATIPGGESEEIKKKALEFVKYINSKLPGLL---------- 576

Query: 876 NDQYQTLVDPVSKTYETHSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLA 935
                                  E E +G YK            + KKRYAV +++G + 
Sbjct: 577 -----------------------ELEYEGFYKRGFF--------VTKKRYAVIDEEGKVI 605

Query: 936 ELKGFEIKRRGELKLIKVFQAELFDKFLHGSTIEECYSAVAAVANR 981
             +G EI RR   ++ K  QA + +  L    +EE    V  V  +
Sbjct: 606 -TRGLEIVRRDWSEIAKETQARVLETILKHGDVEEAVRIVKEVIQK 650


>gi|379318583|pdb|4AHC|A Chain A, Crystal Structure Of An Evolved Replicating Dna Polymerase
 gi|379318584|pdb|4AHC|B Chain B, Crystal Structure Of An Evolved Replicating Dna Polymerase
 gi|379318587|pdb|4AIL|C Chain C, Crystal Structure Of An Evolved Replicating Dna Polymerase
          Length = 775

 Score =  100 bits (248), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 106/387 (27%), Positives = 171/387 (44%), Gaps = 66/387 (17%)

Query: 189 CIVDLREYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLLEKRVDLLQRAEVHVCAFDIET 248
            +VD+ EYD+P+  R+ ID  +                    + +    E+ + AF I T
Sbjct: 105 AVVDIFEYDIPFAKRYLIDKGL--------------------IPMEGEEELKILAFAIAT 144

Query: 249 TKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNVN 308
             L  +  +     I+MISY  + +  +I  +        DL Y           V  V+
Sbjct: 145 --LYHEGEEFGKGPIIMISYADENEAKVITWKNI------DLPY-----------VEVVS 185

Query: 309 NEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMS-----EELGFQCDK 363
           +E E+++ +   ++E  P I VTYNGD FD+P+L  RA   G K++      E   Q   
Sbjct: 186 SEREMIKRFLRIIREKDPDIIVTYNGDSFDFPYLAKRAEKLGIKLTIGRDGSEPKMQRIG 245

Query: 364 NQGECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRF--AKE 421
           +      K   H D +  + R   LP  +  L+AV +A  G    +V  +++ +   + E
Sbjct: 246 DMTAVEVKGRIHFDLYHVITRTINLP--TYTLEAVYEAIFGKPKEKVYADEIAKAWESGE 303

Query: 422 KPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAY 481
             + +A YS+ DA ATY L   ++ P    L+ +I     +V R  +G L E  L+ +AY
Sbjct: 304 NLERVAKYSMEDAKATYELGKEFL-PMEIQLSRLIGQPLWDVSRSSTGNLVEWFLLRKAY 362

Query: 482 KANVICPNKHQSDPEKFYRNHLLESETYIGGHVECLESGVFRSDLPTSF-KLDPSAYEQL 540
           + N + PNK     E+ Y+  L ES  Y GG V+  E G++   +   F  L PS    +
Sbjct: 363 ERNEVAPNKPS---EEEYQRRLRES--YTGGFVKEPEKGLWDDIVYLDFIALYPSII--I 415

Query: 541 LNNLDRDLQYAIKVEGKMDLESVSNYD 567
            +N+  D          ++LE   NYD
Sbjct: 416 THNVSPDT---------LNLEGCKNYD 433



 Score = 70.9 bits (172), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 67/226 (29%), Positives = 94/226 (41%), Gaps = 46/226 (20%)

Query: 760 KIQEAQDMV--VLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNA- 816
           K++E QD +  +L D  Q A K + NSFYGY     ARWY  E A  VT  G K I+   
Sbjct: 467 KMKETQDPIEKILLDYRQKAIKLLANSFYGYYGYAKARWYCKECAESVTAWGRKYIELVW 526

Query: 817 RLLIEKIG-KPLELDTDGIWCVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNT 875
           + L EK G K L +DTDG+   +PG   E    K  +  K +    P ++          
Sbjct: 527 KELEEKFGFKVLYIDTDGLHATIPGGESEEIKKKALEFVKYINSKLPGLL---------- 576

Query: 876 NDQYQTLVDPVSKTYETHSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLA 935
                                  E E +G YK            + KKRYAV +++G + 
Sbjct: 577 -----------------------ELEYEGFYKRGFF--------VTKKRYAVIDEEGKVI 605

Query: 936 ELKGFEIKRRGELKLIKVFQAELFDKFLHGSTIEECYSAVAAVANR 981
             +G EI RR   ++ K  QA + +  L    +EE    V  V  +
Sbjct: 606 -TRGLEIVRRDWSEIAKETQARVLETILKHGDVEEAVRIVKEVIQK 650


>gi|289192745|ref|YP_003458686.1| DNA polymerase Pol2 [Methanocaldococcus sp. FS406-22]
 gi|288939195|gb|ADC69950.1| DNA polymerase Pol2 [Methanocaldococcus sp. FS406-22]
          Length = 2137

 Score = 99.8 bits (247), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 89/353 (25%), Positives = 158/353 (44%), Gaps = 41/353 (11%)

Query: 189 CIVDLREYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLLEKRVDLLQRAEVHVCAFDIET 248
            + ++ E+D+P+  R+ IDN++    ++D           K+   ++  ++   AFD+E 
Sbjct: 110 IVKEIYEHDIPFAKRYLIDNEIVPMTYWDFE--------NKKPVSIEIPKLKAVAFDMEV 161

Query: 249 TKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNVN 308
                + P+ + D I+M S+  +  G +I  ++    +IE +E                 
Sbjct: 162 YNRDTE-PNPERDPILMASFWDENGGKVITYKQFNHPNIEVVE----------------- 203

Query: 309 NEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMS-----EELGFQCDK 363
           NE  L++     +++    I  TYNGD FD+P+L+ RA  +G  ++     EEL  +   
Sbjct: 204 NEKMLIKRIIETLKQY--DIIYTYNGDNFDFPYLKARAKLYGIDINLGKDGEELKIKRGG 261

Query: 364 NQGECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKP 423
            +         H+D +   +R   L      L+ V       + L++    +V +     
Sbjct: 262 MEYRSYIPGRVHIDLYPISRR--LLKLTKYTLEDVVYNLFSIEKLKIPHTKIVEYWANND 319

Query: 424 QMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKA 483
           +++  YS+ DA  TY +  TY  P     + I+  +  E+ R  SG + E LLM  A+K 
Sbjct: 320 EILIEYSLQDAKYTYKI-GTYFFPLEVMFSRIVNQTLFEITRMTSGQMVEYLLMKNAFKE 378

Query: 484 NVICPNKHQSDPEKFYRNHLLESETYIGGHVECLESGVFRSDLPTSFKLDPSA 536
           N+I PNK     EK Y+  +  S TY GG+V+  E G+F   +   F+  P  
Sbjct: 379 NMIVPNKPD---EKEYKMRV--STTYEGGYVKEPEKGMFEDIISMDFRCHPKG 426



 Score = 53.1 bits (126), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 67/263 (25%), Positives = 104/263 (39%), Gaps = 54/263 (20%)

Query: 783  NSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIG-KPLELDTDGIWCVLPGS 841
            NS YGY+    AR+YS E A VVTY G K I       EK G K L +DTDG + +    
Sbjct: 1861 NSVYGYLAFPRARFYSRECAEVVTYLGRKYILETVKEAEKFGFKVLYVDTDGFYAIWKEK 1920

Query: 842  FP-ENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEF 900
               E    K  +  + +    P  M                                 E 
Sbjct: 1921 ISKEELIKKAMEFVEYINSKLPGTM---------------------------------EL 1947

Query: 901  EVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFD 960
            E +G +K  I         + KKRYA+ ++ G +  +KG E  RR    + K+ Q ++ +
Sbjct: 1948 EFEGYFKRGIF--------VTKKRYALIDESGRVT-VKGLEFVRRDWSNIAKITQRKVLE 1998

Query: 961  KFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDY--ISESSTMSKSLADYGEQ 1018
              L   +IE+    +  V      + D + K I   +LI Y  +++     K+ A + E 
Sbjct: 1999 ALLVEGSIEKAKKIIQDV------IKDLREKKIKKEDLIIYTQLTKDPKEYKTTAPHVEI 2052

Query: 1019 KSCAVTTARRL--SDFLGDTMVK 1039
                +   +R+   D +G  +VK
Sbjct: 2053 AKKLMREGKRIKVGDIIGYIIVK 2075


>gi|7546394|pdb|1D5A|A Chain A, Crystal Structure Of An Archaebacterial Dna Polymerase
           D.Tok. Deposition Of Second Native Structure At 2.4
           Angstrom
          Length = 733

 Score = 99.4 bits (246), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 97/355 (27%), Positives = 159/355 (44%), Gaps = 56/355 (15%)

Query: 189 CIVDLREYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLLEKRVDLLQRAEVHVCAFDIET 248
            +VD+ EYD+P+  R+ ID  +                    + +    E+ + AFDIET
Sbjct: 105 AVVDIYEYDIPFAKRYLIDRGL--------------------IPMEGDEELRMLAFDIET 144

Query: 249 TKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNVN 308
             L      A    I+MISY  D +G  +I  + +     DL Y           V +V+
Sbjct: 145 --LAHAGAAAGAGPILMISYA-DEEGARVITWKNI-----DLPY-----------VESVS 185

Query: 309 NEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKM-----SEELGFQCDK 363
            E E+++ +   +QE  P + +TYNGD FD+ +L+ R+   G K        E   Q   
Sbjct: 186 TEKEMIKRFLKVIQEKDPDVLITYNGDNFDFAYLKKRSEMLGVKFILGRDGSEPKIQRMG 245

Query: 364 NQGECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVR--FAKE 421
           ++     K   H D +  ++R   LP  +  L+ V +   G    +V  E++     + E
Sbjct: 246 DRFAVEVKGRIHFDLYPVIRRTINLP--TYTLETVYEPVFGQPAEKVYAEEIAEAWASGE 303

Query: 422 KPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAY 481
             + +A YS+ DA ATY L   +  P    L+ ++  S  +V R  +G L E  L+ +AY
Sbjct: 304 GLERVARYSMEDAKATYELGKEF-FPMEAQLSRLVGQSLWDVSRSSTGNLVEWFLLRKAY 362

Query: 482 KANVICPNKHQSDPEKFYRNHLLESETYIGGHVECLESGVFRSDLPTSFK-LDPS 535
           + N + PNK         R     +E+Y GG+V+  E G++ + +   +K L PS
Sbjct: 363 ERNDVAPNKPDE------RELARRTESYAGGYVKEPEKGLWENIVYLDYKSLYPS 411



 Score = 45.4 bits (106), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 58/214 (27%), Positives = 85/214 (39%), Gaps = 44/214 (20%)

Query: 770 LYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNA-RLLIEKIG-KPL 827
           L D  Q A K + NS+YGY     ARWY  E A  VT  G + I+   R + EK G K L
Sbjct: 478 LLDYRQRAIKILANSYYGYYAYANARWYCRECAESVTAWGRQYIETTMREIEEKFGFKVL 537

Query: 828 ELDTDGIWCVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVS 887
             DTDG +  +PG+  E    K K+    +    P ++                      
Sbjct: 538 YADTDGFFATIPGADAETVKNKAKEFLNYINPRLPGLL---------------------- 575

Query: 888 KTYETHSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGE 947
                      E E +G Y+            + KK+YAV +++  +   +G EI RR  
Sbjct: 576 -----------ELEYEGFYRRGFF--------VTKKKYAVIDEEDKIT-TRGLEIVRRDW 615

Query: 948 LKLIKVFQAELFDKFLHGSTIEECYSAVAAVANR 981
            ++ K  QA + +  L    +EE    V  V  +
Sbjct: 616 SEIAKETQARVLEAILKHGDVEEAVRIVKEVTEK 649


>gi|341582140|ref|YP_004762632.1| DNA-directed DNA polymerase, B family (pol) [Thermococcus sp. 4557]
 gi|340809798|gb|AEK72955.1| DNA-directed DNA polymerase, B family (pol) [Thermococcus sp. 4557]
          Length = 775

 Score = 99.4 bits (246), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 97/355 (27%), Positives = 160/355 (45%), Gaps = 56/355 (15%)

Query: 189 CIVDLREYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLLEKRVDLLQRAEVHVCAFDIET 248
            +VD+ EYD+P+  R+ ID  +                    + +    E+ + +FDIET
Sbjct: 105 AVVDIYEYDIPFAKRYLIDKGL--------------------IPMEGDEELKLLSFDIET 144

Query: 249 TKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNVN 308
             L  +  +     I+MISY  +G+  +I  ++       DL Y           V  V+
Sbjct: 145 --LYHEGEEFGTGPILMISYADEGEARVITWKKI------DLPY-----------VDVVS 185

Query: 309 NEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMS-----EELGFQCDK 363
            E E+++ +   ++E  P + +TYNGD FD+ +L+ R    G K +      E   Q   
Sbjct: 186 TEKEMIKRFLKVVKEKDPDVLITYNGDNFDFAYLKKRCEKLGIKFTLGRDGSEPKIQRMG 245

Query: 364 NQGECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRF--AKE 421
           ++     K   H D +  ++R   LP  +  L+AV +A  G    +V PE++ R     E
Sbjct: 246 DRFAVEVKGRIHFDLYPVIRRTINLP--TYTLEAVYEAVFGKPKEKVYPEEITRAWETGE 303

Query: 422 KPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAY 481
             + +A YS+ DA  TY L   +  P    L+ +I  S  +V R  +G L E  L+ +AY
Sbjct: 304 GLERVARYSMEDAKVTYELGREFF-PMEAQLSRLIGQSLWDVSRSSTGNLVEWFLLRKAY 362

Query: 482 KANVICPNKHQSDPEKFYRNHLLESETYIGGHVECLESGVFRSDLPTSFK-LDPS 535
           + N + PNK   D  +  R        Y GG+V+  E G++ + +   F+ L PS
Sbjct: 363 ERNELAPNK--PDERELARRR----GGYAGGYVKEPERGLWDNIVYLDFRSLYPS 411



 Score = 43.5 bits (101), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 60/214 (28%), Positives = 82/214 (38%), Gaps = 44/214 (20%)

Query: 770 LYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNA-RLLIEKIG-KPL 827
           L D  Q A K + NS+YGY     ARWY  E A  VT  G   I+   R L EK G K L
Sbjct: 478 LLDYRQRAIKILANSYYGYYAYARARWYCKECAESVTAWGRDYIEMVIRELEEKFGFKVL 537

Query: 828 ELDTDGIWCVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVS 887
             DTDG+   +PG   E    K     K +    P ++                      
Sbjct: 538 YADTDGLHATIPGMDAETVRKKAMVFLKYINAKLPGLL---------------------- 575

Query: 888 KTYETHSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGE 947
                      E E +G Y             + KK+YAV +++G +   +G EI RR  
Sbjct: 576 -----------ELEYEGFYVRGFF--------VTKKKYAVIDEEGKIT-TRGLEIVRRDW 615

Query: 948 LKLIKVFQAELFDKFLHGSTIEECYSAVAAVANR 981
            ++ K  QA + +  L    +EE    V  V  +
Sbjct: 616 SEIAKETQARVLEAILRHGDVEEAVRIVKDVTEK 649


>gi|195053416|ref|XP_001993622.1| GH20097 [Drosophila grimshawi]
 gi|193895492|gb|EDV94358.1| GH20097 [Drosophila grimshawi]
          Length = 199

 Score = 98.6 bits (244), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 54/139 (38%), Positives = 79/139 (56%), Gaps = 6/139 (4%)

Query: 1845 VREFAPEAEFRDPCPSFILPNVICSYCNDCRDLDLCRDMALLAQD----WHCAMPQCGQP 1900
            V EF+  A++ DPC + I+  VIC  CN CRDLDLC+D     +D    W CA  QC   
Sbjct: 53   VGEFSDLADWTDPCDTHIINEVICKACNHCRDLDLCKDKQRALKDGIPVWLCA--QCYVA 110

Query: 1901 YDREVMENALLQIVRQRERLYHLQDLVCIRCNQVKAAHLAEQCACAGSFRCKEDASDFRS 1960
            YD E +E  ++ +++ +   Y LQDL C+ CN++K  +LAE C  AG+F       +  +
Sbjct: 111  YDNEEIEMRMIDVLQHKVMSYVLQDLRCVCCNEIKRENLAEFCTYAGNFVPLISGKEIET 170

Query: 1961 KMQIFLNIANRQGFQLLQE 1979
             +  F N+A+    QLLQ+
Sbjct: 171  LLNTFNNVASYHKMQLLQQ 189


>gi|296109913|ref|YP_003616862.1| DNA polymerase Pol2 [methanocaldococcus infernus ME]
 gi|295434727|gb|ADG13898.1| DNA polymerase Pol2 [Methanocaldococcus infernus ME]
          Length = 757

 Score = 98.6 bits (244), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 117/464 (25%), Positives = 198/464 (42%), Gaps = 95/464 (20%)

Query: 82  YKFRPYFYA-----ATKEKMEMDVEAYLRRRYESQIADIEILEKEDLDLKNHLSGLHKSY 136
           Y F+PYFY      A +E +E   +  LR+     + D+EI++K                
Sbjct: 31  YNFKPYFYVELYEDAKEEDIEEVKKFLLRKDLLKFVEDMEIVKK---------------- 74

Query: 137 LKISFDTVQQLMDVKKDLLHVVERNQAKFDAAEAYESILTGKREQRPQDFLDCIVDLREY 196
                    +++  +KD+L ++  +  K       +               + + ++ E+
Sbjct: 75  ---------RIIREEKDILKIIATHPQKVPKLRVIKE-------------FEKVKEIYEH 112

Query: 197 DVPYHIRFAIDNDVRCGQWYDVSISSTGPLLEKRVDLLQRAEVHVCAFDIETTKLPLKFP 256
           D+P+  R+ IDND+    ++D          +KRV   +  E+ + AFDIE         
Sbjct: 113 DIPFAKRYMIDNDIVPMIYFDFE--------KKRVVSDKLPELKMVAFDIEVVD------ 158

Query: 257 DADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNVNNEIELLRL 316
               + I+M S+  +  G ++  ++   E +E      K E E   K+      IE+L+ 
Sbjct: 159 ----NKIIMASFWDEKGGKVLTYKDFSHESVE----LVKDEKELILKI------IEILKN 204

Query: 317 WFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDKNQGECRAKF---- 372
           +          +  TYNGDY+D+PFL+ RA  +G K+    G +  K +     K     
Sbjct: 205 Y---------DLIFTYNGDYYDFPFLKERAKFYGLKVKLGRGGEEIKIKRGVETKVYIPG 255

Query: 373 ACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQMMASYSVS 432
             H+D +   KR   L      L+ V       + L++  ++ V + ++K  ++  YS+ 
Sbjct: 256 RVHIDLYPIAKR--LLKLTKYTLEDVVYNLFNVEKLKI--KNFVEYWEDKDNILVEYSLQ 311

Query: 433 DAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVICPNKHQ 492
           DA  T YL   Y  P     + II     EV R  S  + E LLM +AYK N I PNK  
Sbjct: 312 DAKYT-YLIGKYFLPLEVMFSRIINQVLFEVTRMSSSQMVEYLLMKRAYKLNYIVPNKPS 370

Query: 493 SDPEKFYRNHLLESETYIGGHVECLESGVFRSDLPTSFK-LDPS 535
              E+ Y+  +  +E+Y GG+V+    G+  + +   FK L PS
Sbjct: 371 ---EEEYKRRV--AESYEGGYVKEPIKGIHENIVYLDFKSLYPS 409



 Score = 45.4 bits (106), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 79/293 (26%), Positives = 121/293 (41%), Gaps = 71/293 (24%)

Query: 760  KIQEAQDMVVLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLL 819
            ++++ +D ++ Y+  Q + K + NS YGY+    AR+Y+   A ++T+ G K I      
Sbjct: 463  RLKKEKDKLLNYE--QQSLKILANSVYGYLAYPRARFYNKVCAEIITFLGRKYIMETIKE 520

Query: 820  IEKIG-KPLELDTDGIWCVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQ 878
             E  G   L  DTDGI+  + G   EN   K   LKK               A N  N  
Sbjct: 521  AEVFGFTVLYADTDGIFLTIKG---EN---KEAILKK---------------AYNFLNHI 559

Query: 879  YQTLVDPVSKTYETHSECSIEFEVDGPYKAMILPASKEEGILI-KKRYAVFNDDGTLAEL 937
               L +             +E E +G Y           GI I KK+YA+  ++G +  +
Sbjct: 560  NSKLPE------------DMELEFEGFY---------SRGIFITKKKYALITEEGEII-I 597

Query: 938  KGFEIKRRGELKLIKVFQAELFDKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSE 997
            KG E  RR    + K  Q E+ +  L    IE+    +     +  +L      ++   E
Sbjct: 598  KGLEYVRRDWSGIAKRTQKEVLEALLKEGDIEKAKKIIKETIKKLRNL------EVDKEE 651

Query: 998  LIDYISESSTMSKSLADYGEQKSCA--VTTARRL---------SDFLGDTMVK 1039
            LI Y    + ++K L +Y   KS A  V  A+RL          D LG  +VK
Sbjct: 652  LIIY----TQITKDLNEY---KSTAPHVELAKRLVREGKKIKPGDVLGYIIVK 697


>gi|17375628|sp|Q9HH05.1|DPOL_THEHY RecName: Full=DNA polymerase; Contains: RecName: Full=Endonuclease
           PI-ThyII; AltName: Full=Thy pol-1 intein; Contains:
           RecName: Full=Endonuclease PI-ThyI; AltName: Full=Thy
           pol-2 intein
 gi|11602745|emb|CAC18555.1| DNA polymerase and endonucleases [Thermococcus hydrothermalis]
          Length = 1668

 Score = 98.6 bits (244), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 93/341 (27%), Positives = 152/341 (44%), Gaps = 55/341 (16%)

Query: 189 CIVDLREYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLLEKRVDLLQRAEVHVCAFDIET 248
            +VD+ EYD+P+  R+ ID  +                    + +    E+ + +FDIET
Sbjct: 72  AVVDIYEYDIPFAKRYLIDKGL--------------------IPMEGDEELKMMSFDIET 111

Query: 249 TKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNVN 308
             L  +  +     I+MISY  +G+  +I  ++       DL Y           V  V+
Sbjct: 112 --LYHEGEEFGTGPILMISYADEGEARVITWKKI------DLPY-----------VEVVS 152

Query: 309 NEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMS-----EELGFQCDK 363
            E E+++ +   ++E  P + +TYNGD FD+ +L+ R    G K +      E   Q   
Sbjct: 153 TEKEMIKRFLKVVKEKDPDVLITYNGDNFDFAYLKKRCEKIGIKFTLRRDGSEPKIQRMG 212

Query: 364 NQGECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRF--AKE 421
           ++     K   H D +  ++R   LP  +  L+AV +A  G    +V PE++       E
Sbjct: 213 DRFAVEVKGRIHFDLYPVIRRTINLP--TYTLEAVYEAVFGTPKEKVYPEEITTAWETGE 270

Query: 422 KPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAY 481
             + +A YS+ DA  TY L   +  P    L+ +I  S  +V R  +G L E  L+ +AY
Sbjct: 271 GLERVARYSMEDAKVTYELGREFF-PMEAQLSRLIGQSLWDVSRSSTGNLVEWFLLRKAY 329

Query: 482 KANVICPNKHQSDPEKFYRNHLLESETYIGGHVECLESGVF 522
           + N I PNK   D  +  R        Y GG+V+  E G++
Sbjct: 330 ERNEIAPNK--PDERELARRR----GGYAGGYVKEPERGLW 364


>gi|10799869|emb|CAC12847.1| DNA polymerase [Pyrococcus sp. ST700]
          Length = 759

 Score = 98.6 bits (244), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 129/477 (27%), Positives = 197/477 (41%), Gaps = 99/477 (20%)

Query: 73  QDGSTFKSKY--KFRPYFYAATKEKMEMDVEAYLRRRYESQIADIEILEKEDLDLKNHLS 130
           ++   FK +Y   FRPY YA  K+   +D                        D++   S
Sbjct: 21  KENGKFKVEYDRNFRPYIYALLKDDSAID------------------------DVRKITS 56

Query: 131 GLHKSYLKISFDTVQQLMDV----KKDLLHVVERNQAKFDAAEAYESILTGKREQRPQDF 186
             H          V +++DV    KK L   +E  +  F+  +   +I    RE      
Sbjct: 57  ERH--------GKVVRVIDVEKVSKKFLGRPIEVWKLYFEHPQDVPAIRDKIREH----- 103

Query: 187 LDCIVDLREYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLLEKRVDLLQRAEVHVCAFDI 246
              ++D+ EYD+P+  R+ ID  +                    + +    E+   A DI
Sbjct: 104 -PAVIDIFEYDIPFAKRYLIDKGL--------------------IPMEGNEELSFLAVDI 142

Query: 247 ETTKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTN 306
           ET  L  +  +     I+MISY  D +G  +I  + +     DL Y           V  
Sbjct: 143 ET--LYHEGEEFGKGPIIMISYA-DEEGAKVITWKKI-----DLPY-----------VEV 183

Query: 307 VNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDKNQ- 365
           V NE E+++     ++E  P I +TYNGD FD+P+L  RA   G K+         K Q 
Sbjct: 184 VANEREMIKRLVRIIREKDPDIIITYNGDNFDFPYLLKRAEKLGIKLPLGRDNSEPKMQR 243

Query: 366 -GECRA---KFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRF--A 419
            GE  A   K   H D F  ++R   LP  +  L+ V +A  G    +V P ++      
Sbjct: 244 LGESLAVEIKGRIHFDLFPVIRRTINLP--TYTLRTVYEAIFGKPKEKVYPHEIAEAWET 301

Query: 420 KEKPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQ 479
            +  + +A YS+ DA  TY L   +  P    LA ++     +V R  +G L E  L+ +
Sbjct: 302 GKGLERVAKYSMEDAKVTYELGKEFF-PMEAQLARLVGQPVWDVSRSSTGNLVEWFLLRK 360

Query: 480 AYKANVICPNKHQSDPEKFYRNHLLESETYIGGHVECLESGVFRSDLPTSFK-LDPS 535
           AY+ N + PNK     EK Y   L ES  Y GG+V+  E G++   +   F+ L PS
Sbjct: 361 AYERNELAPNKPD---EKEYEKRLRES--YEGGYVKEPEKGLWEGIVSLDFRSLYPS 412



 Score = 63.2 bits (152), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 82/321 (25%), Positives = 139/321 (43%), Gaps = 62/321 (19%)

Query: 760  KIQEAQDMV--VLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNAR 817
            +++E++D +   L D  Q A K + NSFYGY     ARWY  E A  VT  G + I+  R
Sbjct: 467  RMKESKDPIEKKLLDYRQRAIKILANSFYGYYGYAKARWYCKECAESVTAWGRQYIELVR 526

Query: 818  LLIEKIG-KPLELDTDGIWCVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTN 876
              +E+ G K L +DTDG++  +PG        K  +  K+  + +           N  N
Sbjct: 527  RELEERGFKVLYIDTDGLYATIPGE-------KNWEEIKRKALEFV----------NYIN 569

Query: 877  DQYQTLVDPVSKTYETHSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAE 936
             +   +               +E E +G Y             + KK+YA+ +++G +  
Sbjct: 570  SKLPGI---------------LELEYEGFYTRGFF--------VTKKKYALIDEEGKII- 605

Query: 937  LKGFEIKRRGELKLIKVFQAELFDKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADS 996
             +G EI RR   ++ K  QA++ +  L    +EE    V  V  +    L N   +I   
Sbjct: 606  TRGLEIVRRDWSEIAKETQAKVLEAILKHGNVEEAVKIVKEVTEK----LSNY--EIPVE 659

Query: 997  ELIDYISESSTMSKSLADYGEQKSCAVTTARRLSDFLGDTMVKDKGLRCQYIVACEPQGT 1056
            +L+ Y      +++ L +Y +     V  A+RL+      +    G+   Y++       
Sbjct: 660  KLVIY----EQITRPLNEY-KAIGPHVAVAKRLA---AKGIKIKPGMVIGYVLLR--GDG 709

Query: 1057 PVSERAVPVAIFETDAEIMKF 1077
            P+S+RA  +AI E D +  K+
Sbjct: 710  PISKRA--IAIEEFDGKKHKY 728


>gi|86753391|gb|ABD14869.1| PolA precursor [Thermococcus sp. GT]
          Length = 1701

 Score = 98.2 bits (243), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 92/341 (26%), Positives = 152/341 (44%), Gaps = 55/341 (16%)

Query: 189 CIVDLREYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLLEKRVDLLQRAEVHVCAFDIET 248
            ++D+ EYD+P+  R+ ID  +                    + +    E+ + +FDIET
Sbjct: 105 AVIDIYEYDIPFAKRYLIDRGL--------------------IPMEGDEELKMMSFDIET 144

Query: 249 TKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNVN 308
             L  +  +     I+MISY  +G+  +I  ++       DL Y           V  V+
Sbjct: 145 --LYHEGEEFGTGPILMISYADEGEARVITWKKI------DLPY-----------VEVVS 185

Query: 309 NEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMS-----EELGFQCDK 363
            E E+++ +   ++E  P + +TYNGD FD+ +L+ R    G K +      E   Q   
Sbjct: 186 TEKEMIKRFLKVVKEKDPDVLITYNGDNFDFAYLKKRCEKLGIKFTLGRDGSEPKIQRMG 245

Query: 364 NQGECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRF--AKE 421
           ++     K   H D +  ++R   LP  +  L+AV +A  G    +V PE++       E
Sbjct: 246 DRFAVEVKGRIHFDLYPVIRRTINLP--TYTLEAVYEAVFGTPKEKVYPEEITTAWETGE 303

Query: 422 KPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAY 481
             + +A YS+ DA  TY L   +  P    L+ +I  S  +V R  +G L E  L+ +AY
Sbjct: 304 GLERVARYSMEDAKVTYELGREFF-PMEAQLSRLIGQSLWDVSRSSTGNLVEWFLLRKAY 362

Query: 482 KANVICPNKHQSDPEKFYRNHLLESETYIGGHVECLESGVF 522
           + N I PNK   D  +  R        Y GG+V+  E G++
Sbjct: 363 ERNEIAPNK--PDERELARRR----GGYAGGYVKEPERGLW 397


>gi|6706000|dbj|BAA06142.2| DNA-dependent DNA polymerase [Pyrococcus sp.]
          Length = 1671

 Score = 97.4 bits (241), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 101/388 (26%), Positives = 172/388 (44%), Gaps = 66/388 (17%)

Query: 189 CIVDLREYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLLEKRVDLLQRAEVHVCAFDIET 248
            ++D+ EYD+P+  R+ ID  +                    V +    E+ + AFDIET
Sbjct: 105 AVIDIYEYDIPFAKRYLIDKGL--------------------VPMEGDEELKMLAFDIET 144

Query: 249 TKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNVN 308
             L  +  +     I+MISY  D +G  +I  + V     DL Y           V  V+
Sbjct: 145 --LYHEGEEFAEGPILMISYA-DEEGARVITWKNV-----DLPY-----------VDVVS 185

Query: 309 NEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMS-----EELGFQCDK 363
            E E+++ +   ++E  P + +TYNGD FD+ +L+ R    G   +      E   Q   
Sbjct: 186 TEREMIKRFLRVVKEKDPDVLITYNGDNFDFAYLKKRCEKLGINFALGRDGSEPKIQRMG 245

Query: 364 NQGECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRF--AKE 421
           ++     K   H D +  ++R   LP  +  L+AV +A  G    +V  E++       E
Sbjct: 246 DRFAVEVKGRIHFDLYPVIRRTINLP--TYTLEAVYEAVFGQPKEKVYAEEITTAWETGE 303

Query: 422 KPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAY 481
             + +A YS+ DA  TY L   ++ P    L+ +I  S  +V R  +G L E  L+ +AY
Sbjct: 304 NLERVARYSMEDAKVTYELGKEFL-PMEAQLSRLIGQSLWDVSRSSTGNLVEWFLLRKAY 362

Query: 482 KANVICPNKHQSDPEKFYRNHLLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQLL 541
           + N + PNK   D ++  R      ++Y GG+V+  E G++ + +   F+  P+      
Sbjct: 363 ERNELAPNK--PDEKELARRR----QSYEGGYVKEPERGLWENIVYLDFRCHPA------ 410

Query: 542 NNLDRDLQYAIKVEGKMDLESVSNYDEV 569
                D +  +K +G +++  V   D V
Sbjct: 411 -----DTKVVVKGKGIINISEVQEGDYV 433



 Score = 40.8 bits (94), Expect = 8.3,   Method: Compositional matrix adjust.
 Identities = 45/188 (23%), Positives = 71/188 (37%), Gaps = 44/188 (23%)

Query: 796  WYSMEMAGVVTYTGAK-IIQNARLLIEKIG-KPLELDTDGIWCVLPGSFPENFTFKTKDL 853
            WY  E A  VT  G + I    + + EK G K +  DTDG +  +PG+  E    K  + 
Sbjct: 1401 WYCKECAESVTAWGREYITMTIKEIEEKYGFKVIYSDTDGFFATIPGADAETVKKKAMEF 1460

Query: 854  KKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEFEVDGPYKAMILPA 913
             K +    P                                  ++E E +G YK      
Sbjct: 1461 LKYINAKLP---------------------------------GALELEYEGFYKRGFF-- 1485

Query: 914  SKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFLHGSTIEECYS 973
                  + KK+YAV +++G +   +G EI RR   ++ K  QA + +  L    +E+   
Sbjct: 1486 ------VTKKKYAVIDEEGKIT-TRGLEIVRRDWSEIAKETQARVLEALLKDGDVEKAVR 1538

Query: 974  AVAAVANR 981
             V  V  +
Sbjct: 1539 IVKEVTEK 1546


>gi|333910025|ref|YP_004483758.1| DNA polymerase Pol2 [Methanotorris igneus Kol 5]
 gi|333750614|gb|AEF95693.1| DNA polymerase Pol2 [Methanotorris igneus Kol 5]
          Length = 781

 Score = 97.4 bits (241), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 97/355 (27%), Positives = 162/355 (45%), Gaps = 42/355 (11%)

Query: 187 LDCIVDLREYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLLEKRVDLLQRAEVHVCAFDI 246
           LD ++D+ E+D+P+  R+ IDN++    ++D   +       KR D+    ++   AFD+
Sbjct: 101 LDEVLDIYEHDIPFAKRYLIDNELIPMTYWDFEKNKI-----KRKDI---PKLKAIAFDM 152

Query: 247 ETTKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTN 306
           E      + PD   D I+M S+                ED + +  T KP    Y +V  
Sbjct: 153 EVYNRNAE-PDPQKDPILMASFY--------------AEDFKKV-ITYKPFSHEYVEV-- 194

Query: 307 VNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMS-----EELGFQC 361
           V +E EL+      ++     I  TYNGD FD+P+L+ RA  +G K++     EE+    
Sbjct: 195 VKDEKELIERIIEILKNY--DIIYTYNGDNFDFPYLKKRAEVYGIKLNLGRDGEEIKISK 252

Query: 362 DKNQGECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKE 421
                        H+D ++  +R  +L +    L+ V     G   LEV  +++ +  +E
Sbjct: 253 GGMHLRSYIPGRVHIDLYSIARRLLHLTK--YKLEDVALELFGVKKLEVGHQNIGKLWEE 310

Query: 422 KPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAY 481
             + +  YS  DA+ T+ +   Y  P     + I+  +  E+ R  S  + E LL+  A+
Sbjct: 311 NDEKLIEYSFQDALYTFKI-GEYFLPLEVMFSRIVNQTLFEITRMSSSQMVEYLLLKNAF 369

Query: 482 KANVICPNKHQSDPEKFYRNHLLESETYIGGHVECLESGVFRSDLPTSFK-LDPS 535
           K N I PNK  ++    Y+  L   E+Y GG+V+    G+  S +   FK L PS
Sbjct: 370 KNNTIAPNKPSNEE---YQRRL--KESYEGGYVKEPIRGMHESIVSFDFKALYPS 419



 Score = 58.2 bits (139), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 75/294 (25%), Positives = 125/294 (42%), Gaps = 58/294 (19%)

Query: 770  LYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIG-KPLE 828
            L+D  Q + K + NS YGY+    ARWYS E A VVTY G K IQ      EK G + + 
Sbjct: 489  LFDYEQKSLKILANSHYGYLAFPRARWYSKECAEVVTYLGRKYIQQTIKEAEKFGFRVIY 548

Query: 829  LDTDGIWCVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSK 888
             DTDG + +          +K K                  ++++    +    +D ++ 
Sbjct: 549  SDTDGFYAI----------WKEK------------------ISKDELIKKVHEFLDMIN- 579

Query: 889  TYETHSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGEL 948
               +    ++E E +G YK  I         + KKRYA+ +++  +  +KG E  RR   
Sbjct: 580  ---SRLPGNMELEFEGFYKRGIF--------VTKKRYALIDENNKIT-IKGLEFVRRDWA 627

Query: 949  KLIKVFQAELFDKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTM 1008
             + K  Q  + +  L    +E+    +  V +   DL   +GK +   +LI Y    + +
Sbjct: 628  NIAKKTQKAVLETLLIEGDVEKATKIIQDVVD---DL--KKGK-VNKEDLIIY----TQL 677

Query: 1009 SKSLADYGEQKSCAVTTARRLSDFLGDTMVKDKGLRCQYIVACEPQGTPVSERA 1062
            +K   +Y +  +  V  A+R+    G   + D      YI+    +   +SERA
Sbjct: 678  TKDPKEY-KTTAPHVEVAKRILKKGGRLRIGD---VIGYIITSGEKS--ISERA 725


>gi|57639936|ref|YP_182414.1| DNA-dependent DNA polymerase family B protein [Thermococcus
           kodakarensis KOD1]
 gi|62297675|sp|P77933.3|DPOL_PYRKO RecName: Full=DNA polymerase; Contains: RecName: Full=Endonuclease
           PI-PkoI; AltName: Full=IVS-A; AltName: Full=Pko pol-1
           intein; Contains: RecName: Full=Endonuclease PI-PkoII;
           AltName: Full=IVS-B; AltName: Full=Pko pol-2 intein
 gi|57158260|dbj|BAD84190.1| DNA-directed DNA polymerase, family B [Thermococcus kodakarensis
           KOD1]
          Length = 1671

 Score = 97.4 bits (241), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 101/388 (26%), Positives = 172/388 (44%), Gaps = 66/388 (17%)

Query: 189 CIVDLREYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLLEKRVDLLQRAEVHVCAFDIET 248
            ++D+ EYD+P+  R+ ID  +                    V +    E+ + AFDIET
Sbjct: 105 AVIDIYEYDIPFAKRYLIDKGL--------------------VPMEGDEELKMLAFDIET 144

Query: 249 TKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNVN 308
             L  +  +     I+MISY  D +G  +I  + V     DL Y           V  V+
Sbjct: 145 --LYHEGEEFAEGPILMISYA-DEEGARVITWKNV-----DLPY-----------VDVVS 185

Query: 309 NEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMS-----EELGFQCDK 363
            E E+++ +   ++E  P + +TYNGD FD+ +L+ R    G   +      E   Q   
Sbjct: 186 TEREMIKRFLRVVKEKDPDVLITYNGDNFDFAYLKKRCEKLGINFALGRDGSEPKIQRMG 245

Query: 364 NQGECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRF--AKE 421
           ++     K   H D +  ++R   LP  +  L+AV +A  G    +V  E++       E
Sbjct: 246 DRFAVEVKGRIHFDLYPVIRRTINLP--TYTLEAVYEAVFGQPKEKVYAEEITTAWETGE 303

Query: 422 KPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAY 481
             + +A YS+ DA  TY L   ++ P    L+ +I  S  +V R  +G L E  L+ +AY
Sbjct: 304 NLERVARYSMEDAKVTYELGKEFL-PMEAQLSRLIGQSLWDVSRSSTGNLVEWFLLRKAY 362

Query: 482 KANVICPNKHQSDPEKFYRNHLLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQLL 541
           + N + PNK   D ++  R      ++Y GG+V+  E G++ + +   F+  P+      
Sbjct: 363 ERNELAPNK--PDEKELARRR----QSYEGGYVKEPERGLWENIVYLDFRCHPA------ 410

Query: 542 NNLDRDLQYAIKVEGKMDLESVSNYDEV 569
                D +  +K +G +++  V   D V
Sbjct: 411 -----DTKVVVKGKGIINISEVQEGDYV 433



 Score = 40.8 bits (94), Expect = 8.5,   Method: Compositional matrix adjust.
 Identities = 45/188 (23%), Positives = 71/188 (37%), Gaps = 44/188 (23%)

Query: 796  WYSMEMAGVVTYTGAK-IIQNARLLIEKIG-KPLELDTDGIWCVLPGSFPENFTFKTKDL 853
            WY  E A  VT  G + I    + + EK G K +  DTDG +  +PG+  E    K  + 
Sbjct: 1401 WYCKECAESVTAWGREYITMTIKEIEEKYGFKVIYSDTDGFFATIPGADAETVKKKAMEF 1460

Query: 854  KKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEFEVDGPYKAMILPA 913
             K +    P                                  ++E E +G YK      
Sbjct: 1461 LKYINAKLP---------------------------------GALELEYEGFYKRGFF-- 1485

Query: 914  SKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFLHGSTIEECYS 973
                  + KK+YAV +++G +   +G EI RR   ++ K  QA + +  L    +E+   
Sbjct: 1486 ------VTKKKYAVIDEEGKIT-TRGLEIVRRDWSEIAKETQARVLEALLKDGDVEKAVR 1538

Query: 974  AVAAVANR 981
             V  V  +
Sbjct: 1539 IVKEVTEK 1546


>gi|6015025|sp|P56689.1|DPOL_THEGO RecName: Full=DNA polymerase; AltName: Full=TO POL
 gi|4699806|pdb|1TGO|A Chain A, Thermostable B Type Dna Polymerase From Thermococcus
           Gorgonarius
          Length = 773

 Score = 96.3 bits (238), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 96/355 (27%), Positives = 159/355 (44%), Gaps = 56/355 (15%)

Query: 189 CIVDLREYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLLEKRVDLLQRAEVHVCAFDIET 248
            +VD+ EYD+P+  R+ ID  +                    + +    E+ + AFDIET
Sbjct: 105 AVVDIYEYDIPFAKRYLIDKGL--------------------IPMEGDEELKMLAFDIET 144

Query: 249 TKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNVN 308
             L  +  +     I+MISY  D +G  +I  + +     DL Y           V  V+
Sbjct: 145 --LYHEGEEFAEGPILMISYA-DEEGARVITWKNI-----DLPY-----------VDVVS 185

Query: 309 NEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKM-----SEELGFQCDK 363
            E E+++ +   ++E  P + +TYNGD FD+ +L+ R+   G K        E   Q   
Sbjct: 186 TEKEMIKRFLKVVKEKDPDVLITYNGDNFDFAYLKKRSEKLGVKFILGREGSEPKIQRMG 245

Query: 364 NQGECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRF--AKE 421
           ++     K   H D +  ++R   LP  +  L+AV +A  G    +V  E++ +     E
Sbjct: 246 DRFAVEVKGRIHFDLYPVIRRTINLP--TYTLEAVYEAIFGQPKEKVYAEEIAQAWETGE 303

Query: 422 KPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAY 481
             + +A YS+ DA  TY L   +  P    L+ ++  S  +V R  +G L E  L+ +AY
Sbjct: 304 GLERVARYSMEDAKVTYELGKEF-FPMEAQLSRLVGQSLWDVSRSSTGNLVEWFLLRKAY 362

Query: 482 KANVICPNKHQSDPEKFYRNHLLESETYIGGHVECLESGVFRSDLPTSFK-LDPS 535
           + N + PNK         R      E+Y GG+V+  E G++ + +   F+ L PS
Sbjct: 363 ERNELAPNKPDE------RELARRRESYAGGYVKEPERGLWENIVYLDFRSLYPS 411



 Score = 64.3 bits (155), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 78/303 (25%), Positives = 120/303 (39%), Gaps = 62/303 (20%)

Query: 770  LYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNA-RLLIEKIG-KPL 827
            L D  Q A K + NSFYGY     ARWY  E A  VT  G + I+   R + EK G K L
Sbjct: 478  LLDYRQRAIKILANSFYGYYGYAKARWYCKECAESVTAWGRQYIETTIREIEEKFGFKVL 537

Query: 828  ELDTDGIWCVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVS 887
              DTDG +  +PG+  E    K K+    +    P ++                      
Sbjct: 538  YADTDGFFATIPGADAETVKKKAKEFLDYINAKLPGLL---------------------- 575

Query: 888  KTYETHSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGE 947
                       E E +G YK            + KK+YAV +++  +   +G EI RR  
Sbjct: 576  -----------ELEYEGFYKRGFF--------VTKKKYAVIDEEDKIT-TRGLEIVRRDW 615

Query: 948  LKLIKVFQAELFDKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESST 1007
             ++ K  QA + +  L    +EE    V  V  +          ++   +L+ Y      
Sbjct: 616  SEIAKETQARVLEAILKHGDVEEAVRIVKEVTEKL------SKYEVPPEKLVIY----EQ 665

Query: 1008 MSKSLADYGEQKSCAVTTARRLSDFLGDTMVKDKGLRCQYIVACEPQGTP-VSERAVPVA 1066
            +++ L DY +     V  A+RL+      +    G    YIV    +G+  + +RA+P  
Sbjct: 666  ITRDLKDY-KATGPHVAVAKRLA---ARGIKIRPGTVISYIVL---KGSGRIGDRAIPFD 718

Query: 1067 IFE 1069
             F+
Sbjct: 719  EFD 721


>gi|237880813|gb|ACR33068.1| family B DNA polymerase precursor [Thermococcus marinus]
          Length = 1312

 Score = 96.3 bits (238), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 96/355 (27%), Positives = 159/355 (44%), Gaps = 56/355 (15%)

Query: 189 CIVDLREYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLLEKRVDLLQRAEVHVCAFDIET 248
            +VD+ EYD+P+  R+ ID  +                    + +    E+ + AFDIET
Sbjct: 105 AVVDIYEYDIPFAKRYLIDKGL--------------------IPMEGDEELTMLAFDIET 144

Query: 249 TKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNVN 308
             L  +  +     I+MISY  + +  +I  ++       DL Y           V  V+
Sbjct: 145 --LYHEGEEFGTGPILMISYADENEARVITWKKI------DLPY-----------VEVVS 185

Query: 309 NEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMS-----EELGFQCDK 363
            E E+++ +   ++E  P + +TYNGD FD+ +L+ R    G K +      E   Q   
Sbjct: 186 TEKEMIKRFLRVVKEKDPDVLITYNGDNFDFAYLKKRCEKLGIKFTLGRDGSEPKIQRMG 245

Query: 364 NQGECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRF--AKE 421
           ++     K   H D +  ++R   LP  +  L+AV +A  G    +V  E++     + E
Sbjct: 246 DRFAVEVKGRIHFDLYPVIRRTINLP--TYTLEAVYEAVFGKPKEKVYAEEITEAWESGE 303

Query: 422 KPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAY 481
             + +A YS+ DA  TY L   +  P    L+ +I  S  +V R  +G L E  L+ +AY
Sbjct: 304 GLERVARYSMEDAKVTYELGREFF-PMEAQLSRLIGQSLWDVSRSSTGNLVEWFLLRKAY 362

Query: 482 KANVICPNKHQSDPEKFYRNHLLESETYIGGHVECLESGVFRSDLPTSF-KLDPS 535
           + N + PNK   D  +  R      E+Y GG+V+  E G++ + +   F  L PS
Sbjct: 363 ERNELAPNK--PDERELARRR----ESYAGGYVKEPERGLWENIVYLDFMSLYPS 411



 Score = 45.4 bits (106), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 54/201 (26%), Positives = 79/201 (39%), Gaps = 44/201 (21%)

Query: 783  NSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLI-EKIG-KPLELDTDGIWCVLPG 840
            NS+YGY     ARWY  E A  VT  G + I+     I EK G K L  DTDG +  +PG
Sbjct: 1028 NSYYGYYGYAKARWYCRECAESVTAWGREYIETTIHEIEEKFGFKVLYADTDGFFATIPG 1087

Query: 841  SFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEF 900
            +  E    K K+  K +    P ++                                 E 
Sbjct: 1088 ADAETVKKKAKEFLKYINAKLPGLL---------------------------------EL 1114

Query: 901  EVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFD 960
            E +G Y             + KK+YAV +++G +   +G EI RR   ++ K  QA + +
Sbjct: 1115 EYEGFYVRGFF--------VTKKKYAVIDEEGKIT-TRGLEIVRRDWSEIAKETQARVLE 1165

Query: 961  KFLHGSTIEECYSAVAAVANR 981
              L    +E+    V  V  +
Sbjct: 1166 AILKHGDVEKAVRIVKEVTEK 1186


>gi|240103512|ref|YP_002959821.1| DNA-directed DNA polymerase, B family (pol) [Thermococcus
           gammatolerans EJ3]
 gi|239911066|gb|ACS33957.1| DNA-directed DNA polymerase, B family (pol) [Thermococcus
           gammatolerans EJ3]
          Length = 775

 Score = 96.3 bits (238), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 96/355 (27%), Positives = 158/355 (44%), Gaps = 63/355 (17%)

Query: 189 CIVDLREYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLLEKRVDLLQRAEVHVCAFDIET 248
            +VD+ EYD+P+  R+ ID  +                    + +    E+ + AFDIET
Sbjct: 105 AVVDIYEYDIPFAKRYLIDKGL--------------------IPMEGDEELRMLAFDIET 144

Query: 249 TKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNVN 308
             L  +  +     I+MISY  + +  +I  ++       DL Y           V  V+
Sbjct: 145 --LYHEGEEFGTGPILMISYADENEARVITWKKI------DLPY-----------VDVVS 185

Query: 309 NEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMS-----EELGFQCDK 363
            E E+++ +   ++E  P + +TYNGD FD+ +L+ R    G K +      E   Q   
Sbjct: 186 TEKEMIKRFLRVVKEKDPDVLITYNGDNFDFAYLKKRCEKLGIKFTLGRDGSEPKIQRMG 245

Query: 364 NQGECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRF--AKE 421
           ++     K   H D +  ++R   LP  +  L+AV +A  G    +V  E++     + E
Sbjct: 246 DRFAVEVKGRIHFDLYPVIRRTINLP--TYTLEAVYEAVFGKPKEKVYAEEITEAWESGE 303

Query: 422 KPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAY 481
             + +A YS+ DA  TY L   +  P    L+ +I  S  +V R  +G L E  L+ +AY
Sbjct: 304 GLERVARYSMEDAKVTYELGREFF-PMEAQLSRLIGQSLWDVSRSSTGNLVEWFLLRKAY 362

Query: 482 KANVICPNKHQSDPEKFYRNHLLESETYIGGHVECLESGV--------FRSDLPT 528
           + N + PNK    P++  R      E+Y GG+V+  E G+        FRS  P+
Sbjct: 363 ERNELAPNK----PDE--RELARRRESYAGGYVKEPERGLWDNIVYLDFRSLYPS 411



 Score = 66.6 bits (161), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 61/214 (28%), Positives = 86/214 (40%), Gaps = 44/214 (20%)

Query: 770 LYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNA-RLLIEKIG-KPL 827
           L D  Q A K + NSFYGY     ARWY  E A  VT  G + I+   R + EK G K L
Sbjct: 478 LLDYRQRAIKILANSFYGYYGYAKARWYCKECAESVTAWGREYIETTIREIEEKFGFKVL 537

Query: 828 ELDTDGIWCVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVS 887
             DTDG +  +PG+  E    K K+  K +    P ++                      
Sbjct: 538 YADTDGFFATIPGADAETVKKKAKEFLKYINAKLPGLL---------------------- 575

Query: 888 KTYETHSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGE 947
                      E E +G Y             + KK+YAV +++G +   +G EI RR  
Sbjct: 576 -----------ELEYEGFYVRGFF--------VTKKKYAVIDEEGKIT-TRGLEIVRRDW 615

Query: 948 LKLIKVFQAELFDKFLHGSTIEECYSAVAAVANR 981
            ++ K  QA + +  L    +EE    V  V  +
Sbjct: 616 SEIAKETQARVLEAILKHGDVEEAVRIVKEVTEK 649


>gi|14591688|ref|NP_143776.1| DNA-directed DNA polymerase [Pyrococcus horikoshii OT3]
 gi|3913526|sp|O59610.1|DPOL_PYRHO RecName: Full=DNA polymerase; Contains: RecName: Full=Pho pol
           intein; AltName: Full=Pho Pol I intein
 gi|3258391|dbj|BAA31074.1| 1235aa long hypothetical DNA-directed DNA polymerase [Pyrococcus
           horikoshii OT3]
          Length = 1235

 Score = 96.3 bits (238), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 99/355 (27%), Positives = 158/355 (44%), Gaps = 55/355 (15%)

Query: 189 CIVDLREYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLLEKRVDLLQRAEVHVCAFDIET 248
            +VD+ EYD+P+  R+ ID  +                      +    ++   A DIET
Sbjct: 105 AVVDIFEYDIPFAKRYLIDKGL--------------------TPMEGNEKLTFLAVDIET 144

Query: 249 TKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNVN 308
             L  +  +     ++MISY  D +G  +I  + +     DL Y           V  V+
Sbjct: 145 --LYHEGEEFGKGPVIMISYA-DEEGAKVITWKKI-----DLPY-----------VEVVS 185

Query: 309 NEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKM-----SEELGFQCDK 363
           +E E+++     ++E  P + +TYNGD FD+P+L  RA   G K+     + E   Q   
Sbjct: 186 SEREMIKRLIRVIKEKDPDVIITYNGDNFDFPYLLKRAEKLGIKLLLGRDNSEPKMQKMG 245

Query: 364 NQGECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRF--AKE 421
           +      K   H D F  ++R   LP  +  L+AV +A  G    +V  +++ +     E
Sbjct: 246 DSLAVEIKGRIHFDLFPVIRRTINLP--TYTLEAVYEAIFGKPKEKVYADEIAKAWETGE 303

Query: 422 KPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAY 481
             + +A YS+ DA  TY L   +  P    LA ++     +V R  +G L E  L+ +AY
Sbjct: 304 GLERVAKYSMEDAKVTYELGREF-FPMEAQLARLVGQPVWDVSRSSTGNLVEWFLLRKAY 362

Query: 482 KANVICPNKHQSDPEKFYRNHLLESETYIGGHVECLESGVFRSDLPTSFK-LDPS 535
           + N + PNK     EK Y   L ES  Y GG+V+  E G++   +   F+ L PS
Sbjct: 363 ERNELAPNKPD---EKEYERRLRES--YEGGYVKEPEKGLWEGIVSLDFRSLYPS 412



 Score = 43.9 bits (102), Expect = 0.88,   Method: Compositional matrix adjust.
 Identities = 74/312 (23%), Positives = 130/312 (41%), Gaps = 63/312 (20%)

Query: 759  IKIQEAQDMVVLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARL 818
            + +++ ++ +V +  L  AH    NS+YGY     ARWY  E A  VT  G + I   R 
Sbjct: 933  LSVEDNENFLVGF-GLLYAH----NSYYGYYGYAKARWYCKECAESVTAWGRQYIDLVRR 987

Query: 819  LIEKIG-KPLELDTDGIWCVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTND 877
             +E  G K L +DTDG++  +PG          KD +              +V R     
Sbjct: 988  ELEARGFKVLYIDTDGLYATIPG---------VKDWE--------------EVKRRALE- 1023

Query: 878  QYQTLVDPVSKTYETHSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAEL 937
                 VD ++    +     +E E +G Y             + KK+YA+ +++G +   
Sbjct: 1024 ----FVDYIN----SKLPGVLELEYEGFYARGFF--------VTKKKYALIDEEGKIV-T 1066

Query: 938  KGFEIKRRGELKLIKVFQAELFDKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSE 997
            +G EI RR   ++ K  QA + +  L    +EE    V  V  +  +       ++   +
Sbjct: 1067 RGLEIVRRDWSEIAKETQARVLEAILKHGNVEEAVKIVKDVTEKLTNY------EVPPEK 1120

Query: 998  LIDYISESSTMSKSLADYGEQKSCAVTTARRLSDFLGDTMVKDKGLRCQYIVACEPQGTP 1057
            L+ Y      +++ + +Y +     V  A+RL   +   +    G+   YIV       P
Sbjct: 1121 LVIY----EQITRPINEY-KAIGPHVAVAKRL---MARGIKVKPGMVIGYIVLR--GDGP 1170

Query: 1058 VSERAVPVAIFE 1069
            +S+RA+ +  F+
Sbjct: 1171 ISKRAISIEEFD 1182


>gi|301087457|gb|ADK60920.1| DNA polymerase [Thermococcus celer]
          Length = 774

 Score = 95.9 bits (237), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 97/355 (27%), Positives = 156/355 (43%), Gaps = 56/355 (15%)

Query: 189 CIVDLREYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLLEKRVDLLQRAEVHVCAFDIET 248
            +VD+ EYD+P+  R+ ID  +                    V +    E+ + AFDIET
Sbjct: 105 AVVDIYEYDIPFAKRYLIDKGL--------------------VPMEGEEELKLMAFDIET 144

Query: 249 TKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNVN 308
             L  +  +     I+MISY  DG G  +I  + +     DL Y           V  V+
Sbjct: 145 --LYHEGDEFGEGPILMISYA-DGDGARVITWKKI-----DLPY-----------VDVVS 185

Query: 309 NEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKM-----SEELGFQCDK 363
            E E+++ +   ++E  P + VTYNGD FD+ +L+ R+   G K        E   Q   
Sbjct: 186 TEKEMIKRFLQVVKEKDPDVLVTYNGDNFDFAYLKRRSEELGLKFILGRDGSEPKIQRMG 245

Query: 364 NQGECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRF--AKE 421
           ++     K   H D +  ++R   LP  +  L+AV +A  G    +V   ++V      E
Sbjct: 246 DRFAVEVKGRIHFDLYPVIRRTVNLP--TYTLEAVYEAIFGRPKEKVYAGEIVEAWETGE 303

Query: 422 KPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAY 481
             + +A YS+ DA  T+ L   +  P    L+ +I     +V R  +G L E  L+ +AY
Sbjct: 304 GLERVARYSMEDAKVTFELGREFF-PMEAQLSRLIGQGLWDVSRSSTGNLVEWFLLRKAY 362

Query: 482 KANVICPNKHQSDPEKFYRNHLLESETYIGGHVECLESGVFRSDLPTSFK-LDPS 535
           + N + PNK         R   +    Y GG+V+  E G++ + +   F+ L PS
Sbjct: 363 ERNELAPNKPSG------REVEIRRRGYAGGYVKEPERGLWENIVYLDFRSLYPS 411



 Score = 58.5 bits (140), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 78/303 (25%), Positives = 120/303 (39%), Gaps = 62/303 (20%)

Query: 770  LYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNA-RLLIEKIG-KPL 827
            L D  Q A K + NSFYGY     ARWY  E A  VT  G + I    R L EK G K L
Sbjct: 478  LLDYRQRAIKILANSFYGYYGYARARWYCRECAESVTAWGREYIDRVIRELEEKFGFKVL 537

Query: 828  ELDTDGIWCVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVS 887
              DTDG+   +PG+       + +   + +    P ++                      
Sbjct: 538  YADTDGLHATIPGADAGTVKERARGFLRYINPKLPGLL---------------------- 575

Query: 888  KTYETHSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGE 947
                       E E +G Y             + KK+YAV +++G +   +G EI RR  
Sbjct: 576  -----------ELEYEGFYLRGFF--------VTKKKYAVIDEEGKIT-TRGLEIVRRDW 615

Query: 948  LKLIKVFQAELFDKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESST 1007
             ++ K  QA + +  L    +EE    V  V  +          ++   +L+  I E   
Sbjct: 616  SEVAKETQARVLEAILRHGDVEEAVRIVREVTEKLSKY------EVPPEKLV--IHEQ-- 665

Query: 1008 MSKSLADYGEQKSCAVTTARRLSDFLGDTMVKDKGLRCQYIVACEPQGTP-VSERAVPVA 1066
            +++ L DY +     V  A+RL+   G  +    G    YIV    +G+  + +RA+P  
Sbjct: 666  ITRDLRDY-KATGPHVAVAKRLA---GRGVRIRPGTVISYIVL---KGSGRIGDRAIPFD 718

Query: 1067 IFE 1069
             F+
Sbjct: 719  EFD 721


>gi|337285020|ref|YP_004624494.1| family B-type DNA-dependent polymerase [Pyrococcus yayanosii CH1]
 gi|334900954|gb|AEH25222.1| family B-type DNA-dependent polymerase precursor [Pyrococcus
           yayanosii CH1]
          Length = 1313

 Score = 95.9 bits (237), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 96/355 (27%), Positives = 158/355 (44%), Gaps = 55/355 (15%)

Query: 189 CIVDLREYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLLEKRVDLLQRAEVHVCAFDIET 248
            ++D+ EYD+P+  R+ ID  +                    + +    E+ + AFDIET
Sbjct: 105 AVIDIFEYDIPFAKRYLIDKGL--------------------IPMEGNEELKLLAFDIET 144

Query: 249 TKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNVN 308
             L  +  +     I+MISY  D +G  +I  + V     DL Y           V  V+
Sbjct: 145 --LYHEGDEFGSGPIIMISYA-DEKGAKVITWKGV-----DLPY-----------VEVVS 185

Query: 309 NEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKM-----SEELGFQCDK 363
           +E E+++ +   ++E  P + +TYNGD FD+P+L  RA   G K+       E   Q   
Sbjct: 186 SEREMIKRFLRVIREKDPDVIITYNGDNFDFPYLLKRAEKLGMKLPIGRDGSEPKMQRMG 245

Query: 364 NQGECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAK--E 421
           +      K   H D +  ++R   LP  +  L+AV +A  G    +V P ++ R  +  +
Sbjct: 246 DGFAVEVKGRIHFDIYPVIRRTINLP--TYTLEAVYEAVFGRPKEKVYPNEIARAWENCK 303

Query: 422 KPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAY 481
             + +A YS+ DA  TY L   +  P    LA ++     +V R  +G L E  L+ +AY
Sbjct: 304 GLERVAKYSMEDAKVTYELGREF-FPMEAQLARLVGQPVWDVSRSSTGNLVEWFLLRKAY 362

Query: 482 KANVICPNKHQSDPEKFYRNHLLESETYIGGHVECLESGVFRSDLPTSFK-LDPS 535
           + N + PN+                E+Y GG+V+  E G++   +   F+ L PS
Sbjct: 363 ERNELAPNRPDER-----EYERRLRESYEGGYVKEPEKGLWEGIIYLDFRSLYPS 412



 Score = 46.6 bits (109), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 69/289 (23%), Positives = 115/289 (39%), Gaps = 60/289 (20%)

Query: 783  NSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIG-KPLELDTDGIWCVLPGS 841
            NS+YGY     ARWY  E A  VT  G + I+     +EK G K L +DTDG++  +PGS
Sbjct: 1029 NSYYGYYGYAKARWYCKECAESVTAWGREYIELVSRELEKRGFKVLYIDTDGLYATIPGS 1088

Query: 842  FP-ENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEF 900
               +    +  +  K +    P ++                                 E 
Sbjct: 1089 REWDKIKERALEFVKYINARLPGLL---------------------------------EL 1115

Query: 901  EVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFD 960
            E +G YK            + KK+YA+ +++G +   +G EI RR   ++ K  QA + +
Sbjct: 1116 EYEGFYKRGFF--------VTKKKYALIDEEGKII-TRGLEIVRRDWSEIAKETQARVLE 1166

Query: 961  KFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLADYGEQKS 1020
              L    +E+    V  V  +          ++   +L+ Y      +++ L DY +   
Sbjct: 1167 AILKEGNLEKAVKIVKEVTEKL------SKYEVPPEKLVIY----EQITRDLKDY-KAVG 1215

Query: 1021 CAVTTARRLSDFLGDTMVKDKGLRCQYIVACEPQGTPVSERAVPVAIFE 1069
              V  A+RL+      +    G+   Y+V       P+S RA+P   F+
Sbjct: 1216 PHVAVAKRLA---ARGIKVRPGMVIGYLVLR--GDGPISRRAIPAEEFD 1259


>gi|237506873|gb|ACQ99189.1| family B DNA polymerase [Thermococcus guaymasensis]
          Length = 775

 Score = 95.9 bits (237), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 94/341 (27%), Positives = 153/341 (44%), Gaps = 55/341 (16%)

Query: 189 CIVDLREYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLLEKRVDLLQRAEVHVCAFDIET 248
            +VD+ EYD+P+  R+ ID  +                    + +    E+ + AFDIET
Sbjct: 105 AVVDIYEYDIPFAKRYLIDKGL--------------------IPMEGDEELTMLAFDIET 144

Query: 249 TKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNVN 308
             L  +  +     I+MISY  DG    +I  + +     DL Y           V  V+
Sbjct: 145 --LYHEGEEFGTGPILMISYA-DGSEARVITWKKI-----DLPY-----------VDVVS 185

Query: 309 NEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMS-----EELGFQCDK 363
            E E+++ +   ++E  P + +TYNGD FD+ +L+ R    G K +      E   Q   
Sbjct: 186 TEKEMIKRFLRVVKEKDPDVLITYNGDNFDFAYLKKRCEKLGIKFTLGRDGSEPKIQRMG 245

Query: 364 NQGECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRF--AKE 421
           ++     K   H D +  ++R   LP  +  L+AV +A  G    +V  E++     + E
Sbjct: 246 DRFAVEVKGRIHFDLYPVIRRTINLP--TYTLEAVYEAVFGKPKEKVYAEEITEAWESGE 303

Query: 422 KPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAY 481
             + +A YS+ DA  TY L   +  P    L+ +I  S  +V R  +G L E  L+ +AY
Sbjct: 304 GLERVARYSMEDAKVTYELGREFF-PMEAQLSRLIGQSLWDVSRSSTGNLVEWFLLRKAY 362

Query: 482 KANVICPNKHQSDPEKFYRNHLLESETYIGGHVECLESGVF 522
           + N + PNK   D  +  R      E+Y GG+V+  E G++
Sbjct: 363 ERNELAPNK--PDERELARRR----ESYAGGYVKEPERGLW 397



 Score = 52.8 bits (125), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 58/214 (27%), Positives = 86/214 (40%), Gaps = 44/214 (20%)

Query: 770 LYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNA-RLLIEKIG-KPL 827
           + D  Q A K + NS+YGY     ARWY  E A  VT  G + I+   R + EK G K L
Sbjct: 478 ILDYRQRAIKILANSYYGYYGYAKARWYCRECAESVTAWGREYIETTIREIEEKFGFKVL 537

Query: 828 ELDTDGIWCVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVS 887
             DTDG +  +PG+  E    K ++  K +    P ++                      
Sbjct: 538 YADTDGFFATIPGANAETVKKKAREFLKYINAKLPGLL---------------------- 575

Query: 888 KTYETHSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGE 947
                      E E +G Y             + KK+YA+ +++G +   +G EI RR  
Sbjct: 576 -----------ELEYEGFYLRGFF--------VTKKKYALIDEEGKIT-TRGLEIVRRDW 615

Query: 948 LKLIKVFQAELFDKFLHGSTIEECYSAVAAVANR 981
            ++ K  QA + +  L    IEE    V  V  +
Sbjct: 616 SEIAKETQARVLEAILKHGDIEEAVRIVKEVTEK 649


>gi|194368604|pdb|2VWK|A Chain A, Uracil Recognition In Archaeal Dna Polymerases Captured By
           X-Ray Crystallography. V93q Polymerase Variant
          Length = 773

 Score = 94.4 bits (233), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 96/356 (26%), Positives = 157/356 (44%), Gaps = 58/356 (16%)

Query: 189 CIVDLREYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLLEKRVDLLQRAEVHVCAFDIET 248
            +VD+ EYD+P+  R+ ID  +                    + +    E+ + AFDIET
Sbjct: 105 AVVDIYEYDIPFAKRYLIDKGL--------------------IPMEGDEELKMLAFDIET 144

Query: 249 T-KLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNV 307
                 KF +     I+MISY  D +G  +I    +     DL Y           V  V
Sbjct: 145 LYHEGEKFAEGP---ILMISYA-DEEGARVITWRNI-----DLPY-----------VDVV 184

Query: 308 NNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKM-----SEELGFQCD 362
           + E E+++ +   ++E  P + +TYNGD F + +L+ R+   G K        E   Q  
Sbjct: 185 STEKEMIKRFLKVVKEKDPDVLITYNGDNFAFAYLKKRSEKLGVKFILGREGSEPKIQRM 244

Query: 363 KNQGECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRF--AK 420
            ++     K   H D +  ++R   LP  +  L+AV +A  G    +V  E++ +     
Sbjct: 245 GDRFAVEVKGRIHFDLYPVIRRTINLP--TYTLEAVYEAIFGQPKEKVYAEEIAQAWETG 302

Query: 421 EKPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQA 480
           E  + +A YS+ DA  TY L   +  P    L+ ++  S  +V R  +G L E  L+ +A
Sbjct: 303 EGLERVARYSMEDAKVTYELGKEFF-PMEAQLSRLVGQSLWDVSRSSTGNLVEWFLLRKA 361

Query: 481 YKANVICPNKHQSDPEKFYRNHLLESETYIGGHVECLESGVFRSDLPTSFK-LDPS 535
           Y+ N + PNK         R      E+Y GG+V+  E G++ + +   F+ L PS
Sbjct: 362 YERNELAPNKPDE------RELARRRESYAGGYVKEPERGLWENIVYLDFRSLYPS 411



 Score = 64.7 bits (156), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 78/303 (25%), Positives = 120/303 (39%), Gaps = 62/303 (20%)

Query: 770  LYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNA-RLLIEKIG-KPL 827
            L D  Q A K + NSFYGY     ARWY  E A  VT  G + I+   R + EK G K L
Sbjct: 478  LLDYRQRAIKILANSFYGYYGYAKARWYCKECAESVTAWGRQYIETTIREIEEKFGFKVL 537

Query: 828  ELDTDGIWCVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVS 887
              DTDG +  +PG+  E    K K+    +    P ++                      
Sbjct: 538  YADTDGFFATIPGADAETVKKKAKEFLDYINAKLPGLL---------------------- 575

Query: 888  KTYETHSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGE 947
                       E E +G YK            + KK+YAV +++  +   +G EI RR  
Sbjct: 576  -----------ELEYEGFYKRGFF--------VTKKKYAVIDEEDKIT-TRGLEIVRRDW 615

Query: 948  LKLIKVFQAELFDKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESST 1007
             ++ K  QA + +  L    +EE    V  V  +          ++   +L+ Y      
Sbjct: 616  SEIAKETQARVLEAILKHGDVEEAVRIVKEVTEKLSKY------EVPPEKLVIY----EQ 665

Query: 1008 MSKSLADYGEQKSCAVTTARRLSDFLGDTMVKDKGLRCQYIVACEPQGTP-VSERAVPVA 1066
            +++ L DY +     V  A+RL+      +    G    YIV    +G+  + +RA+P  
Sbjct: 666  ITRDLKDY-KATGPHVAVAKRLA---ARGIKIRPGTVISYIVL---KGSGRIGDRAIPFD 718

Query: 1067 IFE 1069
             F+
Sbjct: 719  EFD 721


>gi|194368602|pdb|2VWJ|A Chain A, Uracil Recognition In Archaeal Dna Polymerases Captured By
           X-Ray Crystallography
          Length = 773

 Score = 94.0 bits (232), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 96/356 (26%), Positives = 157/356 (44%), Gaps = 58/356 (16%)

Query: 189 CIVDLREYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLLEKRVDLLQRAEVHVCAFDIET 248
            +VD+ EYD+P+  R+ ID  +                    + +    E+ + AFDIET
Sbjct: 105 AVVDIYEYDIPFAKRYLIDKGL--------------------IPMEGDEELKMLAFDIET 144

Query: 249 T-KLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNV 307
                 KF +     I+MISY  D +G  +I    +     DL Y           V  V
Sbjct: 145 LYHEGEKFAEGP---ILMISYA-DEEGARVITWRNI-----DLPY-----------VDVV 184

Query: 308 NNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKM-----SEELGFQCD 362
           + E E+++ +   ++E  P + +TYNGD F + +L+ R+   G K        E   Q  
Sbjct: 185 STEKEMIKRFLKVVKEKDPDVLITYNGDNFAFAYLKKRSEKLGVKFILGREGSEPKIQRM 244

Query: 363 KNQGECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRF--AK 420
            ++     K   H D +  ++R   LP  +  L+AV +A  G    +V  E++ +     
Sbjct: 245 GDRFAVEVKGRIHFDLYPVIRRTINLP--TYTLEAVYEAIFGQPKEKVYAEEIAQAWETG 302

Query: 421 EKPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQA 480
           E  + +A YS+ DA  TY L   +  P    L+ ++  S  +V R  +G L E  L+ +A
Sbjct: 303 EGLERVARYSMEDAKVTYELGKEF-FPMEAQLSRLVGQSLWDVSRSSTGNLVEWFLLRKA 361

Query: 481 YKANVICPNKHQSDPEKFYRNHLLESETYIGGHVECLESGVFRSDLPTSFK-LDPS 535
           Y+ N + PNK         R      E+Y GG+V+  E G++ + +   F+ L PS
Sbjct: 362 YERNELAPNKPDE------RELARRRESYAGGYVKEPERGLWENIVYLDFRSLYPS 411



 Score = 64.3 bits (155), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 69/263 (26%), Positives = 104/263 (39%), Gaps = 55/263 (20%)

Query: 770  LYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNA-RLLIEKIG-KPL 827
            L D  Q A K + NSFYGY     ARWY  E A  VT  G + I+   R + EK G K L
Sbjct: 478  LLDYRQRAIKILANSFYGYYGYAKARWYCKECAESVTAWGRQYIETTIREIEEKFGFKVL 537

Query: 828  ELDTDGIWCVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVS 887
              DTDG +  +PG+  E    K K+    +    P ++                      
Sbjct: 538  YADTDGFFATIPGADAETVKKKAKEFLDYINAKLPGLL---------------------- 575

Query: 888  KTYETHSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGE 947
                       E E +G YK            + KK+YAV +++  +   +G EI RR  
Sbjct: 576  -----------ELEYEGFYKRGFF--------VTKKKYAVIDEEDKIT-TRGLEIVRRDW 615

Query: 948  LKLIKVFQAELFDKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESST 1007
             ++ K  QA + +  L    +EE    V  V  +          ++   +L+ Y      
Sbjct: 616  SEIAKETQARVLEAILKHGDVEEAVRIVKEVTEKL------SKYEVPPEKLVIY----EQ 665

Query: 1008 MSKSLADYGEQKSCAVTTARRLS 1030
            +++ L DY +     V  A+RL+
Sbjct: 666  ITRDLKDY-KATGPHVAVAKRLA 687


>gi|3913540|sp|Q56366.1|DPOL_THES9 RecName: Full=DNA polymerase
 gi|1197452|gb|AAA88769.1| DNA polymerase [Thermococcus sp. 9oN-7]
          Length = 775

 Score = 94.0 bits (232), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 98/355 (27%), Positives = 160/355 (45%), Gaps = 56/355 (15%)

Query: 189 CIVDLREYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLLEKRVDLLQRAEVHVCAFDIET 248
            +VD+ EYD+P+  R+ ID  +                    + +    E+ + AFDIET
Sbjct: 105 AVVDIYEYDIPFAKRYLIDKGL--------------------IPMEGDEELTMLAFDIET 144

Query: 249 TKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNVN 308
             L  +  +     I+MISY  DG    +I  + +     DL Y           V  V+
Sbjct: 145 --LYHEGEEFGTGPILMISYA-DGSEARVITWKKI-----DLPY-----------VDVVS 185

Query: 309 NEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMS-----EELGFQCDK 363
            E E+++ +   ++E  P + +TYNGD FD+ +L+ R    G K +      E   Q   
Sbjct: 186 TEKEMIKRFLRVVREKDPDVLITYNGDNFDFAYLKKRCEELGIKFTLGRDGSEPKIQRMG 245

Query: 364 NQGECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRF--AKE 421
           ++     K   H D +  ++R   LP  +  L+AV +A  G    +V  E++ +   + E
Sbjct: 246 DRFAVEVKGRIHFDLYPVIRRTINLP--TYTLEAVYEAVFGKPKEKVYAEEIAQAWESGE 303

Query: 422 KPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAY 481
             + +A YS+ DA  TY L   +  P    L+ +I  S  +V R  +G L E  L+ +AY
Sbjct: 304 GLERVARYSMEDAKVTYELGREFF-PMEAQLSRLIGQSLWDVSRSSTGNLVEWFLLRKAY 362

Query: 482 KANVICPNKHQSDPEKFYRNHLLESETYIGGHVECLESGVFRSDLPTSFK-LDPS 535
           K N + PNK    P++  R        Y GG+V+  E G++ + +   F+ L PS
Sbjct: 363 KRNELAPNK----PDE--RELARRRGGYAGGYVKEPERGLWDNIVYLDFRSLYPS 411



 Score = 65.1 bits (157), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 62/214 (28%), Positives = 86/214 (40%), Gaps = 44/214 (20%)

Query: 770 LYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNA-RLLIEKIG-KPL 827
           L D  Q A K + NSFYGY     ARWY  E A  VT  G + I+   R L EK G K L
Sbjct: 478 LLDYRQRAIKILANSFYGYYGYAKARWYCKECAESVTAWGREYIEMVIRELEEKFGFKVL 537

Query: 828 ELDTDGIWCVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVS 887
             DTDG+   +PG+  E    K K+  K +    P ++                      
Sbjct: 538 YADTDGLHATIPGADAETVKKKAKEFLKYINPKLPGLL---------------------- 575

Query: 888 KTYETHSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGE 947
                      E E +G Y             + KK+YAV +++G +   +G EI RR  
Sbjct: 576 -----------ELEYEGFYVRGFF--------VTKKKYAVIDEEGKIT-TRGLEIVRRDW 615

Query: 948 LKLIKVFQAELFDKFLHGSTIEECYSAVAAVANR 981
            ++ K  QA + +  L    +EE    V  V  +
Sbjct: 616 SEIAKETQARVLEAILKHGDVEEAVRIVKEVTEK 649


>gi|52696275|pdb|1WNS|A Chain A, Crystal Structure Of Family B Dna Polymerase From
           Hyperthermophilic Archaeon Pyrococcus Kodakaraensis Kod1
          Length = 774

 Score = 94.0 bits (232), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 97/355 (27%), Positives = 161/355 (45%), Gaps = 56/355 (15%)

Query: 189 CIVDLREYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLLEKRVDLLQRAEVHVCAFDIET 248
            ++D+ EYD+P+  R+ ID  +                    V +    E+ + AFDIET
Sbjct: 105 AVIDIYEYDIPFAKRYLIDKGL--------------------VPMEGDEELKMLAFDIET 144

Query: 249 TKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNVN 308
             L  +  +     I+MISY  D +G  +I  + V     DL Y           V  V+
Sbjct: 145 --LYHEGEEFAEGPILMISYA-DEEGARVITWKNV-----DLPY-----------VDVVS 185

Query: 309 NEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMS-----EELGFQCDK 363
            E E+++ +   ++E  P + +TYNGD FD+ +L+ R    G   +      E   Q   
Sbjct: 186 TEREMIKRFLRVVKEKDPDVLITYNGDNFDFAYLKKRCEKLGINFALGRDGSEPKIQRMG 245

Query: 364 NQGECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRF--AKE 421
           ++     K   H D +  ++R   LP  +  L+AV +A  G    +V  E++       E
Sbjct: 246 DRFAVEVKGRIHFDLYPVIRRTINLP--TYTLEAVYEAVFGQPKEKVYAEEITTAWETGE 303

Query: 422 KPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAY 481
             + +A YS+ DA  TY L   ++ P    L+ +I  S  +V R  +G L E  L+ +AY
Sbjct: 304 NLERVARYSMEDAKVTYELGKEFL-PMEAQLSRLIGQSLWDVSRSSTGNLVEWFLLRKAY 362

Query: 482 KANVICPNKHQSDPEKFYRNHLLESETYIGGHVECLESGVFRSDLPTSFK-LDPS 535
           + N + PNK   D ++  R      ++Y GG+V+  E G++ + +   F+ L PS
Sbjct: 363 ERNELAPNK--PDEKELARRR----QSYEGGYVKEPERGLWENIVYLDFRSLYPS 411



 Score = 45.4 bits (106), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 57/214 (26%), Positives = 85/214 (39%), Gaps = 44/214 (20%)

Query: 770 LYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAK-IIQNARLLIEKIG-KPL 827
           L D  Q A K + NS+YGY     ARWY  E A  VT  G + I    + + EK G K +
Sbjct: 478 LLDYRQRAIKILANSYYGYYGYARARWYCKECAESVTAWGREYITMTIKEIEEKYGFKVI 537

Query: 828 ELDTDGIWCVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVS 887
             DTDG +  +PG+  E    K  +  K +    P                         
Sbjct: 538 YSDTDGFFATIPGADAETVKKKAMEFLKYINAKLP------------------------- 572

Query: 888 KTYETHSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGE 947
                    ++E E +G YK            + KK+YAV +++G +   +G EI RR  
Sbjct: 573 --------GALELEYEGFYKRGFF--------VTKKKYAVIDEEGKIT-TRGLEIVRRDW 615

Query: 948 LKLIKVFQAELFDKFLHGSTIEECYSAVAAVANR 981
            ++ K  QA + +  L    +E+    V  V  +
Sbjct: 616 SEIAKETQARVLEALLKDGDVEKAVRIVKEVTEK 649


>gi|374635872|ref|ZP_09707461.1| DNA polymerase Pol2 [Methanotorris formicicus Mc-S-70]
 gi|373560834|gb|EHP87084.1| DNA polymerase Pol2 [Methanotorris formicicus Mc-S-70]
          Length = 951

 Score = 94.0 bits (232), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 113/464 (24%), Positives = 198/464 (42%), Gaps = 91/464 (19%)

Query: 84  FRPYFYAATKEKMEMDVEAYLRRRYESQ-IADIEILEKEDLDLKNHLSGLHKSYLKISFD 142
           F+PYFY          +E +L++   S  +  IE+++K                      
Sbjct: 46  FKPYFYVELNNNNIEKIEEFLKKNNLSHYVESIEVVKK---------------------- 83

Query: 143 TVQQLMDVKKDLLHVVERNQAKFDAAEAYESILTGKREQRPQDFLDCIVDLREYDVPYHI 202
              Q+++ +K++L ++ ++         Y   L   +E       D ++D+ E+D+P+  
Sbjct: 84  ---QIINKEKEVLKIITKHPK-------YVPKLRILKE------FDEVLDIYEHDIPFAK 127

Query: 203 RFAIDNDVRCGQWYDV---SISSTGPLLEKRVDLLQRAEVHVCAFDIETTKLPLKFPDAD 259
           R+ IDN +    ++D     I S G             ++   AFD+E      + P++ 
Sbjct: 128 RYLIDNKIIPMTYWDFEKNKIKSRGI-----------PKLKAIAFDMEVYNRNSE-PNSQ 175

Query: 260 YDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNVNNEIELLRLWFA 319
            D I+M S+             C  +  + + Y P      + +V  V +E EL++    
Sbjct: 176 KDPILMASF-------------CAEDFKKVITYKP----FNHERVEVVEDEKELIK---- 214

Query: 320 HMQEVKPG--IYVTYNGDYFDWPFLETRAAHHGFKMS-----EELGFQCDKNQGECRAKF 372
            + EV  G  I  TYNGD FD+P+L+ RA  +G K++     EE+               
Sbjct: 215 RIIEVLKGYDIIYTYNGDNFDFPYLKKRAEIYGIKLNLGRDGEEIKISRGGMHLRSYIPG 274

Query: 373 ACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQMMASYSVS 432
             H+D +   +R  +L +    L+ VT    G   LEV  +++ +  +E  + +  YS  
Sbjct: 275 RVHIDLYPIARRLLHLTK--YKLEDVTLELFGIKKLEVGHQNISKLWEENDEKLIEYSFQ 332

Query: 433 DAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVICPNKHQ 492
           DA+ T+ +   Y  P     + I+  +  E+ R  S  + E LL+  A+K N+I PNK  
Sbjct: 333 DALYTFKI-GEYFLPLEVMFSRIVNQTLFEISRMSSSQMVEYLLLKNAFKNNIIAPNKPS 391

Query: 493 SDPEKFYRNHLLESETYIGGHVECLESGVFRSDLPTSFK-LDPS 535
           ++    Y+  L ES  Y GG+V+    G+    +   FK L PS
Sbjct: 392 NEE---YQRRLKES--YEGGYVKEPIKGMHEGIISYDFKALYPS 430



 Score = 48.1 bits (113), Expect = 0.051,   Method: Compositional matrix adjust.
 Identities = 27/55 (49%), Positives = 31/55 (56%)

Query: 770 LYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIG 824
           L+D  Q + K + NS YGY+    ARWYS E A VVTY G K IQ      EK G
Sbjct: 500 LFDYEQKSLKILANSHYGYLAFPRARWYSKECAEVVTYLGRKYIQETIKEAEKFG 554


>gi|73535447|pdb|1WN7|A Chain A, Crystal Structure Of Archaeal Family B Dna Polymerase
           Mutant
          Length = 774

 Score = 93.6 bits (231), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 97/355 (27%), Positives = 161/355 (45%), Gaps = 56/355 (15%)

Query: 189 CIVDLREYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLLEKRVDLLQRAEVHVCAFDIET 248
            ++D+ EYD+P+  R+ ID  +                    V +    E+ + AFDIET
Sbjct: 105 AVIDIYEYDIPFAKRYLIDKGL--------------------VPMEGDEELKMLAFDIET 144

Query: 249 TKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNVN 308
             L  +  +     I+MISY  D +G  +I  + V     DL Y           V  V+
Sbjct: 145 --LYEEGEEFAEGPILMISYA-DEEGARVITWKNV-----DLPY-----------VDVVS 185

Query: 309 NEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMS-----EELGFQCDK 363
            E E+++ +   ++E  P + +TYNGD FD+ +L+ R    G   +      E   Q   
Sbjct: 186 TEREMIKRFLRVVKEKDPDVLITYNGDNFDFAYLKKRCEKLGINFALGRDGSEPKIQRMG 245

Query: 364 NQGECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRF--AKE 421
           ++     K   H D +  ++R   LP  +  L+AV +A  G    +V  E++       E
Sbjct: 246 DRFAVEVKGRIHFDLYPVIRRTINLP--TYTLEAVYEAVFGQPKEKVYAEEITTAWETGE 303

Query: 422 KPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAY 481
             + +A YS+ DA  TY L   ++ P    L+ +I  S  +V R  +G L E  L+ +AY
Sbjct: 304 NLERVARYSMEDAKVTYELGKEFL-PMEAQLSRLIGQSLWDVSRSSTGNLVEWFLLRKAY 362

Query: 482 KANVICPNKHQSDPEKFYRNHLLESETYIGGHVECLESGVFRSDLPTSFK-LDPS 535
           + N + PNK   D ++  R      ++Y GG+V+  E G++ + +   F+ L PS
Sbjct: 363 ERNELAPNK--PDEKELARRR----QSYEGGYVKEPERGLWENIVYLDFRSLYPS 411



 Score = 45.1 bits (105), Expect = 0.40,   Method: Compositional matrix adjust.
 Identities = 58/215 (26%), Positives = 86/215 (40%), Gaps = 46/215 (21%)

Query: 770 LYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAK-IIQNARLLIEKIG-KPL 827
           L D  Q A K + NS+YGY     ARWY  E A  VT  G + I    + + EK G K +
Sbjct: 478 LLDYRQRAIKILANSYYGYYGYARARWYCKECAESVTAWGREYITMTIKEIEEKYGFKVI 537

Query: 828 ELDTDGIWCVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVS 887
             DTDG +  +PG+  E    K  +  K +    P                         
Sbjct: 538 YSDTDGFFATIPGADAETVKKKAMEFLKYINAKLP------------------------- 572

Query: 888 KTYETHSECSIEFEVDGPYKAMILPASKEEGILI-KKRYAVFNDDGTLAELKGFEIKRRG 946
                    ++E E +G Y         E G  + KK+YAV +++G +   +G EI RR 
Sbjct: 573 --------GALELEYEGFY---------ERGFFVTKKKYAVIDEEGKIT-TRGLEIVRRD 614

Query: 947 ELKLIKVFQAELFDKFLHGSTIEECYSAVAAVANR 981
             ++ K  QA + +  L    +E+    V  V  +
Sbjct: 615 WSEIAKETQARVLEALLKDGDVEKAVRIVKEVTEK 649


>gi|301015727|pdb|2XHB|A Chain A, Crystal Structure Of Dna Polymerase From Thermococcus
           Gorgonarius In Complex With Hypoxanthine-Containing Dna
          Length = 773

 Score = 93.6 bits (231), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 95/355 (26%), Positives = 158/355 (44%), Gaps = 56/355 (15%)

Query: 189 CIVDLREYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLLEKRVDLLQRAEVHVCAFDIET 248
            +VD+ EYD+P+  R+ ID  +                    + +    E+ + AFDIET
Sbjct: 105 AVVDIYEYDIPFAKRYLIDKGL--------------------IPMEGDEELKMLAFDIET 144

Query: 249 TKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNVN 308
             L  +  +     I+MISY  D +G  +I  + +     DL Y           V  V+
Sbjct: 145 --LYHEGEEFAEGPILMISYA-DEEGARVITWKNI-----DLPY-----------VDVVS 185

Query: 309 NEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKM-----SEELGFQCDK 363
            E E+++ +   ++E  P + +TYNGD F + +L+ R+   G K        E   Q   
Sbjct: 186 TEKEMIKRFLKVVKEKDPDVLITYNGDNFAFAYLKKRSEKLGVKFILGREGSEPKIQRMG 245

Query: 364 NQGECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRF--AKE 421
           ++     K   H D +  ++R   LP  +  L+AV +A  G    +V  E++ +     E
Sbjct: 246 DRFAVEVKGRIHFDLYPVIRRTINLP--TYTLEAVYEAIFGQPKEKVYAEEIAQAWETGE 303

Query: 422 KPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAY 481
             + +A YS+ DA  TY L   +  P    L+ ++  S  +V R  +G L E  L+ +AY
Sbjct: 304 GLERVARYSMEDAKVTYELGKEF-FPMEAQLSRLVGQSLWDVSRSSTGNLVEWFLLRKAY 362

Query: 482 KANVICPNKHQSDPEKFYRNHLLESETYIGGHVECLESGVFRSDLPTSFK-LDPS 535
           + N + PNK         R      E+Y GG+V+  E G++ + +   F+ L PS
Sbjct: 363 ERNELAPNKPDE------RELARRRESYAGGYVKEPERGLWENIVYLDFRSLYPS 411



 Score = 64.3 bits (155), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 78/303 (25%), Positives = 120/303 (39%), Gaps = 62/303 (20%)

Query: 770  LYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNA-RLLIEKIG-KPL 827
            L D  Q A K + NSFYGY     ARWY  E A  VT  G + I+   R + EK G K L
Sbjct: 478  LLDYRQRAIKILANSFYGYYGYAKARWYCKECAESVTAWGRQYIETTIREIEEKFGFKVL 537

Query: 828  ELDTDGIWCVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVS 887
              DTDG +  +PG+  E    K K+    +    P ++                      
Sbjct: 538  YADTDGFFATIPGADAETVKKKAKEFLDYINAKLPGLL---------------------- 575

Query: 888  KTYETHSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGE 947
                       E E +G YK            + KK+YAV +++  +   +G EI RR  
Sbjct: 576  -----------ELEYEGFYKRGFF--------VTKKKYAVIDEEDKIT-TRGLEIVRRDW 615

Query: 948  LKLIKVFQAELFDKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESST 1007
             ++ K  QA + +  L    +EE    V  V  +          ++   +L+ Y      
Sbjct: 616  SEIAKETQARVLEAILKHGDVEEAVRIVKEVTEKL------SKYEVPPEKLVIY----EQ 665

Query: 1008 MSKSLADYGEQKSCAVTTARRLSDFLGDTMVKDKGLRCQYIVACEPQGTP-VSERAVPVA 1066
            +++ L DY +     V  A+RL+      +    G    YIV    +G+  + +RA+P  
Sbjct: 666  ITRDLKDY-KATGPHVAVAKRLA---ARGIKIRPGTVISYIVL---KGSGRIGDRAIPFD 718

Query: 1067 IFE 1069
             F+
Sbjct: 719  EFD 721


>gi|3913528|sp|P74918.1|DPOL_THEFM RecName: Full=DNA polymerase; AltName: Full=Pol Tfu; Contains:
           RecName: Full=Endonuclease PI-TfuI; AltName: Full=Tfu
           pol-1 intein; Contains: RecName: Full=Endonuclease
           PI-TfuII; AltName: Full=Tfu pol-2 intein
 gi|1655695|emb|CAA93738.1| DNA polymerase and endonuclease [Thermococcus fumicolans]
          Length = 1523

 Score = 93.2 bits (230), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 98/393 (24%), Positives = 170/393 (43%), Gaps = 62/393 (15%)

Query: 189 CIVDLREYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLLEKRVDLLQRAEVHVCAFDIET 248
            +VD+ EYD+P+  R+ ID  +                    + +    E+ + AFDIET
Sbjct: 105 AVVDIYEYDIPFAKRYLIDKGL--------------------IPMEGDEELKMLAFDIET 144

Query: 249 TKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNVN 308
             L  +  +     I+MISY  D +G  +I  + +     DL Y           V  V+
Sbjct: 145 --LYHEGEEFAEGPILMISYA-DEEGARVITWKKI-----DLPY-----------VDVVS 185

Query: 309 NEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKM-----SEELGFQCDK 363
            E E+++ +   ++E  P + +TYNGD FD+ +L+ R+   G K        E   Q   
Sbjct: 186 TEKEMIKRFLKVVKEKDPDVLITYNGDNFDFAYLKKRSEKLGVKFILGRDGSEPKIQRMG 245

Query: 364 NQGECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRF--AKE 421
           ++     K   H D +  ++    LP  +  L+AV +A  G    +V  E++ +     E
Sbjct: 246 DRFAVEVKGRIHFDLYPVIRHTINLP--TYTLEAVYEAIFGQPKEKVYAEEIAQAWETGE 303

Query: 422 KPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAY 481
             + +A YS+ DA  TY L   +  P    L+ ++  S  +V R  +G L E  L+ +AY
Sbjct: 304 GLERVARYSMEDAKVTYELGREFF-PMEAQLSRLVGQSFWDVSRSSTGNLVEWYLLRKAY 362

Query: 482 KANVICPNKHQSDPEKFYRNHLLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQLL 541
           + N + PNK      +  R        Y GG+V+  E G++ +     F+  P+  + ++
Sbjct: 363 ERNELAPNKPSGRELERRRG------GYAGGYVKEPERGLWENIAYLDFRCHPADTKVIV 416

Query: 542 NNLD-------RDLQYAIKVEGKMDLESVSNYD 567
                      R+  Y + ++G   ++ V  YD
Sbjct: 417 KGKGVVNISEVREGDYVLGIDGWQKVQRVWEYD 449


>gi|223478327|ref|YP_002582532.1| DNA polymerase family B [Thermococcus sp. AM4]
 gi|214033553|gb|EEB74380.1| DNA polymerase family B [Thermococcus sp. AM4]
          Length = 1699

 Score = 93.2 bits (230), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 96/355 (27%), Positives = 160/355 (45%), Gaps = 56/355 (15%)

Query: 189 CIVDLREYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLLEKRVDLLQRAEVHVCAFDIET 248
            ++D+ EYD+P+  R+ ID  +                    + +    E+ + AFDIET
Sbjct: 105 AVIDIYEYDIPFAKRYLIDKGL--------------------IPMEGDEELTMLAFDIET 144

Query: 249 TKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNVN 308
             L  +  +     I+MISY  DG    +I  + +     DL Y           V  V+
Sbjct: 145 --LYHEGEEFGTGPILMISYA-DGSEARVITWKKI-----DLPY-----------VDVVS 185

Query: 309 NEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMS-----EELGFQCDK 363
            E E+++ +   ++E  P + +TYNGD FD+ +L+ R    G K +      E   Q   
Sbjct: 186 TEKEMIKRFLRIVKEKDPDVLITYNGDNFDFAYLKKRCEKLGIKFTLGRDGSEPKIQRMG 245

Query: 364 NQGECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRF--AKE 421
           ++     K   H D +  ++R   LP  +  L+AV +A  G    +V  E++ +   + E
Sbjct: 246 DRFAVEVKGRIHFDLYPVIRRTINLP--TYTLEAVYEAVFGKPKEKVYAEEIAQAWESGE 303

Query: 422 KPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAY 481
             + +A YS+ DA  TY L   +  P    L+ +I  S  +V R  +G L E  L+ +AY
Sbjct: 304 GLERVARYSMEDAKVTYELGREFF-PMEAQLSRLIGQSLWDVSRSSTGNLVEWFLLRKAY 362

Query: 482 KANVICPNKHQSDPEKFYRNHLLESETYIGGHVECLESGVFRSDLPTSFK-LDPS 535
           + N + PNK   D ++  R        Y GG+V+  E G++ + +   F+ L PS
Sbjct: 363 ERNELAPNK--PDEKELARRR----GGYAGGYVKEPERGLWDNIVYLDFRSLYPS 411


>gi|332308985|gb|AEE39463.1| DNA polymerase [Thermococcus celericrescens]
          Length = 775

 Score = 92.4 bits (228), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 93/357 (26%), Positives = 155/357 (43%), Gaps = 67/357 (18%)

Query: 189 CIVDLREYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLLEKRVDLLQRAEVHVCAFDIET 248
            +VD+ EYD+P+  R+ ID  +                    + +    E+ + AFDIET
Sbjct: 105 AVVDIYEYDIPFAKRYLIDKGI--------------------IPMEGDEELKMLAFDIET 144

Query: 249 TKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNVN 308
             L  +  +     I+MISY  + +  +I  ++       DL +           V  V+
Sbjct: 145 --LYHEGEEFAEGPILMISYADENEARVITWKKI------DLPF-----------VDVVS 185

Query: 309 NEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELG-------FQC 361
            E E+++ +   ++E  P + +TYNGD FD+ +L+ R    G K +  LG        Q 
Sbjct: 186 TEKEMIKRFLKVIKEKDPDVLITYNGDNFDFAYLKKRCEKFGIKFT--LGRDGSDPKIQR 243

Query: 362 DKNQGECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRF--A 419
             ++     K   H D +  + R   LP  +  L+AV +A  G    +V PE++      
Sbjct: 244 MGDRFAVEVKGRIHFDLYPVILRTVNLP--TYTLEAVYEAIFGTPKEKVYPEEITTAWET 301

Query: 420 KEKPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQ 479
            E  + +A YS+ DA  T+ L   +  P    L+ ++  S  +V R  +G L E  L+ +
Sbjct: 302 GEGLERVARYSMEDAKVTFELGREF-FPMEAQLSRLVGQSFWDVSRSSTGNLVEWFLLRK 360

Query: 480 AYKANVICPNKHQSDPEKFYRNHLLESETYIGGHVECLESGV--------FRSDLPT 528
           AY+ N + PNK         R  +    +Y GG+V+  E G+        FRS  P+
Sbjct: 361 AYERNELAPNKPDE------RELVRRRNSYTGGYVKEPERGLWDNIVYLDFRSLYPS 411



 Score = 51.6 bits (122), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 61/214 (28%), Positives = 87/214 (40%), Gaps = 44/214 (20%)

Query: 770 LYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQ-NARLLIEKIG-KPL 827
           L D  Q A K + NS+YGY     ARWY  E A  VT  G + I+ + R + EK G K L
Sbjct: 478 LLDYRQRAIKILANSYYGYYAYARARWYCKECAESVTAWGREYIEMSIREIEEKYGFKVL 537

Query: 828 ELDTDGIWCVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVS 887
             DTDG    +PG+  E    K  +  K +    P                         
Sbjct: 538 YADTDGFHATIPGADAETVKKKAMEFLKYINAKLP------------------------- 572

Query: 888 KTYETHSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGE 947
                    ++E E +G YK            + KK+YAV +++G +   +G EI RR  
Sbjct: 573 --------GALELEYEGFYKRGFF--------VTKKKYAVIDEEGKIT-TRGLEIVRRDW 615

Query: 948 LKLIKVFQAELFDKFLHGSTIEECYSAVAAVANR 981
            ++ K  QA + +  L    +EE  S V  V  +
Sbjct: 616 SEIAKETQARVLEALLKDGNVEEAVSIVKEVTEK 649


>gi|13878475|sp|Q9HH84.1|DPOL_THEG8 RecName: Full=DNA polymerase; Contains: RecName: Full=Endonuclease
           PI-TspGE8I; AltName: Full=Tsp-GE8 pol-1 intein;
           Contains: RecName: Full=Endonuclease PI-TspGE8II;
           AltName: Full=Tsp-GE8 pol-2 intein
 gi|10799895|emb|CAC12850.1| DNA polymerase and endonucleases [Thermococcus sp. GE8]
          Length = 1699

 Score = 92.4 bits (228), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 95/355 (26%), Positives = 160/355 (45%), Gaps = 56/355 (15%)

Query: 189 CIVDLREYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLLEKRVDLLQRAEVHVCAFDIET 248
            ++D+ EYD+P+  R+ ID  +                    + +    ++ + AFDIET
Sbjct: 105 AVIDIYEYDIPFAKRYLIDKGL--------------------IPMEGDEKLKMLAFDIET 144

Query: 249 TKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNVN 308
             L  +  +     I+MISY  D +G  +I  + V     DL Y           V  V+
Sbjct: 145 --LYHEGEEFAEGPILMISYA-DEEGARVITWKKV-----DLPY-----------VDVVS 185

Query: 309 NEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKM-----SEELGFQCDK 363
            E E+++ +   ++E  P + +TYNGD FD+ +L+ R+   G K        E   Q   
Sbjct: 186 TEKEMIKRFLRVVKEKDPDVLITYNGDNFDFAYLKRRSEKLGVKFILGRDGSEPKIQRMG 245

Query: 364 NQGECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRF--AKE 421
           ++     K   H D +  ++R   LP  +  L+AV +A  G    +V  E++       E
Sbjct: 246 DRFAVEVKGRIHFDLYPVIRRTINLP--TYTLEAVYEAIFGKPKEKVYAEEIATAWETGE 303

Query: 422 KPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAY 481
             + +A YS+ DA  T+ L   +  P    L+ +I  S  +V R  +G L E  L+ +AY
Sbjct: 304 GLERVARYSMEDAKVTFELGKEFF-PMEAQLSRLIGQSLWDVSRSSTGNLVEWFLLRKAY 362

Query: 482 KANVICPNKHQSDPEKFYRNHLLESETYIGGHVECLESGVFRSDLPTSFK-LDPS 535
           + N + PNK   D  +  R      ++Y GG+V+  E G++ + +   F+ L PS
Sbjct: 363 ERNELAPNK--PDERELARRR----QSYAGGYVKEPERGLWNNIVYLDFRSLYPS 411


>gi|117958105|gb|ABK59374.1| PolB precursor [Thermococcus thioreducens]
          Length = 1311

 Score = 91.7 bits (226), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 95/355 (26%), Positives = 156/355 (43%), Gaps = 56/355 (15%)

Query: 189 CIVDLREYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLLEKRVDLLQRAEVHVCAFDIET 248
            +VD+ EYD+P+  R+ ID  +                    + +    E+ + AFDIET
Sbjct: 105 AVVDIYEYDIPFAKRYLIDKGL--------------------IPMEGDEELKMLAFDIET 144

Query: 249 TKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNVN 308
             L  +  +     I+MISY  D  G  +I  + +     DL Y           V  V+
Sbjct: 145 --LYHEGEEFGTGPILMISYA-DEDGARVITWKKI-----DLPY-----------VDVVS 185

Query: 309 NEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMS-----EELGFQCDK 363
            E E+++ +   ++E  P + +TYNGD FD+ +L+ R    G K +      E   Q   
Sbjct: 186 TEKEMIKRFLKVVKEKDPDVLITYNGDNFDFAYLKKRCEKLGIKFTLGRDGSEPKIQRMG 245

Query: 364 NQGECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRF--AKE 421
           ++     K   H D +  ++R   LP  +  L+AV +A  G    +V  E++     + E
Sbjct: 246 DRFAVEVKGRIHFDLYPLIRRTINLP--TYTLEAVYEAVFGKPKEKVYAEEIALAWESGE 303

Query: 422 KPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAY 481
             + +A YS+ DA  T+ L   +  P    L+ +I  S  +V R  +G L E  L+ +AY
Sbjct: 304 GLERVARYSMEDAKVTFELGREFF-PMEAQLSRLIGQSLWDVSRSSTGNLVEWFLLRKAY 362

Query: 482 KANVICPNKHQSDPEKFYRNHLLESETYIGGHVECLESGVFRSDLPTSFK-LDPS 535
           + N + PNK         R        Y GG+V+  E G++ + +   F+ L PS
Sbjct: 363 ERNELAPNKPNE------RELARRRGGYAGGYVKEPERGLWDNIVYLDFRSLYPS 411



 Score = 43.9 bits (102), Expect = 0.99,   Method: Compositional matrix adjust.
 Identities = 60/225 (26%), Positives = 91/225 (40%), Gaps = 49/225 (21%)

Query: 759  IKIQEAQDMVVLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNA-R 817
            + ++E ++ +  +  L  AH    NS+YGY     ARWY  E A  VT  G + I+ A R
Sbjct: 1009 LSVEEDENFLAGF-GLLYAH----NSYYGYYGYARARWYCRECAESVTAWGREYIEMAIR 1063

Query: 818  LLIEKIG-KPLELDTDGIWCVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTN 876
             L EK G K L  DTDG+   +PG+  E    K  +  K +    P ++           
Sbjct: 1064 ELEEKFGFKVLYADTDGLHATIPGADAETVKKKAMEFLKYINPKLPGLL----------- 1112

Query: 877  DQYQTLVDPVSKTYETHSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAE 936
                                  E E +G Y             + KK+YAV +++G +  
Sbjct: 1113 ----------------------ELEYEGFYARGFF--------VTKKKYAVIDEEGKIT- 1141

Query: 937  LKGFEIKRRGELKLIKVFQAELFDKFLHGSTIEECYSAVAAVANR 981
             +G EI RR   ++ K  QA + +  L    +EE    V  V  +
Sbjct: 1142 TRGLEIVRRDWSEIAKETQARVLEAILRHGDVEEAVRIVKEVTEK 1186


>gi|332158501|ref|YP_004423780.1| DNA polymerase I [Pyrococcus sp. NA2]
 gi|331033964|gb|AEC51776.1| DNA polymerase I [Pyrococcus sp. NA2]
          Length = 775

 Score = 90.9 bits (224), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 96/355 (27%), Positives = 153/355 (43%), Gaps = 55/355 (15%)

Query: 189 CIVDLREYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLLEKRVDLLQRAEVHVCAFDIET 248
            ++D+ EYD+P+  R+ ID  +                    + +    E+   A DIET
Sbjct: 105 AVIDIFEYDIPFAKRYLIDKGL--------------------IPMEGNEELTFLAVDIET 144

Query: 249 TKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNVN 308
             L  +  +     I+MISY  D +G  +I  + +     DL Y           V  V 
Sbjct: 145 --LYHEGEEFGKGPIIMISYA-DEEGAKVITWKKI-----DLPY-----------VEVVA 185

Query: 309 NEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKM-----SEELGFQCDK 363
           NE E+++     ++E  P + +TYNGD FD+P+L  RA   G K+     + E   Q   
Sbjct: 186 NEREMIKRLIKVIREKDPDVIITYNGDNFDFPYLLKRAEKLGMKLPLGRDNSEPKMQRLG 245

Query: 364 NQGECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRF--AKE 421
           +      K   H D F  ++R   LP  +  L+AV +A  G    +V P ++       +
Sbjct: 246 DSLAVEIKGRIHFDLFPVIRRTINLP--TYTLEAVYEAIFGKQKEKVYPHEIAEAWETGK 303

Query: 422 KPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAY 481
             + +A YS+ DA  TY L   +  P    LA ++     +V R  +G L E  L+ +AY
Sbjct: 304 GLERVAKYSMEDAKVTYELGKEF-FPMEAQLARLVGQPLWDVSRSSTGNLVEWYLLRKAY 362

Query: 482 KANVICPNKHQSDPEKFYRNHLLESETYIGGHVECLESGVFRSDLPTSFK-LDPS 535
           + N + PNK                E+Y GG+V+  E G++   +   F+ L PS
Sbjct: 363 ERNELAPNKPDER-----EYERRLRESYEGGYVKEPERGLWEGIVSLDFRSLYPS 412



 Score = 65.1 bits (157), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 84/321 (26%), Positives = 139/321 (43%), Gaps = 62/321 (19%)

Query: 760  KIQEAQDMV--VLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNAR 817
            +++E++D V   L D  Q A K + NSFYGY     ARWY  E A  VT  G + I+  R
Sbjct: 467  RMKESKDPVERKLLDYRQRAIKILANSFYGYYGYAKARWYCKECAESVTAWGRQYIELVR 526

Query: 818  LLIEKIG-KPLELDTDGIWCVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTN 876
              +E+ G K L +DTDG++  +PG        K  +  K+  + +           N  N
Sbjct: 527  RELEERGFKVLYIDTDGLYATIPGE-------KNWEEIKRRALEFV----------NYIN 569

Query: 877  DQYQTLVDPVSKTYETHSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAE 936
             +   +               +E E +G Y             + KK+YA+ +++G +  
Sbjct: 570  SKLPGI---------------LELEYEGFYTRGFF--------VTKKKYALIDEEGKIV- 605

Query: 937  LKGFEIKRRGELKLIKVFQAELFDKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADS 996
             +G EI RR   ++ K  QA++ +  L    +EE    V  V  +    L N   +I   
Sbjct: 606  TRGLEIVRRDWSEIAKETQAKVLEAILKHGNVEEAVKIVKEVTEK----LSNY--EIPVE 659

Query: 997  ELIDYISESSTMSKSLADYGEQKSCAVTTARRLSDFLGDTMVKDKGLRCQYIVACEPQGT 1056
            +L+ Y      +++ L +Y +     V  A+RL+      +    G+   Y+V       
Sbjct: 660  KLVIY----EQITRPLNEY-KAIGPHVAVAKRLA---AKGIKIKPGMVIGYVVLR--GDG 709

Query: 1057 PVSERAVPVAIFETDAEIMKF 1077
            P+S+RA  +AI E D +  K+
Sbjct: 710  PISKRA--IAIEEFDGKKHKY 728


>gi|74507331|sp|Q9HH06.1|DPOL_PYRGL RecName: Full=DNA polymerase
 gi|10799899|emb|CAC12849.1| DNA polymerase [Pyrococcus glycovorans]
          Length = 775

 Score = 90.5 bits (223), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 120/492 (24%), Positives = 198/492 (40%), Gaps = 102/492 (20%)

Query: 65  CIDLYFVSQDG-----------STFKSKY--KFRPYFYAATKEKMEMDVEAYLRRRYESQ 111
            +D  ++++DG             FK +Y   FRPY YA  K+  ++D    +      +
Sbjct: 2   ILDADYITEDGKPIIRIFKKENGEFKVEYDRNFRPYIYALLKDDSQIDEVKKITAERHGK 61

Query: 112 IADIEILEKEDLDLKNHLSGLHKSYLKISFDTVQQLMDVKKDLLHVVERNQAKFDAAEAY 171
           I  I  +EK    +K    G      K+ F+  Q +  ++  +                 
Sbjct: 62  IVRIVDVEK----VKKKFLGRPIEVWKLYFEHPQDVPAIRDKI----------------- 100

Query: 172 ESILTGKREQRPQDFLDCIVDLREYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLLEKRV 231
                  RE         +VD+ EYD+P+  R+ ID  +                    +
Sbjct: 101 -------REH------PAVVDIFEYDIPFAKRYLIDKGL--------------------I 127

Query: 232 DLLQRAEVHVCAFDIETTKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLE 291
            +    E+ + AFDIET  L  +  +     I+MISY  D +G  +I  + V     DL 
Sbjct: 128 PMEGDEELKLLAFDIET--LYHEGEEFAKGPIIMISYA-DEEGAKVITWKKV-----DLP 179

Query: 292 YTPKPEFEGYFKVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGF 351
           Y           V  V++E E+++ +   ++E  P + +TYNGD FD P+L  RA   G 
Sbjct: 180 Y-----------VEVVSSEREMIKRFLKVIREKDPDVIITYNGDSFDLPYLVKRAEKLGI 228

Query: 352 KM-----SEELGFQCDKNQGECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYD 406
           K+       E   Q   +      K   H D +  ++R   LP  +  L+AV +A  G  
Sbjct: 229 KLPLGRDGSEPKMQRLGDMTAVEIKGRIHFDLYHVIRRTINLP--TYTLEAVYEAIFGKP 286

Query: 407 PLEVNPEDMVRF--AKEKPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVL 464
             +V   ++       +  + +A YS+ DA  TY L   +  P    L+ ++     +V 
Sbjct: 287 KEKVYAHEIAEAWETGKGLERVAKYSMEDAKVTYELGREFF-PMEAQLSRLVGQPLWDVS 345

Query: 465 RKGSGTLCEMLLMVQAYKANVICPNKHQSDPEKFYRNHLLESETYIGGHVECLESGVFRS 524
           R  +G L E  L+ +AY+ N + PNK                E+Y GG+V+  E G++  
Sbjct: 346 RSSTGNLVEWYLLRKAYERNELAPNKPDER-----EYERRLRESYAGGYVKEPEKGLWEG 400

Query: 525 DLPTSFK-LDPS 535
            +   F+ L PS
Sbjct: 401 LVSLDFRSLYPS 412



 Score = 55.5 bits (132), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 75/296 (25%), Positives = 121/296 (40%), Gaps = 60/296 (20%)

Query: 770  LYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARL-LIEKIG-KPL 827
            + D  Q A K + NS+YGY     ARWY  E A  VT  G + I+  R  L EK G K L
Sbjct: 479  MLDYRQRAIKILANSYYGYYGYAKARWYCKECAESVTAWGREYIEFVRKELEEKFGFKVL 538

Query: 828  ELDTDGIWCVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVS 887
             +DTDG++  +PG+ PE    K  +  + +    P ++                      
Sbjct: 539  YIDTDGLYATIPGAKPEEIKRKALEFVEYINAKLPGLL---------------------- 576

Query: 888  KTYETHSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGE 947
                       E E +G Y             + KK+YA+ +++G +   +G EI RR  
Sbjct: 577  -----------ELEYEGFYVRGFF--------VTKKKYALIDEEGKII-TRGLEIVRRDW 616

Query: 948  LKLIKVFQAELFDKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESST 1007
             ++ K  QA++ +  L    +EE    V  V  +          +I   +L+ Y      
Sbjct: 617  SEIAKETQAKVLEAILKHGNVEEAVKIVKEVTEKL------SKYEIPPEKLVIY----EQ 666

Query: 1008 MSKSLADYGEQKSCAVTTARRLSDFLGDTMVKDKGLRCQYIVACEPQGTPVSERAV 1063
            +++ L +Y +     V  A+RL+      +    G+   YIV       P+S+RA+
Sbjct: 667  ITRPLHEY-KAIGPHVAVAKRLA---ARGVKVRPGMVIGYIVLR--GDGPISKRAI 716


>gi|7288074|emb|CAB81809.1| DNA polymerase [Pyrococcus glycovorans]
          Length = 775

 Score = 90.5 bits (223), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 120/492 (24%), Positives = 198/492 (40%), Gaps = 102/492 (20%)

Query: 65  CIDLYFVSQDG-----------STFKSKY--KFRPYFYAATKEKMEMDVEAYLRRRYESQ 111
            +D  ++++DG             FK +Y   FRPY YA  K+  ++D    +      +
Sbjct: 2   ILDADYITEDGKPIIRIFKKENGEFKVEYDRNFRPYIYALLKDDSQIDEVKKITAERHGK 61

Query: 112 IADIEILEKEDLDLKNHLSGLHKSYLKISFDTVQQLMDVKKDLLHVVERNQAKFDAAEAY 171
           I  I  +EK    +K    G      K+ F+  Q +  ++  +                 
Sbjct: 62  IVRIVDVEK----VKKKFLGRPIEVWKLYFEHPQDVPAIRDKI----------------- 100

Query: 172 ESILTGKREQRPQDFLDCIVDLREYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLLEKRV 231
                  RE         +VD+ EYD+P+  R+ ID  +                    +
Sbjct: 101 -------REH------PAVVDIFEYDIPFAKRYLIDKGL--------------------I 127

Query: 232 DLLQRAEVHVCAFDIETTKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLE 291
            +    E+ + AFDIET  L  +  +     I+MISY  D +G  +I  + V     DL 
Sbjct: 128 PMEGDEELKLLAFDIET--LYHEGEEFAKGPIIMISYA-DEEGAKVITWKKV-----DLP 179

Query: 292 YTPKPEFEGYFKVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGF 351
           Y           V  V++E E+++ +   ++E  P + +TYNGD FD P+L  RA   G 
Sbjct: 180 Y-----------VEVVSSEREMIKRFLKVIREKDPDVIITYNGDSFDLPYLVKRAEKLGI 228

Query: 352 KM-----SEELGFQCDKNQGECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYD 406
           K+       E   Q   +      K   H D +  ++R   LP  +  L+AV +A  G  
Sbjct: 229 KLPLGRDGSEPKMQRLGDMTAVEIKGRIHFDLYHVIRRTINLP--TYTLEAVYEAIFGKP 286

Query: 407 PLEVNPEDMVRF--AKEKPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVL 464
             +V   ++       +  + +A YS+ DA  TY L   +  P    L+ ++     +V 
Sbjct: 287 KEKVYAHEIAEAWETGKGLERVAKYSMEDAKVTYELGREFF-PMEAQLSRLVGQPLWDVS 345

Query: 465 RKGSGTLCEMLLMVQAYKANVICPNKHQSDPEKFYRNHLLESETYIGGHVECLESGVFRS 524
           R  +G L E  L+ +AY+ N + PNK                E+Y GG+V+  E G++  
Sbjct: 346 RSSTGNLVEWYLLRKAYERNELAPNKPDER-----EYERRLRESYAGGYVKEPEKGLWEG 400

Query: 525 DLPTSFK-LDPS 535
            +   F+ L PS
Sbjct: 401 LVSLDFRSLYPS 412



 Score = 55.5 bits (132), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 75/296 (25%), Positives = 121/296 (40%), Gaps = 60/296 (20%)

Query: 770  LYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARL-LIEKIG-KPL 827
            + D  Q A K + NS+YGY     ARWY  E A  VT  G + I+  R  L EK G K L
Sbjct: 479  MLDYRQRAIKILANSYYGYYGYAKARWYCKECAESVTAWGREYIEFVRKELEEKFGFKVL 538

Query: 828  ELDTDGIWCVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVS 887
             +DTDG++  +PG+ PE    K  +  + +    P ++                      
Sbjct: 539  YIDTDGLYATIPGAKPEEIKRKALEFVEYINAKLPGLL---------------------- 576

Query: 888  KTYETHSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGE 947
                       E E +G Y             + KK+YA+ +++G +   +G EI RR  
Sbjct: 577  -----------ELEYEGFYVRGFF--------VTKKKYALIDEEGKII-TRGLEIVRRDW 616

Query: 948  LKLIKVFQAELFDKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESST 1007
             ++ K  QA++ +  L    +EE    V  V  +          +I   +L+ Y      
Sbjct: 617  SEIAKETQAKVLEAILKHGNVEEAVKIVKEVTEKL------SKYEIPPEKLVIY----EQ 666

Query: 1008 MSKSLADYGEQKSCAVTTARRLSDFLGDTMVKDKGLRCQYIVACEPQGTPVSERAV 1063
            +++ L +Y +     V  A+RL+      +    G+   YIV       P+S+RA+
Sbjct: 667  ITRPLHEY-KAIGPHVAVAKRLA---ARGVKVRPGMVIGYIVLR--GDGPISKRAI 716


>gi|340508172|gb|EGR33936.1| hypothetical protein IMG5_030340 [Ichthyophthirius multifiliis]
          Length = 263

 Score = 90.1 bits (222), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 51/181 (28%), Positives = 98/181 (54%), Gaps = 10/181 (5%)

Query: 1777 IVRDAIHHMKKMNNDQHNSPGVMQTAANIHKVDAPLEFIKHVCAAFALDQNVQHDVLVMR 1836
            IV+D     ++ + +  NS  + Q  A  +  ++ LEF+  +     LD  +  +++V++
Sbjct: 53   IVQDDAPISQEQDENNENS-QIEQLRAKQNYENSILEFLNFLFHILNLDPKINEEIIVIK 111

Query: 1837 KNLLKYVRVREFAPEAEFRDPCPSFILPNVICSYCNDCRDLDLCRDMALLAQDWHCAMPQ 1896
            +N LK +++ +F   AE+++PC    + +V+C  C    +LD+ RD+      W C   +
Sbjct: 112  RNCLKMLKINDFQKIAEYKEPCIILKIQDVVCKNCLHVIELDVFRDL------WVCQ--E 163

Query: 1897 CGQPYDREVMENALLQIVRQRERLYHLQDLVCIRCNQVKAAHLAEQC-ACAGSFRCKEDA 1955
            C  PYD+  +EN L+Q ++    LY +QDL C++C  VK  +L+  C  C+  ++   D+
Sbjct: 164  CSIPYDKYYLENKLIQEIQNEITLYQIQDLYCVKCFGVKDDYLSVNCPGCSTGYKVNIDS 223

Query: 1956 S 1956
            +
Sbjct: 224  N 224


>gi|212223145|ref|YP_002306381.1| family B-type DNA-dependent polymerase [Thermococcus onnurineus
           NA1]
 gi|83338486|gb|ABC11972.1| family B-type DNA-dependent polymerase precursor [Thermococcus
           onnurineus NA1]
 gi|212008102|gb|ACJ15484.1| family B-type DNA-dependent polymerase precursor [Thermococcus
           onnurineus NA1]
          Length = 1308

 Score = 89.7 bits (221), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 93/354 (26%), Positives = 156/354 (44%), Gaps = 56/354 (15%)

Query: 190 IVDLREYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLLEKRVDLLQRAEVHVCAFDIETT 249
           ++D+ EYD+P+  R+ ID  +                    V +    E+ + AFDIET 
Sbjct: 106 VIDIYEYDIPFAKRYLIDKGL--------------------VPMEGDEELKMLAFDIET- 144

Query: 250 KLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNVNN 309
            L  +  +     I+MISY  + +  +I  ++       DL Y           V  V+ 
Sbjct: 145 -LYHEGEEFGTGPILMISYADENEARVITWKKI------DLPY-----------VDVVST 186

Query: 310 EIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMS-----EELGFQCDKN 364
           E E+++ +   ++E  P + +TYNGD FD+ +L+ R    G   +      E       +
Sbjct: 187 EKEMIKRFLRVVKEKDPDVLITYNGDNFDFAYLKKRCEKLGISFTLGRDGSEPKIHRMGD 246

Query: 365 QGECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRF--AKEK 422
           +     K   H D +  ++R   LP  +  L+ V +A  G    +V  E++     + E 
Sbjct: 247 RFAVEVKGRIHFDLYPVIRRTINLP--TYTLEVVYEAVFGKPKEKVYAEEITLAWESGEG 304

Query: 423 PQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYK 482
            + +A YS+ DA ATY L   +  P    L+ +I  S  +V R  +G L E  L+ +AY+
Sbjct: 305 LERVARYSMEDAKATYELGREFF-PMEAQLSRLIGQSLWDVSRSSTGNLVEWFLLRKAYE 363

Query: 483 ANVICPNKHQSDPEKFYRNHLLESETYIGGHVECLESGVFRSDLPTSFK-LDPS 535
            N + PNK         RN      +Y GG+V+  E G++ + +   F+ L PS
Sbjct: 364 RNELAPNKPDEGELARRRN------SYAGGYVKEPERGLWDNIVYLDFRSLYPS 411



 Score = 59.3 bits (142), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 54/201 (26%), Positives = 80/201 (39%), Gaps = 44/201 (21%)

Query: 783  NSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQ-NARLLIEKIG-KPLELDTDGIWCVLPG 840
            NS+YGY     ARWY  E A  VT  G + I+   R + EK G K L  DTDG +  +PG
Sbjct: 1026 NSYYGYYGYPRARWYCKECAESVTAWGREYIEMTIREIEEKYGFKVLYADTDGFYATIPG 1085

Query: 841  SFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEF 900
            +  E    K K+  K +    P ++                                 E 
Sbjct: 1086 ADAETVKKKAKEFLKYINAKLPGLL---------------------------------EL 1112

Query: 901  EVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFD 960
            E +G YK            + KK+YAV +++G +   +G EI RR    + K  QA + +
Sbjct: 1113 EYEGFYKRGFF--------VTKKKYAVIDEEGKIV-TRGLEIVRRDWSDIAKETQARVLE 1163

Query: 961  KFLHGSTIEECYSAVAAVANR 981
              L    +E+    V  +  +
Sbjct: 1164 ALLKDGNVEKAVKIVKEITEK 1184


>gi|8569297|pdb|1QHT|A Chain A, Dna Polymerase From Thermococcus Sp. 9on-7 Archaeon
          Length = 775

 Score = 89.0 bits (219), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 96/355 (27%), Positives = 158/355 (44%), Gaps = 56/355 (15%)

Query: 189 CIVDLREYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLLEKRVDLLQRAEVHVCAFDIET 248
            +VD+ EYD+P+  R+ ID  +                    + +    E+ + AF I T
Sbjct: 105 AVVDIYEYDIPFAKRYLIDKGL--------------------IPMEGDEELTMLAFAIAT 144

Query: 249 TKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNVN 308
             L  +  +     I+MISY  DG    +I  + +     DL Y           V  V+
Sbjct: 145 --LYHEGEEFGTGPILMISYA-DGSEARVITWKKI-----DLPY-----------VDVVS 185

Query: 309 NEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMS-----EELGFQCDK 363
            E E+++ +   ++E  P + +TYNGD FD+ +L+ R    G K +      E   Q   
Sbjct: 186 TEKEMIKRFLRVVREKDPDVLITYNGDNFDFAYLKKRCEELGIKFTLGRDGSEPKIQRMG 245

Query: 364 NQGECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRF--AKE 421
           ++     K   H D +  ++R   LP  +  L+AV +A  G    +V  E++ +   + E
Sbjct: 246 DRFAVEVKGRIHFDLYPVIRRTINLP--TYTLEAVYEAVFGKPKEKVYAEEIAQAWESGE 303

Query: 422 KPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAY 481
             + +A YS+ DA  TY L   +  P    L+ +I  S  +V R  +G L E  L+ +AY
Sbjct: 304 GLERVARYSMEDAKVTYELGREFF-PMEAQLSRLIGQSLWDVSRSSTGNLVEWFLLRKAY 362

Query: 482 KANVICPNKHQSDPEKFYRNHLLESETYIGGHVECLESGVFRSDLPTSFK-LDPS 535
           K N + PNK    P++  R        Y GG+V+  E G++ + +   F+ L PS
Sbjct: 363 KRNELAPNK----PDE--RELARRRGGYAGGYVKEPERGLWDNIVYLDFRSLYPS 411



 Score = 65.1 bits (157), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 62/214 (28%), Positives = 86/214 (40%), Gaps = 44/214 (20%)

Query: 770 LYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNA-RLLIEKIG-KPL 827
           L D  Q A K + NSFYGY     ARWY  E A  VT  G + I+   R L EK G K L
Sbjct: 478 LLDYRQRAIKILANSFYGYYGYAKARWYCKECAESVTAWGREYIEMVIRELEEKFGFKVL 537

Query: 828 ELDTDGIWCVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVS 887
             DTDG+   +PG+  E    K K+  K +    P ++                      
Sbjct: 538 YADTDGLHATIPGADAETVKKKAKEFLKYINPKLPGLL---------------------- 575

Query: 888 KTYETHSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGE 947
                      E E +G Y             + KK+YAV +++G +   +G EI RR  
Sbjct: 576 -----------ELEYEGFYVRGFF--------VTKKKYAVIDEEGKIT-TRGLEIVRRDW 615

Query: 948 LKLIKVFQAELFDKFLHGSTIEECYSAVAAVANR 981
            ++ K  QA + +  L    +EE    V  V  +
Sbjct: 616 SEIAKETQARVLEAILKHGDVEEAVRIVKEVTEK 649


>gi|298707998|emb|CBJ34278.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 135

 Score = 88.6 bits (218), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 43/104 (41%), Positives = 65/104 (62%), Gaps = 2/104 (1%)

Query: 33  YDLFSEGDKRLGWLLTFASSSLEDEDTRKVYSCIDLYFVSQDGSTFKSKYKFRPYFYAAT 92
           YD +SEG  RLGW+     +S+ D    +  S +D+YF+ QDG TFK+   ++PYFY   
Sbjct: 33  YDRYSEGPPRLGWIFNMLPTSIPDASGNEK-SGLDMYFLEQDGGTFKATVFYKPYFYVLV 91

Query: 93  KEKMEM-DVEAYLRRRYESQIADIEILEKEDLDLKNHLSGLHKS 135
           KE+  + D    +RRR+E    ++ +++KEDLD+ NHLSG  +S
Sbjct: 92  KEERYIQDCIQCIRRRFEDSAVEVTVVDKEDLDMPNHLSGKLRS 135


>gi|327401413|ref|YP_004342252.1| DNA polymerase Pol2 [Archaeoglobus veneficus SNP6]
 gi|327316921|gb|AEA47537.1| DNA polymerase Pol2 [Archaeoglobus veneficus SNP6]
          Length = 786

 Score = 88.6 bits (218), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 87/361 (24%), Positives = 159/361 (44%), Gaps = 55/361 (15%)

Query: 190 IVDLREYDVPYHIRFAIDNDVRCGQWYDVS-ISSTGPLLEKRVDLLQR------AEVHVC 242
           ++++RE D+P+  R+ ID D+ C     +  +  TG      V  ++R       E+ + 
Sbjct: 109 LLEVREADIPFAYRYLIDKDLACMDGITIECVERTGSFRSYEVKNVKRNPKDDFPELKIL 168

Query: 243 AFDIETTKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYF 302
           AFD E     +  PD + D I++IS                  D ED             
Sbjct: 169 AFDCEMLS-AVGMPDPEKDPIIVIS--------------VKSGDFED------------- 200

Query: 303 KVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCD 362
            + N ++E E+L+ +   ++++ P + V YN D FDWP+++ RA     K+S  L    D
Sbjct: 201 -IINGDDEREVLKRFVKAVKDIDPDVIVGYNQDSFDWPYIKKRAE----KLSVRLDIGRD 255

Query: 363 KNQGECRA---KFACHLDCFAWVKRDSYLPQGSQGLKAV-----TKAKLGYDPLEVNPED 414
           +++   R    K A  L+   +      +    + L+ V     TK +L     ++  +D
Sbjct: 256 RSELAMRGGRPKIAGRLNVDLYDIAMRSIDVKIKKLENVAEFLGTKVELA----DIEAKD 311

Query: 415 MVR-FAKEKPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCE 473
           + + + +   + +  Y+  D + TY++    + P  + L+ +I +  D+V R G G   E
Sbjct: 312 IYKHWTRGDREAVLRYARQDVLNTYFIAEELL-PMHYELSRMIRIPLDDVTRCGRGKQVE 370

Query: 474 MLLMVQAYKANVICPNKHQSDPEKFYRNHLLESETYIGGHVECLESGVFRSDLPTSFKLD 533
            LLM +AYK   + PN  ++  EK+    +LE    +  +V CL+       +  SF + 
Sbjct: 371 WLLMSEAYKLGELAPNPREAG-EKYEGAFVLEPARGLHENVICLDFASMYPSIMISFNIS 429

Query: 534 P 534
           P
Sbjct: 430 P 430



 Score = 45.8 bits (107), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 54/210 (25%), Positives = 77/210 (36%), Gaps = 45/210 (21%)

Query: 770 LYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIG-KPLE 828
           L D  Q   K + NSFYGY     ARWY  E A   T  G   I+ +  + +++G + L 
Sbjct: 489 LLDIKQATLKVLTNSFYGYTGWSLARWYCRECAEATTAWGRHFIKKSAQIAKELGLEVLY 548

Query: 829 LDTDGIWCVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSK 888
            DTD I+    G   E    + + L  KL                               
Sbjct: 549 GDTDSIFVKKSGLNLEELKKEVRKLIGKL------------------------------- 577

Query: 889 TYETHSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGEL 948
                 E  I  E+D  Y A+          + KKRYA    DG +  +KG E++R    
Sbjct: 578 ----REEMPILIEIDEYYSAIFF--------VEKKRYAGLTADGRIV-VKGLEVRRGDWC 624

Query: 949 KLIKVFQAELFDKFLHGSTIEECYSAVAAV 978
           +L K  Q  + +  L     E+  + V  V
Sbjct: 625 ELAKRVQKNVIEIILKDRDPEKAVNYVRKV 654


>gi|321465053|gb|EFX76057.1| hypothetical protein DAPPUDRAFT_55507 [Daphnia pulex]
          Length = 180

 Score = 88.6 bits (218), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 52/148 (35%), Positives = 82/148 (55%), Gaps = 11/148 (7%)

Query: 1484 YRKVSVELKIHHLSVNALLKSNQVNEMEG-GGLFGFD--------QDMNSGPYNNELCGF 1534
            Y  V  E+ +  L+V  LL+S+QV ++E       FD        +DM +  +  EL  +
Sbjct: 23   YTNVCAEMDMDRLAVTTLLQSHQVLDVEDTSSSTAFDVPQGQVSLKDMLNDNHTAELISY 82

Query: 1535 DETTSSAPAFRVVKQLIQRCLTDAVTSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILH 1594
             E+      F+V+K ++   L D     NVF D  + H YRWL SP S L+DP L R+L 
Sbjct: 83   IESAMCLTVFQVLKSVVTSRLRDISVHRNVFTDFQVIHFYRWLRSPTSLLYDPALRRMLQ 142

Query: 1595 KVMQKVFAMLLAEFRKLGATIIFANFSK 1622
             +++  F  LLAEF++LGA++++A+F +
Sbjct: 143  NLVR--FVQLLAEFQRLGASVVYADFGR 168


>gi|389851811|ref|YP_006354045.1| DNA-dependent DNA polymerase family B protein [Pyrococcus sp. ST04]
 gi|388249117|gb|AFK21970.1| DNA-dependent DNA polymerase family B protein [Pyrococcus sp. ST04]
          Length = 1640

 Score = 88.2 bits (217), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 94/358 (26%), Positives = 157/358 (43%), Gaps = 64/358 (17%)

Query: 189 CIVDLREYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLLEKRVDLLQRAEVHVCAFDIET 248
            +V++ EYD+P+  R+ ID  +                    V +    E+ + AFDIET
Sbjct: 105 AVVEIFEYDIPFAKRYLIDKGI--------------------VPMDGDEELKLLAFDIET 144

Query: 249 TKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNVN 308
             L  +  +     I+MISY  D +G  +I  + +     +L Y           V  V+
Sbjct: 145 --LYHEGEEFGKGPILMISYA-DEEGAKVITWKRI-----NLPY-----------VEVVS 185

Query: 309 NEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMS----------EELG 358
           +E E+++ +   ++E  P + +TYNGD FD+P+L  RA   G K+           + LG
Sbjct: 186 SEREMIKRFLKVIREKDPDVIITYNGDSFDFPYLVKRAEKLGIKLPLGRDGSPPKMQRLG 245

Query: 359 FQCDKNQGECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRF 418
              D N  E + +   H D +  V+R   LP  +  L+AV +A  G    +V   ++   
Sbjct: 246 ---DMNAVEIKGR--IHFDLYHVVRRTINLP--TYTLEAVYEAIFGKPKEKVYAHEIAEA 298

Query: 419 --AKEKPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLL 476
               +  + +A YS+ DA  TY L   +  P    L  ++     +V R  +G L E  L
Sbjct: 299 WETGKGLERVAKYSMEDAQVTYELGKEFF-PMEVQLTRLVGQPLWDVSRSSTGNLVEWYL 357

Query: 477 MVQAYKANVICPNKHQSDPEKFYRNHLLESETYIGGHVECLESGVFRSDLPTSFKLDP 534
           + +AY+ N + PNK                E+Y GG+V+  E G++ + +   F+  P
Sbjct: 358 LRKAYERNELAPNKPDER-----EYERRLRESYAGGYVKEPERGLWENIVYLDFRCHP 410



 Score = 42.0 bits (97), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 71/307 (23%), Positives = 126/307 (41%), Gaps = 65/307 (21%)

Query: 759  IKIQEAQDMVVLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARL 818
            + ++E ++ +V +  L  AH    NS+YGY     ARWY  E A  VT  G + I+  R 
Sbjct: 1339 LSVEEDENFLVGF-GLLYAH----NSYYGYYGYAKARWYCKECAESVTAWGREYIELVRK 1393

Query: 819  LIE-KIG-KPLELDTDGIWCVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTN 876
             +E K G K L +DTDG++  +P   P     K  +  + +    P ++           
Sbjct: 1394 ELEGKFGFKVLYIDTDGLYATIPRGDPAEIKKKALEFVRYINEKLPGLL----------- 1442

Query: 877  DQYQTLVDPVSKTYETHSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAE 936
                                  E E +G Y+            + KK+YA+ +++  +  
Sbjct: 1443 ----------------------ELEYEGFYRRGFF--------VTKKKYALIDEEDKII- 1471

Query: 937  LKGFEIKRRGELKLIKVFQAELFDKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADS 996
             +G EI RR   ++ K  QA++ +  L    +E+    V  V  + +        ++   
Sbjct: 1472 TRGLEIVRRDWSEIAKETQAKVLEAILKEGNVEKAVKIVKEVTEKLMKY------EVPPE 1525

Query: 997  ELIDYISESSTMSKSLADYGEQKSCAVTTARRLSDFLGDTMVKDKGLRCQYIVACEPQGT 1056
            +L+ Y      +++ L +Y +     V  A+RL+      +    G+   YIV     G 
Sbjct: 1526 KLVIY----EQITRPLNEY-KAIGPHVAVAKRLA---AKGVKVRPGMVIGYIV-LRGDG- 1575

Query: 1057 PVSERAV 1063
            P+S+RA+
Sbjct: 1576 PISKRAI 1582


>gi|5262689|emb|CAB45774.1| hypothetical protein [Homo sapiens]
          Length = 220

 Score = 87.8 bits (216), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 68/213 (31%), Positives = 91/213 (42%), Gaps = 64/213 (30%)

Query: 1835 MRKNLLKYVRVREFAPEAEFRDPCPSFILPNVICSYCNDCRDLDLCRDM------ALLAQ 1888
            + ++LL+ V V EF+ EA+FRDPC S++LP VIC  CN CRDLDLC+D       A+L Q
Sbjct: 4    LNRDLLRLVDVGEFSEEAQFRDPCRSYVLPEVICRSCNFCRDLDLCKDSSFSEDGAVLPQ 63

Query: 1889 DWHCAMPQCGQPYDR--------EVMENALLQIV-----------------RQRE----- 1918
             W C+   C  PYD         EV++  L+                    R+RE     
Sbjct: 64   -WLCS--NCQAPYDSSAIEMTLVEVLQKKLMAFTLQDLKEADTPKCEEKERRKRELRSSA 120

Query: 1919 -----RLYHLQDL--------------------VCIRCNQVKAAHLAEQCACAGSFRCKE 1953
                 R    Q L                    VC++C  VK   +   C+CAG F    
Sbjct: 121  TGRSCRGASEQRLGDAPSCRVVVHGVQACRMEGVCLKCRGVKETSMPVYCSCAGDFALTI 180

Query: 1954 DASDFRSKMQIFLNIANRQGFQLLQECTSWILE 1986
                F  ++ IF NIA   G   L E   W+L+
Sbjct: 181  HTQVFMEQIGIFRNIAQHYGMSYLLETLEWLLQ 213


>gi|327507712|sp|P0CL76.1|DPOL_PYRAY RecName: Full=DNA polymerase 1; AltName: Full=Pab polymerase
 gi|1495770|emb|CAA90887.1| DNA-dependent DNA polymerase; endonuclease [Pyrococcus sp.]
          Length = 771

 Score = 87.8 bits (216), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 118/492 (23%), Positives = 198/492 (40%), Gaps = 102/492 (20%)

Query: 65  CIDLYFVSQDG-----------STFKSKY--KFRPYFYAATKEKMEMDVEAYLRRRYESQ 111
            ID  ++++DG             FK +Y   FRPY YA  K+   +D    +      +
Sbjct: 2   IIDADYITEDGKPIIRIFKKEKGEFKVEYDRTFRPYIYALLKDDSAIDEVKKITAERHGK 61

Query: 112 IADIEILEKEDLDLKNHLSGLHKSYLKISFDTVQQLMDVKKDLLHVVERNQAKFDAAEAY 171
           I  I  +EK           + K +L    +  +  ++  +D+  + E+ +         
Sbjct: 62  IVRITEVEK-----------VQKKFLGRPIEVWKLYLEHPQDVPAIREKIR--------- 101

Query: 172 ESILTGKREQRPQDFLDCIVDLREYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLLEKRV 231
                    + P      +VD+ EYD+P+  R+ ID  +                     
Sbjct: 102 ---------EHP-----AVVDIFEYDIPFAKRYLIDKGL--------------------T 127

Query: 232 DLLQRAEVHVCAFDIETTKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLE 291
            +    E+   A DIET  L  +  +     I+MISY  D +G  +I  + +     DL 
Sbjct: 128 PMEGNEELTFLAVDIET--LYHEGEEFGKGPIIMISYA-DEEGAKVITWKSI-----DLP 179

Query: 292 YTPKPEFEGYFKVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGF 351
           Y           V  V++E E+++     ++E  P + +TYNGD FD+P+L  RA   G 
Sbjct: 180 Y-----------VEVVSSEREMIKRLVKVIREKDPDVIITYNGDNFDFPYLLKRAEKLGI 228

Query: 352 KM-----SEELGFQCDKNQGECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYD 406
           K+     + E   Q   +      K   H D F  ++R   LP  +  L+AV +A  G  
Sbjct: 229 KLPLGRDNSEPKMQRMGDSLAVEIKGRIHFDLFPVIRRTINLP--TYTLEAVYEAIFGKS 286

Query: 407 PLEVNPEDMVRF--AKEKPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVL 464
             +V   ++       +  + +A YS+ DA  T+ L   +  P    LA ++     +V 
Sbjct: 287 KEKVYAHEIAEAWETGKGLERVAKYSMEDAKVTFELGKEF-FPMEAQLARLVGQPVWDVS 345

Query: 465 RKGSGTLCEMLLMVQAYKANVICPNKHQSDPEKFYRNHLLESETYIGGHVECLESGVFRS 524
           R  +G L E  L+ +AY+ N + PNK                E+Y GG+V+  E G++  
Sbjct: 346 RSSTGNLVEWFLLRKAYERNELAPNKPDER-----EYERRLRESYEGGYVKEPEKGLWEG 400

Query: 525 DLPTSFK-LDPS 535
            +   F+ L PS
Sbjct: 401 IVSLDFRSLYPS 412



 Score = 56.6 bits (135), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 76/313 (24%), Positives = 129/313 (41%), Gaps = 61/313 (19%)

Query: 760  KIQEAQDMV--VLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNAR 817
            +++E++D V   L D  Q A K + NS+YGY     ARWY  E A  VT  G + I   R
Sbjct: 467  RMKESKDPVEKKLLDYRQRAIKILANSYYGYYGYAKARWYCKECAESVTAWGRQYIDLVR 526

Query: 818  LLIEKIG-KPLELDTDGIWCVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTN 876
              +E  G K L +DTDG++  +PG+ P     K     + +    P ++           
Sbjct: 527  RELESSGFKVLYIDTDGLYATIPGAKPNEIKEKALKFVEYINSKLPGLL----------- 575

Query: 877  DQYQTLVDPVSKTYETHSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAE 936
                                  E E +G Y             + KK+YA+ +++G +  
Sbjct: 576  ----------------------ELEYEGFYARGFF--------VTKKKYALIDEEGKIV- 604

Query: 937  LKGFEIKRRGELKLIKVFQAELFDKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADS 996
             +G EI RR   ++ K  QA++ +  L    ++E    V  V  +          +I   
Sbjct: 605  TRGLEIVRRDWSEIAKETQAKVLEAILKHGNVDEAVKIVKEVTEKL------SKYEIPPE 658

Query: 997  ELIDYISESSTMSKSLADYGEQKSCAVTTARRLSDFLGDTMVKDKGLRCQYIVACEPQGT 1056
            +L+ Y      +++ L++Y +     V  A+RL+      +    G+   YIV       
Sbjct: 659  KLVIY----EQITRPLSEY-KAIGPHVAVAKRLA---AKGVKVKPGMVIGYIVLR--GDG 708

Query: 1057 PVSERAVPVAIFE 1069
            P+S+RA+ +  F+
Sbjct: 709  PISKRAIAIEEFD 721


>gi|14521919|ref|NP_127396.1| DNA polymerase I [Pyrococcus abyssi GE5]
 gi|327507711|sp|P0CL77.1|DPOL_PYRAB RecName: Full=DNA polymerase 1; AltName: Full=Pab polymerase
 gi|5459139|emb|CAB50625.1| polI DNA polymerase I [Pyrococcus abyssi GE5]
 gi|380742558|tpe|CCE71192.1| TPA: DNA polymerase I [Pyrococcus abyssi GE5]
          Length = 771

 Score = 87.8 bits (216), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 118/492 (23%), Positives = 198/492 (40%), Gaps = 102/492 (20%)

Query: 65  CIDLYFVSQDG-----------STFKSKY--KFRPYFYAATKEKMEMDVEAYLRRRYESQ 111
            ID  ++++DG             FK +Y   FRPY YA  K+   +D    +      +
Sbjct: 2   IIDADYITEDGKPIIRIFKKEKGEFKVEYDRTFRPYIYALLKDDSAIDEVKKITAERHGK 61

Query: 112 IADIEILEKEDLDLKNHLSGLHKSYLKISFDTVQQLMDVKKDLLHVVERNQAKFDAAEAY 171
           I  I  +EK           + K +L    +  +  ++  +D+  + E+ +         
Sbjct: 62  IVRITEVEK-----------VQKKFLGRPIEVWKLYLEHPQDVPAIREKIR--------- 101

Query: 172 ESILTGKREQRPQDFLDCIVDLREYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLLEKRV 231
                    + P      +VD+ EYD+P+  R+ ID  +                     
Sbjct: 102 ---------EHP-----AVVDIFEYDIPFAKRYLIDKGL--------------------T 127

Query: 232 DLLQRAEVHVCAFDIETTKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLE 291
            +    E+   A DIET  L  +  +     I+MISY  D +G  +I  + +     DL 
Sbjct: 128 PMEGNEELTFLAVDIET--LYHEGEEFGKGPIIMISYA-DEEGAKVITWKSI-----DLP 179

Query: 292 YTPKPEFEGYFKVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGF 351
           Y           V  V++E E+++     ++E  P + +TYNGD FD+P+L  RA   G 
Sbjct: 180 Y-----------VEVVSSEREMIKRLVKVIREKDPDVIITYNGDNFDFPYLLKRAEKLGI 228

Query: 352 KM-----SEELGFQCDKNQGECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYD 406
           K+     + E   Q   +      K   H D F  ++R   LP  +  L+AV +A  G  
Sbjct: 229 KLPLGRDNSEPKMQRMGDSLAVEIKGRIHFDLFPVIRRTINLP--TYTLEAVYEAIFGKS 286

Query: 407 PLEVNPEDMVRF--AKEKPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVL 464
             +V   ++       +  + +A YS+ DA  T+ L   +  P    LA ++     +V 
Sbjct: 287 KEKVYAHEIAEAWETGKGLERVAKYSMEDAKVTFELGKEF-FPMEAQLARLVGQPVWDVS 345

Query: 465 RKGSGTLCEMLLMVQAYKANVICPNKHQSDPEKFYRNHLLESETYIGGHVECLESGVFRS 524
           R  +G L E  L+ +AY+ N + PNK                E+Y GG+V+  E G++  
Sbjct: 346 RSSTGNLVEWFLLRKAYERNELAPNKPDER-----EYERRLRESYEGGYVKEPEKGLWEG 400

Query: 525 DLPTSFK-LDPS 535
            +   F+ L PS
Sbjct: 401 IVSLDFRSLYPS 412



 Score = 54.3 bits (129), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 76/313 (24%), Positives = 129/313 (41%), Gaps = 61/313 (19%)

Query: 760  KIQEAQDMV--VLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNAR 817
            +++E++D V   L D  Q A K + NS+YGY     ARWY  E A  VT  G + I   R
Sbjct: 467  RMKESKDPVEKKLLDYRQRAIKILANSYYGYYGYAKARWYCKECAESVTAWGRQYIDLVR 526

Query: 818  LLIEKIG-KPLELDTDGIWCVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTN 876
              +E  G K L +DTDG++  +PG+  E    K     + +    P ++           
Sbjct: 527  RELESRGFKVLYIDTDGLYATIPGAKHEEIKEKALKFVEYINSKLPGLL----------- 575

Query: 877  DQYQTLVDPVSKTYETHSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAE 936
                                  E E +G Y             + KK+YA+ +++G +  
Sbjct: 576  ----------------------ELEYEGFYARGFF--------VTKKKYALIDEEGKIV- 604

Query: 937  LKGFEIKRRGELKLIKVFQAELFDKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADS 996
             +G EI RR   ++ K  QA++ +  L    ++E    V  V  +          +I   
Sbjct: 605  TRGLEIVRRDWSEIAKETQAKVLEAILKHGNVDEAVKIVKEVTEKL------SKYEIPPE 658

Query: 997  ELIDYISESSTMSKSLADYGEQKSCAVTTARRLSDFLGDTMVKDKGLRCQYIVACEPQGT 1056
            +L+ Y      +++ L++Y +     V  A+RL+      +    G+   YIV       
Sbjct: 659  KLVIY----EQITRPLSEY-KAIGPHVAVAKRLA---AKGVKVKPGMVIGYIVLR--GDG 708

Query: 1057 PVSERAVPVAIFE 1069
            P+S+RA+ +  F+
Sbjct: 709  PISKRAIAIEEFD 721


>gi|2494186|sp|Q51334.1|DPOL_PYRSD RecName: Full=DNA polymerase; AltName: Full=Deep vent DNA
           polymerase; Contains: RecName: Full=Endonuclease
           PI-PspI; AltName: Full=Psp-GDB pol intein
 gi|825735|gb|AAA67130.1| Deep Vent DNA polymerase and PI-PspI precursor [Pyrococcus sp.]
          Length = 1312

 Score = 87.0 bits (214), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 91/355 (25%), Positives = 153/355 (43%), Gaps = 55/355 (15%)

Query: 189 CIVDLREYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLLEKRVDLLQRAEVHVCAFDIET 248
            ++D+ EYD+P+  R+ ID  +                    + +    E+ + AFDIET
Sbjct: 105 AVIDIFEYDIPFAKRYLIDKGL--------------------IPMEGDEELKLLAFDIET 144

Query: 249 TKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNVN 308
             L  +  +     I+MISY  + +  +I  ++       DL Y           V  V+
Sbjct: 145 --LYHEGEEFAKGPIIMISYADEEEAKVITWKKI------DLPY-----------VEVVS 185

Query: 309 NEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKM-----SEELGFQCDK 363
           +E E+++ +   ++E  P + +TYNGD FD P+L  RA   G K+       E   Q   
Sbjct: 186 SEREMIKRFLKVIREKDPDVIITYNGDSFDLPYLVKRAEKLGIKLPLGRDGSEPKMQRLG 245

Query: 364 NQGECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRF--AKE 421
           +      K   H D +  ++R   LP  +  L+AV +A  G    +V   ++       +
Sbjct: 246 DMTAVEIKGRIHFDLYHVIRRTINLP--TYTLEAVYEAIFGKPKEKVYAHEIAEAWETGK 303

Query: 422 KPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAY 481
             + +A YS+ DA  TY L   +  P    L+ ++     +V R  +G L E  L+ +AY
Sbjct: 304 GLERVAKYSMEDAKVTYELGREFF-PMEAQLSRLVGQPLWDVSRSSTGNLVEWYLLRKAY 362

Query: 482 KANVICPNKHQSDPEKFYRNHLLESETYIGGHVECLESGVFRSDLPTSFK-LDPS 535
           + N + PNK                E+Y GG+V+  E G++   +   F+ L PS
Sbjct: 363 ERNELAPNKPDER-----EYERRLRESYAGGYVKEPEKGLWEGLVSLDFRSLYPS 412



 Score = 49.3 bits (116), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 54/201 (26%), Positives = 82/201 (40%), Gaps = 44/201 (21%)

Query: 783  NSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARL-LIEKIG-KPLELDTDGIWCVLPG 840
            NS+YGY     ARWY  E A  VT  G + I+  R  L EK G K L +DTDG++  +PG
Sbjct: 1029 NSYYGYYGYAKARWYCKECAESVTAWGREYIEFVRKELEEKFGFKVLYIDTDGLYATIPG 1088

Query: 841  SFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEF 900
            + PE    K  +    +    P ++                                 E 
Sbjct: 1089 AKPEEIKKKALEFVDYINAKLPGLL---------------------------------EL 1115

Query: 901  EVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFD 960
            E +G Y             + KK+YA+ +++G +   +G EI RR   ++ K  QA++ +
Sbjct: 1116 EYEGFYVRGFF--------VTKKKYALIDEEGKII-TRGLEIVRRDWSEIAKETQAKVLE 1166

Query: 961  KFLHGSTIEECYSAVAAVANR 981
              L    +EE    V  V  +
Sbjct: 1167 AILKHGNVEEAVKIVKEVTEK 1187


>gi|390960863|ref|YP_006424697.1| DNA polymerase, family B [Thermococcus sp. CL1]
 gi|390519171|gb|AFL94903.1| DNA polymerase, family B [Thermococcus sp. CL1]
          Length = 1471

 Score = 87.0 bits (214), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 91/355 (25%), Positives = 155/355 (43%), Gaps = 56/355 (15%)

Query: 189 CIVDLREYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLLEKRVDLLQRAEVHVCAFDIET 248
            ++D+ EYD+P+  R+ ID  +                    + +    E+ + +FDIET
Sbjct: 105 AVIDIYEYDIPFAKRYLIDKGL--------------------IPMEGEEELKLMSFDIET 144

Query: 249 TKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNVN 308
             L  +  +     I+MISY  + +  +I  ++       DL Y           V  V+
Sbjct: 145 --LYHEGEEFGTGPILMISYADENEARVITWKKI------DLPY-----------VEVVS 185

Query: 309 NEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMS-----EELGFQCDK 363
            E E+++ +   ++E  P + +TYNGD FD+ +L+ R    G   +      E   Q   
Sbjct: 186 TEREMIKRFLKVVKEKDPDVLITYNGDNFDFAYLKKRCEKLGVSFTLGRDGSEPKIQRIG 245

Query: 364 NQGECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRF--AKE 421
           ++     K   H D +  ++    LP  +  L+AV +A  G    +V  E++       E
Sbjct: 246 DRFAVEVKGRIHFDLYPVIRHTINLP--TYTLEAVYEAIFGKPKEKVYAEEIATAWETGE 303

Query: 422 KPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAY 481
             + +A YS+ DA  TY L   +  P    L+ +I  S  +V R  +G L E  L+ +AY
Sbjct: 304 GLERVARYSMEDAKVTYELGKEFF-PMEAQLSRLIGQSLWDVSRSSTGNLVEWFLLRKAY 362

Query: 482 KANVICPNKHQSDPEKFYRNHLLESETYIGGHVECLESGVFRSDLPTSFK-LDPS 535
           + N + PNK   D  +  R        Y GG+V+  E G++ + +   F+ L PS
Sbjct: 363 ERNELAPNK--PDERELARRR----GGYAGGYVKEPERGLWDNIVYLDFRSLYPS 411


>gi|436495|gb|AAA67131.1| DNA polymerase [Pyrococcus sp.]
          Length = 775

 Score = 86.7 bits (213), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 91/355 (25%), Positives = 153/355 (43%), Gaps = 55/355 (15%)

Query: 189 CIVDLREYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLLEKRVDLLQRAEVHVCAFDIET 248
            ++D+ EYD+P+  R+ ID  +                    + +    E+ + AFDIET
Sbjct: 105 AVIDIFEYDIPFAKRYLIDKGL--------------------IPMEGDEELKLLAFDIET 144

Query: 249 TKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNVN 308
             L  +  +     I+MISY  + +  +I  ++       DL Y           V  V+
Sbjct: 145 --LYHEGEEFAKGPIIMISYADEEEAKVITWKKI------DLPY-----------VEVVS 185

Query: 309 NEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKM-----SEELGFQCDK 363
           +E E+++ +   ++E  P + +TYNGD FD P+L  RA   G K+       E   Q   
Sbjct: 186 SEREMIKRFLKVIREKDPDVIITYNGDSFDLPYLVKRAEKLGIKLPLGRDGSEPKMQRLG 245

Query: 364 NQGECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRF--AKE 421
           +      K   H D +  ++R   LP  +  L+AV +A  G    +V   ++       +
Sbjct: 246 DMTAVEIKGRIHFDLYHVIRRTINLP--TYTLEAVYEAIFGKPKEKVYAHEIAEAWETGK 303

Query: 422 KPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAY 481
             + +A YS+ DA  TY L   +  P    L+ ++     +V R  +G L E  L+ +AY
Sbjct: 304 GLERVAKYSMEDAKVTYELGREFF-PMEAQLSRLVGQPLWDVSRSSTGNLVEWYLLRKAY 362

Query: 482 KANVICPNKHQSDPEKFYRNHLLESETYIGGHVECLESGVFRSDLPTSFK-LDPS 535
           + N + PNK                E+Y GG+V+  E G++   +   F+ L PS
Sbjct: 363 ERNELAPNKPDER-----EYERRLRESYAGGYVKEPEKGLWEGLVSLDFRSLYPS 412



 Score = 54.7 bits (130), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 75/296 (25%), Positives = 120/296 (40%), Gaps = 60/296 (20%)

Query: 770  LYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARL-LIEKIG-KPL 827
            + D  Q A K + NS+YGY     ARWY  E A  VT  G + I+  R  L EK G K L
Sbjct: 479  MLDYRQRAIKILANSYYGYYGYAKARWYCKECAESVTAWGREYIEFVRKELEEKFGFKVL 538

Query: 828  ELDTDGIWCVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVS 887
             +DTDG++  +PG+ PE    K  +    +    P ++                      
Sbjct: 539  YIDTDGLYATIPGAKPEEIKKKALEFVDYINAKLPGLL---------------------- 576

Query: 888  KTYETHSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGE 947
                       E E +G Y             + KK+YA+ +++G +   +G EI RR  
Sbjct: 577  -----------ELEYEGFYVRGFF--------VTKKKYALIDEEGKII-TRGLEIVRRDW 616

Query: 948  LKLIKVFQAELFDKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESST 1007
             ++ K  QA++ +  L    +EE    V  V  +          +I   +L+ Y      
Sbjct: 617  SEIAKETQAKVLEAILKHGNVEEAVKIVKEVTEKL------SKYEIPPEKLVIY----EQ 666

Query: 1008 MSKSLADYGEQKSCAVTTARRLSDFLGDTMVKDKGLRCQYIVACEPQGTPVSERAV 1063
            +++ L +Y +     V  A+RL+      +    G+   YIV       P+S+RA+
Sbjct: 667  ITRPLHEY-KAIGPHVAVAKRLA---ARGVKVRPGMVIGYIVLR--GDGPISKRAI 716


>gi|313222970|emb|CBY41864.1| unnamed protein product [Oikopleura dioica]
          Length = 179

 Score = 86.7 bits (213), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 46/159 (28%), Positives = 83/159 (52%), Gaps = 5/159 (3%)

Query: 1827 NVQHDVLVMRKNLLKYVRVREFAPEAEFRDPCPSFILPNVICSYCNDCRDLDLCRDMALL 1886
             V  ++  +R+N+ + + V EF+ + ++ DP    IL +V+C+ C   +DLDL  D   L
Sbjct: 7    TVSEELQSLRRNVFRLLGVSEFSEKGQWVDPAAKLILKDVVCTQCGVSQDLDLSVD---L 63

Query: 1887 AQDWHCAMPQCGQPYDREVMENALLQIVRQRERLYHLQDLVCIRCNQVKAAHLAEQCACA 1946
              D  C      +   + ++E  L++ ++++   ++LQD+VC+RCNQV+   +   C CA
Sbjct: 64   NPDCECEFFD--EKTHKRIIEARLIEELKKKVIGWNLQDVVCMRCNQVRHGDMGHLCECA 121

Query: 1947 GSFRCKEDASDFRSKMQIFLNIANRQGFQLLQECTSWIL 1985
            G F+C E+  D ++  +    +A       L     WIL
Sbjct: 122  GRFKCIENGKDLQTYFRTIRQLAAFYKMNHLSSTMDWIL 160


>gi|312137127|ref|YP_004004464.1| replicative DNA polymerase i [Methanothermus fervidus DSM 2088]
 gi|311224846|gb|ADP77702.1| replicative DNA polymerase I [Methanothermus fervidus DSM 2088]
          Length = 581

 Score = 85.9 bits (211), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 114/474 (24%), Positives = 198/474 (41%), Gaps = 94/474 (19%)

Query: 84  FRPYFYAATKEKMEMDVEAYLRRRYESQIADIEILEKEDLDLKNHLSGLHKSYLKISFDT 143
           F+PY Y   K     D+E    +  +  + +I+++EK DL       G     LK+ F  
Sbjct: 36  FKPYIYVIPK-----DIEKCKEKLEKFDVEEIKVIEKRDL-------GKKIKVLKVVFLH 83

Query: 144 VQQLMDVKKDLLHVVERNQAKFDAAEAYESILTGKREQRPQDFLDCIVDLREYDVPYHIR 203
            Q++  V+  +                                L+ + ++REYD+P++ R
Sbjct: 84  PQEVPKVRDKIRK------------------------------LNEVKEIREYDIPFYRR 113

Query: 204 FAIDND-------VRCGQWY---DVSISSTGPLLEKRVDLLQRA--EVHVCAFDIETTKL 251
           + IDN+       +  G+ Y   DV+       LEK   +L+    +  + AFDIE    
Sbjct: 114 YLIDNNLFPMSKIIAEGKEYKRGDVTFIE----LEKPPKVLKDVYHDYKILAFDIEVRN- 168

Query: 252 PLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNVNNEI 311
           P   P  + D I+MIS + +     +I+ E    +                 V  V+NE 
Sbjct: 169 PKGMPRPEKDEIIMISIVGNSGIKKVISSEGSTLNF----------------VEEVSNEK 212

Query: 312 ELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKM-----SEELGFQCDKNQG 366
           E+L  +   ++   P I + YN D FD+P++  RA   G K+       E+ F       
Sbjct: 213 EILERFKEIVKSENPDIIIGYNSDNFDFPYIRDRARKLGIKLDLGVDGSEIKFVRRGFST 272

Query: 367 ECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYD-PLEVNPEDMVRF--AKEKP 423
               K   H+D + WV R  Y+   +  L+ V     G +  L +  +++ ++  + EK 
Sbjct: 273 AAMIKGILHVDLY-WVIR-QYIRLDTYTLERVYYELFGEEKKLGIPGDELWKYWDSDEKR 330

Query: 424 QMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKA 483
             +  YS+ DA +TY +    + P I  L  I+     ++ R  +G   E  L+ +A++ 
Sbjct: 331 DELFKYSLDDAESTYKI-AKKILPLILELTRIVGQPLSDIARMTTGQQVEWFLIRKAFER 389

Query: 484 NVICPNK-HQSDPEKFYRNHLLESETYIGGHVECLESGVFRSDLPTSFK-LDPS 535
           N + PNK  +++ E+  R         +GG+V+  E G+    +   FK L PS
Sbjct: 390 NELVPNKPSKAELEERKRRRP------VGGYVKEPEKGLHEDLVQFDFKSLYPS 437


>gi|402550496|pdb|4FLT|A Chain A, Pyrococcus Abyssi B Family Dna Polymerase Bound To A
           Dsdna, In Edition Mode
 gi|402550499|pdb|4FLU|A Chain A, Pyrococcus Abyssi B Family Dna Polymerase Bound To A
           Dsdna, In Edition Mode
 gi|402550502|pdb|4FLV|A Chain A, Pyrococcus Abyssi B Family Dna Polymerase Bound To A
           Dsdna, In Edition Mode
 gi|402550505|pdb|4FLW|A Chain A, Pyrococcus Abyssi B Family Dna Polymerase Bound To A
           Dsdna, In Edition Mode
 gi|402550510|pdb|4FLX|A Chain A, Pyrococcus Abyssi B Family Dna Polymerase Bound To A
           Dsdna, In Edition Mode
 gi|402550513|pdb|4FLY|A Chain A, Pyrococcus Abyssi B Family Dna Polymerase Bound To A
           Dsdna, In Edition Mode
 gi|402550514|pdb|4FLZ|A Chain A, Pyrococcus Abyssi B Family Dna Polymerase Bound To A
           Dsdna, In Edition Mode
 gi|402550519|pdb|4FM0|A Chain A, Pyrococcus Abyssi B Family Dna Polymerase Bound To A
           Dsdna, In Edition Mode
 gi|402550520|pdb|4FM1|A Chain A, Pyrococcus Abyssi B Family Dna Polymerase Bound To A
           Dsdna, In Edition Mode
          Length = 793

 Score = 85.1 bits (209), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 117/492 (23%), Positives = 197/492 (40%), Gaps = 102/492 (20%)

Query: 65  CIDLYFVSQDG-----------STFKSKY--KFRPYFYAATKEKMEMDVEAYLRRRYESQ 111
            ID  ++++DG             FK +Y   FRPY YA  K+   +D    +      +
Sbjct: 24  IIDADYITEDGKPIIRIFKKEKGEFKVEYDRTFRPYIYALLKDDSAIDEVKKITAERHGK 83

Query: 112 IADIEILEKEDLDLKNHLSGLHKSYLKISFDTVQQLMDVKKDLLHVVERNQAKFDAAEAY 171
           I  I  +EK           + K +L    +  +  ++  +D+  + E+ +         
Sbjct: 84  IVRITEVEK-----------VQKKFLGRPIEVWKLYLEHPQDVPAIREKIR--------- 123

Query: 172 ESILTGKREQRPQDFLDCIVDLREYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLLEKRV 231
                    + P      +VD+ EYD+P+  R+ ID  +                     
Sbjct: 124 ---------EHP-----AVVDIFEYDIPFAKRYLIDKGL--------------------T 149

Query: 232 DLLQRAEVHVCAFDIETTKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLE 291
            +    E+   A DIET  L  +  +     I+MISY  D +G  +I  + +     DL 
Sbjct: 150 PMEGNEELTFLAVDIET--LYHEGEEFGKGPIIMISYA-DEEGAKVITWKSI-----DLP 201

Query: 292 YTPKPEFEGYFKVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGF 351
           Y           V  V++E E+++     ++E  P + +TYNGD F +P+L  RA   G 
Sbjct: 202 Y-----------VEVVSSEREMIKRLVKVIREKDPDVIITYNGDNFAFPYLLKRAEKLGI 250

Query: 352 KM-----SEELGFQCDKNQGECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYD 406
           K+     + E   Q   +      K   H D F  ++R   LP  +  L+AV +A  G  
Sbjct: 251 KLPLGRDNSEPKMQRMGDSLAVEIKGRIHFDLFPVIRRTINLP--TYTLEAVYEAIFGKS 308

Query: 407 PLEVNPEDMVRF--AKEKPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVL 464
             +V   ++       +  + +A YS+ DA  T+ L   +  P    LA ++     +V 
Sbjct: 309 KEKVYAHEIAEAWETGKGLERVAKYSMEDAKVTFELGKEF-FPMEAQLARLVGQPVWDVS 367

Query: 465 RKGSGTLCEMLLMVQAYKANVICPNKHQSDPEKFYRNHLLESETYIGGHVECLESGVFRS 524
           R  +G L E  L+ +AY+ N + PNK                E+Y GG+V+  E G++  
Sbjct: 368 RSSTGNLVEWFLLRKAYERNELAPNKPDER-----EYERRLRESYEGGYVKEPEKGLWEG 422

Query: 525 DLPTSFK-LDPS 535
            +   F+ L PS
Sbjct: 423 IVSLDFRSLYPS 434



 Score = 54.3 bits (129), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 76/313 (24%), Positives = 129/313 (41%), Gaps = 61/313 (19%)

Query: 760  KIQEAQDMV--VLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNAR 817
            +++E++D V   L D  Q A K + NS+YGY     ARWY  E A  VT  G + I   R
Sbjct: 489  RMKESKDPVEKKLLDYRQRAIKILANSYYGYYGYAKARWYCKECAESVTAWGRQYIDLVR 548

Query: 818  LLIEKIG-KPLELDTDGIWCVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTN 876
              +E  G K L +DTDG++  +PG+  E    K     + +    P ++           
Sbjct: 549  RELESRGFKVLYIDTDGLYATIPGAKHEEIKEKALKFVEYINSKLPGLL----------- 597

Query: 877  DQYQTLVDPVSKTYETHSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAE 936
                                  E E +G Y             + KK+YA+ +++G +  
Sbjct: 598  ----------------------ELEYEGFYARGFF--------VTKKKYALIDEEGKIV- 626

Query: 937  LKGFEIKRRGELKLIKVFQAELFDKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADS 996
             +G EI RR   ++ K  QA++ +  L    ++E    V  V  +          +I   
Sbjct: 627  TRGLEIVRRDWSEIAKETQAKVLEAILKHGNVDEAVKIVKEVTEKLSKY------EIPPE 680

Query: 997  ELIDYISESSTMSKSLADYGEQKSCAVTTARRLSDFLGDTMVKDKGLRCQYIVACEPQGT 1056
            +L+ Y      +++ L++Y +     V  A+RL+      +    G+   YIV       
Sbjct: 681  KLVIY----EQITRPLSEY-KAIGPHVAVAKRLA---AKGVKVKPGMVIGYIVLR--GDG 730

Query: 1057 PVSERAVPVAIFE 1069
            P+S+RA+ +  F+
Sbjct: 731  PISKRAIAIEEFD 743


>gi|352683087|ref|YP_004893611.1| DNA polymerase II [Thermoproteus tenax Kra 1]
 gi|350275886|emb|CCC82533.1| DNA polymerase II [Thermoproteus tenax Kra 1]
          Length = 785

 Score = 84.3 bits (207), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 91/377 (24%), Positives = 154/377 (40%), Gaps = 62/377 (16%)

Query: 187 LDCIVDLREYDVPYHIRFAIDNDVRCGQWYDVSISSTGPL------LEKR--VDLLQRAE 238
           L  +  + E D+ +++R+ +D  V    W+   +S  G L      L KR    +L++A 
Sbjct: 101 LSGVRGVYEADIRFYMRYMVDTGVVPSAWHVAEVSEEGRLGSLKKYLVKRPPTPILEKAG 160

Query: 239 V----HVCAFDIETTKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTP 294
           V     V AFDIE        PD   D +++ISY  D QG     RE V           
Sbjct: 161 VLPDLRVLAFDIEVYN-ERGTPDPSRDPVIIISYK-DSQG-----REGV----------- 202

Query: 295 KPEFEGYFKVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMS 354
                     ++  ++  L+R +  +++   P I + YN + FDWP+L  RA   G  +S
Sbjct: 203 --------LTSDGRDDRPLIRKFVEYIRSFDPDIILGYNSNGFDWPYLAERARRLGLSLS 254

Query: 355 EELGFQCDKNQGECRAKFACHLDCFAWVKRDSY-----LPQGSQGLKAVTKAKLGYDPLE 409
                  D+  G+ +     H         D Y     +P+    +K + +A   +  + 
Sbjct: 255 ------IDRMGGQPQQSVYGHWSILGRANLDLYNIIEEVPEIK--VKTLDRAAEYFGVMR 306

Query: 410 VNPEDMVRF---------AKEKPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSP 460
            +   ++            K +P ++  YS+ DAV+TY L    + PF+  L+++  +  
Sbjct: 307 RDERVLIPGHRIYEYWDDPKRRP-LLLRYSLEDAVSTYGLGEKLL-PFLIQLSSVSGIPL 364

Query: 461 DEVLRKGSGTLCEMLLMVQAYKANVICPNKHQSDPEKFYRNHLLESETYIGGHVECLESG 520
           D+V     G   E LLM  AY+A  + PN+ +   E +    +LE    I   V  L+  
Sbjct: 365 DQVAAASVGARVEWLLMRYAYRAGEVAPNREERPYEPYKGAIVLEPRPGIYSDVAVLDFT 424

Query: 521 VFRSDLPTSFKLDPSAY 537
                +   + L P  Y
Sbjct: 425 SMYPSIIMRYNLSPDTY 441


>gi|359416035|ref|ZP_09208410.1| DNA-directed DNA polymerase [Candidatus Haloredivivus sp. G17]
 gi|358033617|gb|EHK02147.1| DNA-directed DNA polymerase [Candidatus Haloredivivus sp. G17]
          Length = 440

 Score = 84.3 bits (207), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 90/363 (24%), Positives = 155/363 (42%), Gaps = 48/363 (13%)

Query: 187 LDCIVDLREYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLLEKRVDLLQRAEVH--VCAF 244
           ++ +   RE+D+P++ R+ ID ++R G W  V I       EK V  ++  ++     + 
Sbjct: 1   MESVSHCREFDIPFYRRYLIDKELRPGSW--VEIEGDHQESEKFVSEIEVQDIRPLESSR 58

Query: 245 DIETTKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKV 304
           D++   L       D DI+M   Y    + +    R+ +     DLE+           V
Sbjct: 59  DLQWKSLAFDLEVIDEDIVMASFY---SEKF----RKVLSLKDTDLEF-----------V 100

Query: 305 TNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMS-----EELGF 359
             V ++ E+L  +   +++ K  I + YN D FD+  L  +A   G  ++     E + F
Sbjct: 101 EEVEDQAEMLERFIEIVEDQKADILLGYNTDEFDFDILRDKADETGVTLALGRNGERMKF 160

Query: 360 QCDKNQGECRAKFACHLDCFAWVKRDSYLPQG----SQGLKAVTKAKLGYDPLEVNPEDM 415
                    R K   HLD + +V     L  G    +  L +V +  LG +  +++  +M
Sbjct: 161 NRRGRFKGARIKGRMHLDLYPFVTH--VLAPGIDSETLDLDSVAQEMLGKEKDDLSWSEM 218

Query: 416 VRFAKEKPQM--MASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCE 473
            +  +EK  +   A Y++ D+  TY L    + P I  L+ I  + P +  R   G L E
Sbjct: 219 KQIWREKGDIEKFAEYALKDSELTYQL-GEQISPQILELSKITGLIPFDTCRLTYGQLTE 277

Query: 474 MLLMVQAYKANVICPNKHQSDPEKFYRNHLLESETYIGGHVECLESGV--------FRSD 525
             L+ +AY  N++  N+    P +  R+     + Y GG V   E G+        FRS 
Sbjct: 278 NYLLREAYSRNMLSRNR----PSQKKRSKRDREQAYTGGFVYTPEEGLYDNVAVFDFRSL 333

Query: 526 LPT 528
            PT
Sbjct: 334 YPT 336


>gi|288931848|ref|YP_003435908.1| DNA polymerase Pol2 [Ferroglobus placidus DSM 10642]
 gi|288894096|gb|ADC65633.1| DNA polymerase Pol2 [Ferroglobus placidus DSM 10642]
          Length = 785

 Score = 83.2 bits (204), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 118/516 (22%), Positives = 199/516 (38%), Gaps = 111/516 (21%)

Query: 44  GWLLTFASSSLEDEDTRKVYSCIDLYFVSQDGSTFKS-KYKFRPYFYAATKEKMEMDVEA 102
           GWLL   +  +  ED R V   + L+    DG+TF      F+PYFYA      + D+E 
Sbjct: 3   GWLLD--ADYITAEDGRAV---VRLWCKDFDGNTFVVYDRNFQPYFYAFKNGLSKEDIEK 57

Query: 103 YLRRRYESQIADIEILEKEDLDLKNHLSGLHKSYLKISFDTVQQLMDVKKDLLHVVERNQ 162
            + +  E  I   ++ E     ++  + G      KI     Q +  ++++L  + E   
Sbjct: 58  IVVKSREGVIKPFKVEE-----VRRKVFGKEVEVFKIYAYHPQHVPKLREELKKITE--- 109

Query: 163 AKFDAAEAYESILTGKREQRPQDFLDCIVDLREYDVPYHIRFAIDNDVRCGQWYDVSISS 222
                                         +RE D+P+  R+ ID D+ C       I  
Sbjct: 110 ------------------------------VREADIPFAYRYLIDKDLACMD----GIRV 135

Query: 223 TGPLLEKR------VDLLQRAEV-----HVCAFDIETTKLPLKFPDADYDIIMMISYMLD 271
            G + E+R       + ++R E+      V AFD E     L  PD + D I        
Sbjct: 136 EGKVREERGLKVIDAEHVERFEIPLPEPKVLAFDCEMLT-ELGMPDPEKDKI-------- 186

Query: 272 GQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNVNNEIELLRLWFAHMQEVKPGIYVT 331
               +II  +C                 G F+     NE E+L  +   ++E  P + V 
Sbjct: 187 ----IIIGVKC-----------------GDFEEIITGNEREILLRFVEIIKEQDPDVIVG 225

Query: 332 YNGDYFDWPFLETRAAHHGFKMSEELGFQCDKNQGECRA---KFACHLDCFAWVKRDSYL 388
           YN D FDWP++  RA     K+S +L    D ++   R    K A  L+       D Y 
Sbjct: 226 YNQDNFDWPYIRKRAE----KLSVKLNIGRDGSEISFRGGRPKIAGRLNV------DLYD 275

Query: 389 PQGSQGLKAVTKAKLG------YDPLEVNPEDMV-RFAKEKPQMMASYSVSDAVATYYLY 441
                 +K  T   +        +  ++  +D+  R+     + +  YS  D + TY++ 
Sbjct: 276 IAMKLDVKVKTLENVAEFLGRKVELADIEAKDIYKRWTSGDKESVLKYSKQDVLNTYFIA 335

Query: 442 MTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVICPNKHQSDPEKFYRN 501
              + P  + L+ +I +  D+V R G G   +  L+ +AYK   I PN  + + E +   
Sbjct: 336 EELL-PMHYELSRMIRIPTDDVARIGRGKQVDWFLLSEAYKIGEIAPNPAEVE-ESYEGA 393

Query: 502 HLLESETYIGGHVECLESGVFRSDLPTSFKLDPSAY 537
            +LE    +  +V CL+       +  ++ + P  Y
Sbjct: 394 FVLEPSRGLHKNVVCLDFASMYPSIMIAYNISPDTY 429



 Score = 56.6 bits (135), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 75/302 (24%), Positives = 124/302 (41%), Gaps = 61/302 (20%)

Query: 769  VLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIG-KPL 827
            +L +  Q   K + NSFYGY    GARWY  + A   T  G  +I++A  + +K+G + L
Sbjct: 484  LLLNIKQQTLKILTNSFYGYTGWSGARWYCRQCAEATTAWGRHLIKSAVEIAKKLGFEVL 543

Query: 828  ELDTDGIWCVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVS 887
              DTD I+                   KK  +S                 + + L++ +S
Sbjct: 544  YGDTDSIFV------------------KKGNLSL-----------EKIRGEVEKLIEEIS 574

Query: 888  KTYETHSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGE 947
            + +       ++ EVD  YK +          + KKRYA   +DG L  +KG E++R   
Sbjct: 575  EKF------PVQIEVDEYYKTIFF--------VEKKRYAGLTEDGILV-VKGLEVRRGDW 619

Query: 948  LKLIKVFQAELFDKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESST 1007
             +L K  Q ++ +  L     E+    V  V N      D +   +   +++ Y      
Sbjct: 620  CELAKEVQKKVIEIILKEENPEKAAEYVRKVIN------DIKSGKVKLEDVVIY----KG 669

Query: 1008 MSKSLADYGEQKSCAVTTARRLSDFLGDTMVKDKGLRCQYIVACEPQGTPVSERAVPVAI 1067
            ++K    Y E K   V  A R  +     +V + G +  ++V  E  G  V +RA P+ +
Sbjct: 670  LTKRPDKY-ESKQAHVKAALRAMEL---GIVYNVGSKVGFVV-VEGAGN-VGDRAYPIDL 723

Query: 1068 FE 1069
             E
Sbjct: 724  IE 725


>gi|1495740|emb|CAA90888.1| DNA-dependent DNA polymerase [Pyrococcus abyssi]
          Length = 771

 Score = 83.2 bits (204), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 116/492 (23%), Positives = 194/492 (39%), Gaps = 102/492 (20%)

Query: 65  CIDLYFVSQDG-----------STFKSKY--KFRPYFYAATKEKMEMDVEAYLRRRYESQ 111
            ID  ++++DG             FK +Y   FRPY YA  K+   +D    +      +
Sbjct: 2   IIDADYITEDGKPIIRIFKKEKGEFKVEYDRTFRPYIYALLKDDSAIDEVKKITAERHGK 61

Query: 112 IADIEILEKEDLDLKNHLSGLHKSYLKISFDTVQQLMDVKKDLLHVVERNQAKFDAAEAY 171
           I  I  +EK           + K +L    +  +  ++  +D+  + E+ +         
Sbjct: 62  IVRITEVEK-----------VQKKFLGRPIEVWKLYLEHPQDVPAIREKIR--------- 101

Query: 172 ESILTGKREQRPQDFLDCIVDLREYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLLEKRV 231
                    + P      +VD+ EYD+P+  R+ ID  +                     
Sbjct: 102 ---------EHP-----AVVDIFEYDIPFAKRYLIDKGL--------------------T 127

Query: 232 DLLQRAEVHVCAFDIETTKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLE 291
            +    E+   A DIET  L  +  +     I+MISY  D +G  +I  + +     DL 
Sbjct: 128 PMEGNEELTFLAVDIET--LYHEGEEFGKGPIIMISYA-DEEGAKVITWKSI-----DLP 179

Query: 292 YTPKPEFEGYFKVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGF 351
           Y           V  V++E E+++     ++E  P + +TYNGD FD+P+L  RA   G 
Sbjct: 180 Y-----------VEVVSSEREMIKRLVKVIREKDPDVIITYNGDNFDFPYLLKRAEKLGI 228

Query: 352 KM-----SEELGFQCDKNQGECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYD 406
           K+     + E   Q   +      K   H D F  ++R   LP  +  L+ V +   G  
Sbjct: 229 KLPLGRDNSEPKMQRMGDSLAVEIKGRIHFDLFPAIRRTINLP--TYTLETVYEVIFGKS 286

Query: 407 PLEVNPEDMVRF--AKEKPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVL 464
             +V   ++       +  + +A YS+ DA  T  L   +  P    LA ++     +V 
Sbjct: 287 KEKVYAHEIAEAWETGKGLERVAKYSMEDAKVTSELGKEFF-PMEAQLARLVGHPVWDVS 345

Query: 465 RKGSGTLCEMLLMVQAYKANVICPNKHQSDPEKFYRNHLLESETYIGGHVECLESGVFRS 524
           R  +G L E  L+ +AY+ N + PNK                E+Y GG+V   E G++  
Sbjct: 346 RSSTGNLVEWFLLTKAYERNELAPNKPDER-----EYERRLRESYEGGYVNEPEKGLWEG 400

Query: 525 DLPTSFK-LDPS 535
            +   F+ L PS
Sbjct: 401 IVSLDFRSLYPS 412



 Score = 55.1 bits (131), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 76/313 (24%), Positives = 129/313 (41%), Gaps = 61/313 (19%)

Query: 760  KIQEAQDMV--VLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNAR 817
            +++E++D V   L D  Q A K + NS+YGY     ARWY  E A  VT  G + I   R
Sbjct: 467  RMKESKDPVEKKLLDYRQRAIKILANSYYGYYGYAKARWYCKECAESVTAWGRQYIDLVR 526

Query: 818  LLIEKIG-KPLELDTDGIWCVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTN 876
              +E  G K L +DTDG++  +PG+  E    K     + +    P ++           
Sbjct: 527  RELESRGFKVLYIDTDGLYATIPGAKHEEIKEKALKFVEYINSKLPGLL----------- 575

Query: 877  DQYQTLVDPVSKTYETHSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAE 936
                                  E E +G Y             + KK+YA+ +++G +  
Sbjct: 576  ----------------------ELEYEGFYARGFF--------VTKKKYALIDEEGKIV- 604

Query: 937  LKGFEIKRRGELKLIKVFQAELFDKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADS 996
             +G EI RR   ++ K  QA++ +  L    ++E    V  V  +          +I   
Sbjct: 605  TRGLEIVRRDWSEIAKETQAKVLEAILKHGNVDEAVKIVKEVTEKL------SKYEIPPE 658

Query: 997  ELIDYISESSTMSKSLADYGEQKSCAVTTARRLSDFLGDTMVKDKGLRCQYIVACEPQGT 1056
            +L+ Y      +++ L++Y +     V  A+RL+      +    G+   YIV       
Sbjct: 659  KLVIY----EQITRPLSEY-KAIGPHVAVAKRLA---AKGVKVKPGMVIGYIVLX--GDG 708

Query: 1057 PVSERAVPVAIFE 1069
            P+S+RA+ +  F+
Sbjct: 709  PISKRAIAIEEFD 721


>gi|402550525|pdb|4FM2|A Chain A, Pyrococcus Abyssi B Family Dna Polymerase (Triple Mutant)
           Bound To A Dsdna, In Edition Mode
          Length = 793

 Score = 82.0 bits (201), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 93/355 (26%), Positives = 150/355 (42%), Gaps = 55/355 (15%)

Query: 189 CIVDLREYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLLEKRVDLLQRAEVHVCAFDIET 248
            +VD+ EYD+P+  R+ ID  +                      +    E+   A DIET
Sbjct: 127 AVVDIFEYDIPFAKRYLIDKGL--------------------TPMEGNEELTFLAVDIET 166

Query: 249 TKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNVN 308
             L  +  +     I+MISY  D +G  +I  + +     DL Y           V  V+
Sbjct: 167 --LYHEGEEFGKGPIIMISYA-DEEGAKVITWKSI-----DLPY-----------VEVVS 207

Query: 309 NEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKM-----SEELGFQCDK 363
           +E E+++     ++E  P + +TYNGD F +P+L  RA   G K+     + E   Q   
Sbjct: 208 SEREMIKRLVKVIREKDPDVIITYNGDNFAFPYLLKRAEKLGIKLPLGRDNSEPKMQRMG 267

Query: 364 NQGECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRF--AKE 421
           +      K   H D F  ++R   LP  +  L+AV +A  G    +V   ++       +
Sbjct: 268 DSLAVAIKGRIHFDLFPVIRRTINLP--TYTLEAVYEAIFGKSKEKVYAHEIAEAWETGK 325

Query: 422 KPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAY 481
             + +A YS+ DA  T+ L   +  P    LA ++      V R  +G L E  L+ +AY
Sbjct: 326 GLERVAKYSMEDAKVTFELGKEF-FPMEAQLARLVGQPVWAVSRSSTGNLVEWFLLRKAY 384

Query: 482 KANVICPNKHQSDPEKFYRNHLLESETYIGGHVECLESGVFRSDLPTSFK-LDPS 535
           + N + PNK                E+Y GG+V+  E G++   +   F+ L PS
Sbjct: 385 ERNELAPNKPDER-----EYERRLRESYEGGYVKEPEKGLWEGIVSLDFRSLYPS 434



 Score = 53.9 bits (128), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 76/313 (24%), Positives = 129/313 (41%), Gaps = 61/313 (19%)

Query: 760  KIQEAQDMV--VLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNAR 817
            +++E++D V   L D  Q A K + NS+YGY     ARWY  E A  VT  G + I   R
Sbjct: 489  RMKESKDPVEKKLLDYRQRAIKILANSYYGYYGYAKARWYCKECAESVTAWGRQYIDLVR 548

Query: 818  LLIEKIG-KPLELDTDGIWCVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTN 876
              +E  G K L +DTDG++  +PG+  E    K     + +    P ++           
Sbjct: 549  RELESRGFKVLYIDTDGLYATIPGAKHEEIKEKALKFVEYINSKLPGLL----------- 597

Query: 877  DQYQTLVDPVSKTYETHSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAE 936
                                  E E +G Y             + KK+YA+ +++G +  
Sbjct: 598  ----------------------ELEYEGFYARGFF--------VTKKKYALIDEEGKIV- 626

Query: 937  LKGFEIKRRGELKLIKVFQAELFDKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADS 996
             +G EI RR   ++ K  QA++ +  L    ++E    V  V  +          +I   
Sbjct: 627  TRGLEIVRRDWSEIAKETQAKVLEAILKHGNVDEAVKIVKEVTEKLSKY------EIPPE 680

Query: 997  ELIDYISESSTMSKSLADYGEQKSCAVTTARRLSDFLGDTMVKDKGLRCQYIVACEPQGT 1056
            +L+ Y      +++ L++Y +     V  A+RL+      +    G+   YIV       
Sbjct: 681  KLVIY----EQITRPLSEY-KAIGPHVAVAKRLA---AKGVKVKPGMVIGYIVLR--GDG 730

Query: 1057 PVSERAVPVAIFE 1069
            P+S+RA+ +  F+
Sbjct: 731  PISKRAIAIEEFD 743


>gi|333988438|ref|YP_004521045.1| DNA polymerase B region [Methanobacterium sp. SWAN-1]
 gi|333826582|gb|AEG19244.1| DNA polymerase B region [Methanobacterium sp. SWAN-1]
          Length = 596

 Score = 81.6 bits (200), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 89/370 (24%), Positives = 155/370 (41%), Gaps = 48/370 (12%)

Query: 187 LDCIVDLREYDVPYHIRFAIDN----------DVRCGQWYDVSISSTGPLL------EKR 230
           L+ + D+RE+D+P++ R+ +D           D +C    DV  S    +       E R
Sbjct: 105 LESVEDIREHDIPFYRRYLVDKGIFPMSEVEVDGKCLTGNDVKFSCEEDVCIFQMEGEPR 164

Query: 231 VDLLQRAEVHVCAFDIETTKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDL 290
               +  E+ + +FDIE    P   P A+ D I+MIS +   QG            +E +
Sbjct: 165 PLESEFPELKILSFDIEVRN-PKGMPQAEVDEIIMIS-LSSNQG------------LEKV 210

Query: 291 EYTPKPEFEGYFKVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHG 350
             T K   +    V  V  E  +L  +   ++   P + + YN D FD P++  RAA  G
Sbjct: 211 ISTAKSSLDF---VETVKTEARMLERFVEIVKSENPDLLIGYNSDNFDMPYIRDRAAKLG 267

Query: 351 FKM-----SEELGFQCDKNQGECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGY 405
            K+       +L F           K   H+D +  ++R  YL      L+ V +   G 
Sbjct: 268 VKLKLGTDGSQLKFMRRGFANAGLVKGRIHVDLYLLMRR--YLTLDRYTLERVYRELFGE 325

Query: 406 DPLEVNPEDMVRF---AKEKPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDE 462
           +  ++  +++  +     +K +M+ +YS+ DAVA   +    + P    L  I+     +
Sbjct: 326 EKRDIPGDEIFEYWDDGGKKLEMLFNYSLDDAVAVTKIGEKML-PLSLELTRIVGQPFFD 384

Query: 463 VLRKGSGTLCEMLLMVQAYKANVICPNKHQSDPEKFYRNHLLESETYIGGHVECLESGV- 521
           + R  +G + E  L+ +AY+   + PNK  S      R+    +  Y+   V+ L   + 
Sbjct: 385 IARMTTGQMVEWYLIRKAYEYGDMVPNKPSSSQYSQRRHKKRIAGGYVKDPVKGLHENIV 444

Query: 522 ---FRSDLPT 528
              FRS  P+
Sbjct: 445 SFDFRSLYPS 454


>gi|424813626|ref|ZP_18238814.1| DNA polymerase elongation subunit, family B [Candidatus Nanosalina
           sp. J07AB43]
 gi|339758572|gb|EGQ43827.1| DNA polymerase elongation subunit, family B [Candidatus Nanosalina
           sp. J07AB43]
          Length = 873

 Score = 81.3 bits (199), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 89/359 (24%), Positives = 158/359 (44%), Gaps = 40/359 (11%)

Query: 187 LDCIVDLREYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLLEKRVDLLQRAEVHVCAFDI 246
           L+ +   RE+D+P++ R+ ID  +   Q    ++   G  LE        +E      D+
Sbjct: 21  LEEVSGCREFDIPFYKRYLIDKQILPTQ----TVVLKGEELE--------SENFDVKIDV 68

Query: 247 ETTKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTN 306
           E T   ++  + D   +  +S+ L+     +I     G++++ +  T   + E    V +
Sbjct: 69  EDTNTDVELAEPD---LTSVSFDLEVIDDTVIMASFYGKNVKKVVSTKDIDREF---VES 122

Query: 307 VNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMS-----EELGFQC 361
           V +E  LL+     +QE+   +   YN D FD+  L  R   H  ++S     E + F  
Sbjct: 123 VGSEKALLQRLIELVQELDVDVLTGYNTDEFDFQVLRERVEEHSMELSLGRDGERMKFNR 182

Query: 362 DKNQGECRAKFACHLDCFAWVKR--DSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRF- 418
                  R K   HLD + +V+      L      L +V++  LG +  +V+ E+M ++ 
Sbjct: 183 RGRFSGARLKGRMHLDLYPFVEHVVSPGLESERLDLDSVSEEMLGENKDDVSFEEMKKWW 242

Query: 419 -AKEKPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLM 477
             +E  + +ASY++ D+   + L    V P +  L+ I  + P +  R   G L E  L+
Sbjct: 243 RNEENLEELASYALKDSELAFKLSNEMV-PQMLELSKITGLIPFDACRLTYGQLTENFLL 301

Query: 478 VQAYKANVICPNKHQSDPEKFYRNHLLESETYIGGHVECLESGV--------FRSDLPT 528
            +A K N++ PN+   + ++  +N       Y GG V   ESG+        FRS  PT
Sbjct: 302 KEAAKKNMLSPNRPTRNTQRRRQNQ----GAYEGGFVYTPESGLYDDISVFDFRSLYPT 356



 Score = 55.8 bits (133), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 37/102 (36%), Positives = 51/102 (50%), Gaps = 16/102 (15%)

Query: 715 GICMRENSFYVDTVRSFRDRRYEYKGLNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSL 774
           G C     F+ + ++   + RYE KG  K    KL E     +SI+ +       +Y S 
Sbjct: 385 GFCQDNQGFFPELIQGLVESRYEIKGEMK----KLDE-----DSIEYER------IY-SR 428

Query: 775 QLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNA 816
           Q A K + NSFYGY+   GARWYS E A   T+ G K I++ 
Sbjct: 429 QQAQKVLANSFYGYLGYNGARWYSKECAQATTFMGRKYIEDT 470


>gi|304315331|ref|YP_003850478.1| DNA polymerase [Methanothermobacter marburgensis str. Marburg]
 gi|302588790|gb|ADL59165.1| DNA polymerase [Methanothermobacter marburgensis str. Marburg]
          Length = 589

 Score = 80.9 bits (198), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 122/540 (22%), Positives = 222/540 (41%), Gaps = 102/540 (18%)

Query: 84  FRPYFYAATKEKMEMDVEAYLRRRYESQIADIEILEKEDLDLKNHLSGLHKSYLKISFDT 143
           FRPY YA     + +D E  L    E  +  +E+ E+ DL       G     ++I F  
Sbjct: 42  FRPYIYA-----IPIDTERCLDDLAELGLEKLEVTERRDL-------GKPVEVIRIEFRH 89

Query: 144 VQQLMDVKKDLLHVVERNQAKFDAAEAYESILTGKREQRPQDFLDCIVDLREYDVPYHIR 203
            Q++  ++  +     RN                         L+ + D+RE+D+P++ R
Sbjct: 90  PQEVPKLRDRI-----RN-------------------------LESVADIREHDIPFYRR 119

Query: 204 FAIDNDV--RCGQWYD-------VSISSTGPLLEKRVDLLQRA-----EVHVCAFDIETT 249
           + ID  +    G  ++        SI+S    + +  D +Q +     ++ + +FDIE  
Sbjct: 120 YLIDRSIVPMAGIEFNGVEAESASSITSDDVRIIEITDGIQTSDSGFPQLDILSFDIEV- 178

Query: 250 KLPLKFPDADYDIIMMISYMLD-GQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNVN 308
           + P   PD + D I+M+    + G   +I  R   GE ++ +E               V 
Sbjct: 179 RNPHGMPDPENDEIVMVGIAGNMGVESVISTR---GEHLDFVE--------------RVG 221

Query: 309 NEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDKNQGEC 368
           +E  +L  +   ++E KP I V YN D FD+P+L  RA   G ++  +LG+   + +   
Sbjct: 222 DEAAILERFAEIVREKKPDILVGYNSDNFDFPYLSRRAEILGVEL--DLGWDGSRIKTMR 279

Query: 369 RA-------KFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRF--A 419
           R        K   H+D +  ++R  Y+      L+ V +   G + L++  + +  +   
Sbjct: 280 RGFANATAIKGTVHVDLYPVMRR--YMNLDRYTLERVYQELFGEEKLDLPGDKLWEYWDR 337

Query: 420 KEKPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQ 479
           +E    +  YS+ D VATY +    + P    L  I+     ++ R  +G   E  L+ +
Sbjct: 338 EELRDELFRYSLDDVVATYRI-AEKILPLNMELTRIVGQPLFDISRMATGQQAEWFLVRK 396

Query: 480 AYKANVICPNKHQSDPEKFYRNHLLESETYIGGHVECLESGV--------FRSDLPTSFK 531
           AY+   + PNK      +F +         +GG+V+  E G+        FRS  P+   
Sbjct: 397 AYQYGELVPNKPSH--SEFSKRR---GRRAVGGYVKEPERGLHENIVQFDFRSLYPSIII 451

Query: 532 LDPSAYEQLLNNLDRDLQYAIKVEGKMDLESVSNYDEVKNAIMEKLLRLQEEPIREECPL 591
               + + L +  D D   A +   +   E       V   I+ + +R++ E  R + P+
Sbjct: 452 SKNISPDTLTDEKDCDCHVAPEYGYRFRKEPAGFVPSVIGEILSERVRIKGEMKRSDDPM 511


>gi|68064761|ref|XP_674364.1| hypothetical protein [Plasmodium berghei strain ANKA]
 gi|56492885|emb|CAI04178.1| hypothetical protein PB001304.00.0 [Plasmodium berghei]
          Length = 384

 Score = 80.1 bits (196), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 43/102 (42%), Positives = 63/102 (61%), Gaps = 4/102 (3%)

Query: 183 PQDFLDCIVDLREYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLLEK-RVDLLQR---AE 238
            ++ +  +V+L EYDV Y  R  ID ++RCG WY V+        E+   ++L++   A 
Sbjct: 282 KEEIMSEMVELYEYDVKYTTRLCIDKNIRCGLWYKVTRLEDEIYTEQIYFEVLKKEILAP 341

Query: 239 VHVCAFDIETTKLPLKFPDADYDIIMMISYMLDGQGYLIINR 280
           ++V A+DIE  K  LKFPD + D I+ ISYM + QGYLI+NR
Sbjct: 342 LNVLAWDIECYKDELKFPDKEKDEIISISYMYNAQGYLIVNR 383



 Score = 59.3 bits (142), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 43/159 (27%), Positives = 82/159 (51%), Gaps = 14/159 (8%)

Query: 17  QKLIRSAEEELEAKLGYDLFSEGDKRLGWLLTFASSSL----EDEDTRKVYSCIDLYFVS 72
           +KLI+     LE K     + +  ++ G+L     +++    +D    +  + + +YFVS
Sbjct: 23  EKLIK-----LENKFKIKTWIDKGEKEGYLYNIVPTTMSVLVKDSTKTQKKTGVHMYFVS 77

Query: 73  QDGSTFKSKYKFRPYFYAATKEKMEMD-VEAYLRRRYESQIADIEILEKEDLDLKNHL-- 129
            +  T++    +RPYFY  TK     + V  +L++       +IE ++K+D+ L +HL  
Sbjct: 78  DNNKTWRLTLFYRPYFYLKTKNIYNYESVSNFLKKELGKYNVEIEFVKKDDISLFDHLNK 137

Query: 130 --SGLHKSYLKISFDTVQQLMDVKKDLLHVVERNQAKFD 166
             S L+  + K+SFDT++ L+  +  L  ++ERN+   D
Sbjct: 138 KRSYLNNIFFKLSFDTIENLVRSRSFLERIIERNKKSKD 176


>gi|148643101|ref|YP_001273614.1| DNA-dependent DNA polymerase I, PolB1 [Methanobrevibacter smithii
           ATCC 35061]
 gi|261350101|ref|ZP_05975518.1| DNA polymerase [Methanobrevibacter smithii DSM 2374]
 gi|148552118|gb|ABQ87246.1| DNA-dependent DNA polymerase I, PolB1 [Methanobrevibacter smithii
           ATCC 35061]
 gi|288860887|gb|EFC93185.1| DNA polymerase [Methanobrevibacter smithii DSM 2374]
          Length = 595

 Score = 79.0 bits (193), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 84/333 (25%), Positives = 143/333 (42%), Gaps = 51/333 (15%)

Query: 187 LDCIVDLREYDVPYHIRFAIDNDV-------RCGQW-----------YDVSISSTGPLLE 228
           LD +  +RE+D+P++ R+ ID DV        CG+            +D+ I      LE
Sbjct: 102 LDSVDHIREHDIPFYRRYLIDRDVIPMTEVKACGEKIDSFLNLDSKKHDLEIIKLTKPLE 161

Query: 229 KRVDLLQRAEVHVCAFDIETTKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIE 288
           +  D LQ  +  + +FD+E    P   P+++ D I+MI    +     +I+ +   ED +
Sbjct: 162 RVNDDLQ--DFRILSFDLEVRN-PHGMPNSEVDEIIMIGVASNFGINQVISTKTNSEDRD 218

Query: 289 DLEYTPKPEFEGYFKVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAH 348
           D              V  V +E E++  +   +++    I V YN D FD P+L+ RA  
Sbjct: 219 DF-------------VNQVESEKEMIETFIDIVKKSNVDIIVGYNSDNFDLPYLKDRAKL 265

Query: 349 HGFKMSEELGFQCDKNQGECRAKFA--------CHLDCFAWVKRDSYLPQGSQGLKAVTK 400
           +G ++  +LG   D N    R  FA         H+D +  ++R  Y+      L+ V  
Sbjct: 266 YGLEL--DLGMD-DSNIKFIRRGFANAASFKGLIHVDLYLVMRR--YMTLERYTLERVYY 320

Query: 401 AKLGYDPLEVNPEDMVRFAKEKPQMMA---SYSVSDAVATYYLYMTYVHPFIFSLATIIP 457
              G + ++V  E +  +       +     YS+ D V+T  +    + P    L  I+ 
Sbjct: 321 ELFGEEKIDVPGEHIWEYWDSDSTELDDLFDYSLDDVVSTLKIAQQTL-PLNLELTRIVG 379

Query: 458 MSPDEVLRKGSGTLCEMLLMVQAYKANVICPNK 490
               ++ R  +G   E  L+ +AY  N I PNK
Sbjct: 380 QPLFDLSRMATGQQAEWFLVKEAYFDNEIVPNK 412


>gi|11498108|ref|NP_069333.1| DNA polymerase B1 [Archaeoglobus fulgidus DSM 4304]
 gi|3122019|sp|O29753.1|DPOL_ARCFU RecName: Full=DNA polymerase
 gi|2650130|gb|AAB90741.1| DNA polymerase B1 (polB) [Archaeoglobus fulgidus DSM 4304]
          Length = 781

 Score = 78.6 bits (192), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 77/364 (21%), Positives = 150/364 (41%), Gaps = 43/364 (11%)

Query: 184 QDFLDCIVDLREYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLLE-------KRVDLLQR 236
           +D+L    D+RE D+P+  R+ ID D+ C     +     G ++        +R+  ++ 
Sbjct: 100 RDYLSQFGDVREADIPFAYRYLIDKDLACMDGIAIEGEKQGGVIRSYKIEKVERIPRMEF 159

Query: 237 AEVHVCAFDIETTKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKP 296
            E+ +  FD E        P+ + D I++IS   +    +I+                  
Sbjct: 160 PELKMLVFDCEMLS-SFGMPEPEKDPIIVISVKTNDDDEIILT----------------- 201

Query: 297 EFEGYFKVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMS-E 355
                       +E +++  +   ++   P I V YN D FDWP+L  RA      +   
Sbjct: 202 -----------GDERKIISDFVKLIKSYDPDIIVGYNQDAFDWPYLRKRAERWNIPLDVG 250

Query: 356 ELGFQCDKNQGECRAKFACHLDCFAWVKRDSYLP-QGSQGLKAVTKAKLGYDPLEVNPED 414
             G       G  +     ++D +    R S +  +  + +      K+  +  ++  +D
Sbjct: 251 RDGSNVVFRGGRPKITGRLNVDLYDIAMRISDIKIKKLENVAEFLGTKI--EIADIEAKD 308

Query: 415 MVRF-AKEKPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCE 473
           + R+ ++ + + + +Y+  DA+ TY L    + P  + L+ +I +  D+V R G G   +
Sbjct: 309 IYRYWSRGEKEKVLNYARQDAINTY-LIAKELLPMHYELSKMIRLPVDDVTRMGRGKQVD 367

Query: 474 MLLMVQAYKANVICPNKHQSDPEKFYRNHLLESETYIGGHVECLESGVFRSDLPTSFKLD 533
            LL+ +A K   I PN  +   E +    +LE E  +  +V CL+       +  +F + 
Sbjct: 368 WLLLSEAKKIGEIAPNPPEH-AESYEGAFVLEPERGLHENVACLDFASMYPSIMIAFNIS 426

Query: 534 PSAY 537
           P  Y
Sbjct: 427 PDTY 430



 Score = 57.8 bits (138), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 63/213 (29%), Positives = 83/213 (38%), Gaps = 49/213 (23%)

Query: 770 LYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIG-KPLE 828
           L D  Q   K + NSFYGY+    ARWY    A   T  G   I+ +  + E +G K L 
Sbjct: 484 LLDIKQQTLKVLTNSFYGYMGWNLARWYCHPCAEATTAWGRHFIRTSAKIAESMGFKVLY 543

Query: 829 LDTDGIWCVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSK 888
            DTD I+    G                        M   DV R         L+D +  
Sbjct: 544 GDTDSIFVTKAG------------------------MTKEDVDR---------LIDKL-- 568

Query: 889 TYETHSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGEL 948
               H E  I+ EVD  Y A+          + KKRYA   +DG L  +KG E++R    
Sbjct: 569 ----HEELPIQIEVDEYYSAIFF--------VEKKRYAGLTEDGRLV-VKGLEVRRGDWC 615

Query: 949 KLIKVFQAELFDKFLHGSTIEECYSAVAAVANR 981
           +L K  Q E+ +  L     E+  S V  V  R
Sbjct: 616 ELAKKVQREVIEVILKEKNPEKALSLVKDVILR 648


>gi|159904917|ref|YP_001548579.1| DNA polymerase Pol2 [Methanococcus maripaludis C6]
 gi|159886410|gb|ABX01347.1| DNA polymerase Pol2 [Methanococcus maripaludis C6]
          Length = 781

 Score = 78.6 bits (192), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 87/345 (25%), Positives = 149/345 (43%), Gaps = 46/345 (13%)

Query: 193 LREYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLLEKRVDLLQRAEVHVCAFDIETTKLP 252
           L EYD+P+  R+ IDN V     +D        L++ ++      E    +FDIE     
Sbjct: 109 LYEYDIPFIRRYMIDNKVIPTSNWDFK---NNKLIDNKI-----PEFKTVSFDIEV--YC 158

Query: 253 LKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNVNNEIE 312
            K PD   D I+M S+   G   ++  ++    D + LEY              V +E E
Sbjct: 159 HKGPDPKKDPIIMASFSSKGHNVVVSTKKF---DHDKLEY--------------VKDEKE 201

Query: 313 LLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDK---NQGECR 369
           L++     +++    I  TYNGD FD+P+L+ RA   G ++  +LG   +K    +G   
Sbjct: 202 LIKRIIEILKDY--DIIYTYNGDNFDFPYLKKRAEVFGLEL--KLGKNDEKIKITKGGMN 257

Query: 370 AKF----ACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQM 425
           +K       H+D +   +R   L      L+ VT+A      ++V  E++ +   +  + 
Sbjct: 258 SKSYIPGRVHIDLYPIARR--LLNLTKYRLENVTEALFDVKKVDVGHENIPKMWDKLDET 315

Query: 426 MASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANV 485
           +  YS  DA  T  +   ++ P     + ++  S  ++ R  S  + E LL+  +Y   V
Sbjct: 316 LVEYSYQDAYYTQRIGEQFL-PLEIMFSRVVNQSLYDINRMSSSQMVEYLLLKNSYNKGV 374

Query: 486 ICPNKHQSDPEKFYRNHLLESETYIGGHVECLESGVFRSDLPTSF 530
           I PN+      K Y+  +  S  Y GG+V+    G+    +   F
Sbjct: 375 IAPNRPSG---KEYQKRIRSS--YEGGYVKEPIKGIHEDIVSMDF 414



 Score = 47.4 bits (111), Expect = 0.099,   Method: Compositional matrix adjust.
 Identities = 70/300 (23%), Positives = 113/300 (37%), Gaps = 62/300 (20%)

Query: 770  LYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIG-KPLE 828
            + D  Q + K + NS YGY+    ARWYS + A + T+ G + IQ      E  G K + 
Sbjct: 492  ILDYEQRSIKVLANSHYGYLAFPMARWYSRDCAEITTHLGRQYIQKTIEEAENFGFKVIY 551

Query: 829  LDTDGI---WCVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDP 885
             DTDG    W        +    KTK   K +    P  M                    
Sbjct: 552  ADTDGFYSKWANGEKLTKDELLEKTKTFLKTINDKLPGEM-------------------- 591

Query: 886  VSKTYETHSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRR 945
                         E E +G +K  I         + KK+YA+ +++  +  +KG E+ RR
Sbjct: 592  -------------ELEFEGYFKRGIF--------VTKKKYALIDENEKIT-VKGLEVVRR 629

Query: 946  GELKLIKVFQAELFDKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISES 1005
                + K  Q  + +  L    +E     +        D     GK   +  LI      
Sbjct: 630  DWSNVSKNTQKSVLNALLKEGNVENAKKVIQDTIKELKD-----GKVNKEDLLI-----H 679

Query: 1006 STMSKSLADYGEQKSCAVTTARRLSDFLGDTMVKDKGLRCQYIVACEPQGTPVSERAVPV 1065
            + ++K + DY +  S  V  A+++    G+ +  + G    YI+    +   +SERA P+
Sbjct: 680  TQLTKRIEDY-KTTSPHVEVAKKIMKS-GNRV--NTGDVISYIITSGNKS--ISERAEPI 733


>gi|260819552|ref|XP_002605100.1| hypothetical protein BRAFLDRAFT_84230 [Branchiostoma floridae]
 gi|229290431|gb|EEN61110.1| hypothetical protein BRAFLDRAFT_84230 [Branchiostoma floridae]
          Length = 579

 Score = 78.2 bits (191), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 66/257 (25%), Positives = 116/257 (45%), Gaps = 36/257 (14%)

Query: 1177 NVEDLEDFPKKRRNSVNGPRPIVRCFEVNNEQKTVKTTDQVDSLRQQLEPSEVSDQQPSS 1236
            ++ D+ED    R  + NG         V+N++K     D+V   ++ LE ++   +    
Sbjct: 19   DIADMEDMAGPR-TATNG-----LTVAVSNKRKRDSGEDRVGQSQEDLELTQSWREILGP 72

Query: 1237 QNAIDTENIDRIVDYKGWLELKKRKWKDNLDRRKKQKLGSLRASHQANGVSESLGDMINH 1296
               +     +++     WL+  KRKWK    +R  +K    R         E+ G +I  
Sbjct: 73   PPPLGNTKEEKL----KWLDYHKRKWKLQAKQRDARKRQDKRRRLDD---GETSGAVIRS 125

Query: 1297 KEAQRRTGVGSYFRRQETAMTRCHWQIIQLVPSSQSGVFLAWVVVEGIMVRIPITVPRLF 1356
            + A   TG+G + R+   +M    WQI+Q++ ++  G F  W ++   +  I + VPR+F
Sbjct: 126  RPA---TGLGGFLRKTARSMMDMPWQIVQIMETAAPGQFKLWALIGSDLHGIRLNVPRIF 182

Query: 1357 YLNSKDPIVEKFPG--RRVNKTLPHGR---------------RS---FNLIEVMIDEDQF 1396
            Y+N + P  +   G  R+ N+TLP                  RS   +NL E  + E+ +
Sbjct: 183  YVNQRVPKEDSEGGVWRKANRTLPRSNPVYNLYEYSVPEETYRSNPVYNLYEYSVPEETY 242

Query: 1397 RKESKKLAALLADPEVE 1413
            R+   ++ A L+ PEVE
Sbjct: 243  REHMNEITADLSAPEVE 259



 Score = 48.1 bits (113), Expect = 0.049,   Method: Compositional matrix adjust.
 Identities = 26/65 (40%), Positives = 36/65 (55%), Gaps = 3/65 (4%)

Query: 1442 LARYAHILWISDDGVPDLGGTSEEDECFADE---VHQPVLTYPGAYRKVSVELKIHHLSV 1498
            L ++ H+LW S +  PDLGG   +D     E   V    L  PG Y  V VEL+I +L+V
Sbjct: 515  LQKHNHLLWCSPNERPDLGGKEADDNRLVTEFEDVTSVELNNPGCYHTVCVELEISNLAV 574

Query: 1499 NALLK 1503
            N +L+
Sbjct: 575  NTILQ 579


>gi|222445338|ref|ZP_03607853.1| hypothetical protein METSMIALI_00966 [Methanobrevibacter smithii
           DSM 2375]
 gi|222434903|gb|EEE42068.1| DNA polymerase family B, exonuclease domain protein
           [Methanobrevibacter smithii DSM 2375]
          Length = 595

 Score = 78.2 bits (191), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 83/333 (24%), Positives = 143/333 (42%), Gaps = 51/333 (15%)

Query: 187 LDCIVDLREYDVPYHIRFAIDNDV-------RCGQW-----------YDVSISSTGPLLE 228
           LD +  +RE+D+P++ R+ ID DV        CG+            +D+ I      LE
Sbjct: 102 LDSVDHIREHDIPFYRRYLIDRDVIPMTEVKACGEKIDSFLNLDSKKHDLEIIKLTKPLE 161

Query: 229 KRVDLLQRAEVHVCAFDIETTKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIE 288
           +  D LQ  +  + +FD+E    P   P+++ D I+MI    +     +I+ +   ED +
Sbjct: 162 RVNDDLQ--DFRILSFDLEVRN-PHGMPNSEVDEIIMIGVASNFGINQVISTKTNSEDRD 218

Query: 289 DLEYTPKPEFEGYFKVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAH 348
           D              V  V +E E++  +   +++    I V YN D FD P+L+ RA  
Sbjct: 219 DF-------------VNQVESEKEMIETFIDIVKKSNVDIIVGYNSDNFDLPYLKDRAKL 265

Query: 349 HGFKMSEELGFQCDKNQGECRAKFA--------CHLDCFAWVKRDSYLPQGSQGLKAVTK 400
           +G ++  +LG   D N    R  FA         H+D +  ++R  Y+      L+ V  
Sbjct: 266 YGLEL--DLGMD-DSNIKFIRRGFANAASFKGLIHVDLYLVMRR--YMTLERYTLERVYY 320

Query: 401 AKLGYDPLEVNPEDMVRFAKEKPQMMA---SYSVSDAVATYYLYMTYVHPFIFSLATIIP 457
              G + ++V  E +  +       +     YS+ D V+T  +    + P    L  I+ 
Sbjct: 321 ELFGEEKIDVPGEHIWEYWDSDSTELDDLFDYSLDDVVSTLKIAQQTL-PLNLELTRIVG 379

Query: 458 MSPDEVLRKGSGTLCEMLLMVQAYKANVICPNK 490
               ++ R  +G   E  L+ +AY  N + PNK
Sbjct: 380 QPLFDLSRMATGQQAEWFLVKEAYFDNEVVPNK 412


>gi|413936999|gb|AFW71550.1| putative DNA polymerase epsilon catalytic subunit family protein
           [Zea mays]
          Length = 38

 Score = 77.0 bits (188), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 31/35 (88%), Positives = 33/35 (94%)

Query: 321 MQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSE 355
           MQEVKPGIYVTYNGD+FDWPFLE RAAHHG KM+E
Sbjct: 1   MQEVKPGIYVTYNGDFFDWPFLEKRAAHHGIKMNE 35


>gi|134046285|ref|YP_001097770.1| replicative DNA polymerase I [Methanococcus maripaludis C5]
 gi|132663910|gb|ABO35556.1| replicative DNA polymerase I [Methanococcus maripaludis C5]
          Length = 780

 Score = 77.0 bits (188), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 87/345 (25%), Positives = 149/345 (43%), Gaps = 46/345 (13%)

Query: 193 LREYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLLEKRVDLLQRAEVHVCAFDIETTKLP 252
           L EYD+P+  R+ IDN V     +D        L++ ++      E    +FDIE     
Sbjct: 109 LYEYDIPFIRRYMIDNKVIPTSNWDFE---KNKLMDNKI-----PEFKTVSFDIEV--YC 158

Query: 253 LKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNVNNEIE 312
            K P+A  D I+M S+    Q  ++  ++    D + LEY              V +E E
Sbjct: 159 HKEPNAKKDPIIMASFSSKDQNIVVSTKKF---DHDKLEY--------------VKDEKE 201

Query: 313 LLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDK---NQGECR 369
           L++     +++    I  TYNGD FD+P+L+ RA   G ++  +LG   +K    +G   
Sbjct: 202 LIKRIIEILKDY--DIIYTYNGDNFDFPYLKKRAEVFGLEL--KLGKNDEKIKITKGGMN 257

Query: 370 AKF----ACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQM 425
           +K       H+D +   +R   L      L+ VT+A      ++V  E++ +      + 
Sbjct: 258 SKSYIPGRVHIDLYPIARR--LLNLTKYRLENVTEALFDVKKVDVGHENIPKMWDNLDET 315

Query: 426 MASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANV 485
           +  YS  DA  T  +   ++ P     + ++  S  ++ R  S  + E LL+  +Y   V
Sbjct: 316 LVEYSYQDAYYTQRIGEQFL-PLEIMFSRVVNQSLYDINRMSSSQMVEYLLLKNSYNKGV 374

Query: 486 ICPNKHQSDPEKFYRNHLLESETYIGGHVECLESGVFRSDLPTSF 530
           I PN+      K Y+  +  S  Y GG+V+    G+    +   F
Sbjct: 375 IAPNRPSG---KEYQKRIRSS--YEGGYVKEPIKGIHEDIVSMDF 414



 Score = 45.4 bits (106), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 67/297 (22%), Positives = 117/297 (39%), Gaps = 56/297 (18%)

Query: 770  LYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIG-KPLE 828
            + D  Q + K + NS YGY+    ARWYS + A + T+ G + IQ      E  G K + 
Sbjct: 491  ILDYEQRSIKVLANSHYGYLAFPMARWYSRDCAEITTHLGRQYIQKTIEEAENFGFKVIY 550

Query: 829  LDTDGIWCVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSK 888
             DTDG +                   +KLT     ++    +   N ND+          
Sbjct: 551  ADTDGFYSKWANG-------------EKLTND--ELLEKTKIFLKNINDKLP-------- 587

Query: 889  TYETHSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGEL 948
                  E  +EFE  G +K  I         + KK+YA+ +++  +  +KG E+ RR   
Sbjct: 588  -----GEMELEFE--GYFKRGIF--------VTKKKYALIDENEKIT-IKGLEVVRRDWS 631

Query: 949  KLIKVFQAELFDKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTM 1008
             + K  Q  + +  L   ++E     +        D      + +   +L+ +    + +
Sbjct: 632  NVSKNTQKSVLNALLKEGSVENAKKVIQDTIKELKD------RKVDKEDLLIH----TQL 681

Query: 1009 SKSLADYGEQKSCAVTTARRLSDFLGDTMVKDKGLRCQYIVACEPQGTPVSERAVPV 1065
            +K + DY +  +  V  A+++   L      + G    YI+        +SERA P+
Sbjct: 682  TKRIEDY-KTTAPHVEVAKKI---LKSGNRVNTGDVISYIITG--GNKSISERAEPI 732


>gi|424812763|ref|ZP_18238003.1| DNA polymerase, pol2 [Candidatus Nanosalinarum sp. J07AB56]
 gi|339756985|gb|EGQ40568.1| DNA polymerase, pol2 [Candidatus Nanosalinarum sp. J07AB56]
          Length = 800

 Score = 75.9 bits (185), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 85/316 (26%), Positives = 139/316 (43%), Gaps = 34/316 (10%)

Query: 187 LDCIVDLREYDVPYHIRFAIDNDVRCGQWYDVS-ISSTGPLLEKRVDLLQRAEVHVCA-- 243
           LD + D RE+D+P++ R+ IDN +     Y VS + ++G L+E         E   C   
Sbjct: 112 LDTVDDTREFDIPFYKRWLIDNAI-----YPVSKVRASGQLVEHE-------EFETCMEL 159

Query: 244 FDIETTKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFK 303
            DIET            +    +++ L+     +I     GED   L  T   E +  F 
Sbjct: 160 EDIETLDRETS------ESYRHVAFDLETFQGRVIMASLWGEDTRRLLTT--EEIDRDF- 210

Query: 304 VTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMS-----EELG 358
           V  V +E EL++   A +++        YN D FD+  L  RA   G  +S     E++ 
Sbjct: 211 VETVEDEAELIQRLVAFVRDTDVDTLTGYNTDEFDFHRLRERAESLGIDLSMGRNGEKMR 270

Query: 359 FQCDKNQGECRAKFACHLDCFAWVKR--DSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMV 416
           F+        R K   HLD + +V+      L   +  L +V +  LG +  +V+ E+M 
Sbjct: 271 FKRRGRFSSARLKGRMHLDLYPFVQHVLGPGLETTTLDLDSVAEELLGENKDDVSWEEMK 330

Query: 417 RFAKEKPQM--MASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEM 474
              +EK  +   A Y++ DA   Y L    V P +  ++ +  + P +  R   G L E 
Sbjct: 331 EMWREKKDLERFADYALKDARLAYQLGEQIV-PQMMEISRLTGLIPFDACRLTYGQLAEN 389

Query: 475 LLMVQAYKANVICPNK 490
            L+ +AYK  ++ PN+
Sbjct: 390 FLVREAYKREMMAPNR 405



 Score = 57.0 bits (136), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 68/269 (25%), Positives = 109/269 (40%), Gaps = 56/269 (20%)

Query: 716 ICMRENSFYVDTVRSFRDRRYEYKGLNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQ 775
            C  E  F+ + +    + R    G+    K +L+EA          E  D  +   S  
Sbjct: 477 FCQDEQGFFPELIEGLVEER---AGI----KDELAEAA---------EGTDEYLSLRSKS 520

Query: 776 LAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIW 835
            A K + N+FYGY+   GARWYS + A  VTY G + IQ++          ++   D  +
Sbjct: 521 TARKVLANAFYGYLAYAGARWYSDDCASAVTYLGREYIQDS----------IDTARDKGF 570

Query: 836 CVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSE 895
            V+ G                       VML     R N  +     ++ V+ T      
Sbjct: 571 EVVYG-------------------DTDSVMLK----RENLREHLDGFLENVNSTLPEF-- 605

Query: 896 CSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQ 955
             +E E +G ++      S  EG   KK+YA+ +++G L ++ GFE  RR    + K  Q
Sbjct: 606 --MELEFEGYFERGFF-TSTGEGRGAKKKYALLDEEGDL-KIVGFEQVRRDWAPIAKNLQ 661

Query: 956 AELFDKFLHGSTIEECYSAVAAVANRWLD 984
            ++ +K L+  + +E  S V     R  D
Sbjct: 662 RKVLEKVLNEQS-DEAASLVMDTVERLKD 689


>gi|150403298|ref|YP_001330592.1| DNA polymerase Pol2 [Methanococcus maripaludis C7]
 gi|150034328|gb|ABR66441.1| DNA polymerase Pol2 [Methanococcus maripaludis C7]
          Length = 780

 Score = 75.5 bits (184), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 87/345 (25%), Positives = 149/345 (43%), Gaps = 46/345 (13%)

Query: 193 LREYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLLEKRVDLLQRAEVHVCAFDIETTKLP 252
           L EYD+P+  R+ IDN V     +D   +S   L++ ++      E    +FDIE     
Sbjct: 109 LYEYDIPFIKRYLIDNSVIPTSNWDFENNS---LIDNKI-----PEFKTVSFDIEV--YC 158

Query: 253 LKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNVNNEIE 312
            K PD   D I+M S+       ++  ++    D + LEY              V +E E
Sbjct: 159 NKEPDPKKDPIIMASFSSKDHNVVVSTKKF---DHDKLEY--------------VKDEKE 201

Query: 313 LLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDK---NQGECR 369
           L++     +++    I  TYNGD FD+P+L+ RA   G ++  +LG   +K    +G   
Sbjct: 202 LIKRIIEILKDY--DIIYTYNGDNFDFPYLKKRAEVFGLEL--KLGKNDEKIKITKGGIN 257

Query: 370 AKF----ACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQM 425
           +K       H+D +   +R   L      L+ VT+A      ++V  E++ +      + 
Sbjct: 258 SKSYIPGRVHIDLYPIARR--LLNLTKYRLENVTEALFDVKKVDVGHENIPKMWDNLDET 315

Query: 426 MASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANV 485
           +  YS  DA  T  +   ++ P     + ++  S  ++ R  S  + E LL+  +Y   V
Sbjct: 316 LVEYSYQDAYYTQKIGEQFL-PLEIMFSRVVNQSLYDINRMSSSQMVEYLLLKNSYNKGV 374

Query: 486 ICPNKHQSDPEKFYRNHLLESETYIGGHVECLESGVFRSDLPTSF 530
           I PN+      K Y+  +  S  Y GG+V+    G+    +   F
Sbjct: 375 IAPNRPSG---KEYQKRIRSS--YEGGYVKEPLKGIHEDIVSMDF 414



 Score = 45.8 bits (107), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 66/297 (22%), Positives = 119/297 (40%), Gaps = 56/297 (18%)

Query: 770  LYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIG-KPLE 828
            + D  Q + K + NS YGY+    ARWYS + A + T+ G + IQ      E  G K + 
Sbjct: 491  ILDYEQRSIKVLANSHYGYLAFPMARWYSRDCAEITTHLGRQYIQKTIEEAENFGFKVIY 550

Query: 829  LDTDGIWCVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSK 888
             DTDG +                   KKLT             R+   ++ +T +  ++ 
Sbjct: 551  ADTDGFYSKWADG-------------KKLT-------------RDELLEKTKTFLKNIND 584

Query: 889  TYETHSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGEL 948
              +   E  +EFE  G +K  I         + KK+YA+ +++  +  +KG E+ RR   
Sbjct: 585  --KLPGEMELEFE--GYFKRGIF--------VTKKKYALIDENEKIT-VKGLEVVRRDWS 631

Query: 949  KLIKVFQAELFDKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTM 1008
             + K  Q  + +  L   ++E     +             +  ++   +L+ +    + +
Sbjct: 632  NVSKNTQKSVLNALLKEGSVENAKKVIQDTIKEL------KNGNVKKEDLLIH----TQL 681

Query: 1009 SKSLADYGEQKSCAVTTARRLSDFLGDTMVKDKGLRCQYIVACEPQGTPVSERAVPV 1065
            +K + DY +  S  V  A+++        +   G    YI+        +SERA P+
Sbjct: 682  TKRIEDY-KTTSPHVEVAKKIIKSGNRVNI---GEVISYIITS--GNKSISERAEPI 732


>gi|284161393|ref|YP_003400016.1| DNA polymerase Pol2 [Archaeoglobus profundus DSM 5631]
 gi|284011390|gb|ADB57343.1| DNA polymerase Pol2 [Archaeoglobus profundus DSM 5631]
          Length = 783

 Score = 75.5 bits (184), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 90/369 (24%), Positives = 154/369 (41%), Gaps = 72/369 (19%)

Query: 192 DLREYDVPYHIRFAIDNDVRCGQWYDVSISST--GPLLEKRVDLLQRAE------VHVCA 243
           ++RE D+P+  R+ ID D+ C    ++   +   G L    V  ++R E      + + A
Sbjct: 106 EVREADIPFAYRYLIDKDLACMDGIEIEPIAVKEGVLRAYEVRSVRRVEKKGFPDLKILA 165

Query: 244 FDIETTKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFK 303
           FD E   L    PD + D I+ I+             +C                 G F+
Sbjct: 166 FDCEM--LAQFMPDPEKDPIIAIAV------------KC-----------------GDFE 194

Query: 304 VTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMS-----EELG 358
                +E ++LR + + ++E  P I V YN D FDWP+++ RA   G ++       E+ 
Sbjct: 195 EVLHGDERDILRRFVSIIKEQDPDIIVGYNQDNFDWPYVKKRAEKFGIRLDIGRDRSEIS 254

Query: 359 FQCDKNQGECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAK--LGYDPLEVNPEDM- 415
           F+        R K A  L+   +   D  L      +K + K    LG    +V  ED+ 
Sbjct: 255 FRGG------RPKIAGRLNVDLY---DIALKIPDVKIKTLKKVAEFLG---AKVEEEDIE 302

Query: 416 --------VRFAKEKPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKG 467
                   +R  KEK   +  + ++D + TY L +  + P  + L+ +I +  D+V R G
Sbjct: 303 GRDIYKCWMRGEKEK---VFKHVLNDVLTTYRLALELL-PMHYELSRMIRLPLDDVARLG 358

Query: 468 SGTLCEMLLMVQAYKANVICPNKHQSDPEKFYRNHLLESETYIGGHVECLESGVFRSDLP 527
            G   +  L+ +A K N I PN  + + E +    +LE    +  +V CL+       + 
Sbjct: 359 RGKQVDYFLLSEAKKINEIAPNPPEIE-ESYEGAFVLEPARGLHENVACLDFASMYPSIM 417

Query: 528 TSFKLDPSA 536
            +F + P  
Sbjct: 418 INFNISPDT 426



 Score = 62.0 bits (149), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 89/345 (25%), Positives = 137/345 (39%), Gaps = 68/345 (19%)

Query: 770  LYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIG-KPLE 828
            L D  Q   K + NSFYGY     ARWY  E A   T  G   I+ A  + E +G + L 
Sbjct: 483  LLDIKQQTLKVLTNSFYGYTGWNLARWYCRECAEATTAWGRYFIKRAVKIAESMGFEVLY 542

Query: 829  LDTDGIWCVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSK 888
             DTD +       F +      KDL+K+      C+                 L+D +SK
Sbjct: 543  GDTDSL-------FIKKNKLNLKDLEKE------CL----------------KLIDVISK 573

Query: 889  TYETHSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGEL 948
                  E  I+ E+D  YKA+          + KKRYA   DD  +  +KG E++R    
Sbjct: 574  ------ELPIQLEIDEFYKAIFF--------VEKKRYAGLTDDDRIV-VKGLEVRRGDWC 618

Query: 949  KLIKVFQAELFDKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTM 1008
            +L K  Q E+ +  L     ++    V  V          +GK     +L DY+      
Sbjct: 619  ELAKRVQREVIEIILRERNPDKALKFVKNVIEEI-----KEGK----FKLEDYVIYKGLT 669

Query: 1009 SKSLADYGEQKSCAVTTARRLSDFLGDTMVKDKGLRCQYIVACEPQGTPVSERAVPVAIF 1068
             K   D  E K   V  A R  +     +    G +  +++     G  +S+RA P+ + 
Sbjct: 670  KKP--DKYESKQAHVKAALRAMEM---GIYYPIGTKVGFVIV--KGGGSISDRAYPIELI 722

Query: 1069 ET-DAEIMKFYLRKWCKTSSDVGIRSIVDWSYYKQRLSSAIQKII 1112
            E  D E +K       +T S + ++ I    Y   ++  A+ +I+
Sbjct: 723  EEFDGENLKI------RTPSGIMVKKIDKDYYIDHQIIPAVMRIL 761


>gi|150401083|ref|YP_001324849.1| DNA polymerase Pol2 [Methanococcus aeolicus Nankai-3]
 gi|150013786|gb|ABR56237.1| DNA polymerase Pol2 [Methanococcus aeolicus Nankai-3]
          Length = 811

 Score = 74.3 bits (181), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 91/367 (24%), Positives = 155/367 (42%), Gaps = 50/367 (13%)

Query: 178 KREQRPQDFLDC-IVDLREYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLLEKRVDLLQR 236
           K  QR  +F +  I    E+D+P+  R+ IDN+                   K +DLL  
Sbjct: 105 KANQRLANFPNGKIGTTYEHDIPFTKRYLIDNN-------------------KNIDLLNY 145

Query: 237 ---AEVHVCAFDIETTKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYT 293
               ++   +FD+E      + P+ + D I+M S+          + +           T
Sbjct: 146 NNIPDLKAVSFDMEV-HFKDREPEPEKDAILMTSFY---------SHDKKINKKIKKVIT 195

Query: 294 PKPEFEGYFKVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKM 353
            KP FE +  V  V +E EL++     +++    I  TYNGD FD+P+L+ RA H    +
Sbjct: 196 YKP-FE-HESVEIVKDEKELIKKTMELLKQY--NIIYTYNGDNFDFPYLKRRAEHLKIPL 251

Query: 354 SEELGFQCDKNQGECRAKFA----CHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLE 409
           +     +   ++G    K A     H+D +   +R   L +    L+ V+K     + LE
Sbjct: 252 NFGENHKLKLSKGGMNLKSAISGIVHIDLYPIARRTLNLTK--YKLEDVSKELFNIEKLE 309

Query: 410 VNPEDMVRFAKEKPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSG 469
           V   ++V         +  YS+ DA  TY +   Y  P     + I+     ++ R  S 
Sbjct: 310 VGHHNIVPLWNNNNPKLVEYSLQDAEYTYKI-GEYFLPLEIMFSNIVGQCLFDISRMSSS 368

Query: 470 TLCEMLLMVQAYKANVICPNKHQSDPEKFYRNHLLESETYIGGHVECLESGVFRSDLPTS 529
            + E LL+  ++  N + PN+   +    Y+N L   E Y GG+V+    G+  + +   
Sbjct: 369 NMVEYLLLKHSFNKNYLAPNRPYGNE---YQNRL--KEGYEGGYVKEPIKGMHDNIVSMD 423

Query: 530 FK-LDPS 535
           F+ L PS
Sbjct: 424 FRALYPS 430



 Score = 52.8 bits (125), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 72/300 (24%), Positives = 121/300 (40%), Gaps = 61/300 (20%)

Query: 775  QLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIG-KPLELDTDG 833
            Q + K + NSFYGY+    ARWYS E A V+T+ G   I+      E  G   +  DTDG
Sbjct: 513  QQSIKILANSFYGYMAYPRARWYSKECAEVITHLGRAYIRKTIEEAENNGFNVIYADTDG 572

Query: 834  IWCVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETH 893
            ++ +L                              D  +N   ++   L   +    E +
Sbjct: 573  LYAIL------------------------------DENKNKNTNKENILNKTIKFLNEIN 602

Query: 894  SEC--SIEFEVDGPYKAMILPASKEEGILI-KKRYAVFNDDGTLAELKGFEIKRRGELKL 950
             E    +E E +G YK          GI I KKRYA+ +++  +  +KG E  RR    +
Sbjct: 603  RELPEKMELEFEGYYK---------RGIFITKKRYALIDENNKII-VKGLEFVRRDWSNI 652

Query: 951  IKVFQAELFDKFLHGSTIEECYSAVAAVANRWLDLLDNQ-------GKDIADSELIDYIS 1003
             K  Q ++ +  L    +E     +    N   +L  ++        K I   +LI Y  
Sbjct: 653  AKKTQKKVLNTLLKEGDVETAKQIIKDTINDLKNLPQSKIGESPGGDKKINPKDLIIY-- 710

Query: 1004 ESSTMSKSLADYGEQKSCAVTTARRLSDFLGDTMVKDKGLRCQYIVACEPQGTPVSERAV 1063
                ++K +++Y    +  +  A+++ D  GD +    G    +++      +P+SERA 
Sbjct: 711  --KQLTKDISEYS-TATPHIAVAKKMRD-RGDRL--KIGDVIGFVIVN--GSSPISERAT 762


>gi|255514001|gb|EET90265.1| DNA polymerase Pol2 [Candidatus Micrarchaeum acidiphilum ARMAN-2]
          Length = 826

 Score = 74.3 bits (181), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 96/398 (24%), Positives = 163/398 (40%), Gaps = 68/398 (17%)

Query: 181 QRPQDF------LDCIVDLREYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLLE----KR 230
           Q P D       L  + +  E D+P+  R+ ID D+     Y+  +   G        K 
Sbjct: 112 QNPSDVPKLSAALSGLGECYENDIPFSKRYLIDKDILPLTMYEFDLEKQGSAYRLKGFKA 171

Query: 231 VDLLQRAEVHVCAFDIETTKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDL 290
           +  ++  E++V  FDIET   PL  P  + D ++MISY     G         G+ +   
Sbjct: 172 LPEVRPPELNVLWFDIETYN-PLGVPRPEKDPVVMISYSYSSNG-------KHGKSVMAF 223

Query: 291 EYTPKPEFEGYFKVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHG 350
           +    P  E Y       +E ++++ +   + E+   +   YN   FD  +L  R+    
Sbjct: 224 KKIDLPFVEYY------ESEADMIKAFVKKIAELDIDVISGYNSANFDIRYLIERSK--- 274

Query: 351 FKMSEELGFQCDKNQGECRAK-----------FACHLDCFAWVKRDSY-------LPQGS 392
              S ++ F   + +GE R +              H+D +  VK  S        L   S
Sbjct: 275 ---SIKVDFNISRFEGETRIERHGLVDRVKIGGRVHVDMYVVVKFISVVGAAEYILKLNS 331

Query: 393 QGLKAVTKAKLGYDPLEVNPEDMVRF---AKEKPQMMASYSVSDAVATYYLYMTYVHPFI 449
             LK V +A  G     V  +D+ +    ++E+ + +A+Y++SD+ A   +Y T+  P +
Sbjct: 332 YTLKNVYEAITGTKKTNVEKKDIYKLWDGSREELEELATYNLSDSEALEKVYSTFA-PIM 390

Query: 450 FSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVICPNKHQSDPEKFYRNHLLESETY 509
             L      S  +V    +G L E LLM  A++   + PNK     ++  R+ L+     
Sbjct: 391 IELTRTTGNSLSDVSVSTTGQLVEFLLMKYAHRYGELIPNKPD---DREIRSRLINPIE- 446

Query: 510 IGGHVECLESGV--------FRSDLPT---SFKLDPSA 536
            G +V+  E G+        FR   P+   S  +DPS 
Sbjct: 447 -GAYVKTPEPGIYSNLAIFDFRGLYPSIIISHNIDPST 483



 Score = 54.7 bits (130), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 61/218 (27%), Positives = 92/218 (42%), Gaps = 46/218 (21%)

Query: 777 AHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAK-IIQNARLLIEKIGKPLELDTDGIW 835
           A K   NSFYGY+    +RWYS E A  VT  G + I+Q      E+  K +  DTD I 
Sbjct: 541 ALKITSNSFYGYLGYARSRWYSRECASSVTAYGRQYILQTISDAEEQGFKVIYGDTDSIV 600

Query: 836 CVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSE 895
            +L G   E+     K L +KL                                      
Sbjct: 601 MLLGGRTKEDALEFVKKLNEKLP------------------------------------- 623

Query: 896 CSIEFEVDGPYKAMILPASKEEGI----LIKKRYAVFNDDGTLAELKGFEIKRRGELKLI 951
            S+E E++  YK  +    K E I      KK+YA+ ++ G + +++GFE+ RR   ++ 
Sbjct: 624 KSMELELEDFYKRAVFVGKKSEKIGAITGAKKKYAMISESGFI-KIRGFELVRRDWSRIA 682

Query: 952 KVFQAELFDKFLHGSTIEECYSAVAAVANRWLDLLDNQ 989
           +  Q ++ D  L+  + E+   AV  V N   DL D +
Sbjct: 683 RDTQRKVLDTILNEGSAEK---AVEIVKNVIKDLRDGK 717


>gi|45357943|ref|NP_987500.1| DNA polymerase B protein [Methanococcus maripaludis S2]
 gi|44920700|emb|CAF29936.1| DNA polymerase family B [Methanococcus maripaludis S2]
          Length = 784

 Score = 73.9 bits (180), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 117/473 (24%), Positives = 199/473 (42%), Gaps = 80/473 (16%)

Query: 65  CIDLYFVSQDGSTFKSKYKFRPYFYAATKEKMEMDVEAYLRRRYESQIADIEILEKEDLD 124
           CI LY ++   S  K K  F+PYFY  + +K +  +  +L+        D E   K D +
Sbjct: 15  CIYLYLIN---SIIKEK-DFKPYFYVNSTDKEQ--ILEFLK--------DYEKKHKLDSE 60

Query: 125 LKNHLSGLHKSYLKISFDTVQQLMDVKKDLLHVVERNQAKFDAAEAYESILTGKREQRPQ 184
           +   +  + ++  KI FD   Q  ++ K  + V   N  K       E ++  +R     
Sbjct: 61  ISKMIENI-ETVKKIVFDENYQEKELSK--VTVKYPNNVK----TVREILMEFER----- 108

Query: 185 DFLDCIVDLREYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLLEKRVDLLQRAEVHVCAF 244
                   L EYD+P+  R+ IDN V     +D   +       K++D  +  +    +F
Sbjct: 109 --------LYEYDIPFVRRYLIDNSVIPTSTWDFENN-------KKIDN-KIPDFKTVSF 152

Query: 245 DIETTKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKV 304
           DIE      K P+   D I+M S+       ++  ++    D E LEY            
Sbjct: 153 DIEV--YCNKEPNPKKDPIIMASFSSKDFNTVVSTKKF---DHEKLEY------------ 195

Query: 305 TNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDK- 363
             V +E EL++     ++E    I  TYNGD FD+P+L+ RA   G ++  +LG   +K 
Sbjct: 196 --VKDEKELIKRIIEILKEY--DIIYTYNGDNFDFPYLKKRAESFGLEL--KLGKNDEKI 249

Query: 364 --NQGECRAKF----ACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVR 417
              +G   +K       H+D +   +R   L      L+ VT+A      ++V  E++ +
Sbjct: 250 KITKGGMNSKSYIPGRVHIDLYPIARR--LLNLTKYRLENVTEALFDVKKVDVGHENIPK 307

Query: 418 FAKEKPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLM 477
                 + +  YS  DA  T  +   ++ P     + ++  S  ++ R  S  + E LL+
Sbjct: 308 MWDNLDETLVEYSHQDAYYTQRIGEQFL-PLEIMFSRVVNQSLYDINRMSSSQMVEYLLL 366

Query: 478 VQAYKANVICPNKHQSDPEKFYRNHLLESETYIGGHVECLESGVFRSDLPTSF 530
             +YK  VI PN+      K Y+  +  S  Y GG+V+    G+    +   F
Sbjct: 367 KNSYKMGVIAPNRPSG---KEYQKRIRSS--YEGGYVKEPLKGIHEDIVSMDF 414



 Score = 47.8 bits (112), Expect = 0.069,   Method: Compositional matrix adjust.
 Identities = 55/207 (26%), Positives = 87/207 (42%), Gaps = 39/207 (18%)

Query: 770 LYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIG-KPLE 828
           + D  Q + K + NS YGY+    ARWYS + A + T+ G + IQ      E  G K + 
Sbjct: 494 ILDYEQRSIKVLANSHYGYLAFPMARWYSRDCAEITTHLGRQYIQKTIEEAENFGFKVIY 553

Query: 829 LDTDGIWCVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSK 888
            DTDG +             K  D K+KL+  Y  +    +  +N  N    TL      
Sbjct: 554 ADTDGFYS------------KWADDKEKLS-KYELLEKTREFLKNINN----TL------ 590

Query: 889 TYETHSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGEL 948
                 E  +EFE  G +K  I         + KK+YA+ +++  +  +KG E+ RR   
Sbjct: 591 ----PGEMELEFE--GYFKRGIF--------VTKKKYALIDENEKIT-VKGLEVVRRDWS 635

Query: 949 KLIKVFQAELFDKFLHGSTIEECYSAV 975
            + K  Q  + +  L   ++E     +
Sbjct: 636 NVSKNTQKNVLNALLKEGSVENAKKVI 662


>gi|402587628|gb|EJW81563.1| hypothetical protein WUBG_07529 [Wuchereria bancrofti]
          Length = 314

 Score = 73.9 bits (180), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 48/177 (27%), Positives = 78/177 (44%), Gaps = 7/177 (3%)

Query: 1809 DAPLEFIKHVCAAFALDQNVQHDVLVMRKNLLKYVRVREFAPEAEFRDPCPSFILPNVIC 1868
            D+ +  +K +     LD  V   +  +R  LL+ + V + + +  ++    S  L  + C
Sbjct: 144  DSIILMVKGISHFIGLDCIVYESISKLRYQLLRMLNVNDASHDGTWQSLNVSCTLTQLFC 203

Query: 1869 SYCNDCRDLDLCRDMALLAQDWHCAMPQCGQPYDREVMENALLQIVRQRERLYHLQDLVC 1928
            S C    DLD+C+  A     W C  P CG+ +D   +E  L++ V Q    Y +QD  C
Sbjct: 204  SVCCQSSDLDICQSEA-----WIC--PSCGKHFDSFTIEQLLIERVNQLLIAYTIQDFKC 256

Query: 1929 IRCNQVKAAHLAEQCACAGSFRCKEDASDFRSKMQIFLNIANRQGFQLLQECTSWIL 1985
             RC  V+  +L+  C C G        ++ R  ++    IA +     L E   WIL
Sbjct: 257  TRCGAVRRHNLSLFCDCCGVEENIISPAELRFNLETIGKIAQQHDLIRLSELCEWIL 313


>gi|340623568|ref|YP_004742021.1| DNA polymerase Pol2 [Methanococcus maripaludis X1]
 gi|339903836|gb|AEK19278.1| DNA polymerase Pol2 [Methanococcus maripaludis X1]
          Length = 784

 Score = 72.8 bits (177), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 116/473 (24%), Positives = 199/473 (42%), Gaps = 80/473 (16%)

Query: 65  CIDLYFVSQDGSTFKSKYKFRPYFYAATKEKMEMDVEAYLRRRYESQIADIEILEKEDLD 124
           CI LY ++   S  K K  F+PYFY  + +K +  +  +L+        D E   K D +
Sbjct: 15  CIYLYLIN---SIIKEK-DFKPYFYVNSTDKEQ--ILEFLK--------DYEKKHKIDSE 60

Query: 125 LKNHLSGLHKSYLKISFDTVQQLMDVKKDLLHVVERNQAKFDAAEAYESILTGKREQRPQ 184
           +   +  + ++  KI FD   Q  ++ K  + V   N  K       E ++  +R     
Sbjct: 61  ISKMIENI-ETVKKIVFDENYQEKELSK--VTVKYPNNVK----TVREILMEFER----- 108

Query: 185 DFLDCIVDLREYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLLEKRVDLLQRAEVHVCAF 244
                   L EYD+P+  R+ IDN V     +D   +       K++D  +  +    +F
Sbjct: 109 --------LYEYDIPFVRRYLIDNSVIPTSTWDFDNN-------KKIDN-KIPDFKTVSF 152

Query: 245 DIETTKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKV 304
           DIE      K P+   D I+M S+       ++  ++    D E LEY            
Sbjct: 153 DIEV--YCNKEPNPKKDPIIMASFSSKDFNTVVSTKKF---DHEKLEY------------ 195

Query: 305 TNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDK- 363
             V +E EL++     +++    I  TYNGD FD+P+L+ RA   G ++  +LG   +K 
Sbjct: 196 --VKDEKELIKRIIEILKDY--DIIYTYNGDNFDFPYLKKRAESFGLEL--KLGKNDEKI 249

Query: 364 --NQGECRAKF----ACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVR 417
              +G   +K       H+D +   +R   L      L+ VT+A      ++V  E++ +
Sbjct: 250 KITKGGMNSKSYIPGRVHIDLYPIARR--LLNLTKYRLENVTEALFDVKKVDVGHENIPK 307

Query: 418 FAKEKPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLM 477
                 + +  YS  DA  T  +   ++ P     + ++  S  ++ R  S  + E LL+
Sbjct: 308 MWDNLDETLVEYSHQDAYYTQRIGEQFL-PLEIMFSRVVNQSLYDINRMSSSQMVEYLLL 366

Query: 478 VQAYKANVICPNKHQSDPEKFYRNHLLESETYIGGHVECLESGVFRSDLPTSF 530
             +YK  VI PN+      K Y+  +  S  Y GG+V+    G+    +   F
Sbjct: 367 KNSYKMGVIAPNRPSG---KEYQKRIRSS--YEGGYVKEPLKGIHEDIVSMDF 414



 Score = 46.2 bits (108), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 51/207 (24%), Positives = 88/207 (42%), Gaps = 39/207 (18%)

Query: 770 LYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIG-KPLE 828
           + D  Q + K + NS YGY+    ARWYS + A + T+ G + IQ      E  G K + 
Sbjct: 494 ILDYEQRSIKVLANSHYGYLAFPMARWYSRDCAEITTHLGRQYIQKTIEEAENFGFKVIY 553

Query: 829 LDTDGIWCVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSK 888
            DTDG +             K  D K+KL             +++   ++ +  +  ++ 
Sbjct: 554 ADTDGFYS------------KWADDKEKL-------------SKDELLEKTREFLKNINN 588

Query: 889 TYETHSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGEL 948
           T     E  +EFE  G +K  I         + KK+YA+ +++  +  +KG E+ RR   
Sbjct: 589 T--LPGEMELEFE--GYFKRGIF--------VTKKKYALIDENEKIT-VKGLEVVRRDWS 635

Query: 949 KLIKVFQAELFDKFLHGSTIEECYSAV 975
            + K  Q  + +  L   ++E     +
Sbjct: 636 NVSKNTQKNVLNALLKEGSVENAKKVI 662


>gi|408382579|ref|ZP_11180122.1| DNA polymerase B region [Methanobacterium formicicum DSM 3637]
 gi|407814655|gb|EKF85279.1| DNA polymerase B region [Methanobacterium formicicum DSM 3637]
          Length = 622

 Score = 72.4 bits (176), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 116/511 (22%), Positives = 200/511 (39%), Gaps = 113/511 (22%)

Query: 72  SQDGSTFKSKYKFRPYFYAATKEKMEMDVEAYLRRRYESQIADIEILEKEDLDLKNHLSG 131
           +++G        FRPY Y    +   +D           Q++++++L  E + +KN +  
Sbjct: 32  NEEGHIIVMDKSFRPYIYVIPSDHSRLD-------DCTRQLSELKLLSVEKV-IKNDMGE 83

Query: 132 LHKSYLKISFDTVQQLMDVKKDLLHVVERNQAKFDAAEAYESILTGKREQRPQDFLDCIV 191
           L K  LK++F   Q +  ++  +L+                              L  + 
Sbjct: 84  L-KEVLKVTFKHPQDIPKLRDKILN------------------------------LKSVK 112

Query: 192 DLREYDVPYHIRFAID----------------NDVRCGQWYDVSISSTGPL--------- 226
           ++RE+++P++ R+ ID                N  R  +    S  S  P          
Sbjct: 113 EIREHNIPFYRRYLIDKGLFPLKVVEVQGNILNSPRSSRGVRGSRRSQEPQTGSPEGSSI 172

Query: 227 -------LEKRVDLLQRA--EVHVCAFDIETTKLPLKFPDADYDIIMMISYMLDGQGYLI 277
                  +EK    L+ +  E  V +FDIE    P   P  D D I+MIS+     G+  
Sbjct: 173 QKPCIFQVEKSPTPLESSLPEFTVLSFDIEVYN-PRGMPQPDLDPIIMISFS-SNHGFRK 230

Query: 278 INRECVGEDIEDLEYTPKPEFEGYFKVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYF 337
           +       D  D    P      + +V  V++E ELL  +   +Q   P I + YN D F
Sbjct: 231 VLSTKNTPDSSD----PNGLLLDFVEV--VSHEKELLEKFVETVQSENPDIILGYNSDSF 284

Query: 338 DWPFLETRAAHHGFKMSEELGFQCDKNQGECRAKFA--------CHLDCFAWVKRDSYLP 389
           D+P++  RAA  G  +  +LG      +   R  F+         H+D ++ ++R  Y+ 
Sbjct: 285 DFPYIRDRAAKLGVPL--KLGIDGSSPKF-TRIGFSSSAMIRGRVHIDLYSNIRR--YMH 339

Query: 390 QGSQGLKAVTKAKLGYDPLEVNPEDMVRF----AKEKPQMMASYSVSDAVATYYLYMTYV 445
                L+ V     G + L++ P D +         + + +  YS+ DAVA   +    +
Sbjct: 340 LARHTLEHVYLELFGEEKLDI-PGDKIYLYWDEGGRRLETLFHYSLHDAVAVTRIGERML 398

Query: 446 HPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVICPNKHQSDPEKFYRNHLLE 505
            P    L  I+     +  R  SG L E  L+ ++++   + PNK   D E   R    E
Sbjct: 399 -PLNTELTRIVGQPLFDAARMASGRLVEWYLIRKSFEQGYLVPNKPSPD-ELIQR----E 452

Query: 506 SETYIGGHVECLESGV--------FRSDLPT 528
            +  +GG+V+   SG+        FRS  P+
Sbjct: 453 GKHVVGGYVKEPVSGLHENIVYFDFRSLYPS 483


>gi|150400109|ref|YP_001323876.1| DNA polymerase Pol2 [Methanococcus vannielii SB]
 gi|150012812|gb|ABR55264.1| DNA polymerase Pol2 [Methanococcus vannielii SB]
          Length = 810

 Score = 71.6 bits (174), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 88/355 (24%), Positives = 151/355 (42%), Gaps = 55/355 (15%)

Query: 193 LREYDVPYHIRFAIDNDVRCGQWYD----VSISSTGPLLEKRVDLLQRAEVHVCAFDIET 248
           L EYD+P+  R+ IDN++     +D    +SI++  P L+              +FDIE 
Sbjct: 138 LYEYDIPFTKRYLIDNEIIPTTNWDFKNNLSINNKIPNLK------------AVSFDIEV 185

Query: 249 TKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNVN 308
                K P +  D I+M S+    +  L+I+ +    D                K+  V 
Sbjct: 186 --YCEKEPSSKKDPIIMASFSSKDEN-LVISTKKFNHD----------------KLEVVK 226

Query: 309 NEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDK---NQ 365
           +E EL++     +      +  TYNGD FD+P+L+ RA   G  +  +LG   +K    +
Sbjct: 227 DEKELIKRIIEVLSSY--DVIYTYNGDNFDFPYLKGRAETFGLDL--KLGKNGEKIKITK 282

Query: 366 GECRAKF----ACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKE 421
           G   +K       H+D +   +R   L      L+ VT+   G   ++V  E++ +    
Sbjct: 283 GGINSKSYIPGRVHIDLYPIARR--LLSIARYRLENVTEELFGIKKVDVGHENIPKMWDS 340

Query: 422 KPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAY 481
             + +  YS  DA  T  +   ++ P     + ++  S  ++ R  S  + E LL+  +Y
Sbjct: 341 CDETLVEYSFQDAYYTRKIGEQFL-PLEVMFSRVVNQSLFDINRMSSSQMVEYLLLKNSY 399

Query: 482 KANVICPNKHQSDPEKFYRNHLLESETYIGGHVECLESGVFRSDLPTSF-KLDPS 535
           K  V+ PNK   +    Y+  +  S  Y GG+V+    G+    +   F  L PS
Sbjct: 400 KLGVVSPNKPSGNE---YQKRIRSS--YEGGYVKEPLKGIHEDIISMDFLSLYPS 449



 Score = 46.6 bits (109), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 55/203 (27%), Positives = 76/203 (37%), Gaps = 48/203 (23%)

Query: 770 LYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIG-KPLE 828
           + D  Q + K + NS YGY+    ARWYS + A V T+ G   IQ      E  G   + 
Sbjct: 520 ILDYEQKSIKVLANSHYGYLAFPMARWYSKDCAEVTTHLGRSYIQKTIEEAENFGFNVIY 579

Query: 829 LDTDGI---WCVLPGSFP-ENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVD 884
            DTDG    W    G    E    KTK+  K +    P  M                   
Sbjct: 580 ADTDGFYSKWNSKNGIISKEKLLEKTKEFLKTINDKLPGEM------------------- 620

Query: 885 PVSKTYETHSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKR 944
                         E E +G +K  I         + KK+YA+  D+     +KG E+ R
Sbjct: 621 --------------ELEFEGHFKRGIF--------VTKKKYALI-DENEKVTIKGLEVVR 657

Query: 945 RGELKLIKVFQAELFDKFL-HGS 966
           R    + K  Q  + D+ L HG+
Sbjct: 658 RDWSNISKKTQKNVLDELLKHGN 680


>gi|41614864|ref|NP_963362.1| hypothetical protein NEQ068 [Nanoarchaeum equitans Kin4-M]
 gi|40068588|gb|AAR38923.1| NEQ068 [Nanoarchaeum equitans Kin4-M]
          Length = 676

 Score = 71.6 bits (174), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 85/339 (25%), Positives = 147/339 (43%), Gaps = 40/339 (11%)

Query: 195 EYDVPYHIRFAIDNDVRCGQWYDVS----ISSTGPLLEKRVD---LLQRAEVHVCAFDIE 247
           E D+  + +F ID  +   +W++V     +S++  +  K      L ++ +  V AFDIE
Sbjct: 123 ETDINVYRKFLIDKGIEPFEWFEVEGKILLSTSNKVRIKAQSIKRLYEKTKPSVLAFDIE 182

Query: 248 TTKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNV 307
                  FP+ + D I+ I+   D       N E V      + Y  +P          V
Sbjct: 183 VYSEA--FPNPEKDKIISIALYGD-------NYEGV------ISYKGEP-------TIKV 220

Query: 308 NNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDKNQGE 367
           N E EL+  +   ++ +KP I VTYNGD FD  FL  RA+ +  ++  +L    +K +  
Sbjct: 221 NTEYELIEKFVEIIESLKPDIIVTYNGDNFDIDFLVKRASLYNIRLPIKL---VNKKEPT 277

Query: 368 CRAKFACHLDCFAWVKR--DSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQM 425
              + + H+D +  +     + L   +  L  V K  LG + +      +  +A      
Sbjct: 278 YNFRESAHVDLYKTITTIYKTQLSTQTYSLNEVAKEILGEEKIYDYENMLYDWAIGNYNK 337

Query: 426 MASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANV 485
           +  Y++ DA  TY L+  Y +  +  LA ++     +V R     + E  L+ ++ K N 
Sbjct: 338 VFEYNLKDAELTYKLFKYYEND-LLELARLVNQPLFDVSRFSYSNIVEWYLIKKSRKYNE 396

Query: 486 ICPNKHQSDPEKFYRNHLLESETYIGGHVECLESGVFRS 524
           I PNK +   E+  R  L    TY G  V   + G++ +
Sbjct: 397 IVPNKPKM--EEVERRKL---NTYAGAFVYEPKPGLYEN 430


>gi|325959309|ref|YP_004290775.1| DNA polymerase B exonuclease [Methanobacterium sp. AL-21]
 gi|325330741|gb|ADZ09803.1| DNA polymerase B exonuclease [Methanobacterium sp. AL-21]
          Length = 579

 Score = 71.6 bits (174), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 88/366 (24%), Positives = 157/366 (42%), Gaps = 63/366 (17%)

Query: 192 DLREYDVPYHIRFAIDNDVRCGQWYDVSISSTGPL---------LEKRVDL-LQRAEVHV 241
           ++REYD+P++ R+ IDND+      +V   +   L          E+  D+ L   ++ +
Sbjct: 109 EIREYDIPFYRRYLIDNDLHPMNMVEVRGKTMKTLDNGRCIFEIQEEPTDMGLYPEKLKI 168

Query: 242 CAFDIETTKLPLKFPDADYDIIMMISYMLD-GQGYLIINRECVGEDIEDLEYTPKPEFEG 300
            +F+IE        P+ + D I+MI++  + G   +I  +E   + +E            
Sbjct: 169 LSFNIEAAT-AYGTPNIEKDPIIMINFSSNHGLQRIITTKESSQKFVE------------ 215

Query: 301 YFKVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQ 360
                 V+ E EL++ +   +    P I + YN D +D+P+L  RA     K+  +LG  
Sbjct: 216 -----TVSTEEELIQRFIETVNSEDPDILLGYNSDRYDFPYLTGRAEK--LKVPLKLGVD 268

Query: 361 CDK----NQGECRA---KFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPE 413
             K    N G   A   +   H+D ++ ++R  +LP     +K V K   G D  ++   
Sbjct: 269 GSKLKIRNNGRRNAATIRGRVHIDLYSNLRR--HLPLEHHTIKRVYKELFGADKGDIPDH 326

Query: 414 DMVRFAKE---KPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGT 470
           ++     E   + + +  Y+++D  A   +    + P    L  I+     +V R GSG 
Sbjct: 327 EVYTSFHEGGKRLETLFKYALADVEAVTKIGEKML-PLSIELTRIVGQPLFDVSRMGSGK 385

Query: 471 LCEMLLMVQAYKANVICPNKHQSDPEKFYRNHLLESETYIGGHVECLESGV--------F 522
             E  L+ +AY +  I  NK        + N+L +    +GG+VE    G+        F
Sbjct: 386 QVEWYLIRKAYHSGKIALNK--------FGNYLRD---VVGGYVEEPVQGLQKNIHYFDF 434

Query: 523 RSDLPT 528
           RS  P+
Sbjct: 435 RSLYPS 440



 Score = 40.8 bits (94), Expect = 7.8,   Method: Compositional matrix adjust.
 Identities = 24/65 (36%), Positives = 32/65 (49%), Gaps = 1/65 (1%)

Query: 775 QLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIG-KPLELDTDG 833
           Q A K + N+ YG       RWYS+E +  +T  G   +Q       + G KPL  DTDG
Sbjct: 510 QEAFKRLTNTIYGLYNHSTFRWYSIECSEAITAWGRDFLQKTMEKSREHGFKPLYADTDG 569

Query: 834 IWCVL 838
            + VL
Sbjct: 570 FYAVL 574


>gi|15679219|ref|NP_276336.1| DNA-dependent DNA polymerase B protein [Methanothermobacter
           thermautotrophicus str. Delta H]
 gi|3913522|sp|O27276.1|DPOL_METTH RecName: Full=DNA polymerase
 gi|2622317|gb|AAB85697.1| DNA-dependent DNA polymerase family B (PolB1) [Methanothermobacter
           thermautotrophicus str. Delta H]
          Length = 586

 Score = 71.6 bits (174), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 91/375 (24%), Positives = 165/375 (44%), Gaps = 56/375 (14%)

Query: 187 LDCIVDLREYDVPYHIRFAIDNDVRC-------GQWYDVSISSTGPLLEKRVDLLQRAE- 238
           L+ + D+RE+D+P++ R+ ID  +         G   D + S T  +  + V++  R + 
Sbjct: 104 LESVRDIREHDIPFYRRYLIDKSIVPMEELEFQGVEVDSAPSVTTDV--RTVEVTGRVQS 161

Query: 239 -------VHVCAFDIETTKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLE 291
                  + + +FDIE  + P   PD + D I+MI  +    GY  +     G+ ++ +E
Sbjct: 162 TGSGAHGLDILSFDIEV-RNPHGMPDPEKDEIVMIG-VAGNMGYESVI-STAGDHLDFVE 218

Query: 292 YTPKPEFEGYFKVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGF 351
                          V +E ELL  +   + + KP I V YN D FD+P++  RAA  G 
Sbjct: 219 V--------------VEDERELLERFAEIVIDKKPDILVGYNSDNFDFPYITRRAAILGA 264

Query: 352 KMSEELGFQCDKNQGECRA-------KFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLG 404
           ++  +LG+   K +   R        K   H+D +  ++R  Y+      L+ V +   G
Sbjct: 265 EL--DLGWDGSKIRTMRRGFANATAIKGTVHVDLYPVMRR--YMNLDRYTLERVYQELFG 320

Query: 405 YDPLEVNPEDMVRF--AKEKPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDE 462
            + +++  + +  +    E    +  YS+ D VAT+ +    + P    L  ++     +
Sbjct: 321 EEKIDLPGDRLWEYWDRDELRDELFRYSLDDVVATHRI-AEKILPLNLELTRLVGQPLFD 379

Query: 463 VLRKGSGTLCEMLLMVQAYKANVICPNK-HQSDPEKFYRNHLLESETYIGGHVECLESGV 521
           + R  +G   E  L+ +AY+   + PNK  QSD               +GG+V+  E G+
Sbjct: 380 ISRMATGQQAEWFLVRKAYQYGELVPNKPSQSDFSS------RRGRRAVGGYVKEPEKGL 433

Query: 522 FRSDLPTSFK-LDPS 535
             + +   F+ L PS
Sbjct: 434 HENIVQFDFRSLYPS 448


>gi|321463641|gb|EFX74655.1| hypothetical protein DAPPUDRAFT_251495 [Daphnia pulex]
          Length = 186

 Score = 71.6 bits (174), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 31/70 (44%), Positives = 50/70 (71%), Gaps = 2/70 (2%)

Query: 1058 VSERAVPVAIFETDAEIMKFYLRKWCKTS--SDVGIRSIVDWSYYKQRLSSAIQKIITIP 1115
            V++RA+ +AIF+++  + + YL+KW K +  +D  IR+I+ W+Y+ +RL   IQKIITIP
Sbjct: 95   VTDRAISLAIFQSEPSVKRHYLKKWLKDNFMTDFDIRTILGWNYHIERLGGCIQKIITIP 154

Query: 1116 AAMQKVSNPV 1125
            AA+Q +  P 
Sbjct: 155  AALQGIQGPT 164


>gi|360044001|emb|CCD81547.1| putative dna polymerase epsilon, catalytic subunit [Schistosoma
            mansoni]
          Length = 825

 Score = 70.9 bits (172), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 46/159 (28%), Positives = 71/159 (44%), Gaps = 38/159 (23%)

Query: 1812 LEFIKHVCAAFALDQNVQHDVLVMRKNLLKYVRVREFAPEAEFRDP-----CP------- 1859
            L+FIK +C   +L+ + +  +  +R +LL+ + V EF+PEA +  P     CP       
Sbjct: 258  LDFIKSLCEVLSLEPSAKLHIESIRHDLLRLINVGEFSPEAIWISPHMIRDCPLNQDPNK 317

Query: 1860 -----------SFILPNVICSYCNDCRDLDLCRDMALL---------------AQDWHCA 1893
                          LP V C  CN  RD+D+CRD+ ++               +  W   
Sbjct: 318  YTFETTAIRSLLIYLPEVACPTCNFTRDIDVCRDIHVVWIMASMDSMHAETRQSGCWAWV 377

Query: 1894 MPQCGQPYDREVMENALLQIVRQRERLYHLQDLVCIRCN 1932
             P C   Y R+ +E AL+Q + Q    + LQDL C +C 
Sbjct: 378  CPHCRTVYPRDKLEEALVQQLEQFSLQHCLQDLQCPKCT 416


>gi|327311462|ref|YP_004338359.1| DNA polymerase II [Thermoproteus uzoniensis 768-20]
 gi|326947941|gb|AEA13047.1| DNA polymerase II [Thermoproteus uzoniensis 768-20]
          Length = 785

 Score = 70.5 bits (171), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 83/374 (22%), Positives = 147/374 (39%), Gaps = 56/374 (14%)

Query: 187 LDCIVDLREYDVPYHIRFAIDNDVRCGQWYDVSISSTGPL------LEKR--VDLLQRAE 238
           LD + ++ E D+ +++R+ +D  V    W+ V +S  G L      L +R  V +L++  
Sbjct: 101 LDGVEEVLEADIRFYMRYMVDVGVTPSTWHLVDVSEEGTLGGLRRYLARRPPVPILEKTG 160

Query: 239 V----HVCAFDIETTKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTP 294
           V     + AFDIE         D   D ++ IS + D  G                    
Sbjct: 161 VLPDLRIAAFDIEVYN-ARGTADPARDPVVTIS-IKDSSG-------------------- 198

Query: 295 KPEFEGYFKVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMS 354
               + +    +  ++ + LR +  +++E  P + + YN + FDWP+L  RA   G  +S
Sbjct: 199 ----KAFAITADGRDDRKALREFVEYVREYDPDVILGYNSNGFDWPYLAERAKRLGVALS 254

Query: 355 EELGFQCDKNQGECRAKFACHLDCFAWVKRDSY-LPQGSQGLKAVTKAK-------LGYD 406
                  D+  G  +     H         D Y +    Q +K  T  +       +  D
Sbjct: 255 ------VDRLGGAPQQSVYGHWSVVGRANVDLYNVIDEIQEIKVKTLDRAAEYFGVMKRD 308

Query: 407 PLEVNPEDMVRFAKEKPQ---MMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEV 463
              + P   +    + P    +   Y++ DAV+TY L    + P++  L+++  +  D+V
Sbjct: 309 ERTLIPGHRIYEYWDDPSRRPIFIKYAIEDAVSTYGLGEKLL-PYLIQLSSVSGVPLDQV 367

Query: 464 LRKGSGTLCEMLLMVQAYKANVICPNKHQSDPEKFYRNHLLESETYIGGHVECLESGVFR 523
                G   E LLM  AY+   + PN+ +   E +    +LE    I   V  L+     
Sbjct: 368 AAASVGARVEWLLMRYAYRMGEVAPNREERPYETYKGAIVLEPRPGIYQDVAVLDFTSMY 427

Query: 524 SDLPTSFKLDPSAY 537
             +   + L P  Y
Sbjct: 428 PSIMMKYNLSPDTY 441


>gi|385805456|ref|YP_005841854.1| family B-type DNA polymerase [Fervidicoccus fontis Kam940]
 gi|383795319|gb|AFH42402.1| family B-type DNA polymerase [Fervidicoccus fontis Kam940]
          Length = 799

 Score = 70.1 bits (170), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 100/483 (20%), Positives = 193/483 (39%), Gaps = 103/483 (21%)

Query: 82  YKFRPYFYA-----ATKEKMEMDVEAYLRRRYESQIADIEILEKEDLDLKNHLSGLHKSY 136
           ++F+PYFYA     +  EK++ +V   +RR+     A +E++EK+       L G     
Sbjct: 43  WRFKPYFYAILEEESNIEKVKNEVLTLVRRKEPK--ASVELVEKK-------LYGKPVKA 93

Query: 137 LKISFDTVQQLMDVKKDLLHVVERNQAKFDAAEAYESILTGKREQRPQDFLDCIVDLREY 196
           LKI     +Q+ +V+  + +V                                + D+ E 
Sbjct: 94  LKIIMMIPEQVREVRDRVKNV------------------------------PMVKDVLEA 123

Query: 197 DVPYHIRFAIDNDVRCGQWYDVSISSTGP----------LLEKRVDLLQRA---EVHVCA 243
           D+ + +R+ ID D++  +WY V +               +LE  ++L   A    +    
Sbjct: 124 DIRFSMRYMIDKDIKPFRWYKVPVREVSKKKYRSAKIYEVLEDPIELEAEASFPSLKTMV 183

Query: 244 FDIETTKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFK 303
           FDIE        P  + D I++I  M  G       ++   E+ +D E   K        
Sbjct: 184 FDIEVYST-TGSPRPEKDPIIIIGLMDGGL------KQFYSENKDDKETIKK-------- 228

Query: 304 VTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKM--SEELGFQ- 360
                        +   +Q++ P I   YN + FDW +L  RA ++G  +  + E+G   
Sbjct: 229 -------------FIEEVQKIDPDIISGYNINVFDWNYLLQRAKYNGLNLDVTREIGKSP 275

Query: 361 CDKNQGECRAKFACHLDCFAW------VKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPED 414
                G        ++D F +      VKR + L   S+ +  + K     + + +   D
Sbjct: 276 ATSTAGHISVAGRLNVDIFDFAQEISEVKRKT-LEDISEYMGVMKKD----ERVLLEWYD 330

Query: 415 MVRF---AKEKPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTL 471
           + +     KE  + +  Y+  D ++TY L M    PF   L+ +  +  D+++    G  
Sbjct: 331 IPKLWDTGKEGREKVLRYNRDDVISTYRL-MEKFLPFGIQLSGLTGIPLDQLMATSVGYR 389

Query: 472 CEMLLMVQAYKANVICPNKHQSDPEKFYRNHLLESETYIGGHVECLESGVFRSDLPTSFK 531
            E  L+ +AY+ N I PN+ + + E +    +L+ ++ +  ++  L+      ++   + 
Sbjct: 390 LEYYLIRKAYRFNEIVPNREERERESYKGAIVLKPKSGVHENIAVLDFASMYPNIMIKYN 449

Query: 532 LDP 534
           + P
Sbjct: 450 VGP 452



 Score = 41.2 bits (95), Expect = 6.9,   Method: Compositional matrix adjust.
 Identities = 54/201 (26%), Positives = 75/201 (37%), Gaps = 51/201 (25%)

Query: 772 DSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDT 831
           D  Q A K + N+ YGY+  +GARWY  E A  +T  G    QN    IEK  K L LD 
Sbjct: 514 DERQKAIKVLANASYGYMGWQGARWYCKECAEAITAWGR---QNITFAIEK-AKKLGLD- 568

Query: 832 DGIWCVLPGSFPENFT-FKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTY 890
                V+ G     F  F  K + + L I                               
Sbjct: 569 -----VIYGDTDSLFVQFDEKKINELLNI------------------------------- 592

Query: 891 ETHSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKL 950
             +SE  +E ++D  YK +    +       KKRY     D  + ++ GFE  R    ++
Sbjct: 593 -INSELGLEIKIDKIYKKLFFTEA-------KKRYVGITIDNII-DIVGFEAIRGDWSEI 643

Query: 951 IKVFQAELFDKFLHGSTIEEC 971
            K  Q E+    L   T E+ 
Sbjct: 644 SKDIQTEIARLILEKGTTEKA 664


>gi|336121549|ref|YP_004576324.1| DNA polymerase Pol2 [Methanothermococcus okinawensis IH1]
 gi|334856070|gb|AEH06546.1| DNA polymerase Pol2 [Methanothermococcus okinawensis IH1]
          Length = 810

 Score = 70.1 bits (170), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 119/510 (23%), Positives = 212/510 (41%), Gaps = 120/510 (23%)

Query: 65  CIDLYFVSQDGSTFKSKYKFRPYFY--AATKEKMEMDVEAYLRRRYESQIADIEILEKED 122
           CI LY +++     K +  F+PYFY  A TKE                 I D  +   ++
Sbjct: 15  CIYLYLINK---VLKER-DFKPYFYVDATTKE-----------------INDF-LSNDDN 52

Query: 123 LDLKNHLSGLHKSYLKISFDTVQQLMDVKKDLLHVVERNQAKFDAAEAYESILTGKREQR 182
            +L N++  L +S  KI  ++   L D K     ++ERN  K                + 
Sbjct: 53  KNLLNYVENL-ESVRKIIINS--NLNDSKN---RIIERNFTKITV-------------RY 93

Query: 183 PQDF-----LDCIVDLREYDVPYHIRFAIDNDVRCGQWYD--------VSISSTGPLLEK 229
           P+D      L  + ++ E+D+P+  R+ ID+D+    +Y+          I++  P    
Sbjct: 94  PKDVPKLRVLKELGEIYEHDIPFTKRYLIDSDIIPTTYYNNFEDKNRRTIINNNLP---- 149

Query: 230 RVDLLQRAEVHVCAFDIETTKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIED 289
                   E+   +FD+E      + P+ + + I+M S+             C  +D++ 
Sbjct: 150 --------ELKTISFDMEVY-CEGREPNPEKNPILMTSF-------------C-SKDLKK 186

Query: 290 LEYTPKPEFEGYFKVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHH 349
           +  T KP    Y ++  V +E EL++     +++    I  TYNGD FD+P+L+ RA + 
Sbjct: 187 V-ITYKPFKHKYMEL--VKDESELIKRTIDILKDY--DIIYTYNGDNFDFPYLKRRAENL 241

Query: 350 GFKM----------SEELGFQCDKNQGECRAKFA-------------CHLDCFAWVKRDS 386
           G  +            E+G +    + + + K +              H+D +   +R  
Sbjct: 242 GINVFFDKTGNDDKKTEIGKKTKTQKHKQKIKISRGGIHLRSYIPGKVHIDLYPIARRT- 300

Query: 387 YLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQMMASYSVSDAVATYYLYMTYVH 446
            L   +  L+ V+    G   LEV  +++        + +  YS  DA  TY +   Y  
Sbjct: 301 -LNLTTYKLEDVSYELFGVHKLEVGHQNISNLWNNMDKNLVEYSFQDAYYTYKI-GEYFL 358

Query: 447 PFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVICPNKHQSDPEKFYRNHLLES 506
           P     + I+  +  EV R GS  + E LL+  ++K N + PN+  +   + Y+  L   
Sbjct: 359 PLEVMFSRIVNQTLFEVSRMGSSQMVEYLLLKHSFKNNFLAPNRPSN---REYQKRL--R 413

Query: 507 ETYIGGHVECLESGVFRSDLPTSFK-LDPS 535
           E Y GG+V+    G+  + +   F+ L PS
Sbjct: 414 EYYEGGYVKEPIKGMHENIVSMDFRALYPS 443



 Score = 64.7 bits (156), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 90/347 (25%), Positives = 144/347 (41%), Gaps = 80/347 (23%)

Query: 727  TVRSFRDRRYEYKGLNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHKCILNSFY 786
             +R+  +RR   K + K+ K K +E K   NS   +   +   L +  Q + K + NS Y
Sbjct: 483  VLRNLIERR---KTIKKILKEKDTEKKEL-NSKNNKYYNEYYKLLNYEQKSLKILANSHY 538

Query: 787  GYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIG-KPLELDTDGIWCVLPGSFPEN 845
            GY+    ARWYS E A V+T+ G   IQ      EK G K +  DTDG++ VL       
Sbjct: 539  GYMAYPRARWYSKECAEVITHLGRTYIQKTIEEAEKYGFKVIYADTDGLYAVL------- 591

Query: 846  FTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECS------IE 899
                                        N N   +TL++   KTYE  ++ +      +E
Sbjct: 592  ----------------------------NENSDKKTLLN---KTYEFLNKINEKLPKDME 620

Query: 900  FEVDGPYKAMILPASKEEGILI-KKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAEL 958
             E +G YK          GI I KKRYA+ +++  +  +KG E  RR    + K  Q  +
Sbjct: 621  LEFEGYYK---------RGIFITKKRYALIDENDKIT-IKGLEFVRRDWSNIAKKTQKAV 670

Query: 959  FDKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMS--KSLADYG 1016
             +  L    +E+  + +  +      + D +   I   +LI Y   +  ++  K+ A + 
Sbjct: 671  LEILLKEGNVEKAKNIIKNI------ITDLKNGKIDKKDLIIYTQLTKDINEYKTTAPHV 724

Query: 1017 EQKSCAVTTARRLSDFLGDTMVKDKGLRCQYIVACEPQGTPVSERAV 1063
            E     +    RL+  +GD +         YI+    +   +SERAV
Sbjct: 725  EVAKKILKKGGRLN--IGDVI--------GYIITSGNKS--ISERAV 759


>gi|268324246|emb|CBH37834.1| DNA polymerase [uncultured archaeon]
          Length = 829

 Score = 70.1 bits (170), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 123/530 (23%), Positives = 212/530 (40%), Gaps = 103/530 (19%)

Query: 44  GWLLTFASSSLEDE-DTRKVYSCIDLYFVSQDGSTFKSKYK-FRPYFYAATKEKMEMDVE 101
           G+LL     + +DE  T K    I L+  S++G+ F    K F PYFYA +      D+E
Sbjct: 5   GFLLDIDYITEKDEKGTEK--PVIRLWCKSEEGTDFIVLDKNFEPYFYAFSSSPKSHDIE 62

Query: 102 AYLRRRYESQIADIEILEKEDLDLKNHLSGLHKSYLKISFDTVQQLMDVKKDLLHVVERN 161
              R     QI +I I  +++      +    K +L ++                   +N
Sbjct: 63  GKKR-----QIEEIAIAREDEAIRVTRVEFCQKKFLGVN-------------------QN 98

Query: 162 QAKFDAAEAYESILTGKREQRPQDFLDCIVDLREYDVPYHIRFAIDNDVRC-------GQ 214
             K  A+      L   RE   +  L  +    E D+ + IR+ ID  +R        G+
Sbjct: 99  GLKIFASHPRHVPLL--REAVSRVGLTVL----EADILFAIRYLIDKQLRPFDGVIVEGE 152

Query: 215 WYDVSISST---GPLLEKRVDLLQRAEVHVCAFDIE-TTKLPLKFPDADYDIIMMISYML 270
             ++S  +      ++  ++D+L    + + AFD E  T+     P    D I++IS   
Sbjct: 153 GVELSYGTAILASKVIYNKMDVL--PTLKILAFDCEMATQGGYGMPSPARDPIIIISVAY 210

Query: 271 DGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNVNNEIELLRLWFAHMQEVKPGIYV 330
             +G  + ++  V   I+D +Y                ++ +LLR +   +  ++P I V
Sbjct: 211 Y-EGEEVKSKLFV---IDDEDYAR-------------GDDEKLLRDFLDFVGHLQPNIIV 253

Query: 331 TYNGDYFDWPFLETRAAHHGFKM-----SEELGFQCDKNQGECRAKFACHLDCFAWVKRD 385
            YN D FDWP++  RA  +G ++        + F+          +   ++D F   KRD
Sbjct: 254 GYNSDGFDWPYIRERAKLYGLRLRMGADGSTVRFEKGGALPGVNIRGRLNVDLFKLAKRD 313

Query: 386 ------SYLPQGSQGLKAVTKA-KLGYDPLEVNPEDMVRFAKEKPQMMASYSVSDAVATY 438
                   L   ++ L  V K  ++   P E+N       A+E+   +  Y+ +DAV+  
Sbjct: 314 LDSVKVKKLENVAEFLGVVRKTERVNLSPREINESWFNASARER---LYEYAKADAVSAL 370

Query: 439 YLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVICPNKHQSDPEKF 498
            +  T + P    L+ ++    DE+ + G G   E  L  +A+K   + P K  S+    
Sbjct: 371 GI-ATKMLPLQIELSKMVGYPLDELAKMGRGRQVEAFLTAEAFKRGELVPPKGGSE---- 425

Query: 499 YRNHLLESETYIGGHVECLESGV--------FRSDLPT---SFKLDPSAY 537
                   +T+ GG V   E G+        F S  PT   SF + P  +
Sbjct: 426 --------KTFEGGFVLPPEKGLHEDVIALDFSSMYPTIMISFNISPDTF 467



 Score = 50.8 bits (120), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 68/309 (22%), Positives = 124/309 (40%), Gaps = 56/309 (18%)

Query: 763  EAQDMVVLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEK 822
            +A D   L D  Q + K + NSFYGY     A++Y  E A   T  G   I+ A  + E+
Sbjct: 519  KASDEYRLLDIQQQSVKILTNSFYGYTGWSAAKFYKRECAEATTAWGRHFIKRAVKMAEE 578

Query: 823  IG-KPLELDTDGIWCVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQT 881
             G K +  DTD I+   P                          L V+       D+ + 
Sbjct: 579  SGFKVIYGDTDSIFVKFP--------------------------LEVE------GDRKKA 606

Query: 882  LVDPVSK-TYETHSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGF 940
            +++   + +     E  +E  +   +K +            KKRYA   D G +  ++G 
Sbjct: 607  ILEKAEEISARITKELPLELALQDFFKTIFFTGK-------KKRYAALTDTGEIV-VRGL 658

Query: 941  EIKRRGELKLIKVFQAELFDKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELID 1000
            E++R    +L K  Q E+ +  L     E+  + V +V      + D +  ++   +LI 
Sbjct: 659  EVRRGDWCELAKEVQTEVIELILRDKDPEKAMAYVKSV------IKDLERGNLPVHKLII 712

Query: 1001 YISESSTMSKSLADYGEQKSCAVTTARRLSDFLGDTMVKDKGLRCQYIVACEPQGTPVSE 1060
            Y     T+++ ++ Y  +++  +   + L+      +  + G +  Y++      T  S+
Sbjct: 713  Y----KTLTRKISAYDTKQAHVIAAEKALAS--SSHIAYEVGSKVPYVILKGAGKT--SD 764

Query: 1061 RAVPVAIFE 1069
            RA P+ I E
Sbjct: 765  RAFPIDIME 773


>gi|119719310|ref|YP_919805.1| DNA polymerase II [Thermofilum pendens Hrk 5]
 gi|119524430|gb|ABL77802.1| replicative DNA polymerase I [Thermofilum pendens Hrk 5]
          Length = 794

 Score = 69.7 bits (169), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 115/556 (20%), Positives = 216/556 (38%), Gaps = 103/556 (18%)

Query: 58  DTRKVYSCIDLYFVSQDGSTFKSKYK-FRPYFYAATKEKMEMDVEAYLRRRYESQIADIE 116
           D  K +  I L+ +++ G       K FRPYFY       E  +   L  R  + +   +
Sbjct: 19  DVVKGHPVIYLWGITESGERIVVAEKNFRPYFYLVP----ENAISDALVERVRTALHTFK 74

Query: 117 ILEKEDLDLKNHLSGLHKSYLKISFDTVQQLMDVKKDLLHVVERNQAKFDAAEAYESILT 176
           +L    ++ K  L G   + LK+   T+    DV K          A+  AA+       
Sbjct: 75  VLSVNAIERK--LFGRTLNVLKV---TITDPRDVPK----------AREVAAK------- 112

Query: 177 GKREQRPQDFLDCIVDLREYDVPYHIRFAIDNDVRCGQWYDVSISSTG-----------P 225
                     +  I D+ E D+ +++R+ +D  +    W    + S              
Sbjct: 113 ----------IPGIRDVLEADIRFYMRYMVDTGISPSSWVLAKVRSAPVPNGWRVDEFFE 162

Query: 226 LLE--KRVDLLQRAEVHVCAFDIETTKLPLKFPDADYDIIMMISYMLDGQGYLIINRECV 283
           L+E  + +D      +   AFDIE        PD + D +++IS   +  G +I +++  
Sbjct: 163 LVEAPRSLDKKSTPRLKTYAFDIECYNR-YGEPDPERDPVLVISRTGE-DGTVIFSQD-- 218

Query: 284 GEDIEDLEYTPKPEFEGYFKVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLE 343
                          EG       ++E +LL  +   + +  P + + YN + FDWP+L 
Sbjct: 219 ---------------EG-------SSEKKLLEEFVNDLVQYDPDVILGYNSNRFDWPYLL 256

Query: 344 TRAAHHGFKMSEELGFQCDKNQGECRAKFACHLDCFAWVKRDSY-------------LPQ 390
            RA  +G K+S        +N GE       H         D Y             L  
Sbjct: 257 QRARVNGVKLS------IGRNLGEPSQSVYGHFSVVGRANVDLYDYASELQEVKVKTLEN 310

Query: 391 GSQGLKAVTKAKLGYDPLEVNPEDMVRF--AKEKPQMMASYSVSDAVATYYLYMTYVHPF 448
            S+ L  + K+    + + ++   +  +  +K+K  ++  Y+  DA +TY L    V PF
Sbjct: 311 VSEFLGVMKKS----ERVLIDTNKVYEYWDSKDKRSLLLRYAGDDARSTYLLGQV-VLPF 365

Query: 449 IFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVICPNKHQSDPEKFYRNHLLESET 508
              L++++ +  D+V     G   E  L+ QA+  N + PN  +   E +    +L+ + 
Sbjct: 366 GIQLSSLVGLPLDQVFAASVGNRVEWFLIRQAFVFNELVPNSRERGEETYKGAIVLKPKP 425

Query: 509 YIGGHVECLESGVFRSDLPTSFKLDPSAYEQLLNNLD-RDLQYAIKVEGKMDLESVSNYD 567
            +   +  L+      ++   + + P  Y     ++D  ++  A +V  +        Y 
Sbjct: 426 GVHKKIAVLDFSSMYPNIMIKYNISPDTYVPPEEHVDPSEVWVAPEVGHRFRKHPPGFYR 485

Query: 568 EVKNAIMEKLLRLQEE 583
           +V  +++E   RL+E+
Sbjct: 486 KVLESLLEARRRLREK 501


>gi|305662963|ref|YP_003859251.1| replicative DNA polymerase I [Ignisphaera aggregans DSM 17230]
 gi|304377532|gb|ADM27371.1| replicative DNA polymerase I [Ignisphaera aggregans DSM 17230]
          Length = 801

 Score = 69.3 bits (168), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 83/365 (22%), Positives = 153/365 (41%), Gaps = 58/365 (15%)

Query: 195 EYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLLEKRVD-------LLQRAE------VHV 241
           E D+ + +R+ IDND+    W+   +       E RVD       +L R E      + V
Sbjct: 122 EADIRFSMRYLIDNDIYPCTWHRFRVVERPRSGEYRVDAEYEVIDILHRVEEFVPPRLRV 181

Query: 242 CAFDIETTKLPLKFPDADYDIIMMIS-YMLDGQGYLIINRECVGEDIEDLEYTPKPEFEG 300
            AFDIE    P   P A+ D I++IS Y  DG               E +E+T       
Sbjct: 182 LAFDIEVYN-PRGIPKANKDPIIIISLYNSDG---------------EYIEFT------- 218

Query: 301 YFKVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKM--SEELG 358
                N  ++  L++ +  ++ +  P I V YN + FDWP+L  R+   G K+  S   G
Sbjct: 219 ----ANDKDDRNLIKSFIDYVLKYDPDIIVGYNSNRFDWPYLIERSRFLGIKLDVSRRRG 274

Query: 359 FQCDKN-QGECRAKFACHLDCFAWVKRDS-----YLPQGSQGLKAVTKAKLGYDPLEVNP 412
            +   +  G        ++D + + +  S      L + ++ L  + K++    P     
Sbjct: 275 VEPSPSVHGHISVPGRLNVDLYDFAEEMSEIKIKSLDEVAEYLGVMKKSERTNVPW---- 330

Query: 413 EDMVRF---AKEKPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSG 469
            ++ R+    K +P ++  Y+  DA++TY +    + PF   L+++  +  D+V     G
Sbjct: 331 YEIYRYWDDEKLRP-ILLRYARDDAISTYGI-AEKILPFAIQLSSVTGIPLDQVGTASVG 388

Query: 470 TLCEMLLMVQAYKANVICPNKHQSDPEKFYRNHLLESETYIGGHVECLESGVFRSDLPTS 529
              E  L+  AY  + + PN+ + + E +    +LE +  +   +  L+       +   
Sbjct: 389 FRLEWFLIRIAYMRDELVPNRIEREYEPYRGAIVLEPKKGVHEDIAVLDFSAMYPSIMMK 448

Query: 530 FKLDP 534
           + + P
Sbjct: 449 YNIGP 453


>gi|392551187|ref|ZP_10298324.1| DNA polymerase II [Pseudoalteromonas spongiae UST010723-006]
          Length = 780

 Score = 68.9 bits (167), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 54/200 (27%), Positives = 89/200 (44%), Gaps = 25/200 (12%)

Query: 772 DSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIG-KPLELD 830
           +++  A K I+NSFYG +   G R+Y   ++  +T  G +I++  + LIE+ G + +  D
Sbjct: 486 ETMSYAIKIIMNSFYGVLGSTGCRFYDPRLSSSITMRGHEIMKKTKQLIEQAGYQVIYGD 545

Query: 831 TDGIWCVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTY 890
           TD  +  + G   E       D+ K+L               N  N  +Q      ++  
Sbjct: 546 TDSTFVSIDG---EACKATCNDIGKQLV--------------NKINSYWQ------AELS 582

Query: 891 ETHSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKL 950
           E   + ++E E +  Y+   +P  + E    KKRYA  N  G L   KG E  R    +L
Sbjct: 583 EKGLDSALEIEFETHYQPFFMPTLRGETTGSKKRYAGINQAGELI-FKGLEAARGDWTRL 641

Query: 951 IKVFQAELFDKFLHGSTIEE 970
            K FQ EL+ +      ++E
Sbjct: 642 AKEFQTELYQRLFSNQAVDE 661


>gi|389860533|ref|YP_006362772.1| DNA polymerase family B [Thermogladius cellulolyticus 1633]
 gi|388525436|gb|AFK50634.1| DNA polymerase family B [Thermogladius cellulolyticus 1633]
          Length = 800

 Score = 68.2 bits (165), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 104/503 (20%), Positives = 190/503 (37%), Gaps = 102/503 (20%)

Query: 68  LYFVSQDGSTFKSK-YKFRPYFYAATKEKMEMDVEAYLRR---RYESQIADIEILEKEDL 123
           +Y V++DG     +  +FRPYFY       + D  A   +      S I D+ +++K+  
Sbjct: 23  IYGVTRDGRRVVLRDRRFRPYFYVVLSPDADPDTVAKKIKALSETSSPIIDVSVVDKK-- 80

Query: 124 DLKNHLSGLHKSYLKISFDTVQQLMDVKKDLLHVVERNQAKFDAAEAYESILTGKREQRP 183
                            F    + + V   +   V R + K    +    +L        
Sbjct: 81  ----------------YFGRPVKALKVTTVIPESVRRYREKVKGVQGVAYVL-------- 116

Query: 184 QDFLDCIVDLREYDVPYHIRFAIDNDVRCGQWY---------------DVSISSTGPLLE 228
                      E D+ + +R+ +D+ +R   W+               D     TGP+ E
Sbjct: 117 -----------EADIRFSLRYVLDHGLRPCGWHVAEVTEIPKKPGLRVDAEYEVTGPI-E 164

Query: 229 KRVDLLQRAEVHVCAFDIET-TKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDI 287
              D     ++ + AFDIET TK     P    D +++I  M D +G L   R    + +
Sbjct: 165 SLEDSTPPRDLRILAFDIETYTKT--GSPKPSQDPVIIIGVMND-KGEL---RSFTSDGL 218

Query: 288 EDLEYTPKPEFEGYFKVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAA 347
           +D +                     +++ +  ++QE  P I V YN D FDWP+L  RA 
Sbjct: 219 DDKK---------------------VIQEFVKYVQEYDPDIIVGYNSDAFDWPYLLERAK 257

Query: 348 HHGFKM--SEELGFQCDKNQ-GECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLG 404
             G K+  +  LG +   +  G    +   ++D + + +    +P+       V    LG
Sbjct: 258 RVGVKLEVTRRLGVEPQTSTYGHVSIQGRLNVDLYRFAEE---IPEIKVKSLDVVAEYLG 314

Query: 405 YDPLEVNPEDMVRFA--------KEKPQMMASYSVSDAVATYYLYMTYVHPFIFSLATII 456
              ++ +   +V +           K  ++  Y+  D  +T  L   ++ PF   L+ + 
Sbjct: 315 V--MKRSERTLVEYTDFPKYWDDPSKRGVLVKYNQDDVRSTMGLAEKFL-PFAMQLSYVT 371

Query: 457 PMSPDEVLRKGSGTLCEMLLMVQAYKANVICPNKHQSDPEKFYRNHLLESETYIGGHVEC 516
            +  D+V     G   E  LM +A KA  + PN+ + + E +    +L+    I  +V  
Sbjct: 372 RLPLDQVGAASVGNRLEWFLMYEAMKAGELIPNREEKEAEPYKGAVVLQPVRGIHDNVAV 431

Query: 517 LESGVFRSDLPTSFKLDPSAYEQ 539
           L+      +L   + + P   E+
Sbjct: 432 LDFSSMYPNLMIKYNVGPDTIER 454



 Score = 42.0 bits (97), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 27/68 (39%), Positives = 34/68 (50%), Gaps = 1/68 (1%)

Query: 770 LYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIG-KPLE 828
           + D  Q A K + N+ YGY+   GARWY  E A  VT  G   I N     E +G K + 
Sbjct: 511 ILDERQRAIKILANATYGYMGWVGARWYCRECAEAVTAWGRATITNVIKYAEGLGLKVIY 570

Query: 829 LDTDGIWC 836
            DTD I+ 
Sbjct: 571 GDTDSIFV 578


>gi|109099595|ref|XP_001117875.1| PREDICTED: DNA polymerase epsilon catalytic subunit A-like [Macaca
            mulatta]
          Length = 204

 Score = 67.4 bits (163), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 54/190 (28%), Positives = 88/190 (46%), Gaps = 37/190 (19%)

Query: 1180 DLEDFPKKRRNSVNGPRPIVRCFEVNNEQKTVKTTDQVDSLRQQLEPS----EVSDQQPS 1235
            D+EDF       V  P P      V  ++K V    Q +S  Q L P+    E+  Q P 
Sbjct: 15   DMEDF-----GLVKPPHPAA---PVAVKRKRVLWESQEES--QDLTPTVPWQEILGQPP- 63

Query: 1236 SQNAIDTENIDRIVDYKGWLELKKRKW----KDNLDRRKKQKLGSLRASHQANGVSESLG 1291
               A+ T   + +V    WL   K+KW    +  L RRK+Q+L S     +   + +   
Sbjct: 64   ---ALGTTQEEWLV----WLRFHKKKWQLQARQRLARRKRQRLESAEGVLRPGAIRDGPA 116

Query: 1292 DMINHKEAQRRTGVGSYFRRQETAMTRCHWQIIQLVPSSQSGVFLAWVVVEGIMVRIPIT 1351
                       TG+GS+ RR   ++    WQI+Q+  +SQ+G+F  W ++   +  I ++
Sbjct: 117  -----------TGLGSFLRRTARSILDLPWQIVQISETSQAGLFRLWALIGSDLHCIRLS 165

Query: 1352 VPRLFYLNSK 1361
            +PR+FY+N +
Sbjct: 166  IPRVFYVNQR 175


>gi|78185897|ref|YP_373940.1| DNA-directed DNA polymerase B [Chlorobium luteolum DSM 273]
 gi|78165799|gb|ABB22897.1| DNA-directed DNA polymerase B [Chlorobium luteolum DSM 273]
          Length = 792

 Score = 67.0 bits (162), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 90/383 (23%), Positives = 149/383 (38%), Gaps = 86/383 (22%)

Query: 715  GICMRENSFYV--DTVRSFRDRRYEYKGLNKVWKGKLSEAKASGNSIKIQEAQDMVVLYD 772
            G+C + +S  V    +   R+ R + K L         E K  GN+        +   YD
Sbjct: 442  GVCPKSDSLKVFPGVLGDLRELRLKAKALA-------GEEKRMGNT-------SLAANYD 487

Query: 773  SLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIG-KPLELDT 831
            ++Q + K ++N+ YGY+   G  +   + A  VT TG  I +      E  G + +E+DT
Sbjct: 488  AMQGSFKILINAMYGYLGFSGGLFNDFDEADRVTSTGQSIAKKMIREFESRGCRIIEVDT 547

Query: 832  DGIWCVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYE 891
            DGI  + P S                                 +  + + LV  VS+   
Sbjct: 548  DGILFIPPDSV-------------------------------KSEAEERALVQDVSELMP 576

Query: 892  THSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLI 951
                  I    DG ++ MI          +KK YA+ + +G + ++KG  +  R   K  
Sbjct: 577  D----GINIGFDGRFRKMI--------SYLKKNYALLDYNGIM-KMKGSSLTSRSGEKFG 623

Query: 952  KVFQAELFDKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKS 1011
            + F    F++ L      E  + +  +   + + + N G DI D       S + +M  S
Sbjct: 624  RDFIRRGFEQLL-----AEDITGLHDLYREYRNKILNHGLDITD------FSRTESMKSS 672

Query: 1012 LADYGEQKSCAVTTARRLSDFLGDTMVKD-----KGLRCQYIVACEPQGTPVSERAVPVA 1066
            L  Y E     V + +R      +T ++      KG R  Y +A   QG   S+R  P A
Sbjct: 673  LEQYRED----VASGKRSKSITYETAIRSAIMVTKGDRITYYIAGTGQGGAASDRGKPAA 728

Query: 1067 IFETDA--EIMKFYLRK---WCK 1084
             +  D   E   FYL++   +C+
Sbjct: 729  EWSRDKPDENTSFYLKRLDEYCQ 751


>gi|321459076|gb|EFX70134.1| hypothetical protein DAPPUDRAFT_257508 [Daphnia pulex]
          Length = 171

 Score = 67.0 bits (162), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 33/52 (63%), Positives = 37/52 (71%), Gaps = 7/52 (13%)

Query: 418 FAKEKPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSG 469
            + E+PQ+MA YSVSD V       T VH FIF+L TIIPM PDEVLRKGSG
Sbjct: 1   MSAEQPQVMAKYSVSDVV-------TKVHTFIFALCTIIPMEPDEVLRKGSG 45


>gi|372266552|ref|ZP_09502600.1| DNA polymerase II [Alteromonas sp. S89]
          Length = 793

 Score = 66.2 bits (160), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 86/345 (24%), Positives = 141/345 (40%), Gaps = 56/345 (16%)

Query: 652 DYYHLKKQIESEFVDGTNGHLSK-SFLDLPKMEQQSRLKDRLKKYCQKAYKR--VLD-KP 707
           DY  L+ Q+    +D + G ++  + L LPK+ +   +   L      A     V+D +P
Sbjct: 346 DYLRLRAQLTGLELDRSGGSVAAFTNLYLPKLHRSHYVAPNLPADGGLASPGGYVMDSRP 405

Query: 708 VTELREAGICMRENSFYVDTVRSFR-DRRYEYKGLNKVWKGKLSEAKASGNSI----KIQ 762
              L +  + +   S Y   +R+F+ D     +GL    KG++ E +A  N+I      +
Sbjct: 406 --GLYDNVLVLDFKSLYPSIIRTFKIDPMGLVEGLADGEKGEVEEGRADENTIPGFRGAR 463

Query: 763 EAQDMVVLYDSL------------------QLAHKCILNSFYGYVMRKGARWYSMEMAGV 804
            ++D   L D +                    A K I+NSFYG +   G R+Y   +A  
Sbjct: 464 FSRDKHFLPDIITNLWAQRDIAKQEQDAARSQAIKIIMNSFYGVLGSGGCRFYDTRLASS 523

Query: 805 VTYTGAKIIQNARLLIEKIG-KPLELDTDGIWCVLPGS-FPENFTFKTKDLKKKLTISYP 862
           +T  G +I+Q     IE++G + +  DTD  +  L G   PE      K+L  ++   + 
Sbjct: 524 ITLRGHEIMQQTASWIEELGHQVIYGDTDSTFVWLSGQPRPEEADAIGKNLADEMNTRW- 582

Query: 863 CVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEFEVDGPYKAMILPASKEEGILIK 922
                    +N   D+   +             C +E E +  Y+  ++P  +      K
Sbjct: 583 ---------QNKLKDELALV-------------CELELEFETHYQRFLMPTIRGSEAGSK 620

Query: 923 KRYA--VFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFLHG 965
           KRYA  V N D      KG E  R    +L K FQ +L+    HG
Sbjct: 621 KRYAGLVVNGDKEKLVFKGLETVRSDWTELAKQFQTKLYAMVFHG 665


>gi|15922397|ref|NP_378066.1| DNA polymerase II [Sulfolobus tokodaii str. 7]
 gi|342306638|dbj|BAK54727.1| DNA polymerase [Sulfolobus tokodaii str. 7]
          Length = 781

 Score = 66.2 bits (160), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 77/327 (23%), Positives = 136/327 (41%), Gaps = 57/327 (17%)

Query: 195 EYDVPYHIRFAIDNDVRCGQWYDVSISST--GPLLEKRVDLLQR---------AEVHVCA 243
           E D+ +++R++IDN+++   W +  +          K+V  L++          E+ V A
Sbjct: 117 EADIRFYMRYSIDNNLKPFYWIEAEVEEIKENNFRVKKVYELKKINKLYEDKIPELKVLA 176

Query: 244 FDIETTKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFK 303
           FDIE        P+   D +++I       G     ++ + +  +DL             
Sbjct: 177 FDIEVYN-KYGSPNPRRDPVIIIGVWTKEGG-----KQFLADKYDDLR------------ 218

Query: 304 VTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDK 363
                     +R +   +Q   P I V YN + FDWP+L  RA   G ++  ++G + + 
Sbjct: 219 ---------AIREFINFVQTYDPDIIVGYNINNFDWPYLLERANIRGIRL--DVGRRVN- 266

Query: 364 NQGECRAKFACHLDCFAWVKRDSY-LPQGSQGLKAVTKAKLGYDPLEVNPE--------- 413
             GE       H      +  D Y   Q  Q +K  T   +  D L V P+         
Sbjct: 267 --GEPSQGVYGHYSITGRLNVDLYGFAQSIQEVKVKTLENIA-DYLGVLPKEKRTIVEWY 323

Query: 414 DMVRF--AKEKPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTL 471
           D+ ++   ++K  ++  Y++ DA + Y L   ++ PF   L  I  +  D++     G  
Sbjct: 324 DIPKYWDDEKKRDILLKYNLDDAKSAYLLGEVFI-PFGIELTRISGLPLDQLSMASVGHR 382

Query: 472 CEMLLMVQAYKANVICPNKHQSDPEKF 498
            E LLM +AYK N + PNK + + E +
Sbjct: 383 VEWLLMREAYKYNELIPNKEEREYESY 409



 Score = 53.9 bits (128), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 56/208 (26%), Positives = 83/208 (39%), Gaps = 52/208 (25%)

Query: 772 DSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKII-QNARLLIEKIGKPLELD 830
           D+ Q A K + N+FYGY+   GARWYS E A  VT  G +II ++A++  EK    +  D
Sbjct: 504 DARQRALKVMANAFYGYMGWLGARWYSKEGAEAVTAWGRQIISESAKIAKEKGFTVIYGD 563

Query: 831 TDGIWCVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTY 890
           TD I+    G           D+   +T                                
Sbjct: 564 TDSIFVKGGG-----------DINSLIT-------------------------------- 580

Query: 891 ETHSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKL 950
           E  S+  +E ++D  YK +    +       KKRYA   +DG + ++ GFE  R     L
Sbjct: 581 EISSKFGLEIKIDKIYKRVFFTEN-------KKRYAGLTEDGKI-DIVGFEAVRGDWCDL 632

Query: 951 IKVFQAELFDKFLHGSTIEECYSAVAAV 978
            K  Q  + +  L    +E+    V  V
Sbjct: 633 AKQVQTNVIELILKSGKVEDAIKYVKTV 660


>gi|325957994|ref|YP_004289460.1| DNA polymerase B region [Methanobacterium sp. AL-21]
 gi|325329426|gb|ADZ08488.1| DNA polymerase B region [Methanobacterium sp. AL-21]
          Length = 598

 Score = 65.9 bits (159), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 75/331 (22%), Positives = 139/331 (41%), Gaps = 44/331 (13%)

Query: 187 LDCIVDLREYDVPYHIRFAIDNDV----------RCGQWYDVSISSTGPL----LEKRVD 232
           L  + D+ E+D+P++ R+ ID ++          +C     +S S    +    LE +  
Sbjct: 105 LGSVKDILEHDIPFYRRYLIDKNIFPMGQVLVNGKCVDSASISFSCDTDVCIFELEGKPK 164

Query: 233 LLQRA--EVHVCAFDIETTKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDL 290
            ++    ++   +FDIE    P   P A+ D I+M+S +   QG     ++ +     DL
Sbjct: 165 QVESGFPDLKTLSFDIEVRN-PKGMPQAEEDPIIMMS-LSSNQGL----KKVLSTKSSDL 218

Query: 291 EYTPKPEFEGYFKVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHG 350
           E+           V  +  E  +++ +F  ++   P I + YN D FD P++  RAA   
Sbjct: 219 EF-----------VETLKTEAHIIQRFFEIVRSENPDILLGYNSDNFDMPYIRDRAAKLN 267

Query: 351 FKMS-----EELGFQCDKNQGECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGY 405
            K +       + F           K   H+D +  ++R  YL      L+ V K     
Sbjct: 268 VKPNLGVDGSGIKFMRRGYANSALVKGRIHVDLYLLMRR--YLQLDRYTLERVYKELFDE 325

Query: 406 DPLEVNPEDMVRF---AKEKPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDE 462
              +V  +++ ++     EK + +  YS+ DAVA   +    + P    L  I+     +
Sbjct: 326 AKEDVPGDEIYQYWDEGGEKLKKLFEYSLDDAVAVTKIAEKML-PLSMELTRIVGQPFFD 384

Query: 463 VLRKGSGTLCEMLLMVQAYKANVICPNKHQS 493
           + R  +G + E  L+ +A++   + PNK  S
Sbjct: 385 IARMATGQMVEWYLIRKAHEIGDMVPNKPSS 415


>gi|209695583|ref|YP_002263512.1| DNA polymerase II [Aliivibrio salmonicida LFI1238]
 gi|208009535|emb|CAQ79827.1| DNA polymerase II [Aliivibrio salmonicida LFI1238]
          Length = 789

 Score = 65.5 bits (158), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 56/203 (27%), Positives = 85/203 (41%), Gaps = 37/203 (18%)

Query: 777 AHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIG-KPLELDTDGIW 835
           A K I+NSFYG +   G R++   +A  +T  G +I++  R LIE  G + +  DTD  +
Sbjct: 496 AIKIIMNSFYGVLGSSGCRFFDHRLASSITMRGHEIMKTTRELIESQGYEVIYGDTDSTF 555

Query: 836 CVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSE 895
             L  S P +   K                              + LVD +++ +  H E
Sbjct: 556 VTLGESMPSDEADKIG----------------------------KQLVDHINQWWTAHLE 587

Query: 896 ------CSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAEL--KGFEIKRRGE 947
                  ++E E +  Y+  ++P  +   +  KKRYA     G   E+  KG E  R   
Sbjct: 588 SEYAIDSALEIEYETHYRIFLMPTIRGSEMGSKKRYAGLIRKGDKEEIIFKGLETVRTDW 647

Query: 948 LKLIKVFQAELFDKFLHGSTIEE 970
             L + FQ  LFDK  H   +EE
Sbjct: 648 TPLSQEFQKVLFDKVFHQQAVEE 670



 Score = 42.7 bits (99), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 70/283 (24%), Positives = 116/283 (40%), Gaps = 39/283 (13%)

Query: 296 PEFEGYFKVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHH--GFKM 353
           PE      +  V NE  LL    +  Q   P I + +N   FD+  L  RA  H   F++
Sbjct: 189 PEETSDLPIEWVENEKALLLALESWFQTFDPDIIIGWNVINFDFNLLIKRAKWHNLAFRL 248

Query: 354 ---SEELGF-QCDKNQGECRAKFACH--LDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDP 407
              +  L F + +KN+ +    F     LD    +K  +Y    S  L++V++  L    
Sbjct: 249 GRGNSSLYFRESNKNRQQGFLSFPGRVVLDGIDALKTATY-HFSSWSLESVSQELLNEGK 307

Query: 408 LEVNPEDMV----RFAKEKPQMMASYSVSDAVATYYLY-MTYVHPFIFSLATIIPMSPDE 462
              +P D +    R  +E    +A Y++ D V    ++ +T++  F+     +  +  D 
Sbjct: 308 SIHDPSDRMGEINRMYREDKCALAKYNLQDCVLVTRIFELTHLLEFVIERTKLTGIELDR 367

Query: 463 VLRKGSGTLCEMLLMVQAYKANVICPNKHQSDPEKFYRNHLLESETYI---GGHVECLES 519
           V   GS      L + + ++A  I PN              LESE +I   GG+V   + 
Sbjct: 368 V--GGSVAAFTNLYLPRLHRAGYIAPN--------------LESENWIASPGGYVMSSKP 411

Query: 520 GVFRSDLPTSFKLDPSAYEQLLNNLDRD---LQYAIKVEGKMD 559
           G++ S L   FK   S Y  ++     D   L   +K+E  +D
Sbjct: 412 GLYESVLVLDFK---SLYPSIIKTFRIDPLGLVEGLKLESGID 451


>gi|408380929|ref|ZP_11178479.1| DNA polymerase B region [Methanobacterium formicicum DSM 3637]
 gi|407816194|gb|EKF86756.1| DNA polymerase B region [Methanobacterium formicicum DSM 3637]
          Length = 591

 Score = 65.1 bits (157), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 74/328 (22%), Positives = 141/328 (42%), Gaps = 44/328 (13%)

Query: 187 LDCIVDLREYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLL-----EKRVDLLQR----- 236
           L  + D+RE+D+P++ R+ ID  +      +V + +  P +     +K   +++      
Sbjct: 100 LSQVEDIREHDIPFYRRYLIDKGLFPMGEVEVEVETASPEMNCVSSDKGASIVELKGQIR 159

Query: 237 ------AEVHVCAFDIETTKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDL 290
                  E+ + + DIE    P   P+A+ D I+MIS +   QG     R  +      L
Sbjct: 160 PVNSDFPELKILSLDIEVYN-PKGMPNAEDDPIIMIS-LSSNQGL----RMVISTAESPL 213

Query: 291 EYTPKPEFEGYFKVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHG 350
           ++              V +E  +++ +   +++  P I + YN D FD+P+++ RAA   
Sbjct: 214 DFA-----------ETVEDEAAMIQKFVEIVEDENPDILIGYNSDNFDFPYIKDRAAILD 262

Query: 351 FKMSEELGFQCDK--NQGECRA---KFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGY 405
             ++      C K   +G   A   K   HLD +  ++R  YL      L+ V     G 
Sbjct: 263 IPLNLGTDGSCLKFMKRGFTNAALVKGRIHLDLYLIMRR--YLQLDRYTLERVYLELFGQ 320

Query: 406 DPLEVNPEDMVRF---AKEKPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDE 462
           +  ++  +++ ++     E+ + +  YS+ DAVA   +    + P    L  I+     +
Sbjct: 321 EKYDIPGDEIHQYWSDGGERLEKLFRYSLDDAVAVTEIAEKMI-PLTLELTRIVGQPFFD 379

Query: 463 VLRKGSGTLCEMLLMVQAYKANVICPNK 490
           V R  +G   E  L+ +A +   + PNK
Sbjct: 380 VARMTTGQQVEWYLIRKANEQGEVVPNK 407



 Score = 42.0 bits (97), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 26/67 (38%), Positives = 32/67 (47%), Gaps = 1/67 (1%)

Query: 775 QLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIG-KPLELDTDG 833
           Q A K + NS YG       RWY +E A  +T  G   I+      EK G KP+  DTDG
Sbjct: 521 QEALKRLANSMYGVYGYSRFRWYRLECADAITAWGRDYIKKTMEKSEKFGFKPVYADTDG 580

Query: 834 IWCVLPG 840
            + V  G
Sbjct: 581 FYAVYEG 587


>gi|149907877|ref|ZP_01896545.1| DNA polymerase II [Moritella sp. PE36]
 gi|149808883|gb|EDM68814.1| DNA polymerase II [Moritella sp. PE36]
          Length = 823

 Score = 65.1 bits (157), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 58/198 (29%), Positives = 89/198 (44%), Gaps = 16/198 (8%)

Query: 777 AHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIG-KPLELDTDGIW 835
           A K ++NSFYG +   G R+Y   +A  +T  G +I+Q     IE  G K +  DTD  +
Sbjct: 519 AIKILMNSFYGVLGSGGCRFYDTRLASSITMRGQEIMQTTAGWIEAKGYKVIYGDTDSTF 578

Query: 836 CVLPG-SFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHS 894
            +L    F + ++  + D  + L        L+  +     N Q+Q L   + + Y+   
Sbjct: 579 VLLDADKFADGYSGSSAD--RGLQADRMGAELSAYI-----NQQWQQL---LREDYDIDC 628

Query: 895 ECSIEFEVDGPYKAMILPASKEEGILIKKRYA--VFNDDGTLAELKGFEIKRRGELKLIK 952
              IE+EV   Y   ++P  +      KKRYA  V   DG     KG E  R     L K
Sbjct: 629 FLDIEYEVH--YHKFLMPTIRGLDKGSKKRYAGLVHTKDGEKLIFKGLETVRTDWTDLAK 686

Query: 953 VFQAELFDKFLHGSTIEE 970
           +FQ EL+ +  H   +E+
Sbjct: 687 MFQMELYHRVFHNIAVED 704


>gi|156936857|ref|YP_001434653.1| DNA polymerase II [Ignicoccus hospitalis KIN4/I]
 gi|156565841|gb|ABU81246.1| replicative DNA polymerase I [Ignicoccus hospitalis KIN4/I]
          Length = 786

 Score = 64.3 bits (155), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 91/432 (21%), Positives = 173/432 (40%), Gaps = 91/432 (21%)

Query: 83  KFRPYFYAATKEKMEMD---VEAYLRRRYESQIADIEILEKEDLDLKNHLSGLHKSYLKI 139
           +FRPYFY   KE  +++    +  L  + +S I  +E+L+K+       L G  K+ +K+
Sbjct: 37  RFRPYFYVLLKENADLERLKRKLSLLSKPKSPIISLEVLKKK-------LIGREKTVIKV 89

Query: 140 SFDTVQQLMDVKKDLLHVVERNQAKFDAAEAYESILTGKREQRPQDFLDCIVDLREYDVP 199
           +    + + + ++++                       KR       L+ + D+ E D+ 
Sbjct: 90  TTVIPESVREYREEV-----------------------KR-------LEEVADVLEADIR 119

Query: 200 YHIRFAIDNDVRCGQWYDVSISSTGPLLEKRVDLLQ-------------RAEVHVCAFDI 246
           + +R+ ID  +R   W +  +   GP    RV+ +              + ++   AFDI
Sbjct: 120 FSMRYIIDTGLRPCGWAEFEVKELGPEKSYRVETVYEVLNGPEALNIDVKPKLKTLAFDI 179

Query: 247 ET-TKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVT 305
           E   K     P+ D     +IS  L  +G ++                         K++
Sbjct: 180 EVYNKSGTPRPERD----PIISIALASEGSVV------------------------SKLS 211

Query: 306 NVNNEIELLRLWF-AHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKM--SEELG-FQC 361
              N+ +L+ +WF   M E  P + V YN + FDWP+L  R+   G ++    ++G    
Sbjct: 212 QDKNDKDLI-VWFKKEMLERDPDVVVGYNSNSFDWPYLIERSKVVGVRLDVGRKVGVIPT 270

Query: 362 DKNQGECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKE 421
               G        ++D + + K    +   +    A     +  D   + P  ++    E
Sbjct: 271 TGAYGHVSVPGRLNVDVYDFAKEVYEVKVKTLENVADYFNVMKKDERPLIPHHLIYQYWE 330

Query: 422 KPQ---MMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMV 478
            PQ   ++  Y+ +DA++T  L   ++ PF   L+ +  +  D+V+    G   E  LM 
Sbjct: 331 DPQKRDVLRKYNEADALSTLMLAELFI-PFGEQLSYLTGLPLDQVMAASVGYRVEWYLMR 389

Query: 479 QAYKANVICPNK 490
            A+  N + PN+
Sbjct: 390 VAFVTNELVPNR 401



 Score = 40.8 bits (94), Expect = 7.5,   Method: Compositional matrix adjust.
 Identities = 47/213 (22%), Positives = 84/213 (39%), Gaps = 51/213 (23%)

Query: 770 LYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIG-KPLE 828
           L D+ Q A K + N+ YGY+    ARWY  E A  VT  G ++I  A  +  ++G K + 
Sbjct: 507 LLDNRQKAVKVLANAHYGYMGWPHARWYCRECAEAVTSWGRELILKAIQMARELGLKVIY 566

Query: 829 LDTDGIWCVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSK 888
            DTD ++ +                                       ++ + L++ + K
Sbjct: 567 GDTDSLFVIY------------------------------------DKEKVEKLIERIEK 590

Query: 889 TYETHSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGEL 948
                 E   E ++D  YK +    +       KKRYA   +DG + ++ GFE  R    
Sbjct: 591 ------ELGFEIKIDKIYKKLFFTEA-------KKRYAGILEDGRI-DVVGFEAVRGDWA 636

Query: 949 KLIKVFQAELFDKFLHGSTIEECYSAVAAVANR 981
           ++ K  Q ++ +  L    + +    V ++  +
Sbjct: 637 EVAKEVQEKIIEIVLKEGDVNKAVEYVNSIIEK 669


>gi|20094475|ref|NP_614322.1| B family DNA polymerase [Methanopyrus kandleri AV19]
 gi|19887571|gb|AAM02252.1| B family DNA polymerase [Methanopyrus kandleri AV19]
          Length = 830

 Score = 64.3 bits (155), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 74/300 (24%), Positives = 123/300 (41%), Gaps = 61/300 (20%)

Query: 770  LYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLI-EKIG-KPL 827
            + D  Q A+K + NS+YGY+    ARW+  E A  VT  G   I   R +  EK G K +
Sbjct: 539  ILDVRQQAYKVLANSYYGYMGWANARWFCRECAESVTAWGRYYISEVRRIAEEKYGLKVV 598

Query: 828  ELDTDGIWCVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVS 887
              DTD ++  LP +  E    + K+  K                                
Sbjct: 599  YGDTDSLFVKLPDADLEETIERVKEFLK-------------------------------- 626

Query: 888  KTYETHSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGE 947
               E +    +E E++  YK ++         + KK+YA + +DG +   KG E+ RR  
Sbjct: 627  ---EVNGRLPVELELEDAYKRILF--------VTKKKYAGYTEDGKIV-TKGLEVVRRDW 674

Query: 948  LKLIKVFQAELFDKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESST 1007
              + +  Q  +  + L  +  E     +  V  R       +  D+     ID ++ +S 
Sbjct: 675  APIARETQRRVLKRILADNDPEAALKEIHEVLERL------KSGDVD----IDELAVTSQ 724

Query: 1008 MSKSLADYGEQKSCAVTTARRLSDFLGDTMVKDKGLRCQYIVACEPQGTPVSERAVPVAI 1067
            ++K  ++Y  QK   V  A RL+  LG  +  + G   +Y++   P    VS++A PV +
Sbjct: 725  LTKKPSEY-VQKGPHVRAALRLARHLG--VEPEPGTIVRYVIVRGPGS--VSDKAYPVEL 779



 Score = 58.2 bits (139), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 95/409 (23%), Positives = 162/409 (39%), Gaps = 63/409 (15%)

Query: 171 YESILTGKREQRPQDFLDCIVDLREYDVPYHIRFAIDNDVRCGQWYDVSISSTGPL---- 226
           Y  ++   REQ  +  LD + ++ E D+P+  R A+D ++      DVS   TG      
Sbjct: 85  YPKVVPKLREQVKK--LDGVKEVYEADIPFVRRAAVDLNLPPASEVDVSDLDTGSWSGLP 142

Query: 227 -----LEKRVDLLQRA----EVHVCAFDIETTKLPLKFPDADYDIIMMISYML---DGQ- 273
                +E   +L  R     ++ V +FD+E    P          I+ IS+     DG+ 
Sbjct: 143 AYFADVEDARELDHRPYPIEDLVVASFDLEVLAEPGTTIKGASGPIIAISFAYSTPDGER 202

Query: 274 -GYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNVNNEI-------ELLRLWFAHMQEVK 325
             Y+I  +   GED               F+V  V  E+         LR +F   + V 
Sbjct: 203 RNYVITWK---GEDES-------------FEVDGVETEVIVCRSEAAALRRFFDEFRRVD 246

Query: 326 PGIYVTYNGDYFDWPFLETRAAHHGFKMSE------ELGFQCDKNQGECRAKF--ACHLD 377
           P +  TYNGD FD P+L+ RA   G  +S       + G       G   +      H+D
Sbjct: 247 PDVVFTYNGDEFDLPYLQHRAGKLGIDVSPLARPAGKRGIILKHGGGRYASDIFGRAHVD 306

Query: 378 CFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVR-FAKEKPQMMASYSVSDAVA 436
            +   +++  L + +  L+   K  LG +  E+   D+   + +     +  YS  DA  
Sbjct: 307 LYHTARKNLKLERFT--LEEAVKDVLGVEKEEMELADINEAWKRGNLDELMRYSAEDAHY 364

Query: 437 TYYLYMTYVHPFI-FSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVICPNKHQSDP 495
           T  L +      +  S  T +P+ PD   R   G L E   + +A + +++ PNK   D 
Sbjct: 365 TLELGLELAQVELELSYLTRLPL-PD-ATRFSFGQLAEWRAIYKARQEDILVPNKPTRDE 422

Query: 496 EKFYRNH------LLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYE 538
            K  R        + E E  +  +V C++      ++  +  + P  ++
Sbjct: 423 YKRRRRKAYKGAIVFEPEIGLHENVVCVDFASLYPNVMVAHNISPDTFD 471


>gi|325273021|ref|ZP_08139333.1| DNA polymerase II [Pseudomonas sp. TJI-51]
 gi|324101850|gb|EGB99384.1| DNA polymerase II [Pseudomonas sp. TJI-51]
          Length = 786

 Score = 64.3 bits (155), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 84/344 (24%), Positives = 132/344 (38%), Gaps = 80/344 (23%)

Query: 727  TVRSFRDRRYEYKG------LNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHKC 780
            +V  FR  R+          + +VW+G+   AK  GNS               L  A K 
Sbjct: 451  SVEGFRGGRFSRSQHCLPAIVERVWQGR-EAAKREGNS--------------PLSQALKI 495

Query: 781  ILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIG-KPLELDTDGIWCVLP 839
            I+N+FYG +   G R++   +A  +T  G +I+   R LIE  G   +  DTD  +  L 
Sbjct: 496  IMNAFYGVLGSSGCRFFDPRLASSITLRGHQIMHQTRALIEARGFDVIYGDTDSTFVWLK 555

Query: 840  GSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETH------ 893
            G+  E                        D  R       + LV  V++ ++TH      
Sbjct: 556  GAHAEE-----------------------DAVRIG-----RELVAEVNQWWQTHLRESMD 587

Query: 894  SECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFND--DGTLAEL-KGFEIKRRGELKL 950
             +C++E + +  Y+  ++P  +      KKRYA      DGT   + KG E  R     L
Sbjct: 588  LDCALELQFEVHYRRFLMPTIRGTDEGSKKRYAGLRQRADGTEEMVFKGLESVRTDWSPL 647

Query: 951  IKVFQAELFDKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIA--DSELIDYISESSTM 1008
             + FQ EL+ +   G    +              L D   + +A  + EL+ Y      +
Sbjct: 648  ARQFQQELYARVFRGEPYRDY-------------LCDYVQRTLAGENDELLVY---RKRL 691

Query: 1009 SKSLADYGEQKSCAVTTARRLSDF---LGDTMVKDKGLRCQYIV 1049
             + LADY       V  AR   D+   LG  +   +G    Y++
Sbjct: 692  RRPLADYQRNVPPHVRAARLADDYNKRLGRPLQYQRGGWISYVI 735


>gi|288561239|ref|YP_003424725.1| DNA polymerase family B PolB1 [Methanobrevibacter ruminantium M1]
 gi|288543949|gb|ADC47833.1| DNA polymerase family B PolB1 [Methanobrevibacter ruminantium M1]
          Length = 638

 Score = 64.3 bits (155), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 93/416 (22%), Positives = 169/416 (40%), Gaps = 49/416 (11%)

Query: 187 LDCIVDLREYDVPYHIRFAIDNDVRC-------GQWYDV--SISSTGPLLE-------KR 230
           L+ +  LRE+D+P++ R+ IDN +         G+  D   ++ S    LE        +
Sbjct: 111 LNSVKQLREHDIPFYRRYLIDNALVPMAELELEGELIDSFETVDSDDESLEILKLSCPPK 170

Query: 231 VDLLQRAEVHVCAFDIETTKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDL 290
                  E  + +FD+E    P   P+ D D I+MI           I+       +   
Sbjct: 171 TANTDFQEFRMMSFDLEVRN-PHGMPNPDQDEIIMIG----------IDSNVGVRKVIST 219

Query: 291 EYTPKPEFEGYFKVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHG 350
           +     + E    +  V  E E++  +   +++    I + YN D FD+P+L  RA    
Sbjct: 220 KGDEFDDDEEMDFIEIVETEKEMIERFVQTVKDANIDIIIGYNSDNFDFPYLRDRAKRWE 279

Query: 351 FKMS---EELGFQCDKNQGECRAKF--ACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGY 405
             +    +  G +  +      A F    H+D +  ++R  Y+      L+ V     G 
Sbjct: 280 VDLDLGVDGSGLKFLRRGYANSAAFRGLLHVDLYLVMRR--YMSLDRYTLERVYLEFFGE 337

Query: 406 DPLEVNPEDMVRF---AKEKPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDE 462
           + ++V  E +  F     ++ + +  YS+ D VAT  + M  + P    L  I+     +
Sbjct: 338 EKIDVPGERIYEFWDNGGDELKNLFKYSLDDVVATLKIAMETL-PLNLELTRIVRQPFFD 396

Query: 463 VLRKGSGTLCEMLLMVQAYKANVICPNKHQSDPEKFYRNHLLESETYIGGHVECLESGVF 522
           V R  +G   E  L+ +AY+ + + PNK          N++ E  +  GG+V+  E G+ 
Sbjct: 397 VTRMSTGQQAEWFLVRKAYEVDEVVPNKPN-----MTMNNIRERGSNSGGYVKEPEIGLH 451

Query: 523 RSDLPTSFKLDPSAYEQLL--NNLDRDLQYAIKVEGKMDLESV-SNYDEVKNAIME 575
            + +   FK   S Y  L+   N+  D+     +      E   + YDE+ + + E
Sbjct: 452 ENLVQFDFK---SLYPTLIISKNISPDVLVTDNISYNAKFEDFETGYDEIDSVLEE 504


>gi|171185814|ref|YP_001794733.1| DNA polymerase I [Pyrobaculum neutrophilum V24Sta]
 gi|170935026|gb|ACB40287.1| DNA polymerase B region [Pyrobaculum neutrophilum V24Sta]
          Length = 854

 Score = 63.9 bits (154), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 103/443 (23%), Positives = 180/443 (40%), Gaps = 72/443 (16%)

Query: 133 HKSYLKISFDTVQQLMDVKKDLLHVVERN----QAKFDAAEAYESILTGKREQRP----- 183
           HK YL I+  T ++L++   ++L     +    + K+DA    + ++T    + P     
Sbjct: 74  HKPYL-IAMKTPEELVEKHPEVLRHPGFSHLGIEEKYDALHDRKVVVTKVYAKDPLSVGG 132

Query: 184 --QDFLDCIVDLREYDVPYHIRFAIDNDVRCGQWYDVSISSTGPL--------------- 226
                 D I +  E  + YH  +  D ++  G WY  + +   PL               
Sbjct: 133 GKNSLRDIIGETWESRIKYHHSYLFDRNIIPGMWYRANGNGLTPLEIAIPEEVKSSLGNI 192

Query: 227 --------LEKRVDLLQRAEVHV--CAFDIET-TKLPLKFPD---ADYDIIMMISYMLDG 272
                    E+ + L Q    H+   A D+E  T    + PD   A+Y++I +     DG
Sbjct: 193 FKSEHAKVAEEWIPLFQAPVPHIRRVAIDVEIYTPQENRIPDPKEAEYEVISVALVGSDG 252

Query: 273 QGYLIINRECVGEDIE-DLEYTPKPEFEGYFKVTNVNNEIELLRLWFAHMQEVKPGIYVT 331
              +++ R     D+E +L Y  +P++E  F     ++E +LLR  F  +  V+  I VT
Sbjct: 253 LRRVLMLRR---PDVEAELRY--RPDYEIMF----FDSEYDLLREVFKTI--VQYPIVVT 301

Query: 332 YNGDYFDWPFLETRAAHHGFKMSEELGFQCDKNQGECRAKFACHLDCFAWVKRDSY---- 387
           +NGD FD P+L  RA   G    EE+     ++          H+D F +    +     
Sbjct: 302 FNGDNFDLPYLYNRAVALGIP-KEEVPIAVKRDY--VSVAPGVHIDMFKFFAIKAVEAYA 358

Query: 388 ---LPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQMMASYSVSDAVATYYLYM-- 442
              + +G +GL  +  A LG   +E   +++ R    +   +A Y+  DA+ T Y  +  
Sbjct: 359 FGGVYRGERGLDGIAYAILGVGKVE-RQKNVSRMGYWE---LAEYNYRDALITLYFTLYN 414

Query: 443 -TYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVICPNKHQSDPEK--FY 499
              V   I  L+ I  M  +++ R         +L  +  +   + PNK     EK   +
Sbjct: 415 GEMVMKLIMLLSRIAKMPIEDITRSQVSAWIRNMLYYEHRRRGWLIPNKEDILREKGSVH 474

Query: 500 RNHLLESETYIGGHVECLESGVF 522
              +++ + Y G  V     GVF
Sbjct: 475 TKAIIKGKKYAGAVVLDPPLGVF 497


>gi|113970804|ref|YP_734597.1| DNA polymerase II [Shewanella sp. MR-4]
 gi|113885488|gb|ABI39540.1| DNA damage-inducible DNA polymerase II [Shewanella sp. MR-4]
          Length = 810

 Score = 63.9 bits (154), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 77/296 (26%), Positives = 127/296 (42%), Gaps = 47/296 (15%)

Query: 774  LQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIG-KPLELDTD 832
            L  A K I+NS YG +  +G  ++  ++A  +T  G +I++  R  IE++G + +  DTD
Sbjct: 516  LSQAIKIIMNSLYGVLGSQGCVFHDAKLASSITMRGHQIMKQTRAWIEEMGYQVIYGDTD 575

Query: 833  GIWCVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYET 892
              +  L    PE        L K++                  N Q+Q+    ++K ++ 
Sbjct: 576  STFVYLG---PEPDLSDINALGKQIA--------------AQINQQWQS---KIAKDFQL 615

Query: 893  HSECSIEFEVDGPYKAMILPA--SKEEGILIKKRY--AVFNDDGTL-AELKGFEIKRRGE 947
             S   ++FE    Y+   +P     EEG   KKRY  A  N DG L    KG E  R   
Sbjct: 616  ESFLELQFERH--YEQFFMPTLRGSEEG--SKKRYVGAWRNKDGALEITFKGMEQVRSDW 671

Query: 948  LKLIKVFQAELFDKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESST 1007
              L +  QAEL+++  +   I    +          D++        D+EL+     S  
Sbjct: 672  SPLARKVQAELYERMFNQRDISGYLT----------DVIGELQAGKRDNELVF----SKR 717

Query: 1008 MSKSLADYGEQKSCAVTTARRLSDFLGDTMVKDKGLRCQYIVACE-PQGTPVSERA 1062
            M ++L +Y  + S  V  AR+L +  G      +G +  Y++    P+  PVS R+
Sbjct: 718  MRRNLDEYTAKSSPHVKVARQLCELTGKASYGKRGAQIDYVITVNGPE--PVSYRS 771


>gi|307595059|ref|YP_003901376.1| DNA polymerase Pol2 [Vulcanisaeta distributa DSM 14429]
 gi|307550260|gb|ADN50325.1| DNA polymerase Pol2 [Vulcanisaeta distributa DSM 14429]
          Length = 784

 Score = 63.9 bits (154), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 80/419 (19%), Positives = 169/419 (40%), Gaps = 56/419 (13%)

Query: 141 FDTVQQLMDVKKDLLHVVERNQ--AKFDAAEAYESILTGKREQRPQDF-LDCIVDLREYD 197
           F+ V++ ++ K   + V++R     + DA     +I    RE R     +  + D+ E D
Sbjct: 56  FNNVKRKLEGKVLNVEVIKRKMFGNEVDAIRVTATIPEKVRELRELAAEVPGVEDVLEAD 115

Query: 198 VPYHIRFAIDNDVRCGQW------------YDVSISSTGPLLEKRVDLLQRAEVHVCAFD 245
           + +  R+ +D  V+   W            Y V +        + ++  +     V AFD
Sbjct: 116 IRFSQRYLLDMGVKPSNWIVVDQCEEVKGNYQVDLVCLAKSRPRMIEEHKLPSFRVLAFD 175

Query: 246 IETTKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVT 305
           IE    P   P+ D D +++IS M    G  +                        F V 
Sbjct: 176 IEVYN-PRGMPNPDRDPVIIISTMTKEDGVKM------------------------FVVD 210

Query: 306 NVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMS-EELGFQCDKN 364
           +  N+ +++R +  + ++  P I V YN + FDWP+L  R++  G +++   +G   + +
Sbjct: 211 DNKNDAKIIREFLDYFRKYDPDIVVGYNNNGFDWPYLVNRSSRVGVRLALSRMGNPPEPS 270

Query: 365 -QGECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFA---- 419
             G        ++D + +++  S +      +K++ +A   +  ++ +   ++       
Sbjct: 271 VYGHWSIIGRANVDLYNFIEEISEIK-----VKSLDRAAEFFGIMKRSERVLIPGHRIHE 325

Query: 420 ----KEKPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEML 475
               K K  ++  Y+  D V+TY L    + PF   L++I  +  D+V     G   E +
Sbjct: 326 YWDDKNKRDLLLKYARDDVVSTYGL-AEKLLPFAIQLSSISGLPLDQVGAASVGARVEWM 384

Query: 476 LMVQAYKANVICPNKHQSDPEKFYRNHLLESETYIGGHVECLESGVFRSDLPTSFKLDP 534
           +  +A K   + PN+ +   E +    +LE    +  ++  ++       +   + + P
Sbjct: 385 IFYEAVKRGELAPNREERPYETYKGAVVLEPRPGLHENIAVIDFSSMYPSIMMKYNVSP 443



 Score = 45.4 bits (106), Expect = 0.34,   Method: Compositional matrix adjust.
 Identities = 71/294 (24%), Positives = 116/294 (39%), Gaps = 77/294 (26%)

Query: 769  VLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEK---IGK 825
            VL +  Q A K + N+ YGY    GARWY  E+A  VT  G  ++   R +IEK   +G 
Sbjct: 501  VLLNERQRALKVMANAMYGYCGWLGARWYRREVAEAVTAWGRNLL---RTVIEKARSLGL 557

Query: 826  PLEL-DTDGIWCVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVD 884
            P+   DTD ++                                      N +D+   L++
Sbjct: 558  PIIYGDTDSLFV------------------------------------RNISDKVDALIN 581

Query: 885  PVSKTYETHSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKR 944
             V      ++E   E +VD  Y+ ++   +       KKRY     +G + ++ GFE  R
Sbjct: 582  YV------NNELGFEVKVDKVYRRVLFTEA-------KKRYVGLTVEGEV-DIVGFEAVR 627

Query: 945  RGELKLIKVFQAELFDKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISE 1004
                ++ K  Q  + +  L    + +  S V +V    +D +     DI D      +  
Sbjct: 628  GDWAEIAKDVQENVAEIVLTTGDVGKAISYVKSV----IDKVKAYQFDIDD------VII 677

Query: 1005 SSTMSKSLADYGEQKSCAVTTARRL---------SDFLGDTMVKDKGLRCQYIV 1049
              T+ KSL +Y +  +  V  A++L          D +G  +VK  G +  Y V
Sbjct: 678  WKTLDKSLNEY-KVLTPHVAAAKQLVEAGYKVGKGDMIGYVVVKGGGAKLAYKV 730


>gi|383320057|ref|YP_005380898.1| replicative DNA polymerase I [Methanocella conradii HZ254]
 gi|379321427|gb|AFD00380.1| replicative DNA polymerase I [Methanocella conradii HZ254]
          Length = 799

 Score = 63.9 bits (154), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 86/355 (24%), Positives = 138/355 (38%), Gaps = 66/355 (18%)

Query: 192 DLREYDVPYHIRFAIDNDV-------RCGQWYDVSISSTGPLLEKRVDLLQRAE--VHVC 242
           D+RE D+ + +R+ ID  +         G+   V  +  G L        +  E  + V 
Sbjct: 111 DVREADILFGVRYIIDRRLIPMGGIEAEGEPVSVDYAGLGMLCHNPKAFAREDEPPLKVM 170

Query: 243 AFDIETTKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYF 302
           AFD E    P   PDA  D I++IS        +  NRE                 E   
Sbjct: 171 AFDCEMWN-PRGMPDAAEDPIIIIS--------IKTNRE-----------------EKVL 204

Query: 303 KVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMS-----EEL 357
             T+ +++  L++ +  ++++  P + V YN D FDWP++  RA  H  K+S        
Sbjct: 205 TATDEDDK-GLIKEFIRYIRDYDPDVIVGYNQDSFDWPYINERAKKHKIKLSVCRDGSTP 263

Query: 358 GFQCDKNQGECRAKFACHLDCFAWVKRD------SYLPQGSQGLKAVTKAKLGYDPLEVN 411
            F     Q + +     ++D F   +RD        L   +  L  + K K  Y P    
Sbjct: 264 MFGRGGLQKKVKLVGRLNIDLFQAAQRDMDGVKVKTLENVADYLGVMNKEKRTYIP---- 319

Query: 412 PEDMVRF--AKEKPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSG 469
             ++ R+    ++  ++  YS  D  +TY +    + P  F  A +     D V R G G
Sbjct: 320 GGEIYRYWADSKRRDILIRYSKDDVESTYGIAGELL-PLQFEFARMAHEPADNVSRMGRG 378

Query: 470 TLCEMLLMVQAYKANVICPNKHQSDPEKFYRNHLLESETYIGGHVECLESGVFRS 524
              E  L   AY+   + P+K              E ETY+GG V     G+ R+
Sbjct: 379 RQVEAYLAYVAYEYGELIPSKGG------------EVETYVGGFVFPPVKGIHRN 421


>gi|206890537|ref|YP_002249153.1| DNA polymerase [Thermodesulfovibrio yellowstonii DSM 11347]
 gi|206742475|gb|ACI21532.1| DNA polymerase [Thermodesulfovibrio yellowstonii DSM 11347]
          Length = 779

 Score = 63.9 bits (154), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 107/469 (22%), Positives = 190/469 (40%), Gaps = 80/469 (17%)

Query: 84  FRPYFYAAT--KEKMEMDVEAYLRRRYESQIADIEILEKEDLDLKNHLSGLHKSYLKISF 141
           +RPYF+     K+K   ++E  +++   + +   EI E   +     L G  K ++KI +
Sbjct: 29  YRPYFFVLPIDKKKAIKEIEEIVKK---NSLPVTEITEDRRI-----LHGEEKEFIKI-Y 79

Query: 142 DTVQQLMDVKKDLLHVVERNQAKFDAAEAYESILTGKREQRPQDFLDCIVDLREYDVPYH 201
               Q M   +D + V+E  +    +                      I+D  EY +  +
Sbjct: 80  AKRHQDMQKIRDAIKVLEEKRGGSGS----------------------IIDEFEYQISAY 117

Query: 202 IRFAIDNDVRCGQWYDVSISSTGPLLEKRVDLLQRAEVHVCAFDIETTKLPLKFPDADYD 261
             +  +  + C  W+++          K+V++    ++ + AFD+E  ++    P     
Sbjct: 118 RTYLAEKGLSCLNWFEIETKGNQIKSIKKVEI-PPPKLKILAFDMEVLEVQRGTPS---- 172

Query: 262 IIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNVNNEIELLRLWFAHM 321
            I+MIS   +G   +I  +E         +YT             VN+E EL++ +   +
Sbjct: 173 -IVMISVFGEGLSKVITYQEA--------KYTVDSNV--------VNDEKELIKSFLEIV 215

Query: 322 QEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDKNQG---ECRAKFA----- 373
           Q+  P I   YN D +D P L  RA     ++  ++      N G     RA+F      
Sbjct: 216 QDYDPDIIAGYNTDLYDMPILRERAK----QLKVDISILSRDNSGITLSKRARFTTARLI 271

Query: 374 --CHLDCFAWVKRD-SYLPQGSQ-GLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQM--MA 427
              H+D F +V    S + Q  Q  LK V+   LG   L++  ED+++   +  ++  +A
Sbjct: 272 GRVHIDIFNFVFNILSPMLQSEQLTLKNVSHELLGDTKLDMEYEDILQAWDKGHELDKLA 331

Query: 428 SYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVIC 487
            Y + D+   Y L    + P I  L  I   S  +  R     L E   + ++ + N + 
Sbjct: 332 RYCLKDSELVYEL-TKMLLPDIEELTKITGQSLFDTSRMPYSQLVEWYYIKKSKQQNRVI 390

Query: 488 PNKHQSDPEKFYRNHLLESETYIGGHVECLESGVFRSDLPTSF-KLDPS 535
           PN+ + D  K       +  TY GG V+  E G+ +  +   F  L PS
Sbjct: 391 PNQPKFDEIK-----ERQKATYEGGFVKEPEVGLHKGIVVVDFASLYPS 434


>gi|114048029|ref|YP_738579.1| DNA polymerase II [Shewanella sp. MR-7]
 gi|113889471|gb|ABI43522.1| DNA damage-inducible DNA polymerase II [Shewanella sp. MR-7]
          Length = 810

 Score = 63.9 bits (154), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 77/296 (26%), Positives = 127/296 (42%), Gaps = 47/296 (15%)

Query: 774  LQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIG-KPLELDTD 832
            L  A K I+NS YG +  +G  ++  ++A  +T  G +I++  R  IE++G + +  DTD
Sbjct: 516  LSQAIKIIMNSLYGVLGSQGCVFHDAKLASSITMRGHQIMKQTRAWIEEMGYQVIYGDTD 575

Query: 833  GIWCVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYET 892
              +  L    PE        L K++                  N Q+Q+    ++K ++ 
Sbjct: 576  STFVYLG---PEPELSDINALGKQIA--------------AQINQQWQS---KIAKDFQL 615

Query: 893  HSECSIEFEVDGPYKAMILPA--SKEEGILIKKRY--AVFNDDGTL-AELKGFEIKRRGE 947
             S   ++FE    Y+   +P     EEG   KKRY  A  N +G L    KG E  R   
Sbjct: 616  ESFLELQFERH--YEQFFMPTLRGSEEG--SKKRYVGAWRNRNGALEITFKGMEQVRSDW 671

Query: 948  LKLIKVFQAELFDKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESST 1007
              L +  QAEL+++  +   I    +          D++        D+EL+     S  
Sbjct: 672  SPLARKVQAELYERMFNQRDISGYLT----------DVIGELQAGKRDNELVF----SKR 717

Query: 1008 MSKSLADYGEQKSCAVTTARRLSDFLGDTMVKDKGLRCQYIVACE-PQGTPVSERA 1062
            M ++L +Y  + S  V  AR+L D  G      +G +  Y++    P+  PVS R+
Sbjct: 718  MRRNLDEYTAKSSPHVKVARQLCDLTGKASYGKRGAQIDYVITVNGPE--PVSYRS 771


>gi|323495671|ref|ZP_08100742.1| DNA polymerase II [Vibrio sinaloensis DSM 21326]
 gi|323319306|gb|EGA72246.1| DNA polymerase II [Vibrio sinaloensis DSM 21326]
          Length = 787

 Score = 63.5 bits (153), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 50/198 (25%), Positives = 87/198 (43%), Gaps = 37/198 (18%)

Query: 777 AHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIG-KPLELDTDGIW 835
           A K I+NSFYG +   G R++   +A  +T  G +I++  +LLIE  G + +  DTD  +
Sbjct: 494 AIKIIMNSFYGVLGSSGCRFFDTRLASSITMRGHEIMKQTKLLIENKGYQVIYGDTDSTF 553

Query: 836 CVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSE 895
             L GS+                            ++   ++  Q+LV  ++  + TH +
Sbjct: 554 VSLNGSY----------------------------SQAQADEIGQSLVQYINHWWTTHLK 585

Query: 896 ------CSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAEL--KGFEIKRRGE 947
                   +E E +  Y+  ++P  + +    KKRYA    +G    +  KG E  R   
Sbjct: 586 EEYNLTSILELEYETHYRRFLMPTIRGQETGSKKRYAGLIGEGEQERIVFKGLESARTDW 645

Query: 948 LKLIKVFQAELFDKFLHG 965
             L + FQ++L++   HG
Sbjct: 646 TPLAQRFQSQLYEMVFHG 663


>gi|383812805|ref|ZP_09968232.1| DNA polymerase II [Serratia sp. M24T3]
 gi|383298215|gb|EIC86522.1| DNA polymerase II [Serratia sp. M24T3]
          Length = 789

 Score = 63.5 bits (153), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 54/199 (27%), Positives = 86/199 (43%), Gaps = 35/199 (17%)

Query: 774 LQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDG 833
           L  A K I+N+ YG +     R++   +A  +T  G +I+Q  R LIE+ G         
Sbjct: 493 LSQALKIIMNALYGVLGTSSCRFFDSRLASSITLRGHEIMQQTRKLIEEEG--------- 543

Query: 834 IWCVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETH 893
            + V+ G     F                 V LN   +  + N+  Q LV  V++ ++TH
Sbjct: 544 -YQVIYGDTDSTF-----------------VWLNSAHSNEDANEIGQRLVVKVNQWWKTH 585

Query: 894 ------SECSIEFEVDGPYKAMILPASKEEGILIKKRYA--VFNDDGTLAELKGFEIKRR 945
                  E ++E E +  Y+  ++P  +   +  KKRYA  V + DG     KG E  R 
Sbjct: 586 LNQELGLESALELEFETHYQRFLMPTIRGSELGSKKRYAGLVKDADGEHMVYKGLETVRT 645

Query: 946 GELKLIKVFQAELFDKFLH 964
              KL + FQ  L+++  H
Sbjct: 646 DWTKLAQTFQQSLYERIFH 664


>gi|332796355|ref|YP_004457855.1| DNA polymerase B exonuclease [Acidianus hospitalis W1]
 gi|332694090|gb|AEE93557.1| DNA polymerase B exonuclease [Acidianus hospitalis W1]
          Length = 780

 Score = 63.5 bits (153), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 84/361 (23%), Positives = 147/361 (40%), Gaps = 69/361 (19%)

Query: 195 EYDVPYHIRFAIDNDVRCGQWYDVSISST--GPLLEKRVDLLQR---------AEVHVCA 243
           E D+ +++R++IDND++   W+   +       L  K+V  L++          E+ + A
Sbjct: 117 EADIRFYMRYSIDNDLKPFNWFKAEVEEIQDSKLRVKKVYELKKIIQIYEDKPPELRIMA 176

Query: 244 FDIETTKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFK 303
           FDIE        P+   D +++I    +  G     ++ V +D                 
Sbjct: 177 FDIEVYN-KYGSPNPRRDPVIIIGVWTNNGG-----KQFVMKD----------------- 213

Query: 304 VTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDK 363
                +++E++R +   + +  P I + YN + FDWP+L  R    G K+        + 
Sbjct: 214 -----DDLEIIREFAKFVLDYDPDIILGYNSNGFDWPYLLERVNSRGIKLDIGRKVNSEP 268

Query: 364 NQG-----ECRAKFACHLDCFAW----VKRDSYLPQGSQGLKAVTKA-KLGYDPLEVNPE 413
           +QG         +    L  FA     VK  S L   +  L  V K  ++  +  ++ PE
Sbjct: 269 SQGTYGHYSVVGRLNVDLLGFASSIAEVKVKS-LDNIADYLGVVKKTERVNLEWYQI-PE 326

Query: 414 DMVRFAKEKPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCE 473
                +K    ++  Y++ D  +TY L   ++ PF   L  I  +  D++     G   E
Sbjct: 327 YWSDPSKR--DILLKYNMDDVRSTYLLKDVFL-PFGEQLTMITGLPLDQLSMASVGYRVE 383

Query: 474 MLLMVQAYKANVICPNKHQSDPEKFYRNHLLESETYIGGHV----ECLESGVFRSDLPTS 529
            LLM +AYK N I PN+ +            E E+Y GG V      +  GV+  D  + 
Sbjct: 384 WLLMREAYKFNEIIPNRVER-----------EYESYKGGLVISPAPGIHEGVYVLDFSSM 432

Query: 530 F 530
           +
Sbjct: 433 Y 433



 Score = 50.1 bits (118), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 30/71 (42%), Positives = 41/71 (57%), Gaps = 1/71 (1%)

Query: 772 DSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIG-KPLELD 830
           D  Q A K + N+FYGY+   GARWYS E A  VT  G +II +   L+E+ G K +  D
Sbjct: 504 DERQRALKVMANAFYGYMGWLGARWYSKEGAEAVTAWGREIISSVAKLVEERGFKVIYGD 563

Query: 831 TDGIWCVLPGS 841
           TD ++    G+
Sbjct: 564 TDSVFIKGSGN 574


>gi|308048877|ref|YP_003912443.1| DNA damage-inducible DNA polymerase II [Ferrimonas balearica DSM
            9799]
 gi|307631067|gb|ADN75369.1| DNA damage-inducible DNA polymerase II [Ferrimonas balearica DSM
            9799]
          Length = 771

 Score = 63.2 bits (152), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 78/313 (24%), Positives = 125/313 (39%), Gaps = 50/313 (15%)

Query: 762  QEAQDMVVLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIE 821
            Q  Q  +     L  A K ++NSFYG +   G R++   +A  +T  G  I++  R  IE
Sbjct: 469  QREQAKLARNGPLSQAIKILMNSFYGVLGAAGCRFHDPRLASSITLRGHDIMKTTRRWIE 528

Query: 822  KIG-KPLELDTDGIWCVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQ 880
              G + +  DTD  +  + G  P+  T +         I    V L         N ++Q
Sbjct: 529  AEGYQVIYGDTDSTFVHI-GDEPDTDTAQ--------RIGRELVTL--------VNQRWQ 571

Query: 881  TLVDPVSKTYETHSECSIEFEVDGPYKAMILPASKEEGILIKKRY--AVFNDDGTLAELK 938
                   K  E   + ++E E +  Y    +P  +      KKRY   V   +G +   K
Sbjct: 572  ------QKLAEQGLDSALELEFETHYHHFFMPTIRGSSEGSKKRYVGGVEGPEGLVLTFK 625

Query: 939  GFEIKRRGELKLIKVFQAELFDKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSEL 998
            G E  R     L + FQ EL+ ++  G         V  +  RW+       +   DSEL
Sbjct: 626  GMETVRSDWTPLARAFQQELYQQWFSGKP-------VTGLVRRWIRETRAGER---DSEL 675

Query: 999  IDYISESSTMSKSLADYGEQKSCAVTTARRLSDFLGDTMVKDKGLRCQYIVACEPQGTPV 1058
            +     S  + + L  Y  Q +     A RL++ L + +V  KG R +Y++    Q  P 
Sbjct: 676  V----YSKRLRRDLEGY--QANAPHVQAARLANQLQNDVVYRKGSRIRYLIG---QSGP- 725

Query: 1059 SERAVPVAIFETD 1071
                 P+ + ET+
Sbjct: 726  ----YPLGLGETN 734


>gi|84490287|ref|YP_448519.1| DNA polymerase [Methanosphaera stadtmanae DSM 3091]
 gi|84373606|gb|ABC57876.1| putative DNA polymerase [Methanosphaera stadtmanae DSM 3091]
          Length = 594

 Score = 63.2 bits (152), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 82/377 (21%), Positives = 156/377 (41%), Gaps = 56/377 (14%)

Query: 187 LDCIVDLREYDVPYHIRFAIDNDVRC-------GQWYDVSISSTG-----PLLEKRVDLL 234
           L  + ++REYD+P++ R+ ID  +         G+  D+            L E  +D  
Sbjct: 103 LPTVREIREYDIPFYRRYLIDKQITPTNVIEIHGKTQDMDFDVDDDVIIFKLEENPIDTK 162

Query: 235 QRAEVH-VCAFDIETTKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYT 293
           +    + + +FDIE        P A  D I+M+S   +     +++ +   +D       
Sbjct: 163 EIVNQNKILSFDIEVYNAE-GMPSAKKDAIIMMSLCGNNGFKKVLSTKKSSKDF------ 215

Query: 294 PKPEFEGYFKVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKM 353
                     V  +  E ++L+ +   ++E  P + V YN D FD P+++ RA     K+
Sbjct: 216 ----------VETLPTEEDMLKRFVEIIKEENPDMLVGYNSDNFDLPYIKERADTLNIKL 265

Query: 354 SEEL----------GFQCDKNQGECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKL 403
              +          GF    N G  R +   H+D +  V++  Y+      L+ V K   
Sbjct: 266 PLGIDKSSIKFIKRGFN---NAGLIRGR--VHVDLYLLVRQ--YMNLDRYTLERVYKELF 318

Query: 404 GYDPLEVNPEDMVRFAKEKPQMMAS---YSVSDAVATYYLYMTYVHPFIFSLATIIPMSP 460
             + ++V  + +  +     +++     YS+ DA+ T  +    + P   +   ++    
Sbjct: 319 DIEKIDVPGDKIFEYWDSDNELLEKLFDYSMDDAITTTEI-ADKLTPLTVAQTRLVGQPL 377

Query: 461 DEVLRKGSGTLCEMLLMVQAYKANVICPNKHQSDPEKFYRNHLLESETYIGGHVECLESG 520
            ++ R  +G + E  L+ +A++ N I PNK  ++     R+    S+   GG+V+  E G
Sbjct: 378 FDIARMTTGQMVEWYLIWKAFEKNNIIPNKPTTNEYTQRRS----SKKVAGGYVKEPEKG 433

Query: 521 VFRSDLPTSFK-LDPSA 536
           +F       FK L PS 
Sbjct: 434 LFEHIAYLDFKSLYPSV 450



 Score = 42.7 bits (99), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 26/73 (35%), Positives = 35/73 (47%), Gaps = 1/73 (1%)

Query: 771 YDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIG-KPLEL 829
           YD  Q   K + NS +G       RWY  E A  +T  G + IQ+A    E+ G KP+  
Sbjct: 520 YDFEQQGLKRLANSMFGAYGYARFRWYKKECAAAITAWGREYIQDAMKKSEEYGFKPIYA 579

Query: 830 DTDGIWCVLPGSF 842
           DTDG +    G+ 
Sbjct: 580 DTDGFYATYIGNL 592


>gi|405968223|gb|EKC33310.1| DNA polymerase epsilon catalytic subunit A [Crassostrea gigas]
          Length = 90

 Score = 63.2 bits (152), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 28/87 (32%), Positives = 45/87 (51%), Gaps = 2/87 (2%)

Query: 1883 MALLAQDWHCAMPQCGQPYDREVMENALLQIVRQRERLYHLQDLVCIRCNQVKAAHLAEQ 1942
            +   +  W C   QC  PYD + +E+ LL  + ++   + LQDL C++CN +K  ++ + 
Sbjct: 5    LCYFSSSWACV--QCKAPYDMDEIEDTLLDAIHRKSMAFILQDLKCVKCNGIKENNMRKY 62

Query: 1943 CACAGSFRCKEDASDFRSKMQIFLNIA 1969
            C CAG F     A+D    +  F  IA
Sbjct: 63   CRCAGDFTNTVPAADLYKTLMTFRGIA 89


>gi|148262379|ref|YP_001229085.1| DNA polymerase B region [Geobacter uraniireducens Rf4]
 gi|146395879|gb|ABQ24512.1| DNA polymerase B region [Geobacter uraniireducens Rf4]
          Length = 743

 Score = 63.2 bits (152), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 64/252 (25%), Positives = 108/252 (42%), Gaps = 62/252 (24%)

Query: 771  YDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNA-RLLIEKIGKPLEL 829
            Y +LQ A K ++NSFYGY+      +  + +A  VT  G + I+     L+E+  +P+E+
Sbjct: 464  YQALQQAFKVLINSFYGYLGSPLHNFSDVALAAEVTRLGRETIKTMLAWLLERGAQPVEV 523

Query: 830  DTDGIWCVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKT 889
            DTDGI+ + P                                   T ++ + LV  +S++
Sbjct: 524  DTDGIYFIPPSVVA-------------------------------TAEKEELLVRELSQS 552

Query: 890  YETHSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELK 949
                    IE E+DG Y+AM     K         YA+   DG +  +KG  ++ RG  K
Sbjct: 553  L----PGGIEVELDGRYRAMFSYKIKN--------YALLGYDGKMT-VKGSGLRSRGIEK 599

Query: 950  LIKVFQAELFDKFL--HGSTIEECYSAVAAVANRWLDLLDNQGKDIADSEL-IDYISESS 1006
             ++ F  E+    L   G+ +E  Y               +  + + D E  I ++++S 
Sbjct: 600  YLRAFMEEIIRLLLAGEGAKVEAVYR--------------DYTQKLRDHEFGISWLAKSE 645

Query: 1007 TMSKSLADYGEQ 1018
            T+ +SLA Y E+
Sbjct: 646  TLGESLAVYREK 657


>gi|154150651|ref|YP_001404269.1| DNA polymerase B region [Methanoregula boonei 6A8]
 gi|153999203|gb|ABS55626.1| DNA polymerase B region [Methanoregula boonei 6A8]
          Length = 821

 Score = 62.8 bits (151), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 78/271 (28%), Positives = 114/271 (42%), Gaps = 46/271 (16%)

Query: 769  VLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIG-KPL 827
            VLYD  Q   K I+N++YG       R +  E+   VT  G  II++ R +IE+ G K +
Sbjct: 508  VLYDMQQNVLKVIMNTYYGVSGYTRFRLFDREIGAAVTSVGRAIIEHTRHVIEQEGYKVI 567

Query: 828  ELDTDGIWCVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVS 887
              DTD     +P    E      + L+KKL  SY       D ARN  N           
Sbjct: 568  YGDTDSCMVQIPPLDREKTIETARTLEKKLNTSYQ------DFARNVLNA---------- 611

Query: 888  KTYETHSECSIEFEVDGPYKAMILPASKEEGILIKKRYA--VFNDDGTLA---ELKGFEI 942
               +TH   SI+FE      A    A K      KKRYA  +   +G  A   ++ GFEI
Sbjct: 612  ---DTHY-FSIKFE---KIYARFFQAGK------KKRYAGRLVWKEGKEADQIDIVGFEI 658

Query: 943  KRRGELKLIKVFQAELFDKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYI 1002
            +R    ++ K+ Q+++ +  L G+   E  + +  +  ++       GK   D   I   
Sbjct: 659  RRSDTPQITKIVQSKVMESILAGADFAEIKTYLGEIITKY-----RAGKFSLDEAGI--- 710

Query: 1003 SESSTMSKSLADYGEQKSCAVTTARRLSDFL 1033
                 + KSL DY E     V  AR  + +L
Sbjct: 711  --PGGIGKSLDDY-ETDDAQVRGARYANQYL 738



 Score = 44.7 bits (104), Expect = 0.56,   Method: Compositional matrix adjust.
 Identities = 65/257 (25%), Positives = 102/257 (39%), Gaps = 37/257 (14%)

Query: 195 EYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLLEKRVDLLQRAEVHVCAFDIETTKLPLK 254
           E D+P+  RF ID    CG    V+  ST    +  +     A   VC  DIE       
Sbjct: 118 EADIPFATRFMID----CGLTGAVTSPSTTVEYQALIPAESDAPARVCMIDIECED-ERG 172

Query: 255 FPDADYDIIMMI----SYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFK-----VT 305
           FPDA  D I+ I    S+  D   +L+ +    GE I + E     +  G FK     + 
Sbjct: 173 FPDAQRDAIICITCYDSFDNDYTTFLLGSAILPGE-IAEKEAAGGLK-NGCFKKGVHTIC 230

Query: 306 NVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFK--MSEELGFQCDK 363
             +NE  +LR + A++    P +   +N   FD P++  R    G    +   L    ++
Sbjct: 231 TYDNEASMLREFGAYIARRDPDVLSGWNFVDFDMPYITGRMEKLGLSPVLLARLPGMTER 290

Query: 364 NQGECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFA---- 419
           N    RA F    D     K+     + S  L AV + ++G        E  VR+     
Sbjct: 291 NAVRGRALF----DLLTGYKKMHSTLKESYRLDAVAEEEVG--------ERKVRYTGTIS 338

Query: 420 ---KEKPQMMASYSVSD 433
              +++P ++  Y+  D
Sbjct: 339 DLWRKQPALLVEYNFKD 355


>gi|386875637|ref|ZP_10117796.1| DNA-directed DNA polymerase [Candidatus Nitrosopumilus salaria
           BD31]
 gi|386806393|gb|EIJ65853.1| DNA-directed DNA polymerase [Candidatus Nitrosopumilus salaria
           BD31]
          Length = 852

 Score = 62.8 bits (151), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 73/266 (27%), Positives = 117/266 (43%), Gaps = 32/266 (12%)

Query: 297 EFEGYFKVT--NVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMS 354
           E E   KVT  + + E E+++  F  ++E  P + VTYNGD FD P+L  RA   G K S
Sbjct: 255 ELEQNIKVTFYDADKEKEMIQDAFELIKEF-PFV-VTYNGDEFDLPYLYNRAERLGIKNS 312

Query: 355 EELGFQCDKNQGECRAKFACHLDCFAWVKRDSY-LPQGSQ-----GLKAVTKAKLGYDPL 408
           E   +     +     K   HLD +  +   S+ +   SQ      L +V+KA LG + +
Sbjct: 313 ENPFYMM---RDSATLKEGVHLDLYRTLSNRSFQIYAFSQKYTDFSLNSVSKALLGKEKV 369

Query: 409 EVNPEDMVRFAKEKPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIP----MSPDEVL 464
           +   E    F +      A+Y  +DA+ TY L  ++    +  L  II     M  D++ 
Sbjct: 370 DYGLE----FDELSLYQTANYCYNDALLTYEL-TSFNKDLLMDLLVIIARIGRMPIDDIA 424

Query: 465 RKGSGTLCEMLLMVQAYKANVICPNKH--QSDPEKFYRNHLLESETYIGGHVECLESGV- 521
           R G       LL  +  + N + P +   QS  E    + +++ + Y GG V   + G+ 
Sbjct: 425 RMGVSQWIRSLLYYEHRRRNCLIPKREELQSRSEGVMSDAVIKDKKYRGGLVVEPKEGIH 484

Query: 522 -------FRSDLPTSFKLDPSAYEQL 540
                  F S  P+  K+   +YE +
Sbjct: 485 FDVVVMDFASLYPSIIKVRNLSYETV 510


>gi|124802365|ref|XP_001347450.1| DNA polymerase delta catalytic subunit [Plasmodium falciparum 3D7]
 gi|232011|sp|P30315.1|DPOD1_PLAFK RecName: Full=DNA polymerase delta catalytic subunit
 gi|23495030|gb|AAN35363.1|AE014831_39 DNA polymerase delta catalytic subunit [Plasmodium falciparum 3D7]
 gi|9941|emb|CAA44289.1| DNA Polymerase delta [Plasmodium falciparum]
 gi|160270|gb|AAA29589.1| DNA polymerase-delta [Plasmodium falciparum]
          Length = 1094

 Score = 62.8 bits (151), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 131/574 (22%), Positives = 222/574 (38%), Gaps = 104/574 (18%)

Query: 66  IDLYFVSQDG-STFKSKYKFRPYFYAATKEKMEMDVEAYLRRRYESQIADIEILEKEDLD 124
           I +Y + +DG S   + + F PYFY    +  + D E  ++         +E+L  E+L+
Sbjct: 119 IRIYSLRKDGCSVLINVHNFFPYFYVEKPD--DFDNEDLIK---------LEMLMNENLN 167

Query: 125 LKNHLSGLHKSYLKISFDTVQQLM----DVKKDLLHVVERNQAKFDAAEAYESILTGKRE 180
           L +      K  LKI     + LM    + KKD L +               ++L  K  
Sbjct: 168 LNSQYKIYEKKILKIEIVKTESLMYFKKNGKKDFLKI---------------TVLLPKMV 212

Query: 181 QRPQDFLDCIVDLR---------EYDVPYHIRFAIDNDVRCGQWY--------------- 216
              + + + IV +          E ++P+ +R+ ID+ +    W                
Sbjct: 213 PSLKKYFEGIVHVNNKSIGGIVYEANLPFILRYIIDHKITGSSWINCKKGHYYIRNKNKK 272

Query: 217 --------DVSISSTGPL-LEKRVDLLQRAEVHVCAFDIETTKLPLK-FPDADYDIIMMI 266
                   D+S     P+ LE      Q  ++ + +FDIE  KL  K FP+A  D I+ I
Sbjct: 273 ISNCTFEIDISYEHVEPITLENEYQ--QIPKLRILSFDIECIKLDGKGFPEAKNDPIIQI 330

Query: 267 SYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNVNNEIELLRLWFAHMQEVKP 326
           S +L  QG  I N  C       LE    P       V   N+E  LL  W   +  + P
Sbjct: 331 SSILYFQGEPIDN--CTKFIFTLLECASIPGSN----VIWFNDEKTLLEAWNEFIIRIDP 384

Query: 327 GIYVTYNGDYFDWPFLETRAAHHGFKMSEELG-----FQCDKNQGECRAKFACH----LD 377
                YN   FD P++  R      K  + LG         K+      +F  H    ++
Sbjct: 385 DFLTGYNIINFDLPYILNRGTALNLKKLKFLGRIKNVASTVKDSSFSSKQFGTHETKEIN 444

Query: 378 CFAWVKRDSY-LPQGSQGLKAVTKAKLGYDPLEVNPED-----MVRFAKEKPQM---MAS 428
            F  ++ D Y L +    LK+ T   + ++ L+   ED     M     E P+    +A+
Sbjct: 445 IFGRIQFDVYDLIKRDYKLKSYTLNYVSFEFLKEQKEDVHYSIMNDLQNESPESRKRIAT 504

Query: 429 YSVSDAVATYYLY--MTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVI 486
           Y + D V    L   + +++ ++  +A +       +L +G        L  +  + N +
Sbjct: 505 YCIKDGVLPLRLIDKLLFIYNYV-EMARVTGTPFVYLLTRGQQIKVTSQLYRKCKELNYV 563

Query: 487 CPNKHQ--SDPEKFYRNHLLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQLL--N 542
            P+ +   +  EK+    +LE     G ++E + +  F S  P+        Y  L+  N
Sbjct: 564 IPSTYMKVNTNEKYEGATVLEPIK--GYYIEPISTLDFASLYPSIMIAHNLCYSTLIKSN 621

Query: 543 NLDRDLQY--AIKVEGKMDLESVSNYDEVKNAIM 574
           +   DLQ      ++GK +L+ V     VK  I+
Sbjct: 622 HEVSDLQNDDITTIQGKNNLKFVK--KNVKKGIL 653


>gi|7416107|dbj|BAA93703.1| DNA polymerase B3 [Sulfurisphaera ohwakuensis]
          Length = 781

 Score = 62.8 bits (151), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 76/327 (23%), Positives = 135/327 (41%), Gaps = 57/327 (17%)

Query: 195 EYDVPYHIRFAIDNDVRCGQWYDVSISST--GPLLEKRVDLLQR---------AEVHVCA 243
           E D+ +++R++ID +++   W +  +          K+V  L++          E+ V A
Sbjct: 117 EADIRFYMRYSIDINLKPFYWIEAEVEEIKENNFRVKKVYELKKINKLYEDKIPELKVLA 176

Query: 244 FDIETTKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFK 303
           FDIE        P+   D +++I       G     ++ + +  +DL             
Sbjct: 177 FDIEVYN-KYGSPNPRRDPVIIIGVWTKEGG-----KQFLADKYDDLR------------ 218

Query: 304 VTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDK 363
                     +R +   +Q   P I V YN + FDWP+L  RA   G ++  ++G + + 
Sbjct: 219 ---------AIREFINFVQTYDPDIIVGYNINNFDWPYLLERANIRGIRL--DVGRRVN- 266

Query: 364 NQGECRAKFACHLDCFAWVKRDSY-LPQGSQGLKAVTKAKLGYDPLEVNPE--------- 413
             GE       H      +  D Y   Q  Q +K  T   +  D L V P+         
Sbjct: 267 --GEPSQGVYGHYSITGRLNVDLYGFAQSIQEVKVKTLENIA-DYLGVLPKEKRTIVEWY 323

Query: 414 DMVRF--AKEKPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTL 471
           D+ ++   ++K  ++  Y++ DA + Y L   ++ PF   L  I  +  D++     G  
Sbjct: 324 DIPKYWDDEKKRDILLKYNLDDAKSAYLLGEVFI-PFGIELTRISGLPLDQLSMASVGHR 382

Query: 472 CEMLLMVQAYKANVICPNKHQSDPEKF 498
            E LLM +AYK N + PNK + + E +
Sbjct: 383 VEWLLMREAYKYNELIPNKEEREYESY 409



 Score = 53.5 bits (127), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 56/208 (26%), Positives = 83/208 (39%), Gaps = 52/208 (25%)

Query: 772 DSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQN-ARLLIEKIGKPLELD 830
           D+ Q A K + N+FYGY+   GARWYS E A  VT  G +II + A++  EK    +  D
Sbjct: 504 DARQRALKVMANAFYGYMGWLGARWYSKEGAEAVTAWGRQIISDSAKIAKEKGFTVIYGD 563

Query: 831 TDGIWCVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTY 890
           TD I+    G           D+   +T                                
Sbjct: 564 TDSIFVKGGG-----------DINSLIT-------------------------------- 580

Query: 891 ETHSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKL 950
           E  S+  +E ++D  YK +    +       KKRYA   +DG + ++ GFE  R     L
Sbjct: 581 EISSKFGLEIKIDKIYKRVFFTEN-------KKRYAGLTEDGKI-DIVGFEAVRGDWCDL 632

Query: 951 IKVFQAELFDKFLHGSTIEECYSAVAAV 978
            K  Q  + +  L    +E+    V +V
Sbjct: 633 AKQVQTNVIELILKSGKVEDAIKYVKSV 660


>gi|410721508|ref|ZP_11360842.1| DNA polymerase elongation subunit (family B) [Methanobacterium sp.
           Maddingley MBC34]
 gi|410598768|gb|EKQ53334.1| DNA polymerase elongation subunit (family B) [Methanobacterium sp.
           Maddingley MBC34]
          Length = 590

 Score = 62.8 bits (151), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 74/331 (22%), Positives = 140/331 (42%), Gaps = 44/331 (13%)

Query: 187 LDCIVDLREYDVPYHIRFAIDNDVRCGQWYDVSI--------------SSTGPLLEKRVD 232
           L  + D+RE+D+P++ R+ ID  +      +V +              S++   LE  + 
Sbjct: 100 LSQVKDIREHDIPFYRRYLIDKGLFPMAEVEVEVKTESSEMKGIPSDKSTSVVELEGNIR 159

Query: 233 LLQR--AEVHVCAFDIETTKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDL 290
            +     ++ + + DIE    P   P+A+ D I+MIS +   QG     R  +      L
Sbjct: 160 PINSDFPDLKILSLDIEVYN-PKGMPNAEDDPIIMIS-LSSNQGL----RMVLSTAESPL 213

Query: 291 EYTPKPEFEGYFKVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHG 350
           ++           V  + +E E+LR +   +++  P I + YN D FD+P+++ RAA   
Sbjct: 214 DF-----------VETLKDEAEMLRRFVEIVEDENPDILIGYNSDNFDFPYIKDRAALLD 262

Query: 351 FKMS-----EELGFQCDKNQGECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGY 405
             ++       L F           K   H+D +  ++R  YL      L+ V     G 
Sbjct: 263 VPLNLGTDGSSLKFMKRGFANAALVKGRIHIDLYLIMRR--YLQLDRYTLERVYLELFGE 320

Query: 406 DPLEVNPEDMVRFAKE---KPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDE 462
           +  ++  +++  +  +   K + +  YS+ DAVA   +    + P    L  I+     +
Sbjct: 321 EKYDIPGDEIHEYWDDCGPKLEKLCHYSLDDAVAVTEIAEKMI-PLTLELTRIVGQPFFD 379

Query: 463 VLRKGSGTLCEMLLMVQAYKANVICPNKHQS 493
           + R  +G   E  L+ +A++   + PNK  S
Sbjct: 380 LARMTTGQQVEWYLIRKAHEQGELVPNKPSS 410



 Score = 42.7 bits (99), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 26/67 (38%), Positives = 32/67 (47%), Gaps = 1/67 (1%)

Query: 775 QLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIG-KPLELDTDG 833
           Q A K + NS YG       RWY +E A  +T  G   I+      EK G KP+  DTDG
Sbjct: 521 QEALKRLANSMYGVYGYSRFRWYRLECAAAITAWGRDYIKKTMEKAEKFGFKPVYADTDG 580

Query: 834 IWCVLPG 840
            + V  G
Sbjct: 581 FYAVYQG 587


>gi|104782409|ref|YP_608907.1| DNA polymerase II [Pseudomonas entomophila L48]
 gi|95111396|emb|CAK16116.1| DNA polymerase II and 3'-> 5' exonuclease [Pseudomonas entomophila
            L48]
          Length = 788

 Score = 62.8 bits (151), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 84/355 (23%), Positives = 138/355 (38%), Gaps = 71/355 (20%)

Query: 727  TVRSFRDRRYEYKG------LNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHKC 780
            +V  FR  R+  +       + +VW+G+   AK  GN+               L  A K 
Sbjct: 451  SVEGFRGARFSRRQHCLPAIVERVWQGR-EAAKRDGNA--------------PLSQALKI 495

Query: 781  ILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIG-KPLELDTDGIWCVLP 839
            I+N+FYG +   G R++   +A  +T  G +I++  RLLIE  G   +  DTD  +  L 
Sbjct: 496  IMNAFYGVLGSSGCRFFDPRLASSITMRGHQIMRQTRLLIEARGFDVIYGDTDSTFVWLK 555

Query: 840  GSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIE 899
            G+  E+   +                    + R    +  Q     + +T    S   ++
Sbjct: 556  GAHDEDAAAR--------------------IGRELVAEVNQWWRLHLGETMGLASALELQ 595

Query: 900  FEVDGPYKAMILPASK--EEGILIKKRYA--VFNDDGTLAEL-KGFEIKRRGELKLIKVF 954
            +E    Y+  ++P  +  EEG   KKRYA  V   DG+   + KG E  R     L + F
Sbjct: 596  YETH--YRRFLMPTIRGAEEG--SKKRYAGLVRRVDGSEEMVYKGLESVRTDWSPLARQF 651

Query: 955  QAELFDKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLAD 1014
            Q EL+ +   G                + D L    +     EL + +     + + LAD
Sbjct: 652  QQELYGRIFRGQP--------------YRDYLREYVERTMAGELDELLIYRKRLRRPLAD 697

Query: 1015 YGEQKSCAVTTARRLSDF---LGDTMVKDKGLRCQYIVACE-PQGTPVSERAVPV 1065
            Y       V  AR   ++   LG  +   +G    Y++    P+  P+  R  P+
Sbjct: 698  YQRNVPPHVRAARLADEYNRRLGRPLQYQRGGWISYVITTAGPE--PLENRQAPI 750


>gi|312077124|ref|XP_003141165.1| hypothetical protein LOAG_05580 [Loa loa]
          Length = 138

 Score = 62.4 bits (150), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 37/126 (29%), Positives = 54/126 (42%), Gaps = 7/126 (5%)

Query: 1860 SFILPNVICSYCNDCRDLDLCRDMALLAQDWHCAMPQCGQPYDREVMENALLQIVRQRER 1919
            S  L  + CS C    DLD+C+  A     W C  P CG+ +    +E  L++ V Q   
Sbjct: 19   SCTLTQLFCSVCCQSNDLDVCQSEA-----WIC--PSCGKQFHSSTIEQLLIERVNQLLI 71

Query: 1920 LYHLQDLVCIRCNQVKAAHLAEQCACAGSFRCKEDASDFRSKMQIFLNIANRQGFQLLQE 1979
             Y +QD  C RC  V+  +L+  C C G        ++ R  ++    IA +     L E
Sbjct: 72   AYTIQDFKCTRCEAVRRHNLSLFCDCCGVEENVISPAELRFNLETVGKIAQQHNLTRLAE 131

Query: 1980 CTSWIL 1985
               W L
Sbjct: 132  LCGWTL 137


>gi|82704721|ref|XP_726671.1| hypothetical protein [Plasmodium yoelii yoelii 17XNL]
 gi|23482178|gb|EAA18236.1| Unknown protein [Plasmodium yoelii yoelii]
          Length = 604

 Score = 62.4 bits (150), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 34/127 (26%), Positives = 56/127 (44%), Gaps = 8/127 (6%)

Query: 1857 PCPSFILPNVICSYCNDCRDLDLCRDMALLAQD------WHCAMPQCGQPYDREVMENAL 1910
            PC    L ++ C  C+    +++   +     +      W C    C   YD E +E  +
Sbjct: 468  PCHELTLKDIFCENCSSVNHMNIVTSLVEAEINGKRSFIWLC--KNCNSKYDNEFIETKI 525

Query: 1911 LQIVRQRERLYHLQDLVCIRCNQVKAAHLAEQCACAGSFRCKEDASDFRSKMQIFLNIAN 1970
            L  ++     Y+ QDLVC  CN +K+ H    C C  SF  + + S++   ++I  N+AN
Sbjct: 526  LSHLQDTFDAYNAQDLVCNNCNAIKSFHRRAICKCGKSFVPRLEISNWVQTLEIMENLAN 585

Query: 1971 RQGFQLL 1977
                 LL
Sbjct: 586  MLNMPLL 592


>gi|290559769|gb|EFD93093.1| DNA polymerase Pol2 [Candidatus Parvarchaeum acidophilus ARMAN-5]
          Length = 772

 Score = 62.4 bits (150), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 87/353 (24%), Positives = 151/353 (42%), Gaps = 48/353 (13%)

Query: 195 EYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLLEK-RVDLLQRAEVHVCAFDIET-TKLP 252
           E D+P++ R+ +D D+  G    + I   G  ++K     +    +   A DIET TK  
Sbjct: 103 EADIPFYKRYLLDKDI--GSHSILEIERNGDYIKKISSKGVGEFPIRAAALDIETYTKRA 160

Query: 253 LKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNVNNEIE 312
             FP+A  D I+ +S +   +   I   +  GE+I                     +E +
Sbjct: 161 --FPNAKVDPILAVSIVSSKESKCITWLDAEGENI-----------------IKAKDEKD 201

Query: 313 LLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHG--FKMSEELGFQCDKNQGECRA 370
           LL     ++   K  + + YN D FD P++  R+   G  F+++   GF+  K +GE R 
Sbjct: 202 LLLKLSEYLSSNKFNVIIGYNSDSFDMPYIHERSRILGVDFRLN---GFEL-KIKGEKR- 256

Query: 371 KFA-----CHLDCFAWVKRDSY----LPQGSQGLKAVTKAKLGYDPLEVNPEDMVRF--A 419
           K A      H+D   ++ R  Y    L   +  L+AV    +G    E + + +      
Sbjct: 257 KVAEINGIAHIDILNFI-RHIYSIYNLKTETLTLRAVASELIGDKKGEFDWDKITEVFNN 315

Query: 420 KEKPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQ 479
           +E    + SY V D+  T  ++   V P +  L  ++  +  ++ R  +G + E L+M +
Sbjct: 316 RELASTLCSYCVQDSKITLDIFYA-VLPLLAELNKLVGQTLSDISRMTTGAVVENLVMKK 374

Query: 480 AYKANVICPNKHQSDPEKFYRNHLLESETYI----GGHVECLESGVFRSDLPT 528
           A   N + PNK  SD +   R H + +  ++     G  E +    FRS  P+
Sbjct: 375 ALAINELIPNK-PSDFQINDRMHKVNTGAFVFQPTPGLYENIAVVDFRSLYPS 426


>gi|117921070|ref|YP_870262.1| DNA polymerase II [Shewanella sp. ANA-3]
 gi|117613402|gb|ABK48856.1| DNA damage-inducible DNA polymerase II [Shewanella sp. ANA-3]
          Length = 810

 Score = 62.4 bits (150), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 77/296 (26%), Positives = 129/296 (43%), Gaps = 47/296 (15%)

Query: 774  LQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIG-KPLELDTD 832
            L  A K I+NS YG +  +G  ++  ++A  +T  G +I++  R  IE++G + +  DTD
Sbjct: 516  LSQAIKIIMNSLYGVLGSQGCVFHDAKLASSITMRGHQIMKQTRAWIEEMGYQVIYGDTD 575

Query: 833  GIWCVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYET 892
              +  L    PE        L K++             AR   N Q+Q+    +++ ++ 
Sbjct: 576  STFVYLG---PEPDLSDINALGKQIA------------AR--MNQQWQS---KIAQEFQL 615

Query: 893  HSECSIEFEVDGPYKAMILPA--SKEEGILIKKRY--AVFNDDGTL-AELKGFEIKRRGE 947
             S   ++FE    Y+   +P     EEG   KKRY  A  N+ G L    KG E  R   
Sbjct: 616  ESFLELQFERH--YEQFFMPTLRGSEEG--SKKRYVGAWRNNSGALEITFKGMEQVRSDW 671

Query: 948  LKLIKVFQAELFDKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESST 1007
              L +  QAEL+++  +   I    +          D++        D EL+     S  
Sbjct: 672  SPLARKVQAELYERMFNQRDISGYLA----------DVIGELQAGKRDDELV----FSKR 717

Query: 1008 MSKSLADYGEQKSCAVTTARRLSDFLGDTMVKDKGLRCQYIVACE-PQGTPVSERA 1062
            M ++L +Y  + S  V  AR+L +  G +    +G +  Y++    P+  PVS R+
Sbjct: 718  MRRNLDEYTAKSSPHVKVARQLCELTGKSSFGKRGAQIDYVITVNGPE--PVSHRS 771


>gi|192359630|ref|YP_001983342.1| DNA polymerase II [Cellvibrio japonicus Ueda107]
 gi|190685795|gb|ACE83473.1| DNA polymerase II [Cellvibrio japonicus Ueda107]
          Length = 798

 Score = 62.4 bits (150), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 60/211 (28%), Positives = 94/211 (44%), Gaps = 20/211 (9%)

Query: 772 DSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLEL-D 830
           + L  A K I+NSFYG +   G R++   ++  +T  G  IIQ +R  IE+ G  +   D
Sbjct: 484 EPLSYAIKIIMNSFYGVLGSTGCRFFDPRISSSITLRGHDIIQRSRDWIEQQGYTVIYGD 543

Query: 831 TDGIWCVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTY 890
           TD ++  L          +   L         C  + V +AR   N  +Q   + + + Y
Sbjct: 544 TDSLFVWL----------ENNCLGHAPKSPQQCNSIGVRLAR-ELNAWWQ---ETLQQDY 589

Query: 891 ETHSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAEL--KGFEIKRRGEL 948
           + +S   I++E    Y   ++P  +   +  KKRYA   D     E+  KG E  R    
Sbjct: 590 QLNSALEIQYETH--YLRFLMPTIRGSELGTKKRYAGLIDVNGQREMIFKGLENVRTDWT 647

Query: 949 KLIKVFQAELFDKFLHGST-IEECYSAVAAV 978
           +L K FQA+L+ K   G   +E   +A  AV
Sbjct: 648 QLAKQFQADLYRKVFDGEDYVEYVRTATTAV 678


>gi|119872328|ref|YP_930335.1| DNA polymerase I [Pyrobaculum islandicum DSM 4184]
 gi|119673736|gb|ABL87992.1| replicative DNA polymerase I [Pyrobaculum islandicum DSM 4184]
          Length = 854

 Score = 62.4 bits (150), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 98/393 (24%), Positives = 162/393 (41%), Gaps = 67/393 (17%)

Query: 173 SILTGKREQRPQDFLDCIVDLREYDVPYHIRFAIDNDVRCGQWYDVSISSTGPL------ 226
           SI  GK   R     D + +  E  + YH  +  D +V  G WY  + +   P+      
Sbjct: 129 SIGGGKNSLR-----DILGETWESRIKYHHSYLFDRNVIPGMWYQTNGNGLTPVEIVIPP 183

Query: 227 -----------------LEKRVDLLQRAEVHV--CAFDIET-TKLPLKFPD---ADYDII 263
                             E+ + L Q    H+   A D+E  T    K PD   A+Y+II
Sbjct: 184 EVRQTLSSVFKPEHAKVAEEWIPLFQAPVPHIRRVAIDVEVYTPQENKIPDPKEAEYEII 243

Query: 264 MMISYMLDG-QGYLIINRECVGEDIE-DLEYTPKPEFEGYFKVTNVNNEIELLRLWFAHM 321
            +     DG +  L++ R     +IE +L+Y  +P++E  F     ++E EL+R  F  +
Sbjct: 244 SVALVGSDGLKRVLMLKRP----EIEAELKY--RPDYEILF----FDSEYELIREVFKTI 293

Query: 322 QEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDKNQGECRAKFACHLDC--- 378
             V+  I +T+NGD FD P+L  RA   G    EE+     ++          H+D    
Sbjct: 294 --VQYPIVITFNGDNFDLPYLYNRAIALGIP-REEIPITVKRDY--VSVAPGVHIDMYKF 348

Query: 379 FAWVKRDSY----LPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQMMASYSVSDA 434
           FA    ++Y    + +G +GL  +  A LG   +E   +++ R    +   +A Y+  DA
Sbjct: 349 FAIKAIEAYAFGGVYRGERGLDGIAYAILGVGKVE-RQKNVSRMGYWE---LAEYNYRDA 404

Query: 435 VATYYLYM---TYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVICPNKH 491
           + T Y  +     V   I  L+ I  M  +++ R         +L  +  K   + PNK 
Sbjct: 405 LITLYFTLYNSEMVMKLIMLLSRIAKMPIEDITRSQVSAWIRNMLYYEHRKRGWLIPNKE 464

Query: 492 QSDPEK--FYRNHLLESETYIGGHVECLESGVF 522
               EK   +   +++ + Y G  V     G+F
Sbjct: 465 DILKEKGAVHTKAIIKGKKYAGAVVLDPPLGIF 497


>gi|195477860|ref|XP_002086418.1| GE23127 [Drosophila yakuba]
 gi|194186208|gb|EDW99819.1| GE23127 [Drosophila yakuba]
          Length = 1092

 Score = 62.0 bits (149), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 59/199 (29%), Positives = 87/199 (43%), Gaps = 34/199 (17%)

Query: 185 DFLDCIVDLREYDVPYHIRFAIDNDVRCGQWYDVSI-------SSTGPLLEKR----VDL 233
           DF DC     E ++ + IRF +D DV    W ++ +       S + PL E R    VD+
Sbjct: 217 DFQDCRA--FENNIDFDIRFMVDTDVVGCNWIELPMGHWRIRNSHSKPLPESRCQIEVDV 274

Query: 234 L--------------QRAEVHVCAFDIETTKLPLKFPDADYDIIMMISYMLDGQGYLIIN 279
                          + A   + +FDIE       FP+A  D ++ I+ M+  QG     
Sbjct: 275 AFDRFISHEPEGEWSKVAPFRILSFDIECAGRKGIFPEAKMDPVIQIANMVIRQG----E 330

Query: 280 RECVGEDIEDLEYTPKPEFEGYFKVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDW 339
           RE    ++  L     P      +V   + E ++L  W A ++EV P I   YN + FD+
Sbjct: 331 REPFIRNVFTLNQC-APIIGS--QVLCHDKETQMLDKWSAFVREVDPDILTGYNINNFDF 387

Query: 340 PFLETRAAHHGFKMSEELG 358
           P+L  RAAH   K  E LG
Sbjct: 388 PYLINRAAHLKVKNFEYLG 406


>gi|343506524|ref|ZP_08744010.1| DNA polymerase II [Vibrio ichthyoenteri ATCC 700023]
 gi|342802443|gb|EGU37858.1| DNA polymerase II [Vibrio ichthyoenteri ATCC 700023]
          Length = 787

 Score = 61.6 bits (148), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 51/197 (25%), Positives = 82/197 (41%), Gaps = 35/197 (17%)

Query: 777 AHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWC 836
           A K I+NSFYG +   G R++   +A  +T  G +I++  +LLIE  G          + 
Sbjct: 494 AIKIIMNSFYGVLGSSGCRFFDTRLASSITMRGHEIMKQTKLLIEAQG----------YQ 543

Query: 837 VLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSE- 895
           V+ G     F                 V LN  V +   +     LV+ +++ +  H + 
Sbjct: 544 VIYGDTDSTF-----------------VSLNGQVTQAQADSIGHALVEHINQWWTEHLQQ 586

Query: 896 -----CSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAEL--KGFEIKRRGEL 948
                  +E E +  YK  ++P  + +    KKRYA    +G   ++  KG E  R    
Sbjct: 587 KYNLVSILEIEYETHYKKFLMPTIRGQETGSKKRYAGLIGEGEQEKIIFKGLESARTDWT 646

Query: 949 KLIKVFQAELFDKFLHG 965
            L + FQ  L+D   HG
Sbjct: 647 PLAQSFQQRLYDMVFHG 663


>gi|441501888|ref|ZP_20983901.1| DNA polymerase II [Photobacterium sp. AK15]
 gi|441430327|gb|ELR67777.1| DNA polymerase II [Photobacterium sp. AK15]
          Length = 755

 Score = 61.6 bits (148), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 59/209 (28%), Positives = 87/209 (41%), Gaps = 29/209 (13%)

Query: 777 AHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLEL---DTDG 833
           A K I+NSFYG +   G R++   +A  +T  G +I++  R LIE  GK  E+   DTD 
Sbjct: 462 AIKIIMNSFYGVLGSSGCRFFDHRLASSITMRGHEIMKTTRELIE--GKGYEVIYGDTDS 519

Query: 834 IWCVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETH 893
            +  L      N  F +K+  K   I    V        N+  ++Y              
Sbjct: 520 TFVSL------NAAFSSKEADK---IGQDLVAYINQWWTNHLKEEYNL------------ 558

Query: 894 SECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAEL--KGFEIKRRGELKLI 951
            E ++E E +  Y   ++P  + +    KKRYA     G   E+  KG E  R    +L 
Sbjct: 559 -ESALELEYETHYHKFLMPTIRGQETGSKKRYAGLVKRGDNEEIVFKGLETVRTDWTQLA 617

Query: 952 KVFQAELFDKFLHGSTIEECYSAVAAVAN 980
           + FQ  L+ K  H   +EE        AN
Sbjct: 618 QEFQKTLYYKVFHDQDVEEYVRQYVEKAN 646


>gi|86148832|ref|ZP_01067097.1| DNA polymerase II [Vibrio sp. MED222]
 gi|85833383|gb|EAQ51576.1| DNA polymerase II [Vibrio sp. MED222]
          Length = 787

 Score = 61.6 bits (148), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 52/191 (27%), Positives = 83/191 (43%), Gaps = 25/191 (13%)

Query: 777 AHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIG-KPLELDTDGIW 835
           A K I+NSFYG +   G R++   +A  +T  G +I++  ++LIE  G + +  DTD  +
Sbjct: 494 AIKIIMNSFYGVLGSSGCRFFDTRLASSITMRGHEIMKQTKVLIEDKGYQVIYGDTDSTF 553

Query: 836 CVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSE 895
             L GSF +         ++   I +  V    D   N+  + Y  L   +   YETH  
Sbjct: 554 VSLNGSFEQ---------EQADEIGHSLVAYINDWWTNHLKETY-NLTSILELEYETH-- 601

Query: 896 CSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAEL--KGFEIKRRGELKLIKV 953
                     Y+  ++P  +      KKRYA   + G   ++  KG E  R     L + 
Sbjct: 602 ----------YRKFLMPTIRGSETGSKKRYAGLINQGDQEKIIFKGLESARTDWTPLAQQ 651

Query: 954 FQAELFDKFLH 964
           FQ  L++   H
Sbjct: 652 FQQTLYEMVFH 662


>gi|348027543|ref|YP_004870229.1| DNA polymerase II [Glaciecola nitratireducens FR1064]
 gi|347944886|gb|AEP28236.1| DNA polymerase II [Glaciecola nitratireducens FR1064]
          Length = 785

 Score = 61.2 bits (147), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 50/197 (25%), Positives = 86/197 (43%), Gaps = 25/197 (12%)

Query: 777 AHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIG-KPLELDTDGIW 835
           A K ++NSFYG +   G  +Y   +A  +T  G  I+Q     IE+ G + +  DTD  +
Sbjct: 492 AIKILMNSFYGVLGSGGCPFYDTRLASSITMRGHDIMQTTAKWIEQAGYEVIYGDTDSTF 551

Query: 836 CVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSE 895
             L G F           ++ + I     +          N ++Q   D + +T++   +
Sbjct: 552 VWLNGEFSN---------QQAMQIGQSLAL--------EINQKWQ---DNIQQTHQL--D 589

Query: 896 CSIEFEVDGPYKAMILPASKEEGILIKKRYAVF--NDDGTLAELKGFEIKRRGELKLIKV 953
           C +E E +  +  +++P  +   +  KKRYA    N DG     KG E  R    +L K 
Sbjct: 590 CDLEIEFETHFSQLLMPTIRGSELGSKKRYAGLKTNKDGDELIFKGLETVRSDWTQLAKE 649

Query: 954 FQAELFDKFLHGSTIEE 970
           FQ +L+     G  +++
Sbjct: 650 FQLKLYTMVFAGQNVQD 666


>gi|195590609|ref|XP_002085037.1| GD12524 [Drosophila simulans]
 gi|194197046|gb|EDX10622.1| GD12524 [Drosophila simulans]
          Length = 1096

 Score = 61.2 bits (147), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 60/200 (30%), Positives = 89/200 (44%), Gaps = 36/200 (18%)

Query: 185 DFLDCIVDLREYDVPYHIRFAIDNDVRCGQWYDVSI-------SSTGPLLEKR----VDL 233
           DF DC     E ++ + IRF +D DV    W ++ +       S + PL E R    VD+
Sbjct: 217 DFQDCRA--FENNIDFDIRFMVDTDVVGCNWIELPMGHWRIRNSHSKPLPESRCQIEVDV 274

Query: 234 L--------------QRAEVHVCAFDIETTKLPLKFPDADYDIIMMISYMLDGQGYLIIN 279
                          + A   + +FDIE       FP+A  D ++ I+ M+  QG     
Sbjct: 275 AFDRFISHEPEGEWSKVAPFRILSFDIECAGRKGIFPEAKMDPVIQIANMVIRQG----E 330

Query: 280 RECVGEDIEDL-EYTPKPEFEGYFKVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFD 338
           RE    ++  L E  P     G  +V   + E ++L  W A ++EV P I   YN + FD
Sbjct: 331 REPFIRNVFTLNECAP---IIGS-QVLCHDKETQMLDKWSAFVREVDPDILTGYNINNFD 386

Query: 339 WPFLETRAAHHGFKMSEELG 358
           +P+L  RAAH   +  E LG
Sbjct: 387 FPYLINRAAHLKVRNFEYLG 406


>gi|373850265|ref|ZP_09593066.1| DNA polymerase B region [Opitutaceae bacterium TAV5]
 gi|372476430|gb|EHP36439.1| DNA polymerase B region [Opitutaceae bacterium TAV5]
          Length = 773

 Score = 61.2 bits (147), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 89/365 (24%), Positives = 149/365 (40%), Gaps = 83/365 (22%)

Query: 724  YVDTVRSFRDRRYEYKGLNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHKCILN 783
            ++  +RS R+ R  YK L          A+++  + +  EAQ       + Q + K ++N
Sbjct: 460  FIPLLRSLREYRLRYKQL----------ARSAPTADERAEAQ-------ARQTSFKILIN 502

Query: 784  SFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKP----LELDTDGIWCVLP 839
            SFYGY+   GAR+   E+A  VT  G +++Q    LI+         LE DTDGI+   P
Sbjct: 503  SFYGYLGFSGARFGDGELAAEVTRRGRELLQT---LIDAFAAEGCTILEADTDGIYLSAP 559

Query: 840  GSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIE 899
                 ++  + + L +K+T   P                                   IE
Sbjct: 560  -----DYHDRPEALLEKITPVLP---------------------------------PGIE 581

Query: 900  FEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELF 959
             E DG Y+AM    SK         YA+++ +     L+G  ++ RG    ++     L 
Sbjct: 582  LEYDGRYEAMFCYKSKN--------YALYDGETKKIILRGSALRSRGTEPCLRRLGTMLI 633

Query: 960  DKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLADYGEQK 1019
              FL G++ +     +A +    +   ++   D+A SE++    ++  +   + + G+ +
Sbjct: 634  -HFLLGASADSPLDEIARL-RETIGRREHPVADLAKSEVLGQNPDAYEL--WINNGGKPR 689

Query: 1020 SCAVTTARRLSDFLGDTMVKDKGLRCQ-YIVACEPQGTPVSERAVPVAIF--ETDAEIMK 1076
              A   A +L      T     G R   YIV   P  T   +RA PVA++  ET      
Sbjct: 690  RPAAEAALQL------TPRPRMGERIAYYIVPRTPGQTADWQRARPVALYDAETAPYDAS 743

Query: 1077 FYLRK 1081
            +YL K
Sbjct: 744  YYLEK 748


>gi|84394224|ref|ZP_00992952.1| DNA polymerase II [Vibrio splendidus 12B01]
 gi|84375138|gb|EAP92057.1| DNA polymerase II [Vibrio splendidus 12B01]
          Length = 787

 Score = 61.2 bits (147), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 53/191 (27%), Positives = 82/191 (42%), Gaps = 25/191 (13%)

Query: 777 AHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIG-KPLELDTDGIW 835
           A K I+NSFYG +   G R++   +A  +T  G +I++  ++LIE  G + +  DTD  +
Sbjct: 494 AIKIIMNSFYGVLGSSGCRFFDTRLASSITMRGHEIMKQTKVLIEDKGYQVIYGDTDSTF 553

Query: 836 CVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSE 895
             L GS+         D +K   I    V    D   N+  + Y  L   +   YETH  
Sbjct: 554 VSLNGSY---------DQQKADEIGNALVAYINDWWTNHLKETY-NLTSILELEYETH-- 601

Query: 896 CSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAEL--KGFEIKRRGELKLIKV 953
                     Y+  ++P  +      KKRYA   + G   ++  KG E  R     L + 
Sbjct: 602 ----------YRKFLMPTIRGSETGSKKRYAGLINQGDQEKIIFKGLESARTDWTPLAQQ 651

Query: 954 FQAELFDKFLH 964
           FQ  L++   H
Sbjct: 652 FQQTLYEMVFH 662


>gi|300715286|ref|YP_003740089.1| DNA polymerase II [Erwinia billingiae Eb661]
 gi|299061122|emb|CAX58229.1| DNA polymerase II [Erwinia billingiae Eb661]
          Length = 786

 Score = 61.2 bits (147), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 78/359 (21%), Positives = 135/359 (37%), Gaps = 76/359 (21%)

Query: 725  VDTVRSFRDRRYEYKG------LNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAH 778
             D+V  F+  R+          +N++W+G+   AK  GN                L  A 
Sbjct: 450  TDSVSGFKGARFSRTTHCLPEIVNQIWQGR-EAAKKEGNK--------------PLSQAL 494

Query: 779  KCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVL 838
            K I+N+FYG +     R++   +A  +T  G +I++  + L+E  G          + V+
Sbjct: 495  KIIMNAFYGVLGTSACRFFDPRLASSITLRGHEIMRQTKELVEAEG----------YDVI 544

Query: 839  PGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETH----- 893
             G     F +  K   ++                 + N   Q LV+ V+  ++ H     
Sbjct: 545  YGDTDSTFVWLKKPHDQQ-----------------SANAIGQQLVEKVNAWWKQHLQQAF 587

Query: 894  -SECSIEFEVDGPYKAMILPASKEEGILIKKRYA--VFNDDGTLAELKGFEIKRRGELKL 950
              E ++E E +  +   ++P  +      KKRYA  +   D      KG E  R     L
Sbjct: 588  GLESALELEFETHFSRFLMPTIRGAEQGSKKRYAGLICEGDSERMVFKGLETVRTDWTPL 647

Query: 951  IKVFQAELFDKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSK 1010
             K FQ EL+ +                    + D +    + + D EL D +     + +
Sbjct: 648  AKNFQQELYRRIFKKLP--------------YRDYILETVRQLLDGELDDQLVYGKRLRR 693

Query: 1011 SLADYGEQKSCAVTTARRLSDF---LGDTMVKDKGLRCQYIVACE-PQGTPVSERAVPV 1065
             L DY       V  AR   +F    G  ++  KG + +Y++A   P+  P+  R  P+
Sbjct: 694  PLDDYQRNVPPHVRAARIADEFNEKQGRPLLYQKGGKIRYVMATSGPE--PLEARITPL 750


>gi|386080695|ref|YP_005994220.1| DNA polymerase II PolB [Pantoea ananatis PA13]
 gi|354989876|gb|AER34000.1| DNA polymerase II PolB [Pantoea ananatis PA13]
          Length = 786

 Score = 61.2 bits (147), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 84/355 (23%), Positives = 131/355 (36%), Gaps = 68/355 (19%)

Query: 725  VDTVRSFRDRRYEYKG------LNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAH 778
             D+V  FR+ R+  +       + ++W+G+   AK  GN                L  A 
Sbjct: 450  ADSVPGFREARFSRETHCLPAIVEQIWQGR-ETAKTQGNK--------------PLSQAL 494

Query: 779  KCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIG-KPLELDTDGIWCV 837
            K I+N+FYG +     R++   +A  +T  G  I+Q  R LIE  G   +  DTD  +  
Sbjct: 495  KIIMNAFYGVLGTSACRFFDPRLASSITLRGHAIMQQTRELIEAEGYDVIYGDTDSTFVW 554

Query: 838  LPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECS 897
            L  +         +D  +   I            R +   QY  L   +   YE H    
Sbjct: 555  LKSA---------RDEDEAEAIGRALAGKVNGWWREHLQQQY-GLTSALELEYENH---- 600

Query: 898  IEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAEL--KGFEIKRRGELKLIKVFQ 955
                    +   ++P  +      KKRYA    +G    +  KG E  R     L + FQ
Sbjct: 601  --------FCRFLMPTIRGAEQGSKKRYAGLIREGESERMVFKGLESVRTDWTPLAQQFQ 652

Query: 956  AELFDKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLADY 1015
             EL+ +  H                 W D + N    +   EL D +     + + L +Y
Sbjct: 653  QELYSRIFHRQP--------------WEDYVRNTVAQLLAGELDDRLIYKKRLRRPLNEY 698

Query: 1016 GEQKSCAVTTARRLSD----FLGDTMVKDKGLRCQYIVAC-EPQGTPVSERAVPV 1065
             E+       A RL+D     LG  +    G R +Y++A   P+  PV  R  P+
Sbjct: 699  -ERNVPPHVRAARLADEQNRKLGRPLQYQTGGRIRYVIATGGPE--PVEARTTPL 750


>gi|194873189|ref|XP_001973157.1| GG13508 [Drosophila erecta]
 gi|190654940|gb|EDV52183.1| GG13508 [Drosophila erecta]
          Length = 1092

 Score = 61.2 bits (147), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 60/200 (30%), Positives = 89/200 (44%), Gaps = 36/200 (18%)

Query: 185 DFLDCIVDLREYDVPYHIRFAIDNDVRCGQWYDVSI-------SSTGPLLEKR----VDL 233
           DF DC     E ++ + IRF +D DV    W ++ +       + + PL E R    VD+
Sbjct: 217 DFQDCRA--FENNIDFDIRFMVDTDVVGCNWIELPMGHWRRRNTHSKPLPESRCQIEVDV 274

Query: 234 L--------------QRAEVHVCAFDIETTKLPLKFPDADYDIIMMISYMLDGQGYLIIN 279
                          + A   + +FDIE       FP+A  D ++ I+ M+  QG     
Sbjct: 275 AFDRFISHEPEGEWSKVAPFRILSFDIECAGRKGIFPEAKMDPVIQIANMVIRQG----E 330

Query: 280 RECVGEDIEDL-EYTPKPEFEGYFKVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFD 338
           RE    ++  L E  P     G  +V   + E ++L  W A ++EV P I   YN + FD
Sbjct: 331 REPFIRNVFTLNECAP---IIGS-QVLCHDKETQMLDKWSAFVREVDPDILTGYNINNFD 386

Query: 339 WPFLETRAAHHGFKMSEELG 358
           +P+L  RAAH   K  E LG
Sbjct: 387 FPYLINRAAHLKVKNFEYLG 406


>gi|429216955|ref|YP_007174945.1| DNA polymerase pol2 [Caldisphaera lagunensis DSM 15908]
 gi|429133484|gb|AFZ70496.1| DNA polymerase pol2 [Caldisphaera lagunensis DSM 15908]
          Length = 799

 Score = 61.2 bits (147), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 81/377 (21%), Positives = 151/377 (40%), Gaps = 61/377 (16%)

Query: 187 LDCIVDLREYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLLEKRVDLLQRAE-------- 238
           +D + ++ E D+ +  R+ +D ++   +WY V + +       RVD +   +        
Sbjct: 111 IDGVKEVLEADIRFSFRYTLDKNLYPMRWYKVKVKAIDNKFNYRVDEIYEIDSDILEDET 170

Query: 239 ---------VHVCAFDIETTKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIED 289
                    + + AFDIE    P + PD   D I++I+   +     II  E  G D   
Sbjct: 171 RINVDPLENLKIMAFDIEVYN-PQRTPDPSKDPIILIAIKFNYSKDPII-LEAKGHDDSQ 228

Query: 290 LEYTPKPEFEGYFKVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHH 349
           L                +++ IEL+R       +  P I V YN + FDWP++  R+  +
Sbjct: 229 L----------------LHDFIELIR-------KEDPDIIVGYNQNRFDWPYIIERSKVY 265

Query: 350 GFKMSEELGFQCDKNQGECRAKFACHLDCFAWVKRDSY-LPQGSQGLKAVTKAKLGYDPL 408
             K+  ++G + D            H      +  D Y   +  Q +K  +  ++  D L
Sbjct: 266 KIKL--DIGRKAD---SAPNPSVFGHYSIHGRLNVDLYDFAEELQEIKFKSLDEVA-DYL 319

Query: 409 EVNPED---------MVRF--AKEKPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIP 457
            V P+D         + ++    +K   +  Y++ D  +T  L   ++ PF   L+ I  
Sbjct: 320 GVMPKDKRVNIDWWLIAQYWDNMDKRSTLKQYAIDDVESTLGLAYKFL-PFGAQLSIISG 378

Query: 458 MSPDEVLRKGSGTLCEMLLMVQAYKANVICPNKHQSDPEKFYRNHLLESETYIGGHVECL 517
           +  D+V+        E  LM +A K N + PN+ + + E +    +L+ E  I  +V  L
Sbjct: 379 LPMDQVVAASVAFRLEARLMREAKKKNELMPNRIERNIETYIGAVVLKPEPGIHENVAVL 438

Query: 518 ESGVFRSDLPTSFKLDP 534
           +       +   + + P
Sbjct: 439 DFASMYPSIMVKYNIGP 455


>gi|325969294|ref|YP_004245486.1| DNA polymerase Pol2 [Vulcanisaeta moutnovskia 768-28]
 gi|323708497|gb|ADY01984.1| DNA polymerase Pol2 [Vulcanisaeta moutnovskia 768-28]
          Length = 784

 Score = 61.2 bits (147), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 84/447 (18%), Positives = 169/447 (37%), Gaps = 97/447 (21%)

Query: 84  FRPYFYAATKEKMEMDVEAYLRRRYESQIADIEILEKEDLDLKNHLSGLHKSYLKISFDT 143
           FRPYFY      +  +V   ++R+ E ++ ++EI                          
Sbjct: 40  FRPYFYVLPSGDVN-NVFTNVKRKLEGKVLNVEI-------------------------- 72

Query: 144 VQQLMDVKKDLLHVVERNQAKFDAAEAYESILTGKREQRPQDF-LDCIVDLREYDVPYHI 202
                 VK+ L         + DA +   +I    RE R     +  + D+ E D+ +  
Sbjct: 73  ------VKRRLF------SNEVDAIKVIATIPEKVRELRELAAEVPGVEDVLEADIRFSQ 120

Query: 203 RFAIDNDVRCGQW------------YDVSISSTGPLLEKRVDLLQRAEVHVCAFDIETTK 250
           R+ +D  ++   W            Y V +        + ++  +     + AFDIE   
Sbjct: 121 RYLLDMGIKPSNWVVVDQCEETKGNYQVDLVCLAKTRPRMIEEHKLPSFKILAFDIEVYN 180

Query: 251 LPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNVNNE 310
            P   P+ D D +++IS M    G  +                        F V +  N+
Sbjct: 181 -PRGMPNPDRDPVIIISTMTKEDGVKM------------------------FVVNDDKND 215

Query: 311 IELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDKNQGECRA 370
            +++R +  + +   P + V YN + FDWP+L  R++  G +++  L    +  +     
Sbjct: 216 AKIIREFLDYFKRYDPDVVVGYNNNGFDWPYLVNRSSRIGVRLA--LSRMSNPPEPSVYG 273

Query: 371 KFA----CHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFA------- 419
            ++     ++D + +++       G   +K++ +A   +  ++ +   ++          
Sbjct: 274 HWSIIGRANVDLYNFIEE-----VGEIKVKSLDRAAEFFGIMKRDERVLIPGHRIHEYWD 328

Query: 420 -KEKPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMV 478
            K K   +  Y+  D V+TY L    + PF   L++I  +  D+V     G   E ++  
Sbjct: 329 DKSKRDQLLKYARDDVVSTYGL-AEKLLPFAIQLSSISGLPLDQVGAASVGARVEWMIFY 387

Query: 479 QAYKANVICPNKHQSDPEKFYRNHLLE 505
           +A K   + PN+ +   E +    +LE
Sbjct: 388 EAVKRGELAPNREERPYETYKGAVVLE 414


>gi|24664937|ref|NP_524099.2| DNA-polymerase-delta [Drosophila melanogaster]
 gi|13124718|sp|P54358.2|DPOD1_DROME RecName: Full=DNA polymerase delta catalytic subunit
 gi|7294203|gb|AAF49555.1| DNA-polymerase-delta [Drosophila melanogaster]
 gi|21064603|gb|AAM29531.1| RE60511p [Drosophila melanogaster]
          Length = 1092

 Score = 61.2 bits (147), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 60/200 (30%), Positives = 89/200 (44%), Gaps = 36/200 (18%)

Query: 185 DFLDCIVDLREYDVPYHIRFAIDNDVRCGQWYDVSI-------SSTGPLLEKR----VDL 233
           DF DC     E ++ + IRF +D DV    W ++ +       S + PL E R    VD+
Sbjct: 217 DFQDCRA--FENNIDFDIRFMVDTDVVGCNWIELPMGHWRIRNSHSKPLPESRCQIEVDV 274

Query: 234 L--------------QRAEVHVCAFDIETTKLPLKFPDADYDIIMMISYMLDGQGYLIIN 279
                          + A   + +FDIE       FP+A  D ++ I+ M+  QG     
Sbjct: 275 AFDRFISHEPEGEWSKVAPFRILSFDIECAGRKGIFPEAKIDPVIQIANMVIRQG----E 330

Query: 280 RECVGEDIEDL-EYTPKPEFEGYFKVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFD 338
           RE    ++  L E  P     G  +V   + E ++L  W A ++EV P I   YN + FD
Sbjct: 331 REPFIRNVFTLNECAP---IIGS-QVLCHDKETQMLDKWSAFVREVDPDILTGYNINNFD 386

Query: 339 WPFLETRAAHHGFKMSEELG 358
           +P+L  RAAH   +  E LG
Sbjct: 387 FPYLLNRAAHLKVRNFEYLG 406


>gi|1027513|emb|CAA61369.1| DNA polymerase delta [Drosophila melanogaster]
          Length = 1092

 Score = 60.8 bits (146), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 60/200 (30%), Positives = 89/200 (44%), Gaps = 36/200 (18%)

Query: 185 DFLDCIVDLREYDVPYHIRFAIDNDVRCGQWYDVSI-------SSTGPLLEKR----VDL 233
           DF DC     E ++ + IRF +D DV    W ++ +       S + PL E R    VD+
Sbjct: 217 DFQDCRA--FENNIDFDIRFMVDTDVVGCNWIELPMGHWRIRNSHSKPLPESRCQIEVDV 274

Query: 234 L--------------QRAEVHVCAFDIETTKLPLKFPDADYDIIMMISYMLDGQGYLIIN 279
                          + A   + +FDIE       FP+A  D ++ I+ M+  QG     
Sbjct: 275 AFDRFISHEPEGEWSKVAPFRILSFDIECAGRKGIFPEAKIDPVIQIANMVIRQG----E 330

Query: 280 RECVGEDIEDL-EYTPKPEFEGYFKVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFD 338
           RE    ++  L E  P     G  +V   + E ++L  W A ++EV P I   YN + FD
Sbjct: 331 REPFIRNVFTLNECAP---IIGS-QVLCHDKETQMLDKWSAFVREVDPDILTGYNINNFD 386

Query: 339 WPFLETRAAHHGFKMSEELG 358
           +P+L  RAAH   +  E LG
Sbjct: 387 FPYLLNRAAHLKVRNFEYLG 406


>gi|386014636|ref|YP_005932913.1| DNA polymerase II PolB [Pantoea ananatis AJ13355]
 gi|327392695|dbj|BAK10117.1| DNA polymerase II PolB [Pantoea ananatis AJ13355]
          Length = 803

 Score = 60.8 bits (146), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 84/355 (23%), Positives = 131/355 (36%), Gaps = 68/355 (19%)

Query: 725  VDTVRSFRDRRYEYKG------LNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAH 778
             D+V  FR+ R+  +       + ++W+G+   AK  GN                L  A 
Sbjct: 467  ADSVPGFREARFSRETHCLPAIVEQIWQGR-ETAKTQGNK--------------PLSQAL 511

Query: 779  KCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIG-KPLELDTDGIWCV 837
            K I+N+FYG +     R++   +A  +T  G  I+Q  R LIE  G   +  DTD  +  
Sbjct: 512  KIIMNAFYGVLGTSACRFFDPRLASSITLRGHAIMQQTRELIEAEGYDVIYGDTDSTFVW 571

Query: 838  LPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECS 897
            L  +         +D  +   I            R +   QY  L   +   YE H    
Sbjct: 572  LKSA---------RDEDEAEAIGRALAGKVNGWWREHLQQQY-GLTSALELEYENH---- 617

Query: 898  IEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAEL--KGFEIKRRGELKLIKVFQ 955
                    +   ++P  +      KKRYA    +G    +  KG E  R     L + FQ
Sbjct: 618  --------FCRFLMPTIRGAEQGSKKRYAGLIREGESERMVFKGLESVRTDWTPLAQQFQ 669

Query: 956  AELFDKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLADY 1015
             EL+ +  H                 W D + N    +   EL D +     + + L +Y
Sbjct: 670  QELYSRIFH--------------RQPWEDYVRNTVAQLLAGELDDRLIYKKRLRRPLNEY 715

Query: 1016 GEQKSCAVTTARRLSD----FLGDTMVKDKGLRCQYIVAC-EPQGTPVSERAVPV 1065
             E+       A RL+D     LG  +    G R +Y++A   P+  PV  R  P+
Sbjct: 716  -ERNVPPHVRAARLADEQNRKLGRPLQYQTGGRIRYVIATGGPE--PVEARTTPL 767


>gi|291616243|ref|YP_003518985.1| PolB [Pantoea ananatis LMG 20103]
 gi|378768578|ref|YP_005197051.1| DNA polymerase II PolB [Pantoea ananatis LMG 5342]
 gi|291151273|gb|ADD75857.1| PolB [Pantoea ananatis LMG 20103]
 gi|365188064|emb|CCF11014.1| DNA polymerase II PolB [Pantoea ananatis LMG 5342]
          Length = 803

 Score = 60.8 bits (146), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 84/355 (23%), Positives = 131/355 (36%), Gaps = 68/355 (19%)

Query: 725  VDTVRSFRDRRYEYKG------LNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAH 778
             D+V  FR+ R+  +       + ++W+G+   AK  GN                L  A 
Sbjct: 467  ADSVPGFREARFSRETHCLPAIVEQIWQGR-ETAKTQGNK--------------PLSQAL 511

Query: 779  KCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIG-KPLELDTDGIWCV 837
            K I+N+FYG +     R++   +A  +T  G  I+Q  R LIE  G   +  DTD  +  
Sbjct: 512  KIIMNAFYGVLGTSACRFFDPRLASSITLRGHAIMQQTRELIEAEGYDVIYGDTDSTFVW 571

Query: 838  LPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECS 897
            L  +         +D  +   I            R +   QY  L   +   YE H    
Sbjct: 572  LKSA---------RDEDEAEAIGRALAGKVNGWWREHLQQQY-GLTSALELEYENH---- 617

Query: 898  IEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAEL--KGFEIKRRGELKLIKVFQ 955
                    +   ++P  +      KKRYA    +G    +  KG E  R     L + FQ
Sbjct: 618  --------FCRFLMPTIRGAEQGSKKRYAGLIREGESERMVFKGLESVRTDWTPLAQQFQ 669

Query: 956  AELFDKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLADY 1015
             EL+ +  H                 W D + N    +   EL D +     + + L +Y
Sbjct: 670  QELYSRIFHRQP--------------WEDYVRNTVAQLLAGELDDRLIYKKRLRRPLNEY 715

Query: 1016 GEQKSCAVTTARRLSD----FLGDTMVKDKGLRCQYIVAC-EPQGTPVSERAVPV 1065
             E+       A RL+D     LG  +    G R +Y++A   P+  PV  R  P+
Sbjct: 716  -ERNVPPHVRAARLADEQNRKLGRPLQYQTGGRIRYVIATGGPE--PVEARTTPL 767


>gi|218709939|ref|YP_002417560.1| DNA polymerase II [Vibrio splendidus LGP32]
 gi|218322958|emb|CAV19135.1| DNA polymerase II [Vibrio splendidus LGP32]
          Length = 787

 Score = 60.8 bits (146), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 52/191 (27%), Positives = 83/191 (43%), Gaps = 25/191 (13%)

Query: 777 AHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIG-KPLELDTDGIW 835
           A K I+NSFYG +   G R++   +A  +T  G +I++  ++LIE  G + +  DTD  +
Sbjct: 494 AIKIIMNSFYGVLGSSGCRFFDTRLASSITMRGHEIMKQTKVLIEDKGYQVIYGDTDSTF 553

Query: 836 CVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSE 895
             L GSF +         ++   I +  V    D   N+  + Y  L   +   YETH  
Sbjct: 554 VSLNGSFEQ---------EQADEIGHSLVAYINDWWTNHLKEVY-NLTSILELEYETH-- 601

Query: 896 CSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAEL--KGFEIKRRGELKLIKV 953
                     Y+  ++P  +      KKRYA   + G   ++  KG E  R     L + 
Sbjct: 602 ----------YRKFLMPTIRGSETGSKKRYAGLINQGDQEKIIFKGLESARTDWTPLAQQ 651

Query: 954 FQAELFDKFLH 964
           FQ  L++   H
Sbjct: 652 FQQTLYEMVFH 662


>gi|391228346|ref|ZP_10264552.1| DNA polymerase elongation subunit (family B) [Opitutaceae bacterium
            TAV1]
 gi|391218007|gb|EIP96427.1| DNA polymerase elongation subunit (family B) [Opitutaceae bacterium
            TAV1]
          Length = 773

 Score = 60.8 bits (146), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 89/365 (24%), Positives = 149/365 (40%), Gaps = 83/365 (22%)

Query: 724  YVDTVRSFRDRRYEYKGLNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHKCILN 783
            ++  +RS R+ R  YK L          A+++  + +  EAQ       + Q + K ++N
Sbjct: 460  FIPLLRSLREYRLRYKQL----------ARSAPTADERAEAQ-------ARQTSFKILIN 502

Query: 784  SFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKP----LELDTDGIWCVLP 839
            SFYGY+   GAR+   E+A  VT  G +++Q    LI+         LE DTDGI+   P
Sbjct: 503  SFYGYLGFSGARFGDGELAAEVTRRGRELLQT---LIDAFAAEGCTILEADTDGIYLSAP 559

Query: 840  GSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIE 899
                 ++  + + L +K+T   P                                   IE
Sbjct: 560  -----DYHDRPEALLEKITPVLP---------------------------------PGIE 581

Query: 900  FEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELF 959
             E DG Y+AM    SK         YA+++ +     L+G  ++ RG    ++     L 
Sbjct: 582  LEYDGRYEAMFCYKSKN--------YALYDGETKKIILRGSALRSRGTEPCLRRLGTMLI 633

Query: 960  DKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLADYGEQK 1019
              FL G++ +     +A +    +   ++   D+A SE++    ++  +   + + G+ +
Sbjct: 634  -HFLLGASADSPLDEIARL-RETIGRREHPVADLAKSEVLGQNPDAYEL--WINNGGKPR 689

Query: 1020 SCAVTTARRLSDFLGDTMVKDKGLRCQ-YIVACEPQGTPVSERAVPVAIF--ETDAEIMK 1076
              A   A +L      T     G R   YIV   P  T   +RA PVA++  ET      
Sbjct: 690  RPAAEAALQL------TPRPRMGERIAYYIVPRTPGRTADWQRARPVALYDAETAPYDAS 743

Query: 1077 FYLRK 1081
            +YL K
Sbjct: 744  YYLEK 748


>gi|343501994|ref|ZP_08739858.1| DNA polymerase II [Vibrio tubiashii ATCC 19109]
 gi|418477611|ref|ZP_13046738.1| DNA polymerase II [Vibrio tubiashii NCIMB 1337 = ATCC 19106]
 gi|342815925|gb|EGU50832.1| DNA polymerase II [Vibrio tubiashii ATCC 19109]
 gi|384574744|gb|EIF05204.1| DNA polymerase II [Vibrio tubiashii NCIMB 1337 = ATCC 19106]
          Length = 785

 Score = 60.8 bits (146), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 53/192 (27%), Positives = 84/192 (43%), Gaps = 25/192 (13%)

Query: 777 AHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIG-KPLELDTDGIW 835
           A K I+NSFYG +   G R++   +A  +T  G +I++  ++LIE+ G + +  DTD  +
Sbjct: 492 AIKIIMNSFYGVLGSSGCRFFDTRLASSITIRGHEIMKQTKVLIEEKGYQVIYGDTDSTF 551

Query: 836 CVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSE 895
             L G F ++         +   I +  V    +   N+  ++Y  L   +   YETH  
Sbjct: 552 VSLNGQFSQS---------QADEIGHQLVDYINEWWTNHLREEY-NLNSILELEYETH-- 599

Query: 896 CSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDG--TLAELKGFEIKRRGELKLIKV 953
                     YK  ++P  + +    KKRYA    +G   L   KG E  R     L + 
Sbjct: 600 ----------YKKFLMPTIRGQETGSKKRYAGLIGEGENELLIFKGLESARTDWTPLAQE 649

Query: 954 FQAELFDKFLHG 965
           FQ  L+    HG
Sbjct: 650 FQQTLYSMVFHG 661


>gi|297527543|ref|YP_003669567.1| DNA polymerase Pol2 [Staphylothermus hellenicus DSM 12710]
 gi|297256459|gb|ADI32668.1| DNA polymerase Pol2 [Staphylothermus hellenicus DSM 12710]
          Length = 801

 Score = 60.8 bits (146), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 100/501 (19%), Positives = 198/501 (39%), Gaps = 105/501 (20%)

Query: 66  IDLYFVSQDGSTFKSK-YKFRPYFYAATKEKMEMDVEAYLRRRY---ESQIADIEILEKE 121
           I ++ +++DG     +  +FRPYFYA  K+ + +D  A   + Y   +S I  +E +EK 
Sbjct: 25  IIIWGITRDGKRILLRDRRFRPYFYAILKDNVSIDDLARKIKTYSDPKSPIIGVEPVEKN 84

Query: 122 DLDLKNHLSGLHKSYLKISFDTVQQLMDVKKDLLHVVERNQAKFDAAEAYESILTGKREQ 181
                              F    + + +   +   V + + K  +              
Sbjct: 85  ------------------YFGKKVRALKITTIIPEYVRKYREKIKS-------------- 112

Query: 182 RPQDFLDCIVDLREYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLLEKRVDLLQRAEVHV 241
                L  ++++ E D+ + IR+ ID+D+R   W                        HV
Sbjct: 113 -----LPEVLEVVEADIRFSIRYIIDHDLRPCGW------------------------HV 143

Query: 242 CAFDIETTKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIE--DLEYTPKPEFE 299
               +E  K P+   DA+Y+I+  I  +   +  L  +   +  DIE  +   TP+P+ +
Sbjct: 144 AEV-VEIPKKPIYRVDAEYEIVGEIKPL---EQTLQPDLRIMAFDIEVYNKSGTPRPQSD 199

Query: 300 GYFKVTNVNNEIELLRL-------------WFAHMQEVKPGIYVTYNGDYFDWPFLETRA 346
               +  +NN  E+ +L             +  +++ + P I V YN D FDWP+L  R+
Sbjct: 200 PVIIIGIMNNNGEIKQLLANKYDDKTSIGEFVNYVKTLDPDIIVGYNTDGFDWPYLIERS 259

Query: 347 AHHGFKMSEELGFQCDKNQGEC-RAKFACHLDCFAWVKRDSY-----LPQ-GSQGLKAVT 399
            + G K+         +  G   R     H+     +  D Y     +P+   + L+ V 
Sbjct: 260 KYVGVKLD------VTRRVGTIPRTSTYGHISVPGRLNTDLYYFAEEIPEVKVKSLENVA 313

Query: 400 KAKLGY----DPLEVNPEDMVRFAKEKP--QMMASYSVSDAVATYYLYMTYVHPFIFSLA 453
           +  LG     + + +   D+ ++  ++    M+  Y++ D  +TY L   ++ PF   L+
Sbjct: 314 EY-LGVMKKSERVIIEYIDIPKYWDDEKLRHMLLQYNIDDVKSTYGLAEKFL-PFAMQLS 371

Query: 454 TIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVICPNKHQSDPEKFYRNHLLESETYIGGH 513
            I  +  D++     G   E  L+ +A+K   + PN+     E +    +L+    +  +
Sbjct: 372 NITGLPLDQIGAASVGFRLEWYLIREAFKYGELVPNRAGRAAESYRGAVVLKPVKGVHEN 431

Query: 514 VECLESGVFRSDLPTSFKLDP 534
           +  L+      ++   + + P
Sbjct: 432 IAVLDFSSMYPNIMIKYNVGP 452



 Score = 46.6 bits (109), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 76/307 (24%), Positives = 124/307 (40%), Gaps = 68/307 (22%)

Query: 770  LYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIG-KPLE 828
            L D  Q A K + N+ YGY+    ARWY  E A  VT  G + I++A  L  K+G K + 
Sbjct: 514  LLDERQKAVKVLANATYGYMGWVHARWYCRECAEAVTAWGRQTIKSAIELARKLGLKVIY 573

Query: 829  LDTDGIWCVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSK 888
             DTD +             F T D                        D+ + L+D +  
Sbjct: 574  GDTDSL-------------FVTYD-----------------------KDRVEKLIDLI-- 595

Query: 889  TYETHSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGEL 948
                 ++   E ++D  YK +    +       KKRYA   +DG + ++ GFE  R    
Sbjct: 596  ----QTKLGFEIKIDKIYKRVFFTEA-------KKRYAGLLEDGRI-DIVGFEAVRGDWA 643

Query: 949  KLIKVFQAELFDKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTM 1008
             + K  Q ++ +  L  +++++    V  V      + D +   I   +LI +     T+
Sbjct: 644  DIAKEVQEKVTEILLKENSVDKAIEYVRKV------IADLKAGKIPLDKLIIW----KTL 693

Query: 1009 SKSLADYGEQKSCAVTTARRLSDFLGDTMVKDKGLRCQYIVACEPQGTPVSERAVPVAIF 1068
            SK + +Y    +  V  A++L        V DK     Y++     G  +S RA P  IF
Sbjct: 694  SKRIEEYSVD-APHVVAAKKLVKAGIKISVNDK---IGYVIL--KGGGKISSRAEPY-IF 746

Query: 1069 ETDAEIM 1075
              D +++
Sbjct: 747  VKDPKLI 753


>gi|392565561|gb|EIW58738.1| delta DNA polymerase [Trametes versicolor FP-101664 SS1]
          Length = 1066

 Score = 60.8 bits (146), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 85/365 (23%), Positives = 133/365 (36%), Gaps = 84/365 (23%)

Query: 64  SCIDLYFVSQDG-STFKSKYKFRPYFYAATKEKM-EMDVEAYLRRRYESQIADIEILEKE 121
           + + ++ V+QDG S       F PYFY AT       DV  ++R  Y +      ++   
Sbjct: 84  TTLRMFGVTQDGHSVLAHITDFLPYFYIATPRGFGNEDVGPFMR--YLNNAVPGGLVRDM 141

Query: 122 DLDLKNHLSGLHK----SYLKISFD---TVQQLMDVKKDLLHVVERNQAKFDAAEAYESI 174
           +L  K  L G       S++KI+     ++ ++ D   D   ++ER + +F+        
Sbjct: 142 ELTKKRSLWGYKGDDWVSFIKITVADQRSLPKVRDKSSDSPRLLERGECRFN-------- 193

Query: 175 LTGKREQRPQDFLDCIVDLREYDVPYHIRFAIDNDVRCGQWYDVSISSTGPL-------- 226
                     D  +  V   E ++ Y +RF ID  V    W +V       L        
Sbjct: 194 ----------DLFNGEVATFESNIAYTLRFMIDTRVVGMNWIEVPAGQYIILEGKDKRSH 243

Query: 227 --LEKRV------------DLLQRAEVHVCAFDIETTKLPLKFPDADYDIIMMISYMLDG 272
             LE  V               + A + + +FDIE       FP+A  D ++ I+ M+  
Sbjct: 244 CQLELSVKWNKFISHAPDGQWSKTAPLRILSFDIECAGRKGIFPEAQVDPVIQIANMVTR 303

Query: 273 QGYLIINRECVGEDIEDLEYTPKPEFEGYF-----------KVTNVNNEIELLRLWFAHM 321
           QG                    KP     F           +V +  NE ELL  W   +
Sbjct: 304 QG------------------ESKPFIRNVFTLNTCAHIVGSQVISFQNEAELLLKWREFV 345

Query: 322 QEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDKNQGECRAKFACHLDCFAW 381
           +EV P + + YN   FD P+L  RA     +    LG   +K           H    A+
Sbjct: 346 EEVDPDVVIGYNISGFDLPYLIDRAKALKAQKFPYLGRMTNKQT----VTKDTHFSSKAF 401

Query: 382 VKRDS 386
            +RDS
Sbjct: 402 GQRDS 406


>gi|388545719|ref|ZP_10148999.1| DNA polymerase II [Pseudomonas sp. M47T1]
 gi|388276130|gb|EIK95712.1| DNA polymerase II [Pseudomonas sp. M47T1]
          Length = 787

 Score = 60.8 bits (146), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 63/230 (27%), Positives = 97/230 (42%), Gaps = 45/230 (19%)

Query: 741 LNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHKCILNSFYGYVMRKGARWYSME 800
           +N VW+G+   AKA  N                L  A K I+N+FYG +   G R++   
Sbjct: 472 VNTVWQGR-EAAKAHHNQ--------------PLSQALKIIMNAFYGVLGSSGCRFFDPR 516

Query: 801 MAGVVTYTGAKIIQNARLLIEKIG-KPLELDTDGIWCVLPGSFPENFTFKTKDLKKKLTI 859
           +A  +T  G +I+Q  R L+E  G + +  DTD  +  L  +  +    +  D+ + L  
Sbjct: 517 LASSITLRGHEIMQRTRQLVEGQGYEVIYGDTDSTFVWLKRAHGQQ---EAADIGRALVA 573

Query: 860 SYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEFEVDGPYKAMILPA--SKEE 917
                       R +  DQ           Y  HS   ++FE    +   ++P     EE
Sbjct: 574 HVNAFW------RQHLQDQ-----------YGLHSALELQFETH--FTRFLMPTIRGAEE 614

Query: 918 GILIKKRYA--VFNDDGTLAEL-KGFEIKRRGELKLIKVFQAELFDKFLH 964
           G   KKRYA  V   DG+   + KG E+ R     L + FQ EL+++  H
Sbjct: 615 G--SKKRYAGLVRRADGSDEMVYKGLEVVRTDWSPLARAFQQELYERIFH 662


>gi|195327921|ref|XP_002030665.1| GM24454 [Drosophila sechellia]
 gi|194119608|gb|EDW41651.1| GM24454 [Drosophila sechellia]
          Length = 573

 Score = 60.5 bits (145), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 60/200 (30%), Positives = 89/200 (44%), Gaps = 36/200 (18%)

Query: 185 DFLDCIVDLREYDVPYHIRFAIDNDVRCGQWYDVSI-------SSTGPLLEKR----VDL 233
           DF DC     E ++ + IRF +D DV    W ++ I       S + PL E R    VD+
Sbjct: 217 DFQDCRA--FENNIDFDIRFMVDTDVVGCNWIELPIGHWRIRNSHSKPLPESRCQIEVDV 274

Query: 234 L--------------QRAEVHVCAFDIETTKLPLKFPDADYDIIMMISYMLDGQGYLIIN 279
                          + A   + +FDIE       FP+A  D ++ I+ M+  QG     
Sbjct: 275 AFDRFISHEPEGEWSKVAPFRILSFDIECAGRKGIFPEAKMDPVIQIANMVIRQG----E 330

Query: 280 RECVGEDIEDL-EYTPKPEFEGYFKVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFD 338
           RE    ++  L E  P     G  ++   + E ++L  W A ++EV P I   YN + FD
Sbjct: 331 REPFIRNVFTLNECAP---IIGS-QLLCHDKETQMLDKWSAFVREVDPDILTGYNINNFD 386

Query: 339 WPFLETRAAHHGFKMSEELG 358
           +P+L  RAAH   +  E LG
Sbjct: 387 FPYLINRAAHLKVRNFEYLG 406


>gi|339486900|ref|YP_004701428.1| DNA polymerase II [Pseudomonas putida S16]
 gi|338837743|gb|AEJ12548.1| DNA polymerase II [Pseudomonas putida S16]
          Length = 786

 Score = 60.5 bits (145), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 86/346 (24%), Positives = 141/346 (40%), Gaps = 63/346 (18%)

Query: 715  GICMRENSFYVDTVRSFRDRRYEY---KGLNKVWKGKLSEAKASGNSIKIQEAQDMVVLY 771
            G+ + ++   V+  R  R  R E+     + +VW+G+   AK  GN+             
Sbjct: 442  GLRLPDDEHSVEGFRGGRFSRSEHCLPAIVERVWQGR-EAAKREGNA------------- 487

Query: 772  DSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIG-KPLELD 830
              L  A K I+N+FYG +   G R++   +A  +T  G +I++  R LIE  G + +  D
Sbjct: 488  -PLSQALKIIMNAFYGVLGSSGCRFFDPRLASSITMRGHQIMRQTRALIEARGYEVIYGD 546

Query: 831  TDGIWCVLPGSFPENFTFKT-KDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKT 889
            TD  +  L G+  E    +  ++L  ++ + + C  L     R   N             
Sbjct: 547  TDSTFVWLKGAHGEEAAARIGRELVAEVNLWW-CKHL-----REQMN------------- 587

Query: 890  YETHSECSIEFEVDGPYKAMILPASKEEGILIKKRYA--VFNDDGTLAEL-KGFEIKRRG 946
                S   ++FEV   Y+  ++P  +      KKRYA  V   DG+   + KG E  R  
Sbjct: 588  --LESALELQFEVH--YRRFLMPTIRGTDEGSKKRYAGLVQRADGSEQMVYKGLESVRTD 643

Query: 947  ELKLIKVFQAELFDKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESS 1006
               L + FQ EL+ +   G    E Y A          + D   + +A  EL + +    
Sbjct: 644  WSPLAREFQQELYGRIFRG----EPYQAY---------VRDYVRRTLA-GELNELMVYRK 689

Query: 1007 TMSKSLADYGEQKSCAVTTARRLSDF---LGDTMVKDKGLRCQYIV 1049
             + + LADY       V  AR   D+   LG  +   +G    Y++
Sbjct: 690  RLRRPLADYQRNVPPHVRAARLADDYNRRLGRPLQYQRGGWISYLI 735


>gi|123468819|ref|XP_001317625.1| hypothetical protein [Trichomonas vaginalis G3]
 gi|121900364|gb|EAY05402.1| hypothetical protein TVAG_197030 [Trichomonas vaginalis G3]
          Length = 450

 Score = 60.5 bits (145), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 36/185 (19%), Positives = 86/185 (46%), Gaps = 19/185 (10%)

Query: 1535 DETTSSAPAFRVVKQLIQRCLTDAVTSGNVFADAILQHLYRWLCSPHSKLHDPVLHRILH 1594
            D    +   F ++   + + +       ++ ++ I Q +  WLC+ +S  +DP +H +  
Sbjct: 46   DAVVVTQNVFLLLSDFLGKLIKKCGDERSILSEMIAQ-VGTWLCNSNSVFYDPAIHSVYC 104

Query: 1595 KVMQKVFAMLLAEFRKLGATIIFANFSKVIIDTGKFDLSAAKAYCDSLLKALQTRELFEW 1654
              +  VF  ++++F +    +I+A+ S++I++ G F L++A       + A+   +L   
Sbjct: 105  LFLNNVFNEMVSKFEEQHIPVIYADQSRIIVNNGDFPLASA-------INAVNQNQLTNR 157

Query: 1655 IELEPVHFWHSLLFMDQYNYGGIPARADESLDDDSQVDIVSSWNIAEYLPKEIQDHFVLV 1714
            ++   +  +  L+++D YNY  I           +  +I   WNIA ++    ++     
Sbjct: 158  VDFLEISSFDKLVWIDNYNYHCI-----------ANGEISYEWNIANFIGVSFREQLQRY 206

Query: 1715 VSEFM 1719
             ++F+
Sbjct: 207  FTKFL 211



 Score = 57.8 bits (138), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 42/163 (25%), Positives = 77/163 (47%), Gaps = 20/163 (12%)

Query: 1832 VLVMRKNLLKYVRVREFAPEAEFRDPCPSFILPNVICSYCNDCRDLDLCRDMALLAQDWH 1891
            +L  ++N+L  + V +  P A+F DP     + +V+C +C    ++D+ RD   L  ++ 
Sbjct: 295  ILGTKRNVLMLLGVSDHDPRAKFVDPSLHLYILSVLCKHCLHTTNIDILRDQNCLQGNFL 354

Query: 1892 CAMPQCGQPYDREVMENALLQIVRQRERLYHLQDLVCIRCNQVKAAHLAEQCACAGSFRC 1951
            C  P C   YD EV+E  L +   ++   + +QDL C +       H+A +        C
Sbjct: 355  C--PICKAVYDTEVIERWLFEESCRKIEQFQMQDLACPK------GHVAHR---KMPMSC 403

Query: 1952 KEDASDF-----RSKMQIFLNI----ANRQGFQLLQECTSWIL 1985
            K+D  +      + ++  +L+     AN  G   L++  S+IL
Sbjct: 404  KDDGGNLGNTVNKDEINEYLHTVEVAANEVGLGSLRDTISYIL 446


>gi|348666766|gb|EGZ06593.1| hypothetical protein PHYSODRAFT_532354 [Phytophthora sojae]
          Length = 1050

 Score = 60.5 bits (145), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 82/344 (23%), Positives = 135/344 (39%), Gaps = 56/344 (16%)

Query: 195 EYDVPYHIRFAIDNDVRCGQWYDV-----SISSTG---PLLEKRVDLL------------ 234
           E +VP+ +RF ID  +R   W +      S+ ST     L +  +D+             
Sbjct: 186 ESNVPFILRFMIDEGIRGCNWVEAPKGAYSVRSTAQKKSLCQLEIDITYDNLVSHAPEGQ 245

Query: 235 --QRAEVHVCAFDIETTKLPLKFPDADYDIIMMISYMLDGQG-YLIINRECVGEDIEDLE 291
             + A + + +FDIE       FP+A+ D ++ I+ ++  QG +  I R     D     
Sbjct: 246 WGKVAPLRILSFDIECMGRKGHFPEAEQDPVIQIANVVQEQGSHTPIIRNVFVLD----- 300

Query: 292 YTPKPEFEGYFKVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGF 351
            T KP    +  V     E E+L  W   +QEV P I   YN   FD P+L  R      
Sbjct: 301 -TCKPIVGAH--VMEFEKEGEMLEKWARFVQEVDPDIITGYNIANFDIPYLLNRGKALKL 357

Query: 352 KMSEELGFQCDKNQGECRAKFA-----------------CHLDCFAWVKRDSYLPQGSQG 394
           +    LG   +K     +  F+                 C  D    ++R   L   S  
Sbjct: 358 QNYNLLGRLANKAAFMEKKTFSSAQYGKSENVKTTIHGRCMFDLLPIMRRSQQL--SSYS 415

Query: 395 LKAVTKAKLGYDPLEVNP---EDMVRFAKEKPQMMASYSVSDAVATYYLY--MTYVHPFI 449
           L AV+ A LG    +V      D+ R   +    +A Y + DA     L   ++Y+  FI
Sbjct: 416 LNAVSAAFLGQQKEDVPHGIISDLQRGTDDDRHRLAVYCLKDAYLPLRLLDKLSYLVNFI 475

Query: 450 FSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVICPNKHQS 493
             +A +  +  D ++ +G       +L+ +   A+++ P   +S
Sbjct: 476 -EMARVSGVPIDFLIERGQQIKVFSMLLRKCKDASLVVPTLPRS 518


>gi|352681402|ref|YP_004891926.1| polB DNA-directed DNA polymerase I (B1) [Thermoproteus tenax Kra 1]
 gi|350274201|emb|CCC80846.1| polB DNA-directed DNA polymerase I (B1) [Thermoproteus tenax Kra 1]
          Length = 860

 Score = 60.5 bits (145), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 72/311 (23%), Positives = 132/311 (42%), Gaps = 30/311 (9%)

Query: 225 PLLEKRVDLLQRAEVHVCAFDIETTKLPLKFPDADYDIIMMISYMLDG-QGYLIINRECV 283
           PL +  +  ++R  + +  F  +  K+P    DA Y+++ +     DG +  L++ R  V
Sbjct: 206 PLFQAPIPHIKRVAIDIEVFTPQENKVP-NPKDALYEVVSVALVGTDGLRRVLLLKRPDV 264

Query: 284 GEDIEDLEYTPKPEFEGYFKVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLE 343
             D + L+       +  ++V   +NE +L+   F  +  V+  + V++NGD FD P+L 
Sbjct: 265 KVDFDALK-------DAEYEVLFFDNEYDLIAEVFKTL--VQYPLIVSFNGDNFDLPYLY 315

Query: 344 TRAAHHGFKMSEELGFQCDKNQGECRAKFACHLDC---FAWVKRDSY----LPQGSQGLK 396
            RA   GFK  EE+     ++          H+D    FA    + Y    + +G +GL 
Sbjct: 316 NRALALGFK-KEEIPIVARRDY--VTVAPGIHIDLYKFFAIKAIEVYAFGGVYRGERGLD 372

Query: 397 AVTKAKLGYDPLEVNPEDMVRFAKEKPQMMASYSVSDAVATYYLYM---TYVHPFIFSLA 453
           A+  A LG   +E         +      +A Y+  DA  T Y  +     V   +  L+
Sbjct: 373 AIASAVLGIGKIERQSV----ISSLPLDELAEYNFRDAFITLYFTVYNDELVMKLVILLS 428

Query: 454 TIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVICPNKHQ--SDPEKFYRNHLLESETYIG 511
            I  + P+++ R         +L  +  +   + PNK    +   + Y   +++ + Y G
Sbjct: 429 RIAKLPPEDLTRSQVSAWIRNMLYFEHRRRGWLIPNKEDIIASRGEAYTKAIIKGKKYAG 488

Query: 512 GHVECLESGVF 522
             V    +GVF
Sbjct: 489 AVVLDPPAGVF 499


>gi|260779035|ref|ZP_05887927.1| DNA polymerase II [Vibrio coralliilyticus ATCC BAA-450]
 gi|260605199|gb|EEX31494.1| DNA polymerase II [Vibrio coralliilyticus ATCC BAA-450]
          Length = 787

 Score = 60.5 bits (145), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 49/198 (24%), Positives = 85/198 (42%), Gaps = 37/198 (18%)

Query: 777 AHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIG-KPLELDTDGIW 835
           A K I+NSFYG +   G R++   +A  +T  G +I++  ++LIE+ G + +  DTD  +
Sbjct: 494 AIKIIMNSFYGVLGSSGCRFFDTRLASSITMRGHEIMKQTKVLIEEQGYQVIYGDTDSTF 553

Query: 836 CVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSE 895
             L G F                            ++   ++    LV+ ++  + TH +
Sbjct: 554 VSLNGQF----------------------------SQEQADEIGHQLVEHINSWWTTHLK 585

Query: 896 ------CSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAEL--KGFEIKRRGE 947
                   +E E +  YK  ++P  + +    KKRYA    +G   ++  KG E  R   
Sbjct: 586 QEYGLTSILELEYETHYKKFLMPTIRGQETGSKKRYAGLIGEGDREKIVFKGLESARTDW 645

Query: 948 LKLIKVFQAELFDKFLHG 965
             L + FQ +L+    HG
Sbjct: 646 TPLAQRFQQDLYSLVFHG 663


>gi|410611735|ref|ZP_11322828.1| DNA polymerase II [Glaciecola psychrophila 170]
 gi|410168774|dbj|GAC36717.1| DNA polymerase II [Glaciecola psychrophila 170]
          Length = 783

 Score = 60.5 bits (145), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 49/197 (24%), Positives = 82/197 (41%), Gaps = 25/197 (12%)

Query: 777 AHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIG-KPLELDTDGIW 835
           A K ++NSFYG +   G  +Y   +A  +T  G  I+Q     IE+ G + +  DTD  +
Sbjct: 490 AIKILMNSFYGVLGSGGCPFYDTRLASSITMRGHDIMQTTAKWIEEAGYQVIYGDTDSTF 549

Query: 836 CVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSE 895
             L G + E    + K + + L +              N N ++Q  +  + +      +
Sbjct: 550 VWLDGEYTEQ---QAKQIGQSLAL--------------NINQKWQHNIQQIHQL-----D 587

Query: 896 CSIEFEVDGPYKAMILPASKEEGILIKKRYAVF--NDDGTLAELKGFEIKRRGELKLIKV 953
           C +E E +  +   ++P  +   +  KKRYA      DG     KG E  R    +L K 
Sbjct: 588 CDLEIEFETHFSQFLMPTIRGSELGSKKRYAGLKTTKDGDELVFKGLETVRSDWTQLAKG 647

Query: 954 FQAELFDKFLHGSTIEE 970
           FQ  L+     G  + +
Sbjct: 648 FQLTLYKMVFAGQNVHD 664


>gi|308185636|ref|YP_003929767.1| DNA polymerase II [Pantoea vagans C9-1]
 gi|308056146|gb|ADO08318.1| DNA polymerase II [Pantoea vagans C9-1]
          Length = 784

 Score = 60.1 bits (144), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 85/355 (23%), Positives = 133/355 (37%), Gaps = 68/355 (19%)

Query: 725  VDTVRSFRDRRYEYKG------LNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAH 778
             D+V  FR+ R+          + ++W G+         + K Q+ Q        L  A 
Sbjct: 448  ADSVEGFREARFSRHTHCLPAIVEQIWLGR--------EAAKKQKNQ-------PLSQAL 492

Query: 779  KCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIG-KPLELDTDGIWCV 837
            K I+N+FYG +     R++   +A  +T  G  I+Q  R LIE  G   +  DTD  +  
Sbjct: 493  KIIMNAFYGVLGTSACRFFDPRLASSITLRGHAIMQQTRTLIEAEGYDVIYGDTDSTFVW 552

Query: 838  LPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECS 897
            L  +  E         +   TI    V    D  R++   Q Q L   +   YE+H    
Sbjct: 553  LKSAHSE---------EDAATIGQQLVQKVNDWWRDHLQ-QTQGLTSALELEYESH---- 598

Query: 898  IEFEVDGPYKAMILPASKEEGILIKKRYAVFNDD--GTLAELKGFEIKRRGELKLIKVFQ 955
                    +   ++P  +      KKRYA    D  G     KG E  R     L K FQ
Sbjct: 599  --------FCRFLMPTIRGAEQGSKKRYAGLIRDAAGERMVFKGLESVRTDWTPLAKQFQ 650

Query: 956  AELFDKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLADY 1015
             +L+ +  H                 W D +      +   EL D +     + + L +Y
Sbjct: 651  QQLYHRIFHREP--------------WQDYIRTTVAQLLAGELDDQLIYKKRLRRPLNEY 696

Query: 1016 GEQKSCAVTTARRLSD----FLGDTMVKDKGLRCQYIVACE-PQGTPVSERAVPV 1065
             E+       A RL+D     L   +   KG R +Y++A   P+  P+  R+ P+
Sbjct: 697  -ERNVPPHVRAARLADEQNRKLNRPLQYQKGGRIRYVMATAGPE--PLEARSTPL 748


>gi|431801899|ref|YP_007228802.1| DNA polymerase II [Pseudomonas putida HB3267]
 gi|430792664|gb|AGA72859.1| DNA polymerase II [Pseudomonas putida HB3267]
          Length = 786

 Score = 60.1 bits (144), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 82/345 (23%), Positives = 136/345 (39%), Gaps = 61/345 (17%)

Query: 715  GICMRENSFYVDTVRSFRDRRYEY---KGLNKVWKGKLSEAKASGNSIKIQEAQDMVVLY 771
            G+ + ++   V+  R  R  R E+     + +VW+G+   AK  GN+             
Sbjct: 442  GLRLPDDEHSVEGFRGGRFSRSEHCLPAIVERVWQGR-EAAKREGNA------------- 487

Query: 772  DSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIG-KPLELD 830
              L  A K I+N+FYG +   G R++   +A  +T  G +I++  R LIE  G + +  D
Sbjct: 488  -PLSQALKIIMNAFYGVLGSSGCRFFDPRLASSITMRGHQIMRQTRALIEARGYEVIYGD 546

Query: 831  TDGIWCVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTY 890
            TD  +  L G+  E    +                    + R    +  Q   + + +  
Sbjct: 547  TDSTFVWLKGAHGEETAAR--------------------IGRELVAEVNQWWREHLREQM 586

Query: 891  ETHSECSIEFEVDGPYKAMILPASKEEGILIKKRYA--VFNDDGTLAEL-KGFEIKRRGE 947
               S   ++FEV   Y+  ++P  +      KKRYA  V   DG+   + KG E  R   
Sbjct: 587  SLDSALELQFEVH--YRRFLMPTIRGTDEGSKKRYAGLVQRADGSEQMVYKGLESVRTDW 644

Query: 948  LKLIKVFQAELFDKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESST 1007
              L + FQ EL+ +   G    E Y A          + D   + +A  EL + +     
Sbjct: 645  SPLAREFQQELYGRIFRG----EPYQAY---------VRDYVRRTLA-GELNELMVYRKR 690

Query: 1008 MSKSLADYGEQKSCAVTTARRLSDF---LGDTMVKDKGLRCQYIV 1049
            + + L DY       V  AR   D+   LG  +   +G    Y++
Sbjct: 691  LRRPLVDYQRNVPPHVRAARLADDYNRRLGRPLQYQRGGWISYLI 735


>gi|343495728|ref|ZP_08733845.1| DNA polymerase II [Vibrio nigripulchritudo ATCC 27043]
 gi|342822307|gb|EGU57047.1| DNA polymerase II [Vibrio nigripulchritudo ATCC 27043]
          Length = 787

 Score = 60.1 bits (144), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 52/202 (25%), Positives = 83/202 (41%), Gaps = 35/202 (17%)

Query: 777 AHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWC 836
           A K I+NSFYG +   G R++   +A  +T  G +I++  R LIE  G          + 
Sbjct: 494 AIKIIMNSFYGVLGSSGCRFFDTRLASSITMRGHEIMKQTRTLIEDKG----------YQ 543

Query: 837 VLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETH--- 893
           V+ G     F                 V LN   ++ + +     LV+ +++ ++TH   
Sbjct: 544 VIYGDTDSTF-----------------VALNQPHSQEDADKIGHALVEHINQWWQTHLTE 586

Query: 894 ---SECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAEL--KGFEIKRRGEL 948
                  +E E +  YK  ++P  +      KKRYA    DG   ++  KG E  R    
Sbjct: 587 EFGITSHLELEYETHYKKFLMPTIRGSEAGSKKRYAGLIGDGDNEQIIFKGLESARTDWT 646

Query: 949 KLIKVFQAELFDKFLHGSTIEE 970
            L + FQ  L+D   H    E+
Sbjct: 647 PLSQEFQQTLYDMVFHNQDPEQ 668



 Score = 40.8 bits (94), Expect = 7.3,   Method: Compositional matrix adjust.
 Identities = 65/252 (25%), Positives = 101/252 (40%), Gaps = 35/252 (13%)

Query: 307 VNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQ------ 360
           V NE  LL+  F   Q   P I V ++   FD+  L  R   H   +    G Q      
Sbjct: 199 VENEYALLKAMFDWFQMFDPDIVVGWSVIDFDFRLLHRRCEWHKLPLKIGRGGQNAHFRQ 258

Query: 361 -CDKNQGECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMV--- 416
             + NQ          LD    +K  +Y  + S  L++V++  LG      N  D +   
Sbjct: 259 SNNSNQSFITIPGRVVLDGIDTLKTATYHFR-SWSLESVSQELLGEGKDIHNVHDRMDEI 317

Query: 417 --RFAKEKPQMMASYSVSDAVATYYLY-MTYVHPFIFSLATIIPMSPDEVLRKGSGTLCE 473
              FA++KP  +A Y++ D V    ++  T++  F    + +  +  D +   GS     
Sbjct: 318 NRMFAEDKP-ALAKYNLQDCVLVNRIFEHTHLLEFAIERSKLTGVELDRL--GGSVAAFT 374

Query: 474 MLLMVQAYKANVICPNKHQSDPEKFYRNHLLESETYI---GGHVECLESGVFRSDLPTSF 530
            L + Q ++AN I PN              L+SE ++   GG+V     G++ S L   F
Sbjct: 375 NLYLPQLHRANYIAPN--------------LQSENWLASPGGYVMDSIPGLYNSVLVLDF 420

Query: 531 K-LDPSAYEQLL 541
           K L PS     L
Sbjct: 421 KSLYPSIIRSFL 432


>gi|392589878|gb|EIW79208.1| hypothetical protein CONPUDRAFT_138364 [Coniophora puteana
           RWD-64-598 SS2]
          Length = 1096

 Score = 60.1 bits (144), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 57/214 (26%), Positives = 89/214 (41%), Gaps = 33/214 (15%)

Query: 195 EYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLLEK------RVDLLQR------------ 236
           E +V Y +RF ID  V    W ++       + +K      +++L  R            
Sbjct: 234 ESNVAYVLRFMIDTKVVGMNWIEIPAGKYKLVPQKDKKSTCQLELTTRHDSFISHPPDGK 293

Query: 237 ----AEVHVCAFDIETTKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEY 292
               A + V +FDIE       FP+A  D ++ I+ M+  QG      +    +I  L  
Sbjct: 294 WQTIAPLRVLSFDIECAGRKGIFPEAQVDPVIQIANMVTIQG----ESQPFIRNIFTLNT 349

Query: 293 TPKPEFEGYFKVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFK 352
                  G  +V + N+E E+L  W   + EV P + + YN   FD+P+L  RA H G K
Sbjct: 350 CS--HIVGS-QVMSFNDEAEMLNAWSQFIAEVDPDVIIGYNISNFDFPYLFDRAKHLGAK 406

Query: 353 MSEELGFQCDKNQGECRAKFACHLDCFAWVKRDS 386
              + G    + +G   A    H    A+ +RDS
Sbjct: 407 QFPQFG----RMKGWAAAIKDTHFSSKAFGQRDS 436


>gi|323493300|ref|ZP_08098424.1| DNA polymerase II [Vibrio brasiliensis LMG 20546]
 gi|323312463|gb|EGA65603.1| DNA polymerase II [Vibrio brasiliensis LMG 20546]
          Length = 787

 Score = 60.1 bits (144), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 53/203 (26%), Positives = 82/203 (40%), Gaps = 37/203 (18%)

Query: 777 AHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIG-KPLELDTDGIW 835
           A K I+NSFYG +   G R++   +A  +T  G +I++  + LIE  G + +  DTD  +
Sbjct: 494 AIKIIMNSFYGVLGSSGCRFFDTRLASSITMRGHEIMKQTKKLIEDKGYQVIYGDTDSTF 553

Query: 836 CVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETH-- 893
             L G+F +                        D   N        LVD +++ + TH  
Sbjct: 554 VSLNGAFNQQ---------------------QADQIGNQ-------LVDYINQWWTTHLA 585

Query: 894 ----SECSIEFEVDGPYKAMILPASKEEGILIKKRYA--VFNDDGTLAELKGFEIKRRGE 947
                +  +E E +  YK  ++P  + +    KKRYA  +   D      KG E  R   
Sbjct: 586 EEYQLDSMLELEYETHYKKFLMPTIRGQETGSKKRYAGLIGEGDNERIVFKGLESARTDW 645

Query: 948 LKLIKVFQAELFDKFLHGSTIEE 970
             L + FQ  L+    HG    E
Sbjct: 646 TPLAQEFQQTLYSMVFHGENPSE 668


>gi|148982310|ref|ZP_01816708.1| DNA polymerase II [Vibrionales bacterium SWAT-3]
 gi|145960544|gb|EDK25903.1| DNA polymerase II [Vibrionales bacterium SWAT-3]
          Length = 675

 Score = 60.1 bits (144), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 52/191 (27%), Positives = 82/191 (42%), Gaps = 25/191 (13%)

Query: 777 AHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIG-KPLELDTDGIW 835
           A K I+NSFYG +   G R++   +A  +T  G +I++  ++LIE  G + +  DTD  +
Sbjct: 494 AIKIIMNSFYGVLGSSGCRFFDTRLASSITMRGHEIMKQTKVLIEDKGYQVIYGDTDSTF 553

Query: 836 CVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSE 895
             L GS+         D ++   I    V    D   N+  + Y  L   +   YETH  
Sbjct: 554 VSLNGSY---------DQQQADEIGNELVAYINDWWTNHLKETY-NLTSILELEYETH-- 601

Query: 896 CSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAEL--KGFEIKRRGELKLIKV 953
                     Y+  ++P  +      KKRYA   + G   ++  KG E  R     L + 
Sbjct: 602 ----------YRKFLMPTIRGSETGSKKRYAGLINQGDQEKIIFKGLESARTDWTPLAQQ 651

Query: 954 FQAELFDKFLH 964
           FQ  L++   H
Sbjct: 652 FQQTLYEMVFH 662


>gi|374325878|ref|YP_005084078.1| DNA polymerase II [Pyrobaculum sp. 1860]
 gi|356641147|gb|AET31826.1| DNA polymerase II [Pyrobaculum sp. 1860]
          Length = 785

 Score = 60.1 bits (144), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 77/380 (20%), Positives = 145/380 (38%), Gaps = 70/380 (18%)

Query: 187 LDCIVDLREYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLLEKRVDLLQRAE-------- 238
           L  +  + E D+ +++R+ +D  V    W    +   G  L  R+ + + AE        
Sbjct: 104 LPGVSGVYEADIRFYMRYLVDMGVVPCSWNVADVEDAGERL-GRLPVYRVAEWRGVVGGF 162

Query: 239 ---VHVCAFDIET-----TKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDL 290
              + V AFD+E      T  PL+ P     ++M+     DG+             +E  
Sbjct: 163 PPPLRVLAFDVEVYNERGTPDPLRDP-----VVMLAVQTSDGR-------------VEVF 204

Query: 291 EYTPKPEFEGYFKVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHG 350
           E + +             ++  +LR +   ++E  P + V YN + FDWP+L  RA   G
Sbjct: 205 EASGR-------------DDRGVLRSFVDALREFDPDVVVGYNSNKFDWPYLSERAKALG 251

Query: 351 FKMSEELGFQCDKNQGECRAKFACHLDCFAWVKRDSY-----LPQGSQGLKAVTKAKLGY 405
             +      + D+  G  +     H         D +      P+    LK + +    +
Sbjct: 252 VPL------RVDRVGGAPQQSVYGHWSVVGRANVDLFNIVEEFPEIK--LKTLDRVAEYF 303

Query: 406 DPLEVNPEDMVRFAK--------EKPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIP 457
             +  +   ++   K         K  ++  Y V D  +TY L    + PF+  L+++  
Sbjct: 304 GVMRRDERVLIPGHKIYEYWRDESKRPLLRQYVVDDVKSTYGL-AERLLPFLIQLSSVSG 362

Query: 458 MSPDEVLRKGSGTLCEMLLMVQAYKANVICPNKHQSDPEKFYRNHLLESETYIGGHVECL 517
           +  D+V     G   E +L+  AYK   + PN+ + + E +    +LE +  +   V  L
Sbjct: 363 LPLDQVAAASVGNRVEWMLLRYAYKMGEVAPNREEREYEPYKGAIVLEPKPGLYNDVLVL 422

Query: 518 ESGVFRSDLPTSFKLDPSAY 537
           +      ++   + L P  Y
Sbjct: 423 DFSSMYPNVMMRYNLSPDTY 442


>gi|261210631|ref|ZP_05924923.1| DNA polymerase II [Vibrio sp. RC341]
 gi|260840116|gb|EEX66696.1| DNA polymerase II [Vibrio sp. RC341]
          Length = 787

 Score = 60.1 bits (144), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 52/196 (26%), Positives = 82/196 (41%), Gaps = 25/196 (12%)

Query: 777 AHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIG-KPLELDTDGIW 835
           A K I+NSFYG +   G R++   +A  +T  G +I+   + LIE  G + +  DTD  +
Sbjct: 494 AIKIIMNSFYGVLGSSGCRFFDARLASSITMRGHEIMIQTKQLIEARGYQVIYGDTDSTF 553

Query: 836 CVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSE 895
             L G F +      +D  K              +     ++  Q   D + + Y   S 
Sbjct: 554 VALGGPFSQ------QDADK--------------IGHTLVSEINQWWTDHLQQEYALTSI 593

Query: 896 CSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAEL--KGFEIKRRGELKLIKV 953
             +E+E    Y+  ++P  +      KKRYA    +G   +L  KG E  R     L + 
Sbjct: 594 LELEYETH--YRRFLMPTIRGSETGSKKRYAGLKGEGDNEQLIFKGLESARTDWTPLAQR 651

Query: 954 FQAELFDKFLHGSTIE 969
           FQ +L+    HG   E
Sbjct: 652 FQHQLYQLIFHGQDPE 667


>gi|18313103|ref|NP_559770.1| DNA polymerase II [Pyrobaculum aerophilum str. IM2]
 gi|18160611|gb|AAL63952.1| DNA-directed DNA polymerase (B3) [Pyrobaculum aerophilum str. IM2]
          Length = 785

 Score = 59.7 bits (143), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 79/380 (20%), Positives = 145/380 (38%), Gaps = 70/380 (18%)

Query: 187 LDCIVDLREYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLLEKRVDLLQRAE-------- 238
           L  +  + E D+ +++R+ +D  V    W  V   +TG  L   + + + AE        
Sbjct: 104 LPGVSGVYEADIRFYMRYMLDMGVVPCSWNTVDAEATGEKL-GNLPVYKVAEWGGVTEGF 162

Query: 239 ---VHVCAFDIET-----TKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDL 290
              + V AFDIE      T  PL+ P     +I++     DG+             +E  
Sbjct: 163 PPPLRVLAFDIEVYNERGTPDPLRDP-----VILLAVQASDGR-------------VEVF 204

Query: 291 EYTPKPEFEGYFKVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHG 350
           E + +             ++  +LR +   ++E  P + V YN + FDWP+L  RA   G
Sbjct: 205 EASGR-------------DDRSVLRSFIDFVREFDPDVIVGYNSNQFDWPYLAERARALG 251

Query: 351 FKMSEELGFQCDKNQGECRAKFACHLDCFAWVKRDSY-----LPQGSQGLKAVTKAKLGY 405
             +      + D+  G  +     H         D Y      P+    LK + +    +
Sbjct: 252 IPL------KVDRVGGAPQQSVYGHWSVTGRANVDLYNIVDEFPEIK--LKTLDRVAEYF 303

Query: 406 DPLEVNPEDMVRFAK--------EKPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIP 457
             ++     +V   K         K  ++  Y + D  +TY L    + PF+  L+++  
Sbjct: 304 GVMKREERVLVPGHKIYEYWRDQGKRPLLRQYVIDDVKSTYGL-AEKLLPFLIQLSSVSG 362

Query: 458 MSPDEVLRKGSGTLCEMLLMVQAYKANVICPNKHQSDPEKFYRNHLLESETYIGGHVECL 517
           +  D+V     G   E +L+  AY+   + PN+ + + E +    +LE    +   V  L
Sbjct: 363 LPLDQVAAASVGNRVEWMLLRYAYRLGEVAPNREEREYEPYKGAIVLEPRPGLYSDVLAL 422

Query: 518 ESGVFRSDLPTSFKLDPSAY 537
           +      ++   + L P  Y
Sbjct: 423 DFSSMYPNIMMKYNLSPDTY 442


>gi|378578114|ref|ZP_09826794.1| DNA polymerase II [Pantoea stewartii subsp. stewartii DC283]
 gi|377819223|gb|EHU02303.1| DNA polymerase II [Pantoea stewartii subsp. stewartii DC283]
          Length = 786

 Score = 59.7 bits (143), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 86/356 (24%), Positives = 131/356 (36%), Gaps = 70/356 (19%)

Query: 725  VDTVRSFRDRRYEYKG------LNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAH 778
             D+V  FR+ R+  +       + ++W+G+   AK  GN                L  A 
Sbjct: 450  ADSVPGFREARFSRETHCLPAIVEQIWQGR-ETAKKQGNK--------------PLSQAL 494

Query: 779  KCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIG-KPLELDTDGIWCV 837
            K I+N+FYG +     R++   +A  +T  G  I+Q  R LIE  G   +  DTD  +  
Sbjct: 495  KIIMNAFYGVLGTSACRFFDPRLASSITLRGHAIMQQTRELIEAEGYDVIYGDTDSTFVW 554

Query: 838  LPGSFPENFTFKT-KDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSEC 896
            L  +  E     T + L  K+           D  R +   QY  L   +   YE H   
Sbjct: 555  LKSARDEAEAEATGRALAAKVN----------DWWREHLQQQY-GLTSALELEYENH--- 600

Query: 897  SIEFEVDGPYKAMILPASKEEGILIKKRYA--VFNDDGTLAELKGFEIKRRGELKLIKVF 954
                     +   ++P  +      KKRYA  +   D      KG E  R     L + F
Sbjct: 601  ---------FCRFLMPTIRGAEQGSKKRYAGLIREGDSERMVFKGLESVRTDWTPLAQQF 651

Query: 955  QAELFDKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLAD 1014
            Q EL+ +  H    EE                      +   EL D +     + + L +
Sbjct: 652  QQELYSRIFHRQPWEEYVRTTVT--------------QLLAGELDDQLIYKKRLRRPLKE 697

Query: 1015 YGEQKSCAVTTARRLSD----FLGDTMVKDKGLRCQYIVAC-EPQGTPVSERAVPV 1065
            Y E+       A RL+D     LG  +    G R +Y++A   P+  PV  R  P+
Sbjct: 698  Y-ERNVPPHVRAARLADEHNRKLGRPLQYQTGGRIRYVIATGGPE--PVEARTTPL 750


>gi|414866310|tpg|DAA44867.1| TPA: hypothetical protein ZEAMMB73_793002 [Zea mays]
          Length = 742

 Score = 59.7 bits (143), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 32/89 (35%), Positives = 48/89 (53%), Gaps = 1/89 (1%)

Query: 588 ECPLIYHLDVAAMYPNIILTNRLQPPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEIFM 647
           +C   +   ++    N + T  + PPSIVTD  CT CD  RPGK CL KLEWVWR     
Sbjct: 285 QCGSCHRSIISGTLSNRLATCVMLPPSIVTDVDCTTCDSKRPGKNCLIKLEWVWRSLNIQ 344

Query: 648 GKRS-DYYHLKKQIESEFVDGTNGHLSKS 675
           G  + +    + Q   + +D ++G +S++
Sbjct: 345 GHAAGNIRAFRSQNIFKKIDFSSGAVSEA 373


>gi|269986765|gb|EEZ93044.1| DNA polymerase B region [Candidatus Parvarchaeum acidiphilum
           ARMAN-4]
          Length = 738

 Score = 59.7 bits (143), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 89/358 (24%), Positives = 148/358 (41%), Gaps = 51/358 (14%)

Query: 195 EYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLLEKRVD-LLQRAEVHVCAFDIETTKLPL 253
           E D+P++ R+ +D  +  G +  + I S G  ++   D  +    ++V A DIET     
Sbjct: 103 EADIPFYKRYLLDKGI--GTFNRLIIDSEGDYIKNIKDEGIADFPINVAAIDIETFS-KH 159

Query: 254 KFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNVNNEIEL 313
            FP+   D I+ +S +  G    I       ++I                     +E +L
Sbjct: 160 SFPNPKSDPIIAVSIVSAGLKKCITWLNAESDNI-----------------IKAKDEKDL 202

Query: 314 LRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDKNQGECRAKFA 373
           L      +      + V YN D FD P++  RA   GF+ +   GF+  K +GE R K A
Sbjct: 203 LLKLSEILSSNNFNVIVGYNSDSFDMPYIAERAKILGFRFTVS-GFEL-KIKGE-RKKVA 259

Query: 374 -----CHLDCFAWVKRDSY----LPQGSQGLKAVTKAKLGYDPLEVNPEDM------VRF 418
                 H+D   ++ R+ Y    L      L+ V     G    E N +D+      V+ 
Sbjct: 260 EINGLAHIDILNFI-RNIYSIYNLKTEVLTLREVAAEITGERKGEFNWDDINEVFSNVKL 318

Query: 419 AKEKPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMV 478
           A E    +  Y + D+  T  ++ T V P I  L  ++  +  +V R  +G + E L+M 
Sbjct: 319 ATE----LCEYCIQDSNITLLVFNT-VLPLITELNKLVGQTFADVSRMATGIVVENLIMK 373

Query: 479 QAYKANVICPNKHQSDPEKFYRNHLLESETYIGGHVECLESGVFRSDLPTSFK-LDPS 535
            A   N + PNK    P  F  N  ++ +  +G  V    +G++ +     F+ L PS
Sbjct: 374 HAVIKNELIPNK----PSDFQINDRIK-KINVGAFVFQPTAGLYENIAVVDFRSLYPS 426



 Score = 54.7 bits (130), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 75/288 (26%), Positives = 111/288 (38%), Gaps = 56/288 (19%)

Query: 776  LAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIW 835
            L  K I N FYGY+    +RWY  E AG  T  G K +Q+                    
Sbjct: 489  LVLKLIANGFYGYLGYYNSRWYCFECAGATTALGRKYVQDVI------------------ 530

Query: 836  CVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSE 895
                 S  E++ FK              +  + D A     ++ QT V+       +   
Sbjct: 531  -----STAESYKFK-------------VLYADTDSAFIQFGERKQT-VNEFINGINSKLP 571

Query: 896  CSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQ 955
              +E E+ G Y   I  +SK  GI  KK+YA+ + DG +  +KGF+  RR    + K  Q
Sbjct: 572  KPMELELQGFYARAIFVSSK-GGIGAKKKYAMSDLDGNIT-IKGFQSVRRDWAVIAKNLQ 629

Query: 956  AELFDKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLADY 1015
             E+ +K L  +  E    AVA V N    +   Q         +D +   + + K  + Y
Sbjct: 630  KEVLNKILLENDKE---GAVATVKNIIEKIKTGQAG-------LDELVILTRLRKDPSSY 679

Query: 1016 GEQKSCAVTTARRLSDFLGDTMVKDKGLRCQYIVACEPQGTPVSERAV 1063
             +       T R +S      M    G   +YI+A       VSE+AV
Sbjct: 680  QQ-------TNRHISAVEKSGMKFVSGDTIKYIIAKGKNNESVSEKAV 720


>gi|194749801|ref|XP_001957325.1| GF10365 [Drosophila ananassae]
 gi|190624607|gb|EDV40131.1| GF10365 [Drosophila ananassae]
          Length = 1092

 Score = 59.7 bits (143), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 85/334 (25%), Positives = 135/334 (40%), Gaps = 73/334 (21%)

Query: 66  IDLYFVSQDGSTFKSK-YKFRPYFYAATKEKMEMDVEAYLRRRYESQ-IADI-------- 115
           + ++ V+ DG++     + F PYFY    +K E      L++  + + IADI        
Sbjct: 105 VRMFGVTMDGNSVCCHVHGFCPYFYIEAPKKFEERHCEKLQQALDQKVIADIRNNKDNVQ 164

Query: 116 ------EILEKEDLDLKNHLSGLHKSYLKISFDTVQQLMDVKKDLLHVVERNQAKFDAAE 169
                 E++EK  L++  +     + Y+KIS  T+ + +     LL      + +   AE
Sbjct: 165 EAVLMVELVEK--LNIHGYNGDKKQRYIKISV-TLPRFVAAASRLL------KKEVIMAE 215

Query: 170 AYESILTGKREQRPQDFLDCIVDLREYDVPYHIRFAIDNDVRCGQWYDVS-------ISS 222
                          DF DC     E ++ + IRF +D  V    W ++         S 
Sbjct: 216 I--------------DFQDCRA--FENNIDFDIRFMVDTSVVGCNWIELPKGEWRLRSSH 259

Query: 223 TGPLLEKRVDL------------------LQRAEVHVCAFDIETTKLPLKFPDADYDIIM 264
           + PL E R  +                   + A   + +FDIE       FP+A  D ++
Sbjct: 260 SKPLPESRCQIEVDVAFDKFISHEPEGEWAKVAPFRILSFDIECAGRKGIFPEAKMDPVI 319

Query: 265 MISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNVNNEIELLRLWFAHMQEV 324
            I+ M+  QG     RE    ++  L+    P      +V   + E +LL  W A ++EV
Sbjct: 320 QIANMVIRQG----EREPFIRNVFTLDEC-APIIGS--QVLCHDKETQLLDRWSAFVREV 372

Query: 325 KPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELG 358
            P I   YN + FD P+L  RAAH   K  E LG
Sbjct: 373 DPDILTGYNINNFDIPYLLNRAAHLKVKNFEYLG 406


>gi|321459075|gb|EFX70133.1| hypothetical protein DAPPUDRAFT_257509 [Daphnia pulex]
          Length = 59

 Score = 59.7 bits (143), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 30/58 (51%), Positives = 39/58 (67%), Gaps = 1/58 (1%)

Query: 358 GFQCDKNQGECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDM 415
           G+  DK +G    + + H  CF W+KRDSYLP GS+  KA   AKL YDP+E++PEDM
Sbjct: 3   GWDRDK-EGIYSCRPSIHWVCFNWIKRDSYLPVGSKYRKASAMAKLRYDPVELDPEDM 59


>gi|399911216|ref|ZP_10779530.1| DNA polymerase II [Halomonas sp. KM-1]
          Length = 794

 Score = 59.3 bits (142), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 64/231 (27%), Positives = 97/231 (41%), Gaps = 45/231 (19%)

Query: 743 KVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMA 802
           +VW+G+   AK  GN+               L  A K I+NSFYG +  +G R++   +A
Sbjct: 481 RVWQGR-DAAKREGNA--------------PLSQALKIIMNSFYGVLGSRGCRFFDPRLA 525

Query: 803 GVVTYTGAKIIQNARLLIEKIG-KPLELDTDGIWCVLPGSFPENFTFKTKDLKKKLTISY 861
             +T  G +I++  R LIE  G   +  DTD  +  L  +  E    +   + ++L    
Sbjct: 526 SSITLRGHEIMRRTRELIEAEGYTVIYGDTDSTFVWLGSAHEEP---EAHAIGQRLA--- 579

Query: 862 PCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEFEVDGPYKAMILPA--SKEEGI 919
                    AR N   +       ++  Y   S   ++FE    Y+  ++P     EEG 
Sbjct: 580 ---------ARVNGWWEAH-----LAAEYGLTSALELQFETH--YRRFLMPTIRGAEEG- 622

Query: 920 LIKKRYAVFNDDGTLAE---LKGFEIKRRGELKLIKVFQAELFDKFLHGST 967
             KKRYA    D   AE    KG E  R     L K+FQ EL+ +   G +
Sbjct: 623 -SKKRYAGLVRDAQGAESVVFKGLETVRADWTPLAKIFQQELYRRIFVGES 672


>gi|398797110|ref|ZP_10556435.1| DNA polymerase elongation subunit (family B) [Pantoea sp. GM01]
 gi|398103785|gb|EJL93948.1| DNA polymerase elongation subunit (family B) [Pantoea sp. GM01]
          Length = 786

 Score = 59.3 bits (142), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 81/355 (22%), Positives = 133/355 (37%), Gaps = 68/355 (19%)

Query: 725  VDTVRSFRDRRYEYKG------LNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAH 778
             D+V  FR+ R+          + ++W+G+   AK  GN                L  A 
Sbjct: 450  ADSVPGFRNARFSRDTHCLPAIVEQIWQGR-EAAKRDGNK--------------PLSQAL 494

Query: 779  KCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIG-KPLELDTDGIWCV 837
            K I+N+FYG +     R++   +A  +T  G  I+Q  R LIE  G   +  DTD  +  
Sbjct: 495  KIIMNAFYGVLGTSACRFFDPRLASSITLRGHAIMQQTRELIEAEGFDVIYGDTDSTFVW 554

Query: 838  LPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECS 897
            L G+  E        + ++L                + N  +Q     +  TY   S   
Sbjct: 555  LKGAHSEE---DATAIGRRLA--------------EHVNGWWQ---QHLQATYGLASALE 594

Query: 898  IEFEVDGPYKAMILPASKEEGILIKKRYA--VFNDDGTLAELKGFEIKRRGELKLIKVFQ 955
            +E+E    +   ++P  +      KKRYA  + +D G     KG E  R     L + FQ
Sbjct: 595  LEYETH--FSRFLMPTIRGAEQGSKKRYAGMIRSDGGERLVFKGLESVRTDWTPLAQQFQ 652

Query: 956  AELFDKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLADY 1015
              L+ +   G                W D +      +   EL + +     + ++L DY
Sbjct: 653  QNLYGRIFRGEP--------------WQDYIRETVAQLLAGELDEQLIYKKRLRRALKDY 698

Query: 1016 GEQKSCAVTTARRLSD----FLGDTMVKDKGLRCQYIVACE-PQGTPVSERAVPV 1065
             E+       A RL+D     L   +    G   +Y++A   P+  P+  R  P+
Sbjct: 699  -ERNVPPHVRAARLADEQNRKLQRPLQYQNGGSIRYVMATSGPE--PLEARNTPL 750


>gi|18313158|ref|NP_559825.1| DNA polymerase I [Pyrobaculum aerophilum str. IM2]
 gi|18160670|gb|AAL64007.1| DNA-directed DNA polymerase (B1) [Pyrobaculum aerophilum str. IM2]
          Length = 855

 Score = 58.9 bits (141), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 99/411 (24%), Positives = 171/411 (41%), Gaps = 74/411 (18%)

Query: 133 HKSYLKISFDTVQQLMDVKKDLL------HVVERNQAKFDAAEAYESILTGKREQRP--- 183
           HK YL I+  T +++++   ++L      H+    + K+DA    + ++T    + P   
Sbjct: 75  HKPYL-ITLKTPEEIIEKYPNVLRHPGFSHLAV--EEKYDALNDRKILVTKVYAKDPLSV 131

Query: 184 ----QDFLDCIVDLREYDVPYHIRFAIDNDVRCGQWY----------DVSISST------ 223
                   D + +  E  + YH  +  D ++  G WY          ++SI S       
Sbjct: 132 GGSKNSLRDILKETWESRIKYHHSYLFDRNIIPGMWYKSNGNGLSPVEISIPSEIKASLS 191

Query: 224 -------GPLLEKRVDLLQRAEVHV--CAFDIET-TKLPLKFPD---ADYDIIMMISYML 270
                    + E+ + L Q    H+   A D+E  T    K PD   A+++II +     
Sbjct: 192 NIFKPEHAKVAEEWIPLFQAPIPHLKRVAIDLEVYTPQENKIPDPKNAEFEIISVALVGS 251

Query: 271 DG-QGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNVNNEIELLRLWFAHMQEVKPGIY 329
           DG +  L++ R   G +I DL Y  +P++E  F     ++E +L+R  F  +  V+  I 
Sbjct: 252 DGLRRVLLLKRP--GLEI-DLRY--RPDYEVLF----FDSEYDLIREVFKII--VQYPIV 300

Query: 330 VTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDKNQGECRAKFACHLDCFAWVKRDSY-- 387
           +T+NGD FD P+L  RA   G    EEL     ++          H+D F +    +   
Sbjct: 301 ITFNGDNFDLPYLYNRALALGMS-KEELPIAAKRDY--VSVSPGVHIDTFKFFAIKAIEA 357

Query: 388 -----LPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQMMASYSVSDAVATYYLYM 442
                + +G +GL  +  A LG   +E   +++ R    +   +A Y+  DA+ T Y  M
Sbjct: 358 YAFGGVYRGERGLDGIAYAILGIGKVE-RQKNISRMNYWE---LAEYNYRDALITLYFTM 413

Query: 443 ---TYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVICPNK 490
                V   I  L+ I  M  +++ R         +L  +  K   + PNK
Sbjct: 414 YNNEMVMKLILLLSRIAKMPIEDITRSQVSAWIRNMLYYEHRKRGWLIPNK 464


>gi|24373385|ref|NP_717428.1| DNA polymerase II PolB [Shewanella oneidensis MR-1]
 gi|24347654|gb|AAN54872.1| DNA polymerase II PolB [Shewanella oneidensis MR-1]
          Length = 808

 Score = 58.9 bits (141), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 79/299 (26%), Positives = 128/299 (42%), Gaps = 47/299 (15%)

Query: 774  LQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIG-KPLELDTD 832
            L  A K I+NS YG +  +G  ++  ++A  +T  G +I++  R  IE++G + +  DTD
Sbjct: 514  LSQAIKIIMNSLYGVLGSQGCVFHDAKLASSITMRGHQIMKQTRAWIEEMGYQVIYGDTD 573

Query: 833  GIWCVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYET 892
              +  L G  P+        L K++             A+ N N Q +     ++K +E 
Sbjct: 574  STFVHL-GYEPD--LSDISALGKQIA------------AQINANWQAK-----ITKDFEL 613

Query: 893  HSECSIEFEVDGPYKAMILPA--SKEEGILIKKRY--AVFNDDGTL-AELKGFEIKRRGE 947
             S   ++FE    Y+   +P     EEG   KKRY  A  N  G L    KG E  R   
Sbjct: 614  ESFLELQFERH--YEQFFMPTLRGSEEG--SKKRYVGAWRNVSGELEITFKGMEQVRSDW 669

Query: 948  LKLIKVFQAELFDKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESST 1007
              L +  QAEL+++  +   I    +          D++        D ELI     S  
Sbjct: 670  SPLARKVQAELYERMFNQRDISGYLA----------DVIGELQAGKRDDELI----FSKR 715

Query: 1008 MSKSLADYGEQKSCAVTTARRLSDFLGDTMVKDKGLRCQYIVACE-PQGTPVSERAVPV 1065
            M ++L +Y  + S  V  AR+L +  G      +G +  Y++    P+  PVS R+  +
Sbjct: 716  MRRNLEEYTAKSSPHVKVARQLCELTGKASYSKRGAQIDYVITVNGPE--PVSHRSSTI 772


>gi|170067371|ref|XP_001868453.1| DNA polymerase delta catalytic subunit [Culex quinquefasciatus]
 gi|167863529|gb|EDS26912.1| DNA polymerase delta catalytic subunit [Culex quinquefasciatus]
          Length = 1100

 Score = 58.9 bits (141), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 71/318 (22%), Positives = 126/318 (39%), Gaps = 45/318 (14%)

Query: 68  LYFVSQDGSTFKSK-YKFRPYFYAATKEKMEMDVEAYLRRRYESQIADIEILEKEDLDLK 126
           ++ ++Q+G++  +  + F PY Y A          A  R   +  + +         D++
Sbjct: 118 MFGITQEGNSVCAHVHGFTPYLYVAAPRGFGKSHLAEFRTALDKSVLN---------DMR 168

Query: 127 NHLSGLHKSYLKISFDTVQQLMDVKKDLLHVVERNQAKFDAAEAYESILTGKREQRPQ-D 185
           ++   + ++ L +     Q +M    +      R         A    L  K +  P  D
Sbjct: 169 SNKENVQEAVLDVELVERQSIMGYNGEEKFSFIRVSVALPRLLAAVKRLLEKEQMMPSMD 228

Query: 186 FLDCIVDLREYDVPYHIRFAIDNDVRCGQWYDVSIS-------STGPLLEKRVDL----- 233
           F DC V   E ++ + IRF +D +V    W ++            G  LE R  +     
Sbjct: 229 FQDCRV--YESNIDFDIRFMVDTNVVGCSWIEIPQGKWRIRRKGKGLALETRCQIEIDVA 286

Query: 234 -------------LQRAEVHVCAFDIETTKLPLKFPDADYDIIMMISYMLDGQGYLIINR 280
                         + A   + +FDIE       FP+  +D ++ I+ M+  QG    ++
Sbjct: 287 YNEFIVHDPEGEWSKVAPFRILSFDIECAGRKGIFPEPQHDPVIQIANMVIRQG----DQ 342

Query: 281 ECVGEDIEDLEYTPKPEFEGYFKVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWP 340
           E    ++  L+ +  P      +V +  +E ELL  W + ++E+ P I   YN + FD P
Sbjct: 343 EPFLRNVFTLK-SCAPIVGS--QVLSYESEQELLDKWASFVRELDPDILTGYNINNFDIP 399

Query: 341 FLETRAAHHGFKMSEELG 358
           +L  RA H   K  E LG
Sbjct: 400 YLLNRANHLKVKNFEYLG 417


>gi|167624647|ref|YP_001674941.1| DNA polymerase II [Shewanella halifaxensis HAW-EB4]
 gi|167354669|gb|ABZ77282.1| DNA polymerase B region [Shewanella halifaxensis HAW-EB4]
          Length = 813

 Score = 58.9 bits (141), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 71/289 (24%), Positives = 114/289 (39%), Gaps = 47/289 (16%)

Query: 774  LQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIG-KPLELDTD 832
            L  A K I+NS YG +  +G  ++   +A  +T  G +I++  R  IE  G + +  DTD
Sbjct: 519  LSQAIKIIMNSLYGVLGSRGCVFHDARLASSITMRGHEIMKQTRRWIESEGYEVIYGDTD 578

Query: 833  GIWCVLPGSF-PENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYE 891
              +  L   F P       K L KK+                      Q   D +S  ++
Sbjct: 579  STFVWLGNDFDPAKVLQTGKALAKKVN---------------------QLWGDKLSNEFD 617

Query: 892  THSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAE----LKGFEIKRRGE 947
              S   +EFE    ++   +P  +      KKRY V      L +     KG E  R   
Sbjct: 618  LESFLELEFETH--FEQFFMPTLRGSIEGSKKRY-VGTKRNNLGDSELIFKGMEQVRSDW 674

Query: 948  LKLIKVFQAELFDKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESST 1007
              L +  Q EL+D+      +E     +    NR  DL         D+EL+     +  
Sbjct: 675  SPLARRIQYELYDRLFQQQDVESYLREIVDKLNRG-DL---------DNELV----FTKQ 720

Query: 1008 MSKSLADYGEQKSCAVTTARRLSDFLGDTMVKDKGLRCQYIV---ACEP 1053
            + + L +Y  + +  +  AR+L D  GD+    +G R +Y++     EP
Sbjct: 721  LRRDLEEYTAKSAPHLKAARKLCDATGDSQYGKRGARIEYVMTLNGAEP 769


>gi|114563795|ref|YP_751308.1| DNA polymerase II [Shewanella frigidimarina NCIMB 400]
 gi|114335088|gb|ABI72470.1| DNA damage-inducible DNA polymerase II [Shewanella frigidimarina
            NCIMB 400]
          Length = 792

 Score = 58.9 bits (141), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 72/286 (25%), Positives = 122/286 (42%), Gaps = 50/286 (17%)

Query: 774  LQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIG-KPLELDTD 832
            L  A K I+NS YG +  +G  ++  ++A  +T  G +I++  +  IE+ G + +  DTD
Sbjct: 498  LSQAIKIIMNSLYGVLGSRGCVFHDAKLASSITMRGHQIMKLTKQWIEECGYQVIYGDTD 557

Query: 833  GIWCVLPGSFPENFTFK-TKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYE 891
              +  L     +N   K  + + K L++S                   Q  ++   + Y+
Sbjct: 558  STFVWL----GDNHGIKDIQAVGKHLSVSIT-----------------QRWLEWCVEEYQ 596

Query: 892  THSECSIEFEVDGPYKAMILPASKEEGILIKKRY--AVFNDDGTLA-ELKGFEIKRRGEL 948
              S   +EFE    ++  I+P  +      KKRY  AV ND   L    KG E  R    
Sbjct: 597  LDSYLELEFETH--FEQFIMPTLRGSDEGSKKRYVGAVSNDQQQLTLTFKGMEQVRSDWS 654

Query: 949  KLIKVFQAELFDKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIA----DSELIDYISE 1004
             + +  Q  L++ F  G  +              +D L N+   I     D+ELI     
Sbjct: 655  PIARRMQYHLYELFFKGEDV--------------IDFLSNELAAIKCGARDNELI----F 696

Query: 1005 SSTMSKSLADYGEQKSCAVTTARRLSDFLGDTMVKDKGLRCQYIVA 1050
               + +++ DY  + S  V  A++L++ LGD  V  KG + +YI+ 
Sbjct: 697  KKRLRRNVEDYTAKSSPHVKAAKQLAELLGDVSVTRKGQQIRYIMT 742


>gi|322834447|ref|YP_004214474.1| DNA polymerase B region [Rahnella sp. Y9602]
 gi|321169648|gb|ADW75347.1| DNA polymerase B region [Rahnella sp. Y9602]
          Length = 780

 Score = 58.9 bits (141), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 60/232 (25%), Positives = 95/232 (40%), Gaps = 50/232 (21%)

Query: 741 LNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHKCILNSFYGYVMRKGARWYSME 800
           + ++W G+  EAK   N                L  A K I+N+FYG +   G R++   
Sbjct: 466 VRQIWMGR-EEAKKQKNK--------------PLSQALKIIMNAFYGVLGSSGCRFFDPR 510

Query: 801 MAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLPGSFPENFTFKTKDLKKKLTIS 860
           +A  +T  G  I++  R LIE  G          + V+ G     F              
Sbjct: 511 LASSITLRGHDIMRQTRELIEAEG----------YQVIYGDTDSTF-------------- 546

Query: 861 YPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHS------ECSIEFEVDGPYKAMILPAS 914
              V LN   ++ + +   + LV+ V+  ++ H       E ++E E +  Y+  ++P  
Sbjct: 547 ---VWLNKAHSQEDADVIGRHLVERVNAWWKAHLQQEYRLESALELEFETHYQRFLMPTI 603

Query: 915 KEEGILIKKRYA-VFND-DGTLAELKGFEIKRRGELKLIKVFQAELFDKFLH 964
           +      KKRYA + ND DG     KG E  R    KL + FQ EL+ +  H
Sbjct: 604 RGSETGSKKRYAGLVNDADGEHIVYKGLETVRTDWTKLAQEFQQELYQRIFH 655


>gi|71279212|ref|YP_268993.1| DNA polymerase II [Colwellia psychrerythraea 34H]
 gi|71144952|gb|AAZ25425.1| DNA polymerase II [Colwellia psychrerythraea 34H]
          Length = 818

 Score = 58.9 bits (141), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 57/205 (27%), Positives = 94/205 (45%), Gaps = 32/205 (15%)

Query: 773 SLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIG-KPLELDT 831
           +L  A K I++SFYG +   G R++   ++G +T    +I++   + IEK+G + +  DT
Sbjct: 519 ALSQAIKIIMSSFYGVLGSTGCRFFDPRLSGSITKRSHEILKKTSVWIEKLGYQVIYGDT 578

Query: 832 DGIWCVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYE 891
           D I+  +          KTK   K+L              R+  ND++Q   + + + ++
Sbjct: 579 DSIFVSIGAE-------KTKTQAKQLGAEL----------RSYINDKWQ---NRLKRDFD 618

Query: 892 THSECSIEFEVDGPYKAMILPASK-------EEGILIKKRYAVFNDDGTLAELKGFEIKR 944
             S+  IEFE    +   ++P  +       ++ I  KKRYA  + DG L   KG E  R
Sbjct: 619 IESQLDIEFETH--FTKFLMPTIRGIHTVKDQKSIGTKKRYAGVS-DGELV-FKGLETVR 674

Query: 945 RGELKLIKVFQAELFDKFLHGSTIE 969
                L K FQ EL+    +   IE
Sbjct: 675 SDWTDLSKDFQQELYRLIFNDQPIE 699


>gi|157103868|ref|XP_001648163.1| DNA polymerase delta catalytic subunit [Aedes aegypti]
 gi|108869323|gb|EAT33548.1| AAEL014178-PA [Aedes aegypti]
          Length = 984

 Score = 58.9 bits (141), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 70/318 (22%), Positives = 131/318 (41%), Gaps = 45/318 (14%)

Query: 68  LYFVSQDGSTFKSK-YKFRPYFYAATKEKMEMDVEAYLRRRYESQIADIEILEKEDLDLK 126
           ++ ++++G++  +  + F PY Y A     +       R+  +  + +         D++
Sbjct: 3   MFGITEEGNSVCAHVHGFAPYLYVAAPRGFDRSHLCEFRKALDKSVMN---------DMR 53

Query: 127 NHLSGLHKSYLKISFDTVQQLMDVK-KDLLHVVERNQAKFDAAEAYESILTGKREQRPQD 185
           ++   + ++ L +     Q ++    +D    ++   A      A + +L  ++     D
Sbjct: 54  SNKENVQEAVLDVELVERQSILGYNGEDKFTFIKVTVALPRLLAAVKRLLEKEQMMPSMD 113

Query: 186 FLDCIVDLREYDVPYHIRFAIDNDVRCGQWYDVSISS-------TGPLLEKR----VDLL 234
           F DC V   E ++ + IRF +D  V    W ++   S         P  E R    VD+ 
Sbjct: 114 FQDCRV--YESNIDFDIRFMVDTGVVGCSWIELPAGSWRMRQKGKIPAPETRCQIEVDVA 171

Query: 235 --------------QRAEVHVCAFDIETTKLPLKFPDADYDIIMMISYMLDGQGYLIINR 280
                         + A   + +FDIE       FP+  +D ++ I+ M+  QG    ++
Sbjct: 172 YNVFIAHEPEGEWSKVAPFRILSFDIECAGRKGIFPEPQHDPVIQIANMVIRQG----DQ 227

Query: 281 ECVGEDIEDLEYTPKPEFEGYFKVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWP 340
           E    ++  L  T  P      +V +   E ELL  W + ++E+ P I   YN + FD P
Sbjct: 228 EPFLRNVFTLN-TCAPIVGS--QVLSYKTEQELLDKWASFVRELDPDILTGYNINNFDIP 284

Query: 341 FLETRAAHHGFKMSEELG 358
           +L  RA+H   K  E LG
Sbjct: 285 YLLNRASHLKVKNFEYLG 302


>gi|161528456|ref|YP_001582282.1| DNA polymerase I [Nitrosopumilus maritimus SCM1]
 gi|160339757|gb|ABX12844.1| DNA polymerase B region [Nitrosopumilus maritimus SCM1]
          Length = 852

 Score = 58.9 bits (141), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 71/266 (26%), Positives = 115/266 (43%), Gaps = 32/266 (12%)

Query: 297 EFEGYFKVT--NVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMS 354
           E +   KVT  +++ E E++   F  ++E  P + VTYNGD FD P+L  RA   G K S
Sbjct: 255 ELDQNIKVTFYDLDKEKEMIYDAFKIIKEF-PFV-VTYNGDEFDLPYLYNRAERLGIKSS 312

Query: 355 EELGFQCDKNQGECRAKFACHLDCF-AWVKRDSYLPQGSQ-----GLKAVTKAKLGYDPL 408
           E   +     +     K   HLD +  +  R   +   SQ      L  V+KA LG + +
Sbjct: 313 ENPFYMM---RDSATLKHGVHLDLYRTFSNRSFQIYAFSQKYTNFSLNEVSKALLGKEKI 369

Query: 409 EVNPEDMVRFAKEKPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIP----MSPDEVL 464
           +   E    F +      A+Y  +DA+ TY L  ++    +  L  II     M  D++ 
Sbjct: 370 DYGLE----FDQLTLYQTANYCYNDALLTYEL-TSFNSELLMQLLVIIARIGRMPIDDIA 424

Query: 465 RKGSGTLCEMLLMVQAYKANVICPNKHQSD--PEKFYRNHLLESETYIGGHVECLESGV- 521
           R G       LL  +  K N + P + + +   E    + +++ + Y GG V   + G+ 
Sbjct: 425 RMGVSQWIRSLLYYEHRKRNCLIPKRQELERRSEGVMSDAVIKDKKYRGGLVVEPKEGIH 484

Query: 522 -------FRSDLPTSFKLDPSAYEQL 540
                  F S  P+  K+   +YE +
Sbjct: 485 FDVVVMDFASLYPSIIKVRNLSYETV 510


>gi|26989116|ref|NP_744541.1| DNA polymerase II [Pseudomonas putida KT2440]
 gi|24983948|gb|AAN68005.1|AE016432_14 DNA polymerase II [Pseudomonas putida KT2440]
          Length = 786

 Score = 58.9 bits (141), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 65/245 (26%), Positives = 100/245 (40%), Gaps = 47/245 (19%)

Query: 727 TVRSFRDRRYEYKG------LNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHKC 780
           +V  FR  R+          + +VW+G+   AK  GN+               L  A K 
Sbjct: 451 SVEGFRGGRFSRTQHCLPAIVERVWQGR-EAAKREGNA--------------PLSQALKI 495

Query: 781 ILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIG-KPLELDTDGIWCVLP 839
           I+N+FYG +   G R++   +A  +T  G +I++  R LIE  G   +  DTD  +  L 
Sbjct: 496 IMNAFYGVLGSSGCRFFDPRLASSITMRGHQIMRQTRSLIEACGYDVIYGDTDSTFVWLK 555

Query: 840 GSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIE 899
           G+  E        + ++L            VA+ N   Q       + +T   HS   ++
Sbjct: 556 GAHAEE---DAARIGREL------------VAKVNQWWQAH-----LHETMNLHSALELQ 595

Query: 900 FEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAE---LKGFEIKRRGELKLIKVFQA 956
           FEV   Y+  ++P  +      KKRYA        AE    KG E  R     L + FQ 
Sbjct: 596 FEVH--YRRFLMPTIRGTDEGSKKRYAGLVQRADGAEEMVYKGLESVRTDWSPLARQFQQ 653

Query: 957 ELFDK 961
           EL+ +
Sbjct: 654 ELYGR 658


>gi|254442198|ref|ZP_05055674.1| DNA polymerase family B [Verrucomicrobiae bacterium DG1235]
 gi|198256506|gb|EDY80814.1| DNA polymerase family B [Verrucomicrobiae bacterium DG1235]
          Length = 755

 Score = 58.9 bits (141), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 79/317 (24%), Positives = 136/317 (42%), Gaps = 66/317 (20%)

Query: 771  YDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIG-KPLEL 829
            Y++ Q + K ++NSFYGY+   GAR+    +A  VT  G +I+Q       + G +PLE 
Sbjct: 474  YNARQSSFKILINSFYGYLGFSGARFGDAALAAEVTARGREILQGLITFFREAGCEPLEA 533

Query: 830  DTDGIWCVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKT 889
            DTDGI+                                  V+  +  ++ + L++   + 
Sbjct: 534  DTDGIY----------------------------------VSAGDYFNREEALLEKAQRG 559

Query: 890  YETHSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELK 949
                    IE E DG Y +M    +K         YA+F  DG    ++G  +K RG   
Sbjct: 560  LPD----GIELEYDGKYVSMFCYKAKN--------YALF--DGEKVIIRGSGLKSRGVEP 605

Query: 950  LIKVFQAELFDKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMS 1009
             +K    +L   +L G   E+     A +A R  D + +Q      +  ++ +++S  +S
Sbjct: 606  FLKTLTFQLIG-YLLGQEKEDP----AVLAQRVEDGIRSQ------TLPVESVAKSEVLS 654

Query: 1010 KSLADYGEQKSCAVTTARRLSDFLGDTMVKD--KGLRCQYIVACEPQG-TPVSERAVPVA 1066
            ++   Y ++K  A    RR S  +   + K    G R  + +A + +G T   +RA PV 
Sbjct: 655  QNPEAY-QKKIEAGGKPRRASAEVALKLEKPVAMGDRVTFFMAPKERGQTADWQRAYPVE 713

Query: 1067 IFETDAEI--MKFYLRK 1081
             ++ D+     K+YL+K
Sbjct: 714  HYDKDSLPYDAKYYLKK 730


>gi|432331535|ref|YP_007249678.1| DNA polymerase elongation subunit (family B) [Methanoregula
            formicicum SMSP]
 gi|432138244|gb|AGB03171.1| DNA polymerase elongation subunit (family B) [Methanoregula
            formicicum SMSP]
          Length = 821

 Score = 58.5 bits (140), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 74/274 (27%), Positives = 109/274 (39%), Gaps = 52/274 (18%)

Query: 769  VLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIG-KPL 827
            ++YD  Q   K I+N++YG       R +  E+   VT  G  II++ R  IEK+G   +
Sbjct: 508  IMYDMQQNVLKVIMNTYYGVSGYTRFRLFDREIGAAVTSVGRAIIEHTRREIEKMGYTVI 567

Query: 828  ELDTDGIWCVLPGSFPENFTFKTKDLKKKLTISYPCVM---LNVDVARNNTNDQYQTLVD 884
              DTD     LP    E      + ++K+L  SYP      LN DV              
Sbjct: 568  YGDTDSCMIQLPPLDREKTIEIARSIEKQLNASYPVFAKTELNADV-------------- 613

Query: 885  PVSKTYETHSECSIEFEVDGPYKAMILPASKEEGILIKKRYA---VFNDDGTLAE--LKG 939
                     S  SI+FE      A    A K      KKRYA   V+ +   + E  + G
Sbjct: 614  ---------SFFSIKFE---KIYARFFQAGK------KKRYAGSLVWKEGKDVQETDIVG 655

Query: 940  FEIKRRGELKLIKVFQAELFDKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELI 999
            FEIKR    ++ K  Q  + +  L G  ++E  + +  V  ++           A    +
Sbjct: 656  FEIKRSDTPQITKHVQKTVMELILDGKGLDEVKAFLGEVIKKYR----------AGKYTL 705

Query: 1000 DYISESSTMSKSLADYGEQKSCAVTTARRLSDFL 1033
            D I     + KSL DY E     V  A+  + +L
Sbjct: 706  DEIGIPGGIGKSLDDY-ETDDAQVRGAKYANQYL 738


>gi|300311755|ref|YP_003775847.1| DNA polymerase II protein [Herbaspirillum seropedicae SmR1]
 gi|300074540|gb|ADJ63939.1| DNA polymerase II protein [Herbaspirillum seropedicae SmR1]
          Length = 790

 Score = 58.5 bits (140), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 67/278 (24%), Positives = 114/278 (41%), Gaps = 49/278 (17%)

Query: 721 NSFYVDTVRSFRDRRYEYKG------LNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSL 774
           N     TV  F   R+  +       + ++W+ +  +AKA GN               +L
Sbjct: 449 NESEAQTVPGFNGARFSRRSHSLPAIIEQIWQAR-EQAKAQGNK--------------AL 493

Query: 775 QLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIG-KPLELDTDG 833
           Q A K I+NSFYG +   G R++   +A  +T  G +I+   R LIE+ G + +  DTD 
Sbjct: 494 QQALKIIMNSFYGVLGSTGCRFFDSRLASSITRRGHEIMHRTRELIEEQGYEVIYGDTDS 553

Query: 834 IWCVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETH 893
            +  L  +  +    + + +   LT              +  ND ++     + + Y   
Sbjct: 554 TFVWLRSAHSDE---EARSIGLALT--------------SRINDWWRL---HLRQQYGLE 593

Query: 894 SECSIEFEVDGPYKAMILPASKEEGILIKKRYAVF---NDDGTLAELKGFEIKRRGELKL 950
           S   +++EV   Y+  ++P  +      KKRYA +    +       KG E  R     L
Sbjct: 594 SALELQYEVH--YQRFLMPTVRGSDTGSKKRYAGYVRTAEGEDKVTYKGLETVRTDWTPL 651

Query: 951 IKVFQAELFDKFLHGSTIEECYSAVAA--VANRWLDLL 986
            + FQ EL+ +   G T  +   +  A  +A R  +LL
Sbjct: 652 AQRFQQELYLRIFRGETYRDYVRSYVAELLAGRLDELL 689


>gi|403166928|ref|XP_003326779.2| DNA polymerase alpha subunit A [Puccinia graminis f. sp. tritici CRL
            75-36-700-3]
 gi|375166785|gb|EFP82360.2| DNA polymerase alpha subunit A [Puccinia graminis f. sp. tritici CRL
            75-36-700-3]
          Length = 1602

 Score = 58.5 bits (140), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 68/266 (25%), Positives = 111/266 (41%), Gaps = 69/266 (25%)

Query: 768  VVLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPL 827
            +  YD  Q+A K   NS YG +  +G+R+Y+  +A + T  G +I+ N R L E   + L
Sbjct: 1080 IAQYDIKQMALKLTANSMYGCLGFEGSRFYARPLAALTTSKGREILTNTRDLAE--SQNL 1137

Query: 828  EL---DTDGIWCVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDV----ARNNTNDQYQ 880
            ++   DTD                               VM+N +     A N   ++++
Sbjct: 1138 DVIYGDTDS------------------------------VMINTNALDFAAANKIGNEFK 1167

Query: 881  TLVDPVSKTYETHSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGT----LAE 936
             LV+   K         +E ++DG ++ M+L        L KK+YA    D      + E
Sbjct: 1168 KLVNERYKL--------LEIDIDGVFERMLL--------LQKKKYAALKVDAMTQARIVE 1211

Query: 937  LKGFEIKRRGELKLIKVFQAELFDKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADS 996
            +KG ++KRR   KL K     + ++ L G + E        V  +  + L   G+ + D 
Sbjct: 1212 VKGLDMKRREYCKLSKDASQYILEQVLSGLSTE-------LVVEKIHEYLTELGQSVKDG 1264

Query: 997  --ELIDYISESSTMSKSLADYGEQKS 1020
              EL D+I     + K   DY + KS
Sbjct: 1265 KKELDDFIIHKK-LGKDPKDYPDVKS 1289


>gi|163751896|ref|ZP_02159110.1| DNA polymerase II [Shewanella benthica KT99]
 gi|161328246|gb|EDP99410.1| DNA polymerase II [Shewanella benthica KT99]
          Length = 782

 Score = 58.5 bits (140), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 72/287 (25%), Positives = 123/287 (42%), Gaps = 43/287 (14%)

Query: 774  LQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIG-KPLELDTD 832
            L  A K I+NS YG +  +G  ++   +A  +T  G +I++  R  IE++G + +  DTD
Sbjct: 488  LSQAIKIIMNSLYGVLGSRGCVFHDARLASSITLRGHQIMKQTRAWIEELGYQVIYGDTD 547

Query: 833  GIWCVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYET 892
              +  L G  P +       + K L                  N +++  +D      E 
Sbjct: 548  STFVWL-GQDPSD--IDVDKIGKGLV--------------ETINTRWKCKLDK-----EM 585

Query: 893  HSECSIEFEVDGPYKAMILPASKEEGILIKKRY--AVFNDDGTLAEL-KGFEIKRRGELK 949
            +  C +E E +  Y+   +P  +      KKRY  A+ N++G L  + KG E  R     
Sbjct: 586  NIACHLELEFECHYEQFFMPTLRGSTEGSKKRYVGALTNNEGELQLIFKGMEQVRSDWSP 645

Query: 950  LIKVFQAELFDKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMS 1009
            L +  Q  L+ +     + ++    +  V N   DL+  QGK   D EL+     S  + 
Sbjct: 646  LARRIQEALYYRLF---SKQDVMVFLQEVVN---DLM--QGK--LDEELV----FSKRLR 691

Query: 1010 KSLADYGEQKSCAVTTARRLSDFLGDTMVKDKGLRCQYIV---ACEP 1053
            + +ADY  + S  V  A+ + DF G      +G + +Y++     EP
Sbjct: 692  RDIADYTAKSSPHVKAAKMMCDFSGSERFSKRGTKVEYLITLNGAEP 738


>gi|147918852|ref|YP_687422.1| DNA-directed DNA polymerase B [Methanocella arvoryzae MRE50]
 gi|110622818|emb|CAJ38096.1| DNA-directed DNA polymerase B [Methanocella arvoryzae MRE50]
          Length = 798

 Score = 58.5 bits (140), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 83/352 (23%), Positives = 134/352 (38%), Gaps = 80/352 (22%)

Query: 192 DLREYDVPYHIRFAIDND-VRCGQWYDVSISSTG-PLLEKRVDLLQRAE----------- 238
           D+RE D+ + +R+ ID   +  G      I + G P+    VD+    E           
Sbjct: 111 DVREADILFGVRYIIDKRLIPMG-----GIEAEGEPVEVDYVDIALNCEQPKGMPRDGEP 165

Query: 239 -VHVCAFDIETTKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPE 297
            V + AFD E    P   P+A  D I++IS              C G  +  LE + +  
Sbjct: 166 PVKIMAFDCEMFN-PRGMPNAKEDPIVLISI-------------CTGNQVRILEASNQ-- 209

Query: 298 FEGYFKVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMS-EE 356
                      N+ ++++ + A + E  P I V YN D FDWP++  RA  H  K++   
Sbjct: 210 -----------NDKQIIKDFIAFIDEYDPDIIVGYNQDSFDWPYIIERAKRHKIKLNVSR 258

Query: 357 LGFQCDKNQGECRAKFA----CHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNP 412
            G      +G  + K       ++D +    RD        G+K  T   +      +  
Sbjct: 259 DGSTPLHGRGGLQKKVKLIGRLNVDLYQVAARD------VDGVKIKTLDNIADYVGVMKK 312

Query: 413 EDMVRFA----------KEKPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDE 462
           ++ V  +           E+ + + +YS  D V+TY L    + P  +    +I    D 
Sbjct: 313 DERVNLSGVEIYQYWLDPERRKDLIAYSRDDVVSTYGLAKELL-PLQYEFTRMIHEPLDN 371

Query: 463 VLRKGSGTLCEMLLMVQAYKANVICPNKHQSDPEKFYRNHLLESETYIGGHV 514
           V + G G   E  L   AY+   + P++              E ETY GG V
Sbjct: 372 VSKMGRGRQVEAYLAYIAYEHGELIPSRAG------------EVETYAGGFV 411


>gi|417820631|ref|ZP_12467245.1| DNA polymerase II [Vibrio cholerae HE39]
 gi|419836069|ref|ZP_14359512.1| DNA polymerase II [Vibrio cholerae HC-46B1]
 gi|421342758|ref|ZP_15793163.1| DNA polymerase II [Vibrio cholerae HC-43B1]
 gi|421353985|ref|ZP_15804317.1| DNA polymerase II [Vibrio cholerae HE-45]
 gi|423734616|ref|ZP_17707828.1| DNA polymerase B family protein [Vibrio cholerae HC-41B1]
 gi|423952393|ref|ZP_17734107.1| DNA polymerase B family protein [Vibrio cholerae HE-40]
 gi|423980424|ref|ZP_17737659.1| DNA polymerase B family protein [Vibrio cholerae HE-46]
 gi|424008900|ref|ZP_17751847.1| DNA polymerase II [Vibrio cholerae HC-44C1]
 gi|340038262|gb|EGQ99236.1| DNA polymerase II [Vibrio cholerae HE39]
 gi|395943275|gb|EJH53950.1| DNA polymerase II [Vibrio cholerae HC-43B1]
 gi|395953110|gb|EJH63723.1| DNA polymerase II [Vibrio cholerae HE-45]
 gi|408630917|gb|EKL03489.1| DNA polymerase B family protein [Vibrio cholerae HC-41B1]
 gi|408660573|gb|EKL31590.1| DNA polymerase B family protein [Vibrio cholerae HE-40]
 gi|408665650|gb|EKL36463.1| DNA polymerase B family protein [Vibrio cholerae HE-46]
 gi|408857934|gb|EKL97613.1| DNA polymerase II [Vibrio cholerae HC-46B1]
 gi|408865295|gb|EKM04704.1| DNA polymerase II [Vibrio cholerae HC-44C1]
          Length = 787

 Score = 58.5 bits (140), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 54/202 (26%), Positives = 85/202 (42%), Gaps = 25/202 (12%)

Query: 777 AHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIG-KPLELDTDGIW 835
           A K I+NSFYG +   G R++   +A  +T  G +I+   + LIE  G + +  DTD  +
Sbjct: 494 AIKIIMNSFYGVLGSSGCRFFDARLASSITMRGHEIMIQTKRLIEARGYQVIYGDTDSTF 553

Query: 836 CVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSE 895
             L G + +    +  D              N+  A     +Q+ T  + + + Y   S 
Sbjct: 554 VALGGQYSQ----QEAD--------------NIGHALVREINQWWT--EHLKQEYALTSI 593

Query: 896 CSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAEL--KGFEIKRRGELKLIKV 953
             +E+E    Y+  ++P  +      KKRYA    DG   +L  KG E  R     L + 
Sbjct: 594 LELEYETH--YRRFLMPTIRGSETGSKKRYAGLKGDGDNEQLIFKGLESARTDWTPLAQR 651

Query: 954 FQAELFDKFLHGSTIEECYSAV 975
           FQ +L+    HG   E     V
Sbjct: 652 FQHQLYQLIFHGQDPESYIRTV 673


>gi|359417865|ref|ZP_09209919.1| DNA polymerase Pol2, partial [Candidatus Haloredivivus sp. G17]
 gi|358031777|gb|EHK00627.1| DNA polymerase Pol2 [Candidatus Haloredivivus sp. G17]
          Length = 329

 Score = 58.2 bits (139), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 61/219 (27%), Positives = 91/219 (41%), Gaps = 44/219 (20%)

Query: 773 SLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLEL-DT 831
           S Q A K + NSFYGY+   GARWYS E A   TY G K IQ+     E++G  +   DT
Sbjct: 47  SRQQAQKILANSFYGYLGYSGARWYSREAAEATTYLGRKYIQDTIETAEEMGFEMVYGDT 106

Query: 832 DGIWCVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYE 891
           D                               VML  D    N  +     ++ V+    
Sbjct: 107 D------------------------------SVMLRKD----NIEESMDGFLEEVN---- 128

Query: 892 THSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLI 951
           +     +E E +G +K      SK+ G   KK+YA+ ++   L ++ GFE  RR    + 
Sbjct: 129 SQLPKFMELEFEGLFKRGFF-TSKDSGEGAKKKYALIDEKANL-KITGFEQVRRDWSPIA 186

Query: 952 KVFQAELFDKFLH---GSTIEECYSAVAAVANRWLDLLD 987
           K  Q ++  K L        EE  + + A+ +  +D+ D
Sbjct: 187 KKTQKKVLGKVLQDRIDEAAEEVKTTIEALNSGNVDVED 225


>gi|374633834|ref|ZP_09706199.1| DNA polymerase elongation subunit (family B) [Metallosphaera
           yellowstonensis MK1]
 gi|373523622|gb|EHP68542.1| DNA polymerase elongation subunit (family B) [Metallosphaera
           yellowstonensis MK1]
          Length = 797

 Score = 58.2 bits (139), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 84/374 (22%), Positives = 145/374 (38%), Gaps = 63/374 (16%)

Query: 187 LDCIVDLREYDVPYHIRFAIDNDVRCGQWYDVSISS--TGPLLEKRVDLLQR-------- 236
           L  I ++ E D+ +++R++ID+ V+   W    +     G L  K+   L++        
Sbjct: 123 LKGIREVLEADIRFYMRYSIDSGVKPFHWLKAEVEEDELGGLRVKKCYKLKKILKIYEAN 182

Query: 237 -AEVHVCAFDIETTKLPLKFPDADYDIIMMIS-YMLDGQGYLIINRECVGEDIEDLEYTP 294
              +   AFDIE       FPD   D I++I  +  +G    I  R              
Sbjct: 183 PPIMRTMAFDIEVYN-KYGFPDPKRDPIIVIGVWTAEGPRQFINLR-------------- 227

Query: 295 KPEFEGYFKVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMS 354
                         ++IE++R +   + +  P I + YN + FDW +L  RA+    K+ 
Sbjct: 228 -------------GDDIEVIRDFVKFVVDYDPDIILGYNSNGFDWQYLTERASSRNLKVD 274

Query: 355 EELGFQCDKNQGECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLG--YDPLEVNP 412
                  + +QG        H      +  D  L   ++G++ V    L    D L V P
Sbjct: 275 VGRKVGSEPSQGTY-----GHFSIMGRLNVD--LLGFAEGVEEVKVKSLDNIADYLGVVP 327

Query: 413 EDMVRFAKE------------KPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSP 460
           +   R   E            K   +  Y++ DA +TY L   ++ PF   L  I  +  
Sbjct: 328 K-ASRVNLEWYQIPEYWADPKKRDTVLKYNLDDARSTYLLKDVFL-PFGEQLTIISGLPL 385

Query: 461 DEVLRKGSGTLCEMLLMVQAYKANVICPNKHQSDPEKFYRNHLLESETYIGGHVECLESG 520
           D++     G   E LLM +AYK N + PN+ +   E +    ++E +  I  +V  L+  
Sbjct: 386 DQLPMASVGYRVEWLLMREAYKFNELIPNRLERPHESYKGGLVIEPKPGIHENVVVLDFT 445

Query: 521 VFRSDLPTSFKLDP 534
                +   + + P
Sbjct: 446 SMYPSIMVKYNIGP 459


>gi|427404351|ref|ZP_18895091.1| hypothetical protein HMPREF9710_04687 [Massilia timonae CCUG 45783]
 gi|425716902|gb|EKU79869.1| hypothetical protein HMPREF9710_04687 [Massilia timonae CCUG 45783]
          Length = 790

 Score = 58.2 bits (139), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 54/213 (25%), Positives = 83/213 (38%), Gaps = 36/213 (16%)

Query: 774 LQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDG 833
           L  A K I+N+FYG +   G R++   +A  +T  G  I+   R LIE+ G         
Sbjct: 493 LSQALKIIMNAFYGVLGTTGCRFFDPRLASSITMRGHDIMHRTRELIEEQG--------- 543

Query: 834 IWCVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETH 893
            + V+ G     F                 V L  + A  +     Q LVD V+  + +H
Sbjct: 544 -YQVIYGDTDSTF-----------------VWLGREHAEGDARRIGQALVDHVNGWWRSH 585

Query: 894 ------SECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFN---DDGTLAELKGFEIKR 944
                  E ++E E D  ++  ++P  +      KKRYA      D G     KG E  R
Sbjct: 586 LQAELGIESALELEYDVHFRRFLMPTVRGSDEGSKKRYAGLAASADGGEEMVYKGLETVR 645

Query: 945 RGELKLIKVFQAELFDKFLHGSTIEECYSAVAA 977
                L + FQ  L+++   G   E+    + A
Sbjct: 646 TDWTPLAQAFQQGLYERIFKGQPYEDYVRELVA 678


>gi|126459700|ref|YP_001055978.1| DNA polymerase I [Pyrobaculum calidifontis JCM 11548]
 gi|126249421|gb|ABO08512.1| replicative DNA polymerase I [Pyrobaculum calidifontis JCM 11548]
          Length = 853

 Score = 58.2 bits (139), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 99/445 (22%), Positives = 172/445 (38%), Gaps = 76/445 (17%)

Query: 133 HKSYLKISFDTVQQLMDVKKDLL------HVVERNQAKFDAAEAYESILTGKREQRP--- 183
           H+ YL +     ++L++   DLL      H+    + K+DA      ++T    + P   
Sbjct: 73  HRPYLIVKMSP-EELVEKFPDLLKHPGFSHI--DVEEKYDALHDERIVVTKVYAKDPLTV 129

Query: 184 ----QDFLDCIVDLREYDVPYHIRFAIDNDVRCGQWY--------DVSI-------SSTG 224
               + F D +    E  + YH  +  D  +  G WY         V I       SS G
Sbjct: 130 GGGKKSFRDMLGATWESRIKYHHSYLFDRGIIPGMWYRSNGSGLVPVEIFIPPEVKSSLG 189

Query: 225 ---------------PLLEKRVDLLQRAEVHVCAFDIETTKLPLKFPDADYDIIMMISYM 269
                          PL +  +  L+R  + V  +  +  K+P    +A Y++I +    
Sbjct: 190 KVFKQEHAKVAEEWMPLFQAPIPHLRRVAIDVEVYTPQENKIP-DPKEALYEVISVAVVG 248

Query: 270 LDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNVNNEIELLRLWFAHMQEVKPGIY 329
            DG   + + +    E   DL Y  +P++E +F     ++E +L+R     +  V+  + 
Sbjct: 249 SDGLKRVFVLKRPGAE--ADLRY--RPDYEVFF----FDSEYDLIREVLKVI--VQYPVV 298

Query: 330 VTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDKNQGECRAKFACHLDCFAWVKRDSY-- 387
           +T+NGD FD P+L  RA   G    EEL     ++          H+D F +    +   
Sbjct: 299 ITFNGDNFDLPYLYNRALALGIP-KEELPIAAKRDYVSVVP--GIHIDLFKFFAIKAVEA 355

Query: 388 -----LPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQMMASYSVSDAVATYYLYM 442
                + +G +GL  +  A LG   +E         +K     +A Y+  DA+ T Y  +
Sbjct: 356 YAFGGVYRGERGLDGIAYAILGVGKVERQKN----VSKMGYWELAEYNYRDALITLYFTL 411

Query: 443 ---TYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVICPNKHQSDPEK-- 497
                V   I  ++ I  M  +++ R         +L  +  +   + PNK     EK  
Sbjct: 412 YNNELVMKLILLMSRIAKMPIEDITRSQVSAWIRNMLYYEHRRRGWLIPNKEDILAEKGQ 471

Query: 498 FYRNHLLESETYIGGHVECLESGVF 522
            Y   +++ + Y G  V     GVF
Sbjct: 472 VYTKAIIKGKKYAGAVVLDPPLGVF 496


>gi|424660357|ref|ZP_18097604.1| DNA polymerase II [Vibrio cholerae HE-16]
 gi|408050638|gb|EKG85792.1| DNA polymerase II [Vibrio cholerae HE-16]
          Length = 787

 Score = 58.2 bits (139), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 54/202 (26%), Positives = 85/202 (42%), Gaps = 25/202 (12%)

Query: 777 AHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIG-KPLELDTDGIW 835
           A K I+NSFYG +   G R++   +A  +T  G +I+   + LIE  G + +  DTD  +
Sbjct: 494 AIKIIMNSFYGVLGSSGCRFFDARLASSITMRGHEIMIQTKRLIEARGYQVIYGDTDSTF 553

Query: 836 CVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSE 895
             L G + +    +  D              N+  A     +Q+ T  + + + Y   S 
Sbjct: 554 VALGGQYSQ----QEAD--------------NIGHALVREINQWWT--EHLKQEYALTSI 593

Query: 896 CSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAEL--KGFEIKRRGELKLIKV 953
             +E+E    Y+  ++P  +      KKRYA    DG   +L  KG E  R     L + 
Sbjct: 594 LELEYETH--YRRFLMPTIRGSETGSKKRYAGLKGDGDNEQLIFKGLESARTDWTPLAQR 651

Query: 954 FQAELFDKFLHGSTIEECYSAV 975
           FQ +L+    HG   E     V
Sbjct: 652 FQHQLYQLIFHGQDPESYIRTV 673


>gi|429885665|ref|ZP_19367244.1| DNA polymerase II [Vibrio cholerae PS15]
 gi|429227471|gb|EKY33484.1| DNA polymerase II [Vibrio cholerae PS15]
          Length = 787

 Score = 58.2 bits (139), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 53/196 (27%), Positives = 84/196 (42%), Gaps = 25/196 (12%)

Query: 777 AHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIG-KPLELDTDGIW 835
           A K I+NSFYG +   G R++   +A  +T  G +I+   + LIE  G + +  DTD  +
Sbjct: 494 AIKIIMNSFYGVLGSSGCRFFDARLASSITMRGHEIMIQTKQLIEARGYQVIYGDTDSTF 553

Query: 836 CVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSE 895
             L G + +    +  D              N+  A     +Q+ T  + + + Y   S 
Sbjct: 554 VALGGQYSQ----QEAD--------------NIGHALVREINQWWT--EHLKQEYALTSI 593

Query: 896 CSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAEL--KGFEIKRRGELKLIKV 953
             +E+E    Y+  ++P  +      KKRYA    DG   +L  KG E  R     L + 
Sbjct: 594 LELEYETH--YRRFLMPTIRGSETGSKKRYAGLKGDGDNEQLIFKGLESARTDWTPLAQR 651

Query: 954 FQAELFDKFLHGSTIE 969
           FQ +L+    HG   E
Sbjct: 652 FQHQLYQLIFHGQDPE 667


>gi|391331432|ref|XP_003740150.1| PREDICTED: DNA polymerase alpha catalytic subunit-like [Metaseiulus
            occidentalis]
          Length = 1500

 Score = 58.2 bits (139), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 80/300 (26%), Positives = 132/300 (44%), Gaps = 55/300 (18%)

Query: 771  YDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLEL- 829
            YD  Q A K   NS YG +  +G+R+Y+  +A ++T  G  I+ +A+ + E +G  +   
Sbjct: 963  YDIRQKALKLTANSMYGCLGFQGSRFYAKPIAALITQRGRDILMSAKSMAESMGYSIIYG 1022

Query: 830  DTDGIWCVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKT 889
            DTD I      +   +   + K++ KKL+ +               NDQY+ L       
Sbjct: 1023 DTDSIMI---NTCTRDIA-QVKEIGKKLSKA--------------INDQYKRL------- 1057

Query: 890  YETHSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLA----ELKGFEIKRR 945
                     E EVDG +K+M       +          F  DG+LA    E+KG +I RR
Sbjct: 1058 ---------EIEVDGVFKSM----LLLKKKKYAAHTLTFLPDGSLAGGKIEVKGLDIVRR 1104

Query: 946  GELKLIKVFQAELFDKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELI--DYIS 1003
               +L +     + D  L G    +   AV AV     D L   GK + D+ L   DY+ 
Sbjct: 1105 DWSELARKTGRFVVDTLLKGELSAD--DAVDAVH----DHLREVGKKVNDNALPFEDYVI 1158

Query: 1004 ESSTMSKSLADYGEQKSCA-VTTARRLSDFLGDTMVKDKGLRCQYIVACEPQGTPVSERA 1062
             +  ++K++ DY + K+ + V  A+R  +  G   ++  G   QY++  +    P ++RA
Sbjct: 1159 -TKQLTKNVEDYPDAKNQSHVLVAKRF-NARGAKKLR-AGDTVQYVICEDGTENPHTQRA 1215


>gi|153820204|ref|ZP_01972871.1| DNA polymerase II, partial [Vibrio cholerae NCTC 8457]
 gi|126509251|gb|EAZ71845.1| DNA polymerase II [Vibrio cholerae NCTC 8457]
          Length = 780

 Score = 58.2 bits (139), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 53/196 (27%), Positives = 84/196 (42%), Gaps = 25/196 (12%)

Query: 777 AHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIG-KPLELDTDGIW 835
           A K I+NSFYG +   G R++   +A  +T  G +I+   + LIE  G + +  DTD  +
Sbjct: 487 AIKIIMNSFYGVLGSSGCRFFDARLASSITMRGHEIMIQTKRLIEARGYQVIYGDTDSTF 546

Query: 836 CVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSE 895
             L G + +    +  D              N+  A     +Q+ T  + + + Y   S 
Sbjct: 547 VALGGQYSQ----QEAD--------------NIGHALVREINQWWT--EHLKQEYALTSI 586

Query: 896 CSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAEL--KGFEIKRRGELKLIKV 953
             +E+E    Y+  ++P  +      KKRYA    DG   +L  KG E  R     L + 
Sbjct: 587 LELEYETH--YRRFLMPTIRGSETGSKKRYAGLKGDGDNEQLIFKGLESARTDWTPLAQR 644

Query: 954 FQAELFDKFLHGSTIE 969
           FQ +L+    HG   E
Sbjct: 645 FQHQLYQLIFHGQDPE 660


>gi|421320830|ref|ZP_15771387.1| DNA polymerase II [Vibrio cholerae CP1038(11)]
 gi|395923812|gb|EJH34623.1| DNA polymerase II [Vibrio cholerae CP1038(11)]
          Length = 772

 Score = 58.2 bits (139), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 53/196 (27%), Positives = 84/196 (42%), Gaps = 25/196 (12%)

Query: 777 AHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIG-KPLELDTDGIW 835
           A K I+NSFYG +   G R++   +A  +T  G +I+   + LIE  G + +  DTD  +
Sbjct: 479 AIKIIMNSFYGVLGSSGCRFFDARLASSITMRGHEIMIQTKRLIEARGYQVIYGDTDSTF 538

Query: 836 CVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSE 895
             L G + +    +  D              N+  A     +Q+ T  + + + Y   S 
Sbjct: 539 VALGGQYSQ----QEAD--------------NIGHALVREINQWWT--EHLKQEYALTSI 578

Query: 896 CSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAEL--KGFEIKRRGELKLIKV 953
             +E+E    Y+  ++P  +      KKRYA    DG   +L  KG E  R     L + 
Sbjct: 579 LELEYETH--YRRFLMPTIRGSETGSKKRYAGLKGDGDNEQLIFKGLESARTDWTPLAQR 636

Query: 954 FQAELFDKFLHGSTIE 969
           FQ +L+    HG   E
Sbjct: 637 FQHQLYQLIFHGQDPE 652


>gi|381405710|ref|ZP_09930394.1| DNA polymerase II [Pantoea sp. Sc1]
 gi|380738909|gb|EIB99972.1| DNA polymerase II [Pantoea sp. Sc1]
          Length = 784

 Score = 58.2 bits (139), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 81/355 (22%), Positives = 130/355 (36%), Gaps = 68/355 (19%)

Query: 725  VDTVRSFRDRRYEYKG------LNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAH 778
             D+V  FR+ R+          + ++W G+   AK   N                L  A 
Sbjct: 448  ADSVAGFREARFSRHTHCLPAMVEQIWLGR-EAAKKQNNQ--------------PLSQAL 492

Query: 779  KCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIG-KPLELDTDGIWCV 837
            K I+N+FYG +     R++   +A  +T  G  I+Q  R LIE  G   +  DTD  +  
Sbjct: 493  KIIMNAFYGVLGTSACRFFDPRLASSITLRGHAIMQQTRALIEAEGYDVIYGDTDSTFVW 552

Query: 838  LPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECS 897
            L  +          D ++   I +  V   V+    +   Q   L   +   YE H    
Sbjct: 553  LKSA---------HDEEQAAAIGHQLVQ-KVNAWWRDHLQQTLGLTSALELEYENH---- 598

Query: 898  IEFEVDGPYKAMILPASKEEGILIKKRYA--VFNDDGTLAELKGFEIKRRGELKLIKVFQ 955
                    +   ++P  +      KKRYA  + + DG     KG E  R     L K FQ
Sbjct: 599  --------FCRFLMPTIRGAEQGSKKRYAGLIRDADGARMVFKGLESVRTDWTPLAKTFQ 650

Query: 956  AELFDKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLADY 1015
             +L+ +  H                 W D +      +   EL D +     + + L +Y
Sbjct: 651  QQLYHRIFHREP--------------WQDYIRETVAQLLAGELDDQLIYKKRLRRPLKEY 696

Query: 1016 GEQKSCAVTTARRLSD----FLGDTMVKDKGLRCQYIVACE-PQGTPVSERAVPV 1065
             E+       A RL+D     L   +    G R +Y++A   P+  P+  R+ P+
Sbjct: 697  -ERNVPPHVRAARLADEQNRKLNRPLQYQNGGRIRYVMATAGPE--PLEARSTPL 748


>gi|374325923|ref|YP_005084123.1| DNA polymerase I [Pyrobaculum sp. 1860]
 gi|356641192|gb|AET31871.1| DNA polymerase I [Pyrobaculum sp. 1860]
          Length = 855

 Score = 58.2 bits (139), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 84/342 (24%), Positives = 141/342 (41%), Gaps = 56/342 (16%)

Query: 188 DCIVDLREYDVPYHIRFAIDNDVRCGQWY----------DVSISST-------------G 224
           D + +  E  + YH  +  D +V  G WY          ++SI +              G
Sbjct: 140 DILKETWESRIKYHHSYLFDRNVIPGMWYRSNGGGLTPIEISIPTEVKFSLANIFKQEHG 199

Query: 225 PLLEKRVDLLQRAEVHV--CAFDIET-TKLPLKFPD---ADYDIIMMISYMLDGQGYLII 278
            + E+ + L Q    H+   A D+E  T    K PD   A+Y+II +     DG   +++
Sbjct: 200 KVAEEWIPLFQAPIPHIKRVAIDVEVYTPQENKIPDPKSAEYEIISVALVGSDGLRRVLM 259

Query: 279 NRECVGEDIEDLEYTPKPEFEGYFKVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFD 338
            R   G D E L Y  +P++E  F     ++E +LL   F  +  V+  I +T+NGD FD
Sbjct: 260 LRRP-GRDAE-LRY--RPDYEILF----FDSEYDLLMEVFKTI--VQYPIVITFNGDNFD 309

Query: 339 WPFLETRAAHHGFKMSEELGFQCDKNQGECRAKFACHLDCFAWVKRDSY-------LPQG 391
            P+L  RA   G    E+L     ++          H+D F +    +        + +G
Sbjct: 310 LPYLYNRAIALGIP-KEDLPIAAKRDY--VSVAPGVHIDMFKFFAIKAIEAYAFGGVYRG 366

Query: 392 SQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQMMASYSVSDAVATYYLYM---TYVHPF 448
            +GL  +  A LG   +E   +++ R    +   +A Y+  DA+ T Y  +     V   
Sbjct: 367 ERGLDGIAYAILGVGKVE-RQKNVSRMGYWE---LAEYNYRDALITLYFTLYNNEMVMKL 422

Query: 449 IFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVICPNK 490
           I  L+ I  M  +++ R         +L  +  +   + PNK
Sbjct: 423 IILLSRIAKMPIEDITRSQVSAWIRNMLYYEHRRRGWLIPNK 464


>gi|417824281|ref|ZP_12470872.1| DNA polymerase II [Vibrio cholerae HE48]
 gi|340047966|gb|EGR08889.1| DNA polymerase II [Vibrio cholerae HE48]
          Length = 787

 Score = 58.2 bits (139), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 53/196 (27%), Positives = 84/196 (42%), Gaps = 25/196 (12%)

Query: 777 AHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIG-KPLELDTDGIW 835
           A K I+NSFYG +   G R++   +A  +T  G +I+   + LIE  G + +  DTD  +
Sbjct: 494 AIKIIMNSFYGVLGSSGCRFFDARLASSITMRGHEIMIQTKQLIEARGYQVIYGDTDSTF 553

Query: 836 CVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSE 895
             L G + +    +  D              N+  A     +Q+ T  + + + Y   S 
Sbjct: 554 VALGGQYSQ----QEAD--------------NIGHALVREINQWWT--EHLKQEYALTSI 593

Query: 896 CSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAEL--KGFEIKRRGELKLIKV 953
             +E+E    Y+  ++P  +      KKRYA    DG   +L  KG E  R     L + 
Sbjct: 594 LELEYETH--YRRFLMPTIRGSETGSKKRYAGLKGDGDNEQLIFKGLESARTDWTPLAQR 651

Query: 954 FQAELFDKFLHGSTIE 969
           FQ +L+    HG   E
Sbjct: 652 FQHQLYQLIFHGQDPE 667


>gi|390353241|ref|XP_003728069.1| PREDICTED: DNA polymerase alpha catalytic subunit-like isoform 2
            [Strongylocentrotus purpuratus]
          Length = 1480

 Score = 58.2 bits (139), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 77/307 (25%), Positives = 127/307 (41%), Gaps = 60/307 (19%)

Query: 766  DMVVLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIG- 824
            D+ + YD  Q A K   NS YG +    +R+Y+  +A +VT  G +I+ + + L++K+  
Sbjct: 959  DIRLQYDIRQKALKLTANSMYGCLGFSHSRFYAKPLAALVTSKGREILMHTKELVQKMNL 1018

Query: 825  KPLELDTDGIWCVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVD 884
              +  DTD I                              M+N +   ++T  +    V 
Sbjct: 1019 DVIYGDTDSI------------------------------MINTNSTDHDTVFKLGNRVK 1048

Query: 885  P-VSKTYETHSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFN----DDGTL---AE 936
              V+K Y       +E ++DG +++M+L        L KK+YA        DGTL    E
Sbjct: 1049 TEVNKLYRL-----LEIDIDGVFQSMLL--------LKKKKYAAITVERLPDGTLKTSKE 1095

Query: 937  LKGFEIKRRGELKLIKVFQAELFDKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADS 996
            +KG +I RR    L K   +   D+ L   + E        V N    L++   K  A +
Sbjct: 1096 MKGLDIVRRDWCDLAKKVGSYAIDQILSADSRE------VIVDNIHSHLVELGEKVAAGT 1149

Query: 997  ELIDYISESSTMSKSLADYGEQKSCA-VTTARRLSDFLGDTMVKDKGLRCQYIVACEPQG 1055
              +D    +  ++K+  DY ++KS   V  A RL+   G   +   G    YI+  +   
Sbjct: 1150 IPLDQYEINKGLTKAPQDYPDKKSLPHVNVALRLNSQGGGKPI-GAGDTVSYIICVDGSN 1208

Query: 1056 TPVSERA 1062
             P  +RA
Sbjct: 1209 LPAGQRA 1215


>gi|390353239|ref|XP_003728068.1| PREDICTED: DNA polymerase alpha catalytic subunit-like isoform 1
            [Strongylocentrotus purpuratus]
          Length = 1480

 Score = 58.2 bits (139), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 77/307 (25%), Positives = 127/307 (41%), Gaps = 60/307 (19%)

Query: 766  DMVVLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIG- 824
            D+ + YD  Q A K   NS YG +    +R+Y+  +A +VT  G +I+ + + L++K+  
Sbjct: 959  DIRLQYDIRQKALKLTANSMYGCLGFSHSRFYAKPLAALVTSKGREILMHTKELVQKMNL 1018

Query: 825  KPLELDTDGIWCVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVD 884
              +  DTD I                              M+N +   ++T  +    V 
Sbjct: 1019 DVIYGDTDSI------------------------------MINTNSTDHDTVFKLGNRVK 1048

Query: 885  P-VSKTYETHSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFN----DDGTL---AE 936
              V+K Y       +E ++DG +++M+L        L KK+YA        DGTL    E
Sbjct: 1049 TEVNKLYRL-----LEIDIDGVFQSMLL--------LKKKKYAAITVERLPDGTLKTSKE 1095

Query: 937  LKGFEIKRRGELKLIKVFQAELFDKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADS 996
            +KG +I RR    L K   +   D+ L   + E        V N    L++   K  A +
Sbjct: 1096 MKGLDIVRRDWCDLAKKVGSYAIDQILSADSRE------VIVDNIHSHLVELGEKVAAGT 1149

Query: 997  ELIDYISESSTMSKSLADYGEQKSCA-VTTARRLSDFLGDTMVKDKGLRCQYIVACEPQG 1055
              +D    +  ++K+  DY ++KS   V  A RL+   G   +   G    YI+  +   
Sbjct: 1150 IPLDQYEINKGLTKAPQDYPDKKSLPHVNVALRLNSQGGGKPI-GAGDTVSYIICVDGSN 1208

Query: 1056 TPVSERA 1062
             P  +RA
Sbjct: 1209 LPAGQRA 1215


>gi|15641225|ref|NP_230857.1| DNA polymerase II [Vibrio cholerae O1 biovar El Tor str. N16961]
 gi|121591586|ref|ZP_01678840.1| DNA polymerase II [Vibrio cholerae 2740-80]
 gi|121729878|ref|ZP_01682306.1| DNA polymerase II [Vibrio cholerae V52]
 gi|227081384|ref|YP_002809935.1| DNA polymerase II [Vibrio cholerae M66-2]
 gi|229505195|ref|ZP_04394705.1| DNA polymerase II [Vibrio cholerae BX 330286]
 gi|229511135|ref|ZP_04400614.1| DNA polymerase II [Vibrio cholerae B33]
 gi|229518254|ref|ZP_04407698.1| DNA polymerase II [Vibrio cholerae RC9]
 gi|229608214|ref|YP_002878862.1| DNA polymerase II [Vibrio cholerae MJ-1236]
 gi|254848337|ref|ZP_05237687.1| DNA polymerase II [Vibrio cholerae MO10]
 gi|255745616|ref|ZP_05419564.1| DNA polymerase II [Vibrio cholera CIRS 101]
 gi|262159109|ref|ZP_06030221.1| DNA polymerase II [Vibrio cholerae INDRE 91/1]
 gi|298498688|ref|ZP_07008495.1| DNA polymerase II [Vibrio cholerae MAK 757]
 gi|360035115|ref|YP_004936878.1| DNA polymerase II [Vibrio cholerae O1 str. 2010EL-1786]
 gi|379741031|ref|YP_005333000.1| DNA polymerase II [Vibrio cholerae IEC224]
 gi|417813238|ref|ZP_12459895.1| DNA polymerase II [Vibrio cholerae HC-49A2]
 gi|417816104|ref|ZP_12462736.1| DNA polymerase II [Vibrio cholerae HCUF01]
 gi|418332251|ref|ZP_12943186.1| DNA polymerase II [Vibrio cholerae HC-06A1]
 gi|418336994|ref|ZP_12945892.1| DNA polymerase II [Vibrio cholerae HC-23A1]
 gi|418343507|ref|ZP_12950294.1| DNA polymerase II [Vibrio cholerae HC-28A1]
 gi|418348663|ref|ZP_12953397.1| DNA polymerase II [Vibrio cholerae HC-43A1]
 gi|418354882|ref|ZP_12957603.1| DNA polymerase II [Vibrio cholerae HC-61A1]
 gi|419825710|ref|ZP_14349214.1| DNA polymerase B family protein [Vibrio cholerae CP1033(6)]
 gi|421316588|ref|ZP_15767159.1| DNA polymerase II [Vibrio cholerae CP1032(5)]
 gi|421324824|ref|ZP_15775350.1| DNA polymerase II [Vibrio cholerae CP1041(14)]
 gi|421328485|ref|ZP_15778999.1| DNA polymerase II [Vibrio cholerae CP1042(15)]
 gi|421331505|ref|ZP_15781985.1| DNA polymerase II [Vibrio cholerae CP1046(19)]
 gi|421335079|ref|ZP_15785546.1| DNA polymerase II [Vibrio cholerae CP1048(21)]
 gi|421338974|ref|ZP_15789409.1| DNA polymerase II [Vibrio cholerae HC-20A2]
 gi|421346751|ref|ZP_15797133.1| DNA polymerase II [Vibrio cholerae HC-46A1]
 gi|422891325|ref|ZP_16933705.1| DNA polymerase II [Vibrio cholerae HC-40A1]
 gi|422902535|ref|ZP_16937535.1| DNA polymerase II [Vibrio cholerae HC-48A1]
 gi|422906415|ref|ZP_16941247.1| DNA polymerase II [Vibrio cholerae HC-70A1]
 gi|422913001|ref|ZP_16947520.1| DNA polymerase II [Vibrio cholerae HFU-02]
 gi|422925482|ref|ZP_16958507.1| DNA polymerase II [Vibrio cholerae HC-38A1]
 gi|423144803|ref|ZP_17132412.1| DNA polymerase II [Vibrio cholerae HC-19A1]
 gi|423149481|ref|ZP_17136809.1| DNA polymerase II [Vibrio cholerae HC-21A1]
 gi|423153297|ref|ZP_17140491.1| DNA polymerase II [Vibrio cholerae HC-22A1]
 gi|423156109|ref|ZP_17143213.1| DNA polymerase II [Vibrio cholerae HC-32A1]
 gi|423159938|ref|ZP_17146906.1| DNA polymerase II [Vibrio cholerae HC-33A2]
 gi|423164654|ref|ZP_17151412.1| DNA polymerase II [Vibrio cholerae HC-48B2]
 gi|423730782|ref|ZP_17704096.1| DNA polymerase B family protein [Vibrio cholerae HC-17A1]
 gi|423753623|ref|ZP_17712104.1| DNA polymerase B family protein [Vibrio cholerae HC-50A2]
 gi|423892477|ref|ZP_17726160.1| DNA polymerase B family protein [Vibrio cholerae HC-62A1]
 gi|423927253|ref|ZP_17730775.1| DNA polymerase B family protein [Vibrio cholerae HC-77A1]
 gi|424001797|ref|ZP_17744883.1| DNA polymerase II [Vibrio cholerae HC-17A2]
 gi|424005957|ref|ZP_17748937.1| DNA polymerase II [Vibrio cholerae HC-37A1]
 gi|424023976|ref|ZP_17763636.1| DNA polymerase II [Vibrio cholerae HC-62B1]
 gi|424026766|ref|ZP_17766379.1| DNA polymerase II [Vibrio cholerae HC-69A1]
 gi|424586099|ref|ZP_18025689.1| DNA polymerase II [Vibrio cholerae CP1030(3)]
 gi|424590450|ref|ZP_18029887.1| DNA polymerase II [Vibrio cholerae CP1037(10)]
 gi|424594797|ref|ZP_18034130.1| DNA polymerase II [Vibrio cholerae CP1040(13)]
 gi|424598664|ref|ZP_18037858.1| DNA polymerase II [Vibrio Cholerae CP1044(17)]
 gi|424601406|ref|ZP_18040559.1| DNA polymerase II [Vibrio cholerae CP1047(20)]
 gi|424606393|ref|ZP_18045353.1| DNA polymerase II [Vibrio cholerae CP1050(23)]
 gi|424613032|ref|ZP_18051835.1| DNA polymerase II [Vibrio cholerae HC-41A1]
 gi|424616847|ref|ZP_18055534.1| DNA polymerase II [Vibrio cholerae HC-42A1]
 gi|424621797|ref|ZP_18060320.1| DNA polymerase II [Vibrio cholerae HC-47A1]
 gi|424644773|ref|ZP_18082521.1| DNA polymerase II [Vibrio cholerae HC-56A2]
 gi|424652450|ref|ZP_18089926.1| DNA polymerase II [Vibrio cholerae HC-57A2]
 gi|424656353|ref|ZP_18093651.1| DNA polymerase II [Vibrio cholerae HC-81A2]
 gi|440709479|ref|ZP_20890136.1| DNA polymerase II [Vibrio cholerae 4260B]
 gi|443503303|ref|ZP_21070285.1| DNA polymerase II [Vibrio cholerae HC-64A1]
 gi|443507211|ref|ZP_21073995.1| DNA polymerase II [Vibrio cholerae HC-65A1]
 gi|443511330|ref|ZP_21077986.1| DNA polymerase II [Vibrio cholerae HC-67A1]
 gi|443514889|ref|ZP_21081419.1| DNA polymerase II [Vibrio cholerae HC-68A1]
 gi|443518691|ref|ZP_21085101.1| DNA polymerase II [Vibrio cholerae HC-71A1]
 gi|443523578|ref|ZP_21089807.1| DNA polymerase II [Vibrio cholerae HC-72A2]
 gi|443531192|ref|ZP_21097207.1| DNA polymerase II [Vibrio cholerae HC-7A1]
 gi|443534968|ref|ZP_21100863.1| DNA polymerase II [Vibrio cholerae HC-80A1]
 gi|443538534|ref|ZP_21104389.1| DNA polymerase II [Vibrio cholerae HC-81A1]
 gi|449056290|ref|ZP_21734958.1| DNA polymerase II [Vibrio cholerae O1 str. Inaba G4222]
 gi|9655692|gb|AAF94371.1| DNA polymerase II [Vibrio cholerae O1 biovar El Tor str. N16961]
 gi|121546560|gb|EAX56761.1| DNA polymerase II [Vibrio cholerae 2740-80]
 gi|121628387|gb|EAX60887.1| DNA polymerase II [Vibrio cholerae V52]
 gi|227009272|gb|ACP05484.1| DNA polymerase II [Vibrio cholerae M66-2]
 gi|229344969|gb|EEO09943.1| DNA polymerase II [Vibrio cholerae RC9]
 gi|229351100|gb|EEO16041.1| DNA polymerase II [Vibrio cholerae B33]
 gi|229357418|gb|EEO22335.1| DNA polymerase II [Vibrio cholerae BX 330286]
 gi|229370869|gb|ACQ61292.1| DNA polymerase II [Vibrio cholerae MJ-1236]
 gi|254844042|gb|EET22456.1| DNA polymerase II [Vibrio cholerae MO10]
 gi|255736691|gb|EET92088.1| DNA polymerase II [Vibrio cholera CIRS 101]
 gi|262029294|gb|EEY47946.1| DNA polymerase II [Vibrio cholerae INDRE 91/1]
 gi|297543021|gb|EFH79071.1| DNA polymerase II [Vibrio cholerae MAK 757]
 gi|340041830|gb|EGR02796.1| DNA polymerase II [Vibrio cholerae HCUF01]
 gi|340042542|gb|EGR03507.1| DNA polymerase II [Vibrio cholerae HC-49A2]
 gi|341623743|gb|EGS49264.1| DNA polymerase II [Vibrio cholerae HC-70A1]
 gi|341623759|gb|EGS49279.1| DNA polymerase II [Vibrio cholerae HC-48A1]
 gi|341624818|gb|EGS50300.1| DNA polymerase II [Vibrio cholerae HC-40A1]
 gi|341639826|gb|EGS64437.1| DNA polymerase II [Vibrio cholerae HFU-02]
 gi|341647795|gb|EGS71872.1| DNA polymerase II [Vibrio cholerae HC-38A1]
 gi|356419309|gb|EHH72862.1| DNA polymerase II [Vibrio cholerae HC-06A1]
 gi|356419913|gb|EHH73445.1| DNA polymerase II [Vibrio cholerae HC-21A1]
 gi|356425122|gb|EHH78507.1| DNA polymerase II [Vibrio cholerae HC-19A1]
 gi|356432097|gb|EHH85296.1| DNA polymerase II [Vibrio cholerae HC-22A1]
 gi|356432572|gb|EHH85769.1| DNA polymerase II [Vibrio cholerae HC-23A1]
 gi|356436395|gb|EHH89510.1| DNA polymerase II [Vibrio cholerae HC-28A1]
 gi|356442040|gb|EHH94910.1| DNA polymerase II [Vibrio cholerae HC-32A1]
 gi|356447402|gb|EHI00193.1| DNA polymerase II [Vibrio cholerae HC-43A1]
 gi|356449054|gb|EHI01814.1| DNA polymerase II [Vibrio cholerae HC-33A2]
 gi|356453284|gb|EHI05947.1| DNA polymerase II [Vibrio cholerae HC-61A1]
 gi|356455668|gb|EHI08308.1| DNA polymerase II [Vibrio cholerae HC-48B2]
 gi|356646269|gb|AET26324.1| DNA polymerase II [Vibrio cholerae O1 str. 2010EL-1786]
 gi|378794541|gb|AFC58012.1| DNA polymerase II [Vibrio cholerae IEC224]
 gi|395920494|gb|EJH31316.1| DNA polymerase II [Vibrio cholerae CP1041(14)]
 gi|395921545|gb|EJH32365.1| DNA polymerase II [Vibrio cholerae CP1032(5)]
 gi|395929991|gb|EJH40740.1| DNA polymerase II [Vibrio cholerae CP1042(15)]
 gi|395932769|gb|EJH43512.1| DNA polymerase II [Vibrio cholerae CP1046(19)]
 gi|395936940|gb|EJH47663.1| DNA polymerase II [Vibrio cholerae CP1048(21)]
 gi|395943922|gb|EJH54596.1| DNA polymerase II [Vibrio cholerae HC-20A2]
 gi|395945811|gb|EJH56475.1| DNA polymerase II [Vibrio cholerae HC-46A1]
 gi|395960809|gb|EJH71167.1| DNA polymerase II [Vibrio cholerae HC-56A2]
 gi|395962065|gb|EJH72372.1| DNA polymerase II [Vibrio cholerae HC-57A2]
 gi|395965098|gb|EJH75282.1| DNA polymerase II [Vibrio cholerae HC-42A1]
 gi|395972590|gb|EJH82179.1| DNA polymerase II [Vibrio cholerae HC-47A1]
 gi|395976152|gb|EJH85610.1| DNA polymerase II [Vibrio cholerae CP1030(3)]
 gi|395977788|gb|EJH87186.1| DNA polymerase II [Vibrio cholerae CP1047(20)]
 gi|408014971|gb|EKG52583.1| DNA polymerase II [Vibrio cholerae HC-41A1]
 gi|408034615|gb|EKG71108.1| DNA polymerase II [Vibrio cholerae CP1037(10)]
 gi|408035203|gb|EKG71679.1| DNA polymerase II [Vibrio cholerae CP1040(13)]
 gi|408043790|gb|EKG79764.1| DNA polymerase II [Vibrio Cholerae CP1044(17)]
 gi|408045168|gb|EKG81032.1| DNA polymerase II [Vibrio cholerae CP1050(23)]
 gi|408055800|gb|EKG90711.1| DNA polymerase II [Vibrio cholerae HC-81A2]
 gi|408609791|gb|EKK83167.1| DNA polymerase B family protein [Vibrio cholerae CP1033(6)]
 gi|408625776|gb|EKK98679.1| DNA polymerase B family protein [Vibrio cholerae HC-17A1]
 gi|408638753|gb|EKL10634.1| DNA polymerase B family protein [Vibrio cholerae HC-50A2]
 gi|408657164|gb|EKL28255.1| DNA polymerase B family protein [Vibrio cholerae HC-77A1]
 gi|408658021|gb|EKL29095.1| DNA polymerase B family protein [Vibrio cholerae HC-62A1]
 gi|408847356|gb|EKL87427.1| DNA polymerase II [Vibrio cholerae HC-37A1]
 gi|408848545|gb|EKL88593.1| DNA polymerase II [Vibrio cholerae HC-17A2]
 gi|408871731|gb|EKM10962.1| DNA polymerase II [Vibrio cholerae HC-62B1]
 gi|408880547|gb|EKM19472.1| DNA polymerase II [Vibrio cholerae HC-69A1]
 gi|439975068|gb|ELP51204.1| DNA polymerase II [Vibrio cholerae 4260B]
 gi|443432614|gb|ELS75142.1| DNA polymerase II [Vibrio cholerae HC-64A1]
 gi|443436244|gb|ELS82367.1| DNA polymerase II [Vibrio cholerae HC-65A1]
 gi|443439750|gb|ELS89447.1| DNA polymerase II [Vibrio cholerae HC-67A1]
 gi|443443854|gb|ELS97137.1| DNA polymerase II [Vibrio cholerae HC-68A1]
 gi|443447740|gb|ELT04382.1| DNA polymerase II [Vibrio cholerae HC-71A1]
 gi|443450678|gb|ELT10953.1| DNA polymerase II [Vibrio cholerae HC-72A2]
 gi|443458275|gb|ELT25671.1| DNA polymerase II [Vibrio cholerae HC-7A1]
 gi|443461830|gb|ELT32886.1| DNA polymerase II [Vibrio cholerae HC-80A1]
 gi|443466123|gb|ELT40782.1| DNA polymerase II [Vibrio cholerae HC-81A1]
 gi|448264113|gb|EMB01352.1| DNA polymerase II [Vibrio cholerae O1 str. Inaba G4222]
          Length = 787

 Score = 58.2 bits (139), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 53/196 (27%), Positives = 84/196 (42%), Gaps = 25/196 (12%)

Query: 777 AHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIG-KPLELDTDGIW 835
           A K I+NSFYG +   G R++   +A  +T  G +I+   + LIE  G + +  DTD  +
Sbjct: 494 AIKIIMNSFYGVLGSSGCRFFDARLASSITMRGHEIMIQTKRLIEARGYQVIYGDTDSTF 553

Query: 836 CVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSE 895
             L G + +    +  D              N+  A     +Q+ T  + + + Y   S 
Sbjct: 554 VALGGQYSQ----QEAD--------------NIGHALVREINQWWT--EHLKQEYALTSI 593

Query: 896 CSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAEL--KGFEIKRRGELKLIKV 953
             +E+E    Y+  ++P  +      KKRYA    DG   +L  KG E  R     L + 
Sbjct: 594 LELEYETH--YRRFLMPTIRGSETGSKKRYAGLKGDGDNEQLIFKGLESARTDWTPLAQR 651

Query: 954 FQAELFDKFLHGSTIE 969
           FQ +L+    HG   E
Sbjct: 652 FQHQLYQLIFHGQDPE 667


>gi|409201968|ref|ZP_11230171.1| DNA polymerase II [Pseudoalteromonas flavipulchra JG1]
          Length = 778

 Score = 58.2 bits (139), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 53/200 (26%), Positives = 87/200 (43%), Gaps = 35/200 (17%)

Query: 774 LQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIG-KPLELDTD 832
           L  A K I+NS YG +  KG R+Y   +A  +T  G +I+Q  R  IE++G + +  DTD
Sbjct: 485 LSQAIKIIMNSLYGVLGSKGCRFYDPRLASSITMRGHQIMQQTRTWIEQLGYEVIYGDTD 544

Query: 833 GIWCVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYET 892
             +  LP S         + + K+L I                N++++ L   +++++  
Sbjct: 545 STFVCLPESLRSE---ACQAIGKQLMI--------------EINERWRVL---LTESFGL 584

Query: 893 HSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAEL-------KGFEIKRR 945
           HS   IEFE    Y    +P  + + +  KKRY      G + +L       KG E  R 
Sbjct: 585 HSYLEIEFETH--YSPFFMPTIRGQEVGSKKRYV-----GQITDLGEQKLVFKGMETVRS 637

Query: 946 GELKLIKVFQAELFDKFLHG 965
              ++ K +Q  +      G
Sbjct: 638 DWTEIAKEYQQAIIRALFDG 657


>gi|163803037|ref|ZP_02196923.1| DNA polymerase II [Vibrio sp. AND4]
 gi|159173211|gb|EDP58040.1| DNA polymerase II [Vibrio sp. AND4]
          Length = 787

 Score = 57.8 bits (138), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 63/282 (22%), Positives = 107/282 (37%), Gaps = 44/282 (15%)

Query: 777  AHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIG-KPLELDTDGIW 835
            A K I+NSFYG +   G R++   +A  +T  G +I++  ++LIE  G + +  DTD  +
Sbjct: 494  AIKIIMNSFYGVLGSSGCRFFDTRLASSITMRGHEIMKQTKVLIEDKGYQVIYGDTDSTF 553

Query: 836  CVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQY-QTLVDPVSKTYETHS 894
              L G+F +                      + D   N   D   Q   + + + Y  +S
Sbjct: 554  VSLNGAFDQ---------------------ADADKIGNELVDYINQWWCEHLRREYNLNS 592

Query: 895  ECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAEL--KGFEIKRRGELKLIK 952
               +E+E    Y+  ++P  +      KKRYA    +G    +  KG E  R     L +
Sbjct: 593  ILELEYETH--YRKFLMPTIRGAETGSKKRYAGLIGEGEQERIIFKGLESARTDWTPLAQ 650

Query: 953  VFQAELFDKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSL 1012
             FQ  L+    HG    +    +    N              + E  D++     + + L
Sbjct: 651  RFQNTLYQMIFHGEDPSDYVREMVEKTN--------------NGEFDDHLVYQKRLRRKL 696

Query: 1013 ADYGEQKSCAVTTARRLSDF---LGDTMVKDKGLRCQYIVAC 1051
             +Y +     V  AR   D    LG  +      R +Y++  
Sbjct: 697  NEYQKNIPPQVRAARLADDINAKLGRPLQYQNRGRIEYLITL 738


>gi|407462586|ref|YP_006773903.1| DNA polymerase I [Candidatus Nitrosopumilus koreensis AR1]
 gi|407046208|gb|AFS80961.1| DNA polymerase I [Candidatus Nitrosopumilus koreensis AR1]
          Length = 852

 Score = 57.8 bits (138), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 62/231 (26%), Positives = 98/231 (42%), Gaps = 28/231 (12%)

Query: 330 VTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDKNQGECRAKFACHLDCF-AWVKRDSYL 388
           VTYNGD FD P+L  RA   G K SE   +     +     K   HLD +  +  R   +
Sbjct: 288 VTYNGDEFDLPYLYNRAERLGIKNSENPFYMM---RDSATLKHGVHLDLYRTFSNRSFQI 344

Query: 389 PQGSQ-----GLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQMMASYSVSDAVATYYLYMT 443
              SQ      L +V KA LG + ++   E    F +      A+Y  +DA+ TY L  +
Sbjct: 345 YAFSQKYTNFSLNSVCKALLGKEKIDYGLE----FDQLSLYQTANYCYNDALLTYEL-TS 399

Query: 444 YVHPFIFSLATIIP----MSPDEVLRKGSGTLCEMLLMVQAYKANVICPNKHQSD--PEK 497
           + +  +  L  II     M  D++ R G       LL  +  K N + P + + +   E 
Sbjct: 400 FNNELLMQLLIIISRIGRMPIDDIARMGVSQWIRSLLYYEHRKRNYLIPKRQELERRSEG 459

Query: 498 FYRNHLLESETYIGGHVECLESGV--------FRSDLPTSFKLDPSAYEQL 540
              + +++ + Y GG V   + G+        F S  P+  K+   +YE +
Sbjct: 460 VMSDAVIKDKKYRGGLVVEPKEGIHFDVVVMDFASLYPSIIKVRNLSYETV 510


>gi|425071396|ref|ZP_18474502.1| hypothetical protein HMPREF1310_00801 [Proteus mirabilis WGLW4]
 gi|404599203|gb|EKA99663.1| hypothetical protein HMPREF1310_00801 [Proteus mirabilis WGLW4]
          Length = 784

 Score = 57.8 bits (138), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 49/192 (25%), Positives = 82/192 (42%), Gaps = 25/192 (13%)

Query: 774 LQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIG-KPLELDTD 832
           L  A K I+N+FYG +   G R++   +A  +T  G +I++  R LIE  G + +  DTD
Sbjct: 491 LSQALKIIMNAFYGVLGSVGCRFFDPRLASSITLRGHEIMKKTRELIESKGYQVIYGDTD 550

Query: 833 GIWCVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYET 892
             +  L  +  E                    +    + R    D  Q     +++TY+ 
Sbjct: 551 STFVWLKAAHNE--------------------VQAEQIGRQLAQDVNQWWKSYLTETYQL 590

Query: 893 HSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIK 952
            S+  +E+E    Y+  ++P  +      KKRYA  + D  +   KG E  R     L +
Sbjct: 591 DSQLELEYETH--YRRFLMPTIRGMETGSKKRYAGLSHDKMV--FKGLETVRTDWTPLAQ 646

Query: 953 VFQAELFDKFLH 964
            FQ EL+ +  +
Sbjct: 647 AFQKELYTRIFN 658


>gi|359433739|ref|ZP_09224053.1| DNA polymerase II [Pseudoalteromonas sp. BSi20652]
 gi|357919600|dbj|GAA60302.1| DNA polymerase II [Pseudoalteromonas sp. BSi20652]
          Length = 749

 Score = 57.8 bits (138), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 54/195 (27%), Positives = 81/195 (41%), Gaps = 23/195 (11%)

Query: 774 LQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDG 833
           L  A K I+NS YG +  KG R+Y   ++  +T  G +I+   +  IE++G         
Sbjct: 488 LSQAIKIIMNSLYGVLGSKGCRFYDPRLSSSITLRGHEIMLQTKKWIEELG--------- 538

Query: 834 IWCVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETH 893
            + V+ G     F     DL         C  + V +A+  T D     V+ + +T+   
Sbjct: 539 -YSVIYGDTDSTFIKLDDDLTHD-----ECNEIGVFLAKKITTDW----VNEIKQTHNLT 588

Query: 894 SECSIEFEVDGPYKAMILPASKEEGILIKKRYA--VFNDDGTLAELKGFEIKRRGELKLI 951
           S   IEFE    Y    LP  + + +  KKRY   +     +    KG E  R    KL 
Sbjct: 589 SHLEIEFE--SLYSPFFLPTIRGKLVGSKKRYVGKLIKPSESKLVFKGLETVRSDWTKLA 646

Query: 952 KVFQAELFDKFLHGS 966
           + FQ ELF     G+
Sbjct: 647 QQFQFELFTSLFDGN 661


>gi|409406256|ref|ZP_11254718.1| DNA polymerase II protein [Herbaspirillum sp. GW103]
 gi|386434805|gb|EIJ47630.1| DNA polymerase II protein [Herbaspirillum sp. GW103]
          Length = 808

 Score = 57.8 bits (138), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 59/243 (24%), Positives = 101/243 (41%), Gaps = 45/243 (18%)

Query: 741 LNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHKCILNSFYGYVMRKGARWYSME 800
           + ++W+ +   AKA GN                LQ A K I+NSFYG +   G R++   
Sbjct: 493 IAQIWEAR-EAAKAQGNK--------------PLQQALKIIMNSFYGVLGSTGCRFFDSR 537

Query: 801 MAGVVTYTGAKIIQNARLLIEKIGKPL---ELDTDGIWCVLPGSFPENFTFKTKDLKKKL 857
           +A  +T  G +I+   R LIE+ G  +   + D+  +W   P     +   + +++  +L
Sbjct: 538 LASSITRRGHEIMHRTRELIEEAGYEVIYGDTDSTFVWLRQP-----HDDARAREIGLQL 592

Query: 858 TISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEFEVDGPYKAMILPASKEE 917
           T            AR N   ++      +++ Y+  S   ++FEV   Y+  ++P  +  
Sbjct: 593 T------------ARINAWWRHH-----LAEQYQLESALELQFEVH--YQRFLMPHVRGA 633

Query: 918 GILIKKRYAVF---NDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFLHGSTIEECYSA 974
               KKRYA +    +       KG E  R     L + FQ EL+ +   G    +  S 
Sbjct: 634 DTGSKKRYAGYVCTAEGQDKVTYKGLETVRTDWSPLAQRFQQELYLRIFRGEPYRDFISG 693

Query: 975 VAA 977
             A
Sbjct: 694 YVA 696


>gi|153824001|ref|ZP_01976668.1| DNA polymerase II, partial [Vibrio cholerae B33]
 gi|126518477|gb|EAZ75700.1| DNA polymerase II [Vibrio cholerae B33]
          Length = 529

 Score = 57.8 bits (138), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 53/196 (27%), Positives = 84/196 (42%), Gaps = 25/196 (12%)

Query: 777 AHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIG-KPLELDTDGIW 835
           A K I+NSFYG +   G R++   +A  +T  G +I+   + LIE  G + +  DTD  +
Sbjct: 236 AIKIIMNSFYGVLGSSGCRFFDARLASSITMRGHEIMIQTKRLIEARGYQVIYGDTDSTF 295

Query: 836 CVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSE 895
             L G + +    +  D              N+  A     +Q+ T  + + + Y   S 
Sbjct: 296 VALGGQYSQ----QEAD--------------NIGHALVREINQWWT--EHLKQEYALTSI 335

Query: 896 CSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAEL--KGFEIKRRGELKLIKV 953
             +E+E    Y+  ++P  +      KKRYA    DG   +L  KG E  R     L + 
Sbjct: 336 LELEYETH--YRRFLMPTIRGSETGSKKRYAGLKGDGDNEQLIFKGLESARTDWTPLAQR 393

Query: 954 FQAELFDKFLHGSTIE 969
           FQ +L+    HG   E
Sbjct: 394 FQHQLYQLIFHGQDPE 409


>gi|336476181|ref|YP_004615322.1| DNA polymerase Pol2 [Methanosalsum zhilinae DSM 4017]
 gi|335929562|gb|AEH60103.1| DNA polymerase Pol2 [Methanosalsum zhilinae DSM 4017]
          Length = 905

 Score = 57.8 bits (138), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 79/294 (26%), Positives = 121/294 (41%), Gaps = 48/294 (16%)

Query: 733  DRRYEYKGLNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHKCILNSFYGYVMRK 792
            +RR E KGL K  K                  +D   +YD+ QLA K +LNSFYGY    
Sbjct: 517  NRRTETKGLMKGAK-----------------TEDEYRVYDATQLALKILLNSFYGYSGYT 559

Query: 793  GARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLPGSFPENFTFK-TK 851
             AR YS+ +A  VT  G + I   R ++EK     E++T  I         E  T K T 
Sbjct: 560  RARLYSLALANAVTSFGRENILKTRSVVEK-----EIET-VILREGKAYLKEEVTSKDTD 613

Query: 852  DLKKKLTISYP---CVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEFEVDGPYKA 908
            D+  KL++ Y     V +      N   +  + + + ++          +E E +   + 
Sbjct: 614  DVIVKLSVVYGDTDSVFVQCSSETNLELEDVELVGNRIAGIVSHSLPDPMELEFESIAER 673

Query: 909  MILPASKEEGILIKKRYAV--FNDDGT----LAELKGFEIKRRGELKLIKVFQAELFDKF 962
             +  A        KKRYA+  F   GT      ++KG E  RR   +L       + +  
Sbjct: 674  ALFIA--------KKRYALWMFERSGTEWSESIKVKGMETVRRDWCELTSRTLNSVLELI 725

Query: 963  LHGSTIEECYSAVAAVANRWLDLLDNQGKDIA-DSELIDYISESSTMSKSLADY 1015
            L    +E+    V  V +R  ++      D+A D E+ID +  +   SKS+  Y
Sbjct: 726  LKEGDVEKAMEYVRGVVDRVRNI------DVANDPEIIDDLVLTRMYSKSMGSY 773


>gi|414868653|tpg|DAA47210.1| TPA: hypothetical protein ZEAMMB73_972685 [Zea mays]
          Length = 154

 Score = 57.8 bits (138), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 29/56 (51%), Positives = 41/56 (73%), Gaps = 2/56 (3%)

Query: 93  KEKMEMDVEAYLRRRYESQIADIEILEKEDLDLKNHLSGLHKSYLKISFDTVQQLM 148
           ++KME+++EAY+RR YE +I+DIEI+EKEDLDL   L+ LH     I FD   ++M
Sbjct: 98  QDKMELEIEAYIRRHYEGEISDIEIIEKEDLDLVFSLA-LHTES-NILFDVHNEMM 151


>gi|167033007|ref|YP_001668238.1| DNA polymerase II [Pseudomonas putida GB-1]
 gi|166859495|gb|ABY97902.1| DNA polymerase B region [Pseudomonas putida GB-1]
          Length = 786

 Score = 57.8 bits (138), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 80/338 (23%), Positives = 130/338 (38%), Gaps = 64/338 (18%)

Query: 727  TVRSFRDRRYEYKG------LNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHKC 780
            +V  FR  R+          + +VW+G+   AK  GN+               L  A K 
Sbjct: 451  SVEGFRGGRFSRSQHCLPAIVERVWQGR-EAAKREGNA--------------PLSQALKI 495

Query: 781  ILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIG-KPLELDTDGIWCVLP 839
            I+N+FYG +   G R++   +A  +T  G +I++  R LIE  G + +  DTD  +  L 
Sbjct: 496  IMNAFYGVLGSSGCRFFDPRLASSITMRGHQIMRQTRTLIEARGYEVIYGDTDSTFVWLK 555

Query: 840  GSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIE 899
            G+  E        + ++L            VA+ N     Q   + + +     S   ++
Sbjct: 556  GAHDEA---AAAQIGREL------------VAQVN-----QWWREHLRQQMNLQSALELQ 595

Query: 900  FEVDGPYKAMILPASKEEGILIKKRYA--VFNDDGTLAEL-KGFEIKRRGELKLIKVFQA 956
            FEV   Y+  ++P  +      KKRYA  V   DG+   + KG E  R     L + FQ 
Sbjct: 596  FEVH--YRRFLMPTIRGADEGSKKRYAGLVQRADGSEDVVYKGLESVRTDWSPLAQQFQQ 653

Query: 957  ELFDKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLADYG 1016
             LF +   G                + D +    +     EL D +     + + LADY 
Sbjct: 654  ALFGRIFRGQP--------------YRDYVRLYVQQTLAGELDDLLVYRKRLRRPLADYQ 699

Query: 1017 EQKSCAVTTARRLSDF---LGDTMVKDKGLRCQYIVAC 1051
                  V  AR+  ++   LG      +G    Y++  
Sbjct: 700  RNVPPHVRAARQADEYNSSLGRPRQYQRGGWISYVITT 737


>gi|425070026|ref|ZP_18473141.1| hypothetical protein HMPREF1311_03214 [Proteus mirabilis WGLW6]
 gi|404596213|gb|EKA96738.1| hypothetical protein HMPREF1311_03214 [Proteus mirabilis WGLW6]
          Length = 784

 Score = 57.8 bits (138), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 49/192 (25%), Positives = 82/192 (42%), Gaps = 25/192 (13%)

Query: 774 LQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIG-KPLELDTD 832
           L  A K I+N+FYG +   G R++   +A  +T  G +I++  R LIE  G + +  DTD
Sbjct: 491 LSQALKIIMNAFYGVLGSVGCRFFDPRLASSITLRGHEIMKKTRELIESKGYQVIYGDTD 550

Query: 833 GIWCVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYET 892
             +  L  +  E                    +    + R    D  Q     +++TY+ 
Sbjct: 551 STFVWLKAAHNE--------------------VQAEQIGRQLAQDVNQWWKSYLTETYQL 590

Query: 893 HSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIK 952
            S+  +E+E    Y+  ++P  +      KKRYA  + D  +   KG E  R     L +
Sbjct: 591 DSQLELEYETH--YRRFLMPTIRGMETGSKKRYAGLSHDKMV--FKGLETVRTDWTPLAQ 646

Query: 953 VFQAELFDKFLH 964
            FQ EL+ +  +
Sbjct: 647 AFQKELYTRIFN 658



 Score = 41.2 bits (95), Expect = 6.2,   Method: Compositional matrix adjust.
 Identities = 74/361 (20%), Positives = 144/361 (39%), Gaps = 43/361 (11%)

Query: 191 VDLREYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLLEKRVDLLQRAEVHVCAFDIETTK 250
           + L E D+  H R+ ++  +    W+    S T  L    V    R  +   + DIET++
Sbjct: 104 IRLYEADIRPHERYMMERFITAPVWFRYQNSHTVTLKPASV---YRPTLRTVSLDIETSE 160

Query: 251 LPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNVNNE 310
                         + S  L G G  ++    + + + +++ + +PE  GY ++  V++ 
Sbjct: 161 FG-----------ELYSIGLAGCGDNVVF--MLSDTLPEVQESQQPE--GY-RLCYVSSR 204

Query: 311 IELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMS----------EELGFQ 360
           ++LL    A +QE  P   + +N   FD   L T A  +G  +            E GF+
Sbjct: 205 LQLLEKLNAWIQEYDPDAIIGWNLIQFDLRILHTHAQRYGINLLLGRQNTPLEWREHGFK 264

Query: 361 CDKNQGECRAKFACHLDCFAWVKRDSY-LPQGSQGLKAVTKAKLGYD-----PLEVNPED 414
                   + +    +D    +K  ++  P  S  L++V +  LG       P     E 
Sbjct: 265 AGHFFASAQGRLI--IDGIDALKMATWNFPSFS--LESVAQTLLGEGKAIDTPYARMDEI 320

Query: 415 MVRFAKEKPQMMASYSVSDAVATYYLY-MTYVHPFIFSLATIIPMSPDEVLRKGSGTLCE 473
             RF ++KP  +A Y+  D V    ++  T++  F+   A++  ++ D     GS     
Sbjct: 321 NRRFKEDKP-ALAYYNWQDCVLVNRIFDTTHLMEFLLERASVTGLAADR--SGGSVAAFT 377

Query: 474 MLLMVQAYKANVICPNKHQSDPEKFYRNHLLESETYIGGHVECLESGVFRSDLPTSFKLD 533
            L +   ++   + PN+ +   E      +++S   +   V  L+       +  +F +D
Sbjct: 378 HLYLPSMHRLGYVAPNQGEKPEEHSPGGFVMDSTPGLYDSVVVLDYKSLYPSIIRTFLID 437

Query: 534 P 534
           P
Sbjct: 438 P 438


>gi|444380243|ref|ZP_21179384.1| DNA polymerase II [Enterovibrio sp. AK16]
 gi|443675671|gb|ELT82392.1| DNA polymerase II [Enterovibrio sp. AK16]
          Length = 811

 Score = 57.8 bits (138), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 68/281 (24%), Positives = 118/281 (41%), Gaps = 42/281 (14%)

Query: 777  AHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIG-KPLELDTDGIW 835
            A K I+NSFYG +   G R++   +A  +T  G +I++  R LIE  G + +  DTD  +
Sbjct: 518  AIKIIMNSFYGVLGSSGCRFFDHRLASSITMRGHEIMKTTRELIEAKGYEVIYGDTDSTF 577

Query: 836  CVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSE 895
              L   +      +  ++ K L                + N  +   ++ +++ Y+  S 
Sbjct: 578  VSLGRLYSNE---EADEVGKALV--------------EHINAWW---INHLTENYDITSA 617

Query: 896  CSIEFEVDGPYKAMILPASKEEGILIKKRYA-VFNDDGTLAEL-KGFEIKRRGELKLIKV 953
              IE+E    Y+  ++P  + +    KKRYA + N DG    + KG E  R     L +V
Sbjct: 618  LEIEYETH--YQKFLMPTIRGQDTGSKKRYAGLVNKDGERRIVYKGLETVRTDWTPLAQV 675

Query: 954  FQAELFDKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLA 1013
            FQ  L+ K      +EE             + ++N  +   D++LI        + + L+
Sbjct: 676  FQQTLYQKVFDEEEVEEYVR----------NTVENTLRGNNDAQLI----YRKRLRRKLS 721

Query: 1014 DYGEQKSCAVTTARRLSDF---LGDTMVKDKGLRCQYIVAC 1051
            DY +     V  AR+  +    LG  +    G   +YI+  
Sbjct: 722  DYEKNVPPHVKAARKADEANKKLGRNLQYQHGGWIEYIITV 762


>gi|424813627|ref|ZP_18238815.1| DNA polymerase elongation subunit, family B [Candidatus Nanosalina
            sp. J07AB43]
 gi|339758573|gb|EGQ43828.1| DNA polymerase elongation subunit, family B [Candidatus Nanosalina
            sp. J07AB43]
          Length = 410

 Score = 57.8 bits (138), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 75/314 (23%), Positives = 127/314 (40%), Gaps = 69/314 (21%)

Query: 716  ICMRENSFYVDTVRSFRDRRYEYKGLNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQ 775
             C     F+ + ++   + RYE KG  K         K   +SI+ +       +Y S Q
Sbjct: 86   FCQDNQGFFPELIQGLVESRYEIKGEMK---------KLDKDSIEYER------IY-SRQ 129

Query: 776  LAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIG-KPLELDTDGI 834
             A K + NSFYGY+   GARWYS E A   T+ G K I++      ++G + +  DTD +
Sbjct: 130  QAQKVLANSFYGYLGYNGARWYSKECAQATTFMGRKYIEDTIETAREMGFEIVYGDTDSV 189

Query: 835  WCVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHS 894
            +  L G   ++   +  +  +K+    P  M                             
Sbjct: 190  F--LSG---DDIEERKNEFLEKVNSDLPEFM----------------------------- 215

Query: 895  ECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVF 954
                E E +G +K      SK+ G   KK+YA+ +++  + ++ GFE  RR    + K  
Sbjct: 216  ----ELEFEGFFKTGFF-TSKDSGEGAKKKYALMDEEEDM-KITGFEQVRRDWSSVAKDT 269

Query: 955  QAELFDKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLAD 1014
            Q ++  K L+           A +    ++ L NQ  D+    +       +T++K   D
Sbjct: 270  QRKVLQKVLNKKV-----DQAAEIVKNTINSLKNQEVDVEKLRIF------TTLTKPPED 318

Query: 1015 YGEQKSCAVTTARR 1028
            Y E  +  V  A++
Sbjct: 319  Y-ESTAPHVEAAKK 331


>gi|195377844|ref|XP_002047697.1| GJ11779 [Drosophila virilis]
 gi|194154855|gb|EDW70039.1| GJ11779 [Drosophila virilis]
          Length = 1092

 Score = 57.8 bits (138), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 57/199 (28%), Positives = 85/199 (42%), Gaps = 34/199 (17%)

Query: 185 DFLDCIVDLREYDVPYHIRFAIDNDVRCGQWYDVSIS-------STGPLLEKR----VDL 233
           DF DC     E ++ + IRF +D  V    W D+          ++ P  E R    VD+
Sbjct: 221 DFQDCRA--FENNIDFDIRFMVDTHVVGCNWIDLPPGVWRLRGHNSKPATESRCQIEVDV 278

Query: 234 L--------------QRAEVHVCAFDIETTKLPLKFPDADYDIIMMISYMLDGQGYLIIN 279
                          + A + + +FDIE       FP+A  D ++ I+ M+  QG     
Sbjct: 279 AYDQFISHEPEGEWSKVAPLRILSFDIECAGRKGIFPEAKMDPVIQIANMVIRQG----E 334

Query: 280 RECVGEDIEDLEYTPKPEFEGYFKVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDW 339
            E    ++  L+    P      +V + + E +LL  W A ++EV P I   YN + FD 
Sbjct: 335 SEPFIRNVFTLKQC-APIIGS--QVLSYDQETQLLDKWSAFVREVDPDILTGYNINNFDI 391

Query: 340 PFLETRAAHHGFKMSEELG 358
           P+L  RAAH   K  E LG
Sbjct: 392 PYLLNRAAHLKVKNFEYLG 410


>gi|332142717|ref|YP_004428455.1| DNA polymerase II [Alteromonas macleodii str. 'Deep ecotype']
 gi|327552739|gb|AEA99457.1| DNA polymerase II [Alteromonas macleodii str. 'Deep ecotype']
          Length = 790

 Score = 57.8 bits (138), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 70/272 (25%), Positives = 110/272 (40%), Gaps = 44/272 (16%)

Query: 777  AHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLEL-DTDGIW 835
            A K ++NSFYG +   G  +Y   +A  +T  G +I+Q     IE++G  +   DTD  +
Sbjct: 501  AIKILMNSFYGVLGSGGCPFYDPRLASSITLRGHEIMQTTAGWIEELGYTVIYGDTDSTF 560

Query: 836  CVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSE 895
              + G    N T  T     +  I    ++          N+++  L+      Y+    
Sbjct: 561  VHVEG----NGTLGTP---TETGIKLAQII----------NEKWSALL---KDRYDI--A 598

Query: 896  CSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQ 955
            C +E E +  +    +P  +      KKRYA   D G L   KG E  R     L K FQ
Sbjct: 599  CHLEIEFESHFSTFFMPTIRGSTEGSKKRYAGMKD-GQLT-FKGLENVRSDWTTLAKTFQ 656

Query: 956  AELFDKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLADY 1015
             EL+++   G  +E   S          D+L+     +   EL D +     + K L+ Y
Sbjct: 657  YELYERVFTGQPVESYIS----------DMLNA----VKAGELDDDLVYKKRLRKPLSSY 702

Query: 1016 GEQKSCAVTTARRLSDFLGDTMVKDKGLRCQY 1047
             +     V  ARR      D   K++GL  +Y
Sbjct: 703  IKSLPPHVKAARR-----ADEHFKEQGLPLRY 729


>gi|324120764|dbj|BAJ78773.1| DNA polymerase delta catalytic subunit [Stenopsyche marmorata]
          Length = 1000

 Score = 57.4 bits (137), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 69/295 (23%), Positives = 116/295 (39%), Gaps = 49/295 (16%)

Query: 82  YKFRPYFYAATKEKMEMDVEAYLRRRYESQIADIEILEKEDLDLKNHLSGLHKSYLKISF 141
           + F PYFY +  E  + +    L+      I +         DL+++   + ++ L+++ 
Sbjct: 36  HGFTPYFYVSVPESFKEETCHKLKSTLNKAILN---------DLRSNKESIREAVLQVTL 86

Query: 142 DTVQQLMDVKKDLLHVVERNQAKFDAAEAYESILTGKR--EQRPQDFLDCIVDLREYDVP 199
              + LM+   D     + N     A      I   KR  E+ P +F        E ++ 
Sbjct: 87  FQAKSLMNYTGD-----KENTYARIAVALPRLIAAAKRLIEKTPLEFHLMDPSFYESNID 141

Query: 200 YHIRFAIDNDV--------RCGQWY--DVSISSTGPLLEKRV----------------DL 233
           + IRF +D  V          G+W   D +I+   PL   ++                D 
Sbjct: 142 FDIRFMVDTTVVGCSWIELPAGKWRIRDSNIAPLKPLSRCQIEVDVAWNGFIAHQPEGDW 201

Query: 234 LQRAEVHVCAFDIETTKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYT 293
            + A   + +FDIE       FP+   D ++ I+ M+  QG      E    ++  L  T
Sbjct: 202 AKVAPFRILSFDIECAGRRGIFPEPQKDPVIQIANMVIRQG----ESEPFIRNVFTLN-T 256

Query: 294 PKPEFEGYFKVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAH 348
             P    +  V +   E E+L  W   ++EV P I   YN + FD+P+L  RA H
Sbjct: 257 CAPIVGSH--VLSFQTEQEMLCKWSEFIREVDPDIITGYNINNFDFPYLIDRAHH 309


>gi|333891650|ref|YP_004465525.1| DNA polymerase II [Alteromonas sp. SN2]
 gi|332991668|gb|AEF01723.1| DNA polymerase II [Alteromonas sp. SN2]
          Length = 789

 Score = 57.4 bits (137), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 67/281 (23%), Positives = 113/281 (40%), Gaps = 58/281 (20%)

Query: 777  AHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWC 836
            A K ++NSFYG +   G  +Y   +A  +T  G +I+Q     IE+ G          + 
Sbjct: 494  AIKILMNSFYGVLGSGGCPFYDPRLASSITLRGHEIMQTTAKWIEEAG----------FS 543

Query: 837  VLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETH--- 893
            V+ G     F                 V +N + +    N+  Q+L + +++ +++    
Sbjct: 544  VIYGDTDSTF-----------------VHVNNNTSLGTPNETGQSLANTINQKWQSKLRE 586

Query: 894  ---SECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAEL--KGFEIKRRGEL 948
                +C ++ E +  ++   +P  +   +  KKRYA     G   EL  KG E  R    
Sbjct: 587  DYDIDCHLDIEFETHFETFFMPTIRGSALGSKKRYAGLKQIGDKKELVFKGLENVRSDWT 646

Query: 949  KLIKVFQAELFDKFLHGSTIEECYSAVAAVANRWLDLLDN--QGKDIADSELIDYISESS 1006
            +L K FQ EL+ +              A V++     +DN  QGK+  D+ L+     + 
Sbjct: 647  ELAKYFQYELYRRVFEK----------APVSDFIKQTVDNIRQGKE--DTRLV----YAK 690

Query: 1007 TMSKSLADYGEQKSCAVTTARRLSDFLGDTMVKDKGLRCQY 1047
             + K L DY +     V  AR     L D +    G R +Y
Sbjct: 691  RLRKPLNDYIKSLPPHVKAAR-----LADDINSKTGQRLRY 726


>gi|410862982|ref|YP_006978216.1| DNA polymerase II [Alteromonas macleodii AltDE1]
 gi|410820244|gb|AFV86861.1| DNA polymerase II [Alteromonas macleodii AltDE1]
          Length = 790

 Score = 57.4 bits (137), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 70/272 (25%), Positives = 110/272 (40%), Gaps = 44/272 (16%)

Query: 777  AHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLEL-DTDGIW 835
            A K ++NSFYG +   G  +Y   +A  +T  G +I+Q     IE++G  +   DTD  +
Sbjct: 501  AIKILMNSFYGVLGSGGCPFYDPRLASSITLRGHEIMQTTAGWIEELGYTVIYGDTDSTF 560

Query: 836  CVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSE 895
              + G    N T  T     +  I    ++          N+++  L+      Y+    
Sbjct: 561  VHVEG----NGTLGTP---TETGIKLAQII----------NEKWSALL---KDRYDI--A 598

Query: 896  CSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQ 955
            C +E E +  +    +P  +      KKRYA   D G L   KG E  R     L K FQ
Sbjct: 599  CHLEIEFESHFSTFFMPTIRGSTEGSKKRYAGMKD-GQLT-FKGLENVRSDWTTLAKTFQ 656

Query: 956  AELFDKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLADY 1015
             EL+++   G  +E   S          D+L+     +   EL D +     + K L+ Y
Sbjct: 657  YELYERVFTGQPVESYIS----------DMLNA----VKAGELDDDLVYKKRLRKPLSSY 702

Query: 1016 GEQKSCAVTTARRLSDFLGDTMVKDKGLRCQY 1047
             +     V  ARR      D   K++GL  +Y
Sbjct: 703  IKSLPPHVKAARR-----ADEHFKEQGLPLRY 729


>gi|1706513|sp|P52025.1|DPOL_METVO RecName: Full=DNA polymerase
 gi|495654|gb|AAA72443.1| DNA polymerase [Methanococcus voltae]
          Length = 824

 Score = 57.4 bits (137), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 77/336 (22%), Positives = 138/336 (41%), Gaps = 57/336 (16%)

Query: 195 EYDVPYHIRFAIDNDVRCGQWY--DVSISSTGPLLEKRVDLLQRAEVHVCAFDIETTKLP 252
           E+D+P+  R+ ID D+     Y  D  I ++ P            E++  AFD+E     
Sbjct: 141 EFDIPFLRRYMIDQDIVPSAKYSEDNKIDNSIP------------ELNCIAFDMEL--YC 186

Query: 253 LKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNVNNEIE 312
            K P+A  D I+M++        +I  ++      E+ EY    ++        V +E E
Sbjct: 187 KKEPNAKKDPIIMVNLFSKDYQKVITYKK-----FENSEYNGCVDY--------VKDEKE 233

Query: 313 LLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDKNQGE----- 367
           L++     +++    +  TYNGD FD+P+L+ RA  +      EL F    N  +     
Sbjct: 234 LIQKTIEILKQY--DVIYTYNGDNFDFPYLKKRANIYEI----ELDFDNASNSQQPQIIK 287

Query: 368 ---------CRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRF 418
                     +     H+D +   ++   L      L+ V +     +   V+  D+ + 
Sbjct: 288 ISKGGINRKSKIPGIIHIDLYPIARK--LLNLTKYKLENVVQELFKINKEAVDYGDIPKM 345

Query: 419 AKEKPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMV 478
            + +   +  Y+  DA+ TY +   Y  P     + I+     +  R  S  + E LL+ 
Sbjct: 346 WETEDTTLLRYAYEDALYTYKM-GNYFLPLEIMFSRIVNQPLYDTSRMNSSQMVEFLLLK 404

Query: 479 QAYKANVICPNKHQSDPEKFYRNHLLESETYIGGHV 514
           ++++ N+I PN+  S     YR     S  Y GG+V
Sbjct: 405 RSFEQNMISPNRPSSSS---YRERAKFS--YEGGYV 435



 Score = 47.0 bits (110), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 48/172 (27%), Positives = 74/172 (43%), Gaps = 21/172 (12%)

Query: 775 QLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIG-KPLELDTDG 833
           Q + K + NS YGY+    ARWYS + A +VT  G K IQ      E+ G K +  DTDG
Sbjct: 522 QKSIKVLANSHYGYLAFPMARWYSDKCAEMVTGLGRKYIQETIEKAEEFGFKVIYADTDG 581

Query: 834 IWCVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETH 893
            +        +    +  D   KL+ + P +          + ++   L     K     
Sbjct: 582 FYAKWDYDKLQKGKKEENDKSDKLS-NLPKL----------SKEELIILTKKFLKGINEE 630

Query: 894 SECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRR 945
               +E E +G +K  +         + KK+YA+  DDG +  +KG E+ RR
Sbjct: 631 LPEGMELEFEGHFKRGLF--------VTKKKYALIEDDGHIV-VKGLEVVRR 673


>gi|73669283|ref|YP_305298.1| replicative DNA polymerase I [Methanosarcina barkeri str. Fusaro]
 gi|72396445|gb|AAZ70718.1| replicative DNA polymerase I [Methanosarcina barkeri str. Fusaro]
          Length = 932

 Score = 57.4 bits (137), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 99/422 (23%), Positives = 178/422 (42%), Gaps = 58/422 (13%)

Query: 84  FRPYFYAATKEKMEMDVEAYLRRRYESQIADIEILEKEDLDLKNHLSGLHKS---YLKIS 140
           F PYFY   K   +++  A L     +Q+  +EI+EK +        G  K+    L+++
Sbjct: 41  FEPYFY--LKASGDLNAVARLIEETFTQVKKVEIVEKFEP------IGYQKTKIKMLRVT 92

Query: 141 FDTVQQLMDVKKDLLHVVERNQAKFDAAEAYES-ILTGKREQRPQDFLDCI---VDLREY 196
               +++ +++ ++L + E  +A+    E YE+ IL   R    +D    +    +    
Sbjct: 93  THLPREVPEIRDEILKLQEVLKAE-GKWEVYETDILFRNRFLIDKDLGGMVWVSAEGEAV 151

Query: 197 DVPYHIRFAIDNDVRCGQWY-DVSISSTGPLLEKRVDLLQRAEVHVCAFDIETTKLPLKF 255
           D   ++R       RCG++  D SI ++G     +V+ L  A +   AFDIE   L    
Sbjct: 152 DPAKYLRTNGSGSSRCGKFTCDASILASG---LNKVENLTLAPLKYLAFDIECLPLDGGM 208

Query: 256 PDADYDIIMMISYMLD----GQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNVNNEI 311
           P  +   I+MIS+  +    G   L++    + + +E+L             V +  +E 
Sbjct: 209 PSPEVSPIIMISFSFEPEYKGHKTLVL----LAKPVENLNS----------DVWSYTDET 254

Query: 312 ELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRA---AHHGFKMSEELGFQCDK----- 363
           E+L  +F    +  P I + YN   FD P++  R       G  ++  +G    K     
Sbjct: 255 EMLNKFFEIFCDYDPDIVIGYNHQDFDIPYITDRVKTLVSEGNSINPVVGRDGSKIGYRK 314

Query: 364 ----NQGECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRF- 418
                + E + +    +D    V+R   L Q +  L+AV+K  L  + L+V P +M  + 
Sbjct: 315 FGLITRTEMKGRVV--VDALPLVRRAFSLKQYT--LRAVSKELLSREKLDVPPLEMEEYW 370

Query: 419 --AKEKPQMMASYSVSDA-VATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEML 475
               EK +    YS  DA +A   +    +     +LA +      EV+  G  ++ E L
Sbjct: 371 LDTGEKFKKFVDYSRRDAELALELILNLRLLDKYVALAQVSGSLLQEVVDGGQTSMVETL 430

Query: 476 LM 477
           L+
Sbjct: 431 LL 432



 Score = 50.4 bits (119), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 68/292 (23%), Positives = 122/292 (41%), Gaps = 32/292 (10%)

Query: 770  LYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEK-IGKPLE 828
            + D+ QLA K +LNSFYGY     AR YS+ +A  VT  G   I N R +I   IGK + 
Sbjct: 558  VLDATQLALKILLNSFYGYSGYARARLYSLTLANAVTSFGRSNILNTREIINNTIGKIIL 617

Query: 829  LDTDGIWCVLPGSFPENFTFKTKDLKKKLTISYP---CVMLNVDVARNNTNDQYQTLVDP 885
             +   +         E      +D   +L+++Y     V ++     + + ++   + + 
Sbjct: 618  RNKTALL------LDEAGELSPQDRVVELSVAYGDTDSVFVHCKSRGDLSLEEVSLIGNR 671

Query: 886  VSKTYETHSECSIEFEVDGPYKAMILPASKEEGILIKKRYAV--FNDDGTLAE----LKG 939
            ++          +E E +   K  +L A        KKRYA+  F    +  E    +KG
Sbjct: 672  LANIVSVSLPDPMELEFESIAKRALLIA--------KKRYALWFFEPKNSGWEDKIKVKG 723

Query: 940  FEIKRRGELKLIKVFQAELFDKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELI 999
             E  RR   +L  V    + +  L    +++    V  + ++  +L         DSE+I
Sbjct: 724  METVRRDWCELTSVTLNRVLELVLIKGDVDQAVEYVRQIVSKVRNL-----DPAKDSEII 778

Query: 1000 DYISESSTMSKSLADYGEQKSCAVTTARRLSDFLGDTMVKDKGLRCQYIVAC 1051
            + +  + T+++ +  Y + K   +T A  L    G  +V   G R  +++  
Sbjct: 779  ESLVLTRTLTRKIESY-KNKQPHLTVAENLKKRTG--VVPSIGTRIPFVITA 827


>gi|73538411|ref|YP_298778.1| DNA polymerase II [Ralstonia eutropha JMP134]
 gi|72121748|gb|AAZ63934.1| DNA damage-inducible DNA polymerase II [Ralstonia eutropha JMP134]
          Length = 788

 Score = 57.4 bits (137), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 64/249 (25%), Positives = 105/249 (42%), Gaps = 45/249 (18%)

Query: 725 VDTVRSFRDRRYEYKG------LNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAH 778
            D+V  FR  R+          + +VW+G+   AK  GN                L  A 
Sbjct: 449 ADSVAGFRGARFSRTKHCLPSIVARVWQGR-EAAKRDGNK--------------PLSQAL 493

Query: 779 KCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVL 838
           K I+N+FYG +   G R++   +A  +T  G +I+Q  R LIE  G          + V+
Sbjct: 494 KIIMNAFYGVLGSSGCRFFDPRLASSITMRGHEIMQQTRTLIEARG----------YEVI 543

Query: 839 PGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSI 898
            G     F +    L++  T +    +    VA    ND ++   D + +TY   S   +
Sbjct: 544 YGDTDSTFVW----LRRARTEADASQIGRSLVA--YVNDWWR---DHLWQTYGLESALEL 594

Query: 899 EFEVDGPYKAMILPASKEEGILIKKRYA--VFNDDGTLAEL-KGFEIKRRGELKLIKVFQ 955
           +FE    ++  ++P  +   +  KKRYA  V   DG +  + KG E  R     L + FQ
Sbjct: 595 QFETH--FRRFLMPTIRGTDLGSKKRYAGQVQRPDGRVEMVFKGLETVRTDWSPLAQEFQ 652

Query: 956 AELFDKFLH 964
             L+++  +
Sbjct: 653 QVLYERIFN 661


>gi|403415899|emb|CCM02599.1| predicted protein [Fibroporia radiculosa]
          Length = 1470

 Score = 57.4 bits (137), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 71/263 (26%), Positives = 112/263 (42%), Gaps = 56/263 (21%)

Query: 764  AQDMVVLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKI 823
             Q  ++ +D  Q+A K   NS YG +  + +R+Y+  +A + T+ G +I+ + R L E  
Sbjct: 957  TQSQLLQWDIKQMALKLTANSMYGCLGFEYSRFYARPLAALTTFKGREILTHTRELAES- 1015

Query: 824  GKPLELDTDGIWCVLPGSFPENF-TFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTL 882
               L+LD      V+ G     F      DL + L IS           +   ND+Y+ L
Sbjct: 1016 ---LQLD------VVYGDTDSVFVNSNVTDLAEALKISSEF--------KKAVNDRYRLL 1058

Query: 883  VDPVSKTYETHSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFN-DDGTL--AELKG 939
                            E ++DG ++ ++L        L KK+YA    +DGT    E+KG
Sbjct: 1059 ----------------EIDLDGIFQRLLL--------LQKKKYAAIKVEDGTRTSTEVKG 1094

Query: 940  FEIKRRGELKLIKVFQAELFDKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDI--ADSE 997
             ++KRR    L K     + D+ L G   E        V  R  D L   G+D+     +
Sbjct: 1095 LDMKRREYCNLSKNVSQYVLDQILSGEETE-------TVVERVHDYLTTMGEDVRAGKIK 1147

Query: 998  LIDYISESSTMSKSLADYGEQKS 1020
            L D+I     + K+  DY + KS
Sbjct: 1148 LEDFIV-FKRLGKNPEDYPDGKS 1169


>gi|312376112|gb|EFR23299.1| hypothetical protein AND_13138 [Anopheles darlingi]
          Length = 1092

 Score = 57.4 bits (137), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 69/318 (21%), Positives = 127/318 (39%), Gaps = 45/318 (14%)

Query: 68  LYFVSQDGSTFKSK-YKFRPYFYAATKEKMEMDVEAYLRRRYESQIADIEILEKEDLDLK 126
           ++ V+ +G++  +  + F PY Y A          +  R   +  + +         D++
Sbjct: 111 MFGVTMEGNSVCAHVHGFSPYLYIAAPRGFTKAHLSEFRTALDKSVLN---------DMR 161

Query: 127 NHLSGLHKSYLKISFDTVQQLMDVK-KDLLHVVERNQAKFDAAEAYESILTGKREQRPQD 185
           ++   + ++ L ++    Q +M    +D    ++   A      A + +L  ++     D
Sbjct: 162 SNKENVQEAVLDVALVERQSIMGYNGEDKFQFIKVTVALPRLLAAVKRLLEKEQMLPSMD 221

Query: 186 FLDCIVDLREYDVPYHIRFAIDNDVRCGQWYDVSISS-------TGPLLEKRVDL----- 233
           F DC V   E ++ + IRF +D  V    W ++   +         P  E R  +     
Sbjct: 222 FQDCRV--YESNIDFDIRFMVDRGVVGCSWIELPPGTWYYRKKGKMPAPETRCQIEVDVA 279

Query: 234 -------------LQRAEVHVCAFDIETTKLPLKFPDADYDIIMMISYMLDGQGYLIINR 280
                         + A + + +FDIE       FP+  +D ++ I+ M+  QG     +
Sbjct: 280 YDAFIAHEPEGEWAKVAPLRILSFDIECAGRKGIFPEPQHDPVIQIANMVIRQG----EQ 335

Query: 281 ECVGEDIEDLEYTPKPEFEGYFKVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWP 340
           E    ++  L  T  P      +V + N E ELL  W   ++E+ P I   YN + FD P
Sbjct: 336 EPFLRNVFTLN-TCAPIVGA--QVLSYNTEQELLDQWANFVRELDPDILTGYNINNFDIP 392

Query: 341 FLETRAAHHGFKMSEELG 358
           +L  RA+H      E LG
Sbjct: 393 YLLNRASHLKVSRFEYLG 410


>gi|147675373|ref|YP_001216782.1| DNA polymerase II [Vibrio cholerae O395]
 gi|227117679|ref|YP_002819575.1| DNA polymerase II [Vibrio cholerae O395]
 gi|262169467|ref|ZP_06037159.1| DNA polymerase II [Vibrio cholerae RC27]
 gi|146317256|gb|ABQ21795.1| DNA polymerase II [Vibrio cholerae O395]
 gi|227013129|gb|ACP09339.1| DNA polymerase II [Vibrio cholerae O395]
 gi|262022280|gb|EEY40989.1| DNA polymerase II [Vibrio cholerae RC27]
          Length = 787

 Score = 57.4 bits (137), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 53/196 (27%), Positives = 83/196 (42%), Gaps = 25/196 (12%)

Query: 777 AHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIG-KPLELDTDGIW 835
           A K I+NSFYG +   G R++   +A  +T  G +I+   + LIE  G + +  DTD  +
Sbjct: 494 AIKIIMNSFYGVLGSSGCRFFDARLASSITMRGHEIMIQTKRLIEARGYQVIYGDTDSTF 553

Query: 836 CVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSE 895
             L G + +    +  D            + N  V+  N     Q   + + + Y   S 
Sbjct: 554 VALGGQYSQ----QEAD-----------AIGNALVSEIN-----QWWTEHLKQEYALASI 593

Query: 896 CSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAEL--KGFEIKRRGELKLIKV 953
             +E+E    Y+  ++P  +      KKRYA    DG   +L  KG E  R     L + 
Sbjct: 594 LELEYETH--YRRFLMPTIRGSETGSKKRYAGLKGDGDNEQLIFKGLESARTDWTPLAQR 651

Query: 954 FQAELFDKFLHGSTIE 969
           FQ +L+    HG   E
Sbjct: 652 FQHQLYQLIFHGQDPE 667


>gi|384424356|ref|YP_005633714.1| DNA polymerase II [Vibrio cholerae LMA3984-4]
 gi|327483909|gb|AEA78316.1| DNA polymerase II [Vibrio cholerae LMA3984-4]
          Length = 787

 Score = 57.4 bits (137), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 52/196 (26%), Positives = 81/196 (41%), Gaps = 25/196 (12%)

Query: 777 AHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIG-KPLELDTDGIW 835
           A K I+NSFYG +   G R++   +A  +T  G +I+   + LIE  G + +  DTD  +
Sbjct: 494 AIKIIMNSFYGVLGSSGCRFFDARLASSITMRGHEIMIQTKQLIEARGYQVIYGDTDSTF 553

Query: 836 CVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSE 895
             L G + +         ++   I +  V    +    +   +Y  L   +   YETH  
Sbjct: 554 VALGGQYSQ---------QEADNIGHALVREINEWWTEHLKQEY-ALTSILELEYETH-- 601

Query: 896 CSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAEL--KGFEIKRRGELKLIKV 953
                     Y+  ++P  +      KKRYA    DG   +L  KG E  R     L + 
Sbjct: 602 ----------YRRFLMPTIRGSETGSKKRYAGLKGDGDNEQLIFKGLESARTDWTPLAQR 651

Query: 954 FQAELFDKFLHGSTIE 969
           FQ +L+    HG   E
Sbjct: 652 FQHQLYQLIFHGQDPE 667


>gi|343512937|ref|ZP_08750052.1| DNA polymerase II [Vibrio scophthalmi LMG 19158]
 gi|342794377|gb|EGU30150.1| DNA polymerase II [Vibrio scophthalmi LMG 19158]
          Length = 787

 Score = 57.4 bits (137), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 50/197 (25%), Positives = 83/197 (42%), Gaps = 35/197 (17%)

Query: 777 AHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWC 836
           A K I+NSFYG +   G R++   +A  +T  G +I+   + LIE  G          + 
Sbjct: 494 AIKIIMNSFYGVLGSSGCRFFDTRLASSITMRGHEIMIQTKKLIEDQG----------YQ 543

Query: 837 VLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSE- 895
           V+ G     F                 V LN  V++   +   Q+LV+ +++ +  H + 
Sbjct: 544 VIYGDTDSTF-----------------VSLNSQVSQAQADLIGQSLVEHINQWWTQHLKQ 586

Query: 896 -----CSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAEL--KGFEIKRRGEL 948
                  +E E +  YK  ++P  + +    KKRYA    +G   ++  KG E  R    
Sbjct: 587 EYNLNSILEIEYETHYKKFLMPTIRGQETGSKKRYAGLIGEGEQEKIIFKGLESARTDWT 646

Query: 949 KLIKVFQAELFDKFLHG 965
            L + FQ +L+    HG
Sbjct: 647 PLSQSFQQQLYQMIFHG 663


>gi|444425524|ref|ZP_21220963.1| DNA polymerase II [Vibrio campbellii CAIM 519 = NBRC 15631]
 gi|444241255|gb|ELU52782.1| DNA polymerase II [Vibrio campbellii CAIM 519 = NBRC 15631]
          Length = 787

 Score = 57.4 bits (137), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 50/193 (25%), Positives = 81/193 (41%), Gaps = 27/193 (13%)

Query: 777 AHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIG-KPLELDTDGIW 835
           A K I+NSFYG +   G R++   +A  +T  G +I++  ++LIE  G + +  DTD  +
Sbjct: 494 AIKIIMNSFYGVLGSSGCRFFDTRLASSITMRGHEIMKQTKVLIEDKGYQVIYGDTDSTF 553

Query: 836 CVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQY-QTLVDPVSKTYETHS 894
             L G++ +                     ++ D   N   D   Q   D +   Y  +S
Sbjct: 554 VSLNGAYSQ---------------------VDADKIGNELVDYINQWWNDHLRSEYNLNS 592

Query: 895 ECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAEL--KGFEIKRRGELKLIK 952
              +E+E    Y+  ++P  +      KKRYA    +G    +  KG E  R     L +
Sbjct: 593 ILELEYETH--YRKFLMPTIRGAETGSKKRYAGLIGEGEQERIIFKGLESARTDWTPLAQ 650

Query: 953 VFQAELFDKFLHG 965
            FQ  L+    HG
Sbjct: 651 RFQNTLYQMIFHG 663


>gi|343514013|ref|ZP_08751101.1| DNA polymerase II [Vibrio sp. N418]
 gi|342801143|gb|EGU36634.1| DNA polymerase II [Vibrio sp. N418]
          Length = 787

 Score = 57.0 bits (136), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 50/197 (25%), Positives = 83/197 (42%), Gaps = 35/197 (17%)

Query: 777 AHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWC 836
           A K I+NSFYG +   G R++   +A  +T  G +I+   + LIE  G          + 
Sbjct: 494 AIKIIMNSFYGVLGSSGCRFFDTRLASSITMRGHEIMIQTKKLIEAEG----------YQ 543

Query: 837 VLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSE- 895
           V+ G     F                 V LN  V++   +   Q+LV+ +++ +  H + 
Sbjct: 544 VIYGDTDSTF-----------------VSLNSQVSQAQADLIGQSLVEHINQWWTQHLKQ 586

Query: 896 -----CSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAEL--KGFEIKRRGEL 948
                  +E E +  YK  ++P  + +    KKRYA    +G   ++  KG E  R    
Sbjct: 587 EYNLNSILEIEYETHYKKFLMPTIRGQETGSKKRYAGLIGEGEKEKIIFKGLESARTDWT 646

Query: 949 KLIKVFQAELFDKFLHG 965
            L + FQ +L+    HG
Sbjct: 647 PLSQSFQQQLYQMIFHG 663


>gi|388602213|ref|ZP_10160609.1| DNA polymerase II [Vibrio campbellii DS40M4]
          Length = 787

 Score = 57.0 bits (136), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 50/193 (25%), Positives = 81/193 (41%), Gaps = 27/193 (13%)

Query: 777 AHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIG-KPLELDTDGIW 835
           A K I+NSFYG +   G R++   +A  +T  G +I++  ++LIE  G + +  DTD  +
Sbjct: 494 AIKIIMNSFYGVLGSSGCRFFDTRLASSITMRGHEIMKQTKVLIEDKGYQVIYGDTDSTF 553

Query: 836 CVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQY-QTLVDPVSKTYETHS 894
             L G++ +                     ++ D   N   D   Q   D +   Y  +S
Sbjct: 554 VSLNGAYSQ---------------------VDADKIGNELVDYINQWWNDHLRSEYNLNS 592

Query: 895 ECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAEL--KGFEIKRRGELKLIK 952
              +E+E    Y+  ++P  +      KKRYA    +G    +  KG E  R     L +
Sbjct: 593 ILELEYETH--YRKFLMPTIRGAETGSKKRYAGLIGEGKQERIIFKGLESARTDWTPLAQ 650

Query: 953 VFQAELFDKFLHG 965
            FQ  L+    HG
Sbjct: 651 RFQNTLYQMIFHG 663


>gi|238753165|ref|ZP_04614609.1| DNA damage-inducible DNA polymerase II [Yersinia rohdei ATCC 43380]
 gi|238708616|gb|EEQ00890.1| DNA damage-inducible DNA polymerase II [Yersinia rohdei ATCC 43380]
          Length = 790

 Score = 57.0 bits (136), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 57/222 (25%), Positives = 92/222 (41%), Gaps = 40/222 (18%)

Query: 741 LNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHKCILNSFYGYVMRKGARWYSME 800
           +N++W+G+   AK   N                L  A K I+N+FYG +   G R++   
Sbjct: 476 VNQIWQGR-EAAKRQQNK--------------PLSQALKIIMNAFYGVLGSSGCRFFDPR 520

Query: 801 MAGVVTYTGAKIIQNARLLIEKIG-KPLELDTDGIWCVLPGSFPENFTFKTKDLKKKLTI 859
           +A  +T  G  I++  R LIE  G + +  DTD  +  L  +  E    +   + K L  
Sbjct: 521 LASSITLRGHDIMRQTRELIEAQGYQVIYGDTDSTFVWLKSAHSEE---QASQIGKALV- 576

Query: 860 SYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEFEVDGPYKAMILPASKEEGI 919
                         + N  +QT    + +TY+    C++E E +  Y+  ++P  +    
Sbjct: 577 -------------QHVNQWWQTH---IRQTYDL--PCALELEFETHYRRFLMPTIRGAEQ 618

Query: 920 LIKKRYA--VFNDDGTLAELKGFEIKRRGELKLIKVFQAELF 959
             KKRYA  +    G     KG E  R     L + FQ EL+
Sbjct: 619 GSKKRYAGLITTPTGEQMIYKGLETVRTDWTPLAQQFQRELY 660


>gi|262165476|ref|ZP_06033213.1| DNA polymerase II [Vibrio mimicus VM223]
 gi|262025192|gb|EEY43860.1| DNA polymerase II [Vibrio mimicus VM223]
          Length = 787

 Score = 57.0 bits (136), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 52/192 (27%), Positives = 82/192 (42%), Gaps = 25/192 (13%)

Query: 777 AHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIG-KPLELDTDGIW 835
           A K I+NSFYG +   G R++   +A  +T  G +I+   + LIE  G + +  DTD  +
Sbjct: 494 AIKIIMNSFYGVLGSSGCRFFDTRLASSITMRGHEIMIQTKQLIEARGYQVIYGDTDSTF 553

Query: 836 CVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSE 895
             L G     +T +  D            + N  V+  N     Q   + + + Y   S 
Sbjct: 554 VALGG----QYTQQEAD-----------AIGNALVSEIN-----QWWTEHLKQEYALTSI 593

Query: 896 CSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAEL--KGFEIKRRGELKLIKV 953
             +E+E    Y+  ++P  +      KKRYA    DG   ++  KG E  R     L + 
Sbjct: 594 LELEYETH--YRRFLMPTIRGAETGSKKRYAGLKGDGDKEQIIFKGLESARTDWTPLAQR 651

Query: 954 FQAELFDKFLHG 965
           FQ +L+    HG
Sbjct: 652 FQNQLYQLIFHG 663


>gi|258622636|ref|ZP_05717657.1| DNA polymerase elongation subunit [Vibrio mimicus VM573]
 gi|424807845|ref|ZP_18233247.1| DNA polymerase II [Vibrio mimicus SX-4]
 gi|258585092|gb|EEW09820.1| DNA polymerase elongation subunit [Vibrio mimicus VM573]
 gi|342324382|gb|EGU20163.1| DNA polymerase II [Vibrio mimicus SX-4]
          Length = 787

 Score = 57.0 bits (136), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 52/192 (27%), Positives = 82/192 (42%), Gaps = 25/192 (13%)

Query: 777 AHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIG-KPLELDTDGIW 835
           A K I+NSFYG +   G R++   +A  +T  G +I+   + LIE  G + +  DTD  +
Sbjct: 494 AIKIIMNSFYGVLGSSGCRFFDTRLASSITMRGHEIMIQTKQLIEARGYQVIYGDTDSTF 553

Query: 836 CVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSE 895
             L G     +T +  D            + N  V+  N     Q   + + + Y   S 
Sbjct: 554 VALGG----QYTQQEAD-----------AIGNALVSEIN-----QWWTEHLKQEYALTSI 593

Query: 896 CSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAEL--KGFEIKRRGELKLIKV 953
             +E+E    Y+  ++P  +      KKRYA    DG   ++  KG E  R     L + 
Sbjct: 594 LELEYETH--YRRFLMPTIRGAETGSKKRYAGLKGDGDKEQIIFKGLESARTDWTPLAQG 651

Query: 954 FQAELFDKFLHG 965
           FQ +L+    HG
Sbjct: 652 FQNQLYQLIFHG 663


>gi|262171755|ref|ZP_06039433.1| DNA polymerase II [Vibrio mimicus MB-451]
 gi|261892831|gb|EEY38817.1| DNA polymerase II [Vibrio mimicus MB-451]
          Length = 787

 Score = 57.0 bits (136), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 52/192 (27%), Positives = 82/192 (42%), Gaps = 25/192 (13%)

Query: 777 AHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIG-KPLELDTDGIW 835
           A K I+NSFYG +   G R++   +A  +T  G +I+   + LIE  G + +  DTD  +
Sbjct: 494 AIKIIMNSFYGVLGSSGCRFFDTRLASSITMRGHEIMIQTKQLIEARGYQVIYGDTDSTF 553

Query: 836 CVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSE 895
             L G     +T +  D            + N  V+  N     Q   + + + Y   S 
Sbjct: 554 VALGG----QYTQQEAD-----------AIGNALVSEIN-----QWWTEHLKQEYALTSI 593

Query: 896 CSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAEL--KGFEIKRRGELKLIKV 953
             +E+E    Y+  ++P  +      KKRYA    DG   ++  KG E  R     L + 
Sbjct: 594 LELEYETH--YRRFLMPTIRGAETGSKKRYAGLKGDGDKEQIIFKGLESARTDWTPLAQR 651

Query: 954 FQAELFDKFLHG 965
           FQ +L+    HG
Sbjct: 652 FQNQLYQLIFHG 663


>gi|407071152|ref|ZP_11101990.1| DNA polymerase II [Vibrio cyclitrophicus ZF14]
          Length = 787

 Score = 57.0 bits (136), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 50/187 (26%), Positives = 81/187 (43%), Gaps = 25/187 (13%)

Query: 777 AHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIG-KPLELDTDGIW 835
           A K I+NSFYG +   G R++   +A  +T  G +I++  ++LIE  G + +  DTD  +
Sbjct: 494 AIKIIMNSFYGVLGSSGCRFFDTRLASSITMRGHEIMKQTKVLIEDKGYQVIYGDTDSTF 553

Query: 836 CVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSE 895
             L GS+         D ++   I +       D   N+  + Y  L   +   YETH  
Sbjct: 554 VSLNGSY---------DQQQADEIGHELAAYINDWWTNHLKETY-NLTSILELEYETH-- 601

Query: 896 CSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAEL--KGFEIKRRGELKLIKV 953
                     Y+  ++P  +      KKRYA   + G   ++  KG E  R     L + 
Sbjct: 602 ----------YRKFLMPTIRGSETGSKKRYAGLINQGDQEKIIFKGLESARTDWTPLAQQ 651

Query: 954 FQAELFD 960
           FQ  L++
Sbjct: 652 FQQTLYE 658


>gi|62736744|gb|AAX97698.1| DNA polymerase [Pyrobaculum arsenaticum]
          Length = 786

 Score = 57.0 bits (136), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 50/238 (21%), Positives = 95/238 (39%), Gaps = 22/238 (9%)

Query: 313 LLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDKNQGECRAKF 372
           +LR +  +++   P + V YN + FDWP+L  RA   G  +      + D+  G  +   
Sbjct: 214 VLRSFVEYVRSFDPDVVVGYNSNNFDWPYLAERAKAVGVPL------RVDRLGGAPQQSV 267

Query: 373 ACHLDCFAWVKRDSY-----LPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAK------- 420
             H         D Y      P+    LK + +    +  +  +   ++   K       
Sbjct: 268 YGHWSVLGRANVDLYNIVDEFPEIK--LKTLDRVAEYFGVMRRDERVLIPGHKIYEYWRD 325

Query: 421 -EKPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQ 479
             K  ++  Y + D  +TY L    + PF+  L+++  +  D+V     G   E +L+  
Sbjct: 326 PSKRPLLRQYVIDDVKSTYGLSEKLL-PFLIQLSSVSGLPLDQVAAASVGNRVEWMLLRY 384

Query: 480 AYKANVICPNKHQSDPEKFYRNHLLESETYIGGHVECLESGVFRSDLPTSFKLDPSAY 537
           AY    + PN+ + + E +    +LE +  + G V  L+      ++   + L P  Y
Sbjct: 385 AYGLGEVAPNREEREYEPYKGAIVLEPKPGLYGDVLVLDFSSMYPNVMMRYNLSPDTY 442


>gi|145592085|ref|YP_001154087.1| DNA polymerase II [Pyrobaculum arsenaticum DSM 13514]
 gi|145283853|gb|ABP51435.1| replicative DNA polymerase I [Pyrobaculum arsenaticum DSM 13514]
          Length = 786

 Score = 57.0 bits (136), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 50/238 (21%), Positives = 95/238 (39%), Gaps = 22/238 (9%)

Query: 313 LLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDKNQGECRAKF 372
           +LR +  +++   P + V YN + FDWP+L  RA   G  +      + D+  G  +   
Sbjct: 214 VLRSFVEYVRSFDPDVVVGYNSNNFDWPYLAERAKAVGVPL------RVDRLGGAPQQSV 267

Query: 373 ACHLDCFAWVKRDSY-----LPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAK------- 420
             H         D Y      P+    LK + +    +  +  +   ++   K       
Sbjct: 268 YGHWSVLGRANVDLYNIVDEFPEIK--LKTLDRVAEYFGVMRRDERVLIPGHKIYEYWRD 325

Query: 421 -EKPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQ 479
             K  ++  Y + D  +TY L    + PF+  L+++  +  D+V     G   E +L+  
Sbjct: 326 PSKRPLLRQYVIDDVRSTYGLSEKLL-PFLIQLSSVSGLPLDQVAAASVGNRVEWMLLRY 384

Query: 480 AYKANVICPNKHQSDPEKFYRNHLLESETYIGGHVECLESGVFRSDLPTSFKLDPSAY 537
           AY    + PN+ + + E +    +LE +  + G V  L+      ++   + L P  Y
Sbjct: 385 AYGLGEVAPNREEREYEPYKGAIVLEPKPGLYGDVLVLDFSSMYPNVMMRYNLSPDTY 442


>gi|262393868|ref|YP_003285722.1| DNA polymerase II [Vibrio sp. Ex25]
 gi|262337462|gb|ACY51257.1| DNA polymerase II [Vibrio sp. Ex25]
          Length = 787

 Score = 57.0 bits (136), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 50/197 (25%), Positives = 84/197 (42%), Gaps = 35/197 (17%)

Query: 777 AHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWC 836
           A K I+NSFYG +   G R++   +A  +T  G +I++  ++LIE+ G          + 
Sbjct: 494 AIKIIMNSFYGVLGSSGCRFFDTRLASSITMRGHEIMKQTKVLIEEQG----------YQ 543

Query: 837 VLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETH--S 894
           V+ G     F          ++++ P   +  D   N        LVD ++  ++ H  S
Sbjct: 544 VIYGDTDSTF----------VSLNRPYSQVEADAVGNQ-------LVDYINSWWQEHLRS 586

Query: 895 ECS----IEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAEL--KGFEIKRRGEL 948
           E +    +E E +  Y+  ++P  +      KKRYA    +G    +  KG E  R    
Sbjct: 587 EYNLTSMLEIEYETHYRRFLMPTIRGAETGSKKRYAGLIGEGKQERIVFKGLESARTDWT 646

Query: 949 KLIKVFQAELFDKFLHG 965
            L + FQ  L+    HG
Sbjct: 647 SLAQKFQNTLYSMIFHG 663


>gi|350530972|ref|ZP_08909913.1| DNA polymerase II, partial [Vibrio rotiferianus DAT722]
          Length = 368

 Score = 57.0 bits (136), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 51/193 (26%), Positives = 80/193 (41%), Gaps = 27/193 (13%)

Query: 777 AHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIG-KPLELDTDGIW 835
           A K I+NSFYG +   G R++   +A  +T  G +I++  ++LIE  G + +  DTD  +
Sbjct: 75  AIKIIMNSFYGVLGSSGCRFFDTRLASSITMRGHEIMKQTKVLIEDKGYQVIYGDTDSTF 134

Query: 836 CVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQY-QTLVDPVSKTYETHS 894
             L G+F +                      + D   N   D   Q   D +   Y  +S
Sbjct: 135 VSLNGAFSQ---------------------ADADNIGNELVDYINQWWSDHLRSEYNLNS 173

Query: 895 ECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAEL--KGFEIKRRGELKLIK 952
              +E+E    Y+  ++P  +      KKRYA    +G    +  KG E  R     L +
Sbjct: 174 ILELEYETH--YRKFLMPTIRGAETGSKKRYAGLIGEGEQERIIFKGLESARTDWTPLAQ 231

Query: 953 VFQAELFDKFLHG 965
            FQ  L+    HG
Sbjct: 232 RFQNTLYQMVFHG 244


>gi|451972637|ref|ZP_21925842.1| DNA polymerase II [Vibrio alginolyticus E0666]
 gi|451931453|gb|EMD79142.1| DNA polymerase II [Vibrio alginolyticus E0666]
          Length = 787

 Score = 56.6 bits (135), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 50/197 (25%), Positives = 84/197 (42%), Gaps = 35/197 (17%)

Query: 777 AHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWC 836
           A K I+NSFYG +   G R++   +A  +T  G +I++  ++LIE+ G          + 
Sbjct: 494 AIKIIMNSFYGVLGSSGCRFFDTRLASSITMRGHEIMKQTKVLIEEQG----------YQ 543

Query: 837 VLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETH--S 894
           V+ G     F          ++++ P   +  D   N        LVD ++  ++ H  S
Sbjct: 544 VIYGDTDSTF----------VSLNRPYSQVEADAVGNQ-------LVDYINSWWQEHLRS 586

Query: 895 ECS----IEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAEL--KGFEIKRRGEL 948
           E +    +E E +  Y+  ++P  +      KKRYA    +G    +  KG E  R    
Sbjct: 587 EYNLTSMLEIEYETHYRRFLMPTIRGAETGSKKRYAGLIGEGEQERIVFKGLESARTDWT 646

Query: 949 KLIKVFQAELFDKFLHG 965
            L + FQ  L+    HG
Sbjct: 647 SLAQKFQNTLYSMIFHG 663


>gi|448089833|ref|XP_004196912.1| Piso0_004142 [Millerozyma farinosa CBS 7064]
 gi|448094173|ref|XP_004197943.1| Piso0_004142 [Millerozyma farinosa CBS 7064]
 gi|359378334|emb|CCE84593.1| Piso0_004142 [Millerozyma farinosa CBS 7064]
 gi|359379365|emb|CCE83562.1| Piso0_004142 [Millerozyma farinosa CBS 7064]
          Length = 1453

 Score = 56.6 bits (135), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 74/309 (23%), Positives = 131/309 (42%), Gaps = 66/309 (21%)

Query: 771  YDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIG-KPLEL 829
            YD  Q A K   NS YG +    +R+Y+  +A +VT  G +I+ + R L E IG + +  
Sbjct: 921  YDIKQQALKLTANSMYGCLGYVNSRFYAKPLAMLVTNKGREILMDTRQLAESIGLRVVYG 980

Query: 830  DTDGIWCVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKT 889
            DTD +                +DLK+ + I         +  +   N++Y+ L       
Sbjct: 981  DTDSVM----------IDTGVEDLKEAIKIG--------EEFKVQVNERYKLL------- 1015

Query: 890  YETHSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFN--------DDGTLAELKGFE 941
                     E ++D  +K ++L A        KK+YA  N         + T+ E+KG +
Sbjct: 1016 ---------EIDIDNVFKRLLLHA--------KKKYAAMNVSIDKTTGKEKTILEVKGLD 1058

Query: 942  IKRRGELKLIKVFQAELFDKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSEL-ID 1000
            ++RR   +L K     + +K L  +  E+   +V        + L+ + K I ++E+ +D
Sbjct: 1059 MRRREYCQLSKDISTYVLEKILSQADPEQALFSV-------YEYLEEEAKKIRNNEIPVD 1111

Query: 1001 YISESSTMSKSLADYGEQKSC-AVTTARRLSDFLGDTMVKDKGLRCQYIV---ACEPQGT 1056
                ++ +SK   +Y   K+   V  A +L        V   G    Y++   A E   +
Sbjct: 1112 KFKINTRLSKDPNNYPNGKTMPPVQAALKLRK---QGKVIKAGSVITYVITAKASEDDSS 1168

Query: 1057 PVSERAVPV 1065
              ++RAVP+
Sbjct: 1169 SQADRAVPI 1177


>gi|417951071|ref|ZP_12594181.1| DNA polymerase II [Vibrio splendidus ATCC 33789]
 gi|342805419|gb|EGU40685.1| DNA polymerase II [Vibrio splendidus ATCC 33789]
          Length = 787

 Score = 56.6 bits (135), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 50/191 (26%), Positives = 85/191 (44%), Gaps = 25/191 (13%)

Query: 777 AHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIG-KPLELDTDGIW 835
           A K I+NSFYG +   G R++   +A  +T  G +I++  ++LIE  G + +  DTD  +
Sbjct: 494 AIKIIMNSFYGVLGSSGCRFFDTRLASSITMRGHEIMKQTKVLIEDKGYQVIYGDTDSTF 553

Query: 836 CVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSE 895
             L GS+         D ++   I +  V           N+ +    + + +TY   S 
Sbjct: 554 VSLNGSY---------DQEQADEIGHQLVAY--------INNWW---TEHLKETYNLTSI 593

Query: 896 CSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAEL--KGFEIKRRGELKLIKV 953
             +E+E    Y+  ++P  +      KKRYA   + G   ++  KG E  R     L + 
Sbjct: 594 LELEYETH--YRKFLMPTIRGSETGSKKRYAGLINQGDQEKIIFKGLESARTDWTPLAQQ 651

Query: 954 FQAELFDKFLH 964
           FQ  L++   H
Sbjct: 652 FQQTLYEMVFH 662


>gi|421521895|ref|ZP_15968546.1| DNA polymerase II [Pseudomonas putida LS46]
 gi|402754503|gb|EJX14986.1| DNA polymerase II [Pseudomonas putida LS46]
          Length = 786

 Score = 56.6 bits (135), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 66/262 (25%), Positives = 106/262 (40%), Gaps = 60/262 (22%)

Query: 715 GICMRENSFYVDTVRSFRDRRYEY---KGLNKVWKGKLSEAKASGNSIKIQEAQDMVVLY 771
           G+ + +++  V+  R  R  R ++     + +VW+G+   AK  GN+             
Sbjct: 442 GLRLPDDAHSVEGFRGGRFSRTQHCLPAIVERVWQGR-EAAKREGNA------------- 487

Query: 772 DSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIG-KPLELD 830
             L  A K I+N+FYG +   G R++   +A  +T  G +I++  R LIE  G   +  D
Sbjct: 488 -PLSQALKIIMNAFYGVLGSSGCRFFDPRLASSITMRGHQIMRQTRSLIEACGYDVIYGD 546

Query: 831 TDGIWCVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTY 890
           TD  +  L G+  E                        D AR       + LV  V++ +
Sbjct: 547 TDSTFVWLKGAHAE-----------------------ADAARIG-----RELVAKVNQWW 578

Query: 891 ETH--------SECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAE---LKG 939
           + H        S   ++FEV   Y+  ++P  +      KKRYA        AE    KG
Sbjct: 579 QAHLHETMNLQSALELQFEVH--YRRFLMPTIRGTDEGSKKRYAGLVQRADGAEEMVYKG 636

Query: 940 FEIKRRGELKLIKVFQAELFDK 961
            E  R     L + FQ EL+ +
Sbjct: 637 LESVRTDWSPLARQFQQELYGR 658


>gi|219852338|ref|YP_002466770.1| DNA polymerase B region [Methanosphaerula palustris E1-9c]
 gi|219546597|gb|ACL17047.1| DNA polymerase B region [Methanosphaerula palustris E1-9c]
          Length = 795

 Score = 56.6 bits (135), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 64/225 (28%), Positives = 89/225 (39%), Gaps = 35/225 (15%)

Query: 764 AQDMVVLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKI 823
             D  +LYD  Q A K I+NS+YG       R Y  E+   VT  G  II++ R +IE +
Sbjct: 478 GSDEYLLYDLQQNALKVIMNSYYGVSGYVRFRLYDREIGAAVTAVGRAIIEHTRQVIEGM 537

Query: 824 G-KPLELDTDGIWCVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTL 882
           G + L  DTD     LP    E      + +++KL  SY      V     N    Y   
Sbjct: 538 GYRVLYGDTDSCMIQLPPGDKETTIRNARAIEQKLNESYGLFSRTV----LNAEKHY--- 590

Query: 883 VDPVSKTYETHSECSIEFEVDGPYKAMILPASKEEGILIKKRYA---VFNDDGTLAELK- 938
                         SI+FE           A K      KKRYA   V+ +   + E+  
Sbjct: 591 -------------FSIKFE---KIYLRFFQAGK------KKRYAGHLVWKEGKDVDEIDI 628

Query: 939 -GFEIKRRGELKLIKVFQAELFDKFLHGSTIEECYSAVAAVANRW 982
            GFEIKR    ++ K+ Q  + +  L G       S +  V  R+
Sbjct: 629 VGFEIKRSDSPQITKIVQRRVMEMILSGEEYSAVKSYLGDVIRRY 673


>gi|429212202|ref|ZP_19203367.1| DNA polymerase II [Pseudomonas sp. M1]
 gi|428156684|gb|EKX03232.1| DNA polymerase II [Pseudomonas sp. M1]
          Length = 787

 Score = 56.6 bits (135), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 67/249 (26%), Positives = 107/249 (42%), Gaps = 51/249 (20%)

Query: 727 TVRSFRDRRYEYKG------LNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHKC 780
           +V  FR  R+          + +VW+G+   AK  GN                L  A K 
Sbjct: 452 SVEGFRGARFSRSRHCLPAIVERVWQGR-EAAKREGNK--------------PLSQALKI 496

Query: 781 ILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIG-KPLELDTDGIWCVLP 839
           I+N+FYG +   G R++   +A  +T  G +I++  R LIE  G + +  DTD  +  L 
Sbjct: 497 IMNAFYGVLGSSGCRFFDPRLASSITMRGHQIMRRTRELIEAQGHQVIYGDTDSTFVWLG 556

Query: 840 GSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIE 899
           G+  E      + + + L            V R N     Q   + + +TY+  S   ++
Sbjct: 557 GAHAEA---DAERIGRAL------------VQRIN-----QWWKEHLRETYDLESALELQ 596

Query: 900 FEVDGPYKAMILPASK--EEGILIKKRYA--VFNDDGTLAEL-KGFEIKRRGELKLIKVF 954
           +E    Y+  ++P  +  EEG   KKRYA  V   DG+   + KG E  R     L + F
Sbjct: 597 YETH--YQRFLMPTVRGAEEG--SKKRYAGLVRRADGSEEMVFKGLETVRTDWSPLAQRF 652

Query: 955 QAELFDKFL 963
           Q EL+++  
Sbjct: 653 QQELYERIF 661


>gi|68525479|gb|AAY98790.1| family B-type DNA polymerase [Staphylothermus marinus]
          Length = 801

 Score = 56.6 bits (135), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 103/502 (20%), Positives = 199/502 (39%), Gaps = 107/502 (21%)

Query: 66  IDLYFVSQDGS-TFKSKYKFRPYFYAATKEKMEMDVEAYLRRRY---ESQIADIEILEKE 121
           I ++ +++DG        +FRPYFYA  K+K+ ++  A   R Y   +S I  +E +EK+
Sbjct: 25  IIIWGITRDGRRVLLRDRRFRPYFYAILKDKVNIEDLARKIRTYSDPKSPIIGVEPVEKK 84

Query: 122 DLDLKNHLSGLHKSYLKISFDTVQQLMDVKKDLLHVVERNQAKFDAAEAYESILTGKREQ 181
                    G   S LKI     + +   ++ +  + E                      
Sbjct: 85  YF-------GRKVSALKIITMIPEYVRKYREKIKSLPE---------------------- 115

Query: 182 RPQDFLDCIVDLREYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLLEKRVDLLQRAEVHV 241
                   ++++ E D+ + IR+ ID+D+R   W                        HV
Sbjct: 116 --------VLEVVEADIRFSIRYIIDHDLRPCGW------------------------HV 143

Query: 242 CAFDIETTKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIE--DLEYTPKPEFE 299
               +E  K P+   DA+Y+II  I  +   +  L  +   +  DIE  +   TP+P+ +
Sbjct: 144 AEV-VEVPKKPIYRVDAEYEIIGDIKPL---EQTLQPDLRIIAFDIEVYNKSGTPRPQTD 199

Query: 300 GY--------------FKVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETR 345
                           F     +++I +   +  +++   P I V YN D FDWP+L  R
Sbjct: 200 PIIIIGIMNNNGDIKQFLANKYDDKISVEE-FVNYVKTFDPDIIVGYNTDGFDWPYLIER 258

Query: 346 AAHHGFKMSEELGFQCDKNQGECRAKFACHLDCFAWVKRDSY-----LPQ-GSQGLKAVT 399
           + + G K+         +     R     H+     +  D Y     +P+   + L+ V 
Sbjct: 259 SKYIGVKLD-----VTRRVGATPRTSTYGHISVPGRLNTDLYHFAEEIPEVKVKSLENVA 313

Query: 400 KAKLGY----DPLEVNPEDMVRF---AKEKPQMMASYSVSDAVATYYLYMTYVHPFIFSL 452
           +  LG     + + +   D+ ++    K +P+++  Y++ D  +TY L   ++ PF   L
Sbjct: 314 EY-LGVMKKSERVIIEYIDIPKYWDDEKLRPKLL-QYNIDDVKSTYGLAEKFL-PFAMQL 370

Query: 453 ATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVICPNKHQSDPEKFYRNHLLESETYIGG 512
           + I  +  D+V     G   E  LM +A++   + PN+ +   E +    +L+    +  
Sbjct: 371 SNITGLPLDQVGAASVGFRLEWYLMREAFRYGELVPNRVERAAESYRGAVVLKPVKGVHE 430

Query: 513 HVECLESGVFRSDLPTSFKLDP 534
           ++  L+      ++   + + P
Sbjct: 431 NIAVLDFSSMYPNIMIKYNVGP 452



 Score = 44.7 bits (104), Expect = 0.56,   Method: Compositional matrix adjust.
 Identities = 75/307 (24%), Positives = 124/307 (40%), Gaps = 68/307 (22%)

Query: 770  LYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIG-KPLE 828
            L D  Q A K + N+ YGY+    ARWY  E A  VT  G + I++A  L  K+G K + 
Sbjct: 514  LLDERQKAVKVLANATYGYMGWIHARWYCRECAEAVTAWGRQTIKSAIELARKLGLKVIY 573

Query: 829  LDTDGIWCVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSK 888
             DTD +             F T D                        D+ + L++ +  
Sbjct: 574  GDTDSL-------------FVTYD-----------------------KDKVEKLIELI-- 595

Query: 889  TYETHSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGEL 948
                 ++   E ++D  YK +    +       KKRYA   +DG + ++ GFE  R    
Sbjct: 596  ----QTKLGFEIKIDKIYKRVFFTEA-------KKRYAGLLEDGRI-DIVGFEAVRGDWA 643

Query: 949  KLIKVFQAELFDKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTM 1008
            ++ K  Q ++ +  L  ++I++    V  V      + D +   I   +LI +     T+
Sbjct: 644  EIAKEVQEKVTEILLKENSIDKAIEYVRQV------IADLKAGKIPLDKLIIW----KTL 693

Query: 1009 SKSLADYGEQKSCAVTTARRLSDFLGDTMVKDKGLRCQYIVACEPQGTPVSERAVPVAIF 1068
            SK + +Y    +  V  A++L          DK     Y++     G  +S RA P  IF
Sbjct: 694  SKRIEEYSVD-APHVVAAKKLIKAGIKVSTNDK---IGYVIL--KGGGKISSRAEPY-IF 746

Query: 1069 ETDAEIM 1075
              D +++
Sbjct: 747  VKDPKLI 753


>gi|126465787|ref|YP_001040896.1| DNA polymerase II [Staphylothermus marinus F1]
 gi|126014610|gb|ABN69988.1| replicative DNA polymerase I [Staphylothermus marinus F1]
          Length = 801

 Score = 56.6 bits (135), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 103/502 (20%), Positives = 199/502 (39%), Gaps = 107/502 (21%)

Query: 66  IDLYFVSQDGS-TFKSKYKFRPYFYAATKEKMEMDVEAYLRRRY---ESQIADIEILEKE 121
           I ++ +++DG        +FRPYFYA  K+K+ ++  A   R Y   +S I  +E +EK+
Sbjct: 25  IIIWGITRDGRRVLLRDRRFRPYFYAILKDKVNIEDLARKIRTYSDPKSPIIGVEPVEKK 84

Query: 122 DLDLKNHLSGLHKSYLKISFDTVQQLMDVKKDLLHVVERNQAKFDAAEAYESILTGKREQ 181
                    G   S LKI     + +   ++ +  + E                      
Sbjct: 85  YF-------GRKVSALKIITMIPEYVRKYREKIKSLPE---------------------- 115

Query: 182 RPQDFLDCIVDLREYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLLEKRVDLLQRAEVHV 241
                   ++++ E D+ + IR+ ID+D+R   W                        HV
Sbjct: 116 --------VLEVVEADIRFSIRYIIDHDLRPCGW------------------------HV 143

Query: 242 CAFDIETTKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIE--DLEYTPKPEFE 299
               +E  K P+   DA+Y+II  I  +   +  L  +   +  DIE  +   TP+P+ +
Sbjct: 144 AEV-VEVPKKPIYRVDAEYEIIGDIKPL---EQTLQPDLRIIAFDIEVYNKSGTPRPQTD 199

Query: 300 GY--------------FKVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETR 345
                           F     +++I +   +  +++   P I V YN D FDWP+L  R
Sbjct: 200 PIIIIGIMNNNGDIKQFLANKYDDKISVEE-FVNYVKTFDPDIIVGYNTDGFDWPYLIER 258

Query: 346 AAHHGFKMSEELGFQCDKNQGECRAKFACHLDCFAWVKRDSY-----LPQ-GSQGLKAVT 399
           + + G K+         +     R     H+     +  D Y     +P+   + L+ V 
Sbjct: 259 SKYIGVKLD-----VTRRVGATPRTSTYGHISVPGRLNTDLYHFAEEIPEVKVKSLENVA 313

Query: 400 KAKLGY----DPLEVNPEDMVRF---AKEKPQMMASYSVSDAVATYYLYMTYVHPFIFSL 452
           +  LG     + + +   D+ ++    K +P+++  Y++ D  +TY L   ++ PF   L
Sbjct: 314 EY-LGVMKKSERVIIEYIDIPKYWDDEKLRPKLL-QYNIDDVKSTYGLAEKFL-PFAMQL 370

Query: 453 ATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVICPNKHQSDPEKFYRNHLLESETYIGG 512
           + I  +  D+V     G   E  LM +A++   + PN+ +   E +    +L+    +  
Sbjct: 371 SNITGLPLDQVGAASVGFRLEWYLMREAFRYGELVPNRVERAAESYRGAVVLKPVKGVHE 430

Query: 513 HVECLESGVFRSDLPTSFKLDP 534
           ++  L+      ++   + + P
Sbjct: 431 NIAVLDFSSMYPNIMIKYNVGP 452



 Score = 44.7 bits (104), Expect = 0.53,   Method: Compositional matrix adjust.
 Identities = 75/307 (24%), Positives = 124/307 (40%), Gaps = 68/307 (22%)

Query: 770  LYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIG-KPLE 828
            L D  Q A K + N+ YGY+    ARWY  E A  VT  G + I++A  L  K+G K + 
Sbjct: 514  LLDERQKAVKVLANATYGYMGWIHARWYCRECAEAVTAWGRQTIKSAIELARKLGLKVIY 573

Query: 829  LDTDGIWCVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSK 888
             DTD +             F T D                        D+ + L++ +  
Sbjct: 574  GDTDSL-------------FVTYD-----------------------KDKVEKLIELI-- 595

Query: 889  TYETHSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGEL 948
                 ++   E ++D  YK +    +       KKRYA   +DG + ++ GFE  R    
Sbjct: 596  ----QTKLGFEIKIDKIYKRVFFTEA-------KKRYAGLLEDGRI-DIVGFEAVRGDWA 643

Query: 949  KLIKVFQAELFDKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTM 1008
            ++ K  Q ++ +  L  ++I++    V  V      + D +   I   +LI +     T+
Sbjct: 644  EIAKEVQEKVTEILLKENSIDKAIEYVRQV------IADLKAGKIPLDKLIIW----KTL 693

Query: 1009 SKSLADYGEQKSCAVTTARRLSDFLGDTMVKDKGLRCQYIVACEPQGTPVSERAVPVAIF 1068
            SK + +Y    +  V  A++L          DK     Y++     G  +S RA P  IF
Sbjct: 694  SKRIEEYSVD-APHVVAAKKLIKAGIKVSTNDK---IGYVIL--KGGGKISSRAEPY-IF 746

Query: 1069 ETDAEIM 1075
              D +++
Sbjct: 747  VKDPKLI 753


>gi|359416073|ref|ZP_09208444.1| DNA-directed DNA polymerase [Candidatus Haloredivivus sp. G17]
 gi|358033565|gb|EHK02099.1| DNA-directed DNA polymerase [Candidatus Haloredivivus sp. G17]
          Length = 383

 Score = 56.6 bits (135), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 61/231 (26%), Positives = 87/231 (37%), Gaps = 57/231 (24%)

Query: 716 ICMRENSFYVDTVRSFRDRRYEYKGLNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQ 775
            C  E  F+ + V +    RY  K   K                 ++E  +      S Q
Sbjct: 78  FCQDEQGFFPELVENLVSSRYSIKEKMK----------------NMEEGSEKYSSLYSRQ 121

Query: 776 LAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLEL-DTDGI 834
            A K + NSFYGY+   GARWYS E A   TY G K IQ+     E++G  +   DTD  
Sbjct: 122 QAQKILANSFYGYLGYSGARWYSREAAEATTYLGRKYIQDTIETAEEMGFEMVYGDTD-- 179

Query: 835 WCVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHS 894
                                        VML  D    N  +     ++ V+       
Sbjct: 180 ----------------------------SVMLRKD----NIEESMDGFLEEVNSQLPKF- 206

Query: 895 ECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRR 945
              +E E +G +K      SK+ G   KK+YA+ ++   L ++ GFE  RR
Sbjct: 207 ---MELEFEGLFKRGFF-TSKDSGEGAKKKYALIDEKANL-KITGFEQVRR 252


>gi|254509393|ref|ZP_05121477.1| DNA polymerase family B, exonuclease domain [Vibrio
           parahaemolyticus 16]
 gi|219547685|gb|EED24726.1| DNA polymerase family B, exonuclease domain [Vibrio
           parahaemolyticus 16]
          Length = 787

 Score = 56.6 bits (135), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 48/203 (23%), Positives = 85/203 (41%), Gaps = 37/203 (18%)

Query: 777 AHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIG-KPLELDTDGIW 835
           A K I+NSFYG +   G R++   +A  +T  G +I++  + LIE+ G + +  DTD  +
Sbjct: 494 AIKIIMNSFYGVLGSSGCRFFDTRLASSITMRGHEIMKQTKKLIEEQGYQVIYGDTDSTF 553

Query: 836 CVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSE 895
             L G++                            ++ + +     LVD +++ +  H +
Sbjct: 554 VSLNGAY----------------------------SQQDADQIGLALVDHINRWWTEHLK 585

Query: 896 ------CSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAEL--KGFEIKRRGE 947
                   +E E +  Y+  ++P  + +    KKRYA    +G    +  KG E  R   
Sbjct: 586 EQYNLTSILELEYETHYRRFLMPTIRGQETGSKKRYAGLIGEGDNERIVFKGLESARTDW 645

Query: 948 LKLIKVFQAELFDKFLHGSTIEE 970
             L + FQ+ L+    HG    E
Sbjct: 646 TPLAQRFQSTLYSMVFHGENPSE 668


>gi|372275979|ref|ZP_09512015.1| DNA polymerase II [Pantoea sp. SL1_M5]
 gi|390436807|ref|ZP_10225345.1| DNA polymerase II [Pantoea agglomerans IG1]
          Length = 784

 Score = 56.6 bits (135), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 80/355 (22%), Positives = 129/355 (36%), Gaps = 68/355 (19%)

Query: 725  VDTVRSFRDRRYEYKG------LNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAH 778
             D++  FR+ R+          + ++W G+   AK   N                L  A 
Sbjct: 448  ADSIEGFREARFSRHTHCLPAIVEQIWLGR-EAAKKQNNQ--------------PLSQAL 492

Query: 779  KCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIG-KPLELDTDGIWCV 837
            K I+N+FYG +     R++   +A  +T  G  I+Q  R LIE  G   +  DTD  +  
Sbjct: 493  KIIMNAFYGVLGTSACRFFDPRLASSITLRGHAIMQQTRTLIEAEGYDVIYGDTDSTFVW 552

Query: 838  LPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECS 897
            L  +  E        + ++L       +  V+    +   Q Q L   +   YE H    
Sbjct: 553  LKSAHSEE---DAAAIGQQL-------VQKVNAWWRDHLQQTQGLTSTLELEYENH---- 598

Query: 898  IEFEVDGPYKAMILPASKEEGILIKKRYAVFNDD--GTLAELKGFEIKRRGELKLIKVFQ 955
                    +   ++P  +      KKRYA    D  G     KG E  R     L K FQ
Sbjct: 599  --------FCRFLMPTIRGAEQGSKKRYAGLIRDAAGERMVFKGLESVRTDWTPLAKAFQ 650

Query: 956  AELFDKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLADY 1015
             +L+ +  H                 W D +      +   EL D +     + + L +Y
Sbjct: 651  QQLYHRIFHRQP--------------WQDYIRTTVAQLLAGELDDQLIYKKRLRRPLKEY 696

Query: 1016 GEQKSCAVTTARRLSD----FLGDTMVKDKGLRCQYIVACE-PQGTPVSERAVPV 1065
             E+       A RL+D     L   +    G R +Y++A   P+  P+  R+ P+
Sbjct: 697  -ERNVPPHVRAARLADEHNRKLNRPLQYQNGGRIRYVIATAGPE--PLEARSTPL 748


>gi|398795236|ref|ZP_10555151.1| DNA polymerase elongation subunit (family B) [Pantoea sp. YR343]
 gi|398207067|gb|EJM93823.1| DNA polymerase elongation subunit (family B) [Pantoea sp. YR343]
          Length = 786

 Score = 56.6 bits (135), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 72/316 (22%), Positives = 119/316 (37%), Gaps = 61/316 (19%)

Query: 725  VDTVRSFRDRRYEYKG------LNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAH 778
             D+V  FR+ R+  +       + ++W+G+  EA    N+  + +A              
Sbjct: 450  ADSVPGFRNARFSRETHCLPAIVEQIWQGR--EAAKRDNNKPLSQAL------------- 494

Query: 779  KCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIG-KPLELDTDGIWCV 837
            K I+N+FYG +     R++   +A  +T  G  I+Q  R LIE  G   +  DTD  +  
Sbjct: 495  KIIMNAFYGVLGTSACRFFDPRLASSITLRGHAIMQQTRELIEAEGFDVIYGDTDSTFVW 554

Query: 838  LPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECS 897
            L G+  E    +   + + L                  N  +Q     +  TY   S   
Sbjct: 555  LKGARSEA---EATAIGRHLA--------------EQVNGWWQ---QHLQSTYGLESALE 594

Query: 898  IEFEVDGPYKAMILPASKEEGILIKKRYA--VFNDDGTLAELKGFEIKRRGELKLIKVFQ 955
            +E+E    +   ++P  +      KKRYA  + +D G     KG E  R     L + FQ
Sbjct: 595  LEYETH--FSRFLMPTIRGAEQGSKKRYAGMIRSDCGERLVFKGLESVRTDWTPLAQQFQ 652

Query: 956  AELFDKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLADY 1015
              L+ +   G                W D +      +   EL D +     + ++L DY
Sbjct: 653  QNLYGRIFRGEP--------------WQDYIRETVAQLLAGELDDQLVYKKRLRRALKDY 698

Query: 1016 GEQKSCAVTTARRLSD 1031
             E+       A RL+D
Sbjct: 699  -ERNVPPHVRAARLAD 713



 Score = 46.2 bits (108), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 56/261 (21%), Positives = 107/261 (40%), Gaps = 24/261 (9%)

Query: 302 FKVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMS------- 354
           F++  V++  +LL    A  +  +P + + +N   FD   L+  A  +G  +        
Sbjct: 195 FELIYVDSRPQLLEQLNAWFERHEPDVIIGWNVVQFDLRVLQKHADRYGIPLRLGRQKQA 254

Query: 355 ---EELGFQCDKNQGECRAKFAC-HLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEV 410
               E GF+      +   +     +D      + ++    S  L+AV++  LG      
Sbjct: 255 LEWREHGFKPGVFFAQATGRLIIDGIDAL----KSAFWDFPSFSLEAVSRQLLGEGKAID 310

Query: 411 NPEDMV-----RFAKEKPQMMASYSVSDA-VATYYLYMTYVHPFIFSLATIIPMSPDEVL 464
           NP D +     RFA +KP  +A Y++ D  + T     T + PF+   AT+  ++ D   
Sbjct: 311 NPWDRMEEINWRFANDKP-ALAKYNLKDCELVTRIFQHTAIMPFLLERATVNGLAVDR-- 367

Query: 465 RKGSGTLCEMLLMVQAYKANVICPNKHQSDPEKFYRNHLLESETYIGGHVECLESGVFRS 524
             GS      L + + ++A  + PN  +  PE     ++++S   +   V  L+      
Sbjct: 368 HGGSVAAFGHLYIPRMHRAGFVAPNLGEVAPEASPGGYVMDSRPGLYDSVLVLDYKSLYP 427

Query: 525 DLPTSFKLDPSAYEQLLNNLD 545
            +  +F +DP    + L + D
Sbjct: 428 SIIRTFLIDPVGLVEGLAHPD 448


>gi|386012818|ref|YP_005931095.1| PolB [Pseudomonas putida BIRD-1]
 gi|313499524|gb|ADR60890.1| PolB [Pseudomonas putida BIRD-1]
          Length = 786

 Score = 56.6 bits (135), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 65/254 (25%), Positives = 106/254 (41%), Gaps = 44/254 (17%)

Query: 715 GICMRENSFYVDTVRSFRDRRYEY---KGLNKVWKGKLSEAKASGNSIKIQEAQDMVVLY 771
           G+ + +++  V+  R  R  R ++     + +VW+G+   AK  GN+             
Sbjct: 442 GLRLPDDAHSVEGFRGGRFSRTQHCLPAIVERVWQGR-EAAKREGNA------------- 487

Query: 772 DSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIG-KPLELD 830
             L  A K I+N+FYG +   G R++   +A  +T  G +I++  R LIE  G   +  D
Sbjct: 488 -PLSQALKIIMNAFYGVLGSSGCRFFDPRLASSITMRGHQIMRQTRSLIEACGYDVIYGD 546

Query: 831 TDGIWCVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTY 890
           TD  +  L G+  E        + ++L            VA+ N   Q       + +T 
Sbjct: 547 TDSTFVWLKGAHAEE---DAARIGREL------------VAKVNQWWQAH-----LHETM 586

Query: 891 ETHSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAE---LKGFEIKRRGE 947
              S   ++FEV   Y+  ++P  +      KKRYA        AE    KG E  R   
Sbjct: 587 NLQSALELQFEVH--YRRFLMPTIRGTDEGSKKRYAGLVQRADGAEEMVYKGLESVRTDW 644

Query: 948 LKLIKVFQAELFDK 961
             L + FQ EL+ +
Sbjct: 645 SPLARQFQQELYGR 658


>gi|359442094|ref|ZP_09231973.1| DNA polymerase II [Pseudoalteromonas sp. BSi20429]
 gi|358036034|dbj|GAA68222.1| DNA polymerase II [Pseudoalteromonas sp. BSi20429]
          Length = 780

 Score = 56.6 bits (135), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 52/195 (26%), Positives = 82/195 (42%), Gaps = 23/195 (11%)

Query: 774 LQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDG 833
           L  A K I+NS YG +  KG R+Y   ++  +T  G +I+   +  IE++G         
Sbjct: 488 LSQAIKIIMNSLYGVLGSKGCRFYDPRLSSSITLRGHEIMLQTKKWIEELG--------- 538

Query: 834 IWCVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETH 893
            + V+ G     F     DL         C  + V +A+  T D     ++ + +T+   
Sbjct: 539 -YSVIYGDTDSTFIKLDDDLTHD-----ECNEIGVFLAKKITTD----WINEIKQTHNLT 588

Query: 894 SECSIEFEVDGPYKAMILPASKEEGILIKKRYA--VFNDDGTLAELKGFEIKRRGELKLI 951
           S   IEFE    Y    LP  + + +  KKRY   +   + +    KG E  R    KL 
Sbjct: 589 SHLEIEFE--SLYSPFFLPTIRGKLVGSKKRYVGKLIKPNESKLVFKGLETVRSDWTKLA 646

Query: 952 KVFQAELFDKFLHGS 966
           + FQ +LF     G+
Sbjct: 647 QQFQFDLFTSLFDGN 661


>gi|424046731|ref|ZP_17784293.1| DNA polymerase II [Vibrio cholerae HENC-03]
 gi|408884791|gb|EKM23519.1| DNA polymerase II [Vibrio cholerae HENC-03]
          Length = 787

 Score = 56.2 bits (134), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 51/198 (25%), Positives = 84/198 (42%), Gaps = 37/198 (18%)

Query: 777 AHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIG-KPLELDTDGIW 835
           A K I+NSFYG +   G R++   +A  +T  G +I++  ++LIE  G + +  DTD  +
Sbjct: 494 AIKIIMNSFYGVLGSSGCRFFDTRLASSITMRGHEIMKQTKVLIEDKGYQVIYGDTDSTF 553

Query: 836 CVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETH-- 893
             L G++ +                      + D   N        LVD +++ +  H  
Sbjct: 554 VSLNGAYNQT---------------------DADKIGNE-------LVDYINQWWSNHLR 585

Query: 894 SECS----IEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAEL--KGFEIKRRGE 947
           SE +    +E E +  Y+  ++P  +      KKRYA    +G    +  KG E  R   
Sbjct: 586 SEYNLNSILELEYETHYRKFLMPTIRGAETGSKKRYAGLIGEGEQERIIFKGLESARTDW 645

Query: 948 LKLIKVFQAELFDKFLHG 965
             L + FQ  L+    HG
Sbjct: 646 TPLAQRFQNTLYQMIFHG 663


>gi|430809661|ref|ZP_19436776.1| DNA polymerase II [Cupriavidus sp. HMR-1]
 gi|429497878|gb|EKZ96397.1| DNA polymerase II [Cupriavidus sp. HMR-1]
          Length = 789

 Score = 56.2 bits (134), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 66/251 (26%), Positives = 106/251 (42%), Gaps = 49/251 (19%)

Query: 725 VDTVRSFRDRRYEYKG------LNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAH 778
            D+V  FR  R+          + +VW+G+   AK   N                L  A 
Sbjct: 450 ADSVPGFRGARFSRTKHCLPAIVARVWQGR-EAAKRDKNK--------------PLSQAL 494

Query: 779 KCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIG-KPLELDTDGIWCV 837
           K I+N+FYG +   G R++   +A  +T  G +I++  R LIE  G + +  DTD  +  
Sbjct: 495 KIIMNAFYGVLGSSGCRFFDPRLASSITMRGHEIMRQTRALIEARGYEVIYGDTDSTFVW 554

Query: 838 LPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECS 897
           L  +  E        + + L ++Y              ND ++   D + +TY   S   
Sbjct: 555 LRRARSEA---DAAQIGRSL-VAY-------------VNDWWR---DHLWQTYSLESALE 594

Query: 898 IEFEVDGPYKAMILPASKEEGILIKKRYA--VFNDDGTLAEL--KGFEIKRRGELKLIKV 953
           ++FE    ++  ++P  +   +  KKRYA  V   DGT AE+  KG E  R     L + 
Sbjct: 595 LQFETH--FRRFLMPTIRGADLGSKKRYAGQVMRADGT-AEMVFKGLETVRTDWSPLAQQ 651

Query: 954 FQAELFDKFLH 964
           FQ  L+ K  +
Sbjct: 652 FQQTLYAKIFN 662


>gi|433658055|ref|YP_007275434.1| DNA polymerase II [Vibrio parahaemolyticus BB22OP]
 gi|432508743|gb|AGB10260.1| DNA polymerase II [Vibrio parahaemolyticus BB22OP]
          Length = 787

 Score = 56.2 bits (134), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 65/281 (23%), Positives = 105/281 (37%), Gaps = 42/281 (14%)

Query: 777  AHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIG-KPLELDTDGIW 835
            A K I+NSFYG +   G R++   +A  +T  G +I++  ++LIE  G + +  DTD  +
Sbjct: 494  AIKIIMNSFYGVLGSSGCRFFDTRLASSITMRGHEIMKQTKVLIENKGYQVIYGDTDSTF 553

Query: 836  CVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSE 895
              L GS+ +       D      + Y              N  +Q   + +   Y   S 
Sbjct: 554  VSLNGSYSQ----AEADEVGNHLVEY-------------INSWWQ---EHLRAEYNLTSM 593

Query: 896  CSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAEL--KGFEIKRRGELKLIKV 953
              IE+E    Y+  ++P  +      KKRYA    +G    +  KG E  R     L + 
Sbjct: 594  LEIEYETH--YRKFLMPTIRGAETGSKKRYAGLIGEGEQERIVFKGLESARTDWTPLAQK 651

Query: 954  FQAELFDKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLA 1013
            FQ  L+    HG    +    V    N              + E  D +     + + L 
Sbjct: 652  FQNTLYRMVFHGEDPSDYVREVVEKTN--------------NGEFDDQLVYQKRLRRKLH 697

Query: 1014 DYGEQKSCAVTTARRLSDF---LGDTMVKDKGLRCQYIVAC 1051
            +Y +     V  AR   D    LG  +      R +Y++  
Sbjct: 698  EYQKNIPPQVRAARLADDINAKLGRPLQYQNRGRIEYLITL 738


>gi|28898720|ref|NP_798325.1| DNA polymerase II [Vibrio parahaemolyticus RIMD 2210633]
 gi|260877283|ref|ZP_05889638.1| DNA polymerase II [Vibrio parahaemolyticus AN-5034]
 gi|417319525|ref|ZP_12106083.1| DNA polymerase II [Vibrio parahaemolyticus 10329]
 gi|28806938|dbj|BAC60209.1| DNA polymerase II [Vibrio parahaemolyticus RIMD 2210633]
 gi|308090295|gb|EFO39990.1| DNA polymerase II [Vibrio parahaemolyticus AN-5034]
 gi|328474715|gb|EGF45520.1| DNA polymerase II [Vibrio parahaemolyticus 10329]
          Length = 787

 Score = 56.2 bits (134), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 65/281 (23%), Positives = 105/281 (37%), Gaps = 42/281 (14%)

Query: 777  AHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIG-KPLELDTDGIW 835
            A K I+NSFYG +   G R++   +A  +T  G +I++  ++LIE  G + +  DTD  +
Sbjct: 494  AIKIIMNSFYGVLGSSGCRFFDTRLASSITMRGHEIMKQTKVLIENKGYQVIYGDTDSTF 553

Query: 836  CVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSE 895
              L GS+ +       D      + Y              N  +Q   + +   Y   S 
Sbjct: 554  VSLNGSYSQ----AEADEVGNHLVEY-------------INSWWQ---EHLRAEYNLTSM 593

Query: 896  CSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAEL--KGFEIKRRGELKLIKV 953
              IE+E    Y+  ++P  +      KKRYA    +G    +  KG E  R     L + 
Sbjct: 594  LEIEYETH--YRKFLMPTIRGAETGSKKRYAGLIGEGEQERIVFKGLESARTDWTPLAQK 651

Query: 954  FQAELFDKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLA 1013
            FQ  L+    HG    +    V    N              + E  D +     + + L 
Sbjct: 652  FQNTLYRMVFHGEDPSDYVREVVEKTN--------------NGEFDDQLVYQKRLRRKLH 697

Query: 1014 DYGEQKSCAVTTARRLSDF---LGDTMVKDKGLRCQYIVAC 1051
            +Y +     V  AR   D    LG  +      R +Y++  
Sbjct: 698  EYQKNIPPQVRAARLADDINAKLGRPLQYQNRGRIEYLITL 738


>gi|436491|gb|AAA81882.1| DNA polymerase, partial [Pyrococcus sp. GI-J]
          Length = 96

 Score = 56.2 bits (134), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 34/76 (44%), Positives = 43/76 (56%), Gaps = 2/76 (2%)

Query: 772 DSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARL-LIEKIG-KPLEL 829
           D  Q A K + NS+YGY     ARWY  E A  VT  G + I+  R  L EK G K L +
Sbjct: 20  DYRQRAIKILANSYYGYYGSAKARWYCKECAESVTAWGREYIEFVRKELEEKFGFKVLYI 79

Query: 830 DTDGIWCVLPGSFPEN 845
           DTDG++  +PG+ PE 
Sbjct: 80  DTDGLYATIPGAKPEE 95


>gi|125977976|ref|XP_001353021.1| GA19253 [Drosophila pseudoobscura pseudoobscura]
 gi|54641772|gb|EAL30522.1| GA19253 [Drosophila pseudoobscura pseudoobscura]
          Length = 1092

 Score = 56.2 bits (134), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 56/210 (26%), Positives = 82/210 (39%), Gaps = 56/210 (26%)

Query: 185 DFLDCIVDLREYDVPYHIRFAIDNDVRCGQWYDVS-------ISSTGPLLEKR----VDL 233
           DF DC     E ++ + IRF +D  V    W ++          ++ PL E R    VD+
Sbjct: 217 DFQDCRA--FENNIDFDIRFMVDTGVVGCNWIELPQGHWRLRSGNSKPLPESRCQIEVDV 274

Query: 234 L--------------QRAEVHVCAFDIETTKLPLKFPDADYDIIMMISYMLDGQGYLIIN 279
                          + A   + +FDIE       FP+A  D ++ I+ M+  QG     
Sbjct: 275 AFDRFISHEPEGEWSKVAPFRILSFDIECAGRKGIFPEAKMDPVIQIANMVIRQG----- 329

Query: 280 RECVGEDIEDLEYTPKPEFEGYF-----------KVTNVNNEIELLRLWFAHMQEVKPGI 328
                         P+P     F           +V   + E ++L  W A ++EV P I
Sbjct: 330 -------------EPEPFIRNVFTLNVCAPIIGSQVLCHDKETQMLDKWSAFVREVDPDI 376

Query: 329 YVTYNGDYFDWPFLETRAAHHGFKMSEELG 358
              YN + FD P+L  RAAH   K  E LG
Sbjct: 377 LTGYNINNFDIPYLINRAAHLKVKNFEYLG 406


>gi|320156832|ref|YP_004189211.1| DNA polymerase II [Vibrio vulnificus MO6-24/O]
 gi|319932144|gb|ADV87008.1| DNA polymerase II [Vibrio vulnificus MO6-24/O]
          Length = 789

 Score = 56.2 bits (134), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 51/191 (26%), Positives = 82/191 (42%), Gaps = 25/191 (13%)

Query: 777 AHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIG-KPLELDTDGIW 835
           A K I+NSFYG +   G R++   +A  +T  G +I++  +LLIE+ G + +  DTD  +
Sbjct: 496 AIKIIMNSFYGVLGSSGCRFFDTRLASSITMRGHEIMKQTKLLIEQQGYQVIYGDTDSTF 555

Query: 836 CVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSE 895
             L G F +          +  TI    V L     +++   ++  L   +   YETH  
Sbjct: 556 VSLNGRFEQ---------PEADTIGRQLVSLINQWWKHHLEQEF-NLNSILELEYETH-- 603

Query: 896 CSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAEL--KGFEIKRRGELKLIKV 953
                     Y+  ++P  +      KKRYA     G+   +  KG E  R     L + 
Sbjct: 604 ----------YRKFLMPTIRGAETGSKKRYAGLIQQGSEERIVFKGLESARTDWTPLAQR 653

Query: 954 FQAELFDKFLH 964
           FQ +L+    H
Sbjct: 654 FQHQLYMMIFH 664


>gi|423686401|ref|ZP_17661209.1| DNA polymerase II [Vibrio fischeri SR5]
 gi|371494469|gb|EHN70067.1| DNA polymerase II [Vibrio fischeri SR5]
          Length = 789

 Score = 56.2 bits (134), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 64/257 (24%), Positives = 104/257 (40%), Gaps = 43/257 (16%)

Query: 720 ENSFYVDTVRSFRDRRYEY---KGLNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQL 776
           E++  +D  R  R  RY++   K +  +W  +  EAK +                 +   
Sbjct: 451 EDNQAIDGFRGGRFHRYKHFLPKLIENLWSAR-DEAKRNNEK--------------AFSQ 495

Query: 777 AHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIG-KPLELDTDGIW 835
           A K I+NSFYG +   G R++   +A  +T  G +I++  R LIE+ G + +  DTD  +
Sbjct: 496 AIKIIMNSFYGVLGSSGCRFFDHRLASSITMRGHEIMKMTRELIEEEGYEVIYGDTDSTF 555

Query: 836 CVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSE 895
             L  S           L K+       ++  ++          Q  +  +S+ Y   S 
Sbjct: 556 VTLGQSM----------LSKEADAIGSSLVEKIN----------QWWISHLSEKYAIDSA 595

Query: 896 CSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAEL--KGFEIKRRGELKLIKV 953
             IE+E    Y+  ++P  +      KKRYA         E+  KG E  R     L + 
Sbjct: 596 LEIEYETH--YRTFLMPTIRGSETGSKKRYAGLVKKEGKEEIVFKGLETVRTDWTPLSQE 653

Query: 954 FQAELFDKFLHGSTIEE 970
           FQ  LF K  H   ++E
Sbjct: 654 FQKTLFHKVFHQQDVKE 670


>gi|392533889|ref|ZP_10281026.1| DNA polymerase II [Pseudoalteromonas arctica A 37-1-2]
          Length = 780

 Score = 56.2 bits (134), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 52/195 (26%), Positives = 82/195 (42%), Gaps = 23/195 (11%)

Query: 774 LQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDG 833
           L  A K I+NS YG +  KG R+Y   ++  +T  G +I+   +  IE++G         
Sbjct: 488 LSQAIKIIMNSLYGVLGSKGCRFYDPRLSSSITLRGHEIMLQTKKWIEELG--------- 538

Query: 834 IWCVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETH 893
            + V+ G     F     DL         C  + V +A+  T D     ++ + +T+   
Sbjct: 539 -YSVIYGDTDSTFIKLDDDLTHD-----ECNEIGVFLAKKITTDW----INEIKQTHNLT 588

Query: 894 SECSIEFEVDGPYKAMILPASKEEGILIKKRYA--VFNDDGTLAELKGFEIKRRGELKLI 951
           S   IEFE    Y    LP  + + +  KKRY   +   + +    KG E  R    KL 
Sbjct: 589 SHLEIEFE--SLYSPFFLPTIRGKLVGSKKRYVGKLIKPNESKLVFKGLETVRSDWTKLA 646

Query: 952 KVFQAELFDKFLHGS 966
           + FQ +LF     G+
Sbjct: 647 QQFQFDLFTSLFDGN 661


>gi|156975023|ref|YP_001445930.1| DNA polymerase II [Vibrio harveyi ATCC BAA-1116]
 gi|156526617|gb|ABU71703.1| hypothetical protein VIBHAR_02749 [Vibrio harveyi ATCC BAA-1116]
          Length = 816

 Score = 56.2 bits (134), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 50/192 (26%), Positives = 82/192 (42%), Gaps = 25/192 (13%)

Query: 777 AHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIG-KPLELDTDGIW 835
           A K I+NSFYG +   G R++   +A  +T  G +I++  ++LIE  G + +  DTD  +
Sbjct: 523 AIKIIMNSFYGVLGSSGCRFFDTRLASSITMRGHEIMKQTKVLIEDKGYQVIYGDTDSTF 582

Query: 836 CVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSE 895
             L G++ +        +  +L          VD      ND  ++        Y  +S 
Sbjct: 583 VSLNGAYSQA---DADKIGNEL----------VDYINQWWNDHLRS-------EYNLNSI 622

Query: 896 CSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAEL--KGFEIKRRGELKLIKV 953
             +E+E    Y+  ++P  +      KKRYA    +G    +  KG E  R     L + 
Sbjct: 623 LELEYETH--YRKFLMPTIRGAETGSKKRYAGLIGEGEQERIIFKGLESARTDWTPLAQR 680

Query: 954 FQAELFDKFLHG 965
           FQ  L+    HG
Sbjct: 681 FQNTLYQMIFHG 692


>gi|330504752|ref|YP_004381621.1| DNA polymerase II [Pseudomonas mendocina NK-01]
 gi|328919038|gb|AEB59869.1| DNA polymerase II [Pseudomonas mendocina NK-01]
          Length = 788

 Score = 56.2 bits (134), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 70/256 (27%), Positives = 105/256 (41%), Gaps = 51/256 (19%)

Query: 727 TVRSFRDRRYEYKG------LNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHKC 780
           +V  FR  R+          + +VW+G+   AK  GN+              +L  A K 
Sbjct: 453 SVEGFRGARFSRTRHCLPAIVERVWQGR-EAAKREGNA--------------ALSQALKI 497

Query: 781 ILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLEL-DTDGIWCVLP 839
           I+N+FYG +   G R++   +A  +T  G +I++  R LIE  G  +   DTD  +  L 
Sbjct: 498 IMNAFYGVLGSSGCRFFDPRLASSITLRGHQIMKRTRELIEAEGHAVIYGDTDSTFVWLG 557

Query: 840 GSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIE 899
            +  E    +   + + L            VAR NT        + + K Y   S   ++
Sbjct: 558 RAHDEE---EATRIGRAL------------VARVNT-----WWREHLQKEYGLTSALELQ 597

Query: 900 FEVDGPYKAMILPA--SKEEGILIKKRYA--VFNDDGT-LAELKGFEIKRRGELKLIKVF 954
           FE    Y+  ++P     EEG   KKRYA  V   DG+     KG E  R     L + F
Sbjct: 598 FETH--YRRFLMPTIRGTEEG--SKKRYAGLVLAADGSERIVFKGLETVRTDWSPLAQRF 653

Query: 955 QAELFDKFLHGSTIEE 970
           Q EL+     G   E+
Sbjct: 654 QQELYRLVFAGQPYED 669


>gi|269959628|ref|ZP_06174008.1| DNA polymerase elongation subunit [Vibrio harveyi 1DA3]
 gi|269835551|gb|EEZ89630.1| DNA polymerase elongation subunit [Vibrio harveyi 1DA3]
          Length = 787

 Score = 56.2 bits (134), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 51/198 (25%), Positives = 84/198 (42%), Gaps = 37/198 (18%)

Query: 777 AHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIG-KPLELDTDGIW 835
           A K I+NSFYG +   G R++   +A  +T  G +I++  ++LIE  G + +  DTD  +
Sbjct: 494 AIKIIMNSFYGVLGSSGCRFFDTRLASSITMRGHEIMKQTKVLIEDKGYQVIYGDTDSTF 553

Query: 836 CVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETH-- 893
             L G++ +                      + D   N        LVD +++ +  H  
Sbjct: 554 VSLNGAYSQ---------------------ADADKIGNE-------LVDYINQWWNNHLR 585

Query: 894 SECS----IEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAEL--KGFEIKRRGE 947
           SE +    +E E +  Y+  ++P  +      KKRYA    +G    +  KG E  R   
Sbjct: 586 SEYNLNSILELEYETHYRKFLMPTIRGAETGSKKRYAGLIGEGEQERIIFKGLESARTDW 645

Query: 948 LKLIKVFQAELFDKFLHG 965
             L + FQ  L+    HG
Sbjct: 646 TPLAQRFQNTLYQMIFHG 663


>gi|443690888|gb|ELT92898.1| hypothetical protein CAPTEDRAFT_165849 [Capitella teleta]
          Length = 1052

 Score = 56.2 bits (134), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 54/190 (28%), Positives = 80/190 (42%), Gaps = 37/190 (19%)

Query: 195 EYDVPYHIRFAIDNDV-----------------------RCGQWYDVS---ISSTGPLLE 228
           E ++ + IRF +D DV                       RC    DV+     S GP   
Sbjct: 191 ESNIDFEIRFMVDTDVVGCNWIVLPAGQYRVRPRNNMKTRCQIESDVAWDQFVSHGP--- 247

Query: 229 KRVDLLQRAEVHVCAFDIETTKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIE 288
              D L+ A +   +FDIE       FP+ D D ++ I+ M+  QG     +E    ++ 
Sbjct: 248 -EGDWLKLAPMLTLSFDIECAGRKGIFPEPDKDPVIQIANMVIRQG----EKEPFIRNVF 302

Query: 289 DLEYTPKPEFEGYFKVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAH 348
            L+    P      +V +  +E ELL+ W   ++EV P +   YN   FD P+L  RAAH
Sbjct: 303 TLKAC-APIVGA--QVLSFESEAELLKKWAEFIREVDPDVITGYNIQNFDLPYLLNRAAH 359

Query: 349 HGFKMSEELG 358
              K  + LG
Sbjct: 360 LKVKNFDYLG 369


>gi|392544408|ref|ZP_10291545.1| DNA polymerase II [Pseudoalteromonas piscicida JCM 20779]
          Length = 551

 Score = 56.2 bits (134), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 62/261 (23%), Positives = 108/261 (41%), Gaps = 40/261 (15%)

Query: 722 SFYVDTVRSFRDRRYEYKGLNKVWKGKLS--EAKASGNSIKIQEAQDMVVLYDSLQLAH- 778
           +F +D +      ++    ++   KGK S  E    G    +  A++   L   + L+  
Sbjct: 202 TFCIDPMGLIEGLQHPEHAIDGFNKGKFSRTEHHLPGLVAALSSAREQAKLDKDMMLSQA 261

Query: 779 -KCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIG-KPLELDTDGIWC 836
            K I+NS YG +  KG R+Y   +A  +T  G +I+Q  R  +E++G + +  DTD  + 
Sbjct: 262 IKIIMNSLYGVLGSKGCRFYDPRLASSITMRGHQIMQQTRTWVEQLGYEVIYGDTDSTFV 321

Query: 837 VLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSEC 896
            LP           + + K+L +                N++++ L   +  ++  HS  
Sbjct: 322 CLPEPLSSE---ACQTIGKQLMM--------------EINERWRAL---LMDSFGLHSHL 361

Query: 897 SIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAEL-------KGFEIKRRGELK 949
            IEFE    Y    +P  + + +  KKRY      G + EL       KG E  R    +
Sbjct: 362 EIEFETH--YSPFFMPTIRGQEVGSKKRYV-----GQITELGKQKLVFKGMETVRSDWTE 414

Query: 950 LIKVFQAELFDKFLHG-STIE 969
           + K +Q  +      G  T+E
Sbjct: 415 IAKEYQQAIIRALFDGLDTVE 435


>gi|320101467|ref|YP_004177059.1| replicative DNA polymerase I [Desulfurococcus mucosus DSM 2162]
 gi|319753819|gb|ADV65577.1| replicative DNA polymerase I [Desulfurococcus mucosus DSM 2162]
          Length = 799

 Score = 56.2 bits (134), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 80/372 (21%), Positives = 144/372 (38%), Gaps = 55/372 (14%)

Query: 187 LDCIVDLREYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLLEKRV--------------D 232
           L  + ++ E D+ + +R+A+DN +    W+   ++ T      RV              D
Sbjct: 109 LSEVAEVLEADIRFSMRYALDNGLEPCGWHVAEVAETPVPSRYRVARAFDVTGFIKPTGD 168

Query: 233 LLQRAEVHVCAFDIET-TKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLE 291
               +++ V AFDIE  T+     P+ D  II+ +     G+      R+   ED++D  
Sbjct: 169 TRPPSDLRVLAFDIEVLTESGSPHPERDPVIIIGVK-TSSGE-----TRQFTAEDLDD-- 220

Query: 292 YTPKPEFEGYFKVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGF 351
              K    G+ +                 + +  P I V YN ++FDWP+L  R+   G 
Sbjct: 221 ---KKVIAGFTE----------------FILDYDPDIVVGYNSNHFDWPYLLERSKILGL 261

Query: 352 KMS---EELGFQCDKNQGECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLG-YDP 407
           K+       G       G        ++D   + +    +P+       V    LG    
Sbjct: 262 KLDVGRRSGGEPSTSTYGHVSIPGRLNVDLLNYAEE---IPEVKLKSLDVVADYLGVMKR 318

Query: 408 LEVNPEDMVRFAK-----EKPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDE 462
            E    D V F K     EK +++  Y++ D  +T  L   ++ PF   LA I  +  D+
Sbjct: 319 SERVLVDYVDFPKYWRDPEKRRVLLRYNLDDVESTMGLAGKFL-PFAMQLANITGLPLDQ 377

Query: 463 VLRKGSGTLCEMLLMVQAYKANVICPNKHQSDPEKFYRNHLLESETYIGGHVECLESGVF 522
           V     G   E  LM +A +   + PN+ + + E +    +L+    I  ++  L+    
Sbjct: 378 VGAASVGHRLEWFLMKEATRRGELIPNRVEKEAEPYKGAVVLQPLPGIHENIAVLDFTSM 437

Query: 523 RSDLPTSFKLDP 534
             ++   + + P
Sbjct: 438 YPNIMIKYNIGP 449



 Score = 52.8 bits (125), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 89/354 (25%), Positives = 140/354 (39%), Gaps = 87/354 (24%)

Query: 770  LYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIG-KPLE 828
            L D  Q A K + N+ YGY+   GARWY  E A  VT  G + I       + +G K + 
Sbjct: 511  LLDERQRAVKILANAAYGYMGWVGARWYCRECAEAVTAWGRRTISTVIEHAKSMGLKVIY 570

Query: 829  LDTDGIWCVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSK 888
             DTD +       F EN   K K+                             L D V K
Sbjct: 571  GDTDSL-------FVENIPEKVKE-----------------------------LADFVEK 594

Query: 889  TYETHSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGEL 948
                  E   E +VD  Y+ +    +       KKRYA   +DG + ++ GFE  R    
Sbjct: 595  ------EMGFEIKVDKVYRRVFFTEA-------KKRYAGLLEDGRV-DIVGFEAVRGDWA 640

Query: 949  KLIKVFQAELFDKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTM 1008
            ++ K  Q ++ +  L    IE+    V ++ +       NQG+ I   +L+ +     T+
Sbjct: 641  EIAKEVQEKVTEILLSEKNIEKAIDYVRSIVSEL-----NQGR-IPLEKLVIW----KTL 690

Query: 1009 SKSLADYGEQKSCAVTTARRLSDFLGDTMVKDKGLRCQYIVACEPQGTPVSERAVPV--- 1065
            +K + +Y E ++  V  A++L       ++ + G +  YIV   P    +SERA P    
Sbjct: 691  TKQVDEY-EAEAPHVNAAKKLRRM---GIMVEVGDKVGYIVVKGP--GKISERAEPYMFV 744

Query: 1066 -------AIFETDAEIMKFYLR----------KWCKTSSDVGIRSIVDWSYYKQ 1102
                   A +  D +I+   LR          +  K +   G RS+ D++   Q
Sbjct: 745  KDPRLVDASYYIDHQIIPAALRILGYFGVTDTQLKKAAGSAGRRSLFDYTRKTQ 798


>gi|258626429|ref|ZP_05721276.1| DNA polymerase elongation subunit [Vibrio mimicus VM603]
 gi|258581481|gb|EEW06383.1| DNA polymerase elongation subunit [Vibrio mimicus VM603]
          Length = 787

 Score = 55.8 bits (133), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 52/192 (27%), Positives = 82/192 (42%), Gaps = 25/192 (13%)

Query: 777 AHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIG-KPLELDTDGIW 835
           A K I+NSFYG +   G R++   +A  +T  G +I+   + LIE  G + +  DTD  +
Sbjct: 494 AIKIIMNSFYGVLGSSGCRFFDTRLASSITMRGHEIMIQTKQLIEARGYQVIYGDTDSTF 553

Query: 836 CVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSE 895
             L G     +T +  D            + N  V+  N     Q   + + + Y   S 
Sbjct: 554 VALGGL----YTQQEAD-----------AIGNALVSEIN-----QWWTEHLKQEYALTSI 593

Query: 896 CSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAEL--KGFEIKRRGELKLIKV 953
             +E+E    Y+  ++P  +      KKRYA    DG   ++  KG E  R     L + 
Sbjct: 594 LELEYETH--YRRFLMPTIRGAETGSKKRYAGLKGDGDKEQIIFKGLESARTDWTPLAQR 651

Query: 954 FQAELFDKFLHG 965
           FQ +L+    HG
Sbjct: 652 FQNQLYQLIFHG 663


>gi|197286173|ref|YP_002152045.1| DNA polymerase II [Proteus mirabilis HI4320]
 gi|194683660|emb|CAR44603.1| DNA polymerase II [Proteus mirabilis HI4320]
          Length = 784

 Score = 55.8 bits (133), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 48/192 (25%), Positives = 82/192 (42%), Gaps = 25/192 (13%)

Query: 774 LQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIG-KPLELDTD 832
           L  A K I+N+FYG +   G R++   +A  +T  G +I++  R LIE  G + +  DTD
Sbjct: 491 LSQALKIIMNAFYGVLGSVGCRFFDPRLASSITLRGHEIMKKTRELIESKGYQVIYGDTD 550

Query: 833 GIWCVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYET 892
             +  L  +  E                    +    + R    D  Q     +++TY+ 
Sbjct: 551 STFVWLKAAHNE--------------------VQAEQIGRQLAQDVNQWWKSYLTETYQL 590

Query: 893 HSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIK 952
            S+  +E+E    Y+  ++P  +      KKRYA  + +  +   KG E  R     L +
Sbjct: 591 DSQLELEYETH--YRRFLMPTIRGMETGSKKRYAGLSHNKMV--FKGLETVRTDWTPLAQ 646

Query: 953 VFQAELFDKFLH 964
            FQ EL+ +  +
Sbjct: 647 AFQKELYTRIFN 658


>gi|407791966|ref|ZP_11139041.1| DNA polymerase II [Gallaecimonas xiamenensis 3-C-1]
 gi|407198442|gb|EKE68476.1| DNA polymerase II [Gallaecimonas xiamenensis 3-C-1]
          Length = 778

 Score = 55.8 bits (133), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 51/184 (27%), Positives = 78/184 (42%), Gaps = 24/184 (13%)

Query: 777 AHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKII-QNARLLIEKIGKPLELDTDGIW 835
           A K ++NSFYG +   G R+Y   +A  +T  G  I+ Q A+ + E   + +  DTD  +
Sbjct: 488 AIKILMNSFYGVLGSGGCRFYDPRLASSITLRGHAIMQQTAKWVAEAGHQVIYGDTDSTF 547

Query: 836 CVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSE 895
            +L     E  + +  D             +   +A +  +   Q L D      E   E
Sbjct: 548 VLL----AEALSHEQAD------------AIGQQLAADINHKWQQHLKD------EFDLE 585

Query: 896 CSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQ 955
           C +E E +  Y+  ++P  +      KKRYA    DG L   KG E  R     L K FQ
Sbjct: 586 CHLELEYETHYQRFLMPTIRGSEAGSKKRYAGMTADGELV-FKGLETVRTDWTPLAKQFQ 644

Query: 956 AELF 959
            +L+
Sbjct: 645 TQLY 648


>gi|422922467|ref|ZP_16955655.1| DNA polymerase II [Vibrio cholerae BJG-01]
 gi|341646210|gb|EGS70327.1| DNA polymerase II [Vibrio cholerae BJG-01]
          Length = 787

 Score = 55.8 bits (133), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 48/197 (24%), Positives = 80/197 (40%), Gaps = 37/197 (18%)

Query: 777 AHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIG-KPLELDTDGIW 835
           A K I+NSFYG +   G R++   +A  +T  G +I+   + LIE  G + +  DTD  +
Sbjct: 494 AIKIIMNSFYGVLGSSGCRFFDARLASSITMRGHEIMIQTKRLIEARGYQVIYGDTDSTF 553

Query: 836 CVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSE 895
             L G +                            ++   ++    LV  +++ + TH +
Sbjct: 554 VALGGQY----------------------------SQQEADNIGHALVREINQWWTTHLQ 585

Query: 896 ------CSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAEL--KGFEIKRRGE 947
                   +E E +  Y+  ++P  +      KKRYA    DG   +L  KG E  R   
Sbjct: 586 QEYALTSILELEYETHYRRFLMPTIRGSETGSKKRYAGLKGDGDNEQLIFKGLESARTDW 645

Query: 948 LKLIKVFQAELFDKFLH 964
             L + FQ +L+    H
Sbjct: 646 TPLAQRFQHQLYQLIFH 662


>gi|227357293|ref|ZP_03841650.1| DNA polymerase II [Proteus mirabilis ATCC 29906]
 gi|227162556|gb|EEI47545.1| DNA polymerase II [Proteus mirabilis ATCC 29906]
          Length = 784

 Score = 55.8 bits (133), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 48/192 (25%), Positives = 82/192 (42%), Gaps = 25/192 (13%)

Query: 774 LQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIG-KPLELDTD 832
           L  A K I+N+FYG +   G R++   +A  +T  G +I++  R LIE  G + +  DTD
Sbjct: 491 LSQALKIIMNAFYGVLGSVGCRFFDPRLASSITLRGHEIMKKTRELIESKGYQVIYGDTD 550

Query: 833 GIWCVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYET 892
             +  L  +  E                    +    + R    D  Q     +++TY+ 
Sbjct: 551 STFVWLKAAHNE--------------------VQAEQIGRQLAQDVNQWWKSYLTETYQL 590

Query: 893 HSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIK 952
            S+  +E+E    Y+  ++P  +      KKRYA  + +  +   KG E  R     L +
Sbjct: 591 DSQLELEYETH--YRRFLMPTIRGMETGSKKRYAGLSHNKMV--FKGLETVRTDWTPLAQ 646

Query: 953 VFQAELFDKFLH 964
            FQ EL+ +  +
Sbjct: 647 AFQKELYTRIFN 658


>gi|59712235|ref|YP_205011.1| DNA polymerase II [Vibrio fischeri ES114]
 gi|59480336|gb|AAW86123.1| DNA polymerase II [Vibrio fischeri ES114]
          Length = 781

 Score = 55.8 bits (133), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 56/197 (28%), Positives = 81/197 (41%), Gaps = 25/197 (12%)

Query: 777 AHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIG-KPLELDTDGIW 835
           A K I+NSFYG +   G R++   +A  +T  G +I++  R LIE  G + +  DTD  +
Sbjct: 488 AIKIIMNSFYGVLGSSGCRFFDHRLASSITMRGHEIMKMTRELIEAEGYEVIYGDTDSTF 547

Query: 836 CVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSE 895
             L  S            K+  TI    V           N   Q  +  +S+ Y   S 
Sbjct: 548 VTLGQSMSS---------KEADTIGSSLV--------EKIN---QWWISHLSEKYAIDSA 587

Query: 896 CSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAEL--KGFEIKRRGELKLIKV 953
             IE+E    Y+  ++P  +      KKRYA         E+  KG E  R     L + 
Sbjct: 588 LEIEYETH--YRTFLMPTIRGSETGSKKRYAGLVKKEGKEEIVFKGLETVRTDWTPLSQE 645

Query: 954 FQAELFDKFLHGSTIEE 970
           FQ  LF K  H   ++E
Sbjct: 646 FQKTLFHKVFHQQDVKE 662


>gi|397698019|ref|YP_006535902.1| DNA polymerase II [Pseudomonas putida DOT-T1E]
 gi|397334749|gb|AFO51108.1| DNA polymerase II [Pseudomonas putida DOT-T1E]
          Length = 786

 Score = 55.8 bits (133), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 65/253 (25%), Positives = 99/253 (39%), Gaps = 63/253 (24%)

Query: 727 TVRSFRDRRYEYKG------LNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHKC 780
           +V  FR  R+          + +VW+G+   AK  GN+               L  A K 
Sbjct: 451 SVEGFRGGRFSRTQHCLPAIVERVWQGR-EAAKREGNA--------------PLSQALKI 495

Query: 781 ILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIG-KPLELDTDGIWCVLP 839
           I+N+FYG +   G R++   +A  +T  G +I++  R LIE  G   +  DTD  +  L 
Sbjct: 496 IMNAFYGVLGSSGCRFFDPRLASSITMRGHQIMRQTRSLIEACGYDVIYGDTDSTFVWLK 555

Query: 840 GSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETH------ 893
           G+  E                        D AR       + LV  V++ ++ H      
Sbjct: 556 GAHAE-----------------------ADAARIG-----RELVAKVNQWWQAHLHETMN 587

Query: 894 --SECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAE---LKGFEIKRRGEL 948
             S   ++FEV   Y+  ++P  +      KKRYA        AE    KG E  R    
Sbjct: 588 LQSALELQFEVH--YRRFLMPTIRGTDEGSKKRYAGLVQRADGAEEMVYKGLESVRTDWS 645

Query: 949 KLIKVFQAELFDK 961
            L + FQ EL+ +
Sbjct: 646 PLARQFQQELYGR 658


>gi|238764658|ref|ZP_04625603.1| DNA damage-inducible DNA polymerase II [Yersinia kristensenii ATCC
           33638]
 gi|238697150|gb|EEP89922.1| DNA damage-inducible DNA polymerase II [Yersinia kristensenii ATCC
           33638]
          Length = 790

 Score = 55.8 bits (133), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 58/222 (26%), Positives = 95/222 (42%), Gaps = 40/222 (18%)

Query: 741 LNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHKCILNSFYGYVMRKGARWYSME 800
           +N++W+G+   AK   N                L  A K I+N+FYG +   G R++   
Sbjct: 476 VNQIWQGR-EAAKRQQNK--------------PLSQALKIIMNAFYGVLGSSGCRFFDPR 520

Query: 801 MAGVVTYTGAKIIQNARLLIEKIG-KPLELDTDGIWCVLPGSFPENFTFKTKDLKKKLTI 859
           +A  +T  G +I++  R LIE  G + +  DTD  +  L  +  E    +   + K+L +
Sbjct: 521 LASSITLRGHEIMRQTRELIEARGYQVIYGDTDSTFVWLKNAHSEE---QASRIGKEL-V 576

Query: 860 SYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEFEVDGPYKAMILPASKEEGI 919
            Y              N  +QT    + +TY+    C++E E +  Y+  ++P  +    
Sbjct: 577 QY-------------VNQWWQTH---IRETYDL--PCALELEFETHYRRFLMPTIRGAEQ 618

Query: 920 LIKKRYA--VFNDDGTLAELKGFEIKRRGELKLIKVFQAELF 959
             KKRYA  +    G     KG E  R     L + FQ EL+
Sbjct: 619 GSKKRYAGLISTPAGDQMIYKGLETVRTDWTPLAQQFQRELY 660


>gi|424042055|ref|ZP_17779860.1| DNA polymerase B family protein [Vibrio cholerae HENC-02]
 gi|408890029|gb|EKM28269.1| DNA polymerase B family protein [Vibrio cholerae HENC-02]
          Length = 787

 Score = 55.8 bits (133), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 51/193 (26%), Positives = 78/193 (40%), Gaps = 27/193 (13%)

Query: 777 AHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIG-KPLELDTDGIW 835
           A K I+NSFYG +   G R++   +A  +T  G +I++  ++LIE  G + +  DTD  +
Sbjct: 494 AIKIIMNSFYGVLGSSGCRFFDTRLASSITMRGHEIMKQTKVLIEAKGYQVIYGDTDSTF 553

Query: 836 CVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQY-QTLVDPVSKTYETHS 894
             L G                     P    + D   N   D   Q   D +   Y  +S
Sbjct: 554 VSLNG---------------------PYSQADADKIGNELVDYINQWWGDHLRDEYNLNS 592

Query: 895 ECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAEL--KGFEIKRRGELKLIK 952
              +E+E    Y+  ++P  +      KKRYA    +G    +  KG E  R     L +
Sbjct: 593 ILELEYETH--YRKFLMPTIRGAETGSKKRYAGLIGEGEKERIIFKGLESARTDWTPLAQ 650

Query: 953 VFQAELFDKFLHG 965
            FQ  L+    HG
Sbjct: 651 RFQNTLYQMIFHG 663


>gi|153827533|ref|ZP_01980200.1| DNA polymerase II [Vibrio cholerae MZO-2]
 gi|149738538|gb|EDM52893.1| DNA polymerase II [Vibrio cholerae MZO-2]
          Length = 787

 Score = 55.8 bits (133), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 51/191 (26%), Positives = 82/191 (42%), Gaps = 25/191 (13%)

Query: 777 AHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIG-KPLELDTDGIW 835
           A K I+NSFYG +   G R++   +A  +T  G +I+   + LIE  G + +  DTD  +
Sbjct: 494 AIKIIMNSFYGVLGSSGCRFFDARLASSITMRGHEIMIQTKQLIEARGYQVIYGDTDSTF 553

Query: 836 CVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSE 895
             L G + +    +  D              N+  A     +Q+ T  + + + Y   S 
Sbjct: 554 VALGGQYSQ----QEAD--------------NIGHALVREINQWWT--EHLKQEYALSSI 593

Query: 896 CSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAEL--KGFEIKRRGELKLIKV 953
             +E+E    Y+  ++P  +      KKRYA    DG   +L  KG E  R     L + 
Sbjct: 594 LELEYETH--YRRFLMPTIRGSETGSKKRYAGLKGDGDNEQLIFKGLESARTDWTPLAQR 651

Query: 954 FQAELFDKFLH 964
           FQ +L+    H
Sbjct: 652 FQHQLYQLIFH 662


>gi|398836632|ref|ZP_10593964.1| DNA polymerase elongation subunit (family B) [Herbaspirillum sp.
           YR522]
 gi|398211113|gb|EJM97736.1| DNA polymerase elongation subunit (family B) [Herbaspirillum sp.
           YR522]
          Length = 812

 Score = 55.8 bits (133), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 68/275 (24%), Positives = 105/275 (38%), Gaps = 49/275 (17%)

Query: 725 VDTVRSFRDRRYEYKG------LNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAH 778
            DTV  F   R+  +       + ++W+G+  +AK  GN                L  A 
Sbjct: 475 ADTVPGFNQARFSRRSHSLPAIIAQIWQGR-DDAKRQGNQ--------------PLSQAL 519

Query: 779 KCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIG-KPLELDTDGIWCV 837
           K I+NSFYG +     R++   +A  +T  G +I+   R LIE  G + +  DTD  +  
Sbjct: 520 KIIMNSFYGVLGSTACRFFDSRLASSITRRGHEIMHRTRELIEAQGFEVIYGDTDSTFVW 579

Query: 838 LPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECS 897
           L                K+         + +++ R       Q L       Y   S   
Sbjct: 580 L----------------KRAHDDPSARAIGIELTRTINAWWRQHL----QVQYGLDSALE 619

Query: 898 IEFEVDGPYKAMILPASKEEGILIKKRYAVFNDD---GTLAELKGFEIKRRGELKLIKVF 954
           ++FEV   Y+  ++P+ +   I  KKRYA +  D   G     KG E  R     L + F
Sbjct: 620 LQFEVH--YQRFLMPSVRGAEIGSKKRYAGYVRDAQGGDRVTYKGLETVRTDWTPLAQQF 677

Query: 955 QAELFDKFLHGSTIEECYSAVAAVANRWLDLLDNQ 989
           Q  L+ +   G    +    V  VA+     LD Q
Sbjct: 678 QQALYLRIFRGEPYRDYI--VGYVADLLAGRLDEQ 710


>gi|195172253|ref|XP_002026913.1| GL12820 [Drosophila persimilis]
 gi|194112681|gb|EDW34724.1| GL12820 [Drosophila persimilis]
          Length = 595

 Score = 55.8 bits (133), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 56/210 (26%), Positives = 82/210 (39%), Gaps = 56/210 (26%)

Query: 185 DFLDCIVDLREYDVPYHIRFAIDNDVRCGQWYDVS-------ISSTGPLLEKR----VDL 233
           DF DC     E ++ + IRF +D  V    W ++          ++ PL E R    VD+
Sbjct: 217 DFQDC--RAFENNIDFDIRFMVDTGVVGCNWIELPQGHWRLRSGNSKPLPESRCQIEVDV 274

Query: 234 L--------------QRAEVHVCAFDIETTKLPLKFPDADYDIIMMISYMLDGQGYLIIN 279
                          + A   + +FDIE       FP+A  D ++ I+ M+  QG     
Sbjct: 275 AFDRFISHEPEGEWSKVAPFRILSFDIECAGRKGIFPEAKMDPVIQIANMVIRQG----- 329

Query: 280 RECVGEDIEDLEYTPKPEFEGYF-----------KVTNVNNEIELLRLWFAHMQEVKPGI 328
                         P+P     F           +V   + E ++L  W A ++EV P I
Sbjct: 330 -------------EPEPFIRNVFTLNVCAPIIGSQVLCHDKETQMLDKWSAFVREVDPDI 376

Query: 329 YVTYNGDYFDWPFLETRAAHHGFKMSEELG 358
              YN + FD P+L  RAAH   K  E LG
Sbjct: 377 LTGYNINNFDIPYLINRAAHLKVKNFEYLG 406


>gi|262402435|ref|ZP_06078996.1| DNA polymerase II [Vibrio sp. RC586]
 gi|262351217|gb|EEZ00350.1| DNA polymerase II [Vibrio sp. RC586]
          Length = 787

 Score = 55.8 bits (133), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 53/196 (27%), Positives = 82/196 (41%), Gaps = 25/196 (12%)

Query: 777 AHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIG-KPLELDTDGIW 835
           A K I+NSFYG +   G R++   +A  +T  G +I+   + LIE  G + +  DTD  +
Sbjct: 494 AIKIIMNSFYGVLGSSGCRFFDARLASSITMRGHEIMIQTKQLIEARGYQVIYGDTDSTF 553

Query: 836 CVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSE 895
             L G F +    +  D            + N  V+  N     Q   + + + Y   S 
Sbjct: 554 VALGGQFSQ----QEAD-----------AIGNALVSEIN-----QWWTEHLKQEYALTSI 593

Query: 896 CSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAEL--KGFEIKRRGELKLIKV 953
             +E+E    Y+  ++P  +      KKRYA    D    +L  KG E  R     L + 
Sbjct: 594 LELEYETH--YRRFLMPTIRGSETGSKKRYAGLKGDDGNEQLIFKGLESARTDWTPLAQR 651

Query: 954 FQAELFDKFLHGSTIE 969
           FQ +L+    HG   E
Sbjct: 652 FQHQLYQLIFHGQDPE 667


>gi|422306766|ref|ZP_16393938.1| DNA polymerase B family protein [Vibrio cholerae CP1035(8)]
 gi|408625536|gb|EKK98443.1| DNA polymerase B family protein [Vibrio cholerae CP1035(8)]
          Length = 787

 Score = 55.8 bits (133), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 51/191 (26%), Positives = 82/191 (42%), Gaps = 25/191 (13%)

Query: 777 AHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIG-KPLELDTDGIW 835
           A K I+NSFYG +   G R++   +A  +T  G +I+   + LIE  G + +  DTD  +
Sbjct: 494 AIKIIMNSFYGVLGSSGCRFFDARLASSITMRGHEIMIQTKQLIEARGYQVIYGDTDSTF 553

Query: 836 CVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSE 895
             L G + +    +  D              N+  A     +Q+ T  + + + Y   S 
Sbjct: 554 VALGGQYSQ----QEAD--------------NIGHALVREINQWWT--EHLKQEYALTSI 593

Query: 896 CSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAEL--KGFEIKRRGELKLIKV 953
             +E+E    Y+  ++P  +      KKRYA    DG   +L  KG E  R     L + 
Sbjct: 594 LELEYETH--YRRFLMPTIRGSETGSKKRYAGLKGDGDNEQLIFKGLESARTDWTPLAQR 651

Query: 954 FQAELFDKFLH 964
           FQ +L+    H
Sbjct: 652 FQHQLYQLIFH 662


>gi|395444208|ref|YP_006384461.1| DNA polymerase II [Pseudomonas putida ND6]
 gi|388558205|gb|AFK67346.1| DNA polymerase II [Pseudomonas putida ND6]
          Length = 786

 Score = 55.5 bits (132), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 66/253 (26%), Positives = 102/253 (40%), Gaps = 63/253 (24%)

Query: 727 TVRSFRDRRYEYKG------LNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHKC 780
           +V  FR  R+          + +VW+G+   AK  GN+               L  A K 
Sbjct: 451 SVEGFRGGRFSRTQHCLPAIVERVWQGR-EAAKREGNA--------------PLSQALKI 495

Query: 781 ILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIG-KPLELDTDGIWCVLP 839
           I+N+FYG +   G R++   +A  +T  G +I++  R LIE  G   +  DTD  +  L 
Sbjct: 496 IMNAFYGVLGSSGCRFFDPRLASSITMRGHQIMRQTRSLIEACGYDVIYGDTDSTFVWLK 555

Query: 840 GSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETH------ 893
           G+  E                        D AR       + LV  V++ ++ H      
Sbjct: 556 GAHAE-----------------------ADAARIG-----RELVAKVNQWWQAHLHETMN 587

Query: 894 --SECSIEFEVDGPYKAMILPASKEEGILIKKRYA--VFNDDGTLAEL-KGFEIKRRGEL 948
             S   ++FEV   Y+  ++P  +      KKRYA  V   DG+   + KG E  R    
Sbjct: 588 LQSALELQFEVH--YRRFLMPTIRGTDEGSKKRYAGLVQRADGSQEMVYKGLESVRTDWS 645

Query: 949 KLIKVFQAELFDK 961
            L + FQ EL+ +
Sbjct: 646 PLARQFQQELYGR 658


>gi|419829787|ref|ZP_14353273.1| DNA polymerase B family protein [Vibrio cholerae HC-1A2]
 gi|419832760|ref|ZP_14356222.1| DNA polymerase B family protein [Vibrio cholerae HC-61A2]
 gi|422910006|ref|ZP_16944648.1| DNA polymerase II [Vibrio cholerae HE-09]
 gi|422916974|ref|ZP_16951302.1| DNA polymerase II [Vibrio cholerae HC-02A1]
 gi|423819644|ref|ZP_17715902.1| DNA polymerase B family protein [Vibrio cholerae HC-55C2]
 gi|423852977|ref|ZP_17719695.1| DNA polymerase B family protein [Vibrio cholerae HC-59A1]
 gi|423880401|ref|ZP_17723297.1| DNA polymerase B family protein [Vibrio cholerae HC-60A1]
 gi|423997389|ref|ZP_17740648.1| DNA polymerase II [Vibrio cholerae HC-02C1]
 gi|424016098|ref|ZP_17755939.1| DNA polymerase II [Vibrio cholerae HC-55B2]
 gi|424019033|ref|ZP_17758829.1| DNA polymerase II [Vibrio cholerae HC-59B1]
 gi|424624579|ref|ZP_18063051.1| DNA polymerase II [Vibrio cholerae HC-50A1]
 gi|424629078|ref|ZP_18067375.1| DNA polymerase II [Vibrio cholerae HC-51A1]
 gi|424633110|ref|ZP_18071220.1| DNA polymerase II [Vibrio cholerae HC-52A1]
 gi|424636199|ref|ZP_18074214.1| DNA polymerase II [Vibrio cholerae HC-55A1]
 gi|424640138|ref|ZP_18078028.1| DNA polymerase II [Vibrio cholerae HC-56A1]
 gi|424648173|ref|ZP_18085843.1| DNA polymerase II [Vibrio cholerae HC-57A1]
 gi|443526995|ref|ZP_21093062.1| DNA polymerase II [Vibrio cholerae HC-78A1]
 gi|341634262|gb|EGS59029.1| DNA polymerase II [Vibrio cholerae HE-09]
 gi|341638572|gb|EGS63215.1| DNA polymerase II [Vibrio cholerae HC-02A1]
 gi|408014339|gb|EKG51989.1| DNA polymerase II [Vibrio cholerae HC-50A1]
 gi|408019970|gb|EKG57337.1| DNA polymerase II [Vibrio cholerae HC-52A1]
 gi|408025080|gb|EKG62147.1| DNA polymerase II [Vibrio cholerae HC-56A1]
 gi|408025739|gb|EKG62785.1| DNA polymerase II [Vibrio cholerae HC-55A1]
 gi|408034997|gb|EKG71479.1| DNA polymerase II [Vibrio cholerae HC-57A1]
 gi|408057559|gb|EKG92403.1| DNA polymerase II [Vibrio cholerae HC-51A1]
 gi|408621372|gb|EKK94375.1| DNA polymerase B family protein [Vibrio cholerae HC-1A2]
 gi|408635928|gb|EKL08104.1| DNA polymerase B family protein [Vibrio cholerae HC-55C2]
 gi|408642738|gb|EKL14482.1| DNA polymerase B family protein [Vibrio cholerae HC-60A1]
 gi|408643496|gb|EKL15220.1| DNA polymerase B family protein [Vibrio cholerae HC-59A1]
 gi|408651404|gb|EKL22660.1| DNA polymerase B family protein [Vibrio cholerae HC-61A2]
 gi|408853711|gb|EKL93495.1| DNA polymerase II [Vibrio cholerae HC-02C1]
 gi|408861239|gb|EKM00835.1| DNA polymerase II [Vibrio cholerae HC-55B2]
 gi|408869041|gb|EKM08348.1| DNA polymerase II [Vibrio cholerae HC-59B1]
 gi|443454865|gb|ELT18665.1| DNA polymerase II [Vibrio cholerae HC-78A1]
          Length = 787

 Score = 55.5 bits (132), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 51/191 (26%), Positives = 82/191 (42%), Gaps = 25/191 (13%)

Query: 777 AHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIG-KPLELDTDGIW 835
           A K I+NSFYG +   G R++   +A  +T  G +I+   + LIE  G + +  DTD  +
Sbjct: 494 AIKIIMNSFYGVLGSSGCRFFDARLASSITMRGHEIMIQTKQLIEARGYQVIYGDTDSTF 553

Query: 836 CVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSE 895
             L G + +    +  D              N+  A     +Q+ T  + + + Y   S 
Sbjct: 554 VALGGQYSQ----QEAD--------------NIGHALVREINQWWT--EHLKQEYALTSI 593

Query: 896 CSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAEL--KGFEIKRRGELKLIKV 953
             +E+E    Y+  ++P  +      KKRYA    DG   +L  KG E  R     L + 
Sbjct: 594 LELEYETH--YRRFLMPTIRGSETGSKKRYAGLKGDGDNEQLIFKGLESARTDWTPLAQR 651

Query: 954 FQAELFDKFLH 964
           FQ +L+    H
Sbjct: 652 FQHQLYQLIFH 662


>gi|229521332|ref|ZP_04410751.1| DNA polymerase II [Vibrio cholerae TM 11079-80]
 gi|229341430|gb|EEO06433.1| DNA polymerase II [Vibrio cholerae TM 11079-80]
          Length = 787

 Score = 55.5 bits (132), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 51/191 (26%), Positives = 82/191 (42%), Gaps = 25/191 (13%)

Query: 777 AHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIG-KPLELDTDGIW 835
           A K I+NSFYG +   G R++   +A  +T  G +I+   + LIE  G + +  DTD  +
Sbjct: 494 AIKIIMNSFYGVLGSSGCRFFDARLASSITMRGHEIMIQTKQLIEARGYQVIYGDTDSTF 553

Query: 836 CVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSE 895
             L G + +    +  D              N+  A     +Q+ T  + + + Y   S 
Sbjct: 554 VALGGQYSQ----QEAD--------------NIGHALVREINQWWT--EHLKQEYALTSI 593

Query: 896 CSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAEL--KGFEIKRRGELKLIKV 953
             +E+E    Y+  ++P  +      KKRYA    DG   +L  KG E  R     L + 
Sbjct: 594 LELEYETH--YRRFLMPTIRGSETGSKKRYAGLKGDGDNEQLIFKGLESARTDWTPLAQR 651

Query: 954 FQAELFDKFLH 964
           FQ +L+    H
Sbjct: 652 FQHQLYQLIFH 662


>gi|336311116|ref|ZP_08566083.1| DNA polymerase II [Shewanella sp. HN-41]
 gi|335865332|gb|EGM70358.1| DNA polymerase II [Shewanella sp. HN-41]
          Length = 804

 Score = 55.5 bits (132), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 67/282 (23%), Positives = 111/282 (39%), Gaps = 40/282 (14%)

Query: 774  LQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIG-KPLELDTD 832
            L  A K I+NS YG +  +G  ++  ++A  +T  G +I++  R  IE++G + +  DTD
Sbjct: 510  LSQAIKIIMNSLYGVLGSQGCVFHDAKLASSITMRGHQIMKQTRAWIEEMGYQVIYGDTD 569

Query: 833  GIWCVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYET 892
              +  L G+ PE        L K +                  N ++Q  +       E 
Sbjct: 570  STFVWL-GTDPE--LMDVAQLGKTMA--------------AQINAKWQIKIQQ-----EF 607

Query: 893  HSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVF---NDDGTLAELKGFEIKRRGELK 949
              E  +E + +  Y+   +P  +      KKRY        D      KG E  R     
Sbjct: 608  QVESFLELQFERHYEQFFMPTLRGSLEGSKKRYVGAWRNGQDELEITFKGMEQVRSDWSP 667

Query: 950  LIKVFQAELFDKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMS 1009
            L +  QAEL+D+  +   I    ++V          +D       D ELI     S  M 
Sbjct: 668  LARNVQAELYDRMFNQRDISGYLTSV----------IDELLAGRRDDELI----FSKRMR 713

Query: 1010 KSLADYGEQKSCAVTTARRLSDFLGDTMVKDKGLRCQYIVAC 1051
            ++L +Y  + S  V  A++L D  G      +G +  Y++  
Sbjct: 714  RNLEEYTAKASPHVKVAKQLCDLTGKVSFGKRGAQIDYVITV 755


>gi|282163973|ref|YP_003356358.1| family B DNA polymerase [Methanocella paludicola SANAE]
 gi|282156287|dbj|BAI61375.1| family B DNA polymerase [Methanocella paludicola SANAE]
          Length = 799

 Score = 55.5 bits (132), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 82/348 (23%), Positives = 134/348 (38%), Gaps = 72/348 (20%)

Query: 192 DLREYDVPYHIRFAIDNDV-------RCGQWYDVSISSTGPLLE--KRVDLLQRAEVHVC 242
           D+RE D+ + +R+ ID  +         G+   +  + +G L    K V       + + 
Sbjct: 111 DVREADILFGVRYIIDKRLIPMGGIEAEGEPVPIDYAGSGLLCRSPKAVAREDEPPLKIM 170

Query: 243 AFDIETTKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYF 302
           AFD E    P   PD   D I++IS   + +                         E   
Sbjct: 171 AFDCEMWN-PRGMPDPKKDPIVIISIKTNDE-------------------------EKVL 204

Query: 303 KVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMS-----EEL 357
             T+ +++  L++ +  ++++  P I V YN D FDWP++  RA  H  K+S        
Sbjct: 205 TATDESDK-SLIKEFIQYVKDYDPDIIVGYNQDGFDWPYISERAKKHKIKLSVCRDGTSP 263

Query: 358 GFQCDKNQGECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPED--M 415
            F     Q + +     ++D F   +RD        G+K  T   +  D L V  +D  +
Sbjct: 264 MFGRGGLQRKTKLIGRLNIDLFQVAQRD------VDGVKIKTLENVA-DFLGVMKKDERV 316

Query: 416 VRFA---------KEKPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRK 466
             FA         +EK   +  Y+  D  +TY L    + P  F  A ++    D V + 
Sbjct: 317 NLFAADIYQYWADEEKRGELIQYAKDDVSSTYGLSEELL-PLQFEFARMVHEPADNVSKM 375

Query: 467 GSGTLCEMLLMVQAYKANVICPNKHQSDPEKFYRNHLLESETYIGGHV 514
           G G   E  L   AY+   + P++              E ETY+GG V
Sbjct: 376 GRGRQVESYLAYIAYEYGELIPSRGG------------EVETYLGGFV 411


>gi|153216997|ref|ZP_01950761.1| DNA polymerase II [Vibrio cholerae 1587]
 gi|124113979|gb|EAY32799.1| DNA polymerase II [Vibrio cholerae 1587]
          Length = 787

 Score = 55.5 bits (132), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 51/191 (26%), Positives = 82/191 (42%), Gaps = 25/191 (13%)

Query: 777 AHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIG-KPLELDTDGIW 835
           A K I+NSFYG +   G R++   +A  +T  G +I+   + LIE  G + +  DTD  +
Sbjct: 494 AIKIIMNSFYGVLGSSGCRFFDARLASSITMRGHEIMIQTKRLIEARGYQVIYGDTDSTF 553

Query: 836 CVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSE 895
             L G + +    +  D              N+  A     +Q+ T  + + + Y   S 
Sbjct: 554 VALGGQYSQ----QEAD--------------NIGHALVREINQWWT--EHLKQEYALTSI 593

Query: 896 CSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAEL--KGFEIKRRGELKLIKV 953
             +E+E    Y+  ++P  +      KKRYA    DG   +L  KG E  R     L + 
Sbjct: 594 LELEYETH--YRRFLMPTIRGSETGSKKRYAGLKGDGDNEQLIFKGLESARTDWTPLAQR 651

Query: 954 FQAELFDKFLH 964
           FQ +L+    H
Sbjct: 652 FQHQLYQLIFH 662


>gi|229515594|ref|ZP_04405053.1| DNA polymerase II [Vibrio cholerae TMA 21]
 gi|229347363|gb|EEO12323.1| DNA polymerase II [Vibrio cholerae TMA 21]
          Length = 787

 Score = 55.5 bits (132), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 51/191 (26%), Positives = 82/191 (42%), Gaps = 25/191 (13%)

Query: 777 AHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIG-KPLELDTDGIW 835
           A K I+NSFYG +   G R++   +A  +T  G +I+   + LIE  G + +  DTD  +
Sbjct: 494 AIKIIMNSFYGVLGSSGCRFFDARLASSITMRGHEIMIQTKRLIEARGYQVIYGDTDSTF 553

Query: 836 CVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSE 895
             L G + +    +  D              N+  A     +Q+ T  + + + Y   S 
Sbjct: 554 VALGGQYSQ----QEAD--------------NIGHALVREINQWWT--EHLKQEYALTSI 593

Query: 896 CSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAEL--KGFEIKRRGELKLIKV 953
             +E+E    Y+  ++P  +      KKRYA    DG   +L  KG E  R     L + 
Sbjct: 594 LELEYETH--YRRFLMPTIRGSETGSKKRYAGLKGDGDNEQLIFKGLESARTDWTPLAQR 651

Query: 954 FQAELFDKFLH 964
           FQ +L+    H
Sbjct: 652 FQHQLYQLIFH 662


>gi|157374706|ref|YP_001473306.1| DNA polymerase II [Shewanella sediminis HAW-EB3]
 gi|157317080|gb|ABV36178.1| DNA polymerase B region [Shewanella sediminis HAW-EB3]
          Length = 793

 Score = 55.5 bits (132), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 66/287 (22%), Positives = 116/287 (40%), Gaps = 43/287 (14%)

Query: 774  LQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIG-KPLELDTD 832
            L  A K I+NS YG +  KG  ++   +A  +T  G +I++  R  IE++G + +  DTD
Sbjct: 499  LSQAIKIIMNSLYGVLGSKGCVFHDARLASSITLRGHEIMKQTRKWIEELGYQVIYGDTD 558

Query: 833  GIWCVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYET 892
              +  L G  P+       ++ K+L          VD+      ++ +          E 
Sbjct: 559  STFVWLGGKSPQT---GIGEIGKQL----------VDIVNRRWKEKLKN---------EM 596

Query: 893  HSECSIEFEVDGPYKAMILPASKEEGILIKKRY--AVFNDDGTLA-ELKGFEIKRRGELK 949
              +C +E E +  ++   +P  +      KKRY  A    DG L    KG E  R     
Sbjct: 597  KLDCYLELEFESHFEQFFMPTLRGSSEGSKKRYVGAYTKPDGELELVFKGMEQVRSDWSP 656

Query: 950  LIKVFQAELFDKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMS 1009
            L +  Q EL+ +          +S +  V+      L     D+   +L D +  +  + 
Sbjct: 657  LARRVQQELYFRL---------FSKLDVVS-----FLRGVIDDLKLGKLDDELIFTKRLR 702

Query: 1010 KSLADYGEQKSCAVTTARRLSDFLGDTMVKDKGLRCQYIV---ACEP 1053
            + + DY  + S  V  A+++     D     KG + +Y++     EP
Sbjct: 703  RDIKDYTAKSSPHVKAAQKMCQHTSDEQYSRKGTKVEYLITLNGAEP 749


>gi|148548510|ref|YP_001268612.1| DNA polymerase II [Pseudomonas putida F1]
 gi|148512568|gb|ABQ79428.1| DNA damage-inducible DNA polymerase II [Pseudomonas putida F1]
          Length = 786

 Score = 55.5 bits (132), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 64/245 (26%), Positives = 99/245 (40%), Gaps = 47/245 (19%)

Query: 727 TVRSFRDRRYEYKG------LNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHKC 780
           +V  FR  R+          + +VW+G+   AK  GN+               L  A K 
Sbjct: 451 SVEGFRGGRFSRTQHCLPAIVERVWQGR-EAAKREGNA--------------PLSQALKI 495

Query: 781 ILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIG-KPLELDTDGIWCVLP 839
           I+N+FYG +   G R++   +A  +T  G +I++  R LIE  G   +  DTD  +  L 
Sbjct: 496 IMNAFYGVLGSSGCRFFDPRLASSITMRGHQIMRQTRSLIEACGYDVIYGDTDSTFVWLK 555

Query: 840 GSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIE 899
           G+  E        + ++L            VA+ N   Q       + +T    S   ++
Sbjct: 556 GAHAEE---DAARIGREL------------VAKVNQWWQAH-----LHETMNLQSALELQ 595

Query: 900 FEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAE---LKGFEIKRRGELKLIKVFQA 956
           FEV   Y+  ++P  +      KKRYA        AE    KG E  R     L + FQ 
Sbjct: 596 FEVH--YRRFLMPTIRGTDEGSKKRYAGLVQRADGAEEMVYKGLESVRTDWSPLARQFQQ 653

Query: 957 ELFDK 961
           EL+ +
Sbjct: 654 ELYGR 658


>gi|326428620|gb|EGD74190.1| polymerase [Salpingoeca sp. ATCC 50818]
          Length = 1139

 Score = 55.5 bits (132), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 42/127 (33%), Positives = 56/127 (44%), Gaps = 13/127 (10%)

Query: 235 QRAEVHVCAFDIETTKLPLKFPDADYDIIMMISYMLDGQGY---LIINRECVGEDIEDLE 291
           Q A + + +FDIE       FP+ D D ++ I+ M+  +G     + N   +G       
Sbjct: 337 QIAPLRILSFDIECAGRKGVFPEPDKDPVIQIANMVQVEGESKPFVRNVFTLG------- 389

Query: 292 YTPKPEFEGYFKVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGF 351
            T  P      KV     EIELL  W A ++E  P I   YN   FD PFL  RA H G 
Sbjct: 390 -TCAPIVGS--KVIACKTEIELLESWSAFVRECDPDIVTGYNITNFDLPFLMNRAKHLGA 446

Query: 352 KMSEELG 358
           +    LG
Sbjct: 447 RKFPYLG 453


>gi|421350985|ref|ZP_15801350.1| DNA polymerase II [Vibrio cholerae HE-25]
 gi|395951430|gb|EJH62044.1| DNA polymerase II [Vibrio cholerae HE-25]
          Length = 787

 Score = 55.5 bits (132), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 51/191 (26%), Positives = 82/191 (42%), Gaps = 25/191 (13%)

Query: 777 AHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIG-KPLELDTDGIW 835
           A K I+NSFYG +   G R++   +A  +T  G +I+   + LIE  G + +  DTD  +
Sbjct: 494 AIKIIMNSFYGVLGSSGCRFFDARLASSITMRGHEIMIQTKQLIEARGYQVIYGDTDSTF 553

Query: 836 CVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSE 895
             L G + +    +  D              N+  A     +Q+ T  + + + Y   S 
Sbjct: 554 VALGGQYSQ----QEAD--------------NIGHALVREINQWWT--EHLKQEYALTSI 593

Query: 896 CSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAEL--KGFEIKRRGELKLIKV 953
             +E+E    Y+  ++P  +      KKRYA    DG   +L  KG E  R     L + 
Sbjct: 594 LELEYETH--YRRFLMPTIRGSETGSKKRYAGLKGDGDNEQLIFKGLESARTDWTPLAQR 651

Query: 954 FQAELFDKFLH 964
           FQ +L+    H
Sbjct: 652 FQHQLYQLIFH 662


>gi|123441000|ref|YP_001004989.1| DNA polymerase II [Yersinia enterocolitica subsp. enterocolitica
           8081]
 gi|122087961|emb|CAL10749.1| DNA polymerase II [Yersinia enterocolitica subsp. enterocolitica
           8081]
          Length = 790

 Score = 55.5 bits (132), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 58/233 (24%), Positives = 94/233 (40%), Gaps = 52/233 (22%)

Query: 741 LNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHKCILNSFYGYVMRKGARWYSME 800
           +N++W+G+   AK   N                L  A K I+N+FYG +   G R++   
Sbjct: 476 VNQIWQGR-EAAKRQQNK--------------PLSQALKIIMNAFYGVLGSSGCRFFDPR 520

Query: 801 MAGVVTYTGAKIIQNARLLIEKIG-KPLELDTDGIWCVLPGSFPENFTFKTKDLKKKLTI 859
           +A  +T  G +I++  R LIE  G + +  DTD  +  L  +  E         ++  +I
Sbjct: 521 LASSITMRGHEIMRKTRELIEARGYQVIYGDTDSTFVWLKNAHSE---------EQAASI 571

Query: 860 SYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSE------CSIEFEVDGPYKAMILPA 913
                               Q LV  V++ ++TH        C++E E +  Y+  ++P 
Sbjct: 572 G-------------------QELVQYVNQWWQTHIRETFDLPCALELEFETHYRRFLMPT 612

Query: 914 SKEEGILIKKRYA--VFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFLH 964
            +      KKRYA  +    G     KG E  R     L + FQ EL+ K   
Sbjct: 613 IRGAEQGSKKRYAGLISTPTGDQMIYKGLETVRTDWTPLAQQFQRELYLKIFQ 665


>gi|254292121|ref|ZP_04962894.1| DNA polymerase II [Vibrio cholerae AM-19226]
 gi|150421956|gb|EDN13930.1| DNA polymerase II [Vibrio cholerae AM-19226]
          Length = 787

 Score = 55.5 bits (132), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 51/191 (26%), Positives = 82/191 (42%), Gaps = 25/191 (13%)

Query: 777 AHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIG-KPLELDTDGIW 835
           A K I+NSFYG +   G R++   +A  +T  G +I+   + LIE  G + +  DTD  +
Sbjct: 494 AIKIIMNSFYGVLGSSGCRFFDARLASSITMRGHEIMIQTKQLIEARGYQVIYGDTDSTF 553

Query: 836 CVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSE 895
             L G + +    +  D              N+  A     +Q+ T  + + + Y   S 
Sbjct: 554 VALGGQYSQ----QEAD--------------NIGHALVREINQWWT--EHLKQEYALTSI 593

Query: 896 CSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAEL--KGFEIKRRGELKLIKV 953
             +E+E    Y+  ++P  +      KKRYA    DG   +L  KG E  R     L + 
Sbjct: 594 LELEYETH--YRRFLMPTIRGSETGSKKRYAGLKGDGDNEQLIFKGLESARTDWTPLAQR 651

Query: 954 FQAELFDKFLH 964
           FQ +L+    H
Sbjct: 652 FQHQLYQLIFH 662


>gi|229529700|ref|ZP_04419090.1| DNA polymerase II [Vibrio cholerae 12129(1)]
 gi|229333474|gb|EEN98960.1| DNA polymerase II [Vibrio cholerae 12129(1)]
          Length = 787

 Score = 55.5 bits (132), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 51/191 (26%), Positives = 82/191 (42%), Gaps = 25/191 (13%)

Query: 777 AHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIG-KPLELDTDGIW 835
           A K I+NSFYG +   G R++   +A  +T  G +I+   + LIE  G + +  DTD  +
Sbjct: 494 AIKIIMNSFYGVLGSSGCRFFDARLASSITMRGHEIMIQTKRLIEARGYQVIYGDTDSTF 553

Query: 836 CVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSE 895
             L G + +    +  D              N+  A     +Q+ T  + + + Y   S 
Sbjct: 554 VALGGQYSQ----QEAD--------------NIGHALVREINQWWT--EHLKQEYALTSI 593

Query: 896 CSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAEL--KGFEIKRRGELKLIKV 953
             +E+E    Y+  ++P  +      KKRYA    DG   +L  KG E  R     L + 
Sbjct: 594 LELEYETH--YRRFLMPTIRGSETGSKKRYAGLKGDGDNEQLIFKGLESARTDWTPLAQR 651

Query: 954 FQAELFDKFLH 964
           FQ +L+    H
Sbjct: 652 FQHQLYQLIFH 662


>gi|297578811|ref|ZP_06940739.1| DNA polymerase II [Vibrio cholerae RC385]
 gi|297536405|gb|EFH75238.1| DNA polymerase II [Vibrio cholerae RC385]
          Length = 787

 Score = 55.5 bits (132), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 51/191 (26%), Positives = 82/191 (42%), Gaps = 25/191 (13%)

Query: 777 AHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIG-KPLELDTDGIW 835
           A K I+NSFYG +   G R++   +A  +T  G +I+   + LIE  G + +  DTD  +
Sbjct: 494 AIKIIMNSFYGVLGSSGCRFFDARLASSITMRGHEIMIQTKRLIEARGYQVIYGDTDSTF 553

Query: 836 CVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSE 895
             L G + +    +  D              N+  A     +Q+ T  + + + Y   S 
Sbjct: 554 VALGGQYSQ----QEAD--------------NIGHALVREINQWWT--EHLKQEYALTSI 593

Query: 896 CSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAEL--KGFEIKRRGELKLIKV 953
             +E+E    Y+  ++P  +      KKRYA    DG   +L  KG E  R     L + 
Sbjct: 594 LELEYETH--YRRFLMPTIRGSETGSKKRYAGLKGDGDNEQLIFKGLESARTDWTPLAQR 651

Query: 954 FQAELFDKFLH 964
           FQ +L+    H
Sbjct: 652 FQHQLYQLIFH 662


>gi|386311311|ref|YP_006007367.1| DNA polymerase II [Yersinia enterocolitica subsp. palearctica Y11]
 gi|418240093|ref|ZP_12866636.1| DNA polymerase II [Yersinia enterocolitica subsp. palearctica
           PhRBD_Ye1]
 gi|433551417|ref|ZP_20507459.1| DNA polymerase II [Yersinia enterocolitica IP 10393]
 gi|318607164|emb|CBY28662.1| DNA polymerase II [Yersinia enterocolitica subsp. palearctica Y11]
 gi|351780596|gb|EHB22666.1| DNA polymerase II [Yersinia enterocolitica subsp. palearctica
           PhRBD_Ye1]
 gi|431787599|emb|CCO70499.1| DNA polymerase II [Yersinia enterocolitica IP 10393]
          Length = 790

 Score = 55.5 bits (132), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 58/227 (25%), Positives = 96/227 (42%), Gaps = 40/227 (17%)

Query: 741 LNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHKCILNSFYGYVMRKGARWYSME 800
           +N++W+G+   AK   N                L  A K I+N+FYG +   G R++   
Sbjct: 476 VNQIWQGR-EAAKRQQNK--------------PLSQALKIIMNAFYGVLGSSGCRFFDPR 520

Query: 801 MAGVVTYTGAKIIQNARLLIEKIG-KPLELDTDGIWCVLPGSFPENFTFKTKDLKKKLTI 859
           +A  +T  G +I++  R LIE  G + +  DTD  +  L  +  E    +   + K+L +
Sbjct: 521 LASSITMRGHEIMRKTRELIEARGYQVIYGDTDSTFVWLKNAHSEE---QASSIGKEL-V 576

Query: 860 SYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEFEVDGPYKAMILPASKEEGI 919
            Y              N  +QT    + +T++    C++E E +  Y+  ++P  +    
Sbjct: 577 QY-------------VNQWWQTH---IRETFDL--PCALELEFETHYRRFLMPTIRGAEQ 618

Query: 920 LIKKRYA--VFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFLH 964
             KKRYA  +    G     KG E  R     L + FQ EL+ K   
Sbjct: 619 GSKKRYAGLISTPAGDQMIYKGLETVRTDWTPLAQQFQRELYLKIFQ 665


>gi|262190261|ref|ZP_06048533.1| DNA polymerase II [Vibrio cholerae CT 5369-93]
 gi|262033856|gb|EEY52324.1| DNA polymerase II [Vibrio cholerae CT 5369-93]
          Length = 787

 Score = 55.5 bits (132), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 51/191 (26%), Positives = 82/191 (42%), Gaps = 25/191 (13%)

Query: 777 AHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIG-KPLELDTDGIW 835
           A K I+NSFYG +   G R++   +A  +T  G +I+   + LIE  G + +  DTD  +
Sbjct: 494 AIKIIMNSFYGVLGSSGCRFFDARLASSITMRGHEIMIQTKQLIEARGYQVIYGDTDSTF 553

Query: 836 CVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSE 895
             L G + +    +  D              N+  A     +Q+ T  + + + Y   S 
Sbjct: 554 VALGGQYSQ----QEAD--------------NIGHALVREINQWWT--EHLKQEYALTSI 593

Query: 896 CSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAEL--KGFEIKRRGELKLIKV 953
             +E+E    Y+  ++P  +      KKRYA    DG   +L  KG E  R     L + 
Sbjct: 594 LELEYETH--YRRFLMPTIRGSETGSKKRYAGLKGDGDNEQLIFKGLESARTDWTPLAQR 651

Query: 954 FQAELFDKFLH 964
           FQ +L+    H
Sbjct: 652 FQHQLYQLIFH 662


>gi|385785835|ref|YP_005816944.1| DNA polymerase II [Erwinia sp. Ejp617]
 gi|310765107|gb|ADP10057.1| DNA polymerase II [Erwinia sp. Ejp617]
          Length = 787

 Score = 55.5 bits (132), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 74/332 (22%), Positives = 124/332 (37%), Gaps = 60/332 (18%)

Query: 741  LNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHKCILNSFYGYVMRKGARWYSME 800
            ++ +W+G+   AK  GN                L  A K I+N+FYG +     R++   
Sbjct: 473  VSHIWQGR-EAAKKQGNK--------------PLSQALKIIMNAFYGVLGTSACRFFDPR 517

Query: 801  MAGVVTYTGAKIIQNARLLIEKIG-KPLELDTDGIWCVLPGSFPENFTFKTKDLKKKLTI 859
            +A  +T  G  I++  R LIE  G   +  DTD  +  L  +  E      + + ++L +
Sbjct: 518  LASSITLRGHDIMRQTRELIEAEGYDVIYGDTDSTFVWLKTAHDEA---AAEHIGQRLVM 574

Query: 860  SYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEFEVDGPYKAMILPASKEEGI 919
                            N  +Q  +       E   E ++E E +  +   ++P  +    
Sbjct: 575  --------------KVNQWWQQHLQS-----EYRLESALELEYETHFSRFLMPTIRGAEQ 615

Query: 920  LIKKRYA--VFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFLHGSTIEECYSAVAA 977
              KKRYA  +  D       KG E  R     L + FQ EL+ K   G   +        
Sbjct: 616  GSKKRYAGLIRRDGNQRMVFKGLETVRTDWTPLAQKFQQELYLKIFTGQPYQ-------- 667

Query: 978  VANRWLDLLDNQGKDIADSELIDYISESSTMSKSLADYGEQKSCAVTTAR---RLSDFLG 1034
                  D +    + + D EL + +     + + L DY       V  AR     +  LG
Sbjct: 668  ------DYIRETVRQLLDGELDEQLVYRKRLRRPLDDYQRNVPPHVRAARIADEQNHKLG 721

Query: 1035 DTMVKDKGLRCQYIVACE-PQGTPVSERAVPV 1065
              +   KG   +Y++A   P+  P+  R  P+
Sbjct: 722  RPLEYQKGGHIRYVIATSGPE--PLEARITPL 751


>gi|197335659|ref|YP_002156449.1| DNA polymerase II [Vibrio fischeri MJ11]
 gi|197317149|gb|ACH66596.1| DNA polymerase II [Vibrio fischeri MJ11]
          Length = 781

 Score = 55.5 bits (132), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 64/257 (24%), Positives = 103/257 (40%), Gaps = 43/257 (16%)

Query: 720 ENSFYVDTVRSFRDRRYEY---KGLNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQL 776
           E++  +D  R  R  RY++   K +  +W  +  EAK +                 +   
Sbjct: 443 EDNQAIDGFRGGRFHRYKHFLPKLIENLWSAR-DEAKRNNEK--------------AFSQ 487

Query: 777 AHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIG-KPLELDTDGIW 835
           A K I+NSFYG +   G R++   +A  +T  G +I++  R LIE  G + +  DTD  +
Sbjct: 488 AIKIIMNSFYGVLGSSGCRFFDHRLASSITMRGHEIMKMTRELIEAEGYEVIYGDTDSTF 547

Query: 836 CVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSE 895
             L  S           L K+       ++  ++          Q  +  +S+ Y   S 
Sbjct: 548 VTLGQSM----------LSKEADAIGSSLVEKIN----------QWWISHLSEKYAIDSA 587

Query: 896 CSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAEL--KGFEIKRRGELKLIKV 953
             IE+E    Y+  ++P  +      KKRYA         E+  KG E  R     L + 
Sbjct: 588 LEIEYETH--YRTFLMPTIRGSETGSKKRYAGLVKKEGKEEIVFKGLETVRTDWTPLSQE 645

Query: 954 FQAELFDKFLHGSTIEE 970
           FQ  LF K  H   ++E
Sbjct: 646 FQKTLFHKVFHQQDVKE 662


>gi|410493676|ref|YP_006908614.1| DNA polymerase [Epinotia aporema granulovirus]
 gi|354805110|gb|AER41532.1| DNA polymerase [Epinotia aporema granulovirus]
          Length = 1068

 Score = 55.5 bits (132), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 60/226 (26%), Positives = 101/226 (44%), Gaps = 29/226 (12%)

Query: 241 VCAFDIETTKLPLKFPDADYDIIMMISYMLDGQGYLI-----INRECVGEDIEDLEYTPK 295
           V ++D+ET    L F +A+ D I+ ISY+L  Q   I     IN       +E +E    
Sbjct: 228 VGSYDLETYTTGLTFSNAECDSIITISYVLRKQNNEIYRVCFINTNNKPFTLESVE--SM 285

Query: 296 PEFEGYFKVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSE 355
           PE +G   V   ++E  ++  +F  +    P   + YNGD FD PFL TR      K++ 
Sbjct: 286 PEVDGVVYVIPFDDEKTMIEAFFELVFRSNPDDILDYNGDKFDIPFLLTRMKL--LKINN 343

Query: 356 ELGFQCDKNQGE-----CRAKFA-----------CHLDCFAWVKRDSYLPQGSQGLKAVT 399
              ++ +  + E      R KF             HLD + ++  +S+     + L+  T
Sbjct: 344 RFIYRYNLPKSEMKSVHIRTKFGYGFNNHLMVYYNHLDVYQFI-NNSFDKNKIENLRLDT 402

Query: 400 KAK--LGYDPLEVNPEDMVRFAKE-KPQMMASYSVSDAVATYYLYM 442
            A   L    +E++ ++M+R   E K   +  Y+V D+V    +Y+
Sbjct: 403 TASFYLNVGKVELSVKEMMRLYNEGKFGKIVLYNVRDSVLPLEMYI 448


>gi|347522849|ref|YP_004780419.1| DNA polymerase Pol2 [Pyrolobus fumarii 1A]
 gi|343459731|gb|AEM38167.1| DNA polymerase Pol2 [Pyrolobus fumarii 1A]
          Length = 803

 Score = 55.5 bits (132), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 79/348 (22%), Positives = 145/348 (41%), Gaps = 64/348 (18%)

Query: 187 LDCIVDLREYDVPYHIRFAIDNDVRCGQWYDVSI------------------SSTGPLLE 228
           +D + D+ E D+ + +R+ ID+D+    WY V                    S   PL  
Sbjct: 110 VDGVEDVLEADIRFAMRYLIDHDLFPFTWYRVEAEPLENKMGFRVDKVYLVKSRPEPLYG 169

Query: 229 KRVDLLQRAEVHVCAFDIET-TKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDI 287
           + +   +  ++ + AFDIE  +K     P+ D  I++ +    DG   L I     G+D 
Sbjct: 170 EALAPTKLPDLRILAFDIEVYSKQGSPRPERDPVIVIAVK-TDDGDEVLFIAE---GKD- 224

Query: 288 EDLEYTPKPEFEGYFKVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAA 347
              +  P  EF  Y K  +                   P I V YN ++FDWP+L  RA 
Sbjct: 225 ---DRKPIREFVEYVKRYD-------------------PDIIVGYNNNHFDWPYLLRRAR 262

Query: 348 HHGFKM--SEELGFQCDKN-QGECRAKFACHLDCFAWVK-----RDSYLPQGSQGLKAVT 399
             G K+  +  +G +   +  G        ++D + + +     +   L + ++ L  + 
Sbjct: 263 ILGIKLDVTRRVGAEPTTSVHGHVSVPGRLNVDLYDYAEEMPEIKIKSLEEVAEYLGVMK 322

Query: 400 KAKLGYDPLEVNPEDMVRF---AKEKPQMMASYSVSDAVATYYLYMTYVHPFIFSLATII 456
           K+    + + +N  ++  +    K++P ++  Y+  D  ATY L    + PF   L+ + 
Sbjct: 323 KS----ERVIINWWEIPDYWDDPKKRP-LLLQYARDDVRATYGL-AEKILPFAIQLSYVT 376

Query: 457 PMSPDEVLRKGSGTLCEMLLMVQAYKANVICPNKHQSDPEKFYRNHLL 504
            +  D+V     G   E  L+  A+K   + PN+ +  PE+ YR  ++
Sbjct: 377 GLPLDQVGAMSVGFRLEWYLIRAAFKMKELVPNRVER-PEETYRGAIV 423



 Score = 50.4 bits (119), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 67/283 (23%), Positives = 110/283 (38%), Gaps = 71/283 (25%)

Query: 770  LYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIG-KPLE 828
            L D  Q A K + N+ YGY+   GARWY  E A  VT  G  +I+ A  +  K+G K + 
Sbjct: 517  LLDERQKALKVLANASYGYMGWSGARWYCRECAEAVTAWGRHLIRTAINIARKLGLKVIY 576

Query: 829  LDTDGIWCVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSK 888
             DTD ++           T+  + ++K + I                             
Sbjct: 577  GDTDSLFV----------TYDPEKVEKFIKI----------------------------- 597

Query: 889  TYETHSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGEL 948
                  E   E +++  YK +    +       KKRYA   +DG + ++ GFE  R    
Sbjct: 598  ---IEEELGFEIKLEKVYKRVFFTEA-------KKRYAGLLEDGRI-DIVGFEAVRGDWC 646

Query: 949  KLIKVFQAELFDKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSEL-IDYISESST 1007
            +L K  Q ++ +  L  S + +    V  +            K++ + ++ I+ +    T
Sbjct: 647  ELAKEVQTKVVEIVLKTSDVNKAVEYVRKIV-----------KELEEGKVPIEKLVIWKT 695

Query: 1008 MSKSLADYGEQKSCAVTTARRLS--------DFLGDTMVKDKG 1042
            +SK L +Y  +    V   R LS        D +G  +VK  G
Sbjct: 696  LSKRLEEYTTEAPHVVAAKRMLSAGYRVSPGDKIGYVIVKGGG 738


>gi|332160267|ref|YP_004296844.1| DNA polymerase II [Yersinia enterocolitica subsp. palearctica
           105.5R(r)]
 gi|325664497|gb|ADZ41141.1| DNA polymerase II [Yersinia enterocolitica subsp. palearctica
           105.5R(r)]
          Length = 790

 Score = 55.5 bits (132), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 58/227 (25%), Positives = 96/227 (42%), Gaps = 40/227 (17%)

Query: 741 LNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHKCILNSFYGYVMRKGARWYSME 800
           +N++W+G+   AK   N                L  A K I+N+FYG +   G R++   
Sbjct: 476 VNQIWQGR-EAAKRQQNK--------------PLSQALKIIMNAFYGVLGSSGCRFFDPR 520

Query: 801 MAGVVTYTGAKIIQNARLLIEKIG-KPLELDTDGIWCVLPGSFPENFTFKTKDLKKKLTI 859
           +A  +T  G +I++  R LIE  G + +  DTD  +  L  +  E    +   + K+L +
Sbjct: 521 LASSITMRGHEIMRKTRELIEARGYQVIYGDTDSTFVWLKNAHSEE---QASSIGKEL-V 576

Query: 860 SYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEFEVDGPYKAMILPASKEEGI 919
            Y              N  +QT    + +T++    C++E E +  Y+  ++P  +    
Sbjct: 577 QY-------------VNQWWQTH---IRETFDL--PCALELEFETHYRRFLMPTIRGAEQ 618

Query: 920 LIKKRYA--VFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFLH 964
             KKRYA  +    G     KG E  R     L + FQ EL+ K   
Sbjct: 619 GSKKRYAGLISTPAGDQMIYKGLETVRTDWTPLAQQFQRELYLKIFQ 665


>gi|375266057|ref|YP_005023500.1| DNA polymerase II [Vibrio sp. EJY3]
 gi|369841378|gb|AEX22522.1| DNA polymerase II [Vibrio sp. EJY3]
          Length = 787

 Score = 55.5 bits (132), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 50/197 (25%), Positives = 82/197 (41%), Gaps = 35/197 (17%)

Query: 777 AHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWC 836
           A K I+NSFYG +   G R++   +A  +T  G +I++  ++LIE+ G          + 
Sbjct: 494 AIKIIMNSFYGVLGSSGCRFFDTRLASSITMRGHEIMKQTKVLIEEQG----------YQ 543

Query: 837 VLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETH--S 894
           V+ G     F                 V LN   ++   +     LVD ++  ++ H  S
Sbjct: 544 VIYGDTDSTF-----------------VSLNRTYSQAEADKVGNQLVDHINNWWQEHLRS 586

Query: 895 ECS----IEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAEL--KGFEIKRRGEL 948
           E +    +E E +  Y+  ++P  +      KKRYA    +G    +  KG E  R    
Sbjct: 587 EYNLTSMLEIEYETHYRKFLMPTIRGAETGSKKRYAGLIGEGANERIIFKGLESARTDWT 646

Query: 949 KLIKVFQAELFDKFLHG 965
            L + FQ  L+    HG
Sbjct: 647 PLAQRFQNTLYGMIFHG 663


>gi|332532179|ref|ZP_08408060.1| DNA polymerase II [Pseudoalteromonas haloplanktis ANT/505]
 gi|332038277|gb|EGI74722.1| DNA polymerase II [Pseudoalteromonas haloplanktis ANT/505]
          Length = 780

 Score = 55.5 bits (132), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 53/195 (27%), Positives = 84/195 (43%), Gaps = 23/195 (11%)

Query: 774 LQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDG 833
           L  A K I+NS YG +  KG R+Y   ++  +T  G +I+   +  IE++G         
Sbjct: 488 LSQAIKIIMNSLYGVLGSKGCRFYDPRLSSSITLRGHEIMLQTKKWIEELG--------- 538

Query: 834 IWCVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETH 893
            + V+ G     F      L  +LT    C  + V +A+  T D     ++ + +T+   
Sbjct: 539 -YSVIYGDTDSTFI----KLDDELTPD-ECNEIGVFLAKKITTD----WINEIKQTHNLT 588

Query: 894 SECSIEFEVDGPYKAMILPASKEEGILIKKRYA--VFNDDGTLAELKGFEIKRRGELKLI 951
           S   IEFE    Y    LP  + + +  KKRY   +   + +    KG E  R    KL 
Sbjct: 589 SHLEIEFE--SLYSPFFLPTIRGKLVGSKKRYVGKLIKPNESKLVFKGLETVRSDWTKLA 646

Query: 952 KVFQAELFDKFLHGS 966
           + FQ +LF     G+
Sbjct: 647 QQFQFDLFTSLFDGN 661


>gi|407464943|ref|YP_006775825.1| DNA polymerase I [Candidatus Nitrosopumilus sp. AR2]
 gi|407048131|gb|AFS82883.1| DNA polymerase I [Candidatus Nitrosopumilus sp. AR2]
          Length = 852

 Score = 55.5 bits (132), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 69/266 (25%), Positives = 114/266 (42%), Gaps = 32/266 (12%)

Query: 297 EFEGYFKVT--NVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMS 354
           E E   K+T    + E E+++  F  M+   P + +TYNGD FD P+L  RA   G K S
Sbjct: 255 ELEQNIKITFYESDKEKEMIQDAFEIMKTF-PFV-LTYNGDEFDLPYLYNRAERLGVKNS 312

Query: 355 EELGFQCDKNQGECRAKFACHLDCFAWVKRDSY-LPQGSQ-----GLKAVTKAKLGYDPL 408
           +   +     +     K   HLD +  +   S+ +   SQ      L +V+KA LG + +
Sbjct: 313 DNPLYMM---RDSATLKEGVHLDLYKVLSNRSFQIYAFSQKYTDFSLNSVSKALLGKEKI 369

Query: 409 EVNPEDMVRFAKEKPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIP----MSPDEVL 464
           +   E    F +      A+Y  +DA+ TY L  ++    +  L  II     M  D++ 
Sbjct: 370 DYGLE----FDELSLYQTANYCYNDALLTYEL-TSFNKDLMMDLLVIIARIGRMPIDDIA 424

Query: 465 RKGSGTLCEMLLMVQAYKANVICPNKH--QSDPEKFYRNHLLESETYIGGHVECLESGV- 521
           R G       LL  +  + N + P +   Q   E    + +++ + Y GG V   + G+ 
Sbjct: 425 RMGVSQWIRSLLYYEHRRENCLIPKREELQRRSEGVMSDAVIKDKKYRGGLVVEPKEGIH 484

Query: 522 -------FRSDLPTSFKLDPSAYEQL 540
                  F S  P+  K+   +YE +
Sbjct: 485 FDVVVMDFASLYPSIIKVRNLSYETV 510


>gi|388580039|gb|EIM20357.1| putative delta DNA polymerase [Wallemia sebi CBS 633.66]
          Length = 1060

 Score = 55.5 bits (132), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 78/345 (22%), Positives = 130/345 (37%), Gaps = 90/345 (26%)

Query: 47  LTFASSSLEDEDTRKVYSCIDLYFVSQDG-STFKSKYKFRPYFYAA-----TKEKMEMDV 100
           + F    LE+         I ++ V+QDG S   +   F PY Y A     TKE+ E   
Sbjct: 68  IIFQQIDLEEASIPGAEPFIRMHGVTQDGYSVMANVTGFLPYLYIAAPRGFTKEECE-GF 126

Query: 101 EAYLRRRYESQ----IADIEILEKEDLDLKNHLSGLHKS-YLKISFDTVQQLMDVKKDLL 155
             YL   + +     +AD+E+  K  L       G  KS ++KI+F   + +  V+    
Sbjct: 127 SGYLNATFGNNGKRIVADMEMHTKRSL---WGYKGDEKSPFIKITFVDQRSMTRVRG--- 180

Query: 156 HVVERNQAKFDAAEAYESILTGKREQRPQDFLDCIVDLREYDVPYHIRFAIDNDVRCGQW 215
              ER +  F                  ++F D  +   E ++ Y +RF ID  V    W
Sbjct: 181 -CFERGEIHF------------------REFFDDAIQTYESNISYDLRFMIDKKVVGMSW 221

Query: 216 -------YDVSISSTGPLLEKRVDL----------------LQRAEVHVCAFDIETTKLP 252
                  Y++  +ST  + + +++                  + A + + +FDIE     
Sbjct: 222 IECPGGAYNLK-ASTSKVSKAQLEFDIHHKDIIAHPAEGEWQKMAPLRILSFDIECAGRQ 280

Query: 253 LKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYF---------- 302
             FP+A  D ++ I+ M+  QG                    KP     F          
Sbjct: 281 GIFPEAQIDPVIQIANMVTRQG------------------ESKPFIRNVFTLKSCAHIAG 322

Query: 303 -KVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRA 346
            +V +  +E ++L  W   ++E  P + + YN   FD P+L  RA
Sbjct: 323 SQVLSFEDESKMLNAWRDFVEEADPDVVIGYNTSNFDIPYLMDRA 367


>gi|336123938|ref|YP_004565986.1| DNA polymerase II [Vibrio anguillarum 775]
 gi|335341661|gb|AEH32944.1| DNA polymerase II [Vibrio anguillarum 775]
          Length = 792

 Score = 55.5 bits (132), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 48/198 (24%), Positives = 82/198 (41%), Gaps = 37/198 (18%)

Query: 777 AHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIG-KPLELDTDGIW 835
           A K I+NSFYG +   G R++   +A  +T  G +I++  + LIE  G + +  DTD  +
Sbjct: 499 AIKIIMNSFYGVLGSSGCRFFDTRLASSITMRGHEIMKQTKKLIEAQGYQVIYGDTDSTF 558

Query: 836 CVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETH-- 893
             L G +                            ++   +   + LV+ +++ + TH  
Sbjct: 559 VSLGGQY----------------------------SQQQADRVGKQLVEHINQWWTTHLR 590

Query: 894 ----SECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAEL--KGFEIKRRGE 947
                E  +E E +  Y+  ++P  +      KKRYA    +G    L  KG E  R   
Sbjct: 591 EEYRLESMLELEYETHYRKFLMPTIRGSETGSKKRYAGLIGEGENERLIFKGLESARTDW 650

Query: 948 LKLIKVFQAELFDKFLHG 965
             L + FQ +L+    +G
Sbjct: 651 TPLAQRFQHQLYSMIFNG 668


>gi|119719216|ref|YP_919711.1| DNA polymerase I [Thermofilum pendens Hrk 5]
 gi|119524336|gb|ABL77708.1| replicative DNA polymerase I [Thermofilum pendens Hrk 5]
          Length = 835

 Score = 55.5 bits (132), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 58/209 (27%), Positives = 89/209 (42%), Gaps = 27/209 (12%)

Query: 242 CAFDIETTKLPLKFPD---ADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEF 298
            A DIE    P   P+   AD  +I +  Y  D +G L++ R     DI  LE       
Sbjct: 186 VAIDIEVDSPPGIVPNPEKADRAVIAVSYYSDDRKGVLLLKR---SNDIPKLE------- 235

Query: 299 EGYFKVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELG 358
           +   ++T   NE ELL+  F  M      + +T+NGD FD P+L  RA   G +  EE+ 
Sbjct: 236 QNDAEITVFENEKELLQAAFKIMTSYP--VVLTFNGDNFDLPYLLNRALKLGLR-EEEIP 292

Query: 359 FQCDKNQGECRAKFACHLDCFAWVKRDSYLPQG-------SQGLKAVTKAKLGYDPLEVN 411
            +          K + H+D + +    S             + L  V+ A LG    +V 
Sbjct: 293 IEWSPRSDYAEIKGSIHIDLYKFFTNKSMRVYAFGNKYREGRTLDEVSMALLGIG--KVK 350

Query: 412 PEDMVRFAKEKPQMMASYSVSDAVATYYL 440
            E+ +  ++  P+ +  YS+ DA  TY L
Sbjct: 351 HEEAI--SEMTPERLVEYSLRDAELTYKL 377


>gi|410670688|ref|YP_006923059.1| DNA polymerase Pol2 [Methanolobus psychrophilus R15]
 gi|409169816|gb|AFV23691.1| DNA polymerase Pol2 [Methanolobus psychrophilus R15]
          Length = 913

 Score = 55.1 bits (131), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 71/275 (25%), Positives = 118/275 (42%), Gaps = 30/275 (10%)

Query: 770  LYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIE-KIGKPLE 828
            + D+ QLA K +LNSFYGY     AR YS+ +A  VT  G + I N R +I   I K + 
Sbjct: 547  VLDATQLALKILLNSFYGYSGYTRARLYSLPLANAVTSFGRENILNTRSIINGTINKVIL 606

Query: 829  LDTDGIWCVLPGSFPENFTFKTKDLKKKLTISYP---CVMLNVDVARNNTNDQYQTLVDP 885
             D+  ++        E  T KT D    L++ Y     V +      + + D    + + 
Sbjct: 607  RDSKVLFT------EEVDTPKTGDRMISLSVVYGDTDSVFVQCTSKNDISLDDAGLVGNR 660

Query: 886  VSKTYETHSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVF----NDDG--TLAELKG 939
            ++ T        +E E +   K  +L        L KKRYA++    + DG     ++KG
Sbjct: 661  IAGTVSASLPDPMELEFESIAKRGLL--------LAKKRYAIWVFERSGDGWKDSIKVKG 712

Query: 940  FEIKRRGELKLIKVFQAELFDKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELI 999
             E  RR   +L       + +  L    +E   + V  V +R  ++   + KDI     I
Sbjct: 713  METVRRDWCELTSKTLNRVLELVLKEGKVEAAVAHVREVVDRVRNIDVRKDKDI-----I 767

Query: 1000 DYISESSTMSKSLADYGEQKSCAVTTARRLSDFLG 1034
            D ++ +   SK+ + Y + K   +T   ++ +  G
Sbjct: 768  DDLTMTRMFSKNASRY-KNKQPHITVVEKIEERTG 801


>gi|398980394|ref|ZP_10688953.1| DNA polymerase elongation subunit (family B) [Pseudomonas sp. GM25]
 gi|398134597|gb|EJM23744.1| DNA polymerase elongation subunit (family B) [Pseudomonas sp. GM25]
          Length = 787

 Score = 55.1 bits (131), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 54/198 (27%), Positives = 84/198 (42%), Gaps = 34/198 (17%)

Query: 774 LQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPL---ELD 830
           L  A K I+N+FYG +   G R++   +A  +T  G +I+   R LIE  G  +   + D
Sbjct: 490 LSQALKIIMNAFYGVLGSSGCRFFDTRLASSITLRGHEIMLRTRQLIEAQGHAVIYGDTD 549

Query: 831 TDGIWCVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTY 890
           +  +W   P              ++  TI    V    D  R +  +QY           
Sbjct: 550 STFVWLRRP-----------HGQEEAATIGRALVAHVNDWWREHVREQYGL--------- 589

Query: 891 ETHSECSIEFEVDGPYKAMILPASK--EEGILIKKRYA--VFNDDGTLAEL-KGFEIKRR 945
               E ++E + +  YK  ++P  +  EEG   KKRYA  V   DG+   + KG E  R 
Sbjct: 590 ----ESALELQFETHYKRFLMPTIRGAEEG--SKKRYAGLVTRTDGSEEMVYKGLETVRT 643

Query: 946 GELKLIKVFQAELFDKFL 963
               L + FQ EL+++  
Sbjct: 644 DWSLLARQFQQELYERIF 661


>gi|304396540|ref|ZP_07378421.1| DNA-directed DNA polymerase [Pantoea sp. aB]
 gi|304356049|gb|EFM20415.1| DNA-directed DNA polymerase [Pantoea sp. aB]
          Length = 784

 Score = 55.1 bits (131), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 79/355 (22%), Positives = 131/355 (36%), Gaps = 68/355 (19%)

Query: 725  VDTVRSFRDRRYEYKG------LNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAH 778
             D++  FR+ R+          + ++W G+         + K Q+ Q        L  A 
Sbjct: 448  ADSIEGFREARFSRHTHCLPAIVEQIWLGR--------EAAKKQKNQ-------PLSQAL 492

Query: 779  KCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIG-KPLELDTDGIWCV 837
            K I+N+FYG +     R++   +A  +T  G  I+Q  R LIE  G   +  DTD  +  
Sbjct: 493  KIIMNAFYGVLGTSACRFFDPRLASSITLRGHAIMQQTRALIEAEGYDVIYGDTDSTFVW 552

Query: 838  LPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECS 897
            L  +  E    +   + ++L       +  V+    +   Q   L   +   YE H    
Sbjct: 553  LKSAHSEE---QAAAIGQQL-------VQKVNAWWRDHLQQTHGLTSALELEYENH---- 598

Query: 898  IEFEVDGPYKAMILPASKEEGILIKKRYAVFNDD--GTLAELKGFEIKRRGELKLIKVFQ 955
                    +   ++P  +      KKRYA    D  G     KG E  R     L K FQ
Sbjct: 599  --------FCRFLMPTIRGAEQGSKKRYAGLIRDAAGERMVFKGLESVRTDWTPLAKAFQ 650

Query: 956  AELFDKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLADY 1015
             +L+ +  H                 W D +      +   EL D +     + + L +Y
Sbjct: 651  QQLYHRIFHREP--------------WQDYIRTTVAQLLAGELDDQLIYKKRLRRPLKEY 696

Query: 1016 GEQKSCAVTTARRLSD----FLGDTMVKDKGLRCQYIVACE-PQGTPVSERAVPV 1065
             E+       A RL+D     L   +    G R +Y++A   P+  P+  R+ P+
Sbjct: 697  -ERNVPPHVRAARLADEQNRKLNRPLQYQNGGRIRYVIATAGPE--PLEARSTPL 748


>gi|170721087|ref|YP_001748775.1| DNA polymerase II [Pseudomonas putida W619]
 gi|169759090|gb|ACA72406.1| DNA-directed DNA polymerase [Pseudomonas putida W619]
          Length = 786

 Score = 55.1 bits (131), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 75/338 (22%), Positives = 127/338 (37%), Gaps = 64/338 (18%)

Query: 727  TVRSFRDRRYEYKG------LNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHKC 780
            +V  FR  R+          + +VW+G+   AK  GN+               L  A K 
Sbjct: 451  SVEGFRGARFSRSQHCLPAIVERVWQGR-EAAKREGNA--------------PLSQALKI 495

Query: 781  ILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIG-KPLELDTDGIWCVLP 839
            I+N+FYG +   G R++   +A  +T  G +I++  R LIE  G + +  DTD  +  L 
Sbjct: 496  IMNAFYGVLGSSGCRFFDPRLASSITMRGHQIMRQTRALIEDKGYEVIYGDTDSTFVWLK 555

Query: 840  GSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIE 899
            G+  E              I +  V       R +  +Q                E ++E
Sbjct: 556  GAHGE---------AAAAQIGHELVAHVNRWWREHLREQMNL-------------ESALE 593

Query: 900  FEVDGPYKAMILPASKEEGILIKKRYA--VFNDDGTLAEL-KGFEIKRRGELKLIKVFQA 956
             + +  Y+  ++P  +      KKRYA  V   DG+   + KG E  R     L + FQ 
Sbjct: 594  LQFEVHYRRFLMPTIRGTDEGSKKRYAGLVQRTDGSENVVYKGLESVRTDWSALAQQFQQ 653

Query: 957  ELFDKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLADYG 1016
            EL+ +   G                + D + +  +     +L + +     + + LADY 
Sbjct: 654  ELYGRIFRGQP--------------YRDYVRHYVQQTLAGDLDNLLVYRKRLRRPLADYQ 699

Query: 1017 EQKSCAVTTARRLSDF---LGDTMVKDKGLRCQYIVAC 1051
                  V  AR+  ++   LG      +G    Y++  
Sbjct: 700  RNVPPHVRAARQADEYNSRLGRPRQYQRGGWISYVITT 737


>gi|398989486|ref|ZP_10692727.1| DNA polymerase elongation subunit (family B) [Pseudomonas sp. GM24]
 gi|399015858|ref|ZP_10718115.1| DNA polymerase elongation subunit (family B) [Pseudomonas sp. GM16]
 gi|398107340|gb|EJL97342.1| DNA polymerase elongation subunit (family B) [Pseudomonas sp. GM16]
 gi|398147644|gb|EJM36347.1| DNA polymerase elongation subunit (family B) [Pseudomonas sp. GM24]
          Length = 787

 Score = 55.1 bits (131), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 64/267 (23%), Positives = 105/267 (39%), Gaps = 48/267 (17%)

Query: 774  LQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPL---ELD 830
            L  A K I+N+FYG +   G R++   +A  +T  G +I+   R LIE+ G  +   + D
Sbjct: 490  LSQALKIIMNAFYGVLGSSGCRFFDTRLASSITLRGHEIMLRTRKLIEEQGHAVIYGDTD 549

Query: 831  TDGIWCVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTY 890
            +  +W   P              ++  +I +  V    D  R +  D+Y           
Sbjct: 550  STFVWLRRP-----------HGQEEAASIGHALVKHVNDWWRAHVRDEYGL--------- 589

Query: 891  ETHSECSIEFEVDGPYKAMILPASK--EEGILIKKRYA--VFNDDGTLAEL-KGFEIKRR 945
                E ++E + +  YK  ++P  +  EEG   KKRYA  V   DG+   + KG E  R 
Sbjct: 590  ----ESALELQFEIHYKRFLMPTIRGAEEG--SKKRYAGLVTRADGSDEMVYKGLETVRT 643

Query: 946  GELKLIKVFQAELFDKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISES 1005
                L + FQ EL+++       +              D + +  +     E  D +   
Sbjct: 644  DWSLLARQFQQELYERIFQRKPYQ--------------DFVRDYVRKTLAGEFDDRLVYR 689

Query: 1006 STMSKSLADYGEQKSCAVTTARRLSDF 1032
              + ++L DY       V  AR   DF
Sbjct: 690  KRLRRTLDDYERNVPPHVRAARLADDF 716


>gi|301090780|ref|XP_002895592.1| DNA polymerase delta catalytic subunit [Phytophthora infestans
           T30-4]
 gi|262097769|gb|EEY55821.1| DNA polymerase delta catalytic subunit [Phytophthora infestans
           T30-4]
          Length = 1609

 Score = 55.1 bits (131), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 77/344 (22%), Positives = 132/344 (38%), Gaps = 56/344 (16%)

Query: 195 EYDVPYHIRFAIDNDVRCGQWYDV--------SISSTGPLLEKRVDLL------------ 234
           E +VP+ +RF ID ++R   W +         S +    L +  +D+             
Sbjct: 186 ESNVPFILRFMIDEEIRGCNWVEAPTGTYSVRSAAQKKSLCQLEIDITYDNLVSHAPEGK 245

Query: 235 --QRAEVHVCAFDIETTKLPLKFPDADYDIIMMISYMLDGQG-YLIINRECVGEDIEDLE 291
             + A   + +FDIE       FP+A+ D ++ I+ ++  QG +  I R     D     
Sbjct: 246 WGKVAPFRILSFDIECMGRKGHFPEAEQDPVIQIANVVQEQGSHTPIIRNVFVLD----- 300

Query: 292 YTPKPEFEGYFKVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGF 351
            T KP    +  V     E ++L  W   +QEV P I   YN   FD P++  R      
Sbjct: 301 -TCKPIVGAH--VMEFEKEGDMLESWARFVQEVDPDIITGYNIANFDIPYVLNRGKALKL 357

Query: 352 KMSEELGFQCDKNQGECRAKFA-----------------CHLDCFAWVKRDSYLPQGSQG 394
           +    LG   +      +  F+                 C  D    ++R   L   S  
Sbjct: 358 QNYNLLGRLANSAAYMEKKTFSSAQYGKSENVKTTIHGRCMFDLLPIMRRSQNL--SSYS 415

Query: 395 LKAVTKAKLGYDPLEVNP---EDMVRFAKEKPQMMASYSVSDAVATYYLY--MTYVHPFI 449
           L AV+ A LG    +V      D+ R   +    +A Y + DA     L   ++Y+  FI
Sbjct: 416 LNAVSAAFLGQQKEDVPHGIISDLQRGTDDDRHRLAVYCLKDAYLPLRLLDKLSYLVNFI 475

Query: 450 FSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVICPNKHQS 493
             +A +  +  D ++ +G       +L+ +   A+++ P   +S
Sbjct: 476 -EMARVSGVPIDFLIERGQQIKVFSMLLRKCKDASLVVPTLPRS 518


>gi|443721192|gb|ELU10603.1| hypothetical protein CAPTEDRAFT_48797, partial [Capitella teleta]
          Length = 573

 Score = 55.1 bits (131), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 60/240 (25%), Positives = 102/240 (42%), Gaps = 44/240 (18%)

Query: 732 RDRRYEYKGLNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHKCILNSFYGYVMR 791
           R+R +  + + ++W+ +  +AKA  ++ + Q              A K ++NSFYG +  
Sbjct: 356 RERHFLPEIITQLWQQR-DQAKAEQDNARSQ--------------AIKILMNSFYGVLGS 400

Query: 792 KGARWYSMEMAGVVTYTGAKIIQNARLLIEKIG-KPLELDTDGIWCVLPGSFPENFTFKT 850
            G R+Y   +A  +T  G +I+      +E+ G + +  DTD I+ +L     EN +   
Sbjct: 401 GGCRFYDTRLASSITMRGHEIMVQTSTWVEENGHQVIYGDTDSIFVLL----EENLSHDE 456

Query: 851 KD-LKKKLTISYPCVMLNVDVARNNTNDQYQTLV-DPVSKTYETHSECSIEFEVDGPYKA 908
            D + ++L                + N ++Q L+ D +         C +E E +  Y+ 
Sbjct: 457 ADEIGQQLA--------------TDINRRWQALLKDSLGLI------CYLEMEYETHYRR 496

Query: 909 MILPASKEEGILIKKRYAVFNDDGTLAEL--KGFEIKRRGELKLIKVFQAELFDKFLHGS 966
            ++P  +      KKRYA         EL  KG E  R     L + FQAEL      GS
Sbjct: 497 FLMPTIRGSETGSKKRYAGLKVGNRSEELVCKGLETVRSDWTPLARAFQAELLRLVFAGS 556


>gi|420257176|ref|ZP_14759942.1| DNA polymerase II [Yersinia enterocolitica subsp. enterocolitica
           WA-314]
 gi|404515321|gb|EKA29090.1| DNA polymerase II [Yersinia enterocolitica subsp. enterocolitica
           WA-314]
          Length = 790

 Score = 55.1 bits (131), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 58/233 (24%), Positives = 94/233 (40%), Gaps = 52/233 (22%)

Query: 741 LNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHKCILNSFYGYVMRKGARWYSME 800
           +N++W+G+   AK   N                L  A K I+N+FYG +   G R++   
Sbjct: 476 VNQIWQGR-EAAKRQQNK--------------PLSQALKIIMNAFYGVLGSSGCRFFDPR 520

Query: 801 MAGVVTYTGAKIIQNARLLIEKIG-KPLELDTDGIWCVLPGSFPENFTFKTKDLKKKLTI 859
           +A  +T  G +I++  R LIE  G + +  DTD  +  L  +  E         ++  +I
Sbjct: 521 LASSITMRGHEIMRKTRELIEARGYQVIYGDTDSTFVWLKNAHSE---------EQAASI 571

Query: 860 SYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSE------CSIEFEVDGPYKAMILPA 913
                               Q LV  V++ ++TH        C++E E +  Y+  ++P 
Sbjct: 572 G-------------------QELVQYVNQWWQTHIRETFDLPCALELEFETHYRRFLMPT 612

Query: 914 SKEEGILIKKRYA--VFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFLH 964
            +      KKRYA  +    G     KG E  R     L + FQ EL+ K   
Sbjct: 613 IRGAEQGSKKRYAGLISTPAGDQMIYKGLETVRTDWTPLAQQFQRELYLKIFQ 665


>gi|421505200|ref|ZP_15952139.1| DNA polymerase II [Pseudomonas mendocina DLHK]
 gi|400344026|gb|EJO92397.1| DNA polymerase II [Pseudomonas mendocina DLHK]
          Length = 786

 Score = 55.1 bits (131), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 68/256 (26%), Positives = 101/256 (39%), Gaps = 51/256 (19%)

Query: 727 TVRSFRDRRYEYKG------LNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHKC 780
           +V  FR  R+          + +VW+G+   AK  GN+              +L  A K 
Sbjct: 451 SVEGFRGARFSRSRHCLPAIVERVWQGR-EAAKRDGNA--------------ALSQALKI 495

Query: 781 ILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKP-LELDTDGIWCVLP 839
           I+N+FYG +   G R++   +A  +T  G +I++  R LIE  G   +  DTD  +  L 
Sbjct: 496 IMNAFYGVLGSSGCRFFDPRLASSITLRGHQIMRRTRELIEAEGHAVIYGDTDSTFVWLG 555

Query: 840 GSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIE 899
                    +  D  +   I    V       R +  D+Y  L   +   +ETH      
Sbjct: 556 ---------RAHDETEAAQIGRALVARVNAWWREHLADEY-GLTSALELQFETH------ 599

Query: 900 FEVDGPYKAMILPA--SKEEGILIKKRYA--VFNDDGT-LAELKGFEIKRRGELKLIKVF 954
                 Y+  ++P     EEG   KKRYA  V   DG+     KG E  R     L + F
Sbjct: 600 ------YRRFLMPTIRGTEEG--SKKRYAGLVRAADGSERMVFKGLETVRSDWSPLAQRF 651

Query: 955 QAELFDKFLHGSTIEE 970
           Q EL+     G   E+
Sbjct: 652 QQELYRLVFAGQPYED 667


>gi|365833824|ref|ZP_09375276.1| DNA polymerase II [Hafnia alvei ATCC 51873]
 gi|364570872|gb|EHM48473.1| DNA polymerase II [Hafnia alvei ATCC 51873]
          Length = 784

 Score = 55.1 bits (131), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 58/244 (23%), Positives = 98/244 (40%), Gaps = 52/244 (21%)

Query: 741 LNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHKCILNSFYGYVMRKGARWYSME 800
           ++++W+G+   AK   N+               L  A K I+N+FYG +   G R++   
Sbjct: 474 VSQIWQGR-EAAKREKNT--------------PLSQALKIIMNAFYGVLGSSGCRFFDPR 518

Query: 801 MAGVVTYTGAKIIQNARLLIEKIGKPLEL-DTDGIWCVLPGSFPENFTFKTKDLKKKLTI 859
           +A  +T  G +I++  R LIE  G P+   DTD  +  L          +  D ++   I
Sbjct: 519 LASSITMRGHEIMRRTRELIEAEGYPVIYGDTDSTFVWLN---------RAHDEQQAAAI 569

Query: 860 SYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETH------SECSIEFEVDGPYKAMILPA 913
                               Q L+  V++ ++ H       E ++E E +  Y+  ++P 
Sbjct: 570 G-------------------QHLITVVNQWWKEHLRTEYGLESALELEYECHYRRFLMPT 610

Query: 914 SKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFLHGSTIEECYS 973
            +   +  KKRYA    D  +   KG E  R     L + FQ EL+ +       +E   
Sbjct: 611 IRGAELGSKKRYAGLKGDEMV--YKGMETVRSDWTPLAQQFQQELYQRIFLKQPYQEFIR 668

Query: 974 AVAA 977
             AA
Sbjct: 669 DYAA 672


>gi|440760765|ref|ZP_20939868.1| DNA polymerase II [Pantoea agglomerans 299R]
 gi|436425518|gb|ELP23252.1| DNA polymerase II [Pantoea agglomerans 299R]
          Length = 784

 Score = 55.1 bits (131), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 79/355 (22%), Positives = 131/355 (36%), Gaps = 68/355 (19%)

Query: 725  VDTVRSFRDRRYEYKG------LNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAH 778
             D++  FR+ R+          + ++W G+         + K Q+ Q        L  A 
Sbjct: 448  ADSIEGFREARFSRHTHCLPAIVEQIWLGR--------EAAKKQKNQ-------PLSQAL 492

Query: 779  KCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIG-KPLELDTDGIWCV 837
            K I+N+FYG +     R++   +A  +T  G  I+Q  R LIE  G   +  DTD  +  
Sbjct: 493  KIIMNAFYGVLGTSACRFFDPRLASSITLRGHAIMQQTRALIEAEGYDVIYGDTDSTFVW 552

Query: 838  LPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECS 897
            L  +  E    +   + ++L       +  V+    +   Q   L   +   YE H    
Sbjct: 553  LKSAHSEE---QAAAIGQQL-------VQKVNAWWRDHLQQTHGLTSALELEYENH---- 598

Query: 898  IEFEVDGPYKAMILPASKEEGILIKKRYAVFNDD--GTLAELKGFEIKRRGELKLIKVFQ 955
                    +   ++P  +      KKRYA    D  G     KG E  R     L K FQ
Sbjct: 599  --------FCRFLMPTIRGAEQGSKKRYAGLIRDAAGERMVFKGLESVRTDWTPLAKAFQ 650

Query: 956  AELFDKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLADY 1015
             +L+ +  H                 W D +      +   EL D +     + + L +Y
Sbjct: 651  QQLYHRIFHREP--------------WQDYIRTTVAQLLAGELDDQLIYKKRLRRPLKEY 696

Query: 1016 GEQKSCAVTTARRLSD----FLGDTMVKDKGLRCQYIVACE-PQGTPVSERAVPV 1065
             E+       A RL+D     L   +    G R +Y++A   P+  P+  R+ P+
Sbjct: 697  -ERNVPPHVRAARLADEQNRKLNRPLQYQNGGRIRYVIATAGPE--PLEARSTPL 748


>gi|90021158|ref|YP_526985.1| DNA polymerase II [Saccharophagus degradans 2-40]
 gi|89950758|gb|ABD80773.1| DNA damage-inducible DNA polymerase II [Saccharophagus degradans
           2-40]
          Length = 794

 Score = 55.1 bits (131), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 50/204 (24%), Positives = 83/204 (40%), Gaps = 25/204 (12%)

Query: 777 AHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIG-KPLELDTDGIW 835
           A K ++NSFYG +   G  +Y   +A  +T  G  I++     IE  G K +  DTD  +
Sbjct: 501 AIKILMNSFYGVLGSGGCPFYDTRLASSITMRGHDIMKQTAKWIEAEGYKVIYGDTDSTF 560

Query: 836 CVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSE 895
             L G +      + + + + L +                N+++Q L+       E   E
Sbjct: 561 VWLDGEYSNE---QAQAIGQSLQVL--------------INEKWQQLIRE-----EYRLE 598

Query: 896 CSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAEL--KGFEIKRRGELKLIKV 953
           C++E E +  +   I+P  +   +  KKRYA         EL  KG E  R     L K 
Sbjct: 599 CNLEIEFETHFSRFIMPTIRGSSLGSKKRYAGVKQTKQGGELVFKGLETVRSDWTALAKK 658

Query: 954 FQAELFDKFLHGSTIEECYSAVAA 977
           FQ +L+        +++    + A
Sbjct: 659 FQTQLYSMVFEDKNVKQYVQKIIA 682


>gi|390370603|ref|XP_001196001.2| PREDICTED: DNA polymerase alpha catalytic subunit, partial
            [Strongylocentrotus purpuratus]
          Length = 517

 Score = 55.1 bits (131), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 76/302 (25%), Positives = 124/302 (41%), Gaps = 60/302 (19%)

Query: 771  YDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIG-KPLEL 829
            YD  Q A K   NS YG +    +R+Y+  +A +VT  G +I+ + + L++K+    +  
Sbjct: 1    YDIRQKALKLTANSMYGCLGFSHSRFYAKPLAALVTSKGREILMHTKELVQKMNLDVIYG 60

Query: 830  DTDGIWCVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDP-VSK 888
            DTD I                              M+N +   ++T  +    V   V+K
Sbjct: 61   DTDSI------------------------------MINTNSTDHDTVFKLGNRVKTEVNK 90

Query: 889  TYETHSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFND----DGTL---AELKGFE 941
             Y       +E ++DG +++M+L        L KK+YA        DGTL    E+KG +
Sbjct: 91   LYRL-----LEIDIDGVFQSMLL--------LKKKKYAAITVERLLDGTLKTSKEMKGLD 137

Query: 942  IKRRGELKLIKVFQAELFDKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDY 1001
            I RR    L K   +   D+ L   + E        V N    L++   K  A +  +D 
Sbjct: 138  IVRRDWCDLAKKVGSYAIDQILSADSRE------VIVDNIHSHLVELGEKVAAGTIPLDQ 191

Query: 1002 ISESSTMSKSLADYGEQKSCA-VTTARRLSDFLGDTMVKDKGLRCQYIVACEPQGTPVSE 1060
               +  ++K+  DY ++KS   V  A RL+   G   +   G    YI+  +    P  +
Sbjct: 192  YEINKGLTKAPQDYPDKKSLPHVNVALRLNSQGGGKPI-GAGDTVSYIICVDGSNLPAGQ 250

Query: 1061 RA 1062
            RA
Sbjct: 251  RA 252


>gi|212557465|gb|ACJ29919.1| DNA polymerase B, exonuclease:DNA polymerase B region [Shewanella
            piezotolerans WP3]
          Length = 794

 Score = 55.1 bits (131), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 69/298 (23%), Positives = 119/298 (39%), Gaps = 45/298 (15%)

Query: 774  LQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIG-KPLELDTD 832
            L  A K I+NS YG +  +G  ++  ++A  +T  G +I++  R  IE+ G + +  DTD
Sbjct: 500  LSQAIKIIMNSLYGVLGSRGCVFHDAKLASSITMRGHEIMKQTRSWIEEEGFEVIYGDTD 559

Query: 833  GIWCVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQY-QTLVDPVSKTYE 891
              +  L   + E    + +   K+L               +  N Q+ Q L D      +
Sbjct: 560  STFVWLGNDYDEQ---QVQATGKRLA--------------SKVNQQWRQKLTD------D 596

Query: 892  THSECSIEFEVDGPYKAMILPASKEEGILIKKRYA----VFNDDGTLAELKGFEIKRRGE 947
               E  +E E +  ++   +P  +      KKRY         +  L   KG E  R   
Sbjct: 597  FKLESFLELEFETHFEQFFMPTLRGSAEGSKKRYVGTKLTVKGEKELI-FKGMEQVRSDW 655

Query: 948  LKLIKVFQAELFDKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESST 1007
              L +  Q EL+++  +   +E    +     NR            A SE + ++     
Sbjct: 656  SPLARRVQYELYERLFNHQDVEGYIKSTIEKLNRG-----------AYSEELIFV---KN 701

Query: 1008 MSKSLADYGEQKSCAVTTARRLSDFLGDTMVKDKGLRCQYIVACEPQGTPVSERAVPV 1065
            + ++L DY  + S  +  AR L D   D  V  +G R +Y++       PVS +  P+
Sbjct: 702  LRRNLEDYTAKSSPHLKAARLLFDATNDESVTKRGARIEYVMTIS-GAEPVSHQTSPI 758


>gi|324120744|dbj|BAJ78763.1| DNA polymerase delta catalytic subunit [Metylophorus sp. E-43]
          Length = 1036

 Score = 55.1 bits (131), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 37/112 (33%), Positives = 58/112 (51%), Gaps = 7/112 (6%)

Query: 237 AEVHVCAFDIETTKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKP 296
           A   + +FDIE       FP+ ++D ++ I+ M+  QG    + E    +I  L+ T  P
Sbjct: 240 APFRILSFDIECAGRKGVFPEPNHDPVIQIANMVIKQG----SAEPFIRNIFTLD-TCAP 294

Query: 297 EFEGYFKVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAH 348
                 +V   + E ELL+ W A ++EV P I+  YN + FD+P+L  RA H
Sbjct: 295 IIGS--QVLCFDKETELLKKWAAFVREVDPDIFTGYNINNFDFPYLINRAKH 344


>gi|317493310|ref|ZP_07951732.1| DNA polymerase family B [Enterobacteriaceae bacterium 9_2_54FAA]
 gi|316918703|gb|EFV40040.1| DNA polymerase family B [Enterobacteriaceae bacterium 9_2_54FAA]
          Length = 784

 Score = 54.7 bits (130), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 55/230 (23%), Positives = 94/230 (40%), Gaps = 52/230 (22%)

Query: 741 LNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHKCILNSFYGYVMRKGARWYSME 800
           ++++W+G+   AK   N+               L  A K I+N+FYG +   G R++   
Sbjct: 474 VSQIWQGR-EAAKREKNA--------------PLSQALKIIMNAFYGVLGSSGCRFFDPR 518

Query: 801 MAGVVTYTGAKIIQNARLLIEKIGKPLEL-DTDGIWCVLPGSFPENFTFKTKDLKKKLTI 859
           +A  +T  G +I++  R LIE  G P+   DTD  +  L          +  D ++   I
Sbjct: 519 LASSITMRGHEIMRRTRELIEAEGYPVIYGDTDSTFVWLN---------RAHDEQQAAAI 569

Query: 860 SYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETH------SECSIEFEVDGPYKAMILPA 913
                               Q L+  V++ ++ H       E ++E E +  Y+  ++P 
Sbjct: 570 G-------------------QHLITVVNQWWKEHLRTEYGLESALELEYECHYRRFLMPT 610

Query: 914 SKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFL 963
            +   +  KKRYA    D  +   KG E  R     L + FQ EL+ +  
Sbjct: 611 IRGAELGSKKRYAGLKGDEMV--YKGMETVRSDWTPLAQQFQQELYQRIF 658


>gi|383191646|ref|YP_005201774.1| DNA polymerase elongation subunit [Rahnella aquatilis CIP 78.65 =
           ATCC 33071]
 gi|371589904|gb|AEX53634.1| DNA polymerase elongation subunit (family B) [Rahnella aquatilis
           CIP 78.65 = ATCC 33071]
          Length = 780

 Score = 54.7 bits (130), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 57/232 (24%), Positives = 92/232 (39%), Gaps = 50/232 (21%)

Query: 741 LNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHKCILNSFYGYVMRKGARWYSME 800
           + ++W G+  EAK   N                L  A K I+N+FYG +   G R++   
Sbjct: 466 VRQIWMGR-EEAKKQKNK--------------PLSQALKIIMNAFYGVLGSSGCRFFDPR 510

Query: 801 MAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLPGSFPENFTFKTKDLKKKLTIS 860
           +A  +T  G  I++  R LIE  G          + V+ G     F              
Sbjct: 511 LASSITLRGHDIMRQTRELIEAEG----------YQVIYGDTDSTF-------------- 546

Query: 861 YPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHS------ECSIEFEVDGPYKAMILPAS 914
              V LN   ++   +   + LV+ V+  ++ H       E ++E E +  Y+  ++P  
Sbjct: 547 ---VWLNKARSQEEADAIGRRLVEQVNAWWKGHLQQEYGLESALELEFETHYQRFLMPTI 603

Query: 915 KEEGILIKKRYA--VFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFLH 964
           +      KKRYA  V + DG     KG E  R     L + FQ  L+++  H
Sbjct: 604 RGSETGSKKRYAGLVKDADGEHIVYKGLETVRTDWTPLAQEFQQALYERVFH 655


>gi|333908116|ref|YP_004481702.1| DNA polymerase B region [Marinomonas posidonica IVIA-Po-181]
 gi|333478122|gb|AEF54783.1| DNA polymerase B region [Marinomonas posidonica IVIA-Po-181]
          Length = 777

 Score = 54.7 bits (130), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 72/284 (25%), Positives = 117/284 (41%), Gaps = 49/284 (17%)

Query: 772  DSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIG-KPLELD 830
            D L  A K I+NSFYG +     R+Y  E+A  +T  G +I+Q  +  +E+ G   +  D
Sbjct: 482  DILSYAIKIIMNSFYGVLGSNVCRFYHAELASSITMRGHEILQLTKTWMEEKGANVIYGD 541

Query: 831  TDGIWCVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTY 890
            TD ++ VL     E                 P V+      ++   D  QTL        
Sbjct: 542  TDSLFVVLNDESAE-----------------PDVL-----GKHLCEDINQTLTAWCRDYA 579

Query: 891  ETHSECSIEFEVDGPYKAMILPA--SKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGEL 948
               S   +EFE    Y+   +P    +EEG   KKRYA   ++  +   KG E  R    
Sbjct: 580  NVDSHLELEFET--LYERFFMPTIRGQEEG--SKKRYAGKTNNKVV--FKGLEAARTDWT 633

Query: 949  KLIKVFQAELFDKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTM 1008
            KL + FQ  LFD   +    E   + + ++  +           +   +L +++  S  +
Sbjct: 634  KLAREFQRNLFDIVFND---ENPIAYIQSIIEQ-----------LKAGQLDEWLVYSKQL 679

Query: 1009 SKSLADYGEQKSCAVTTARRLSD---FLGDTMVKDKGL-RCQYI 1048
            S+ L++Y + K   V  A  + +    LG  +  +KG  R  Y+
Sbjct: 680  SRPLSEYSKHKPPHVRAAMMIDEKRASLGLPLEYNKGRKRIHYV 723


>gi|392307281|ref|ZP_10269815.1| DNA polymerase II [Pseudoalteromonas citrea NCIMB 1889]
          Length = 775

 Score = 54.7 bits (130), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 54/194 (27%), Positives = 84/194 (43%), Gaps = 25/194 (12%)

Query: 774 LQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIG-KPLELDTD 832
           L  A K I+NSFYG +   G R+Y   +A  +T  G +I+Q  ++ IE+ G   +  DTD
Sbjct: 485 LSQAIKIIMNSFYGVLGSTGCRFYDPRLASSITLRGHEIMQQTKVWIEEQGYDVIYGDTD 544

Query: 833 GIWCVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYET 892
             +  LP ++  +   +  ++ K LT              +  N+ +Q      ++ +  
Sbjct: 545 STFVCLPPAWNAS---RCNEVGKHLT--------------DFINNAWQAY---CAEHFNL 584

Query: 893 HSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAEL--KGFEIKRRGELKL 950
            S   IEFE    Y    LP  + E    KKRY    +     EL  KG E  R    K+
Sbjct: 585 QSYLEIEFETH--YSPFFLPTLRGEQKGSKKRYVGQVEREGKQELIYKGMETVRSDWTKV 642

Query: 951 IKVFQAELFDKFLH 964
            + +Q +LF  F  
Sbjct: 643 AQNYQRDLFTAFFQ 656


>gi|193214575|ref|YP_001995774.1| DNA polymerase B region [Chloroherpeton thalassium ATCC 35110]
 gi|193088052|gb|ACF13327.1| DNA polymerase B region [Chloroherpeton thalassium ATCC 35110]
          Length = 812

 Score = 54.7 bits (130), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 91/355 (25%), Positives = 144/355 (40%), Gaps = 81/355 (22%)

Query: 739  KGLNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHKCILNSFYGYVMRKGARWYS 798
            + L    K +  E K SGN    ++A D    YD++Q + K ++NS YGY+      +  
Sbjct: 473  RSLRFAAKARAKEEKKSGN----KQAADN---YDAMQNSFKILINSMYGYLGFSAGIFND 525

Query: 799  MEMAGVVTYTGAKIIQNARLLIEKIG-KPLELDTDGIWCVLPGSFPENFTFKTKDLKKKL 857
             E A  VT TG +I +   +  E+ G + +E+DTDGI+ + P                  
Sbjct: 526  YEEADRVTTTGQEIAKKMIVEFERRGCRIVEVDTDGIFLIPPDE---------------- 569

Query: 858  TISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEFEVDGPYKAMILPASKEE 917
                    +  + A  N       LV  VSKT        I    DG +K MI       
Sbjct: 570  --------IQGEEAEIN-------LVKDVSKTMPE----GITIGFDGRFKKMI------- 603

Query: 918  GILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFLHGSTIEECYSAVAA 977
               +KK Y + + DG + ++KG  +  R   +  + F    F+  L    I         
Sbjct: 604  -SYMKKNYMLVDYDGKV-KIKGSSLVSRSGERFGREFVRRGFEYLLEEDII--------G 653

Query: 978  VANRWLDLLDNQGKDIADSEL-IDYISESSTMSKSLADY-----GEQKSCAVTTARRLSD 1031
            + N +++  +     I + E+ ID +S + TM  SL DY     G  +  AVT    +  
Sbjct: 654  LHNLYIEYREK----IINREMDIDDLSRTETMKTSLEDYKKDVRGGSRPKAVTYELAIR- 708

Query: 1032 FLGDTMVKDKGLRCQYIVACEPQGTPV-SERAVPVAIFETDA----EIMKFYLRK 1081
                 M   KG R  Y ++    G+   S++   VA  E DA    + + FYL++
Sbjct: 709  ---SNMTVTKGDRITYYISGTGLGSGTFSDKGKLVA--EWDAKNPDQNVDFYLKR 758


>gi|182414614|ref|YP_001819680.1| DNA polymerase B region [Opitutus terrae PB90-1]
 gi|177841828|gb|ACB76080.1| DNA polymerase B region [Opitutus terrae PB90-1]
          Length = 735

 Score = 54.7 bits (130), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 82/332 (24%), Positives = 140/332 (42%), Gaps = 85/332 (25%)

Query: 752  AKASGNSIKIQEAQDMVVLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAK 811
            A+ S N ++  EAQ       + Q   K ++NSFYGY+   GAR+   E+A  VT  G +
Sbjct: 438  ARTSPNELERAEAQ-------ARQTNFKILINSFYGYLGFSGARFGDGELAAEVTRRGRE 490

Query: 812  IIQNARLLIEKIG-KPLELDTDGIWCVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDV 870
            ++Q       K G K LE DTDGI+        E++  K ++L   +             
Sbjct: 491  LLQTLIDEFAKHGCKILEADTDGIYLS-----SEHYYEKPEELLALVA------------ 533

Query: 871  ARNNTNDQYQTLVDPVSKTYETHSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFND 930
                      T++ P            IE E DG Y+AM    +K         YA+F  
Sbjct: 534  ----------TILPP-----------GIELEHDGSYRAMWCYKAKN--------YALF-- 562

Query: 931  DGTLAELKGFEIKRRGELKLIKVFQAELFDKFLHGSTIEECYSAVAAVANRWLDLLDNQG 990
            DG    L+G  ++ RG    I+ +  +L D+ ++          V A     LD L++  
Sbjct: 563  DGQRVILRGSALRSRG----IEPYLKKLSDQLIN--------YLVGASEQSPLDTLEDYR 610

Query: 991  KDIADSEL-IDYISESSTMSKSLADY-------GEQKSCAVTTARRLS--DFLGDTMVKD 1040
            K +A   + ++ +++S T+ ++   Y       G+ +  A   A +++    +GD +   
Sbjct: 611  KRLALRAVPVEELAKSETLGQNPDAYARFIEQGGKPRRAAAEAALQMTPRPRMGDRV--- 667

Query: 1041 KGLRCQYIVACEPQGTPVSERAVPVAIFETDA 1072
                  Y+ A     T   +RA P+A++E ++
Sbjct: 668  ----SYYVTARTKTRTNDWQRARPLALYEPES 695


>gi|424033329|ref|ZP_17772743.1| DNA polymerase B family protein [Vibrio cholerae HENC-01]
 gi|408874578|gb|EKM13746.1| DNA polymerase B family protein [Vibrio cholerae HENC-01]
          Length = 787

 Score = 54.7 bits (130), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 52/192 (27%), Positives = 80/192 (41%), Gaps = 25/192 (13%)

Query: 777 AHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIG-KPLELDTDGIW 835
           A K I+NSFYG +   G R++   +A  +T  G +I++  ++LIE  G + +  DTD  +
Sbjct: 494 AIKIIMNSFYGVLGSSGCRFFDTRLASSITMRGHEIMKQTKVLIEAKGYQVIYGDTDSTF 553

Query: 836 CVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSE 895
             L G + +       D  K   I    V        ++  D+Y  L   +   YETH  
Sbjct: 554 VSLNGPYSQ------ADADK---IGIELVEFINQWWGDHLRDEY-NLNSILELEYETH-- 601

Query: 896 CSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAEL--KGFEIKRRGELKLIKV 953
                     Y+  ++P  +      KKRYA    +G    +  KG E  R     L + 
Sbjct: 602 ----------YRKFLMPTIRGAETGSKKRYAGLIGEGEKERIIFKGLESARTDWTPLAQR 651

Query: 954 FQAELFDKFLHG 965
           FQ  L+    HG
Sbjct: 652 FQNTLYQMIFHG 663


>gi|423690967|ref|ZP_17665487.1| DNA polymerase II [Pseudomonas fluorescens SS101]
 gi|387998015|gb|EIK59344.1| DNA polymerase II [Pseudomonas fluorescens SS101]
          Length = 785

 Score = 54.7 bits (130), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 75/302 (24%), Positives = 121/302 (40%), Gaps = 50/302 (16%)

Query: 774  LQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIG-KPLELDTD 832
            L  A K I+N+FYG +   G R++   +A  +T  G +I++  R L+E  G + +  DTD
Sbjct: 488  LSQALKIIMNAFYGVLGSSGCRFFDTRLASSITLRGHQIMRQTRALVEAQGYEVIYGDTD 547

Query: 833  GIWCVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYET 892
              +  L GS         +D  +   I    V    D  R + +++Y  L   +   YET
Sbjct: 548  STFVWL-GS-----AHSAQDANR---IGLALVQHVNDWWRAHLSNEY-GLQSALELQYET 597

Query: 893  HSECSIEFEVDGPYKAMILPASK--EEGILIKKRYA--VFNDDGTLAEL-KGFEIKRRGE 947
            H            +   ++P  +  EEG   KKRYA  V  +DG+   + KG E  R   
Sbjct: 598  H------------FSRFLMPTIRGAEEG--SKKRYAGLVVREDGSEEMVYKGLETVRSDW 643

Query: 948  LKLIKVFQAELFDKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESST 1007
              L + FQ EL+ +  H    +              D + +  +     E  + +     
Sbjct: 644  SPLARQFQQELYQRIFHRQPHQ--------------DYIRDYVRRTLSGEFDELLIYRKR 689

Query: 1008 MSKSLADYGEQKSCAVTTAR---RLSDFLGDTMVKDKGLRCQYIVACE-PQGTPVSERAV 1063
            + + L DY       V  AR     +D LG      +G    Y+++   PQ  P+  R  
Sbjct: 690  LRRPLHDYERNVPPHVRAARLADEYNDRLGRPRQYQRGGWISYVISVNGPQ--PLEVRQA 747

Query: 1064 PV 1065
            P+
Sbjct: 748  PI 749


>gi|374289342|ref|YP_005036427.1| DNA polymerase II [Bacteriovorax marinus SJ]
 gi|301167883|emb|CBW27468.1| DNA polymerase II [Bacteriovorax marinus SJ]
          Length = 773

 Score = 54.7 bits (130), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 78/333 (23%), Positives = 133/333 (39%), Gaps = 58/333 (17%)

Query: 772  DSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIG-KPLELD 830
            + L +A K ++NSFYG +   G R+Y  ++   +T TG  I+  +    + +G + L  D
Sbjct: 482  EHLSMAIKILMNSFYGVMGSPGCRFYHADLPSAITGTGQWILLESIEFFKSLGYEVLYGD 541

Query: 831  TDGIWCVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTY 890
            TD ++  L          K++D+ K                +  +N+  +   + ++K  
Sbjct: 542  TDSVFVKL----------KSEDIYK---------------IKERSNELVRRANEFLTKKL 576

Query: 891  ETH--SECSIEFEVDGPYKAMILPASKEEGILIKKRY-AVFNDDGT-LAELKGFEIKRRG 946
            ET    E  +E E +  +K + LP+++      KKRY  +   +G       G E  R  
Sbjct: 577  ETRFGVESHLEMEFEKVFKKLFLPSARGGEGGAKKRYVGLLQGEGEDKLYFSGMEFVRSD 636

Query: 947  ELKLIKVFQAELFDKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESS 1006
              KL K FQ  LF K   G   E            ++D L N        E  D +    
Sbjct: 637  WTKLAKNFQYTLFKKIFQGEDYENFIKG-------YVDRLKN-------GEFDDLLIYRK 682

Query: 1007 TMSKSLADYGEQKSCAVTTARRLSDFLGDTMVKDKGLRCQYIVACEPQGTPVSERAVPVA 1066
             ++K +++Y +     V  A+  ++  G T +K      +YI+     G   SE   P  
Sbjct: 683  RLTKDISEYTKSIPPHVKAAKIYAEKTGQTNLKS----IEYIMTS--SGPYPSELDFPNV 736

Query: 1067 IFETDAEIMKFYLRKWCKTSSDVGIRSIVDWSY 1099
             +E        Y+ K  K  +D  +  I D S+
Sbjct: 737  DYEH-------YIEKQIKPLAD-SVLYIFDKSF 761


>gi|269137965|ref|YP_003294665.1| DNA polymerase II [Edwardsiella tarda EIB202]
 gi|387866700|ref|YP_005698169.1| DNA polymerase II [Edwardsiella tarda FL6-60]
 gi|267983625|gb|ACY83454.1| DNA polymerase II [Edwardsiella tarda EIB202]
 gi|304558013|gb|ADM40677.1| DNA polymerase II [Edwardsiella tarda FL6-60]
          Length = 779

 Score = 54.7 bits (130), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 62/281 (22%), Positives = 103/281 (36%), Gaps = 44/281 (15%)

Query: 774  LQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDG 833
            L  A K ++N+FYG +     R++   +A  +T  G +I++  R LIE  G         
Sbjct: 487  LSQALKILMNAFYGVLGTSACRFFDPRLASSITLRGHEIMRQTRSLIEAQG--------- 537

Query: 834  IWCVLPGSFPENFTF--KTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYE 891
             + V+ G     F +  K  D  +   I            R + + QY            
Sbjct: 538  -YAVIYGDTDSTFVWLGKPHDEAQAEAIGQALAERVNAWCREHLSQQYGL---------- 586

Query: 892  THSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLI 951
               E ++E E +  Y+  ++P  +   +  KKRYA    D  +   KG E  R     L 
Sbjct: 587  ---ESALELEYECHYRRFLMPTLRGADLGSKKRYAGLCGDRLV--FKGLETVRSDWTPLA 641

Query: 952  KVFQAELFDKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKS 1011
            + FQ EL+ +   G +              + D++      +   E  D +     + + 
Sbjct: 642  QRFQQELYRRVFLGQS--------------YRDVIRRYADGLLAGEFDDQLIYRKRLRRP 687

Query: 1012 LADYGEQKSCAVTTARRLSDF---LGDTMVKDKGLRCQYIV 1049
            LA+Y       V  AR   D+   LG  +    G    YI+
Sbjct: 688  LAEYQRNVPPHVRAARLADDYNHRLGRPLQYQNGGWISYII 728


>gi|119475072|ref|ZP_01615425.1| DNA polymerase II [marine gamma proteobacterium HTCC2143]
 gi|119451275|gb|EAW32508.1| DNA polymerase II [marine gamma proteobacterium HTCC2143]
          Length = 788

 Score = 54.7 bits (130), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 53/195 (27%), Positives = 85/195 (43%), Gaps = 27/195 (13%)

Query: 773 SLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLEL-DT 831
           +L  A K I+NSFYG +   G R++   +A  +T  G +IIQ   + IE+ G P+   DT
Sbjct: 496 ALSQAIKIIMNSFYGVLGTGGCRFFDSRLASSITRRGHQIIQQTAVFIEQQGWPVIYGDT 555

Query: 832 DGIWCVLPG-SFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTY 890
           D ++        P+  +   + L+ +L   +                 ++TL    SK Y
Sbjct: 556 DSVFVWFKDIDDPDQASSYGRQLESQLNHWW-----------------HETL----SKDY 594

Query: 891 ETHSECSIEFEVDGPYKAMILPASKEEGILIKKRYA--VFNDDGTLAELKGFEIKRRGEL 948
              S   IEF  +  Y+  ++P  +      KKRYA  V+         KG E  R    
Sbjct: 595 GIDSALEIEF--ETLYQRFLMPTVRGSDQGSKKRYAGVVWKHGKPQLVFKGLESVRTDWT 652

Query: 949 KLIKVFQAELFDKFL 963
           +L + FQ+EL+ +  
Sbjct: 653 RLARDFQSELYRRIF 667


>gi|324120724|dbj|BAJ78753.1| DNA polymerase delta catalytic subunit [Zorotypus sp. 154-1]
          Length = 999

 Score = 54.7 bits (130), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 39/122 (31%), Positives = 61/122 (50%), Gaps = 7/122 (5%)

Query: 237 AEVHVCAFDIETTKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKP 296
           A   + +FDIE       FP+ ++D I+ I+ M+  QG    + E    ++  L  T  P
Sbjct: 206 APFRILSFDIECAGRKGIFPEPEHDPIIQIANMVIRQG----DNEPFIRNVFTLN-TCAP 260

Query: 297 EFEGYFKVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEE 356
                 +V + N E ++L  W + ++EV P I+  YN + FD+P+L  RA H   K  E 
Sbjct: 261 IVGC--QVLSFNTEQKMLEAWSSFVREVDPDIFTGYNINNFDFPYLINRAKHLKVKDFEY 318

Query: 357 LG 358
           LG
Sbjct: 319 LG 320


>gi|70729848|ref|YP_259587.1| DNA polymerase II [Pseudomonas protegens Pf-5]
 gi|68344147|gb|AAY91753.1| DNA polymerase II [Pseudomonas protegens Pf-5]
          Length = 786

 Score = 54.7 bits (130), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 56/197 (28%), Positives = 84/197 (42%), Gaps = 30/197 (15%)

Query: 774 LQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIG-KPLELDTD 832
           L  A K I+N+FYG +   G R++   +A  +T  G +I+   R LIE  G + +  DTD
Sbjct: 489 LSQALKIIMNAFYGVLGSSGCRFFDPRLASSITLRGHEIMARTRQLIEAQGHQVIYGDTD 548

Query: 833 GIWCVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYET 892
             +  L G           D ++   I    V       R++   QY             
Sbjct: 549 STFVWLGG---------LHDEEQAGLIGRALVAHVNQWWRDHLQQQYGL----------- 588

Query: 893 HSECSIEFEVDGPYKAMILPASK--EEGILIKKRYA--VFNDDGTLAEL-KGFEIKRRGE 947
             E ++E + +  YK  ++P  +  EEG   KKRYA  V   DG+   + KG E  R   
Sbjct: 589 --ESALELQFETHYKRFLMPTIRGAEEG--SKKRYAGLVQRADGSQEMVYKGLETVRTDW 644

Query: 948 LKLIKVFQAELFDKFLH 964
             L + FQ EL+ +  H
Sbjct: 645 SPLAREFQQELYQRIFH 661


>gi|238786692|ref|ZP_04630493.1| DNA damage-inducible DNA polymerase II [Yersinia frederiksenii ATCC
           33641]
 gi|238725060|gb|EEQ16699.1| DNA damage-inducible DNA polymerase II [Yersinia frederiksenii ATCC
           33641]
          Length = 790

 Score = 54.7 bits (130), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 56/222 (25%), Positives = 91/222 (40%), Gaps = 40/222 (18%)

Query: 741 LNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHKCILNSFYGYVMRKGARWYSME 800
           +N++W+G+   AK   N                L  A K I+N+FYG +   G R++   
Sbjct: 476 VNQIWQGR-EAAKRQQNK--------------PLSQALKIIMNAFYGVLGSSGCRFFDPR 520

Query: 801 MAGVVTYTGAKIIQNARLLIEKIG-KPLELDTDGIWCVLPGSFPENFTFKTKDLKKKLTI 859
           +A  +T  G  I++  R LIE  G + +  DTD  +  L  +  E    +   + K L  
Sbjct: 521 LASSITLRGHDIMRQTRELIEAQGYQVIYGDTDSTFVWLKSAHSET---QASRIGKALV- 576

Query: 860 SYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEFEVDGPYKAMILPASKEEGI 919
                         + N  +Q     + +TY+    C++E E +  Y+  ++P  +    
Sbjct: 577 -------------QHVNQWWQAH---IRQTYDL--PCALELEFETHYRRFLMPTIRGAEQ 618

Query: 920 LIKKRYA--VFNDDGTLAELKGFEIKRRGELKLIKVFQAELF 959
             KKRYA  +    G     KG E  R     L + FQ EL+
Sbjct: 619 GSKKRYAGLISTPTGDQMIYKGLETVRTDWTPLAQQFQRELY 660


>gi|377577134|ref|ZP_09806117.1| DNA polymerase II [Escherichia hermannii NBRC 105704]
 gi|377541662|dbj|GAB51282.1| DNA polymerase II [Escherichia hermannii NBRC 105704]
          Length = 785

 Score = 54.7 bits (130), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 57/225 (25%), Positives = 92/225 (40%), Gaps = 38/225 (16%)

Query: 741 LNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHKCILNSFYGYVMRKGARWYSME 800
           ++++W G+  EAK  GN                L  A K I+N+FYG +     R++   
Sbjct: 471 VSQIWLGR-EEAKKHGNK--------------PLSQALKIIMNAFYGVLGTSACRFFDPR 515

Query: 801 MAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLPGSFPENFTFKTKDLKKKLTIS 860
           +A  +T  G  I++  + LIE  G          + V+ G     F +    LKK    +
Sbjct: 516 LASSITLRGHDIMRQTKALIEAEG----------FDVIYGDTDSTFVW----LKKPYDNA 561

Query: 861 YPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEFEVDGPYKAMILPASKEEGIL 920
           +   + N  VA+ N     Q   D + +T    S   +E+E    +   ++P  +   + 
Sbjct: 562 HASDIGNALVAKVN-----QWWRDHLRQTLNVESALELEYETH--FNRFLMPTIRGAEMG 614

Query: 921 IKKRYAVFNDDGTLAEL--KGFEIKRRGELKLIKVFQAELFDKFL 963
            KKRYA   +DG    +  KG E  R     L + FQ  L+ K  
Sbjct: 615 SKKRYAGLIEDGGEPRMVFKGLETVRTDWTPLAQNFQQALYLKIF 659



 Score = 47.0 bits (110), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 60/265 (22%), Positives = 108/265 (40%), Gaps = 29/265 (10%)

Query: 311 IELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMS----------EELGFQ 360
           +E L  WFA   E  P + + +N   FD   L+  A  +G  +            E GF+
Sbjct: 206 LEKLNAWFA---EHDPDVLIGWNVIQFDLKMLQKHAERYGIPLRLGRNQQELEWREHGFK 262

Query: 361 CDKNQGECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMV---- 416
                 +   +    +D    +K  ++    S  L+AV +  LG      NP D +    
Sbjct: 263 AGVFFAQAPGRLI--IDGIDALK-SAFWNFSSFSLEAVAQELLGEGKAIDNPWDRMAEID 319

Query: 417 -RFAKEKPQMMASYSVSDA-VATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEM 474
            RFA++KP  +A+Y++ D  + T   + T + PF+   A++  +  D     GS      
Sbjct: 320 RRFAEDKP-ALATYNLKDCELVTRIFHKTEIMPFLLERASVNGLPVDR--HGGSVAAFSH 376

Query: 475 LLMVQAYKANVICPNKHQSDPEKFYRNHLLESETYIGGHVECLESGVFRSDLPTSFKLDP 534
           L   + ++A  + PN     P+     ++++S   +   V  L+       +  +F +DP
Sbjct: 377 LYFPRMHRAGFVAPNLGDVPPQASPGGYVMDSRPGLYDSVLVLDYKSLYPSIIRTFLIDP 436

Query: 535 SAYEQLLNNLDRDLQYAIKVEGKMD 559
               + L + D     A  VEG ++
Sbjct: 437 VGLVEGLAHPDN----AHSVEGYLN 457


>gi|298675626|ref|YP_003727376.1| DNA polymerase Pol2 [Methanohalobium evestigatum Z-7303]
 gi|298288614|gb|ADI74580.1| DNA polymerase Pol2 [Methanohalobium evestigatum Z-7303]
          Length = 913

 Score = 54.3 bits (129), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 33/71 (46%), Positives = 39/71 (54%), Gaps = 3/71 (4%)

Query: 750 SEAKASGNSIKIQEAQDMVVLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTG 809
           SE K    SI      D   +YD+ QLA K +LNSFYGY     AR YS+ +A  VT  G
Sbjct: 522 SEVKKKMKSIS---DGDTYRMYDATQLALKILLNSFYGYSGYARARLYSLTLANAVTSYG 578

Query: 810 AKIIQNARLLI 820
            + IQN R LI
Sbjct: 579 RENIQNTRDLI 589


>gi|254569452|ref|XP_002491836.1| Catalytic subunit of the DNA polymerase I alpha-primase complex
            [Komagataella pastoris GS115]
 gi|238031633|emb|CAY69556.1| Catalytic subunit of the DNA polymerase I alpha-primase complex
            [Komagataella pastoris GS115]
 gi|328351664|emb|CCA38063.1| DNA polymerase alpha subunit A [Komagataella pastoris CBS 7435]
          Length = 1442

 Score = 54.3 bits (129), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 77/324 (23%), Positives = 128/324 (39%), Gaps = 65/324 (20%)

Query: 771  YDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIG-KPLEL 829
            +D  Q A K   NS YG +    +R+Y+  +A +VT  G +I+ + R L E +G K +  
Sbjct: 909  FDIKQQALKLTANSMYGCLGYVNSRFYARPLAMLVTSKGREILMDTRQLAESLGLKVVYG 968

Query: 830  DTDGIWCVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKT 889
            DTD +                       TI Y   +   +  +   N++Y  L       
Sbjct: 969  DTDSVMI------------------DSGTIDYQEAIAIGEDLKAKVNERYSLL------- 1003

Query: 890  YETHSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFN---DDGTLA---ELKGFEIK 943
                     E ++D  +K ++L A        KK+YA  N    +G +    E+KG +++
Sbjct: 1004 ---------EIDIDNVFKRILLHA--------KKKYAAMNLSLQNGKMVSQLEVKGLDMR 1046

Query: 944  RRGELKLIKVFQAELFDKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSEL-IDYI 1002
            RR   +L K     + ++ L  +  +E  S +          L+  G  I ++ + I   
Sbjct: 1047 RREYCQLSKEISTHVLEQILGENDSDEALSDI-------YQYLETMGTKIRENSIPITKF 1099

Query: 1003 SESSTMSKSLADYGEQKSCA-VTTARRLSDFLGDTMVKDKGLRCQYIVACEPQGTPVSER 1061
            + ++ +SK  A Y        V  A RL    G   V   G    +IV        V+ER
Sbjct: 1100 NINTKLSKDPAQYANAGGMPQVQVALRLR---GQGKVVKAGTVVSFIVTAGDDNLSVAER 1156

Query: 1062 AVPVAIFETDAEIMK----FYLRK 1081
            A P+A      E ++    +YL K
Sbjct: 1157 ARPLAEVLATPEQLRPDPDYYLEK 1180


>gi|365539441|ref|ZP_09364616.1| DNA polymerase II [Vibrio ordalii ATCC 33509]
          Length = 792

 Score = 54.3 bits (129), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 65/280 (23%), Positives = 113/280 (40%), Gaps = 56/280 (20%)

Query: 777  AHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIG-KPLELDTDGIW 835
            A K I+NSFYG +   G R++   +A  +T  G +I++  + LIE  G + +  DTD  +
Sbjct: 499  AIKIIMNSFYGVLGSSGCRFFDTRLASSITMRGHEIMKQTKKLIEAQGYQVIYGDTDSTF 558

Query: 836  CVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETH-- 893
              L G +       ++    ++ I                      LV+ +++ + TH  
Sbjct: 559  VSLGGQY-------SQQQADRVGIQ---------------------LVEHINQWWTTHLR 590

Query: 894  ----SECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAEL--KGFEIKRRGE 947
                 E  +E E +  Y+  ++P  +      KKRYA    +G    L  KG E  R   
Sbjct: 591  EEYQLESMLELEYETHYRKFLMPTIRGSETGSKKRYAGLIGEGENERLIFKGLESARTDW 650

Query: 948  LKLIKVFQAELFDKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESST 1007
              L + FQ +L+    +G   E+  + +        ++++       D EL+        
Sbjct: 651  TPLAQRFQHQLYSMIFNG---EDPAAFIR-------EIVEQTQTGQLDHELV----YQKR 696

Query: 1008 MSKSLADYGEQKSCAVTTARRLSDFLGDTMVKDKGLRCQY 1047
            + + L +Y +     V  AR     L DT+ +  GL  QY
Sbjct: 697  LRRKLHEYQKNVPPQVRAAR-----LADTINQQLGLPLQY 731


>gi|410634101|ref|ZP_11344740.1| DNA polymerase II [Glaciecola arctica BSs20135]
 gi|410146316|dbj|GAC21607.1| DNA polymerase II [Glaciecola arctica BSs20135]
          Length = 783

 Score = 54.3 bits (129), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 56/243 (23%), Positives = 100/243 (41%), Gaps = 42/243 (17%)

Query: 732 RDRRYEYKGLNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHKCILNSFYGYVMR 791
           RD+ +  + +  +W+ +  EAK + ++ + Q              A K ++NSFYG +  
Sbjct: 460 RDKHFLPEIITSLWQQR-DEAKKNQDAARSQ--------------AIKILMNSFYGVLGS 504

Query: 792 KGARWYSMEMAGVVTYTGAKIIQNARLLIEKIG-KPLELDTDGIWCVLPGSFPENFTFKT 850
            G  +Y   +A  +T  G  I+Q     IE+ G + +  DTD  +  L G   E+   + 
Sbjct: 505 GGCPFYDTRLASSITMRGHDIMQTTAKWIEQAGYQVIYGDTDSTFVWLQG---EHTAPQA 561

Query: 851 KDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHS-ECSIEFEVDGPYKAM 909
             + + L +                N ++Q      +   + H  +C +E E +  +   
Sbjct: 562 DQIGQSLVL--------------EINQKWQ------ANIRQQHQLDCDLEIEFETHFSQF 601

Query: 910 ILPASKEEGILIKKRYAVF--NDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFLHGST 967
           ++P  +   +  KKRYA      DG     KG E  R    +L K FQ  L+     G +
Sbjct: 602 LMPTIRGSELGSKKRYAGLKTTKDGDELVFKGLETVRSDWTQLAKGFQLTLYKMVFAGQS 661

Query: 968 IEE 970
           +E+
Sbjct: 662 VED 664


>gi|116191701|ref|XP_001221663.1| hypothetical protein CHGG_05568 [Chaetomium globosum CBS 148.51]
 gi|88181481|gb|EAQ88949.1| hypothetical protein CHGG_05568 [Chaetomium globosum CBS 148.51]
          Length = 1474

 Score = 54.3 bits (129), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 74/275 (26%), Positives = 113/275 (41%), Gaps = 82/275 (29%)

Query: 707  PVTELREAGICMRENSFYVDTVRSFRDRRYEYKGLNKVWKGKLSEAKASGNSIKIQEAQD 766
            PV E +E GI  +  S  VD       RR + KGL K  KG   E  A+           
Sbjct: 902  PVPEDKELGILPKLISELVD-------RRRQVKGLMKA-KGITPEQLAT----------- 942

Query: 767  MVVLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKP 826
                YD  QLA K   NS YG +    +R+Y+  +A + T+ G +I+++ + L E  G  
Sbjct: 943  ----YDIKQLALKLTANSMYGCLGYTKSRFYARPLAVLTTFKGREILRSTKDLAE--GMS 996

Query: 827  LEL---DTDGIWCVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQ--- 880
            L++   DTD                               VM+N +V  +N  D ++   
Sbjct: 997  LQVIYGDTD------------------------------SVMINANV--DNVADAFKVGR 1024

Query: 881  TLVDPVSKTYETHSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFN---DDGTL--- 934
                 V+K Y+      +E ++D  ++ ++L A        KK+YA  N    DG     
Sbjct: 1025 AFKAEVNKRYK-----RLEIDIDNVFRRILLQA--------KKKYAAMNLVEVDGKFIEE 1071

Query: 935  AELKGFEIKRRGELKLIKVFQAELFDKFLHGSTIE 969
             E+KG ++KRR    L +     + D+ L G  IE
Sbjct: 1072 MEVKGLDMKRREYCPLSRDISKRILDEILSGDDIE 1106


>gi|37679416|ref|NP_934025.1| DNA polymerase II [Vibrio vulnificus YJ016]
 gi|37198159|dbj|BAC93996.1| DNA polymerase elongation subunit [Vibrio vulnificus YJ016]
          Length = 789

 Score = 54.3 bits (129), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 50/191 (26%), Positives = 81/191 (42%), Gaps = 25/191 (13%)

Query: 777 AHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIG-KPLELDTDGIW 835
           A K I+NSFYG +   G R++   +A  +T  G +I++  +LLIE+ G + +  DTD  +
Sbjct: 496 AIKIIMNSFYGVLGSSGCRFFDTRLASSITMRGHEIMKQTKLLIEQQGYQVIYGDTDSTF 555

Query: 836 CVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSE 895
             L G F +          +   I    V L     +++   ++  L   +   YETH  
Sbjct: 556 VSLNGRFEQ---------PEADAIGRQLVSLINQWWKHHLEQEF-NLNSILELEYETH-- 603

Query: 896 CSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAEL--KGFEIKRRGELKLIKV 953
                     Y+  ++P  +      KKRYA     G+   +  KG E  R     L + 
Sbjct: 604 ----------YRKFLMPTIRGAETGSKKRYAGLIQQGSEERIVFKGLESARTDWTPLAQR 653

Query: 954 FQAELFDKFLH 964
           FQ +L+    H
Sbjct: 654 FQHQLYMMIFH 664


>gi|388258890|ref|ZP_10136065.1| DNA polymerase II [Cellvibrio sp. BR]
 gi|387937649|gb|EIK44205.1| DNA polymerase II [Cellvibrio sp. BR]
          Length = 799

 Score = 54.3 bits (129), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 75/308 (24%), Positives = 129/308 (41%), Gaps = 46/308 (14%)

Query: 760  KIQEAQDMVVLYDSLQLAH--KCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNAR 817
            ++  A+D    + +  L+H  K I+NSFYG +   G R++   +   +T  G +IIQ +R
Sbjct: 478  QLSAARDRAKQHKNAPLSHAIKIIMNSFYGVLGSTGCRFFDPRVCSSITLRGHEIIQRSR 537

Query: 818  LLIEKIGKPLEL-DTDGIWCVLPGS---FPENFTFKTKDLKKKLTISYPCVMLNVDVARN 873
              IE+ G  +   DTD ++  L  +   +P     +   + K+L        LN+  A  
Sbjct: 538  DWIEQQGYAVIYGDTDSLFVWLENNCTGYPPKVASQCDLIGKRLAKE-----LNLWWA-- 590

Query: 874  NTNDQYQTLVDPVSKTYETHSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGT 933
                      + +   +  +S   I++E +  Y   ++P  +   +  KKRYA   +   
Sbjct: 591  ----------ETLRTEFNINSALEIQYETN--YLRFLMPTIRGSELGTKKRYAGLIEING 638

Query: 934  LAEL--KGFEIKRRGELKLIKVFQAELFDKFLHGSTIEECYSAVAAVANRWLDLLDNQGK 991
              E+  KG E  R    +L K FQ  L+ K   G   E+ +  V +     L      GK
Sbjct: 639  EREMVFKGLENVRTDWTQLAKEFQMTLYRKVFDG---EDYFDFVRSTTAEVL-----AGK 690

Query: 992  DIADSELIDYISESSTMSKSLADYGEQKSCAVTTARRLSDFLGDTMVKDKGLRCQYIVAC 1051
               D ELI        + + L +Y +     V  AR+ +   G+T+   +G    Y++  
Sbjct: 691  --RDLELI----YRKRLRRHLHEYQKNVPPHVQAARKYAQLTGETL--RRGDWISYVITT 742

Query: 1052 ---EPQGT 1056
               EP G+
Sbjct: 743  NGPEPLGS 750


>gi|393222031|gb|EJD07515.1| hypothetical protein FOMMEDRAFT_164466 [Fomitiporia mediterranea
           MF3/22]
          Length = 1062

 Score = 54.3 bits (129), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 76/321 (23%), Positives = 118/321 (36%), Gaps = 81/321 (25%)

Query: 66  IDLYFVSQDGSTFKSK-YKFRPYFYA-ATKEKMEMDVEA---YLRRRYESQIADIEILEK 120
           I L+ V++DG +  ++ + F PYF+  A +   E D+     YL ++  ++  D   L K
Sbjct: 89  IKLFGVTEDGHSVLARIHGFMPYFFVPAPRGFSEDDLSPFCDYLNKQDNARTVDNVKLAK 148

Query: 121 EDLDLKNHLSGLHKSYLKISFDTVQQLMDVKKDLLHVVERNQAKFDAAE-AYESILTGKR 179
                        KS      D     + +       V R +  FD  E +Y  +  G  
Sbjct: 149 ------------RKSLWGYRGDDWVPFIRITATHPGFVPRIRGLFDNGECSYNGLFNG-- 194

Query: 180 EQRPQDFLDCIVDLREYDVPYHIRFAIDNDVRCGQWYDVSISSTGPL----------LEK 229
                     IV   E ++PY +RF ID  V    W +V       L          LE 
Sbjct: 195 ----------IVTTYESNIPYILRFMIDTKVVGMNWIEVPAGKYQLLSGEKKHSCCQLEF 244

Query: 230 RV---DLLQR---------AEVHVCAFDIETTKLPLKFPDADYDIIMMISYMLDGQGYLI 277
            V   D +           A + + +FDIE       FP+A  D ++ I+ M+  QG   
Sbjct: 245 TVAWNDFISHAPDGEWSKIAPLRILSFDIECAGRKGIFPEAQIDPVIQIANMVTRQG--- 301

Query: 278 INRECVGEDIEDLEYTPKPEFEGYF-----------KVTNVNNEIELLRLWFAHMQEVKP 326
                            KP     F           +V +  +E+E+L  W   +++V P
Sbjct: 302 ---------------ESKPFIRNVFTLNTCSHIVGSQVLSYKSELEMLEAWRDFVEQVDP 346

Query: 327 GIYVTYNGDYFDWPFLETRAA 347
            I + YN   FD P+L  RA 
Sbjct: 347 DIVIGYNIANFDLPYLLDRAT 367


>gi|387893159|ref|YP_006323456.1| DNA polymerase II [Pseudomonas fluorescens A506]
 gi|387164471|gb|AFJ59670.1| DNA polymerase II [Pseudomonas fluorescens A506]
          Length = 785

 Score = 54.3 bits (129), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 57/197 (28%), Positives = 85/197 (43%), Gaps = 30/197 (15%)

Query: 774 LQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIG-KPLELDTD 832
           L  A K I+N+FYG +   G R++   +A  +T  G +I++  R L+E  G + +  DTD
Sbjct: 488 LSQALKIIMNAFYGVLGSSGCRFFDTRLASSITLRGHQIMRQTRALVEAQGYEVIYGDTD 547

Query: 833 GIWCVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYET 892
             +  L GS         +D  +   I    V    D  R + +++Y  L   +   YET
Sbjct: 548 STFVWL-GS-----AHSAQDANR---IGLALVQHVNDWWRAHLSNEY-GLQSALELQYET 597

Query: 893 HSECSIEFEVDGPYKAMILPASK--EEGILIKKRYA---VFNDDGTLAELKGFEIKRRGE 947
           H            +   ++P  +  EEG   KKRYA   V  D G     KG E  R   
Sbjct: 598 H------------FSRFLMPTIRGAEEG--SKKRYAGLVVREDGGEEMVYKGLETVRSDW 643

Query: 948 LKLIKVFQAELFDKFLH 964
             L + FQ EL+ +  H
Sbjct: 644 SPLARQFQQELYQRIFH 660


>gi|195127716|ref|XP_002008314.1| GI13419 [Drosophila mojavensis]
 gi|193919923|gb|EDW18790.1| GI13419 [Drosophila mojavensis]
          Length = 1092

 Score = 54.3 bits (129), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 55/209 (26%), Positives = 81/209 (38%), Gaps = 54/209 (25%)

Query: 185 DFLDCIVDLREYDVPYHIRFAIDNDVRCGQWYDVSIS-------STGPLLEKRVDL---- 233
           DF DC     E ++ + IRF +D  V    W ++          ++ P  E R  L    
Sbjct: 221 DFQDC--RAFENNIDFDIRFMVDTQVVGCNWIELPPGVWRLRGRNSKPAPESRCQLEVDV 278

Query: 234 --------------LQRAEVHVCAFDIETTKLPLKFPDADYDIIMMISYMLDGQG----- 274
                          + A + + +FDIE       FP+A  D ++ I+ M+  QG     
Sbjct: 279 AYDQFISHEPEGEWSKVAPLRILSFDIECAGRKGIFPEAKVDPVIQIANMVIRQGETEPF 338

Query: 275 --YLIINREC---VGEDIEDLEYTPKPEFEGYFKVTNVNNEIELLRLWFAHMQEVKPGIY 329
              +   +EC   +G                  +V     E +LL  W A ++EV P I 
Sbjct: 339 IRNVFTLKECAPIIGS-----------------QVLCFAQETQLLDKWGAFVREVDPDIL 381

Query: 330 VTYNGDYFDWPFLETRAAHHGFKMSEELG 358
             YN + FD P+L  RAAH   K  E LG
Sbjct: 382 TGYNINNFDVPYLLNRAAHLKVKNFEYLG 410


>gi|262275702|ref|ZP_06053511.1| DNA polymerase II [Grimontia hollisae CIP 101886]
 gi|262219510|gb|EEY70826.1| DNA polymerase II [Grimontia hollisae CIP 101886]
          Length = 785

 Score = 54.3 bits (129), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 54/197 (27%), Positives = 85/197 (43%), Gaps = 25/197 (12%)

Query: 777 AHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIG-KPLELDTDGIW 835
           A K I+NSFYG +   G R++   +A  +T  G +I++  R LIE  G + +  DTD  +
Sbjct: 492 AIKIIMNSFYGVLGSSGCRFFDHRLASSITMRGHEIMKTTRELIEAKGHEVIYGDTDSTF 551

Query: 836 CVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSE 895
                S    +T +  D            + N  VA  N        ++ +   Y+  S 
Sbjct: 552 V----SLGRQYTNEEAD-----------EVGNALVAHINA-----WWINHLKTQYDIESA 591

Query: 896 CSIEFEVDGPYKAMILPASKEEGILIKKRYAVFND-DGTLAEL-KGFEIKRRGELKLIKV 953
             IE+E    Y+  ++P  + +    KKRYA   D DG    + KG E  R     L + 
Sbjct: 592 LEIEYETH--YQKFLMPTIRGQDTGSKKRYAGLVDKDGERRIVYKGLETVRTDWTPLAQS 649

Query: 954 FQAELFDKFLHGSTIEE 970
           FQ  L+ K   G  +++
Sbjct: 650 FQQTLYQKVFDGEDVDD 666


>gi|443470432|ref|ZP_21060539.1| DNA polymerase II [Pseudomonas pseudoalcaligenes KF707]
 gi|442900084|gb|ELS26368.1| DNA polymerase II [Pseudomonas pseudoalcaligenes KF707]
          Length = 787

 Score = 54.3 bits (129), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 62/224 (27%), Positives = 95/224 (42%), Gaps = 43/224 (19%)

Query: 741 LNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHKCILNSFYGYVMRKGARWYSME 800
           + KVW+G+   AK  GN               +L  A K I+N+FYG +   G R++   
Sbjct: 472 VEKVWQGR-EAAKREGNK--------------ALSQALKIIMNAFYGVLGSSGCRFFDPR 516

Query: 801 MAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLPGSFPENFTFKTKDLKKKLTIS 860
           +A  +T  G +I++  R LIE  G          + V+ G     F +    LK+     
Sbjct: 517 LASSITLRGHEIMRRTRELIEAEG----------YAVIYGDTDSTFVW----LKRPHAEE 562

Query: 861 YPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEFEVDGPYKAMILPASK--EEG 918
               +    V R N     Q   + +++ Y   S   ++FE    Y+  ++P  +  EEG
Sbjct: 563 DAARIGRALVQRVN-----QWWREHLAREYGLDSALELQFETH--YQRFLMPTIRGAEEG 615

Query: 919 ILIKKRYA--VFNDDGTLAEL-KGFEIKRRGELKLIKVFQAELF 959
              KKRYA  V   DG+   + KG E  R     L + FQ EL+
Sbjct: 616 --SKKRYAGLVVRPDGSREMVYKGLETVRTDWSPLAQRFQQELY 657


>gi|312884544|ref|ZP_07744248.1| DNA polymerase II [Vibrio caribbenthicus ATCC BAA-2122]
 gi|309367856|gb|EFP95404.1| DNA polymerase II [Vibrio caribbenthicus ATCC BAA-2122]
          Length = 785

 Score = 54.3 bits (129), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 55/209 (26%), Positives = 91/209 (43%), Gaps = 33/209 (15%)

Query: 777 AHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIG-KPLELDTDGIW 835
           A K I+NSFYG +   G R++   +A  +T  G ++++  + LIE+ G + +  DTD  +
Sbjct: 492 ALKIIMNSFYGVLGSSGCRFFDTRLASSITMRGHEVMKVTKKLIEEKGYQVIYGDTDSTF 551

Query: 836 CVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSE 895
             L  ++ +    +  ++ ++L +S       VD+A+    + Y  L       YETH  
Sbjct: 552 VALNSAYSDQ---RACEIGEQL-VSEINNWWKVDLAKRFGVESYLEL------EYETH-- 599

Query: 896 CSIEFEVDGPYKAMILPASKEEGILIKKRYA--VFNDDGTLAELKGFEIKRRGELKLIKV 953
                     Y+  ++P  +      KKRYA  V  D       KG E  R     L + 
Sbjct: 600 ----------YQKFLMPTIRGSETGSKKRYAGLVSRDGEKKIIFKGLESARSDWTSLAQD 649

Query: 954 FQAELFDKFLHG--------STIEECYSA 974
           FQ +L+D   +G        S IE  Y+ 
Sbjct: 650 FQYKLYDMVFNGYDPKDYVISVIERTYAG 678


>gi|379004496|ref|YP_005260168.1| DNA polymerase elongation subunit [Pyrobaculum oguniense TE7]
 gi|375159949|gb|AFA39561.1| DNA polymerase elongation subunit (family B) [Pyrobaculum oguniense
           TE7]
          Length = 854

 Score = 54.3 bits (129), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 98/444 (22%), Positives = 181/444 (40%), Gaps = 74/444 (16%)

Query: 133 HKSYLKISFDTVQQLMDVKKDLLHVVERNQAKFDAAEAYES------ILTGKREQRP--- 183
           HK YL I+  T +++++   ++L    +  + F+  E Y++      ++T    + P   
Sbjct: 74  HKPYL-ITNKTPEEIIEKFPEVLR--HKGFSHFEVVEKYDALHDRNVVVTKVYAKDPLSV 130

Query: 184 ----QDFLDCIVDLREYDVPYHIRFAIDNDVRCGQWY----------DVSI-----SSTG 224
                   D + +  E  + YH  +  D  +  G WY          ++SI     SS G
Sbjct: 131 GGGRNSLRDILKETWESRIKYHHSYLFDRGIIPGMWYRSNGNGLAPVEISIPDEVRSSLG 190

Query: 225 PLL--------EKRVDLLQRAEVHV--CAFDIET-TKLPLKFPD---ADYDIIMMISYML 270
            +         E+ + L Q    H+   A D+E  T    K PD   A+Y++I +     
Sbjct: 191 AVFKPEHAKVAEEWIPLFQAPIPHIRRVAIDVEVYTPQENKIPDPKTAEYEVISVALVGS 250

Query: 271 DGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNVNNEIELLRLWFAHMQEVKPGIYV 330
           DG   +++ +    E   +L Y  +P++E  F     ++E +LL   F  +  V+  + +
Sbjct: 251 DGLRRVLVLKRPGAE--PELRY--RPDYEILF----FDSEYDLLMEVFKTI--VQYPLVI 300

Query: 331 TYNGDYFDWPFLETRAAHHGFKMSEELGFQCDKNQGECRAKFACHLDCFAWVKRDSY--- 387
           T+NGD FD P+L  RA   G    EE+     ++          H+D F +    +    
Sbjct: 301 TFNGDNFDLPYLYNRAVALGVP-KEEIPIAARRDY--VGVAPGIHVDMFKFFAIKAIEAY 357

Query: 388 ----LPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQMMASYSVSDAVATYYLYM- 442
               + +G +GL  +  A LG   +E   +++ R    +   +A Y+  DA+ T Y  + 
Sbjct: 358 AFGGVYRGERGLDGIAYAVLGVGKVE-RQKNVSRMGYWE---LAEYNYRDALITLYFTLY 413

Query: 443 --TYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVICPNKHQ--SDPEKF 498
               V   I  L+ I  M  +++ R         +L  +  +   + PNK    S   + 
Sbjct: 414 NNEMVMKLIVLLSRIAKMPIEDITRSQVSAWIRNMLYYEHRRRGWLIPNKEDILSVKGQT 473

Query: 499 YRNHLLESETYIGGHVECLESGVF 522
           +   +++ + Y G  V     G+F
Sbjct: 474 HTKAIIKGKKYAGAVVLDPPLGIF 497


>gi|375131201|ref|YP_004993301.1| DNA polymerase II [Vibrio furnissii NCTC 11218]
 gi|315180375|gb|ADT87289.1| DNA polymerase II [Vibrio furnissii NCTC 11218]
          Length = 787

 Score = 54.3 bits (129), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 48/197 (24%), Positives = 82/197 (41%), Gaps = 35/197 (17%)

Query: 777 AHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWC 836
           A K I+NSFYG +   G R++   +A  +T  G +I++  + LIE  G          + 
Sbjct: 494 AIKIIMNSFYGVLGSSGCRFFDTRLASSITMRGHEIMKQTKQLIEAQG----------YQ 543

Query: 837 VLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSE- 895
           V+ G     F                 V L  + A+++ +   Q+LV  +++ +  H + 
Sbjct: 544 VIYGDTDSTF-----------------VSLGREHAQHDADAIGQSLVQHINQWWTNHLQQ 586

Query: 896 -----CSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAEL--KGFEIKRRGEL 948
                  +E E +  Y+  ++P  +      KKRYA    +G    +  KG E  R    
Sbjct: 587 EYALTSILELEYETHYRKFLMPTIRGAETGSKKRYAGLIGEGDKERMVFKGLESARTDWT 646

Query: 949 KLIKVFQAELFDKFLHG 965
            L + FQ +L+    HG
Sbjct: 647 PLAQRFQHQLYWMIFHG 663


>gi|302349152|ref|YP_003816790.1| DNA polymerase 2 [Acidilobus saccharovorans 345-15]
 gi|302329564|gb|ADL19759.1| DNA polymerase 2 [Acidilobus saccharovorans 345-15]
          Length = 802

 Score = 54.3 bits (129), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 83/364 (22%), Positives = 145/364 (39%), Gaps = 71/364 (19%)

Query: 187 LDCIVDLREYDVPYHIRFAIDNDVRCGQWY----------DVSISSTGPLLEKRVDLLQR 236
           L  + ++ E DV + +R+ ID ++   +WY          D+       L+ +  +    
Sbjct: 114 LPGVAEVLEADVRFSMRYLIDLNLYPMRWYVADAEPVNRSDIIADGAYRLVSRPSEEPSM 173

Query: 237 AEV------HVCAFDIETTKLPLKFPDADYDIIMMISYML-DGQGYLIINRECVGEDIED 289
           A+V       + AFDIE    P   P+   D +++I     DG+    +  E  G     
Sbjct: 174 ADVDPLDGLRIMAFDIEAYN-PQGSPNPSKDPVIIIGVAFNDGER---LQLEAAG----- 224

Query: 290 LEYTPKPEFEGYFKVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHH 349
                             +++ EL++ +   ++   P + V YN + FDWP+L  RA  +
Sbjct: 225 ------------------HSDKELIQKFVDVIRRKDPDVIVGYNQNSFDWPYLLERAKVN 266

Query: 350 GFKMSEELGFQCDKNQGECRAKFACHLDCFAWVKRDSY-LPQGSQGLKAVTKAKLGYDPL 408
           G K+  E+G    K   E       H+     +  D Y   +  + +K  T  ++  D L
Sbjct: 267 GVKL--EVG---RKRGAEPNPSVFGHISVQGRLNVDLYNFAEEIEEVKVKTLDEVA-DYL 320

Query: 409 EVNPEDMV------RFAK-----EKPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIP 457
            V P+D        R A+     EK + + +Y++ D  +T  L   ++ PF   L+ I  
Sbjct: 321 GVMPKDKRVNVDWWRIAEYWDDSEKRKTLLAYNMDDVTSTLGLAYQFL-PFGAQLSQISG 379

Query: 458 MSPDEVLRKGSGTLCEMLLMVQAYKANVICPNKHQSDPEKFYRNHLLESETYIGGHVECL 517
           +  D+V         EM  M +A K   + PN+ + +          E ETY G  V   
Sbjct: 380 LPLDQVAAASVAFRLEMRFMREARKLGELVPNRAEEETR--------ELETYTGAIVLEP 431

Query: 518 ESGV 521
           + G+
Sbjct: 432 KPGI 435



 Score = 43.5 bits (101), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 86/376 (22%), Positives = 145/376 (38%), Gaps = 69/376 (18%)

Query: 707  PVTELREAGICMRENSFYVDTVRSFRDRRYEYKGLNKVWKGKLSEAKASGNSIKIQEAQD 766
            P T L+E   C R N       R   DR   +K + + +    +E KA+    K  E   
Sbjct: 459  PDTLLKEGEACERVNEAPGVRHRFCADRDAFFKRVLERFLKWRAEVKAAMK--KYPEGSP 516

Query: 767  MVVLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIG-K 825
               L +  Q A K + N+ YGY+   GARWY  + A  VT  G  +I  A  L   +G K
Sbjct: 517  QYRLLNERQRAIKVLANASYGYMGWAGARWYCRQCAESVTAWGRDLITRAASLARSLGLK 576

Query: 826  PLELDTDGIWCVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDP 885
                DTD ++                                      N  ++ + +++ 
Sbjct: 577  VYYGDTDSLFV------------------------------------ENDPEKVEKVIEG 600

Query: 886  VSKTYETHSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRR 945
            ++K  E       + ++D  Y  +    +       KKRYA    +G + ++ GFE  R 
Sbjct: 601  ITKGLE------FDIKIDKVYSRVFFTEA-------KKRYAGLTPEGKI-DIVGFEAVRG 646

Query: 946  GELKLIKVFQAELFDKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISES 1005
                L K  QA++ +  L    + +    V  V N      D +   +   +LI +    
Sbjct: 647  DWSDLAKDTQAKVAEIVLRSDDVRKAVDYVRQVIN------DLRNGKVEVEKLIIW---- 696

Query: 1006 STMSKSLADYGEQKSCAVTTARRLSDFLGDTMVKDKGLRCQYIVACEPQGTPVSERAVPV 1065
             T++KS+  Y E ++  V  A+ +   LG  +  D G +  Y++       P+S RA P 
Sbjct: 697  KTLTKSVDKY-EAEAPHVYVAKMMEK-LGFKI--DVGSKIGYVIV--KGDGPLSRRARPY 750

Query: 1066 AIFETDAEIMKFYLRK 1081
             + +     + +Y+ K
Sbjct: 751  FLVKPQDIDVNYYIDK 766


>gi|254481098|ref|ZP_05094344.1| DNA polymerase family B [marine gamma proteobacterium HTCC2148]
 gi|214038893|gb|EEB79554.1| DNA polymerase family B [marine gamma proteobacterium HTCC2148]
          Length = 792

 Score = 54.3 bits (129), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 63/261 (24%), Positives = 104/261 (39%), Gaps = 48/261 (18%)

Query: 727 TVRSFRDRRYEYKG------LNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHKC 780
           TV  F + R+  +G      + ++W+ +  EAK  G++               L  A K 
Sbjct: 463 TVPGFLEARFAREGHILPQLIQQLWQQR-DEAKRVGDA--------------PLSQAIKI 507

Query: 781 ILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIG-KPLELDTDGIWC-VL 838
           I+NSFYG +   G R++   +A  +T  G +I+Q  R  IE+ G + +  DTD ++  + 
Sbjct: 508 IMNSFYGVLGTPGCRFFDARLASSITRRGHQILQRTRDYIEEAGQRVIYGDTDSVFVWIH 567

Query: 839 PGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSI 898
                E      K L++ L   +                      + ++  +   S   +
Sbjct: 568 EAESNEAAVSAGKALERDLNRWWS---------------------EQIANEFALDSALEL 606

Query: 899 EFEVDGPYKAMILPASKEEGILIKKRYA--VFNDDGTLAELKGFEIKRRGELKLIKVFQA 956
           EFE    YK  ++P  +      KKRYA  V    G     KG E  R    +L + FQ 
Sbjct: 607 EFETH--YKRFLMPTIRGSEKGSKKRYAGVVSAASGDQLVFKGLENVRTDWTRLARDFQE 664

Query: 957 ELFDKFLHGSTIEECYSAVAA 977
           EL+ +  +    E+    V A
Sbjct: 665 ELYRRVFYDEPFEDYVKQVTA 685


>gi|145591034|ref|YP_001153036.1| DNA polymerase I [Pyrobaculum arsenaticum DSM 13514]
 gi|145282802|gb|ABP50384.1| replicative DNA polymerase I [Pyrobaculum arsenaticum DSM 13514]
          Length = 853

 Score = 53.9 bits (128), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 98/444 (22%), Positives = 181/444 (40%), Gaps = 74/444 (16%)

Query: 133 HKSYLKISFDTVQQLMDVKKDLLHVVERNQAKFDAAEAYES------ILTGKREQRP--- 183
           HK YL I+  T +++++   ++L    +  + F+  E Y++      ++T    + P   
Sbjct: 73  HKPYL-ITNKTPEEIIEKFPEVLR--HKGFSHFEVVEKYDALHDRNVVVTKVYAKDPLSV 129

Query: 184 ----QDFLDCIVDLREYDVPYHIRFAIDNDVRCGQWY----------DVSI-----SSTG 224
                   D + +  E  + YH  +  D  +  G WY          ++SI     SS G
Sbjct: 130 GGGRNSLRDILKETWESRIKYHHSYLFDRGIIPGMWYKSNGNGLAPVEISIPDEVRSSLG 189

Query: 225 PLL--------EKRVDLLQRAEVHV--CAFDIET-TKLPLKFPD---ADYDIIMMISYML 270
            +         E+ + L Q    H+   A D+E  T    K PD   A+Y++I +     
Sbjct: 190 AVFKPEHAKVAEEWIPLFQAPIPHIRRVAIDVEVYTPQENKIPDPKTAEYEVISVALVGS 249

Query: 271 DGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNVNNEIELLRLWFAHMQEVKPGIYV 330
           DG   +++ +    E   +L Y  +P++E  F     ++E +LL   F  +  V+  + +
Sbjct: 250 DGLRRVLVLKRPGAE--PELRY--RPDYEILF----FDSEYDLLMEVFKTI--VQYPLVI 299

Query: 331 TYNGDYFDWPFLETRAAHHGFKMSEELGFQCDKNQGECRAKFACHLDCFAWVKRDSY--- 387
           T+NGD FD P+L  RA   G    EE+     ++          H+D F +    +    
Sbjct: 300 TFNGDNFDLPYLYNRAVALGVP-KEEIPIAARRDY--VGVAPGIHVDMFKFFAIKAIEAY 356

Query: 388 ----LPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQMMASYSVSDAVATYYLYM- 442
               + +G +GL  +  A LG   +E   +++ R    +   +A Y+  DA+ T Y  + 
Sbjct: 357 AFGGVYRGERGLDGIAYAVLGVGKVE-RQKNVSRMGYWE---LAEYNYRDALITLYFTLY 412

Query: 443 --TYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVICPNKHQ--SDPEKF 498
               V   I  L+ I  M  +++ R         +L  +  +   + PNK    S   + 
Sbjct: 413 NNEMVMKLIVLLSRIAKMPIEDITRSQVSAWIRNMLYYEHRRRGWLIPNKEDILSVKGQT 472

Query: 499 YRNHLLESETYIGGHVECLESGVF 522
           +   +++ + Y G  V     G+F
Sbjct: 473 HTKAIIKGKKYAGAVVLDPPLGIF 496


>gi|238782663|ref|ZP_04626693.1| DNA damage-inducible DNA polymerase II [Yersinia bercovieri ATCC
           43970]
 gi|238716323|gb|EEQ08305.1| DNA damage-inducible DNA polymerase II [Yersinia bercovieri ATCC
           43970]
          Length = 790

 Score = 53.9 bits (128), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 55/222 (24%), Positives = 93/222 (41%), Gaps = 40/222 (18%)

Query: 741 LNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHKCILNSFYGYVMRKGARWYSME 800
           +N++W+G+   AK   N                L  A K I+N+FYG +   G R++   
Sbjct: 476 VNQIWQGR-EAAKRQQNK--------------PLSQALKIIMNAFYGVLGSSGCRFFDPR 520

Query: 801 MAGVVTYTGAKIIQNARLLIEKIG-KPLELDTDGIWCVLPGSFPENFTFKTKDLKKKLTI 859
           +A  +T  G +I++  R LIE  G + +  DTD  +  L  +  E    +   + K+L  
Sbjct: 521 LASSITLRGHEIMRQTRELIEAQGYQVIYGDTDSTFVWLKNAHSEA---QAARIGKELV- 576

Query: 860 SYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEFEVDGPYKAMILPASKEEGI 919
                         + N  +Q   + + +T+     C++E E +  Y+  ++P  +    
Sbjct: 577 -------------QHVNQWWQ---NHIRQTFNL--PCALELEFETHYRRFLMPTIRGAEQ 618

Query: 920 LIKKRYA--VFNDDGTLAELKGFEIKRRGELKLIKVFQAELF 959
             KKRYA  +    G     KG E  R     L + FQ EL+
Sbjct: 619 GSKKRYAGLISTPTGDQMVYKGLETVRTDWTPLAQQFQRELY 660


>gi|27366324|ref|NP_761852.1| DNA polymerase II [Vibrio vulnificus CMCP6]
 gi|27362525|gb|AAO11379.1| DNA polymerase II [Vibrio vulnificus CMCP6]
          Length = 789

 Score = 53.9 bits (128), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 50/199 (25%), Positives = 81/199 (40%), Gaps = 41/199 (20%)

Query: 777 AHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIG-KPLELDTDGIW 835
           A K I+NSFYG +   G R++   +A  +T  G +I++  +LLIE+ G + +  DTD  +
Sbjct: 496 AIKIIMNSFYGVLGSSGCRFFDTRLASSITMRGHEIMKQTKLLIEQQGYQVIYGDTDSTF 555

Query: 836 CVLPGSF--PENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETH 893
             L G F  PE      +                              LV  +++ ++ H
Sbjct: 556 VSLNGRFEQPEADAIGRQ------------------------------LVSLINQWWKQH 585

Query: 894 SE------CSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAEL--KGFEIKRR 945
            E        +E E +  Y+  ++P  +      KKRYA     G+   +  KG E  R 
Sbjct: 586 LEQEFNLNSILELEYETHYRKFLMPTIRGAETGSKKRYAGLIQQGSEERIVFKGLESART 645

Query: 946 GELKLIKVFQAELFDKFLH 964
               L + FQ +L+    H
Sbjct: 646 DWTPLAQRFQHQLYMMIFH 664


>gi|77360914|ref|YP_340489.1| DNA polymerase II [Pseudoalteromonas haloplanktis TAC125]
 gi|76875825|emb|CAI87046.1| DNA polymerase II [Pseudoalteromonas haloplanktis TAC125]
          Length = 806

 Score = 53.9 bits (128), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 53/189 (28%), Positives = 82/189 (43%), Gaps = 25/189 (13%)

Query: 774 LQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIG-KPLELDTD 832
           L  A K I+NS YG +  KG R+Y   ++  +T  G +I+Q  R  IE++G + +  DTD
Sbjct: 514 LSQAIKIIMNSLYGVLGSKGCRFYDPRLSSSITLRGHEIMQTTRKWIEELGYEVIYGDTD 573

Query: 833 GIWCVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYET 892
            I+                 + ++L  +  C  +  DV +   N ++    D +   +  
Sbjct: 574 SIFV---------------KVNERLNAT-QCNEIGNDVMQ-VINKRWS---DSIKTRFSL 613

Query: 893 HSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAEL--KGFEIKRRGELKL 950
            S   IEFE    Y    +P  + + I  KKRY    D     +L  KG E  R    + 
Sbjct: 614 TSYLEIEFETH--YSPFFMPTIRGKKIGSKKRYVGQIDKNNAKQLIFKGMETVRSDWTQF 671

Query: 951 IKVFQAELF 959
            + FQ ELF
Sbjct: 672 AQEFQTELF 680


>gi|113867662|ref|YP_726151.1| DNA polymerase II [Ralstonia eutropha H16]
 gi|113526438|emb|CAJ92783.1| DNA polymerase II [Ralstonia eutropha H16]
          Length = 788

 Score = 53.9 bits (128), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 62/250 (24%), Positives = 106/250 (42%), Gaps = 47/250 (18%)

Query: 725 VDTVRSFRDRRYEYKG------LNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAH 778
            D++  FR  R+          + +VW+G+   AK   N                L  A 
Sbjct: 449 ADSLPGFRGARFSRTKHCLPAIVARVWQGR-EAAKRDRNK--------------PLSQAL 493

Query: 779 KCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIG-KPLELDTDGIWCV 837
           K I+N+FYG +   G R++   +A  +T  G +I++  R LIE  G + +  DTD  +  
Sbjct: 494 KIIMNAFYGVLGSSGCRFFDARLASSITMRGHEIMRQTRALIEARGYEVIYGDTDSTFVW 553

Query: 838 LPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECS 897
           L  +  E      + + + L ++Y              ND ++   D + +TY   S   
Sbjct: 554 LRRARTEA---DARQIGRSL-VAY-------------VNDWWR---DHLWQTYGLESALE 593

Query: 898 IEFEVDGPYKAMILPASKEEGILIKKRYA--VFNDDGTLAEL-KGFEIKRRGELKLIKVF 954
           ++FE    ++  ++P  +   +  KKRYA  V   DG +  + KG E  R     L + F
Sbjct: 594 LQFETH--FRRFLMPTIRGTDLGSKKRYAGQVERPDGKIEMVFKGLETVRTDWSPLAQRF 651

Query: 955 QAELFDKFLH 964
           Q  L++K  +
Sbjct: 652 QQTLYEKIFN 661


>gi|298714506|emb|CBJ27528.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 1097

 Score = 53.9 bits (128), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 119/515 (23%), Positives = 192/515 (37%), Gaps = 106/515 (20%)

Query: 61  KVYSCIDLYFVSQDG-STFKSKYKFRPYFYAATKEKMEMDVEAYLRRRYESQIADIEILE 119
           +V   I LY V+++G S F   + F PYFY       E       R R   Q A I  L 
Sbjct: 118 EVVPVIRLYGVTEEGNSVFTHVHGFVPYFYIPCPPNFED------RHRGALQQAIITALR 171

Query: 120 KEDLDLKNHLSGL---------HKSYLKISFDTVQQLMDV---KKDLLHVVERNQAKFDA 167
                 +N +  L          +S L  SF   +  + +      LL  V+   A    
Sbjct: 172 ARIRGDENRIRSLCLGVGFAKDKQSLLGYSFGNTRDFLQIYLAMPSLLPKVKTLLADGIH 231

Query: 168 AEAYESILTGKREQRPQDFLDCIVDLREYDVPYHIRFAIDNDVRCGQWYDV-----SISS 222
            + Y  +              C     E +VP+ +RF +D ++    W ++     SI S
Sbjct: 232 VDGYGQL--------------CASTSYESNVPFVLRFMVDKEIPGASWIELPKGTYSIRS 277

Query: 223 TGPLLEKR------VDLL--------------QRAEVHVCAFDIETTKLPLKFPDADYDI 262
                +KR      VD+               + A + + +FDIE       FP+AD D 
Sbjct: 278 D---YKKRSRCQLEVDVFFNHMKSHPCKGEWNKVAPLRILSFDIECAGRKGHFPEADKDP 334

Query: 263 IMMISYMLDGQGYLIINRECVGEDIEDLEY-TPKPEFEGYFKVTNVNNEIELLRLWFAHM 321
           ++ I+ ++  QG    + + V +++  L   TP     G   ++N   E ELL  W   +
Sbjct: 335 VIQIANVVKVQG----SDDVVAKNVFTLGGCTP---IVGAHVISNA-TEDELLWEWSQFV 386

Query: 322 QEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDKNQGECRAKFACHLDCF-- 379
           +   P I   YN   FD P+L  RA     K  +   F      G  R K A   D    
Sbjct: 387 KVADPDILTGYNIQNFDVPYLLNRAKALSRKSKKLEKF---GEWGRLRGKMATMKDTTFQ 443

Query: 380 --AWVKRDS------------YLPQ-------GSQGLKAVTKAKLGYDPLEVN---PEDM 415
             A+ KR++             LP         S  L +V+   LG    +V+     D+
Sbjct: 444 SSAYGKRENVETSIDGRVMFDMLPYMFRNHKLSSYSLNSVSAELLGQQKEDVHYSIISDL 503

Query: 416 VRFAKEKPQMMASYSVSDAVATYYLY---MTYVHPFIFSLATIIPMSPDEVLRKGSGTLC 472
              + E  + +A Y + DA+    L       V+    +  T +P+  + +L +G     
Sbjct: 504 QNGSDEDRRRLAVYCIKDALLPMKLMEKLSVMVNYIEMARVTGVPL--NFLLSRGQQIKV 561

Query: 473 EMLLMVQAYKANVICPN--KHQSDPEKFYRNHLLE 505
             +L+ +    N++ PN  KH  D E +    ++E
Sbjct: 562 FSMLLRKTRSVNLLIPNLPKHAVDQETYEGATVIE 596


>gi|238755743|ref|ZP_04617076.1| DNA polymerase II [Yersinia ruckeri ATCC 29473]
 gi|238706035|gb|EEP98419.1| DNA polymerase II [Yersinia ruckeri ATCC 29473]
          Length = 744

 Score = 53.9 bits (128), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 55/231 (23%), Positives = 91/231 (39%), Gaps = 50/231 (21%)

Query: 741 LNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHKCILNSFYGYVMRKGARWYSME 800
           +N++W+G+  EAK   N                L  A K I+N+FYG +   G R++   
Sbjct: 430 VNQIWQGR-EEAKRQQNK--------------PLSQALKIIMNAFYGVLGSSGCRFFDPR 474

Query: 801 MAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLPGSFPENFTFKTKDLKKKLTIS 860
           +A  +T  G +I++  R LIE  G          + V+ G     F              
Sbjct: 475 LASSITLRGHEIMRQTRELIETRG----------YQVIYGDTDSTF-------------- 510

Query: 861 YPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSE------CSIEFEVDGPYKAMILPAS 914
              V L    +    +   + LV+ V+  ++ H +      C++E E +  Y+  ++P  
Sbjct: 511 ---VWLKHAHSDEQASQIGKALVEYVNNWWQQHLQDTFGLPCALELEFETHYRRFLMPTI 567

Query: 915 KEEGILIKKRYA--VFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFL 963
           +      KKRYA  V   +G     KG E  R     L + FQ  L+ +  
Sbjct: 568 RGAEQGSKKRYAGLVTTPEGDRMIYKGLETVRTDWTPLAQEFQQALYQRIF 618


>gi|324120762|dbj|BAJ78772.1| DNA polymerase delta catalytic subunit [Papilio polytes]
          Length = 1082

 Score = 53.9 bits (128), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 71/311 (22%), Positives = 126/311 (40%), Gaps = 53/311 (17%)

Query: 68  LYFVSQDGSTFKSK-YKFRPYFYAATKEKMEMDVEAYLRRRYESQIADIEI-LEKEDL-D 124
           +Y V+ +G++     + F PYFY                   +S   D++I L K  L D
Sbjct: 106 MYGVTMEGNSVCCHVHGFTPYFYVTVPSNFT-----------DSMCNDMKINLNKVILED 154

Query: 125 LKNHLSGLHKSYLKISFDTVQQLMDVKKDLLHVVERNQAKFDAAEAYESILTGKR--EQR 182
           L+++   + ++ L++     + +M  K D    V+   A+   A     I   KR  +++
Sbjct: 155 LRSNKDNIRETVLEVRLMQARSIMYYKGD----VDIRFARVSVALP-RLIAAAKRLIDKQ 209

Query: 183 PQDFLDCIVDLREYDVPYHIRFAIDNDVRCGQWYDVSI---------SSTGPLLEKRVDL 233
           P  F        E ++ + IRF +D +V    W ++ +         S   P    ++++
Sbjct: 210 PPSFGLLDPSFYETNIDFDIRFMVDTNVVGCSWIELPVGKWLIRSKDSKVKPESRCQIEV 269

Query: 234 ----------------LQRAEVHVCAFDIETTKLPLKFPDADYDIIMMISYMLDGQGYLI 277
                            + A   + +FDIE       FP+ ++D ++ I+ M+  QG   
Sbjct: 270 DVAWNNFIAHQPEGEWSKVAPFRILSFDIECAGRKGIFPEPNHDPVIQIASMVVRQG--- 326

Query: 278 INRECVGEDIEDLEYTPKPEFEGYFKVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYF 337
              E    ++  L  T  P      +V +  +E E+L  W    +E+ P I   YN   F
Sbjct: 327 -ETEPYLRNVFTLN-TCAPIVGS--QVLSFQSESEMLARWADFFRELDPDIITGYNISNF 382

Query: 338 DWPFLETRAAH 348
           DWP+L  RA H
Sbjct: 383 DWPYLINRAKH 393


>gi|334704844|ref|ZP_08520710.1| DNA polymerase II [Aeromonas caviae Ae398]
          Length = 800

 Score = 53.9 bits (128), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 50/194 (25%), Positives = 78/194 (40%), Gaps = 23/194 (11%)

Query: 773 SLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTD 832
           +L  A K I+NSFYG +   G R+Y   +A  +T  G  I+Q  R  IE  G        
Sbjct: 503 ALSQAIKIIMNSFYGVLGSGGCRFYDPRLASSITLRGHGIMQQTREWIEAEG-------- 554

Query: 833 GIWCVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYET 892
             + V+ G     F     D++ +        +  +       ND +  L   + + ++ 
Sbjct: 555 --FEVIYGDTDSTFVHLGSDIRLEQADEIGQRLAKM------INDNWAAL---IRREFDL 603

Query: 893 HSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAEL--KGFEIKRRGELKL 950
            S   I++E    Y+  ++P  +      KKRYA    +G    L  KG E  R     L
Sbjct: 604 PSHLEIQYETH--YRRFLMPTIRGLEKGSKKRYAGLVGEGEGEHLVFKGLETVRTDWTPL 661

Query: 951 IKVFQAELFDKFLH 964
            K FQ  L++   H
Sbjct: 662 AKAFQTRLYEMVFH 675


>gi|328857126|gb|EGG06244.1| hypothetical protein MELLADRAFT_48531 [Melampsora larici-populina
            98AG31]
          Length = 1159

 Score = 53.9 bits (128), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 68/266 (25%), Positives = 111/266 (41%), Gaps = 69/266 (25%)

Query: 768  VVLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPL 827
            ++ Y+  QLA K   NS YG +  +G+R+Y+  +A + TY G +I+ N R L E   K L
Sbjct: 628  MIQYEIKQLALKLTANSMYGCLGFEGSRFYARSLAALTTYKGREILTNTRELAE--SKDL 685

Query: 828  EL---DTDGIWCVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVD----VARNNTNDQYQ 880
            ++   DTD                               VM+N +     A      +++
Sbjct: 686  DVIYGDTDS------------------------------VMINTNAIDFAAAKKIGGEFK 715

Query: 881  TLVDPVSKTYETHSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFN-DDGTL---AE 936
             LV+   +         +E ++D  ++ M+L        L KK+YA    D+ TL    E
Sbjct: 716  KLVNERYRL--------LEIDIDAVFERMLL--------LQKKKYAALKIDEVTLQKSVE 759

Query: 937  LKGFEIKRRGELKLIKVFQAELFDKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADS 996
            +KG ++KRR   KL K     +    L G   E        V  +  + L   G+D+ + 
Sbjct: 760  VKGLDMKRREFCKLSKDASQYILQHVLSGDPTE-------IVVEKMHEYLTQLGEDVKEG 812

Query: 997  --ELIDYISESSTMSKSLADYGEQKS 1020
              +L D+I     + K+  DY + KS
Sbjct: 813  RKDLEDFIIHKK-LGKNPKDYPDAKS 837


>gi|389680833|ref|ZP_10172182.1| DNA polymerase II [Pseudomonas chlororaphis O6]
 gi|388555420|gb|EIM18664.1| DNA polymerase II [Pseudomonas chlororaphis O6]
          Length = 786

 Score = 53.9 bits (128), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 57/203 (28%), Positives = 85/203 (41%), Gaps = 42/203 (20%)

Query: 774 LQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIG-KPLELDTD 832
           L  A K I+N+FYG +   G R++   +A  +T  G +I++  R LIE  G K +  DTD
Sbjct: 489 LSQALKIIMNAFYGVLGSSGCRFFDPRLASSITMRGHEIMRRTRQLIEAQGHKVIYGDTD 548

Query: 833 GIWCVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYET 892
             +  L  +  E                        D AR       + LV  V++ +  
Sbjct: 549 STFVWLGSAHAE-----------------------ADAARIG-----RALVQHVNQWWRD 580

Query: 893 H------SECSIEFEVDGPYKAMILPA--SKEEGILIKKRYA--VFNDDGTLAEL-KGFE 941
           H       E ++E + +  +   ++P     EEG   KKRYA  V   DGT   + KG E
Sbjct: 581 HLRDEYGLESALELQFETHFSRFLMPTIRGAEEG--SKKRYAGLVTRADGTQEMVYKGLE 638

Query: 942 IKRRGELKLIKVFQAELFDKFLH 964
             R     L + FQ EL+ +  H
Sbjct: 639 AVRTDWSPLAQQFQQELYQRIFH 661


>gi|389582644|dbj|GAB65381.1| DNA polymerase delta catalytic subunit [Plasmodium cynomolgi strain
           B]
          Length = 1159

 Score = 53.9 bits (128), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 120/591 (20%), Positives = 215/591 (36%), Gaps = 130/591 (21%)

Query: 66  IDLYFVSQDG-STFKSKYKFRPYFYAATKEKMEMDVEAYLRRRYESQIADIEILEKEDLD 124
           I +Y V+ DG S   + + F PYFY         D E  L+         +E +  ++L+
Sbjct: 184 IRIYTVTNDGYSVLVNVHNFFPYFYVEMPS--HFDKEDLLK---------LECMMNDNLN 232

Query: 125 LKNHLSGLHKSYLKISFDTVQQLM----DVKKDLLHVVERNQAKFDAAEAYESILTGKRE 180
             +      K  L I     + LM    D KKD L +               ++L  K  
Sbjct: 233 ANSQYKIYDKKILNIEIVKTESLMYYKRDGKKDFLKI---------------TVLLPKMV 277

Query: 181 QRPQDFLDCIVDLR---------EYDVPYHIRFAIDNDVRCGQWY--------------- 216
              + F + +V++          E ++P+ +R+ ID  +    W                
Sbjct: 278 PSLKKFFESVVNVNGKSIGGIVYEANLPFILRYIIDKKITGSSWLLCKNNHFHIRPKHKK 337

Query: 217 --------DVSISSTGPL-LEKRVDLLQRAEVHVCAFDIETTKLPLK-FPDADYDIIMMI 266
                   D+S     P+ LE      Q  ++ + +FDIE  KL  K FP+A  D I+ I
Sbjct: 338 ISNCSFEIDISYEHIEPMPLENEYQ--QIPKIRIVSFDIECIKLDGKGFPEAKNDPIIQI 395

Query: 267 SYMLDGQG--------YLIINRECVGEDIEDLEYTPKPEFEGYFKVTNVNNEIELLRLWF 318
           S +L  QG        ++   +EC      ++ +               ++E  LL  W 
Sbjct: 396 SSILYFQGDPIGKCSKFIFTLKECASIPGSNVIW--------------FSDEKTLLDAWS 441

Query: 319 AHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELG-----FQCDKNQGECRAKFA 373
             +  + P     YN   FD P++  R      K  + LG         K       +F 
Sbjct: 442 EFITRLDPDFLTGYNIINFDLPYILNRGTALNLKKLKMLGRIKNISSVVKESSFSSKQFG 501

Query: 374 CH------------LDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPED-----MV 416
            H             D +  +KRD         LK+ T   + ++ L+   ED     M 
Sbjct: 502 THETKEININGRIQFDVYDLIKRD-------YKLKSYTLNYVSFEFLKEQKEDVHYSIMN 554

Query: 417 RFAKEKPQM---MASYSVSDAVATYYLY--MTYVHPFIFSLATIIPMSPDEVLRKGSGTL 471
               E P+    +A+Y + D +    L   + +++ ++  +A +       +L +G    
Sbjct: 555 DLQNESPESRKRIATYCIKDGILPLRLIDKLLFIYNYV-EMARVTGTPFVYLLTRGQQIK 613

Query: 472 CEMLLMVQAYKANVICPNKH--QSDPEKFYRNHLLESETYIGGHVECLESGVFRSDLPTS 529
               L  +  + N + P+ +      EK+    +LE     G ++E + +  F S  P+ 
Sbjct: 614 VTSQLYRKCKELNYVIPSTYIKSGSNEKYEGATVLEPIK--GYYIEPISTLDFASLYPSI 671

Query: 530 FKLDPSAYEQLLNNLDRDLQYAIKVEGKMDLESVSNYDEVKNAIMEKLLRL 580
                  Y  L+ N + +++  +K E    ++   N   VK ++ + +L L
Sbjct: 672 MIAHNLCYSTLVKN-NSEIE-GLKQEEVTSIQGKGNIKFVKRSVKKGILPL 720


>gi|260772983|ref|ZP_05881899.1| DNA polymerase II [Vibrio metschnikovii CIP 69.14]
 gi|260612122|gb|EEX37325.1| DNA polymerase II [Vibrio metschnikovii CIP 69.14]
          Length = 787

 Score = 53.5 bits (127), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 48/191 (25%), Positives = 79/191 (41%), Gaps = 25/191 (13%)

Query: 777 AHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIG-KPLELDTDGIW 835
           A K I+NSFYG +   G R++   +A  +T  G +I++  + LIE  G + +  DTD  +
Sbjct: 494 AIKIIMNSFYGVLGSSGCRFFDTRLASSITMRGHEIMKQTKTLIEAQGYQVIYGDTDSTF 553

Query: 836 CVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSE 895
             L G+F +    K                    + R+      Q     + + Y   S 
Sbjct: 554 VSLGGAFIQTQADK--------------------IGRDLVWHINQWWATHLQQAYGLSSF 593

Query: 896 CSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAEL--KGFEIKRRGELKLIKV 953
             +E+E    Y+  ++P  +      KKRYA    +    ++  KG E  R     L + 
Sbjct: 594 LELEYETH--YRKFLMPTIRGSETGSKKRYAGLIGEPGAEKMVFKGLESARSDWTPLAQR 651

Query: 954 FQAELFDKFLH 964
           FQ+EL+    H
Sbjct: 652 FQSELYWMIFH 662



 Score = 45.4 bits (106), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 55/241 (22%), Positives = 96/241 (39%), Gaps = 17/241 (7%)

Query: 307 VNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCD---- 362
           V +E  LL       Q   P + + +N   FD+  L  RA  H  K+      Q      
Sbjct: 199 VADEYHLLSALVDWFQRYDPDVIIGWNVIDFDFRLLHKRAEWHQLKLKLGRAKQASYFRS 258

Query: 363 ---KNQGECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVR-- 417
               NQG         LD    +K  +Y  + S  L+AV++  LG       P D +   
Sbjct: 259 AAQTNQGFITIPGRVVLDGIDTLKTATYQFR-SWSLEAVSRQLLGEGKAITQPHDRMEEI 317

Query: 418 ---FAKEKPQMMASYSVSDAVATYYLYM-TYVHPFIFSLATIIPMSPDEVLRKGSGTLCE 473
              + ++KPQ+ A Y++ D +    ++  T++  F+   + +  +  D +   GS     
Sbjct: 318 NRLYRQDKPQL-AHYNLQDCILVEKIFQHTHLLDFVIQRSRLTGLELDRI--GGSVAAFT 374

Query: 474 MLLMVQAYKANVICPNKHQSDPEKFYRNHLLESETYIGGHVECLESGVFRSDLPTSFKLD 533
            L + Q ++A  I PN H  +       ++++S   +   V  L+       +  SF +D
Sbjct: 375 NLYLPQLHRAGYIAPNLHSENWMASPGGYVMDSRPGLYDSVLLLDFKSLYPSIIRSFLID 434

Query: 534 P 534
           P
Sbjct: 435 P 435


>gi|146308587|ref|YP_001189052.1| DNA polymerase II [Pseudomonas mendocina ymp]
 gi|145576788|gb|ABP86320.1| DNA damage-inducible DNA polymerase II [Pseudomonas mendocina ymp]
          Length = 786

 Score = 53.5 bits (127), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 67/251 (26%), Positives = 99/251 (39%), Gaps = 51/251 (20%)

Query: 727 TVRSFRDRRYEYKG------LNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHKC 780
           +V  FR  R+          + +VW+G+   AK  GN+              +L  A K 
Sbjct: 451 SVEGFRGARFSRSRHCLPAIVERVWQGR-EAAKRDGNA--------------ALSQALKI 495

Query: 781 ILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKP-LELDTDGIWCVLP 839
           I+N+FYG +   G R++   +A  +T  G +I++  R LIE  G   +  DTD  +  L 
Sbjct: 496 IMNAFYGVLGSSGCRFFDPRLASSITLRGHQIMRRTRELIEAEGHAVIYGDTDSTFVWLG 555

Query: 840 GSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIE 899
                    +  D  +   I    V       R +  D+Y  L   +   +ETH      
Sbjct: 556 ---------RAHDEAEAAQIGRALVARVNAWWREHLADEY-GLTSALELQFETH------ 599

Query: 900 FEVDGPYKAMILPA--SKEEGILIKKRYA--VFNDDGT-LAELKGFEIKRRGELKLIKVF 954
                 Y+  ++P     EEG   KKRYA  V   DG+     KG E  R     L + F
Sbjct: 600 ------YRRFLMPTIRGTEEG--SKKRYAGLVRAADGSERMVFKGLETVRSDWSPLAQRF 651

Query: 955 QAELFDKFLHG 965
           Q EL+     G
Sbjct: 652 QQELYRLVFAG 662


>gi|325193152|emb|CCA27509.1| predicted protein putative [Albugo laibachii Nc14]
          Length = 1084

 Score = 53.5 bits (127), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 109/498 (21%), Positives = 181/498 (36%), Gaps = 84/498 (16%)

Query: 48  TFASSSLEDEDTRKVYSCIDLYFVSQDG-STFKSKYKFRPYFYAATKEKMEMDVEAYLRR 106
           T   S +  E + +++  I +Y V+  G S     + F PYFYAA  E  + +    +R+
Sbjct: 85  TETGSKVYAEKSNQLFPVIRVYGVNATGNSVVLHVHGFMPYFYAACPENFDYEKCGQVRQ 144

Query: 107 RYESQIADIEILEKEDLDLKNHLSGLH-----KSYLKISFDTVQQLMDVKKDLLHVVERN 161
                 A  + LE         + GL      KS     FD    +  V   +   V + 
Sbjct: 145 ------ALNKTLESTMKSGPPPIIGLEVVRNLKSIYGFQFDFSMTVWKVYVSMPAFVPKV 198

Query: 162 QAKFDAAEAYESILTGKREQRPQDFLDCIVDLREYDVPYHIRFAIDNDVRCGQWYDV--- 218
           ++  +   +    L G R  +            E +VP+ +RF ID ++    W      
Sbjct: 199 RSLLENGIS----LPGFRSYQ----------TYESNVPFLLRFMIDKEIHGCNWLQAPKG 244

Query: 219 --SISSTG---PLLEKRVDLL--------------QRAEVHVCAFDIETTKLPLKFPDAD 259
             SI S        +  +D+               + A   V +FDIE       FP+A+
Sbjct: 245 MYSIRSANDKQSSCQLELDIACTDLKSHSPTGQWSKLAPFRVLSFDIECMGRKGHFPEAE 304

Query: 260 YDIIMMISYMLDGQG---YLIINRECVGEDIEDLEYTPKPEFEGYFKVTNVNNEIELLRL 316
           +D I+ I+ ++  QG    L  N   +G        T KP       V     E ++L  
Sbjct: 305 HDPIIQIANIVQEQGSPALLFRNVFVLG--------TCKPIVGT--SVMEFVREEDMLER 354

Query: 317 WFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDKNQGECRAKFA--- 373
           W A ++   P I   YN D FD P++  R         ++LG    K+    +  F+   
Sbjct: 355 WAAFVRLADPDIITGYNVDNFDIPYILNRGKSLKLSEFDQLGRLLSKSAFMEKKTFSSAQ 414

Query: 374 --------------CHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVN---PEDMV 416
                         C  D +  ++R   L   S  L AV+ A LG    +V      D+ 
Sbjct: 415 YGKSESIKTTIHGRCTFDLYPIMRRSFQL--SSYSLNAVSSAFLGQQKEDVPYGIISDLQ 472

Query: 417 RFAKEKPQMMASYSVSDAVATYYLYMTYVHPFIF-SLATIIPMSPDEVLRKGSGTLCEML 475
           R   +    +A Y + DA     L         +  +A +  +  D +L +G       +
Sbjct: 473 RGTDDDRHRLAVYCLKDASLPLQLLHNLSLLVNYIEMARVCGVPIDYLLERGQQIKVYSM 532

Query: 476 LMVQAYKANVICPNKHQS 493
           L+ +   AN++ P   +S
Sbjct: 533 LLRKCKGANLLVPTLQRS 550


>gi|157962476|ref|YP_001502510.1| DNA polymerase II [Shewanella pealeana ATCC 700345]
 gi|157847476|gb|ABV87975.1| DNA polymerase B region [Shewanella pealeana ATCC 700345]
          Length = 799

 Score = 53.5 bits (127), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 70/289 (24%), Positives = 115/289 (39%), Gaps = 47/289 (16%)

Query: 774  LQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIG-KPLELDTD 832
            L  A K I+NS YG +  +G  ++   +A  +T  G +I++  RL IE  G K +  DTD
Sbjct: 505  LSQAIKIIMNSLYGVLGSRGCVFHDARLASSITMRGHEIMKQTRLWIEAEGYKVIYGDTD 564

Query: 833  GIWCVLPGSFPENFTFKT-KDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYE 891
              +  L   F +    +T K L +K+                      Q   D +++ ++
Sbjct: 565  STFVWLGNDFEQEQVAQTGKSLAEKVN---------------------QLWRDKLTQEFK 603

Query: 892  THSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAEL----KGFEIKRRGE 947
              S   +EFE    ++   +P  +      KKRY V     T  EL    KG E  R   
Sbjct: 604  LESFLELEFETH--FEQFFMPTLRGSVEGSKKRY-VGTKRQTSGELGLVFKGMEQVRSDW 660

Query: 948  LKLIKVFQAELFDKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESST 1007
              L +  Q EL+++                V     +++D+      D ELI     +  
Sbjct: 661  SPLARRVQYELYERLFQH----------LDVTTYLREIIDSLHSGELDDELI----FTKH 706

Query: 1008 MSKSLADYGEQKSCAVTTARRLSDFLGDTMVKDKGLRCQYIV---ACEP 1053
            + ++L DY  + +  +  AR L D   D     +G R +Y++     EP
Sbjct: 707  LRRNLEDYTAKSAPHLKVARALCDINQDQRFAKRGARIEYVMTLNGAEP 755


>gi|47179455|emb|CAG13526.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 114

 Score = 53.5 bits (127), Expect = 0.001,   Method: Composition-based stats.
 Identities = 36/105 (34%), Positives = 53/105 (50%), Gaps = 11/105 (10%)

Query: 1482 GAYRKVSVELKIHHLSVNALLKSNQVNEMEGGGLFG--FD-------QDMNSGPYN-NEL 1531
            G Y    VEL +  L+VN +L+S  VN+MEGG   G  FD       ++M SG    + +
Sbjct: 10   GCYSTACVELDLQSLAVNTILQSQHVNDMEGGASLGVSFDVIQQASLEEMMSGNQGASAV 69

Query: 1532 CGFDETTSSAPAFRVVKQLIQRCLTDAVTS-GNVFADAILQHLYR 1575
              +DET   +  FR++K+         +T   NV+AD  + H YR
Sbjct: 70   ASYDETALCSNTFRILKKHGGWSGVREITQFHNVYADNQVMHFYR 114


>gi|355571109|ref|ZP_09042379.1| DNA polymerase B region [Methanolinea tarda NOBI-1]
 gi|354826391|gb|EHF10607.1| DNA polymerase B region [Methanolinea tarda NOBI-1]
          Length = 823

 Score = 53.5 bits (127), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 74/291 (25%), Positives = 114/291 (39%), Gaps = 50/291 (17%)

Query: 751  EAKASGNSIKIQEAQDMVVLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGA 810
            E KA  N   I   +  V  YD  Q   K I+N++YG       R Y  E+   VT  G 
Sbjct: 494  EKKAMRNRYPIGSPEYTV--YDMQQNVIKVIMNTYYGVSGYARFRLYDREIGAAVTSVGR 551

Query: 811  KIIQNARLLIEKIG-KPLELDTDGIWCVLPG-SFPENFTFKTKDLKKKLTISYPCVMLNV 868
             II++ R +IE +G + +  DTD     LPG   P     +++ ++  L  SY       
Sbjct: 552  AIIEHTRRVIEGLGYRVIYGDTDSCMVELPGLDLPATIA-ESRRIEAVLNASYG------ 604

Query: 869  DVARNNTNDQYQTLVDPVSKTYETHSECSIEFEVDGPYKAMILPASKEEGILIKKRYA-- 926
            + A+   N           K Y    +                          KKRYA  
Sbjct: 605  EFAKRELNADVHYFSIKFEKVYRRFFQAG-----------------------RKKRYAGH 641

Query: 927  VFNDDGTLA---ELKGFEIKRRGELKLIKVFQAELFDKFLHGSTIEECYSAVAAVANRWL 983
            +   +G++    ++ GFEI+R    ++ KV QA + +  L G    E Y AV     ++L
Sbjct: 642  LVWKEGSIVDGIDIVGFEIRRSDYPQITKVVQARVIELILRG----EGYDAV----RKYL 693

Query: 984  DLLDNQGKDIADSELIDYISESSTMSKSLADYGEQKSCAVTTARRLSDFLG 1034
              +    +  A    +D I     + K L +Y +     V  AR  +D+LG
Sbjct: 694  GEVIKNFR--AGKFPLDEIGIPGGIGKELGEY-QNDDAHVRGARYANDYLG 741


>gi|340380252|ref|XP_003388637.1| PREDICTED: DNA polymerase delta catalytic subunit-like, partial
           [Amphimedon queenslandica]
          Length = 777

 Score = 53.5 bits (127), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 89/418 (21%), Positives = 152/418 (36%), Gaps = 92/418 (22%)

Query: 195 EYDVPYHIRFAIDNDVRCGQWYDVSISS-----------TGPLLEKRVDL---------- 233
           E ++ Y +RF ID DV    W +V               T P    +++L          
Sbjct: 221 ESNIEYEVRFMIDTDVVGCNWIEVPPGKYSLRKFGPPGVTTPTTRCQIELDVSCDDFISH 280

Query: 234 ------LQRAEVHVCAFDIETTKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDI 287
                  + A + + +FDIE       FP+AD D ++ I+ M+  QG             
Sbjct: 281 TPEGEWQKIAPLRILSFDIECAGRKGVFPEADVDPVIQIANMIQVQG------------- 327

Query: 288 EDLEYTPKPEFEGYFK-----------VTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDY 336
                 P P     F            V +  NE +LL+ W   +QE  P I   YN   
Sbjct: 328 -----DPAPFIRNVFTLGSCSGIVGSDVRSFANEKDLLQSWCEFLQETDPDILTGYNIVN 382

Query: 337 FDWPFLETRAAHHGFKMSEELGFQCDKNQGECRAKFACHLDCFAWVKRDSYLPQGS---- 392
           FD P+L  RA     +    LG    +             +  A+ KR++ L   S    
Sbjct: 383 FDLPYLINRAKALKLQQFPYLG----RTTSAMTVIKTSTFESKAYGKRENKLINISGRVQ 438

Query: 393 ----------QGLKAVTKAKLGYDPLEVNPE--------DMVRFAKEKPQMMASYSVSDA 434
                       L++ +   + Y  L+   E        D+    ++  + +A Y + DA
Sbjct: 439 FDLLQVLFRDTKLRSYSLNSVSYHFLKEQKEDVPHNIITDLQNGNEDSRRRLAVYCMKDA 498

Query: 435 VATYYL---YMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVICPNKH 491
           +    L    M+ ++    +  T +P+  + +L +G        L+ +A K +++ P   
Sbjct: 499 ILPLRLLEKLMSLINYIEMARVTGVPL--NYLLTRGQQIKVVSQLLRKAKKHDLLMPVIK 556

Query: 492 QSDPEKFYRNHLLESE-TYIGGHVECLESGVFRSDLPTSFKLDPSAYEQL-LNNLDRD 547
               E++   H++E +  Y    +  L+   F S  P+  +     Y  L L N+DRD
Sbjct: 557 SESQEEYLGGHVIEPQRGYYSSPISVLD---FSSLYPSIMQAHNLCYTTLILRNVDRD 611


>gi|119473301|ref|ZP_01614940.1| DNA polymerase II [Alteromonadales bacterium TW-7]
 gi|119444504|gb|EAW25825.1| DNA polymerase II [Alteromonadales bacterium TW-7]
          Length = 297

 Score = 53.5 bits (127), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 48/187 (25%), Positives = 81/187 (43%), Gaps = 25/187 (13%)

Query: 777 AHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLEL-DTDGIW 835
           A K I+NS YG +  KG R+Y   ++  +T  G +I+Q  R  +E++G  +   DTD I+
Sbjct: 3   AIKIIMNSLYGVLGSKGCRFYDPRLSSSITLRGHEIMQTTRKWMEELGYSVIYGDTDSIF 62

Query: 836 CVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSE 895
                            +K   +++  C     +    + N Q++     ++K +   S 
Sbjct: 63  -----------------VKVDESLTAQCCNKIGNELMTHINHQWER---HIAKDFNLKSY 102

Query: 896 CSIEFEVDGPYKAMILPASKEEGILIKKRYA--VFNDDGTLAELKGFEIKRRGELKLIKV 953
             IEFE    Y    +P  +++    KKRY   +   D +    KG E  R    +  + 
Sbjct: 103 LEIEFETH--YSPFFMPTIRDKKTGSKKRYVGKIVKGDESKIVFKGMETVRSDWTEFAQE 160

Query: 954 FQAELFD 960
           FQ ELF+
Sbjct: 161 FQKELFE 167


>gi|422834354|ref|ZP_16882416.1| DNA polymerase II [Escherichia coli E101]
 gi|371601874|gb|EHN90593.1| DNA polymerase II [Escherichia coli E101]
          Length = 783

 Score = 53.5 bits (127), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 59/233 (25%), Positives = 90/233 (38%), Gaps = 41/233 (17%)

Query: 741 LNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHKCILNSFYGYVMRKGARWYSME 800
           +  +W G+  EAK  GN                L  A K I+N+FYG +     R++   
Sbjct: 470 VTNIWHGR-DEAKRQGNK--------------PLSQALKIIMNAFYGVLGTTACRFFDPR 514

Query: 801 MAGVVTYTGAKIIQNARLLIEKIG-KPLELDTDGIWCVLPGSFPENFTFKTKDLKKKLTI 859
           +A  +T  G +I++  + LIE  G   +  DTD  +  L G+  E    K          
Sbjct: 515 LASSITMRGHQIMRQTKALIEAQGYDVIYGDTDSTFVWLKGAHSEEEAAKIGR------- 567

Query: 860 SYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEFEVDGPYKAMILPASKEEGI 919
               ++ +V+V    T  Q Q L   +   YETH            +   ++P  +    
Sbjct: 568 ---ALVQHVNVWWAETL-QKQQLTSALELEYETH------------FCRFLMPTIRGADT 611

Query: 920 LIKKRYA--VFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFLHGSTIEE 970
             KKRYA  +  DD      KG E  R     L + FQ EL+ +       +E
Sbjct: 612 GSKKRYAGLIQEDDQQRMVFKGLETVRTDWTPLAQQFQQELYLRIFRNEPYQE 664



 Score = 40.8 bits (94), Expect = 8.0,   Method: Compositional matrix adjust.
 Identities = 55/241 (22%), Positives = 99/241 (41%), Gaps = 27/241 (11%)

Query: 311 IELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDKNQGECRA 370
           +E L  WFA+     P + + +N   FD   L+  A    +++   LG   D ++ E R 
Sbjct: 205 LEKLNAWFANYD---PDVIIGWNVVQFDLRMLQKHAER--YRIPLRLG--RDNSELEWRE 257

Query: 371 KFACHLDCFAWVK-----------RDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMV--- 416
               +   FA  K           + ++    S  L+ V +  LG      NP D +   
Sbjct: 258 HGFKNGVFFAQAKGRLIIDGIEALKSAFWNFSSFSLETVAQELLGEGKSIDNPWDRMDEI 317

Query: 417 --RFAKEKPQMMASYSVSDA-VATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCE 473
             RFA++KP  +A+Y++ D  + T   + T + PF+   AT+  +  D     GS     
Sbjct: 318 DRRFAEDKP-ALATYNMKDCELVTQIFHKTEIMPFLLERATVNGLPVDR--HGGSVAAFG 374

Query: 474 MLLMVQAYKANVICPNKHQSDPEKFYRNHLLESETYIGGHVECLESGVFRSDLPTSFKLD 533
            L   + ++A  + PN  +  P      ++++S   +   V  L+       +  +F +D
Sbjct: 375 HLYFPRMHRAGYVAPNLGEVPPHASPGGYVMDSRPGLYDSVLVLDYKSLYPSIIRTFLID 434

Query: 534 P 534
           P
Sbjct: 435 P 435


>gi|307595942|ref|YP_003902259.1| DNA-directed DNA polymerase [Vulcanisaeta distributa DSM 14429]
 gi|307551143|gb|ADN51208.1| DNA-directed DNA polymerase [Vulcanisaeta distributa DSM 14429]
          Length = 875

 Score = 53.5 bits (127), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 78/333 (23%), Positives = 138/333 (41%), Gaps = 52/333 (15%)

Query: 225 PLLEKRVDLLQRAEVHVCAFDIETTKLPLKFPDADYDIIMMISYMLDGQGYLIINR---- 280
           PL +  V  ++R  + +  F  +  ++P    +A+Y+II +     DG   +++ R    
Sbjct: 214 PLFQAPVPNIKRLSLDIEVFTPQENRVP-NPKEANYEIISIGLAGSDGLKKVLVLRRPDM 272

Query: 281 ECVGEDIEDLEYTPKPEFEGYFKVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWP 340
           E   ED+E+L Y          +V   ++E ++L+  F+ + +    I +T+NGD FD P
Sbjct: 273 ELRPEDLENLMYDD-------VEVEFFDSEYDMLKELFSIILQYP--ILITFNGDNFDLP 323

Query: 341 FLETRAAHHGFKMSEELGFQCDKNQGECRAKFACHLDCFAWVK---RDSYLPQGS----- 392
           ++  RA   GFK  EE+     +N  E       HLD + +      + Y   G      
Sbjct: 324 YIYHRALKLGFK-KEEIPIVLRRN--EASIALGIHLDLYKFFNIRAIEVYAFSGKYRGMD 380

Query: 393 QGLKAVTKAKLGYDPLEVNPEDMVRFAKEKP--QM----MASYSVSDAVATYYLYMTY-- 444
           + L  +  A +G          M + +++KP  QM    + +Y+  DA    YL  TY  
Sbjct: 381 RTLDTIAHAIIG----------MSKLSRDKPVSQMNYVELINYNFRDAFLGLYL-TTYDN 429

Query: 445 --VHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVICPNKHQSDPEK--FYR 500
             V   I  ++ I    PD+++R         +L  +  +   + P K      K     
Sbjct: 430 NLVLRLIILMSRISKTPPDDLVRSQISAWIRNMLYYEHRRRGWLIPEKEDIVKAKGDVAT 489

Query: 501 NHLLESETYIGGHVECLESGVFRSDLPTSFKLD 533
             +++ + Y G  V     G+F    P  + LD
Sbjct: 490 KAIIKGKKYAGAIVLEPMPGIF----PNVYVLD 518


>gi|421748668|ref|ZP_16186234.1| DNA polymerase II [Cupriavidus necator HPC(L)]
 gi|409772581|gb|EKN54559.1| DNA polymerase II [Cupriavidus necator HPC(L)]
          Length = 801

 Score = 53.5 bits (127), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 80/358 (22%), Positives = 132/358 (36%), Gaps = 77/358 (21%)

Query: 727  TVRSFRDRRYEYKG------LNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHKC 780
            TV  FR  R+          + ++W+G+   AK  GN                L  A K 
Sbjct: 466  TVPGFRGARFSRDSHALPAIVAEIWQGR-DAAKRDGNK--------------PLSQALKI 510

Query: 781  ILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLPG 840
            I+N+FYG +   G R++   +A  +T  G +I++  R L+E  G          + V+ G
Sbjct: 511  IMNAFYGVLGSTGCRFFDARLASSITMRGHEIMRRTRELVEGRG----------YTVIYG 560

Query: 841  SFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETH------S 894
                 F                 V L    A +  +   + LV  ++  +  H       
Sbjct: 561  DTDSTF-----------------VALGRRHADDEADRIGRELVAHINGWWREHLRRHYGL 603

Query: 895  ECSIEFEVDGPYKAMILPASKEEGILIKKRYA--VFNDDGT-LAELKGFEIKRRGELKLI 951
            + ++E + +  Y+  ++P  +      KKRYA  V   DG+     KG E  R     L 
Sbjct: 604  DSALEIQYETHYRRFLMPTVRGAEDGSKKRYAGLVRGADGSEQMVFKGLEAVRTDWSPLA 663

Query: 952  KVFQAELFDKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKS 1011
            + FQ EL+ +   G    E Y+          D + +    +   EL   +     + + 
Sbjct: 664  QAFQQELYRRVFQG----EPYA----------DYVRDYVARLLRGELDALLVYRKRLRRQ 709

Query: 1012 LADYGEQKSCAVTTARRLSDF---LGDTMVKDKGLRCQYIVA-CEPQGTPVSERAVPV 1065
            L DY       V  AR   DF    G  +   +G   QY++    P+  P+  R  P+
Sbjct: 710  LDDYQRNVPPHVRAARVADDFNRERGRPLQYRQGAWIQYVITMAGPE--PLEVRRAPI 765


>gi|88857892|ref|ZP_01132534.1| DNA polymerase II [Pseudoalteromonas tunicata D2]
 gi|88819509|gb|EAR29322.1| DNA polymerase II [Pseudoalteromonas tunicata D2]
          Length = 780

 Score = 53.5 bits (127), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 54/199 (27%), Positives = 79/199 (39%), Gaps = 25/199 (12%)

Query: 774 LQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIG-KPLELDTD 832
           L  A K I+NSFYG +   G R+Y   ++  +T  G +I+   R  IE++G + +  DTD
Sbjct: 486 LSQAIKIIMNSFYGVLGSTGCRFYDPRLSSSITLRGHEIMLATRAEIERLGYQVIYGDTD 545

Query: 833 GIWCVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYET 892
             +  L          K   L +K   ++ C                    D   K Y+ 
Sbjct: 546 STFVQLASELSAEECKKIGFLLQKKINNFWC--------------------DYCEKKYKI 585

Query: 893 HSECSIEFEVDGPYKAMILPASKEEGILIKKRYA--VFNDDGTLAELKGFEIKRRGELKL 950
            S   IEFE    Y    +P  +      KKRY   V + +G     KG E  R    +L
Sbjct: 586 ASYLEIEFET--LYSPFFMPTIRGSLEGSKKRYVGQVSDANGDHLVFKGMETVRSDWTEL 643

Query: 951 IKVFQAELFDKFLHGSTIE 969
            + FQ  LF     G ++E
Sbjct: 644 AREFQYNLFTLIFAGDSVE 662


>gi|359449452|ref|ZP_09238945.1| DNA polymerase II [Pseudoalteromonas sp. BSi20480]
 gi|358044762|dbj|GAA75194.1| DNA polymerase II [Pseudoalteromonas sp. BSi20480]
          Length = 787

 Score = 53.5 bits (127), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 49/193 (25%), Positives = 82/193 (42%), Gaps = 25/193 (12%)

Query: 774 LQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIG-KPLELDTD 832
           L  A K I+NS YG +  KG R+Y   ++  +T  G +I+Q  R  +E++G   +  DTD
Sbjct: 489 LSQAIKIIMNSLYGVLGSKGCRFYDPRLSSSITLRGHEIMQTTRKWMEELGYSVIYGDTD 548

Query: 833 GIWCVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYET 892
            I+                 +K   +++  C     +    + N Q++     ++K +  
Sbjct: 549 SIF-----------------VKVDESLTAQCCNKIGNELMTHINHQWER---HIAKHFNL 588

Query: 893 HSECSIEFEVDGPYKAMILPASKEEGILIKKRYA--VFNDDGTLAELKGFEIKRRGELKL 950
            S   IEFE    Y    +P  +++    KKRY   +   D +    KG E  R    + 
Sbjct: 589 KSYLEIEFETH--YSPFFMPTIRDKKTGSKKRYVGKIVKGDESKIVFKGMETVRSDWTEF 646

Query: 951 IKVFQAELFDKFL 963
            + FQ ELF+   
Sbjct: 647 AQEFQKELFEALF 659


>gi|324120738|dbj|BAJ78760.1| DNA polymerase delta catalytic subunit [Anacanthocoris striicornis]
          Length = 1091

 Score = 53.5 bits (127), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 70/315 (22%), Positives = 120/315 (38%), Gaps = 59/315 (18%)

Query: 68  LYFVSQDGSTFKSK-YKFRPYFYAATKEKMEMDVEAYLRRRYESQIADIEILEKEDLDLK 126
           +Y V+ +G++     + F PYFY  T    + +     +   +  I D         D+K
Sbjct: 110 MYGVTMEGNSVCCHVHGFTPYFYVLTPTTFKEEHIKPFKDALDRGILD---------DMK 160

Query: 127 NHLSGLHKSYLKISFDTVQQLMDVKKDLLHVVERNQAKFD----AAEAYESILTGKREQR 182
           ++   + ++ + +     Q +     D         AKF     +    + I T KR   
Sbjct: 161 SNPDNVQEAVVGVELVYRQSIFGYSGD---------AKFPFLKISVAVPKLIATAKRIIE 211

Query: 183 PQDFLDCIVDLR----EYDVPYHIRFAIDNDVRCGQWYDVSISSTG---------PLL-- 227
             D             E ++ + IRF +DN +    W ++   S           PL   
Sbjct: 212 KNDIFPTFPGFYGQVFETNIDFDIRFMVDNKITGCNWIELHPKSYSLRTPDTTRIPLSRC 271

Query: 228 --------------EKRVDLLQRAEVHVCAFDIETTKLPLKFPDADYDIIMMISYMLDGQ 273
                         E   D L+ A   + +FDIE       FP+ + D ++ I+ M+  Q
Sbjct: 272 QIEVDVAFNRIVSHEPEGDWLKIAPFRILSFDIECAGRKGIFPEPNQDPVIQIANMVVCQ 331

Query: 274 GYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNVNNEIELLRLWFAHMQEVKPGIYVTYN 333
           G      E    +I  L+ +  P      +V +  +E ELL  W   ++EV P ++  YN
Sbjct: 332 G----EHEPFIRNIFTLK-SCAPILGS--QVISFEDERELLEKWAEFVREVDPDLFTGYN 384

Query: 334 GDYFDWPFLETRAAH 348
            + FD+P+L  RA H
Sbjct: 385 INNFDFPYLINRANH 399


>gi|329765298|ref|ZP_08256878.1| DNA polymerase I [Candidatus Nitrosoarchaeum limnia SFB1]
 gi|329138204|gb|EGG42460.1| DNA polymerase I [Candidatus Nitrosoarchaeum limnia SFB1]
          Length = 852

 Score = 53.5 bits (127), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 59/231 (25%), Positives = 97/231 (41%), Gaps = 28/231 (12%)

Query: 330 VTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDKNQGECRAKFACHLDCFAWVKRDSY-L 388
           VTYNGD FD P+L  RA   G K  E   +     +     K   HLD +  +   S+ +
Sbjct: 288 VTYNGDEFDLPYLYNRAERLGIKKEENPLYMM---KDSATLKQGVHLDLYRTLSNRSFQI 344

Query: 389 PQGSQ-----GLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQMMASYSVSDAVATYYLYMT 443
              SQ      L +V+KA L  + ++   E    F +      A+Y  +DA+ TY L  +
Sbjct: 345 YAFSQKYTDFSLNSVSKALLNKEKIDYGLE----FDQLSLYQTANYCYNDALLTYEL-TS 399

Query: 444 YVHPFIFSLATIIP----MSPDEVLRKGSGTLCEMLLMVQAYKANVICPNKHQSD--PEK 497
           +    +  L  II     M  D++ R G       LL  +  + N + P + + +   E 
Sbjct: 400 FNKDLLMDLLVIISRIGRMPIDDIARMGVSQWIRSLLYYEHRQRNALIPKREELEKRSEG 459

Query: 498 FYRNHLLESETYIGGHVECLESGV--------FRSDLPTSFKLDPSAYEQL 540
              + +++ + Y GG V   + G+        F S  P+  K+   +YE +
Sbjct: 460 VTSDAVIKDKKYRGGLVIDPKEGIHFDVVVMDFASLYPSIIKVRNISYETV 510


>gi|393221988|gb|EJD07472.1| hypothetical protein FOMMEDRAFT_137775 [Fomitiporia mediterranea
            MF3/22]
          Length = 1441

 Score = 53.5 bits (127), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 69/268 (25%), Positives = 112/268 (41%), Gaps = 55/268 (20%)

Query: 768  VVLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIG-KP 826
            ++ YD  Q A K   NS YG +  + +R+Y+  +A + TY G +I+   R L E  G   
Sbjct: 930  MLQYDIKQQALKLTANSMYGCLGFEYSRFYARPLAALTTYKGREILARTRELAENQGLDV 989

Query: 827  LELDTDGIWCVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPV 886
            +  DTD I+                +L + L IS        D  +   N+QY       
Sbjct: 990  IYGDTDSIFV----------NSNVTELPQALRIS--------DTFKKLVNEQY------- 1024

Query: 887  SKTYETHSECSIEFEVDGPYKAMILPASKEEGILIKKRYA---VFNDDGTLAELKGFEIK 943
                       +E ++DG ++ ++L        L KK+YA   V + + T  E+KG ++K
Sbjct: 1025 ---------VKLEIDLDGIFQRLLL--------LQKKKYAALKVEDAERTSVEVKGLDMK 1067

Query: 944  RRGELKLIKVFQAELFDKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDI-ADSELIDYI 1002
            RR   +L K     + +  L G   E        V  +  + L   G+++  D   +D  
Sbjct: 1068 RREYCQLSKDTSHHILEMVLSGEATE-------TVVEQIHEHLSKLGEEVRGDKINLDKF 1120

Query: 1003 SESSTMSKSLADYGEQKSCA-VTTARRL 1029
              +  + K+  DY + KS   VT A RL
Sbjct: 1121 IINKRLGKNPEDYPDAKSQPHVTVALRL 1148


>gi|393226323|gb|EJD34100.1| putative delta DNA polymerase [Auricularia delicata TFB-10046 SS5]
          Length = 961

 Score = 53.1 bits (126), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 66/285 (23%), Positives = 104/285 (36%), Gaps = 57/285 (20%)

Query: 195 EYDVPYHIRFAIDNDVRCGQWYDVSI------------SSTGPLLEKRVDLL-------- 234
           E +V Y +RF +D  V    W  V              SS    L+ R D          
Sbjct: 101 ESNVGYILRFMVDTHVVGMNWVTVPAGKYKLRTSQTRRSSCQIELDVRWDEFISHTPEGE 160

Query: 235 --QRAEVHVCAFDIETTKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGED---IED 289
               A + + +FDIE       FPD   D ++ I+ ++  QG          ED   I +
Sbjct: 161 WSAMAPLRILSFDIECAGRKGIFPDPQVDPVIQIASLVTKQG----------EDKPFIRN 210

Query: 290 LEYTPKPEFEGYFKVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHH 349
           +       +     + + N E+ELL  W   +  V P + + YN   FD P+L  RA   
Sbjct: 211 VFTLKSCSYIAGSDILSFNEEVELLSAWRNFLGTVDPDVIIGYNTTNFDLPYLLKRANAR 270

Query: 350 GFKMSEELG-----------------FQCDKNQGECRAKFACHLDCFAWVKRDSYLPQGS 392
           G +   +LG                    D++  EC        D F +++++  L   S
Sbjct: 271 GVQGFNKLGRLLHIGTSVKEVHSSSRASGDRDSKECNINGRLQFDIFQYMQKEYKLRTYS 330

Query: 393 QGLKAVTKAKLGYDPLEVNPEDMVRFAKEKP---QMMASYSVSDA 434
             L AV+   LG    +V+   +       P   + +A Y + DA
Sbjct: 331 --LNAVSAKFLGEQKEDVHHSIISELQNGTPDSRRRLAIYCLKDA 373


>gi|324120768|dbj|BAJ78775.1| DNA polymerase delta catalytic subunit [Ctenocephalides felis]
          Length = 1002

 Score = 53.1 bits (126), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 49/194 (25%), Positives = 84/194 (43%), Gaps = 32/194 (16%)

Query: 195 EYDVPYHIRFAIDNDVRCGQWYDV---------SISSTGPLLEKRV-------------- 231
           E ++ + IRF +D  V    W ++           S+  P+   ++              
Sbjct: 139 ETNIDFDIRFMVDTGVVGCSWIELPAGKWRLRNGFSNPKPISRCQIEVDIGWDAFVAKVP 198

Query: 232 --DLLQRAEVHVCAFDIETTKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIED 289
             D  + A   + +FDIE       FP+  +D ++ I+ M+  QG     +E    ++  
Sbjct: 199 EGDWAKVAPFRILSFDIECAGRKGIFPEPQHDPVIQIANMVITQG----EQEPYLRNVFT 254

Query: 290 LEYTPKPEFEGYFKVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHH 349
           L+ +  P      +V   + E ELL  W A ++E+ P ++  YN + FD+P+L  RAAH 
Sbjct: 255 LK-SCAPIVGS--QVLCYDKEEELLEAWAAFIRELDPDVFTGYNINNFDFPYLLRRAAHL 311

Query: 350 GFKMSEELGFQCDK 363
             K  + LG   DK
Sbjct: 312 KVKNFDFLGRVRDK 325


>gi|194289660|ref|YP_002005567.1| DNA polymerase II [Cupriavidus taiwanensis LMG 19424]
 gi|193223495|emb|CAQ69500.1| DNA polymerase II and 3'-> 5' exonuclease, DNA polymerase type-B
           family [Cupriavidus taiwanensis LMG 19424]
          Length = 788

 Score = 53.1 bits (126), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 63/249 (25%), Positives = 102/249 (40%), Gaps = 45/249 (18%)

Query: 725 VDTVRSFRDRRYEYKG------LNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAH 778
            D V  FR  R+          + +VW+G+   AK  GN                L  A 
Sbjct: 449 ADAVPGFRGARFSRTKHCLPAIVARVWQGR-EAAKRDGNK--------------PLAQAL 493

Query: 779 KCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVL 838
           K I+N+FYG +   G R++   +A  +T  G +I++  R LIE  G          + V+
Sbjct: 494 KIIMNAFYGVLGSSGCRFFDARLASSITMRGHEIMRQTRALIEARG----------YEVI 543

Query: 839 PGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSI 898
            G     F +    L++  T +    +    VA    ND ++   D + + Y   S   +
Sbjct: 544 YGDTDSTFVW----LRRARTEADAAQIGRSLVA--YVNDWWR---DHLWQAYGLESALEL 594

Query: 899 EFEVDGPYKAMILPASKEEGILIKKRYA--VFNDDGTLAEL-KGFEIKRRGELKLIKVFQ 955
           +FE    ++  ++P  +   +  KKRYA  V    GT   + KG E  R     L + FQ
Sbjct: 595 QFETH--FRRFLMPTIRGTDLGSKKRYAGQVERPGGTREMVFKGLETVRTDWSPLAQRFQ 652

Query: 956 AELFDKFLH 964
             L++K  +
Sbjct: 653 QTLYEKVFN 661


>gi|385811722|ref|YP_005848118.1| DNA polymerase II [Ignavibacterium album JCM 16511]
 gi|383803770|gb|AFH50850.1| DNA polymerase II [Ignavibacterium album JCM 16511]
          Length = 768

 Score = 53.1 bits (126), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 88/391 (22%), Positives = 158/391 (40%), Gaps = 54/391 (13%)

Query: 657  KKQIESEFVDGTNGHLSKSF--LDLPKMEQQSRLKDRLK--KYCQKAYKRVLDKPVTELR 712
            + QI   F+D   G ++ +F    LP + ++  +   L+  K  + A    + +P   + 
Sbjct: 355  RSQISGLFIDQL-GMMTNAFDHFYLPLLHRKGFVAPNLRDIKTTEHAEGGFVIEPEPGIY 413

Query: 713  EAGICMRENSFYVDTVRSFRDRRYEYKGLNKVWKGKLSEAKASGNSIKI--------QEA 764
            +  + +   S Y   +R+F+   Y     +K     L++ K S     +         + 
Sbjct: 414  DNIVVLDFKSLYPSIIRTFKIDPYSLLMKDKNTIQTLNDYKFSATEHILPDYIDELMAQR 473

Query: 765  QDMVVLYDS-LQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIE-K 822
            +D +   D  L  A K ++NSFYG +   G R+Y  ++   +T TG K++  ++  +E K
Sbjct: 474  KDAIAKGDKQLSQAIKILMNSFYGVMGSYGCRFYHPDLPRAITGTGHKLLLGSKDYLESK 533

Query: 823  IGKPLELDTDGIWCVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTL 882
              K +  DTD ++  L      +   + K + ++L                  N+ +QT 
Sbjct: 534  DYKVVYGDTDSLFIKLKEVGSNDGETQGKLIAEEL------------------NNYWQT- 574

Query: 883  VDPVSKTYETHSECSIEFEVDGPYKAMILPASKEEGILIKKRYA-VFNDDGTLA-ELKGF 940
               +   Y   S   +EFE    Y+  I+  ++      KKRYA + + DG  A E  G 
Sbjct: 575  --KLKNEYNVQSYLELEFE--KFYEKFIITPARGSETGAKKRYAGLISKDGKKAIEFVGM 630

Query: 941  EIKRRGELKLIKVFQAELFDKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELID 1000
            E  R    KL K FQ EL+ +   G  +E              D +    KD+ + +  D
Sbjct: 631  EFVRSDWTKLAKEFQEELYMRIFSGEEVE--------------DFIRKTIKDLKEGKYDD 676

Query: 1001 YISESSTMSKSLADYGEQKSCAVTTARRLSD 1031
             +     + K + DY +     V  A+ L +
Sbjct: 677  KLIYRKRLRKEIEDYTKNVPPHVRAAKMLRE 707


>gi|90578776|ref|ZP_01234586.1| DNA polymerase II [Photobacterium angustum S14]
 gi|90439609|gb|EAS64790.1| DNA polymerase II [Photobacterium angustum S14]
          Length = 794

 Score = 53.1 bits (126), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 70/273 (25%), Positives = 102/273 (37%), Gaps = 42/273 (15%)

Query: 777  AHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWC 836
            A K I+NSFYG +   G R++   +A  +T  G +I++  R LIE  G          + 
Sbjct: 501  AIKIIMNSFYGVLGSSGCRFFDHRLASSITMRGHEIMKLTRELIETKG----------YE 550

Query: 837  VLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSEC 896
            V+ G     F      LKK  +      + N  VA  N     Q     +   Y   S  
Sbjct: 551  VIYGDTDSTFV----SLKKGHSQDDANAIGNDLVAYIN-----QWWTAHLRDEYGLTSAL 601

Query: 897  SIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAEL--KGFEIKRRGELKLIKVF 954
             IE+E    Y   ++P  + +    KKRYA     G   E+  KG E  R     L + F
Sbjct: 602  EIEYETH--YHKFLMPTIRGQETGSKKRYAGLVWRGGKEEIVFKGLETVRTDWTPLAQHF 659

Query: 955  QAELFDKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLAD 1014
            Q  L+    HG  ++              D + +  +     E  D +     + ++LAD
Sbjct: 660  QQSLYQMVFHGQDVD--------------DYVRDYTQRTLAGEFDDLLIYRKRLRRNLAD 705

Query: 1015 YGEQKSCAVTTARRLSDFLGDTMVKDKGLRCQY 1047
            Y +     V  AR     L D M    G   QY
Sbjct: 706  YQKNIPPQVRAAR-----LADEMNLKLGRPLQY 733


>gi|301061070|ref|ZP_07201867.1| putative DNA polymerase II [delta proteobacterium NaphS2]
 gi|300444864|gb|EFK08832.1| putative DNA polymerase II [delta proteobacterium NaphS2]
          Length = 787

 Score = 53.1 bits (126), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 65/266 (24%), Positives = 106/266 (39%), Gaps = 34/266 (12%)

Query: 773  SLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIG-KPLELDT 831
            +L  A K ++NSFYG +  +G R+Y   +AG +T TG  ++  ++  IE+ G + +  DT
Sbjct: 489  TLSQAVKILMNSFYGVLGSQGCRFYDPRIAGTITRTGHWVLNFSKKFIEQNGFRVIYGDT 548

Query: 832  DGIWCVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYE 891
            D ++  L           T D KK          +N ++ +N  +         + + + 
Sbjct: 549  DSLFVCL----------GTGDSKK----------IN-ELGQNLVSRLNAFFKKELKERFG 587

Query: 892  THSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVF---NDDGTLAELKGFEIKRRGEL 948
              S   IEFE    +    +P  + +    KKRYA     N   +     G E  RR   
Sbjct: 588  VESYLDIEFE--KIFLRFFMPTIRGQDSGSKKRYAGLLSGNRGKSKLYFAGLESSRRDWT 645

Query: 949  KLIKVFQAELFDKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTM 1008
             L K  Q++LF          +    +        +L+  +   +   EL   +     +
Sbjct: 646  TLAKKIQSDLFALIFADYDEPDLKETLE-------ELVKERHHQLFAGELDQQLIYRKGI 698

Query: 1009 SKSLADYGEQKSCAVTTARRLSDFLG 1034
            SK L DY +     V  AR L DF G
Sbjct: 699  SKPLKDYTKTAPPHVRAARMLDDFEG 724


>gi|188025635|ref|ZP_02959307.2| hypothetical protein PROSTU_01143 [Providencia stuartii ATCC 25827]
 gi|386744303|ref|YP_006217482.1| DNA polymerase II [Providencia stuartii MRSN 2154]
 gi|188022569|gb|EDU60609.1| putative DNA polymerase II [Providencia stuartii ATCC 25827]
 gi|384480996|gb|AFH94791.1| DNA polymerase II [Providencia stuartii MRSN 2154]
          Length = 783

 Score = 53.1 bits (126), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 67/314 (21%), Positives = 125/314 (39%), Gaps = 62/314 (19%)

Query: 727  TVRSFRDRRYEYKG------LNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHKC 780
            +VR FR   +  K       ++ +W+G+  +AK  GN+               L  A K 
Sbjct: 452  SVRGFRQAWFSRKTHCLPDIVSHIWQGR-DKAKREGNA--------------PLSQALKI 496

Query: 781  ILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIG-KPLELDTDGIWCVLP 839
            I+N+F G +  +G R++   +   +T  G +I++  + LIE  G + +  DTD  +  L 
Sbjct: 497  IMNAFAGVLGAEGCRFFDPRLTASITMRGHEIMKITKQLIEAKGYQVIYGDTDSTFVWLK 556

Query: 840  GSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQY-QTLVDPVSKTYETHSECSI 898
             +        T++  +++              R+  N+ + Q L D      E   E  +
Sbjct: 557  EA-------HTQEQAQRIGFE----------LRDYVNNWWKQHLRD------EWQLEGVL 593

Query: 899  EFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAEL 958
            E E +  Y+  ++P  +      KKRYA  + D  +   +G E  R     L ++FQ EL
Sbjct: 594  ELEYETHYRRFLMPTIRGSESGSKKRYAGLSGDKMV--FRGLETIRSDWTPLAQLFQKEL 651

Query: 959  FDKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLADYGEQ 1018
            + +  H     E               + +  + I + E  + +     + + L+DY   
Sbjct: 652  YTRIFHRQPYRE--------------FIRDYVQAIRNGEYDERLVYRKRLRRKLSDYQRN 697

Query: 1019 KSCAVTTARRLSDF 1032
                V  AR+  ++
Sbjct: 698  VPPHVRAARKADEY 711


>gi|260768674|ref|ZP_05877608.1| DNA polymerase II [Vibrio furnissii CIP 102972]
 gi|260616704|gb|EEX41889.1| DNA polymerase II [Vibrio furnissii CIP 102972]
          Length = 787

 Score = 53.1 bits (126), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 48/197 (24%), Positives = 81/197 (41%), Gaps = 35/197 (17%)

Query: 777 AHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWC 836
           A K I+NSFYG +   G R++   +A  +T  G +I++  + LIE  G          + 
Sbjct: 494 AIKIIMNSFYGVLGSSGCRFFDTRLASSITMRGHEIMKQTKQLIEAQG----------YQ 543

Query: 837 VLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSE- 895
           V+ G     F                 V L  + A+++ +   Q LV  +++ +  H + 
Sbjct: 544 VIYGDTDSTF-----------------VSLGREHAQHDADAIGQGLVQHINQWWTNHLQQ 586

Query: 896 -----CSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAEL--KGFEIKRRGEL 948
                  +E E +  Y+  ++P  +      KKRYA    +G    +  KG E  R    
Sbjct: 587 EYALTSILELEYETHYRKFLMPTIRGAETGSKKRYAGLIGEGDKERMVFKGLESARTDWT 646

Query: 949 KLIKVFQAELFDKFLHG 965
            L + FQ +L+    HG
Sbjct: 647 PLAQRFQHQLYWMIFHG 663


>gi|284118970|ref|ZP_06386770.1| conserved hypothetical protein [Candidatus Poribacteria sp. WGA-A3]
 gi|283829449|gb|EFC33823.1| conserved hypothetical protein [Candidatus Poribacteria sp. WGA-A3]
          Length = 238

 Score = 53.1 bits (126), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 41/145 (28%), Positives = 73/145 (50%), Gaps = 16/145 (11%)

Query: 308 NNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDKNQG- 366
            +E ELLR ++A + E++P +++T+NG  FD PFL+ R+  H  K S E+     + +  
Sbjct: 91  THEQELLRRFWARLGELRPALFITHNGLGFDLPFLKKRSIIHRVKPSMEISLARFRTEPV 150

Query: 367 -ECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQM 425
            +  A ++ + D   WVK D      ++ L+  TK+  G    ++       +A+ + + 
Sbjct: 151 YDTMAIWS-NWDTRGWVKLDVL----ARALQVETKSGSGKQVADM-------WAQGRRRE 198

Query: 426 MASYSVSDAVATYYLY--MTYVHPF 448
           +A Y + D   TY  Y  MT+  P 
Sbjct: 199 IAEYCLRDTYVTYACYQRMTFRAPL 223


>gi|159040732|ref|YP_001539984.1| DNA polymerase I [Caldivirga maquilingensis IC-167]
 gi|157919567|gb|ABW00994.1| DNA polymerase B region [Caldivirga maquilingensis IC-167]
          Length = 871

 Score = 53.1 bits (126), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 79/329 (24%), Positives = 135/329 (41%), Gaps = 43/329 (13%)

Query: 225 PLLEKRVDLLQRAEVHVCAFDIETTKLPLKFPDADYDIIMMISYMLDG-QGYLIINRECV 283
           PL +  V  L+R  + +  +  +  K+P    +A Y+II +     DG +  L++ R  +
Sbjct: 210 PLFQAPVPPLKRIAIDIEVYTPQENKIP-NPKEALYEIIAIGLAGSDGLKRVLVLRRPEI 268

Query: 284 GEDIEDLEYTPKPEFEGYFKVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLE 343
             + +D       + E  F     +NE +LLR +F  +      I +T+NGD FD  ++ 
Sbjct: 269 LMNADDQGMLLSDDVEVMF----FDNERDLLREFFKTIMAYP--ILITFNGDSFDLTYIY 322

Query: 344 TRAAHHGFKMSEELGFQCDKNQGECRAKFACHLDCFAWVKRDSY--------LPQGSQGL 395
            RA   GF+  EEL     ++ GE R     H+D + +    +            G + L
Sbjct: 323 NRALKLGFR-KEELPIILTRD-GEARYVLGVHIDLYKFFNIRAVEVYAFGGKYSGGEKTL 380

Query: 396 KAVTKAKLGYDPLEVNPEDMVRFAKEKP--QM----MASYSVSDAVATYYLYM---TYVH 446
            A+  A LG   +E          +EKP  +M    + +Y+  DA+ T YL       V 
Sbjct: 381 DAIASALLGISKVE----------REKPISEMNYIELVNYNFRDALLTLYLTTFNNELVM 430

Query: 447 PFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVICPNKHQSDPEK--FYRNHLL 504
             I  LA I     ++V R         ++  +  K   + PNK      K       ++
Sbjct: 431 RLIVLLARISKTPLNDVSRYQVSAWIRNMVYFEHRKRGWLIPNKEDVVNAKGSVATKAII 490

Query: 505 ESETYIGGHVECLESGVFRSDLPTSFKLD 533
           +++ Y G  V    +G++    P  + LD
Sbjct: 491 KNKKYAGAIVIEPIAGIY----PNVYVLD 515


>gi|238797481|ref|ZP_04640979.1| DNA damage-inducible DNA polymerase II [Yersinia mollaretii ATCC
           43969]
 gi|238718622|gb|EEQ10440.1| DNA damage-inducible DNA polymerase II [Yersinia mollaretii ATCC
           43969]
          Length = 808

 Score = 53.1 bits (126), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 55/222 (24%), Positives = 93/222 (41%), Gaps = 40/222 (18%)

Query: 741 LNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHKCILNSFYGYVMRKGARWYSME 800
           +N++W+G+   AK   N                L  A K I+N+FYG +   G R++   
Sbjct: 494 VNQIWQGR-EAAKRQQNK--------------PLSQALKIIMNAFYGVLGSSGCRFFDPR 538

Query: 801 MAGVVTYTGAKIIQNARLLIEKIG-KPLELDTDGIWCVLPGSFPENFTFKTKDLKKKLTI 859
           +A  +T  G +I++  R LIE  G + +  DTD  +  L  +  E    +   + K+L  
Sbjct: 539 LASSITLRGHEIMRQTRELIEAQGYQVIYGDTDSTFVWLKNAHSEA---QASRIGKELV- 594

Query: 860 SYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEFEVDGPYKAMILPASKEEGI 919
                         + N  +Q   + + +T+     C++E E +  Y+  ++P  +    
Sbjct: 595 -------------QHVNQWWQ---NHIRETFNL--PCALELEFETHYRRFLMPTIRGAEQ 636

Query: 920 LIKKRYA--VFNDDGTLAELKGFEIKRRGELKLIKVFQAELF 959
             KKRYA  +    G     KG E  R     L + FQ EL+
Sbjct: 637 GSKKRYAGLISTPTGDQMVYKGLETVRTDWTPLAQQFQRELY 678


>gi|383863019|ref|XP_003706980.1| PREDICTED: LOW QUALITY PROTEIN: DNA polymerase alpha catalytic
            subunit-like [Megachile rotundata]
          Length = 1380

 Score = 53.1 bits (126), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 78/305 (25%), Positives = 129/305 (42%), Gaps = 68/305 (22%)

Query: 771  YDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIG-KPLEL 829
            Y+  QLA K   NS YG +     R+Y+  +A +VT  G +I+Q+ + L+EK+  + +  
Sbjct: 845  YNIRQLALKLTANSMYGCLGASHCRFYAKGLAALVTAKGREILQHTKSLVEKLNYEVIYG 904

Query: 830  DTDGIW-CVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSK 888
            DTD I  C     + E F+   K                              +   V+K
Sbjct: 905  DTDSIMICTNVLDYDEVFSVGKK------------------------------IKQEVNK 934

Query: 889  TYETHSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFN----DDGTL---AELKGFE 941
             Y+      +E ++DG ++ ++L        L KK+YA        +G +    ELKG +
Sbjct: 935  LYK-----RVELDIDGVFRYLLL--------LQKKKYAAVTMTKLPNGQIELTQELKGLD 981

Query: 942  IKRRGELKLIKVFQAELFDKFLHGST----IEECYSAVAAVANRWLDLLDNQGKDIADSE 997
            I RR   +L      ++ D+ L   +    IE+ +S +  VA     + +NQ   ++ S 
Sbjct: 982  IVRRDWCQLACDVGKKILDQLLSDGSDEDRIEQIFSLLQDVA---ASVRENQ---VSLSS 1035

Query: 998  LIDYISESSTMSKSLADYGEQKSCAVTTARRLSDFLGDTMVKDKGLRCQYIVACEPQGTP 1057
            L+     +  +SK+  DY + K   V  A RL+   G  M K  G    YI+  +     
Sbjct: 1036 LVI----TKQLSKNPNDYPDAKQAHVQVALRLNKE-GGRMWK-AGDTVPYIICDDGTEKS 1089

Query: 1058 VSERA 1062
             +ERA
Sbjct: 1090 ATERA 1094


>gi|326795402|ref|YP_004313222.1| DNA polymerase B region [Marinomonas mediterranea MMB-1]
 gi|326546166|gb|ADZ91386.1| DNA polymerase B region [Marinomonas mediterranea MMB-1]
          Length = 801

 Score = 53.1 bits (126), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 61/213 (28%), Positives = 92/213 (43%), Gaps = 45/213 (21%)

Query: 751 EAKASGNSIKIQEAQDMVVLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGA 810
           EAK +GN I              L  A K I+NSFYG +     R+Y  E+A  +T  G 
Sbjct: 499 EAKRNGNEI--------------LSYAIKIIMNSFYGVLGSNVCRFYHAELASSITMRGH 544

Query: 811 KIIQNARLLIEKIG-KPLELDTDGIWCVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVD 869
           +++  ++  +E+ G K +  DTD ++  L  S P+    + KD   +L     C ++N  
Sbjct: 545 ELLDRSKKWMEEQGAKVIYGDTDSLFVTL--SCPDE---EVKDRGSEL-----CALINEG 594

Query: 870 VARNNTNDQYQTLVDPVSKTYETHSECSIEFEVDGPYKAMILPA--SKEEGILIKKRYAV 927
           + +     ++  L            +  +E E +  Y    +P    +EEG   KKRYA 
Sbjct: 595 LKK--WCKEFAGL------------DSYLELEFETLYTRFYMPTIRGQEEG--SKKRYAG 638

Query: 928 FNDDGTLAELKGFEIKRRGELKLIKVFQAELFD 960
             D   +   KG E  R     L K FQ ELFD
Sbjct: 639 ITDGKMI--FKGLEAVRSDWTPLAKRFQKELFD 669


>gi|324120704|dbj|BAJ78743.1| DNA polymerase delta catalytic subunit [Phraortes illepidus]
          Length = 1093

 Score = 53.1 bits (126), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 51/186 (27%), Positives = 80/186 (43%), Gaps = 29/186 (15%)

Query: 195 EYDVPYHIRFAIDND-VRC-------GQWYDVSISSTGPLLEKRVDLL------------ 234
           E ++ + IRF +D D V C       G+WY    +      +  VD+             
Sbjct: 237 ETNIDFDIRFMVDADLVGCSWVELPVGKWYLRGHNEHVSRCQLEVDVSWELMISHPPEGE 296

Query: 235 --QRAEVHVCAFDIETTKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEY 292
             + A   + +FDIE       FP+ ++D ++ I+ M+  QG    N E     +  L  
Sbjct: 297 WSKVAPFRILSFDIECAGRKGVFPEPEHDPVIQIASMMLCQG----NHEPSIRTVFTLN- 351

Query: 293 TPKPEFEGYFKVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFK 352
           +  P      +V + N+E E+L+ W   ++EV P I   YN + FD P+L  RA H   K
Sbjct: 352 SCAPIVGS--QVISFNSENEMLKTWADFVREVDPDIITGYNINNFDIPYLINRAKHLKVK 409

Query: 353 MSEELG 358
               LG
Sbjct: 410 NFTYLG 415


>gi|324120682|dbj|BAJ78732.1| DNA polymerase delta catalytic subunit [Metriocampa sp. 44]
          Length = 1115

 Score = 53.1 bits (126), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 37/122 (30%), Positives = 62/122 (50%), Gaps = 7/122 (5%)

Query: 237 AEVHVCAFDIETTKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKP 296
           A + + +FDIE       FP+A++D ++ I+ M+  QG L    E +   +  L+ T  P
Sbjct: 322 APLRILSFDIECAGRKGIFPEAEHDPVIQIASMVQIQGQL----EPMIRTVFTLD-TCAP 376

Query: 297 EFEGYFKVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEE 356
                 K  + ++E++LL  W + +++V P +   YN + FD P+L  RA H   K    
Sbjct: 377 IVGALVK--SFDSEVQLLESWASFVRQVDPDLLTGYNINNFDLPYLLNRARHLHCKHFHY 434

Query: 357 LG 358
           LG
Sbjct: 435 LG 436


>gi|388471493|ref|ZP_10145702.1| DNA polymerase II [Pseudomonas synxantha BG33R]
 gi|388008190|gb|EIK69456.1| DNA polymerase II [Pseudomonas synxantha BG33R]
          Length = 785

 Score = 53.1 bits (126), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 53/202 (26%), Positives = 84/202 (41%), Gaps = 40/202 (19%)

Query: 774 LQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDG 833
           L  A K I+N+FYG +   G R++   +A  +T  G +I++  R L+E  G         
Sbjct: 488 LSQALKIIMNAFYGVLGSSGCRFFDTRLASSITLRGHQIMRQTRELVEAQG--------- 538

Query: 834 IWCVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETH 893
            + V+ G     F                 V L    +  + N   Q LV  V+  +  H
Sbjct: 539 -YEVIYGDTDSTF-----------------VWLGSAHSPQDANRIGQALVQHVNDWWRAH 580

Query: 894 ------SECSIEFEVDGPYKAMILPASK--EEGILIKKRYA--VFNDDGTLAEL-KGFEI 942
                  + ++E + +  +   ++P  +  EEG   KKRYA  V  DDG+   + KG E 
Sbjct: 581 LSTEYGLQSALELQYETHFSRFLMPTIRGAEEG--SKKRYAGLVVRDDGSEEMVYKGLET 638

Query: 943 KRRGELKLIKVFQAELFDKFLH 964
            R     L + FQ EL+ +  H
Sbjct: 639 VRSDWSPLARQFQQELYRRIFH 660


>gi|156093327|ref|XP_001612703.1| DNA polymerase delta catalytic subunit [Plasmodium vivax Sal-1]
 gi|148801577|gb|EDL42976.1| DNA polymerase delta catalytic subunit, putative [Plasmodium vivax]
          Length = 1096

 Score = 53.1 bits (126), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 119/590 (20%), Positives = 213/590 (36%), Gaps = 128/590 (21%)

Query: 66  IDLYFVSQDG-STFKSKYKFRPYFYAATKEKMEMDVEAYLRRRYESQIADIEILEKEDLD 124
           I +Y V+ DG S   + + F PYFY       +           +  +  +E++  + L+
Sbjct: 121 IRIYTVTNDGYSVLVNVHNFFPYFYVEMPSGFD-----------QEDLQKLEVMMNDSLN 169

Query: 125 LKNHLSGLHKSYLKISFDTVQQLM----DVKKDLLHVVERNQAKFDAAEAYESILTGKRE 180
             +      +  L I     + LM    D K+D L +               ++L  K  
Sbjct: 170 ANSQYKIYDQKILHIEIVQTESLMYYKRDGKRDFLKI---------------TVLLPKMV 214

Query: 181 QRPQDFLDCIVDLR---------EYDVPYHIRFAIDNDVRCGQWY--------------- 216
              + F + IV +          E ++P+ +R+ ID  +    W                
Sbjct: 215 PSLKKFFEGIVKVNNKSIGGIVYEANLPFILRYLIDKKITGSSWLLCKKKLFHIRPRHKK 274

Query: 217 --------DVSISSTGPLLEKRVDLLQRAEVHVCAFDIETTKLPLK-FPDADYDIIMMIS 267
                   D+S     P+L +  +  Q   + V +FDIE  KL  K FP+A  D I+ IS
Sbjct: 275 VSNCSLEIDISYEHVEPMLLEG-EYQQIPRLRVLSFDIECIKLDGKGFPEAKNDPIIQIS 333

Query: 268 YMLDGQG--------YLIINRECVGEDIEDLEYTPKPEFEGYFKVTNVNNEIELLRLWFA 319
            +L  QG        ++   +EC           P         V   ++E  LL  W  
Sbjct: 334 SILYFQGDPIGKCSKFIFTLKECAS--------IPGSN------VIWFHDEKTLLDAWSE 379

Query: 320 HMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELG-----FQCDKNQGECRAKFAC 374
            +  + P     YN   FD P++  R      K  + LG         K       +F  
Sbjct: 380 FITRLDPDFLTGYNIINFDLPYILNRGTALNLKKLKMLGRIKSISSVVKESSFSSKQFGT 439

Query: 375 H------------LDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPED-----MVR 417
           H             D +  +KRD         LK+ T   + ++ L+   ED     M  
Sbjct: 440 HETKEININGRIQFDVYDLIKRD-------YKLKSYTLNYVSFEFLKEQKEDVHYSIMND 492

Query: 418 FAKEKPQM---MASYSVSDAVATYYLY--MTYVHPFIFSLATIIPMSPDEVLRKGSGTLC 472
              E P+    +A+Y + D +    L   + +++ ++  +A +       +L +G     
Sbjct: 493 LQNESPESRKRIATYCIKDGILPLRLIDKLLFIYNYV-EMARVTGTPFVYLLTRGQQIKV 551

Query: 473 EMLLMVQAYKANVICPNKH--QSDPEKFYRNHLLESETYIGGHVECLESGVFRSDLPTSF 530
              L  +  + N + P+ +      EK+    +LE     G ++E + +  F S  P+  
Sbjct: 552 TSQLYRKCKELNYVIPSTYIKSGSNEKYEGATVLEPIK--GYYIEPISTLDFASLYPSIM 609

Query: 531 KLDPSAYEQLLNNLDRDLQYAIKVEGKMDLESVSNYDEVKNAIMEKLLRL 580
                 Y  L+ N + +++  +K E    ++  SN   VK ++ + +L L
Sbjct: 610 IAHNLCYSTLVKN-NAEIE-GLKQEDVTSIQGKSNIKFVKRSVKKGILPL 657


>gi|339494847|ref|YP_004715140.1| DNA polymerase II [Pseudomonas stutzeri ATCC 17588 = LMG 11199]
 gi|338802219|gb|AEJ06051.1| DNA polymerase II [Pseudomonas stutzeri ATCC 17588 = LMG 11199]
          Length = 797

 Score = 53.1 bits (126), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 56/198 (28%), Positives = 87/198 (43%), Gaps = 32/198 (16%)

Query: 774 LQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGK-PLELDTD 832
           L  A K I+N+FYG +   G R++   +A  +T  G +I++  R LIE  G   +  DTD
Sbjct: 500 LSQALKIIMNAFYGVLGSSGCRFFDPRLASSITLRGHEIMRRTRELIEAQGHVVIYGDTD 559

Query: 833 GIWCVLPGSFPENFTFKT-KDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYE 891
             +  L  +  +    +  +DL +++           D  R +  D+Y  L   +   YE
Sbjct: 560 STFVWLGRAHSDEAAERIGRDLVQRIN----------DWWRRHLRDEY-GLSSALELQYE 608

Query: 892 THSECSIEFEVDGPYKAMILPA--SKEEGILIKKRYA--VFNDDGTLAEL-KGFEIKRRG 946
           TH            ++  ++P     EEG   KKRYA  V   DG+   + KG E  R  
Sbjct: 609 TH------------FRRFLMPTIRGAEEG--SKKRYAGLVTRADGSDGMVFKGLETVRTD 654

Query: 947 ELKLIKVFQAELFDKFLH 964
              L + FQ EL+ +  H
Sbjct: 655 WSPLAQRFQQELYLRIFH 672


>gi|392538691|ref|ZP_10285828.1| DNA polymerase II [Pseudoalteromonas marina mano4]
          Length = 786

 Score = 52.8 bits (125), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 49/193 (25%), Positives = 82/193 (42%), Gaps = 25/193 (12%)

Query: 774 LQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIG-KPLELDTD 832
           L  A K I+NS YG +  KG R+Y   ++  +T  G +I+Q  R  +E++G   +  DTD
Sbjct: 489 LSQAIKIIMNSLYGVLGSKGCRFYDPRLSSSITLRGHEIMQTTRKWMEELGYSVIYGDTD 548

Query: 833 GIWCVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYET 892
            I+                 +K   +++  C     +    + N Q++     ++K +  
Sbjct: 549 SIF-----------------VKVDESLTAQCCNKIGNELMTHINHQWER---HIAKHFNL 588

Query: 893 HSECSIEFEVDGPYKAMILPASKEEGILIKKRYA--VFNDDGTLAELKGFEIKRRGELKL 950
            S   IEFE    Y    +P  +++    KKRY   +   D +    KG E  R    + 
Sbjct: 589 KSYLEIEFETH--YSPFFMPTIRDKKTGSKKRYVGKIAKGDESKIVFKGMETVRSDWTEF 646

Query: 951 IKVFQAELFDKFL 963
            + FQ ELF+   
Sbjct: 647 AQEFQKELFEALF 659


>gi|146283123|ref|YP_001173276.1| DNA polymerase II [Pseudomonas stutzeri A1501]
 gi|145571328|gb|ABP80434.1| DNA polymerase II [Pseudomonas stutzeri A1501]
          Length = 786

 Score = 52.8 bits (125), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 55/198 (27%), Positives = 87/198 (43%), Gaps = 32/198 (16%)

Query: 774 LQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGK-PLELDTD 832
           L  A K I+N+FYG +   G R++   +A  +T  G +I++  R LIE  G   +  DTD
Sbjct: 489 LSQALKIIMNAFYGVLGSSGCRFFDPRLASSITLRGHEIMRRTRELIEAQGHVVIYGDTD 548

Query: 833 GIWCVLPGSFPENFTFKT-KDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYE 891
             +  L  +  +    +  +DL +++           D  R +  ++Y  L   +   YE
Sbjct: 549 STFVWLGRAHSDEAAERIGRDLVQRIN----------DWWRGHLRNEY-GLSSALELQYE 597

Query: 892 THSECSIEFEVDGPYKAMILPA--SKEEGILIKKRYA--VFNDDGTLAEL-KGFEIKRRG 946
           TH            ++  ++P     EEG   KKRYA  V   DG+   + KG E  R  
Sbjct: 598 TH------------FRRFLMPTIRGAEEG--SKKRYAGLVTRADGSDGMVFKGLETVRTD 643

Query: 947 ELKLIKVFQAELFDKFLH 964
              L + FQ EL+ +  H
Sbjct: 644 WSPLAQRFQQELYQRIFH 661


>gi|153831198|ref|ZP_01983865.1| DNA polymerase II [Vibrio cholerae 623-39]
 gi|148873321|gb|EDL71456.1| DNA polymerase II [Vibrio cholerae 623-39]
          Length = 787

 Score = 52.8 bits (125), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 50/191 (26%), Positives = 81/191 (42%), Gaps = 25/191 (13%)

Query: 777 AHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIG-KPLELDTDGIW 835
           A K I+NSFYG +   G R++   +A  +T  G +I+   + LIE  G + +  DTD  +
Sbjct: 494 AIKIIMNSFYGVLGSSGCRFFDARLASSITMRGHEIMIQTKQLIEARGYQVIYGDTDSTF 553

Query: 836 CVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSE 895
             L G + +    +  D              N+  A     +Q+ T  + + + Y   S 
Sbjct: 554 VALGGQYSQ----QEAD--------------NIGHALVREINQWWT--EHLKQEYALTSI 593

Query: 896 CSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAEL--KGFEIKRRGELKLIKV 953
             +E+E    Y+  ++P  +      KKRYA    D    +L  KG E  R     L + 
Sbjct: 594 LELEYETH--YRRFLMPTIRGSETGSKKRYAGLKGDSDNEQLIFKGLESARTDWTPLAQR 651

Query: 954 FQAELFDKFLH 964
           FQ +L+    H
Sbjct: 652 FQHQLYQLIFH 662


>gi|407689014|ref|YP_006804187.1| DNA polymerase II [Alteromonas macleodii str. 'Balearic Sea AD45']
 gi|407292394|gb|AFT96706.1| DNA polymerase II [Alteromonas macleodii str. 'Balearic Sea AD45']
          Length = 767

 Score = 52.8 bits (125), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 65/272 (23%), Positives = 105/272 (38%), Gaps = 44/272 (16%)

Query: 777  AHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLEL-DTDGIW 835
            A K ++NSFYG +   G  +Y   +A  +T  G +I+Q     IE++G  +   DTD  +
Sbjct: 478  AIKILMNSFYGVLGSGGCPFYDPRLASSITLRGHEIMQTTAGWIEELGYTVIYGDTDSTF 537

Query: 836  CVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSE 895
              + G+       +T                 +++A +  N ++  L+       E   E
Sbjct: 538  VHVEGNDALGSPSET----------------GLELA-SIINRKWTELLKG-----EFDIE 575

Query: 896  CSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQ 955
            C +E E +  +    +P  +      KKRYA     G     KG E  R     L K FQ
Sbjct: 576  CHLEIEFESHFSTFFMPTIRGSSEGSKKRYAGMK--GGELVFKGLENVRSDWTVLAKTFQ 633

Query: 956  AELFDKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLADY 1015
             EL+ K   G  +E+  ++  A               I   E+   +     + K L+ Y
Sbjct: 634  YELYKKVFTGQPVEDYINSTIAA--------------IKSGEMDHALVYKKRLRKPLSSY 679

Query: 1016 GEQKSCAVTTARRLSDFLGDTMVKDKGLRCQY 1047
             +     V  AR     L D   K++GL  +Y
Sbjct: 680  TKSLPPHVKAAR-----LADEYYKEQGLPLRY 706


>gi|294890731|ref|XP_002773286.1| DNA polymerase delta catalytic subunit, putative [Perkinsus marinus
           ATCC 50983]
 gi|239878338|gb|EER05102.1| DNA polymerase delta catalytic subunit, putative [Perkinsus marinus
           ATCC 50983]
          Length = 664

 Score = 52.8 bits (125), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 76/324 (23%), Positives = 124/324 (38%), Gaps = 76/324 (23%)

Query: 66  IDLYFVSQDGSTFKSK-YKFRPYFYAATK------EKMEMDVEAYLR-------RRYESQ 111
           I ++ V+  G++     + F PYFY          E+ +  +E+ LR        R +  
Sbjct: 67  IRMFGVTATGNSLMCHIHGFLPYFYCPRPDQTVDCERFQTRLESALRGSQTASGSRCKQL 126

Query: 112 IADIEILEKEDLDLKNHLSGLHKSYLKISFDTVQQLMDVKKDLLHVVERNQAKFDAAEAY 171
           +  +EI+ +E+L   N  +G          DT  +   V   L   +  ++      E  
Sbjct: 127 VTSVEIVVRENL---NGWTGR---------DTASEYFRVTVALPKFISTSRGVL---ERG 171

Query: 172 ESILTGKREQRPQDFLDCIVDLREYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLLEK-R 230
             +L G        F        E ++PY +RF IDND+  G W ++   S  P  +  R
Sbjct: 172 IPVLQGDALWNCTTF--------ETNIPYPLRFMIDNDIGGGSWVELPAGSYTPRTDSDR 223

Query: 231 V----------------------DLLQRAEVHVCAFDIETTKLPLK-FPDADY-DIIMMI 266
           V                      D +  A + V +FDIE      K FP  D   +I + 
Sbjct: 224 VSTCQIEVDVQDYRQIIGHMAEGDWMALAPLRVVSFDIECVSEHGKGFPTPDVAPVIQIA 283

Query: 267 SYMLDG--QGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNVNNEIELLRLWFAHMQEV 324
           + M +G  Q + ++       DI D              V +  +E +LL  +  +M  V
Sbjct: 284 AVMQEGTEQKHKVVWTLDTCADIADA------------TVVSFQSEKDLLSSFQQYMVLV 331

Query: 325 KPGIYVTYNGDYFDWPFLETRAAH 348
            P +   YN   FD+P+L  R+AH
Sbjct: 332 DPDVVTGYNIINFDFPYLLDRSAH 355


>gi|399521854|ref|ZP_10762520.1| K02336 DNA polymerase II [Pseudomonas pseudoalcaligenes CECT 5344]
 gi|399110346|emb|CCH39080.1| K02336 DNA polymerase II [Pseudomonas pseudoalcaligenes CECT 5344]
          Length = 861

 Score = 52.8 bits (125), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 67/256 (26%), Positives = 101/256 (39%), Gaps = 51/256 (19%)

Query: 727 TVRSFRDRRYEYKG------LNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHKC 780
           +V  FR  R+          + +VW+G+   AK  GN+              +L  A K 
Sbjct: 526 SVEGFRGARFSRTRHCLPAIVERVWQGR-EAAKREGNA--------------ALSQALKI 570

Query: 781 ILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKP-LELDTDGIWCVLP 839
           I+N+FYG +   G R++   +A  +T  G +I++  R LIE  G   +  DTD  +  L 
Sbjct: 571 IMNAFYGVLGSSGCRFFDPRLASSITLRGHQIMKRTRELIEAEGHAVIYGDTDSTFVWLG 630

Query: 840 GSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIE 899
                    +  D  +   I    V       R +  ++Y  L   +   +ETH      
Sbjct: 631 ---------RAHDEDEAARIGRALVARVNAWWREHLQNEY-GLTSALELQFETH------ 674

Query: 900 FEVDGPYKAMILPA--SKEEGILIKKRYA--VFNDDGT-LAELKGFEIKRRGELKLIKVF 954
                 Y+  ++P     EEG   KKRYA  V   DG+     KG E  R     L + F
Sbjct: 675 ------YRRFLMPTIRGTEEG--SKKRYAGLVRAADGSERMVFKGLETVRTDWSPLAQRF 726

Query: 955 QAELFDKFLHGSTIEE 970
           Q EL+     G   E+
Sbjct: 727 QQELYRLVFAGQPYED 742


>gi|449548212|gb|EMD39179.1| hypothetical protein CERSUDRAFT_112852 [Ceriporiopsis subvermispora
            B]
          Length = 1462

 Score = 52.8 bits (125), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 66/266 (24%), Positives = 114/266 (42%), Gaps = 58/266 (21%)

Query: 762  QEAQDMVVLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIE 821
            +  Q  ++ +D  Q+A K   NS YG +  + +R+Y+  +A + T+ G +I+ + R L E
Sbjct: 948  KATQAQLMQWDIKQIALKLTANSMYGCLGFEYSRFYARPLAALTTFKGREILTHTRELAE 1007

Query: 822  KIGKPLEL---DTDGIWCVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQ 878
             +   L++   DTD ++         N T    DL + L IS           +   ND+
Sbjct: 1008 SLQ--LDVVYGDTDSVFVN------SNVT----DLAEALKISSDL--------KKAVNDR 1047

Query: 879  YQTLVDPVSKTYETHSECSIEFEVDGPYKAMILPASKEEGILIKKRYA---VFNDDGTLA 935
            Y+ L                E ++DG ++ ++L        L KK+YA   V  D  T  
Sbjct: 1048 YKLL----------------EIDLDGIFQRLLL--------LQKKKYAAVKVEQDGKTST 1083

Query: 936  ELKGFEIKRRGELKLIKVFQAELFDKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIAD 995
            E+KG ++KRR    L K     + ++ L G   E        V  R  + L   G+D+  
Sbjct: 1084 EVKGLDMKRREYCALSKAASQYILEQILSGEATE-------TVVERIHEYLMTLGEDVRA 1136

Query: 996  SEL-IDYISESSTMSKSLADYGEQKS 1020
             ++ +D       + K+  DY + K+
Sbjct: 1137 GKIKLDEFIIFKRLGKNPEDYPDAKN 1162


>gi|452748260|ref|ZP_21948041.1| DNA polymerase II [Pseudomonas stutzeri NF13]
 gi|452007841|gb|EME00093.1| DNA polymerase II [Pseudomonas stutzeri NF13]
          Length = 788

 Score = 52.8 bits (125), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 75/321 (23%), Positives = 117/321 (36%), Gaps = 71/321 (22%)

Query: 727  TVRSFRDRRYEYKG------LNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHKC 780
            ++ SFR  R+          + +VW+G+   AK   N                L  A K 
Sbjct: 453  SIPSFRGARFSRTRHCLPAIVERVWEGR-ETAKREHNK--------------PLSQALKI 497

Query: 781  ILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLPG 840
            I+N+FYG +   G R++   +A  +T  G +I++  R LIE  G            V+ G
Sbjct: 498  IMNAFYGVLGSSGCRFFDTRLASSITLRGHEIMRRTRELIEAQGH----------AVIYG 547

Query: 841  SFPENFTFKTKDLKKKLTISYPCVMLN--VDVARNNTNDQYQTLVDPVSKTYETHSECSI 898
                 F +  K           C ++    D  R +   +Y  LV  +   YETH     
Sbjct: 548  DTDSTFVWLRKAHSDDEAALIGCQLVQHINDWWRVHLQAEY-GLVSALELQYETH----- 601

Query: 899  EFEVDGPYKAMILPA--SKEEGILIKKRYAVF-----NDDGTLAELKGFEIKRRGELKLI 951
                   ++  ++P   + EEG   KKRYA         DG +   KG E  R     L 
Sbjct: 602  -------FRRFLMPTIRAAEEG--SKKRYAGLVTLPDGSDGMV--FKGLETVRTDWSPLA 650

Query: 952  KVFQAELFDKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKS 1011
            + FQ EL+ +  H    +              D + +  +     EL + +     + + 
Sbjct: 651  QRFQQELYQRIFHRQPYQ--------------DYVRDYVRRTLAGELDELLVFRKRLRRR 696

Query: 1012 LADYGEQKSCAVTTARRLSDF 1032
            LADY       V  AR   D+
Sbjct: 697  LADYQRNVPPHVRAARLADDY 717


>gi|396485292|ref|XP_003842135.1| similar to catalytic subunit DNA polymerase delta [Leptosphaeria
           maculans JN3]
 gi|312218711|emb|CBX98656.1| similar to catalytic subunit DNA polymerase delta [Leptosphaeria
           maculans JN3]
          Length = 1115

 Score = 52.8 bits (125), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 75/322 (23%), Positives = 132/322 (40%), Gaps = 73/322 (22%)

Query: 66  IDLYFVSQDG-STFKSKYKFRPYFYAATKEKMEMD--------VEAYLRRR---YESQIA 113
           + L+ V++DG S       F  YFY A       D        +EA  +++   + + IA
Sbjct: 124 VKLFGVTEDGHSVLLHVTGFLHYFYVAAPMNFHKDDCQPYKTFLEAECQKQMNQHSAIIA 183

Query: 114 DIEILEKEDLDLKNHLSGLHKS-YLKISFDTVQQLMDVKKDLLHVVERNQAKFDAAEAYE 172
            +++  +E++       G  KS YLKI+ +  + +  V+     +V++  A +       
Sbjct: 184 SVQMTMRENI---LRFQGNQKSPYLKITVNDPKHIGRVRT----LVQKGFANY------- 229

Query: 173 SILTGKREQRPQDFLDCIVDLREYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLLEKR-- 230
                KR     D      D    ++ Y +RF ID  V    W +V  +    ++E+R  
Sbjct: 230 -----KRLWPASDGGILTFD----NIAYVLRFMIDTKVAGMSWVEVP-AGKYRMIEQRDR 279

Query: 231 ------------VDLLQR---------AEVHVCAFDIETTKLPLKFPDADYDIIMMISYM 269
                        DL+           A + + +FDIE       FPDAD D ++ I+ +
Sbjct: 280 HSNCQIEAQMHYSDLIAHSSEGEWAKLAPLRILSFDIECAGRKGVFPDADIDPVIQIANV 339

Query: 270 LDGQGY---LIINRECVGEDIEDLEYTPKPEFEGYFKVTNVNNEIELLRLWFAHMQEVKP 326
           +   G     + N  C+ + +  +  T         +V +  +E E+L  W   ++EV P
Sbjct: 340 VTRYGEDKPFVRNVFCL-DTVSPIVAT---------QVLSYEDEGEMLMKWRDFLEEVDP 389

Query: 327 GIYVTYNGDYFDWPFLETRAAH 348
            + + YN   FD+P+L  RA H
Sbjct: 390 DVIIGYNTSNFDFPYLLDRAKH 411


>gi|77459956|ref|YP_349463.1| DNA polymerase II [Pseudomonas fluorescens Pf0-1]
 gi|77383959|gb|ABA75472.1| DNA polymerase II [Pseudomonas fluorescens Pf0-1]
          Length = 787

 Score = 52.8 bits (125), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 53/198 (26%), Positives = 83/198 (41%), Gaps = 34/198 (17%)

Query: 774 LQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPL---ELD 830
           L  A K I+N+FYG +   G R++   +A  +T  G +I+   R LIE  G  +   + D
Sbjct: 490 LSQALKIIMNAFYGVLGSSGCRFFDTRLASSITLRGHEIMLRTRQLIEAQGHAVIYGDTD 549

Query: 831 TDGIWCVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTY 890
           +  +W   P              ++   I    V    D  R +  +QY           
Sbjct: 550 STFVWLRRP-----------HGQEEAAQIGRALVQHVNDWWREHVREQYGL--------- 589

Query: 891 ETHSECSIEFEVDGPYKAMILPASK--EEGILIKKRYA--VFNDDGTLAEL-KGFEIKRR 945
               E ++E + +  YK  ++P  +  EEG   KKRYA  V   DG+   + KG E  R 
Sbjct: 590 ----ESALELQFETHYKRFLMPTIRGAEEG--SKKRYAGLVTRADGSEEMVYKGLETVRT 643

Query: 946 GELKLIKVFQAELFDKFL 963
               L + FQ EL+++  
Sbjct: 644 DWSLLARQFQQELYERIF 661


>gi|54308724|ref|YP_129744.1| DNA polymerase II [Photobacterium profundum SS9]
 gi|46913153|emb|CAG19942.1| putative DNA polymerase II [Photobacterium profundum SS9]
          Length = 769

 Score = 52.8 bits (125), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 50/197 (25%), Positives = 81/197 (41%), Gaps = 25/197 (12%)

Query: 777 AHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIG-KPLELDTDGIW 835
           A K I+NSFYG +   G R++   +A  +T  G +++   + LIE  G   +  DTD ++
Sbjct: 476 AIKIIMNSFYGVLGSSGCRFFDHRLASSITMRGHEVLSVTKDLIEDNGYNVIYGDTDSVF 535

Query: 836 CVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSE 895
             L  S  +    +   +  +L  S     +N +  R   +D               + E
Sbjct: 536 VSLGKSHTQE---EADIVGNQLVKS-----INAEWIRRLKDD--------------FNLE 573

Query: 896 CSIEFEVDGPYKAMILPASKEEGILIKKRYA--VFNDDGTLAELKGFEIKRRGELKLIKV 953
           C +E E +  Y   ++P  +      KKRYA  +  D       KG E  R     L + 
Sbjct: 574 CYLELEYETHYHKFLMPTIRGSETGSKKRYAGLIIQDGKEKLIFKGLETVRTDWTPLAQE 633

Query: 954 FQAELFDKFLHGSTIEE 970
           FQ  L++   HG   +E
Sbjct: 634 FQQTLYEMVFHGQDPDE 650


>gi|385773538|ref|YP_005646104.1| DNA polymerase B region [Sulfolobus islandicus HVE10/4]
 gi|323477652|gb|ADX82890.1| DNA polymerase B region [Sulfolobus islandicus HVE10/4]
          Length = 883

 Score = 52.8 bits (125), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 78/315 (24%), Positives = 128/315 (40%), Gaps = 40/315 (12%)

Query: 225 PLLEKRVDLLQRAEVHVCAFDIET-TKLPLKFPDADYDIIMMISYMLDG----QGYLIIN 279
           P+ E  +  ++R      A DIE  T +  + PD+      +IS  L G    +  L++N
Sbjct: 216 PIFETEIPKIKR-----VAIDIEVYTPVKGRIPDSQKAEFPIISIALAGSDGLRKVLVLN 270

Query: 280 RECVGEDIEDLEYTPKPEFEGYFKVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDW 339
           R  V E    LE            V   N E ELL  +FA + E    + +T+NGD FD 
Sbjct: 271 RNDVNEGNVKLEG---------ISVERFNTEYELLERFFAILLEYP--VVLTFNGDDFDL 319

Query: 340 PFLETRAAHHGFKMSEELGFQ-CDKNQGECRAKFACHLDCFAWVKRDSYLPQGSQG---- 394
           P++  RA   G+   EE+      K++G+  A    H+D + +    +      +G    
Sbjct: 320 PYIYFRALKLGY-FPEEIPIDVASKDEGKYLA--GLHIDLYKFFFNKAVRNYAFEGKYNE 376

Query: 395 --LKAVTKAKLGYDPLEVNPEDMVRFAKEKPQMMASYSVSDAVATYYLYM---TYVHPFI 449
             L AV KA LG   ++V  + ++ F     + +  Y+  DA  T  L           I
Sbjct: 377 YNLDAVAKALLGISKVKV--DTLISFLDV--EKLIEYNFRDAEITLQLTTFNNDLTMKLI 432

Query: 450 FSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVICPNKHQ--SDPEKFYRNHLLESE 507
              + I  +  +E+ R    T  + L   +  K N + P K +  +         L++ +
Sbjct: 433 ILFSRISRLGIEELTRTEISTWVKNLYYWEHRKRNWLIPLKEEILAKSSNIRTAALIKGK 492

Query: 508 TYIGGHVECLESGVF 522
            Y G  V    +G+F
Sbjct: 493 GYKGAVVIDPPAGIF 507


>gi|385776163|ref|YP_005648731.1| DNA polymerase B region [Sulfolobus islandicus REY15A]
 gi|323474911|gb|ADX85517.1| DNA polymerase B region [Sulfolobus islandicus REY15A]
          Length = 883

 Score = 52.8 bits (125), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 78/315 (24%), Positives = 128/315 (40%), Gaps = 40/315 (12%)

Query: 225 PLLEKRVDLLQRAEVHVCAFDIET-TKLPLKFPDADYDIIMMISYMLDG----QGYLIIN 279
           P+ E  +  ++R      A DIE  T +  + PD+      +IS  L G    +  L++N
Sbjct: 216 PIFETEIPKIKR-----VAIDIEVYTPVKGRIPDSQKAEFPIISIALAGSDGLRKVLVLN 270

Query: 280 RECVGEDIEDLEYTPKPEFEGYFKVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDW 339
           R  V E    LE            V   N E ELL  +FA + E    + +T+NGD FD 
Sbjct: 271 RNDVNEGNVKLEG---------ISVERFNTEYELLERFFAILLEYP--VVLTFNGDDFDL 319

Query: 340 PFLETRAAHHGFKMSEELGFQ-CDKNQGECRAKFACHLDCFAWVKRDSYLPQGSQG---- 394
           P++  RA   G+   EE+      K++G+  A    H+D + +    +      +G    
Sbjct: 320 PYIYFRALKLGY-FPEEIPIDVASKDEGKYLA--GLHIDLYKFFFNKAVRNYAFEGKYNE 376

Query: 395 --LKAVTKAKLGYDPLEVNPEDMVRFAKEKPQMMASYSVSDAVATYYLYM---TYVHPFI 449
             L AV KA LG   ++V  + ++ F     + +  Y+  DA  T  L           I
Sbjct: 377 YNLDAVAKALLGISKVKV--DTLISFLDV--EKLIEYNFRDAEITLQLTTFNNDLTMKLI 432

Query: 450 FSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVICPNKHQ--SDPEKFYRNHLLESE 507
              + I  +  +E+ R    T  + L   +  K N + P K +  +         L++ +
Sbjct: 433 ILFSRISRLGIEELTRTEISTWVKNLYYWEHRKRNWLIPLKEEILAKSSNIRTAALIKGK 492

Query: 508 TYIGGHVECLESGVF 522
            Y G  V    +G+F
Sbjct: 493 GYKGAVVIDPPAGIF 507


>gi|145218828|ref|YP_001129537.1| DNA polymerase B region [Chlorobium phaeovibrioides DSM 265]
 gi|145204992|gb|ABP36035.1| DNA polymerase B region [Chlorobium phaeovibrioides DSM 265]
          Length = 805

 Score = 52.8 bits (125), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 90/381 (23%), Positives = 140/381 (36%), Gaps = 89/381 (23%)

Query: 714  AGICMRENSFYVDTVRSFRDRRYEYKGLNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDS 773
            + IC R      D +R+F     + K L    KG  ++ KA+GN         +   YD+
Sbjct: 445  SNICPR-----TDELRAFPGILTDLKALRLKTKGMAADEKAAGNG-------QLSANYDA 492

Query: 774  LQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIG----KPLEL 829
            +Q + K ++N+ YGY+   G  +     A  VT TG  I   AR +I +      + +E+
Sbjct: 493  MQSSFKILINAMYGYLGFAGGIFNDFAEADRVTSTGQSI---ARQMIREFEAERCRIIEV 549

Query: 830  DTDGIWCVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKT 889
            DTDGI  + P S                                 T  Q + LV  VS  
Sbjct: 550  DTDGILFIPPDSV-------------------------------TTEAQERDLVQKVSAL 578

Query: 890  YETHSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELK 949
                    I    DG ++ MI          +KK YA+ +   T+  LKG  +  R   K
Sbjct: 579  MPE----GIRIGFDGRFRKMI--------SYMKKNYALLDYSMTMT-LKGSSLTSRSGEK 625

Query: 950  LIKVFQAELFDKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMS 1009
              +      F+K L    I+  ++      N+ L    N   DI +       S + +M 
Sbjct: 626  FGRDLVERGFEKLL-AEDIDGLHNLYTHYRNKIL----NHELDITE------FSRTESMK 674

Query: 1010 KSLADY-------GEQKSCAVTTARRLSDFLGDTMVKDKGLRCQYIVACEPQGTPVSERA 1062
             SL +Y         Q++     ARR    +       KG R  Y ++     +   +R 
Sbjct: 675  SSLEEYLGDVQAGKRQRAVTYEIARRKGGRI------TKGDRITYYISGSGTASASFDRG 728

Query: 1063 VPVAIFETDA--EIMKFYLRK 1081
                 +  DA  E   FYL++
Sbjct: 729  KAADEWRADAPDENTAFYLKR 749


>gi|452823008|gb|EME30022.1| DNA polymerase delta subunit 1 [Galdieria sulphuraria]
          Length = 1070

 Score = 52.8 bits (125), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 79/330 (23%), Positives = 131/330 (39%), Gaps = 70/330 (21%)

Query: 54  LEDEDTRKVYSCIDLYFVSQDGSTFKSK-YKFRPYFY------------AATKEKMEMDV 100
           LED  +  V   + +Y V++ G++  ++ + FRP+F+             A KE +E   
Sbjct: 81  LEDSSSAAV---LRIYGVTEGGNSVLARVHGFRPFFFIICPSQFDPADLPAIKESLEKRA 137

Query: 101 EAY--LRRRYESQIADIEILEKEDLDLKNHLSGLHKSYLKISFDTVQQLMDVKKDLLHVV 158
            A   ++      I D+EI E   L L    S     +LKI+      L    + L  ++
Sbjct: 138 RAVSSMKNCQGPIIHDLEIFEGRSL-LYFVPSDPLIRFLKITV----ALPSYVRQLAQIL 192

Query: 159 ERNQAKFDAAEAYESILTGKREQRPQDFLDCIVDLREYDVPYHIRFAIDNDVRCGQWYDV 218
           ER    F   E          E R   F        E  V + +RF I+ ++    W ++
Sbjct: 193 ERGDIDFSPYE----------ESRYSTF--------EASVDFILRFMIETNMYGCSWVEM 234

Query: 219 SISSTGPLLEKR-------VDL--------------LQRAEVHVCAFDIETTKLPLKFPD 257
             S+   L EK+       +D+              L+ A + + +FDIE    P  FP+
Sbjct: 235 P-SNRYHLPEKQTSHMQFEIDIHYTHLVCHAPHGEWLKTAPIRILSFDIECAGRPGVFPE 293

Query: 258 ADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNVNNEIELLRLW 317
            ++D ++ I+  +   G      E +   +  L         G  KV + ++E ELL  W
Sbjct: 294 PEHDQVIQIANYMTETG----KSEPIARTV--LTLGSCAPIAGA-KVLSFDSEAELLEAW 346

Query: 318 FAHMQEVKPGIYVTYNGDYFDWPFLETRAA 347
            + +    P I   YN   FD P+L  RA+
Sbjct: 347 VSFLCATDPDILTGYNIVNFDLPYLLNRAS 376


>gi|345482887|ref|XP_001603716.2| PREDICTED: DNA polymerase alpha catalytic subunit-like [Nasonia
            vitripennis]
          Length = 1528

 Score = 52.8 bits (125), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 68/282 (24%), Positives = 122/282 (43%), Gaps = 61/282 (21%)

Query: 764  AQDMVVLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKI 823
            + ++ V Y+  QLA K   NS YG +     R+Y+  +A +VT  G +I+QN++ L+EK 
Sbjct: 982  SPELKVQYNIRQLALKLTANSMYGCLGATHCRFYAKGLAALVTMKGREILQNSKALVEKA 1041

Query: 824  G-KPLELDTDGIWCVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVAR-NNTNDQYQT 881
              + +  DTD I                              M+N ++   +      + 
Sbjct: 1042 NYEVIYGDTDSI------------------------------MINTNILEYDQVFSIGKE 1071

Query: 882  LVDPVSKTYETHSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVF----NDDGTL--- 934
            +   V+KTY+      +E ++DG ++ ++L        L KK+YA      +  G +   
Sbjct: 1072 IKKDVNKTYK-----KVELDIDGVFRYLLL--------LQKKKYAAVTMSKSPSGQMQYT 1118

Query: 935  AELKGFEIKRRGELKLIKVFQAELFDKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIA 994
             ELKG +I RR    L      ++ D+ L   + E   S V  +     D+L   G ++ 
Sbjct: 1119 KELKGLDIVRRDWCGLACDIGNQILDQLLSDQSSE---SRVGKI----FDILQQVGNNLR 1171

Query: 995  DSEL-IDYISESSTMSKSLADY-GEQKSCAVTTARRLSDFLG 1034
            +  L +  +  +  +SK+  +Y  ++K   V  A RL++  G
Sbjct: 1172 EGNLPLSLLVITKQLSKNPHEYPNDKKLSHVLVALRLNESGG 1213


>gi|410621563|ref|ZP_11332409.1| DNA polymerase II [Glaciecola pallidula DSM 14239 = ACAM 615]
 gi|410158801|dbj|GAC27783.1| DNA polymerase II [Glaciecola pallidula DSM 14239 = ACAM 615]
          Length = 783

 Score = 52.8 bits (125), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 51/204 (25%), Positives = 81/204 (39%), Gaps = 25/204 (12%)

Query: 777 AHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIG-KPLELDTDGIW 835
           A K ++NSFYG +   G  +Y   +A  +T  G  I+Q     IE+ G + +  DTD  +
Sbjct: 490 AIKILMNSFYGVLGSGGCPFYDTRLASSITLRGHDIMQTTAKWIEQAGYQVIYGDTDSTF 549

Query: 836 CVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSE 895
             L G +      +   + + L      +M+N            Q   D +   ++   E
Sbjct: 550 VWLEGQYSNQ---QANQIGQSL-----ALMIN------------QKWQDNIKLKHQLPCE 589

Query: 896 CSIEFEVDGPYKAMILPASKEEGILIKKRYAVF--NDDGTLAELKGFEIKRRGELKLIKV 953
             IEFE    +   ++P  +   +  KKRYA      +G     KG E  R    +L K 
Sbjct: 590 LEIEFETH--FSQFLMPTIRGSELGSKKRYAGLKTTKEGDELVFKGLETVRSDWTQLAKG 647

Query: 954 FQAELFDKFLHGSTIEECYSAVAA 977
           FQ  L+     G  I +    + A
Sbjct: 648 FQLTLYKMVFAGQNINDYLLQIIA 671


>gi|328770280|gb|EGF80322.1| hypothetical protein BATDEDRAFT_16581 [Batrachochytrium
           dendrobatidis JAM81]
          Length = 1125

 Score = 52.4 bits (124), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 50/197 (25%), Positives = 78/197 (39%), Gaps = 51/197 (25%)

Query: 195 EYDVPYHIRFAIDNDVRCGQWYDV-----SI---SSTGPLLEKRVDLLQR---------- 236
           E ++PY +RF ID  ++   W ++     SI     T    +  VD++ +          
Sbjct: 256 ESNIPYPLRFMIDLSIQGASWVELPKKCYSIRRRDDTTSNCQIEVDIVAQHIVSYQPEGD 315

Query: 237 ----AEVHVCAFDIETTKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEY 292
               A + + +FDIE       FP+A  D ++ I+ M+  QG                  
Sbjct: 316 WSKIAPLRILSFDIECAGRRGIFPEAQIDPVIQIANMVALQG------------------ 357

Query: 293 TPKPEFEGYFK-----------VTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPF 341
             KP     F            V +  +E E+L+ W   +QEV P I + YN + FD+P+
Sbjct: 358 DTKPFVRNIFTLNTCSSIIGTHVMSFQSESEMLQGWSDFIQEVDPDIIIGYNINGFDFPY 417

Query: 342 LETRAAHHGFKMSEELG 358
           L  RA   G      LG
Sbjct: 418 LLDRADTLGLDNFAFLG 434


>gi|119355877|ref|YP_910521.1| DNA polymerase B region [Chlorobium phaeobacteroides DSM 266]
 gi|119353226|gb|ABL64097.1| DNA polymerase B region [Chlorobium phaeobacteroides DSM 266]
          Length = 796

 Score = 52.4 bits (124), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 82/344 (23%), Positives = 134/344 (38%), Gaps = 81/344 (23%)

Query: 715  GICMRENSFYV--DTVRSFRDRRYEYKGLNKVWKGKLSEAKASGNSIKIQEAQDMVVLYD 772
            GIC + +   V    + + +D R++ K L+        E K  GN   +Q A +    +D
Sbjct: 439  GICPKTDDLRVFPSVLGNLKDLRFKTKKLS-------GEEKQKGN---LQMADN----FD 484

Query: 773  SLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIG-KPLELDT 831
            ++Q + K ++N+ YGY+      +   + A  VT TG  I +      E  G K +E+DT
Sbjct: 485  AMQGSFKILINAMYGYLGFNNGIFNDFDEADKVTTTGQGIAKKMIHEFEARGCKVIEVDT 544

Query: 832  DGIWCVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYE 891
            DGI  V P                      P ++         T ++ +TLV  VS    
Sbjct: 545  DGILFVPP----------------------PGIV---------TENEERTLVREVSSLMP 573

Query: 892  THSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLI 951
                  I    DG YK MI          +KK YA+ +DD  +  +KG  +  R   K  
Sbjct: 574  E----GINIGYDGRYKKMI--------SYMKKNYALLDDDNVMI-VKGSSLTSRSSEKFG 620

Query: 952  KVFQAELFDKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKS 1011
            + F    F+K L      E  + +  +   + + +     DI D       S + T+  +
Sbjct: 621  RDFVKRGFEKLL-----SEDIAGLHDLYTEYKEKILAHALDIGD------FSRTETLKST 669

Query: 1012 LADYGEQKSCAVTTARRLSDFLGDTMVKD-----KGLRCQYIVA 1050
            +  Y E     V + RR      +  +K+     KG R  Y ++
Sbjct: 670  MEQYLED----VRSGRRSKSVTYEIALKNGKQVTKGERITYYIS 709


>gi|358375619|dbj|GAA92199.1| DNA polymerase delta large chain [Aspergillus kawachii IFO 4308]
          Length = 1105

 Score = 52.4 bits (124), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 90/416 (21%), Positives = 156/416 (37%), Gaps = 71/416 (17%)

Query: 198 VPYHIRFAIDNDVRCGQWYDVSISS----------TGPLLEKRVDL------------LQ 235
           + Y +RF ID D+    W +               +   +E  VD              +
Sbjct: 245 IQYLLRFMIDTDISGMSWVEAKAGKYRLFQQHEKVSNCQIEASVDYRDLISHPPNGEWAK 304

Query: 236 RAEVHVCAFDIETTKLPLKFPDADYDIIMMISYMLD--GQGYLIINRECVGEDIEDLEYT 293
            A + + +FDIE       FP+ ++D ++ I+ ++   G+    I    V +    +  T
Sbjct: 305 MAPLRILSFDIECAGRKGIFPEPNHDPVIQIANVVTRYGESKPFIRNVFVLDTCSLIVNT 364

Query: 294 PKPEFEGYFKVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAH---HG 350
              EF+         +E ++L  W   +Q+V P + + YN   FD+P+L  RA H    G
Sbjct: 365 QILEFK---------DEAKMLMAWRDFVQKVDPDVIIGYNIANFDFPYLLDRAKHLKCTG 415

Query: 351 F----------KMSEELGFQC----DKNQGECRAKFACHLDCFAWVKRDSYLPQGSQGLK 396
           F            S+E  F      +++           LD    V+RD +L   S  L 
Sbjct: 416 FPYWTRLNGVQSQSKETNFSSKQMGNRDTKSTNTNGRIQLDMLQLVQRDYHL--RSYTLN 473

Query: 397 AVTKAKLGYDPLEVNPEDMVRFAKEKP---QMMASYSVSDAVATYYLY---MTYVHPFIF 450
           +V+   LG    +V+   +       P   + +A Y + DA     L    M  V+    
Sbjct: 474 SVSYEFLGEQKEDVHHTMITELYNGTPDSRRRLAVYCLKDAYLPQRLMDKLMCLVNYTEM 533

Query: 451 SLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVICPNKHQSDPEKFYRNHLLES-ETY 509
           +  T +P   + +L +G        L  +A +  ++ PN   +D + +    ++E    Y
Sbjct: 534 ARVTGVPF--NFLLSRGQQVKFISQLFRKALEQQLVIPNTKSNDEQDYEGATVIEPVRGY 591

Query: 510 IGGHVECLESGVFRSDLPTSFKLDPSAYEQLLN-------NLDRDLQYAIKVEGKM 558
            G  +  L+   F S  P+  +     Y  LLN        L +D  Y +   G M
Sbjct: 592 YGVPIATLD---FASLYPSIIQAHNLCYTTLLNKNSVERLKLVKDEDYIVTPNGDM 644


>gi|261252639|ref|ZP_05945212.1| DNA polymerase II [Vibrio orientalis CIP 102891 = ATCC 33934]
 gi|417952576|ref|ZP_12595634.1| DNA polymerase II [Vibrio orientalis CIP 102891 = ATCC 33934]
 gi|260936030|gb|EEX92019.1| DNA polymerase II [Vibrio orientalis CIP 102891 = ATCC 33934]
 gi|342818802|gb|EGU53653.1| DNA polymerase II [Vibrio orientalis CIP 102891 = ATCC 33934]
          Length = 787

 Score = 52.4 bits (124), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 50/197 (25%), Positives = 83/197 (42%), Gaps = 25/197 (12%)

Query: 777 AHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIG-KPLELDTDGIW 835
           A K I+NSFYG +   G R++   +A  +T  G +I++  + LIE  G + +  DTD  +
Sbjct: 494 AIKIIMNSFYGVLGSSGCRFFDTRLASSITMRGHEIMKQTKKLIEDKGYQVIYGDTDSTF 553

Query: 836 CVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSE 895
             L G + +    +  ++  +L            VA  NT          + + Y  +S 
Sbjct: 554 VSLNGEYSQQ---QADEIGHEL------------VAYINT-----WWTKHLREEYNLNSI 593

Query: 896 CSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAEL--KGFEIKRRGELKLIKV 953
             +E+E    Y+  ++P  + +    KKRYA    +G    +  KG E  R     L + 
Sbjct: 594 LELEYETH--YRKFLMPTIRGQETGSKKRYAGLIGEGANERIIFKGLESARTDWTPLAQE 651

Query: 954 FQAELFDKFLHGSTIEE 970
           FQ  L+     G    E
Sbjct: 652 FQQSLYSMVFKGQNPSE 668


>gi|323454621|gb|EGB10491.1| hypothetical protein AURANDRAFT_23037 [Aureococcus anophagefferens]
          Length = 1057

 Score = 52.4 bits (124), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 70/323 (21%), Positives = 121/323 (37%), Gaps = 72/323 (22%)

Query: 66  IDLYFVSQDGSTFKSK-YKFRPYFY-----------AATKEKMEMDVEAYLRRRYESQ-- 111
           + LY V+ DG++  +  + F PY +           A    K++  ++  LR+R      
Sbjct: 59  VRLYGVTGDGASVCAHCHGFTPYCFSSAPLAFDESDAGNVAKLQQALDGALRQRCSRGQD 118

Query: 112 ------IADIEILEKEDLDLKNHLSGLHKSYLKISFDTVQQLMDVKKDLLHVVERNQAKF 165
                 +  +E++  +   +     G    + KI      Q+  +KK L   V       
Sbjct: 119 RACAQLVLGVEVVRDKRSIMGYQPDGARACFFKIYVALPTQIPALKKVLQDGVNVPGVGH 178

Query: 166 DAAEAYESILTGKREQRPQDFLDCIVDLREYDVPYHIRFAIDNDVRCGQWYDVSISS--- 222
              + +ES                       +VP+ +RF IDN+++   W +    +   
Sbjct: 179 SQLQTFES-----------------------NVPFILRFMIDNEIQGCNWVEAPAGAYAA 215

Query: 223 -TGPLLEKRVDL------------------LQRAEVHVCAFDIETTKLPLKFPDADYDII 263
            +G   + R DL                   + A + + A DIE       FP+ + D +
Sbjct: 216 RSGGAKKTRCDLEIDVVFDSLVSHAPDGPWAKLAPLRIMATDIECMGRKGHFPEPEKDPV 275

Query: 264 MMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNVNNEIELLRLWFAHMQE 323
           + IS ++  QG      + + + I  L+        G   VT+   E ELL+ W A ++ 
Sbjct: 276 IQISCVVQVQGAA----QPMCQVIFTLDGC--TAINGAEVVTS-KTEPELLKKWAAFVRL 328

Query: 324 VKPGIYVTYNGDYFDWPFLETRA 346
           V P I   YN   FD P+L  RA
Sbjct: 329 VDPDIITGYNTQNFDIPYLLKRA 351


>gi|195019160|ref|XP_001984922.1| GH16758 [Drosophila grimshawi]
 gi|193898404|gb|EDV97270.1| GH16758 [Drosophila grimshawi]
          Length = 1095

 Score = 52.4 bits (124), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 67/296 (22%), Positives = 118/296 (39%), Gaps = 57/296 (19%)

Query: 88  FYAATKEKMEMDVEAYLRRRYESQIADIEILEKEDLDLKNHLSGLHKSYLKISFDTVQQL 147
            + A   K+  D+    + + +  +  +E++++  L++  +     +SY+KI+  T+ + 
Sbjct: 150 LHEALDRKVIADIRGGNKDKVQEAVLAVELVQR--LNIHGYQGDAKQSYIKITV-TLPRF 206

Query: 148 MDVKKDLLHVVERNQAKFDAAEAYESILTGKREQRPQDFLDCIVDLREYDVPYHIRFAID 207
           +     LL    +N+    A                 DF DC     E ++ + IRF ++
Sbjct: 207 VAAASRLL----KNEVIMGAF----------------DFQDCRA--FENNIDFDIRFMVE 244

Query: 208 NDVRCGQWYDVSISS-------TGPLLEKRVDL------------------LQRAEVHVC 242
             V    W ++   +       + P  E R  L                   + A + + 
Sbjct: 245 TSVVGCNWIELPAGAWRLRGRNSKPAPESRCQLEVDVAYDQFISHEPEGEWSKVAPLRIL 304

Query: 243 AFDIETTKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEGYF 302
           +FDIE       FP+A  D ++ I+ M+  QG      E    ++  L+    P      
Sbjct: 305 SFDIECAGRRGIFPEAKMDPVIQIANMVIRQG----ESEPFIRNVFTLKQC-APIIGS-- 357

Query: 303 KVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELG 358
           +V   + E +LL  W A ++EV P I   YN + FD P+L  RAAH      E LG
Sbjct: 358 QVLCYDQETQLLDKWAAFVREVDPDILTGYNINNFDIPYLLNRAAHLKVNNFEYLG 413


>gi|160874770|ref|YP_001554086.1| DNA polymerase II [Shewanella baltica OS195]
 gi|378708023|ref|YP_005272917.1| DNA polymerase B region [Shewanella baltica OS678]
 gi|418023651|ref|ZP_12662636.1| DNA polymerase B region [Shewanella baltica OS625]
 gi|160860292|gb|ABX48826.1| DNA polymerase B region [Shewanella baltica OS195]
 gi|315267012|gb|ADT93865.1| DNA polymerase B region [Shewanella baltica OS678]
 gi|353537534|gb|EHC07091.1| DNA polymerase B region [Shewanella baltica OS625]
          Length = 809

 Score = 52.4 bits (124), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 70/297 (23%), Positives = 125/297 (42%), Gaps = 43/297 (14%)

Query: 774  LQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIG-KPLELDTD 832
            L  A K I+NS YG +  +G  ++  ++A  +T  G +I++  R  IE++G + +  DTD
Sbjct: 515  LSQAIKIIMNSLYGVLGSQGCVFHDAKLASSITMRGHQIMKQTRAWIEEMGYQVIYGDTD 574

Query: 833  GIWCVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYET 892
              +  L GS P        DL     +         ++   + N ++Q  +       + 
Sbjct: 575  STFVWL-GSEP--------DLSDINALG--------NILAQDINAKWQAKI-----CADH 612

Query: 893  HSECSIEFEVDGPYKAMILPASKEEGILIKKRY-AVFNDDGTLAEL--KGFEIKRRGELK 949
              E  +E + +  Y+   +P  +      KKRY   + +     EL  KG E  R     
Sbjct: 613  QVESFLELQFERHYEQFFMPTLRGSLEGSKKRYVGAWRNASDELELTFKGMEQVRSDWSP 672

Query: 950  LIKVFQAELFDKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMS 1009
            L +  Q  L+++  +   I         +A+ +  LLD Q     D++L+        M 
Sbjct: 673  LARKVQESLYERMFNQRDIS------VYLASVFEKLLDGQ----LDNDLV----FRKRMR 718

Query: 1010 KSLADYGEQKSCAVTTARRLSDFLGDTMVKDKGLRCQYIVACE-PQGTPVSERAVPV 1065
            +++ DY  + S  V  A++L D  GDT     G +  Y++    P+  P+  R  P+
Sbjct: 719  RNIEDYTAKSSPHVKVAQQLCDVTGDTTFGKHGAQIDYLITVNGPE--PLLYRTSPI 773


>gi|432858366|ref|ZP_20084862.1| DNA polymerase II [Escherichia coli KTE146]
 gi|431408609|gb|ELG91792.1| DNA polymerase II [Escherichia coli KTE146]
          Length = 783

 Score = 52.4 bits (124), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 57/233 (24%), Positives = 90/233 (38%), Gaps = 41/233 (17%)

Query: 741 LNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHKCILNSFYGYVMRKGARWYSME 800
           +  +W G+  EAK  GN                L  A K I+N+FYG +     R++   
Sbjct: 470 VTNIWHGR-DEAKRQGNK--------------PLSQALKIIMNAFYGVLGTTACRFFDPR 514

Query: 801 MAGVVTYTGAKIIQNARLLIEKIG-KPLELDTDGIWCVLPGSFPENFTFKTKDLKKKLTI 859
           +A  +T  G +I++  + LIE +G   +  DTD  +  L G+  E    K          
Sbjct: 515 LASSITMRGHQIMRQTKALIESLGYDVIYGDTDSTFVWLKGAHSEEEAAKIGR------- 567

Query: 860 SYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEFEVDGPYKAMILPASKEEGI 919
               ++ +V+     T  Q Q L   +   YETH            +   ++P  +    
Sbjct: 568 ---ALVQHVNAWWAETL-QKQRLTSALELEYETH------------FCRFLMPTIRGADT 611

Query: 920 LIKKRYAVFNDDGTLAEL--KGFEIKRRGELKLIKVFQAELFDKFLHGSTIEE 970
             KKRYA    +G    +  KG E  R     L + FQ EL+ +       +E
Sbjct: 612 GSKKRYAGLIQEGDKQRMVFKGLETVRTDWTPLAQQFQQELYLRIFRNEPYQE 664


>gi|324120692|dbj|BAJ78737.1| DNA polymerase delta catalytic subunit [Thermobia domestica]
          Length = 1097

 Score = 52.4 bits (124), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 48/201 (23%), Positives = 80/201 (39%), Gaps = 55/201 (27%)

Query: 195 EYDVPYHIRFAIDNDVRCGQWYDVSI---------SSTGPLLEK---RVDL--------- 233
           E +V + IRF +D +V    W ++           +S+ PL  +    VD+         
Sbjct: 234 ESNVDFDIRFMVDTNVVGCSWVELPPGKWRMRSKNNSSVPLTSRCQIEVDVSWEDFISHP 293

Query: 234 -----LQRAEVHVCAFDIETTKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIE 288
                 + A   + +FDIE       FP+ ++D ++ I+ M+  QG              
Sbjct: 294 PEGEWAKVAPFRILSFDIECAGRKGIFPEPNHDPVIQIANMVVKQG-------------- 339

Query: 289 DLEYTPKPEFEGYF-----------KVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYF 337
               +P+P     F           +V + + E E+L  W   ++E+ P I+  YN + F
Sbjct: 340 ----SPEPFVRNVFTLDTCSPIVGCQVLSFSKENEMLEKWADFVRELDPDIFTGYNINNF 395

Query: 338 DWPFLETRAAHHGFKMSEELG 358
           D P+L  RA H   K    LG
Sbjct: 396 DLPYLLNRAKHLSVKNFHYLG 416


>gi|386313290|ref|YP_006009455.1| DNA polymerase B region [Shewanella putrefaciens 200]
 gi|319425915|gb|ADV53989.1| DNA polymerase B region [Shewanella putrefaciens 200]
          Length = 795

 Score = 52.4 bits (124), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 65/282 (23%), Positives = 113/282 (40%), Gaps = 40/282 (14%)

Query: 774  LQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIG-KPLELDTD 832
            L  A K I+NS YG +  +G  ++   +A  +T  G +I++  R  IE++G + +  DTD
Sbjct: 501  LSQAIKIIMNSLYGVLGSQGCVFHDARLASSITMRGHQIMKQTRAWIEEMGYQVIYGDTD 560

Query: 833  GIWCVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYET 892
              +  L G  P+       D+           +L   +A  + N ++QT    +   Y+ 
Sbjct: 561  STFVWL-GDAPD-----LSDIN----------LLGQTLA-THINTKWQT---KIQDEYQV 600

Query: 893  HSECSIEFEVDGPYKAMILPASKEEGILIKKRY--AVFNDDGTL-AELKGFEIKRRGELK 949
             S   ++FE    Y+   +P  +      KKRY  A  N    L    KG E  R     
Sbjct: 601  DSFLELQFERH--YEQFFMPTLRGSKEGSKKRYVGAWRNSKNELEITFKGMEQVRSDWSP 658

Query: 950  LIKVFQAELFDKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMS 1009
            L +  Q  L+++  +   I      V               +DI   +  D +     M 
Sbjct: 659  LARTVQQALYERMFNQRDISSYIMTVI--------------EDILTGKRDDELVFRKRMR 704

Query: 1010 KSLADYGEQKSCAVTTARRLSDFLGDTMVKDKGLRCQYIVAC 1051
            +++ +Y  + S  +  AR+L D  G +    KG +  Y++  
Sbjct: 705  RNIEEYTAKSSPHIKVARQLCDLTGTSTFGKKGAQIDYVITV 746


>gi|425898910|ref|ZP_18875501.1| DNA polymerase II [Pseudomonas chlororaphis subsp. aureofaciens
           30-84]
 gi|397889582|gb|EJL06064.1| DNA polymerase II [Pseudomonas chlororaphis subsp. aureofaciens
           30-84]
          Length = 786

 Score = 52.4 bits (124), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 55/197 (27%), Positives = 83/197 (42%), Gaps = 30/197 (15%)

Query: 774 LQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIG-KPLELDTD 832
           L  A K I+N+FYG +   G R++   +A  +T  G +I++  R LIE  G K +  DTD
Sbjct: 489 LSQALKIIMNAFYGVLGSSGCRFFDPRLASSITMRGHEIMRRTRQLIEAQGHKVIYGDTD 548

Query: 833 GIWCVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYET 892
             +  L  +  E              I    V       R++  D+Y             
Sbjct: 549 STFVWLGSAHAE---------ADATRIGRALVAHVNQWWRDHLRDEYGL----------- 588

Query: 893 HSECSIEFEVDGPYKAMILPASK--EEGILIKKRYA--VFNDDGTLAEL-KGFEIKRRGE 947
             E ++E + +  +   ++P  +  EEG   KKRYA  V   DGT   + KG E  R   
Sbjct: 589 --ESALELQFETHFCRFLMPTIRGAEEG--SKKRYAGLVTRADGTQEMVYKGLEAVRTDW 644

Query: 948 LKLIKVFQAELFDKFLH 964
             L + FQ EL+ +  H
Sbjct: 645 SPLAQQFQQELYQRIFH 661


>gi|407685096|ref|YP_006800270.1| DNA polymerase II [Alteromonas macleodii str. 'English Channel 673']
 gi|407246707|gb|AFT75893.1| DNA polymerase II [Alteromonas macleodii str. 'English Channel 673']
          Length = 767

 Score = 52.0 bits (123), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 66/272 (24%), Positives = 103/272 (37%), Gaps = 44/272 (16%)

Query: 777  AHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLEL-DTDGIW 835
            A K ++NSFYG +   G  +Y   +A  +T  G +I+Q     IE++G  +   DTD  +
Sbjct: 478  AIKILMNSFYGVLGSGGCPFYDPRLASSITLRGHEIMQTTAGWIEELGYTVIYGDTDSTF 537

Query: 836  CVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSE 895
              + G    N    T           P   L +    +  N ++  L+       E   +
Sbjct: 538  VHVEG----NDALGTP----------PETGLEL---ASIINRKWTELLKS-----EFDID 575

Query: 896  CSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQ 955
            C +E E +  +    +P  +      KKRYA     G     KG E  R     L K FQ
Sbjct: 576  CHLEIEFESHFSTFFMPTIRGSSEGSKKRYAGMK--GGELVFKGLENVRSDWTVLAKTFQ 633

Query: 956  AELFDKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLADY 1015
             EL+ K   G  +E+  ++  A               I   E+   +     + K L+ Y
Sbjct: 634  YELYKKVFTGQPVEDYINSTIAA--------------IKSGEMDHALVYKKRLRKPLSSY 679

Query: 1016 GEQKSCAVTTARRLSDFLGDTMVKDKGLRCQY 1047
             +     V  AR     L D   K++GL  +Y
Sbjct: 680  TKSLPPHVKAAR-----LADEYYKEQGLPLRY 706


>gi|191174205|ref|ZP_03035716.1| DNA polymerase II [Escherichia coli F11]
 gi|190905490|gb|EDV65118.1| DNA polymerase II [Escherichia coli F11]
          Length = 752

 Score = 52.0 bits (123), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 58/233 (24%), Positives = 90/233 (38%), Gaps = 41/233 (17%)

Query: 741 LNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHKCILNSFYGYVMRKGARWYSME 800
           +  +W G+  EAK  GN                L  A K I+N+FYG +     R++   
Sbjct: 439 VTNIWHGR-DEAKRQGNK--------------PLSQALKIIMNAFYGVLGTTACRFFDPR 483

Query: 801 MAGVVTYTGAKIIQNARLLIEKIG-KPLELDTDGIWCVLPGSFPENFTFKTKDLKKKLTI 859
           +A  +T  G +I++  + LIE  G   +  DTD  +  L G+  E    K          
Sbjct: 484 LASSITMRGHQIMRQTKTLIEAQGYDVIYGDTDSTFVWLKGAHSEEEAAKIGR------- 536

Query: 860 SYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEFEVDGPYKAMILPASKEEGI 919
               ++ +V+V    T  Q Q L   +   YETH            +   ++P  +    
Sbjct: 537 ---ALVQHVNVWWAETL-QKQRLTSALELEYETH------------FCRFLMPTIRGADT 580

Query: 920 LIKKRYAVFNDDGTLAEL--KGFEIKRRGELKLIKVFQAELFDKFLHGSTIEE 970
             KKRYA    +G    +  KG E  R     L + FQ EL+ +       +E
Sbjct: 581 GSKKRYAGLIQEGDKQRMVFKGLETVRTDWTPLAQQFQQELYLRIFRNEPYQE 633



 Score = 42.0 bits (97), Expect = 4.0,   Method: Compositional matrix adjust.
 Identities = 56/240 (23%), Positives = 99/240 (41%), Gaps = 25/240 (10%)

Query: 311 IELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHH------GFKMSE----ELGFQ 360
           +E L  WFA      P + + +N   FD   L+  A  +      G   SE    E GF+
Sbjct: 174 LEKLNAWFATHD---PDVIIGWNVVQFDLRMLQKHAERYRIPLRLGRDNSELEWREHGFK 230

Query: 361 CDKNQGECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMV---- 416
            D    + + +    +D    +K  ++    S  L+ V +  LG      NP D +    
Sbjct: 231 NDVFFAQAKGRLI--IDGIEALK-SAFWNFSSFSLETVAQELLGEGKSIDNPWDRMDEID 287

Query: 417 -RFAKEKPQMMASYSVSDA-VATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEM 474
            RFA++KP  +A+Y++ D  + T   + T + PF+   AT+  +  D     GS      
Sbjct: 288 RRFAEDKP-ALATYNLKDCELVTQIFHKTEIMPFLLERATVNGLPVDR--HGGSVAAFGH 344

Query: 475 LLMVQAYKANVICPNKHQSDPEKFYRNHLLESETYIGGHVECLESGVFRSDLPTSFKLDP 534
           L   + ++A  + PN  +  P      ++++S   +   V  L+       +  +F +DP
Sbjct: 345 LYFPRMHRAGYVAPNLGEVPPHASPGGYVMDSRPGLYDSVLVLDYKSLYPSIIRTFLIDP 404


>gi|120599390|ref|YP_963964.1| DNA polymerase II [Shewanella sp. W3-18-1]
 gi|120559483|gb|ABM25410.1| DNA damage-inducible DNA polymerase II [Shewanella sp. W3-18-1]
          Length = 797

 Score = 52.0 bits (123), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 65/282 (23%), Positives = 113/282 (40%), Gaps = 40/282 (14%)

Query: 774  LQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIG-KPLELDTD 832
            L  A K I+NS YG +  +G  ++   +A  +T  G +I++  R  IE++G + +  DTD
Sbjct: 503  LSQAIKIIMNSLYGVLGSQGCVFHDARLASSITMRGHQIMKQTRAWIEEMGYQVIYGDTD 562

Query: 833  GIWCVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYET 892
              +  L G  P+       D+           +L   +A  + N ++QT    +   Y+ 
Sbjct: 563  STFVWL-GDAPD-----LSDIN----------LLGQTLA-THINTKWQT---KIQDEYQV 602

Query: 893  HSECSIEFEVDGPYKAMILPASKEEGILIKKRY--AVFNDDGTL-AELKGFEIKRRGELK 949
             S   ++FE    Y+   +P  +      KKRY  A  N    L    KG E  R     
Sbjct: 603  DSFLELQFERH--YEQFFMPTLRGSKEGSKKRYVGAWRNSKNELEITFKGMEQVRSDWSP 660

Query: 950  LIKVFQAELFDKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMS 1009
            L +  Q  L+++  +   I      V               +DI   +  D +     M 
Sbjct: 661  LARTVQQALYERMFNQRDISSYIMTVI--------------EDILTGKRDDELVFRKRMR 706

Query: 1010 KSLADYGEQKSCAVTTARRLSDFLGDTMVKDKGLRCQYIVAC 1051
            +++ +Y  + S  +  AR+L D  G +    KG +  Y++  
Sbjct: 707  RNIEEYTAKSSPHIKVARQLCDLTGTSAFGKKGAQIDYVITV 748


>gi|340504378|gb|EGR30826.1| hypothetical protein IMG5_122980 [Ichthyophthirius multifiliis]
          Length = 1254

 Score = 52.0 bits (123), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 71/312 (22%), Positives = 132/312 (42%), Gaps = 77/312 (24%)

Query: 772  DSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIG-KPLELD 830
            D  Q A K + NS YG +    +R+Y+M +A  +T  G +++ +++ ++E +G   +  D
Sbjct: 759  DIKQKAFKLVANSIYGCLGFSSSRFYAMPIAAFITSKGREVLFSSKKIVEDMGYNVIYGD 818

Query: 831  TDGIWCVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTY 890
            TD +  + P          T+DL + + I+     L + +     N QY+ L        
Sbjct: 819  TDSLM-IRPN---------TQDLCEAIKIA-----LKIKIE---ANKQYKKL-------- 852

Query: 891  ETHSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFN-------------DDGTLAEL 937
                    + ++DG +K M+L        + KK+YA                 + T+ EL
Sbjct: 853  --------QLDIDGVFKNMLL--------IKKKKYATLKVCNWEEAYQNKNIQEITVKEL 896

Query: 938  KGFEIKRRGELKLIKVFQAELFDKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSE 997
            KG +I RR   ++ +    ++ D  L+  + E+    +          +D   K I  S+
Sbjct: 897  KGIDIVRRDWSQISRDAGNKVLDIILNSKSSEQVQENIITYLTELNKEIDE--KRIKPSD 954

Query: 998  LIDYISESSTMSKSLADYGEQKSCAVTTARRLSDFLGDTMVKDKGLRCQYIVA------- 1050
               YI++   ++K +  YGE+    V  A R        M+ +KGL  Q +V        
Sbjct: 955  Y--YITKK--LTKRIDQYGEKNIPHVEVASR--------MITEKGLDPQSLVGHIINYII 1002

Query: 1051 CEPQGTPVSERA 1062
            C+ Q + + ++A
Sbjct: 1003 CKNQSSKLIDKA 1014


>gi|324120736|dbj|BAJ78759.1| DNA polymerase delta catalytic subunit [Cryptotympana facialis]
          Length = 1102

 Score = 52.0 bits (123), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 37/118 (31%), Positives = 59/118 (50%), Gaps = 7/118 (5%)

Query: 241 VCAFDIETTKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEG 300
           + +FDIE       FP+ ++D ++ I+ M+  QG    N +    ++  L  T  P    
Sbjct: 312 ILSFDIECAGRKGIFPEPEHDPVIQIANMVINQG----NADPFIRNVFTLN-TCAPIVGC 366

Query: 301 YFKVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELG 358
             +V + +NE ++L  W A ++EV P I   YN + FD+P+L  RA H   K    LG
Sbjct: 367 --QVISSDNEADMLEKWAAFIREVDPDILTGYNINNFDFPYLINRAKHLNCKNFTFLG 422


>gi|146292614|ref|YP_001183038.1| DNA polymerase II [Shewanella putrefaciens CN-32]
 gi|145564304|gb|ABP75239.1| DNA damage-inducible DNA polymerase II [Shewanella putrefaciens
            CN-32]
          Length = 797

 Score = 52.0 bits (123), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 65/282 (23%), Positives = 113/282 (40%), Gaps = 40/282 (14%)

Query: 774  LQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIG-KPLELDTD 832
            L  A K I+NS YG +  +G  ++   +A  +T  G +I++  R  IE++G + +  DTD
Sbjct: 503  LSQAIKIIMNSLYGVLGSQGCVFHDARLASSITMRGHQIMKQTRTWIEEMGYQVIYGDTD 562

Query: 833  GIWCVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYET 892
              +  L G  P+       D+           +L   +A  + N ++QT    +   Y+ 
Sbjct: 563  STFVWL-GDAPD-----LSDIN----------LLGQTLA-THINTKWQT---KIQDEYQV 602

Query: 893  HSECSIEFEVDGPYKAMILPASKEEGILIKKRY--AVFNDDGTL-AELKGFEIKRRGELK 949
             S   ++FE    Y+   +P  +      KKRY  A  N    L    KG E  R     
Sbjct: 603  DSFLELQFERH--YEQFFMPTLRGSKEGSKKRYVGAWRNSKNELEITFKGMEQVRSDWSP 660

Query: 950  LIKVFQAELFDKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMS 1009
            L +  Q  L+++  +   I      V               +DI   +  D +     M 
Sbjct: 661  LARTVQQALYERMFNQRDISSYIMTVI--------------EDILAGKRDDELVFRKRMR 706

Query: 1010 KSLADYGEQKSCAVTTARRLSDFLGDTMVKDKGLRCQYIVAC 1051
            +++ +Y  + S  +  AR+L D  G +    KG +  Y++  
Sbjct: 707  RNIEEYTAKSSPHIKVARQLCDLTGTSTFGKKGAQIDYVITV 748


>gi|238795304|ref|ZP_04638881.1| DNA damage-inducible DNA polymerase II [Yersinia intermedia ATCC
           29909]
 gi|238725368|gb|EEQ16945.1| DNA damage-inducible DNA polymerase II [Yersinia intermedia ATCC
           29909]
          Length = 471

 Score = 52.0 bits (123), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 53/223 (23%), Positives = 93/223 (41%), Gaps = 42/223 (18%)

Query: 741 LNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHKCILNSFYGYVMRKGARWYSME 800
           +N++W+G+   AK   N                L  A K I+N+FYG +   G R++   
Sbjct: 157 VNQIWQGR-EAAKRHQNK--------------PLSQALKIIMNAFYGVLGSSGCRFFDPR 201

Query: 801 MAGVVTYTGAKIIQNARLLIEKIG-KPLELDTDGIWCVLPGSFPENFTFKT-KDLKKKLT 858
           +A  +T  G  I++  R LIE  G + +  DTD  +  L  +  E    +  K+L +++ 
Sbjct: 202 LASSITLRGHDIMRQTRELIEAQGYQVIYGDTDSTFVWLKNAHSEEQASQIGKELVRQVN 261

Query: 859 ISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEFEVDGPYKAMILPASKEEG 918
           + +                      + + +T+     C++E E +  Y+  ++P  +   
Sbjct: 262 LWWK---------------------EHIQQTFNL--PCALELEFETHYRRFLMPTIRGAE 298

Query: 919 ILIKKRYA--VFNDDGTLAELKGFEIKRRGELKLIKVFQAELF 959
              KKRYA  +   +G     KG E  R     L + FQ EL+
Sbjct: 299 QGSKKRYAGLISTPEGDQMVYKGLETVRTDWTPLAQQFQRELY 341


>gi|110640272|ref|YP_668000.1| DNA polymerase II [Escherichia coli 536]
 gi|300984201|ref|ZP_07176929.1| DNA polymerase II [Escherichia coli MS 200-1]
 gi|422376393|ref|ZP_16456644.1| DNA polymerase II [Escherichia coli MS 60-1]
 gi|432469391|ref|ZP_19711447.1| DNA polymerase II [Escherichia coli KTE206]
 gi|432711745|ref|ZP_19946800.1| DNA polymerase II [Escherichia coli KTE8]
 gi|433076216|ref|ZP_20262797.1| DNA polymerase II [Escherichia coli KTE131]
 gi|110341864|gb|ABG68101.1| DNA polymerase II [Escherichia coli 536]
 gi|300306731|gb|EFJ61251.1| DNA polymerase II [Escherichia coli MS 200-1]
 gi|324012316|gb|EGB81535.1| DNA polymerase II [Escherichia coli MS 60-1]
 gi|431001369|gb|ELD16952.1| DNA polymerase II [Escherichia coli KTE206]
 gi|431260739|gb|ELF52834.1| DNA polymerase II [Escherichia coli KTE8]
 gi|431603716|gb|ELI73139.1| DNA polymerase II [Escherichia coli KTE131]
          Length = 783

 Score = 52.0 bits (123), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 58/233 (24%), Positives = 90/233 (38%), Gaps = 41/233 (17%)

Query: 741 LNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHKCILNSFYGYVMRKGARWYSME 800
           +  +W G+  EAK  GN                L  A K I+N+FYG +     R++   
Sbjct: 470 VTNIWHGR-DEAKRQGNK--------------PLSQALKIIMNAFYGVLGTTACRFFDPR 514

Query: 801 MAGVVTYTGAKIIQNARLLIEKIG-KPLELDTDGIWCVLPGSFPENFTFKTKDLKKKLTI 859
           +A  +T  G +I++  + LIE  G   +  DTD  +  L G+  E    K          
Sbjct: 515 LASSITMRGHQIMRQTKTLIEAQGYDVIYGDTDSTFVWLKGAHSEEEAAKIGR------- 567

Query: 860 SYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEFEVDGPYKAMILPASKEEGI 919
               ++ +V+V    T  Q Q L   +   YETH            +   ++P  +    
Sbjct: 568 ---ALVQHVNVWWAETL-QKQRLTSALELEYETH------------FCRFLMPTIRGADT 611

Query: 920 LIKKRYAVFNDDGTLAEL--KGFEIKRRGELKLIKVFQAELFDKFLHGSTIEE 970
             KKRYA    +G    +  KG E  R     L + FQ EL+ +       +E
Sbjct: 612 GSKKRYAGLIQEGDKQRMVFKGLETVRTDWTPLAQQFQQELYLRIFRNEPYQE 664



 Score = 42.0 bits (97), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 56/240 (23%), Positives = 99/240 (41%), Gaps = 25/240 (10%)

Query: 311 IELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHH------GFKMSE----ELGFQ 360
           +E L  WFA      P + + +N   FD   L+  A  +      G   SE    E GF+
Sbjct: 205 LEKLNAWFATHD---PDVIIGWNVVQFDLRMLQKHAERYRIPLRLGRDNSELEWREHGFK 261

Query: 361 CDKNQGECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMV---- 416
            D    + + +    +D    +K  ++    S  L+ V +  LG      NP D +    
Sbjct: 262 NDVFFAQAKGRLI--IDGIEALK-SAFWNFSSFSLETVAQELLGEGKSIDNPWDRMDEID 318

Query: 417 -RFAKEKPQMMASYSVSDA-VATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEM 474
            RFA++KP  +A+Y++ D  + T   + T + PF+   AT+  +  D     GS      
Sbjct: 319 RRFAEDKP-ALATYNLKDCELVTQIFHKTEIMPFLLERATVNGLPVDR--HGGSVAAFGH 375

Query: 475 LLMVQAYKANVICPNKHQSDPEKFYRNHLLESETYIGGHVECLESGVFRSDLPTSFKLDP 534
           L   + ++A  + PN  +  P      ++++S   +   V  L+       +  +F +DP
Sbjct: 376 LYFPRMHRAGYVAPNLGEVPPHASPGGYVMDSRPGLYDSVLVLDYKSLYPSIIRTFLIDP 435


>gi|385304086|gb|EIF48119.1| dna polymerase alpha catalytic subunit [Dekkera bruxellensis
            AWRI1499]
          Length = 569

 Score = 52.0 bits (123), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 83/333 (24%), Positives = 134/333 (40%), Gaps = 76/333 (22%)

Query: 769  VLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIG-KPL 827
            + YD  Q A K   NS YG +    +R+Y+  +A +VT  G +I+ + R L E +G + +
Sbjct: 203  IQYDIKQRALKXTANSMYGCLGYXNSRFYAKPLAMLVTNRGREILMDTRHLAESLGMRVV 262

Query: 828  ELDTDGIWCVLPG--SFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDP 885
              DTD +  V  G  +  E   F  +D +K++                  ND+Y+ L   
Sbjct: 263  YGDTDSVM-VDTGCDTMKEALKF-AEDFRKRV------------------NDRYKLL--- 299

Query: 886  VSKTYETHSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFN-------DDGTLAELK 938
                         E  +D  +K M+L A        KK+YA  N        + T  E+K
Sbjct: 300  -------------EIGIDNVFKKMLLHA--------KKKYAAVNCTINXXGXESTSLEVK 338

Query: 939  GFEIKRRGELKLIKVFQAELFDKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSEL 998
            G ++KRR    L K     + +K L  +  EE  +A+          L B    +   ++
Sbjct: 339  GLDMKRREYCPLSKEVSTFILEKVLGDNDPEEALTAIYGYLEGITTKLXBNXIPMVKLKI 398

Query: 999  IDYISESSTMSKSLADY-GEQKSCAVTTARRLSDFLGDTMVKDKGLRCQYIVACE--PQG 1055
                  ++ +SK    Y G +   AV  A RL D      +   G    +I+  E   + 
Sbjct: 399  ------NTRLSKDPVQYPGGKTMPAVQVALRLRD---QGKIXKAGSVITFIITNEBXDKX 449

Query: 1056 TPVSERAVPV-------AIFETDAEIMKFYLRK 1081
              V+ERA  +       + +E DA+   FYL K
Sbjct: 450  ASVAERARSIQEVLSDQSKYEPDAD---FYLEK 479


>gi|399006793|ref|ZP_10709314.1| DNA polymerase elongation subunit (family B) [Pseudomonas sp. GM17]
 gi|398121688|gb|EJM11310.1| DNA polymerase elongation subunit (family B) [Pseudomonas sp. GM17]
          Length = 787

 Score = 52.0 bits (123), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 55/197 (27%), Positives = 83/197 (42%), Gaps = 30/197 (15%)

Query: 774 LQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIG-KPLELDTD 832
           L  A K I+N+FYG +   G R++   +A  +T  G +I++  R LIE  G K +  DTD
Sbjct: 490 LSQALKIIMNAFYGVLGSSGCRFFDPRLASSITMRGHEIMRRTRQLIEAQGHKVIYGDTD 549

Query: 833 GIWCVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYET 892
             +  L  +  E              I    V       R++  D+Y             
Sbjct: 550 STFVWLGSAHAE---------ADATRIGRALVAHVNQWWRDHLRDEYGL----------- 589

Query: 893 HSECSIEFEVDGPYKAMILPASK--EEGILIKKRYA--VFNDDGTLAEL-KGFEIKRRGE 947
             E ++E + +  +   ++P  +  EEG   KKRYA  V   DGT   + KG E  R   
Sbjct: 590 --ESALELQFETHFCRFLMPTIRGAEEG--SKKRYAGLVTRADGTQEMVYKGLEAVRTDW 645

Query: 948 LKLIKVFQAELFDKFLH 964
             L + FQ EL+ +  H
Sbjct: 646 SPLAQQFQQELYQRIFH 662


>gi|238759018|ref|ZP_04620189.1| DNA damage-inducible DNA polymerase II [Yersinia aldovae ATCC
           35236]
 gi|238702829|gb|EEP95375.1| DNA damage-inducible DNA polymerase II [Yersinia aldovae ATCC
           35236]
          Length = 790

 Score = 52.0 bits (123), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 55/228 (24%), Positives = 92/228 (40%), Gaps = 52/228 (22%)

Query: 741 LNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHKCILNSFYGYVMRKGARWYSME 800
           +N++W+G+   AK   N                L  A K I+N+FYG +   G R++   
Sbjct: 476 VNQIWQGR-EAAKRQQNK--------------PLSQALKIIMNAFYGVLGSSGCRFFDPR 520

Query: 801 MAGVVTYTGAKIIQNARLLIEKIG-KPLELDTDGIWCVLPGSFPENFTFKTKDLKKKLTI 859
           +A  +T  G  I++  R LIE  G + +  DTD  +  L  +  E         ++   I
Sbjct: 521 LASSITLRGHDIMRQTRELIEAQGYQVIYGDTDSTFVWLKNAHSE---------EQASVI 571

Query: 860 SYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSE------CSIEFEVDGPYKAMILPA 913
                               + LV  V++ ++ H +      C++E E +  Y+  ++P 
Sbjct: 572 G-------------------KALVRQVNQWWKAHIQQTFNLPCALELEFETHYRRFLMPT 612

Query: 914 SKEEGILIKKRYA--VFNDDGTLAELKGFEIKRRGELKLIKVFQAELF 959
            +      KKRYA  +   +G     KG E  R     L + FQ EL+
Sbjct: 613 IRGAEQGSKKRYAGLISTPNGDQMVYKGLETVRTDWTPLAQQFQRELY 660


>gi|402223440|gb|EJU03504.1| DNA polymerase alpha catalytic subunit [Dacryopinax sp. DJM-731 SS1]
          Length = 1365

 Score = 52.0 bits (123), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 74/325 (22%), Positives = 134/325 (41%), Gaps = 78/325 (24%)

Query: 701  KRVLDKPVTELREAGICMRENSFYVDTVRSFRDRRYEYKGLNKVWKGKLSEAKASGNSIK 760
            +++ D P T++ + G+  R        + +  +RR + K L K           S +  K
Sbjct: 811  EKIPDTPATDIAQ-GVLPR-------LIATLVNRRRQVKNLMK---------DKSASKAK 853

Query: 761  IQEAQDMVVLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLI 820
            +Q+       YD  Q A K   NS YG +  + +R+Y+  +A + T+ G +I+ + R L 
Sbjct: 854  LQQ-------YDIRQKALKLTANSMYGCLGFEYSRFYARPLAALTTFKGREILTHTRELA 906

Query: 821  EKIGKPLEL-DTDGIWCVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQY 879
            E +   +   DTD ++         N      +  KK+   +          + + N++Y
Sbjct: 907  ESLQLDVVYGDTDSVFV--------NSNVSDLEEAKKIANDF----------KKHVNERY 948

Query: 880  QTLVDPVSKTYETHSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFN--DDGTLA-E 936
            + L                E ++DG ++ ++L        L KK+YA     +DGT + E
Sbjct: 949  KLL----------------EIDLDGVFQRLLL--------LQKKKYAALKVEEDGTTSTE 984

Query: 937  LKGFEIKRRGELKLIKVFQAELFDKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADS 996
            +KG ++KRR    L K     + +  L G   E        V  R  + L   G+D+   
Sbjct: 985  VKGLDMKRREYCALSKTVSQAVLEFILSGEATE-------IVVERIHEYLTKIGEDVKAG 1037

Query: 997  EL-IDYISESSTMSKSLADYGEQKS 1020
            ++ +D       + K+  DY + KS
Sbjct: 1038 KIDMDEFIIFKRLGKNPEDYPDAKS 1062


>gi|293417936|ref|ZP_06660558.1| DNA polymerase II [Escherichia coli B185]
 gi|291430654|gb|EFF03652.1| DNA polymerase II [Escherichia coli B185]
          Length = 783

 Score = 52.0 bits (123), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 58/233 (24%), Positives = 90/233 (38%), Gaps = 41/233 (17%)

Query: 741 LNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHKCILNSFYGYVMRKGARWYSME 800
           +  +W G+  EAK  GN                L  A K I+N+FYG +     R++   
Sbjct: 470 VTNIWHGR-DEAKRQGNK--------------PLSQALKIIMNAFYGVLGTTACRFFDPR 514

Query: 801 MAGVVTYTGAKIIQNARLLIEKIG-KPLELDTDGIWCVLPGSFPENFTFKTKDLKKKLTI 859
           +A  +T  G +I++  + LIE  G   +  DTD  +  L G+  E    K          
Sbjct: 515 LASSITMRGHQIMRQTKALIEAQGYDVIYGDTDSTFVWLKGAHSEEEAAKIGR------- 567

Query: 860 SYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEFEVDGPYKAMILPASKEEGI 919
               ++ +V+V    T  Q Q L   +   YETH            +   ++P  +    
Sbjct: 568 ---ALVQHVNVWWAETL-QKQQLTSALELEYETH------------FCRFLMPTIRGADT 611

Query: 920 LIKKRYAVFNDDGTLAEL--KGFEIKRRGELKLIKVFQAELFDKFLHGSTIEE 970
             KKRYA    +G    +  KG E  R     L + FQ EL+ +       +E
Sbjct: 612 GSKKRYAGLIQEGDKQRMVFKGLETVRTDWTPLAQQFQQELYLRIFRNEPYQE 664



 Score = 40.8 bits (94), Expect = 7.3,   Method: Compositional matrix adjust.
 Identities = 55/241 (22%), Positives = 99/241 (41%), Gaps = 27/241 (11%)

Query: 311 IELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDKNQGECRA 370
           +E L  WFA+     P + + +N   FD   L+  A    +++   LG   D ++ E R 
Sbjct: 205 LEKLNAWFANYD---PDVIIGWNVVQFDLRMLQKHAER--YRIPLRLG--RDNSELEWRE 257

Query: 371 KFACHLDCFAWVK-----------RDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMV--- 416
               +   FA  K           + ++    S  L+ V +  LG      NP D +   
Sbjct: 258 HGFKNGVFFAQAKGRLIIDGIEALKSAFWNFSSFSLETVAQELLGEGKSIDNPWDRMDEI 317

Query: 417 --RFAKEKPQMMASYSVSDA-VATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCE 473
             RFA++KP  +A+Y++ D  + T   + T + PF+   AT+  +  D     GS     
Sbjct: 318 DRRFAEDKP-ALATYNLKDCELVTQIFHKTEIMPFLLERATVNGLPVDR--HGGSVAAFG 374

Query: 474 MLLMVQAYKANVICPNKHQSDPEKFYRNHLLESETYIGGHVECLESGVFRSDLPTSFKLD 533
            L   + ++A  + PN  +  P      ++++S   +   V  L+       +  +F +D
Sbjct: 375 HLYFPRMHRAGYVAPNLGEVPPHASPGGYVMDSRPGLYDSVLVLDYKSLYPSIIRTFLID 434

Query: 534 P 534
           P
Sbjct: 435 P 435


>gi|419912763|ref|ZP_14431210.1| DNA polymerase II [Escherichia coli KD1]
 gi|388390663|gb|EIL52139.1| DNA polymerase II [Escherichia coli KD1]
          Length = 783

 Score = 52.0 bits (123), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 58/233 (24%), Positives = 90/233 (38%), Gaps = 41/233 (17%)

Query: 741 LNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHKCILNSFYGYVMRKGARWYSME 800
           +  +W G+  EAK  GN                L  A K I+N+FYG +     R++   
Sbjct: 470 VTNIWHGR-DEAKRQGNK--------------PLSQALKIIMNAFYGVLGTTACRFFDPR 514

Query: 801 MAGVVTYTGAKIIQNARLLIEKIG-KPLELDTDGIWCVLPGSFPENFTFKTKDLKKKLTI 859
           +A  +T  G +I++  + LIE  G   +  DTD  +  L G+  E    K          
Sbjct: 515 LASSITMRGHQIMRQTKTLIEAQGYDVIYGDTDSTFVWLKGAHSEEEAAKIGR------- 567

Query: 860 SYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEFEVDGPYKAMILPASKEEGI 919
               ++ +V+V    T  Q Q L   +   YETH            +   ++P  +    
Sbjct: 568 ---ALVQHVNVWWAETL-QKQRLTSALELEYETH------------FCRFLMPTIRGADT 611

Query: 920 LIKKRYAVFNDDGTLAEL--KGFEIKRRGELKLIKVFQAELFDKFLHGSTIEE 970
             KKRYA    +G    +  KG E  R     L + FQ EL+ +       +E
Sbjct: 612 GSKKRYAGLIQEGDKQRMVFKGLETVRTDWTPLAQQFQQELYLRIFRNEPYQE 664


>gi|407701337|ref|YP_006826124.1| DNA polymerase II [Alteromonas macleodii str. 'Black Sea 11']
 gi|407250484|gb|AFT79669.1| DNA polymerase II [Alteromonas macleodii str. 'Black Sea 11']
          Length = 767

 Score = 52.0 bits (123), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 64/272 (23%), Positives = 105/272 (38%), Gaps = 44/272 (16%)

Query: 777  AHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLEL-DTDGIW 835
            A K ++NSFYG +   G  +Y   +A  +T  G +I+Q     IE++G  +   DTD  +
Sbjct: 478  AIKILMNSFYGVLGSGGCPFYDPRLASSITLRGHEIMQTTAGWIEELGYTVIYGDTDSTF 537

Query: 836  CVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSE 895
              + G+       +T                 +++A +  N ++  L+       +   E
Sbjct: 538  VHVEGNDALGTPSET----------------GLELA-SIINRKWTELLKS-----QFDIE 575

Query: 896  CSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQ 955
            C +E E +  +    +P  +      KKRYA     G     KG E  R     L K FQ
Sbjct: 576  CHLEIEFESHFSTFFMPTIRGSSEGSKKRYAGMK--GGELVFKGLENVRSDWTVLAKTFQ 633

Query: 956  AELFDKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLADY 1015
             EL+ K   G  +E+  ++  A               I   E+   +     + K L+ Y
Sbjct: 634  YELYKKVFTGQPVEDYINSTIAA--------------IKSGEMDHALVYKKRLRKPLSSY 679

Query: 1016 GEQKSCAVTTARRLSDFLGDTMVKDKGLRCQY 1047
             +     V  AR     L D   K++GL  +Y
Sbjct: 680  TKSLPPHVKAAR-----LADEYYKEQGLPLRY 706


>gi|384486877|gb|EIE79057.1| hypothetical protein RO3G_03762 [Rhizopus delemar RA 99-880]
          Length = 1059

 Score = 52.0 bits (123), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 69/305 (22%), Positives = 123/305 (40%), Gaps = 41/305 (13%)

Query: 66  IDLYFVSQDGSTFKSKYK-FRPYFYAATKEKMEMDVEAYLRRRYESQIADIEILEKEDLD 124
           I LY V+Q+G++     K F PYFY       +    A L++   + +    I++  D+ 
Sbjct: 100 IRLYGVTQEGNSVLCHVKGFHPYFYFPAPVGFQRSHLASLKQSLSTAVGFGNIIDNVDIV 159

Query: 125 LKNHLSG----LHKSYLKISFDTVQQLMDVKKDLLHVVERNQAKFD----AAEAYESILT 176
           +K  + G    +   Y++++    + +   K  +   +    A  D    A   +E   +
Sbjct: 160 MKQSIYGYQGDIKTPYIRVTVYDPKDISKCKGKIESGI--TVAGLDRPCRADTTFEITGS 217

Query: 177 GKREQRPQDFLDCIVDLREYDVPYHIRFAID---NDVRCGQWYDVSISSTGPLLEKRVDL 233
              E  P  F    V+ R  ++   +    D   + V  G+W     S   PL       
Sbjct: 218 NWIELPPGTF--SFVNKRTSEIQLEVETTYDKLISHVPEGEW-----SGIAPL------- 263

Query: 234 LQRAEVHVCAFDIETTKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYT 293
                  + +FDIE       FP+   D ++ I+ ++   G     ++    ++  L+ T
Sbjct: 264 ------RILSFDIECAGRKGIFPEPSVDPVIQIASVVQIHG----QKKPFIRNVFTLD-T 312

Query: 294 PKPEFEGYFKVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKM 353
             P      +V   ++E ELL+ W   ++EV P + + YN   FD+P+L  RA H G   
Sbjct: 313 CAPIVGS--QVLCFDDESELLKKWSDFIREVDPDMIIGYNTTNFDFPYLLDRAQHLGVNK 370

Query: 354 SEELG 358
              LG
Sbjct: 371 FPFLG 375


>gi|324120750|dbj|BAJ78766.1| DNA polymerase delta catalytic subunit [Protohermes grandis]
          Length = 1046

 Score = 52.0 bits (123), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 47/179 (26%), Positives = 77/179 (43%), Gaps = 35/179 (19%)

Query: 195 EYDVPYHIRFAIDNDVRCGQWY-----------DVSISSTGPLLEKRVDLL--------- 234
           E +V + IRF +D +++   W            D+S SST       VD+          
Sbjct: 184 ESNVDFDIRFMVDMNIKGCCWIELPANKWKLRSDMSKSST---CHYEVDVAFDSFVAHLP 240

Query: 235 -----QRAEVHVCAFDIETTKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIED 289
                + A  ++ +FDIE    P  FPD + D I+ I+ ++   G    + E V  ++  
Sbjct: 241 EGEWAKVAPFYILSFDIECAGRPNTFPDPNIDPIIQIANVVQKYG----DTELVACNVFT 296

Query: 290 LEYTPKPEFEGYFKVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAH 348
           L  T  P    + +V + + E +LL  W   + +V P     YN + FD P++  RA H
Sbjct: 297 LN-TCAPI--AHAEVYSFDKETDLLNAWVKFIHDVDPDFVTGYNINNFDLPYIIDRAKH 352


>gi|406596824|ref|YP_006747954.1| DNA polymerase II [Alteromonas macleodii ATCC 27126]
 gi|406598072|ref|YP_006749202.1| DNA polymerase II [Alteromonas macleodii ATCC 27126]
 gi|406374145|gb|AFS37400.1| DNA polymerase II [Alteromonas macleodii ATCC 27126]
 gi|406375393|gb|AFS38648.1| DNA polymerase II [Alteromonas macleodii ATCC 27126]
          Length = 767

 Score = 52.0 bits (123), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 64/272 (23%), Positives = 105/272 (38%), Gaps = 44/272 (16%)

Query: 777  AHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLEL-DTDGIW 835
            A K ++NSFYG +   G  +Y   +A  +T  G +I+Q     IE++G  +   DTD  +
Sbjct: 478  AIKILMNSFYGVLGSGGCPFYDPRLASSITLRGHEIMQTTAGWIEELGYTVIYGDTDSTF 537

Query: 836  CVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSE 895
              + G+       +T                 +++A +  N ++  L+       E   +
Sbjct: 538  VHVEGNDALGSPSET----------------GLELA-SIINRKWTELLKS-----EFDID 575

Query: 896  CSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQ 955
            C +E E +  +    +P  +      KKRYA     G     KG E  R     L K FQ
Sbjct: 576  CHLEIEFESHFSTFFMPTIRGSSEGSKKRYAGMK--GGELVFKGLENVRSDWTVLAKTFQ 633

Query: 956  AELFDKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLADY 1015
             EL+ K   G  +E+  ++  A               I   E+   +     + K L+ Y
Sbjct: 634  YELYKKVFTGQPVEDYINSTIAA--------------IKSGEMDHALVYKKRLRKPLSSY 679

Query: 1016 GEQKSCAVTTARRLSDFLGDTMVKDKGLRCQY 1047
             +     V  AR     L D   K++GL  +Y
Sbjct: 680  TKSLPPHVKAAR-----LADEYYKEQGLPLRY 706


>gi|386021503|ref|YP_005939527.1| DNA polymerase II [Pseudomonas stutzeri DSM 4166]
 gi|327481475|gb|AEA84785.1| DNA polymerase II [Pseudomonas stutzeri DSM 4166]
          Length = 797

 Score = 51.6 bits (122), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 55/198 (27%), Positives = 88/198 (44%), Gaps = 32/198 (16%)

Query: 774 LQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGK-PLELDTD 832
           L  A K I+N+FYG +   G R++   +A  +T  G +I++  R LIE  G   +  DTD
Sbjct: 500 LSQALKIIMNAFYGVLGSSGCRFFDPRLASSITLRGHEIMRRTRELIEAQGHVVIYGDTD 559

Query: 833 GIWCVLPGSFPENFTFKT-KDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYE 891
             +  L  +  +    +  +DL +++   +          R +  D+Y  L   +   YE
Sbjct: 560 STFVWLGRAHSDEAAERIGRDLVQRINEWW----------RGHLRDEY-GLSSALELQYE 608

Query: 892 THSECSIEFEVDGPYKAMILPASK--EEGILIKKRYA--VFNDDGTLAEL-KGFEIKRRG 946
           TH            ++  ++P  +  EEG   KKRYA  V   DG+   + KG E  R  
Sbjct: 609 TH------------FRRFLMPTIRGAEEG--SKKRYAGLVTRADGSDGMVFKGLETVRTD 654

Query: 947 ELKLIKVFQAELFDKFLH 964
              L + FQ EL+ +  H
Sbjct: 655 WSPLAQRFQQELYLRIFH 672


>gi|270002921|gb|EEZ99368.1| DNA polymerase delta [Tribolium castaneum]
          Length = 1050

 Score = 51.6 bits (122), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 35/122 (28%), Positives = 58/122 (47%), Gaps = 7/122 (5%)

Query: 237 AEVHVCAFDIETTKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKP 296
           A   + +FDIE       FP+ + D I+ I+ ++   G    + + V  +I  L      
Sbjct: 252 ARFRIHSFDIECAGRKGIFPEPNVDPIIQIANVIKLHG----DEDVVTRNIFTLNSCAPI 307

Query: 297 EFEGYFKVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEE 356
              G+ +V + + E E+L  W   ++E  P I+  YN + FD+P+L  RA H   K  + 
Sbjct: 308 ---GHAEVRSFDTEAEMLEEWAEFVRETDPDIFTGYNINNFDFPYLIERANHLKLKRFDY 364

Query: 357 LG 358
           LG
Sbjct: 365 LG 366


>gi|443924628|gb|ELU43623.1| DNA polymerase delta catalytic subunit [Rhizoctonia solani AG-1 IA]
          Length = 1003

 Score = 51.6 bits (122), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 46/184 (25%), Positives = 74/184 (40%), Gaps = 49/184 (26%)

Query: 195 EYDVPYHIRFAIDNDVRCGQWYDV------------SISSTGPLLEKRVDLLQR------ 236
           E ++P+ +RF +D ++    W +              IS+    L  R DL++       
Sbjct: 241 ESNMPFELRFMVDREIVGMNWVEAPAGAYELRSDSQKISTCQIELNIRYDLIKSYPADGE 300

Query: 237 ----AEVHVCAFDIETTKLPLKFPDADYDIIMMISYMLDGQG-------YLIINREC--- 282
               A + + +FDIE       FP+A  D ++ I+ M+  QG        +    +C   
Sbjct: 301 WSKVAPLRILSFDIECAGRKGIFPEASIDPVIQIANMVTVQGESSPFVRNVFTLDDCAHI 360

Query: 283 VGEDIEDLEYTPKPEFEGYFKVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFL 342
           VG D                 V +  NE  +L  W A ++EV P + + YN   FD P+L
Sbjct: 361 VGSD-----------------VISFKNEDAMLLAWRAFVEEVDPDVVIGYNIANFDLPYL 403

Query: 343 ETRA 346
             RA
Sbjct: 404 LDRA 407


>gi|294658522|ref|XP_460862.2| DEHA2F11440p [Debaryomyces hansenii CBS767]
 gi|202953194|emb|CAG89207.2| DEHA2F11440p [Debaryomyces hansenii CBS767]
          Length = 1470

 Score = 51.6 bits (122), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 78/324 (24%), Positives = 130/324 (40%), Gaps = 60/324 (18%)

Query: 771  YDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIG-KPLEL 829
            YD  Q A K   NS YG +    +R+Y+  +A +VT  G +I+ + R L E IG + +  
Sbjct: 942  YDIKQQALKLTANSMYGCLGYVNSRFYAKPLAMLVTNKGREILMDTRQLAESIGLRVVYG 1001

Query: 830  DTDGIWCVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKT 889
            DTD +                 D K+ + I         +  +   N++Y+ L       
Sbjct: 1002 DTDSVM----------IDTGVDDFKEAIKIG--------EEFKIQVNERYKLL------- 1036

Query: 890  YETHSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELK 949
                     E ++D  +K ++L A K+   +          +    E+KG +++RR   +
Sbjct: 1037 ---------EIDIDNVFKRLLLHAKKKYAAMTTSIDRKTGQEIVKLEVKGLDMRRREYCQ 1087

Query: 950  LIKVFQAELFDKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSEL-IDYISESSTM 1008
            L K     + +K L  +  E+  S V        + L++  + I D+E+ +D    ++ +
Sbjct: 1088 LSKDMSTFVLEKILSDADPEQALSDV-------YEYLEDMTRKIKDNEIQVDKFKINTRL 1140

Query: 1009 SKSLADYGEQKSC-AVTTARRLSDFLGDTMVKDKGLRCQYIV---ACEPQGTPVSERAVP 1064
            SK    Y   K+   V  A RL        V   G    YI+   A E    P +ERA  
Sbjct: 1141 SKDPNSYPNGKTMPPVQVALRLR---ASGKVIKAGSVITYIITAPASEDDKAPPAERARA 1197

Query: 1065 V-------AIFETDAEIMKFYLRK 1081
            +       A  + DA+   FYL K
Sbjct: 1198 IQEVLNKQANLKPDAD---FYLEK 1218


>gi|33622301|ref|NP_891948.1| DNA polymerase [Cryptophlebia leucotreta granulovirus]
 gi|33569410|gb|AAQ21696.1| DNA polymerase [Cryptophlebia leucotreta granulovirus]
          Length = 1045

 Score = 51.6 bits (122), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 55/222 (24%), Positives = 97/222 (43%), Gaps = 25/222 (11%)

Query: 235 QRAEVHVCAFDIETTKLPLKFPDADYDIIMMISYML----DGQGYLIINRECVGEDIEDL 290
           Q  +V V  FD+ET      F +A+ D I+ IS ++    + + Y +IN +     ++D 
Sbjct: 197 QYTDVIVACFDLETYTNLSSFSNANIDPIITISLVVKMHDEMKMYCLINTQGNNFSLDD- 255

Query: 291 EYTPKPEFEGYFKVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHG 350
                 E +G   V    NE E+++ +F  + +  P   + YNGD FD P+L  R+    
Sbjct: 256 --KVDAEVDGQIVVLPFYNEKEMIKAFFLLLWKSNPDTILDYNGDKFDLPYLVQRSKLLD 313

Query: 351 FKMSEELGFQ---CDKNQGECRAKFA-----------CHLDCFAWVKRDSYLPQGSQGLK 396
             +     +     D N  E + KF             HLD + ++K  S+     + LK
Sbjct: 314 IDLKFIRRYNLPPIDMNTIEVKTKFGYNFNNYFMKYFNHLDVYQFIK-SSFDASKIENLK 372

Query: 397 AVTKAK--LGYDPLEVNPEDMVR-FAKEKPQMMASYSVSDAV 435
             T A   L    +E++  +M+  + K +   +  Y+V D++
Sbjct: 373 LDTVASFYLKKKKVELSVREMIDLYNKNQYAKIVKYNVIDSI 414


>gi|312970154|ref|ZP_07784336.1| DNA polymerase II [Escherichia coli 1827-70]
 gi|310337652|gb|EFQ02763.1| DNA polymerase II [Escherichia coli 1827-70]
          Length = 783

 Score = 51.6 bits (122), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 57/233 (24%), Positives = 89/233 (38%), Gaps = 41/233 (17%)

Query: 741 LNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHKCILNSFYGYVMRKGARWYSME 800
           +  +W G+  EAK  GN                L  A K I+N+FYG +     R++   
Sbjct: 470 VTNIWHGR-DEAKRQGNK--------------PLSQALKIIMNAFYGVLGTTACRFFDPR 514

Query: 801 MAGVVTYTGAKIIQNARLLIEKIG-KPLELDTDGIWCVLPGSFPENFTFKTKDLKKKLTI 859
           +A  +T  G +I++  + LIE  G   +  DTD  +  L G+  E    K          
Sbjct: 515 LASSITMRGHQIMRQTKALIEAQGYDVIYGDTDSTFVWLKGAHAEEEAAKIGS------- 567

Query: 860 SYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEFEVDGPYKAMILPASKEEGI 919
               ++ +V+     T  Q Q L   +   YETH            +   ++P  +    
Sbjct: 568 ---ALVQHVNAWWAETLQQ-QRLTSALELEYETH------------FCRFLMPTIRGADT 611

Query: 920 LIKKRYAVFNDDGTLAEL--KGFEIKRRGELKLIKVFQAELFDKFLHGSTIEE 970
             KKRYA    +G    +  KG E  R     L + FQ EL+ +       +E
Sbjct: 612 GSKKRYAGLIQEGDKQRMVFKGLETVRTDWTPLAQQFQQELYLRIFRNEPYQE 664



 Score = 41.2 bits (95), Expect = 6.3,   Method: Compositional matrix adjust.
 Identities = 55/241 (22%), Positives = 99/241 (41%), Gaps = 27/241 (11%)

Query: 311 IELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDKNQGECRA 370
           +E L  WFA+     P + + +N   FD   L+  A    +++   LG   D ++ E R 
Sbjct: 205 LEKLNAWFANYD---PDVIIGWNVVQFDLRMLQKHAER--YRLPLRLG--RDNSELEWRE 257

Query: 371 KFACHLDCFAWVK-----------RDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMV--- 416
               +   FA  K           + ++    S  L+ V +  LG      NP D +   
Sbjct: 258 HGFKNGVFFAQAKGRLIIDGIEALKSAFWNFSSFSLETVAQELLGEGKSIDNPWDRMDEI 317

Query: 417 --RFAKEKPQMMASYSVSDA-VATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCE 473
             RFA++KP  +A+Y++ D  + T   + T + PF+   AT+  +  D     GS     
Sbjct: 318 DRRFAEDKP-ALATYNLKDCELVTQIFHKTEIMPFLLERATVNGLPVDR--HGGSVAAFG 374

Query: 474 MLLMVQAYKANVICPNKHQSDPEKFYRNHLLESETYIGGHVECLESGVFRSDLPTSFKLD 533
            L   + ++A  + PN  +  P      ++++S   +   V  L+       +  +F +D
Sbjct: 375 HLYFPRMHRAGYVAPNLGEVPPHASPGGYVMDSRPGLYDSVLVLDYKSLYPSIIRTFLID 434

Query: 534 P 534
           P
Sbjct: 435 P 435


>gi|170768633|ref|ZP_02903086.1| DNA polymerase II [Escherichia albertii TW07627]
 gi|170122737|gb|EDS91668.1| DNA polymerase II [Escherichia albertii TW07627]
          Length = 783

 Score = 51.6 bits (122), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 57/233 (24%), Positives = 87/233 (37%), Gaps = 41/233 (17%)

Query: 741 LNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHKCILNSFYGYVMRKGARWYSME 800
           +  +W G+  EAK  GN                L  A K I+N+FYG +     R++   
Sbjct: 470 VTNIWHGR-DEAKRQGNK--------------PLSQALKIIMNAFYGVLGTTACRFFDPR 514

Query: 801 MAGVVTYTGAKIIQNARLLIEKIG-KPLELDTDGIWCVLPGSFPENFTFKTKDLKKKLTI 859
           +A  +T  G +I++  + LIE  G   +  DTD  +  L G+  E    K      +   
Sbjct: 515 LASSITMRGHQIMRQTKALIEAQGYDVIYGDTDSTFVWLKGAHSEEEAAKIGRALVRHVN 574

Query: 860 SYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEFEVDGPYKAMILPASKEEGI 919
           ++    L           Q Q L   +   YETH            Y   ++P  +    
Sbjct: 575 AWWAETL-----------QKQRLTSALELEYETH------------YCRFLMPTIRGADT 611

Query: 920 LIKKRYAVFNDDGTLAEL--KGFEIKRRGELKLIKVFQAELFDKFLHGSTIEE 970
             KKRYA    +G    +  KG E  R     L + FQ EL+ +       +E
Sbjct: 612 GSKKRYAGLIQEGDKQRMVFKGLETVRTDWTPLAQQFQQELYLRIFRNEPYQE 664



 Score = 41.6 bits (96), Expect = 5.2,   Method: Compositional matrix adjust.
 Identities = 53/240 (22%), Positives = 98/240 (40%), Gaps = 25/240 (10%)

Query: 311 IELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMS----------EELGFQ 360
           +E L  WFA+     P + + +N   FD   L+  A  +   +S           E GF+
Sbjct: 205 LEKLNAWFANYD---PDVIIGWNVVQFDLRMLQKLAERYRIPLSLGRDNSELEWREHGFK 261

Query: 361 CDKNQGECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMV---- 416
                 + + +    +D    +K  ++    S  L+ V +  LG      NP D +    
Sbjct: 262 NGVFFAQAKGRLI--IDGIEALK-SAFWNFSSFSLETVAQELLGEGKSIDNPWDRMDEID 318

Query: 417 -RFAKEKPQMMASYSVSDA-VATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEM 474
            RFA++KP  +A+Y++ D  + T   + T + PF+   AT+  +  D     GS      
Sbjct: 319 RRFAEDKP-ALATYNLKDCELVTQIFHKTEIMPFLLERATVNGLPVDR--HGGSVAAFGH 375

Query: 475 LLMVQAYKANVICPNKHQSDPEKFYRNHLLESETYIGGHVECLESGVFRSDLPTSFKLDP 534
           L   + ++A  + PN  +  P      ++++S   +   V  L+       +  +F +DP
Sbjct: 376 LYFPRMHRAGYVAPNLGEVPPHASPGGYVMDSRPGLYDSVLVLDYKSLYPSIIRTFLIDP 435


>gi|418293268|ref|ZP_12905182.1| DNA polymerase II [Pseudomonas stutzeri ATCC 14405 = CCUG 16156]
 gi|379064665|gb|EHY77408.1| DNA polymerase II [Pseudomonas stutzeri ATCC 14405 = CCUG 16156]
          Length = 788

 Score = 51.6 bits (122), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 54/197 (27%), Positives = 84/197 (42%), Gaps = 30/197 (15%)

Query: 774 LQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLEL-DTD 832
           L  A K I+N+FYG +   G R++   +A  +T  G +I++  R LIE  G  +   DTD
Sbjct: 491 LSQALKIIMNAFYGVLGSSGCRFFDTRLASSITLRGHEIMRRTRELIEAQGHAVIYGDTD 550

Query: 833 GIWCVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYET 892
             +  L  +  ++         +   I +  V       R +   +Y  L   +   YET
Sbjct: 551 STFVWLRKAHSDD---------EAARIGHELVQRINQWWREHLRAEY-GLTSALELQYET 600

Query: 893 HSECSIEFEVDGPYKAMILPASK--EEGILIKKRYA--VFNDDGTLAEL-KGFEIKRRGE 947
           H            ++  ++P  +  EEG   KKRYA  V   DG+   + KG E  R   
Sbjct: 601 H------------FRRFLMPTIRGAEEG--SKKRYAGLVTRPDGSDGMVFKGLETVRTDW 646

Query: 948 LKLIKVFQAELFDKFLH 964
             L + FQ EL+ +  H
Sbjct: 647 SPLAQCFQQELYQRIFH 663


>gi|425286570|ref|ZP_18677524.1| DNA polymerase [Escherichia coli 3006]
 gi|408219681|gb|EKI43799.1| DNA polymerase [Escherichia coli 3006]
          Length = 783

 Score = 51.6 bits (122), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 57/233 (24%), Positives = 89/233 (38%), Gaps = 41/233 (17%)

Query: 741 LNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHKCILNSFYGYVMRKGARWYSME 800
           +  +W G+  EAK  GN                L  A K I+N+FYG +     R++   
Sbjct: 470 VTNIWHGR-DEAKRQGNK--------------PLSQALKIIMNAFYGVLGTTACRFFDPR 514

Query: 801 MAGVVTYTGAKIIQNARLLIEKIG-KPLELDTDGIWCVLPGSFPENFTFKTKDLKKKLTI 859
           +A  +T  G +I++  + LIE  G   +  DTD  +  L G+  E    K          
Sbjct: 515 LASSITMRGHQIMRQTKALIEAQGYDVIYGDTDSTFVWLKGAHSEEEAAKIGS------- 567

Query: 860 SYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEFEVDGPYKAMILPASKEEGI 919
               ++ +V+     T  Q Q L   +   YETH            +   ++P  +    
Sbjct: 568 ---ALVQHVNAWWAETLQQ-QRLTSALELEYETH------------FCRFLMPTIRGADT 611

Query: 920 LIKKRYAVFNDDGTLAEL--KGFEIKRRGELKLIKVFQAELFDKFLHGSTIEE 970
             KKRYA    +G    +  KG E  R     L + FQ EL+ +       +E
Sbjct: 612 GSKKRYAGLIQEGDKQRMVFKGLETVRTDWTPLAQQFQQELYLRIFRNEPYQE 664


>gi|378951750|ref|YP_005209238.1| DNA polymerase II [Pseudomonas fluorescens F113]
 gi|359761764|gb|AEV63843.1| DNA polymerase II [Pseudomonas fluorescens F113]
          Length = 787

 Score = 51.6 bits (122), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 52/198 (26%), Positives = 82/198 (41%), Gaps = 32/198 (16%)

Query: 774 LQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDG 833
           L  A K I+N+FYG +   G R++   +A  +T  G +I+Q+ R LIE  G         
Sbjct: 490 LSQALKIIMNAFYGVLGSSGCRFFDTRLASSITLRGHQIMQHTRQLIEAQGH-------- 541

Query: 834 IWCVLPGSFPENFTF--KTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYE 891
              V+ G     F +  +    ++   I    V       R    D++            
Sbjct: 542 --VVIYGDTDSTFVWLRRAHGQEEAARIGRELVAHVNQWWRGQVRDEFGL---------- 589

Query: 892 THSECSIEFEVDGPYKAMILPASK--EEGILIKKRYA--VFNDDGTLAEL-KGFEIKRRG 946
              E ++E + +  +K  ++P  +  EEG   KKRYA  V   DG+   + KG E  R  
Sbjct: 590 ---ESALELQFETHFKRFLMPTIRGAEEG--SKKRYAGLVTRADGSDEIVYKGLETVRTD 644

Query: 947 ELKLIKVFQAELFDKFLH 964
              L + FQ EL+ +  H
Sbjct: 645 WSPLARQFQQELYGRIFH 662


>gi|432529361|ref|ZP_19766420.1| DNA polymerase II [Escherichia coli KTE233]
 gi|431058179|gb|ELD67588.1| DNA polymerase II [Escherichia coli KTE233]
          Length = 783

 Score = 51.6 bits (122), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 57/233 (24%), Positives = 89/233 (38%), Gaps = 41/233 (17%)

Query: 741 LNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHKCILNSFYGYVMRKGARWYSME 800
           +  +W G+  EAK  GN                L  A K I+N+FYG +     R++   
Sbjct: 470 VTNIWHGR-DEAKRQGNK--------------PLSQALKIIMNAFYGVLGTTACRFFDPR 514

Query: 801 MAGVVTYTGAKIIQNARLLIEKIG-KPLELDTDGIWCVLPGSFPENFTFKTKDLKKKLTI 859
           +A  +T  G +I++  + LIE  G   +  DTD  +  L G+  E    K          
Sbjct: 515 LASSITMRGHQIMRQTKALIEAQGYDVIYGDTDSTFVWLKGAHSEEEAAKIGS------- 567

Query: 860 SYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEFEVDGPYKAMILPASKEEGI 919
               ++ +V+     T  Q Q L   +   YETH            +   ++P  +    
Sbjct: 568 ---ALVQHVNAWWAETLQQ-QRLTSALELEYETH------------FCRFLMPTIRGADT 611

Query: 920 LIKKRYAVFNDDGTLAEL--KGFEIKRRGELKLIKVFQAELFDKFLHGSTIEE 970
             KKRYA    +G    +  KG E  R     L + FQ EL+ +       +E
Sbjct: 612 GSKKRYAGLIQEGDKQRMVFKGLETVRTDWTPLAQQFQQELYLRIFRNEPYQE 664



 Score = 40.8 bits (94), Expect = 8.7,   Method: Compositional matrix adjust.
 Identities = 55/241 (22%), Positives = 99/241 (41%), Gaps = 27/241 (11%)

Query: 311 IELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDKNQGECRA 370
           +E L  WFA+     P + + +N   FD   L+  A    +++   LG   D ++ E R 
Sbjct: 205 LEKLNAWFANYD---PDVIIGWNVVQFDLRMLQKHAER--YRIPLRLG--RDNSELEWRE 257

Query: 371 KFACHLDCFAWVK-----------RDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMV--- 416
               +   FA  K           + ++    S  L+ V +  LG      NP D +   
Sbjct: 258 HGFKNGVFFAQAKGRLIIDGIEALKSAFWNFSSFSLETVAQELLGEGKSIDNPWDRMDEI 317

Query: 417 --RFAKEKPQMMASYSVSDA-VATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCE 473
             RFA++KP  +A+Y++ D  + T   + T + PF+   AT+  +  D     GS     
Sbjct: 318 DRRFAEDKP-ALATYNLKDCELVTQIFHKTEIMPFLLERATVNGLPVDR--HGGSVAAFG 374

Query: 474 MLLMVQAYKANVICPNKHQSDPEKFYRNHLLESETYIGGHVECLESGVFRSDLPTSFKLD 533
            L   + ++A  + PN  +  P      ++++S   +   V  L+       +  +F +D
Sbjct: 375 HLYFPRMHRAGYVAPNLGEVPPHASPGGYVMDSRPGLYDSVLVLDYKSLYPSIIRTFLID 434

Query: 534 P 534
           P
Sbjct: 435 P 435


>gi|189234183|ref|XP_967290.2| PREDICTED: similar to DNA polymerase delta catalytic subunit
           [Tribolium castaneum]
          Length = 1172

 Score = 51.6 bits (122), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 35/122 (28%), Positives = 58/122 (47%), Gaps = 7/122 (5%)

Query: 237 AEVHVCAFDIETTKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKP 296
           A   + +FDIE       FP+ + D I+ I+ ++   G    + + V  +I  L      
Sbjct: 252 ARFRIHSFDIECAGRKGIFPEPNVDPIIQIANVIKLHG----DEDVVTRNIFTLNSCAPI 307

Query: 297 EFEGYFKVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEE 356
              G+ +V + + E E+L  W   ++E  P I+  YN + FD+P+L  RA H   K  + 
Sbjct: 308 ---GHAEVRSFDTEAEMLEEWAEFVRETDPDIFTGYNINNFDFPYLIERANHLKLKRFDY 364

Query: 357 LG 358
           LG
Sbjct: 365 LG 366


>gi|188493306|ref|ZP_03000576.1| DNA polymerase II [Escherichia coli 53638]
 gi|188488505|gb|EDU63608.1| DNA polymerase II [Escherichia coli 53638]
          Length = 783

 Score = 51.6 bits (122), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 57/233 (24%), Positives = 89/233 (38%), Gaps = 41/233 (17%)

Query: 741 LNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHKCILNSFYGYVMRKGARWYSME 800
           +  +W G+  EAK  GN                L  A K I+N+FYG +     R++   
Sbjct: 470 VTNIWHGR-DEAKRQGNK--------------PLSQALKIIMNAFYGVLGTTACRFFDPR 514

Query: 801 MAGVVTYTGAKIIQNARLLIEKIG-KPLELDTDGIWCVLPGSFPENFTFKTKDLKKKLTI 859
           +A  +T  G +I++  + LIE  G   +  DTD  +  L G+  E    K          
Sbjct: 515 LASSITMRGHQIMRQTKALIEAQGYDVIYGDTDSTFVWLKGAHAEEEAAKIGS------- 567

Query: 860 SYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEFEVDGPYKAMILPASKEEGI 919
               ++ +V+     T  Q Q L   +   YETH            +   ++P  +    
Sbjct: 568 ---ALVQHVNAWWAETLQQ-QRLTSALELEYETH------------FCRFLMPTIRGADT 611

Query: 920 LIKKRYAVFNDDGTLAEL--KGFEIKRRGELKLIKVFQAELFDKFLHGSTIEE 970
             KKRYA    +G    +  KG E  R     L + FQ EL+ +       +E
Sbjct: 612 GSKKRYAGLIQEGDKQRMVFKGLETVRTDWTPLAQQFQQELYLRIFRNEPYQE 664


>gi|448726255|ref|ZP_21708665.1| DNA-directed DNA polymerase [Halococcus morrhuae DSM 1307]
 gi|445795873|gb|EMA46393.1| DNA-directed DNA polymerase [Halococcus morrhuae DSM 1307]
          Length = 913

 Score = 51.6 bits (122), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 66/270 (24%), Positives = 102/270 (37%), Gaps = 45/270 (16%)

Query: 771  YDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLEL- 829
            +D  Q A K I+NS YG +  +  R Y  EM   VT TG ++I++      ++   +   
Sbjct: 576  FDRQQSAVKVIMNSLYGVLGWERFRLYDREMGAAVTATGREVIEHTENAANELNYQVAYG 635

Query: 830  DTDGIWCVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKT 889
            DTD +   L G           D+ K+  I     +        + ND Y        + 
Sbjct: 636  DTDSVMLELGG-----------DVAKESAIEQAGTI------EGHINDSYDAFAS--EQL 676

Query: 890  YETHSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVF-----NDDGTLAELKGFEIKR 944
               +    IEFE           A K      KKRYA         D    ++ GFE KR
Sbjct: 677  GADNHRFEIEFE---KLYRRFFQAGK------KKRYAGHIVWKEGQDVDDVDITGFEYKR 727

Query: 945  RGELKLIKVFQAELFDKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISE 1004
                 + K  Q E+ D+ +HG  +++    V  V  R+ D       D+     ID +  
Sbjct: 728  SDIAPITKNVQHEVIDRIVHGEDLDDVKRYVRGVIERFED------GDVD----IDEVGV 777

Query: 1005 SSTMSKSLADYGEQKSCAVTTARRLSDFLG 1034
               + K L +Y +  +  V  A+  +  LG
Sbjct: 778  PGGIGKRLGNY-DTDTAQVRGAKYANLLLG 806


>gi|324120718|dbj|BAJ78750.1| DNA polymerase delta catalytic subunit [Oyamia lugubris]
          Length = 1111

 Score = 51.6 bits (122), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 36/123 (29%), Positives = 53/123 (43%), Gaps = 29/123 (23%)

Query: 237 AEVHVCAFDIETTKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKP 296
           A   + +FDIE       FP+AD+D ++ I+ M+  QG                  T +P
Sbjct: 316 APFRILSFDIECAGRKGIFPEADHDPVIQIANMVVCQG------------------TAEP 357

Query: 297 EFEGYF-----------KVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETR 345
                F           +V + +NE E+L  W   ++EV P I   YN + FD P+L  R
Sbjct: 358 MIRNVFTLNTCAPIVGCQVLSYDNEREMLLKWSEFVREVDPDIITGYNINNFDLPYLINR 417

Query: 346 AAH 348
           A H
Sbjct: 418 AKH 420


>gi|395796413|ref|ZP_10475710.1| DNA polymerase II [Pseudomonas sp. Ag1]
 gi|395339501|gb|EJF71345.1| DNA polymerase II [Pseudomonas sp. Ag1]
          Length = 785

 Score = 51.6 bits (122), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 73/305 (23%), Positives = 121/305 (39%), Gaps = 56/305 (18%)

Query: 774  LQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPL---ELD 830
            L  A K I+N+FYG +   G R++   +A  +T  G +I++  R L+E  G  +   + D
Sbjct: 488  LSQALKIIMNAFYGVLGSSGCRFFDTRLASSITLRGHQIMRQTRELVEARGYEVIYGDTD 547

Query: 831  TDGIWCVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTY 890
            +  +W   P S  E+ T    DL + +   +          R    +++  L   +   Y
Sbjct: 548  STFVWLGSPHS-QEDATRIGLDLVQHVNTWW----------RERLQNEF-GLQSALELQY 595

Query: 891  ETHSECSIEFEVDGPYKAMILPA--SKEEGILIKKRYA--VFNDDGTLAEL-KGFEIKRR 945
            ETH            +   ++P     EEG   KKRYA  V   DG+   + KG E  R 
Sbjct: 596  ETH------------FSRFLMPTIRGAEEG--SKKRYAGLVTRADGSEEMVYKGLETVRS 641

Query: 946  GELKLIKVFQAELFDKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISES 1005
                L + FQ EL+ +  H    +              D + +  +     EL D +   
Sbjct: 642  DWSPLARQFQQELYQRIFHRQPHQ--------------DYVRDYVRRTLSGELDDLLIYR 687

Query: 1006 STMSKSLADYGEQKSCAVTTARRLSDFLGDTMVKDK----GLRCQYIVACE-PQGTPVSE 1060
              + + L DY E+       A RL+D   D   + +    G    Y+++   P+  P+  
Sbjct: 688  KRLRRQLGDY-ERNVPPHVRAARLADEYNDRQGRPRQYQNGGWISYVISVNGPE--PLEV 744

Query: 1061 RAVPV 1065
            R  P+
Sbjct: 745  RQAPI 749


>gi|294496641|ref|YP_003543134.1| replicative DNA polymerase I [Methanohalophilus mahii DSM 5219]
 gi|292667640|gb|ADE37489.1| replicative DNA polymerase I [Methanohalophilus mahii DSM 5219]
          Length = 918

 Score = 51.2 bits (121), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 73/296 (24%), Positives = 123/296 (41%), Gaps = 33/296 (11%)

Query: 770  LYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAK-IIQNARLLIEKIGKPLE 828
            + D+ QLA K +LNSFYGY     AR YS+ MAG VT  G + I +   ++  +IG  + 
Sbjct: 544  VLDATQLALKILLNSFYGYSGYARARLYSLGMAGSVTSIGRENIARTEEIVCSQIGS-VV 602

Query: 829  LDTDGIWCVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSK 888
            L  D ++        E     + D K  L+I Y     + D    +  D+    + P   
Sbjct: 603  LRNDEVYF-----RDEAGEIGSDDKKVNLSIVYG----DTDSVFVHCMDRDNRELSPDDL 653

Query: 889  TYETHSECS------IEFEVDGPYKAMILPASKEEGILIKKRYA--VFND-DGTLAE--- 936
            T E  +         +   +  P +      ++   ++ KKRYA  +F   +G   +   
Sbjct: 654  TLEESARVGSKVASLVTASLPDPMELEFEATARRVLLVAKKRYAQWLFEPAEGGWKDKIK 713

Query: 937  LKGFEIKRRGELKLIKVFQAELFDKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIA-D 995
            +KG E  RR   +L       + +  L    +E+    V    +R  +L      D+  D
Sbjct: 714  VKGLETVRRDWCELTSNMLNRVLEYVLKEGNVEKAVEHVKTTVDRVRNL------DVTRD 767

Query: 996  SELIDYISESSTMSKSLADYGEQKSCAVTTARRLSDFLGDTMVKDKGLRCQYIVAC 1051
            S++ID +  + T SKS + Y + K   +T   ++    G  M    G R  +++  
Sbjct: 768  SDIIDDLVLTKTFSKSPSSY-KNKQPHLTVVEKIEQRTG--MRPSIGERIPFVIVA 820


>gi|324120730|dbj|BAJ78756.1| DNA polymerase delta catalytic subunit [Reticulitermes speratus]
          Length = 1033

 Score = 51.2 bits (121), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 37/133 (27%), Positives = 55/133 (41%), Gaps = 29/133 (21%)

Query: 237 AEVHVCAFDIETTKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKP 296
           A   + +FDIE       FP+ ++D ++ I+ M+  QG                   P+P
Sbjct: 239 APFRILSFDIECAGRKGIFPEPEHDPVIQIANMVVQQG------------------QPEP 280

Query: 297 EFEGYF-----------KVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETR 345
                F           +V +   E ELL  W A ++EV P +   YN + FD+P+L  R
Sbjct: 281 FLRNVFTLNTCAPIVGCQVLSFTEERELLEKWAAFVREVDPDVITGYNINNFDFPYLINR 340

Query: 346 AAHHGFKMSEELG 358
           A H   K    LG
Sbjct: 341 ANHLKVKNFTYLG 353


>gi|315127104|ref|YP_004069107.1| DNA polymerase II [Pseudoalteromonas sp. SM9913]
 gi|315015618|gb|ADT68956.1| DNA polymerase II [Pseudoalteromonas sp. SM9913]
          Length = 781

 Score = 51.2 bits (121), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 50/192 (26%), Positives = 78/192 (40%), Gaps = 23/192 (11%)

Query: 774 LQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDG 833
           L  A K I+NS YG +  KG R+Y   ++  +T  G +I+Q  R  IE  G         
Sbjct: 489 LSQAIKIIMNSLYGVLGSKGCRFYDPRLSSSITLRGHEIMQTTRKWIEAQG--------- 539

Query: 834 IWCVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETH 893
            + V+ G     F    +D   +      C ++      ++ N  +Q     + + Y+ H
Sbjct: 540 -FEVIYGDTDSTFVKLCEDKSPEQCNEIGCQLV------HHINTMWQA---DLKQRYDLH 589

Query: 894 SECSIEFEVDGPYKAMILPASKEEGILIKKRYA--VFNDDGTLAELKGFEIKRRGELKLI 951
           S   IEFE    Y    +P  + +    KKRY   V  ++      KG E  R    +  
Sbjct: 590 SYLEIEFETH--YSPFFMPTIRGKKTGSKKRYVGQVTKNNEKKLVFKGMETIRSDWTEFA 647

Query: 952 KVFQAELFDKFL 963
           + FQ ELF+   
Sbjct: 648 QEFQTELFETLF 659


>gi|68066823|ref|XP_675385.1| hypothetical protein [Plasmodium berghei strain ANKA]
 gi|56494541|emb|CAH93658.1| hypothetical protein PB000103.00.0 [Plasmodium berghei]
          Length = 125

 Score = 51.2 bits (121), Expect = 0.006,   Method: Composition-based stats.
 Identities = 26/88 (29%), Positives = 43/88 (48%), Gaps = 2/88 (2%)

Query: 1890 WHCAMPQCGQPYDREVMENALLQIVRQRERLYHLQDLVCIRCNQVKAAHLAEQCACAGSF 1949
            W C    C   YD E +E  +L  ++     Y+ QD+VC  CN +K+ H    C C  +F
Sbjct: 28   WLCK--NCNSKYDNEFIETKILSHLQDTFDAYNAQDIVCNNCNAIKSFHRRAICKCGKTF 85

Query: 1950 RCKEDASDFRSKMQIFLNIANRQGFQLL 1977
              + + S++   ++I  ++AN     LL
Sbjct: 86   VPRLEISNWVQTLEIMESLANMLNMPLL 113


>gi|10799897|emb|CAC12848.1| DNA polymerase [Thermococcus chitonophagus]
          Length = 195

 Score = 51.2 bits (121), Expect = 0.006,   Method: Composition-based stats.
 Identities = 58/204 (28%), Positives = 92/204 (45%), Gaps = 28/204 (13%)

Query: 238 EVHVCAFDIETTKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPE 297
           E+ + AFDIET  L  +  +     I+MISY  D +G  +I  + V     DL Y     
Sbjct: 13  ELKLLAFDIET--LYHEGEEFAKGPIIMISYA-DEEGTKVITWKKV-----DLPY----- 59

Query: 298 FEGYFKVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKM---- 353
                 V  V++E E+++ +   ++E  P + +TYNGD FD P+L  RA   G K+    
Sbjct: 60  ------VEVVSSEREMIKRFLKVIREKDPDVIITYNGDSFDLPYLVKRAERLGIKLPLGR 113

Query: 354 -SEELGFQCDKNQGECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNP 412
              E   Q   +      K   H D +  ++R   LP  +  L+AV +A  G    +V  
Sbjct: 114 DGSEPKMQRLGDMTAVEIKGRIHFDLYHVIRRTINLP--TYTLEAVYEAIFGKPKEKVYA 171

Query: 413 EDMVRFAKEKP--QMMASYSVSDA 434
            ++    +     + +A YS+ DA
Sbjct: 172 HEIAEAWETGKGLERVARYSMEDA 195


>gi|119178034|ref|XP_001240726.1| hypothetical protein CIMG_07889 [Coccidioides immitis RS]
 gi|392867311|gb|EAS29457.2| DNA polymerase (pol2) [Coccidioides immitis RS]
          Length = 1463

 Score = 51.2 bits (121), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 54/209 (25%), Positives = 88/209 (42%), Gaps = 49/209 (23%)

Query: 768  VVLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIG-KP 826
            + L+D+ QLA K   NS YG +    +R+Y+  +A + T+ G +I+QN + L EK   + 
Sbjct: 939  LALWDTKQLALKLTANSMYGCLGYTQSRFYARPLAMLTTFKGREILQNTKELAEKNQLRV 998

Query: 827  LELDTDGIWCVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPV 886
            +  DTD +                 ++++ L +      L         ND Y+ L    
Sbjct: 999  IYGDTDSVM----------INTNVDNMEEALKVGNEFKRL--------VNDSYKLL---- 1036

Query: 887  SKTYETHSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFN---DDGTLA---ELKGF 940
                        E +VD  ++ ++L A        KK+YA  N    DG      E+KG 
Sbjct: 1037 ------------EIDVDNVFRRLLLHA--------KKKYAAINMTEVDGKYVDHLEVKGL 1076

Query: 941  EIKRRGELKLIKVFQAELFDKFLHGSTIE 969
            ++KRR    L K   ++L  + L G   E
Sbjct: 1077 DMKRREYCTLSKEVSSKLLTEILSGDDTE 1105


>gi|424922446|ref|ZP_18345807.1| DNA polymerase elongation subunit [Pseudomonas fluorescens R124]
 gi|404303606|gb|EJZ57568.1| DNA polymerase elongation subunit [Pseudomonas fluorescens R124]
          Length = 787

 Score = 51.2 bits (121), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 55/199 (27%), Positives = 83/199 (41%), Gaps = 34/199 (17%)

Query: 774 LQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPL---ELD 830
           L  A K I+N+FYG +   G R++   +A  +T  G +I+   R LIE  G  +   + D
Sbjct: 490 LSQALKIIMNAFYGVLGSSGCRFFDTRLASSITLRGHEIMLRTRQLIEAQGHAVIYGDTD 549

Query: 831 TDGIWCVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTY 890
           +  +W   P              ++   I    V    D  R +  ++Y  L   +   Y
Sbjct: 550 STFVWLRRP-----------HGQEEAAQIGQALVKHVNDWWREHVREEY-GLQSALELQY 597

Query: 891 ETHSECSIEFEVDGPYKAMILPASK--EEGILIKKRYA--VFNDDGTLAEL-KGFEIKRR 945
           ETH            YK  ++P  +  EEG   KKRYA  V   DG+   + KG E  R 
Sbjct: 598 ETH------------YKRFLMPTIRGAEEG--SKKRYAGLVTRADGSEEMVYKGLETVRT 643

Query: 946 GELKLIKVFQAELFDKFLH 964
               L + FQ EL+++   
Sbjct: 644 DWSLLARQFQQELYERIFQ 662


>gi|218698482|ref|YP_002406111.1| DNA polymerase II [Escherichia coli IAI39]
 gi|386622472|ref|YP_006142200.1| DNA polymerase II [Escherichia coli O7:K1 str. CE10]
 gi|218368468|emb|CAR16204.1| DNA polymerase II [Escherichia coli IAI39]
 gi|349736210|gb|AEQ10916.1| DNA polymerase II [Escherichia coli O7:K1 str. CE10]
          Length = 783

 Score = 51.2 bits (121), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 57/233 (24%), Positives = 89/233 (38%), Gaps = 41/233 (17%)

Query: 741 LNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHKCILNSFYGYVMRKGARWYSME 800
           +  +W G+  EAK  GN                L  A K I+N+FYG +     R++   
Sbjct: 470 VTNIWHGR-DEAKRQGNK--------------PLSQALKIIMNAFYGVLGTTACRFFDPR 514

Query: 801 MAGVVTYTGAKIIQNARLLIEKIG-KPLELDTDGIWCVLPGSFPENFTFKTKDLKKKLTI 859
           +A  +T  G +I++  + LIE  G   +  DTD  +  L G+  E    K          
Sbjct: 515 LASSITMRGHQIMRQTKALIEAQGYDVIYGDTDSTFVWLKGAHSEEEAAKIGR------- 567

Query: 860 SYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEFEVDGPYKAMILPASKEEGI 919
               ++ +V+     T  Q Q L   +   YETH            +   ++P  +    
Sbjct: 568 ---ALVQHVNTWWAETLQQ-QRLTSALELEYETH------------FCRFLMPTIRGADT 611

Query: 920 LIKKRYAVFNDDGTLAEL--KGFEIKRRGELKLIKVFQAELFDKFLHGSTIEE 970
             KKRYA    +G    +  KG E  R     L + FQ EL+ +       +E
Sbjct: 612 GSKKRYAGLIQEGDKQRMVFKGLETVRTDWTPLAQQFQQELYLRIFRNEPYQE 664


>gi|299533612|ref|ZP_07046986.1| DNA polymerase II [Comamonas testosteroni S44]
 gi|298718334|gb|EFI59317.1| DNA polymerase II [Comamonas testosteroni S44]
          Length = 672

 Score = 51.2 bits (121), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 54/217 (24%), Positives = 88/217 (40%), Gaps = 35/217 (16%)

Query: 772 DSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIG-KPLELD 830
           + L  A K ++NSF G +     R+++ ++   +T  G ++++  R L+E+ G + +  D
Sbjct: 373 EPLSQALKLVMNSFAGVLGASECRFFNPDLISAITLRGHEMVKLTRDLVEERGYEVIYGD 432

Query: 831 TDG--IWCVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSK 888
           TD   IW   P S  E +    K                  +AR+      QTL      
Sbjct: 433 TDSIFIWLKRPHSTEEAYAVAAK------------------LARDINAWWIQTL------ 468

Query: 889 TYETHSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAE---LKGFEIKRR 945
             E   +  +E E D  YK   +P  +   +  KKRYA  + D    E    +G E+ R 
Sbjct: 469 QQEQGLKSFLEIEFDTYYKKFFMPTIRGSDVGSKKRYAGLSVDAAGNESMIYRGLEMARS 528

Query: 946 GELKLIKVFQAELFDKFLHGS-----TIEECYSAVAA 977
               L + FQ  L  +   G+      IE  +S +A 
Sbjct: 529 DWTPLARQFQEGLLSRVFQGAPYREFVIEYAHSTLAG 565


>gi|303315657|ref|XP_003067833.1| DNA polymerase alpha catalytic subunit, putative [Coccidioides
            posadasii C735 delta SOWgp]
 gi|240107509|gb|EER25688.1| DNA polymerase alpha catalytic subunit, putative [Coccidioides
            posadasii C735 delta SOWgp]
          Length = 1463

 Score = 51.2 bits (121), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 54/209 (25%), Positives = 88/209 (42%), Gaps = 49/209 (23%)

Query: 768  VVLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIG-KP 826
            + L+D+ QLA K   NS YG +    +R+Y+  +A + T+ G +I+QN + L EK   + 
Sbjct: 939  LALWDTKQLALKLTANSMYGCLGYTQSRFYARPLAMLTTFKGREILQNTKELAEKNQLRV 998

Query: 827  LELDTDGIWCVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPV 886
            +  DTD +                 ++++ L +      L         ND Y+ L    
Sbjct: 999  IYGDTDSVM----------INTNVDNMEEALKVGNEFKRL--------VNDSYKLL---- 1036

Query: 887  SKTYETHSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFN---DDGTLA---ELKGF 940
                        E +VD  ++ ++L A        KK+YA  N    DG      E+KG 
Sbjct: 1037 ------------EIDVDNVFRRLLLHA--------KKKYAAINMTEVDGKYVDHLEVKGL 1076

Query: 941  EIKRRGELKLIKVFQAELFDKFLHGSTIE 969
            ++KRR    L K   ++L  + L G   E
Sbjct: 1077 DMKRREYCTLSKEVSSKLLTEILSGDDTE 1105


>gi|422783171|ref|ZP_16835955.1| DNA polymerase B protein [Escherichia coli TW10509]
 gi|323975773|gb|EGB70869.1| DNA polymerase B protein [Escherichia coli TW10509]
          Length = 783

 Score = 51.2 bits (121), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 57/233 (24%), Positives = 89/233 (38%), Gaps = 41/233 (17%)

Query: 741 LNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHKCILNSFYGYVMRKGARWYSME 800
           +  +W G+  EAK  GN                L  A K I+N+FYG +     R++   
Sbjct: 470 VTNIWHGR-DEAKRQGNK--------------PLSQALKIIMNAFYGVLGTTACRFFDPR 514

Query: 801 MAGVVTYTGAKIIQNARLLIEKIG-KPLELDTDGIWCVLPGSFPENFTFKTKDLKKKLTI 859
           +A  +T  G +I++  + LIE  G   +  DTD  +  L G+  E    K          
Sbjct: 515 LASSITMRGHQIMRQTKALIEAQGYDVIYGDTDSTFVWLKGAHSEEEAAKIGR------- 567

Query: 860 SYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEFEVDGPYKAMILPASKEEGI 919
               ++ +V+     T  Q Q L   +   YETH            +   ++P  +    
Sbjct: 568 ---ALVQHVNAWWAETLQQ-QRLTSALELEYETH------------FCRFLMPTIRGADT 611

Query: 920 LIKKRYAVFNDDGTLAEL--KGFEIKRRGELKLIKVFQAELFDKFLHGSTIEE 970
             KKRYA    +G    +  KG E  R     L + FQ EL+ +       +E
Sbjct: 612 GSKKRYAGLIQEGDKQRMVFKGLETVRTDWTPLAQQFQQELYLRIFRNEPYQE 664


>gi|452210573|ref|YP_007490687.1| Archaeal DNA polymerase I [Methanosarcina mazei Tuc01]
 gi|452100475|gb|AGF97415.1| Archaeal DNA polymerase I [Methanosarcina mazei Tuc01]
          Length = 926

 Score = 51.2 bits (121), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 103/432 (23%), Positives = 173/432 (40%), Gaps = 55/432 (12%)

Query: 84  FRPYFYAATKEKMEMDVEAYLRRRYESQIADIEILEKEDLDLKNHLSGLHKS---YLKIS 140
           F PYFY   K   ++   A L +    Q+  +EI+EK +        G  K+    L+I+
Sbjct: 33  FEPYFY--LKASGDLHAVARLIKDTFEQVKKVEIIEKFEP------VGYQKTKTKMLRIT 84

Query: 141 FDTVQQLMDVKKDLLHVVERNQAKFDAAEAYES-ILTGKREQRPQDFLDCI---VDLREY 196
               + + +++ ++L + +  +A+ D  + YES IL   R    +D    +    + +  
Sbjct: 85  TSLPRDVPEIRDEVLKIQDVLKAEGDW-QVYESDILFRNRFLIDRDLGGMVWISAEGKPV 143

Query: 197 DVPYHIRFAIDNDVRCGQWY-DVSISSTGPLLEKRVDLLQRAEVHVCAFDIETTKLPLKF 255
           D   ++R     + RC ++  D SI   G  L KRV+ L  A +   +FDIE   L    
Sbjct: 144 DPARYLRAGSAGNSRCEKFACDTSI--LGSEL-KRVENLTIAPLKYLSFDIECLPLDGGM 200

Query: 256 PDADYDIIMMISYMLD----GQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVTNVNNEI 311
           P  D   I+MIS+  +    G   LI+                KP       V    +E 
Sbjct: 201 PSPDVSPIIMISFSFEPAYKGHKTLIL--------------LAKPADGMNGDVLPCKDET 246

Query: 312 ELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKM----------SEELGFQC 361
           ++L  +F  + E  P I   YN   FD P++  R      K              +G++ 
Sbjct: 247 DMLNRFFEIICEYDPDIVAGYNHQDFDIPYITDRVKALNAKGENINPVVGRDGSHIGYRR 306

Query: 362 DKNQGECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRF--- 418
                    K    +D    V+R   L Q +  L+AV+K  L  + L+V P +M      
Sbjct: 307 FGLITRTEVKGRVVVDALPLVRRAFSLKQYT--LRAVSKELLSREKLDVPPLEMEEHWND 364

Query: 419 AKEKPQMMASYSVSDA-VATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLM 477
           + EK      Y+  DA +A   +    +     +LA +      E++  G  ++ E LL+
Sbjct: 365 SGEKFLKFVDYARRDAELALELVLNLRLLDKYIALAQVSGSLLQEIVDGGQTSMVETLLL 424

Query: 478 VQ-AYKANVICP 488
            +   +  VI P
Sbjct: 425 REFGLRDRVILP 436



 Score = 48.5 bits (114), Expect = 0.041,   Method: Compositional matrix adjust.
 Identities = 73/325 (22%), Positives = 137/325 (42%), Gaps = 33/325 (10%)

Query: 738  YKGL-NKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHKCILNSFYGYVMRKGARW 796
            Y+G+   + +  L++   +   +++   ++   + D+ QLA K +LNSFYGY     AR 
Sbjct: 517  YRGIVPSILEDLLNQRGETKKRMRLTSDKNEYRVLDATQLAIKILLNSFYGYSGYARARL 576

Query: 797  YSMEMAGVVTYTGAKIIQNARLLIEK-IGKPLELDTDGIWCVLPGSFPENFTFKTKDLKK 855
            YS+ +A  VT  G   I N R LI   IGK +  D+  ++        E      +D   
Sbjct: 577  YSLTLANAVTSFGRSNILNTRDLINNDIGKIVLRDSAALF------LEEAGEISPQDRVI 630

Query: 856  KLTISYP---CVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEFEVDGPYKAMILP 912
             L+++Y     V ++     + + +    + + +S+         +E E +   K  +L 
Sbjct: 631  DLSVAYGDTDSVFVHCRSEGDLSLEDVSLVGNRLSQIVSASLPDPMELEFEAIAKRALLI 690

Query: 913  ASKEEGILIKKRYAVF----NDDG--TLAELKGFEIKRRGELKLIKVFQAELFDKFLHGS 966
            A        KKRYA++     + G     ++KG E  RR   +L  +   E+    L   
Sbjct: 691  A--------KKRYALWLFEPRNSGWENKIKVKGMETVRRDWCELTSITLNEVLKLVLIKG 742

Query: 967  TIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLADYGEQKSCAVTTA 1026
             ++     V  V +   +L  + GKD     +I+ +  + T+++    Y + K   +T A
Sbjct: 743  DVDGAVEHVRNVVSDVRNL--DPGKDAG---IIEKLVLTRTLTRRTDSY-KNKQPHLTVA 796

Query: 1027 RRLSDFLGDTMVKDKGLRCQYIVAC 1051
              L    G  ++   G R  +++  
Sbjct: 797  ENLKKRTG--VMPSIGTRIPFVIVA 819


>gi|354596129|ref|ZP_09014146.1| DNA polymerase B region [Brenneria sp. EniD312]
 gi|353674064|gb|EHD20097.1| DNA polymerase B region [Brenneria sp. EniD312]
          Length = 788

 Score = 51.2 bits (121), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 55/227 (24%), Positives = 92/227 (40%), Gaps = 50/227 (22%)

Query: 741 LNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHKCILNSFYGYVMRKGARWYSME 800
           +  +W+G+   AK +GN                L  A K I+N+FYG +   G R++   
Sbjct: 474 VEHIWQGR-EAAKRTGNK--------------PLSQALKIIMNAFYGVLGASGCRFFDPR 518

Query: 801 MAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLPGSFPENFTFKTKDLKKKLTIS 860
           +A  +T  G +I++  R LIE+ G          + V+ G     F +    L++  T  
Sbjct: 519 LASSITLRGHEIMRKTRELIEQQG----------YQVIYGDTDSTFVW----LRRAHTQE 564

Query: 861 YPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSE------CSIEFEVDGPYKAMILPAS 914
               + N             TLV  V++ + TH +       ++E E +  ++  ++P  
Sbjct: 565 EAARIGN-------------TLVRQVNQWWRTHLQQTHGLTSALELEFETHFRRFLMPTI 611

Query: 915 KEEGILIKKRYAVFND--DGTLAELKGFEIKRRGELKLIKVFQAELF 959
           +      KKRYA   D   G     KG E  R     L + FQ +L+
Sbjct: 612 RGAEQGSKKRYAGMIDTPQGEKMIFKGLETVRTDWTPLAQHFQQQLY 658


>gi|422806728|ref|ZP_16855159.1| DNA polymerase B protein [Escherichia fergusonii B253]
 gi|324112539|gb|EGC06516.1| DNA polymerase B protein [Escherichia fergusonii B253]
          Length = 783

 Score = 51.2 bits (121), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 57/233 (24%), Positives = 89/233 (38%), Gaps = 41/233 (17%)

Query: 741 LNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHKCILNSFYGYVMRKGARWYSME 800
           +  +W G+  EAK  GN                L  A K I+N+FYG +     R++   
Sbjct: 470 VTNIWHGR-DEAKRQGNK--------------PLSQALKIIMNAFYGVLGTTACRFFDPR 514

Query: 801 MAGVVTYTGAKIIQNARLLIEKIG-KPLELDTDGIWCVLPGSFPENFTFKTKDLKKKLTI 859
           +A  +T  G +I++  + LIE  G   +  DTD  +  L G+  E    K          
Sbjct: 515 LASSITMRGHQIMRQTKALIEAQGYDVIYGDTDSTFVWLKGAHSEEEAAKIGR------- 567

Query: 860 SYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEFEVDGPYKAMILPASKEEGI 919
               ++ +V+     T  Q Q L   +   YETH            +   ++P  +    
Sbjct: 568 ---ALVQHVNAWWAETLQQ-QRLTSALELEYETH------------FCRFLMPTIRGADT 611

Query: 920 LIKKRYAVFNDDGTLAEL--KGFEIKRRGELKLIKVFQAELFDKFLHGSTIEE 970
             KKRYA    +G    +  KG E  R     L + FQ EL+ +       +E
Sbjct: 612 GSKKRYAGLIQEGDKQRMVFKGLETVRTDWTPLAQQFQQELYLRIFRNEPYQE 664



 Score = 40.8 bits (94), Expect = 7.9,   Method: Compositional matrix adjust.
 Identities = 55/241 (22%), Positives = 99/241 (41%), Gaps = 27/241 (11%)

Query: 311 IELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDKNQGECRA 370
           +E L  WFA+     P + + +N   FD   L+  A    +++   LG   D ++ E R 
Sbjct: 205 LEKLNAWFANHD---PDVIIGWNVVQFDLRMLQKHAER--YRIPLRLG--RDNSELEWRE 257

Query: 371 KFACHLDCFAWVK-----------RDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMV--- 416
               +   FA  K           + ++    S  L+ V +  LG      NP D +   
Sbjct: 258 HGFKNGVFFAQAKGRLIIDGIEALKSAFWNFSSFSLETVAQELLGEGKSIDNPWDRMDEI 317

Query: 417 --RFAKEKPQMMASYSVSDA-VATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCE 473
             RFA++KP  +A+Y++ D  + T   + T + PF+   AT+  +  D     GS     
Sbjct: 318 DRRFAEDKP-ALATYNLKDCELVTQIFHKTEIMPFLLERATVNGLPVDR--HGGSVAAFG 374

Query: 474 MLLMVQAYKANVICPNKHQSDPEKFYRNHLLESETYIGGHVECLESGVFRSDLPTSFKLD 533
            L   + ++A  + PN  +  P      ++++S   +   V  L+       +  +F +D
Sbjct: 375 HLYFPRMHRAGYVAPNLGEVPPHASPGGYVMDSRPGLYDSVLVLDYKSLYPSIIRTFLID 434

Query: 534 P 534
           P
Sbjct: 435 P 435


>gi|397780018|ref|YP_006544491.1| DNA polymerase I [Methanoculleus bourgensis MS2]
 gi|396938520|emb|CCJ35775.1| DNA polymerase I [Methanoculleus bourgensis MS2]
          Length = 802

 Score = 51.2 bits (121), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 64/221 (28%), Positives = 91/221 (41%), Gaps = 37/221 (16%)

Query: 769 VLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIG-KPL 827
           VLYD  Q   K I+NS+YG       R Y  E+   VT  G  II++ R +I  +G   L
Sbjct: 490 VLYDLQQNVLKVIMNSYYGVSGYTRFRLYDREIGSAVTSVGRAIIKHTRDVITDLGYTVL 549

Query: 828 ELDTDGIWC-VLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPV 886
             DTD     V PGS  E    K + ++ +L  SY       D AR              
Sbjct: 550 YGDTDSCMVEVPPGSLEETIA-KARAIEARLNASYG------DFARRELA---------A 593

Query: 887 SKTYETHSECSIEFEVDGPYKAMILPASKEEGILIKKRYA---VFNDDGTLAELK--GFE 941
            K Y      SI+FE           A K      KKRYA   V+ +   + E+   GFE
Sbjct: 594 DKHY-----FSIKFE---KVYRRFFQAGK------KKRYAGHLVWKEGKDVDEVDVVGFE 639

Query: 942 IKRRGELKLIKVFQAELFDKFLHGSTIEECYSAVAAVANRW 982
           I+R    ++ +  Q ++ +  L G   E+  + +  V  R+
Sbjct: 640 IRRSDSPQVTREVQHDVLEMILRGDAFEDVQAYLRDVIRRY 680


>gi|320034062|gb|EFW16008.1| DNA polymerase alpha catalytic subunit [Coccidioides posadasii str.
            Silveira]
          Length = 1449

 Score = 51.2 bits (121), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 54/209 (25%), Positives = 88/209 (42%), Gaps = 49/209 (23%)

Query: 768  VVLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIG-KP 826
            + L+D+ QLA K   NS YG +    +R+Y+  +A + T+ G +I+QN + L EK   + 
Sbjct: 925  LALWDTKQLALKLTANSMYGCLGYTQSRFYARPLAMLTTFKGREILQNTKELAEKNQLRV 984

Query: 827  LELDTDGIWCVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPV 886
            +  DTD +                 ++++ L +      L         ND Y+ L    
Sbjct: 985  IYGDTDSVM----------INTNVDNMEEALKVGNEFKRL--------VNDSYKLL---- 1022

Query: 887  SKTYETHSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFN---DDGTLA---ELKGF 940
                        E +VD  ++ ++L A        KK+YA  N    DG      E+KG 
Sbjct: 1023 ------------EIDVDNVFRRLLLHA--------KKKYAAINMTEVDGKYVDHLEVKGL 1062

Query: 941  EIKRRGELKLIKVFQAELFDKFLHGSTIE 969
            ++KRR    L K   ++L  + L G   E
Sbjct: 1063 DMKRREYCTLSKEVSSKLLTEILSGDDTE 1091


>gi|448738593|ref|ZP_21720616.1| DNA-directed DNA polymerase [Halococcus thailandensis JCM 13552]
 gi|445801477|gb|EMA51811.1| DNA-directed DNA polymerase [Halococcus thailandensis JCM 13552]
          Length = 907

 Score = 51.2 bits (121), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 66/270 (24%), Positives = 105/270 (38%), Gaps = 45/270 (16%)

Query: 771  YDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLEL- 829
            +D  Q A K I+NS YG +  +  R Y  EM   VT TG ++I++      ++   +   
Sbjct: 570  FDRQQAAVKVIMNSLYGVLGWERFRLYDREMGAAVTATGREVIEHTEDAANELDYQVAYG 629

Query: 830  DTDGIWCVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKT 889
            DTD +   L G           D+ K+  I     +       ++ ND Y    D  +  
Sbjct: 630  DTDSVMLELGG-----------DVAKESAIEQAGTI------ESHINDSY----DAFASE 668

Query: 890  YETHSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVF-----NDDGTLAELKGFEIKR 944
                 E   E E +  Y+     A K      KKRYA         D    ++ GFE KR
Sbjct: 669  QLGADEHRFEIEFEKLYR-RFFQAGK------KKRYAGHIVWKEGQDVDDVDITGFEYKR 721

Query: 945  RGELKLIKVFQAELFDKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISE 1004
                 + K  Q ++ D+ +HG  +++    V  V  R+ D       D+     ID +  
Sbjct: 722  SDIAPITKNVQHDVIDRIVHGEDLDDVKRYVREVIERFED------GDVD----IDEVGV 771

Query: 1005 SSTMSKSLADYGEQKSCAVTTARRLSDFLG 1034
               + K L +Y +  +  V  A+  +  LG
Sbjct: 772  PGGIGKRLGNY-DTDTAQVRGAKYANLLLG 800


>gi|9635382|ref|NP_059280.1| ORF132 [Xestia c-nigrum granulovirus]
 gi|6175776|gb|AAF05246.1|AF162221_132 ORF132 [Xestia c-nigrum granulovirus]
 gi|2827166|gb|AAC06350.1| DNA polymerase [Xestia c-nigrum granulovirus]
          Length = 1098

 Score = 51.2 bits (121), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 64/301 (21%), Positives = 130/301 (43%), Gaps = 34/301 (11%)

Query: 193 LREYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLLEKRVDLLQRAEVHVCAFDIETTKLP 252
           L E D    I   I ++V C Q   +S  +  P+ +    L +  +  V ++D+ET    
Sbjct: 168 LYEGDCIKFISEVIVDNVGCCQNVCMSDIAMVPIDQ----LTESIDSIVASYDLETFTNG 223

Query: 253 LKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIE--DLE--YTPKPEFEGYFKVTNVN 308
            +  + D D I+ I+  +      ++ R C+   ++  DL   YT     +G   V   N
Sbjct: 224 FQLSNPDTDPIITIALTIKRHNNQLL-RYCLINSVQRPDLSDPYTQVDNVDGEAVVVPFN 282

Query: 309 NEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRA------------------AHHG 350
           NE +++ +++  +    P   + YNGD FD P+L  RA                      
Sbjct: 283 NERDMIVMFYKMLTLANPDEVIDYNGDNFDLPYLIKRAKILCIDSNIIRRYDLPPTTFRV 342

Query: 351 FKMSEELGFQCDKNQGECRAKFACHLDCFAWVKRD-SYLPQGSQGLKAVTKAKLGYDPLE 409
           +K++ + G+  + +       +  H+D + ++K         +  L  V    LG   +E
Sbjct: 343 YKINTKFGYGFNSHS----MVYYNHVDLYQYIKNTLDASKMENMKLDTVANFYLGVGKVE 398

Query: 410 VNPEDMVRFAKE-KPQMMASYSVSDAVATYYLY-MTYVHPFIFSLATIIPMSPDEVLRKG 467
           ++ ++M++  KE K   +  Y++ D V    ++    V   +++ ++I+ +S D+ L++ 
Sbjct: 399 LSVKEMMQLYKEGKFGKIVKYNIRDTVLPVDIFNKCQVANRLYADSSIMSLSRDDYLKRI 458

Query: 468 S 468
           S
Sbjct: 459 S 459


>gi|324120726|dbj|BAJ78754.1| DNA polymerase delta catalytic subunit [Tenodera aridifolia]
          Length = 1030

 Score = 51.2 bits (121), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 47/176 (26%), Positives = 76/176 (43%), Gaps = 29/176 (16%)

Query: 195 EYDVPYHIRFAIDNDV--------RCGQWYDVSISSTGPLLEKRVDLL------------ 234
           E +V + IRF +D D+          G W   S S+     +   D+             
Sbjct: 172 ESNVDFDIRFMVDTDIVGCSWVELPAGSWKLRSPSTYVSRCQIETDVSWEALISHQPEGE 231

Query: 235 --QRAEVHVCAFDIETTKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEY 292
             + A   + +FDIE       FP+ ++D ++ I+ M+  QG    ++E    ++  L+ 
Sbjct: 232 WSKVAPFRILSFDIECAGRKGVFPEPEHDPVIQIANMVIRQG----SKEPFIRNVFTLD- 286

Query: 293 TPKPEFEGYFKVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAH 348
           T  P      +V +   E E+L  W A ++EV P I   YN + FD P+L  RA H
Sbjct: 287 TCAPIIGS--QVLSFAKESEMLEKWAAFVREVDPDILTGYNINNFDIPYLINRANH 340


>gi|194434427|ref|ZP_03066689.1| DNA polymerase II [Shigella dysenteriae 1012]
 gi|417670526|ref|ZP_12320028.1| DNA polymerase II [Shigella dysenteriae 155-74]
 gi|194417343|gb|EDX33450.1| DNA polymerase II [Shigella dysenteriae 1012]
 gi|332097906|gb|EGJ02879.1| DNA polymerase II [Shigella dysenteriae 155-74]
          Length = 783

 Score = 51.2 bits (121), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 57/233 (24%), Positives = 87/233 (37%), Gaps = 41/233 (17%)

Query: 741 LNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHKCILNSFYGYVMRKGARWYSME 800
           +  +W G+  EAK  GN                L  A K I+N+FYG +     R++   
Sbjct: 470 VTNIWHGR-DEAKRQGNK--------------PLSQALKIIMNAFYGVLGTTACRFFDPR 514

Query: 801 MAGVVTYTGAKIIQNARLLIEKIG-KPLELDTDGIWCVLPGSFPENFTFKTKDLKKKLTI 859
           +A  +T  G +I++  + LIE  G   +  DTD  +  L G+  E    K      +   
Sbjct: 515 LASSITMRGHQIMRQTKALIEAQGYDVIYGDTDSTFVWLKGAHSEEEAAKIGRALVQHVN 574

Query: 860 SYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEFEVDGPYKAMILPASKEEGI 919
           S+    L           Q Q L   +   YETH            +   ++P  +    
Sbjct: 575 SWWAETL-----------QKQRLTSALELEYETH------------FCRFLMPTIRGADT 611

Query: 920 LIKKRYAVFNDDGTLAEL--KGFEIKRRGELKLIKVFQAELFDKFLHGSTIEE 970
             KKRYA    +G    +  KG E  R     L + FQ EL+ +       +E
Sbjct: 612 GSKKRYAGLIQEGDKQRMVFKGLETVRTDWTPLAQQFQQELYLRIFRNEPYQE 664



 Score = 41.2 bits (95), Expect = 6.5,   Method: Compositional matrix adjust.
 Identities = 55/241 (22%), Positives = 99/241 (41%), Gaps = 27/241 (11%)

Query: 311 IELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDKNQGECRA 370
           +E L  WFA+     P + + +N   FD   L+  A    +++   LG   D ++ E R 
Sbjct: 205 LEKLNAWFANHD---PDVIIGWNVVQFDLRMLQKHAER--YRLPLRLG--RDNSELEWRE 257

Query: 371 KFACHLDCFAWVK-----------RDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMV--- 416
               +   FA  K           + ++    S  L+ V +  LG      NP D +   
Sbjct: 258 HGFKNSVFFAQAKGRLIIDGIEALKSAFWNFSSFSLETVAQELLGEGKSIDNPWDRMDEI 317

Query: 417 --RFAKEKPQMMASYSVSDA-VATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCE 473
             RFA++KP  +A+Y++ D  + T   + T + PF+   AT+  +  D     GS     
Sbjct: 318 DRRFAEDKP-ALATYNLKDCELVTQIFHKTEIMPFLLERATVNGLPVDR--HGGSVAAFG 374

Query: 474 MLLMVQAYKANVICPNKHQSDPEKFYRNHLLESETYIGGHVECLESGVFRSDLPTSFKLD 533
            L   + ++A  + PN  +  P      ++++S   +   V  L+       +  +F +D
Sbjct: 375 HLYFPRMHRAGYVAPNLGEVPPHASPGGYVMDSRPGLYDSVLVLDYKSLYPSIIRTFLID 434

Query: 534 P 534
           P
Sbjct: 435 P 435


>gi|392589707|gb|EIW79037.1| hypothetical protein CONPUDRAFT_126817 [Coniophora puteana RWD-64-598
            SS2]
          Length = 1433

 Score = 51.2 bits (121), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 56/205 (27%), Positives = 90/205 (43%), Gaps = 50/205 (24%)

Query: 771  YDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLEL- 829
            YD  Q A K   NS YG +  + +R+Y+  +A + T+ G +I+ + R L E +   L++ 
Sbjct: 924  YDIKQQALKLTANSMYGCLGFEYSRFYARPLAALTTFKGREILTHTRELAESLQ--LDVV 981

Query: 830  --DTDGIWCVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVS 887
              DTD ++         N T    +L + L IS        +  +   ND+Y+ L     
Sbjct: 982  YGDTDSVFVN------SNVT----ELSEALKIS--------NEFKKAVNDRYRLL----- 1018

Query: 888  KTYETHSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFN-DDG--TLAELKGFEIKR 944
                       E ++DG +  ++L        L KK+YA    +DG  T  E+KG ++KR
Sbjct: 1019 -----------EIDLDGVFARLLL--------LQKKKYAAIKVEDGSRTSTEIKGLDMKR 1059

Query: 945  RGELKLIKVFQAELFDKFLHGSTIE 969
            R    L K     + D+ L G   E
Sbjct: 1060 REYCALSKNVSQYVLDQILSGEATE 1084


>gi|418039657|ref|ZP_12677914.1| DNA-directed DNA polymerase [Escherichia coli W26]
 gi|383477372|gb|EID69294.1| DNA-directed DNA polymerase [Escherichia coli W26]
          Length = 752

 Score = 51.2 bits (121), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 56/233 (24%), Positives = 88/233 (37%), Gaps = 41/233 (17%)

Query: 741 LNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHKCILNSFYGYVMRKGARWYSME 800
           +  +W G+  EAK  GN                L  A K I+N+FYG +     R++   
Sbjct: 439 VTNIWHGR-DEAKRQGNK--------------PLSQALKIIMNAFYGVLGTTACRFFDPR 483

Query: 801 MAGVVTYTGAKIIQNARLLIEKIG-KPLELDTDGIWCVLPGSFPENFTFKTKDLKKKLTI 859
           +A  +T  G +I++  + LIE  G   +  DTD  +  L G+  E    K   +  +   
Sbjct: 484 LASSITMRGHQIMRQTKALIEAQGYDVIYGDTDSTFVWLKGAHSEEEAAKIGRVLVQHVN 543

Query: 860 SYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEFEVDGPYKAMILPASKEEGI 919
           ++    L           Q Q L   +   YETH            +   ++P  +    
Sbjct: 544 AWWAETL-----------QKQRLTSALELEYETH------------FCRFLMPTIRGADT 580

Query: 920 LIKKRYAVFNDDGTLAEL--KGFEIKRRGELKLIKVFQAELFDKFLHGSTIEE 970
             KKRYA    +G    +  KG E  R     L + FQ EL+ +       +E
Sbjct: 581 GSKKRYAGLIQEGDKQRMVFKGLETVRTDWTPLAQQFQQELYLRIFRNEPYQE 633



 Score = 41.2 bits (95), Expect = 6.1,   Method: Compositional matrix adjust.
 Identities = 55/241 (22%), Positives = 99/241 (41%), Gaps = 27/241 (11%)

Query: 311 IELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDKNQGECRA 370
           +E L  WFA+     P + + +N   FD   L+  A    +++   LG   D ++ E R 
Sbjct: 174 LEKLNAWFANHD---PDVIIGWNVVQFDLRMLQKHAER--YRLPLRLG--RDNSELEWRE 226

Query: 371 KFACHLDCFAWVK-----------RDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMV--- 416
               +   FA  K           + ++    S  L+ V +  LG      NP D +   
Sbjct: 227 HGFKNGVFFAQAKGRLIIDGIEALKSAFWNFSSFSLETVAQELLGEGKSIDNPWDRMDEI 286

Query: 417 --RFAKEKPQMMASYSVSDA-VATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCE 473
             RFA++KP  +A+Y++ D  + T   + T + PF+   AT+  +  D     GS     
Sbjct: 287 DRRFAEDKP-ALATYNLKDCELVTQIFHKTEIMPFLLERATVNGLPVDR--HGGSVAAFG 343

Query: 474 MLLMVQAYKANVICPNKHQSDPEKFYRNHLLESETYIGGHVECLESGVFRSDLPTSFKLD 533
            L   + ++A  + PN  +  P      ++++S   +   V  L+       +  +F +D
Sbjct: 344 HLYFPRMHRAGYVAPNLGEVPPHASPGGYVMDSRPGLYDSVLVLDYKSLYPSIIRTFLID 403

Query: 534 P 534
           P
Sbjct: 404 P 404


>gi|424554257|ref|ZP_17996025.1| DNA polymerase [Escherichia coli EC4436]
 gi|424560604|ref|ZP_18001930.1| DNA polymerase [Escherichia coli EC4437]
 gi|390896373|gb|EIP55763.1| DNA polymerase [Escherichia coli EC4436]
 gi|390912462|gb|EIP71114.1| DNA polymerase [Escherichia coli EC4437]
          Length = 783

 Score = 51.2 bits (121), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 57/235 (24%), Positives = 90/235 (38%), Gaps = 41/235 (17%)

Query: 741 LNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHKCILNSFYGYVMRKGARWYSME 800
           +  +W G+  EAK  GN                L  A K I+N+FYG +     R++   
Sbjct: 470 VTNIWHGR-DEAKRQGNK--------------PLSQALKIIMNAFYGVLGTTACRFFDPR 514

Query: 801 MAGVVTYTGAKIIQNARLLIEKIG-KPLELDTDGIWCVLPGSFPENFTFKTKDLKKKLTI 859
           +   +T  G +I++  + LIE  G   +  DTD  +  L G+  E    K          
Sbjct: 515 LVSSITMRGHQIMRQTKALIEAQGYDVIYGDTDSTFVWLKGAHSEEEATKIGR------- 567

Query: 860 SYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEFEVDGPYKAMILPASKEEGI 919
               ++ +V+V    T  Q Q L   +   YETH            +   ++P  +    
Sbjct: 568 ---ALVQHVNVWWAETL-QKQQLTSALELEYETH------------FCRFLMPTIRGADT 611

Query: 920 LIKKRYAVFNDDGTLAEL--KGFEIKRRGELKLIKVFQAELFDKFLHGSTIEECY 972
             KKRYA    +G    +  KG E  R     L + FQ EL+ +       +E +
Sbjct: 612 GSKKRYAGLIQEGDKQRMVFKGLETVRTDWTPLAQQFQQELYLRIFRNEPYQEYF 666



 Score = 41.2 bits (95), Expect = 5.7,   Method: Compositional matrix adjust.
 Identities = 55/241 (22%), Positives = 99/241 (41%), Gaps = 27/241 (11%)

Query: 311 IELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDKNQGECRA 370
           +E L  WFA+     P + + +N   FD   L+  A    +++   LG   D ++ E R 
Sbjct: 205 LEKLNAWFANYD---PDVIIGWNVVQFDLRMLQKHAER--YRIPLRLGH--DNSELEWRE 257

Query: 371 KFACHLDCFAWVK-----------RDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMV--- 416
               +   FA  K           + ++    S  L+ V +  LG      NP D +   
Sbjct: 258 HGFKNGVFFAQAKGRLIIDGIEALKSAFWNFSSFSLETVAQELLGEGKSIDNPWDRMDEI 317

Query: 417 --RFAKEKPQMMASYSVSDA-VATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCE 473
             RFA++KP  +A+Y++ D  + T   + T + PF+   AT+  +  D     GS     
Sbjct: 318 DRRFAEDKP-ALATYNLKDCELVTQIFHKTEIMPFLLERATVNGLPVDR--HGGSVAAFG 374

Query: 474 MLLMVQAYKANVICPNKHQSDPEKFYRNHLLESETYIGGHVECLESGVFRSDLPTSFKLD 533
            L   + ++A  + PN  +  P      ++++S   +   V  L+       +  +F +D
Sbjct: 375 HLYFPRMHRAGYVAPNLGEVPPHASPGGYVMDSRPGLYDSVLVLDYKSLYPSIIRTFLID 434

Query: 534 P 534
           P
Sbjct: 435 P 435


>gi|432916971|ref|ZP_20121710.1| DNA polymerase II [Escherichia coli KTE173]
 gi|432924201|ref|ZP_20126620.1| DNA polymerase II [Escherichia coli KTE175]
 gi|431448926|gb|ELH29638.1| DNA polymerase II [Escherichia coli KTE173]
 gi|431450690|gb|ELH31175.1| DNA polymerase II [Escherichia coli KTE175]
          Length = 783

 Score = 50.8 bits (120), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 57/233 (24%), Positives = 90/233 (38%), Gaps = 41/233 (17%)

Query: 741 LNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHKCILNSFYGYVMRKGARWYSME 800
           +  +W G+  EAK  GN                L  A K I+N+FYG +     R++   
Sbjct: 470 VTNIWHGR-DEAKRQGNK--------------PLSQALKIIMNAFYGVLGTTACRFFDPR 514

Query: 801 MAGVVTYTGAKIIQNARLLIEKIG-KPLELDTDGIWCVLPGSFPENFTFKTKDLKKKLTI 859
           +A  +T  G +I++  + LIE  G   +  DTD  +  L G+  E    K          
Sbjct: 515 LASSITMRGHQIMRQTKTLIEAQGYDVIYGDTDSTFVWLKGAHSEEEAAKIGR------- 567

Query: 860 SYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEFEVDGPYKAMILPASKEEGI 919
               ++ +V+    +T  Q Q L   +   YETH            +   ++P  +    
Sbjct: 568 ---ALVQHVNAWWADTL-QKQRLTSALELEYETH------------FCRFLMPTIRGADT 611

Query: 920 LIKKRYAVFNDDGTLAEL--KGFEIKRRGELKLIKVFQAELFDKFLHGSTIEE 970
             KKRYA    +G    +  KG E  R     L + FQ EL+ +       +E
Sbjct: 612 GSKKRYAGLIQEGDKQRMVFKGLETVRTDWTPLAQQFQQELYLRIFRNEPYQE 664



 Score = 42.4 bits (98), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 56/241 (23%), Positives = 100/241 (41%), Gaps = 27/241 (11%)

Query: 311 IELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDKNQGECRA 370
           +E L +WFA      P + + +N   FD   L+  A    +++   LG   D ++ E R 
Sbjct: 205 LEKLNVWFATHD---PDVIIGWNVVQFDLRMLQKHAER--YRIPLRLG--RDNSELEWRE 257

Query: 371 KFACHLDCFAWVK-----------RDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMV--- 416
               +   FA VK           + ++    S  L+ V +  LG      NP D +   
Sbjct: 258 HGFKNGVFFAQVKGRLIIDGIEALKSAFWNFSSFSLETVAQELLGEGKSIDNPWDRMDEI 317

Query: 417 --RFAKEKPQMMASYSVSDA-VATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCE 473
             RFA++KP  +A+Y++ D  + T   + T + PF+   AT+  +  D     GS     
Sbjct: 318 DRRFAEDKP-ALATYNLKDCELVTQIFHKTEIMPFLLERATVNGLPVDR--HGGSVAAFG 374

Query: 474 MLLMVQAYKANVICPNKHQSDPEKFYRNHLLESETYIGGHVECLESGVFRSDLPTSFKLD 533
            L   + ++A  + PN  +  P      ++++S   +   V  L+       +  +F +D
Sbjct: 375 HLYFPRMHRAGYVAPNLGEVPPHASPGGYVMDSRPGLYDSVLVLDYKSLYPSIIRTFLID 434

Query: 534 P 534
           P
Sbjct: 435 P 435


>gi|331645168|ref|ZP_08346279.1| DNA polymerase II (Pol II) [Escherichia coli M605]
 gi|387828118|ref|YP_003348055.1| DNA polymerase II [Escherichia coli SE15]
 gi|417660690|ref|ZP_12310271.1| DNA polymerase 2 [Escherichia coli AA86]
 gi|432498352|ref|ZP_19740133.1| DNA polymerase II [Escherichia coli KTE216]
 gi|432692736|ref|ZP_19927958.1| DNA polymerase II [Escherichia coli KTE162]
 gi|432979437|ref|ZP_20168227.1| DNA polymerase II [Escherichia coli KTE211]
 gi|433094932|ref|ZP_20281159.1| DNA polymerase II [Escherichia coli KTE139]
 gi|433104235|ref|ZP_20290261.1| DNA polymerase II [Escherichia coli KTE148]
 gi|281177275|dbj|BAI53605.1| DNA polymerase II [Escherichia coli SE15]
 gi|330909908|gb|EGH38418.1| DNA polymerase 2 [Escherichia coli AA86]
 gi|331045925|gb|EGI18044.1| DNA polymerase II (Pol II) [Escherichia coli M605]
 gi|431032797|gb|ELD45503.1| DNA polymerase II [Escherichia coli KTE216]
 gi|431238191|gb|ELF33130.1| DNA polymerase II [Escherichia coli KTE162]
 gi|431498975|gb|ELH78157.1| DNA polymerase II [Escherichia coli KTE211]
 gi|431620990|gb|ELI89812.1| DNA polymerase II [Escherichia coli KTE139]
 gi|431634953|gb|ELJ03169.1| DNA polymerase II [Escherichia coli KTE148]
          Length = 783

 Score = 50.8 bits (120), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 57/233 (24%), Positives = 90/233 (38%), Gaps = 41/233 (17%)

Query: 741 LNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHKCILNSFYGYVMRKGARWYSME 800
           +  +W G+  EAK  GN                L  A K I+N+FYG +     R++   
Sbjct: 470 VTNIWHGR-DEAKRQGNK--------------PLSQALKIIMNAFYGVLGTTACRFFDPR 514

Query: 801 MAGVVTYTGAKIIQNARLLIEKIG-KPLELDTDGIWCVLPGSFPENFTFKTKDLKKKLTI 859
           +A  +T  G +I++  + LIE  G   +  DTD  +  L G+  E    K          
Sbjct: 515 LASSITMRGHQIMRQTKTLIEAQGYDVIYGDTDSTFVWLKGAHSEEEAAKIGR------- 567

Query: 860 SYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEFEVDGPYKAMILPASKEEGI 919
               ++ +V+    +T  Q Q L   +   YETH            +   ++P  +    
Sbjct: 568 ---ALVQHVNAWWADTL-QKQRLTSALELEYETH------------FCRFLMPTIRGADT 611

Query: 920 LIKKRYAVFNDDGTLAEL--KGFEIKRRGELKLIKVFQAELFDKFLHGSTIEE 970
             KKRYA    +G    +  KG E  R     L + FQ EL+ +       +E
Sbjct: 612 GSKKRYAGLIQEGDKQRMVFKGLETVRTDWTPLAQQFQQELYLRIFRNEPYQE 664



 Score = 42.4 bits (98), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 56/241 (23%), Positives = 100/241 (41%), Gaps = 27/241 (11%)

Query: 311 IELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDKNQGECRA 370
           +E L +WFA      P + + +N   FD   L+  A    +++   LG   D ++ E R 
Sbjct: 205 LEKLNVWFATHD---PDVIIGWNVVQFDLRMLQKHAER--YRIPLRLG--RDNSELEWRE 257

Query: 371 KFACHLDCFAWVK-----------RDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMV--- 416
               +   FA VK           + ++    S  L+ V +  LG      NP D +   
Sbjct: 258 HGFKNGVFFAQVKGRLIIDGIEALKSAFWNFSSFSLETVAQELLGEGKSIDNPWDRMDEI 317

Query: 417 --RFAKEKPQMMASYSVSDA-VATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCE 473
             RFA++KP  +A+Y++ D  + T   + T + PF+   AT+  +  D     GS     
Sbjct: 318 DRRFAEDKP-ALATYNLKDCELVTQIFHKTEIMPFLLERATVNGLPVDR--HGGSVAAFG 374

Query: 474 MLLMVQAYKANVICPNKHQSDPEKFYRNHLLESETYIGGHVECLESGVFRSDLPTSFKLD 533
            L   + ++A  + PN  +  P      ++++S   +   V  L+       +  +F +D
Sbjct: 375 HLYFPRMHRAGYVAPNLGEVPPHASPGGYVMDSRPGLYDSVLVLDYKSLYPSIIRTFLID 434

Query: 534 P 534
           P
Sbjct: 435 P 435


>gi|420301351|ref|ZP_14803386.1| DNA polymerase [Escherichia coli TW10119]
 gi|444972704|ref|ZP_21290009.1| DNA polymerase II [Escherichia coli 99.1805]
 gi|390819944|gb|EIO86250.1| DNA polymerase [Escherichia coli TW10119]
 gi|444610149|gb|ELV84579.1| DNA polymerase II [Escherichia coli 99.1805]
          Length = 783

 Score = 50.8 bits (120), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 57/235 (24%), Positives = 90/235 (38%), Gaps = 41/235 (17%)

Query: 741 LNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHKCILNSFYGYVMRKGARWYSME 800
           +  +W G+  EAK  GN                L  A K I+N+FYG +     R++   
Sbjct: 470 VTNIWHGR-DEAKRQGNK--------------PLSQALKIIMNAFYGVLGTTACRFFDPR 514

Query: 801 MAGVVTYTGAKIIQNARLLIEKIG-KPLELDTDGIWCVLPGSFPENFTFKTKDLKKKLTI 859
           +   +T  G +I++  + LIE  G   +  DTD  +  L G+  E    K          
Sbjct: 515 LVSSITMRGHQIMRQTKALIEAQGYDVIYGDTDSTFVWLKGAHSEEEATKIGR------- 567

Query: 860 SYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEFEVDGPYKAMILPASKEEGI 919
               ++ +V+V    T  Q Q L   +   YETH            +   ++P  +    
Sbjct: 568 ---ALVQHVNVWWAETL-QKQQLTSALELEYETH------------FCRFLMPTIRGADT 611

Query: 920 LIKKRYAVFNDDGTLAEL--KGFEIKRRGELKLIKVFQAELFDKFLHGSTIEECY 972
             KKRYA    +G    +  KG E  R     L + FQ EL+ +       +E +
Sbjct: 612 GSKKRYAGLIQEGDKQRMVFKGLETVRTDWTPLAQQFQQELYLRIFRNEPYQEYF 666



 Score = 41.2 bits (95), Expect = 7.2,   Method: Compositional matrix adjust.
 Identities = 55/241 (22%), Positives = 99/241 (41%), Gaps = 27/241 (11%)

Query: 311 IELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDKNQGECRA 370
           +E L  WFA+     P + + +N   FD   L+  A    +++   LG   D ++ E R 
Sbjct: 205 LEKLNAWFANYD---PDVIIGWNVVQFDLRMLQKHAER--YRIPLRLG--RDNSELEWRE 257

Query: 371 KFACHLDCFAWVK-----------RDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMV--- 416
               +   FA  K           + ++    S  L+ V +  LG      NP D +   
Sbjct: 258 HGFKNGVFFAQAKGRLIIDGIEALKSAFWNFSSFSLETVAQELLGEGKSIDNPWDRMDEI 317

Query: 417 --RFAKEKPQMMASYSVSDA-VATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCE 473
             RFA++KP  +A+Y++ D  + T   + T + PF+   AT+  +  D     GS     
Sbjct: 318 DRRFAEDKP-ALATYNLKDCELVTQLFHKTEIMPFLLERATVNGLPVDR--HGGSVAAFG 374

Query: 474 MLLMVQAYKANVICPNKHQSDPEKFYRNHLLESETYIGGHVECLESGVFRSDLPTSFKLD 533
            L   + ++A  + PN  +  P      ++++S   +   V  L+       +  +F +D
Sbjct: 375 HLYFPRMHRAGYVAPNLGEVPPHASPGGYVMDSRPGLYDSVLVLDYKSLYPSIIRTFLID 434

Query: 534 P 534
           P
Sbjct: 435 P 435


>gi|421844687|ref|ZP_16277844.1| DNA polymerase II [Citrobacter freundii ATCC 8090 = MTCC 1658]
 gi|411774166|gb|EKS57676.1| DNA polymerase II [Citrobacter freundii ATCC 8090 = MTCC 1658]
          Length = 783

 Score = 50.8 bits (120), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 60/234 (25%), Positives = 94/234 (40%), Gaps = 43/234 (18%)

Query: 741 LNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHKCILNSFYGYVMRKGARWYSME 800
           + ++W G+  EAK  GN                L  A K I+N+FYG +     R++   
Sbjct: 470 VTRIWHGR-DEAKRRGNK--------------PLSQALKIIMNAFYGVLGTTACRFFDPR 514

Query: 801 MAGVVTYTGAKIIQNARLLIEKIG-KPLELDTDGIWCVLPGSFPENFTFKTKDLKKKLTI 859
           +A  +T  G  I++  + LIE  G   +  DTD  +  L  +  E+       + ++L +
Sbjct: 515 LASSITMRGHAIMRQTKALIEAQGYDVIYGDTDSTFVWLKKAHSED---DAARIGREL-V 570

Query: 860 SYPCVMLNVDVARNNTNDQY-QTLVDPVSKTYETHSECSIEFEVDGPYKAMILPASKEEG 918
           SY              ND + Q+L     K     S   +EFE    +   ++P  +   
Sbjct: 571 SY-------------VNDWWAQSL-----KQQNLTSALELEFETH--FCRFLMPTIRGAD 610

Query: 919 ILIKKRYAVFNDDGTLAEL--KGFEIKRRGELKLIKVFQAELFDKFLHGSTIEE 970
              KKRYA    DGT   +  KG E  R     L + FQ EL+ +       +E
Sbjct: 611 TGSKKRYAGMIQDGTEQRMVFKGLETVRTDWTPLAQQFQQELYLRIFRNEPYQE 664


>gi|425252200|ref|ZP_18645119.1| DNA polymerase [Escherichia coli CB7326]
 gi|408187919|gb|EKI13808.1| DNA polymerase [Escherichia coli CB7326]
          Length = 783

 Score = 50.8 bits (120), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 57/235 (24%), Positives = 90/235 (38%), Gaps = 41/235 (17%)

Query: 741 LNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHKCILNSFYGYVMRKGARWYSME 800
           +  +W G+  EAK  GN                L  A K I+N+FYG +     R++   
Sbjct: 470 VTNIWHGR-DEAKRQGNK--------------PLSQALKIIMNAFYGVLGTTACRFFDPR 514

Query: 801 MAGVVTYTGAKIIQNARLLIEKIG-KPLELDTDGIWCVLPGSFPENFTFKTKDLKKKLTI 859
           +   +T  G +I++  + LIE  G   +  DTD  +  L G+  E    K          
Sbjct: 515 LVSSITMRGHQIMRQTKALIEAQGYDVIYGDTDSTFVWLKGAHSEEEATKIGR------- 567

Query: 860 SYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEFEVDGPYKAMILPASKEEGI 919
               ++ +V+V    T  Q Q L   +   YETH            +   ++P  +    
Sbjct: 568 ---ALVQHVNVWWAETL-QKQQLTSALELEYETH------------FCRFLMPTIRGADT 611

Query: 920 LIKKRYAVFNDDGTLAEL--KGFEIKRRGELKLIKVFQAELFDKFLHGSTIEECY 972
             KKRYA    +G    +  KG E  R     L + FQ EL+ +       +E +
Sbjct: 612 GSKKRYAGLIQEGDKQRMVFKGLETVRTDWTPLAQQFQQELYLRIFRNEPYQEYF 666



 Score = 40.8 bits (94), Expect = 7.2,   Method: Compositional matrix adjust.
 Identities = 55/241 (22%), Positives = 99/241 (41%), Gaps = 27/241 (11%)

Query: 311 IELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDKNQGECRA 370
           +E L  WFA+     P + + +N   FD   L+  A    +++   LG   D ++ E R 
Sbjct: 205 LEKLNAWFANYD---PDVIIGWNVVQFDLRMLQKHAER--YRIPLRLG--RDNSELEWRE 257

Query: 371 KFACHLDCFAWVK-----------RDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMV--- 416
               +   FA  K           + ++    S  L+ V +  LG      NP D +   
Sbjct: 258 HGFKNGVFFAQAKGRLIIDGIEALKSAFWNFSSFSLETVAQELLGEGKSIDNPWDRMDEI 317

Query: 417 --RFAKEKPQMMASYSVSDA-VATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCE 473
             RFA++KP  +A+Y++ D  + T   + T + PF+   AT+  +  D     GS     
Sbjct: 318 DRRFAEDKP-ALATYNLKDCELVTQIFHKTEIMPFLLERATVNGLPVDR--HGGSVAAFG 374

Query: 474 MLLMVQAYKANVICPNKHQSDPEKFYRNHLLESETYIGGHVECLESGVFRSDLPTSFKLD 533
            L   + ++A  + PN  +  P      ++++S   +   V  L+       +  +F +D
Sbjct: 375 HLYFPRMHRAGYVAPNLGEVPPHASPGGYVMDSRPGLYDSVLVLDYKSLYPSIIRTFLID 434

Query: 534 P 534
           P
Sbjct: 435 P 435


>gi|416895408|ref|ZP_11925309.1| DNA polymerase II [Escherichia coli STEC_7v]
 gi|417112104|ref|ZP_11964227.1| DNA polymerase II [Escherichia coli 1.2741]
 gi|422802622|ref|ZP_16851115.1| DNA polymerase B protein [Escherichia coli M863]
 gi|323964841|gb|EGB60308.1| DNA polymerase B protein [Escherichia coli M863]
 gi|327255039|gb|EGE66642.1| DNA polymerase II [Escherichia coli STEC_7v]
 gi|386142888|gb|EIG84024.1| DNA polymerase II [Escherichia coli 1.2741]
          Length = 783

 Score = 50.8 bits (120), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 57/233 (24%), Positives = 89/233 (38%), Gaps = 41/233 (17%)

Query: 741 LNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHKCILNSFYGYVMRKGARWYSME 800
           +  +W G+  EAK  GN                L  A K I+N+FYG +     R++   
Sbjct: 470 VTNIWHGR-DEAKRQGNK--------------PLSQALKIIMNAFYGVLGTTACRFFDPR 514

Query: 801 MAGVVTYTGAKIIQNARLLIEKIG-KPLELDTDGIWCVLPGSFPENFTFKTKDLKKKLTI 859
           +A  +T  G +I++  + LIE  G   +  DTD  +  L G+  E    K          
Sbjct: 515 LASSITMRGHQIMRQTKALIEAQGYDVIYGDTDSTFVWLKGAHSEEEAAKIGR------- 567

Query: 860 SYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEFEVDGPYKAMILPASKEEGI 919
               ++ +V+     T  Q Q L   +   YETH            +   ++P  +    
Sbjct: 568 ---ALVQHVNAWWAETLQQ-QRLTSALELEYETH------------FCRFLMPTIRGADT 611

Query: 920 LIKKRYAVFNDDGTLAEL--KGFEIKRRGELKLIKVFQAELFDKFLHGSTIEE 970
             KKRYA    +G    +  KG E  R     L + FQ EL+ +       +E
Sbjct: 612 GSKKRYAGLIQEGDKQRIVFKGLETVRTDWTPLAQQFQQELYLRIFRNEPYQE 664


>gi|420345134|ref|ZP_14846569.1| DNA polymerase II [Shigella boydii 965-58]
 gi|391276917|gb|EIQ35678.1| DNA polymerase II [Shigella boydii 965-58]
          Length = 783

 Score = 50.8 bits (120), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 57/233 (24%), Positives = 87/233 (37%), Gaps = 41/233 (17%)

Query: 741 LNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHKCILNSFYGYVMRKGARWYSME 800
           +  +W G+  EAK  GN                L  A K I+N+FYG +     R++   
Sbjct: 470 VTNIWHGR-DEAKRQGNK--------------PLSQALKIIMNAFYGVLGTTACRFFDPR 514

Query: 801 MAGVVTYTGAKIIQNARLLIEKIG-KPLELDTDGIWCVLPGSFPENFTFKTKDLKKKLTI 859
           +A  +T  G +I++  + LIE  G   +  DTD  +  L G+  E    K      +   
Sbjct: 515 LASSITMRGHQIMRQTKALIEAQGYDVIYGDTDSTFVWLKGAHSEEEAAKIGRALVQHVN 574

Query: 860 SYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEFEVDGPYKAMILPASKEEGI 919
           S+    L           Q Q L   +   YETH            +   ++P  +    
Sbjct: 575 SWWAETL-----------QKQRLTSALELEYETH------------FCRFLMPTIRGADT 611

Query: 920 LIKKRYAVFNDDGTLAEL--KGFEIKRRGELKLIKVFQAELFDKFLHGSTIEE 970
             KKRYA    +G    +  KG E  R     L + FQ EL+ +       +E
Sbjct: 612 GSKKRYAGLIQEGDKQRMVFKGLETVRTDWTPLAQQFQQELYLRIFRNEPYQE 664



 Score = 40.8 bits (94), Expect = 7.6,   Method: Compositional matrix adjust.
 Identities = 55/241 (22%), Positives = 99/241 (41%), Gaps = 27/241 (11%)

Query: 311 IELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDKNQGECRA 370
           +E L  WFA+     P + + +N   FD   L+  A    +++   LG   D ++ E R 
Sbjct: 205 LEKLNAWFANHD---PDVIIGWNVVQFDLRMLQKHAER--YRLPLRLG--RDNSELEWRE 257

Query: 371 KFACHLDCFAWVK-----------RDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMV--- 416
               +   FA  K           + ++    S  L+ V +  LG      NP D +   
Sbjct: 258 HGFKNGVFFAQAKGRLIIDGIEALKSAFWNFSSFSLETVAQELLGEGKSIDNPWDRMDEI 317

Query: 417 --RFAKEKPQMMASYSVSDA-VATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCE 473
             RFA++KP  +A+Y++ D  + T   + T + PF+   AT+  +  D     GS     
Sbjct: 318 DRRFAEDKP-ALATYNLKDCELVTQIFHKTEIMPFLLERATVNGLPVDR--HGGSVAAFG 374

Query: 474 MLLMVQAYKANVICPNKHQSDPEKFYRNHLLESETYIGGHVECLESGVFRSDLPTSFKLD 533
            L   + ++A  + PN  +  P      ++++S   +   V  L+       +  +F +D
Sbjct: 375 HLYFPRMHRAGYVAPNLGEVPPHASPGGYVMDSRPGLYDSVLVLDYKSLYPSIIRTFLID 434

Query: 534 P 534
           P
Sbjct: 435 P 435


>gi|387605542|ref|YP_006094398.1| DNA polymerase II [Escherichia coli 042]
 gi|432452817|ref|ZP_19695064.1| DNA polymerase II [Escherichia coli KTE193]
 gi|433031468|ref|ZP_20219294.1| DNA polymerase II [Escherichia coli KTE112]
 gi|284919842|emb|CBG32897.1| DNA polymerase II [Escherichia coli 042]
 gi|430975411|gb|ELC92306.1| DNA polymerase II [Escherichia coli KTE193]
 gi|431561652|gb|ELI35017.1| DNA polymerase II [Escherichia coli KTE112]
          Length = 783

 Score = 50.8 bits (120), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 56/233 (24%), Positives = 88/233 (37%), Gaps = 41/233 (17%)

Query: 741 LNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHKCILNSFYGYVMRKGARWYSME 800
           +  +W G+  EAK  GN                L  A K I+N+FYG +     R++   
Sbjct: 470 VTNIWHGR-DEAKRQGNK--------------PLSQALKIIMNAFYGVLGTTACRFFDPR 514

Query: 801 MAGVVTYTGAKIIQNARLLIEKIG-KPLELDTDGIWCVLPGSFPENFTFKTKDLKKKLTI 859
           +A  +T  G +I++  + LIE  G   +  DTD  +  L G+  E    K   +  +   
Sbjct: 515 LASSITMRGHQIMRQTKALIEAQGYDVIYGDTDSTFVWLKGAHSEEEAAKIGRVLVQHVN 574

Query: 860 SYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEFEVDGPYKAMILPASKEEGI 919
           ++    L           Q Q L   +   YETH            +   ++P  +    
Sbjct: 575 AWWAETL-----------QKQQLTSALELEYETH------------FCRFLMPTIRGADT 611

Query: 920 LIKKRYAVFNDDGTLAEL--KGFEIKRRGELKLIKVFQAELFDKFLHGSTIEE 970
             KKRYA    +G    +  KG E  R     L + FQ EL+ +       +E
Sbjct: 612 GSKKRYAGLIQEGDKQRMVFKGLETVRTDWTPLAQQFQQELYLRIFRNEPYQE 664



 Score = 40.8 bits (94), Expect = 8.0,   Method: Compositional matrix adjust.
 Identities = 55/241 (22%), Positives = 99/241 (41%), Gaps = 27/241 (11%)

Query: 311 IELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDKNQGECRA 370
           +E L  WFA+     P + + +N   FD   L+  A    +++   LG   D ++ E R 
Sbjct: 205 LEKLNAWFANYD---PDVIIGWNVVQFDLRMLQKHAER--YRIPLRLG--RDNSELEWRE 257

Query: 371 KFACHLDCFAWVK-----------RDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMV--- 416
               +   FA  K           + ++    S  L+ V +  LG      NP D +   
Sbjct: 258 HGFKNGVFFAQAKGRLIIDGIEALKSAFWNFSSFSLETVAQELLGEGKSIDNPWDRMDEI 317

Query: 417 --RFAKEKPQMMASYSVSDA-VATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCE 473
             RFA++KP  +A+Y++ D  + T   + T + PF+   AT+  +  D     GS     
Sbjct: 318 DRRFAEDKP-ALATYNLKDCELVTQIFHKTEIMPFLLERATVNGLPVDR--HGGSVAAFG 374

Query: 474 MLLMVQAYKANVICPNKHQSDPEKFYRNHLLESETYIGGHVECLESGVFRSDLPTSFKLD 533
            L   + ++A  + PN  +  P      ++++S   +   V  L+       +  +F +D
Sbjct: 375 HLYFPRMHRAGYVAPNLGEVPPHASPGGYVMDSRPGLYDSVLVLDYKSLYPSIIRTFLID 434

Query: 534 P 534
           P
Sbjct: 435 P 435


>gi|432944627|ref|ZP_20141037.1| DNA polymerase II [Escherichia coli KTE196]
 gi|433041557|ref|ZP_20229096.1| DNA polymerase II [Escherichia coli KTE117]
 gi|431464558|gb|ELH44677.1| DNA polymerase II [Escherichia coli KTE196]
 gi|431561202|gb|ELI34586.1| DNA polymerase II [Escherichia coli KTE117]
          Length = 783

 Score = 50.8 bits (120), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 57/233 (24%), Positives = 89/233 (38%), Gaps = 41/233 (17%)

Query: 741 LNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHKCILNSFYGYVMRKGARWYSME 800
           +  +W G+  EAK  GN                L  A K I+N+FYG +     R++   
Sbjct: 470 VTNIWHGR-DEAKRQGNK--------------PLSQALKIIMNAFYGVLGTTACRFFDPR 514

Query: 801 MAGVVTYTGAKIIQNARLLIEKIG-KPLELDTDGIWCVLPGSFPENFTFKTKDLKKKLTI 859
           +A  +T  G +I++  + LIE  G   +  DTD  +  L G+  E    K          
Sbjct: 515 LASSITMRGHQIMRQTKALIEAQGYDVIYGDTDSTFVWLKGAHSEEEAVKIGR------- 567

Query: 860 SYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEFEVDGPYKAMILPASKEEGI 919
               ++ +V+     T  Q Q L   +   YETH            +   ++P  +    
Sbjct: 568 ---ALVQHVNAWWAETL-QKQQLTSALELEYETH------------FCRFLMPTIRGADT 611

Query: 920 LIKKRYAVFNDDGTLAEL--KGFEIKRRGELKLIKVFQAELFDKFLHGSTIEE 970
             KKRYA    +G    +  KG E  R     L + FQ EL+ +       +E
Sbjct: 612 GSKKRYAGLIQEGDKQRMVFKGLETVRTDWTPLAQQFQQELYLRIFRNEPYQE 664



 Score = 40.8 bits (94), Expect = 7.3,   Method: Compositional matrix adjust.
 Identities = 55/241 (22%), Positives = 99/241 (41%), Gaps = 27/241 (11%)

Query: 311 IELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDKNQGECRA 370
           +E L  WFA+     P + + +N   FD   L+  A    +++   LG   D ++ E R 
Sbjct: 205 LEKLNAWFANHD---PDVIIGWNVVQFDLRMLQKHAER--YRLPLRLG--RDNSELEWRE 257

Query: 371 KFACHLDCFAWVK-----------RDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMV--- 416
               +   FA  K           + ++    S  L+ V +  LG      NP D +   
Sbjct: 258 HGFKNGVFFAQAKGRLIIDGIEALKSAFWNFSSFSLETVAQELLGEGKSIDNPWDRMDEI 317

Query: 417 --RFAKEKPQMMASYSVSDA-VATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCE 473
             RFA++KP  +A+Y++ D  + T   + T + PF+   AT+  +  D     GS     
Sbjct: 318 DRRFAEDKP-ALATYNLKDCELVTQIFHKTEIMPFLLERATVNGLPVDR--HGGSVAAFG 374

Query: 474 MLLMVQAYKANVICPNKHQSDPEKFYRNHLLESETYIGGHVECLESGVFRSDLPTSFKLD 533
            L   + ++A  + PN  +  P      ++++S   +   V  L+       +  +F +D
Sbjct: 375 HLYFPRMHRAGYVAPNLGEVPPHASPGGYVMDSRPGLYDSVLVLDYKSLYPSIIRTFLID 434

Query: 534 P 534
           P
Sbjct: 435 P 435


>gi|255077772|ref|XP_002502470.1| predicted protein [Micromonas sp. RCC299]
 gi|226517735|gb|ACO63728.1| predicted protein [Micromonas sp. RCC299]
          Length = 1147

 Score = 50.8 bits (120), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 46/173 (26%), Positives = 73/173 (42%), Gaps = 28/173 (16%)

Query: 195 EYDVPYHIRFAIDNDVRCGQW-------YDVSISSTGPLLEKRVDL-------------- 233
           E +V Y +RF +D  V  G W       Y +  S    + +   D+              
Sbjct: 282 ESNVLYTLRFMVDRGVVGGNWVELPAGGYTIRESQKQSMCQYECDVKFDKVVSHPPEGQY 341

Query: 234 LQRAEVHVCAFDIETTKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYT 293
            + A   + + DIE       FPDAD+D ++ I+ M+  QG    +   + + I  L+ T
Sbjct: 342 SKLAPFRILSVDIECAGRKGHFPDADHDPVIQIATMVTCQG----DDRPIIKAIWTLD-T 396

Query: 294 PKPEFEGYFKVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRA 346
             P       V +  +E ELLR W   ++   P + + YN   FD+P+L  RA
Sbjct: 397 CAPIVGA--DVLSFKDERELLRSWGKFLRSTDPDLLIGYNIVNFDFPYLINRA 447


>gi|168801485|ref|ZP_02826492.1| DNA polymerase II [Escherichia coli O157:H7 str. EC508]
 gi|416325949|ref|ZP_11666273.1| DNA polymerase II [Escherichia coli O157:H7 str. 1125]
 gi|420313101|ref|ZP_14815016.1| DNA polymerase [Escherichia coli EC1734]
 gi|424125513|ref|ZP_17858755.1| DNA polymerase [Escherichia coli PA9]
 gi|424459406|ref|ZP_17910417.1| DNA polymerase [Escherichia coli PA39]
 gi|424478441|ref|ZP_17927730.1| DNA polymerase [Escherichia coli TW07945]
 gi|424484466|ref|ZP_17933385.1| DNA polymerase [Escherichia coli TW09098]
 gi|424510166|ref|ZP_17956472.1| DNA polymerase [Escherichia coli TW14313]
 gi|425129231|ref|ZP_18530374.1| DNA polymerase II [Escherichia coli 8.2524]
 gi|425153411|ref|ZP_18552998.1| DNA polymerase [Escherichia coli PA34]
 gi|425308814|ref|ZP_18698326.1| DNA polymerase [Escherichia coli EC1735]
 gi|425314742|ref|ZP_18703860.1| DNA polymerase [Escherichia coli EC1736]
 gi|425320817|ref|ZP_18709538.1| DNA polymerase [Escherichia coli EC1737]
 gi|429053403|ref|ZP_19117924.1| DNA polymerase II [Escherichia coli 97.1742]
 gi|444999606|ref|ZP_21316081.1| DNA polymerase II [Escherichia coli PA2]
 gi|445016011|ref|ZP_21332072.1| DNA polymerase II [Escherichia coli PA8]
 gi|445032200|ref|ZP_21347838.1| DNA polymerase II [Escherichia coli 99.1762]
 gi|189376366|gb|EDU94782.1| DNA polymerase II [Escherichia coli O157:H7 str. EC508]
 gi|209746838|gb|ACI71726.1| DNA polymerase II [Escherichia coli]
 gi|326345221|gb|EGD68964.1| DNA polymerase II [Escherichia coli O157:H7 str. 1125]
 gi|390693725|gb|EIN68342.1| DNA polymerase [Escherichia coli PA9]
 gi|390789323|gb|EIO56787.1| DNA polymerase [Escherichia coli PA39]
 gi|390812292|gb|EIO78975.1| DNA polymerase [Escherichia coli TW07945]
 gi|390825024|gb|EIO90973.1| DNA polymerase [Escherichia coli TW09098]
 gi|390862940|gb|EIP25105.1| DNA polymerase [Escherichia coli TW14313]
 gi|390912953|gb|EIP71599.1| DNA polymerase [Escherichia coli EC1734]
 gi|408087296|gb|EKH20745.1| DNA polymerase [Escherichia coli PA34]
 gi|408240804|gb|EKI63455.1| DNA polymerase [Escherichia coli EC1735]
 gi|408250414|gb|EKI72274.1| DNA polymerase [Escherichia coli EC1736]
 gi|408254735|gb|EKI76233.1| DNA polymerase [Escherichia coli EC1737]
 gi|408592057|gb|EKK66450.1| DNA polymerase II [Escherichia coli 8.2524]
 gi|427323161|gb|EKW84764.1| DNA polymerase II [Escherichia coli 97.1742]
 gi|444625107|gb|ELV98978.1| DNA polymerase II [Escherichia coli PA2]
 gi|444639279|gb|ELW12598.1| DNA polymerase II [Escherichia coli PA8]
 gi|444655262|gb|ELW27881.1| DNA polymerase II [Escherichia coli 99.1762]
          Length = 783

 Score = 50.8 bits (120), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 57/235 (24%), Positives = 90/235 (38%), Gaps = 41/235 (17%)

Query: 741 LNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHKCILNSFYGYVMRKGARWYSME 800
           +  +W G+  EAK  GN                L  A K I+N+FYG +     R++   
Sbjct: 470 VTNIWHGR-DEAKRQGNK--------------PLSQALKIIMNAFYGVLGTTACRFFDPR 514

Query: 801 MAGVVTYTGAKIIQNARLLIEKIG-KPLELDTDGIWCVLPGSFPENFTFKTKDLKKKLTI 859
           +   +T  G +I++  + LIE  G   +  DTD  +  L G+  E    K          
Sbjct: 515 LVSSITMRGHQIMRQTKALIEAQGYDVIYGDTDSTFVWLKGAHSEEEATKIGR------- 567

Query: 860 SYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEFEVDGPYKAMILPASKEEGI 919
               ++ +V+V    T  Q Q L   +   YETH            +   ++P  +    
Sbjct: 568 ---ALVQHVNVWWAETL-QKQQLTSALELEYETH------------FCRFLMPTIRGADT 611

Query: 920 LIKKRYAVFNDDGTLAEL--KGFEIKRRGELKLIKVFQAELFDKFLHGSTIEECY 972
             KKRYA    +G    +  KG E  R     L + FQ EL+ +       +E +
Sbjct: 612 GSKKRYAGLIQEGDKQRMVFKGLETVRTDWTPLAQQFQQELYLRIFRNEPYQEYF 666



 Score = 40.8 bits (94), Expect = 7.6,   Method: Compositional matrix adjust.
 Identities = 55/241 (22%), Positives = 99/241 (41%), Gaps = 27/241 (11%)

Query: 311 IELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDKNQGECRA 370
           +E L  WFA+     P + + +N   FD   L+  A    +++   LG   D ++ E R 
Sbjct: 205 LEKLNAWFANYD---PDVIIGWNVVQFDLRMLQKHAER--YRIPLRLG--RDNSELEWRE 257

Query: 371 KFACHLDCFAWVK-----------RDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMV--- 416
               +   FA  K           + ++    S  L+ V +  LG      NP D +   
Sbjct: 258 HGFKNGVFFAQAKGRLIIDGIEALKSAFWNFSSFSLETVAQELLGEGKSIDNPWDRMDEI 317

Query: 417 --RFAKEKPQMMASYSVSDA-VATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCE 473
             RFA++KP  +A+Y++ D  + T   + T + PF+   AT+  +  D     GS     
Sbjct: 318 DRRFAEDKP-ALATYNLKDCELVTQIFHKTEIMPFLLERATVNGLPVDR--HGGSVAAFG 374

Query: 474 MLLMVQAYKANVICPNKHQSDPEKFYRNHLLESETYIGGHVECLESGVFRSDLPTSFKLD 533
            L   + ++A  + PN  +  P      ++++S   +   V  L+       +  +F +D
Sbjct: 375 HLYFPRMHRAGYVAPNLGEVPPHASPGGYVMDSRPGLYDSVLVLDYKSLYPSIIRTFLID 434

Query: 534 P 534
           P
Sbjct: 435 P 435


>gi|15799744|ref|NP_285756.1| DNA polymerase II [Escherichia coli O157:H7 str. EDL933]
 gi|15829318|ref|NP_308091.1| DNA polymerase II [Escherichia coli O157:H7 str. Sakai]
 gi|168751431|ref|ZP_02776453.1| DNA polymerase II [Escherichia coli O157:H7 str. EC4113]
 gi|168755666|ref|ZP_02780673.1| DNA polymerase II [Escherichia coli O157:H7 str. EC4401]
 gi|168764063|ref|ZP_02789070.1| DNA polymerase II [Escherichia coli O157:H7 str. EC4501]
 gi|168771282|ref|ZP_02796289.1| DNA polymerase II [Escherichia coli O157:H7 str. EC4486]
 gi|168776902|ref|ZP_02801909.1| DNA polymerase II [Escherichia coli O157:H7 str. EC4196]
 gi|168781943|ref|ZP_02806950.1| DNA polymerase II [Escherichia coli O157:H7 str. EC4076]
 gi|168789585|ref|ZP_02814592.1| DNA polymerase II [Escherichia coli O157:H7 str. EC869]
 gi|195939276|ref|ZP_03084658.1| DNA polymerase II [Escherichia coli O157:H7 str. EC4024]
 gi|208808136|ref|ZP_03250473.1| DNA polymerase II [Escherichia coli O157:H7 str. EC4206]
 gi|208813114|ref|ZP_03254443.1| DNA polymerase II [Escherichia coli O157:H7 str. EC4045]
 gi|208818657|ref|ZP_03258977.1| DNA polymerase II [Escherichia coli O157:H7 str. EC4042]
 gi|209398156|ref|YP_002268668.1| DNA polymerase II [Escherichia coli O157:H7 str. EC4115]
 gi|217325683|ref|ZP_03441767.1| DNA polymerase II [Escherichia coli O157:H7 str. TW14588]
 gi|254791198|ref|YP_003076035.1| DNA polymerase II [Escherichia coli O157:H7 str. TW14359]
 gi|261226819|ref|ZP_05941100.1| DNA polymerase II [Escherichia coli O157:H7 str. FRIK2000]
 gi|261255222|ref|ZP_05947755.1| DNA polymerase II [Escherichia coli O157:H7 str. FRIK966]
 gi|387880621|ref|YP_006310923.1| DNA polymerase II [Escherichia coli Xuzhou21]
 gi|416309243|ref|ZP_11655696.1| DNA polymerase II [Escherichia coli O157:H7 str. 1044]
 gi|416319062|ref|ZP_11661614.1| DNA polymerase II [Escherichia coli O157:H7 str. EC1212]
 gi|416773277|ref|ZP_11873555.1| DNA polymerase II [Escherichia coli O157:H7 str. G5101]
 gi|419048586|ref|ZP_13595511.1| DNA polymerase II [Escherichia coli DEC3A]
 gi|419054344|ref|ZP_13601207.1| DNA polymerase II [Escherichia coli DEC3B]
 gi|419054706|ref|ZP_13601567.1| DNA polymerase II [Escherichia coli DEC3C]
 gi|419060265|ref|ZP_13607053.1| DNA polymerase II [Escherichia coli DEC3D]
 gi|419066093|ref|ZP_13612784.1| DNA polymerase II [Escherichia coli DEC3E]
 gi|419083813|ref|ZP_13629250.1| DNA polymerase II [Escherichia coli DEC4A]
 gi|419089821|ref|ZP_13635165.1| DNA polymerase II [Escherichia coli DEC4B]
 gi|419095434|ref|ZP_13640703.1| DNA polymerase II [Escherichia coli DEC4C]
 gi|419101092|ref|ZP_13646273.1| DNA polymerase II [Escherichia coli DEC4D]
 gi|419107104|ref|ZP_13652217.1| DNA polymerase II [Escherichia coli DEC4E]
 gi|419112547|ref|ZP_13657592.1| DNA polymerase II [Escherichia coli DEC4F]
 gi|420267101|ref|ZP_14769512.1| DNA polymerase [Escherichia coli PA22]
 gi|420273031|ref|ZP_14775366.1| DNA polymerase [Escherichia coli PA40]
 gi|420284332|ref|ZP_14786552.1| DNA polymerase [Escherichia coli TW10246]
 gi|420290080|ref|ZP_14792249.1| DNA polymerase [Escherichia coli TW11039]
 gi|420295802|ref|ZP_14797900.1| DNA polymerase [Escherichia coli TW09109]
 gi|420307572|ref|ZP_14809548.1| DNA polymerase [Escherichia coli EC1738]
 gi|421810204|ref|ZP_16246024.1| DNA polymerase [Escherichia coli 8.0416]
 gi|421816276|ref|ZP_16251849.1| DNA polymerase II [Escherichia coli 10.0821]
 gi|421821669|ref|ZP_16257114.1| DNA polymerase [Escherichia coli FRIK920]
 gi|421828422|ref|ZP_16263754.1| DNA polymerase [Escherichia coli PA7]
 gi|423652422|ref|ZP_17627826.1| DNA polymerase [Escherichia coli PA31]
 gi|424074821|ref|ZP_17812213.1| DNA polymerase [Escherichia coli FDA505]
 gi|424081069|ref|ZP_17817976.1| DNA polymerase [Escherichia coli FDA517]
 gi|424087746|ref|ZP_17824048.1| DNA polymerase [Escherichia coli FRIK1996]
 gi|424093954|ref|ZP_17829768.1| DNA polymerase [Escherichia coli FRIK1985]
 gi|424100368|ref|ZP_17835577.1| DNA polymerase [Escherichia coli FRIK1990]
 gi|424107192|ref|ZP_17841813.1| DNA polymerase [Escherichia coli 93-001]
 gi|424113167|ref|ZP_17847366.1| DNA polymerase [Escherichia coli PA3]
 gi|424119296|ref|ZP_17853055.1| DNA polymerase [Escherichia coli PA5]
 gi|424131519|ref|ZP_17864375.1| DNA polymerase [Escherichia coli PA10]
 gi|424138132|ref|ZP_17870474.1| DNA polymerase [Escherichia coli PA14]
 gi|424144586|ref|ZP_17876394.1| DNA polymerase [Escherichia coli PA15]
 gi|424150732|ref|ZP_17882038.1| DNA polymerase [Escherichia coli PA24]
 gi|424260084|ref|ZP_17893020.1| DNA polymerase [Escherichia coli PA25]
 gi|424260770|ref|ZP_17893356.1| DNA polymerase [Escherichia coli PA28]
 gi|424417006|ref|ZP_17899126.1| DNA polymerase [Escherichia coli PA32]
 gi|424453131|ref|ZP_17904718.1| DNA polymerase [Escherichia coli PA33]
 gi|424465870|ref|ZP_17916107.1| DNA polymerase [Escherichia coli PA41]
 gi|424472472|ref|ZP_17922184.1| DNA polymerase [Escherichia coli PA42]
 gi|424490556|ref|ZP_17939035.1| DNA polymerase [Escherichia coli TW09195]
 gi|424497680|ref|ZP_17945003.1| DNA polymerase [Escherichia coli EC4203]
 gi|424503926|ref|ZP_17950751.1| DNA polymerase [Escherichia coli EC4196]
 gi|424517748|ref|ZP_17962222.1| DNA polymerase [Escherichia coli TW14301]
 gi|424523578|ref|ZP_17967645.1| DNA polymerase [Escherichia coli EC4421]
 gi|424529783|ref|ZP_17973452.1| DNA polymerase [Escherichia coli EC4422]
 gi|424535754|ref|ZP_17979062.1| DNA polymerase [Escherichia coli EC4013]
 gi|424541641|ref|ZP_17984526.1| DNA polymerase [Escherichia coli EC4402]
 gi|424547967|ref|ZP_17990229.1| DNA polymerase [Escherichia coli EC4439]
 gi|424566612|ref|ZP_18007578.1| DNA polymerase [Escherichia coli EC4448]
 gi|424572811|ref|ZP_18013282.1| DNA polymerase [Escherichia coli EC1845]
 gi|424584640|ref|ZP_18024260.1| DNA polymerase [Escherichia coli EC1863]
 gi|425095452|ref|ZP_18498512.1| DNA polymerase II [Escherichia coli 3.4870]
 gi|425101537|ref|ZP_18504225.1| DNA polymerase II [Escherichia coli 5.2239]
 gi|425107394|ref|ZP_18509679.1| DNA polymerase [Escherichia coli 6.0172]
 gi|425123206|ref|ZP_18524821.1| DNA polymerase II [Escherichia coli 8.0586]
 gi|425135574|ref|ZP_18536343.1| DNA polymerase [Escherichia coli 10.0833]
 gi|425147363|ref|ZP_18547327.1| DNA polymerase II [Escherichia coli 10.0869]
 gi|425147798|ref|ZP_18547735.1| DNA polymerase II [Escherichia coli 88.0221]
 gi|425159874|ref|ZP_18559084.1| DNA polymerase [Escherichia coli FDA506]
 gi|425165388|ref|ZP_18564231.1| DNA polymerase [Escherichia coli FDA507]
 gi|425171674|ref|ZP_18570111.1| DNA polymerase [Escherichia coli FDA504]
 gi|425177476|ref|ZP_18575563.1| DNA polymerase [Escherichia coli FRIK1999]
 gi|425183700|ref|ZP_18581360.1| DNA polymerase [Escherichia coli FRIK1997]
 gi|425190434|ref|ZP_18587593.1| DNA polymerase [Escherichia coli NE1487]
 gi|425196731|ref|ZP_18593423.1| DNA polymerase [Escherichia coli NE037]
 gi|425203429|ref|ZP_18599591.1| DNA polymerase [Escherichia coli FRIK2001]
 gi|425209202|ref|ZP_18604974.1| DNA polymerase [Escherichia coli PA4]
 gi|425215241|ref|ZP_18610595.1| DNA polymerase [Escherichia coli PA23]
 gi|425221806|ref|ZP_18616701.1| DNA polymerase [Escherichia coli PA49]
 gi|425228060|ref|ZP_18622492.1| DNA polymerase [Escherichia coli PA45]
 gi|425234358|ref|ZP_18628352.1| DNA polymerase [Escherichia coli TT12B]
 gi|425240333|ref|ZP_18634003.1| DNA polymerase [Escherichia coli MA6]
 gi|425264519|ref|ZP_18656478.1| DNA polymerase [Escherichia coli EC96038]
 gi|425292031|ref|ZP_18682670.1| DNA polymerase [Escherichia coli PA38]
 gi|425326980|ref|ZP_18715252.1| DNA polymerase [Escherichia coli EC1846]
 gi|425333168|ref|ZP_18720937.1| DNA polymerase [Escherichia coli EC1847]
 gi|425339588|ref|ZP_18726869.1| DNA polymerase [Escherichia coli EC1848]
 gi|425345465|ref|ZP_18732313.1| DNA polymerase [Escherichia coli EC1849]
 gi|425351680|ref|ZP_18738101.1| DNA polymerase [Escherichia coli EC1850]
 gi|425357666|ref|ZP_18743680.1| DNA polymerase [Escherichia coli EC1856]
 gi|425363779|ref|ZP_18749382.1| DNA polymerase [Escherichia coli EC1862]
 gi|425370213|ref|ZP_18755219.1| DNA polymerase [Escherichia coli EC1864]
 gi|425389067|ref|ZP_18772601.1| DNA polymerase [Escherichia coli EC1866]
 gi|425389708|ref|ZP_18773203.1| DNA polymerase [Escherichia coli EC1868]
 gi|425395833|ref|ZP_18778913.1| DNA polymerase [Escherichia coli EC1869]
 gi|425407989|ref|ZP_18790181.1| DNA polymerase [Escherichia coli EC1870]
 gi|425408365|ref|ZP_18790554.1| DNA polymerase [Escherichia coli NE098]
 gi|425414634|ref|ZP_18796305.1| DNA polymerase [Escherichia coli FRIK523]
 gi|425425784|ref|ZP_18806869.1| DNA polymerase [Escherichia coli 0.1304]
 gi|428944416|ref|ZP_19017108.1| DNA polymerase II [Escherichia coli 88.1467]
 gi|428950590|ref|ZP_19022771.1| DNA polymerase II [Escherichia coli 88.1042]
 gi|428956436|ref|ZP_19028184.1| DNA polymerase II [Escherichia coli 89.0511]
 gi|428975390|ref|ZP_19045601.1| DNA polymerase II [Escherichia coli 90.2281]
 gi|428981079|ref|ZP_19050850.1| DNA polymerase II [Escherichia coli 93.0055]
 gi|428987391|ref|ZP_19056718.1| DNA polymerase II [Escherichia coli 93.0056]
 gi|428993202|ref|ZP_19062146.1| DNA polymerase II [Escherichia coli 94.0618]
 gi|428999294|ref|ZP_19067844.1| DNA polymerase II [Escherichia coli 95.0183]
 gi|429005531|ref|ZP_19073501.1| DNA polymerase II [Escherichia coli 95.1288]
 gi|429011892|ref|ZP_19079181.1| DNA polymerase II [Escherichia coli 95.0943]
 gi|429018104|ref|ZP_19084921.1| DNA polymerase II [Escherichia coli 96.0428]
 gi|429023774|ref|ZP_19090225.1| DNA polymerase II [Escherichia coli 96.0427]
 gi|429030078|ref|ZP_19095987.1| DNA polymerase II [Escherichia coli 96.0939]
 gi|429036230|ref|ZP_19101710.1| DNA polymerase II [Escherichia coli 96.0932]
 gi|429042249|ref|ZP_19107287.1| DNA polymerase II [Escherichia coli 96.0107]
 gi|429048034|ref|ZP_19112702.1| DNA polymerase II [Escherichia coli 97.0003]
 gi|429059093|ref|ZP_19123265.1| DNA polymerase II [Escherichia coli 97.0007]
 gi|429064479|ref|ZP_19128379.1| DNA polymerase II [Escherichia coli 99.0672]
 gi|429071098|ref|ZP_19134466.1| DNA polymerase [Escherichia coli 99.0678]
 gi|429076328|ref|ZP_19139558.1| DNA polymerase II [Escherichia coli 99.0713]
 gi|429823540|ref|ZP_19355097.1| DNA polymerase II [Escherichia coli 96.0109]
 gi|429829910|ref|ZP_19360829.1| DNA polymerase II [Escherichia coli 97.0010]
 gi|444928574|ref|ZP_21247746.1| DNA polymerase II [Escherichia coli 99.0814]
 gi|444933974|ref|ZP_21252939.1| DNA polymerase II [Escherichia coli 99.0815]
 gi|444939542|ref|ZP_21258212.1| DNA polymerase II [Escherichia coli 99.0816]
 gi|444945166|ref|ZP_21263604.1| DNA polymerase II [Escherichia coli 99.0839]
 gi|444950666|ref|ZP_21268910.1| DNA polymerase II [Escherichia coli 99.0848]
 gi|444956138|ref|ZP_21274163.1| DNA polymerase II [Escherichia coli 99.1753]
 gi|444961421|ref|ZP_21279199.1| DNA polymerase II [Escherichia coli 99.1775]
 gi|444967200|ref|ZP_21284686.1| DNA polymerase II [Escherichia coli 99.1793]
 gi|444978217|ref|ZP_21295225.1| DNA polymerase II [Escherichia coli ATCC 700728]
 gi|444983537|ref|ZP_21300413.1| DNA polymerase II [Escherichia coli PA11]
 gi|444988781|ref|ZP_21305532.1| DNA polymerase II [Escherichia coli PA19]
 gi|444999275|ref|ZP_21315757.1| DNA polymerase II [Escherichia coli PA13]
 gi|445005068|ref|ZP_21321422.1| DNA polymerase II [Escherichia coli PA47]
 gi|445015372|ref|ZP_21331455.1| DNA polymerase II [Escherichia coli PA48]
 gi|445021483|ref|ZP_21337417.1| DNA polymerase II [Escherichia coli 7.1982]
 gi|445026724|ref|ZP_21342513.1| DNA polymerase II [Escherichia coli 99.1781]
 gi|445037894|ref|ZP_21353377.1| DNA polymerase II [Escherichia coli PA35]
 gi|445043068|ref|ZP_21358417.1| DNA polymerase II [Escherichia coli 3.4880]
 gi|445048719|ref|ZP_21363902.1| DNA polymerase II [Escherichia coli 95.0083]
 gi|445054337|ref|ZP_21369299.1| DNA polymerase II [Escherichia coli 99.0670]
 gi|452970090|ref|ZP_21968317.1| DNA polymerase II [Escherichia coli O157:H7 str. EC4009]
 gi|12512757|gb|AAG54364.1|AE005183_1 DNA polymerase II [Escherichia coli O157:H7 str. EDL933]
 gi|13359520|dbj|BAB33487.1| DNA polymerase II [Escherichia coli O157:H7 str. Sakai]
 gi|187767760|gb|EDU31604.1| DNA polymerase II [Escherichia coli O157:H7 str. EC4196]
 gi|188014542|gb|EDU52664.1| DNA polymerase II [Escherichia coli O157:H7 str. EC4113]
 gi|189000401|gb|EDU69387.1| DNA polymerase II [Escherichia coli O157:H7 str. EC4076]
 gi|189357004|gb|EDU75423.1| DNA polymerase II [Escherichia coli O157:H7 str. EC4401]
 gi|189359882|gb|EDU78301.1| DNA polymerase II [Escherichia coli O157:H7 str. EC4486]
 gi|189365884|gb|EDU84300.1| DNA polymerase II [Escherichia coli O157:H7 str. EC4501]
 gi|189370820|gb|EDU89236.1| DNA polymerase II [Escherichia coli O157:H7 str. EC869]
 gi|208727937|gb|EDZ77538.1| DNA polymerase II [Escherichia coli O157:H7 str. EC4206]
 gi|208734391|gb|EDZ83078.1| DNA polymerase II [Escherichia coli O157:H7 str. EC4045]
 gi|208738780|gb|EDZ86462.1| DNA polymerase II [Escherichia coli O157:H7 str. EC4042]
 gi|209159556|gb|ACI36989.1| DNA polymerase II [Escherichia coli O157:H7 str. EC4115]
 gi|209746836|gb|ACI71725.1| DNA polymerase II [Escherichia coli]
 gi|209746842|gb|ACI71728.1| DNA polymerase II [Escherichia coli]
 gi|217321904|gb|EEC30328.1| DNA polymerase II [Escherichia coli O157:H7 str. TW14588]
 gi|254590598|gb|ACT69959.1| DNA polymerase II [Escherichia coli O157:H7 str. TW14359]
 gi|320190418|gb|EFW65068.1| DNA polymerase II [Escherichia coli O157:H7 str. EC1212]
 gi|320642101|gb|EFX11452.1| DNA polymerase II [Escherichia coli O157:H7 str. G5101]
 gi|326346926|gb|EGD70660.1| DNA polymerase II [Escherichia coli O157:H7 str. 1044]
 gi|377887607|gb|EHU52084.1| DNA polymerase II [Escherichia coli DEC3A]
 gi|377888734|gb|EHU53205.1| DNA polymerase II [Escherichia coli DEC3B]
 gi|377915333|gb|EHU79442.1| DNA polymerase II [Escherichia coli DEC3C]
 gi|377919614|gb|EHU83652.1| DNA polymerase II [Escherichia coli DEC3D]
 gi|377921797|gb|EHU85792.1| DNA polymerase II [Escherichia coli DEC3E]
 gi|377922247|gb|EHU86239.1| DNA polymerase II [Escherichia coli DEC4A]
 gi|377925745|gb|EHU89685.1| DNA polymerase II [Escherichia coli DEC4B]
 gi|377935648|gb|EHU99442.1| DNA polymerase II [Escherichia coli DEC4D]
 gi|377936281|gb|EHV00075.1| DNA polymerase II [Escherichia coli DEC4C]
 gi|377942585|gb|EHV06319.1| DNA polymerase II [Escherichia coli DEC4E]
 gi|377953173|gb|EHV16754.1| DNA polymerase II [Escherichia coli DEC4F]
 gi|386794079|gb|AFJ27113.1| DNA polymerase II [Escherichia coli Xuzhou21]
 gi|390651534|gb|EIN29805.1| DNA polymerase [Escherichia coli FRIK1996]
 gi|390654134|gb|EIN32187.1| DNA polymerase [Escherichia coli FDA517]
 gi|390654430|gb|EIN32476.1| DNA polymerase [Escherichia coli FDA505]
 gi|390670890|gb|EIN47378.1| DNA polymerase [Escherichia coli 93-001]
 gi|390674813|gb|EIN50978.1| DNA polymerase [Escherichia coli FRIK1990]
 gi|390676460|gb|EIN52560.1| DNA polymerase [Escherichia coli FRIK1985]
 gi|390689930|gb|EIN64832.1| DNA polymerase [Escherichia coli PA3]
 gi|390694687|gb|EIN69245.1| DNA polymerase [Escherichia coli PA5]
 gi|390709509|gb|EIN82591.1| DNA polymerase [Escherichia coli PA10]
 gi|390711890|gb|EIN84848.1| DNA polymerase [Escherichia coli PA15]
 gi|390715084|gb|EIN87951.1| DNA polymerase [Escherichia coli PA14]
 gi|390716705|gb|EIN89500.1| DNA polymerase [Escherichia coli PA25]
 gi|390721490|gb|EIN94184.1| DNA polymerase [Escherichia coli PA22]
 gi|390734989|gb|EIO06418.1| DNA polymerase [Escherichia coli PA24]
 gi|390738309|gb|EIO09527.1| DNA polymerase [Escherichia coli PA28]
 gi|390753367|gb|EIO23090.1| DNA polymerase [Escherichia coli PA31]
 gi|390753599|gb|EIO23276.1| DNA polymerase [Escherichia coli PA32]
 gi|390758062|gb|EIO27530.1| DNA polymerase [Escherichia coli PA33]
 gi|390763320|gb|EIO32569.1| DNA polymerase [Escherichia coli PA40]
 gi|390777198|gb|EIO45042.1| DNA polymerase [Escherichia coli PA41]
 gi|390781278|gb|EIO48962.1| DNA polymerase [Escherichia coli PA42]
 gi|390796120|gb|EIO63396.1| DNA polymerase [Escherichia coli TW10246]
 gi|390802806|gb|EIO69835.1| DNA polymerase [Escherichia coli TW11039]
 gi|390812600|gb|EIO79276.1| DNA polymerase [Escherichia coli TW09109]
 gi|390837963|gb|EIP02281.1| DNA polymerase [Escherichia coli EC4203]
 gi|390841074|gb|EIP05045.1| DNA polymerase [Escherichia coli EC4196]
 gi|390845411|gb|EIP09072.1| DNA polymerase [Escherichia coli TW09195]
 gi|390856730|gb|EIP19301.1| DNA polymerase [Escherichia coli TW14301]
 gi|390861445|gb|EIP23693.1| DNA polymerase [Escherichia coli EC4421]
 gi|390872482|gb|EIP33771.1| DNA polymerase [Escherichia coli EC4422]
 gi|390877692|gb|EIP38587.1| DNA polymerase [Escherichia coli EC4013]
 gi|390887510|gb|EIP47473.1| DNA polymerase [Escherichia coli EC4402]
 gi|390888858|gb|EIP48640.1| DNA polymerase [Escherichia coli EC4439]
 gi|390904678|gb|EIP63674.1| DNA polymerase [Escherichia coli EC1738]
 gi|390914183|gb|EIP72727.1| DNA polymerase [Escherichia coli EC1863]
 gi|390917621|gb|EIP76038.1| DNA polymerase [Escherichia coli EC4448]
 gi|390926629|gb|EIP84188.1| DNA polymerase [Escherichia coli EC1845]
 gi|408073548|gb|EKH07857.1| DNA polymerase [Escherichia coli PA7]
 gi|408077283|gb|EKH11491.1| DNA polymerase [Escherichia coli FRIK920]
 gi|408091902|gb|EKH25101.1| DNA polymerase [Escherichia coli FDA506]
 gi|408097641|gb|EKH30524.1| DNA polymerase [Escherichia coli FDA507]
 gi|408103822|gb|EKH36151.1| DNA polymerase [Escherichia coli FDA504]
 gi|408111251|gb|EKH43002.1| DNA polymerase [Escherichia coli FRIK1999]
 gi|408117358|gb|EKH48543.1| DNA polymerase [Escherichia coli FRIK1997]
 gi|408123055|gb|EKH53857.1| DNA polymerase [Escherichia coli NE1487]
 gi|408131352|gb|EKH61394.1| DNA polymerase [Escherichia coli NE037]
 gi|408132974|gb|EKH62891.1| DNA polymerase [Escherichia coli FRIK2001]
 gi|408142298|gb|EKH71679.1| DNA polymerase [Escherichia coli PA4]
 gi|408150892|gb|EKH79410.1| DNA polymerase [Escherichia coli PA23]
 gi|408154587|gb|EKH82918.1| DNA polymerase [Escherichia coli PA49]
 gi|408159684|gb|EKH87736.1| DNA polymerase [Escherichia coli PA45]
 gi|408167946|gb|EKH95399.1| DNA polymerase [Escherichia coli TT12B]
 gi|408174048|gb|EKI01044.1| DNA polymerase [Escherichia coli MA6]
 gi|408175760|gb|EKI02653.1| DNA polymerase [Escherichia coli EC96038]
 gi|408234591|gb|EKI57601.1| DNA polymerase [Escherichia coli PA38]
 gi|408260846|gb|EKI81895.1| DNA polymerase [Escherichia coli EC1846]
 gi|408269455|gb|EKI89700.1| DNA polymerase [Escherichia coli EC1847]
 gi|408271369|gb|EKI91496.1| DNA polymerase [Escherichia coli EC1848]
 gi|408280329|gb|EKI99881.1| DNA polymerase [Escherichia coli EC1849]
 gi|408286326|gb|EKJ05254.1| DNA polymerase [Escherichia coli EC1850]
 gi|408289472|gb|EKJ08230.1| DNA polymerase [Escherichia coli EC1856]
 gi|408301917|gb|EKJ19474.1| DNA polymerase [Escherichia coli EC1862]
 gi|408302181|gb|EKJ19716.1| DNA polymerase [Escherichia coli EC1864]
 gi|408303175|gb|EKJ20641.1| DNA polymerase [Escherichia coli EC1866]
 gi|408319764|gb|EKJ35883.1| DNA polymerase [Escherichia coli EC1868]
 gi|408320174|gb|EKJ36277.1| DNA polymerase [Escherichia coli EC1870]
 gi|408332415|gb|EKJ47450.1| DNA polymerase [Escherichia coli EC1869]
 gi|408338217|gb|EKJ52865.1| DNA polymerase [Escherichia coli NE098]
 gi|408351164|gb|EKJ64955.1| DNA polymerase [Escherichia coli FRIK523]
 gi|408353584|gb|EKJ67079.1| DNA polymerase [Escherichia coli 0.1304]
 gi|408560515|gb|EKK36778.1| DNA polymerase II [Escherichia coli 5.2239]
 gi|408561067|gb|EKK37311.1| DNA polymerase II [Escherichia coli 3.4870]
 gi|408561477|gb|EKK37680.1| DNA polymerase [Escherichia coli 6.0172]
 gi|408586126|gb|EKK60909.1| DNA polymerase II [Escherichia coli 8.0586]
 gi|408587342|gb|EKK61998.1| DNA polymerase II [Escherichia coli 10.0869]
 gi|408593809|gb|EKK68117.1| DNA polymerase [Escherichia coli 10.0833]
 gi|408606270|gb|EKK79717.1| DNA polymerase [Escherichia coli 8.0416]
 gi|408614169|gb|EKK87452.1| DNA polymerase II [Escherichia coli 88.0221]
 gi|408618270|gb|EKK91357.1| DNA polymerase II [Escherichia coli 10.0821]
 gi|427215764|gb|EKV84930.1| DNA polymerase II [Escherichia coli 88.1042]
 gi|427219205|gb|EKV88174.1| DNA polymerase II [Escherichia coli 89.0511]
 gi|427219455|gb|EKV88417.1| DNA polymerase II [Escherichia coli 88.1467]
 gi|427235361|gb|EKW02982.1| DNA polymerase II [Escherichia coli 90.2281]
 gi|427252290|gb|EKW18779.1| DNA polymerase II [Escherichia coli 93.0056]
 gi|427254099|gb|EKW20467.1| DNA polymerase II [Escherichia coli 93.0055]
 gi|427255171|gb|EKW21442.1| DNA polymerase II [Escherichia coli 94.0618]
 gi|427271637|gb|EKW36428.1| DNA polymerase II [Escherichia coli 95.0943]
 gi|427272188|gb|EKW36941.1| DNA polymerase II [Escherichia coli 95.0183]
 gi|427278871|gb|EKW43325.1| DNA polymerase II [Escherichia coli 95.1288]
 gi|427287387|gb|EKW51149.1| DNA polymerase II [Escherichia coli 96.0428]
 gi|427293318|gb|EKW56572.1| DNA polymerase II [Escherichia coli 96.0427]
 gi|427294897|gb|EKW58051.1| DNA polymerase II [Escherichia coli 96.0939]
 gi|427305595|gb|EKW68189.1| DNA polymerase II [Escherichia coli 97.0003]
 gi|427308006|gb|EKW70425.1| DNA polymerase II [Escherichia coli 96.0932]
 gi|427312303|gb|EKW74459.1| DNA polymerase II [Escherichia coli 96.0107]
 gi|427323697|gb|EKW85251.1| DNA polymerase II [Escherichia coli 97.0007]
 gi|427335403|gb|EKW96433.1| DNA polymerase II [Escherichia coli 99.0713]
 gi|427335804|gb|EKW96833.1| DNA polymerase [Escherichia coli 99.0678]
 gi|427337262|gb|EKW98180.1| DNA polymerase II [Escherichia coli 99.0672]
 gi|429260743|gb|EKY44274.1| DNA polymerase II [Escherichia coli 96.0109]
 gi|429262407|gb|EKY45748.1| DNA polymerase II [Escherichia coli 97.0010]
 gi|444543384|gb|ELV22646.1| DNA polymerase II [Escherichia coli 99.0814]
 gi|444552660|gb|ELV30438.1| DNA polymerase II [Escherichia coli 99.0815]
 gi|444566131|gb|ELV42967.1| DNA polymerase II [Escherichia coli 99.0839]
 gi|444568357|gb|ELV45032.1| DNA polymerase II [Escherichia coli 99.0816]
 gi|444572908|gb|ELV49309.1| DNA polymerase II [Escherichia coli 99.0848]
 gi|444583764|gb|ELV59452.1| DNA polymerase II [Escherichia coli 99.1753]
 gi|444586941|gb|ELV62417.1| DNA polymerase II [Escherichia coli 99.1775]
 gi|444587170|gb|ELV62640.1| DNA polymerase II [Escherichia coli 99.1793]
 gi|444601003|gb|ELV75812.1| DNA polymerase II [Escherichia coli ATCC 700728]
 gi|444601333|gb|ELV76140.1| DNA polymerase II [Escherichia coli PA11]
 gi|444602114|gb|ELV76869.1| DNA polymerase II [Escherichia coli PA13]
 gi|444616475|gb|ELV90637.1| DNA polymerase II [Escherichia coli PA19]
 gi|444618947|gb|ELV93012.1| DNA polymerase II [Escherichia coli PA48]
 gi|444633976|gb|ELW07467.1| DNA polymerase II [Escherichia coli PA47]
 gi|444649074|gb|ELW21980.1| DNA polymerase II [Escherichia coli 7.1982]
 gi|444651234|gb|ELW24043.1| DNA polymerase II [Escherichia coli 99.1781]
 gi|444664438|gb|ELW36626.1| DNA polymerase II [Escherichia coli PA35]
 gi|444668724|gb|ELW40724.1| DNA polymerase II [Escherichia coli 3.4880]
 gi|444673622|gb|ELW45248.1| DNA polymerase II [Escherichia coli 95.0083]
 gi|444675062|gb|ELW46543.1| DNA polymerase II [Escherichia coli 99.0670]
          Length = 783

 Score = 50.8 bits (120), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 57/235 (24%), Positives = 90/235 (38%), Gaps = 41/235 (17%)

Query: 741 LNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHKCILNSFYGYVMRKGARWYSME 800
           +  +W G+  EAK  GN                L  A K I+N+FYG +     R++   
Sbjct: 470 VTNIWHGR-DEAKRQGNK--------------PLSQALKIIMNAFYGVLGTTACRFFDPR 514

Query: 801 MAGVVTYTGAKIIQNARLLIEKIG-KPLELDTDGIWCVLPGSFPENFTFKTKDLKKKLTI 859
           +   +T  G +I++  + LIE  G   +  DTD  +  L G+  E    K          
Sbjct: 515 LVSSITMRGHQIMRQTKALIEAQGYDVIYGDTDSTFVWLKGAHSEEEATKIGR------- 567

Query: 860 SYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEFEVDGPYKAMILPASKEEGI 919
               ++ +V+V    T  Q Q L   +   YETH            +   ++P  +    
Sbjct: 568 ---ALVQHVNVWWAETL-QKQQLTSALELEYETH------------FCRFLMPTIRGADT 611

Query: 920 LIKKRYAVFNDDGTLAEL--KGFEIKRRGELKLIKVFQAELFDKFLHGSTIEECY 972
             KKRYA    +G    +  KG E  R     L + FQ EL+ +       +E +
Sbjct: 612 GSKKRYAGLIQEGDKQRMVFKGLETVRTDWTPLAQQFQQELYLRIFRNEPYQEYF 666



 Score = 40.8 bits (94), Expect = 7.5,   Method: Compositional matrix adjust.
 Identities = 55/241 (22%), Positives = 99/241 (41%), Gaps = 27/241 (11%)

Query: 311 IELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDKNQGECRA 370
           +E L  WFA+     P + + +N   FD   L+  A    +++   LG   D ++ E R 
Sbjct: 205 LEKLNAWFANYD---PDVIIGWNVVQFDLRMLQKHAER--YRIPLRLG--RDNSELEWRE 257

Query: 371 KFACHLDCFAWVK-----------RDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMV--- 416
               +   FA  K           + ++    S  L+ V +  LG      NP D +   
Sbjct: 258 HGFKNGVFFAQAKGRLIIDGIEALKSAFWNFSSFSLETVAQELLGEGKSIDNPWDRMDEI 317

Query: 417 --RFAKEKPQMMASYSVSDA-VATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCE 473
             RFA++KP  +A+Y++ D  + T   + T + PF+   AT+  +  D     GS     
Sbjct: 318 DRRFAEDKP-ALATYNLKDCELVTQIFHKTEIMPFLLERATVNGLPVDR--HGGSVAAFG 374

Query: 474 MLLMVQAYKANVICPNKHQSDPEKFYRNHLLESETYIGGHVECLESGVFRSDLPTSFKLD 533
            L   + ++A  + PN  +  P      ++++S   +   V  L+       +  +F +D
Sbjct: 375 HLYFPRMHRAGYVAPNLGEVPPHASPGGYVMDSRPGLYDSVLVLDYKSLYPSIIRTFLID 434

Query: 534 P 534
           P
Sbjct: 435 P 435


>gi|428962803|ref|ZP_19034024.1| DNA polymerase II [Escherichia coli 90.0091]
 gi|427237910|gb|EKW05432.1| DNA polymerase II [Escherichia coli 90.0091]
          Length = 783

 Score = 50.8 bits (120), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 57/235 (24%), Positives = 90/235 (38%), Gaps = 41/235 (17%)

Query: 741 LNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHKCILNSFYGYVMRKGARWYSME 800
           +  +W G+  EAK  GN                L  A K I+N+FYG +     R++   
Sbjct: 470 VTNIWHGR-DEAKRQGNK--------------PLSQALKIIMNAFYGVLGTTACRFFDPR 514

Query: 801 MAGVVTYTGAKIIQNARLLIEKIG-KPLELDTDGIWCVLPGSFPENFTFKTKDLKKKLTI 859
           +   +T  G +I++  + LIE  G   +  DTD  +  L G+  E    K          
Sbjct: 515 LVSSITMRGHQIMRQTKALIEAQGYDVIYGDTDSTFVWLKGAHSEEEATKIGR------- 567

Query: 860 SYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEFEVDGPYKAMILPASKEEGI 919
               ++ +V+V    T  Q Q L   +   YETH            +   ++P  +    
Sbjct: 568 ---ALVQHVNVWWAETL-QKQQLTSALELEYETH------------FCRFLMPTIRGADT 611

Query: 920 LIKKRYAVFNDDGTLAEL--KGFEIKRRGELKLIKVFQAELFDKFLHGSTIEECY 972
             KKRYA    +G    +  KG E  R     L + FQ EL+ +       +E +
Sbjct: 612 GSKKRYAGLIQEGDKQRMVFKGLETVRTDWTPLAQQFQQELYLRIFRNEPYQEYF 666


>gi|423196791|ref|ZP_17183374.1| hypothetical protein HMPREF1171_01406 [Aeromonas hydrophila SSU]
 gi|404631541|gb|EKB28172.1| hypothetical protein HMPREF1171_01406 [Aeromonas hydrophila SSU]
          Length = 816

 Score = 50.8 bits (120), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 51/198 (25%), Positives = 80/198 (40%), Gaps = 28/198 (14%)

Query: 773 SLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIG-KPLELDT 831
           +L  A K I+NSFYG +   G R+Y   +A  +T  G  I+Q  R  IE  G + +  DT
Sbjct: 516 ALSQAIKIIMNSFYGVLGSGGCRFYDPRLASSITLRGHGIMQQTREWIEGEGFEVIYGDT 575

Query: 832 DGIWCVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYE 891
           D  +  L     E    +  ++ ++L               +  ND +  L   + + ++
Sbjct: 576 DSTFVHLG---RETSPAQADEIGRRLA--------------SMINDNWTAL---IKREFD 615

Query: 892 THSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAE-----LKGFEIKRRG 946
             S   I++E    Y+  ++P  +      KKRYA         E      KG E  R  
Sbjct: 616 LPSYLEIQYETH--YRRFLMPTIRGLEKGSKKRYAGLVAGHQAGEEEQLVFKGLESVRTD 673

Query: 947 ELKLIKVFQAELFDKFLH 964
              L K FQ  L++   H
Sbjct: 674 WTPLAKAFQTRLYEMVFH 691


>gi|420100155|ref|ZP_14611346.1| DNA polymerase II [Escherichia coli O111:H11 str. CVM9455]
 gi|394421781|gb|EJE95230.1| DNA polymerase II [Escherichia coli O111:H11 str. CVM9455]
          Length = 783

 Score = 50.8 bits (120), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 57/233 (24%), Positives = 90/233 (38%), Gaps = 41/233 (17%)

Query: 741 LNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHKCILNSFYGYVMRKGARWYSME 800
           +  +W G+  EAK  GN                L  A K I+N+FYG +     R++   
Sbjct: 470 VTNIWHGR-DEAKRQGNK--------------PLSQALKIIMNAFYGVLGTTACRFFDPR 514

Query: 801 MAGVVTYTGAKIIQNARLLIEKIG-KPLELDTDGIWCVLPGSFPENFTFKTKDLKKKLTI 859
           +A  +T  G +I++  + LIE  G   +  DTD  +  L G+  E    K          
Sbjct: 515 LASSITMRGHQIMRQTKALIEAQGYDVIYGDTDSTFVWLKGAHSEEEAAKIGR------- 567

Query: 860 SYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEFEVDGPYKAMILPASKEEGI 919
               ++ +V+     T  Q Q L + +   YETH            +   ++P  +    
Sbjct: 568 ---ALVQHVNAWWAETL-QKQRLTNALELEYETH------------FCRFLMPTIRGADT 611

Query: 920 LIKKRYAVFNDDGTLAEL--KGFEIKRRGELKLIKVFQAELFDKFLHGSTIEE 970
             KKRYA    +G    +  KG E  R     L + FQ EL+ +       +E
Sbjct: 612 GSKKRYAGLIQEGDKQRMVFKGLETVRTDWTPLAQQFQQELYLRIFRNEPYQE 664



 Score = 41.2 bits (95), Expect = 6.2,   Method: Compositional matrix adjust.
 Identities = 55/241 (22%), Positives = 99/241 (41%), Gaps = 27/241 (11%)

Query: 311 IELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDKNQGECRA 370
           +E L  WFA+     P + + +N   FD   L+  A    +++   LG   D ++ E R 
Sbjct: 205 LEKLNAWFANYD---PDVIIGWNVVQFDLRMLQKHAER--YRLPLRLG--RDNSELEWRE 257

Query: 371 KFACHLDCFAWVK-----------RDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMV--- 416
               +   FA  K           + ++    S  L+ V +  LG      NP D +   
Sbjct: 258 HGFKNGVFFAQAKGRLIIDGIEALKSAFWNFSSFSLETVAQELLGEGKSIDNPWDRMDEI 317

Query: 417 --RFAKEKPQMMASYSVSDA-VATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCE 473
             RFA++KP  +A+Y++ D  + T   + T + PF+   AT+  +  D     GS     
Sbjct: 318 DRRFAEDKP-ALATYNLKDCELVTQIFHKTEIMPFLLERATVNGLPVDR--HGGSVAAFG 374

Query: 474 MLLMVQAYKANVICPNKHQSDPEKFYRNHLLESETYIGGHVECLESGVFRSDLPTSFKLD 533
            L   + ++A  + PN  +  P      ++++S   +   V  L+       +  +F +D
Sbjct: 375 HLYFPRMHRAGYVAPNLGEVPPHASPGGYVMDSRPGLYDSVLVLDYKSLYPSIIRTFLID 434

Query: 534 P 534
           P
Sbjct: 435 P 435


>gi|417246788|ref|ZP_12039889.1| DNA polymerase II [Escherichia coli 9.0111]
 gi|386209416|gb|EII19903.1| DNA polymerase II [Escherichia coli 9.0111]
          Length = 783

 Score = 50.8 bits (120), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 56/233 (24%), Positives = 88/233 (37%), Gaps = 41/233 (17%)

Query: 741 LNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHKCILNSFYGYVMRKGARWYSME 800
           +  +W G+  EAK  GN                L  A K I+N+FYG +     R++   
Sbjct: 470 VTNIWHGR-DEAKRQGNK--------------PLSQALKIIMNAFYGVLGTTACRFFDPR 514

Query: 801 MAGVVTYTGAKIIQNARLLIEKIG-KPLELDTDGIWCVLPGSFPENFTFKTKDLKKKLTI 859
           +A  +T  G +I++  + LIE  G   +  DTD  +  L G+  E    K   +  +   
Sbjct: 515 LASSITMRGHQIMRQTKALIEAQGYDVIYGDTDSTFVWLKGAHSEEEAAKIGRVLVQHVN 574

Query: 860 SYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEFEVDGPYKAMILPASKEEGI 919
           ++    L           Q Q L   +   YETH            +   ++P  +    
Sbjct: 575 AWWAETL-----------QKQRLTSALELEYETH------------FCRFLMPTIRGADT 611

Query: 920 LIKKRYAVFNDDGTLAEL--KGFEIKRRGELKLIKVFQAELFDKFLHGSTIEE 970
             KKRYA    +G    +  KG E  R     L + FQ EL+ +       +E
Sbjct: 612 GSKKRYAGLIQEGDKQRMVFKGLETVRTDWTPLAQQFQQELYLRIFRNEPYQE 664



 Score = 41.2 bits (95), Expect = 7.0,   Method: Compositional matrix adjust.
 Identities = 55/241 (22%), Positives = 99/241 (41%), Gaps = 27/241 (11%)

Query: 311 IELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQCDKNQGECRA 370
           +E L  WFA+     P + + +N   FD   L+  A    +++   LG   D ++ E R 
Sbjct: 205 LEKLNAWFANHD---PDVIIGWNVVQFDLRMLQKHAER--YRLPLRLG--RDNSELEWRE 257

Query: 371 KFACHLDCFAWVK-----------RDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMV--- 416
               +   FA  K           + ++    S  L+ V +  LG      NP D +   
Sbjct: 258 HGFKNGVFFAQAKGRLIIDGIEALKSAFWNFSSFSLETVAQELLGEGKSIDNPWDRMDEI 317

Query: 417 --RFAKEKPQMMASYSVSDA-VATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCE 473
             RFA++KP  +A+Y++ D  + T   + T + PF+   AT+  +  D     GS     
Sbjct: 318 DRRFAEDKP-ALATYNLKDCELVTQIFHKTEIMPFLLERATVNGLPVDR--HGGSVAAFG 374

Query: 474 MLLMVQAYKANVICPNKHQSDPEKFYRNHLLESETYIGGHVECLESGVFRSDLPTSFKLD 533
            L   + ++A  + PN  +  P      ++++S   +   V  L+       +  +F +D
Sbjct: 375 HLYFPRMHRAGYVAPNLGEVPPHASPGGYVMDSRPGLYDSVLVLDYKSLYPSIIRTFLID 434

Query: 534 P 534
           P
Sbjct: 435 P 435


>gi|392544407|ref|ZP_10291544.1| DNA polymerase II [Pseudoalteromonas piscicida JCM 20779]
          Length = 786

 Score = 50.8 bits (120), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 51/191 (26%), Positives = 82/191 (42%), Gaps = 25/191 (13%)

Query: 777 AHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIG-KPLELDTDGIW 835
           A K I+NSFYG +   G R++   +A  +T  G +I++  + LIE+ G + +  DTD I+
Sbjct: 493 ALKIIMNSFYGVLGSSGCRFFDTRLASSITMRGHEIMKTTKRLIEEQGYEVIYGDTDSIF 552

Query: 836 CVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSE 895
             L  +  +    +  ++ KKL I    V    ++ +    + +  L       YETH  
Sbjct: 553 VALNRAHSDR---QADNIGKKL-IKKINVWWKQELKQRFGTNSFLEL------EYETH-- 600

Query: 896 CSIEFEVDGPYKAMILPASKEEGILIKKRYA--VFNDDGTLAELKGFEIKRRGELKLIKV 953
                     Y+  ++P  +      KKRYA  V   +G     KG E  R     L + 
Sbjct: 601 ----------YRKFLMPTIRGSEAGSKKRYAGLVSKGNGEQIVFKGLESARSDWTLLAQE 650

Query: 954 FQAELFDKFLH 964
           FQ  L+    H
Sbjct: 651 FQKNLYMMVFH 661


>gi|118431730|ref|NP_148383.2| DNA polymerase II [Aeropyrum pernix K1]
 gi|152031597|sp|O93746.3|DPOL2_AERPE RecName: Full=DNA polymerase 2; AltName: Full=DNA polymerase II
 gi|116063052|dbj|BAA81109.2| family B DNA polymerase II [Aeropyrum pernix K1]
          Length = 803

 Score = 50.8 bits (120), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 66/315 (20%), Positives = 118/315 (37%), Gaps = 78/315 (24%)

Query: 58  DTRKVYSCIDLYFVSQDGSTFKSKY-KFRPYFYAATKEKMEMDVEAYLRRRYESQIADIE 116
           + R     I L+    DGS     Y +FRPYFY      + +D  A + RR     + I 
Sbjct: 19  EMRGSTPVIILWGRGADGSRVVVFYGEFRPYFYVLPDGSVGLDQLAAMIRRLSRPSSPIL 78

Query: 117 ILEKEDLDLKNHLSGLHKSYLKISFDTVQQLMDVKKDLLHVVERNQAKFDAAEAYESILT 176
            +E+    ++    G     LK++      + + ++ +                      
Sbjct: 79  SVER----VRRRFIGREVEALKVTTLVPASVREYREAVRR-------------------- 114

Query: 177 GKREQRPQDFLDCIVDLREYDVPYHIRFAIDNDVRCGQWY---------------DVSIS 221
                     L  + D+ E D+P+ +RF ID ++   +WY               D + +
Sbjct: 115 ----------LGGVRDVLEADIPFALRFIIDFNLYPMRWYVAEVREVAVPHGYSVDRAYT 164

Query: 222 STGPLLE--KRVDLLQRAEVHVCAFDIETTKLPLKFPDADYDIIMMISYMLDGQGYLIIN 279
            +G + E   R+       + V AFDIE     ++ PD   D ++MI             
Sbjct: 165 LSGDIREDETRIQEDPLKGLRVMAFDIEVYS-KMRTPDPKKDPVIMIGL----------- 212

Query: 280 RECVGEDIEDLEYTPKPEFEGYFKVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDW 339
            +  G +IE LE                 ++ +++  +   ++ + P + V YN + FDW
Sbjct: 213 -QQAGGEIEILE-------------AEDRSDKKVIAGFVERVKSIDPDVIVGYNQNRFDW 258

Query: 340 PFLETRAAHHGFKMS 354
           P+L  RA   G K++
Sbjct: 259 PYLVERARVLGVKLA 273


  Database: nr
    Posted date:  Mar 3, 2013 10:45 PM
  Number of letters in database: 999,999,864
  Number of sequences in database:  2,912,245
  
  Database: /local_scratch/syshi//blastdatabase/nr.01
    Posted date:  Mar 3, 2013 10:52 PM
  Number of letters in database: 999,999,666
  Number of sequences in database:  2,912,720
  
  Database: /local_scratch/syshi//blastdatabase/nr.02
    Posted date:  Mar 3, 2013 10:58 PM
  Number of letters in database: 999,999,938
  Number of sequences in database:  3,014,250
  
  Database: /local_scratch/syshi//blastdatabase/nr.03
    Posted date:  Mar 3, 2013 11:03 PM
  Number of letters in database: 999,999,780
  Number of sequences in database:  2,805,020
  
  Database: /local_scratch/syshi//blastdatabase/nr.04
    Posted date:  Mar 3, 2013 11:08 PM
  Number of letters in database: 999,999,551
  Number of sequences in database:  2,816,253
  
  Database: /local_scratch/syshi//blastdatabase/nr.05
    Posted date:  Mar 3, 2013 11:13 PM
  Number of letters in database: 999,999,897
  Number of sequences in database:  2,981,387
  
  Database: /local_scratch/syshi//blastdatabase/nr.06
    Posted date:  Mar 3, 2013 11:18 PM
  Number of letters in database: 999,999,649
  Number of sequences in database:  2,911,476
  
  Database: /local_scratch/syshi//blastdatabase/nr.07
    Posted date:  Mar 3, 2013 11:24 PM
  Number of letters in database: 999,999,452
  Number of sequences in database:  2,920,260
  
  Database: /local_scratch/syshi//blastdatabase/nr.08
    Posted date:  Mar 3, 2013 11:25 PM
  Number of letters in database: 64,230,274
  Number of sequences in database:  189,558
  
Lambda     K      H
   0.320    0.136    0.408 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 31,017,198,514
Number of Sequences: 23463169
Number of extensions: 1330482067
Number of successful extensions: 3155781
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 636
Number of HSP's successfully gapped in prelim test: 1258
Number of HSP's that attempted gapping in prelim test: 3144957
Number of HSP's gapped (non-prelim): 5475
length of query: 1988
length of database: 8,064,228,071
effective HSP length: 158
effective length of query: 1830
effective length of database: 8,652,014,665
effective search space: 15833186836950
effective search space used: 15833186836950
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 85 (37.4 bits)