Your job contains 1 sequence.
>000162
MEQLKFVVIDEAAQLKESESAIPLQLPCIQHAILVGDEVQLPAMVESSVSGEAYFGRSLF
ERLSYLGHPKHLLSMQYRMHPSISFFPNSYFYENKIRDAPTVRKRSYEKRFLPGPMYGPY
SFINVFGGREEFIEHSCRNMVEVSVVMKILRNLYKAWVESKEKLSIGIVSPYSAQVIAIQ
EKLGSKYEKIAGFAVKVKSIDGFQGGEEDIIIISTVRSNNTGSIGFASTPQRINVALTRA
RHCLWILGSERTLNHSESVWESLLDDAKARQCFFNIDEDKDLAKAILEVKKELDELDELL
NPGSILFRSERWKVNFSDNFLRSFKKLTSDRTKKSVINLLLKLSSGWRPKRRNVDSVSAS
SSHIIKQFKVEGFYIISTTDIVKDVKESQYIQVLKVWDILPLEDVQKLVTRLDNIFVKYT
DEFINLCKEKCFEGNLEVPKTWAVTSNIVRFKNLADNESGSDMSGAASDCRSYVENSNVT
DSLLLMKFYPLSSGIVSHLLSDRDGRELDLPFEVTDEQLEMILFPRSTFILGRSGTGKTT
ILTMKLFQNEKHHRMAKEQFDGVNNSLTLHTSWEVEAEEGLGGSERCILRQLFVTKFVLE
SRNTRNVERQEKGQLSDIFNLSQNFRTHVGVLNLAQSVIELLYRFFPHSVDILKPETSLI
YGEPPVLLESGNDENAIIKIFGNSGDAGGNMVGFGAEQVILVRDDCVRKEISNYVGKQAL
VLTIVESKGLEFQDVLLYDFFGSSPLKNQWRVVYEYMKEQALLDSTLPASFPSFNEAKHN
VLCPELKQLYVAITRTRQRLWIWENMEEFSKPMFDYWKKRLLVQVRQLDDSLAQAMQVAS
SPEEWKSRGIKLFYENNYEMATICFEKAKDTYWEGRSKATGLKAASDHIRSSNPLEANVI
LREAANIFEAIGKADSAAKCFYDLGEYERAGKIYEERCGKPELEKAGECFFLAGQYKHAA
EVYARGNFFSECLAVCSRGELFDIGLQYINYWKQHVDTDVGLVRRSKEINKVEQDFLQSC
ALHYYQLNDKKSMMKFVKAFHSMDLMRNFLKSKSCFDELLVLEEEAGNFMDAANIARLTG
DILLTADLLQKAGNFKEACNLTLNYVLSNSLWSPGSKGWPLKQFTEKKELFEKAKSLAKS
NSNQFYEFVCTEASILSNDESDLFIMNQQLNASKRHQSICGETLSARKILDCHLKTNSCK
YGWEDEFVLDLKAYSEETICRNWVTVQTLVYFWDYWKGMIVNVFEYLGCLKSQDANDYRS
YGDFCLNYLGVWKQYDNLNTIYLLLNSDAEWVSTLDNRHAPRRGKLAAINVHQLVSAGRS
YWSSELLSVGMKVLGNLEALHKQLSKNSPTVFSQVLHLTCIYEVAKFLLSSKYLNRRYYD
EKILQKFVELSTEHFFDFIFPVDWRESLEMNMITLRGTESYRNIIEEVIFKNIGLKGIPS
YGQIGTTVVMILGSGQLGNAVYQRVAKRLDENSPWKEFFESLSWNMGSESCQESASYDNS
DELKAVSHIWKFYGALVDTYRANWRGEDYITPANFLYLIERLLILLSSLKGYIFTTKSSF
VDWLIYQEGNTISTCSSLTEVQQFFGVVLDFVVTVVQNFIYKEREMIEWIQKSHTKNKQY
HSLVVLRLVVIISLLHLNFGGHSLNLLIDLLGMSYIRNKLPWEFYDALRRRRKRNLLNVI
AEAFKKIGNPLVLVSLGDNCPKFACPDAIFVDMVTKRKEDILEILFPVIEASRGHAGAAK
MKATNLQSNVLYPDCYEQGKSSSISSSSAPVQDLEITTLEVKAGDLPVKLKQFWNIFEAL
EFEDNGIDTKTIVFKSSTIKEDVKKSIQLLSAALDGCFQKNSFHGEDKSRWDEAARMLED
LKKLDAALDGVMSDWKHEHLSTLVEIYERLQSSRPKLEPLLNLLFQQYINCKGKSLETGV
ASAGNVNVENTDSNADECSGSHEGKIIPTSATSASEAQGSSQKPVSNRAGTSKSKKNKKK
KGGKKQK
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 000162
(1987 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2018561 - symbol:AT1G65810 species:3702 "Arabi... 1144 1.8e-117 3
TAIR|locus:2018536 - symbol:AT1G65780 species:3702 "Arabi... 1053 4.4e-106 2
TAIR|locus:2166173 - symbol:AT5G37150 species:3702 "Arabi... 854 5.1e-84 1
TAIR|locus:2152627 - symbol:AT5G37030 species:3702 "Arabi... 844 6.0e-83 1
TAIR|locus:2173033 - symbol:AT5G52090 species:3702 "Arabi... 840 1.6e-82 1
TAIR|locus:2166183 - symbol:AT5G37160 species:3702 "Arabi... 814 9.5e-80 1
TAIR|locus:2135472 - symbol:AT4G05540 species:3702 "Arabi... 801 2.0e-79 2
TAIR|locus:2166163 - symbol:AT5G37140 species:3702 "Arabi... 810 2.5e-79 1
UNIPROTKB|F1NFZ0 - symbol:TRANK1 "Uncharacterized protein... 520 3.7e-49 2
UNIPROTKB|F1MVI7 - symbol:TRANK1 "Uncharacterized protein... 447 9.6e-43 3
UNIPROTKB|G3MYJ1 - symbol:TRANK1 "Uncharacterized protein... 447 1.0e-42 3
UNIPROTKB|F1PCE7 - symbol:TRANK1 "Uncharacterized protein... 448 2.3e-41 3
UNIPROTKB|F1PD19 - symbol:TRANK1 "Uncharacterized protein... 448 2.3e-41 3
UNIPROTKB|J9NSW6 - symbol:TRANK1 "Uncharacterized protein... 448 2.5e-41 3
UNIPROTKB|B7WP88 - symbol:TRANK1 "TPR and ankyrin repeat-... 452 2.6e-41 3
UNIPROTKB|O15050 - symbol:TRANK1 "TPR and ankyrin repeat-... 452 5.9e-41 3
RGD|1563130 - symbol:Trank1 "tetratricopeptide repeat and... 462 1.1e-40 4
MGI|MGI:1341834 - symbol:Trank1 "tetratricopeptide repeat... 457 1.8e-40 4
TAIR|locus:2059088 - symbol:AT2G19120 "AT2G19120" species... 470 1.9e-40 1
TAIR|locus:2130384 - symbol:MAA3 "MAGATAMA 3" species:370... 460 9.7e-40 1
CGD|CAL0003335 - symbol:SEN1 species:5476 "Candida albica... 454 3.1e-38 1
TAIR|locus:2126480 - symbol:AT4G30100 species:3702 "Arabi... 447 8.5e-38 1
UNIPROTKB|G4NIZ8 - symbol:MGG_02784 "DNA-binding protein ... 439 1.2e-36 1
POMBASE|SPBC29A10.10c - symbol:SPBC29A10.10c "tRNA-splici... 438 1.5e-36 1
ZFIN|ZDB-GENE-070402-1 - symbol:setx "senataxin" species:... 432 8.5e-36 1
ASPGD|ASPL0000056713 - symbol:AN0646 species:162425 "Emer... 417 9.6e-35 1
CGD|CAL0003666 - symbol:NAM7 species:5476 "Candida albica... 414 1.8e-34 1
UNIPROTKB|Q5A507 - symbol:NAM7 "Putative uncharacterized ... 414 1.8e-34 1
SGD|S000004422 - symbol:SEN1 "Presumed helicase and subun... 443 1.9e-34 2
UNIPROTKB|G4ND47 - symbol:MGG_00976 "Regulator-nonsense t... 426 1.0e-33 2
DICTYBASE|DDB_G0289529 - symbol:DDB_G0289529 species:4468... 409 1.5e-33 1
DICTYBASE|DDB_G0268924 - symbol:DDB_G0268924 "Helicase SE... 426 5.0e-33 2
DICTYBASE|DDB_G0285243 - symbol:DDB_G0285243 "putative sp... 403 8.9e-33 1
DICTYBASE|DDB_G0268662 - symbol:DDB_G0268662 "DNA2/NAM7 h... 420 1.3e-32 2
SGD|S000004685 - symbol:NAM7 "ATP-dependent RNA helicase ... 395 1.8e-32 1
POMBASE|SPAC6G9.10c - symbol:sen1 "ATP-dependent 5' to 3'... 398 2.3e-32 1
DICTYBASE|DDB_G0268914 - symbol:DDB_G0268914 species:4468... 419 2.7e-32 2
TAIR|locus:2171007 - symbol:LBA1 "LOW-LEVEL BETA-AMYLASE ... 392 6.2e-32 1
FB|FBgn0030354 - symbol:Upf1 "Upf1" species:7227 "Drosoph... 386 2.5e-31 1
ZFIN|ZDB-GENE-040426-2836 - symbol:upf1 "upf1 regulator o... 385 2.8e-31 1
UNIPROTKB|E1C0J4 - symbol:UPF1 "Uncharacterized protein" ... 385 2.9e-31 1
UNIPROTKB|E1BEK9 - symbol:UPF1 "Uncharacterized protein" ... 385 2.9e-31 1
UNIPROTKB|E1C0J3 - symbol:UPF1 "Uncharacterized protein" ... 385 2.9e-31 1
UNIPROTKB|Q92900 - symbol:UPF1 "Regulator of nonsense tra... 385 2.9e-31 1
UNIPROTKB|E2RL81 - symbol:UPF1 "Uncharacterized protein" ... 385 2.9e-31 1
UNIPROTKB|E1C4T7 - symbol:Gga.18015 "Uncharacterized prot... 389 3.6e-31 1
MGI|MGI:107995 - symbol:Upf1 "UPF1 regulator of nonsense ... 384 3.7e-31 1
DICTYBASE|DDB_G0268660 - symbol:DDB_G0268660 "DNA2/NAM7 h... 423 5.4e-31 3
DICTYBASE|DDB_G0274399 - symbol:DDB_G0274399 "DNA2/NAM7 h... 392 1.6e-30 2
UNIPROTKB|E1BQD2 - symbol:C4H4orf21 "Uncharacterized prot... 359 1.2e-28 1
DICTYBASE|DDB_G0288923 - symbol:upf1 "regulator of nonsen... 371 7.6e-28 2
UNIPROTKB|F1PHA4 - symbol:SETX "Uncharacterized protein" ... 353 2.5e-27 1
POMBASE|SPAC16C9.06c - symbol:upf1 "ATP-dependent RNA hel... 364 3.0e-27 2
UNIPROTKB|E1BAS6 - symbol:SETX "Uncharacterized protein" ... 350 5.5e-27 1
UNIPROTKB|Q7Z333 - symbol:SETX "Probable helicase senatax... 348 9.1e-27 1
UNIPROTKB|F1S0U6 - symbol:SETX "Uncharacterized protein" ... 346 1.5e-26 1
WB|WBGene00004880 - symbol:smg-2 species:6239 "Caenorhabd... 339 2.3e-26 1
RGD|2322000 - symbol:LOC100363957 "hypothetical protein L... 354 3.5e-26 2
UNIPROTKB|E1BG37 - symbol:E1BG37 "Uncharacterized protein... 336 3.7e-26 1
UNIPROTKB|D4AEB3 - symbol:Setx "Protein Setx" species:101... 341 5.0e-26 1
MGI|MGI:2443480 - symbol:Setx "senataxin" species:10090 "... 340 6.4e-26 1
UNIPROTKB|Q6ZU11 - symbol:Q6ZU11 "Uncharacterized protein... 331 1.3e-25 1
UNIPROTKB|G5EA02 - symbol:C4orf21 "Uncharacterized protei... 331 4.4e-25 1
UNIPROTKB|I3L717 - symbol:LOC100514320 "Uncharacterized p... 248 4.6e-25 2
GENEDB_PFALCIPARUM|MAL7P1.12 - symbol:MAL7P1.12 "erythroc... 351 5.8e-25 2
UNIPROTKB|Q8IC35 - symbol:MAL7P1.12 "Erythrocyte membrane... 351 5.8e-25 2
UNIPROTKB|F1PCI1 - symbol:C4orf21 "Uncharacterized protei... 333 7.6e-24 2
POMBASE|SPCC737.07c - symbol:SPCC737.07c "DNA polymerase ... 310 1.1e-23 1
RGD|1565575 - symbol:Setx "senataxin" species:10116 "Ratt... 191 2.7e-23 2
SGD|S000000978 - symbol:ECM32 "DNA dependent ATPase/DNA h... 202 9.8e-22 2
UNIPROTKB|P38935 - symbol:IGHMBP2 "DNA-binding protein SM... 293 1.8e-21 2
TAIR|locus:2056896 - symbol:AT2G03270 species:3702 "Arabi... 288 2.5e-21 1
UNIPROTKB|E2R760 - symbol:IGHMBP2 "Uncharacterized protei... 289 4.7e-21 1
UNIPROTKB|E2R8W1 - symbol:IGHMBP2 "Uncharacterized protei... 289 4.8e-21 1
FB|FBgn0035842 - symbol:CG7504 species:7227 "Drosophila m... 291 6.1e-21 1
UNIPROTKB|F1MHU8 - symbol:IGHMBP2 "Uncharacterized protei... 294 1.5e-20 2
UNIPROTKB|F1RY71 - symbol:IGHMBP2 "Uncharacterized protei... 279 5.5e-20 1
RGD|68325 - symbol:Ighmbp2 "immunoglobulin mu binding pro... 294 8.0e-20 2
UNIPROTKB|Q9EQN5 - symbol:Ighmbp2 "DNA-binding protein SM... 294 8.0e-20 2
UNIPROTKB|Q60560 - symbol:IGHMBP2 "DNA-binding protein SM... 293 1.3e-19 2
UNIPROTKB|E1BY42 - symbol:E1BY42 "Uncharacterized protein... 286 1.3e-19 2
MGI|MGI:99954 - symbol:Ighmbp2 "immunoglobulin mu binding... 293 1.3e-19 2
UNIPROTKB|Q9BYK8 - symbol:HELZ2 "Helicase with zinc finge... 276 4.3e-19 1
TAIR|locus:2200996 - symbol:SDE3 "SILENCING DEFECTIVE" sp... 264 2.3e-18 1
DICTYBASE|DDB_G0271732 - symbol:DDB_G0271732 "AN1-type zi... 261 5.0e-18 1
TAIR|locus:2162858 - symbol:AT5G35970 species:3702 "Arabi... 257 1.2e-17 1
UNIPROTKB|E2RBM4 - symbol:PRIC285 "Uncharacterized protei... 257 5.1e-17 1
CGD|CAL0006154 - symbol:orf19.6199 species:5476 "Candida ... 249 5.3e-17 1
UNIPROTKB|Q5AAW1 - symbol:HCS1 "Putative uncharacterized ... 249 5.3e-17 1
FB|FBgn0033889 - symbol:CG6701 species:7227 "Drosophila m... 250 1.0e-16 1
ZFIN|ZDB-GENE-070424-144 - symbol:si:ch211-183d5.1 "si:ch... 243 1.1e-16 1
UNIPROTKB|Q9P2E3 - symbol:ZNFX1 "NFX1-type zinc finger-co... 251 1.4e-16 1
UNIPROTKB|F1RMM8 - symbol:LOC100519780 "Uncharacterized p... 251 2.2e-16 1
SGD|S000001500 - symbol:HCS1 "Hexameric DNA polymerase al... 241 3.5e-16 1
ZFIN|ZDB-GENE-070912-617 - symbol:si:dkey-97a13.6 "si:dke... 247 5.6e-16 1
MGI|MGI:2138982 - symbol:Znfx1 "zinc finger, NFX1-type co... 256 7.7e-16 2
UNIPROTKB|E1C0Z0 - symbol:HELZ2 "Uncharacterized protein"... 244 1.1e-15 1
RGD|1306791 - symbol:Dna2 "DNA replication helicase 2 hom... 238 1.5e-15 1
ZFIN|ZDB-GENE-091230-8 - symbol:mov10a "Moloney leukemia ... 236 2.3e-15 1
FB|FBgn0034187 - symbol:CG6967 species:7227 "Drosophila m... 230 7.6e-15 1
WARNING: Descriptions of 79 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2018561 [details] [associations]
symbol:AT1G65810 species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0048451 "petal formation"
evidence=RCA] [GO:0048453 "sepal formation" evidence=RCA]
EMBL:CP002684 GO:GO:0004386 KO:K10706 InterPro:IPR026852
PANTHER:PTHR10887:SF27 IPI:IPI01019905 RefSeq:NP_176757.1
UniGene:At.52388 ProteinModelPortal:F4IBK8 SMR:F4IBK8 PRIDE:F4IBK8
EnsemblPlants:AT1G65810.1 GeneID:842892 KEGG:ath:AT1G65810
OMA:DSEINKR ArrayExpress:F4IBK8 Uniprot:F4IBK8
Length = 1050
Score = 1144 (407.8 bits), Expect = 1.8e-117, Sum P(3) = 1.8e-117
Identities = 236/460 (51%), Positives = 310/460 (67%)
Query: 4 LKFVVIDEAAQLKESESAIPLQLPCIQHAILVGDEVQLPAMVESSVSGEAYFGRSLFERL 63
++ +VIDEAAQLKE ESAIPLQL +QHAIL+GDE QLPAM++S+++ EA GRSLFERL
Sbjct: 553 IQLLVIDEAAQLKECESAIPLQLRGLQHAILIGDEKQLPAMIKSNIASEADLGRSLFERL 612
Query: 64 SYLGHPKHLLSMQYRMHPSISFFPNSYFYENKIRDAPTVRKRSYEKRFLPGPMYGPYSFI 123
LGH K LL+MQYRMHPSIS FPN FY+ KI DAP+VR RSYEK+FLP MYGPYSFI
Sbjct: 613 VLLGHNKQLLNMQYRMHPSISIFPNREFYDMKILDAPSVRLRSYEKKFLPEKMYGPYSFI 672
Query: 124 NVFGGREEFIE-HSCRNMVEVSVVMKILRNLYKAWVESKEKLSIGIVSPYSAQVIAIQEK 182
N+ GRE+F E +S +N+VEVSVV +I+ LY ++ +S+G++SPY AQV AIQE+
Sbjct: 673 NIAYGREQFGEGYSSKNLVEVSVVAEIVSKLYSVSRKTGRTISVGVISPYKAQVFAIQER 732
Query: 183 LGSKYEKIAGFAVKVKSIDGFQGGEEDIIIISTVRSNNTGSIGFASTPQRINVALTRARH 242
+G KY F V V+S+DGFQGGEEDIIIISTVRSN G+IGF S QR NVALTRAR+
Sbjct: 733 IGEKYNTEGTFTVSVRSVDGFQGGEEDIIIISTVRSNGNGAIGFLSNQQRTNVALTRARY 792
Query: 243 CLWILGSERTLNHSESVWESLLDDAKARQCFFNIDEDKDLAKAIXXXXXXXXXXXXXXNP 302
CLWILG+E TL ++ SVW L+DDAKAR CF N +ED+ LA+ I N
Sbjct: 793 CLWILGNEATLTNNRSVWRQLVDDAKARNCFHNAEEDESLAQCIERSTTALDDLNKLQNK 852
Query: 303 GSILFRSERWKVNFSDNFLRSFKKLTSDRTKKSVINLLLKLSSGWRPKRRNVDSVSASSS 362
I F + WKV S FL+S + + K V++ L KLS+G K + + V S
Sbjct: 853 KLISFENSIWKVWLSYEFLKSLETIVDSEINKRVMSFLEKLSNG---KELHQE-VEFESE 908
Query: 363 HIIKQFKVE-GFYIISTTDIVKDVKESQYIQVLKVWDILPLEDVQKLVTRLDNIFVKYTD 421
++++Q + + G +I DI K+ +Q++QVLK+W +LP DV ++ L+ + +YT
Sbjct: 909 NLLRQHEFDDGLSLIWAIDIFKN--NNQHVQVLKIWQVLPSTDVSRVTEHLEKHYRRYTK 966
Query: 422 EFINLCKEKCFEGNLEVPKTWAVTSNIVRFKNLADNESGS 461
I+ C+ C +G+L VP W V SN K++ + S S
Sbjct: 967 GKISRCRYICSQGDLVVPMQWPVDSNSCSKKDIVSDVSRS 1006
Score = 39 (18.8 bits), Expect = 1.8e-117, Sum P(3) = 1.8e-117
Identities = 7/25 (28%), Positives = 16/25 (64%)
Query: 704 DDCVRKEISNYVGKQALVLTIVESK 728
+ C +K+I + V + +L++VE +
Sbjct: 992 NSCSKKDIVSDVSRSFALLSVVEEE 1016
Score = 37 (18.1 bits), Expect = 1.8e-117, Sum P(3) = 1.8e-117
Identities = 12/38 (31%), Positives = 17/38 (44%)
Query: 1774 LEITTLEVKAGDLPVKLKQFWNIFEALEFE-DNGIDTK 1810
+E T+ K VKLK+ W I ++ N D K
Sbjct: 1013 VEEETVSPKPIKKQVKLKKLWKIRRKVQLSTSNPKDPK 1050
>TAIR|locus:2018536 [details] [associations]
symbol:AT1G65780 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] EMBL:CP002684 GO:GO:0004386
KO:K10706 InterPro:IPR026852 PANTHER:PTHR10887:SF27 IPI:IPI00534309
RefSeq:NP_176754.1 UniGene:At.52386 ProteinModelPortal:F4IBK4
SMR:F4IBK4 PRIDE:F4IBK4 EnsemblPlants:AT1G65780.1 GeneID:842889
KEGG:ath:AT1G65780 Uniprot:F4IBK4
Length = 1065
Score = 1053 (375.7 bits), Expect = 4.4e-106, Sum P(2) = 4.4e-106
Identities = 218/449 (48%), Positives = 297/449 (66%)
Query: 4 LKFVVIDEAAQLKESESAIPLQLPCIQHAILVGDEVQLPAMVESSVSGEAYFGRSLFERL 63
++ +VIDEAAQLKE ES+IP+QLP ++H ILVGDE QLPAMVES ++ EA FGRSLFERL
Sbjct: 564 IQLLVIDEAAQLKECESSIPMQLPGLRHLILVGDERQLPAMVESQIALEAGFGRSLFERL 623
Query: 64 SYLGHPKHLLSMQYRMHPSISFFPNSYFYENKIRDAPTVRKRSYEKRFLPGPMYGPYSFI 123
+ LGH K++L++QYRMH SIS FPN Y KI DAPTVR+R+Y K++LPG MYGPYSFI
Sbjct: 624 ALLGHKKYMLNIQYRMHCSISSFPNKELYGKKILDAPTVRQRNYTKQYLPGEMYGPYSFI 683
Query: 124 NVFGGREEFIE---HSCRNMVEVSVVMKILRNLYKAWVESKEKLSIGIVSPYSAQVIAIQ 180
N+ GREE+ E S +N VEV VV I+ NL + ++K ++++G++SPY AQVIAIQ
Sbjct: 684 NIAYGREEYGEGEGRSLKNNVEVVVVAAIIANLLQVSEKTKTRINVGVISPYKAQVIAIQ 743
Query: 181 EKLGSKYEKIAG--FAVKVKSIDGFQGGEEDIIIISTVRSNNTGSIGFASTPQRINVALT 238
EK+ AG F+++++++DGFQGGEEDIII+STVRSN G +GF +R NV LT
Sbjct: 744 EKIQETSIGDAGGLFSLRIRTVDGFQGGEEDIIIVSTVRSNGVGRVGFLGNRRRTNVLLT 803
Query: 239 RARHCLWILGSERTLNHSESVWESLLDDAKARQCFFNIDEDKDLAKAIXXXXXXXXXXXX 298
RAR CLWILG+E TL +S+SVW +L+ DAK R CF + ED+ LA+AI
Sbjct: 804 RARFCLWILGNEATLMNSKSVWRNLIQDAKERGCFHSAGEDESLAQAIASTNIEF----- 858
Query: 299 XXNPGSILFRSERWKVNFSDNFLRSFKKLTSDRTKKSVINLLLKLSSGWRPKRRNVDSVS 358
P + +WK+ FSD F + ++ + T + + N L +LS GW +
Sbjct: 859 --RP----LNNSKWKLCFSDEFKKYVGEIKNPETYRKIKNFLERLSQGWLKEEETERENL 912
Query: 359 ASSSHIIKQFKVEGFY-IISTTDIVKDVKESQYIQVLKVWDILPLEDVQKLVTRLDNIFV 417
SSS ++KQ K++ II DI+K+ + Y QVLK+WD++P D + + RLD
Sbjct: 913 VSSSQLLKQSKIDDVLRIIWAVDILKE--DFHYDQVLKIWDVVPSSDAPEALKRLDLNHT 970
Query: 418 KYTDEFINLCKEKCFEGNLEVPKTWAVTS 446
YT + I CK +C G++ VP W++ S
Sbjct: 971 NYTKDEIEKCKARCIRGDIVVPMRWSIES 999
Score = 38 (18.4 bits), Expect = 4.4e-106, Sum P(2) = 4.4e-106
Identities = 12/35 (34%), Positives = 19/35 (54%)
Query: 1037 VKAFHSMDLMRNFLKSKSCFD--ELLVLEEEAGNF 1069
+K F S++L+ L S D E L +E+E +F
Sbjct: 1016 IKTFGSLNLVGEMLSSVPSNDSVEPLEVEKEEQDF 1050
>TAIR|locus:2166173 [details] [associations]
symbol:AT5G37150 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0016787
"hydrolase activity" evidence=IEA] EMBL:CP002688 GO:GO:0004386
KO:K10706 IPI:IPI01020555 RefSeq:NP_198531.2 UniGene:At.55176
ProteinModelPortal:F4K5W5 SMR:F4K5W5 PRIDE:F4K5W5
EnsemblPlants:AT5G37150.1 GeneID:833688 KEGG:ath:AT5G37150
OMA:RSVDEYY Uniprot:F4K5W5
Length = 839
Score = 854 (305.7 bits), Expect = 5.1e-84, P = 5.1e-84
Identities = 164/286 (57%), Positives = 218/286 (76%)
Query: 4 LKFVVIDEAAQLKESESAIPLQLPCIQHAILVGDEVQLPAMVESSVSGEAYFGRSLFERL 63
++ +V+DEAAQLKE ES LQLP ++HAIL+GDE QLPAMV + + +A FGRSLFERL
Sbjct: 527 VELLVVDEAAQLKECESVAALQLPGLRHAILIGDEFQLPAMVHNEMCEKAKFGRSLFERL 586
Query: 64 SYLGHPKHLLSMQYRMHPSISFFPNSYFYENKIRDAPTVRKRSYEKRFLPGPMYGPYSFI 123
LGH KHLL +QYRMHPSIS FPN FY +I+DA V++ Y+KRFL G M+G +SFI
Sbjct: 587 VLLGHNKHLLDVQYRMHPSISRFPNKEFYGGRIKDAENVKESIYQKRFLQGNMFGSFSFI 646
Query: 124 NVFGGREEFIE-HSCRNMVEVSVVMKILRNLYKAWVESKEKLSIGIVSPYSAQVIAIQEK 182
NV G+EEF + HS +NMVEV+VV +I+ NL+K E + K+S+G+VSPY Q+ AIQEK
Sbjct: 647 NVGRGKEEFGDGHSPKNMVEVAVVSEIISNLFKVSCERRMKVSVGVVSPYKGQMRAIQEK 706
Query: 183 LGSKYEKIAG--FAVKVKSIDGFQGGEEDIIIISTVRSNNTGSIGFASTPQRINVALTRA 240
+G KY ++G FA+ V+S+DGFQGGEEDIIIISTVRSN+ G +GF + QR NVALTRA
Sbjct: 707 IGDKYSSLSGQQFALNVRSVDGFQGGEEDIIIISTVRSNSNGKVGFLNNRQRANVALTRA 766
Query: 241 RHCLWILGSERTLNHSESVWESLLDDAKARQCFFNIDEDKDLAKAI 286
RHCLW++G+E TL S S+W +L+ +++ R CF++ ++ +L A+
Sbjct: 767 RHCLWVIGNETTLALSGSIWATLISESRTRGCFYDATDEMNLRNAM 812
>TAIR|locus:2152627 [details] [associations]
symbol:AT5G37030 species:3702 "Arabidopsis thaliana"
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=ISM] EMBL:CP002688 GO:GO:0004519 KO:K10706
IPI:IPI00540124 RefSeq:NP_198519.1 UniGene:At.55172
ProteinModelPortal:F4K5V7 SMR:F4K5V7 PRIDE:F4K5V7
EnsemblPlants:AT5G37030.1 GeneID:833673 KEGG:ath:AT5G37030
Uniprot:F4K5V7
Length = 638
Score = 844 (302.2 bits), Expect = 6.0e-83, P = 6.0e-83
Identities = 165/286 (57%), Positives = 214/286 (74%)
Query: 4 LKFVVIDEAAQLKESESAIPLQLPCIQHAILVGDEVQLPAMVESSVSGEAYFGRSLFERL 63
++ +V+DEAAQLKE ES LQLP ++HAIL+GDE QLPAMV + +A FGRSLFERL
Sbjct: 348 IEVLVVDEAAQLKECESVAALQLPGLRHAILIGDEFQLPAMVHNDQCEKAKFGRSLFERL 407
Query: 64 SYLGHPKHLLSMQYRMHPSISFFPNSYFYENKIRDAPTVRKRSYEKRFLPGPMYGPYSFI 123
LGH KHLL +QYRMHPSIS FP FY +I+DA V++ Y+KRFL G M+G +SFI
Sbjct: 408 VLLGHKKHLLDVQYRMHPSISRFPYKEFYGGRIKDAANVQESIYQKRFLQGNMFGSFSFI 467
Query: 124 NVFGGREEFIE-HSCRNMVEVSVVMKILRNLYKAWVESKEKLSIGIVSPYSAQVIAIQEK 182
NV G+EEF + S +NMVEV+VV +I+ NL+K E K K+S+G+++PY QV AIQE+
Sbjct: 468 NVGRGKEEFGDGDSPKNMVEVAVVSEIISNLFKVSRERKMKMSVGVITPYKGQVRAIQER 527
Query: 183 LGSKYEKIAG--FAVKVKSIDGFQGGEEDIIIISTVRSNNTGSIGFASTPQRINVALTRA 240
+ KY ++G F V V+S+DGFQGGEEDIIIISTVRSN+ G +GF S QR NVALTRA
Sbjct: 528 IRDKYSSLSGELFTVNVRSVDGFQGGEEDIIIISTVRSNSNGKVGFLSNRQRANVALTRA 587
Query: 241 RHCLWILGSERTLNHSESVWESLLDDAKARQCFFNIDEDKDLAKAI 286
RHCLW++G+E TL S S+W +L+ D+K R+CF++ +DK L A+
Sbjct: 588 RHCLWVIGNESTLARSGSIWANLISDSKRRKCFYDAKDDKRLRDAM 633
>TAIR|locus:2173033 [details] [associations]
symbol:AT5G52090 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0004519 eggNOG:COG1112
EMBL:AB015478 KO:K10706 IPI:IPI00525648 RefSeq:NP_200022.1
UniGene:At.65668 ProteinModelPortal:Q9FJ83 SMR:Q9FJ83 PRIDE:Q9FJ83
EnsemblPlants:AT5G52090.1 GeneID:835285 KEGG:ath:AT5G52090
TAIR:At5g52090 HOGENOM:HOG000083772 InParanoid:Q9FJ83 OMA:TACEASE
PhylomeDB:Q9FJ83 ProtClustDB:CLSN2686886 Genevestigator:Q9FJ83
Uniprot:Q9FJ83
Length = 676
Score = 840 (300.8 bits), Expect = 1.6e-82, P = 1.6e-82
Identities = 162/286 (56%), Positives = 214/286 (74%)
Query: 4 LKFVVIDEAAQLKESESAIPLQLPCIQHAILVGDEVQLPAMVESSVSGEAYFGRSLFERL 63
++ +V+DEAAQLKE ES LQLP ++HAIL+GDE QLPAMV + + +A FGRSLFERL
Sbjct: 364 VELLVVDEAAQLKECESVAALQLPGLRHAILIGDEFQLPAMVHNEMCEKAKFGRSLFERL 423
Query: 64 SYLGHPKHLLSMQYRMHPSISFFPNSYFYENKIRDAPTVRKRSYEKRFLPGPMYGPYSFI 123
LGH KHLL +QYRMHPSIS FPN FY +I+DA V++ Y+KRFL G M+ +SFI
Sbjct: 424 VLLGHNKHLLDVQYRMHPSISRFPNKEFYGGRIKDAENVKESIYQKRFLKGNMFDSFSFI 483
Query: 124 NVFGGREEFIE-HSCRNMVEVSVVMKILRNLYKAWVESKEKLSIGIVSPYSAQVIAIQEK 182
NV G+EEF + HS +NMVEV+V+ +I+ NLYK E + K+S+G+VSPY Q+ AIQEK
Sbjct: 484 NVGRGKEEFGDGHSPKNMVEVAVISEIISNLYKVSCERRMKVSVGVVSPYKGQMRAIQEK 543
Query: 183 LGSKYEKIAG--FAVKVKSIDGFQGGEEDIIIISTVRSNNTGSIGFASTPQRINVALTRA 240
+G KY ++G F + V+S+DGFQGGEEDIIIISTVRSN G +GF + QR NVALTRA
Sbjct: 544 IGDKYSSLSGQQFTLNVRSVDGFQGGEEDIIIISTVRSNGNGKVGFLNNRQRANVALTRA 603
Query: 241 RHCLWILGSERTLNHSESVWESLLDDAKARQCFFNIDEDKDLAKAI 286
RHCLW++G+E TL S S+W +L+ +++ R CF + ++ +L A+
Sbjct: 604 RHCLWVIGNETTLALSGSIWATLISESRTRGCFHDATDEMNLRDAM 649
>TAIR|locus:2166183 [details] [associations]
symbol:AT5G37160 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0016787
"hydrolase activity" evidence=IEA] EMBL:CP002688 GO:GO:0004519
KO:K10706 IPI:IPI00521499 RefSeq:NP_198532.1 UniGene:At.55177
ProteinModelPortal:F4K5W6 SMR:F4K5W6 PRIDE:F4K5W6
EnsemblPlants:AT5G37160.1 GeneID:833689 KEGG:ath:AT5G37160
OMA:WAELISE Uniprot:F4K5W6
Length = 871
Score = 814 (291.6 bits), Expect = 9.5e-80, P = 9.5e-80
Identities = 158/284 (55%), Positives = 209/284 (73%)
Query: 7 VVIDEAAQLKESESAIPLQLPCIQHAILVGDEVQLPAMVESSVSGEAYFGRSLFERLSYL 66
+V+DE AQLKE ES LQLP + HA+L+GDE QLPAMV + +A FGRSLFERL +
Sbjct: 563 LVVDETAQLKECESVAALQLPGLCHALLIGDEYQLPAMVHNEECDKAKFGRSLFERLVLI 622
Query: 67 GHPKHLLSMQYRMHPSISFFPNSYFYENKIRDAPTVRKRSYEKRFLPGPMYGPYSFINVF 126
GH KHLL++QYRMHPSIS FPN FY +I DA V++ YEKRFL G M+G +SFINV
Sbjct: 623 GHSKHLLNVQYRMHPSISRFPNKEFYGGRITDAANVQESIYEKRFLQGNMFGTFSFINVG 682
Query: 127 GGREEFIE-HSCRNMVEVSVVMKILRNLYKAWVESKEKLSIGIVSPYSAQVIAIQEKLGS 185
G+EEF + HS +NMVEV+V+ KI+ NL+K + K+K+S+G++SPY QV AIQE++G
Sbjct: 683 RGKEEFGDGHSPKNMVEVAVISKIISNLFKVSSQRKQKMSVGVISPYKGQVRAIQERVGD 742
Query: 186 KYEKIAG---FAVKVKSIDGFQGGEEDIIIISTVRSNNTGSIGFASTPQRINVALTRARH 242
KY ++ F + V+S+DGFQGGE D+IIISTVR N G++GF S QR NVALTRARH
Sbjct: 743 KYNSLSVDQLFTLNVQSVDGFQGGEVDVIIISTVRCNVNGNVGFLSNRQRANVALTRARH 802
Query: 243 CLWILGSERTLNHSESVWESLLDDAKARQCFFNIDEDKDLAKAI 286
CLW++G+ TL S S+W L+ +++ R CF++ +DK+L A+
Sbjct: 803 CLWVIGNGTTLALSGSIWAELISESRTRGCFYDAVDDKNLRDAM 846
>TAIR|locus:2135472 [details] [associations]
symbol:AT4G05540 species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] EMBL:CP002687 GO:GO:0004386
KO:K10706 IPI:IPI00530269 RefSeq:NP_567301.2 UniGene:At.54170
ProteinModelPortal:F4JGH5 SMR:F4JGH5 PRIDE:F4JGH5
EnsemblPlants:AT4G05540.1 GeneID:825906 KEGG:ath:AT4G05540
OMA:WVIGNER Uniprot:F4JGH5
Length = 689
Score = 801 (287.0 bits), Expect = 2.0e-79, Sum P(2) = 2.0e-79
Identities = 159/259 (61%), Positives = 200/259 (77%)
Query: 4 LKFVVIDEAAQLKESESAIPLQLPCIQHAILVGDEVQLPAMVESSVSGEAYFGRSLFERL 63
+ +V+DEAAQLKE ES LQL + HA+L+GDE+QLPAMV+S V +A F RSLFERL
Sbjct: 431 IDMLVVDEAAQLKECESVAALQLQGLHHAVLIGDELQLPAMVQSEVCEKAKFVRSLFERL 490
Query: 64 SYLGHPKHLLSMQYRMHPSISFFPNSYFYENKIRDAPTVRKRSYEKRFLPGPMYGPYSFI 123
LGH KHLL++QYRMHPSIS FPN FY KI DA V++ +Y+KRFL G M+G +SFI
Sbjct: 491 DSLGHKKHLLNVQYRMHPSISLFPNMEFYGGKISDAEIVKESTYQKRFLQGNMFGSFSFI 550
Query: 124 NVFGGREEFIE-HSCRNMVEVSVVMKILRNLYKAWVESKEKLSIGIVSPYSAQVIAIQEK 182
NV G+EEF + HS +NMVE++VV +IL NL K E+K K+S+G++SPY AQV AIQE+
Sbjct: 551 NVGLGKEEFGDGHSPKNMVEIAVVSEILTNLLKVSSETKTKMSVGVISPYKAQVSAIQER 610
Query: 183 LGSKYEKIAG--FAVKVKSIDGFQGGEEDIIIISTVRSNNTGSIGFASTPQRINVALTRA 240
+G KY ++ F + V+S+DGFQGGEEDIIIISTVRSN G+IGF S QR NVALTRA
Sbjct: 611 IGDKYTSVSDNLFTLNVRSVDGFQGGEEDIIIISTVRSNCNGNIGFLSNRQRANVALTRA 670
Query: 241 RHCLWILGSERTLNHSESV 259
RHCLW++G+ERTL+ S S+
Sbjct: 671 RHCLWVIGNERTLSLSGSI 689
Score = 42 (19.8 bits), Expect = 2.0e-79, Sum P(2) = 2.0e-79
Identities = 9/20 (45%), Positives = 11/20 (55%)
Query: 791 VAITRTRQRLWIWENMEEFS 810
VA+TR R LW+ N S
Sbjct: 665 VALTRARHCLWVIGNERTLS 684
>TAIR|locus:2166163 [details] [associations]
symbol:AT5G37140 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0016787
"hydrolase activity" evidence=IEA] EMBL:CP002688 GO:GO:0004519
KO:K10706 IPI:IPI00534313 RefSeq:NP_198530.1 UniGene:At.55175
ProteinModelPortal:F4K5W4 SMR:F4K5W4 PRIDE:F4K5W4
EnsemblPlants:AT5G37140.1 GeneID:833686 KEGG:ath:AT5G37140
OMA:TEAKYEH ArrayExpress:F4K5W4 Uniprot:F4K5W4
Length = 692
Score = 810 (290.2 bits), Expect = 2.5e-79, P = 2.5e-79
Identities = 160/282 (56%), Positives = 210/282 (74%)
Query: 7 VVIDEAAQLKESESAIPLQLPCIQHAILVGDEVQLPAMVESSVSGEAYFGRSLFERLSYL 66
+V+DEAAQLKE ES LQL ++HA+L+GDE+QLPAMV + EA FGRSLFERL L
Sbjct: 388 LVVDEAAQLKECESVAALQLSGLRHAVLIGDELQLPAMVHN----EAKFGRSLFERLVLL 443
Query: 67 GHPKHLLSMQYRMHPSISFFPNSYFYENKIRDAPTVRKRSYEKRFLPGPMYGPYSFINVF 126
GH KHLL++QYRMHPSIS FPN FY +I+DA V++ Y+KRFL G M+G +SFINV
Sbjct: 444 GHNKHLLNVQYRMHPSISRFPNKEFYGGRIKDAANVQESIYQKRFLQGNMFGSFSFINVG 503
Query: 127 GGREEFIE-HSCRNMVEVSVVMKILRNLYKAWVESKEKLSIGIVSPYSAQVIAIQEKLGS 185
G EEF + HS +NMVEV+V+ +I+ NL+K E + K+S+G+VSPY QV AIQE+ +
Sbjct: 504 RGEEEFGDGHSPKNMVEVAVISEIISNLFKVSSERRIKMSVGVVSPYKGQVRAIQERTTN 563
Query: 186 KYEKIAG-FAVKVKSIDGFQGGEEDIIIISTVRSNNTGSIGFASTPQRINVALTRARHCL 244
KY ++G F + V+S+DGFQGGEEDIIIISTVRSN G +GF + QR NVALTRARHCL
Sbjct: 564 KYSSLSGLFTLNVRSVDGFQGGEEDIIIISTVRSNGNGKVGFLNNRQRANVALTRARHCL 623
Query: 245 WILGSERTLNHSESVWESLLDDAKARQCFFNIDEDKDLAKAI 286
W++G+E TL S S W L+ +++ CF++ ++K+L A+
Sbjct: 624 WVIGNETTLALSGSSWAKLISESRTLGCFYDAADEKNLRDAM 665
>UNIPROTKB|F1NFZ0 [details] [associations]
symbol:TRANK1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0004003
"ATP-dependent DNA helicase activity" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] InterPro:IPR002110 InterPro:IPR000212
InterPro:IPR014016 InterPro:IPR014017 Pfam:PF00580 Pfam:PF13361
SMART:SM00248 GO:GO:0005524 GO:GO:0003677 Gene3D:1.25.40.20
InterPro:IPR020683 SUPFAM:SSF48403 PROSITE:PS50297 GO:GO:0004003
PANTHER:PTHR11070 OMA:EQHIHLE GeneTree:ENSGT00620000088104
EMBL:AADN02001320 IPI:IPI00602149 Ensembl:ENSGALT00000019695
Uniprot:F1NFZ0
Length = 2477
Score = 520 (188.1 bits), Expect = 3.7e-49, Sum P(2) = 3.7e-49
Identities = 159/527 (30%), Positives = 257/527 (48%)
Query: 597 FVLESRNTRNVERQEKGQLSDIFNLSQNFRTHVGVLNLAQSVIELLYRFFPHSVDILKPE 656
F S+NT + ++Q + I+ L QN+R+H G+L+LA V++LL +FP S D L +
Sbjct: 982 FHYASKNTVD-KKQRVRKPKRIYQLYQNYRSHSGILSLASGVVDLLQYYFPESFDRLPKD 1040
Query: 657 TSLIYGEPPVLLESGNDENAIIKIFGNSGDAGGNMVGFGAEQVILVRDDCVRKEISNYVG 716
L G P +LES + + I + GN + FGA QV+LV ++ +++I +
Sbjct: 1041 CGLFDGPKPTVLESCSFSDLAILLRGNKRKT--QPIEFGAHQVVLVANETAKEKIPEELS 1098
Query: 717 KQALVLTIVESKGLEFQDVLLYDFFGSSPLKNQWRVVYEY------------MKEQALLD 764
ALVLT+ E+KGLEF DVLLY+FF S +W+++ Y + E L D
Sbjct: 1099 L-ALVLTVYEAKGLEFDDVLLYNFFTDSEASKEWKIISSYTPDSDVQVGSKLLIEMPLED 1157
Query: 765 STLPASFP-SFNEAKHNVLCPELKQLYVAITRTRQRLWIWENMEEFSKPMFDYWKKRLLV 823
+T P SFN + +L ELKQLY AITR R LWI++ + P F Y+ KR V
Sbjct: 1158 ATAMQKRPTSFNAEMYKMLNGELKQLYTAITRARVNLWIFDENSDKRAPAFKYFIKRGFV 1217
Query: 824 QVRQLDDS--LAQAMQV-ASSPEEWKSRGIKLFYENNYEMATICFEKAKDTYWEGRSKAT 880
QV + D++ L +M SSPEEW ++G +E+A C++K G ++ +
Sbjct: 1218 QVVKTDENKDLDDSMFAKTSSPEEWIAQGDYYAKHQFWEVAAKCYQKG------GAAEKS 1271
Query: 881 GLKAASD-----HIRSSNPLEANVILREAANIFEAIGKADSAAKCFYDLGEYERAGKIYE 935
L A D H + S+P E + A + G+ + KC + E+ ++
Sbjct: 1272 KLALAHDAVLKVHSKKSSPREKQMEYMTLAKTYLECGEPKLSLKCLFQSKEF----RLCA 1327
Query: 936 ERCGKPELEKAGECFFLAGQ-YKHAAEVYARGNFFSECLAVCSRGELFDIGLQYINYWKQ 994
E C K K ++ Q YK A+E Y + F + + + EL++ + + +++
Sbjct: 1328 ELCKKLGKMKDAAVYYQKNQCYKEASECYEQIEEFDLAIKMYCQEELYEEAAKAVERYEE 1387
Query: 995 HVDTDVGLVRRSKEINKVEQDFLQSCALHYYQLNDKKSMMKFVKAFHSMDLMRNFLKSKS 1054
++ +V SK Q +L++ A Y +N + MM+ + D + FLKS+
Sbjct: 1388 MLNARGQMV--SKLSCTANQLYLEAAA-KYLSVNRIEEMMQVLSKLDIEDQLE-FLKSRG 1443
Query: 1055 CFDELLVLEEEAGNFMDAANIARLTGDILLTADLLQKAGNFKEACNL 1101
C + L + G +AA + + G L A+L F+ +C L
Sbjct: 1444 CLHQTADLLKREGRQEEAAKLMKQHGYALEAANLTA-IKEFRASCLL 1489
Score = 100 (40.3 bits), Expect = 3.7e-49, Sum P(2) = 3.7e-49
Identities = 44/180 (24%), Positives = 83/180 (46%)
Query: 376 ISTTDIVKDVKESQ---YIQVLKVWDILPLEDVQKLVTRLDNIFVKYTDEFINLCKEKCF 432
I T+ K + E Y +++++W I+ D KL LDNI + Y + ++K
Sbjct: 414 IMETEQTKSLPEKSGRVYTEMIRIWAIVL--DHCKLNRVLDNICLSYNRGLSCILRKK-L 470
Query: 433 EGNLEVPKTWAVTSNIVRFKNLADNESGSDMSGAASDCRSYVENSNVTDSLLLMKFYPLS 492
+G E + + VT + R + + S + + S +MKF+ S
Sbjct: 471 KGINEGHQNYNVTMH-KRVPRCYVEDLEREKSKEHTIPEYFPPASAAEMEYNIMKFHSFS 529
Query: 493 SGIVSHLLSDRDGRELDLPFEVTDEQLEMI-LFPRST---FILGRSGTGKTTILTMKLFQ 548
+ + ++++D ++ PF V + + +I L P+ ++GRSGTGKTT +L++
Sbjct: 530 TNMALNIINDVHSA-VEYPFRVGELEYAVIDLNPKPMEPIILIGRSGTGKTTCCLYRLWK 588
Score = 42 (19.8 bits), Expect = 4.7e-43, Sum P(2) = 4.7e-43
Identities = 10/40 (25%), Positives = 22/40 (55%)
Query: 534 SG-TGKTTILTMKLFQNEKHHRMAKEQFDGVNNSLTLHTS 572
SG T + + T + K+ +++K++ + + N LT+ S
Sbjct: 192 SGNTARNDVKTQSSVKT-KNDQLSKQEMEKIKNPLTMQES 230
>UNIPROTKB|F1MVI7 [details] [associations]
symbol:TRANK1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0016787 "hydrolase activity" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] InterPro:IPR002110 InterPro:IPR011990
InterPro:IPR013026 InterPro:IPR014016 InterPro:IPR014017
Pfam:PF13361 PROSITE:PS50293 PROSITE:PS51198 SMART:SM00248
GO:GO:0005524 Gene3D:1.25.40.20 InterPro:IPR020683 SUPFAM:SSF48403
PROSITE:PS50297 GO:GO:0016787 Gene3D:1.25.40.10
GeneTree:ENSGT00620000088104 EMBL:DAAA02053634 IPI:IPI00710435
Ensembl:ENSBTAT00000028598 Uniprot:F1MVI7
Length = 2871
Score = 447 (162.4 bits), Expect = 9.6e-43, Sum P(3) = 9.6e-43
Identities = 158/526 (30%), Positives = 246/526 (46%)
Query: 597 FVLESRNTRNVERQ-EKGQLSDIFNLSQNFRTHVGVLNLAQSVIELLYRFFPHSVDILKP 655
F SRN V++Q + I L QN+R+H G+LNLA V++LL +FP S D L
Sbjct: 1389 FHYASRNA--VDKQCAVRKPKKIHQLYQNYRSHSGILNLASGVVDLLQFYFPESFDRLPR 1446
Query: 656 ETSLIYGEPPVLLESGNDENAIIKIFGNSGDAGGNMVGFGAEQVILVRDDCVRKEISNYV 715
++ L G P++LES + + I + GN + FGA QVILV ++ +++I +
Sbjct: 1447 DSGLFDGPRPIVLESCSVSDLAILLRGNKRKT--QPIEFGAHQVILVANEMAKEKIPEEL 1504
Query: 716 GKQALVLTIVESKGLEFQDVLLYDFFGSSPLKNQWRVVYEYM------KEQAL------L 763
G ALVLT+ E+KGLEF DVLLY+FF S +W+++ + +E++ L
Sbjct: 1505 GL-ALVLTVYEAKGLEFDDVLLYNFFTDSEAYKEWKIISSFTPSSSGCREESQPMIEVPL 1563
Query: 764 D--STLPASFPSFNEAKHNVLCPELKQLYVAITRTRQRLWIWENMEEFSKPMFDYWKKRL 821
D S+ + N + +L ELKQLY AITR R LWI++ E P F Y+ KR
Sbjct: 1564 DNCSSSQGRAVTMNPEMYKLLNGELKQLYTAITRARVNLWIFDENPEKRAPAFKYFMKRK 1623
Query: 822 LVQVRQLDDS--LAQAMQV-ASSPEEWKSRGIKLFYENNYEMATICFEKAKDTYWEGRSK 878
V+V + D++ L +M V S+P EW ++G +++A C++K E +
Sbjct: 1624 FVEVVKTDENKDLDDSMFVKTSTPGEWIAQGDYYAKHQCWKVAAKCYQKGGALEKEKLAL 1683
Query: 879 A--TGLKAASDHIRSSNPLEANVILREAANIFEAIGKADSAAKCFYDLGEYERAGKIYEE 936
A T L S + E V E A + + KC E++ ++ E
Sbjct: 1684 AHNTALNMKSKKVSLK---EKQVEYLELAKTYLECKEPKLCLKCLSYAKEFQLCAQLCE- 1739
Query: 937 RCGKPELEKAGECFFLAGQ-YKHAAEVYARGNFFSECLAVCSRGELFDIGLQYINYWKQH 995
R GK + F+ Q YK A+ + + F L + + ELF+ + +++
Sbjct: 1740 RLGKV---RDAAYFYKRSQCYKDASRCFEQIQEFDLALKMYCQEELFEEAAMAVEKYEEM 1796
Query: 996 VDTDVGLVRRSKEINKVEQDFLQSCALHYYQLNDKKSMMKFVKAFHSMDLMRNFLKSKSC 1055
+ V SK Q +L++ A Y +N K MM + D + FL S+
Sbjct: 1797 LRAKALPV--SKLTYSASQFYLEAAA-KYLSMNKTKEMMAVLSKLDIEDQLV-FLTSRKR 1852
Query: 1056 FDELLVLEEEAGNFMDAANIARLTGDILLTADLLQKAGNFKEACNL 1101
E L G +AA + + G LL A L +F+ +C L
Sbjct: 1853 LTEAADLLNREGRREEAALLMKQHG-CLLEAARLTADKDFQASCLL 1897
Score = 132 (51.5 bits), Expect = 9.6e-43, Sum P(3) = 9.6e-43
Identities = 56/205 (27%), Positives = 95/205 (46%)
Query: 390 YIQVLKVWDILPLEDVQKLVTRLDNIFVKYTDEFINLCKEKCFEGNL-EVPKTWAVTSNI 448
Y +++++WDI+ D KL + I Y + ++K N V + I
Sbjct: 834 YTEIIRIWDIVL--DHNKLSYSIQAICSAYNRGLSCILRKKLKGINKGPVSANMKIQKWI 891
Query: 449 VRFKNLADNESGSDMSGAASDCRSYVENSNVTDSLLLMKFYPLSSGIVSHLLSDRDGREL 508
R + D E+ + GA ++ + S V +MKF+ S+ + S++L+D +
Sbjct: 892 PRCY-VEDTEA--EKGGARAEPEYFPPASAVETEYNIMKFHSFSTNMASNILNDTTAT-V 947
Query: 509 DLPFEVTDEQLEMI-LFPRST---FILGRSGTGKTTILTMKLFQNEKHHRMAKEQFDG-- 562
+ PF V + + +I L PR ++GRSGTGKTT +L++ + H K Q G
Sbjct: 948 EYPFRVGELEYAVIGLNPRPLEPIILIGRSGTGKTTCCLYRLWK-KFHGYWEKAQQAGSP 1006
Query: 563 -VNNSLTLHTSWEVEA-EEGLGGSE 585
+ + L E+E +EG GG E
Sbjct: 1007 LLAKQIWLKRRLELEPRKEGQGGEE 1031
Score = 40 (19.1 bits), Expect = 9.6e-43, Sum P(3) = 9.6e-43
Identities = 10/24 (41%), Positives = 12/24 (50%)
Query: 1822 DVKKSIQLLSAALDGCFQKNSFHG 1845
DV + +L ALD C Q N G
Sbjct: 1909 DVDLTKAILREALDLCHQTNQVSG 1932
>UNIPROTKB|G3MYJ1 [details] [associations]
symbol:TRANK1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0016787 "hydrolase activity" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] InterPro:IPR002110 InterPro:IPR011990
InterPro:IPR013026 InterPro:IPR014016 InterPro:IPR014017
Pfam:PF13361 PROSITE:PS50293 PROSITE:PS51198 SMART:SM00248
GO:GO:0005524 Gene3D:1.25.40.20 InterPro:IPR020683 SUPFAM:SSF48403
PROSITE:PS50297 GO:GO:0016787 Gene3D:1.25.40.10 OMA:EQHIHLE
GeneTree:ENSGT00620000088104 EMBL:DAAA02053634
Ensembl:ENSBTAT00000065280 Uniprot:G3MYJ1
Length = 2932
Score = 447 (162.4 bits), Expect = 1.0e-42, Sum P(3) = 1.0e-42
Identities = 158/526 (30%), Positives = 246/526 (46%)
Query: 597 FVLESRNTRNVERQ-EKGQLSDIFNLSQNFRTHVGVLNLAQSVIELLYRFFPHSVDILKP 655
F SRN V++Q + I L QN+R+H G+LNLA V++LL +FP S D L
Sbjct: 1450 FHYASRNA--VDKQCAVRKPKKIHQLYQNYRSHSGILNLASGVVDLLQFYFPESFDRLPR 1507
Query: 656 ETSLIYGEPPVLLESGNDENAIIKIFGNSGDAGGNMVGFGAEQVILVRDDCVRKEISNYV 715
++ L G P++LES + + I + GN + FGA QVILV ++ +++I +
Sbjct: 1508 DSGLFDGPRPIVLESCSVSDLAILLRGNKRKT--QPIEFGAHQVILVANEMAKEKIPEEL 1565
Query: 716 GKQALVLTIVESKGLEFQDVLLYDFFGSSPLKNQWRVVYEYM------KEQAL------L 763
G ALVLT+ E+KGLEF DVLLY+FF S +W+++ + +E++ L
Sbjct: 1566 GL-ALVLTVYEAKGLEFDDVLLYNFFTDSEAYKEWKIISSFTPSSSGCREESQPMIEVPL 1624
Query: 764 D--STLPASFPSFNEAKHNVLCPELKQLYVAITRTRQRLWIWENMEEFSKPMFDYWKKRL 821
D S+ + N + +L ELKQLY AITR R LWI++ E P F Y+ KR
Sbjct: 1625 DNCSSSQGRAVTMNPEMYKLLNGELKQLYTAITRARVNLWIFDENPEKRAPAFKYFMKRK 1684
Query: 822 LVQVRQLDDS--LAQAMQV-ASSPEEWKSRGIKLFYENNYEMATICFEKAKDTYWEGRSK 878
V+V + D++ L +M V S+P EW ++G +++A C++K E +
Sbjct: 1685 FVEVVKTDENKDLDDSMFVKTSTPGEWIAQGDYYAKHQCWKVAAKCYQKGGALEKEKLAL 1744
Query: 879 A--TGLKAASDHIRSSNPLEANVILREAANIFEAIGKADSAAKCFYDLGEYERAGKIYEE 936
A T L S + E V E A + + KC E++ ++ E
Sbjct: 1745 AHNTALNMKSKKVSLK---EKQVEYLELAKTYLECKEPKLCLKCLSYAKEFQLCAQLCE- 1800
Query: 937 RCGKPELEKAGECFFLAGQ-YKHAAEVYARGNFFSECLAVCSRGELFDIGLQYINYWKQH 995
R GK + F+ Q YK A+ + + F L + + ELF+ + +++
Sbjct: 1801 RLGKV---RDAAYFYKRSQCYKDASRCFEQIQEFDLALKMYCQEELFEEAAMAVEKYEEM 1857
Query: 996 VDTDVGLVRRSKEINKVEQDFLQSCALHYYQLNDKKSMMKFVKAFHSMDLMRNFLKSKSC 1055
+ V SK Q +L++ A Y +N K MM + D + FL S+
Sbjct: 1858 LRAKALPV--SKLTYSASQFYLEAAA-KYLSMNKTKEMMAVLSKLDIEDQLV-FLTSRKR 1913
Query: 1056 FDELLVLEEEAGNFMDAANIARLTGDILLTADLLQKAGNFKEACNL 1101
E L G +AA + + G LL A L +F+ +C L
Sbjct: 1914 LTEAADLLNREGRREEAALLMKQHG-CLLEAARLTADKDFQASCLL 1958
Score = 132 (51.5 bits), Expect = 1.0e-42, Sum P(3) = 1.0e-42
Identities = 56/205 (27%), Positives = 95/205 (46%)
Query: 390 YIQVLKVWDILPLEDVQKLVTRLDNIFVKYTDEFINLCKEKCFEGNL-EVPKTWAVTSNI 448
Y +++++WDI+ D KL + I Y + ++K N V + I
Sbjct: 895 YTEIIRIWDIVL--DHNKLSYSIQAICSAYNRGLSCILRKKLKGINKGPVSANMKIQKWI 952
Query: 449 VRFKNLADNESGSDMSGAASDCRSYVENSNVTDSLLLMKFYPLSSGIVSHLLSDRDGREL 508
R + D E+ + GA ++ + S V +MKF+ S+ + S++L+D +
Sbjct: 953 PRCY-VEDTEA--EKGGARAEPEYFPPASAVETEYNIMKFHSFSTNMASNILNDTTAT-V 1008
Query: 509 DLPFEVTDEQLEMI-LFPRST---FILGRSGTGKTTILTMKLFQNEKHHRMAKEQFDG-- 562
+ PF V + + +I L PR ++GRSGTGKTT +L++ + H K Q G
Sbjct: 1009 EYPFRVGELEYAVIGLNPRPLEPIILIGRSGTGKTTCCLYRLWK-KFHGYWEKAQQAGSP 1067
Query: 563 -VNNSLTLHTSWEVEA-EEGLGGSE 585
+ + L E+E +EG GG E
Sbjct: 1068 LLAKQIWLKRRLELEPRKEGQGGEE 1092
Score = 40 (19.1 bits), Expect = 1.0e-42, Sum P(3) = 1.0e-42
Identities = 10/24 (41%), Positives = 12/24 (50%)
Query: 1822 DVKKSIQLLSAALDGCFQKNSFHG 1845
DV + +L ALD C Q N G
Sbjct: 1970 DVDLTKAILREALDLCHQTNQVSG 1993
>UNIPROTKB|F1PCE7 [details] [associations]
symbol:TRANK1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR002110
InterPro:IPR011990 InterPro:IPR013026 InterPro:IPR014016
InterPro:IPR014017 Pfam:PF00580 Pfam:PF13361 PROSITE:PS50293
SMART:SM00248 GO:GO:0005524 Gene3D:1.25.40.20 InterPro:IPR020683
SUPFAM:SSF48403 PROSITE:PS50297 GO:GO:0016787 Gene3D:1.25.40.10
GeneTree:ENSGT00620000088104 EMBL:AAEX03013477
Ensembl:ENSCAFT00000036550 Uniprot:F1PCE7
Length = 2935
Score = 448 (162.8 bits), Expect = 2.3e-41, Sum P(3) = 2.3e-41
Identities = 160/526 (30%), Positives = 249/526 (47%)
Query: 597 FVLESRNTRNVERQ-EKGQLSDIFNLSQNFRTHVGVLNLAQSVIELLYRFFPHSVDILKP 655
F SR+T V++Q + I L QN+R+H G+LNLA V++LL +FP S D L
Sbjct: 1455 FHYASRST--VDKQCAVRKPKKIHQLYQNYRSHSGILNLASGVVDLLQFYFPESFDRLPR 1512
Query: 656 ETSLIYGEPPVLLESGNDENAIIKIFGNSGDAGGNMVGFGAEQVILVRDDCVRKEISNYV 715
++ L G P +LES + + I + GN + FGA QVILV ++ +++I +
Sbjct: 1513 DSGLFDGPKPTVLESCSVSDLAILLRGNKRKT--QPIEFGAHQVILVANEMAKEKIPEEL 1570
Query: 716 GKQALVLTIVESKGLEFQDVLLYDFFGSSPLKNQWRVVYEYM-------KEQ-ALLDSTL 767
G ALVLT+ E+KGLEF DVLLY+FF S +W+++ + KE L++ L
Sbjct: 1571 GL-ALVLTVYEAKGLEFDDVLLYNFFTDSEAYKEWKIISSFTPSSSDSRKENWPLIEVPL 1629
Query: 768 PASFPS------FNEAKHNVLCPELKQLYVAITRTRQRLWIWENMEEFSKPMFDYWKKRL 821
S S N + +L ELKQLY AITR R LWI++ E P F Y+ +R
Sbjct: 1630 EKSSSSQGRSLMMNPEMYKLLNGELKQLYTAITRARVNLWIFDENPEKRAPAFKYFMRRD 1689
Query: 822 LVQVRQLDDS--LAQAMQV-ASSPEEWKSRGIKLFYENNYEMATICFEKAKDTYWEGRSK 878
VQV + D++ +M V S+PEEW ++G +++A C++K E +
Sbjct: 1690 FVQVVKTDENKDFDDSMFVKTSTPEEWIAQGDYYAKHQCWKVAAKCYQKGGAFEKEKLAL 1749
Query: 879 A--TGLKAASDHIRSSNPLEANVILREAANIFEAIGKADSAAKCFYDLGEYERAGKIYEE 936
A T L S + +P E + E A + + + KC E++ + ++ E
Sbjct: 1750 AHNTALNMKSKKV---SPKEKQMEYLELARTYLECKEPKLSLKCLSYAKEFQLSAQLCE- 1805
Query: 937 RCGKPELEKAGECFFLAGQ-YKHAAEVYARGNFFSECLAVCSRGELFDIGLQYINYWKQH 995
+ GK + A F+ Q YK A + + F L + + ELF+ + +++
Sbjct: 1806 KLGK--IRDAAY-FYKRSQCYKDAFRCFEQIQEFDLALKMYCQEELFEEAAIAVEKYEEM 1862
Query: 996 VDTDVGLVRRSKEINKVEQDFLQSCALHYYQLNDKKSMMKFVKAFHSMDLMRNFLKSKSC 1055
+ + SK Q +L++ A Y N K MM + D + FLKS+
Sbjct: 1863 LRAKTLPI--SKLSYSASQFYLEAAA-KYLSANKIKEMMAVLSKLDIEDQLV-FLKSRGR 1918
Query: 1056 FDELLVLEEEAGNFMDAANIARLTGDILLTADLLQKAGNFKEACNL 1101
E L G +AA + + G LL A L +F+ +C L
Sbjct: 1919 LAEAADLLNREGRREEAALLMKQHG-CLLEAARLTADKDFQASCLL 1963
Score = 115 (45.5 bits), Expect = 2.3e-41, Sum P(3) = 2.3e-41
Identities = 56/208 (26%), Positives = 96/208 (46%)
Query: 390 YIQVLKVWDILPLEDVQKLVTRLDNIFVKYTDEFINLCKEKCFEG--NLEVPKTWAVTSN 447
Y +++++WDI+ D KL + I Y + ++K +G +V V
Sbjct: 901 YTEIIRIWDIVL--DHCKLSDSIKAICSAYNRGLSCVLRKK-LKGIHQGQVSANMKVQKR 957
Query: 448 IVRFKNLADNESGSDMSGAASDCRSYVENSNVTDSLLLMKFYPLSSGIVSHLLSDRDGRE 507
I R + D E+ + S + + S V +MKF+ S+ + ++LSD
Sbjct: 958 IPRCY-VEDTEA--EKSREHMNPEYFPPASAVETEYNIMKFHSFSTSMAFNILSDTT-TT 1013
Query: 508 LDLPFEVTDEQLEMI-LFPRST---FILGRSGTGKTTILTMKLFQNEKHHRMAKEQFDGV 563
++ PF V + + +I L PR ++GRSGTGKTT +L++ K H + E+ +
Sbjct: 1014 VEYPFRVGELEYAVIDLNPRPLEPIILIGRSGTGKTTCCLYRLWK--KFH-IYWEKAEQA 1070
Query: 564 NNSLTLHTSW-----EVE-AEEGLGGSE 585
+ L W EVE +++GLG E
Sbjct: 1071 GSPLLAKQMWLKRRLEVEPSKDGLGMEE 1098
Score = 43 (20.2 bits), Expect = 2.3e-41, Sum P(3) = 2.3e-41
Identities = 10/24 (41%), Positives = 13/24 (54%)
Query: 1822 DVKKSIQLLSAALDGCFQKNSFHG 1845
DV+ + +L ALD C Q N G
Sbjct: 1975 DVEHTKAILREALDLCCQTNQLSG 1998
>UNIPROTKB|F1PD19 [details] [associations]
symbol:TRANK1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR002110
InterPro:IPR011990 InterPro:IPR013026 InterPro:IPR014016
InterPro:IPR014017 Pfam:PF00580 Pfam:PF13361 PROSITE:PS50293
SMART:SM00248 GO:GO:0005524 Gene3D:1.25.40.20 InterPro:IPR020683
SUPFAM:SSF48403 PROSITE:PS50297 GO:GO:0016787 Gene3D:1.25.40.10
GeneTree:ENSGT00620000088104 EMBL:AAEX03013477
Ensembl:ENSCAFT00000007678 Uniprot:F1PD19
Length = 2936
Score = 448 (162.8 bits), Expect = 2.3e-41, Sum P(3) = 2.3e-41
Identities = 160/526 (30%), Positives = 249/526 (47%)
Query: 597 FVLESRNTRNVERQ-EKGQLSDIFNLSQNFRTHVGVLNLAQSVIELLYRFFPHSVDILKP 655
F SR+T V++Q + I L QN+R+H G+LNLA V++LL +FP S D L
Sbjct: 1456 FHYASRST--VDKQCAVRKPKKIHQLYQNYRSHSGILNLASGVVDLLQFYFPESFDRLPR 1513
Query: 656 ETSLIYGEPPVLLESGNDENAIIKIFGNSGDAGGNMVGFGAEQVILVRDDCVRKEISNYV 715
++ L G P +LES + + I + GN + FGA QVILV ++ +++I +
Sbjct: 1514 DSGLFDGPKPTVLESCSVSDLAILLRGNKRKT--QPIEFGAHQVILVANEMAKEKIPEEL 1571
Query: 716 GKQALVLTIVESKGLEFQDVLLYDFFGSSPLKNQWRVVYEYM-------KEQ-ALLDSTL 767
G ALVLT+ E+KGLEF DVLLY+FF S +W+++ + KE L++ L
Sbjct: 1572 GL-ALVLTVYEAKGLEFDDVLLYNFFTDSEAYKEWKIISSFTPSSSDSRKENWPLIEVPL 1630
Query: 768 PASFPS------FNEAKHNVLCPELKQLYVAITRTRQRLWIWENMEEFSKPMFDYWKKRL 821
S S N + +L ELKQLY AITR R LWI++ E P F Y+ +R
Sbjct: 1631 EKSSSSQGRSLMMNPEMYKLLNGELKQLYTAITRARVNLWIFDENPEKRAPAFKYFMRRD 1690
Query: 822 LVQVRQLDDS--LAQAMQV-ASSPEEWKSRGIKLFYENNYEMATICFEKAKDTYWEGRSK 878
VQV + D++ +M V S+PEEW ++G +++A C++K E +
Sbjct: 1691 FVQVVKTDENKDFDDSMFVKTSTPEEWIAQGDYYAKHQCWKVAAKCYQKGGAFEKEKLAL 1750
Query: 879 A--TGLKAASDHIRSSNPLEANVILREAANIFEAIGKADSAAKCFYDLGEYERAGKIYEE 936
A T L S + +P E + E A + + + KC E++ + ++ E
Sbjct: 1751 AHNTALNMKSKKV---SPKEKQMEYLELARTYLECKEPKLSLKCLSYAKEFQLSAQLCE- 1806
Query: 937 RCGKPELEKAGECFFLAGQ-YKHAAEVYARGNFFSECLAVCSRGELFDIGLQYINYWKQH 995
+ GK + A F+ Q YK A + + F L + + ELF+ + +++
Sbjct: 1807 KLGK--IRDAAY-FYKRSQCYKDAFRCFEQIQEFDLALKMYCQEELFEEAAIAVEKYEEM 1863
Query: 996 VDTDVGLVRRSKEINKVEQDFLQSCALHYYQLNDKKSMMKFVKAFHSMDLMRNFLKSKSC 1055
+ + SK Q +L++ A Y N K MM + D + FLKS+
Sbjct: 1864 LRAKTLPI--SKLSYSASQFYLEAAA-KYLSANKIKEMMAVLSKLDIEDQLV-FLKSRGR 1919
Query: 1056 FDELLVLEEEAGNFMDAANIARLTGDILLTADLLQKAGNFKEACNL 1101
E L G +AA + + G LL A L +F+ +C L
Sbjct: 1920 LAEAADLLNREGRREEAALLMKQHG-CLLEAARLTADKDFQASCLL 1964
Score = 115 (45.5 bits), Expect = 2.3e-41, Sum P(3) = 2.3e-41
Identities = 56/208 (26%), Positives = 96/208 (46%)
Query: 390 YIQVLKVWDILPLEDVQKLVTRLDNIFVKYTDEFINLCKEKCFEG--NLEVPKTWAVTSN 447
Y +++++WDI+ D KL + I Y + ++K +G +V V
Sbjct: 902 YTEIIRIWDIVL--DHCKLSDSIKAICSAYNRGLSCVLRKK-LKGIHQGQVSANMKVQKR 958
Query: 448 IVRFKNLADNESGSDMSGAASDCRSYVENSNVTDSLLLMKFYPLSSGIVSHLLSDRDGRE 507
I R + D E+ + S + + S V +MKF+ S+ + ++LSD
Sbjct: 959 IPRCY-VEDTEA--EKSREHMNPEYFPPASAVETEYNIMKFHSFSTSMAFNILSDTT-TT 1014
Query: 508 LDLPFEVTDEQLEMI-LFPRST---FILGRSGTGKTTILTMKLFQNEKHHRMAKEQFDGV 563
++ PF V + + +I L PR ++GRSGTGKTT +L++ K H + E+ +
Sbjct: 1015 VEYPFRVGELEYAVIDLNPRPLEPIILIGRSGTGKTTCCLYRLWK--KFH-IYWEKAEQA 1071
Query: 564 NNSLTLHTSW-----EVE-AEEGLGGSE 585
+ L W EVE +++GLG E
Sbjct: 1072 GSPLLAKQMWLKRRLEVEPSKDGLGMEE 1099
Score = 43 (20.2 bits), Expect = 2.3e-41, Sum P(3) = 2.3e-41
Identities = 10/24 (41%), Positives = 13/24 (54%)
Query: 1822 DVKKSIQLLSAALDGCFQKNSFHG 1845
DV+ + +L ALD C Q N G
Sbjct: 1976 DVEHTKAILREALDLCCQTNQLSG 1999
>UNIPROTKB|J9NSW6 [details] [associations]
symbol:TRANK1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR002110
InterPro:IPR011990 InterPro:IPR013026 InterPro:IPR014016
InterPro:IPR014017 InterPro:IPR019734 Pfam:PF00580 Pfam:PF13361
PROSITE:PS50293 SMART:SM00028 SMART:SM00248 GO:GO:0005524
Gene3D:1.25.40.20 InterPro:IPR020683 SUPFAM:SSF48403
PROSITE:PS50297 GO:GO:0016787 Gene3D:1.25.40.10 OMA:EQHIHLE
GeneTree:ENSGT00620000088104 EMBL:AAEX03013477
Ensembl:ENSCAFT00000043491 Uniprot:J9NSW6
Length = 2979
Score = 448 (162.8 bits), Expect = 2.5e-41, Sum P(3) = 2.5e-41
Identities = 160/526 (30%), Positives = 249/526 (47%)
Query: 597 FVLESRNTRNVERQ-EKGQLSDIFNLSQNFRTHVGVLNLAQSVIELLYRFFPHSVDILKP 655
F SR+T V++Q + I L QN+R+H G+LNLA V++LL +FP S D L
Sbjct: 1499 FHYASRST--VDKQCAVRKPKKIHQLYQNYRSHSGILNLASGVVDLLQFYFPESFDRLPR 1556
Query: 656 ETSLIYGEPPVLLESGNDENAIIKIFGNSGDAGGNMVGFGAEQVILVRDDCVRKEISNYV 715
++ L G P +LES + + I + GN + FGA QVILV ++ +++I +
Sbjct: 1557 DSGLFDGPKPTVLESCSVSDLAILLRGNKRKT--QPIEFGAHQVILVANEMAKEKIPEEL 1614
Query: 716 GKQALVLTIVESKGLEFQDVLLYDFFGSSPLKNQWRVVYEYM-------KEQ-ALLDSTL 767
G ALVLT+ E+KGLEF DVLLY+FF S +W+++ + KE L++ L
Sbjct: 1615 GL-ALVLTVYEAKGLEFDDVLLYNFFTDSEAYKEWKIISSFTPSSSDSRKENWPLIEVPL 1673
Query: 768 PASFPS------FNEAKHNVLCPELKQLYVAITRTRQRLWIWENMEEFSKPMFDYWKKRL 821
S S N + +L ELKQLY AITR R LWI++ E P F Y+ +R
Sbjct: 1674 EKSSSSQGRSLMMNPEMYKLLNGELKQLYTAITRARVNLWIFDENPEKRAPAFKYFMRRD 1733
Query: 822 LVQVRQLDDS--LAQAMQV-ASSPEEWKSRGIKLFYENNYEMATICFEKAKDTYWEGRSK 878
VQV + D++ +M V S+PEEW ++G +++A C++K E +
Sbjct: 1734 FVQVVKTDENKDFDDSMFVKTSTPEEWIAQGDYYAKHQCWKVAAKCYQKGGAFEKEKLAL 1793
Query: 879 A--TGLKAASDHIRSSNPLEANVILREAANIFEAIGKADSAAKCFYDLGEYERAGKIYEE 936
A T L S + +P E + E A + + + KC E++ + ++ E
Sbjct: 1794 AHNTALNMKSKKV---SPKEKQMEYLELARTYLECKEPKLSLKCLSYAKEFQLSAQLCE- 1849
Query: 937 RCGKPELEKAGECFFLAGQ-YKHAAEVYARGNFFSECLAVCSRGELFDIGLQYINYWKQH 995
+ GK + A F+ Q YK A + + F L + + ELF+ + +++
Sbjct: 1850 KLGK--IRDAAY-FYKRSQCYKDAFRCFEQIQEFDLALKMYCQEELFEEAAIAVEKYEEM 1906
Query: 996 VDTDVGLVRRSKEINKVEQDFLQSCALHYYQLNDKKSMMKFVKAFHSMDLMRNFLKSKSC 1055
+ + SK Q +L++ A Y N K MM + D + FLKS+
Sbjct: 1907 LRAKTLPI--SKLSYSASQFYLEAAA-KYLSANKIKEMMAVLSKLDIEDQLV-FLKSRGR 1962
Query: 1056 FDELLVLEEEAGNFMDAANIARLTGDILLTADLLQKAGNFKEACNL 1101
E L G +AA + + G LL A L +F+ +C L
Sbjct: 1963 LAEAADLLNREGRREEAALLMKQHG-CLLEAARLTADKDFQASCLL 2007
Score = 115 (45.5 bits), Expect = 2.5e-41, Sum P(3) = 2.5e-41
Identities = 56/208 (26%), Positives = 96/208 (46%)
Query: 390 YIQVLKVWDILPLEDVQKLVTRLDNIFVKYTDEFINLCKEKCFEG--NLEVPKTWAVTSN 447
Y +++++WDI+ D KL + I Y + ++K +G +V V
Sbjct: 945 YTEIIRIWDIVL--DHCKLSDSIKAICSAYNRGLSCVLRKK-LKGIHQGQVSANMKVQKR 1001
Query: 448 IVRFKNLADNESGSDMSGAASDCRSYVENSNVTDSLLLMKFYPLSSGIVSHLLSDRDGRE 507
I R + D E+ + S + + S V +MKF+ S+ + ++LSD
Sbjct: 1002 IPRCY-VEDTEA--EKSREHMNPEYFPPASAVETEYNIMKFHSFSTSMAFNILSDTT-TT 1057
Query: 508 LDLPFEVTDEQLEMI-LFPRST---FILGRSGTGKTTILTMKLFQNEKHHRMAKEQFDGV 563
++ PF V + + +I L PR ++GRSGTGKTT +L++ K H + E+ +
Sbjct: 1058 VEYPFRVGELEYAVIDLNPRPLEPIILIGRSGTGKTTCCLYRLWK--KFH-IYWEKAEQA 1114
Query: 564 NNSLTLHTSW-----EVE-AEEGLGGSE 585
+ L W EVE +++GLG E
Sbjct: 1115 GSPLLAKQMWLKRRLEVEPSKDGLGMEE 1142
Score = 43 (20.2 bits), Expect = 2.5e-41, Sum P(3) = 2.5e-41
Identities = 10/24 (41%), Positives = 13/24 (54%)
Query: 1822 DVKKSIQLLSAALDGCFQKNSFHG 1845
DV+ + +L ALD C Q N G
Sbjct: 2019 DVEHTKAILREALDLCCQTNQLSG 2042
>UNIPROTKB|B7WP88 [details] [associations]
symbol:TRANK1 "TPR and ankyrin repeat-containing protein 1"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004003 "ATP-dependent DNA helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000212
InterPro:IPR014016 InterPro:IPR014017 Pfam:PF00580 Pfam:PF13361
GO:GO:0005524 GO:GO:0003677 GO:GO:0004003 PANTHER:PTHR11070
EMBL:AC011816 EMBL:AC097360 EMBL:AC105749 HGNC:HGNC:29011
HOGENOM:HOG000168939 HOVERGEN:HBG108082 ChiTaRS:TRANK1
IPI:IPI00927835 Ensembl:ENST00000301807 Ensembl:ENST00000428977
Uniprot:B7WP88
Length = 2375
Score = 452 (164.2 bits), Expect = 2.6e-41, Sum P(3) = 2.6e-41
Identities = 160/524 (30%), Positives = 249/524 (47%)
Query: 597 FVLESRNTRNVERQ-EKGQLSDIFNLSQNFRTHVGVLNLAQSVIELLYRFFPHSVDILKP 655
F SRNT +++Q + I L QN+R+H G+LNLA V++LL +FP S D L
Sbjct: 891 FHYASRNT--IDKQCAVRKPKKIHQLYQNYRSHSGILNLASGVVDLLQFYFPESFDRLPR 948
Query: 656 ETSLIYGEPPVLLESGNDENAIIKIFGNSGDAGGNMVGFGAEQVILVRDDCVRKEISNYV 715
++ L G P +LES + + I + GN + FGA QVILV ++ +++I +
Sbjct: 949 DSGLFDGPKPTVLESCSVSDLAILLRGNKRKT--QPIEFGAHQVILVANETAKEKIPEEL 1006
Query: 716 GKQALVLTIVESKGLEFQDVLLYDFFGSSPLKNQWRVVYEYM------KEQ--ALLDSTL 767
G ALVLTI E+KGLEF DVLLY+FF S +W+++ + +E+ L++ L
Sbjct: 1007 GL-ALVLTIYEAKGLEFDDVLLYNFFTDSEAYKEWKIISSFTPTSTDSREENRPLVEVPL 1065
Query: 768 --PASFPS----FNEAKHNVLCPELKQLYVAITRTRQRLWIWENMEEFSKPMFDYWKKRL 821
P S N + +L ELKQLY AITR R LWI++ E P F Y+ +R
Sbjct: 1066 DKPGSSQGRSLMVNPEMYKLLNGELKQLYTAITRARVNLWIFDENREKRAPAFKYFIRRD 1125
Query: 822 LVQVRQLDDS--LAQAMQV-ASSPEEWKSRGIKLFYENNYEMATICFEKAKDTYWEGRSK 878
VQV + D++ +M V S+P EW ++G +++A C++K E +
Sbjct: 1126 FVQVVKTDENKDFDDSMFVKTSTPAEWIAQGDYYAKHQCWKVAAKCYQKGGAFEKEKLAL 1185
Query: 879 ATGLKAASDHIRSSNPLEANVILREAANIFEAIGKADSAAKCFYDLGEYERAGKIYEERC 938
A A S + +P E + E A + + + KC E++ + ++ E R
Sbjct: 1186 AHDT-ALSMKSKKVSPKEKQLEYLELAKTYLECKEPTLSLKCLSYAKEFQLSAQLCE-RL 1243
Query: 939 GKPELEKAGECFFLAGQ-YKHAAEVYARGNFFSECLAVCSRGELFDIGLQYINYWKQHVD 997
GK + A F+ Q YK A + + F L + + ELF+ + +++ +
Sbjct: 1244 GK--IRDAAY-FYKRSQCYKDAFRCFEQIQEFDLALKMYCQEELFEEAAIAVEKYEEMLK 1300
Query: 998 TDVGLVRRSKEINKVEQDFLQSCALHYYQLNDKKSMMKFVKAFHSMDLMRNFLKSKSCFD 1057
T + SK Q +L++ A Y N K MM + D + FLKS+
Sbjct: 1301 TKTLPI--SKLSYSASQFYLEAAA-KYLSANKMKEMMAVLSKLDIEDQLV-FLKSRKRLA 1356
Query: 1058 ELLVLEEEAGNFMDAANIARLTGDILLTADLLQKAGNFKEACNL 1101
E L G +AA + + G LL A L +F+ +C L
Sbjct: 1357 EAADLLNREGRREEAALLMKQHG-CLLEAARLTADKDFQASCLL 1399
Score = 108 (43.1 bits), Expect = 2.6e-41, Sum P(3) = 2.6e-41
Identities = 53/207 (25%), Positives = 91/207 (43%)
Query: 390 YIQVLKVWDILPLEDVQKLVTRLDNIFVKYTDEFINLCKEKCFEGNL-EVPKTWAVTSNI 448
Y +++++WDI+ D KL + I Y + ++K N +V + I
Sbjct: 341 YTEIIRIWDIVL--DHCKLADSIKAICNAYNRGLSCVLRKKLKGINKGQVSANMKIQKRI 398
Query: 449 VRFKNLADNESGSDMSGAASDCRSYVENSNVTDSLLLMKFYPLSSGIVSHLLSDRDGREL 508
R + D E+ + + S V +MKF+ S+ + ++L+D +
Sbjct: 399 PRCY-VEDTEAEKGREHVNPEY--FPPASAVETEYNIMKFHSFSTNMAFNILNDTTAT-V 454
Query: 509 DLPFEVTDEQLEMI-LFPRST---FILGRSGTGKTTILTMKLFQNEKHHRMAKEQFDGVN 564
+ PF V + + +I L PR ++GRSGTGKTT +L++ K H + E+ +
Sbjct: 455 EYPFRVGELEYAVIDLNPRPLEPIILIGRSGTGKTTCCLYRLWK--KFH-VYWEKAEQAG 511
Query: 565 NSLTLHTSW-----EVE-AEEGLGGSE 585
+ L W EVE +E GG E
Sbjct: 512 SPLLAKQVWLKRRLEVEPGKESPGGEE 538
Score = 42 (19.8 bits), Expect = 2.6e-41, Sum P(3) = 2.6e-41
Identities = 8/24 (33%), Positives = 13/24 (54%)
Query: 1822 DVKKSIQLLSAALDGCFQKNSFHG 1845
D++ + +L ALD C+Q G
Sbjct: 1411 DIEHTKDILREALDICYQTGQLSG 1434
Score = 39 (18.8 bits), Expect = 4.0e-34, Sum P(3) = 4.0e-34
Identities = 9/24 (37%), Positives = 14/24 (58%)
Query: 139 NMVEVSVVMKILRNLYKAWVESKE 162
N +VS MKI + + + +VE E
Sbjct: 384 NKGQVSANMKIQKRIPRCYVEDTE 407
>UNIPROTKB|O15050 [details] [associations]
symbol:TRANK1 "TPR and ankyrin repeat-containing protein 1"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] InterPro:IPR002110
InterPro:IPR011990 InterPro:IPR013026 InterPro:IPR014016
InterPro:IPR014017 Pfam:PF00580 Pfam:PF13361 PROSITE:PS50005
PROSITE:PS50088 PROSITE:PS50293 SMART:SM00248 GO:GO:0005524
Gene3D:1.25.40.20 InterPro:IPR020683 SUPFAM:SSF48403
PROSITE:PS50297 GO:GO:0016787 Gene3D:1.25.40.10 EMBL:AC011816
EMBL:AC097360 EMBL:AC105749 EMBL:AB002340 EMBL:AK096678
IPI:IPI00847543 RefSeq:NP_055646.2 UniGene:Hs.170999
ProteinModelPortal:O15050 SMR:O15050 IntAct:O15050
PhosphoSite:O15050 PaxDb:O15050 PRIDE:O15050
Ensembl:ENST00000429976 GeneID:9881 KEGG:hsa:9881 UCSC:uc003cgj.3
CTD:9881 GeneCards:GC03M036845 H-InvDB:HIX0003166 HGNC:HGNC:29011
HPA:HPA035508 neXtProt:NX_O15050 PharmGKB:PA165698606
eggNOG:NOG67722 HOGENOM:HOG000168939 HOVERGEN:HBG108082 OMA:EQHIHLE
OrthoDB:EOG46Q6RM ChiTaRS:TRANK1 GenomeRNAi:9881 NextBio:37241
ArrayExpress:O15050 Bgee:O15050 Genevestigator:O15050
Uniprot:O15050
Length = 2925
Score = 452 (164.2 bits), Expect = 5.9e-41, Sum P(3) = 5.9e-41
Identities = 160/524 (30%), Positives = 249/524 (47%)
Query: 597 FVLESRNTRNVERQ-EKGQLSDIFNLSQNFRTHVGVLNLAQSVIELLYRFFPHSVDILKP 655
F SRNT +++Q + I L QN+R+H G+LNLA V++LL +FP S D L
Sbjct: 1441 FHYASRNT--IDKQCAVRKPKKIHQLYQNYRSHSGILNLASGVVDLLQFYFPESFDRLPR 1498
Query: 656 ETSLIYGEPPVLLESGNDENAIIKIFGNSGDAGGNMVGFGAEQVILVRDDCVRKEISNYV 715
++ L G P +LES + + I + GN + FGA QVILV ++ +++I +
Sbjct: 1499 DSGLFDGPKPTVLESCSVSDLAILLRGNKRKT--QPIEFGAHQVILVANETAKEKIPEEL 1556
Query: 716 GKQALVLTIVESKGLEFQDVLLYDFFGSSPLKNQWRVVYEYM------KEQ--ALLDSTL 767
G ALVLTI E+KGLEF DVLLY+FF S +W+++ + +E+ L++ L
Sbjct: 1557 GL-ALVLTIYEAKGLEFDDVLLYNFFTDSEAYKEWKIISSFTPTSTDSREENRPLVEVPL 1615
Query: 768 --PASFPS----FNEAKHNVLCPELKQLYVAITRTRQRLWIWENMEEFSKPMFDYWKKRL 821
P S N + +L ELKQLY AITR R LWI++ E P F Y+ +R
Sbjct: 1616 DKPGSSQGRSLMVNPEMYKLLNGELKQLYTAITRARVNLWIFDENREKRAPAFKYFIRRD 1675
Query: 822 LVQVRQLDDS--LAQAMQV-ASSPEEWKSRGIKLFYENNYEMATICFEKAKDTYWEGRSK 878
VQV + D++ +M V S+P EW ++G +++A C++K E +
Sbjct: 1676 FVQVVKTDENKDFDDSMFVKTSTPAEWIAQGDYYAKHQCWKVAAKCYQKGGAFEKEKLAL 1735
Query: 879 ATGLKAASDHIRSSNPLEANVILREAANIFEAIGKADSAAKCFYDLGEYERAGKIYEERC 938
A A S + +P E + E A + + + KC E++ + ++ E R
Sbjct: 1736 AHDT-ALSMKSKKVSPKEKQLEYLELAKTYLECKEPTLSLKCLSYAKEFQLSAQLCE-RL 1793
Query: 939 GKPELEKAGECFFLAGQ-YKHAAEVYARGNFFSECLAVCSRGELFDIGLQYINYWKQHVD 997
GK + A F+ Q YK A + + F L + + ELF+ + +++ +
Sbjct: 1794 GK--IRDAAY-FYKRSQCYKDAFRCFEQIQEFDLALKMYCQEELFEEAAIAVEKYEEMLK 1850
Query: 998 TDVGLVRRSKEINKVEQDFLQSCALHYYQLNDKKSMMKFVKAFHSMDLMRNFLKSKSCFD 1057
T + SK Q +L++ A Y N K MM + D + FLKS+
Sbjct: 1851 TKTLPI--SKLSYSASQFYLEAAA-KYLSANKMKEMMAVLSKLDIEDQLV-FLKSRKRLA 1906
Query: 1058 ELLVLEEEAGNFMDAANIARLTGDILLTADLLQKAGNFKEACNL 1101
E L G +AA + + G LL A L +F+ +C L
Sbjct: 1907 EAADLLNREGRREEAALLMKQHG-CLLEAARLTADKDFQASCLL 1949
Score = 108 (43.1 bits), Expect = 5.9e-41, Sum P(3) = 5.9e-41
Identities = 53/207 (25%), Positives = 91/207 (43%)
Query: 390 YIQVLKVWDILPLEDVQKLVTRLDNIFVKYTDEFINLCKEKCFEGNL-EVPKTWAVTSNI 448
Y +++++WDI+ D KL + I Y + ++K N +V + I
Sbjct: 891 YTEIIRIWDIVL--DHCKLADSIKAICNAYNRGLSCVLRKKLKGINKGQVSANMKIQKRI 948
Query: 449 VRFKNLADNESGSDMSGAASDCRSYVENSNVTDSLLLMKFYPLSSGIVSHLLSDRDGREL 508
R + D E+ + + S V +MKF+ S+ + ++L+D +
Sbjct: 949 PRCY-VEDTEAEKGREHVNPEY--FPPASAVETEYNIMKFHSFSTNMAFNILNDTTAT-V 1004
Query: 509 DLPFEVTDEQLEMI-LFPRST---FILGRSGTGKTTILTMKLFQNEKHHRMAKEQFDGVN 564
+ PF V + + +I L PR ++GRSGTGKTT +L++ K H + E+ +
Sbjct: 1005 EYPFRVGELEYAVIDLNPRPLEPIILIGRSGTGKTTCCLYRLWK--KFH-VYWEKAEQAG 1061
Query: 565 NSLTLHTSW-----EVE-AEEGLGGSE 585
+ L W EVE +E GG E
Sbjct: 1062 SPLLAKQVWLKRRLEVEPGKESPGGEE 1088
Score = 42 (19.8 bits), Expect = 5.9e-41, Sum P(3) = 5.9e-41
Identities = 8/24 (33%), Positives = 13/24 (54%)
Query: 1822 DVKKSIQLLSAALDGCFQKNSFHG 1845
D++ + +L ALD C+Q G
Sbjct: 1961 DIEHTKDILREALDICYQTGQLSG 1984
Score = 39 (18.8 bits), Expect = 8.8e-34, Sum P(3) = 8.8e-34
Identities = 9/24 (37%), Positives = 14/24 (58%)
Query: 139 NMVEVSVVMKILRNLYKAWVESKE 162
N +VS MKI + + + +VE E
Sbjct: 934 NKGQVSANMKIQKRIPRCYVEDTE 957
>RGD|1563130 [details] [associations]
symbol:Trank1 "tetratricopeptide repeat and ankyrin repeat
containing 1" species:10116 "Rattus norvegicus" [GO:0005524 "ATP
binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR002110 InterPro:IPR011990
InterPro:IPR013026 InterPro:IPR014017 Pfam:PF13361 PROSITE:PS50088
PROSITE:PS50293 SMART:SM00248 RGD:1563130 GO:GO:0005524
Gene3D:1.25.40.20 InterPro:IPR020683 SUPFAM:SSF48403
PROSITE:PS50297 GO:GO:0016787 Gene3D:1.25.40.10 CTD:9881
OrthoDB:EOG46Q6RM GeneTree:ENSGT00620000088104 IPI:IPI00563535
RefSeq:NP_001178728.1 UniGene:Rn.228178 Ensembl:ENSRNOT00000028633
GeneID:316022 KEGG:rno:316022 UCSC:RGD:1563130 NextBio:670315
Uniprot:D3ZSG2
Length = 2998
Score = 462 (167.7 bits), Expect = 1.1e-40, Sum P(4) = 1.1e-40
Identities = 160/524 (30%), Positives = 253/524 (48%)
Query: 597 FVLESRNTRNVERQ-EKGQLSDIFNLSQNFRTHVGVLNLAQSVIELLYRFFPHSVDILKP 655
F SRNT V++Q + I L QN+R+H G+LNLA V++LL +FP S D L
Sbjct: 1513 FHYASRNT--VDKQCAVRKPKRIHQLYQNYRSHSGILNLASGVVDLLQFYFPESFDRLPR 1570
Query: 656 ETSLIYGEPPVLLESGNDENAIIKIFGNSGDAGGNMVGFGAEQVILVRDDCVRKEISNYV 715
++ L G P LL+S + + I + GN + FGA QVILV ++ +++I +
Sbjct: 1571 DSGLFDGPKPTLLDSCSVSDLAILLRGNKRKT--QPIEFGAHQVILVANEMAKEKIPEEL 1628
Query: 716 GKQALVLTIVESKGLEFQDVLLYDFFGSSPLKNQWRVVYEYM-----KEQ--ALLDSTLP 768
G ALVLT+ E+KGLEF DVLLY+FF S +W+++ ++ +E+ LLD L
Sbjct: 1629 GL-ALVLTVYEAKGLEFDDVLLYNFFTDSEAYKEWKIISSFIPSSDSREENCPLLDVPLE 1687
Query: 769 ASFPS------FNEAKHNVLCPELKQLYVAITRTRQRLWIW-ENMEEFSKPMFDYWKKRL 821
S S N + +L ELKQLY AITR R LWI+ EN+E+ + P F Y+ +R
Sbjct: 1688 KSSSSQARSLMVNPEMYKLLNGELKQLYTAITRARVNLWIFDENLEKRA-PAFKYFIRRD 1746
Query: 822 LVQVRQLDDS--LAQAMQV-ASSPEEWKSRGIKLFYENNYEMATICFEKAKDTYWEGRSK 878
VQV + D++ +M V S+P+EW +G +++A C++K D + + +
Sbjct: 1747 FVQVVKTDENKDFDDSMFVKTSTPDEWIIQGDYYAKHQCWKVAAKCYQKG-DAFEKEKLA 1805
Query: 879 ATGLKAASDHIRSSNPLEANVILREAANIFEAIGKADSAAKCFYDLGEYERAGKIYEERC 938
A + + +P E + E A + + + KC E++ + ++ E R
Sbjct: 1806 LAHYTALNMKSKKFSPKEKELQYLELAKTYLECNEPKLSLKCLSYAKEFQLSAQLCE-RL 1864
Query: 939 GKPELEKAGECFFLAGQ-YKHAAEVYARGNFFSECLAVCSRGELFDIGLQYINYWKQHVD 997
GK + A F+ Q +K A + + F L + + ELF+ + +++ +
Sbjct: 1865 GK--IRDAAY-FYKRSQCFKDAFRCFEQIQEFDLALRMYCQEELFEEAAIAVEKYEEMLK 1921
Query: 998 TDVGLVRRSKEINKVEQDFLQSCALHYYQLNDKKSMMKFVKAFHSMDLMRNFLKSKSCFD 1057
V K Q +L++ A Y N K MM + D + FLKS+
Sbjct: 1922 NKTFPV--PKLSYSASQFYLEAAA-KYLSANKSKEMMAVLSKLDVEDQLV-FLKSRKRLA 1977
Query: 1058 ELLVLEEEAGNFMDAANIARLTGDILLTADLLQKAGNFKEACNL 1101
E L G +AA + + G LL A L +F+ +C L
Sbjct: 1978 EAAELLNREGRKEEAALLMKQHG-CLLEAARLTANKDFQASCLL 2020
Score = 111 (44.1 bits), Expect = 1.1e-40, Sum P(4) = 1.1e-40
Identities = 52/204 (25%), Positives = 91/204 (44%)
Query: 390 YIQVLKVWDILPLEDVQKLVTRLDNIFVKYTDEFINLCKEKCFEGNL-EVPKTWAVTSNI 448
Y +++++WDI+ D KL + I YT + ++K N +V + I
Sbjct: 966 YTEIIRIWDIVL--DHCKLSDSIMAICSAYTRGLSCVLRKKLKGINKGQVSANMKIQKRI 1023
Query: 449 VRFKNLADNESGSDMSGAASDCRSYVENSNVTDSLLLMKFYPLSSGIVSHLLSDRDGREL 508
R + D E+ + A D + S V +MKF+ S+ + ++L+D +
Sbjct: 1024 PRCY-VEDTEAEKSIEQA--DPEYFPPASAVETEYNIMKFHSFSTSMALNILNDMTAT-V 1079
Query: 509 DLPFEVTDEQLEMI-LFPRST---FILGRSGTGKTTILTMKLFQNEKHHRMAKEQFDG-- 562
+ PF V + + +I L P+ ++GRSGTGKTT +L++ + EQ
Sbjct: 1080 EYPFRVGELEYAVIDLNPKPLEPIILIGRSGTGKTTCCLYRLWKKFHVYWEKAEQAGSPL 1139
Query: 563 VNNSLTLHTSWEVE-AEEGLGGSE 585
++ + EVE +EG G E
Sbjct: 1140 LSKQILPKRRLEVEPGKEGPGQEE 1163
Score = 42 (19.8 bits), Expect = 1.1e-40, Sum P(4) = 1.1e-40
Identities = 12/32 (37%), Positives = 15/32 (46%)
Query: 1775 EITTLEVKAGDLPVKLKQFWNIFEALEFEDNG 1806
E+ T +VK L VK Q W L +D G
Sbjct: 2935 EVMTRQVKILTLSVKNAQEWLKKTELRLKDEG 2966
Score = 40 (19.1 bits), Expect = 6.6e-35, Sum P(3) = 6.6e-35
Identities = 14/44 (31%), Positives = 22/44 (50%)
Query: 139 NMVEVSVVMKILRNLYKAWVESKE-KLSIGIVSP-YSAQVIAIQ 180
N +VS MKI + + + +VE E + SI P Y A++
Sbjct: 1009 NKGQVSANMKIQKRIPRCYVEDTEAEKSIEQADPEYFPPASAVE 1052
Score = 38 (18.4 bits), Expect = 1.1e-40, Sum P(4) = 1.1e-40
Identities = 10/38 (26%), Positives = 22/38 (57%)
Query: 231 QRINVALTRARHCLWILGSERTLNHSES---VWESLLD 265
++I +A+ + + W G ++ L HS+ ++E+ LD
Sbjct: 888 KKIILAIQQLGNGEWTQGLQKRLKHSKGNIQLFEAKLD 925
>MGI|MGI:1341834 [details] [associations]
symbol:Trank1 "tetratricopeptide repeat and ankyrin repeat
containing 1" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] [GO:0016787
"hydrolase activity" evidence=IEA] InterPro:IPR002110
InterPro:IPR011990 InterPro:IPR013026 InterPro:IPR014017
Pfam:PF13361 PROSITE:PS50005 PROSITE:PS50088 PROSITE:PS50293
SMART:SM00248 MGI:MGI:1341834 GO:GO:0005524 Gene3D:1.25.40.20
InterPro:IPR020683 SUPFAM:SSF48403 PROSITE:PS50297 GO:GO:0016787
Gene3D:1.25.40.10 CTD:9881 HOVERGEN:HBG108082 OMA:EQHIHLE
OrthoDB:EOG46Q6RM EMBL:AC126677 EMBL:AC113495 EMBL:BC086653
EMBL:AK079552 EMBL:AK129119 IPI:IPI00848384 IPI:IPI00944738
RefSeq:NP_001158131.1 UniGene:Mm.270754 ProteinModelPortal:Q8BV79
SMR:Q8BV79 PhosphoSite:Q8BV79 PRIDE:Q8BV79
Ensembl:ENSMUST00000078626 GeneID:320429 KEGG:mmu:320429
UCSC:uc009rvt.2 UCSC:uc009rvu.1 eggNOG:NOG148247
GeneTree:ENSGT00620000088104 InParanoid:Q8BV79 NextBio:396696
Bgee:Q8BV79 Genevestigator:Q8BV79 Uniprot:Q8BV79
Length = 2999
Score = 457 (165.9 bits), Expect = 1.8e-40, Sum P(4) = 1.8e-40
Identities = 152/502 (30%), Positives = 242/502 (48%)
Query: 618 IFNLSQNFRTHVGVLNLAQSVIELLYRFFPHSVDILKPETSLIYGEPPVLLESGNDENAI 677
I L QN+R+H G+LNLA V++LL +FP S D L ++ L G P LL+S + +
Sbjct: 1535 IHQLYQNYRSHSGILNLASGVVDLLQFYFPESFDRLPRDSGLFDGPKPTLLDSCSVSDLA 1594
Query: 678 IKIFGNSGDAGGNMVGFGAEQVILVRDDCVRKEISNYVGKQALVLTIVESKGLEFQDVLL 737
I + GN + FGA QVILV ++ +++I +G ALVLT+ E+KGLEF DVLL
Sbjct: 1595 ILLRGNKRKT--QPIEFGAHQVILVANEKAKEKIPEELGL-ALVLTVYEAKGLEFDDVLL 1651
Query: 738 YDFFGSSPLKNQWRVVYEYM-----KEQA--LLDSTLPASFPS------FNEAKHNVLCP 784
Y+FF S +W+++ + +E+ L+D L S PS N + +L
Sbjct: 1652 YNFFTDSEAYKEWKIISSFTPSSDSREEKWPLVDVPLERSSPSQARSLMVNPEMYKLLNG 1711
Query: 785 ELKQLYVAITRTRQRLWIW-ENMEEFSKPMFDYWKKRLLVQVRQLDDS--LAQAMQV-AS 840
ELKQLY AITR R LWI+ EN+E+ + P F Y+ +R VQV + D++ +M V S
Sbjct: 1712 ELKQLYTAITRARVNLWIFDENLEKRA-PAFKYFIRRDFVQVVKTDENKDFDDSMFVKTS 1770
Query: 841 SPEEWKSRGIKLFYENNYEMATICFEKAKDTYWEGRSKATGLKAASDHIRSSNPLEANVI 900
+P EW +G +++A C++K D + + A + + +P E +
Sbjct: 1771 TPYEWIIQGDYYAKHQCWKVAAKCYQKG-DALEKEKLALAHYTALNMKSKKFSPKEKELQ 1829
Query: 901 LREAANIFEAIGKADSAAKCFYDLGEYERAGKIYEERCGKPELEKAGECFFLAGQ-YKHA 959
E A + + + KC E++ + ++ E R GK + A F+ Q ++ A
Sbjct: 1830 YLELAKTYLECNEPKLSLKCLSYAKEFQLSAQLCE-RLGK--IRDAAY-FYKRSQCFQDA 1885
Query: 960 AEVYARGNFFSECLAVCSRGELFDIGLQYINYWKQHVDTDVGLVRRSKEINKVEQDFLQS 1019
+ + F L + + ELF+ + +++ + + K Q +L++
Sbjct: 1886 FRCFEQIQEFDLALRMYCQEELFEEAAIAVEKYEEMLKNKTFPI--PKLSYSASQFYLEA 1943
Query: 1020 CALHYYQLNDKKSMMKFVKAFHSMDLMRNFLKSKSCFDELLVLEEEAGNFMDAANIARLT 1079
A Y N K MM + D + FLKS+ C E L G +AA + +
Sbjct: 1944 AA-KYLSANKSKEMMAVLSKLDVEDQLV-FLKSRKCLAEAAELLNREGRREEAALLMKQH 2001
Query: 1080 GDILLTADLLQKAGNFKEACNL 1101
G LL A L +F+ +C L
Sbjct: 2002 G-CLLEAARLTANKDFQASCLL 2022
Score = 110 (43.8 bits), Expect = 1.8e-40, Sum P(4) = 1.8e-40
Identities = 50/202 (24%), Positives = 87/202 (43%)
Query: 390 YIQVLKVWDILPLEDVQKLVTRLDNIFVKYTDEFINLCKEKCFEGNL-EVPKTWAVTSNI 448
Y +++++WDI+ D KL + I YT + ++K N +V + I
Sbjct: 967 YTEIIRIWDIVL--DHCKLSDSIMAICSAYTRGLSCVLRKKLKGINKGQVSANMKIQKRI 1024
Query: 449 VRFKNLADNESGSDMSGAASDCRSYVENSNVTDSLLLMKFYPLSSGIVSHLLSDRDGREL 508
R + D E+ + D + S V +MKF+ S+ + ++L+D +
Sbjct: 1025 PRCY-VEDTEAEKSLEQV--DPEYFPPASAVETEYSIMKFHSFSTNMALNILNDMTAT-V 1080
Query: 509 DLPFEVTDEQLEMI-LFPRST---FILGRSGTGKTTILTMKLFQNEKHHRMAKEQFDGVN 564
+ PF V + + +I L P+ ++GRSGTGKTT +L++ + EQ
Sbjct: 1081 EYPFRVGELEYAVIDLNPKPLEPIILIGRSGTGKTTCCLYRLWKKFHVYWEKAEQAGSPL 1140
Query: 565 NSLTLHTSWEVEAEEGLGGSER 586
S + +E E G G R
Sbjct: 1141 LSKQILPKRRLEVEPGKEGPGR 1162
Score = 42 (19.8 bits), Expect = 1.8e-40, Sum P(4) = 1.8e-40
Identities = 12/32 (37%), Positives = 15/32 (46%)
Query: 1775 EITTLEVKAGDLPVKLKQFWNIFEALEFEDNG 1806
E+ T +VK L VK Q W L +D G
Sbjct: 2936 EVMTQQVKILTLSVKNAQEWLKKTELRLKDEG 2967
Score = 42 (19.8 bits), Expect = 1.8e-40, Sum P(4) = 1.8e-40
Identities = 17/100 (17%), Positives = 47/100 (47%)
Query: 171 PYSAQVIAIQEKLGSKYEKIAGFAVK-VKS-IDGFQGGEEDIIIISTVRSNNTGSIGFAS 228
P ++Q++ + +LG + + ++ +++ + F +I S + + +
Sbjct: 827 PGASQLVPVGNRLGVASDNQENWTMQEIQACLQDFDNMTWEIECTSEMLKKLSSKVMTKV 886
Query: 229 TPQRINVALTRARHCLWILGSERTLNHSES---VWESLLD 265
++I +A+ + + W G ++ L HS+ ++E+ LD
Sbjct: 887 IKKKIILAIQQLGNGEWTQGLQKRLKHSKGNIQLFEAKLD 926
Score = 42 (19.8 bits), Expect = 1.4e-34, Sum P(3) = 1.4e-34
Identities = 14/44 (31%), Positives = 23/44 (52%)
Query: 139 NMVEVSVVMKILRNLYKAWVESKE-KLSIGIVSP-YSAQVIAIQ 180
N +VS MKI + + + +VE E + S+ V P Y A++
Sbjct: 1010 NKGQVSANMKIQKRIPRCYVEDTEAEKSLEQVDPEYFPPASAVE 1053
Score = 40 (19.1 bits), Expect = 2.9e-40, Sum P(4) = 2.9e-40
Identities = 8/24 (33%), Positives = 14/24 (58%)
Query: 1822 DVKKSIQLLSAALDGCFQKNSFHG 1845
D++ + +L ALD C+Q + G
Sbjct: 2034 DIEHTKVILREALDLCYQTSQLAG 2057
>TAIR|locus:2059088 [details] [associations]
symbol:AT2G19120 "AT2G19120" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0009506 "plasmodesma" evidence=IDA] GO:GO:0009506
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0004386 GO:GO:0004519
eggNOG:COG1112 EMBL:AC002392 KO:K10706 InterPro:IPR026852
PANTHER:PTHR10887:SF27 IPI:IPI00542366 PIR:T00533
RefSeq:NP_179502.1 UniGene:At.52824 ProteinModelPortal:O64476
SMR:O64476 PaxDb:O64476 PRIDE:O64476 EnsemblPlants:AT2G19120.1
GeneID:816429 KEGG:ath:AT2G19120 TAIR:At2g19120
HOGENOM:HOG000084788 InParanoid:O64476 OMA:DWAALIS PhylomeDB:O64476
ProtClustDB:CLSN2683158 ArrayExpress:O64476 Genevestigator:O64476
Uniprot:O64476
Length = 1090
Score = 470 (170.5 bits), Expect = 1.9e-40, P = 1.9e-40
Identities = 104/274 (37%), Positives = 156/274 (56%)
Query: 7 VVIDEAAQLKESESAIPLQLPCIQHAILVGDEVQLPAMVESSVSGEAYFGRSLFERLSYL 66
VVIDEAAQ E PL L + +LVGD QLPA V S +G + RSLFER
Sbjct: 778 VVIDEAAQASEVGVLPPLALGAAR-CVLVGDPQQLPATVISKAAGTLLYSRSLFERFQLA 836
Query: 67 GHPKHLLSMQYRMHPSISFFPNSYFYENKIRDAPTVRKRSYEKRFLPGPMYGPYSFINVF 126
G P LL++QYRMHP I FP+ YFY+ +++D+ ++ ++ + P+ PY F N+
Sbjct: 837 GCPTLLLTVQYRMHPQIRDFPSRYFYQGRLKDSESISSAP-DEIYYKDPVLRPYLFFNIS 895
Query: 127 GGREEFIEHSC--RNMVEVSVVMKILRNLYKAWVE-SKEKLSIGIVSPYSAQVIAIQEKL 183
GRE S N+ E + + +L K K+S+G+++PY Q+ ++ +
Sbjct: 896 HGRESHRGGSVSYENVDEARFCVGVYMHLQKTLKSLGAGKVSVGVITPYKLQLKCLKHEF 955
Query: 184 GSKYEKIAGFAVKVKSIDGFQGGEEDIIIISTVRSNNTGSIGFASTPQRINVALTRARHC 243
G+ + + + ++D FQG E D+II+S VR++ G +GF S +R+NVALTRAR
Sbjct: 956 GNALGQDELKEIYINTVDAFQGQERDVIIMSCVRASGHG-VGFVSDIRRMNVALTRARRA 1014
Query: 244 LWILGSERTLNHSESVWESLLDDAKARQCFFNID 277
LW++G+ L SE W +L+ DA+ R CF +D
Sbjct: 1015 LWVMGNASALMKSED-WAALISDARGRNCFMEMD 1047
>TAIR|locus:2130384 [details] [associations]
symbol:MAA3 "MAGATAMA 3" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0009553 "embryo sac development"
evidence=IMP] [GO:0009875 "pollen-pistil interaction" evidence=IMP]
[GO:0010183 "pollen tube guidance" evidence=IMP] PROSITE:PS51198
GO:GO:0005524 GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0004386 GO:GO:0009553 eggNOG:COG1112 InterPro:IPR014001
SMART:SM00487 EMBL:Z97339 GO:GO:0010183 EMBL:AL161542 EMBL:EU915246
IPI:IPI00522212 PIR:E71420 RefSeq:NP_193292.3 UniGene:At.33168
ProteinModelPortal:B6SFA4 SMR:B6SFA4 PaxDb:B6SFA4 PRIDE:B6SFA4
EnsemblPlants:AT4G15570.1 GeneID:827233 KEGG:ath:AT4G15570
GeneFarm:2417 TAIR:At4g15570 HOGENOM:HOG000030627 KO:K10706
OMA:TIMREFT PhylomeDB:B6SFA4 ProtClustDB:CLSN2680970
Genevestigator:B6SFA4 GO:GO:0009875 InterPro:IPR026852
PANTHER:PTHR10887:SF27 Uniprot:B6SFA4
Length = 818
Score = 460 (167.0 bits), Expect = 9.7e-40, P = 9.7e-40
Identities = 102/277 (36%), Positives = 157/277 (56%)
Query: 7 VVIDEAAQLKESESAIPLQLPCIQHAILVGDEVQLPAMVESSVSGEAYFGRSLFERLSYL 66
V+IDEAAQ E + IPL C Q LVGD QLPA V S+V+ ++ +G S+FERL
Sbjct: 487 VIIDEAAQAVEPATLIPLATRCKQ-VFLVGDPKQLPATVISTVAQDSGYGTSMFERLQKA 545
Query: 67 GHPKHLLSMQYRMHPSISFFPNSYFYENKIRDAPTVRKRSYEKRFLPGPMYGPYSFINVF 126
G+P +L QYRMHP I FP+ FYE + D + ++ + + +GP+ F ++
Sbjct: 546 GYPVKMLKTQYRMHPEIRSFPSKQFYEGALEDGSDIEAQT-TRDWHKYRCFGPFCFFDIH 604
Query: 127 GGREEFIEH-----SCRNMVEVSVVMKILRNLYKAWVESKEKLSIGIVSPYSAQVIAIQE 181
G+E +H S N+ EV V+ I L + E K + I+SPY+ QV ++
Sbjct: 605 EGKES--QHPGATGSRVNLDEVEFVLLIYHRLVTMYPELKSSSQLAIISPYNYQVKTFKD 662
Query: 182 KLGSKYEKIAGFAVKVKSIDGFQGGEEDIIIISTVRSNNTGSIGFASTPQRINVALTRAR 241
+ + A V + ++DGFQG E+D+ I S VR+N G IGF S +R+NV +TRA+
Sbjct: 663 RFKEMFGTEAEKVVDINTVDGFQGREKDVAIFSCVRANENGQIGFLSNSRRMNVGITRAK 722
Query: 242 HCLWILGSERTLNHSESVWESLLDDAKARQCFFNIDE 278
+ ++GS TL S+ +W++L++ A+ R F + +
Sbjct: 723 SSVLVVGSAATLK-SDPLWKNLIESAEQRNRLFKVSK 758
>CGD|CAL0003335 [details] [associations]
symbol:SEN1 species:5476 "Candida albicans" [GO:0035649 "Nrd1
complex" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0019904 "protein domain specific binding" evidence=IEA]
[GO:0016180 "snRNA processing" evidence=IEA] [GO:0031126 "snoRNA
3'-end processing" evidence=IEA] [GO:0006369 "termination of RNA
polymerase II transcription" evidence=IEA] [GO:0006378 "mRNA
polyadenylation" evidence=IEA] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0008033 "tRNA processing" evidence=IEA]
InterPro:IPR014016 InterPro:IPR024714 PROSITE:PS51198
CGD:CAL0003335 GO:GO:0005524 GO:GO:0005634 GO:GO:0008033
GO:GO:0004386 eggNOG:COG1112 EMBL:AACQ01000003 EMBL:AACQ01000004
GO:GO:0006364 GO:GO:0006369 GO:GO:0043144 GO:GO:0016180 KO:K10706
InterPro:IPR024481 PANTHER:PTHR10887:SF164 Pfam:PF12726
RefSeq:XP_723003.1 RefSeq:XP_723150.1 ProteinModelPortal:Q5ANG6
STRING:Q5ANG6 GeneID:3635255 GeneID:3635333 KEGG:cal:CaO19.13359
KEGG:cal:CaO19.5938 Uniprot:Q5ANG6
Length = 2018
Score = 454 (164.9 bits), Expect = 3.1e-38, P = 3.1e-38
Identities = 107/273 (39%), Positives = 159/273 (58%)
Query: 3 QLKFVVIDEAAQLKESESAIPLQLPCIQHAILVGDEVQLPAMVESSVSGEAYFGRSLFER 62
Q V+IDEA Q E + IPL+ C + I+VGD QLP V S + + +SLF R
Sbjct: 1534 QFDQVIIDEACQCLELSAIIPLRYGC-KKCIMVGDPNQLPPTVLSQAAASYNYEQSLFVR 1592
Query: 63 LSYLGHPK--HLLSMQYRMHPSISFFPNSYFYENKIRDAPTVRKRSYEKRFLPGPMYGPY 120
+ HP ++L +QYRMHP IS FP+S FY +K++D + + + + + P PY
Sbjct: 1593 MQK-NHPDSVYMLDVQYRMHPMISKFPSSEFYNSKLKDGDGMLELN-TRPWHKDPPLTPY 1650
Query: 121 SFINVFGGREEF-IEHSCRNMVEVSVVMKILRNLYKAWVESKEKLSIGIVSPYSAQVIAI 179
F ++ G E+ + S N E V +++ L + + K IGI+SPY Q+ I
Sbjct: 1651 RFFDILGKHEKNELTRSLFNTDEAIVALQLTDKLMQLLPQDKFSGKIGIISPYKEQIRKI 1710
Query: 180 QEKLGSKYEKIAGFAVKVKSIDGFQGGEEDIIIISTVRSNNTGSIGFASTPQRINVALTR 239
+E KY K + ++DGFQG E++III+S VR++ TG++GF S +R+NVALTR
Sbjct: 1711 KEVFVRKYGKPILDEIDFNTVDGFQGQEKEIIIMSCVRASATGNVGFLSDVRRMNVALTR 1770
Query: 240 ARHCLWILGSERTLNHSESVWESLLDDAKARQC 272
A+ LWILG++ +L+ +E VW+ LL DA R C
Sbjct: 1771 AKTTLWILGNKDSLSRNE-VWKKLLTDAGERNC 1802
>TAIR|locus:2126480 [details] [associations]
symbol:AT4G30100 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0009506 "plasmodesma"
evidence=IDA] GO:GO:0009506 EMBL:CP002687 EMBL:AL161576
GO:GO:0004519 eggNOG:COG1112 EMBL:AL078464 KO:K10706
InterPro:IPR026852 PANTHER:PTHR10887:SF27 HOGENOM:HOG000084788
ProtClustDB:CLSN2683158 IPI:IPI00535923 PIR:T08986
RefSeq:NP_194739.1 UniGene:At.31859 ProteinModelPortal:Q9SZW3
SMR:Q9SZW3 STRING:Q9SZW3 PaxDb:Q9SZW3 PRIDE:Q9SZW3
EnsemblPlants:AT4G30100.1 GeneID:829133 KEGG:ath:AT4G30100
TAIR:At4g30100 InParanoid:Q9SZW3 PhylomeDB:Q9SZW3
ArrayExpress:Q9SZW3 Genevestigator:Q9SZW3 Uniprot:Q9SZW3
Length = 1311
Score = 447 (162.4 bits), Expect = 8.5e-38, P = 8.5e-38
Identities = 103/279 (36%), Positives = 158/279 (56%)
Query: 7 VVIDEAAQLKESESAIPLQLPCIQHAILVGDEVQLPAMVESSVSGEAYFGRSLFERLSYL 66
VVIDEAAQ E PL L + +LVGD QLPA V S +G + RSLFER
Sbjct: 941 VVIDEAAQASEVGVLPPLALGAAR-CVLVGDPQQLPATVISKAAGTLLYSRSLFERFQLA 999
Query: 67 GHPKHLLSMQYRMHPSISFFPNSYFYENKIRDAPTVRKRSYEKRFLPGPMYGPYSFINVF 126
G P LL++QYRMHP I FP+ YFY+ ++ D+ +V + ++ + + PY F ++
Sbjct: 1000 GCPTLLLTVQYRMHPQIRDFPSRYFYQGRLTDSESV-STAPDEIYYKDSVLKPYLFFDIS 1058
Query: 127 GGREEFIEHSC--RNMVEVSVVMKILRNLYKAWVE-SKEKLSIGIVSPYSAQVIAIQEKL 183
GRE S N+ E + + +L + K+S+G+++PY Q+ ++ +
Sbjct: 1059 HGRESHRGGSVSYENIDEARFCVGVYLHLQRTLKSLGGGKVSVGVITPYKLQLKCLKIEF 1118
Query: 184 GSKYEKIAGFAVKVKSIDGFQGGEEDIIIISTVRSNNTGSIGFASTPQRINVALTRARHC 243
G+ + + + ++D FQG E D+II+S VR++N G +GF + +R+NVALTRA+
Sbjct: 1119 GNALSQDELQEIYINTVDAFQGQERDVIIMSCVRASNHG-VGFVADIRRMNVALTRAKRA 1177
Query: 244 LWILGSERTLNHSESVWESLLDDAKARQCFFNIDE-DKD 281
LW++G+ L E W +L+ DAKAR CF ++ KD
Sbjct: 1178 LWVMGNASALMKCED-WAALITDAKARNCFMEMESLPKD 1215
>UNIPROTKB|G4NIZ8 [details] [associations]
symbol:MGG_02784 "DNA-binding protein SMUBP-2"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR024714 GO:GO:0005524 GO:GO:0005634
GO:GO:0003677 GO:GO:0008033 GO:GO:0004386 EMBL:CM001237
GO:GO:0006364 GO:GO:0006369 GO:GO:0043144 GO:GO:0016180 KO:K10706
InterPro:IPR024481 PANTHER:PTHR10887:SF164 Pfam:PF12726
RefSeq:XP_003720957.1 EnsemblFungi:MGG_02784T0 GeneID:2682672
KEGG:mgr:MGG_02784 Uniprot:G4NIZ8
Length = 2037
Score = 439 (159.6 bits), Expect = 1.2e-36, P = 1.2e-36
Identities = 108/274 (39%), Positives = 155/274 (56%)
Query: 3 QLKF--VVIDEAAQLKESESAIPLQLPCIQHAILVGDEVQLPAMVESSVSGEAYFGRSLF 60
Q++F V+IDEAAQ E + IPL+ + ILVGD QLP V S + + +SLF
Sbjct: 1571 QVEFETVIIDEAAQCVELSALIPLKYGASK-CILVGDPKQLPPTVLSQSAARYGYDQSLF 1629
Query: 61 ERLSYLGHPK--HLLSMQYRMHPSISFFPNSYFYENKIRDAPTVRKRSYEKRFLPGPMYG 118
R+ HP HLL QYRMHP IS +P+ FYE + D + K ++ + P+ G
Sbjct: 1630 VRMQQ-NHPGKVHLLDCQYRMHPEISLYPSKEFYEGLLADGSDMAKLR-QQPWHDNPLLG 1687
Query: 119 PYSFINVFGGREEFIE-HSCRNMVEVSVVMKILRNLYKAWVESKE-KLSIGIVSPYSAQV 176
PY F +V G +E S N E++V ++I + S + K IGI++PY AQ+
Sbjct: 1688 PYRFFDVEGIQERGSRGQSLVNTNEINVAIQIYTKFQADYASSIDMKGKIGIITPYKAQL 1747
Query: 177 IAIQEKLGSKYEKIAGFAVKVKSIDGFQGGEEDIIIISTVRSNNTGSIGFASTPQRINVA 236
A+++K ++ + ++ + D FQG E +III S VR++ TG IGF + +R+NV
Sbjct: 1748 FALRQKFQERWGEGVLEDIEFNTTDAFQGRECEIIIFSCVRASPTGGIGFMTDIRRMNVG 1807
Query: 237 LTRARHCLWILGSERTLNHSESVWESLLDDAKAR 270
LTRAR LWILG R L E W L++D+KAR
Sbjct: 1808 LTRARSSLWILGDSRALRQGE-FWNKLIEDSKAR 1840
>POMBASE|SPBC29A10.10c [details] [associations]
symbol:SPBC29A10.10c "tRNA-splicing endonuclease
positive effector (predicted)" species:4896 "Schizosaccharomyces
pombe" [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISO] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO;IDA] [GO:0006364 "rRNA processing"
evidence=ISO] [GO:0006369 "termination of RNA polymerase II
transcription" evidence=IEA] [GO:0008033 "tRNA processing"
evidence=ISO] [GO:0016180 "snRNA processing" evidence=ISO]
[GO:0035649 "Nrd1 complex" evidence=ISO] [GO:0043144 "snoRNA
processing" evidence=ISO] InterPro:IPR024714 PomBase:SPBC29A10.10c
GO:GO:0005524 GO:GO:0005634 EMBL:CU329671 GO:GO:0008033
eggNOG:COG1112 GO:GO:0006364 GO:GO:0004004 GO:GO:0006369
GO:GO:0043144 GO:GO:0016180 KO:K10706 GO:GO:0035649
InterPro:IPR024481 PANTHER:PTHR10887:SF164 Pfam:PF12726
OrthoDB:EOG4MPMZ6 PIR:T40065 RefSeq:NP_596055.1
ProteinModelPortal:O94387 EnsemblFungi:SPBC29A10.10c.1
GeneID:2540523 KEGG:spo:SPBC29A10.10c NextBio:20801650
Uniprot:O94387
Length = 1944
Score = 438 (159.2 bits), Expect = 1.5e-36, P = 1.5e-36
Identities = 102/266 (38%), Positives = 156/266 (58%)
Query: 7 VVIDEAAQLKESESAIPLQLPCIQHAILVGDEVQLPAMVESSVSGEAYFGRSLFERLSYL 66
V+IDEAAQ E S IPL+ C + ++VGD QLP V S S + + +SL+ R+ +
Sbjct: 1513 VIIDEAAQAVELSSIIPLKYGC-ESCVMVGDPNQLPPTVLSKTSAKFGYSQSLYVRM-FK 1570
Query: 67 GHPKH--LLSMQYRMHPSISFFPNSYFYENKIRDAPTVRKRSYEKRFLPGPMYGPYSFIN 124
H + LLS+QYRM+P IS FP+ +FY +K+ D P + + + + P G Y F N
Sbjct: 1571 QHNESACLLSIQYRMNPEISRFPSKFFYNSKLLDGPNMSAVT-SRPWHEDPQLGIYRFFN 1629
Query: 125 VFGGREEFIEHSCRNMVEVSVVMKILRNLYKAWVESKEKLSIGIVSPYSAQVIAIQEKLG 184
V G S N+ E S ++ + L + ++ + IG+V+PY +QV ++ +
Sbjct: 1630 VHGTEAFSNSKSLYNVEEASFILLLYERLIQCYLNIDFEGKIGVVTPYRSQVQQLRSQFQ 1689
Query: 185 SKYEKIAGFAVKVKSIDGFQGGEEDIIIISTVRSNNTGSIGFASTPQRINVALTRARHCL 244
KY I + + ++DGFQG E+DIII S VRS+ +G IGF +R+NVALTRA+ L
Sbjct: 1690 RKYGSIIFKHLDIHTVDGFQGQEKDIIIFSCVRSSMSGGIGFLQDLRRLNVALTRAKSSL 1749
Query: 245 WILGSERTLNHSESVWESLLDDAKAR 270
+I+G+ + L E ++ SL++DAK R
Sbjct: 1750 YIVGNSKPLMQ-EDIFYSLIEDAKTR 1774
>ZFIN|ZDB-GENE-070402-1 [details] [associations]
symbol:setx "senataxin" species:7955 "Danio rerio"
[GO:0006302 "double-strand break repair" evidence=IEA]
InterPro:IPR026121 ZFIN:ZDB-GENE-070402-1 GO:GO:0006302
InterPro:IPR024481 Pfam:PF12726 GeneTree:ENSGT00580000081652
PANTHER:PTHR10887:SF15 EMBL:CU927918 IPI:IPI00481119
Ensembl:ENSDART00000082314 Ensembl:ENSDART00000149777
Uniprot:E7FBJ2
Length = 2368
Score = 432 (157.1 bits), Expect = 8.5e-36, P = 8.5e-36
Identities = 117/284 (41%), Positives = 159/284 (55%)
Query: 2 EQLKFVVIDEAAQLKESESAIPLQLPCIQHAILVGDEVQLPAMVESSVSGEAYFGRSLFE 61
E V+IDEA+Q KE+E+ IP+ C ILVGD QLP V S + E F +SL
Sbjct: 1953 EPFSCVIIDEASQAKETETLIPMLYRC-PSVILVGDPNQLPPTVVSQKAKEFGFDQSLMA 2011
Query: 62 RLSYLGHPKH-------LLSMQYRMHPSISFFPNSYFYENKIR-DAPTVRKRSYEKRFLP 113
RL HP + LLSMQYRMHP I FP+ Y Y + ++ D T +KR L
Sbjct: 2012 RLCKSLHPSNSKLPPILLLSMQYRMHPDICEFPSKYIYNSALKNDCETAQKRCS----LS 2067
Query: 114 GPMYGPYSFINVFGGREEFIEHSCRNMVEVSVVMKILRNLYKAWVESKEKLSIGIVSPYS 173
P + PY +V GRE S N EVS+V +L+ L K ++ + +G+++PY+
Sbjct: 2068 WP-FKPYKVFDVMDGRETKERDSFINHKEVSLVGLLLKLLCK-----EQAVRVGVITPYN 2121
Query: 174 AQVIAIQEKLG-SKYEKIAGFAVKVKSIDGFQGGEEDIIIISTVR-SNNTGSIGFASTPQ 231
AQ I + + S K V+V ++DGFQG E D II+S VR S+ GSIGF Q
Sbjct: 2122 AQKHRILDAIKTSGINK--QLQVEVDTVDGFQGREMDCIIVSCVRASSEMGSIGFVGNRQ 2179
Query: 232 RINVALTRARHCLWILGSERTLNHSESVWESLLDDAKARQCFFN 275
R+NV +TRA+ L+ILG RTL +S W +L++DA R+C N
Sbjct: 2180 RMNVTITRAKFSLFILGHLRTLRE-QSDWGALIEDAGRRECIIN 2222
>ASPGD|ASPL0000056713 [details] [associations]
symbol:AN0646 species:162425 "Emericella nidulans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0000184
"nuclear-transcribed mRNA catabolic process, nonsense-mediated
decay" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
InterPro:IPR003593 InterPro:IPR018999 Pfam:PF09416 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 EMBL:BN001308 GO:GO:0003677
GO:GO:0008270 GO:GO:0016567 GO:GO:0030466 GO:GO:0004386
GO:GO:0008298 InterPro:IPR014001 SMART:SM00487 GO:GO:0070478
HOGENOM:HOG000205990 OMA:MFYEGSL ProteinModelPortal:C8VS08
EnsemblFungi:CADANIAT00002030 Uniprot:C8VS08
Length = 1077
Score = 417 (151.9 bits), Expect = 9.6e-35, P = 9.6e-35
Identities = 108/277 (38%), Positives = 158/277 (57%)
Query: 1 MEQLKF--VVIDEAAQLKESESAIPLQLPCIQHAILVGDEVQLPAMVESSVSGEAYFGRS 58
+ +LKF V+IDE+ Q E E IPL L C Q +LVGD QL ++ + + +A +S
Sbjct: 578 LAKLKFRTVLIDESTQSAEPECMIPLVLGCKQ-VVLVGDHQQLGPVIMNKKAAKAGLNQS 636
Query: 59 LFERLSYLGHPKHLLSMQYRMHPSISFFPNSYFYENKIRDAPTVRKRSYEKRFLPGPMY- 117
LFERL LG L++QYRMHP +S FP++ FYE +++ T R + P P+
Sbjct: 637 LFERLVILGCSPIRLNVQYRMHPCLSEFPSNMFYEGSLQNGITSFDRLRREVDFPWPILD 696
Query: 118 GPYSFINVFGGREEFIEH-SCRNMVEVSVVMKILRNLYKAWVESKEKLSIGIVSPYSAQ- 175
P F + G E S N E + V KI+ +KA V+ K+ IGI++PY Q
Sbjct: 697 SPMMFWSNLGNEEISASGTSYLNRTEAANVEKIVTRFFKAGVQPKD---IGIITPYEGQR 753
Query: 176 --VIAIQEKLGSKYEKIAGFAVKVKSIDGFQGGEEDIIIISTVRSNNTGSIGFASTPQRI 233
+++ + G+ ++K ++V S+D FQG E+D II+S VRSN+ IGF S P+R+
Sbjct: 754 SYIVSSMQATGT-FKKEHYKEIEVASVDAFQGREKDFIILSCVRSNDHQGIGFLSDPRRL 812
Query: 234 NVALTRARHCLWILGSERTLNHSESVWESLLDDAKAR 270
NVALTRA++ L ILG+ + L+ +W LL K R
Sbjct: 813 NVALTRAKYGLVILGNPKVLS-KHPLWNCLLQHFKER 848
>CGD|CAL0003666 [details] [associations]
symbol:NAM7 species:5476 "Candida albicans" [GO:0000184
"nuclear-transcribed mRNA catabolic process, nonsense-mediated
decay" evidence=ISS] [GO:0005829 "cytosol" evidence=IEA]
[GO:0030466 "chromatin silencing at silent mating-type cassette"
evidence=IEA] [GO:0070478 "nuclear-transcribed mRNA catabolic
process, 3'-5' exonucleolytic nonsense-mediated decay"
evidence=IEA] [GO:0008298 "intracellular mRNA localization"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
InterPro:IPR003593 InterPro:IPR018999 Pfam:PF09416 SMART:SM00382
CGD:CAL0003666 GO:GO:0005524 GO:GO:0005737 GO:GO:0000184
GO:GO:0003677 GO:GO:0008270 GO:GO:0004386 eggNOG:COG1112
InterPro:IPR014001 SMART:SM00487 EMBL:AACQ01000063
EMBL:AACQ01000062 KO:K14326 RefSeq:XP_716778.1 RefSeq:XP_716838.1
ProteinModelPortal:Q5A507 SMR:Q5A507 STRING:Q5A507 GeneID:3641489
GeneID:3641540 KEGG:cal:CaO19.8554 KEGG:cal:CaO19.939
Uniprot:Q5A507
Length = 1019
Score = 414 (150.8 bits), Expect = 1.8e-34, P = 1.8e-34
Identities = 105/279 (37%), Positives = 160/279 (57%)
Query: 3 QLKFVVIDEAAQLKESESAIPLQLPCIQHAILVGDEVQLPAMVESSVSGEAYFGRSLFER 62
+ K V+IDE+ Q E E IP+ + + ILVGD QL ++ + +A +SLFER
Sbjct: 598 RFKTVLIDESTQASEPEVLIPI-VKGAKQVILVGDHQQLGPVILDKKAADAGLKQSLFER 656
Query: 63 LSYLGHPKHLLSMQYRMHPSISFFPNSYFYENKIRDAPTVRKRSYEKRFLPGPMYG-PYS 121
L +LGH L +QYRMHP +S FP++ FYE +++ T R E+ P P+ P
Sbjct: 657 LVFLGHVPIRLEVQYRMHPCLSEFPSNMFYEGSLQNGVTSDDRLIEESTFPWPVIDTPMM 716
Query: 122 FINVFGGREEFIE--HSCRNMVEVSVVMKILRNLYKAWVESKEKLSIGIVSPYSAQ---- 175
F +G REE +S N VE V KI+ L+K ++ ++ IG+++PY Q
Sbjct: 717 FWANYG-REELSASGNSYLNRVEAMNVEKIITKLFKDGIKPEQ---IGVITPYEGQRAYL 772
Query: 176 --VIAIQEKLGSKYEKIAGFAVKVKSIDGFQGGEEDIIIISTVRSNNTGSIGFASTPQRI 233
+++ L K ++ V++ S+D FQG E+D II+S VR+N++ SIGF S P+R+
Sbjct: 773 VQFMSVNSTLLDKRDQYLN--VEITSVDAFQGREKDFIILSCVRANDSQSIGFLSDPRRL 830
Query: 234 NVALTRARHCLWILGSERTLNHSESVWESLLDDAKARQC 272
NVALTRA++ L ILG+ R+L + +W LL + + C
Sbjct: 831 NVALTRAKYGLVILGNPRSLCRNR-LWNHLLIHFREKGC 868
>UNIPROTKB|Q5A507 [details] [associations]
symbol:NAM7 "Putative uncharacterized protein NAM7"
species:237561 "Candida albicans SC5314" [GO:0000184
"nuclear-transcribed mRNA catabolic process, nonsense-mediated
decay" evidence=ISS] InterPro:IPR003593 InterPro:IPR018999
Pfam:PF09416 SMART:SM00382 CGD:CAL0003666 GO:GO:0005524
GO:GO:0005737 GO:GO:0000184 GO:GO:0003677 GO:GO:0008270
GO:GO:0004386 eggNOG:COG1112 InterPro:IPR014001 SMART:SM00487
EMBL:AACQ01000063 EMBL:AACQ01000062 KO:K14326 RefSeq:XP_716778.1
RefSeq:XP_716838.1 ProteinModelPortal:Q5A507 SMR:Q5A507
STRING:Q5A507 GeneID:3641489 GeneID:3641540 KEGG:cal:CaO19.8554
KEGG:cal:CaO19.939 Uniprot:Q5A507
Length = 1019
Score = 414 (150.8 bits), Expect = 1.8e-34, P = 1.8e-34
Identities = 105/279 (37%), Positives = 160/279 (57%)
Query: 3 QLKFVVIDEAAQLKESESAIPLQLPCIQHAILVGDEVQLPAMVESSVSGEAYFGRSLFER 62
+ K V+IDE+ Q E E IP+ + + ILVGD QL ++ + +A +SLFER
Sbjct: 598 RFKTVLIDESTQASEPEVLIPI-VKGAKQVILVGDHQQLGPVILDKKAADAGLKQSLFER 656
Query: 63 LSYLGHPKHLLSMQYRMHPSISFFPNSYFYENKIRDAPTVRKRSYEKRFLPGPMYG-PYS 121
L +LGH L +QYRMHP +S FP++ FYE +++ T R E+ P P+ P
Sbjct: 657 LVFLGHVPIRLEVQYRMHPCLSEFPSNMFYEGSLQNGVTSDDRLIEESTFPWPVIDTPMM 716
Query: 122 FINVFGGREEFIE--HSCRNMVEVSVVMKILRNLYKAWVESKEKLSIGIVSPYSAQ---- 175
F +G REE +S N VE V KI+ L+K ++ ++ IG+++PY Q
Sbjct: 717 FWANYG-REELSASGNSYLNRVEAMNVEKIITKLFKDGIKPEQ---IGVITPYEGQRAYL 772
Query: 176 --VIAIQEKLGSKYEKIAGFAVKVKSIDGFQGGEEDIIIISTVRSNNTGSIGFASTPQRI 233
+++ L K ++ V++ S+D FQG E+D II+S VR+N++ SIGF S P+R+
Sbjct: 773 VQFMSVNSTLLDKRDQYLN--VEITSVDAFQGREKDFIILSCVRANDSQSIGFLSDPRRL 830
Query: 234 NVALTRARHCLWILGSERTLNHSESVWESLLDDAKARQC 272
NVALTRA++ L ILG+ R+L + +W LL + + C
Sbjct: 831 NVALTRAKYGLVILGNPRSLCRNR-LWNHLLIHFREKGC 868
>SGD|S000004422 [details] [associations]
symbol:SEN1 "Presumed helicase and subunit of the Nrd1
complex (Nrd1p-Nab3p-Sen1p)" species:4932 "Saccharomyces
cerevisiae" [GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0043144
"snoRNA processing" evidence=IEA] [GO:0008033 "tRNA processing"
evidence=IEA;IMP] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=IEA;IMP] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0019904 "protein
domain specific binding" evidence=IMP;IDA] [GO:0031126 "snoRNA
3'-end processing" evidence=IMP] [GO:0006378 "mRNA polyadenylation"
evidence=IMP] [GO:0006369 "termination of RNA polymerase II
transcription" evidence=IEA;IMP] [GO:0016180 "snRNA processing"
evidence=IEA;IMP] [GO:0008186 "RNA-dependent ATPase activity"
evidence=ISS] [GO:0043141 "ATP-dependent 5'-3' DNA helicase
activity" evidence=ISS] [GO:0032575 "ATP-dependent 5'-3' RNA
helicase activity" evidence=ISS] [GO:0008094 "DNA-dependent ATPase
activity" evidence=ISS] [GO:0035649 "Nrd1 complex" evidence=IDA]
[GO:0005657 "replication fork" evidence=IDA] [GO:0045005
"maintenance of fidelity involved in DNA-dependent DNA replication"
evidence=IMP] [GO:0031124 "mRNA 3'-end processing" evidence=IMP]
InterPro:IPR024714 SGD:S000004422 GO:GO:0005524 GO:GO:0005634
GO:GO:0019904 GO:GO:0006378 EMBL:BK006945 GO:GO:0008033
eggNOG:COG1112 EMBL:U20939 EMBL:U21094 GO:GO:0006364 GO:GO:0006369
GO:GO:0031126 GO:GO:0043141 KO:K00088 RefSeq:NP_013536.3
GeneID:851152 KEGG:sce:YLR432W GO:GO:0016180 KO:K10706
RefSeq:NP_013534.3 GeneID:851150 KEGG:sce:YLR430W GO:GO:0035649
GO:GO:0032575 InterPro:IPR024481 PANTHER:PTHR10887:SF164
Pfam:PF12726 EMBL:M74589 PIR:S53416 ProteinModelPortal:Q00416
SMR:Q00416 DIP:DIP-881N IntAct:Q00416 MINT:MINT-427565
STRING:Q00416 PaxDb:Q00416 PeptideAtlas:Q00416 EnsemblFungi:YLR430W
CYGD:YLR430w GeneTree:ENSGT00580000081652 HOGENOM:HOG000246755
OMA:SAIIPLR OrthoDB:EOG4MPMZ6 NextBio:967924 Genevestigator:Q00416
GermOnline:YLR430W Uniprot:Q00416
Length = 2231
Score = 443 (161.0 bits), Expect = 1.9e-34, Sum P(2) = 1.9e-34
Identities = 106/279 (37%), Positives = 169/279 (60%)
Query: 4 LKF--VVIDEAAQLKESESAIPLQLPCIQHAILVGDEVQLPAMVESSVSGEAYFGRSLFE 61
+KF V+IDEA Q E S IPL+ + I+VGD QLP V S + + +SLF
Sbjct: 1582 IKFDTVIIDEACQCTELSSIIPLRYGG-KRCIMVGDPNQLPPTVLSGAASNFKYNQSLFV 1640
Query: 62 RLSYLGHPKHLLSMQYRMHPSISFFPNSYFYENKIRDAP---TVRKRSYEKRFLPGPMYG 118
R+ P +LL +QYRMHPSIS FP+S FY+ +++D P + KR + + P+
Sbjct: 1641 RMEKNSSP-YLLDVQYRMHPSISKFPSSEFYQGRLKDGPGMDILNKRPWHQL---EPL-A 1695
Query: 119 PYSFINVFGGREEFIEH--SCRNMVEVSVVMKILRNLYKAWVESKEKLS--IGIVSPYSA 174
PY F ++ GR+E S NM E+ V ++++ L++ + ++K + IGI+SPY
Sbjct: 1696 PYKFFDIISGRQEQNAKTMSYTNMEEIRVAIELVDYLFRKF-DNKIDFTGKIGIISPYRE 1754
Query: 175 QVIAIQEKLGSKYEKIAGFAVKVKSIDGFQGGEEDIIIISTVRSNNT-GSIGFASTPQRI 233
Q+ ++++ + + ++ +IDGFQG E++II+IS VR+++T S+GF +R+
Sbjct: 1755 QMQKMRKEFARYFGGMINKSIDFNTIDGFQGQEKEIILISCVRADDTKSSVGFLKDFRRM 1814
Query: 234 NVALTRARHCLWILGSERTLNHSESVWESLLDDAKARQC 272
NVALTRA+ +W+LG +R+L S+ +W L++DAK R C
Sbjct: 1815 NVALTRAKTSIWVLGHQRSLAKSK-LWRDLIEDAKDRSC 1852
Score = 37 (18.1 bits), Expect = 1.9e-34, Sum P(2) = 1.9e-34
Identities = 11/54 (20%), Positives = 21/54 (38%)
Query: 1914 KSLETGVASAGNVNVENTDSNADECSGSHEGKIIPTSATSASEAQGSSQKPVSN 1967
K + G+ ++ +N D+ I S+ SEA G + + S+
Sbjct: 2029 KEKQLGLKETRTISPPEISNNEDDDDEDDYTPSISDSSLMKSEANGRNNRVASH 2082
>UNIPROTKB|G4ND47 [details] [associations]
symbol:MGG_00976 "Regulator-nonsense transcripts 1"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR018999 Pfam:PF09416
GO:GO:0005524 GO:GO:0005737 EMBL:CM001235 GO:GO:0003677
GO:GO:0008270 GO:GO:0016567 GO:GO:0030466 GO:GO:0004386
GO:GO:0008298 InterPro:IPR014001 SMART:SM00487 GO:GO:0070478
KO:K14326 RefSeq:XP_003717973.1 ProteinModelPortal:G4ND47
SMR:G4ND47 EnsemblFungi:MGG_00976T0 GeneID:2674784
KEGG:mgr:MGG_00976 Uniprot:G4ND47
Length = 1105
Score = 426 (155.0 bits), Expect = 1.0e-33, Sum P(2) = 1.0e-33
Identities = 106/279 (37%), Positives = 163/279 (58%)
Query: 1 MEQLKF--VVIDEAAQLKESESAIPLQLPCIQHAILVGDEVQLPAMVESSVSGEAYFGRS 58
+ +LKF V+IDE+ Q E E IPL L C Q +LVGD QL ++ + + +A +S
Sbjct: 606 LAKLKFRNVLIDESTQSAEPECMIPLVLGCKQ-VVLVGDHKQLGPVIMNKKAAKAGLNQS 664
Query: 59 LFERLSYLGHPKHLLSMQYRMHPSISFFPNSYFYENKIRDAPTVRKRSYEKRFLPGPMYG 118
LFERL LG L++QYRMHP +S FP++ FYE +++ T+++R P P+
Sbjct: 665 LFERLVKLGLTPIRLNVQYRMHPCLSEFPSNMFYEGSLQNGVTIQQRLRRDVDFPWPVAD 724
Query: 119 -PYSFINVFGGREEFIEH-SCRNMVEVSVVMKILRNLYKAWVESKEKLSIGIVSPYSAQ- 175
P F + G E S N E S V K++ +KA V+ + IG+V+PY Q
Sbjct: 725 MPMMFWSNLGNEEISASGTSYLNRTEASNVEKLVTRFFKAGVKPGD---IGVVTPYEGQR 781
Query: 176 --VIAIQEKLGSKYEKIAGFAVKVKSIDGFQGGEEDIIIISTVRSNNTGSIGFASTPQRI 233
+++ + G+ ++K + V+V S+D FQG E+D I++S VRSN + IGF S P+R+
Sbjct: 782 SYIVSTMQNTGT-FKKESYKEVEVASVDAFQGREKDFIVLSCVRSNESQGIGFLSDPRRL 840
Query: 234 NVALTRARHCLWILGSERTLNHSESVWESLLDDAKARQC 272
NVALTRA++ + I+G+ + L+ E +W LL + R+C
Sbjct: 841 NVALTRAKYGVVIIGNPKVLSKHE-LWHHLLIHFRDRKC 878
Score = 38 (18.4 bits), Expect = 1.0e-33, Sum P(2) = 1.0e-33
Identities = 6/12 (50%), Positives = 9/12 (75%)
Query: 1434 GLKGIPSYGQIG 1445
GL G+P +G+ G
Sbjct: 982 GLPGVPGHGRSG 993
>DICTYBASE|DDB_G0289529 [details] [associations]
symbol:DDB_G0289529 species:44689 "Dictyostelium
discoideum" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0016779 "nucleotidyltransferase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR002934
InterPro:IPR003593 Pfam:PF01909 SMART:SM00382
dictyBase:DDB_G0289529 GO:GO:0005524 EMBL:AAFI02000141
GO:GO:0017111 eggNOG:COG1112 GO:GO:0016779 RefSeq:XP_636183.1
ProteinModelPortal:Q54HF4 EnsemblProtists:DDB0219440 GeneID:8627170
KEGG:ddi:DDB_G0289529 InParanoid:Q54HF4 ProtClustDB:CLSZ2429765
Uniprot:Q54HF4
Length = 1677
Score = 409 (149.0 bits), Expect = 1.5e-33, P = 1.5e-33
Identities = 101/260 (38%), Positives = 146/260 (56%)
Query: 7 VVIDEAAQLKESESAIPLQLPCIQHAILVGDEVQLPAMVESSVSGEAYFGRSLFERLSYL 66
V+IDE+ Q E S IPL L ++ ILVGD VQLP + S + SLFERL+
Sbjct: 1331 VLIDESTQSSEPTSIIPLSLGSVKKLILVGDPVQLPPTIFSKQGADCGLKISLFERLAK- 1389
Query: 67 GHPKHLLSMQYRMHPSISFFPNSYFYENKIRDAPTVRKRSYEK-RFLPGPMYGPYSFINV 125
L+ QYRMHP S F + FY ++D V SY +F P +GP F ++
Sbjct: 1390 SIDVQFLNTQYRMHPVTSKFISEEFYNGTLKDGENVSIDSYNNCKFHFDPSFGPMKFFDL 1449
Query: 126 FGGREEFIEHSCRNMVEVSVVMKILRNLYKAWVESKEKLSIGIVSPYSAQVIAIQEKLG- 184
++ I+ S N E+ V +++ L + + E K KLS GI++PY Q+ I+E+L
Sbjct: 1450 PKSNQKVIKKSIMNQDEIDKVFTLIKELIEKYPECK-KLSFGIITPYKLQMNQIKEQLNR 1508
Query: 185 SKYEKIAGFAVKVKSIDGFQGGEEDIIIISTVRSNNTGSIGFASTPQRINVALTRARHCL 244
S++ + + V +IDG QG E+DIII+S VRS IGF S +RINVALTRA+ L
Sbjct: 1509 SEHHNLN---ISVSTIDGVQGSEKDIIIMSCVRSIEKFGIGFLSDRRRINVALTRAKLGL 1565
Query: 245 WILGSERTLNHSESVWESLL 264
+++G+ + L ++ WE L
Sbjct: 1566 YVIGTYKVLA-KDNTWEKFL 1584
>DICTYBASE|DDB_G0268924 [details] [associations]
symbol:DDB_G0268924 "Helicase SEN1" species:44689
"Dictyostelium discoideum" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 SMART:SM00382 dictyBase:DDB_G0268924
GO:GO:0005524 EMBL:AAFI02000004 GO:GO:0017111 eggNOG:COG1112
ProtClustDB:CLSZ2429765 RefSeq:XP_646844.2
ProteinModelPortal:Q55F26 EnsemblProtists:DDB0202279 GeneID:8616527
KEGG:ddi:DDB_G0268924 InParanoid:Q55F26 Uniprot:Q55F26
Length = 1772
Score = 426 (155.0 bits), Expect = 5.0e-33, Sum P(2) = 5.0e-33
Identities = 100/255 (39%), Positives = 152/255 (59%)
Query: 7 VVIDEAAQLKESESAIPLQLPCIQHAILVGDEVQLPAMVESSVSGEAYFGRSLFERLSYL 66
+++DE+ Q E S IPL + I+ ILVGD +QLP + S+ S E SLFERLS +
Sbjct: 1382 ILVDESTQSTEPSSIIPLCIGNIEKLILVGDPLQLPPTIFSTESAENGLNISLFERLSKV 1441
Query: 67 GHPKHLLSMQYRMHPSISFFPNSYFYENKIRDAPTVRKRSYEKR-FLPGPMYGPYSFINV 125
P +L +QYRMHP+IS FP++ FY +++ D V+ Y + F YGP F +V
Sbjct: 1442 -LPVEMLHVQYRMHPTISRFPSNQFYRDRLLDGDNVKSLVYNQHNFHSDIKYGPIRFYDV 1500
Query: 126 FGGREEFIEHSCRNMVEVSVVMKILRNLYKAWVESKEKLSIGIVSPYSAQVIAIQEKLGS 185
+EE + S +N +E+++V +++ L + + E K K S GI++PY Q I+E+
Sbjct: 1501 IDSKEESGKRSLKNKLEITMVFTLIKKLVQDYPECK-KFSFGIITPYKLQKSEIKEQ-HK 1558
Query: 186 KYEKIAGFAVKVKSIDGFQGGEEDIIIISTVRSNNTGSIGFASTPQRINVALTRARHCLW 245
++ ++ +IDGFQG E+DIII+S VRS IGF S +RINVALTRA+ L+
Sbjct: 1559 QFNYPLN--IETSTIDGFQGSEKDIIILSCVRSER---IGFLSDRRRINVALTRAKFGLF 1613
Query: 246 ILGSERTLNHSESVW 260
++G+ + L + W
Sbjct: 1614 VIGNSKLLK-KDRTW 1627
Score = 38 (18.4 bits), Expect = 5.0e-33, Sum P(2) = 5.0e-33
Identities = 10/38 (26%), Positives = 21/38 (55%)
Query: 1134 AKSLAKSNS-NQFYEFVCTEASILSNDESDLFIMNQQL 1170
+K L K + F ++V + S++S D + ++ QQ+
Sbjct: 1618 SKLLKKDRTWGPFCQYVHSINSMVSIDSKGISVLEQQI 1655
>DICTYBASE|DDB_G0285243 [details] [associations]
symbol:DDB_G0285243 "putative splicing endonuclease"
species:44689 "Dictyostelium discoideum" [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
dictyBase:DDB_G0285243 EMBL:AAFI02000076 KO:K10706
InterPro:IPR024481 Pfam:PF12726 RefSeq:XP_002649136.1
ProteinModelPortal:C7G036 EnsemblProtists:DDB0252844 GeneID:8625002
KEGG:ddi:DDB_G0285243 OMA:DSINMIF Uniprot:C7G036
Length = 2069
Score = 403 (146.9 bits), Expect = 8.9e-33, P = 8.9e-33
Identities = 100/284 (35%), Positives = 157/284 (55%)
Query: 7 VVIDEAAQLKESESAIPLQLPCIQHAILVGDEVQLPAMVESSVSGEAYFGRSLFERLSYL 66
V++DEAAQ E + IPL+ ++ ILVGD QLP S V+ + + SLF+RL
Sbjct: 1610 VIVDEAAQAVELSTLIPLRHD-VKKCILVGDPQQLPPTTISKVATKFQYEISLFQRLMNC 1668
Query: 67 GHPKHLLSMQYRMHPSISFFPNSYFYENKIRDAPTVRKRSYEKRFLPGPMYGPYSFINVF 126
G +L QYRMHP IS FP+ FY ++ D VR+ + +GP F ++F
Sbjct: 1669 GMAPTVLKTQYRMHPMISKFPSKIFYRGELEDGKNVREYKQDYYNDSASRFGPLVFYDLF 1728
Query: 127 GGREEFIEH--SCRNMVEVSVVMKILRNLYKAWVESKEKLSIGIVSPYSAQVIAIQEKLG 184
E S RN EV + I+ L + +K+ L IG+++PY +Q + +
Sbjct: 1729 DKHGEVRSSFFSLRNPTEVKLAKLIVDQLISNYPNTKD-LEIGVITPYKSQSVDL----- 1782
Query: 185 SKYEKIAGFA-VKVKSIDGFQGGEEDIIIISTVRSNNTGSIGFASTPQRINVALTRARHC 243
+ G+ V+V +IDGFQG E+D +I S+VR+++ SIGF S +R+NV LTRA++
Sbjct: 1783 --FNAFKGYQNVEVSTIDGFQGKEKDFVIFSSVRAHSGHSIGFLSDIRRMNVGLTRAKYS 1840
Query: 244 LWILGSERTLNHSESVWESLLDDAK-ARQCFFNIDEDKDLAKAI 286
+ ILG+ L++++ W +L++D + C+F I K + K +
Sbjct: 1841 MVILGNSSLLSNNDD-WGNLVNDLRQTNNCYFPISS-KSIDKGV 1882
>DICTYBASE|DDB_G0268662 [details] [associations]
symbol:DDB_G0268662 "DNA2/NAM7 helicase family
protein" species:44689 "Dictyostelium discoideum" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
InterPro:IPR003593 SMART:SM00382 dictyBase:DDB_G0268662
Pfam:PF03828 GO:GO:0005524 EMBL:AAFI02000004 GO:GO:0004386
eggNOG:COG1112 InterPro:IPR002058 ProtClustDB:CLSZ2429765
RefSeq:XP_646848.1 ProteinModelPortal:Q55F22
EnsemblProtists:DDB0304624 GeneID:8616531 KEGG:ddi:DDB_G0268662
InParanoid:Q55F22 Uniprot:Q55F22
Length = 2523
Score = 420 (152.9 bits), Expect = 1.3e-32, Sum P(2) = 1.3e-32
Identities = 100/255 (39%), Positives = 152/255 (59%)
Query: 7 VVIDEAAQLKESESAIPLQLPCIQHAILVGDEVQLPAMVESSVSGEAYFGRSLFERLSYL 66
V++DE+ Q E S IPL + I+ ILVGD +QLP + SS S + SLFERLS +
Sbjct: 1733 VLVDESTQSSEPASLIPLCIGNIEKLILVGDPLQLPPTIFSSESAKNGLNISLFERLSKV 1792
Query: 67 GHPKHLLSMQYRMHPSISFFPNSYFYENKIRDAPTVRKRSYEKR-FLPGPMYGPYSFINV 125
P +L+ QYRMHP+IS FP++ FY++++ D V+ Y + F YGP F +V
Sbjct: 1793 -LPVEMLNTQYRMHPTISRFPSNQFYKDRLLDGDNVKSLVYNQHNFHSDIKYGPIRFYDV 1851
Query: 126 FGGREEFIEHSCRNMVEVSVVMKILRNLYKAWVESKEKLSIGIVSPYSAQVIAIQEKLGS 185
+EE + S +N +E+++V +++ L + + E K K S GI++PY Q I+E+
Sbjct: 1852 IDSKEESGKRSLKNKLEITMVFTLIKKLVQDYPECK-KFSFGIITPYKLQKSEIKEQ-HK 1909
Query: 186 KYEKIAGFAVKVKSIDGFQGGEEDIIIISTVRSNNTGSIGFASTPQRINVALTRARHCLW 245
++ ++ +IDG QG E+DIII+S VRS IGF S +RINVALTRA+ L+
Sbjct: 1910 QFNYPLN--IETSTIDGVQGSEKDIIILSCVRSER---IGFLSDRRRINVALTRAKFGLF 1964
Query: 246 ILGSERTLNHSESVW 260
++G+ + L + W
Sbjct: 1965 VIGNSKLLK-KDRTW 1978
Score = 44 (20.5 bits), Expect = 1.3e-32, Sum P(2) = 1.3e-32
Identities = 13/42 (30%), Positives = 21/42 (50%)
Query: 1134 AKSLAKSNSNQFYEFVCTEASILSNDES--DLFIMNQQLNAS 1173
A S+ K+ EF+ E S+ S + DLF N L+++
Sbjct: 2478 ASSIKKTYQRVLMEFIMMEYSLRSTKSTINDLFKENLSLSSN 2519
Score = 44 (20.5 bits), Expect = 9.7e-31, Sum P(3) = 9.7e-31
Identities = 24/90 (26%), Positives = 36/90 (40%)
Query: 1313 QLVSAGRSYWSSELLSVGMKVLGNLEALHKQLSKN-SPTVFSQVLHLTCIYEVAKFLLSS 1371
+L+S G + S L L L L N S T HL +Y+
Sbjct: 2206 KLISEGFATASINLYG---SFLSGLSLNDSDLDINFSSTQKEDTTHLKQVYKYLNRSQLY 2262
Query: 1372 KYLNRRYYDEKI-LQKFVELSTEHFFDFIF 1400
K + +R D K+ + +F E+S+ FD F
Sbjct: 2263 KLIEKRT-DAKVPIIRFKEISSGVHFDMCF 2291
Score = 38 (18.4 bits), Expect = 9.7e-31, Sum P(3) = 9.7e-31
Identities = 9/23 (39%), Positives = 15/23 (65%)
Query: 1121 LKQFTEKKELFEKAKSLAKSNSN 1143
LK+ E+ E ++SL+ S+SN
Sbjct: 2155 LKKVLNNLEIQEISQSLSSSSSN 2177
Score = 38 (18.4 bits), Expect = 9.7e-31, Sum P(3) = 9.7e-31
Identities = 10/38 (26%), Positives = 21/38 (55%)
Query: 1134 AKSLAKSNS-NQFYEFVCTEASILSNDESDLFIMNQQL 1170
+K L K + F ++V + S++S D + ++ QQ+
Sbjct: 1969 SKLLKKDRTWGPFCQYVHSINSMVSIDSKGISVLEQQI 2006
>SGD|S000004685 [details] [associations]
symbol:NAM7 "ATP-dependent RNA helicase of the SFI
superfamily" species:4932 "Saccharomyces cerevisiae" [GO:0005737
"cytoplasm" evidence=IEA;IDA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0000956 "nuclear-transcribed mRNA catabolic process"
evidence=IMP] [GO:0070478 "nuclear-transcribed mRNA catabolic
process, 3'-5' exonucleolytic nonsense-mediated decay"
evidence=IGI;IMP] [GO:0008298 "intracellular mRNA localization"
evidence=IMP] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=TAS] [GO:0016567 "protein ubiquitination"
evidence=IMP;IDA;IPI] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0005844 "polysome" evidence=TAS] [GO:0003676 "nucleic acid
binding" evidence=TAS] [GO:0000184 "nuclear-transcribed mRNA
catabolic process, nonsense-mediated decay" evidence=IEA;TAS]
[GO:0006449 "regulation of translational termination" evidence=TAS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0030466 "chromatin
silencing at silent mating-type cassette" evidence=IGI] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0046872 "metal
ion binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0006452 "translational frameshifting" evidence=IMP] [GO:0008186
"RNA-dependent ATPase activity" evidence=TAS] InterPro:IPR003593
InterPro:IPR018999 Pfam:PF09416 SMART:SM00382 SGD:S000004685
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0003676 GO:GO:0016567
GO:GO:0030466 EMBL:BK006946 EMBL:Z49259 GO:GO:0005844 GO:GO:0008298
eggNOG:COG1112 InterPro:IPR014001 SMART:SM00487 GO:GO:0004004
GO:GO:0070478 GO:GO:0006449 GeneTree:ENSGT00550000074391
EMBL:X62394 EMBL:M76659 PIR:S23408 RefSeq:NP_013797.1 PDB:2XZL
PDBsum:2XZL ProteinModelPortal:P30771 SMR:P30771 DIP:DIP-2373N
IntAct:P30771 MINT:MINT-492322 STRING:P30771 PaxDb:P30771
PeptideAtlas:P30771 EnsemblFungi:YMR080C GeneID:855104
KEGG:sce:YMR080C CYGD:YMR080c HOGENOM:HOG000205990 KO:K14326
OMA:MFYEGSL OrthoDB:EOG405W86 EvolutionaryTrace:P30771
NextBio:978431 Genevestigator:P30771 GermOnline:YMR080C
Uniprot:P30771
Length = 971
Score = 395 (144.1 bits), Expect = 1.8e-32, P = 1.8e-32
Identities = 98/275 (35%), Positives = 156/275 (56%)
Query: 3 QLKFVVIDEAAQLKESESAIPLQLPCIQHAILVGDEVQLPAMVESSVSGEAYFGRSLFER 62
+ + V+IDE+ Q E E IP+ + + ILVGD QL ++ + +A +SLFER
Sbjct: 565 KFRTVLIDESTQASEPECLIPI-VKGAKQVILVGDHQQLGPVILERKAADAGLKQSLFER 623
Query: 63 LSYLGHPKHLLSMQYRMHPSISFFPNSYFYENKIRDAPTVRKRSYEKRFLPGPMYG-PYS 121
L LGH L +QYRM+P +S FP++ FYE +++ T+ +R+ P P+ G P
Sbjct: 624 LISLGHVPIRLEVQYRMNPYLSEFPSNMFYEGSLQNGVTIEQRTVPNSKFPWPIRGIPMM 683
Query: 122 FINVFGGREEFIEH--SCRNMVEVSVVMKILRNLYKAWVESKEKLSIGIVSPYSAQVIAI 179
F +G REE + S N +E +I+ L++ V+ ++ IG+++PY Q I
Sbjct: 684 FWANYG-REEISANGTSFLNRIEAMNCERIITKLFRDGVKPEQ---IGVITPYEGQRAYI 739
Query: 180 QE--KLGSKYEKIAGFAVKVKSIDGFQGGEEDIIIISTVRSNNTGSIGFASTPQRINVAL 237
+ ++ +K V+V S+D FQG E+D II+S VR+N +IGF P+R+NV L
Sbjct: 740 LQYMQMNGSLDKDLYIKVEVASVDAFQGREKDYIILSCVRANEQQAIGFLRDPRRLNVGL 799
Query: 238 TRARHCLWILGSERTLNHSESVWESLLDDAKARQC 272
TRA++ L ILG+ R+L + ++W LL + + C
Sbjct: 800 TRAKYGLVILGNPRSLARN-TLWNHLLIHFREKGC 833
>POMBASE|SPAC6G9.10c [details] [associations]
symbol:sen1 "ATP-dependent 5' to 3' DNA/RNA helicase
Sen1" species:4896 "Schizosaccharomyces pombe" [GO:0005524 "ATP
binding" evidence=IC] [GO:0005634 "nucleus" evidence=ISO;IDA]
[GO:0006364 "rRNA processing" evidence=ISO] [GO:0006369
"termination of RNA polymerase II transcription" evidence=ISO]
[GO:0008033 "tRNA processing" evidence=ISO] [GO:0008094
"DNA-dependent ATPase activity" evidence=IDA] [GO:0008186
"RNA-dependent ATPase activity" evidence=IDA] [GO:0016180 "snRNA
processing" evidence=ISO] [GO:0032575 "ATP-dependent 5'-3' RNA
helicase activity" evidence=IDA] [GO:0035649 "Nrd1 complex"
evidence=ISO] [GO:0043141 "ATP-dependent 5'-3' DNA helicase
activity" evidence=IDA] [GO:0043144 "snoRNA processing"
evidence=ISO] InterPro:IPR024714 PomBase:SPAC6G9.10c GO:GO:0005524
GO:GO:0005634 EMBL:CU329670 GenomeReviews:CU329670_GR GO:GO:0006397
GO:GO:0008033 eggNOG:COG1112 GO:GO:0006364 GO:GO:0006369
GO:GO:0043144 GO:GO:0043141 GO:GO:0016180 KO:K10706 GO:GO:0035649
PIR:T39072 RefSeq:NP_594119.1 ProteinModelPortal:Q92355
EnsemblFungi:SPAC6G9.10c.1 GeneID:2541556 KEGG:spo:SPAC6G9.10c
OrthoDB:EOG4BCHWF NextBio:20802652 GO:GO:0032575 InterPro:IPR024481
PANTHER:PTHR10887:SF164 Pfam:PF12726 Uniprot:Q92355
Length = 1687
Score = 398 (145.2 bits), Expect = 2.3e-32, P = 2.3e-32
Identities = 94/266 (35%), Positives = 150/266 (56%)
Query: 7 VVIDEAAQLKESESAIPLQLPCIQHAILVGDEVQLPAMVESSVSGEAYFGRSLFERLSY- 65
V+IDEAAQ E ++ IPL+ + ILVGD QLP V S + + +SLF R+
Sbjct: 1375 VIIDEAAQAVELDTIIPLRYGA-KKCILVGDPNQLPPTVLSKKAASLNYSQSLFVRIQKN 1433
Query: 66 LGHPKHLLSMQYRMHPSISFFPNSYFYENKIRDAPTVRKRSYEKRFLPGPMYGPYSFINV 125
+ LLS+QYRMHP IS FP+ FY++++ D + +++ + + P + Y +V
Sbjct: 1434 FSNQMCLLSIQYRMHPDISHFPSKKFYDSRLEDGDNMAEKTQQVWHV-NPKFTQYRLFDV 1492
Query: 126 FGGREEFIEHSCRNMVEVSVVMKILRNLYKAWVESKEKLSIGIVSPYSAQVIAIQEKLGS 185
G S N+ EV ++ ++ L + + IG+++PY +Q+ ++
Sbjct: 1493 RGKERTSNTMSTYNLEEVEYLVNMVDELLNKFPDVNFTGRIGVITPYRSQLHELRRAFKV 1552
Query: 186 KYEKIAGFAVKVKSIDGFQGGEEDIIIISTVRSNNTGSIGFASTPQRINVALTRARHCLW 245
KY K + ++++DGFQG E+DII S V+S + IGF +R+NVALTRAR L
Sbjct: 1553 KYGKSFMSTIDIQTVDGFQGQEKDIIFFSCVKSYSKHGIGFLRDFRRLNVALTRARSSLL 1612
Query: 246 ILGSERTLNHSESVWESLLDDAKARQ 271
I+G+ TL ++ +W SL+DDA +R+
Sbjct: 1613 IIGNMETLK-TDDLWGSLVDDALSRK 1637
>DICTYBASE|DDB_G0268914 [details] [associations]
symbol:DDB_G0268914 species:44689 "Dictyostelium
discoideum" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR003593
SMART:SM00382 dictyBase:DDB_G0268914 GO:GO:0005524
EMBL:AAFI02000004 GO:GO:0017111 eggNOG:COG1112 RefSeq:XP_647058.1
ProteinModelPortal:Q55EG2 EnsemblProtists:DDB0190122 GeneID:8616757
KEGG:ddi:DDB_G0268914 InParanoid:Q55EG2 OMA:ANCRVEN Uniprot:Q55EG2
Length = 4540
Score = 419 (152.6 bits), Expect = 2.7e-32, Sum P(2) = 2.7e-32
Identities = 104/263 (39%), Positives = 158/263 (60%)
Query: 7 VVIDEAAQLKESESAIPLQLPC--IQHAILVGDEVQLPAMVESSVSGEAYFGRSLFERLS 64
V++DEA Q E+ IPL L ++ ILVGD VQLP + S S G SLFERLS
Sbjct: 3696 VIVDEATQSCETSCIIPLSLGAKSMKKLILVGDPVQLPPTIFSKESIHCGLGISLFERLS 3755
Query: 65 YLGHPKHLLSMQYRMHPSISFFPNSYFYENKIRDAPTV-RKRSYEKRFLPGPMYGPYSFI 123
+ P +L++QYRMHP IS FP+S FY + ++D V +Y RF YG F
Sbjct: 3756 KV-LPVSMLNVQYRMHPLISKFPSSQFYHDILKDGDNVVSSDAYSLRFHENQDYGAIRFF 3814
Query: 124 NVFGGREEFIEHSCRNMVEVSVVMKILRNLYKAWVESKEKLSIGIVSPYSAQVIAIQEKL 183
+V REE + S +N +E+++V +++ L + E+K+ S GIV+PY Q ++++
Sbjct: 3815 DVTDSREERGKTSIKNQLEITMVFTLIKKLTQDHPETKQ-YSFGIVTPYKLQ----RKEI 3869
Query: 184 GSKYEKI-AGFAVKVKSIDGFQGGEEDIIIISTVRSNNTGSIGFASTPQRINVALTRARH 242
Y+++ +++K+ID FQG E+DI+I+S VR+ SIGF S +RINV++TRA++
Sbjct: 3870 EDAYKQLNLSLNIEIKTIDSFQGSEKDIMIMSCVRNE---SIGFLSDRRRINVSITRAKY 3926
Query: 243 CLWILGSERTLNHSESVWESLLD 265
L+I+G+ TL + W L+D
Sbjct: 3927 GLFIIGNA-TLLKLDRTWGELID 3948
Score = 48 (22.0 bits), Expect = 2.7e-32, Sum P(2) = 2.7e-32
Identities = 17/65 (26%), Positives = 30/65 (46%)
Query: 999 DVGLVRRSKEINKV--EQDFLQSCALHYYQLNDKKSMMKFVKAFHSMDLMRNFLKSKSCF 1056
D+ L+ S+ I KV Q+ L + L + + F K+F S ++ N + CF
Sbjct: 4115 DINLI--SENIQKVLNNQEILTNQDYPKILLEIIQELQSFNKSFISSTVLANKKLLRDCF 4172
Query: 1057 DELLV 1061
+ L+
Sbjct: 4173 NNYLI 4177
Score = 41 (19.5 bits), Expect = 1.4e-31, Sum P(2) = 1.4e-31
Identities = 13/82 (15%), Positives = 39/82 (47%)
Query: 1306 LAAINVHQLVSAGRSYWSSELLSVGMKVLGNLEALHKQLSKNSPTVFSQVLHLTCIYE-V 1364
L + N+ ++++ + + + ++++ L++ +K ++ ++L C +
Sbjct: 4118 LISENIQKVLNNQEILTNQDYPKILLEIIQELQSFNKSFISSTVLANKKLLR-DCFNNYL 4176
Query: 1365 AKFLLSSKYLNRRYYDEKILQK 1386
KF L KYL ++ ++ Q+
Sbjct: 4177 IKFPLYQKYLQQKQQQQQQQQQ 4198
>TAIR|locus:2171007 [details] [associations]
symbol:LBA1 "LOW-LEVEL BETA-AMYLASE 1" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003724 "RNA helicase activity" evidence=ISS] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISM;IDA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0010182 "sugar mediated signaling pathway"
evidence=RCA;IMP] [GO:0016246 "RNA interference" evidence=IGI]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0000184
"nuclear-transcribed mRNA catabolic process, nonsense-mediated
decay" evidence=IMP] [GO:0005829 "cytosol" evidence=IDA;RCA]
[GO:0009506 "plasmodesma" evidence=IDA] [GO:0042742 "defense
response to bacterium" evidence=IMP] [GO:0009755 "hormone-mediated
signaling pathway" evidence=RCA] [GO:0048825 "cotyledon
development" evidence=RCA] [GO:0000932 "cytoplasmic mRNA processing
body" evidence=IDA] [GO:0009744 "response to sucrose stimulus"
evidence=IGI] InterPro:IPR018999 Pfam:PF09416 GO:GO:0005829
GO:GO:0005886 GO:GO:0009506 GO:GO:0005524 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0016246 GO:GO:0000184 GO:GO:0046872
GO:GO:0003677 GO:GO:0009744 GO:GO:0008270 GO:GO:0010182
GO:GO:0004386 GO:GO:0000932 eggNOG:COG1112 InterPro:IPR014001
PROSITE:PS51192 EMBL:AB013394 HOGENOM:HOG000205990 KO:K14326
OMA:MFYEGSL EMBL:AF484122 IPI:IPI00541997 RefSeq:NP_199512.2
UniGene:At.8584 ProteinModelPortal:Q9FJR0 SMR:Q9FJR0 STRING:Q9FJR0
PaxDb:Q9FJR0 PRIDE:Q9FJR0 EnsemblPlants:AT5G47010.1 GeneID:834747
KEGG:ath:AT5G47010 GeneFarm:2422 TAIR:At5g47010 InParanoid:Q9FJR0
PhylomeDB:Q9FJR0 ProtClustDB:CLSN2680462 Genevestigator:Q9FJR0
GermOnline:AT5G47010 Uniprot:Q9FJR0
Length = 1254
Score = 392 (143.0 bits), Expect = 6.2e-32, P = 6.2e-32
Identities = 99/271 (36%), Positives = 150/271 (55%)
Query: 7 VVIDEAAQLKESESAIPLQLPCIQHAILVGDEVQLPAMVESSVSGEAYFGRSLFERLSYL 66
V+IDE+ Q E E IPL L ++ +LVGD QL ++ + A +SLFERL L
Sbjct: 653 VLIDESTQATEPECLIPLVLG-VKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVTL 711
Query: 67 GHPKHLLSMQYRMHPSISFFPNSYFYENKIRDAPTVRKRSYEKRFLPGPMYGPYSFINVF 126
G L +QYRMHP++S FP++ FYE +++ T+ +R P P+ F V
Sbjct: 712 GIKPIRLQVQYRMHPALSEFPSNSFYEGTLQNGVTIIERQTTGIDFPWPVPNRPMFFYVQ 771
Query: 127 GGREEFIEH--SCRNMVEVSVVMKILRNLYKAWVESKEKLSIGIVSPYSAQ---VIAIQE 181
G+EE S N E + V K++ K+ V + IG+++PY Q ++
Sbjct: 772 LGQEEISASGTSYLNRTEAANVEKLVTAFLKSGVVPSQ---IGVITPYEGQRAYIVNYMA 828
Query: 182 KLGSKYEKIAGFAVKVKSIDGFQGGEEDIIIISTVRSNNTGSIGFASTPQRINVALTRAR 241
+ GS +++ ++V S+D FQG E+D II+S VRSN IGF + P+R+NVALTRAR
Sbjct: 829 RNGSLRQQLYK-EIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRAR 887
Query: 242 HCLWILGSERTLNHSESVWESLLDDAKARQC 272
+ + ILG+ + L+ + +W LL K +C
Sbjct: 888 YGIVILGNPKVLS-KQPLWNGLLTHYKEHEC 917
>FB|FBgn0030354 [details] [associations]
symbol:Upf1 "Upf1" species:7227 "Drosophila melanogaster"
[GO:0004386 "helicase activity" evidence=ISS] [GO:0000184
"nuclear-transcribed mRNA catabolic process, nonsense-mediated
decay" evidence=ISS;IMP;NAS] [GO:0005737 "cytoplasm"
evidence=IEA;NAS] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0016246 "RNA interference" evidence=IMP]
[GO:0035195 "gene silencing by miRNA" evidence=IMP] [GO:0071456
"cellular response to hypoxia" evidence=IMP] [GO:0035145 "exon-exon
junction complex" evidence=IDA] InterPro:IPR018999 Pfam:PF09416
GO:GO:0005524 GO:GO:0005737 GO:GO:0000184 GO:GO:0046872
GO:GO:0003677 EMBL:AE014298 GO:GO:0008270 GO:GO:0071456
GO:GO:0004386 eggNOG:COG1112 GeneTree:ENSGT00550000074391 KO:K14326
OMA:MFYEGSL EMBL:AY061379 RefSeq:NP_572767.1 UniGene:Dm.3617
ProteinModelPortal:Q9VYS3 SMR:Q9VYS3 STRING:Q9VYS3 PaxDb:Q9VYS3
PRIDE:Q9VYS3 EnsemblMetazoa:FBtr0073596 GeneID:32153
KEGG:dme:Dmel_CG1559 UCSC:CG1559-RA CTD:5976 FlyBase:FBgn0030354
InParanoid:Q9VYS3 OrthoDB:EOG476HF1 PhylomeDB:Q9VYS3
GenomeRNAi:32153 NextBio:777131 Bgee:Q9VYS3 GermOnline:CG1559
Uniprot:Q9VYS3
Length = 1180
Score = 386 (140.9 bits), Expect = 2.5e-31, P = 2.5e-31
Identities = 101/278 (36%), Positives = 153/278 (55%)
Query: 1 MEQLKF--VVIDEAAQLKESESAIPLQLPCIQHAILVGDEVQLPAMVESSVSGEAYFGRS 58
+ ++KF ++IDE+ Q E E +P+ L Q ILVGD QL +V + A +S
Sbjct: 606 LSRVKFTSILIDESMQSTEPECMVPVVLGAKQ-LILVGDHCQLGPVVMCKKAARAGLSQS 664
Query: 59 LFERLSYLGHPKHLLSMQYRMHPSISFFPNSYFYENKIRDAPTVRKRSYEKRFLPGPMYG 118
LFERL LG L +QYRMHP +S FP+++FYE +++ R + F P P
Sbjct: 665 LFERLVVLGIRPFRLEVQYRMHPELSQFPSNFFYEGSLQNGVCAEDRRLKLDF-PWPQPE 723
Query: 119 PYSFINVFGGREEFIEH--SCRNMVEVSVVMKILRNLYKAWVESKEKLSIGIVSPYSAQ- 175
F V G+EE S N E + V KI KA ++ ++ IGI++PY Q
Sbjct: 724 RPMFFLVTQGQEEIAGSGTSFLNRTEAANVEKITTRFLKAGIKPEQ---IGIITPYEGQR 780
Query: 176 --VIAIQEKLGSKYEKIAGFAVKVKSIDGFQGGEEDIIIISTVRSNNTGSIGFASTPQRI 233
++ + GS + ++ +++ S+D FQG E+DIII+S VRSN IGF + P+R+
Sbjct: 781 AYLVQYMQYQGSLHSRLYQ-EIEIASVDAFQGREKDIIIMSCVRSNERQGIGFLNDPRRL 839
Query: 234 NVALTRARHCLWILGSERTLNHSESVWESLLDDAKARQ 271
NVALTRA+ + I+G+ + L + +W LL+ K R+
Sbjct: 840 NVALTRAKFGIIIVGNPKVLA-KQQLWNHLLNFYKDRK 876
>ZFIN|ZDB-GENE-040426-2836 [details] [associations]
symbol:upf1 "upf1 regulator of nonsense
transcripts homolog (yeast)" species:7955 "Danio rerio" [GO:0003677
"DNA binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0000184 "nuclear-transcribed mRNA
catabolic process, nonsense-mediated decay" evidence=IEA;IMP]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0009790 "embryo
development" evidence=IMP] InterPro:IPR018999 Pfam:PF09416
ZFIN:ZDB-GENE-040426-2836 GO:GO:0005524 GO:GO:0005737 GO:GO:0000184
GO:GO:0003677 GO:GO:0008270 GO:GO:0009790 GO:GO:0004386
HOGENOM:HOG000205990 KO:K14326 CTD:5976 HOVERGEN:HBG061556
EMBL:BC045353 EMBL:FM986817 IPI:IPI00491565 RefSeq:NP_998639.1
UniGene:Dr.96025 SMR:Q7ZVZ4 STRING:Q7ZVZ4 GeneID:406783
KEGG:dre:406783 NextBio:20818296 Uniprot:Q7ZVZ4
Length = 1100
Score = 385 (140.6 bits), Expect = 2.8e-31, P = 2.8e-31
Identities = 102/275 (37%), Positives = 152/275 (55%)
Query: 3 QLKFVVIDEAAQLKESESAIPLQLPCIQHAILVGDEVQLPAMVESSVSGEAYFGRSLFER 62
Q + ++IDE+ Q E E +P+ L Q ILVGD QL +V + +A +SLFER
Sbjct: 609 QFRSILIDESTQATEPECMVPVVLGAKQ-LILVGDHCQLGPVVMCKKAAKAGLSQSLFER 667
Query: 63 LSYLGHPKHLLSMQYRMHPSISFFPNSYFYENKIRDAPTVRKRSYEKRF-LPGPMYGPYS 121
L LG L +QYRMHP++S FP++ FYE +++ T R +K F P
Sbjct: 668 LVVLGIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVTAADR-LKKGFDFQWPQPDKPM 726
Query: 122 FINVFGGREEFIEH--SCRNMVEVSVVMKILRNLYKAWVESKEKLSIGIVSPYSAQ---V 176
F V G+EE S N E + V KI L KA + + IGI++PY Q +
Sbjct: 727 FFYVTQGQEEIASSGTSYLNRTEAANVEKITTRLLKAGAKPDQ---IGIITPYEGQRSYL 783
Query: 177 IAIQEKLGSKYEKIAGFAVKVKSIDGFQGGEEDIIIISTVRSNNTGSIGFASTPQRINVA 236
+ + GS + K+ V++ S+D FQG E+D II+S VR+N IGF + P+R+NVA
Sbjct: 784 VQYMQFSGSLHTKLYQ-EVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVA 842
Query: 237 LTRARHCLWILGSERTLNHSESVWESLLDDAKARQ 271
LTRAR+ + I+G+ + L+ + +W LL+ K ++
Sbjct: 843 LTRARYGVIIVGNPKALS-KQPLWNHLLNYYKEQK 876
>UNIPROTKB|E1C0J4 [details] [associations]
symbol:UPF1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000184 "nuclear-transcribed mRNA catabolic process,
nonsense-mediated decay" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR018999 Pfam:PF09416 GO:GO:0005524 GO:GO:0005737
GO:GO:0000184 GO:GO:0003677 GO:GO:0008270 GO:GO:0004386
GeneTree:ENSGT00550000074391 EMBL:AADN02071779 IPI:IPI00598917
Ensembl:ENSGALT00000005099 NextBio:20823079 ArrayExpress:E1C0J4
Uniprot:E1C0J4
Length = 1117
Score = 385 (140.6 bits), Expect = 2.9e-31, P = 2.9e-31
Identities = 102/275 (37%), Positives = 152/275 (55%)
Query: 3 QLKFVVIDEAAQLKESESAIPLQLPCIQHAILVGDEVQLPAMVESSVSGEAYFGRSLFER 62
Q + ++IDE+ Q E E +P+ L Q ILVGD QL +V + +A +SLFER
Sbjct: 628 QFRSILIDESTQATEPECMVPVVLGAKQ-LILVGDHCQLGPVVMCKKAAKAGLSQSLFER 686
Query: 63 LSYLGHPKHLLSMQYRMHPSISFFPNSYFYENKIRDAPTVRKRSYEKRF-LPGPMYGPYS 121
L LG L +QYRMHP++S FP++ FYE +++ T R +K F P
Sbjct: 687 LVVLGIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVTAADR-VKKGFDFQWPQPDKPM 745
Query: 122 FINVFGGREEFIEH--SCRNMVEVSVVMKILRNLYKAWVESKEKLSIGIVSPYSAQ---V 176
F V G+EE S N E + V KI L KA + + IGI++PY Q +
Sbjct: 746 FFYVTQGQEEIASSGTSYLNRTEAANVEKITTKLLKAGAKPDQ---IGIITPYEGQRSYL 802
Query: 177 IAIQEKLGSKYEKIAGFAVKVKSIDGFQGGEEDIIIISTVRSNNTGSIGFASTPQRINVA 236
+ + GS + K+ V++ S+D FQG E+D II+S VR+N IGF + P+R+NVA
Sbjct: 803 VQYMQFSGSLHTKLYQ-EVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVA 861
Query: 237 LTRARHCLWILGSERTLNHSESVWESLLDDAKARQ 271
LTRAR+ + I+G+ + L+ + +W LL+ K ++
Sbjct: 862 LTRARYGVIIVGNPKALS-KQPLWNHLLNYYKEQK 895
>UNIPROTKB|E1BEK9 [details] [associations]
symbol:UPF1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071044 "histone mRNA catabolic process" evidence=IEA]
[GO:0044530 "supraspliceosomal complex" evidence=IEA] [GO:0035145
"exon-exon junction complex" evidence=IEA] [GO:0009048 "dosage
compensation by inactivation of X chromosome" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006260 "DNA replication" evidence=IEA]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0000785
"chromatin" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0000184 "nuclear-transcribed mRNA catabolic process,
nonsense-mediated decay" evidence=IEA] InterPro:IPR018999
Pfam:PF09416 GO:GO:0005524 GO:GO:0005737 GO:GO:0000184
GO:GO:0003677 GO:GO:0006260 GO:GO:0008270 GO:GO:0006281
GO:GO:0000785 GO:GO:0003682 GO:GO:0007049 GO:GO:0071044
GO:GO:0009048 GO:GO:0004004 GO:GO:0035145
GeneTree:ENSGT00550000074391 OMA:MFYEGSL EMBL:DAAA02019036
IPI:IPI00685259 Ensembl:ENSBTAT00000027868 Uniprot:E1BEK9
Length = 1127
Score = 385 (140.6 bits), Expect = 2.9e-31, P = 2.9e-31
Identities = 102/275 (37%), Positives = 152/275 (55%)
Query: 3 QLKFVVIDEAAQLKESESAIPLQLPCIQHAILVGDEVQLPAMVESSVSGEAYFGRSLFER 62
Q + ++IDE+ Q E E +P+ L Q ILVGD QL +V + +A +SLFER
Sbjct: 638 QFRSILIDESTQATEPECMVPVVLGAKQ-LILVGDHCQLGPVVMCKKAAKAGLSQSLFER 696
Query: 63 LSYLGHPKHLLSMQYRMHPSISFFPNSYFYENKIRDAPTVRKRSYEKRF-LPGPMYGPYS 121
L LG L +QYRMHP++S FP++ FYE +++ T R +K F P
Sbjct: 697 LVVLGIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVTAADR-VKKGFDFQWPQPDKPM 755
Query: 122 FINVFGGREEFIEH--SCRNMVEVSVVMKILRNLYKAWVESKEKLSIGIVSPYSAQ---V 176
F V G+EE S N E + V KI L KA + + IGI++PY Q +
Sbjct: 756 FFYVTQGQEEIASSGTSYLNRTEAANVEKITTKLLKAGAKPDQ---IGIITPYEGQRSYL 812
Query: 177 IAIQEKLGSKYEKIAGFAVKVKSIDGFQGGEEDIIIISTVRSNNTGSIGFASTPQRINVA 236
+ + GS + K+ V++ S+D FQG E+D II+S VR+N IGF + P+R+NVA
Sbjct: 813 VQYMQFSGSLHTKLYQ-EVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVA 871
Query: 237 LTRARHCLWILGSERTLNHSESVWESLLDDAKARQ 271
LTRAR+ + I+G+ + L+ + +W LL+ K ++
Sbjct: 872 LTRARYGVIIVGNPKALS-KQPLWNHLLNYYKEQK 905
>UNIPROTKB|E1C0J3 [details] [associations]
symbol:UPF1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000184 "nuclear-transcribed mRNA catabolic process,
nonsense-mediated decay" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0000785 "chromatin" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=IEA] [GO:0006260 "DNA replication"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0009048 "dosage compensation by
inactivation of X chromosome" evidence=IEA] [GO:0035145 "exon-exon
junction complex" evidence=IEA] [GO:0044530 "supraspliceosomal
complex" evidence=IEA] [GO:0071044 "histone mRNA catabolic process"
evidence=IEA] InterPro:IPR018999 Pfam:PF09416 GO:GO:0005524
GO:GO:0005737 GO:GO:0000184 GO:GO:0003677 GO:GO:0006260
GO:GO:0008270 GO:GO:0006281 GO:GO:0000785 GO:GO:0003682
GO:GO:0007049 GO:GO:0071044 GO:GO:0009048 GO:GO:0004004
GO:GO:0035145 GeneTree:ENSGT00550000074391 OMA:MFYEGSL
EMBL:AADN02071779 IPI:IPI00571950 Ensembl:ENSGALT00000005101
ArrayExpress:E1C0J3 Uniprot:E1C0J3
Length = 1128
Score = 385 (140.6 bits), Expect = 2.9e-31, P = 2.9e-31
Identities = 102/275 (37%), Positives = 152/275 (55%)
Query: 3 QLKFVVIDEAAQLKESESAIPLQLPCIQHAILVGDEVQLPAMVESSVSGEAYFGRSLFER 62
Q + ++IDE+ Q E E +P+ L Q ILVGD QL +V + +A +SLFER
Sbjct: 639 QFRSILIDESTQATEPECMVPVVLGAKQ-LILVGDHCQLGPVVMCKKAAKAGLSQSLFER 697
Query: 63 LSYLGHPKHLLSMQYRMHPSISFFPNSYFYENKIRDAPTVRKRSYEKRF-LPGPMYGPYS 121
L LG L +QYRMHP++S FP++ FYE +++ T R +K F P
Sbjct: 698 LVVLGIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVTAADR-VKKGFDFQWPQPDKPM 756
Query: 122 FINVFGGREEFIEH--SCRNMVEVSVVMKILRNLYKAWVESKEKLSIGIVSPYSAQ---V 176
F V G+EE S N E + V KI L KA + + IGI++PY Q +
Sbjct: 757 FFYVTQGQEEIASSGTSYLNRTEAANVEKITTKLLKAGAKPDQ---IGIITPYEGQRSYL 813
Query: 177 IAIQEKLGSKYEKIAGFAVKVKSIDGFQGGEEDIIIISTVRSNNTGSIGFASTPQRINVA 236
+ + GS + K+ V++ S+D FQG E+D II+S VR+N IGF + P+R+NVA
Sbjct: 814 VQYMQFSGSLHTKLYQ-EVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVA 872
Query: 237 LTRARHCLWILGSERTLNHSESVWESLLDDAKARQ 271
LTRAR+ + I+G+ + L+ + +W LL+ K ++
Sbjct: 873 LTRARYGVIIVGNPKALS-KQPLWNHLLNYYKEQK 906
>UNIPROTKB|Q92900 [details] [associations]
symbol:UPF1 "Regulator of nonsense transcripts 1"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0009048 "dosage compensation by
inactivation of X chromosome" evidence=IEA] [GO:0000932
"cytoplasmic mRNA processing body" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0000184 "nuclear-transcribed
mRNA catabolic process, nonsense-mediated decay"
evidence=IDA;NAS;IMP;TAS] [GO:0006449 "regulation of translational
termination" evidence=IMP;NAS] [GO:0004386 "helicase activity"
evidence=NAS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IDA] [GO:0003723 "RNA binding" evidence=NAS] [GO:0005737
"cytoplasm" evidence=NAS] [GO:0071044 "histone mRNA catabolic
process" evidence=IMP] [GO:0035145 "exon-exon junction complex"
evidence=IDA] [GO:0044530 "supraspliceosomal complex" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0000785 "chromatin"
evidence=IDA] [GO:0003682 "chromatin binding" evidence=IDA]
[GO:0006260 "DNA replication" evidence=IMP] [GO:0006281 "DNA
repair" evidence=IDA] [GO:0006406 "mRNA export from nucleus"
evidence=TAS] [GO:0007049 "cell cycle" evidence=IMP] [GO:0005829
"cytosol" evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0016070 "RNA metabolic process" evidence=TAS] [GO:0016071 "mRNA
metabolic process" evidence=TAS] Reactome:REACT_71
Reactome:REACT_21257 InterPro:IPR018999 Pfam:PF09416 GO:GO:0005829
GO:GO:0005524 GO:GO:0010467 GO:GO:0000184 GO:GO:0046872
GO:GO:0003677 GO:GO:0006260 GO:GO:0008270 GO:GO:0006281
GO:GO:0000785 GO:GO:0003682 GO:GO:0003723 GO:GO:0007049
GO:GO:0006406 GO:GO:0000932 eggNOG:COG1112 GO:GO:0071044
GO:GO:0009048 GO:GO:0004004 GO:GO:0035145 EMBL:AC003972
GO:GO:0044530 GO:GO:0006449 HOGENOM:HOG000205990 KO:K14326
OMA:MFYEGSL CTD:5976 EMBL:U65533 EMBL:U59323 EMBL:D86988
EMBL:AF074016 EMBL:BC039817 IPI:IPI00034049 IPI:IPI00399170
RefSeq:NP_002902.2 UniGene:Hs.515266 PDB:2GJK PDB:2GK6 PDB:2GK7
PDB:2IYK PDB:2WJV PDB:2WJY PDB:2XZO PDB:2XZP PDBsum:2GJK
PDBsum:2GK6 PDBsum:2GK7 PDBsum:2IYK PDBsum:2WJV PDBsum:2WJY
PDBsum:2XZO PDBsum:2XZP ProteinModelPortal:Q92900 SMR:Q92900
DIP:DIP-29875N IntAct:Q92900 MINT:MINT-5005507 STRING:Q92900
PhosphoSite:Q92900 DMDM:17380291 PaxDb:Q92900 PRIDE:Q92900
Ensembl:ENST00000262803 GeneID:5976 KEGG:hsa:5976 UCSC:uc002nkf.3
UCSC:uc002nkg.3 GeneCards:GC19P018942 HGNC:HGNC:9962 HPA:HPA019587
HPA:HPA020857 MIM:601430 neXtProt:NX_Q92900 PharmGKB:PA34328
HOVERGEN:HBG061556 InParanoid:Q92900 ChiTaRS:UPF1
EvolutionaryTrace:Q92900 GenomeRNAi:5976 NextBio:23259
ArrayExpress:Q92900 Bgee:Q92900 CleanEx:HS_UPF1
Genevestigator:Q92900 GermOnline:ENSG00000005007 Uniprot:Q92900
Length = 1129
Score = 385 (140.6 bits), Expect = 2.9e-31, P = 2.9e-31
Identities = 102/275 (37%), Positives = 152/275 (55%)
Query: 3 QLKFVVIDEAAQLKESESAIPLQLPCIQHAILVGDEVQLPAMVESSVSGEAYFGRSLFER 62
Q + ++IDE+ Q E E +P+ L Q ILVGD QL +V + +A +SLFER
Sbjct: 640 QFRSILIDESTQATEPECMVPVVLGAKQ-LILVGDHCQLGPVVMCKKAAKAGLSQSLFER 698
Query: 63 LSYLGHPKHLLSMQYRMHPSISFFPNSYFYENKIRDAPTVRKRSYEKRF-LPGPMYGPYS 121
L LG L +QYRMHP++S FP++ FYE +++ T R +K F P
Sbjct: 699 LVVLGIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVTAADR-VKKGFDFQWPQPDKPM 757
Query: 122 FINVFGGREEFIEH--SCRNMVEVSVVMKILRNLYKAWVESKEKLSIGIVSPYSAQ---V 176
F V G+EE S N E + V KI L KA + + IGI++PY Q +
Sbjct: 758 FFYVTQGQEEIASSGTSYLNRTEAANVEKITTKLLKAGAKPDQ---IGIITPYEGQRSYL 814
Query: 177 IAIQEKLGSKYEKIAGFAVKVKSIDGFQGGEEDIIIISTVRSNNTGSIGFASTPQRINVA 236
+ + GS + K+ V++ S+D FQG E+D II+S VR+N IGF + P+R+NVA
Sbjct: 815 VQYMQFSGSLHTKLYQ-EVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVA 873
Query: 237 LTRARHCLWILGSERTLNHSESVWESLLDDAKARQ 271
LTRAR+ + I+G+ + L+ + +W LL+ K ++
Sbjct: 874 LTRARYGVIIVGNPKALS-KQPLWNHLLNYYKEQK 907
>UNIPROTKB|E2RL81 [details] [associations]
symbol:UPF1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0000184
"nuclear-transcribed mRNA catabolic process, nonsense-mediated
decay" evidence=IEA] InterPro:IPR018999 Pfam:PF09416 GO:GO:0005524
GO:GO:0005737 GO:GO:0000184 GO:GO:0003677 GO:GO:0008270
GO:GO:0004386 GeneTree:ENSGT00550000074391 OMA:MFYEGSL
EMBL:AAEX03012279 Ensembl:ENSCAFT00000023180 Uniprot:E2RL81
Length = 1130
Score = 385 (140.6 bits), Expect = 2.9e-31, P = 2.9e-31
Identities = 102/275 (37%), Positives = 152/275 (55%)
Query: 3 QLKFVVIDEAAQLKESESAIPLQLPCIQHAILVGDEVQLPAMVESSVSGEAYFGRSLFER 62
Q + ++IDE+ Q E E +P+ L Q ILVGD QL +V + +A +SLFER
Sbjct: 641 QFRSILIDESTQATEPECMVPVVLGAKQ-LILVGDHCQLGPVVMCKKAAKAGLSQSLFER 699
Query: 63 LSYLGHPKHLLSMQYRMHPSISFFPNSYFYENKIRDAPTVRKRSYEKRF-LPGPMYGPYS 121
L LG L +QYRMHP++S FP++ FYE +++ T R +K F P
Sbjct: 700 LVVLGIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVTAADR-VKKGFDFQWPQPDKPM 758
Query: 122 FINVFGGREEFIEH--SCRNMVEVSVVMKILRNLYKAWVESKEKLSIGIVSPYSAQ---V 176
F V G+EE S N E + V KI L KA + + IGI++PY Q +
Sbjct: 759 FFYVTQGQEEIASSGTSYLNRTEAANVEKITTKLLKAGAKPDQ---IGIITPYEGQRSYL 815
Query: 177 IAIQEKLGSKYEKIAGFAVKVKSIDGFQGGEEDIIIISTVRSNNTGSIGFASTPQRINVA 236
+ + GS + K+ V++ S+D FQG E+D II+S VR+N IGF + P+R+NVA
Sbjct: 816 VQYMQFSGSLHTKLYQ-EVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVA 874
Query: 237 LTRARHCLWILGSERTLNHSESVWESLLDDAKARQ 271
LTRAR+ + I+G+ + L+ + +W LL+ K ++
Sbjct: 875 LTRARYGVIIVGNPKALS-KQPLWNHLLNYYKEQK 908
>UNIPROTKB|E1C4T7 [details] [associations]
symbol:Gga.18015 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005654 "nucleoplasm" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006302 "double-strand break repair"
evidence=IEA] [GO:0006369 "termination of RNA polymerase II
transcription" evidence=IEA] [GO:0007623 "circadian rhythm"
evidence=IEA] InterPro:IPR026121 GO:GO:0005737 GO:GO:0005654
GO:GO:0006302 GeneTree:ENSGT00580000081652 OMA:RLINHFE
PANTHER:PTHR10887:SF15 EMBL:AADN02026516 IPI:IPI00575045
Ensembl:ENSGALT00000005801 Uniprot:E1C4T7
Length = 2503
Score = 389 (142.0 bits), Expect = 3.6e-31, P = 3.6e-31
Identities = 109/299 (36%), Positives = 163/299 (54%)
Query: 1 MEQLKFVVIDEAAQLKESESAIPLQLPCIQHAILVGDEVQLPAMVESSVSGEAYFGRSLF 60
++ V++DEA Q E E+ IPL C +LVGD QLP ++S + E +G+SL
Sbjct: 2195 LDPFSCVIVDEAGQSCEVETLIPLIHRC-NKLVLVGDPRQLPPTIKSIKAQEYGYGQSLM 2253
Query: 61 ERLS-YLGH----------PKHLLSMQYRMHPSISFFPNSYFYENKIRDAPTVRKRSYEK 109
RL +L P L++QYRMHP I FP+SY Y+ ++ K + E
Sbjct: 2254 ARLQRHLEEQVQNNLLRRLPVVQLTVQYRMHPDICLFPSSYIYDKTLK----TDKATEEN 2309
Query: 110 RFLPGPMYGPYSFINVFGGREEFIEHSCRNMVEVSVVMKILRNLYKAWVESKEKLS---I 166
R + PY +V G EE + S N EV +V++I+R + E ++ L I
Sbjct: 2310 RCSSEWPFQPYLVFDVGDGHEERDKDSFSNPQEVKLVLEIIRTIK----EKRKDLGLRRI 2365
Query: 167 GIVSPYSAQVIAIQEKLGSKYEKIAGFAVKVKSIDGFQGGEEDIIIISTVRSNNT-GSIG 225
GI++PYSAQ IQE+L ++ + +V ++D FQG E+D II++ VR+N++ GSIG
Sbjct: 2366 GIITPYSAQKKKIQEELDRVFKNNS--PGEVDTVDAFQGREKDCIIVTCVRANSSKGSIG 2423
Query: 226 FASTPQRINVALTRARHCLWILGSERTLNHSESVWESLLDDAKARQCFFNIDEDKDLAK 284
F ++ QR+NV +TRAR L+ILG +TL ++ W L+ DA+ R DK K
Sbjct: 2424 FLASLQRLNVTITRARFSLFILGRLKTLMENKD-WNKLIQDAQRRGAIIKTS-DKSYKK 2480
>MGI|MGI:107995 [details] [associations]
symbol:Upf1 "UPF1 regulator of nonsense transcripts homolog
(yeast)" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000184 "nuclear-transcribed mRNA
catabolic process, nonsense-mediated decay" evidence=ISO]
[GO:0000785 "chromatin" evidence=ISO] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=ISO]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=ISO] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0006260 "DNA replication" evidence=ISO]
[GO:0006281 "DNA repair" evidence=ISO] [GO:0006449 "regulation of
translational termination" evidence=ISO] [GO:0007049 "cell cycle"
evidence=ISO] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0009048 "dosage compensation by inactivation of X chromosome"
evidence=IMP] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0035145 "exon-exon junction complex" evidence=ISO] [GO:0044530
"supraspliceosomal complex" evidence=ISO] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0071044 "histone mRNA catabolic process"
evidence=ISO] InterPro:IPR018999 Pfam:PF09416 MGI:MGI:107995
GO:GO:0005524 GO:GO:0000184 GO:GO:0046872 GO:GO:0003677
GO:GO:0006260 GO:GO:0008270 GO:GO:0006281 GO:GO:0000785
GO:GO:0003682 GO:GO:0003723 GO:GO:0007049 GO:GO:0000932
eggNOG:COG1112 GO:GO:0071044 GO:GO:0009048 GO:GO:0004004
GO:GO:0035145 GO:GO:0006449 GeneTree:ENSGT00550000074391
HOGENOM:HOG000205990 KO:K14326 OMA:MFYEGSL CTD:5976
HOVERGEN:HBG061556 ChiTaRS:UPF1 EMBL:AF322655 EMBL:AY597039
EMBL:AY597038 EMBL:AK148196 EMBL:BC030916 EMBL:BC052149
EMBL:BC056442 EMBL:AF182947 IPI:IPI00420949 IPI:IPI00850525
RefSeq:NP_001116301.1 RefSeq:NP_109605.2 UniGene:Mm.390048
ProteinModelPortal:Q9EPU0 SMR:Q9EPU0 STRING:Q9EPU0
PhosphoSite:Q9EPU0 PaxDb:Q9EPU0 PRIDE:Q9EPU0
Ensembl:ENSMUST00000075666 GeneID:19704 KEGG:mmu:19704
UCSC:uc009mab.2 UCSC:uc012gfa.1 InParanoid:Q9EPU0 OrthoDB:EOG4P8FH8
NextBio:297078 Bgee:Q9EPU0 Genevestigator:Q9EPU0
GermOnline:ENSMUSG00000058301 Uniprot:Q9EPU0
Length = 1124
Score = 384 (140.2 bits), Expect = 3.7e-31, P = 3.7e-31
Identities = 102/275 (37%), Positives = 151/275 (54%)
Query: 3 QLKFVVIDEAAQLKESESAIPLQLPCIQHAILVGDEVQLPAMVESSVSGEAYFGRSLFER 62
Q + ++IDE+ Q E E +P+ L Q ILVGD QL +V + +A +SLFER
Sbjct: 635 QFRSILIDESTQATEPECMVPVVLGAKQ-LILVGDHCQLGPVVMCKKAAKAGLSQSLFER 693
Query: 63 LSYLGHPKHLLSMQYRMHPSISFFPNSYFYENKIRDAPTVRKRSYEKRF-LPGPMYGPYS 121
L LG L +QYRMHP++S FP++ FYE +++ T R +K F P
Sbjct: 694 LVVLGIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVTAADR-VKKGFDFQWPQPDKPM 752
Query: 122 FINVFGGREEFIEH--SCRNMVEVSVVMKILRNLYKAWVESKEKLSIGIVSPYSAQ---V 176
F V G+EE S N E + V KI L KA + + IGI++PY Q +
Sbjct: 753 FFYVTQGQEEIASSGTSYLNRTEAANVEKITTKLLKAGAKPDQ---IGIITPYEGQRSYL 809
Query: 177 IAIQEKLGSKYEKIAGFAVKVKSIDGFQGGEEDIIIISTVRSNNTGSIGFASTPQRINVA 236
+ + GS + K+ V++ S+D FQG E+D II+S VR+N IGF + P+R+NVA
Sbjct: 810 VQYMQFSGSLHTKLYQ-EVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVA 868
Query: 237 LTRARHCLWILGSERTLNHSESVWESLLDDAKARQ 271
LTRAR+ + I+G+ + L+ + +W LL K ++
Sbjct: 869 LTRARYGVIIVGNPKALS-KQPLWNHLLSYYKEQK 902
>DICTYBASE|DDB_G0268660 [details] [associations]
symbol:DDB_G0268660 "DNA2/NAM7 helicase family
protein" species:44689 "Dictyostelium discoideum" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
InterPro:IPR003593 SMART:SM00382 dictyBase:DDB_G0268660
Pfam:PF03828 GO:GO:0005524 EMBL:AAFI02000004 GO:GO:0004386
eggNOG:COG1112 InterPro:IPR014001 SMART:SM00487 InterPro:IPR002058
ProtClustDB:CLSZ2429765 RefSeq:XP_646847.2
ProteinModelPortal:Q55F23 EnsemblProtists:DDB0304625 GeneID:8616530
KEGG:ddi:DDB_G0268660 InParanoid:Q55F23 Uniprot:Q55F23
Length = 2314
Score = 423 (154.0 bits), Expect = 5.4e-31, Sum P(3) = 5.4e-31
Identities = 101/255 (39%), Positives = 152/255 (59%)
Query: 7 VVIDEAAQLKESESAIPLQLPCIQHAILVGDEVQLPAMVESSVSGEAYFGRSLFERLSYL 66
V++DE+ Q E S IPL + I+ ILVGD +QLP + SS S E SLFERLS +
Sbjct: 1534 VLVDESTQSSEPASLIPLCIGNIEKLILVGDPLQLPPTIFSSGSAENGLNISLFERLSKV 1593
Query: 67 GHPKHLLSMQYRMHPSISFFPNSYFYENKIRDAPTVRKRSYEKR-FLPGPMYGPYSFINV 125
P +L+ QYRMHP+IS FP++ FY++++ D V+ Y + F YGP F +V
Sbjct: 1594 -LPVEMLNTQYRMHPTISRFPSNQFYKDRLLDGDNVKSLVYNQHNFHSDIKYGPIRFYDV 1652
Query: 126 FGGREEFIEHSCRNMVEVSVVMKILRNLYKAWVESKEKLSIGIVSPYSAQVIAIQEKLGS 185
+EE + S +N +E+++V +++ L + + E K K S GI++PY Q I+E+
Sbjct: 1653 IDSKEESGKRSLKNKLEITMVFTLIKKLVQDYPECK-KFSFGIITPYKLQKSEIKEQ-HK 1710
Query: 186 KYEKIAGFAVKVKSIDGFQGGEEDIIIISTVRSNNTGSIGFASTPQRINVALTRARHCLW 245
++ ++ +IDG QG E+DIII+S VRS IGF S +RINVALTRA+ L+
Sbjct: 1711 QFNYPLN--IETSTIDGVQGSEKDIIILSCVRSER---IGFLSDRRRINVALTRAKFGLF 1765
Query: 246 ILGSERTLNHSESVW 260
++G+ + L + W
Sbjct: 1766 VIGNSKLLK-KDRTW 1779
Score = 42 (19.8 bits), Expect = 5.4e-31, Sum P(3) = 5.4e-31
Identities = 22/89 (24%), Positives = 34/89 (38%)
Query: 1313 QLVSAGRSYWSSELLSVGMKVLGNLEALHKQLSKN-SPTVFSQVLHLTCIYEVAKFLLSS 1371
+L+S G + S L L L L N S T HL +Y+
Sbjct: 1997 KLISEGFATASINLYG---SFLSGLSLNDSDLDINFSSTQKEDTTHLKQVYKYLNRSQLY 2053
Query: 1372 KYLNRRYYDEKILQKFVELSTEHFFDFIF 1400
K + +R + + +F E+S+ FD F
Sbjct: 2054 KLIEKRISAKVPIIRFKEISSGIHFDMCF 2082
Score = 38 (18.4 bits), Expect = 5.4e-31, Sum P(3) = 5.4e-31
Identities = 10/38 (26%), Positives = 21/38 (55%)
Query: 1134 AKSLAKSNS-NQFYEFVCTEASILSNDESDLFIMNQQL 1170
+K L K + F ++V + S++S D + ++ QQ+
Sbjct: 1770 SKLLKKDRTWGPFCQYVHSINSMVSIDSKGISVLEQQI 1807
>DICTYBASE|DDB_G0274399 [details] [associations]
symbol:DDB_G0274399 "DNA2/NAM7 helicase family
protein" species:44689 "Dictyostelium discoideum" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0003674 "molecular_function" evidence=ND] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] InterPro:IPR003593 SMART:SM00382
dictyBase:DDB_G0274399 GO:GO:0005524 GO:GO:0005634
EMBL:AAFI02000012 GO:GO:0004386 eggNOG:COG1112 RefSeq:XP_644230.1
ProteinModelPortal:Q86AS0 EnsemblProtists:DDB0237968 GeneID:8619659
KEGG:ddi:DDB_G0274399 OMA:LIMISLH Uniprot:Q86AS0
Length = 967
Score = 392 (143.0 bits), Expect = 1.6e-30, Sum P(2) = 1.6e-30
Identities = 99/285 (34%), Positives = 155/285 (54%)
Query: 7 VVIDEAAQLKESESAIPLQLPCIQHAILVGDEVQLPAMVESSVSGEAYFGRSLFERLSYL 66
V+IDEAAQ E+ + IP+Q C + +LVGD QLPA + S ++ + + +SLF+RL
Sbjct: 588 VIIDEAAQAVETSTLIPIQHGC-KKVVLVGDPKQLPATIISPLAIKYKYDQSLFQRLQEK 646
Query: 67 GHPKHLLSMQYRMHPSISFFPNSYFYENKIRDAPTVRKRSYEKRFLPGPMYGPYSFINVF 126
P H+L+ QYRMH I FP+ +FY++ + D P + R+ + P +GP F ++
Sbjct: 647 NSP-HMLTTQYRMHSLIRAFPSRHFYQDLLLDGPNIPSRA--THYHSNPFFGPLVFYDLS 703
Query: 127 -------GGREEFIEHSCRNMVEVSVVMKILRNLYKAWVESKEKLSIGIVSPYSAQVIAI 179
GG F EH C+ + M + + K + + IGI+SPY QV+A+
Sbjct: 704 WSTETKPGGGSVFNEHECK------MAMYLFQLFTKVYPDEDFASRIGIISPYRQQVLAL 757
Query: 180 QEKLGSKYEKIAGFAVKVKSIDGFQGGEEDIIIISTVRS--NNTGSIGFASTPQRINVAL 237
+E ++ G + + ++DGFQG E +III S VR+ IGF S +R+NVAL
Sbjct: 758 REI----FKNYPG--ISIDTVDGFQGREREIIIFSCVRAPVEEGAGIGFLSDVRRMNVAL 811
Query: 238 TRARHCLWILGSERTLNHSESVWESLLDDAKARQCFFNIDEDKDL 282
TR R L ILG+ + L+ ++ W L+ + Q + +D+ L
Sbjct: 812 TRPRSSLLILGNTKALSINKD-WNELIQHTQNNQQLIPVTKDQPL 855
Score = 40 (19.1 bits), Expect = 1.6e-30, Sum P(2) = 1.6e-30
Identities = 18/75 (24%), Positives = 35/75 (46%)
Query: 980 ELFDIGLQYINYWKQHVDTDVGLVRRSKEINKVEQDFLQSCALHYYQLNDKKSMMKFVKA 1039
EL + G Q + K + ++ L ++ K+I K ++ + + NDKK +K K
Sbjct: 870 ELSEKGQQIV-IPKPRTEEEINL-QKQKDIEKRKKQHKRQ--KQKSKENDKKKQLKKRKE 925
Query: 1040 FHSMDLMRNFLKSKS 1054
++ D N +S +
Sbjct: 926 LNNNDNNNNNKESSN 940
>UNIPROTKB|E1BQD2 [details] [associations]
symbol:C4H4orf21 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR010666 Pfam:PF06839 GO:GO:0008270
GeneTree:ENSGT00550000074391 OMA:HKLGTNK EMBL:AADN02009328
IPI:IPI00577016 Ensembl:ENSGALT00000019715 Uniprot:E1BQD2
Length = 913
Score = 359 (131.4 bits), Expect = 1.2e-28, P = 1.2e-28
Identities = 95/277 (34%), Positives = 160/277 (57%)
Query: 1 MEQLKF--VVIDEAAQLKESESAIPL-QLPCIQHAILVGDEVQLPAMVESSVS-GEAYFG 56
++ LKF VV+DE +Q+ E S +P+ + C + +LVGD QLP ++ S S E
Sbjct: 616 LDTLKFPVVVLDECSQMTEPTSLLPIARFQC-EKLVLVGDPKQLPPTIQGSESIHEKGLE 674
Query: 57 RSLFERLSYLGHPKHLLSMQYRMHPSISFFPNSYFYENKIRDAPTVRKRSYEKRFLPGPM 116
++LF+RL +GH LL QYR HP+IS N FYE + D + ++RS +LP
Sbjct: 675 QTLFDRLCLMGHKTILLRTQYRCHPAISAIANELFYEGNLIDGVSEKERSPLLDWLPTLC 734
Query: 117 YGPYSFINVFGGREEFI-EHSCRNMVEVSVVMKILRNLYKAWVESKEKLSIGIVSPYSAQ 175
+ YS +N G E+ ++S NM EV +K ++ L + ++ ++G+++ Y +Q
Sbjct: 735 F--YS-VN---GLEQIERDNSFYNMAEVHFTVKFIQALIASGIDGS---AVGVITFYKSQ 785
Query: 176 VIAIQEKLGSKY-EKIAGFAVKVKSIDGFQGGEEDIIIISTVRSNNTGSIGFASTPQRIN 234
+ +Q L S + E AV+V ++D FQG E++I+++S VR+ TG F + +R+N
Sbjct: 786 MYKLQNLLRSIHSEAFPVKAVQVSTVDAFQGAEKEIVVLSCVRTRQTG---FTDSEKRMN 842
Query: 235 VALTRARHCLWILGSERTLNHSESVWESLLDDAKARQ 271
VALTRA+ L I+G+ L+ + ++E +++ K R+
Sbjct: 843 VALTRAKRHLLIVGNLACLSKNR-LYERVINHCKGRE 878
>DICTYBASE|DDB_G0288923 [details] [associations]
symbol:upf1 "regulator of nonsense transcripts 1"
species:44689 "Dictyostelium discoideum" [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA;ISS]
[GO:0005524 "ATP binding" evidence=IEA;IC] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0000184 "nuclear-transcribed mRNA catabolic process,
nonsense-mediated decay" evidence=IEA;ISS] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0003676
"nucleic acid binding" evidence=ISS] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR018999 Pfam:PF09416 dictyBase:DDB_G0288923
GO:GO:0005524 GO:GO:0005737 GO:GO:0000184 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 EMBL:AAFI02000126
GenomeReviews:CM000154_GR GO:GO:0003676 eggNOG:COG1112
GO:GO:0004004 KO:K14326 RefSeq:XP_636490.1
ProteinModelPortal:Q54I89 SMR:Q54I89 STRING:Q54I89
EnsemblProtists:DDB0233746 GeneID:8626873 KEGG:ddi:DDB_G0288923
InParanoid:Q54I89 Uniprot:Q54I89
Length = 1331
Score = 371 (135.7 bits), Expect = 7.6e-28, Sum P(2) = 7.6e-28
Identities = 103/276 (37%), Positives = 150/276 (54%)
Query: 1 MEQLKF--VVIDEAAQLKESESAIPLQLPCIQHAILVGDEVQL-PAMVESSVSGEAYFGR 57
+ Q +F ++IDE+ Q E E IPL + Q ILVGD QL P ++ V +A +
Sbjct: 695 LSQFRFPHILIDESTQASEPECLIPLMMGAKQ-VILVGDHRQLGPVLLCKKVV-DAGLSQ 752
Query: 58 SLFERLSYLGHPKHLLSMQYRMHPSISFFPNSYFYENKIRDAPTVRKRSYEKRFLPGPM- 116
SLFERL LGH L++QYRMHPS++ FP++ YE ++ + R + +F P P
Sbjct: 753 SLFERLISLGHHPERLTIQYRMHPSLTEFPSNTSYEGQLVSELSHTDRDSQSKF-PWPQP 811
Query: 117 YGPYSFINVFGGRE-EFIEHSCRNMVEVSVVMKILRNLYKAWVESKEKLSIGIVSPYSAQ 175
P F N G E S N E S+ KI+ + + IGI++PY Q
Sbjct: 812 KDPMFFFNCTGSEEISSSGTSFINTTEASICEKIVTKFLELGSLPGQ---IGIITPYEGQ 868
Query: 176 ---VIAIQEKLGSKYEKIAGFAVKVKSIDGFQGGEEDIIIISTVRSNNTGSIGFASTPQR 232
+ + +K G ++ +++V S+D FQG E+D II+S VRSN+ IGF P+R
Sbjct: 869 RAYITSHMQKSGKLNLELYK-SIEVASVDSFQGREKDYIILSCVRSNDYQGIGFLQDPRR 927
Query: 233 INVALTRARHCLWILGSERTLNHSESVWESLLDDAK 268
+NVALTRAR L ILG+ + L+ + +W SL+ K
Sbjct: 928 LNVALTRARFGLIILGNAKVLS-KDPLWNSLISHFK 962
Score = 41 (19.5 bits), Expect = 7.6e-28, Sum P(2) = 7.6e-28
Identities = 5/13 (38%), Positives = 11/13 (84%)
Query: 990 NYWKQHVDTDVGL 1002
NY ++H+D ++G+
Sbjct: 1005 NYDREHIDPNIGM 1017
>UNIPROTKB|F1PHA4 [details] [associations]
symbol:SETX "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006302 "double-strand break repair"
evidence=IEA] InterPro:IPR026121 GO:GO:0006302
GeneTree:ENSGT00580000081652 OMA:RLINHFE PANTHER:PTHR10887:SF15
EMBL:AAEX03006816 EMBL:AAEX03006817 Ensembl:ENSCAFT00000031656
Uniprot:F1PHA4
Length = 2531
Score = 353 (129.3 bits), Expect = 2.5e-27, P = 2.5e-27
Identities = 99/276 (35%), Positives = 152/276 (55%)
Query: 7 VVIDEAAQLKESESAIPLQLPCIQHAILVGDEVQLPAMVESSVSGEAYFGRSLFERL--- 63
V++DEA Q E E+ PL C ILVGD QLP V S + E + +S+ R
Sbjct: 2201 VIVDEAGQSCEVETLTPLIHRC-NKLILVGDPKQLPPTVISMKAQEYGYDQSMMARFYKL 2259
Query: 64 -------SYLGH-PKHLLSMQYRMHPSISFFPNSYFYENKIRDAPTVRKRSYEKRFLPGP 115
+ +G P L++QYRMHP I FP++Y Y ++ T R+ + P
Sbjct: 2260 LEDNVEHNMIGRLPVLQLTVQYRMHPDICLFPSNYVYNRSLK---TNRQTETNRCSSDWP 2316
Query: 116 MYGPYSFINVFGGREEFIEHSCRNMVEVSVVMKILRNLYKAWVESKEKLSIGIVSPYSAQ 175
+ PY +V G E S N+ E+ +VM+I++ L K +IGI++ Y AQ
Sbjct: 2317 -FQPYLVFDVGDGSERRDNDSYVNVQEIKLVMEIIK-LIKDKRRDVTFRNIGIITHYKAQ 2374
Query: 176 VIAIQEKLGSKYEKIAGFAVKVKSIDGFQGGEEDIIIISTVRSNNT-GSIGFASTPQRIN 234
IQ+ L ++++ G A +V ++DGFQG ++D +I++ VR+N GSIGF ++ QR+N
Sbjct: 2375 KTMIQKDLDKEFDR-KGPA-EVDTVDGFQGRQKDCVIVTCVRANAMQGSIGFLASLQRLN 2432
Query: 235 VALTRARHCLWILGSERTLNHSESVWESLLDDAKAR 270
V +TRA++ L+ILG RTL ++ W L+ DA+ R
Sbjct: 2433 VTITRAKYSLFILGHLRTLMENQH-WNHLIQDAQKR 2467
>POMBASE|SPAC16C9.06c [details] [associations]
symbol:upf1 "ATP-dependent RNA helicase Upf1"
species:4896 "Schizosaccharomyces pombe" [GO:0000184
"nuclear-transcribed mRNA catabolic process, nonsense-mediated
decay" evidence=ISO] [GO:0002184 "cytoplasmic translational
termination" evidence=NAS] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISO]
[GO:0005524 "ATP binding" evidence=IC] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005829 "cytosol" evidence=IDA] [GO:0006415
"translational termination" evidence=ISO] [GO:0008270 "zinc ion
binding" evidence=IEA] InterPro:IPR003593 InterPro:IPR018999
Pfam:PF09416 SMART:SM00382 PomBase:SPAC16C9.06c GO:GO:0005829
GO:GO:0005524 EMBL:CU329670 GO:GO:0000184 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 eggNOG:COG1112 InterPro:IPR014001
SMART:SM00487 GO:GO:0004004 GO:GO:0002184 HOGENOM:HOG000205990
KO:K14326 OMA:MFYEGSL OrthoDB:EOG405W86 PIR:S62476
RefSeq:NP_593080.1 ProteinModelPortal:Q09820 SMR:Q09820
STRING:Q09820 PRIDE:Q09820 EnsemblFungi:SPAC16C9.06c.1
GeneID:2542327 KEGG:spo:SPAC16C9.06c NextBio:20803388
Uniprot:Q09820
Length = 925
Score = 364 (133.2 bits), Expect = 3.0e-27, Sum P(2) = 3.0e-27
Identities = 99/265 (37%), Positives = 146/265 (55%)
Query: 3 QLKFVVIDEAAQLKESESAIPLQLPCIQHAILVGDEVQLPAMVESSVSGEAYFGRSLFER 62
+ + V+IDEA Q E E IPL L Q +LVGD QL +V + A +SLFER
Sbjct: 557 KFRSVLIDEATQASEPECMIPLVLGAKQ-VVLVGDHQQLGPVVMNKKVALASLSQSLFER 615
Query: 63 LSYLGHPKHLLSMQYRMHPSISFFPNSYFYENKIRDAPTVRKRSYEKRFLPGPMYGPYSF 122
L LG+ L +QYRMHP +S FP++ FYE +++ T +R R + P P S
Sbjct: 616 LIILGNSPFRLVVQYRMHPCLSEFPSNTFYEGTLQNGVTTSERI--ARHVDFPWIQPDSP 673
Query: 123 INVFG--GREEFIEH--SCRNMVEVSVVMKILRNLYKAWVESKEKLSIGIVSPYSAQ--- 175
+ + G+EE S N E S KI+ ++ V ++ IGIV+PY Q
Sbjct: 674 LMFYANFGQEELSASGTSFLNRTEASTCEKIVTTFLRSNVLPEQ---IGIVTPYDGQRSY 730
Query: 176 VIAIQEKLGSKYEKIAGFAVKVKSIDGFQGGEEDIIIISTVRSNNTGSIGFASTPQRINV 235
++ + GS + + AV+V S+D FQG E+D II+S VRS+ IGF + P+R+NV
Sbjct: 731 IVQYMQNNGSMQKDLYK-AVEVASVDAFQGREKDFIILSCVRSSEHQGIGFVNDPRRLNV 789
Query: 236 ALTRARHCLWILGSERTLNHSESVW 260
ALTRA++ + +LG+ + L ++W
Sbjct: 790 ALTRAKYGVIVLGNPKVLA-KHALW 813
Score = 37 (18.1 bits), Expect = 3.0e-27, Sum P(2) = 3.0e-27
Identities = 6/12 (50%), Positives = 10/12 (83%)
Query: 1845 GEDKSRWDEAAR 1856
G+D+S++DE R
Sbjct: 913 GDDESKFDEPTR 924
>UNIPROTKB|E1BAS6 [details] [associations]
symbol:SETX "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0007623 "circadian rhythm" evidence=IEA] [GO:0006369
"termination of RNA polymerase II transcription" evidence=IEA]
[GO:0006302 "double-strand break repair" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005654 "nucleoplasm" evidence=IEA]
InterPro:IPR026121 GO:GO:0005737 GO:GO:0005654 GO:GO:0006302
GeneTree:ENSGT00580000081652 OMA:RLINHFE PANTHER:PTHR10887:SF15
EMBL:DAAA02032276 EMBL:DAAA02032274 EMBL:DAAA02032275
IPI:IPI00842535 Ensembl:ENSBTAT00000042924 Uniprot:E1BAS6
Length = 2662
Score = 350 (128.3 bits), Expect = 5.5e-27, P = 5.5e-27
Identities = 101/277 (36%), Positives = 154/277 (55%)
Query: 7 VVIDEAAQLKESESAIPLQLPCIQHAILVGDEVQLPAMVESSVSGEAY-FGRSL---FER 62
V++DEA Q E E+ PL C +LVGD QLP V SV + Y + +S+ F +
Sbjct: 2168 VIVDEAGQSCEVETLTPLIHRC-NKLVLVGDPKQLPPTV-ISVKAQDYGYDQSMMARFHK 2225
Query: 63 L-------SYLGH-PKHLLSMQYRMHPSISFFPNSYFYENKIRDAPTVRKRSYEKRFLPG 114
L + +G P L++QYRMHP I FP+SY Y+ +R T R +
Sbjct: 2226 LLEESVEHNMIGRLPVLQLTIQYRMHPDICLFPSSYIYDGILR---TNRGTETSRCSSDW 2282
Query: 115 PMYGPYSFINVFGGREEFIEHSCRNMVEVSVVMKILRNLYKAWVESKEKLSIGIVSPYSA 174
P + PY +V G E S N+ E+ +VM++++ L K +IGI++ Y A
Sbjct: 2283 P-FQPYLVFDVGDGLERRDNDSYVNVQEIKLVMELIK-LIKDKRRDVTFRNIGIITHYKA 2340
Query: 175 QVIAIQEKLGSKYEKIAGFAVKVKSIDGFQGGEEDIIIISTVRSNNT-GSIGFASTPQRI 233
Q IQ+ L ++++ G A +V ++D FQG ++D +I++ VR+N T GSIGF ++ QR+
Sbjct: 2341 QKTMIQKDLDKEFDR-KG-AAEVDTVDAFQGRQKDCVIVTCVRANATQGSIGFLASLQRL 2398
Query: 234 NVALTRARHCLWILGSERTLNHSESVWESLLDDAKAR 270
NV +TRA++ L+ILG RTL + W L+ DA+ R
Sbjct: 2399 NVTITRAKYSLFILGHLRTLVENRH-WYHLIQDAQKR 2434
>UNIPROTKB|Q7Z333 [details] [associations]
symbol:SETX "Probable helicase senataxin" species:9606
"Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008219
"cell death" evidence=IEA] [GO:0006369 "termination of RNA
polymerase II transcription" evidence=IEA] [GO:0007623 "circadian
rhythm" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IC] [GO:0003678 "DNA helicase
activity" evidence=TAS] [GO:0006396 "RNA processing" evidence=TAS]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005654 "nucleoplasm"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0006302
"double-strand break repair" evidence=IDA] [GO:0032508 "DNA duplex
unwinding" evidence=TAS] InterPro:IPR026121 GO:GO:0005524
GO:GO:0005737 GO:GO:0005654 GO:GO:0005730 GO:GO:0003677
GO:GO:0008219 GO:GO:0006396 GO:GO:0006302 Orphanet:803
eggNOG:COG1112 GO:GO:0003678 KO:K10706 EMBL:AL159997 Orphanet:64753
EMBL:AY362728 EMBL:BX537849 EMBL:BX538166 EMBL:CR749249
EMBL:AL353701 EMBL:BC032600 EMBL:BC032622 EMBL:BC078166
EMBL:BC106017 EMBL:BC137350 EMBL:AB014525 EMBL:AK001456
EMBL:AK022902 IPI:IPI00142538 IPI:IPI00646645 IPI:IPI00719643
RefSeq:NP_055861.3 UniGene:Hs.460317 ProteinModelPortal:Q7Z333
SMR:Q7Z333 IntAct:Q7Z333 STRING:Q7Z333 PhosphoSite:Q7Z333
DMDM:296453021 PaxDb:Q7Z333 PRIDE:Q7Z333 Ensembl:ENST00000224140
Ensembl:ENST00000372169 Ensembl:ENST00000393220
Ensembl:ENST00000436441 GeneID:23064 KEGG:hsa:23064 UCSC:uc004cbj.3
UCSC:uc004cbk.3 UCSC:uc010mzt.3 CTD:23064 GeneCards:GC09M135136
HGNC:HGNC:445 HPA:HPA024105 MIM:602433 MIM:606002 MIM:608465
neXtProt:NX_Q7Z333 PharmGKB:PA24751 HOVERGEN:HBG108476
InParanoid:Q7Z333 OMA:RLINHFE OrthoDB:EOG4XWFWX PhylomeDB:Q7Z333
ChiTaRS:SETX GenomeRNAi:23064 NextBio:44145 ArrayExpress:Q7Z333
Bgee:Q7Z333 Genevestigator:Q7Z333 GermOnline:ENSG00000107290
PANTHER:PTHR10887:SF15 Uniprot:Q7Z333
Length = 2677
Score = 348 (127.6 bits), Expect = 9.1e-27, P = 9.1e-27
Identities = 99/276 (35%), Positives = 152/276 (55%)
Query: 7 VVIDEAAQLKESESAIPLQLPCIQHAILVGDEVQLPAMVESSVSGEAYFGRSLFERLSYL 66
V++DEA Q E E+ PL C ILVGD QLP V S + E + +S+ R L
Sbjct: 2178 VIVDEAGQSCEIETLTPLIHRC-NKLILVGDPKQLPPTVISMKAQEYGYDQSMMARFCRL 2236
Query: 67 -----GH------PKHLLSMQYRMHPSISFFPNSYFYENKIRDAPTVRKRSYEKRFLPGP 115
H P L++QYRMHP I FP++Y Y ++ T R+ + P
Sbjct: 2237 LEENVEHNMISRLPILQLTVQYRMHPDICLFPSNYVYNRNLK---TNRQTEAIRCSSDWP 2293
Query: 116 MYGPYSFINVFGGREEFIEHSCRNMVEVSVVMKILRNLYKAWVESKEKLSIGIVSPYSAQ 175
+ PY +V G E S N+ E+ +VM+I++ L K + +IGI++ Y AQ
Sbjct: 2294 -FQPYLVFDVGDGSERRDNDSYINVQEIKLVMEIIK-LIKDKRKDVSFRNIGIITHYKAQ 2351
Query: 176 VIAIQEKLGSKYEKIAGFAVKVKSIDGFQGGEEDIIIISTVRSNNT-GSIGFASTPQRIN 234
IQ+ L ++++ G A +V ++D FQG ++D +I++ VR+N+ GSIGF ++ QR+N
Sbjct: 2352 KTMIQKDLDKEFDR-KGPA-EVDTVDAFQGRQKDCVIVTCVRANSIQGSIGFLASLQRLN 2409
Query: 235 VALTRARHCLWILGSERTLNHSESVWESLLDDAKAR 270
V +TRA++ L+ILG RTL ++ W L+ DA+ R
Sbjct: 2410 VTITRAKYSLFILGHLRTLMENQH-WNQLIQDAQKR 2444
>UNIPROTKB|F1S0U6 [details] [associations]
symbol:SETX "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0007623 "circadian rhythm" evidence=IEA] [GO:0006369
"termination of RNA polymerase II transcription" evidence=IEA]
[GO:0006302 "double-strand break repair" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005654 "nucleoplasm" evidence=IEA]
InterPro:IPR026121 GO:GO:0005737 GO:GO:0005654 GO:GO:0006302
KO:K10706 GeneTree:ENSGT00580000081652 CTD:23064 OMA:RLINHFE
PANTHER:PTHR10887:SF15 EMBL:CU550727 EMBL:CU914573
RefSeq:XP_003353743.1 UniGene:Ssc.45527 Ensembl:ENSSSCT00000006294
GeneID:100511239 KEGG:ssc:100511239 Uniprot:F1S0U6
Length = 2661
Score = 346 (126.9 bits), Expect = 1.5e-26, P = 1.5e-26
Identities = 95/276 (34%), Positives = 153/276 (55%)
Query: 7 VVIDEAAQLKESESAIPLQLPCIQHAILVGDEVQLPAMVESSVSGEAYFGRSLFERL--- 63
V++DEA Q E E+ PL C +LVGD QLP V S + + + +S+ R
Sbjct: 2172 VIVDEAGQSCEVETLTPLIHRC-NKLVLVGDPKQLPPTVISMKAQDYGYDQSMMARFYKL 2230
Query: 64 -------SYLGH-PKHLLSMQYRMHPSISFFPNSYFYENKIRDAPTVRKRSYEKRFLPGP 115
+ +G P L++QYRMHP I FP++Y Y ++ ++ + S P
Sbjct: 2231 LEENVEHNVIGRLPILQLTVQYRMHPDICLFPSNYIYNRNLK-TNSLTEASRCSSDWP-- 2287
Query: 116 MYGPYSFINVFGGREEFIEHSCRNMVEVSVVMKILRNLYKAWVESKEKLSIGIVSPYSAQ 175
+ PY +V G E S N+ E+ +VM+I++ L K +IGI++ Y AQ
Sbjct: 2288 -FQPYLVFDVGDGSERRDNDSYVNVQEIKLVMEIIK-LIKDKRRDVTFRNIGIITHYKAQ 2345
Query: 176 VIAIQEKLGSKYEKIAGFAVKVKSIDGFQGGEEDIIIISTVRSNNT-GSIGFASTPQRIN 234
IQ+ L ++++ G A +V ++DGFQG ++D +I++ VR+ + GSIGF ++ QR+N
Sbjct: 2346 KTLIQKDLDKEFDR-KGPA-EVDTVDGFQGRQKDCVIVTCVRAKTSQGSIGFLASLQRLN 2403
Query: 235 VALTRARHCLWILGSERTLNHSESVWESLLDDAKAR 270
V +TRA++ L+ILG RTL ++ W L++DA+ R
Sbjct: 2404 VTITRAKYSLFILGHLRTLRENDH-WNQLIEDAQKR 2438
>WB|WBGene00004880 [details] [associations]
symbol:smg-2 species:6239 "Caenorhabditis elegans"
[GO:0000184 "nuclear-transcribed mRNA catabolic process,
nonsense-mediated decay" evidence=IEA;IGI] [GO:0005737 "cytoplasm"
evidence=IEA;IDA;TAS] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016246 "RNA interference" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP] [GO:0030538
"embryonic genitalia morphogenesis" evidence=IMP] [GO:0005634
"nucleus" evidence=IDA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0051721 "protein phosphatase 2A
binding" evidence=IPI] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR003593 InterPro:IPR018999 Pfam:PF09416 SMART:SM00382
EMBL:AF074017 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0016246 GO:GO:0000184 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0003723 GO:GO:0040035 eggNOG:COG1112
GO:GO:0004004 GO:GO:0030538 HOGENOM:HOG000205990 KO:K14326
EMBL:FO081800 PIR:T43280 RefSeq:NP_490829.1
ProteinModelPortal:O76512 SMR:O76512 MINT:MINT-255670 STRING:O76512
PaxDb:O76512 GeneID:171696 KEGG:cel:CELE_Y48G8AL.6 UCSC:Y48G8AL.6
CTD:171696 WormBase:Y48G8AL.6 InParanoid:O76512 NextBio:872341
Uniprot:O76512
Length = 1069
Score = 339 (124.4 bits), Expect = 2.3e-26, P = 2.3e-26
Identities = 89/273 (32%), Positives = 145/273 (53%)
Query: 7 VVIDEAAQLKESESAIPLQLPCIQHAILVGDEVQLPAMVESSVSGEAYFGRSLFERLSYL 66
V+IDE+ Q E E + + + ++ +LVGD QL +V + A +SLFERL L
Sbjct: 607 VLIDESTQATEPEILVSI-MRGVRQLVLVGDHCQLGPVVICKKAAIAGLSQSLFERLVLL 665
Query: 67 GHPKHLLSMQYRMHPSISFFPNSYFYENKIRDAPTVRKRSYEKRFLPGPMYGPYSFINVF 126
G L +QYRMHP +S FP++ FY+ +++ T R P +F
Sbjct: 666 GIRPFRLQVQYRMHPVLSEFPSNVFYDGSLQNGVTENDRHMTGVDWHWPKPNKPAFFWHC 725
Query: 127 GGREEFIEH--SCRNMVEVSVVMKILRNLYKAWVESKEKLSIGIVSPYSAQ---VIAIQE 181
G EE S N E + V K++ L KA V+ + IG+++ Y Q ++
Sbjct: 726 SGSEELSASGTSFLNRTEAANVEKLVSKLIKAGVQPHQ---IGVITSYEGQRSFIVNYMH 782
Query: 182 KLGSKYEKIAGFAVKVKSIDGFQGGEEDIIIISTVRSNNTGSIGFASTPQRINVALTRAR 241
G+ K+ V++ S+D FQG E+D II++ VRSN+ IGF S P+R+NVA+TRA+
Sbjct: 783 TQGTLNSKLYE-NVEIASVDAFQGREKDYIIVTCVRSNDILGIGFLSDPRRLNVAITRAK 841
Query: 242 HCLWILGSERTLNHSESVWESLLDDAKARQCFF 274
+ L ++G+ + L + +W L++ K+++ +
Sbjct: 842 YGLVLVGNAKVLARHD-LWHELINHYKSKEMLY 873
>RGD|2322000 [details] [associations]
symbol:LOC100363957 "hypothetical protein LOC100363957"
species:10116 "Rattus norvegicus" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR010666 Pfam:PF06839 RGD:2322000
GO:GO:0008270 GeneTree:ENSGT00550000074391 IPI:IPI00777941
Ensembl:ENSRNOT00000014695 Uniprot:F1M404
Length = 919
Score = 354 (129.7 bits), Expect = 3.5e-26, Sum P(2) = 3.5e-26
Identities = 96/276 (34%), Positives = 149/276 (53%)
Query: 1 MEQLKF--VVIDEAAQLKESESAIPL-QLPCIQHAILVGDEVQLPAMVESSVSGEAY-FG 56
M LKF VV+DE +Q+ E S +P+ + C + ILVGD QLP ++ S +
Sbjct: 615 MNDLKFPVVVLDECSQMTEPASLLPIARFEC-EKLILVGDPKQLPPTIQGSDAAHGNGLE 673
Query: 57 RSLFERLSYLGHPKHLLSMQYRMHPSISFFPNSYFYENKIRDAPTVRKRSYEKRFLPGPM 116
++LF+RL +GH L QYR HP IS N FYE + + + R+RS +LP
Sbjct: 674 QTLFDRLCLMGHKPIQLRTQYRCHPVISAIANDLFYEGNLVNGISERERSPVLEWLP--- 730
Query: 117 YGPYSFINVFGGREEFIEHSCRNMVEVSVVMKILRNLYKAWVESKEKLSIGIVSPYSAQV 176
F NV G + E+S N+ E + +K++R+L + +E IG+++ Y +Q+
Sbjct: 731 --TLCFYNVTGTEQVERENSFVNVAEAAFTLKLIRSLIASGLEGS---MIGVITLYKSQM 785
Query: 177 IAIQEKLGS-KYEKIAGFAVKVKSIDGFQGGEEDIIIISTVRSNNTGSIGFASTPQRINV 235
I L + + AV+V ++D FQG E++III+S VR T +GF + +R+NV
Sbjct: 786 YKICSLLSAVDVDHPDVKAVEVSTVDAFQGAEKEIIILSCVR---TRQVGFIDSEKRMNV 842
Query: 236 ALTRARHCLWILGSERTLNHSESVWESLLDDAKARQ 271
ALTR R L I+GS L ++ +W ++ K R+
Sbjct: 843 ALTRGRRHLLIIGSLSCLRKNQ-LWGRVIQHCKGRE 877
Score = 37 (18.1 bits), Expect = 3.5e-26, Sum P(2) = 3.5e-26
Identities = 11/40 (27%), Positives = 20/40 (50%)
Query: 578 EEGLGGSERCILRQLFVTKFVLESRNTRNVERQEKGQLSD 617
E+GL + +C + + K LE + ++ EK +L D
Sbjct: 877 EDGLQHASQCEPQLDRLLKEYLEKQAEEKQKKTEKEKLKD 916
>UNIPROTKB|E1BG37 [details] [associations]
symbol:E1BG37 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR010666 Pfam:PF06839 GO:GO:0008270
GeneTree:ENSGT00550000074391 EMBL:DAAA02016483 IPI:IPI00912094
Ensembl:ENSBTAT00000017567 OMA:HKLGTNK Uniprot:E1BG37
Length = 933
Score = 336 (123.3 bits), Expect = 3.7e-26, P = 3.7e-26
Identities = 91/276 (32%), Positives = 149/276 (53%)
Query: 1 MEQLKF--VVIDEAAQLKESESAIPL-QLPCIQHAILVGDEVQLPAMVESS-VSGEAYFG 56
M LKF VV+DE +Q+ E S +P+ + C + ILVGD QLP ++ S + E
Sbjct: 621 MNDLKFPVVVLDECSQMTEPASLLPIARFEC-EKLILVGDPKQLPPTIQGSDAAHENGLE 679
Query: 57 RSLFERLSYLGHPKHLLSMQYRMHPSISFFPNSYFYENKIRDAPTVRKRSYEKRFLPGPM 116
++LF+RL +GH LL QYR HP+IS N FYE + + + +RS +LP
Sbjct: 680 QTLFDRLCLMGHKPILLRTQYRCHPTISAIANDLFYEGNLMNGISETERSPLLEWLP--- 736
Query: 117 YGPYSFINVFGGREEFIEHSCRNMVEVSVVMKILRNLYKAWVESKEKLSIGIVSPYSAQV 176
F NV G + +S N+ E + +K++++L + + IG+++ Y +Q+
Sbjct: 737 --TLCFYNVKGLEQIERGNSFHNVAEAAFTLKLIQSLIASGIAGS---MIGVITLYKSQM 791
Query: 177 IAIQEKLGSK-YEKIAGFAVKVKSIDGFQGGEEDIIIISTVRSNNTGSIGFASTPQRINV 235
+ L + ++ AV+V ++D FQG E++III+S VR T +GF + +R+NV
Sbjct: 792 YKLCHLLSAMDFDHPNLKAVQVSTVDAFQGAEKEIIILSCVR---TRQVGFIDSEKRMNV 848
Query: 236 ALTRARHCLWILGSERTLNHSESVWESLLDDAKARQ 271
ALTR R L I+G+ L + +W ++ + R+
Sbjct: 849 ALTRGRRHLLIVGNLACLRKNR-LWGRVIQHCEGRE 883
>UNIPROTKB|D4AEB3 [details] [associations]
symbol:Setx "Protein Setx" species:10116 "Rattus
norvegicus" [GO:0005654 "nucleoplasm" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006302 "double-strand break repair"
evidence=IEA] [GO:0006369 "termination of RNA polymerase II
transcription" evidence=IEA] [GO:0007623 "circadian rhythm"
evidence=IEA] InterPro:IPR026121 RGD:1565575 GO:GO:0005737
GO:GO:0005654 GO:GO:0006302 KO:K10706 GeneTree:ENSGT00580000081652
CTD:23064 OMA:RLINHFE OrthoDB:EOG4XWFWX PANTHER:PTHR10887:SF15
IPI:IPI00476851 RefSeq:XP_342401.3 ProteinModelPortal:D4AEB3
PRIDE:D4AEB3 Ensembl:ENSRNOT00000017984 GeneID:362096
KEGG:rno:362096 NextBio:678646 ArrayExpress:D4AEB3 Uniprot:D4AEB3
Length = 2647
Score = 341 (125.1 bits), Expect = 5.0e-26, P = 5.0e-26
Identities = 98/276 (35%), Positives = 152/276 (55%)
Query: 7 VVIDEAAQLKESESAIPLQLPCIQHAILVGDEVQLPAMVESSVSGEAYFGRSLFERL--- 63
V++DEA Q E E+ PL C +LVGD QLP V S + E + +S+ R
Sbjct: 2155 VIVDEAGQSCEVETLSPLIHRC-NKLVLVGDPKQLPPTVISMKAQEYGYDQSMMARFCKL 2213
Query: 64 -------SYLGH-PKHLLSMQYRMHPSISFFPNSYFYENKIRDAPTVRKRSYEKRFLPGP 115
+ +G P L++QYRMHP I FP++Y Y ++ T R + P
Sbjct: 2214 LEENVEQNMIGRLPVLQLTIQYRMHPDICLFPSNYVYNKNLK---TNRLTETIRCSSEWP 2270
Query: 116 MYGPYSFINVFGGREEFIEHSCRNMVEVSVVMKILRNLYKAWVESKEKLSIGIVSPYSAQ 175
+ PY +V G E+ S N+ E+ +VM+I++ L K + +IGI++ Y AQ
Sbjct: 2271 -FQPYLVFDVGDGSEQRDNDSYINVQEIKLVMEIIK-LIKEKRKDISFRNIGIITHYKAQ 2328
Query: 176 VIAIQEKLGSKYEKIAGFAVKVKSIDGFQGGEEDIIIISTVRSNNT-GSIGFASTPQRIN 234
IQ+ L +++K G A +V ++D FQG ++D II++ VR++ GSIGF ++ QR+N
Sbjct: 2329 KTMIQKDLEKEFDK-KGPA-EVDTVDAFQGRQKDCIIVTCVRASAVQGSIGFLASLQRLN 2386
Query: 235 VALTRARHCLWILGSERTLNHSESVWESLLDDAKAR 270
V +TRA++ L+ILG RTL ++ W L+ DA+ R
Sbjct: 2387 VTITRAKYSLFILGHLRTLMENQH-WYELIQDAQKR 2421
>MGI|MGI:2443480 [details] [associations]
symbol:Setx "senataxin" species:10090 "Mus musculus"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO] [GO:0005654 "nucleoplasm" evidence=ISO]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006302 "double-strand break repair"
evidence=ISO] [GO:0006369 "termination of RNA polymerase II
transcription" evidence=IMP] [GO:0006974 "response to DNA damage
stimulus" evidence=IEA] [GO:0007623 "circadian rhythm"
evidence=IMP] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR026121 MGI:MGI:2443480 GO:GO:0005524 GO:GO:0005737
GO:GO:0005654 GO:GO:0005730 GO:GO:0007623 GO:GO:0006302
GO:GO:0004386 eggNOG:COG1112 GO:GO:0006369 KO:K10706 EMBL:AL772379
GeneTree:ENSGT00580000081652 CTD:23064 HOVERGEN:HBG108476
OrthoDB:EOG4XWFWX PANTHER:PTHR10887:SF15 EMBL:AL845267
EMBL:AK044730 EMBL:AK048354 EMBL:AK077911 EMBL:BC046382
EMBL:BC058109 EMBL:BC079604 EMBL:AK129177 EMBL:BK001523
IPI:IPI00421108 IPI:IPI00626271 RefSeq:NP_932150.2 UniGene:Mm.41867
ProteinModelPortal:A2AKX3 SMR:A2AKX3 DIP:DIP-56995N IntAct:A2AKX3
STRING:A2AKX3 PhosphoSite:A2AKX3 PaxDb:A2AKX3 PRIDE:A2AKX3
Ensembl:ENSMUST00000061578 Ensembl:ENSMUST00000129544 GeneID:269254
KEGG:mmu:269254 UCSC:uc008izm.1 InParanoid:A2AKX3 NextBio:392760
Bgee:A2AKX3 CleanEx:MM_SETX Genevestigator:A2AKX3 Uniprot:A2AKX3
Length = 2646
Score = 340 (124.7 bits), Expect = 6.4e-26, P = 6.4e-26
Identities = 99/276 (35%), Positives = 151/276 (54%)
Query: 7 VVIDEAAQLKESESAIPLQLPCIQHAILVGDEVQLPAMVESSVSGEAYFGRSLFERL--- 63
V++DEA Q E E+ PL C ILVGD QLP V S + E + +S+ R
Sbjct: 2154 VIVDEAGQSCEVETLSPLIHRC-NKLILVGDPKQLPPTVISMKAQEYGYDQSMMARFCKL 2212
Query: 64 -------SYLGH-PKHLLSMQYRMHPSISFFPNSYFYENKIRDAPTVRKRSYEKRFLPGP 115
+ +G P L++QYRMHP I FP++Y Y ++ T R + P
Sbjct: 2213 LEENVEQNMIGRLPVLQLTIQYRMHPDICLFPSNYVYNKNLK---TNRLTESIRCSSEWP 2269
Query: 116 MYGPYSFINVFGGREEFIEHSCRNMVEVSVVMKILRNLYKAWVESKEKLSIGIVSPYSAQ 175
+ PY +V G E S N+ E+ +VM+I++ L K + +IGI++ Y AQ
Sbjct: 2270 -FQPYLVFDVGDGSERRDNDSYINVQEIKLVMEIIK-LIKEKRKDISFRNIGIITHYKAQ 2327
Query: 176 VIAIQEKLGSKYEKIAGFAVKVKSIDGFQGGEEDIIIISTVRSNNT-GSIGFASTPQRIN 234
IQ+ L +++K G A +V ++D FQG ++D II++ VR++ GSIGF ++ QR+N
Sbjct: 2328 KTMIQKDLEKEFDK-KGPA-EVDTVDAFQGRQKDCIIVTCVRASAVQGSIGFLASLQRLN 2385
Query: 235 VALTRARHCLWILGSERTLNHSESVWESLLDDAKAR 270
V +TRA++ L+ILG RTL ++ W L+ DA+ R
Sbjct: 2386 VTITRAKYSLFILGHLRTLMENQH-WYELIQDAQKR 2420
>UNIPROTKB|Q6ZU11 [details] [associations]
symbol:Q6ZU11 "Uncharacterized protein FLJ44066"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
InterPro:IPR010666 Pfam:PF06839 GO:GO:0016021 GO:GO:0008270
eggNOG:COG1112 UniGene:Hs.713663 EMBL:AK126054 EMBL:AL137700
IPI:IPI00300207 IPI:IPI00880006 PIR:T46441 RefSeq:NP_060862.3
UniGene:Hs.380346 ProteinModelPortal:Q6ZU11 SMR:Q6ZU11
PhosphoSite:Q6ZU11 DMDM:74711848 PaxDb:Q6ZU11 PRIDE:Q6ZU11
GeneID:55345 KEGG:hsa:55345 CTD:55345 HPA:HPA030706
neXtProt:NX_Q6ZU11 PharmGKB:PA144596502 HOGENOM:HOG000155510
InParanoid:Q6ZU11 PhylomeDB:Q6ZU11 GenomeRNAi:55345 NextBio:59679
ArrayExpress:Q6ZU11 Bgee:Q6ZU11 Genevestigator:Q6ZU11
Uniprot:Q6ZU11
Length = 926
Score = 331 (121.6 bits), Expect = 1.3e-25, P = 1.3e-25
Identities = 89/276 (32%), Positives = 149/276 (53%)
Query: 1 MEQLKF--VVIDEAAQLKESESAIPL-QLPCIQHAILVGDEVQLPAMVESS-VSGEAYFG 56
M LKF VV+DE +Q+ E S +P+ + C + ILVGD QLP ++ S + E
Sbjct: 620 MNDLKFPVVVLDECSQITEPASLLPIARFEC-EKLILVGDPKQLPPTIQGSDAAHENGLE 678
Query: 57 RSLFERLSYLGHPKHLLSMQYRMHPSISFFPNSYFYENKIRDAPTVRKRSYEKRFLPGPM 116
++LF+RL +GH LL QYR HP+IS N FY+ + + T +RS +LP
Sbjct: 679 QTLFDRLCLMGHKPILLRTQYRCHPAISAIANDLFYKGALMNGVTEIERSPLLEWLP--- 735
Query: 117 YGPYSFINVFGGREEFIEHSCRNMVEVSVVMKILRNLYKAWVESKEKLSIGIVSPYSAQV 176
F NV G + ++S N+ E + +K++++L + + IG+++ Y +Q+
Sbjct: 736 --TLCFYNVKGLEQIERDNSFHNVAEATFTLKLIQSLIASGIAGS---MIGVITLYKSQM 790
Query: 177 IAIQEKLGS-KYEKIAGFAVKVKSIDGFQGGEEDIIIISTVRSNNTGSIGFASTPQRINV 235
+ L + + V+V ++D FQG E++III+S VR T +GF + +R+NV
Sbjct: 791 YKLCHLLSAVDFHHPDIKTVQVSTVDAFQGAEKEIIILSCVR---TRQVGFIDSEKRMNV 847
Query: 236 ALTRARHCLWILGSERTLNHSESVWESLLDDAKARQ 271
ALTR + L I+G+ L ++ +W ++ + R+
Sbjct: 848 ALTRGKRHLLIVGNLACLRKNQ-LWGRVIQHCEGRE 882
>UNIPROTKB|G5EA02 [details] [associations]
symbol:C4orf21 "Uncharacterized protein C4orf21"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR010666 Pfam:PF06839 GO:GO:0008270
EMBL:CH471057 InterPro:IPR018838 Pfam:PF10382 UniGene:Hs.713663
RefSeq:NP_060862.3 UniGene:Hs.380346 GeneID:55345 KEGG:hsa:55345
CTD:55345 GenomeRNAi:55345 NextBio:59679 EMBL:AC106864
EMBL:AC023886 PRIDE:G5EA02 Ensembl:ENST00000505019 HGNC:HGNC:25654
OMA:NTYESSG ArrayExpress:G5EA02 Bgee:G5EA02 Uniprot:G5EA02
Length = 2104
Score = 331 (121.6 bits), Expect = 4.4e-25, P = 4.4e-25
Identities = 89/276 (32%), Positives = 149/276 (53%)
Query: 1 MEQLKF--VVIDEAAQLKESESAIPL-QLPCIQHAILVGDEVQLPAMVESS-VSGEAYFG 56
M LKF VV+DE +Q+ E S +P+ + C + ILVGD QLP ++ S + E
Sbjct: 1798 MNDLKFPVVVLDECSQITEPASLLPIARFEC-EKLILVGDPKQLPPTIQGSDAAHENGLE 1856
Query: 57 RSLFERLSYLGHPKHLLSMQYRMHPSISFFPNSYFYENKIRDAPTVRKRSYEKRFLPGPM 116
++LF+RL +GH LL QYR HP+IS N FY+ + + T +RS +LP
Sbjct: 1857 QTLFDRLCLMGHKPILLRTQYRCHPAISAIANDLFYKGALMNGVTEIERSPLLEWLP--- 1913
Query: 117 YGPYSFINVFGGREEFIEHSCRNMVEVSVVMKILRNLYKAWVESKEKLSIGIVSPYSAQV 176
F NV G + ++S N+ E + +K++++L + + IG+++ Y +Q+
Sbjct: 1914 --TLCFYNVKGLEQIERDNSFHNVAEATFTLKLIQSLIASGIAGS---MIGVITLYKSQM 1968
Query: 177 IAIQEKLGS-KYEKIAGFAVKVKSIDGFQGGEEDIIIISTVRSNNTGSIGFASTPQRINV 235
+ L + + V+V ++D FQG E++III+S VR T +GF + +R+NV
Sbjct: 1969 YKLCHLLSAVDFHHPDIKTVQVSTVDAFQGAEKEIIILSCVR---TRQVGFIDSEKRMNV 2025
Query: 236 ALTRARHCLWILGSERTLNHSESVWESLLDDAKARQ 271
ALTR + L I+G+ L ++ +W ++ + R+
Sbjct: 2026 ALTRGKRHLLIVGNLACLRKNQ-LWGRVIQHCEGRE 2060
>UNIPROTKB|I3L717 [details] [associations]
symbol:LOC100514320 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0004003
"ATP-dependent DNA helicase activity" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA] InterPro:IPR000212 InterPro:IPR014016
Pfam:PF00580 GO:GO:0005524 GO:GO:0003677 GO:GO:0004003
PANTHER:PTHR11070 GeneTree:ENSGT00620000088104 EMBL:CU856332
Ensembl:ENSSSCT00000031166 OMA:STHEECA Uniprot:I3L717
Length = 827
Score = 248 (92.4 bits), Expect = 4.6e-25, Sum P(2) = 4.6e-25
Identities = 60/148 (40%), Positives = 89/148 (60%)
Query: 597 FVLESRNTRNVERQEKGQLSDIFNLSQNFRTHVGVLNLAQSVIELLYRFFPHSVDILKPE 656
F S+NT + + + + I L QN+R+H G+L+LA V++LL +FP S D L +
Sbjct: 656 FHYASKNTGDKQCAVR-KPKKIHQLYQNYRSHSGILSLASGVVDLLQYYFPESFDRLPRD 714
Query: 657 TSLIYGEPPVLLESGNDENAIIKIFGNSGDAGGNMVGFGAEQVILVRDDCVRKEISNYVG 716
+ L G P++LES + + I + GN + FGA QVILV ++ +++I +G
Sbjct: 715 SGLFDGPRPIVLESCSVSDLAILLRGNKRKT--QPIEFGAHQVILVANEMAKEKIPEELG 772
Query: 717 KQALVLTIVESKGLEFQDVLLYDFFGSS 744
ALVLT+ E+KGLEF DVLLY+FF S
Sbjct: 773 L-ALVLTVYEAKGLEFDDVLLYNFFTDS 799
Score = 134 (52.2 bits), Expect = 4.6e-25, Sum P(2) = 4.6e-25
Identities = 57/209 (27%), Positives = 97/209 (46%)
Query: 390 YIQVLKVWDILPLEDVQKLVTRLDNIFVKYTDEFINLCKEKCFEGNL--EVPKTWAVTSN 447
Y +++++WDI+ D KL + I Y + ++K +G+ +V +
Sbjct: 104 YTEIIRIWDIVL--DHDKLKDSIRAICGAYNRGLSCILRKK-LKGDHKGQVSANMKIQKR 160
Query: 448 IVRFKNLADNESGSDMSGAASDCRSYVENSNVTDSLLLMKFYPLSSGIVSHLLSDRDGRE 507
I R + D E+ D SGA + + S V +MKF+ S+ + S++L+D
Sbjct: 161 IPRCY-VEDTEA--DQSGAYMEPEYFPPASAVETEYNIMKFHSFSTSMASNILNDTT-TT 216
Query: 508 LDLPFEVTDEQLEMI-LFPRST---FILGRSGTGKTTILTMKLFQNEKHHRMAKEQFDGV 563
++ PF V + + +I L PR ++GRSGTGKTT +L++ K H + E+
Sbjct: 217 VEYPFRVGELEYAVIDLNPRPLEPIILIGRSGTGKTTCCLYRLWK--KFH-VYWEKAQQA 273
Query: 564 NNSLTLHTSW---EVEAEEGL---GGSER 586
+ L W +E E G GG E+
Sbjct: 274 GSPLLARQIWLKRRLELEPGKEVPGGEEK 302
Score = 50 (22.7 bits), Expect = 0.00031, Sum P(2) = 0.00031
Identities = 16/57 (28%), Positives = 26/57 (45%)
Query: 1916 LETGVASAGNVNVENTDSNADECSGSHEGKIIPTSATSASEA--QGSSQKPVSNRAG 1970
LE G G E + +E GS E +I+ + SEA +G++ +P + G
Sbjct: 290 LEPGKEVPGGEEKEEEEEEEEEEEGSIEVEIVHSDEEQESEACAEGANGEPEAPSQG 346
Score = 37 (18.1 bits), Expect = 6.0e-15, Sum P(2) = 6.0e-15
Identities = 8/21 (38%), Positives = 13/21 (61%)
Query: 142 EVSVVMKILRNLYKAWVESKE 162
+VS MKI + + + +VE E
Sbjct: 150 QVSANMKIQKRIPRCYVEDTE 170
>GENEDB_PFALCIPARUM|MAL7P1.12 [details] [associations]
symbol:MAL7P1.12 "erythrocyte
membrane-associated antigen" species:5833 "Plasmodium falciparum"
[GO:0016020 "membrane" evidence=ISS] GO:GO:0016020
InterPro:IPR014001 SMART:SM00487 EMBL:AL844506
RefSeq:XP_001348968.1 ProteinModelPortal:Q8IC35 IntAct:Q8IC35
MINT:MINT-1611439 EnsemblProtists:MAL7P1.12:mRNA GeneID:2655186
KEGG:pfa:MAL7P1.12 EuPathDB:PlasmoDB:PF3D7_0703500
HOGENOM:HOG000283891 ProtClustDB:CLSZ2433351 Uniprot:Q8IC35
Length = 2283
Score = 351 (128.6 bits), Expect = 5.8e-25, Sum P(2) = 5.8e-25
Identities = 95/288 (32%), Positives = 153/288 (53%)
Query: 2 EQLKFVVIDEAAQLKESESAIPLQLPCIQHAILVGDEVQLPAMVESSVSGEAYFGRSLFE 61
E+ + V+IDE AQ E + IPL C + +L+GD QLP + S + + +SL E
Sbjct: 1918 EKFERVIIDECAQSIEPSNLIPLGHYC-NNLVLIGDHKQLPPTIISPDAIKLGLDKSLLE 1976
Query: 62 RLSYLG-HPKHLLSMQYRMHPSISFFPNSYFYENKIRDAP-TVRKRSYEKRFL-PGPMYG 118
R P HLL+ Q RMH SI FPN +FY+NK++ A T R K FL P P
Sbjct: 1977 RFVMAKIAPVHLLNTQRRMHLSICVFPNFHFYDNKLKTANVTEENRPIIKGFLWPNPKCR 2036
Query: 119 PYSFINVFGGR-----EEFIEHSCRNMVEVSVVMKILRNLYKAWVESKEKLSIGIVSPYS 173
+FI+V G+ E S N+ E+ ++ +L+++ S ++ IGI++ Y
Sbjct: 2037 -LAFIDVSIGKPGSKFENAYGTSKFNLYEIEPLITVLKSIINEGCVSVDE--IGILTAYD 2093
Query: 174 AQVIAIQEKLGSKYEKIAGFAVKVKSIDGFQGGEEDIIIISTVRSNNTGSIGFASTPQRI 233
AQ + +++ + + A +++ SIDGFQG E+D+I+ S VRSN +GF +R+
Sbjct: 2094 AQKMKLKKAVQDAFSYEASHRIEIDSIDGFQGKEKDLILFSAVRSNANNELGFLRDARRL 2153
Query: 234 NVALTRARHCLWILGSERTLNHSESVWESLLDDAKARQCFFNIDEDKD 281
NV LTRA+ + + G + TL + + W L +++ ++ + D
Sbjct: 2154 NVMLTRAKRGVILFGDQFTLANDPANWLPWLKWISSKRAIVHVTKLND 2201
Score = 40 (19.1 bits), Expect = 5.8e-25, Sum P(2) = 5.8e-25
Identities = 13/47 (27%), Positives = 20/47 (42%)
Query: 1126 EKKELFEKAKSLAKSNSNQFYEFVCTEASILSND-ESDLFIMNQQLN 1171
+K KA +L N + Y F + SND + + F N +N
Sbjct: 2212 DKLNKINKAVNLKNINVSDNYYFYGNDTGF-SNDYDQNYFTNNDNIN 2257
>UNIPROTKB|Q8IC35 [details] [associations]
symbol:MAL7P1.12 "Erythrocyte membrane-associated antigen"
species:36329 "Plasmodium falciparum 3D7" [GO:0016020 "membrane"
evidence=ISS] GO:GO:0016020 InterPro:IPR014001 SMART:SM00487
EMBL:AL844506 RefSeq:XP_001348968.1 ProteinModelPortal:Q8IC35
IntAct:Q8IC35 MINT:MINT-1611439 EnsemblProtists:MAL7P1.12:mRNA
GeneID:2655186 KEGG:pfa:MAL7P1.12 EuPathDB:PlasmoDB:PF3D7_0703500
HOGENOM:HOG000283891 ProtClustDB:CLSZ2433351 Uniprot:Q8IC35
Length = 2283
Score = 351 (128.6 bits), Expect = 5.8e-25, Sum P(2) = 5.8e-25
Identities = 95/288 (32%), Positives = 153/288 (53%)
Query: 2 EQLKFVVIDEAAQLKESESAIPLQLPCIQHAILVGDEVQLPAMVESSVSGEAYFGRSLFE 61
E+ + V+IDE AQ E + IPL C + +L+GD QLP + S + + +SL E
Sbjct: 1918 EKFERVIIDECAQSIEPSNLIPLGHYC-NNLVLIGDHKQLPPTIISPDAIKLGLDKSLLE 1976
Query: 62 RLSYLG-HPKHLLSMQYRMHPSISFFPNSYFYENKIRDAP-TVRKRSYEKRFL-PGPMYG 118
R P HLL+ Q RMH SI FPN +FY+NK++ A T R K FL P P
Sbjct: 1977 RFVMAKIAPVHLLNTQRRMHLSICVFPNFHFYDNKLKTANVTEENRPIIKGFLWPNPKCR 2036
Query: 119 PYSFINVFGGR-----EEFIEHSCRNMVEVSVVMKILRNLYKAWVESKEKLSIGIVSPYS 173
+FI+V G+ E S N+ E+ ++ +L+++ S ++ IGI++ Y
Sbjct: 2037 -LAFIDVSIGKPGSKFENAYGTSKFNLYEIEPLITVLKSIINEGCVSVDE--IGILTAYD 2093
Query: 174 AQVIAIQEKLGSKYEKIAGFAVKVKSIDGFQGGEEDIIIISTVRSNNTGSIGFASTPQRI 233
AQ + +++ + + A +++ SIDGFQG E+D+I+ S VRSN +GF +R+
Sbjct: 2094 AQKMKLKKAVQDAFSYEASHRIEIDSIDGFQGKEKDLILFSAVRSNANNELGFLRDARRL 2153
Query: 234 NVALTRARHCLWILGSERTLNHSESVWESLLDDAKARQCFFNIDEDKD 281
NV LTRA+ + + G + TL + + W L +++ ++ + D
Sbjct: 2154 NVMLTRAKRGVILFGDQFTLANDPANWLPWLKWISSKRAIVHVTKLND 2201
Score = 40 (19.1 bits), Expect = 5.8e-25, Sum P(2) = 5.8e-25
Identities = 13/47 (27%), Positives = 20/47 (42%)
Query: 1126 EKKELFEKAKSLAKSNSNQFYEFVCTEASILSND-ESDLFIMNQQLN 1171
+K KA +L N + Y F + SND + + F N +N
Sbjct: 2212 DKLNKINKAVNLKNINVSDNYYFYGNDTGF-SNDYDQNYFTNNDNIN 2257
>UNIPROTKB|F1PCI1 [details] [associations]
symbol:C4orf21 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR010666 Pfam:PF06839 GO:GO:0008270
GeneTree:ENSGT00550000074391 OMA:HKLGTNK EMBL:AAEX03016829
Ensembl:ENSCAFT00000018553 Uniprot:F1PCI1
Length = 1024
Score = 333 (122.3 bits), Expect = 7.6e-24, Sum P(2) = 7.6e-24
Identities = 90/276 (32%), Positives = 148/276 (53%)
Query: 1 MEQLKF--VVIDEAAQLKESESAIPL-QLPCIQHAILVGDEVQL-PAMVESSVSGEAYFG 56
M LKF VV+DE +Q+ E S +P+ + C + ILVGD QL P + S + E
Sbjct: 719 MNDLKFPVVVLDECSQITEPASLLPIARFEC-EKLILVGDPKQLSPTIQGSDAAHENGLE 777
Query: 57 RSLFERLSYLGHPKHLLSMQYRMHPSISFFPNSYFYENKIRDAPTVRKRSYEKRFLPGPM 116
++LF+RL +GH LL QYR HP+IS N FYE + D + +R +LP
Sbjct: 778 QTLFDRLCLMGHKPVLLRTQYRCHPAISDISNDLFYEGNLVDGISETERGPLLEWLP--- 834
Query: 117 YGPYSFINVFGGREEFIEHSCRNMVEVSVVMKILRNLYKAWVESKEKLSIGIVSPYSAQV 176
F N+ G + ++S N+ E + +K++++L + + IG+++ Y +Q+
Sbjct: 835 --TLCFYNIKGPEQIERDNSFHNVAEAAFTLKLIQSLIASGIAGS---MIGVITLYKSQM 889
Query: 177 IAIQEKLGS-KYEKIAGFAVKVKSIDGFQGGEEDIIIISTVRSNNTGSIGFASTPQRINV 235
+ L + ++ AV+V ++D FQG E++III+S VR T +GF + +R+NV
Sbjct: 890 YKLCHLLSAVDFDNPDIKAVQVSTVDAFQGAEKEIIILSCVR---TRQVGFIDSEKRMNV 946
Query: 236 ALTRARHCLWILGSERTLNHSESVWESLLDDAKARQ 271
ALTR R L I+G+ L + +W ++ + R+
Sbjct: 947 ALTRGRRHLLIVGNLACLRKNR-LWGRVIQHCEGRR 981
Score = 38 (18.4 bits), Expect = 7.6e-24, Sum P(2) = 7.6e-24
Identities = 10/21 (47%), Positives = 14/21 (66%)
Query: 1122 KQFTEKKELFEKAKSLAKSNS 1142
K+ EK++ EK KS KS+S
Sbjct: 1004 KRAEEKQKKSEKDKSKDKSHS 1024
>POMBASE|SPCC737.07c [details] [associations]
symbol:SPCC737.07c "DNA polymerase alpha-associated DNA
helicase A (predicted)" species:4896 "Schizosaccharomyces pombe"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006273
"lagging strand elongation" evidence=ISO] [GO:0033203 "DNA helicase
A complex" evidence=ISO] [GO:0043141 "ATP-dependent 5'-3' DNA
helicase activity" evidence=ISO] [GO:0043596 "nuclear replication
fork" evidence=IC] [GO:0005658 "alpha DNA polymerase:primase
complex" evidence=ISO] InterPro:IPR003593 SMART:SM00382
PomBase:SPCC737.07c GO:GO:0005829 GO:GO:0005524 EMBL:CU329672
GenomeReviews:CU329672_GR eggNOG:COG1112 GO:GO:0006273
GO:GO:0043141 PIR:T41580 RefSeq:NP_588369.1
ProteinModelPortal:O94247 STRING:O94247 EnsemblFungi:SPCC737.07c.1
GeneID:2539412 KEGG:spo:SPCC737.07c HOGENOM:HOG000185831
OMA:ERTIFLE OrthoDB:EOG444PTN NextBio:20800576 GO:GO:0033203
Uniprot:O94247
Length = 660
Score = 310 (114.2 bits), Expect = 1.1e-23, P = 1.1e-23
Identities = 95/285 (33%), Positives = 144/285 (50%)
Query: 7 VVIDEAAQLKESESAIPLQLPCIQHAILVGDEVQLPAMVESSVSGEAYFGRSLFERL--S 64
V+IDEA+Q E + IPL + IL GD +QL V+S Y S+FERL S
Sbjct: 386 VIIDEASQALEPQCWIPLL--GMNKVILAGDHMQLSPNVQSK---RPYI--SMFERLVKS 438
Query: 65 YLGHPKHLLSMQYRMHPSISFFPNSYFYENKIRDAPTVRKRSY-------EKRFLPGPMY 117
K L++QYRMH IS FP+ FY++K+ A V+KR E P+Y
Sbjct: 439 QGDLVKCFLNIQYRMHELISKFPSDTFYDSKLVPAEEVKKRLLMDLENVEETELTDSPIY 498
Query: 118 -----GPYSFINVFGGREEFIEHSCRNMVEVSVVMKILRNLYKAWVESKEKLSIGIVSPY 172
G Y + + F + S N E +V + L +A +E+K+ I +V+PY
Sbjct: 499 FYDTLGNYQEDDRSEDMQNFYQDSKSNHWEAQIVSYHISGLLEAGLEAKD---IAVVTPY 555
Query: 173 SAQVIAIQEKLGSKYEKIAGFAVKVKSIDGFQGGEEDIIIISTVRSNNTGSIGFASTPQR 232
+AQV I++ L K G V++ S+D QG E++ II S VRSN+ +GF + +R
Sbjct: 556 NAQVALIRQLLKEK-----GIEVEMGSVDKVQGREKEAIIFSLVRSNDVREVGFLAEKRR 610
Query: 233 INVALTRARHCLWILGSERTLNHSESVWESLLDDAKARQCFFNID 277
+NVA+TR + L ++G T+ + + +D + +ID
Sbjct: 611 LNVAITRPKRHLCVIGDSNTVKWASEFFHQWVDFLEENAIVMDID 655
>RGD|1565575 [details] [associations]
symbol:Setx "senataxin" species:10116 "Rattus norvegicus"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005654 "nucleoplasm" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0006302 "double-strand break repair"
evidence=IEA;ISO] [GO:0006369 "termination of RNA polymerase II
transcription" evidence=ISO] [GO:0007623 "circadian rhythm"
evidence=ISO] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR026121 RGD:1565575 GO:GO:0006302 PANTHER:PTHR10887:SF15
IPI:IPI00560336 Ensembl:ENSRNOT00000018281 UCSC:RGD:1565575
ArrayExpress:F1M0E2 Uniprot:F1M0E2
Length = 380
Score = 191 (72.3 bits), Expect = 2.7e-23, Sum P(2) = 2.7e-23
Identities = 62/194 (31%), Positives = 96/194 (49%)
Query: 7 VVIDEAAQLKESESAIPLQLPCIQHAILVGDEVQLPAMVESSVSGEAYFGRSLFERL--- 63
V++DEA Q E E+ PL C +LVGD QLP V S + E + +S+ R
Sbjct: 27 VIVDEAGQSCEVETLSPLIHRC-NKLVLVGDPKQLPPTVISMKAQEYGYDQSMMARFCKL 85
Query: 64 -------SYLGH-PKHLLSMQYRMHPSISFFPNSYFYENKIRDAPTVRKRSYEKRFLPGP 115
+ +G P L++QYRMHP I FP++Y Y ++ T R + P
Sbjct: 86 LEENVEQNMIGRLPVLQLTIQYRMHPDICLFPSNYVYNKNLK---TNRLTETIRCSSEWP 142
Query: 116 MYGPYSFINVFGGREEFIEHSCRNMVEVSVVMKILRNLYKAWVESKEKLSIGIVSPYSAQ 175
+ PY +V G E+ S N+ E+ +VM+I++ L K + +IGI++ Y AQ
Sbjct: 143 -FQPYLVFDVGDGSEQRDNDSYINVQEIKLVMEIIK-LIKEKRKDISFRNIGIITHYKAQ 200
Query: 176 VIAIQEKLGSKYEK 189
IQ+ L +++K
Sbjct: 201 KTMIQKDLEKEFDK 214
Score = 163 (62.4 bits), Expect = 2.7e-23, Sum P(2) = 2.7e-23
Identities = 34/76 (44%), Positives = 54/76 (71%)
Query: 196 KVKSIDGFQGGEEDIIIISTVRSNNT-GSIGFASTPQRINVALTRARHCLWILGSERTLN 254
+V ++D FQG ++D II++ VR++ GSIGF ++ QR+NV +TRA++ L+ILG RTL
Sbjct: 274 EVDTVDAFQGRQKDCIIVTCVRASAVQGSIGFLASLQRLNVTITRAKYSLFILGHLRTLM 333
Query: 255 HSESVWESLLDDAKAR 270
++ W L+ DA+ R
Sbjct: 334 ENQH-WYELIQDAQKR 348
Score = 43 (20.2 bits), Expect = 8.3e-11, Sum P(2) = 8.3e-11
Identities = 16/46 (34%), Positives = 19/46 (41%)
Query: 1915 SLETGVASAGNVNVENTDSNADECSGSHEGKIIPTSATSASEAQGS 1960
SLE G G V+ D+ G + II T AS QGS
Sbjct: 262 SLENGATHTGPAEVDTVDA----FQGRQKDCIIVT-CVRASAVQGS 302
>SGD|S000000978 [details] [associations]
symbol:ECM32 "DNA dependent ATPase/DNA helicase" species:4932
"Saccharomyces cerevisiae" [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0003678
"DNA helicase activity" evidence=IDA] [GO:0003724 "RNA helicase
activity" evidence=ISS] [GO:0006449 "regulation of translational
termination" evidence=IMP] [GO:0005844 "polysome" evidence=IDA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] SGD:S000000978 GO:GO:0005524 GO:GO:0005737
GO:GO:0003677 GO:GO:0003723 EMBL:BK006939 GO:GO:0005844
eggNOG:COG1112 GeneTree:ENSGT00700000104467 InterPro:IPR014001
SMART:SM00487 GO:GO:0003678 EMBL:U18922 GO:GO:0003724 PIR:S30862
RefSeq:NP_011103.1 ProteinModelPortal:P32644 SMR:P32644
DIP:DIP-5404N IntAct:P32644 MINT:MINT-499764 STRING:P32644
PaxDb:P32644 PeptideAtlas:P32644 EnsemblFungi:YER176W GeneID:856923
KEGG:sce:YER176W CYGD:YER176w HOGENOM:HOG000094475 OMA:KDTPRGT
OrthoDB:EOG4P8JS8 NextBio:983389 Genevestigator:P32644
GermOnline:YER176W GO:GO:0006449 Uniprot:P32644
Length = 1121
Score = 202 (76.2 bits), Expect = 9.8e-22, Sum P(2) = 9.8e-22
Identities = 61/182 (33%), Positives = 95/182 (52%)
Query: 1 MEQLKFVVIDEAAQLKESESAIPLQLPCIQHAILVGDEVQLPAMVESSVSGEAYFGRSLF 60
+++ V++DEA Q E+ + +PL LP I++ + VGDE QL SS S SLF
Sbjct: 811 IKECPVVIMDEATQSSEASTLVPLSLPGIRNFVFVGDEKQL-----SSFSNIPQLETSLF 865
Query: 61 ERLSYLGHPKH--LLSMQYRMHPSISFFPNSYFYENKIRDAPTVRKRSYEKRFLPGPMY- 117
ER+ G K+ +L QYRMHP IS FP Y +++D T ++++ P Y
Sbjct: 866 ERVLSNGTYKNPLMLDTQYRMHPKISEFPIKKIYNGELKDGVTDEQKAWPGVQHPLFFYQ 925
Query: 118 ---GPYSFINVFGGREEFIEHSCRNMVEVSVVMKILRNLYKAWVESKEKLS-IGIVSPYS 173
GP S V + + + + N E ++KI++ L ++ K L IG+++PYS
Sbjct: 926 CDLGPES--RVRSTQRDIVGFTYENKHECVEIVKIIQILM---LDKKVPLEEIGVITPYS 980
Query: 174 AQ 175
AQ
Sbjct: 981 AQ 982
Score = 153 (58.9 bits), Expect = 9.8e-22, Sum P(2) = 9.8e-22
Identities = 29/78 (37%), Positives = 47/78 (60%)
Query: 197 VKSIDGFQGGEEDIIIISTVRSNNTGSIGFASTPQRINVALTRARHCLWILGSERTLNHS 256
V ++D FQG E+ II S VR+N IGF +R+NVALTRA+H L ++G++ L
Sbjct: 1038 VATVDSFQGHEKSFIIFSCVRNNTENKIGFLRDKRRLNVALTRAKHGLIVVGNKNVLRKG 1097
Query: 257 ESVWESLLDDAKARQCFF 274
+ +W+ + + ++ F
Sbjct: 1098 DPLWKDYITYLEEQEVIF 1115
>UNIPROTKB|P38935 [details] [associations]
symbol:IGHMBP2 "DNA-binding protein SMUBP-2" species:9606
"Homo sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0008219 "cell death" evidence=IEA] [GO:0006412
"translation" evidence=NAS] [GO:0030529 "ribonucleoprotein complex"
evidence=ISS] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0000049 "tRNA binding" evidence=IDA] [GO:0032797
"SMN complex" evidence=IDA] [GO:0008134 "transcription factor
binding" evidence=IPI] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IDA] [GO:0008186 "RNA-dependent ATPase activity"
evidence=IDA] [GO:0003677 "DNA binding" evidence=IDA] [GO:0003723
"RNA binding" evidence=IDA] [GO:0032575 "ATP-dependent 5'-3' RNA
helicase activity" evidence=IDA] [GO:0043141 "ATP-dependent 5'-3'
DNA helicase activity" evidence=IDA] [GO:0005524 "ATP binding"
evidence=IDA] [GO:0030424 "axon" evidence=ISS] [GO:0030426 "growth
cone" evidence=ISS] [GO:0043022 "ribosome binding" evidence=IDA]
[GO:0003678 "DNA helicase activity" evidence=TAS] [GO:0003697
"single-stranded DNA binding" evidence=TAS] [GO:0006260 "DNA
replication" evidence=TAS] [GO:0006281 "DNA repair" evidence=TAS]
[GO:0006310 "DNA recombination" evidence=TAS] [GO:0051260 "protein
homooligomerization" evidence=IPI] [GO:0032508 "DNA duplex
unwinding" evidence=TAS] InterPro:IPR000058 InterPro:IPR001374
InterPro:IPR003593 InterPro:IPR004483 InterPro:IPR026853
Pfam:PF01424 Pfam:PF01428 PROSITE:PS51039 PROSITE:PS51061
SMART:SM00154 SMART:SM00382 SMART:SM00393 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0046872 GO:GO:0006412
GO:GO:0006260 GO:GO:0008219 GO:GO:0030424 GO:GO:0008270
GO:GO:0006281 GO:GO:0051260 GO:GO:0006351 GO:GO:0043022
GO:GO:0000122 GO:GO:0030426 GO:GO:0006310 GO:GO:0003697
GO:GO:0030529 GO:GO:0000049 eggNOG:COG1112 InterPro:IPR014001
SMART:SM00487 GO:GO:0043141 HOGENOM:HOG000185831 TIGRFAMs:TIGR00376
Orphanet:98920 EMBL:AP000808 Gene3D:4.10.1110.10 GO:GO:0032575
EMBL:L14754 EMBL:L24544 EMBL:BC025299 EMBL:M64979 IPI:IPI00009379
PIR:A47500 RefSeq:NP_002171.2 UniGene:Hs.503048 PDB:1MSZ PDB:2LRR
PDB:4B3F PDB:4B3G PDBsum:1MSZ PDBsum:2LRR PDBsum:4B3F PDBsum:4B3G
ProteinModelPortal:P38935 SMR:P38935 IntAct:P38935 STRING:P38935
PhosphoSite:P38935 DMDM:229462778 PaxDb:P38935 PRIDE:P38935
Ensembl:ENST00000255078 GeneID:3508 KEGG:hsa:3508 UCSC:uc001ook.1
CTD:3508 GeneCards:GC11P068671 H-InvDB:HIX0009884
H-InvDB:HIX0171377 HGNC:HGNC:5542 MIM:600502 MIM:604320
neXtProt:NX_P38935 PharmGKB:PA29731 HOVERGEN:HBG077019
InParanoid:P38935 OMA:HARQRIS OrthoDB:EOG4GHZNJ PhylomeDB:P38935
EvolutionaryTrace:P38935 GenomeRNAi:3508 NextBio:13764
ArrayExpress:P38935 Bgee:P38935 CleanEx:HS_IGHMBP2
Genevestigator:P38935 GermOnline:ENSG00000132740
PANTHER:PTHR10887:SF23 Uniprot:P38935
Length = 993
Score = 293 (108.2 bits), Expect = 1.8e-21, Sum P(2) = 1.8e-21
Identities = 97/286 (33%), Positives = 149/286 (52%)
Query: 7 VVIDEAAQLKESESAIPLQLPCIQHAILVGDEVQLPAMVESSVSGEAYFGRSLFERLS-- 64
VVIDE AQ E+ IPL L + IL GD QLP S + A SL ERL+
Sbjct: 372 VVIDECAQALEASCWIPL-LKA-RKCILAGDHKQLPPTTVSHKAALAGLSLSLMERLAEE 429
Query: 65 YLGHPKHLLSMQYRMHPSISFFPNSYFYENKIRDAPTVRKRSYEKRFLPGPMY----G-P 119
Y L++QYRMH +I + + Y ++ +V + R LPG G P
Sbjct: 430 YGARVVRTLTVQYRMHQAIMRWASDTMYLGQLTAHSSVARHLL--RDLPGVAATEETGVP 487
Query: 120 YSFINVFG-GR---EEFIEHSCRNMVEVSVVMKILRNLYKAWVESKEKLSIGIVSPYSAQ 175
++ G G EE E S N EV +V ++ L A V +++ I +VSPY+ Q
Sbjct: 488 LLLVDTAGCGLFELEEEDEQSKGNPGEVRLVSLHIQALVDAGVPARD---IAVVSPYNLQ 544
Query: 176 VIAIQEKLGSKYEKIAGFAVKVKSIDGFQGGEEDIIIISTVRSNNTGSIGFASTPQRINV 235
V +++ L ++ ++ ++KS+DGFQG E++ +I+S VRSN G +GF + +RINV
Sbjct: 545 VDLLRQSLVHRHPEL-----EIKSVDGFQGREKEAVILSFVRSNRKGEVGFLAEDRRINV 599
Query: 236 ALTRARHCLWILGSERTLN-HS--ESVWESLLDDAKARQCFFNIDE 278
A+TRAR + ++ RT+N H+ +++ E + R F +D+
Sbjct: 600 AVTRARRHVAVICDSRTVNNHAFLKTLVEYFTQHGEVRTAFEYLDD 645
Score = 56 (24.8 bits), Expect = 1.8e-21, Sum P(2) = 1.8e-21
Identities = 21/87 (24%), Positives = 38/87 (43%)
Query: 1877 HEHLSTLVEIYERLQSSRPKLEPLLNLLFQQYI--NCKGKSLET----GVASAGNVNVEN 1930
H L TLVE + + R E L +++ + Y N +G S G A++ +
Sbjct: 620 HAFLKTLVEYFTQHGEVRTAFEYLDDIVPENYSHENSQGSSHAATKPQGPATSTRTGSQR 679
Query: 1931 TDSNADECSGSHEGKIIPTSATSASEA 1957
+ + + + +G+ P + ASEA
Sbjct: 680 QEGGQEAAAPARQGRKKPAGKSLASEA 706
>TAIR|locus:2056896 [details] [associations]
symbol:AT2G03270 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA;ISS] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR004483
SMART:SM00382 GO:GO:0005524 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0003677 GO:GO:0004386 eggNOG:COG1112 InterPro:IPR014001
SMART:SM00487 EMBL:AC005313 EMBL:AC006284 HOGENOM:HOG000185831
TIGRFAMs:TIGR00376 UniGene:At.10455 UniGene:At.71239 EMBL:AY045820
EMBL:AY091361 IPI:IPI00521943 PIR:T02699 RefSeq:NP_565299.1
ProteinModelPortal:O81047 SMR:O81047 STRING:O81047 PaxDb:O81047
PRIDE:O81047 EnsemblPlants:AT2G03270.1 GeneID:814856
KEGG:ath:AT2G03270 TAIR:At2g03270 InParanoid:O81047 OMA:GHPSRVS
PhylomeDB:O81047 ProtClustDB:CLSN2687941 ArrayExpress:O81047
Genevestigator:O81047 Uniprot:O81047
Length = 639
Score = 288 (106.4 bits), Expect = 2.5e-21, P = 2.5e-21
Identities = 87/253 (34%), Positives = 131/253 (51%)
Query: 7 VVIDEAAQLKESESAIPLQLPCIQHAILVGDEVQLPAMVESSVSGEAYFGRSLFERLS-- 64
V+IDE AQ E I L IL GD +QLP ++S+ + GR+LFERL+
Sbjct: 366 VIIDEGAQALEVACWIALLKG--SRCILAGDHLQLPPTIQSAEAERKGLGRTLFERLADL 423
Query: 65 YLGHPKHLLSMQYRMHPSISFFPNSYFYENKIRDAPTVRKR---SYEKRFLPGPMYGPYS 121
Y K +L++QYRMH I + + Y+NKI +V E
Sbjct: 424 YGDEIKSMLTVQYRMHELIMNWSSKELYDNKITAHSSVASHMLFDLENVTKSSSTEATLL 483
Query: 122 FINVFG-GREEFI--EHSCRNMVEVSVVMKILRNLYKAWVESKEKLSIGIVSPYSAQVIA 178
++ G EE E S N E V M + L ++ V+ + IGI++PY+AQV+
Sbjct: 484 LVDTAGCDMEEKKDEEESTYNEGEAEVAMAHAKRLMESGVQPSD---IGIITPYAAQVML 540
Query: 179 IQEKLGSKYEKIAGFAVKVKSIDGFQGGEEDIIIISTVRSNNTGSIGFASTPQRINVALT 238
++ G K EK+ +++ ++DGFQG E++ IIIS VRSN+ +GF +R+NVA+T
Sbjct: 541 LRILRG-KEEKLKD--MEISTVDGFQGREKEAIIISMVRSNSKKEVGFLKDQRRMNVAVT 597
Query: 239 RARH-CLWILGSE 250
R+R C + +E
Sbjct: 598 RSRRQCCIVCDTE 610
>UNIPROTKB|E2R760 [details] [associations]
symbol:IGHMBP2 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0051260 "protein homooligomerization"
evidence=IEA] [GO:0043141 "ATP-dependent 5'-3' DNA helicase
activity" evidence=IEA] [GO:0043022 "ribosome binding"
evidence=IEA] [GO:0032797 "SMN complex" evidence=IEA] [GO:0032575
"ATP-dependent 5'-3' RNA helicase activity" evidence=IEA]
[GO:0008134 "transcription factor binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000049
"tRNA binding" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000058 InterPro:IPR001374 InterPro:IPR003593
InterPro:IPR004483 InterPro:IPR026853 Pfam:PF01424 Pfam:PF01428
PROSITE:PS51039 PROSITE:PS51061 SMART:SM00154 SMART:SM00382
SMART:SM00393 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0051260
GO:GO:0043022 GO:GO:0000049 InterPro:IPR014001 SMART:SM00487
GO:GO:0043141 GO:GO:0032797 GeneTree:ENSGT00700000104572
TIGRFAMs:TIGR00376 Gene3D:4.10.1110.10 GO:GO:0032575
PANTHER:PTHR10887:SF23 EMBL:AAEX03011604 Ensembl:ENSCAFT00000038980
NextBio:20858044 Uniprot:E2R760
Length = 992
Score = 289 (106.8 bits), Expect = 4.7e-21, P = 4.7e-21
Identities = 91/286 (31%), Positives = 151/286 (52%)
Query: 7 VVIDEAAQLKESESAIPLQLPCIQHAILVGDEVQLPAMVESSVSGEAYFGRSLFERLS-- 64
VVIDE AQ E+ IPL L + IL GD QLP S + A SL ERL+
Sbjct: 371 VVIDECAQALEASCWIPL-LKA-RKCILAGDHKQLPPTTVSHKAALAGLSLSLMERLAEE 428
Query: 65 YLGHPKHLLSMQYRMHPSISFFPNSYFYENKIRDAPTVRKRSYEKRFLPGPMY----G-P 119
+ L++QYRMH +I + + Y ++ P+V + R LPG G P
Sbjct: 429 HGARVVRTLTVQYRMHQAIMRWASEALYHGQLTAHPSVA--GHLLRDLPGVAATEETGIP 486
Query: 120 YSFINVFG-GR---EEFIEHSCRNMVEVSVVMKILRNLYKAWVESKEKLSIGIVSPYSAQ 175
++ G G E+ + S N EV +V ++ L A V++ + I +++PY+ Q
Sbjct: 487 LLLVDTAGCGLFELEDDDDQSKGNPGEVRLVSLHIQALVDAGVQASD---IAVITPYNLQ 543
Query: 176 VIAIQEKLGSKYEKIAGFAVKVKSIDGFQGGEEDIIIISTVRSNNTGSIGFASTPQRINV 235
V +++ L ++ ++ ++KS+DGFQG E++ +++S VRSN G +GF + +RINV
Sbjct: 544 VDLLRQSLAHRHPEL-----EIKSVDGFQGREKEAVVLSFVRSNRKGEVGFLAEDRRINV 598
Query: 236 ALTRARHCLWILGSERTL-NHS--ESVWESLLDDAKARQCFFNIDE 278
A+TRAR + ++ RT+ NH+ +++ + + + R F +D+
Sbjct: 599 AVTRARRHVAVVCDSRTVSNHAFLKTLVDHFTEHGEVRTAFEYLDD 644
>UNIPROTKB|E2R8W1 [details] [associations]
symbol:IGHMBP2 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0043141 "ATP-dependent 5'-3' DNA helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR000058
InterPro:IPR001374 InterPro:IPR003593 InterPro:IPR004483
InterPro:IPR026853 Pfam:PF01424 Pfam:PF01428 PROSITE:PS51039
PROSITE:PS51061 SMART:SM00154 SMART:SM00382 SMART:SM00393
GO:GO:0005524 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
InterPro:IPR014001 SMART:SM00487 GO:GO:0043141
GeneTree:ENSGT00700000104572 TIGRFAMs:TIGR00376 Gene3D:4.10.1110.10
CTD:3508 OMA:HARQRIS PANTHER:PTHR10887:SF23 EMBL:AAEX03011604
RefSeq:XP_540807.2 Ensembl:ENSCAFT00000017093 GeneID:483686
KEGG:cfa:483686 Uniprot:E2R8W1
Length = 1010
Score = 289 (106.8 bits), Expect = 4.8e-21, P = 4.8e-21
Identities = 91/286 (31%), Positives = 151/286 (52%)
Query: 7 VVIDEAAQLKESESAIPLQLPCIQHAILVGDEVQLPAMVESSVSGEAYFGRSLFERLS-- 64
VVIDE AQ E+ IPL L + IL GD QLP S + A SL ERL+
Sbjct: 371 VVIDECAQALEASCWIPL-LKA-RKCILAGDHKQLPPTTVSHKAALAGLSLSLMERLAEE 428
Query: 65 YLGHPKHLLSMQYRMHPSISFFPNSYFYENKIRDAPTVRKRSYEKRFLPGPMY----G-P 119
+ L++QYRMH +I + + Y ++ P+V + R LPG G P
Sbjct: 429 HGARVVRTLTVQYRMHQAIMRWASEALYHGQLTAHPSVA--GHLLRDLPGVAATEETGIP 486
Query: 120 YSFINVFG-GR---EEFIEHSCRNMVEVSVVMKILRNLYKAWVESKEKLSIGIVSPYSAQ 175
++ G G E+ + S N EV +V ++ L A V++ + I +++PY+ Q
Sbjct: 487 LLLVDTAGCGLFELEDDDDQSKGNPGEVRLVSLHIQALVDAGVQASD---IAVITPYNLQ 543
Query: 176 VIAIQEKLGSKYEKIAGFAVKVKSIDGFQGGEEDIIIISTVRSNNTGSIGFASTPQRINV 235
V +++ L ++ ++ ++KS+DGFQG E++ +++S VRSN G +GF + +RINV
Sbjct: 544 VDLLRQSLAHRHPEL-----EIKSVDGFQGREKEAVVLSFVRSNRKGEVGFLAEDRRINV 598
Query: 236 ALTRARHCLWILGSERTL-NHS--ESVWESLLDDAKARQCFFNIDE 278
A+TRAR + ++ RT+ NH+ +++ + + + R F +D+
Sbjct: 599 AVTRARRHVAVVCDSRTVSNHAFLKTLVDHFTEHGEVRTAFEYLDD 644
>FB|FBgn0035842 [details] [associations]
symbol:CG7504 species:7227 "Drosophila melanogaster"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0005875 "microtubule associated complex" evidence=IDA]
InterPro:IPR000253 InterPro:IPR008984 Pfam:PF00498 PROSITE:PS50006
SMART:SM00240 GO:GO:0005875 EMBL:AE014296 GO:GO:0006200
GO:GO:0016887 Gene3D:2.60.200.20 SUPFAM:SSF49879 eggNOG:COG1112
KO:K10706 GeneTree:ENSGT00580000081652 RefSeq:NP_001137907.1
UniGene:Dm.31993 ProteinModelPortal:B7Z0D7 SMR:B7Z0D7 STRING:B7Z0D7
PaxDb:B7Z0D7 EnsemblMetazoa:FBtr0273367 GeneID:38904
KEGG:dme:Dmel_CG7504 FlyBase:FBgn0035842 OMA:NRSKSCY
OrthoDB:EOG4DV42G GenomeRNAi:38904 NextBio:810939 Bgee:B7Z0D7
Uniprot:B7Z0D7
Length = 1676
Score = 291 (107.5 bits), Expect = 6.1e-21, P = 6.1e-21
Identities = 91/291 (31%), Positives = 147/291 (50%)
Query: 8 VIDEAAQLKESESAIPLQLPCIQHAILVGDEVQLPAMVESSVSGEAYFGRSLFERL---- 63
++DEA Q E + +P++ + H +LVGD QLPA+V S + + S+F+R+
Sbjct: 1389 IVDEATQCTEPWTLLPMRFG-LTHMVLVGDMQQLPAVVLSKKAIDFGLSNSMFDRIQRSL 1447
Query: 64 -SYLGHPK--HLLSMQ-YRMHPSISFFPNSYFYENKIRDAPTVRKRSYEKRFLPGPMYGP 119
+ L P HL+ + +++ P + N+ + RF P+ P
Sbjct: 1448 QTQLDKPGSYHLMHTKLFKLSTQYRMHPEICRWPNQYFYEDQLINAECTARFA-SPLI-P 1505
Query: 120 YSFINV-FGGREEFIEH-SCRNMVEVSVVMKILRNLYKAWVESKEKLSIGIVSPYSAQVI 177
Y IN+ + ++ S N E V K+L + K + SK + S G++SPY Q
Sbjct: 1506 YCVINLKYTCDSNGAQNKSISNNEEARFVAKLLTEMDKH-MPSK-RFSYGLISPYQNQCY 1563
Query: 178 AIQEKLGSKYEKIAGFAVKVKSIDGFQGGEEDIIIISTVRSNNTGSIGFASTPQRINVAL 237
A+ + + S + +++D +QG E+D+IIIS R T GF + QR+NVAL
Sbjct: 1564 ALSQVIPSHMN------ITPQTVDSYQGLEKDVIIISNAR---TRGCGFLTNYQRLNVAL 1614
Query: 238 TRARHCLWILGSERTLNHSESVWESLLDDAKARQCFFNIDED--KDLAKAI 286
TR R CL I G+ L E +W +LLDDA+ R+ +FN+D D DL +++
Sbjct: 1615 TRPRRCLVICGNFEDLKSVE-MWRNLLDDARKRKVYFNLDRDDVNDLDRSL 1664
>UNIPROTKB|F1MHU8 [details] [associations]
symbol:IGHMBP2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051260 "protein homooligomerization" evidence=IEA]
[GO:0043141 "ATP-dependent 5'-3' DNA helicase activity"
evidence=IEA] [GO:0043022 "ribosome binding" evidence=IEA]
[GO:0032797 "SMN complex" evidence=IEA] [GO:0032575 "ATP-dependent
5'-3' RNA helicase activity" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0000049 "tRNA binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR000058
InterPro:IPR001374 InterPro:IPR003593 InterPro:IPR004483
InterPro:IPR026853 Pfam:PF01424 Pfam:PF01428 PROSITE:PS51039
PROSITE:PS51061 SMART:SM00154 SMART:SM00382 SMART:SM00393
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0051260 GO:GO:0043022
GO:GO:0000049 InterPro:IPR014001 SMART:SM00487 GO:GO:0043141
GO:GO:0032797 GeneTree:ENSGT00700000104572 TIGRFAMs:TIGR00376
Gene3D:4.10.1110.10 GO:GO:0032575 CTD:3508 OMA:HARQRIS
PANTHER:PTHR10887:SF23 EMBL:DAAA02063651 IPI:IPI01017505
RefSeq:XP_003584325.1 RefSeq:XP_003588118.1 UniGene:Bt.103594
Ensembl:ENSBTAT00000044489 GeneID:618606 KEGG:bta:618606
Uniprot:F1MHU8
Length = 981
Score = 294 (108.6 bits), Expect = 1.5e-20, Sum P(2) = 1.5e-20
Identities = 94/286 (32%), Positives = 153/286 (53%)
Query: 7 VVIDEAAQLKESESAIPLQLPCIQHAILVGDEVQLPAMVESSVSGEAYFGRSLFERLS-- 64
VVIDE AQ E+ IPL L + IL GD QLP + S + A SL ERL+
Sbjct: 369 VVIDECAQALEASCWIPL-LKA-RKCILAGDHKQLPPTIVSHKAALAGLSLSLMERLAER 426
Query: 65 YLGHPKHLLSMQYRMHPSISFFPNSYFYENKIRDAPTVRKRSYEKRFLPGPMY----G-P 119
+ +L++QYRMH +I+ + + Y ++ P+V + R LPG G P
Sbjct: 427 HGAGALRMLTVQYRMHQAIARWASEALYHGQLTAHPSVA--GHLLRDLPGVAATEETGVP 484
Query: 120 YSFINVFG-GR---EEFIEHSCRNMVEVSVVMKILRNLYKAWVESKEKLSIGIVSPYSAQ 175
++ G G EE E S N EV +V ++ L A V + + I +++PY+ Q
Sbjct: 485 LLLVDTAGCGLLELEEDDEQSKGNPGEVRLVGLHVQALVDAGVRAAD---IAVITPYNLQ 541
Query: 176 VIAIQEKLGSKYEKIAGFAVKVKSIDGFQGGEEDIIIISTVRSNNTGSIGFASTPQRINV 235
V +++ L + ++ +++S+DGFQG E++ +I+S VRSN G +GF + +RINV
Sbjct: 542 VDLLRQSLAHRLPEL-----EIRSVDGFQGREKEAVILSFVRSNRKGEVGFLAEDRRINV 596
Query: 236 ALTRARHCLWILGSERTL-NHS--ESVWESLLDDAKARQCFFNIDE 278
A+TRAR + ++ RT+ NH+ +++ + L + + R F +D+
Sbjct: 597 AVTRARRHVAVVCDSRTVSNHAFLKTLVDYLTEHGEVRTAFEYLDD 642
Score = 46 (21.3 bits), Expect = 1.5e-20, Sum P(2) = 1.5e-20
Identities = 12/23 (52%), Positives = 14/23 (60%)
Query: 653 LKPET-SLIYGEPPVLLESGNDE 674
L+PET S EPPV SG D+
Sbjct: 790 LRPETPSCKQPEPPVRDSSGRDQ 812
>UNIPROTKB|F1RY71 [details] [associations]
symbol:IGHMBP2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051260 "protein homooligomerization" evidence=IEA]
[GO:0043141 "ATP-dependent 5'-3' DNA helicase activity"
evidence=IEA] [GO:0043022 "ribosome binding" evidence=IEA]
[GO:0032797 "SMN complex" evidence=IEA] [GO:0032575 "ATP-dependent
5'-3' RNA helicase activity" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0000049 "tRNA binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR000058
InterPro:IPR001374 InterPro:IPR003593 InterPro:IPR004483
InterPro:IPR026853 Pfam:PF01424 Pfam:PF01428 PROSITE:PS51039
PROSITE:PS51061 SMART:SM00382 SMART:SM00393 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0051260 GO:GO:0043022 GO:GO:0000049
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0043141
GO:GO:0032797 GeneTree:ENSGT00700000104572 TIGRFAMs:TIGR00376
Gene3D:4.10.1110.10 GO:GO:0032575 CTD:3508 OMA:HARQRIS
PANTHER:PTHR10887:SF23 EMBL:CU694814 RefSeq:XP_003122472.2
Ensembl:ENSSSCT00000014076 GeneID:100520173 KEGG:ssc:100520173
Uniprot:F1RY71
Length = 987
Score = 279 (103.3 bits), Expect = 5.5e-20, P = 5.5e-20
Identities = 92/286 (32%), Positives = 150/286 (52%)
Query: 7 VVIDEAAQLKESESAIPLQLPCIQHAILVGDEVQLPAMVESSVSGEAYFGRSLFERL-SY 65
VVIDE AQ E+ +PL L + IL GD QLP + S + A SL ERL
Sbjct: 369 VVIDECAQALEASCWVPL-LKA-RKCILAGDHKQLPPTIISHKAALAGLALSLMERLVEE 426
Query: 66 LGHPK-HLLSMQYRMHPSISFFPNSYFYENKIRDAPTVRKRSYEKRFLPGPMY----G-P 119
G +L++QYRMH +I+ + + Y ++ +V + R LPG G P
Sbjct: 427 RGAGVLRMLTVQYRMHQAIAQWASEALYHGRLTAHASVA--GHLLRDLPGVAATEETGIP 484
Query: 120 YSFINVFG-GR---EEFIEHSCRNMVEVSVVMKILRNLYKAWVESKEKLSIGIVSPYSAQ 175
++ G G EE E S N EV +V ++ L A V + + + +++PY+ Q
Sbjct: 485 LLLVDTAGCGLFELEEEDEQSKGNPGEVRLVRLHVQALVDAGVPAGD---VAVITPYNLQ 541
Query: 176 VIAIQEKLGSKYEKIAGFAVKVKSIDGFQGGEEDIIIISTVRSNNTGSIGFASTPQRINV 235
V +++ L ++ ++ ++KS+DGFQG E++ +I+S VRSN G +GF + +RINV
Sbjct: 542 VDLLRQSLAQRHPEL-----EIKSVDGFQGREKEAVILSFVRSNRKGEVGFLAEDRRINV 596
Query: 236 ALTRARHCLWILGSERTL-NHS--ESVWESLLDDAKARQCFFNIDE 278
A+TRAR + ++ RT+ NH+ +++ + + R F +D+
Sbjct: 597 AVTRARRHVAVVCDSRTVSNHAFLKTLVAYFAEHGEVRTAFEYLDD 642
>RGD|68325 [details] [associations]
symbol:Ighmbp2 "immunoglobulin mu binding protein 2" species:10116
"Rattus norvegicus" [GO:0000049 "tRNA binding" evidence=IEA;ISO;ISS]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0001078 "RNA polymerase II
core promoter proximal region sequence-specific DNA binding
transcription factor activity involved in negative regulation of
transcription" evidence=IDA] [GO:0003677 "DNA binding"
evidence=IEA;ISO;IDA] [GO:0003723 "RNA binding" evidence=ISO;ISS]
[GO:0005524 "ATP binding" evidence=IEA;ISO;ISS] [GO:0005634
"nucleus" evidence=IEA;ISO;ISS] [GO:0005737 "cytoplasm"
evidence=IEA;ISO;ISS] [GO:0008094 "DNA-dependent ATPase activity"
evidence=ISO;ISS] [GO:0008134 "transcription factor binding"
evidence=IEA;ISO] [GO:0008186 "RNA-dependent ATPase activity"
evidence=ISO;ISS] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0021522 "spinal cord motor neuron differentiation" evidence=ISO]
[GO:0030424 "axon" evidence=IEA;ISO] [GO:0030426 "growth cone"
evidence=ISO] [GO:0030529 "ribonucleoprotein complex"
evidence=IEA;ISO] [GO:0032575 "ATP-dependent 5'-3' RNA helicase
activity" evidence=IEA;ISO;ISS] [GO:0032797 "SMN complex"
evidence=IEA;ISO] [GO:0043022 "ribosome binding"
evidence=IEA;ISO;ISS] [GO:0043025 "neuronal cell body" evidence=ISO]
[GO:0043141 "ATP-dependent 5'-3' DNA helicase activity"
evidence=IEA;ISO;ISS] [GO:0043621 "protein self-association"
evidence=ISS] [GO:0048471 "perinuclear region of cytoplasm"
evidence=ISO] [GO:0051260 "protein homooligomerization"
evidence=IEA;ISO] InterPro:IPR000058 InterPro:IPR001374
InterPro:IPR003593 InterPro:IPR004483 InterPro:IPR026853
Pfam:PF01424 Pfam:PF01428 PROSITE:PS51039 PROSITE:PS51061
SMART:SM00154 SMART:SM00382 SMART:SM00393 RGD:68325 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0046872 GO:GO:0003677
GO:GO:0030424 GO:GO:0001078 GO:GO:0008270 GO:GO:0051260
GO:GO:0043621 GO:GO:0043022 GO:GO:0030529 GO:GO:0000049
eggNOG:COG1112 InterPro:IPR014001 SMART:SM00487 GO:GO:0043141
GO:GO:0032797 HOGENOM:HOG000185831 TIGRFAMs:TIGR00376
Gene3D:4.10.1110.10 GO:GO:0032575 CTD:3508 OrthoDB:EOG4GHZNJ
PANTHER:PTHR10887:SF23 EMBL:AF199411 IPI:IPI00190206
RefSeq:NP_113774.1 UniGene:Rn.23984 HSSP:P38935
ProteinModelPortal:Q9EQN5 SMR:Q9EQN5 STRING:Q9EQN5 PRIDE:Q9EQN5
GeneID:29532 KEGG:rno:29532 UCSC:RGD:68325 InParanoid:Q9EQN5
NextBio:609508 ArrayExpress:Q9EQN5 Genevestigator:Q9EQN5
Uniprot:Q9EQN5
Length = 988
Score = 294 (108.6 bits), Expect = 8.0e-20, Sum P(2) = 8.0e-20
Identities = 92/287 (32%), Positives = 150/287 (52%)
Query: 7 VVIDEAAQLKESESAIPL-QLPCIQHAILVGDEVQLPAMVESSVSGEAYFGRSLFERLS- 64
VV+DE AQ E+ IPL + P IL GD QLP S + A RSL ERL+
Sbjct: 371 VVVDECAQALEASCWIPLLKAP---KCILAGDHKQLPPTTVSHKAALAGLSRSLMERLAE 427
Query: 65 -YLGHPKHLLSMQYRMHPSISFFPNSYFYENKIRDAPTVRKRSYEKRFLPG-----PMYG 118
+ +L++QYRMH +I+ + + Y ++ P+V + + LPG
Sbjct: 428 KHGAAVVRMLAVQYRMHQAITRWASEAMYHGQLTAHPSVA--GHLLKDLPGVADTEETSV 485
Query: 119 PYSFINVFG-GREEFIEHSCR---NMVEVSVVMKILRNLYKAWVESKEKLSIGIVSPYSA 174
P I+ G G E E + N EV +V ++ L A V++ + I +++PY+
Sbjct: 486 PLLLIDTAGCGLLELEEEDSQSKGNPGEVRLVTLHIQALVDAGVQAGD---IAVIAPYNL 542
Query: 175 QVIAIQEKLGSKYEKIAGFAVKVKSIDGFQGGEEDIIIISTVRSNNTGSIGFASTPQRIN 234
QV +++ L +K+ ++ ++KS+DGFQG E++ +I++ VRSN G +GF + +RIN
Sbjct: 543 QVDLLRQSLSNKHPEL-----EIKSVDGFQGREKEAVILTFVRSNRKGEVGFLAEDRRIN 597
Query: 235 VALTRAR-HCLWILGSERTLNHS--ESVWESLLDDAKARQCFFNIDE 278
VA+TRAR H I S NH+ +++ + + + R F +D+
Sbjct: 598 VAVTRARRHVAVICDSHTVNNHAFLKTLVDYFTEHGEVRTAFEYLDD 644
Score = 39 (18.8 bits), Expect = 8.0e-20, Sum P(2) = 8.0e-20
Identities = 11/31 (35%), Positives = 17/31 (54%)
Query: 819 KRLLVQVRQLDDSLAQAMQVASSPEEWKSRG 849
KR +Q R+LD L + +S ++ K RG
Sbjct: 958 KRAQLQ-RKLDKKLGELSSQRTSKKKEKERG 987
>UNIPROTKB|Q9EQN5 [details] [associations]
symbol:Ighmbp2 "DNA-binding protein SMUBP-2" species:10116
"Rattus norvegicus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR000058 InterPro:IPR001374 InterPro:IPR003593
InterPro:IPR004483 InterPro:IPR026853 Pfam:PF01424 Pfam:PF01428
PROSITE:PS51039 PROSITE:PS51061 SMART:SM00154 SMART:SM00382
SMART:SM00393 RGD:68325 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0046872 GO:GO:0003677 GO:GO:0030424 GO:GO:0001078
GO:GO:0008270 GO:GO:0051260 GO:GO:0043621 GO:GO:0043022
GO:GO:0030529 GO:GO:0000049 eggNOG:COG1112 InterPro:IPR014001
SMART:SM00487 GO:GO:0043141 GO:GO:0032797 HOGENOM:HOG000185831
TIGRFAMs:TIGR00376 Gene3D:4.10.1110.10 GO:GO:0032575 CTD:3508
OrthoDB:EOG4GHZNJ PANTHER:PTHR10887:SF23 EMBL:AF199411
IPI:IPI00190206 RefSeq:NP_113774.1 UniGene:Rn.23984 HSSP:P38935
ProteinModelPortal:Q9EQN5 SMR:Q9EQN5 STRING:Q9EQN5 PRIDE:Q9EQN5
GeneID:29532 KEGG:rno:29532 UCSC:RGD:68325 InParanoid:Q9EQN5
NextBio:609508 ArrayExpress:Q9EQN5 Genevestigator:Q9EQN5
Uniprot:Q9EQN5
Length = 988
Score = 294 (108.6 bits), Expect = 8.0e-20, Sum P(2) = 8.0e-20
Identities = 92/287 (32%), Positives = 150/287 (52%)
Query: 7 VVIDEAAQLKESESAIPL-QLPCIQHAILVGDEVQLPAMVESSVSGEAYFGRSLFERLS- 64
VV+DE AQ E+ IPL + P IL GD QLP S + A RSL ERL+
Sbjct: 371 VVVDECAQALEASCWIPLLKAP---KCILAGDHKQLPPTTVSHKAALAGLSRSLMERLAE 427
Query: 65 -YLGHPKHLLSMQYRMHPSISFFPNSYFYENKIRDAPTVRKRSYEKRFLPG-----PMYG 118
+ +L++QYRMH +I+ + + Y ++ P+V + + LPG
Sbjct: 428 KHGAAVVRMLAVQYRMHQAITRWASEAMYHGQLTAHPSVA--GHLLKDLPGVADTEETSV 485
Query: 119 PYSFINVFG-GREEFIEHSCR---NMVEVSVVMKILRNLYKAWVESKEKLSIGIVSPYSA 174
P I+ G G E E + N EV +V ++ L A V++ + I +++PY+
Sbjct: 486 PLLLIDTAGCGLLELEEEDSQSKGNPGEVRLVTLHIQALVDAGVQAGD---IAVIAPYNL 542
Query: 175 QVIAIQEKLGSKYEKIAGFAVKVKSIDGFQGGEEDIIIISTVRSNNTGSIGFASTPQRIN 234
QV +++ L +K+ ++ ++KS+DGFQG E++ +I++ VRSN G +GF + +RIN
Sbjct: 543 QVDLLRQSLSNKHPEL-----EIKSVDGFQGREKEAVILTFVRSNRKGEVGFLAEDRRIN 597
Query: 235 VALTRAR-HCLWILGSERTLNHS--ESVWESLLDDAKARQCFFNIDE 278
VA+TRAR H I S NH+ +++ + + + R F +D+
Sbjct: 598 VAVTRARRHVAVICDSHTVNNHAFLKTLVDYFTEHGEVRTAFEYLDD 644
Score = 39 (18.8 bits), Expect = 8.0e-20, Sum P(2) = 8.0e-20
Identities = 11/31 (35%), Positives = 17/31 (54%)
Query: 819 KRLLVQVRQLDDSLAQAMQVASSPEEWKSRG 849
KR +Q R+LD L + +S ++ K RG
Sbjct: 958 KRAQLQ-RKLDKKLGELSSQRTSKKKEKERG 987
>UNIPROTKB|Q60560 [details] [associations]
symbol:IGHMBP2 "DNA-binding protein SMUBP-2" species:10036
"Mesocricetus auratus" [GO:0000049 "tRNA binding" evidence=ISS]
[GO:0003723 "RNA binding" evidence=ISS] [GO:0005524 "ATP binding"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0008094 "DNA-dependent ATPase
activity" evidence=ISS] [GO:0008186 "RNA-dependent ATPase activity"
evidence=ISS] [GO:0032575 "ATP-dependent 5'-3' RNA helicase
activity" evidence=ISS] [GO:0043022 "ribosome binding"
evidence=ISS] [GO:0043141 "ATP-dependent 5'-3' DNA helicase
activity" evidence=ISS] [GO:0043621 "protein self-association"
evidence=ISS] InterPro:IPR000058 InterPro:IPR001374
InterPro:IPR003593 InterPro:IPR004483 InterPro:IPR026853
Pfam:PF01424 Pfam:PF01428 PROSITE:PS51039 PROSITE:PS51061
SMART:SM00154 SMART:SM00382 SMART:SM00393 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0030424 GO:GO:0008270 GO:GO:0006351
GO:GO:0043621 GO:GO:0043022 GO:GO:0030529 GO:GO:0000049
InterPro:IPR014001 SMART:SM00487 GO:GO:0043141 TIGRFAMs:TIGR00376
Gene3D:4.10.1110.10 GO:GO:0032575 HOVERGEN:HBG077019
PANTHER:PTHR10887:SF23 EMBL:L15625 PIR:T48845
ProteinModelPortal:Q60560 SMR:Q60560 Uniprot:Q60560
Length = 989
Score = 293 (108.2 bits), Expect = 1.3e-19, Sum P(2) = 1.3e-19
Identities = 91/287 (31%), Positives = 151/287 (52%)
Query: 7 VVIDEAAQLKESESAIPL-QLPCIQHAILVGDEVQLPAMVESSVSGEAYFGRSLFERL-- 63
VV+DE AQ E+ IPL + P IL GD QLP S + A RSL ERL
Sbjct: 371 VVVDECAQALEASCWIPLLKAP---KCILAGDHRQLPPTTISHKAALAGLSRSLMERLVE 427
Query: 64 SYLGHPKHLLSMQYRMHPSISFFPNSYFYENKIRDAPTVRKRSYEKRFLPG-----PMYG 118
+ +L++QYRMH +I+ + + Y ++ P+V + + LPG
Sbjct: 428 KHGAGAVRMLTVQYRMHQAITRWASEAMYHGQLTAHPSVA--GHLLKDLPGVADTEETSV 485
Query: 119 PYSFINVFG-GREEFIEHSCR---NMVEVSVVMKILRNLYKAWVESKEKLSIGIVSPYSA 174
P I+ G G E E + N EV +V ++ L A V + + I +++PY+
Sbjct: 486 PLLLIDTAGCGLLELDEEDSQSKGNPGEVRLVTLHIQALVDAGVHAGD---IAVIAPYNL 542
Query: 175 QVIAIQEKLGSKYEKIAGFAVKVKSIDGFQGGEEDIIIISTVRSNNTGSIGFASTPQRIN 234
QV +++ L +K+ ++ ++KS+DGFQG E++ +I++ VRSN G +GF + +RIN
Sbjct: 543 QVDLLRQSLSNKHPEL-----EIKSVDGFQGREKEAVILTFVRSNRKGEVGFLAEDRRIN 597
Query: 235 VALTRARHCLWILGSERTLN-HS--ESVWESLLDDAKARQCFFNIDE 278
VA+TRAR + ++ RT+N H+ +++ + + + R F +D+
Sbjct: 598 VAVTRARRHVAVICDSRTVNNHAFLKTLVDYFTEHGEVRTAFEYLDD 644
Score = 38 (18.4 bits), Expect = 1.3e-19, Sum P(2) = 1.3e-19
Identities = 11/31 (35%), Positives = 16/31 (51%)
Query: 819 KRLLVQVRQLDDSLAQAMQVASSPEEWKSRG 849
KR +Q R+LD L + +S + K RG
Sbjct: 959 KRAQLQ-RRLDKKLGELSSQRTSKRKEKERG 988
>UNIPROTKB|E1BY42 [details] [associations]
symbol:E1BY42 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0008134 "transcription factor
binding" evidence=IEA] [GO:0032575 "ATP-dependent 5'-3' RNA
helicase activity" evidence=IEA] [GO:0032797 "SMN complex"
evidence=IEA] [GO:0043022 "ribosome binding" evidence=IEA]
[GO:0043141 "ATP-dependent 5'-3' DNA helicase activity"
evidence=IEA] [GO:0051260 "protein homooligomerization"
evidence=IEA] [GO:0000049 "tRNA binding" evidence=IEA]
InterPro:IPR000058 InterPro:IPR001374 InterPro:IPR003593
InterPro:IPR004483 InterPro:IPR026853 Pfam:PF01424 Pfam:PF01428
PROSITE:PS51061 SMART:SM00382 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0003677 GO:GO:0008270 GO:GO:0051260
GO:GO:0043022 GO:GO:0000049 InterPro:IPR014001 SMART:SM00487
GO:GO:0043141 GO:GO:0032797 GeneTree:ENSGT00700000104572
TIGRFAMs:TIGR00376 Gene3D:4.10.1110.10 GO:GO:0032575 OMA:HARQRIS
PANTHER:PTHR10887:SF23 EMBL:AADN02040052 EMBL:AADN02040053
IPI:IPI00595444 Ensembl:ENSGALT00000006901 Uniprot:E1BY42
Length = 976
Score = 286 (105.7 bits), Expect = 1.3e-19, Sum P(2) = 1.3e-19
Identities = 93/271 (34%), Positives = 143/271 (52%)
Query: 7 VVIDEAAQLKESESAIPL-QLPCIQHAILVGDEVQLPAMVESSVSGEAYFGRSLFERL-- 63
VVIDE AQ E+ IPL + P IL GD QLP + S + SL ER+
Sbjct: 368 VVIDECAQALEASCWIPLLKAP---KCILAGDHKQLPPTIISHKAAAKGLSLSLMERVIE 424
Query: 64 SYLGHPKHLLSMQYRMHPSISFFPNSYFYENKIRDAPTVRKRSYEKRFLPGPMYG----- 118
Y +L++QYRMH +I + +S Y ++ P+V + + LPG
Sbjct: 425 RYGEKVVKMLTVQYRMHEAIMQWASSEMYGGRLTAHPSVAQHLLKD--LPGVTCTEETTI 482
Query: 119 PYSFINVFG-GREEFI---EHSCRNMVEVSVVMKILRNLYKAWVESKEKLSIGIVSPYSA 174
P I+ G G E E S N EV +V ++ L A V++++ + +V+PY+
Sbjct: 483 PLLLIDTAGCGLLELEVEDEQSKGNPGEVQLVGLHIQALVDAGVKARD---VAVVAPYNL 539
Query: 175 QVIAIQEKLGSKYEKIAGFAVKVKSIDGFQGGEEDIIIISTVRSNNTGSIGFASTPQRIN 234
QV ++E L +Y ++ ++KS+DGFQG E++ +I+S VRSN G +GF + +RIN
Sbjct: 540 QVDMLREHLCHRYPEL-----EIKSVDGFQGREKEAVILSFVRSNRKGEVGFLAEDRRIN 594
Query: 235 VALTRARHCLWILGSERTLNHSESVWESLLD 265
VA+TRAR + I+ RT+ S++ LL+
Sbjct: 595 VAVTRARRHVAIICDSRTVG-SQAFLGRLLE 624
Score = 45 (20.9 bits), Expect = 1.3e-19, Sum P(2) = 1.3e-19
Identities = 11/38 (28%), Positives = 21/38 (55%)
Query: 1911 CKGKSLETGVASAGNVNVENTDSNADECSGSHEGKIIP 1948
CKG+SL + +++A V +NT + + G++ P
Sbjct: 860 CKGRSLTSXISAA--VKADNTAGLPAKPASQTLGQLCP 895
>MGI|MGI:99954 [details] [associations]
symbol:Ighmbp2 "immunoglobulin mu binding protein 2"
species:10090 "Mus musculus" [GO:0000049 "tRNA binding"
evidence=ISO] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=ISO] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0001078 "RNA polymerase II
core promoter proximal region sequence-specific DNA binding
transcription factor activity involved in negative regulation of
transcription" evidence=ISO] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=ISO] [GO:0003723
"RNA binding" evidence=ISO] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=ISO] [GO:0005634
"nucleus" evidence=ISO;IDA] [GO:0005737 "cytoplasm"
evidence=ISO;IDA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006412 "translation"
evidence=NAS] [GO:0008094 "DNA-dependent ATPase activity"
evidence=ISO] [GO:0008134 "transcription factor binding"
evidence=ISO] [GO:0008186 "RNA-dependent ATPase activity"
evidence=ISO] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0021522
"spinal cord motor neuron differentiation" evidence=IMP]
[GO:0030424 "axon" evidence=IDA] [GO:0030426 "growth cone"
evidence=IDA] [GO:0030529 "ribonucleoprotein complex" evidence=IDA]
[GO:0032575 "ATP-dependent 5'-3' RNA helicase activity"
evidence=ISO] [GO:0042995 "cell projection" evidence=IEA]
[GO:0043022 "ribosome binding" evidence=ISO;IDA] [GO:0043025
"neuronal cell body" evidence=IDA] [GO:0043141 "ATP-dependent 5'-3'
DNA helicase activity" evidence=ISO] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IDA] [GO:0051260 "protein homooligomerization"
evidence=ISO] InterPro:IPR000058 InterPro:IPR001374
InterPro:IPR003593 InterPro:IPR004483 InterPro:IPR026853
Pfam:PF01424 PROSITE:PS51039 PROSITE:PS51061 SMART:SM00154
SMART:SM00382 SMART:SM00393 MGI:MGI:99954 GO:GO:0005524
GO:GO:0005634 GO:GO:0048471 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0006412 GO:GO:0030424 GO:GO:0043025
GO:GO:0008270 GO:GO:0051260 GO:GO:0006351 GO:GO:0043621
GO:GO:0043022 GO:GO:0030426 GO:GO:0021522 GO:GO:0030529
GO:GO:0000049 eggNOG:COG1112 InterPro:IPR014001 SMART:SM00487
GO:GO:0043141 HOGENOM:HOG000185831 TIGRFAMs:TIGR00376
Gene3D:4.10.1110.10 GO:GO:0032575 HOVERGEN:HBG077019
OrthoDB:EOG4GHZNJ PANTHER:PTHR10887:SF23 EMBL:L10075
IPI:IPI00113033 PIR:S35633 UniGene:Mm.3179
ProteinModelPortal:P40694 SMR:P40694 IntAct:P40694 STRING:P40694
PhosphoSite:P40694 PaxDb:P40694 PRIDE:P40694 UCSC:uc008fwa.1
InParanoid:P40694 CleanEx:MM_IGHMBP2 Genevestigator:P40694
GermOnline:ENSMUSG00000024831 Uniprot:P40694
Length = 993
Score = 293 (108.2 bits), Expect = 1.3e-19, Sum P(2) = 1.3e-19
Identities = 92/287 (32%), Positives = 148/287 (51%)
Query: 7 VVIDEAAQLKESESAIPL-QLPCIQHAILVGDEVQLPAMVESSVSGEAYFGRSLFERLS- 64
VV+DE AQ E+ IPL + P IL GD QLP S + A RSL ERL+
Sbjct: 371 VVVDECAQALEASCWIPLLKAP---KCILAGDHRQLPPTTVSHRAALAGLSRSLMERLAE 427
Query: 65 -YLGHPKHLLSMQYRMHPSISFFPNSYFYENKIRDAPTVRKRSYEKRFLPG-----PMYG 118
+ +L++QYRMH +I + + Y + P+V + + LPG
Sbjct: 428 KHGAGVVRMLTVQYRMHQAIMCWASEAMYHGQFTSHPSVA--GHLLKDLPGVTDTEETRV 485
Query: 119 PYSFINVFG-GREEFIEHSCR---NMVEVSVVMKILRNLYKAWVESKEKLSIGIVSPYSA 174
P I+ G G E E + N EV +V ++ L A V++ + I +++PY+
Sbjct: 486 PLLLIDTAGCGLLELEEEDSQSKGNPGEVRLVTLHIQALVDAGVQAGD---IAVIAPYNL 542
Query: 175 QVIAIQEKLGSKYEKIAGFAVKVKSIDGFQGGEEDIIIISTVRSNNTGSIGFASTPQRIN 234
QV +++ L +K+ ++ ++KS+DGFQG E++ ++++ VRSN G +GF + +RIN
Sbjct: 543 QVDLLRQSLSNKHPEL-----EIKSVDGFQGREKEAVLLTFVRSNRKGEVGFLAEDRRIN 597
Query: 235 VALTRAR-HCLWILGSERTLNHS--ESVWESLLDDAKARQCFFNIDE 278
VA+TRAR H I S NH+ E++ + + + R F +D+
Sbjct: 598 VAVTRARRHVAVICDSHTVNNHAFLETLVDYFTEHGEVRTAFEYLDD 644
Score = 38 (18.4 bits), Expect = 1.3e-19, Sum P(2) = 1.3e-19
Identities = 11/31 (35%), Positives = 17/31 (54%)
Query: 819 KRLLVQVRQLDDSLAQAMQVASSPEEWKSRG 849
KR +Q R+LD L + +S ++ K RG
Sbjct: 963 KRAQLQ-RRLDKKLGELSSQRTSRKKEKERG 992
>UNIPROTKB|Q9BYK8 [details] [associations]
symbol:HELZ2 "Helicase with zinc finger domain 2"
species:9606 "Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0004540 "ribonuclease activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0003713 "transcription coactivator activity"
evidence=NAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0030374 "ligand-dependent
nuclear receptor transcription coactivator activity" evidence=IDA]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0044255 "cellular lipid
metabolic process" evidence=TAS] [GO:0044281 "small molecule
metabolic process" evidence=TAS] Reactome:REACT_111217
InterPro:IPR001900 InterPro:IPR003593 InterPro:IPR015880
InterPro:IPR026855 Pfam:PF00773 PROSITE:PS00028 PROSITE:PS50157
SMART:SM00355 SMART:SM00382 SMART:SM00955 GO:GO:0005524
Reactome:REACT_111045 GO:GO:0005654 GO:GO:0044281 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0045944 GO:GO:0044255
GO:GO:0006351 GO:GO:0003723 GO:GO:0004386 GO:GO:0004540
GO:GO:0030374 eggNOG:COG0557 InterPro:IPR022966 EMBL:AL121829
EMBL:AF517673 EMBL:AB201715 EMBL:AB051556 EMBL:AK074171
EMBL:AK055611 IPI:IPI00249304 IPI:IPI00249305 IPI:IPI00736631
RefSeq:NP_001032412.2 RefSeq:NP_208384.3 UniGene:Hs.517180
ProteinModelPortal:Q9BYK8 IntAct:Q9BYK8 STRING:Q9BYK8
PhosphoSite:Q9BYK8 DMDM:209572784 PaxDb:Q9BYK8 PRIDE:Q9BYK8
GeneID:85441 KEGG:hsa:85441 UCSC:uc002yfl.1 UCSC:uc002yfm.2
CTD:85441 GeneCards:GC20M062189 HGNC:HGNC:30021 HPA:HPA051267
MIM:611265 neXtProt:NX_Q9BYK8 HOGENOM:HOG000231856
HOVERGEN:HBG080465 InParanoid:Q9BYK8 OMA:FRAAHIM PhylomeDB:Q9BYK8
GenomeRNAi:85441 NextBio:76020 ArrayExpress:Q9BYK8 Bgee:Q9BYK8
Genevestigator:Q9BYK8 GermOnline:ENSG00000130589
PANTHER:PTHR10887:SF16 Uniprot:Q9BYK8
Length = 2649
Score = 276 (102.2 bits), Expect = 4.3e-19, P = 4.3e-19
Identities = 94/286 (32%), Positives = 140/286 (48%)
Query: 7 VVIDEAAQLKESESAIPL-QLPCIQHAILVGDEVQLPAMVESSVSGEAYFGRSLFERLSY 65
+++DEA E E+ IPL Q P + +L+GD QL +V++ RSLFER
Sbjct: 2357 ILVDEAGMATEPETLIPLVQFPQAEKVVLLGDHKQLRPVVKNERLQNLGLDRSLFERYH- 2415
Query: 66 LGHPKHLLSMQYRMHPSISFFPNSYFYENKIRDAPTVRKRSYEKRFLPGPMYGPYSFINV 125
H+L QYRMH I FP+ FY++K++ +R R G P F +V
Sbjct: 2416 --EDAHMLDTQYRMHEGICAFPSVAFYKSKLKTWQGLR-RPPSVLGHAGKESCPVIFGHV 2472
Query: 126 FGGREEFI-------EHSCRNMVEVSVVMKILRNLYKAWVESKEKLSIGIVSPYSAQVIA 178
G + E+S N+ EV+ V++I + L + E I +++PY+AQ
Sbjct: 2473 QGHERSLLVSTDEGNENSKANLEEVAEVVRITKQLTLG--RTVEPQDIAVLTPYNAQASE 2530
Query: 179 IQEKLGSKYEKIAGFAVKVKSIDGFQGGEEDIIIISTVRS--------NNTGS-----IG 225
I + L + E IAG AV SI QG E +++STVR+ T S +G
Sbjct: 2531 ISKAL--RREGIAGVAVS--SITKSQGSEWRYVLVSTVRTCAKSDLDQRPTKSWLKKFLG 2586
Query: 226 FASTPQRINVALTRARHCLWILGSERTLNHSESVWESLLDDAKARQ 271
F P ++NVA+TRA+ L ++G L +W SLLD +A+Q
Sbjct: 2587 FVVDPNQVNVAVTRAQEGLCLIGDHLLLRCCP-LWRSLLDFCEAQQ 2631
>TAIR|locus:2200996 [details] [associations]
symbol:SDE3 "SILENCING DEFECTIVE" species:3702
"Arabidopsis thaliana" [GO:0005737 "cytoplasm" evidence=ISM]
[GO:0003724 "RNA helicase activity" evidence=ISS] [GO:0009616
"virus induced gene silencing" evidence=IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0035194 "posttranscriptional gene
silencing by RNA" evidence=IMP] InterPro:IPR026127 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0005737
eggNOG:COG1112 EMBL:AC005106 GO:GO:0003724 GO:GO:0035194
GO:GO:0009616 HOGENOM:HOG000239755 EMBL:AF339908 EMBL:AK117698
IPI:IPI00521883 PIR:C86189 RefSeq:NP_172037.1 UniGene:At.15329
UniGene:At.42398 ProteinModelPortal:Q8GYD9 SMR:Q8GYD9 STRING:Q8GYD9
PaxDb:Q8GYD9 PRIDE:Q8GYD9 EnsemblPlants:AT1G05460.1 GeneID:837047
KEGG:ath:AT1G05460 GeneFarm:2423 TAIR:At1g05460 InParanoid:Q8GYD9
OMA:DEREGNN PhylomeDB:Q8GYD9 ProtClustDB:CLSN2682016
Genevestigator:Q8GYD9 GermOnline:AT1G05460 PANTHER:PTHR10887:SF165
Uniprot:Q8GYD9
Length = 1002
Score = 264 (98.0 bits), Expect = 2.3e-18, P = 2.3e-18
Identities = 88/279 (31%), Positives = 137/279 (49%)
Query: 7 VVIDEAAQLKESESAIPLQLPCIQHAILV--GDEVQLPAMVESSVSGEAYFGRSLFERL- 63
+++DEA Q E E+ I + C+ ++V GD QL ++ S + G+S ERL
Sbjct: 542 ILLDEAGQASEPENMIAVSNLCLTETVVVLAGDPRQLGPVIYSRDAESLGLGKSYLERLF 601
Query: 64 --SYL--GHPKHLLSM--QYRMHPSISFFPNSYFYENKI----RDAPTVRKRSYEKRFLP 113
Y G ++ + YR HP I P+ FY+ ++ D +V FLP
Sbjct: 602 ECDYYCEGDENYVTKLVKNYRCHPEILDLPSKLFYDGELVASKEDTDSVLA---SLNFLP 658
Query: 114 GPMYGPYSFINVFGGRE-EFIEHSCRNMVEVSVVMKILRNLYKAWVESKEKLSIGIVSPY 172
+ P F + G E E S N +E+S V++ ++ L +E IG+++PY
Sbjct: 659 NKEF-PMVFYGIQGCDEREGNNPSWFNRIEISKVIETIKRLTANDCVQEE--DIGVITPY 715
Query: 173 SAQVIAIQEKLGSKYEKIAGFAVKVKSIDGFQGGEEDIIIISTVRS-------NNTGSIG 225
QV+ I+E L +++ VKV S++ FQG E+ +IIISTVRS + +G
Sbjct: 716 RQQVMKIKEVL----DRLDMTEVKVGSVEQFQGQEKQVIIISTVRSTIKHNEFDRAYCLG 771
Query: 226 FASTPQRINVALTRARHCLWILGSERTLNHSESVWESLL 264
F S P+R NVA+TRA L I+G+ + + W LL
Sbjct: 772 FLSNPRRFNVAITRAISLLVIIGNPHIICKDMN-WNKLL 809
>DICTYBASE|DDB_G0271732 [details] [associations]
symbol:DDB_G0271732 "AN1-type zinc finger-containing
protein" species:44689 "Dictyostelium discoideum" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0032508 "DNA duplex unwinding"
evidence=ISS] [GO:0003678 "DNA helicase activity" evidence=ISS]
InterPro:IPR000058 InterPro:IPR001374 InterPro:IPR003593
InterPro:IPR004483 Pfam:PF01424 Pfam:PF01428 PROSITE:PS51061
SMART:SM00382 dictyBase:DDB_G0271732 GO:GO:0005524 GO:GO:0003677
GO:GO:0008270 EMBL:AAFI02000006 eggNOG:COG1112 InterPro:IPR014001
SMART:SM00487 GO:GO:0003678 TIGRFAMs:TIGR00376 Gene3D:4.10.1110.10
OMA:HARQRIS RefSeq:XP_645520.1 ProteinModelPortal:Q75JA0
PRIDE:Q75JA0 EnsemblProtists:DDB0232283 GeneID:8618149
KEGG:ddi:DDB_G0271732 InParanoid:Q75JA0 ProtClustDB:CLSZ2846906
Uniprot:Q75JA0
Length = 1024
Score = 261 (96.9 bits), Expect = 5.0e-18, P = 5.0e-18
Identities = 84/269 (31%), Positives = 133/269 (49%)
Query: 1 MEQLKFVVIDEAAQLKESESAIPLQLPCIQHAILVGDEVQLPAMVESSVSGEAYFGRSLF 60
++ +VVIDE AQ E+ IP+Q +L GD QLP + S + + +LF
Sbjct: 415 IDNFDWVVIDECAQALEASCWIPIQKG--NKLLLAGDHQQLPPTIHSMEAAKMGLSITLF 472
Query: 61 ERL--SYLGHPKHLLSMQYRMHPSISFFPNSYFYENKIRDAPTVRKRSYEKRFLPG---- 114
ER+ Y LL++QYRM+ I + + FY +K+ +V P
Sbjct: 473 ERIIKQYGDQVSRLLNVQYRMNHKIMDWSSMEFYNSKMIADKSVSNHLLVTGDSPKIRNT 532
Query: 115 -PMYGPYSFINVFG-GREEFIE---HSCRNMVEVSVVMKILRNLYKAWVESKEKLSIGIV 169
P I+ G EE + S N EV VV + + L + V+ + IG++
Sbjct: 533 LTTTCPLLMIDTSGCDMEESQDDEGESKFNNGEVIVVKRHIEKLIECGVKPND---IGVI 589
Query: 170 SPYSAQVIAIQEKLGSKYEKIAGFAVKVKSIDGFQGGEEDIIIISTVRSNNTG--SIGFA 227
+PY+ QV ++ L KY ++++ ++DGFQG E+D+IIIS VRSN +GF
Sbjct: 590 TPYNGQVKLLKSYLSKKYS-----SMEIGTVDGFQGREKDVIIISMVRSNTDAPHKVGFL 644
Query: 228 STPQRINVALTRAR-HCLWILGSERTLNH 255
+ +R NVA+TRAR H + + ++ +H
Sbjct: 645 TEDRRTNVAITRARKHVVVVCDTDTISSH 673
>TAIR|locus:2162858 [details] [associations]
symbol:AT5G35970 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0009507 "chloroplast" evidence=ISM;IDA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0009941
"chloroplast envelope" evidence=IDA] [GO:0009570 "chloroplast
stroma" evidence=IDA] [GO:0015996 "chlorophyll catabolic process"
evidence=RCA] EMBL:CP002688 GO:GO:0009570 GO:GO:0003677
GO:GO:0009941 InterPro:IPR014001 SMART:SM00487 IPI:IPI00520082
RefSeq:NP_198446.3 UniGene:At.45828 ProteinModelPortal:F4K1G7
SMR:F4K1G7 PRIDE:F4K1G7 EnsemblPlants:AT5G35970.1 GeneID:833589
KEGG:ath:AT5G35970 OMA:DHFQREL Uniprot:F4K1G7
Length = 961
Score = 257 (95.5 bits), Expect = 1.2e-17, P = 1.2e-17
Identities = 93/275 (33%), Positives = 138/275 (50%)
Query: 1 MEQLKFVVIDEAAQLKESESAIPLQLPCIQHAILVGDEVQLPAMVESSVSGEAYFGRSLF 60
+E VVIDEA Q E IP+ + IL GD QL +V S + E G SL
Sbjct: 659 LETFDLVVIDEAGQSIEPSCWIPILQG--KRCILSGDPCQLAPVVLSRKALEGGLGVSLL 716
Query: 61 ERLSYLGHPKHL---LSMQYRMHPSISFFPNSYFYENKIRDAPTVRKRSY-EKRFLPG-- 114
ER + L H L L+ QYRM+ I+ + + Y ++ AP+V + F+
Sbjct: 717 ERAASL-HDGVLATKLTTQYRMNDVIAGWASKEMYGGWLKSAPSVASHLLIDSPFVKATW 775
Query: 115 ----PMY-----GPYSFINVFGGREEFIEH----SCRNMVEVSVVMKILRNLYKAWVESK 161
P+ PY ++V G EE ++ S N E +V+ + +L A V
Sbjct: 776 ITQCPLVLLDTRMPYGSLSV--GCEERLDPAGTGSLYNEGEADIVVNHVISLIYAGVSP- 832
Query: 162 EKLSIGIVSPYSAQVIAIQEKLGSKYEKIAGFAVKVKSIDGFQGGEEDIIIISTVRSNNT 221
++I + SPY AQV ++E+L + G V+V +ID FQG E D +IIS VRSNN
Sbjct: 833 --MAIAVQSPYVAQVQLLRERLDD-FPVADG--VEVATIDSFQGREADAVIISMVRSNNL 887
Query: 222 GSIGFASTPQRINVALTRARHCLWILGSERTLNHS 256
G++GF +R+NVA+TRAR + ++ T+ H+
Sbjct: 888 GAVGFLGDSRRMNVAITRARKHVAVVCDSSTICHN 922
>UNIPROTKB|E2RBM4 [details] [associations]
symbol:PRIC285 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0004540
"ribonuclease activity" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR000571 InterPro:IPR001900 InterPro:IPR003593
InterPro:IPR026855 Pfam:PF00773 PROSITE:PS50103 SMART:SM00382
SMART:SM00955 GO:GO:0005524 GO:GO:0008270 GO:GO:0003723
GO:GO:0004386 GO:GO:0004540 InterPro:IPR022966 PROSITE:PS01175
PANTHER:PTHR10887:SF16 GeneTree:ENSGT00550000074391
EMBL:AAEX03014158 Ensembl:ENSCAFT00000020582 OMA:RCQYAHS
Uniprot:E2RBM4
Length = 2919
Score = 257 (95.5 bits), Expect = 5.1e-17, P = 5.1e-17
Identities = 94/291 (32%), Positives = 143/291 (49%)
Query: 7 VVIDEAAQLKESESAIPL-QLPCIQHAILVGDEVQLPAMVESSVSGEAYFGRSLFERLSY 65
++IDEA E E+ IPL + +L+GD QL +V++ RSLFER
Sbjct: 2627 ILIDEAGMATEPETLIPLVAFSKAEKVVLLGDHKQLRPVVKNEQLQNLGLDRSLFERYHV 2686
Query: 66 LGHPKHLLSMQYRMHPSISFFPNSYFYENKIRDAPTVRKRSYEKRFLPGPMYGPYSFINV 125
H+L QYRMH I FP+ FYE K++ +R+ + G + G S +
Sbjct: 2687 ---DAHMLDTQYRMHEGICAFPSMEFYEKKLKTWQGLRRPPS----ILGHI-GKESCSVI 2738
Query: 126 FG---GREEFI--------EHSCRNMVEVSVVMKILRNLYKA-WVESKEKLSIGIVSPYS 173
FG G E+ + E+S N EV+ V++I + L VE K+ + I++PY+
Sbjct: 2739 FGHVQGHEQSLLVSTDEGNENSKANPEEVAAVVRIAKQLTLGRTVEPKD---VAILTPYN 2795
Query: 174 AQVIAIQEKLGSKYEKIAGFAVKVKSIDGFQGGEEDIIIISTVRS--------NNTGS-- 223
AQ I ++L E ++G V V SI QG E +++STVR+ T S
Sbjct: 2796 AQAAEISKRLVR--EGVSG--VTVCSITKSQGSEWRYVLVSTVRTCQESDLDQRPTKSWL 2851
Query: 224 ---IGFASTPQRINVALTRARHCLWILGSERTLNHSESVWESLLDDAKARQ 271
+GF P ++NVA+TRAR L ++G R L+ +W LD +A++
Sbjct: 2852 KRFLGFVVDPNQVNVAITRAREGLCVIGDHRLLSCCP-LWRRFLDFCEAQR 2901
Score = 180 (68.4 bits), Expect = 9.5e-07, Sum P(2) = 9.5e-07
Identities = 77/281 (27%), Positives = 130/281 (46%)
Query: 7 VVIDEAAQLKESESAIPLQLPCI-QHAILVGDEVQLPAMVESSVSGEAYFGRSLFERL-S 64
++IDEAAQ+ E E+ PL+ +L GD +Q+ + S +A G +L RL
Sbjct: 911 ILIDEAAQMLECEALTPLRYAAPGTRVVLAGDHMQVTPRLFSVPRAQAA-GHTLLYRLFQ 969
Query: 65 YLGHPKH--------LLSMQYRMHPSISFFPNSYFYENKIRDAPTVRKRSYEKRFLPGPM 116
+ H + YR +I F + +FY K +P R P P
Sbjct: 970 HYQREAHEVAQRSRLIFHQNYRSTEAILSFVSRHFYVAK--GSPI----HASGRVPPHPR 1023
Query: 117 YGPYSFINVFGGREEFIEH-SCRNMVEVSVVMKILRNLYKAWVE---SKEKLSIGIVSPY 172
P F +V G E + S N EV+ V++ +R+L+ W ++E+ I +VS +
Sbjct: 1024 LHPLMFCHVAGNPERDLSSTSWLNAAEVAQVVEQVRDLHDGWPSCWGAREQKHICVVS-H 1082
Query: 173 SAQVIAIQEKLGSKYEKIAGFAVKVKSIDGFQGGEEDIIIISTVR------SNNTGSIGF 226
AQV A++++L + G V V S + G E ++++STV S+ T S+GF
Sbjct: 1083 GAQVTALRQELRKRN---LG-QVSVGSFEILPGREFRVVVLSTVHNHHSLLSSGTASLGF 1138
Query: 227 ASTPQRINVALTRARHCLWILGSERTLNHS---ESVWESLL 264
+ + +N +TRA+ + +G+ L S +W+S +
Sbjct: 1139 FTDARVLNTIMTRAQSQVVAVGNALALCSSGACSKLWKSFI 1179
Score = 40 (19.1 bits), Expect = 9.5e-07, Sum P(2) = 9.5e-07
Identities = 7/15 (46%), Positives = 10/15 (66%)
Query: 1175 RHQSICGETLSARKI 1189
+H S+C E+LS I
Sbjct: 1184 KHHSVCPESLSLEHI 1198
Score = 40 (19.1 bits), Expect = 2.9e-05, Sum P(3) = 2.9e-05
Identities = 12/32 (37%), Positives = 16/32 (50%)
Query: 528 TFILGRSGTGKTTILTMKLFQNEKHHRMAKEQ 559
T I G GTGKT + +F H+ +EQ
Sbjct: 2440 TVIQGPPGTGKTVVAFHIVFW---FHKSNEEQ 2468
Score = 39 (18.8 bits), Expect = 2.9e-05, Sum P(3) = 2.9e-05
Identities = 7/20 (35%), Positives = 13/20 (65%)
Query: 249 SERTLNHSESVWESLLDDAK 268
S+ LN +S+ + LLD+ +
Sbjct: 1299 SDTELNADDSILQELLDEGR 1318
>CGD|CAL0006154 [details] [associations]
symbol:orf19.6199 species:5476 "Candida albicans" [GO:0043141
"ATP-dependent 5'-3' DNA helicase activity" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0005658 "alpha DNA
polymerase:primase complex" evidence=IEA] [GO:0033203 "DNA helicase
A complex" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR003593 InterPro:IPR004483 SMART:SM00382
CGD:CAL0006154 GO:GO:0005524 GO:GO:0003677 GO:GO:0017111
eggNOG:COG1112 InterPro:IPR014001 SMART:SM00487 EMBL:AACQ01000038
EMBL:AACQ01000037 TIGRFAMs:TIGR00376 RefSeq:XP_718706.1
RefSeq:XP_718790.1 ProteinModelPortal:Q5AAW1 STRING:Q5AAW1
GeneID:3639532 GeneID:3639630 KEGG:cal:CaO19.13579
KEGG:cal:CaO19.6199 Uniprot:Q5AAW1
Length = 719
Score = 249 (92.7 bits), Expect = 5.3e-17, P = 5.3e-17
Identities = 77/245 (31%), Positives = 130/245 (53%)
Query: 47 SSVSGEAYFGRSLFERLSYLGHP---KHLLSMQYRMHPSISFFPNSYFYENKIRDAPTVR 103
SS S + +LF+RL H K LL +QYRM+ SI FP+ Y+N+++ +VR
Sbjct: 459 SSSSSASILATTLFDRLMKHCHGEKYKKLLDVQYRMNKSIMQFPSMQLYDNQLKCDDSVR 518
Query: 104 KRSYEKRFLPGPMYGPYSFINVF-----GGR--EEFIEH----SCRNMVEVSVVMKILRN 152
+ S LPG + GG E+ E S N +E+ VV ++
Sbjct: 519 EISLVD--LPGVEINDDTMTKCIWYDTQGGEFPEQISESIDGDSKYNDMELLVVKGHIKK 576
Query: 153 LYKAWVESKEKLSIGIVSPYSAQVIAIQEKLGSKYEKIAGFA-------VKVKSIDGFQG 205
L + V+ ++ IG+++PYSAQV +++++G E + A +++ ++DGFQG
Sbjct: 577 LLSSGVQPQD---IGVIAPYSAQVQNLKKQMGLGGE-VGSSANGDKDGQIEISTVDGFQG 632
Query: 206 GEEDIIIISTVRSNNTGSIGFASTPQRINVALTRARHCLWILGSERTLNHSESV----WE 261
E+++II++ VRSN++ IGF S +R+NVA+TR + L ++G +N S + W
Sbjct: 633 REKEVIILTLVRSNDSREIGFLSEQRRLNVAMTRPKRQLCVVGDLELMNQSGNKFLQSWS 692
Query: 262 SLLDD 266
++D
Sbjct: 693 KFVED 697
>UNIPROTKB|Q5AAW1 [details] [associations]
symbol:HCS1 "Putative uncharacterized protein HCS1"
species:237561 "Candida albicans SC5314" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR003593
InterPro:IPR004483 SMART:SM00382 CGD:CAL0006154 GO:GO:0005524
GO:GO:0003677 GO:GO:0017111 eggNOG:COG1112 InterPro:IPR014001
SMART:SM00487 EMBL:AACQ01000038 EMBL:AACQ01000037
TIGRFAMs:TIGR00376 RefSeq:XP_718706.1 RefSeq:XP_718790.1
ProteinModelPortal:Q5AAW1 STRING:Q5AAW1 GeneID:3639532
GeneID:3639630 KEGG:cal:CaO19.13579 KEGG:cal:CaO19.6199
Uniprot:Q5AAW1
Length = 719
Score = 249 (92.7 bits), Expect = 5.3e-17, P = 5.3e-17
Identities = 77/245 (31%), Positives = 130/245 (53%)
Query: 47 SSVSGEAYFGRSLFERLSYLGHP---KHLLSMQYRMHPSISFFPNSYFYENKIRDAPTVR 103
SS S + +LF+RL H K LL +QYRM+ SI FP+ Y+N+++ +VR
Sbjct: 459 SSSSSASILATTLFDRLMKHCHGEKYKKLLDVQYRMNKSIMQFPSMQLYDNQLKCDDSVR 518
Query: 104 KRSYEKRFLPGPMYGPYSFINVF-----GGR--EEFIEH----SCRNMVEVSVVMKILRN 152
+ S LPG + GG E+ E S N +E+ VV ++
Sbjct: 519 EISLVD--LPGVEINDDTMTKCIWYDTQGGEFPEQISESIDGDSKYNDMELLVVKGHIKK 576
Query: 153 LYKAWVESKEKLSIGIVSPYSAQVIAIQEKLGSKYEKIAGFA-------VKVKSIDGFQG 205
L + V+ ++ IG+++PYSAQV +++++G E + A +++ ++DGFQG
Sbjct: 577 LLSSGVQPQD---IGVIAPYSAQVQNLKKQMGLGGE-VGSSANGDKDGQIEISTVDGFQG 632
Query: 206 GEEDIIIISTVRSNNTGSIGFASTPQRINVALTRARHCLWILGSERTLNHSESV----WE 261
E+++II++ VRSN++ IGF S +R+NVA+TR + L ++G +N S + W
Sbjct: 633 REKEVIILTLVRSNDSREIGFLSEQRRLNVAMTRPKRQLCVVGDLELMNQSGNKFLQSWS 692
Query: 262 SLLDD 266
++D
Sbjct: 693 KFVED 697
>FB|FBgn0033889 [details] [associations]
symbol:CG6701 species:7227 "Drosophila melanogaster"
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] InterPro:IPR007087 InterPro:IPR015880
PROSITE:PS00028 SMART:SM00355 GO:GO:0008270 GO:GO:0005622
FlyBase:FBgn0033889 ChiTaRS:CG6701 EMBL:AY128442
ProteinModelPortal:Q8MQQ9 STRING:Q8MQQ9 PRIDE:Q8MQQ9
InParanoid:Q8MQQ9 ArrayExpress:Q8MQQ9 Bgee:Q8MQQ9 Uniprot:Q8MQQ9
Length = 1261
Score = 250 (93.1 bits), Expect = 1.0e-16, P = 1.0e-16
Identities = 89/285 (31%), Positives = 142/285 (49%)
Query: 7 VVIDEAAQLKESE--SAIPLQLPCIQHAILVGDEVQLPAMVESSVSGEAYFGRSLFERL- 63
V +DEAA E+E I L + IL GD QL +++S + E G +LFERL
Sbjct: 690 VFVDEAAASTEAEVLMGITCTLSPTLNLILSGDHKQLGPVLQSQRANEWGLGLTLFERLL 749
Query: 64 -----------SYLGHPKHLLSMQYRMHPSISFFPNSYFYENKIR-DAPT-VRKRSYEKR 110
SY + L +R HP I N+ +YE +R +AP + R +
Sbjct: 750 QRKCYQVEEDGSYNASVQTRLIRNFRSHPEIVSLYNNMYYEGHLRTEAPMEIVCRFHNWF 809
Query: 111 FLPGPMYGPYSFINVFGG--REEFIEHSCRNMVEVSVVMKILRNLYKAWVESKEKLS--I 166
+LP + P F +VFG + C N E+ VVM +++L + ++ L I
Sbjct: 810 YLPNATF-PIMFHSVFGTTMNTKSSVSLCNNK-EIDVVMDYVKDLMYFGLNGEKLLQTDI 867
Query: 167 GIVSPYSAQVIAIQEKLGSKYEKIAGFAVKVKSIDGFQGGEEDIIIISTVRSNNTGSIGF 226
GI+SPY Q IQE+L + + S++ FQG E+ +II+S VRS T +GF
Sbjct: 868 GIISPYKNQYQRIQEQLNMRNWS----QIDCGSVELFQGKEKHVIIVSFVRSF-TPKLGF 922
Query: 227 ASTPQRINVALTRARHCLWILGSERTLNHSESVWESLLDDAKARQ 271
+ +R+NV L+R L ++G+ RTL+ + S ++ +++ + R+
Sbjct: 923 LNNERRLNVLLSRPISLLILIGNPRTLSQN-SDFQHIIEMCRNRK 966
>ZFIN|ZDB-GENE-070424-144 [details] [associations]
symbol:si:ch211-183d5.1 "si:ch211-183d5.1"
species:7955 "Danio rerio" [GO:0004386 "helicase activity"
evidence=IEA] InterPro:IPR026855 ZFIN:ZDB-GENE-070424-144
GO:GO:0004386 PANTHER:PTHR10887:SF16 GeneTree:ENSGT00550000074391
EMBL:AL935128 IPI:IPI00492493 Ensembl:ENSDART00000144897
Uniprot:F1QAI5
Length = 517
Score = 243 (90.6 bits), Expect = 1.1e-16, P = 1.1e-16
Identities = 94/302 (31%), Positives = 137/302 (45%)
Query: 7 VVIDEAAQLKESESAIPLQLPCIQHAILVGDEVQLPAMVESSVSGEAYFGRSLFERLSYL 66
++IDE A E E+ IPL Q +L+GD Q+ +V+ +SLFER L
Sbjct: 203 ILIDECAMATEPEAFIPLVSHNPQQIVLLGDHQQIRPIVQCGHVKNKGMEKSLFERYMDL 262
Query: 67 GHPKHLLSMQYRMHPSISFFPNSYFYENKIRDA----PT--VRKRSYEKRFLPGPMYGPY 120
+ +L QYRMH I FP+ FY+ K++ P + K L G + G
Sbjct: 263 AN---MLDTQYRMHAEICSFPSDEFYDGKLKTGAERGPCCLLNKSKEPTAMLFGHIEGKE 319
Query: 121 SFINVFGGREEFIEHSCRNMVEVSVVMKILRNLYKAWVESKEKLSIGIVSPYSAQVIAIQ 180
+++ E+ E+S N E + + L K S E I I++PY+AQV I+
Sbjct: 320 --VSLVVSTEKGNENSMANTEEAEQAVCVADLLIKQSGVSPEH--IAILTPYNAQVSEIK 375
Query: 181 EKLGSKYEKIAGFAVKVKSIDGFQGGEEDIIIISTVRSNNTGSI---------------- 224
L K + +KS QG E +I+STVRS +T I
Sbjct: 376 MTLEKKNVRNVTVCTVMKS----QGSEWPYVIVSTVRSCSTSDIQAYRVRPHKAWLGKRL 431
Query: 225 GFASTPQRINVALTRARHCLWILGSERTLNHSESVWESLLDDAKARQCFFNIDED-KDLA 283
GF + ++NVA+TRA+ L ILG+ L E +W+ LLD + C N D + A
Sbjct: 432 GFVTDANQVNVAITRAQDGLCILGNSDLLRCCE-LWDRLLDHYYRKSCVVNPASDIRVKA 490
Query: 284 KA 285
KA
Sbjct: 491 KA 492
>UNIPROTKB|Q9P2E3 [details] [associations]
symbol:ZNFX1 "NFX1-type zinc finger-containing protein 1"
species:9606 "Homo sapiens" [GO:0046872 "metal ion binding"
evidence=IEA] Pathway_Interaction_DB:telomerasepathway
GO:GO:0046872 eggNOG:COG1112 EMBL:AL049766 EMBL:AB037825
EMBL:AK000573 EMBL:AK002139 EMBL:AK022641 EMBL:AK023836
IPI:IPI00165981 IPI:IPI00220462 RefSeq:NP_066363.1
UniGene:Hs.371794 ProteinModelPortal:Q9P2E3 SMR:Q9P2E3
IntAct:Q9P2E3 STRING:Q9P2E3 PhosphoSite:Q9P2E3 DMDM:23821814
PaxDb:Q9P2E3 PeptideAtlas:Q9P2E3 PRIDE:Q9P2E3
Ensembl:ENST00000371752 Ensembl:ENST00000396105 GeneID:57169
KEGG:hsa:57169 UCSC:uc002xui.3 CTD:57169 GeneCards:GC20M047854
HGNC:HGNC:29271 HPA:HPA046629 neXtProt:NX_Q9P2E3
PharmGKB:PA143485687 HOVERGEN:HBG052201 InParanoid:Q9P2E3
OMA:CVRLCSE PhylomeDB:Q9P2E3 ChiTaRS:ZNFX1 GenomeRNAi:57169
NextBio:63185 ArrayExpress:Q9P2E3 Bgee:Q9P2E3 CleanEx:HS_ZNFX1
Genevestigator:Q9P2E3 GermOnline:ENSG00000124201 Uniprot:Q9P2E3
Length = 1918
Score = 251 (93.4 bits), Expect = 1.4e-16, P = 1.4e-16
Identities = 79/262 (30%), Positives = 139/262 (53%)
Query: 5 KFVVIDEAAQLKESESAIPLQLPCIQHAILVGDEVQL-PAMVESSVSGEAYFGRSLFERL 63
+ V+++EAA++ E+ + L C QH IL+GD QL P+ ++ SLFERL
Sbjct: 1001 RIVIVEEAAEVLEAHTIATLSKAC-QHLILIGDHQQLRPSANVYDLAKNFNLEVSLFERL 1059
Query: 64 SYLGHPKHLLSMQYRMHPSISFFPNSYFYENKIRDAPTVRKRSYEKRFLPGPMYGPYSFI 123
+ P L+ Q+RM P I+ + Y++ + + P+V K YEK + G +
Sbjct: 1060 VKVNIPFVRLNYQHRMCPEIARLLTPHIYQD-LENHPSVLK--YEK--IKGVSSNLFFVE 1114
Query: 124 NVFGGREEFIEHSCRNMVEVSVVMKILRN-LYKAWVESKEKLSIGIVSPYSAQVIAIQEK 182
+ F +E S +N E V+++ + L + ++ S+ I I++ Y+ Q+ +++
Sbjct: 1115 HNFPEQEIQEGKSHQNQHEAHFVVELCKYFLCQEYLPSQ----ITILTTYTGQLFCLRKL 1170
Query: 183 LGSKYEKIAGFAVKVKSIDGFQGGEEDIIIISTVRSNNTGSIGFASTPQRINVALTRARH 242
+ +K AG V+V +D +QG E DII++S VRSN G +GF RI VAL+RA+
Sbjct: 1171 MPAK--TFAG--VRVHVVDKYQGEENDIILLSLVRSNQEGKVGFLQISNRICVALSRAKK 1226
Query: 243 CLWILGSERTLNHSESVWESLL 264
++ +G+ + L +W ++
Sbjct: 1227 GMYCIGNMQMLA-KVPLWSKII 1247
>UNIPROTKB|F1RMM8 [details] [associations]
symbol:LOC100519780 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0045944 "positive regulation of transcription from
RNA polymerase II promoter" evidence=IEA] [GO:0030374
"ligand-dependent nuclear receptor transcription coactivator
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0004540
"ribonuclease activity" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR000571 InterPro:IPR001900 InterPro:IPR003593
InterPro:IPR026855 Pfam:PF00773 PROSITE:PS50103 SMART:SM00382
SMART:SM00955 GO:GO:0005524 GO:GO:0008270 GO:GO:0003723
GO:GO:0004386 GO:GO:0004540 InterPro:IPR022966 PROSITE:PS01175
OMA:FRAAHIM PANTHER:PTHR10887:SF16 GeneTree:ENSGT00550000074391
EMBL:FP102633 Ensembl:ENSSSCT00000003670 Uniprot:F1RMM8
Length = 2879
Score = 251 (93.4 bits), Expect = 2.2e-16, P = 2.2e-16
Identities = 85/289 (29%), Positives = 143/289 (49%)
Query: 4 LKFVVIDEAAQLKESESAIPL-QLPCIQHAILVGDEVQLPAMVESSVSGEAYFGRSLFER 62
++ +++DEA E E+ IPL ++ +L+GD QL +V+S RSL +R
Sbjct: 2586 IRQILVDEAGLASEPETLIPLVSFSQVEKVVLLGDHKQLRPVVKSEQLQNLGLDRSLLQR 2645
Query: 63 LSYLGHPKHLLSMQYRMHPSISFFPNSYFYENKIRDAPTVRKR----SYEKR---FLPGP 115
+L +QY +H SI FP+ FY+ K++ +R Y K + G
Sbjct: 2646 YR---RDASMLDLQYCVHESICAFPSMEFYKKKLKTWQGLRLPPSILGYGKENCSVIFGD 2702
Query: 116 MYGPYSFINVFGGREEFIEHSCRNMVEVSVVMKILRNLYKAWVESKEKLSIGIVSPYSAQ 175
+ P + V EE E+S N + ++V+ + + L V+ K+ + I++PY AQ
Sbjct: 2703 VQSPEESLVV--STEEGRENSKVNKEQAALVVCLAKQLVSGRVDPKD---MAILTPYHAQ 2757
Query: 176 VIAIQEKLGSKYEKIAGFAVKVKSIDGFQGGEEDIIIISTVRSNNTG------------- 222
V+ I ++L + ++AG V V SI QG + +++STVR+
Sbjct: 2758 VLEISKRL--EEARVAG--VTVCSITKSQGRQWRYVLVSTVRTCQESDLDLRPTKSWLQK 2813
Query: 223 SIGFASTPQRINVALTRARHCLWILGSERTLNHSESVWESLLDDAKARQ 271
S+GF P ++NVALTRA+ LW++G +R L +W LD +A++
Sbjct: 2814 SLGFLVDPNQVNVALTRAQEGLWVVG-DRLLLRCCPLWSRFLDFCEAQK 2861
>SGD|S000001500 [details] [associations]
symbol:HCS1 "Hexameric DNA polymerase alpha-associated DNA
helicase A" species:4932 "Saccharomyces cerevisiae" [GO:0003677
"DNA binding" evidence=IEA] [GO:0043141 "ATP-dependent 5'-3' DNA
helicase activity" evidence=IDA] [GO:0005658 "alpha DNA
polymerase:primase complex" evidence=IDA] [GO:0006273 "lagging
strand elongation" evidence=IC] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0033203 "DNA helicase A
complex" evidence=IDA] InterPro:IPR003593 InterPro:IPR004483
SMART:SM00382 SGD:S000001500 GO:GO:0005524 GO:GO:0005737
GO:GO:0003677 EMBL:BK006944 eggNOG:COG1112 InterPro:IPR014001
SMART:SM00487 EMBL:X74152 GO:GO:0006273 GO:GO:0043141
HOGENOM:HOG000185831 OrthoDB:EOG444PTN GO:GO:0033203 EMBL:Z28017
PIR:S34700 RefSeq:NP_012908.1 ProteinModelPortal:P34243 SMR:P34243
DIP:DIP-1383N IntAct:P34243 MINT:MINT-399891 STRING:P34243
PaxDb:P34243 EnsemblFungi:YKL017C GeneID:853852 KEGG:sce:YKL017C
CYGD:YKL017c GeneTree:ENSGT00700000104572 OMA:QGGDFPE
SABIO-RK:P34243 NextBio:975085 Genevestigator:P34243
GermOnline:YKL017C TIGRFAMs:TIGR00376 Uniprot:P34243
Length = 683
Score = 241 (89.9 bits), Expect = 3.5e-16, P = 3.5e-16
Identities = 88/298 (29%), Positives = 142/298 (47%)
Query: 7 VVIDEAAQLKESESAIPLQLPCIQ-HA-ILVGDEVQLPAMVESSVSGEAYFG--RSLFER 62
++IDE +Q E + IPL Q H +L GD QLP +++ +LF+R
Sbjct: 392 LIIDEVSQAMEPQCWIPLIAHQNQFHKLVLAGDNKQLPPTIKTEDDKNVIHNLETTLFDR 451
Query: 63 LSYLGHPKH----LLSMQYRMHPSISFFPNSYFYENKIR-----------DAPTVRKRSY 107
+ + PK L++QYRM+ I FP+ Y K+ D PTV
Sbjct: 452 IIKI-FPKRDMVKFLNVQYRMNQKIMEFPSHSMYNGKLLADATVANRLLIDLPTVDATPS 510
Query: 108 EK---RFLPGPMYGPYSFINVFGGREEFIEHSCRNMVEVSVVMKILRNLYKAWVESKEKL 164
E +P Y E I S N E+++V + + NL V
Sbjct: 511 EDDDDTKIPLIWYDTQGDEFQETADEATILGSKYNEGEIAIVKEHIENLRSFNVPEN--- 567
Query: 165 SIGIVSPYSAQVIAIQEKLGSKYEKIAGFAVKVKSIDGFQGGEEDIIIISTVRSNNTGSI 224
SIG++SPY+AQV +++ + ++++ +++ ++DGFQG E+D+II+S VRSN +
Sbjct: 568 SIGVISPYNAQVSHLKKLI---HDELKLTDIEISTVDGFQGREKDVIILSLVRSNEKFEV 624
Query: 225 GFASTPQRINVALTRARHCLWILGS----ERTLNHSESVWESLLDDAKARQCFFNIDE 278
GF +R+NVA+TR R L ++G+ +R N W ++ A + NID+
Sbjct: 625 GFLKEERRLNVAMTRPRRQLVVVGNIEVLQRCGNKYLKSWSEWCEE-NADVRYPNIDD 681
>ZFIN|ZDB-GENE-070912-617 [details] [associations]
symbol:si:dkey-97a13.6 "si:dkey-97a13.6"
species:7955 "Danio rerio" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004540 "ribonuclease activity" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001900 InterPro:IPR003593 InterPro:IPR026855
Pfam:PF00773 SMART:SM00382 SMART:SM00955 ZFIN:ZDB-GENE-070912-617
GO:GO:0005524 GO:GO:0003723 GO:GO:0004386 GO:GO:0004540
PANTHER:PTHR10887:SF16 GeneTree:ENSGT00550000074391 EMBL:BX663525
IPI:IPI00499390 RefSeq:XP_699251.2 UniGene:Dr.89869
Ensembl:ENSDART00000017829 GeneID:570654 KEGG:dre:570654
NextBio:20890238 Uniprot:E7F3B1
Length = 2781
Score = 247 (92.0 bits), Expect = 5.6e-16, P = 5.6e-16
Identities = 94/294 (31%), Positives = 137/294 (46%)
Query: 7 VVIDEAAQLKESESAIPLQLPCIQHAILVGDEVQLPAMVESSVSGEAYFGRSLFERLSYL 66
++IDE A E ++ +PL + +L+GD QL +V+++ RSLFER Y+
Sbjct: 2493 ILIDECAMATEPQTLVPLVSFKPEKVVLLGDHKQLRPIVKNNHVRRLGMTRSLFER--YM 2550
Query: 67 GHPKHLLSMQYRMHPSISFFPNSYFYENK----IRDAPTVRK-----RSYEKRFLPGPMY 117
+L QYRMH I FP+ +Y + +R+ +V R KR L G +
Sbjct: 2551 DRAI-MLDTQYRMHEEICKFPSEAYYNDMLKTVVRERTSVLNAETEGRRQSKRILFGDIR 2609
Query: 118 GPYSFINVFGGREEFIEHSCRNMVEVSVVMKILRNLYKAWVESKEKLSIGIVSPYSAQVI 177
G + V R E+S N EV ++I L E I I+SPY+AQV
Sbjct: 2610 GEEIGLVVSTARGN--ENSKANFDEVKKAVEICIQLVTVGRVRPE--DIAILSPYNAQVA 2665
Query: 178 AIQEKLGSKYEKIAGFAVKVKSIDGFQGGEEDIIIISTVRSNNTGSI------------- 224
I+E+L S +E + GF V +I QG E +I+S VRS + I
Sbjct: 2666 QIRERL-SDFE-LKGFTVT--TITKSQGSEWQYVILSIVRSCPSDEIEPMPSREWLSKHI 2721
Query: 225 GFASTPQRINVALTRARHCLWILGSERTLNHSESVWESLLDDAKARQCFFNIDE 278
GF +INV +TRA+ L ILG++ LN S + W+ LL C D+
Sbjct: 2722 GFVGDENQINVGITRAQVGLCILGNQAVLNCSPA-WQKLLKHYSGHGCVVTADQ 2774
>MGI|MGI:2138982 [details] [associations]
symbol:Znfx1 "zinc finger, NFX1-type containing 1"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] [GO:0046872 "metal
ion binding" evidence=IEA] MGI:MGI:2138982 GO:GO:0046872
EMBL:CH466551 eggNOG:COG1112 GeneTree:ENSGT00700000104467
EMBL:AL591711 CTD:57169 HOVERGEN:HBG052201 OMA:CVRLCSE
EMBL:AK149249 EMBL:AK150223 EMBL:AK157301 EMBL:BC025488
IPI:IPI00660406 RefSeq:NP_001028368.2 UniGene:Mm.297074
ProteinModelPortal:Q8R151 STRING:Q8R151 PhosphoSite:Q8R151
PaxDb:Q8R151 PRIDE:Q8R151 Ensembl:ENSMUST00000048988 GeneID:98999
KEGG:mmu:98999 HOGENOM:HOG000231023 InParanoid:A2A5R3
NextBio:353739 Bgee:Q8R151 CleanEx:MM_ZNFX1 Genevestigator:Q8R151
GermOnline:ENSMUSG00000039501 Uniprot:Q8R151
Length = 1909
Score = 256 (95.2 bits), Expect = 7.7e-16, Sum P(2) = 7.7e-16
Identities = 79/262 (30%), Positives = 139/262 (53%)
Query: 5 KFVVIDEAAQLKESESAIPLQLPCIQHAILVGDEVQL-PAMVESSVSGEAYFGRSLFERL 63
+ V+++EAA++ E+ + L C QH IL+GD QL P+ ++ SLFERL
Sbjct: 994 RIVIVEEAAEVLEAHTIATLSKAC-QHLILIGDHQQLRPSANVYDLAKNFNLEVSLFERL 1052
Query: 64 SYLGHPKHLLSMQYRMHPSISFFPNSYFYENKIRDAPTVRKRSYEKRFLPGPMYGPYSFI 123
+ P L+ Q+RM P I+ + Y++ + + P+V K YE+ + G +
Sbjct: 1053 VKVNIPFVRLNYQHRMRPEIARLLTPHIYQD-LENHPSVLK--YEQ--IKGVSSNLFFVE 1107
Query: 124 NVFGGREEFIEHSCRNMVEVSVVMKILRNLY-KAWVESKEKLSIGIVSPYSAQVIAIQEK 182
+ F +E S +N E V+++ + L + ++ S+ I I++ Y+ Q+ +++
Sbjct: 1108 HNFPEQEIQEGKSHQNQHEAHFVVELCQYLLCQEYLPSQ----ITILTTYTGQLFCLRKL 1163
Query: 183 LGSKYEKIAGFAVKVKSIDGFQGGEEDIIIISTVRSNNTGSIGFASTPQRINVALTRARH 242
+ K AG +KV +D +QG E DII++S VRSN G +GF P RI VAL+RA+
Sbjct: 1164 MPVK--TFAG--IKVHVVDKYQGEENDIILLSLVRSNQEGKVGFLQIPNRICVALSRAKK 1219
Query: 243 CLWILGSERTLNHSESVWESLL 264
++ +G+ + L +W ++
Sbjct: 1220 GMYCIGNMQMLA-KVPLWSRII 1240
Score = 47 (21.6 bits), Expect = 7.7e-16, Sum P(2) = 7.7e-16
Identities = 15/41 (36%), Positives = 22/41 (53%)
Query: 421 DEFINLCKEKCFEGNLEVPKTWAVTSNIVRFKNLADNESGS 461
+EF+ L +EK + NL V K + N +RF + N GS
Sbjct: 1672 EEFLIL-QEKLAQKNLSV-KDLGLVENSIRFYDHLANLEGS 1710
Score = 39 (18.8 bits), Expect = 5.2e-15, Sum P(2) = 5.2e-15
Identities = 10/29 (34%), Positives = 18/29 (62%)
Query: 1042 SMDLMRNFLKSKSCF-----DELLVLEEE 1065
S + ++ LKSK+ F +E L+L+E+
Sbjct: 1652 SQEQLKALLKSKTLFHQLRPEEFLILQEK 1680
>UNIPROTKB|E1C0Z0 [details] [associations]
symbol:HELZ2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0004540 "ribonuclease
activity" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0030374
"ligand-dependent nuclear receptor transcription coactivator
activity" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
InterPro:IPR001900 InterPro:IPR007087 InterPro:IPR015880
InterPro:IPR026855 Pfam:PF00773 PROSITE:PS00028 SMART:SM00355
SMART:SM00955 GO:GO:0008270 GO:GO:0003723 GO:GO:0005622
GO:GO:0004386 GO:GO:0004540 OMA:FRAAHIM PANTHER:PTHR10887:SF16
GeneTree:ENSGT00550000074391 EMBL:AADN02019144 IPI:IPI00594758
Ensembl:ENSGALT00000009906 Uniprot:E1C0Z0
Length = 2565
Score = 244 (91.0 bits), Expect = 1.1e-15, P = 1.1e-15
Identities = 96/292 (32%), Positives = 139/292 (47%)
Query: 4 LKFVVIDEAAQLKESESAIPL-QLPCIQHAILVGDEVQLPAMVESSVSGEAYFGRSLFER 62
+K ++IDE A E E+ IPL + +L+GD QL +V + SLFER
Sbjct: 2270 VKQILIDECAMSTEPETLIPLVSHKHAEKVVLLGDHKQLKPVVNNDFCKSLGMETSLFER 2329
Query: 63 LSYLGHPKHLLSMQYRMHPSISFFPNSYFYENKIRDAPTV-RKRS--YEK--RFLP---G 114
+L QYRMH +I FP+ FYE++++ P + R S Y K R P G
Sbjct: 2330 YQ---KQAWMLDTQYRMHKNICEFPSQEFYEHRLKTCPQLLRIPSVLYHKNNRCCPIIFG 2386
Query: 115 PMYGPYSFINVFGGREEFIEHSCRNMVEVSVVMKILRNLYKAWVESKEKLSIGIVSPYSA 174
+ G + + EE E+S N EV ++ + L + SI I+SPY+A
Sbjct: 2387 HVEGKEQSLVI--STEEGNENSKANPEEVEQAVRTAKQLTLDGTIRPQ--SIAILSPYNA 2442
Query: 175 QVIAIQEKLGSKYEKIAGFAVKVKSIDGFQGGEEDIIIISTVRSNN--------TGS--- 223
QV I ++L E I G V V +I QG E +I+STVRS + T S
Sbjct: 2443 QVSEINKRLLK--EGIRG--VTVCTIMKSQGSEWRYVILSTVRSCSRHEIDKKPTKSWQK 2498
Query: 224 --IGFASTPQRINVALTRARHCLWILGSERTLNHSESVWESLLDDAKARQCF 273
+GF + P ++NVA+TRA+ L I+G+ R L +W LL C+
Sbjct: 2499 KHLGFVTDPNQVNVAITRAQEGLCIIGN-RYLLECNPLWRRLLQHYIDHNCY 2549
Score = 167 (63.8 bits), Expect = 0.00013, Sum P(3) = 0.00013
Identities = 71/283 (25%), Positives = 130/283 (45%)
Query: 7 VVIDEAAQLKESESAIPLQLPCIQ-HAILVGDEVQLPAMVESSVSGEAYFGRSLFERL-S 64
++IDEAAQ+ E E+ IPL + +L GD +Q+ + G++ + +L RL
Sbjct: 661 IMIDEAAQMLECEALIPLSYATFETRIVLAGDHMQITPKLFCVADGQSAY-HTLLNRLFQ 719
Query: 65 YLGHPKHLLSMQ--------YRMHPSISFFPNSYFYENKIRDAPTVRKRSYEKRFLPGPM 116
+ KH ++M+ YR I F + +FY K + P P
Sbjct: 720 FYQKEKHEVAMKSRIIFNENYRSTAGIIEFVSKHFYIGK---GNAIHASG---NIPPHPE 773
Query: 117 YGPYSFINVFGGREEFIEH-SCRNMVEVSVVMKILRNLYKAWVE---SKEKLSIGIVSPY 172
P F +V G E + S N E++ V++ + +Y+ W ++++ I +VS +
Sbjct: 774 IYPLMFCHVPGVAERDMSMISWHNASEITQVVEKVEEIYQRWPHEWGAQDQKRICVVS-H 832
Query: 173 SAQVIAIQEKLGSKYEKIAGFAVKVKSIDGFQGGEEDIIIISTVRSNNTGSIG------F 226
QV AI+++L K V V++ + G E +IIISTV ++ + + F
Sbjct: 833 GVQVSAIRQELRKKQLP----EVVVENYENLPGREFRVIIISTVHTSESLRVSASHNHEF 888
Query: 227 ASTPQRINVALTRARHCLWILGSERTL-NHSE--SVWESLLDD 266
+ + +N +TRA+ + ++G L +H + VW+ + +
Sbjct: 889 FNEARVLNTIMTRAQSQVIVVGDAVALCSHGQCSKVWKRFIQE 931
Score = 44 (20.5 bits), Expect = 0.00013, Sum P(3) = 0.00013
Identities = 16/71 (22%), Positives = 32/71 (45%)
Query: 1126 EKKELFEKAKSLAKSNSNQFYEFVCTEASILSNDESDLFIMNQQLNASKRHQSICGETLS 1185
EK L K L +N F + + E S+ + ++++ Q + H++IC
Sbjct: 2297 EKVVLLGDHKQLKPVVNNDFCKSLGMETSLFERYQKQAWMLDTQY---RMHKNIC--EFP 2351
Query: 1186 ARKILDCHLKT 1196
+++ + LKT
Sbjct: 2352 SQEFYEHRLKT 2362
Score = 42 (19.8 bits), Expect = 0.00031, Sum P(3) = 0.00031
Identities = 8/18 (44%), Positives = 11/18 (61%)
Query: 608 ERQEKGQLSDIFNLSQNF 625
+R KGQL F L ++F
Sbjct: 1895 QRTSKGQLQGTFRLKKSF 1912
Score = 40 (19.1 bits), Expect = 0.00013, Sum P(3) = 0.00013
Identities = 16/58 (27%), Positives = 26/58 (44%)
Query: 956 YKHAAEVYARGNFFSECLAVCSRGELFDIGLQYINYWKQHVDTDVGLVRRSKEINKVE 1013
+ H+ +Y + +A+ R E FDI + K+ VG VR+S + VE
Sbjct: 1736 HDHSVTLYQSKTWQDVLMAI--RQEKFDIVPSLLQKSKELYRRRVGWVRKSDCSHYVE 1791
Score = 38 (18.4 bits), Expect = 0.00031, Sum P(3) = 0.00031
Identities = 12/41 (29%), Positives = 19/41 (46%)
Query: 1134 AKSLAKSNSNQFYEFVCTEASILSNDESDLFIMNQQLNASK 1174
AKS+A + T++ IL DL ++LN S+
Sbjct: 2032 AKSIALGHEPPSKALTVTKSKILQQKSFDLPGSQRKLNPSQ 2072
>RGD|1306791 [details] [associations]
symbol:Dna2 "DNA replication helicase 2 homolog (yeast)"
species:10116 "Rattus norvegicus" [GO:0000076 "DNA replication
checkpoint" evidence=ISO;ISS] [GO:0000729 "DNA double-strand break
processing" evidence=ISO;ISS] [GO:0003677 "DNA binding"
evidence=ISO;ISS] [GO:0003678 "DNA helicase activity"
evidence=ISO;ISS] [GO:0004518 "nuclease activity" evidence=ISO;ISS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA;ISO] [GO:0005760 "gamma DNA polymerase complex"
evidence=IEA;ISO] [GO:0006260 "DNA replication" evidence=ISO;ISS]
[GO:0006264 "mitochondrial DNA replication" evidence=IEA;ISO]
[GO:0006284 "base-excision repair" evidence=IEA;ISO] [GO:0016890
"site-specific endodeoxyribonuclease activity, specific for altered
base" evidence=IEA;ISO] [GO:0017108 "5'-flap endonuclease activity"
evidence=ISO;ISS] [GO:0032508 "DNA duplex unwinding" evidence=ISO]
[GO:0033567 "DNA replication, Okazaki fragment processing"
evidence=ISO;ISS] [GO:0042645 "mitochondrial nucleoid"
evidence=IEA;ISO] [GO:0043137 "DNA replication, removal of RNA
primer" evidence=IEA;ISO] [GO:0043139 "5'-3' DNA helicase activity"
evidence=ISO;ISS] [GO:0043142 "single-stranded DNA-dependent ATPase
activity" evidence=ISO;ISS] [GO:0043504 "mitochondrial DNA repair"
evidence=IEA;ISO] [GO:0045740 "positive regulation of DNA
replication" evidence=IEA;ISO] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0051539 "4 iron, 4 sulfur cluster binding"
evidence=IEA] InterPro:IPR026851 InterPro:IPR014808 Pfam:PF08696
RGD:1306791 GO:GO:0005524 GO:GO:0005634 GO:GO:0046872 GO:GO:0006284
GO:GO:0003677 GO:GO:0051539 GO:GO:0042645 GO:GO:0016890
GO:GO:0045740 GO:GO:0000729 GO:GO:0017108 GO:GO:0000076
GO:GO:0043137 GO:GO:0005760 GO:GO:0043139 GO:GO:0043142
GO:GO:0033567 GO:GO:0043504 GO:GO:0006264 PANTHER:PTHR10887:SF14
GeneTree:ENSGT00550000074852 IPI:IPI00368049
ProteinModelPortal:D3ZG52 Ensembl:ENSRNOT00000000438
UCSC:RGD:1306791 OrthoDB:EOG4CZBF7 Uniprot:D3ZG52
Length = 1059
Score = 238 (88.8 bits), Expect = 1.5e-15, P = 1.5e-15
Identities = 87/294 (29%), Positives = 135/294 (45%)
Query: 6 FVVIDEAAQLKESESAIPLQLPCIQHAILVGDEVQLPAMVESSVSGEAYFGRSLFERLSY 65
F ++DEA+Q+ + PL + +LVGD QLP +V + + SLF+RL
Sbjct: 758 FCIVDEASQISQPICLGPLFFS--RRFVLVGDHKQLPPLVLNREARALGMSESLFKRLER 815
Query: 66 LGHPKHLLSMQYRMHPSISFFPNSYFYENKI-----RDA------PT---VRKRSY---- 107
L++QYRM+ I N YE K+ R A P VR Y
Sbjct: 816 NESAVVQLTIQYRMNRKIMSLSNKLTYEGKLECGSDRVANAVITLPNLKDVRLEFYADYS 875
Query: 108 EKRFLPGPMY--GPYSFINV--FGGREEFIEHSCRNMVEVSVVMKILRNLYKAWVESKEK 163
+ +L G P F+N E+ N+ E +++ + KA +
Sbjct: 876 DNPWLAGVFEPDNPVCFLNTDKVPAPEQIENGGVSNVTEARLIVFLTSTFIKAGCSPSD- 934
Query: 164 LSIGIVSPYSAQVIAIQEKLGSKYEKIAGFAVKVKSIDGFQGGEEDIIIISTVRSNNTGS 223
IGI++PY Q+ I + L G V+V ++D +QG ++ +I++S VRSN G+
Sbjct: 935 --IGIIAPYRQQLRTITDLLA---RSSVGM-VEVNTVDKYQGRDKSLILVSFVRSNEDGT 988
Query: 224 IG-FASTPQRINVALTRARHCLWILGSERTLNHSESVWESLLDDAKARQCFFNI 276
+G +R+NVA+TRA+H L +LGS +L + E L D A Q N+
Sbjct: 989 LGELLKDWRRLNVAITRAKHKLILLGSVSSLKRFPPL-EKLFDHLNAEQLISNL 1041
>ZFIN|ZDB-GENE-091230-8 [details] [associations]
symbol:mov10a "Moloney leukemia virus 10, homolog, a"
species:7955 "Danio rerio" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 SMART:SM00382 ZFIN:ZDB-GENE-091230-8
GO:GO:0005524 GO:GO:0017111 InterPro:IPR026122
PANTHER:PTHR10887:SF17 GeneTree:ENSGT00550000074391 EMBL:CU469362
IPI:IPI00481619 RefSeq:XP_002662576.2 UniGene:Dr.155704
Ensembl:ENSDART00000064826 GeneID:566858 KEGG:dre:566858 CTD:566858
NextBio:20888414 Bgee:E7FAV9 Uniprot:E7FAV9
Length = 1001
Score = 236 (88.1 bits), Expect = 2.3e-15, P = 2.3e-15
Identities = 75/249 (30%), Positives = 122/249 (48%)
Query: 43 AMVESSVSGEAYFGRSLFERLSYLGHPKHLLSMQYRMHPSISFFPNSYFYENKIRD-APT 101
+++E + A + +S + Y L YR HP+I PN FYEN+++ A
Sbjct: 714 SLLERLMKRNALYQKSQDDNSKYDSRFVTKLLRNYRSHPAILKIPNELFYENELQVFANQ 773
Query: 102 VRKRSY-EKRFLPGPMYGPYSFINVFGGRE-EFIEHSCRNMVEVSVVMKILRNLYKAW-V 158
+ + ++ + LP + P F V G E E S N+ E+ V++ L NL +
Sbjct: 774 MEREAFCQWEHLPRKGF-PVVFHGVMGKDEREANSPSFFNVTEIEVIVNYLNNLMQTQGK 832
Query: 159 ESKEKLS---IGIVSPYSAQVIAIQEKLGSKYEKIAGFAVKVKSIDGFQGGEEDIIIIST 215
+ KL IGI++PY QV I++ L + E +KV S++ FQG E +II+ST
Sbjct: 833 KGLPKLGPNDIGIIAPYRKQVEKIRKALNTVGELKKWKDIKVGSVEEFQGQERKVIIVST 892
Query: 216 VRSN-------NTGSIGFASTPQRINVALTRARHCLWILGSERTLNHSESVWESLLDDAK 268
VRS+ +IGF S +R NVA+TRA+ L ++G+ L+ + W+ + +
Sbjct: 893 VRSSVNYVKMDQDFNIGFLSNEKRFNVAMTRAKGLLIVVGNPVILS-KDPTWQKFIQYCE 951
Query: 269 ARQCFFNID 277
Q + D
Sbjct: 952 QEQGYTGFD 960
>FB|FBgn0034187 [details] [associations]
symbol:CG6967 species:7227 "Drosophila melanogaster"
[GO:0000184 "nuclear-transcribed mRNA catabolic process,
nonsense-mediated decay" evidence=ISS] UCSC:CG6967-RC
FlyBase:FBgn0034187 NextBio:801049 EMBL:AY119610
ProteinModelPortal:Q8MRI1 PRIDE:Q8MRI1 InParanoid:Q8MRI1
PhylomeDB:Q8MRI1 ArrayExpress:Q8MRI1 Bgee:Q8MRI1 Uniprot:Q8MRI1
Length = 825
Score = 230 (86.0 bits), Expect = 7.6e-15, P = 7.6e-15
Identities = 87/284 (30%), Positives = 138/284 (48%)
Query: 7 VVIDEAAQLKESESAIPLQ-----LPCIQHAILVGDEVQLPAMVESSVSGEAYFGRSLFE 61
+ IDEA E E+ I + C H IL GD QL A+++S+ + RSL E
Sbjct: 474 IFIDEAGASTEPEALIGIMGIKQTADC--HVILSGDHKQLGAVIKSNRAASLGLSRSLME 531
Query: 62 RL------------SYLGHPKHLLSMQYRMHPSISFFPNSYFYENKIR-DAPTVRKR-SY 107
RL +Y + + L YR HP I N +Y +++ AP + +
Sbjct: 532 RLLQSDCYKSDENGNYDRNRQMRLCRNYRSHPQIVRLFNELYYNGELKAQAPAMDVNLAA 591
Query: 108 EKRFLPGPMYGPYSFINVFG--GREEFIEHSCRNMVEVSVVMKILRNLYKAWVESKEKLS 165
L P + P F G RE+ S N+ E V+ ++ L V +E
Sbjct: 592 NWSVLTNPQF-PIIFQATHGVTNREQNSTSSYNNL-EAEVICWYVKRLINDRVVGQE--D 647
Query: 166 IGIVSPYSAQVIAIQEKLGSKYEKIAGFA-VKVKSIDGFQGGEEDIIIISTVRSNNTGSI 224
+GIV+PY+AQ + + L SK G+ V+V S++ +QG E+ III S V+S ++
Sbjct: 648 VGIVAPYTAQGKLVTKLLQSK-----GYPNVEVGSVETYQGREKTIIIASLVKSFT--NM 700
Query: 225 GFASTPQRINVALTRARHCLWILGSERTLNHSESVWESLLDDAK 268
GF P+R+NV L+RA+ L ++G+ TL H S ++ ++++ K
Sbjct: 701 GFMCNPRRVNVLLSRAKALLILVGNPVTLRH-HSDFKFVINECK 743
>POMBASE|SPBC16D10.04c [details] [associations]
symbol:dna2 "DNA replication endonuclease-helicase
Dna2" species:4896 "Schizosaccharomyces pombe" [GO:0000084 "S phase
of mitotic cell cycle" evidence=IC] [GO:0000723 "telomere
maintenance" evidence=IGI] [GO:0000784 "nuclear chromosome,
telomeric region" evidence=ISO] [GO:0004003 "ATP-dependent DNA
helicase activity" evidence=ISO] [GO:0004518 "nuclease activity"
evidence=IMP] [GO:0004527 "exonuclease activity" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005524 "ATP
binding" evidence=ISM] [GO:0005634 "nucleus" evidence=IC;IDA]
[GO:0005657 "replication fork" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006281 "DNA repair" evidence=ISS] [GO:0017108
"5'-flap endonuclease activity" evidence=ISO] [GO:0019901 "protein
kinase binding" evidence=IPI] [GO:0031573 "intra-S DNA damage
checkpoint" evidence=IMP] [GO:0031860 "telomeric 3' overhang
formation" evidence=IMP] [GO:0042162 "telomeric DNA binding"
evidence=IDA] [GO:0043137 "DNA replication, removal of RNA primer"
evidence=IMP] [GO:0043142 "single-stranded DNA-dependent ATPase
activity" evidence=IEA] [GO:0043596 "nuclear replication fork"
evidence=IC] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0051539 "4 iron, 4 sulfur cluster binding" evidence=IEA]
[GO:0071932 "replication fork reversal" evidence=IMP]
InterPro:IPR026851 PomBase:SPBC16D10.04c InterPro:IPR014808
Pfam:PF08696 GO:GO:0005829 GO:GO:0005524 GO:GO:0046872
EMBL:CU329671 GO:GO:0006281 GenomeReviews:CU329671_GR GO:GO:0051539
GO:GO:0043596 GO:GO:0004003 GO:GO:0004527 GO:GO:0000084
eggNOG:COG1112 GO:GO:0000784 GO:GO:0042162 GO:GO:0031573
GO:GO:0017108 GO:GO:0043137 GO:GO:0031860 GO:GO:0043142
PANTHER:PTHR10887:SF14 EMBL:AF144384 EMBL:AB028014 EMBL:AF075169
PIR:T39568 PIR:T47242 PIR:T51292 RefSeq:NP_596499.2 STRING:Q9URU2
GeneID:2540148 OrthoDB:EOG47H8Z4 NextBio:20801284 GO:GO:0071932
InterPro:IPR022765 Pfam:PF01930 Uniprot:Q9URU2
Length = 1397
Score = 233 (87.1 bits), Expect = 7.6e-15, P = 7.6e-15
Identities = 88/300 (29%), Positives = 153/300 (51%)
Query: 6 FVVIDEAAQLKESESAIPLQLPCIQHAILVGDEVQLPAMVESSVSGEAYFGRSLFERLSY 65
+ +IDEA+Q+ PLQL + +LVGD QLP +V++S + + SLF+ LS
Sbjct: 1061 YCIIDEASQIPLPICLGPLQLA--EKFVLVGDHYQLPPLVKNSRTSKDGLSLSLFKLLSE 1118
Query: 66 LGHPKHL--LSMQYRMHPSISFFPNSYFYE-NKIRDAPTVRKR------SYEKRFLP--- 113
HP+ + L +QYRM+ I+ + Y N + + T+ ++ ++ LP
Sbjct: 1119 K-HPEAVTTLRLQYRMNEDINSLSSELIYGGNLVCGSKTISQKKLILPKAHLSDGLPDSS 1177
Query: 114 GPMYGPYSFIN-----VFGGREEF--IEHSCRNMVEVSVVMKILRNLYKAWVESKEKLS- 165
++ IN +F ++ +E N++E ++ +++E K S
Sbjct: 1178 SSLHWVNKLINPSHSVIFFNTDDILGVESKTNNILENHTEAFLIEQAVSSFLERGVKQSS 1237
Query: 166 IGIVSPYSAQVIAIQEKLGSKYEKIAGFAVKVKSIDGFQGGEEDIIIISTVRSNNTGSIG 225
IGI+S Y +QV + + L S E +++ ++D +QG ++DII+IS VRSN+ +G
Sbjct: 1238 IGIISIYKSQVELLSKNLKSFTE------IEINTVDRYQGRDKDIILISFVRSNSKNLVG 1291
Query: 226 -FASTPQRINVALTRAR-HCLWILGSERTLNHSESVWESLLDDAKARQCFFNIDEDKDLA 283
R+NVAL+RA+ C+ + GS TL+ S V LL + + F ++E+ D+A
Sbjct: 1292 ELLRDWHRLNVALSRAKVKCI-MFGSLSTLSSSNIV-SHLLKLLEKNKWIFTLNEN-DIA 1348
>ASPGD|ASPL0000064563 [details] [associations]
symbol:AN7014 species:162425 "Emericella nidulans"
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IEA]
[GO:0005681 "spliceosomal complex" evidence=IEA] [GO:0097157
"pre-mRNA intronic binding" evidence=IEA] InterPro:IPR024860
InterPro:IPR026300 PIRSF:PIRSF038901 GO:GO:0005681 EMBL:BN001304
GO:GO:0004386 GO:GO:0000398 HOGENOM:HOG000170551 GO:GO:0097157
PANTHER:PTHR10887:SF5 ProteinModelPortal:C8VC84
EnsemblFungi:CADANIAT00000462 OMA:TIYENEM Uniprot:C8VC84
Length = 1422
Score = 231 (86.4 bits), Expect = 1.3e-14, P = 1.3e-14
Identities = 87/272 (31%), Positives = 136/272 (50%)
Query: 7 VVIDEAAQLKESESAIPL--------QLPCIQHAILVGDEVQLPAMVESSVSGE-AYFGR 57
+V++EAAQ+ E ES IP QLP ++ +L GD +Q ++++ + A+F +
Sbjct: 1063 IVMEEAAQITEVESFIPTALQNMKEGQLP-LKRIVLCGDHLQNSPIIQNLAFRQYAHFEQ 1121
Query: 58 SLFERLSYLGHPKHLLSMQYRMHPSIS-FFPNSYFYENKIRDAPTVRKRSYEKRFLPGPM 116
SLF RL LG P L Q R PSI+ F + Y+N + + P V + K+ G
Sbjct: 1122 SLFLRLIRLGVPAITLDQQGRARPSIAELF--RWRYQN-LGNLPIVEQAPEFKQANAGFQ 1178
Query: 117 YGPYSFINV---FG-GREEFIEHSCRNMVEVSVVMKILRNL-YKAWVESKEKLSIGIVSP 171
+ Y FINV G G E H +N+ E + I + + + SK I I++
Sbjct: 1179 F-EYQFINVPDYQGTGEREPTPHFVQNLGEAEYAVAIFQYMRLLGYPASK----ISILAT 1233
Query: 172 YSAQVIAIQEKLGSKYEK--IAGFAVKVKSIDGFQGGEEDIIIISTVRSNNTGSIGFAST 229
Y+ Q I++ L + K + G V ++D +QG + D II+S R T ++G+
Sbjct: 1234 YAGQTALIKDVLNHRCSKNTLFGMPKIVTTVDRYQGEQNDYIILSLTR---TRTVGYLRD 1290
Query: 230 PQRINVALTRARHCLWILGSERTLNHSESVWE 261
+R+ VAL+RAR L+ILG ES +E
Sbjct: 1291 VRRLTVALSRARLGLYILGRREVF---ESCYE 1319
>ZFIN|ZDB-GENE-090313-71 [details] [associations]
symbol:dna2 "DNA replication helicase 2 homolog
(yeast)" species:7955 "Danio rerio" [GO:0017108 "5'-flap
endonuclease activity" evidence=IEA;ISS] [GO:0033567 "DNA
replication, Okazaki fragment processing" evidence=IEA] [GO:0043142
"single-stranded DNA-dependent ATPase activity" evidence=IEA]
[GO:0006264 "mitochondrial DNA replication" evidence=ISS]
[GO:0043137 "DNA replication, removal of RNA primer" evidence=ISS]
[GO:0016890 "site-specific endodeoxyribonuclease activity, specific
for altered base" evidence=ISS] [GO:0005760 "gamma DNA polymerase
complex" evidence=ISS] [GO:0006284 "base-excision repair"
evidence=ISS] [GO:0045740 "positive regulation of DNA replication"
evidence=ISS] InterPro:IPR026851 InterPro:IPR014808 Pfam:PF08696
ZFIN:ZDB-GENE-090313-71 GO:GO:0017108 GO:GO:0043142 GO:GO:0033567
PANTHER:PTHR10887:SF14 GeneTree:ENSGT00550000074852 EMBL:BX530068
IPI:IPI00901582 Ensembl:ENSDART00000109798 ArrayExpress:F1Q892
Bgee:F1Q892 Uniprot:F1Q892
Length = 1378
Score = 163 (62.4 bits), Expect = 1.8e-14, Sum P(2) = 1.8e-14
Identities = 48/137 (35%), Positives = 77/137 (56%)
Query: 131 EFIEHS-CRNMVEVSVVMKILRNLYKAWVESKEKLSIGIVSPYSAQVIAIQEKL-GSKYE 188
E +E S N E +V ++ L KA + + IG+++PY Q+ I L G ++
Sbjct: 1222 ETVEKSGISNHTEAVLVQGLVTLLLKAGCRACD---IGVIAPYRQQLKVISSLLQGDAFK 1278
Query: 189 KIAGFAVKVKSIDGFQGGEEDIIIISTVRSNNTGSIG-FASTPQRINVALTRARHCLWIL 247
A++V ++D +QG ++ +II+S VRSN G++G +R+NVA+TRA+H L +L
Sbjct: 1279 -----ALEVNTVDKYQGRDKSVIIVSFVRSNAEGNLGELLQDWRRLNVAITRAKHKLLML 1333
Query: 248 GSERTLNHSESVWESLL 264
GS TL + E LL
Sbjct: 1334 GSAPTLRRYAPL-EKLL 1349
Score = 125 (49.1 bits), Expect = 1.8e-14, Sum P(2) = 1.8e-14
Identities = 30/91 (32%), Positives = 50/91 (54%)
Query: 6 FVVIDEAAQLKESESAIPLQLPCIQHAILVGDEVQLPAMVESSVSGEAYFGRSLFERLSY 65
F ++DEA+Q+ + PL Q +LVGD QLP +V+++ + SLF+RL +
Sbjct: 1075 FCIVDEASQISQPVCIGPLFYA--QRFVLVGDHQQLPPIVQNAEARSLGMDESLFKRLEH 1132
Query: 66 LGHPKHLLSMQYRMHPSISFFPNSYFYENKI 96
L++QYRM+ +I N+ YE ++
Sbjct: 1133 HRDAVVQLNVQYRMNSAIMSLSNALMYEGRL 1163
>RGD|1306056 [details] [associations]
symbol:Pric285 "peroxisomal proliferator-activated receptor A
interacting complex 285" species:10116 "Rattus norvegicus"
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0004540 "ribonuclease activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0030374
"ligand-dependent nuclear receptor transcription coactivator
activity" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
InterPro:IPR001900 InterPro:IPR003593 InterPro:IPR026855
Pfam:PF00773 SMART:SM00382 SMART:SM00955 RGD:1306056 GO:GO:0005524
GO:GO:0003723 GO:GO:0004386 GO:GO:0004540 PANTHER:PTHR10887:SF16
GeneTree:ENSGT00550000074391 IPI:IPI00567928 RefSeq:XP_001057758.2
RefSeq:XP_230961.5 UniGene:Rn.47450 ProteinModelPortal:D4ADC2
Ensembl:ENSRNOT00000017787 GeneID:296474 KEGG:rno:296474
UCSC:RGD:1306056 CTD:296474 OrthoDB:EOG4Q84WM NextBio:641262
ArrayExpress:D4ADC2 Uniprot:D4ADC2
Length = 2944
Score = 232 (86.7 bits), Expect = 2.4e-14, P = 2.4e-14
Identities = 91/286 (31%), Positives = 132/286 (46%)
Query: 7 VVIDEAAQLKESESAIPLQ-LPCIQHAILVGDEVQLPAMVESSVSGEAYFGRSLFERLSY 65
++IDEA E E+ IPL + +L+GD QL +V++ RSLFER
Sbjct: 2652 ILIDEAGMATEPETLIPLVCFSKTEKVVLLGDHKQLRPVVKNEQLRNLGMDRSLFERYH- 2710
Query: 66 LGHPKHLLSMQYRMHPSISFFPNSYFYENKIRDAPTVRKRSYEKRFLPGPMYGPYSFINV 125
+L QYRMH I FP+ FY K++ + KR G P F +V
Sbjct: 2711 --RDAIMLDTQYRMHKDICSFPSMEFYGGKLKTWSDL-KRPPSLLGHVGKQSCPVIFGSV 2767
Query: 126 FG-------GREEFIEHSCRNMVEVSVVMKILRNL-YKAWVESKEKLSIGIVSPYSAQVI 177
G EE E+S N EV+ V++I++ L V+ K+ + +++PY+AQ
Sbjct: 2768 QGYEQKLLVSTEEGNENSRANPEEVTEVVRIIKQLTLDRTVDPKD---VAVLTPYNAQAA 2824
Query: 178 AIQEKLGSKYEKIAGFAVKVKSIDGFQGGEEDIIIISTVRS--------NNTGS-----I 224
AI G + G V V SI QG E +I+STVR+ T S +
Sbjct: 2825 AISR--GLMQRGVTG--VTVTSITKSQGSEWRYVIVSTVRTCPRSDMDQRPTKSWLKKFL 2880
Query: 225 GFASTPQRINVALTRARHCLWILGSERTLNHSESVWESLLDDAKAR 270
GF P ++NVA+TRA+ L I+G L +W LL +A+
Sbjct: 2881 GFVVDPHQVNVAITRAQEGLCIIGDHLLLRCCP-LWHRLLGFCEAQ 2925
>WB|WBGene00014208 [details] [associations]
symbol:ZK1067.2 species:6239 "Caenorhabditis elegans"
[GO:0008168 "methyltransferase activity" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] GeneTree:ENSGT00700000104467
EMBL:Z70038 RefSeq:NP_001254204.1 EnsemblMetazoa:ZK1067.2b
GeneID:174463 KEGG:cel:CELE_ZK1067.2 CTD:174463 WormBase:ZK1067.2b
OMA:THIGVQI Uniprot:E9P860
Length = 2443
Score = 241 (89.9 bits), Expect = 4.1e-14, Sum P(2) = 4.1e-14
Identities = 83/275 (30%), Positives = 144/275 (52%)
Query: 5 KFVVIDEAAQLKESESAIPLQLPCIQHAILVGDEVQL---PAMVESSVSGEAYFGR-SLF 60
+ ++++EAA++ E+ I + ++H +++GD QL PA+ E V AY R S+F
Sbjct: 1462 RILIVEEAAEVLEAH-IISAMISTVEHVVMIGDHKQLRPNPAVHELGV---AYGLRISMF 1517
Query: 61 ERLSYLGHPKHLLSMQYRMHPSISF-FPNSYFYENKIRDAPTVRKRSYEKRFLPGPMYGP 119
ERL G P L Q+RM+ +IS FY+N + DA V Y + G M
Sbjct: 1518 ERLVERGLPFSQLRQQHRMNLTISDKIVKLSFYDN-VTDAENVGL--YPD--VQG-MATN 1571
Query: 120 YSFINVFGGREEFIEHSCRNMVEVSVVMKILRNLYKAWVESKEKLSIGIVSPYSAQVIAI 179
F + E E S N E+S+ + ++++L K + + I +++ YSAQ +
Sbjct: 1572 LFFWSHTSMEESPDEVSWLNKHEISMTVALVKHLLKQNYTTND---IVVLATYSAQKNLM 1628
Query: 180 QEKLGSKYEKIAGF-AVKVKSIDGFQGGEEDIIIISTVRSN-----NTGSIGFASTPQRI 233
+ + + + V+++D FQG E I+I+S VRS+ NTG IGF + RI
Sbjct: 1629 YREYANVFGSTPDSNVIPVETVDSFQGKERKIVIVSLVRSHRGGRENTG-IGFLAVANRI 1687
Query: 234 NVALTRARHCLWILGSERTLNHSESVWESLLDDAK 268
VALTRA+H ++I+G+ + ++ +W ++++ +
Sbjct: 1688 CVALTRAQHGMYIIGNGAYIMNNSELWNKIVNNLR 1722
Score = 48 (22.0 bits), Expect = 4.1e-14, Sum P(2) = 4.1e-14
Identities = 9/34 (26%), Positives = 18/34 (52%)
Query: 919 KCFYDLGEYERAGKIYEERCGKPELEKAGECFFL 952
+C Y+ + + + ++ RC K E+ G C +L
Sbjct: 1788 RCLYNCDK-KCSNPQFQHRCKKACYEECGSCLYL 1820
>RGD|1589127 [details] [associations]
symbol:LOC684558 "similar to regulator of nonsense transcripts
1" species:10116 "Rattus norvegicus" [GO:0000785 "chromatin"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=IEA]
[GO:0006260 "DNA replication" evidence=IEA] [GO:0006281 "DNA
repair" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0009048 "dosage compensation by inactivation of X chromosome"
evidence=IEA] [GO:0035145 "exon-exon junction complex"
evidence=IEA] [GO:0044530 "supraspliceosomal complex" evidence=IEA]
[GO:0071044 "histone mRNA catabolic process" evidence=IEA]
GO:GO:0006260 GO:GO:0006281 GO:GO:0000785 GO:GO:0003682
GO:GO:0007049 GO:GO:0071044 GO:GO:0009048 GO:GO:0004004
GO:GO:0035145 GeneTree:ENSGT00550000074391 IPI:IPI00767398
PRIDE:F1LY19 Ensembl:ENSRNOT00000027268 Uniprot:F1LY19
Length = 391
Score = 214 (80.4 bits), Expect = 7.4e-14, P = 7.4e-14
Identities = 57/155 (36%), Positives = 87/155 (56%)
Query: 122 FINVFGGREEFIEH--SCRNMVEVSVVMKILRNLYKAWVESKEKLSIGIVSPYSAQ---V 176
F V G+EE S N E + V KI L KA + + IGI++PY Q +
Sbjct: 20 FFYVTQGQEEIASSGTSYLNRTEAANVEKITTKLLKAGAKPDQ---IGIITPYEGQRSYL 76
Query: 177 IAIQEKLGSKYEKIAGFAVKVKSIDGFQGGEEDIIIISTVRSNNTGSIGFASTPQRINVA 236
+ + GS + K+ V++ S+D FQG E+D II+S VR+N IGF + P+R+NVA
Sbjct: 77 VQYMQFSGSLHTKLYQ-EVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVA 135
Query: 237 LTRARHCLWILGSERTLNHSESVWESLLDDAKARQ 271
LTRAR+ + I+G+ + L+ + +W LL K ++
Sbjct: 136 LTRARYGVIIVGNPKALS-KQPLWNHLLSYYKEQK 169
>ASPGD|ASPL0000069352 [details] [associations]
symbol:AN7246 species:162425 "Emericella nidulans"
[GO:0005575 "cellular_component" evidence=ND] [GO:0005525 "GTP
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0006614 "SRP-dependent cotranslational protein targeting to
membrane" evidence=IEA] InterPro:IPR000641 InterPro:IPR003593
InterPro:IPR003959 Pfam:PF00004 PRINTS:PR00819 SMART:SM00382
GO:GO:0005524 EMBL:BN001304 eggNOG:COG0464 GO:GO:0017111
EMBL:AACD01000123 RefSeq:XP_680515.1 ProteinModelPortal:Q5AWT4
EnsemblFungi:CADANIAT00000198 GeneID:2870136 KEGG:ani:AN7246.2
HOGENOM:HOG000168598 OMA:LDNQFRL OrthoDB:EOG4CJZR5 Uniprot:Q5AWT4
Length = 2310
Score = 167 (63.8 bits), Expect = 8.4e-14, Sum P(3) = 8.4e-14
Identities = 33/74 (44%), Positives = 47/74 (63%)
Query: 195 VKVKSIDGFQGGEEDIIIISTVRSNNTGSIGFASTPQRINVALTRARHCLWILGSERTLN 254
+K+ +ID +QG E DI+I + RSN G IGF S PQR+NV L+RAR L ++G+ T
Sbjct: 960 IKLSTIDNYQGEESDIVIATLTRSNKDGDIGFMSAPQRLNVLLSRARDVLIMIGNSNTFT 1019
Query: 255 HS---ESVWESLLD 265
+S + VW+ D
Sbjct: 1020 NSRKGKEVWKPFFD 1033
Score = 136 (52.9 bits), Expect = 8.4e-14, Sum P(3) = 8.4e-14
Identities = 55/186 (29%), Positives = 91/186 (48%)
Query: 7 VVIDEAAQLKESESAIPLQLPCIQHAILVGDEVQLPAMVES---SVS-GEAY-FGRSLFE 61
V+++EA ++ ES L Q I++GD QL + + SV G Y RSLFE
Sbjct: 745 VLLEEAGEILESHVLTALGSHTKQ-LIMIGDHQQLRPKINNYALSVEKGSGYDLNRSLFE 803
Query: 62 RLSYLGHPKHLLSMQYRMHPSISFFPNSYFYENKIRDAPTVRK---RSYEKRFLPGPMYG 118
RL G+P L+ Q+RM P IS Y + + T + R + R +
Sbjct: 804 RLVESGYPHSTLAKQHRMAPEISALVRRLTYPDLLDGDKTKTRLAPRGLQNRVVFIDHSQ 863
Query: 119 PYSFINVFGGRE-EFIEHSCRNMVEVSVVMKILRNLYKAWVESKEKLSIGIVSPYSAQVI 177
P F++ R+ + + S +N EV +V+KI++ L + + +KL I ++PY Q+
Sbjct: 864 PEGFLHGVSDRDGDGGKGSKQNTFEVKLVLKIVKYLGQQGYGT-DKLVI--LTPYLGQLH 920
Query: 178 AIQEKL 183
++E+L
Sbjct: 921 LLREEL 926
Score = 47 (21.6 bits), Expect = 2.6e-13, Sum P(4) = 2.6e-13
Identities = 9/21 (42%), Positives = 13/21 (61%)
Query: 521 MILFPRSTFILGRSGTGKTTI 541
++ F + LG GTGKTT+
Sbjct: 1593 LVEFTLNRVFLGSPGTGKTTV 1613
Score = 46 (21.3 bits), Expect = 2.6e-13, Sum P(4) = 2.6e-13
Identities = 8/12 (66%), Positives = 10/12 (83%)
Query: 530 ILGRSGTGKTTI 541
+LG GTGKTT+
Sbjct: 1325 LLGNPGTGKTTV 1336
Score = 38 (18.4 bits), Expect = 8.4e-14, Sum P(3) = 8.4e-14
Identities = 11/33 (33%), Positives = 18/33 (54%)
Query: 475 ENSNVTDSLLLMKFYPLSSGIVSHLLSDRDGRE 507
+N +VT+ L+L V H++S+R RE
Sbjct: 2092 KNVSVTEELILRH--------VDHMISERTNRE 2116
Score = 38 (18.4 bits), Expect = 2.6e-13, Sum P(4) = 2.6e-13
Identities = 9/26 (34%), Positives = 15/26 (57%)
Query: 1880 LSTLVEIYERLQSSRPKLEPLLNLLF 1905
L ++ YER + +P +E LN +F
Sbjct: 1577 LDSMQSNYERELNEKPLVEFTLNRVF 1602
Score = 37 (18.1 bits), Expect = 2.6e-13, Sum P(4) = 2.6e-13
Identities = 7/16 (43%), Positives = 12/16 (75%)
Query: 575 VEAE-EGLGGSERCIL 589
+ AE +G+ G +RC+L
Sbjct: 1696 IVAEVQGVPGDDRCVL 1711
Score = 37 (18.1 bits), Expect = 2.0e-12, Sum P(4) = 2.0e-12
Identities = 6/11 (54%), Positives = 7/11 (63%)
Query: 1475 WKEFFESLSWN 1485
WK FF+ L N
Sbjct: 1028 WKPFFDQLQTN 1038
>POMBASE|SPCC1739.03 [details] [associations]
symbol:hrr1 "Helicase Required for RNAi-mediated
heterochromatin assembly Hrr1" species:4896 "Schizosaccharomyces
pombe" [GO:0003723 "RNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0006338 "chromatin remodeling" evidence=NAS] [GO:0030702
"chromatin silencing at centromere" evidence=IMP] [GO:0031048
"chromatin silencing by small RNA" evidence=IMP] [GO:0031379
"RNA-directed RNA polymerase complex" evidence=IDA] [GO:0031380
"nuclear RNA-directed RNA polymerase complex" evidence=IDA]
PomBase:SPCC1739.03 GO:GO:0005829 GO:GO:0005524 GO:GO:0007059
EMBL:CU329672 GenomeReviews:CU329672_GR GO:GO:0003723 GO:GO:0006338
GO:GO:0007049 GO:GO:0030702 GO:GO:0004386 GO:GO:0031048
eggNOG:COG1112 GO:GO:0016585 GO:GO:0031380 PIR:T41111
RefSeq:NP_588411.2 DIP:DIP-29303N STRING:O74465
EnsemblFungi:SPCC1739.03.1 GeneID:2539248 OrthoDB:EOG4DRDMD
NextBio:20800418 Uniprot:O74465
Length = 999
Score = 235 (87.8 bits), Expect = 1.3e-13, Sum P(2) = 1.3e-13
Identities = 77/259 (29%), Positives = 129/259 (49%)
Query: 5 KFVVIDEAAQLKESESAIPLQLPCIQHAILVGDEVQL-PAMVESSVSGEAY-FGRSLFER 62
K I+EAA + E IP P ++ +L+GD QL P ++ + + S+FER
Sbjct: 706 KICFIEEAADVLEGP-IIPAVFPSLEQLVLIGDHKQLRPGCSTYALRQDPFNLSISMFER 764
Query: 63 LSYLGHPKHLLSMQYRMHPSISFFPNSYFYENKIRDAPTVRKRSYEKRFLPGPMYGPYSF 122
L L+MQ RMHP I +S YE+ + D + Y +PG M F
Sbjct: 765 LVENDMEYTRLTMQRRMHPQIRRLVSSV-YED-LSDYEITK---YWPS-IPG-MGEIRRF 817
Query: 123 INVFGGREEFIEHSCR-NMVEVSVVMKILRNLYKAWVESKEKLSIGIVSPYSAQVIAIQE 181
E+ + + N+ E ++++ L VE ++ I ++ Y+AQ I+
Sbjct: 818 FLTHSRIEDNDGFASKINLFEAQMLVQFAVYLINNGVEPQK---ITCLTFYAAQKDLIER 874
Query: 182 KLGSKYEKIAGFAVKVKSIDGFQGGEEDIIIISTVRSNNTGSIGFASTPQRINVALTRAR 241
L + F +KV ++DG+QG E D++++S VR+N+ +GF S+P R+ V+L+RAR
Sbjct: 875 LLSESLNREKHF-IKVATVDGYQGEENDVVLLSLVRNNDRTEVGFLSSPHRVCVSLSRAR 933
Query: 242 HCLWILGSERTLNHSESVW 260
L+I G+ + + S +W
Sbjct: 934 RGLFIFGNAQLVAESNPLW 952
Score = 40 (19.1 bits), Expect = 1.3e-13, Sum P(2) = 1.3e-13
Identities = 9/31 (29%), Positives = 15/31 (48%)
Query: 1682 EAFKKIGNPLVLVSLGDNCPKFACPDAIFVD 1712
+A + N + LGD+ P F I+V+
Sbjct: 954 DAINTLMNDETIQGLGDHLPLFTKDGTIYVN 984
>ZFIN|ZDB-GENE-030131-9089 [details] [associations]
symbol:mov10b.1 "Moloney leukemia virus 10,
homolog, b.1" species:7955 "Danio rerio" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0000932 "cytoplasmic mRNA processing
body" evidence=ISS] [GO:0035279 "mRNA cleavage involved in gene
silencing by miRNA" evidence=ISS] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0031047 "gene silencing by RNA" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR003593
SMART:SM00382 ZFIN:ZDB-GENE-030131-9089 GO:GO:0005524 GO:GO:0003723
GO:GO:0004386 GO:GO:0000932 GO:GO:0035279 eggNOG:COG1112
InterPro:IPR026122 PANTHER:PTHR10887:SF17
GeneTree:ENSGT00550000074391 EMBL:BX323059 EMBL:BC171375
IPI:IPI00801311 RefSeq:NP_001037807.2 UniGene:Dr.74181
ProteinModelPortal:Q1LXK4 STRING:Q1LXK4 Ensembl:ENSDART00000086946
GeneID:556024 KEGG:dre:556024 CTD:556024 HOGENOM:HOG000239755
InParanoid:Q1LXK4 OMA:NLVGECY OrthoDB:EOG4SXNC4 NextBio:20881283
Bgee:Q1LXK4 Uniprot:Q1LXK4
Length = 1013
Score = 219 (82.2 bits), Expect = 1.6e-13, P = 1.6e-13
Identities = 70/205 (34%), Positives = 104/205 (50%)
Query: 73 LSMQYRMHPSISFFPNSYFYENKIRD-APTVRKRSY-EKRFLPGPMYGPYSFINVFGGRE 130
L YR HPSI PN FY+N+++ A + R Y LP + P F V G E
Sbjct: 750 LLQNYRSHPSILKVPNELFYDNELKACADEISSRQYCTWEHLPKRGF-PVIFHGVVGKDE 808
Query: 131 -EFIEHSCRNMVEVSVVMKILRNLYKAWVESK-EKLS---IGIVSPYSAQVIAIQE--KL 183
E S N E+ +M L+ L + K+S IGI++PY QV I++ K+
Sbjct: 809 RESTSPSFFNTSEIDKIMDYLKKLLLTQAKKGIAKISPKDIGIIAPYRKQVEKIRQAIKI 868
Query: 184 GSKYEKIAGFA-VKVKSIDGFQGGEEDIIIISTVRSNNTG-------SIGFASTPQRINV 235
+ + ++G +KV S++ FQG E +II+STVRS+ +IGF +R NV
Sbjct: 869 HRELKSLSGIEELKVGSVEEFQGQERKVIIVSTVRSSKEHIILDDKFNIGFLKNEKRFNV 928
Query: 236 ALTRARHCLWILGSERTLNHSESVW 260
A+TRA+ L ++G+ L E +W
Sbjct: 929 AVTRAKALLIMVGNPIILRTDE-IW 952
>UNIPROTKB|J9NRI6 [details] [associations]
symbol:DNA2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0043142 "single-stranded DNA-dependent ATPase
activity" evidence=IEA] [GO:0033567 "DNA replication, Okazaki
fragment processing" evidence=IEA] [GO:0017108 "5'-flap
endonuclease activity" evidence=IEA] InterPro:IPR026851
InterPro:IPR014001 PROSITE:PS51192 GO:GO:0017108 GO:GO:0043142
GO:GO:0033567 PANTHER:PTHR10887:SF14 GeneTree:ENSGT00550000074852
EMBL:AAEX03002775 EMBL:AAEX03002776 EMBL:AAEX03002777
Ensembl:ENSCAFT00000046272 Uniprot:J9NRI6
Length = 640
Score = 156 (60.0 bits), Expect = 1.9e-13, Sum P(2) = 1.9e-13
Identities = 44/139 (31%), Positives = 74/139 (53%)
Query: 119 PYSFINV--FGGREEFIEHSCRNMVEVSVVMKILRNLYKAWVESKEKLSIGIVSPYSAQV 176
P F+N E+ + N+ E +++ + KA + + IGI++PY Q+
Sbjct: 470 PVCFLNTDKVPAPEQVEKGGVSNITEAKLIVFLTSVFIKAGCKPSD---IGIIAPYRQQL 526
Query: 177 IAIQEKLGSKYEKIAGFAVKVKSIDGFQGGEEDIIIISTVRSNNTGSIG-FASTPQRINV 235
I + L ++ V+V ++D +QG ++ II++S VRSN G IG +R+NV
Sbjct: 527 KIINDLLFHSSIRM----VEVNTVDKYQGRDKSIILVSFVRSNKDGPIGELLKDWRRLNV 582
Query: 236 ALTRARHCLWILGSERTLN 254
A+TRA+H L +LG +LN
Sbjct: 583 AITRAKHKLILLGCVPSLN 601
Score = 114 (45.2 bits), Expect = 1.9e-13, Sum P(2) = 1.9e-13
Identities = 30/91 (32%), Positives = 46/91 (50%)
Query: 6 FVVIDEAAQLKESESAIPLQLPCIQHAILVGDEVQLPAMVESSVSGEAYFGRSLFERLSY 65
F ++DEA+Q+ + PL Q +LVGD QLP +V + + SLF+RL
Sbjct: 337 FCIVDEASQISQPICLGPLFFS--QRFVLVGDHQQLPPLVLNREARALGMSESLFKRLEQ 394
Query: 66 LGHPKHLLSMQYRMHPSISFFPNSYFYENKI 96
+ L++QYRM+ I N Y+ K+
Sbjct: 395 NKNAVVQLTVQYRMNSKIMSLSNKLTYDGKL 425
>UNIPROTKB|E1BMP7 [details] [associations]
symbol:DNA2 "DNA replication ATP-dependent
helicase/nuclease DNA2" species:9913 "Bos taurus" [GO:0043142
"single-stranded DNA-dependent ATPase activity" evidence=ISS]
[GO:0043139 "5'-3' DNA helicase activity" evidence=ISS] [GO:0017108
"5'-flap endonuclease activity" evidence=ISS] [GO:0004518 "nuclease
activity" evidence=ISS] [GO:0003678 "DNA helicase activity"
evidence=ISS] [GO:0003677 "DNA binding" evidence=ISS] [GO:0033567
"DNA replication, Okazaki fragment processing" evidence=ISS]
[GO:0006260 "DNA replication" evidence=ISS] [GO:0000729 "DNA
double-strand break processing" evidence=ISS] [GO:0000076 "DNA
replication checkpoint" evidence=ISS] [GO:0005634 "nucleus"
evidence=IEA] [GO:0045740 "positive regulation of DNA replication"
evidence=IEA] [GO:0043504 "mitochondrial DNA repair" evidence=IEA]
[GO:0043137 "DNA replication, removal of RNA primer" evidence=IEA]
[GO:0042645 "mitochondrial nucleoid" evidence=IEA] [GO:0016890
"site-specific endodeoxyribonuclease activity, specific for altered
base" evidence=IEA] [GO:0006284 "base-excision repair"
evidence=IEA] [GO:0006264 "mitochondrial DNA replication"
evidence=IEA] [GO:0005760 "gamma DNA polymerase complex"
evidence=IEA] [GO:0051539 "4 iron, 4 sulfur cluster binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR026851
InterPro:IPR014808 Pfam:PF08696 GO:GO:0005524 GO:GO:0005634
GO:GO:0046872 GO:GO:0006284 GO:GO:0003677 GO:GO:0051539
GO:GO:0042645 GO:GO:0016890 GO:GO:0045740 GO:GO:0000729
GO:GO:0017108 GO:GO:0000076 GO:GO:0043137 EMBL:DAAA02061817
IPI:IPI00688022 NextBio:20878938 GO:GO:0005760 GO:GO:0043139
GO:GO:0043142 GO:GO:0033567 GO:GO:0043504 GO:GO:0006264
PANTHER:PTHR10887:SF14 Uniprot:E1BMP7
Length = 1061
Score = 159 (61.0 bits), Expect = 3.6e-13, Sum P(2) = 3.6e-13
Identities = 43/139 (30%), Positives = 76/139 (54%)
Query: 119 PYSFINVFG--GREEFIEHSCRNMVEVSVVMKILRNLYKAWVESKEKLSIGIVSPYSAQV 176
P F+N E+ + N++E +V+ + KA + + IGI++PY Q+
Sbjct: 891 PVCFLNTHKVPAPEQVEKGGVSNIMEAKLVVFLTSVFIKAGCKPSD---IGIIAPYRQQL 947
Query: 177 IAIQEKLGSKYEKIAGFAVKVKSIDGFQGGEEDIIIISTVRSNNTGSIG-FASTPQRINV 235
I + L + G V+V ++D +QG ++ I+++S VRSN G++G +R+NV
Sbjct: 948 KVISDLLA---QSSVGM-VEVNTVDRYQGRDKSIVVVSFVRSNEDGTLGELLKDWRRLNV 1003
Query: 236 ALTRARHCLWILGSERTLN 254
A+TRA+H L +LG +L+
Sbjct: 1004 AITRAKHKLILLGCVPSLS 1022
Score = 114 (45.2 bits), Expect = 3.6e-13, Sum P(2) = 3.6e-13
Identities = 30/91 (32%), Positives = 46/91 (50%)
Query: 6 FVVIDEAAQLKESESAIPLQLPCIQHAILVGDEVQLPAMVESSVSGEAYFGRSLFERLSY 65
F ++DEA+Q+ + PL + +LVGD QLP +V + + SLF+RL
Sbjct: 758 FCIVDEASQISQPVCLGPLFFS--RRFVLVGDHQQLPPLVLNREARALGMSESLFKRLEQ 815
Query: 66 LGHPKHLLSMQYRMHPSISFFPNSYFYENKI 96
+ L++QYRM+ I N YE K+
Sbjct: 816 NKNAVVQLTVQYRMNSKIMSLSNKLTYEGKL 846
>UNIPROTKB|K7DXW3 [details] [associations]
symbol:DNA2 "DNA replication nuclease DNA2" species:9913
"Bos taurus" [GO:0043142 "single-stranded DNA-dependent ATPase
activity" evidence=IEA] [GO:0033567 "DNA replication, Okazaki
fragment processing" evidence=IEA] [GO:0017108 "5'-flap
endonuclease activity" evidence=IEA] InterPro:IPR026851
InterPro:IPR014808 Pfam:PF08696 EMBL:DAAA02061817
PANTHER:PTHR10887:SF14 GeneTree:ENSGT00550000074852
Ensembl:ENSBTAT00000003395 Uniprot:K7DXW3
Length = 1137
Score = 159 (61.0 bits), Expect = 4.2e-13, Sum P(2) = 4.2e-13
Identities = 43/139 (30%), Positives = 76/139 (54%)
Query: 119 PYSFINVFG--GREEFIEHSCRNMVEVSVVMKILRNLYKAWVESKEKLSIGIVSPYSAQV 176
P F+N E+ + N++E +V+ + KA + + IGI++PY Q+
Sbjct: 967 PVCFLNTHKVPAPEQVEKGGVSNIMEAKLVVFLTSVFIKAGCKPSD---IGIIAPYRQQL 1023
Query: 177 IAIQEKLGSKYEKIAGFAVKVKSIDGFQGGEEDIIIISTVRSNNTGSIG-FASTPQRINV 235
I + L + G V+V ++D +QG ++ I+++S VRSN G++G +R+NV
Sbjct: 1024 KVISDLLA---QSSVGM-VEVNTVDRYQGRDKSIVVVSFVRSNEDGTLGELLKDWRRLNV 1079
Query: 236 ALTRARHCLWILGSERTLN 254
A+TRA+H L +LG +L+
Sbjct: 1080 AITRAKHKLILLGCVPSLS 1098
Score = 114 (45.2 bits), Expect = 4.2e-13, Sum P(2) = 4.2e-13
Identities = 30/91 (32%), Positives = 46/91 (50%)
Query: 6 FVVIDEAAQLKESESAIPLQLPCIQHAILVGDEVQLPAMVESSVSGEAYFGRSLFERLSY 65
F ++DEA+Q+ + PL + +LVGD QLP +V + + SLF+RL
Sbjct: 834 FCIVDEASQISQPVCLGPLFFS--RRFVLVGDHQQLPPLVLNREARALGMSESLFKRLEQ 891
Query: 66 LGHPKHLLSMQYRMHPSISFFPNSYFYENKI 96
+ L++QYRM+ I N YE K+
Sbjct: 892 NKNAVVQLTVQYRMNSKIMSLSNKLTYEGKL 922
>UNIPROTKB|F6UZP1 [details] [associations]
symbol:DNA2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0043142 "single-stranded DNA-dependent ATPase
activity" evidence=IEA] [GO:0033567 "DNA replication, Okazaki
fragment processing" evidence=IEA] [GO:0017108 "5'-flap
endonuclease activity" evidence=IEA] InterPro:IPR026851
InterPro:IPR014808 Pfam:PF08696 InterPro:IPR014001 PROSITE:PS51192
GO:GO:0017108 GO:GO:0043142 GO:GO:0033567 PANTHER:PTHR10887:SF14
GeneTree:ENSGT00550000074852 OMA:EHESLCH Ensembl:ENSCAFT00000021752
EMBL:AAEX03002775 EMBL:AAEX03002776 EMBL:AAEX03002777
Uniprot:F6UZP1
Length = 1021
Score = 156 (60.0 bits), Expect = 6.7e-13, Sum P(2) = 6.7e-13
Identities = 44/139 (31%), Positives = 74/139 (53%)
Query: 119 PYSFINV--FGGREEFIEHSCRNMVEVSVVMKILRNLYKAWVESKEKLSIGIVSPYSAQV 176
P F+N E+ + N+ E +++ + KA + + IGI++PY Q+
Sbjct: 859 PVCFLNTDKVPAPEQVEKGGVSNITEAKLIVFLTSVFIKAGCKPSD---IGIIAPYRQQL 915
Query: 177 IAIQEKLGSKYEKIAGFAVKVKSIDGFQGGEEDIIIISTVRSNNTGSIG-FASTPQRINV 235
I + L ++ V+V ++D +QG ++ II++S VRSN G IG +R+NV
Sbjct: 916 KIINDLLFHSSIRM----VEVNTVDKYQGRDKSIILVSFVRSNKDGPIGELLKDWRRLNV 971
Query: 236 ALTRARHCLWILGSERTLN 254
A+TRA+H L +LG +LN
Sbjct: 972 AITRAKHKLILLGCVPSLN 990
Score = 114 (45.2 bits), Expect = 6.7e-13, Sum P(2) = 6.7e-13
Identities = 30/91 (32%), Positives = 46/91 (50%)
Query: 6 FVVIDEAAQLKESESAIPLQLPCIQHAILVGDEVQLPAMVESSVSGEAYFGRSLFERLSY 65
F ++DEA+Q+ + PL Q +LVGD QLP +V + + SLF+RL
Sbjct: 726 FCIVDEASQISQPICLGPLFFS--QRFVLVGDHQQLPPLVLNREARALGMSESLFKRLEQ 783
Query: 66 LGHPKHLLSMQYRMHPSISFFPNSYFYENKI 96
+ L++QYRM+ I N Y+ K+
Sbjct: 784 NKNAVVQLTVQYRMNSKIMSLSNKLTYDGKL 814
>UNIPROTKB|E2QSH2 [details] [associations]
symbol:E2QSH2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0043142 "single-stranded DNA-dependent ATPase
activity" evidence=IEA] [GO:0033567 "DNA replication, Okazaki
fragment processing" evidence=IEA] [GO:0017108 "5'-flap
endonuclease activity" evidence=IEA] InterPro:IPR026851
InterPro:IPR014808 Pfam:PF08696 InterPro:IPR014001 PROSITE:PS51192
GO:GO:0017108 GO:GO:0043142 GO:GO:0033567 PANTHER:PTHR10887:SF14
Ensembl:ENSCAFT00000021752 Uniprot:E2QSH2
Length = 1040
Score = 156 (60.0 bits), Expect = 7.0e-13, Sum P(2) = 7.0e-13
Identities = 44/139 (31%), Positives = 74/139 (53%)
Query: 119 PYSFINV--FGGREEFIEHSCRNMVEVSVVMKILRNLYKAWVESKEKLSIGIVSPYSAQV 176
P F+N E+ + N+ E +++ + KA + + IGI++PY Q+
Sbjct: 890 PVCFLNTDKVPAPEQVEKGGVSNITEAKLIVFLTSVFIKAGCKPSD---IGIIAPYRQQL 946
Query: 177 IAIQEKLGSKYEKIAGFAVKVKSIDGFQGGEEDIIIISTVRSNNTGSIG-FASTPQRINV 235
I + L ++ V+V ++D +QG ++ II++S VRSN G IG +R+NV
Sbjct: 947 KIINDLLFHSSIRM----VEVNTVDKYQGRDKSIILVSFVRSNKDGPIGELLKDWRRLNV 1002
Query: 236 ALTRARHCLWILGSERTLN 254
A+TRA+H L +LG +LN
Sbjct: 1003 AITRAKHKLILLGCVPSLN 1021
Score = 114 (45.2 bits), Expect = 7.0e-13, Sum P(2) = 7.0e-13
Identities = 30/91 (32%), Positives = 46/91 (50%)
Query: 6 FVVIDEAAQLKESESAIPLQLPCIQHAILVGDEVQLPAMVESSVSGEAYFGRSLFERLSY 65
F ++DEA+Q+ + PL Q +LVGD QLP +V + + SLF+RL
Sbjct: 757 FCIVDEASQISQPICLGPLFFS--QRFVLVGDHQQLPPLVLNREARALGMSESLFKRLEQ 814
Query: 66 LGHPKHLLSMQYRMHPSISFFPNSYFYENKI 96
+ L++QYRM+ I N Y+ K+
Sbjct: 815 NKNAVVQLTVQYRMNSKIMSLSNKLTYDGKL 845
>MGI|MGI:2443732 [details] [associations]
symbol:Dna2 "DNA replication helicase 2 homolog (yeast)"
species:10090 "Mus musculus" [GO:0000076 "DNA replication
checkpoint" evidence=ISO] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000729 "DNA double-strand break processing"
evidence=ISO] [GO:0003677 "DNA binding" evidence=ISO] [GO:0003678
"DNA helicase activity" evidence=ISO] [GO:0003824 "catalytic
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0004518 "nuclease activity" evidence=ISO]
[GO:0004519 "endonuclease activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0006260 "DNA
replication" evidence=ISO] [GO:0006264 "mitochondrial DNA
replication" evidence=ISO] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0006284 "base-excision repair" evidence=ISO] [GO:0006974
"response to DNA damage stimulus" evidence=IEA] [GO:0008152
"metabolic process" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0016890 "site-specific endodeoxyribonuclease
activity, specific for altered base" evidence=ISO] [GO:0017108
"5'-flap endonuclease activity" evidence=ISO] [GO:0032508 "DNA
duplex unwinding" evidence=ISO] [GO:0033567 "DNA replication,
Okazaki fragment processing" evidence=ISO] [GO:0042645
"mitochondrial nucleoid" evidence=ISO] [GO:0043137 "DNA
replication, removal of RNA primer" evidence=ISO] [GO:0043139
"5'-3' DNA helicase activity" evidence=ISO] [GO:0043142
"single-stranded DNA-dependent ATPase activity" evidence=ISO]
[GO:0043504 "mitochondrial DNA repair" evidence=ISO] [GO:0045740
"positive regulation of DNA replication" evidence=ISO] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0051536 "iron-sulfur cluster
binding" evidence=IEA] [GO:0051539 "4 iron, 4 sulfur cluster
binding" evidence=IEA] InterPro:IPR026851 InterPro:IPR014808
MGI:MGI:2443732 Pfam:PF08696 GO:GO:0005524 GO:GO:0005634
GO:GO:0046872 GO:GO:0006284 GO:GO:0003677 GO:GO:0051539
GO:GO:0042645 GO:GO:0016890 eggNOG:COG1112 GO:GO:0045740
GO:GO:0000729 GO:GO:0017108 GO:GO:0000076 GO:GO:0043137
GO:GO:0005760 GO:GO:0043139 GO:GO:0043142 GO:GO:0043504
GO:GO:0006264 PANTHER:PTHR10887:SF14 CTD:1763 HOGENOM:HOG000168456
HOVERGEN:HBG081456 KO:K10742 EMBL:AK129051 EMBL:AK028381
EMBL:BC025182 EMBL:BC115716 IPI:IPI00224915 IPI:IPI00816966
RefSeq:NP_796346.2 UniGene:Mm.21492 ProteinModelPortal:Q6ZQJ5
SMR:Q6ZQJ5 STRING:Q6ZQJ5 PaxDb:Q6ZQJ5 PRIDE:Q6ZQJ5
Ensembl:ENSMUST00000092462 Ensembl:ENSMUST00000131422 GeneID:327762
KEGG:mmu:327762 UCSC:uc007fji.2 UCSC:uc007fjj.2
GeneTree:ENSGT00550000074852 InParanoid:Q6ZQJ5 OMA:EHESLCH
ChiTaRS:DNA2 NextBio:397947 Bgee:Q6ZQJ5 CleanEx:MM_DNA2
Genevestigator:Q6ZQJ5 GermOnline:ENSMUSG00000036875 Uniprot:Q6ZQJ5
Length = 1062
Score = 164 (62.8 bits), Expect = 9.0e-13, Sum P(2) = 9.0e-13
Identities = 47/161 (29%), Positives = 80/161 (49%)
Query: 119 PYSFINV--FGGREEFIEHSCRNMVEVSVVMKILRNLYKAWVESKEKLSIGIVSPYSAQV 176
P F+N E+ N+ E +++ + KA + IG+++PY Q+
Sbjct: 892 PVCFLNTDKVPAPEQVENGGVSNVTEARLIVFLTSTFIKAGCSPSD---IGVIAPYRQQL 948
Query: 177 IAIQEKLGSKYEKIAGFAVKVKSIDGFQGGEEDIIIISTVRSNNTGSIG-FASTPQRINV 235
I + L G V+V ++D +QG ++ +I++S VRSN G++G +R+NV
Sbjct: 949 RIISDLLA---RSSVGM-VEVNTVDKYQGRDKSLILVSFVRSNEDGTLGELLKDWRRLNV 1004
Query: 236 ALTRARHCLWILGSERTLNHSESVWESLLDDAKARQCFFNI 276
ALTRA+H L +LGS +L + +L D A Q ++
Sbjct: 1005 ALTRAKHKLILLGSVSSLKRFPPLG-TLFDHLNAEQLILDL 1044
Score = 105 (42.0 bits), Expect = 9.0e-13, Sum P(2) = 9.0e-13
Identities = 29/91 (31%), Positives = 44/91 (48%)
Query: 6 FVVIDEAAQLKESESAIPLQLPCIQHAILVGDEVQLPAMVESSVSGEAYFGRSLFERLSY 65
F ++DEA+Q+ + PL + +LVGD QLP +V + + SLF+RL
Sbjct: 759 FCIVDEASQISQPVCLGPLFFS--RRFVLVGDHQQLPPLVVNREARALGMSESLFKRLER 816
Query: 66 LGHPKHLLSMQYRMHPSISFFPNSYFYENKI 96
L++QYRM+ I N Y K+
Sbjct: 817 NESAVVQLTVQYRMNRKIMSLSNKLTYAGKL 847
>CGD|CAL0001700 [details] [associations]
symbol:orf19.702 species:5476 "Candida albicans" [GO:0003678
"DNA helicase activity" evidence=IEA] [GO:0005844 "polysome"
evidence=IEA] [GO:0006449 "regulation of translational termination"
evidence=IEA] InterPro:IPR003593 InterPro:IPR007087
InterPro:IPR015880 PROSITE:PS00028 PROSITE:PS50157 SMART:SM00355
SMART:SM00382 CGD:CAL0001700 GO:GO:0005524 GO:GO:0008270
GO:GO:0005622 GO:GO:0017111 eggNOG:COG1112 EMBL:AACQ01000183
EMBL:AACQ01000182 RefSeq:XP_711775.1 RefSeq:XP_711793.1
ProteinModelPortal:Q59PZ8 GeneID:3646609 GeneID:3646623
KEGG:cal:CaO19.702 KEGG:cal:CaO19.8321 Uniprot:Q59PZ8
Length = 1105
Score = 208 (78.3 bits), Expect = 2.6e-12, P = 2.6e-12
Identities = 63/186 (33%), Positives = 91/186 (48%)
Query: 1 MEQLKFVVIDEAAQLKESESAIPLQLPCIQHAILVGDEVQLPAMVESSVSGEAYFGRSLF 60
+ ++ V+IDEA Q E + IPL LP ++ +LVGD+ QL S + SLF
Sbjct: 801 LNNVRVVIIDEATQSSEPTTLIPLALPSVEKLVLVGDQKQLSCF--SLIPN---LSLSLF 855
Query: 61 ERLSYLGHPK--HLLSMQYRMHPSISFFPNSYFYENKIRDAPTVRKRSYEKRFLPGPMYG 118
ER+ G K H+L QYRMHP IS FP + FY ++D R E + P+Y
Sbjct: 856 ERVLLNGTYKTPHMLDTQYRMHPEISEFPRTKFYGGLLKDGIDANARQSEG-VISSPLY- 913
Query: 119 PYSFINVFGG-REEFIEHSCR--------NMVEVSVVMKILRNLYKAWVESKEKLSIGIV 169
F + G RE+ + + R N E+ + ++LR L E+ IGI+
Sbjct: 914 ---FWDTKGNAREQSVRNFLREDGGYTYTNRDEIGYIQQVLRTLIITKGVKPEQ--IGII 968
Query: 170 SPYSAQ 175
+PYS Q
Sbjct: 969 TPYSGQ 974
Score = 171 (65.3 bits), Expect = 2.4e-08, P = 2.4e-08
Identities = 75/287 (26%), Positives = 133/287 (46%)
Query: 5 KFVVIDEAAQLKESESAIP-LQLPCIQHAILVGDEVQLPAMVESSVSGEAYFGRSLFERL 63
K V++ + QL S IP L L + +L G + P M+++ S F R
Sbjct: 831 KLVLVGDQKQLS-CFSLIPNLSLSLFERVLLNGT-YKTPHMLDTQYRMHPEI--SEFPRT 886
Query: 64 SYLGHP-KHLLSMQYRMHPSISFFPNSYFYENKIRDAPTVRKRSYEKRFLPGPMYGPYSF 122
+ G K + R + P YF++ K R++S + FL G Y++
Sbjct: 887 KFYGGLLKDGIDANARQSEGVISSP-LYFWDTK----GNAREQSV-RNFLRED--GGYTY 938
Query: 123 INVFGGREE--FIEHSCRNMVEVSVVMKILRNLYKAWVESKEKLSI-----GIVSPYSAQ 175
N R+E +I+ R ++ V + + ++ +S +++P + Q
Sbjct: 939 TN----RDEIGYIQQVLRTLIITKGVKPEQIGIITPYSGQRDLISATLVKDDVINPSNEQ 994
Query: 176 V---IAIQE-KLGSKYEKIAGFA-VKVKSIDGFQGGEEDIIIISTVRSNNTGSIGFASTP 230
+ + I + K SK I + + + SID FQG E+D +I+S VRSN G IGF
Sbjct: 995 MKTEVDIDDLKNDSKPVTIHIVSGIMIASIDAFQGREKDYMIMSCVRSNTKGVIGFLRDE 1054
Query: 231 QRINVALTRARHCLWILGSERTLNHSESVWESLLDDAKARQCFFNID 277
+R+NVALTRA++ L ++G ++ L + + +W+ L +++ + D
Sbjct: 1055 RRLNVALTRAKYGLIMVGDKKCLQNGDKLWKEYLQYLDSKKAIHDND 1101
>ZFIN|ZDB-GENE-060526-371 [details] [associations]
symbol:mov10b.2 "Moloney leukemia virus 10,
homolog, b.2" species:7955 "Danio rerio" [GO:0000932 "cytoplasmic
mRNA processing body" evidence=ISS] [GO:0035279 "mRNA cleavage
involved in gene silencing by miRNA" evidence=ISS] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0031047 "gene silencing by RNA" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] ZFIN:ZDB-GENE-060526-371
GO:GO:0005524 GO:GO:0003723 GO:GO:0004386 GO:GO:0000932
GO:GO:0035279 eggNOG:COG1112 InterPro:IPR026122
PANTHER:PTHR10887:SF17 GeneTree:ENSGT00550000074391 EMBL:BX323059
HOGENOM:HOG000239755 OrthoDB:EOG4SXNC4 IPI:IPI00611260
RefSeq:NP_001037805.1 UniGene:Dr.94434 ProteinModelPortal:Q1LXK5
Ensembl:ENSDART00000078491 GeneID:555950 KEGG:dre:555950 CTD:555950
InParanoid:Q1LXK5 NextBio:20881245 Uniprot:Q1LXK5
Length = 1015
Score = 205 (77.2 bits), Expect = 4.9e-12, P = 4.9e-12
Identities = 67/210 (31%), Positives = 103/210 (49%)
Query: 73 LSMQYRMHPSISFFPNSYFYENKIRD-APTVRKRSYEK-RFLPGPMYGPYSFINVFGGRE 130
L M YR HP I PN FY+ +++ A + Y LP + P F V G E
Sbjct: 755 LIMNYRSHPYILEVPNRLFYDGELKACADEISSNQYCMWEHLPSKGF-PVIFHGVPGKDE 813
Query: 131 -EFIEHSCRNMVEVSVVMKILRNLY----KAWVESKEKLSIGIVSPYSAQVIAIQEKLGS 185
E S N+ E+++++ L+ L K + IGI++PY QV I+ + +
Sbjct: 814 RESNSPSFFNIYEINILVDYLKKLLLTQPKKGISRIFPKDIGIIAPYRKQVEKIKRAIDA 873
Query: 186 K--YEKIAGFA-VKVKSIDGFQGGEEDIIIISTVRSN-------NTGSIGFASTPQRINV 235
++ G +KV S++ FQG E +I++STVRS+ T +IGF +R NV
Sbjct: 874 DKDFQDYMGIDNLKVGSVEEFQGQERKVIMVSTVRSSVKYISLDETFNIGFLKNEKRFNV 933
Query: 236 ALTRARHCLWILGSERTLNHSESVWESLLD 265
A+TRA+ L ++G+ L ES W +D
Sbjct: 934 AVTRAKSLLIMVGNPMILRTDES-WGRFID 962
>UNIPROTKB|F1PYQ4 [details] [associations]
symbol:DNA2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0043142 "single-stranded DNA-dependent ATPase
activity" evidence=IEA] [GO:0033567 "DNA replication, Okazaki
fragment processing" evidence=IEA] [GO:0017108 "5'-flap
endonuclease activity" evidence=IEA] InterPro:IPR026851
InterPro:IPR014808 Pfam:PF08696 InterPro:IPR014001 PROSITE:PS51192
GO:GO:0017108 GO:GO:0043142 GO:GO:0033567 PANTHER:PTHR10887:SF14
GeneTree:ENSGT00550000074852 EMBL:AAEX03002775 EMBL:AAEX03002776
EMBL:AAEX03002777 Ensembl:ENSCAFT00000036654 Uniprot:F1PYQ4
Length = 997
Score = 204 (76.9 bits), Expect = 6.2e-12, P = 6.2e-12
Identities = 74/251 (29%), Positives = 121/251 (48%)
Query: 6 FVVIDEAAQLKESESAIPLQLPCIQHAILVGDEVQLPAMVESSVSGEAYFGRSLFERLSY 65
F ++DEA+Q+ + PL Q +LVGD QLP +V + + SLF+RL
Sbjct: 730 FCIVDEASQISQPICLGPLFFS--QRFVLVGDHQQLPPLVLNREARALGMSESLFKRLEQ 787
Query: 66 LGHPKHLLSMQYRMHPSISFFPNSYFYENKIRDAPTVRKRSYEKRFLPGPMYGPYSFINV 125
+ L++QYRM+ I N Y+ K+ + LP + +
Sbjct: 788 NKNAVVQLTVQYRMNSKIMSLSNKLTYDGKLECGSDKVANAVVN--LPN-LKDVKLELEF 844
Query: 126 FGGREEFIEHSCR-NMVEVSVVMKILRNLYKAWVESKEKLSIGIVSPYSAQVIAIQEKLG 184
+ ++ E+ E + + L N KA + + IGI++PY Q+ I + L
Sbjct: 845 YA---DYSENPWMIGAFEPNNPVCFL-NTDKAGCKPSD---IGIIAPYRQQLKIINDLLF 897
Query: 185 SKYEKIAGFAVKVKSIDGFQGGEEDIIIISTVRSNNTGSIG-FASTPQRINVALTRARHC 243
++ V+V ++D +QG ++ II++S VRSN G IG +R+NVA+TRA+H
Sbjct: 898 HSSIRM----VEVNTVDKYQGRDKSIILVSFVRSNKDGPIGELLKDWRRLNVAITRAKHK 953
Query: 244 LWILGSERTLN 254
L +LG +LN
Sbjct: 954 LILLGCVPSLN 964
>DICTYBASE|DDB_G0274797 [details] [associations]
symbol:aqr "intron-binding protein aquarius homolog"
species:44689 "Dictyostelium discoideum" [GO:0097157 "pre-mRNA
intronic binding" evidence=IEA] [GO:0005681 "spliceosomal complex"
evidence=IEA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR024860 dictyBase:DDB_G0274797
GenomeReviews:CM000151_GR GO:GO:0005681 EMBL:AAFI02000012
GO:GO:0000398 eggNOG:COG1112 KO:K12874 OMA:RTKAVGH GO:GO:0097157
PANTHER:PTHR10887:SF5 RefSeq:XP_643918.1 ProteinModelPortal:Q555Z2
PRIDE:Q555Z2 EnsemblProtists:DDB0233439 GeneID:8619345
KEGG:ddi:DDB_G0274797 InParanoid:Q555Z2 ProtClustDB:CLSZ2431000
Uniprot:Q555Z2
Length = 1487
Score = 202 (76.2 bits), Expect = 3.1e-11, Sum P(2) = 3.1e-11
Identities = 73/232 (31%), Positives = 123/232 (53%)
Query: 29 IQHAILVGDEVQLPAMVES-SVSGEAYFGRSLFERLSYLGHPKHLLSMQYRMHPSIS-FF 86
++ IL+GD QLP +V++ S++ ++F +SLF RL L P L Q R PSIS F
Sbjct: 1195 LKRVILIGDHNQLPPIVQNQSLAKYSHFDQSLFTRLIRLEIPHITLDRQGRSRPSISELF 1254
Query: 87 PNSYFYENKIRDAPTVRKRSYEKRFLPGPMYGPYSFINV-----FG-GREEFIEHSCRNM 140
S+ Y+ ++D P V+++ K PG Y Y INV +G G E + +N+
Sbjct: 1255 --SWKYKG-LQDLPLVKEQLQFKLANPGLAYD-YQLINVDESDGYGVGESEPTPYFYQNL 1310
Query: 141 VEVSVVMKILRNLYKAWVESKEKLSIGIVSPYSAQVIAIQEKLGSKY-----EKIA-GFA 194
E ++ + + L S EK+++ ++ Y+ Q +++ +K +K G
Sbjct: 1311 GEAEYIVAMFQYLIAIGYPS-EKITV--LTTYNGQKNLLRDVFKAKCTPQDPKKTQYGLP 1367
Query: 195 VKVKSIDGFQGGEEDIIIISTVRSNNTGSIGFASTPQRINVALTRARHCLWI 246
+K+ +ID +QG + DII++S VR+ G I +R+ VA++RAR L+I
Sbjct: 1368 LKITTIDKYQGQQNDIILLSLVRTKQYGHI---RDVRRLIVAMSRARLGLYI 1416
Score = 55 (24.4 bits), Expect = 3.1e-11, Sum P(2) = 3.1e-11
Identities = 13/33 (39%), Positives = 22/33 (66%)
Query: 7 VVIDEAAQLKESESAIPLQLPCIQHAILVGDEV 39
++++E+AQ+ + ES IPLQL + I GD +
Sbjct: 1145 LLMEESAQISDIESFIPLQLQLNSNEI--GDAI 1175
>UNIPROTKB|F1NWZ8 [details] [associations]
symbol:DNA2 "DNA replication ATP-dependent
helicase/nuclease DNA2" species:9031 "Gallus gallus" [GO:0000076
"DNA replication checkpoint" evidence=IEA] [GO:0000729 "DNA
double-strand break processing" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005760 "gamma DNA polymerase complex"
evidence=IEA] [GO:0006264 "mitochondrial DNA replication"
evidence=IEA] [GO:0006284 "base-excision repair" evidence=IEA]
[GO:0016890 "site-specific endodeoxyribonuclease activity, specific
for altered base" evidence=IEA] [GO:0017108 "5'-flap endonuclease
activity" evidence=IEA] [GO:0042645 "mitochondrial nucleoid"
evidence=IEA] [GO:0043137 "DNA replication, removal of RNA primer"
evidence=IEA] [GO:0043139 "5'-3' DNA helicase activity"
evidence=IEA] [GO:0043142 "single-stranded DNA-dependent ATPase
activity" evidence=IEA] [GO:0043504 "mitochondrial DNA repair"
evidence=IEA] [GO:0045740 "positive regulation of DNA replication"
evidence=IEA] InterPro:IPR026851 InterPro:IPR014808 Pfam:PF08696
GO:GO:0005634 GO:GO:0006284 GO:GO:0042645 GO:GO:0016890
GO:GO:0045740 GO:GO:0017108 GO:GO:0043137 GO:GO:0005760
GO:GO:0043142 GO:GO:0043504 GO:GO:0006264 PANTHER:PTHR10887:SF14
EMBL:AADN02028013 GeneTree:ENSGT00550000074852 OMA:EHESLCH
IPI:IPI00584167 Ensembl:ENSGALT00000006429 ArrayExpress:F1NWZ8
Uniprot:F1NWZ8
Length = 1009
Score = 195 (73.7 bits), Expect = 5.8e-11, P = 5.8e-11
Identities = 69/244 (28%), Positives = 113/244 (46%)
Query: 2 EQLKFVVIDEAAQLKESESAIPLQLPCIQHAILVGDEVQLPAMVESSVSGEAYFGRSLFE 61
+Q F ++DEA+Q+ + PL C + +LVGD QLP +V++S + + SLF+
Sbjct: 772 KQFDFCIVDEASQISQPICLGPLF--CSKRFVLVGDHQQLPPLVQNSEARDLGMSESLFK 829
Query: 62 RLSYLGHPKHLLSMQYRMHPSISFFPNSYFYENKIR-----------DAPTVRKRSYE-- 108
RL + L++QYRM+ I N YE K+ + P ++ E
Sbjct: 830 RLEQNQNAVVQLTVQYRMNSKIMSLSNKLVYEGKLECGSEKVSNATANLPNLKMLKLEFA 889
Query: 109 ---KRFLPGPMYG--PYSFINV--FGGREEFIEHSCRNMVEVSVVMKILRNLYKAWVESK 161
K +L + P F+N E + N+ E +V + KA
Sbjct: 890 DASKTWLKEVLEPDKPVCFLNTEKVPAPEHTEKGGVCNVTEAKLVFFLTTLFIKAGCRPS 949
Query: 162 EKLSIGIVSPYSAQVIAIQEKLGSKYEKIAGFAVKVKSIDGFQGGEEDIIIISTVRSNNT 221
+ IGI+SPY Q+ I + + E V+V +ID +QG ++ III+S VR++N
Sbjct: 950 D---IGIISPYRHQLKVITDLMARLKEN----RVEVNTIDKYQGRDKSIIIVSFVRNSND 1002
Query: 222 GSIG 225
++G
Sbjct: 1003 ENLG 1006
>UNIPROTKB|Q4S102 [details] [associations]
symbol:GSTENG00025786001 "Chromosome 5 SCAF14773, whole
genome shotgun sequence." species:99883 "Tetraodon nigroviridis"
[GO:0006264 "mitochondrial DNA replication" evidence=ISS]
[GO:0006284 "base-excision repair" evidence=ISS] [GO:0016890
"site-specific endodeoxyribonuclease activity, specific for altered
base" evidence=ISS] [GO:0017108 "5'-flap endonuclease activity"
evidence=ISS] [GO:0043137 "DNA replication, removal of RNA primer"
evidence=ISS] [GO:0045740 "positive regulation of DNA replication"
evidence=ISS] [GO:0005760 "gamma DNA polymerase complex"
evidence=ISS] InterPro:IPR026851 InterPro:IPR014808 Pfam:PF08696
GO:GO:0006284 GO:GO:0016890 eggNOG:COG1112 GO:GO:0045740
GO:GO:0017108 GO:GO:0043137 GO:GO:0043142 GO:GO:0006264
PANTHER:PTHR10887:SF14 HOVERGEN:HBG081456 EMBL:CAAE01014773
ProteinModelPortal:Q4S102 STRING:Q4S102 Uniprot:Q4S102
Length = 1043
Score = 195 (73.7 bits), Expect = 6.0e-11, P = 6.0e-11
Identities = 79/277 (28%), Positives = 128/277 (46%)
Query: 6 FVVIDEAAQLKESESAIPLQLPCIQHAILVGDEVQLPAMVESSVSGEAYFGRSLFERLSY 65
F ++DEA+Q+ + PL + +LVGD QLP +V++ + SLF+RL
Sbjct: 764 FCIVDEASQISQPVCVGPLFYA--RRFVLVGDHQQLPPIVQNQEARSLGMDESLFKRLEL 821
Query: 66 LGHPKHLLSMQYRMHPSISFFPNSYFYENKIRDAPTVRKRSY-EKRFLPG--PMYGPYSF 122
L++QYRM+ I NS YE ++ S LP P G ++
Sbjct: 822 HRDAVVQLNVQYRMNRQIMSLSNSLMYEGRLECGSERTATSLITLPLLPSVLPELGSLAW 881
Query: 123 INVF---GGREEFIEHSCRNMVE------VS--VVMKILRNLYKAWVESKEKLS-IGIVS 170
I F++ S +E +S ++ L +++ K IG+++
Sbjct: 882 IQATLLPSNPVCFLDCSAVPALETVEQGGISNHTEAALIHKLLLLLIKAGCKPGDIGVIA 941
Query: 171 PYSAQVIAIQEKLGSKYEKIAGFAVKVKSIDGFQGGEEDIIIISTVRSN-NTGSIG-FAS 228
PY Q+ I L + A V+V ++D +QG ++ +I++S VRS G +G
Sbjct: 942 PYRQQLRTISGLLQAS----AFTGVEVNTVDRYQGRDKSLILLSFVRSTAEEGPLGELLK 997
Query: 229 TPQRINVALTRARHCLWILGSERTLNHSESVWESLLD 265
+R+NVA+TRA+ L +LGS TL V E LL+
Sbjct: 998 DWRRLNVAITRAKSKLLMLGSATTLRRYAPV-EKLLN 1033
>FB|FBgn0051368 [details] [associations]
symbol:CG31368 species:7227 "Drosophila melanogaster"
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IEA;IC]
[GO:0097157 "pre-mRNA intronic binding" evidence=IEA] [GO:0071011
"precatalytic spliceosome" evidence=IDA] [GO:0071013 "catalytic
step 2 spliceosome" evidence=IDA] InterPro:IPR024860
InterPro:IPR026300 PIRSF:PIRSF038901 EMBL:AE014297 GO:GO:0016787
GO:GO:0071011 GO:GO:0000398 eggNOG:COG1112 KO:K12874 OMA:RTKAVGH
GO:GO:0071013 GO:GO:0097157 PANTHER:PTHR10887:SF5
GeneTree:ENSGT00700000104467 RefSeq:NP_996198.2 UniGene:Dm.10009
ProteinModelPortal:Q7KSN8 SMR:Q7KSN8 PaxDb:Q7KSN8
EnsemblMetazoa:FBtr0301042 GeneID:41437 KEGG:dme:Dmel_CG31368
UCSC:CG31368-RB FlyBase:FBgn0051368 InParanoid:Q7KSN8
OrthoDB:EOG43XSJ9 PhylomeDB:Q7KSN8 GenomeRNAi:41437 NextBio:823855
ArrayExpress:Q7KSN8 Bgee:Q7KSN8 Uniprot:Q7KSN8
Length = 1486
Score = 196 (74.1 bits), Expect = 7.4e-11, P = 7.4e-11
Identities = 75/258 (29%), Positives = 133/258 (51%)
Query: 7 VVIDEAAQLKESESAIPLQL--PC-----IQHAILVGDEVQLPAMVESSVSGEAYFG--R 57
++++E+AQ+ E E+ IPL L P ++ I++GD QLP ++++ ++ + Y +
Sbjct: 1075 ILMEESAQILEIETFIPLLLQNPLDGLNRLKRWIMIGDHHQLPPVIKN-MAFQKYSNMEQ 1133
Query: 58 SLFERLSYLGHPKHLLSMQYRMHPSI-SFFPNSYFYENKIRDAPTVRKRSYEKRFLPGPM 116
SLF RL LG P L Q R SI S + Y K+ D + +R K+ PG +
Sbjct: 1134 SLFTRLVRLGVPTVDLDGQGRARASICSLYKWRY---KKLEDLQHIFERDEYKQANPGFV 1190
Query: 117 YGPYSFINV--F-G-GREEFIEHSCRNMVEVSVVMKILRNLYKAWVESKEKLSIGIVSPY 172
+ Y INV F G G E + +N+ E ++ + +Y + I I++ Y
Sbjct: 1191 HD-YQLINVEDFKGVGESEPNPYFYQNLAEAEYIVAVY--MYMRLL-GYPAAKISILTTY 1246
Query: 173 SAQVIAIQEKLGSKY--EKIAGFAVKVKSIDGFQGGEEDIIIISTVRSNNTGSIGFASTP 230
+ Q I++ + ++ + G+ K+ ++D +QG + D I+IS VR T ++G
Sbjct: 1247 NGQKHLIRDVINARCGNNPLIGWPHKITTVDKYQGQQNDYILISLVR---TKAVGHLRDV 1303
Query: 231 QRINVALTRARHCLWILG 248
+R+ VA++RAR L++ G
Sbjct: 1304 RRLVVAMSRARLGLYVFG 1321
>ZFIN|ZDB-GENE-061013-333 [details] [associations]
symbol:zgc:154086 "zgc:154086" species:7955 "Danio
rerio" [GO:0005575 "cellular_component" evidence=ND]
ZFIN:ZDB-GENE-061013-333 InterPro:IPR012340 SUPFAM:SSF50249
InterPro:IPR014001 PROSITE:PS51192 InterPro:IPR025223 Pfam:PF14444
HOVERGEN:HBG052382 KO:K13983 InterPro:IPR026125
PANTHER:PTHR10887:SF6 HOGENOM:HOG000015363 EMBL:BC124807
IPI:IPI00611882 RefSeq:NP_001070795.1 UniGene:Dr.40096
ProteinModelPortal:Q08BA5 GeneID:768184 KEGG:dre:768184
NextBio:20918499 Uniprot:Q08BA5
Length = 1106
Score = 190 (71.9 bits), Expect = 2.2e-10, P = 2.2e-10
Identities = 79/267 (29%), Positives = 120/267 (44%)
Query: 33 ILVGDEVQLPAMVESSVSGEAYFGRSLFERLS----YL-G----HPKHLLSM--QYRMHP 81
+L GD QL +V+S ++ G SL ERL Y G +P + + YR H
Sbjct: 839 VLAGDPKQLGPVVKSRLASVFGLGVSLLERLMGNSLYACGERGFNPLLVTKLLYNYRSHE 898
Query: 82 SISFFPNSYFYENKIRDAPTVRKRSYEK--RFLPGPMYG-PYSFINVFGGR-EEFIEHSC 137
++ P+ FY ++ ++ + + + P G P F V G E S
Sbjct: 899 ALLDLPSRLFYAGEL--CVRAQRAAVDSLCHWNKLPTRGFPLIFHGVRGSEMREGCNPSW 956
Query: 138 RNMVEVSVVMKILRNLYKAWVESKEKLSIGIVSPYSAQVIAIQEKLGSKYEKIAGFAVKV 197
N E VM L K IG+++PY QV EK+ +++ VKV
Sbjct: 957 FNPAEAVQVMMYCCQLAKRLYNPISAADIGVIAPYRKQV----EKIRVLLQRVGLGEVKV 1012
Query: 198 KSIDGFQGGEEDIIIISTVRSNNT-------GSIGFASTPQRINVALTRARHCLWILGSE 250
S++ FQG E I+I+STVRSN + +GF S P+R NVA+TRA+ L ++G+
Sbjct: 1013 GSVEEFQGQEFLIMILSTVRSNESLLNEELQCMLGFLSNPKRFNVAITRAKALLIVIGNP 1072
Query: 251 RTLNHSESVWESLLDDAKARQCFFNID 277
L E + +LL + + F D
Sbjct: 1073 HVLI-KEPCFSALLQYSYDNRAFIGCD 1098
Score = 167 (63.8 bits), Expect = 6.5e-08, P = 6.5e-08
Identities = 71/232 (30%), Positives = 103/232 (44%)
Query: 7 VVIDEAAQLKESESAIPLQL--PCIQHAILVGDEVQLPAMVESSVSGEAYFGRSLFERLS 64
V +DEA Q E E+ IPL L +L GD QL +V+S ++ G SL ERL
Sbjct: 811 VFVDEAGQATEPETLIPLSLLSETSGQIVLAGDPKQLGPVVKSRLASVFGLGVSLLERLM 870
Query: 65 ----YL-G----HPKHLLSM--QYRMHPSISFFPNSYFYENKIRDAPTVRKRSYEK--RF 111
Y G +P + + YR H ++ P+ FY ++ ++ + + +
Sbjct: 871 GNSLYACGERGFNPLLVTKLLYNYRSHEALLDLPSRLFYAGEL--CVRAQRAAVDSLCHW 928
Query: 112 LPGPMYG-PYSFINVFGGR-EEFIEHSCRNMVEVSVVMKILRNLYKAWVESKEKLSIGIV 169
P G P F V G E S N E VM L K IG++
Sbjct: 929 NKLPTRGFPLIFHGVRGSEMREGCNPSWFNPAEAVQVMMYCCQLAKRLYNPISAADIGVI 988
Query: 170 SPYSAQVIAIQEKLGSKYEKIAGFAVKVKSIDGFQGGEEDIIIISTVRSNNT 221
+PY QV EK+ +++ VKV S++ FQG E I+I+STVRSN +
Sbjct: 989 APYRKQV----EKIRVLLQRVGLGEVKVGSVEEFQGQEFLIMILSTVRSNES 1036
>WB|WBGene00001258 [details] [associations]
symbol:emb-4 species:6239 "Caenorhabditis elegans"
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IEA]
[GO:0005681 "spliceosomal complex" evidence=IEA] [GO:0097157
"pre-mRNA intronic binding" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0010171 "body morphogenesis" evidence=IMP] [GO:0040011
"locomotion" evidence=IMP] [GO:0040010 "positive regulation of
growth rate" evidence=IMP] InterPro:IPR024860 InterPro:IPR026300
PIRSF:PIRSF038901 GO:GO:0009792 GO:GO:0040010 GO:GO:0010171
GO:GO:0040011 GO:GO:0005681 GO:GO:0000398 eggNOG:COG1112
HOGENOM:HOG000170551 KO:K12874 OMA:RTKAVGH GO:GO:0097157
PANTHER:PTHR10887:SF5 GeneTree:ENSGT00700000104467 EMBL:AL132853
GeneID:180232 KEGG:cel:CELE_Y80D3A.2 CTD:180232
RefSeq:NP_001256831.1 ProteinModelPortal:Q9U1Q7 SMR:Q9U1Q7
PaxDb:Q9U1Q7 PRIDE:Q9U1Q7 EnsemblMetazoa:Y80D3A.2a.1
EnsemblMetazoa:Y80D3A.2a.2 UCSC:Y80D3A.2.1 WormBase:Y80D3A.2a
InParanoid:Q9U1Q7 NextBio:908508 ArrayExpress:Q9U1Q7 Uniprot:Q9U1Q7
Length = 1467
Score = 189 (71.6 bits), Expect = 4.1e-10, P = 4.1e-10
Identities = 76/259 (29%), Positives = 125/259 (48%)
Query: 7 VVIDEAAQLKESESAIPLQL--PCIQHA-----ILVGDEVQLPAMVESSVSGE-AYFGRS 58
+V++EAAQ+ E E+ IPL L P H I++GD QLP +V++ + + +S
Sbjct: 1061 IVMEEAAQILEVETFIPLLLQNPQDGHNRLKRWIMIGDHHQLPPVVQNQAFQKYSNMEQS 1120
Query: 59 LFERLSYLGHPKHLLSMQYRMHPSISFFPNSYFYENKIRDAPTVRKRSYEKRFLPGPMYG 118
LF RL L P L Q R I+ + Y N + + P V + G +
Sbjct: 1121 LFARLVRLSVPNVQLDRQGRARAQIAEL-YQWRY-NGLGNLPHVDGLPQFQNANAGFAF- 1177
Query: 119 PYSFINV--FGGREEF--IEHSCRNMVEVSVVMKILRNLYKAWVESKEKLSIGIVSPYSA 174
P+ FI++ F G E H +N+ E + + + EK+SI ++ Y+
Sbjct: 1178 PFQFIDIPDFNGHGETQPSPHFYQNLGEAEYACALYTYM-RILGYPAEKISI--LTTYNG 1234
Query: 175 QVIAIQEKLGSKYEK--IAGFAVKVKSIDGFQGGEEDIIIISTVRSNNTGSIGFASTPQR 232
Q I++ + + + G KV ++D +QG + D II+S V++ N G I +R
Sbjct: 1235 QAQLIRDVFQRRCDTNPLIGMPAKVSTVDKYQGQQNDFIILSLVKTRNIGHI---RDVRR 1291
Query: 233 INVALTRARHCLWILGSER 251
+ VAL+RAR L++LG +
Sbjct: 1292 LVVALSRARLGLYVLGRSK 1310
>FB|FBgn0041164 [details] [associations]
symbol:armi "armitage" species:7227 "Drosophila melanogaster"
[GO:0000184 "nuclear-transcribed mRNA catabolic process,
nonsense-mediated decay" evidence=ISS;IMP] [GO:0007319 "negative
regulation of oskar mRNA translation" evidence=IMP] [GO:0000578
"embryonic axis specification" evidence=NAS;IMP] [GO:0016325
"oocyte microtubule cytoskeleton organization" evidence=IMP]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0007317 "regulation of
pole plasm oskar mRNA localization" evidence=IMP] [GO:0016246 "RNA
interference" evidence=IMP] [GO:0003678 "DNA helicase activity"
evidence=NAS] [GO:0030425 "dendrite" evidence=IDA] [GO:0043025
"neuronal cell body" evidence=IDA] [GO:0007616 "long-term memory"
evidence=IMP] [GO:0030424 "axon" evidence=IDA] [GO:0045202
"synapse" evidence=IDA] [GO:0031023 "microtubule organizing center
organization" evidence=IMP] [GO:0046843 "dorsal appendage
formation" evidence=IMP] [GO:0007318 "pole plasm protein
localization" evidence=IMP] [GO:0070725 "Yb body" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] GO:GO:0005524
GO:GO:0005737 EMBL:AE014296 GO:GO:0016246 GO:GO:0000184
GO:GO:0030424 GO:GO:0043025 GO:GO:0030425 GO:GO:0007616
GO:GO:0045202 GO:GO:0007318 eggNOG:COG1112 EMBL:AY598469
RefSeq:NP_001014556.1 RefSeq:NP_647816.2 ProteinModelPortal:Q6J5K9
SMR:Q6J5K9 IntAct:Q6J5K9 STRING:Q6J5K9 PaxDb:Q6J5K9 GeneID:38427
KEGG:dme:Dmel_CG11513 UCSC:CG11513-RA CTD:38427 FlyBase:FBgn0041164
InParanoid:Q6J5K9 OMA:ITISTCT OrthoDB:EOG4DZ094 PhylomeDB:Q6J5K9
GenomeRNAi:38427 NextBio:808602 Bgee:Q6J5K9 GermOnline:CG11513
GO:GO:0070725 GO:GO:0003678 GO:GO:0046843 GO:GO:0031023
InterPro:IPR026122 PANTHER:PTHR10887:SF17 Uniprot:Q6J5K9
Length = 1274
Score = 164 (62.8 bits), Expect = 6.9e-10, Sum P(2) = 6.9e-10
Identities = 70/226 (30%), Positives = 102/226 (45%)
Query: 73 LSMQYRMHPSISFFPNSYFYENKIRDAPTV-RKRSYEKRFLPG-----------PM-YGP 119
L YR PSI + FY++++ P + K S E R L P +G
Sbjct: 1030 LLYNYRALPSIMSIYSRLFYDDEL--IPVLSEKDSRESRLLSKLRCVFESEKDIPQAHGT 1087
Query: 120 YSFINVFG-GREEFIEHSCRNMVEVSVVMKILRNLYKAWVESKEKLSIGIVSPYSAQVIA 178
+ F + G R+ S N EV V + LY+A V + + IGI++PY QV
Sbjct: 1088 F-FYGIIGENRQNNDSPSWFNPQEVREVFLMTIALYRANVTADQ---IGIITPYQKQV-- 1141
Query: 179 IQEKLGSKYEKIAGFAVKVKSIDGFQGGEEDIIIISTVRSNNT-------GSIGFASTPQ 231
+ L S + K+ S++ FQG E DII+ISTVRS+ S+GF +
Sbjct: 1142 --KMLRSMFIGTDVVMPKIGSVEEFQGQERDIILISTVRSSEEILRMDARFSLGFVRCSK 1199
Query: 232 RINVALTRARHCLWILGSERTLNHSESVWESLLDDAKARQCFFNID 277
R+NVA++RAR + I G+ L E W L+ +F D
Sbjct: 1200 RLNVAVSRARAMMIIFGNPHLLAVDEC-WRQLILFCVKNNAYFGCD 1244
Score = 79 (32.9 bits), Expect = 6.9e-10, Sum P(2) = 6.9e-10
Identities = 20/59 (33%), Positives = 33/59 (55%)
Query: 7 VVIDEAAQLKESESAIPLQLPCIQHA--ILVGDEVQLPAMVESSVSGEAYFGRSLFERL 63
V+ DEA Q E E+ +P+ + + + +L GD QL ++V S ++ + F S ERL
Sbjct: 945 VLFDEAGQCTEPETMVPIVMLTKKRSQVVLSGDPRQLQSIVTSRIASKMGFSISFLERL 1003
Score = 38 (18.4 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 10/37 (27%), Positives = 17/37 (45%)
Query: 17 ESESAIPLQLPCIQHAILVGDEVQLPAMVESSVSGEA 53
+SES + + P I G E+ + + + GEA
Sbjct: 455 DSESQLSVVSPLESKEISSGSEITVTFEIHTQFLGEA 491
>ZFIN|ZDB-GENE-040426-2419 [details] [associations]
symbol:helz "helicase with zinc finger"
species:7955 "Danio rerio" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
InterPro:IPR011539 InterPro:IPR000571 Pfam:PF00642 PROSITE:PS50103
SMART:SM00356 ZFIN:ZDB-GENE-040426-2419 GO:GO:0005524 GO:GO:0005634
GO:GO:0046872 GO:GO:0008270 GO:GO:0003700 GO:GO:0003676
GO:GO:0004386 eggNOG:COG1112 EMBL:BC066461 IPI:IPI00500029
RefSeq:NP_998431.1 UniGene:Dr.35354 ProteinModelPortal:Q6NYU2
GeneID:406550 KEGG:dre:406550 CTD:9931 HOGENOM:HOG000231202
HOVERGEN:HBG031603 OrthoDB:EOG4NP72K NextBio:20818112
ArrayExpress:Q6NYU2 Uniprot:Q6NYU2
Length = 1860
Score = 195 (73.7 bits), Expect = 9.1e-10, Sum P(2) = 9.1e-10
Identities = 71/225 (31%), Positives = 110/225 (48%)
Query: 7 VVIDEAAQLKESESAIPLQLPCIQ-HAILVGDEVQLPAMVESSVSGEAYFGRSLFERLSY 65
+++DEAAQ E E+ +PL L +L GD +QL V S + E SL +RL Y
Sbjct: 784 ILLDEAAQAMECETIMPLALAVKSTRVVLAGDHMQLSPFVYSEFARERNLHVSLLDRL-Y 842
Query: 66 LGHPKH-----LLSMQYRMHPSISFFPNSYFYENKIRDAPTVRKRSYEKRFLPGPMYGPY 120
+P LL YR H +I + + FYE K+ + K+ K F Y P
Sbjct: 843 EHYPSEYPCRILLCENYRSHEAIINYTSDLFYEGKLMASG---KQPPHKDF-----Y-PL 893
Query: 121 SFINVFGGR-EEFIEHSCRNMVEVSVVMKILRNLYKAWVESKEKL---SIGIVSPYSAQV 176
+F G +E + N EV +++ + + K W S KL SIG+VSPY+ QV
Sbjct: 894 TFFTARGEDVQEKNSTAYYNNAEVFEIVERVEEMRKKWPVSWGKLEEGSIGVVSPYADQV 953
Query: 177 IAIQEKLGSKYEKIAGFAVKVKSIDGFQGGEEDIIIISTVRSNNT 221
I+ +L K +++ V V+ + QG + ++ +STVR+ +T
Sbjct: 954 FRIRAELRKK--RMS--EVSVERVLNVQGKQFRVLFLSTVRTRHT 994
Score = 50 (22.7 bits), Expect = 9.1e-10, Sum P(2) = 9.1e-10
Identities = 12/43 (27%), Positives = 21/43 (48%)
Query: 225 GFASTPQRINVALTRARHCLWILGSERTL---NHSESVWESLL 264
GF S + +N A+TRA+ + ++G L WE+ +
Sbjct: 1019 GFLSNYKLLNTAITRAQSLVAVVGDPIALCSVGRCRKFWETFI 1061
>TAIR|locus:2064158 [details] [associations]
symbol:EMB2765 "EMBRYO DEFECTIVE 2765" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0009507 "chloroplast" evidence=IDA] [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0005829 "cytosol" evidence=RCA]
InterPro:IPR024860 InterPro:IPR026300 PIRSF:PIRSF038901
GO:GO:0005886 GO:GO:0009507 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0005681 GO:GO:0000398 eggNOG:COG1112 HOGENOM:HOG000170551
KO:K12874 OMA:RTKAVGH GO:GO:0097157 PANTHER:PTHR10887:SF5
EMBL:AY099864 IPI:IPI00544394 RefSeq:NP_850297.1 UniGene:At.23967
ProteinModelPortal:Q8L5Y4 SMR:Q8L5Y4 STRING:Q8L5Y4 PaxDb:Q8L5Y4
PRIDE:Q8L5Y4 EnsemblPlants:AT2G38770.1 GeneID:818459
KEGG:ath:AT2G38770 TAIR:At2g38770 InParanoid:Q8L5Y4
PhylomeDB:Q8L5Y4 ProtClustDB:CLSN2680117 Genevestigator:Q8L5Y4
Uniprot:Q8L5Y4
Length = 1509
Score = 183 (69.5 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 74/255 (29%), Positives = 128/255 (50%)
Query: 7 VVIDEAAQLKESESAIPLQLPCIQ--HA-----ILVGDEVQLPAMVESSVSGE-AYFGRS 58
++++E+AQ+ E E+ IP+ L + HA IL+GD QLP +V++ + ++ +S
Sbjct: 1120 LLMEESAQILEIETFIPMLLQRQEDGHARLKRCILIGDHHQLPPVVKNMAFQKYSHMDQS 1179
Query: 59 LFERLSYLGHPKHLLSMQYRMHPSISFFPNSYFYENKIRDAPTVRKRSYEKRFLPGPMYG 118
LF R LG P L+ Q R PS++ N + Y + + D V++ +R G Y
Sbjct: 1180 LFTRFVRLGIPYIELNAQGRARPSLAKLYN-WRYRD-LGDLSIVKEAPIFQRANAGFSY- 1236
Query: 119 PYSFINV--FGGREEFIEHSC--RNMVEVSVVMKILRNLYKAWVESKEKLSIGIVSPYSA 174
Y +NV + GR E +N E ++ + +Y + I I++ Y+
Sbjct: 1237 EYQLVNVPDYEGRGESTPSPWFYQNQGEAEYIVSVY--IYMRLLGYPAN-KISILTTYNG 1293
Query: 175 QVIAIQEKLGSK---YEKIAGFAVKVKSIDGFQGGEEDIIIISTVRSNNTGSIGFASTPQ 231
Q + I++ + + Y I G KV ++D FQG + D I++S VR T +G +
Sbjct: 1294 QKLLIRDVINRRCVPYPFI-GPPSKVTTVDKFQGQQNDFILLSLVR---TRFVGHLRDVR 1349
Query: 232 RINVALTRARHCLWI 246
R+ VA++RAR L++
Sbjct: 1350 RLVVAMSRARLGLYV 1364
>UNIPROTKB|Q8QHA5 [details] [associations]
symbol:dna2 "DNA replication ATP-dependent
helicase/nuclease DNA2" species:8355 "Xenopus laevis" [GO:0000076
"DNA replication checkpoint" evidence=ISS] [GO:0000729 "DNA
double-strand break processing" evidence=ISS] [GO:0003677 "DNA
binding" evidence=ISS] [GO:0003678 "DNA helicase activity"
evidence=ISS] [GO:0004518 "nuclease activity" evidence=ISS]
[GO:0006260 "DNA replication" evidence=ISS] [GO:0006264
"mitochondrial DNA replication" evidence=ISS] [GO:0006284
"base-excision repair" evidence=ISS] [GO:0016890 "site-specific
endodeoxyribonuclease activity, specific for altered base"
evidence=ISS] [GO:0017108 "5'-flap endonuclease activity"
evidence=ISS] [GO:0032508 "DNA duplex unwinding" evidence=ISS]
[GO:0033567 "DNA replication, Okazaki fragment processing"
evidence=ISS] [GO:0043137 "DNA replication, removal of RNA primer"
evidence=ISS] [GO:0043139 "5'-3' DNA helicase activity"
evidence=ISS] [GO:0043142 "single-stranded DNA-dependent ATPase
activity" evidence=ISS] [GO:0045740 "positive regulation of DNA
replication" evidence=ISS] [GO:0005760 "gamma DNA polymerase
complex" evidence=ISS] InterPro:IPR026851 InterPro:IPR014808
Pfam:PF08696 GO:GO:0005739 GO:GO:0005524 GO:GO:0005634
GO:GO:0046872 GO:GO:0006284 GO:GO:0003677 GO:GO:0051539
GO:GO:0016890 GO:GO:0045740 GO:GO:0000729 GO:GO:0017108
GO:GO:0000076 GO:GO:0043137 GO:GO:0043139 GO:GO:0043142
GO:GO:0006264 PANTHER:PTHR10887:SF14 CTD:1763 HOVERGEN:HBG081456
KO:K10742 EMBL:AF474372 RefSeq:NP_001079231.1 UniGene:Xl.17390
ProteinModelPortal:Q8QHA5 GeneID:378492 KEGG:xla:378492
Xenbase:XB-GENE-5829000 Uniprot:Q8QHA5
Length = 1053
Score = 181 (68.8 bits), Expect = 1.9e-09, P = 1.9e-09
Identities = 45/141 (31%), Positives = 79/141 (56%)
Query: 139 NMVEVSVVMKILRNLYKAWVESKEKLSIGIVSPYSAQVIAIQEKLGSKYEKIAGFAVKVK 198
N +E +V + + KA + IGI++PY Q+ + + + + ++ AV+V
Sbjct: 913 NWIEAKLVFHLTKLYLKAGCRPSD---IGIIAPYRQQL----KMISNYFNSLSASAVEVN 965
Query: 199 SIDGFQGGEEDIIIISTVRSNNTGSIG-FASTPQRINVALTRARHCLWILGSERTLNHSE 257
++D +QG ++ +II+S VRSN G +G +R+NVALTRA+H L +LG TLN +
Sbjct: 966 TVDKYQGRDKSVIIVSFVRSNIDGKLGDLLKDWRRLNVALTRAKHKLIMLGCVPTLNRFD 1025
Query: 258 SVWESLLDDAKARQCFFNIDE 278
+ E L+ + K +++ E
Sbjct: 1026 CL-EQLICNLKTENQIYDLPE 1045
Score = 158 (60.7 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 67/239 (28%), Positives = 113/239 (47%)
Query: 6 FVVIDEAAQLKESESAIPLQLPCIQHAILVGDEVQLPAMVESSVSGEAYFGRSLFERLSY 65
F ++DEA+Q+ + PL +LVGD QLP +V+S+ + E SLF+RL
Sbjct: 759 FCIVDEASQISQPICLGPLFFA--DRFVLVGDHQQLPPLVKSAEARELGMSESLFKRLER 816
Query: 66 LGHPKHLLSMQYRMHPSISFFPNSYFYENKI-----RDAPTVRKRSYEKRFLPGPMYGPY 120
L++QYRM+ I N YE ++ R + V + + K L +
Sbjct: 817 NQEAVVQLTVQYRMNSKIMALSNKLVYEGRLECASDRVSNAVVQLPHIKTLLLELEFRE- 875
Query: 121 SFINVFGGREEFIEHS---C-RNMVEVSVVMKILRNLYKAWVESK-----EKLSIGI-VS 170
S +++ ++ +E S C N ++ + + W+E+K KL +
Sbjct: 876 SQESMW--IKDVLEPSNPVCFLNTEKIPALETEEKGGISNWIEAKLVFHLTKLYLKAGCR 933
Query: 171 PYSAQVIAI---QEKLGSKY-EKIAGFAVKVKSIDGFQGGEEDIIIISTVRSNNTGSIG 225
P +IA Q K+ S Y ++ AV+V ++D +QG ++ +II+S VRSN G +G
Sbjct: 934 PSDIGIIAPYRQQLKMISNYFNSLSASAVEVNTVDKYQGRDKSVIIVSFVRSNIDGKLG 992
Score = 42 (19.8 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 14/44 (31%), Positives = 22/44 (50%)
Query: 758 KEQALLDSTLPASFPSFN-EAKHNVLCPELKQLYVAITRTRQRL 800
K Q S + SF N + K L + ++L VA+TR + +L
Sbjct: 969 KYQGRDKSVIIVSFVRSNIDGKLGDLLKDWRRLNVALTRAKHKL 1012
>UNIPROTKB|I6L9H4 [details] [associations]
symbol:HELZ "Probable helicase with zinc finger domain"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR000571 Pfam:PF00642 PROSITE:PS50103 SMART:SM00356
GO:GO:0008270 GO:GO:0003676 EMBL:AC005544 EMBL:AC007448
UniGene:Hs.370140 UniGene:Hs.569824 HGNC:HGNC:16878 ChiTaRS:HELZ
EMBL:BC094881 ProteinModelPortal:I6L9H4 Ensembl:ENST00000579953
Uniprot:I6L9H4
Length = 1163
Score = 189 (71.6 bits), Expect = 2.0e-09, Sum P(2) = 2.0e-09
Identities = 70/225 (31%), Positives = 110/225 (48%)
Query: 7 VVIDEAAQLKESESAIPLQLPCIQ-HAILVGDEVQLPAMVESSVSGEAYFGRSLFERLSY 65
+++DEAAQ E E+ +PL L +L GD +QL V S + E SL +RL Y
Sbjct: 792 ILLDEAAQAMECETIMPLALATQNTRIVLAGDHMQLSPFVYSEFARERNLHVSLLDRL-Y 850
Query: 66 LGHPKH-----LLSMQYRMHPSISFFPNSYFYENKIRDAPTVRKRSYEKRFLPGPMYGPY 120
+P LL YR H +I + + FYE K+ + K+ K F Y P
Sbjct: 851 EHYPAEFPCRILLCENYRSHEAIINYTSELFYEGKLMASG---KQPAHKDF-----Y-PL 901
Query: 121 SFINVFGGR-EEFIEHSCRNMVEVSVVMKILRNLYKAWVESKEKL---SIGIVSPYSAQV 176
+F G +E + N EV V++ + L + W + KL SIG+V+PY+ QV
Sbjct: 902 TFFTARGEDVQEKNSTAFYNNAEVFEVVERVEELRRKWPVAWGKLDDGSIGVVTPYADQV 961
Query: 177 IAIQEKLGSKYEKIAGFAVKVKSIDGFQGGEEDIIIISTVRSNNT 221
I+ +L K +++ V V+ + QG + ++ +STVR+ +T
Sbjct: 962 FRIRAELRKK--RLSD--VNVERVLNVQGKQFRVLFLSTVRTRHT 1002
Score = 48 (22.0 bits), Expect = 2.0e-09, Sum P(2) = 2.0e-09
Identities = 12/43 (27%), Positives = 20/43 (46%)
Query: 225 GFASTPQRINVALTRARHCLWILGSERTL---NHSESVWESLL 264
GF S + +N A+TRA+ + ++G L WE +
Sbjct: 1027 GFLSNYKLLNTAITRAQSLVAVVGDPIALCSIGRCRKFWERFI 1069
Score = 43 (20.2 bits), Expect = 6.7e-09, Sum P(2) = 6.7e-09
Identities = 8/17 (47%), Positives = 12/17 (70%)
Query: 1687 IGNPLVLVSLGDNCPKF 1703
+G+P+ L S+G C KF
Sbjct: 1049 VGDPIALCSIG-RCRKF 1064
>UNIPROTKB|F6QXW0 [details] [associations]
symbol:dna2 "DNA replication ATP-dependent
helicase/nuclease DNA2" species:8364 "Xenopus (Silurana)
tropicalis" [GO:0000076 "DNA replication checkpoint" evidence=ISS]
[GO:0000729 "DNA double-strand break processing" evidence=ISS]
[GO:0003677 "DNA binding" evidence=ISS] [GO:0003678 "DNA helicase
activity" evidence=ISS] [GO:0004518 "nuclease activity"
evidence=ISS] [GO:0006260 "DNA replication" evidence=ISS]
[GO:0017108 "5'-flap endonuclease activity" evidence=ISS]
[GO:0032508 "DNA duplex unwinding" evidence=ISS] [GO:0033567 "DNA
replication, Okazaki fragment processing" evidence=ISS] [GO:0043139
"5'-3' DNA helicase activity" evidence=ISS] [GO:0043142
"single-stranded DNA-dependent ATPase activity" evidence=ISS]
InterPro:IPR026851 InterPro:IPR014808 Pfam:PF08696 GO:GO:0005739
GO:GO:0005524 GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
GO:GO:0051539 GO:GO:0000729 GO:GO:0017108 GO:GO:0000076
GO:GO:0043139 GO:GO:0043142 GO:GO:0033567 PANTHER:PTHR10887:SF14
GeneTree:ENSGT00550000074852 OMA:EHESLCH EMBL:AAMC01051984
EMBL:AAMC01051985 EMBL:AAMC01051986 Ensembl:ENSXETT00000016310
Uniprot:F6QXW0
Length = 1048
Score = 180 (68.4 bits), Expect = 2.5e-09, P = 2.5e-09
Identities = 69/253 (27%), Positives = 115/253 (45%)
Query: 48 SVSGEAYFGRSLFERLSYLGHPKHLLSMQYRMHPSISFFPNSYFYENKIRDA-------- 99
S+ E SLF+RL L++QYRM+ I N YE ++ A
Sbjct: 794 SLVRELGMSESLFKRLERNQEAVVQLTVQYRMNSQIMALSNKLVYEGRLECASDRVSNAV 853
Query: 100 ---PTVR--------KRSYEKRFLPGPMY--GPYSFINV--FGGREEFIEHSCRNMVEVS 144
P ++ + S E ++ + P F+N E + N +E
Sbjct: 854 VKLPHIKTLLLELEFRESQESMWIKDVLEPSNPVCFLNTEKIPALETEEKGGISNWIEAK 913
Query: 145 VVMKILRNLYKAWVESKEKLSIGIVSPYSAQVIAIQEKLGSKYEKIAGFAVKVKSIDGFQ 204
+V + + KA + IGI++PY Q+ I S ++ AV+V ++D +Q
Sbjct: 914 LVFCLTKLFLKAGCRPSD---IGIIAPYRQQLKVISNYFNS----LSASAVEVNTVDKYQ 966
Query: 205 GGEEDIIIISTVRSNNTGSIG-FASTPQRINVALTRARHCLWILGSERTLNHSESVWESL 263
G ++ +II+S VRSN G +G +R+NVALTRA+H L +LG TL+ + E L
Sbjct: 967 GRDKSVIIVSFVRSNIDGKLGDLLKDWRRLNVALTRAKHKLIMLGCVPTLSRFLCL-EQL 1025
Query: 264 LDDAKARQCFFNI 276
+ K++ +++
Sbjct: 1026 ICHLKSKNHIYDL 1038
>UNIPROTKB|I3LBB7 [details] [associations]
symbol:I3LBB7 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043142 "single-stranded DNA-dependent ATPase activity"
evidence=IEA] [GO:0033567 "DNA replication, Okazaki fragment
processing" evidence=IEA] [GO:0017108 "5'-flap endonuclease
activity" evidence=IEA] InterPro:IPR026851 GO:GO:0017108
GO:GO:0043142 GO:GO:0033567 PANTHER:PTHR10887:SF14
GeneTree:ENSGT00550000074852 EMBL:CU468421
Ensembl:ENSSSCT00000030264 OMA:STCHITH Uniprot:I3LBB7
Length = 249
Score = 113 (44.8 bits), Expect = 2.6e-09, Sum P(2) = 2.6e-09
Identities = 30/91 (32%), Positives = 46/91 (50%)
Query: 6 FVVIDEAAQLKESESAIPLQLPCIQHAILVGDEVQLPAMVESSVSGEAYFGRSLFERLSY 65
F ++DEA+Q+ + PL + +LVGD QLP +V + + SLF+RL
Sbjct: 15 FCIVDEASQISQPICLGPLFFS--RRFVLVGDHQQLPPLVLNREARALGMSESLFKRLEQ 72
Query: 66 LGHPKHLLSMQYRMHPSISFFPNSYFYENKI 96
+ L++QYRM+ I N YE K+
Sbjct: 73 NKNAVVQLTVQYRMNSKIMSLSNKLTYEGKL 103
Score = 105 (42.0 bits), Expect = 2.6e-09, Sum P(2) = 2.6e-09
Identities = 31/108 (28%), Positives = 53/108 (49%)
Query: 119 PYSFINV--FGGREEFIEHSCRNMVEVSVVMKILRNLYKAWVESKEKLSIGIVSPYSAQV 176
P F+N E+ + N+ E +V+ + KA +IGI++PY Q+
Sbjct: 148 PVCFLNTDKVPAPEQVEKGGVSNITEAKLVVYLTSIFVKAGCNP---CNIGIIAPYRQQL 204
Query: 177 IAIQEKLGSKYEKIAGFAVKVKSIDGFQGGEEDIIIISTVRSNNTGSI 224
I + L G V+V ++D +QG ++ II++S VRSN G++
Sbjct: 205 KVINDLLS---HSSVGM-VEVNTVDKYQGRDKSIILVSFVRSNRDGTV 248
>WB|WBGene00016566 [details] [associations]
symbol:eri-7 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0019079 "viral
genome replication" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0000003 "reproduction" evidence=IMP]
InterPro:IPR003593 SMART:SM00382 GO:GO:0000166 GO:GO:0000003
GO:GO:0017111 InterPro:IPR014001 SMART:SM00487 EMBL:FO080509
GeneTree:ENSGT00700000104572 PIR:T28788 RefSeq:NP_491374.2
ProteinModelPortal:O01976 SMR:O01976 EnsemblMetazoa:C41D11.7
GeneID:172047 KEGG:cel:CELE_C41D11.7 UCSC:C41D11.7.1 CTD:172047
WormBase:C41D11.7 InParanoid:O01976 OMA:NDEEMIN NextBio:873807
ArrayExpress:O01976 Uniprot:O01976
Length = 625
Score = 138 (53.6 bits), Expect = 3.1e-09, Sum P(3) = 3.1e-09
Identities = 40/143 (27%), Positives = 70/143 (48%)
Query: 136 SCRNMVEVSVVMKILRNLYKAWVESKEKLSIGIVSPYSAQ---VIAIQEKLGSKYEKIAG 192
S N+ E + + + L K V+ + I I++PY Q V + E+ G++
Sbjct: 389 SYANLAEAKIAIGHYQRLLKYGVQPSD---IAIITPYKGQTSLVTKLMEEFGAETGYTDF 445
Query: 193 FAVKVKSIDGFQGGEEDIIIISTVRSNNTGSIGFASTPQRINVALTRARHCLWILGSERT 252
+ ++D QG E +++I + VRSN ++GF S +R+NV +TRA+ +G+
Sbjct: 446 VQTTIGTVDSVQGKEYEVVIFTMVRSNPRKTMGFVSELRRLNVVITRAKRHFMFIGNGYL 505
Query: 253 LNHSESVWESLLDDAKARQCFFN 275
L +ES + + K CF N
Sbjct: 506 L--AESKKDEI---RKLYDCFKN 523
Score = 100 (40.3 bits), Expect = 3.1e-09, Sum P(3) = 3.1e-09
Identities = 33/121 (27%), Positives = 60/121 (49%)
Query: 8 VIDEAAQLKESESAIPLQLPCIQHAILVGDEVQLPAMVESSVSGEAYFGRSLFERLSYLG 67
+IDEAAQ+ E+++ P ++ ++ GD QLPA+V + + S+ +R+
Sbjct: 236 IIDEAAQVMEAQTW-PAVYK-MKRIVMAGDPKQLPALVFTDEAKAFGLQNSVMDRILEKK 293
Query: 68 HPKH--LLSMQYRMHPSISFFPNSYFYENKIRDAPTVRKRSYEKRFLPGPMYGPYSFINV 125
+ +L QYR + I+ + N+ FY N+++ V+ Y + P P F N+
Sbjct: 294 NNFSWIMLENQYRSNAKIATWSNTCFYHNQLKT--DVKCHEYSLHTILNPQ--PKKFRNL 349
Query: 126 F 126
F
Sbjct: 350 F 350
Score = 39 (18.8 bits), Expect = 3.1e-09, Sum P(3) = 3.1e-09
Identities = 8/24 (33%), Positives = 13/24 (54%)
Query: 1467 KRLDENSPWKEFFESLSWNMGSES 1490
KR +EN P ++L+W E+
Sbjct: 569 KRFNENGPDYRAKKALAWEKREET 592
>UNIPROTKB|Q9BXT6 [details] [associations]
symbol:MOV10L1 "Putative helicase Mov10l1" species:9606
"Homo sapiens" [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=NAS] [GO:0007283 "spermatogenesis" evidence=IEP]
[GO:0005524 "ATP binding" evidence=TAS] [GO:0000287 "magnesium ion
binding" evidence=TAS] [GO:0003723 "RNA binding" evidence=TAS]
[GO:0007281 "germ cell development" evidence=IEP] [GO:0005622
"intracellular" evidence=IC] GO:GO:0007275 GO:GO:0005524
GO:GO:0000287 GO:GO:0007283 GO:GO:0003723 GO:GO:0005622
GO:GO:0007281 eggNOG:COG1112 GO:GO:0004004 EMBL:AL022328
EMBL:AF285604 EMBL:AK000033 EMBL:AK090740 EMBL:CR456466
EMBL:AL034546 EMBL:BC150137 EMBL:BC152539 EMBL:AL133068
IPI:IPI00005638 IPI:IPI00178391 IPI:IPI00215671 IPI:IPI00853536
PIR:T42668 RefSeq:NP_001157576.1 RefSeq:NP_001157577.1
RefSeq:NP_001157578.1 RefSeq:NP_061868.1 UniGene:Hs.62880
ProteinModelPortal:Q9BXT6 SMR:Q9BXT6 STRING:Q9BXT6
PhosphoSite:Q9BXT6 DMDM:22095856 PaxDb:Q9BXT6 PeptideAtlas:Q9BXT6
PRIDE:Q9BXT6 DNASU:54456 Ensembl:ENST00000262794
Ensembl:ENST00000354853 Ensembl:ENST00000395843
Ensembl:ENST00000395852 Ensembl:ENST00000395858
Ensembl:ENST00000545383 GeneID:54456 KEGG:hsa:54456 UCSC:uc003bjj.3
UCSC:uc003bjl.3 UCSC:uc003bjm.1 CTD:54456 GeneCards:GC22P050528
HGNC:HGNC:7201 HPA:HPA019034 MIM:605794 neXtProt:NX_Q9BXT6
PharmGKB:PA30909 HOVERGEN:HBG052382 InParanoid:Q9BXT6 KO:K13983
OMA:NMSGVTL OrthoDB:EOG49GKFV PhylomeDB:Q9BXT6 GenomeRNAi:54456
NextBio:56697 ArrayExpress:Q9BXT6 Bgee:Q9BXT6 CleanEx:HS_MOV10L1
Genevestigator:Q9BXT6 GermOnline:ENSG00000073146 InterPro:IPR026125
PANTHER:PTHR10887:SF6 Uniprot:Q9BXT6
Length = 1211
Score = 164 (62.8 bits), Expect = 3.2e-09, Sum P(2) = 3.2e-09
Identities = 63/193 (32%), Positives = 90/193 (46%)
Query: 73 LSMQYRMHPSISFFPNSYFYENKIRDA--PTVRKR--SYEKRFLPGPMYGPYSFINVFGG 128
L YR H ++ P+ FY ++ PTV +EK LP + P F V G
Sbjct: 968 LVKNYRSHEALLMLPSRLFYHRELEVCADPTVVTSLLGWEK--LPKKGF-PLIFHGVRGS 1024
Query: 129 R-EEFIEHSCRNMVEVSVVMKILRNLYKAWVESKEKLS-IGIVSPYSAQVIAIQEKLGSK 186
E S N E V++ L + + S+ S IG+++PY QV EK+
Sbjct: 1025 EAREGKSPSWFNPAEAVQVLRYCCLLAHS-ISSQVSASDIGVITPYRKQV----EKIRIL 1079
Query: 187 YEKIAGFAVKVKSIDGFQGGEEDIIIISTVRSNNTGS------IGFASTPQRINVALTRA 240
+ +KV S++ FQG E +IIISTVRSN +GF S +R NVA+TR
Sbjct: 1080 LRNVDLMDIKVGSVEEFQGQEYLVIIISTVRSNEDRFEDDRYFLGFLSNSKRFNVAITRP 1139
Query: 241 RHCLWILGSERTL 253
+ L +LG+ L
Sbjct: 1140 KALLIVLGNPHVL 1152
Score = 72 (30.4 bits), Expect = 3.2e-09, Sum P(2) = 3.2e-09
Identities = 22/59 (37%), Positives = 30/59 (50%)
Query: 7 VVIDEAAQLKESESAIPLQLPC-IQ-HAILVGDEVQLPAMVESSVSGEAYFGRSLFERL 63
V +DEA Q E E IPL L I +L GD +QL +++S ++ S ERL
Sbjct: 883 VFVDEAGQASEPECLIPLGLMSDISGQIVLAGDPMQLGPVIKSRLAMAYGLNVSFLERL 941
>UNIPROTKB|Q81NI5 [details] [associations]
symbol:BAS2982 "Conserved domain protein" species:1392
"Bacillus anthracis" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] EMBL:AE016879 EMBL:AE017334
EMBL:AE017225 GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR RefSeq:NP_845517.1 RefSeq:YP_019848.1
RefSeq:YP_029239.1 ProteinModelPortal:Q81NI5 IntAct:Q81NI5
DNASU:1087476 EnsemblBacteria:EBBACT00000012886
EnsemblBacteria:EBBACT00000015522 EnsemblBacteria:EBBACT00000022854
GeneID:1087476 GeneID:2817117 GeneID:2850799 KEGG:ban:BA_3207
KEGG:bar:GBAA_3207 KEGG:bat:BAS2982 HOGENOM:HOG000093512
OMA:EVSMAYV ProtClustDB:CLSK916959
BioCyc:BANT260799:GJAJ-3044-MONOMER
BioCyc:BANT261594:GJ7F-3148-MONOMER Uniprot:Q81NI5
Length = 759
Score = 177 (67.4 bits), Expect = 3.3e-09, P = 3.3e-09
Identities = 73/253 (28%), Positives = 115/253 (45%)
Query: 7 VVIDEAAQLKESESAIPLQLPCIQHAILVGDEVQLP--AMVESSVS----GE-AYFGRSL 59
VV+DE + + A+ L + ++ GD +QLP AM + GE ++ +
Sbjct: 338 VVVDEVSMAFVPQIALAASLG--KRIVVCGDFLQLPPIAMANHELVRKWLGEDMFYHAGI 395
Query: 60 FERLSYL-GHPK-HLLSMQYRMHPSISFFPNSYFYENKIRDAPTVRKRSYEKRFLPGPMY 117
E ++ HP +L Q RMH IS F NS+ Y+N++ D P+V +R + P
Sbjct: 396 VESVNKSEAHPNLFMLQEQRRMHADISKFTNSFIYKNRVYDHPSVSERKELAQLQPFANE 455
Query: 118 GPYSFINVFGGREEFIEHSCRNMVEVSVVMKILRNLYKAWVESKEKLSIGIVSPYSAQV- 176
F G + + + + + ++ + ++ + SIGIV+PY AQ
Sbjct: 456 ASVLFDTSQMGAFSLKDAASGSRFNIMSGLVAMQMMLIGLLDGVQ--SIGIVTPYRAQSR 513
Query: 177 ---IAIQEKLG-SKYEKIAGFAVKVKSIDGFQGGEEDIIIISTVRS---NNTGSIGFAST 229
I+E L +KY+ I A V FQG E D++I TV S G + F
Sbjct: 514 FLSTCIREMLQRTKYQNIPVLAATVHK---FQGSERDMMIFDTVDSYPQERPGVLFFDHK 570
Query: 230 PQR-INVALTRAR 241
R +NVA+TRAR
Sbjct: 571 NHRLVNVAVTRAR 583
>TIGR_CMR|BA_3207 [details] [associations]
symbol:BA_3207 "conserved domain protein" species:198094
"Bacillus anthracis str. Ames" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] EMBL:AE016879
EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR
RefSeq:NP_845517.1 RefSeq:YP_019848.1 RefSeq:YP_029239.1
ProteinModelPortal:Q81NI5 IntAct:Q81NI5 DNASU:1087476
EnsemblBacteria:EBBACT00000012886 EnsemblBacteria:EBBACT00000015522
EnsemblBacteria:EBBACT00000022854 GeneID:1087476 GeneID:2817117
GeneID:2850799 KEGG:ban:BA_3207 KEGG:bar:GBAA_3207 KEGG:bat:BAS2982
HOGENOM:HOG000093512 OMA:EVSMAYV ProtClustDB:CLSK916959
BioCyc:BANT260799:GJAJ-3044-MONOMER
BioCyc:BANT261594:GJ7F-3148-MONOMER Uniprot:Q81NI5
Length = 759
Score = 177 (67.4 bits), Expect = 3.3e-09, P = 3.3e-09
Identities = 73/253 (28%), Positives = 115/253 (45%)
Query: 7 VVIDEAAQLKESESAIPLQLPCIQHAILVGDEVQLP--AMVESSVS----GE-AYFGRSL 59
VV+DE + + A+ L + ++ GD +QLP AM + GE ++ +
Sbjct: 338 VVVDEVSMAFVPQIALAASLG--KRIVVCGDFLQLPPIAMANHELVRKWLGEDMFYHAGI 395
Query: 60 FERLSYL-GHPK-HLLSMQYRMHPSISFFPNSYFYENKIRDAPTVRKRSYEKRFLPGPMY 117
E ++ HP +L Q RMH IS F NS+ Y+N++ D P+V +R + P
Sbjct: 396 VESVNKSEAHPNLFMLQEQRRMHADISKFTNSFIYKNRVYDHPSVSERKELAQLQPFANE 455
Query: 118 GPYSFINVFGGREEFIEHSCRNMVEVSVVMKILRNLYKAWVESKEKLSIGIVSPYSAQV- 176
F G + + + + + ++ + ++ + SIGIV+PY AQ
Sbjct: 456 ASVLFDTSQMGAFSLKDAASGSRFNIMSGLVAMQMMLIGLLDGVQ--SIGIVTPYRAQSR 513
Query: 177 ---IAIQEKLG-SKYEKIAGFAVKVKSIDGFQGGEEDIIIISTVRS---NNTGSIGFAST 229
I+E L +KY+ I A V FQG E D++I TV S G + F
Sbjct: 514 FLSTCIREMLQRTKYQNIPVLAATVHK---FQGSERDMMIFDTVDSYPQERPGVLFFDHK 570
Query: 230 PQR-INVALTRAR 241
R +NVA+TRAR
Sbjct: 571 NHRLVNVAVTRAR 583
>FB|FBgn0030170 [details] [associations]
symbol:CG2990 species:7227 "Drosophila melanogaster"
[GO:0004003 "ATP-dependent DNA helicase activity" evidence=ISS]
[GO:0000014 "single-stranded DNA specific endodeoxyribonuclease
activity" evidence=ISS] [GO:0033567 "DNA replication, Okazaki
fragment processing" evidence=IEA] [GO:0017108 "5'-flap
endonuclease activity" evidence=IEA] [GO:0043142 "single-stranded
DNA-dependent ATPase activity" evidence=IEA] InterPro:IPR026851
InterPro:IPR014808 Pfam:PF08696 EMBL:AE014298 GO:GO:0006200
GO:GO:0017108 GO:GO:0043142 GO:GO:0033567 PANTHER:PTHR10887:SF14
KO:K10742 GeneTree:ENSGT00550000074852 OMA:EHESLCH
FlyBase:FBgn0030170 EMBL:BT088860 RefSeq:NP_727386.1
UniGene:Dm.17561 SMR:Q8IRL9 STRING:Q8IRL9
EnsemblMetazoa:FBtr0071415 GeneID:31934 KEGG:dme:Dmel_CG2990
UCSC:CG2990-RB InParanoid:Q8IRL9 GenomeRNAi:31934 NextBio:776017
Uniprot:Q8IRL9
Length = 1100
Score = 123 (48.4 bits), Expect = 3.9e-09, Sum P(2) = 3.9e-09
Identities = 38/122 (31%), Positives = 65/122 (53%)
Query: 139 NMVEVSVVMKILRNLYKAWVESKEKLSIGIVSPYSAQVIAIQEKLGSKYEKIAGFAVKVK 198
N E +VM +LR L K+ E+ IG+++PY AQV + +KL SK + ++
Sbjct: 944 NYCEAGIVMHLLRYLLKSGYEASR---IGVIAPYRAQV-ELFKKLASKLDT----DLECN 995
Query: 199 SIDGFQGGEEDIIIISTVRSNNTGS-------IGFASTPQRINVALTRARHCLWILGSER 251
++D FQG ++++II S ++ S +R+ VA+TRA++ L +LG +
Sbjct: 996 TVDQFQGRDKNLIIYSCSKTGGDFSDMERSREAEILEDQRRLTVAITRAKNKLILLGDIK 1055
Query: 252 TL 253
L
Sbjct: 1056 CL 1057
Score = 112 (44.5 bits), Expect = 3.9e-09, Sum P(2) = 3.9e-09
Identities = 31/97 (31%), Positives = 51/97 (52%)
Query: 3 QLKFVVIDEAAQLKESESAIPLQLPCIQHAILVGDEVQLPAMVESSVSGEAYFGRSLFER 62
Q + ++DEA Q+ + PL + C + +LVGD QLP +V S + + +LF+R
Sbjct: 764 QFDYCIVDEATQVLQPTVLRPL-IHCSKF-VLVGDPEQLPPIVRSKEARQRGADETLFQR 821
Query: 63 LSYLGHPKHLLSMQYRMHPSISFFPNSYFYENKIRDA 99
L +LS+QYRM+ +I+ N Y ++ A
Sbjct: 822 LDS-EKATAVLSLQYRMNKTITRLANELTYGGDLKCA 857
>FB|FBgn0036451 [details] [associations]
symbol:CG9425 species:7227 "Drosophila melanogaster"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR000571 InterPro:IPR003593
InterPro:IPR007087 InterPro:IPR011990 InterPro:IPR015880
Pfam:PF00642 PROSITE:PS00028 SMART:SM00355 SMART:SM00382
GO:GO:0005524 EMBL:AE014296 GO:GO:0008270 GO:GO:0003676
GO:GO:0005622 Gene3D:1.25.40.10 GO:GO:0017111 eggNOG:COG1112
GeneTree:ENSGT00550000074391 RefSeq:NP_996084.1 UniGene:Dm.11708
ProteinModelPortal:Q7KUL0 SMR:Q7KUL0 STRING:Q7KUL0 PaxDb:Q7KUL0
PRIDE:Q7KUL0 EnsemblMetazoa:FBtr0075693 EnsemblMetazoa:FBtr0333074
EnsemblMetazoa:FBtr0333075 GeneID:39613 KEGG:dme:Dmel_CG9425
UCSC:CG9425-RB FlyBase:FBgn0036451 InParanoid:Q7KUL0 OMA:WINELSG
OrthoDB:EOG46HDRH PhylomeDB:Q7KUL0 ChiTaRS:CG9425 GenomeRNAi:39613
NextBio:814517 ArrayExpress:Q7KUL0 Bgee:Q7KUL0 Uniprot:Q7KUL0
Length = 2103
Score = 200 (75.5 bits), Expect = 3.9e-09, Sum P(2) = 3.9e-09
Identities = 87/303 (28%), Positives = 136/303 (44%)
Query: 7 VVIDEAAQLKESESAIPLQLPCIQ-HAILVGDEVQLPAMVESSVSGEAYFGRSLFERLSY 65
+ +DEAAQ E E+ +PL L +L GD +Q+ + S+ + E SL ERL Y
Sbjct: 954 IFLDEAAQAMECEAIMPLALANDSTRIVLAGDHMQMSPELFSAFAKERKLHISLLERL-Y 1012
Query: 66 LGHP-----KHLLSMQYRMHPSISFFPNSYFYENKIRDAPTVRKRSYEKRFLPGPMYGPY 120
+P K LL YR H +I F + FYE K+ + K+ RF Y P
Sbjct: 1013 DHYPSNFPCKILLCENYRAHEAIIRFTSELFYEQKLVASG---KQPRHDRF-----Y-PL 1063
Query: 121 SFINVFGGR-EEFIEHSCRNMVEVSVVMKILRNLYKAWVESKEKL---SIGIVSPYSAQV 176
+F G ++ + N EV V++ + L K W + KL SIGI++PYS QV
Sbjct: 1064 TFFTTRGEDVQDKNSTAFYNNAEVYEVVERVSELRKRWPSAWGKLNDTSIGIMTPYSDQV 1123
Query: 177 IAIQEKLGSKYEKIAGFAVKVKSIDGFQGGEEDIIIISTVRSNNT--------GSI---- 224
I+ +L + ++ G + V+ + QG + + +STVR+ T GS
Sbjct: 1124 FRIRSELRKR--RMGG--ISVERVLNVQGKQFRAVFLSTVRTRRTCMPQGSAPGSASTTS 1179
Query: 225 --------GFASTPQRINVALTRARHCLWILGSERTL---NHSESVWESLLDDAKARQCF 273
GF S + +N A+TRA+ + ++G L VWE ++ +
Sbjct: 1180 IGDADADYGFLSNSKLLNTAITRAQSLVAVVGDPVALCSIGRCRKVWERFIEICDEHKSL 1239
Query: 274 FNI 276
F +
Sbjct: 1240 FGL 1242
Score = 40 (19.1 bits), Expect = 3.9e-09, Sum P(2) = 3.9e-09
Identities = 7/23 (30%), Positives = 14/23 (60%)
Query: 1382 KILQKFVELSTEHFFDFIFPVDW 1404
K+ ++F+E+ EH +F + W
Sbjct: 1224 KVWERFIEICDEH--KSLFGLTW 1244
>UNIPROTKB|F1MKC7 [details] [associations]
symbol:Bt.110099 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000571
InterPro:IPR011990 Pfam:PF00642 PROSITE:PS50103 SMART:SM00356
GO:GO:0008270 GO:GO:0003676 Gene3D:1.25.40.10 OMA:YRVALLY
GeneTree:ENSGT00550000074391 EMBL:DAAA02049790 EMBL:DAAA02049791
EMBL:DAAA02049792 EMBL:DAAA02049793 EMBL:DAAA02049794
EMBL:DAAA02049795 EMBL:DAAA02049796 EMBL:DAAA02049797
EMBL:DAAA02049798 EMBL:DAAA02049799 IPI:IPI00698970
Ensembl:ENSBTAT00000006233 Uniprot:F1MKC7
Length = 1941
Score = 194 (73.4 bits), Expect = 4.9e-09, Sum P(3) = 4.9e-09
Identities = 71/226 (31%), Positives = 112/226 (49%)
Query: 7 VVIDEAAQLKESESAIPLQLPCIQHA--ILVGDEVQLPAMVESSVSGEAYFGRSLFERLS 64
+++DEAAQ E E+ +PL L +H +L GD +QL V S + E SL +RL
Sbjct: 796 ILLDEAAQAMECETIMPLAL-ATRHTRVVLAGDHMQLSPFVYSEFARERNLHVSLLDRL- 853
Query: 65 YLGHPKH-----LLSMQYRMHPSISFFPNSYFYENKIRDAPTVRKRSYEKRFLPGPMYGP 119
Y +P LL YR H +I + + FYE K+ + K+ K F Y P
Sbjct: 854 YEHYPAEFPCRILLCENYRSHEAIINYTSELFYEGKLMASG---KQPAHKEF-----Y-P 904
Query: 120 YSFINVFGGR-EEFIEHSCRNMVEVSVVMKILRNLYKAWVESKEKL---SIGIVSPYSAQ 175
+F G +E + N EV V++ + L + W + KL SIG+V+PY+ Q
Sbjct: 905 LTFFTARGEDVQEKNSTAFYNNAEVFEVVERVEELRRKWPVAWGKLDDGSIGVVTPYADQ 964
Query: 176 VIAIQEKLGSKYEKIAGFAVKVKSIDGFQGGEEDIIIISTVRSNNT 221
V I+ +L K +++ V V+ + QG + ++ +STVR+ +T
Sbjct: 965 VFRIRAELRKK--RLSD--VNVERVLNVQGKQFRVLFLSTVRTRHT 1006
Score = 49 (22.3 bits), Expect = 4.9e-09, Sum P(3) = 4.9e-09
Identities = 12/35 (34%), Positives = 17/35 (48%)
Query: 822 LVQVRQLDDSLAQAMQVASSPEEWKSRGIKLFYEN 856
L Q ++L D Q+ SSPE W + Y+N
Sbjct: 1780 LAQRKELQDHNNQSSFTFSSPESWVNATSSTPYQN 1814
Score = 48 (22.0 bits), Expect = 4.9e-09, Sum P(3) = 4.9e-09
Identities = 12/43 (27%), Positives = 20/43 (46%)
Query: 225 GFASTPQRINVALTRARHCLWILGSERTL---NHSESVWESLL 264
GF S + +N A+TRA+ + ++G L WE +
Sbjct: 1031 GFLSNYKLLNTAITRAQSLVAVVGDPIALCSIGRCRKFWERFI 1073
Score = 43 (20.2 bits), Expect = 6.7e-09, Sum P(2) = 6.7e-09
Identities = 8/17 (47%), Positives = 12/17 (70%)
Query: 1687 IGNPLVLVSLGDNCPKF 1703
+G+P+ L S+G C KF
Sbjct: 1053 VGDPIALCSIG-RCRKF 1068
Score = 39 (18.8 bits), Expect = 1.7e-08, Sum P(2) = 1.7e-08
Identities = 12/42 (28%), Positives = 21/42 (50%)
Query: 1789 KLKQFWNIFEALEFEDNGIDTKTIV-FKSSTIKEDVKKSIQL 1829
+ ++FW F AL E+N + T K+ ++KK+ L
Sbjct: 1064 RCRKFWERFIALCHENNSLHGITFEQIKAQLEALELKKTYVL 1105
>DICTYBASE|DDB_G0274777 [details] [associations]
symbol:DDB_G0274777 "DNA replication helicase"
species:44689 "Dictyostelium discoideum" [GO:0006261 "DNA-dependent
DNA replication" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0004003 "ATP-dependent DNA helicase activity" evidence=ISS]
[GO:0004386 "helicase activity" evidence=IEA] InterPro:IPR014808
dictyBase:DDB_G0274777 Pfam:PF08696 GO:GO:0005634 GO:GO:0006261
EMBL:AAFI02000012 GO:GO:0004003 eggNOG:COG1112 InterPro:IPR014001
SMART:SM00487 KO:K10742 RefSeq:XP_643888.1
ProteinModelPortal:Q86IV6 EnsemblProtists:DDB0233088 GeneID:8619314
KEGG:ddi:DDB_G0274777 InParanoid:Q86IV6 Uniprot:Q86IV6
Length = 1838
Score = 128 (50.1 bits), Expect = 7.4e-09, Sum P(2) = 7.4e-09
Identities = 35/96 (36%), Positives = 53/96 (55%)
Query: 3 QLKFVVIDEAAQLKESESAIPLQLPCIQHAILVGDEVQLPAMVESSVSGEAYFGRSLFER 62
Q + +IDEA+ L + S P+ L C + +LVGD QLP +V + +G+ SLF++
Sbjct: 1450 QFDYCIIDEASILSQPISMGPI-LKC-KSFVLVGDHHQLPPIVNNKEAGKLGLDISLFKQ 1507
Query: 63 LSYLGHPKHLLSM--QYRMHPSISFFPNSYFYENKI 96
LS HP + ++ QYRM SI N Y N++
Sbjct: 1508 LS-TSHPSSVSNLYHQYRMCNSIMSLSNHLIYNNRL 1542
Score = 109 (43.4 bits), Expect = 7.4e-09, Sum P(2) = 7.4e-09
Identities = 27/59 (45%), Positives = 38/59 (64%)
Query: 197 VKSIDGFQGGEEDIIIISTVRSNNTGSIG-FASTPQRINVALTRARHCLWILGSERTLN 254
+ +ID FQG ++D IIIS VRSN IG +R+NVA TRA+ L +GS+ +L+
Sbjct: 1753 ILTIDKFQGKDKDCIIISFVRSNEKKEIGELIKDWKRMNVAFTRAKKKLIFVGSKSSLS 1811
>UNIPROTKB|F1RXR7 [details] [associations]
symbol:MOV10L1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0007283 "spermatogenesis" evidence=IEA] [GO:0007281
"germ cell development" evidence=IEA] GO:GO:0007283 GO:GO:0007281
GeneTree:ENSGT00550000074391 OMA:NMSGVTL InterPro:IPR026125
PANTHER:PTHR10887:SF6 EMBL:BX321913 Ensembl:ENSSSCT00000001066
Uniprot:F1RXR7
Length = 1211
Score = 174 (66.3 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 79/261 (30%), Positives = 116/261 (44%)
Query: 33 ILVGDEVQLPAMVESSVSGEAYFGRSLFERL----SYL---------GHPKHLLSMQ--- 76
IL GD +QL +++S ++ S+ ERL +YL G LL +
Sbjct: 909 ILAGDPMQLGPVIKSRLAMAYGLNVSMLERLMARPAYLRDEDAFGACGAYNPLLVTKLVK 968
Query: 77 -YRMHPSISFFPNSYFYENKIR---DAPTVRKR-SYEKRFLPGPMYGPYSFINVFGGR-E 130
YR H ++ P+ FY ++ D V +EK LP + P F V G
Sbjct: 969 NYRSHSALLALPSRLFYHRELEVCADPKVVTSLLGWEK--LPRKGF-PLVFHGVRGTEAR 1025
Query: 131 EFIEHSCRNMVEVSVVMKILRNLYKAWVESKEKLSIGIVSPYSAQVIAIQEKLGSKYEKI 190
E S N E VM+ L ++ IG+++PY QV EK+ +
Sbjct: 1026 EGRSPSWFNPTEAVQVMRYCCLLARSVSSQVSAGDIGVITPYRKQV----EKIKILLRNV 1081
Query: 191 AGFAVKVKSIDGFQGGEEDIIIISTVRSNNTGS------IGFASTPQRINVALTRARHCL 244
VKV S++ FQG E +IIISTVRSN +GF S +R NVA+TR + L
Sbjct: 1082 GLAEVKVGSVEEFQGQEYLVIIISTVRSNEDRFEDDRYFLGFLSNSKRFNVAITRPKALL 1141
Query: 245 WILGSERTLNHSESVWESLLD 265
+LG+ L + + +LL+
Sbjct: 1142 IVLGNPHVLVRQDPCFGALLE 1162
>WB|WBGene00019529 [details] [associations]
symbol:K08D10.5 species:6239 "Caenorhabditis elegans"
[GO:0004386 "helicase activity" evidence=IEA] eggNOG:COG1112
EMBL:FO081596 GeneTree:ENSGT00530000065249 PIR:T29386
RefSeq:NP_500503.1 UniGene:Cel.27256 ProteinModelPortal:Q21321
SMR:Q21321 PaxDb:Q21321 EnsemblMetazoa:K08D10.5 GeneID:187150
KEGG:cel:CELE_K08D10.5 UCSC:K08D10.5 CTD:187150 WormBase:K08D10.5
InParanoid:Q21321 OMA:KEINIFR NextBio:934280 Uniprot:Q21321
Length = 602
Score = 169 (64.5 bits), Expect = 1.7e-08, P = 1.7e-08
Identities = 70/253 (27%), Positives = 113/253 (44%)
Query: 9 IDEAAQLKESE-SAIPLQLPCIQHAILVGDEVQLPAMVESSVSGEAYFGRSLFERLSYLG 67
IDEA+QL ++ LP + ILVGD QLP E ++ E ++ E L+
Sbjct: 320 IDEASQLALYVLGSLATLLPKTR-IILVGDMHQLPPYTEDALPAELKRA-AVGEPLTLAV 377
Query: 68 HPKHLLSMQY-RMH--PS-ISFFPNSYFYENKIRDAPTVRKRSYEKRFLPGPMYGPYSFI 123
+ SM R+H P I+ + FY N + R + P + P+ F+
Sbjct: 378 KGRRWSSMHLTRVHRCPKMITDLLGAVFYGNTLTSTRKAVNRVPILEAMELPSHHPFVFV 437
Query: 124 NVFGGREEFIEHSCRNMVEVSVVMKILRNLYKAWVESKEKLSIGIVSPYSAQVIAIQEKL 183
N + + + S N E ++++ L + E +S+ +++ Y AQ +
Sbjct: 438 NYISQQTQ-VGKSFSNENEARYALQLVTALKRHAREQNTTVSVAVLNFYGAQYSYV---- 492
Query: 184 GSKYEKIAGFAVKVKSIDGFQGGEEDIIIISTVRSNNTGSIGFASTPQRINVALTRARHC 243
Y IA V+V +IDG QG E D+ I+ RS+ F P RINVAL+R++
Sbjct: 493 ---YS-IAEDGVRVNTIDGCQGQEYDVSIVLLTRSDPYEKSKFLVNPNRINVALSRSKMA 548
Query: 244 LWILGSERTL-NH 255
++G + NH
Sbjct: 549 TVVIGQRHLIGNH 561
>UNIPROTKB|P42694 [details] [associations]
symbol:HELZ "Probable helicase with zinc finger domain"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000571 Pfam:PF00642 PROSITE:PS50103 SMART:SM00356
GO:GO:0005524 GO:GO:0005634 GO:GO:0046872 GO:GO:0008270
GO:GO:0003676 GO:GO:0004386 eggNOG:COG1112 HOVERGEN:HBG031603
OrthoDB:EOG4NP72K EMBL:D29677 EMBL:AC005544 EMBL:AC007448
IPI:IPI00000897 UniGene:Hs.370140 UniGene:Hs.569824
ProteinModelPortal:P42694 SMR:P42694 IntAct:P42694 STRING:P42694
PhosphoSite:P42694 DMDM:221222452 PaxDb:P42694 PRIDE:P42694
Ensembl:ENST00000358691 UCSC:uc002jfx.4 GeneCards:GC17M065066
HGNC:HGNC:16878 HPA:HPA028276 MIM:606699 neXtProt:NX_P42694
InParanoid:P42694 OMA:YRVALLY ChiTaRS:HELZ ArrayExpress:P42694
Bgee:P42694 CleanEx:HS_HELZ Genevestigator:P42694
GermOnline:ENSG00000198265 Uniprot:P42694
Length = 1942
Score = 189 (71.6 bits), Expect = 2.2e-08, Sum P(2) = 2.2e-08
Identities = 70/225 (31%), Positives = 110/225 (48%)
Query: 7 VVIDEAAQLKESESAIPLQLPCIQ-HAILVGDEVQLPAMVESSVSGEAYFGRSLFERLSY 65
+++DEAAQ E E+ +PL L +L GD +QL V S + E SL +RL Y
Sbjct: 791 ILLDEAAQAMECETIMPLALATQNTRIVLAGDHMQLSPFVYSEFARERNLHVSLLDRL-Y 849
Query: 66 LGHPKH-----LLSMQYRMHPSISFFPNSYFYENKIRDAPTVRKRSYEKRFLPGPMYGPY 120
+P LL YR H +I + + FYE K+ + K+ K F Y P
Sbjct: 850 EHYPAEFPCRILLCENYRSHEAIINYTSELFYEGKLMASG---KQPAHKDF-----Y-PL 900
Query: 121 SFINVFGGR-EEFIEHSCRNMVEVSVVMKILRNLYKAWVESKEKL---SIGIVSPYSAQV 176
+F G +E + N EV V++ + L + W + KL SIG+V+PY+ QV
Sbjct: 901 TFFTARGEDVQEKNSTAFYNNAEVFEVVERVEELRRKWPVAWGKLDDGSIGVVTPYADQV 960
Query: 177 IAIQEKLGSKYEKIAGFAVKVKSIDGFQGGEEDIIIISTVRSNNT 221
I+ +L K +++ V V+ + QG + ++ +STVR+ +T
Sbjct: 961 FRIRAELRKK--RLSD--VNVERVLNVQGKQFRVLFLSTVRTRHT 1001
Score = 49 (22.3 bits), Expect = 1.5e-07, Sum P(4) = 1.5e-07
Identities = 12/35 (34%), Positives = 17/35 (48%)
Query: 822 LVQVRQLDDSLAQAMQVASSPEEWKSRGIKLFYEN 856
L Q ++L D Q+ SSPE W + Y+N
Sbjct: 1781 LAQCKELQDHSNQSSFNFSSPESWVNTTSSTPYQN 1815
Score = 48 (22.0 bits), Expect = 1.5e-07, Sum P(4) = 1.5e-07
Identities = 12/43 (27%), Positives = 20/43 (46%)
Query: 225 GFASTPQRINVALTRARHCLWILGSERTL---NHSESVWESLL 264
GF S + +N A+TRA+ + ++G L WE +
Sbjct: 1026 GFLSNYKLLNTAITRAQSLVAVVGDPIALCSIGRCRKFWERFI 1068
Score = 43 (20.2 bits), Expect = 2.2e-08, Sum P(2) = 2.2e-08
Identities = 8/17 (47%), Positives = 12/17 (70%)
Query: 1687 IGNPLVLVSLGDNCPKF 1703
+G+P+ L S+G C KF
Sbjct: 1048 VGDPIALCSIG-RCRKF 1063
Score = 40 (19.1 bits), Expect = 1.1e-06, Sum P(4) = 1.1e-06
Identities = 7/25 (28%), Positives = 14/25 (56%)
Query: 435 NLEVPKTWAVTSNIVRFKNLADNES 459
N P++W T++ ++N+ N S
Sbjct: 1797 NFSSPESWVNTTSSTPYQNIPCNGS 1821
Score = 39 (18.8 bits), Expect = 1.5e-07, Sum P(4) = 1.5e-07
Identities = 8/27 (29%), Positives = 15/27 (55%)
Query: 1122 KQFTEKKELFEKAKSLAKSNSNQFYEF 1148
K+ ++ LF++ + S SN FY +
Sbjct: 1914 KKSSDPLSLFQELSLGSSSGSNGFYSY 1940
>UNIPROTKB|J3QS41 [details] [associations]
symbol:HELZ "Probable helicase with zinc finger domain"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR000571 Pfam:PF00642 PROSITE:PS50103 SMART:SM00356
GO:GO:0008270 GO:GO:0003676 EMBL:AC005544 EMBL:AC007448
HGNC:HGNC:16878 ChiTaRS:HELZ Ensembl:ENST00000580168 Uniprot:J3QS41
Length = 1943
Score = 189 (71.6 bits), Expect = 2.2e-08, Sum P(2) = 2.2e-08
Identities = 70/225 (31%), Positives = 110/225 (48%)
Query: 7 VVIDEAAQLKESESAIPLQLPCIQ-HAILVGDEVQLPAMVESSVSGEAYFGRSLFERLSY 65
+++DEAAQ E E+ +PL L +L GD +QL V S + E SL +RL Y
Sbjct: 792 ILLDEAAQAMECETIMPLALATQNTRIVLAGDHMQLSPFVYSEFARERNLHVSLLDRL-Y 850
Query: 66 LGHPKH-----LLSMQYRMHPSISFFPNSYFYENKIRDAPTVRKRSYEKRFLPGPMYGPY 120
+P LL YR H +I + + FYE K+ + K+ K F Y P
Sbjct: 851 EHYPAEFPCRILLCENYRSHEAIINYTSELFYEGKLMASG---KQPAHKDF-----Y-PL 901
Query: 121 SFINVFGGR-EEFIEHSCRNMVEVSVVMKILRNLYKAWVESKEKL---SIGIVSPYSAQV 176
+F G +E + N EV V++ + L + W + KL SIG+V+PY+ QV
Sbjct: 902 TFFTARGEDVQEKNSTAFYNNAEVFEVVERVEELRRKWPVAWGKLDDGSIGVVTPYADQV 961
Query: 177 IAIQEKLGSKYEKIAGFAVKVKSIDGFQGGEEDIIIISTVRSNNT 221
I+ +L K +++ V V+ + QG + ++ +STVR+ +T
Sbjct: 962 FRIRAELRKK--RLSD--VNVERVLNVQGKQFRVLFLSTVRTRHT 1002
Score = 49 (22.3 bits), Expect = 1.5e-07, Sum P(4) = 1.5e-07
Identities = 12/35 (34%), Positives = 17/35 (48%)
Query: 822 LVQVRQLDDSLAQAMQVASSPEEWKSRGIKLFYEN 856
L Q ++L D Q+ SSPE W + Y+N
Sbjct: 1782 LAQCKELQDHSNQSSFNFSSPESWVNTTSSTPYQN 1816
Score = 48 (22.0 bits), Expect = 1.5e-07, Sum P(4) = 1.5e-07
Identities = 12/43 (27%), Positives = 20/43 (46%)
Query: 225 GFASTPQRINVALTRARHCLWILGSERTL---NHSESVWESLL 264
GF S + +N A+TRA+ + ++G L WE +
Sbjct: 1027 GFLSNYKLLNTAITRAQSLVAVVGDPIALCSIGRCRKFWERFI 1069
Score = 43 (20.2 bits), Expect = 2.2e-08, Sum P(2) = 2.2e-08
Identities = 8/17 (47%), Positives = 12/17 (70%)
Query: 1687 IGNPLVLVSLGDNCPKF 1703
+G+P+ L S+G C KF
Sbjct: 1049 VGDPIALCSIG-RCRKF 1064
Score = 40 (19.1 bits), Expect = 1.1e-06, Sum P(4) = 1.1e-06
Identities = 7/25 (28%), Positives = 14/25 (56%)
Query: 435 NLEVPKTWAVTSNIVRFKNLADNES 459
N P++W T++ ++N+ N S
Sbjct: 1798 NFSSPESWVNTTSSTPYQNIPCNGS 1822
Score = 39 (18.8 bits), Expect = 1.5e-07, Sum P(4) = 1.5e-07
Identities = 8/27 (29%), Positives = 15/27 (55%)
Query: 1122 KQFTEKKELFEKAKSLAKSNSNQFYEF 1148
K+ ++ LF++ + S SN FY +
Sbjct: 1915 KKSSDPLSLFQELSLGSSSGSNGFYSY 1941
>UNIPROTKB|F1RSM3 [details] [associations]
symbol:HELZ "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000571
Pfam:PF00642 PROSITE:PS50103 SMART:SM00356 GO:GO:0008270
GO:GO:0003676 CTD:9931 OMA:YRVALLY GeneTree:ENSGT00550000074391
EMBL:CU466377 EMBL:CU639426 EMBL:CU929837 RefSeq:XP_003131321.1
UniGene:Ssc.13421 Ensembl:ENSSSCT00000018802 GeneID:100524104
KEGG:ssc:100524104 Uniprot:F1RSM3
Length = 1944
Score = 189 (71.6 bits), Expect = 2.2e-08, Sum P(2) = 2.2e-08
Identities = 70/225 (31%), Positives = 110/225 (48%)
Query: 7 VVIDEAAQLKESESAIPLQLPCIQ-HAILVGDEVQLPAMVESSVSGEAYFGRSLFERLSY 65
+++DEAAQ E E+ +PL L +L GD +QL V S + E SL +RL Y
Sbjct: 791 ILLDEAAQAMECETIMPLALATKNTRIVLAGDHMQLSPFVYSEFARERNLHVSLLDRL-Y 849
Query: 66 LGHPKH-----LLSMQYRMHPSISFFPNSYFYENKIRDAPTVRKRSYEKRFLPGPMYGPY 120
+P LL YR H +I + + FYE K+ + K+ K F Y P
Sbjct: 850 EHYPAEFPCRILLCENYRSHEAIINYTSELFYEGKLMASG---KQPAHKDF-----Y-PL 900
Query: 121 SFINVFGGR-EEFIEHSCRNMVEVSVVMKILRNLYKAWVESKEKL---SIGIVSPYSAQV 176
+F G +E + N EV V++ + L + W + KL SIG+V+PY+ QV
Sbjct: 901 TFFTARGEDVQEKNSTAFYNNAEVFEVVERVEELRRKWPVAWGKLDDGSIGVVTPYADQV 960
Query: 177 IAIQEKLGSKYEKIAGFAVKVKSIDGFQGGEEDIIIISTVRSNNT 221
I+ +L K +++ V V+ + QG + ++ +STVR+ +T
Sbjct: 961 FRIRAELRKK--RLSD--VNVERVLNVQGKQFRVLFLSTVRTRHT 1001
Score = 48 (22.0 bits), Expect = 1.8e-07, Sum P(4) = 1.8e-07
Identities = 12/35 (34%), Positives = 17/35 (48%)
Query: 822 LVQVRQLDDSLAQAMQVASSPEEWKSRGIKLFYEN 856
L Q ++L D Q+ SSPE W + Y+N
Sbjct: 1783 LAQCKELQDHNNQSSFNFSSPESWVNTTSSTPYQN 1817
Score = 48 (22.0 bits), Expect = 1.8e-07, Sum P(4) = 1.8e-07
Identities = 12/43 (27%), Positives = 20/43 (46%)
Query: 225 GFASTPQRINVALTRARHCLWILGSERTL---NHSESVWESLL 264
GF S + +N A+TRA+ + ++G L WE +
Sbjct: 1026 GFLSNYKLLNTAITRAQSLVAVVGDPIALCSIGRCRKFWERFI 1068
Score = 43 (20.2 bits), Expect = 2.2e-08, Sum P(2) = 2.2e-08
Identities = 8/17 (47%), Positives = 12/17 (70%)
Query: 1687 IGNPLVLVSLGDNCPKF 1703
+G+P+ L S+G C KF
Sbjct: 1048 VGDPIALCSIG-RCRKF 1063
Score = 40 (19.1 bits), Expect = 1.1e-06, Sum P(4) = 1.1e-06
Identities = 7/25 (28%), Positives = 14/25 (56%)
Query: 435 NLEVPKTWAVTSNIVRFKNLADNES 459
N P++W T++ ++N+ N S
Sbjct: 1799 NFSSPESWVNTTSSTPYQNIPCNGS 1823
Score = 39 (18.8 bits), Expect = 5.8e-08, Sum P(2) = 5.8e-08
Identities = 12/42 (28%), Positives = 21/42 (50%)
Query: 1789 KLKQFWNIFEALEFEDNGIDTKTIV-FKSSTIKEDVKKSIQL 1829
+ ++FW F AL E+N + T K+ ++KK+ L
Sbjct: 1059 RCRKFWERFIALCHENNSLHGITFEQIKAQLEALELKKTYVL 1100
Score = 39 (18.8 bits), Expect = 1.8e-07, Sum P(4) = 1.8e-07
Identities = 8/27 (29%), Positives = 15/27 (55%)
Query: 1122 KQFTEKKELFEKAKSLAKSNSNQFYEF 1148
K+ ++ LF++ + S SN FY +
Sbjct: 1916 KKSSDPLSLFQELSLGSSSGSNGFYSY 1942
Score = 38 (18.4 bits), Expect = 1.6e-06, Sum P(3) = 1.6e-06
Identities = 11/41 (26%), Positives = 16/41 (39%)
Query: 219 NNTGSIGFASTPQRINVALTRARHCLWILGSERTLNHSESV 259
NN S F+S +N + + GS RT E +
Sbjct: 1793 NNQSSFNFSSPESWVNTTSSTPYQNIPCNGSSRTAQPRELI 1833
>UNIPROTKB|G3X7G5 [details] [associations]
symbol:MOV10L1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0007283 "spermatogenesis" evidence=IEA] [GO:0007281
"germ cell development" evidence=IEA] GO:GO:0007283 GO:GO:0007281
GeneTree:ENSGT00550000074391 OMA:NMSGVTL InterPro:IPR026125
PANTHER:PTHR10887:SF6 EMBL:DAAA02015125 EMBL:DAAA02015122
EMBL:DAAA02015123 EMBL:DAAA02015124 Ensembl:ENSBTAT00000027109
Uniprot:G3X7G5
Length = 1214
Score = 171 (65.3 bits), Expect = 2.7e-08, P = 2.7e-08
Identities = 75/249 (30%), Positives = 111/249 (44%)
Query: 33 ILVGDEVQLPAMVESSVSGEAYFGRSLFERL----SYL---------GHPKHLLSMQ--- 76
+L GD +QL +++S ++ S+ ERL +YL G LL +
Sbjct: 914 VLAGDPMQLGPVIKSRLAMAYGLNVSMLERLMSRPAYLRDEDAFGACGAYNPLLVTKLVK 973
Query: 77 -YRMHPSISFFPNSYFYENKIRDA--PTVRKR--SYEKRFLPGPMYGPYSFINVFGGR-E 130
YR H ++ P+ FY ++ PTV +EK LP + P F V G
Sbjct: 974 NYRSHSALLALPSRLFYHRELEVCADPTVVASLLGWEK--LPRKGF-PLIFHGVRGNEAR 1030
Query: 131 EFIEHSCRNMVEVSVVMKILRNLYKAWVESKEKLSIGIVSPYSAQVIAIQEKLGSKYEKI 190
E S N E VM+ L ++ IG+++PY QV EK+ +
Sbjct: 1031 EGRSPSWFNPAEAVQVMRYCCMLARSVSSQVSARDIGVITPYRKQV----EKIKILLRNV 1086
Query: 191 AGFAVKVKSIDGFQGGEEDIIIISTVRSNNTGS------IGFASTPQRINVALTRARHCL 244
+KV S++ FQG E ++IISTVRSN +GF S +R NVA+TR + L
Sbjct: 1087 DLMDIKVGSVEEFQGQEYLVVIISTVRSNEDRFEDDRYFLGFLSNSKRFNVAITRPKALL 1146
Query: 245 WILGSERTL 253
+LG+ L
Sbjct: 1147 IVLGNPHVL 1155
>MGI|MGI:1925705 [details] [associations]
symbol:Helz "helicase with zinc finger domain" species:10090
"Mus musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR000571
Pfam:PF00642 PROSITE:PS50103 SMART:SM00356 MGI:MGI:1925705
GO:GO:0005524 GO:GO:0005634 GO:GO:0046872 GO:GO:0008270
GO:GO:0003676 GO:GO:0004386 eggNOG:COG1112 CTD:9931
HOGENOM:HOG000231202 HOVERGEN:HBG031603 EMBL:AB093209 EMBL:AL645947
EMBL:BC021818 EMBL:BC076626 EMBL:BC130582 EMBL:AK033094
IPI:IPI00453654 IPI:IPI00649664 IPI:IPI00915056 RefSeq:NP_938040.1
UniGene:Mm.272047 UniGene:Mm.394603 UniGene:Mm.490425
ProteinModelPortal:Q6DFV5 SMR:Q6DFV5 IntAct:Q6DFV5 STRING:Q6DFV5
PhosphoSite:Q6DFV5 PaxDb:Q6DFV5 PRIDE:Q6DFV5
Ensembl:ENSMUST00000075012 Ensembl:ENSMUST00000106746 GeneID:78455
KEGG:mmu:78455 UCSC:uc007mav.1 GeneTree:ENSGT00550000074391
InParanoid:Q8BZZ6 NextBio:348914 Bgee:Q6DFV5 Genevestigator:Q6DFV5
Uniprot:Q6DFV5
Length = 1964
Score = 190 (71.9 bits), Expect = 3.3e-08, Sum P(3) = 3.3e-08
Identities = 71/225 (31%), Positives = 110/225 (48%)
Query: 7 VVIDEAAQLKESESAIPLQLPCIQ-HAILVGDEVQLPAMVESSVSGEAYFGRSLFERLSY 65
V++DEAAQ E E+ +PL L +L GD +QL V S + E SL +RL Y
Sbjct: 791 VLLDEAAQAMECETIMPLALATKNTRIVLAGDHMQLSPFVYSEFARERNLHVSLLDRL-Y 849
Query: 66 LGHPKH-----LLSMQYRMHPSISFFPNSYFYENKIRDAPTVRKRSYEKRFLPGPMYGPY 120
+P LL YR H +I + + FYE K+ + K+ K F Y P
Sbjct: 850 EHYPAEFPCRILLCENYRSHEAIINYTSELFYEGKLMASG---KQPAHKDF-----Y-PL 900
Query: 121 SFINVFGGR-EEFIEHSCRNMVEVSVVMKILRNLYKAWVESKEKL---SIGIVSPYSAQV 176
+F G +E + N EV V++ + L + W + KL SIG+V+PY+ QV
Sbjct: 901 TFFTARGEDVQEKNSTAFYNNAEVFEVVERVEELRRKWPVAWGKLDDGSIGVVTPYADQV 960
Query: 177 IAIQEKLGSKYEKIAGFAVKVKSIDGFQGGEEDIIIISTVRSNNT 221
I+ +L K +++ V V+ + QG + ++ +STVR+ +T
Sbjct: 961 FRIRAELRKK--RLSD--VNVERVLNVQGKQFRVLFLSTVRTRHT 1001
Score = 48 (22.0 bits), Expect = 3.3e-08, Sum P(3) = 3.3e-08
Identities = 12/43 (27%), Positives = 20/43 (46%)
Query: 225 GFASTPQRINVALTRARHCLWILGSERTL---NHSESVWESLL 264
GF S + +N A+TRA+ + ++G L WE +
Sbjct: 1026 GFLSNYKLLNTAITRAQSLVAVVGDPVALCSIGRCRKFWERFI 1068
Score = 45 (20.9 bits), Expect = 3.3e-08, Sum P(3) = 3.3e-08
Identities = 8/25 (32%), Positives = 15/25 (60%)
Query: 435 NLEVPKTWAVTSNIVRFKNLADNES 459
N P++WA T++ ++N+ N S
Sbjct: 1819 NFPAPESWANTTSSAPYQNIPCNGS 1843
Score = 37 (18.1 bits), Expect = 2.1e-07, Sum P(3) = 2.1e-07
Identities = 8/21 (38%), Positives = 13/21 (61%)
Query: 557 KEQFDGVNNSLTLHTSWEVEA 577
+E DGV+ S+ L T + +A
Sbjct: 1515 EEALDGVHGSVALETLRQQQA 1535
>UNIPROTKB|F1NPN9 [details] [associations]
symbol:LOC100857488 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR000571
InterPro:IPR011990 Pfam:PF00642 PROSITE:PS50103 SMART:SM00356
GO:GO:0008270 GO:GO:0003676 Gene3D:1.25.40.10 OMA:YRVALLY
GeneTree:ENSGT00550000074391 EMBL:AADN02030025 IPI:IPI00575663
Ensembl:ENSGALT00000005876 Uniprot:F1NPN9
Length = 1931
Score = 187 (70.9 bits), Expect = 3.6e-08, Sum P(2) = 3.6e-08
Identities = 70/225 (31%), Positives = 110/225 (48%)
Query: 7 VVIDEAAQLKESESAIPLQLPCIQ-HAILVGDEVQLPAMVESSVSGEAYFGRSLFERLSY 65
+++DEAAQ E E+ +PL L +L GD +QL V S + E SL +RL Y
Sbjct: 780 ILLDEAAQAMECETIMPLALANKNTRIVLAGDHMQLSPFVYSEFARERNLHVSLLDRL-Y 838
Query: 66 LGHPKH-----LLSMQYRMHPSISFFPNSYFYENKIRDAPTVRKRSYEKRFLPGPMYGPY 120
+P LL YR H +I + + FYE K+ + K+ K F Y P
Sbjct: 839 EHYPAEFPCRILLCENYRSHEAIINYTSELFYEGKLMASG---KQPAHKDF-----Y-PL 889
Query: 121 SFINVFGGR-EEFIEHSCRNMVEVSVVMKILRNLYKAWVESKEKL---SIGIVSPYSAQV 176
+F G +E + N EV V++ + L + W + KL SIG+V+PY+ QV
Sbjct: 890 TFFTARGEDVQEKNSTAFYNNAEVFEVVERVEELRRKWPVAWGKLDDGSIGVVTPYADQV 949
Query: 177 IAIQEKLGSKYEKIAGFAVKVKSIDGFQGGEEDIIIISTVRSNNT 221
I+ +L K +++ V V+ + QG + ++ +STVR+ +T
Sbjct: 950 FRIRAELRKK--RLSD--VSVERVLNVQGKQFRVLFLSTVRTRHT 990
Score = 48 (22.0 bits), Expect = 6.7e-06, Sum P(5) = 6.7e-06
Identities = 12/43 (27%), Positives = 20/43 (46%)
Query: 225 GFASTPQRINVALTRARHCLWILGSERTL---NHSESVWESLL 264
GF S + +N A+TRA+ + ++G L WE +
Sbjct: 1015 GFLSNYKLLNTAITRAQSLVAVVGDPIALCSIGRCRKFWERFI 1057
Score = 43 (20.2 bits), Expect = 3.6e-08, Sum P(2) = 3.6e-08
Identities = 8/17 (47%), Positives = 12/17 (70%)
Query: 1687 IGNPLVLVSLGDNCPKF 1703
+G+P+ L S+G C KF
Sbjct: 1037 VGDPIALCSIG-RCRKF 1052
Score = 42 (19.8 bits), Expect = 6.7e-06, Sum P(5) = 6.7e-06
Identities = 12/35 (34%), Positives = 16/35 (45%)
Query: 822 LVQVRQLDDSLAQAMQVASSPEEWKSRGIKLFYEN 856
L Q ++L D Q+ SSPE W + Y N
Sbjct: 1771 LGQCKELQDHSNQSSFNYSSPELWVNSSSSAPYPN 1805
Score = 38 (18.4 bits), Expect = 6.7e-06, Sum P(5) = 6.7e-06
Identities = 7/17 (41%), Positives = 13/17 (76%)
Query: 356 SVSASSSHIIKQFKVEG 372
+VSASS H +++++ G
Sbjct: 1726 AVSASSLHSLEEYEPRG 1742
Score = 38 (18.4 bits), Expect = 6.7e-06, Sum P(5) = 6.7e-06
Identities = 8/27 (29%), Positives = 15/27 (55%)
Query: 1122 KQFTEKKELFEKAKSLAKSNSNQFYEF 1148
K+ ++ LF++ + S SN FY +
Sbjct: 1903 KKNSDPLSLFQELSLGSSSGSNGFYSY 1929
>UNIPROTKB|Q5ZKG3 [details] [associations]
symbol:DNA2 "DNA replication ATP-dependent
helicase/nuclease DNA2" species:9031 "Gallus gallus" [GO:0005524
"ATP binding" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0051539 "4 iron, 4 sulfur cluster binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0032508 "DNA
duplex unwinding" evidence=ISS] [GO:0000076 "DNA replication
checkpoint" evidence=ISS] [GO:0000729 "DNA double-strand break
processing" evidence=ISS] [GO:0006260 "DNA replication"
evidence=ISS] [GO:0033567 "DNA replication, Okazaki fragment
processing" evidence=ISS] [GO:0003677 "DNA binding" evidence=ISS]
[GO:0003678 "DNA helicase activity" evidence=ISS] [GO:0004518
"nuclease activity" evidence=ISS] [GO:0043139 "5'-3' DNA helicase
activity" evidence=ISS] [GO:0043142 "single-stranded DNA-dependent
ATPase activity" evidence=ISS] [GO:0017108 "5'-flap endonuclease
activity" evidence=ISS] [GO:0045740 "positive regulation of DNA
replication" evidence=ISS] [GO:0006264 "mitochondrial DNA
replication" evidence=ISS] [GO:0043137 "DNA replication, removal of
RNA primer" evidence=ISS] [GO:0006284 "base-excision repair"
evidence=ISS] [GO:0016890 "site-specific endodeoxyribonuclease
activity, specific for altered base" evidence=ISS] [GO:0005760
"gamma DNA polymerase complex" evidence=ISS] InterPro:IPR026851
InterPro:IPR014808 Pfam:PF08696 GO:GO:0005739 GO:GO:0005524
GO:GO:0005634 GO:GO:0046872 GO:GO:0006284 GO:GO:0003677
GO:GO:0051539 GO:GO:0016890 eggNOG:COG1112 GO:GO:0045740
GO:GO:0000729 GO:GO:0017108 GO:GO:0000076 GO:GO:0043137
GO:GO:0043139 GO:GO:0043142 GO:GO:0006264 PANTHER:PTHR10887:SF14
EMBL:AJ720121 EMBL:AADN02028013 IPI:IPI00596013
RefSeq:NP_001006497.1 UniGene:Gga.42409 STRING:Q5ZKG3 GeneID:423688
KEGG:gga:423688 CTD:1763 HOGENOM:HOG000168456 HOVERGEN:HBG081456
KO:K10742 NextBio:20826122 Uniprot:Q5ZKG3
Length = 992
Score = 167 (63.8 bits), Expect = 5.6e-08, P = 5.6e-08
Identities = 71/249 (28%), Positives = 109/249 (43%)
Query: 2 EQLKFVVIDEAAQLKESESAIPLQLPCIQHAILVGDEVQLPAMVESSVSGEAYFGRSLFE 61
+Q F ++DEA+Q+ + PL C + +LVGD QLP +V++S + + SLF+
Sbjct: 723 KQFDFCIVDEASQISQPICLGPLF--CSKRFVLVGDHQQLPPLVQNSEARDLGMSESLFK 780
Query: 62 RLSYLGHPKHLLSMQYRMHPSISFFPNSYFYENKIRDAPTVRKRSYEKRFLPGPMYGPYS 121
RL + L++QYRM+ I N YE K+ K S LP
Sbjct: 781 RLEQNQNAVVQLTVQYRMNSKIMSLSNKLVYEGKLECGS--EKVSNATANLP-------- 830
Query: 122 FINVFGGREEFIEHSCRNMVEVSVVMK--ILRNLYKAWVESKEKLSIGIVSPYSAQVIAI 179
N+ + EF + S + EV K N KA + IGI+SPY Q+ I
Sbjct: 831 --NLKMLKLEFADASKTWLKEVLEPDKPVCFLNTEKAGCRPSD---IGIISPYRHQLKVI 885
Query: 180 QEKLGSKYEKIAGFAVKVKSIDGFQGGEEDIIIISTVRSNNTGSIGFASTPQRINVALTR 239
+ + E + G + II+ SN+ +R+NVA+TR
Sbjct: 886 TDLMARLKENRVEVNT-IDKYQGRD--KSIIIVSFVRNSNDENLGALLKDWRRLNVAITR 942
Query: 240 ARHCLWILG 248
A+H L ++G
Sbjct: 943 AKHKLIMVG 951
>UNIPROTKB|F1NNW1 [details] [associations]
symbol:MOV10 "Putative helicase MOV-10" species:9031
"Gallus gallus" [GO:0000932 "cytoplasmic mRNA processing body"
evidence=IEA] [GO:0035279 "mRNA cleavage involved in gene silencing
by miRNA" evidence=IEA] GO:GO:0000932 GO:GO:0035279
InterPro:IPR026122 PANTHER:PTHR10887:SF17
GeneTree:ENSGT00550000074391 OMA:VRFFKLD IPI:IPI00594294
EMBL:AADN02045008 Ensembl:ENSGALT00000002368 Uniprot:F1NNW1
Length = 735
Score = 165 (63.1 bits), Expect = 6.1e-08, P = 6.1e-08
Identities = 55/162 (33%), Positives = 81/162 (50%)
Query: 119 PYSFINVFGGRE-EFIEHSCRNMVEVSVVMKILRNLYKAW----VESKEKLSIGIVSPYS 173
P F V G E E S N E+ VV++ L+ L ++ + IGI+SPY
Sbjct: 540 PIIFHGVCGEDEREAKSPSFFNTAEIEVVVQYLQKLLQSQGRRGCPTISPKEIGIISPYR 599
Query: 174 AQVIAIQEKLGSKYEKIAGFA----VKVKSIDGFQGGEEDIIIISTVRS-------NNTG 222
QV I+ + SK + +KV S++ FQG E +I+ISTVRS + T
Sbjct: 600 KQVEKIRLAITSKDPVLRALPDIGQLKVGSVEEFQGQERRVILISTVRSCSEYLQLDQTF 659
Query: 223 SIGFASTPQRINVALTRARHCLWILGSERTLNHSESVWESLL 264
+GF P+R+NVALTRA+ L ++G+ L+ + W L
Sbjct: 660 RLGFLKNPKRLNVALTRAKALLIVVGNAAVLS-KDPHWHRFL 700
>RGD|1304735 [details] [associations]
symbol:Mov10l1 "Mov10l1, Moloney leukemia virus 10-like 1,
homolog (mouse)" species:10116 "Rattus norvegicus" [GO:0007281
"germ cell development" evidence=ISO] [GO:0007283 "spermatogenesis"
evidence=ISO] [GO:0007517 "muscle organ development" evidence=ISO]
[GO:0008283 "cell proliferation" evidence=ISO] [GO:0045786
"negative regulation of cell cycle" evidence=ISO] RGD:1304735
GeneTree:ENSGT00550000074391 InterPro:IPR026125
PANTHER:PTHR10887:SF6 IPI:IPI00560261 Ensembl:ENSRNOT00000050620
ArrayExpress:F1M357 Uniprot:F1M357
Length = 550
Score = 163 (62.4 bits), Expect = 6.4e-08, P = 6.4e-08
Identities = 77/253 (30%), Positives = 116/253 (45%)
Query: 33 ILVGDEVQLPAMVESSVSGEAYFGRSLFERL----SYL---------GHPKHLLSMQ--- 76
+L GD +QL +++S ++ S+ ERL +YL G LL +
Sbjct: 276 VLAGDPMQLGPVIKSRLAMAYGLNVSMLERLMSRPAYLRDENAFGACGAYNPLLVTKLVK 335
Query: 77 -YRMHPSISFFPNSYFYENKIR---DAPTVRKR-SYEKRFLPGPMYGPYSFINVFGGR-E 130
YR H ++ P+ FY ++ D V +EK LP + P F V G
Sbjct: 336 NYRSHSALLALPSRLFYHRELEVCADPKVVTSLLGWEK--LPRKGF-PLIFHGVRGNEAR 392
Query: 131 EFIEHSCRNMVEVSVVMK----ILRNLYKAWVESKEKLSIGIVSPYSAQVIAIQEKLGSK 186
E S + E VM+ + RN+ + V SK+ IG+++PY QV EK+
Sbjct: 393 EGRSPSWFSPAEAVQVMRYCCLLARNV-SSQVSSKD---IGVITPYRKQV----EKIKIL 444
Query: 187 YEKIAGFAVKVKSIDGFQGGEEDIIIISTVRSNNTGS------IGFASTPQRINVALTRA 240
+ +KV S++ FQG E +I+ISTVRSN +GF S +R NVA+TR
Sbjct: 445 LRNVDLTDIKVGSVEEFQGQEYLVIVISTVRSNEDRFEDDRYFLGFLSNSKRFNVAITRP 504
Query: 241 RHCLWILGSERTL 253
+ L +LG+ L
Sbjct: 505 KALLIVLGNPHVL 517
>UNIPROTKB|Q5ZKD7 [details] [associations]
symbol:MOV10 "Putative helicase MOV-10" species:9031
"Gallus gallus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0035279 "mRNA cleavage involved in gene silencing
by miRNA" evidence=ISS] [GO:0000932 "cytoplasmic mRNA processing
body" evidence=ISS] GO:GO:0005524 GO:GO:0003723 GO:GO:0004386
GO:GO:0000932 GO:GO:0035279 eggNOG:COG1112 InterPro:IPR026122
PANTHER:PTHR10887:SF17 HOGENOM:HOG000239755 OrthoDB:EOG4SXNC4
CTD:4343 EMBL:AJ720147 IPI:IPI00594294 RefSeq:NP_001012861.1
UniGene:Gga.1182 ProteinModelPortal:Q5ZKD7 STRING:Q5ZKD7
PRIDE:Q5ZKD7 GeneID:419872 KEGG:gga:419872 InParanoid:Q5ZKD7
NextBio:20822865 Uniprot:Q5ZKD7
Length = 967
Score = 165 (63.1 bits), Expect = 8.9e-08, P = 8.9e-08
Identities = 55/162 (33%), Positives = 81/162 (50%)
Query: 119 PYSFINVFGGRE-EFIEHSCRNMVEVSVVMKILRNLYKAW----VESKEKLSIGIVSPYS 173
P F V G E E S N E+ VV++ L+ L ++ + IGI+SPY
Sbjct: 772 PIIFHGVCGEDEREAKSPSFFNTAEIEVVVQYLQKLLQSQGRRGCPTISPKEIGIISPYR 831
Query: 174 AQVIAIQEKLGSKYEKIAGFA----VKVKSIDGFQGGEEDIIIISTVRS-------NNTG 222
QV I+ + SK + +KV S++ FQG E +I+ISTVRS + T
Sbjct: 832 KQVEKIRLAITSKDPVLRALPDIGQLKVGSVEEFQGQERRVILISTVRSCSEYLQLDQTF 891
Query: 223 SIGFASTPQRINVALTRARHCLWILGSERTLNHSESVWESLL 264
+GF P+R+NVALTRA+ L ++G+ L+ + W L
Sbjct: 892 RLGFLKNPKRLNVALTRAKALLIVVGNAAVLS-KDPHWHRFL 932
Score = 158 (60.7 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 68/214 (31%), Positives = 99/214 (46%)
Query: 33 ILVGDEVQLPAMVESSVSGEAYFGRSLFERLS-----YL----GH-PKHLLSM--QYRMH 80
+L GD QL + S ++ + G SL ERL Y G+ P+ + + YR H
Sbjct: 671 VLAGDPQQLGPVPRSPLAAQHGLGTSLLERLMLHNALYAKSDEGYNPQFVTKLLWNYRSH 730
Query: 81 PSISFFPNSYFYENKIR----DAPTVRKRSYEKRFLPGPMYGPYSFINVFGGRE-EFIEH 135
+I PN FY+++++ P VR LP P F V G E E
Sbjct: 731 KAILKVPNELFYDSELKAYEGSEPDVRNFYCTWEELPNRGV-PIIFHGVCGEDEREAKSP 789
Query: 136 SCRNMVEVSVVMKILRNLYKAW-------VESKEKLSIGIVSPYSAQVIAIQEKLGSKYE 188
S N E+ VV++ L+ L ++ + KE IGI+SPY QV I+ + SK
Sbjct: 790 SFFNTAEIEVVVQYLQKLLQSQGRRGCPTISPKE---IGIISPYRKQVEKIRLAITSKDP 846
Query: 189 KIAGFA----VKVKSIDGFQGGEEDIIIISTVRS 218
+ +KV S++ FQG E +I+ISTVRS
Sbjct: 847 VLRALPDIGQLKVGSVEEFQGQERRVILISTVRS 880
Score = 39 (18.8 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 12/35 (34%), Positives = 18/35 (51%)
Query: 787 KQLYVAITRTRQRLWIWENMEEFSKPMFDYWKKRL 821
K+L VA+TR + L + N SK +W + L
Sbjct: 900 KRLNVALTRAKALLIVVGNAAVLSKD--PHWHRFL 932
>RGD|1598327 [details] [associations]
symbol:Mov10 "Moloney leukemia virus 10" species:10116 "Rattus
norvegicus" [GO:0000932 "cytoplasmic mRNA processing body"
evidence=IEA;ISO] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0035279 "mRNA cleavage involved in gene silencing
by miRNA" evidence=IEA;ISO] InterPro:IPR003593 SMART:SM00382
RGD:1598327 GO:GO:0005524 GO:GO:0017111 GO:GO:0000932 GO:GO:0035279
InterPro:IPR026122 PANTHER:PTHR10887:SF17
GeneTree:ENSGT00550000074391 EMBL:CH474015 OrthoDB:EOG4SXNC4
CTD:4343 IPI:IPI00192859 RefSeq:NP_001101181.1 UniGene:Rn.3508
Ensembl:ENSRNOT00000018061 GeneID:310756 KEGG:rno:310756
UCSC:RGD:1598327 NextBio:662562 Uniprot:D3ZUC2
Length = 1004
Score = 175 (66.7 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07
Identities = 66/211 (31%), Positives = 102/211 (48%)
Query: 33 ILVGDEVQLPAMVESSVSGEAYFGRSLFERL-SYL--------GH-PKHLLSM--QYRMH 80
+L GD QL ++ S ++ + G SL ERL +Y G+ P+ + + YR H
Sbjct: 677 VLAGDPRQLGPVLRSPLAQKHGLGYSLLERLLTYNSLYKKGPNGYDPQFITKLLRNYRSH 736
Query: 81 PSISFFPNSYFYENKIRDAPTVRKRSYEKRFLPGPMYG-PYSFINVFGGRE-EFIEHSCR 138
P+I PN +Y+ +++ V R R+ P G P F V G E E S
Sbjct: 737 PTILDIPNQLYYDGELQACADVVDRERFCRWEGLPQQGFPIIFHGVMGKDEREGNSPSFF 796
Query: 139 NMVEVSVVMKILRNLYK-AWVESKEKLS---IGIVSPYSAQVIAIQEKLGSKYEKIAGFA 194
N E + V LR L + + K +LS +G++SPY QV I+ + ++ G
Sbjct: 797 NPEEAATVTSYLRQLLAPSSKKGKARLSPRSVGVISPYRKQVEKIRYCITKLDRELRGLD 856
Query: 195 ----VKVKSIDGFQGGEEDIIIISTVRSNNT 221
+KV S++ FQG E +I+ISTVRS+ +
Sbjct: 857 DIKDLKVGSVEEFQGQERSVILISTVRSSQS 887
Score = 171 (65.3 bits), Expect = 9.1e-08, Sum P(3) = 9.1e-08
Identities = 55/166 (33%), Positives = 84/166 (50%)
Query: 119 PYSFINVFGGRE-EFIEHSCRNMVEVSVVMKILRNLYK-AWVESKEKLS---IGIVSPYS 173
P F V G E E S N E + V LR L + + K +LS +G++SPY
Sbjct: 776 PIIFHGVMGKDEREGNSPSFFNPEEAATVTSYLRQLLAPSSKKGKARLSPRSVGVISPYR 835
Query: 174 AQVIAIQEKLGSKYEKIAGFA----VKVKSIDGFQGGEEDIIIISTVRSNNTG------- 222
QV I+ + ++ G +KV S++ FQG E +I+ISTVRS+ +
Sbjct: 836 KQVEKIRYCITKLDRELRGLDDIKDLKVGSVEEFQGQERSVILISTVRSSQSFVQLDLDF 895
Query: 223 SIGFASTPQRINVALTRARHCLWILGSERTLNHSESVWESLLDDAK 268
++GF P+R NVA+TRA+ L ++G+ L H W++ L+ K
Sbjct: 896 NLGFLKNPKRFNVAVTRAKALLIVVGNPLLLGHDPD-WKTFLEFCK 940
Score = 56 (24.8 bits), Expect = 9.1e-08, Sum P(3) = 9.1e-08
Identities = 20/71 (28%), Positives = 33/71 (46%)
Query: 1 MEQLKFVVIDEAAQLKESESAIPLQ-LPCIQHA-------ILVGDEVQLPAMVESSVSGE 52
++ + IDEA E ES + + L ++ +L GD QL ++ S ++ +
Sbjct: 637 IDHFTHIFIDEAGHCMEPESLVAIAGLMDVKETGNPGGQLVLAGDPRQLGPVLRSPLAQK 696
Query: 53 AYFGRSLFERL 63
G SL ERL
Sbjct: 697 HGLGYSLLERL 707
Score = 42 (19.8 bits), Expect = 9.1e-08, Sum P(3) = 9.1e-08
Identities = 13/44 (29%), Positives = 17/44 (38%)
Query: 1469 LDENSPWKEFFESLSWNMGSESCQESASYD---NSDELKAVSHI 1509
L + WK F E N G C A D D L+ +S +
Sbjct: 926 LGHDPDWKTFLEFCKENGGYTGCPFPAKLDLQQGQDLLQGLSKL 969
>UNIPROTKB|E1BZJ8 [details] [associations]
symbol:MOV10L1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0007281 "germ cell development" evidence=IEA]
[GO:0007283 "spermatogenesis" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
GeneTree:ENSGT00550000074391 OMA:NMSGVTL InterPro:IPR026125
PANTHER:PTHR10887:SF6 EMBL:AADN02050039 EMBL:AADN02050037
EMBL:AADN02050038 IPI:IPI00585215 Ensembl:ENSGALT00000013959
ArrayExpress:E1BZJ8 Uniprot:E1BZJ8
Length = 1192
Score = 165 (63.1 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 77/276 (27%), Positives = 127/276 (46%)
Query: 23 PLQL-PCIQHAILVGDEVQLPAMVESSVSGEAYF-GRSLFERL-SYLGHPKHLLSM--QY 77
P QL P I+ I V + + +++E +S + Y F SY +P + + Y
Sbjct: 923 PKQLGPLIKSRIAVAFGLNI-SLLERLISRDMYLRDEDAFSADGSY--NPLLITKLVNNY 979
Query: 78 RMHPSISFFPNSYFYENKIR---DAPTVRKRSYEKRFLPGPMYGPYSFINVFGGREEFIE 134
R H ++ P+ FY ++ D V + ++ LP + P F V G+E
Sbjct: 980 RSHSALLALPSKLFYHKELEVCADTSVVSSLLHWEK-LPRKGF-PLIFHGV-RGKETREG 1036
Query: 135 HSCR--NMVEVSVVMKILRNLYKAWVESKEKLSIGIVSPYSAQVIAIQEKLGSKYEKIAG 192
HS N E VM+ +L K + IG+++PY QV EK+ I
Sbjct: 1037 HSPSWFNPTEAVQVMQYCCHLAKNESIAVSVTDIGVITPYRKQV----EKIKFLLRSIDL 1092
Query: 193 FAVKVKSIDGFQGGEEDIIIISTVRS-NNTGS-----IGFASTPQRINVALTRARHCLWI 246
+KV +++ FQG E + I+STVRS +T + +GF S P+R NVA+TRA+ L +
Sbjct: 1093 SDIKVGTVEEFQGQECMVTILSTVRSYEDTFAEEEYCLGFLSNPKRFNVAITRAKALLIV 1152
Query: 247 LGSERTLNHSESVWESLLDDAKARQCFFNIDEDKDL 282
+G+ L + + +LL+ + + D +L
Sbjct: 1153 IGNPHLLV-KDPCFCALLEYSLMNNAYIGCDLPSEL 1187
>RGD|1307049 [details] [associations]
symbol:Helz "helicase with zinc finger" species:10116 "Rattus
norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR000571
Pfam:PF00642 PROSITE:PS50103 SMART:SM00356 RGD:1307049
GO:GO:0008270 GO:GO:0003676 CTD:9931 OrthoDB:EOG4NP72K OMA:YRVALLY
GeneTree:ENSGT00550000074391 IPI:IPI00364329 RefSeq:NP_001099318.2
ProteinModelPortal:D4ADZ6 Ensembl:ENSRNOT00000030300 GeneID:287773
KEGG:rno:287773 Uniprot:D4ADZ6
Length = 1964
Score = 189 (71.6 bits), Expect = 1.3e-07, Sum P(3) = 1.3e-07
Identities = 70/225 (31%), Positives = 110/225 (48%)
Query: 7 VVIDEAAQLKESESAIPLQLPCIQ-HAILVGDEVQLPAMVESSVSGEAYFGRSLFERLSY 65
+++DEAAQ E E+ +PL L +L GD +QL V S + E SL +RL Y
Sbjct: 792 ILLDEAAQAMECETIMPLALATKNTRIVLAGDHMQLSPFVYSEFARERNLHVSLLDRL-Y 850
Query: 66 LGHPKH-----LLSMQYRMHPSISFFPNSYFYENKIRDAPTVRKRSYEKRFLPGPMYGPY 120
+P LL YR H +I + + FYE K+ + K+ K F Y P
Sbjct: 851 EHYPAEFPCRILLCENYRSHEAIINYTSELFYEGKLMASG---KQPAHKDF-----Y-PL 901
Query: 121 SFINVFGGR-EEFIEHSCRNMVEVSVVMKILRNLYKAWVESKEKL---SIGIVSPYSAQV 176
+F G +E + N EV V++ + L + W + KL SIG+V+PY+ QV
Sbjct: 902 TFFTARGEDVQEKNSTAFYNNAEVFEVVERVEELRRKWPVAWGKLDDGSIGVVTPYADQV 961
Query: 177 IAIQEKLGSKYEKIAGFAVKVKSIDGFQGGEEDIIIISTVRSNNT 221
I+ +L K +++ V V+ + QG + ++ +STVR+ +T
Sbjct: 962 FRIRAELRKK--RLSD--VNVERVLNVQGKQFRVLFLSTVRTRHT 1002
Score = 48 (22.0 bits), Expect = 1.3e-07, Sum P(3) = 1.3e-07
Identities = 12/43 (27%), Positives = 20/43 (46%)
Query: 225 GFASTPQRINVALTRARHCLWILGSERTL---NHSESVWESLL 264
GF S + +N A+TRA+ + ++G L WE +
Sbjct: 1027 GFLSNYKLLNTAITRAQSLVAVVGDPVALCSIGRCRKFWERFI 1069
Score = 40 (19.1 bits), Expect = 1.3e-07, Sum P(3) = 1.3e-07
Identities = 7/21 (33%), Positives = 14/21 (66%)
Query: 439 PKTWAVTSNIVRFKNLADNES 459
P++WA T++ ++N+ N S
Sbjct: 1823 PESWANTTSSAPYQNIPCNGS 1843
>UNIPROTKB|H0Y455 [details] [associations]
symbol:DNA2 "DNA replication ATP-dependent
helicase/nuclease DNA2" species:9606 "Homo sapiens" [GO:0017108
"5'-flap endonuclease activity" evidence=IEA] [GO:0033567 "DNA
replication, Okazaki fragment processing" evidence=IEA] [GO:0043142
"single-stranded DNA-dependent ATPase activity" evidence=IEA]
InterPro:IPR026851 GO:GO:0017108 GO:GO:0043142 GO:GO:0033567
PANTHER:PTHR10887:SF14 EMBL:AL136233 HGNC:HGNC:2939
ProteinModelPortal:H0Y455 PRIDE:H0Y455 Ensembl:ENST00000440722
Bgee:H0Y455 Uniprot:H0Y455
Length = 375
Score = 157 (60.3 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 43/139 (30%), Positives = 74/139 (53%)
Query: 119 PYSFINV--FGGREEFIEHSCRNMVEVSVVMKILRNLYKAWVESKEKLSIGIVSPYSAQV 176
P F+N E+ + N+ E +++ + KA + IGI++PY Q+
Sbjct: 213 PVCFLNTDKVPAPEQVEKGGVSNVTEAKLIVFLTSIFVKAGCSPSD---IGIIAPYRQQL 269
Query: 177 IAIQEKLGSKYEKIAGFAVKVKSIDGFQGGEEDIIIISTVRSNNTGSIG-FASTPQRINV 235
I + L + G V+V ++D +QG ++ I+++S VRSN G++G +R+NV
Sbjct: 270 KIINDLLA----RSIGM-VEVNTVDKYQGRDKSIVLVSFVRSNKDGTVGELLKDWRRLNV 324
Query: 236 ALTRARHCLWILGSERTLN 254
A+TRA+H L +LG +LN
Sbjct: 325 AITRAKHKLILLGCVPSLN 343
Score = 142 (55.0 bits), Expect = 8.8e-05, Sum P(2) = 8.8e-05
Identities = 64/236 (27%), Positives = 106/236 (44%)
Query: 6 FVVIDEAAQLKESESAIPLQLPCIQHAILVGDEVQLPAMVESSVSGEAYFGRSLFERLSY 65
F ++DEA+Q+ + PL + +LVGD QLP +V + + SLF+RL
Sbjct: 80 FCIVDEASQISQPICLGPLFFS--RRFVLVGDHQQLPPLVLNREARALGMSESLFKRLEQ 137
Query: 66 LGHPKHLLSMQYRMHPSISFFPNSYFYENKIR---DA---PTVRKRSYEKRFLPGPMYGP 119
L++QYRM+ I N YE K+ D + R ++ L Y
Sbjct: 138 NKSAVVQLTVQYRMNSKIMSLSNKLTYEGKLECGSDKVANAVINLRHFKDVKLELEFYAD 197
Query: 120 YSFINVFGGREEFIEHSC-RNMVEVSVVMKILRNLYKAWVESKEKL---SIGI---VSPY 172
YS G E C N +V ++ + E+K + SI + SP
Sbjct: 198 YSDNPWLMGVFEPNNPVCFLNTDKVPAPEQVEKGGVSNVTEAKLIVFLTSIFVKAGCSPS 257
Query: 173 SAQVIA-IQEKLGSKYEKIAGFA--VKVKSIDGFQGGEEDIIIISTVRSNNTGSIG 225
+IA +++L + +A V+V ++D +QG ++ I+++S VRSN G++G
Sbjct: 258 DIGIIAPYRQQLKIINDLLARSIGMVEVNTVDKYQGRDKSIVLVSFVRSNKDGTVG 313
Score = 37 (18.1 bits), Expect = 8.8e-05, Sum P(2) = 8.8e-05
Identities = 8/19 (42%), Positives = 13/19 (68%)
Query: 782 LCPELKQLYVAITRTRQRL 800
L + ++L VAITR + +L
Sbjct: 315 LLKDWRRLNVAITRAKHKL 333
>MGI|MGI:1891384 [details] [associations]
symbol:Mov10l1 "Moloney leukemia virus 10-like 1"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0007517 "muscle organ development" evidence=IDA]
[GO:0008283 "cell proliferation" evidence=IDA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0045786 "negative regulation
of cell cycle" evidence=IDA] MGI:MGI:1891384 GO:GO:0005524
GO:GO:0005737 GO:GO:0008283 GO:GO:0007283 GO:GO:0007517
GO:GO:0004386 eggNOG:COG1112 GO:GO:0045786 CTD:54456
HOVERGEN:HBG052382 KO:K13983 InterPro:IPR026125
PANTHER:PTHR10887:SF6 EMBL:AF285587 EMBL:AF340211 EMBL:AY303754
EMBL:AK084786 IPI:IPI00118099 IPI:IPI00227971 IPI:IPI00453884
RefSeq:NP_112550.2 UniGene:Mm.358791 ProteinModelPortal:Q99MV5
SMR:Q99MV5 STRING:Q99MV5 PhosphoSite:Q99MV5 PaxDb:Q99MV5
PRIDE:Q99MV5 DNASU:83456 GeneID:83456 KEGG:mmu:83456
HOGENOM:HOG000015363 InParanoid:Q99MV5 NextBio:350584
CleanEx:MM_MOV10L1 Genevestigator:Q99MV5
GermOnline:ENSMUSG00000015365 Uniprot:Q99MV5
Length = 1187
Score = 164 (62.8 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 77/252 (30%), Positives = 114/252 (45%)
Query: 33 ILVGDEVQLPAMVESSVSGEAYFGRSLFERL----SYL---------GHPKHLLSMQ--- 76
+L GD +QL +++S ++ S+ ERL +YL G LL +
Sbjct: 913 VLAGDPMQLGPVIKSRLAMAYGLNVSMLERLMSRPAYLRDENAFGACGAYNPLLVTKLVK 972
Query: 77 -YRMHPSISFFPNSYFYENKIR---DAPTVRKR-SYEKRFLPGPMYGPYSFINVFGGR-E 130
YR H ++ P+ FY ++ D V +EK LP + P F V G
Sbjct: 973 NYRSHSALLALPSRLFYHRELEVCADPKVVTSLLGWEK--LPRKGF-PLIFHGVRGNEAR 1029
Query: 131 EFIEHSCRNMVEVSVVMK---ILRNLYKAWVESKEKLSIGIVSPYSAQVIAIQEKLGSKY 187
E S + E VM+ +L + V SK+ IG+++PY QV EK+
Sbjct: 1030 EGRSPSWFSPAEAVQVMRYCCLLARSVSSQVSSKD---IGVITPYRKQV----EKIKILL 1082
Query: 188 EKIAGFAVKVKSIDGFQGGEEDIIIISTVRSNNTGS------IGFASTPQRINVALTRAR 241
+ +KV S++ FQG E +I+ISTVRSN +GF S +R NVA+TR +
Sbjct: 1083 RNVDLTDIKVGSVEEFQGQEYLVIVISTVRSNEDRFEDDRYFLGFLSNSKRFNVAITRPK 1142
Query: 242 HCLWILGSERTL 253
L ILG+ L
Sbjct: 1143 ALLIILGNPHVL 1154
>UNIPROTKB|Q0V8H6 [details] [associations]
symbol:MOV10 "Putative helicase MOV-10" species:9913 "Bos
taurus" [GO:0000932 "cytoplasmic mRNA processing body"
evidence=ISS] [GO:0035279 "mRNA cleavage involved in gene silencing
by miRNA" evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] GO:GO:0005524 GO:GO:0003723 GO:GO:0004386
GO:GO:0000932 GO:GO:0035279 eggNOG:COG1112 InterPro:IPR026122
PANTHER:PTHR10887:SF17 GeneTree:ENSGT00550000074391
HOGENOM:HOG000239755 OrthoDB:EOG4SXNC4 EMBL:BT026242 EMBL:BC148151
IPI:IPI00691419 RefSeq:NP_001069307.1 UniGene:Bt.2939
ProteinModelPortal:Q0V8H6 STRING:Q0V8H6 Ensembl:ENSBTAT00000018997
GeneID:523206 KEGG:bta:523206 CTD:4343 InParanoid:Q0V8H6
OMA:VRFFKLD NextBio:20873687 Uniprot:Q0V8H6
Length = 1003
Score = 166 (63.5 bits), Expect = 1.9e-07, Sum P(3) = 1.9e-07
Identities = 54/166 (32%), Positives = 84/166 (50%)
Query: 119 PYSFINVFGGRE-EFIEHSCRNMVEVSVVMKILRNLYK-AWVESKEKLS---IGIVSPYS 173
P F V G E E S N E + V L+ L + + K +LS +G++SPY
Sbjct: 775 PIIFHGVMGKDEREGNSPSFFNPEEAATVTSYLKQLLAPSSKKGKARLSPRSVGVISPYR 834
Query: 174 AQVIAIQEKLGSKYEKIAGFA----VKVKSIDGFQGGEEDIIIISTVRSNNTG------- 222
QV I+ + +++ G +KV S++ FQG E +I+ISTVRS+ +
Sbjct: 835 KQVEKIRYCITKLDKQLRGLDDIKDLKVGSVEEFQGQERSVILISTVRSSQSFVQLDLDF 894
Query: 223 SIGFASTPQRINVALTRARHCLWILGSERTLNHSESVWESLLDDAK 268
++GF P+R NVA+TRA+ L ++G+ L H W+ L+ K
Sbjct: 895 NLGFLKNPKRFNVAVTRAKALLIVVGNPLLLGHDPD-WKVFLEFCK 939
Score = 161 (61.7 bits), Expect = 2.0e-06, Sum P(2) = 2.0e-06
Identities = 70/244 (28%), Positives = 113/244 (46%)
Query: 1 MEQLKFVVIDEAAQLKESESAIPLQLPCIQHAILVGDEVQLPAMVESSVSGEAYFGRSLF 60
ME V I ++KE+++ P Q +L GD QL ++ ++ + G SL
Sbjct: 651 MEPESLVAIAGLMEVKEADN------PGGQ-LVLAGDPRQLGPVLRCPLTQKHGLGYSLL 703
Query: 61 ERLSYLG----------HPKHLLSM--QYRMHPSISFFPNSYFYENKIRDAPTV--RKRS 106
ERL +P+ + + YR HP+I PN +Y+ +++ V R+R
Sbjct: 704 ERLLTFNALYKKGPDGYNPQFITKLLRNYRSHPTILDVPNRLYYDGELQACADVVDRERF 763
Query: 107 YEKRFLPGPMYGPYSFINVFGGRE-EFIEHSCRNMVEVSVVMKILRNLYK-AWVESKEKL 164
LP + P F V G E E S N E + V L+ L + + K +L
Sbjct: 764 CRWEGLPRQDF-PIIFHGVMGKDEREGNSPSFFNPEEAATVTSYLKQLLAPSSKKGKARL 822
Query: 165 S---IGIVSPYSAQVIAIQEKLGSKYEKIAGFA----VKVKSIDGFQGGEEDIIIISTVR 217
S +G++SPY QV I+ + +++ G +KV S++ FQG E +I+ISTVR
Sbjct: 823 SPRSVGVISPYRKQVEKIRYCITKLDKQLRGLDDIKDLKVGSVEEFQGQERSVILISTVR 882
Query: 218 SNNT 221
S+ +
Sbjct: 883 SSQS 886
Score = 54 (24.1 bits), Expect = 1.9e-07, Sum P(3) = 1.9e-07
Identities = 20/71 (28%), Positives = 33/71 (46%)
Query: 1 MEQLKFVVIDEAAQLKESESAIPLQ-LPCIQHA-------ILVGDEVQLPAMVESSVSGE 52
++ + IDEA E ES + + L ++ A +L GD QL ++ ++ +
Sbjct: 636 IDHFTHIFIDEAGHAMEPESLVAIAGLMEVKEADNPGGQLVLAGDPRQLGPVLRCPLTQK 695
Query: 53 AYFGRSLFERL 63
G SL ERL
Sbjct: 696 HGLGYSLLERL 706
Score = 46 (21.3 bits), Expect = 1.9e-07, Sum P(3) = 1.9e-07
Identities = 14/32 (43%), Positives = 18/32 (56%)
Query: 485 LMKFYPLSSGIVSH--LLSDRDGRE-LDLPFE 513
L K P +SG+ SH L +R+G E L L E
Sbjct: 965 LSKLSPSTSGLKSHDYLPQEREGEEGLSLQVE 996
Score = 40 (19.1 bits), Expect = 7.4e-07, Sum P(3) = 7.4e-07
Identities = 10/30 (33%), Positives = 11/30 (36%)
Query: 1469 LDENSPWKEFFESLSWNMGSESCQESASYD 1498
L + WK F E N G C A D
Sbjct: 925 LGHDPDWKVFLEFCKENGGYTGCPFPAKLD 954
>ZFIN|ZDB-GENE-040426-1189 [details] [associations]
symbol:aqr "aquarius homolog (mouse)" species:7955
"Danio rerio" [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IEA] [GO:0097157 "pre-mRNA intronic binding" evidence=IEA]
[GO:0005681 "spliceosomal complex" evidence=IEA] InterPro:IPR024860
InterPro:IPR026300 PIRSF:PIRSF038901 ZFIN:ZDB-GENE-040426-1189
GO:GO:0005681 GO:GO:0000398 CTD:9716 HOGENOM:HOG000170551
HOVERGEN:HBG080430 KO:K12874 GO:GO:0097157 PANTHER:PTHR10887:SF5
EMBL:BC160661 IPI:IPI00861759 RefSeq:NP_956758.2 UniGene:Dr.17308
ProteinModelPortal:B1H1M2 DNASU:393436 GeneID:393436
KEGG:dre:393436 eggNOG:NOG272077 NextBio:20814473
ArrayExpress:B1H1M2 Uniprot:B1H1M2
Length = 1525
Score = 164 (62.8 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 78/260 (30%), Positives = 131/260 (50%)
Query: 7 VVIDEAAQLKESESAIPLQL--P-----CIQHAILVGDEVQLPAMVESSVSGEAYFG--R 57
++++EAAQ+ E E+ IPL L P ++ I++GD QLP ++++ ++ + Y +
Sbjct: 1058 ILMEEAAQILEIETFIPLLLQNPEDGYSRLKRWIMIGDHHQLPPVIKN-MAFQKYSNMEQ 1116
Query: 58 SLFERLSYLGHPKHLLSMQYRMHPSISFFPNSYFYENK-IRDAPTVRKRSYEKRFLPGPM 116
SLF R LG P L Q R S+ N Y + K + + P V+ + + PG
Sbjct: 1117 SLFTRFVRLGVPTVDLDAQGRARASLC---NLYNWRYKQLGNLPHVQLQPEFRTPNPGFT 1173
Query: 117 YGPYSFINV--FGG--REEFIEHSCRNMVEV--SVVMKILRNL--YKAWVESKEKLSIGI 168
+ + INV F G E + +N+ E SV + + L Y A E++SI
Sbjct: 1174 FD-FQLINVEDFNGVGESEPNPYFYQNLAEAEYSVALYMYMRLLGYPA-----ERISI-- 1225
Query: 169 VSPYSAQVIAIQEKLGSKYEKIAGFAV--KVKSIDGFQGGEEDIIIISTVRSNNTGSIGF 226
++ Y+ Q I++ + + + F KV ++D FQG + D II+S VR T ++G
Sbjct: 1226 LTTYNGQKHLIRDVIHQRCASNSFFGQPSKVTTVDRFQGQQNDYIILSLVR---TKAVGH 1282
Query: 227 ASTPQRINVALTRARHCLWI 246
+R+ VA++RAR L+I
Sbjct: 1283 LRDVRRLVVAMSRARLGLYI 1302
>RGD|1306223 [details] [associations]
symbol:Aqr "aquarius homolog (mouse)" species:10116 "Rattus
norvegicus" [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IEA] [GO:0005681 "spliceosomal complex" evidence=IEA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=ISO]
[GO:0097157 "pre-mRNA intronic binding" evidence=IEA]
InterPro:IPR024860 InterPro:IPR026300 PIRSF:PIRSF038901 RGD:1306223
GO:GO:0005681 GO:GO:0000398 GO:GO:0097157 PANTHER:PTHR10887:SF5
IPI:IPI00389267 ProteinModelPortal:D3ZZP0
Ensembl:ENSRNOT00000011917 UCSC:RGD:1306223 ArrayExpress:D3ZZP0
Uniprot:D3ZZP0
Length = 1353
Score = 163 (62.4 bits), Expect = 2.2e-07, P = 2.2e-07
Identities = 74/256 (28%), Positives = 128/256 (50%)
Query: 7 VVIDEAAQLKESESAIPLQLPCIQHA-------ILVGDEVQLPAMVESSVSGEAYFG--R 57
++++EAAQ+ E E+ IPL L Q I++GD QLP ++++ ++ + Y +
Sbjct: 1059 ILMEEAAQILEIETFIPLLLQNPQDGFSRLKRWIMIGDHHQLPPVIKN-MAFQKYSNMEQ 1117
Query: 58 SLFERLSYLGHPKHLLSMQYRMHPSISFFPNSYFYENKIRDAPTVRKRSYEKRFLPGPMY 117
SLF R +G P L Q R S+ N + Y+N + + P V+ G +Y
Sbjct: 1118 SLFTRFVRVGVPTVDLDAQGRARASLCNLYN-WRYKN-LGNLPHVQLLPEFSTANAGLLY 1175
Query: 118 GPYSFINV--F-G-GREEFIEHSCRNMVEVSVVMKILRNLYKAWVE-SKEKLSIGIVSPY 172
+ INV F G G E + +N+ E V+ + +Y + +K+SI ++ Y
Sbjct: 1176 D-FQLINVEDFQGVGESEPNPYFYQNLGEAEYVVALF--MYMCLLGYPADKISI--LTTY 1230
Query: 173 SAQVIAIQEKLGSKY--EKIAGFAVKVKSIDGFQGGEEDIIIISTVRSNNTGSIGFASTP 230
+ Q I++ + + + G KV ++D FQG + D I++S VR T ++G
Sbjct: 1231 NGQKHLIRDIINRRCGNNPLIGRPNKVTTVDRFQGQQNDYILLSLVR---TRAVGHLRDV 1287
Query: 231 QRINVALTRARHCLWI 246
+R+ VA++RAR L+I
Sbjct: 1288 RRLVVAMSRARLGLYI 1303
>UNIPROTKB|F1SBP9 [details] [associations]
symbol:MOV10 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0035279 "mRNA cleavage involved in gene silencing by
miRNA" evidence=IEA] [GO:0000932 "cytoplasmic mRNA processing body"
evidence=IEA] GO:GO:0000932 GO:GO:0035279 InterPro:IPR026122
PANTHER:PTHR10887:SF17 GeneTree:ENSGT00550000074391 CTD:4343
OMA:VRFFKLD EMBL:CU861480 RefSeq:XP_003481536.1 UniGene:Ssc.19573
Ensembl:ENSSSCT00000007422 GeneID:100521086 KEGG:ssc:100521086
Uniprot:F1SBP9
Length = 1001
Score = 174 (66.3 bits), Expect = 2.8e-07, Sum P(2) = 2.8e-07
Identities = 72/243 (29%), Positives = 114/243 (46%)
Query: 1 MEQLKFVVIDEAAQLKESESAIPLQLPCIQHAILVGDEVQLPAMVESSVSGEAYFGRSLF 60
ME V I ++KE+++ P Q +L GD QL ++ ++ + G SL
Sbjct: 651 MEPESLVAIAGLLEVKEADN------PGGQ-LVLAGDPRQLGPVLRCPLTQKHGLGYSLL 703
Query: 61 ERL-SYLG---------HPKHLLSM--QYRMHPSISFFPNSYFYENKIRDAPTVRKRSYE 108
ERL +Y +P+ + + YR HP+I PN +YE +++ V R
Sbjct: 704 ERLLTYNALYKKGPDGYNPQFITKLLRNYRSHPTILDIPNQLYYEGELQACADVVDRERF 763
Query: 109 KRFLPGPMYG-PYSFINVFGGRE-EFIEHSCRNMVEVSVVMKILRNLY-KAWVESKEKLS 165
R+ P G P F V G E E S N E + V L+ L + + K +LS
Sbjct: 764 CRWEGLPRQGFPIIFHGVMGKDEREGNSPSFFNPEEAATVTSYLKQLLTSSSKKGKARLS 823
Query: 166 ---IGIVSPYSAQVIAIQEKLGSKYEKIAGFA----VKVKSIDGFQGGEEDIIIISTVRS 218
+G++SPY QV I+ + +++ G +KV S++ FQG E +I+ISTVRS
Sbjct: 824 PRSVGVISPYRKQVEKIRHCITKLDKELRGLDDIKDLKVGSVEEFQGQERSVILISTVRS 883
Query: 219 NNT 221
+ +
Sbjct: 884 SQS 886
Score = 172 (65.6 bits), Expect = 2.2e-07, Sum P(3) = 2.2e-07
Identities = 54/166 (32%), Positives = 85/166 (51%)
Query: 119 PYSFINVFGGRE-EFIEHSCRNMVEVSVVMKILRNLY-KAWVESKEKLS---IGIVSPYS 173
P F V G E E S N E + V L+ L + + K +LS +G++SPY
Sbjct: 775 PIIFHGVMGKDEREGNSPSFFNPEEAATVTSYLKQLLTSSSKKGKARLSPRSVGVISPYR 834
Query: 174 AQVIAIQEKLGSKYEKIAGFA----VKVKSIDGFQGGEEDIIIISTVRSNNTG------- 222
QV I+ + +++ G +KV S++ FQG E +I+ISTVRS+ +
Sbjct: 835 KQVEKIRHCITKLDKELRGLDDIKDLKVGSVEEFQGQERSVILISTVRSSQSFVQLDLDF 894
Query: 223 SIGFASTPQRINVALTRARHCLWILGSERTLNHSESVWESLLDDAK 268
++GF P+R NVA+TRA+ L ++G+ L H W++ L+ K
Sbjct: 895 NLGFLKNPKRFNVAVTRAKALLIVVGNPLLLGHDPD-WKAFLEFCK 939
Score = 52 (23.4 bits), Expect = 2.2e-07, Sum P(3) = 2.2e-07
Identities = 20/71 (28%), Positives = 33/71 (46%)
Query: 1 MEQLKFVVIDEAAQLKESESAIPLQ-LPCIQHA-------ILVGDEVQLPAMVESSVSGE 52
++ + IDEA E ES + + L ++ A +L GD QL ++ ++ +
Sbjct: 636 IDHFTHIFIDEAGHSMEPESLVAIAGLLEVKEADNPGGQLVLAGDPRQLGPVLRCPLTQK 695
Query: 53 AYFGRSLFERL 63
G SL ERL
Sbjct: 696 HGLGYSLLERL 706
Score = 41 (19.5 bits), Expect = 2.2e-07, Sum P(3) = 2.2e-07
Identities = 10/30 (33%), Positives = 11/30 (36%)
Query: 1469 LDENSPWKEFFESLSWNMGSESCQESASYD 1498
L + WK F E N G C A D
Sbjct: 925 LGHDPDWKAFLEFCKENGGYTGCPFPAKLD 954
>MGI|MGI:97054 [details] [associations]
symbol:Mov10 "Moloney leukemia virus 10" species:10090 "Mus
musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0000932 "cytoplasmic mRNA processing body" evidence=ISO]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0031047 "gene silencing by RNA"
evidence=IEA] [GO:0035279 "mRNA cleavage involved in gene silencing
by miRNA" evidence=ISO] InterPro:IPR003593 SMART:SM00382
MGI:MGI:97054 GO:GO:0005524 GO:GO:0003723 GO:GO:0004386
GO:GO:0000932 GO:GO:0035279 eggNOG:COG1112 InterPro:IPR026122
PANTHER:PTHR10887:SF17 GeneTree:ENSGT00550000074391 CTD:4343
HOVERGEN:HBG052500 EMBL:X52574 EMBL:AK004542 EMBL:BC053743
EMBL:X75819 IPI:IPI00130328 PIR:A39611 RefSeq:NP_001156912.1
RefSeq:NP_001156913.1 RefSeq:NP_032645.2 UniGene:Mm.1597
ProteinModelPortal:P23249 SMR:P23249 DIP:DIP-48575N STRING:P23249
PhosphoSite:P23249 PaxDb:P23249 PRIDE:P23249
Ensembl:ENSMUST00000168015 GeneID:17454 KEGG:mmu:17454
NextBio:292100 Bgee:P23249 Genevestigator:P23249
GermOnline:ENSMUSG00000002227 Uniprot:P23249
Length = 1004
Score = 170 (64.9 bits), Expect = 5.8e-07, Sum P(2) = 5.8e-07
Identities = 65/211 (30%), Positives = 102/211 (48%)
Query: 33 ILVGDEVQLPAMVESSVSGEAYFGRSLFERL-SYL--------GH-PKHLLSM--QYRMH 80
+L GD QL ++ S ++ + G SL ERL +Y G+ P+ + + YR H
Sbjct: 677 VLAGDPRQLGPVLRSPLALKHGLGYSLLERLLAYNSLYKKGPNGYDPQFITKLLRNYRSH 736
Query: 81 PSISFFPNSYFYENKIRDAPTVRKRSYEKRFLPGPMYG-PYSFINVFGGRE-EFIEHSCR 138
P+I PN +Y+ +++ V R R+ P G P F V G E E S
Sbjct: 737 PTILDIPNQLYYDGELQACADVVDRERFCRWEGLPQQGFPIIFHGVMGKDEREGNSPSFF 796
Query: 139 NMVEVSVVMKILRNLYK-AWVESKEKLS---IGIVSPYSAQVIAIQEKLGSKYEKIAGFA 194
N E + V L+ L + + K +LS +G++SPY QV I+ + ++ G
Sbjct: 797 NPEEAATVTSYLKQLLAPSSKKGKARLSPRNVGVISPYRKQVEKIRYCITKLDRELRGLD 856
Query: 195 ----VKVKSIDGFQGGEEDIIIISTVRSNNT 221
+KV S++ FQG E +I+ISTVRS+ +
Sbjct: 857 DIKDLKVGSVEEFQGQERSVILISTVRSSQS 887
Score = 168 (64.2 bits), Expect = 2.9e-07, Sum P(3) = 2.9e-07
Identities = 54/166 (32%), Positives = 84/166 (50%)
Query: 119 PYSFINVFGGRE-EFIEHSCRNMVEVSVVMKILRNLYK-AWVESKEKLS---IGIVSPYS 173
P F V G E E S N E + V L+ L + + K +LS +G++SPY
Sbjct: 776 PIIFHGVMGKDEREGNSPSFFNPEEAATVTSYLKQLLAPSSKKGKARLSPRNVGVISPYR 835
Query: 174 AQVIAIQEKLGSKYEKIAGFA----VKVKSIDGFQGGEEDIIIISTVRSNNTG------- 222
QV I+ + ++ G +KV S++ FQG E +I+ISTVRS+ +
Sbjct: 836 KQVEKIRYCITKLDRELRGLDDIKDLKVGSVEEFQGQERSVILISTVRSSQSFVQLDLDF 895
Query: 223 SIGFASTPQRINVALTRARHCLWILGSERTLNHSESVWESLLDDAK 268
++GF P+R NVA+TRA+ L ++G+ L H W++ L+ K
Sbjct: 896 NLGFLKNPKRFNVAVTRAKALLIVVGNPLLLGHDPD-WKTFLEFCK 940
Score = 54 (24.1 bits), Expect = 2.9e-07, Sum P(3) = 2.9e-07
Identities = 20/71 (28%), Positives = 33/71 (46%)
Query: 1 MEQLKFVVIDEAAQLKESESAIPLQ-LPCIQHA-------ILVGDEVQLPAMVESSVSGE 52
++ + IDEA E ES + + L ++ +L GD QL ++ S ++ +
Sbjct: 637 IDHFTHIFIDEAGHCMEPESLVAIAGLMDVKETGNPGGQLVLAGDPRQLGPVLRSPLALK 696
Query: 53 AYFGRSLFERL 63
G SL ERL
Sbjct: 697 HGLGYSLLERL 707
Score = 42 (19.8 bits), Expect = 2.9e-07, Sum P(3) = 2.9e-07
Identities = 13/44 (29%), Positives = 17/44 (38%)
Query: 1469 LDENSPWKEFFESLSWNMGSESCQESASYD---NSDELKAVSHI 1509
L + WK F E N G C A D D L+ +S +
Sbjct: 926 LGHDPDWKTFLEFCKENGGYTGCPFPAKLDLQQGQDLLQGLSKL 969
>WB|WBGene00001016 [details] [associations]
symbol:dna-2 species:6239 "Caenorhabditis elegans"
[GO:0043142 "single-stranded DNA-dependent ATPase activity"
evidence=IEA;IDA] [GO:0017108 "5'-flap endonuclease activity"
evidence=IEA] [GO:0033567 "DNA replication, Okazaki fragment
processing" evidence=IEA] [GO:0009792 "embryo development ending in
birth or egg hatching" evidence=IMP] [GO:0005634 "nucleus"
evidence=IDA] [GO:0043141 "ATP-dependent 5'-3' DNA helicase
activity" evidence=IDA] [GO:0000014 "single-stranded DNA specific
endodeoxyribonuclease activity" evidence=IDA] [GO:0006259 "DNA
metabolic process" evidence=IDA] InterPro:IPR026851
InterPro:IPR014808 Pfam:PF08696 GO:GO:0005634 GO:GO:0009792
eggNOG:COG1112 GO:GO:0017108 GO:GO:0000014 GO:GO:0043142
GO:GO:0033567 PANTHER:PTHR10887:SF14 KO:K10742
GeneTree:ENSGT00550000074852 OMA:EHESLCH GO:GO:0043141 EMBL:Z50070
PIR:T22132 RefSeq:NP_496515.1 ProteinModelPortal:Q20371 SMR:Q20371
STRING:Q20371 PaxDb:Q20371 PRIDE:Q20371 EnsemblMetazoa:F43G6.1a
GeneID:174809 KEGG:cel:CELE_F43G6.1 UCSC:F43G6.1a CTD:174809
WormBase:F43G6.1a HOGENOM:HOG000016745 InParanoid:Q20371
NextBio:885596 ArrayExpress:Q20371 Uniprot:Q20371
Length = 1105
Score = 160 (61.4 bits), Expect = 3.6e-07, P = 3.6e-07
Identities = 80/279 (28%), Positives = 128/279 (45%)
Query: 7 VVIDEAAQLKESESAIPLQLPCIQHAILVGDEVQLPAMVESSVSGEAYFGRSLFERLSYL 66
V++DEA+ + E +P+ L +LVGD QL +V S + + G S E+L
Sbjct: 823 VIVDEASMVLEP-LLLPV-LATSNKFVLVGDCKQLTPLVVSRKAKQEGAGISTMEKLQQ- 879
Query: 67 GHPKHLLSM--QYRMHPSISFFPNSYFYENK-IRDAPTVRKRSYEKR--FLPGPMYGPYS 121
HP ++S+ QYRM+ IS + FYEN+ I +V + S ++ ++ G
Sbjct: 880 SHPGVVVSLTSQYRMNREISVLSSKLFYENRLICGNESVSRSSLDRTGDYIVAMDDGSDH 939
Query: 122 FINVFGGREEFIEHSCRNMVEVSVV-------------------MKILRNLYKAWVESKE 162
G I+ SC + S + K++ L + +V S
Sbjct: 940 IRKALSGD---IKDSCVFLDTQSTINSKMQCEDGEGGGMCNDGEAKLISELCQQFVMSGV 996
Query: 163 KL-SIGIVSPYSAQVIAIQEKLGSKYEKIAGFAVKVKSIDGFQGGEEDIIIISTVRSNN- 220
K IG++S Y QV I+ L S ++V +ID +QG E+ +II S +NN
Sbjct: 997 KPHEIGVMSAYRRQVDHIRGILNSD-------ELEVNTIDSYQGREKRVIIWSLTWTNNS 1049
Query: 221 TGSIGFASTPQRINVALTRARHCLWILGSERTLNHSESV 259
T +R+NVALTRAR L ++G + N +E++
Sbjct: 1050 TKKSELLKDERRVNVALTRARQKLVVVGCK---NSAETI 1085
>UNIPROTKB|Q9HCE1 [details] [associations]
symbol:MOV10 "Putative helicase MOV-10" species:9606 "Homo
sapiens" [GO:0003723 "RNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0000932 "cytoplasmic mRNA processing body"
evidence=IDA] [GO:0035279 "mRNA cleavage involved in gene silencing
by miRNA" evidence=IDA] [GO:0005829 "cytosol" evidence=TAS]
[GO:0007219 "Notch signaling pathway" evidence=TAS] GO:GO:0005829
GO:GO:0005524 Reactome:REACT_111102 Reactome:REACT_116125
Reactome:REACT_6900 GO:GO:0006355 GO:GO:0007219 GO:GO:0006351
GO:GO:0003723 GO:GO:0004386 GO:GO:0000932 GO:GO:0035279
eggNOG:COG1112 InterPro:IPR026122 PANTHER:PTHR10887:SF17
EMBL:AL603832 HOGENOM:HOG000239755 OrthoDB:EOG4SXNC4 CTD:4343
OMA:VRFFKLD EMBL:AB046851 EMBL:AK074174 EMBL:AL833353 EMBL:BC002548
EMBL:BC004499 EMBL:BC009312 IPI:IPI00444452 IPI:IPI00444454
IPI:IPI00929442 RefSeq:NP_001123551.1 RefSeq:NP_066014.1
UniGene:Hs.514941 ProteinModelPortal:Q9HCE1 SMR:Q9HCE1
DIP:DIP-44158N IntAct:Q9HCE1 STRING:Q9HCE1 PhosphoSite:Q9HCE1
DMDM:24638063 PaxDb:Q9HCE1 PRIDE:Q9HCE1 DNASU:4343
Ensembl:ENST00000357443 Ensembl:ENST00000369645
Ensembl:ENST00000413052 Ensembl:ENST00000544796 GeneID:4343
KEGG:hsa:4343 UCSC:uc001eck.3 GeneCards:GC01P113215 HGNC:HGNC:7200
MIM:610742 neXtProt:NX_Q9HCE1 PharmGKB:PA30908 HOVERGEN:HBG052500
InParanoid:Q9HCE1 PhylomeDB:Q9HCE1 ChiTaRS:MOV10 GenomeRNAi:4343
NextBio:17098 ArrayExpress:Q9HCE1 Bgee:Q9HCE1 CleanEx:HS_MOV10
Genevestigator:Q9HCE1 GermOnline:ENSG00000155363 Uniprot:Q9HCE1
Length = 1003
Score = 173 (66.0 bits), Expect = 4.5e-07, Sum P(2) = 4.5e-07
Identities = 66/211 (31%), Positives = 102/211 (48%)
Query: 33 ILVGDEVQLPAMVESSVSGEAYFGRSLFERL-SYL--------GH-PKHLLSM--QYRMH 80
+L GD QL ++ S ++ + G SL ERL +Y G+ P+ + + YR H
Sbjct: 676 VLAGDPRQLGPVLRSPLTQKHGLGYSLLERLLTYNSLYKKGPDGYDPQFITKLLRNYRSH 735
Query: 81 PSISFFPNSYFYENKIRDAPTVRKRSYEKRFLPGPMYG-PYSFINVFGGRE-EFIEHSCR 138
P+I PN +YE +++ V R R+ P G P F V G E E S
Sbjct: 736 PTILDIPNQLYYEGELQACADVVDRERFCRWAGLPRQGFPIIFHGVMGKDEREGNSPSFF 795
Query: 139 NMVEVSVVMKILRNLYK-AWVESKEKLS---IGIVSPYSAQVIAIQEKLGSKYEKIAGFA 194
N E + V L+ L + + K +LS +G++SPY QV I+ + ++ G
Sbjct: 796 NPEEAATVTSYLKLLLAPSSKKGKARLSPRSVGVISPYRKQVEKIRYCITKLDRELRGLD 855
Query: 195 ----VKVKSIDGFQGGEEDIIIISTVRSNNT 221
+KV S++ FQG E +I+ISTVRS+ +
Sbjct: 856 DIKDLKVGSVEEFQGQERSVILISTVRSSQS 886
Score = 163 (62.4 bits), Expect = 1.2e-06, Sum P(3) = 1.2e-06
Identities = 55/166 (33%), Positives = 83/166 (50%)
Query: 119 PYSFINVFGGRE-EFIEHSCRNMVEVSVVMKILRNLYK-AWVESKEKLS---IGIVSPYS 173
P F V G E E S N E + V L+ L + + K +LS +G++SPY
Sbjct: 775 PIIFHGVMGKDEREGNSPSFFNPEEAATVTSYLKLLLAPSSKKGKARLSPRSVGVISPYR 834
Query: 174 AQVIAIQEKLGSKYEKIAGFA----VKVKSIDGFQGGEEDIIIISTVRSNNTG------- 222
QV I+ + ++ G +KV S++ FQG E +I+ISTVRS+ +
Sbjct: 835 KQVEKIRYCITKLDRELRGLDDIKDLKVGSVEEFQGQERSVILISTVRSSQSFVQLDLDF 894
Query: 223 SIGFASTPQRINVALTRARHCLWILGSERTLNHSESVWESLLDDAK 268
++GF P+R NVA+TRA+ L I+G+ L H W+ L+ K
Sbjct: 895 NLGFLKNPKRFNVAVTRAKALLIIVGNPLLLGHDPD-WKVFLEFCK 939
Score = 55 (24.4 bits), Expect = 1.2e-06, Sum P(3) = 1.2e-06
Identities = 20/71 (28%), Positives = 33/71 (46%)
Query: 1 MEQLKFVVIDEAAQLKESESAIPLQ-LPCIQHA-------ILVGDEVQLPAMVESSVSGE 52
++ + IDEA E ES + + L ++ +L GD QL ++ S ++ +
Sbjct: 636 IDHFTHIFIDEAGHCMEPESLVAIAGLMEVKETGDPGGQLVLAGDPRQLGPVLRSPLTQK 695
Query: 53 AYFGRSLFERL 63
G SL ERL
Sbjct: 696 HGLGYSLLERL 706
Score = 40 (19.1 bits), Expect = 4.5e-07, Sum P(2) = 4.5e-07
Identities = 10/30 (33%), Positives = 11/30 (36%)
Query: 1469 LDENSPWKEFFESLSWNMGSESCQESASYD 1498
L + WK F E N G C A D
Sbjct: 925 LGHDPDWKVFLEFCKENGGYTGCPFPAKLD 954
>UNIPROTKB|F1NPB8 [details] [associations]
symbol:AQR "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000398 "mRNA splicing, via spliceosome" evidence=IEA]
[GO:0097157 "pre-mRNA intronic binding" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IEA] InterPro:IPR024860
InterPro:IPR026300 PIRSF:PIRSF038901 GO:GO:0000398 OMA:RTKAVGH
GO:GO:0071013 GO:GO:0097157 PANTHER:PTHR10887:SF5
GeneTree:ENSGT00700000104467 EMBL:AADN02003289 EMBL:AADN02003288
IPI:IPI00597734 Ensembl:ENSGALT00000015995 Uniprot:F1NPB8
Length = 1416
Score = 160 (61.4 bits), Expect = 4.9e-07, P = 4.9e-07
Identities = 70/255 (27%), Positives = 124/255 (48%)
Query: 7 VVIDEAAQLKESESAIPLQLPCIQHA-------ILVGDEVQLPAMVESSVSGEAYFG--R 57
++++E+AQ+ E E+ IPL L Q I++GD QLP ++++ ++ + Y +
Sbjct: 1068 ILMEESAQILEIETFIPLLLQNPQDGFSRLKRWIMIGDHHQLPPVIKN-MAFQKYSNMEQ 1126
Query: 58 SLFERLSYLGHPKHLLSMQYRMHPSISFFPNSYFYENKIRDAPTVRKRSYEKRFLPGPMY 117
SLF R +G P L Q R S+ N + Y+N + + P V+ + G +Y
Sbjct: 1127 SLFTRFVRVGVPTVDLDAQGRARASLCNLYN-WRYKN-LGNLPHVQLMPEFRTANAGFLY 1184
Query: 118 GPYSFINV--FGG--REEFIEHSCRNMVEVSVVMKILRNLYKAWVESKEKLSIGIVSPYS 173
+ INV F G E + +N+ E V+ + +Y + I I++ Y+
Sbjct: 1185 D-FQLINVEDFNGVGESEPNPYFYQNLGEAEYVVAVF--MYMCLLGYPAD-RISILTTYN 1240
Query: 174 AQVIAIQEKLGSKY--EKIAGFAVKVKSIDGFQGGEEDIIIISTVRSNNTGSIGFASTPQ 231
Q I++ + + + G KV ++D FQG + D I++S VR+ G + +
Sbjct: 1241 GQKHLIRDVINQRCGNNPLIGRPNKVTTVDRFQGQQNDYILLSLVRTKAVGHL--RRDVR 1298
Query: 232 RINVALTRARHCLWI 246
R+ VA++RAR L+I
Sbjct: 1299 RLVVAMSRARLGLYI 1313
>UNIPROTKB|J9P7Z9 [details] [associations]
symbol:MOV10 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 SMART:SM00382 GO:GO:0005524 GO:GO:0017111
InterPro:IPR026122 PANTHER:PTHR10887:SF17
GeneTree:ENSGT00550000074391 EMBL:AAEX03011080 EMBL:AAEX03011081
Ensembl:ENSCAFT00000044224 Uniprot:J9P7Z9
Length = 983
Score = 172 (65.6 bits), Expect = 5.4e-07, Sum P(2) = 5.4e-07
Identities = 73/244 (29%), Positives = 116/244 (47%)
Query: 1 MEQLKFVVIDEAAQLKESESAIPLQLPCIQHAILVGDEVQLPAMVESSVSGEAYFGRSLF 60
ME V I ++KE+++ P Q +L GD QL ++ S ++ + G SL
Sbjct: 631 MEPESLVAIAGLMEVKETDN------PGGQ-LVLAGDPRQLGPVLRSPLTQKHGLGYSLL 683
Query: 61 ERL-SYLG---------HPKHLLSM--QYRMHPSISFFPNSYFYENKIRDAPTV--RKRS 106
ERL +Y +P+ + + YR HP+I PN +YE +++ V R+R
Sbjct: 684 ERLLTYNALYKKGSNGYNPQFITKLLRNYRSHPTILDIPNQLYYEGELQACADVVDRERF 743
Query: 107 YEKRFLPGPMYGPYSFINVFGGRE-EFIEHSCRNMVEVSVVMKILRNLYK-AWVESKEKL 164
LP + P F V G E E S N E + V L+ L + + K +L
Sbjct: 744 CHWEGLPRQGF-PIIFHGVMGKDEREGNSPSFFNPEEAATVTSYLKLLLAPSSKKGKARL 802
Query: 165 S---IGIVSPYSAQVIAIQEKLGSKYEKIAGFA----VKVKSIDGFQGGEEDIIIISTVR 217
S +G++SPY QV I+ + +++ G +KV S++ FQG E +I+ISTVR
Sbjct: 803 SPRSVGVISPYRKQVEKIRHCITKLDKELRGLDDIKDLKVGSVEEFQGQERSVILISTVR 862
Query: 218 SNNT 221
S+ +
Sbjct: 863 SSQS 866
Score = 165 (63.1 bits), Expect = 8.8e-07, Sum P(3) = 8.8e-07
Identities = 54/166 (32%), Positives = 84/166 (50%)
Query: 119 PYSFINVFGGRE-EFIEHSCRNMVEVSVVMKILRNLYK-AWVESKEKLS---IGIVSPYS 173
P F V G E E S N E + V L+ L + + K +LS +G++SPY
Sbjct: 755 PIIFHGVMGKDEREGNSPSFFNPEEAATVTSYLKLLLAPSSKKGKARLSPRSVGVISPYR 814
Query: 174 AQVIAIQEKLGSKYEKIAGFA----VKVKSIDGFQGGEEDIIIISTVRSNNTG------- 222
QV I+ + +++ G +KV S++ FQG E +I+ISTVRS+ +
Sbjct: 815 KQVEKIRHCITKLDKELRGLDDIKDLKVGSVEEFQGQERSVILISTVRSSQSFVQLDLDF 874
Query: 223 SIGFASTPQRINVALTRARHCLWILGSERTLNHSESVWESLLDDAK 268
++GF P+R NVA+TRA+ L ++G+ L H W+ L+ K
Sbjct: 875 NLGFLKNPKRFNVAVTRAKALLIVVGNPLLLGHDPD-WKVFLEFCK 919
Score = 54 (24.1 bits), Expect = 8.8e-07, Sum P(3) = 8.8e-07
Identities = 20/71 (28%), Positives = 33/71 (46%)
Query: 1 MEQLKFVVIDEAAQLKESESAIPLQ-LPCIQHA-------ILVGDEVQLPAMVESSVSGE 52
++ + IDEA E ES + + L ++ +L GD QL ++ S ++ +
Sbjct: 616 IDHFTHIFIDEAGHSMEPESLVAIAGLMEVKETDNPGGQLVLAGDPRQLGPVLRSPLTQK 675
Query: 53 AYFGRSLFERL 63
G SL ERL
Sbjct: 676 HGLGYSLLERL 686
Score = 40 (19.1 bits), Expect = 5.4e-07, Sum P(2) = 5.4e-07
Identities = 10/30 (33%), Positives = 11/30 (36%)
Query: 1469 LDENSPWKEFFESLSWNMGSESCQESASYD 1498
L + WK F E N G C A D
Sbjct: 905 LGHDPDWKVFLEFCKENGGYTGCPFPAKLD 934
>UNIPROTKB|F1P7T4 [details] [associations]
symbol:MOV10 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0035279 "mRNA cleavage involved in gene
silencing by miRNA" evidence=IEA] [GO:0000932 "cytoplasmic mRNA
processing body" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR003593 SMART:SM00382 GO:GO:0005524
GO:GO:0017111 GO:GO:0000932 GO:GO:0035279 InterPro:IPR026122
PANTHER:PTHR10887:SF17 GeneTree:ENSGT00550000074391 CTD:4343
OMA:VRFFKLD EMBL:AAEX03011080 EMBL:AAEX03011081 RefSeq:XP_540337.3
Ensembl:ENSCAFT00000021339 GeneID:483219 KEGG:cfa:483219
Uniprot:F1P7T4
Length = 1003
Score = 172 (65.6 bits), Expect = 5.7e-07, Sum P(2) = 5.7e-07
Identities = 73/244 (29%), Positives = 116/244 (47%)
Query: 1 MEQLKFVVIDEAAQLKESESAIPLQLPCIQHAILVGDEVQLPAMVESSVSGEAYFGRSLF 60
ME V I ++KE+++ P Q +L GD QL ++ S ++ + G SL
Sbjct: 651 MEPESLVAIAGLMEVKETDN------PGGQ-LVLAGDPRQLGPVLRSPLTQKHGLGYSLL 703
Query: 61 ERL-SYLG---------HPKHLLSM--QYRMHPSISFFPNSYFYENKIRDAPTV--RKRS 106
ERL +Y +P+ + + YR HP+I PN +YE +++ V R+R
Sbjct: 704 ERLLTYNALYKKGSNGYNPQFITKLLRNYRSHPTILDIPNQLYYEGELQACADVVDRERF 763
Query: 107 YEKRFLPGPMYGPYSFINVFGGRE-EFIEHSCRNMVEVSVVMKILRNLYK-AWVESKEKL 164
LP + P F V G E E S N E + V L+ L + + K +L
Sbjct: 764 CHWEGLPRQGF-PIIFHGVMGKDEREGNSPSFFNPEEAATVTSYLKLLLAPSSKKGKARL 822
Query: 165 S---IGIVSPYSAQVIAIQEKLGSKYEKIAGFA----VKVKSIDGFQGGEEDIIIISTVR 217
S +G++SPY QV I+ + +++ G +KV S++ FQG E +I+ISTVR
Sbjct: 823 SPRSVGVISPYRKQVEKIRHCITKLDKELRGLDDIKDLKVGSVEEFQGQERSVILISTVR 882
Query: 218 SNNT 221
S+ +
Sbjct: 883 SSQS 886
Score = 165 (63.1 bits), Expect = 9.5e-07, Sum P(3) = 9.5e-07
Identities = 54/166 (32%), Positives = 84/166 (50%)
Query: 119 PYSFINVFGGRE-EFIEHSCRNMVEVSVVMKILRNLYK-AWVESKEKLS---IGIVSPYS 173
P F V G E E S N E + V L+ L + + K +LS +G++SPY
Sbjct: 775 PIIFHGVMGKDEREGNSPSFFNPEEAATVTSYLKLLLAPSSKKGKARLSPRSVGVISPYR 834
Query: 174 AQVIAIQEKLGSKYEKIAGFA----VKVKSIDGFQGGEEDIIIISTVRSNNTG------- 222
QV I+ + +++ G +KV S++ FQG E +I+ISTVRS+ +
Sbjct: 835 KQVEKIRHCITKLDKELRGLDDIKDLKVGSVEEFQGQERSVILISTVRSSQSFVQLDLDF 894
Query: 223 SIGFASTPQRINVALTRARHCLWILGSERTLNHSESVWESLLDDAK 268
++GF P+R NVA+TRA+ L ++G+ L H W+ L+ K
Sbjct: 895 NLGFLKNPKRFNVAVTRAKALLIVVGNPLLLGHDPD-WKVFLEFCK 939
Score = 54 (24.1 bits), Expect = 9.5e-07, Sum P(3) = 9.5e-07
Identities = 20/71 (28%), Positives = 33/71 (46%)
Query: 1 MEQLKFVVIDEAAQLKESESAIPLQ-LPCIQHA-------ILVGDEVQLPAMVESSVSGE 52
++ + IDEA E ES + + L ++ +L GD QL ++ S ++ +
Sbjct: 636 IDHFTHIFIDEAGHSMEPESLVAIAGLMEVKETDNPGGQLVLAGDPRQLGPVLRSPLTQK 695
Query: 53 AYFGRSLFERL 63
G SL ERL
Sbjct: 696 HGLGYSLLERL 706
Score = 40 (19.1 bits), Expect = 5.7e-07, Sum P(2) = 5.7e-07
Identities = 10/30 (33%), Positives = 11/30 (36%)
Query: 1469 LDENSPWKEFFESLSWNMGSESCQESASYD 1498
L + WK F E N G C A D
Sbjct: 925 LGHDPDWKVFLEFCKENGGYTGCPFPAKLD 954
>UNIPROTKB|F1MUW2 [details] [associations]
symbol:F1MUW2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0097157 "pre-mRNA intronic binding" evidence=IEA] [GO:0000398
"mRNA splicing, via spliceosome" evidence=IEA] InterPro:IPR024860
InterPro:IPR026300 PIRSF:PIRSF038901 GO:GO:0000398 OMA:RTKAVGH
GO:GO:0071013 GO:GO:0097157 PANTHER:PTHR10887:SF5
GeneTree:ENSGT00700000104467 EMBL:DAAA02028420 EMBL:DAAA02028416
EMBL:DAAA02028417 EMBL:DAAA02028418 EMBL:DAAA02028419
IPI:IPI00852511 Ensembl:ENSBTAT00000016895 Uniprot:F1MUW2
Length = 1466
Score = 162 (62.1 bits), Expect = 5.7e-07, Sum P(2) = 5.7e-07
Identities = 74/256 (28%), Positives = 128/256 (50%)
Query: 7 VVIDEAAQLKESESAIPLQLPCIQHA-------ILVGDEVQLPAMVESSVSGEAYFG--R 57
++++EAAQ+ E E+ IPL L Q I++GD QLP ++++ ++ + Y +
Sbjct: 1041 ILMEEAAQILEIETFIPLLLQNPQDGFSRLKRWIMIGDHHQLPPVIKN-MAFQKYSNMEQ 1099
Query: 58 SLFERLSYLGHPKHLLSMQYRMHPSISFFPNSYFYENKIRDAPTVRKRSYEKRFLPGPMY 117
SLF R +G P L Q R S+ N + Y+N + + P V+ G +Y
Sbjct: 1100 SLFTRFVRVGVPTVDLDAQGRARASLCNLYN-WRYKN-LGNLPHVQLLLEFSTANAGLLY 1157
Query: 118 GPYSFINV--F-G-GREEFIEHSCRNMVEVSVVMKILRNLYKAWVE-SKEKLSIGIVSPY 172
+ INV F G G E + +N+ E V+ + +Y + +K+SI ++ Y
Sbjct: 1158 D-FQLINVEDFQGVGESEPNPYFYQNLGEAEYVVALF--MYMCLLGYPADKISI--LTTY 1212
Query: 173 SAQVIAIQEKLGSKY--EKIAGFAVKVKSIDGFQGGEEDIIIISTVRSNNTGSIGFASTP 230
+ Q I++ + + + G KV ++D FQG + D I++S VR T ++G
Sbjct: 1213 NGQKHLIRDIINRRCGSNPLIGRPNKVTTVDRFQGQQNDYILLSLVR---TRAVGHLRDV 1269
Query: 231 QRINVALTRARHCLWI 246
+R+ VA++RAR L+I
Sbjct: 1270 RRLVVAMSRARLGLYI 1285
Score = 54 (24.1 bits), Expect = 5.7e-07, Sum P(2) = 5.7e-07
Identities = 13/42 (30%), Positives = 22/42 (52%)
Query: 1920 VASAGNVNVENTDSNADECSGSHEGKIIPTSATSASEAQGSS 1961
V + V + T+ +E + S + I+P AT AS +Q +S
Sbjct: 1373 VEESEEVQSQETELETEEEAMSAQADIVPDEATDASSSQETS 1414
Score = 37 (18.1 bits), Expect = 3.2e-05, Sum P(2) = 3.2e-05
Identities = 8/27 (29%), Positives = 14/27 (51%)
Query: 755 EYMKEQALLDSTLPASFPSFNEAKHNV 781
E + ++ + T P + PS N H+V
Sbjct: 1432 EAIPAESEITGTGPVTVPSENNTPHDV 1458
>UNIPROTKB|E2R8C1 [details] [associations]
symbol:HELZ "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000571
Pfam:PF00642 PROSITE:PS50103 SMART:SM00356 GO:GO:0008270
GO:GO:0003676 CTD:9931 OMA:YRVALLY GeneTree:ENSGT00550000074391
EMBL:AAEX03006372 EMBL:AAEX03006373 EMBL:AAEX03006374
RefSeq:XP_862371.2 Ensembl:ENSCAFT00000018141 GeneID:490907
KEGG:cfa:490907 Uniprot:E2R8C1
Length = 1944
Score = 189 (71.6 bits), Expect = 7.0e-07, Sum P(4) = 7.0e-07
Identities = 70/225 (31%), Positives = 110/225 (48%)
Query: 7 VVIDEAAQLKESESAIPLQLPCIQ-HAILVGDEVQLPAMVESSVSGEAYFGRSLFERLSY 65
+++DEAAQ E E+ +PL L +L GD +QL V S + E SL +RL Y
Sbjct: 791 ILLDEAAQAMECETIMPLALATKNTRIVLAGDHMQLSPFVYSEFARERNLHVSLLDRL-Y 849
Query: 66 LGHPKH-----LLSMQYRMHPSISFFPNSYFYENKIRDAPTVRKRSYEKRFLPGPMYGPY 120
+P LL YR H +I + + FYE K+ + K+ K F Y P
Sbjct: 850 EHYPAEFPCRILLCENYRSHEAIINYTSELFYEGKLMASG---KQPAHKDF-----Y-PL 900
Query: 121 SFINVFGGR-EEFIEHSCRNMVEVSVVMKILRNLYKAWVESKEKL---SIGIVSPYSAQV 176
+F G +E + N EV V++ + L + W + KL SIG+V+PY+ QV
Sbjct: 901 TFFTARGEDVQEKNSTAFYNNAEVFEVVERVEELRRKWPVAWGKLDDGSIGVVTPYADQV 960
Query: 177 IAIQEKLGSKYEKIAGFAVKVKSIDGFQGGEEDIIIISTVRSNNT 221
I+ +L K +++ V V+ + QG + ++ +STVR+ +T
Sbjct: 961 FRIRAELRKK--RLSD--VNVERVLNVQGKQFRVLFLSTVRTRHT 1001
Score = 48 (22.0 bits), Expect = 7.0e-07, Sum P(4) = 7.0e-07
Identities = 12/43 (27%), Positives = 20/43 (46%)
Query: 225 GFASTPQRINVALTRARHCLWILGSERTL---NHSESVWESLL 264
GF S + +N A+TRA+ + ++G L WE +
Sbjct: 1026 GFLSNYKLLNTAITRAQSLVAVVGDPIALCSIGRCRKFWERFI 1068
Score = 43 (20.2 bits), Expect = 8.0e-07, Sum P(3) = 8.0e-07
Identities = 8/17 (47%), Positives = 12/17 (70%)
Query: 1687 IGNPLVLVSLGDNCPKF 1703
+G+P+ L S+G C KF
Sbjct: 1048 VGDPIALCSIG-RCRKF 1063
Score = 42 (19.8 bits), Expect = 7.0e-07, Sum P(4) = 7.0e-07
Identities = 11/35 (31%), Positives = 16/35 (45%)
Query: 822 LVQVRQLDDSLAQAMQVASSPEEWKSRGIKLFYEN 856
L Q ++L D + SSPE W + Y+N
Sbjct: 1783 LAQCKELQDHNNPSSFNFSSPESWVNTTSSTPYQN 1817
Score = 40 (19.1 bits), Expect = 1.1e-06, Sum P(4) = 1.1e-06
Identities = 7/25 (28%), Positives = 14/25 (56%)
Query: 435 NLEVPKTWAVTSNIVRFKNLADNES 459
N P++W T++ ++N+ N S
Sbjct: 1799 NFSSPESWVNTTSSTPYQNIPCNGS 1823
Score = 39 (18.8 bits), Expect = 7.0e-07, Sum P(4) = 7.0e-07
Identities = 8/27 (29%), Positives = 15/27 (55%)
Query: 1122 KQFTEKKELFEKAKSLAKSNSNQFYEF 1148
K+ ++ LF++ + S SN FY +
Sbjct: 1916 KKSSDPLSLFQELSLGSSSGSNGFYSY 1942
Score = 38 (18.4 bits), Expect = 1.6e-06, Sum P(3) = 1.6e-06
Identities = 11/41 (26%), Positives = 16/41 (39%)
Query: 219 NNTGSIGFASTPQRINVALTRARHCLWILGSERTLNHSESV 259
NN S F+S +N + + GS RT E +
Sbjct: 1793 NNPSSFNFSSPESWVNTTSSTPYQNIPCNGSSRTAQPRELI 1833
Score = 37 (18.1 bits), Expect = 8.0e-07, Sum P(3) = 8.0e-07
Identities = 17/58 (29%), Positives = 26/58 (44%)
Query: 1912 KGKSLETGVASAGNVNVENTDSNADECSGSHEGKIIPTSATSASEAQGSSQKPVSNRA 1969
K ++LE V+S+ N NV + + K I SA S+S+ KP + A
Sbjct: 1847 KSENLE--VSSSFNYNVLQ---HLGQFPPLMPNKQIVESANSSSQQSSGGSKPAMSYA 1899
>CGD|CAL0002159 [details] [associations]
symbol:DNA2 species:5476 "Candida albicans" [GO:0000784
"nuclear chromosome, telomeric region" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0031860 "telomeric 3' overhang
formation" evidence=IEA] [GO:0000733 "DNA strand renaturation"
evidence=IEA] [GO:0000706 "meiotic DNA double-strand break
processing" evidence=IEA] [GO:0001302 "replicative cell aging"
evidence=IEA] [GO:0043137 "DNA replication, removal of RNA primer"
evidence=IEA] [GO:0042162 "telomeric DNA binding" evidence=IEA]
[GO:0017108 "5'-flap endonuclease activity" evidence=IEA]
[GO:0000014 "single-stranded DNA specific endodeoxyribonuclease
activity" evidence=IEA] [GO:0004003 "ATP-dependent DNA helicase
activity" evidence=IEA] InterPro:IPR026851 InterPro:IPR014808
CGD:CAL0002159 Pfam:PF08696 eggNOG:COG1112 GO:GO:0017108
GO:GO:0043142 GO:GO:0033567 PANTHER:PTHR10887:SF14 KO:K10742
InterPro:IPR022765 Pfam:PF01930 EMBL:AACQ01000161 EMBL:AACQ01000157
RefSeq:XP_712310.1 RefSeq:XP_712454.1 ProteinModelPortal:Q59RL2
STRING:Q59RL2 GeneID:3645932 GeneID:3646072 KEGG:cal:CaO19.1192
KEGG:cal:CaO19.8783 Uniprot:Q59RL2
Length = 1426
Score = 157 (60.3 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 75/276 (27%), Positives = 132/276 (47%)
Query: 6 FVVIDEAAQLKESESAIPLQLPCIQHAILVGDEVQLPAMVESSVSGEAYFGRSLFERLS- 64
+ ++DEA+Q+ S PL+ + D++Q P + + RSLF L+
Sbjct: 1097 YCIVDEASQITLPVSLGPLRFAKKFVMVGDHDQLQ-PLVTHPDKRVKQELSRSLFSLLAK 1155
Query: 65 -YLGHPKHLLSMQYRMHPSISFFPNSYFYENKIR-DAPTVRKRSYE-------KRFLPGP 115
+ HL + QYRM+ I N+ Y NK++ + V + S + F+ G
Sbjct: 1156 EHPDSVSHL-TYQYRMNSDIMNVCNTLIYNNKLKCGSEQVAQNSLKIPHPEVLNSFI-GE 1213
Query: 116 MYGPYS-FIN-VFGGREE--FIEHSC-----RNMVEVSVVMK---ILRNLYKAWVESKEK 163
P S +I+ +F + F+++ N+ E+ + K +++ + A V K
Sbjct: 1214 DVSPDSQWIHKIFDEKNNVLFLDYDAVPAVEENVGEMVINTKEALLIQQIVNALVHGGVK 1273
Query: 164 LS-IGIVSPYSAQVIAIQEKLGSKYEKIAGFAVKVKSIDGFQGGEEDIIIISTVRSNNTG 222
IG++S Y AQ+ +++ L + + +++ + D +QG +++ IIIS VRSN
Sbjct: 1274 EDEIGVMSFYRAQLSVLKKNLNNLKD------LEILTADQYQGRDKECIIISLVRSNERK 1327
Query: 223 SIG-FASTPQRINVALTRARHCLWILGSERTLNHSE 257
G +R+NVA TRA+ L ILGS TL+ +E
Sbjct: 1328 FAGDLMKEYRRLNVATTRAKTKLIILGSRFTLSTNE 1363
>WB|WBGene00010989 [details] [associations]
symbol:R03D7.2 species:6239 "Caenorhabditis elegans"
[GO:0006974 "response to DNA damage stimulus" evidence=IMP]
GO:GO:0006974 EMBL:Z46828 PIR:T23869 RefSeq:NP_496354.1
ProteinModelPortal:Q09594 SMR:Q09594 EnsemblMetazoa:R03D7.2
GeneID:174682 KEGG:cel:CELE_R03D7.2 UCSC:R03D7.2 CTD:174682
WormBase:R03D7.2 eggNOG:KOG1801 GeneTree:ENSGT00530000065249
InParanoid:Q09594 NextBio:885046 Uniprot:Q09594
Length = 542
Score = 146 (56.5 bits), Expect = 4.3e-06, P = 4.3e-06
Identities = 70/261 (26%), Positives = 112/261 (42%)
Query: 2 EQLKFVVIDEAAQLKESE-SAIPLQLPCIQHAILVGDEVQLPAMVESSVSGE---AYFGR 57
++ IDEA+QL ++ LP ILVGD QLP +E ++ E A G
Sbjct: 214 DRFDITFIDEASQLALYVLGSLATMLPK-SRMILVGDMHQLPPYMEEALPAELKRAAIGE 272
Query: 58 SLFERLSYLGHPKHLLSMQYRMHPSISFFPNSYFYENKIRDA-PTVRKRSYEKRFLPGPM 116
L + P L+ +R I+ FY N + + P V K + P
Sbjct: 273 PLTLAVKGRRWPSMHLTRVHRCPKMITEVLGDLFYGNTLTSSKPGVTDIPVLKA-MGLPS 331
Query: 117 YGPYSFINVFGGREEFIEHSCRNMVEVSVVMKILRNLYKAWVESKEKLSIGIVSPYSAQV 176
P F+N + + + S N E ++++ L + + +K++ I++ Y AQ
Sbjct: 332 RHPMVFVN-YTSPQTAVGKSFSNEGEARYALQLVEALTRYASTANKKITAAILNFYGAQY 390
Query: 177 IAIQEKLGSKYEKIAGFAVKVKSIDGFQGGEEDIIIISTVRSNNTGSIGFASTPQRINVA 236
+ Y +A V V +IDG QG E D+ I+ RS+ F RINVA
Sbjct: 391 SYV-------YS-MAEDEVTVNTIDGCQGQEYDVTIVLLTRSDPYERSKFLVNANRINVA 442
Query: 237 LTRARHCLWILGSERTLNHSE 257
L+R + I+G +R L ++
Sbjct: 443 LSRPKIATVIIG-QRHLTGNQ 462
>MGI|MGI:1276102 [details] [associations]
symbol:Aqr "aquarius" species:10090 "Mus musculus"
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IEA]
[GO:0003674 "molecular_function" evidence=ND] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005681 "spliceosomal complex" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=ISO] [GO:0097157 "pre-mRNA
intronic binding" evidence=IEA] InterPro:IPR024860
InterPro:IPR026300 PIRSF:PIRSF038901 MGI:MGI:1276102 GO:GO:0000398
CTD:9716 eggNOG:COG1112 HOGENOM:HOG000170551 HOVERGEN:HBG080430
KO:K12874 OMA:RTKAVGH OrthoDB:EOG4ZPDTF GO:GO:0071013 GO:GO:0097157
PANTHER:PTHR10887:SF5 EMBL:AK122310 EMBL:AK145547 EMBL:AK151716
EMBL:BC042479 EMBL:U90333 IPI:IPI00330263 RefSeq:NP_033832.2
UniGene:Mm.2545 ProteinModelPortal:Q8CFQ3 SMR:Q8CFQ3
PhosphoSite:Q8CFQ3 PaxDb:Q8CFQ3 PRIDE:Q8CFQ3
Ensembl:ENSMUST00000043160 GeneID:11834 KEGG:mmu:11834
GeneTree:ENSGT00700000104467 InParanoid:Q8CFQ3 NextBio:279759
Bgee:Q8CFQ3 CleanEx:MM_AQR Genevestigator:Q8CFQ3
GermOnline:ENSMUSG00000040383 Uniprot:Q8CFQ3
Length = 1481
Score = 163 (62.4 bits), Expect = 9.9e-06, Sum P(2) = 9.9e-06
Identities = 74/256 (28%), Positives = 128/256 (50%)
Query: 7 VVIDEAAQLKESESAIPLQLPCIQHA-------ILVGDEVQLPAMVESSVSGEAYFG--R 57
++++EAAQ+ E E+ IPL L Q I++GD QLP ++++ ++ + Y +
Sbjct: 1063 ILMEEAAQILEIETFIPLLLQNPQDGFSRLKRWIMIGDHHQLPPVIKN-MAFQKYSNMEQ 1121
Query: 58 SLFERLSYLGHPKHLLSMQYRMHPSISFFPNSYFYENKIRDAPTVRKRSYEKRFLPGPMY 117
SLF R +G P L Q R S+ N + Y+N + + P V+ G +Y
Sbjct: 1122 SLFTRFVRVGVPTVDLDAQGRARASLCNLYN-WRYKN-LGNLPHVQLLPEFSTANAGLLY 1179
Query: 118 GPYSFINV--F-G-GREEFIEHSCRNMVEVSVVMKILRNLYKAWVE-SKEKLSIGIVSPY 172
+ INV F G G E + +N+ E V+ + +Y + +K+SI ++ Y
Sbjct: 1180 D-FQLINVEDFQGVGESEPNPYFYQNLGEAEYVVALF--MYMCLLGYPADKISI--LTTY 1234
Query: 173 SAQVIAIQEKLGSKY--EKIAGFAVKVKSIDGFQGGEEDIIIISTVRSNNTGSIGFASTP 230
+ Q I++ + + + G KV ++D FQG + D I++S VR T ++G
Sbjct: 1235 NGQKHLIRDIINRRCGNNPLIGRPNKVTTVDRFQGQQNDYILLSLVR---TRAVGHLRDV 1291
Query: 231 QRINVALTRARHCLWI 246
+R+ VA++RAR L+I
Sbjct: 1292 RRLVVAMSRARLGLYI 1307
Score = 41 (19.5 bits), Expect = 9.9e-06, Sum P(2) = 9.9e-06
Identities = 11/41 (26%), Positives = 23/41 (56%)
Query: 1929 ENTDSNADECSGSHEGKIIPTSA-TSASEAQGSSQKPVSNR 1968
+ T+ A+E + S +G + P+ A S S+ ++Q S++
Sbjct: 1404 QETEMEAEEETVSAQGNLTPSPADASLSQETPAAQPDCSSQ 1444
>UNIPROTKB|J3KPX5 [details] [associations]
symbol:DNA2 "DNA replication ATP-dependent
helicase/nuclease DNA2" species:9606 "Homo sapiens" [GO:0017108
"5'-flap endonuclease activity" evidence=IEA] [GO:0033567 "DNA
replication, Okazaki fragment processing" evidence=IEA] [GO:0043142
"single-stranded DNA-dependent ATPase activity" evidence=IEA]
InterPro:IPR026851 InterPro:IPR014808 Pfam:PF08696 GO:GO:0017108
GO:GO:0043142 GO:GO:0033567 PANTHER:PTHR10887:SF14 EMBL:AL136233
HGNC:HGNC:2939 OMA:EHESLCH ProteinModelPortal:J3KPX5
Ensembl:ENST00000399180 Uniprot:J3KPX5
Length = 1146
Score = 158 (60.7 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 50/166 (30%), Positives = 84/166 (50%)
Query: 119 PYSFINV--FGGREEFIEHSCRNMVEVSVVMKILRNLYKAWVESKEKLSIGIVSPYSAQV 176
P F+N E+ + N+ E +++ + KA + IGI++PY Q+
Sbjct: 977 PVCFLNTDKVPAPEQVEKGGVSNVTEAKLIVFLTSIFVKAGCSPSD---IGIIAPYRQQL 1033
Query: 177 IAIQEKLGSKYEKIAGFAVKVKSIDGFQGGEEDIIIISTVRSNNTGSIG-FASTPQRINV 235
I + L + G V+V ++D +QG ++ I+++S VRSN G++G +R+NV
Sbjct: 1034 KIINDLLA----RSIGM-VEVNTVDKYQGRDKSIVLVSFVRSNKDGTVGELLKDWRRLNV 1088
Query: 236 ALTRARHCLWILGS----------ERTLNHSESVWESLLDDAKARQ 271
A+TRA+H L +LG E+ LNH S E L+ D +R+
Sbjct: 1089 AITRAKHKLILLGCVPSLNCYPPLEKLLNHLNS--EKLIIDLPSRE 1132
Score = 42 (19.8 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 14/50 (28%), Positives = 25/50 (50%)
Query: 28 CIQHAILVG--DEV-QLPAMVESSVSGEAYFGRSLFERLSYLGHPKHLLS 74
C+Q AI +++ +L ++E S EA LF++ P+ +LS
Sbjct: 77 CLQFAIPASRMEQLNELELLMEKSFWEEAELPAELFQKKVVASFPRTVLS 126
>UNIPROTKB|O60306 [details] [associations]
symbol:AQR "Intron-binding protein aquarius" species:9606
"Homo sapiens" [GO:0097157 "pre-mRNA intronic binding"
evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IDA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC] InterPro:IPR024860 InterPro:IPR026300
PIRSF:PIRSF038901 GO:GO:0000398 EMBL:AB011132 EMBL:EF553519
EMBL:BC036913 EMBL:BC070379 EMBL:BC108262 EMBL:BC127111
EMBL:BC127112 IPI:IPI00796835 PIR:T00333 RefSeq:NP_055506.1
UniGene:Hs.510958 ProteinModelPortal:O60306 SMR:O60306
IntAct:O60306 STRING:O60306 PhosphoSite:O60306 PaxDb:O60306
PRIDE:O60306 Ensembl:ENST00000156471 GeneID:9716 KEGG:hsa:9716
UCSC:uc001ziv.3 CTD:9716 GeneCards:GC15M035147 HGNC:HGNC:29513
MIM:610548 neXtProt:NX_O60306 PharmGKB:PA134869224 eggNOG:COG1112
HOGENOM:HOG000170551 HOVERGEN:HBG080430 InParanoid:O60306 KO:K12874
OMA:RTKAVGH OrthoDB:EOG4ZPDTF ChiTaRS:AQR GenomeRNAi:9716
NextBio:36525 Bgee:O60306 CleanEx:HS_AQR Genevestigator:O60306
GermOnline:ENSG00000021776 GO:GO:0071013 GO:GO:0097157
PANTHER:PTHR10887:SF5 Uniprot:O60306
Length = 1485
Score = 163 (62.4 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05
Identities = 74/256 (28%), Positives = 128/256 (50%)
Query: 7 VVIDEAAQLKESESAIPLQLPCIQHA-------ILVGDEVQLPAMVESSVSGEAYFG--R 57
++++EAAQ+ E E+ IPL L Q I++GD QLP ++++ ++ + Y +
Sbjct: 1059 ILMEEAAQILEIETFIPLLLQNPQDGFSRLKRWIMIGDHHQLPPVIKN-MAFQKYSNMEQ 1117
Query: 58 SLFERLSYLGHPKHLLSMQYRMHPSISFFPNSYFYENKIRDAPTVRKRSYEKRFLPGPMY 117
SLF R +G P L Q R S+ N + Y+N + + P V+ G +Y
Sbjct: 1118 SLFTRFVRVGVPTVDLDAQGRARASLCNLYN-WRYKN-LGNLPHVQLLPEFSTANAGLLY 1175
Query: 118 GPYSFINV--F-G-GREEFIEHSCRNMVEVSVVMKILRNLYKAWVE-SKEKLSIGIVSPY 172
+ INV F G G E + +N+ E V+ + +Y + +K+SI ++ Y
Sbjct: 1176 D-FQLINVEDFQGVGESEPNPYFYQNLGEAEYVVALF--MYMCLLGYPADKISI--LTTY 1230
Query: 173 SAQVIAIQEKLGSKY--EKIAGFAVKVKSIDGFQGGEEDIIIISTVRSNNTGSIGFASTP 230
+ Q I++ + + + G KV ++D FQG + D I++S VR T ++G
Sbjct: 1231 NGQKHLIRDIINRRCGNNPLIGRPNKVTTVDRFQGQQNDYILLSLVR---TRAVGHLRDV 1287
Query: 231 QRINVALTRARHCLWI 246
+R+ VA++RAR L+I
Sbjct: 1288 RRLVVAMSRARLGLYI 1303
Score = 38 (18.4 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05
Identities = 8/43 (18%), Positives = 18/43 (41%)
Query: 631 VLNLAQSVIELLYRFFPHSVDILKPETSLIYGEPPVLLESGND 673
+ N+ Q + +Y + H + + PP ++E G +
Sbjct: 1355 IKNMPQ-MANFVYNMYMHLIQTTHHYHQTLLQLPPAMVEEGEE 1396
>UNIPROTKB|F1SRZ7 [details] [associations]
symbol:F1SRZ7 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0097157 "pre-mRNA intronic binding" evidence=IEA]
[GO:0005681 "spliceosomal complex" evidence=IEA] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IEA] InterPro:IPR024860
GO:GO:0005681 GO:GO:0000398 OMA:RTKAVGH GO:GO:0097157
PANTHER:PTHR10887:SF5 GeneTree:ENSGT00700000104467 EMBL:CU633172
Ensembl:ENSSSCT00000005301 Uniprot:F1SRZ7
Length = 1206
Score = 142 (55.0 bits), Expect = 3.4e-05, P = 3.4e-05
Identities = 65/236 (27%), Positives = 115/236 (48%)
Query: 7 VVIDEAAQLKESESAIPLQLPCIQHA-------ILVGDEVQLPAMVESSVSGEAYFG--R 57
++++EAAQ+ E E+ IPL L Q I++GD QLP ++++ ++ + Y +
Sbjct: 976 ILMEEAAQILEIETFIPLLLQNPQDGFSRLKRWIMIGDHHQLPPVIKN-MAFQKYSNMEQ 1034
Query: 58 SLFERLSYLGHPKHLLSMQYRMHPSISFFPNSYFYENKIRDAPTVRKRSYEKRFLPGPMY 117
SLF R +G P L Q R S+ N + Y+N + + P V+ G +Y
Sbjct: 1035 SLFTRFVRVGVPTVDLDAQGRARASLCNLYN-WRYKN-LGNLPHVQLLPEFSTANAGLLY 1092
Query: 118 GPYSFINV--F-G-GREEFIEHSCRNMVEVSVVMKILRNLYKAWVE-SKEKLSIGIVSPY 172
+ INV F G G E + +N+ E V+ + +Y + +K+SI ++ Y
Sbjct: 1093 D-FQLINVEDFQGVGESEPNPYFYQNLGEAEYVVALF--MYMCLLGYPADKISI--LTTY 1147
Query: 173 SAQVIAIQEKLGSKY--EKIAGFAVKVKSIDGFQGGEEDIIIISTVRSNNTGSIGF 226
+ Q I++ + + + G KV ++D FQG + D I++S VR+ G + +
Sbjct: 1148 NGQKHLIRDIINRRCGSNPLIGRPNKVTTVDRFQGQQNDYILLSLVRTRAVGHLRY 1203
>ZFIN|ZDB-GENE-050508-3 [details] [associations]
symbol:zgc:113057 "zgc:113057" species:7955 "Danio
rerio" [GO:0004386 "helicase activity" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR026855 ZFIN:ZDB-GENE-050508-3
GO:GO:0004386 eggNOG:COG1112 PANTHER:PTHR10887:SF16 IPI:IPI00492493
EMBL:BC094297 RefSeq:NP_001018332.1 UniGene:Dr.115608
ProteinModelPortal:Q52KK8 GeneID:552926 KEGG:dre:552926
HOGENOM:HOG000007768 InParanoid:Q52KK8 NextBio:20879878
Uniprot:Q52KK8
Length = 231
Score = 130 (50.8 bits), Expect = 3.4e-05, P = 3.4e-05
Identities = 47/137 (34%), Positives = 66/137 (48%)
Query: 166 IGIVSPYSAQVIAIQEKLGSKYEKIAGFAVKVKSIDGFQGGEEDIIIISTVRSNNTGSI- 224
I I++PY+AQV I+ L K + +KS QG E +I+STVRS +T I
Sbjct: 75 IAILTPYNAQVSEIKMTLEKKNVRNVTVCTVMKS----QGSEWPYVIVSTVRSCSTSDIQ 130
Query: 225 ---------------GFASTPQRINVALTRARHCLWILGSERTLNHSESVWESLLDDAKA 269
GF + ++NVA+TRA+ L ILG+ L E +W+ LLD
Sbjct: 131 AYRVRPHKAWLGKRLGFVTDANQVNVAITRAQDGLCILGNSDLLRCCE-LWDRLLDHYYR 189
Query: 270 RQCFFNIDED-KDLAKA 285
+ C N D + AKA
Sbjct: 190 KSCVVNPASDIRVKAKA 206
>UNIPROTKB|P51530 [details] [associations]
symbol:DNA2 "DNA replication ATP-dependent
helicase/nuclease DNA2" species:9606 "Homo sapiens" [GO:0005524
"ATP binding" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0051539 "4 iron, 4 sulfur cluster binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0042645
"mitochondrial nucleoid" evidence=IDA] [GO:0043504 "mitochondrial
DNA repair" evidence=IDA] [GO:0006264 "mitochondrial DNA
replication" evidence=IDA] [GO:0017108 "5'-flap endonuclease
activity" evidence=IDA] [GO:0045740 "positive regulation of DNA
replication" evidence=IDA] [GO:0043137 "DNA replication, removal of
RNA primer" evidence=IDA] [GO:0006284 "base-excision repair"
evidence=IDA] [GO:0016890 "site-specific endodeoxyribonuclease
activity, specific for altered base" evidence=IDA] [GO:0005760
"gamma DNA polymerase complex" evidence=IDA] [GO:0016887 "ATPase
activity" evidence=TAS] [GO:0004386 "helicase activity"
evidence=TAS] [GO:0000076 "DNA replication checkpoint"
evidence=IMP] [GO:0006260 "DNA replication" evidence=IMP]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0033567 "DNA
replication, Okazaki fragment processing" evidence=IDA] [GO:0043142
"single-stranded DNA-dependent ATPase activity" evidence=IDA]
[GO:0003678 "DNA helicase activity" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0000729 "DNA double-strand
break processing" evidence=IDA] [GO:0004518 "nuclease activity"
evidence=IDA] [GO:0043139 "5'-3' DNA helicase activity"
evidence=IDA] [GO:0000084 "S phase of mitotic cell cycle"
evidence=TAS] [GO:0000278 "mitotic cell cycle" evidence=TAS]
[GO:0000722 "telomere maintenance via recombination" evidence=TAS]
[GO:0000723 "telomere maintenance" evidence=TAS] [GO:0005654
"nucleoplasm" evidence=TAS] [GO:0006271 "DNA strand elongation
involved in DNA replication" evidence=TAS] [GO:0032201 "telomere
maintenance via semi-conservative replication" evidence=TAS]
[GO:0006200 "ATP catabolic process" evidence=TAS] [GO:0032508 "DNA
duplex unwinding" evidence=IDA] InterPro:IPR026851
InterPro:IPR014808 Pfam:PF08696 GO:GO:0005524 Reactome:REACT_115566
GO:GO:0005654 GO:GO:0046872 GO:GO:0006284 GO:GO:0003677
GO:GO:0051539 GO:GO:0042645 GO:GO:0000084 GO:GO:0016890
eggNOG:COG1112 GO:GO:0045740 GO:GO:0000722 GO:GO:0000729
GO:GO:0017108 Reactome:REACT_383 GO:GO:0000076 GO:GO:0043137
GO:GO:0043139 GO:GO:0043142 GO:GO:0043504 GO:GO:0006264
PANTHER:PTHR10887:SF14 CTD:1763 HOGENOM:HOG000168456
HOVERGEN:HBG081456 KO:K10742 EMBL:D42046 EMBL:AL136233
EMBL:BC041115 EMBL:BC053574 EMBL:BC063664 EMBL:BC111740
EMBL:BC028188 IPI:IPI00216142 IPI:IPI00816670 IPI:IPI00816801
PIR:T50697 RefSeq:NP_001073918.2 UniGene:Hs.532446
ProteinModelPortal:P51530 SMR:P51530 STRING:P51530
PhosphoSite:P51530 DMDM:119370373 PaxDb:P51530 PRIDE:P51530
Ensembl:ENST00000358410 Ensembl:ENST00000399179
Ensembl:ENST00000549829 GeneID:1763 KEGG:hsa:1763 UCSC:uc021prt.1
GeneCards:GC10M070173 HGNC:HGNC:2939 HPA:HPA037487 MIM:601810
neXtProt:NX_P51530 InParanoid:P51530 GenomeRNAi:1763 NextBio:7187
ArrayExpress:P51530 Bgee:P51530 CleanEx:HS_DNA2
Genevestigator:P51530 GermOnline:ENSG00000138346 GO:GO:0032201
Uniprot:P51530
Length = 1060
Score = 158 (60.7 bits), Expect = 3.8e-05, Sum P(2) = 3.8e-05
Identities = 50/166 (30%), Positives = 84/166 (50%)
Query: 119 PYSFINV--FGGREEFIEHSCRNMVEVSVVMKILRNLYKAWVESKEKLSIGIVSPYSAQV 176
P F+N E+ + N+ E +++ + KA + IGI++PY Q+
Sbjct: 891 PVCFLNTDKVPAPEQVEKGGVSNVTEAKLIVFLTSIFVKAGCSPSD---IGIIAPYRQQL 947
Query: 177 IAIQEKLGSKYEKIAGFAVKVKSIDGFQGGEEDIIIISTVRSNNTGSIG-FASTPQRINV 235
I + L + G V+V ++D +QG ++ I+++S VRSN G++G +R+NV
Sbjct: 948 KIINDLLA----RSIGM-VEVNTVDKYQGRDKSIVLVSFVRSNKDGTVGELLKDWRRLNV 1002
Query: 236 ALTRARHCLWILGS----------ERTLNHSESVWESLLDDAKARQ 271
A+TRA+H L +LG E+ LNH S E L+ D +R+
Sbjct: 1003 AITRAKHKLILLGCVPSLNCYPPLEKLLNHLNS--EKLIIDLPSRE 1046
Score = 37 (18.1 bits), Expect = 3.8e-05, Sum P(2) = 3.8e-05
Identities = 10/35 (28%), Positives = 17/35 (48%)
Query: 40 QLPAMVESSVSGEAYFGRSLFERLSYLGHPKHLLS 74
+L ++E S EA LF++ P+ +LS
Sbjct: 6 ELELLMEKSFWEEAELPAELFQKKVVASFPRTVLS 40
>UNIPROTKB|F8VR31 [details] [associations]
symbol:DNA2 "DNA replication ATP-dependent
helicase/nuclease DNA2" species:9606 "Homo sapiens" [GO:0017108
"5'-flap endonuclease activity" evidence=IEA] [GO:0033567 "DNA
replication, Okazaki fragment processing" evidence=IEA] [GO:0043142
"single-stranded DNA-dependent ATPase activity" evidence=IEA]
InterPro:IPR026851 InterPro:IPR014808 Pfam:PF08696 GO:GO:0017108
GO:GO:0043142 GO:GO:0033567 PANTHER:PTHR10887:SF14 EMBL:AL136233
HGNC:HGNC:2939 IPI:IPI01022599 ProteinModelPortal:F8VR31
Ensembl:ENST00000551118 UCSC:uc001jog.2 ArrayExpress:F8VR31
Bgee:F8VR31 Uniprot:F8VR31
Length = 807
Score = 154 (59.3 bits), Expect = 5.1e-05, Sum P(2) = 5.1e-05
Identities = 39/117 (33%), Positives = 67/117 (57%)
Query: 139 NMVEVSVVMKILRNLYKAWVESKEKLSIGIVSPYSAQVIAIQEKLGSKYEKIAGFAVKVK 198
N+ E +++ + KA + IGI++PY Q+ I + L + G V+V
Sbjct: 675 NVTEAKLIVFLTSIFVKAGCSPSD---IGIIAPYRQQLKIINDLLA----RSIGM-VEVN 726
Query: 199 SIDGFQGGEEDIIIISTVRSNNTGSIG-FASTPQRINVALTRARHCLWILGSERTLN 254
++D +QG ++ I+++S VRSN G++G +R+NVA+TRA+H L +LG +LN
Sbjct: 727 TVDKYQGRDKSIVLVSFVRSNKDGTVGELLKDWRRLNVAITRAKHKLILLGCVPSLN 783
Score = 37 (18.1 bits), Expect = 5.1e-05, Sum P(2) = 5.1e-05
Identities = 10/35 (28%), Positives = 17/35 (48%)
Query: 40 QLPAMVESSVSGEAYFGRSLFERLSYLGHPKHLLS 74
+L ++E S EA LF++ P+ +LS
Sbjct: 6 ELELLMEKSFWEEAELPAELFQKKVVASFPRTVLS 40
>UNIPROTKB|G4MK85 [details] [associations]
symbol:MGG_02491 "DNA replication ATP-dependent helicase
dna2" species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR026851 InterPro:IPR014808 Pfam:PF08696
GO:GO:0004386 EMBL:CM001231 GO:GO:0017108 GO:GO:0043142
GO:GO:0033567 PANTHER:PTHR10887:SF14 KO:K10742 InterPro:IPR022765
Pfam:PF01930 RefSeq:XP_003709288.1 ProteinModelPortal:G4MK85
EnsemblFungi:MGG_02491T0 GeneID:2681588 KEGG:mgr:MGG_02491
Uniprot:G4MK85
Length = 1689
Score = 158 (60.7 bits), Expect = 5.6e-05, Sum P(2) = 5.6e-05
Identities = 42/126 (33%), Positives = 71/126 (56%)
Query: 129 REEFIEHSCRNMVEVSVVMKILRNLYKAWVESKEKLSIGIVSPYSAQVIAIQEKLGSKYE 188
REE + N VE +V++++ +L V + E IG+++ Y +Q+ ++ KL
Sbjct: 1445 REEAKGNRIVNPVEAQLVVQLVESLMTLGVPANE---IGVMTHYRSQLALLKHKLLRGKN 1501
Query: 189 KIAGFAVKVKSIDGFQGGEEDIIIISTVRSNNTGSIG-FASTPQRINVALTRARHCLWIL 247
AV++ + D FQG +++++++S VRSN IG +RINVA TRA+ L ++
Sbjct: 1502 TGDATAVEMHTADRFQGRDKEVVVLSLVRSNEACHIGDLLRDWRRINVAFTRAKTKLLVI 1561
Query: 248 GSERTL 253
GS TL
Sbjct: 1562 GSRETL 1567
Score = 40 (19.1 bits), Expect = 5.6e-05, Sum P(2) = 5.6e-05
Identities = 14/53 (26%), Positives = 22/53 (41%)
Query: 333 KKSVINLLLKLSSGWRPKRRNVDSVSASSSHIIKQFKVEGFYIISTTDIVKDV 385
K + N L KLSS K ++V KQ K+ + I++D+
Sbjct: 1628 KTAGANALPKLSSAGVSKAGGKENVPPGRRQPTKQAKIGAKMLTKGKPILRDI 1680
>UNIPROTKB|F1PA16 [details] [associations]
symbol:AQR "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] [GO:0097157 "pre-mRNA intronic binding" evidence=IEA]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IEA]
InterPro:IPR024860 InterPro:IPR026300 PIRSF:PIRSF038901
GO:GO:0000398 OMA:RTKAVGH GO:GO:0071013 GO:GO:0097157
PANTHER:PTHR10887:SF5 GeneTree:ENSGT00700000104467
EMBL:AAEX03016041 Ensembl:ENSCAFT00000013319 Uniprot:F1PA16
Length = 1483
Score = 163 (62.4 bits), Expect = 9.0e-05, Sum P(3) = 9.0e-05
Identities = 74/256 (28%), Positives = 128/256 (50%)
Query: 7 VVIDEAAQLKESESAIPLQLPCIQHA-------ILVGDEVQLPAMVESSVSGEAYFG--R 57
++++EAAQ+ E E+ IPL L Q I++GD QLP ++++ ++ + Y +
Sbjct: 1058 ILMEEAAQILEIETFIPLLLQNPQDGFSRLKRWIMIGDHHQLPPVIKN-MAFQKYSNMEQ 1116
Query: 58 SLFERLSYLGHPKHLLSMQYRMHPSISFFPNSYFYENKIRDAPTVRKRSYEKRFLPGPMY 117
SLF R +G P L Q R S+ N + Y+N + + P V+ G +Y
Sbjct: 1117 SLFTRFVRVGVPTVDLDAQGRARASLCNLYN-WRYKN-LGNLPHVQLLPEFSTANAGLLY 1174
Query: 118 GPYSFINV--F-G-GREEFIEHSCRNMVEVSVVMKILRNLYKAWVE-SKEKLSIGIVSPY 172
+ INV F G G E + +N+ E V+ + +Y + +K+SI ++ Y
Sbjct: 1175 D-FQLINVEDFQGVGESEPNPYFYQNLGEAEYVVALF--MYMCLLGYPADKISI--LTTY 1229
Query: 173 SAQVIAIQEKLGSKY--EKIAGFAVKVKSIDGFQGGEEDIIIISTVRSNNTGSIGFASTP 230
+ Q I++ + + + G KV ++D FQG + D I++S VR T ++G
Sbjct: 1230 NGQKHLIRDIINRRCGSNPLIGRPNKVTTVDRFQGQQNDYILLSLVR---TRAVGHLRDV 1286
Query: 231 QRINVALTRARHCLWI 246
+R+ VA++RAR L+I
Sbjct: 1287 RRLVVAMSRARLGLYI 1302
Score = 44 (20.5 bits), Expect = 9.0e-05, Sum P(3) = 9.0e-05
Identities = 20/89 (22%), Positives = 34/89 (38%)
Query: 1883 LVEIYERLQSSRPKLEPLLNLLFQQYINCKGKSLE--TGVASAGNVNVENTDSNADECSG 1940
+VE E +QS +LE ++ N L T S+ + T+S ++
Sbjct: 1389 MVEEGEEVQSQETELET------EEEANPAQADLSSLTDATSSQESSASQTESTPNQTGA 1442
Query: 1941 SHEGKIIPTSATSASEAQGSSQKPVSNRA 1969
S + IPT++ + G P A
Sbjct: 1443 SSSPEAIPTTSDITATVAGPVTVPAEANA 1471
Score = 42 (19.8 bits), Expect = 0.00014, Sum P(3) = 0.00014
Identities = 12/52 (23%), Positives = 22/52 (42%)
Query: 1920 VASAGNVNVENTDSNADECSGSHEGKIIP-TSATSASEAQGSSQKPVSNRAG 1970
V V + T+ +E + + + T ATS+ E+ S + N+ G
Sbjct: 1390 VEEGEEVQSQETELETEEEANPAQADLSSLTDATSSQESSASQTESTPNQTG 1441
Score = 38 (18.4 bits), Expect = 9.0e-05, Sum P(3) = 9.0e-05
Identities = 8/43 (18%), Positives = 18/43 (41%)
Query: 631 VLNLAQSVIELLYRFFPHSVDILKPETSLIYGEPPVLLESGND 673
+ N+ Q + +Y + H + + PP ++E G +
Sbjct: 1354 IKNMPQ-MANFVYNMYMHLIQTTHHYHQTLLQLPPAMVEEGEE 1395
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.318 0.134 0.397 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 1987 1881 0.00099 125 3 11 22 0.40 34
40 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 179
No. of states in DFA: 643 (68 KB)
Total size of DFA: 811 KB (2340 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 161.47u 0.19s 161.66t Elapsed: 00:00:07
Total cpu time: 161.51u 0.19s 161.70t Elapsed: 00:00:07
Start: Fri May 10 04:54:43 2013 End: Fri May 10 04:54:50 2013
WARNINGS ISSUED: 1