BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 000169
(1953 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q6EVK6|BRM_ARATH ATP-dependent helicase BRM OS=Arabidopsis thaliana GN=BRM PE=1 SV=1
Length = 2193
Score = 2415 bits (6259), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 1308/1898 (68%), Positives = 1494/1898 (78%), Gaps = 61/1898 (3%)
Query: 59 RKPDGNEAILAYQVGSLPGLMGGGNFASPPGSMQPPQQSRKFFDFAQQHAISQESQNRSQ 118
R D NE + AYQ G + G+MGGGNFAS PGSMQ PQQSR FF+ QQ Q+ + +Q
Sbjct: 64 RNSDTNENMFAYQPGGVQGMMGGGNFASSPGSMQMPQQSRNFFESPQQQQQQQQQGSSTQ 123
Query: 119 GVEHQLLNPVHQAYMQYALQAQQKSASVLQSQQQAKLGMLGPAS-GKDQDMRMGNLKMQE 177
+ Q NP+ QAY+Q+A+QAQ + A QQA++GM+G +S GKDQD RMG L MQ+
Sbjct: 124 EGQ-QNFNPMQQAYIQFAMQAQHQKAQ-----QQARMGMVGSSSVGKDQDARMGMLNMQD 177
Query: 178 LISMQSANQAQASSSKNSSEQFGRGEKQMEQPQQQVSDQKGEPKPPSQQTLGGQGMAANI 237
L ++Q QASSSK S +QF RGE+Q E QQ ++ K P+ QQ GQ M N+
Sbjct: 178 L---NPSSQPQASSSKPSGDQFARGERQTESSSQQRNETKSHPQ---QQVGTGQLMPGNM 231
Query: 238 IRPMQAAQHQQSIQNAAGNQLAMAAQ---LQAWALERNIDLSQPANASLIAQLIPIMQSR 294
IRPMQA Q QQ + N NQLA A Q +QAWA ERNIDLS PANAS Q+ I+Q+R
Sbjct: 232 IRPMQAPQAQQLVNNMGNNQLAFAQQWQAMQAWARERNIDLSHPANAS---QMAHILQAR 288
Query: 295 IVANHKANESNMGAPSSPVPVSKQQVTSPTIAGENSPHANSSSDVSGQSGSAKARPTVSP 354
+ A KA E N+ + S +P+S Q +S + GENSPHANS+SD+SGQSGSAKAR +S
Sbjct: 289 MAAQQKAGEGNVASQSPSIPISSQPASSSVVPGENSPHANSASDISGQSGSAKARHALST 348
Query: 355 SPLGSTTSAAVVNNVNNISLQQFSVHGRDNQVPSRQPVAIGNGLPPIHPPQTSLNMTPGV 414
ST+S +VN N FS GR+N + R V NG+P +P QTS N TP +
Sbjct: 349 GSFASTSSPRMVNPAMN----PFSGQGRENPMYPRHLVQPTNGMPSGNPLQTSANETPVL 404
Query: 415 DQPLPVKNSSGP-ENSQMQYLRQLNRSSPQSAIPSSDGSSANNFSSQGGLATQMPQQRLG 473
DQ K S GP E+ QMQ RQLN +P PS G +N+ S Q G TQ QQR G
Sbjct: 405 DQNASTKKSLGPAEHLQMQQPRQLNTPTPNLVAPSDTGPLSNS-SLQSGQGTQQAQQRSG 463
Query: 474 FTKHQLHVLKAQILAFRRLKKGEGTLPQELLRAIVPPSLELQQQPAQQQFLPAAVNNQDR 533
FTK QLHVLKAQILAFRRLKKGEG+LP ELL+AI PP LELQ Q+Q PA QDR
Sbjct: 464 FTKQQLHVLKAQILAFRRLKKGEGSLPPELLQAISPPPLELQ---TQRQISPAIGKVQDR 520
Query: 534 VSGKIAEDQLRHLESNGKDAQAVSSSNVQSLPKEEAYAGDDKAAVSPV-GQGMSAVTKEP 592
S K EDQ R LE GK++QA +SSN KEE GD + A++ Q + KE
Sbjct: 521 SSDKTGEDQARSLEC-GKESQAAASSNGPIFSKEEDNVGDTEVALTTGHSQLFQNLGKEA 579
Query: 593 APVVVPGKEEQQAPVSSVKSDQEVECGLLRTQQQSDFPADRGKSVAPQVSACDAVQVKKP 652
V KEEQQ V VKSDQ + + + SD AD+GK+VA D Q K P
Sbjct: 580 TSTDVATKEEQQTDVFPVKSDQGADSSTQKNPR-SDSTADKGKAVA-----SDGSQSKVP 633
Query: 653 AQATTALQPKDVGAARKYHGPLFDFPFFTRKHDSVGSTAMVNSSNNLTLAYDVKDLLSEE 712
QA + PKD +ARKY+GPLFDFPFFTRK DS GS A N++NNLTLAYD+KDL+ EE
Sbjct: 634 PQANSPQPPKDTASARKYYGPLFDFPFFTRKLDSYGS-ATANANNNLTLAYDIKDLICEE 692
Query: 713 GLEVLQKKRSENLKKISGILAVNLERKRIRPDLVLRLQIEQKKLRLLDLQSRLRDEVDQQ 772
G E L KKR+++LKKI+G+LA NLERKRIRPDLVLRLQIE+KKLRL DLQSR+R+EVD+Q
Sbjct: 693 GAEFLSKKRTDSLKKINGLLAKNLERKRIRPDLVLRLQIEEKKLRLSDLQSRVREEVDRQ 752
Query: 773 QQEIMAMPDRQYRKFVRLCERQRVELMRQVQTSQKAMREKQLKSISQWRKKLLEAHWAIR 832
QQEIM+MPDR YRKFVRLCERQR+E+ RQV +QKA+REKQLK+I QWRKKLLEAHWAIR
Sbjct: 753 QQEIMSMPDRPYRKFVRLCERQRLEMNRQVLANQKAVREKQLKTIFQWRKKLLEAHWAIR 812
Query: 833 DARTARNRGVAKYHERILREFSKRKDDDRNKRMEALKNNDVERYREMLLEQQTSIPGDAA 892
DARTARNRGVAKYHE++LREFSKRKDD RNKRMEALKNNDVERYREMLLEQQT++PGDAA
Sbjct: 813 DARTARNRGVAKYHEKMLREFSKRKDDGRNKRMEALKNNDVERYREMLLEQQTNMPGDAA 872
Query: 893 ERYAVLSSFLTQTEEYLYKLGSKITAAKNQQEVEEAANAAAAAARLQGLSEEEVRSAAAC 952
ERYAVLSSFLTQTE+YL+KLG KITA KNQQEVEEAANAAA AARLQGLSEEEVR+AA C
Sbjct: 873 ERYAVLSSFLTQTEDYLHKLGGKITATKNQQEVEEAANAAAVAARLQGLSEEEVRAAATC 932
Query: 953 AGEEVMIRNRFLEMNAPRDGSSVNKYYSLAHAVNERVMRQPSMLRAGTLRDYQIVGLQWM 1012
A EEV+IRNRF EMNAP++ SSVNKYY+LAHAVNE V+RQPSML+AGTLRDYQ+VGLQWM
Sbjct: 933 AREEVVIRNRFTEMNAPKENSSVNKYYTLAHAVNEVVVRQPSMLQAGTLRDYQLVGLQWM 992
Query: 1013 LSLYNNKLNGILADEMGLGKTVQVMALIAYLMEFKGNYGPHLIIVPNAVLVNWKSELHKW 1072
LSLYNNKLNGILADEMGLGKTVQVMALIAYLMEFKGNYGPHLIIVPNAVLVNWKSELH W
Sbjct: 993 LSLYNNKLNGILADEMGLGKTVQVMALIAYLMEFKGNYGPHLIIVPNAVLVNWKSELHTW 1052
Query: 1073 LPSVSCIYYVGAKDQRSRLFSQEVAALKFNVLVTTYEFIMYDRSKLSKVDWKYIIIDEAQ 1132
LPSVSCIYYVG KDQRS+LFSQEV A+KFNVLVTTYEFIMYDRSKLSKVDWKYIIIDEAQ
Sbjct: 1053 LPSVSCIYYVGTKDQRSKLFSQEVCAMKFNVLVTTYEFIMYDRSKLSKVDWKYIIIDEAQ 1112
Query: 1133 RMKDRESVLARDLDRYRCQRRLLLTGTPLQNDLKELWSLLNLLLPEVFDNRKAFHDWFSQ 1192
RMKDRESVLARDLDRYRCQRRLLLTGTPLQNDLKELWSLLNLLLP+VFDNRKAFHDWF+Q
Sbjct: 1113 RMKDRESVLARDLDRYRCQRRLLLTGTPLQNDLKELWSLLNLLLPDVFDNRKAFHDWFAQ 1172
Query: 1193 PFQKEGPTHNADDDWLETEKKVIIIHRLHQILEPFMLRRRVEDVEGSLPPKVSIVLRCRM 1252
PFQKEGP HN +DDWLETEKKVI+IHRLHQILEPFMLRRRVEDVEGSLP KVS+VLRCRM
Sbjct: 1173 PFQKEGPAHNIEDDWLETEKKVIVIHRLHQILEPFMLRRRVEDVEGSLPAKVSVVLRCRM 1232
Query: 1253 SAIQSAIYDWIKATGTLRVDPEDEKRRVQKNPIYQAKVYKTLNNRCMELRKTCNHPLLNY 1312
SAIQSA+YDWIKATGTLRVDP+DEK R QKNPIYQAK+Y+TLNNRCMELRK CNHPLLNY
Sbjct: 1233 SAIQSAVYDWIKATGTLRVDPDDEKLRAQKNPIYQAKIYRTLNNRCMELRKACNHPLLNY 1292
Query: 1313 PYFSDLSKDFLVKSCGKLWILDRILIKLQRTGHRVLLFSTMTKLLDILEEYLQWRQLVYR 1372
PYF+D SKDFLV+SCGKLWILDRILIKLQRTGHRVLLFSTMTKLLDILEEYLQWR+LVYR
Sbjct: 1293 PYFNDFSKDFLVRSCGKLWILDRILIKLQRTGHRVLLFSTMTKLLDILEEYLQWRRLVYR 1352
Query: 1373 RIDGTTSLEDRESAIVDFNSHDSDCFIFLLSIRAAGRGLNLQSADTVIIYDPDPNPKNEE 1432
RIDGTTSLEDRESAIVDFN D+DCFIFLLSIRAAGRGLNLQ+ADTV+IYDPDPNPKNEE
Sbjct: 1353 RIDGTTSLEDRESAIVDFNDPDTDCFIFLLSIRAAGRGLNLQTADTVVIYDPDPNPKNEE 1412
Query: 1433 QAVARAHRIGQKREVKVIYMEAVVDKISSHQKEDELRSGGTVDLEDDLAGKDRYIGSIEG 1492
QAVARAHRIGQ REVKVIYMEAVV+K+SSHQKEDELRSGG+VDLEDD+AGKDRYIGSIEG
Sbjct: 1413 QAVARAHRIGQTREVKVIYMEAVVEKLSSHQKEDELRSGGSVDLEDDMAGKDRYIGSIEG 1472
Query: 1493 LIRNNIQQYKIDMADEVINAGRFDQRTTHEERRMTLETLLHDEERYQETVHDVPSLQEVN 1552
LIRNNIQQYKIDMADEVINAGRFDQRTTHEERRMTLETLLHDEERYQETVHDVPSL EVN
Sbjct: 1473 LIRNNIQQYKIDMADEVINAGRFDQRTTHEERRMTLETLLHDEERYQETVHDVPSLHEVN 1532
Query: 1553 RMIARSEDEVELFDQMDEEFGWIEEMTRYDQVPKWLRASTKEVNATIANLSKKPSKNILF 1612
RMIARSE+EVELFDQMDEEF W EEMT ++QVPKWLRAST+EVNAT+A+LSKKPSKN+L
Sbjct: 1533 RMIARSEEEVELFDQMDEEFDWTEEMTNHEQVPKWLRASTREVNATVADLSKKPSKNMLS 1592
Query: 1613 GSNIGVDSGEIETERKRG-PKGKKYPNYKEVDDEIGEYSEASSDERNGYPVQEEEGEIGE 1671
SN+ V G ERKRG PK KK NYKE++D+I YSE SS+ERN EEEG+I +
Sbjct: 1593 SSNLIVQPGGPGGERKRGRPKSKKI-NYKEIEDDIAGYSEESSEERNIDSGNEEEGDIRQ 1651
Query: 1672 FEDDEYSGAVGAPLSNKDQSEEDGPVCEGGYDYLRPSENTRNNHVVEEAGSSGSSSNSRR 1731
F+DDE +GA+G +NK + + + PVC GYDY S + + N ++AGSSGSS S R
Sbjct: 1652 FDDDELTGALGDHQTNKGEFDGENPVC--GYDYPPGSGSYKKNPPRDDAGSSGSSPESHR 1709
Query: 1732 LTQIVSPVSPQKFGSLSALEARPGSLSKRMPDELEEGEIAVSGDSHMDHQQSGSWTHDRD 1791
++ SPVS QKFGSLSAL+ RPGS+SKR+ D+LEEGEIA SGDSH+D Q+SGSW HDRD
Sbjct: 1710 SKEMASPVSSQKFGSLSALDTRPGSVSKRLLDDLEEGEIAASGDSHIDLQRSGSWAHDRD 1769
Query: 1792 EGEDEQVLQPKIKRKRSIRVRPRHTVERPEERSCTDTPLHRGDSSLLPFQMDNKYPAQLR 1851
EG++EQVLQP IKRKRSIR+RPR T ER + ++ P + P Q+D Y ++LR
Sbjct: 1770 EGDEEQVLQPTIKRKRSIRLRPRQTAERVD---GSEMP------AAQPLQVDRSYRSKLR 1820
Query: 1852 TDTEMKAHGESNSLRHDQSEPSSKSRRNLPSRKIANAPKSR-ASLKTGRLNCMPGHTEDA 1910
T + +H SS R++P++K+A+ K +S K+GRLN ED
Sbjct: 1821 TVVD--SHSSRQD-----QSDSSSRLRSVPAKKVASTSKLHVSSPKSGRLNATQLTVEDN 1873
Query: 1911 ADHFKESWDGKIANASGSSNFSAKMSDVIQRRVCTVSL 1948
A+ +E+WDG + SSN A+MS +IQ+R C + +
Sbjct: 1874 AEASRETWDG--TSPISSSNAGARMSHIIQKR-CKIVI 1908
>sp|O94421|SNF22_SCHPO SWI/SNF chromatin-remodeling complex subunit snf22
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=snf22 PE=1 SV=2
Length = 1680
Score = 517 bits (1331), Expect = e-145, Method: Compositional matrix adjust.
Identities = 307/843 (36%), Positives = 462/843 (54%), Gaps = 112/843 (13%)
Query: 751 IEQKKLRLLDLQSRLRDEVDQQQQEIMAMPDRQYRKFVRLCERQRVE------LMRQVQT 804
IE + LRLL+ Q LR+ ++ ++ R R +RQ ++ + + Q
Sbjct: 646 IELRCLRLLEKQRSLRETINSVIPHSDSLAAGNLRLMFRNVKRQTMQEANLVLALAEKQK 705
Query: 805 SQKAMREKQ-----LKSISQWRKKLLEAHWAIRDARTARNRGVAKYHERILREFSKRKDD 859
++ AMR+K+ L+SI RK ++ A+T R + + +H + +E KR +
Sbjct: 706 TEHAMRQKEKLLTHLRSIMLHRKSIVTKVDKQNKAKTQRCKDIINFHAHLEKEEKKRIER 765
Query: 860 DRNKRMEALKNNDVERYREMLLEQQTSIPGDAAERYAVLSSFLTQTEEYLYKLGSKITAA 919
+R++AL+ +D Y ++L D A+ + + L QT++YL L +
Sbjct: 766 SARQRLQALRADDEAAYLQLL---------DKAKDTRI-THLLKQTDQYLENLTRAVRIQ 815
Query: 920 KNQQEVEEAANAAAAAARLQGLSEEEVRSAAACAGEEVMIRNRFLEMNAPRDGSSVNKYY 979
++ + + +A L+ EE ++ Y+
Sbjct: 816 QSNIHSGNTSGKGSNSAELEAPISEEDKNL---------------------------DYF 848
Query: 980 SLAHAVNERVMRQPSMLRAGTLRDYQIVGLQWMLSLYNNKLNGILADEMGLGKTVQVMAL 1039
+AH ++E V QP + GTL+DYQ+ GL+WMLSLYNN LNGILADEMGLGKT+Q +A
Sbjct: 849 KVAHRIHEEV-EQPKIFVGGTLKDYQLKGLEWMLSLYNNNLNGILADEMGLGKTIQTIAF 907
Query: 1040 IAYLMEFKGNYGPHLIIVPNAVLVNWKSELHKWLPSVSCIYYVGAKDQRSRLFSQEVAAL 1099
I YL+E K GP LIIVP + L NW E KW PSV I Y G R L SQ + +
Sbjct: 908 ITYLIEKKNQQGPFLIIVPLSTLTNWIMEFEKWAPSVKKIAYKGPPQLRKTLQSQ-IRSS 966
Query: 1100 KFNVLVTTYEFIMYDRSKLSKVDWKYIIIDEAQRMKDRESVLARDLDRY-RCQRRLLLTG 1158
FNVL+TT+E+I+ DR LS++ W ++IIDE R+K+ +S L L Y Q RL+LTG
Sbjct: 967 NFNVLLTTFEYIIKDRPLLSRIKWVHMIIDEGHRIKNTQSKLTSTLSTYYHSQYRLILTG 1026
Query: 1159 TPLQNDLKELWSLLNLLLPEVFDNRKAFHDWFSQPFQKEGPTHNADDDWLETEKKVIIIH 1218
TPLQN+L ELW+LLN +LP++F++ K+F +WF+ PF G D L E+ ++II
Sbjct: 1027 TPLQNNLPELWALLNFVLPKIFNSIKSFDEWFNTPFANTG---GQDKIGLNEEEALLIIK 1083
Query: 1219 RLHQILEPFMLRRRVEDVEGSLPPKVSIVLRCRMSAIQSAIYDWIKATGTLRVDPEDEKR 1278
RLH++L PF+ RR +DVE LP KV V++C +S +Q +Y +K G L VD E K
Sbjct: 1084 RLHKVLRPFLFRRLKKDVEKELPDKVEKVIKCPLSGLQLKLYQQMKKHGMLFVDGEKGKT 1143
Query: 1279 RVQKNPIYQAKVYKTLNNRCMELRKTCNHPLLNYPYFSDLSK---------DFLVKSCGK 1329
+ K L N M+L+K CNHP + F D+ + D L ++ GK
Sbjct: 1144 GI-----------KGLQNTVMQLKKICNHPFI----FEDVERAIDPSGTNVDLLWRAAGK 1188
Query: 1330 LWILDRILIKLQRTGHRVLLFSTMTKLLDILEEYLQWRQLVYRRIDGTTSLEDRESAIVD 1389
+LDRIL KL TGH+ L+F MT+++ I+E+YL+ + Y R+DG+T +DR S +
Sbjct: 1189 FELLDRILPKLFLTGHKTLMFFQMTQIMTIMEDYLRSKNWKYLRLDGSTKSDDRCSLLAQ 1248
Query: 1390 FNSHDSDCFIFLLSIRAAGRGLNLQSADTVIIYDPDPNPKNEEQAVARAHRIGQKREVKV 1449
FN SD +IF+LS RA G GLNLQ+ADTVII+D D NP + QA RAHRIGQ +EV++
Sbjct: 1249 FNDPKSDVYIFMLSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQTKEVRI 1308
Query: 1450 IYMEAVVDKISSHQKEDELRSGGTVDLEDDLAGKDRYIGSIEGLIRNNIQQYKIDMADEV 1509
+ + + +K +E+++ + QYK+D+ +V
Sbjct: 1309 LRL--ITEK----------------SIEENILSR---------------AQYKLDLDGKV 1335
Query: 1510 INAGRFDQRTTHEERRMTLETLL-HDEERYQETVHDVPSLQEVNRMIARSEDEVELFDQM 1568
I AG+FD ++T EER L +LL HD + + + E+N +I+R+++E+ LF ++
Sbjct: 1336 IQAGKFDNKSTPEEREAFLRSLLEHDGDDDHDLTYGELQDDELNELISRTDEELVLFKKL 1395
Query: 1569 DEE 1571
D+E
Sbjct: 1396 DKE 1398
>sp|P25439|BRM_DROME ATP-dependent helicase brm OS=Drosophila melanogaster GN=brm PE=1
SV=2
Length = 1638
Score = 500 bits (1288), Expect = e-140, Method: Compositional matrix adjust.
Identities = 272/641 (42%), Positives = 382/641 (59%), Gaps = 73/641 (11%)
Query: 978 YYSLAHAVNERVMRQPSMLRAGTLRDYQIVGLQWMLSLYNNKLNGILADEMGLGKTVQVM 1037
YYS+AH ++E+V+ Q S++ GTL++YQI GL+W++SLYNN LNGILADEMGLGKT+Q +
Sbjct: 750 YYSIAHTIHEKVVEQASIMVNGTLKEYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTI 809
Query: 1038 ALIAYLMEFKGNYGPHLIIVPNAVLVNWKSELHKWLPSVSCIYYVGAKDQRSRLFSQEVA 1097
+L+ YLM+ K GP+LIIVP + L NW E KW P+V + Y G+ R RL ++
Sbjct: 810 SLVTYLMDRKKVMGPYLIIVPLSTLPNWVLEFEKWAPAVGVVSYKGSPQGR-RLLQNQMR 868
Query: 1098 ALKFNVLVTTYEFIMYDRSKLSKVDWKYIIIDEAQRMKDRESVLARDLD-RYRCQRRLLL 1156
A KFNVL+TTYE+++ D++ L+K+ WKY+IIDE RMK+ L + L+ Y RLLL
Sbjct: 869 ATKFNVLLTTYEYVIKDKAVLAKIQWKYMIIDEGHRMKNHHCKLTQVLNTHYIAPYRLLL 928
Query: 1157 TGTPLQNDLKELWSLLNLLLPEVFDNRKAFHDWFSQPFQKEGPTHNADDDWLETEKKVII 1216
TGTPLQN L ELW+LLN LLP +F + F WF+ PF G + L E+ ++I
Sbjct: 929 TGTPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTG-----EKVELNEEETILI 983
Query: 1217 IHRLHQILEPFMLRRRVEDVEGSLPPKVSIVLRCRMSAIQSAIYDWIKATGTLRVDPEDE 1276
I RLH++L PF+LRR ++VE LP KV +++C MSA+Q +Y +++ G L D ++
Sbjct: 984 IRRLHKVLRPFLLRRLKKEVEHQLPDKVEYIIKCDMSALQRVLYKHMQSKGVLLTDGSEK 1043
Query: 1277 KRRVQKNPIYQAKVYKTLNNRCMELRKTCNHPLLNYPYFSDLSKDF-------------- 1322
+ K L N ++LRK CNHP + F + + +
Sbjct: 1044 GKH-------GKGGAKALMNTIVQLRKLCNHPFM----FQHIEEKYCDHTGGHGVVSGPD 1092
Query: 1323 LVKSCGKLWILDRILIKLQRTGHRVLLFSTMTKLLDILEEYLQWRQLVYRRIDGTTSLED 1382
L + GK +LDRIL KL+ T HRVLLF MT+ + I+E+YL WRQ Y R+DGTT ED
Sbjct: 1093 LYRVSGKFELLDRILPKLKATNHRVLLFCQMTQCMTIIEDYLGWRQFGYLRLDGTTKAED 1152
Query: 1383 RESAIVDFNSHDSDCFIFLLSIRAAGRGLNLQSADTVIIYDPDPNPKNEEQAVARAHRIG 1442
R + FN+ SD F+FLLS RA G GLNLQ+ADTV+I+D D NP + QA RAHRIG
Sbjct: 1153 RGELLRKFNAKGSDVFVFLLSTRAGGLGLNLQTADTVVIFDSDWNPHQDLQAQDRAHRIG 1212
Query: 1443 QKREVKVIYMEAVVDKISSHQKEDELRSGGTVDLEDDLAGKDRYIGSIEGLIRNNIQQYK 1502
Q+ EV+V+ + V S+E I +YK
Sbjct: 1213 QRNEVRVLRLMTV--------------------------------NSVEERIL-AAARYK 1239
Query: 1503 IDMADEVINAGRFDQRTTHEERRMTLETLLHDEERYQETVHDVPSLQEVNRMIARSEDEV 1562
++M ++VI AG FDQ++T ER+ L+T+LH ++ +E ++VP + +N MIARSE+E+
Sbjct: 1240 LNMDEKVIQAGMFDQKSTGSERQQFLQTILHQDDNEEEEENEVPDDEMINMMIARSEEEI 1299
Query: 1563 ELFDQMDEE--------FGWIEEMTRYDQVPKWLRASTKEV 1595
E+F +MD E E + ++P WL EV
Sbjct: 1300 EIFKRMDAERKKEDEEIHPGRERLIDESELPDWLTKDDDEV 1340
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 95/194 (48%), Gaps = 27/194 (13%)
Query: 744 DLVLRLQIEQKKLRLLDLQSRLRDEVDQQQQEIMAMPDRQYRKFVRLCERQRVELMRQVQ 803
DL L+ IE + LR+L+ Q +LR E Q + + + ++L +R + + +R+ +
Sbjct: 436 DLRLQAAIELRALRVLNFQRQLRMEFVQCTRRDTTL---ETALNIKLYKRTKRQGLREAR 492
Query: 804 TSQKAMREKQLKSISQWRKKLLEAHWAI-------------RDARTAR-NRGVAKYHERI 849
++K ++++L++ + R+K LE A+ A+ AR N+ V +H
Sbjct: 493 ATEKLEKQQKLEAERKRRQKHLEFLAAVLQHGKDLREFHRNNKAQLARMNKAVMNHHANA 552
Query: 850 LREFSKRKDDDRNKRMEALKNNDVERYREMLLEQQTSIPGDAAERYAVLSSFLTQTEEYL 909
RE K ++ +RM L D E YR+++ +++ +R A L L+QT+EY+
Sbjct: 553 EREQKKEQERIEKERMRRLMAEDEEGYRKLIDQKKD-------KRLAFL---LSQTDEYI 602
Query: 910 YKLGSKITAAKNQQ 923
L + K+ Q
Sbjct: 603 SNLTQMVKQHKDDQ 616
>sp|Q9UTN6|SNF21_SCHPO Chromatin structure-remodeling complex subunit snf21
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=snf21 PE=1 SV=1
Length = 1199
Score = 496 bits (1276), Expect = e-138, Method: Compositional matrix adjust.
Identities = 327/846 (38%), Positives = 464/846 (54%), Gaps = 120/846 (14%)
Query: 751 IEQKKLRLLDLQSRLRDEVDQQQQEIMAMPDRQYRKFVRLCER-----QRVELMRQVQTS 805
+E KKLRL+ Q LR +V Q + + + R C R Q L ++
Sbjct: 199 VELKKLRLIKQQESLRHQVMHCQPHLRTIVNAVERMS---CRRPKLVPQATRLTEVLERQ 255
Query: 806 QKAMREKQLKSISQWRKKLLEAHWAIRDART----AR----NRGVAKYHERILREFSKRK 857
Q++ RE++LK + + AH + RT AR NR V YH I +E +R
Sbjct: 256 QRSDRERRLKQKQCDYLQTVCAHGREINVRTKNAQARAQKANRAVLAYHSHIEKEEQRRA 315
Query: 858 DDDRNKRMEALKNNDVERYREMLLEQQTSIPGDAAERYAVLSSFLTQTEEYLYKLGSKIT 917
+ + +R++ALK ND E Y +++ D A+ + + L QT+ YL
Sbjct: 316 ERNAKQRLQALKENDEEAYLKLI---------DQAKDTRI-THLLRQTDHYL-------- 357
Query: 918 AAKNQQEVEEAANAAAAAARLQGLSEEEVRSAAACAGEEVMIRNRFLEMNAPRDGSSVNK 977
++ AAA ++Q A +E M R MN P D ++
Sbjct: 358 ------------DSLAAAVKVQQ------SQFGESAYDEDMDRR----MN-PEDDRKID- 393
Query: 978 YYSLAHAVNERVMRQPSMLRAGTLRDYQIVGLQWMLSLYNNKLNGILADEMGLGKTVQVM 1037
YY++AH + E V QPS+L G L++YQ+ GLQWM+SLYNN LNGILADEMGLGKT+Q +
Sbjct: 394 YYNVAHNIREVVTEQPSILVGGKLKEYQLRGLQWMISLYNNHLNGILADEMGLGKTIQTI 453
Query: 1038 ALIAYLMEFKGNYGPHLIIVPNAVLVNWKSELHKWLPSVSCIYYVGAKDQRSRLFSQEVA 1097
+LI +L+E K GP L+IVP + L NW E +W PS+ I Y G R L Q V
Sbjct: 454 SLITHLIEKKRQNGPFLVIVPLSTLTNWTMEFERWAPSIVKIVYKGPPQVRKALHPQ-VR 512
Query: 1098 ALKFNVLVTTYEFIMYDRSKLSKVDWKYIIIDEAQRMKDRESVLARDLDRYRCQR-RLLL 1156
F VL+TTYE+I+ DR LS++ W Y+IIDE RMK+ +S L L Y R RL+L
Sbjct: 513 HSNFQVLLTTYEYIIKDRPLLSRIKWIYMIIDEGHRMKNTQSKLTNTLTTYYSSRYRLIL 572
Query: 1157 TGTPLQNDLKELWSLLNLLLPEVFDNRKAFHDWFSQPFQKEGPTHNADDDWLETEKKVII 1216
TGTPLQN+L ELW+LLN +LP +F++ K+F +WF+ PF G D L E+ +++
Sbjct: 573 TGTPLQNNLPELWALLNFVLPRIFNSIKSFDEWFNTPFANTG---GQDKMELTEEESLLV 629
Query: 1217 IHRLHQILEPFMLRRRVEDVEGSLPPKVSIVLRCRMSAIQSAIYDWIKATGTLRVDPEDE 1276
I RLH++L PF+LRR +DVE LP KV V+RC+MS +Q +Y +K G L V ED
Sbjct: 630 IRRLHKVLRPFLLRRLKKDVEAELPDKVEKVIRCQMSGLQQKLYYQMKKHGMLYV--EDA 687
Query: 1277 KRRVQKNPIYQAKVYKTLNNRCMELRKTCNHPLLNYPYFSDLSK---------DFLVKSC 1327
KR K I K L N M+L+K CNHP + F D+ + D L +
Sbjct: 688 KR--GKTGI------KGLQNTVMQLKKICNHPFV----FEDVERSIDPTGFNYDMLWRVS 735
Query: 1328 GKLWILDRILIKLQRTGHRVLLFSTMTKLLDILEEYLQWRQLVYRRIDGTTSLEDRESAI 1387
GK +LDRIL KL R+GHR+L+F MT++++I+E+YL +RQ Y R+DG+T +DR +
Sbjct: 736 GKFELLDRILPKLFRSGHRILMFFQMTQIMNIMEDYLHYRQWRYLRLDGSTKADDRSKLL 795
Query: 1388 VDFNSHDSDCFIFLLSIRAAGRGLNLQSADTVIIYDPDPNPKNEEQAVARAHRIGQKREV 1447
FN ++ +FLLS RA G GLNLQ+ADTVII+D D NP + QA RAHRIGQ +EV
Sbjct: 796 GVFNDPTAEVNLFLLSTRAGGLGLNLQTADTVIIFDSDWNPHQDLQAQDRAHRIGQTKEV 855
Query: 1448 KVIYMEAVVDKISSHQKEDELRSGGTVDLEDDLAGKDRYIGSIEGLIRNNIQQYKIDMAD 1507
++ + + +K +E+++ + QYK+D+
Sbjct: 856 RIYRL--ITEK----------------SVEENILAR---------------AQYKLDIDG 882
Query: 1508 EVINAGRFDQRTTHEERRMTLETLLHDEERYQETVHDVP-SLQEVNRMIARSEDEVELFD 1566
+VI AG+FD ++T EER L +LL +E +E E+N ++AR +DE+ LF
Sbjct: 883 KVIQAGKFDNKSTPEEREAFLRSLLENENGEEENDEKGELDDDELNEILARGDDELRLFK 942
Query: 1567 QMDEEF 1572
QM E+
Sbjct: 943 QMTEDL 948
>sp|Q6DIC0|SMCA2_MOUSE Probable global transcription activator SNF2L2 OS=Mus musculus
GN=Smarca2 PE=1 SV=1
Length = 1577
Score = 484 bits (1247), Expect = e-135, Method: Compositional matrix adjust.
Identities = 268/608 (44%), Positives = 365/608 (60%), Gaps = 67/608 (11%)
Query: 978 YYSLAHAVNERVMRQPSMLRAGTLRDYQIVGLQWMLSLYNNKLNGILADEMGLGKTVQVM 1037
YY++AHA++ERV +Q ++L GTL+ YQ+ GL+WM+SLYNN LNGILADEMGLGKT+Q +
Sbjct: 706 YYTVAHAISERVEKQSALLINGTLKHYQLQGLEWMVSLYNNNLNGILADEMGLGKTIQTI 765
Query: 1038 ALIAYLMEFKGNYGPHLIIVPNAVLVNWKSELHKWLPSVSCIYYVGAKDQRSRLFSQEVA 1097
ALI YLME K GP+LIIVP + L NW E KW PSV I Y G R L Q +
Sbjct: 766 ALITYLMEHKRLNGPYLIIVPLSTLSNWTYEFDKWAPSVVKISYKGTPAMRRSLVPQ-LR 824
Query: 1098 ALKFNVLVTTYEFIMYDRSKLSKVDWKYIIIDEAQRMKDRESVLARDLD-RYRCQRRLLL 1156
+ KFNVL+TTYE+I+ D+ L+K+ WKY+I+DE RMK+ L + L+ Y RR+LL
Sbjct: 825 SGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRILL 884
Query: 1157 TGTPLQNDLKELWSLLNLLLPEVFDNRKAFHDWFSQPFQKEGPTHNADDDWLETEKKVII 1216
TGTPLQN L ELW+LLN LLP +F + F WF+ PF G D L E+ ++I
Sbjct: 885 TGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTG--ERVD---LNEEETILI 939
Query: 1217 IHRLHQILEPFMLRRRVEDVEGSLPPKVSIVLRCRMSAIQSAIYDWIKATGTLRVDPEDE 1276
I RLH++L PF+LRR ++VE LP KV V++C MSA+Q +Y ++A G L D ++
Sbjct: 940 IRRLHKVLRPFLLRRLKKEVESQLPEKVEYVIKCDMSALQKILYRHMQAKGILLTDGSEK 999
Query: 1277 KRRVQKNPIYQAKVYKTLNNRCMELRKTCNHPLLNYPYFSDLSKDF-------------- 1322
++ KTL N M+LRK CNHP + F + + F
Sbjct: 1000 DKK-------GKGGAKTLMNTIMQLRKICNHPYM----FQHIEESFAEHLGYSNGVINGA 1048
Query: 1323 -LVKSCGKLWILDRILIKLQRTGHRVLLFSTMTKLLDILEEYLQWRQLVYRRIDGTTSLE 1381
L ++ GK +LDRIL KL+ T HRVLLF MT L+ I+E+Y +R +Y R+DGTT E
Sbjct: 1049 ELYRASGKFELLDRILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRLDGTTKSE 1108
Query: 1382 DRESAIVDFNSHDSDCFIFLLSIRAAGRGLNLQSADTVIIYDPDPNPKNEEQAVARAHRI 1441
DR + + FN S FIFLLS RA G GLNLQ+ADTV+I+D D NP + QA RAHRI
Sbjct: 1109 DRAALLKKFNEPGSQYFIFLLSTRAGGLGLNLQAADTVVIFDSDWNPHQDLQAQDRAHRI 1168
Query: 1442 GQKREVKVIYMEAVVDKISSHQKEDELRSGGTVDLEDDLAGKDRYIGSIEGLIRNNIQQY 1501
GQ+ EV+V+ + V + E+++ + +Y
Sbjct: 1169 GQQNEVRVLRLCTV------NSVEEKILAAA---------------------------KY 1195
Query: 1502 KIDMADEVINAGRFDQRTTHEERRMTLETLLHDEERYQETVHDVPSLQEVNRMIARSEDE 1561
K+++ +VI AG FDQ+++ ERR L+ +L EE +E + +N+MIAR E+E
Sbjct: 1196 KLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEENEEEDEVP-DDETLNQMIARREEE 1254
Query: 1562 VELFDQMD 1569
+LF +MD
Sbjct: 1255 FDLFMRMD 1262
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 87/192 (45%), Gaps = 21/192 (10%)
Query: 743 PDLVLRLQIEQKKLRLLDLQSRLRDEV----DQQQQEIMAMPDRQYRKFVRLCERQ---- 794
PDL + +E K LRLL+ Q +LR EV + A+ + Y++ R R+
Sbjct: 375 PDLRTKATVELKALRLLNFQRQLRQEVVACMRRDTTLETALNSKAYKRSKRQTLREARMT 434
Query: 795 -RVELMRQVQTSQKAMREKQ--LKSISQWRKKLLEAHWAIRDARTARNRGVAKYHERILR 851
++E ++++ +K ++ Q L SI Q K E H ++ ++ VA +H R
Sbjct: 435 EKLEKQQKIEQERKRRQKHQEYLNSILQHAKDFKEYHRSVAGKIQKLSKAVATWHANTER 494
Query: 852 EFSKRKDDDRNKRMEALKNNDVERYREMLLEQQTSIPGDAAERYAVLSSFLTQTEEYLYK 911
E K + +RM L D E YR+++ +++ L+ L QT+EY+
Sbjct: 495 EQKKETERIEKERMRRLMAEDEEGYRKLIDQKKDR----------RLAYLLQQTDEYVAN 544
Query: 912 LGSKITAAKNQQ 923
L + + K Q
Sbjct: 545 LTNLVWEHKQAQ 556
>sp|P51531|SMCA2_HUMAN Probable global transcription activator SNF2L2 OS=Homo sapiens
GN=SMARCA2 PE=1 SV=2
Length = 1590
Score = 484 bits (1246), Expect = e-135, Method: Compositional matrix adjust.
Identities = 270/608 (44%), Positives = 364/608 (59%), Gaps = 67/608 (11%)
Query: 978 YYSLAHAVNERVMRQPSMLRAGTLRDYQIVGLQWMLSLYNNKLNGILADEMGLGKTVQVM 1037
YY++AHA++ERV +Q ++L GTL+ YQ+ GL+WM+SLYNN LNGILADEMGLGKT+Q +
Sbjct: 701 YYTVAHAISERVEKQSALLINGTLKHYQLQGLEWMVSLYNNNLNGILADEMGLGKTIQTI 760
Query: 1038 ALIAYLMEFKGNYGPHLIIVPNAVLVNWKSELHKWLPSVSCIYYVGAKDQRSRLFSQEVA 1097
ALI YLME K GP+LIIVP + L NW E KW PSV I Y G R L Q +
Sbjct: 761 ALITYLMEHKRLNGPYLIIVPLSTLSNWTYEFDKWAPSVVKISYKGTPAMRRSLVPQ-LR 819
Query: 1098 ALKFNVLVTTYEFIMYDRSKLSKVDWKYIIIDEAQRMKDRESVLARDLD-RYRCQRRLLL 1156
+ KFNVL+TTYE+I+ D+ L+K+ WKY+I+DE RMK+ L + L+ Y RR+LL
Sbjct: 820 SGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRILL 879
Query: 1157 TGTPLQNDLKELWSLLNLLLPEVFDNRKAFHDWFSQPFQKEGPTHNADDDWLETEKKVII 1216
TGTPLQN L ELW+LLN LLP +F + F WF+ PF G D L E+ ++I
Sbjct: 880 TGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTG--ERVD---LNEEETILI 934
Query: 1217 IHRLHQILEPFMLRRRVEDVEGSLPPKVSIVLRCRMSAIQSAIYDWIKATGTLRVDPEDE 1276
I RLH++L PF+LRR ++VE LP KV V++C MSA+Q +Y ++A G L D ++
Sbjct: 935 IRRLHKVLRPFLLRRLKKEVESQLPEKVEYVIKCDMSALQKILYRHMQAKGILLTDGSEK 994
Query: 1277 KRRVQKNPIYQAKVYKTLNNRCMELRKTCNHPLLNYPYFSDLSKDF-------------- 1322
++ KTL N M+LRK CNHP + F + + F
Sbjct: 995 DKK-------GKGGAKTLMNTIMQLRKICNHPYM----FQHIEESFAEHLGYSNGVINGA 1043
Query: 1323 -LVKSCGKLWILDRILIKLQRTGHRVLLFSTMTKLLDILEEYLQWRQLVYRRIDGTTSLE 1381
L ++ GK +LDRIL KL+ T HRVLLF MT L+ I+E+Y +R +Y R+DGTT E
Sbjct: 1044 ELYRASGKFELLDRILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRLDGTTKSE 1103
Query: 1382 DRESAIVDFNSHDSDCFIFLLSIRAAGRGLNLQSADTVIIYDPDPNPKNEEQAVARAHRI 1441
DR + + FN S FIFLLS RA G GLNLQ+ADTV+I+D D NP + QA RAHRI
Sbjct: 1104 DRAALLKKFNEPGSQYFIFLLSTRAGGLGLNLQAADTVVIFDSDWNPHQDLQAQDRAHRI 1163
Query: 1442 GQKREVKVIYMEAVVDKISSHQKEDELRSGGTVDLEDDLAGKDRYIGSIEGLIRNNIQQY 1501
GQ+ EV+V+ + V+ + E LA +Y
Sbjct: 1164 GQQNEVRVLRL-CTVNSVE----------------EKILAAA----------------KY 1190
Query: 1502 KIDMADEVINAGRFDQRTTHEERRMTLETLLHDEERYQETVHDVPSLQEVNRMIARSEDE 1561
K+++ +VI AG FDQ+++ ERR L+ +L EE +E + +N+MIAR E+E
Sbjct: 1191 KLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEENEEEDEVP-DDETLNQMIARREEE 1249
Query: 1562 VELFDQMD 1569
+LF +MD
Sbjct: 1250 FDLFMRMD 1257
>sp|A7Z019|SMCA4_BOVIN Transcription activator BRG1 OS=Bos taurus GN=SMARCA4 PE=2 SV=1
Length = 1606
Score = 483 bits (1244), Expect = e-135, Method: Compositional matrix adjust.
Identities = 276/645 (42%), Positives = 375/645 (58%), Gaps = 75/645 (11%)
Query: 975 VNKYYSLAHAVNERVMRQPSMLRAGTLRDYQIVGLQWMLSLYNNKLNGILADEMGLGKTV 1034
+ YY++AHAV ERV +Q +++ G L+ YQI GL+W++SLYNN LNGILADEMGLGKT+
Sbjct: 720 LQSYYAVAHAVTERVDKQSALMVNGVLKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTI 779
Query: 1035 QVMALIAYLMEFKGNYGPHLIIVPNAVLVNWKSELHKWLPSVSCIYYVGAKDQRSRLFSQ 1094
Q +ALI YLME K GP LIIVP + L NW E KW PSV + Y G+ R R F
Sbjct: 780 QTIALITYLMEHKRINGPFLIIVPLSTLSNWAYEFDKWAPSVVKVSYKGSPAAR-RAFVP 838
Query: 1095 EVAALKFNVLVTTYEFIMYDRSKLSKVDWKYIIIDEAQRMKDRESVLARDLD-RYRCQRR 1153
++ + KFNVL+TTYE+I+ D+ L+K+ WKY+I+DE RMK+ L + L+ Y RR
Sbjct: 839 QLRSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRR 898
Query: 1154 LLLTGTPLQNDLKELWSLLNLLLPEVFDNRKAFHDWFSQPFQKEGPTHNADDDWLETEKK 1213
LLLTGTPLQN L ELW+LLN LLP +F + F WF+ PF G + L E+
Sbjct: 899 LLLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVD-----LNEEET 953
Query: 1214 VIIIHRLHQILEPFMLRRRVEDVEGSLPPKVSIVLRCRMSAIQSAIYDWIKATGTLRVDP 1273
++II RLH++L PF+LRR ++VE LP KV V++C MSA+Q +Y ++A G L D
Sbjct: 954 ILIIRRLHKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVLLTDG 1013
Query: 1274 EDEKRRVQKNPIYQAKVYKTLNNRCMELRKTCNHPLLNYPYFSDLSKDF----------- 1322
++ ++ KTL N M+LRK CNHP + F + + F
Sbjct: 1014 SEKDKK-------GKGGTKTLMNTIMQLRKICNHPYM----FQHIEESFSEHLGFTGGIV 1062
Query: 1323 ----LVKSCGKLWILDRILIKLQRTGHRVLLFSTMTKLLDILEEYLQWRQLVYRRIDGTT 1378
L ++ GK +LDRIL KL+ T H+VLLF MT L+ I+E+Y +R Y R+DGTT
Sbjct: 1063 QGLDLYRASGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTT 1122
Query: 1379 SLEDRESAIVDFNSHDSDCFIFLLSIRAAGRGLNLQSADTVIIYDPDPNPKNEEQAVARA 1438
EDR + FN S+ FIFLLS RA G GLNLQSADTVII+D D NP + QA RA
Sbjct: 1123 KAEDRGMLLKTFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRA 1182
Query: 1439 HRIGQKREVKVIYMEAVVDKISSHQKEDELRSGGTVDLEDDLAGKDRYIGSIEGLIRNNI 1498
HRIGQ+ EV+V+ + V+ + E LA
Sbjct: 1183 HRIGQQNEVRVLRL-CTVNSVE----------------EKILAAA--------------- 1210
Query: 1499 QQYKIDMADEVINAGRFDQRTTHEERRMTLETLLHDEERYQETVHDVPSLQEVNRMIARS 1558
+YK+++ +VI AG FDQ+++ ERR L+ +L EE+ +E + VN+MIAR
Sbjct: 1211 -KYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEQDEEEDEVP-DDETVNQMIARH 1268
Query: 1559 EDEVELFDQMDEEFGWIE--------EMTRYDQVPKWLRASTKEV 1595
E+E +LF +MD + E + D++P W+ EV
Sbjct: 1269 EEEFDLFMRMDLDRRREEARNPKRKPRLMEEDELPSWIIKDDAEV 1313
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 78/180 (43%), Gaps = 21/180 (11%)
Query: 744 DLVLRLQIEQKKLRLLDLQSRLRDEVDQQQQEIMAMPDRQYRKFVRLCERQRVELMR--- 800
DL + IE K LRLL+ Q +LR EV + A+ K + +RQ + R
Sbjct: 387 DLRTKATIELKALRLLNFQRQLRQEVVVCMRRDTALETALNAKAYKRSKRQSLREARITE 446
Query: 801 QVQTSQKAMREKQ--------LKSISQWRKKLLEAHWAIRDARTARNRGVAKYHERILRE 852
+++ QK +E++ L SI Q K E H ++ + VA YH RE
Sbjct: 447 KLEKQQKIEQERKRRQKHQEYLNSILQHAKDFKEYHRSVTGKIQKLTKAVATYHANTERE 506
Query: 853 FSKRKDDDRNKRMEALKNNDVERYREMLLEQQTSIPGDAAERYAVLSSFLTQTEEYLYKL 912
K + +RM L D E YR+++ +++ L+ L QT+EY+ L
Sbjct: 507 QKKENERIEKERMRRLMAEDEEGYRKLIDQKKDK----------RLAYLLQQTDEYVANL 556
Score = 35.0 bits (79), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 39/74 (52%), Gaps = 11/74 (14%)
Query: 444 SAIPSSDGSSANNFSSQGGLAT-------QMPQQRLG---FTKHQLHVLKAQILAFRRLK 493
S +P+S SS SS G A + QQ G F ++QLH L+AQI+A++ L
Sbjct: 132 SPVPASGPSSGPQMSSGPGGAPLDGADPQALGQQNRGPTPFNQNQLHQLRAQIMAYKMLA 191
Query: 494 KGEGTLPQELLRAI 507
+G+ LP L A+
Sbjct: 192 RGQ-PLPDHLQMAV 204
>sp|Q8K1P7|SMCA4_RAT Transcription activator BRG1 OS=Rattus norvegicus GN=Smarca4 PE=1
SV=1
Length = 1613
Score = 483 bits (1242), Expect = e-135, Method: Compositional matrix adjust.
Identities = 276/645 (42%), Positives = 375/645 (58%), Gaps = 75/645 (11%)
Query: 975 VNKYYSLAHAVNERVMRQPSMLRAGTLRDYQIVGLQWMLSLYNNKLNGILADEMGLGKTV 1034
+ YY++AHAV ERV +Q +++ G L+ YQI GL+W++SLYNN LNGILADEMGLGKT+
Sbjct: 728 LQSYYAVAHAVTERVDKQSALMVNGVLKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTI 787
Query: 1035 QVMALIAYLMEFKGNYGPHLIIVPNAVLVNWKSELHKWLPSVSCIYYVGAKDQRSRLFSQ 1094
Q +ALI YLME K GP LIIVP + L NW E KW PSV + Y G+ R R F
Sbjct: 788 QTIALITYLMEHKRINGPFLIIVPLSTLSNWAYEFDKWAPSVVKVSYKGSPAAR-RAFVP 846
Query: 1095 EVAALKFNVLVTTYEFIMYDRSKLSKVDWKYIIIDEAQRMKDRESVLARDLD-RYRCQRR 1153
++ + KFNVL+TTYE+I+ D+ L+K+ WKY+I+DE RMK+ L + L+ Y RR
Sbjct: 847 QLRSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRR 906
Query: 1154 LLLTGTPLQNDLKELWSLLNLLLPEVFDNRKAFHDWFSQPFQKEGPTHNADDDWLETEKK 1213
LLLTGTPLQN L ELW+LLN LLP +F + F WF+ PF G + L E+
Sbjct: 907 LLLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVD-----LNEEET 961
Query: 1214 VIIIHRLHQILEPFMLRRRVEDVEGSLPPKVSIVLRCRMSAIQSAIYDWIKATGTLRVDP 1273
++II RLH++L PF+LRR ++VE LP KV V++C MSA+Q +Y ++A G L D
Sbjct: 962 ILIIRRLHKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVLLTDG 1021
Query: 1274 EDEKRRVQKNPIYQAKVYKTLNNRCMELRKTCNHPLLNYPYFSDLSKDF----------- 1322
++ ++ KTL N M+LRK CNHP + F + + F
Sbjct: 1022 SEKDKK-------GKGGTKTLMNTIMQLRKICNHPYM----FQHIEESFSEHLGFTGGIV 1070
Query: 1323 ----LVKSCGKLWILDRILIKLQRTGHRVLLFSTMTKLLDILEEYLQWRQLVYRRIDGTT 1378
L ++ GK +LDRIL KL+ T H+VLLF MT L+ I+E+Y +R Y R+DGTT
Sbjct: 1071 QGLDLYRASGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTT 1130
Query: 1379 SLEDRESAIVDFNSHDSDCFIFLLSIRAAGRGLNLQSADTVIIYDPDPNPKNEEQAVARA 1438
EDR + FN S+ FIFLLS RA G GLNLQSADTVII+D D NP + QA RA
Sbjct: 1131 KAEDRGMLLKTFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRA 1190
Query: 1439 HRIGQKREVKVIYMEAVVDKISSHQKEDELRSGGTVDLEDDLAGKDRYIGSIEGLIRNNI 1498
HRIGQ+ EV+V+ + V+ + E LA
Sbjct: 1191 HRIGQQNEVRVLRL-CTVNSVE----------------EKILAAA--------------- 1218
Query: 1499 QQYKIDMADEVINAGRFDQRTTHEERRMTLETLLHDEERYQETVHDVPSLQEVNRMIARS 1558
+YK+++ +VI AG FDQ+++ ERR L+ +L EE+ +E + VN+MIAR
Sbjct: 1219 -KYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEQDEEEDEVP-DDETVNQMIARH 1276
Query: 1559 EDEVELFDQMDEEFGWIE--------EMTRYDQVPKWLRASTKEV 1595
E+E +LF +MD + E + D++P W+ EV
Sbjct: 1277 EEEFDLFMRMDLDRRREEARNPKRKPRLMEEDELPSWIIKDDAEV 1321
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 78/180 (43%), Gaps = 21/180 (11%)
Query: 744 DLVLRLQIEQKKLRLLDLQSRLRDEVDQQQQEIMAMPDRQYRKFVRLCERQRVELMR--- 800
DL + IE K LRLL+ Q +LR EV + A+ K + +RQ + R
Sbjct: 395 DLRTKATIELKALRLLNFQRQLRQEVVVCMRRDTALETALNAKAYKRSKRQSLREARITE 454
Query: 801 QVQTSQKAMREKQ--------LKSISQWRKKLLEAHWAIRDARTARNRGVAKYHERILRE 852
+++ QK +E++ L SI Q K E H ++ + VA YH RE
Sbjct: 455 KLEKQQKIEQERKRRQKHQEYLNSILQHAKDFREYHRSVTGKLQKLTKAVATYHANTERE 514
Query: 853 FSKRKDDDRNKRMEALKNNDVERYREMLLEQQTSIPGDAAERYAVLSSFLTQTEEYLYKL 912
K + +RM L D E YR+++ +++ L+ L QT+EY+ L
Sbjct: 515 QKKENERIEKERMRRLMAEDEEGYRKLIDQKKDK----------RLAYLLQQTDEYVANL 564
Score = 35.0 bits (79), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 39/74 (52%), Gaps = 11/74 (14%)
Query: 444 SAIPSSDGSSANNFSSQGGLAT-------QMPQQRLG---FTKHQLHVLKAQILAFRRLK 493
S +P+S SS SS G A + QQ G F ++QLH L+AQI+A++ L
Sbjct: 132 SPVPASGPSSGPQMSSGPGGAPLDGSDPQALGQQNRGPTPFNQNQLHQLRAQIMAYKMLA 191
Query: 494 KGEGTLPQELLRAI 507
+G+ LP L A+
Sbjct: 192 RGQ-PLPDHLQMAV 204
>sp|P51532|SMCA4_HUMAN Transcription activator BRG1 OS=Homo sapiens GN=SMARCA4 PE=1 SV=2
Length = 1647
Score = 483 bits (1242), Expect = e-135, Method: Compositional matrix adjust.
Identities = 279/678 (41%), Positives = 379/678 (55%), Gaps = 108/678 (15%)
Query: 975 VNKYYSLAHAVNERVMRQPSMLRAGTLRDYQIVGLQWMLSLYNNKLNGILADEMGLGKTV 1034
+ YY++AHAV ERV +Q +++ G L+ YQI GL+W++SLYNN LNGILADEMGLGKT+
Sbjct: 728 LQSYYAVAHAVTERVDKQSALMVNGVLKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTI 787
Query: 1035 QVMALIAYLMEFKGNYGPHLIIVPNAVLVNWKSELHKWLPSVSCIYYVGAKDQRSRLFSQ 1094
Q +ALI YLME K GP LIIVP + L NW E KW PSV + Y G+ R R F
Sbjct: 788 QTIALITYLMEHKRINGPFLIIVPLSTLSNWAYEFDKWAPSVVKVSYKGSPAAR-RAFVP 846
Query: 1095 EVAALKFNVLVTTYEFIMYDRSKLSKVDWKYIIIDEAQRMKDRESVLARDLD-RYRCQRR 1153
++ + KFNVL+TTYE+I+ D+ L+K+ WKY+I+DE RMK+ L + L+ Y RR
Sbjct: 847 QLRSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRR 906
Query: 1154 LLLTGTPLQNDLKELWSLLNLLLPEVFDNRKAFHDWFSQPFQKEGPTHNADDDWLETEKK 1213
LLLTGTPLQN L ELW+LLN LLP +F + F WF+ PF G + L E+
Sbjct: 907 LLLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVD-----LNEEET 961
Query: 1214 VIIIHRLHQILEPFMLRRRVEDVEGSLPPKVSIVLRCRMSAIQSAIYDWIKATGTLRVDP 1273
++II RLH++L PF+LRR ++VE LP KV V++C MSA+Q +Y ++A G L D
Sbjct: 962 ILIIRRLHKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVLLTDG 1021
Query: 1274 EDEKRRVQKNPIYQAKVYKTLNNRCMELRKTCNHPLLNYPYFSDLSKDF----------- 1322
++ ++ KTL N M+LRK CNHP + F + + F
Sbjct: 1022 SEKDKK-------GKGGTKTLMNTIMQLRKICNHPYM----FQHIEESFSEHLGFTGGIV 1070
Query: 1323 ----LVKSCGKLWILDRILIKLQRTGHRVLLFSTMTKLLDILEEYLQWRQLVYRRIDGTT 1378
L ++ GK +LDRIL KL+ T H+VLLF MT L+ I+E+Y +R Y R+DGTT
Sbjct: 1071 QGLDLYRASGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTT 1130
Query: 1379 SLEDRESAIVDFNSHDSDCFIFLLSIRAAGRGLNLQSADTVIIYDPDPNPKNEEQAVARA 1438
EDR + FN S+ FIFLLS RA G GLNLQSADTVII+D D NP + QA RA
Sbjct: 1131 KAEDRGMLLKTFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRA 1190
Query: 1439 HRIGQKREVKVIYMEAVVDKISSHQKEDELRSGGTVDLEDDLAGKDRYIGSIEGLIRNNI 1498
HRIGQ+ EV+V+ + V+ + E LA
Sbjct: 1191 HRIGQQNEVRVLRL-CTVNSVE----------------EKILAAA--------------- 1218
Query: 1499 QQYKIDMADEVINAGRFDQRTTHEERRMTLETLLHDEERYQETVH--------------- 1543
+YK+++ +VI AG FDQ+++ ERR L+ +L EE+ E+ H
Sbjct: 1219 -KYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEQ-DESRHCSTGSGSASFAHTAP 1276
Query: 1544 ------------------DVPSLQEVNRMIARSEDEVELFDQMDEEFGWIE--------E 1577
+VP + VN+MIAR E+E +LF +MD + E
Sbjct: 1277 PPAGVNPDLEEPPLKEEDEVPDDETVNQMIARHEEEFDLFMRMDLDRRREEARNPKRKPR 1336
Query: 1578 MTRYDQVPKWLRASTKEV 1595
+ D++P W+ EV
Sbjct: 1337 LMEEDELPSWIIKDDAEV 1354
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 78/180 (43%), Gaps = 21/180 (11%)
Query: 744 DLVLRLQIEQKKLRLLDLQSRLRDEVDQQQQEIMAMPDRQYRKFVRLCERQRVELMR--- 800
DL + IE K LRLL+ Q +LR EV + A+ K + +RQ + R
Sbjct: 395 DLRTKATIELKALRLLNFQRQLRQEVVVCMRRDTALETALNAKAYKRSKRQSLREARITE 454
Query: 801 QVQTSQKAMREKQ--------LKSISQWRKKLLEAHWAIRDARTARNRGVAKYHERILRE 852
+++ QK +E++ L SI Q K E H ++ + VA YH RE
Sbjct: 455 KLEKQQKIEQERKRRQKHQEYLNSILQHAKDFKEYHRSVTGKIQKLTKAVATYHANTERE 514
Query: 853 FSKRKDDDRNKRMEALKNNDVERYREMLLEQQTSIPGDAAERYAVLSSFLTQTEEYLYKL 912
K + +RM L D E YR+++ +++ L+ L QT+EY+ L
Sbjct: 515 QKKENERIEKERMRRLMAEDEEGYRKLIDQKKDK----------RLAYLLQQTDEYVANL 564
Score = 35.0 bits (79), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 39/74 (52%), Gaps = 11/74 (14%)
Query: 444 SAIPSSDGSSANNFSSQGGLAT-------QMPQQRLG---FTKHQLHVLKAQILAFRRLK 493
S +P+S SS SS G A + QQ G F ++QLH L+AQI+A++ L
Sbjct: 132 SPVPASGPSSGPQMSSGPGGAPLDGADPQALGQQNRGPTPFNQNQLHQLRAQIMAYKMLA 191
Query: 494 KGEGTLPQELLRAI 507
+G+ LP L A+
Sbjct: 192 RGQ-PLPDHLQMAV 204
>sp|Q3TKT4|SMCA4_MOUSE Transcription activator BRG1 OS=Mus musculus GN=Smarca4 PE=1 SV=1
Length = 1613
Score = 483 bits (1242), Expect = e-134, Method: Compositional matrix adjust.
Identities = 276/645 (42%), Positives = 375/645 (58%), Gaps = 75/645 (11%)
Query: 975 VNKYYSLAHAVNERVMRQPSMLRAGTLRDYQIVGLQWMLSLYNNKLNGILADEMGLGKTV 1034
+ YY++AHAV ERV +Q +++ G L+ YQI GL+W++SLYNN LNGILADEMGLGKT+
Sbjct: 728 LQSYYAVAHAVTERVDKQSALMVNGVLKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTI 787
Query: 1035 QVMALIAYLMEFKGNYGPHLIIVPNAVLVNWKSELHKWLPSVSCIYYVGAKDQRSRLFSQ 1094
Q +ALI YLME K GP LIIVP + L NW E KW PSV + Y G+ R R F
Sbjct: 788 QTIALITYLMEHKRINGPFLIIVPLSTLSNWAYEFDKWAPSVVKVSYKGSPAAR-RAFVP 846
Query: 1095 EVAALKFNVLVTTYEFIMYDRSKLSKVDWKYIIIDEAQRMKDRESVLARDLD-RYRCQRR 1153
++ + KFNVL+TTYE+I+ D+ L+K+ WKY+I+DE RMK+ L + L+ Y RR
Sbjct: 847 QLRSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRR 906
Query: 1154 LLLTGTPLQNDLKELWSLLNLLLPEVFDNRKAFHDWFSQPFQKEGPTHNADDDWLETEKK 1213
LLLTGTPLQN L ELW+LLN LLP +F + F WF+ PF G + L E+
Sbjct: 907 LLLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVD-----LNEEET 961
Query: 1214 VIIIHRLHQILEPFMLRRRVEDVEGSLPPKVSIVLRCRMSAIQSAIYDWIKATGTLRVDP 1273
++II RLH++L PF+LRR ++VE LP KV V++C MSA+Q +Y ++A G L D
Sbjct: 962 ILIIRRLHKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVLLTDG 1021
Query: 1274 EDEKRRVQKNPIYQAKVYKTLNNRCMELRKTCNHPLLNYPYFSDLSKDF----------- 1322
++ ++ KTL N M+LRK CNHP + F + + F
Sbjct: 1022 SEKDKK-------GKGGTKTLMNTIMQLRKICNHPYM----FQHIEESFSEHLGFTGGIV 1070
Query: 1323 ----LVKSCGKLWILDRILIKLQRTGHRVLLFSTMTKLLDILEEYLQWRQLVYRRIDGTT 1378
L ++ GK +LDRIL KL+ T H+VLLF MT L+ I+E+Y +R Y R+DGTT
Sbjct: 1071 QGLDLYRASGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTT 1130
Query: 1379 SLEDRESAIVDFNSHDSDCFIFLLSIRAAGRGLNLQSADTVIIYDPDPNPKNEEQAVARA 1438
EDR + FN S+ FIFLLS RA G GLNLQSADTVII+D D NP + QA RA
Sbjct: 1131 KAEDRGMLLKTFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRA 1190
Query: 1439 HRIGQKREVKVIYMEAVVDKISSHQKEDELRSGGTVDLEDDLAGKDRYIGSIEGLIRNNI 1498
HRIGQ+ EV+V+ + V+ + E LA
Sbjct: 1191 HRIGQQNEVRVLRL-CTVNSVE----------------EKILAAA--------------- 1218
Query: 1499 QQYKIDMADEVINAGRFDQRTTHEERRMTLETLLHDEERYQETVHDVPSLQEVNRMIARS 1558
+YK+++ +VI AG FDQ+++ ERR L+ +L EE+ +E + VN+MIAR
Sbjct: 1219 -KYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEQDEEEDEVP-DDETVNQMIARH 1276
Query: 1559 EDEVELFDQMDEEFGWIE--------EMTRYDQVPKWLRASTKEV 1595
E+E +LF +MD + E + D++P W+ EV
Sbjct: 1277 EEEFDLFMRMDLDRRREEARNPKRKPRLMEEDELPSWIIKDDAEV 1321
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 78/180 (43%), Gaps = 21/180 (11%)
Query: 744 DLVLRLQIEQKKLRLLDLQSRLRDEVDQQQQEIMAMPDRQYRKFVRLCERQRVELMR--- 800
DL + IE K LRLL+ Q +LR EV + A+ K + +RQ + R
Sbjct: 395 DLRTKATIELKALRLLNFQRQLRQEVVVCMRRDTALETALNAKAYKRSKRQSLREARITE 454
Query: 801 QVQTSQKAMREKQ--------LKSISQWRKKLLEAHWAIRDARTARNRGVAKYHERILRE 852
+++ QK +E++ L SI Q K E H ++ + VA YH RE
Sbjct: 455 KLEKQQKIEQERKRRQKHQEYLNSILQHAKDFREYHRSVTGKLQKLTKAVATYHANTERE 514
Query: 853 FSKRKDDDRNKRMEALKNNDVERYREMLLEQQTSIPGDAAERYAVLSSFLTQTEEYLYKL 912
K + +RM L D E YR+++ +++ L+ L QT+EY+ L
Sbjct: 515 QKKENERIEKERMRRLMAEDEEGYRKLIDQKKDK----------RLAYLLQQTDEYVANL 564
Score = 35.0 bits (79), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 39/74 (52%), Gaps = 11/74 (14%)
Query: 444 SAIPSSDGSSANNFSSQGGLAT-------QMPQQRLG---FTKHQLHVLKAQILAFRRLK 493
S +P+S SS SS G A + QQ G F ++QLH L+AQI+A++ L
Sbjct: 132 SPVPASGPSSGPQMSSGPGGAPLDGSDPQALGQQNRGPTPFNQNQLHQLRAQIMAYKMLA 191
Query: 494 KGEGTLPQELLRAI 507
+G+ LP L A+
Sbjct: 192 RGQ-PLPDHLQMAV 204
>sp|P32597|STH1_YEAST Nuclear protein STH1/NPS1 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=STH1 PE=1 SV=1
Length = 1359
Score = 482 bits (1240), Expect = e-134, Method: Compositional matrix adjust.
Identities = 294/794 (37%), Positives = 442/794 (55%), Gaps = 103/794 (12%)
Query: 788 VRLCERQRVELMRQVQTSQKAMREKQLKSISQWRKKLLEAHWAIRDARTARNRGVAKYHE 847
VRL E + + + + ++ + +++ SI + K+ W+ ++ R A H
Sbjct: 301 VRLAEELERQQLLEKRKKERNLHLQKINSIIDFIKERQSEQWSRQERCFQFGRLGASLHN 360
Query: 848 RILREFSKRKDDDRNKRMEALKNNDVERYREMLLEQQTSIPGDAAERYAVLSSFLTQTEE 907
++ ++ KR + +R+ ALK+ND E Y ++L QT + ++ L QT
Sbjct: 361 QMEKDEQKRIERTAKQRLAALKSNDEEAYLKLL--DQT--------KDTRITQLLRQTNS 410
Query: 908 YLYKLGSKITAAKNQQEVEEAANAAAAAARLQGLSEEEVRSAAACAGEEVMIRNRFLEMN 967
+L L + A +N+ ++ +Q +++EE
Sbjct: 411 FLDSLSEAVRAQQNEAKI-------LHGEEVQPITDEE---------------------- 441
Query: 968 APRDGSSVNKYYSLAHAVNERVMRQPSMLRAGTLRDYQIVGLQWMLSLYNNKLNGILADE 1027
R+ + YY +AH + E++ +QPS+L GTL++YQ+ GL+WM+SLYNN LNGILADE
Sbjct: 442 --REKTD---YYEVAHRIKEKIDKQPSILVGGTLKEYQLRGLEWMVSLYNNHLNGILADE 496
Query: 1028 MGLGKTVQVMALIAYLMEFKGNYGPHLIIVPNAVLVNWKSELHKWLPSVSCIYYVGAKDQ 1087
MGLGKT+Q ++LI YL E K + GP L+IVP + + NW E KW PS++ I Y G +Q
Sbjct: 497 MGLGKTIQSISLITYLYEVKKDIGPFLVIVPLSTITNWTLEFEKWAPSLNTIIYKGTPNQ 556
Query: 1088 RSRLFSQEVAALKFNVLVTTYEFIMYDRSKLSKVDWKYIIIDEAQRMKDRESVLARDLDR 1147
R L ++ F+VL+TTYE+I+ D+S LSK DW ++IIDE RMK+ +S L+ +
Sbjct: 557 RHSL-QHQIRVGNFDVLLTTYEYIIKDKSLLSKHDWAHMIIDEGHRMKNAQSKLSFTISH 615
Query: 1148 Y-RCQRRLLLTGTPLQNDLKELWSLLNLLLPEVFDNRKAFHDWFSQPFQKEGPTHNADDD 1206
Y R + RL+LTGTPLQN+L ELW+LLN +LP++F++ K F DWF+ PF G +
Sbjct: 616 YYRTRNRLILTGTPLQNNLPELWALLNFVLPKIFNSAKTFEDWFNTPFANTGTQEKLEL- 674
Query: 1207 WLETEKKVIIIHRLHQILEPFMLRRRVEDVEGSLPPKVSIVLRCRMSAIQSAIYDWIKAT 1266
E+ ++II RLH++L PF+LRR ++VE LP KV V++C++S +Q +Y +
Sbjct: 675 --TEEETLLIIRRLHKVLRPFLLRRLKKEVEKDLPDKVEKVIKCKLSGLQQQLYQQMLKH 732
Query: 1267 GTLRVDPEDEKRRVQKNPIYQAKVYKTLNNRCMELRKTCNHPLLNYPYFSDL-------- 1318
L V E K I K LNN+ M+LRK CNHP + F ++
Sbjct: 733 NALFVGAGTEG--ATKGGI------KGLNNKIMQLRKICNHPFV----FDEVEGVVNPSR 780
Query: 1319 -SKDFLVKSCGKLWILDRILIKLQRTGHRVLLFSTMTKLLDILEEYLQWRQLVYRRIDGT 1377
+ D L + GK +LDR+L K + +GHRVL+F MT+++DI+E++L+ + L Y R+DG+
Sbjct: 781 GNSDLLFRVAGKFELLDRVLPKFKASGHRVLMFFQMTQVMDIMEDFLRMKDLKYMRLDGS 840
Query: 1378 TSLEDRESAIVDFNSHDSDCFIFLLSIRAAGRGLNLQSADTVIIYDPDPNPKNEEQAVAR 1437
T E+R + FN+ DSD F FLLS RA G GLNLQ+ADTVII+D D NP + QA R
Sbjct: 841 TKTEERTEMLNAFNAPDSDYFCFLLSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDR 900
Query: 1438 AHRIGQKREVKVIYMEAVVDKISSHQKEDELRSGGTVDLEDDLAGKDRYIGSIEGLIRNN 1497
AHRIGQK EV+++ + T D S+E +I
Sbjct: 901 AHRIGQKNEVRILRL-------------------ITTD-------------SVEEVILER 928
Query: 1498 IQQYKIDMADEVINAGRFDQRTTHEERRMTLETLLHDEERYQETVHDVPSLQEVNRMIAR 1557
Q K+D+ +VI AG+FD ++T EE+ L L+ E + E+N +AR
Sbjct: 929 AMQ-KLDIDGKVIQAGKFDNKSTAEEQEAFLRRLIESETNRDDDDKAELDDDELNDTLAR 987
Query: 1558 SEDEVELFDQMDEE 1571
S DE LFD++D+E
Sbjct: 988 SADEKILFDKIDKE 1001
>sp|P22082|SNF2_YEAST Transcription regulatory protein SNF2 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=SNF2 PE=1 SV=1
Length = 1703
Score = 475 bits (1223), Expect = e-132, Method: Compositional matrix adjust.
Identities = 285/752 (37%), Positives = 437/752 (58%), Gaps = 99/752 (13%)
Query: 846 HERILREFSKRKDDDRNKRMEALKNNDVERYREMLLEQQTSIPGDAAERYAVLSSFLTQT 905
H + R+ KR + +R++ALK ND E Y ++L QT + ++ L QT
Sbjct: 637 HTNLERDEQKRAEKKAKERLQALKANDEEAYIKLL--DQT--------KDTRITHLLRQT 686
Query: 906 EEYLYKLGSKITAAKNQQEVEEAANAAAAAARLQGLSEEEVRSAAACAGEEV----MIRN 961
+L L A K+QQ+ ++E + S A EEV M+
Sbjct: 687 NAFLDSLTR---AVKDQQKY----------------TKEMIDSHIKEASEEVDDLSMVPK 727
Query: 962 RFLEMNAPRDGSSVNKYYSLAHAVNERVMRQPSMLRAGTLRDYQIVGLQWMLSLYNNKLN 1021
E D +S YY++AH + E + +QPS+L GTL+DYQI GLQWM+SL+NN LN
Sbjct: 728 MKDEEYDDDDDNSNVDYYNVAHRIKEDIKKQPSILVGGTLKDYQIKGLQWMVSLFNNHLN 787
Query: 1022 GILADEMGLGKTVQVMALIAYLMEFKGNYGPHLIIVPNAVLVNWKSELHKWLPSVSCIYY 1081
GILADEMGLGKT+Q ++L+ YL E K GP+L+IVP + L NW SE KW P++ I +
Sbjct: 788 GILADEMGLGKTIQTISLLTYLYEMKNIRGPYLVIVPLSTLSNWSSEFAKWAPTLRTISF 847
Query: 1082 VGAKDQRSRLFSQEVAALKFNVLVTTYEFIMYDRSKLSKVDWKYIIIDEAQRMKDRESVL 1141
G+ ++R + ++ A +F+V++TT+E+I+ +R+ LSKV W ++IIDE RMK+ +S L
Sbjct: 848 KGSPNER-KAKQAKIRAGEFDVVLTTFEYIIKERALLSKVKWVHMIIDEGHRMKNAQSKL 906
Query: 1142 ARDLD-RYRCQRRLLLTGTPLQNDLKELWSLLNLLLPEVFDNRKAFHDWFSQPFQKEGPT 1200
+ L+ Y RL+LTGTPLQN+L ELW+LLN +LP++F++ K+F +WF+ PF G
Sbjct: 907 SLTLNTHYHADYRLILTGTPLQNNLPELWALLNFVLPKIFNSVKSFDEWFNTPFANTG-- 964
Query: 1201 HNADDDWLETEKKVIIIHRLHQILEPFMLRRRVEDVEGSLPPKVSIVLRCRMSAIQSAIY 1260
D L E+ +++I RLH++L PF+LRR +DVE LP KV V++C+MSA+Q +Y
Sbjct: 965 -GQDKIELSEEETLLVIRRLHKVLRPFLLRRLKKDVEKELPDKVEKVVKCKMSALQQIMY 1023
Query: 1261 DWIKATGTLRVDPEDEKRRVQKNPIYQAKVYKTLNNRCMELRKTCNHPLLNYPYFSDL-- 1318
+ L + ++ K+ V + NN+ M+L+K CNHP + F ++
Sbjct: 1024 QQMLKYRRLFIGDQNNKKMVG---------LRGFNNQIMQLKKICNHPFV----FEEVED 1070
Query: 1319 -------SKDFLVKSCGKLWILDRILIKLQRTGHRVLLFSTMTKLLDILEEYLQWRQLVY 1371
+ D + + GK +LDRIL KL+ TGHRVL+F MT+++DI+E++L++ + Y
Sbjct: 1071 QINPTRETNDDIWRVAGKFELLDRILPKLKATGHRVLIFFQMTQIMDIMEDFLRYINIKY 1130
Query: 1372 RRIDGTTSLEDRESAIVDFNSHDSDCFIFLLSIRAAGRGLNLQSADTVIIYDPDPNPKNE 1431
R+DG T ++R + FN+ DS+ F+LS RA G GLNLQ+ADTVII+D D NP +
Sbjct: 1131 LRLDGHTKSDERSELLRLFNAPDSEYLCFILSTRAGGLGLNLQTADTVIIFDTDWNPHQD 1190
Query: 1432 EQAVARAHRIGQKREVKVIYMEAVVDKISSHQKEDELRSGGTVDLEDDLAGKDRYIGSIE 1491
QA RAHRIGQK EV+++ + I+++ S+E
Sbjct: 1191 LQAQDRAHRIGQKNEVRILRL------ITTN--------------------------SVE 1218
Query: 1492 GLIRNNIQQYKIDMADEVINAGRFDQRTTHEERRMTLETLLHDEE----RYQETVHDVPS 1547
+I + K+D+ +VI AG+FD ++T EE+ L +LL EE + + V +
Sbjct: 1219 EVILERAYK-KLDIDGKVIQAGKFDNKSTSEEQEALLRSLLDAEEERRKKRESGVEEEEE 1277
Query: 1548 LQ--EVNRMIARSEDEVELFDQMDEEFGWIEE 1577
L+ E+N ++AR+++E+ + +MDE+ EE
Sbjct: 1278 LKDSEINEILARNDEEMAVLTRMDEDRSKKEE 1309
>sp|Q6PGB8|SMCA1_MOUSE Probable global transcription activator SNF2L1 OS=Mus musculus
GN=Smarca1 PE=1 SV=1
Length = 1046
Score = 395 bits (1016), Expect = e-108, Method: Compositional matrix adjust.
Identities = 209/466 (44%), Positives = 290/466 (62%), Gaps = 40/466 (8%)
Query: 993 PSMLRAGTLRDYQIVGLQWMLSLYNNKLNGILADEMGLGKTVQVMALIAYLMEFKGNYGP 1052
PS ++ G LRDYQI GL W++SLY N +NGILADEMGLGKT+Q +AL+ YL ++ GP
Sbjct: 179 PSYVKGGPLRDYQIRGLNWLISLYENGVNGILADEMGLGKTLQTIALLGYLKHYRNIPGP 238
Query: 1053 HLIIVPNAVLVNWKSELHKWLPSVSCIYYVGAKDQRSRLFSQEVAALKFNVLVTTYEFIM 1112
H+++VP + L NW +E +W+PS+ I +VG KD R+ E+ +++V VT+YE ++
Sbjct: 239 HMVLVPKSTLHNWMNEFKRWVPSLRVICFVGDKDVRAAFIRDEMMPGEWDVCVTSYEMVI 298
Query: 1113 YDRSKLSKVDWKYIIIDEAQRMKDRESVLARDLDRYRCQRRLLLTGTPLQNDLKELWSLL 1172
++S K W+Y++IDEA R+K+ +S L+ + ++ RLLLTGTPLQN+L ELW+LL
Sbjct: 299 KEKSVFKKFHWRYLVIDEAHRIKNEKSKLSEIVREFKSTNRLLLTGTPLQNNLHELWALL 358
Query: 1173 NLLLPEVFDNRKAFHDWFSQPFQKEGPTHNADDDWLETEKKVIIIHRLHQILEPFMLRRR 1232
N LLP+VF++ F WF T N D +K ++ RLH +L+PF+LRR
Sbjct: 359 NFLLPDVFNSADDFDSWFD--------TKNCLGD----QK---LVERLHAVLKPFLLRRI 403
Query: 1233 VEDVEGSLPPKVSIVLRCRMSAIQSAIYDWI--KATGTLRVDPEDEKRRVQKNPIYQAKV 1290
DVE SLPPK I + +S +Q Y I K L + +K R
Sbjct: 404 KTDVEKSLPPKKEIKIYLGLSKMQREWYTKILMKDIDVLNSSGKMDKMR----------- 452
Query: 1291 YKTLNNRCMELRKTCNHPLL------NYPYFSDLSKDFLVKSCGKLWILDRILIKLQRTG 1344
L N M+LRK CNHP L PY +D + +V + GK+ LD++L +++ G
Sbjct: 453 ---LLNILMQLRKCCNHPYLFDGAEPGPPYTTD---EHIVGNSGKMVALDKLLARIKEQG 506
Query: 1345 HRVLLFSTMTKLLDILEEYLQWRQLVYRRIDGTTSLEDRESAIVDFNSHDSDCFIFLLSI 1404
RVL+FS MT+LLDILE+Y WR Y R+DG T E+RE AI FN+ +S FIF+LS
Sbjct: 507 SRVLIFSQMTRLLDILEDYCMWRGYEYSRLDGQTPHEEREEAIDAFNAPNSSKFIFMLST 566
Query: 1405 RAAGRGLNLQSADTVIIYDPDPNPKNEEQAVARAHRIGQKREVKVI 1450
RA G G+NL SAD VI+YD D NP+ + QA+ RAHRIGQK+ V+V
Sbjct: 567 RAGGLGINLASADVVILYDSDWNPQVDLQAMDRAHRIGQKKPVRVF 612
>sp|Q24368|ISWI_DROME Chromatin-remodeling complex ATPase chain Iswi OS=Drosophila
melanogaster GN=Iswi PE=1 SV=1
Length = 1027
Score = 394 bits (1012), Expect = e-108, Method: Compositional matrix adjust.
Identities = 218/535 (40%), Positives = 312/535 (58%), Gaps = 45/535 (8%)
Query: 993 PSMLRAGTLRDYQIVGLQWMLSLYNNKLNGILADEMGLGKTVQVMALIAYLMEFKGNYGP 1052
P+ +++G +RDYQI GL WM+SLY N +NGILADEMGLGKT+Q ++L+ YL FK GP
Sbjct: 120 PAYIKSGEMRDYQIRGLNWMISLYENGINGILADEMGLGKTLQTISLLGYLKHFKNQAGP 179
Query: 1053 HLIIVPNAVLVNWKSELHKWLPSVSCIYYVGAKDQRSRLFSQEVAALKFNVLVTTYEFIM 1112
H++IVP + L NW +E KW PS+ + +G +D R+ + +++V VT+YE +
Sbjct: 180 HIVIVPKSTLQNWVNEFKKWCPSLRAVCLIGDQDTRNTFIRDVLMPGEWDVCVTSYEMCI 239
Query: 1113 YDRSKLSKVDWKYIIIDEAQRMKDRESVLARDLDRYRCQRRLLLTGTPLQNDLKELWSLL 1172
++S K +W+Y++IDEA R+K+ +S L+ L ++ RLL+TGTPLQN+L ELW+LL
Sbjct: 240 REKSVFKKFNWRYLVIDEAHRIKNEKSKLSEILREFKTANRLLITGTPLQNNLHELWALL 299
Query: 1173 NLLLPEVFDNRKAFHDWFSQPFQKEGPTHNADDDWLETEKKVIIIHRLHQILEPFMLRRR 1232
N LLP+VF++ + F +WF+ T DD +I RLH +L+PF+LRR
Sbjct: 300 NFLLPDVFNSSEDFDEWFNT------NTCLGDD---------ALITRLHAVLKPFLLRRL 344
Query: 1233 VEDVEGSLPPKVSIVLRCRMSAIQSAIYDWIKATGTLRVDPEDEKRRVQKNPIYQAKVYK 1292
+VE L PK + + +S +Q DW +D + +V+K
Sbjct: 345 KAEVEKRLKPKKEMKIFVGLSKMQR---DWYTKVLLKDIDVVNGAGKVEK---------M 392
Query: 1293 TLNNRCMELRKTCNHPLL------NYPYFSDLSKDFLVKSCGKLWILDRILIKLQRTGHR 1346
L N M+LRK NHP L PY +D LV + GK+ ILD++L KLQ G R
Sbjct: 393 RLQNILMQLRKCTNHPYLFDGAEPGPPYTTDTH---LVYNSGKMAILDKLLPKLQEQGSR 449
Query: 1347 VLLFSTMTKLLDILEEYLQWRQLVYRRIDGTTSLEDRESAIVDFNSHDSDCFIFLLSIRA 1406
VL+FS MT++LDILE+Y WR Y R+DG T EDR I +FN +S F+F+LS RA
Sbjct: 450 VLIFSQMTRMLDILEDYCHWRNYNYCRLDGQTPHEDRNRQIQEFNMDNSAKFLFMLSTRA 509
Query: 1407 AGRGLNLQSADTVIIYDPDPNPKNEEQAVARAHRIGQKREVKVIYM--EAVVDKISSHQK 1464
G G+NL +AD VIIYD D NP+ + QA+ RAHRIGQK++V+V + E+ V++ +
Sbjct: 510 GGLGINLATADVVIIYDSDWNPQMDLQAMDRAHRIGQKKQVRVFRLITESTVEEKIVERA 569
Query: 1465 EDELR-------SGGTVDLEDDLAGKDRYIGSIEGLIRNNIQQYKIDMADEVINA 1512
E +LR G VD + KD + I + D+ DE I+
Sbjct: 570 EVKLRLDKMVIQGGRLVDNRSNQLNKDEMLNIIRFGANQVFSSKETDITDEDIDV 624
>sp|Q08773|ISW2_YEAST ISWI chromatin-remodeling complex ATPase ISW2 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=ISW2 PE=1 SV=1
Length = 1120
Score = 390 bits (1002), Expect = e-107, Method: Compositional matrix adjust.
Identities = 203/468 (43%), Positives = 299/468 (63%), Gaps = 35/468 (7%)
Query: 989 VMRQPSMLRAGTLRDYQIVGLQWMLSLYNNKLNGILADEMGLGKTVQVMALIAYLMEFKG 1048
V PS +++G LRDYQ+ GL W++SL+ NKL+GILADEMGLGKT+Q ++ + YL K
Sbjct: 172 VSESPSFVKSGKLRDYQVQGLNWLISLHENKLSGILADEMGLGKTLQTISFLGYLRYVKQ 231
Query: 1049 NYGPHLIIVPNAVLVNWKSELHKWLPSVSCIYYVGAKDQRSRLFSQEVAALKFNVLVTTY 1108
GP LIIVP + L NW+ E KW P+V+ + G KD R+ + + +F+VL+T+Y
Sbjct: 232 IEGPFLIIVPKSTLDNWRREFLKWTPNVNVLVLHGDKDTRADIVRNIILEARFDVLITSY 291
Query: 1109 EFIMYDRSKLSKVDWKYIIIDEAQRMKDRESVLARDLDRYRCQRRLLLTGTPLQNDLKEL 1168
E ++ +++ L ++ W+YI+IDEA R+K+ +S L++ + + + RLL+TGTPLQN+L EL
Sbjct: 292 EMVIREKNALKRLAWQYIVIDEAHRIKNEQSALSQIIRLFYSKNRLLITGTPLQNNLHEL 351
Query: 1169 WSLLNLLLPEVFDNRKAFHDWFSQPFQKEGPTHNADDDWLETEKKVIIIHRLHQILEPFM 1228
W+LLN LLP++F + + F +WF Q +N++ D + I+I +LH +L PF+
Sbjct: 352 WALLNFLLPDIFGDSELFDEWFEQ--------NNSEQD------QEIVIQQLHSVLNPFL 397
Query: 1229 LRRRVEDVEGSLPPKVSIVLRCRMSAIQSAIYDWIKATGTLRVDPEDEKRRVQKNPIYQA 1288
LRR DVE SL PK+ + M+ +Q W K+ +D N
Sbjct: 398 LRRVKADVEKSLLPKIETNVYVGMTDMQ---IQWYKSLLEKDIDA--------VNGAVGK 446
Query: 1289 KVYKT-LNNRCMELRKTCNHPLL------NYPYFSDLSKDFLVKSCGKLWILDRILIKLQ 1341
+ KT L N M+LRK CNHP L PY +D + L+ + GK+ ILD++L +L+
Sbjct: 447 REGKTRLLNIVMQLRKCCNHPYLFEGAEPGPPYTTD---EHLIFNSGKMIILDKLLKRLK 503
Query: 1342 RTGHRVLLFSTMTKLLDILEEYLQWRQLVYRRIDGTTSLEDRESAIVDFNSHDSDCFIFL 1401
G RVL+FS M++LLDILE+Y +R Y RIDG+TS E+R AI ++N +S+ F+FL
Sbjct: 504 EKGSRVLIFSQMSRLLDILEDYCYFRDFEYCRIDGSTSHEERIEAIDEYNKPNSEKFVFL 563
Query: 1402 LSIRAAGRGLNLQSADTVIIYDPDPNPKNEEQAVARAHRIGQKREVKV 1449
L+ RA G G+NL +ADTVI++D D NP+ + QA+ RAHRIGQK++V V
Sbjct: 564 LTTRAGGLGINLVTADTVILFDSDWNPQADLQAMDRAHRIGQKKQVHV 611
>sp|P28370|SMCA1_HUMAN Probable global transcription activator SNF2L1 OS=Homo sapiens
GN=SMARCA1 PE=1 SV=2
Length = 1054
Score = 390 bits (1001), Expect = e-107, Method: Compositional matrix adjust.
Identities = 211/478 (44%), Positives = 291/478 (60%), Gaps = 52/478 (10%)
Query: 993 PSMLRAGTLRDYQIVGLQWMLSLYNNKLNGILADEMGLGKTVQVMALIAYLMEFKGNYGP 1052
PS ++ G LRDYQI GL W++SLY N +NGILADEMGLGKT+Q +AL+ YL ++ GP
Sbjct: 175 PSYVKGGPLRDYQIRGLNWLISLYENGVNGILADEMGLGKTLQTIALLGYLKHYRNIPGP 234
Query: 1053 HLIIVPNAVLVNWKSELHKWLPSVSCIYYVGAKDQRSRLFSQEVAALKFNVLVTTYEFIM 1112
H+++VP + L NW +E +W+PS+ I +VG KD R+ E+ +++V VT+YE ++
Sbjct: 235 HMVLVPKSTLHNWMNEFKRWVPSLRVICFVGDKDARAAFIRDEMMPGEWDVCVTSYEMVI 294
Query: 1113 YDRSKLSKVDWKYIIIDEAQRMKDRESVLARDLDRYRCQRRLLLTGTPLQNDLKELWSLL 1172
++S K W+Y++IDEA R+K+ +S L+ + ++ RLLLTGTPLQN+L ELW+LL
Sbjct: 295 KEKSVFKKFHWRYLVIDEAHRIKNEKSKLSEIVREFKSTNRLLLTGTPLQNNLHELWALL 354
Query: 1173 NLLLPEVFDNRKAFHDWFSQPFQKEGPTHNADDDWLETEKKVIIIHRLHQILEPFMLRRR 1232
N LLP+VF++ F WF T N D +K ++ RLH +L+PF+LRR
Sbjct: 355 NFLLPDVFNSADDFDSWFD--------TKNCLGD----QK---LVERLHAVLKPFLLRRI 399
Query: 1233 VEDVEGSLPPKVSIVLRCRMSAIQSAIYDWI--KATGTLRVDPEDEKRRVQKNPIYQAKV 1290
DVE SLPPK I + +S +Q Y I K L + +K R
Sbjct: 400 KTDVEKSLPPKKEIKIYLGLSKMQREWYTKILMKDIDVLNSSGKMDKMR----------- 448
Query: 1291 YKTLNNRCMELRKTCNHPLL------NYPYFSDLSKDFLVKSCGKLWILDRILIKLQRTG 1344
L N M+LRK CNHP L PY +D + +V + GK+ +LD++L KL+ G
Sbjct: 449 ---LLNILMQLRKCCNHPYLFDGAEPGPPYTTD---EHIVSNSGKMVVLDKLLAKLKEQG 502
Query: 1345 HRVLLFSTMTKLLDILEEYLQWRQLVYRRIDGTTSLEDRES------------AIVDFNS 1392
RVL+FS MT+LLDILE+Y WR Y R+DG T E+RE AI FN+
Sbjct: 503 SRVLIFSQMTRLLDILEDYCMWRGYEYCRLDGQTPHEEREDKFLEVEFLGQREAIEAFNA 562
Query: 1393 HDSDCFIFLLSIRAAGRGLNLQSADTVIIYDPDPNPKNEEQAVARAHRIGQKREVKVI 1450
+S FIF+LS RA G G+NL SAD VI+YD D NP+ + QA+ RAHRIGQK+ V+V
Sbjct: 563 PNSSKFIFMLSTRAGGLGINLASADVVILYDSDWNPQVDLQAMDRAHRIGQKKPVRVF 620
>sp|P41877|ISW1_CAEEL Chromatin-remodeling complex ATPase chain isw-1 OS=Caenorhabditis
elegans GN=isw-1 PE=1 SV=2
Length = 1009
Score = 387 bits (995), Expect = e-106, Method: Compositional matrix adjust.
Identities = 200/492 (40%), Positives = 299/492 (60%), Gaps = 38/492 (7%)
Query: 991 RQPSMLRAGTLRDYQIVGLQWMLSLYNNKLNGILADEMGLGKTVQVMALIAYLMEFKGNY 1050
+ P + G +RDYQ+ GL W+ SL +NK+NGILADEMGLGKT+Q +++I Y+ +K
Sbjct: 122 KSPFYIENGEMRDYQVRGLNWLASLQHNKINGILADEMGLGKTLQTISMIGYMKHYKNKA 181
Query: 1051 GPHLIIVPNAVLVNWKSELHKWLPSVSCIYYVGAKDQRSRLFSQEVAALKFNVLVTTYEF 1110
PHL+IVP + L NW +E KW PS++ + +G + R+++ + KF+V TTYE
Sbjct: 182 SPHLVIVPKSTLQNWANEFKKWCPSINAVVLIGDEAARNQVLRDVILPQKFDVCCTTYEM 241
Query: 1111 IMYDRSKLSKVDWKYIIIDEAQRMKDRESVLARDLDRYRCQRRLLLTGTPLQNDLKELWS 1170
++ +++L K++W+YIIIDEA R+K+ +S L+ + + RLL+TGTPLQN+L ELW+
Sbjct: 242 MLKVKTQLKKLNWRYIIIDEAHRIKNEKSKLSETVRELNSENRLLITGTPLQNNLHELWA 301
Query: 1171 LLNLLLPEVFDNRKAFHDWFSQPFQKEGPTHNADDDWLETEKKVIIIHRLHQILEPFMLR 1230
LLN LLP++F + F WFS + + N D ++ RLH++L+PF+LR
Sbjct: 302 LLNFLLPDIFTSSDDFDSWFSN----DAMSGNTD-----------LVQRLHKVLQPFLLR 346
Query: 1231 RRVEDVEGSLPPKVSIVLRCRMSAIQSAIYDWIKATGTLRVDPEDEKRRVQKNPIYQAKV 1290
R DVE SL PK + + +S +Q +W +D + +V+K
Sbjct: 347 RIKSDVEKSLLPKKEVKVYVGLSKMQR---EWYTKVLMKDIDIINGAGKVEK-------- 395
Query: 1291 YKTLNNRCMELRKTCNHPLL------NYPYFSDLSKDFLVKSCGKLWILDRILIKLQRTG 1344
L N M LRK NHP L P+ +D LV + GK+ +LD++L+K + G
Sbjct: 396 -ARLMNILMHLRKCVNHPYLFDGAEPGPPFTTD---QHLVDNSGKMVVLDKLLMKFKEQG 451
Query: 1345 HRVLLFSTMTKLLDILEEYLQWRQLVYRRIDGTTSLEDRESAIVDFNSHDSDCFIFLLSI 1404
RVL+FS +++LD+LE++ WR Y R+DG+T EDR +AI +N+ DS FIF+L+
Sbjct: 452 SRVLIFSQFSRMLDLLEDFCWWRHYEYCRLDGSTPHEDRSNAIEAYNAPDSKKFIFMLTT 511
Query: 1405 RAAGRGLNLQSADTVIIYDPDPNPKNEEQAVARAHRIGQKREVKVIYM--EAVVDKISSH 1462
RA G G+NL +AD VIIYD D NP+++ QA+ RAHRIGQK++V+V + E VD+
Sbjct: 512 RAGGLGINLATADVVIIYDSDWNPQSDLQAMDRAHRIGQKKQVRVFRLITENTVDERIIE 571
Query: 1463 QKEDELRSGGTV 1474
+ E +LR V
Sbjct: 572 KAEAKLRLDNIV 583
>sp|Q91ZW3|SMCA5_MOUSE SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily A member 5 OS=Mus musculus GN=Smarca5
PE=1 SV=1
Length = 1051
Score = 385 bits (988), Expect = e-105, Method: Compositional matrix adjust.
Identities = 213/528 (40%), Positives = 311/528 (58%), Gaps = 49/528 (9%)
Query: 980 SLAHAVNERVMRQPSMLRAGTLRDYQIVGLQWMLSLYNNKLNGILADEMGLGKTVQVMAL 1039
S A V R PS ++ G LRDYQ+ GL W++SLY N +NGILADEMGLGKT+Q ++L
Sbjct: 158 SKATNVCTRFEDSPSYVKWGKLRDYQVRGLNWLISLYENGINGILADEMGLGKTLQTISL 217
Query: 1040 IAYLMEFKGNYGPHLIIVPNAVLVNWKSELHKWLPSVSCIYYVGAKDQRSRLFSQEVAAL 1099
+ Y+ ++ GPH+++VP + L NW SE KW+P++ + +G K+QR+ +
Sbjct: 218 LGYMKHYRNIPGPHMVLVPKSTLHNWMSEFKKWVPTLRSVCLIGDKEQRAAFVRDVLLPG 277
Query: 1100 KFNVLVTTYEFIMYDRSKLSKVDWKYIIIDEAQRMKDRESVLARDLDRYRCQRRLLLTGT 1159
+++V VT+YE ++ ++S K +W+Y++IDEA R+K+ +S L+ + ++ RLLLTGT
Sbjct: 278 EWDVCVTSYEMLIKEKSVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGT 337
Query: 1160 PLQNDLKELWSLLNLLLPEVFDNRKAFHDWFSQPFQKEGPTHNADDDWLETEKKVIIIHR 1219
PLQN+L ELWSLLN LLP+VF++ F WF T+N L +K ++ R
Sbjct: 338 PLQNNLHELWSLLNFLLPDVFNSADDFDSWFD--------TNNC----LGDQK---LVER 382
Query: 1220 LHQILEPFMLRRRVEDVEGSLPPKVSIVLRCRMSAIQSAIYDWI--KATGTLRVDPEDEK 1277
LH +L PF+LRR DVE SLPPK + + +S +Q Y I K L + +K
Sbjct: 383 LHMVLRPFLLRRIKADVEKSLPPKKEVKIYVGLSKMQREWYTRILMKDIDILNSAGKMDK 442
Query: 1278 RRVQKNPIYQAKVYKTLNNRCMELRKTCNHPLL------NYPYFSDLSKDFLVKSCGKLW 1331
R L N M+LRK CNHP L PY +D+ LV + GK+
Sbjct: 443 MR--------------LLNILMQLRKCCNHPYLFDGAEPGPPYTTDMH---LVTNSGKMV 485
Query: 1332 ILDRILIKLQRTGHRVLLFSTMTKLLDILEEYLQWRQLVYRRIDGTTSLEDRESAIVDFN 1391
+LD++L KL+ G RVL+FS MT++LDILE+Y WR Y R+DG T ++R+ +I +N
Sbjct: 486 VLDKLLPKLKEQGSRVLIFSQMTRVLDILEDYCMWRNYEYCRLDGQTPHDERQDSINAYN 545
Query: 1392 SHDSDCFIFLLSIRAAGRGLNLQSADTVIIYDPDPNPKNEEQAVARAHRIGQKREVKVIY 1451
+S F+F+LS RA G G+NL +AD VI+YD D NP+ + QA+ RAHRIGQ + V+V
Sbjct: 546 EPNSTKFVFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQTKTVRVFR 605
Query: 1452 M-------EAVVDKISSHQKEDE--LRSGGTVDLEDDLAGKDRYIGSI 1490
E +V++ + D ++ G VD + GKD + I
Sbjct: 606 FITDNTVEERIVERAEMKLRLDSIVIQQGRLVDQNLNKIGKDEMLQMI 653
>sp|O60264|SMCA5_HUMAN SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily A member 5 OS=Homo sapiens GN=SMARCA5
PE=1 SV=1
Length = 1052
Score = 384 bits (987), Expect = e-105, Method: Compositional matrix adjust.
Identities = 212/528 (40%), Positives = 311/528 (58%), Gaps = 49/528 (9%)
Query: 980 SLAHAVNERVMRQPSMLRAGTLRDYQIVGLQWMLSLYNNKLNGILADEMGLGKTVQVMAL 1039
S A V R PS ++ G LRDYQ+ GL W++SLY N +NGILADEMGLGKT+Q ++L
Sbjct: 159 SKATNVCTRFEDSPSYVKWGKLRDYQVRGLNWLISLYENGINGILADEMGLGKTLQTISL 218
Query: 1040 IAYLMEFKGNYGPHLIIVPNAVLVNWKSELHKWLPSVSCIYYVGAKDQRSRLFSQEVAAL 1099
+ Y+ ++ GPH+++VP + L NW SE +W+P++ + +G K+QR+ +
Sbjct: 219 LGYMKHYRNIPGPHMVLVPKSTLHNWMSEFKRWVPTLRSVCLIGDKEQRAAFVRDVLLPG 278
Query: 1100 KFNVLVTTYEFIMYDRSKLSKVDWKYIIIDEAQRMKDRESVLARDLDRYRCQRRLLLTGT 1159
+++V VT+YE ++ ++S K +W+Y++IDEA R+K+ +S L+ + ++ RLLLTGT
Sbjct: 279 EWDVCVTSYEMLIKEKSVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGT 338
Query: 1160 PLQNDLKELWSLLNLLLPEVFDNRKAFHDWFSQPFQKEGPTHNADDDWLETEKKVIIIHR 1219
PLQN+L ELWSLLN LLP+VF++ F WF T+N D +K ++ R
Sbjct: 339 PLQNNLHELWSLLNFLLPDVFNSADDFDSWFD--------TNNCLGD----QK---LVER 383
Query: 1220 LHQILEPFMLRRRVEDVEGSLPPKVSIVLRCRMSAIQSAIYDWI--KATGTLRVDPEDEK 1277
LH +L PF+LRR DVE SLPPK + + +S +Q Y I K L + +K
Sbjct: 384 LHMVLRPFLLRRIKADVEKSLPPKKEVKIYVGLSKMQREWYTRILMKDIDILNSAGKMDK 443
Query: 1278 RRVQKNPIYQAKVYKTLNNRCMELRKTCNHPLL------NYPYFSDLSKDFLVKSCGKLW 1331
R L N M+LRK CNHP L PY +D+ LV + GK+
Sbjct: 444 MR--------------LLNILMQLRKCCNHPYLFDGAEPGPPYTTDMH---LVTNSGKMV 486
Query: 1332 ILDRILIKLQRTGHRVLLFSTMTKLLDILEEYLQWRQLVYRRIDGTTSLEDRESAIVDFN 1391
+LD++L KL+ G RVL+FS MT++LDILE+Y WR Y R+DG T ++R+ +I +N
Sbjct: 487 VLDKLLPKLKEQGSRVLIFSQMTRVLDILEDYCMWRNYEYCRLDGQTPHDERQDSINAYN 546
Query: 1392 SHDSDCFIFLLSIRAAGRGLNLQSADTVIIYDPDPNPKNEEQAVARAHRIGQKREVKVIY 1451
+S F+F+LS RA G G+NL +AD VI+YD D NP+ + QA+ RAHRIGQ + V+V
Sbjct: 547 EPNSTKFVFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQTKTVRVFR 606
Query: 1452 M-------EAVVDKISSHQKEDE--LRSGGTVDLEDDLAGKDRYIGSI 1490
E +V++ + D ++ G VD + GKD + I
Sbjct: 607 FITDNTVEERIVERAEMKLRLDSIVIQQGRLVDQNLNKIGKDEMLQMI 654
>sp|Q7G8Y3|ISW2_ORYSJ Probable chromatin-remodeling complex ATPase chain OS=Oryza sativa
subsp. japonica GN=Os01g0367900 PE=2 SV=2
Length = 1107
Score = 379 bits (974), Expect = e-103, Method: Compositional matrix adjust.
Identities = 201/477 (42%), Positives = 296/477 (62%), Gaps = 39/477 (8%)
Query: 980 SLAHAVNERVMRQPSMLRAGTLRDYQIVGLQWMLSLYNNKLNGILADEMGLGKTVQVMAL 1039
+LA + R++ QPS ++ G +RDYQ+ GL W++ LY N +NGILADEMGLGKT+Q ++L
Sbjct: 211 ALAGSGGTRLLSQPSCIK-GKMRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISL 269
Query: 1040 IAYLMEFKGNYGPHLIIVPNAVLVNWKSELHKWLPSVSCIYYVGAKDQRSRLFSQEVAAL 1099
+ YL EF+G GPH+++ P + L NW E+ ++ P + + ++G ++R+ + +
Sbjct: 270 LGYLHEFRGITGPHMVVAPKSTLGNWIKEIQRFCPILRAVKFLGNPEERNHIRENLLQPG 329
Query: 1100 KFNVLVTTYEFIMYDRSKLSKVDWKYIIIDEAQRMKDRESVLARDLDRYRCQRRLLLTGT 1159
KF+V VT++E + +++ L + W+YIIIDEA R+K+ S+L++ + Y RLL+TGT
Sbjct: 330 KFDVCVTSFEMAIKEKTTLKRFSWRYIIIDEAHRIKNENSLLSKTMRIYNTNYRLLITGT 389
Query: 1160 PLQNDLKELWSLLNLLLPEVFDNRKAFHDWFSQPFQKEGPTHNADDDWLETEKKVIIIHR 1219
PLQN+L ELWSLLN LLPE+F + + F +W FQ G + ++ +
Sbjct: 390 PLQNNLHELWSLLNFLLPEIFSSAETFDEW----FQISGENDQQE-----------VVQQ 434
Query: 1220 LHQILEPFMLRRRVEDVEGSLPPKVSIVLRCRMSAIQSAIYDWIKATGTLRVDPEDEKRR 1279
LH++L PF+LRR DVE LPPK +L+ MS +Q Y + ++ E++R
Sbjct: 435 LHKVLRPFLLRRLKSDVEKGLPPKKETILKVGMSQMQKQYYRALLQKDLEVINAGGERKR 494
Query: 1280 VQKNPIYQAKVYKTLNNRCMELRKTCNHPLL------NYPYFSDLSKDFLVKSCGKLWIL 1333
L N M+LRK CNHP L PY + + LV++ GK+ +L
Sbjct: 495 --------------LLNIAMQLRKCCNHPYLFQGAEPGPPY---TTGEHLVENAGKMVLL 537
Query: 1334 DRILIKLQRTGHRVLLFSTMTKLLDILEEYLQWRQLVYRRIDGTTSLEDRESAIVDFNSH 1393
D++L KL+ RVL+FS MT+LLDILE+YL +R Y RIDG T EDR+++I FN
Sbjct: 538 DKLLPKLKDRDSRVLIFSQMTRLLDILEDYLMYRGYQYCRIDGNTGGEDRDASIEAFNKP 597
Query: 1394 DSDCFIFLLSIRAAGRGLNLQSADTVIIYDPDPNPKNEEQAVARAHRIGQKREVKVI 1450
S+ F+FLLS RA G G+NL +AD V++YD D NP+ + QA RAHRIGQK+EV+V
Sbjct: 598 GSEKFVFLLSTRAGGLGINLATADVVVLYDSDWNPQADLQAQDRAHRIGQKKEVQVF 654
>sp|Q8RWY3|ISW2_ARATH Putative chromatin-remodeling complex ATPase chain OS=Arabidopsis
thaliana GN=At3g06400 PE=2 SV=3
Length = 1055
Score = 379 bits (972), Expect = e-103, Method: Compositional matrix adjust.
Identities = 198/476 (41%), Positives = 297/476 (62%), Gaps = 39/476 (8%)
Query: 981 LAHAVNERVMRQPSMLRAGTLRDYQIVGLQWMLSLYNNKLNGILADEMGLGKTVQVMALI 1040
L + N R++ QPS ++ G +RDYQ+ GL W++ LY N +NGILADEMGLGKT+Q ++L+
Sbjct: 170 LTGSGNTRLLTQPSCIQ-GKMRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLL 228
Query: 1041 AYLMEFKGNYGPHLIIVPNAVLVNWKSELHKWLPSVSCIYYVGAKDQRSRLFSQEVAALK 1100
AYL E++G GPH+++ P + L NW +E+ ++ P + + ++G ++R + + A K
Sbjct: 229 AYLHEYRGINGPHMVVAPKSTLGNWMNEIRRFCPVLRAVKFLGNPEERRHIREDLLVAGK 288
Query: 1101 FNVLVTTYEFIMYDRSKLSKVDWKYIIIDEAQRMKDRESVLARDLDRYRCQRRLLLTGTP 1160
F++ VT++E + +++ L + W+YIIIDEA R+K+ S+L++ + + RLL+TGTP
Sbjct: 289 FDICVTSFEMAIKEKTALRRFSWRYIIIDEAHRIKNENSLLSKTMRLFSTNYRLLITGTP 348
Query: 1161 LQNDLKELWSLLNLLLPEVFDNRKAFHDWFSQPFQKEGPTHNADDDWLETEKKVIIIHRL 1220
LQN+L ELW+LLN LLPE+F + + F +W FQ G + ++ +L
Sbjct: 349 LQNNLHELWALLNFLLPEIFSSAETFDEW----FQISGENDQQE-----------VVQQL 393
Query: 1221 HQILEPFMLRRRVEDVEGSLPPKVSIVLRCRMSAIQSAIYDWIKATGTLRVDPEDEKRRV 1280
H++L PF+LRR DVE LPPK +L+ MS +Q Y + V+ E++R
Sbjct: 394 HKVLRPFLLRRLKSDVEKGLPPKKETILKVGMSQMQKQYYKALLQKDLEAVNAGGERKR- 452
Query: 1281 QKNPIYQAKVYKTLNNRCMELRKTCNHPLL------NYPYFSDLSKDFLVKSCGKLWILD 1334
L N M+LRK CNHP L PY + D L+ + GK+ +LD
Sbjct: 453 -------------LLNIAMQLRKCCNHPYLFQGAEPGPPY---TTGDHLITNAGKMVLLD 496
Query: 1335 RILIKLQRTGHRVLLFSTMTKLLDILEEYLQWRQLVYRRIDGTTSLEDRESAIVDFNSHD 1394
++L KL+ RVL+FS MT+LLDILE+YL +R +Y RIDG T ++R+++I +N
Sbjct: 497 KLLPKLKERDSRVLIFSQMTRLLDILEDYLMYRGYLYCRIDGNTGGDERDASIEAYNKPG 556
Query: 1395 SDCFIFLLSIRAAGRGLNLQSADTVIIYDPDPNPKNEEQAVARAHRIGQKREVKVI 1450
S+ F+FLLS RA G G+NL +AD VI+YD D NP+ + QA RAHRIGQK+EV+V
Sbjct: 557 SEKFVFLLSTRAGGLGINLATADVVILYDSDWNPQVDLQAQDRAHRIGQKKEVQVF 612
>sp|P38144|ISW1_YEAST ISWI chromatin-remodeling complex ATPase ISW1 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=ISW1 PE=1 SV=2
Length = 1129
Score = 365 bits (936), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 207/459 (45%), Positives = 290/459 (63%), Gaps = 35/459 (7%)
Query: 999 GTLRDYQIVGLQWMLSLYNNKLNGILADEMGLGKTVQVMALIAYLMEFKGNYGPHLIIVP 1058
G LR YQI G+ W++SL+ NK+ GILADEMGLGKT+Q ++ + YL + GP L+I P
Sbjct: 194 GQLRPYQIQGVNWLVSLHKNKIAGILADEMGLGKTLQTISFLGYLRYIEKIPGPFLVIAP 253
Query: 1059 NAVLVNWKSELHKWLPSVSCIYYVGAKDQRSRLFSQEVAALKFNVLVTTYEFIMYDRSKL 1118
+ L NW E+++W P V+ G K++R+ L +++ F+V++ +YE I+ ++S L
Sbjct: 254 KSTLNNWLREINRWTPDVNAFILQGDKEERAELIQKKLLGCDFDVVIASYEIIIREKSPL 313
Query: 1119 SKVDWKYIIIDEAQRMKDRESVLARDLDRYRCQRRLLLTGTPLQNDLKELWSLLNLLLPE 1178
K++W+YIIIDEA R+K+ ES+L++ L + + RLL+TGTPLQN+L ELW+LLN LLP+
Sbjct: 314 KKINWEYIIIDEAHRIKNEESMLSQVLREFTSRNRLLITGTPLQNNLHELWALLNFLLPD 373
Query: 1179 VFDNRKAFHDWFSQPFQKEGPTHNADDDWLETEKKVIIIHRLHQILEPFMLRRRVEDVEG 1238
+F + + F DWFS +E D D I+ +LH +L+PF+LRR DVE
Sbjct: 374 IFSDAQDFDDWFSSESTEE------DQD--------KIVKQLHTVLQPFLLRRIKSDVET 419
Query: 1239 SLPPKVSIVLRCRMSAIQSAIYDWIKATGTLRVDPEDEKRRVQKNPIYQAKVYKT-LNNR 1297
SL PK + L MS++Q Y I EK N +K KT L N
Sbjct: 420 SLLPKKELNLYVGMSSMQKKWYKKIL-----------EKDLDAVNGSNGSKESKTRLLNI 468
Query: 1298 CMELRKTCNHPLL------NYPYFSDLSKDFLVKSCGKLWILDRILIKLQRTGHRVLLFS 1351
M+LRK CNHP L PY +D + LV + KL +LD++L KL+ G RVL+FS
Sbjct: 469 MMQLRKCCNHPYLFDGAEPGPPYTTD---EHLVYNAAKLQVLDKLLKKLKEEGSRVLIFS 525
Query: 1352 TMTKLLDILEEYLQWRQLVYRRIDGTTSLEDRESAIVDFNSHDSDCFIFLLSIRAAGRGL 1411
M++LLDILE+Y +R Y RIDG+T+ EDR AI D+N+ DS F+FLL+ RA G G+
Sbjct: 526 QMSRLLDILEDYCYFRNYEYCRIDGSTAHEDRIQAIDDYNAPDSKKFVFLLTTRAGGLGI 585
Query: 1412 NLQSADTVIIYDPDPNPKNEEQAVARAHRIGQKREVKVI 1450
NL SAD V++YD D NP+ + QA+ RAHRIGQK++VKV
Sbjct: 586 NLTSADVVVLYDSDWNPQADLQAMDRAHRIGQKKQVKVF 624
>sp|Q9NRZ9|HELLS_HUMAN Lymphoid-specific helicase OS=Homo sapiens GN=HELLS PE=1 SV=1
Length = 838
Score = 356 bits (913), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 212/560 (37%), Positives = 309/560 (55%), Gaps = 68/560 (12%)
Query: 990 MRQPSMLRAGTLRDYQIVGLQWMLSLYNNKLNGILADEMGLGKTVQVMALIAYLMEFKGN 1049
+QP G +R YQ+ G++W+ L+ N +NGILADEMGLGKTVQ +A IA +++ +G
Sbjct: 212 FQQPKHFTGGVMRWYQVEGMEWLRMLWENGINGILADEMGLGKTVQCIATIALMIQ-RGV 270
Query: 1050 YGPHLIIVPNAVLVNWKSELHKWLPSVSCIYYVGAKDQRSRL---FSQEVAALKFN-VLV 1105
GP L+ P + L NW +E ++ P + + Y G +++R +L + L+ + V++
Sbjct: 271 PGPFLVCGPLSTLPNWMAEFKRFTPDIPTMLYHGTQEERQKLVRNIYKRKGTLQIHPVVI 330
Query: 1106 TTYEFIMYDRSKLSKVDWKYIIIDEAQRMKDRESVLARDLDRYRCQRRLLLTGTPLQNDL 1165
T++E M DR+ L WKY+I+DE R+K+ + L R+L R+ +LLLTGTPLQN+L
Sbjct: 331 TSFEIAMRDRNALQHCYWKYLIVDEGHRIKNMKCRLIRELKRFNADNKLLLTGTPLQNNL 390
Query: 1166 KELWSLLNLLLPEVFDNRKAFHDWFSQPFQKEGPTHNADDDWLETEKKVIIIHRLHQILE 1225
ELWSLLN LLP+VFD+ K+F WF E +D + E++ ++H LHQIL
Sbjct: 391 SELWSLLNFLLPDVFDDLKSFESWFDITSLSE-----TAEDIIAKEREQNVLHMLHQILT 445
Query: 1226 PFMLRRRVEDVEGSLPPKVSIVLRCRMSAIQSAIYDWI---------------------- 1263
PF+LRR DV +PPK +V+ +S Q Y I
Sbjct: 446 PFLLRRLKSDVALEVPPKREVVVYAPLSKKQEIFYTAIVNRTIANMFGSSEKETIELSPT 505
Query: 1264 --------KATGTLRVD--------------PEDEKRR--VQKNPIYQAKVYKTLNNRCM 1299
K+ ++D PE ++ R V+ N +++V L N M
Sbjct: 506 GRPKRRTRKSINYSKIDDFPNELEKLISQIQPEVDRERAVVEVNIPVESEVNLKLQNIMM 565
Query: 1300 ELRKTCNHP-LLNYPYFSDLSKDF-----LVKSCGKLWILDRILIKLQRTGHRVLLFSTM 1353
LRK CNHP L+ YP ++++F LV + GK ILDR+L +L++ GH+VLLFS M
Sbjct: 566 LLRKCCNHPYLIEYP-IDPVTQEFKIDEELVTNSGKFLILDRMLPELKKRGHKVLLFSQM 624
Query: 1354 TKLLDILEEYLQWRQLVYRRIDGTTSLEDRESAIVDFNSHDSDCFIFLLSIRAAGRGLNL 1413
T +LDIL +Y R + R+DG+ S +RE + FN+ D + FIFL+S RA G G+NL
Sbjct: 625 TSMLDILMDYCHLRDFNFSRLDGSMSYSEREKNMHSFNT-DPEVFIFLVSTRAGGLGINL 683
Query: 1414 QSADTVIIYDPDPNPKNEEQAVARAHRIGQKREVKVIYMEAVVDKISSHQKEDELRSGGT 1473
+ADTVIIYD D NP+++ QA R HRIGQ + V V+Y + I E R+
Sbjct: 684 TAADTVIIYDSDWNPQSDLQAQDRCHRIGQTKPV-VVYRLVTANTIDQKIVE---RAAAK 739
Query: 1474 VDLEDDLAGKDRYIGSIEGL 1493
LE + K+ + G GL
Sbjct: 740 RKLEKLIIHKNHFKGGQSGL 759
>sp|Q7KU24|CHD1_DROME Chromodomain-helicase-DNA-binding protein 1 OS=Drosophila
melanogaster GN=Chd1 PE=1 SV=1
Length = 1883
Score = 355 bits (911), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 194/480 (40%), Positives = 277/480 (57%), Gaps = 48/480 (10%)
Query: 988 RVMRQPSMLRAG-TLRDYQIVGLQWMLSLYNNKLNGILADEMGLGKTVQVMALIAYLMEF 1046
R+ QP L +G TLRDYQ+ GL W+L + + + ILADEMGLGKT+Q + + L +
Sbjct: 514 RIKNQPEFLSSGLTLRDYQMDGLNWLLHSWCKENSVILADEMGLGKTIQTICFLYSLFKI 573
Query: 1047 KGNYGPHLIIVPNAVLVNWKSELHKWLPSVSCIYYVGAKDQRSRLFSQEV-------AAL 1099
YGP L +VP + + W+ E W P ++ + Y+G D +SR Q+ L
Sbjct: 574 HHLYGPFLCVVPLSTMTAWQREFDLWAPDMNVVTYLG--DIKSRELIQQYEWQFESSKRL 631
Query: 1100 KFNVLVTTYEFIMYDRSKLSKVDWKYIIIDEAQRMKDRESVLARDLDRYRCQRRLLLTGT 1159
KFN ++TTYE ++ D+ L + W +++DEA R+K+ +S+L + L + RLL+TGT
Sbjct: 632 KFNCILTTYEIVLKDKQFLGTLQWAALLVDEAHRLKNDDSLLYKSLKEFDTNHRLLITGT 691
Query: 1160 PLQNDLKELWSLLNLLLPEVFDNRKAFHDWFSQPFQKEGPTHNADDDWLETEKKVIIIHR 1219
PLQN LKELW+LL+ ++P+ FD + F E NA+D R
Sbjct: 692 PLQNSLKELWALLHFIMPDKFDTWENF----------EVQHGNAEDKGYT---------R 732
Query: 1220 LHQILEPFMLRRRVEDVEGSLPPKVSIVLRCRMSAIQSAIYDWIKATGTLRVDPEDEKRR 1279
LHQ LEP++LRR +DVE SLP KV +LR M+++Q Y WI D R+
Sbjct: 733 LHQQLEPYILRRVKKDVEKSLPAKVEQILRVEMTSLQKQYYKWILTKNF------DALRK 786
Query: 1280 VQKNPIYQAKVYKTLNNRCMELRKTCNHPLLNYPYFSDL-------SKDFLVKSCGKLWI 1332
++ T N +EL+K CNH L P +L + L+K GKL +
Sbjct: 787 GKRGST------STFLNIVIELKKCCNHAALIRPSEFELMGLQQDEALQTLLKGSGKLVL 840
Query: 1333 LDRILIKLQRTGHRVLLFSTMTKLLDILEEYLQWRQLVYRRIDGTTSLEDRESAIVDFNS 1392
LD++L +L+ TGHRVL+FS M ++LD+L +YLQ R ++R+DG+ E R A+ FN+
Sbjct: 841 LDKLLCRLKETGHRVLIFSQMVRMLDVLADYLQKRHFPFQRLDGSIKGEMRRQALDHFNA 900
Query: 1393 HDSDCFIFLLSIRAAGRGLNLQSADTVIIYDPDPNPKNEEQAVARAHRIGQKREVKVIYM 1452
S F FLLS RA G G+NL +ADTVII+D D NP+N+ QA ARAHRIGQK +V + +
Sbjct: 901 EGSQDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAQARAHRIGQKNQVNIYRL 960
>sp|Q60848|HELLS_MOUSE Lymphocyte-specific helicase OS=Mus musculus GN=Hells PE=1 SV=2
Length = 821
Score = 355 bits (910), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 211/560 (37%), Positives = 307/560 (54%), Gaps = 68/560 (12%)
Query: 990 MRQPSMLRAGTLRDYQIVGLQWMLSLYNNKLNGILADEMGLGKTVQVMALIAYLMEFKGN 1049
+QP G +R YQ+ G++W+ L+ N +NGILADEMGLGKTVQ +A IA +++ +G
Sbjct: 195 FQQPKHFTGGVMRWYQVEGMEWLRMLWENGINGILADEMGLGKTVQCIATIALMIQ-RGV 253
Query: 1050 YGPHLIIVPNAVLVNWKSELHKWLPSVSCIYYVGAKDQRSRL---FSQEVAALKFN-VLV 1105
GP L+ P + L NW +E ++ P + + Y G ++ R +L + L+ + V+V
Sbjct: 254 PGPFLVCGPLSTLPNWMAEFKRFTPEIPTLLYHGTREDRRKLVKNIHKRQGTLQIHPVVV 313
Query: 1106 TTYEFIMYDRSKLSKVDWKYIIIDEAQRMKDRESVLARDLDRYRCQRRLLLTGTPLQNDL 1165
T++E M D++ L WKY+I+DE R+K+ + L R+L R+ +LLLTGTPLQN+L
Sbjct: 314 TSFEIAMRDQNALQHCYWKYLIVDEGHRIKNMKCRLIRELKRFNADNKLLLTGTPLQNNL 373
Query: 1166 KELWSLLNLLLPEVFDNRKAFHDWFSQPFQKEGPTHNADDDWLETEKKVIIIHRLHQILE 1225
ELWSLLN LLP+VFD+ K+F WF E +D + E++ ++H LHQIL
Sbjct: 374 SELWSLLNFLLPDVFDDLKSFESWFDITSLSE-----TAEDIIAKEREQNVLHMLHQILT 428
Query: 1226 PFMLRRRVEDVEGSLPPKVSIVLRCRMSAIQSAIYDWI-------------KATGTL--- 1269
PF+LRR DV +PPK +V+ + Q Y I K T L
Sbjct: 429 PFLLRRLKSDVALEVPPKREVVVYAPLCNKQEIFYTAIVNRTIANMFGSCEKETVELSPT 488
Query: 1270 ----------------------------RVDPEDEKRR--VQKNPIYQAKVYKTLNNRCM 1299
++ PE + R V+ N +++V L N M
Sbjct: 489 GRPKRRSRKSINYSELDQFPSELEKLISQIQPEVNRERTVVEGNIPIESEVNLKLRNIMM 548
Query: 1300 ELRKTCNHP-LLNYPYFSDLSKDF-----LVKSCGKLWILDRILIKLQRTGHRVLLFSTM 1353
LRK CNHP ++ YP ++++F LV + GK ILDR+L +L++ GH+VL+FS M
Sbjct: 549 LLRKCCNHPYMIEYP-IDPVTQEFKIDEELVTNSGKFLILDRMLPELKKRGHKVLVFSQM 607
Query: 1354 TKLLDILEEYLQWRQLVYRRIDGTTSLEDRESAIVDFNSHDSDCFIFLLSIRAAGRGLNL 1413
T +LDIL +Y R ++ R+DG+ S +RE I FN+ D D F+FL+S RA G G+NL
Sbjct: 608 TSMLDILMDYCHLRNFIFSRLDGSMSYSEREKNIYSFNT-DPDVFLFLVSTRAGGLGINL 666
Query: 1414 QSADTVIIYDPDPNPKNEEQAVARAHRIGQKREVKVIYMEAVVDKISSHQKEDELRSGGT 1473
+ADTVIIYD D NP+++ QA R HRIGQ + V V+Y + I E R+
Sbjct: 667 TAADTVIIYDSDWNPQSDLQAQDRCHRIGQTKPV-VVYRLVTANTIDQKIVE---RAAAK 722
Query: 1474 VDLEDDLAGKDRYIGSIEGL 1493
LE + K+ + G GL
Sbjct: 723 RKLEKLIIHKNHFKGGQSGL 742
>sp|O14647|CHD2_HUMAN Chromodomain-helicase-DNA-binding protein 2 OS=Homo sapiens GN=CHD2
PE=1 SV=2
Length = 1828
Score = 349 bits (895), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 190/483 (39%), Positives = 281/483 (58%), Gaps = 56/483 (11%)
Query: 989 VMRQPSMLRAGTL--RDYQIVGLQWMLSLYNNKLNGILADEMGLGKTVQVMALIAYLMEF 1046
+ +QP+ L L RDYQ+ GL W+ + + ILADEMGLGKT+Q ++ ++YL
Sbjct: 470 LKKQPAYLGGENLELRDYQLEGLNWLAHSWCKNNSVILADEMGLGKTIQTISFLSYLFHQ 529
Query: 1047 KGNYGPHLIIVPNAVLVNWKSELHKWLPSVSCIYYVGAKDQRSRLFSQE-----VAALKF 1101
YGP LI+VP + L +W+ E W P ++ + Y+G R+ + E LKF
Sbjct: 530 HQLYGPFLIVVPLSTLTSWQREFEIWAPEINVVVYIGDLMSRNTIREYEWIHSQTKRLKF 589
Query: 1102 NVLVTTYEFIMYDRSKLSKVDWKYIIIDEAQRMKDRESVLARDLDRYRCQRRLLLTGTPL 1161
N L+TTYE ++ D++ L ++W ++ +DEA R+K+ +S+L + L ++ RLL+TGTPL
Sbjct: 590 NALITTYEILLKDKTVLGSINWAFLGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPL 649
Query: 1162 QNDLKELWSLLNLLLPEVFDNRKAFHDWFSQPFQKEGPTHNADDDWLETEKKVIIIHRLH 1221
QN LKELWSLL+ ++PE F+ F + F+++ + LH
Sbjct: 650 QNSLKELWSLLHFIMPEKFE--------FWEDFEEDHGKGRENG-----------YQSLH 690
Query: 1222 QILEPFMLRRRVEDVEGSLPPKVSIVLRCRMSAIQSAIYDWIKATGTLRVDPEDEKRRVQ 1281
++LEPF+LRR +DVE SLP KV +LR MSA+Q Y WI +
Sbjct: 691 KVLEPFLLRRVKKDVEKSLPAKVEQILRVEMSALQKQYYKWI----------------LT 734
Query: 1282 KNPIYQAKVYKT------LNNRCMELRKTCNHPLLNYPYFSDLSKD------FLVKSCGK 1329
+N Y+A T N MEL+K CNH L P + ++ L++S GK
Sbjct: 735 RN--YKALAKGTRGSTSGFLNIVMELKKCCNHCYLIKPPEENERENGQEILLSLIRSSGK 792
Query: 1330 LWILDRILIKLQRTGHRVLLFSTMTKLLDILEEYLQWRQLVYRRIDGTTSLEDRESAIVD 1389
L +LD++L +L+ G+RVL+FS M ++LDIL EYL + ++R+DG+ E R+ A+
Sbjct: 793 LILLDKLLTRLRERGNRVLIFSQMVRMLDILAEYLTIKHYPFQRLDGSIKGEIRKQALDH 852
Query: 1390 FNSHDSDCFIFLLSIRAAGRGLNLQSADTVIIYDPDPNPKNEEQAVARAHRIGQKREVKV 1449
FN+ S+ F FLLS RA G G+NL SADTV+I+D D NP+N+ QA ARAHRIGQK++V +
Sbjct: 853 FNADGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQVNI 912
Query: 1450 IYM 1452
+
Sbjct: 913 YRL 915
>sp|P32657|CHD1_YEAST Chromo domain-containing protein 1 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=CHD1 PE=1 SV=1
Length = 1468
Score = 349 bits (895), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 192/491 (39%), Positives = 283/491 (57%), Gaps = 64/491 (13%)
Query: 987 ERVMRQPSMLRAGTLRDYQIVGLQWMLSLYNNKLNGILADEMGLGKTVQVMALIAYLMEF 1046
E++ QP ++ G LRD+Q+ G+ WM L++ NGILADEMGLGKTVQ +A I++L+
Sbjct: 362 EKLSVQPPFIKGGELRDFQLTGINWMAFLWSKGDNGILADEMGLGKTVQTVAFISWLIFA 421
Query: 1047 KGNYGPHLIIVPNAVLVNWKSELHKWLPSVSCIYYVGAKDQRSRLFSQEV---------A 1097
+ GPH+I+VP + + W KW P ++CI Y+G + R + E
Sbjct: 422 RRQNGPHIIVVPLSTMPAWLDTFEKWAPDLNCICYMGNQKSRDTIREYEFYTNPRAKGKK 481
Query: 1098 ALKFNVLVTTYEFIMYDRSKLSKVDWKYIIIDEAQRMKDRESVLARDLDRYRCQRRLLLT 1157
+KFNVL+TTYE+I+ DR++L + W+++ +DEA R+K+ ES L L+ ++ R+L+T
Sbjct: 482 TMKFNVLLTTYEYILKDRAELGSIKWQFMAVDEAHRLKNAESSLYESLNSFKVANRMLIT 541
Query: 1158 GTPLQNDLKELWSLLNLLLPEVFDNRKAFHDWFSQPFQKEGPTHNADDDWLETEKKVIII 1217
GTPLQN++KEL +L+N L+P F +E N D++ E I
Sbjct: 542 GTPLQNNIKELAALVNFLMPGRF------------TIDQEIDFENQDEEQEE------YI 583
Query: 1218 HRLHQILEPFMLRRRVEDVEGSLPPKVSIVLRCRMSAIQSAIYDWIKATGTLRVDPEDEK 1277
H LH+ ++PF+LRR +DVE SLP K +LR +S +Q+ Y K
Sbjct: 584 HDLHRRIQPFILRRLKKDVEKSLPSKTERILRVELSDVQTEYY----------------K 627
Query: 1278 RRVQKNPIYQAKV------YKTLNNRCMELRKTCNHPLLNYPYFSDLSKDF--------- 1322
+ KN Y A + +L N EL+K NHP L + + F
Sbjct: 628 NILTKN--YSALTAGAKGGHFSLLNIMNELKKASNHPYLFDNAEERVLQKFGDGKMTREN 685
Query: 1323 ----LVKSCGKLWILDRILIKLQRTGHRVLLFSTMTKLLDILEEYLQWRQLVYRRIDGTT 1378
L+ S GK+ +LD++L +L++ GHRVL+FS M ++LDIL +YL + + ++R+DGT
Sbjct: 686 VLRGLIMSSGKMVLLDQLLTRLKKDGHRVLIFSQMVRMLDILGDYLSIKGINFQRLDGTV 745
Query: 1379 SLEDRESAIVDFNSHDSDCFIFLLSIRAAGRGLNLQSADTVIIYDPDPNPKNEEQAVARA 1438
R +I FNS DS+ F+FLLS RA G G+NL +ADTV+I+D D NP+ + QA+ARA
Sbjct: 746 PSAQRRISIDHFNSPDSNDFVFLLSTRAGGLGINLMTADTVVIFDSDWNPQADLQAMARA 805
Query: 1439 HRIGQKREVKV 1449
HRIGQK V V
Sbjct: 806 HRIGQKNHVMV 816
>sp|Q9US25|HRP1_SCHPO Chromodomain helicase hrp1 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=hrp1 PE=1 SV=1
Length = 1373
Score = 344 bits (883), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 198/479 (41%), Positives = 282/479 (58%), Gaps = 47/479 (9%)
Query: 988 RVMRQPSMLRAGTLRDYQIVGLQWMLSLYNNKLNGILADEMGLGKTVQVMALIAYLMEFK 1047
++ +QPS ++ G +RD+Q+ G+ WM L++ NGILADEMGLGKTVQ + ++YL+
Sbjct: 377 KLEKQPSYIKGGEIRDFQLTGINWMAYLWHRNENGILADEMGLGKTVQTVCFLSYLVHSL 436
Query: 1048 GNYGPHLIIVPNAVLVNWKSELHKWLPSVSCIYYVGAKDQRSRL------FSQEVAALKF 1101
+GP LI+VP + + W+ L W P ++ I Y G + R+ + S LKF
Sbjct: 437 KQHGPFLIVVPLSTVPAWQETLANWTPDLNSICYTGNTESRANIREYEFYLSTNSRKLKF 496
Query: 1102 NVLVTTYEFIMYDRSKLSKVDWKYIIIDEAQRMKDRESVLARDLDRYRCQRRLLLTGTPL 1161
N+L+TTYE+I+ D+ +L+ + W+Y+ IDEA R+K+ ES L L ++R RLL+TGTPL
Sbjct: 497 NILLTTYEYILKDKQELNNIRWQYLAIDEAHRLKNSESSLYETLSQFRTANRLLITGTPL 556
Query: 1162 QNDLKELWSLLNLLLPEVFDNRKAFHDWFSQPFQKEGPTHNADDDWLETEKKVIIIHRLH 1221
QN+LKEL SL+N L+P F R + F QP NA E E+ I L
Sbjct: 557 QNNLKELASLVNFLMPGKFYIRDELN--FDQP--------NA-----EQERD---IRDLQ 598
Query: 1222 QILEPFMLRRRVEDVEGSLPPKVSIVLRCRMSAIQSAIYDWIKATGTLRVDPEDEKRRVQ 1281
+ L+PF+LRR +DVE SLP K +LR +S +Q+ Y I T R R Q
Sbjct: 599 ERLQPFILRRLKKDVEKSLPSKSERILRVELSDMQTEWYKNI-LTKNYRALTGHTDGRGQ 657
Query: 1282 KNPIYQAKVYKTLNNRCMELRKTCNHPLLNYPYFSD--------LSKDFL---VKSCGKL 1330
+L N +EL+K NHP L +P ++ +D L + + GK+
Sbjct: 658 L----------SLLNIVVELKKVSNHPYL-FPGAAEKWMMGRKMTREDTLRGIIMNSGKM 706
Query: 1331 WILDRILIKLQRTGHRVLLFSTMTKLLDILEEYLQWRQLVYRRIDGTTSLEDRESAIVDF 1390
+LD++L +L+ GHRVL+FS M ++L+IL EY+ R Y+R+DGT R +I F
Sbjct: 707 VLLDKLLQRLKHDGHRVLIFSQMVRMLNILGEYMSLRGYNYQRLDGTIPASVRRVSIDHF 766
Query: 1391 NSHDSDCFIFLLSIRAAGRGLNLQSADTVIIYDPDPNPKNEEQAVARAHRIGQKREVKV 1449
N+ DS F+FLLS RA G G+NL +ADTVII+D D NP+ + QA+ARAHRIGQK V V
Sbjct: 767 NAPDSPDFVFLLSTRAGGLGINLNTADTVIIFDSDWNPQADLQAMARAHRIGQKNHVNV 825
>sp|B6ZLK2|CHD1_CHICK Chromodomain-helicase-DNA-binding protein 1 OS=Gallus gallus GN=CHD1
PE=1 SV=1
Length = 1719
Score = 335 bits (859), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 225/621 (36%), Positives = 336/621 (54%), Gaps = 92/621 (14%)
Query: 863 KRMEALKNNDVERYREMLLEQQTSIPGDAAERYAVLSSFLTQTEEYLYKLGSKITAAKNQ 922
K+++ K D E R + + + P D Y LT Y++ +I A NQ
Sbjct: 343 KKLDNYKKKDQETKRWL----KNASPEDV--EYYNCQQELTDDLHKQYQIVERIIAHSNQ 396
Query: 923 QEVEEAANAAAAAARLQGLSEEEVRSAAACAGEE-VMIRNRF---LEMNAPRDGSSVNKY 978
+ AA + QGL E C+ E+ +I +F ++ R+ S +
Sbjct: 397 KS---AAGYPDYYCKWQGLPYSE------CSWEDGALIAKKFQARIDEYFSRNQSKTTPF 447
Query: 979 YSLAHAVNER-----VMRQPSML---RAGTLRDYQIVGLQWMLSLYNNKLNGILADEMGL 1030
+ +R + +QPS + + LRDYQ+ GL W+ + + ILADEMGL
Sbjct: 448 KDCK-VLKQRPRFVALKKQPSYIGGHESLELRDYQLNGLNWLAHSWCKGNSCILADEMGL 506
Query: 1031 GKTVQVMALIAYLMEFKGNYGPHLIIVPNAVLVNWKSELHKWLPSVSCIYYVGAKDQRSR 1090
GKT+Q ++ + YL YGP L++VP + L +W+ E+ W P ++ + Y+G R+
Sbjct: 507 GKTIQTISFLNYLFHEHQLYGPFLLVVPLSTLTSWQREIQTWAPQMNAVVYLGDITSRNM 566
Query: 1091 LFSQE-----VAALKFNVLVTTYEFIMYDRSKLSKVDWKYIIIDEAQRMKDRESVLARDL 1145
+ + E LKFN+L+TTYE ++ D+S L ++W +I +DEA R+K+ +S+L + L
Sbjct: 567 IRTHEWMHPQTKRLKFNILLTTYEILLKDKSFLGGLNWAFIGVDEAHRLKNDDSLLYKTL 626
Query: 1146 DRYRCQRRLLLTGTPLQNDLKELWSLLNLLLPEVFDNRKAFHDWFSQPFQKEGPTHNADD 1205
++ RLL+TGTPLQN LKELWSLL+ ++PE F + W + F++E H
Sbjct: 627 IDFKSNHRLLITGTPLQNSLKELWSLLHFIMPEKFSS------W--EDFEEE---HGKGR 675
Query: 1206 DWLETEKKVIIIHRLHQILEPFMLRRRVEDVEGSLPPKVSIVLRCRMSAIQSAIYDWIKA 1265
++ LH+ LEPF+LRR +DVE SLP KV +LR MSA+Q Y WI
Sbjct: 676 EYGYAS--------LHKELEPFLLRRVKKDVEKSLPAKVEQILRMEMSALQKQYYKWI-- 725
Query: 1266 TGTLRVDPEDEKRRVQKNPIYQAKVYKTLN-----------NRCMELRKTCNHPLLNYP- 1313
+ +N YK L+ N MEL+K CNH L P
Sbjct: 726 --------------LTRN-------YKALSKGSKGSTSGFLNIMMELKKCCNHCYLIKPP 764
Query: 1314 -----YFSDLSKDFLVKSCGKLWILDRILIKLQRTGHRVLLFSTMTKLLDILEEYLQWRQ 1368
Y + L++S GKL +LD++LI+L+ G+RVL+FS M ++LDIL EYL++RQ
Sbjct: 765 DDNEFYNKQEALQHLIRSSGKLILLDKLLIRLRERGNRVLIFSQMVRMLDILAEYLKYRQ 824
Query: 1369 LVYRRIDGTTSLEDRESAIVDFNSHDSDCFIFLLSIRAAGRGLNLQSADTVIIYDPDPNP 1428
++R+DG+ E R+ A+ FN+ S+ F FLLS RA G G+NL SADTV+I+D D NP
Sbjct: 825 FPFQRLDGSIKGELRKQALDHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNP 884
Query: 1429 KNEEQAVARAHRIGQKREVKV 1449
+N+ QA ARAHRIGQK++V +
Sbjct: 885 QNDLQAQARAHRIGQKKQVNI 905
>sp|Q9XFH4|DDM1_ARATH ATP-dependent DNA helicase DDM1 OS=Arabidopsis thaliana GN=DDM1 PE=1
SV=1
Length = 764
Score = 332 bits (850), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 208/574 (36%), Positives = 315/574 (54%), Gaps = 45/574 (7%)
Query: 894 RYAVLSSFLTQTE---EYLYKLGSKITAAKNQQEVEEAANAAAAAARLQGLSEEEVRSAA 950
++ L LTQT+ E+L + IT + E ++A R + + + + A
Sbjct: 99 QFTKLDELLTQTQLYSEFLLEKMEDITINGIESESQKAEPEKTGRGRKRKAASQYNNTKA 158
Query: 951 ACAGEEVMIRNRFLEMNAPRDGSSVNKYYSLAHAVNERVMRQPSMLRAGTLRDYQIVGLQ 1010
A ++ R++ DG ++N + V + +L G L+ YQ+ G++
Sbjct: 159 KRAVAAMISRSK-------EDGETINSDLTEEETVIKLQNELCPLLTGGQLKSYQLKGVK 211
Query: 1011 WMLSLYNNKLNGILADEMGLGKTVQVMALIAYLMEFKGNY--GPHLIIVPNAVLVNWKSE 1068
W++SL+ N LNGILAD+MGLGKT+Q + +++L KGN GP+L+I P + L NW +E
Sbjct: 212 WLISLWQNGLNGILADQMGLGKTIQTIGFLSHL---KGNGLDGPYLVIAPLSTLSNWFNE 268
Query: 1069 LHKWLPSVSCIYYVGAKDQRSRLFSQEV---AALKFNVLVTTYEFIMYDRSK-LSKVDWK 1124
+ ++ PS++ I Y G K+QR L + + KF +++T+YE M D + L WK
Sbjct: 269 IARFTPSINAIIYHGDKNQRDELRRKHMPKTVGPKFPIVITSYEVAMNDAKRILRHYPWK 328
Query: 1125 YIIIDEAQRMKDRESVLARDLDRYRCQRRLLLTGTPLQNDLKELWSLLNLLLPEVFDNRK 1184
Y++IDE R+K+ + L R+L + +LLLTGTPLQN+L ELWSLLN +LP++F +
Sbjct: 329 YVVIDEGHRLKNHKCKLLRELKHLKMDNKLLLTGTPLQNNLSELWSLLNFILPDIFTSHD 388
Query: 1185 AFHDWFSQPFQKEGPTHNADDDWLETEKKVIIIHRLHQILEPFMLRRRVEDVEGSLPPKV 1244
F WF F ++ ++ E +++ ++ +LH IL PF+LRR DVE SLP K
Sbjct: 389 EFESWFD--FSEKNKNEATKEE--EEKRRAQVVSKLHGILRPFILRRMKCDVELSLPRKK 444
Query: 1245 SIVLRCRMSAIQSAIYDWIKATGTLRVDPEDEKRRVQKNPIYQAKVYKTLNNRCMELRKT 1304
I++ M+ Q + + TL + +N I LNN ++LRK
Sbjct: 445 EIIMYATMTDHQKKFQEHL-VNNTLEA-------HLGENAIRGQGWKGKLNNLVIQLRKN 496
Query: 1305 CNHP-LLN--------YPYFSDLSKDFLVKSCGKLWILDRILIKLQRTGHRVLLFSTMTK 1355
CNHP LL YP ++ V CGK +L+R+L++L H+VL+FS TK
Sbjct: 497 CNHPDLLQGQIDGSYLYPPVEEI-----VGQCGKFRLLERLLVRLFANNHKVLIFSQWTK 551
Query: 1356 LLDILEEYLQWRQLVYRRIDGTTSLEDRESAIVDFNSHDSDCFIFLLSIRAAGRGLNLQS 1415
LLDI++ Y + RIDG+ L++R I DF+ S C IFLLS RA G G+NL +
Sbjct: 552 LLDIMDYYFSEKGFEVCRIDGSVKLDERRRQIKDFSDEKSSCSIFLLSTRAGGLGINLTA 611
Query: 1416 ADTVIIYDPDPNPKNEEQAVARAHRIGQKREVKV 1449
ADT I+YD D NP+ + QA+ R HRIGQ + V V
Sbjct: 612 ADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHV 645
>sp|O14139|HRP3_SCHPO Chromodomain helicase hrp3 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=hrp3 PE=1 SV=1
Length = 1388
Score = 332 bits (850), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 188/483 (38%), Positives = 277/483 (57%), Gaps = 54/483 (11%)
Query: 988 RVMRQPSMLRAGTLRDYQIVGLQWMLSLYNNKLNGILADEMGLGKTVQVMALIAYLMEFK 1047
++ +QPS + G LRD+Q+ G+ WM L++ NGILADEMGLGKTVQ +A ++YL
Sbjct: 362 KLEQQPSYITGGELRDFQLTGVNWMAYLWHKNENGILADEMGLGKTVQTVAFLSYLAHSL 421
Query: 1048 GNYGPHLIIVPNAVLVNWKSELHKWLPSVSCIYYVGAKDQRSRLFSQEVAA-----LKFN 1102
+GP L++VP + + W+ L W ++CI Y+G R + E +KFN
Sbjct: 422 RQHGPFLVVVPLSTVPAWQETLALWASDMNCISYLGNTTSRQVIRDYEFYVDGTQKIKFN 481
Query: 1103 VLVTTYEFIMYDRSKLSKVDWKYIIIDEAQRMKDRESVLARDLDRYRCQRRLLLTGTPLQ 1162
+L+TTYE+++ DRS LS + W+Y+ IDEA R+K+ ES L L +++ RLL+TGTPLQ
Sbjct: 482 LLLTTYEYVLKDRSVLSNIKWQYMAIDEAHRLKNSESSLYEALSQFKNSNRLLITGTPLQ 541
Query: 1163 NDLKELWSLLNLLLPEVFDNRKAFHDWFSQPFQKEGPTHNADDDWLETEKKVIIIHRLHQ 1222
N+++EL +L++ L+P F+ R + E P E++ I L +
Sbjct: 542 NNIRELAALVDFLMPGKFEIR--------EEINLEAPD----------EEQEAYIRSLQE 583
Query: 1223 ILEPFMLRRRVEDVEGSLPPKVSIVLRCRMSAIQSAIYDWIKATGTLRVDPEDEKRRVQK 1282
L+P++LRR +DVE SLP K +LR +S +Q Y I T RV
Sbjct: 584 HLQPYILRRLKKDVEKSLPSKSERILRVELSDLQMYWYKNI-LTRNYRV----------L 632
Query: 1283 NPIYQAKVYKTLNNRCMELRKTCNHPLLNYPYFSDLSKDF----------------LVKS 1326
+ +L N +EL+K NHP L F + + + L+ +
Sbjct: 633 TQSISSGSQISLLNIVVELKKASNHPYL----FDGVEESWMQKINSQGRRDEVLKGLIMN 688
Query: 1327 CGKLWILDRILIKLQRTGHRVLLFSTMTKLLDILEEYLQWRQLVYRRIDGTTSLEDRESA 1386
GK+ +LD++L +L+R GHRVL+FS M ++LDIL +YL R ++R+DGT R ++
Sbjct: 689 SGKMVLLDKLLSRLRRDGHRVLIFSQMVRMLDILGDYLSLRGYPHQRLDGTVPAAVRRTS 748
Query: 1387 IVDFNSHDSDCFIFLLSIRAAGRGLNLQSADTVIIYDPDPNPKNEEQAVARAHRIGQKRE 1446
I FN+ +S F+FLLS RA G G+NL +ADTVII+D D NP+ + QA+ARAHRIGQK
Sbjct: 749 IDHFNAPNSPDFVFLLSTRAGGLGINLMTADTVIIFDSDWNPQADLQAMARAHRIGQKNH 808
Query: 1447 VKV 1449
V V
Sbjct: 809 VMV 811
>sp|P40201|CHD1_MOUSE Chromodomain-helicase-DNA-binding protein 1 OS=Mus musculus GN=Chd1
PE=1 SV=3
Length = 1711
Score = 332 bits (850), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 223/621 (35%), Positives = 335/621 (53%), Gaps = 92/621 (14%)
Query: 863 KRMEALKNNDVERYREMLLEQQTSIPGDAAERYAVLSSFLTQTEEYLYKLGSKITAAKNQ 922
K+++ K D E R + + + P D Y LT Y++ +I A NQ
Sbjct: 345 KKLDNYKKKDQETKRWL----KNASPEDVE--YYNCQQELTDDLHKQYQIVERIIAHSNQ 398
Query: 923 QEVEEAANAAAAAARLQGLSEEEVRSAAACAGEE-VMIRNRF---LEMNAPRDGSSVNKY 978
+ AA + QGL E C+ E+ +I +F ++ R+ S +
Sbjct: 399 KS---AAGLPDYYCKWQGLPYSE------CSWEDGALISKKFQTCIDEYFSRNQSKTTPF 449
Query: 979 YSLAHAVNER-----VMRQPSML---RAGTLRDYQIVGLQWMLSLYNNKLNGILADEMGL 1030
+ +R + +QPS + LRDYQ+ GL W+ + + ILADEMGL
Sbjct: 450 KDCK-VLKQRPRFVALKKQPSYIGGHEGLELRDYQLNGLNWLAHSWCKGNSCILADEMGL 508
Query: 1031 GKTVQVMALIAYLMEFKGNYGPHLIIVPNAVLVNWKSELHKWLPSVSCIYYVGAKDQRSR 1090
GKT+Q ++ + YL YGP L++VP + L +W+ E+ W ++ + Y+G + R+
Sbjct: 509 GKTIQTISFLNYLFHEHQLYGPFLLVVPLSTLTSWQREIQTWASQMNAVVYLGDINSRNM 568
Query: 1091 LFSQE-----VAALKFNVLVTTYEFIMYDRSKLSKVDWKYIIIDEAQRMKDRESVLARDL 1145
+ + E LKFN+L+TTYE ++ D++ L ++W +I +DEA R+K+ +S+L + L
Sbjct: 569 IRTHEWMHPQTKRLKFNILLTTYEILLKDKAFLGGLNWAFIGVDEAHRLKNDDSLLYKTL 628
Query: 1146 DRYRCQRRLLLTGTPLQNDLKELWSLLNLLLPEVFDNRKAFHDWFSQPFQKEGPTHNADD 1205
++ RLL+TGTPLQN LKELWSLL+ ++PE F + W + F++E H
Sbjct: 629 IDFKSNHRLLITGTPLQNSLKELWSLLHFIMPEKFSS------W--EDFEEE---HGKGR 677
Query: 1206 DWLETEKKVIIIHRLHQILEPFMLRRRVEDVEGSLPPKVSIVLRCRMSAIQSAIYDWIKA 1265
++ LH+ LEPF+LRR +DVE SLP KV +LR MSA+Q Y WI
Sbjct: 678 EYGYAS--------LHKELEPFLLRRVKKDVEKSLPAKVEQILRMEMSALQKQYYKWI-- 727
Query: 1266 TGTLRVDPEDEKRRVQKNPIYQAKVYKTLN-----------NRCMELRKTCNHPLLNYP- 1313
+ +N YK L+ N MEL+K CNH L P
Sbjct: 728 --------------LTRN-------YKALSKGSKGSTSGFLNIMMELKKCCNHCYLIKPP 766
Query: 1314 -----YFSDLSKDFLVKSCGKLWILDRILIKLQRTGHRVLLFSTMTKLLDILEEYLQWRQ 1368
Y + L++S GKL +LD++LI+L+ G+RVL+FS M ++LDIL EYL++RQ
Sbjct: 767 DNNEFYNKQEALQHLIRSSGKLILLDKLLIRLRERGNRVLIFSQMVRMLDILAEYLKYRQ 826
Query: 1369 LVYRRIDGTTSLEDRESAIVDFNSHDSDCFIFLLSIRAAGRGLNLQSADTVIIYDPDPNP 1428
++R+DG+ E R+ A+ FN+ S+ F FLLS RA G G+NL SADTV+I+D D NP
Sbjct: 827 FPFQRLDGSIKGELRKQALDHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNP 886
Query: 1429 KNEEQAVARAHRIGQKREVKV 1449
+N+ QA ARAHRIGQK++V +
Sbjct: 887 QNDLQAQARAHRIGQKKQVNI 907
>sp|O14646|CHD1_HUMAN Chromodomain-helicase-DNA-binding protein 1 OS=Homo sapiens GN=CHD1
PE=1 SV=2
Length = 1710
Score = 331 bits (848), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 223/621 (35%), Positives = 335/621 (53%), Gaps = 92/621 (14%)
Query: 863 KRMEALKNNDVERYREMLLEQQTSIPGDAAERYAVLSSFLTQTEEYLYKLGSKITAAKNQ 922
K+++ K D E R + + + P D Y LT Y++ +I A NQ
Sbjct: 347 KKLDNYKKKDQETKRWL----KNASPEDV--EYYNCQQELTDDLHKQYQIVERIIAHSNQ 400
Query: 923 QEVEEAANAAAAAARLQGLSEEEVRSAAACAGEE-VMIRNRF---LEMNAPRDGSSVNKY 978
+ AA + QGL E C+ E+ +I +F ++ R+ S +
Sbjct: 401 KS---AAGYPDYYCKWQGLPYSE------CSWEDGALISKKFQACIDEYFSRNQSKTTPF 451
Query: 979 YSLAHAVNER-----VMRQPSML---RAGTLRDYQIVGLQWMLSLYNNKLNGILADEMGL 1030
+ +R + +QPS + LRDYQ+ GL W+ + + ILADEMGL
Sbjct: 452 KDCK-VLKQRPRFVALKKQPSYIGGHEGLELRDYQLNGLNWLAHSWCKGNSCILADEMGL 510
Query: 1031 GKTVQVMALIAYLMEFKGNYGPHLIIVPNAVLVNWKSELHKWLPSVSCIYYVGAKDQRSR 1090
GKT+Q ++ + YL YGP L++VP + L +W+ E+ W ++ + Y+G + R+
Sbjct: 511 GKTIQTISFLNYLFHEHQLYGPFLLVVPLSTLTSWQREIQTWASQMNAVVYLGDINSRNM 570
Query: 1091 LFSQE-----VAALKFNVLVTTYEFIMYDRSKLSKVDWKYIIIDEAQRMKDRESVLARDL 1145
+ + E LKFN+L+TTYE ++ D++ L ++W +I +DEA R+K+ +S+L + L
Sbjct: 571 IRTHEWTHHQTKRLKFNILLTTYEILLKDKAFLGGLNWAFIGVDEAHRLKNDDSLLYKTL 630
Query: 1146 DRYRCQRRLLLTGTPLQNDLKELWSLLNLLLPEVFDNRKAFHDWFSQPFQKEGPTHNADD 1205
++ RLL+TGTPLQN LKELWSLL+ ++PE F + W + F++E H
Sbjct: 631 IDFKSNHRLLITGTPLQNSLKELWSLLHFIMPEKFSS------W--EDFEEE---HGKGR 679
Query: 1206 DWLETEKKVIIIHRLHQILEPFMLRRRVEDVEGSLPPKVSIVLRCRMSAIQSAIYDWIKA 1265
++ LH+ LEPF+LRR +DVE SLP KV +LR MSA+Q Y WI
Sbjct: 680 EYGYAS--------LHKELEPFLLRRVKKDVEKSLPAKVEQILRMEMSALQKQYYKWI-- 729
Query: 1266 TGTLRVDPEDEKRRVQKNPIYQAKVYKTLN-----------NRCMELRKTCNHPLLNYP- 1313
+ +N YK L+ N MEL+K CNH L P
Sbjct: 730 --------------LTRN-------YKALSKGSKGSTSGFLNIMMELKKCCNHCYLIKPP 768
Query: 1314 -----YFSDLSKDFLVKSCGKLWILDRILIKLQRTGHRVLLFSTMTKLLDILEEYLQWRQ 1368
Y + L++S GKL +LD++LI+L+ G+RVL+FS M ++LDIL EYL++RQ
Sbjct: 769 DNNEFYNKQEALQHLIRSSGKLILLDKLLIRLRERGNRVLIFSQMVRMLDILAEYLKYRQ 828
Query: 1369 LVYRRIDGTTSLEDRESAIVDFNSHDSDCFIFLLSIRAAGRGLNLQSADTVIIYDPDPNP 1428
++R+DG+ E R+ A+ FN+ S+ F FLLS RA G G+NL SADTV+I+D D NP
Sbjct: 829 FPFQRLDGSIKGELRKQALDHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNP 888
Query: 1429 KNEEQAVARAHRIGQKREVKV 1449
+N+ QA ARAHRIGQK++V +
Sbjct: 889 QNDLQAQARAHRIGQKKQVNI 909
>sp|A9X4T1|CHD1_BOMMO Chromodomain-helicase-DNA-binding protein 1 OS=Bombyx mori GN=CHD1
PE=1 SV=1
Length = 1365
Score = 328 bits (840), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 188/468 (40%), Positives = 271/468 (57%), Gaps = 56/468 (11%)
Query: 1001 LRDYQIVGLQWMLSLYNNKLNGILADEMGLGKTVQVMALIAYLMEFKGNYGPHLIIVPNA 1060
LRDYQ+ GL W++ + + ILADEMGLGKT+Q + + YL + + YGP L +VP +
Sbjct: 205 LRDYQMDGLNWLIHSWCKDNSVILADEMGLGKTIQTICFLYYLFKSQHLYGPFLCVVPLS 264
Query: 1061 VLVNWKSELHKWLPSVSCIYYVGAKDQRS--RLFSQEVAA---LKFNVLVTTYEFIMYDR 1115
+ W+ E +W P ++ + Y+G R R F ++ LKFN ++TTYE ++ DR
Sbjct: 265 TMTAWQREFQQWAPDINVVTYIGDVSSRDIIRQFEWSFSSSKRLKFNAILTTYEILLKDR 324
Query: 1116 SKLSKVDWKYIIIDEAQRMKDRESVLARDLDRYRCQRRLLLTGTPLQNDLKELWSLLNLL 1175
L W +++DEA R+K+ +S+L + L + RLL+TGTPLQN LKELW+LL+ +
Sbjct: 325 QFLRSFSWACLLVDEAHRLKNDDSLLYKALKEFDTNHRLLVTGTPLQNSLKELWALLHFI 384
Query: 1176 LPEVFDNRKAFHDWFSQPFQKEGPTHNADDDWLETEKKVIIIHRLHQILEPFMLRRRVED 1235
+P F++ + F + ++ T + +LH+ LEPF+LRR+ +D
Sbjct: 385 MPYKFESWEDF-----EKDHEDAATKGYE--------------KLHKQLEPFILRRQKKD 425
Query: 1236 VEGSLPPKVSIVLRCRMSAIQSAIYDWIKATGTLRVDPEDEKRRVQKNPIYQAKVYKTLN 1295
VE SLP KV +LR M++IQ Y WI + R+ K I T
Sbjct: 426 VEKSLPAKVEQILRVEMTSIQKQYYKWILTKNYSAL------RKGVKGSI------NTFI 473
Query: 1296 NRCMELRKTCNHPLLNYPYFSDLSKDF--------------LVKSCGKLWILDRILIKLQ 1341
N +EL+K CNH LL P +DF L++ GKL +LD++L +L+
Sbjct: 474 NIVIELKKCCNHALLTKP------EDFESRASLATSDAVEKLLRGSGKLLLLDKLLCRLK 527
Query: 1342 RTGHRVLLFSTMTKLLDILEEYLQWRQLVYRRIDGTTSLEDRESAIVDFNSHDSDCFIFL 1401
TGHRVL+FS M ++LDIL EYLQ R ++R+DG+ E R+ A+ FN+ S F FL
Sbjct: 528 ETGHRVLIFSQMVRMLDILAEYLQRRHFPFQRLDGSIKGELRKQALDHFNAEGSQDFCFL 587
Query: 1402 LSIRAAGRGLNLQSADTVIIYDPDPNPKNEEQAVARAHRIGQKREVKV 1449
LS RA G G+NL +ADTVII+D D NP+N+ QA ARAHRIGQK +V +
Sbjct: 588 LSTRAGGLGINLATADTVIIFDSDWNPQNDLQAQARAHRIGQKNQVNI 635
>sp|O97159|CHDM_DROME Chromodomain-helicase-DNA-binding protein Mi-2 homolog OS=Drosophila
melanogaster GN=Mi-2 PE=1 SV=2
Length = 1982
Score = 323 bits (828), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 191/495 (38%), Positives = 272/495 (54%), Gaps = 74/495 (14%)
Query: 992 QPSMLRAGT---LRDYQIVGLQWMLSLYNNKLNGILADEMGLGKTVQVMALIAYLMEFKG 1048
QP+ L GT L YQI G+ W+ + ++ ILADEMGLGKT+Q + + L +
Sbjct: 719 QPAFLE-GTGMQLHPYQIEGINWLRYSWGQGIDTILADEMGLGKTIQTVTFLYSLYKEGH 777
Query: 1049 NYGPHLIIVPNAVLVNWKSELHKWLPSVSCIYYVGAKDQRSRLFSQEVAA---------- 1098
GP L+ VP + LVNW+ E W P CI Y+G KD R+ + E++
Sbjct: 778 CRGPFLVAVPLSTLVNWEREFELWAPDFYCITYIGDKDSRAVIRENELSFEEGAIRGSKV 837
Query: 1099 -------LKFNVLVTTYEFIMYDRSKLSKVDWKYIIIDEAQRMKDRESVLARDLDRYRCQ 1151
KFNVL+T+YE I D + L +DW +++DEA R+K +S R L+ Y
Sbjct: 838 SRLRTTQYKFNVLLTSYELISMDAACLGSIDWAVLVVDEAHRLKSNQSKFFRILNSYTIA 897
Query: 1152 RRLLLTGTPLQNDLKELWSLLNLLLPEVFDNRKAFHDWFSQPFQKEGPTHNADDDWLETE 1211
+LLLTGTPLQN+L+EL+ LLN L + F++ +AF F+ ++E
Sbjct: 898 YKLLLTGTPLQNNLEELFHLLNFLSRDKFNDLQAFQGEFADVSKEEQ------------- 944
Query: 1212 KKVIIIHRLHQILEPFMLRRRVEDVEGSLPPKVSIVLRCRMSAIQSAIYDWIKATGTLRV 1271
+ RLH++L P MLRR DV ++P K ++R +SA+Q Y +I
Sbjct: 945 -----VKRLHEMLGPHMLRRLKTDVLKNMPSKSEFIVRVELSAMQKKFYKFI-------- 991
Query: 1272 DPEDEKRRVQKNPIYQAKVYKTLNNRC------MELRKTCNHPLLNYPYFSDLSK----- 1320
+ KN Y+A K+ C M+L+K CNHP L +P ++ +
Sbjct: 992 --------LTKN--YEALNSKSGGGSCSLINIMMDLKKCCNHPYL-FPSAAEEATTAAGG 1040
Query: 1321 ----DFLVKSCGKLWILDRILIKLQRTGHRVLLFSTMTKLLDILEEYLQWRQLVYRRIDG 1376
+ L K+ GKL +L ++L +L+ HRVL+FS MTK+LDILE++L+ Q Y RIDG
Sbjct: 1041 LYEINSLTKAAGKLVLLSKMLKQLKAQNHRVLIFSQMTKMLDILEDFLEGEQYKYERIDG 1100
Query: 1377 TTSLEDRESAIVDFNSHDSDCFIFLLSIRAAGRGLNLQSADTVIIYDPDPNPKNEEQAVA 1436
+ R+ AI FN+ + F+FLLS RA G G+NL +ADTVIIYD D NP N+ QA +
Sbjct: 1101 GITGTLRQEAIDRFNAPGAQQFVFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFS 1160
Query: 1437 RAHRIGQKREVKVIY 1451
RAHRIGQ +V +IY
Sbjct: 1161 RAHRIGQANKV-MIY 1174
>sp|G5EBZ4|LE418_CAEEL Protein let-418 OS=Caenorhabditis elegans GN=let-418 PE=1 SV=1
Length = 1829
Score = 322 bits (824), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 186/501 (37%), Positives = 276/501 (55%), Gaps = 60/501 (11%)
Query: 998 AGTLRDYQIVGLQWMLSLYNNKLNGILADEMGLGKTVQVMALIAYLMEFKGNYGPHLIIV 1057
G L YQ+ GL W+ ++N + ILADEMGLGKTVQ + + LM+ GP LI
Sbjct: 599 GGKLHPYQLEGLNWLRHCWSNGTDAILADEMGLGKTVQSLTFLYSLMKEGHCKGPFLIAA 658
Query: 1058 PNAVLVNWKSELHKWLPSVSCIYYVGAKDQRSRLFSQEVAA------------------- 1098
P + ++NW+ E +W P + YVG +D R L E +
Sbjct: 659 PLSTIINWEREAEQWCPDFYVVTYVGLRDARVVLREHEFSFVEGAVRSGPKASKMKTTEN 718
Query: 1099 LKFNVLVTTYEFIMYDRSKLSKVDWKYIIIDEAQRMKDRESVLARDLDRYRCQRRLLLTG 1158
+KF+VL+T+YE I D++ LS ++W +++DEA R+K+ +S+ ++L+ Y R+LLTG
Sbjct: 719 MKFHVLLTSYETINMDKTILSSIEWGALVVDEAHRLKNNQSLFFKNLNEYTIHYRVLLTG 778
Query: 1159 TPLQNDLKELWSLLNLLLPEVFDNRKAFHDWFSQPFQKEGPTHNADDDWLETEKKVIIIH 1218
TPLQN+L+EL+ LLN L E F+ +AF F++ +++ I
Sbjct: 779 TPLQNNLEELFHLLNFLSKERFNQLEAFTAEFNEISKEDQ------------------IE 820
Query: 1219 RLHQILEPFMLRRRVEDVEGSLPPKVSIVLRCRMSAIQSAIYDWIKATGTLRVDPEDEKR 1278
+LH +L P MLRR DV +P K +++R +SA+Q W K T D + K
Sbjct: 821 KLHNLLGPHMLRRLKADVLTGMPSKSELIVRVELSAMQKK---WYKNILTRNFDALNVK- 876
Query: 1279 RVQKNPIYQAKVYKTLNNRCMELRKTCNHPLLNYPYFSDLSKD--------FLVKSCGKL 1330
+L N MEL+K CNHP L + K+ L+K+ GK
Sbjct: 877 --------NGGTQMSLMNVLMELKKCCNHPYLFVKAELEAPKEKNGMYEGTALIKNSGKF 928
Query: 1331 WILDRILIKLQRTGHRVLLFSTMTKLLDILEEYLQWRQLVYRRIDGTTSLEDRESAIVDF 1390
+L ++L KL+ GHRVL+FS MT++LDI+E+ ++ Y RIDG+ + R+ AI +
Sbjct: 929 VLLQKMLRKLKDGGHRVLIFSQMTRMLDIMEDLCEYEGYRYERIDGSIMGQMRQDAIDRY 988
Query: 1391 NSHDSDCFIFLLSIRAAGRGLNLQSADTVIIYDPDPNPKNEEQAVARAHRIGQKREV--- 1447
N+ + FIFLLS RA G G+NL +ADTVIIYD D NP N+ QA +RAHR+GQK +V
Sbjct: 989 NAPGAQQFIFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRLGQKHKVMIY 1048
Query: 1448 KVIYMEAVVDKISSHQKEDEL 1468
+ + ++V +KI+S K+ L
Sbjct: 1049 RFVTKKSVEEKITSVAKKKML 1069
>sp|Q7ZU90|CHD1L_DANRE Chromodomain-helicase-DNA-binding protein 1-like OS=Danio rerio
GN=chd1l PE=2 SV=1
Length = 1026
Score = 320 bits (821), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 199/525 (37%), Positives = 290/525 (55%), Gaps = 58/525 (11%)
Query: 996 LRAGTLRDYQIVGLQWMLSLYNNKLNGILADEMGLGKTVQVMALIAYLMEFKGNYGPHLI 1055
L A LR YQ+ G++W+ N+ IL DEMGLGKT Q ++L+AY GP L+
Sbjct: 30 LGAIHLRPYQLDGVKWLSLCMKNQQGCILGDEMGLGKTCQTISLLAYARGSLKMNGPFLV 89
Query: 1056 IVPNAVLVNWKSELHKWLPSVSCIYYVGAKDQRSRLFSQEVAALKFNVLVTTYEFIMYDR 1115
+ P AVL NW+ EL ++ PS+S I Y G K++R+ L + +F+VL+TTYE + D
Sbjct: 90 LCPLAVLENWRQELERFCPSLSVICYTGDKEKRAELQQNLKSDPRFHVLLTTYEMCLKDA 149
Query: 1116 SKLSKVDWKYIIIDEAQRMKDRESVLARDLDRYRCQRRLLLTGTPLQNDLKELWSLLNLL 1175
L WK +++DEA R+K++ES+L + L + R+LLTGTP+QN+L+E++SLL +
Sbjct: 150 RYLKSWKWKILVVDEAHRLKNQESLLHQTLKEFTVGFRVLLTGTPIQNNLQEVYSLLTFI 209
Query: 1176 LPEVF------DNRKAFHDWFSQPFQKEGPTHNADDDWLETEKKVIIIHRLHQILEPFML 1229
P VF D A+ D ++P ++ LHQ+L+PF+L
Sbjct: 210 QPSVFLPEAVEDFVNAYADIQTEP---------------------ALVDELHQVLQPFLL 248
Query: 1230 RRRVEDVEGSLPPKVSIVLRCRMSAIQSAIYDWI--KATGTLRVDPEDEKRRVQKNPIYQ 1287
RR +V LP K +V+ +SA+Q Y I + R D + R
Sbjct: 249 RRVKAEVAAELPKKTELVVFHGLSALQKRYYKAILMRDLDAFRTDQSTKTR--------- 299
Query: 1288 AKVYKTLNNRCMELRKTCNHPLLNYPYFSDLS------KDFLVKSCGKLWILDRILIKLQ 1341
L N M+LRK +HP L F + + LV++ GKL +LD +L LQ
Sbjct: 300 ------LLNVLMQLRKCVDHPYL----FDGVEPEPFEMGEHLVEASGKLSLLDSMLAYLQ 349
Query: 1342 RTGHRVLLFSTMTKLLDILEEYLQWRQLVYRRIDGTTSLEDRESAIVDFNSHDSDCFIFL 1401
GH VLLFS MT++LDIL++YL++R Y R+DG+ E+R AI +F++ D FIFL
Sbjct: 350 EGGHHVLLFSQMTRMLDILQDYLEYRGYSYERLDGSVRGEERNLAIKNFST--KDVFIFL 407
Query: 1402 LSIRAAGRGLNLQSADTVIIYDPDPNPKNEEQAVARAHRIGQKREVKVIYMEA--VVDKI 1459
LS +A G G+NL +ADTVI D D NP+N+ QA ARAHRIGQ R VKVI + +++I
Sbjct: 408 LSTKAGGVGMNLTAADTVIFVDGDFNPQNDLQAAARAHRIGQTRPVKVIRLLGRDTIEEI 467
Query: 1460 SSHQKEDELRSGGTVDLEDDLAGKDRYIGSIEGLIRNNIQQYKID 1504
+ +LR TV E + D+ + GL + I ++ +D
Sbjct: 468 IYSRAVSKLRLTDTVIEEGRFSLLDQAQSAASGLQLSEILKFGVD 512
>sp|Q8TDI0|CHD5_HUMAN Chromodomain-helicase-DNA-binding protein 5 OS=Homo sapiens GN=CHD5
PE=2 SV=1
Length = 1954
Score = 320 bits (821), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 184/479 (38%), Positives = 268/479 (55%), Gaps = 57/479 (11%)
Query: 998 AGTLRDYQIVGLQWMLSLYNNKLNGILADEMGLGKTVQVMALIAYLMEFKGNYGPHLIIV 1057
GTL YQ+ GL W+ + + ILADEMGLGKTVQ + + L + + GP+L+
Sbjct: 697 GGTLHPYQLEGLNWLRFSWAQGTDTILADEMGLGKTVQTIVFLYSLYKEGHSKGPYLVSA 756
Query: 1058 PNAVLVNWKSELHKWLPSVSCIYYVGAKDQRSRL----FSQEVAAL-------------- 1099
P + ++NW+ E W P + Y G K+ RS + FS E A+
Sbjct: 757 PLSTIINWEREFEMWAPDFYVVTYTGDKESRSVIRENEFSFEDNAIRSGKKVFRMKKEVQ 816
Query: 1100 -KFNVLVTTYEFIMYDRSKLSKVDWKYIIIDEAQRMKDRESVLARDLDRYRCQRRLLLTG 1158
KF+VL+T+YE I D++ L ++W +++DEA R+K+ +S R L+ Y+ +LLLTG
Sbjct: 817 IKFHVLLTSYELITIDQAILGSIEWACLVVDEAHRLKNNQSKFFRVLNSYKIDYKLLLTG 876
Query: 1159 TPLQNDLKELWSLLNLLLPEVFDNRKAFHDWFSQPFQKEGPTHNADDDWLETEKKVIIIH 1218
TPLQN+L+EL+ LLN L PE F+N + F + F+ +++ I
Sbjct: 877 TPLQNNLEELFHLLNFLTPERFNNLEGFLEEFADISKEDQ------------------IK 918
Query: 1219 RLHQILEPFMLRRRVEDVEGSLPPKVSIVLRCRMSAIQSAIYDWIKATGTLRVDPEDEKR 1278
+LH +L P MLRR DV ++P K +++R +S +Q Y +I ++ +
Sbjct: 919 KLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSQMQKKYYKFILTRNFEALNSKGGGN 978
Query: 1279 RVQKNPIYQAKVYKTLNNRCMELRKTCNHPLL------NYPYFSDLSKD--FLVKSCGKL 1330
+V +L N M+L+K CNHP L P + S D LVKS GKL
Sbjct: 979 QV------------SLLNIMMDLKKCCNHPYLFPVAAVEAPVLPNGSYDGSSLVKSSGKL 1026
Query: 1331 WILDRILIKLQRTGHRVLLFSTMTKLLDILEEYLQWRQLVYRRIDGTTSLEDRESAIVDF 1390
+L ++L KL+ GHRVL+FS MTK+LD+LE++L++ Y RIDG + R+ AI F
Sbjct: 1027 MLLQKMLKKLRDEGHRVLIFSQMTKMLDLLEDFLEYEGYKYERIDGGITGGLRQEAIDRF 1086
Query: 1391 NSHDSDCFIFLLSIRAAGRGLNLQSADTVIIYDPDPNPKNEEQAVARAHRIGQKREVKV 1449
N+ + F FLLS RA G G+NL +ADTVIIYD D NP N+ QA +RAHRIGQ ++V +
Sbjct: 1087 NAPGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMI 1145
>sp|Q12873|CHD3_HUMAN Chromodomain-helicase-DNA-binding protein 3 OS=Homo sapiens GN=CHD3
PE=1 SV=3
Length = 2000
Score = 319 bits (818), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 187/490 (38%), Positives = 268/490 (54%), Gaps = 62/490 (12%)
Query: 992 QPSMLRA--GTLRDYQIVGLQWMLSLYNNKLNGILADEMGLGKTVQVMALIAYLMEFKGN 1049
QP + A GTL YQ+ GL W+ + + ILADEMGLGKT+Q + + L +
Sbjct: 725 QPRFITATGGTLHMYQLEGLNWLRFSWAQGTDTILADEMGLGKTIQTIVFLYSLYKEGHT 784
Query: 1050 YGPHLIIVPNAVLVNWKSELHKWLPSVSCIYYVGAKDQRSRLFSQEV------------- 1096
GP L+ P + ++NW+ E W P + Y G KD R+ + E
Sbjct: 785 KGPFLVSAPLSTIINWEREFQMWAPKFYVVTYTGDKDSRAIIRENEFSFEDNAIKGGKKA 844
Query: 1097 ------AALKFNVLVTTYEFIMYDRSKLSKVDWKYIIIDEAQRMKDRESVLARDLDRYRC 1150
A +KF+VL+T+YE I D++ L + W +++DEA R+K+ +S R L+ Y+
Sbjct: 845 FKMKREAQVKFHVLLTSYELITIDQAALGSIRWACLVVDEAHRLKNNQSKFFRVLNGYKI 904
Query: 1151 QRRLLLTGTPLQNDLKELWSLLNLLLPEVFDNRKAFHDWFSQPFQKEGPTHNADDDWLET 1210
+LLLTGTPLQN+L+EL+ LLN L PE F+N + F + F+ +
Sbjct: 905 DHKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEEFAD---------------ISK 949
Query: 1211 EKKVIIIHRLHQILEPFMLRRRVEDVEGSLPPKVSIVLRCRMSAIQSAIYDWIKATGTLR 1270
E + I +LH +L P MLRR DV ++P K +++R +S +Q Y +I L
Sbjct: 950 EDQ---IKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSPMQKKYYKYI-----LT 1001
Query: 1271 VDPEDEKRRVQKNPIYQAKVYKTLNNRCMELRKTCNHPLLNYPYFSDLSKDF-------- 1322
+ E R N + +L N M+L+K CNHP L +P + S
Sbjct: 1002 RNFEALNSRGGGNQV-------SLLNIMMDLKKCCNHPYL-FPVAAMESPKLPSGAYEGG 1053
Query: 1323 -LVKSCGKLWILDRILIKLQRTGHRVLLFSTMTKLLDILEEYLQWRQLVYRRIDGTTSLE 1381
L+KS GKL +L ++L KL+ GHRVL+FS MTK+LD+LE++L + Y RIDG +
Sbjct: 1054 ALIKSSGKLMLLQKMLRKLKEQGHRVLIFSQMTKMLDLLEDFLDYEGYKYERIDGGITGA 1113
Query: 1382 DRESAIVDFNSHDSDCFIFLLSIRAAGRGLNLQSADTVIIYDPDPNPKNEEQAVARAHRI 1441
R+ AI FN+ + F FLLS RA G G+NL +ADTVII+D D NP N+ QA +RAHRI
Sbjct: 1114 LRQEAIDRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIFDSDWNPHNDIQAFSRAHRI 1173
Query: 1442 GQKREVKVIY 1451
GQ +V +IY
Sbjct: 1174 GQANKV-MIY 1182
>sp|Q9CXF7|CHD1L_MOUSE Chromodomain-helicase-DNA-binding protein 1-like OS=Mus musculus
GN=Chd1l PE=2 SV=1
Length = 900
Score = 319 bits (818), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 184/458 (40%), Positives = 262/458 (57%), Gaps = 40/458 (8%)
Query: 1001 LRDYQIVGLQWMLSLYNNKLNGILADEMGLGKTVQVMALIAYLMEFKGNYGPHLIIVPNA 1060
LR YQ+ G+ W++ ++ + IL DEMGLGKT Q +AL+ YL+ + GP L++ P +
Sbjct: 40 LRSYQLEGVNWLVQCFHCQNGCILGDEMGLGKTCQTIALLIYLVGRLNDEGPFLVLCPLS 99
Query: 1061 VLVNWKSELHKWLPSVSCIYYVGAKDQRSRLFSQEVAALKFNVLVTTYEFIMYDRSKLSK 1120
VL NWK E+ ++ P +SC+ Y G K++R+RL F+VL+TTYE + D S L
Sbjct: 100 VLSNWKEEMERFAPGLSCVTYTGDKEERARLQQDLRQESGFHVLLTTYEICLKDASFLKS 159
Query: 1121 VDWKYIIIDEAQRMKDRESVLARDLDRYRCQRRLLLTGTPLQNDLKELWSLLNLLLPEVF 1180
W + +DEA R+K++ S+L R L + RLLLTGTP+QN L+EL+SLL ++ P++F
Sbjct: 160 FSWSVLAVDEAHRLKNQSSLLHRTLSEFSAVFRLLLTGTPIQNSLRELYSLLCVVEPDLF 219
Query: 1181 DNRKAFHDWFSQPFQKEGPTHNADDDWLETEKKVIIIHRLHQILEPFMLRRRVEDVEGSL 1240
R+ D F Q +Q + EK+ LH++L+PF+LRR V L
Sbjct: 220 -CREQVED-FVQRYQ-------------DIEKESKSASELHRLLQPFLLRRVKAQVATEL 264
Query: 1241 PPKVSIVLRCRMSAIQSAIYDWIKATGTLRVDPEDEKRRVQKNPIYQAKVYKTLNNRCME 1300
P K +V+ MSA+Q Y I + E K+ L N +
Sbjct: 265 PKKTEVVVYHGMSALQKKYYKAILMKDLDAFENETAKK-------------VKLQNILTQ 311
Query: 1301 LRKTCNHPLLNYPYFSDLS------KDFLVKSCGKLWILDRILIKLQRTGHRVLLFSTMT 1354
LRK +HP L F + + L+++ GKL +LDR+L L GHRVLLFS MT
Sbjct: 312 LRKCVDHPYL----FDGVEPEPFEVGEHLIEASGKLHLLDRLLAFLYSGGHRVLLFSQMT 367
Query: 1355 KLLDILEEYLQWRQLVYRRIDGTTSLEDRESAIVDFNSHDSDCFIFLLSIRAAGRGLNLQ 1414
+LDIL++Y+ +R Y R+DG+ E+R AI +F + F+FLLS RA G G+NL
Sbjct: 368 HMLDILQDYMDYRGYSYERVDGSVRGEERHLAIKNFG--NQPIFVFLLSTRAGGVGMNLT 425
Query: 1415 SADTVIIYDPDPNPKNEEQAVARAHRIGQKREVKVIYM 1452
+ADTVI D D NP+N+ QA ARAHRIGQ + VKVI +
Sbjct: 426 AADTVIFVDSDFNPQNDLQAAARAHRIGQNKSVKVIRL 463
>sp|Q9HCK8|CHD8_HUMAN Chromodomain-helicase-DNA-binding protein 8 OS=Homo sapiens GN=CHD8
PE=1 SV=5
Length = 2581
Score = 319 bits (818), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 202/554 (36%), Positives = 298/554 (53%), Gaps = 91/554 (16%)
Query: 1001 LRDYQIVGLQWMLSLYNNKLNGILADEMGLGKTVQVMALIAYLMEFKGNYGPHLIIVPNA 1060
LR+YQ+ G+ W+L + N+ N ILADEMGLGKT+Q +A + + G +GP L+I P +
Sbjct: 811 LREYQLEGVNWLLFNWYNRQNCILADEMGLGKTIQSIAFLQEVYNV-GIHGPFLVIAPLS 869
Query: 1061 VLVNWKSELHKWLPSVSCIYY-------------VGAKDQRSRLFSQEVAALKFNVLVTT 1107
+ NW+ E + W + +Y+ + KD R RL A KF+ L+TT
Sbjct: 870 TITNWEREFNTWTEMNTIVYHGSLASRQMIQQYEMYCKDSRGRLIP---GAYKFDALITT 926
Query: 1108 YEFIMYDRSKLSKVDWKYIIIDEAQRMKDRESVLARDLDRYRCQRRLLLTGTPLQNDLKE 1167
+E I+ D +L +++W+ +IIDEA R+K+R L L + ++LLTGTPLQN ++E
Sbjct: 927 FEMILSDCPELREIEWRCVIIDEAHRLKNRNCKLLDSLKHMDLEHKVLLTGTPLQNTVEE 986
Query: 1168 LWSLLNLLLPEVFDNRKAFHDWFSQPFQKEGPTHNADDDWLETEKKVIIIHRLHQILEPF 1227
L+SLL+ L P F + F F L+TE++V +L IL+P
Sbjct: 987 LFSLLHFLEPSQFPSESEFLKDFGD---------------LKTEEQV---QKLQAILKPM 1028
Query: 1228 MLRRRVEDVEGSLPPKVSIVLRCRMSAIQSAIYDWIKATGTLRVDPEDEKRRVQKNPIYQ 1287
MLRR EDVE +L PK ++ ++ IQ Y I ++KN +
Sbjct: 1029 MLRRLKEDVEKNLAPKQETIIEVELTNIQKKYYRAI----------------LEKNFSFL 1072
Query: 1288 AKVYKTLN-----NRCMELRKTCNHP-LLNYPYFSDLSK----------DF----LVKSC 1327
+K N N MELRK CNHP L+N L++ DF +V+S
Sbjct: 1073 SKGAGHTNMPNLLNTMMELRKCCNHPYLINGAEEKILTEFREACHIIPHDFHLQAMVRSA 1132
Query: 1328 GKLWILDRILIKLQRTGHRVLLFSTMTKLLDILEEYLQWRQLVYRRIDGTTSLEDRESAI 1387
GKL ++D++L KL+ GH+VL+FS M + LDILE+YL R+ +Y RIDG R++AI
Sbjct: 1133 GKLVLIDKLLPKLKAGGHKVLIFSQMVRCLDILEDYLIQRRYLYERIDGRVRGNLRQAAI 1192
Query: 1388 VDFNSHDSDCFIFLLSIRAAGRGLNLQSADTVIIYDPDPNPKNEEQAVARAHRIGQKREV 1447
F+ DSD F+FLL RA G G+NL +ADT II+D D NP+N+ QA AR HRIGQ + V
Sbjct: 1193 DRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAV 1252
Query: 1448 KVIYMEAVVDKISSHQKEDELRSGGTVDLEDD------LAGKDRYIGSIEGLIRNNIQQY 1501
KV + I+ + E E+ ++ L D ++G+D G+I G IQQ+
Sbjct: 1253 KVYRL------ITRNSYEREMFDKASLKLGLDKAVLQSMSGRD---GNITG-----IQQF 1298
Query: 1502 KIDMADEVINAGRF 1515
++++ G +
Sbjct: 1299 SKKEIEDLLRKGAY 1312
>sp|Q09XV5|CHD8_MOUSE Chromodomain-helicase-DNA-binding protein 8 OS=Mus musculus GN=Chd8
PE=1 SV=1
Length = 2582
Score = 319 bits (818), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 202/554 (36%), Positives = 299/554 (53%), Gaps = 91/554 (16%)
Query: 1001 LRDYQIVGLQWMLSLYNNKLNGILADEMGLGKTVQVMALIAYLMEFKGNYGPHLIIVPNA 1060
LR+YQ+ G+ W+L + N+ N ILADEMGLGKT+Q +A + + G +GP L+I P +
Sbjct: 813 LREYQLEGVNWLLFNWYNRQNCILADEMGLGKTIQSIAFLQEVYNV-GIHGPFLVIAPLS 871
Query: 1061 VLVNWKSELHKWLPSVSCIYY-------------VGAKDQRSRLFSQEVAALKFNVLVTT 1107
+ NW+ E + W + +Y+ + KD R RL A KF+ L+TT
Sbjct: 872 TITNWEREFNTWTEMNTIVYHGSLASRQMIQQYEMYCKDSRGRLIP---GAYKFDALITT 928
Query: 1108 YEFIMYDRSKLSKVDWKYIIIDEAQRMKDRESVLARDLDRYRCQRRLLLTGTPLQNDLKE 1167
+E I+ D +L +++W+ +IIDEA R+K+R L L + ++LLTGTPLQN ++E
Sbjct: 929 FEMILSDCPELREIEWRCVIIDEAHRLKNRNCKLLDSLKHMDLEHKVLLTGTPLQNTVEE 988
Query: 1168 LWSLLNLLLPEVFDNRKAFHDWFSQPFQKEGPTHNADDDWLETEKKVIIIHRLHQILEPF 1227
L+SLL+ L P F + F F L+TE++V +L IL+P
Sbjct: 989 LFSLLHFLEPSQFPSESEFLKDFGD---------------LKTEEQV---QKLQAILKPM 1030
Query: 1228 MLRRRVEDVEGSLPPKVSIVLRCRMSAIQSAIYDWIKATGTLRVDPEDEKRRVQKNPIYQ 1287
MLRR EDVE +L PK ++ ++ IQ Y I ++KN +
Sbjct: 1031 MLRRLKEDVEKNLAPKQETIIEVELTNIQKKYYRAI----------------LEKNFSFL 1074
Query: 1288 AKVYKTLN-----NRCMELRKTCNHP-LLN------YPYFSD----LSKDF----LVKSC 1327
+K N N MELRK CNHP L+N F + + +DF +V+S
Sbjct: 1075 SKGAGHTNMPNLLNTMMELRKCCNHPYLINGAEEKILMEFREACHIIPQDFHLQAMVRSA 1134
Query: 1328 GKLWILDRILIKLQRTGHRVLLFSTMTKLLDILEEYLQWRQLVYRRIDGTTSLEDRESAI 1387
GKL ++D++L KL+ GH+VL+FS M + LDILE+YL R+ +Y RIDG R++AI
Sbjct: 1135 GKLVLIDKLLPKLKAGGHKVLIFSQMVRCLDILEDYLIQRRYLYERIDGRVRGNLRQAAI 1194
Query: 1388 VDFNSHDSDCFIFLLSIRAAGRGLNLQSADTVIIYDPDPNPKNEEQAVARAHRIGQKREV 1447
F+ DSD F+FLL RA G G+NL +ADT II+D D NP+N+ QA AR HRIGQ + V
Sbjct: 1195 DRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAV 1254
Query: 1448 KVIYMEAVVDKISSHQKEDELRSGGTVDLEDD------LAGKDRYIGSIEGLIRNNIQQY 1501
KV + I+ + E E+ ++ L D ++G+D G+I G IQQ+
Sbjct: 1255 KVYRL------ITRNSYEREMFDKASLKLGLDKAVLQSMSGRD---GNITG-----IQQF 1300
Query: 1502 KIDMADEVINAGRF 1515
++++ G +
Sbjct: 1301 SKKEIEDLLRKGAY 1314
>sp|Q9JIX5|CHD8_RAT Chromodomain-helicase-DNA-binding protein 8 OS=Rattus norvegicus
GN=Chd8 PE=1 SV=2
Length = 2581
Score = 318 bits (816), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 202/554 (36%), Positives = 299/554 (53%), Gaps = 91/554 (16%)
Query: 1001 LRDYQIVGLQWMLSLYNNKLNGILADEMGLGKTVQVMALIAYLMEFKGNYGPHLIIVPNA 1060
LR+YQ+ G+ W+L + N+ N ILADEMGLGKT+Q +A + + G +GP L+I P +
Sbjct: 811 LREYQLEGVNWLLFNWYNRQNCILADEMGLGKTIQSIAFLQEVYNV-GIHGPFLVIAPLS 869
Query: 1061 VLVNWKSELHKWLPSVSCIYY-------------VGAKDQRSRLFSQEVAALKFNVLVTT 1107
+ NW+ E + W + +Y+ + KD R RL A KF+ L+TT
Sbjct: 870 TITNWEREFNTWTEMNTIVYHGSLASRQMIQQYEMYCKDSRGRLIP---GAYKFDALITT 926
Query: 1108 YEFIMYDRSKLSKVDWKYIIIDEAQRMKDRESVLARDLDRYRCQRRLLLTGTPLQNDLKE 1167
+E I+ D +L +++W+ +IIDEA R+K+R L L + ++LLTGTPLQN ++E
Sbjct: 927 FEMILSDCPELREIEWRCVIIDEAHRLKNRNCKLLDSLKHMDLEHKVLLTGTPLQNTVEE 986
Query: 1168 LWSLLNLLLPEVFDNRKAFHDWFSQPFQKEGPTHNADDDWLETEKKVIIIHRLHQILEPF 1227
L+SLL+ L P F + F F L+TE++V +L IL+P
Sbjct: 987 LFSLLHFLEPSQFPSESEFLKDFGD---------------LKTEEQV---QKLQAILKPM 1028
Query: 1228 MLRRRVEDVEGSLPPKVSIVLRCRMSAIQSAIYDWIKATGTLRVDPEDEKRRVQKNPIYQ 1287
MLRR EDVE +L PK ++ ++ IQ Y I ++KN +
Sbjct: 1029 MLRRLKEDVEKNLAPKQETIIEVELTNIQKKYYRAI----------------LEKNFSFL 1072
Query: 1288 AKVYKTLN-----NRCMELRKTCNHP-LLN------YPYFSD----LSKDF----LVKSC 1327
+K N N MELRK CNHP L+N F + + +DF +V+S
Sbjct: 1073 SKGAGHTNMPNLLNTMMELRKCCNHPYLINGAEEKILMEFREACHIIPQDFHLQAMVRSA 1132
Query: 1328 GKLWILDRILIKLQRTGHRVLLFSTMTKLLDILEEYLQWRQLVYRRIDGTTSLEDRESAI 1387
GKL ++D++L KL+ GH+VL+FS M + LDILE+YL R+ +Y RIDG R++AI
Sbjct: 1133 GKLVLIDKLLPKLKAGGHKVLIFSQMVRCLDILEDYLIQRRYLYERIDGRVRGNLRQAAI 1192
Query: 1388 VDFNSHDSDCFIFLLSIRAAGRGLNLQSADTVIIYDPDPNPKNEEQAVARAHRIGQKREV 1447
F+ DSD F+FLL RA G G+NL +ADT II+D D NP+N+ QA AR HRIGQ + V
Sbjct: 1193 DRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAV 1252
Query: 1448 KVIYMEAVVDKISSHQKEDELRSGGTVDLEDD------LAGKDRYIGSIEGLIRNNIQQY 1501
KV + I+ + E E+ ++ L D ++G+D G+I G IQQ+
Sbjct: 1253 KVYRL------ITRNSYEREMFDKASLKLGLDKAVLQSMSGRD---GNITG-----IQQF 1298
Query: 1502 KIDMADEVINAGRF 1515
++++ G +
Sbjct: 1299 SKKEIEDLLRKGAY 1312
>sp|Q22516|CHD3_CAEEL Chromodomain-helicase-DNA-binding protein 3 homolog OS=Caenorhabditis
elegans GN=chd-3 PE=2 SV=2
Length = 1787
Score = 318 bits (815), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 182/487 (37%), Positives = 264/487 (54%), Gaps = 59/487 (12%)
Query: 992 QPSML--RAGTLRDYQIVGLQWMLSLYNNKLNGILADEMGLGKTVQVMALIAYLMEFKGN 1049
QP + G L YQ+ G+ W+ ++N + ILADEMGLGKTVQ + + LM+
Sbjct: 605 QPDFISETGGNLHPYQLEGINWLRHCWSNGTDAILADEMGLGKTVQSLTFLYTLMKEGHT 664
Query: 1050 YGPHLIIVPNAVLVNWKSELHKWLPSVSCIYYVGAKDQRSRLFSQEVAA----------- 1098
GP LI P + ++NW+ E W P + YVG ++ R + E +
Sbjct: 665 KGPFLIAAPLSTIINWEREAELWCPDFYVVTYVGDRESRMVIREHEFSFVDGAVRGGPKV 724
Query: 1099 --------LKFNVLVTTYEFIMYDRSKLSKVDWKYIIIDEAQRMKDRESVLARDLDRYRC 1150
LKF+VL+T+YE I D++ LS +DW +++DEA R+K+ +S ++L Y
Sbjct: 725 SKIKTLENLKFHVLLTSYECINMDKAILSSIDWAALVVDEAHRLKNNQSTFFKNLREYNI 784
Query: 1151 QRRLLLTGTPLQNDLKELWSLLNLLLPEVFDNRKAFHDWFSQPFQKEGPTHNADDDWLET 1210
Q R+LLTGTPLQN+L+EL+ LLN L P+ F+ ++F FS+ +++
Sbjct: 785 QYRVLLTGTPLQNNLEELFHLLNFLAPDRFNQLESFTAEFSEISKEDQ------------ 832
Query: 1211 EKKVIIIHRLHQILEPFMLRRRVEDVEGSLPPKVSIVLRCRMSAIQSAIYDWIKATGTLR 1270
I +LH +L P MLRR DV +P K +++R +SA+Q Y K T
Sbjct: 833 ------IEKLHNLLGPHMLRRLKADVLTGMPSKQELIVRVELSAMQKKYY---KNILTRN 883
Query: 1271 VDPEDEKRRVQKNPIYQAKVYKTLNNRCMELRKTCNHPLLNYPYFSDLSK--------DF 1322
D + K +L N MEL+K CNHP L + K
Sbjct: 884 FDALNVK---------NGGTQMSLINIIMELKKCCNHPYLFMKACLEAPKLKNGMYEGSA 934
Query: 1323 LVKSCGKLWILDRILIKLQRTGHRVLLFSTMTKLLDILEEYLQWRQLVYRRIDGTTSLED 1382
L+K+ GK +L ++L KL+ GHRVL+FS MT +LDILE++ Y RIDG+ + +
Sbjct: 935 LIKNAGKFVLLQKMLRKLKDGGHRVLIFSQMTMMLDILEDFCDVEGYKYERIDGSITGQQ 994
Query: 1383 RESAIVDFNSHDSDCFIFLLSIRAAGRGLNLQSADTVIIYDPDPNPKNEEQAVARAHRIG 1442
R+ AI +N+ + F+FLLS RA G G+NL +ADTVIIYD D NP N+ QA +RAHR+G
Sbjct: 995 RQDAIDRYNAPGAKQFVFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRLG 1054
Query: 1443 QKREVKV 1449
QK +V +
Sbjct: 1055 QKHKVMI 1061
>sp|O16102|CHD3_DROME Chromodomain-helicase-DNA-binding protein 3 OS=Drosophila
melanogaster GN=Chd3 PE=2 SV=3
Length = 892
Score = 317 bits (813), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 187/490 (38%), Positives = 271/490 (55%), Gaps = 56/490 (11%)
Query: 985 VNERVMRQPSMLRAGTLR--DYQIVGLQWMLSLYNNKLNGILADEMGLGKTVQVMALIAY 1042
+N++ QP L+ L+ +QI G+ W+ + + ILADEMGLGKT+Q + +
Sbjct: 249 LNKKYEDQPVFLKEAGLKLHPFQIEGVSWLRYSWGQGIPTILADEMGLGKTIQTVVFLYS 308
Query: 1043 LMEFKGNYGPHLIIVPNAVLVNWKSELHKWLPSVSCIYYVGAKDQRSRLFSQEVAA---- 1098
L + GP LI VP + L NW+ EL W P + C+ YVG K R+ + E++
Sbjct: 309 LFKEGHCRGPFLISVPLSTLTNWERELELWAPELYCVTYVGGKTARAVIRKHEISFEEVT 368
Query: 1099 ----------LKFNVLVTTYEFIMYDRSKLSKVDWKYIIIDEAQRMKDRESVLARDLDRY 1148
KFNV++T+YEFI D + L +DW +++DEA R++ +S R L +Y
Sbjct: 369 TKTMRENQTQYKFNVMLTSYEFISVDAAFLGCIDWAALVVDEAHRLRSNQSKFFRILSKY 428
Query: 1149 RCQRRLLLTGTPLQNDLKELWSLLNLLLPEVFDNRKAFHDWFSQPFQKEGPTHNADDDWL 1208
R +LLLTGTPLQN+L+EL+ LLN L F++ + F F+ ++E
Sbjct: 429 RIGYKLLLTGTPLQNNLEELFHLLNFLSSGKFNDLQTFQAEFTDVSKEEQ---------- 478
Query: 1209 ETEKKVIIIHRLHQILEPFMLRRRVEDVEGSLPPKVSIVLRCRMSAIQSAIYDWIKATGT 1268
+ RLH+ILEP MLRR DV S+PPK ++R +S++Q Y I T
Sbjct: 479 --------VKRLHEILEPHMLRRLKADVLKSMPPKSEFIVRVELSSMQKKFYKHI-LTKN 529
Query: 1269 LRVDPEDEKRRVQKNPIYQAKVYKTLNNRCMELRKTCNHPLLNYPYFSD---------LS 1319
+ + RV +L N M+LRK CNHP L +P ++
Sbjct: 530 FKALNQKGGGRVC-----------SLLNIMMDLRKCCNHPYL-FPSAAEEATISPSGLYE 577
Query: 1320 KDFLVKSCGKLWILDRILIKLQRTGHRVLLFSTMTKLLDILEEYLQWRQLVYRRIDGTTS 1379
L K+ GKL +L ++L +L+ HRVLLFS MTK+L++LE +L+ Y RIDG+
Sbjct: 578 MSSLTKASGKLDLLSKMLKQLKADNHRVLLFSQMTKMLNVLEHFLEGEGYQYDRIDGSIK 637
Query: 1380 LEDRESAIVDFNSHDSDCFIFLLSIRAAGRGLNLQSADTVIIYDPDPNPKNEEQAVARAH 1439
+ R+ AI FN S+ F+FLLS RA G G+NL +ADTVII+D D NP N+ QA +RAH
Sbjct: 638 GDLRQKAIDRFNDPVSEHFVFLLSTRAGGLGINLATADTVIIFDSDWNPHNDVQAFSRAH 697
Query: 1440 RIGQKREVKV 1449
R+GQK++V +
Sbjct: 698 RMGQKKKVMI 707
>sp|Q8TD26|CHD6_HUMAN Chromodomain-helicase-DNA-binding protein 6 OS=Homo sapiens GN=CHD6
PE=1 SV=4
Length = 2715
Score = 317 bits (813), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 184/480 (38%), Positives = 261/480 (54%), Gaps = 67/480 (13%)
Query: 1001 LRDYQIVGLQWMLSLYNNKLNGILADEMGLGKTVQVMALIAYLMEFKGNYGPHLIIVPNA 1060
LR+YQ+ G+ W+L + N+ N ILADEMGLGKT+Q + ++ + +G +GP LII P +
Sbjct: 461 LREYQLEGMNWLLFNWYNRKNCILADEMGLGKTIQSITFLSEIF-LRGIHGPFLIIAPLS 519
Query: 1061 VLVNWKSELHKWLPSVSCIYYVGAKDQRSRLFSQEV-----------AALKFNVLVTTYE 1109
+ NW+ E W ++ I Y G++ R + E+ KF+V++TT+E
Sbjct: 520 TITNWEREFRTWT-EMNAIVYHGSQISRQMIQQYEMVYRDAQGNPLSGVFKFHVVITTFE 578
Query: 1110 FIMYDRSKLSKVDWKYIIIDEAQRMKDRESVLARDLDRYRCQRRLLLTGTPLQNDLKELW 1169
I+ D +L K+ W +IIDEA R+K+R L L + ++LLTGTPLQN ++EL+
Sbjct: 579 MILADCPELKKIHWSCVIIDEAHRLKNRNCKLLEGLKLMALEHKVLLTGTPLQNSVEELF 638
Query: 1170 SLLNLLLPEVFDNRKAFHDWFSQPFQKEGPTHNADDDWLETEKKVIIIHRLHQILEPFML 1229
SLLN L P F + AF + F L+TE++V +L IL+P ML
Sbjct: 639 SLLNFLEPSQFPSETAFLEEFGD---------------LKTEEQV---KKLQSILKPMML 680
Query: 1230 RRRVEDVEGSLPPKVSIVLRCRMSAIQSAIYDWIKATGTLRVDPEDEKRRVQKNPIYQAK 1289
RR +DVE +L PK ++ ++ IQ Y I ++KN + K
Sbjct: 681 RRLKDDVEKNLAPKQETIIEVELTNIQKKYYRAI----------------LEKNFSFLTK 724
Query: 1290 VYKTLN-----NRCMELRKTCNHPLL---------------NYPYFSDLSKDFLVKSCGK 1329
N N MELRK CNHP L + P D ++++ GK
Sbjct: 725 GANQHNMPNLINTMMELRKCCNHPYLINGAEEKILEDFRKTHSPDAPDFQLQAMIQAAGK 784
Query: 1330 LWILDRILIKLQRTGHRVLLFSTMTKLLDILEEYLQWRQLVYRRIDGTTSLEDRESAIVD 1389
L ++D++L KL GH+VL+FS M + LDILE+YL R+ Y RIDG R++AI
Sbjct: 785 LVLIDKLLPKLIAGGHKVLIFSQMVRCLDILEDYLIQRRYTYERIDGRVRGNLRQAAIDR 844
Query: 1390 FNSHDSDCFIFLLSIRAAGRGLNLQSADTVIIYDPDPNPKNEEQAVARAHRIGQKREVKV 1449
F DSD F+FLL RA G G+NL +ADT II+D D NP+N+ QA AR HRIGQ + VKV
Sbjct: 845 FCKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKV 904
>sp|Q3B7N1|CHD1L_BOVIN Chromodomain-helicase-DNA-binding protein 1-like OS=Bos taurus
GN=CHD1L PE=2 SV=1
Length = 897
Score = 316 bits (810), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 186/474 (39%), Positives = 266/474 (56%), Gaps = 41/474 (8%)
Query: 985 VNERVMRQPSMLRAGTLRDYQIVGLQWMLSLYNNKLNGILADEMGLGKTVQVMALIAYLM 1044
V E+ +RQ L LR YQ+ G+ W+ ++ + IL DEMGLGKT Q +AL YL
Sbjct: 33 VQEQDLRQWG-LTGIHLRPYQLQGVNWLAQCFHCQNGCILGDEMGLGKTCQTIALFIYLA 91
Query: 1045 EFKGNYGPHLIIVPNAVLVNWKSELHKWLPSVSCIYYVGAKDQRSRLFSQEVAALKFNVL 1104
+ GP LI+ P +VL NWK E+ ++ P +SC+ Y G KD+R+ L +F+VL
Sbjct: 92 GRLNDEGPFLILCPLSVLSNWKEEMERFAPGLSCVTYAGDKDKRACLQQDLKQESRFHVL 151
Query: 1105 VTTYEFIMYDRSKLSKVDWKYIIIDEAQRMKDRESVLARDLDRYRCQRRLLLTGTPLQND 1164
+TTYE + D S L W +++DEA R+K++ S+L + L + LLLTGTP+QN
Sbjct: 152 LTTYEICLKDASFLKSFPWSVLVVDEAHRLKNQSSLLHKTLSEFSVVFSLLLTGTPIQNS 211
Query: 1165 LKELWSLLNLLLPEVFDNRKAFHDWFSQPFQKEGPTHNADDDWLETEKKVIIIHRLHQIL 1224
L+EL+SLL+ + P++F + + F Q +Q + EK+ L+++L
Sbjct: 212 LQELYSLLSFVEPDLFSKEQV--EDFVQRYQ-------------DIEKESESASELYKLL 256
Query: 1225 EPFMLRRRVEDVEGSLPPKVSIVLRCRMSAIQSAIYDWIKATGTLRVDPEDEKRRVQKNP 1284
+PF+LRR +V LP K +V+ MSA+Q Y I + E K+
Sbjct: 257 QPFLLRRVKAEVATELPRKTEVVIYHGMSALQKKYYKAILMKDLDAFENETAKK------ 310
Query: 1285 IYQAKVYKTLNNRCMELRKTCNHPLLNYPYFSDLS------KDFLVKSCGKLWILDRILI 1338
L N +LRK +HP L F + D L+++ GKL +LD++L
Sbjct: 311 -------VKLQNVLSQLRKCVDHPYL----FDGVEPEPFEIGDHLIEASGKLHLLDKLLA 359
Query: 1339 KLQRTGHRVLLFSTMTKLLDILEEYLQWRQLVYRRIDGTTSLEDRESAIVDFNSHDSDCF 1398
L GHRVLLFS MT++LDIL++YL +R Y R+DG+ E+R AI +F F
Sbjct: 360 FLYSKGHRVLLFSQMTQMLDILQDYLDYRGYSYERVDGSVRGEERHLAIKNFGQQ--PIF 417
Query: 1399 IFLLSIRAAGRGLNLQSADTVIIYDPDPNPKNEEQAVARAHRIGQKREVKVIYM 1452
FLLS RA G G+NL +ADTVI +D D NP+N+ QA ARAHRIGQ + VKVI +
Sbjct: 418 TFLLSTRAGGVGMNLTAADTVIFFDSDFNPQNDLQAAARAHRIGQNKSVKVIRL 471
>sp|Q86WJ1|CHD1L_HUMAN Chromodomain-helicase-DNA-binding protein 1-like OS=Homo sapiens
GN=CHD1L PE=1 SV=2
Length = 897
Score = 315 bits (807), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 186/477 (38%), Positives = 265/477 (55%), Gaps = 41/477 (8%)
Query: 982 AHAVNERVMRQPSMLRAGTLRDYQIVGLQWMLSLYNNKLNGILADEMGLGKTVQVMALIA 1041
A V E+ +RQ L LR YQ+ G+ W+ ++ + IL DEMGLGKT Q +AL
Sbjct: 28 AARVQEQDLRQWG-LTGIHLRSYQLEGVNWLAQRFHCQNGCILGDEMGLGKTCQTIALFI 86
Query: 1042 YLMEFKGNYGPHLIIVPNAVLVNWKSELHKWLPSVSCIYYVGAKDQRSRLFSQEVAALKF 1101
YL + GP LI+ P +VL NWK E+ ++ P +SC+ Y G K++R+ L +F
Sbjct: 87 YLAGRLNDEGPFLILCPLSVLSNWKEEMQRFAPGLSCVTYAGDKEERACLQQDLKQESRF 146
Query: 1102 NVLVTTYEFIMYDRSKLSKVDWKYIIIDEAQRMKDRESVLARDLDRYRCQRRLLLTGTPL 1161
+VL+TTYE + D S L W +++DEA R+K++ S+L + L + LLLTGTP+
Sbjct: 147 HVLLTTYEICLKDASFLKSFPWSVLVVDEAHRLKNQSSLLHKTLSEFSVVFSLLLTGTPI 206
Query: 1162 QNDLKELWSLLNLLLPEVFDNRKAFHDWFSQPFQKEGPTHNADDDWLETEKKVIIIHRLH 1221
QN L+EL+SLL+ + P++F + F Q +Q + EK+ LH
Sbjct: 207 QNSLQELYSLLSFVEPDLFSKEEVGD--FIQRYQ-------------DIEKESESASELH 251
Query: 1222 QILEPFMLRRRVEDVEGSLPPKVSIVLRCRMSAIQSAIYDWIKATGTLRVDPEDEKRRVQ 1281
++L+PF+LRR +V LP K +V+ MSA+Q Y I + E K+
Sbjct: 252 KLLQPFLLRRVKAEVATELPKKTEVVIYHGMSALQKKYYKAILMKDLDAFENETAKK--- 308
Query: 1282 KNPIYQAKVYKTLNNRCMELRKTCNHPLLNYPYFSDLS------KDFLVKSCGKLWILDR 1335
L N +LRK +HP L F + D L ++ GKL +LD+
Sbjct: 309 ----------VKLQNILSQLRKCVDHPYL----FDGVEPEPFEVGDHLTEASGKLHLLDK 354
Query: 1336 ILIKLQRTGHRVLLFSTMTKLLDILEEYLQWRQLVYRRIDGTTSLEDRESAIVDFNSHDS 1395
+L L GHRVLLFS MT++LDIL++Y+ +R Y R+DG+ E+R AI +F
Sbjct: 355 LLAFLYSGGHRVLLFSQMTQMLDILQDYMDYRGYSYERVDGSVRGEERHLAIKNFGQQ-- 412
Query: 1396 DCFIFLLSIRAAGRGLNLQSADTVIIYDPDPNPKNEEQAVARAHRIGQKREVKVIYM 1452
F+FLLS RA G G+NL +ADTVI D D NP+N+ QA ARAHRIGQ + VKVI +
Sbjct: 413 PIFVFLLSTRAGGVGMNLTAADTVIFVDSDFNPQNDLQAAARAHRIGQNKSVKVIRL 469
>sp|A2AJK6|CHD7_MOUSE Chromodomain-helicase-DNA-binding protein 7 OS=Mus musculus GN=Chd7
PE=1 SV=1
Length = 2986
Score = 313 bits (803), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 193/537 (35%), Positives = 288/537 (53%), Gaps = 81/537 (15%)
Query: 1001 LRDYQIVGLQWMLSLYNNKLNGILADEMGLGKTVQVMALIAYLMEFKGNYGPHLIIVPNA 1060
LR+YQ+ G+ W+L + N N ILADEMGLGKT+Q + + Y + KG +GP L+I P +
Sbjct: 958 LREYQLEGVNWLLFNWYNMRNCILADEMGLGKTIQSITFL-YEIYLKGIHGPFLVIAPLS 1016
Query: 1061 VLVNWKSELHKWLPSVSCIYYVGAKDQRSRLFSQEV-----------AALKFNVLVTTYE 1109
+ NW+ E W ++ + Y G++ R + E+ + KF+ ++TT+E
Sbjct: 1017 TIPNWEREFRTWT-ELNVVVYHGSQASRRTIQLYEMYFKDPQGRVIKGSYKFHAIITTFE 1075
Query: 1110 FIMYDRSKLSKVDWKYIIIDEAQRMKDRESVLARDLDRYRCQRRLLLTGTPLQNDLKELW 1169
I+ D +L + W+ ++IDEA R+K+R L L + ++LLTGTPLQN ++EL+
Sbjct: 1076 MILTDCPELRNIPWRCVVIDEAHRLKNRNCKLLEGLKMMDLEHKVLLTGTPLQNTVEELF 1135
Query: 1170 SLLNLLLPEVFDNRKAFHDWFSQPFQKEGPTHNADDDWLETEKKVIIIHRLHQILEPFML 1229
SLL+ L P F + F F L+TE++V +L IL+P ML
Sbjct: 1136 SLLHFLEPSRFPSETTFMQEFGD---------------LKTEEQV---QKLQAILKPMML 1177
Query: 1230 RRRVEDVEGSLPPKVSIVLRCRMSAIQSAIYDWIKATGTLRVDPEDEKRRVQKNPIY--- 1286
RR EDVE +L PK ++ ++ IQ Y I ++KN +
Sbjct: 1178 RRLKEDVEKNLAPKEETIIEVELTNIQKKYYRAI----------------LEKNFTFLSK 1221
Query: 1287 ---QAKVYKTLNNRCMELRKTCNHP-LLN------YPYFSDL----SKDF----LVKSCG 1328
QA V LN MELRK CNHP L+N F + S DF ++++ G
Sbjct: 1222 GGGQANVPNLLNT-MMELRKCCNHPYLINGAEEKILEEFKETHNAESPDFQLQAMIQAAG 1280
Query: 1329 KLWILDRILIKLQRTGHRVLLFSTMTKLLDILEEYLQWRQLVYRRIDGTTSLEDRESAIV 1388
KL ++D++L KL+ GHRVL+FS M + LDILE+YL R+ Y RIDG R++AI
Sbjct: 1281 KLVLIDKLLPKLKAGGHRVLIFSQMVRCLDILEDYLIQRRYPYERIDGRVRGNLRQAAID 1340
Query: 1389 DFNSHDSDCFIFLLSIRAAGRGLNLQSADTVIIYDPDPNPKNEEQAVARAHRIGQKREVK 1448
F+ DSD F+FLL RA G G+NL +ADT II+D D NP+N+ QA AR HRIGQ + VK
Sbjct: 1341 RFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKSVK 1400
Query: 1449 VIYMEAVVDKISSHQKEDELRSGGTVDLEDD------LAGKDRYIGSIEGLIRNNIQ 1499
+ + I+ + E E+ ++ L D ++G++ ++ L + I+
Sbjct: 1401 IYRL------ITRNSYEREMFDKASLKLGLDKAVLQSMSGRENATNGVQQLSKKEIE 1451
>sp|Q8BYH8|CHD9_MOUSE Chromodomain-helicase-DNA-binding protein 9 OS=Mus musculus GN=Chd9
PE=1 SV=2
Length = 2885
Score = 313 bits (803), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 191/536 (35%), Positives = 283/536 (52%), Gaps = 79/536 (14%)
Query: 1001 LRDYQIVGLQWMLSLYNNKLNGILADEMGLGKTVQVMALIAYLMEFKGNYGPHLIIVPNA 1060
LR+YQ+ GL W+L + N+ N ILADEMGLGKT+Q + + Y + G GP LII P +
Sbjct: 859 LREYQLEGLNWLLFNWYNRRNCILADEMGLGKTIQSITFL-YEILLTGIRGPFLIIAPLS 917
Query: 1061 VLVNWKSELHKWLPSVSCIYYVGAKDQRSRLFSQEV-----------AALKFNVLVTTYE 1109
+ NW+ E W ++ + Y G+ R + E+ A +F ++TT+E
Sbjct: 918 TIANWEREFRTWT-DINVVVYHGSLISRQMIQQYEMYFRDSQGRIIRGAYRFQAIITTFE 976
Query: 1110 FIMYDRSKLSKVDWKYIIIDEAQRMKDRESVLARDLDRYRCQRRLLLTGTPLQNDLKELW 1169
I+ +L+ +DW+ +IIDEA R+K++ L L + ++LLTGTPLQN ++EL+
Sbjct: 977 MILGGCGELNAIDWRCVIIDEAHRLKNKNCKLLEGLKLMNLEHKVLLTGTPLQNTVEELF 1036
Query: 1170 SLLNLLLPEVFDNRKAFHDWFSQPFQKEGPTHNADDDWLETEKKVIIIHRLHQILEPFML 1229
SLL+ L P F + F F L+TE++V +L IL+P ML
Sbjct: 1037 SLLHFLEPLRFPSESTFMQEFGD---------------LKTEEQV---QKLQAILKPMML 1078
Query: 1230 RRRVEDVEGSLPPKVSIVLRCRMSAIQSAIYDWIKATGTLRVDPEDEKRRVQKNPIYQAK 1289
RR EDVE L PK ++ ++ IQ Y I ++KN + +K
Sbjct: 1079 RRLKEDVEKKLAPKEETIIEVELTNIQKKYYRAI----------------LEKNFSFLSK 1122
Query: 1290 VYKTLN-----NRCMELRKTCNHPLL--------------NY-PYFSDLSKDFLVKSCGK 1329
N N MELRK CNHP L Y P SD +++S GK
Sbjct: 1123 GAGQTNVPNLVNTMMELRKCCNHPYLIKGAEEKILGEFRDTYNPSASDFHLQAMIQSAGK 1182
Query: 1330 LWILDRILIKLQRTGHRVLLFSTMTKLLDILEEYLQWRQLVYRRIDGTTSLEDRESAIVD 1389
L ++D++L K++ GH+VL+FS M + LDILE+YL ++ +Y RIDG R++AI
Sbjct: 1183 LVLIDKLLPKMKAGGHKVLIFSQMVRCLDILEDYLIHKRYLYERIDGRVRGNLRQAAIDR 1242
Query: 1390 FNSHDSDCFIFLLSIRAAGRGLNLQSADTVIIYDPDPNPKNEEQAVARAHRIGQKREVKV 1449
F+ DSD F+FLL RA G G+NL +ADT II+D D NP+N+ QA AR HRIGQ + VKV
Sbjct: 1243 FSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQNKAVKV 1302
Query: 1450 IYMEAVVDKISSHQKEDELRSGGTVDLEDD------LAGKDRYIGSIEGLIRNNIQ 1499
+ ++ + E E+ ++ L D ++G+D + I+ L + I+
Sbjct: 1303 YRL------VTRNSYEREMFDRASLKLGLDKAVLQSMSGRDSNVSGIQQLSKKEIE 1352
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.313 0.129 0.363
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 715,838,560
Number of Sequences: 539616
Number of extensions: 31505550
Number of successful extensions: 139190
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 461
Number of HSP's successfully gapped in prelim test: 1361
Number of HSP's that attempted gapping in prelim test: 107096
Number of HSP's gapped (non-prelim): 17089
length of query: 1953
length of database: 191,569,459
effective HSP length: 133
effective length of query: 1820
effective length of database: 119,800,531
effective search space: 218036966420
effective search space used: 218036966420
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 69 (31.2 bits)