Query 000171
Match_columns 1946
No_of_seqs 336 out of 553
Neff 4.7
Searched_HMMs 46136
Date Thu Mar 28 21:48:05 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/000171.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/000171hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0916 1,3-beta-glucan syntha 100.0 0E+00 0E+00 4457.6 96.9 1660 15-1940 11-1679(1679)
2 PF02364 Glucan_synthase: 1,3- 100.0 2E-268 5E-273 2454.6 50.6 710 1047-1794 1-794 (817)
3 PF14288 FKS1_dom1: 1,3-beta-g 100.0 1.6E-49 3.5E-54 402.9 7.8 116 318-434 1-117 (117)
4 KOG0917 Uncharacterized conser 99.9 6.6E-26 1.4E-30 251.9 11.6 121 33-162 3-128 (338)
5 PF04652 DUF605: Vta1 like; I 99.9 6.4E-23 1.4E-27 247.6 9.4 115 41-162 1-120 (380)
6 KOG0916 1,3-beta-glucan syntha 99.7 1.5E-18 3.3E-23 222.4 8.8 333 461-841 423-771 (1679)
7 PF02364 Glucan_synthase: 1,3- 98.2 6.5E-07 1.4E-11 115.9 2.4 42 1144-1185 101-142 (817)
8 PRK11204 N-glycosyltransferase 81.1 3.6 7.7E-05 51.5 7.5 143 1299-1461 111-257 (420)
9 PRK14583 hmsR N-glycosyltransf 79.7 8.7 0.00019 48.9 10.4 134 1312-1459 141-276 (444)
10 PRK11498 bcsA cellulose syntha 71.5 2.6 5.6E-05 57.8 2.8 188 1312-1519 325-522 (852)
11 cd02520 Glucosylceramide_synth 47.3 47 0.001 37.1 6.8 102 1312-1461 72-174 (196)
12 PF12823 DUF3817: Domain of un 33.6 1.3E+02 0.0028 31.1 6.9 68 1787-1859 13-81 (92)
13 CHL00032 ndhA NADH dehydrogena 33.6 4.2E+02 0.0091 33.8 12.6 27 1878-1904 158-186 (363)
14 TIGR03111 glyc2_xrt_Gpos1 puta 32.5 1.3E+02 0.0029 38.6 8.4 42 1312-1357 117-159 (439)
15 PF11457 DUF3021: Protein of u 29.3 5.7E+02 0.012 27.5 11.3 86 1817-1910 7-99 (136)
16 cd06421 CESA_CelA_like CESA_Ce 29.1 40 0.00086 37.9 2.7 138 1312-1461 70-208 (234)
17 KOG2033 Low density lipoprotei 28.7 1.3E+02 0.0029 40.5 7.2 121 59-197 647-799 (863)
18 COG5116 RPN2 26S proteasome re 26.5 73 0.0016 41.9 4.4 99 811-925 30-134 (926)
19 TIGR01667 YCCS_YHJK integral m 24.8 8.7E+02 0.019 33.7 14.2 41 1884-1925 502-542 (701)
20 COG1215 Glycosyltransferases, 23.5 77 0.0017 39.6 4.0 135 1298-1459 111-260 (439)
21 PRK14716 bacteriophage N4 adso 22.9 81 0.0018 41.6 4.1 26 1435-1460 260-285 (504)
22 PF10569 Thiol-ester_cl: Alpha 20.8 36 0.00078 28.7 0.2 11 1480-1490 9-19 (31)
23 TIGR03472 HpnI hopanoid biosyn 20.4 2.8E+02 0.006 34.8 7.9 130 1313-1458 113-247 (373)
No 1
>KOG0916 consensus 1,3-beta-glucan synthase/callose synthase catalytic subunit [Cell wall/membrane/envelope biogenesis]
Probab=100.00 E-value=0 Score=4457.62 Aligned_cols=1660 Identities=60% Similarity=0.935 Sum_probs=1526.2
Q ss_pred cccccccccCCCCCCCCCCCCCCCCcc-ChHHHHHHhhhhhccCCeehhhhHHHHHHHHhhcCCCCCChhhHHHHHHHHH
Q 000171 15 RRIMRTQTAGNLGESMFDSEVVPSSLS-EIAPILRVANEVESSNPRVAYLCRFYAFEKAHRLDPTSSGRGVRQFKTALLQ 93 (1946)
Q Consensus 15 ~~~~~~~~~~~~~~~~~dse~VP~sLK-~I~pfLrrA~Ele~~dP~VAY~Cr~YA~e~al~ld~~S~grgVrqFkt~LLd 93 (1946)
|..+.+...++.+ +.+|++.+|+++. +|+|++++|+++|++||++||.||+||+++ ++||+|+|+|++||++.++.
T Consensus 11 ~~~~~~~~~~~~~-~~~~~~~~~~s~~~~i~pilr~a~~i~~~~p~~a~l~~~~~~e~--~~D~~s~gr~v~qf~~~~~~ 87 (1679)
T KOG0916|consen 11 RSDDQTIYDGYEY-ESYDSSGLPSSLYDDIAPILRVANEIEQQNPRVAYLCRFHAFEK--RMDPTSSGRGVRQFKTLDLN 87 (1679)
T ss_pred hcchhhhccCCCC-CCCCcccCCcccccccchhhhccccccccCchhhhccccchHhh--cCCCCCCcchhhhhhhhhcc
Confidence 4445555545555 6788888888876 699999999999999999999999999999 99999999999999999992
Q ss_pred HHHHhcCccccccCCCchhHhHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHccCCCCcc-chHHHH
Q 000171 94 RLERENAPTYMERGKKSDAREMQSFYQHYYKKYIQALQNAADKADRAQLTKAYQTANVLFEVLKAVNLTESME-VDREIL 172 (1946)
Q Consensus 94 ~LEq~k~~~lk~~l~~~Da~~lq~fyq~YvE~fa~kLF~~Ad~~DRa~tak~F~tAsvLfeVL~~fg~~~~ve-v~~e~~ 172 (1946)
.. .+.+.+..++|..+.+.+++.+.++.+...-+. +...+..+.+.+|-.+.+| .+....... +++|++
T Consensus 88 ~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~v--a~~~~~~~p~~~~~i~ 157 (1679)
T KOG0916|consen 88 SY-----TSLGDSLAKSDAREYQSYYQYDYSMGINFGETA---EFNGDSYSIASVAYDLTNV--LWTAETEAPITAEEIL 157 (1679)
T ss_pred cc-----Ccccccccccchhhhhcccchhhhhhccccccc---hhhhhhhhhhhhhhhhccc--hhcccccCCCchHHHH
Confidence 21 223445667889988888888777665532111 2233344444444444444 444433444 689999
Q ss_pred HHhhhhhhcccCCCCCccccCCCCcchhhhhcchhHHHHHHHHHhcCCCCCCCCCCCCCcchHHHHHHHHhccccccccc
Q 000171 173 EAQDKVAEKTQIYVPYNILPLDPDSANQAIMRYPEIQAAVLALRYTRGLPWPNEHNKKKDEDILDWLQEMFGFQKDNVAN 252 (1946)
Q Consensus 173 ~~~~~~~~k~~~~~~YNIlPl~~~~~~~~~~~~pev~aA~~al~~~~~lp~p~~~~~~~~~DIfd~L~~~FGFQkDNVrN 252 (1946)
++..++++|.+.|.+|||+|++..+.++++|++|||+||++|+++++|||+|+ +++....|++| |+..||||+|||+|
T Consensus 158 ~i~~el~~K~~fq~~yNi~p~~~~~~ds~~sr~pe~~A~~sa~~~~~glp~~~-~kk~~fad~lD-l~~~fGFq~~nv~n 235 (1679)
T KOG0916|consen 158 EIFIELAAKFGFQSMYNILPLDMVLLDSRSSRMPEVQALLSAHADYIGLPRAN-YKKWYFADQLD-LDDEFGFQNMNVAN 235 (1679)
T ss_pred HHHHHHHHhcccccccccccccccccccchhcCCHHHHHHHHHhhcCCCCCcC-cCCCchhhhhh-hHHHhcccccchhh
Confidence 99999999999999999999999999999999999999999999999999998 45556789999 99999999999999
Q ss_pred hHHHHHHHHhhccccCCCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHhcCCCCCCCCcccchhHHHHHHHHHHHHHhhh
Q 000171 253 QREHLILLLANVHIRQFPKPDQQPKLDDRALTDVMKKLFKNYKRWCKYLDRKSSLWLPTIQQDVQQRKLLYMGLYLLIWG 332 (1946)
Q Consensus 253 QrEHLilLLaN~~sR~~p~~~~~~~L~~~aI~~l~~k~f~NYkKWC~~Lg~k~~~~~~~~~~~~~~~~Ll~IALYLLIWG 332 (1946)
||||++++|+|.++|..|+++..+++++.+++ ++||.+||+|||.++++|.|..+++.++++++||||||||||
T Consensus 236 qReh~il~lan~~~r~~~~~~~~~~~~~~~~~------~~ny~~wc~~L~~~~~~w~~~m~~~~~~~~ll~iaLYLLiWG 309 (1679)
T KOG0916|consen 236 QREHLILKLANAQIRKRPKPENPDKLDETAVR------FKNYVEWCKYLGSASYLWKPKMNQLSPQRMLLQIALYLLIWG 309 (1679)
T ss_pred hhhhHHHhhcchhhhccCCcccccccchhhhc------hhcccccchhhhhhhhhchhhhhhccHHHHHHHHHHHHHhhh
Confidence 99999999999999999999988999999985 999999999999999999999888899999999999999999
Q ss_pred cccccccchhHHHHHHHhhHHHHHhhhcCCCCCCCCCcccCCCCCCChhhhhhccchHHHHHHHHHHHhhCCCCCCCccc
Q 000171 333 EAANLRFMPECLCYIYHHMAFELYGMLAGNVSPMTGENVKPAYGGEDEAFLRKVVTPIYEVIAREAERSKRGKSKHSQWR 412 (1946)
Q Consensus 333 EAaNLRFMPECLCFIFH~MA~el~~~L~~~~s~~tg~~~~P~~~g~e~sFLd~VITPIY~~i~~E~~~~~~Gk~dHs~wr 412 (1946)
|||||||||||||||| |.|+++++.++.++.++ ..|.+ .+||++||||||++|++|++++++|++|||+||
T Consensus 310 EA~NvRFmPECLCyIf---a~el~~il~~~~~~~t~--~~P~~----~~FL~~VITPiY~~i~~e~~k~~~ge~~Hs~wr 380 (1679)
T KOG0916|consen 310 EANNVRFMPECLCFIF---ACELDYILSGEVSEVTG--PLPEY----SAFLDNVITPIYEFIRAEAYKSVRGEKDHSQWR 380 (1679)
T ss_pred hhhcccccHHHHHHHH---HHHHHHhhhhccccccC--CCcch----hhHHHhhhHHHHHHHHHHHHHhccCCCCchhhc
Confidence 9999999999999999 55888899999998887 45543 289999999999999999999999999999999
Q ss_pred cCCCcccccccccceeecccccCCCCcccCchhhhhhccccCCCCCCCCcccccceeEEeccccccccchhHHHHHHHHH
Q 000171 413 NYDDLNEYFWSVDCFRLGWPMRADADFFGLPIEQLRFEKSEDNKPANRDRWLGKVNFVEIRSFWHIFRSFDRMWSFFILC 492 (1946)
Q Consensus 413 NYDDiNEyFWs~~cf~L~wpm~~~~~ff~~p~~~~Ry~~l~~~~~~~~~~~~gKktFvE~RSf~Hl~rsF~RiWif~il~ 492 (1946)
||||+||||||++|| ++|||+++++||+.| ..+|
T Consensus 381 nYDDiNeyFWs~~~f-l~wp~~~~~~ff~~p-~~~~-------------------------------------------- 414 (1679)
T KOG0916|consen 381 NYDDINEYFWSPEGF-LGWPLRDGTDFFDLP-AEER-------------------------------------------- 414 (1679)
T ss_pred CcchHHHHhcCHHHH-hcCcccCCCcceeCC-HHHH--------------------------------------------
Confidence 999999999999999 999999999999998 4442
Q ss_pred HHHHHHhhccCCCCCCCccchhhHhHHHHHHHHHHHHHHHHHHHHHHhccccccccchhhHHHHHHHHHHHHHHHhhcce
Q 000171 493 LQVMIIVAWNGSGNPSSIFEVDVFKKVLSVFITAAILKLGQAILDVILNWKARRSMSFHVKLRYILKVVSAAAWVIVLPV 572 (1946)
Q Consensus 493 fqam~i~Afn~~~~~~~~~~~~~~~~~~sv~it~a~l~~~q~~Ldi~~~~~~~~~~~~~~~~R~~l~~~~~~~~~~v~p~ 572 (1946)
+|+|+++||+ +++++++++++|+ ++++|. ++.+|++.+|+
T Consensus 415 ~qal~iVaW~-----------dvf~k~l~~f~Tw--l~l~q~---------------------------fa~iWvi~~~v 454 (1679)
T KOG0916|consen 415 YQALIIVAWN-----------DVFYKVLSEFRTW--LHLLQN---------------------------FARIWVIHFSV 454 (1679)
T ss_pred HHHHHHHHHH-----------HHHHHHHHHHHHH--HHHHHH---------------------------HHHHHHHHHHH
Confidence 6777777776 4667777777777 666664 45567777777
Q ss_pred EEEEeccCCCCcccccccccCCCCCCchhHHHHHHHHHHHHHHHHHHHHcCcccccccccchhhhhhhhhccCCcccccc
Q 000171 573 TYAYTWENPPGFAQTIKSWFGSTANSPSLFILAVVIYLSPNMLSAVLFLFPFIRRVLERSNYRIVMLIMWWSQPRLYVGR 652 (1946)
Q Consensus 573 ~Y~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~v~~y~~p~i~~~~l~~~P~~~~~~~~s~~~~~~~~~w~~q~r~yvgr 652 (1946)
+|.+++.+ +++.|+.++.+|+.|+.++++++.+|.+|+.++++++.++.+++||+|||.|+|
T Consensus 455 ~y~~s~~n-----------------spt~y~~~~~~yl~p~~la~~~~~~p~~~~~v~~~~~~~~~~~~W~~~pr~~~G- 516 (1679)
T KOG0916|consen 455 FYYYSVYN-----------------SPTLYTKNVHIYLGPQPLAAVLWAVPALRGTVESLIMLIATLFEWWFVPRKFPG- 516 (1679)
T ss_pred HHHHHHhc-----------------CceeEEEeeeeecCCcHHHHHHHHHHHHHhHHHHHHHHHHHHHhhhcccccCCC-
Confidence 77665542 456788888999999999999999999999999999999999999999999999
Q ss_pred ccccccccchhhhhHHHHHHHHHhhhhhheeeccCchhhHHHhhcccccccccccccCCCCchhHHHHHHHHHHHHHHhh
Q 000171 653 GMHESAFSLFKYTLFWVLLIITKLAFSYYIEIKPLVGPTKDIMRVRITDFQWHEFFPRAKNNIGVVIALWAPIILVYFMD 732 (1946)
Q Consensus 653 gm~e~~~~~~~Y~~fWi~v~~~Kf~fSYf~~i~pLv~Ptr~i~~~~~~~y~w~~~~~~~~~n~~~l~~lw~p~~lvyf~D 732 (1946)
| |+|+|+...|+++++++|+|+++||+||
T Consensus 517 -------------------------------------p--------------h~~~~r~~~n~~~v~~~w~Pvv~Vy~md 545 (1679)
T KOG0916|consen 517 -------------------------------------P--------------HEFFPRFKNNIGVVIANWAPVVLVYFMD 545 (1679)
T ss_pred -------------------------------------c--------------hhhhHHHHHHHHHHHHHHhhHhheeehh
Confidence 1 8999988899999999999999999999
Q ss_pred HHHHHHHHHHHHhhHhhhhcccccccchhhHHHHHhhhhHHHHhcccCCCCCCccccccccccccccccCCCchhHHHhH
Q 000171 733 AQIWYAIFSTIFGGIYGAFRRLGEIRTLGMLRSRFQSLPGAFNGCLIPEERSEPKKKGLRATLSRNFAEIPSNKEKEAAR 812 (1946)
Q Consensus 733 tqIWY~I~sti~g~~~G~~~~LGEIr~~~~lr~~F~~lP~~f~~kli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 812 (1946)
|||||+|+|+++||++|+|+||||||+++ |+.+|++|+.++.|.++. ++...+-.|+. +.++.+++++.+
T Consensus 546 tqiwy~i~s~lvggivg~f~~lgeir~~~-----f~~lp~af~~~l~~~~~~--r~~~~~~~ft~---~~~~~~~~~a~~ 615 (1679)
T KOG0916|consen 546 TQIWYAIFSTLVGGIVGFFFHLGEIRTLS-----FQPLPGAFNAYLKPKESK--RKYLANKTFTA---KFAPLNGKEAAR 615 (1679)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhheeEeee-----eeEchHhHhhhcCCCchh--hhhhhhhcccc---cCCCcchHHHHH
Confidence 99999999999999999999999999999 999999999999998742 22122222222 345678899999
Q ss_pred HHHhHHHHHhhccccccCChhhhhhhcccccCCCCCCcccCchhhhcCchhHHHHHhhhhcCCcH-HHHHHhhhchhhhH
Q 000171 813 FAQLWNKVITSFREEDLISDREMNLLLVPYWADRDLGLIQWPPFLLASKIPIALDMAKDSNGKDR-ELKKRIEADDYMSC 891 (1946)
Q Consensus 813 fs~vWNeII~S~reEdLis~~e~~lL~~p~~~~~~~~~i~wP~FLla~ki~~Ald~a~~~~~~d~-~L~~~i~~d~y~~~ 891 (1946)
|+++||+||.|+|+||+|||+|+++|++|++.....+.. +||||+ ++|++||++..+++. +++++|+.|+||.|
T Consensus 616 f~~lWn~vi~a~r~Edyis~~e~~l~i~~l~~~~~~~~~---~flL~s--~la~~qaK~~~g~~~~~l~~~~~~DtYm~y 690 (1679)
T KOG0916|consen 616 FALLWNTVILAKREEDYISLRELRLLIRPLSTMSSYDCT---IFLLGS--PLALDQAKILLGKMYLTLLILFFLDTYLWY 690 (1679)
T ss_pred HHHHHHHHHHHhhhHHhhhccchhhhhcccccCCcccch---hHHhcc--HHHHHHHHHhcCchHHHHHHHHHHhhhHHH
Confidence 999999999999999999999999999997655333333 999999 999999999998666 99999999999999
Q ss_pred HHHHHHHHHHHHHHHHhcC--CchhHHHHHHHHHHHHHhhcccccccccCcccchHHHHHHHHHHHhhcCcchhhHHHHH
Q 000171 892 AVKECYASFRNIIKFLVQG--NEKRVIDDIFSEVDRHIEAGNLISEYKMSSLPSLYDHFVKLIKYLLDNKQEDRDQVVIL 969 (1946)
Q Consensus 892 Av~e~y~~~~~il~~l~~~--~~~~~i~~i~~~i~~~i~~~~~~~~f~~~~Lp~~~~~~~~L~~~L~~~~~~~~~~vv~~ 969 (1946)
||.|||+|+|.++..++.+ .++.|+++++++|+.+|.+.++..+|+++.||+++.++++|+ +. .++ +++
T Consensus 691 aV~e~y~Sik~~~~~~i~~~T~~r~i~~ri~~rI~~~I~~~~~~~~fk~~vL~~~~~~~i~i~---my--~e~----l~~ 761 (1679)
T KOG0916|consen 691 AVVETYFSIKKSFYLGISILTPWRNIFSRLPKRIYSKILATDLEIEFKPKVLPSQIWNAIKIS---MY--REH----LLA 761 (1679)
T ss_pred HHHHHHHHHHHHHHHhhhcCchHHHHHHHHHHHHHHHHHHhhHHHHhChhhhHHHHhhhhhee---hh--HHH----HHH
Confidence 9999999999999988887 799999999999999999999999999999999999999998 11 111 999
Q ss_pred HHHHHHHHHHhhhhhhhhhhhhhhccCCCCCCCCcccccccccccccccccCCCCCChHHHHHHHHHHHhhccccccccC
Q 000171 970 FQDMLEVVTRDIMMEDHISSLVESVHGGSGHEGLVPLEQRYQLFASSGAIRFPAPETEAWKEKIKRLYLLLTTKESAMDV 1049 (1946)
Q Consensus 970 l~~l~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~~~i~~p~~~~~~~~~~~~Rl~~lLt~k~sa~~~ 1049 (1946)
+|+++|++++|+++++.+ .++ ++|++|.+ ++|..+ |+|++|
T Consensus 762 lq~l~ell~~qv~~e~~~----------------~~~-~~~~ff~~--------~~d~~~--------------~s~~~~ 802 (1679)
T KOG0916|consen 762 LQHLQELLYHQVPSEGGG----------------QTL-KAPTFFVS--------QDDGSF--------------ESAEFV 802 (1679)
T ss_pred HHHHHHHHHHHhhhhccc----------------chh-hcchhhee--------cccccc--------------cchhhC
Confidence 999999999999976521 222 57899998 456655 678999
Q ss_pred CCChhhhHhHhhhhccCCCCCCCCccccccccceeecccccchhccchhhhhhcCCCcccHHHHHHhhCChhhhhHHHHh
Q 000171 1050 PSNLEARRRISFFSNSLFMDMPEAPKVRNMLSFSVLTPYYTEEVLFSLRDLEIHNEDGVSILFYLQKIFPDEWTNFLERV 1129 (1946)
Q Consensus 1050 P~n~EArRRisFFanSLfm~mP~a~~V~~M~SFSVLTPyYsE~VlySl~eL~~enedgvSiL~YLq~iyPdEW~NFlER~ 1129 (1946)
|+|+||||||+||||||||+||+||||++|||||||||||+||||||++||++||||||||||||||||||||+||+||+
T Consensus 803 P~n~EA~RRisFFa~SL~m~mP~a~~V~~M~sFsVLtP~YsE~vl~S~~el~~e~ed~vsiL~YLqki~pdEW~nFler~ 882 (1679)
T KOG0916|consen 803 PSNLEARRRISFFANSLFMPMPEAPPVRNMPSFSVLTPYYSEKVLYSLRELIRENEDGVSILFYLQKIYPDEWKNFLERT 882 (1679)
T ss_pred CccHHHHHHHHHHHHhhccCCCCCCcccccCceeeecccchhhhhhhHHHHhhcccCCeeHHHHHHHhCcHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCcch---hccCChhhHHHHHhhhhcccccccccccccccHHHHHHHHHhhhcccchhhhhhhhhhccCCCccchhhHH
Q 000171 1130 KCNNEE---ELKGSDELEEELRLWASYRGQTLTRTVRGMMYYRKALELQAFLDMAKHEDLMEGYKAIELNSDDKGERSLL 1206 (1946)
Q Consensus 1130 ~~~~~~---~~~~~~~~~~elRlWAS~RgQTL~RTVrGmMyY~~ALkll~~lE~~~~~~~~~g~~~~~~~~~~~~~~~~~ 1206 (1946)
||+++| |++..+++++|||+|||||||||||||||||||+|||||||++|+|++.++.+|.++ ....++
T Consensus 883 k~~~~e~~~dl~~~pe~~l~lR~WaS~RgQTL~RTvrGmMyY~rAlkL~~~~e~~~~~~~~~G~~~--------~~~~l~ 954 (1679)
T KOG0916|consen 883 KCLAEEKIDDLPFYPEYTLRLRIWASYRGQTLYRTVRGMMYYSRALKLLYFLENPEEVDLFEGDSN--------EDRSLE 954 (1679)
T ss_pred ccchhccccccccchhHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHHhhcchhhHHhcCCch--------hhhHHH
Confidence 999977 665567899999999999999999999999999999999999999999999998331 112599
Q ss_pred HHHHHHHhCcccEEEEeeeccCCCCCCchhhHHHHHHHHhCCCcEEEEeecccCCCCccccccccceEEEEEecccCCCC
Q 000171 1207 TQCQAVADMKFTYVVSCQLYGIHKRSGDARAQDILKLMTKYPSLRVAYIDEVEEPSKDRSKKINQKVYYSALVKAVPKSK 1286 (1946)
Q Consensus 1207 ~~~~~~a~~KFtyVvscQ~Yg~~k~~~d~~A~di~~Lm~~~P~LrVAYide~~~~~~g~~~~~~~~~yySvLvk~~~~~~ 1286 (1946)
+++++||+||||||||||+||.||+++|++|+||++||++||+||||||||++++.+++ +++||||||||+
T Consensus 955 ~~l~~~A~~KFtyvVscQ~Y~~~K~~~d~~ae~i~~Lm~~yp~LriAYide~e~~~~~~-----~~~~YS~Lvk~~---- 1025 (1679)
T KOG0916|consen 955 AELEAMADRKFTYVVSCQRYGNQKFSGDERAENILFLMRAYPSLRIAYIDEVEPPVEEG-----EPVYYSVLVKGD---- 1025 (1679)
T ss_pred HHHHHHHhccceEEEehhHhhhhccCCChHHHHHHHHHHhCccceEeeeccccccccCC-----CceEEEEeeecC----
Confidence 99999999999999999999999999999999999999999999999999988766543 569999999999
Q ss_pred CCCCCCCCccceEEEeecCCCcccCCCCcccccchhhhhcccccccccCCccchHHHHhhhhhhHHHHhhcCCCCCCceE
Q 000171 1287 DSSIPVQNLDQVIYRIKLPGPAILGEGKPENQNHAIIFTRGEGLQTIDMNQDNYMEEALKMRNLLQEFLKKHDGVRYPSI 1366 (1946)
Q Consensus 1287 ~~~~~~~~~~~eiYrikLPG~pilGEGKpeNQNhAiiF~RGE~lQtIDmNQDnyleE~lKmrnlL~ef~~~~~g~~~~~I 1366 (1946)
++.+++++|+||||||||||||||||||||||||||||||||||||||||||||||||||||||+||++.|.|.+||||
T Consensus 1026 -~~~~~~~~~~~iyrIkLpG~pilGeGKpeNQNhaiiFtRGE~iQtIDmNQDnYlEE~lKmRnlL~EF~~~~~g~r~ptI 1104 (1679)
T KOG0916|consen 1026 -CEIDENGLDQEIYRIKLPGPPILGEGKPENQNHAIIFTRGEAIQTIDMNQDNYLEEALKMRNLLQEFEELHLGIRPPTI 1104 (1679)
T ss_pred -cchhhcccccceEEEeCCCCCcCCCCCCcccCceeeeecchhhheecccchHHHHHHHHHHHHHHHHHhhcCCCCCCce
Confidence 5557799999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ecccceeecccchhhhhhcccchhhHHHHHHHhhcCccceeeeccCCcccccccccccCcccccccccccchhhhccccc
Q 000171 1367 LGLREHIFTGSVSSLAWFMSNQETSFVTIGQRLLANPLKVRFHYGHPDVFDRLFHLTRGGVSKASKIINLSEDIFAGFNS 1446 (1946)
Q Consensus 1367 lG~RE~IFt~~v~~La~f~a~qE~sF~Tl~qR~la~Pl~~r~HYGHPD~fd~~f~~trGGiSKAsk~i~lsEDifaG~n~ 1446 (1946)
||+|||||||||||||||||||||||||||||+||+|+||||||||||||||+||+||||||||||||||||||||||||
T Consensus 1105 lG~RE~IFt~svssLa~fms~qEqSFvTlgqR~LA~p~~vr~HYGHPD~~drif~~TRGGvSKAsk~inlsEDIfAG~n~ 1184 (1679)
T KOG0916|consen 1105 LGAREHIFTGSVSSLAWFMSGQEQSFVTLGQRTLANPGGVRLHYGHPDVFDRIFHITRGGVSKASKGINLSEDIFAGFNA 1184 (1679)
T ss_pred eeehhheecCCchHHHHHHccCccchhhHHHHHhccccceeeecCCCcHhhhhhhhccccchHhhcccccchHhhhhhhH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCcceeeeeeEEeccccccCccccccchhhhcCCCccccchhhhHhhccCcchhhhhhhhcccccchhhHHHHHHHHH
Q 000171 1447 TLREGNVTHHEYIQVGKGRDVGLNQISMFEAKIANGNGEQTLSRDLYRLGHRFDFFRMLSCYFTTIGFYFSTLITVLTVY 1526 (1946)
Q Consensus 1447 ~lRgG~ith~EYiQ~GKGRDvGlnqI~~FeaKIa~GnGEQ~lSRd~yrLg~~ldffR~LSfyyt~~Gfy~n~~~~vltvy 1526 (1946)
||||||||||||||||||||||||||+|||||||+|||||+||||||||||||||||||||||||||||||||+||+|||
T Consensus 1185 tlRgG~itH~EYiQvGKGRDvGlnqI~~FeaKia~G~GEQ~LSRd~YrLG~~ldffRmLSfyftt~GF~~n~m~ivltVy 1264 (1679)
T KOG0916|consen 1185 TLRGGNITHHEYIQVGKGRDVGLNQISNFEAKIANGNGEQTLSRDYYRLGTQLDFFRMLSFYFTTVGFYFNNMFIVLTVY 1264 (1679)
T ss_pred HhhCCCcccceeeecccccccCcchhhhhhhhhcCCCcchhhhHHHHHhcccccHHHHHHHHhccccHHHHhHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhcccccccccccccCCchhhhhccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccceEEE
Q 000171 1527 VFLYGRLYLVLSGLEEGLITQPAIRDNKPLQVALASQSFVQLGFMMSLPMLMEIGLERGFRTALSEFILMQLQLAPVFFT 1606 (1946)
Q Consensus 1527 ~fly~~lylalsgle~~~~~~~~~~~~~~l~~~l~~q~i~q~g~l~~lPm~~~~~lE~G~~~A~~~f~~m~lqlapvFf~ 1606 (1946)
+||||++|+++||+|+.+...+...++.+|+++|++|||||+|++|++||+||+++||||++|+.||++||+||||||||
T Consensus 1265 ~Fl~GrlYl~lsg~~~~~~~~~~~~~~~~l~~aL~~qsifqv~~~~~lPmv~e~~lErGf~~A~~~f~~mqlqLa~vF~t 1344 (1679)
T KOG0916|consen 1265 LFLYGRLYLVLSGYEKDISLTASPRGCYALEPALAWQSIFQVGFIMFLPMVMEIGLERGFLRALSRFIKMQLQLAPVFFT 1344 (1679)
T ss_pred HHHHHhHHHHHhhhhhccccccCCCccchHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHhee
Confidence 99999999999999999887777889999999999999999999999999999999999999999999999999999999
Q ss_pred EEeeeeEeeeccccccccceeeccCCceEEeecchhhhhhhhhhhhHHHHHHHHHHHHHHHHhcccccchhHHHHHHHHH
Q 000171 1607 FSLGTKTHYYGRTLLHGGAKYRSTGRGFVVFHAKFADNYRLYSRSHFVKGIEMMILLIVYQIFGQSYRGAVAYILITISM 1686 (1946)
Q Consensus 1607 F~~gT~~hy~~rtilhGGAkYraTGRGFvv~h~~Fa~~Yr~YarSHf~kg~El~llli~y~~yg~~~~~~~~y~~~T~S~ 1686 (1946)
|+||||+|||||||+|||||||||||||||+|+||++|||+|||||||||+|+++||+||.+||+.|+++.+|++.|+|+
T Consensus 1345 F~~gt~~hy~~rtllhGGAkYr~TGRGFvv~h~~FsenYrlysrshfvkg~el~lmLlvy~~fg~~~~~~~~y~~~~i~~ 1424 (1679)
T KOG0916|consen 1345 FSLGTYTHYFGRTLLHGGAKYRATGRGFVVFHAKFSENYRLYSRSHFVKGSELMLLLLVYQIFGPAYRSSTVYILITISF 1424 (1679)
T ss_pred eeccchhHhhhhHhhcCCeeeeccCcceEEEeccHHHHHHHhhhhHHHHHHHHHHHHHHHHHhCccccchHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhcccccCCCCccchhHHhhHHHHHHHhhcCCCCCCCCCCchhHHhHHHHhhhhccCcchhHHHHHHHHHHHH
Q 000171 1687 WFMVGTWLFAPFLFNPSGFEWQKIVDDWTDWNKWISNRGGIGVPPEKSWESWWEEEQEHLQHSGKRGIIAEIVLALRFFI 1766 (1946)
Q Consensus 1687 Wf~~~swl~aPf~FNP~gF~w~k~~~D~~~w~~Wl~~~g~~~~~~~~sW~~ww~~e~~~~~~~~~~~~~~~~i~~lrf~~ 1766 (1946)
||+++|||||||+||||||+|+|+|+||+||++||++|||+|++++|||++||++|++|++++|.+|+++||++++|||+
T Consensus 1425 Wf~v~swlfAPFlFNPsgF~W~~~v~D~~d~~rWl~~rG~~~~~~~~SW~~ww~~e~~hl~~~~~~G~~~Ei~l~l~f~~ 1504 (1679)
T KOG0916|consen 1425 WFLVGSWLFAPFLFNPSGFEWQKFVDDYRDWIRWLWSRGGIGVHAEKSWESWWEEEQEHLTGSGRRGRFLEIILPLRFFF 1504 (1679)
T ss_pred HHHHHHHHhcccccCcccccHHHHHhhHHHHHHHHHhcCCCCCCccccHHHHHHHHHHHHhccCccchhHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhheeeEeeccc-ccceeeehhHHHHHHHHHHHHHhhhhcccccccccchhHHHHHHHHHHHHHHHHHHHHHHcccccH
Q 000171 1767 YQYGLVYHLKMTK-HTKSFLVYGVSWLVIFLVLFVMKTVSVGRRKFSANFQLVFRLIKGLIFLTFISILVTLIALPHMTV 1845 (1946)
Q Consensus 1767 ~~~g~vy~l~i~~-~~~~~~v~~~sw~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~ 1845 (1946)
||||+||+||+.. .++++.||++||+++++++++++.++++++|+++++|+++|++|+++|++++.+++++..++++++
T Consensus 1505 f~~~~~~~ln~~~g~~~~~~v~~~s~~~i~~v~~~~~~~~~~~kk~g~~~~~~~r~i~~~~~~~~~~v~~~l~~~~~~~~ 1584 (1679)
T KOG0916|consen 1505 FQYGIVYFLNIQPGTNTSLRVYILSWAPIAAVLFLFKLLGMCRKKFGAVFALLARFIKVLVFLLFFEVMWVLEGWSFLTT 1584 (1679)
T ss_pred hhheeeEEEeccCCCCceEeehhhHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccH
Confidence 9999999999988 599999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHhhHHHHHHHHHHHhhhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHhhhccccchhhhhhhchhhccc
Q 000171 1846 RDIIVCILAFMPTGWGMLLIAQALKPVIHRAGFWGSVRTLARGYEIVMGLLLFTPVAFLAWFPFVSEFQTRMLFNQAFSR 1925 (1946)
Q Consensus 1846 ~d~~~~~la~~~~gw~~~~i~~~~~~~~~~~~~w~~v~~~a~~~d~~~g~~~~~p~~~ls~~p~~~~~Qtr~lfn~afsr 1925 (1946)
.|+|+|+|||+||||++++|+|++||+.++.++|++|+.+||+||++||++||+|+|+|+||||+++|||||||||||||
T Consensus 1585 ~d~~~~~la~~~t~~~~l~i~~~~r~~~~~~~~W~~~~~~~~ayd~~mg~li~~p~a~l~w~Pfi~~fqtr~LFn~afSR 1664 (1679)
T KOG0916|consen 1585 VDLFVSILAFHPTGWGLLLIAQLTREVKKDLGWWSGVWYLARAYDFFMGHLIFFPVAPLSWFPFISEFQTRMLFNQAFSR 1664 (1679)
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHHHHHHhccchhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHhcccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccchhhhcccCCcCC
Q 000171 1926 GLQISRILGGQRKDR 1940 (1946)
Q Consensus 1926 ~l~i~~ilag~~~~~ 1940 (1946)
||||++||+|++++.
T Consensus 1665 ~l~i~~Il~gk~~~~ 1679 (1679)
T KOG0916|consen 1665 GLRISRILAGKQKKL 1679 (1679)
T ss_pred cCCcchhhccCccCC
Confidence 999999999999863
No 2
>PF02364 Glucan_synthase: 1,3-beta-glucan synthase component ; InterPro: IPR003440 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. This is the glycosyltransferase 48 family GT48 from CAZY, which consists of various 1,3-beta-glucan synthase components including Gls1, Gls2 and Gls3 from yeast. 1,3-beta-glucan synthase (2.4.1.34 from EC) also known as callose synthase catalyses the formation of a beta-1,3-glucan polymer that is a major component of the fungal cell wall []. The reaction catalysed is:- UDP-glucose + {1,3-beta-D-glucosyl}(N) = UDP + {1,3-beta-D-glucosyl}(N+1).; GO: 0003843 1,3-beta-D-glucan synthase activity, 0006075 1,3-beta-D-glucan biosynthetic process, 0000148 1,3-beta-D-glucan synthase complex, 0016020 membrane
Probab=100.00 E-value=2.3e-268 Score=2454.60 Aligned_cols=710 Identities=56% Similarity=0.887 Sum_probs=652.4
Q ss_pred ccCCCChhhhHhHhhhhccCCCCCCCCccccccccceeecccccchhccchhhhhhcCC--CcccHHHHHHhhCChhhhh
Q 000171 1047 MDVPSNLEARRRISFFSNSLFMDMPEAPKVRNMLSFSVLTPYYTEEVLFSLRDLEIHNE--DGVSILFYLQKIFPDEWTN 1124 (1946)
Q Consensus 1047 ~~~P~n~EArRRisFFanSLfm~mP~a~~V~~M~SFSVLTPyYsE~VlySl~eL~~ene--dgvSiL~YLq~iyPdEW~N 1124 (1946)
++||+|+||||||+|||||||||||+||||++|||||||||||+|||+||++||++||| ||||+|+|||+||||||+|
T Consensus 1 ~~~P~~~EA~RRisFFanSL~~~mP~~~~V~~M~sfsVLtP~Y~E~Vl~Sl~eL~ke~e~~~~vtlL~YLk~l~p~EW~n 80 (817)
T PF02364_consen 1 EFFPRNSEARRRISFFANSLFMPMPEPPPVEKMPSFSVLTPYYSEKVLYSLKELIKENEQNDGVTLLEYLKQLYPDEWEN 80 (817)
T ss_pred CCCCCchHHHHHHHHHHHhcCCCCcCCCchhhccccccccccccceeccCHHHhhhcccccCCccHHHHHHHHChHHHHH
Confidence 47999999999999999999999999999999999999999999999999999999999 9999999999999999999
Q ss_pred HHHHhccCcchh-c------------c-----------------CChhhHHHHHhhhhcccccccccccccccHHHHHHH
Q 000171 1125 FLERVKCNNEEE-L------------K-----------------GSDELEEELRLWASYRGQTLTRTVRGMMYYRKALEL 1174 (1946)
Q Consensus 1125 FlER~~~~~~~~-~------------~-----------------~~~~~~~elRlWAS~RgQTL~RTVrGmMyY~~ALkl 1174 (1946)
|+||+|++++++ . | ..++.++++|||||+|||||||||+|||||+||||+
T Consensus 81 F~er~k~~~~e~~~~~~~~~~~~~~~was~r~qtL~rtv~Gfm~~~~a~~LrtrLWASlR~QTLyRTV~G~m~y~~Alkl 160 (817)
T PF02364_consen 81 FVERTKRLAEESDAEESSEKEEELRLWASYRGQTLPRTVRGFMYYEPAYTLRTRLWASLRGQTLYRTVSGFMNYSKALKL 160 (817)
T ss_pred HHHHhcccchhhhhhccccchhhhhHHHHhcccCCCchhhhhhhhhHHHHHHhhhhhccHHHhhhhhhhhhhhHHHHHhh
Confidence 999999987431 1 1 125579999999999999999999999999999999
Q ss_pred HHhhhcccchhhhhhhhhhccCCCccchhhHHHHHHHHHhCcccEEEEeeeccCCCCCCchhhHHHHHHHHhCCCcEEEE
Q 000171 1175 QAFLDMAKHEDLMEGYKAIELNSDDKGERSLLTQCQAVADMKFTYVVSCQLYGIHKRSGDARAQDILKLMTKYPSLRVAY 1254 (1946)
Q Consensus 1175 l~~lE~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~a~~KFtyVvscQ~Yg~~k~~~d~~A~di~~Lm~~~P~LrVAY 1254 (1946)
|+++|+++..+..+ ++.+.+++++++||++||+||||||+||+|| +++|+||++||++||+|||||
T Consensus 161 l~~~e~~~~~~~~~-----------~~~~~~~~~~~~~a~~KF~yVVs~Q~yg~~~---~~~a~~i~~Lm~~~P~LrVAY 226 (817)
T PF02364_consen 161 LYRVENPSIEQMFG-----------GNYESLERELEAMADRKFTYVVSCQRYGKFK---KEEAEDIEFLMRAYPSLRVAY 226 (817)
T ss_pred HhhccCCchhhhcc-----------CchHHHHHHHHHHHhcCCCEEEecchhcCCC---hHHHHHHHHHHHhCCceEEEE
Confidence 99999998766544 3457788999999999999999999999999 678999999999999999999
Q ss_pred eecccCCCCccccccccceEEEEEecccCCCCCCCCCCCCccceEEEeecCCCcccCCCCcccccchhhhhccccccccc
Q 000171 1255 IDEVEEPSKDRSKKINQKVYYSALVKAVPKSKDSSIPVQNLDQVIYRIKLPGPAILGEGKPENQNHAIIFTRGEGLQTID 1334 (1946)
Q Consensus 1255 ide~~~~~~g~~~~~~~~~yySvLvk~~~~~~~~~~~~~~~~~eiYrikLPG~pilGEGKpeNQNhAiiF~RGE~lQtID 1334 (1946)
|||+++..+| . +++||||||||+ +..+++|+++|+|||||||||||||||||||||||||||||||||||
T Consensus 227 ide~~~~~~~-~----~~~yYS~Lv~~~-----~~~~~~g~~~~~yri~LpG~pilGeGK~eNQNhaiiF~rGe~lQ~ID 296 (817)
T PF02364_consen 227 IDEVPDRNGG-G----EPEYYSVLVKGD-----CEIDENGKRQEIYRIKLPGNPILGEGKPENQNHAIIFTRGEYLQTID 296 (817)
T ss_pred EeeecccCCC-C----CceEEEEEecCC-----ccccccCcccceEEEECCCCCcCCCCCccccceeEEEEccccccccc
Confidence 9998865544 2 789999999999 55567899999999999999999999999999999999999999999
Q ss_pred CCccchHHHHhhhhhhHHHHhhcCC-------------CCCCceEecccceeecccchhhhhhcccchhhHHHHHHHhhc
Q 000171 1335 MNQDNYMEEALKMRNLLQEFLKKHD-------------GVRYPSILGLREHIFTGSVSSLAWFMSNQETSFVTIGQRLLA 1401 (1946)
Q Consensus 1335 mNQDnyleE~lKmrnlL~ef~~~~~-------------g~~~~~IlG~RE~IFt~~v~~La~f~a~qE~sF~Tl~qR~la 1401 (1946)
|||||||||||||||||+||++.+. +.+||||||+||||||||||+||||||+||||||||+||+||
T Consensus 297 mNQDnYleE~lK~rnlL~Ef~~~~~~~~~~~~~~~~~~~~~~~aIlG~RE~IFs~~vg~L~~~aa~qE~~F~Tl~qR~la 376 (817)
T PF02364_consen 297 MNQDNYLEEALKMRNLLEEFEEMHGDSSSPYIPGIEEEGKRPVAILGFREHIFSENVGSLGDFAAGQEQSFGTLFQRTLA 376 (817)
T ss_pred cchhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCCccccCCCCceEecccceEecCCcchHHHHhhhhhHHHHHHHHHHHh
Confidence 9999999999999999999998773 268999999999999999999999999999999999999999
Q ss_pred CccceeeeccCCcccccccccccCcccccccccccchhhhccccccccCcceeeeeeEEeccccccCccccccchhhhcC
Q 000171 1402 NPLKVRFHYGHPDVFDRLFHLTRGGVSKASKIINLSEDIFAGFNSTLREGNVTHHEYIQVGKGRDVGLNQISMFEAKIAN 1481 (1946)
Q Consensus 1402 ~Pl~~r~HYGHPD~fd~~f~~trGGiSKAsk~i~lsEDifaG~n~~lRgG~ith~EYiQ~GKGRDvGlnqI~~FeaKIa~ 1481 (1946)
+|+ |||||||||||||+||+||||||||||||||||||||||||+|||||||||||||||||||||||||++||||||+
T Consensus 377 ~p~-~rlHYGHPD~~n~~f~~TRGGvSKAsk~lhLsEDIfaG~n~~lRGG~i~h~ey~qcGKGRD~Gf~~I~~F~~KI~~ 455 (817)
T PF02364_consen 377 NPL-VRLHYGHPDVFNRIFMTTRGGVSKASKGLHLSEDIFAGMNATLRGGRIKHCEYIQCGKGRDVGFNSILNFETKIAS 455 (817)
T ss_pred cch-hhccCCCchhhhhhheeccCccchHhhcccccHHHHHHHHHHhcCCceeehhhhhcccccccCchhhhhhHhHhcC
Confidence 999 9999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccccchhhhHhhccCcchhhhhhhhcccccchhhHHHHHHHHHHHHHHHHHHHhhcccccccccccccCCc-------
Q 000171 1482 GNGEQTLSRDLYRLGHRFDFFRMLSCYFTTIGFYFSTLITVLTVYVFLYGRLYLVLSGLEEGLITQPAIRDNK------- 1554 (1946)
Q Consensus 1482 GnGEQ~lSRd~yrLg~~ldffR~LSfyyt~~Gfy~n~~~~vltvy~fly~~lylalsgle~~~~~~~~~~~~~------- 1554 (1946)
|||||+||||+|||||||||||||||||||||||||||+||+|||+|+| +|++|+|+++++. .|.++.++
T Consensus 456 G~GEQ~LSRe~yrLg~~ld~~R~LSfyy~~~Gf~~n~~~i~lsv~~f~~--~~~~L~~l~~~~~-~~~~~~~~~~~~~~g 532 (817)
T PF02364_consen 456 GMGEQMLSREYYRLGTRLDFFRFLSFYYAHPGFYINNMFIVLSVYLFLY--VYLNLSGLEHESI-ICAYDKNTDVLEPIG 532 (817)
T ss_pred CccchhhhHHHHHhhccCCHHHHHHHHhcCccHhHhhHHHHHHHHHHHH--HHHHHHHHHHHHH-hhhhhcCCCccCCcc
Confidence 9999999999999999999999999999999999999999999999999 7777778888763 34444431
Q ss_pred --hhhh-----hccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccceEEEEEeeeeEeeecccccccccee
Q 000171 1555 --PLQV-----ALASQSFVQLGFMMSLPMLMEIGLERGFRTALSEFILMQLQLAPVFFTFSLGTKTHYYGRTLLHGGAKY 1627 (1946)
Q Consensus 1555 --~l~~-----~l~~q~i~q~g~l~~lPm~~~~~lE~G~~~A~~~f~~m~lqlapvFf~F~~gT~~hy~~rtilhGGAkY 1627 (1946)
.|+. .+++||+||+|+++++||++|+++|+|+++|+.||++||+||||+||||+||||+|||++||+||||||
T Consensus 533 ~~~l~p~~~~~~~~~~si~q~g~l~~lPl~~q~~lE~G~~~A~~~~~~~~lslsp~F~vF~~qt~a~~~~~~l~~GGAkY 612 (817)
T PF02364_consen 533 CYNLQPVLDWIARNVQSIFQLGFLSFLPLIVQELLERGFWKALTRFFKHQLSLSPVFEVFSCQTYAHYFGRTLLHGGAKY 612 (817)
T ss_pred cccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHcccchheeeeeehhhhhhhhhhhcCccEE
Confidence 1333 457899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eccCCceEEeecchhhhhhhhhhhhHHHHHHHHHHHHHHHHhcccccchhHHHHHHHHHHHHHHHHhhcccccCCCCccc
Q 000171 1628 RSTGRGFVVFHAKFADNYRLYSRSHFVKGIEMMILLIVYQIFGQSYRGAVAYILITISMWFMVGTWLFAPFLFNPSGFEW 1707 (1946)
Q Consensus 1628 raTGRGFvv~h~~Fa~~Yr~YarSHf~kg~El~llli~y~~yg~~~~~~~~y~~~T~S~Wf~~~swl~aPf~FNP~gF~w 1707 (1946)
|||||||||+|++|++||++|||||||+|+|+++||++|.++ +|+..|+++||+++|||+||||||||||+|
T Consensus 613 iaTGRGF~i~r~~F~~lY~~YA~Sh~y~G~el~llLl~~~~~--------~y~~~~~~~W~~v~sll~aPFiFNP~~F~w 684 (817)
T PF02364_consen 613 IATGRGFVITRIPFAELYSRYARSHFYKGFELLLLLLFYTLT--------MYIPATLSFWFLVISLLFAPFIFNPHQFDW 684 (817)
T ss_pred EecCCceEEEeccHHHHHHHHhHHHHHHHHHHHHHHHHHHHH--------HHHHHHHHHHHHHHHHHHHHHhcCcccCch
Confidence 999999999999999999999999999999999999877775 999999999999999999999999999999
Q ss_pred hhHHhhHHHHHHHhhcCCCCCCCCCCchhHHhHHHHhhh--------------------hccCcchhHHHHHHHHHHHHH
Q 000171 1708 QKIVDDWTDWNKWISNRGGIGVPPEKSWESWWEEEQEHL--------------------QHSGKRGIIAEIVLALRFFIY 1767 (1946)
Q Consensus 1708 ~k~~~D~~~w~~Wl~~~g~~~~~~~~sW~~ww~~e~~~~--------------------~~~~~~~~~~~~i~~lrf~~~ 1767 (1946)
+|+++||+||++||++ |++.++++||++||++|++|+ |+++....+.|+++.++++++
T Consensus 685 ~~~~~Dy~dw~~Wl~~--g~~~~~~~SW~~w~~~~~~~~tg~k~k~~~~~~e~~~~~~~r~~~~~~~~~ei~~~l~~~~~ 762 (817)
T PF02364_consen 685 QKFFVDYRDWLRWLSR--GNSRPHDNSWISWWREERSRITGFKRKILEDISEKRFGDHLRASFFNLLFSEIILPLRFFIF 762 (817)
T ss_pred hHHHHhHHHHHHHHhc--CCCCccccccHHHHHHHHHHhccccceeeccchhccccccccceeeehhHHHHHHHHHHHHH
Confidence 9999999999999984 688999999999999987744 445556667788888888888
Q ss_pred hhheeeEeecccccc-----eeeehhHHHHHH
Q 000171 1768 QYGLVYHLKMTKHTK-----SFLVYGVSWLVI 1794 (1946)
Q Consensus 1768 ~~g~vy~l~i~~~~~-----~~~v~~~sw~~~ 1794 (1946)
+++.++++++..+.+ +.+++.++|.++
T Consensus 763 ~~~~y~finsq~~~~~~~~~n~l~Rl~i~~~~ 794 (817)
T PF02364_consen 763 QFIAYLFINSQNGVKSSQPVNSLLRLLIVTLI 794 (817)
T ss_pred HHhhheEEEcccCCCCCcccchHHHHHHHHHH
Confidence 888888888766544 344444444443
No 3
>PF14288 FKS1_dom1: 1,3-beta-glucan synthase subunit FKS1, domain-1
Probab=100.00 E-value=1.6e-49 Score=402.89 Aligned_cols=116 Identities=57% Similarity=1.092 Sum_probs=106.3
Q ss_pred HHHHHHHHHHHHhhhcccccccchhHHHHHHHhhHHHHHhhhcCCCCCCCCCcccCCCCCCChhhhhhccchHHHHHHHH
Q 000171 318 QRKLLYMGLYLLIWGEAANLRFMPECLCYIYHHMAFELYGMLAGNVSPMTGENVKPAYGGEDEAFLRKVVTPIYEVIARE 397 (1946)
Q Consensus 318 ~~~Ll~IALYLLIWGEAaNLRFMPECLCFIFH~MA~el~~~L~~~~s~~tg~~~~P~~~g~e~sFLd~VITPIY~~i~~E 397 (1946)
|++++|+|||||||||||||||||||||||||+||.+++.++++..++.++++. +..+.++++||++||||||+++++|
T Consensus 1 q~~l~~iaLYLLiWGEAaNlRfmPECLCfIFh~ma~~~~~~~~~~~~~~~~~~~-~~~~~~~~~FL~~VItPiY~~i~~q 79 (117)
T PF14288_consen 1 QDMLLQIALYLLIWGEAANLRFMPECLCFIFHHMAMDYYRSLESQGSENTGEPV-PPPSVPEGSFLDHVITPIYEFIRDQ 79 (117)
T ss_pred ChHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHHHhhhhccccccccCCC-CCCCCCchHHHHhhhHHHHHHHHHH
Confidence 578999999999999999999999999999999999999999887776666654 3345578899999999999999999
Q ss_pred HHHhhCCCCCCCccccCCCccccccccccee-eccccc
Q 000171 398 AERSKRGKSKHSQWRNYDDLNEYFWSVDCFR-LGWPMR 434 (1946)
Q Consensus 398 ~~~~~~Gk~dHs~wrNYDDiNEyFWs~~cf~-L~wpm~ 434 (1946)
++++++|++||++||||||||||||+++||+ |+||++
T Consensus 80 ~~~~~~~~~dH~~~~nYDDiNE~FW~~~cl~~l~~~~~ 117 (117)
T PF14288_consen 80 QYSSVRGEADHSDWRNYDDINEYFWSPECLKRLKWPDK 117 (117)
T ss_pred hHhhcCCCCCccccCCCCccHHhhcCHhhHhHhccCCC
Confidence 9999999999999999999999999999996 999874
No 4
>KOG0917 consensus Uncharacterized conserved protein [Function unknown]
Probab=99.93 E-value=6.6e-26 Score=251.95 Aligned_cols=121 Identities=29% Similarity=0.450 Sum_probs=114.2
Q ss_pred CCCCCCCccChHHHHHHhhhhhccCCeehhhhHHHHHHHHhhcCCCCCChhhHHHHHHHHHHHHHhcCccccccCCCchh
Q 000171 33 SEVVPSSLSEIAPILRVANEVESSNPRVAYLCRFYAFEKAHRLDPTSSGRGVRQFKTALLQRLERENAPTYMERGKKSDA 112 (1946)
Q Consensus 33 se~VP~sLK~I~pfLrrA~Ele~~dP~VAY~Cr~YA~e~al~ld~~S~grgVrqFkt~LLd~LEq~k~~~lk~~l~~~Da 112 (1946)
.++.|+. .|.|+||+|+|++++||+||||||+||+|.+|++|..+ .++|+|+++||++||+ +|+++++||+
T Consensus 3 ~p~~pa~--si~~~l~~a~e~~k~dpvvayycrlyamq~gmKid~qT--~e~rk~lsgLm~~lea-----lkkqlaDnea 73 (338)
T KOG0917|consen 3 LPPLPAQ--SIQHHLRTAQEHDKRDPVVAYYCRLYAMQTGMKIDSQT--PECRKFLSGLMDQLEA-----LKKQLADNEA 73 (338)
T ss_pred CCCCChH--HHHHHHHHHHhhcccccHHHHHHHHHHHHhcccCCccC--HHHHHHHHHHHHHHHH-----HHHHhcchhh
Confidence 4456665 89999999999999999999999999999999999766 9999999999999999 6678999999
Q ss_pred HhHHHHHHHHHHHHHHHHHHHHHhhhHH-----HHHHHHHHHHHHHHHHHHccCC
Q 000171 113 REMQSFYQHYYKKYIQALQNAADKADRA-----QLTKAYQTANVLFEVLKAVNLT 162 (1946)
Q Consensus 113 ~~lq~fyq~YvE~fa~kLF~~Ad~~DRa-----~tak~F~tAsvLfeVL~~fg~~ 162 (1946)
++++..+++|+|+||++||..||++||+ +++|+||||++|+|||.+||+.
T Consensus 74 itne~~aqaHiE~fAlklF~~ADKqdragr~dk~vvkaFYtA~~~~dILs~FGel 128 (338)
T KOG0917|consen 74 ITNEIVAQAHIENFALKLFLYADKQDRAGRFDKNVVKAFYTASLLIDILSVFGEL 128 (338)
T ss_pred hhhchHHHHHHHHHHHHHHHhhchhhhhcccchhHHHHHHHHHHHHHHHHHhcCC
Confidence 9999999999999999999999999999 7999999999999999999987
No 5
>PF04652 DUF605: Vta1 like; InterPro: IPR006745 This family contains proteins from the Eukaryota; functionally they are uncharacterised.; PDB: 2RKK_B 2RKL_B 3MHV_A.
Probab=99.88 E-value=6.4e-23 Score=247.64 Aligned_cols=115 Identities=37% Similarity=0.535 Sum_probs=100.6
Q ss_pred cChHHHHHHhhhhhccCCeehhhhHHHHHHHHhhcCCCCCChhhHHHHHHHHHHHHHhcCccccccCCCchhHhHHHHHH
Q 000171 41 SEIAPILRVANEVESSNPRVAYLCRFYAFEKAHRLDPTSSGRGVRQFKTALLQRLERENAPTYMERGKKSDAREMQSFYQ 120 (1946)
Q Consensus 41 K~I~pfLrrA~Ele~~dP~VAY~Cr~YA~e~al~ld~~S~grgVrqFkt~LLd~LEq~k~~~lk~~l~~~Da~~lq~fyq 120 (1946)
|.|.|||+||+|++++||+||||||+||+|+||+++. .++|+++|++.|||+||+.| +++.++|++.++..++
T Consensus 1 k~i~~~l~~a~e~~~~~p~v~Y~c~~ya~~~~l~~~~--~~~e~~~~~~~Ll~~lE~~K-----~~~~~~~~~~~~~~~~ 73 (380)
T PF04652_consen 1 KSISPFLKRAQELEKRDPVVAYYCRLYAVEQILKLKL--RSKECRQFLTSLLDKLEKMK-----AELGDNEAILDDVAAQ 73 (380)
T ss_dssp --HHHHHHHHHHHHHCTHHHHHHHHHHHHHHHTT-TT----HHHHHHHHHHHHHHHHHH-----HCT---CHHC-HHHHH
T ss_pred CchHHHHHHHHHHhhcCCEEhHHHHHHHHHHHcCCCC--CChhHHHHHHHHHHHHHHhh-----hccCcHHhhcCHHHHH
Confidence 6799999999999999999999999999999999987 55999999999999999965 4566778888999999
Q ss_pred HHHHHHHHHHHHHHHhhhHH-----HHHHHHHHHHHHHHHHHHccCC
Q 000171 121 HYYKKYIQALQNAADKADRA-----QLTKAYQTANVLFEVLKAVNLT 162 (1946)
Q Consensus 121 ~YvE~fa~kLF~~Ad~~DRa-----~tak~F~tAsvLfeVL~~fg~~ 162 (1946)
+|||+||++||++||++||+ +|+|+|++|++|||||++||+.
T Consensus 74 ~~v~~fa~~~f~~a~~~~~~~~~~~~~~~~f~~a~~~~~~l~~f~~~ 120 (380)
T PF04652_consen 74 AYVENFALKLFNRADKEDRAGRATKQTAKTFYAASTFFEVLNIFGEL 120 (380)
T ss_dssp HHHHHHHHHHHHHHHHHHHSS--SHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 99999999999999999987 7999999999999999999764
No 6
>KOG0916 consensus 1,3-beta-glucan synthase/callose synthase catalytic subunit [Cell wall/membrane/envelope biogenesis]
Probab=99.74 E-value=1.5e-18 Score=222.45 Aligned_cols=333 Identities=15% Similarity=0.174 Sum_probs=254.4
Q ss_pred CcccccceeEEeccccccccchhHHHHHHHHHHHHHHHhhccCCCCC----CCcc--chhhHhHHHHHHHHHHHHHHHHH
Q 000171 461 DRWLGKVNFVEIRSFWHIFRSFDRMWSFFILCLQVMIIVAWNGSGNP----SSIF--EVDVFKKVLSVFITAAILKLGQA 534 (1946)
Q Consensus 461 ~~~~gKktFvE~RSf~Hl~rsF~RiWif~il~fqam~i~Afn~~~~~----~~~~--~~~~~~~~~sv~it~a~l~~~q~ 534 (1946)
|+.+++|++.|.|||+|++.||+|||++|+.++| .++++|+++.+ .+.. ++-....+.+..++.++.++.+.
T Consensus 423 W~dvf~k~l~~f~Twl~l~q~fa~iWvi~~~v~y--~~s~~nspt~y~~~~~~yl~p~~la~~~~~~p~~~~~v~~~~~~ 500 (1679)
T KOG0916|consen 423 WNDVFYKVLSEFRTWLHLLQNFARIWVIHFSVFY--YYSVYNSPTLYTKNVHIYLGPQPLAAVLWAVPALRGTVESLIML 500 (1679)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHhcCceeEEEeeeeecCCcHHHHHHHHHHHHHhHHHHHHHH
Confidence 6788999999999999999999999999999999 58999998765 2223 45555788999999999999975
Q ss_pred HHHHHhccccccc-cchhhHHHHHHHHHHHHHHHhhcceEEEEeccCCCCcccccccccCCCCCC-chhHHHHHHHHHHH
Q 000171 535 ILDVILNWKARRS-MSFHVKLRYILKVVSAAAWVIVLPVTYAYTWENPPGFAQTIKSWFGSTANS-PSLFILAVVIYLSP 612 (1946)
Q Consensus 535 ~Ldi~~~~~~~~~-~~~~~~~R~~l~~~~~~~~~~v~p~~Y~~~~~~~~~~~~~~~~w~~~~~~~-~~~~~~~v~~y~~p 612 (1946)
+ ..+++|.++|+ +++++.+---.+..+.++.++.+|+++++.... . .++. .+.++.+++.+...
T Consensus 501 ~-~~~~~W~~~pr~~~Gph~~~~r~~~n~~~v~~~w~Pvv~Vy~mdt--------q-----iwy~i~s~lvggivg~f~~ 566 (1679)
T KOG0916|consen 501 I-ATLFEWWFVPRKFPGPHEFFPRFKNNIGVVIANWAPVVLVYFMDT--------Q-----IWYAIFSTLVGGIVGFFFH 566 (1679)
T ss_pred H-HHHHhhhcccccCCCchhhhHHHHHHHHHHHHHHhhHhheeehhh--------H-----HHHHHHHHHHHHHHHHHHH
Confidence 5 77789999984 888777621222345555678899999887641 1 1221 23445555555555
Q ss_pred HHHHHHHHHcCcccccc----cc-cchhhhhhhhhccCCccccccccccccccchhhhhHHHHHHHHHhhhhhheeeccC
Q 000171 613 NMLSAVLFLFPFIRRVL----ER-SNYRIVMLIMWWSQPRLYVGRGMHESAFSLFKYTLFWVLLIITKLAFSYYIEIKPL 687 (1946)
Q Consensus 613 ~i~~~~l~~~P~~~~~~----~~-s~~~~~~~~~w~~q~r~yvgrgm~e~~~~~~~Y~~fWi~v~~~Kf~fSYf~~i~pL 687 (1946)
......+.+.|+-.-+- -. +..+.+. .+.+.+........+......+|..|+.||+.|||++.. ++
T Consensus 567 lgeir~~~f~~lp~af~~~l~~~~~~r~~~~-------~~~ft~~~~~~~~~~a~~f~~lWn~vi~a~r~Edyis~~-e~ 638 (1679)
T KOG0916|consen 567 LGEIRTLSFQPLPGAFNAYLKPKESKRKYLA-------NKTFTAKFAPLNGKEAARFALLWNTVILAKREEDYISLR-EL 638 (1679)
T ss_pred hheeEeeeeeEchHhHhhhcCCCchhhhhhh-------hhcccccCCCcchHHHHHHHHHHHHHHHHhhhHHhhhcc-ch
Confidence 55444555555422111 11 1122221 222333334445556677789999999999999999999 99
Q ss_pred chhhHHHhhcc---cccccccccccCCCCchhHHHHHHHHHHHHHHhhHHHHHHHHHHHHhhHhhhhcccccccchhhHH
Q 000171 688 VGPTKDIMRVR---ITDFQWHEFFPRAKNNIGVVIALWAPIILVYFMDAQIWYAIFSTIFGGIYGAFRRLGEIRTLGMLR 764 (1946)
Q Consensus 688 v~Ptr~i~~~~---~~~y~w~~~~~~~~~n~~~l~~lw~p~~lvyf~DtqIWY~I~sti~g~~~G~~~~LGEIr~~~~lr 764 (1946)
.+|++.+..++ +..|.|+.-+|.. +++..+..+.+.++..+|+|||+||+|.+|++++-.. ..+| |+++|+||
T Consensus 639 ~l~i~~l~~~~~~~~~~flL~s~la~~-qaK~~~g~~~~~l~~~~~~DtYm~yaV~e~y~Sik~~--~~~~-i~~~T~~r 714 (1679)
T KOG0916|consen 639 RLLIRPLSTMSSYDCTIFLLGSPLALD-QAKILLGKMYLTLLILFFLDTYLWYAVVETYFSIKKS--FYLG-ISILTPWR 714 (1679)
T ss_pred hhhhcccccCCcccchhHHhccHHHHH-HHHHhcCchHHHHHHHHHHhhhHHHHHHHHHHHHHHH--HHHh-hhcCchHH
Confidence 99999975554 4578888888864 4889999999999999999999999999999999665 5799 89999999
Q ss_pred HHHhhhhHHHHhcccCCCCCCccccccccccccccccCCCchhHHHhHHHHhHHHHHhhccccccCChhhhhhhccc
Q 000171 765 SRFQSLPGAFNGCLIPEERSEPKKKGLRATLSRNFAEIPSNKEKEAARFAQLWNKVITSFREEDLISDREMNLLLVP 841 (1946)
Q Consensus 765 ~~F~~lP~~f~~kli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fs~vWNeII~S~reEdLis~~e~~lL~~p 841 (1946)
+.|+++|+++++||..+ ++ +.+.+++..-+|+||.|+.||+||||++.+++..|+++
T Consensus 715 ~i~~ri~~rI~~~I~~~-~~-------------------~~~fk~~vL~~~~~~~i~i~my~e~l~~lq~l~ell~~ 771 (1679)
T KOG0916|consen 715 NIFSRLPKRIYSKILAT-DL-------------------EIEFKPKVLPSQIWNAIKISMYREHLLALQHLQELLYH 771 (1679)
T ss_pred HHHHHHHHHHHHHHHHh-hH-------------------HHHhChhhhHHHHhhhhheehhHHHHHHHHHHHHHHHH
Confidence 99999999999999876 33 45788999999999999999999999999999988754
No 7
>PF02364 Glucan_synthase: 1,3-beta-glucan synthase component ; InterPro: IPR003440 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. This is the glycosyltransferase 48 family GT48 from CAZY, which consists of various 1,3-beta-glucan synthase components including Gls1, Gls2 and Gls3 from yeast. 1,3-beta-glucan synthase (2.4.1.34 from EC) also known as callose synthase catalyses the formation of a beta-1,3-glucan polymer that is a major component of the fungal cell wall []. The reaction catalysed is:- UDP-glucose + {1,3-beta-D-glucosyl}(N) = UDP + {1,3-beta-D-glucosyl}(N+1).; GO: 0003843 1,3-beta-D-glucan synthase activity, 0006075 1,3-beta-D-glucan biosynthetic process, 0000148 1,3-beta-D-glucan synthase complex, 0016020 membrane
Probab=98.18 E-value=6.5e-07 Score=115.94 Aligned_cols=42 Identities=62% Similarity=0.927 Sum_probs=38.7
Q ss_pred HHHHHhhhhcccccccccccccccHHHHHHHHHhhhcccchh
Q 000171 1144 EEELRLWASYRGQTLTRTVRGMMYYRKALELQAFLDMAKHED 1185 (1946)
Q Consensus 1144 ~~elRlWAS~RgQTL~RTVrGmMyY~~ALkll~~lE~~~~~~ 1185 (1946)
..++|+|||||||||+|||||||||++|++|+++++.+...+
T Consensus 101 ~~~~~~was~r~qtL~rtv~Gfm~~~~a~~LrtrLWASlR~Q 142 (817)
T PF02364_consen 101 EEELRLWASYRGQTLPRTVRGFMYYEPAYTLRTRLWASLRGQ 142 (817)
T ss_pred hhhhhHHHHhcccCCCchhhhhhhhhHHHHHHhhhhhccHHH
Confidence 567999999999999999999999999999999999986654
No 8
>PRK11204 N-glycosyltransferase; Provisional
Probab=81.15 E-value=3.6 Score=51.48 Aligned_cols=143 Identities=18% Similarity=0.157 Sum_probs=78.8
Q ss_pred EEEeecCCCcccCCCCcccccchhhhhcccccccccCCccchH-HHHhhhhhhHHHHhhcCCCCCCceEecccceeeccc
Q 000171 1299 IYRIKLPGPAILGEGKPENQNHAIIFTRGEGLQTIDMNQDNYM-EEALKMRNLLQEFLKKHDGVRYPSILGLREHIFTGS 1377 (1946)
Q Consensus 1299 iYrikLPG~pilGEGKpeNQNhAiiF~RGE~lQtIDmNQDnyl-eE~lKmrnlL~ef~~~~~g~~~~~IlG~RE~IFt~~ 1377 (1946)
+--|+.+.| .||+.|-|+|+-.++||++-++|.+ +.+ .++|+ .+++.|+++. .+.+++..=.+-. .
T Consensus 111 v~~i~~~~n----~Gka~aln~g~~~a~~d~i~~lDaD--~~~~~d~L~--~l~~~~~~~~----~v~~v~g~~~~~~-~ 177 (420)
T PRK11204 111 LRVIHLAEN----QGKANALNTGAAAARSEYLVCIDGD--ALLDPDAAA--YMVEHFLHNP----RVGAVTGNPRIRN-R 177 (420)
T ss_pred EEEEEcCCC----CCHHHHHHHHHHHcCCCEEEEECCC--CCCChhHHH--HHHHHHHhCC----CeEEEECCceecc-c
Confidence 334555554 4899999999999999999998765 444 33433 6666776432 3444443322222 2
Q ss_pred chhhhhhcccchhhHHHHHH---HhhcCccceeeeccCCcccccccccccCcccccccccccchhhhccccccccCccee
Q 000171 1378 VSSLAWFMSNQETSFVTIGQ---RLLANPLKVRFHYGHPDVFDRLFHLTRGGVSKASKIINLSEDIFAGFNSTLREGNVT 1454 (1946)
Q Consensus 1378 v~~La~f~a~qE~sF~Tl~q---R~la~Pl~~r~HYGHPD~fd~~f~~trGGiSKAsk~i~lsEDifaG~n~~lRgG~it 1454 (1946)
.+.++....+.-.+...+.+ +.+..+ -..-|+==.+.|.....-||...- .++||.--++-...+|.++.
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~G~~~~~rr~~l~~vgg~~~~----~~~ED~~l~~rl~~~G~~i~ 250 (420)
T PRK11204 178 STLLGRIQVGEFSSIIGLIKRAQRVYGRV---FTVSGVITAFRKSALHEVGYWSTD----MITEDIDISWKLQLRGWDIR 250 (420)
T ss_pred hhHHHHHHHHHHHHhhhHHHHHHHHhCCc---eEecceeeeeeHHHHHHhCCCCCC----cccchHHHHHHHHHcCCeEE
Confidence 23333333222222222222 222111 111132223333333445666532 36899999999888999998
Q ss_pred eeeeEEe
Q 000171 1455 HHEYIQV 1461 (1946)
Q Consensus 1455 h~EYiQ~ 1461 (1946)
++.-..|
T Consensus 251 ~~p~~~~ 257 (420)
T PRK11204 251 YEPRALC 257 (420)
T ss_pred eccccEE
Confidence 8776555
No 9
>PRK14583 hmsR N-glycosyltransferase; Provisional
Probab=79.70 E-value=8.7 Score=48.94 Aligned_cols=134 Identities=18% Similarity=0.114 Sum_probs=69.4
Q ss_pred CCCcccccchhhhhcccccccccCCccchH-HHHhhhhhhHHHHhhcCCCCCCceEecccceeecccchhhhhhcccchh
Q 000171 1312 EGKPENQNHAIIFTRGEGLQTIDMNQDNYM-EEALKMRNLLQEFLKKHDGVRYPSILGLREHIFTGSVSSLAWFMSNQET 1390 (1946)
Q Consensus 1312 EGKpeNQNhAiiF~RGE~lQtIDmNQDnyl-eE~lKmrnlL~ef~~~~~g~~~~~IlG~RE~IFt~~v~~La~f~a~qE~ 1390 (1946)
.||+-+.|+|+..++||++-++|+. +.+ .+++ +.+.+.|+++. .+.+++.+-.+... .+.++....++-.
T Consensus 141 ~Gka~AlN~gl~~a~~d~iv~lDAD--~~~~~d~L--~~lv~~~~~~~----~~g~v~g~~~~~~~-~~~~~~~~~~e~~ 211 (444)
T PRK14583 141 QGKAIALRMGAAAARSEYLVCIDGD--ALLDKNAV--PYLVAPLIANP----RTGAVTGNPRIRTR-STLIGRVQVGEFS 211 (444)
T ss_pred CCHHHHHHHHHHhCCCCEEEEECCC--CCcCHHHH--HHHHHHHHhCC----CeEEEEccceecCC-CcchhhHHHHHHH
Confidence 5899999999999999999999874 444 2333 35666675432 23333332222222 1223332222222
Q ss_pred hHHHHHHHhhcCccceeee-ccCCcccccccccccCcccccccccccchhhhccccccccCcceeeeeeE
Q 000171 1391 SFVTIGQRLLANPLKVRFH-YGHPDVFDRLFHLTRGGVSKASKIINLSEDIFAGFNSTLREGNVTHHEYI 1459 (1946)
Q Consensus 1391 sF~Tl~qR~la~Pl~~r~H-YGHPD~fd~~f~~trGGiSKAsk~i~lsEDifaG~n~~lRgG~ith~EYi 1459 (1946)
++..+.+|.... .+.-+- =|+==.|.|.-..-=||-+- -.+.||+--|+-...+|.+|.+++-.
T Consensus 212 ~~~~~~~~~~~~-~g~~~~~sG~~~~~rr~al~~vGg~~~----~~i~ED~dl~~rl~~~G~~i~~~p~a 276 (444)
T PRK14583 212 SIIGLIKRTQRV-YGQVFTVSGVVAAFRRRALADVGYWSP----DMITEDIDISWKLQLKHWSVFFEPRG 276 (444)
T ss_pred HHHHHHHHHHHH-hCCceEecCceeEEEHHHHHHcCCCCC----CcccccHHHHHHHHHcCCeEEEeecc
Confidence 222233332211 000000 01111122222222344431 14789999999999999999887743
No 10
>PRK11498 bcsA cellulose synthase catalytic subunit; Provisional
Probab=71.53 E-value=2.6 Score=57.79 Aligned_cols=188 Identities=20% Similarity=0.233 Sum_probs=113.5
Q ss_pred CCCcccccchhhhhcccccccccCCccchHH-HHhhhhhhHHHHhhcCCCCCCceEecccceeecccc--hhhhhh---c
Q 000171 1312 EGKPENQNHAIIFTRGEGLQTIDMNQDNYME-EALKMRNLLQEFLKKHDGVRYPSILGLREHIFTGSV--SSLAWF---M 1385 (1946)
Q Consensus 1312 EGKpeNQNhAiiF~RGE~lQtIDmNQDnyle-E~lKmrnlL~ef~~~~~g~~~~~IlG~RE~IFt~~v--~~La~f---~ 1385 (1946)
.||..|-|||+=.++||++-++|+.. ..+ ++|+ +++..|.++ ..+.+|+.+=+.++... ..++.+ .
T Consensus 325 ~gKAGnLN~aL~~a~GEyIavlDAD~--ip~pdfL~--~~V~~f~~d----P~VglVQtp~~f~n~dp~~rnl~~~~~~~ 396 (852)
T PRK11498 325 HAKAGNINNALKYAKGEFVAIFDCDH--VPTRSFLQ--MTMGWFLKD----KKLAMMQTPHHFFSPDPFERNLGRFRKTP 396 (852)
T ss_pred cchHHHHHHHHHhCCCCEEEEECCCC--CCChHHHH--HHHHHHHhC----CCeEEEEcceeccCCchHHHhhHHHhhcc
Confidence 58999999999999999999999854 332 2222 444566543 35778877666554321 112222 2
Q ss_pred ccchhhHHHHHHHhhcCccceeeeccCCcccccccccccCcccccccccccchhhhccccccccCcceeeee-eEEeccc
Q 000171 1386 SNQETSFVTIGQRLLANPLKVRFHYGHPDVFDRLFHLTRGGVSKASKIINLSEDIFAGFNSTLREGNVTHHE-YIQVGKG 1464 (1946)
Q Consensus 1386 a~qE~sF~Tl~qR~la~Pl~~r~HYGHPD~fd~~f~~trGGiSKAsk~i~lsEDifaG~n~~lRgG~ith~E-YiQ~GKG 1464 (1946)
.-+| .|-.+.|+.... ....+--|+-=++.|.-...=||..-- -++||.--++....+|-++.|.. =...|-
T Consensus 397 ~e~~-~fy~~iq~g~~~-~~a~~~~Gs~aviRReaLeeVGGfd~~----titED~dlslRL~~~Gyrv~yl~~~~a~gl- 469 (852)
T PRK11498 397 NEGT-LFYGLVQDGNDM-WDATFFCGSCAVIRRKPLDEIGGIAVE----TVTEDAHTSLRLHRRGYTSAYMRIPQAAGL- 469 (852)
T ss_pred cchh-HHHHHHHhHHHh-hcccccccceeeeEHHHHHHhcCCCCC----ccCccHHHHHHHHHcCCEEEEEeccceeEE-
Confidence 2222 344455554332 334455577667777767777888742 37999999999999999998864 333332
Q ss_pred cccCccccccch---hhhcCCCccccchhhhHhhccCcchhhhhhhhcccccchhhHH
Q 000171 1465 RDVGLNQISMFE---AKIANGNGEQTLSRDLYRLGHRFDFFRMLSCYFTTIGFYFSTL 1519 (1946)
Q Consensus 1465 RDvGlnqI~~Fe---aKIa~GnGEQ~lSRd~yrLg~~ldffR~LSfyyt~~Gfy~n~~ 1519 (1946)
.=.++..+- .+-+.| ..|.+.++---++..+.+.-=+ +|....=++++.+
T Consensus 470 ---aPesl~~~~~QR~RWarG-~lQi~r~~~pl~~~gL~~~qRl-~y~~~~l~~l~g~ 522 (852)
T PRK11498 470 ---ATESLSAHIGQRIRWARG-MVQIFRLDNPLTGKGLKLAQRL-CYANAMLHFLSGI 522 (852)
T ss_pred ---CCCCHHHHHHHHHHHHHH-HHHHHHHhChhccCCCCHHHHH-HHHHHHHHHHHHH
Confidence 234555543 446777 5778776644567777774333 3333333444443
No 11
>cd02520 Glucosylceramide_synthase Glucosylceramide synthase catalyzes the first glycosylation step of glycosphingolipid synthesis. UDP-glucose:N-acylsphingosine D-glucosyltransferase (glucosylceramide synthase or ceramide glucosyltransferase) catalyzes the first glycosylation step of glycosphingolipid synthesis. Its product, glucosylceramide, serves as the core of more than 300 glycosphingolipids (GSL). GSLs are a group of membrane components that have the lipid portion embedded in the outer plasma membrane leaflet and the sugar chains extended to the outer environment. Several lines of evidence suggest the importance of GSLs in various cellular processes such as differentiation, adhesion, proliferation, and cell-cell recognition. In pathogenic fungus Cryptococcus neoformans, glucosylceramide serves as an antigen that elicits an antibody response in patients and it is essential for fungal growth in host extracellular environment.
Probab=47.26 E-value=47 Score=37.05 Aligned_cols=102 Identities=17% Similarity=0.103 Sum_probs=65.5
Q ss_pred CCCcccccchhhhhcccccccccCCccchH-HHHhhhhhhHHHHhhcCCCCCCceEecccceeecccchhhhhhcccchh
Q 000171 1312 EGKPENQNHAIIFTRGEGLQTIDMNQDNYM-EEALKMRNLLQEFLKKHDGVRYPSILGLREHIFTGSVSSLAWFMSNQET 1390 (1946)
Q Consensus 1312 EGKpeNQNhAiiF~RGE~lQtIDmNQDnyl-eE~lKmrnlL~ef~~~~~g~~~~~IlG~RE~IFt~~v~~La~f~a~qE~ 1390 (1946)
.||..|.|+++-..+||++-.+|.. ..+ .++|+ .+++.+.. ..+.++|-+
T Consensus 72 ~~~~~~~n~g~~~a~~d~i~~~D~D--~~~~~~~l~--~l~~~~~~-----~~~~~v~~~-------------------- 122 (196)
T cd02520 72 NPKVNNLIKGYEEARYDILVISDSD--ISVPPDYLR--RMVAPLMD-----PGVGLVTCL-------------------- 122 (196)
T ss_pred CHhHHHHHHHHHhCCCCEEEEECCC--ceEChhHHH--HHHHHhhC-----CCCCeEEee--------------------
Confidence 3678889999999999999999874 332 33332 44555531 134455543
Q ss_pred hHHHHHHHhhcCccceeeeccCCcccccccccccCcccccccccccchhhhccccccccCcceeeeeeEEe
Q 000171 1391 SFVTIGQRLLANPLKVRFHYGHPDVFDRLFHLTRGGVSKASKIINLSEDIFAGFNSTLREGNVTHHEYIQV 1461 (1946)
Q Consensus 1391 sF~Tl~qR~la~Pl~~r~HYGHPD~fd~~f~~trGGiSKAsk~i~lsEDifaG~n~~lRgG~ith~EYiQ~ 1461 (1946)
...|+==.+.|-.+-.-||-+. -...+.||..-++....+|.+|.+++...+
T Consensus 123 -----------------~~~g~~~~~r~~~~~~~ggf~~--~~~~~~eD~~l~~rl~~~G~~i~~~~~~~~ 174 (196)
T cd02520 123 -----------------CAFGKSMALRREVLDAIGGFEA--FADYLAEDYFLGKLIWRLGYRVVLSPYVVM 174 (196)
T ss_pred -----------------cccCceeeeEHHHHHhccChHH--HhHHHHHHHHHHHHHHHcCCeEEEcchhee
Confidence 2233333445555555567632 123468999999999999999998877544
No 12
>PF12823 DUF3817: Domain of unknown function (DUF3817); InterPro: IPR023845 This domain is associated with, strictly bacterial integral membrane proteins. It occurs in proteins that on rare occasions are fused to transporter domains such as the major facilitator superfamily domain. Of three invariant residues, two occur as a His-Gly dipeptide in the middle of three predicted transmembrane helices.
Probab=33.64 E-value=1.3e+02 Score=31.11 Aligned_cols=68 Identities=16% Similarity=0.415 Sum_probs=47.3
Q ss_pred hhHHHHHHHHHHHHHhhhhcccccccccchhHHHHHHHHHHHHHHHHHHHHHHcccccHhHHHHHHH-HHHhhH
Q 000171 1787 YGVSWLVIFLVLFVMKTVSVGRRKFSANFQLVFRLIKGLIFLTFISILVTLIALPHMTVRDIIVCIL-AFMPTG 1859 (1946)
Q Consensus 1787 ~~~sw~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~l-a~~~~g 1859 (1946)
=|.||++++.+...+|...-.. ..-...=.+-|++|++.+.+.+.+..-.+|++......++ +++|.|
T Consensus 13 Egisll~Ll~iamplKy~~~~~-----~~v~~~G~iHG~lF~~Yl~~~~~~~~~~rW~~~~~~~~llas~iPfg 81 (92)
T PF12823_consen 13 EGISLLLLLFIAMPLKYLAGNP-----EAVKIIGPIHGFLFMLYLVAALDLASKYRWSLKRTLLALLASVIPFG 81 (92)
T ss_pred HHHHHHHHHHHHHHHHHHhCCC-----chhhhcchhHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHccccc
Confidence 3778888887777777643110 0112233478999999999999888999999998665554 477755
No 13
>CHL00032 ndhA NADH dehydrogenase subunit 1
Probab=33.58 E-value=4.2e+02 Score=33.83 Aligned_cols=27 Identities=30% Similarity=0.516 Sum_probs=21.3
Q ss_pred chHHHHHHHH--HHHHHHHHHHHHHHHHh
Q 000171 1878 FWGSVRTLAR--GYEIVMGLLLFTPVAFL 1904 (1946)
Q Consensus 1878 ~w~~v~~~a~--~~d~~~g~~~~~p~~~l 1904 (1946)
.=+++|+++- .||..++++++++....
T Consensus 158 ~iGa~R~~~q~isyEv~l~l~ii~~~l~~ 186 (363)
T CHL00032 158 FLGGLRAAAQSISYEIPLTLCVLSISLLS 186 (363)
T ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3467888874 79999999999987653
No 14
>TIGR03111 glyc2_xrt_Gpos1 putative glycosyltransferase TIGR03111. Members of this protein family probable glycosyltransferases of family 2, whose genes are near those for Gram-positive proteins (TIGR03110) related to the proposed exosortase (TIGR02602).
Probab=32.48 E-value=1.3e+02 Score=38.55 Aligned_cols=42 Identities=26% Similarity=0.453 Sum_probs=32.4
Q ss_pred CCCcccccchhhhhcccccccccCCccchHH-HHhhhhhhHHHHhhc
Q 000171 1312 EGKPENQNHAIIFTRGEGLQTIDMNQDNYME-EALKMRNLLQEFLKK 1357 (1946)
Q Consensus 1312 EGKpeNQNhAiiF~RGE~lQtIDmNQDnyle-E~lKmrnlL~ef~~~ 1357 (1946)
.||+.+-|+|+=.++||++=. |++|+.++ ++|+ ++++.|+++
T Consensus 117 ~Gka~AlN~gl~~s~g~~v~~--~DaD~~~~~d~L~--~l~~~f~~~ 159 (439)
T TIGR03111 117 QGKAKALNAAIYNSIGKYIIH--IDSDGKLHKDAIK--NMVTRFENN 159 (439)
T ss_pred CCHHHHHHHHHHHccCCEEEE--ECCCCCcChHHHH--HHHHHHHhC
Confidence 389999999999999999554 56788874 4554 788888743
No 15
>PF11457 DUF3021: Protein of unknown function (DUF3021); InterPro: IPR021560 This is a bacterial family of uncharacterised proteins.
Probab=29.32 E-value=5.7e+02 Score=27.49 Aligned_cols=86 Identities=20% Similarity=0.423 Sum_probs=47.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHcc------cccHhHHHHHHHHHHhhHHHHHHHHHHHhhhhhcccchHHHHHHHHHHH
Q 000171 1817 LVFRLIKGLIFLTFISILVTLIALP------HMTVRDIIVCILAFMPTGWGMLLIAQALKPVIHRAGFWGSVRTLARGYE 1890 (1946)
Q Consensus 1817 ~~~r~~~~~~~~~~~~~~~~~~~~~------~~~~~d~~~~~la~~~~gw~~~~i~~~~~~~~~~~~~w~~v~~~a~~~d 1890 (1946)
...+.+.++.+-.++.+++.++.-. ..+..++...+.+ +-.|...-..+. ..+. .-|...++ -..+
T Consensus 7 ~i~~~~iGi~ig~~i~li~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ig~~~gl~s~----if~~-e~~s~~~~--~iiH 78 (136)
T PF11457_consen 7 IIKGFLIGIGIGSFISLIISLFYGQGFYPSFPISVSSILSVLVA-VLIGAVFGLASL----IFEI-ERWSLLKQ--TIIH 78 (136)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccCCCcCCccHHHHHHHHHH-HHHHHHHHHHHH----HHcc-cchhHHHH--HHHH
Confidence 3445555555555555555444433 3344555555544 223322222222 2222 33554443 4688
Q ss_pred HHHHHHHHHHHHHhh-hcccc
Q 000171 1891 IVMGLLLFTPVAFLA-WFPFV 1910 (1946)
Q Consensus 1891 ~~~g~~~~~p~~~ls-~~p~~ 1910 (1946)
++...+++.|++.+. |+|.-
T Consensus 79 f~~~~~~~~~~~~~~gW~~~~ 99 (136)
T PF11457_consen 79 FIITYAIFLILAYLLGWFPLS 99 (136)
T ss_pred HHHHHHHHHHHHHHhCCcchh
Confidence 999999999999997 99984
No 16
>cd06421 CESA_CelA_like CESA_CelA_like are involved in the elongation of the glucan chain of cellulose. Family of proteins related to Agrobacterium tumefaciens CelA and Gluconacetobacter xylinus BscA. These proteins are involved in the elongation of the glucan chain of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues. They are putative catalytic subunit of cellulose synthase, which is a glycosyltransferase using UDP-glucose as the substrate. The catalytic subunit is an integral membrane protein with 6 transmembrane segments and it is postulated that the protein is anchored in the membrane at the N-terminal end.
Probab=29.13 E-value=40 Score=37.92 Aligned_cols=138 Identities=18% Similarity=0.133 Sum_probs=78.5
Q ss_pred CCCcccccchhhhhcccccccccCCccchHHHHhhhhhhHHHHhhcCCCCCCceEecccceeecccch-hhhhhcccchh
Q 000171 1312 EGKPENQNHAIIFTRGEGLQTIDMNQDNYMEEALKMRNLLQEFLKKHDGVRYPSILGLREHIFTGSVS-SLAWFMSNQET 1390 (1946)
Q Consensus 1312 EGKpeNQNhAiiF~RGE~lQtIDmNQDnyleE~lKmrnlL~ef~~~~~g~~~~~IlG~RE~IFt~~v~-~La~f~a~qE~ 1390 (1946)
-||.-|-|+|+=..+||++-++|. |.++++. .+.++++.+++. ..+.+++.+-+...++.. .+.........
T Consensus 70 ~~~~~~~n~~~~~a~~d~i~~lD~--D~~~~~~-~l~~l~~~~~~~----~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 142 (234)
T cd06421 70 HAKAGNLNNALAHTTGDFVAILDA--DHVPTPD-FLRRTLGYFLDD----PKVALVQTPQFFYNPDPFDWLADGAPNEQE 142 (234)
T ss_pred CCcHHHHHHHHHhCCCCEEEEEcc--ccCcCcc-HHHHHHHHHhcC----CCeEEEecceEEecCCcchhHHHHHHHHHH
Confidence 467888999999999999999986 7888653 556888888642 245566555443333321 12322222333
Q ss_pred hHHHHHHHhhcCccceeeeccCCcccccccccccCcccccccccccchhhhccccccccCcceeeeeeEEe
Q 000171 1391 SFVTIGQRLLANPLKVRFHYGHPDVFDRLFHLTRGGVSKASKIINLSEDIFAGFNSTLREGNVTHHEYIQV 1461 (1946)
Q Consensus 1391 sF~Tl~qR~la~Pl~~r~HYGHPD~fd~~f~~trGGiSKAsk~i~lsEDifaG~n~~lRgG~ith~EYiQ~ 1461 (1946)
.|.+..+... .+.++-.=-|.-=++.|..+..=||... ..+.||..-+......|.+|.+.....|
T Consensus 143 ~~~~~~~~~~-~~~~~~~~~g~~~~~r~~~~~~ig~~~~----~~~~eD~~l~~r~~~~g~~i~~~~~~~~ 208 (234)
T cd06421 143 LFYGVIQPGR-DRWGAAFCCGSGAVVRREALDEIGGFPT----DSVTEDLATSLRLHAKGWRSVYVPEPLA 208 (234)
T ss_pred HHHHHHHHHH-hhcCCceecCceeeEeHHHHHHhCCCCc----cceeccHHHHHHHHHcCceEEEecCccc
Confidence 3332211111 1011111113333344444444466542 2457999999999999999887665443
No 17
>KOG2033 consensus Low density lipoprotein B-like protein [Lipid transport and metabolism]
Probab=28.66 E-value=1.3e+02 Score=40.55 Aligned_cols=121 Identities=21% Similarity=0.264 Sum_probs=66.0
Q ss_pred eehhhhHHHHHHHHhhcCCCCCChhhHH-HHHHHHHHHHHhcCccc-cccCCCchhHhHHHHHHHHH-HHHHHHHHHHHH
Q 000171 59 RVAYLCRFYAFEKAHRLDPTSSGRGVRQ-FKTALLQRLERENAPTY-MERGKKSDAREMQSFYQHYY-KKYIQALQNAAD 135 (1946)
Q Consensus 59 ~VAY~Cr~YA~e~al~ld~~S~grgVrq-Fkt~LLd~LEq~k~~~l-k~~l~~~Da~~lq~fyq~Yv-E~fa~kLF~~Ad 135 (1946)
+.+|.||.+ |.+.+..+|.-.|-+.| |...||.++=..=+.-. .+..+-...+-+ |-|+ -+|+.+++...+
T Consensus 647 iqSfL~rl~--qeInrvggh~Lp~~vLQ~f~~sl~~k~~~~YE~l~~a~~~kasqn~aL----Qll~DLrfl~~Vl~~~~ 720 (863)
T KOG2033|consen 647 IQSFLQRLH--QEINRVGGHTLPPKVLQAFIQSLIGKLLCHYEGLAHAECTKASQNIAL----QLLFDLRFLERVLAISR 720 (863)
T ss_pred HHHHHHHHH--HHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHhhHH----HHHHHHHHHHHHHhcCc
Confidence 457777765 66777777776677665 77788777533111000 000100111112 2222 236666665444
Q ss_pred hh----h-------------------------HHHHHHHHHHHHHHHHHHHHccCCCCccchHHHHHHhhhhhhcccCCC
Q 000171 136 KA----D-------------------------RAQLTKAYQTANVLFEVLKAVNLTESMEVDREILEAQDKVAEKTQIYV 186 (1946)
Q Consensus 136 ~~----D-------------------------Ra~tak~F~tAsvLfeVL~~fg~~~~vev~~e~~~~~~~~~~k~~~~~ 186 (1946)
.+ | .++..+++.--+++|-|+..-... . .+.+.+-..-.
T Consensus 721 ~eR~~~DrI~~vt~qL~~~iDPfD~~~f~phl~~n~~r~~~R~~vlfG~~t~~~~q-~-----------a~~as~l~~~~ 788 (863)
T KOG2033|consen 721 EERTLYDRIHAVTNQLRDYIDPFDFELFAPHLTANVSRAASRLQVLFGVLTPAPSQ-G-----------AAAASSLAHEA 788 (863)
T ss_pred ccccchhHHHHHHHHHHHhcCchhHHhhhhHHHHHHHHHHHHHhhhheeecCCccc-c-----------chhhhhhhccC
Confidence 22 1 225677777778888877663222 1 11234455778
Q ss_pred CCccccCCCCc
Q 000171 187 PYNILPLDPDS 197 (1946)
Q Consensus 187 ~YNIlPl~~~~ 197 (1946)
+-||||+...|
T Consensus 789 ~~Nilplsss~ 799 (863)
T KOG2033|consen 789 DPNILPLSSSG 799 (863)
T ss_pred CCCccccccCC
Confidence 99999998776
No 18
>COG5116 RPN2 26S proteasome regulatory complex component [Posttranslational modification, protein turnover, chaperones]
Probab=26.46 E-value=73 Score=41.93 Aligned_cols=99 Identities=22% Similarity=0.353 Sum_probs=68.8
Q ss_pred hHHHHhHHHH------HhhccccccCChhhhhhhcccccCCCCCCcccCchhhhcCchhHHHHHhhhhcCCcHHHHHHhh
Q 000171 811 ARFAQLWNKV------ITSFREEDLISDREMNLLLVPYWADRDLGLIQWPPFLLASKIPIALDMAKDSNGKDRELKKRIE 884 (1946)
Q Consensus 811 ~~fs~vWNeI------I~S~reEdLis~~e~~lL~~p~~~~~~~~~i~wP~FLla~ki~~Ald~a~~~~~~d~~L~~~i~ 884 (1946)
.-.-|+|-|| |..||+.|=-++||+.-|.+. -+.-..|+.+.|+..|-..++ +-|-+.
T Consensus 30 ~~vDqlwpeIsddl~~Ie~lydd~sf~~remaaL~~S------------KvYy~LgeY~~Ai~yAL~agd--rfl~D~-- 93 (926)
T COG5116 30 AHVDQLWPEISDDLRYIEALYDDDSFDPREMAALCLS------------KVYYVLGEYQQAIEYALRAGD--RFLVDD-- 93 (926)
T ss_pred HHHHHhhhhhhchhhHHHHhhccCCCCHHHHHHHHHH------------HHHHHHHhHHHHHHHHHhcCC--ceeecC--
Confidence 4568999998 778999999999999988643 123445677888888865443 222221
Q ss_pred hchhhhHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHH
Q 000171 885 ADDYMSCAVKECYASFRNIIKFLVQGNEKRVIDDIFSEVDR 925 (1946)
Q Consensus 885 ~d~y~~~Av~e~y~~~~~il~~l~~~~~~~~i~~i~~~i~~ 925 (1946)
...|-..-|-.|-+..-|-....-.+.|+++|+++...|-+
T Consensus 94 ~S~y~etiv~k~iem~vh~~~~~y~~~~~d~iD~~l~~v~e 134 (926)
T COG5116 94 GSFYYETIVYKSIEMYVHMMDSAYIGGDKDIIDRILDFVLE 134 (926)
T ss_pred CccceehhHHhHHHHHHHHHHHhhhCCCcccchHHHHHHHH
Confidence 23455566777777777777777777788877777665544
No 19
>TIGR01667 YCCS_YHJK integral membrane protein, YccS/YhfK family. TMHMM on members of this model shows a consensus of 11 transmembrane helices separated into two clusters, an N-terminal cluster of 6 and a central cluster of 5. This would indicate two non-membrane domains one on each side of the membrane
Probab=24.78 E-value=8.7e+02 Score=33.73 Aligned_cols=41 Identities=17% Similarity=0.193 Sum_probs=24.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhccccchhhhhhhchhhccc
Q 000171 1884 TLARGYEIVMGLLLFTPVAFLAWFPFVSEFQTRMLFNQAFSR 1925 (1946)
Q Consensus 1884 ~~a~~~d~~~g~~~~~p~~~ls~~p~~~~~Qtr~lfn~afsr 1925 (1946)
.+.|..|.++|.++-.-...+ -+|--..-+-+-...+++..
T Consensus 502 a~~Rl~DTliG~~iA~~~~~l-lwP~w~~~~l~~~~~~al~a 542 (701)
T TIGR01667 502 ILPRLIDTLIGCLIAWGAVSY-LWPDWQSRLLRKMLHDALEA 542 (701)
T ss_pred HHHHHHHHHHHHHHHHHHHHH-cCCchHHHHHHHHHHHHHHH
Confidence 556999999998876544433 34654444444444444444
No 20
>COG1215 Glycosyltransferases, probably involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=23.46 E-value=77 Score=39.62 Aligned_cols=135 Identities=17% Similarity=0.136 Sum_probs=77.6
Q ss_pred eEEEeecCCCcccCCCCcccccchhhhhcccccccccCC---ccchHHHHhhhhhhHHHHhhcCCCCCCceEecccceee
Q 000171 1298 VIYRIKLPGPAILGEGKPENQNHAIIFTRGEGLQTIDMN---QDNYMEEALKMRNLLQEFLKKHDGVRYPSILGLREHIF 1374 (1946)
Q Consensus 1298 eiYrikLPG~pilGEGKpeNQNhAiiF~RGE~lQtIDmN---QDnyleE~lKmrnlL~ef~~~~~g~~~~~IlG~RE~IF 1374 (1946)
+.+++--| +.-..||+.++|.|+=..+||++=++|+. -.+++.|+.+ .|+....+ +++|.+.+..
T Consensus 111 ~~~~~~~~--~~~~~gK~~al~~~l~~~~~d~V~~~DaD~~~~~d~l~~~~~------~f~~~~~~----~v~~~~~~~~ 178 (439)
T COG1215 111 PNFRVIYP--EKKNGGKAGALNNGLKRAKGDVVVILDADTVPEPDALRELVS------PFEDPPVG----AVVGTPRIRN 178 (439)
T ss_pred cceEEEec--cccCccchHHHHHHHhhcCCCEEEEEcCCCCCChhHHHHHHh------hhcCCCee----EEeCCceeee
Confidence 34444433 57788999999999999999999999986 3566666555 77643312 5777665544
Q ss_pred ccc-chhhhhhcccchhhHHHHHHHhhcCccceeeeccCCcccccccccccCccccccc-----------ccccchhhhc
Q 000171 1375 TGS-VSSLAWFMSNQETSFVTIGQRLLANPLKVRFHYGHPDVFDRLFHLTRGGVSKASK-----------IINLSEDIFA 1442 (1946)
Q Consensus 1375 t~~-v~~La~f~a~qE~sF~Tl~qR~la~Pl~~r~HYGHPD~fd~~f~~trGGiSKAsk-----------~i~lsEDifa 1442 (1946)
... .+.++..-+.......-...+ .+...| ...+.+|.+.|=| .-.+.||.=-
T Consensus 179 ~~~~~~~l~~~~~~~~~~~~~~~~~-------~~~~~g--------~~~~~~G~~~~~rr~aL~~~g~~~~~~i~ED~~l 243 (439)
T COG1215 179 RPDPSNLLGRIQAIEYLSAFYFRLR-------AASKGG--------LISFLSGSSSAFRRSALEEVGGWLEDTITEDADL 243 (439)
T ss_pred cCChhhhcchhcchhhhhhHHHhhh-------hhhhcC--------CeEEEcceeeeEEHHHHHHhCCCCCCceeccHHH
Confidence 221 122222211111111111111 122333 3334444444433 2356788877
Q ss_pred cccccccCcceeeeeeE
Q 000171 1443 GFNSTLREGNVTHHEYI 1459 (1946)
Q Consensus 1443 G~n~~lRgG~ith~EYi 1459 (1946)
++=...+|.++.++.--
T Consensus 244 t~~l~~~G~~~~~~~~~ 260 (439)
T COG1215 244 TLRLHLRGYRVVYVPEA 260 (439)
T ss_pred HHHHHHCCCeEEEeecc
Confidence 87777899999987554
No 21
>PRK14716 bacteriophage N4 adsorption protein B; Provisional
Probab=22.88 E-value=81 Score=41.56 Aligned_cols=26 Identities=15% Similarity=-0.003 Sum_probs=23.7
Q ss_pred ccchhhhccccccccCcceeeeeeEE
Q 000171 1435 NLSEDIFAGFNSTLREGNVTHHEYIQ 1460 (1946)
Q Consensus 1435 ~lsEDifaG~n~~lRgG~ith~EYiQ 1460 (1946)
+|.||+--|+....+|.++.++.+--
T Consensus 260 sLTED~dLglRL~~~G~rv~y~p~ai 285 (504)
T PRK14716 260 SLTEDYDIGLRLKRAGFRQIFVRVRA 285 (504)
T ss_pred CcchHHHHHHHHHHCCCEEEEecccc
Confidence 79999999999999999999987753
No 22
>PF10569 Thiol-ester_cl: Alpha-macro-globulin thiol-ester bond-forming region; InterPro: IPR019565 This entry contains serum complement C3 and C4 precursors and alpha-macrogrobulins. The alpha-macroglobulin (aM) family of proteins includes protease inhibitors [], typified by the human tetrameric a2-macroglobulin (a2M); they belong to the MEROPS proteinase inhibitor family I39, clan IL. These protease inhibitors share several defining properties, which include (i) the ability to inhibit proteases from all catalytic classes, (ii) the presence of a 'bait region' and a thiol ester, (iii) a similar protease inhibitory mechanism and (iv) the inactivation of the inhibitory capacity by reaction of the thiol ester with small primary amines. aM protease inhibitors inhibit by steric hindrance []. The mechanism involves protease cleavage of the bait region, a segment of the aM that is particularly susceptible to proteolytic cleavage, which initiates a conformational change such that the aM collapses about the protease. In the resulting aM-protease complex, the active site of the protease is sterically shielded, thus substantially decreasing access to protein substrates. Two additional events occur as a consequence of bait region cleavage, namely (i) the h-cysteinyl-g-glutamyl thiol ester becomes highly reactive and (ii) a major conformational change exposes a conserved COOH-terminal receptor binding domain [] (RBD). RBD exposure allows the aM protease complex to bind to clearance receptors and be removed from circulation []. Tetrameric, dimeric, and, more recently, monomeric aM protease inhibitors have been identified [, ]. This short highly conserved region of proteinase-binding alpha-macro-globulins contains the cysteine and a glutamine of a thiol-ester bond that is cleaved at the moment of proteinase binding, and mediates the covalent binding of the alpha-macro-globulin to the proteinase. The GCGEQ motif is highly conserved. ; PDB: 2B39_B 2PN5_A 4ACQ_C 1HZF_A 2WIN_H 2I07_B 2ICF_B 2XWJ_D 3G6J_B 2NOJ_C ....
Probab=20.83 E-value=36 Score=28.70 Aligned_cols=11 Identities=55% Similarity=0.724 Sum_probs=8.2
Q ss_pred cCCCccccchh
Q 000171 1480 ANGNGEQTLSR 1490 (1946)
Q Consensus 1480 a~GnGEQ~lSR 1490 (1946)
=.|+|||++|+
T Consensus 9 P~GCgEQtm~~ 19 (31)
T PF10569_consen 9 PYGCGEQTMSS 19 (31)
T ss_dssp --SSTTHHHHH
T ss_pred CCCcHHHHHHH
Confidence 46999999987
No 23
>TIGR03472 HpnI hopanoid biosynthesis associated glycosyl transferase protein HpnI. This family of genes include a glycosyl transferase, group 2 domain (pfam00535) which are responsible, generally for the transfer of nucleotide-diphosphate sugars to substrates such as polysaccharides and lipids. The member of this clade from Acidithiobacillus ferrooxidans ATCC 23270 (AFE_0974) is found in the same locus as squalene-hopene cyclase (SHC, TIGR01507) and other genes associated with the biosynthesis of hopanoid natural products. Similarly, in Ralstonia eutropha JMP134 (Reut_B4902) this gene is adjacent to HpnAB, IspH and HpnH (TIGR03470), although SHC itself is elsewhere in the genome. Notably, this gene (here named HpnI) and three others form a conserved set (HpnIJKL) which occur in a subset of all genomes containing the SHC enzyme. This relationship was discerned using the method of partial phylogenetic profiling. This group includes Zymomonas mobilis, the organism where the initial hopano
Probab=20.45 E-value=2.8e+02 Score=34.80 Aligned_cols=130 Identities=15% Similarity=0.112 Sum_probs=66.1
Q ss_pred CCcccccchhhhhcccccccccCCccchH-HHHhhhhhhHHHHhhcCCCCCCceEecccceeecccchhh-hhhccc-ch
Q 000171 1313 GKPENQNHAIIFTRGEGLQTIDMNQDNYM-EEALKMRNLLQEFLKKHDGVRYPSILGLREHIFTGSVSSL-AWFMSN-QE 1389 (1946)
Q Consensus 1313 GKpeNQNhAiiF~RGE~lQtIDmNQDnyl-eE~lKmrnlL~ef~~~~~g~~~~~IlG~RE~IFt~~v~~L-a~f~a~-qE 1389 (1946)
||..|.++++=-.+||++=..|.+ ... .+.| +.+++.|+.. .+.+|+.. + ...+...+ +.+.+. .+
T Consensus 113 ~K~~~l~~~~~~a~ge~i~~~DaD--~~~~p~~L--~~lv~~~~~~-----~v~~V~~~-~-~~~~~~~~~~~l~~~~~~ 181 (373)
T TIGR03472 113 RKVSNLINMLPHARHDILVIADSD--ISVGPDYL--RQVVAPLADP-----DVGLVTCL-Y-RGRPVPGFWSRLGAMGIN 181 (373)
T ss_pred hHHHHHHHHHHhccCCEEEEECCC--CCcChhHH--HHHHHHhcCC-----CcceEecc-c-cCCCCCCHHHHHHHHHhh
Confidence 688899988888999999999985 333 3444 3667788532 22233221 1 11111111 111100 00
Q ss_pred hhHHHHHHHhhcCccceeeeccCCc--ccccccccccCcccccccccccchhhhccccccccCcceeeeee
Q 000171 1390 TSFVTIGQRLLANPLKVRFHYGHPD--VFDRLFHLTRGGVSKASKIINLSEDIFAGFNSTLREGNVTHHEY 1458 (1946)
Q Consensus 1390 ~sF~Tl~qR~la~Pl~~r~HYGHPD--~fd~~f~~trGGiSKAsk~i~lsEDifaG~n~~lRgG~ith~EY 1458 (1946)
..|.-. -..+.+++ +...++.- .+-|.....-||...- .-++.||..-|.....+|.+|..++.
T Consensus 182 ~~~~~~--~~~~~~~~-~~~~~~G~~~a~RR~~l~~iGGf~~~--~~~~~ED~~l~~~i~~~G~~v~~~~~ 247 (373)
T TIGR03472 182 HNFLPS--VMVARALG-RARFCFGATMALRRATLEAIGGLAAL--AHHLADDYWLGELVRALGLRVVLAPV 247 (373)
T ss_pred hhhhHH--HHHHHhcc-CCccccChhhheeHHHHHHcCChHHh--cccchHHHHHHHHHHHcCCeEEecch
Confidence 011000 00111111 11112221 3444445556777421 12467999999999999999987643
Done!